Sequence	Length	Modifications	Modified sequence	Carbamidomethyl (C) Probabilities	Oxidation (M) Probabilities	Carbamidomethyl (C) Score Diffs	Oxidation (M) Score Diffs	Acetyl (Protein N-term)	Carbamidomethyl (C)	Oxidation (M)	Missed cleavages	Proteins	Leading proteins	Leading razor protein	Type	Raw file	Experiment	MS/MS m/z	Charge	m/z	Mass	Uncalibrated - Calibrated m/z [ppm]	Uncalibrated - Calibrated m/z [Da]	Mass error [ppm]	Mass error [Da]	Uncalibrated mass error [ppm]	Uncalibrated mass error [Da]	Max intensity m/z 0	Retention time	Retention length	Calibrated retention time	Calibrated retention time start	Calibrated retention time finish	Retention time calibration	Match time difference	Match m/z difference	Match q-value	Match score	Number of data points	Number of scans	Number of isotopic peaks	PIF	Fraction of total spectrum	Base peak fraction	PEP	MS/MS count	MS/MS scan number	MS/MS scan numbers	MS3 scan numbers	Score	Delta score	Combinatorics	Intensity	Reverse	Potential contaminant	id	Protein group IDs	Peptide ID	Mod. peptide ID	MS/MS IDs	Best MS/MS	Carbamidomethyl (C) site IDs	Oxidation (M) site IDs	Taxonomy IDs	Taxonomy names	Mass deficit
AAADIFKHY	9	Unmodified	_AAADIFKHY_					0	0	0		nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	nc|ENSG00000118007|Q8WVM7-2|STAG1	nc|ENSG00000118007|Q8WVM7-2|STAG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.2385131716728	3	345.846787	1034.51853	-0.089501	-3.0954E-05	-1.2903	-0.00044624	-1.3798	-0.00047719	345.84635363127336	26.885	0.24125	28.156	27.963	28.205	1.2715					13	7	2	0	0	0	0.11216	1	11230	11230		11.495	5.2889	1	762530			0	2027	0	0	0	0					0.002651872717478909
AAADIVNFL	9	Unmodified	_AAADIVNFL_					0	0	0		ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5073730349541	1	933.504009	932.496732	3.4595	0.0032295	0.49629	0.00046329	3.9558	0.0036928	933.5047869965746	74.759	0.33862	76.065	75.876	76.214	1.3063					24	10	3	0	0	0	0.059546	1	31351	31351		64.236	9.4628	1	2489900			1	5319	1	1	1	1					0.027783825231722403
AAADIVNFL	9	Unmodified	_AAADIVNFL_					0	0	0		ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	933.5092040896416	1	933.504009	932.496732	3.1563	0.0029464	0.76022	0.00070967	3.9165	0.0036561	933.5053424230726	74.27	0.34171	76.066	75.9	76.242	1.7962					17	10	2	0	0	0	0.042029	1	31157	31157		74.423	10.186	1	2693800			2	5319	1	1	2	2					0.027783825231722403
AAADIVNFL	9	Unmodified	_AAADIVNFL_					0	0	0		ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2578613162041	2	467.255643	932.496732	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.199	1	75.995	75.495	76.495	1.7962								0	0	0	0.22015	1	31128	31128		24.674	6.5389	1				3	5319	1	1	3	3					0.027783825231722403
AAADIVNFL	9	Unmodified	_AAADIVNFL_					0	0	0		ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	ENSG00000236104|ENST00000431845|ZBTB22	MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2569457888603	2	467.255643	932.496732	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.331	1	76.127	75.627	76.627	1.7962								0	0	0	0.22015	1	31183	31183		24.674	6.5389	1				4	5319	1	1	4	4					0.027783825231722403
AAADSIKIW	9	Unmodified	_AAADSIKIW_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7700073122978	2	487.768917	973.523281	2.2837	0.0011139	-0.1867	-9.1066E-05	2.097	0.0010228	487.76882741241104	44.052	0.34359	45.406	45.222	45.565	1.3536					29	10	4	0	0	0	0.019486	2	18483	18432;18483		99.755	57.661	1	3575400			5	782	2	2	5;6	6					0.035460714145074235
AAADSIKIW	9	Unmodified	_AAADSIKIW_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7693054080009	2	487.768917	973.523281	2.0587	0.0010042	-1.3046	-0.00063632	0.75416	0.00036786	487.76819283775853	43.401	0.31984	45.345	45.165	45.485	1.9438					26	10	3	0	0	0	0.014947	3	18202	18157;18202;18248		103.42	53.486	1	3805000			6	782	2	2	7;8;9	8					0.035460714145074235
AAAERARKQA	10	Unmodified	_AAAERARKQA_					0	0	0		nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000133392|P35749-4|MYH11	nc|ENSG00000133392|P35749-4|MYH11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.2431518435478	3	357.872106	1070.59449	0.72435	0.00025922	0.77948	0.00027895	1.5038	0.00053818	357.87228135552994	46.826	0.50578	48.209	47.84	48.346	1.3825					25	15	2	0	0	0	0.1253	1	19642	19642		7.4771	0	1	401280			7	2569	3	3	10	10					0.06201584171913055
AAAGFLLQV	9	Unmodified	_AAAGFLLQV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276;nc|ENSG00000291317|P0DTL6-1|ZFTRAF1	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	889.5208618044853	1	889.51418	888.506903	2.6006	0.0023132	1.5298	0.0013608	4.1304	0.003674	889.5159758072873	69.977	0.34238	71.33	71.179	71.521	1.3536					17	10	2	0	0	0	0.15478	1	29372	29372		38.151	3.9638	1	1100100			8	8023	4	4	11	11					0.058189902484286904
AAAGFLLQV	9	Unmodified	_AAAGFLLQV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276;nc|ENSG00000291317|P0DTL6-1|ZFTRAF1	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1208984255791	2	445.260728	888.506903	2.9844	0.0013288	-0.20258	-9.02E-05	2.7818	0.0012386	445.2605570470983	70.047	0.37377	71.401	71.147	71.521	1.3536					20	11	2	0	0	0	0.10306	1	29408	29408		13.508	0	1	1432600			9	8023	4	4	12	12					0.058189902484286904
AAAHFYFEL	9	Unmodified	_AAAHFYFEL_					0	0	0		VCL-KIAA0913|1|fusion;VCL-KIAA0913|3|fusion;VCL-KIAA0913|2|fusion;ENST00000433366.6_1_10:75557251-75561274:+|nuORF;nc|ENSG00000214655|A7E2V4-5|ZSWIM8;ENSG00000214655|ENST00000604729|ZSWIM8;nc|ENSG00000214655|A7E2V4|ZSWIM8;nc|ENSG00000214655|A7E2V4-3|ZSWIM8;nc|ENSG00000214655|A7E2V4-4|ZSWIM8;nc|ENSG00000214655|A7E2V4-2|ZSWIM8	VCL-KIAA0913|1|fusion	VCL-KIAA0913|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7627441287041	2	534.761092	1067.50763	2.9858	0.0015967	0.29717	0.00015892	3.2829	0.0017556	534.7611866073115	61.963	0.6345	63.381	63.113	63.747	1.4177					57	19	4	0	0	0	0.28226	1	26032	26032		26.341	12.833	1	6523400			10	17354	5	5	13	13					-0.023422151025442872
AAAHFYFEL	9	Unmodified	_AAAHFYFEL_					0	0	0		VCL-KIAA0913|1|fusion;VCL-KIAA0913|3|fusion;VCL-KIAA0913|2|fusion;ENST00000433366.6_1_10:75557251-75561274:+|nuORF;nc|ENSG00000214655|A7E2V4-5|ZSWIM8;ENSG00000214655|ENST00000604729|ZSWIM8;nc|ENSG00000214655|A7E2V4|ZSWIM8;nc|ENSG00000214655|A7E2V4-3|ZSWIM8;nc|ENSG00000214655|A7E2V4-4|ZSWIM8;nc|ENSG00000214655|A7E2V4-2|ZSWIM8	VCL-KIAA0913|1|fusion	VCL-KIAA0913|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	534.761092	1067.50763	2.4046	0.0012859	0.97685	0.00052238	3.3815	0.0018083	534.7613586210562	61.334	0.62993	63.291	63.089	63.719	1.9571	-0.044833	0.00045705	NaN	26.341	53	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6695500			11	17354	5	5							-0.023422151025442872
AAAHHCRR	8	Unmodified	_AAAHHCRR_					0	0	0			REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	921.4615356326103	1	921.458413	920.451136	2.8066	0.0025862	-0.66715	-0.00061475	2.1395	0.0019715	921.4586025781548	105.08	0.090164	105.14	105.1	105.19	0.056801					9	3	3	0	0	0	0.89008	1	44478	44478		2.5775	0.27475	1	44586000	+		12	13233	6	6	14	14					-0.012271214201859948
AAAHHCRR	8	Unmodified	_AAAHHCRR_					0	0	0			REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	921.458413	920.451136	2.8066	0.0025862	-0.66715	-0.00061475	2.1395	0.0019715	921.4586025781548	105.08	0.090164	105.14	105.1	105.19	0.056801	-0.011436	-0.00027013	NaN	2.5775	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44586000	+		13	13233	6	6							-0.012271214201859948
AAAHHCRR	8	Unmodified	_AAAHHCRR_					0	0	0			REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	921.458413	920.451136	3.1243	0.002879	0.054962	5.0645E-05	3.1793	0.0029296	921.4590676255394	104.96	0.077721	105.11	105.04	105.12	0.15859	-0.036964	0.00039527	NaN	2.5775	10	3	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40880000	+		14	13233	6	6							-0.012271214201859948
AAAHHCRR	8	Unmodified	_AAAHHCRR_					0	0	0			REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	REV__ENST00000465307.6_1_11:3829280-3844905:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	921.458413	920.451136	3.2846	0.0030266	-0.38027	-0.0003504	2.9043	0.0026762	921.4586475165675	105.03	0.11516	105.2	105.14	105.26	0.16679	0.0484	-5.7762E-06	NaN	2.5775	14	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	173870000	+		15	13233	6	6							-0.012271214201859948
AAAIRSLRLRE	11	Unmodified	_AAAIRSLRLRE_					0	0	0		ENST00000547085.1_1_12:112600816-112607652:-|nuORF;nc|ENSG00000173064|Q9Y4D8-4|HECTD4;nc|ENSG00000173064|Q9Y4D8|HECTD4;ENSG00000173064|ENST00000682272|HECTD4	ENST00000547085.1_1_12:112600816-112607652:-|nuORF	ENST00000547085.1_1_12:112600816-112607652:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3841430544853	2	628.383303	1254.75205	2.0099	0.001263	-0.69703	-0.000438	1.3129	0.00082499	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	1.0357	1	31936	31936		1.4819	0	1	2978200			16	4264	7	7	15	15					0.13486663711228175
AAAKKPQHR	9	Unmodified	_AAAKKPQHR_					0	0	0		ENST00000505295.1_1_5:80540896-80542784:-|nuORF	ENST00000505295.1_1_5:80540896-80542784:-|nuORF	ENST00000505295.1_1_5:80540896-80542784:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.2020751833916	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.162	1	33.442	32.942	33.942	1.2796								0	0	0	0.42693	1	13492	13492		0.26902	0	1				17	7001	8	8	16	16					0.08062806868417738
AAALIHAGVVP	11	Unmodified	_AAALIHAGVVP_					0	0	0		ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8040649294853	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.264	1	67.264	66.764	67.764	0								0	0	0	0.63775	1	28017	28017		1.4819	0.68827	1				18	5715	9	9	17	17					0.08902039576844345
AAALIHAGVVP	11	Unmodified	_AAALIHAGVVP_					0	0	0		ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8048889040947	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.379	1	67.379	66.879	67.879	0								0	0	0	0.63775	1	28066	28066		1.4819	0.68827	1				19	5715	9	9	18	18					0.08902039576844345
AAALIHAGVVP	11	Unmodified	_AAALIHAGVVP_					0	0	0		ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	ENST00000286827.7_1_21:32513514-32519253:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8040038943291	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	1.0357	2	28841	28841;28891		1.4819	0.68827	1	1556700			20	5715	9	9	19;20	19					0.08902039576844345
AAALPAFVAL	10	Unmodified	_AAALPAFVAL_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK;PTPRK-C11orf48|1|fusion;ENST00000368202.4_1_6:128840173-128841710:-|nuORF;ENST00000524534.5_1_6:128384662-128841530:-|nuORF;ENST00000524481.5_1_6:128321419-128841710:-|nuORF	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2853881716728	2	472.284203	942.553853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.289	1	85.448	84.948	85.948	1.159								0	0	0	0.65703	1	35370	35370		7.9102	0	1				21	3341	10	10	21	21					0.08027849799555042
AAAPKLRA	8	Unmodified	_AAAPKLRA_					0	0	0		ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2525512576103	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.665	1	27.936	27.436	28.436	0.27119								0	0	0	1.0178	1	11568	11568		5.2307	0.47466	1				22	4208	11	11	22	22					0.08553543171092315
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2855712771416	2	448.284203	894.553853	2.0498	0.0009189	0.50522	0.00022648	2.555	0.0011454	448.2842776209404	67.453	0.70746	68.831	68.299	69.007	1.3778					51	22	3	0	0	0	0.10722	3	28317	28181;28269;28317		46.921	6.4723	1	2846800			23	2423	12	12	23;24;25	25					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	895.5570556521416	1	895.56113	894.553853	1.6164	0.0014476	-0.15556	-0.00013932	1.4608	0.0013083	895.5616733359641	67.494	0.73312	68.872	68.332	69.065	1.3778					30	23	2	0	0	0	0.12174	1	28286	28286		42.095	1.646	1	815860			24	2423	12	12	26	26					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2852050662041	2	448.284203	894.553853	2.2607	0.0010134	0.86418	0.0003874	3.1248	0.0014008	448.2846590651614	68.001	0.69944	69.378	69.007	69.706	1.3778					54	22	3	0	0	0	0.069258	4	28499	28451;28499;28549;28593		60.39	14.804	1	9984500			25	2423	12	12	27;28;29;30	28					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	895.5641967654228	1	895.56113	894.553853	1.818	0.0016281	-0.16729	-0.00014982	1.6507	0.0014783	895.5609359057053	68.033	0.48763	69.41	69.065	69.553	1.3778					35	15	3	0	0	0	0.069258	3	28553	28455;28507;28553		60.39	19.941	1	3399400			26	2423	12	12	31;32;33	33					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2855102419853	2	448.284203	894.553853	1.5251	0.00068369	0.43925	0.00019691	1.9644	0.00088059	448.28419700705126	67.047	0.7707	68.936	68.278	69.048	1.8889					57	24	3	0	0	0	0.087207	4	28124	27919;28006;28055;28124		53.576	13.477	1	3599200			27	2423	12	12	34;35;36;37	37					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2855407595634	2	448.284203	894.553853	1.58	0.0007083	1.6893	0.0007573	3.2694	0.0014656	448.2851171565862	67.432	0.67491	69.302	68.999	69.674	1.87					49	21	3	0	0	0	0.087207	3	28303	28206;28253;28303		53.576	10.608	1	4105400			28	2423	12	12	38;39;40	40					0.10235849799573771
AAAPQLLIV	9	Unmodified	_AAAPQLLIV_					0	0	0		nc|ENSG00000130303|Q10589-2|BST2;ENSG00000130303|ENST00000252593|BST2	nc|ENSG00000130303|Q10589-2|BST2	nc|ENSG00000130303|Q10589-2|BST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	895.5607787966728	1	895.56113	894.553853	1.2048	0.001079	-0.49565	-0.00044388	0.70915	0.00063509	895.560698672428	67.423	0.49011	69.293	68.999	69.489	1.87					28	15	2	0	0	0	0.09539	1	28289	28289		50.855	2.5092	1	2139400			29	2423	12	12	41	41					0.10235849799573771
AAASIANIV	9	Unmodified	_AAASIANIV_					0	0	0		ENSG00000120438|ENST00000321394|TCP1;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000545764.1_1_6:160208906-160209185:-|nuORF;ENST00000536607.1_1_6:160208906-160210500:-|nuORF	ENSG00000120438|ENST00000321394|TCP1	ENSG00000120438|ENST00000321394|TCP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2431213259697	2	415.242535	828.470518	2.0848	0.00086568	-1.6925	-0.00070281	0.39222	0.00016287	415.2417924486168	47.713	0.28183	49.095	48.922	49.204	1.3825					14	8	2	0	0	0	0.087207	1	19979	19979		53.576	19.473	1	1983100			30	2103	13	13	42	42					0.04942113351705757
AAASIANIV	9	Unmodified	_AAASIANIV_					0	0	0		ENSG00000120438|ENST00000321394|TCP1;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000545764.1_1_6:160208906-160209185:-|nuORF;ENST00000536607.1_1_6:160208906-160210500:-|nuORF	ENSG00000120438|ENST00000321394|TCP1	ENSG00000120438|ENST00000321394|TCP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2429992556572	2	415.242535	828.470518	2.4478	0.0010164	-1.3319	-0.00055306	1.1159	0.00046337	415.24190883330016	47.188	0.27995	49.164	49.031	49.311	1.976					14	8	2	0	0	0	0.051699	1	19774	19774		67.344	27.387	1	1791900			31	2103	13	13	43	43					0.04942113351705757
AAASLIRLV	9	Unmodified	_AAASLIRLV_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	457.2950012087822	2	457.295102	912.575651	2.6858	0.0012282	-1.6378	-0.00074896	1.048	0.00047925	457.2951751310718	50.331	0.7084	51.725	51.518	52.226	1.3938					31	22	2	0	0	0	0.0069529	1	21068	21068		114.65	35.921	1	6178700			32	5001	14	14	44	44					0.11586654548125352
AAASLIRLV	9	Unmodified	_AAASLIRLV_					0	0	0		ENSG00000197386|ENST00000355072|HTT;ENST00000510626.5_1_4:3131970-3189635:+|nuORF	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	457.295102	912.575651	1.9149	0.00087569	-3.5507	-0.0016237	-1.6358	-0.00074803	457.2937408060524	49.776	0.37697	51.753	51.537	51.914	1.9772	0.014208	-0.00037031	NaN	114.65	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4722100			33	5001	14	14							0.11586654548125352
AAAVKVVP	8	Unmodified	_AAAVKVVP_					0	0	0		ANKRD30A|p.K1183Sfs*12|1|0.04|ENSG00000148513|chr10:37219257-37219258|-/GTCATTTG|frameshift_variant;ANKRD30A|p.L1182Yfs*15|1|0.04|ENSG00000148513|chr10:37219256-37219257|-/A|frameshift_variant;ENSG00000148513|ENST00000361713|ANKRD30A	ANKRD30A|p.K1183Sfs*12|1|0.04|ENSG00000148513|chr10:37219257-37219258|-/GTCATTTG|frameshift_variant	ANKRD30A|p.K1183Sfs*12|1|0.04|ENSG00000148513|chr10:37219257-37219258|-/GTCATTTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7465698122978	2	377.744714	753.474875	1.4494	0.0005475	2.5906	0.00097859	4.04	0.0015261	377.74600072573423	68.432	0.81116	68.754	68.377	69.188	0.32224					55	25	3	0	0	0	0.89176	1	28711	28711		0.79363	0	1	4671300			34	64	15	15	45	45					0.0882762256528622
AAAWCRPWWR	10	Unmodified	_AAAWCRPWWR_					0	0	0			REV__ENST00000298743.8_1_9:89561621-89561816:-|nuORF	REV__ENST00000298743.8_1_9:89561621-89561816:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825866580009	3	434.881948	1301.62402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.623	1	14.451	13.951	14.951	0.82789								0	0	0	0.66222	1	5648	5648		0.69767	0	1		+		35	12306	16	16	46	46					-0.014731750836517676
AACARKFR	8	Unmodified	_AACARKFR_					0	0	0		ENST00000479852.1_1_1:227170717-227171625:+|nuORF;ENST00000478406.5_1_1:227171346-227171625:+|nuORF;nc|ENSG00000163050|Q8NI60-4|COQ8A;ENST00000485462.5_1_1:227165121-227174435:+|nuORF;nc|ENSG00000163050|Q8NI60-3|COQ8A;ENSG00000163050|ENST00000366777|COQ8A	ENST00000479852.1_1_1:227170717-227171625:+|nuORF	ENST00000479852.1_1_1:227170717-227171625:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.2072021365166	3	308.17284	921.49669	1.6635	0.00051263	0.58187	0.00017932	2.2453	0.00069195	308.1726271462884	73.685	0.19345	74.01	73.912	74.105	0.32494					6	5	2	0	0	0	2.3239	1	30825	30825		0	0	1	81993			36	3659	17	17	47	47					0.03280104042198673
AACCCYCK	8	Unmodified	_AACCCYCK_					0	0	0			REV__ENST00000515408.5_1_5:112351033-112351294:+|nuORF	REV__ENST00000515408.5_1_5:112351033-112351294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	864.2889892458916	1	864.287098	863.279822	1.2548	0.0010845	0.97745	0.00084479	2.2322	0.0019293	864.2876422025707	98.777	0.11057	98.777	98.737	98.848	0					5	3	2	0	0	0	0.89176	1	41332	41332		0.79363	0	1	12514000	+		37	13598	18	18	48	48					-0.15728698889540738
AACCFPGRS	9	Unmodified	_AACCFPGRS_					0	0	0		ENST00000508997.1_1_4:129752705-129752914:+|nuORF;ENST00000512960.5_1_4:129731428-129752914:+|nuORF;ENST00000503785.5_1_4:129731189-129752914:+|nuORF;ENST00000226319.10_1_4:129730900-129752914:+|nuORF	ENST00000508997.1_1_4:129752705-129752914:+|nuORF	ENST00000508997.1_1_4:129752705-129752914:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.1975890994072	2	456.196748	910.378942	1.1287	0.00051493	-0.016539	-7.5449E-06	1.1122	0.00050738	456.1967467611197	52.653	0.34477	54.049	53.836	54.18	1.3966					17	10	2	0	0	0	0.77526	1	22031	22031		4.3292	1.44	1	2349000			38	5538	19	19	49	49					-0.07983216608761268
AACCFPGRS	9	Unmodified	_AACCFPGRS_					0	0	0		ENST00000508997.1_1_4:129752705-129752914:+|nuORF;ENST00000512960.5_1_4:129731428-129752914:+|nuORF;ENST00000503785.5_1_4:129731189-129752914:+|nuORF;ENST00000226319.10_1_4:129730900-129752914:+|nuORF	ENST00000508997.1_1_4:129752705-129752914:+|nuORF	ENST00000508997.1_1_4:129752705-129752914:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.1993591189384	2	456.196748	910.378942	1.6482	0.0007519	0.98522	0.00044946	2.6334	0.0012014	456.1971465174034	52.09	0.33817	54.062	53.862	54.2	1.9722					18	10	2	0	0	0	0.77526	1	21798	21798		4.3292	0	1	2135900			39	5538	19	19	50	50					-0.07983216608761268
AACVSGFV	8	Unmodified	_AACVSGFV_					0	0	0			REV__ENSG00000142700|ENST00000404795|DMRTA2	REV__ENSG00000142700|ENST00000404795|DMRTA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.2675659060478	2	377.183632	752.352711	-0.85437	-0.00032226	0.1281	4.8317E-05	-0.72627	-0.00027394	377.18376420553926	13.854	0.24674	14.581	14.472	14.719	0.72639					10	7	2	0	0	0	2.3239	1	5803	5803		2.8892	0	1	442270	+		40	10189	20	20	51	51					-0.03337162508591973
AACWRPTHICI	11	Unmodified	_AACWRPTHICI_					0	0	0			REV__L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|165|1|anti-sense	REV__L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|165|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	424.2125121951103	3	424.210966	1269.61107	1.83	0.0007763	2.8585	0.0012126	4.6884	0.0019889	424.2123459399599	37.3	0.26024	37.605	37.535	37.795	0.30497					19	11	2	0	0	0	0.93873	1	15700	15700		7.4771	0.84669	1	1037300	+		41	14303	21	21	52	52					-0.012953742580066319
AAENEFVVL	9	Unmodified	_AAENEFVVL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q6IME9;ENSG00000170486|ENST00000293745|KRT72;CON__Q14CN4-1;nc|ENSG00000170486|Q14CN4-2|KRT72;nc|ENSG00000170486|Q14CN4-3|KRT72;ENST00000546453.1_1_12:53215658-53224087:-|nuORF;ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	CON__P08729;ENSG00000185640|ENST00000330553|KRT79	CON__P08729	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2604247927666	2	496.258382	990.502212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.956	1	61.925	61.425	62.425	1.969								0	0	0	0.3792	1	25161	25161		10.824	0.75	1			+	42	345;362	22	22	53	53					0.006580613150163117
AAEPVEILK	9	Unmodified	_AAEPVEILK_					0	0	0		tr|A0A7D7A136|A0A7D7A136_9CLOT4-hydroxybutyrate--acetyl-CoACoAtransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12420PE=3SV=1	tr|A0A7D7A136|A0A7D7A136_9CLOT4-hydroxybutyrate--acetyl-CoACoAtransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12420PE=3SV=1	tr|A0A7D7A136|A0A7D7A136_9CLOT4-hydroxybutyrate--acetyl-CoACoAtransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12420PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2873718142509	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.246	1	19.694	19.194	20.194	1.448								0	0	0	0.42693	1	7589	7589		4.756	1.8668	1				43	17230	23	23	54	54					0.06871224728763536
AAEPVLKE	8	Unmodified	_AAEPVLKE_					0	0	0			REV__nc|ENSG00000018189|Q7L099|RUFY3	REV__nc|ENSG00000018189|Q7L099|RUFY3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.7435790896416	2	428.742368	855.470183	0.97143	0.00041649	3.0149	0.0012926	3.9863	0.0017091	428.7436537289493	52.705	0.56647	54.101	53.743	54.31	1.3966					32	17	2	0	0	0	0.88587	1	22076	22076		5.2307	0	1	5679700	+		44	8549	24	24	55	55					0.03666693631862472
AAERQIAEL	9	Unmodified	_AAERQIAEL_					0	0	0		ENSG00000203724|ENST00000367393|C1orf53	ENSG00000203724|ENST00000367393|C1orf53	ENSG00000203724|ENST00000367393|C1orf53	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1862365603447	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.111	1	77.405	76.905	77.905	1.2938								0	0	0	0.42693	1	31948	31948		1.1933	0	1				45	5114	25	25	56	56					0.03512268437862076
AAFAYTVKY	9	Unmodified	_AAFAYTVKY_					0	0	0		ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;ENSG00000160087|ENST00000349431|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2698852419853	2	517.271293	1032.52803	0.46023	0.00023806	-0.90813	-0.00046975	-0.4479	-0.00023168	517.2703862036149	36.968	0.38466	38.244	38.02	38.404	1.2762					59	25	3	0	0	0	0.010279	2	15554	15515;15554		107.19	67.23	1	14038000			46	3542	26	26	57;58	58					0.013069555572883473
AAFAYTVKY	9	Unmodified	_AAFAYTVKY_					0	0	0		ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;ENSG00000160087|ENST00000349431|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2712280154228	2	517.271293	1032.52803	0.93448	0.00048338	-0.50368	-0.00026054	0.4308	0.00022284	517.2707335979429	36.356	0.31352	38.173	37.976	38.289	1.8176					56	24	3	0	0	0	0.010279	2	15225	15225;15264		107.19	74.401	1	17027000			47	3542	26	26	59;60	59					0.013069555572883473
AAFDGGFTV	9	Unmodified	_AAFDGGFTV_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2;ENST00000564259.1_1_16:48382051-48395504:+|nuORF	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.4113647341728	1	884.414859	883.407583	1.1101	0.00098181	-2.7246	-0.0024097	-1.6145	-0.0014279	884.4124373493675	53.722	0.28358	55.123	55.033	55.317	1.4005					16	10	2	0	0	0	0.03795	1	22485	22485		77.984	24.409	1	2008700			48	1404	27	27	61	61					-0.03878452436322277
AAFDPYKFV	9	Unmodified	_AAFDPYKFV_					0	0	0			REV__ENST00000461652.2_1_13:31835091-31857210:+|nuORF	REV__ENST00000461652.2_1_13:31835091-31857210:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.2716552615166	2	529.271293	1056.52803	2.1035	0.0011133	-3.7764	-0.0019987	-1.6729	-0.00088543	529.2689344738438	81.523	0.3526	81.523	81.349	81.701	0					19	11	2	0	0	0	0.83213	1	33931	33931		2.0598	0.21551	1	2166000	+		49	11544	28	28	62	62					0.002029555572789832
AAFFKSSN	8	Unmodified	_AAFFKSSN_					0	0	0		nc|ENSG00000163006|Q96M89-2|CCDC138;ENSG00000163006|ENST00000295124|CCDC138	nc|ENSG00000163006|Q96M89-2|CCDC138	nc|ENSG00000163006|Q96M89-2|CCDC138	MSMS	GG20161007_CRH_Patient100_W632_02	4	436.2187988162041	2	436.21906	870.423567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.911	1	83.581	83.081	84.081	1.67								0	0	0	1.0178	1	34365	34365		0.79363	0.10326	1				50	3657	29	29	63	63					-0.016827461994353143
AAFHEEFVV	9	Unmodified	_AAFHEEFVV_					0	0	0		FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant;nc|ENSG00000114416|P51114-3|FXR1;nc|ENSG00000114416|P51114-2|FXR1;ENSG00000114416|ENST00000357559|FXR1	FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant	FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7600585818291	2	524.758549	1047.50255	2.0374	0.0010692	-0.43091	-0.00022612	1.6065	0.00084303	524.7590123407992	43.64	0.48914	44.994	44.765	45.254	1.3536					39	15	4	0	0	0	0.061246	1	18326	18326		63.563	38.889	1	10108000			51	1864	30	30	64	64					-0.019305189651277033
AAFHEEFVV	9	Unmodified	_AAFHEEFVV_					0	0	0		FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant;nc|ENSG00000114416|P51114-3|FXR1;nc|ENSG00000114416|P51114-2|FXR1;ENSG00000114416|ENST00000357559|FXR1	FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant	FXR1|p.T411Nfs*4|1|0.24|ENSG00000114416|chr3:180968080-180968081|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.7594482302666	2	524.758549	1047.50255	1.9525	0.0010246	-1.1091	-0.000582	0.84342	0.00044259	524.758738261225	43.053	0.51122	44.974	44.751	45.262	1.9211					39	16	4	0	0	0	0.087207	3	18024	17977;18024;18075		53.576	28.902	1	9611200			52	1864	30	30	65;66;67	66					-0.019305189651277033
AAFLKAIGY	9	Unmodified	_AAFLKAIGY_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.2771179080009	2	477.276378	952.538203	2.0796	0.00099256	0.22627	0.00010799	2.3059	0.0011006	477.27639731405196	47.989	0.47084	49.377	49.147	49.618	1.388					46	14	4	0	0	0	0.026628	2	20055	20055;20105		92.822	30.249	1	26160000			53	1926	31	31	68;69	68					0.060035632825247376
AAFLKAIGY	9	Unmodified	_AAFLKAIGY_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.2776061892509	2	477.276378	952.538203	2.6749	0.0012767	-0.1551	-7.4028E-05	2.5198	0.0012026	477.2761702278654	47.535	0.46256	49.511	49.25	49.713	1.976					56	14	5	0	0	0	0.026628	2	19860	19860;19912		92.822	30.249	1	27953000			54	1926	31	31	70;71	70					0.060035632825247376
AAFLKMKEK	9	Unmodified	_AAFLKMKEK_					0	0	0		nc|ENSG00000293412|O75343|GUCY1B2	nc|ENSG00000293412|O75343|GUCY1B2	nc|ENSG00000293412|O75343|GUCY1B2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1921264529228	2	533.309895	1064.60524	2.3751	0.0012667	-1.4657	-0.00078168	0.90943	0.00048501	533.3089858297765	47.294	0.25492	48.676	48.504	48.759	1.3825					17	7	3	0	0	0	0.11898	1	19735	19735		0	0	1	1175100			55	8026	32	32	72	72					0.07551850501954505
AAFLKMKEK	9	Unmodified	_AAFLKMKEK_					0	0	0		nc|ENSG00000293412|O75343|GUCY1B2	nc|ENSG00000293412|O75343|GUCY1B2	nc|ENSG00000293412|O75343|GUCY1B2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	533.309895	1064.60524	1.7403	0.00092814	-1.1971	-0.00063842	0.54326	0.00028973	533.3082763817173	46.313	0.28346	48.283	48.095	48.379	1.9703	-0.19652	0.00022464	NaN	0	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568620			56	8026	32	32							0.07551850501954505
AAFLREER	8	Unmodified	_AAFLREER_					0	0	0		ENST00000477801.1_1_1:153363297-153363519:-|nuORF	ENST00000477801.1_1_1:153363297-153363519:-|nuORF	ENST00000477801.1_1_1:153363297-153363519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2706786990166	2	496.269616	990.524678	0.26286	0.00013045	0.88804	0.0004407	1.1509	0.00057116	496.2698954003654	17.127	0.12049	18.429	18.352	18.472	1.3023					5	3	2	0	0	0	0.87276	1	7126	7126		13.508	2.3934	1	323860			57	6793	33	33	73	73					0.029037055032858916
AAFNALVTF	9	Unmodified	_AAFNALVTF_					0	0	0		ENST00000487214.1_1_1:889839-894659:-|nuORF;ENSG00000188976|ENST00000327044|NOC2L	ENST00000487214.1_1_1:889839-894659:-|nuORF	ENST00000487214.1_1_1:889839-894659:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	953.5125610232353	1	953.509094	952.501818	2.6733	0.002549	1.1047	0.0010534	3.778	0.0036023	953.5099040206974	74.166	0.5812	75.484	75.248	75.829	1.318					38	18	3	0	0	0	0.042029	2	31137	31089;31137		74.423	26.262	1	10638000			58	4887	34	34	74;75	75					0.023666863858124998
AAFNALVTF	9	Unmodified	_AAFNALVTF_					0	0	0		ENST00000487214.1_1_1:889839-894659:-|nuORF;ENSG00000188976|ENST00000327044|NOC2L	ENST00000487214.1_1_1:889839-894659:-|nuORF	ENST00000487214.1_1_1:889839-894659:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	953.5116454958916	1	953.509094	952.501818	3.0965	0.0029525	0.1154	0.00011003	3.2119	0.0030625	953.5090410749078	73.69	0.5547	75.487	75.224	75.778	1.7962					37	17	3	0	0	0	0.042029	3	30913	30864;30913;30957		74.423	30.564	1	9109000			59	4887	34	34	76;77;78	77					0.023666863858124998
AAFPGASLY	9	Unmodified	_AAFPGASLY_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	896.4517700076103	1	896.451245	895.443968	0.7923	0.00071026	-0.3722	-0.00033366	0.4201	0.0003766	896.4502535797293	52.393	0.75245	53.789	53.492	54.244	1.3966					57	23	4	0	0	0	0.020661	5	21975	21852;21898;21937;21975;22014		98.807	50.461	1	9784400			60	4644	35	35	79;80;81;82;83	82					-0.007935755396260902
AAFPGASLY	9	Unmodified	_AAFPGASLY_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.7302429080009	2	448.729261	895.443968	1.2496	0.00056074	1.2244	0.00054942	2.474	0.0011102	448.72996558223883	52.416	0.436	53.812	53.587	54.023	1.3966					25	13	2	0	0	0	0.13437	3	21967	21893;21967;22024		40.449	14.107	1	3063400			61	4644	35	35	84;85;86	85					-0.007935755396260902
AAFPGASLY	9	Unmodified	_AAFPGASLY_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	896.4532958865166	1	896.451245	895.443968	0.99986	0.00089633	-0.59195	-0.00053066	0.40791	0.00036567	896.4503658514205	51.868	0.74089	53.84	53.488	54.228	1.9722					57	23	3	0	0	0	0.028763	5	21689	21641;21689;21742;21792;21838		89.427	41.081	1	7699900			62	4644	35	35	87;88;89;90;91	88					-0.007935755396260902
AAFPGASLY	9	Unmodified	_AAFPGASLY_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.7297851443291	2	448.729261	895.443968	1.3102	0.00058793	0.19445	8.7254E-05	1.5047	0.00067519	448.72937569535316	51.874	0.52456	53.847	53.585	54.109	1.9722					29	16	2	0	0	0	0.052478	3	21730	21676;21730;21795		67.035	30.569	1	5248500			63	4644	35	35	92;93;94	93					-0.007935755396260902
AAFPGASLYL	10	Unmodified	_AAFPGASLYL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1009.535205066204	1	1009.53531	1008.52803	1.6312	0.0016468	0.26439	0.00026691	1.8956	0.0019137	1009.5349488955961	71.793	0.65603	73.135	72.905	73.562	1.3415					48	20	3	0	0	0	0.047918	4	30124	30075;30124;30177;30233		97.075	42.301	1	7354900			64	4644	36	36	95;96;97;98	96					0.02410955557274974
AAFPGASLYL	10	Unmodified	_AAFPGASLYL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2716552615166	2	505.271293	1008.52803	2.0024	0.0010118	-0.042916	-2.1684E-05	1.9595	0.00099007	505.27112318578617	71.705	0.7796	73.047	72.812	73.592	1.3415					61	24	3	0	0	0	0.081078	4	30139	30084;30139;30190;30242		67.344	38.262	1	9767400			65	4644	36	36	99;100;101;102	100					0.02410955557274974
AAFPGASLYL	10	Unmodified	_AAFPGASLYL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2722961306572	2	505.271293	1008.52803	1.5849	0.00080081	-0.27951	-0.00014123	1.3054	0.00065959	505.27098033282147	71.32	0.72131	73.144	72.88	73.601	1.824					59	22	3	0	0	0	0.052125	5	29966	29875;29919;29966;30007;30062		77.984	41.003	1	14301000			66	4644	36	36	103;104;105;106;107	105					0.02410955557274974
AAFPGASLYL	10	Unmodified	_AAFPGASLYL_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1009.536364734173	1	1009.53531	1008.52803	1.7465	0.0017631	-0.44208	-0.00044629	1.3044	0.0013168	1009.5346152735154	71.299	0.5975	73.123	72.91	73.507	1.824					45	18	3	0	0	0	0.06058	4	29928	29879;29928;29983;30036		74.423	34.473	1	6971300			67	4644	36	36	108;109;110;111	109					0.02410955557274974
AAFPGASLYLP	11	Unmodified	_AAFPGASLYLP_					0	0	0		nc|ENSG00000183283|Q15038-2|DAZAP2;ENSG00000183283|ENST00000412716|DAZAP2;nc|ENSG00000183283|Q15038-5|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	nc|ENSG00000183283|Q15038-2|DAZAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7980834841728	2	553.797675	1105.5808	2.6434	0.0014639	-1.3976	-0.00077401	1.2458	0.00068992	553.7969768598514	75.414	0.49242	77.196	76.913	77.406	1.7817					36	15	3	0	0	0	0.45252	1	31606	31606		25.399	1.3787	1	1312500			68	4644	37	37	112	112					0.03222913620084
AAFPIAVVA	9	Unmodified	_AAFPIAVVA_					0	0	0		nc|ENSG00000119392|Q53GS7-2|GLE1;ENSG00000119392|ENST00000309971|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.5110961794853	1	858.508366	857.501089	1.6839	0.0014456	1.5639	0.0013426	3.2478	0.0027882	858.5105434682442	67.39	0.37079	68.768	68.575	68.946	1.3778					24	11	3	0	0	0	0.051525	2	28259	28259;28310		67.413	30.947	1	1761500			69	2066	38	38	113;114	113					0.06663891736752703
AAFPIAVVA	9	Unmodified	_AAFPIAVVA_					0	0	0		nc|ENSG00000119392|Q53GS7-2|GLE1;ENSG00000119392|ENST00000309971|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.5123168826103	1	858.508366	857.501089	1.1935	0.0010247	1.6457	0.0014129	2.8393	0.0024375	858.5100169722765	66.918	0.30756	68.807	68.616	68.923	1.8889					19	9	3	0	0	0	0.051525	1	28059	28059		67.413	30.947	1	1966700			70	2066	38	38	115	115					0.06663891736752703
AAFPLAPLL	9	Unmodified	_AAFPLAPLL_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000134343|Q9BYT9-2|ANO3;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4;ENSG00000134343|ENST00000256737|ANO3	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7828246951103	2	456.781296	911.54804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.05	1	92.986	92.486	93.486	0.93623								0	0	0	0.036623	1	38769	38769		67.413	34.959	1				71	4734	39	39	116	116					0.08872751287890424
AAFPLAPLL	9	Unmodified	_AAFPLAPLL_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000134343|Q9BYT9-2|ANO3;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4;ENSG00000134343|ENST00000256737|ANO3	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5588256716728	1	912.555316	911.54804	3.1589	0.0028826	-0.65747	-0.00059998	2.5014	0.0022827	912.5519584822666	91.517	0.46597	92.843	92.588	93.054	1.3269					18	14	2	0	0	0	0.08022	2	38546	38498;38546		56.048	19.582	1	2356700			72	4734	39	39	117;118	118					0.08872751287890424
AAFPLAPLL	9	Unmodified	_AAFPLAPLL_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000134343|Q9BYT9-2|ANO3;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4;ENSG00000134343|ENST00000256737|ANO3	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7829162478447	2	456.781296	911.54804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.483	1	92.813	92.313	93.313	1.3295								0	0	0	0.043116	1	38525	38525		45.75	11.563	1				73	4734	39	39	119	119					0.08872751287890424
AAFPLAPLL	9	Unmodified	_AAFPLAPLL_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;nc|ENSG00000151572|Q32M45-3|ANO4;nc|ENSG00000134343|Q9BYT9-2|ANO3;nc|ENSG00000151572|Q32M45-2|ANO4;ENSG00000151572|ENST00000392977|ANO4;ENSG00000134343|ENST00000256737|ANO3	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7827941775322	2	456.781296	911.54804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.625	1	92.952	92.452	93.452	1.3269								0	0	0	0.036623	1	38582	38582		67.413	34.959	1				74	4734	39	39	120	120					0.08872751287890424
AAFPLPVVV	9	Unmodified	_AAFPLPVVV_					0	0	0		RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant;RNF167|p.E286Gfs*16|1|0.04|ENSG00000108523|chr17:4944819-4944820|-/GTGACATGATAAAACAGAA|frameshift_variant;RNF167|p.T316Lfs*9|1|0.11|ENSG00000108523|chr17:4944909-4944909|A/-|frameshift_variant;ENSG00000108523|ENST00000262482|RNF167	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	912.5560180544853	1	912.555316	911.54804	1.5647	0.0014279	-0.32622	-0.00029769	1.2385	0.0011302	912.553513559806	84.48	0.31773	85.639	85.464	85.782	1.159					16	9	2	0	0	0	0.051525	1	35454	35454		67.413	30.947	1	2032100			75	1637	40	40	121	121					0.08872751287901792
AAFPLPVVV	9	Unmodified	_AAFPLPVVV_					0	0	0		RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant;RNF167|p.E286Gfs*16|1|0.04|ENSG00000108523|chr17:4944819-4944820|-/GTGACATGATAAAACAGAA|frameshift_variant;RNF167|p.T316Lfs*9|1|0.11|ENSG00000108523|chr17:4944909-4944909|A/-|frameshift_variant;ENSG00000108523|ENST00000262482|RNF167	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5554077029228	1	912.555316	911.54804	1.8836	0.0017189	-2.0517	-0.0018723	-0.16813	-0.00015343	912.5520802685531	84	0.39546	85.638	85.444	85.84	1.6379					15	12	2	0	0	0	0.11074	1	35235	35235		45.75	17.577	1	1855900			76	1637	40	40	122	122					0.08872751287901792
AAFPYPMMH	9	Unmodified	_AAFPYPMMH_					0	0	0		ENSG00000181904|ENST00000394976|C5orf24	ENSG00000181904|ENST00000394976|C5orf24	ENSG00000181904|ENST00000394976|C5orf24	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1916992068291	2	532.738248	1063.46194	1.5631	0.00083271	-1.0632	-0.00056643	0.49983	0.00026628	532.7390005099747	45.885	0.27984	47.855	47.663	47.943	1.9703					11	8	2	0	0	0	0.116	1	19256	19256		2.3027	1.7012	1	476270			77	4590	41	41	123	123					-0.06724899880759949
AAFRIVVM	8	Oxidation (M)	_AAFRIVVM(Oxidation (M))_		AAFRIVVM(1)		AAFRIVVM(71)	0	0	1		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.7625305056572	2	461.762581	921.510608	0.4016	0.00018544	-0.69432	-0.00032061	-0.29273	-0.00013517	461.7623632359809	36.911	0.27712	38.187	38	38.277	1.2762					29	16	3	0	0	0	0.31225	1	15473	15473		70.716	51.277	1	4815300			78	750	42	42	124	124		9			0.04671336750629962
AAFRIVVM	8	Oxidation (M)	_AAFRIVVM(Oxidation (M))_		AAFRIVVM(1)		AAFRIVVM(94)	0	0	1		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.7618591189384	2	461.762581	921.510608	0.64947	0.0002999	-0.25602	-0.00011822	0.39344	0.00018168	461.7625400576517	37.182	0.2957	38.466	38.296	38.591	1.284					41	25	2	0	0	0	0.085255	2	15615	15572;15615		93.883	67.542	1	6894100			79	750	42	42	125;126	126		9			0.04671336750629962
AAFRIVVM	8	Oxidation (M)	_AAFRIVVM(Oxidation (M))_		AAFRIVVM(1)		AAFRIVVM(51)	0	0	1		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.7621032595634	2	461.762581	921.510608	1.0451	0.00048256	-0.36972	-0.00017072	0.67533	0.00031184	461.76221693695055	36.307	0.25869	38.124	37.952	38.211	1.8176					30	18	2	0	0	0	0.45419	1	15192	15192		50.855	36.273	1	5254400			80	750	42	42	127	127		9			0.04671336750629962
AAFRIVVM	8	Oxidation (M)	_AAFRIVVM(Oxidation (M))_		AAFRIVVM(1)		AAFRIVVM(71)	0	0	1		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	461.7624694705009	2	461.762581	921.510608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.591	1	38.408	37.908	38.908	1.8176								0	0	0	0.15484	1	15352	15352		70.716	44.374	1				81	750	42	42	128	128		9			0.04671336750629962
AAFRIVVM	8	Unmodified	_AAFRIVVM_					0	0	0		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7645141482353	2	453.765123	905.515694	1.1641	0.00052824	-1.3319	-0.00060436	-0.16775	-7.6119E-05	453.76471016792016	51.856	0.95169	53.252	53.04	53.992	1.3966					81	31	4	0	0	0	0.18696	7	21658	21658;21701;21747;21794;21849;21903;21954		81.864	55.523	1	60836000			82	750	42	43	129;130;131;132;133;134;135	129					0.059156406132501616
AAFRIVVM	8	Unmodified	_AAFRIVVM_					0	0	0		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7652160525322	2	453.765123	905.515694	0.32497	0.00014746	-1.021	-0.0004633	-0.69603	-0.00031583	453.7648632458055	51.252	1.0742	53.227	53.007	54.081	1.9753					97	37	4	0	0	0	0.085255	8	21532	21409;21447;21486;21532;21574;21625;21680;21733		93.883	67.542	1	48078000			83	750	42	43	136;137;138;139;140;141;142;143	139					0.059156406132501616
AAFRKKKK	8	Unmodified	_AAFRKKKK_					0	0	0		ENST00000601728.1_1_19:23309373-23309649:-|nuORF;nc|ENSG00000164465|Q8N8Z6-2|DCBLD1;ENSG00000164465|ENST00000338728|DCBLD1	ENST00000601728.1_1_19:23309373-23309649:-|nuORF	ENST00000601728.1_1_19:23309373-23309649:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	326.2177612185478	3	326.218666	975.634169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.164	1	32.458	31.958	32.958	0.29431								0	0	0	1.0178	1	13499	13499		0.45834	0.45834	1				84	3778	43	44	144	144					0.14537755913272576
AAFRKKKK	8	Unmodified	_AAFRKKKK_					0	0	0		ENST00000601728.1_1_19:23309373-23309649:-|nuORF;nc|ENSG00000164465|Q8N8Z6-2|DCBLD1;ENSG00000164465|ENST00000338728|DCBLD1	ENST00000601728.1_1_19:23309373-23309649:-|nuORF	ENST00000601728.1_1_19:23309373-23309649:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	326.2177307009697	3	326.218666	975.634169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.252	1	32.546	32.046	33.046	0.29431								0	0	0	1.0178	1	13536	13536		0.45834	0.45834	1				85	3778	43	44	145	145					0.14537755913272576
AAGKAHAL	8	Unmodified	_AAGKAHAL_					0	0	0		ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	738.4304077029228	1	738.425699	737.418422	2.487	0.0018365	-2.381	-0.0017582	0.10601	7.828E-05	738.4252139041245	105.42	0.098427	105.58	105.51	105.61	0.15859					5	4	2	0	0	0	2.3239	1	44855	44855		0.79363	0	1	7080700			86	7352	44	45	146	146					0.03920994728593996
AAGKAHAL	8	Unmodified	_AAGKAHAL_					0	0	0		ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	738.425699	737.418422	1.3719	0.001013	3.7701	0.002784	5.142	0.003797	738.4288664892592	105.4	0.056183	105.4	105.37	105.42	0	-0.066796	0.0022029	NaN	0.79363	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2781300			87	7352	44	45							0.03920994728593996
AAGKAHAL	8	Unmodified	_AAGKAHAL_					0	0	0		ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	ENST00000564834.1_1_7:152161668-152162124:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	738.425699	737.418422	2.7185	0.0020074	0.71432	0.00052747	3.4328	0.0025349	738.4267264671497	105.36	0.056854	105.42	105.38	105.43	0.056801	-0.048607	-5.3637E-05	NaN	0.79363	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2073300			88	7352	44	45							0.03920994728593996
AAHNHLSHF	9	Unmodified	_AAHNHLSHF_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|28|1|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|28|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.2974731326103	2	517.251757	1032.48896	0.96729	0.00050033	1.1992	0.0006203	2.1665	0.0011206	517.2532997108614	30.715	0.56466	31.997	31.811	32.376	1.2825					28	17	3	0	0	0	0.11645	1	13019	13019		2.0598	0	1	1036000	+		89	14191	45	46	147	147					-0.025983319537317584
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7848083376884	2	491.784036	981.553519	2.6837	0.0013198	-0.06028	-2.9645E-05	2.6234	0.0012901	491.78392774510365	75.357	0.82928	76.663	76.311	77.141	1.3063					52	26	5	0	0	0	0.11074	3	31619	31573;31619;31669		45.75	9.2838	1	13229000			90	4558	46	47	148;149;150	149					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7851745486259	2	491.784036	981.553519	2.4904	0.0012247	0.19919	9.7961E-05	2.6896	0.0013227	491.7840348643684	75.66	0.82059	76.966	76.799	77.62	1.3063					66	26	3	0	0	0	0.11074	4	31710	31710;31762;31809;31861		45.75	9.2838	1	8748200			91	4558	46	47	151;152;153;154	151					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5640136599541	1	982.560795	981.553519	3.2927	0.0032353	-0.58403	-0.00057384	2.7087	0.0026614	982.5600930018919	75.445	4.7328	76.752	76.247	80.98	1.3063					380	152	4	0	0	0	0.11074	2	31759	31759;32347		45.75	9.2838	1	50304000			92	4558	46	47	155;156	155					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7848083376884	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.198	1	77.492	76.992	77.992	1.2938								0	0	0	0.089993	1	31987	31987		36.466	21.884	1				93	4558	46	47	157	157					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7849304080009	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.325	1	77.618	77.118	78.118	1.2938								0	0	0	0.043116	1	32042	32042		45.75	9.2838	1				94	4558	46	47	158	158					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7840759158134	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.724	1	78.018	77.518	78.518	1.2938								0	0	0	0.089993	1	32208	32208		36.466	13.318	1				95	4558	46	47	159	159					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7835265994072	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.969	1	78.256	77.756	78.756	1.2869								0	0	0	0.089993	1	32311	32311		36.466	15.595	1				96	4558	46	47	160	160					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7845336794853	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.516	1	78.797	78.297	79.297	1.2809								0	0	0	0.27219	1	32534	32534		20.871	7.3633	1				97	4558	46	47	161	161					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7848998904228	2	491.784036	981.553519	2.8887	0.0014206	-0.10935	-5.3775E-05	2.7794	0.0013669	491.78383907095355	75.078	0.8756	76.859	76.228	77.103	1.7817					73	27	4	0	0	0	0.11074	3	31460	31460;31502;31558		45.75	9.2838	1	9459000			98	4558	46	47	162;163;164	162					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7851135134697	2	491.784036	981.553519	2.8675	0.0014102	-1.5782	-0.00077616	1.2893	0.00063406	491.7833512829949	75.491	0.56923	77.273	77.103	77.672	1.7817					48	18	3	0	0	0	0.11074	4	31663	31663;31711;31766;31819		45.75	17.577	1	4289400			99	4558	46	47	165;166;167;168	165					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7843810915947	2	491.784036	981.553519	2.883	0.0014178	-2.2586	-0.0011108	0.62441	0.00030707	491.78258144612266	76.179	0.72863	77.946	77.658	78.386	1.7672					48	22	3	0	0	0	0.24585	2	31872	31872;31947		28.173	7.302	1	2864300			100	4558	46	47	169;170	169					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5616943240166	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.16975	3	32152	32152;32205;33197		36.466	8.2929	1	44767000			101	4558	46	47	171;172;173	171					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7850524783134	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.769	1	76.551	76.051	77.051	1.7817								0	0	0	0.043116	1	31363	31363		45.75	21.076	1				102	4558	46	47	174	174					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7851745486259	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.88	1	76.661	76.161	77.161	1.7817								0	0	0	0.043116	1	31409	31409		45.75	9.2838	1				103	4558	46	47	175	175					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7833740115166	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.424	1	78.191	77.691	78.691	1.7672								0	0	0	0.043116	1	32062	32062		45.75	9.2838	1				104	4558	46	47	176	176					0.062004300797070755
AAIGLVIYY	9	Unmodified	_AAIGLVIYY_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000447375.1_1_X:153063080-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7846862673759	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.078	1	78.83	78.33	79.33	1.7514								0	0	0	0.27219	1	32326	32326		20.871	6.2895	1				105	4558	46	47	177	177					0.062004300797070755
AAINFQPKM	9	Unmodified	_AAINFQPKM_					0	0	0		ENST00000562219.1_1_15:73023651-73027536:+|nuORF;nc|ENSG00000140463|Q96RK4-3|BBS4;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2715942263603	2	510.27077	1018.52699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.063	1	37.339	36.839	37.839	1.2762								0	0	0	0.061573	1	15140	15140		42.095	26.247	1				106	2919	47	48	178	178					0.018464179167267503
AAISEVLYV	9	Unmodified	_AAISEVLYV_					0	0	0		nc|ENSG00000174720|Q4G0J3-2|LARP7;ENSG00000174720|ENST00000344442|LARP7;nc|ENSG00000174720|Q4G0J3-3|LARP7	nc|ENSG00000174720|Q4G0J3-2|LARP7	nc|ENSG00000174720|Q4G0J3-2|LARP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.7719604372978	2	482.771126	963.527698	2.8073	0.0013553	-2.3109	-0.0011157	0.49636	0.00023963	482.7701345702564	63.284	0.37399	64.698	64.502	64.876	1.4134					19	11	2	0	0	0	0.10722	1	26529	26529		46.921	10.877	1	1387400			107	4339	48	49	179	179					0.04447535837425676
AAISEVLYV	9	Unmodified	_AAISEVLYV_					0	0	0		nc|ENSG00000174720|Q4G0J3-2|LARP7;ENSG00000174720|ENST00000344442|LARP7;nc|ENSG00000174720|Q4G0J3-3|LARP7	nc|ENSG00000174720|Q4G0J3-2|LARP7	nc|ENSG00000174720|Q4G0J3-2|LARP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7717773318291	2	482.771126	963.527698	2.4112	0.0011641	-1.8228	-0.00087999	0.5884	0.00028406	482.7704626793407	62.718	0.28038	64.663	64.564	64.845	1.9444					13	8	2	0	0	0	0.13437	1	26328	26328		40.449	17.3	1	957200			108	4339	48	49	180	180					0.04447535837425676
AAKAPKLLRQN	11	Unmodified	_AAKAPKLLRQN_					0	0	0			REV__CYP27A1|p.E170K|1|0.14|ENSG00000135929|chr2:218812283-218812283|G/A|missense_variant	REV__CYP27A1|p.E170K|1|0.14|ENSG00000135929|chr2:218812283-218812283|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1896545290947	4	303.191111	1208.73534	-2.8466	-0.00086306	-1.7797	-0.00053958	-4.6263	-0.0014026	303.18991587015404	27.589	0.51586	27.589	27.259	27.775	0					53	16	4	0	0	0	1.0365	1	11554	11554		1.2148	0	1	4023300	+		109	8417	49	50	181	181					0.13932162825312844
AAKAPKLLRQN	11	Unmodified	_AAKAPKLLRQN_					0	0	0			REV__CYP27A1|p.E170K|1|0.14|ENSG00000135929|chr2:218812283-218812283|G/A|missense_variant	REV__CYP27A1|p.E170K|1|0.14|ENSG00000135929|chr2:218812283-218812283|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	303.191111	1208.73534	-2.8466	-0.00086306	-1.7797	-0.00053958	-4.6263	-0.0014026	303.18991587015404	27.589	0.51586	27.589	27.259	27.775	0	0	0	NaN	1.2148	53	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4023300	+		110	8417	49	50							0.13932162825312844
AAKEKFPV	8	Unmodified	_AAKEKFPV_					0	0	0			REV__ENST00000327470.4_1_11:22645918-22646086:-|nuORF	REV__ENST00000327470.4_1_11:22645918-22646086:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1205016970634	2	445.260728	888.506903	2.3383	0.0010412	-0.60902	-0.00027117	1.7293	0.00077	445.2603363860825	69.425	0.41222	71.278	71.103	71.515	1.853					21	12	2	0	0	0	2.3239	1	29085	29085		0.79363	0	1	1549800	+		111	12435	50	51	182	182					0.05818990248417322
AALARRPVGRG	11	Unmodified	_AALARRPVGRG_					0	0	0			REV__ENST00000454486.4_1_15:32828592-32828919:-|nuORF	REV__ENST00000454486.4_1_15:32828592-32828919:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3448364138603	2	562.343981	1122.67341	1.8758	0.0010548	-0.053188	-2.991E-05	1.8226	0.0010249	562.3436917925029	72.52	2.0309	72.845	71.85	73.881	0.32494					136	64	3	0	0	0	1.0362	1	30515	30515		1.3295	0.72803	1	7864900	+		112	13156	51	52	183	183					0.11697856196815337
AALFFFLKI	9	Unmodified	_AALFFFLKI_					0	0	0		L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|78|2|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|78|2|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|78|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1622802615166	2	535.325871	1068.63719	1.9963	0.0010687	1.2521	0.00067027	3.2484	0.0017389	535.3263969308886	70.388	0.15582	72.226	72.104	72.26	1.8378					6	4	2	0	0	0	0.11787	1	29529	29529		0.6015	0	1	136110			113	7697	52	53	184	184					0.10561586247422383
AALKIKIAT	9	Unmodified	_AALKIKIAT_					0	0	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	928.6205322146416	1	928.618979	927.611703	1.1433	0.0010616	1.7803	0.0016532	2.9235	0.0027148	928.6201815938965	106.2	0.15152	106.2	106.11	106.26	0					21	7	4	0	0	0	0.85019	1	45251	45251		0.52476	0	1	88816000			114	4317	53	54	185	185					0.1450011172498762
AALKIKIAT	9	Unmodified	_AALKIKIAT_					0	0	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	928.618979	927.611703	2.8005	0.0026006	-0.14289	-0.00013269	2.6576	0.0024679	928.6182760737668	106.15	0.16299	106.21	106.12	106.29	0.05455	-0.03219	0.0002812	NaN	0.52476	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69554000			115	4317	53	54							0.1450011172498762
AALKIKIAT	9	Unmodified	_AALKIKIAT_					0	0	0		ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	ENSG00000174145|ENST00000309447|NWD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	928.618979	927.611703	3.3358	0.0030977	-0.91315	-0.00084797	2.4227	0.0022498	928.6177934793749	106.13	0.17796	106.29	106.19	106.37	0.15781	0.049149	-0.00043407	NaN	0.52476	32	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712420000			116	4317	53	54							0.1450011172498762
AALTFPVLF	9	Unmodified	_AALTFPVLF_					0	0	0		ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2;ENST00000561189.1_1_15:44789252-44795711:+|nuORF	ENSG00000137770|ENST00000260327|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7910339236259	2	489.786579	977.558604	3.8912	0.0019058	2.9045	0.0014226	6.7957	0.0033284	489.78818043318864	96.623	0.14825	96.908	96.806	96.954	0.28442					7	4	2	0	0	0	0.020661	1	40637	40637		98.807	41.336	1	3240400			117	2787	54	55	186	186					0.06892733942311224
AALTFPVLF	9	Unmodified	_AALTFPVLF_					0	0	0		ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2;ENST00000561189.1_1_15:44789252-44795711:+|nuORF	ENSG00000137770|ENST00000260327|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7889587283134	2	489.786579	977.558604	3.3328	0.0016324	1.732	0.00084829	5.0648	0.0024807	489.78719204654254	96.435	0.15511	96.741	96.664	96.819	0.3062					9	4	3	0	0	0	0.020661	1	40571	40571		98.807	41.336	1	4879500			118	2787	54	55	187	187					0.06892733942311224
AALYDFPF	8	Unmodified	_AALYDFPF_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__nc|ENSG00000115155|Q9HC10-2|OTOF	REV__nc|ENSG00000115155|Q9HC10-4|OTOF	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2329589724541	2	472.231636	942.448719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.36	1	100.54	100.04	101.04	0.18047								0	0	0	1.0178	1	42231	42231		0.79363	0	1		+		119	9427;14413	55	56	188	188					-0.024806913968632216
AAMPRPVSY	9	Unmodified	_AAMPRPVSY_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2548400759697	2	496.25512	990.495686	1.3494	0.00066965	-0.93223	-0.00046262	0.41717	0.00020702	496.2545444273427	24.033	0.21786	25.275	25.175	25.392	1.241					11	6	2	0	0	0	0.52273	1	10061	10061		14.838	6.245	1	278880			120	1881	56	57	189	189					5.844882628025516E-05
AAMPRPVSY	9	Unmodified	_AAMPRPVSY_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2579833865166	2	496.25512	990.495686	0.5261	0.00026108	-0.17192	-8.5317E-05	0.35418	0.00017577	496.2552815197	23.622	0.20356	25.273	25.177	25.38	1.6511					11	6	2	0	0	0	0.52273	1	9869	9869		14.838	6.245	1	278060			121	1881	56	57	190	190					5.844882628025516E-05
AANTYAPNPI	10	Unmodified	_AANTYAPNPI_					0	0	0			REV__tr|A0A553SRB0|A0A553SRB0_NIACIEndo-beta-N-acetylglucosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00765PE=4SV=1	REV__tr|A0A553SRB0|A0A553SRB0_NIACIEndo-beta-N-acetylglucosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00765PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2630493044853	2	516.261456	1030.50836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.792	1	73.134	72.634	73.634	1.3415								0	0	0	0.30792	1	30131	30131		32.786	1.5173	1		+		122	15152	57	58	191	191					-0.005674204534898308
AAPETHND	8	Unmodified	_AAPETHND_					0	0	0			REV__ENSG00000163501|ENST00000295731|IHH	REV__ENSG00000163501|ENST00000295731|IHH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3674804568291	1	854.363886	853.35661	3.0911	0.0026409	-2.7891	-0.0023829	0.30201	0.00025803	854.361747717658	100.5	0.20885	100.7	100.6	100.81	0.20527					8	6	2	0	0	0	0.88504	1	42248	42248		5.7604	1.4312	1	6962300	+		123	10687	58	59	192	192					-0.07593401481187811
AAPETHND	8	Unmodified	_AAPETHND_					0	0	0			REV__ENSG00000163501|ENST00000295731|IHH	REV__ENSG00000163501|ENST00000295731|IHH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	854.363886	853.35661	2.7866	0.0023808	-4.5781	-0.0039113	-1.7914	-0.0015305	854.3598079266612	100.69	0.18551	100.77	100.66	100.85	0.072716	0.020958	-0.00070955	NaN	5.7604	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7298000	+		124	10687	58	59							-0.07593401481187811
AAPETHND	8	Unmodified	_AAPETHND_					0	0	0			REV__ENSG00000163501|ENST00000295731|IHH	REV__ENSG00000163501|ENST00000295731|IHH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	854.363886	853.35661	3.0911	0.0026409	-2.7891	-0.0023829	0.30201	0.00025803	854.361747717658	100.5	0.20885	100.7	100.6	100.81	0.20527	-0.04301	0.00081889	NaN	5.7604	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6962300	+		125	10687	58	59							-0.07593401481187811
AAPHTCAGPL	10	Unmodified	_AAPHTCAGPL_					0	0	0			REV__ENST00000391694.4_1_19:58989172-58992090:+|nuORF	REV__ENST00000391694.4_1_19:58989172-58992090:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2315856814384	2	469.231645	936.448736	1.8372	0.00086208	0.23938	0.00011232	2.0766	0.0009744	469.2316886982113	66.639	0.3623	68.528	68.341	68.704	1.8889					27	11	3	0	0	0	0.84024	1	27983	27983		7.9102	0.62092	1	2251400	+		126	12792	59	60	193	193					-0.022030146684983265
AAPHTCAGPL	10	Unmodified	_AAPHTCAGPL_					0	0	0			REV__ENST00000391694.4_1_19:58989172-58992090:+|nuORF	REV__ENST00000391694.4_1_19:58989172-58992090:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	469.231645	936.448736	1.8372	0.00086208	0.23938	0.00011232	2.0766	0.0009744	469.2316886982113	66.639	0.3623	68.528	68.341	68.704	1.8889	-0.0065696	-8.2964E-05	NaN	7.9102	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2251400	+		127	12792	59	60							-0.022030146684983265
AAPLLTGLL	9	Unmodified	_AAPLLTGLL_					0	0	0			REV__nc|ENSG00000166923|O60565-2|GREM1	REV__nc|ENSG00000166923|O60565-2|GREM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7799865603447	2	434.778754	867.542954	0.40802	0.0001774	3.2358	0.0014069	3.6438	0.0015843	434.78004121388676	18.027	0.55276	19.475	19.265	19.817	1.448					35	18	4	0	0	0	0.76456	1	7588	7588		4.756	0	1	7330200	+		128	10848	60	61	194	194					0.10388447425293634
AAPLLTGLL	9	Unmodified	_AAPLLTGLL_					0	0	0			REV__nc|ENSG00000166923|O60565-2|GREM1	REV__nc|ENSG00000166923|O60565-2|GREM1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	434.778754	867.542954	0.25285	0.00010993	3.3624	0.0014619	3.6153	0.0015718	434.7800994849191	19.222	0.61961	19.222	19.045	19.665	0	-0.20281	0.00018791	NaN	4.756	53	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12683000	+		129	10848	60	61							0.10388447425293634
AAPLLTGLL	9	Unmodified	_AAPLLTGLL_					0	0	0			REV__nc|ENSG00000166923|O60565-2|GREM1	REV__nc|ENSG00000166923|O60565-2|GREM1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	434.778754	867.542954	0.40802	0.0001774	3.2358	0.0014069	3.6438	0.0015843	434.78004121388676	18.027	0.55276	19.475	19.265	19.817	1.448	0.050423	7.7808E-05	NaN	4.756	35	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7330200	+		130	10848	60	61							0.10388447425293634
AAPMESLLEL	10	Unmodified	_AAPMESLLEL_					0	0	0			REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2830078005791	2	537.281	1072.54745	3.0748	0.001652	2.7791	0.0014932	5.8539	0.0031452	537.280939077338	74.976	0.43427	76.282	76.09	76.524	1.3063					28	13	3	0	0	0	0.44465	1	31533	31533		30.637	2.1497	1	2010300	+		131	14949	61	62	195	195					0.01407543785899179
AAPMESLLEL	10	Unmodified	_AAPMESLLEL_					0	0	0			REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	537.281	1072.54745	3.0748	0.001652	2.7791	0.0014932	5.8539	0.0031452	537.280939077338	74.976	0.43427	76.282	76.09	76.524	1.3063	-0.057685	-0.0006248	NaN	30.637	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2010300	+		132	14949	61	62							0.01407543785899179
AAPMESLLEL	10	Unmodified	_AAPMESLLEL_					0	0	0			REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	REV__tr|A0A553SKD1|A0A553SKD1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_18640PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.281	1072.54745	3.0252	0.0016254	4.0137	0.0021565	7.0388	0.0037818	537.2807031276985	74.616	0.47553	76.398	76.099	76.575	1.7817	0.057685	0.00070181	NaN	30.637	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1255000	+		133	14949	61	62							0.01407543785899179
AAPTVRLAAPL	11	Unmodified	_AAPTVRLAAPL_					0	0	0			REV__ENST00000380421.3_1_X:15511311-15511419:-|nuORF	REV__ENST00000380421.3_1_X:15511311-15511419:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3320800662041	2	540.332216	1078.64988	2.1501	0.0011618	-2.4789	-0.0013394	-0.32879	-0.00017765	540.3308373957354	69.207	1.3996	70.572	69.447	70.847	1.3657					105	45	3	0	0	0	0.96769	1	28741	28741		5.7319	5.7319	1	3296600	+		134	12758	62	63	196	196					0.11369997639667417
AAQAACAKMR	10	Unmodified	_AAQAACAKMR_					0	0	0		nc|ENSG00000259956|Q8NDT2-2|RBM15B;ENSG00000259956|ENST00000563281|RBM15B	nc|ENSG00000259956|Q8NDT2-2|RBM15B	nc|ENSG00000259956|Q8NDT2-2|RBM15B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.8415405154228	3	340.840761	1019.50045	1.287	0.00043867	0.40522	0.00013811	1.6922	0.00057678	340.84081032166637	75.549	1.715	76.856	76.311	78.026	1.3063					84	55	2	0	0	0	0.85604	1	31637	31637		5.7834	2.1964	1	1893800			135	5416	63	64	197	197					-0.008515942462508974
AAQAACAKMR	10	Unmodified	_AAQAACAKMR_					0	0	0		nc|ENSG00000259956|Q8NDT2-2|RBM15B;ENSG00000259956|ENST00000563281|RBM15B	nc|ENSG00000259956|Q8NDT2-2|RBM15B	nc|ENSG00000259956|Q8NDT2-2|RBM15B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	340.8411437869072	3	340.840761	1019.50045	2.2712	0.00077412	-0.73773	-0.00025145	1.5335	0.00052267	340.8403104583145	75.094	0.71452	76.875	76.389	77.103	1.7817					56	22	3	0	0	0	0.85604	1	31416	31416		5.7834	2.1964	1	1703400			136	5416	63	64	198	198					-0.008515942462508974
AAQEEYVK	8	Unmodified	_AAQEEYVK_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2359802126884	2	469.234907	936.455261	0.40946	0.00019213	1.0069	0.00047246	1.4163	0.00066459	469.23529941219823	11.549	0.19028	12.31	12.193	12.384	0.76165					11	5	3	0	0	0	0.64178	1	4817	4817		36.127	9.7857	1	649630			137	3255	64	65	199	199					-0.015507982361327777
AAQEEYVK	8	Unmodified	_AAQEEYVK_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	469.234907	936.455261	-0.12279	-5.7619E-05	1.1158	0.00052357	0.993	0.00046595	469.23514156772967	11.673	0.22137	12.367	12.226	12.448	0.69395	0.02835	5.4361E-05	NaN	36.127	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	471300			138	3255	64	65							-0.015507982361327777
AAQLAAPLR	9	Unmodified	_AAQLAAPLR_					0	0	0			REV__ENSG00000164379|ENST00000296839|FOXQ1	REV__ENSG00000164379|ENST00000296839|FOXQ1	MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7809631228447	2	455.777077	909.5396	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.506	1	38.506	38.006	39.006	0								0	0	0	0.41514	1	16142	16142		7.2892	1.0834	1		+		139	10735	65	66	200	200					0.08121197371258404
AAREEETME	9	Unmodified	_AAREEETME_					0	0	0			REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0692626833916	3	355.822089	1064.44444	0.45872	0.00016322	3.0542	0.0010868	3.5129	0.00125	355.82327493804485	71.813	0.37477	73.155	72.967	73.342	1.3415					15	11	2	0	0	0	0.11898	1	30142	30142		0.26902	0.1097	1	447410	+		140	12929	66	67	201	201					-0.08520568672724949
AARKENYIYY	10	Unmodified	_AARKENYIYY_					0	0	0		tr|A0A7D6VYH3|A0A7D6VYH3_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15925PE=3SV=1	tr|A0A7D6VYH3|A0A7D6VYH3_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15925PE=3SV=1	tr|A0A7D6VYH3|A0A7D6VYH3_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15925PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.178	1	14.006	13.506	14.506	0.82789								0	0	0	0.66218	1	5463	5463		0.77653	0.32202	1				141	17000	67	68	202	202					0.007201845634881465
AARKRAKK	8	Unmodified	_AARKRAKK_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.6212646365166	1	928.616294	927.609017	3.4021	0.0031592	1.2368	0.0011485	4.6389	0.0043077	928.617116777194	106.1	0.177	106.26	106.17	106.34	0.16174					34	9	5	0	0	0	0.89178	1	45354	45354		0.69038	0.16561	1	532650000			142	884	68	69	203	203					0.1423170111069112
AARKRAKK	8	Unmodified	_AARKRAKK_					0	0	0		ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	ENSG00000072501|ENST00000322213|SMC1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.6193115115166	1	928.616294	927.609017	3.3996	0.0031569	0.19262	0.00017887	3.5922	0.0033358	928.6162189627867	107.68	0.50795	107.84	107.43	107.94	0.15795					58	26	5	0	0	0	0.89178	1	46357	46357		0.69038	0.16561	1	3700899999.9999995			143	884	68	69	204	204					0.1423170111069112
AARKVKKLF	9	Unmodified	_AARKVKKLF_					0	0	0			REV__tr|A0A553SGJ7|A0A553SGJ7_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_10970PE=4SV=1	REV__tr|A0A553SGJ7|A0A553SGJ7_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_10970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1060.700244128704	1	1060.69896	1059.69168	1.2873	0.0013654	-0.34411	-0.000365	0.94317	0.0010004	1060.6982378942002	107.61	0.19257	107.61	107.51	107.7	0					26	9	4	0	0	0	0.85019	1	46149	46149		0.52476	0.52476	1	99786000	+		144	14752	69	70	205	205					0.16422598118833776
AARKVKKLF	9	Unmodified	_AARKVKKLF_					0	0	0			REV__tr|A0A553SGJ7|A0A553SGJ7_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_10970PE=4SV=1	REV__tr|A0A553SGJ7|A0A553SGJ7_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_10970PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1060.69896	1059.69168	1.2873	0.0013654	-0.34411	-0.000365	0.94317	0.0010004	1060.6982378942002	107.61	0.19257	107.61	107.51	107.7	0	-0.0082038	0.00090021	NaN	0.52476	26	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99786000	+		145	14752	69	70							0.16422598118833776
AARLPRLLVL	10	Unmodified	_AARLPRLLVL_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3795654177666	2	561.3795	1120.74445	0.77935	0.00043751	0.52377	0.00029404	1.3031	0.00073155	561.3797907322461	107.57	0.19677	107.57	107.45	107.65	0					32	9	4	0	0	0	0.89803	1	46171	46171		0.40072	0.40072	1	321550000			146	3851	70	71	206	206					0.1889055618164548
AARLPRLLVL	10	Unmodified	_AARLPRLLVL_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3792602419853	2	561.3795	1120.74445	3.2014	0.0017972	-2.6793	-0.0015041	0.52209	0.00029309	561.3780000728343	107.51	0.22853	107.67	107.54	107.77	0.15781					43	11	5	0	0	0	0.89803	1	46290	46290		0.40072	0.40072	1	1871999999.9999998			147	3851	70	71	207	207					0.1889055618164548
AARLRAVDF	9	Unmodified	_AARLRAVDF_					0	0	0		ENST00000528296.5_1_8:146015816-146017457:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENSG00000161016|ENST00000528957|RPL8	ENST00000528296.5_1_8:146015816-146017457:-|nuORF	ENST00000528296.5_1_8:146015816-146017457:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.1977416872978	3	340.197931	1017.57196	0.018307	6.228E-06	-0.18371	-6.2496E-05	-0.1654	-5.6268E-05	340.1977940924567	23.397	0.24495	24.612	24.473	24.718	1.2145					12	7	2	0	0	0	0.80869	1	9778	9778		2.9952	1.5133	1	497220			148	3587	71	72	208	208					0.06387984774266897
AARLRAVDF	9	Unmodified	_AARLRAVDF_					0	0	0		ENST00000528296.5_1_8:146015816-146017457:-|nuORF;ENST00000531767.1_1_8:146017155-146017514:-|nuORF;ENST00000525232.5_1_8:146017155-146017514:-|nuORF;ENSG00000161016|ENST00000528957|RPL8	ENST00000528296.5_1_8:146015816-146017457:-|nuORF	ENST00000528296.5_1_8:146015816-146017457:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	340.197931	1017.57196	0.03395	1.155E-05	-1.2255	-0.00041691	-1.1915	-0.00040536	340.1973882118605	22.988	0.27953	24.639	24.498	24.777	1.6511	0.01369	-0.00074102	NaN	2.9952	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	423900			149	3587	71	72							0.06387984774266897
AARLRLLRV	9	Unmodified	_AARLRLLRV_					0	0	0			REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.9155761599541	3	356.576854	1066.70873	-1.7344	-0.00061844	-3.823	-0.0013632	-5.5574	-0.0019816	356.5748791372065	24.819	0.33635	24.819	24.552	24.888	0					14	10	2	0	0	0	0.11901	1	10279	10279		2.7352	1.6637	1	509380	+		150	11424	72	73	209	209					0.17804518724642548
AARLRLLRV	9	Unmodified	_AARLRLLRV_					0	0	0			REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	356.576854	1066.70873	0.52111	0.00018582	-5.2185	-0.0018608	-4.6974	-0.001675	356.57536946974193	24.395	0.39463	24.638	24.318	24.713	0.24251	0.10477	0.0010407	NaN	2.7352	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	886860	+		151	11424	72	73							0.17804518724642548
AARLRLLRV	9	Unmodified	_AARLRLLRV_					0	0	0			REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	356.576854	1066.70873	-0.0069679	-2.4846E-06	-7.0768	-0.0025234	-7.0837	-0.0025259	356.5738830668198	23.12	0.33959	24.334	24.134	24.473	1.2145	-0.19869	-0.00094718	NaN	2.7352	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	500970	+		152	11424	72	73							0.17804518724642548
AARLRLLRV	9	Unmodified	_AARLRLLRV_					0	0	0			REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	REV__ENST00000003912.7_2_1:24768609-24771678:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	356.576854	1066.70873	0.11355	4.0489E-05	-7.0113	-0.0025001	-6.8978	-0.0024596	356.574091402259	22.69	0.29844	24.341	24.169	24.467	1.6511	-0.19184	-0.00087713	NaN	2.7352	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	512880	+		153	11424	72	73							0.17804518724642548
AARLVGPPLT	10	Unmodified	_AARLVGPPLT_					0	0	0			REV__ENST00000536178.3_1_7:101944355-101950044:+|nuORF	REV__ENST00000536178.3_1_7:101944355-101950044:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2096740603447	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.385	1	99.465	98.965	99.965	0.080376								0	0	0	0.66218	1	41610	41610		0.77653	0.37582	1		+		154	13751	73	74	210	210					0.10006039576853709
AARPPRHL	8	Unmodified	_AARPPRHL_					0	0	0		chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1724120974541	2	459.275035	916.535518	1.5572	0.00071518	0.92479	0.00042473	2.482	0.0011399	459.2755350836831	67.019	0.3703	68.908	68.616	68.986	1.8889					16	11	2	0	0	0	2.3239	1	28021	28021		2.8892	0.58649	1	504900			155	183	74	75	211	211					0.07391152668208179
AARVATRT	8	Unmodified	_AARVATRT_					0	0	0			REV__nc|ENSG00000005381|P05164-2|MPO	REV__nc|ENSG00000005381|P05164-2|MPO	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2529785037041	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.63	1	114.63	114.13	115.13	0								0	0	0	1.0178	1	49488	49488		2.3027	0	1		+		156	8497	75	76	212	212					0.05943453677366506
AASAGSRK	8	Unmodified	_AASAGSRK_					0	0	0			REV__ENST00000584214.1_1_17:16253243-16256750:-|nuORF	REV__ENST00000584214.1_1_17:16253243-16256750:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.0999633669853	2	374.209027	746.403501	-1.1174	-0.00041813	-2.5298	-0.00094666	-3.6471	-0.0013648	374.20836963775525	12.302	0.19	12.996	12.852	13.042	0.69396					9	5	2	0	0	0	2.3239	1	5101	5101		5.7604	0	1	232770	+		157	10831	76	77	213	213					0.0201550286061547
AASAGSRK	8	Unmodified	_AASAGSRK_					0	0	0			REV__ENST00000584214.1_1_17:16253243-16256750:-|nuORF	REV__ENST00000584214.1_1_17:16253243-16256750:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	374.209027	746.403501	-0.20732	-7.7581E-05	-8.0865	-0.003026	-8.2938	-0.0031036	374.2051980714264	12.138	0.12635	12.926	12.845	12.971	0.78751	-0.035311	-0.0031906	NaN	5.7604	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362670	+		158	10831	76	77							0.0201550286061547
AASLLIKLW	9	Unmodified	_AASLLIKLW_					0	0	0		ENST00000475031.5_1_7:89916952-89929393:+|nuORF;nc|ENSG00000105792|A5D8W1-2|CFAP69;CFAP69|p.A899Gfs*2|1|0.08|ENSG00000105792|chr7:90310105-90310127|CTGCCCGATTAGTAGGAGGACCT/-|frameshift_variant;nc|ENSG00000105792|A5D8W1-5|CFAP69;ENSG00000105792|ENST00000389297|CFAP69	ENST00000475031.5_1_7:89916952-89929393:+|nuORF	ENST00000475031.5_1_7:89916952-89929393:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8234130740166	2	507.820953	1013.62735	3.746	0.0019023	-1.0737	-0.00054526	2.6723	0.001357	507.8208643024067	74.203	0.42924	75.521	75.31	75.739	1.318					35	13	3	0	0	0	0.066815	1	31159	31159		61.357	39.611	1	2069300			159	152	77	78	214	214					0.12108398242025942
AASLLIKLW	9	Unmodified	_AASLLIKLW_					0	0	0		ENST00000475031.5_1_7:89916952-89929393:+|nuORF;nc|ENSG00000105792|A5D8W1-2|CFAP69;CFAP69|p.A899Gfs*2|1|0.08|ENSG00000105792|chr7:90310105-90310127|CTGCCCGATTAGTAGGAGGACCT/-|frameshift_variant;nc|ENSG00000105792|A5D8W1-5|CFAP69;ENSG00000105792|ENST00000389297|CFAP69	ENST00000475031.5_1_7:89916952-89929393:+|nuORF	ENST00000475031.5_1_7:89916952-89929393:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8219787478447	2	507.820953	1013.62735	2.9777	0.0015121	-1.0573	-0.00053694	1.9204	0.00097521	507.8209856652352	73.672	0.49348	75.468	75.224	75.717	1.7962					35	15	3	0	0	0	0.033504	1	30892	30892		81.89	49.585	1	1561500			160	152	77	78	215	215					0.12108398242025942
AASLSFVIV	9	Unmodified	_AASLSFVIV_					0	0	0			REV__nc|ENSG00000118162|Q9Y664-2|KPTN	REV__nc|ENSG00000118162|Q9Y664-2|KPTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7684509158134	2	453.768386	905.522219	1.7202	0.00078059	-3.4479	-0.0015645	-1.7277	-0.00078396	453.7675305820949	66.612	0.30428	68.501	68.341	68.646	1.8889					16	9	2	0	0	0	0.27148	1	27933	27933		26.884	5.137	1	1269100	+		161	9513	78	79	216	216					0.0656785704561571
AASLSFVIV	9	Unmodified	_AASLSFVIV_					0	0	0			REV__nc|ENSG00000118162|Q9Y664-2|KPTN	REV__nc|ENSG00000118162|Q9Y664-2|KPTN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	453.768386	905.522219	2.0195	0.00091641	-3.4373	-0.0015597	-1.4178	-0.00064334	453.76743134128304	67.184	0.33413	68.573	68.31	68.644	1.3888	0.035849	4.4753E-06	NaN	26.884	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	990150	+		162	9513	78	79							0.0656785704561571
AASLSFVIV	9	Unmodified	_AASLSFVIV_					0	0	0			REV__nc|ENSG00000118162|Q9Y664-2|KPTN	REV__nc|ENSG00000118162|Q9Y664-2|KPTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	453.768386	905.522219	1.7202	0.00078059	-3.4479	-0.0015645	-1.7277	-0.00078396	453.7675305820949	66.612	0.30428	68.501	68.341	68.646	1.8889	-0.035849	-5.1301E-06	NaN	26.884	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1269100	+		163	9513	78	79							0.0656785704561571
AASLVKEVVIP	11	Unmodified	_AASLVKEVVIP_					0	0	0		tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3489868044853	2	563.347532	1124.68051	1.8739	0.0010557	1.3191	0.00074309	3.193	0.0017988	563.3479524823888	61.86	0.30978	62.19	62.012	62.321	0.32974					23	9	3	0	0	0	0.74096	1	25931	25931		17.113	3.2068	1	1531700			164	17145	79	80	217	217					0.12315731234048144
AASLVKEVVIP	11	Unmodified	_AASLVKEVVIP_					0	0	0		tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	tr|A0A7D6ZTU3|A0A7D6ZTU3_9CLOTStageVsporulationproteinDOS=ClostridiumintestinaleOX=36845GN=HZF06_14695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3498412966728	2	563.347532	1124.68051	3.3072	0.0018631	0.5455	0.0003073	3.8527	0.0021704	563.3474022422407	60.684	0.31584	62.104	61.933	62.249	1.4196					23	9	3	0	0	0	0.74096	1	25421	25421		17.113	3.2068	1	3315900			165	17145	79	80	218	218					0.12315731234048144
AASNVRGSL	9	Unmodified	_AASNVRGSL_					0	0	0		ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7395812869072	2	437.740691	873.466829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.116	1	42.442	41.942	42.942	1.3254								0	0	0	0.40883	1	17242	17242		7.9102	1.5561	1				166	2821	80	81	219	219					0.025034435778479747
AASPIITLV	9	Unmodified	_AASPIITLV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5446655154228	1	884.545145	883.537869	1.6782	0.0014844	-1.6168	-0.0014301	0.061358	5.4274E-05	884.5441530823313	67.134	0.5528	68.523	68.215	68.768	1.3887					45	17	3	0	0	0	0.013238	3	28190	28088;28136;28190		104.8	19.442	1	11379000			167	2517	81	82	220;221;222	222					0.09144143562650697
AASPIITLV	9	Unmodified	_AASPIITLV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.7758361697197	2	442.776211	883.537869	2.0397	0.00090314	0.14655	6.489E-05	2.1863	0.00096803	442.77562197330656	67.184	0.52147	68.573	68.246	68.768	1.3888					24	16	2	0	0	0	0.076627	1	28192	28192		57.471	13.064	1	4668200			168	2517	81	82	223	223					0.09144143562650697
AASPIITLV	9	Unmodified	_AASPIITLV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5457641482353	1	884.545145	883.537869	1.3686	0.0012106	-1.6222	-0.0014349	-0.25352	-0.00022425	884.5440887220577	66.653	0.51896	68.542	68.245	68.764	1.8889					42	16	3	0	0	0	0.026628	3	27939	27891;27939;27991		92.822	18.399	1	11963000			169	2517	81	82	224;225;226	225					0.09144143562650697
AASPIITLV	9	Unmodified	_AASPIITLV_					0	0	0		ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.7761108279228	2	442.776211	883.537869	1.6322	0.00072268	-1.2882	-0.00057038	0.34397	0.0001523	442.77593321757433	66.622	0.51896	68.511	68.245	68.764	1.8889					31	16	3	0	0	0	0.031324	2	27966	27913;27966		85.357	27.885	1	4771000			170	2517	81	82	227;228	228					0.09144143562650697
AASRLSTVL	9	Unmodified	_AASRLSTVL_					0	0	0			REV__chr2:19999277-20004020|399|13.78|0.79|4.13|+|2|WDR35-DT,WDR35-DT|1	REV__chr2:19999277-20004020|399|13.78|0.79|4.13|+|2|WDR35-DT,WDR35-DT|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1734191775322	2	459.274367	916.53418	2.2697	0.0010424	1.8603	0.00085439	4.13	0.0018968	459.2750533646247	68.001	0.48763	69.378	69.065	69.553	1.3778					22	15	2	0	0	0	0.116	1	28550	28550		2.3027	0	1	1069600	+		171	8300	82	83	229	229					0.07257473788797597
AASSIQRVL	9	Unmodified	_AASSIQRVL_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7794372439384	2	472.779816	943.545079	1.4989	0.00070867	-2.4521	-0.0011593	-0.95319	-0.00045065	472.7781862131577	25.089	0.20948	26.349	26.258	26.468	1.2594					13	6	3	0	0	0	0.23535	1	10506	10506		29.082	10.947	1	545320			172	2865	83	84	230	230					0.07104876163089102
AASSIQRVL	9	Unmodified	_AASSIQRVL_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7796508669853	2	472.779816	943.545079	0.90309	0.00042696	-1.9988	-0.00094499	-1.0957	-0.00051803	472.77852773139864	24.762	0.21405	26.446	26.298	26.513	1.6845					10	6	2	0	0	0	0.44512	1	10349	10349		18.146	5.9057	1	474980			173	2865	83	84	231	231					0.07104876163089102
AASSVRVTF	9	Unmodified	_AASSVRVTF_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.2591430544853	2	469.258717	936.50288	1.2112	0.00056834	1.0147	0.00047614	2.2258	0.0010445	469.2590461699516	28.133	0.23921	29.412	29.276	29.515	1.2789					15	7	3	0	0	0	0.24056	1	11785	11785		28.495	10.348	1	863160			174	2924	84	85	232	232					0.032089007547028814
AASSVRVTF	9	Unmodified	_AASSVRVTF_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2586547732353	2	469.258717	936.50288	1.0569	0.00049596	0.71471	0.00033538	1.7716	0.00083135	469.2589188800958	27.583	0.2766	29.359	29.233	29.51	1.7754					14	8	2	0	0	0	0.16434	1	11548	11548		37.075	19.962	1	757610			175	2924	84	85	233	233					0.032089007547028814
AATHDEGCCI	10	Unmodified	_AATHDEGCCI_					0	0	0			REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	509.8053771853447	2	510.199684	1018.38482	1.9054	0.00097214	-0.95081	-0.00048511	0.95459	0.00048703	510.19885582824213	67.419	0.34503	67.742	67.619	67.964	0.32269					17	10	2	0	0	0	0.12519	1	28227	28227		7.2892	1.5288	1	560780	+		176	14181	85	86	234	234					-0.12364162887763541
AATKKKAPKP	10	Unmodified	_AATKKKAPKP_					0	0	0			REV__tr|A0A553SNJ4|A0A553SNJ4_NIACIPhagetailproteinOS=NialliacirculansOX=1397GN=CEQ21_24380PE=4SV=1	REV__tr|A0A553SNJ4|A0A553SNJ4_NIACIPhagetailproteinOS=NialliacirculansOX=1397GN=CEQ21_24380PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2238342165947	3	347.225598	1038.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.244	1	46.188	45.688	46.688	1.9438								0	0	0	0.66222	1	18548	18548		0.69767	0.42865	1		+		177	15056	86	87	235	235					0.13718301502285613
AATTVLIPV	9	Unmodified	_AATTVLIPV_					0	0	0			REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.7770263552666	2	442.776211	883.537869	2.0397	0.00090314	0.14655	6.489E-05	2.1863	0.00096803	442.77562197330656	67.184	0.52147	68.573	68.246	68.768	1.3888					24	16	2	0	0	0	0.20838	1	28141	28141		32.117	1.8922	1	4668200	+		178	13676	87	88	236	236					0.09144143562650697
AAVALAVLV	9	Unmodified	_AAVALAVLV_					0	0	0		ENSG00000269855|ENST00000601382|RNF225	ENSG00000269855|ENST00000601382|RNF225	ENSG00000269855|ENST00000601382|RNF225	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.7743408083916	2	413.773471	825.53239	1.6394	0.00067832	-0.38317	-0.00015854	1.2562	0.00051978	413.77388389516113	79.405	0.21494	81.121	81.046	81.261	1.7167					9	6	2	0	0	0	0.16975	1	33314	33314		36.466	8.2929	1	611900			179	5443	88	89	237	237					0.1126446477086347
AAVAVSVPFL	10	Unmodified	_AAVAVSVPFL_					0	0	0		nc|ENSG00000008277|Q9P0K1-4|ADAM22;nc|ENSG00000008277|Q9P0K1-3|ADAM22;nc|ENSG00000008277|Q9P0K1-5|ADAM22;nc|ENSG00000008277|Q9P0K1-2|ADAM22;nc|ENSG00000008277|Q9P0K1|ADAM22;ENSG00000008277|ENST00000413139|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	nc|ENSG00000008277|Q9P0K1-4|ADAM22	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.2918578982353	2	487.289485	972.564418	2.9498	0.0014374	-3.0158	-0.0014696	-0.066077	-3.2199E-05	487.28857098384697	72.506	0.12042	73.836	73.762	73.883	1.3297					5	3	2	0	0	0	0.12475	1	30444	30444		12.532	1.4171	1	1280700			180	528	89	90	238	238					0.07703832454001258
AAVENFRM	8	Unmodified	_AAVENFRM_					0	0	0			REV__ENST00000373662.3_1_X:71406282-71416775:+|nuORF	REV__ENST00000373662.3_1_X:71406282-71416775:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2335082888603	2	469.231645	936.448736	1.8372	0.00086208	0.23938	0.00011232	2.0766	0.0009744	469.2316886982113	66.639	0.3623	68.528	68.341	68.704	1.8889					27	11	3	0	0	0	0.88409	1	27932	27932		6.3541	0	1	2251400	+		181	9066	90	91	239	239					-0.022030146685096952
AAVGLKPYV	9	Unmodified	_AAVGLKPYV_					0	0	0		tr|A0A553SQT0|A0A553SQT0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07205PE=4SV=1	tr|A0A553SQT0|A0A553SQT0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07205PE=4SV=1	tr|A0A553SQT0|A0A553SQT0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07205PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1734191775322	2	459.276378	916.538203	1.7279	0.0007936	-1.4163	-0.00065047	0.31165	0.00014313	459.2758923258331	67.451	0.39877	69.321	69.059	69.458	1.87					16	12	2	0	0	0	0.11787	1	28315	28315		5.2307	0	1	550840			182	16528	91	92	240	240					0.07659563282504678
AAVLITVVTPL	11	Unmodified	_AAVLITVVTPL_					0	0	0		ENSG00000196099|ENST00000309154|OR6M1	ENSG00000196099|ENST00000309154|OR6M1	ENSG00000196099|ENST00000309154|OR6M1	MSMS	GG20161007_CRH_Patient100_A02_01	1	366.2368957400322	3	366.237392	1095.69035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.59	1	33.59	33.09	34.09	0								0	0	0	0.63775	1	14075	14075		1.3296	0.25818	1				183	4912	92	93	241	241					0.14632919239420517
AAVLLAVYY	9	Unmodified	_AAVLLAVYY_					0	0	0		ENSG00000257704|ENST00000552360|INAFM1	ENSG00000257704|ENST00000552360|INAFM1	ENSG00000257704|ENST00000552360|INAFM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7849609255791	2	491.784036	981.553519	2.4904	0.0012247	0.19919	9.7961E-05	2.6896	0.0013227	491.7840348643684	75.66	0.82059	76.966	76.799	77.62	1.3063					66	26	3	0	0	0	0.24585	1	31918	31918		28.173	0	1	8748200			184	5410	93	94	242	242					0.062004300797070755
AAVPMVLSA	9	Unmodified	_AAVPMVLSA_					0	0	0		nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.4758788943291	1	858.475351	857.468075	0.75744	0.00065024	-0.51585	-0.00044284	0.24159	0.0002074	858.475198328017	52.669	0.4085	54.066	53.836	54.244	1.3966					33	12	3	0	0	0	0.0068741	3	22004	22004;22052;22092		114.94	62.675	1	14077000			185	3871	94	95	243;244;245	243					0.03363941622399125
AAVPMVLSA	9	Unmodified	_AAVPMVLSA_					0	0	0		nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.4769775271416	1	858.475351	857.468075	1.2708	0.001091	-0.26213	-0.00022503	1.0087	0.00086595	858.4754310782864	52.066	0.45807	54.038	53.831	54.289	1.9722					35	14	3	0	0	0	0.0045981	3	21819	21776;21819;21868		123.1	61.739	1	11913000			186	3871	94	95	246;247;248	247					0.03363941622399125
AAVPMVLSA	9	Unmodified	_AAVPMVLSA_					0	0	0		nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MSMS	GG20161007_CRH_Patient100_W632_02	4	429.7422057986259	2	429.741314	857.468075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.097	1	54.069	53.569	54.569	1.9722								0	0	0	0.11829	1	21832	21832		32.117	16.27	1				187	3871	94	95	249	249					0.03363941622399125
AAVPVRPRRG	10	Unmodified	_AAVPVRPRRG_					0	0	0		ENSG00000205089|ENST00000378731|CCNI2;nc|ENSG00000205089|Q6ZMN8-3|CCNI2;nc|ENSG00000205089|Q6ZMN8-2|CCNI2	ENSG00000205089|ENST00000378731|CCNI2	ENSG00000205089|ENST00000378731|CCNI2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.8340942263603	2	539.833249	1077.65194	1.6164	0.00087257	0.035741	1.9294E-05	1.6521	0.00089186	539.8333612615197	78.597	0.55887	78.597	78.409	78.968	0					42	17	4	0	0	0	0.89803	1	32760	32760		1.6526	0.85899	1	1743300			188	5173	95	96	250	250					0.1162247116810704
AAVQTEEQY	9	Unmodified	_AAVQTEEQY_					0	0	0		ENST00000490812.5_1_2:131128247-131129758:+|nuORF;nc|ENSG00000072135|Q99952-2|PTPN18;ENSG00000072135|ENST00000175756|PTPN18	ENST00000490812.5_1_2:131128247-131129758:+|nuORF	ENST00000490812.5_1_2:131128247-131129758:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.8325073122978	3	346.829461	1037.46655	2.2997	0.00079762	3.6785	0.0012758	5.9782	0.0020734	346.83160750399304	75.068	1.2533	76.85	76.45	77.704	1.7817					79	40	4	0	0	0	0.76103	1	31468	31468		4.897	0.70751	1	1440100			189	878	96	97	251	251					-0.050680209326628756
AAVVSGPK	8	Unmodified	_AAVVSGPK_					0	0	0			REV__MECP2|p.D407Afs*2|1|0.1|ENSG00000169057|chrX:154030608-154030608|T/-|frameshift_variant	REV__MECP2|p.D407Afs*2|1|0.1|ENSG00000169057|chrX:154030608-154030608|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	365.1928283572197	2	364.718696	727.422839	-0.22226	-8.1062E-05	3.4562	0.0012605	3.234	0.0011795	364.7196359033089	13.242	0.29525	14.069	13.934	14.229	0.82788					13	10	2	0	0	0	2.3239	1	5518	5518		2.5775	0	1	703010	+		190	10928	97	98	252	252					0.04822459151523617
AAWPLFWI	8	Unmodified	_AAWPLFWI_					0	0	0			REV__ENST00000393784.7_1_5:172378203-172378416:+|nuORF	REV__ENST00000393784.7_1_5:172378203-172378416:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7742797732353	2	502.273638	1002.53272	2.5196	0.0012655	0.032099	1.6122E-05	2.5517	0.0012817	502.7749292386678	74.911	0.68451	76.693	76.481	77.166	1.7817					44	21	3	0	0	0	0.88409	1	31585	31585		6.3541	1.1234	1	2641300	+		191	12819	98	99	253	253					0.031558844907067396
AAYAESYH	8	Unmodified	_AAYAESYH_					0	0	0		ENSG00000185215|ENST00000560869|TNFAIP2;chr14:103121499-103123437|388|11.02|0.0|20.07|+|ENST00000333007|TNFAIP2,TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.1969177126884	2	456.198325	910.382096	1.6482	0.0007519	-2.472	-0.0011277	-0.82381	-0.00037582	456.1971465174034	52.09	0.33817	54.062	53.862	54.2	1.9722					18	10	2	0	0	0	0.88504	1	21848	21848		5.7604	0.52976	1	2135900			192	198	99	100	254	254					-0.07667926958765747
AAYFGYNL	8	Unmodified	_AAYFGYNL_					0	0	0		tr|A0A7D6VX66|A0A7D6VX66_9CLOTPucRfamilytranscriptionalregulatorligand-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07160PE=3SV=1	tr|A0A7D6VX66|A0A7D6VX66_9CLOTPucRfamilytranscriptionalregulatorligand-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07160PE=3SV=1	tr|A0A7D6VX66|A0A7D6VX66_9CLOTPucRfamilytranscriptionalregulatorligand-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07160PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1728698611259	2	459.721436	917.428318	1.4337	0.00065908	-3.1876	-0.0014654	-1.754	-0.00080635	459.7202078177197	51.815	0.4928	53.787	53.616	54.109	1.9722					23	15	2	0	0	0	2.3239	1	21820	21820		2.5775	1.7838	1	1394300			193	16980	100	101	255	255					-0.03369862056672446
AAYHLIIEL	9	Unmodified	_AAYHLIIEL_					0	0	0		nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF;ENST00000557380.5_1_14:50304918-50319471:-|nuORF;nc|ENSG00000165525|O60524-5|NEMF	nc|ENSG00000165525|O60524-3|NEMF	nc|ENSG00000165525|O60524-3|NEMF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.2560912966728	2	521.800217	1041.58588	2.7261	0.0014225	-1.1107	-0.00057957	1.6154	0.00084293	521.8008912843837	65.594	0.49043	66.993	66.757	67.247	1.3989					30	15	4	0	0	0	0.094078	1	27493	27493		18.135	5.2624	1	1149600			194	3844	101	102	256	256					0.0667521748271156
AAYQSVRIL	9	Unmodified	_AAYQSVRIL_					0	0	0		nc|ENSG00000110013|Q9HAT2-2|SIAE;ENSG00000110013|ENST00000263593|SIAE	nc|ENSG00000110013|Q9HAT2-2|SIAE	nc|ENSG00000110013|Q9HAT2-2|SIAE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7955810427666	2	510.795466	1019.57638	0.59682	0.00030485	0.89977	0.0004596	1.4966	0.00076445	510.7957979034109	35.845	0.27471	37.121	36.993	37.268	1.2762					30	18	2	0	0	0	0.04812	1	15063	15063		69.105	25.247	1	1639500			195	1688	102	103	257	257					0.06737449197191836
ACALLLATR	9	Unmodified	_ACALLLATR_					0	0	0			REV__ENSG00000181626|ENST00000587848|ANKRD62	REV__ENSG00000181626|ENST00000587848|ANKRD62	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1846801638603	3	311.184634	930.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.97	1	104.14	103.64	104.64	0.1731								0	0	0	0.42693	1	43902	43902		0.96228	0.56156	1		+		196	11327	103	104	258	258					0.06402721779352305
ACELHVAGFDF	11	Unmodified	_ACELHVAGFDF_					0	0	0		ENSG00000174684|ENST00000311181|B4GAT1	ENSG00000174684|ENST00000311181|B4GAT1	ENSG00000174684|ENST00000311181|B4GAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7725707888603	2	604.773874	1207.53319	2.028	0.0012265	-2.7842	-0.0016838	-0.75615	-0.0004573	604.7723106840883	48.387	1.5749	50.364	49.837	51.412	1.9772					138	50	3	0	0	0	0.85967	1	20190	20190		12.241	1.4167	1	4746800			197	4337	104	105	259	259					-0.062271086424289024
ACPMGSGF	8	Unmodified	_ACPMGSGF_					0	0	0			REV__ENST00000537638.6_1_12:57908621-57908798:+|nuORF	REV__ENST00000537638.6_1_12:57908621-57908798:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1554748415947	2	385.154017	768.293481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.03	1	103.21	102.71	103.71	0.18066								0	0	0	1.0178	1	43357	43357		2.5775	1.8871	1		+		198	13762	105	106	260	260					-0.09993381794436118
ACYDVTEYPV	10	Unmodified	_ACYDVTEYPV_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP;MPRIP|p.K652Sfs*24|1|0.17|ENSG00000133030|chr17:17158910-17158910|A/-|frameshift_variant;nc|ENSG00000133030|Q6WCQ1-3|MPRIP;nc|ENSG00000133030|Q6WCQ1|MPRIP;nc|ENSG00000133030|Q6WCQ1-2|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	580.2537109255791	2	580.25244	1158.49033	1.7122	0.0009935	-0.42631	-0.00024737	1.2859	0.00074613	580.2518708780702	72.898	0.37547	72.898	72.715	73.09	0					26	11	3	0	0	0	0.78468	1	30376	30376		13.906	3.0821	1	2274300			199	2556	106	107	261	261					-0.08257923490509711
ADAVEAYR	8	Unmodified	_ADAVEAYR_					0	0	0			REV__ENSG00000147113|ENST00000398000|DIPK2B	REV__ENSG00000147113|ENST00000398000|DIPK2B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	447.3469726443291	2	447.719424	893.424296	0.63415	0.00028392	-1.1803	-0.00052844	-0.54613	-0.00024451	447.71878522493404	21.542	0.21304	23.157	23.05	23.263	1.6158					10	6	2	0	0	0	2.3239	1	9023	9023		4.756	0.42677	1	437680	+		200	10321	107	108	262	262					-0.02667951550381531
ADFCMGMY	8	Unmodified	_ADFCMGMY_					0	0	0		nc|ENSG00000165409|P16473|TSHR;ENSG00000165409|ENST00000298171|TSHR	nc|ENSG00000165409|P16473|TSHR	nc|ENSG00000165409|P16473|TSHR	MSMS	GG20161007_CRH_Patient100_W632_02	4	313.1138183474541	3	313.11327	936.317981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.45	1	32.266	31.766	32.766	1.8151								0	0	0	1.0178	1	12765	12765		1.8442	0	1				201	3835	108	109	263	263					-0.15272489703215797
ADFCMGMY	8	Unmodified	_ADFCMGMY_					0	0	0		nc|ENSG00000165409|P16473|TSHR;ENSG00000165409|ENST00000298171|TSHR	nc|ENSG00000165409|P16473|TSHR	nc|ENSG00000165409|P16473|TSHR	MSMS	GG20161007_CRH_Patient100_W632_02	4	313.1137267947197	3	313.11327	936.317981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.585	1	32.401	31.901	32.901	1.8151								0	0	0	1.0178	1	12821	12821		0.45834	0	1				202	3835	108	109	264	264					-0.15272489703215797
ADGDGFHG	8	Unmodified	_ADGDGFHG_					0	0	0			REV__ENST00000482993.6_3_10:135272457-135273512:+|nuORF	REV__ENST00000482993.6_3_10:135272457-135273512:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1526061892509	2	388.153917	774.293281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.691	1	21.691	21.191	22.191	0								0	0	0	1.0178	1	9019	9019		0.69038	0.69038	1		+		203	11851	109	110	265	265					-0.10289342198416307
ADIGLYTNGK	10	Unmodified	_ADIGLYTNGK_					0	0	0			REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1051.550341784954	1	1051.54185	1050.53457	2.7209	0.0028612	3.6491	0.0038372	6.37	0.0066984	1051.545558682631	86.5	0.39273	86.5	86.277	86.67	0					28	12	3	0	0	0	0.10797	1	36042	36042		62.573	11.718	1	4377500	+		204	15348	110	111	266	266					0.011328487179980584
ADIGLYTNGK	10	Unmodified	_ADIGLYTNGK_					0	0	0			REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1051.545336902142	1	1051.54185	1050.53457	3.1378	0.0032995	1.491	0.0015678	4.6288	0.0048673	1051.5434570704933	86.013	0.39669	86.265	86.006	86.402	0.25227					29	12	3	0	0	0	0.066517	1	35913	35913		71.922	21.067	1	5699800	+		205	15348	110	111	267	267					0.011328487179980584
ADLLLSLVS	9	Unmodified	_ADLLLSLVS_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.5527831912041	1	930.550625	929.543348	2.2793	0.002121	-0.56294	-0.00052384	1.7163	0.0015971	930.5494549792984	82.591	0.33469	82.871	82.704	83.039	0.2802					19	10	2	0	0	0	0.27148	1	34602	34602		26.884	0	1	2034300	+		206	9123	111	112	268	268					0.07575822354465345
ADLMSAIVV	9	Unmodified	_ADLMSAIVV_					0	0	0		tr|A0A7D6ZSU6|A0A7D6ZSU6_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_17445PE=3SV=1	tr|A0A7D6ZSU6|A0A7D6ZSU6_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_17445PE=3SV=1	tr|A0A7D6ZSU6|A0A7D6ZSU6_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_17445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.4999877810478	1	918.496481	917.489204	2.4957	0.0022923	1.8943	0.0017399	4.3899	0.0040321	918.4995674594837	69.589	0.3455	71.442	71.262	71.608	1.853					15	10	2	0	0	0	0.09539	1	29194	29194		50.855	14.811	1	825610			207	17138	112	113	269	269					0.02715906931268819
ADREDDPNFF	10	Unmodified	_ADREDDPNFF_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	613.2609130740166	2	613.259642	1224.50473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.733	1	36.733	36.233	37.233	0								0	0	0	0.44856	1	15400	15400		27.223	9.0883	1				208	3217	113	114	270	270					-0.09854135018008492
ADREDDPNFF	10	Unmodified	_ADREDDPNFF_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	613.2610351443291	2	613.259642	1224.50473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.848	1	36.848	36.348	37.348	0								0	0	0	0.41642	1	15448	15448		28.495	10.36	1				209	3217	113	114	271	271					-0.09854135018008492
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.8751708865166	3	451.873841	1352.59969	0.93537	0.00042267	0.53567	0.00024206	1.471	0.00066473	451.87482645976024	23.672	1.659	23.672	23.229	24.888	0					184	53	6	0	0	0	0.026085	12	10003	9790;9834;9884;9923;9962;10003;10056;10109;10162;10220;10285;10335		93.928	77.062	1	170320000			210	3217	114	115	272;273;274;275;276;277;278;279;280;281;282;283	277					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3080932497978	2	677.307123	1352.59969	1.2261	0.00083046	-0.013136	-8.8972E-06	1.213	0.00082156	677.3071256377648	23.699	0.70641	23.699	23.412	24.118	0					75	22	5	0	0	0	0.0015808	5	9859	9813;9859;9910;9950;10010		171.76	154.64	1	21325000			211	3217	114	115	284;285;286;287;288	285					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.8755370974541	3	451.873841	1352.59969	0.99892	0.00045139	1.5293	0.00069105	2.5282	0.0011424	451.87447956538267	25.148	0.64469	25.148	24.858	25.503	0					51	20	3	0	0	0	0.56706	1	10424	10424		22.109	15.072	1	1194100			212	3217	114	115	289	289					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.8750488162041	3	451.873841	1352.59969	1.0266	0.0004639	1.2578	0.00056838	2.2845	0.0010323	451.87450650655484	25.826	0.9474	25.826	25.441	26.389	0					43	30	2	0	0	0	0.19145	1	10775	10775		40.714	26.496	1	1590600			213	3217	114	115	290	290					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.8744689822197	3	451.873841	1352.59969	1.3379	0.00060456	0.22235	0.00010047	1.5602	0.00070503	451.87404188378383	23.591	1.049	23.824	23.506	24.555	0.23306					104	33	5	0	0	0	0.022195	6	9818	9768;9818;9855;9894;9950;10019		97.749	83.531	1	40071000			214	3217	114	115	291;292;293;294;295;296	292					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3077270388603	2	677.307123	1352.59969	0.709	0.00048021	0.56066	0.00037974	1.2697	0.00085995	677.3074907729598	23.597	0.4057	23.83	23.597	24.003	0.23306					40	12	4	0	0	0	0.026887	3	9844	9799;9844;9899		111.33	89.797	1	4909900			215	3217	114	115	297;298;299	298					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	452.2029907107353	3	451.873841	1352.59969	1.4388	0.00065017	0.88122	0.0003982	2.3201	0.0010484	451.87437974213356	25.519	0.61576	25.771	25.428	26.044	0.25197					24	19	2	0	0	0	0.14309	1	10737	10737		23.964	14.2	1	554270			216	3217	114	115	300	300					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.8746520876884	3	451.873841	1352.59969	1.3789	0.00062309	-0.26631	-0.00012034	1.1126	0.00050276	451.87380742465984	22.629	0.6506	23.843	23.577	24.227	1.2145					65	20	5	0	0	0	0.032182	3	9445	9402;9445;9497		77.813	63.594	1	25715000			217	3217	114	115	301;302;303	302					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3077880740166	2	677.307123	1352.59969	0.89681	0.00060741	0.44266	0.00029982	1.3395	0.00090723	677.3072790256101	22.629	0.33894	23.843	23.64	23.979	1.2145					29	10	4	0	0	0	0.1806	2	9461	9413;9461		49.742	30.38	1	2624400			218	3217	114	115	304;305	305					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.8741027712822	3	451.873841	1352.59969	0.69837	0.00031557	-0.0041966	-1.8963E-06	0.69417	0.00031368	451.8739980174177	22.23	0.64023	23.846	23.61	24.25	1.6158					64	20	5	0	0	0	0.027481	3	9275	9228;9275;9330		85.417	69.679	1	18357000			219	3217	114	115	306;307;308	307					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3085815310478	2	677.307123	1352.59969	0.10553	7.1476E-05	0.9464	0.00064101	1.0519	0.00071248	677.3071860693236	22.23	0.30712	23.846	23.674	23.981	1.6158					20	9	3	0	0	0	0.16008	2	9258	9258;9309		46.475	31.227	1	2071500			220	3217	114	115	309;310	309					-0.06250201546845346
ADREDDPNFFK	11	Unmodified	_ADREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	451.873841	1352.59969	1.6153	0.00072991	-0.82139	-0.00037117	0.79389	0.00035874	452.2065878182994	24.446	0.33827	25.687	25.485	25.823	1.241	-0.074829	-0.0023715	NaN	23.964	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	156780			221	3217	114	115							-0.06250201546845346
ADSGFLDEMD	10	Unmodified	_ADSGFLDEMD_					0	0	0			REV__nc|ENSG00000166477|Q8WVC0-2|LEO1	REV__nc|ENSG00000166477|Q8WVC0-2|LEO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2184936404228	2	550.216054	1098.41756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.711	1	24.952	24.452	25.452	1.241								0	0	0	0.66166	1	9915	9915		1.6526	0.85899	1		+		222	10826	115	116	311	311					-0.12771677283922145
ADSGPLLVL	9	Unmodified	_ADSGPLLVL_					0	0	0			REV__TSPEAR|p.Q216R|1|0.76|ENSG00000175894|chr21:44529941-44529941|T/C|missense_variant	REV__TSPEAR|p.Q216R|1|0.76|ENSG00000175894|chr21:44529941-44529941|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5088378787041	1	884.50876	883.501483	1.6936	0.001498	0.22436	0.00019845	1.918	0.0016965	884.5089207619877	65.17	0.34158	67.078	66.907	67.248	1.9085					19	10	2	0	0	0	0.12174	1	27322	27322		42.095	2.1372	1	1575000	+		223	11165	116	117	312	312					0.055072666659384595
ADSILVEIF	9	Unmodified	_ADSILVEIF_					0	0	0		nc|ENSG00000166391|Q3SYC2-3|MOGAT2	nc|ENSG00000166391|Q3SYC2-3|MOGAT2	nc|ENSG00000166391|Q3SYC2-3|MOGAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.55040282011	1	1006.54554	1005.53826	2.8407	0.0028593	1.4728	0.0014824	4.3135	0.0043417	1006.5463103223943	79.781	0.43227	81.032	80.8	81.232	1.2512					26	13	3	0	0	0	0.10294	1	33453	33453		48.346	6.2513	1	2382900			224	7917	117	118	313	313					0.035715184918672094
ADSQLKLRVDI	11	Unmodified	_ADSQLKLRVDI_					0	0	0		ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3162719607353	3	419.910227	1256.70885	0.77115	0.00032382	1.7397	0.00073054	2.5109	0.0010544	420.2454675570005	29.71	0.15509	30.992	30.887	31.042	1.2825					5	4	2	0	0	0	0.14606	1	12460	12460		0.094841	0	1	247020			225	1877	118	119	314	314					0.09076429143328824
ADSTTTHK	8	Unmodified	_ADSTTTHK_					0	0	0		nc|ENSG00000168631|Q3MIW9|MUCL3;ENSG00000168631|ENST00000462446|MUCL3	nc|ENSG00000168631|Q3MIW9|MUCL3	nc|ENSG00000168631|Q3MIW9|MUCL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	2	430.709057	859.40356	-0.1392	-5.9955E-05	2.8607	0.0012321	2.7215	0.0011722	430.70925563832105	12.207	0.37894	12.901	12.759	13.137	0.69396					15	11	2	0	0	0	2.3239	1	5018	5018		8.5933	2.8329	1	608740			226	4046	119	120	315	315					-0.03176541930042731
AEAESMYQIK	10	Unmodified	_AEAESMYQIK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.2792236208916	2	585.278989	1168.54342	1.1056	0.0006471	-0.040175	-2.3514E-05	1.0654	0.00062358	585.2785451008492	22.314	0.22113	23.491	23.381	23.603	1.177					13	6	3	0	0	0	0.28421	1	9336	9336		40.239	20.877	1	1005500		+	227	343	120	121	316	316					-0.034105457078339896
AEAESMYQIK	10	Unmodified	_AEAESMYQIK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.2778198122978	2	585.278989	1168.54342	0.44869	0.00026261	0.1076	6.2974E-05	0.55629	0.00032558	585.2790577273744	21.944	0.27258	23.56	23.401	23.674	1.6158					17	8	3	0	0	0	0.2264	1	9141	9141		45.74	20.749	1	1009700		+	228	343	120	121	317	317					-0.034105457078339896
AEDWYHRRRDG	11	Unmodified	_AEDWYHRRRDG_					0	0	0			REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.5652648806572	3	487.564112	1459.67051	0.070263	3.4258E-05	2.3057	0.0011242	2.376	0.0011585	487.5652697243361	11.542	0.50606	12.304	11.973	12.479	0.76165					26	15	2	0	0	0	0.95289	2	4789	4789;4843		6.6235	2.7471	1	2110000	+		229	13220	121	122	318;319	318					-0.04094063718662255
AEDWYHRRRDG	11	Unmodified	_AEDWYHRRRDG_					0	0	0			REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	487.564112	1459.67051	0.41205	0.0002009	3.5713	0.0017412	3.9833	0.0019421	487.5657501475245	12.006	0.43097	12.006	11.665	12.096	0	-0.16469	0.0020086	NaN	6.6235	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1141300	+		230	13220	121	122							-0.04094063718662255
AEDWYHRRRDG	11	Unmodified	_AEDWYHRRRDG_					0	0	0			REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	487.564112	1459.67051	0.88297	0.0004305	1.4826	0.00072285	2.3656	0.0011534	487.56492593284804	12.045	0.40789	12.134	11.836	12.244	0.089381	-0.036244	-0.0010465	NaN	6.6235	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1366800	+		231	13220	121	122							-0.04094063718662255
AEDWYHRRRDG	11	Unmodified	_AEDWYHRRRDG_					0	0	0			REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	487.564112	1459.67051	-0.23266	-0.00011344	1.5763	0.00076853	1.3436	0.00065509	487.5653458117946	11.569	0.44118	12.238	12.045	12.486	0.66934	0.067667	-0.0009095	NaN	6.6235	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1527300	+		232	13220	121	122							-0.04094063718662255
AEDWYHRRRDG	11	Unmodified	_AEDWYHRRRDG_					0	0	0			REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	REV__ENST00000463847.1_1_6:38110907-38120162:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	487.564112	1459.67051	0.070263	3.4258E-05	2.3057	0.0011242	2.376	0.0011585	487.5652697243361	11.542	0.50606	12.304	11.973	12.479	0.76165	0.13327	0.0001575	NaN	6.6235	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2110000	+		233	13220	121	122							-0.04094063718662255
AEEVPLEPN	9	Unmodified	_AEEVPLEPN_					0	0	0			REV__ENSG00000130313|ENST00000252603|PGLS	REV__ENSG00000130313|ENST00000252603|PGLS	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.2453796267509	2	499.245472	996.476391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.066	1	14.894	14.394	15.394	0.82789								0	0	0	0.33839	1	5833	5833		14.838	2.5976	1		+		234	9780	122	123	320	320					-0.021988329272971896
AEFAEVSK	8	Unmodified	_AEFAEVSK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.7244445681572	2	440.724175	879.433798	0.42056	0.00018535	1.1117	0.00048997	1.5323	0.00067532	440.72448684648333	15.297	0.18545	16.123	16.014	16.2	0.82643					8	5	2	0	0	0	0.62137	1	6364	6364		38.176	12.776	1	653730		+	235	340	123	124	321	321					-0.010741832648591298
AEFAEVSK	8	Unmodified	_AEFAEVSK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.7245971560478	2	440.724175	879.433798	0.33053	0.00014567	0.92718	0.00040863	1.2577	0.0005543	440.72464989411554	15.198	0.169	16.095	15.99	16.159	0.89664					9	5	2	0	0	0	0.65369	1	6309	6309		34.932	9.5328	1	714720		+	236	340	123	124	322	322					-0.010741832648591298
AEFAEVSK	8	Unmodified	_AEFAEVSK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	440.724175	879.433798	0.26251	0.00011569	-0.65423	-0.00028834	-0.39172	-0.00017264	440.72413566028274	15.918	0.15483	15.918	15.838	15.993	0	-0.11059	-0.0011734	NaN	38.176	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262210		+	237	340	123	124							-0.010741832648591298
AEFAEVSK	8	Unmodified	_AEFAEVSK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	440.724175	879.433798	0.81815	0.00036058	-0.075604	-3.3321E-05	0.74255	0.00032726	440.72434913380647	15.848	0.15368	15.978	15.902	16.055	0.13022	-0.050472	-0.00066337	NaN	38.176	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378930		+	238	340	123	124							-0.010741832648591298
AEFEQHNS	8	Unmodified	_AEFEQHNS_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2065307497978	2	481.204138	960.393724	3.3813	0.0016271	1.1189	0.00053843	4.5002	0.0021655	481.204939968483	74.897	0.34216	75.221	75.051	75.393	0.32464					23	10	3	0	0	0	0.88351	1	31322	31322		6.7232	0.96273	1	1897800	+		239	9666	124	125	323	323					-0.08805729935420459
AEFVEVTK	8	Unmodified	_AEFVEVTK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	461.7484313845634	2	461.74765	921.480748	1.1596	0.00053543	0.0083697	3.8647E-06	1.1679	0.0005393	461.7475986567825	22.417	0.41869	22.417	22.245	22.664	0					38	13	4	0	0	0	0.34578	2	9314	9314;9355		66.457	22.598	1	14965000		+	240	341	125	126	324;325	324					0.016866762862946416
AEFVEVTK	8	Unmodified	_AEFVEVTK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	461.7476379275322	2	461.74765	921.480748	1.3519	0.00062425	-1.4024	-0.00064757	-0.050503	-2.332E-05	461.7471432330533	22.211	0.35316	22.434	22.259	22.612	0.223					29	11	3	0	0	0	0.47299	1	9266	9266		49.554	9.597	1	3500900		+	241	341	125	126	326	326					0.016866762862946416
AEFVEVTK	8	Unmodified	_AEFVEVTK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.7481567263603	2	461.74765	921.480748	1.2049	0.00055635	-0.93723	-0.00043276	0.26766	0.00012359	461.7473399929557	21.314	0.30168	22.491	22.357	22.658	1.177					20	9	3	0	0	0	0.58281	1	8918	8918		41.956	9.6501	1	1825600		+	242	341	125	126	327	327					0.016866762862946416
AEFVEVTK	8	Unmodified	_AEFVEVTK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1448852419853	2	461.74765	921.480748	0.72756	0.00033595	-1.0099	-0.00046632	-0.28234	-0.00013037	461.74764334837306	20.938	0.33222	22.512	22.32	22.652	1.5748					22	10	3	0	0	0	2.3239	1	8757	8757		19.257	9.1831	1	1295500		+	243	341	125	126	328	328					0.016866762862946416
AEHDSPGG	8	Unmodified	_AEHDSPGG_					0	0	0			REV__ENSG00000137142|ENST00000377694|IGFBPL1	REV__ENSG00000137142|ENST00000377694|IGFBPL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1530639529228	2	385.1592	768.303846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.18	103.68	104.68	0.1731								0	0	0	1.0178	1	43926	43926		0.69038	0	1		+		244	10013	126	127	329	329					-0.08957359543978782
AEIGSILAQI	10	Unmodified	_AEIGSILAQI_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7963134646416	2	507.795132	1013.57571	1.9298	0.00097995	0.20198	0.00010257	2.1318	0.0010825	507.79504843999194	66.974	0.31779	66.974	66.798	67.116	0					22	9	3	0	0	0	0.059378	1	27887	27887		74.929	3.7954	1	2588500	+	+	245	11021	127	128	330	330					0.06946609757460465
AEIGSILAQI	10	Unmodified	_AEIGSILAQI_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7960388064384	2	507.795132	1013.57571	1.9575	0.000994	-0.23398	-0.00011881	1.7235	0.00087519	507.7950202418693	64.983	0.40524	66.891	66.69	67.095	1.9085					40	12	4	0	0	0	0.092962	1	27298	27298		65.235	7.513	1	12095000	+	+	246	11021	127	128	331	331					0.06946609757460465
AEKKRLKRLRA	11	Unmodified	_AEKKRLKRLRA_					0	0	0			REV__DDX23|p.K674Rfs*106|1|0.2|ENSG00000174243|chr12:48832123-48832123|C/-|frameshift_variant	REV__DDX23|p.K674Rfs*106|1|0.2|ENSG00000174243|chr12:48832123-48832123|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	457.2220947146416	3	456.968522	1367.88374	1.3132	0.00060007	-3.6424	-0.0016645	-2.3292	-0.0010644	457.302261554248	105.9	0.19244	105.9	105.76	105.95	0					16	9	3	0	0	0	0.14606	1	44986	44986		0.08335	0.08335	1	15580000	+		247	8430	128	129	332	332					0.2145089379903311
AEKSHREKL	9	Unmodified	_AEKSHREKL_					0	0	0		ENSG00000151615|ENST00000281321|POU4F2;nc|ENSG00000151615|Q12837-2|POU4F2	ENSG00000151615|ENST00000281321|POU4F2	ENSG00000151615|ENST00000281321|POU4F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8117553591728	2	549.306729	1096.59891	1.907	0.0010475	-2.7758	-0.0015247	-0.86875	-0.00047721	549.3035087289288	68.138	0.61351	69.516	69.303	69.916	1.3778					48	19	3	0	0	0	0.44512	1	28724	28724		18.146	4.2403	1	9025700			248	3295	129	130	333	333					0.05447048594805892
AEMLPWVYKY	10	Unmodified	_AEMLPWVYKY_					0	0	0		tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2623779177666	3	433.886253	1298.63693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.34	1	110.49	109.99	110.99	0.15228								0	0	0	0.6624	1	47849	47849		0.13989	0	1				249	16623	130	131	334	334					-0.0004420153475166444
AEQEEEESPPV	11	Unmodified	_AEQEEEESPPV_					0	0	0			REV__ENSG00000136478|ENST00000584379|TEX2	REV__ENSG00000136478|ENST00000584379|TEX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	622.3646728396416	2	622.269872	1242.52519	-0.14023	-8.7259E-05	4.3266	0.0026923	4.1864	0.0026051	622.2728025114994	50.706	0.15154	52.682	52.606	52.757	1.9753					6	4	2	0	0	0	0.14606	1	21240	21240		1.3295	0	1	801280	+		250	9983	131	132	335	335					-0.08637009148833386
AEVIINPL	8	Unmodified	_AEVIINPL_					0	0	0			REV__tr|A0A553SJI5|A0A553SJI5_NIACISuperoxidedismutase[Cu-Zn]OS=NialliacirculansOX=1397GN=CEQ21_16905PE=3SV=1	REV__tr|A0A553SJI5|A0A553SJI5_NIACISuperoxidedismutase[Cu-Zn]OS=NialliacirculansOX=1397GN=CEQ21_16905PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7638732790947	2	434.760561	867.506569	4.2175	0.0018336	2.2071	0.00095955	6.4245	0.0027931	434.7617354365751	87.097	0.56007	88.189	87.899	88.459	1.0918					46	18	3	0	0	0	0.89051	1	36812	36812		2.3027	0	1	3952300	+		251	14907	132	133	336	336					0.06751570528570028
AEYGNVMETK	10	Unmodified	_AEYGNVMETK_					0	0	0			REV__nc|ENSG00000198720|Q86YJ7-2|ANKRD13B	REV__nc|ENSG00000198720|Q86YJ7-2|ANKRD13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5114318728447	3	381.177985	1140.51212	0.29308	0.00011172	2.5202	0.00096064	2.8133	0.0010724	381.18117549128453	27.544	1.6836	28.823	28.382	30.066	1.2789					108	54	3	0	0	0	0.79268	1	11764	11764		7.9454	0	1	1035200	+		252	11730	133	134	337	337					-0.052511187419213456
AFADSCVP	8	Unmodified	_AFADSCVP_					0	0	0			REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1796752810478	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.534	1	18.837	18.337	19.337	1.3023								0	0	0	1.0178	1	7283	7283		5.2307	2.3415	1		+		253	8897	134	135	338	338					-0.06929770233830368
AFAFAPYERT	10	Unmodified	_AFAFAPYERT_					0	0	0			REV__ENST00000576570.5_1_17:5389818-5391587:+|nuORF	REV__ENST00000576570.5_1_17:5389818-5391587:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7928954958916	2	586.790381	1171.56621	2.6352	0.0015463	0.38565	0.0002263	3.0209	0.0017726	586.7902231798836	60.991	0.4269	62.957	62.76	63.187	1.9653					23	13	2	0	0	0	0.72878	1	25632	25632		17.113	1.2657	1	1630400	+		254	13984	135	136	339	339					-0.012711585280840154
AFANFDLLR	9	Unmodified	_AFANFDLLR_					0	0	0			REV__tr|A0A553SPR5|A0A553SPR5_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26875PE=4SV=1	REV__tr|A0A553SPR5|A0A553SPR5_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26875PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1920043826103	2	533.787641	1065.56073	1.8173	0.00097003	2.9704	0.0015856	4.7877	0.0025556	533.7897249481571	50.07	0.53069	50.4	50.169	50.7	0.33019					41	16	3	0	0	0	0.11645	1	21080	21080		2.0598	1.4583	1	3407500	+		255	15102	136	137	340	340					0.030571626801247476
AFATVDLLV	9	Unmodified	_AFATVDLLV_					0	0	0			REV__ENST00000225737.10_1_17:19808319-19808406:-|nuORF	REV__ENST00000225737.10_1_17:19808319-19808406:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5449096560478	1	948.54006	947.532783	2.2365	0.0021214	0.75218	0.00071347	2.9886	0.0028349	948.5406799814609	82.995	0.52486	84.208	83.951	84.476	1.2125					49	16	4	0	0	0	0.15478	1	34897	34897		38.151	2.107	1	35106000	+		256	12091	137	138	341	341					0.05691839700057244
AFCFCCFWY	9	Unmodified	_AFCFCCFWY_					0	0	0		ENST00000555736.1_1_14:65714419-65769374:-|nuORF	ENST00000555736.1_1_14:65714419-65769374:-|nuORF	ENST00000555736.1_1_14:65714419-65769374:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2195922732353	2	595.218834	1188.42312	3.3256	0.0019795	-3.8047	-0.0022646	-0.47905	-0.00028514	595.2160764649326	91.952	0.32047	93.278	93.15	93.47	1.3269					15	9	2	0	0	0	0.75267	1	38730	38730		5.2307	1.2863	1	686910			257	7298	138	139	342	342					-0.16355948506793538
AFCFCCFWY	9	Unmodified	_AFCFCCFWY_					0	0	0		ENST00000555736.1_1_14:65714419-65769374:-|nuORF	ENST00000555736.1_1_14:65714419-65769374:-|nuORF	ENST00000555736.1_1_14:65714419-65769374:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	595.218834	1188.42312	4.2086	0.002505	-5.0666	-0.0030157	-0.85802	-0.00051071	595.215249675565	92.422	0.4568	93.358	93.082	93.539	0.93623	0.039742	-0.0007005	NaN	5.2307	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	983090			258	7298	138	139							-0.16355948506793538
AFDILQKVL	9	Unmodified	_AFDILQKVL_					0	0	0			REV__nc|ENSG00000153789|Q6ZTR7|CIBAR2	REV__nc|ENSG00000153789|Q6ZTR7|CIBAR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.7659789919853	2	523.815867	1045.61718	3.6637	0.0019191	1.0931	0.00057257	4.7568	0.0024917	523.8160302902945	90.873	0.34813	92.239	91.994	92.342	1.366					16	10	2	0	0	0	0.11463	1	38291	38291		12.532	3.1841	1	787280	+		259	10456	139	140	343	343					0.0961979051680828
AFEEFLQLLG	10	Unmodified	_AFEEFLQLLG_					0	0	0		nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.2718994021416	2	583.808239	1165.60193	1.4538	0.00084874	0.85701	0.00050033	2.3108	0.0013491	583.8078164000116	53.901	0.6804	55.302	55.086	55.767	1.4005					43	22	3	0	0	0	0.12461	1	22525	22525		10.074	4.777	1	2220900			260	5013	140	141	344	344					0.025748789289536944
AFFAEGTE	8	Unmodified	_AFFAEGTE_					0	0	0			REV__tr|A0A553SJU2|A0A553SJU2_NIACIPhosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_17510PE=4SV=1	REV__tr|A0A553SJU2|A0A553SJU2_NIACIPhosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_17510PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.1976196169853	2	436.195251	870.375948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.28	1	101.45	100.95	101.95	0.17032								0	0	0	1.0178	1	42617	42617		0.79363	0	1		+		261	14919	141	142	345	345					-0.06442445190270973
AFFEGPPFKF	10	Unmodified	_AFFEGPPFKF_					0	0	0		ENSG00000071127|ENST00000499869|WDR1;SKAP1-WDR1|2|fusion	ENSG00000071127|ENST00000499869|WDR1	ENSG00000071127|ENST00000499869|WDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.8021728396416	2	593.800217	1185.58588	3.5403	0.0021022	0.338	0.00020071	3.8783	0.0023029	593.799822204309	73.164	0.6917	74.494	74.036	74.728	1.3298					50	21	3	0	0	0	0.070292	3	30710	30663;30710;30768		70.332	32.358	1	3650400			262	865	142	143	346;347;348	347					0.0005121748270084936
AFFEGPPFKF	10	Unmodified	_AFFEGPPFKF_					0	0	0		ENSG00000071127|ENST00000499869|WDR1;SKAP1-WDR1|2|fusion	ENSG00000071127|ENST00000499869|WDR1	ENSG00000071127|ENST00000499869|WDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.8023559451103	2	593.800217	1185.58588	2.7358	0.0016245	1.1682	0.00069369	3.904	0.0023182	593.8001312926476	72.628	0.66043	74.438	74.011	74.671	1.8101					52	20	4	0	0	0	0.070292	2	30442	30442;30487		70.332	36.23	1	3767400			263	865	142	143	349;350	349					0.0005121748270084936
AFFSLYLML	9	Unmodified	_AFFSLYLML_					0	0	0		MAN2A2|p.V19F|1|0.07|ENSG00000196547|chr15:90904262-90904262|G/T|missense_variant	MAN2A2|p.V19F|1|0.07|ENSG00000196547|chr15:90904262-90904262|G/T|missense_variant	MAN2A2|p.V19F|1|0.07|ENSG00000196547|chr15:90904262-90904262|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7913696169853	2	552.793546	1103.57254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.548	1	49.524	49.024	50.024	1.976								0	0	0	0.14418	1	19915	19915		30.225	7.0764	1				264	7789	143	144	351	351					0.024896433791127492
AFGIIFLC	8	Unmodified	_AFGIIFLC_					0	0	0		ENST00000318217.9_1_17:30821488-30821716:-|nuORF	ENST00000318217.9_1_17:30821488-30821716:-|nuORF	ENST00000318217.9_1_17:30821488-30821716:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.2423278689384	2	442.24095	882.467346	2.8569	0.0012634	0.18182	8.0407E-05	3.0387	0.0013438	442.24083739466107	75.159	0.52798	76.941	76.668	77.196	1.7817					42	16	4	0	0	0	0.88958	1	31467	31467		2.8892	0	1	9532700			265	5835	144	145	352	352					0.021411469733493504
AFGNLRPVL	9	Unmodified	_AFGNLRPVL_					0	0	0		ITGAM|p.T819Lfs*17|1|0.13|ENSG00000169896|chr16:31325353-31325354|-/TTGGGGCTGACCCAGACTTGTGAGACCCTGA|frameshift_variant;ENSG00000169896|ENST00000544665|ITGAM;nc|ENSG00000169896|P11215-2|ITGAM	ITGAM|p.T819Lfs*17|1|0.13|ENSG00000169896|chr16:31325353-31325354|-/TTGGGGCTGACCCAGACTTGTGAGACCCTGA|frameshift_variant	ITGAM|p.T819Lfs*17|1|0.13|ENSG00000169896|chr16:31325353-31325354|-/TTGGGGCTGACCCAGACTTGTGAGACCCTGA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2289306521416	2	493.792727	985.5709	2.3008	0.0011361	3.3506	0.0016545	5.6514	0.0027906	493.7942992968089	58.711	0.33446	60.68	60.574	60.908	1.969					24	10	3	0	0	0	0.084274	1	24661	24661		23.148	0	1	5568500			266	4118	145	146	353	353					0.07753770405372507
AFHQLNQALF	10	Unmodified	_AFHQLNQALF_					0	0	0		ENST00000372725.5_1_10:76602697-76602946:+|nuORF	ENST00000372725.5_1_10:76602697-76602946:+|nuORF	ENST00000372725.5_1_10:76602697-76602946:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8135864138603	2	594.811648	1187.60874	2.4274	0.0014439	-0.6598	-0.00039246	1.7676	0.0010514	594.8108932809646	47.588	0.5688	48.97	48.759	49.328	1.3825					40	17	4	0	0	0	0.17319	3	19954	19868;19911;19954		52.268	26.869	1	5496300			267	6146	146	147	354;355;356	356					0.022442366001541814
AFHQLNQALF	10	Unmodified	_AFHQLNQALF_					0	0	0		ENST00000372725.5_1_10:76602697-76602946:+|nuORF	ENST00000372725.5_1_10:76602697-76602946:+|nuORF	ENST00000372725.5_1_10:76602697-76602946:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8126098513603	2	594.811648	1187.60874	2.4234	0.0014415	0.094351	5.6121E-05	2.5177	0.0014976	594.8116631642226	47.107	0.34726	49.083	48.87	49.217	1.976					32	10	4	0	0	0	0.17319	2	19682	19682;19733		52.268	19.483	1	6002200			268	6146	146	147	357;358	357					0.022442366001541814
AFHYLYFFRRP	11	Unmodified	_AFHYLYFFRRP_					0	0	0			REV__ENST00000592618.5_1_19:1010351-1011343:-|nuORF	REV__ENST00000592618.5_1_19:1010351-1011343:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2633239626884	3	506.266456	1515.77754	0.19832	0.00010041	-4.3624	-0.0022085	-4.1641	-0.0021081	506.2655502564302	13.404	0.40368	14.13	13.851	14.255	0.72639					18	12	2	0	0	0	1.0156	1	5580	5580		2.8433	1.5136	1	1436900	+		269	14078	147	148	359	359					0.040281382336615934
AFIEKHWTF	9	Unmodified	_AFIEKHWTF_					0	0	0		nc|ENSG00000149474|Q9H8E8-2|KAT14;ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.5385925173759	3	393.537953	1177.59203	1.4839	0.00058396	-0.39737	-0.00015638	1.0865	0.00042759	393.5378154574107	41.846	0.55278	43.172	42.94	43.493	1.3254					44	17	3	0	0	0	0.077188	3	17523	17523;17572;17625		57.249	43.634	1	11386000			270	3239	148	149	360;361;362	360					0.010337357142361725
AFIEKHWTF	9	Unmodified	_AFIEKHWTF_					0	0	0		nc|ENSG00000149474|Q9H8E8-2|KAT14;ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.8041259646416	2	589.803291	1177.59203	2.0817	0.0012278	-0.13242	-7.8103E-05	1.9493	0.0011497	589.8032958493509	41.936	0.48893	43.276	42.987	43.476	1.3399					36	15	3	0	0	0	0.025926	3	17525	17525;17573;17627		92.653	52.704	1	5441400			271	3239	148	149	363;364;365	363					0.010337357142361725
AFIEKHWTF	9	Unmodified	_AFIEKHWTF_					0	0	0		nc|ENSG00000149474|Q9H8E8-2|KAT14;ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.5380432009697	3	393.537953	1177.59203	1.7092	0.00067262	-1.3224	-0.00052043	0.38672	0.00015219	393.5375591136599	41.431	0.4851	43.324	43.088	43.573	1.8927					42	15	4	0	0	0	0.13623	3	17303	17303;17353;17402		40.239	28.064	1	10057000			272	3239	148	149	366;367;368	366					0.010337357142361725
AFIEKHWTF	9	Unmodified	_AFIEKHWTF_					0	0	0		nc|ENSG00000149474|Q9H8E8-2|KAT14;ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8040038943291	2	589.803291	1177.59203	1.9085	0.0011256	-0.98731	-0.00058232	0.92117	0.00054331	589.8029017349984	41.419	0.35712	43.312	43.119	43.476	1.8927					30	11	3	0	0	0	0.0051198	2	17355	17306;17355		145.13	99.43	1	6907400			273	3239	148	149	369;370	370					0.010337357142361725
AFIEKHWTF	9	Unmodified	_AFIEKHWTF_					0	0	0		nc|ENSG00000149474|Q9H8E8-2|KAT14;ENSG00000149474|ENST00000688188|KAT14;nc|ENSG00000149474|Q9H8E8|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	nc|ENSG00000149474|Q9H8E8-2|KAT14	MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8050414919853	2	589.803291	1177.59203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.563	1	43.456	42.956	43.956	1.8927								0	0	0	0.18526	1	17422	17422		29.082	16.039	1				274	3239	148	149	371	371					0.010337357142361725
AFILGSGLLSF	11	Unmodified	_AFILGSGLLSF_					0	0	0		ENST00000517448.5_1_5:154210261-154230090:-|nuORF;ENST00000423554.5_1_5:154202945-154230090:-|nuORF;nc|ENSG00000170271|Q96IV6-2|FAXDC2;ENSG00000170271|ENST00000326080|FAXDC2	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8224365115166	2	562.82115	1123.62775	3.7694	0.0021215	-1.164	-0.00065512	2.6054	0.0014664	562.8198910213125	97.365	0.12467	97.65	97.57	97.694	0.28442					9	4	3	0	0	0	0.0022383	1	40974	40974		149.99	41.998	1	5172100			275	4136	149	150	372	372					0.07087773171247136
AFILGSGLLSF	11	Unmodified	_AFILGSGLLSF_					0	0	0		ENST00000517448.5_1_5:154210261-154230090:-|nuORF;ENST00000423554.5_1_5:154202945-154230090:-|nuORF;nc|ENSG00000170271|Q96IV6-2|FAXDC2;ENSG00000170271|ENST00000326080|FAXDC2	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8207275271416	2	562.82115	1123.62775	3.2598	0.0018347	-2.5502	-0.0014353	0.7096	0.00039938	562.8197231295775	97.269	0.085571	97.575	97.508	97.594	0.3062					5	3	2	0	0	0	0.0022383	1	40922	40922		149.99	41.998	1	3520500			276	4136	149	150	373	373					0.07087773171247136
AFKKKAVKR	9	Unmodified	_AFKKKAVKR_					0	0	0			REV__ENSG00000138796|ENST00000309522|HADH	REV__ENSG00000138796|ENST00000309522|HADH	MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2403442263603	3	359.241471	1074.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.91	1	105.91	105.41	106.41	0								0	0	0	0.42693	1	45071	45071		0.26902	0.033176	1		+		277	10084	150	151	374	374					0.16822000493129963
AFKPILLLF	9	Unmodified	_AFKPILLLF_					0	0	0			REV__ENSG00000205667|ENST00000381130|ARSH	REV__ENSG00000205667|ENST00000381130|ARSH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.2508422732353	2	531.341521	1060.66849	2.8071	0.0014915	-3.0822	-0.0016377	-0.27514	-0.00014619	531.3396560251745	79.242	0.62408	80.508	80.347	80.971	1.2668					34	19	2	0	0	0	0.11463	1	33401	33401		12.532	4.6214	1	1102800	+		278	11819	151	152	375	375					0.14058159281512417
AFKPILLLF	9	Unmodified	_AFKPILLLF_					0	0	0			REV__ENSG00000205667|ENST00000381130|ARSH	REV__ENSG00000205667|ENST00000381130|ARSH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.2505370974541	2	531.341521	1060.66849	2.4418	0.0012974	-4.274	-0.0022709	-1.8322	-0.0009735	531.3386692782796	78.67	0.71271	80.405	80.227	80.94	1.735					37	22	2	0	0	0	0.10844	1	33203	33203		11.64	2.2572	1	1168900	+		279	11819	151	152	376	376					0.14058159281512417
AFKPILLLF	9	Unmodified	_AFKPILLLF_					0	0	0			REV__ENSG00000205667|ENST00000381130|ARSH	REV__ENSG00000205667|ENST00000381130|ARSH	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.341521	1060.66849	2.015	0.0010706	-3.0316	-0.0016108	-1.0167	-0.0005402	531.3397866460903	80.341	0.46548	80.632	80.437	80.902	0.29056	0.11673	0.00035884	NaN	16.942	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387860	+		280	11819	151	152							0.14058159281512417
AFKRPQFVS	9	Unmodified	_AFKRPQFVS_					0	0	0			REV__ENST00000543675.5_1_12:120995397-121001178:+|nuORF	REV__ENST00000543675.5_1_12:120995397-121001178:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	359.7332641482353	3	360.538064	1078.59236	0.37199	0.00013412	-1.2346	-0.00044513	-0.86263	-0.00031101	360.53776003662034	28.592	0.30292	30.368	30.213	30.516	1.7754					15	9	2	0	0	0	0.11909	1	11916	11916		2.4985	0.41248	1	632540	+		281	13795	152	153	377	377					0.05621155434073444
AFKRPQFVS	9	Unmodified	_AFKRPQFVS_					0	0	0			REV__ENST00000543675.5_1_12:120995397-121001178:+|nuORF	REV__ENST00000543675.5_1_12:120995397-121001178:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	360.538064	1078.59236	-0.27218	-9.813E-05	0.16932	6.1047E-05	-0.10285	-3.7083E-05	360.53806938436975	29.157	0.24002	30.439	30.374	30.614	1.2825	0.035614	0.00080127	NaN	2.4985	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540070	+		282	13795	152	153							0.05621155434073444
AFKVREFSI	9	Unmodified	_AFKVREFSI_					0	0	0		ENSG00000170606|ENST00000304858|HSPA4;ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000170606|ENST00000304858|HSPA4	ENSG00000170606|ENST00000304858|HSPA4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	548.3060790896416	2	548.811116	1095.60768	2.0895	0.0011467	-0.32581	-0.00017881	1.7637	0.00096794	548.8113920032112	58.711	0.32738	60.68	60.487	60.814	1.969					15	10	2	0	0	0	0.11333	1	24572	24572		8.5933	0	1	2065300			283	4155	153	154	378	378					0.0637002223129457
AFKVREFSI	9	Unmodified	_AFKVREFSI_					0	0	0		ENSG00000170606|ENST00000304858|HSPA4;ENSG00000164070|ENST00000296464|HSPA4L	ENSG00000170606|ENST00000304858|HSPA4	ENSG00000170606|ENST00000304858|HSPA4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	548.811116	1095.60768	1.7772	0.00097533	3.7015	0.0020314	5.4787	0.0030068	548.8136450602977	60.396	0.2239	60.396	60.317	60.541	0	-0.14166	0.0014532	NaN	8.5933	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	639840			284	4155	153	154							0.0637002223129457
AFLASLAII	9	Unmodified	_AFLASLAII_					0	0	0			REV__tr|A0A7D6ZYF3|A0A7D6ZYF3_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_02015PE=3SV=1	REV__tr|A0A7D6ZYF3|A0A7D6ZYF3_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_02015PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.5704833865166	1	918.565881	917.558604	3.2509	0.0029861	1.2315	0.0011312	4.4824	0.0041174	918.5667953599718	93.191	0.15961	94.468	94.42	94.58	1.277					6	4	2	0	0	0	0.15478	1	39237	39237		38.151	0	1	607200	+		285	15778	154	155	379	379					0.09652733942323266
AFMKGVFTF	9	Oxidation (M)	_AFM(Oxidation (M))KGVFTF_		AFM(1)KGVFTF		AFM(82)KGVFTF	0	0	1		ENST00000489739.1_1_9:139685858-139686514:+|nuORF;ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2655517458916	2	532.267696	1062.52084	0.92255	0.00049104	0.22201	0.00011817	1.1446	0.00060922	532.2676600240454	50.969	0.72782	52.363	52.109	52.836	1.3938					56	23	4	0	0	0	0.033504	3	21295	21295;21340;21395		81.89	49.585	1	11310000			286	5363	155	156	380;381;382	380		99			-0.007921003148112504
AFMKGVFTF	9	Oxidation (M)	_AFM(Oxidation (M))KGVFTF_		AFM(1)KGVFTF		AFM(92)KGVFTF	0	0	1		ENST00000489739.1_1_9:139685858-139686514:+|nuORF;ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2677490115166	2	532.267696	1062.52084	1.3287	0.00070725	-1.7496	-0.00093125	-0.42085	-0.000224	532.2669346713877	50.445	0.66188	52.42	52.126	52.788	1.9753					51	21	4	0	0	0	0.026836	3	21158	21057;21108;21158		92.491	58.389	1	10714000			287	5363	155	156	383;384;385	385		99			-0.007921003148112504
AFMKGVFTF	9	Unmodified	_AFMKGVFTF_					0	0	0		ENST00000489739.1_1_9:139685858-139686514:+|nuORF;ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2717773318291	2	524.270238	1046.52592	2.786	0.0014606	0.52607	0.0002758	3.312	0.0017364	524.2708674992775	64.136	0.96459	65.543	64.9	65.865	1.4071					105	30	6	0	0	0	0.026836	4	26963	26825;26871;26910;26963		92.491	64.005	1	67900000			288	5363	155	157	386;387;388;389	389					0.004522035478203179
AFMKGVFTF	9	Unmodified	_AFMKGVFTF_					0	0	0		ENST00000489739.1_1_9:139685858-139686514:+|nuORF;ENSG00000244187|ENST00000290079|TMEM141;ENST00000465017.5_1_9:139685862-139687281:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	ENST00000489739.1_1_9:139685858-139686514:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2724487185478	2	524.270238	1046.52592	2.7366	0.0014347	0.8767	0.00045963	3.6133	0.0018944	524.2711250466825	63.608	1.0915	65.552	64.782	65.874	1.9444					99	34	6	0	0	0	0.019432	5	26713	26599;26636;26674;26713;26758		99.799	63.672	1	94230000			289	5363	155	157	390;391;392;393;394	393					0.004522035478203179
AFPETLDLNL	10	Unmodified	_AFPETLDLNL_					0	0	0		nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D;ENST00000469599.6_1_Y:21877495-21878275:-|nuORF;ENST00000492117.1_1_Y:21877982-21883284:-|nuORF	nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7991821169853	2	566.797872	1131.58119	4.7816	0.0027102	-2.8241	-0.0016007	1.9574	0.0011095	566.7970217408935	89.992	0.37941	91.012	90.831	91.211	1.0199					24	11	3	0	0	0	0.75645	1	37914	37914		15.847	0	1	1705700			290	579	156	158	395	395					0.020662885492811256
AFPGGCHGW	9	Unmodified	_AFPGGCHGW_					0	0	0		ENST00000263382.7_1_19:14230532-14230643:-|nuORF	ENST00000263382.7_1_19:14230532-14230643:-|nuORF	ENST00000263382.7_1_19:14230532-14230643:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1357299685478	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.51	1	111.56	111.06	112.06	0.047043								0	0	0	0.42693	1	48080	48080		1.1933	0.735	1				291	5643	157	159	396	396					-0.08731839528513774
AFPGGCHGW	9	Unmodified	_AFPGGCHGW_					0	0	0		ENST00000263382.7_1_19:14230532-14230643:-|nuORF	ENST00000263382.7_1_19:14230532-14230643:-|nuORF	ENST00000263382.7_1_19:14230532-14230643:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1356384158134	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.52	1	111.68	111.18	112.18	0.16445								0	0	0	0.42693	1	48395	48395		1.1933	0.735	1				292	5643	157	159	397	397					-0.08731839528513774
AFRLSLKAKVS	11	Unmodified	_AFRLSLKAKVS_					0	0	0		ENST00000598010.5_1_19:4307947-4318394:+|nuORF;ENSG00000105255|ENST00000221856|FSD1	ENST00000598010.5_1_19:4307947-4318394:+|nuORF	ENST00000598010.5_1_19:4307947-4318394:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.3823119997978	2	610.379697	1218.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.318	1	87.562	87.062	88.062	0.24387								0	0	0	0.63775	1	36611	36611		2.7352	1.0826	1				293	1505	158	160	398	398					0.14421931110814512
AFRNLRKQRIE	11	Unmodified	_AFRNLRKQRIE_					0	0	0		nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;ENST00000471736.5_1_4:158142110-158255356:+|nuORF;GRIA2|p.L542Mfs*16|1|0.37|ENSG00000120251|chr4:157336524-157336530|CCTTTAG/-|frameshift_variant;nc|ENSG00000120251|P42262-4|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	478.3020812869072	3	477.616148	1429.82661	2.9195	0.0013944	2.0468	0.00097757	4.9663	0.002372	477.61709707753516	59.629	0.26716	61.598	61.495	61.763	1.969					14	8	2	0	0	0	0.14606	1	25070	25070		1.3296	0	1	2056700			294	2098	159	161	399	399					0.12889426522656322
AFSFSVTVL	9	Unmodified	_AFSFSVTVL_					0	0	0			REV__ENST00000216129.6_1_22:43563239-43563701:-|nuORF	REV__ENST00000216129.6_1_22:43563239-43563701:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7666198611259	2	485.765843	969.517133	2.8971	0.0014073	-1.68	-0.00081609	1.2171	0.00059123	485.7650611476621	82.551	0.42835	84.221	83.986	84.415	1.67					23	13	2	0	0	0	0.11478	2	34637	34588;34637		44.407	6.2558	1	1928400	+		295	12066	160	162	400;401	401					0.031155531829995198
AFSFSVTVL	9	Unmodified	_AFSFSVTVL_					0	0	0			REV__ENST00000216129.6_1_22:43563239-43563701:-|nuORF	REV__ENST00000216129.6_1_22:43563239-43563701:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	485.765843	969.517133	2.8971	0.0014073	-1.68	-0.00081609	1.2171	0.00059123	485.7650611476621	82.551	0.42835	84.221	83.986	84.415	1.67	0.031925	0.0005181	NaN	44.407	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1928400	+		296	12066	160	162							0.031155531829995198
AFSLKLKKMK	10	Unmodified	_AFSLKLKKMK_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.5860778689384	3	398.586138	1192.73659	0.080825	3.2216E-05	-2.0468	-0.00081581	-1.9659	-0.00078359	398.58560658779015	32.84	0.49483	34.119	33.824	34.319	1.2782					38	17	3	0	0	0	0.8974	1	13746	13746		1.7423	0	1	4555000			297	16345	161	163	402	402					0.14792660869829888
AFSYITGVL	9	Unmodified	_AFSYITGVL_					0	0	0		ENST00000366956.9_1_1:214530048-214530297:-|nuORF	ENST00000366956.9_1_1:214530048-214530297:-|nuORF	ENST00000366956.9_1_1:214530048-214530297:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7661010622978	2	485.765843	969.517133	2.8042	0.0013622	-2.8138	-0.0013668	-0.0095737	-4.6506E-06	485.7646019829901	82.944	0.55713	84.157	83.983	84.54	1.2125					27	17	2	0	0	0	0.22519	1	34864	34864		30.225	0	1	2195600			298	6054	162	164	403	403					0.031155531829995198
AFVGRLVSTL	10	Unmodified	_AFVGRLVSTL_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8194457888603	2	531.818941	1061.62333	3.0439	0.0016188	-4.0029	-0.0021288	-0.95899	-0.00051001	531.8163573787486	70.528	0.69952	71.882	71.584	72.284	1.3536					34	21	2	0	0	0	0.6819	1	29621	29621		19.257	4.6753	1	1767600			299	5069	163	165	404	404					0.09498308748334239
AFYFYSKY	8	Unmodified	_AFYFYSKY_					0	0	0		tr|A0A553SRG8|A0A553SRG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00880PE=4SV=1	tr|A0A553SRG8|A0A553SRG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00880PE=4SV=1	tr|A0A553SRG8|A0A553SRG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00880PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537414431572	3	363.507771	1087.50148	1.0709	0.0003893	1.1416	0.00041497	2.2125	0.00080427	363.5081003989187	83.318	0.41119	84.506	84.23	84.642	1.1879					22	12	3	0	0	0	2.3239	1	34998	34998		0.45834	0	1	456540			300	16556	164	166	405	405					-0.038767333340501864
AFYKSKLKT	9	Unmodified	_AFYKSKLKT_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2;ENST00000478861.1_1_20:62190259-62192809:-|nuORF	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2528564333916	3	362.54997	1084.62808	-0.99409	-0.00036041	-2.1088	-0.00076456	-3.1029	-0.001125	362.549219105096	15.121	0.2842	15.891	15.705	15.989	0.76937					14	8	2	0	0	0	0.11938	1	6257	6257		1.1933	0.735	1	575360			301	2443	165	167	406	406					0.08915192891095103
AFYKSKLKT	9	Unmodified	_AFYKSKLKT_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2;ENST00000478861.1_1_20:62190259-62192809:-|nuORF	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	362.54997	1084.62808	0.11096	4.0227E-05	-3.5741	-0.0012958	-3.4632	-0.0012556	362.5485448654249	15.713	0.34652	15.843	15.555	15.902	0.13022	-0.035741	-0.00044913	NaN	1.1933	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326380			302	2443	165	167							0.08915192891095103
AFYLAEFFV	9	Unmodified	_AFYLAEFFV_					0	0	0		ENST00000520609.5_1_8:63930016-63936547:-|nuORF;ENSG00000137563|ENST00000260118|GGH	ENST00000520609.5_1_8:63930016-63936547:-|nuORF	ENST00000520609.5_1_8:63930016-63936547:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2847778201103	2	553.781493	1105.54843	1.934	0.001071	-0.95894	-0.00053104	0.97505	0.00053997	554.2823143943548	66.129	0.29967	67.517	67.389	67.689	1.3887					12	9	2	0	0	0	0.51832	1	27749	27749		14.582	2.0501	1	876100			303	2776	166	168	407	407					-0.00011873782909788133
AGAANCDV	8	Unmodified	_AGAANCDV_					0	0	0			REV__nc|ENSG00000140945|P55290-5|CDH13	REV__nc|ENSG00000140945|P55290-5|CDH13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	720.3030273318291	1	720.298115	719.290839	2.7075	0.0019502	4.1375	0.0029802	6.845	0.0049304	720.301386339841	99.235	0.18387	99.315	99.176	99.36	0.080376					9	5	2	0	0	0	0.89008	1	41542	41542		2.5775	0	1	1172900	+		304	10135	167	169	408	408					-0.08003513927735639
AGAILVLHLL	10	Unmodified	_AGAILVLHLL_					0	0	0			REV__tr|A0A553SFF0|A0A553SFF0_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08785PE=3SV=1	REV__tr|A0A553SFF0|A0A553SFF0_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08785PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.7909118533134	2	510.334227	1018.6539	3.5084	0.0017905	-1.9593	-0.00099992	1.5491	0.00079056	510.3331947032076	60.583	1.0196	62.548	62.167	63.187	1.9653					42	32	2	0	0	0	0.12288	1	25370	25370		32.117	7.4431	1	540850	+		305	14705	168	170	409	409					0.1453208713337517
AGALLQYFI	9	Unmodified	_AGALLQYFI_					0	0	0			REV__ENSG00000166866|ENST00000300119|MYO1A	REV__ENSG00000166866|ENST00000300119|MYO1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	498.8284179568291	2	498.28166	994.548768	3.4177	0.001703	-2.6139	-0.0013025	0.80377	0.00040051	498.2793022417208	82.51	0.19241	83.723	83.634	83.826	1.2125					8	5	2	0	0	0	0.099861	1	34638	34638		14.582	0	1	519330	+		306	10845	169	171	410	410					0.05127545936932165
AGARRPRAP	9	Unmodified	_AGARRPRAP_					0	0	0			REV__ENST00000451091.2_1_1:40041668-40042359:-|nuORF	REV__ENST00000451091.2_1_1:40041668-40042359:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1995422244072	2	476.283392	950.552231	2.379	0.0011331	-1.3124	-0.00062509	1.0666	0.00050798	476.2817971217917	44.258	0.44252	46.202	45.957	46.399	1.9438					23	13	2	0	0	0	0.11787	1	18599	18599		2.3027	0	1	2333600	+		307	13134	170	172	411	411					0.07497653554173667
AGDGDGDEE	9	Unmodified	_AGDGDGDEE_					0	0	0			REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	864.2891723513603	1	864.285361	863.278085	2.789	0.0024105	3.5331	0.0030536	6.3222	0.0054641	864.2878309871911	98.723	0.16777	98.803	98.707	98.875	0.080376					7	5	2	0	0	0	0.83753	1	41336	41336		1.8442	1.0506	1	7319600	+		308	13034	171	173	412	412					-0.15902298576929752
AGDGDGDEE	9	Unmodified	_AGDGDGDEE_					0	0	0			REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	864.285361	863.278085	1.2548	0.0010845	2.987	0.0025816	4.2418	0.0036661	864.2876422025707	98.777	0.11057	98.777	98.737	98.848	0	-0.01295	-0.00017349	NaN	1.8442	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12514000	+		309	13034	171	173							-0.15902298576929752
AGDGDGDEE	9	Unmodified	_AGDGDGDEE_					0	0	0			REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	REV__ENST00000432293.2_1_7:35922096-35937941:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	864.285361	863.278085	2.789	0.0024105	3.5331	0.0030536	6.3222	0.0054641	864.2878309871911	98.723	0.16777	98.803	98.707	98.875	0.080376	0.01295	0.00029854	NaN	1.8442	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7319600	+		310	13034	171	173							-0.15902298576929752
AGDTECTY	8	Unmodified	_AGDTECTY_					0	0	0			REV__nc|ENSG00000135503|P36896-2|ACVR1B	REV__nc|ENSG00000135503|P36896-2|ACVR1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3151122927666	1	859.313825	858.306548	3.3827	0.0029068	-0.63814	-0.00054836	2.7446	0.0023585	859.3133495368355	98.514	0.19806	98.742	98.642	98.84	0.22776					10	6	2	0	0	0	0.88504	1	41511	41511		5.7604	0	1	45318000	+		311	9943	172	174	413	413					-0.12827272201354845
AGDTECTY	8	Unmodified	_AGDTECTY_					0	0	0			REV__nc|ENSG00000135503|P36896-2|ACVR1B	REV__nc|ENSG00000135503|P36896-2|ACVR1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3156005740166	1	859.313825	858.306548	3.1124	0.0026745	-0.0046286	-3.9774E-06	3.1078	0.0026706	859.3136036307176	98.437	0.20045	98.694	98.565	98.765	0.25636					15	6	3	0	0	0	0.88504	1	41404	41404		5.7604	0	1	48339000	+		312	9943	172	174	414	414					-0.12827272201354845
AGEIQPNRK	9	Unmodified	_AGEIQPNRK_					0	0	0		tr|A0A553SII8|A0A553SII8_NIACIToxinYqcGC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14950PE=4SV=1	tr|A0A553SII8|A0A553SII8_NIACIToxinYqcGC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14950PE=4SV=1	tr|A0A553SII8|A0A553SII8_NIACIToxinYqcGC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14950PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7809326052666	2	506.780348	1011.54614	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9026	1	9.9806	9.4806	10.481	0.077971								0	0	0	0.36184	1	4104	4104		12.532	3.1484	1				313	16202	173	175	415	415					0.04083090531992184
AGEPEPEWDNE	11	Unmodified	_AGEPEPEWDNE_					0	0	0		ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1;ENSG00000070961|ENST00000428670|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-1|ATP2B1	ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant	ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.8392516970634	3	424.838685	1271.49423	-0.095963	-4.0769E-05	1.9957	0.00084784	1.8997	0.00080707	424.83962381694016	17.884	0.46341	17.884	17.686	18.149	0					34	14	3	0	0	0	1.0357	1	7400	7400		0.50596	0	1	989140			314	89	174	176	416	416					-0.13066162463064757
AGEQSSHEVQ	10	Unmodified	_AGEQSSHEVQ_					0	0	0		ENST00000400337.6_1_21:46933073-46933574:+|nuORF	ENST00000400337.6_1_21:46933073-46933574:+|nuORF	ENST00000400337.6_1_21:46933073-46933574:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.2980224490166	2	536.238709	1070.46287	1.6425	0.00088076	-0.35362	-0.00018963	1.2889	0.00069113	536.2388154092054	39.148	0.15623	40.984	40.88	41.037	1.8366					6	4	2	0	0	0	0.12425	1	16385	16385		19.257	5.7491	1	386390			315	6344	175	177	417	417					-0.06954690706515976
AGEYMSCFEAQ	11	Unmodified	_AGEYMSCFEAQ_					0	0	0		nc|ENSG00000173567|Q8IZF5-3|ADGRF3;ENSG00000173567|ENST00000651242|ADGRF3;nc|ENSG00000173567|Q8IZF5|ADGRF3	nc|ENSG00000173567|Q8IZF5-3|ADGRF3	nc|ENSG00000173567|Q8IZF5-3|ADGRF3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1235.675219714642	1	1235.47074	1234.46346	1.4933	0.001845	-1.374	-0.0016975	0.11938	0.00014749	1235.469411030183	32.231	0.1843	32.231	32.072	32.257	0					7	5	2	0	0	0	0.14606	1	13463	13463		3.2813	0	1	488350			316	4287	176	178	418	418					-0.14439355373338003
AGFAGDDAPR	10	Unmodified	_AGFAGDDAPR_					0	0	0		ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI	ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.7272216677666	2	488.727781	975.441008	0.15183	7.4203E-05	-0.62173	-0.00030386	-0.46991	-0.00022966	488.7274466898181	14.568	0.24792	15.337	15.209	15.457	0.76937					22	8	4	0	0	0	0.13797	2	6033	6033;6082		57.249	30.365	1	15798000			317	937;6831	177	179	419;420	419					-0.04769450664434771
AGFAGDDAPR	10	Unmodified	_AGFAGDDAPR_					0	0	0		ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENST00000477812.1_1_7:5569027-5569288:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENSG00000196604|ENST00000409914|POTEF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI	ENST00000482085.1_1_10:90708534-90712518:-|nuORF;ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7270690798759	2	488.727781	975.441008	0.23282	0.00011379	-1.3526	-0.00066107	-1.1198	-0.00054728	488.72710904463196	14.487	0.2049	15.384	15.297	15.502	0.89664					29	9	4	0	0	0	0.045213	2	5998	5998;6053		83.429	41.334	1	15153000			318	937;6831	177	179	421;422	421					-0.04769450664434771
AGFCAETE	8	Unmodified	_AGFCAETE_					0	0	0			REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	827.3254272341728	1	827.323996	826.316719	2.8525	0.00236	-0.29458	-0.00024371	2.5579	0.0021163	827.32382635203	101.98	0.11992	102.15	102.08	102.2	0.17032					6	3	2	0	0	0	0.88504	1	42914	42914		5.7604	2.8712	1	19443000	+		319	13875	178	180	423	423					-0.10338664476114445
AGFCAETE	8	Unmodified	_AGFCAETE_					0	0	0			REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	827.323996	826.316719	1.2429	0.0010283	0.12388	0.00010249	1.3668	0.0011308	827.3237965687929	102.11	0.16451	102.11	102.01	102.18	0	-0.012474	0.00044037	NaN	5.7604	14	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33887000	+		320	13875	178	180							-0.10338664476114445
AGFCAETE	8	Unmodified	_AGFCAETE_					0	0	0			REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	827.323996	826.316719	2.8525	0.00236	-0.29458	-0.00024371	2.5579	0.0021163	827.32382635203	101.98	0.11992	102.15	102.08	102.2	0.17032	0.024	9.4163E-05	NaN	5.7604	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19443000	+		321	13875	178	180							-0.10338664476114445
AGFDILLQI	9	Unmodified	_AGFDILLQI_					0	0	0			REV__nc|ENSG00000198881|Q8WXK4|ASB12	REV__nc|ENSG00000198881|Q8WXK4|ASB12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2898437380791	2	495.286943	988.559333	4.134	0.0020475	2.3131	0.0011456	6.447	0.0031931	495.2879793843025	94.695	0.47671	95.436	95.136	95.613	0.74124					22	14	2	0	0	0	0.34572	1	39838	39838		23.148	0	1	1105600	+		322	11752	179	181	424	424					0.06459528591392427
AGFDSASARWF	11	Unmodified	_AGFDSASARWF_					0	0	0		ENSG00000133124|ENST00000372129|IRS4;nc|ENSG00000133124|O14654|IRS4	ENSG00000133124|ENST00000372129|IRS4	ENSG00000133124|ENST00000372129|IRS4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.2131225466728	2	607.783087	1213.55162	2.3043	0.0014005	4.1749	0.0025374	6.4792	0.0039379	607.7856562249646	64.362	0.25309	66.29	66.202	66.455	1.928					12	7	2	0	0	0	0.14606	1	27047	27047		6.2058	5.7474	1	562610			323	2562	180	182	425	425					-0.04661230676197192
AGFELFAF	8	Unmodified	_AGFELFAF_					0	0	0		HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|74|3|sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|74|3|sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|74|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2242614626884	2	451.226354	900.438155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.159	1	31.441	30.941	31.941	1.2825								0	0	0	1.0178	1	12656	12656		11.114	0.93107	1				324	7646	181	183	426	426					-0.016046740512933866
AGFMSYVTG	9	Unmodified	_AGFMSYVTG_					0	0	0			REV__tr|A0A553SJP8|A0A553SJP8_NIACIFAD-bindingoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_17315PE=4SV=1	REV__tr|A0A553SJP8|A0A553SJP8_NIACIFAD-bindingoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_17315PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1336547732353	3	311.477594	931.410954	2.0126	0.00062688	3.6296	0.0011305	5.6422	0.0017574	311.47875538698474	82.661	0.41261	83.874	83.634	84.046	1.2125					14	12	2	0	0	0	0.11901	1	34712	34712		2.7352	1.6637	1	581560	+		325	14916	182	184	427	427					-0.057495256539596085
AGFTATAASPF	11	Unmodified	_AGFTATAASPF_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7540771365166	2	520.756007	1039.49746	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.362	1	79.113	78.613	79.613	1.7514								0	0	0	0.63772	1	32442	32442		9.3831	0.78985	1				326	5456	183	185	428	428					-0.020708228277726448
AGFVVASFV	9	Unmodified	_AGFVVASFV_					0	0	0			REV__ENSG00000085563|ENST00000622132|ABCB1	REV__ENSG00000085563|ENST00000622132|ABCB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.7477905154228	2	448.747453	895.480354	3.5598	0.0015975	-2.8933	-0.0012984	0.6665	0.00029909	448.74594942415894	82.207	0.40961	83.877	83.639	84.049	1.67					22	12	2	0	0	0	0.069258	1	34470	34470		60.39	15.983	1	2636600	+		327	8853	184	186	429	429					0.028433013570975163
AGFVVASFV	9	Unmodified	_AGFVVASFV_					0	0	0			REV__ENSG00000085563|ENST00000622132|ABCB1	REV__ENSG00000085563|ENST00000622132|ABCB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	448.747453	895.480354	3.5598	0.0015975	-2.8933	-0.0012984	0.6665	0.00029909	448.74594942415894	82.207	0.40961	83.877	83.639	84.049	1.67	0.0014138	-0.00015637	NaN	60.39	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2636600	+		328	8853	184	186							0.028433013570975163
AGGCCCFE	8	Unmodified	_AGGCCCFE_					0	0	0			REV__ENST00000345046.10_1_X:152988698-152989941:-|nuORF	REV__ENST00000345046.10_1_X:152988698-152989941:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	395.1219360232353	2	395.12186	788.229166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.088	1	87.635	87.135	88.135	1.547								0	0	0	1.0178	1	36259	36259		0.79363	0.79363	1		+		329	12522	185	187	430	430					-0.17341904942884412
AGGDEENK	8	Unmodified	_AGGDEENK_					0	0	0			REV__nc|ENSG00000150527|Q96PC5-2|MIA2	REV__nc|ENSG00000150527|Q96PC5-2|MIA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	410.1728698611259	2	410.177589	818.340626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.401	1	12.163	11.663	12.663	0.76165								0	0	0	1.0178	1	4735	4735		10.183	0.83596	1		+		330	10381	186	188	431	431					-0.07581107718090152
AGGHGGKA	8	Unmodified	_AGGHGGKA_					0	0	0			REV__ENSG00000156885|ENST00000287490|COX6A2	REV__ENSG00000156885|ENST00000287490|COX6A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	654.3833495974541	1	654.331799	653.324522	2.9136	0.0019064	-1.4735	-0.00096419	1.44	0.00094225	654.3308285899507	106.38	0.26663	106.54	106.37	106.64	0.15781					21	12	2	0	0	0	2.3239	1	45606	45606		0.69038	0	1	4900800	+		331	10525	187	189	432	432					-0.016007243736794408
AGGHWGPV	8	Unmodified	_AGGHWGPV_					0	0	0		ENST00000452533.6_1_12:32832232-32832310:+|nuORF	ENST00000452533.6_1_12:32832232-32832310:+|nuORF	ENST00000452533.6_1_12:32832232-32832310:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	390.6920654177666	2	390.693013	779.371472	-1.0477	-0.00040934	-1.2658	-0.00049453	-2.3135	-0.00090387	390.6923300497203	18.377	1.2668	18.377	17.81	19.077	0					102	43	3	0	0	0	0.88958	1	7658	7658		2.8892	2.8892	1	10037000			332	6617	188	190	433	433					-0.027038648225243378
AGGRIHVF	8	Unmodified	_AGGRIHVF_					0	0	0		ENST00000392688.6_1_1:152286136-152286469:+|nuORF	ENST00000392688.6_1_1:152286136-152286469:+|nuORF	ENST00000392688.6_1_1:152286136-152286469:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	428.7449218630791	2	428.743037	855.471521	2.2557	0.00096711	2.3394	0.001003	4.5951	0.0019701	428.74387203878103	54.001	0.53841	54.322	54.128	54.667	0.32088					43	16	3	0	0	0	0.88587	1	22601	22601		5.2307	2.6532	1	2954700			333	6260	189	191	434	434					0.03800372511284422
AGHCALTM	8	Unmodified	_AGHCALTM_					0	0	0		ENSG00000175567|ENST00000663595|UCP2	ENSG00000175567|ENST00000663595|UCP2	ENSG00000175567|ENST00000663595|UCP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1805908083916	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.614	1	64.941	64.441	65.441	0.32689								0	0	0	1.0178	1	27064	27064		0.79363	0	1				334	4379	190	192	435	435					-0.0625000401178113
AGHLEIGTV	9	Unmodified	_AGHLEIGTV_					0	0	0		ENST00000398988.7_2_17:25951918-25952683:+|nuORF	ENST00000398988.7_2_17:25951918-25952683:+|nuORF	ENST00000398988.7_2_17:25951918-25952683:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.7480346560478	2	448.745442	895.476331	3.4601	0.0015527	1.9079	0.00085614	5.3679	0.0024088	448.7462061837698	82.661	0.44482	83.874	83.634	84.079	1.2125					24	13	2	0	0	0	0.1735	1	34718	34718		36.044	0	1	4612900			335	6330	191	193	436	436					0.024412118634018043
AGIFVRLEFKL	11	Unmodified	_AGIFVRLEFKL_					0	0	0		ENST00000478771.2_1_7:150035716-150037350:-|nuORF;ENSG00000106538|ENST00000223271|RARRES2	ENST00000478771.2_1_7:150035716-150037350:-|nuORF	ENST00000478771.2_1_7:150035716-150037350:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	646.8882324099541	2	646.889898	1291.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.112	1	14.225	13.725	14.725	0.11295								0	0	0	0.63775	1	5855	5855		1.4819	0.15237	1				336	1571	192	194	437	437					0.13103101770639114
AGIGIMKSTAL	11	Unmodified	_AGIGIMKSTAL_					0	0	0			REV__ENST00000404404.5_1_7:5037104-5037299:+|nuORF	REV__ENST00000404404.5_1_7:5037104-5037299:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3040649294853	2	531.30481	1060.59507	1.7029	0.00090475	-3.2115	-0.0017063	-1.5086	-0.00080152	531.3026663515443	71.733	0.56246	73.074	72.748	73.31	1.3415					43	17	3	0	0	0	0.78502	1	30151	30151		15.847	2.3393	1	9913700	+		337	12893	193	195	438	438					0.06719242776716783
AGIGNWWRVL	10	Unmodified	_AGIGNWWRVL_					0	0	0			REV__ENSG00000164976|ENST00000297625|MYORG	REV__ENSG00000164976|ENST00000297625|MYORG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3249999880791	2	586.322183	1170.62981	3.0035	0.001761	-0.47219	-0.00027686	2.5313	0.0014842	586.3228703164224	80.956	0.27731	82.189	82.07	82.348	1.2332					13	8	2	0	0	0	0.846	1	34045	34045		7.2892	1.0834	1	719310	+		338	10759	194	196	439	439					0.05132246699713505
AGIIVPIHMI	10	Unmodified	_AGIIVPIHMI_					0	0	0			REV__tr|A0A7D6ZRZ0|A0A7D6ZRZ0_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_05705PE=4SV=1	REV__tr|A0A7D6ZRZ0|A0A7D6ZRZ0_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_05705PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	532.7680541872978	2	532.320263	1062.62597	2.515	0.0013388	-2.0021	-0.0010657	0.51296	0.00027306	532.3194958770745	65.73	0.52087	67.128	66.849	67.37	1.3989					24	16	2	0	0	0	0.12513	1	27456	27456		1.8442	0	1	1779900	+		339	15698	195	197	440	440					0.09716440881607014
AGKKFRKKKK	10	Unmodified	_AGKKFRKKKK_					0	0	0		ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.4143554568291	2	609.911499	1217.80845	3.2191	0.0019633	-4.382	-0.0026726	-1.163	-0.0007093	610.4100271647656	101.6	0.15757	101.79	101.68	101.84	0.19076					7	4	2	0	0	0	0.89803	1	42711	42711		0.45834	0.057624	1	1219400			340	822	196	198	441	441					0.20825336338589295
AGLATGAGFI	10	Unmodified	_AGLATGAGFI_					0	0	0		tr|A0A7D6ZYL6|A0A7D6ZYL6_9CLOTDUF4956domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02765PE=4SV=1	tr|A0A7D6ZYL6|A0A7D6ZYL6_9CLOTDUF4956domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02765PE=4SV=1	tr|A0A7D6ZYL6|A0A7D6ZYL6_9CLOTDUF4956domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	877.4783203005791	1	877.477794	876.470518	1.5882	0.0013936	0.034959	3.0676E-05	1.6232	0.0014243	877.4776656664529	68.123	0.31523	68.123	67.98	68.296	0					16	9	2	0	0	0	0.84024	1	28420	28420		7.9102	0	1	1112200			341	17198	197	199	442	442					0.027341133517211347
AGLERKQGIHI	11	Unmodified	_AGLERKQGIHI_					0	0	0			REV__ENSG00000156282|ENST00000286808|CLDN17	REV__ENSG00000156282|ENST00000286808|CLDN17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3586303591728	2	611.356754	1220.69895	2.6943	0.0016472	-0.37319	-0.00022815	2.3211	0.001419	611.3562611766833	75.754	1.6055	77.521	76.716	78.321	1.7672					95	51	2	0	0	0	1.0031	1	31959	31959		3.5965	0	1	3638600	+		342	10510	198	200	443	443					0.09743285928607293
AGLETGKQII	10	Unmodified	_AGLETGKQII_					0	0	0			REV__tr|A0A553SKN8|A0A553SKN8_NIACIRibosomalRNAsmallsubunitmethyltransferaseEOS=NialliacirculansOX=1397GN=CEQ21_18960PE=3SV=1	REV__tr|A0A553SKN8|A0A553SKN8_NIACIRibosomalRNAsmallsubunitmethyltransferaseEOS=NialliacirculansOX=1397GN=CEQ21_18960PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3024780154228	2	515.300581	1028.58661	3.2275	0.0016631	3.3444	0.0017234	6.5719	0.0033865	515.3025506703588	72.556	0.46146	73.886	73.702	74.164	1.3298					28	14	3	0	0	0	0.75645	1	30431	30431		15.847	1.0089	1	1363400	+		343	14961	199	201	444	444					0.07346012131779389
AGLLGARLPD	10	Unmodified	_AGLLGARLPD_					0	0	0		DISP2|p.W217Gfs*22|1|0.08|ENSG00000140323|chr15:40364882-40364882|C/-|frameshift_variant;ENSG00000140323|ENST00000267889|DISP2	DISP2|p.W217Gfs*22|1|0.08|ENSG00000140323|chr15:40364882-40364882|C/-|frameshift_variant	DISP2|p.W217Gfs*22|1|0.08|ENSG00000140323|chr15:40364882-40364882|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5740234255791	1	982.568006	981.56073	3.7876	0.0037216	-1.6581	-0.0016292	2.1295	0.0020924	982.5687435438141	80.905	1.2538	82.139	81.742	82.996	1.2332					58	40	2	0	0	0	0.73251	2	34093	34093;34149		16.942	4.4107	1	2222100			344	409	200	202	445;446	445					0.06921162680123416
AGLNFACAQL	10	Unmodified	_AGLNFACAQL_					0	0	0			REV__ENSG00000187862|ENST00000368236|TTC24	REV__ENSG00000187862|ENST00000368236|TTC24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2565185427666	2	504.252577	1006.4906	4.5713	0.0023051	1.1257	0.00056761	5.697	0.0028727	504.2527915465161	89.121	0.38055	90.525	90.264	90.645	1.4045					43	11	5	0	0	0	0.77604	1	37496	37496		14.838	0.25658	1	3969600	+		345	11556	201	203	447	447					-0.012384589800035428
AGLPQQLAPVL	11	Unmodified	_AGLPQQLAPVL_					0	0	0			REV__ENST00000409148.1_1_2:80530600-80531307:-|nuORF	REV__ENST00000409148.1_1_2:80530600-80531307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8328735232353	2	553.832049	1105.64954	2.1408	0.0011856	-2.401	-0.0013298	-0.26025	-0.00014414	553.8306741234597	87.589	0.41185	87.589	87.378	87.79	0					36	13	4	0	0	0	0.95983	1	36657	36657		6.2058	2.6093	1	6180900	+		346	12911	202	204	448	448					0.10094577919812764
AGLQFPVGR	9	Unmodified	_AGLQFPVGR_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;nc|ENSG00000105968|Q71UI9-5|H2AZ2;nc|ENSG00000105968|Q71UI9-2|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF	ENSG00000188486|ENST00000530167|H2AX;nc|ENSG00000105968|Q71UI9-2|H2AZ2	ENSG00000188486|ENST00000530167|H2AX	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7691528201103	2	472.769252	943.52395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.991	1	38.267	37.767	38.767	1.2762								0	0	0	0.026243	1	15527	15527		74.929	22.661	1				347	4864;1550	203	205	449	449					0.04992910854230104
AGLQFPVGR	9	Unmodified	_AGLQFPVGR_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;nc|ENSG00000105968|Q71UI9-5|H2AZ2;nc|ENSG00000105968|Q71UI9-2|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF	ENSG00000188486|ENST00000530167|H2AX;nc|ENSG00000105968|Q71UI9-2|H2AZ2	ENSG00000188486|ENST00000530167|H2AX	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7683898806572	2	472.769252	943.52395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.092	1	38.376	37.876	38.876	1.284								0	0	0	0.025821	1	15570	15570		85.272	33.004	1				348	4864;1550	203	205	450	450					0.04992910854230104
AGLQFPVGR	9	Unmodified	_AGLQFPVGR_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;nc|ENSG00000105968|Q71UI9-5|H2AZ2;nc|ENSG00000105968|Q71UI9-2|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF	ENSG00000188486|ENST00000530167|H2AX;nc|ENSG00000105968|Q71UI9-2|H2AZ2	ENSG00000188486|ENST00000530167|H2AX	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7675353884697	2	472.769252	943.52395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.416	1	38.233	37.733	38.733	1.8176								0	0	0	0.00033131	1	15274	15274		108	36.863	1				349	4864;1550	203	205	451	451					0.04992910854230104
AGLQGWARQL	10	Unmodified	_AGLQGWARQL_					0	0	0			REV__ENST00000485732.5_1_9:139749436-139750950:+|nuORF	REV__ENST00000485732.5_1_9:139749436-139750950:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2188598513603	2	550.30399	1098.59343	1.6221	0.00089263	1.382	0.00076049	3.004	0.0016531	550.304636972996	58.719	0.25634	58.719	58.59	58.846	0					12	7	2	0	0	0	0.12539	1	24534	24534		1.8442	0.36234	1	764240	+		350	11229	204	206	452	452					0.04807369802983885
AGLSLKLAEV	10	Unmodified	_AGLSLKLAEV_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8065673708916	2	500.8055	999.596446	2.326	0.0011649	-0.19478	-9.7546E-05	2.1312	0.0010673	500.8061876462627	47.475	0.17372	47.805	47.696	47.87	0.33034					7	5	2	0	0	0	0.85124	1	19934	19934		6.7232	0.51738	1	289790			351	4781	205	207	453	453					0.09663200137129024
AGLSLKLAEV	10	Unmodified	_AGLSLKLAEV_					0	0	0		ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	ENSG00000186212|ENST00000334306|SOWAHB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	500.8055	999.596446	1.9006	0.00095185	1.6564	0.00082953	3.557	0.0017814	500.8062757208297	47.932	0.22171	47.932	47.839	48.061	0	0.063462	0.00062341	NaN	6.7232	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266220			352	4781	205	207							0.09663200137129024
AGLWLFAYLQ	10	Unmodified	_AGLWLFAYLQ_					0	0	0			REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3245117068291	2	591.321317	1180.62808	0.25824	0.0001527	3.4855	0.002061	3.7437	0.0022137	591.3233729173796	15.306	0.20243	16.202	16.082	16.284	0.89664					13	6	3	0	0	0	0.80568	1	6345	6345		11.64	0.81637	1	499690	+		353	14588	206	208	454	454					0.044991928910803836
AGLWLFAYLQ	10	Unmodified	_AGLWLFAYLQ_					0	0	0			REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	591.321317	1180.62808	0.24171	0.00014293	3.2595	0.0019274	3.5013	0.0020704	591.8244364436471	15.405	0.15568	16.232	16.138	16.293	0.82643	0.014663	-0.00022639	NaN	11.64	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456430	+		354	14588	206	208							0.044991928910803836
AGLWLFAYLQ	10	Unmodified	_AGLWLFAYLQ_					0	0	0			REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	REV__OR2C1|p.V103A|1|0.06|ENSG00000168158|chr16:3356248-3356248|T/C|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	591.321317	1180.62808	0.25824	0.0001527	3.4855	0.002061	3.7437	0.0022137	591.3233729173796	15.306	0.20243	16.202	16.082	16.284	0.89664	-0.014663	4.0822E-05	NaN	11.64	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	499690	+		355	14588	206	208							0.044991928910803836
AGMVMQQQVL	10	Unmodified	_AGMVMQQQVL_					0	0	0			REV__nc|ENSG00000173406|O75553-3|DAB1	REV__nc|ENSG00000173406|O75553-3|DAB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7782470583916	2	552.780644	1103.54674	2.0064	0.0011091	-4.173	-0.0023067	-2.1666	-0.0011977	552.7784714216323	47.026	0.34786	48.409	48.251	48.599	1.3825					15	10	2	0	0	0	0.75645	1	19707	19707		15.847	3.6065	1	489350	+		356	11096	207	209	455	455					-0.000895741348131196
AGNIFKELLV	10	Unmodified	_AGNIFKELLV_					0	0	0			REV__ENSG00000168288|ENST00000303319|MMADHC	REV__ENSG00000168288|ENST00000303319|MMADHC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3268920779228	2	552.326599	1102.63865	1.4908	0.00082343	-0.52097	-0.00028775	0.96987	0.00053569	552.3260779595439	50.717	0.33234	52.111	51.894	52.226	1.3938					27	10	3	0	0	0	0.52861	1	21189	21189		26.268	0.86883	1	5175300	+		357	10903	208	210	456	456					0.09143175545523263
AGNIFKELLV	10	Unmodified	_AGNIFKELLV_					0	0	0			REV__ENSG00000168288|ENST00000303319|MMADHC	REV__ENSG00000168288|ENST00000303319|MMADHC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3286010622978	2	552.326599	1102.63865	1.539	0.00085005	0.12414	6.8564E-05	1.6632	0.00091861	552.3264276949577	50.127	0.36693	52.104	51.883	52.25	1.9772					26	11	3	0	0	0	0.40874	1	20956	20956		32.786	1.5173	1	4678400	+		358	10903	208	210	457	457					0.09143175545523263
AGNILNLFYK	10	Unmodified	_AGNILNLFYK_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8253051638603	2	576.824224	1151.63389	2.5006	0.0014424	-0.2203	-0.00012707	2.2803	0.0013153	576.8242688346253	76.766	0.43757	78.06	77.825	78.262	1.2938					39	13	4	0	0	0	0.65574	1	32255	32255		20.454	0	1	9553700	+		359	11898	209	211	458	458					0.06414291402734307
AGPCHPWS	8	Unmodified	_AGPCHPWS_					0	0	0			REV__nc|ENSG00000142632|Q8IW93-2|ARHGEF19	REV__nc|ENSG00000142632|Q8IW93-2|ARHGEF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3607055544853	1	854.361384	853.354108	3.1	0.0026485	-1.9072	-0.0016294	1.1928	0.0010191	854.3597455274606	94.781	0.39859	95.969	95.773	96.171	1.1887					23	13	2	0	0	0	0.88504	2	39831	39831;39931		5.7604	2.8712	1	6024600	+		360	10186	210	212	459;460	459					-0.0784352841984628
AGPEYYDNNYF	11	Unmodified	_AGPEYYDNNYF_					0	0	0			REV__ZAN|p.C1460Pfs*41|1|0.07|ENSG00000146839|chr7:100765461-100765462|-/CCAGCACTTTGGGAGTCCGAGGCAGG|frameshift_variant	REV__ZAN|p.C1460Pfs*41|1|0.07|ENSG00000146839|chr7:100765461-100765462|-/CCAGCACTTTGGGAGTCCGAGGCAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	676.6600219607353	2	676.775125	1351.5357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.803	1	97.088	96.588	97.588	0.28442								0	0	0	0.63775	1	40732	40732		3.5965	0.60125	1		+		361	10315	211	213	461	461					-0.12600981703758407
AGPGDGEG	8	Unmodified	_AGPGDGEG_					0	0	0		ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.2677490115166	1	659.26311	658.255833	3.5235	0.0023229	1.3901	0.00091643	4.9135	0.0032393	659.2647454528822	97.589	0.23529	97.817	97.716	97.951	0.22776					21	7	5	0	0	0	0.89176	1	41096	41096		0.79363	0	1	668380000			362	5492	212	214	462	462					-0.08696433464024267
AGPGDGEG	8	Unmodified	_AGPGDGEG_					0	0	0		ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.2665893435478	1	659.26311	658.255833	3.1582	0.0020821	0.88175	0.00058131	4.04	0.0026634	659.2642770574172	97.454	0.23989	97.76	97.654	97.894	0.3062					23	7	4	0	0	0	0.88958	1	41035	41035		2.8892	0	1	455090000			363	5492	212	214	463	463					-0.08696433464024267
AGPGDGEG	8	Unmodified	_AGPGDGEG_					0	0	0		ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	659.26311	658.255833	1.6583	0.0010933	5.4229	0.0035751	7.0812	0.0046684	659.2669905762555	97.889	0.15443	97.889	97.784	97.939	0	0.057847	0.0012417	NaN	2.8892	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47010000			364	5492	212	214							-0.08696433464024267
AGPGDGEG	8	Unmodified	_AGPGDGEG_					0	0	0		ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	ENST00000003100.12_1_7:91761115-91763805:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	659.26311	658.255833	2.6562	0.0017511	4.5799	0.0030194	7.2361	0.0047705	659.2667600572538	97.768	0.12715	97.859	97.778	97.906	0.090881	0.027263	0.0006859	NaN	2.8892	11	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56426000			365	5492	212	214							-0.08696433464024267
AGPGGPWVQ	9	Unmodified	_AGPGGPWVQ_					0	0	0			REV__ENST00000394467.3_1_X:124461034-124461598:-|nuORF	REV__ENST00000394467.3_1_X:124461034-124461598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.4373657107353	1	868.431178	867.423902	2.7951	0.0024273	2.3932	0.0020783	5.1883	0.0045057	868.4331942100843	100.69	0.12233	100.77	100.66	100.78	0.072716					9	3	3	0	0	0	0.66839	1	42150	42150		8.5933	2.2392	1	5819600	+		366	12828	213	215	464	464					-0.015113264795786563
AGPGGPWVQ	9	Unmodified	_AGPGGPWVQ_					0	0	0			REV__ENST00000394467.3_1_X:124461034-124461598:-|nuORF	REV__ENST00000394467.3_1_X:124461034-124461598:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	868.431178	867.423902	2.7951	0.0024273	2.3932	0.0020783	5.1883	0.0045057	868.4331942100843	100.69	0.12233	100.77	100.66	100.78	0.072716	0.014473	0.00028393	NaN	8.5933	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5819600	+		367	12828	213	215							-0.015113264795786563
AGPKGRCG	8	Unmodified	_AGPKGRCG_					0	0	0		ENST00000215829.7_1_22:24951687-24951834:+|nuORF	ENST00000215829.7_1_22:24951687-24951834:+|nuORF	ENST00000215829.7_1_22:24951687-24951834:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	745.3787719607353	1	745.377368	744.370092	2.707	0.0020177	-1.6154	-0.0012041	1.0916	0.00081364	745.3770531277306	102.71	0.10606	102.89	102.86	102.96	0.18066					5	3	2	0	0	0	0.88409	1	43230	43230		6.3541	0	1	11518000			368	5515	214	216	465	465					-0.012318221829445974
AGPKGRCG	8	Unmodified	_AGPKGRCG_					0	0	0		ENST00000215829.7_1_22:24951687-24951834:+|nuORF	ENST00000215829.7_1_22:24951687-24951834:+|nuORF	ENST00000215829.7_1_22:24951687-24951834:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	745.377368	744.370092	2.4658	0.0018379	-5.395	-0.0040213	-2.9293	-0.0021834	745.3722984303697	102.8	0.10104	102.97	102.91	103.01	0.16445	0.036238	-0.0019759	NaN	6.3541	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12436000			369	5515	214	216							-0.012318221829445974
AGPLFRVRF	9	Unmodified	_AGPLFRVRF_					0	0	0			REV__ENST00000530934.5_1_11:67160948-67163588:+|nuORF	REV__ENST00000530934.5_1_11:67160948-67163588:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.2718994021416	2	531.813993	1061.61343	2.178	0.0011583	-2.4293	-0.0012919	-0.25122	-0.0001336	531.8132145673171	78.181	0.3092	79.924	79.707	80.017	1.7429					13	9	2	0	0	0	0.11787	1	32730	32730		5.2307	2.3415	1	594400	+		370	13705	215	217	466	466					0.08509165533587293
AGPLFRVRF	9	Unmodified	_AGPLFRVRF_					0	0	0			REV__ENST00000530934.5_1_11:67160948-67163588:+|nuORF	REV__ENST00000530934.5_1_11:67160948-67163588:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	531.813993	1061.61343	2.7814	0.0014792	-2.772	-0.0014742	0.0094236	5.0116E-06	532.3126735985437	78.752	0.34476	80.019	79.817	80.161	1.2668	0.047393	-0.00021934	NaN	5.2307	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593310	+		371	13705	215	217							0.08509165533587293
AGPLKPQLPT	10	Unmodified	_AGPLKPQLPT_					0	0	0		ENST00000369827.7_1_1:110217476-110217722:+|nuORF	ENST00000369827.7_1_1:110217476-110217722:+|nuORF	ENST00000369827.7_1_1:110217476-110217722:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	510.8449279665947	2	511.305667	1020.59678	1.8332	0.00093735	4.0362	0.0020637	5.8694	0.0030011	511.3079196554324	69.062	0.27701	69.062	68.893	69.17	0					12	8	2	0	0	0	0.1245	1	28724	28724		10.824	0	1	292350			372	6101	216	218	467	467					0.08730619856976318
AGPWRLSLPF	10	Unmodified	_AGPWRLSLPF_					0	0	0		ENST00000372257.6_1_1:44785331-44785385:-|nuORF	ENST00000372257.6_1_1:44785331-44785385:-|nuORF	ENST00000372257.6_1_1:44785331-44785385:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	572.7807494997978	2	572.319109	1142.62366	2.1303	0.0012192	-1.4639	-0.0008378	0.66647	0.00038143	572.3176786003505	50.539	0.2154	51.933	51.77	51.986	1.3938					12	6	3	0	0	0	0.12497	1	21147	21147		13.906	0	1	691190			373	6138	217	219	468	468					0.058057284681808596
AGPYPCPPGE	10	Unmodified	_AGPYPCPPGE_					0	0	0			REV__nc|nan|Q5SQH8|C6orf136	REV__nc|nan|Q5SQH8|C6orf136	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2182494997978	2	494.21566	986.416767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.636	1	11.398	10.898	11.898	0.76165								0	0	0	0.66155	1	4421	4421		1.8442	1.0506	1		+		374	11790	218	220	469	469					-0.07698427142315722
AGQRRKFLRFL	11	Unmodified	_AGQRRKFLRFL_					0	0	0			REV__nc|ENSG00000066294|Q9UIB8-5|CD84	REV__nc|ENSG00000066294|Q9UIB8-5|CD84	MSMS	GG20161007_CRH_Patient100_W632_02	4	696.4183837771416	2	696.422762	1390.83097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.41	1	116.56	116.06	117.06	0.15228								0	0	0	0.63775	1	50307	50307		1.4819	0.15237	1		+		375	14389	219	221	470	470					0.151189357362
AGRARGRAEV	10	Unmodified	_AGRARGRAEV_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;ENST00000553162.5_1_12:57881873-57883795:+|nuORF;ENST00000550449.5_1_12:57881846-57883182:+|nuORF;ENST00000551842.5_1_12:57881873-57883359:+|nuORF;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.8002197146416	2	521.796863	1041.57917	2.8942	0.0015102	3.2397	0.0016904	6.1339	0.0032006	521.7988366551167	79.347	0.31393	80.614	80.409	80.723	1.2668					14	9	2	0	0	0	0.80568	1	33313	33313		11.64	0	1	944990			376	3940;7244	220	222	471	471					0.06004717374685242
AGRARGRAEV	10	Unmodified	_AGRARGRAEV_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;ENST00000553162.5_1_12:57881873-57883795:+|nuORF;ENST00000550449.5_1_12:57881846-57883182:+|nuORF;ENST00000551842.5_1_12:57881873-57883359:+|nuORF;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	521.796863	1041.57917	2.1637	0.001129	3.474	0.0018127	5.6377	0.0029417	521.8003736665981	80.78	0.18724	80.78	80.666	80.853	0	0.12369	0.00048213	NaN	11.64	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305140			377	3940;7244	220	222							0.06004717374685242
AGRARGRAEV	10	Unmodified	_AGRARGRAEV_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF;ENST00000553162.5_1_12:57881873-57883795:+|nuORF;ENST00000550449.5_1_12:57881846-57883182:+|nuORF;ENST00000551842.5_1_12:57881873-57883359:+|nuORF;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1;ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	521.796863	1041.57917	2.1024	0.001097	2.3492	0.0012258	4.4516	0.0023228	521.7987992633377	78.84	0.33994	80.575	80.444	80.784	1.735	-0.081327	-0.00069176	NaN	11.64	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	767200			378	3940;7244	220	222							0.06004717374685242
AGRRLRLWRVV	11	Unmodified	_AGRRLRLWRVV_					0	0	0			REV__ENST00000603271.1_3_19:58331137-58367481:+|nuORF	REV__ENST00000603271.1_3_19:58331137-58367481:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	691.4069702029228	2	691.436204	1380.85786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.195	1	99.421	98.921	99.921	0.22545								0	0	0	0.63775	1	41737	41737		1.4819	0.15237	1		+		379	14085	221	223	472	472					0.18266044347365096
AGRRRGQPLL	10	Unmodified	_AGRRRGQPLL_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3446533083916	2	562.343981	1122.67341	2.5096	0.0014112	1.0399	0.00058477	3.5495	0.001996	562.3444453162037	87.572	0.42805	87.807	87.518	87.946	0.23471					33	13	3	0	0	0	0.89646	1	36771	36771		1.8442	0	1	4202100			380	2426	222	224	473	473					0.11697856196838075
AGRRRRRER	9	Unmodified	_AGRRRRRER_					0	0	0			REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.2114745974541	2	606.866477	1211.7184	4.2427	0.0025747	0.40736	0.00024721	4.65	0.002822	606.8666981189491	89.942	0.19049	91.346	91.24	91.431	1.4045					5	3	2	0	0	0	0.11908	1	37874	37874		0.52476	0	1	330230	+		381	13972	223	225	474	474					0.12101099782739766
AGRRRRRNLT	10	Unmodified	_AGRRRRRNLT_					0	0	0		nc|ENSG00000164877|Q8IY33-2|MICALL2	nc|ENSG00000164877|Q8IY33-2|MICALL2	nc|ENSG00000164877|Q8IY33-2|MICALL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3854247927666	2	628.38196	1254.74937	2.2664	0.0014242	2.9235	0.0018371	5.19	0.0032613	628.3838232594044	76.203	2.1525	77.497	75.954	78.106	1.2938					92	69	2	0	0	0	0.87699	1	32002	32002		3.9444	0.3479	1	2610000			382	7913	224	226	475	475					0.1321825309698852
AGRVRPSK	8	Unmodified	_AGRVRPSK_					0	0	0		ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7676879763603	2	435.767043	869.519533	1.0663	0.00046466	0.45089	0.00019648	1.5172	0.00066114	435.76692529630117	70.367	1.2651	70.367	69.675	70.94	0					89	40	3	0	0	0	0.8873	1	29245	29245		4.3292	2.0265	1	4790100			383	6854	225	227	476	476					0.07955446431333257
AGRVRPSK	8	Unmodified	_AGRVRPSK_					0	0	0		ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	ENST00000485511.5_2_6:42952321-42952423:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7679626345634	2	435.767043	869.519533	1.6863	0.00073481	0.50806	0.0002214	2.1943	0.00095621	435.76690415837396	69.979	1.2957	70.301	69.752	71.048	0.32223					93	41	3	0	0	0	0.8873	1	29155	29155		4.3292	2.0265	1	5043000			384	6854	225	227	477	477					0.07955446431333257
AGSHVKKG	8	Unmodified	_AGSHVKKG_					0	0	0		ENST00000470743.4_1_1:161326608-161332330:+|nuORF;nc|ENSG00000143252|Q99643-4|SDHC;nc|ENSG00000143252|Q99643-2|SDHC	ENST00000470743.4_1_1:161326608-161332330:+|nuORF	ENST00000470743.4_1_1:161326608-161332330:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	392.2283813357353	2	392.22722	782.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.109	1	84.37	83.87	84.87	0.26083								0	0	0	1.0178	1	35179	35179		0.69038	0	1				385	6735	226	228	478	478					0.03996379757336399
AGSVVIVVMV	10	Unmodified	_AGSVVIVVMV_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7-3|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2930786013603	2	487.291171	972.567789	2.2992	0.0011204	1.0114	0.00049285	3.3106	0.0016132	487.29183589666013	49.607	1.0329	50.999	50.735	51.767	1.3911					79	32	4	0	0	0	0.15278	2	20768	20768;20809		54.774	3.1437	1	14772000			386	3138	227	229	479;480	479					0.08040759236359918
AGSVVIVVMV	10	Unmodified	_AGSVVIVVMV_					0	0	0		ENSG00000146205|ENST00000674324|ANO7;nc|ENSG00000146205|Q6IWH7-3|ANO7;nc|ENSG00000146205|Q6IWH7|ANO7	ENSG00000146205|ENST00000674324|ANO7	ENSG00000146205|ENST00000674324|ANO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2922546267509	2	487.291171	972.567789	1.7705	0.00086275	1.3039	0.00063536	3.0744	0.0014981	487.29186843010996	48.993	1.0586	50.97	50.761	51.819	1.9772					75	33	4	0	0	0	0.22411	1	20588	20588		46.021	0.32134	1	14034000			387	3138	227	229	481	481					0.08040759236359918
AGSWPHCP	8	Unmodified	_AGSWPHCP_					0	0	0		nc|ENSG00000142632|Q8IW93-2|ARHGEF19;ENSG00000142632|ENST00000270747|ARHGEF19	nc|ENSG00000142632|Q8IW93-2|ARHGEF19	nc|ENSG00000142632|Q8IW93-2|ARHGEF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3616210818291	1	854.361384	853.354108	3.0955	0.0026447	-2.4331	-0.0020788	0.66236	0.0005659	854.3588273526924	98.438	0.23138	98.694	98.565	98.796	0.25636					20	7	4	0	0	0	0.89008	1	41453	41453		2.5775	0	1	178210000			388	3001	228	230	482	482					-0.0784352841984628
AGTLLEAIF	9	Unmodified	_AGTLLEAIF_					0	0	0			REV__ENSG00000232258|ENST00000620492|TMEM114	REV__ENSG00000232258|ENST00000620492|TMEM114	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.7649413943291	2	467.765843	933.517133	2.4744	0.0011574	-4.4866	-0.0020987	-2.0122	-0.00094125	467.7638532040881	71.871	0.34801	72.196	72.007	72.355	0.32494					15	10	2	0	0	0	0.77526	1	30100	30100		4.3292	1.44	1	600980	+		389	11901	229	231	483	483					0.047715531829908286
AGTLLIGS	8	Unmodified	_AGTLLIGS_					0	0	0			REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.2184020876884	2	366.218529	730.422505	-1.1447	-0.00041923	0.62367	0.0002284	-0.52108	-0.00019083	366.2187168963245	13.358	0.21637	14.084	13.977	14.194	0.72639					13	6	3	0	0	0	0.87106	1	5540	5540		14.582	0	1	674370	+		390	15482	230	232	484	484					0.04651039431666959
AGTLLIGS	8	Unmodified	_AGTLLIGS_					0	0	0			REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.2188598513603	2	366.218529	730.422505	-0.21543	-7.8895E-05	0.63675	0.00023319	0.42132	0.0001543	366.2188334233548	13.187	0.16	14.015	13.903	14.063	0.82789					10	6	2	0	0	0	0.80415	1	5451	5451		20.871	0	1	930440	+		391	15482	230	232	485	485					0.04651039431666959
AGTLLIGS	8	Unmodified	_AGTLLIGS_					0	0	0			REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	366.218529	730.422505	-1.1447	-0.00041923	0.62367	0.0002284	-0.52108	-0.00019083	366.2187168963245	13.358	0.21637	14.084	13.977	14.194	0.72639	0.034357	-5.0062E-06	NaN	20.871	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	674370	+		392	15482	230	232							0.04651039431666959
AGTLLIGS	8	Unmodified	_AGTLLIGS_					0	0	0			REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	REV__tr|A0A7D6VTC4|A0A7D6VTC4_9CLOTCo-chaperoninGroESOS=ClostridiumintestinaleOX=36845GN=groESPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	366.218529	730.422505	-0.21543	-7.8895E-05	0.63675	0.00023319	0.42132	0.0001543	366.2188334233548	13.187	0.16	14.015	13.903	14.063	0.82789	-0.034357	4.5746E-06	NaN	20.871	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930440	+		393	15482	230	232							0.04651039431666959
AGTSRLKDLL	10	Unmodified	_AGTSRLKDLL_					0	0	0			REV__MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	REV__MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.8199951052666	2	537.319306	1072.62406	1.8659	0.0010026	-2.9923	-0.0016078	-1.1264	-0.00060525	537.3181370898461	52.502	0.15696	52.502	52.415	52.572	0					6	4	2	0	0	0	0.12458	1	21910	21910		16.149	3.1066	1	511870	+		394	11640	231	233	486	486					0.09065103397369967
AGTTKSRK	8	Unmodified	_AGTTKSRK_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.T738Nfs*23|1|0.63|ENSG00000182168|chr4:95185120-95185121|-/T|frameshift_variant;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	424.7508727908134	2	424.751059	847.487565	0.93493	0.00039711	-0.98243	-0.00041729	-0.0475	-2.0176E-05	424.75047904559835	20.688	0.25243	20.898	20.726	20.978	0.21024					13	7	2	0	0	0	0.89176	1	8587	8587		0.79363	0.79363	1	470880			395	4601	232	234	487	487					0.057720339575212165
AGTTKSRK	8	Unmodified	_AGTTKSRK_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.T738Nfs*23|1|0.63|ENSG00000182168|chr4:95185120-95185121|-/T|frameshift_variant;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	424.751059	847.487565	0.041054	1.7438E-05	0.40827	0.00017341	0.44933	0.00019085	424.75101965130824	21.061	0.1868	21.061	20.942	21.129	0	0.12296	0.00079779	NaN	0.79363	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421120			396	4601	232	234							0.057720339575212165
AGTTKSRK	8	Unmodified	_AGTTKSRK_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.T738Nfs*23|1|0.63|ENSG00000182168|chr4:95185120-95185121|-/T|frameshift_variant;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	424.751059	847.487565	0.78468	0.00033329	-0.45145	-0.00019175	0.33323	0.00014154	424.7507471482492	19.846	0.22113	20.904	20.794	21.015	1.0585	-0.03405	6.7457E-05	NaN	0.79363	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	797080			397	4601	232	234							0.057720339575212165
AGTTKSRK	8	Unmodified	_AGTTKSRK_					0	0	0		nc|ENSG00000182168|O95185-2|UNC5C;UNC5C|p.T738Nfs*23|1|0.63|ENSG00000182168|chr4:95185120-95185121|-/T|frameshift_variant;ENSG00000182168|ENST00000453304|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	nc|ENSG00000182168|O95185-2|UNC5C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	424.751059	847.487565	0.39968	0.00016976	-0.98678	-0.00041914	-0.5871	-0.00024937	424.75063331519095	19.366	0.22626	20.89	20.722	20.949	1.5237	-0.048755	-0.00038731	NaN	0.79363	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842530			398	4601	232	234							0.057720339575212165
AGVQWRDLH	9	Unmodified	_AGVQWRDLH_					0	0	0		chr3:128622409-128624714|115|61.39|0.19|8.35|-|1|TE_info:AluSc,AluSc_dup6791,Alu,SINE,donor,+,128624714,128624845|RPN1,None|2;AluSp_dup2690|chr1:120630763-120631030:+|1.0584131623441453|0.0854575436874743|3.63|415.0|8|1|anti-sense	chr3:128622409-128624714|115|61.39|0.19|8.35|-|1|TE_info:AluSc,AluSc_dup6791,Alu,SINE,donor,+,128624714,128624845|RPN1,None|2	chr3:128622409-128624714|115|61.39|0.19|8.35|-|1|TE_info:AluSc,AluSc_dup6791,Alu,SINE,donor,+,128624714,128624845|RPN1,None|2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	541.8021728396416	2	541.280515	1080.54648	1.8877	0.0010218	-0.10422	-5.6411E-05	1.7835	0.00096538	541.2800513178485	65.108	0.43394	67.017	66.815	67.248	1.9085					16	13	2	0	0	0	0.10591	1	27357	27357		12.532	4.6214	1	3144800			399	47	233	235	488	488					0.009425102518434869
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3575927615166	1	657.356616	656.34934	0.99468	0.00065386	-0.73765	-0.0004849	0.25703	0.00016896	657.3561430581856	17.934	0.40238	17.934	17.686	18.088	0					22	12	2	0	0	0	0.87935	1	7463	7463		9.3474	1.4373	1	609920	+		400	12159	234	236	489	489					0.007419107090527177
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	657.3584472537041	1	657.356616	656.34934	0.34549	0.00022711	1.6329	0.0010734	1.9784	0.0013005	657.3576034249243	17.113	0.55604	17.264	16.933	17.489	0.15093					25	19	2	0	0	0	0.87935	1	7071	7071		9.3474	0.75416	1	561710	+		401	12159	234	236	490	490					0.007419107090527177
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	657.3578979372978	1	657.356616	656.34934	0.37667	0.00024761	0.93854	0.00061696	1.3152	0.00086457	657.3571647583406	17.642	0.54202	17.814	17.533	18.075	0.17285					23	17	2	0	0	0	0.87106	1	7317	7317		14.582	4.3983	1	554350	+		402	12159	234	236	491	491					0.007419107090527177
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	657.356616	656.34934	0.99468	0.00065386	-0.73765	-0.0004849	0.25703	0.00016896	657.3561430581856	17.934	0.40238	17.934	17.686	18.088	0	0.063595	-0.00073906	NaN	14.582	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	609920	+		403	12159	234	236							0.007419107090527177
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	657.356616	656.34934	0.37667	0.00024761	0.93854	0.00061696	1.3152	0.00086457	657.3571647583406	17.642	0.54202	17.814	17.533	18.075	0.17285	-0.055552	0.00036279	NaN	14.582	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	554350	+		404	12159	234	236							0.007419107090527177
AGVTPVGG	8	Unmodified	_AGVTPVGG_					0	0	0			REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	REV__ENST00000254998.2_1_20:23331562-23334670:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	657.356616	656.34934	0.22589	0.00014849	0.9128	0.00060004	1.1387	0.00074852	657.3572164753986	16.964	0.42911	17.862	17.708	18.137	0.89794	-0.0080437	0.00034587	NaN	14.582	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540470	+		405	12159	234	236							0.007419107090527177
AGVVVGFA	8	Unmodified	_AGVVVGFA_					0	0	0		tr|A0A553SG84|A0A553SG84_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10325PE=4SV=1	tr|A0A553SG84|A0A553SG84_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10325PE=4SV=1	tr|A0A553SG84|A0A553SG84_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10325PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2072936892509	2	360.207964	718.401375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.807	1	58.807	58.307	59.307	0								0	0	0	1.0178	1	24525	24525		2.8892	0	1				406	16098	235	237	492	492					0.030910741227899052
AGWRPHDR	8	Unmodified	_AGWRPHDR_					0	0	0			REV__nc|ENSG00000115705|P07202-6|TPO	REV__nc|ENSG00000115705|P07202-6|TPO	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.1699096560478	3	332.170375	993.489296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.541	1	50.541	50.041	51.041	0								0	0	0	1.0178	1	21083	21083		0.45834	0	1		+		407	9450	236	238	493	493					-0.007709122338724228
AGWRPHDR	8	Unmodified	_AGWRPHDR_					0	0	0			REV__nc|ENSG00000115705|P07202-6|TPO	REV__nc|ENSG00000115705|P07202-6|TPO	MSMS	GG20161007_CRH_Patient100_W632_02	4	332.1704589724541	3	332.170375	993.489296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.736	1	47.707	47.207	48.207	1.9703								0	0	0	1.0178	1	19159	19159		0.45834	0	1		+		408	9450	236	238	494	494					-0.007709122338724228
AGWRPHDR	8	Unmodified	_AGWRPHDR_					0	0	0			REV__nc|ENSG00000115705|P07202-6|TPO	REV__nc|ENSG00000115705|P07202-6|TPO	MSMS	GG20161007_CRH_Patient100_W632_02	4	332.1705810427666	3	332.170375	993.489296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.607	1	49.583	49.083	50.083	1.976								0	0	0	1.0178	1	19939	19939		0.45834	0	1		+		409	9450	236	238	495	495					-0.007709122338724228
AGYKYEREF	9	Unmodified	_AGYKYEREF_					0	0	0			REV__ENST00000476917.5_1_10:126095965-126100767:-|nuORF	REV__ENST00000476917.5_1_10:126095965-126100767:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	582.2866088747978	2	581.780013	1161.54547	3.3334	0.0019393	0.47767	0.0002779	3.811	0.0022172	581.7804029904572	72.847	0.49904	74.177	73.913	74.412	1.3298					32	15	3	0	0	0	0.116	1	30477	30477		5.2307	0	1	2207900	+		410	8671	237	239	496	496					-0.028837489077204737
AGYLQIFFK	9	Unmodified	_AGYLQIFFK_					0	0	0		tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8018066287041	2	543.80276	1085.59097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.457	1	13.151	12.651	13.651	0.69396								0	0	0	0.42693	1	5174	5174		2.0598	0	1				411	16041	238	240	497	497					0.05159521345308349
AHACDPST	8	Unmodified	_AHACDPST_					0	0	0		chr11:102402206-102403209|93|18.99|0.54|5.13|-|0|TE_info:AluSx1,AluSx1_dup72076,Alu,SINE,donor,-,102403209,102403309|TMEM123,None|1;chr19:38619530-38620337|89|71.6|0.23|8.29|+|2|TE_info:FLAM_C,FLAM_C_dup22190,Alu,SINE,donor,+,38619481,38619530|None,EIF3K|1;ENST00000489264.2_1_10:75533373-75538679:+|nuORF	chr11:102402206-102403209|93|18.99|0.54|5.13|-|0|TE_info:AluSx1,AluSx1_dup72076,Alu,SINE,donor,-,102403209,102403309|TMEM123,None|1	chr11:102402206-102403209|93|18.99|0.54|5.13|-|0|TE_info:AluSx1,AluSx1_dup72076,Alu,SINE,donor,-,102403209,102403309|TMEM123,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	401.1605407595634	2	401.163428	800.312302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.21	1	101.41	100.91	101.91	0.19076								0	0	0	1.0178	1	42559	42559		0.79363	0.10326	1				412	180	239	241	498	498					-0.09584128899018651
AHLAKKKVLRA	11	Unmodified	_AHLAKKKVLRA_					0	0	0			REV__tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	REV__tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	309.2280151247978	4	309.458116	1233.80336	1.586	0.0004908	-2.7507	-0.00085123	-1.1647	-0.00036043	309.45766966306195	60.028	0.14687	60.356	60.295	60.442	0.32809					6	4	2	0	0	0	0.14606	1	25191	25191		0	0	1	361090	+		413	15282	240	242	499	499					0.19581032475980464
AHLHVKGRQ	9	Unmodified	_AHLHVKGRQ_					0	0	0		ENST00000330175.8_2_17:48188692-48189373:-|nuORF	ENST00000330175.8_2_17:48188692-48189373:-|nuORF	ENST00000330175.8_2_17:48188692-48189373:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3033935427666	2	523.304324	1044.5941	1.6925	0.00088571	-1.6361	-0.0008562	0.056397	2.9513E-05	523.303552086807	68.689	1.446	70.542	69.657	71.103	1.853					108	46	3	0	0	0	0.66839	1	28837	28837		8.5933	0.43775	1	7991600			414	5886	241	243	500	500					0.0735820924271593
AHLVAVFNEYQ	11	Unmodified	_AHLVAVFNEYQ_					0	0	0		nc|ENSG00000122359|P50995-2|ANXA11;ENSG00000122359|ENST00000422982|ANXA11	nc|ENSG00000122359|P50995-2|ANXA11	nc|ENSG00000122359|P50995-2|ANXA11	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7754	1	2.5238	2.0238	3.0238	0.7484								0	0	0	0.63775	1	735	735		0.094841	0.094841	1				415	2153	242	244	501	501					0.007201845634881465
AHPGEGTG	8	Unmodified	_AHPGEGTG_					0	0	0		ENST00000496221.1_1_9:131021229-131021523:-|nuORF	ENST00000496221.1_1_9:131021229-131021523:-|nuORF	ENST00000496221.1_1_9:131021229-131021523:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2548705935478	2	363.164285	724.314017	2.8815	0.0010465	0.23499	8.534E-05	3.1165	0.0011318	363.16500966437206	101.81	0.17984	102	101.87	102.05	0.19076					11	5	3	0	0	0	2.3239	1	42783	42783		0.79363	0	1	4750300			416	6951	243	245	502	502					-0.059167518187450696
AHPGEGTG	8	Unmodified	_AHPGEGTG_					0	0	0		ENST00000496221.1_1_9:131021229-131021523:-|nuORF	ENST00000496221.1_1_9:131021229-131021523:-|nuORF	ENST00000496221.1_1_9:131021229-131021523:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	363.164285	724.314017	2.0172	0.00073259	0.70778	0.00025704	2.725	0.00098963	363.1656487095069	101.86	0.14925	102.03	101.96	102.11	0.17032	0.015356	0.00028872	NaN	0.79363	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13489000			417	6951	243	245							-0.059167518187450696
AHPNDHSQSF	10	Unmodified	_AHPNDHSQSF_					0	0	0		tr|A0A553SLK6|A0A553SLK6_NIACIFMNdependentNADH:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=azoRPE=3SV=1	tr|A0A553SLK6|A0A553SLK6_NIACIFMNdependentNADH:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=azoRPE=3SV=1	tr|A0A553SLK6|A0A553SLK6_NIACIFMNdependentNADH:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=azoRPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.1817809939384	3	380.500338	1138.47918	-1.6494	-0.0006276	3.1358	0.0011932	1.4864	0.00056557	380.5006429762099	0.97899	1.0727	0.97899	0.16561	1.2383	0					82	51	2	0	0	0	0.12479	1	285	285		10.899	0	1	730120			418	16337	244	246	503	503					-0.08451564749771023
AHRLKLLPM	9	Unmodified	_AHRLKLLPM_					0	0	0			REV__nc|ENSG00000198870|Q8NE28-3|STKLD1	REV__nc|ENSG00000198870|Q8NE28-3|STKLD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2227355837822	3	360.223311	1077.6481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.999	1	20.057	19.557	20.557	1.0585								0	0	0	0.42693	1	7917	7917		1.1933	0	1		+		419	11749	245	247	504	504					0.11238665350037991
AHRLKLLPM	9	Unmodified	_AHRLKLLPM_					0	0	0			REV__nc|ENSG00000198870|Q8NE28-3|STKLD1	REV__nc|ENSG00000198870|Q8NE28-3|STKLD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2224304080009	3	360.223311	1077.6481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.226	1	20.285	19.785	20.785	1.0585								0	0	0	0.42693	1	8010	8010		1.1933	0	1		+		420	11749	245	247	505	505					0.11238665350037991
AIAAFHVPI	9	Unmodified	_AIAAFHVPI_					0	0	0			REV__tr|A0A553SSZ4|A0A553SSZ4_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04065PE=4SV=1	REV__tr|A0A553SSZ4|A0A553SSZ4_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.7784911990166	2	469.776545	937.538538	2.2861	0.001074	2.1204	0.00099609	4.4065	0.0020701	469.7774170268257	76.325	0.51927	76.325	76.041	76.561	0					43	16	3	0	0	0	0.75267	1	31742	31742		5.2307	2.6532	1	15131000	+		421	15223	246	248	506	506					0.06726983002374709
AIAAFHVPI	9	Unmodified	_AIAAFHVPI_					0	0	0			REV__tr|A0A553SSZ4|A0A553SSZ4_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04065PE=4SV=1	REV__tr|A0A553SSZ4|A0A553SSZ4_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.7787963747978	2	469.776545	937.538538	3.0142	0.001416	1.1865	0.00055738	4.2007	0.0019734	469.7769894371031	76.172	0.51747	76.493	76.176	76.694	0.32163					41	16	3	0	0	0	0.75267	1	31813	31813		5.2307	2.6532	1	27676000	+		422	15223	246	248	507	507					0.06726983002374709
AIAARICN	8	Unmodified	_AIAARICN_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2295410037041	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.399	1	29.164	28.664	29.664	1.7646								0	0	0	1.0178	1	11467	11467		0.79363	0	1		+		423	11111	247	249	508	508					0.021253065396649617
AIAGVCGGIAE	11	Unmodified	_AIAGVCGGIAE_					0	0	0		tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7473632693291	2	480.744585	959.474617	1.7587	0.00084547	2.8521	0.0013712	4.6108	0.0022166	480.7460449456591	96.71	0.19794	96.71	96.602	96.8	0					16	6	3	0	0	0	0.31972	1	40420	40420		30.637	5.2372	1	16210000			424	16604	248	250	509	509					-0.006741652168898327
AIAGVCGGIAE	11	Unmodified	_AIAGVCGGIAE_					0	0	0		tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7494384646416	2	480.744585	959.474617	3.1556	0.0015171	4.0851	0.0019639	7.2408	0.003481	480.74654529751416	96.074	0.27316	96.476	96.336	96.609	0.40208					20	8	3	0	0	0	0.31972	1	40445	40445		30.637	2.1497	1	13281000			425	16604	248	250	510	510					-0.006741652168898327
AIAGVCGGIAE	11	Unmodified	_AIAGVCGGIAE_					0	0	0		tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	tr|A0A553SSD0|A0A553SSD0_NIACIPspCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	480.744585	959.474617	3.524	0.0016941	1.154	0.0005548	4.678	0.0022489	480.74514951757396	96.561	0.18169	96.666	96.573	96.755	0.10499	0.033206	-0.0012749	NaN	30.637	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14446000			426	16604	248	250							-0.006741652168898327
AIAPIIAAV	9	Unmodified	_AIAPIIAAV_					0	0	0		ELAC2|p.G331Rfs*34|1|0.18|ENSG00000006744|chr17:13003568-13003569|-/C|frameshift_variant;nc|ENSG00000006744|Q9BQ52-2|ELAC2;ENST00000484122.5_1_17:12899737-12920449:-|nuORF;ENST00000480891.5_1_17:12896137-12909314:-|nuORF;nc|ENSG00000006744|Q9BQ52-4|ELAC2;ENSG00000006744|ENST00000338034|ELAC2	ELAC2|p.G331Rfs*34|1|0.18|ENSG00000006744|chr17:13003568-13003569|-/C|frameshift_variant	ELAC2|p.G331Rfs*34|1|0.18|ENSG00000006744|chr17:13003568-13003569|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	419.7739745974541	2	419.773471	837.53239	1.7304	0.00072638	1.6182	0.00067926	3.3485	0.0014056	419.7737417611255	65.867	0.27189	67.776	67.679	67.951	1.9085					16	8	2	0	0	0	0.11074	1	27633	27633		45.75	9.2838	1	1104600			427	446	249	251	511	511					0.1071246477083605
AIARRITE	8	Unmodified	_AIARRITE_					0	0	0			REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2796203494072	2	465.279983	928.545414	1.9477	0.00090621	-0.36074	-0.00016784	1.5869	0.00073836	465.2798267030071	71.114	0.50887	71.114	70.78	71.288	0					26	15	2	0	0	0	0.87803	1	29549	29549		10.183	0.83596	1	958860	+		428	15918	250	252	512	512					0.07828295882927705
AIARRITE	8	Unmodified	_AIARRITE_					0	0	0			REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	465.279983	928.545414	1.9477	0.00090621	-0.36074	-0.00016784	1.5869	0.00073836	465.2798267030071	71.114	0.50887	71.114	70.78	71.288	0	-0.067073	-0.00096038	NaN	10.183	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	958860	+		429	15918	250	252							0.07828295882927705
AIARRITE	8	Unmodified	_AIARRITE_					0	0	0			REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	465.279983	928.545414	2.8519	0.0013269	1.5293	0.00071154	4.3811	0.0020385	465.2806297566987	69.865	0.46933	71.219	71.021	71.491	1.3536	0.037949	0.00079838	NaN	10.183	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719930	+		430	15918	250	252							0.07828295882927705
AIARRITE	8	Unmodified	_AIARRITE_					0	0	0			REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	REV__tr|A0A7D7AFH9|A0A7D7AFH9_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05710PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	465.279983	928.545414	2.6791	0.0012465	1.3959	0.0006495	4.075	0.001896	465.280441525557	69.442	0.72767	71.295	71.136	71.864	1.853	0.11403	0.0006743	NaN	10.183	30	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	816280	+		431	15918	250	252							0.07828295882927705
AIDAATQTE	9	Unmodified	_AIDAATQTE_					0	0	0		nc|ENSG00000101447|Q9H4H8-2|FAM83D;ENSG00000101447|ENST00000619850|FAM83D	nc|ENSG00000101447|Q9H4H8-2|FAM83D	nc|ENSG00000101447|Q9H4H8-2|FAM83D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	919.4364501833916	1	919.436717	918.429441	0.38721	0.00035602	0.61699	0.00056728	1.0042	0.0009233	919.4382114750409	19.377	0.14348	20.901	20.805	20.949	1.5237					6	4	2	0	0	0	0.68551	1	8059	8059		7.9102	0.62092	1	433340			432	1352	251	253	513	513					-0.033036924784482835
AIDDNKNK	8	Unmodified	_AIDDNKNK_					0	0	0		tr|A0A7D6ZVE9|A0A7D6ZVE9_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14785PE=4SV=1	tr|A0A7D6ZVE9|A0A7D6ZVE9_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14785PE=4SV=1	tr|A0A7D6ZVE9|A0A7D6ZVE9_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14785PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1725036501884	2	459.237981	916.461409	0.71287	0.00032738	-1.2381	-0.00056861	-0.52528	-0.00024123	459.2375807137833	14.2	0.52312	14.2	13.825	14.349	0					23	16	2	0	0	0	2.3239	1	5923	5923		2.0598	0	1	1019600			433	17151	252	254	514	514					-0.00016280004626878508
AIDNALDARD	10	Unmodified	_AIDNALDARD_					0	0	0			REV__tr|A0A553SUM1|A0A553SUM1_NIACIAlpha-acetolactatedecarboxylaseOS=NialliacirculansOX=1397GN=budAPE=3SV=1	REV__tr|A0A553SUM1|A0A553SUM1_NIACIAlpha-acetolactatedecarboxylaseOS=NialliacirculansOX=1397GN=budAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	537.8343383669853	2	537.264727	1072.5149	2.8487	0.0015305	-0.089067	-4.7852E-05	2.7596	0.0014826	537.2638587791183	72.358	0.34271	74.168	74.105	74.448	1.8101					18	10	3	0	0	0	0.12425	1	30348	30348		19.257	2.1441	1	910430	+		434	15295	253	255	515	515					-0.018455272927667465
AIDNALDARD	10	Unmodified	_AIDNALDARD_					0	0	0			REV__tr|A0A553SUM1|A0A553SUM1_NIACIAlpha-acetolactatedecarboxylaseOS=NialliacirculansOX=1397GN=budAPE=3SV=1	REV__tr|A0A553SUM1|A0A553SUM1_NIACIAlpha-acetolactatedecarboxylaseOS=NialliacirculansOX=1397GN=budAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	537.264727	1072.5149	3.6012	0.0019348	0.93439	0.00050201	4.5356	0.0024368	537.2648011750654	72.869	0.40663	74.199	74.036	74.443	1.3297	0.015269	0.00074895	NaN	13.906	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	960300	+		435	15295	253	255							-0.018455272927667465
AIDPGRRRPL	10	Unmodified	_AIDPGRRRPL_					0	0	0		ENST00000370664.3_1_10:99258747-99258948:+|nuORF	ENST00000370664.3_1_10:99258747-99258948:+|nuORF	ENST00000370664.3_1_10:99258747-99258948:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8473388552666	2	575.843813	1149.67307	2.7687	0.0015943	-0.7759	-0.0004468	1.9928	0.0011475	575.8432705671981	75.07	0.68332	76.851	76.513	77.196	1.7817					53	21	3	0	0	0	0.87699	1	31352	31352		3.9444	0	1	2018100			436	6120	254	256	516	516					0.10422436476960684
AIDPHLLLSV	10	Unmodified	_AIDPHLLLSV_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3194457888603	2	539.318774	1076.623	1.4973	0.00080753	0.40548	0.00021868	1.9028	0.0010262	539.3189885719241	68.374	0.31629	68.374	68.201	68.517	0					17	9	2	0	0	0	0.28905	2	28507	28455;28507		39.95	20.511	1	1424300			437	2143	255	257	517;518	518					0.08774889028472899
AIDPHLLLSV	10	Unmodified	_AIDPHLLLSV_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3195068240166	2	539.318774	1076.623	1.6906	0.00091177	1.3185	0.00071109	3.0091	0.0016229	539.319116658203	67.903	0.35211	68.226	68.057	68.409	0.32269					18	10	2	0	0	0	0.12205	2	28402	28402;28449		60.074	29.437	1	1331300			438	2143	255	257	519;520	519					0.08774889028472899
AIDPHLLLSV	10	Unmodified	_AIDPHLLLSV_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	539.318774	1076.623	1.9209	0.001036	0.39878	0.00021507	2.3197	0.0012511	539.3186756535428	66.987	0.096893	68.376	68.31	68.407	1.3888	0.05047	-0.00051334	NaN	60.074	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294130			439	2143	255	257							0.08774889028472899
AIEEQIASNT	10	Unmodified	_AIEEQIASNT_					0	0	0		ENSG00000169087|ENST00000306103|HSPBAP1	ENSG00000169087|ENST00000306103|HSPBAP1	ENSG00000169087|ENST00000306103|HSPBAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.3036376833916	2	538.266936	1074.51932	3.6373	0.0019579	3.347	0.0018016	6.9843	0.0037594	538.2688505506255	73.99	0.46813	75.308	75.062	75.53	1.318					30	14	3	0	0	0	0.12399	1	31131	31131		22.736	5.6234	1	1794400			440	4067	256	258	521	521					-0.01496062869864545
AIESTKEKL	9	Unmodified	_AIESTKEKL_					0	0	0			REV__ENST00000513040.5_2_5:125695875-125801126:+|nuORF	REV__ENST00000513040.5_2_5:125695875-125801126:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7939025759697	2	509.792589	1017.57063	2.8512	0.0014535	0.36019	0.00018362	3.2114	0.0016371	509.7926997182024	60.991	0.49161	62.957	62.79	63.282	1.9653					44	15	4	0	0	0	0.48482	1	25648	25648		23.148	1.4018	1	13108000	+		441	13584	257	259	522	522					0.06254305894856316
AIEVIDGLKIH	11	Unmodified	_AIEVIDGLKIH_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3586303591728	2	604.355888	1206.69722	4.1888	0.0025315	1.99	0.0012027	6.1788	0.0037342	604.356793904882	86.369	0.59431	87.916	87.638	88.232	1.547					72	21	4	0	0	0	1.0174	1	36483	36483		2.7352	1.0826	1	29157000	+		442	8969	258	260	523	523					0.10214232119983535
AIFAVDSGVML	11	Unmodified	_AIFAVDSGVML_					0	0	0			REV__ENSG00000226288|ENST00000641896|OR52I2	REV__ENSG00000226288|ENST00000641896|OR52I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7977172732353	2	561.796817	1121.57908	2.9628	0.0016645	-0.9116	-0.00051213	2.0512	0.0011524	561.7959998310657	62.618	0.17616	64.031	63.869	64.045	1.4134					9	5	2	0	0	0	0.50052	1	26256	26256		24.021	3.5669	1	2815900	+		443	11894	259	261	524	524					0.023155365398451977
AIFGFYDK	8	Unmodified	_AIFGFYDK_					0	0	0		nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;ENST00000471736.5_1_4:158142110-158255356:+|nuORF;GRIA2|p.L542Mfs*16|1|0.37|ENSG00000120251|chr4:157336524-157336530|CCTTTAG/-|frameshift_variant;nc|ENSG00000120251|P42262-4|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7484008669853	2	480.744911	959.475269	3.9934	0.0019198	1.5952	0.00076689	5.5886	0.0026867	480.7457938331791	96.259	0.24652	96.68	96.572	96.818	0.4212					17	7	3	0	0	0	0.7528	1	40486	40486		25.399	1.3787	1	14124000			444	2098	260	262	525	525					-0.00609002505530043
AIFGFYDK	8	Unmodified	_AIFGFYDK_					0	0	0		nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;ENST00000471736.5_1_4:158142110-158255356:+|nuORF;GRIA2|p.L542Mfs*16|1|0.37|ENSG00000120251|chr4:157336524-157336530|CCTTTAG/-|frameshift_variant;nc|ENSG00000120251|P42262-4|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7489807009697	2	480.744911	959.475269	3.1556	0.0015171	3.4071	0.0016379	6.5627	0.003155	480.74654529751416	96.074	0.27316	96.476	96.336	96.609	0.40208					20	8	3	0	0	0	0.7528	1	40394	40394		25.399	2.2509	1	13281000			445	2098	260	262	526	526					-0.00609002505530043
AIFIPNLL	8	Unmodified	_AIFIPNLL_					0	0	0		tr|A0A7D6VQJ2|A0A7D6VQJ2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_03515PE=4SV=1	tr|A0A7D6VQJ2|A0A7D6VQJ2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_03515PE=4SV=1	tr|A0A7D6VQJ2|A0A7D6VQJ2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_03515PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.7873412966728	2	450.781296	899.54804	3.45	0.0015552	0.58386	0.00026319	4.0339	0.0018184	450.7814711197475	91.775	0.38419	93.101	92.86	93.244	1.3269					30	11	3	0	0	0	0.78622	1	38653	38653		22.453	1.5814	1	4859400			446	16799	261	263	527	527					0.09424751287883737
AIFRSKKVMA	10	Unmodified	_AIFRSKKVMA_					0	0	0		tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8454467654228	2	575.841894	1149.66923	2.2096	0.0012724	3.45	0.0019866	5.6596	0.003259	575.8434853845099	89.794	0.41097	89.794	89.558	89.969	0					33	12	3	0	0	0	0.89803	1	37578	37578		1.4819	0.8804	1	4281900			447	16987	262	264	528	528					0.10038630658937109
AIGAIAALVL	10	Unmodified	_AIGAIAALVL_					0	0	0		tr|A0A553SUK8|A0A553SUK8_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_00565PE=3SV=1	tr|A0A553SUK8|A0A553SUK8_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_00565PE=3SV=1	tr|A0A553SUK8|A0A553SUK8_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_00565PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3010131716728	2	456.299853	910.585153	2.3658	0.0010795	-0.10354	-4.7245E-05	2.2623	0.0010323	456.2997938141755	40.62	0.31538	42.483	42.296	42.611	1.8624					16	9	2	0	0	0	0.28071	1	16993	16993		40.449	8.3316	1	971240			448	16696	263	265	529	529					0.1262842283365444
AIGGSIMGIGI	11	Unmodified	_AIGGSIMGIGI_					0	0	0			REV__tr|A0A7D7A4E6|A0A7D7A4E6_9CLOTDUF308domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01365PE=4SV=1	REV__tr|A0A7D7A4E6|A0A7D7A4E6_9CLOTDUF308domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7797729372978	2	494.778428	987.542302	1.5059	0.00074507	1.2488	0.00061789	2.7547	0.001363	494.7793375532052	75.842	0.47729	75.842	75.534	76.011	0					34	14	3	0	0	0	0.40086	1	31540	31540		26.884	2.8631	1	1935600	+		449	15870	264	266	530	530					0.0480328471392113
AIGLAVLYY	9	Unmodified	_AIGLAVLYY_					0	0	0		tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5629760622978	1	982.560795	981.553519	3.2927	0.0032353	-0.58403	-0.00057384	2.7087	0.0026614	982.5600930018919	75.445	4.7328	76.752	76.247	80.98	1.3063					380	152	4	0	0	0	0.08022	19	31631	31527;31579;31631;31681;31720;31798;31837;31876;31915;31958;32009;32062;32114;32162;32243;32388;32688;32796;33209		56.048	8.2929	1	50304000			450	16042	265	267	531;532;533;534;535;536;537;538;539;540;541;542;543;544;545;546;547;548;549	533					0.062004300797070755
AIGLAVLYY	9	Unmodified	_AIGLAVLYY_					0	0	0		tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7843505740166	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.451	1	77.745	77.245	78.245	1.2938								0	0	0	0.341	1	32095	32095		14.582	0	1				451	16042	265	267	550	550					0.062004300797070755
AIGLAVLYY	9	Unmodified	_AIGLAVLYY_					0	0	0		tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5630981326103	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.08022	21	31380	31343;31380;31419;31458;31497;31536;31575;31614;31653;31693;31797;31849;31887;31927;31968;32111;32256;32307;32478;32597;32647		56.048	9.2838	1	44767000			452	16042	265	267	551;552;553;554;555;556;557;558;559;560;561;562;563;564;565;566;567;568;569;570;571	552					0.062004300797070755
AIGLAVLYY	9	Unmodified	_AIGLAVLYY_					0	0	0		tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7872802615166	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.721	1	78.488	77.988	78.988	1.7672								0	0	0	0.27219	1	32181	32181		20.871	6.2895	1				453	16042	265	267	572	572					0.062004300797070755
AIGLAVLYY	9	Unmodified	_AIGLAVLYY_					0	0	0		tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	tr|A0A553SF56|A0A553SF56_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08255PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7852355837822	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.237	1	78.988	78.488	79.488	1.7514								0	0	0	0.341	1	32391	32391		14.582	0	1				454	16042	265	267	573	573					0.062004300797070755
AIGVSILASGQ	11	Unmodified	_AIGVSILASGQ_					0	0	0		tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2891113162041	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.478	1	44.478	43.978	44.978	0								0	0	0	0.63767	1	18612	18612		15.248	3.0078	1				455	16486	266	268	574	574					0.06425725614712974
AIHCNPPSSS	10	Unmodified	_AIHCNPPSSS_					0	0	0			REV__chr9:34093448-34098324|169|10.25|0.49|4.4|-|1|DCAF12,DCAF12|1	REV__chr9:34093448-34098324|169|10.25|0.49|4.4|-|1|DCAF12,DCAF12|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7322265505791	2	506.729466	1011.44438	2.2644	0.0011474	1.8444	0.00093463	4.1088	0.0020821	506.73048470515624	63.053	0.28229	63.053	62.926	63.208	0					12	8	2	0	0	0	0.87699	1	26331	26331		3.9444	0.3479	1	638620	+		456	8349	267	269	575	575					-0.0608852388206742
AIIAIFRKLKK	11	Unmodified	_AIIAIFRKLKK_					0	0	0			REV__ENSG00000255154|ENST00000461393|HTD2	REV__ENSG00000255154|ENST00000461393|HTD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1301.692675769329	1	1300.88274	1299.87546	0.28088	0.00036539	-1.2089	-0.0015726	-0.92799	-0.0012072	1301.8846068621153	55.819	0.081284	57.229	57.16	57.241	1.4099					6	5	2	0	0	0	0.14606	1	23374	23374		1.4819	0	1	13970000	+		457	11969	268	270	576	576					0.23751946829656845
AIIDKYIKL	9	Unmodified	_AIIDKYIKL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.5626098513603	3	359.561987	1075.66413	1.468	0.00052782	1.0688	0.00038431	2.5368	0.00091214	359.56244103002746	49.112	0.33465	49.442	49.288	49.623	0.33019					21	10	3	0	0	0	0.56115	1	20611	20611		12.873	3.3286	1	983940			458	664	269	271	577	577					0.12932650067932627
AIIDKYIKL	9	Unmodified	_AIIDKYIKL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8403808474541	2	538.839342	1075.66413	2.3739	0.0012791	2.3582	0.0012707	4.7321	0.0025498	539.3423460153223	47.76	0.21756	49.143	48.986	49.204	1.3825					12	6	2	0	0	0	0.17733	1	19997	19997		38.176	9.094	1	441950			459	664	269	271	578	578					0.12932650067932627
AIIDKYIKL	9	Unmodified	_AIIDKYIKL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	359.561987	1075.66413	-0.66268	-0.00023827	1.7912	0.00064404	1.1285	0.00040576	359.5627783938426	49.717	0.25275	49.717	49.531	49.784	0	0.13749	0.00042299	NaN	12.873	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	770830			460	664	269	271							0.12932650067932627
AIIDKYIKL	9	Unmodified	_AIIDKYIKL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	538.839342	1075.66413	1.7742	0.000956	1.5585	0.00083976	3.3327	0.0017958	538.8398509239145	49.108	0.11532	49.438	49.383	49.499	0.33019	0.14771	-0.00040437	NaN	38.176	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280210			461	664	269	271							0.12932650067932627
AIIDLSDDV	9	Unmodified	_AIIDLSDDV_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7484008669853	2	480.747847	959.481142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.812	1	96.812	96.312	97.312	0								0	0	0	0.42693	1	40473	40473		3.9444	0	1		+		462	8818	270	272	579	579					-0.00021948784512915154
AIIGAGILYL	10	Unmodified	_AIIGAGILYL_					0	0	0		nc|ENSG00000171885|P55087-2|AQP4;ENSG00000171885|ENST00000383168|AQP4	nc|ENSG00000171885|P55087-2|AQP4	nc|ENSG00000171885|P55087-2|AQP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.3127014040947	2	502.312961	1002.61137	2.4048	0.001208	-1.1632	-0.00058427	1.2416	0.00062369	502.31196895014546	88.972	0.35025	88.972	88.827	89.178	0					14	10	2	0	0	0	0.70643	1	37186	37186		18.135	3.5533	1	1667200			463	4218	271	273	580	580					0.11016692005114237
AIIGGMFTV	9	Unmodified	_AIIGGMFTV_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	908.4924804568291	1	908.491001	907.483725	1.7603	0.0015992	0.024379	2.2148E-05	1.7847	0.0016214	908.4912336718392	75.412	0.38054	75.412	75.216	75.597	0					33	11	4	0	0	0	0.02596	2	31400	31356;31400		93.883	36.412	1	5646100			464	2295	272	274	581;582	582					0.026282281394401252
AIIGGMFTV	9	Unmodified	_AIIGGMFTV_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	908.4935180544853	1	908.491001	907.483725	2.6466	0.0024044	-0.093412	-8.4864E-05	2.5532	0.0023195	908.4909958514318	74.903	0.40451	75.227	75.02	75.425	0.32464					32	12	3	0	0	0	0.02596	2	31347	31295;31347		93.883	36.412	1	5318700			465	2295	272	274	583;584	584					0.026282281394401252
AIIGGMFTV	9	Unmodified	_AIIGGMFTV_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	908.4927856326103	1	908.491001	907.483725	3.1602	0.002871	-0.48038	-0.00043642	2.6798	0.0024346	908.4905103957544	73.852	0.47087	75.17	74.935	75.405	1.318					43	14	4	0	0	0	0.010702	3	30970	30930;30970;31023		106.85	39.502	1	11173000			466	2295	272	274	585;586;587	586					0.026282281394401252
AIIGGMFTV	9	Unmodified	_AIIGGMFTV_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MSMS	GG20161007_CRH_Patient100_W632_01	3	454.7505981326103	2	454.749139	907.483725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.816	1	75.135	74.635	75.635	1.318								0	0	0	0.29162	1	30976	30976		19.439	3.6708	1				467	2295	272	274	588	588					0.026282281394401252
AIIGGMFTV	9	Unmodified	_AIIGGMFTV_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	908.4929687380791	1	908.491001	907.483725	2.4505	0.0022263	0.10757	9.7727E-05	2.5581	0.002324	908.4910434735489	73.32	0.56142	75.13	74.893	75.454	1.8101					45	17	4	0	0	0	0.010702	3	30745	30700;30745;30786		106.85	39.502	1	11336000			468	2295	272	274	589;590;591	590					0.026282281394401252
AIIGGMFTV	9	Oxidation (M)	_AIIGGM(Oxidation (M))FTV_		AIIGGM(1)FTV		AIIGGM(54)FTV	0	0	1		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	924.4919311404228	1	924.485916	923.478639	2.3798	0.0022	1.5515	0.0014344	3.9313	0.0036344	924.4878253263441	59.768	0.30738	60.095	59.934	60.242	0.32711					15	9	2	0	0	0	0.087207	1	25018	25018		53.576	6.6547	1	794190			469	2295	272	275	592	592		42			0.013839242768312943
AIIGGMFTV	9	Oxidation (M)	_AIIGGM(Oxidation (M))FTV_					0	0	1		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35557249-35557401|157|100.27|0.65|7.26|+|2|ERGIC3,None|1;ENST00000488384.1_1_20:34144716-34145272:+|nuORF	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	924.485916	923.478639	1.3948	0.0012894	1.6138	0.0014919	3.0085	0.0027813	924.4875570511005	58.58	0.41236	59.998	59.877	60.289	1.4181	-0.13718	0.00029439	NaN	53.576	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1330800			470	2295	272	275				42			0.013839242768312943
AIIGGTFTV	9	Unmodified	_AIIGGTFTV_					0	0	0		nc|ENSG00000113719|Q969X5-2|ERGIC1;ENSG00000113719|ENST00000393784|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	878.5032226443291	1	878.498195	877.490919	2.1062	0.0018503	0.25731	0.00022605	2.3635	0.0020763	878.4986289438108	62.32	0.3429	62.32	62.118	62.461	0					17	10	2	0	0	0	0.04206	1	25942	25942		74.396	10.833	1	1222900			471	1838	273	276	593	593					0.047272840115169856
AIIGGTFTV	9	Unmodified	_AIIGGTFTV_					0	0	0		nc|ENSG00000113719|Q969X5-2|ERGIC1;ENSG00000113719|ENST00000393784|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	nc|ENSG00000113719|Q969X5-2|ERGIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	878.5032226443291	1	878.498195	877.490919	2.018	0.0017728	0.7091	0.00062294	2.7271	0.0023957	878.4986405764945	61.852	0.3724	62.182	61.949	62.321	0.32974					19	11	2	0	0	0	0.10722	1	25868	25868		46.921	8.7697	1	1328800			472	1838	273	276	594	594					0.047272840115169856
AIIGTGFSL	9	Unmodified	_AIIGTGFSL_					0	0	0			REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	878.4997436404228	1	878.498195	877.490919	2.018	0.0017728	0.7091	0.00062294	2.7271	0.0023957	878.4986405764945	61.852	0.3724	62.182	61.949	62.321	0.32974					19	11	2	0	0	0	0.046276	1	25917	25917		70.716	0	1	1328800	+		473	15838	274	277	595	595					0.04727284011528354
AIIGTGFSL	9	Unmodified	_AIIGTGFSL_					0	0	0			REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	878.5006591677666	1	878.498195	877.490919	3.1785	0.0027923	0.18356	0.00016126	3.3621	0.0029536	878.4983288663944	60.678	0.41133	62.098	61.903	62.314	1.4196					27	12	3	0	0	0	0.069258	1	25411	25411		60.39	0	1	2868900	+		474	15838	274	277	596	596					0.04727284011528354
AIIGTGFSL	9	Unmodified	_AIIGTGFSL_					0	0	0			REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	REV__tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	878.5005370974541	1	878.498195	877.490919	3.0925	0.0027168	0.14862	0.00013056	3.2411	0.0028473	878.4983021526704	60.194	0.34544	62.159	61.947	62.292	1.9653					24	10	3	0	0	0	0.087207	1	25215	25215		53.576	0	1	2577200	+		475	15838	274	277	597	597					0.04727284011528354
AIINCYDR	8	Unmodified	_AIINCYDR_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.2386047244072	2	484.236927	966.459301	1.9241	0.00093174	1.5501	0.0007506	3.4742	0.0016823	484.23719075992335	74.604	0.2513	74.604	74.462	74.714	0					12	7	2	0	0	0	0.88504	1	31056	31056		5.7604	0	1	719330	+		476	9600	275	278	598	598					-0.025270320140862168
AIINCYDR	8	Unmodified	_AIINCYDR_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	484.236927	966.459301	1.9241	0.00093174	1.5501	0.0007506	3.4742	0.0016823	484.23719075992335	74.604	0.2513	74.604	74.462	74.714	0	0.15614	0.0002155	NaN	5.7604	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719330	+		477	9600	275	278							-0.025270320140862168
AIINCYDR	8	Unmodified	_AIINCYDR_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	484.236927	966.459301	3.2654	0.0015812	0.77085	0.00037328	4.0363	0.0019545	484.2379275788987	74.13	0.22233	74.455	74.328	74.55	0.32494	0.0065328	-0.00053914	NaN	5.7604	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	460370	+		478	9600	275	278							-0.025270320140862168
AIINCYDR	8	Unmodified	_AIINCYDR_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	484.236927	966.459301	3.5823	0.0017347	0.92248	0.0004467	4.5048	0.0021814	484.2369179336787	73.067	0.27907	74.396	74.227	74.506	1.3297	-0.051725	-0.00039229	NaN	5.7604	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1046800	+		479	9600	275	278							-0.025270320140862168
AIINCYDR	8	Unmodified	_AIINCYDR_					0	0	0			REV__nc|ENSG00000121933|P0DMS9|TMIGD3	REV__nc|ENSG00000121933|P0DMS9|TMIGD3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	484.236927	966.459301	2.5833	0.0012509	2.3171	0.001122	4.9004	0.0023729	484.2376283700257	72.527	0.28166	74.337	74.198	74.48	1.8101	-0.11095	0.00095832	NaN	5.7604	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1142300	+		480	9600	275	278							-0.025270320140862168
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7880737185478	2	472.786776	943.558998	2.3017	0.0010882	0.46953	0.00022199	2.7712	0.0013102	472.7871140174314	78.613	0.25129	78.613	78.441	78.693	0					13	7	2	0	0	0	0.046276	2	32727	32684;32727		70.716	6.4792	1	5176100			481	1702	276	279	599;600	600					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	944.5677368044853	1	944.566275	943.558998	1.7011	0.0016068	-0.17991	-0.00016993	1.5211	0.0014368	944.5660884707589	78.563	0.37802	78.563	78.409	78.787	0					26	11	3	0	0	0	0.046276	1	32749	32749		70.716	6.4792	1	2325400			482	1702	276	279	601	601					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	944.5668212771416	1	944.566275	943.558998	1.8578	0.0017548	0.44171	0.00041723	2.2995	0.0021721	944.5662968733778	78.156	0.35075	78.465	78.259	78.61	0.30932					22	10	3	0	0	0	0.046276	1	32644	32644		70.716	6.4792	1	3051200			483	1702	276	279	602	602					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7912780642509	2	472.786776	943.558998	2.5751	0.0012175	3.5382	0.0016728	6.1133	0.0028903	472.7888541068077	78.128	0.31969	78.437	78.259	78.579	0.30933					22	9	3	0	0	0	0.087207	1	32687	32687		53.576	5.2297	1	2910800			484	1702	276	279	603	603					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7891418337822	2	472.786776	943.558998	2.7014	0.0012772	0.49579	0.0002344	3.1972	0.0015116	472.78693648780103	77.113	0.72623	78.394	77.875	78.601	1.2809					52	22	4	0	0	0	0.028763	3	32326	32326;32371;32410		89.427	7.8137	1	12474000			485	1702	276	279	604;605;606	604					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	944.5681640505791	1	944.566275	943.558998	2.2622	0.0021368	-0.43466	-0.00041057	1.8276	0.0017263	944.5660028394349	77.154	0.63028	78.435	78.001	78.631	1.2809					41	19	4	0	0	0	0.046276	1	32426	32426		70.716	6.4792	1	9284200			486	1702	276	279	607	607					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	944.5661498904228	1	944.566275	943.558998	2.5778	0.0024349	-1.3207	-0.0012475	1.2571	0.0011874	944.5649183177874	76.633	0.41647	78.4	78.159	78.576	1.7672					30	12	3	0	0	0	0.03795	2	32103	32103;32191		77.984	6.8507	1	5864400			487	1702	276	279	608;609	608					0.08496108871520391
AIISELVSI	9	Unmodified	_AIISELVSI_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000532383.5_1_11:10821544-10823273:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7885314822197	2	472.786776	943.558998	2.634	0.0012453	0.025259	1.1942E-05	2.6593	0.0012573	472.7867111716009	76.667	0.57439	78.434	78.033	78.608	1.7672					39	17	3	0	0	0	0.01705	3	32112	32112;32148;32187		101.72	8.8998	1	8057000			488	1702	276	279	610;611;612	610					0.08496108871520391
AIISKLVAL	9	Unmodified	_AIISKLVAL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;TANC1|p.K420N|1|0.07|ENSG00000115183|chr2:159170714-159170714|G/T|missense_variant	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.3166076540947	2	464.315503	926.616454	1.621	0.00075264	-0.032344	-1.5018E-05	1.5886	0.00073762	464.31558072689097	56.662	0.24353	58.077	57.94	58.183	1.4145					12	7	2	0	0	0	0.12251	1	23752	23752		41.84	3.6641	1	1851000			489	1901	277	280	613	613					0.15020995867757847
AIISKLVAL	9	Unmodified	_AIISKLVAL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;TANC1|p.K420N|1|0.07|ENSG00000115183|chr2:159170714-159170714|G/T|missense_variant	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	464.315503	926.616454	1.4612	0.00067846	-0.23609	-0.00010962	1.2251	0.00056884	464.31550988345435	56.051	0.27814	58.02	57.871	58.149	1.9684	-0.028527	-9.7614E-05	NaN	41.84	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1456900			490	1901	277	280							0.15020995867757847
AIKKAIRIL	9	Unmodified	_AIKKAIRIL_					0	0	0		ENST00000394980.5_1_4:90816014-90816095:+|nuORF	ENST00000394980.5_1_4:90816014-90816095:+|nuORF	ENST00000394980.5_1_4:90816014-90816095:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3682128787041	2	513.363319	1024.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.18	1	100.25	99.754	100.75	0.072716								0	0	0	0.42693	1	41944	41944		1.8442	1.3195	1				491	6286	278	281	614	614					0.20071768778643673
AILAGETPV	9	Unmodified	_AILAGETPV_					0	0	0		tr|A0A553SGN4|A0A553SGN4_NIACIPhosphoribosylamine--glycineligaseOS=NialliacirculansOX=1397GN=purDPE=3SV=1	tr|A0A553SGN4|A0A553SGN4_NIACIPhosphoribosylamine--glycineligaseOS=NialliacirculansOX=1397GN=purDPE=3SV=1	tr|A0A553SGN4|A0A553SGN4_NIACIPhosphoribosylamine--glycineligaseOS=NialliacirculansOX=1397GN=purDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7525207400322	2	435.750193	869.485833	2.3162	0.0010093	2.4835	0.0010822	4.7997	0.0020915	435.7511277312858	63.625	0.67478	63.954	63.598	64.273	0.32899					54	21	3	0	0	0	0.7849	1	26600	26600		3.9444	0.3479	1	5760800			492	16113	279	282	615	615					0.045869801488947815
AILASIIVSIH	11	Unmodified	_AILASIIVSIH_					0	0	0			REV__ENSG00000115665|ENST00000264047|SLC5A7	REV__ENSG00000115665|ENST00000264047|SLC5A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.5721008181572	3	379.572775	1135.69649	1.6763	0.00063626	-3.4417	-0.0013064	-1.7654	-0.0006701	379.57139342546265	77.907	0.92838	79.188	78.507	79.435	1.2809					55	29	2	0	0	0	1.0362	1	32717	32717		1.3296	0.1363	1	1756700	+		493	9448	280	283	616	616					0.1340743747093711
AILCKKVYK	9	Unmodified	_AILCKKVYK_					0	0	0			REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1065.656665027142	1	1065.6489	1064.64162	3.4124	0.0036364	3.0861	0.0032887	6.4984	0.0069251	1065.6517574527256	107.58	0.17154	107.63	107.54	107.71	0.052452					24	8	4	0	0	0	0.84963	1	46037	46037		0.6015	0.14316	1	185710000	+		494	8888	281	284	617	617					0.11188727398666742
AILCKKVYK	9	Unmodified	_AILCKKVYK_					0	0	0			REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1065.6489	1064.64162	1.2928	0.0013776	4.4987	0.0047941	5.7915	0.0061717	1065.6540352812615	107.61	0.1733	107.61	107.53	107.7	0	-0.0082038	0.00076739	NaN	0.6015	21	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33402000	+		495	8888	281	284							0.11188727398666742
AILCKKVYK	9	Unmodified	_AILCKKVYK_					0	0	0			REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	REV__ENST00000374089.5_1_1:27426800-27429818:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1065.6489	1064.64162	3.4124	0.0036364	3.0861	0.0032887	6.4984	0.0069251	1065.6517574527256	107.58	0.17154	107.63	107.54	107.71	0.052452	0.0082038	-0.00073802	NaN	0.6015	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185710000	+		496	8888	281	284							0.11188727398666742
AILDTLYEV	9	Unmodified	_AILDTLYEV_					0	0	0		ENSG00000106086|ENST00000449726|PLEKHA8	ENSG00000106086|ENST00000449726|PLEKHA8	ENSG00000106086|ENST00000449726|PLEKHA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1036.554248034954	1	1036.5561	1035.54883	1.7683	0.001833	-0.98927	-0.0010254	0.77904	0.00080752	1036.5551119796448	72.868	0.28022	72.868	72.684	72.964	0					13	8	2	0	0	0	0.11478	1	30354	30354		44.407	10.305	1	647270			497	1555	282	285	618	618					0.03247501146279319
AILDTLYEV	9	Unmodified	_AILDTLYEV_					0	0	0		ENSG00000106086|ENST00000449726|PLEKHA8	ENSG00000106086|ENST00000449726|PLEKHA8	ENSG00000106086|ENST00000449726|PLEKHA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1036.559374988079	1	1036.5561	1035.54883	2.4188	0.0025072	1.1137	0.0011544	3.5324	0.0036616	1036.5569541141276	72.477	0.27858	72.802	72.611	72.889	0.32494					15	8	2	0	0	0	0.09539	1	30314	30314		50.855	14.811	1	462300			498	1555	282	285	619	619					0.03247501146279319
AILDTVVQSLK	11	Unmodified	_AILDTVVQSLK_					0	0	0		tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.8571044802666	2	593.855721	1185.69689	1.9466	0.001156	0.50151	0.00029782	2.4482	0.0014539	593.8560166336911	38.778	0.21315	40.074	39.919	40.132	1.2961					14	6	3	0	0	0	0.12236	1	16268	16268		47.594	1.8545	1	1684200			499	16599	283	286	620	620					0.11146812400124873
AILDTVVQSLK	11	Unmodified	_AILDTVVQSLK_					0	0	0		tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.8561279177666	2	593.855721	1185.69689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.154	1	39.974	39.474	40.474	1.8202								0	0	0	0.56273	1	16006	16006		22.658	0	1				500	16599	283	286	621	621					0.11146812400124873
AILKNSDII	9	Unmodified	_AILKNSDII_					0	0	0		tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5951415896416	1	986.588073	985.580796	5.8999	0.0058208	-0.52813	-0.00052105	5.3718	0.0052997	986.5872730995478	87.69	0.4364	88.782	88.553	88.99	1.0918					27	13	3	0	0	0	0.20671	1	37011	37011		32.305	0	1	9405200			501	16352	284	287	622	622					0.08742913620085346
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7933532595634	2	504.78985	1007.56515	4.9947	0.0025213	3.0493	0.0015393	8.044	0.0040605	504.7911886328887	87.655	0.37266	88.747	88.553	88.926	1.0918					29	11	4	0	0	0	0.24063	1	37006	37006		28.487	5.3384	1	2478900	+		502	10281	285	288	623	623					0.06166627103038991
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.7760803103447	2	504.78985	1007.56515	4.9947	0.0025213	3.0493	0.0015393	8.044	0.0040605	504.7911886328887	87.655	0.37266	88.747	88.553	88.926	1.0918					29	11	4	0	0	0	0.10844	1	36888	36888		11.64	3.7301	1	2478900	+		503	10281	285	288	624	624					0.06166627103038991
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7926818728447	2	504.78985	1007.56515	4.5705	0.0023072	1.5218	0.00076821	6.0924	0.0030754	504.7904719299613	87.192	0.36916	88.687	88.518	88.888	1.4953					27	11	3	0	0	0	0.1735	2	36785	36732;36785		36.044	6.9626	1	2520400	+		504	10281	285	288	625;626	626					0.06166627103038991
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	504.78985	1007.56515	2.515	0.0012696	2.3763	0.0011995	4.8913	0.0024691	504.79066138844536	88.995	0.35111	88.995	88.795	89.146	0	0.19966	0.00010303	NaN	36.044	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	429140	+		505	10281	285	288							0.06166627103038991
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	504.78985	1007.56515	3.0122	0.0015205	2.1905	0.0011058	5.2028	0.0026263	504.7907736242265	88.519	0.38374	88.753	88.598	88.982	0.2347	-0.04239	-8.4511E-05	NaN	36.044	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	844150	+		506	10281	285	288							0.06166627103038991
AILLEEHAL	9	Unmodified	_AILLEEHAL_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	504.78985	1007.56515	4.5705	0.0023072	1.5218	0.00076821	6.0924	0.0030754	504.7904719299613	87.192	0.36916	88.687	88.518	88.888	1.4953	-0.10845	-0.00075962	NaN	36.044	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2520400	+		507	10281	285	288							0.06166627103038991
AILLSPSTKG	10	Unmodified	_AILLSPSTKG_					0	0	0			REV__tr|A0A553SR86|A0A553SR86_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_00630PE=3SV=1	REV__tr|A0A553SR86|A0A553SR86_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_00630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5930053591728	1	986.588073	985.580796	5.8999	0.0058208	-0.52813	-0.00052105	5.3718	0.0052997	986.5872730995478	87.69	0.4364	88.782	88.553	88.99	1.0918					27	13	3	0	0	0	0.22673	1	36972	36972		45.7	13.394	1	9405200	+		508	15149	286	289	627	627					0.08742913620108084
AILLSTRWAR	10	Unmodified	_AILLSTRWAR_					0	0	0			REV__nc|ENSG00000292332|P26951-2|IL3RA	REV__nc|ENSG00000292332|P26951-2|IL3RA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2406494021416	3	396.240018	1185.69823	1.7346	0.00068733	-0.60867	-0.00024118	1.126	0.00044615	396.2401691637955	40.242	0.31476	40.555	40.35	40.665	0.31263					23	9	3	0	0	0	0.67383	1	16934	16934		19.626	3.0601	1	3158200	+		509	11458	287	290	628	628					0.11280491279558191
AILLSTRWAR	10	Unmodified	_AILLSTRWAR_					0	0	0			REV__nc|ENSG00000292332|P26951-2|IL3RA	REV__nc|ENSG00000292332|P26951-2|IL3RA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2403747439384	3	396.240018	1185.69823	1.3942	0.00055246	-1.8577	-0.00073608	-0.46343	-0.00018363	396.23938295377644	38.792	0.30174	40.088	39.895	40.197	1.2961					22	9	3	0	0	0	0.55892	1	16292	16292		24.882	4.0104	1	5213700	+		510	11458	287	290	629	629					0.11280491279558191
AILPNRVV	8	Unmodified	_AILPNRVV_					0	0	0			REV__ENSG00000100249|ENST00000216071|C22orf31	REV__ENSG00000100249|ENST00000216071|C22orf31	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2822143435478	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.466	1	43.466	42.966	43.966	0								0	0	0	1.0178	1	18196	18196		9.3474	0	1		+		511	8977	288	291	630	630					0.10438385376664883
AILRQWVP	8	Unmodified	_AILRQWVP_					0	0	0		nc|ENSG00000115295|Q8N3C7-3|CLIP4;nc|ENSG00000115295|Q8N3C7-2|CLIP4;ENSG00000115295|ENST00000320081|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7984802126884	2	491.795269	981.575986	1.1906	0.00058554	2.4774	0.0012184	3.668	0.0018039	491.79616695175866	33.464	0.37298	33.464	33.265	33.638	0					25	11	3	0	0	0	0.89051	1	13968	13968		2.3027	0.24298	1	3066900			512	1911	289	292	631	631					0.08446074267988024
AILSLEAPVL	10	Unmodified	_AILSLEAPVL_					0	0	0		tr|A0A553SPF0|A0A553SPF0_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_26200PE=4SV=1	tr|A0A553SPF0|A0A553SPF0_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_26200PE=4SV=1	tr|A0A553SPF0|A0A553SPF0_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_26200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.8162109255791	2	513.3157	1024.61685	2.526	0.0012966	-1.1016	-0.00056547	1.4244	0.00073114	513.815510640938	64.508	0.50797	66.437	66.139	66.647	1.928					31	15	3	0	0	0	0.51515	1	27043	27043		26.884	0	1	1802400			513	16464	290	293	632	632					0.1055237079692688
AILTELKSI	9	Unmodified	_AILTELKSI_					0	0	0		nc|ENSG00000151718|Q6AWC2-2|WWC2;ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2;nc|ENSG00000151718|Q6AWC2-5|WWC2;nc|ENSG00000151718|Q6AWC2-4|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3115112185478	2	494.307875	986.601197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.323	1	40.619	40.119	41.119	1.2961								0	0	0	0.10193	1	16495	16495		34.102	12.356	1				514	3298	291	294	633	633					0.10736084279892566
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(63)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3065368533134	2	509.304278	1016.594	2.2118	0.0011265	0.28126	0.00014324	2.4931	0.0012697	509.30447496417764	51.668	0.43966	51.668	51.478	51.917	0					20	13	2	0	0	0	0.063746	2	21522	21522;21577		62.573	31.936	1	1566800			515	443	292	295	634;635	634		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(63)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3050720095634	2	509.304278	1016.594	2.1959	0.0011184	0.06761	3.4434E-05	2.2635	0.0011528	509.3042939153768	52.334	0.37843	52.334	52.13	52.508	0					15	11	2	0	0	0	0.063746	1	21834	21834		62.573	31.936	1	1584400			516	443	292	295	636	636		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(54)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3063537478447	2	509.304278	1016.594	1.9215	0.00097865	1.5932	0.00081142	3.5147	0.0017901	509.3050189892849	51.168	0.34352	51.496	51.354	51.698	0.32824					15	10	2	0	0	0	0.086433	2	21417	21417;21468		53.833	29.812	1	1350400			517	443	292	295	637;638	637		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(54)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3049499392509	2	509.304278	1016.594	1.9179	0.00097682	1.1392	0.00058018	3.0571	0.001557	509.30496313176377	51.761	0.24796	52.086	51.943	52.191	0.32553					13	7	2	0	0	0	0.086433	1	21663	21663		53.833	29.812	1	1626800			518	443	292	295	639	639		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(63)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3064147830009	2	509.304278	1016.594	2.6605	0.001355	1.458	0.00074258	4.1185	0.0020976	509.3050601764621	50.474	0.46582	51.868	51.551	52.016	1.3938					23	14	2	0	0	0	0.063746	1	21127	21127		62.573	31.936	1	1147700			519	443	292	295	640	640		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_		AIM(1)DIVIKV		AIM(48)DIVIKV	0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3060790896416	2	509.304278	1016.594	1.8679	0.00095135	2.3722	0.0012082	4.2401	0.0021595	509.3058773530823	49.955	0.28121	51.933	51.758	52.039	1.9772					18	8	3	0	0	0	0.10473	1	20931	20931		47.749	28.492	1	924810			520	443	292	295	641	641		3			0.08637028407827074
AIMDIVIKV	9	Oxidation (M)	_AIM(Oxidation (M))DIVIKV_					0	0	1		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	509.304278	1016.594	2.8001	0.0014261	0.61739	0.00031444	3.4174	0.0017405	509.3052200325816	49.906	0.22108	51.297	51.166	51.387	1.3911	-0.1359	-0.0004492	NaN	62.573	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781170			521	443	292	295				3			0.08637028407827074
AIMDIVIKV	9	Unmodified	_AIMDIVIKV_					0	0	0		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3085815310478	2	501.306821	1000.59909	1.5749	0.00078953	2.0441	0.0010247	3.619	0.0018142	501.3081568916653	68.315	0.62936	68.315	68.107	68.737	0					55	19	4	0	0	0	0.031377	6	28438	28400;28438;28477;28518;28559;28615		85.272	52.967	1	7371100			522	443	292	296	642;643;644;645;646;647	643					0.09881332270435905
AIMDIVIKV	9	Unmodified	_AIMDIVIKV_					0	0	0		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3102599978447	2	501.306821	1000.59909	2.2222	0.001114	2.4658	0.0012361	4.688	0.0023501	501.30835166145374	67.812	0.4469	68.135	67.931	68.378	0.32269					42	13	4	0	0	0	0.04812	3	28343	28343;28393;28434		69.105	40.023	1	8274900			523	443	292	296	648;649;650	648					0.09881332270435905
AIMDIVIKV	9	Unmodified	_AIMDIVIKV_					0	0	0		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3068115115166	2	501.306821	1000.59909	2.1697	0.0010877	-2.1798	-0.0010927	-0.010049	-5.0375E-06	501.30678948040577	68.143	0.18882	68.466	68.346	68.534	0.32269					7	5	2	0	0	0	0.18809	1	28494	28494		34.402	19.563	1	843370			524	443	292	296	651	651					0.09881332270435905
AIMDIVIKV	9	Unmodified	_AIMDIVIKV_					0	0	0		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3086425662041	2	501.306821	1000.59909	1.9731	0.00098914	1.9506	0.00097783	3.9237	0.001967	501.3081541436618	66.528	0.46466	67.917	67.719	68.184	1.3888					44	14	4	0	0	0	0.04812	3	27911	27865;27911;27951		69.105	36.799	1	16341000			525	443	292	296	652;653;654	653					0.09881332270435905
AIMDIVIKV	9	Unmodified	_AIMDIVIKV_					0	0	0		EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3088256716728	2	501.306821	1000.59909	1.4689	0.00073636	2.6459	0.0013264	4.1148	0.0020628	501.3085544636547	66.09	0.53022	67.979	67.779	68.309	1.8889					47	16	4	0	0	0	0.04812	4	27728	27677;27728;27767;27825		69.105	38.351	1	15426000			526	443	292	296	655;656;657;658	656					0.09881332270435905
AINPKLLQL	9	Unmodified	_AINPKLLQL_					0	0	0		DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000581230.5_1_17:62496043-62497015:-|nuORF;nc|ENSG00000108654|P17844-2|DDX5	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3233215212822	2	505.32386	1008.63317	-0.36015	-0.00018199	-1.1778	-0.00059519	-1.538	-0.00077718	505.32323964440417	50.962	0.17886	52.937	52.788	52.967	1.9753					10	5	2	0	0	0	0.059546	1	21360	21360		64.236	30.134	1	1766900			527	400	293	297	659	659					0.12919496753715976
AINPYLAY	8	Unmodified	_AINPYLAY_					0	0	0		tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1;tr|A0A553SMP5|A0A553SMP5_NIACIGlutamatesynthaselargesubunitOS=NialliacirculansOX=1397GN=CEQ21_22985PE=3SV=1	tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	924.4924804568291	1	924.482545	923.475269	2.0148	0.0018627	4.3439	0.0040159	6.3587	0.0058785	924.4867154757198	60.312	0.36702	60.312	60.174	60.541	0					20	11	2	0	0	0	0.68174	1	25187	25187		32.117	3.9437	1	793010			528	17227	294	298	660	660					0.010469974944612659
AINSSSLNFL	10	Unmodified	_AINSSSLNFL_					0	0	0			REV__nc|ENSG00000132321|Q86XH1-2|IQCA1	REV__nc|ENSG00000132321|Q86XH1-2|IQCA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1913940310478	2	533.282389	1064.55022	1.6132	0.0008603	0.31109	0.0001659	1.9243	0.0010262	533.2820039202581	71.091	0.35059	71.415	71.239	71.59	0.32359					23	10	3	0	0	0	0.12513	1	29785	29785		7.9102	1.5561	1	1665500	+		529	9844	295	299	661	661					0.020531352350417365
AIPFIRPLR	9	Unmodified	_AIPFIRPLR_					0	0	0		nc|ENSG00000172795|Q8IU60-2|DCP2;ENSG00000172795|ENST00000389063|DCP2;ENST00000512751.5_1_5:112312677-112343644:+|nuORF;ENST00000508359.1_1_5:112336867-112343781:+|nuORF	nc|ENSG00000172795|Q8IU60-2|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.8454467654228	2	541.845294	1081.67603	2.7673	0.0014994	-3.4593	-0.0018744	-0.69201	-0.00037496	541.8434019045586	107.58	0.2484	107.63	107.52	107.77	0.052452					31	12	4	0	0	0	0.83213	1	46038	46038		2.0598	0	1	151570000			530	4252	296	300	662	662					0.13846311601764683
AIPGQDSSQA	10	Unmodified	_AIPGQDSSQA_					0	0	0			REV__nc|ENSG00000170011|Q8NFW9-5|MYRIP	REV__nc|ENSG00000170011|Q8NFW9-5|MYRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2342407107353	2	487.232896	972.451239	2.8626	0.0013947	-1.4197	-0.00069173	1.4429	0.00070302	487.2318696437928	72.976	0.22318	73.3	73.179	73.403	0.32494					12	6	2	0	0	0	0.88579	1	30560	30560		2.9952	0.10602	1	455420	+		531	10972	297	301	663	663					-0.036088877298539046
AIPLSMLRI	9	Unmodified	_AIPLSMLRI_					0	0	0			REV__nc|nan|Q6UWU4-2|C6orf89	REV__nc|nan|Q6UWU4-2|C6orf89	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3128539919853	2	507.312438	1012.61032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.688	1	88.78	88.28	89.28	1.0918								0	0	0	0.39421	1	36982	36982		9.3474	0	1		+		532	11722	298	302	664	664					0.10452154364577382
AIQDKLFQV	9	Unmodified	_AIQDKLFQV_					0	0	0		ENST00000514908.5_1_3:126423131-126653948:+|nuORF;ENSG00000159685|ENST00000290913|CHCHD6	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.3044311404228	2	531.303124	1060.5917	2.0704	0.0011	-0.131	-6.9601E-05	1.9394	0.0010304	531.3031044096489	49.436	0.33968	49.436	49.253	49.593	0					27	10	3	0	0	0	0.019071	1	20638	20638		100.09	30.986	1	2885700			533	3537	299	303	665	665					0.06382315994369492
AIQDKLFQV	9	Unmodified	_AIQDKLFQV_					0	0	0		ENST00000514908.5_1_3:126423131-126653948:+|nuORF;ENSG00000159685|ENST00000290913|CHCHD6	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3044311404228	2	531.303124	1060.5917	2.4368	0.0012947	-0.63707	-0.00033848	1.7998	0.00095623	531.3026983400161	47.502	0.72788	48.884	48.663	49.391	1.3825					44	22	3	0	0	0	0.0060384	3	19847	19847;19883;19923		118.07	39.34	1	6752200			534	3537	299	303	666;667;668	666					0.06382315994369492
AIQDKLFQV	9	Unmodified	_AIQDKLFQV_					0	0	0		ENST00000514908.5_1_3:126423131-126653948:+|nuORF;ENSG00000159685|ENST00000290913|CHCHD6	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3041869997978	2	531.303124	1060.5917	2.5279	0.0013431	-0.22862	-0.00012147	2.2993	0.0012216	531.3030871417154	47.023	0.44028	48.999	48.777	49.217	1.976					33	13	3	0	0	0	0.0080484	2	19715	19667;19715		110.55	28.663	1	6267200			535	3537	299	303	669;670	670					0.06382315994369492
AIQDKLFQV	9	Unmodified	_AIQDKLFQV_					0	0	0		ENST00000514908.5_1_3:126423131-126653948:+|nuORF;ENSG00000159685|ENST00000290913|CHCHD6	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	ENST00000514908.5_1_3:126423131-126653948:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.303124	1060.5917	1.8522	0.00098406	0.40318	0.00021421	2.2553	0.0011983	531.3032370950561	48.932	0.56203	49.263	48.852	49.414	0.33024	-0.086555	0.00035448	NaN	100.09	35	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3121600			536	3537	299	303							0.06382315994369492
AIRLGAEMAI	10	Unmodified	_AIRLGAEMAI_					0	0	0			REV__nc|ENSG00000135870|Q5TC82-2|RC3H1	REV__nc|ENSG00000135870|Q5TC82-2|RC3H1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7969848513603	2	522.797152	1043.57975	1.6756	0.00087599	-2.2708	-0.0011872	-0.5952	-0.00031117	522.796182237758	42.399	0.37412	44.32	44.041	44.416	1.9211					24	11	3	0	0	0	0.28892	1	17744	17744		39.957	3.8303	1	3308000	+		537	9957	300	304	671	671					0.05970375979518394
AIRLNEWYEK	10	Unmodified	_AIRLNEWYEK_					0	0	0			REV__ENSG00000145692|ENST00000274353|BHMT	REV__ENSG00000145692|ENST00000274353|BHMT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2349731326103	3	441.234822	1320.68264	1.4378	0.0006344	0.64126	0.00028294	2.079	0.00091735	441.2347994794269	94.395	0.30379	94.395	94.244	94.547	0					23	9	3	0	0	0	0.89803	1	39494	39494		0.62683	0.17231	1	1603100	+		538	10279	301	305	672	672					0.035121599718195284
AISDFYYTV	9	Unmodified	_AISDFYYTV_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1078.507861316204	1	1078.50915	1077.50188	3.3048	0.0035642	-1.1119	-0.0011992	2.1929	0.002365	1078.5063554415146	60.827	0.21328	62.792	62.637	62.85	1.9653					10	6	2	0	0	0	0.27148	1	25527	25527		26.884	8.7373	1	645690			539	3620	302	306	673	673					-0.03377358404873121
AISDFYYTV	9	Unmodified	_AISDFYYTV_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1078.50915	1077.50188	3.1601	0.0034082	-1.2564	-0.0013551	1.9037	0.0020531	1078.507115091419	61.263	0.21071	62.68	62.563	62.774	1.4177	-0.055923	-6.5773E-05	NaN	26.884	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	905460			540	3620	302	306							-0.03377358404873121
AISGIIMGI	9	Oxidation (M)	_AISGIIM(Oxidation (M))GI_		AISGIIM(1)GI		AISGIIM(64)GI	0	0	1		ENSG00000105370|ENST00000596399|LIM2;nc|ENSG00000105370|P55344-2|LIM2	ENSG00000105370|ENST00000596399|LIM2	ENSG00000105370|ENST00000596399|LIM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	890.5033447146416	1	890.501566	889.494289	1.7221	0.0015335	0.7666	0.00068265	2.4887	0.0022162	890.5021383195678	65.508	0.38651	65.508	65.289	65.676	0					21	11	2	0	0	0	0.061246	1	27300	27300		63.563	7.0216	1	1104200			541	1513	303	307	674	674		26			0.04512210793905069
AISGIIMGI	9	Oxidation (M)	_AISGIIM(Oxidation (M))GI_		AISGIIM(1)GI		AISGIIM(64)GI	0	0	1		ENSG00000105370|ENST00000596399|LIM2;nc|ENSG00000105370|P55344-2|LIM2	ENSG00000105370|ENST00000596399|LIM2	ENSG00000105370|ENST00000596399|LIM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	890.5061523318291	1	890.501566	889.494289	1.9749	0.0017587	0.094999	8.4597E-05	2.0699	0.0018433	890.5016444771717	64.938	0.35403	65.265	65.131	65.485	0.32689					19	10	2	0	0	0	0.061246	1	27186	27186		63.563	7.0216	1	1034300			542	1513	303	307	675	675		26			0.04512210793905069
AISPAQLARRQ	11	Unmodified	_AISPAQLARRQ_					0	0	0		ENST00000581549.1_1_17:70599690-70599849:-|nuORF	ENST00000581549.1_1_17:70599690-70599849:-|nuORF	ENST00000581549.1_1_17:70599690-70599849:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1210.704394519329	1	1210.70148	1209.6942	1.692	0.0020485	2.7773	0.0033624	4.4693	0.005411	1210.7037118970666	69.978	0.25296	69.978	69.834	70.087	0					16	7	3	0	0	0	0.92747	1	29134	29134		8.1555	0.54658	1	748460			543	7436	304	308	676	676					0.09774401785830378
AITEPFHAL	9	Unmodified	_AITEPFHAL_					0	0	0			REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000142627|ENST00000358432|EPHA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7697326540947	2	499.768917	997.523281	0.78356	0.0003916	0.90176	0.00045067	1.6853	0.00084227	499.76934460646004	38.139	0.37352	39.959	39.788	40.162	1.8202					25	11	3	0	0	0	0.64949	1	16019	16019		9.3474	0	1	2132700	+		544	10185	305	309	677	677					0.024420714145321654
AITEPFHAL	9	Unmodified	_AITEPFHAL_					0	0	0			REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000142627|ENST00000358432|EPHA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	499.768917	997.523281	1.5499	0.0007746	1.1416	0.00057054	2.6915	0.0013451	499.7693548262144	40.282	0.22665	40.282	40.169	40.396	0	0.17159	0.00058536	NaN	9.3474	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590350	+		545	10185	305	309							0.024420714145321654
AITEPFHAL	9	Unmodified	_AITEPFHAL_					0	0	0			REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000142627|ENST00000358432|EPHA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	499.768917	997.523281	2.2512	0.0011251	1.3386	0.00066901	3.5899	0.0017941	499.7701608186503	39.877	0.23725	40.189	40.05	40.288	0.31263	0.079564	0.00078231	NaN	9.3474	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388700	+		546	10185	305	309							0.024420714145321654
AITEPFHAL	9	Unmodified	_AITEPFHAL_					0	0	0			REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000142627|ENST00000358432|EPHA2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	499.768917	997.523281	1.86	0.00092955	-0.41572	-0.00020776	1.4442	0.00072178	499.7688186204575	38.713	0.29631	40.009	39.836	40.132	1.2961	-0.10059	-0.00097124	NaN	9.3474	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2322600	+		547	10185	305	309							0.024420714145321654
AITEPFHAL	9	Unmodified	_AITEPFHAL_					0	0	0			REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000142627|ENST00000358432|EPHA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.768917	997.523281	0.78356	0.0003916	0.90176	0.00045067	1.6853	0.00084227	499.76934460646004	38.139	0.37352	39.959	39.788	40.162	1.8202	-0.15057	0.00034563	NaN	9.3474	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2132700	+		548	10185	305	309							0.024420714145321654
AIVDKVPSV	9	Unmodified	_AIVDKVPSV_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.2799255251884	2	464.279118	926.543683	1.9907	0.00092425	-0.64491	-0.00029942	1.3458	0.00062483	464.2786960975688	33.665	0.59142	33.962	33.554	34.145	0.29701					33	19	2	0	0	0	0.25667	1	14150	14150		27.629	7.1752	1	1688700			549	4586	306	310	678	678					0.07747242074333371
AIVDKVPSV	9	Unmodified	_AIVDKVPSV_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.2790405154228	2	464.279118	926.543683	0.79329	0.00036831	-0.34704	-0.00016112	0.44625	0.00020719	464.27896713423604	32.545	0.58971	33.823	33.411	34.001	1.2782					44	19	3	0	0	0	0.036104	3	13647	13601;13647;13689		79.596	33.575	1	4672300			550	4586	306	310	679;680;681	680					0.07747242074333371
AIVDKVPSV	9	Unmodified	_AIVDKVPSV_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2802307009697	2	464.279118	926.543683	1.1466	0.00053233	-0.36809	-0.0001709	0.77848	0.00036143	464.2788358954274	32.042	0.7307	33.867	33.302	34.033	1.8246					54	27	3	0	0	0	0.060242	3	13374	13330;13374;13422		63.961	31.655	1	4025700			551	4586	306	310	682;683;684	683					0.07747242074333371
AIVDKVPSV	9	Unmodified	_AIVDKVPSV_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	464.279118	926.543683	1.7377	0.00080679	-0.89855	-0.00041718	0.83918	0.00038961	464.27856708760703	34.119	0.57673	34.119	33.731	34.308	0	0.17604	-0.00031349	NaN	79.596	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1544400			552	4586	306	310							0.07747242074333371
AIVMLVHM	8	Unmodified	_AIVMLVHM_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|4|1|sense;Harlequin-int_dup206|chr5:139527817-139528355:+|3.175785272454588|0.0887483034314105|5.16|423.0|7|2|sense;Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|89|3|sense;Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|44|2|sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|4|1|sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	305.1711913943291	3	305.171448	912.492515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.59	1	103.76	103.26	104.26	0.1731								0	0	0	1.0178	1	43653	43653		0.45834	0	1				553	7595	307	311	685	685					0.03276878504289016
AIVMTWNYM	9	Unmodified	_AIVMTWNYM_					0	0	0			REV__ENSG00000198515|ENST00000514170|CNGA1	REV__ENSG00000198515|ENST00000514170|CNGA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7655517458916	2	564.764463	1127.51437	2.7062	0.0015284	-0.97985	-0.00055338	1.7263	0.00097497	564.7640198738646	80.011	0.30808	81.263	81.109	81.417	1.2512					24	9	3	0	0	0	0.44535	2	33574	33574;33624		18.135	2.2878	1	1867100	+		554	11714	308	312	686;687	686					-0.044283615378390095
AIVMTWNYM	9	Unmodified	_AIVMTWNYM_					0	0	0			REV__ENSG00000198515|ENST00000514170|CNGA1	REV__ENSG00000198515|ENST00000514170|CNGA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7639037966728	2	564.764463	1127.51437	1.5885	0.00089712	-0.82823	-0.00046775	0.76026	0.00042937	564.7641024442239	79.563	0.30725	81.279	81.106	81.413	1.7167					24	9	3	0	0	0	0.49082	1	33352	33352		15.847	1.9411	1	1598400	+		555	11714	308	312	688	688					-0.044283615378390095
AIVMTWNYM	9	Unmodified	_AIVMTWNYM_					0	0	0			REV__ENSG00000198515|ENST00000514170|CNGA1	REV__ENSG00000198515|ENST00000514170|CNGA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	564.764463	1127.51437	2.7062	0.0015284	-0.97985	-0.00055338	1.7263	0.00097497	564.7640198738646	80.011	0.30808	81.263	81.109	81.417	1.2512	-0.008383	-8.3651E-05	NaN	18.135	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1867100	+		556	11714	308	312							-0.044283615378390095
AIVMTWNYM	9	Unmodified	_AIVMTWNYM_					0	0	0			REV__ENSG00000198515|ENST00000514170|CNGA1	REV__ENSG00000198515|ENST00000514170|CNGA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	564.764463	1127.51437	1.5885	0.00089712	-0.82823	-0.00046775	0.76026	0.00042937	564.7641024442239	79.563	0.30725	81.279	81.106	81.413	1.7167	0.008383	8.7611E-05	NaN	18.135	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1598400	+		557	11714	308	312							-0.044283615378390095
AIVNGEEINL	10	Unmodified	_AIVNGEEINL_					0	0	0			REV__tr|A0A7D6VVF8|A0A7D6VVF8_9CLOT4-hydroxy-3-methylbut-2-enyldiphosphatereductaseOS=ClostridiumintestinaleOX=36845GN=ispHPE=3SV=1	REV__tr|A0A7D6VVF8|A0A7D6VVF8_9CLOT4-hydroxy-3-methylbut-2-enyldiphosphatereductaseOS=ClostridiumintestinaleOX=36845GN=ispHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2892333865166	2	536.287671	1070.56079	3.1957	0.0017138	1.2014	0.00064429	4.3971	0.0023581	536.2883920081732	74.889	0.34478	76.195	75.966	76.311	1.3063					22	10	3	0	0	0	0.28905	2	31403	31403;31458		39.95	1.9757	1	2343100	+		558	15529	309	313	689;690	689					0.028331178894632103
AIWFYTNS	8	Unmodified	_AIWFYTNS_					0	0	0		ENST00000505104.5_1_4:9882098-10027590:-|nuORF;nc|ENSG00000109667|Q9NRM0-2|SLC2A9;ENSG00000109667|ENST00000264784|SLC2A9	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	ENST00000505104.5_1_4:9882098-10027590:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2381164431572	2	501.239993	1000.46543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.32	1	97.32	96.82	97.82	0								0	0	0	1.0178	1	40687	40687		2.8892	0.31174	1				559	1671	310	314	691	691					-0.03478190510918466
AIWKELISL	9	Unmodified	_AIWKELISL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.8248168826103	2	536.823692	1071.63283	2.3715	0.0012731	0.58343	0.0003132	2.955	0.0015863	536.8238332359275	73.551	0.38102	73.876	73.692	74.073	0.32494					23	11	3	0	0	0	0.086433	1	30762	30762		53.833	9.4258	1	1844800			560	1001	311	315	692	692					0.09988077033858644
AIWKELISL	9	Unmodified	_AIWKELISL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8245727419853	2	536.823692	1071.63283	2.851	0.0015305	-0.2125	-0.00011408	2.6385	0.0014164	536.8232365964967	72.387	0.55055	73.717	73.518	74.069	1.3297					36	17	3	0	0	0	0.031145	2	30365	30365;30413		85.642	17.561	1	4230700			561	1001	311	315	693;694	693					0.09988077033858644
AIWKELISL	9	Unmodified	_AIWKELISL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8252441287041	2	536.823692	1071.63283	2.7027	0.0014509	0.47947	0.00025739	3.1821	0.0017082	536.8236374549077	71.941	0.48752	73.765	73.507	73.995	1.824					28	15	3	0	0	0	0.036104	2	30188	30135;30188		79.596	8.4627	1	4528700			562	1001	311	315	695;696	696					0.09988077033858644
AIWKELISL	9	Unmodified	_AIWKELISL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	536.823692	1071.63283	1.7221	0.00092448	0.90346	0.000485	2.6256	0.0014095	536.823824284232	74.121	0.3824	74.121	73.952	74.334	0	0.25175	0.00050282	NaN	85.642	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1781300			563	1001	311	315							0.09988077033858644
AKAGTHIA	8	Unmodified	_AKAGTHIA_					0	0	0			REV__nc|ENSG00000103495|P56270-3|MAZ	REV__nc|ENSG00000103495|P56270-3|MAZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	768.4379150271416	1	768.436264	767.428987	2.7899	0.0021439	1.0416	0.0008004	3.8315	0.0029443	768.436109988403	104.42	0.22926	104.59	104.47	104.7	0.1731					23	11	3	0	0	0	0.88663	1	44181	44181		4.756	0	1	16722000	+		564	9109	312	316	697	697					0.035969773830515805
AKAGTHIA	8	Unmodified	_AKAGTHIA_					0	0	0			REV__nc|ENSG00000103495|P56270-3|MAZ	REV__nc|ENSG00000103495|P56270-3|MAZ	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	768.436264	767.428987	1.3284	0.0010208	4.9837	0.0038297	6.3121	0.0048504	768.43832238353	104.52	0.16866	104.52	104.44	104.6	0	-0.050854	0.0020638	NaN	4.756	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8431600	+		565	9109	312	316							0.035969773830515805
AKAGTHIA	8	Unmodified	_AKAGTHIA_					0	0	0			REV__nc|ENSG00000103495|P56270-3|MAZ	REV__nc|ENSG00000103495|P56270-3|MAZ	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	768.436264	767.428987	2.7357	0.0021022	2.9897	0.0022974	5.7253	0.0043996	768.4378356998274	104.48	0.20352	104.54	104.42	104.62	0.056801	-0.027476	0.00053154	NaN	4.756	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8045300	+		566	9109	312	316							0.035969773830515805
AKAGTHIA	8	Unmodified	_AKAGTHIA_					0	0	0			REV__nc|ENSG00000103495|P56270-3|MAZ	REV__nc|ENSG00000103495|P56270-3|MAZ	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	768.436264	767.428987	2.5568	0.0019647	2.5342	0.0019474	5.091	0.0039121	768.4373050376679	104.46	0.18761	104.62	104.53	104.71	0.16055	0.055883	0.00018154	NaN	4.756	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14786000	+		567	9109	312	316							0.035969773830515805
AKAGTHIA	8	Unmodified	_AKAGTHIA_					0	0	0			REV__nc|ENSG00000103495|P56270-3|MAZ	REV__nc|ENSG00000103495|P56270-3|MAZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	768.436264	767.428987	2.7899	0.0021439	1.0416	0.0008004	3.8315	0.0029443	768.436109988403	104.42	0.22926	104.59	104.47	104.7	0.1731	0.022447	-0.00096544	NaN	4.756	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16722000	+		568	9109	312	316							0.035969773830515805
AKAMPPLRA	9	Unmodified	_AKAMPPLRA_					0	0	0			REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.2279235720634	3	318.856629	953.548056	0.11517	3.6721E-05	-1.3164	-0.00041974	-1.2012	-0.00038302	318.85598286655204	23.943	0.33917	24.185	23.949	24.288	0.24252					18	10	2	0	0	0	0.11944	1	9973	9973		0.20686	0	1	283290	+		569	13392	313	317	698	698					0.0694242801623659
AKAMPPLRA	9	Unmodified	_AKAMPPLRA_					0	0	0			REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	318.856629	953.548056	-0.060245	-1.921E-05	-0.3491	-0.00011131	-0.40934	-0.00013052	318.8562121196602	22.804	0.30712	24.018	23.859	24.166	1.2145	-0.083661	0.0006227	NaN	0.20686	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303270	+		570	13392	313	317							0.0694242801623659
AKAPLFLHL	9	Unmodified	_AKAPLFLHL_					0	0	0			REV__ENST00000257177.8_1_1:52940808-52940859:-|nuORF	REV__ENST00000257177.8_1_1:52940808-52940859:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3129150271416	2	505.313295	1008.61204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.836	1	33.117	32.617	33.617	1.2813								0	0	0	0.40883	1	13355	13355		7.9102	1.187	1		+		571	12169	314	318	699	699					0.10807531444845608
AKARTHFV	8	Unmodified	_AKARTHFV_					0	0	0		ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2736083865166	2	465.269419	928.524284	2.0631	0.00095988	2.4255	0.0011285	4.4885	0.0020884	465.27134747643294	94.921	0.34294	94.921	94.735	95.078	0					29	10	3	0	0	0	0.88587	2	39637	39637;39681		5.2307	2.3415	1	1849000			572	7199	315	319	700;701	700					0.05716330574091444
AKARTHFV	8	Unmodified	_AKARTHFV_					0	0	0		ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2715637087822	2	465.269419	928.524284	3.3535	0.0015603	-0.14854	-6.9113E-05	3.205	0.0014912	465.26982952141486	93.216	0.45535	93.385	93.125	93.58	0.16835					34	13	3	0	0	0	0.88958	1	38991	38991		2.8892	0.31174	1	1624000			573	7199	315	319	702	702					0.05716330574091444
AKARTHFV	8	Unmodified	_AKARTHFV_					0	0	0		ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2716552615166	2	465.269419	928.524284	3.3668	0.0015665	1.2776	0.00059442	4.6444	0.0021609	465.270199283943	94.196	0.40736	94.341	94.133	94.54	0.14493					27	12	3	0	0	0	0.88958	1	39431	39431		2.8892	0.31174	1	1876900			574	7199	315	319	703	703					0.05716330574091444
AKARTHFV	8	Unmodified	_AKARTHFV_					0	0	0		ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	ENST00000535606.1_1_12:32112779-32113721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2723571658134	2	465.269419	928.524284	4.385	0.0020402	1.43	0.00066535	5.815	0.0027055	465.2704040281901	93.153	0.39182	94.025	93.834	94.226	0.87176					27	11	3	0	0	0	0.88958	2	39177	39177;39226		2.8892	0.31174	1	1563400			575	7199	315	319	704;705	704					0.05716330574091444
AKCIRFPLM	9	Unmodified	_AKCIRFPLM_					0	0	0		ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2008544802666	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4563	1	2.4563	1.9563	2.9563	0								0	0	0	0.42693	1	1007	1007		0.26902	0.033176	1				576	3673	316	320	706	706					0.04703927832701993
AKCIRFPLM	9	Unmodified	_AKCIRFPLM_					0	0	0		ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2016174197197	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0925	1	3.0925	2.5925	3.5925	0								0	0	0	0.42693	1	1269	1269		0.26902	0.033176	1				577	3673	316	320	707	707					0.04703927832701993
AKCIRFPLM	9	Unmodified	_AKCIRFPLM_					0	0	0		ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2019531130791	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9543	1	4.9543	4.4543	5.4543	0								0	0	0	0.42693	1	2035	2035		0.26902	0.033176	1				578	3673	316	320	708	708					0.04703927832701993
AKCIRFPLM	9	Unmodified	_AKCIRFPLM_					0	0	0		ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	ENSG00000163376|ENST00000417314|KBTBD8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2018615603447	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6609	1	5.6609	5.1609	6.1609	0								0	0	0	0.42693	1	2325	2325		0.26902	0.033176	1				579	3673	316	320	709	709					0.04703927832701993
AKELVIPAACI	11	Unmodified	_AKELVIPAACI_					0	0	0			REV__tr|A0A7D6ZZ98|A0A7D6ZZ98_9CLOTDJ-1/PfpIfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05270PE=4SV=1	REV__tr|A0A7D6ZZ98|A0A7D6ZZ98_9CLOTDJ-1/PfpIfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05270PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	564.2864868044853	2	564.328285	1126.64202	1.1745	0.00066278	-2.4524	-0.001384	-1.278	-0.0007212	564.8289688183492	77.4	0.28487	79.151	78.946	79.231	1.7514					12	8	2	0	0	0	0.14606	1	32465	32465		6.2058	2.9245	1	519440	+		580	15788	317	321	710	710					0.0837610232786119
AKFALIKL	8	Unmodified	_AKFALIKL_					0	0	0			REV__ENST00000400143.7_1_18:5293263-5295817:-|nuORF	REV__ENST00000400143.7_1_18:5293263-5295817:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	903.2116577029228	1	903.602601	902.595324	3.0852	0.0027878	4.4724	0.0040413	7.5577	0.0068291	903.6070602560692	94.509	0.37365	95.698	95.399	95.773	1.1887					14	11	2	0	0	0	2.3239	1	39732	39732		0.6015	0	1	1698900	+		581	12555	318	322	711	711					0.14013030558885475
AKFWICKKS	9	Unmodified	_AKFWICKKS_					0	0	0		CD209|p.A382T|1|0.1|ENSG00000090659|chr19:7743110-7743110|C/T|missense_variant;nc|ENSG00000090659|Q9NNX6-4|CD209;nc|ENSG00000090659|Q9NNX6-8|CD209;nc|ENSG00000090659|Q9NNX6-3|CD209;nc|ENSG00000090659|Q9NNX6-11|CD209;nc|ENSG00000090659|Q9NNX6-7|CD209;nc|ENSG00000090659|Q9NNX6-6|CD209;nc|ENSG00000090659|Q9NNX6-10|CD209;nc|ENSG00000090659|Q9NNX6-2|CD209;nc|ENSG00000090659|Q9NNX6-5|CD209;ENSG00000090659|ENST00000315599|CD209	CD209|p.A382T|1|0.1|ENSG00000090659|chr19:7743110-7743110|C/T|missense_variant	CD209|p.A382T|1|0.1|ENSG00000090659|chr19:7743110-7743110|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8087646365166	2	555.810062	1109.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.403	1	10.403	9.9028	10.903	0								0	0	0	0.42693	1	4289	4289		3.9444	0.3479	1				582	129	319	323	712	712					0.05515270221803803
AKGRYKKKK	9	Unmodified	_AKGRYKKKK_					0	0	0			REV__nc|ENSG00000132485|O95218-2|ZRANB2	REV__nc|ENSG00000132485|O95218-2|ZRANB2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	369.9854003787041	3	369.576742	1105.7084	0.46661	0.00017245	-0.56226	-0.0002078	-0.095644	-3.5348E-05	369.57657664205544	34.747	0.029945	36.565	36.549	36.579	1.8176					4	2	2	0	0	0	0.11941	1	14571	14571		1.0715	0.3738	1	5538900	+		583	9847	320	324	713	713					0.15977099004794582
AKHKLYQFLHL	11	Unmodified	_AKHKLYQFLHL_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6084472537041	3	466.60659	1396.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.073	1	86.325	85.825	86.825	0.25227								0	0	0	0.63775	1	35992	35992		0.45452	0.046251	1				584	803	321	325	714	714					0.11541308893515634
AKHRLLRVVQ	10	Unmodified	_AKHRLLRVVQ_					0	0	0		nc|ENSG00000154783|Q6ZNL6-2|FGD5;ENSG00000154783|ENST00000285046|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	610.3968994021416	2	610.390931	1218.76731	3.0638	0.0018701	2.7081	0.001653	5.7719	0.0035231	610.3925234291798	107.38	0.19057	107.53	107.43	107.62	0.15781					44	9	6	0	0	0	0.1256	1	46219	46219		0.40072	0	1	284470000			585	3397	322	326	715	715					0.16667575299129567
AKIQAEPHISH	11	Unmodified	_AKIQAEPHISH_					0	0	0			REV__ENST00000547709.1_1_17:6919595-6920637:+|nuORF	REV__ENST00000547709.1_1_17:6919595-6920637:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8358642458916	2	615.833111	1229.65167	1.3897	0.00085581	1.7704	0.0010903	3.1601	0.0019461	615.8342935182491	43.017	0.37525	44.357	44.14	44.515	1.3399					28	11	3	0	0	0	0.93654	1	18010	18010		7.609	0.50723	1	2598200	+		586	13812	323	327	716	716					0.04603006657612241
AKIQQWLWQF	10	Unmodified	_AKIQQWLWQF_					0	0	0			REV__ENST00000532159.1_1_11:35006144-35006228:+|nuORF	REV__ENST00000532159.1_1_11:35006144-35006228:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9118224978447	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0614	1	7.1377	6.6377	7.6377	0.07632								0	0	0	0.66254	1	2921	2921		0.15932	0	1		+		587	13719	324	328	717	717					0.054053580767231324
AKKARLQPKR	10	Unmodified	_AKKARLQPKR_					0	0	0			REV__ENSG00000164694|ENST00000297267|FNDC1	REV__ENSG00000164694|ENST00000297267|FNDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510864138603	3	399.263046	1194.76731	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.498	1	61.467	60.967	61.967	1.969								0	0	0	0.66227	1	24964	24964		0.62683	0.063655	1		+		588	10746	325	329	718	718					0.17771575299093456
AKKGKAAI	8	Unmodified	_AKKGKAAI_					0	0	0			REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	786.5170165896416	1	786.519599	785.512323	2.7468	0.0021604	-4.4632	-0.0035104	-1.7163	-0.0013499	786.5157878244734	103.53	0.11812	103.59	103.5	103.62	0.059502					13	5	3	0	0	0	0.89198	1	43461	43461		0	0	1	9897200	+		589	14877	326	330	719	719					0.1109871383087011
AKKGKAAI	8	Unmodified	_AKKGKAAI_					0	0	0			REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	786.519599	785.512323	1.3022	0.0010242	-3.7983	-0.0029875	-2.4961	-0.0019633	786.5165484225419	103.55	0.13294	103.55	103.46	103.6	0	-0.018749	0.00014968	NaN	0	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7688700	+		590	14877	326	330							0.1109871383087011
AKKGKAAI	8	Unmodified	_AKKGKAAI_					0	0	0			REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	REV__tr|A0A553SJ15|A0A553SJ15_NIACIAldehyde-alcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_15865PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	786.519599	785.512323	2.7468	0.0021604	-4.4632	-0.0035104	-1.7163	-0.0013499	786.5157878244734	103.53	0.11812	103.59	103.5	103.62	0.059502	0.018749	-0.00037323	NaN	0	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9897200	+		591	14877	326	330							0.1109871383087011
AKKKKKKKKG	10	Unmodified	_AKKKKKKKKG_					0	0	0		ENST00000406961.5_1_2:24991338-24991476:+|nuORF	ENST00000406961.5_1_2:24991338-24991476:+|nuORF	ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.297	1	17.337	16.837	17.837	1.0392								0	0	0	0.66255	1	6768	6768		0.13989	0.13989	1				592	6368	327	331	720	720					0.25026506998392506
AKKKRKLKKKA	11	Unmodified	_AKKKRKLKKKA_					0	0	0		ENSG00000157895|ENST00000288757|C12orf43	ENSG00000157895|ENST00000288757|C12orf43	ENSG00000157895|ENST00000288757|C12orf43	MSMS	GG20161007_CRH_Patient100_W632_01	3	664.3077270388603	2	663.974631	1325.93471	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.886	1	97.171	96.671	97.671	0.28442								0	0	0	0.63775	1	40766	40766		0	0	1				593	3485	328	332	721	721					0.28477842843858525
AKKLLFKKTL	10	Unmodified	_AKKLLFKKTL_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2758056521416	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.85	1	118.06	117.56	118.56	0.21096								0	0	0	0.66254	1	50957	50957		0.15932	0.15932	1		+		594	8904	329	333	722	722					0.20896880155692088
AKKMIPQPK	9	Unmodified	_AKKMIPQPK_					0	0	0			REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5470764040947	3	347.547684	1039.62122	1.2815	0.00044537	-2.6463	-0.00091973	-1.3649	-0.00047436	347.5468401519584	42.586	0.68266	44.508	43.949	44.632	1.9211					51	21	3	0	0	0	0.77025	1	17831	17831		4.5289	0.93237	1	4127800	+		595	9180	330	334	723	723					0.1029955673884615
AKKMIPQPK	9	Unmodified	_AKKMIPQPK_					0	0	0			REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	REV__ENST00000594723.1_1_19:49136676-49136928:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	347.547684	1039.62122	0.41321	0.00014361	-2.1057	-0.00073183	-1.6925	-0.00058822	347.5470244443237	43.282	0.79829	44.635	43.967	44.765	1.3536	0.063863	0.00027894	NaN	4.5289	48	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3307700	+		596	9180	330	334							0.1029955673884615
AKKPRRGV	8	Unmodified	_AKKPRRGV_					0	0	0			REV__ENSG00000175274|ENST00000525680|TP53I11	REV__ENSG00000175274|ENST00000525680|TP53I11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	911.5934326052666	1	911.589745	910.582468	2.8375	0.0025866	1.8972	0.0017295	4.7347	0.0043161	911.5912891998875	107.71	0.21847	107.87	107.75	107.97	0.15781					41	11	5	0	0	0	0.89176	1	46434	46434		0.79363	0.19213	1	2510100000	+		597	11151	331	335	724	724					0.1236001221936931
AKKRAAFL	8	Unmodified	_AKKRAAFL_					0	0	0		nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1;ENST00000483991.5_1_9:138703157-138717996:-|nuORF	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1941100955009	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.729	1	37.03	36.53	37.53	0.30197								0	0	0	1.0178	1	15446	15446		1.8442	1.3859	1				598	2441	332	336	725	725					0.10978091613560537
AKKRGLGG	8	Unmodified	_AKKRGLGG_					0	0	0		ENSG00000070748|ENST00000337653|CHAT	ENSG00000070748|ENST00000337653|CHAT	ENSG00000070748|ENST00000337653|CHAT	MSMS	GG20161007_CRH_Patient100_W632_02	4	393.7522155642509	2	393.750862	785.487171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.549	1	57.517	57.017	58.017	1.9684								0	0	0	1.0178	1	23294	23294		0.69038	0	1				599	861	333	337	726	726					0.08584659028338137
AKLTQDKKIN	10	Unmodified	_AKLTQDKKIN_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8500244021416	2	579.845687	1157.67682	4.5225	0.0026224	1.1066	0.00064165	5.6291	0.003264	579.8464012605159	87.518	0.37034	88.609	88.428	88.798	1.0918					26	11	3	0	0	0	0.88579	1	36941	36941		2.9952	0.49676	1	1560200	+		600	9043	334	338	727	727					0.10429061460172306
AKMIRRKKRKR	11	Unmodified	_AKMIRRKKRKR_					0	0	0			REV__ENSG00000204438|ENST00000375896|GPANK1	REV__ENSG00000204438|ENST00000375896|GPANK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	735.9875976443291	2	735.985538	1469.95652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.618	1	67.941	67.441	68.441	0.32269								0	0	0	0.63775	1	28310	28310		0.30703	0	1		+		601	11781	335	339	728	728					0.24034324320746236
AKPALGKKS	9	Unmodified	_AKPALGKKS_					0	0	0			REV__ENSG00000066735|ENST00000423312|KIF26A	REV__ENSG00000066735|ENST00000423312|KIF26A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1284362673759	3	300.527277	898.560001	0.24246	7.2867E-05	-0.30828	-9.2645E-05	-0.065812	-1.9778E-05	300.52678323036616	26.547	0.36117	26.809	26.535	26.896	0.26173					12	11	2	0	0	0	0.11954	1	11077	11077		0.26902	0	1	95122	+		602	8687	336	340	729	729					0.10666368031081674
AKPKRKPGMRP	11	Unmodified	_AKPKRKPGMRP_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1956054568291	4	317.196034	1264.75503	-2.4472	-0.00077625	1.9141	0.00060713	-0.53316	-0.00016912	317.19654149507863	36.285	0.88987	36.285	36.142	37.032	0					123	64	3	0	0	0	1.0191	1	15218	15218		2.6312	1.1761	1	37022000			603	565	337	341	730	730					0.13324215564421138
AKPKRKPGMRP	11	Unmodified	_AKPKRKPGMRP_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1954833865166	4	317.196034	1264.75503	0.14392	4.5652E-05	-0.72207	-0.00022904	-0.57815	-0.00018339	317.1957169498615	33.838	0.32571	35.661	35.601	35.927	1.8227					93	37	3	0	0	0	1.0365	1	14231	14231		1.2148	1.2148	1	51402000			604	565	337	341	731	731					0.13324215564421138
AKPREQEAV	9	Unmodified	_AKPREQEAV_					0	0	0		GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant;nc|ENSG00000277399|Q6PRD1|GPR179;ENSG00000277399|ENST00000616987|GPR179	GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.1912414431572	3	343.189212	1026.54581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.97	1	105.03	104.53	105.53	0.056801								0	0	0	0.42693	1	44403	44403		1.0715	0.3738	1				605	5472	338	342	732	732					0.033596708121422125
AKQGLGGK	8	Unmodified	_AKQGLGGK_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENST00000559537.1_1_15:81244436-81245325:-|nuORF	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	758.4571411013603	1	758.451914	757.444637	1.3428	0.0010185	3.7732	0.0028618	5.1161	0.0038803	758.4555264798702	101.72	0.33482	101.72	101.47	101.8	0					16	10	2	0	0	0	0.89051	1	42624	42624		2.3027	0	1	1573000			606	7857	339	343	733	733					0.05621263900093254
AKQGLGGK	8	Unmodified	_AKQGLGGK_					0	0	0		nc|ENSG00000117899|Q14696-2|MESD;ENST00000559537.1_1_15:81244436-81245325:-|nuORF	nc|ENSG00000117899|Q14696-2|MESD	nc|ENSG00000117899|Q14696-2|MESD	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	758.451914	757.444637	2.7299	0.0020705	5.8021	0.0044006	8.532	0.0064711	758.4568026811443	101.59	0.18571	101.66	101.55	101.73	0.067009	-0.033904	0.0011885	NaN	2.3027	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1419800			607	7857	339	343							0.05621263900093254
AKQLYQHFL	9	Unmodified	_AKQLYQHFL_					0	0	0			REV__ENST00000486462.1_1_22:17618913-17622310:-|nuORF	REV__ENST00000486462.1_1_22:17618913-17622310:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8209716677666	2	574.316566	1146.61858	3.3336	0.0019145	-0.70854	-0.00040693	2.625	0.0015076	574.8178269504267	60.368	0.3772	62.334	62.105	62.482	1.9653					29	11	3	0	0	0	0.3154	1	25381	25381		24.674	7.7316	1	4748200	+		608	8712	340	344	734	734					0.05113424605565342
AKRAGPLG	8	Unmodified	_AKRAGPLG_					0	0	0		ENSG00000125820|ENST00000377142|NKX2-2	ENSG00000125820|ENST00000377142|NKX2-2	ENSG00000125820|ENST00000377142|NKX2-2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	769.4680053591728	1	769.467898	768.460622	2.5644	0.0019732	0.057975	4.461E-05	2.6224	0.0020178	769.4679051718836	108.25	0.068924	108.41	108.37	108.44	0.15781					5	3	2	0	0	0	0.89176	1	46769	46769		0.79363	0	1	15104000			609	2279	341	345	735	735					0.0671297013699359
AKREEGNFD	9	Unmodified	_AKREEGNFD_					0	0	0		DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5;DNAH5|p.M2992Ifs*5|1|0.15|ENSG00000039139|chr5:13777331-13777332|-/AA|frameshift_variant;DNAH5|p.M2992Sfs*34|1|0.14|ENSG00000039139|chr5:13777333-13777334|-/ACAGATAGATAGATAGACAGACAGA|frameshift_variant	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.7338744997978	3	355.836839	1064.48869	2.2648	0.00080589	-2.8804	-0.0010249	-0.61558	-0.00021905	355.83576446914526	72.501	0.37619	74.311	74.198	74.574	1.8101					14	11	2	0	0	0	0.11916	1	30385	30385		2.2828	0.19677	1	244630			610	416	342	346	736	736					-0.04097796464225212
AKREKKTI	8	Unmodified	_AKREKKTI_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;EIF4G3|p.V1177Cfs*16|1|0.06|ENSG00000075151|chr1:20851333-20851334|-/A|frameshift_variant	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MSMS	GG20161007_CRH_Patient100_A02_02	2	487.3128845095634	2	487.311284	972.608014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.062	1	55.383	54.883	55.883	0.32088								0	0	0	1.0178	1	23056	23056		7.2892	0	1				611	924	343	347	737	737					0.12061441951141205
AKRRAGMI	8	Unmodified	_AKRRAGMI_					0	0	0			REV__nc|ENSG00000170615|P58743-2|SLC26A5	REV__nc|ENSG00000170615|P58743-2|SLC26A5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	300.8506042361259	3	301.516606	901.52799	1.0129	0.00030541	0.42083	0.00012689	1.4337	0.00043229	301.51685966618265	40.791	0.4063	41.108	40.825	41.231	0.31683					21	12	2	0	0	0	2.3239	1	17146	17146		0.45834	0	1	544910	+		612	10994	344	348	738	738					0.07328677076304757
AKRTKEKMS	9	Unmodified	_AKRTKEKMS_					0	0	0		ENST00000463966.5_1_3:109047772-109056364:-|nuORF;ENSG00000121570|ENST00000335658|DPPA4	ENST00000463966.5_1_3:109047772-109056364:-|nuORF	ENST00000463966.5_1_3:109047772-109056364:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2073242068291	3	360.206098	1077.59646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.899	1	58.899	58.399	59.399	0								0	0	0	0.42693	1	24563	24563		2.4985	1.427	1				613	2135	345	349	739	739					0.06076876865495251
AKRTKGQR	8	Unmodified	_AKRTKGQR_					0	0	0		ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	ENSG00000169291|ENST00000304760|SHE	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	314.7122985720634	3	315.529792	943.567546	-2.883	-0.00090968	-1.9176	-0.00060506	-4.8006	-0.0015147	315.5290719484657	26.593	0.86727	26.593	25.995	26.862	0					42	28	2	0	0	0	2.3239	1	11046	11046		3.2813	0	1	700910			614	4080	346	350	740	740					0.09350520351370051
AKSRILSKMRH	11	Unmodified	_AKSRILSKMRH_					0	0	0			REV__ENSG00000188993|ENST00000682860|LRRC66	REV__ENSG00000188993|ENST00000682860|LRRC66	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	442.2603332400322	3	442.931079	1325.77141	2.2281	0.00098689	1.1084	0.00049093	3.3364	0.0014778	442.9325300268803	83.145	0.59514	84.783	84.415	85.01	1.6379					25	18	2	0	0	0	0.14606	1	34845	34845		0.40827	0	1	471080	+		615	11596	347	351	741	741					0.12155296730520604
AKVGSLRR	8	Unmodified	_AKVGSLRR_					0	0	0		ENSG00000168582|ENST00000304502|CRYGA;ENSG00000182187|ENST00000260988|CRYGB	ENSG00000168582|ENST00000304502|CRYGA	ENSG00000168582|ENST00000304502|CRYGA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7842590212822	2	443.782693	885.550834	2.9269	0.0012989	1.5459	0.00068603	4.4728	0.001985	443.78313072530193	84.06	0.43355	84.321	84.067	84.501	0.26083					37	13	4	0	0	0	0.88587	2	35165	35116;35165		5.2307	2.6532	1	4031200			616	4042	348	352	742;743	743					0.10348019465413927
AKVGSLRR	8	Unmodified	_AKVGSLRR_					0	0	0		ENSG00000168582|ENST00000304502|CRYGA;ENSG00000182187|ENST00000260988|CRYGB	ENSG00000168582|ENST00000304502|CRYGA	ENSG00000168582|ENST00000304502|CRYGA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	443.782693	885.550834	2.0863	0.00092584	1.5093	0.00066978	3.5955	0.0015956	443.7832051736293	84.22	0.43458	84.22	83.996	84.43	0	-0.16605	0.00028941	NaN	5.2307	34	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4787100			617	4042	348	352							0.10348019465413927
AKVGSLRR	8	Unmodified	_AKVGSLRR_					0	0	0		ENSG00000168582|ENST00000304502|CRYGA;ENSG00000182187|ENST00000260988|CRYGB	ENSG00000168582|ENST00000304502|CRYGA	ENSG00000168582|ENST00000304502|CRYGA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	443.782693	885.550834	2.5737	0.0011422	-0.10769	-4.779E-05	2.466	0.0010944	443.7823312726432	82.9	0.46356	84.57	84.294	84.758	1.67	0.18383	-0.0011457	NaN	5.2307	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2499900			618	4042	348	352							0.10348019465413927
AKYDFQLL	8	Unmodified	_AKYDFQLL_					0	0	0			REV__nc|ENSG00000160208|Q14684-2|RRP1B	REV__nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	997.5370971560478	1	997.535309	996.528032	3.7001	0.003691	-1.1878	-0.0011849	2.5123	0.0025061	997.5344256214468	83.002	0.30408	84.215	84.046	84.35	1.2125					15	9	2	0	0	0	0.18971	1	34831	34831		81.613	10.479	1	3192700	+		619	10593	349	353	744	744					0.029629555573023936
ALAAALAH	8	Unmodified	_ALAAALAH_					0	0	0		DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant;nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000131584|Q96P50-4|ACAP3;ENST00000467278.5_1_1:1228946-1234134:-|nuORF;nc|ENSG00000131584|Q96P50-1|ACAP3;ENSG00000131584|ENST00000354700|ACAP3	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	737.4326049685478	1	737.43045	736.423173	2.7182	0.0020045	-0.097302	-7.1754E-05	2.6209	0.0019327	737.4301741414849	104.47	0.090775	104.52	104.48	104.57	0.056801					9	4	3	0	0	0	0.89176	1	44065	44065		0.79363	0	1	22534000			620	397	350	354	745	745					0.044418788713528556
ALAAALAH	8	Unmodified	_ALAAALAH_					0	0	0		DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant;nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;nc|ENSG00000131584|Q96P50-4|ACAP3;ENST00000467278.5_1_1:1228946-1234134:-|nuORF;nc|ENSG00000131584|Q96P50-1|ACAP3;ENSG00000131584|ENST00000354700|ACAP3	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	737.4316894412041	1	737.43045	736.423173	2.6761	0.0019735	-0.87255	-0.00064344	1.8036	0.00133	737.4295029388894	104.4	0.093216	104.57	104.52	104.62	0.1731					7	4	2	0	0	0	0.89176	1	44159	44159		0.79363	0	1	50740000			621	397	350	354	746	746					0.044418788713528556
ALAAALAHI	9	Unmodified	_ALAAALAHI_					0	0	0		DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant;nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7626525759697	2	425.760895	849.507237	2.3417	0.000997	0.63474	0.00027025	2.9764	0.0012672	425.7606980792028	44.237	0.28766	45.59	45.439	45.727	1.3536					13	8	2	0	0	0	0.08022	1	18528	18528		56.048	10.298	1	1327200			622	397	351	355	747	747					0.0764640996825392
ALAAALAHI	9	Unmodified	_ALAAALAHI_					0	0	0		DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant;nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7607299685478	2	425.760895	849.507237	2.1209	0.00090302	-0.91071	-0.00038774	1.2102	0.00051527	425.76064046942304	43.564	0.21205	45.508	45.427	45.639	1.9438					11	6	2	0	0	0	0.11074	1	18259	18259		45.75	9.2838	1	880920			623	397	351	355	748	748					0.0764640996825392
ALAAALAY	8	Unmodified	_ALAAALAY_					0	0	0		tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	382.2204162478447	2	382.221072	762.42759	0.10877	4.1575E-05	-1.0104	-0.00038621	-0.90167	-0.00034464	382.2206225599923	62.402	0.68335	62.402	61.993	62.676	0					42	21	3	0	0	0	0.89176	1	25999	25999		0.79363	0	1	8612700			624	10187	352	356	749	749					0.036873432942570616
ALAAALAY	8	Unmodified	_ALAAALAY_					0	0	0		tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	tr|A0A7D6VS55|A0A7D6VS55_9CLOTSmallbasicfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14660PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.2204772830009	2	382.221072	762.42759	2.3044	0.00088077	-2.6409	-0.0010094	-0.33656	-0.00012864	382.2199663817389	61.249	0.5843	62.667	62.312	62.896	1.4177					39	18	3	0	0	0	0.89176	1	25688	25688		0.79363	0	1	9193800			625	10187	352	356	750	750					0.036873432942570616
ALAAKTIGLL	10	Unmodified	_ALAAKTIGLL_					0	0	0			REV__tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	REV__tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.8190795779228	2	485.81841	969.622267	0.60539	0.00029411	0.85313	0.00041447	1.4585	0.00070858	485.81864022794747	26.002	0.15431	27.718	27.639	27.793	1.7167					6	4	2	0	0	0	0.80011	1	10866	10866		12.241	2.1667	1	431350	+		626	15351	353	357	751	751					0.13624094379429152
ALAALHVTL	9	Unmodified	_ALAALHVTL_					0	0	0		ENSG00000143570|ENST00000356205|SLC39A1	ENSG00000143570|ENST00000356205|SLC39A1	ENSG00000143570|ENST00000356205|SLC39A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.7839538455009	2	454.781828	907.549102	1.274	0.0005794	3.2559	0.0014807	4.5299	0.0020601	454.7838142459238	52.111	0.22512	53.507	53.395	53.62	1.3966					12	6	2	0	0	0	0.046276	1	21842	21842		70.716	14.174	1	2150700			627	3041	354	358	752	752					0.09162965656810229
ALAALHVTL	9	Unmodified	_ALAALHVTL_					0	0	0		ENSG00000143570|ENST00000356205|SLC39A1	ENSG00000143570|ENST00000356205|SLC39A1	ENSG00000143570|ENST00000356205|SLC39A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	454.781828	907.549102	0.73869	0.00033594	0.33726	0.00015338	1.0759	0.00048932	454.78273977983577	51.5	0.22032	53.475	53.367	53.588	1.9753	-0.016225	-0.0017295	NaN	70.716	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2905000			628	3041	354	358							0.09162965656810229
ALADFSFTA	9	Unmodified	_ALADFSFTA_					0	0	0		ENSG00000171049|ENST00000340023|FPR2	ENSG00000171049|ENST00000340023|FPR2	ENSG00000171049|ENST00000340023|FPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7348815798759	2	471.732	941.449448	3.082	0.0014539	2.663	0.0012562	5.745	0.0027101	471.73326501141224	75.659	0.50744	77.441	77.196	77.704	1.7817					42	16	3	0	0	0	0.15456	1	31689	31689		42.095	3.9434	1	7315600			629	4175	355	359	753	753					-0.023618967478114428
ALADGVQKV	9	Unmodified	_ALADGVQKV_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7617370486259	2	450.761092	899.507631	0.53287	0.0002402	1.4674	0.00066144	2.0002	0.00090163	450.7615032482339	18.418	0.12152	19.866	19.787	19.908	1.448					6	3	2	0	0	0	0.35391	1	7656	7656		22.736	3.2973	1	367440			630	1265	356	360	754	754					0.053857848974644185
ALADGVQKV	9	Unmodified	_ALADGVQKV_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	450.761092	899.507631	0.878	0.00039577	2.2799	0.0010277	3.1579	0.0014235	450.7616986434769	18.885	0.1546	19.944	19.85	20.005	1.0585	0.038656	0.00044842	NaN	22.736	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343630			631	1265	356	360							0.053857848974644185
ALADIVWRA	9	Unmodified	_ALADIVWRA_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7917358279228	2	507.790184	1013.56581	2.3614	0.0011991	-0.86932	-0.00044143	1.492	0.00075764	507.7902731108078	55.559	0.43496	55.88	55.643	56.078	0.32088					30	13	3	0	0	0	0.033504	2	23264	23217;23264		81.89	38.032	1	4028600			632	1558	357	361	755;756	756					0.05957466542736256
ALADIVWRA	9	Unmodified	_ALADIVWRA_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7916747927666	2	507.790184	1013.56581	2.0826	0.0010575	0.18276	9.2803E-05	2.2653	0.0011503	507.79072358160295	54.34	0.50992	55.745	55.485	55.995	1.4048					39	15	4	0	0	0	0.019432	3	22752	22704;22752;22791		99.799	45.025	1	9000200			633	1558	357	361	757;758;759	758					0.05957466542736256
ALADIVWRA	9	Unmodified	_ALADIVWRA_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7906066775322	2	507.790184	1013.56581	1.4029	0.00071236	-0.49681	-0.00025227	0.90606	0.00046009	507.79049686939595	53.873	0.43833	55.843	55.595	56.034	1.9697					37	13	4	0	0	0	0.019432	3	22557	22510;22557;22605		99.799	53.778	1	8207400			634	1558	357	361	760;761;762	761					0.05957466542736256
ALADIVWRA	9	Unmodified	_ALADIVWRA_					0	0	0		ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	ENSG00000106125|ENST00000265299|MINDY4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	507.790184	1013.56581	2.1029	0.0010678	-0.94014	-0.0004774	1.1627	0.00059041	507.79006961833943	56.098	0.40481	56.098	55.851	56.256	0	0.20665	-0.00042656	NaN	99.799	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4954900			635	1558	357	361							0.05957466542736256
ALADLQEAVKL	11	Unmodified	_ALADLQEAVKL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;ENST00000470074.1_1_2:160076105-160087520:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.8416625857353	2	585.840071	1169.66559	1.9874	0.0011643	-1.8555	-0.001087	0.13194	7.7296E-05	585.8388566810945	57.444	0.16077	57.444	57.376	57.536	0					8	5	2	0	0	0	0.58511	1	23992	23992		21.59	10.791	1	851040			636	1901	358	362	763	763					0.08754239366044203
ALADLQEAVKL	11	Unmodified	_ALADLQEAVKL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;ENST00000470074.1_1_2:160076105-160087520:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	585.840071	1169.66559	2.1653	0.0012685	-2.398	-0.0014048	-0.23268	-0.00013631	585.8383704887805	56.99	0.18397	57.311	57.2	57.384	0.32103	-0.016277	4.791E-05	NaN	21.59	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1325300			637	1901	358	362							0.08754239366044203
ALADLQEAVKL	11	Unmodified	_ALADLQEAVKL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;ENST00000470074.1_1_2:160076105-160087520:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	585.840071	1169.66559	0.63176	0.00037011	-2.8525	-0.0016711	-2.2207	-0.001301	585.8384565945282	55.817	0.20658	57.227	57.16	57.366	1.4099	-0.10043	-0.00048457	NaN	21.59	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3081000			638	1901	358	362							0.08754239366044203
ALADQLQPA	9	Unmodified	_ALADQLQPA_					0	0	0			REV__ENST00000378204.6_1_8:119123785-119123992:-|nuORF	REV__ENST00000378204.6_1_8:119123785-119123992:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	463.7522460818291	2	463.750724	925.486896	2.709	0.0012563	-0.11889	-5.5136E-05	2.5901	0.0012011	463.7507804310654	76.123	0.5726	77.417	77.19	77.762	1.2938					31	18	2	0	0	0	0.22154	1	31919	31919		30.637	1.555	1	7300600	+		639	12738	359	363	764	764					0.021171945177911766
ALADVATVL	9	Unmodified	_ALADVATVL_					0	0	0		ENST00000491390.1_1_1:160325502-160326610:+|nuORF;nc|ENSG00000162736|Q92542-2|NCSTN;ENSG00000162736|ENST00000294785|NCSTN	ENST00000491390.1_1_1:160325502-160326610:+|nuORF	ENST00000491390.1_1_1:160325502-160326610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	872.5097534060478	1	872.50876	871.501483	2.6861	0.0023436	-0.040804	-3.5602E-05	2.6453	0.002308	872.5089292399815	60.261	0.48103	61.68	61.39	61.871	1.4196					18	15	2	0	0	0	0.11478	1	25278	25278		44.407	2.3125	1	1119300			640	3644	360	364	765	765					0.060592666659431416
ALAEEQLRARR	11	Unmodified	_ALAEEQLRARR_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	656.8744994997978	2	656.875842	1311.73713	1.7032	0.0011188	2.7041	0.0017762	4.4072	0.002895	656.8771617924152	78.289	0.25441	78.598	78.484	78.738	0.30932					16	7	3	0	0	0	0.87205	1	32752	32752		11.495	0.67078	1	892110			641	2935	361	365	766	766					0.09373171843253658
ALAEPPHLP	9	Unmodified	_ALAEPPHLP_					0	0	0			REV__ENST00000377724.7_1_9:37800918-37801074:+|nuORF	REV__ENST00000377724.7_1_9:37800918-37801074:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7645141482353	2	472.763635	943.512717	2.066	0.00097675	-1.0259	-0.000485	1.0402	0.00049176	472.7631079680356	96.737	0.16637	96.737	96.634	96.8	0					13	5	3	0	0	0	0.12174	1	40423	40423		42.095	3.919	1	15809000	+		642	12734	362	366	767	767					0.03870088760083945
ALAGATGLRD	10	Unmodified	_ALAGATGLRD_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7659789919853	2	472.761623	943.508694	4.0425	0.0019111	3.427	0.0016201	7.4695	0.0035313	472.7631064827318	96.29	0.30789	96.711	96.572	96.88	0.4212					15	9	3	0	0	0	0.24244	1	40536	40536		43.772	1.6778	1	8710600			643	3799	363	367	768	768					0.034679992663768644
ALAGATGLRD	10	Unmodified	_ALAGATGLRD_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7658264040947	2	472.761623	943.508694	3.5531	0.0016798	4.0924	0.0019348	7.6455	0.0036145	472.7634819664877	96.044	0.30283	96.446	96.336	96.638	0.40208					23	9	4	0	0	0	0.10014	1	40396	40396		63.961	2.3586	1	18658000			644	3799	363	367	769	769					0.034679992663768644
ALAGATGLRD	10	Unmodified	_ALAGATGLRD_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	472.761623	943.508694	2.0661	0.00097675	3.2286	0.0015264	5.2947	0.0025031	472.7631079680356	96.737	0.16637	96.737	96.634	96.8	0	0.10154	-0.00020152	NaN	63.961	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15809000			645	3799	363	367							0.034679992663768644
ALAGICYD	8	Unmodified	_ALAGICYD_					0	0	0		ENSG00000141540|ENST00000269346|TTYH2;nc|ENSG00000141540|Q9BSA4-2|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	413.7541686892509	2	413.194196	824.37384	1.7046	0.00070434	0.056591	2.3383E-05	1.7612	0.00072773	413.1945705707513	65.671	0.2384	67.579	67.496	67.735	1.9085					10	7	2	0	0	0	2.3239	1	27525	27525		6.3541	0	1	830880			646	2966	364	368	770	770					-0.045371971997496985
ALAGPLAPT	9	Unmodified	_ALAGPLAPT_					0	0	0			REV__ENST00000498209.6_1_11:2937879-2942743:+|nuORF	REV__ENST00000498209.6_1_11:2937879-2942743:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	810.4717895388603	1	810.47198	809.464704	1.3724	0.0011123	-0.25368	-0.0002056	1.1188	0.00090673	810.472128124448	42.272	0.27881	44.194	44.011	44.29	1.9211					12	8	2	0	0	0	0.11478	1	17735	17735		44.407	0	1	907580	+		647	13490	365	369	771	771					0.05235014840025087
ALAGVRKAAR	10	Unmodified	_ALAGVRKAAR_					0	0	0			REV__ENST00000356853.9_1_2:220022944-220025484:-|nuORF	REV__ENST00000356853.9_1_2:220022944-220025484:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2176086306572	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.138	1	94.01	93.51	94.51	0.87176								0	0	0	0.66218	1	39203	39203		0.77653	0	1		+		648	12552	366	370	772	772					0.12479666419540081
ALAGVSFEI	9	Unmodified	_ALAGVSFEI_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.4947387576103	1	906.49311	905.485833	1.5215	0.0013792	0.37719	0.00034192	1.8987	0.0017211	906.4932310900009	70.88	0.34857	70.88	70.718	71.067	0					17	10	2	0	0	0	0.3154	1	29519	29519		24.674	1.5255	1	973170			649	1422	367	371	773	773					0.029309801489034726
ALAGVSFEI	9	Unmodified	_ALAGVSFEI_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	906.4958984255791	1	906.49311	905.485833	1.7473	0.0015839	-0.55895	-0.00050668	1.1884	0.0010773	906.4933224988546	69.378	0.31573	70.743	70.501	70.817	1.3657					19	10	2	0	0	0	0.0068741	2	29129	29075;29129		114.94	26.04	1	4567400			650	1422	367	371	774;775	775					0.029309801489034726
ALAGVSFEI	9	Unmodified	_ALAGVSFEI_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	906.4962646365166	1	906.49311	905.485833	1.266	0.0011476	1.3659	0.0012382	2.6319	0.0023858	906.4951132421712	68.75	0.3589	70.602	70.439	70.798	1.853					21	11	2	0	0	0	0.04206	1	28830	28830		74.396	10.16	1	3788400			651	1422	367	371	776	776					0.029309801489034726
ALAHLSALI	9	Unmodified	_ALAHLSALI_					0	0	0			REV__ENSG00000119922|ENST00000371826|IFIT2	REV__ENSG00000119922|ENST00000371826|IFIT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.7827026247978	2	454.781828	907.549102	1.9445	0.00088434	1.0446	0.00047506	2.9891	0.0013594	454.78198934583264	54.117	0.31352	54.117	53.935	54.249	0					13	9	2	0	0	0	0.22519	1	22538	22538		30.225	1.738	1	638760	+		652	9559	368	372	777	777					0.09162965656787492
ALAHLSALI	9	Unmodified	_ALAHLSALI_					0	0	0			REV__ENSG00000119922|ENST00000371826|IFIT2	REV__ENSG00000119922|ENST00000371826|IFIT2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	454.781828	907.549102	1.9445	0.00088434	1.0446	0.00047506	2.9891	0.0013594	454.78198934583264	54.117	0.31352	54.117	53.935	54.249	0	0	0	NaN	30.225	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	638760	+		653	9559	368	372							0.09162965656787492
ALAIDHHSP	9	Unmodified	_ALAIDHHSP_					0	0	0			REV__ENSG00000105397|ENST00000525621|TYK2	REV__ENSG00000105397|ENST00000525621|TYK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	320.8333312869072	3	320.83477	959.482479	-2.3924	-0.00076756	-1.5918	-0.0005107	-3.9842	-0.0012783	320.83410319699954	96.737	0.54102	96.737	96.539	97.08	0					24	17	2	0	0	0	0.49082	1	40446	40446		10.8	0	1	9127100	+		654	9171	369	373	778	778					0.0011173009489766628
ALAIYKGQNI	10	Unmodified	_ALAIYKGQNI_					0	0	0		tr|A0A553SM34|A0A553SM34_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21825PE=4SV=1	tr|A0A553SM34|A0A553SM34_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21825PE=4SV=1	tr|A0A553SM34|A0A553SM34_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21825PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8105956912041	2	545.816399	1089.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.243	1	72.081	71.581	72.581	1.8378								0	0	0	0.65187	1	29465	29465		12.532	0.89125	1				655	16364	370	374	779	779					0.07702004885709357
ALAKKALLAL	10	Unmodified	_ALAKKALLAL_					0	0	0		ENST00000526156.1_1_11:4107651-4113025:+|nuORF;nc|ENSG00000167323|Q13586|STIM1;ENSG00000167323|ENST00000526596|STIM1	ENST00000526156.1_1_11:4107651-4113025:+|nuORF	ENST00000526156.1_1_11:4107651-4113025:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9032775759697	3	337.902344	1010.6852	1.0647	0.00035976	0.28151	9.5122E-05	1.3462	0.00045488	337.9026994706104	49.138	2.8271	51.115	50.854	53.681	1.9772					305	95	4	0	0	0	0.21129	2	20637	20637;20676		47.594	5.6388	1	169790000			656	3963	371	375	780;781	780					0.18028660167453836
ALALEFPCP	9	Unmodified	_ALALEFPCP_					0	0	0		ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.8330566287041	3	320.83349	959.478639	2.0484	0.0006572	-2.6827	-0.0008607	-0.63429	-0.0002035	320.8325361667875	96.544	0.55876	96.649	96.573	97.132	0.105					21	17	2	0	0	0	0.61249	1	40416	40416		7.1017	2.6956	1	8144600			657	7131	372	376	782	782					-0.002720757231713833
ALALEFPCP	9	Unmodified	_ALALEFPCP_					0	0	0		ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.8332397341728	3	320.83349	959.478639	2.6344	0.0008452	-1.8875	-0.00060558	0.74689	0.00023963	320.832900314913	96.29	0.30727	96.711	96.541	96.848	0.4212					20	9	3	0	0	0	0.37357	1	40521	40521		15.248	4.9332	1	5079000			658	7131	372	376	783	783					-0.002720757231713833
ALALEFPCP	9	Unmodified	_ALALEFPCP_					0	0	0		ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	ENST00000527257.1_1_11:124972470-124972632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.8337280154228	3	320.83349	959.478639	2.6144	0.00083878	-0.82007	-0.00026311	1.7943	0.00057567	320.8332334456599	96.044	0.27219	96.446	96.366	96.638	0.40208					20	8	3	0	0	0	0.49082	1	40406	40406		10.8	0	1	7686400			659	7131	372	376	784	784					-0.002720757231713833
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	883.5607177615166	1	883.56113	882.553853	1.751	0.0015471	-0.096398	-8.5174E-05	1.6546	0.0014619	883.5612073755866	74.287	0.41556	74.287	74.047	74.462	0					30	12	3	0	0	0	0.12362	1	30885	30885		59.795	10.126	1	3365000			660	80	373	377	785	785					0.10787849799555715
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	883.5626098513603	1	883.56113	882.553853	2.4248	0.0021425	-0.69441	-0.00061356	1.7304	0.0015289	883.5605536979324	73.742	0.38422	74.067	73.849	74.233	0.32494					30	11	3	0	0	0	0.12362	2	30852	30803;30852		59.795	10.126	1	3286400			661	80	373	377	786;787	787					0.10787849799555715
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.2857849001884	2	442.284203	882.553853	3.306	0.0014622	-0.71455	-0.00031604	2.5914	0.0011461	442.28373758556353	72.579	0.46445	73.909	73.762	74.227	1.3298					24	14	2	0	0	0	0.19438	1	30463	30463		49.669	9.2203	1	3241400			662	80	373	377	788	788					0.10787849799555715
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	883.5630981326103	1	883.56113	882.553853	2.9863	0.0026386	0.55963	0.00049447	3.5459	0.003133	883.561931692883	72.627	0.49326	73.957	73.702	74.195	1.3297					37	15	3	0	0	0	0.12362	1	30526	30526		59.795	10.126	1	16460000			663	80	373	377	789	789					0.10787849799555715
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.2851440310478	2	442.284203	882.553853	2.8458	0.0012586	-1.1817	-0.00052264	1.6641	0.00073599	442.2836241505433	72.069	0.36357	73.893	73.756	74.119	1.824					27	11	3	0	0	0	0.19438	1	30294	30294		49.669	13.625	1	3186400			664	80	373	377	790	790					0.10787849799555715
ALALGGIAVV	10	Unmodified	_ALALGGIAVV_					0	0	0		nc|ENSG00000150347|Q14865-3|ARID5B;ARID5B|p.M861Cfs*21|1|0.05|ENSG00000150347|chr10:62092044-62092044|A/-|frameshift_variant;ENSG00000150347|ENST00000279873|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	nc|ENSG00000150347|Q14865-3|ARID5B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	442.284203	882.553853	2.852	0.0012614	-0.67349	-0.00029787	2.1785	0.00096351	442.28366758918673	73.764	0.32111	74.089	73.912	74.233	0.32494	0.060344	2.0696E-05	NaN	49.669	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1061400			665	80	373	377							0.10787849799555715
ALAPGLPTA	9	Unmodified	_ALAPGLPTA_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000472389.1_1_1:212606336-212608058:+|nuORF;ENST00000479589.5_1_1:212606267-212617713:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.7400390505791	2	405.739628	809.464704	1.3319	0.00054042	1.3805	0.00056014	2.7125	0.0011006	405.7390396167206	42.753	0.25043	44.092	44.014	44.265	1.3399					11	7	2	0	0	0	0.22519	1	17928	17928		30.225	5.5509	1	960640			666	2021	374	378	791	791					0.05235014840036456
ALAPGLPTA	9	Unmodified	_ALAPGLPTA_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000472389.1_1_1:212606336-212608058:+|nuORF;ENST00000479589.5_1_1:212606267-212617713:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	810.4741088747978	1	810.47198	809.464704	1.285	0.0010415	0.76864	0.00062296	2.0537	0.0016644	810.4729829396232	42.824	0.28341	44.164	44.014	44.298	1.3399					12	8	2	0	0	0	0.069258	1	17951	17951		60.39	6.814	1	932100			667	2021	374	378	792	792					0.05235014840036456
ALAPGLPTA	9	Unmodified	_ALAPGLPTA_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000472389.1_1_1:212606336-212608058:+|nuORF;ENST00000479589.5_1_1:212606267-212617713:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	810.47198	809.464704	1.7834	0.0014454	-1.6313	-0.0013221	0.15207	0.00012325	810.4704444076775	44.059	0.26868	44.383	44.244	44.512	0.32389	0.13599	-0.0010913	NaN	60.39	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470160			668	2021	374	378							0.05235014840036456
ALAPGLPTA	9	Unmodified	_ALAPGLPTA_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000472389.1_1_1:212606336-212608058:+|nuORF;ENST00000479589.5_1_1:212606267-212617713:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	810.47198	809.464704	1.3724	0.0011123	-0.25368	-0.0002056	1.1188	0.00090673	810.472128124448	42.272	0.27881	44.194	44.011	44.29	1.9211	-0.053144	2.5189E-05	NaN	60.39	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907580			669	2021	374	378							0.05235014840036456
ALAREWRLQVA	11	Unmodified	_ALAREWRLQVA_					0	0	0			REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8791992068291	2	656.877853	1311.74115	1.9787	0.0012998	-0.33291	-0.00021868	1.6458	0.0010811	656.8774543755774	76.82	0.28671	78.587	78.45	78.736	1.7672					19	8	3	0	0	0	0.74096	1	32230	32230		17.113	0	1	1776300	+		670	13361	375	379	793	793					0.09775261336994845
ALAREWRLQVA	11	Unmodified	_ALAREWRLQVA_					0	0	0			REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	656.877853	1311.74115	2.0245	0.0013298	-1.0852	-0.00071281	0.93934	0.00061703	656.8767745652863	78.802	0.24512	78.802	78.662	78.907	0	0.15106	-0.0009628	NaN	17.113	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	720330	+		671	13361	375	379							0.09775261336994845
ALAREWRLQVA	11	Unmodified	_ALAREWRLQVA_					0	0	0			REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	REV__ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	656.877853	1311.74115	1.9787	0.0012998	-0.33291	-0.00021868	1.6458	0.0010811	656.8774543755774	76.82	0.28671	78.587	78.45	78.736	1.7672	-0.063561	2.5468E-05	NaN	17.113	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1776300	+		672	13361	375	379							0.09775261336994845
ALARREEP	8	Unmodified	_ALARREEP_					0	0	0			REV__ENSG00000198833|ENST00000435041|UBE2J1	REV__ENSG00000198833|ENST00000435041|UBE2J1	MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2615539431572	2	471.261791	940.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.295	1	60.295	59.795	60.795	0								0	0	0	1.0178	1	25147	25147		5.7604	1.0044	1		+		673	11742	376	380	794	794					0.036394189862335224
ALASHDQDT	9	Unmodified	_ALASHDQDT_					0	0	0		nc|ENSG00000100842|O43281-3|EFS;nc|ENSG00000100842|O43281-2|EFS;ENSG00000100842|ENST00000216733|EFS	nc|ENSG00000100842|O43281-3|EFS	nc|ENSG00000100842|O43281-3|EFS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2179748415947	2	479.217246	956.419939	2.6095	0.0012505	-2.3537	-0.0011279	0.25576	0.00012256	479.2164950514624	76.119	0.60283	77.413	77.19	77.792	1.2938					126	19	10	0	0	0	0.5697	1	32006	32006		12.532	1.7076	1	40450000			674	1306	377	381	795	795					-0.06001460763945943
ALASLIRSV	9	Unmodified	_ALASLIRSV_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2921020388603	2	465.292559	928.570566	2.3515	0.0010941	-0.61881	-0.00028793	1.7327	0.00080621	465.2923429910947	48.848	0.32156	48.848	48.68	49.002	0					16	9	2	0	0	0	0.3091	1	20422	20422		24.991	5.734	1	1160500			675	1456	378	382	796	796					0.10342350685516521
ALASLIRSV	9	Unmodified	_ALASLIRSV_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2930786013603	2	465.292559	928.570566	2.4198	0.0011259	-0.27338	-0.0001272	2.1464	0.00099872	465.2922685956357	48.309	0.26157	48.639	48.494	48.756	0.33034					16	8	2	0	0	0	0.28372	2	20292	20251;20292		26.268	10.421	1	1205200			676	1456	378	382	797;798	798					0.10342350685516521
ALASLIRSV	9	Unmodified	_ALASLIRSV_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2935058474541	2	465.292559	928.570566	2.0802	0.00096792	0.38698	0.00018006	2.4672	0.001148	465.2926982861877	46.638	0.34692	48.013	47.832	48.179	1.3751					25	10	3	0	0	0	0.081597	1	19549	19549		55.503	11.644	1	2872000			677	1456	378	382	799	799					0.10342350685516521
ALASLIRSV	9	Unmodified	_ALASLIRSV_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2928039431572	2	465.292559	928.570566	1.6907	0.00078666	0.39012	0.00018152	2.0808	0.00096818	465.2928149038774	46.17	0.4036	48.141	47.943	48.347	1.9703					28	12	3	0	0	0	0.15456	1	19315	19315		38.176	5.8701	1	2273000			678	1456	378	382	800	800					0.10342350685516521
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	874.5081054568291	1	874.506651	873.499375	1.7179	0.0015023	0.0085295	7.4591E-06	1.7265	0.0015098	874.507039245698	78.531	0.47316	78.531	78.251	78.724	0					38	14	4	0	0	0	0.030843	3	32678	32629;32678;32732		86.121	11.725	1	4821600			679	1526	379	383	801;802;803	802					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7568237185478	2	437.756964	873.499375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.513	1	78.513	78.013	79.013	0								0	0	0	0.0435	1	32683	32683		49.669	11.518	1				680	1526	379	383	804	804					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	874.5097534060478	1	874.506651	873.499375	1.9007	0.0016622	0.40447	0.00035371	2.3052	0.0020159	874.5074129843404	77.998	0.41628	78.307	78.099	78.516	0.30933					34	12	4	0	0	0	0.010702	3	32619	32572;32619;32676		106.85	12.962	1	5063300			681	1526	379	383	805;806;807	806					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MSMS	GG20161007_CRH_Patient100_A02_02	2	437.7577392458916	2	437.756964	873.499375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.067	1	78.377	77.877	78.877	0.30933								0	0	0	0.19733	1	32642	32642		26.341	0	1				682	1526	379	383	808	808					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	874.5081664919853	1	874.506651	873.499375	2.4879	0.0021757	-0.48098	-0.00042062	2.0069	0.0017551	874.5067064988299	76.984	0.47287	78.265	78.001	78.474	1.2809					42	14	4	0	0	0	0.010702	4	32294	32249;32294;32331;32373		106.85	12.962	1	12529000			683	1526	379	383	809;810;811;812	810					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7588073611259	2	437.756964	873.499375	2.7876	0.0012203	-0.33351	-0.000146	2.454	0.0010743	437.7568934327542	76.92	0.37826	78.214	78.045	78.423	1.2938					27	11	3	0	0	0	0.13437	1	32263	32263		40.449	4.4044	1	3531300			684	1526	379	383	813	813					0.057565146565139
ALASVIMGL	9	Unmodified	_ALASVIMGL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	874.5081664919853	1	874.506651	873.499375	2.585	0.0022606	-0.36815	-0.00032195	2.2168	0.0019386	874.5066013061611	76.433	0.47904	78.2	77.94	78.419	1.7672					42	14	4	0	0	0	0.010702	4	32058	32008;32058;32095;32141		106.85	12.962	1	10622000			685	1526	379	383	814;815;816;817	815					0.057565146565139
ALASVIMGL	9	Oxidation (M)	_ALASVIM(Oxidation (M))GL_		ALASVIM(1)GL		ALASVIM(71)GL	0	0	1		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	890.5033447146416	1	890.501566	889.494289	2.0805	0.0018527	-0.99776	-0.00088851	1.0827	0.00096415	890.5003322722214	63.955	0.44769	65.362	65.049	65.497	1.4071					22	13	2	0	0	0	0.046276	1	26777	26777		70.716	10.326	1	1247400			686	1526	379	384	818	818		27			0.04512210793905069
ALASVIMGL	9	Oxidation (M)	_ALASVIM(Oxidation (M))GL_		ALASVIM(1)GL		ALASVIM(71)GL	0	0	1		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	890.5055419802666	1	890.501566	889.494289	2.3146	0.0020612	-0.53594	-0.00047725	1.7787	0.0015839	890.5016079131093	63.348	0.3825	65.293	65.091	65.473	1.9444					19	11	2	0	0	0	0.046276	1	26568	26568		70.716	9.3581	1	1150300			687	1526	379	384	819	819		27			0.04512210793905069
ALATKMYE	8	Oxidation (M)	_ALATKM(Oxidation (M))YE_		ALATKM(1)YE		ALATKM(44)YE	0	0	1			REV__tr|A0A7D6ZVA0|A0A7D6ZVA0_9CLOTChaperoneproteinHtpGOS=ClostridiumintestinaleOX=36845GN=htpGPE=3SV=1	REV__tr|A0A7D6ZVA0|A0A7D6ZVA0_9CLOTChaperoneproteinHtpGOS=ClostridiumintestinaleOX=36845GN=htpGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7354614138603	2	471.733686	941.452819	2.6598	0.0012547	0.32103	0.00015144	2.9809	0.0014062	471.73384841469857	76.091	0.44945	77.385	77.19	77.639	1.2938					43	14	4	0	0	0	0.54738	2	31933	31933;31983		44.407	6.2558	1	7943400	+		688	15730	380	385	820;821	820		127			-0.02024969965452783
ALATKMYE	8	Oxidation (M)	_ALATKM(Oxidation (M))YE_					0	0	1			REV__tr|A0A7D6ZVA0|A0A7D6ZVA0_9CLOTChaperoneproteinHtpGOS=ClostridiumintestinaleOX=36845GN=htpGPE=3SV=1	REV__tr|A0A7D6ZVA0|A0A7D6ZVA0_9CLOTChaperoneproteinHtpGOS=ClostridiumintestinaleOX=36845GN=htpGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	471.733686	941.452819	2.6598	0.0012547	0.32103	0.00015144	2.9809	0.0014062	471.73384841469857	76.091	0.44945	77.385	77.19	77.639	1.2938	-0.027729	0.00061404	NaN	44.407	43	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7943400	+		689	15730	380	385				127			-0.02024969965452783
ALATLIHQV	9	Unmodified	_ALATLIHQV_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2936279177666	2	483.292559	964.570566	1.9663	0.00095032	0.42649	0.00020612	2.3928	0.0011564	483.29275999172523	44.178	0.41053	44.178	43.938	44.349	0					38	12	4	0	0	0	0.002761	3	18487	18443;18487;18534		128.37	53.943	1	9145600			690	1749	381	386	822;823;824	823					0.08686350685502475
ALATLIHQV	9	Unmodified	_ALATLIHQV_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2936584353447	2	483.292559	964.570566	2.5557	0.0012352	-0.22696	-0.00010969	2.3287	0.0011255	483.2924435943546	43.558	0.38087	43.881	43.675	44.056	0.32389					34	11	4	0	0	0	0.00090036	3	18290	18240;18290;18330		133.7	62.568	1	9236600			691	1749	381	386	825;826;827	826					0.08686350685502475
ALATLIHQV	9	Unmodified	_ALATLIHQV_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2937805056572	2	483.292559	964.570566	2.0915	0.0010108	0.42345	0.00020465	2.5149	0.0012155	483.29265681674764	42.026	0.4287	43.366	43.11	43.539	1.3399					45	13	4	0	0	0	5.2553E-05	3	17598	17553;17598;17648		149.99	57.172	1	16903000			692	1749	381	386	828;829;830	829					0.08686350685502475
ALATLIHQV	9	Unmodified	_ALATLIHQV_					0	0	0		ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	ENSG00000111652|ENST00000543155|COPS7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2929260134697	2	483.292559	964.570566	1.7423	0.00084205	0.47451	0.00022933	2.2168	0.0010714	483.2926168281604	41.478	0.42295	43.371	43.15	43.573	1.8927					37	13	4	0	0	0	0.0075027	3	17374	17333;17374;17426		112.59	48.357	1	22066000			693	1749	381	386	831;832;833	832					0.08686350685502475
ALATLTPLTL	10	Unmodified	_ALATLTPLTL_					0	0	0			REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3165466189384	2	507.3157	1012.61685	1.7542	0.00088996	0.87098	0.00044186	2.6252	0.0013318	507.31609449589	57.097	0.23695	58.511	58.4	58.637	1.4145					14	7	2	0	0	0	0.35292	1	23925	23925		36.127	1.7253	1	2449700	+		694	13728	382	387	834	834					0.11104370796954299
ALATLTPLTL	10	Unmodified	_ALATLTPLTL_					0	0	0			REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3164855837822	2	507.3157	1012.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.233	1	58.647	58.147	59.147	1.4145								0	0	0	0.45714	1	23992	23992		26.884	2.8631	1		+		695	13728	382	387	835	835					0.11104370796954299
ALATLTPLTL	10	Unmodified	_ALATLTPLTL_					0	0	0			REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	REV__ENST00000533762.5_3_1:26149812-26150235:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3162414431572	2	507.3157	1012.61685	1.051	0.0005332	1.0253	0.00052015	2.0763	0.0010534	507.31621981246803	56.503	0.30012	58.472	58.303	58.603	1.9684					16	9	2	0	0	0	0.32206	2	23746	23691;23746		37.974	7.3375	1	3598400	+		696	13728	382	387	836;837	837					0.11104370796954299
ALATYLGVI	9	Unmodified	_ALATYLGVI_					0	0	0			REV__tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	REV__tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	920.5469848513603	1	920.545145	919.537869	2.1856	0.002012	-1.5427	-0.0014201	0.64294	0.00059185	920.5438561218525	72.97	0.3174	73.295	73.147	73.464	0.32494					21	9	3	0	0	0	0.10722	2	30506	30506;30555		46.921	2.5139	1	1703200	+		697	15165	383	388	838;839	838					0.07488143562670757
ALAVAQEGMA	10	Unmodified	_ALAVAQEGMA_					0	0	0			REV__PCCA|p.S450Qfs*3|1|0.05|ENSG00000175198|chr13:100307253-100307253|T/-|frameshift_variant	REV__PCCA|p.S450Qfs*3|1|0.05|ENSG00000175198|chr13:100307253-100307253|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.7461425662041	2	480.744585	959.474617	3.524	0.0016941	1.154	0.0005548	4.678	0.0022489	480.74514951757396	96.561	0.18169	96.666	96.573	96.755	0.10499					12	5	3	0	0	0	0.65659	1	40394	40394		20.415	1.1575	1	14446000	+		698	11146	384	389	840	840					-0.00674165216878464
ALCSRSKFL	9	Unmodified	_ALCSRSKFL_					0	0	0		ENST00000418775.1_1_X:51139469-51141200:+|nuORF	ENST00000418775.1_1_X:51139469-51141200:+|nuORF	ENST00000418775.1_1_X:51139469-51141200:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	512.2718994021416	2	512.784044	1023.55354	2.2831	0.0011707	2.0377	0.0010449	4.3208	0.0022156	512.7853107426043	63.26	0.15876	63.26	63.176	63.335	0					5	4	2	0	0	0	0.11684	1	26340	26340		7.9102	1.5561	1	244090			699	6429	385	390	841	841					0.042701068080759796
ALCYWWMGDC	10	Unmodified	_ALCYWWMGDC_					0	0	0		ENST00000358307.6_1_14:66136103-66136142:+|nuORF	ENST00000358307.6_1_14:66136103-66136142:+|nuORF	ENST00000358307.6_1_14:66136103-66136142:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	624.2382690310478	2	624.237755	1246.46096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.811	1	68.134	67.634	68.634	0.32269								0	0	0	0.66237	1	28389	28389		0.45834	0	1				700	6012	386	391	842	842					-0.15241482311989785
ALDDFSISV	9	Unmodified	_ALDDFSISV_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	966.4777709841728	1	966.477854	965.470577	1.7573	0.0016983	-0.20454	-0.00019769	1.5527	0.0015007	966.477674536329	67.467	0.3764	67.789	67.587	67.964	0.32269					19	11	2	0	0	0	0.19075	2	28253	28207;28253		34.102	7.2188	1	1221700			701	2644	387	392	843;844	844					-0.013539314389504398
ALDDFSISV	9	Unmodified	_ALDDFSISV_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	966.4802734255791	1	966.477854	965.470577	1.4986	0.0014484	1.121	0.0010834	2.6196	0.0025318	966.4781201233687	66.366	0.42691	67.755	67.507	67.934	1.3888					37	13	4	0	0	0	0.083604	1	27863	27863		54.774	6.4277	1	5567600			702	2644	387	392	845	845					-0.013539314389504398
ALDDFSISV	9	Unmodified	_ALDDFSISV_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	966.477854	965.470577	1.6573	0.0016017	1.2178	0.001177	2.8751	0.0027787	966.4778933785367	65.967	0.42764	67.875	67.649	68.076	1.9085	0.075315	0.00068697	NaN	54.774	31	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5035200			703	2644	387	392							-0.013539314389504398
ALDEKLLNI	9	Unmodified	_ALDEKLLNI_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.8051635622978	2	514.802957	1027.59136	2.1609	0.0011124	1.0557	0.0005435	3.2166	0.0016559	514.8032898090921	53.86	0.31937	53.86	53.679	53.998	0					24	9	3	0	0	0	0.046715	2	22470	22419;22470		70.332	20.399	1	1909900			704	874	388	393	846;847	847					0.0786689627452688
ALDEKLLNI	9	Unmodified	_ALDEKLLNI_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8047363162041	2	514.802957	1027.59136	1.9541	0.001006	1.5082	0.00077641	3.4623	0.0017824	514.8035876988729	53.23	0.34652	53.553	53.379	53.726	0.32283					24	10	3	0	0	0	0.03071	2	22313	22268;22313		86.332	23.759	1	2240100			705	874	388	393	848;849	849					0.0786689627452688
ALDEKLLNI	9	Unmodified	_ALDEKLLNI_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8040649294853	2	514.802957	1027.59136	1.2806	0.00065928	0.41583	0.00021407	1.6965	0.00087335	514.8031516015444	52.04	0.35513	53.436	53.265	53.62	1.3966					30	11	3	0	0	0	0.0011269	3	21793	21749;21793;21835		133.05	39.886	1	8624500			706	874	388	393	850;851;852	851					0.0786689627452688
ALDEKLLNI	9	Unmodified	_ALDEKLLNI_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8030883669853	2	514.802957	1027.59136	0.70019	0.00036046	0.29815	0.00015349	0.99834	0.00051395	514.8028888980695	51.5	0.33908	53.475	53.249	53.588	1.9753					26	11	3	0	0	0	0.00030345	2	21573	21523;21573		137.42	37.625	1	9034400			707	874	388	393	853;854	854					0.0786689627452688
ALDEVFTKV	9	Unmodified	_ALDEVFTKV_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000479589.5_1_1:212606272-212619345:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2842285037041	2	511.281857	1020.54916	2.8813	0.0014732	-0.094516	-4.8324E-05	2.7868	0.0014248	511.28255823181604	45.011	0.38115	46.376	46.149	46.53	1.3653					17	11	2	0	0	0	0.1052	1	18861	18861		47.594	23.574	1	1101400			708	2021	389	394	855	855					0.03970920866152028
ALDEVFTKV	9	Unmodified	_ALDEVFTKV_					0	0	0		ENSG00000117691|ENST00000366988|NENF;ENST00000479589.5_1_1:212606272-212619345:+|nuORF	ENSG00000117691|ENST00000366988|NENF	ENSG00000117691|ENST00000366988|NENF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2816955447197	2	511.281857	1020.54916	2.505	0.0012808	-1.1303	-0.0005779	1.3747	0.00070285	511.2812590104596	44.417	0.35114	46.377	46.193	46.544	1.9596					16	10	2	0	0	0	0.18337	1	18614	18614		34.932	17.819	1	772950			709	2021	389	394	856	856					0.03970920866152028
ALDGFLFVV	9	Unmodified	_ALDGFLFVV_					0	0	0		NCOA3|p.Q1131*|1|0.13|ENSG00000124151|chr20:47647209-47647233|GACAATCACCATCTTTTAACTCTAT/-|frameshift_variant;nc|ENSG00000124151|Q9Y6Q9-4|NCOA3;nc|ENSG00000124151|Q9Y6Q9-2|NCOA3;nc|ENSG00000124151|Q9Y6Q9-3|NCOA3;nc|ENSG00000124151|Q9Y6Q9-5|NCOA3;ENSG00000124151|ENST00000371998|NCOA3;NCOA3-EYA2|4|fusion;NCOA3-EYA2|8|fusion;NCOA3-EYA2|6|fusion;NCOA3-EYA2|2|fusion;NCOA3-EYA2|3|fusion;NCOA3-EYA2|7|fusion;NCOA3-EYA2|5|fusion;NCOA3-EYA2|1|fusion	NCOA3|p.Q1131*|1|0.13|ENSG00000124151|chr20:47647209-47647233|GACAATCACCATCTTTTAACTCTAT/-|frameshift_variant	NCOA3|p.Q1131*|1|0.13|ENSG00000124151|chr20:47647209-47647233|GACAATCACCATCTTTTAACTCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	980.5525390505791	1	980.545145	979.537869	1.4758	0.0014471	4.1753	0.0040941	5.6511	0.0055411	980.5491530382566	96.972	0.12489	96.972	96.894	97.019	0					5	3	2	0	0	0	0.19075	1	40547	40547		34.102	3.8776	1	1135000			710	2209	390	395	857	857					0.047281435626587154
ALDGLLQQV	9	Unmodified	_ALDGLLQQV_					0	0	0		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	478.7660705447197	2	478.7742	955.533846	3.0266	0.0014491	-3.6281	-0.001737	-0.60152	-0.00028799	478.7716681199029	62.561	0.29259	63.974	63.869	64.162	1.4134					13	9	2	0	0	0	0.08828	1	26191	26191		10.824	1.4408	1	3642400			711	1530	391	396	858	858					0.0543005406894963
ALDGLLQQV	9	Unmodified	_ALDGLLQQV_					0	0	0		ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	ENSG00000105656|ENST00000262809|ELL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7749206423759	2	478.7742	955.533846	3.0612	0.0014656	-0.15242	-7.2975E-05	2.9088	0.0013927	478.77361884186485	62.089	0.18201	64.046	63.968	64.15	1.9571					9	5	2	0	0	0	0.22519	1	26044	26044		30.225	5.5509	1	1445900			712	1530	391	396	859	859					0.0543005406894963
ALDIITRGF	9	Unmodified	_ALDIITRGF_					0	0	0		tr|A0A7D6VXL8|A0A7D6VXL8_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11765PE=4SV=1;tr|A0A7D7A2X2|A0A7D7A2X2_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10220PE=4SV=1	tr|A0A7D6VXL8|A0A7D6VXL8_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11765PE=4SV=1	tr|A0A7D6VXL8|A0A7D6VXL8_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11765PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	503.7158691287041	2	503.290017	1004.56548	3.5163	0.0017697	3.6163	0.0018201	7.1326	0.0035898	503.29197419984837	74.322	0.45332	75.64	75.405	75.859	1.318					30	14	3	0	0	0	0.116	1	31133	31133		2.3027	0	1	3519000			713	16985	392	397	860	860					0.06338046822907017
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	971.5758544802666	1	971.577174	970.569897	1.8199	0.0017681	-0.43376	-0.00042143	1.3861	0.0013467	971.576188943752	75.581	0.38068	75.581	75.374	75.755	0					25	11	3	0	0	0	0.023786	1	31443	31443		96.285	32.048	1	2186400			714	631	393	398	861	861					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2928344607353	2	486.292225	970.569897	1.8549	0.00090204	-0.17021	-8.2773E-05	1.6847	0.00081927	486.2924962050219	75.645	0.34885	75.645	75.406	75.755	0					20	10	3	0	0	0	0.049839	1	31474	31474		68.081	18.148	1	1700500			715	631	393	398	862	862					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	971.5789672732353	1	971.577174	970.569897	2.5441	0.0024718	-0.68048	-0.00066114	1.8636	0.0018106	971.57644778925	75.126	0.37933	75.451	75.237	75.616	0.32464					25	11	3	0	0	0	0.031377	2	31401	31401;31454		85.272	24.882	1	1531200			716	631	393	398	863;864	863					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2933837771416	2	486.292225	970.569897	3.2695	0.0015899	-0.86705	-0.00042164	2.4025	0.0011683	486.29201819194344	75.116	0.31877	75.441	75.297	75.616	0.32464					23	9	3	0	0	0	0.13873	1	31404	31404		39.957	18.211	1	2384900			717	631	393	398	865	865					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5806762576103	1	971.577174	970.569897	3.1285	0.0030396	-0.048926	-4.7536E-05	3.0796	0.002992	971.5772100464478	74.093	0.3422	75.411	75.218	75.561	1.318					26	10	3	0	0	0	0.0069529	2	31098	31055;31098		114.65	32.759	1	5787000			718	631	393	398	866;867	867					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2940551638603	2	486.292225	970.569897	3.5156	0.0017096	0.58188	0.00028296	4.0975	0.0019926	486.2926129822903	74.137	0.43262	75.455	75.218	75.651	1.318					21	13	2	0	0	0	0.049839	2	31076	31076;31123		68.081	14.558	1	4592700			719	631	393	398	868;869	868					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	971.5793945193291	1	971.577174	970.569897	2.6216	0.0025471	-0.42637	-0.00041425	2.1952	0.0021328	971.5764772765145	73.6	0.40288	75.396	75.224	75.627	1.7962					30	12	3	0	0	0	0.0044745	2	30901	30856;30901		123.45	34.547	1	4955200			720	631	393	398	870;871	871					0.08343511245789159
ALDILITNV	9	Unmodified	_ALDILITNV_					0	0	0		ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	ENSG00000028839|ENST00000237264|TBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2937805056572	2	486.292225	970.569897	2.7876	0.0013556	0.55827	0.00027148	3.3458	0.0016271	486.29258402011914	73.628	0.46356	75.424	75.163	75.627	1.7962					24	14	2	0	0	0	0.049839	1	30905	30905		68.081	18.148	1	2744800			721	631	393	398	872	872					0.08343511245789159
ALDKATVLL	9	Unmodified	_ALDKATVLL_					0	0	0		ENST00000489049.5_1_10:112647518-112650449:+|nuORF;nc|ENSG00000150593|Q53EL6-2|PDCD4;ENSG00000150593|ENST00000280154|PDCD4	ENST00000489049.5_1_10:112647518-112650449:+|nuORF	ENST00000489049.5_1_10:112647518-112650449:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2961608767509	2	472.294768	942.574983	2.5298	0.0011948	0.017756	8.386E-06	2.5476	0.0012032	472.29494320902904	42.3	0.33037	42.621	42.428	42.758	0.32058					24	10	3	0	0	0	0.031145	2	17758	17710;17758		85.642	10.333	1	4309300			722	3267	394	399	873;874	874					0.10139815108414041
ALDKDAPVPF	10	Unmodified	_ALDKDAPVPF_					0	0	0		ENSG00000158258|ENST00000458420|CLSTN2;ENST00000511524.1_1_3:139654198-140275504:+|nuORF	ENSG00000158258|ENST00000458420|CLSTN2	ENSG00000158258|ENST00000458420|CLSTN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1636840701103	2	536.787307	1071.56006	2.9148	0.0015646	-0.60876	-0.00032677	2.306	0.0012378	536.7874369879335	70.033	0.34238	71.387	71.179	71.521	1.3536					24	10	3	0	0	0	0.12475	1	29326	29326		4.3292	1.44	1	1171000			723	3496	395	400	875	875					0.027143232404114315
ALDPLADKILI	11	Unmodified	_ALDPLADKILI_					0	0	0		ENST00000489345.5_1_20:5990447-6004030:+|nuORF;ENST00000609154.1_1_20:5988006-5996237:+|nuORF;nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	591.3620483279228	2	591.360639	1180.70673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.577	1	71.577	71.077	72.077	0								0	0	0	0.54629	1	29808	29808		23.79	2.1996	1				724	1106	396	401	876	876					0.12360000405533356
ALDPLADKILI	11	Unmodified	_ALDPLADKILI_					0	0	0		ENST00000489345.5_1_20:5990447-6004030:+|nuORF;ENST00000609154.1_1_20:5988006-5996237:+|nuORF;nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3619262576103	2	591.360639	1180.70673	2.5246	0.0014929	0.66874	0.00039547	3.1933	0.0018884	591.3614034533603	69.736	0.22137	71.09	70.957	71.179	1.3536					13	6	3	0	0	0	0.12391	1	29273	29273		51.488	23.254	1	779620			725	1106	396	401	877	877					0.12360000405533356
ALDPLADKILI	11	Unmodified	_ALDPLADKILI_					0	0	0		ENST00000489345.5_1_20:5990447-6004030:+|nuORF;ENST00000609154.1_1_20:5988006-5996237:+|nuORF;nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3632079958916	2	591.360639	1180.70673	1.6519	0.00097687	-0.34271	-0.00020266	1.3092	0.00077421	591.3611460900879	69.218	0.28095	71.071	70.887	71.168	1.853					15	8	3	0	0	0	0.23777	1	29062	29062		37.075	15.484	1	649050			726	1106	396	401	878	878					0.12360000405533356
ALDPLADKILI	11	Unmodified	_ALDPLADKILI_					0	0	0		ENST00000489345.5_1_20:5990447-6004030:+|nuORF;ENST00000609154.1_1_20:5988006-5996237:+|nuORF;nc|ENSG00000088766|Q9UJA2-2|CRLS1;ENSG00000088766|ENST00000378863|CRLS1	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	ENST00000489345.5_1_20:5990447-6004030:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	591.360639	1180.70673	1.3503	0.00079854	0.30355	0.00017951	1.6539	0.00097804	591.3612722701613	70.919	0.22412	71.242	71.112	71.336	0.32359	0.10806	8.8887E-05	NaN	51.488	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	521790			727	1106	396	401							0.12360000405533356
ALDRRPDV	8	Unmodified	_ALDRRPDV_					0	0	0		ENST00000421070.1_1_1:24119069-24119183:+|nuORF	ENST00000421070.1_1_1:24119069-24119183:+|nuORF	ENST00000421070.1_1_1:24119069-24119183:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2614013552666	2	471.261791	940.509028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.458	1	60.458	59.958	60.958	0								0	0	0	1.0178	1	25214	25214		6.3541	0	1				728	6446	397	402	879	879					0.036394189862335224
ALDSGASLLHL	11	Unmodified	_ALDSGASLLHL_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	548.8061401247978	2	548.803488	1095.59242	1.6464	0.00090356	1.7004	0.00093319	3.3468	0.0018368	548.8045513174751	58.661	0.35578	58.661	58.46	58.816	0					26	10	3	0	0	0	0.026901	2	24460	24460;24500		88.954	35.121	1	5832100			729	4652	398	403	880;881	880					0.048451106434413305
ALDSGASLLHL	11	Unmodified	_ALDSGASLLHL_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.8042480349541	2	548.803488	1095.59242	1.5885	0.00087178	-0.93897	-0.00051531	0.64954	0.00035647	548.8034560788802	56.956	0.48708	58.371	58.093	58.58	1.4145					36	15	3	0	0	0	0.02632	3	23891	23842;23891;23931		92.491	35.121	1	24160000			730	4652	398	403	882;883;884	883					0.048451106434413305
ALDSGASLLHL	11	Unmodified	_ALDSGASLLHL_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8042480349541	2	548.803488	1095.59242	1.0094	0.00055397	-0.48043	-0.00026366	0.52898	0.0002903	548.8036758262242	56.394	0.36773	58.362	58.149	58.516	1.9684					35	11	4	0	0	0	0.019239	2	23648	23597;23648		99.799	37.226	1	18963000			731	4652	398	403	885;886	886					0.048451106434413305
ALDSGASLLHL	11	Unmodified	_ALDSGASLLHL_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	548.803488	1095.59242	2.403	0.0013188	0.75073	0.00041201	3.1537	0.0017308	548.8038046408151	58.147	0.35121	58.47	58.268	58.619	0.32299	0.0041925	0.00022955	NaN	99.799	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4949200			732	4652	398	403							0.048451106434413305
ALDSTNVEL	9	Unmodified	_ALDSTNVEL_					0	0	0		ENST00000487325.5_1_1:156038076-156039544:+|nuORF;ENSG00000132698|ENST00000361084|RAB25	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2450744509697	2	481.245472	960.476391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.717	1	41.027	40.527	41.527	1.3102								0	0	0	0.18991	1	16658	16658		26.884	9.9414	1				733	2546	399	404	887	887					-0.005428329272717747
ALDSTNVEL	9	Unmodified	_ALDSTNVEL_					0	0	0		ENST00000487325.5_1_1:156038076-156039544:+|nuORF;ENSG00000132698|ENST00000361084|RAB25	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	961.4847900271416	1	961.483667	960.476391	1.57	0.0015096	-3.5696	-0.0034321	-1.9995	-0.0019225	961.4797867084137	39.231	0.21441	41.068	41.007	41.221	1.8366					9	6	2	0	0	0	0.059546	1	16462	16462		64.236	22.142	1	607160			734	2546	399	404	888	888					-0.005428329272717747
ALDSTNVEL	9	Unmodified	_ALDSTNVEL_					0	0	0		ENST00000487325.5_1_1:156038076-156039544:+|nuORF;ENSG00000132698|ENST00000361084|RAB25	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	ENST00000487325.5_1_1:156038076-156039544:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	961.483667	960.476391	1.6959	0.0016306	-6.5104	-0.0062596	-4.8145	-0.0046291	961.4761277716037	39.708	0.15214	41.018	40.965	41.117	1.3102	-0.024939	-0.0018257	NaN	64.236	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	941520			735	2546	399	404							-0.005428329272717747
ALDVLCGIVL	10	Unmodified	_ALDVLCGIVL_					0	0	0			REV__nc|ENSG00000196218|P21817-3|RYR1	REV__nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7956420779228	2	508.296453	1014.57835	3.2759	0.0016651	-4.3887	-0.0022308	-1.1128	-0.00056565	508.2953744548008	62.637	0.47756	64.05	63.807	64.284	1.4134					46	15	4	0	0	0	0.70643	1	26319	26319		18.135	0	1	6397800	+		736	11621	400	405	889	889					0.07164741890778714
ALEEKQVL	8	Unmodified	_ALEEKQVL_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;TTN|p.T6904Lfs*6|1|0.08|ENSG00000155657|chr2:178723439-178723439|T/-|frameshift_variant;TTN|p.V5150Afs*3|1|0.06|ENSG00000155657|chr2:178732661-178732661|A/-|frameshift_variant;TTN|p.R4157*|1|0.07|ENSG00000155657|chr2:178739814-178739815|-/C|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2713500857353	2	465.26875	928.522947	4.3668	0.0020317	1.5796	0.00073495	5.9464	0.0027667	465.2698773902941	92.134	0.41479	93.071	92.861	93.276	0.93623					31	12	3	0	0	0	0.87935	1	38782	38782		9.3474	0	1	1384800			737	3425	401	406	890	890					0.05582651694669494
ALEGRRWH	8	Unmodified	_ALEGRRWH_					0	0	0		ENST00000527920.5_1_11:65339976-65340141:+|nuORF	ENST00000527920.5_1_11:65339976-65340141:+|nuORF	ENST00000527920.5_1_11:65339976-65340141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.1871215701103	3	342.186025	1023.53625	3.5416	0.0012119	-0.025446	-8.7073E-06	3.5161	0.0012032	342.18703621440017	87.685	0.37352	88.777	88.521	88.895	1.0918					15	11	2	0	0	0	0.88163	1	36981	36981		5.7319	0	1	808390			738	7141	402	407	891	891					0.025419473172632934
ALEPPACEH	9	Unmodified	_ALEPPACEH_					0	0	0		ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.7205383181572	2	483.72111	965.427666	2.7331	0.001322	-1.4548	-0.0007037	1.2783	0.00061834	483.71996217671955	77.535	0.28034	77.852	77.701	77.981	0.31653					15	8	2	0	0	0	0.76456	1	32431	32431		4.756	0.42677	1	930040			739	2721	403	408	892	892					-0.056430247680282264
ALEPPACEH	9	Unmodified	_ALEPPACEH_					0	0	0		ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	483.72111	965.427666	2.6706	0.0012918	-0.64385	-0.00031144	2.0267	0.00098038	483.71972677005056	76.676	0.21903	77.97	77.887	78.106	1.2938	0.11609	0.00018078	NaN	4.756	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200530			740	2721	403	408							-0.056430247680282264
ALESFLKQV	9	Unmodified	_ALESFLKQV_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7978393435478	2	517.797675	1033.5808	0.96309	0.00049869	0.43133	0.00022334	1.3944	0.00072203	517.7971747731214	51.511	0.35778	52.904	52.68	53.038	1.3938					23	11	3	0	0	0	0.010279	1	21584	21584		107.19	2.3878	1	4800400			741	5388	404	409	893	893					0.06534913620112093
ALESFLKQV	9	Unmodified	_ALESFLKQV_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7964355349541	2	517.797675	1033.5808	0.024742	1.2811E-05	1.0169	0.00052653	1.0416	0.00053934	517.7977704190793	50.882	0.34008	52.857	52.667	53.007	1.9753					26	11	3	0	0	0	0.0069529	1	21348	21348		114.65	21.827	1	5013000			742	5388	404	409	894	894					0.06534913620112093
ALESLCLQGPL	11	Unmodified	_ALESLCLQGPL_					0	0	0		nc|ENSG00000127452|Q9NXK8-2|FBXL12;ENSG00000127452|ENST00000247977|FBXL12;KNTC1-FBXL12|1|fusion	nc|ENSG00000127452|Q9NXK8-2|FBXL12	nc|ENSG00000127452|Q9NXK8-2|FBXL12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3087036013603	2	572.307549	1142.60055	2.1005	0.0012021	0.74716	0.00042761	2.8476	0.0016297	572.3071917735917	70.282	0.3786	72.12	71.881	72.26	1.8378					17	11	2	0	0	0	0.90709	1	29464	29464		9.3831	0.78985	1	1393100			743	2334	405	410	895	895					0.034949215685401214
ALESPEHGSL	10	Unmodified	_ALESPEHGSL_					0	0	0		ENSG00000007908|ENST00000333360|SELE	ENSG00000007908|ENST00000333360|SELE	ENSG00000007908|ENST00000333360|SELE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2584716677666	2	520.256371	1038.49819	4.947	0.0025737	-0.42747	-0.00022239	4.5195	0.0023513	520.255843219289	87.659	0.40443	88.75	88.553	88.958	1.0918					29	12	3	0	0	0	0.75645	1	36962	36962		15.847	1.9411	1	3168200			744	523	406	411	896	896					-0.019520281786981286
ALESTNSFYEE	11	Unmodified	_ALESTNSFYEE_					0	0	0			REV__ENST00000595279.1_1_19:3959101-3961233:-|nuORF	REV__ENST00000595279.1_1_19:3959101-3961233:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	645.2839233279228	2	645.28024	1288.54593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.108	1	72.433	71.933	72.933	0.32494								0	0	0	0.63775	1	30171	30171		5.2969	0.96765	1		+		745	10869	407	412	897	897					-0.0868041876915413
ALEVLPDVL	9	Unmodified	_ALEVLPDVL_					0	0	0		ENST00000485671.1_1_X:104993011-105009296:+|nuORF;ENSG00000189108|ENST00000372582|IL1RAPL2	ENST00000485671.1_1_X:104993011-105009296:+|nuORF	ENST00000485671.1_1_X:104993011-105009296:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7889282107353	2	484.786776	967.558998	2.7316	0.0013242	3.8072	0.0018457	6.5388	0.0031699	484.78919948482564	72.418	0.39653	73.748	73.486	73.883	1.3297					19	12	2	0	0	0	0.44535	1	30376	30376		18.135	2.2878	1	1173500			746	4896	408	413	898	898					0.07392108871522396
ALFAATLHT	9	Unmodified	_ALFAATLHT_					0	0	0			REV__ENST00000373222.3_1_20:40125942-40126167:-|nuORF	REV__ENST00000373222.3_1_20:40125942-40126167:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7670471072197	2	472.763635	943.512717	3.5531	0.0016798	-0.16207	-7.6621E-05	3.391	0.0016031	472.7634819664877	96.044	0.30283	96.446	96.336	96.638	0.40208					23	9	4	0	0	0	0.1735	1	40446	40446		36.044	3.2585	1	18658000	+		747	12694	409	414	899	899					0.03870088760083945
ALFAMYIGV	9	Unmodified	_ALFAMYIGV_					0	0	0			REV__tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	REV__tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7666808962822	2	492.764789	983.515025	1.7344	0.00085463	-0.018885	-9.3058E-06	1.7155	0.00084533	492.76489518675834	48.078	0.38312	48.078	47.839	48.222	0					24	11	3	0	0	0	0.24585	2	20104	20056;20104		28.173	3.4993	1	882850	+		748	15522	410	415	900;901	901					0.022608011735542277
ALFEDVTL	8	Unmodified	_ALFEDVTL_					0	0	0			REV__ENSG00000188976|ENST00000327044|NOC2L	REV__ENSG00000188976|ENST00000327044|NOC2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	907.4755126833916	1	907.477125	906.469849	1.6115	0.0014624	-0.3926	-0.00035628	1.2189	0.0011061	907.4765720860069	46.746	0.31817	48.128	47.995	48.314	1.3825					14	9	2	0	0	0	0.87106	1	19620	19620		14.582	0	1	692990	+		749	11595	411	416	902	902					0.012872739120098231
ALFEEQGIGV	10	Unmodified	_ALFEEQGIGV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1;ENST00000494467.1_1_9:107587931-107593243:-|nuORF	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7775756716728	2	531.776939	1061.53933	2.1633	0.0011504	-0.55677	-0.00029608	1.6065	0.00085431	531.776746906341	59.032	0.6113	60.451	60.036	60.648	1.4196					54	19	4	0	0	0	0.048317	2	24734	24734;24782		85.642	37.893	1	20543000			750	3812	412	417	903;904	903					0.011017328607749732
ALFEEQGIGV	10	Unmodified	_ALFEEQGIGV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1;ENST00000494467.1_1_9:107587931-107593243:-|nuORF	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.7777587771416	2	531.776939	1061.53933	2.1204	0.0011276	-0.73337	-0.00038999	1.387	0.00073758	531.7767942351708	58.587	0.6704	60.556	60.053	60.723	1.969					48	21	4	0	0	0	0.076926	1	24583	24583		68.081	31.954	1	13750000			751	3812	412	417	905	905					0.011017328607749732
ALFEGKVQL	9	Unmodified	_ALFEGKVQL_					0	0	0		nc|ENSG00000157796|Q8NEZ3-2|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;ENSG00000157796|ENST00000399820|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.7935668826103	2	502.792392	1003.57023	2.0352	0.0010233	0.22989	0.00011559	2.2651	0.0011389	502.7925284394652	49.718	0.37192	49.718	49.531	49.903	0					31	11	3	0	0	0	0.0069529	2	20749	20702;20749		114.65	36.5	1	5264700			752	3483	413	418	906;907	907					0.06858930965665877
ALFEGKVQL	9	Unmodified	_ALFEGKVQL_					0	0	0		nc|ENSG00000157796|Q8NEZ3-2|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;ENSG00000157796|ENST00000399820|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7938720583916	2	502.792392	1003.57023	2.2189	0.0011156	0.46768	0.00023515	2.6866	0.0013508	502.79264693225605	49.158	0.39493	49.488	49.256	49.651	0.33019					33	12	4	0	0	0	0.029061	2	20594	20594;20642		88.954	30.275	1	5642500			753	3483	413	418	908;909	908					0.06858930965665877
ALFEGKVQL	9	Unmodified	_ALFEGKVQL_					0	0	0		nc|ENSG00000157796|Q8NEZ3-2|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;ENSG00000157796|ENST00000399820|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7938720583916	2	502.792392	1003.57023	2.3987	0.0012061	0.62129	0.00031238	3.02	0.0015184	502.7924523865851	47.712	0.50737	49.094	48.759	49.266	1.3825					38	12	4	0	0	0	0.0058174	3	19950	19950;19988;20027		118.89	43.966	1	14577000			754	3483	413	418	910;911;912	910					0.06858930965665877
ALFEGKVQL	9	Unmodified	_ALFEGKVQL_					0	0	0		nc|ENSG00000157796|Q8NEZ3-2|WDR19;ENST00000512095.5_1_4:39217537-39276579:+|nuORF;ENSG00000157796|ENST00000399820|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	nc|ENSG00000157796|Q8NEZ3-2|WDR19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7934753298759	2	502.792392	1003.57023	2.2623	0.0011375	1.1516	0.00057901	3.4139	0.0017165	502.79262926429044	47.204	0.40763	49.18	48.966	49.374	1.976					38	12	4	0	0	0	0.0049178	3	19770	19725;19770;19809		122.18	43.451	1	11505000			755	3483	413	418	913;914;915	914					0.06858930965665877
ALFFQLVDV	9	Unmodified	_ALFFQLVDV_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.2989990115166	2	526.294768	1050.57498	2.8801	0.0015158	2.8889	0.0015204	5.769	0.0030362	526.2969503449661	96.13	0.16025	96.235	96.125	96.286	0.105					10	4	3	0	0	0	0.15478	1	40225	40225		38.151	17.698	1	1435200			756	2045	414	419	916	916					0.051718151084287456
ALFFQLVDV	9	Unmodified	_ALFFQLVDV_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	526.294768	1050.57498	1.7236	0.00090711	4.4967	0.0023666	6.2203	0.0032737	526.2970530725003	96.305	0.15643	96.305	96.23	96.387	0	0.15359	-0.00064468	NaN	38.151	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2482500			757	2045	414	419							0.051718151084287456
ALFFQLVDV	9	Unmodified	_ALFFQLVDV_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.294768	1050.57498	4.0076	0.0021092	6.236	0.003282	10.244	0.0053911	526.2980772821813	95.752	0.30531	96.174	96.039	96.344	0.4212	0.022669	0.0011861	NaN	38.151	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2275200			758	2045	414	419							0.051718151084287456
ALFFQLVDV	9	Unmodified	_ALFFQLVDV_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.294768	1050.57498	3.3268	0.0017509	4.6027	0.0024224	7.9295	0.0041733	526.2973681630776	95.489	0.26707	95.891	95.74	96.007	0.40208	-0.25989	-0.00053316	NaN	38.151	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3058300			759	2045	414	419							0.051718151084287456
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	922.5427123904228	1	922.539666	921.53239	1.4413	0.0013297	-1.7554	-0.0016194	-0.31405	-0.00028973	922.5379962369392	96.71	0.3223	96.71	96.571	96.894	0					37	10	5	0	0	0	0.08022	2	40403	40403;40449		56.048	9.1274	1	301320000			760	1312	415	420	917;918	917					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	461.7726623415947	2	461.773471	921.53239	1.7543	0.00081007	-1.6341	-0.00075459	0.12015	5.5481E-05	461.77263036218693	96.747	0.25951	96.747	96.602	96.862	0					19	8	4	0	0	0	0.16975	1	40430	40430		36.466	0	1	36167000			761	1312	415	420	919	919					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	922.5388061404228	1	922.539666	921.53239	2.7731	0.0025583	-3.277	-0.0030231	-0.50389	-0.00046486	922.5365689205162	96.574	0.27326	96.679	96.543	96.816	0.105					28	8	5	0	0	0	0.11074	1	40426	40426		45.75	9.2838	1	309490000			762	1312	415	420	920	920					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	922.5475952029228	1	922.539666	921.53239	3.8963	0.0035945	-2.3195	-0.0021398	1.5768	0.0014547	922.5375352337832	96.259	0.46068	96.68	96.541	97.002	0.4212					35	14	5	0	0	0	0.11074	3	40469	40469;40518;40558		45.75	9.2838	1	521930000			763	1312	415	420	921;922;923	921					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.7750732302666	2	461.773471	921.53239	4.0995	0.0018931	-2.4187	-0.0011169	1.6808	0.00077616	461.77236217550825	96.29	0.30727	96.711	96.541	96.848	0.4212					25	9	4	0	0	0	0.16975	2	40481	40481;40532		36.466	8.2929	1	22106000			764	1312	415	420	924;925	924					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	922.5486328005791	1	922.539666	921.53239	3.3161	0.0030592	-0.89271	-0.00082356	2.4234	0.0022357	922.5389530568549	96.07	0.36142	96.472	96.305	96.666	0.40208					32	11	4	0	0	0	0.08022	3	40380	40380;40417;40467		56.048	10.298	1	235240000			765	1312	415	420	926;927;928	926					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.7751037478447	2	461.773471	921.53239	3.5356	0.0016327	-1.3768	-0.00063578	2.1588	0.00099689	461.772832468537	96.044	0.33091	96.446	96.336	96.666	0.40208					25	10	3	0	0	0	0.16975	2	40393	40393;40442		36.466	8.2929	1	38064000			766	1312	415	420	929;930	929					0.06848464770837381
ALFGALFLA	9	Unmodified	_ALFGALFLA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	922.539666	921.53239	2.7751	0.0025601	0.64462	0.00059469	3.4197	0.0031548	922.5411626632622	96.739	0.1888	96.844	96.785	96.974	0.105	0.066772	0.0020355	NaN	56.048	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1394700			767	1312	415	420							0.06848464770837381
ALFGGVNAML	10	Unmodified	_ALFGGVNAML_					0	0	0			REV__ENST00000532085.1_1_11:118895622-118896243:-|nuORF	REV__ENST00000532085.1_1_11:118895622-118896243:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.2711059451103	2	496.76532	991.516088	3.4839	0.0017307	-0.76999	-0.00038251	2.7139	0.0013482	496.76871845308364	73.469	0.34614	74.787	74.558	74.904	1.318					31	10	5	0	0	0	0.12513	1	30808	30808		7.9102	1.5561	1	820780	+		768	10027	416	421	931	931					0.01999015542446614
ALFLMERS	8	Unmodified	_ALFLMERS_					0	0	0			REV__nc|ENSG00000196588|Q969V6|MRTFA	REV__nc|ENSG00000196588|Q969V6|MRTFA	MSMS	GG20161007_CRH_Patient100_A02_02	2	483.7560912966728	2	483.757495	965.500437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.598	1	96.703	96.203	97.203	0.105								0	0	0	1.0178	1	40422	40422		9.3474	0.75416	1		+		769	11641	417	422	932	932					0.016307290253962492
ALFMKQIYL	9	Unmodified	_ALFMKQIYL_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.8218261599541	2	563.820095	1125.62564	1.4575	0.00082178	1.0038	0.00056597	2.4613	0.0013877	563.8207147517446	65.057	0.34777	65.057	64.849	65.197	0					22	10	3	0	0	0	0.21592	2	27082	27082;27137		42.095	26.247	1	1532600			770	2525	418	423	933;934	933					0.0678502116177242
ALFMKQIYL	9	Unmodified	_ALFMKQIYL_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.8218871951103	2	563.820095	1125.62564	1.8195	0.0010258	0.90331	0.00050931	2.7228	0.0015352	563.8211192496881	64.41	0.2606	64.739	64.626	64.886	0.32899					19	7	3	0	0	0	0.21592	2	27015	26962;27015		42.095	16.787	1	1504100			771	2525	418	423	935;936	936					0.0678502116177242
ALFMKQIYL	9	Unmodified	_ALFMKQIYL_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8219482302666	2	563.820095	1125.62564	2.96	0.0016689	0.48202	0.00027177	3.4421	0.0019407	563.8200177845156	63.136	0.40869	64.55	64.344	64.753	1.4134					30	12	3	0	0	0	0.053939	2	26497	26447;26497		85.357	49.23	1	8612700			772	2525	418	423	937;938	938					0.0678502116177242
ALFMKQIYL	9	Unmodified	_ALFMKQIYL_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8215209841728	2	563.820095	1125.62564	2.8406	0.0016016	1.1082	0.00062484	3.9488	0.0022264	563.8201987139847	62.53	0.49297	64.475	64.195	64.688	1.9444					42	15	4	0	0	0	0.04812	3	26211	26211;26261;26298		77.984	49.497	1	7502000			773	2525	418	423	939;940;941	939					0.0678502116177242
ALFPAPLAQI	10	Unmodified	_ALFPAPLAQI_					0	0	0		ENST00000534709.1_1_11:117152603-117155864:+|nuORF;nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.8091308474541	2	520.810585	1039.60662	1.7437	0.00090815	0.087446	4.5543E-05	1.8312	0.00095369	520.8102418335676	84.194	0.40904	85.382	85.147	85.556	1.1879					25	13	2	0	0	0	0.04351	2	35289	35289;35339		81.613	45.936	1	3912200			774	3959	419	424	942;943	942					0.08839807862364069
ALFPAPLAQI	10	Unmodified	_ALFPAPLAQI_					0	0	0		ENST00000534709.1_1_11:117152603-117155864:+|nuORF;nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.8121826052666	2	520.810585	1039.60662	1.7367	0.00090448	0.83479	0.00043477	2.5715	0.0013392	520.8110001739992	83.717	0.36052	85.355	85.167	85.528	1.6379					28	11	3	0	0	0	0.059877	2	35132	35085;35132		104.8	68.755	1	4650900			775	3959	419	424	944;945	945					0.08839807862364069
ALFPAPLAQI	10	Unmodified	_ALFPAPLAQI_					0	0	0		ENST00000534709.1_1_11:117152603-117155864:+|nuORF;nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	520.810585	1039.60662	2.7942	0.0014552	-0.59097	-0.00030778	2.2032	0.0011474	520.8102646895641	85.588	0.40381	85.588	85.355	85.759	0	0.178	-0.0005458	NaN	81.613	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1435900			776	3959	419	424							0.08839807862364069
ALFPAPLAQI	10	Unmodified	_ALFPAPLAQI_					0	0	0		ENST00000534709.1_1_11:117152603-117155864:+|nuORF;nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	520.810585	1039.60662	2.7273	0.0014204	-0.91278	-0.00047538	1.8146	0.00094504	520.810292435244	85.055	0.37749	85.316	85.109	85.487	0.26083	-0.094161	-0.000881	NaN	81.613	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1303200			777	3959	419	424							0.08839807862364069
ALFPGDPPF	9	Unmodified	_ALFPGDPPF_					0	0	0		ENST00000524862.5_2_11:62474765-62476752:-|nuORF	ENST00000524862.5_2_11:62474765-62476752:-|nuORF	ENST00000524862.5_2_11:62474765-62476752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7485534548759	2	480.744911	959.475269	3.9934	0.0019198	1.5952	0.00076689	5.5886	0.0026867	480.7457938331791	96.259	0.24652	96.68	96.572	96.818	0.4212					17	7	3	0	0	0	0.34572	1	40538	40538		23.148	0	1	14124000			778	7113	420	425	946	946					-0.006090025055186743
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.7816345095634	2	450.781296	899.54804	1.8016	0.00081215	0.90694	0.00040883	2.7086	0.001221	450.7815383592402	93.568	0.3505	93.568	93.422	93.773	0					22	10	3	0	0	0	0.11074	1	39152	39152		45.75	11.563	1	1538600			779	3942	421	426	947	947					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	900.5585815310478	1	900.555316	899.54804	2.7335	0.0024616	-1.7937	-0.0016153	0.93979	0.00084633	900.5547135745508	93.103	0.35938	93.272	93.092	93.451	0.16835					16	10	2	0	0	0	0.08022	1	38987	38987		56.048	17.897	1	1908500			780	3942	421	426	948	948					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7827941775322	2	450.781296	899.54804	3.2211	0.001452	-0.04293	-1.9352E-05	3.1781	0.0014327	450.7810841479316	93.105	0.29448	93.273	93.125	93.419	0.16835					16	8	3	0	0	0	0.16975	1	38989	38989		36.466	8.2929	1	1090000			781	3942	421	426	949	949					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7829467654228	2	450.781296	899.54804	4.3691	0.0019695	-0.37471	-0.00016891	3.9944	0.0018006	450.7810361237583	92.193	0.41861	93.129	92.923	93.342	0.93623					29	12	3	0	0	0	0.08022	2	38793	38793;38848		56.048	21.861	1	3953300			782	3942	421	426	950;951	950					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	900.5590087771416	1	900.555316	899.54804	3.8832	0.003497	-0.38765	-0.0003491	3.4955	0.0031479	900.555278630938	92.24	0.41861	93.176	92.923	93.342	0.93624					27	12	3	0	0	0	0.051525	1	38881	38881		67.413	17.744	1	6481200			783	3942	421	426	952	952					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7831298708916	2	450.781296	899.54804	3.45	0.0015552	0.58386	0.00026319	4.0339	0.0018184	450.7814711197475	91.775	0.38419	93.101	92.86	93.244	1.3269					30	11	3	0	0	0	0.08022	2	38602	38602;38661		56.048	10.298	1	4859400			784	3942	421	426	953;954	953					0.09424751287883737
ALFPGVALL	9	Unmodified	_ALFPGVALL_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	900.555316	899.54804	1.7994	0.0016204	-0.069977	-6.3018E-05	1.7294	0.0015574	900.5559129961977	93.615	0.3505	93.615	93.422	93.773	0	0.33532	-0.00012683	NaN	67.413	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1472200			785	3942	421	426							0.09424751287883737
ALFPHLLQPVL	11	Unmodified	_ALFPHLLQPVL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	624.2366210818291	2	624.379166	1246.74378	1.8036	0.0011261	1.0006	0.00062475	2.8042	0.0017509	624.8817632320573	80.348	0.24854	80.639	80.529	80.778	0.29056					16	7	3	0	0	0	0.14493	1	33570	33570		10.824	4.1008	1	1000200			786	2217	422	427	955	955					0.13027716741930817
ALFPHLLQPVL	11	Unmodified	_ALFPHLLQPVL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.3799926638603	2	624.379166	1246.74378	2.4799	0.0015484	-0.059661	-3.7251E-05	2.4203	0.0015112	624.3789268360182	79.327	0.31474	80.594	80.439	80.754	1.2668					24	9	3	0	0	0	0.061385	2	33297	33297;33354		64.236	48.389	1	2277700			787	2217	422	427	956;957	956					0.13027716741930817
ALFPHLLQPVL	11	Unmodified	_ALFPHLLQPVL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.3809081912041	2	624.379166	1246.74378	1.6239	0.0010139	-0.34628	-0.00021621	1.2776	0.00079769	624.3787895849701	78.829	0.30924	80.564	80.382	80.691	1.735					23	9	3	0	0	0	0.061385	1	33078	33078		64.236	38.837	1	1687000			788	2217	422	427	958	958					0.13027716741930817
ALFPHLLQPVL	11	Unmodified	_ALFPHLLQPVL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	624.379166	1246.74378	2.2614	0.001412	-1.0893	-0.00068012	1.1721	0.00073186	624.3782410606373	80.961	0.27914	80.961	80.853	81.133	0	0.27184	-0.0011662	NaN	64.236	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	812130			789	2217	422	427							0.13027716741930817
ALFQHITAL	9	Unmodified	_ALFQHITAL_					0	0	0		nc|ENSG00000050130|Q9P055-2|JKAMP;nc|ENSG00000050130|Q9P055-3|JKAMP;ENSG00000050130|ENST00000616435|JKAMP;nc|ENSG00000050130|Q9P055-5|JKAMP	nc|ENSG00000050130|Q9P055-2|JKAMP	nc|ENSG00000050130|Q9P055-2|JKAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2948791384697	2	507.292559	1012.57057	1.037	0.00052605	0.089226	4.5264E-05	1.1262	0.00057132	507.29290757030725	53.217	0.23746	54.618	54.473	54.711	1.4005					12	7	2	0	0	0	0.053939	1	22256	22256		66.457	14.188	1	2686800			790	697	423	428	959	959					0.06478350685495116
ALFQHITAL	9	Unmodified	_ALFQHITAL_					0	0	0		nc|ENSG00000050130|Q9P055-2|JKAMP;nc|ENSG00000050130|Q9P055-3|JKAMP;ENSG00000050130|ENST00000616435|JKAMP;nc|ENSG00000050130|Q9P055-5|JKAMP	nc|ENSG00000050130|Q9P055-2|JKAMP	nc|ENSG00000050130|Q9P055-2|JKAMP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.292559	1012.57057	1.1529	0.00058487	2.8003	0.0014205	3.9532	0.0020054	507.29332805199914	52.622	0.25735	54.594	54.448	54.705	1.9722	-0.01178	0.0017703	NaN	66.457	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2432100			791	697	423	428							0.06478350685495116
ALFQRPPLI	9	Unmodified	_ALFQRPPLI_					0	0	0		nc|ENSG00000130826|O60832-2|DKC1;ENSG00000130826|ENST00000369550|DKC1	nc|ENSG00000130826|O60832-2|DKC1	nc|ENSG00000130826|O60832-2|DKC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.8267089724541	2	527.824027	1053.6335	2.0693	0.0010922	3.2558	0.0017185	5.325	0.0028107	527.8258022314698	58.412	0.45067	58.412	58.139	58.59	0					31	13	3	0	0	0	0.031324	3	24356	24306;24356;24395		85.357	53.051	1	2890600			792	2465	424	429	960;961;962	961					0.10882916473565274
ALFQRPPLI	9	Unmodified	_ALFQRPPLI_					0	0	0		nc|ENSG00000130826|O60832-2|DKC1;ENSG00000130826|ENST00000369550|DKC1	nc|ENSG00000130826|O60832-2|DKC1	nc|ENSG00000130826|O60832-2|DKC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.8267700076103	2	527.824027	1053.6335	2.5312	0.001336	3.2882	0.0017356	5.8194	0.0030716	527.825715228801	57.831	0.47729	58.154	57.887	58.364	0.32299					34	14	3	0	0	0	0.03795	3	24226	24181;24226;24277		77.984	51.101	1	2828300			793	2465	424	429	963;964;965	964					0.10882916473565274
ALFQRPPLI	9	Unmodified	_ALFQRPPLI_					0	0	0		nc|ENSG00000130826|O60832-2|DKC1;ENSG00000130826|ENST00000369550|DKC1	nc|ENSG00000130826|O60832-2|DKC1	nc|ENSG00000130826|O60832-2|DKC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.8251220583916	2	527.824027	1053.6335	1.2822	0.00067676	3.593	0.0018965	4.8752	0.0025732	527.8256775082821	56.642	0.61612	58.057	57.753	58.369	1.4145					36	19	3	0	0	0	0.006164	2	23740	23687;23740		117.6	71.578	1	6017600			794	2465	424	429	966;967	967					0.10882916473565274
ALFQRPPLI	9	Unmodified	_ALFQRPPLI_					0	0	0		nc|ENSG00000130826|O60832-2|DKC1;ENSG00000130826|ENST00000369550|DKC1	nc|ENSG00000130826|O60832-2|DKC1	nc|ENSG00000130826|O60832-2|DKC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.8247558474541	2	527.824027	1053.6335	1.2045	0.00063574	2.4683	0.0013028	3.6727	0.0019385	527.8249902661855	55.993	0.3997	57.962	57.78	58.18	1.9684					28	12	3	0	0	0	0.006164	2	23508	23462;23508		117.6	71.578	1	6281400			795	2465	424	429	968;969	969					0.10882916473565274
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.3007079958916	2	481.300719	960.586885	1.9481	0.00093764	-2.3753	-0.0011432	-0.42718	-0.0002056	481.29928232781737	72.968	0.24965	72.968	72.84	73.09	0					12	7	2	0	0	0	0.87803	1	30381	30381		10.183	0	1	711990	+		796	11699	425	430	970	970					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.3022338747978	2	481.300719	960.586885	1.9627	0.00094465	2.4076	0.0011588	4.3703	0.0021034	481.3019239114094	79.006	0.76508	79.006	78.441	79.206	0					79	24	4	0	0	0	0.87803	1	32711	32711		10.183	0	1	135410000	+		797	11699	425	430	971	971					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.3029357790947	2	481.300719	960.586885	2.769	0.0013327	-1.2387	-0.00059619	1.5302	0.00073651	481.3001024173884	72.497	0.28047	72.822	72.674	72.954	0.32494					14	8	2	0	0	0	0.87803	1	30327	30327		10.183	0	1	950610	+		798	11699	425	430	972	972					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.3029968142509	2	481.300719	960.586885	2.6309	0.0012662	2.9258	0.0014082	5.5567	0.0026744	481.3026090735043	78.094	0.28886	78.404	78.259	78.548	0.30933					11	8	2	0	0	0	0.87803	1	32658	32658		10.183	0	1	1260200	+		799	11699	425	430	973	973					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.3024780154228	2	481.300719	960.586885	2.6489	0.0012749	-1.0821	-0.00052081	1.5668	0.00075412	481.30049326989155	77.113	0.38334	78.394	78.217	78.601	1.2809					26	11	3	0	0	0	0.87106	1	32418	32418		14.582	1.0738	1	4495000	+		800	11699	425	430	974	974					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.3016845583916	2	481.300719	960.586885	2.1959	0.0010569	-1.2241	-0.00058915	0.97188	0.00046777	481.300533389062	76.67	0.35335	78.437	78.222	78.576	1.7672					23	10	3	0	0	0	0.80415	1	32164	32164		20.871	3.9289	1	3178600	+		801	11699	425	430	975	975					0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	481.300719	960.586885	1.9481	0.00093764	-2.3753	-0.0011432	-0.42718	-0.0002056	481.29928232781737	72.968	0.24965	72.968	72.84	73.09	0	0.16645	-0.0010166	NaN	10.183	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	711990	+		802	11699	425	430							0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	481.300719	960.586885	2.769	0.0013327	-1.2387	-0.00059619	1.5302	0.00073651	481.3001024173884	72.497	0.28047	72.822	72.674	72.954	0.32494	0.020698	7.7509E-05	NaN	10.183	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	950610	+		803	11699	425	430							0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	481.300719	960.586885	2.6309	0.0012662	2.9258	0.0014082	5.5567	0.0026744	481.3026090735043	78.094	0.28886	78.404	78.259	78.548	0.30933	-0.016488	0.0031865	NaN	20.871	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1260200	+		804	11699	425	430							0.10501476642286889
ALFRRVLS	8	Unmodified	_ALFRRVLS_					0	0	0			REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	REV__nc|ENSG00000198003|A5D8V7-2|ODAD3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	481.300719	960.586885	2.3383	0.0011254	-0.91873	-0.00044218	1.4196	0.00068324	481.3005902946064	71.273	0.33032	72.614	72.482	72.812	1.3415	-0.18715	0.00038552	NaN	10.183	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1757300	+		805	11699	425	430							0.10501476642286889
ALFSNLVEI	9	Unmodified	_ALFSNLVEI_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2846557497978	2	503.2844	1004.55425	3.3891	0.0017057	-2.9959	-0.0015078	0.3932	0.00019789	503.2819772358889	82.661	0.25263	83.874	83.731	83.983	1.2125					13	7	2	0	0	0	0.19075	1	34703	34703		34.102	8.7031	1	1231800			806	4734	426	431	976	976					0.052152247287722275
ALFSNLVEI	9	Unmodified	_ALFSNLVEI_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.2844	1004.55425	3.2109	0.001616	-3.189	-0.001605	0.021823	1.0983E-05	503.2817214095688	82.204	0.3154	83.874	83.671	83.986	1.67	0.00020305	-0.00010126	NaN	34.102	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	840180			807	4734	426	431							0.052152247287722275
ALFSQDISV	9	Unmodified	_ALFSQDISV_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2602722048759	2	490.258382	978.502212	2.8679	0.001406	-0.14617	-7.1663E-05	2.7217	0.0013343	490.25810538213716	60.677	0.25329	61.005	60.887	61.14	0.32809					10	7	2	0	0	0	0.34572	1	25428	25428		23.148	1.4018	1	417300			808	3294	427	432	977	977					0.012100613149982564
ALFSQDISV	9	Unmodified	_ALFSQDISV_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2582580447197	2	490.258382	978.502212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.614	1	61.034	60.534	61.534	1.4196								0	0	0	0.24103	1	24997	24997		23.148	1.4018	1				809	3294	427	432	978	978					0.012100613149982564
ALFSQDISV	9	Unmodified	_ALFSQDISV_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	490.258382	978.502212	2.6185	0.0012837	0.21715	0.00010646	2.8356	0.0013902	490.25784806042714	59.113	0.22258	61.082	60.971	61.193	1.969	-0.016345	-0.00043159	NaN	23.148	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	900010			810	3294	427	432							0.012100613149982564
ALFVNINKV	9	Unmodified	_ALFVNINKV_					0	0	0		tr|A0A7D6ZI58|A0A7D6ZI58_9CLOTCarbohydrateABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02955PE=3SV=1	tr|A0A7D6ZI58|A0A7D6ZI58_9CLOTCarbohydrateABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02955PE=3SV=1	tr|A0A7D6ZI58|A0A7D6ZI58_9CLOTCarbohydrateABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02955PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3066284060478	2	509.30821	1016.60187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.872	1	52.198	51.698	52.698	0.32553								0	0	0	0.36184	1	21730	21730		12.532	0.89125	1				811	17098	428	433	979	979					0.09422923719603205
ALFVRLLALA	10	Unmodified	_ALFVRLLALA_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000504185.5_1_5:135364744-135380547:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8581420779228	2	543.855327	1085.6961	3.8912	0.0021162	0.26729	0.00014537	4.1585	0.0022616	543.8555259935649	82.159	0.40724	83.371	83.13	83.537	1.2125					29	12	3	0	0	0	0.19223	2	34460	34460;34509		49.933	29.602	1	1621600			812	2115	429	434	980;981	980					0.1566806254174935
ALFVRLLALA	10	Unmodified	_ALFVRLLALA_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000504185.5_1_5:135364744-135380547:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8567382693291	2	543.855327	1085.6961	3.9438	0.0021448	-0.49037	-0.00026669	3.4534	0.0018781	543.8549960531244	81.609	0.43298	83.305	83.106	83.539	1.6959					29	13	3	0	0	0	0.21003	2	34219	34219;34287		47.749	24.897	1	1745000			813	2115	429	434	982;983	982					0.1566806254174935
ALFVRLLALA	10	Unmodified	_ALFVRLLALA_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000504185.5_1_5:135364744-135380547:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	543.855327	1085.6961	2.325	0.0012644	1.1547	0.00062796	3.4796	0.0018924	543.8555700425162	83.145	0.3395	83.415	83.306	83.646	0.27029	0.051397	0.00097396	NaN	49.933	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	839890			814	2115	429	434							0.1566806254174935
ALGALPLP	8	Unmodified	_ALGALPLP_					0	0	0			REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2419616580009	2	376.239264	750.463976	1.4586	0.00054878	3.0092	0.0011322	4.4678	0.001681	376.2403846906749	39.71	0.58486	41.02	40.715	41.3	1.3102					39	19	3	0	0	0	0.88958	1	16610	16610		2.8892	0	1	3495900	+		815	13307	430	435	984	984					0.07876220191008088
ALGALPLP	8	Unmodified	_ALGALPLP_					0	0	0			REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	376.239264	750.463976	-0.48548	-0.00018266	3.0165	0.0011349	2.5311	0.00095228	376.2399180553394	41.234	0.28937	41.234	41.081	41.37	0	0.15529	-0.00013506	NaN	2.8892	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342280	+		816	13307	430	435							0.07876220191008088
ALGALPLP	8	Unmodified	_ALGALPLP_					0	0	0			REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	376.239264	750.463976	1.5791	0.00059411	3.7643	0.0014163	5.3434	0.0020104	376.2403265699685	40.654	0.28291	40.971	40.857	41.14	0.31683	-0.10797	0.00042765	NaN	2.8892	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487470	+		817	13307	430	435							0.07876220191008088
ALGALPLP	8	Unmodified	_ALGALPLP_					0	0	0			REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	376.239264	750.463976	1.2113	0.00045575	3.3125	0.0012463	4.5238	0.001702	376.2404461861286	39.253	0.81751	41.09	40.558	41.376	1.8366	0.011228	8.7619E-05	NaN	2.8892	53	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2879700	+		818	13307	430	435							0.07876220191008088
ALGAQILLVQR	11	Unmodified	_ALGAQILLVQR_					0	0	0		ENST00000467459.5_1_1:45794980-45797699:-|nuORF;ENST00000482094.5_1_1:45794980-45797552:-|nuORF;ENSG00000132781|ENST00000456914|MUTYH;nc|ENSG00000132781|Q9UIF7-5|MUTYH;nc|ENSG00000132781|Q9UIF7-4|MUTYH;nc|ENSG00000132781|Q9UIF7-3|MUTYH;nc|ENSG00000132781|Q9UIF7-2|MUTYH;nc|ENSG00000132781|Q9UIF7|MUTYH	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3736450076103	2	591.371872	1180.72919	2.7834	0.001646	0.48643	0.00028766	3.2699	0.0019337	591.3722905623957	79.479	0.34315	80.73	80.551	80.895	1.2512					26	10	3	0	0	0	0.42228	1	33390	33390		26.268	5.8536	1	2387500			819	2547	431	436	985	985					0.14605644593802936
ALGAQILLVQR	11	Unmodified	_ALGAQILLVQR_					0	0	0		ENST00000467459.5_1_1:45794980-45797699:-|nuORF;ENST00000482094.5_1_1:45794980-45797552:-|nuORF;ENSG00000132781|ENST00000456914|MUTYH;nc|ENSG00000132781|Q9UIF7-5|MUTYH;nc|ENSG00000132781|Q9UIF7-4|MUTYH;nc|ENSG00000132781|Q9UIF7-3|MUTYH;nc|ENSG00000132781|Q9UIF7-2|MUTYH;nc|ENSG00000132781|Q9UIF7|MUTYH	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3744384646416	2	591.371872	1180.72919	2.0931	0.0012378	1.4735	0.00087138	3.5666	0.0021092	591.3728472748866	78.982	0.30737	80.717	80.506	80.814	1.735					23	9	3	0	0	0	0.42228	1	33100	33100		26.268	4.7312	1	2257700			820	2547	431	436	986	986					0.14605644593802936
ALGAQILLVQR	11	Unmodified	_ALGAQILLVQR_					0	0	0		ENST00000467459.5_1_1:45794980-45797699:-|nuORF;ENST00000482094.5_1_1:45794980-45797552:-|nuORF;ENSG00000132781|ENST00000456914|MUTYH;nc|ENSG00000132781|Q9UIF7-5|MUTYH;nc|ENSG00000132781|Q9UIF7-4|MUTYH;nc|ENSG00000132781|Q9UIF7-3|MUTYH;nc|ENSG00000132781|Q9UIF7-2|MUTYH;nc|ENSG00000132781|Q9UIF7|MUTYH	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	591.371872	1180.72919	2.193	0.0012969	-0.46157	-0.00027296	1.7314	0.0010239	591.3717568353632	81.15	0.34116	81.15	80.947	81.288	0	0.29987	-0.001282	NaN	26.268	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	996580			821	2547	431	436							0.14605644593802936
ALGAQILLVQR	11	Unmodified	_ALGAQILLVQR_					0	0	0		ENST00000467459.5_1_1:45794980-45797699:-|nuORF;ENST00000482094.5_1_1:45794980-45797552:-|nuORF;ENSG00000132781|ENST00000456914|MUTYH;nc|ENSG00000132781|Q9UIF7-5|MUTYH;nc|ENSG00000132781|Q9UIF7-4|MUTYH;nc|ENSG00000132781|Q9UIF7-3|MUTYH;nc|ENSG00000132781|Q9UIF7-2|MUTYH;nc|ENSG00000132781|Q9UIF7|MUTYH	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	ENST00000467459.5_1_1:45794980-45797699:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	591.371872	1180.72919	1.8183	0.0010753	1.2717	0.00075204	3.09	0.0018273	591.3729753319116	80.513	0.2795	80.804	80.685	80.964	0.29056	-0.046648	0.00076802	NaN	26.268	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	943940			822	2547	431	436							0.14605644593802936
ALGATFHL	8	Unmodified	_ALGATFHL_					0	0	0		ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	ENSG00000187097|ENST00000334696|ENTPD5	MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2309448122978	2	415.231971	828.449388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.74	1	31.538	31.038	32.038	1.7987								0	0	0	1.0178	1	12466	12466		6.3541	0	1				823	4817	432	437	987	987					0.028301480428467585
ALGCVVFLS	9	Unmodified	_ALGCVVFLS_					0	0	0			REV__tr|A0A553SH59|A0A553SH59_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_12175PE=3SV=1	REV__tr|A0A553SH59|A0A553SH59_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_12175PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	908.4921142458916	1	908.491001	907.483725	1.7603	0.0015992	0.024379	2.2148E-05	1.7847	0.0016214	908.4912336718392	75.412	0.38054	75.412	75.216	75.597	0					33	11	4	0	0	0	0.10722	1	31444	31444		46.921	0	1	5646100	+		824	14780	433	438	988	988					0.02628228139451494
ALGDLGLTRP	10	Unmodified	_ALGDLGLTRP_					0	0	0		ENSG00000231274|ENST00000612221|SBK3	ENSG00000231274|ENST00000612221|SBK3	ENSG00000231274|ENST00000612221|SBK3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.3083068728447	2	506.792924	1011.57129	2.7722	0.0014049	-1.78	-0.0009021	0.99217	0.00050283	507.29469881826077	77.61	0.41412	78.891	78.663	79.077	1.2809					25	12	3	0	0	0	0.1245	1	32483	32483		15.847	0	1	1301300			825	5305	434	439	989	989					0.06597145334558263
ALGERPWHL	9	Unmodified	_ALGERPWHL_					0	0	0			REV__nc|ENSG00000197558|A2VEC9|SSPOP	REV__nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7987548708916	2	539.793258	1077.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.454	1	94.731	94.231	95.231	1.277								0	0	0	0.35192	1	39322	39322		13.508	1.8676	1		+		826	14523	435	440	990	990					0.03627984774266224
ALGIAFWLY	9	Unmodified	_ALGIAFWLY_					0	0	0			REV__ENSG00000177108|ENST00000319374|ZDHHC22	REV__ENSG00000177108|ENST00000319374|ZDHHC22	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	527.7364990115166	2	527.292028	1052.5695	2.0484	0.0010801	-2.1888	-0.0011541	-0.14042	-7.4045E-05	527.2906970438607	62.799	0.18689	63.129	63.006	63.193	0.32974					7	5	2	0	0	0	0.11109	1	26283	26283		14.582	0.67564	1	246990	+		827	11207	436	441	991	991					0.04532136316629476
ALGKPGHK	8	Unmodified	_ALGKPGHK_					0	0	0			REV__ENSG00000240654|ENST00000332018|C1QTNF9	REV__ENSG00000240654|ENST00000332018|C1QTNF9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	404.8268005251884	2	404.245412	806.476272	-0.88153	-0.00035635	2.9749	0.0012026	2.0934	0.00084624	404.24702371822315	13.472	0.21794	13.472	13.361	13.579	0					9	6	2	0	0	0	2.3239	1	5553	5553		5.2307	2.6532	1	680100	+		828	11822	437	442	992	992					0.06529256654039273
ALGKVLLFV	9	Unmodified	_ALGKVLLFV_					0	0	0			REV__Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|25|3|anti-sense	REV__Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|25|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.3184387087822	2	480.318046	958.621539	1.9478	0.00093556	0.37839	0.00018175	2.3262	0.0011173	480.3182978870639	72.316	0.31865	72.316	72.173	72.492	0					21	9	3	0	0	0	0.46905	1	30106	30106		16.942	2.3606	1	1358300	+		829	14678	438	443	993	993					0.14057299730382056
ALGKVLLFV	9	Unmodified	_ALGKVLLFV_					0	0	0			REV__Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|25|3|anti-sense	REV__Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|25|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	480.318046	958.621539	1.9478	0.00093556	0.37839	0.00018175	2.3262	0.0011173	480.3182978870639	72.316	0.31865	72.316	72.173	72.492	0	0.17826	0.00041321	NaN	16.942	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1358300	+		830	14678	438	443							0.14057299730382056
ALGLEFALPAI	11	Unmodified	_ALGLEFALPAI_					0	0	0		tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3300659060478	2	557.828975	1113.6434	1.0624	0.00059262	-0.7645	-0.00042646	0.29786	0.00016615	557.828589193544	70.364	0.23929	70.364	70.21	70.449	0					10	7	2	0	0	0	0.83203	1	29304	29304		13.906	0	1	387390			831	16588	439	444	994	994					0.09112059688254703
ALGLFFALA	9	Unmodified	_ALGLFFALA_					0	0	0			REV__ENST00000222718.6_1_7:27142143-27142227:-|nuORF	REV__ENST00000222718.6_1_7:27142143-27142227:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	922.5395385622978	1	922.539666	921.53239	2.7731	0.0025583	-3.277	-0.0030231	-0.50389	-0.00046486	922.5365689205162	96.574	0.27326	96.679	96.543	96.816	0.105					28	8	5	0	0	0	0.16975	1	40376	40376		36.466	0	1	309490000	+		832	12083	440	445	995	995					0.06848464770837381
ALGLVLIKKH	10	Unmodified	_ALGLVLIKKH_					0	0	0			REV__tr|A0A553SPC6|A0A553SPC6_NIACIUDP-N-acetylmuramoylalanine--D-glutamateligaseOS=NialliacirculansOX=1397GN=murDPE=3SV=1	REV__tr|A0A553SPC6|A0A553SPC6_NIACIUDP-N-acetylmuramoylalanine--D-glutamateligaseOS=NialliacirculansOX=1397GN=murDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1091.740771472454	1	1091.72993	1090.72265	0.48084	0.00052495	4.301	0.0046956	4.7819	0.0052205	1091.7339692272394	57.311	0.18607	58.726	58.607	58.794	1.4145					9	6	2	0	0	0	0.87343	1	24035	24035		4.3292	2.485	1	3120600	+		833	15083	441	446	996	996					0.18091751433075842
ALGMRLLNQ	9	Unmodified	_ALGMRLLNQ_					0	0	0			REV__nc|ENSG00000189430|O76036-4|NCR1	REV__nc|ENSG00000189430|O76036-4|NCR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2919799685478	2	508.289494	1014.56443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.608	1	44.608	44.108	45.108	0								0	0	0	0.40188	1	18667	18667		8.5933	1.304	1		+		834	11613	442	447	997	997					0.05773509182347425
ALGMRLLNQ	9	Unmodified	_ALGMRLLNQ_					0	0	0			REV__nc|ENSG00000189430|O76036-4|NCR1	REV__nc|ENSG00000189430|O76036-4|NCR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2917358279228	2	508.289494	1014.56443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.996	1	44.32	43.82	44.82	0.32389								0	0	0	0.40188	1	18468	18468		8.5933	1.304	1		+		835	11613	442	447	998	998					0.05773509182347425
ALGQWHAQL	9	Unmodified	_ALGQWHAQL_					0	0	0			REV__PPP2R2A-DHTKD1|1|fusion	REV__PPP2R2A-DHTKD1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2720825076103	2	512.272158	1022.52976	2.3017	0.0011791	-3.1463	-0.0016118	-0.84459	-0.00043266	512.2709571418361	63.135	0.31432	63.135	62.957	63.272	0					15	9	2	0	0	0	0.22519	2	26289	26289;26340		30.225	5.5509	1	1080300	+		836	11316	443	448	999;1000	999					0.019400093658759943
ALGQWHAQL	9	Unmodified	_ALGQWHAQL_					0	0	0			REV__PPP2R2A-DHTKD1|1|fusion	REV__PPP2R2A-DHTKD1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.2720214724541	2	512.272158	1022.52976	2.0426	0.0010464	-3.1229	-0.0015998	-1.0803	-0.00055341	512.2707359285747	62.7	0.34219	63.03	62.819	63.161	0.32974					17	10	2	0	0	0	0.11478	1	26286	26286		44.407	8.28	1	1065000	+		837	11316	443	448	1001	1001					0.019400093658759943
ALGQWHAQL	9	Unmodified	_ALGQWHAQL_					0	0	0			REV__PPP2R2A-DHTKD1|1|fusion	REV__PPP2R2A-DHTKD1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	512.272158	1022.52976	2.3017	0.0011791	-3.1463	-0.0016118	-0.84459	-0.00043266	512.2709571418361	63.135	0.31432	63.135	62.957	63.272	0	0.052562	-1.2828E-05	NaN	44.407	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1080300	+		838	11316	443	448							0.019400093658759943
ALGQWHAQL	9	Unmodified	_ALGQWHAQL_					0	0	0			REV__PPP2R2A-DHTKD1|1|fusion	REV__PPP2R2A-DHTKD1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	512.272158	1022.52976	2.0426	0.0010464	-3.1229	-0.0015998	-1.0803	-0.00055341	512.2707359285747	62.7	0.34219	63.03	62.819	63.161	0.32974	-0.052562	1.1199E-05	NaN	44.407	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1065000	+		839	11316	443	448							0.019400093658759943
ALGSSWIISV	10	Unmodified	_ALGSSWIISV_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2;nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7911254763603	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.298	1	80.298	79.798	80.798	0								0	0	0	0.58703	1	33437	33437		21.747	3.6117	1				840	4088	444	449	1002	1002					0.05062627103052364
ALGSSWIISV	10	Unmodified	_ALGSSWIISV_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2;nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7905761599541	2	516.78985	1031.56515	2.2454	0.0011604	0.60172	0.00031096	2.8471	0.0014714	516.7895187151346	78.253	0.80824	79.988	79.542	80.35	1.735					52	25	4	0	0	0	0.09859	2	32804	32804;32855		64.236	14.303	1	4183900			841	4088	444	449	1003;1004	1003					0.05062627103052364
ALGSSWIISV	10	Unmodified	_ALGSSWIISV_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2;nc|ENSG00000169398|Q05397-2|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	516.78985	1031.56515	2.9739	0.0015369	0.81143	0.00041934	3.7854	0.0019562	516.7900030441491	78.769	1.0257	80.036	79.634	80.66	1.2668	0.023796	0.00011413	NaN	64.236	44	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3431900			842	4088	444	449							0.05062627103052364
ALGSVPGG	8	Unmodified	_ALGSVPGG_					0	0	0		ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3565551638603	1	657.356616	656.34934	0.96372	0.00063351	0.86674	0.00056976	1.8305	0.0012033	657.357169374891	17.318	1.1548	17.318	16.531	17.686	0					51	36	2	0	0	0	0.87935	1	7115	7115		9.3474	0	1	391120			843	4942	445	450	1005	1005					0.007419107090527177
ALGSVPGG	8	Unmodified	_ALGSVPGG_					0	0	0		ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2;nc|ENSG00000196498|Q9Y618-5|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.3585082888603	1	657.356616	656.34934	0.19919	0.00013094	1.6442	0.0010808	1.8434	0.0012118	657.357539017275	16.257	0.69509	17.297	16.861	17.556	1.0392					30	27	2	0	0	0	0.87935	1	6731	6731		9.3474	0	1	668670			844	4942	445	450	1006	1006					0.007419107090527177
ALGTILTTL	9	Unmodified	_ALGTILTTL_					0	0	0			REV__nc|ENSG807|P61550|ERVS71-1	REV__nc|ENSG807|P61550|ERVS71-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.7823974490166	2	451.781493	901.548434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.607	1	66.607	66.107	67.107	0								0	0	0	0.35192	1	27743	27743		13.508	0.97634	1		+		845	14578	446	451	1007	1007					0.09372126217078858
ALGWWPTPA	9	Unmodified	_ALGWWPTPA_					0	0	0		ENST00000596686.5_1_19:46273741-46282867:-|nuORF;nc|ENSG00000104936|Q09013-15|DMPK;nc|ENSG00000104936|Q09013-16|DMPK	ENST00000596686.5_1_19:46273741-46282867:-|nuORF	ENST00000596686.5_1_19:46273741-46282867:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7572204470634	2	499.758352	997.502152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.78	1	57.749	57.249	58.249	1.9684								0	0	0	0.39421	1	23391	23391		9.3474	0	1				846	7521	447	452	1008	1008					0.0033010610563906084
ALHCLALTSS	10	Unmodified	_ALHCLALTSS_					0	0	0			REV__nc|ENSG00000141401|O14732-2|IMPA2	REV__nc|ENSG00000141401|O14732-2|IMPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1766540408134	3	339.179548	1014.51682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.451	1	20.451	19.951	20.951	0								0	0	0	0.66222	1	8502	8502		0.69767	0.29695	1		+		847	10144	448	453	1009	1009					0.010138101914776598
ALHDILTEI	9	Unmodified	_ALHDILTEI_					0	0	0		nc|ENSG00000111445|P40937-2|RFC5;ENSG00000111445|ENST00000454402|RFC5	nc|ENSG00000111445|P40937-2|RFC5	nc|ENSG00000111445|P40937-2|RFC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7875854372978	2	512.787307	1023.56006	2.3435	0.0012017	0.2496	0.00012799	2.5931	0.0013297	512.7874096954928	60.403	0.38004	60.403	60.257	60.637	0					30	11	3	0	0	0	0.042029	2	25184	25184;25233		74.423	26.077	1	2604500			848	1738	449	454	1010;1011	1010					0.04922323240418791
ALHDILTEI	9	Unmodified	_ALHDILTEI_					0	0	0		nc|ENSG00000111445|P40937-2|RFC5;ENSG00000111445|ENST00000454402|RFC5	nc|ENSG00000111445|P40937-2|RFC5	nc|ENSG00000111445|P40937-2|RFC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7882568240166	2	512.787307	1023.56006	2.4683	0.0012657	-0.38511	-0.00019748	2.0832	0.0010682	512.7869487538684	59.818	0.3541	60.146	59.966	60.32	0.32809					28	11	3	0	0	0	0.051699	3	25083	25033;25083;25132		67.344	16.489	1	3035900			849	1738	449	454	1012;1013;1014	1013					0.04922323240418791
ALHDILTEI	9	Unmodified	_ALHDILTEI_					0	0	0		nc|ENSG00000111445|P40937-2|RFC5;ENSG00000111445|ENST00000454402|RFC5	nc|ENSG00000111445|P40937-2|RFC5	nc|ENSG00000111445|P40937-2|RFC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7890502810478	2	512.787307	1023.56006	1.6893	0.00086626	1.4327	0.00073469	3.1221	0.0016009	512.7876913375973	58.665	0.31906	60.083	59.941	60.26	1.4181					22	9	3	0	0	0	0.022807	1	24614	24614		97.075	35.717	1	5689300			850	1738	449	454	1015	1015					0.04922323240418791
ALHDILTEI	9	Unmodified	_ALHDILTEI_					0	0	0		nc|ENSG00000111445|P40937-2|RFC5;ENSG00000111445|ENST00000454402|RFC5	nc|ENSG00000111445|P40937-2|RFC5	nc|ENSG00000111445|P40937-2|RFC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7876464724541	2	512.787307	1023.56006	1.4203	0.00072832	1.243	0.0006374	2.6633	0.0013657	512.7873263420211	58.099	0.40841	60.068	59.901	60.31	1.969					28	12	3	0	0	0	0.031324	2	24355	24355;24404		85.357	34.502	1	8257200			851	1738	449	454	1016;1017	1016					0.04922323240418791
ALHDQLFYL	9	Unmodified	_ALHDQLFYL_					0	0	0		ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	560.2926513552666	2	560.295299	1118.57605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.684	1	62.684	62.184	63.184	0								0	0	0	0.34787	1	26135	26135		13.906	1.3745	1				852	3128	450	455	1018	1018					0.02150029477343196
ALHDQLFYL	9	Unmodified	_ALHDQLFYL_					0	0	0		ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.2934448122978	2	560.295299	1118.57605	1.849	0.001036	-2.0318	-0.0011384	-0.18289	-0.00010247	560.2939656821501	62.102	0.28365	62.432	62.259	62.542	0.32974					14	8	2	0	0	0	0.35391	1	26013	26013		22.736	5.6234	1	654610			853	3128	450	455	1019	1019					0.02150029477343196
ALHHAVIFL	9	Unmodified	_ALHHAVIFL_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1;nc|ENSG00000099219|Q7Z2K6-2|ERMP1;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8046447634697	2	510.803094	1019.59164	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.061	1	40.357	39.857	40.857	1.2961								0	0	0	0.043116	1	16388	16388		45.75	17.263	1				854	1202;6777	451	456	1020	1020					0.08262360785033707
ALHWFLNQV	9	Unmodified	_ALHWFLNQV_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.3074828982353	2	564.303458	1126.59236	1.3648	0.00077017	2.644	0.001492	4.0088	0.0022622	564.305536374906	65.939	0.34951	65.939	65.774	66.123	0					17	10	2	0	0	0	0.51832	1	27486	27486		14.582	10.252	1	617750			855	1922	452	457	1021	1021					0.034131554340547154
ALHWFLNQV	9	Unmodified	_ALHWFLNQV_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3067504763603	2	564.303458	1126.59236	1.8287	0.0010319	1.5087	0.00085135	3.3374	0.0018833	564.3045785804285	65.343	0.34818	65.67	65.485	65.833	0.32689					17	10	2	0	0	0	0.51832	1	27357	27357		14.582	11.3	1	605910			856	1922	452	457	1022	1022					0.034131554340547154
ALHWFLNQV	9	Unmodified	_ALHWFLNQV_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	564.303458	1126.59236	2.654	0.0014977	1.7223	0.00097187	4.3763	0.0024696	564.3041085271396	64.074	0.34526	65.481	65.305	65.65	1.4071	-0.15786	3.3872E-05	NaN	14.582	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1416300			857	1922	452	457							0.034131554340547154
ALHWFLNQV	9	Unmodified	_ALHWFLNQV_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.303458	1126.59236	2.6819	0.0015134	1.1247	0.0006347	3.8067	0.0021481	564.3043006781959	63.523	0.31709	65.467	65.312	65.629	1.9444	-0.17209	-0.00064048	NaN	14.582	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1431300			858	1922	452	457							0.034131554340547154
ALIDRMVNL	9	Unmodified	_ALIDRMVNL_					0	0	0		ENSG00000175197|ENST00000346473|DDIT3;nc|ENSG00000285133|P35638-2|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7994262576103	2	522.797152	1043.57975	2.2589	0.0011809	1.3625	0.00071232	3.6214	0.0018933	522.7976910531592	55.496	0.28093	55.817	55.707	55.988	0.32088					11	8	2	0	0	0	0.060242	1	23240	23240		63.961	10.385	1	1007000			859	4360	453	458	1023	1023					0.059703759795411315
ALIDRMVNL	9	Unmodified	_ALIDRMVNL_					0	0	0		ENSG00000175197|ENST00000346473|DDIT3;nc|ENSG00000285133|P35638-2|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7983886599541	2	522.797152	1043.57975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.275	1	55.68	55.18	56.18	1.4048								0	0	0	0.025933	1	22718	22718		82.529	27.756	1				860	4360	453	458	1024	1024					0.059703759795411315
ALIDRMVNL	9	Unmodified	_ALIDRMVNL_					0	0	0		ENSG00000175197|ENST00000346473|DDIT3;nc|ENSG00000285133|P35638-2|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7986328005791	2	522.797152	1043.57975	1.2084	0.00063177	2.6065	0.0013627	3.815	0.0019945	522.7973696135331	53.839	0.34447	55.808	55.658	56.003	1.9697					21	10	3	0	0	0	0.033102	2	22538	22538;22603		82.529	14.337	1	3320000			861	4360	453	458	1025;1026	1025					0.059703759795411315
ALIDRMVNL	9	Unmodified	_ALIDRMVNL_					0	0	0		ENSG00000175197|ENST00000346473|DDIT3;nc|ENSG00000285133|P35638-2|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	ENSG00000175197|ENST00000346473|DDIT3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	522.797152	1043.57975	2.0981	0.0010969	0.99835	0.00052193	3.0965	0.0016188	522.7971647263826	55.989	0.23331	55.989	55.88	56.113	0	0.11769	-0.00060425	NaN	82.529	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892870			862	4360	453	458							0.059703759795411315
ALIEFIRSEY	10	Unmodified	_ALIEFIRSEY_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1;ENST00000504698.1_1_5:33456142-33459991:+|nuORF	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.8343383669853	2	620.832246	1239.64994	2.206	0.0013695	-0.28577	-0.00017742	1.9202	0.0011921	620.8322827631902	60.017	1.1667	61.437	61.115	62.281	1.4196					121	37	6	0	0	0	0.0487	5	25253	25070;25116;25155;25207;25253		124.95	71.12	1	224950000			863	1822	454	459	1027;1028;1029;1030;1031	1031					0.039699528490018565
ALIEFIRSEY	10	Unmodified	_ALIEFIRSEY_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1;ENST00000504698.1_1_5:33456142-33459991:+|nuORF	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.8339721560478	2	620.832246	1239.64994	2.3848	0.0014805	-0.56585	-0.0003513	1.8189	0.0011293	620.8320312344696	59.512	0.97769	61.481	61.193	62.171	1.969					96	31	5	0	0	0	0.064385	6	24932	24888;24932;24971;25023;25066;25162		114.5	76.321	1	283210000			864	1822	454	459	1032;1033;1034;1035;1036;1037	1033					0.039699528490018565
ALIEKLVEL	9	Unmodified	_ALIEKLVEL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.3243286013603	2	514.323525	1026.6325	2.0983	0.0010792	0.39841	0.00020491	2.4967	0.0012841	514.3235237878524	64.921	0.38263	64.921	64.69	65.072	0					27	11	3	0	0	0	0.023685	2	27054	27008;27054		96.367	20.606	1	1852400			865	592	455	460	1038;1039	1039					0.12024657313986609
ALIEKLVEL	9	Unmodified	_ALIEKLVEL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.3251220583916	2	514.323525	1026.6325	2.0649	0.001062	0.74887	0.00038516	2.8138	0.0014472	514.3238853738167	64.341	0.35681	64.67	64.497	64.854	0.32899					22	10	3	0	0	0	0.037098	2	26973	26925;26973		78.728	20.049	1	2009100			866	592	455	460	1040;1041	1041					0.12024657313986609
ALIEKLVEL	9	Unmodified	_ALIEKLVEL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3258544802666	2	514.323525	1026.6325	3.2143	0.0016532	1.2157	0.00062524	4.43	0.0022784	514.3240432302414	63.048	0.40468	64.462	64.254	64.659	1.4134					29	12	3	0	0	0	0.033102	2	26423	26423;26474		82.529	19.957	1	4792100			867	592	455	460	1042;1043	1042					0.12024657313986609
ALIEKLVEL	9	Unmodified	_ALIEKLVEL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000532469.1_1_11:65029724-65047127:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3254882693291	2	514.323525	1026.6325	3.1895	0.0016404	0.90776	0.00046688	4.0972	0.0021073	514.3239230899014	62.481	0.37335	64.426	64.254	64.628	1.9444					30	11	3	0	0	0	0.0060384	2	26246	26198;26246		118.07	21.957	1	5546100			868	592	455	460	1044;1045	1045					0.12024657313986609
ALIEVPDGFTA	11	Unmodified	_ALIEVPDGFTA_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000478617.5_1_1:201952590-201969135:+|nuORF	ENSG00000176393|ENST00000295640|RNPEP	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.7982055544853	2	566.797872	1131.58119	1.2785	0.00072462	-0.22768	-0.00012905	1.0508	0.00059557	566.7977162797663	70.664	0.28078	70.988	70.862	71.143	0.32359					12	8	2	0	0	0	0.33951	1	29606	29606		29.082	15.176	1	685660			869	4406	456	461	1046	1046					0.02066288549303863
ALIEVPDGFTA	11	Unmodified	_ALIEVPDGFTA_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000478617.5_1_1:201952590-201969135:+|nuORF	ENSG00000176393|ENST00000295640|RNPEP	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7994872927666	2	566.797872	1131.58119	2.4499	0.0013886	0.23703	0.00013435	2.6869	0.0015229	566.7982351480953	69.621	0.34274	70.987	70.817	71.159	1.3657					18	10	3	0	0	0	0.11083	1	29216	29216		53.833	26.204	1	3714300			870	4406	456	461	1047	1047					0.02066288549303863
ALIEVPDGFTA	11	Unmodified	_ALIEVPDGFTA_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000478617.5_1_1:201952590-201969135:+|nuORF	ENSG00000176393|ENST00000295640|RNPEP	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.7994262576103	2	566.797872	1131.58119	1.5604	0.00088444	0.94827	0.00053748	2.5087	0.0014219	566.7986348548939	69.177	0.37476	71.03	70.856	71.23	1.853					21	11	3	0	0	0	0.2718	2	29022	29022;29076		34.402	12.791	1	1836300			871	4406	456	461	1048;1049	1048					0.02066288549303863
ALIGILTGL	9	Unmodified	_ALIGILTGL_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	870.5695678591728	1	870.565881	869.558604	4.5011	0.0039185	-0.88553	-0.00077091	3.6155	0.0031476	870.565455166675	89.346	0.30745	90.75	90.583	90.891	1.4045					16	9	2	0	0	0	0.01705	1	37628	37628		101.72	0	1	1748200			872	1424	457	462	1050	1050					0.11860733942330626
ALIGILTGL	9	Unmodified	_ALIGILTGL_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	870.565881	869.558604	2.1253	0.0018502	0.17865	0.00015553	2.304	0.0020058	870.5669343629038	91.182	0.28187	91.182	90.999	91.281	0	0.26651	0.0004608	NaN	101.72	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441870			873	1424	457	462							0.11860733942330626
ALIKEYHK	8	Unmodified	_ALIKEYHK_					0	0	0			REV__tr|A0A553SJE3|A0A553SJE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16635PE=4SV=1	REV__tr|A0A553SJE3|A0A553SJE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16635PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	501.2599975466728	2	501.292559	1000.57057	1.5342	0.00076907	-1.5151	-0.00075952	0.019047	9.548E-06	501.29162519413114	65.452	0.52739	67.36	66.969	67.496	1.9085					29	16	2	0	0	0	2.3239	1	27503	27503		5.2307	0	1	1299600	+		874	14900	458	463	1051	1051					0.07030350685511166
ALILEPSLYTV	11	Unmodified	_ALILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	610.3544189333916	2	609.852647	1217.69074	2.3591	0.0014387	-2.8619	-0.0017453	-0.50276	-0.00030661	609.8499651710326	81.551	0.29317	81.551	81.44	81.733	0					14	9	2	0	0	0	0.16647	1	33982	33982		43.858	19.838	1	738190			875	1739	459	464	1052	1052					0.09060294168602923
ALILEPSLYTV	11	Unmodified	_ALILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.8540527224541	2	609.852647	1217.69074	2.557	0.0015594	0.55675	0.00033954	3.1137	0.0018989	609.8526252037481	80.151	0.34357	81.402	81.232	81.575	1.2512					25	10	3	0	0	0	0.02806	1	33650	33650		81.89	40.051	1	3051900			876	1739	459	464	1053	1053					0.09060294168602923
ALILEPSLYTV	11	Unmodified	_ALILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.8541137576103	2	609.852647	1217.69074	1.4348	0.00087502	-0.15821	-9.6485E-05	1.2766	0.00077853	609.8526085729629	79.705	0.3391	81.422	81.229	81.568	1.7167					20	10	3	0	0	0	0.03513	1	33406	33406		74.929	43.661	1	1720700			877	1739	459	464	1054	1054					0.09060294168602923
ALILEPSLYTV	11	Unmodified	_ALILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	609.852647	1217.69074	1.9079	0.0011635	-1.4519	-0.00088545	0.45596	0.00027807	609.8515681437705	81.125	0.28034	81.415	81.245	81.525	0.29056	-0.032405	-0.00093664	NaN	81.89	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892910			878	1739	459	464							0.09060294168602923
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1014.584521472454	1	1014.58299	1013.57571	1.7099	0.0017348	-0.32103	-0.00032571	1.3888	0.0014091	1014.5822743265505	66.974	0.34727	66.974	66.798	67.146	0					20	10	3	0	0	0	0.057404	1	27925	27925		75.761	4.6272	1	2057700		+	879	344	460	465	1055	1055					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1014.585620105267	1	1014.58299	1013.57571	2.2095	0.0022417	-0.52687	-0.00053456	1.6826	0.0017072	1014.5824339875832	66.63	0.34634	66.954	66.749	67.096	0.32449					18	10	2	0	0	0	0.076926	2	27914	27859;27914		68.081	3.8444	1	2132100		+	880	344	460	465	1056;1057	1057					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7969238162041	2	507.795132	1013.57571	2.1652	0.0010995	0.77627	0.00039419	2.9414	0.0014936	507.79544499524906	66.684	0.31416	67.009	66.749	67.063	0.32449					24	9	3	0	0	0	0.043055	1	27896	27896		81.89	9.9679	1	3134100		+	881	344	460	465	1058	1058					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7966796755791	2	507.795132	1013.57571	3.1351	0.001592	-0.32489	-0.00016498	2.8102	0.001427	507.79493994738374	65.433	0.46278	66.832	66.601	67.064	1.3989					44	14	4	0	0	0	0.047799	2	27486	27396;27486		85.272	22.699	1	11898000		+	882	344	460	465	1059;1060	1060					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1014.585009753704	1	1014.58299	1013.57571	2.2314	0.0022639	0.36034	0.0003656	2.5917	0.0026295	1014.5834031929616	65.434	0.40222	66.833	66.601	67.004	1.3989					34	12	4	0	0	0	0.064063	2	27402	27402;27445		137.42	41.057	1	7237600		+	883	344	460	465	1061;1062	1061					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7956420779228	2	507.795132	1013.57571	1.9575	0.000994	-0.23398	-0.00011881	1.7235	0.00087519	507.7950202418693	64.983	0.40524	66.891	66.69	67.095	1.9085					40	12	4	0	0	0	0.065879	2	27260	27211;27260		103.75	11.095	1	12095000		+	884	344	460	465	1063;1064	1064					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1014.583544909954	1	1014.58299	1013.57571	1.8233	0.0018498	0.066139	6.7104E-05	1.8894	0.0019169	1014.583021979798	64.983	0.37462	66.891	66.72	67.095	1.9085					28	11	3	0	0	0	0.067431	2	27240	27240;27288		149.91	53.547	1	6402300		+	885	344	460	465	1065;1066	1065					0.06946609757460465
ALISGIEAQL	10	Unmodified	_ALISGIEAQL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	507.795132	1013.57571	1.9298	0.00097995	0.20198	0.00010257	2.1318	0.0010825	507.79504843999194	66.974	0.31779	66.974	66.798	67.116	0	0.047448	0.0002372	NaN	81.89	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2588500		+	886	344	460	465							0.06946609757460465
ALITDSQPVQ	10	Unmodified	_ALITDSQPVQ_					0	0	0			REV__nc|ENSG00000166478|P52747-2|ZNF143	REV__nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2909423708916	2	536.287671	1070.56079	3.0964	0.0016605	0.7129	0.00038232	3.8093	0.0020429	536.2880373330855	74.41	0.31945	76.206	76.051	76.371	1.7962					24	9	3	0	0	0	0.1353	1	31206	31206		57.722	2.9484	1	1940900	+		887	10827	461	466	1067	1067					0.028331178894632103
ALITDSQPVQ	10	Unmodified	_ALITDSQPVQ_					0	0	0			REV__nc|ENSG00000166478|P52747-2|ZNF143	REV__nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	536.287671	1070.56079	3.0964	0.0016605	0.7129	0.00038232	3.8093	0.0020429	536.2880373330855	74.41	0.31945	76.206	76.051	76.371	1.7962	-0.030458	-0.00056458	NaN	57.722	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1940900	+		888	10827	461	466							0.028331178894632103
ALITKLRYRF	10	Unmodified	_ALITKLRYRF_					0	0	0		tr|A0A7D6ZIH9|A0A7D6ZIH9_9CLOTAnti-sigmafactordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04310PE=4SV=1	tr|A0A7D6ZIH9|A0A7D6ZIH9_9CLOTAnti-sigmafactordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04310PE=4SV=1	tr|A0A7D6ZIH9|A0A7D6ZIH9_9CLOTAnti-sigmafactordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04310PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8957397341728	2	640.895515	1279.77648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.906	1	41.216	40.716	41.716	1.3102								0	0	0	0.66185	1	16738	16738		1.3295	0.13619	1				889	17101	462	467	1068	1068					0.14777923864767217
ALITRIFGV	9	Unmodified	_ALITRIFGV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.3118163943291	2	495.310752	988.606951	1.3531	0.00067018	-0.23885	-0.00011831	1.1142	0.00055188	495.31123545706134	66.908	0.31982	66.908	66.703	67.022	0					16	9	2	0	0	0	0.087723	2	27890	27844;27890		53.404	24.322	1	2463300			890	1943	463	468	1069;1070	1070					0.11219227582228086
ALITRIFGV	9	Unmodified	_ALITRIFGV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.3119384646416	2	495.310752	988.606951	2.5806	0.0012782	-0.71231	-0.00035281	1.8683	0.00092538	495.31100658223994	66.313	0.34846	66.637	66.495	66.843	0.32449					18	10	2	0	0	0	0.087723	1	27754	27754		53.404	20.618	1	2480400			891	1943	463	468	1071	1071					0.11219227582228086
ALITRIFGV	9	Unmodified	_ALITRIFGV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.3122131228447	2	495.310752	988.606951	3.0638	0.0015176	-1.4732	-0.00072968	1.5907	0.00078788	495.3107582503241	65.033	0.37741	66.432	66.224	66.601	1.3989					26	11	3	0	0	0	0.039278	2	27275	27231;27275		76.825	36.875	1	5529800			892	1943	463	468	1072;1073	1073					0.11219227582228086
ALITRIFGV	9	Unmodified	_ALITRIFGV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;ENST00000436947.1_1_2:43711555-43732871:-|nuORF	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.3119689822197	2	495.310752	988.606951	2.1734	0.0010765	0.21494	0.00010646	2.3883	0.001183	495.3110421534156	64.51	0.41334	66.438	66.202	66.615	1.928					21	12	2	0	0	0	0.066197	2	27022	27022;27066		61.602	26.583	1	4854500			893	1943	463	468	1074;1075	1074					0.11219227582228086
ALITSVPQLKG	11	Unmodified	_ALITSVPQLKG_					0	0	0			REV__HELZ-SRSF4|1|fusion	REV__HELZ-SRSF4|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2326537966728	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.376	1	97.467	96.967	97.967	0.090881								0	0	0	0.63775	1	40745	40745		2.4348	0.69251	1		+		894	14180	464	469	1076	1076					0.11794847091255178
ALITTILHL	9	Unmodified	_ALITTILHL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant;nc|ENSG00000164327|Q6R327-4|RICTOR;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.8191406130791	2	497.81841	993.622267	1.553	0.00077313	-0.076835	-3.825E-05	1.4762	0.00073488	497.81816706914	78.095	0.31384	78.095	77.937	78.251	0					22	9	3	0	0	0	0.052478	1	32476	32476		67.035	0	1	2183600			895	3772	465	470	1077	1077					0.12520094379431157
ALITTILHL	9	Unmodified	_ALITTILHL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant;nc|ENSG00000164327|Q6R327-4|RICTOR;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.8180114626884	2	497.81841	993.622267	2.5927	0.0012907	-1.8374	-0.00091468	0.75532	0.00037601	497.81731295677736	77.489	0.3127	77.806	77.637	77.95	0.31653					20	9	3	0	0	0	0.052478	2	32438	32388;32438		67.035	0	1	2260600			896	3772	465	470	1078;1079	1079					0.12520094379431157
ALITTILHL	9	Unmodified	_ALITTILHL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant;nc|ENSG00000164327|Q6R327-4|RICTOR;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8198425173759	2	497.81841	993.622267	2.5011	0.0012451	0.71726	0.00035707	3.2184	0.0016022	497.81857102517904	76.362	0.36852	77.656	77.488	77.857	1.2938					35	11	4	0	0	0	0.020661	2	32072	32023;32072		98.807	0	1	10301000			897	3772	465	470	1080;1081	1081					0.12520094379431157
ALITTILHL	9	Unmodified	_ALITTILHL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant;nc|ENSG00000164327|Q6R327-4|RICTOR;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8197509646416	2	497.81841	993.622267	2.6323	0.0013104	-0.226	-0.00011251	2.4063	0.0011979	497.81826244589706	75.815	0.35959	77.582	77.391	77.751	1.7672					34	11	4	0	0	0	0.010702	2	31812	31764;31812		106.85	0	1	8992000			898	3772	465	470	1082;1083	1083					0.12520094379431157
ALIYKSFSL	9	Unmodified	_ALIYKSFSL_					0	0	0			REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3019897341728	2	521.302593	1040.59063	2.25	0.0011729	0.71406	0.00037224	2.964	0.0015452	521.302778793659	65.956	0.3935	67.355	67.124	67.517	1.3989					21	12	3	0	0	0	0.12251	1	27673	27673		41.84	5.7954	1	2741500	+		899	15770	466	471	1084	1084					0.07196101625481788
ALIYKSFSL	9	Unmodified	_ALIYKSFSL_					0	0	0			REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	521.302593	1040.59063	2.25	0.0011729	0.71406	0.00037224	2.964	0.0015452	521.302778793659	65.956	0.3935	67.355	67.124	67.517	1.3989	-0.048595	0.00084529	NaN	41.84	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2741500	+		900	15770	466	471							0.07196101625481788
ALIYKSFSL	9	Unmodified	_ALIYKSFSL_					0	0	0			REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	REV__tr|A0A7D6ZXY2|A0A7D6ZXY2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14285PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	521.302593	1040.59063	1.7495	0.000912	-0.51476	-0.00026835	1.2347	0.00064366	521.3027284300741	65.544	0.43381	67.452	67.095	67.529	1.9085	0.048595	-0.00043589	NaN	41.84	23	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2617400	+		901	15770	466	471							0.07196101625481788
ALKAALISP	9	Unmodified	_ALKAALISP_					0	0	0			REV__nc|ENSG00000144331|Q569K4-3|ZNF385B	REV__nc|ENSG00000144331|Q569K4-3|ZNF385B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	883.5623657107353	1	883.56113	882.553853	2.4248	0.0021425	-0.69441	-0.00061356	1.7304	0.0015289	883.5605536979324	73.742	0.38422	74.067	73.849	74.233	0.32494					30	11	3	0	0	0	0.24063	1	30908	30908		28.487	0	1	3286400	+		902	10243	467	472	1085	1085					0.10787849799555715
ALKADFEL	8	Unmodified	_ALKADFEL_					0	0	0			REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.4991943240166	1	906.49311	905.485833	1.5215	0.0013792	0.37719	0.00034192	1.8987	0.0017211	906.4932310900009	70.88	0.34857	70.88	70.718	71.067	0					17	10	2	0	0	0	0.62161	1	29574	29574		38.151	13.477	1	973170	+		903	11748	468	473	1086	1086					0.029309801489034726
ALKADFEL	8	Unmodified	_ALKADFEL_					0	0	0			REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	906.4962036013603	1	906.49311	905.485833	1.3692	0.0012412	2.9827	0.0027038	4.3519	0.003945	906.4961259022488	70.4	0.33202	70.723	70.56	70.892	0.32224					15	10	2	0	0	0	0.71791	1	29498	29498		28.487	1.6032	1	1557100	+		904	11748	468	473	1087	1087					0.029309801489034726
ALKADFEL	8	Unmodified	_ALKADFEL_					0	0	0			REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	REV__nc|ENSG00000198865|Q4G0S7-2|CCDC152	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	906.4938842654228	1	906.49311	905.485833	1.266	0.0011476	1.3659	0.0012382	2.6319	0.0023858	906.4951132421712	68.75	0.3589	70.602	70.439	70.798	1.853					21	11	2	0	0	0	0.1274	1	28879	28879		88.904	7.0395	1	3788400	+		905	11748	468	473	1088	1088					0.029309801489034726
ALKATSAFL	9	Unmodified	_ALKATSAFL_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-6|MEI1;nc|ENSG00000167077|Q5TIA1-4|MEI1;MEI1|p.D538Efs*33|1|0.08|ENSG00000167077|chr22:41745959-41745960|-/ATACCGTTGCCTTACCATGAACCTGCTTTTGT|frameshift_variant	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.2759887576103	2	461.273835	920.533118	3.5435	0.0016345	0.60177	0.00027758	4.1452	0.0019121	461.2743678195693	86.277	0.41965	87.403	87.249	87.668	1.1265					24	16	2	0	0	0	0.76456	1	36338	36338		4.756	2.1785	1	6044500			906	3945	469	474	1089	1089					0.06967259419900529
ALKDGGAAKN	10	Unmodified	_ALKDGGAAKN_					0	0	0			REV__ENSG00000182631|ENST00000330120|RXFP3	REV__ENSG00000182631|ENST00000330120|RXFP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7639037966728	2	472.761623	943.508694	3.4667	0.0016389	3.0106	0.0014233	6.4773	0.0030622	472.7622683894225	96.544	0.43283	96.649	96.573	97.006	0.105					25	13	4	0	0	0	0.16394	1	40391	40391		53.404	1.7742	1	12034000	+		907	11357	470	475	1090	1090					0.03467999266365496
ALKDGGAAKN	10	Unmodified	_ALKDGGAAKN_					0	0	0			REV__ENSG00000182631|ENST00000330120|RXFP3	REV__ENSG00000182631|ENST00000330120|RXFP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7652465701103	2	472.761623	943.508694	4.0425	0.0019111	3.427	0.0016201	7.4695	0.0035313	472.7631064827318	96.29	0.30789	96.711	96.572	96.88	0.4212					15	9	3	0	0	0	0.16394	1	40484	40484		53.404	1.7742	1	8710600	+		908	11357	470	475	1091	1091					0.03467999266365496
ALKEEGPQPP	10	Unmodified	_ALKEEGPQPP_					0	0	0			REV__nc|ENSG00000205560|Q92523-2|CPT1B	REV__nc|ENSG00000205560|Q92523-2|CPT1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2836181521416	2	533.282389	1064.55022	2.859	0.0015247	-1.6977	-0.00090534	1.1614	0.00061934	533.2811711700925	70.073	0.50006	71.426	71.116	71.616	1.3536					37	15	4	0	0	0	0.72878	2	29397	29350;29397		17.113	1.2657	1	4606300	+		909	11817	471	476	1092;1093	1093					0.020531352350417365
ALKHRTLEAR	10	Unmodified	_ALKHRTLEAR_					0	0	0		ENSG00000159337|ENST00000290472|PLA2G4D	ENSG00000159337|ENST00000290472|PLA2G4D	ENSG00000159337|ENST00000290472|PLA2G4D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8579589724541	2	597.856921	1193.69929	2.2076	0.0013198	-1.2712	-0.00076	0.93636	0.00055981	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.89803	1	31004	31004		1.4819	0.8804	1	2856000			910	3521	472	477	1094	1094					0.11018705648439209
ALKHRTLEAR	10	Unmodified	_ALKHRTLEAR_					0	0	0		ENSG00000159337|ENST00000290472|PLA2G4D	ENSG00000159337|ENST00000290472|PLA2G4D	ENSG00000159337|ENST00000290472|PLA2G4D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8580200076103	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	0.89803	1	30996	30996		1.4819	0.8804	1	3279500			911	3521	472	477	1095	1095					0.11018705648439209
ALKKLNLKGHL	11	Unmodified	_ALKKLNLKGHL_					0	0	0		tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	309.5244323611259	4	309.455308	1233.79213	-0.27689	-8.5685E-05	-1.2295	-0.00038047	-1.5064	-0.00046615	309.4551505060338	21.106	0.65587	22.231	22.072	22.728	1.1254					49	21	3	0	0	0	0.14606	1	8748	8748		1.1098	0.78048	1	5770100			912	16585	473	478	1096	1096					0.18458210381845674
ALKLQVDQWK	10	Unmodified	_ALKLQVDQWK_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2397033572197	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.115	1	79.115	78.615	79.615	0								0	0	0	0.66161	1	32940	32940		1.7423	0.54893	1				913	3192	474	479	1097	1097					0.09281651839842198
ALKLQVDQWK	10	Unmodified	_ALKLQVDQWK_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MSMS	GG20161007_CRH_Patient100_A02_02	2	410.2393371462822	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.831	1	66.155	65.655	66.655	0.32449								0	0	0	0.66141	1	27564	27564		2.086	1.3095	1				914	3192	474	479	1098	1098					0.09281651839842198
ALKLQVDQWK	10	Unmodified	_ALKLQVDQWK_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MSMS	GG20161007_CRH_Patient100_A02_02	2	410.2385742068291	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.226	1	68.548	68.048	69.048	0.32227								0	0	0	0.66161	1	28559	28559		1.7423	1.1154	1				915	3192	474	479	1099	1099					0.09281651839842198
ALKLQVDQWK	10	Unmodified	_ALKLQVDQWK_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2400085330009	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.121	1	93.057	92.557	93.557	0.93623								0	0	0	0.66141	1	38798	38798		2.086	1.4592	1				916	3192	474	479	1100	1100					0.09281651839842198
ALKLQVDQWK	10	Unmodified	_ALKLQVDQWK_					0	0	0		nc|ENSG00000147799|Q9C0H5|ARHGAP39;ENSG00000147799|ENST00000377307|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	nc|ENSG00000147799|Q9C0H5|ARHGAP39	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2406799197197	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.4	1	95.142	94.642	95.642	0.74124								0	0	0	0.66141	1	39721	39721		2.086	1.3883	1				917	3192	474	479	1101	1101					0.09281651839842198
ALKRCQSM	8	Unmodified	_ALKRCQSM_					0	0	0			REV__ENST00000599872.1_1_19:16741696-16741744:-|nuORF	REV__ENST00000599872.1_1_19:16741696-16741744:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.7411987185478	2	468.741322	935.468092	2.2366	0.0010484	-3.3537	-0.001572	-1.1171	-0.00052361	468.74004871640744	74.249	0.35107	74.249	74.079	74.43	0					17	10	2	0	0	0	0.89008	2	30899	30899;30951		2.5775	0	1	807350	+		918	14115	475	480	1102;1103	1102					-0.0022238164924601733
ALKYLNKLV	9	Unmodified	_ALKYLNKLV_					0	0	0			REV__ENSG00000122420|ENST00000370757|PTGFR	REV__ENSG00000122420|ENST00000370757|PTGFR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0699951052666	3	354.562099	1060.66447	0.77701	0.0002755	0.44906	0.00015922	1.2261	0.00043472	354.56210766434725	29.479	0.30528	29.758	29.559	29.865	0.2793					16	9	2	0	0	0	0.11812	1	12335	12335		0.23584	0	1	1095000	+		919	9607	476	481	1104	1104					0.13656069787793967
ALKYLNKLV	9	Unmodified	_ALKYLNKLV_					0	0	0			REV__ENSG00000122420|ENST00000370757|PTGFR	REV__ENSG00000122420|ENST00000370757|PTGFR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0699340701103	3	354.562099	1060.66447	0.29729	0.00010541	-0.15106	-5.3559E-05	0.14624	5.1851E-05	354.56216935810477	27.593	0.30778	29.368	29.202	29.51	1.7754					23	9	3	0	0	0	0.11333	1	11568	11568		5.2969	0.76802	1	2916500	+		920	9607	476	481	1105	1105					0.13656069787793967
ALLAGSEYLKL	11	Unmodified	_ALLAGSEYLKL_					0	0	0		ENST00000462641.1_1_22:36907036-36908721:-|nuORF;nc|ENSG00000100353|O15371-2|EIF3D;nc|ENSG00000100353|O15371-3|EIF3D;ENSG00000100353|ENST00000216190|EIF3D	ENST00000462641.1_1_22:36907036-36908721:-|nuORF	ENST00000462641.1_1_22:36907036-36908721:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3460571169853	2	589.344989	1176.67542	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.802	1	62.802	62.302	63.302	0								0	0	0	0.52077	1	26184	26184		24.991	4.5373	1				921	1267	477	482	1106	1106					0.09415427371413898
ALLAIWHHLL	10	Unmodified	_ALLAIWHHLL_					0	0	0			REV__ENSG00000184014|ENST00000328194|DENND5A	REV__ENSG00000184014|ENST00000328194|DENND5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2400695681572	3	396.241359	1185.70225	0.066608	2.6393E-05	-2.3952	-0.00094907	-2.3286	-0.00092268	396.24061318812386	40.746	0.31028	40.746	40.549	40.859	0					26	9	4	0	0	0	0.70643	2	17084	17046;17084		10.8	0	1	2375100	+		922	11409	478	483	1107;1108	1108					0.1168258077327664
ALLAPLRGA	9	Unmodified	_ALLAPLRGA_					0	0	0		ENSG00000138892|ENST00000433387|TTLL8;nc|ENSG00000138892|A6PVC2-2|TTLL8;nc|ENSG00000138892|A6PVC2|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	ENSG00000138892|ENST00000433387|TTLL8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2828552126884	2	441.281995	880.549437	2.216	0.00097786	-0.6455	-0.00028485	1.5705	0.00069301	441.2816119368647	40.796	0.5062	42.689	42.358	42.864	1.8927					34	15	3	0	0	0	0.13873	2	17066	17019;17066		39.957	3.9131	1	2250400			923	2860	479	484	1109;1110	1110					0.10438385376653514
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.3110839724541	2	510.310418	1018.60628	1.8998	0.00096947	-0.99465	-0.00050758	0.90511	0.00046189	510.3097793159718	67.647	2.0976	67.647	66.545	68.642	0					141	66	5	0	0	0	0.052892	3	28242	28117;28242;28282		88.904	7.9661	1	64475000	+		924	9715	480	485	1111;1112;1113	1112					0.09772388142516775
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.3110839724541	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.04351	3	28184	28145;28184;28227		100.37	27.404	1	98417000	+		925	9715	480	485	1114;1115;1116	1115					0.09772388142516775
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3116332888603	2	510.310418	1018.60628	2.451	0.0012508	-0.68337	-0.00034873	1.7676	0.00090203	510.31046006666696	65.956	1.2502	67.355	66.817	68.068	1.3989					112	40	6	0	0	0	0.058389	3	27601	27601;27677;27729		92.822	10.293	1	361120000	+		926	9715	480	485	1117;1118;1119	1117					0.09772388142516775
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1019.617724597454	1	1019.61356	1018.60628	1.7602	0.0017947	-0.013235	-1.3495E-05	1.7469	0.0017812	1019.6137163426306	65.514	0.21655	67.423	67.312	67.529	1.9085					13	6	3	0	0	0	0.052892	1	27488	27488		88.904	6.3743	1	2285900	+		927	9715	480	485	1120	1120					0.09772388142516775
ALLATLAAYL	10	Unmodified	_ALLATLAAYL_					0	0	0			REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	REV__ENST00000419533.1_1_1:19477984-19504233:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1019.61356	1018.60628	1.7602	0.0017947	-0.013235	-1.3495E-05	1.7469	0.0017812	1019.6137163426306	65.514	0.21655	67.423	67.312	67.529	1.9085	-0.013019	0.0014321	NaN	88.904	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2285900	+		928	9715	480	485							0.09772388142516775
ALLAYTLGV	9	Unmodified	_ALLAYTLGV_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000419025.1_1_3:183745012-183745345:-|nuORF;ENST00000553854.1_1_14:82128143-82128728:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	920.5450927615166	1	920.545145	919.537869	1.6767	0.0015435	-1.6968	-0.001562	-0.020036	-1.8444E-05	920.5433551493007	73.476	0.36244	73.476	73.248	73.611	0					19	11	2	0	0	0	0.15478	1	30562	30562		38.151	2.107	1	2892100			929	1331	481	486	1121	1121					0.07488143562670757
ALLAYTLGV	9	Unmodified	_ALLAYTLGV_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000419025.1_1_3:183745012-183745345:-|nuORF;ENST00000553854.1_1_14:82128143-82128728:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.5451537966728	1	920.545145	919.537869	1.5886	0.0014623	-1.6426	-0.001512	-0.054	-4.971E-05	920.5437162188648	71.755	0.43608	73.097	72.905	73.342	1.3415					34	13	4	0	0	0	0.030843	3	30121	30077;30121;30161		86.121	8.137	1	14631000			930	1331	481	486	1122;1123;1124	1123					0.07488143562670757
ALLAYTLGV	9	Unmodified	_ALLAYTLGV_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000419025.1_1_3:183745012-183745345:-|nuORF;ENST00000553854.1_1_14:82128143-82128728:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.5433227419853	1	920.545145	919.537869	1.5766	0.0014514	-3.248	-0.0029899	-1.6714	-0.0015386	920.5422523053123	71.317	0.43961	73.141	72.91	73.349	1.8239					32	13	3	0	0	0	0.030843	3	29924	29876;29924;29970		86.121	8.137	1	16972000			931	1331	481	486	1125;1126;1127	1126					0.07488143562670757
ALLAYTLGV	9	Unmodified	_ALLAYTLGV_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000419025.1_1_3:183745012-183745345:-|nuORF;ENST00000553854.1_1_14:82128143-82128728:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	920.545145	919.537869	2.1856	0.002012	-1.5427	-0.0014201	0.64294	0.00059185	920.5438561218525	72.97	0.3174	73.295	73.147	73.464	0.32494	0.04264	0.000534	NaN	86.121	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1703200			932	1331	481	486							0.07488143562670757
ALLDGRVQL	9	Unmodified	_ALLDGRVQL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7963744997978	2	492.795466	983.57638	1.7689	0.00087169	0.32348	0.00015941	2.0924	0.0010311	492.79558105723856	49.425	0.3712	49.425	49.222	49.593	0					27	11	3	0	0	0	0.029061	2	20624	20624;20660		88.954	20.873	1	4579000			933	4850	482	487	1128;1129	1128					0.08393449197183145
ALLDGRVQL	9	Unmodified	_ALLDGRVQL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7965576052666	2	492.795466	983.57638	2.4081	0.0011867	-0.20323	-0.00010015	2.2048	0.0010865	492.7954818132128	48.939	0.37547	49.269	49.039	49.414	0.3302					29	11	3	0	0	0	0.0060384	2	20506	20506;20545		118.07	36.178	1	5152000			934	4850	482	487	1130;1131	1130					0.08393449197183145
ALLDGRVQL	9	Unmodified	_ALLDGRVQL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7963439822197	2	492.795466	983.57638	2.435	0.0011999	-0.13898	-6.8491E-05	2.296	0.0011314	492.79544371829866	47.523	0.41676	48.905	48.663	49.079	1.3825					22	12	2	0	0	0	0.0049178	2	19899	19852;19899		122.18	33.225	1	8039100			935	4850	482	487	1132;1133	1133					0.08393449197183145
ALLDGRVQL	9	Unmodified	_ALLDGRVQL_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7966186404228	2	492.795466	983.57638	2.44	0.0012024	0.098132	4.8359E-05	2.5381	0.0012508	492.79558393653775	47.071	0.34884	49.047	48.838	49.187	1.976					19	10	2	0	0	0	0.026734	2	19680	19680;19731		92.653	14.504	1	8789200			936	4850	482	487	1134;1135	1134					0.08393449197183145
ALLDHIWVT	9	Unmodified	_ALLDHIWVT_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	534.7336913943291	2	534.297842	1066.58113	2.5879	0.0013827	1.4693	0.00078504	4.0572	0.0021677	534.2988489467671	64.018	0.32037	65.425	65.24	65.56	1.4071					16	9	2	0	0	0	0.071872	1	26895	26895		30.637	16.055	1	1856400			937	3898	483	488	1136	1136					0.050503333399547046
ALLDHIWVT	9	Unmodified	_ALLDHIWVT_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.297842	1066.58113	2.0079	0.0010728	-1.1907	-0.00063616	0.81725	0.00043665	534.2971269279008	65.149	0.18967	65.476	65.388	65.578	0.32689	0.033574	-0.0020285	NaN	30.637	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449760			938	3898	483	488							0.050503333399547046
ALLDHIWVT	9	Unmodified	_ALLDHIWVT_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	534.297842	1066.58113	2.8353	0.0015149	0.63027	0.00033675	3.4655	0.0018516	534.29827775351	63.482	0.31972	65.426	65.248	65.567	1.9444	-0.016322	-8.2678E-05	NaN	30.637	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1828600			939	3898	483	488							0.050503333399547046
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.3112060427666	2	510.310418	1018.60628	1.8998	0.00096947	-0.99465	-0.00050758	0.90511	0.00046189	510.3097793159718	67.647	2.0976	67.647	66.545	68.642	0					141	66	5	0	0	0	0.026734	2	28203	28164;28203		92.653	11.04	1	64475000			940	4467	484	489	1137;1138	1138					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.3099548220634	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.026734	2	28094	28053;28094		92.653	3.7497	1	98417000			941	4467	484	489	1139;1140	1140					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3117553591728	2	510.310418	1018.60628	2.451	0.0012508	-0.68337	-0.00034873	1.7676	0.00090203	510.31046006666696	65.956	1.2502	67.355	66.817	68.068	1.3989					112	40	6	0	0	0	0.026734	1	27638	27638		92.653	11.04	1	361120000			942	4467	484	489	1141	1141					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1019.616748034954	1	1019.61356	1018.60628	1.4912	0.0015204	1.5136	0.0015433	3.0048	0.0030638	1019.6154553064556	65.956	0.27215	67.355	67.216	67.488	1.3989					14	8	2	0	0	0	0.043696	1	27670	27670		72.968	1.8344	1	3758600			943	4467	484	489	1142	1142					0.09772388142516775
ALLDKLYAL	9	Unmodified	_ALLDKLYAL_					0	0	0		ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	ENSG00000177971|ENST00000403490|IMP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.3127929568291	2	510.310418	1018.60628	2.0734	0.0010581	-0.16339	-8.3378E-05	1.91	0.00097471	510.31087600374997	65.54	1.5756	67.448	67.001	68.576	1.9085					113	50	6	0	0	0	0.0069529	4	27493	27417;27454;27493;27532		114.65	18.037	1	286530000			944	4467	484	489	1143;1144;1145;1146	1145					0.09772388142516775
ALLDLINFFI	10	Unmodified	_ALLDLINFFI_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;ENST00000462818.1_1_3:136219063-136323180:-|nuORF;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8448974490166	2	589.844625	1177.6747	2.337	0.0013784	-1.6426	-0.00096886	0.69438	0.00040958	589.8449362087508	64.378	0.31685	66.306	66.17	66.487	1.928					22	9	3	0	0	0	0.65574	1	27019	27019		20.454	2.3073	1	1786900			945	1372;2027	485	490	1147	1147					0.09296632722384857
ALLDRIVSV	9	Unmodified	_ALLDRIVSV_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.3047668337822	2	493.305667	984.596781	1.59	0.00078436	-1.9073	-0.00094087	-0.31727	-0.00015651	493.304535002902	57.291	0.43835	57.291	57.041	57.479	0					52	17	4	0	0	0	0.028318	3	23888	23888;23927;23977		90.135	19.803	1	25993000			946	3423	486	491	1148;1149;1150	1148					0.10386619857001733
ALLDRIVSV	9	Unmodified	_ALLDRIVSV_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.3071472048759	2	493.305667	984.596781	2.9212	0.0014411	0.012389	6.1114E-06	2.9336	0.0014472	493.3054099873645	56.832	0.50901	57.153	56.816	57.325	0.32103					43	17	4	0	0	0	0.019071	3	23833	23787;23833;23872		100.09	29.759	1	29680000			947	3423	486	491	1151;1152;1153	1152					0.10386619857001733
ALLDRIVSV	9	Unmodified	_ALLDRIVSV_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3054382205009	2	493.305667	984.596781	0.841	0.00041487	-1.2551	-0.00061916	-0.41412	-0.00020429	493.30508481398186	55.687	0.38997	57.097	56.88	57.27	1.4099					56	19	4	0	0	0	0.028318	3	23327	23285;23327;23368		90.135	23.678	1	75772000			948	3423	486	491	1154;1155;1156	1155					0.10386619857001733
ALLDRIVSV	9	Unmodified	_ALLDRIVSV_					0	0	0		ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3060790896416	2	493.305667	984.596781	0.19036	9.3907E-05	-0.58494	-0.00028855	-0.39457	-0.00019465	493.30527863568426	55.219	0.38301	57.187	56.93	57.313	1.9684					51	17	4	0	0	0	0.028318	2	23125	23125;23165		90.135	19.803	1	58579000			949	3423	486	491	1157;1158	1157					0.10386619857001733
ALLDSAHLL	9	Unmodified	_ALLDSAHLL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.2295410037041	2	476.776742	951.538931	2.9795	0.0014206	-1.7105	-0.00081554	1.269	0.00060502	476.7761117235298	56.396	0.22639	56.717	56.56	56.786	0.32103					13	7	2	0	0	0	0.097511	1	23609	23609		23.148	10.617	1	1966500			950	779	487	492	1159	1159					0.06122357931565148
ALLDSAHLL	9	Unmodified	_ALLDSAHLL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2231017947197	2	476.776742	951.538931	1.4143	0.00067431	-1.2807	-0.0006106	0.13362	6.3708E-05	476.7763303921038	54.714	0.28353	56.682	56.525	56.809	1.9684					21	9	3	0	0	0	0.097511	1	22920	22920		23.148	6.2061	1	4347300			951	779	487	492	1160	1160					0.06122357931565148
ALLDWVTSV	9	Unmodified	_ALLDWVTSV_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;nc|ENSG00000127603|Q9UPN3-5|MACF1;ENST00000476350.1_1_1:39768622-39838291:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2771484255791	2	502.276575	1002.5386	2.8328	0.0014228	-4.3301	-0.0021749	-1.4973	-0.00075208	502.2740387873148	85.228	0.26196	86.824	86.657	86.919	1.5962					15	10	2	0	0	0	0.12174	1	35792	35792		42.095	23.96	1	3804900			952	2341	488	493	1161	1161					0.037429382117238674
ALLEDSVIR	9	Unmodified	_ALLEDSVIR_					0	0	0		nc|ENSG00000174227|Q5H8A4-5|PIGG;nc|ENSG00000174227|Q5H8A4-6|PIGG;nc|ENSG00000174227|Q5H8A4-4|PIGG;PIGG|p.V490Gfs*22|1|0.05|ENSG00000174227|chr4:521796-521796|T/-|frameshift_variant;nc|ENSG00000174227|Q5H8A4-2|PIGG;ENSG00000174227|ENST00000453061|PIGG	nc|ENSG00000174227|Q5H8A4-5|PIGG	nc|ENSG00000174227|Q5H8A4-5|PIGG	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2907592654228	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.862	1	44.186	43.686	44.686	0.32389								0	0	0	0.41514	1	18412	18412		7.2892	0.93513	1				953	4322	489	494	1162	1162					0.06425725614724342
ALLEFEERER	10	Unmodified	_ALLEFEERER_					0	0	0		RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENSG00000184863|ENST00000401878|RBM33	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	646.8387328982353	2	646.335684	1290.65681	2.5053	0.0016193	0.91933	0.00059419	3.4246	0.0022135	646.3367465115139	87.308	0.33143	87.552	87.441	87.772	0.24387					18	10	3	0	0	0	0.12539	1	36652	36652		4.3292	0	1	652480			954	4713	490	495	1163	1163					0.023112657295769168
ALLEFEERER	10	Unmodified	_ALLEFEERER_					0	0	0		RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENSG00000184863|ENST00000401878|RBM33	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	646.335684	1290.65681	2.8479	0.0018407	0.76918	0.00049715	3.617	0.0023378	646.3364433210601	87.685	0.32652	87.685	87.551	87.878	0	0.06638	-7.6461E-05	NaN	4.3292	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	383260			955	4713	490	495							0.023112657295769168
ALLEGLTVV	9	Unmodified	_ALLEGLTVV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	914.5569946169853	1	914.55571	913.548434	2.5631	0.0023441	-0.84784	-0.0007754	1.7152	0.0015687	914.5545140622683	74.168	0.34914	74.493	74.265	74.614	0.32494					23	10	3	0	0	0	0.069258	1	31036	31036		60.39	2.9182	1	1836400			956	1739	491	496	1164	1164					0.08820126217085544
ALLEGLTVV	9	Unmodified	_ALLEGLTVV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	914.5583984255791	1	914.55571	913.548434	3.2641	0.0029852	-0.12025	-0.00010998	3.1438	0.0028752	914.5558626580009	73.038	0.37383	74.368	74.195	74.569	1.3298					29	11	3	0	0	0	0.046276	2	30668	30668;30714		70.716	3.3717	1	5873100			957	1739	491	496	1165;1166	1165					0.08820126217085544
ALLEGLTVV	9	Unmodified	_ALLEGLTVV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.5557739138603	1	914.55571	913.548434	2.6034	0.0023809	-0.84098	-0.00076912	1.7624	0.0016118	914.5551754244383	72.527	0.37536	74.337	74.137	74.512	1.8101					27	11	3	0	0	0	0.046276	2	30397	30397;30489		70.716	3.3717	1	5539500			958	1739	491	496	1167;1168	1167					0.08820126217085544
ALLELLHEL	9	Unmodified	_ALLELLHEL_					0	0	0		ENST00000514636.1_1_6:33747875-33752267:-|nuORF;ENSG00000161904|ENST00000293760|LEMD2	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.8146240115166	2	525.813325	1049.6121	2.1541	0.0011327	-0.48558	-0.00025532	1.6685	0.00087734	525.8129236578538	81.345	0.35896	81.345	81.195	81.554	0					32	11	4	0	0	0	0.03795	2	33848	33848;33899		77.984	31.963	1	5097500			959	3600	492	497	1169;1170	1169					0.08927486654192762
ALLELLHEL	9	Unmodified	_ALLELLHEL_					0	0	0		ENST00000514636.1_1_6:33747875-33752267:-|nuORF;ENSG00000161904|ENST00000293760|LEMD2	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.8145629763603	2	525.813325	1049.6121	2.1427	0.0011267	0.54502	0.00028658	2.6877	0.0014132	525.813396909346	80.814	0.46698	81.105	80.902	81.369	0.29056					34	14	3	0	0	0	0.022807	3	33787	33740;33787;33828		97.075	43.499	1	5937500			960	3600	492	497	1171;1172;1173	1172					0.08927486654192762
ALLELLHEL	9	Unmodified	_ALLELLHEL_					0	0	0		ENST00000514636.1_1_6:33747875-33752267:-|nuORF;ENSG00000161904|ENST00000293760|LEMD2	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8151122927666	2	525.813325	1049.6121	2.7296	0.0014353	0.39786	0.0002092	3.1275	0.0016445	525.8134592904061	79.856	0.49421	81.107	80.863	81.357	1.2512					45	15	4	0	0	0	0.00090036	3	33542	33459;33502;33542		133.7	66.358	1	9763500			961	3600	492	497	1174;1175;1176	1176					0.08927486654192762
ALLELLHEL	9	Unmodified	_ALLELLHEL_					0	0	0		ENST00000514636.1_1_6:33747875-33752267:-|nuORF;ENSG00000161904|ENST00000293760|LEMD2	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	ENST00000514636.1_1_6:33747875-33752267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8142578005791	2	525.813325	1049.6121	1.8333	0.00096398	0.37319	0.00019623	2.2065	0.0011602	525.8133813565686	79.34	0.49522	81.075	80.814	81.309	1.735					47	15	4	0	0	0	0.0037165	3	33268	33219;33268;33324		125.62	65.235	1	9728700			962	3600	492	497	1177;1178;1179	1178					0.08927486654192762
ALLEMFPEI	9	Unmodified	_ALLEMFPEI_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7826415896416	2	531.780636	1061.54672	5.2817	0.0028087	-2.7368	-0.0014554	2.5449	0.0013534	531.7791821865621	89.498	0.346	90.518	90.3	90.646	1.0199					18	10	2	0	0	0	0.24063	1	37722	37722		28.487	6.7402	1	1710400			963	1088	493	498	1180	1180					0.018407491368179763
ALLEMFPEI	9	Unmodified	_ALLEMFPEI_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	531.780636	1061.54672	4.9305	0.0026219	-4.3575	-0.0023172	0.57295	0.00030469	531.7787986377194	89.115	0.34975	90.519	90.264	90.614	1.4044	0.00069473	-0.0010149	NaN	28.487	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1072800			964	1088	493	498							0.018407491368179763
ALLENMEGLFL	11	Unmodified	_ALLENMEGLFL_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-2|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	625.3279907107353	2	625.328482	1248.64241	1.8576	0.0011616	-1.6115	-0.0010077	0.24605	0.00015386	625.3268832307153	96.576	0.127	96.576	96.507	96.634	0					6	3	2	0	0	0	0.22376	1	40381	40381		38.176	16.639	1	2174500			965	1739	494	499	1181	1181					0.028034772570663336
ALLENMEGLFL	11	Unmodified	_ALLENMEGLFL_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-2|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	625.3297607302666	2	625.328482	1248.64241	2.6171	0.0016365	-0.068187	-4.264E-05	2.5489	0.0015939	625.3287351261489	96.453	0.12592	96.558	96.479	96.604	0.105					6	3	2	0	0	0	0.069099	1	40366	40366		62.573	18.8	1	2875700			966	1739	494	499	1182	1182					0.028034772570663336
ALLENMEGLFL	11	Unmodified	_ALLENMEGLFL_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-2|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.3363525271416	2	625.328482	1248.64241	3.6186	0.0022628	1.0245	0.00064062	4.643	0.0029034	625.3289009873129	96.217	0.1863	96.638	96.509	96.695	0.4212					8	5	2	0	0	0	0.027444	1	40474	40474		85.642	37.893	1	4966500			967	1739	494	499	1183	1183					0.028034772570663336
ALLENMEGLFL	11	Unmodified	_ALLENMEGLFL_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;nc|ENSG00000111481|P61923-3|COPZ1;nc|ENSG00000111481|P61923-4|COPZ1;nc|ENSG00000111481|P61923-2|COPZ1	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.3299438357353	2	625.328482	1248.64241	2.7108	0.0016952	-0.34716	-0.00021709	2.3637	0.0014781	625.3291885827049	96.026	0.15546	96.428	96.336	96.491	0.40208					7	4	2	0	0	0	0.026828	1	40412	40412		89.401	52.895	1	2891500			968	1739	494	499	1184	1184					0.028034772570663336
ALLETWMP	8	Unmodified	_ALLETWMP_					0	0	0		ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	ENSG00000166823|ENST00000300057|MESP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.8347961306572	3	320.83349	959.478639	2.6144	0.00083878	-0.82007	-0.00026311	1.7943	0.00057567	320.8332334456599	96.044	0.27219	96.446	96.366	96.638	0.40208					20	8	3	0	0	0	0.88055	1	40461	40461		6.2058	1.6769	1	7686400			969	3922	495	500	1185	1185					-0.002720757231713833
ALLFMIGAL	9	Unmodified	_ALLFMIGAL_					0	0	0		nc|ENSG00000143921|Q9H221-2|ABCG8;ENSG00000143921|ENST00000272286|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5607177615166	1	948.558687	947.55141	3.4759	0.0032971	1.7131	0.001625	5.189	0.0049221	948.5595511791555	96.874	0.126	97.18	97.101	97.227	0.3062					6	3	2	0	0	0	0.11074	1	40742	40742		45.75	5.3014	1	7744900			970	3057	496	501	1186	1186					0.07553678070246406
ALLGFVKKK	9	Unmodified	_ALLGFVKKK_					0	0	0			REV__tr|A0A553STZ1|A0A553STZ1_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_05900PE=4SV=1	REV__tr|A0A553STZ1|A0A553STZ1_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_05900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.3380920290947	2	502.33677	1002.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.65	1	104.83	104.33	105.33	0.1731								0	0	0	0.42693	1	44333	44333		0.6015	0.076735	1		+		971	15272	497	502	1187	1187					0.1577639099599537
ALLGGHPCFL	10	Unmodified	_ALLGGHPCFL_					0	0	0		ENSG00000036473|ENST00000039007|OTC	ENSG00000036473|ENST00000039007|OTC	ENSG00000036473|ENST00000039007|OTC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.2307617068291	2	514.273312	1026.53207	2.573	0.0013232	4.1447	0.0021315	6.7177	0.0034547	514.2754852246802	73.86	0.25455	74.185	74.073	74.328	0.32494					9	7	2	0	0	0	0.12513	1	30883	30883		7.9102	0.62092	1	491600			972	648	498	503	1188	1188					0.019867217793489544
ALLGGLVNV	9	Unmodified	_ALLGGLVNV_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	855.5312988162041	1	855.52983	854.522553	1.8257	0.0015619	0.0026058	2.2293E-06	1.8283	0.0015642	855.5300909106783	74.825	0.34258	74.825	74.653	74.995	0					18	10	2	0	0	0	0.078975	1	31187	31187		56.541	9.6204	1	1396400			973	3605	499	504	1189	1189					0.0894727676546836
ALLGGLVNV	9	Unmodified	_ALLGGLVNV_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	855.5323974490166	1	855.52983	854.522553	2.5018	0.0021404	-0.07667	-6.5594E-05	2.4251	0.0020748	855.5294831118271	72.746	0.35008	74.556	74.353	74.703	1.8101					25	10	3	0	0	0	0.087207	1	30491	30491		53.576	3.9067	1	1987100			974	3605	499	504	1190	1190					0.0894727676546836
ALLGILQHV	9	Unmodified	_ALLGILQHV_					0	0	0		ENST00000464812.1_1_7:44525191-44530199:-|nuORF;ENSG00000015676|ENST00000355451|NUDCD3	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.3040344119072	2	482.302927	962.591301	1.9105	0.00092143	-0.20284	-9.7832E-05	1.7076	0.0008236	482.3026441748049	66.074	0.28657	66.074	65.87	66.156	0					15	8	2	0	0	0	0.09539	2	27534	27487;27534		50.855	18.738	1	977190			975	602	500	505	1191;1192	1192					0.10850941065177722
ALLGILQHV	9	Unmodified	_ALLGILQHV_					0	0	0		ENST00000464812.1_1_7:44525191-44530199:-|nuORF;ENSG00000015676|ENST00000355451|NUDCD3	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3048583865166	2	482.302927	962.591301	2.7132	0.0013086	-0.85196	-0.0004109	1.8613	0.00089769	482.30237169245896	65.428	0.35101	65.755	65.578	65.929	0.32689					17	10	2	0	0	0	0.069258	1	27395	27395		60.39	10.721	1	1113600			976	602	500	505	1193	1193					0.10850941065177722
ALLGILQHV	9	Unmodified	_ALLGILQHV_					0	0	0		ENST00000464812.1_1_7:44525191-44530199:-|nuORF;ENSG00000015676|ENST00000355451|NUDCD3	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.3047363162041	2	482.302927	962.591301	2.8719	0.0013851	-0.10131	-4.8862E-05	2.7706	0.0013363	482.3029975467274	64.2	0.40168	65.607	65.368	65.77	1.4071					27	12	3	0	0	0	0.046276	2	26946	26881;26946		70.716	10.92	1	3764200			977	602	500	505	1194;1195	1195					0.10850941065177722
ALLGILQHV	9	Unmodified	_ALLGILQHV_					0	0	0		ENST00000464812.1_1_7:44525191-44530199:-|nuORF;ENSG00000015676|ENST00000355451|NUDCD3	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	ENST00000464812.1_1_7:44525191-44530199:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.3042480349541	2	482.302927	962.591301	2.5821	0.0012454	0.098156	4.7341E-05	2.6803	0.0012927	482.30288428477235	63.608	0.37567	65.552	65.345	65.721	1.9444					25	11	3	0	0	0	0.033521	2	26706	26657;26706		81.864	32.195	1	3876900			978	602	500	505	1196;1197	1197					0.10850941065177722
ALLHIRLKTRV	11	Unmodified	_ALLHIRLKTRV_					0	0	0			REV__ENST00000528638.1_1_11:77300495-77320419:+|nuORF	REV__ENST00000528638.1_1_11:77300495-77320419:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	331.1999694705009	4	330.721307	1318.85612	-0.1168	-3.8628E-05	1.1662	0.00038568	1.0494	0.00034705	330.7215569741677	20.81	0.40966	22.384	22.149	22.559	1.5748					16	13	2	0	0	0	0.14606	1	8610	8610		0.50596	0.051438	1	871520	+		979	11245	501	506	1198	1198					0.20944990538782804
ALLHIRLKTRV	11	Unmodified	_ALLHIRLKTRV_					0	0	0			REV__ENST00000528638.1_1_11:77300495-77320419:+|nuORF	REV__ENST00000528638.1_1_11:77300495-77320419:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	330.721307	1318.85612	-0.29207	-9.6595E-05	3.8387	0.0012695	3.5466	0.0011729	330.9746052249079	21.095	0.14475	22.221	22.102	22.247	1.1254	-0.081859	0.003065	NaN	0.50596	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	493410	+		980	11245	501	506							0.20944990538782804
ALLILARRNGL	11	Unmodified	_ALLILARRNGL_					0	0	0			REV__ENSG00000120242|ENST00000380205|IFNA8	REV__ENSG00000120242|ENST00000380205|IFNA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1991760134697	4	303.200208	1208.77173	-2.6672	-0.00080869	-0.37655	-0.00011417	-3.0437	-0.00092286	303.20008450280005	31.651	1.3899	31.651	30.928	32.318	0					148	44	4	0	0	0	1.0362	1	13212	13212		1.3296	0.63198	1	5737000	+		981	9566	502	507	1199	1199					0.17569039722025082
ALLILARRNGL	11	Unmodified	_ALLILARRNGL_					0	0	0			REV__ENSG00000120242|ENST00000380205|IFNA8	REV__ENSG00000120242|ENST00000380205|IFNA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1988708376884	4	303.200208	1208.77173	-2.5807	-0.00078246	-1.4565	-0.0004416	-4.0371	-0.0012241	303.1997851907609	33.758	1.2591	33.758	33.233	34.492	0					121	40	4	0	0	0	1.0362	1	14159	14159		1.3296	0.63198	1	7420400	+		982	9566	502	507	1200	1200					0.17569039722025082
ALLKELVQRWW	11	Unmodified	_ALLKELVQRWW_					0	0	0			REV__ENSG00000214681|ENST00000446461|IQCF5	REV__ENSG00000214681|ENST00000446461|IQCF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2834350466728	3	481.281995	1440.82415	2.633	0.0012672	2.6982	0.0012986	5.3312	0.0025658	481.2828511221248	89.071	1.161	89.071	88.334	89.495	0					95	36	3	0	0	0	1.0388	1	37050	37050		0.50596	0.051438	1	4938900	+		983	11855	503	508	1201	1201					0.12137578064971422
ALLKIEGVYA	10	Unmodified	_ALLKIEGVYA_					0	0	0		ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF	ENST00000329092.12_1_3:197677808-197679492:+|nuORF	ENST00000329092.12_1_3:197677808-197679492:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8226196169853	2	538.82115	1075.62775	1.8525	0.00099817	0.75061	0.00040444	2.6031	0.0014026	538.8214921447441	51.706	0.46898	51.706	51.508	51.977	0					35	14	3	0	0	0	0.21129	2	21573	21523;21573		47.594	5.7548	1	4840100			984	4632	504	509	1202;1203	1203					0.09295773171243127
ALLKIEGVYA	10	Unmodified	_ALLKIEGVYA_					0	0	0		ENST00000329092.12_1_3:197677808-197679492:+|nuORF;ENSG00000182899|ENST00000647248|RPL35A;ENST00000485439.5_1_3:197677808-197681048:+|nuORF	ENST00000329092.12_1_3:197677808-197679492:+|nuORF	ENST00000329092.12_1_3:197677808-197679492:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8223754763603	2	538.82115	1075.62775	1.7568	0.00094658	1.2831	0.00069137	3.0399	0.0016379	538.8217865902091	51.228	0.40492	51.556	51.354	51.759	0.32824					31	12	3	0	0	0	0.28421	3	21463	21415;21463;21505		40.239	8.3036	1	6271900			985	4632	504	509	1204;1205;1206	1205					0.09295773171243127
ALLKRARKLHL	11	Unmodified	_ALLKRARKLHL_					0	0	0		UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant;nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant	UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	440.2991821169853	3	440.297979	1317.87211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.67	1	103.67	103.17	104.17	0								0	0	0	0.63775	1	43579	43579		0.094841	0	1				986	2050	505	510	1207	1207					0.22588696775687822
ALLKRARKLHL	11	Unmodified	_ALLKRARKLHL_					0	0	0		UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant;nc|ENSG00000118900|Q9NPG3-2|UBN1;ENSG00000118900|ENST00000262376|UBN1	UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant	UBN1|p.T1047Rfs*17|1|0.21|ENSG00000118900|chr16:4876985-4876986|-/GGAGGAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	440.3022338747978	3	440.297979	1317.87211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.86	1	103.92	103.42	104.42	0.059502								0	0	0	0.63775	1	43673	43673		0.094841	0.011491	1				987	2050	505	510	1208	1208					0.22588696775687822
ALLKYIETL	9	Unmodified	_ALLKYIETL_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3146240115166	2	532.323525	1062.6325	2.4188	0.0012876	0.51509	0.00027419	2.9339	0.0015618	532.3232827468687	61.267	0.25195	63.225	63.148	63.4	1.9571					16	7	3	0	0	0	0.079895	1	25693	25693		56.177	0	1	3538000			988	2688	506	511	1209	1209					0.10368657313983931
ALLKYTGEV	9	Unmodified	_ALLKYTGEV_					0	0	0		nc|ENSG00000080644|P32297-3|CHRNA3;nc|ENSG00000080644|P32297-1|CHRNA3;ENSG00000080644|ENST00000326828|CHRNA3	nc|ENSG00000080644|P32297-3|CHRNA3	nc|ENSG00000080644|P32297-3|CHRNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2841369509697	2	497.2844	992.554247	4.4663	0.002221	-2.0878	-0.0010382	2.3785	0.0011828	497.28304049773993	87.423	0.24545	88.515	88.366	88.612	1.0918					14	7	2	0	0	0	0.23535	1	36890	36890		29.082	3.6823	1	1136200			989	1006	507	512	1210	1210					0.05767224728765541
ALLKYTGEV	9	Unmodified	_ALLKYTGEV_					0	0	0		nc|ENSG00000080644|P32297-3|CHRNA3;nc|ENSG00000080644|P32297-1|CHRNA3;ENSG00000080644|ENST00000326828|CHRNA3	nc|ENSG00000080644|P32297-3|CHRNA3	nc|ENSG00000080644|P32297-3|CHRNA3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	497.2844	992.554247	4.5741	0.0022746	-4.2985	-0.0021376	0.27566	0.00013708	497.28097313761003	86.945	0.34028	88.44	88.271	88.611	1.4953	-0.037197	-0.0018579	NaN	29.082	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836740			990	1006	507	512							0.05767224728765541
ALLLKGNTQI	10	Unmodified	_ALLLKGNTQI_					0	0	0			REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.8339111208916	2	535.832049	1069.64954	2.1051	0.001128	-0.029685	-1.5906E-05	2.0754	0.0011121	535.8319195190362	61.22	0.34603	61.22	61.047	61.393	0					16	10	2	0	0	0	0.49886	1	25526	25526		27.629	2.2295	1	1470100	+		991	8186	508	513	1211	1211					0.11750577919792704
ALLLKGNTQI	10	Unmodified	_ALLLKGNTQI_					0	0	0			REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	535.832049	1069.64954	2.2499	0.0012055	1.2533	0.00067154	3.5031	0.0018771	535.8327115037213	60.605	0.28402	60.933	60.792	61.076	0.32809	-0.045137	0.00061226	NaN	27.629	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308900	+		992	8186	508	513							0.11750577919792704
ALLLKGNTQI	10	Unmodified	_ALLLKGNTQI_					0	0	0			REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	535.832049	1069.64954	2.6069	0.0013969	0.66647	0.00035712	3.2734	0.001754	535.832636279444	59.416	0.3115	60.836	60.678	60.99	1.4196	-0.14283	-1.6592E-05	NaN	27.629	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2133700	+		993	8186	508	513							0.11750577919792704
ALLLKGNTQI	10	Unmodified	_ALLLKGNTQI_					0	0	0			REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	REV__CCR8|p.Y113Ffs*19|1|0.04|ENSG00000179934|chr3:39332668-39332669|-/TTAGGAAAGCA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	535.832049	1069.64954	2.6135	0.0014004	0.5939	0.00031823	3.2074	0.0017186	535.8325561056472	58.956	0.34431	60.925	60.723	61.067	1.969	-0.053457	-9.4364E-05	NaN	27.629	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1526400	+		994	8186	508	513							0.11750577919792704
ALLLLVPLVP	10	Unmodified	_ALLLLVPLVP_					0	0	0			REV__CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant	REV__CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3629638552666	2	524.362453	1046.71035	3.2266	0.0016919	-0.95742	-0.00050203	2.2692	0.0011899	524.3615276170573	109.4	0.52673	109.55	109.31	109.84	0.15898					46	22	3	0	0	0	0.89803	1	47535	47535		0.45834	0.45834	1	10479000	+		995	8199	509	514	1212	1212					0.18886714970039975
ALLLLWRWPR	10	Unmodified	_ALLLLWRWPR_					0	0	0			REV__nc|ENSG00000140479|P29122-3|PCSK6	REV__nc|ENSG00000140479|P29122-3|PCSK6	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.9407836794853	3	441.939792	1322.79755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.726	1	45.726	45.226	46.226	0								0	0	0	0.66151	1	19130	19130		1.9064	1.1298	1		+		996	10127	510	515	1213	1213					0.14905933964269025
ALLLPSEWI	9	Unmodified	_ALLLPSEWI_					0	0	0			REV__ENSG00000165125|ENST00000359396|TRPV6	REV__ENSG00000165125|ENST00000359396|TRPV6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3026000857353	2	521.302593	1040.59063	1.7495	0.000912	-0.51476	-0.00026835	1.2347	0.00064366	521.3027284300741	65.544	0.43381	67.452	67.095	67.529	1.9085					23	13	3	0	0	0	0.1735	1	27489	27489		36.044	1.6425	1	2617400	+		997	10766	511	516	1214	1214					0.07196101625481788
ALLLRTPVVRP	11	Unmodified	_ALLLRTPVVRP_					0	0	0		nc|ENSG00000204370|O14521-3|SDHD;nc|ENSG00000204370|O14521-4|SDHD;ENSG00000204370|ENST00000375549|SDHD	nc|ENSG00000204370|O14521-3|SDHD	nc|ENSG00000204370|O14521-3|SDHD	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2704955935478	3	412.271319	1233.79213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.018	1	32.84	32.34	33.34	1.8224								0	0	0	0.63775	1	13002	13002		0.50596	0.27011	1				998	5136	512	517	1215	1215					0.18458210381822937
ALLLTTAGNI	10	Unmodified	_ALLLTTAGNI_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5849487185478	1	986.588073	985.580796	5.8999	0.0058208	-0.52813	-0.00052105	5.3718	0.0052997	986.5872730995478	87.69	0.4364	88.782	88.553	88.99	1.0918					27	13	3	0	0	0	0.47063	1	36922	36922		29.082	1.4528	1	9405200	+		999	15693	513	518	1216	1216					0.08742913620085346
ALLLWLALP	9	Unmodified	_ALLLWLALP_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|191|3|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|191|3|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|191|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3268310427666	2	505.325871	1008.63719	1.3884	0.0007016	-4.1901	-0.0021174	-2.8017	-0.0014158	505.3246927802658	68.807	2.3248	70.66	70.281	72.606	1.853					225	74	6	0	0	0	0.24585	2	29308	29308;29363		28.173	7.302	1	643420000			1000	7740	514	519	1217;1218	1217					0.1332158624740032
ALLMFVKIT	9	Unmodified	_ALLMFVKIT_					0	0	0			REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1394531130791	2	518.317189	1034.61982	1.9148	0.00099249	1.4281	0.00074018	3.3429	0.0017327	518.3185519021107	67.293	2.0668	67.293	66.545	68.612	0					105	65	2	0	0	0	0.11645	1	27911	27911		8.5933	2.8329	1	2452100	+		1001	13966	515	520	1219	1219					0.10389922650097105
ALLMFVKIT	9	Unmodified	_ALLMFVKIT_					0	0	0			REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.317189	1034.61982	2.6165	0.0013562	5.6036	0.0029044	8.2201	0.0042606	518.320683208812	65.709	0.2738	67.108	66.91	67.184	1.3989	-0.25136	0.0037956	NaN	8.5933	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1372200	+		1002	13966	515	520							0.10389922650097105
ALLMFVKIT	9	Unmodified	_ALLMFVKIT_					0	0	0			REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	REV__ENST00000571523.2_1_16:53526376-53526427:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	518.317189	1034.61982	1.8988	0.00098417	1.7037	0.00088308	3.6025	0.0018672	518.3193851061983	65.544	0.31101	67.452	67.248	67.559	1.9085	0.092792	-0.00024712	NaN	8.5933	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1755800	+		1003	13966	515	520							0.10389922650097105
ALLMSPLLL	9	Oxidation (M)	_ALLM(Oxidation (M))SPLLL_		ALLM(1)SPLLL		ALLM(74)SPLLL	0	0	1			REV__nc|ENSG00000156453|Q08174|PCDH1	REV__nc|ENSG00000156453|Q08174|PCDH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8024780154228	2	493.801371	985.58819	4.7656	0.0023533	-1.925	-0.00095055	2.8406	0.0014027	493.800279458403	87.637	0.74863	88.729	88.304	89.052	1.0918					71	23	4	0	0	0	0.04206	1	37026	37026		74.396	7.361	1	10355000	+		1004	10512	516	521	1220	1220		118			0.09481929896173824
ALLNGEYLL	9	Unmodified	_ALLNGEYLL_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2867309451103	2	503.2844	1004.55425	3.5882	0.0018059	0.75092	0.00037793	4.3391	0.0021838	503.28511217634065	72.793	0.53044	74.122	73.913	74.443	1.3297					30	15	3	0	0	0	0.10294	1	30535	30535		48.346	6.2513	1	2668900			1005	784	517	522	1221	1221					0.0521522472874949
ALLNGEYLL	9	Unmodified	_ALLNGEYLL_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1005.565112292767	1	1005.56152	1004.55425	3.5896	0.0036096	0.15765	0.00015853	3.7473	0.0037681	1005.5616958272892	72.754	0.46702	74.084	73.883	74.35	1.3297					32	14	3	0	0	0	0.0092758	2	30541	30541;30600		108	8.1981	1	7131800			1006	784	517	522	1222;1223	1222					0.0521522472874949
ALLNGEYLL	9	Unmodified	_ALLNGEYLL_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1005.564013659954	1	1005.56152	1004.55425	2.9113	0.0029275	1.1009	0.001107	4.0121	0.0040344	1005.5626863231123	72.311	0.46269	74.121	73.89	74.353	1.8101					37	14	3	0	0	0	0.0092758	2	30330	30283;30330		108	8.665	1	9582900			1007	784	517	522	1224;1225	1225					0.0521522472874949
ALLNGEYLL	9	Unmodified	_ALLNGEYLL_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1005.56152	1004.55425	1.8244	0.0018345	0.80877	0.00081327	2.6331	0.0026478	1005.562624452241	74.401	0.3844	74.401	74.173	74.557	0	0.20565	0.0003417	NaN	108	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2585500			1008	784	517	522							0.0521522472874949
ALLNGEYLL	9	Unmodified	_ALLNGEYLL_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1005.56152	1004.55425	2.6684	0.0026832	-0.32927	-0.00033111	2.3391	0.0023521	1005.5614058746072	73.851	0.38379	74.176	74.008	74.391	0.32494	-0.019699	-0.00080268	NaN	108	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2291100			1009	784	517	522							0.0521522472874949
ALLNGEYLLAA	11	Unmodified	_ALLNGEYLLAA_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3215209841728	2	574.321514	1146.62847	2.302	0.0013221	-0.047857	-2.7485E-05	2.2541	0.0012946	574.3202589826162	71.794	0.37495	73.618	73.349	73.724	1.824					19	11	2	0	0	0	0.24984	1	30100	30100		36.127	9.8589	1	1460700			1010	784	518	523	1226	1226					0.061025678202895506
ALLNGEYLLAA	11	Unmodified	_ALLNGEYLLAA_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	574.321514	1146.62847	1.6258	0.00093371	-1.7865	-0.001026	-0.16075	-9.2324E-05	574.3199718410617	73.749	0.27686	73.749	73.611	73.888	0	0.11544	-0.00064729	NaN	36.127	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590330			1011	784	518	523							0.061025678202895506
ALLNGEYLLAA	11	Unmodified	_ALLNGEYLLAA_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	574.321514	1146.62847	2.3316	0.0013391	-1.2097	-0.00069476	1.1219	0.00064431	574.3200487662715	72.205	0.37239	73.535	73.33	73.702	1.3297	-0.099212	1.5243E-05	NaN	36.127	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1216700			1012	784	518	523							0.061025678202895506
ALLNIKDPSQ	10	Unmodified	_ALLNIKDPSQ_					0	0	0		tr|A0A553SG00|A0A553SG00_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_09845PE=4SV=1	tr|A0A553SG00|A0A553SG00_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_09845PE=4SV=1	tr|A0A553SG00|A0A553SG00_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_09845PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	367.2096435427666	3	366.876634	1097.60807	-0.30039	-0.00011021	-0.070364	-2.5815E-05	-0.37075	-0.00013602	367.21009611150794	53.014	0.88647	54.415	53.747	54.633	1.4005					35	27	2	0	0	0	0.8974	1	22253	22253		1.7423	0.78	1	1958500			1013	16088	519	524	1227	1227					0.06317397160455585
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3509094119072	2	506.349877	1010.6852	2.1592	0.0010933	0.20468	0.00010364	2.3638	0.0011969	506.3499304773552	51.432	2.0944	51.432	51.039	53.133	0					152	66	4	0	0	0	0.0080484	17	21427	21345;21388;21427;21464;21505;21556;21597;21652;21705;21758;21807;21859;21907;21966;22034;22085;22136		136.33	56.214	1	20995000		+	1014	1724;342	520	525	1228;1229;1230;1231;1232;1233;1234;1235;1236;1237;1238;1239;1240;1241;1242;1243;1244	1230					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3506652712822	2	506.349877	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.064	1	54.064	53.564	54.564	0								0	0	0	0.3648	1	22537	22537		12.532	2.3482	1			+	1015	1724;342	520	525	1245	1245					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3510009646416	2	506.349877	1010.6852	2.0491	0.0010375	0.22791	0.0001154	2.277	0.001153	506.34997500603134	50.792	1.8623	51.121	50.761	52.623	0.32824					156	59	4	0	0	0	0.0011269	15	21255	21167;21215;21255;21294;21334;21373;21412;21450;21492;21545;21597;21676;21759;21805;21859		164.52	86.366	1	20545000		+	1016	1724;342	520	525	1246;1247;1248;1249;1250;1251;1252;1253;1254;1255;1256;1257;1258;1259;1260	1248					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9030334353447	3	337.902344	1010.6852	1.2096	0.00040872	0.43137	0.00014576	1.641	0.00055448	337.90267796260537	50.894	4.1874	51.222	50.667	54.854	0.32824					299	136	4	0	0	0	0.099302	8	21254	21204;21254;21293;21332;21371;21410;21449;22035		49.554	18.286	1	73757000		+	1017	1724;342	520	525	1261;1262;1263;1264;1265;1266;1267;1268	1262					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3514587283134	2	506.349877	1010.6852	2.043	0.0010345	-1.3354	-0.0006762	0.70755	0.00035827	506.34918699721305	52.528	0.39402	52.854	52.559	52.953	0.32553					18	12	2	0	0	0	0.093059	3	21927	21927;21975;22026		48.346	26.582	1	758670		+	1018	1724;342	520	525	1269;1270;1271	1269					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3512756228447	2	506.349877	1010.6852	2.1512	0.0010892	-0.17474	-8.8478E-05	1.9764	0.0010008	506.349775122846	49.328	0.40408	50.719	50.453	50.857	1.3911					48	12	5	0	0	0	0.00030345	4	20702	20580;20624;20663;20702		171.47	66.668	1	41992000		+	1019	1724;342	520	525	1272;1273;1274;1275	1275					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9029724001884	3	337.902344	1010.6852	0.62518	0.00021125	1.0654	0.00036001	1.6906	0.00057126	337.90305395553224	49.328	0.46674	50.719	50.421	50.888	1.3911					62	14	5	0	0	0	0.12216	4	20587	20587;20637;20676;20715		41.956	18.166	1	137820000		+	1020	1724;342	520	525	1276;1277;1278;1279	1276					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3511535525322	2	506.349877	1010.6852	2.5607	0.0012966	-0.57907	-0.00029321	1.9816	0.0010034	506.349561566468	49.759	2.0316	51.151	50.857	52.889	1.3911					194	65	4	0	0	0	0.0011269	17	20936	20741;20780;20819;20858;20897;20936;20975;21014;21054;21092;21134;21184;21226;21280;21350;21400;21541		164.52	61.091	1	63724000		+	1021	1724;342	520	525	1280;1281;1282;1283;1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295;1296	1285					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9027892947197	3	337.902344	1010.6852	0.93057	0.00031444	0.56867	0.00019215	1.4992	0.0005066	337.90280888412235	49.763	3.8807	51.154	50.888	54.769	1.3911					301	128	4	0	0	0	0.075994	34	21145	20754;20793;20832;20871;20910;20949;20988;21027;21066;21105;21145;21198;21248;21302;21353;21394;21444;21496;21534;21583;21633;21681;21736;21779;21860;21913;21965;22016;22072;22122;22175;22226;22275;22331		57.722	24.936	1	216940000		+	1022	1724;342	520	525	1297;1298;1299;1300;1301;1302;1303;1304;1305;1306;1307;1308;1309;1310;1311;1312;1313;1314;1315;1316;1317;1318;1319;1320;1321;1322;1323;1324;1325;1326;1327;1328;1329;1330	1307					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3515197634697	2	506.349877	1010.6852	1.216	0.00061572	-0.91109	-0.00046133	0.3049	0.00015439	506.34965920915585	51.71	0.78751	53.107	52.894	53.682	1.3966					37	26	2	0	0	0	0.03071	3	21759	21674;21721;21759		96.285	44.016	1	2606700		+	1023	1724;342	520	525	1331;1332;1333	1333					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3496276736259	2	506.349877	1010.6852	1.2903	0.00065332	-0.21671	-0.00010973	1.0735	0.00054359	506.3497768718402	52.393	0.40318	53.789	53.682	54.085	1.3966					20	12	2	0	0	0	0.066197	1	21955	21955		58.679	20.705	1	1757100		+	1024	1724;342	520	525	1334	1334					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9010803103447	3	337.902344	1010.6852	0.21658	7.3184E-05	-0.46057	-0.00015563	-0.24399	-8.2444E-05	337.9021944321095	53.763	1.6618	55.163	54.778	56.44	1.4005					108	59	3	0	0	0	0.11669	10	22379	22379;22416;22504;22585;22638;22687;22730;22796;22847;22897		43.772	17.504	1	6467300		+	1025	1724;342	520	525	1335;1336;1337;1338;1339;1340;1341;1342;1343;1344	1335					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9024230837822	3	337.902344	1010.6852	-0.4974	-0.00016807	-0.74949	-0.00025325	-1.2469	-0.00042133	337.90232854198246	56.4	0.51222	57.815	57.611	58.123	1.4145					25	16	2	0	0	0	0.22861	1	23650	23650		29.841	14.592	1	2258700		+	1026	1724;342	520	525	1345	1345					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9027587771416	3	337.902344	1010.6852	1.8431	0.0006228	-0.04123	-1.3932E-05	1.8019	0.00060887	337.90241037033087	61.442	1.275	62.859	61.931	63.206	1.4177					77	40	2	0	0	0	0.3091	2	25593	25538;25593		24.991	8.8419	1	1169300		+	1027	1724;342	520	525	1346;1347	1347					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9025451540947	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.184	1	56.592	56.092	57.092	1.4086								0	0	0	0.097739	1	23110	23110		34.932	19.193	1			+	1028	1724;342	520	525	1348	1348					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9035522341728	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.567	1	57.981	57.481	58.481	1.4145								0	0	0	0.23225	1	23706	23706		23.79	7.6407	1			+	1029	1724;342	520	525	1349	1349					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9024230837822	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.795	1	58.21	57.71	58.71	1.4145								0	0	0	0.23225	1	23804	23804		23.79	3.3752	1			+	1030	1724;342	520	525	1350	1350					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9027892947197	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.925	1	58.339	57.839	58.839	1.4145								0	0	0	0.16786	1	23858	23858		28.495	8.08	1			+	1031	1724;342	520	525	1351	1351					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9024230837822	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.048	1	58.463	57.963	58.963	1.4145								0	0	0	0.097739	1	23910	23910		34.932	8.6639	1			+	1032	1724;342	520	525	1352	1352					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9020873904228	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.177	1	58.591	58.091	59.091	1.4145								0	0	0	0.062275	1	23967	23967		41.956	21.375	1			+	1033	1724;342	520	525	1353	1353					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9030334353447	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.307	1	58.721	58.221	59.221	1.4145								0	0	0	0.21581	1	24025	24025		24.991	8.4251	1			+	1034	1724;342	520	525	1354	1354					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9030029177666	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.83	1	61.249	60.749	61.749	1.4196								0	0	0	0.42693	1	25088	25088		5.2969	0	1			+	1035	1724;342	520	525	1355	1355					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9041015505791	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.191	1	61.61	61.11	62.11	1.4196								0	0	0	0.34279	1	25244	25244		14.405	6.7964	1			+	1036	1724;342	520	525	1356	1356					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9026672244072	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.803	1	66.21	65.71	66.71	1.4071								0	0	0	0.34279	1	27179	27179		14.405	6.7964	1			+	1037	1724;342	520	525	1357	1357					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3512145876884	2	506.349877	1010.6852	1.9386	0.00098161	-0.041784	-2.1157E-05	1.8968	0.00096045	506.34986291920774	48.709	0.43205	50.686	50.422	50.854	1.9772					45	13	4	0	0	0	0.0051116	3	20455	20357;20404;20455		149.99	60.214	1	45542000		+	1038	1724;342	520	525	1358;1359;1360	1360					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9034301638603	3	337.902344	1010.6852	1.4091	0.00047612	0.33865	0.00011443	1.7477	0.00059055	337.90299317904027	48.728	0.46433	50.705	50.39	50.854	1.9772					59	14	5	0	0	0	0.075994	3	20403	20366;20403;20442		57.722	22.11	1	198180000		+	1039	1724;342	520	525	1361;1362;1363	1362					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9016296267509	3	337.902344	1010.6852	1.0647	0.00035976	0.28151	9.5122E-05	1.3462	0.00045488	337.9026994706104	49.138	2.8271	51.115	50.854	53.681	1.9772					305	95	4	0	0	0	0.075994	26	21509	20481;20520;20559;20598;20715;20754;20793;20832;20871;20910;20949;21004;21053;21095;21148;21198;21250;21301;21340;21385;21426;21470;21509;21558;21597;21666		57.722	24.936	1	169790000		+	1040	1724;342	520	525	1364;1365;1366;1367;1368;1369;1370;1371;1372;1373;1374;1375;1376;1377;1378;1379;1380;1381;1382;1383;1384;1385;1386;1387;1388;1389	1386					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3510314822197	2	506.349877	1010.6852	1.6563	0.00083869	0.25275	0.00012798	1.9091	0.00096667	506.3499760320646	49.049	2.9198	51.026	50.854	53.774	1.9772					219	98	4	0	0	0	0.0080484	19	20585	20495;20534;20585;20624;20663;20703;20741;20783;20836;20886;20925;20965;21017;21067;21122;21175;21324;21435;21524		136.33	58.184	1	37696000		+	1041	1724;342	520	525	1390;1391;1392;1393;1394;1395;1396;1397;1398;1399;1400;1401;1402;1403;1404;1405;1406;1407;1408	1392					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9024230837822	3	337.902344	1010.6852	0.71616	0.00024199	-0.70906	-0.00023959	0.0071028	2.4001E-06	337.90204172664704	51.886	0.86362	53.858	53.457	54.32	1.9722					66	27	3	0	0	0	0.11669	5	21781	21729;21781;21835;21881;21931		43.772	14.732	1	7084000		+	1042	1724;342	520	525	1409;1410;1411;1412;1413	1410					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3514892458916	2	506.349877	1010.6852	1.3169	0.00066681	0.33334	0.00016879	1.6502	0.0008356	506.3498770925852	51.916	0.36913	53.888	53.769	54.138	1.9722					21	11	2	0	0	0	0.099302	1	21850	21850		54.774	26.287	1	1225200		+	1043	1724;342	520	525	1414	1414					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9028503298759	3	337.902344	1010.6852	0.57912	0.00019569	0.02286	7.7243E-06	0.60198	0.00020341	337.902348440513	52.55	0.49411	54.522	54.289	54.783	1.9722					44	16	3	0	0	0	0.11669	3	22023	21974;22023;22075		43.772	17.504	1	5347600		+	1044	1724;342	520	525	1415;1416;1417	1416					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9028808474541	3	337.902344	1010.6852	0.80573	0.00027226	-0.95915	-0.0003241	-0.15343	-5.1844E-05	337.9020696928736	53.54	1.6896	55.509	55.091	56.781	1.9697					119	56	3	0	0	0	0.093059	7	22687	22413;22467;22518;22584;22635;22687;22740		51.63	24.001	1	4336600		+	1045	1724;342	520	525	1418;1419;1420;1421;1422;1423;1424	1423					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9019348025322	3	337.902344	1010.6852	0.50191	0.0001696	-0.5932	-0.00020044	-0.091283	-3.0845E-05	337.9021344541156	56.184	1.1096	58.153	57.583	58.693	1.9684					56	37	2	0	0	0	0.22861	1	23742	23742		29.841	14.592	1	1883000		+	1046	1724;342	520	525	1425	1425					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9025451540947	3	337.902344	1010.6852	0.21358	7.2169E-05	-1.1569	-0.00039092	-0.94332	-0.00031875	337.90192807382687	56.915	0.29976	58.884	58.693	58.992	1.9684					14	9	2	0	0	0	0.22861	1	23895	23895		29.841	9.426	1	1494900		+	1047	1724;342	520	525	1426	1426					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9020568728447	3	337.902344	1010.6852	0.55033	0.00018596	3.3877	0.0011447	3.9381	0.0013307	337.9021429399621	58.018	0.75888	59.987	59.757	60.516	1.969					35	24	2	0	0	0	0.16939	1	24537	24537		36.506	14.916	1	1613000		+	1048	1724;342	520	525	1427	1427					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9016906619072	3	337.902344	1010.6852	2.3291	0.00078701	-0.40962	-0.00013841	1.9195	0.0006486	337.902257376131	59.548	1.3271	61.517	60.844	62.171	1.969					63	42	2	0	0	0	0.22861	2	24904	24904;25177		29.841	9.426	1	1342200		+	1049	1724;342	520	525	1428;1429	1428					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9030639529228	3	337.902344	1010.6852	2.4548	0.00082947	-0.65542	-0.00022147	1.7994	0.00060801	337.9022361876112	60.29	1.3367	62.255	62.105	63.441	1.9653					79	42	2	0	0	0	0.21592	3	25450	25317;25371;25450		31.268	14.155	1	755500		+	1050	1724;342	520	525	1430;1431;1432	1432					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9033691287041	3	337.902344	1010.6852	2.7164	0.00091789	0.18825	6.3611E-05	2.9047	0.0009815	337.9023233029135	112.92	0.64203	113.07	112.96	113.61	0.14912					30	19	2	0	0	0	0.099302	1	48907	48907		49.554	22.331	1	3700400		+	1051	1724;342	520	525	1433	1433					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3514587283134	2	506.349877	1010.6852	3.2369	0.001639	0.92531	0.00046853	4.1622	0.0021075	506.3501184159154	112.92	0.099182	113.07	113.02	113.12	0.14912					4	2	2	0	0	0	0.046715	1	48910	48910		78.149	38.192	1	983000		+	1052	1724;342	520	525	1434	1434					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9018127322197	3	337.902344	1010.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.058	1	55.028	54.528	55.528	1.9697								0	0	0	0.089791	1	22228	22228		36.506	16.092	1			+	1053	1724;342	520	525	1435	1435					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.4722167849541	3	337.902344	1010.6852	1.0764	0.00036371	-1.4192	-0.00047956	-0.34286	-0.00011585	337.9019088261947	65.893	2.275	67.802	67.437	69.712	1.9085					100	73	2	0	0	0	0.11467	1	27984	27984		10.151	2.5416	1	736370		+	1054	1724;342	520	525	1436	1436					0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	337.902344	1010.6852	-1.4286	-0.00048274	-0.85364	-0.00028845	-2.2823	-0.00077119	337.9029028347453	57.752	0.98142	57.752	57.479	58.46	0	-0.18027	-0.00010157	NaN	29.841	37	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	450040		+	1055	1724;342	520	525							0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	337.902344	1010.6852	1.8563	0.00062723	-1.0392	-0.00035115	0.81706	0.00027609	337.9021653293785	57.687	0.34884	58.01	57.887	58.236	0.32299	0.077589	-0.00028966	NaN	29.841	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	576490		+	1056	1724;342	520	525							0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	506.349877	1010.6852	3.4243	0.0017339	1.1308	0.00057256	4.5551	0.0023065	506.35055749008825	112.94	0.15855	113.11	113.01	113.16	0.16915	0.019206	0.00011648	NaN	78.149	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	527950		+	1057	1724;342	520	525							0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	337.902344	1010.6852	0.81256	0.00027457	-0.15973	-5.3974E-05	0.65283	0.00022059	337.9023856764195	66.08	1.5964	67.469	66.871	68.467	1.3888	-0.16648	0.00060337	NaN	10.151	66	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	922040		+	1058	1724;342	520	525							0.18028660167453836
ALLNIKVKL	9	Unmodified	_ALLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	337.902344	1010.6852	0.41439	0.00014002	-4.0155	-0.0013568	-3.6011	-0.0012168	337.9007717663414	52.83	0.11903	54.799	54.78	54.899	1.9697	-0.18198	-0.0030011	NaN	43.772	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5434400		+	1059	1724;342	520	525							0.18028660167453836
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	971.5765258669853	1	971.577174	970.569897	2.6214	0.0025469	-0.56617	-0.00055008	2.0552	0.0019968	971.577066594936	88.271	0.36953	88.506	88.354	88.723	0.2347					22	11	3	0	0	0	0.09539	1	36991	36991		50.855	2.5092	1	1676500			1060	7647	521	526	1437	1437					0.08343511245811897
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2943298220634	2	486.292225	970.569897	3.35	0.0016291	1.2321	0.00059916	4.5821	0.0022282	486.2928663310211	88.289	0.307	88.523	88.354	88.661	0.23471					18	9	2	0	0	0	0.033521	1	37012	37012		81.864	24.393	1	4246800			1061	7647	521	526	1438	1438					0.08343511245811897
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2954894900322	2	486.292225	970.569897	4.5602	0.0022176	1.545	0.00075132	6.1052	0.0029689	486.29304608020675	87.414	0.46395	88.506	88.21	88.674	1.0918					43	14	4	0	0	0	0.01705	3	36869	36819;36869;36927		101.72	28.621	1	13734000			1062	7647	521	526	1439;1440;1441	1440					0.08343511245811897
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5826293826103	1	971.577174	970.569897	4.1726	0.004054	-0.45974	-0.00044667	3.7129	0.0036073	971.5781024566618	87.383	0.33982	88.475	88.335	88.674	1.0918					18	10	2	0	0	0	0.018723	1	36870	36870		100.37	25.442	1	5867400			1063	7647	521	526	1442	1442					0.08343511245811897
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2944824099541	2	486.292225	970.569897	4.6026	0.0022382	0.79119	0.00038475	5.3938	0.002623	486.29269256474123	86.945	0.51991	88.44	88.122	88.642	1.4953					43	16	4	0	0	0	0.006164	2	36660	36616;36660		117.6	28.695	1	8159900			1064	7647	521	526	1443;1444	1444					0.08343511245811897
ALLNILSEV	9	Unmodified	_ALLNILSEV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	971.5806762576103	1	971.577174	970.569897	4.4152	0.0042897	-1.353	-0.0013145	3.0622	0.0029752	971.576929462208	86.959	0.46201	88.454	88.18	88.642	1.4953					34	14	4	0	0	0	0.0092758	2	36638	36638;36688		108	26.107	1	4852500			1065	7647	521	526	1445;1446	1445					0.08343511245811897
ALLPAVPSL	9	Unmodified	_ALLPAVPSL_					0	0	0		nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000184937|P19544-8|WT1;ENSG00000184937|ENST00000452863|WT1	nc|ENSG00000184937|P19544-2|WT1	nc|ENSG00000184937|P19544-2|WT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	880.5518676638603	1	880.550231	879.542954	1.7324	0.0015255	-1.341	-0.0011808	0.39141	0.00034465	880.5497796708829	77.684	0.37135	77.684	77.502	77.873	0					18	11	2	0	0	0	0.34572	1	32384	32384		23.148	3.7094	1	788270			1066	4718	522	527	1447	1447					0.09836447425288952
ALLPAVPSL	9	Unmodified	_ALLPAVPSL_					0	0	0		nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000184937|P19544-8|WT1;ENSG00000184937|ENST00000452863|WT1	nc|ENSG00000184937|P19544-2|WT1	nc|ENSG00000184937|P19544-2|WT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	880.5529052615166	1	880.550231	879.542954	2.4182	0.0021293	0.56427	0.00049686	2.9824	0.0026262	880.5511121325658	76.24	0.3879	77.534	77.311	77.699	1.2938					20	12	2	0	0	0	0.09539	2	31974	31974;32027		50.855	10.406	1	2132500			1067	4718	522	527	1448;1449	1448					0.09836447425288952
ALLPAVPSL	9	Unmodified	_ALLPAVPSL_					0	0	0		nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000184937|P19544-8|WT1;ENSG00000184937|ENST00000452863|WT1	nc|ENSG00000184937|P19544-2|WT1	nc|ENSG00000184937|P19544-2|WT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	880.5496703982353	1	880.550231	879.542954	2.6284	0.0023144	0.30336	0.00026712	2.9317	0.0025815	880.5503475420549	75.754	0.32388	77.521	77.303	77.627	1.7672					19	10	2	0	0	0	0.087207	1	31765	31765		53.576	13.127	1	1681500			1068	4718	522	527	1450	1450					0.09836447425288952
ALLPAVPSL	9	Unmodified	_ALLPAVPSL_					0	0	0		nc|ENSG00000184937|P19544-2|WT1;nc|ENSG00000184937|P19544-3|WT1;nc|ENSG00000184937|P19544-4|WT1;nc|ENSG00000184937|P19544|WT1;nc|ENSG00000184937|P19544-8|WT1;ENSG00000184937|ENST00000452863|WT1	nc|ENSG00000184937|P19544-2|WT1	nc|ENSG00000184937|P19544-2|WT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	880.550231	879.542954	2.0866	0.0018374	-1.3599	-0.0011975	0.72669	0.00063989	880.5494561958852	77.251	0.37794	77.567	77.323	77.701	0.31653	-0.0092279	-0.00089551	NaN	53.576	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	760870			1069	4718	522	527							0.09836447425288952
ALLPELREV	9	Unmodified	_ALLPELREV_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.3092529177666	2	520.310949	1038.60735	2.1284	0.0011074	-1.5921	-0.0008284	0.53623	0.000279	520.3097896901037	55.48	0.43894	55.48	55.243	55.682	0					38	16	3	0	0	0	0.41572	1	23089	23089		26.268	3.1197	1	4655200			1070	4130	523	528	1451	1451					0.08958602511415847
ALLPELREV	9	Unmodified	_ALLPELREV_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.3116332888603	2	520.310949	1038.60735	2.1741	0.0011312	-1.7935	-0.0009332	0.38058	0.00019802	520.309792028562	54.937	0.49564	55.258	54.936	55.432	0.32088					41	17	3	0	0	0	0.41572	2	22954	22954;22993		26.268	3.5319	1	4937200			1071	4130	523	528	1452;1453	1452					0.08958602511415847
ALLPELREV	9	Unmodified	_ALLPELREV_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3102294802666	2	520.310949	1038.60735	1.2804	0.00066619	-2.1087	-0.0010972	-0.82829	-0.00043097	520.3096099390854	53.687	0.50824	55.088	54.778	55.286	1.4005					52	21	3	0	0	0	0.10478	3	22386	22386;22431;22480		60.074	16.216	1	16376000			1072	4130	523	528	1454;1455;1456	1454					0.08958602511415847
ALLPELREV	9	Unmodified	_ALLPELREV_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3101684451103	2	520.310949	1038.60735	0.79671	0.00041454	-2.1481	-0.0011177	-1.3514	-0.00070312	520.3096209763826	53.081	0.50118	55.051	54.793	55.295	1.9697					64	26	3	0	0	0	0.16434	2	22269	22224;22269		47.749	11.622	1	14616000			1073	4130	523	528	1457;1458	1458					0.08958602511415847
ALLPIFFGA	9	Unmodified	_ALLPIFFGA_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000460225.5_2_20:30102453-30132761:+|nuORF;nc|ENSG00000101294|Q8TCT9-5|HM13	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	948.5576049685478	1	948.555316	947.54804	1.4024	0.0013303	0.85904	0.00081485	2.2615	0.0021451	948.5558380408801	97.305	0.12454	97.305	97.228	97.353	0					6	3	2	0	0	0	0.051525	1	40677	40677		67.413	21.663	1	5154500			1074	1333	524	529	1459	1459					0.07216751287899115
ALLPIFFGA	9	Unmodified	_ALLPIFFGA_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000460225.5_2_20:30102453-30132761:+|nuORF;nc|ENSG00000101294|Q8TCT9-5|HM13	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.5575439333916	1	948.555316	947.54804	2.7589	0.002617	-1.355	-0.0012853	1.4039	0.0013317	948.5544995998789	97.197	0.15565	97.288	97.18	97.335	0.090881					6	4	2	0	0	0	0.08022	1	40679	40679		56.048	13.08	1	3521100			1075	1333	524	529	1460	1460					0.07216751287899115
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	986.5957519412041	1	986.592096	985.584819	2.3993	0.0023671	-0.055569	-5.4824E-05	2.3437	0.0023123	986.5927214771613	89.006	0.35025	89.006	88.827	89.178	0					24	10	3	0	0	0	0.030843	2	37214	37164;37214		86.121	25.732	1	2431700			1076	158	525	530	1461;1462	1462					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.8010131716728	2	493.799686	985.584819	2.114	0.0010439	0.21946	0.00010837	2.3334	0.0011523	493.79981196002655	88.972	0.47832	88.972	88.795	89.274	0					27	14	2	0	0	0	0.030843	3	37222	37175;37222;37261		86.121	22.558	1	3245500			1077	158	525	530	1463;1464;1465	1464					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	986.5985595583916	1	986.592096	985.584819	2.7271	0.0026906	-0.38017	-0.00037507	2.347	0.0023155	986.5911456837645	88.539	0.40875	88.773	88.508	88.917	0.23471					23	12	3	0	0	0	0.033521	2	37083	37083;37140		81.864	21.474	1	2981300			1078	158	525	530	1466;1467	1466					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.8020507693291	2	493.799686	985.584819	3.2701	0.0016148	0.55863	0.00027585	3.8288	0.0018906	493.8001250714588	88.569	0.50657	88.804	88.508	89.015	0.23471					35	15	3	0	0	0	0.030843	2	37131	37088;37131		86.121	24.869	1	2823500			1079	158	525	530	1468;1469	1469					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8026916384697	2	493.799686	985.584819	4.7656	0.0023533	1.4882	0.00073486	6.2538	0.0030881	493.800279458403	87.637	0.74863	88.729	88.304	89.052	1.0918					71	23	4	0	0	0	0.010702	2	36985	36937;36985		106.85	24.981	1	10355000			1080	158	525	530	1470;1471	1471					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8020202517509	2	493.799686	985.584819	4.7328	0.0023371	0.27726	0.00013691	5.0101	0.002474	493.7997877458033	87.144	0.58792	88.639	88.395	88.983	1.4953					53	18	4	0	0	0	0.02596	3	36754	36705;36754;36806		93.883	23.168	1	7586600			1081	158	525	530	1472;1473;1474	1473					0.09145003113803796
ALLPLSPYL	9	Unmodified	_ALLPLSPYL_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.5910522341728	1	986.592096	985.584819	5.0302	0.0049627	-3.6449	-0.0035961	1.3852	0.0013667	986.5874163802454	87.192	0.46294	88.687	88.456	88.919	1.4953					30	14	3	0	0	0	0.0052927	2	36788	36738;36788		120.86	50.141	1	7587600			1082	158	525	530	1475;1476	1476					0.09145003113803796
ALLPRLQA	8	Unmodified	_ALLPRLQA_					0	0	0			REV__ENST00000586439.1_1_19:36604659-36605969:-|nuORF	REV__ENST00000586439.1_1_19:36604659-36605969:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2827026247978	2	441.281995	880.549437	2.5569	0.0011283	-1.1636	-0.00051349	1.3932	0.0006148	441.2812137255309	41.185	0.53616	42.511	42.178	42.715	1.3254					35	16	3	0	0	0	0.5808	1	17274	17274		42.095	6.0504	1	2231800	+		1083	14031	526	531	1477	1477					0.10438385376653514
ALLPRSVHV	9	Unmodified	_ALLPRSVHV_					0	0	0			REV__ENST00000606525.5_1_20:32250043-32250439:-|nuORF	REV__ENST00000606525.5_1_20:32250043-32250439:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3068420290947	2	496.306001	990.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.635	1	66.563	66.063	67.063	1.928								0	0	0	0.36184	1	27113	27113		12.532	3.9383	1		+		1084	14139	527	532	1478	1478					0.10177459296698999
ALLPSSPGGPL	11	Unmodified	_ALLPSSPGGPL_					0	0	0			REV__ENST00000220003.13_1_15:75074890-75075013:+|nuORF	REV__ENST00000220003.13_1_15:75074890-75075013:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.7923156619072	2	504.78985	1007.56515	3.0122	0.0015205	2.1905	0.0011058	5.2028	0.0026263	504.7907736242265	88.519	0.38374	88.753	88.598	88.982	0.2347					16	11	2	0	0	0	0.50052	1	37094	37094		24.021	0.87215	1	844150	+		1085	12080	528	533	1479	1479					0.06166627103038991
ALLPSSPGGPL	11	Unmodified	_ALLPSSPGGPL_					0	0	0			REV__ENST00000220003.13_1_15:75074890-75075013:+|nuORF	REV__ENST00000220003.13_1_15:75074890-75075013:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7939330935478	2	504.78985	1007.56515	4.9947	0.0025213	3.0493	0.0015393	8.044	0.0040605	504.7911886328887	87.655	0.37266	88.747	88.553	88.926	1.0918					29	11	4	0	0	0	0.2718	1	36953	36953		34.402	0.29928	1	2478900	+		1086	12080	528	533	1480	1480					0.06166627103038991
ALLPSSPTL	9	Unmodified	_ALLPSSPTL_					0	0	0		ENST00000547374.5_1_14:105676890-105677657:-|nuORF;ENST00000546997.1_1_14:105676890-105678659:-|nuORF;nc|ENSG00000185024|Q92994-9|BRF1;nc|ENSG00000185024|Q92994-3|BRF1;nc|ENSG00000185024|Q92994-7|BRF1;nc|ENSG00000185024|Q92994-8|BRF1;nc|ENSG00000185024|Q92994-5|BRF1;ENSG00000185024|ENST00000547530|BRF1	ENST00000547374.5_1_14:105676890-105677657:-|nuORF	ENST00000547374.5_1_14:105676890-105677657:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	898.5254394412041	1	898.52441	897.517133	1.1077	0.00099529	-1.1716	-0.0010527	-0.063946	-5.7457E-05	898.523350480192	57.132	0.23695	58.546	58.4	58.637	1.4145					10	7	2	0	0	0	0.0082953	1	23954	23954		109.63	38.914	1	1278000			1087	4727	529	534	1481	1481					0.06427553183004875
ALLPSSPTL	9	Unmodified	_ALLPSSPTL_					0	0	0		ENST00000547374.5_1_14:105676890-105677657:-|nuORF;ENST00000546997.1_1_14:105676890-105678659:-|nuORF;nc|ENSG00000185024|Q92994-9|BRF1;nc|ENSG00000185024|Q92994-3|BRF1;nc|ENSG00000185024|Q92994-7|BRF1;nc|ENSG00000185024|Q92994-8|BRF1;nc|ENSG00000185024|Q92994-5|BRF1;ENSG00000185024|ENST00000547530|BRF1	ENST00000547374.5_1_14:105676890-105677657:-|nuORF	ENST00000547374.5_1_14:105676890-105677657:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	898.5251342654228	1	898.52441	897.517133	0.77675	0.00069793	-1.0433	-0.0009374	-0.26651	-0.00023947	898.5240029901523	56.52	0.26772	58.488	58.394	58.662	1.9684					11	8	2	0	0	0	0.0082953	1	23735	23735		109.63	38.914	1	1061900			1088	4727	529	534	1482	1482					0.06427553183004875
ALLQDVPIN	9	Unmodified	_ALLQDVPIN_					0	0	0			REV__tr|A0A553SF41|A0A553SF41_NIACIRibose-phosphatepyrophosphokinaseOS=NialliacirculansOX=1397GN=prsPE=3SV=1	REV__tr|A0A553SF41|A0A553SF41_NIACIRibose-phosphatepyrophosphokinaseOS=NialliacirculansOX=1397GN=prsPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7843200564384	2	491.782025	981.549496	2.6172	0.0012871	-1.0335	-0.00050827	1.5837	0.00077884	491.7816139064399	66.123	0.38243	66.447	66.24	66.622	0.32449					20	11	2	0	0	0	0.27148	1	27642	27642		26.884	1.4843	1	1485300	+		1089	14687	530	535	1483	1483					0.05798340585988626
ALLQEIVNI	9	Unmodified	_ALLQEIVNI_					0	0	0		nc|ENSG00000144580|Q92600-3|CNOT9;ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.8059875369072	2	506.8055	1011.59645	2.3289	0.0011803	-0.70238	-0.00035597	1.6265	0.00082434	506.80473923811354	81.135	0.33961	81.426	81.245	81.584	0.29055					15	10	2	0	0	0	0.13873	1	33936	33936		39.957	18.211	1	901840			1090	3082	531	536	1484	1484					0.0911120013714708
ALLQEIVNI	9	Unmodified	_ALLQEIVNI_					0	0	0		nc|ENSG00000144580|Q92600-3|CNOT9;ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8074218630791	2	506.8055	1011.59645	2.921	0.0014804	1.3637	0.00069115	4.2848	0.0021716	506.8061415370511	80.216	0.31268	81.467	81.263	81.575	1.2512					18	9	2	0	0	0	0.15635	1	33653	33653		37.974	7.3375	1	1712200			1091	3082	531	536	1485	1485					0.0911120013714708
ALLQEIVNI	9	Unmodified	_ALLQEIVNI_					0	0	0		nc|ENSG00000144580|Q92600-3|CNOT9;ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8073913455009	2	506.8055	1011.59645	1.497	0.00075869	1.9884	0.0010077	3.4854	0.0017664	506.8065372045003	79.681	0.3391	81.398	81.229	81.568	1.7167					19	10	2	0	0	0	0.13873	2	33415	33415;33469		39.957	12.329	1	1134300			1092	3082	531	536	1486;1487	1486					0.0911120013714708
ALLQEIVNI	9	Unmodified	_ALLQEIVNI_					0	0	0		nc|ENSG00000144580|Q92600-3|CNOT9;ENSG00000144580|ENST00000273064|CNOT9;nc|ENSG00000144580|Q92600-2|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	nc|ENSG00000144580|Q92600-3|CNOT9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	506.8055	1011.59645	2.2206	0.0011254	-5.6299	-0.0028533	-3.4092	-0.0017278	506.80399734475384	81.576	0.14388	81.576	81.527	81.671	0	0.1094	-0.0067685	NaN	39.957	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1095900			1093	3082	531	536							0.0911120013714708
ALLQEQQEL	9	Unmodified	_ALLQEQQEL_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2900268435478	2	536.287671	1070.56079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.207	1	99.404	98.904	99.904	0.19767								0	0	0	0.091705	1	41764	41764		36.127	0.082828	1		+		1094	9933	532	537	1488	1488					0.028331178894632103
ALLQSVRRPR	10	Unmodified	_ALLQSVRRPR_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2517272830009	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.848	1	76.154	75.654	76.654	1.3063								0	0	0	0.66141	1	31415	31415		2.086	0	1				1095	4079	533	538	1489	1489					0.14134698402403956
ALLQYTKA	8	Unmodified	_ALLQYTKA_					0	0	0			REV__ENSG00000105851|ENST00000496166|PIK3CG	REV__ENSG00000105851|ENST00000496166|PIK3CG	MSMS	GG20161007_CRH_Patient100_A02_01	1	454.2655212283134	2	454.26601	906.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.464	1	94.464	93.964	94.964	0								0	0	0	1.0178	1	39479	39479		0.69038	0	1		+		1096	9192	534	539	1490	1490					0.060469729028341135
ALLSGIVSI	9	Unmodified	_ALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	872.5468017458916	1	872.545145	871.537869	1.7108	0.0014928	-0.75872	-0.00066202	0.95211	0.00083076	872.5444890167948	78.831	0.39501	78.831	78.629	79.024	0					29	12	3	0	0	0	0.0075027	2	32818	32818;32879		112.59	12.222	1	5079200			1097	4270	535	540	1491;1492	1491					0.09696143562666748
ALLSGIVSI	9	Unmodified	_ALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	872.5468017458916	1	872.545145	871.537869	1.8191	0.0015873	-0.31291	-0.00027303	1.5062	0.0013142	872.544802912415	78.347	0.41131	78.657	78.453	78.864	0.30933					28	12	3	0	0	0	0.0082953	1	32773	32773		109.63	12.555	1	4559400			1098	4270	535	540	1493	1493					0.09696143562666748
ALLSGIVSI	9	Unmodified	_ALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	872.5463134646416	1	872.545145	871.537869	2.4149	0.0021072	0.28656	0.00025004	2.7015	0.0023572	872.5451011801132	77.335	0.44575	78.616	78.41	78.856	1.2809					31	13	3	0	0	0	0.03795	1	32416	32416		77.984	10.64	1	11248000			1099	4270	535	540	1494	1494					0.09696143562666748
ALLSGIVSI	9	Unmodified	_ALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	872.5483276247978	1	872.545145	871.537869	1.9024	0.0016599	0.11597	0.00010119	2.0184	0.0017611	872.5452073557268	76.827	0.41489	78.594	78.386	78.801	1.7672					31	12	3	0	0	0	0.006164	3	32192	32192;32239;32278		117.6	20.524	1	9988700			1100	4270	535	540	1495;1496;1497	1495					0.09696143562666748
ALLSIIATV	9	Unmodified	_ALLSIIATV_					0	0	0		ENST00000452360.6_1_4:941527-942053:+|nuORF;ENST00000505734.1_1_4:941527-942022:+|nuORF;ENST00000515876.5_1_4:941527-949679:+|nuORF;TMEM175|p.F250Gfs*48|1|0.13|ENSG00000127419|chr4:955795-955796|-/GGGTTCCACCCAGGGTC|frameshift_variant;ENSG00000127419|ENST00000264771|TMEM175	ENST00000452360.6_1_4:941527-942053:+|nuORF	ENST00000452360.6_1_4:941527-942053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7948181033134	2	450.791861	899.569169	3.0744	0.0013859	2.1639	0.00097547	5.2383	0.0023614	450.7925773481008	84.609	0.35361	84.869	84.693	85.047	0.26083					16	10	2	0	0	0	0.10722	1	35354	35354		46.921	2.5139	1	1097400			1101	2333	536	541	1498	1498					0.11536716596754104
ALLSIIATV	9	Unmodified	_ALLSIIATV_					0	0	0		ENST00000452360.6_1_4:941527-942053:+|nuORF;ENST00000505734.1_1_4:941527-942022:+|nuORF;ENST00000515876.5_1_4:941527-949679:+|nuORF;TMEM175|p.F250Gfs*48|1|0.13|ENSG00000127419|chr4:955795-955796|-/GGGTTCCACCCAGGGTC|frameshift_variant;ENSG00000127419|ENST00000264771|TMEM175	ENST00000452360.6_1_4:941527-942053:+|nuORF	ENST00000452360.6_1_4:941527-942053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7930175662041	2	450.791861	899.569169	1.8191	0.00082004	0.5686	0.00025632	2.3877	0.0010764	450.79212154175656	83.646	0.37718	84.834	84.673	85.05	1.1879					29	11	3	0	0	0	0.033521	3	35078	35078;35126;35184		81.864	11.149	1	4229700			1102	2333	536	541	1499;1500;1501	1499					0.11536716596754104
ALLSIIATV	9	Unmodified	_ALLSIIATV_					0	0	0		ENST00000452360.6_1_4:941527-942053:+|nuORF;ENST00000505734.1_1_4:941527-942022:+|nuORF;ENST00000515876.5_1_4:941527-949679:+|nuORF;TMEM175|p.F250Gfs*48|1|0.13|ENSG00000127419|chr4:955795-955796|-/GGGTTCCACCCAGGGTC|frameshift_variant;ENSG00000127419|ENST00000264771|TMEM175	ENST00000452360.6_1_4:941527-942053:+|nuORF	ENST00000452360.6_1_4:941527-942053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7935058474541	2	450.791861	899.569169	2.1559	0.00097187	2.3185	0.0010452	4.4745	0.002017	450.7928787549493	83.169	0.31586	84.806	84.694	85.01	1.6379					23	9	3	0	0	0	0.061246	1	34933	34933		63.563	3.1733	1	2412900			1103	2333	536	541	1502	1502					0.11536716596754104
ALLSIIATV	9	Unmodified	_ALLSIIATV_					0	0	0		ENST00000452360.6_1_4:941527-942053:+|nuORF;ENST00000505734.1_1_4:941527-942022:+|nuORF;ENST00000515876.5_1_4:941527-949679:+|nuORF;TMEM175|p.F250Gfs*48|1|0.13|ENSG00000127419|chr4:955795-955796|-/GGGTTCCACCCAGGGTC|frameshift_variant;ENSG00000127419|ENST00000264771|TMEM175	ENST00000452360.6_1_4:941527-942053:+|nuORF	ENST00000452360.6_1_4:941527-942053:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	450.791861	899.569169	2.4004	0.0010821	1.6893	0.00076151	4.0896	0.0018436	450.79303376233236	85.093	0.35173	85.093	84.94	85.292	0	0.19204	0.00023753	NaN	81.864	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1249300			1104	2333	536	541							0.11536716596754104
ALLSKMVLI	9	Unmodified	_ALLSKMVLI_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3199645876884	2	494.317189	986.619824	3.1252	0.0015448	1.3005	0.00064286	4.4257	0.0021877	494.3186750117108	64.761	0.24693	66.168	66.016	66.263	1.4071					15	7	3	0	0	0	0.23535	1	27177	27177		29.082	3.6823	1	873330			1105	5095	537	542	1503	1503					0.12597922650115834
ALLSKMVLI	9	Unmodified	_ALLSKMVLI_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	494.317189	986.619824	2.5928	0.0012816	1.9052	0.00094179	4.498	0.0022234	494.318615731724	64.247	0.25204	66.175	65.981	66.233	1.928	0.0037714	0.0002489	NaN	29.082	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	468940			1106	5095	537	542							0.12597922650115834
ALLSLDPAAV	10	Unmodified	_ALLSLDPAAV_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.5607787966728	1	969.561524	968.554247	1.7558	0.0017023	-0.86364	-0.00083735	0.89215	0.000865	969.5609882569552	69.378	0.26229	70.743	70.614	70.876	1.3657					11	8	2	0	0	0	0.04351	1	29118	29118		81.613	33.267	1	3001700			1107	5388	538	543	1504	1504					0.06871224728740799
ALLSLDPAAV	10	Unmodified	_ALLSLDPAAV_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	969.5641357302666	1	969.561524	968.554247	1.1767	0.0011409	0.17492	0.00016959	1.3516	0.0013105	969.5624187635373	68.861	0.2677	70.714	70.588	70.856	1.853					14	8	2	0	0	0	0.068389	1	28934	28934		71.134	33.16	1	1493900			1108	5388	538	543	1505	1505					0.06871224728740799
ALLSRLEQI	9	Unmodified	_ALLSRLEQI_					0	0	0		ENST00000481580.1_1_20:32664521-32665129:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY;RALY|p.A212P|1|0.19|ENSG00000125970|chr20:34076791-34076791|G/C|missense_variant	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.8177978396416	2	521.816399	1041.61824	2.1879	0.0011417	-0.68329	-0.00035655	1.5046	0.00078513	521.8162379163764	52.987	0.28455	52.987	52.821	53.106	0					12	8	2	0	0	0	0.053939	1	22112	22112		66.457	18.708	1	1576600			1109	2294	539	544	1506	1506					0.09910004885705348
ALLSRLEQI	9	Unmodified	_ALLSRLEQI_					0	0	0		ENST00000481580.1_1_20:32664521-32665129:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY;RALY|p.A212P|1|0.19|ENSG00000125970|chr20:34076791-34076791|G/C|missense_variant	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.8170654177666	2	521.816399	1041.61824	1.8761	0.00097899	1.7655	0.00092124	3.6416	0.0019002	521.8171103108672	52.392	0.31169	52.718	52.528	52.84	0.32553					19	9	3	0	0	0	0.053939	1	21941	21941		66.457	5.0992	1	1271500			1110	2294	539	544	1507	1507					0.09910004885705348
ALLSRLEQI	9	Unmodified	_ALLSRLEQI_					0	0	0		ENST00000481580.1_1_20:32664521-32665129:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY;RALY|p.A212P|1|0.19|ENSG00000125970|chr20:34076791-34076791|G/C|missense_variant	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.8180419802666	2	521.816399	1041.61824	0.85471	0.000446	1.875	0.00097842	2.7297	0.0014244	521.8177069757605	51.058	0.3642	52.452	52.257	52.621	1.3938					25	11	3	0	0	0	0.014947	2	21397	21345;21397		103.42	21.806	1	7197100			1111	2294	539	544	1508;1509	1509					0.09910004885705348
ALLSRLEQI	9	Unmodified	_ALLSRLEQI_					0	0	0		ENST00000481580.1_1_20:32664521-32665129:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY;RALY|p.A212P|1|0.19|ENSG00000125970|chr20:34076791-34076791|G/C|missense_variant	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	ENST00000481580.1_1_20:32664521-32665129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8161498904228	2	521.816399	1041.61824	0.87927	0.00045882	-0.27373	-0.00014284	0.60554	0.00031598	521.8165087801532	50.465	0.32756	52.44	52.248	52.575	1.9753					23	10	3	0	0	0	0.026411	2	21129	21129;21173		93.166	1.5132	1	7012300			1112	2294	539	544	1510;1511	1510					0.09910004885705348
ALLSWINPF	9	Unmodified	_ALLSWINPF_					0	0	0			REV__ENST00000467576.1_1_6:31743192-31744939:-|nuORF	REV__ENST00000467576.1_1_6:31743192-31744939:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.3317138552666	2	530.794935	1059.57532	3.3191	0.0017618	-0.2037	-0.00010812	3.1154	0.0016536	530.7949997591578	60.06	0.34492	62.026	61.822	62.167	1.9653					18	10	2	0	0	0	0.11071	1	25203	25203		15.847	1.0089	1	1628000	+		1113	11779	540	545	1512	1512					0.04791234828257984
ALLSWYSAA	9	Unmodified	_ALLSWYSAA_					0	0	0			REV__SLC39A11-PITPNC1|1|fusion	REV__SLC39A11-PITPNC1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2558471560478	2	491.255643	980.496732	2.347	0.001153	-1.5009	-0.00073731	0.84608	0.00041564	491.2554373642322	39.878	0.36377	40.19	39.986	40.35	0.31263					27	11	3	0	0	0	0.1735	1	16733	16733		36.044	0	1	2151600	+		1114	14626	541	546	1513	1513					0.005703825231762494
ALLSWYSAA	9	Unmodified	_ALLSWYSAA_					0	0	0			REV__SLC39A11-PITPNC1|1|fusion	REV__SLC39A11-PITPNC1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2564269900322	2	491.255643	980.496732	1.0947	0.0005378	-0.38362	-0.00018846	0.71112	0.00034934	491.2557353583561	38.139	0.52354	39.959	39.67	40.193	1.8202					37	16	3	0	0	0	0.087207	2	15978	15978;16027		53.576	0	1	8260000	+		1115	14626	541	546	1514;1515	1514					0.005703825231762494
ALLSWYSAA	9	Unmodified	_ALLSWYSAA_					0	0	0			REV__SLC39A11-PITPNC1|1|fusion	REV__SLC39A11-PITPNC1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	490.7270385622978	2	491.255643	980.496732	1.0947	0.0005378	-0.38362	-0.00018846	0.71112	0.00034934	491.2557353583561	38.139	0.52354	39.959	39.67	40.193	1.8202					37	16	3	0	0	0	0.10844	1	16075	16075		16.942	0	1	8260000	+		1116	14626	541	546	1516	1516					0.005703825231762494
ALLSYTVSL	9	Unmodified	_ALLSYTVSL_					0	0	0			REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.7777892947197	2	483.778951	965.543348	2.6351	0.0012748	-1.5366	-0.00074338	1.0985	0.00053141	483.7779962091724	77.113	0.32013	78.394	78.249	78.569	1.2809					16	9	2	0	0	0	0.10294	1	32376	32376		48.346	0	1	1148200	+		1117	12100	542	547	1517	1517					0.05919822354462667
ALLSYTVSL	9	Unmodified	_ALLSYTVSL_					0	0	0			REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.7787353396416	2	483.778951	965.543348	2.2281	0.0010779	-1.9932	-0.00096428	0.23491	0.00011364	483.7777536992857	76.645	0.32225	78.412	78.222	78.545	1.7672					16	9	2	0	0	0	0.10294	1	32131	32131		48.346	0	1	1048500	+		1118	12100	542	547	1518	1518					0.05919822354462667
ALLSYTVSL	9	Unmodified	_ALLSYTVSL_					0	0	0			REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	483.778951	965.543348	2.5979	0.0012568	0.71088	0.00034391	3.3088	0.0016007	483.77816700097554	78.142	0.19298	78.451	78.323	78.516	0.30933	0.031952	0.0023035	NaN	48.346	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323130	+		1119	12100	542	547							0.05919822354462667
ALLSYTVSL	9	Unmodified	_ALLSYTVSL_					0	0	0			REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	REV__ENST00000230122.3_1_6:109787643-109787670:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	483.778951	965.543348	2.6351	0.0012748	-1.5366	-0.00074338	1.0985	0.00053141	483.7779962091724	77.113	0.32013	78.394	78.249	78.569	1.2809	-0.025253	0.00012891	NaN	48.346	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1148200	+		1120	12100	542	547							0.05919822354462667
ALLTFMEQV	9	Unmodified	_ALLTFMEQV_					0	0	0		nc|ENSG00000106624|Q8IUX7-2|AEBP1;ENSG00000106624|ENST00000223357|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2797729372978	2	526.27826	1050.54197	2.0352	0.0010711	-0.050448	-2.655E-05	1.9848	0.0010445	526.2781607561965	80.55	0.37605	80.55	80.321	80.697	0					24	11	4	0	0	0	0.20838	2	33548	33503;33548		32.117	18.609	1	1540400			1121	1576	543	548	1519;1520	1520					0.018718649940637988
ALLTFMEQV	9	Unmodified	_ALLTFMEQV_					0	0	0		nc|ENSG00000106624|Q8IUX7-2|AEBP1;ENSG00000106624|ENST00000223357|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.2795898318291	2	526.27826	1050.54197	2.0264	0.0010665	-0.20871	-0.00010984	1.8177	0.00095663	526.2780368254467	80.048	0.40813	80.348	80.163	80.571	0.30047					22	12	2	0	0	0	0.10722	2	33476	33429;33476		46.921	22.247	1	1385600			1122	1576	543	548	1521;1522	1522					0.018718649940637988
ALLTFMEQV	9	Unmodified	_ALLTFMEQV_					0	0	0		nc|ENSG00000106624|Q8IUX7-2|AEBP1;ENSG00000106624|ENST00000223357|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2798339724541	2	526.27826	1050.54197	2.8421	0.0014958	-0.13891	-7.3106E-05	2.7032	0.0014227	526.2783285472527	79.094	0.53142	80.36	80.066	80.598	1.2668					47	16	4	0	0	0	0.002761	3	33194	33148;33194;33249		128.37	71.824	1	7715200			1123	1576	543	548	1523;1524;1525	1524					0.018718649940637988
ALLTFMEQV	9	Unmodified	_ALLTFMEQV_					0	0	0		nc|ENSG00000106624|Q8IUX7-2|AEBP1;ENSG00000106624|ENST00000223357|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	nc|ENSG00000106624|Q8IUX7-2|AEBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2784911990166	2	526.27826	1050.54197	2.3974	0.0012617	0.29803	0.00015685	2.6954	0.0014185	526.278440587182	78.538	0.52637	80.273	80.04	80.567	1.735					47	16	4	0	0	0	0.0037165	3	32924	32924;32971;33025		125.62	73.356	1	8907900			1124	1576	543	548	1526;1527;1528	1526					0.018718649940637988
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2971679568291	2	525.297507	1048.58046	1.9988	0.00105	-1.832	-0.00096234	0.16684	8.7643E-05	525.2965960978577	76.359	0.45702	76.359	76.135	76.592	0					40	14	4	0	0	0	0.0075027	3	31766	31721;31766;31819		112.59	30.98	1	16233000			1125	1111	544	549	1529;1530;1531	1530					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1049.586352527142	1	1049.58774	1048.58046	1.8812	0.0019745	-0.87149	-0.00091471	1.0098	0.0010598	1049.5866479520234	76.377	0.30116	76.377	76.196	76.497	0					17	9	2	0	0	0	0.069258	1	31775	31775		60.39	6.814	1	1543400			1126	1111	544	549	1532	1532					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.2988769412041	2	525.297507	1048.58046	2.5143	0.0013208	-0.46205	-0.00024272	2.0522	0.001078	525.2972138650881	75.884	0.4659	76.206	75.988	76.453	0.32163					43	14	4	0	0	0	0.0075027	3	31723	31723;31773;31828		112.59	34.609	1	12545000			1127	1111	544	549	1533;1534;1535	1533					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1049.590991199017	1	1049.58774	1048.58046	2.8883	0.0030315	-1.7394	-0.0018256	1.1489	0.0012059	1049.5878203162904	75.996	0.31257	76.318	76.081	76.393	0.32163					17	9	2	0	0	0	0.046276	1	31741	31741		70.716	7.1527	1	1007000			1128	1111	544	549	1536	1536					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1049.593188464642	1	1049.58774	1048.58046	3.1206	0.0032753	0.45985	0.00048265	3.5804	0.003758	1049.5887656515179	74.86	0.31501	76.166	75.996	76.311	1.3063					23	9	3	0	0	0	0.031324	3	31424	31380;31424;31468		85.357	18.013	1	4673000			1129	1111	544	549	1537;1538;1539	1538					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2993041872978	2	525.297507	1048.58046	3.124	0.001641	0.74115	0.00038932	3.8652	0.0020304	525.2978921478136	74.86	0.52992	76.166	75.905	76.435	1.3063					28	16	2	0	0	0	0.002761	3	31397	31397;31434;31473		128.37	46.475	1	39666000			1130	1111	544	549	1540;1541;1542	1540					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1049.595629870892	1	1049.58774	1048.58046	3.8713	0.0040633	-1.4575	-0.0015298	2.4138	0.0025335	1049.586972449588	74.423	0.31777	76.219	76.021	76.339	1.7962					24	9	3	0	0	0	0.0075027	2	31242	31190;31242		112.59	30.98	1	2805200			1131	1111	544	549	1543;1544	1544					0.05811493900228015
ALLTYLEQV	9	Unmodified	_ALLTYLEQV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2986938357353	2	525.297507	1048.58046	2.9529	0.0015511	-0.21525	-0.00011307	2.7376	0.0014381	525.2973412710564	74.429	0.53622	76.225	75.929	76.465	1.7962					29	16	2	0	0	0	0.002761	3	31198	31198;31237;31276		128.37	46.752	1	24818000			1132	1111	544	549	1545;1546;1547	1545					0.05811493900228015
ALLVAQIYL	9	Unmodified	_ALLVAQIYL_					0	0	0		ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.3133422732353	2	502.312961	1002.61137	3.1211	0.0015677	-1.786	-0.00089713	1.3351	0.00067062	502.3111364000877	88.569	0.3499	88.804	88.567	88.917	0.23471					16	10	2	0	0	0	0.51832	1	37148	37148		14.582	0	1	1268200			1133	7487	545	550	1548	1548					0.11016692005114237
ALLVAQIYL	9	Unmodified	_ALLVAQIYL_					0	0	0		ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3153869509697	2	502.312961	1002.61137	4.8848	0.0024537	-0.035619	-1.7892E-05	4.8492	0.0024358	502.31239954268625	87.659	0.37352	88.75	88.521	88.895	1.0918					27	11	3	0	0	0	0.51832	1	36973	36973		14.582	0	1	3546300			1134	7487	545	550	1549	1549					0.11016692005114237
ALLVAQIYL	9	Unmodified	_ALLVAQIYL_					0	0	0		ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	ENST00000591565.1_1_19:14515197-14515620:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.3147765994072	2	502.312961	1002.61137	4.3949	0.0022076	-0.77563	-0.00038961	3.6193	0.001818	502.3124026773802	87.223	0.36914	88.718	88.487	88.856	1.4953					31	11	3	0	0	0	0.51832	1	36779	36779		14.582	0	1	2949100			1135	7487	545	550	1550	1550					0.11016692005114237
ALLVSPVIII	10	Unmodified	_ALLVSPVIII_					0	0	0		tr|A0A7D6VQQ1|A0A7D6VQQ1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15880PE=4SV=1	tr|A0A7D6VQQ1|A0A7D6VQQ1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15880PE=4SV=1	tr|A0A7D6VQQ1|A0A7D6VQQ1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15880PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3541747927666	2	519.352086	1036.68962	2.9511	0.0015327	0.6443	0.00033462	3.5954	0.0018673	519.3524444025021	73.724	1.0509	75.52	75.224	76.275	1.7962					85	33	5	0	0	0	0.11481	1	30851	30851		61.357	1.2836	1	63357000			1136	16805	546	551	1551	1551					0.1727412459038078
ALLWGPRIG	9	Unmodified	_ALLWGPRIG_					0	0	0		ENST00000255977.6_2_7:140153916-140154039:-|nuORF	ENST00000255977.6_2_7:140153916-140154039:-|nuORF	ENST00000255977.6_2_7:140153916-140154039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1990234255791	3	328.199272	981.575986	0.27476	9.0178E-05	0.81979	0.00026905	1.0946	0.00035923	328.19947765507453	31.086	0.35972	32.91	32.744	33.103	1.8246					49	11	5	0	0	0	0.70108	1	12980	12980		4.5289	1.5336	1	78445000			1137	5596	547	552	1552	1552					0.08446074267988024
ALLWMWWRRNR	11	Unmodified	_ALLWMWWRRNR_					0	0	0		nc|ENSG00000158220|A0FGR9-2|ESYT3;ENST00000486831.5_1_3:138153640-138188991:+|nuORF;ENSG00000158220|ENST00000389567|ESYT3	nc|ENSG00000158220|A0FGR9-2|ESYT3	nc|ENSG00000158220|A0FGR9-2|ESYT3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1588.101611316204	1	1587.84777	1586.84049	2.0172	0.003203	3.175	0.0050414	5.1922	0.0082444	1587.8559214596985	55.324	0.11887	55.324	55.243	55.362	0					8	4	2	0	0	0	0.14606	1	23035	23035		1.4819	1.1749	1	2239400			1138	3494	548	553	1553	1553					0.07054380750059863
ALLYRSRRRY	10	Unmodified	_ALLYRSRRRY_					0	0	0		ENST00000491215.1_1_6:32163881-32163974:-|nuORF	ENST00000491215.1_1_6:32163881-32163974:-|nuORF	ENST00000491215.1_1_6:32163881-32163974:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9350463747978	3	451.933588	1352.77894	3.1235	0.0014116	-1.3979	-0.00063178	1.7255	0.00077982	451.9330334707084	85.264	1.3791	85.516	84.814	86.193	0.25227					106	43	3	0	0	0	0.89646	1	35414	35414		0.77653	0.27058	1	3258700			1139	6909	549	554	1554	1554					0.11665772322453449
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7467224001884	2	506.745739	1011.47692	1.7628	0.00089328	0.32909	0.00016676	2.0919	0.00106	506.7457341782947	70.195	0.27899	70.195	70.024	70.303	0					14	8	2	0	0	0	0.3154	1	29213	29213		24.674	13.85	1	790000			1140	3062	550	555	1555	1555					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1012.486193835735	1	1012.4842	1011.47692	1.5839	0.0016037	-0.052788	-5.3447E-05	1.5311	0.0015503	1012.4851191447211	70.184	0.31007	70.184	69.993	70.303	0					15	9	2	0	0	0	0.3154	1	29227	29227		24.674	8.8267	1	728450			1141	3062	550	555	1556	1556					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1012.488513171673	1	1012.4842	1011.47692	1.6119	0.001632	0.74982	0.00075919	2.3617	0.0023912	1012.486119876108	69.736	0.28177	70.058	69.878	70.16	0.32224					15	8	2	0	0	0	0.3154	2	29144	29144;29221		24.674	16.764	1	852500			1142	3062	550	555	1557;1558	1557					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7481262087822	2	506.745739	1011.47692	1.6316	0.00082683	0.47953	0.000243	2.1112	0.0010698	506.7462964085206	69.728	0.3132	70.05	69.847	70.16	0.32224					19	9	3	0	0	0	0.15478	1	29180	29180		38.151	26.511	1	1105500			1143	3062	550	555	1559	1559					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7469055056572	2	506.745739	1011.47692	2.4923	0.0012629	-0.4811	-0.00024379	2.0112	0.0010191	506.7458651041777	68.585	0.46035	69.951	69.694	70.154	1.3657					43	14	4	0	0	0	0.10722	2	28786	28739;28786		46.921	31.074	1	5118600			1144	3062	550	555	1560;1561	1561					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.485644519329	1	1012.4842	1011.47692	1.8035	0.001826	-1.659	-0.0016797	0.1445	0.0001463	1012.4824891684453	68.585	0.39674	69.951	69.725	70.122	1.3657					31	12	3	0	0	0	0.078975	2	28751	28751;28801		56.541	35.67	1	4052200			1145	3062	550	555	1562;1563	1562					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.484667956829	1	1012.4842	1011.47692	2.3307	0.0023598	-2.7499	-0.0027842	-0.41917	-0.00042441	1012.4823035778444	68.02	0.36903	69.89	69.704	70.073	1.87					33	11	4	0	0	0	0.10722	3	28538	28490;28538;28594		46.921	24.643	1	3661000			1146	3062	550	555	1564;1565;1566	1565					-0.028354528034356008
ALMADMVYV	9	Unmodified	_ALMADMVYV_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7472717165947	2	506.745739	1011.47692	2.3613	0.0011966	-0.45554	-0.00023084	1.9058	0.00096574	506.74583673206445	68.027	0.43115	69.897	69.674	70.105	1.87					39	13	4	0	0	0	0.078975	2	28563	28512;28563		56.541	29.658	1	6864500			1147	3062	550	555	1567;1568	1568					-0.028354528034356008
ALMDEINFM	9	Unmodified	_ALMDEINFM_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647	CON__Q922U2	CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.2471801638603	2	542.246103	1082.47765	1.5808	0.00085716	1.3701	0.00074293	2.9509	0.0016001	542.2470954193492	78.246	0.2822	78.246	78.095	78.377	0					13	8	2	0	0	0	0.54523	1	32581	32581		13.508	7.1538	1	494730		+	1148	363	551	556	1569	1569					-0.060286581543778084
ALMDEINFM	9	Unmodified	_ALMDEINFM_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647	CON__Q922U2	CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.2467529177666	2	542.246103	1082.47765	1.8909	0.0010253	-0.53878	-0.00029215	1.3521	0.00073318	542.2460092015735	77.902	0.31751	78.212	78.038	78.355	0.30933					16	9	3	0	0	0	0.54523	1	32583	32583		13.508	7.1538	1	704630		+	1149	363	551	556	1570	1570					-0.060286581543778084
ALMDEINFM	9	Unmodified	_ALMDEINFM_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647	CON__Q922U2	CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2461425662041	2	542.246103	1082.47765	2.5747	0.0013961	-1.8476	-0.0010019	0.72714	0.00039429	542.2443141958952	77.005	0.28594	78.286	78.124	78.41	1.2809					14	8	2	0	0	0	0.54523	1	32354	32354		13.508	4.9146	1	863210		+	1150	363	551	556	1571	1571					-0.060286581543778084
ALMDEINFM	9	Unmodified	_ALMDEINFM_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647	CON__Q922U2	CON__Q922U2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	542.246103	1082.47765	2.5542	0.001385	-0.93807	-0.00050867	1.6162	0.00087636	542.2450408228929	76.561	0.29171	78.328	78.127	78.419	1.7672	0.060317	-0.00089854	NaN	13.508	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	702410		+	1151	363	551	556							-0.060286581543778084
ALMDLLLRL	9	Unmodified	_ALMDLLLRL_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3268310427666	2	529.325545	1056.63654	1.9978	0.0010575	0.68172	0.00036085	2.6795	0.0014183	529.3261590806138	93.343	0.41427	93.343	93.138	93.552	0					32	12	3	0	0	0	0.04812	3	39017	38972;39017;39057		69.105	0	1	2794800			1152	1256	552	557	1572;1573;1574	1573					0.11048423536067276
ALMDLLLRL	9	Unmodified	_ALMDLLLRL_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3276244997978	2	529.325545	1056.63654	2.804	0.0014842	0.036287	1.9207E-05	2.8403	0.0015034	529.3257497630074	92.844	0.38457	93.012	92.806	93.19	0.16835					34	11	4	0	0	0	0.057024	3	38881	38838;38881;38922		65.235	0	1	2973100			1153	1256	552	557	1575;1576;1577	1576					0.11048423536067276
ALMDLLLRL	9	Unmodified	_ALMDLLLRL_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3278686404228	2	529.325545	1056.63654	4.1643	0.0022043	-0.29211	-0.00015462	3.8722	0.0020497	529.3256336451312	91.941	0.56301	92.877	92.648	93.211	0.93623					53	17	4	0	0	0	0.0069529	3	38727	38677;38727;38765		114.65	0	1	12080000			1154	1256	552	557	1578;1579;1580	1579					0.11048423536067276
ALMDLLLRL	9	Unmodified	_ALMDLLLRL_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.3284179568291	2	529.325545	1056.63654	3.4552	0.0018289	-0.27675	-0.00014649	3.1784	0.0016824	529.325627976771	91.474	0.65468	92.815	92.573	93.228	1.3415					53	20	4	0	0	0	0.0080158	3	38556	38464;38514;38556		110.67	0	1	11525000			1155	1256	552	557	1581;1582;1583	1583					0.11048423536067276
ALMEDAEIRL	10	Unmodified	_ALMEDAEIRL_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.8040649294853	2	580.802631	1159.59071	1.6899	0.00098149	0.57964	0.00033666	2.2695	0.0013181	580.8029519883727	53.252	0.25209	53.575	53.442	53.694	0.32283					12	7	2	0	0	0	0.85604	1	22304	22304		6.2058	1.8765	1	521080			1156	1054	553	558	1584	1584					0.017297335631610622
ALMEDAEIRL	10	Unmodified	_ALMEDAEIRL_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	580.802631	1159.59071	1.9174	0.0011136	1.2584	0.00073086	3.1758	0.0018445	580.8030074253644	53.862	0.25303	53.862	53.745	53.998	0	0.1436	0.00060726	NaN	6.2058	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	356370			1157	1054	553	558							0.017297335631610622
ALMEEILKL	9	Unmodified	_ALMEEILKL_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000185963|Q8TD16|BICD2;ENSG00000185963|ENST00000356884|BICD2;BICD2-IPPK|1|fusion	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.3090087771416	2	530.309561	1058.60457	1.9191	0.0010177	-1.1626	-0.00061653	0.75647	0.00040117	530.8103591462112	75.295	0.38022	75.295	75.091	75.471	0					27	11	3	0	0	0	0.25667	1	31333	31333		27.629	12.791	1	892890			1158	3300	554	559	1585	1585					0.07761011062257239
ALMEEILKL	9	Unmodified	_ALMEEILKL_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000185963|Q8TD16|BICD2;ENSG00000185963|ENST00000356884|BICD2;BICD2-IPPK|1|fusion	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.3101684451103	2	530.309561	1058.60457	2.7537	0.0014603	-0.35195	-0.00018664	2.4018	0.0012737	530.309177292793	74.68	0.43491	75.005	74.77	75.205	0.32464					21	13	2	0	0	0	0.15456	1	31244	31244		38.176	18.919	1	1425700			1159	3300	554	559	1586	1586					0.07761011062257239
ALMEEILKL	9	Unmodified	_ALMEEILKL_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000185963|Q8TD16|BICD2;ENSG00000185963|ENST00000356884|BICD2;BICD2-IPPK|1|fusion	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3109008669853	2	530.309561	1058.60457	3.5338	0.001874	-1.4028	-0.00074391	2.131	0.0011301	530.3089860967193	73.642	0.53308	74.96	74.654	75.187	1.318					33	16	3	0	0	0	0.026734	2	30904	30858;30904		92.653	28.417	1	3694000			1160	3300	554	559	1587;1588	1588					0.07761011062257239
ALMEEILKL	9	Unmodified	_ALMEEILKL_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1;nc|ENSG00000185963|Q8TD16|BICD2;ENSG00000185963|ENST00000356884|BICD2;BICD2-IPPK|1|fusion	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3109619021416	2	530.309561	1058.60457	2.8184	0.0014946	-1.0907	-0.00057842	1.7277	0.00091621	530.3092384968536	73.098	0.47831	74.908	74.574	75.053	1.8101					34	14	3	0	0	0	0.04812	2	30687	30634;30687		69.105	27.149	1	3280700			1161	3300	554	559	1589;1590	1590					0.07761011062257239
ALMIVERRLE	10	Unmodified	_ALMIVERRLE_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.5742065310478	3	410.572669	1228.69618	2.8485	0.0011695	-0.22198	-9.1139E-05	2.6265	0.0010784	410.57247944617757	92.322	0.36762	92.49	92.314	92.681	0.16835					28	11	3	0	0	0	0.89588	1	38695	38695		1.9064	0	1	1081300	+		1162	8740	555	560	1591	1591					0.09097694479464735
ALMIVERRLE	10	Unmodified	_ALMIVERRLE_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	410.572669	1228.69618	0.78796	0.00032351	1.6862	0.00069232	2.4742	0.0010158	410.5733811682209	92.509	0.3934	92.509	92.228	92.621	0	-0.068183	0.0010395	NaN	1.9064	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2102300	+		1163	8740	555	560							0.09097694479464735
ALMIVERRLE	10	Unmodified	_ALMIVERRLE_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	410.572669	1228.69618	2.8485	0.0011695	-0.22198	-9.1139E-05	2.6265	0.0010784	410.57247944617757	92.322	0.36762	92.49	92.314	92.681	0.16835	-0.08732	-0.0013108	NaN	1.9064	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1081300	+		1164	8740	555	560							0.09097694479464735
ALMIVERRLE	10	Unmodified	_ALMIVERRLE_					0	0	0			REV__ENSG00000072657|ENST00000261180|TRHDE	REV__ENSG00000072657|ENST00000261180|TRHDE	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	410.572669	1228.69618	3.2771	0.0013455	0.81777	0.00033576	4.0949	0.0016813	410.57311219355813	91.367	0.26943	92.733	92.535	92.805	1.366	0.1555	-3.0165E-05	NaN	1.9064	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1230000	+		1165	8740	555	560							0.09097694479464735
ALMPVLNQV	9	Unmodified	_ALMPVLNQV_					0	0	0		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7817260622978	2	492.78097	983.547388	1.4411	0.00071016	0.019375	9.5475E-06	1.4605	0.00071971	492.7811477693023	66.785	0.54234	66.785	66.448	66.99	0					40	16	4	0	0	0	0.0052927	3	27830	27788;27830;27871		120.86	73.936	1	4935000			1166	5281	556	561	1592;1593;1594	1593					0.05495588576548016
ALMPVLNQV	9	Unmodified	_ALMPVLNQV_					0	0	0		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7822753787041	2	492.78097	983.547388	2.6062	0.0012843	-0.57549	-0.00028359	2.0307	0.0010007	492.78089012618756	66.344	0.50773	66.669	66.368	66.876	0.32449					37	15	3	0	0	0	0.0068741	3	27790	27740;27790;27833		114.94	74.495	1	4614700			1167	5281	556	561	1595;1596;1597	1596					0.05495588576548016
ALMPVLNQV	9	Unmodified	_ALMPVLNQV_					0	0	0		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7829162478447	2	492.78097	983.547388	3.0707	0.0015132	0.33929	0.00016719	3.41	0.0016804	492.7811106501089	65.125	0.53273	66.524	66.224	66.757	1.3989					48	16	4	0	0	0	0.0052927	3	27300	27263;27300;27339		120.86	64.316	1	17459000			1168	5281	556	561	1598;1599;1600	1599					0.05495588576548016
ALMPVLNQV	9	Unmodified	_ALMPVLNQV_					0	0	0		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7820922732353	2	492.78097	983.547388	2.0849	0.0010274	0.58488	0.00028822	2.6698	0.0013156	492.7812060992752	64.704	0.601	66.632	66.202	66.803	1.928					50	18	4	0	0	0	0.0052927	3	27155	27080;27117;27155		120.86	50.141	1	13663000			1169	5281	556	561	1601;1602;1603	1603					0.05495588576548016
ALMPVLNQV	9	Oxidation (M)	_ALM(Oxidation (M))PVLNQV_		ALM(1)PVLNQV		ALM(50)PVLNQV	0	0	1		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7790099978447	2	500.778428	999.542302	2.5881	0.0012961	-0.51539	-0.0002581	2.0727	0.001038	500.77822657836896	45.066	0.28869	46.431	46.242	46.53	1.3653					17	8	3	0	0	0	0.098957	1	18878	18878		49.669	13.625	1	1367100			1170	5281	556	562	1604	1604		96			0.04251284713939185
ALMPVLNQV	9	Oxidation (M)	_ALM(Oxidation (M))PVLNQV_		ALM(1)PVLNQV		ALM(40)PVLNQV	0	0	1		ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	ENSG00000223496|ENST00000435634|EXOSC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7787353396416	2	500.778428	999.542302	2.3369	0.0011703	-1.2196	-0.00061077	1.1173	0.00055952	500.77827729390447	45.311	0.2921	46.677	46.53	46.822	1.3653					13	8	2	0	0	0	0.13437	1	18994	18994		40.449	22.314	1	1024900			1171	5281	556	562	1605	1605		96			0.04251284713939185
ALNDAIYLL	9	Unmodified	_ALNDAIYLL_					0	0	0			REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1005.563830554485	1	1005.56152	1004.55425	1.8244	0.0018345	0.80877	0.00081327	2.6331	0.0026478	1005.562624452241	74.401	0.3844	74.401	74.173	74.557	0					27	11	3	0	0	0	0.023786	2	30989	30938;30989		96.285	21.862	1	2585500	+		1172	10724	557	563	1606;1607	1607					0.0521522472874949
ALNDAIYLL	9	Unmodified	_ALNDAIYLL_					0	0	0			REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1005.564135730267	1	1005.56152	1004.55425	2.6684	0.0026832	-0.32927	-0.00033111	2.3391	0.0023521	1005.5614058746072	73.851	0.38379	74.176	74.008	74.391	0.32494					28	11	3	0	0	0	0.045797	2	30878	30878;30928		71.134	14.294	1	2291100	+		1173	10724	557	563	1608;1609	1608					0.0521522472874949
ALNDAIYLL	9	Unmodified	_ALNDAIYLL_					0	0	0			REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	REV__ENST00000514335.1_1_5:37051847-37064632:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1005.564440906048	1	1005.56152	1004.55425	3.5896	0.0036096	0.15765	0.00015853	3.7473	0.0037681	1005.5616958272892	72.754	0.46702	74.084	73.883	74.35	1.3297					32	14	3	0	0	0	0.091139	1	30495	30495		52.268	14.117	1	7131800	+		1174	10724	557	563	1610	1610					0.0521522472874949
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.7701293826103	2	524.769114	1047.52368	1.8361	0.00096355	0.28811	0.00015119	2.1242	0.0011147	524.7693260502002	71.585	0.34901	71.585	71.415	71.764	0					26	10	3	0	0	0	0.11077	2	29830	29784;29830		58.679	22.552	1	2692100		+	1175	345	558	564	1611;1612	1612					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.7697631716728	2	524.769114	1047.52368	1.6931	0.00088849	0.59471	0.00031208	2.2878	0.0012006	524.7693427898646	71.112	0.38272	71.435	71.207	71.59	0.32359					29	11	3	0	0	0	0.15066	2	29784	29736;29784		49.933	20.851	1	3511700		+	1176	345	558	564	1613;1614	1614					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1048.535693347454	1	1048.53095	1047.52368	2.063	0.0021631	4.0878	0.0042862	6.1508	0.0064493	1048.5340011155954	71.123	0.22208	71.447	71.305	71.527	0.32359					12	6	2	0	0	0	0.15066	1	29765	29765		49.933	13.806	1	860150		+	1177	345	558	564	1615	1615					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7705566287041	2	524.769114	1047.52368	2.8619	0.0015018	0.26934	0.00014134	3.1313	0.0016432	524.7693513376599	70.068	0.6597	71.422	71.052	71.712	1.3536					52	19	4	0	0	0	0.028318	3	29393	29345;29393;29432		111.29	29.397	1	11130000		+	1178	345	558	564	1616;1617;1618	1617					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1048.540942370892	1	1048.53095	1047.52368	2.7895	0.0029249	4.0384	0.0042344	6.8279	0.0071592	1048.5372880786233	70.027	0.34069	71.38	71.212	71.552	1.3536					20	10	3	0	0	0	0.17733	1	29440	29440		45.7	18.816	1	3564400		+	1179	345	558	564	1619	1619					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.7702514529228	2	524.769114	1047.52368	2.4043	0.0012617	0.65055	0.00034139	3.0548	0.0016031	524.7696356619207	69.574	0.62991	71.427	71.009	71.639	1.853					50	19	4	0	0	0	0.019071	3	29186	29138;29186;29229		123.45	30.959	1	11169000		+	1180	345	558	564	1620;1621;1622	1621					0.001814463437312952
ALNDEINFL	9	Unmodified	_ALNDEINFL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;ENST00000548088.1_1_12:52632481-52635423:+|nuORF	CON__P08729	CON__P08729	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1048.53095	1047.52368	1.706	0.0017888	-2.1286	-0.0022319	-0.42254	-0.00044305	1049.5272424466875	71.557	0.22197	71.557	71.446	71.668	0	0.10121	-0.0059335	NaN	49.933	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	767510		+	1181	345	558	564							0.001814463437312952
ALNEEAGRLLL	11	Unmodified	_ALNEEAGRLLL_					0	0	0		ENSG00000108106|ENST00000264552|UBE2S	ENSG00000108106|ENST00000264552|UBE2S	ENSG00000108106|ENST00000264552|UBE2S	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	600.2909423708916	2	599.843145	1197.67174	2.2261	0.0013353	-1.2622	-0.00075712	0.96392	0.0005782	600.3421670987972	49.621	0.18559	51.012	50.918	51.103	1.3911					9	5	2	0	0	0	0.14403	1	20751	20751		10.151	3.4274	1	330010			1182	1622	559	565	1623	1623					0.08080757597576849
ALNEINQFYQK	11	Unmodified	_ALNEINQFYQK_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	684.8552123904228	2	684.351334	1366.68811	1.8588	0.0012721	1.3398	0.00091688	3.1986	0.002189	684.3527370012956	38.878	0.22836	38.878	38.82	39.048	0					11	7	2	0	0	0	0.10312	1	16334	16334		55.235	38.122	1	749750		+	1183	336	560	566	1624	1624					0.01943838763668282
ALNEKLVNL	9	Unmodified	_ALNEKLVNL_					0	0	0		ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3043090701103	2	507.303124	1012.5917	1.9796	0.0010043	0.36719	0.00018628	2.3468	0.0011905	507.3032225769791	42.094	0.33918	42.094	41.918	42.257	0					30	10	4	0	0	0	0.0011269	2	17629	17582;17629		133.05	36.686	1	5605500			1184	4373	561	567	1625;1626	1626					0.08590315994376851
ALNEKLVNL	9	Unmodified	_ALNEKLVNL_					0	0	0		ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3033325076103	2	507.303124	1012.5917	2.0417	0.0010358	-0.49709	-0.00025218	1.5447	0.00078361	507.30258464913345	41.629	0.33735	41.946	41.762	42.099	0.31683					27	10	3	0	0	0	0.00030345	2	17516	17478;17516		137.42	51.092	1	5561000			1185	4373	561	567	1627;1628	1628					0.08590315994376851
ALNEKLVNL	9	Unmodified	_ALNEKLVNL_					0	0	0		ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3043395876884	2	507.303124	1012.5917	2.6403	0.0013394	-0.28129	-0.0001427	2.359	0.0011967	507.30306788096567	40.003	0.3968	41.314	41.086	41.483	1.3102					40	12	4	0	0	0	0.00013275	3	16733	16733;16781;16819		145.13	58.798	1	20854000			1186	4373	561	567	1629;1630;1631	1629					0.08590315994376851
ALNEKLVNL	9	Unmodified	_ALNEKLVNL_					0	0	0		ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	ENSG00000175390|ENST00000651655|EIF3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3041259646416	2	507.303124	1012.5917	1.7414	0.00088341	0.021453	1.0883E-05	1.7628	0.00089429	507.30314281760974	39.544	0.39814	41.406	41.186	41.584	1.8624					42	12	4	0	0	0	2.1949E-05	3	16572	16523;16572;16612		171.09	64.146	1	15950000			1187	4373	561	567	1632;1633;1634	1633					0.08590315994376851
ALNELLQHV	9	Unmodified	_ALNELLQHV_					0	0	0		ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.D1277Afs*54|1|0.12|ENSG00000137076|chr9:35711644-35711645|-/G|frameshift_variant	ENSG00000137076|ENST00000314888|TLN1	ENSG00000137076|ENST00000314888|TLN1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1400024294853	2	518.792924	1035.57129	2.2069	0.0011449	-0.32487	-0.00016854	1.882	0.00097639	518.7930279946753	52.015	0.43567	52.015	51.756	52.192	0					31	13	3	0	0	0	0.10591	1	21641	21641		18.135	7.3111	1	3117400			1188	2757	562	568	1635	1635					0.05493145334571636
ALNELLQHV	9	Unmodified	_ALNELLQHV_					0	0	0		ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.D1277Afs*54|1|0.12|ENSG00000137076|chr9:35711644-35711645|-/G|frameshift_variant	ENSG00000137076|ENST00000314888|TLN1	ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.7938720583916	2	518.792924	1035.57129	2.9108	0.0015101	-0.81809	-0.00042442	2.0927	0.0010857	518.7926639666738	50.206	0.41074	51.597	51.387	51.798	1.3911					34	12	4	0	0	0	0.007852	1	21004	21004		111.29	55.11	1	10672000			1189	2757	562	568	1636	1636					0.05493145334571636
ALNELLQHV	9	Unmodified	_ALNELLQHV_					0	0	0		ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.D1277Afs*54|1|0.12|ENSG00000137076|chr9:35711644-35711645|-/G|frameshift_variant	ENSG00000137076|ENST00000314888|TLN1	ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.7935058474541	2	518.792924	1035.57129	1.7819	0.00092443	-0.38552	-0.0002	1.3964	0.00072442	518.7928996352089	49.634	0.47076	51.611	51.412	51.883	1.9772					40	14	4	0	0	0	0.019432	1	20784	20784		99.799	43.622	1	7444600			1190	2757	562	568	1637	1637					0.05493145334571636
ALNEPPQLL	9	Unmodified	_ALNEPPQLL_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7844421267509	2	497.782025	993.549496	2.8352	0.0014113	1.9451	0.00096823	4.7803	0.0023795	497.7830979520657	60.377	0.27438	61.796	61.597	61.871	1.4196					15	8	2	0	0	0	0.46905	1	25332	25332		16.942	3.4344	1	1747000	+		1191	9980	563	569	1638	1638					0.052463405860066814
ALNEPPQLL	9	Unmodified	_ALNEPPQLL_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7840759158134	2	497.782025	993.549496	2.8791	0.0014332	1.8313	0.0009116	4.7104	0.0023448	497.78306468709945	59.861	0.24754	61.83	61.671	61.918	1.969					18	7	3	0	0	0	0.44535	1	25099	25099		18.135	3.2967	1	1039700	+		1192	9980	563	569	1639	1639					0.052463405860066814
ALNEPPQLL	9	Unmodified	_ALNEPPQLL_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.782025	993.549496	2.8352	0.0014113	1.9451	0.00096823	4.7803	0.0023795	497.7830979520657	60.377	0.27438	61.796	61.597	61.871	1.4196	-0.016644	5.8257E-05	NaN	18.135	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1747000	+		1193	9980	563	569							0.052463405860066814
ALNEPPQLL	9	Unmodified	_ALNEPPQLL_					0	0	0			REV__ENSG00000136274|ENST00000490531|NACAD	REV__ENSG00000136274|ENST00000490531|NACAD	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.782025	993.549496	2.8791	0.0014332	1.8313	0.0009116	4.7104	0.0023448	497.78306468709945	59.861	0.24754	61.83	61.671	61.918	1.969	0.016644	-5.4997E-05	NaN	18.135	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1039700	+		1194	9980	563	569							0.052463405860066814
ALNNLLHSL	9	Unmodified	_ALNNLLHSL_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;ENST00000522480.5_1_16:21475086-21478634:-|nuORF;ENST00000566127.1_1_16:29556504-29560080:-|nuORF;ENST00000529428.5_1_16:30296511-30300103:-|nuORF;ENST00000532337.1_1_16:29451232-29458344:-|nuORF;ENST00000523028.5_1_16:21892164-21910369:-|nuORF;ENST00000309865.11_1_16:22482951-22501641:+|nuORF;SMG1|p.R903Qfs*25|1|0.15|ENSG00000157106|chr16:18869228-18869229|GC/-|frameshift_variant;SMG1|p.K1189Nfs*16|1|0.21|ENSG00000157106|chr16:18863756-18863778|TTGAGATGTAGCACTCACATGCT/-|frameshift_variant	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7880737185478	2	497.787641	993.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.416	1	56.384	55.884	56.884	1.9684								0	0	0	0.30487	1	22795	22795		18.135	8.0611	1				1195	3464	564	570	1640	1640					0.0636916268015284
ALNYYNEAL	9	Unmodified	_ALNYYNEAL_					0	0	0		tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7630493044853	2	535.761289	1069.50803	2.9187	0.0015637	-1.5873	-0.00085043	1.3314	0.0007133	535.7602880216399	70.036	0.30943	71.39	71.243	71.552	1.3536					16	9	2	0	0	0	0.21592	1	29374	29374		31.268	5.0002	1	1715000			1196	17233	565	571	1641	1641					-0.023948401733377978
ALNYYNEAL	9	Unmodified	_ALNYYNEAL_					0	0	0		tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	tr|A0A7D7A182|A0A7D7A182_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7599365115166	2	535.761289	1069.50803	2.6016	0.0013939	-2.8982	-0.0015527	-0.29656	-0.00015889	535.7592498858224	69.582	0.28325	71.435	71.262	71.546	1.853					16	8	2	0	0	0	0.25667	1	29180	29180		27.629	3.4188	1	1994200			1197	17233	565	571	1642	1642					-0.023948401733377978
ALPALLLRRL	10	Unmodified	_ALPALLLRRL_					0	0	0		ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.3877441287041	2	568.387326	1134.7601	2.6366	0.0014986	-0.82858	-0.00047096	1.8081	0.0010277	568.3862313388792	109.31	0.32567	109.36	109.15	109.48	0.048843					23	13	2	0	0	0	0.89803	1	47107	47107		0.45834	0	1	4555100			1198	2467	566	572	1643	1643					0.19810842698711895
ALPALLLRRL	10	Unmodified	_ALPALLLRRL_					0	0	0		ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	568.387326	1134.7601	0.93271	0.00053014	-0.047119	-2.6782E-05	0.88559	0.00050336	568.386892068951	109.26	0.34937	109.26	109.13	109.48	0	-0.090517	0.00069355	NaN	0.45834	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7621800			1199	2467	566	572							0.19810842698711895
ALPALLLRRL	10	Unmodified	_ALPALLLRRL_					0	0	0		ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	568.387326	1134.7601	3.2076	0.0018231	-0.86434	-0.00049128	2.3432	0.0013319	568.3865941065549	109.27	0.36099	109.43	109.27	109.63	0.15898	0.074403	-0.00023544	NaN	0.45834	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7705900			1200	2467	566	572							0.19810842698711895
ALPALLLRRL	10	Unmodified	_ALPALLLRRL_					0	0	0		ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	ENSG00000130829|ENST00000342782|DUSP9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	568.387326	1134.7601	3.2622	0.0018542	-0.875	-0.00049734	2.3872	0.0013569	568.3869444050619	109.21	0.29214	109.36	109.26	109.55	0.1548	0.010809	-0.00024756	NaN	0.45834	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4239100			1201	2467	566	572							0.19810842698711895
ALPDECDSQV	10	Unmodified	_ALPDECDSQV_					0	0	0		ENST00000307768.4_1_3:9932249-9934613:+|nuORF	ENST00000307768.4_1_3:9932249-9934613:+|nuORF	ENST00000307768.4_1_3:9932249-9934613:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	538.3303710818291	2	538.731871	1075.44919	2.807	0.0015122	-3.3998	-0.0018316	-0.5928	-0.00031936	538.729421275046	73.382	0.21526	75.179	75.132	75.347	1.7962					10	6	2	0	0	0	0.12484	1	30770	30770		1.6526	0	1	1407900			1202	5784	567	573	1644	1644					-0.08551684529993508
ALPDQSFLW	9	Unmodified	_ALPDQSFLW_					0	0	0		nc|ENSG00000249915|O75340-2|PDCD6;ENSG00000249915|ENST00000264933|PDCD6;ENST00000507841.5_1_5:1632852-1634017:-|nuORF;nc|ENSG00000249915|O75340-3|PDCD6;ENST00000507505.5_1_5:1599907-1634017:-|nuORF;ENST00000507290.5_1_5:1632852-1634017:-|nuORF;ENST00000515587.1_1_5:271739-272994:+|nuORF	nc|ENSG00000249915|O75340-2|PDCD6	nc|ENSG00000249915|O75340-2|PDCD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7709838747978	2	538.7742	1075.53385	2.8579	0.0015398	-1.9631	-0.0010577	0.89481	0.0004821	538.7712597194512	75.754	0.44653	77.521	77.273	77.72	1.7672					19	14	2	0	0	0	0.10473	2	31723	31723;31785		47.749	6.2558	1	8949000			1203	5377	568	574	1645;1646	1645					-0.0008994593106308457
ALPEAPAPLLP	11	Unmodified	_ALPEAPAPLLP_					0	0	0		ENST00000485631.1_1_22:18189492-18210297:+|nuORF;nc|ENSG00000099968|Q9BXK5-4|BCL2L13;ENSG00000099968|ENST00000317582|BCL2L13	ENST00000485631.1_1_22:18189492-18210297:+|nuORF	ENST00000485631.1_1_22:18189492-18210297:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8196288943291	2	544.82115	1087.62775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.317	1	70.683	70.183	71.183	1.3657								0	0	0	0.43387	1	29091	29091		29.082	3.6823	1				1204	1224	569	575	1647	1647					0.08743773171227076
ALPEDLVEV	9	Unmodified	_ALPEDLVEV_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3;nc|ENSG00000136167|P13796-2|LCP1;ENSG00000136167|ENST00000323076|LCP1	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7670471072197	2	492.76604	983.517527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.756	1	63.756	63.256	64.256	0								0	0	0	0.40188	1	26579	26579		8.5933	1.304	1				1205	1374	570	576	1648	1648					0.025109281121899585
ALPEDLVEV	9	Unmodified	_ALPEDLVEV_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3;nc|ENSG00000136167|P13796-2|LCP1;ENSG00000136167|ENST00000323076|LCP1	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7668640017509	2	492.76604	983.517527	2.7488	0.0013545	-0.58855	-0.00029002	2.1603	0.0010645	492.76573375386704	61.727	1.3927	63.684	63.089	64.482	1.9571					95	44	3	0	0	0	0.24063	1	25859	25859		28.487	1.6032	1	2028500			1206	1374	570	576	1649	1649					0.025109281121899585
ALPIRVKWREF	11	Unmodified	_ALPIRVKWREF_					0	0	0			REV__nc|ENSG00000166436|O15016-3|TRIM66	REV__nc|ENSG00000166436|O15016-3|TRIM66	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.6198608279228	3	472.282106	1413.82449	3.1183	0.0014727	-0.53634	-0.0002533	2.582	0.0012194	472.28123472315633	87.177	1.8927	87.177	86.84	88.732	0					108	67	2	0	0	0	1.0388	1	36577	36577		0.50596	0	1	5550500	+		1207	13357	571	577	1650	1650					0.13412997784803338
ALPLFSPPSP	10	Unmodified	_ALPLFSPPSP_					0	0	0			REV__ENSG00000188807|ENST00000340381|TMEM201	REV__ENSG00000188807|ENST00000340381|TMEM201	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2914306521416	2	513.286943	1024.55933	4.6519	0.0023878	2.0681	0.0010615	6.72	0.0034493	513.2877330536328	87.321	0.37054	88.413	88.241	88.612	1.0918					25	11	3	0	0	0	0.77604	1	36808	36808		14.838	2.3067	1	3261800	+		1208	11587	572	578	1651	1651					0.04803528591378381
ALPLFSPPSP	10	Unmodified	_ALPLFSPPSP_					0	0	0			REV__ENSG00000188807|ENST00000340381|TMEM201	REV__ENSG00000188807|ENST00000340381|TMEM201	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	513.286943	1024.55933	4.6519	0.0023878	2.0681	0.0010615	6.72	0.0034493	513.2877330536328	87.321	0.37054	88.413	88.241	88.612	1.0918	-0.013875	0.00042264	NaN	14.838	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3261800	+		1209	11587	572	578							0.04803528591378381
ALPLFSPPSP	10	Unmodified	_ALPLFSPPSP_					0	0	0			REV__ENSG00000188807|ENST00000340381|TMEM201	REV__ENSG00000188807|ENST00000340381|TMEM201	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	513.286943	1024.55933	4.9563	0.002544	1.0857	0.00055726	6.0419	0.0031012	513.2875638942974	86.945	0.33952	88.44	88.21	88.55	1.4953	0.013875	-0.00058593	NaN	14.838	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1358800	+		1210	11587	572	578							0.04803528591378381
ALPPPLLSLL	10	Unmodified	_ALPPPLLSLL_					0	0	0			REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	REV__ENST00000381496.7_1_10:468766-532425:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2279846072197	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.33	1	104.33	103.83	104.83	0								0	0	0	0.66218	1	44006	44006		0.77653	0	1		+		1211	12777	573	579	1652	1652					0.14329551556306797
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	910.5615112185478	1	910.560795	909.553519	1.6371	0.0014907	-0.091083	-8.2936E-05	1.5461	0.0014078	910.560418109199	66.062	0.4181	66.062	65.9	66.318	0					22	12	2	0	0	0	0.15478	2	27564	27514;27564		38.151	7.5574	1	1018600			1212	3422	574	580	1653;1654	1654					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7851135134697	2	455.784036	909.553519	1.7939	0.00081764	0.48829	0.00022255	2.2822	0.0010402	455.78471650035675	66.106	0.41562	66.106	65.87	66.285	0					23	12	2	0	0	0	0.20838	1	27545	27545		32.117	1.8922	1	1893500			1213	3422	574	580	1655	1655					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	455.7856017947197	2	455.784036	909.553519	2.5219	0.0011494	0.14384	6.5559E-05	2.6657	0.001215	455.78433481142514	65.649	0.47264	65.976	65.674	66.147	0.32689					33	14	3	0	0	0	0.11478	2	27496	27446;27496		44.407	8.3628	1	1698300			1214	3422	574	580	1656;1657	1657					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.5621826052666	1	910.560795	909.553519	1.9913	0.0018132	-0.32213	-0.00029331	1.6692	0.0015199	910.5600679375635	65.608	0.4715	65.935	65.707	66.179	0.32688					25	14	2	0	0	0	0.087207	1	27460	27460		53.576	17.531	1	1048600			1215	3422	574	580	1658	1658					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7853576540947	2	455.784036	909.553519	3.3044	0.0015061	-0.2972	-0.00013546	3.0072	0.0013706	455.78387609334254	64.401	0.55077	65.808	65.528	66.079	1.4071					45	17	3	0	0	0	0.03795	3	27048	26956;27004;27048		77.984	17.595	1	3689600			1216	3422	574	580	1659;1660;1661	1661					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	910.5614501833916	1	910.560795	909.553519	2.7639	0.0025167	-0.33222	-0.00030251	2.4317	0.0022142	910.5604109495099	64.41	0.55077	65.817	65.528	66.079	1.4071					40	17	3	0	0	0	0.022807	3	27016	26972;27016;27071		97.075	19.09	1	3686000			1217	3422	574	580	1662;1663;1664	1663					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.7853271365166	2	455.784036	909.553519	3.1324	0.0014277	-0.21467	-9.7841E-05	2.9177	0.0013298	455.783996939694	63.93	0.52602	65.858	65.582	66.108	1.928					42	16	3	0	0	0	0.061246	2	26821	26773;26821		63.563	8.7697	1	5240300			1218	3422	574	580	1665;1666	1666					0.09512430079689693
ALPPVLTTV	9	Unmodified	_ALPPVLTTV_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	910.5624877810478	1	910.560795	909.553519	2.7589	0.0025121	-0.74033	-0.00067412	2.0185	0.001838	910.559894963706	63.914	0.5261	65.842	65.551	66.077	1.928					36	16	3	0	0	0	0.0024698	3	26822	26776;26822;26878		129.2	16.753	1	2745800			1219	3422	574	580	1667;1668;1669	1668					0.09512430079689693
ALPRRPQVPRL	11	Unmodified	_ALPRRPQVPRL_					0	0	0			REV__ENST00000487413.1_1_3:50453473-50541058:-|nuORF	REV__ENST00000487413.1_1_3:50453473-50541058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.9117309451103	2	651.909488	1301.80442	2.8791	0.0018769	-1.0757	-0.00070124	1.8035	0.0011757	651.908720567941	107.33	0.16747	107.49	107.39	107.56	0.15781					26	8	4	0	0	0	1.0362	1	46130	46130		1.3295	0	1	61615000	+		1220	13399	575	581	1670	1670					0.16559246844872177
ALPSKLPTF	9	Unmodified	_ALPSKLPTF_					0	0	0		ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF;TRIM25|p.V396F|1|0.05|ENSG00000121060|chr17:56895599-56895599|C/A|missense_variant	ENSG00000121060|ENST00000316881|TRIM25	ENSG00000121060|ENST00000316881|TRIM25	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2892944216728	2	487.289485	972.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.827	1	50.215	49.715	50.715	1.388								0	0	0	0.15983	1	20440	20440		29.082	5.9332	1				1221	2127	576	582	1671	1671					0.0770383245398989
ALPTVLVGV	9	Unmodified	_ALPTVLVGV_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	868.5488159060478	1	868.550231	867.542954	1.3052	0.0011336	-2.9593	-0.0025703	-1.6541	-0.0014367	868.546767920714	68.789	0.20841	70.642	70.558	70.766	1.853					9	6	2	0	0	0	0.069258	1	28867	28867		60.39	6.814	1	918000			1222	1040	577	583	1672	1672					0.10388447425282266
ALPTVLVGV	9	Unmodified	_ALPTVLVGV_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	868.550231	867.542954	1.9955	0.0017332	-5.5556	-0.0048253	-3.5601	-0.0030922	868.5447702595728	69.378	0.26155	70.743	70.585	70.847	1.3657	0.050687	-0.0014114	NaN	60.39	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1409800			1223	1040	577	583							0.10388447425282266
ALPWRSSVWLC	11	Unmodified	_ALPWRSSVWLC_					0	0	0		ENST00000479650.5_1_9:140469231-140473170:-|nuORF	ENST00000479650.5_1_9:140469231-140473170:-|nuORF	ENST00000479650.5_1_9:140469231-140473170:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.8969909548759	3	439.897264	1316.66996	0.90145	0.00039655	-0.69523	-0.00030583	0.20622	9.0717E-05	439.8970182140176	29.512	0.33288	31.31	31.143	31.476	1.7987					23	10	3	0	0	0	1.0191	1	12364	12364		2.6312	0	1	1852000			1224	6809	578	584	1673	1673					0.024294253079688133
ALQAFSQLFF	10	Unmodified	_ALQAFSQLFF_					0	0	0			REV__ENST00000524669.5_1_11:57416530-57416830:-|nuORF	REV__ENST00000524669.5_1_11:57416530-57416830:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3128539919853	2	586.310949	1170.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.206	1	91.226	90.726	91.726	1.0199								0	0	0	0.66008	1	38009	38009		4.3292	0	1		+		1225	13651	579	585	1674	1674					0.028866025114439253
ALQALVVTL	9	Unmodified	_ALQALVVTL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;ENST00000460829.5_1_3:184046782-184052693:+|nuORF	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	927.5915405154228	1	927.587344	926.580068	3.6246	0.0033621	-2.6368	-0.0024459	0.98779	0.00091626	927.586261115959	74.008	0.31495	75.326	75.154	75.469	1.318					15	9	2	0	0	0	0.051699	1	31052	31052		67.344	20.423	1	1773800			1226	1886	580	586	1675	1675					0.1138411897103424
ALQALVVTL	9	Unmodified	_ALQALVVTL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1;ENST00000460829.5_1_3:184046782-184052693:+|nuORF	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	927.5908080935478	1	927.587344	926.580068	2.8775	0.0026691	-2.0892	-0.0019379	0.78826	0.00073118	927.585460918459	73.505	0.30849	75.302	75.132	75.44	1.7962					17	9	2	0	0	0	0.076627	1	30806	30806		57.471	13.064	1	1409800			1227	1886	580	586	1676	1676					0.1138411897103424
ALQARKPLTAL	11	Unmodified	_ALQARKPLTAL_					0	0	0			REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	591.3746215701103	2	591.371872	1180.72919	1.8183	0.0010753	1.2717	0.00075204	3.09	0.0018273	591.3729753319116	80.513	0.2795	80.804	80.685	80.964	0.29056					21	8	3	0	0	0	0.80586	1	33647	33647		15.248	0.8431	1	943940	+		1228	11531	581	587	1677	1677					0.14605644593802936
ALQDMDKFSL	10	Unmodified	_ALQDMDKFSL_					0	0	0		nc|ENSG00000189184|Q9HCL0-2|PCDH18;ENSG00000189184|ENST00000344876|PCDH18	nc|ENSG00000189184|Q9HCL0-2|PCDH18	nc|ENSG00000189184|Q9HCL0-2|PCDH18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.7891723513603	2	584.289356	1166.56416	2.4503	0.0014317	-0.097081	-5.6723E-05	2.3532	0.001375	584.2896840502616	59.566	0.71149	60.986	60.587	61.298	1.4196					70	22	5	0	0	0	0.65574	1	24877	24877		20.454	0	1	27760000			1229	4899	582	588	1678	1678					-0.012459553281814806
ALQEALWEL	9	Unmodified	_ALQEALWEL_					0	0	0		ENSG00000160233|ENST00000291592|LRRC3	ENSG00000160233|ENST00000291592|LRRC3	ENSG00000160233|ENST00000291592|LRRC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1642333865166	2	536.787307	1071.56006	1.6132	0.00086596	0.33253	0.0001785	1.9458	0.0010445	536.7873281412695	71.197	0.22243	71.52	71.367	71.59	0.32359					9	6	2	0	0	0	0.11645	1	29802	29802		4.756	0	1	515180			1230	3550	583	589	1679	1679					0.027143232404114315
ALQEEKHQLF	10	Unmodified	_ALQEEKHQLF_					0	0	0		ENST00000571695.1_1_17:7217390-7217998:-|nuORF;ENST00000574201.1_1_17:7217587-7218431:-|nuORF;ENST00000571697.5_1_17:7217203-7217998:-|nuORF;ENST00000572363.5_1_17:7217390-7218672:-|nuORF;ENST00000571098.5_1_17:7217203-7218672:-|nuORF;nc|ENSG00000132522|Q13227-2|GPS2;ENSG00000132522|ENST00000380728|GPS2	ENST00000571695.1_1_17:7217390-7217998:-|nuORF	ENST00000571695.1_1_17:7217390-7217998:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8303710818291	2	621.827495	1241.64044	1.8042	0.0011219	0.71517	0.00044471	2.5194	0.0015666	621.8279904595299	48.182	0.30686	50.16	49.959	50.266	1.9772					15	9	2	0	0	0	0.65574	1	20178	20178		20.454	0	1	990550			1231	2538	584	590	1680	1680					0.029281845634614
ALQEKLWNV	9	Unmodified	_ALQEKLWNV_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;ENSG00000149262|ENST00000534064|INTS4;INTS4-CYP2R1|1|fusion;ENST00000533180.1_1_11:77612465-77632469:-|nuORF	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.8124267458916	2	550.808574	1099.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.481	1	45.846	45.346	46.346	1.3653								0	0	0	0.17971	1	18645	18645		27.629	8.1898	1				1232	7658	585	591	1681	1681					0.05677718368656315
ALQGVKYIV	9	Unmodified	_ALQGVKYIV_					0	0	0		tr|A0A7D7A2V5|A0A7D7A2V5_9CLOTGlycerol-3-phosphatedehydrogenase[NAD(P)+]OS=ClostridiumintestinaleOX=36845GN=gpsAPE=3SV=1	tr|A0A7D7A2V5|A0A7D7A2V5_9CLOTGlycerol-3-phosphatedehydrogenase[NAD(P)+]OS=ClostridiumintestinaleOX=36845GN=gpsAPE=3SV=1	tr|A0A7D7A2V5|A0A7D7A2V5_9CLOTGlycerol-3-phosphatedehydrogenase[NAD(P)+]OS=ClostridiumintestinaleOX=36845GN=gpsAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8044006228447	2	495.80276	989.590967	1.5736	0.00078021	1.3002	0.00064465	2.8738	0.0014249	495.8033783479987	45.578	0.15752	45.578	45.499	45.657	0					7	4	2	0	0	0	0.46905	1	19079	19079		16.942	0	1	430750			1233	17265	586	592	1682	1682					0.095755213453117
ALQITVGHI	9	Unmodified	_ALQITVGHI_					0	0	0		nc|ENSG00000182557|Q6ZMD2-2|SPNS3;ENSG00000182557|ENST00000355530|SPNS3	nc|ENSG00000182557|Q6ZMD2-2|SPNS3	nc|ENSG00000182557|Q6ZMD2-2|SPNS3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1997863650322	2	476.284734	950.554916	2.7867	0.0013273	-3.8433	-0.0018305	-1.0566	-0.00050325	476.2821371577304	44.892	0.40982	46.258	46.023	46.433	1.3653					23	12	2	0	0	0	0.11463	1	18852	18852		12.532	3.9383	1	3373900			1234	7942	587	593	1683	1683					0.07766064168481535
ALQKVLKKRK	10	Unmodified	_ALQKVLKKRK_					0	0	0		ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2494994997978	4	303.713217	1210.82376	2.0304	0.00061665	3.392	0.0010302	5.4224	0.0016469	303.96516347626215	96.917	0.31538	97.022	96.755	97.07	0.105					15	9	2	0	0	0	0.12561	1	40502	40502		0.15932	0.01943	1	896070			1235	4180	588	594	1684	1684					0.2267820313577431
ALQKVLKKRK	10	Unmodified	_ALQKVLKKRK_					0	0	0		ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	303.713217	1210.82376	2.5776	0.00078284	3.4622	0.0010515	6.0398	0.0018344	303.71409429896084	96.64	0.14825	96.925	96.806	96.954	0.28442	-0.056069	-0.00013325	NaN	0.15932	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603010			1236	4180	588	594							0.2267820313577431
ALQKVLKKRK	10	Unmodified	_ALQKVLKKRK_					0	0	0		ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	ENSG00000171180|ENST00000641868|OR2M4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	303.713217	1210.82376	2.5765	0.00078252	0.4569	0.00013877	3.0334	0.00092128	303.7142855850916	96.548	0.46867	96.854	96.664	97.133	0.3062	-0.12659	-0.0037843	NaN	0.15932	21	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	713950			1237	4180	588	594							0.2267820313577431
ALQLSIRLPLC	11	Unmodified	_ALQLSIRLPLC_					0	0	0		ENST00000502271.5_1_5:53180101-53180530:-|nuORF	ENST00000502271.5_1_5:53180101-53180530:-|nuORF	ENST00000502271.5_1_5:53180101-53180530:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.5819274783134	3	409.581164	1225.72166	3.8555	0.0015791	-1.2276	-0.00050278	2.6279	0.0010764	409.58047861624766	90.847	0.60861	91.828	91.493	92.102	0.98157					33	18	2	0	0	0	0.99899	1	38289	38289		3.8459	0.25323	1	1360400			1238	6977	589	595	1685	1685					0.11783169001864735
ALQPEPEPV	9	Unmodified	_ALQPEPEPV_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA;SPECC1L-MKL1|1|fusion	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.2610656619072	2	490.258382	978.502212	2.0063	0.0009836	3.4241	0.0016787	5.4304	0.0026623	490.2596469330916	61.208	0.18816	61.208	61.078	61.267	0					8	5	2	0	0	0	0.64949	1	25509	25509		9.3474	0.75416	1	597360			1239	4950	590	596	1686	1686					0.012100613149982564
ALQPWRPLL	9	Unmodified	_ALQPWRPLL_					0	0	0		ENST00000361866.7_1_21:47424611-47424767:+|nuORF	ENST00000361866.7_1_21:47424611-47424767:+|nuORF	ENST00000361866.7_1_21:47424611-47424767:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3288452029228	2	547.329476	1092.6444	3.0475	0.001668	-0.60352	-0.00033033	2.444	0.0013376	547.3294410612287	62.261	0.51504	64.218	63.999	64.514	1.9571					37	16	3	0	0	0	0.22519	1	26228	26228		30.225	3.3412	1	2853000			1240	6042	591	597	1687	1687					0.10178318847852097
ALQSLLHLL	9	Unmodified	_ALQSLLHLL_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.3174621462822	2	504.316035	1006.61752	2.2631	0.0011413	1.0497	0.00052939	3.3129	0.0016707	504.3164968723806	78.082	0.35229	78.391	78.163	78.516	0.30932					18	10	2	0	0	0	0.061246	1	32634	32634		63.563	19.156	1	831320			1241	1847	592	598	1688	1688					0.11447210236678984
ALQSLLHLL	9	Unmodified	_ALQSLLHLL_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3178588747978	2	504.316035	1006.61752	2.7704	0.0013971	1.7446	0.00087985	4.515	0.002277	504.3170026526797	76.984	0.59766	78.265	77.844	78.442	1.2809					39	18	3	0	0	0	0.03795	2	32323	32277;32323		77.984	19.156	1	2811600			1242	1847	592	598	1689;1690	1690					0.11447210236678984
ALQSLLHLL	9	Unmodified	_ALQSLLHLL_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.3183166384697	2	504.316035	1006.61752	2.5873	0.0013048	1.8764	0.00094629	4.4637	0.0022511	504.3169499855783	76.38	0.6043	78.147	77.782	78.386	1.7672					38	18	3	0	0	0	0.033794	2	32027	32027;32075		81.613	19.156	1	3326500			1243	1847	592	598	1691;1692	1691					0.11447210236678984
ALQTPDQSFP	10	Unmodified	_ALQTPDQSFP_					0	0	0			REV__ENST00000557417.5_3_12:56748997-56753873:-|nuORF	REV__ENST00000557417.5_3_12:56748997-56753873:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.8385497927666	2	552.272021	1102.52949	2.8047	0.001549	-4.3391	-0.0023964	-1.5344	-0.00084742	552.2689490619521	74.958	0.18983	76.265	76.214	76.404	1.3063					8	5	2	0	0	0	0.12437	1	31455	31455		8.7454	0	1	1165400	+		1244	10991	593	599	1693	1693					-0.0176745514461345
ALQVKLDIQV	10	Unmodified	_ALQVKLDIQV_					0	0	0		ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2333557009697	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.43	1	64.759	64.259	65.259	0.32899								0	0	0	0.66161	1	26989	26989		1.7423	0.14999	1				1245	6734	594	600	1694	1694					0.11794847091277916
ALQVKLDIQV	10	Unmodified	_ALQVKLDIQV_					0	0	0		ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2337219119072	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.709	1	95.833	95.333	96.333	0.12331								0	0	0	0.66161	1	40054	40054		1.7423	0.67081	1				1246	6734	594	600	1695	1695					0.11794847091277916
ALQVKLDIQV	10	Unmodified	_ALQVKLDIQV_					0	0	0		ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2324706912041	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.53	1	62.495	61.995	62.995	1.9653								0	0	0	0.66161	1	25398	25398		1.7423	0.67081	1				1247	6734	594	600	1696	1696					0.11794847091277916
ALQVKLDIQV	10	Unmodified	_ALQVKLDIQV_					0	0	0		ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	ENST00000470574.1_1_8:41832143-41834721:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2336913943291	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.662	1	84.332	83.832	84.832	1.67								0	0	0	0.66141	1	34677	34677		2.086	0.34373	1				1248	6734	594	600	1697	1697					0.11794847091277916
ALRARPVHSL	10	Unmodified	_ALRARPVHSL_					0	0	0			REV__ENST00000453096.6_1_11:18343889-18344213:+|nuORF	REV__ENST00000453096.6_1_11:18343889-18344213:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3418456912041	2	560.340907	1118.66726	2.0203	0.0011321	0.76588	0.00042915	2.7862	0.0015612	560.3412148168601	88.384	0.55127	88.384	88.15	88.701	0					68	17	5	0	0	0	0.89803	1	37060	37060		1.6526	0.17072	1	53316000	+		1249	13148	595	601	1698	1698					0.11267337965318802
ALREKRTTV	9	Unmodified	_ALREKRTTV_					0	0	0		ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.2465087771416	2	537.324922	1072.63529	3.2461	0.0017442	-1.8904	-0.0010157	1.3557	0.00072848	537.3248105129005	74.832	0.31348	76.139	75.966	76.28	1.3063					17	9	2	0	0	0	0.10339	1	31348	31348		10.074	0	1	858420			1250	1461	596	602	1699	1699					0.10187925491504757
ALRLEWTL	8	Unmodified	_ALRLEWTL_					0	0	0			REV__nc|ENSG00000272395|K9M1U5-4|IFNL4	REV__nc|ENSG00000272395|K9M1U5-4|IFNL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2957336306572	2	501.292559	1000.57057	2.0639	0.0010346	1.4133	0.00070849	3.4772	0.0017431	501.29335744633033	66.335	0.27291	67.724	67.478	67.751	1.3887					13	8	3	0	0	0	0.86202	1	27831	27831		15.768	0	1	1595800	+		1251	14561	597	603	1700	1700					0.07030350685522535
ALRLEWTL	8	Unmodified	_ALRLEWTL_					0	0	0			REV__nc|ENSG00000272395|K9M1U5-4|IFNL4	REV__nc|ENSG00000272395|K9M1U5-4|IFNL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2917358279228	2	501.292559	1000.57057	1.5342	0.00076907	-1.5151	-0.00075952	0.019047	9.548E-06	501.29162519413114	65.452	0.52739	67.36	66.969	67.496	1.9085					29	16	2	0	0	0	0.87106	1	27463	27463		14.582	1.0738	1	1299600	+		1252	14561	597	603	1701	1701					0.07030350685522535
ALRLQGVRQ	9	Unmodified	_ALRLQGVRQ_					0	0	0		ZNF497|p.A114Vfs*213|1|0.53|ENSG00000174586|chr19:58357294-58357295|CG/-|frameshift_variant	ZNF497|p.A114Vfs*213|1|0.53|ENSG00000174586|chr19:58357294-58357295|CG/-|frameshift_variant	ZNF497|p.A114Vfs*213|1|0.53|ENSG00000174586|chr19:58357294-58357295|CG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5482971072197	3	347.548964	1039.62506	0.61578	0.00021402	-2.0184	-0.00070151	-1.4027	-0.00048749	347.54824695628696	42.24	0.75204	43.58	43.201	43.953	1.3399					44	23	3	0	0	0	0.82114	1	17769	17769		2.4985	0.41248	1	3087400			1253	17366	598	604	1702	1702					0.10683362556937936
ALRLVCSYF	9	Unmodified	_ALRLVCSYF_					0	0	0		L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|107|2|anti-sense	L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|107|2|anti-sense	L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|107|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.8362914919853	2	536.28642	1070.55829	3.1957	0.0017138	3.5345	0.0018955	6.7302	0.0036093	536.2883920081732	74.889	0.34478	76.195	75.966	76.311	1.3063					22	10	3	0	0	0	0.10844	1	31364	31364		11.64	1.4569	1	2343100			1254	7779	599	605	1703	1703					0.025829909508274795
ALRNLRLPRS	10	Unmodified	_ALRNLRLPRS_					0	0	0		ENST00000419785.1_1_1:2303243-2316539:-|nuORF	ENST00000419785.1_1_1:2303243-2316539:-|nuORF	ENST00000419785.1_1_1:2303243-2316539:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2509033083916	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.37	1	117.37	116.87	117.87	0								0	0	0	0.6623	1	50604	50604		0.56317	0.10865	1				1255	6439	600	606	1704	1704					0.14134698402403956
ALRNLRYRRGI	11	Unmodified	_ALRNLRYRRGI_					0	0	0		nc|ENSG00000285253|Q6N043-4|ZNF280D;nc|ENSG00000285253|Q6N043-2|ZNF280D;ENSG00000137871|ENST00000267807|ZNF280D	nc|ENSG00000285253|Q6N043-4|ZNF280D	nc|ENSG00000285253|Q6N043-4|ZNF280D	MSMS	GG20161007_CRH_Patient100_W632_01	3	694.4224731326103	2	694.423294	1386.83203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.697	1	85.856	85.356	86.356	1.159								0	0	0	0.63775	1	35539	35539		1.1933	0	1				1256	2797	601	607	1705	1705					0.1540915010509707
ALRRAAEHLP	10	Unmodified	_ALRRAAEHLP_					0	0	0			REV__tr|A0A553SKV3|A0A553SKV3_NIACIStageIIIsporulationproteinSpoABOS=NialliacirculansOX=1397GN=CEQ21_19455PE=4SV=1	REV__tr|A0A553SKV3|A0A553SKV3_NIACIStageIIIsporulationproteinSpoABOS=NialliacirculansOX=1397GN=CEQ21_19455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3311645388603	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.89803	1	30930	30930		1.3295	1.3295	1	6327800	+		1257	14967	602	608	1706	1706					0.08550747585650242
ALRRDFQI	8	Unmodified	_ALRRDFQI_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7930786013603	2	509.793258	1017.57196	2.301	0.001173	-1.1163	-0.00056909	1.1847	0.00060394	509.7927788754013	63.153	0.40925	63.153	62.926	63.335	0					36	12	4	0	0	0	0.87572	2	26267	26267;26365		15.768	0	1	4439800			1258	2529	603	609	1707;1708	1707					0.06387984774266897
ALRRDFQI	8	Unmodified	_ALRRDFQI_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.7954284548759	2	509.793258	1017.57196	2.068	0.0010542	-0.57631	-0.0002938	1.4917	0.00076045	509.7930046688237	62.666	0.436	62.995	62.788	63.224	0.32974					35	13	4	0	0	0	0.87572	1	26208	26208		15.768	0	1	4931100			1259	2529	603	609	1709	1709					0.06387984774266897
ALRRQQLL	8	Unmodified	_ALRRQQLL_					0	0	0		nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;ENSG00000071054|ENST00000324219|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4;ENST00000476609.1_1_2:102441885-102476398:+|nuORF	nc|ENSG00000071054|O95819|MAP4K4	nc|ENSG00000071054|O95819|MAP4K4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	499.3015624880791	2	499.3169	996.619247	3.2259	0.0016108	1.2255	0.0006119	4.4514	0.0022227	499.317288177417	89.927	0.19267	90.136	90.017	90.21	0.20904					8	5	2	0	0	0	2.3239	1	37650	37650		2.8892	0.58649	1	255610			1260	864	604	610	1710	1710					0.12080264045289368
ALRRRDDRKKI	11	Unmodified	_ALRRRDDRKKI_					0	0	0			REV__CASP5|p.E189D|1|0.23|ENSG00000137757|chr11:105002178-105002178|C/G|missense_variant	REV__CASP5|p.E189D|1|0.23|ENSG00000137757|chr11:105002178-105002178|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1992675662041	3	476.295297	1425.86406	2.6646	0.0012691	1.3565	0.00064611	4.0212	0.0019153	476.29506031035595	53.925	0.25171	54.246	54.128	54.38	0.32088					12	7	2	0	0	0	0.14606	1	22567	22567		0.094841	0.094841	1	879380	+		1261	8178	605	611	1711	1711					0.1681651778824289
ALRRREWN	8	Unmodified	_ALRRREWN_					0	0	0		nc|ENSG00000221932|Q6WQI6|HEPN1	nc|ENSG00000221932|Q6WQI6|HEPN1	nc|ENSG00000221932|Q6WQI6|HEPN1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2187988162041	2	550.807231	1099.59991	1.7305	0.0009532	2.6315	0.0014495	4.3621	0.0024027	550.8091336322901	46.042	0.17805	46.371	46.271	46.449	0.32899					8	5	2	0	0	0	2.3239	1	19318	19318		0.79363	0	1	393430			1262	7999	606	612	1712	1712					0.05409307754371184
ALRSFLQAL	9	Unmodified	_ALRSFLQAL_					0	0	0		ENST00000418251.6_1_2:113943320-113958989:+|nuORF;ENST00000409656.5_1_2:113943320-113958989:+|nuORF;PSD4|p.I884Mfs*131|1|0.06|ENSG00000125637|chr2:113198767-113198767|C/-|frameshift_variant;nc|ENSG00000125637|Q8NDX1-2|PSD4;ENSG00000125637|ENST00000245796|PSD4	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	ENST00000418251.6_1_2:113943320-113958989:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8046142458916	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.334	1	67.722	67.222	68.222	1.3888								0	0	0	0.39421	1	27827	27827		9.3474	0	1				1263	2265	607	613	1713	1713					0.08902039576844345
ALRSGCDFAM	10	Unmodified	_ALRSGCDFAM_					0	0	0		ENST00000381482.7_1_20:2125208-2125481:+|nuORF	ENST00000381482.7_1_20:2125208-2125481:+|nuORF	ENST00000381482.7_1_20:2125208-2125481:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1600219607353	2	535.741519	1069.46849	2.0299	0.0010875	-3.5543	-0.0019042	-1.5243	-0.00081665	535.7397651920902	77.563	0.15432	77.88	77.796	77.95	0.31653					7	4	2	0	0	0	0.12556	1	32405	32405		0.35063	0	1	439010			1264	6234	608	614	1714	1714					-0.06347006720056925
ALRSRMWL	8	Unmodified	_ALRSRMWL_					0	0	0		ENST00000482270.5_1_22:31668491-31671520:+|nuORF	ENST00000482270.5_1_22:31668491-31671520:+|nuORF	ENST00000482270.5_1_22:31668491-31671520:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6265136599541	2	516.792204	1031.56985	1.8459	0.00095393	1.4496	0.00074916	3.2955	0.0017031	517.2937130937614	50.034	0.5591	52.012	51.569	52.128	1.9772					23	17	2	0	0	0	2.3239	1	20957	20957		9.3474	0.75416	1	3100800			1265	6833	609	615	1715	1715					0.055332327648102364
ALSALKKAQ	9	Unmodified	_ALSALKKAQ_					0	0	0		ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2930480837822	2	465.292559	928.570566	2.3515	0.0010941	-0.61881	-0.00028793	1.7327	0.00080621	465.2923429910947	48.848	0.32156	48.848	48.68	49.002	0					16	9	2	0	0	0	0.27148	1	20368	20368		26.884	0.61551	1	1160500			1266	2892	610	616	1716	1716					0.10342350685505153
ALSALKKAQ	9	Unmodified	_ALSALKKAQ_					0	0	0		ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2934142947197	2	465.292559	928.570566	2.0802	0.00096792	0.38698	0.00018006	2.4672	0.001148	465.2926982861877	46.638	0.34692	48.013	47.832	48.179	1.3751					25	10	3	0	0	0	0.11643	1	19503	19503		43.858	1.9027	1	2872000			1267	2892	610	616	1717	1717					0.10342350685505153
ALSALKKAQ	9	Unmodified	_ALSALKKAQ_					0	0	0		ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	ENSG00000139725|ENST00000267205|RHOF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2935058474541	2	465.292559	928.570566	1.6907	0.00078666	0.39012	0.00018152	2.0808	0.00096818	465.2928149038774	46.17	0.4036	48.141	47.943	48.347	1.9703					28	12	3	0	0	0	0.083604	1	19361	19361		54.774	1.3695	1	2273000			1268	2892	610	616	1718	1718					0.10342350685505153
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7780029177666	2	534.777274	1067.53999	1.0881	0.0005819	-0.11954	-6.3928E-05	0.96858	0.00051798	534.777363661915	28.53	0.36857	29.809	29.607	29.975	1.2793					26	11	3	0	0	0	0.022807	1	11964	11964		97.075	68.588	1	4034300			1269	3255	611	617	1719	1719					0.008925723004722386
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	356.8539916872978	3	356.853941	1067.53999	0.32554	0.00011617	-0.070804	-2.5267E-05	0.25474	9.0904E-05	356.8539351524992	27.935	0.31034	29.711	29.571	29.881	1.7754					28	9	4	0	0	0	0.24063	1	11697	11697		26.268	14.773	1	5033200			1270	3255	611	617	1720	1720					0.008925723004722386
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7770873904228	2	534.777274	1067.53999	0.94589	0.00050584	0.41861	0.00022386	1.3645	0.00072971	534.7775476873402	27.936	0.37045	29.711	29.54	29.911	1.7754					26	11	3	0	0	0	0.02596	1	11699	11699		93.883	55.732	1	3752600			1271	3255	611	617	1721	1721					0.008925723004722386
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	534.777274	1067.53999	1.2423	0.00066434	0.77367	0.00041374	2.0159	0.0010781	534.7777206712285	30.167	0.33949	30.167	30.008	30.347	0	0.23043	0.00029757	NaN	97.075	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1254300			1272	3255	611	617							0.008925723004722386
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.777274	1067.53999	1.193	0.00063797	0.84973	0.00045441	2.0427	0.0010924	534.7778217772143	29.772	0.24437	30.058	29.902	30.146	0.2859	0.12163	0.00037892	NaN	97.075	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1373100			1273	3255	611	617							0.008925723004722386
ALSDHHIYL	9	Unmodified	_ALSDHHIYL_					0	0	0		nc|ENSG00000149925|P04075|ALDOA;ENSG00000149925|ENST00000642816|ALDOA	nc|ENSG00000149925|P04075|ALDOA	nc|ENSG00000149925|P04075|ALDOA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	356.853941	1067.53999	0.81875	0.00029217	0.0083106	2.9657E-06	0.82706	0.00029514	356.8538316568991	29.794	0.33494	30.08	29.84	30.175	0.2859	0.20837	9.4613E-05	NaN	26.268	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1136300			1274	3255	611	617							0.008925723004722386
ALSDHLRSIE	10	Unmodified	_ALSDHLRSIE_					0	0	0			REV__ENSG00000118363|ENST00000263672|SPCS2	REV__ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.8044311404228	2	570.80402	1139.59349	0.72285	0.00041261	1.6625	0.00094895	2.3853	0.0013616	570.8051596130776	23.014	0.27152	23.014	22.837	23.109	0					17	8	3	0	0	0	0.82019	1	9568	9568		10.074	1.9184	1	1299200	+		1275	9519	612	618	1722	1722					0.029273250123424077
ALSDHLRSIE	10	Unmodified	_ALSDHLRSIE_					0	0	0			REV__ENSG00000118363|ENST00000263672|SPCS2	REV__ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8051635622978	2	570.80402	1139.59349	1.1252	0.00064228	0.29015	0.00016562	1.4154	0.0008079	570.8045024598246	22.078	0.27289	23.255	23.14	23.413	1.177					14	8	2	0	0	0	0.82019	2	9220	9220;9268		10.074	2.7847	1	1207700	+		1276	9519	612	618	1723;1724	1723					0.029273250123424077
ALSDHLRSIE	10	Unmodified	_ALSDHLRSIE_					0	0	0			REV__ENSG00000118363|ENST00000263672|SPCS2	REV__ENSG00000118363|ENST00000263672|SPCS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8030883669853	2	570.80402	1139.59349	0.51881	0.00029614	0.53775	0.00030695	1.0566	0.00060309	570.8046285358583	21.749	0.25451	23.365	23.232	23.486	1.6158					14	8	2	0	0	0	0.82019	1	9069	9069		10.074	2.7847	1	1153700	+		1277	9519	612	618	1725	1725					0.029273250123424077
ALSDLALHFL	10	Unmodified	_ALSDLALHFL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2186767458916	2	550.310949	1098.60735	1.8371	0.001011	-0.70435	-0.00038761	1.1328	0.00062338	550.3108230415937	82.914	0.27707	82.914	82.737	83.014	0					15	8	2	0	0	0	0.1245	1	34558	34558		15.847	8.558	1	1206900			1278	1923	613	619	1726	1726					0.06198602511403806
ALSDLALHFL	10	Unmodified	_ALSDLALHFL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2185546755791	2	550.310949	1098.60735	2.1736	0.0011962	-0.79391	-0.00043689	1.3797	0.00075927	550.311049858987	82.396	0.2453	82.676	82.52	82.766	0.2802					14	7	2	0	0	0	0.12397	1	34443	34443		15.847	9.6414	1	845690			1279	1923	613	619	1727	1727					0.06198602511403806
ALSDLALHFL	10	Unmodified	_ALSDLALHFL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.3134033083916	2	550.310949	1098.60735	3.1582	0.001738	0.40239	0.00022144	3.5605	0.0019594	550.3113350456524	81.439	0.34003	82.672	82.471	82.811	1.2332					23	10	3	0	0	0	0.047918	1	34182	34182		85.357	45.399	1	1941900			1280	1923	613	619	1728	1728					0.06198602511403806
ALSDLALHFL	10	Unmodified	_ALSDLALHFL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.3131591677666	2	550.310949	1098.60735	2.6184	0.0014409	1.4033	0.00077227	4.0217	0.0022132	550.311868208925	81.019	0.31297	82.715	82.517	82.829	1.6959					22	9	3	0	0	0	0.062633	1	33989	33989		97.075	52.668	1	1762400			1281	1923	613	619	1729	1729					0.06198602511403806
ALSDLEITL	9	Unmodified	_ALSDLEITL_					0	0	0		nc|ENSG00000073712|Q96AC1-2|FERMT2;ENSG00000073712|ENST00000341590|FERMT2;nc|ENSG00000073712|Q96AC1-3|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5412475466728	1	974.540454	973.533177	1.7781	0.0017328	-0.74794	-0.0007289	1.0302	0.0010039	974.5392326329896	74.189	0.3196	74.189	74.014	74.334	0					17	9	2	0	0	0	0.031324	1	30888	30888		85.357	3.7437	1	1131900			1282	903	614	620	1730	1730					0.04535214629231632
ALSDYDLVL	9	Unmodified	_ALSDYDLVL_					0	0	0		VTCN1-GNAI3|1|fusion;ENSG00000065135|ENST00000369851|GNAI3;nc|ENSG00000127955|P63096-2|GNAI1;ENSG00000127955|ENST00000649796|GNAI1	VTCN1-GNAI3|1|fusion	VTCN1-GNAI3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.529040515423	1	1008.5248	1007.51753	1.663	0.0016772	0.5374	0.00054198	2.2004	0.0022192	1008.5262373158337	69.192	0.21628	71.045	70.92	71.136	1.853					15	6	3	0	0	0	0.09539	1	29036	29036		50.855	22.368	1	1368100			1283	780	615	621	1731	1731					0.014069281121805943
ALSDYDLVL	9	Unmodified	_ALSDYDLVL_					0	0	0		VTCN1-GNAI3|1|fusion;ENSG00000065135|ENST00000369851|GNAI3;nc|ENSG00000127955|P63096-2|GNAI1;ENSG00000127955|ENST00000649796|GNAI1	VTCN1-GNAI3|1|fusion	VTCN1-GNAI3|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1008.5248	1007.51753	1.6617	0.0016759	0.055894	5.6371E-05	1.7176	0.0017322	1008.5245396813232	70.727	0.18787	71.05	70.924	71.112	0.32359	0.012688	-0.00065117	NaN	50.855	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	301010			1284	780	615	621							0.014069281121805943
ALSDYDLVL	9	Unmodified	_ALSDYDLVL_					0	0	0		VTCN1-GNAI3|1|fusion;ENSG00000065135|ENST00000369851|GNAI3;nc|ENSG00000127955|P63096-2|GNAI1;ENSG00000127955|ENST00000649796|GNAI1	VTCN1-GNAI3|1|fusion	VTCN1-GNAI3|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1008.5248	1007.51753	2.4004	0.0024209	1.6745	0.0016888	4.0749	0.0041097	1008.524386202707	69.653	0.31274	71.018	70.847	71.159	1.3657	-0.019504	0.00098122	NaN	50.855	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1466100			1285	780	615	621							0.014069281121805943
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2805663943291	2	501.279315	1000.54408	2.0073	0.0010062	0.18505	9.2762E-05	2.1923	0.001099	501.2793245292711	63.13	0.50223	63.13	62.864	63.366	0					43	15	4	0	0	0	0.0075027	4	26298	26250;26298;26337;26386		112.59	14.243	1	10811000			1286	4159	616	622	1732;1733;1734;1735	1733					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2804138064384	2	501.279315	1000.54408	2.4425	0.0012244	-0.22914	-0.00011486	2.2133	0.0011095	501.279170511411	62.717	0.4668	63.047	62.757	63.224	0.32974					41	14	4	0	0	0	0.018723	3	26243	26196;26243;26295		100.37	15.015	1	11467000			1287	4159	616	622	1736;1737;1738	1737					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2808410525322	2	501.279315	1000.54408	3.047	0.0015274	-1.204	-0.00060352	1.8431	0.00092389	501.27871547119435	61.555	0.4297	62.973	62.683	63.113	1.4177					47	13	5	0	0	0	0.0082953	3	25792	25743;25792;25831		109.63	25.949	1	37055000			1288	4159	616	622	1739;1740;1741	1740					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1001.551501452923	1	1001.55135	1000.54408	3.5564	0.0035619	-1.0127	-0.0010143	2.5436	0.0025476	1001.5503729310682	61.534	0.33875	62.951	62.774	63.113	1.4177					29	10	4	0	0	0	0.0082953	2	25776	25776;25822		109.63	12.555	1	3053300			1289	4159	616	622	1742;1743	1742					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2805969119072	2	501.279315	1000.54408	2.3863	0.0011962	-1.6263	-0.00081521	0.76001	0.00038098	501.27853799352744	61.055	0.3373	63.02	62.729	63.067	1.9653					20	10	2	0	0	0	0.018723	3	25584	25540;25584;25634		100.37	17.377	1	34150000			1290	4159	616	622	1744;1745;1746	1745					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1001.555041491985	1	1001.55135	1000.54408	2.8934	0.0028979	-0.21923	-0.00021957	2.6742	0.0026783	1001.5508378268528	61.023	0.33674	62.988	62.82	63.157	1.9653					18	10	2	0	0	0	0.022807	2	25593	25593;25644		97.075	22.652	1	2721200			1291	4159	616	622	1747;1748	1747					0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1001.55135	1000.54408	2.0654	0.0020686	-0.69578	-0.00069686	1.3696	0.0013717	1001.5505729374164	63.096	0.25314	63.096	62.987	63.24	0	0.084706	-0.00023915	NaN	109.63	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660690			1292	4159	616	622							0.04382617003534506
ALSEELVQL	9	Unmodified	_ALSEELVQL_					0	0	0		ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	ENSG00000170759|ENST00000302418|KIF5B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1001.55135	1000.54408	2.1091	0.0021124	0.43189	0.00043256	2.541	0.0025449	1001.5522937361726	62.68	0.28002	63.01	62.85	63.13	0.32974	-0.0014874	0.00089026	NaN	109.63	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	698480			1293	4159	616	622							0.04382617003534506
ALSEFKAMDSI	11	Unmodified	_ALSEFKAMDSI_					0	0	0		ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-3|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3038818240166	2	606.302464	1210.59037	1.5975	0.00096855	2.5584	0.0015512	4.1559	0.0025197	606.3031955049823	48.287	0.28277	49.675	49.521	49.804	1.388					19	8	3	0	0	0	0.11371	1	20212	20212		53.317	9.5443	1	1894100			1294	670	617	623	1749	1749					-0.006496861567029555
ALSEFKAMDSI	11	Unmodified	_ALSEFKAMDSI_					0	0	0		ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1;ENST00000522792.1_1_5:138268134-138269775:+|nuORF;nc|ENSG00000044115|P35221-3|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3060790896416	2	606.302464	1210.59037	2.4384	0.0014784	0.79901	0.00048444	3.2375	0.0019629	606.3028336296503	47.805	0.24693	49.781	49.681	49.928	1.976					17	7	3	0	0	0	0.14486	1	20018	20018		47.732	14.946	1	1790600			1295	670	617	623	1750	1750					-0.006496861567029555
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.6008178591728	1	972.597575	971.590298	1.7106	0.0016637	-1.748	-0.0017001	-0.037458	-3.6432E-05	972.5965740296815	79.345	0.37127	79.345	79.144	79.515	0					25	11	3	0	0	0	0.076627	1	33016	33016		57.471	11.45	1	1705700			1296	458	618	624	1751	1751					0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.8044921755791	2	486.802426	971.590298	1.7278	0.00084108	0.74011	0.00036029	2.4679	0.0012014	486.8027422799731	79.314	0.3415	79.314	79.144	79.485	0					16	10	2	0	0	0	0.069258	1	33017	33017		60.39	18.295	1	983550			1297	458	618	624	1752	1752					0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.5966064333916	1	972.597575	971.590298	1.7037	0.001657	-1.0607	-0.0010316	0.64294	0.00062532	972.5960801006848	78.873	0.33111	79.182	78.988	79.319	0.30933					19	10	2	0	0	0	0.051699	2	32985	32936;32985		67.344	12.57	1	1796600			1298	458	618	624	1753;1754	1754					0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.6002685427666	1	972.597575	971.590298	2.2013	0.0021409	-1.1255	-0.0010947	1.0758	0.0010463	972.5965084225438	77.871	0.30664	79.152	78.982	79.289	1.2809					16	9	2	0	0	0	0.042029	1	32677	32677		74.423	19.649	1	2258600			1299	458	618	624	1755	1755					0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.6002075076103	1	972.597575	971.590298	0.91015	0.00088521	1.3892	0.0013512	2.2994	0.0022364	972.5981616286493	77.41	0.31296	79.161	78.977	79.29	1.7514					15	9	2	0	0	0	0.03795	1	32481	32481		77.984	17.595	1	1449400			1300	458	618	624	1756	1756					0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	486.802426	971.590298	2.4229	0.0011795	-1.2543	-0.00061058	1.1686	0.00056888	486.80102523560896	78.873	0.26793	79.182	78.988	79.256	0.30933	-0.003257	-0.0014085	NaN	60.39	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	880290			1301	458	618	624							0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	486.802426	971.590298	2.5366	0.0012348	0.32829	0.00015981	2.8649	0.0013946	486.8028083475519	77.749	0.30664	79.03	78.982	79.289	1.2809	-0.15571	0.00013231	NaN	60.39	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1068700			1302	458	618	624							0.10336681905619116
ALSELIILT	9	Unmodified	_ALSELIILT_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1;nc|ENSG00000001630|Q16850-2|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	486.802426	971.590298	1.137	0.0005535	-3.2833	-0.0015983	-2.1463	-0.0010448	486.8034037016185	77.465	0.34621	79.216	78.915	79.261	1.7514	0.030501	-0.0033839	NaN	60.39	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907030			1303	458	618	624							0.10336681905619116
ALSGDLAVTL	10	Unmodified	_ALSGDLAVTL_					0	0	0			REV__nc|ENSG00000123179|Q9BY08-5|EBPL	REV__nc|ENSG00000123179|Q9BY08-5|EBPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2753478884697	2	480.274032	958.533512	3.1056	0.0014916	0.83902	0.00040296	3.9447	0.0018945	480.27442522977486	61.397	0.27439	62.815	62.714	62.988	1.4177					19	8	3	0	0	0	0.65574	1	25803	25803		20.454	1.1966	1	2302700	+		1304	9619	619	625	1757	1757					0.05258634349092972
ALSGDLAVTL	10	Unmodified	_ALSGDLAVTL_					0	0	0			REV__nc|ENSG00000123179|Q9BY08-5|EBPL	REV__nc|ENSG00000123179|Q9BY08-5|EBPL	MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2748901247978	2	480.274032	958.533512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.019	1	62.984	62.484	63.484	1.9653								0	0	0	0.61972	1	25605	25605		20.454	3.5113	1		+		1305	9619	619	625	1758	1758					0.05258634349092972
ALSGLAVRL	9	Unmodified	_ALSGLAVRL_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;ENSG00000196972|ENST00000433425|SMIM10L2B;ENSG00000178947|ENST00000417443|SMIM10L2A;ENST00000533877.1_1_7:6381544-6388389:-|nuORF	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2878600955009	2	450.287277	898.560001	2.2748	0.0010243	0.1069	4.8137E-05	2.3817	0.0010724	450.2872615638569	49.509	0.28859	49.84	49.696	49.984	0.33019					15	8	2	0	0	0	0.091139	1	20742	20742		52.268	18.166	1	1452000			1306	4708	620	626	1759	1759					0.10666368031081674
ALSGLAVRL	9	Unmodified	_ALSGLAVRL_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;ENSG00000196972|ENST00000433425|SMIM10L2B;ENSG00000178947|ENST00000417443|SMIM10L2A;ENST00000533877.1_1_7:6381544-6388389:-|nuORF	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2882873415947	2	450.287277	898.560001	2.1313	0.00095971	0.0013449	6.0561E-07	2.1327	0.00096032	450.28729011269775	48.024	0.37596	49.412	49.209	49.585	1.388					26	11	3	0	0	0	0.033504	2	20131	20093;20131		81.89	28.057	1	5257300			1307	4708	620	626	1760;1761	1761					0.10666368031081674
ALSGLAVRL	9	Unmodified	_ALSGLAVRL_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;ENSG00000196972|ENST00000433425|SMIM10L2B;ENSG00000178947|ENST00000417443|SMIM10L2A;ENST00000533877.1_1_7:6381544-6388389:-|nuORF	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2879211306572	2	450.287277	898.560001	2.782	0.0012527	-0.79427	-0.00035765	1.9877	0.00089503	450.2867602065609	47.536	0.33802	49.512	49.311	49.649	1.976					26	10	3	0	0	0	0.029093	2	19874	19874;19923		88.904	27.546	1	5664300			1308	4708	620	626	1762;1763	1762					0.10666368031081674
ALSGLAVRL	9	Unmodified	_ALSGLAVRL_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10;nc|ENSG00000286075|A0A0C4DGP1|SMIM10L3;ENSG00000196972|ENST00000433425|SMIM10L2B;ENSG00000178947|ENST00000417443|SMIM10L2A;ENST00000533877.1_1_7:6381544-6388389:-|nuORF	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	450.287277	898.560001	1.9133	0.00086153	-0.63593	-0.00028635	1.2774	0.00057518	450.28694646592714	50.157	0.25391	50.157	49.991	50.245	0	0.15855	-0.00036161	NaN	52.268	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1782800			1309	4708	620	626							0.10666368031081674
ALSGSLLGIL	10	Unmodified	_ALSGSLLGIL_					0	0	0			REV__nc|ENSG00000171365|P51795-1|CLCN5	REV__nc|ENSG00000171365|P51795-1|CLCN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2954894900322	2	472.294768	942.574983	2.3156	0.0010936	-1.5667	-0.00073993	0.74893	0.00035372	472.2939552466058	40.237	0.49651	42.1	41.862	42.359	1.8624					41	15	4	0	0	0	0.058389	1	16859	16859		92.822	3.9185	1	13000000	+		1310	11022	621	627	1764	1764					0.10139815108436778
ALSKEGIVAL	10	Unmodified	_ALSKEGIVAL_					0	0	0		ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.8064147830009	2	500.8055	999.596446	1.6171	0.00080987	1.3487	0.00067543	2.9658	0.0014853	500.80605365306417	40.68	0.36945	40.68	40.458	40.827	0					26	11	3	0	0	0	0.19554	2	17031	17031;17076		49.527	1.7786	1	3691000			1311	3161	622	628	1765;1766	1765					0.09663200137140393
ALSKEGIVAL	10	Unmodified	_ALSKEGIVAL_					0	0	0		ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8067504763603	2	500.8055	999.596446	2.2445	0.001124	1.2846	0.00064334	3.5291	0.0017674	500.8058997953312	40.105	0.31276	40.418	40.227	40.539	0.31263					22	9	3	0	0	0	0.13797	1	16845	16845		57.249	4.9808	1	3261300			1312	3161	622	628	1767	1767					0.09663200137140393
ALSKEGIVAL	10	Unmodified	_ALSKEGIVAL_					0	0	0		ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8056823611259	2	500.8055	999.596446	1.8763	0.00093968	-0.96811	-0.00048484	0.90822	0.00045484	500.8049186654905	38.672	0.35806	39.968	39.774	40.132	1.2961					27	11	3	0	0	0	0.050585	2	16213	16213;16256		87.258	22.023	1	8749200			1313	3161	622	628	1768;1769	1768					0.09663200137140393
ALSKEGIVAL	10	Unmodified	_ALSKEGIVAL_					0	0	0		ENST00000482776.1_1_7:56124009-56126486:+|nuORF;nc|ENSG00000146731|P40227-2|CCT6A;ENSG00000146731|ENST00000275603|CCT6A	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	ENST00000482776.1_1_7:56124009-56126486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8059265017509	2	500.8055	999.596446	0.6821	0.0003416	0.089315	4.4729E-05	0.77141	0.00038633	500.80548934509306	38.043	0.36674	39.863	39.67	40.036	1.8202					27	11	3	0	0	0	0.050585	1	15974	15974		87.258	12.329	1	9302500			1314	3161	622	628	1770	1770					0.09663200137140393
ALSLLSLPPK	10	Unmodified	_ALSLLSLPPK_					0	0	0		nc|ENSG00000059122|Q4VC44-3|FLYWCH1;nc|ENSG00000059122|Q4VC44-2|FLYWCH1;ENSG00000059122|ENST00000253928|FLYWCH1	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	347.1707031130791	3	346.890104	1037.64848	1.7192	0.00059636	-3.1096	-0.0010787	-1.3905	-0.00048234	347.2247966452112	61.387	0.52322	62.805	62.683	63.206	1.4177					29	16	2	0	0	0	0.12547	1	25813	25813		1.9064	0	1	416290			1315	7823	623	629	1771	1771					0.13116363550875576
ALSLPPLSL	9	Unmodified	_ALSLPPLSL_					0	0	0		nc|ENSG00000224795|Q6ZSK4|NTM-AS1	nc|ENSG00000224795|Q6ZSK4|NTM-AS1	nc|ENSG00000224795|Q6ZSK4|NTM-AS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7859680056572	2	455.784036	909.553519	1.7939	0.00081764	0.48829	0.00022255	2.2822	0.0010402	455.78471650035675	66.106	0.41562	66.106	65.87	66.285	0					23	12	2	0	0	0	0.22519	1	27587	27587		30.225	0	1	1893500			1316	8000	624	630	1772	1772					0.09512430079723799
ALSLRLALA	9	Unmodified	_ALSLRLALA_					0	0	0		nc|ENSG00000179403|Q6PCB0-3|VWA1;ENSG00000179403|ENST00000476993|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.3024169802666	2	464.302927	926.591301	1.3296	0.00061733	-0.94753	-0.00043994	0.38204	0.00017738	464.302230121579	57.201	0.17519	58.615	58.521	58.696	1.4145					8	5	2	0	0	0	0.22861	1	23980	23980		29.841	2.2118	1	1218000			1317	4514	625	631	1773	1773					0.1250694106516903
ALSLRLALA	9	Unmodified	_ALSLRLALA_					0	0	0		nc|ENSG00000179403|Q6PCB0-3|VWA1;ENSG00000179403|ENST00000476993|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	464.302927	926.591301	2.3029	0.0010692	-0.64825	-0.00030098	1.6546	0.00076824	464.30241527073144	59.053	0.25147	59.053	58.91	59.161	0	0.29506	-0.001104	NaN	29.841	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	545800			1318	4514	625	631							0.1250694106516903
ALSLRLALA	9	Unmodified	_ALSLRLALA_					0	0	0		nc|ENSG00000179403|Q6PCB0-3|VWA1;ENSG00000179403|ENST00000476993|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	464.302927	926.591301	3.1319	0.0014541	1.559	0.00072384	4.6909	0.002178	464.30357449192405	58.465	0.2196	58.788	58.651	58.871	0.32299	0.030494	0.0009457	NaN	29.841	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	591330			1319	4514	625	631							0.1250694106516903
ALSLRLALA	9	Unmodified	_ALSLRLALA_					0	0	0		nc|ENSG00000179403|Q6PCB0-3|VWA1;ENSG00000179403|ENST00000476993|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	nc|ENSG00000179403|Q6PCB0-3|VWA1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	464.302927	926.591301	1.2028	0.00055848	0.89355	0.00041488	2.0964	0.00097336	464.303379853374	56.607	0.23676	58.575	58.456	58.693	1.9684	-0.18269	0.00032777	NaN	29.841	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	924360			1320	4514	625	631							0.1250694106516903
ALSMPKKNL	9	Unmodified	_ALSMPKKNL_					0	0	0			REV__nc|ENSG00000047849|P27816-5|MAP4	REV__nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2948181033134	2	501.294245	1000.57394	3.1218	0.001565	0.50801	0.00025466	3.6298	0.0018196	501.2942363791512	65.103	0.46973	66.502	66.255	66.724	1.3989					36	14	3	0	0	0	0.54523	1	27343	27343		13.508	0	1	3607400	+		1321	8610	626	632	1774	1774					0.07367277467881195
ALSMPKKNL	9	Unmodified	_ALSMPKKNL_					0	0	0			REV__nc|ENSG00000047849|P27816-5|MAP4	REV__nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2956725955009	2	501.294245	1000.57394	1.7325	0.00086851	1.3682	0.00068587	3.1007	0.0015544	501.29457165450225	64.683	0.75783	66.611	66.045	66.803	1.928					41	23	3	0	0	0	0.54523	1	27123	27123		13.508	0	1	3333800	+		1322	8610	626	632	1775	1775					0.07367277467881195
ALSNLEVTL	9	Unmodified	_ALSNLEVTL_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2769042849541	2	480.274032	958.533512	3.1056	0.0014916	0.83902	0.00040296	3.9447	0.0018945	480.27442522977486	61.397	0.27439	62.815	62.714	62.988	1.4177					19	8	3	0	0	0	0.045797	1	25748	25748		71.134	20.279	1	2302700			1323	1337	627	633	1776	1776					0.05258634349092972
ALSNLEVTL	9	Unmodified	_ALSNLEVTL_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	959.5306274294853	1	959.540788	958.533512	2.8886	0.0027718	0.11849	0.0001137	3.0071	0.0028855	959.5411742267157	60.963	0.30643	62.928	62.729	63.036	1.9653					16	9	2	0	0	0	0.029061	2	25528	25528;25575		88.954	17.032	1	1784500			1324	1337	627	633	1777;1778	1777					0.05258634349092972
ALSNLEVTL	9	Unmodified	_ALSNLEVTL_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2782470583916	2	480.274032	958.533512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.898	1	62.863	62.363	63.363	1.9653								0	0	0	0.11571	1	25554	25554		32.305	6.9062	1				1325	1337	627	633	1779	1779					0.05258634349092972
ALSNLEVTL	9	Unmodified	_ALSNLEVTL_					0	0	0		nc|ENSG00000101311|Q9BQL6-4|FERMT1;nc|ENSG00000101311|Q9BQL6-2|FERMT1;ENSG00000101311|ENST00000217289|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	nc|ENSG00000101311|Q9BQL6-4|FERMT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	959.540788	958.533512	1.9101	0.0018329	-0.89429	-0.00085811	1.0159	0.00097475	959.5401936868443	62.598	0.30991	62.927	62.757	63.067	0.32974	-0.017099	-0.00052351	NaN	88.954	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	554390			1326	1337	627	633							0.05258634349092972
ALSQDIPEI	9	Unmodified	_ALSQDIPEI_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2643615603447	2	493.263665	984.512776	2.0973	0.0010345	2.4851	0.0012258	4.5824	0.0022603	493.264321572512	54.367	0.45609	56.336	56.127	56.583	1.9684					32	14	3	0	0	0	0.19075	1	22809	22809		34.102	1.797	1	2746200			1327	654	628	634	1780	1780					0.01990043969431099
ALSQDIPEI	9	Unmodified	_ALSQDIPEI_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.263665	984.512776	1.6061	0.00079224	2.7858	0.0013741	4.3919	0.0021664	493.2646799344906	54.762	0.47104	56.167	56.027	56.499	1.4048	-0.12126	-0.00045306	NaN	34.102	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2766400			1328	654	628	634							0.01990043969431099
ALSQYLTDR	9	Unmodified	_ALSQYLTDR_					0	0	0		ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1908447146416	2	533.780013	1065.54547	0.77156	0.00041184	-0.25208	-0.00013455	0.51948	0.00027729	533.7797612205995	19.222	0.31027	19.222	19.045	19.356	0					29	9	4	0	0	0	0.11275	1	8042	8042		10.074	2.7847	1	8744000			1329	4552	629	635	1781	1781					0.015322510922487709
ALSQYLTDR	9	Unmodified	_ALSQYLTDR_					0	0	0		ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	534.2169067263603	2	533.780013	1065.54547	0.61502	0.00032828	1.0535	0.00056233	1.6685	0.00089061	533.7803553559605	18.847	0.30795	19.04	18.893	19.201	0.19342					15	9	2	0	0	0	0.098208	1	7843	7843		18.146	0	1	1893100			1330	4552	629	635	1782	1782					0.015322510922487709
ALSSDSTE	8	Unmodified	_ALSSDSTE_					0	0	0		ENST00000298355.7_1_14:51561947-51562040:-|nuORF	ENST00000298355.7_1_14:51561947-51562040:-|nuORF	ENST00000298355.7_1_14:51561947-51562040:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1779052615166	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.647	1	43.987	43.487	44.487	1.3399								0	0	0	1.0178	1	17876	17876		5.7604	0	1				1331	5741	630	636	1783	1783					-0.06679643295183268
ALSSLLHAL	9	Unmodified	_ALSSLLHAL_					0	0	0		ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	462.7810851931572	2	462.779285	923.544017	2.2314	0.0010326	0.59207	0.000274	2.8235	0.0013066	462.7795889188464	58.64	0.38807	58.64	58.428	58.816	0					26	11	3	0	0	0	0.087207	2	24461	24461;24502		53.576	0	1	4998900			1332	6839	631	637	1784;1785	1784					0.0791866179419003
ALSSLLHAL	9	Unmodified	_ALSSLLHAL_					0	0	0		ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	462.7804138064384	2	462.779285	923.544017	3.0714	0.0014214	-0.83192	-0.000385	2.2395	0.0010364	462.77892242251676	58.069	0.38345	58.392	58.204	58.587	0.32299					29	11	3	0	0	0	0.11478	1	24353	24353		44.407	0	1	3798400			1333	6839	631	637	1786	1786					0.0791866179419003
ALSSLLHAL	9	Unmodified	_ALSSLLHAL_					0	0	0		ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	462.7802001833916	2	462.779285	923.544017	2.0136	0.00093185	-0.3386	-0.0001567	1.675	0.00077515	462.7790620664149	56.785	0.36723	58.199	58.033	58.4	1.4145					24	11	3	0	0	0	0.033521	2	23829	23780;23829		81.864	0	1	8340700			1334	6839	631	637	1787;1788	1788					0.0791866179419003
ALSSLLHAL	9	Unmodified	_ALSSLLHAL_					0	0	0		ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	ENST00000483233.5_1_3:52003252-52003432:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	462.7798644900322	2	462.779285	923.544017	1.441	0.00066684	-0.16491	-7.6319E-05	1.276	0.00059052	462.77915849934766	56.22	0.33887	58.188	57.995	58.334	1.9684					26	10	3	0	0	0	0.061246	2	23585	23539;23585		63.563	0	1	5289200			1335	6839	631	637	1789;1790	1790					0.0791866179419003
ALSSRYLGD	9	Unmodified	_ALSSRYLGD_					0	0	0		SERTAD3|p.N173Qfs*13|1|0.05|ENSG00000167565|chr19:40441565-40441566|-/A|frameshift_variant;ENSG00000167565|ENST00000322354|SERTAD3	SERTAD3|p.N173Qfs*13|1|0.05|ENSG00000167565|chr19:40441565-40441566|-/A|frameshift_variant	SERTAD3|p.N173Qfs*13|1|0.05|ENSG00000167565|chr19:40441565-40441566|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2559997439384	2	491.253631	980.49271	1.8881	0.00092756	2.6844	0.0013187	4.5725	0.0022463	491.25521626362143	38.724	0.42252	40.02	39.774	40.197	1.2961					36	13	3	0	0	0	0.13873	1	16277	16277		39.957	1.8061	1	9326900			1336	3976	632	638	1791	1791					0.0016829302948053737
ALSSVYLLL	9	Unmodified	_ALSSVYLLL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7964965701103	2	489.797143	977.579734	1.7583	0.0008612	-1.6534	-0.00080985	0.10484	5.1352E-05	489.79672867849297	80.529	0.33427	82.246	82.05	82.385	1.7167					22	10	3	0	0	0	0.11478	1	33791	33791		44.407	8.3628	1	2585400			1337	1428	633	639	1792	1792					0.09004699251204329
ALSSVYLLL	9	Unmodified	_ALSSVYLLL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.797143	977.579734	3.0357	0.0014869	-0.69144	-0.00033866	2.3442	0.0011482	489.7971999121474	80.977	0.33771	82.21	82.041	82.378	1.2332	-0.017908	0.00042551	NaN	44.407	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2367200			1338	1428	633	639							0.09004699251204329
ALSSYDFNEDL	11	Unmodified	_ALSSYDFNEDL_					0	0	0			REV__nc|ENSG00000139220|O75334-7|PPFIA2	REV__nc|ENSG00000139220|O75334-7|PPFIA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	637.7868530154228	2	637.282783	1272.55101	2.8333	0.0018056	0.93471	0.00059568	3.7681	0.0024013	637.2830693293482	85.478	0.31026	85.478	85.323	85.633	0					22	9	3	0	0	0	0.89563	1	35628	35628		10.074	1.3285	1	476430	+		1339	10099	634	640	1793	1793					-0.07436114906568037
ALSVILRSV	9	Unmodified	_ALSVILRSV_					0	0	0		ENST00000424720.2_12:132824120-132905933:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9;ENSG00000182870|ENST00000328957|GALNT9;ENSG00000185274|ENST00000333538|GALNT17	ENST00000424720.2_12:132824120-132905933:-|nuORF	ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.3051635622978	2	479.30821	956.601866	2.2766	0.0010912	-0.24759	-0.00011867	2.029	0.00097251	479.3081496605905	51.293	0.34296	51.293	51.135	51.478	0					24	10	3	0	0	0	0.099302	2	21364	21364;21415		49.554	3.8547	1	2525000			1340	4630	635	641	1794;1795	1794					0.12182923719615246
ALSVILRSV	9	Unmodified	_ALSVILRSV_					0	0	0		ENST00000424720.2_12:132824120-132905933:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9;ENSG00000182870|ENST00000328957|GALNT9;ENSG00000185274|ENST00000333538|GALNT17	ENST00000424720.2_12:132824120-132905933:-|nuORF	ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.3090698122978	2	479.30821	956.601866	2.5286	0.001212	-0.33119	-0.00015874	2.1974	0.0010532	479.3079803898194	50.699	0.37303	51.027	50.856	51.229	0.32824					27	11	3	0	0	0	0.046715	2	21283	21233;21283		70.332	3.884	1	2934600			1341	4630	635	641	1796;1797	1797					0.12182923719615246
ALSVILRSV	9	Unmodified	_ALSVILRSV_					0	0	0		ENST00000424720.2_12:132824120-132905933:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9;ENSG00000182870|ENST00000328957|GALNT9;ENSG00000185274|ENST00000333538|GALNT17	ENST00000424720.2_12:132824120-132905933:-|nuORF	ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.3100463747978	2	479.30821	956.601866	1.9909	0.00095426	0.81293	0.00038965	2.8038	0.0013439	479.30851545452543	49.331	0.46341	50.722	50.485	50.948	1.3911					40	14	4	0	0	0	0.019071	3	20693	20596;20639;20693		100.09	17.561	1	10461000			1342	4630	635	641	1798;1799;1800	1800					0.12182923719615246
ALSVILRSV	9	Unmodified	_ALSVILRSV_					0	0	0		ENST00000424720.2_12:132824120-132905933:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9;ENSG00000182870|ENST00000328957|GALNT9;ENSG00000185274|ENST00000333538|GALNT17	ENST00000424720.2_12:132824120-132905933:-|nuORF	ENST00000424720.2_12:132824120-132905933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.3092834353447	2	479.30821	956.601866	1.8778	0.00090006	0.73677	0.00035314	2.6146	0.0012532	479.3085204210857	48.765	0.37262	50.742	50.514	50.886	1.9772					34	11	4	0	0	0	0.0039211	3	20429	20383;20429;20472		125.04	32.384	1	12790000			1343	4630	635	641	1801;1802;1803	1802					0.12182923719615246
ALSVLYCLK	9	Unmodified	_ALSVLYCLK_					0	0	0			REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|148|1|anti-sense	REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|148|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2932922244072	2	505.291171	1008.56779	2.8312	0.0014306	-0.10624	-5.3683E-05	2.725	0.0013769	505.29115535091995	80.494	0.36771	81.745	81.544	81.912	1.2512					31	11	3	0	0	0	0.70108	1	33758	33758		7.2892	0	1	6534500	+		1344	14173	636	642	1804	1804					0.06384759236345872
ALSWILSIL	9	Unmodified	_ALSWILSIL_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3134338259697	2	508.312961	1014.61137	1.8522	0.00094151	-3.8574	-0.0019607	-2.0051	-0.0010192	508.3114323237003	49.544	0.34643	51.522	51.381	51.727	1.9772					24	10	3	0	0	0	0.11478	1	20736	20736		44.407	2.3125	1	3595100	+		1345	10680	637	643	1805	1805					0.1046469200515503
ALSWILSIL	9	Unmodified	_ALSWILSIL_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	508.312961	1014.61137	3.0717	0.0015614	-3.7427	-0.0019025	-0.67099	-0.00034107	508.3115630684629	50.206	0.35025	51.597	51.387	51.737	1.3911	0.037515	6.1337E-05	NaN	44.407	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3857500	+		1346	10680	637	643							0.1046469200515503
ALSWILSIL	9	Unmodified	_ALSWILSIL_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	508.312961	1014.61137	1.8522	0.00094151	-3.8574	-0.0019607	-2.0051	-0.0010192	508.3114323237003	49.544	0.34643	51.522	51.381	51.727	1.9772	-0.037515	-5.5219E-05	NaN	44.407	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3595100	+		1347	10680	637	643							0.1046469200515503
ALSWYDAQQ	9	Unmodified	_ALSWYDAQQ_					0	0	0		ENSG00000188585|ENST00000623247|CLEC20A	ENSG00000188585|ENST00000623247|CLEC20A	ENSG00000188585|ENST00000623247|CLEC20A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.2534667849541	2	541.251089	1080.48762	1.7836	0.0009654	-1.5927	-0.00086206	0.19091	0.00010333	541.2500164795347	58.38	0.35589	58.38	58.17	58.526	0					18	10	2	0	0	0	0.83213	1	24336	24336		2.0598	0.21551	1	1027300			1348	4870	638	644	1806	1806					-0.04940010833138331
ALTATATPVV	10	Unmodified	_ALTATATPVV_					0	0	0		tr|A0A553SMT0|A0A553SMT0_NIACIDNAhelicaseRecQOS=NialliacirculansOX=1397GN=recQPE=3SV=1	tr|A0A553SMT0|A0A553SMT0_NIACIDNAhelicaseRecQOS=NialliacirculansOX=1397GN=recQPE=3SV=1	tr|A0A553SMT0|A0A553SMT0_NIACIDNAhelicaseRecQOS=NialliacirculansOX=1397GN=recQPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2770873904228	2	472.276575	942.538597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.893	1	73.218	72.718	73.718	0.32494								0	0	0	0.66008	1	30493	30493		4.3292	1.44	1				1349	16391	639	645	1807	1807					0.06502938211713172
ALTDIVSQV	9	Unmodified	_ALTDIVSQV_					0	0	0		nc|ENSG00000137843|Q9NQU5-2|PAK6;ENSG00000137843|ENST00000560346|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2667114138603	2	473.266207	944.517862	1.0416	0.00049295	1.1027	0.00052186	2.1443	0.0010148	473.2664358265398	56.467	0.31021	57.881	57.722	58.033	1.4145					14	9	2	0	0	0	0.042029	2	23652	23652;23707		74.423	19.649	1	1873800			1350	2795	640	646	1808;1809	1808					0.04338347832049294
ALTDIVSQV	9	Unmodified	_ALTDIVSQV_					0	0	0		nc|ENSG00000137843|Q9NQU5-2|PAK6;ENSG00000137843|ENST00000560346|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2670471072197	2	473.266207	944.517862	1.3448	0.00063644	-0.31814	-0.00015056	1.0266	0.00048588	473.2660771614242	55.992	0.30624	57.96	57.811	58.117	1.9684					14	9	2	0	0	0	0.031324	1	23472	23472		85.357	10.934	1	2175800			1351	2795	640	646	1810	1810					0.04338347832049294
ALTDIVSQV	9	Unmodified	_ALTDIVSQV_					0	0	0		nc|ENSG00000137843|Q9NQU5-2|PAK6;ENSG00000137843|ENST00000560346|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	nc|ENSG00000137843|Q9NQU5-2|PAK6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	473.266207	944.517862	2.4567	0.0011627	-0.34538	-0.00016346	2.1113	0.00099922	473.2661853279022	57.718	0.15893	57.718	57.658	57.817	0	-0.13469	-0.00034163	NaN	85.357	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526740			1352	2795	640	646							0.04338347832049294
ALTEIAFVV	9	Unmodified	_ALTEIAFVV_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7822448611259	2	481.781493	961.548434	2.0247	0.00097544	-0.17744	-8.5488E-05	1.8472	0.00088995	481.7810629879775	80.15	0.21641	80.15	80.009	80.226	0					8	6	2	0	0	0	0.76456	1	33383	33383		4.756	1.8668	1	702050			1353	4148	641	647	1811	1811					0.06612126217089553
ALTELLAKI	9	Unmodified	_ALTELLAKI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.3105956912041	2	486.310418	970.606283	1.6847	0.00081928	-1.7183	-0.00083561	-0.033573	-1.6327E-05	486.30949644355405	67.239	0.51433	67.239	66.99	67.504	0					47	16	4	0	0	0	2.9716E-05	4	28048	27951;27997;28048;28091		163.04	74.132	1	24563000			1354	2053	642	648	1812;1813;1814;1815	1814					0.11980388142512766
ALTELLAKI	9	Unmodified	_ALTELLAKI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.3120910525322	2	486.310418	970.606283	2.619	0.0012736	-0.13865	-6.7425E-05	2.4803	0.0012062	486.3102925705152	66.724	0.43878	67.048	66.843	67.282	0.32449					40	13	4	0	0	0	2.9716E-05	4	27931	27885;27931;27970;28017		163.04	66.751	1	26041000			1355	2053	642	648	1816;1817;1818;1819	1817					0.11980388142512766
ALTELLAKI	9	Unmodified	_ALTELLAKI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3116027712822	2	486.310418	970.606283	2.8246	0.0013736	-0.31574	-0.00015355	2.5089	0.0012201	486.3103531393499	65.464	0.52052	66.863	66.632	67.152	1.3989					51	16	4	0	0	0	2.9716E-05	4	27469	27393;27430;27469;27508		163.04	66.751	1	57948000			1356	2053	642	648	1820;1821;1822;1823	1822					0.11980388142512766
ALTELLAKI	9	Unmodified	_ALTELLAKI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3115722537041	2	486.310418	970.606283	1.8071	0.00087883	-0.030982	-1.5067E-05	1.7762	0.00086377	486.3104573780205	64.983	0.55994	66.891	66.658	67.218	1.9085					49	17	4	0	0	0	1.5898E-05	3	27223	27223;27272;27311		176.84	80.553	1	55896000			1357	2053	642	648	1824;1825;1826	1824					0.11980388142512766
ALTGYLHTI	9	Unmodified	_ALTGYLHTI_					0	0	0		ENST00000471788.1_1_2:207651391-207655428:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;ENSG00000118246|ENST00000402774|FASTKD2	ENST00000471788.1_1_2:207651391-207655428:+|nuORF	ENST00000471788.1_1_2:207651391-207655428:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7741577029228	2	494.776742	987.538931	2.4429	0.0012087	-4.3689	-0.0021617	-1.926	-0.00095294	494.77374260285296	44.39	0.19379	45.755	45.642	45.836	1.3653					8	5	2	0	0	0	0.046276	1	18605	18605		70.716	32.564	1	868660			1358	2034	643	649	1827	1827					0.0446635793156247
ALTGYLHTI	9	Unmodified	_ALTGYLHTI_					0	0	0		ENST00000471788.1_1_2:207651391-207655428:+|nuORF;nc|ENSG00000118246|Q9NYY8-2|FASTKD2;ENST00000487777.5_1_2:207631381-207653673:+|nuORF;ENSG00000118246|ENST00000402774|FASTKD2	ENST00000471788.1_1_2:207651391-207655428:+|nuORF	ENST00000471788.1_1_2:207651391-207655428:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	494.776742	987.538931	2.1792	0.0010782	-2.3165	-0.0011461	-0.13728	-6.7921E-05	494.77403379670136	43.71	0.19027	45.654	45.577	45.767	1.9438	-0.050346	0.0012763	NaN	70.716	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625670			1359	2034	643	649							0.0446635793156247
ALTIATLAT	9	Unmodified	_ALTIATLAT_					0	0	0		tr|A0A7D6ZWM7|A0A7D6ZWM7_9CLOTCyanophycinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19625PE=3SV=1	tr|A0A7D6ZWM7|A0A7D6ZWM7_9CLOTCyanophycinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19625PE=3SV=1	tr|A0A7D6ZWM7|A0A7D6ZWM7_9CLOTCyanophycinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19625PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	874.5311767458916	1	874.52441	873.517133	1.4686	0.0012843	4.3656	0.0038178	5.8342	0.0051022	874.5296474019613	50.197	0.20966	52.174	52.07	52.279	1.9772					11	6	2	0	0	0	0.09539	1	21021	21021		50.855	0	1	1269100			1360	17174	644	650	1828	1828					0.0753155318300287
ALTILRRKD	9	Unmodified	_ALTILRRKD_					0	0	0		ENSG00000088808|ENST00000202556|PPP1R13B;ENST00000555825.5_1_14:104201493-104202681:-|nuORF;ENST00000556334.5_1_14:104201493-104205387:-|nuORF;ENST00000555391.5_1_14:104201493-104210315:-|nuORF	ENSG00000088808|ENST00000202556|PPP1R13B	ENSG00000088808|ENST00000202556|PPP1R13B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2535888552666	3	362.564502	1084.67168	1.4634	0.00053057	-3.0017	-0.0010883	-1.5383	-0.00055775	362.8975568500327	78.161	0.40295	79.913	79.622	80.025	1.7514					18	12	2	0	0	0	0.11938	1	32825	32825		0.26902	0.1097	1	229790			1361	1108	645	651	1829	1829					0.13272802388246419
ALTKQRLEEEH	11	Unmodified	_ALTKQRLEEEH_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6;ENST00000471232.5_1_2:32750532-32815924:+|nuORF	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9103881716728	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.768	1	63.725	63.225	64.225	1.9571								0	0	0	0.63775	1	25915	25915		0.45452	0.29519	1				1362	1934	646	652	1830	1830					0.04258339649618392
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	912.5770751833916	1	912.576445	911.569169	1.5498	0.0014143	-0.68844	-0.00062825	0.86135	0.00078605	912.5753382197073	71.433	0.31581	71.433	71.257	71.573	0					24	9	3	0	0	0	0.051699	1	29719	29719		67.344	9.8725	1	1841900			1363	2667	647	653	1831	1831					0.10984716596760791
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.7935058474541	2	456.791861	911.569169	2.0499	0.00093639	3.9343	0.0017972	5.9843	0.0027336	456.7927902230382	70.9	0.31743	71.224	70.987	71.305	0.32359					15	9	2	0	0	0	0.11478	1	29659	29659		44.407	6.2558	1	1288400			1364	2667	647	653	1832	1832					0.10984716596760791
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	911.7833129763603	1	912.576445	911.569169	1.5118	0.0013797	0.12239	0.00011169	1.6342	0.0014913	912.5761320799143	70.931	0.28574	71.254	71.019	71.305	0.32359					20	8	3	0	0	0	0.021906	1	29683	29683		46.021	7.8698	1	1790900			1365	2667	647	653	1833	1833					0.10984716596760791
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	912.5784179568291	1	912.576445	911.569169	2.1564	0.0019679	0.17925	0.00016358	2.3357	0.0021315	912.5764994256457	69.68	0.37719	71.046	70.847	71.224	1.3657					29	11	3	0	0	0	0.006164	3	29213	29213;29252;29294		117.6	24.777	1	9333400			1366	2667	647	653	1834;1835;1836	1834					0.10984716596760791
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5770751833916	1	912.576445	911.569169	1.4057	0.0012828	0.2196	0.0002004	1.6253	0.0014832	912.5767133448304	69.199	0.37051	71.052	70.828	71.199	1.853					30	11	3	0	0	0	0.006164	3	28981	28981;29029;29066		117.6	39.614	1	7734200			1367	2667	647	653	1837;1838;1839	1837					0.10984716596760791
ALTPVVVTL	9	Unmodified	_ALTPVVVTL_					0	0	0		nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7927734255791	2	456.791861	911.569169	1.7382	0.00079398	2.8886	0.0013195	4.6267	0.0021134	456.79261192139876	69.141	0.43439	70.994	70.828	71.262	1.853					29	13	3	0	0	0	0.09539	1	28999	28999		50.855	6.448	1	2873900			1368	2667	647	653	1840	1840					0.10984716596760791
ALTSARTT	8	Unmodified	_ALTSARTT_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	410.3294250369072	2	410.729792	819.445031	2.9403	0.0012077	-1.384	-0.00056846	1.5562	0.00063919	410.7284619233291	101.22	0.17514	101.28	101.15	101.33	0.067009					8	5	2	0	0	0	2.3239	1	42333	42333		0	0	1	794200			1369	1644	648	654	1841	1841					0.028086388292649644
ALTSARTT	8	Unmodified	_ALTSARTT_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	410.729792	819.445031	-0.002947	-1.2104E-06	2.2492	0.00092381	2.2462	0.0009226	410.7297317894809	101.22	0.13736	101.22	101.15	101.29	0	-0.033353	0.0027442	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1591400			1370	1644	648	654							0.028086388292649644
ALTSARTT	8	Unmodified	_ALTSARTT_					0	0	0		ENSG00000108671|ENST00000261712|PSMD11;nc|ENSG00000108671|O00231-2|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	ENSG00000108671|ENST00000261712|PSMD11	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	410.729792	819.445031	3.1758	0.0013044	-2.041	-0.00083829	1.1348	0.00046609	410.72867739746476	101.04	0.17251	101.25	101.12	101.29	0.20527	-0.00074801	-0.00078004	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1530400			1371	1644	648	654							0.028086388292649644
ALTSLLKTV	9	Unmodified	_ALTSLLKTV_					0	0	0		ENST00000565642.5_1_16:71777395-71799448:-|nuORF;AP1G1|p.N739Kfs*28|1|0.05|ENSG00000166747|chr16:71738993-71738994|-/C|frameshift_variant;ENSG00000166747|ENST00000299980|AP1G1;nc|ENSG00000166747|O43747-2|AP1G1	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3040344119072	2	473.302593	944.590633	1.6889	0.00079936	2.8853	0.0013656	4.5742	0.002165	473.30285205342085	50.774	0.42413	52.168	51.862	52.287	1.3938					31	13	4	0	0	0	0.043696	1	21240	21240		72.968	29.11	1	3216800			1372	67	649	655	1842	1842					0.11612101625462401
ALTSLLKTV	9	Unmodified	_ALTSLLKTV_					0	0	0		ENST00000565642.5_1_16:71777395-71799448:-|nuORF;AP1G1|p.N739Kfs*28|1|0.05|ENSG00000166747|chr16:71738993-71738994|-/C|frameshift_variant;ENSG00000166747|ENST00000299980|AP1G1;nc|ENSG00000166747|O43747-2|AP1G1	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	473.302593	944.590633	2.5237	0.0011945	-1.2951	-0.00061299	1.2286	0.0005815	473.30244402615403	51.772	0.19139	51.772	51.631	51.822	0	-0.24706	-0.0022541	NaN	72.968	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	208940			1373	67	649	655							0.11612101625462401
ALTSLLKTV	9	Unmodified	_ALTSLLKTV_					0	0	0		ENST00000565642.5_1_16:71777395-71799448:-|nuORF;AP1G1|p.N739Kfs*28|1|0.05|ENSG00000166747|chr16:71738993-71738994|-/C|frameshift_variant;ENSG00000166747|ENST00000299980|AP1G1;nc|ENSG00000166747|O43747-2|AP1G1	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	473.302593	944.590633	1.8496	0.00087541	2.124	0.0010053	3.9736	0.0018807	473.3031439884444	50.141	0.36312	52.118	51.946	52.31	1.9772	0.09882	0.00098255	NaN	72.968	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2417300			1374	67	649	655							0.11612101625462401
ALTSTTFLVP	10	Unmodified	_ALTSTTFLVP_					0	0	0			REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1049.587084949017	1	1049.58774	1048.58046	1.2747	0.0013379	-1.2884	-0.0013523	-0.013777	-1.4461E-05	1049.58627740453	99.366	0.090225	99.366	99.319	99.409	0					4	2	2	0	0	0	0.38674	1	41589	41589		34.102	5.0209	1	20494000	+		1375	10654	650	656	1843	1843					0.058114939002507526
ALTSTTFLVP	10	Unmodified	_ALTSTTFLVP_					0	0	0			REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.2981445193291	2	525.297507	1048.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.303	1	99.384	98.884	99.884	0.080376								0	0	0	0.64816	1	41576	41576		15.847	0.078963	1		+		1376	10654	650	656	1844	1844					0.058114939002507526
ALTSTTFLVP	10	Unmodified	_ALTSTTFLVP_					0	0	0			REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1049.592822253704	1	1049.58774	1048.58046	3.4678	0.0036398	1.6765	0.0017596	5.1443	0.0053994	1049.589157050081	99.192	0.12276	99.39	99.315	99.438	0.19767					6	3	2	0	0	0	0.25611	1	41761	41761		42.095	9.7891	1	50025000	+		1377	10654	650	656	1845	1845					0.058114939002507526
ALTSTTFLVP	10	Unmodified	_ALTSTTFLVP_					0	0	0			REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3004028201103	2	525.297507	1048.58046	3.4919	0.0018343	2.3855	0.0012531	5.8774	0.0030874	525.2986006377315	99.192	0.12276	99.39	99.315	99.438	0.19767					7	3	3	0	0	0	0.62746	1	41763	41763		21.747	0.87544	1	4877700	+		1378	10654	650	656	1846	1846					0.058114939002507526
ALTSTTFLVP	10	Unmodified	_ALTSTTFLVP_					0	0	0			REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	REV__HFM1|p.F1400Lfs*25|1|0.44|ENSG00000162669|chr1:91262279-91262279|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1049.58774	1048.58046	3.4678	0.0036398	1.6765	0.0017596	5.1443	0.0053994	1049.589157050081	99.192	0.12276	99.39	99.315	99.438	0.19767	0.011838	0.0027311	NaN	42.095	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50025000	+		1379	10654	650	656							0.058114939002507526
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	902.5569946169853	1	902.55571	901.548434	1.6252	0.0014668	-0.4375	-0.00039487	1.1877	0.0010719	902.5551105456873	66.562	0.35198	66.562	66.415	66.767	0					22	10	3	0	0	0	0.03795	1	27753	27753		77.984	13.748	1	1378200			1380	1544	651	657	1847	1847					0.09372126217101595
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	902.5594970583916	1	902.55571	901.548434	1.997	0.0018024	0.4151	0.00037465	2.4121	0.002177	902.5557255174388	66.155	0.31718	66.479	66.305	66.622	0.32449					17	9	2	0	0	0	0.069258	1	27676	27676		60.39	0	1	1458700			1381	1544	651	657	1848	1848					0.09372126217101595
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7832519412041	2	451.781493	901.548434	3.297	0.0014895	-0.43943	-0.00019853	2.8576	0.001291	451.78128084046745	64.902	0.31278	66.3	66.131	66.443	1.3989					17	9	2	0	0	0	0.11478	1	27214	27214		44.407	10.305	1	2522400			1382	1544	651	657	1849	1849					0.09372126217101595
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5577270388603	1	902.55571	901.548434	2.789	0.0025172	-0.50607	-0.00045675	2.2829	0.0020605	902.5554552326445	64.933	0.43932	66.332	66.101	66.54	1.3989					28	13	3	0	0	0	0.031324	1	27237	27237		85.357	18.013	1	5162700			1383	1544	651	657	1850	1850					0.09372126217101595
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5583984255791	1	902.55571	901.548434	2.079	0.0018764	0.5282	0.00047673	2.6072	0.0023532	902.5560433816746	64.441	0.41286	66.369	66.17	66.583	1.928					27	12	3	0	0	0	0.031324	3	27028	26984;27028;27070		85.357	18.013	1	4262000			1384	1544	651	657	1851;1852;1853	1852					0.09372126217101595
ALTSVVVTL	9	Unmodified	_ALTSVVVTL_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	ENST00000473078.1_1_7:92300738-92355023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.7834655642509	2	451.781493	901.548434	2.4671	0.0011146	0.95364	0.00043084	3.4207	0.0015454	451.78186448782867	64.382	0.34801	66.31	66.17	66.518	1.928					17	10	2	0	0	0	0.11478	2	26994	26994;27044		44.407	15.92	1	1562100			1385	1544	651	657	1854;1855	1854					0.09372126217101595
ALVDHLNVGV	10	Unmodified	_ALVDHLNVGV_					0	0	0		nc|ENSG00000135441|P78537-2|BLOC1S1;ENSG00000135441|ENST00000548925|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1402465701103	2	518.792924	1035.57129	2.1929	0.0011376	1.7715	0.00091905	3.9644	0.0020567	518.7947550925052	47.046	0.19043	47.046	46.926	47.117	0					8	5	2	0	0	0	0.12484	1	19652	19652		11.64	4.3511	1	579240			1386	2666	652	658	1856	1856					0.05493145334571636
ALVDHLNVGV	10	Unmodified	_ALVDHLNVGV_					0	0	0		nc|ENSG00000135441|P78537-2|BLOC1S1;ENSG00000135441|ENST00000548925|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1396972537041	2	518.792924	1035.57129	1.9164	0.00099423	1.9338	0.0010033	3.8503	0.0019975	518.7940112748471	46.603	0.25917	46.933	46.764	47.023	0.33034					12	8	2	0	0	0	0.12484	1	19526	19526		11.64	6.4096	1	690220			1387	2666	652	658	1857	1857					0.05493145334571636
ALVDHLNVGV	10	Unmodified	_ALVDHLNVGV_					0	0	0		nc|ENSG00000135441|P78537-2|BLOC1S1;ENSG00000135441|ENST00000548925|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	nc|ENSG00000135441|P78537-2|BLOC1S1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1404296755791	2	518.792924	1035.57129	2.1267	0.0011033	1.8446	0.00095696	3.9713	0.0020603	518.7936973048648	44.635	0.31969	46.595	46.448	46.767	1.9596					20	9	3	0	0	0	0.12475	1	18670	18670		12.532	6.7711	1	2593900			1388	2666	652	658	1858	1858					0.05493145334571636
ALVDIVRSL	9	Unmodified	_ALVDIVRSL_					0	0	0		ENST00000533676.5_1_11:61641288-61643947:-|nuORF;ENSG00000221968|ENST00000278829|FADS3	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2280456423759	2	493.305667	984.596781	1.3125	0.00064748	0.52561	0.00025929	1.8381	0.00090677	493.3065398097096	67.152	0.31051	69.041	68.828	69.139	1.8889					14	9	2	0	0	0	0.10575	1	28139	28139		20.415	2.2796	1	567360			1389	5277	653	659	1859	1859					0.10386619857001733
ALVDIVRSL	9	Unmodified	_ALVDIVRSL_					0	0	0		ENST00000533676.5_1_11:61641288-61643947:-|nuORF;ENSG00000221968|ENST00000278829|FADS3	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	493.305667	984.596781	2.1565	0.0010638	-1.4227	-0.00070182	0.73379	0.00036198	493.3057187790521	68.819	0.15769	69.141	69.031	69.188	0.32224	0.0794	-0.001113	NaN	26.268	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306600			1390	5277	653	659							0.10386619857001733
ALVDIVRSL	9	Unmodified	_ALVDIVRSL_					0	0	0		ENST00000533676.5_1_11:61641288-61643947:-|nuORF;ENSG00000221968|ENST00000278829|FADS3	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	493.305667	984.596781	1.9094	0.00094193	-0.34062	-0.00016803	1.5688	0.0007739	493.30552821728475	67.625	0.33182	69.003	68.85	69.182	1.3778	-0.058927	-4.5414E-05	NaN	26.268	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	867540			1391	5277	653	659							0.10386619857001733
ALVDQLWKL	9	Unmodified	_ALVDQLWKL_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3213989138603	2	543.321317	1084.62808	2.3577	0.001281	0.12862	6.9879E-05	2.4863	0.0013509	543.3209773759851	73.654	0.25656	73.978	73.849	74.105	0.32494					16	7	3	0	0	0	0.32838	1	30831	30831		24.021	8.7721	1	815600			1392	770	654	660	1860	1860					0.08915192891072365
ALVDQLWKL	9	Unmodified	_ALVDQLWKL_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3232299685478	2	543.321317	1084.62808	3.0162	0.0016387	1.0494	0.00057018	4.0656	0.0022089	543.3213788411502	72.627	0.40018	73.957	73.732	74.133	1.3297					27	12	3	0	0	0	0.043696	1	30465	30465		72.968	40.662	1	2576300			1393	770	654	660	1861	1861					0.08915192891072365
ALVDQLWKL	9	Unmodified	_ALVDQLWKL_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3230468630791	2	543.321317	1084.62808	2.7437	0.0014907	-0.20655	-0.00011222	2.5372	0.0013785	543.3209353250421	72.065	0.33221	73.888	73.756	74.088	1.824					20	10	2	0	0	0	0.079895	1	30241	30241		56.177	34.43	1	2773500			1394	770	654	660	1862	1862					0.08915192891072365
ALVDQLWKL	9	Unmodified	_ALVDQLWKL_					0	0	0		ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	543.321317	1084.62808	1.5926	0.00086532	-0.18105	-9.8369E-05	1.4116	0.00076695	543.3210361123522	74.18	0.25557	74.18	74.047	74.302	0	0.1789	-0.00048455	NaN	72.968	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	756140			1395	770	654	660							0.08915192891072365
ALVDTKAVW	9	Unmodified	_ALVDTKAVW_					0	0	0		ENSG00000146350|ENST00000398212|TBC1D32;nc|ENSG00000146350|Q96NH3-4|TBC1D32	ENSG00000146350|ENST00000398212|TBC1D32	ENSG00000146350|ENST00000398212|TBC1D32	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.7824890017509	2	501.784567	1001.55458	1.6227	0.00081423	2.0234	0.0010153	3.6461	0.0018296	501.786602342569	39.482	0.43484	39.482	39.265	39.7	0					40	13	4	0	0	0	0.63129	1	16615	16615		10.074	2.7847	1	7596400			1396	3147	655	661	1863	1863					0.05386644448617517
ALVEKTLWL	9	Unmodified	_ALVEKTLWL_					0	0	0		ARID4B-GNPAT|1|fusion;nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT;ENST00000492459.1_1_1:231402025-231403654:+|nuORF	ARID4B-GNPAT|1|fusion	ARID4B-GNPAT|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.2890502810478	2	536.823692	1071.63283	2.6059	0.0013989	2.6839	0.0014408	5.2897	0.0028397	536.8253918825254	59.218	0.39748	60.638	60.497	60.895	1.4196					18	12	2	0	0	0	0.098208	1	24844	24844		24.021	9.1823	1	1599400			1397	78	656	662	1864	1864					0.09988077033858644
ALVESLITV	9	Unmodified	_ALVESLITV_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7879211306572	2	472.786776	943.558998	2.7185	0.0012853	0.058092	2.7465E-05	2.7766	0.0013128	472.7866050647371	72.517	0.40652	72.842	72.579	72.986	0.32494					30	12	3	0	0	0	0.087207	1	30352	30352		53.576	5.2297	1	2114700			1398	4926	657	663	1865	1865					0.0849610887153176
ALVESLITV	9	Unmodified	_ALVESLITV_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7878906130791	2	472.786776	943.558998	2.36	0.0011158	0.44338	0.00020962	2.8034	0.0013254	472.78685893445794	71.308	0.4221	72.649	72.451	72.873	1.3415					31	13	3	0	0	0	0.022807	1	29959	29959		97.075	11.718	1	5784700			1399	4926	657	663	1866	1866					0.0849610887153176
ALVESLITV	9	Unmodified	_ALVESLITV_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7884094119072	2	472.786776	943.558998	1.1905	0.00056286	1.9955	0.00094347	3.1861	0.0015063	472.7876576969423	70.829	0.42188	72.667	72.472	72.894	1.8378					31	13	3	0	0	0	0.046276	1	29734	29734		70.716	0	1	7512100			1400	4926	657	663	1867	1867					0.0849610887153176
ALVESLITV	9	Unmodified	_ALVESLITV_					0	0	0		ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	ENSG00000196233|ENST00000421806|LCOR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	472.786776	943.558998	2.2767	0.0010764	-0.80544	-0.0003808	1.4712	0.00069558	472.7863144381675	72.955	0.34308	72.955	72.778	73.121	0	0.17658	-0.0012292	NaN	97.075	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2246100			1401	4926	657	663							0.0849610887153176
ALVESQYTR	9	Unmodified	_ALVESQYTR_					0	0	0			REV__nc|ENSG00000145623|Q99650-2|OSMR	REV__nc|ENSG00000145623|Q99650-2|OSMR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.7800781130791	2	533.780013	1065.54547	0.77156	0.00041184	-0.25208	-0.00013455	0.51948	0.00027729	533.7797612205995	19.222	0.31027	19.222	19.045	19.356	0					29	9	4	0	0	0	0.27148	2	7976	7976;8027		26.884	2.3073	1	8744000	+		1402	10276	658	664	1868;1869	1868					0.015322510922715082
ALVFLVWLF	9	Unmodified	_ALVFLVWLF_					0	0	0			REV__nc|ENSG00000168398|P30411-2|BDKRB2	REV__nc|ENSG00000168398|P30411-2|BDKRB2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	553.8314697146416	2	554.333696	1106.65284	1.9559	0.0010842	-2.2497	-0.0012471	-0.29379	-0.00016286	554.3330150931383	69.127	0.68364	70.493	70.413	71.096	1.3657					29	22	2	0	0	0	0.11109	1	29117	29117		5.2307	0	1	1362300	+		1403	10908	659	665	1870	1870					0.10377872764456697
ALVFSSYAV	9	Unmodified	_ALVFSSYAV_					0	0	0		OR56B4|p.D216Y|1|0.36|ENSG00000180919|chr11:6108424-6108424|G/T|missense_variant;ENSG00000180919|ENST00000316529|OR56B4	OR56B4|p.D216Y|1|0.36|ENSG00000180919|chr11:6108424-6108424|G/T|missense_variant	OR56B4|p.D216Y|1|0.36|ENSG00000180919|chr11:6108424-6108424|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7567932009697	2	478.758018	955.501483	1.7646	0.00084483	-2.5024	-0.001198	-0.73773	-0.0003532	478.75672519601585	67.634	0.40517	69.504	69.299	69.704	1.87					38	12	4	0	0	0	0.1735	1	28332	28332		36.044	3.7387	1	15563000			1404	4562	660	666	1871	1871					0.021952666659558417
ALVKKLKKKKG	11	Unmodified	_ALVKKLKKKKG_					0	0	0		ENSG00000170365|ENST00000302085|SMAD1;ENSG00000113658|ENST00000545279|SMAD5	ENSG00000170365|ENST00000302085|SMAD1	ENSG00000170365|ENST00000302085|SMAD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	414.2982665896416	3	414.299097	1239.87546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.06	1	110.11	109.61	110.61	0.048843								0	0	0	0.63775	1	47497	47497		0.094841	0.094841	1				1405	1836	661	667	1872	1872					0.26511946829668886
ALVLGAVNV	9	Unmodified	_ALVLGAVNV_					0	0	0			REV__ENST00000503183.1_1_5:137848440-137853282:-|nuORF	REV__ENST00000503183.1_1_5:137848440-137853282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	855.5328857302666	1	855.52983	854.522553	3.3282	0.0028474	-0.19933	-0.00017054	3.1289	0.0026769	855.5296093991801	73.225	0.3479	74.555	74.412	74.76	1.3298					22	10	3	0	0	0	0.061246	1	30726	30726		63.563	0	1	2114300	+		1406	9577	662	668	1873	1873					0.0894727676546836
ALVLGAVNV	9	Unmodified	_ALVLGAVNV_					0	0	0			REV__ENST00000503183.1_1_5:137848440-137853282:-|nuORF	REV__ENST00000503183.1_1_5:137848440-137853282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	855.5311157107353	1	855.52983	854.522553	2.5018	0.0021404	-0.07667	-6.5594E-05	2.4251	0.0020748	855.5294831118271	72.746	0.35008	74.556	74.353	74.703	1.8101					25	10	3	0	0	0	0.087207	1	30537	30537		53.576	0	1	1987100	+		1407	9577	662	668	1874	1874					0.0894727676546836
ALVLPTPYL	9	Unmodified	_ALVLPTPYL_					0	0	0		ENST00000429243.6_1_12:53839881-53840088:+|nuORF	ENST00000429243.6_1_12:53839881-53840088:+|nuORF	ENST00000429243.6_1_12:53839881-53840088:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8084594607353	2	493.799686	985.584819	4.7656	0.0023533	1.4882	0.00073486	6.2538	0.0030881	493.800279458403	87.637	0.74863	88.729	88.304	89.052	1.0918					71	23	4	0	0	0	0.39097	1	36889	36889		20.871	6.2895	1	10355000			1408	6487	663	669	1875	1875					0.09145003113803796
ALVPLGVGARV	11	Unmodified	_ALVPLGVGARV_					0	0	0		ENST00000573341.5_1_17:45177297-45177612:-|nuORF	ENST00000573341.5_1_17:45177297-45177612:-|nuORF	ENST00000573341.5_1_17:45177297-45177612:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3365966677666	2	526.334759	1050.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.168	1	76.168	75.668	76.668	0								0	0	0	0.63775	1	31706	31706		6.2058	0	1				1409	7400	664	670	1876	1876					0.13166301502269562
ALVRLKPW	8	Unmodified	_ALVRLKPW_					0	0	0			REV__ATP2B3|p.K912Qfs*72|1|0.12|ENSG00000067842|chrX:153559836-153559837|-/C|frameshift_variant;REV__nc|ENSG00000070961|P20020-6|ATP2B1	REV__nc|ENSG00000070961|P20020-6|ATP2B1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2111999392509	3	328.2114	981.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.409	1	98.409	97.909	98.909	0								0	0	0	1.0178	1	41151	41151		0.45834	0	1		+		1410	8149;8722	665	671	1877	1877					0.12082951164700262
ALVRSFITF	9	Unmodified	_ALVRSFITF_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.2490722537041	2	527.30821	1052.60187	2.7838	0.0014679	0.2139	0.00011279	2.9977	0.0015807	527.3086361179288	64.146	0.27622	65.553	65.433	65.71	1.4071					11	8	2	0	0	0	0.080611	1	26919	26919		21.537	1.0834	1	451030	+		1411	9065	666	672	1878	1878					0.07766923719600527
ALVSALMLG	9	Unmodified	_ALVSALMLG_					0	0	0			REV__tr|A0A553SRB4|A0A553SRB4_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00725PE=4SV=1	REV__tr|A0A553SRB4|A0A553SRB4_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00725PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7586547732353	2	437.756964	873.499375	2.7876	0.0012203	-0.33351	-0.000146	2.454	0.0010743	437.7568934327542	76.92	0.37826	78.214	78.045	78.423	1.2938					27	11	3	0	0	0	0.3154	1	32349	32349		24.674	0	1	3531300	+		1412	15153	667	673	1879	1879					0.057565146565025316
ALVSFRRL	8	Unmodified	_ALVSFRRL_					0	0	0		ENST00000460804.5_1_1:21050644-21051119:-|nuORF;nc|ENSG00000189410|Q6ZV89-2|SH2D5;ENSG00000189410|ENST00000444387|SH2D5	ENST00000460804.5_1_1:21050644-21051119:-|nuORF	ENST00000460804.5_1_1:21050644-21051119:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.3009216189384	2	481.300719	960.586885	2.1959	0.0010569	-1.2241	-0.00058915	0.97188	0.00046777	481.300533389062	76.67	0.35335	78.437	78.222	78.576	1.7672					23	10	3	0	0	0	0.87655	1	32119	32119		11.114	0.93107	1	3178600			1413	4907	668	674	1880	1880					0.10501476642286889
ALVSKKEMI	9	Unmodified	_ALVSKKEMI_					0	0	0		tr|A0A553SPQ8|A0A553SPQ8_NIACIZincABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_26800PE=3SV=1	tr|A0A553SPQ8|A0A553SPQ8_NIACIZincABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_26800PE=3SV=1	tr|A0A553SPQ8|A0A553SPQ8_NIACIZincABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_26800PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8050720095634	2	509.801903	1017.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.043	1	68.043	67.543	68.543	0								0	0	0	0.40188	1	28338	28338		8.5933	0	1				1414	16479	669	675	1881	1881					0.08116144265068215
ALVSNLYVI	9	Unmodified	_ALVSNLYVI_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENST00000466451.1_1_10:12199921-12200143:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2959777712822	2	496.294768	990.574983	2.783	0.0013812	0.41769	0.0002073	3.2007	0.0015885	496.2946825414365	73.062	0.22064	73.387	73.244	73.464	0.32494					11	6	2	0	0	0	0.3154	1	30546	30546		24.674	12.142	1	670370			1415	733;793	670	676	1882	1882					0.07931815108440787
ALVSSLHLL	9	Unmodified	_ALVSSLHLL_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.7965576052666	2	476.794935	951.575317	2.6048	0.001242	0.38744	0.00018473	2.9922	0.0014267	476.79503749268895	59.213	0.30405	60.633	60.527	60.831	1.4196					23	9	3	0	0	0	0.10722	1	24832	24832		46.921	16.696	1	9532500			1416	4586	671	677	1883	1883					0.09759234828288754
ALVSSLHLL	9	Unmodified	_ALVSSLHLL_					0	0	0		ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	ENSG00000181789|ENST00000314797|COPG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	476.7960998415947	2	476.794935	951.575317	2.2389	0.0010675	-0.05355	-2.5532E-05	2.1853	0.0010419	476.7948853538688	58.711	0.29993	60.68	60.544	60.844	1.969					24	9	3	0	0	0	0.15478	1	24637	24637		38.151	11.268	1	9046900			1417	4586	671	677	1884	1884					0.09759234828288754
ALVTSHSEL	9	Unmodified	_ALVTSHSEL_					0	0	0			REV__nc|ENSG00000126001|Q9BV73-2|CEP250	REV__nc|ENSG00000126001|Q9BV73-2|CEP250	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7579223513603	2	478.756007	955.497461	1.7646	0.00084483	1.6989	0.00081335	3.4635	0.0016582	478.75672519601585	67.634	0.40517	69.504	69.299	69.704	1.87					38	12	4	0	0	0	0.44535	1	28434	28434		18.135	0	1	15563000	+		1418	9690	672	678	1885	1885					0.01793177172248761
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	899.5209838747978	1	899.519659	898.512382	1.7214	0.0015484	1.7251	0.0015518	3.4465	0.0031002	899.5204837203146	43.318	0.30724	43.318	43.119	43.427	0					12	9	2	0	0	0	0.031324	1	18144	18144		85.357	3.4927	1	1002500			1419	7647	673	679	1886	1886					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2645446658134	2	450.263468	898.512382	1.7063	0.00076826	1.458	0.00065649	3.1643	0.0014248	450.26395127622516	43.315	0.40369	43.315	43.119	43.523	0					25	12	3	0	0	0	0.15478	1	18156	18156		38.151	7.9264	1	1925000			1420	7647	673	679	1887	1887					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2637206912041	2	450.263468	898.512382	2.3274	0.001048	-0.16714	-7.5258E-05	2.1603	0.0009727	450.2635163335848	42.92	0.34921	43.244	43.066	43.416	0.32389					17	11	2	0	0	0	0.1735	1	18007	18007		36.044	3.7387	1	1559600			1421	7647	673	679	1888	1888					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2646972537041	2	450.263468	898.512382	2.4492	0.0011028	0.17307	7.7928E-05	2.6223	0.0011807	450.26353986702196	41.433	0.51146	42.758	42.524	43.035	1.3254					33	15	3	0	0	0	0.046276	1	17352	17352		70.716	6.4792	1	4748900			1422	7647	673	679	1889	1889					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	899.5211669802666	1	899.519659	898.512382	1.9754	0.0017769	0.41373	0.00037216	2.3891	0.002149	899.5198634141199	41.439	0.38438	42.765	42.556	42.94	1.3255					29	11	3	0	0	0	0.01454	1	17377	17377		103.75	14.321	1	4401200			1423	7647	673	679	1890	1890					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2648803591728	2	450.263468	898.512382	2.1984	0.00098984	0.56418	0.00025403	2.7625	0.0012439	450.26373774176386	41.009	0.38266	42.902	42.736	43.119	1.8927					27	11	3	0	0	0	0.069258	2	17194	17151;17194		60.39	6.814	1	7814700			1424	7647	673	679	1891;1892	1892					0.05906669040234647
ALVVQVAEA	9	Unmodified	_ALVVQVAEA_					0	0	0		HEXB-UBA6|1|fusion;ENST00000515528.1_1_5:73981085-73985366:+|nuORF;ENST00000513079.5_1_5:73981085-74001232:+|nuORF;ENSG00000049860|ENST00000261416|HEXB	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	899.5211059451103	1	899.519659	898.512382	1.8519	0.0016658	1.0815	0.00097287	2.9335	0.0026387	899.5203205673213	41.014	0.41411	42.906	42.705	43.119	1.8927					26	12	3	0	0	0	0.013238	2	17159	17159;17206		104.8	3.7072	1	3623100			1425	7647	673	679	1893;1894	1893					0.05906669040234647
ALWDIMRCWV	10	Unmodified	_ALWDIMRCWV_					0	0	0		ENST00000585435.5_1_19:13218480-13220441:-|nuORF	ENST00000585435.5_1_19:13218480-13220441:-|nuORF	ENST00000585435.5_1_19:13218480-13220441:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	646.8171874880791	2	646.817561	1291.62057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.019	1	66.344	65.844	66.844	0.32449								0	0	0	0.66008	1	27641	27641		4.3292	0.73274	1				1426	7449	674	680	1895	1895					-0.01357605972498277
ALWDKLFNL	9	Unmodified	_ALWDKLFNL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3147460818291	2	560.313492	1118.61243	2.0749	0.0011626	0.96238	0.00053924	3.0373	0.0017018	560.3137781026419	87.895	0.50884	87.895	87.671	88.18	0					51	16	4	0	0	0	0.0069529	4	36767	36685;36727;36767;36811		114.65	59.876	1	14962000			1427	716	675	681	1896;1897;1898;1899	1898					0.057869063740326965
ALWDKLFNL	9	Unmodified	_ALWDKLFNL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3153564333916	2	560.313492	1118.61243	2.5188	0.0014113	1.0355	0.00058018	3.5542	0.0019915	560.3138965499269	87.444	0.79282	87.688	87.412	88.205	0.24387					66	25	4	0	0	0	0.00020031	4	36658	36614;36658;36714;36781		142.08	67.151	1	11714000			1428	716	675	681	1900;1901;1902;1903	1901					0.057869063740326965
ALWDKLFNL	9	Unmodified	_ALWDKLFNL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3138915896416	2	560.313492	1118.61243	3.5824	0.0020073	-1.0238	-0.00057363	2.5586	0.0014336	560.3125961333058	86.553	0.44694	87.68	87.487	87.934	1.1265					52	16	4	0	0	0	0.0022704	3	36432	36432;36479;36536		129.77	74.999	1	22698000			1429	716	675	681	1904;1905;1906	1904					0.057869063740326965
ALWDKLFNL	9	Unmodified	_ALWDKLFNL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3138305544853	2	560.313492	1118.61243	3.8988	0.0021846	-1.9849	-0.0011122	1.914	0.0010724	560.3118665960155	86.109	0.43954	87.656	87.49	87.929	1.547					54	16	5	0	0	0	5.27E-05	2	36238	36238;36296		149.91	87.341	1	20584000			1430	716	675	681	1907;1908	1907					0.057869063740326965
ALWDWFNEMSD	11	Unmodified	_ALWDWFNEMSD_					0	0	0			REV__ENSG00000144227|ENST00000272641|NXPH2	REV__ENSG00000144227|ENST00000272641|NXPH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.2952148318291	2	707.292627	1412.5707	2.0471	0.0014479	0.16441	0.00011628	2.2115	0.0015641	707.2917064553508	64.949	0.28671	64.949	64.817	65.104	0					14	8	2	0	0	0	1.0084	1	27084	27084		3.2813	1.4371	1	766580	+		1431	10237	676	682	1909	1909					-0.11908062167481148
ALWDWFNEMSD	11	Unmodified	_ALWDWFNEMSD_					0	0	0			REV__ENSG00000144227|ENST00000272641|NXPH2	REV__ENSG00000144227|ENST00000272641|NXPH2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	707.292627	1412.5707	2.0471	0.0014479	0.16441	0.00011628	2.2115	0.0015641	707.2917064553508	64.949	0.28671	64.949	64.817	65.104	0	0.0093761	-0.0011729	NaN	3.2813	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	766580	+		1432	10237	676	682							-0.11908062167481148
ALWDWFNEMSD	11	Unmodified	_ALWDWFNEMSD_					0	0	0			REV__ENSG00000144227|ENST00000272641|NXPH2	REV__ENSG00000144227|ENST00000272641|NXPH2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	707.292627	1412.5707	1.8625	0.0013173	2.0867	0.0014759	3.9492	0.0027932	707.2928053365963	64.603	0.22081	64.93	64.786	65.007	0.327	-0.0093761	0.0015463	NaN	3.2813	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	697440	+		1433	10237	676	682							-0.11908062167481148
ALWGFFPVL	9	Unmodified	_ALWGFFPVL_					0	0	0		ENSG00000134153|ENST00000256545|EMC7	ENSG00000134153|ENST00000256545|EMC7	ENSG00000134153|ENST00000256545|EMC7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2965576052666	2	525.294571	1048.57459	1.3935	0.000732	1.4987	0.00078723	2.8922	0.0015192	525.2956038269737	99.366	0.090225	99.366	99.319	99.409	0					4	2	2	0	0	0	0.051525	1	41593	41593		67.413	35.108	1	5242000			1434	2596	677	683	1910	1910					0.05224440179222256
ALWGGTQPLL	10	Unmodified	_ALWGGTQPLL_					0	0	0		TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant;ENST00000487174.1_1_1:32683125-32687629:-|nuORF;nc|ENSG00000160055|Q8WY98-4|TMEM234;ENSG00000160055|ENST00000309777|TMEM234;nc|ENSG00000160055|Q8WY98|TMEM234;nc|ENSG00000160055|Q8WY98-2|TMEM234	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.2977172732353	2	528.297842	1054.58113	2.7021	0.0014275	-2.3875	-0.0012613	0.31462	0.00016621	528.2959792325314	74.295	0.3158	74.619	74.455	74.77	0.32464					12	9	2	0	0	0	0.75645	1	31076	31076		15.847	3.3156	1	418630			1435	3541	678	684	1911	1911					0.05602333339948018
ALWGGTQPLL	10	Unmodified	_ALWGGTQPLL_					0	0	0		TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant;ENST00000487174.1_1_1:32683125-32687629:-|nuORF;nc|ENSG00000160055|Q8WY98-4|TMEM234;ENSG00000160055|ENST00000309777|TMEM234;nc|ENSG00000160055|Q8WY98|TMEM234;nc|ENSG00000160055|Q8WY98-2|TMEM234	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	528.297842	1054.58113	1.9499	0.0010301	2.5661	0.0013557	4.516	0.0023858	528.2995039233804	74.794	0.21968	74.794	74.653	74.872	0	0.15243	0.0038729	NaN	15.847	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420780			1436	3541	678	684							0.05602333339948018
ALWGGTQPLL	10	Unmodified	_ALWGGTQPLL_					0	0	0		TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant;ENST00000487174.1_1_1:32683125-32687629:-|nuORF;nc|ENSG00000160055|Q8WY98-4|TMEM234;ENSG00000160055|ENST00000309777|TMEM234;nc|ENSG00000160055|Q8WY98|TMEM234;nc|ENSG00000160055|Q8WY98-2|TMEM234	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	528.297842	1054.58113	3.4992	0.0018486	-4.1528	-0.0021939	-0.65367	-0.00034533	528.2951762724738	73.181	0.15642	74.511	74.381	74.537	1.3297	-0.13037	-0.0032264	NaN	15.847	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	723320			1437	3541	678	684							0.05602333339948018
ALWNEEALL	9	Unmodified	_ALWNEEALL_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1058.554736316204	1	1058.55169	1057.54441	1.9092	0.002021	1.6612	0.0017584	3.5704	0.0037794	1058.5533674808933	75.739	0.22334	75.739	75.66	75.884	0					12	6	3	0	0	0	0.073578	1	31539	31539		58.679	18.23	1	897080			1438	3052	679	685	1912	1912					0.017940367233904908
ALWNEEALL	9	Unmodified	_ALWNEEALL_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1058.555712878704	1	1058.55169	1057.54441	3.8737	0.0041005	-0.49313	-0.00052201	3.3806	0.0035785	1058.5510892477655	74.288	0.30142	75.606	75.438	75.739	1.318					17	9	2	0	0	0	0.018723	1	31171	31171		100.37	46.539	1	2160700			1439	3052	679	685	1913	1913					0.017940367233904908
ALWNEEALL	9	Unmodified	_ALWNEEALL_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1058.554248034954	1	1058.55169	1057.54441	3.6732	0.0038883	-1.7028	-0.0018025	1.9705	0.0020858	1058.55038282423	73.756	0.33929	75.552	75.409	75.748	1.7962					17	10	2	0	0	0	0.037761	2	30970	30923;30970		78.149	26.52	1	2280700			1440	3052	679	685	1914;1915	1915					0.017940367233904908
ALWNEEALL	9	Unmodified	_ALWNEEALL_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000424022.2_1_1:225594357-225599062:-|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1058.55169	1057.54441	3.0916	0.0032726	-0.46411	-0.00049128	2.6275	0.0027814	1058.5489676392876	75.329	0.34946	75.653	75.458	75.807	0.32464	0.015688	0.00030607	NaN	100.37	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	912880			1441	3052	679	685							0.017940367233904908
ALWTGMHTI	9	Unmodified	_ALWTGMHTI_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;ANKFY1-SPINT2|1|fusion;nc|ENSG00000185722|Q9P2R3-4|ANKFY1;ANKFY1-SPINT2|2|fusion	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.2640869021416	2	515.262945	1028.51134	2.2371	0.0011527	1.1506	0.00059287	3.3877	0.0017456	515.263845458056	50.789	0.28604	50.789	50.564	50.85	0					18	8	3	0	0	0	0.09539	1	21155	21155		50.855	26.181	1	965010			1442	63	680	686	1916	1916					-0.0017786860032629193
ALWTGMHTI	9	Unmodified	_ALWTGMHTI_					0	0	0		ENSG00000185722|ENST00000341657|ANKFY1;nc|ENSG00000185722|Q9P2R3-2|ANKFY1;ANKFY1-SPINT2|1|fusion;nc|ENSG00000185722|Q9P2R3-4|ANKFY1;ANKFY1-SPINT2|2|fusion	ENSG00000185722|ENST00000341657|ANKFY1	ENSG00000185722|ENST00000341657|ANKFY1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	515.262945	1028.51134	1.881	0.0009692	0.83675	0.00043115	2.7177	0.0014004	515.2635054135685	50.19	0.28067	50.518	50.356	50.637	0.32824	-0.13529	-0.00017338	NaN	50.855	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1291200			1443	63	680	686							-0.0017786860032629193
ALWTLALI	8	Unmodified	_ALWTLALI_					0	0	0		tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.7828857302666	2	450.781296	899.54804	1.8016	0.00081215	0.90694	0.00040883	2.7086	0.001221	450.7815383592402	93.568	0.3505	93.568	93.422	93.773	0					22	10	3	0	0	0	0.66111	1	39102	39102		34.187	0	1	1538600			1444	16926	681	687	1917	1917					0.09424751287883737
ALWTLALI	8	Unmodified	_ALWTLALI_					0	0	0		tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	900.5596191287041	1	900.555316	899.54804	3.8832	0.003497	-0.38765	-0.0003491	3.4955	0.0031479	900.555278630938	92.24	0.41861	93.176	92.923	93.342	0.93624					27	12	3	0	0	0	0.34339	2	38805	38805;38844		67.035	0	1	6481200			1445	16926	681	687	1918;1919	1918					0.09424751287883737
ALWTLALI	8	Unmodified	_ALWTLALI_					0	0	0		tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	tr|A0A7D6VTP4|A0A7D6VTP4_9CLOTPhosphatetransportsystempermeaseproteinOS=ClostridiumintestinaleOX=36845GN=pstCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	900.5565673708916	1	900.555316	899.54804	3.0981	0.00279	1.4032	0.0012637	4.5013	0.0040536	900.5567166526139	91.73	0.35277	93.057	92.86	93.213	1.3269					21	10	3	0	0	0	0.34339	2	38603	38603;38660		67.035	0	1	5676200			1446	16926	681	687	1920;1921	1920					0.09424751287883737
ALYFFQAL	8	Unmodified	_ALYFFQAL_					0	0	0		tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7631408572197	2	486.763104	971.511654	2.0536	0.00099959	-2.5362	-0.0012345	-0.48264	-0.00023493	486.7620607064491	59.937	0.2907	59.937	59.807	60.097	0					19	9	3	0	0	0	0.86202	1	25034	25034		15.768	0.92995	1	2523400			1447	17332	682	688	1922	1922					0.024758743911888814
ALYFFQAL	8	Unmodified	_ALYFFQAL_					0	0	0		tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	tr|A0A7D7ADY5|A0A7D7ADY5_9CLOTDUF2975domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00790PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7650329470634	2	486.763104	971.511654	3.1225	0.0015199	-1.8733	-0.00091185	1.2492	0.00060806	486.7626203277013	59.423	0.27689	59.749	59.624	59.901	0.32554					20	8	3	0	0	0	0.86202	1	24938	24938		15.768	0.92995	1	1605300			1448	17332	682	688	1923	1923					0.024758743911888814
ALYNWLIQV	9	Unmodified	_ALYNWLIQV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3138305544853	2	560.313492	1118.61243	1.6054	0.00089953	0.99076	0.00055514	2.5962	0.0014547	560.3136995747572	91.962	0.34663	91.962	91.787	92.134	0					19	10	2	0	0	0	0.44535	1	38414	38414		18.135	6.4947	1	775330			1449	1828	683	689	1924	1924					0.057869063740326965
ALYNWLIQV	9	Unmodified	_ALYNWLIQV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3141967654228	2	560.313492	1118.61243	2.5745	0.0014425	0.0068566	3.8419E-06	2.5813	0.0014463	560.3134418671996	91.481	0.2897	91.672	91.529	91.819	0.19041					16	8	2	0	0	0	0.15478	1	38327	38327		38.151	9.6643	1	555840			1450	1828	683	689	1925	1925					0.057869063740326965
ALYNWLIQV	9	Unmodified	_ALYNWLIQV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3158447146416	2	560.313492	1118.61243	4.1917	0.0023487	0.44479	0.00024922	4.6365	0.0025979	560.3136574691474	90.677	0.31864	91.659	91.462	91.781	0.98157					16	9	2	0	0	0	0.3154	1	38201	38201		24.674	7.7316	1	1072400			1451	1828	683	689	1926	1926					0.057869063740326965
ALYNWLIQV	9	Unmodified	_ALYNWLIQV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3160888552666	2	560.313492	1118.61243	4.0478	0.002268	0.82706	0.00046341	4.8749	0.0027314	560.313899837605	90.196	0.28046	91.601	91.46	91.74	1.4045					18	8	3	0	0	0	0.087207	2	37979	37979;38042		53.576	11.481	1	1138800			1452	1828	683	689	1927;1928	1927					0.057869063740326965
ALYPNVVQV	9	Unmodified	_ALYPNVVQV_					0	0	0		ENSG00000163214|ENST00000457308|DHX57;ENST00000497514.2_1_2:39033679-39046075:-|nuORF	ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.7826415896416	2	501.784567	1001.55458	2.8065	0.0014083	-4.3488	-0.0021822	-1.5423	-0.00077388	501.7824113640179	56.975	0.19987	57.296	57.168	57.368	0.32103					14	8	2	0	0	0	0.09539	1	23890	23890		50.855	16.753	1	1595800			1453	3668	684	690	1929	1929					0.05386644448617517
ALYPNVVQV	9	Unmodified	_ALYPNVVQV_					0	0	0		ENSG00000163214|ENST00000457308|DHX57;ENST00000497514.2_1_2:39033679-39046075:-|nuORF	ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.7837707400322	2	501.784567	1001.55458	0.65784	0.00033009	-0.14384	-7.2178E-05	0.51399	0.00025791	501.7842891734322	55.892	0.17133	57.302	57.228	57.399	1.4099					15	10	2	0	0	0	0.042029	1	23426	23426		74.423	19.649	1	8133500			1454	3668	684	690	1930	1930					0.05386644448617517
ALYPNVVQV	9	Unmodified	_ALYPNVVQV_					0	0	0		ENSG00000163214|ENST00000457308|DHX57;ENST00000497514.2_1_2:39033679-39046075:-|nuORF	ENSG00000163214|ENST00000457308|DHX57	ENSG00000163214|ENST00000457308|DHX57	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7845031619072	2	501.784567	1001.55458	-0.0044483	-2.2321E-06	-0.09147	-4.5898E-05	-0.095918	-4.813E-05	501.7846867074787	55.399	0.22206	57.367	57.233	57.455	1.9684					18	12	2	0	0	0	0.031324	1	23227	23227		85.357	21.12	1	6587000			1455	3668	684	690	1931	1931					0.05386644448617517
ALYTVIETV	9	Unmodified	_ALYTVIETV_					0	0	0		nc|ENSG00000165476|Q6NUK4-2|REEP3;ENSG00000165476|ENST00000373758|REEP3	nc|ENSG00000165476|Q6NUK4-2|REEP3	nc|ENSG00000165476|Q6NUK4-2|REEP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7869445681572	2	504.784233	1007.55391	3.1753	0.0016028	1.4563	0.00073513	4.6316	0.002338	504.7853221591523	63.013	0.43726	64.427	64.254	64.691	1.4134					25	10	3	0	0	0	0.3154	1	26460	26460		24.674	2.9272	1	3110900			1456	3842	685	691	1932	1932					0.05043805008904201
ALYVAVVNV	9	Unmodified	_ALYVAVVNV_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	947.5591918826103	1	947.556044	946.548768	2.3918	0.0022664	-0.50121	-0.00047492	1.8906	0.0017915	947.5559069455769	63.188	0.34611	64.602	64.439	64.785	1.4134					23	10	3	0	0	0	0.037423	2	26537	26487;26537		78.445	28.776	1	2369100			1457	1534	686	692	1933;1934	1934					0.07335545936950894
ALYVAVVNV	9	Unmodified	_ALYVAVVNV_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	947.5577880740166	1	947.556044	946.548768	2.8812	0.0027301	-0.78522	-0.00074404	2.0959	0.001986	947.5552708645916	62.662	0.40664	64.606	64.438	64.845	1.9444					26	12	3	0	0	0	0.052478	1	26277	26277		67.035	17.366	1	2490900			1458	1534	686	692	1935	1935					0.07335545936950894
ALYVAVVNV	9	Unmodified	_ALYVAVVNV_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	947.556044	946.548768	1.8084	0.0017136	0.054213	5.137E-05	1.8626	0.001765	947.556715499296	64.844	0.31836	64.844	64.69	65.008	0	0.15136	0.00058703	NaN	78.445	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1344400			1459	1534	686	692							0.07335545936950894
ALYVAVVNV	9	Unmodified	_ALYVAVVNV_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	947.556044	946.548768	1.9445	0.0018425	-0.91007	-0.00086234	1.0344	0.00098015	947.5554037477159	64.389	0.3559	64.718	64.593	64.949	0.32899	0.025333	-0.00032668	NaN	78.445	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1219000			1460	1534	686	692							0.07335545936950894
AMAEMVLQV	9	Unmodified	_AMAEMVLQV_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2516662478447	2	496.251188	990.487824	2.9045	0.0014414	-3.324	-0.0016495	-0.41948	-0.00020817	496.24925307802545	62.628	0.56916	64.041	63.775	64.344	1.4134					35	18	3	0	0	0	0.069258	2	26229	26229;26279		60.39	26.287	1	2572500			1461	549	687	693	1936;1937	1936					-0.007800504291594734
AMAEMVLQV	9	Unmodified	_AMAEMVLQV_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2501098513603	2	496.251188	990.487824	2.9968	0.0014872	-3.3271	-0.0016511	-0.33035	-0.00016394	496.2489739824584	62.074	0.51209	64.031	63.815	64.328	1.9571					29	16	3	0	0	0	0.09539	1	26043	26043		50.855	16.753	1	1381600			1462	549	687	693	1938	1938					-0.007800504291594734
AMASIINRL	9	Unmodified	_AMASIINRL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7866699099541	2	494.784044	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.322	1	47.282	46.782	47.782	1.9596								0	0	0	0.091705	1	18991	18991		36.127	15.673	1				1463	1975	688	694	1939	1939					0.05926106808044551
AMFDHIPVGV	10	Unmodified	_AMFDHIPVGV_					0	0	0		ENST00000487704.5_1_22:32797732-32808215:-|nuORF;ENSG00000100220|ENST00000216038|RTCB	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2739745974541	2	543.276052	1084.53755	1.1128	0.00060456	-0.47609	-0.00025865	0.63672	0.00034592	543.2755264365319	58.569	0.28389	59.987	59.815	60.099	1.4181					16	8	3	0	0	0	0.15278	1	24537	24537		54.774	31.625	1	2711400			1464	1254	689	695	1940	1940					-0.0013359942884108023
AMFDHIPVGV	10	Unmodified	_AMFDHIPVGV_					0	0	0		ENST00000487704.5_1_22:32797732-32808215:-|nuORF;ENSG00000100220|ENST00000216038|RTCB	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2742797732353	2	543.276052	1084.53755	0.87413	0.00047489	-1.6361	-0.00088883	-0.76193	-0.00041394	543.2748226277611	58.051	0.24206	60.02	59.842	60.084	1.969					13	7	2	0	0	0	0.15278	1	24340	24340		54.774	34.359	1	2641500			1465	1254	689	695	1941	1941					-0.0013359942884108023
AMFDHIPVGV	10	Unmodified	_AMFDHIPVGV_					0	0	0		ENST00000487704.5_1_22:32797732-32808215:-|nuORF;ENSG00000100220|ENST00000216038|RTCB	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	543.276052	1084.53755	1.8828	0.0010229	1.4168	0.00076969	3.2995	0.0017926	543.2770425760523	60.263	0.18067	60.263	60.199	60.38	0	0.19563	0.0012288	NaN	54.774	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508840			1466	1254	689	695							-0.0013359942884108023
AMFDHIPVGV	10	Unmodified	_AMFDHIPVGV_					0	0	0		ENST00000487704.5_1_22:32797732-32808215:-|nuORF;ENSG00000100220|ENST00000216038|RTCB	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	ENST00000487704.5_1_22:32797732-32808215:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	543.276052	1084.53755	2.3515	0.0012775	2.2248	0.0012087	4.5763	0.0024862	543.2774384263743	59.674	0.18901	59.999	59.901	60.09	0.32554	-0.068263	0.0021069	NaN	54.774	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	649710			1467	1254	689	695							-0.0013359942884108023
AMFENFVSV	9	Unmodified	_AMFENFVSV_					0	0	0		ENST00000478100.3_1_9:100403935-100409818:+|nuORF;ENSG00000136937|ENST00000375147|NCBP1	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.2485839724541	2	522.24696	1042.47937	1.9386	0.0010124	1.4139	0.00073842	3.3525	0.0017509	522.2479187259665	72.417	0.31921	72.417	72.237	72.557	0					24	9	3	0	0	0	0.12174	2	30167	30119;30167		42.095	21.641	1	1656600			1468	2751	690	696	1942;1943	1943					-0.040172810741296416
AMFENFVSV	9	Unmodified	_AMFENFVSV_					0	0	0		ENST00000478100.3_1_9:100403935-100409818:+|nuORF;ENSG00000136937|ENST00000375147|NCBP1	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.2487060427666	2	522.24696	1042.47937	1.9507	0.0010187	0.84488	0.00044123	2.7955	0.00146	522.247633980766	71.888	0.35007	72.213	72.038	72.388	0.32494					26	10	3	0	0	0	0.10294	2	30113	30065;30113		48.346	27.892	1	2453800			1469	2751	690	696	1944;1945	1945					-0.040172810741296416
AMFENFVSV	9	Unmodified	_AMFENFVSV_					0	0	0		ENST00000478100.3_1_9:100403935-100409818:+|nuORF;ENSG00000136937|ENST00000375147|NCBP1	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2486450076103	2	522.24696	1042.47937	3.1174	0.001628	0.5239	0.0002736	3.6413	0.0019016	522.2472012147833	70.853	0.37532	72.206	71.97	72.345	1.3536					39	11	4	0	0	0	0.083604	2	29720	29675;29720		54.774	27.892	1	10730000			1470	2751	690	696	1946;1947	1947					-0.040172810741296416
AMFENFVSV	9	Unmodified	_AMFENFVSV_					0	0	0		ENST00000478100.3_1_9:100403935-100409818:+|nuORF;ENSG00000136937|ENST00000375147|NCBP1	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	ENST00000478100.3_1_9:100403935-100409818:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2482787966728	2	522.24696	1042.47937	1.7729	0.00092589	0.40572	0.00021189	2.1786	0.0011378	522.2469437977479	70.34	0.40178	72.178	71.979	72.381	1.8378					42	12	4	0	0	0	0.066815	2	29474	29474;29522		61.357	30.588	1	7853500			1471	2751	690	696	1948;1949	1948					-0.040172810741296416
AMFGKLMTI	9	Unmodified	_AMFGKLMTI_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2733032107353	2	506.271924	1010.52929	2.3686	0.0011991	0.42201	0.00021365	2.7906	0.0014128	506.2722782635488	61.598	0.25339	61.598	61.456	61.709	0					17	7	3	0	0	0	0.32838	2	25653	25653;25703		24.021	8.1734	1	1218300			1472	2143	691	697	1950;1951	1950					0.02445130330181655
AMFGKLMTI	9	Unmodified	_AMFGKLMTI_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.2735778689384	2	506.271924	1010.52929	2.4616	0.0012462	0.2267	0.00011477	2.6883	0.001361	506.2722675357926	60.914	0.34514	61.242	61.044	61.389	0.32809					22	10	3	0	0	0	0.22154	2	25493	25493;25545		30.637	14.789	1	1079800			1473	2143	691	697	1952;1953	1952					0.02445130330181655
AMFGKLMTI	9	Unmodified	_AMFGKLMTI_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2733032107353	2	506.271924	1010.52929	2.7628	0.0013987	0.70321	0.00035602	3.466	0.0017547	506.27198479190304	59.65	0.49854	61.07	60.769	61.267	1.4196					36	15	3	0	0	0	0.019432	2	25054	25001;25054		99.799	55.941	1	7447000			1474	2143	691	697	1954;1955	1955					0.02445130330181655
AMFGKLMTI	9	Unmodified	_AMFGKLMTI_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2733032107353	2	506.271924	1010.52929	2.5552	0.0012936	1.6139	0.00081709	4.1691	0.0021107	506.2722895260295	59.111	0.44194	61.08	60.844	61.286	1.969					43	13	4	0	0	0	0.010279	2	24782	24782;24833		107.19	54.919	1	7703300			1475	2143	691	697	1956;1957	1956					0.02445130330181655
AMGQQPITF	9	Unmodified	_AMGQQPITF_					0	0	0		ENSG00000166123|ENST00000340124|GPT2	ENSG00000166123|ENST00000340124|GPT2	ENSG00000166123|ENST00000340124|GPT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7495605349541	2	496.747127	991.479702	2.5253	0.0012544	1.5577	0.00077379	4.083	0.0020282	496.7482929997098	84.626	0.30622	86.222	86.094	86.401	1.5962					12	9	2	0	0	0	0.32838	1	35494	35494		24.021	2.2739	1	1037800			1476	3879	692	698	1958	1958					-0.01637861354265624
AMGQQPITF	9	Unmodified	_AMGQQPITF_					0	0	0		ENSG00000166123|ENST00000340124|GPT2	ENSG00000166123|ENST00000340124|GPT2	ENSG00000166123|ENST00000340124|GPT2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	496.747127	991.479702	2.358	0.0011713	1.9235	0.00095548	4.2814	0.0021268	496.74836869293347	85.146	0.21043	86.305	86.179	86.389	1.159	0.041039	0.00029027	NaN	24.021	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	855100			1477	3879	692	698							-0.01637861354265624
AMIELVERL	9	Unmodified	_AMIELVERL_					0	0	0		ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.3066284060478	2	537.30481	1072.59507	1.9179	0.0010305	0.68239	0.00036665	2.6003	0.0013972	537.3052944338835	63.603	0.40396	63.603	63.398	63.802	0					30	12	3	0	0	0	0.043696	2	26506	26506;26556		72.968	24.622	1	3289000			1478	3894	693	699	1959;1960	1959					0.061672427767234694
AMIELVERL	9	Unmodified	_AMIELVERL_					0	0	0		ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.3066894412041	2	537.30481	1072.59507	1.949	0.0010472	0.90688	0.00048727	2.8559	0.0015345	537.3054740069565	63.003	0.40545	63.332	63.161	63.566	0.32974					30	12	3	0	0	0	0.093059	2	26441	26389;26441		51.63	15.503	1	3465600			1479	3894	693	699	1961;1962	1962					0.061672427767234694
AMIELVERL	9	Unmodified	_AMIELVERL_					0	0	0		ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	ENSG00000166326|ENST00000299413|TRIM44	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	537.3010742068291	2	537.30481	1072.59507	2.4216	0.0013011	3.264	0.0017538	5.6856	0.0030549	537.3066131524662	61.218	0.12246	63.183	63.127	63.25	1.9653					5	3	2	0	0	0	0.039406	1	25675	25675		55.503	17.352	1	6719600			1480	3894	693	699	1963	1963					0.061672427767234694
AMKHIEVIVKA	11	Unmodified	_AMKHIEVIVKA_					0	0	0		nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14;nc|ENSG00000135317|Q9Y5W7-2|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8710815310478	2	619.868108	1237.72166	2.2157	0.0013734	2.4227	0.0015017	4.6383	0.0028752	619.8693637329935	76.181	2.1643	77.475	76.512	78.676	1.2938					155	69	3	0	0	0	1.0362	1	32312	32312		1.3295	0.87119	1	2579300			1481	2656	694	700	1964	1964					0.11231169001871422
AMKKLLIIFSY	11	Unmodified	_AMKKLLIIFSY_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8966552615166	2	663.896334	1325.77812	2.556	0.0016969	-1.1336	-0.0007526	1.4224	0.00094434	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0366	1	35038	35038		1.1933	0.12188	1	6935600	+		1482	11590	695	701	1965	1965					0.1282579683854692
AMKKLLIIFSY	11	Unmodified	_AMKKLLIIFSY_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8972656130791	2	663.896334	1325.77812	1.9365	0.0012856	-0.72997	-0.00048462	1.2065	0.00080098	663.8956032949152	81.132	1.7839	81.422	80.623	82.407	0.29056					129	57	3	0	0	0	1.0366	1	33964	33964		1.1933	0.12188	1	3097800	+		1483	11590	695	701	1966	1966					0.1282579683854692
AMKKLLIIFSY	11	Unmodified	_AMKKLLIIFSY_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8971435427666	2	663.896334	1325.77812	2.3028	0.0015288	-0.48865	-0.00032441	1.8142	0.0012044	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0366	2	35155	35155;35206		1.1933	0.12188	1	5935800	+		1484	11590	695	701	1967;1968	1967					0.1282579683854692
AMKKLLIIFSY	11	Unmodified	_AMKKLLIIFSY_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8956786990166	2	663.896334	1325.77812	1.2234	0.00081219	-0.72993	-0.0004846	0.49343	0.00032759	663.8957189276996	79.95	1.2678	81.667	80.612	81.879	1.7167					73	40	3	0	0	0	1.0366	1	33491	33491		1.1933	0	1	1946900	+		1485	11590	695	701	1969	1969					0.1282579683854692
AMKKLLIIFSY	11	Unmodified	_AMKKLLIIFSY_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8959838747978	2	663.896334	1325.77812	3.0629	0.0020334	-0.30855	-0.00020485	2.7543	0.0018286	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0366	1	34841	34841		1.1933	0	1	4887400	+		1486	11590	695	701	1970	1970					0.1282579683854692
AMKNRERRIRR	11	Unmodified	_AMKNRERRIRR_					0	0	0			REV__nc|ENSG00000170345|P01100-2|FOS	REV__nc|ENSG00000170345|P01100-2|FOS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9600707888603	3	495.960032	1484.85827	1.913	0.00094878	-1.352	-0.00067055	0.56099	0.00027823	495.9591137591809	90.637	1.2817	90.637	90	91.281	0					98	40	4	0	0	0	1.0395	1	37877	37877		0.08335	0	1	4164400	+		1487	10982	696	702	1971	1971					0.13523096004928448
AMKNRERRIRR	11	Unmodified	_AMKNRERRIRR_					0	0	0			REV__nc|ENSG00000170345|P01100-2|FOS	REV__nc|ENSG00000170345|P01100-2|FOS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9599487185478	3	495.960032	1484.85827	3.2753	0.0016244	-3.0834	-0.0015292	0.19188	9.5165E-05	495.9585910148389	90.552	1.9189	90.761	90.049	91.968	0.20904					125	59	3	0	0	0	1.0395	1	38025	38025		0.08335	0.010087	1	2352600	+		1488	10982	696	702	1972	1972					0.13523096004928448
AMKNRERRIRR	11	Unmodified	_AMKNRERRIRR_					0	0	0			REV__nc|ENSG00000170345|P01100-2|FOS	REV__nc|ENSG00000170345|P01100-2|FOS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9591857790947	3	495.960032	1484.85827	4.8226	0.0023918	-1.8846	-0.0009347	2.938	0.0014571	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0395	1	37838	37838		0.08335	0.010087	1	3813600	+		1489	10982	696	702	1973	1973					0.13523096004928448
AMKPWLFNI	9	Unmodified	_AMKPWLFNI_					0	0	0		ENST00000479187.5_1_12:40692272-40758932:+|nuORF;ENSG00000188906|ENST00000298910|LRRK2;LRRK2|p.R1462Qfs*6|1|0.1|ENSG00000188906|chr12:40310497-40310498|CG/-|frameshift_variant	ENST00000479187.5_1_12:40692272-40758932:+|nuORF	ENST00000479187.5_1_12:40692272-40758932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3071777224541	2	560.304613	1118.59467	1.4643	0.00082047	1.0481	0.00058726	2.5124	0.0014077	560.3053101538377	53.389	0.35737	53.389	53.225	53.583	0					19	12	2	0	0	0	0.59203	1	22322	22322		11.64	1.5664	1	2014900			1490	4884	697	703	1974	1974					0.040118678475437264
AMKRIWIHRRG	11	Unmodified	_AMKRIWIHRRG_					0	0	0		nc|ENSG00000236438|C9JC47|FAM157A	nc|ENSG00000236438|C9JC47|FAM157A	nc|ENSG00000236438|C9JC47|FAM157A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	475.9622070193291	3	475.278702	1422.81428	2.444	0.0011616	0.2052	9.7528E-05	2.6492	0.0012591	475.2788566846173	52.78	0.79311	52.78	52.383	53.176	0					58	25	3	0	0	0	0.14606	1	22116	22116		2.8433	0.59056	1	2083900			1491	8005	698	704	1975	1975					0.11978111578582684
AMLAVLHTV	9	Unmodified	_AMLAVLHTV_					0	0	0		ENSG00000123395|ENST00000336854|ATG101	ENSG00000123395|ENST00000336854|ATG101	ENSG00000123395|ENST00000336854|ATG101	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7768432497978	2	477.775688	953.536823	1.6288	0.00077822	-0.00025133	-1.2008E-07	1.6286	0.0007781	477.77595140342515	48.423	0.33729	49.811	49.618	49.956	1.388					22	10	3	0	0	0	0.03795	1	20280	20280		77.984	39.833	1	2428300			1492	2189	699	705	1976	1976					0.058196059221018004
AMLAVLHTV	9	Unmodified	_AMLAVLHTV_					0	0	0		ENSG00000123395|ENST00000336854|ATG101	ENSG00000123395|ENST00000336854|ATG101	ENSG00000123395|ENST00000336854|ATG101	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	477.775688	953.536823	2.4458	0.0011686	-0.74961	-0.00035814	1.6962	0.00081041	477.775721645611	47.898	0.3081	49.874	49.681	49.989	1.976	0.031561	-0.00033633	NaN	77.984	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2076100			1493	2189	699	705							0.058196059221018004
AMLQRFTL	8	Unmodified	_AMLQRFTL_					0	0	0			REV__ENSG00000160785|ENST00000359511|SLC25A44	REV__ENSG00000160785|ENST00000359511|SLC25A44	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	490.3234741091728	2	490.273312	978.532072	2.7507	0.0013486	1.9287	0.0009456	4.6794	0.0022942	490.2745580685894	44.86	0.15557	46.226	46.118	46.274	1.3653					6	4	2	0	0	0	2.3239	1	18784	18784		10.183	3.8293	1	473520	+		1494	10612	700	706	1977	1977					0.04194721779367683
AMLTVLHEI	9	Unmodified	_AMLTVLHEI_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7874023318291	2	513.786253	1025.55795	2.1525	0.0011059	0.42068	0.00021614	2.5732	0.0013221	513.7864667036692	57.865	0.2882	57.865	57.69	57.978	0					13	8	2	0	0	0	0.10294	2	24128	24128;24179		48.346	19.859	1	753340			1495	1775	701	707	1978;1979	1978					0.04619571230955444
AMLTVLHEI	9	Unmodified	_AMLTVLHEI_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.7867309451103	2	513.786253	1025.55795	2.4664	0.0012672	-1.9597	-0.0010069	0.50666	0.00026032	513.785306442925	57.255	0.25819	57.576	57.5	57.758	0.32103					13	8	2	0	0	0	0.19075	1	24031	24031		34.102	17.16	1	1028100			1496	1775	701	707	1980	1980					0.04619571230955444
AMLTVLHEI	9	Unmodified	_AMLTVLHEI_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7856933474541	2	513.786253	1025.55795	0.6345	0.000326	-0.95453	-0.00049042	-0.32003	-0.00016443	513.7859283672155	56.074	0.23689	57.483	57.342	57.579	1.4099					18	12	2	0	0	0	0.051699	1	23506	23506		67.344	29.193	1	3374200			1497	1775	701	707	1981	1981					0.04619571230955444
AMLTVLHEI	9	Unmodified	_AMLTVLHEI_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3;nc|ENSG00000112249|Q8N3C0-4|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7859985232353	2	513.786253	1025.55795	0.78283	0.00040221	-1.2205	-0.00062706	-0.43763	-0.00022485	513.7857810247128	55.519	0.14435	57.487	57.416	57.56	1.9684					11	7	2	0	0	0	0.051699	1	23285	23285		67.344	31.3	1	4485200			1498	1775	701	707	1982	1982					0.04619571230955444
AMMLAKAG	8	Unmodified	_AMMLAKAG_					0	0	0		tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	792.4149658083916	1	792.410642	791.403366	2.8664	0.0022714	2.5188	0.0019959	5.3852	0.0042673	792.4120615028148	104.74	0.11627	104.91	104.82	104.94	0.1731					7	5	2	0	0	0	0.89008	1	44399	44399		2.5775	0	1	23622000			1499	17211	702	708	1983	1983					-0.0006795645524562133
AMMLAKAG	8	Unmodified	_AMMLAKAG_					0	0	0		tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	792.410642	791.403366	2.695	0.0021355	2.9426	0.0023317	5.6376	0.0044673	792.4118268764536	104.78	0.11316	104.94	104.86	104.97	0.16055	0.01576	0.00018846	NaN	2.5775	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12952000			1500	17211	702	708							-0.0006795645524562133
AMNDILAQV	9	Unmodified	_AMNDILAQV_					0	0	0		ENST00000565642.5_1_16:71777395-71799448:-|nuORF;AP1G1|p.N739Kfs*28|1|0.05|ENSG00000166747|chr16:71738993-71738994|-/C|frameshift_variant;ENSG00000166747|ENST00000299980|AP1G1;nc|ENSG00000166747|O43747-2|AP1G1;ENST00000565009.5_1_16:71790048-71805048:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7545654177666	2	487.75241	973.490267	2.5575	0.0012474	-0.82848	-0.0004041	1.729	0.00084334	487.7520933075033	59.606	0.34599	61.026	60.8	61.146	1.4196					18	10	2	0	0	0	0.11643	1	24993	24993		43.858	14.777	1	1284700			1501	67	703	709	1984	1984					0.0024612130016521405
AMNDILAQV	9	Unmodified	_AMNDILAQV_					0	0	0		ENST00000565642.5_1_16:71777395-71799448:-|nuORF;AP1G1|p.N739Kfs*28|1|0.05|ENSG00000166747|chr16:71738993-71738994|-/C|frameshift_variant;ENSG00000166747|ENST00000299980|AP1G1;nc|ENSG00000166747|O43747-2|AP1G1;ENST00000565009.5_1_16:71790048-71805048:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	ENST00000565642.5_1_16:71777395-71799448:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.75241	973.490267	2.5589	0.0012481	-0.062019	-3.025E-05	2.4969	0.0012179	487.75279602601836	59.113	0.28506	61.082	60.94	61.225	1.969	0.028046	0.00051067	NaN	43.858	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1050100			1502	67	703	709							0.0024612130016521405
AMQRAVFPL	9	Unmodified	_AMQRAVFPL_					0	0	0			REV__nc|ENSG00000103197|P49815-7|TSC2	REV__nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7864868044853	2	516.786587	1031.55862	2.4369	0.0012593	-1.1162	-0.00057682	1.3207	0.00068252	516.7849005469527	69.436	0.48206	70.801	70.614	71.096	1.3657					26	15	2	0	0	0	0.18999	1	29152	29152		34.187	3.9625	1	3409800	+		1503	9099	704	710	1985	1985					0.044104106706754465
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(89)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2742187380791	2	523.272978	1044.5314	2.2057	0.0011542	-0.81254	-0.00042518	1.3931	0.00072899	523.2728186416266	50.991	0.6937	50.991	50.691	51.385	0					83	21	5	0	0	0	0.02878	4	21256	21219;21256;21295;21335		89.401	41.652	1	39831000			1504	1854	705	711	1986;1987;1988;1989	1987		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(100)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.2743408083916	2	523.272978	1044.5314	1.8954	0.00099182	0.13184	6.8987E-05	2.0272	0.0010608	523.2732820742702	50.386	0.59279	50.715	50.419	51.012	0.32824					70	18	5	0	0	0	0.019486	4	21086	21042;21086;21124;21163		99.755	67.638	1	32164000			1505	1854	705	711	1990;1991;1992;1993	1991		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(73)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2735473513603	2	523.272978	1044.5314	1.5297	0.00080046	-0.038418	-2.0103E-05	1.4913	0.00078035	523.2730715799557	48.871	0.8367	50.259	49.833	50.67	1.388					92	26	5	0	0	0	0.043696	4	20442	20393;20442;20481;20521		72.968	40.851	1	66597000			1506	1854	705	711	1994;1995;1996;1997	1995		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(56)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2734252810478	2	523.272978	1044.5314	2.1254	0.0011122	-1.061	-0.00055518	1.0644	0.000557	523.272773828844	50.227	2.3023	51.618	50.643	52.945	1.3911					169	74	3	0	0	0	0.081597	8	21098	20810;20860;20899;20992;21046;21098;21204;21255		55.503	24.751	1	3443000			1507	1854	705	711	1998;1999;2000;2001;2002;2003;2004;2005	2003		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(80)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2734252810478	2	523.272978	1044.5314	2.1137	0.001106	-0.8452	-0.00044227	1.2685	0.00066376	523.2726734420365	48.366	0.83179	50.343	49.868	50.7	1.9772					91	26	5	0	0	0	0.036104	5	20221	20172;20221;20260;20299;20340		79.596	41.622	1	67014000			1508	1854	705	711	2006;2007;2008;2009;2010	2007		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_		AM(1)SSKFFLV		AM(52)SSKFFLV	0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2739745974541	2	523.272978	1044.5314	1.487	0.0007781	-0.56081	-0.00029346	0.92618	0.00048464	523.2729523003885	49.547	2.3001	51.524	50.669	52.969	1.9772					162	74	3	0	0	0	0.093059	8	20903	20566;20618;20757;20851;20903;20954;21006;21058		51.63	45.7	1	2828300			1509	1854	705	711	2011;2012;2013;2014;2015;2016;2017;2018	2015		32			0.01091882339642325
AMSSKFFLV	9	Oxidation (M)	_AM(Oxidation (M))SSKFFLV_					0	0	1		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	523.272978	1044.5314	2.1798	0.0011406	-2.6988	-0.0014122	-0.51899	-0.00027158	523.272897159339	51.724	1.7512	51.724	51.354	53.106	0	0.10184	-0.0014759	NaN	55.503	109	55	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1257200			1510	1854	705	711				32			0.01091882339642325
AMSSKFFLV	9	Unmodified	_AMSSKFFLV_					0	0	0		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.2764770388603	2	515.275521	1028.53649	2.238	0.0011532	-0.42796	-0.00022052	1.8101	0.00093269	515.2754613471435	59.021	0.7596	59.021	58.721	59.481	0					74	23	5	0	0	0	0.026734	5	24640	24516;24562;24601;24640;24679		92.653	48.246	1	47854000			1511	1854	705	712	2019;2020;2021;2022;2023	2022					0.02336186202251156
AMSSKFFLV	9	Unmodified	_AMSSKFFLV_					0	0	0		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.2773315310478	2	515.275521	1028.53649	2.6082	0.001344	0.43281	0.00022302	3.041	0.001567	515.2759397580916	58.376	0.5291	58.699	58.428	58.957	0.32298					53	16	4	0	0	0	0.023685	4	24442	24406;24442;24481;24520		96.367	92.653	1	69617000			1512	1854	705	712	2024;2025;2026;2027	2025					0.02336186202251156
AMSSKFFLV	9	Unmodified	_AMSSKFFLV_					0	0	0		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2762939333916	2	515.275521	1028.53649	1.819	0.00093731	-1.1707	-0.00060326	0.6483	0.00033405	515.2752594870701	57.047	0.80632	58.462	58.123	58.929	1.4145					88	27	5	0	0	0	0.010585	5	23878	23830;23878;23917;23956;24011		106.94	39.596	1	340100000			1513	1854	705	712	2028;2029;2030;2031;2032	2029					0.02336186202251156
AMSSKFFLV	9	Unmodified	_AMSSKFFLV_					0	0	0		ENST00000497817.1_1_3:55513315-55514913:-|nuORF;nc|ENSG00000114251|P41221-2|WNT5A;ENSG00000114251|ENST00000264634|WNT5A	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	ENST00000497817.1_1_3:55513315-55514913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2764770388603	2	515.275521	1028.53649	1.2504	0.0006443	-0.69514	-0.00035819	0.55526	0.00028611	515.275540992107	56.492	0.72572	58.461	58.149	58.874	1.9684					90	23	6	0	0	0	0.019486	4	23724	23596;23646;23685;23724		99.755	21.606	1	275520000			1514	1854	705	712	2033;2034;2035;2036	2036					0.02336186202251156
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2532836794853	2	452.252046	902.489538	2.5286	0.0011436	-0.13893	-6.2831E-05	2.3897	0.0010807	452.25190128836067	61.81	0.30978	62.14	62.012	62.321	0.32974					15	9	2	0	0	0	0.11478	1	25908	25908		44.407	15.92	1	944940			1515	663	706	713	2037	2037					0.03439326651130159
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	903.5011474490166	1	903.496815	902.489538	2.0273	0.0018317	-0.376	-0.00033972	1.6513	0.0014919	903.4966852255602	61.852	0.30978	62.182	62.012	62.321	0.32974					15	9	2	0	0	0	0.037761	1	25912	25912		78.149	10.806	1	946940			1516	663	706	713	2038	2038					0.03439326651130159
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	903.5005370974541	1	903.496815	902.489538	2.9597	0.0026741	0.994	0.00089807	3.9537	0.0035722	903.4976268866361	60.707	0.31729	62.126	61.964	62.281	1.4196					16	9	2	0	0	0	0.026836	1	25475	25475		92.491	25.148	1	1395400			1517	663	706	713	2039	2039					0.03439326651130159
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2538024783134	2	452.252046	902.489538	3.4692	0.001569	-0.71173	-0.00032188	2.7575	0.0012471	452.2519298856312	60.748	0.31584	62.168	61.933	62.249	1.4196					19	9	3	0	0	0	0.076627	1	25486	25486		57.471	6.6163	1	2148200			1518	663	706	713	2040	2040					0.03439326651130159
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2536193728447	2	452.252046	902.489538	3.3994	0.0015374	0.59464	0.00026893	3.994	0.0018063	452.25259244662516	60.155	0.34718	62.12	61.977	62.324	1.9653					20	10	3	0	0	0	0.059546	1	25250	25250		64.236	18.215	1	2640400			1519	663	706	713	2041	2041					0.03439326651130159
AMTQLLAGV	9	Unmodified	_AMTQLLAGV_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	903.4990722537041	1	903.496815	902.489538	3.0278	0.0027356	-0.21986	-0.00019864	2.808	0.002537	903.4971184113008	60.217	0.31513	62.183	61.977	62.292	1.9653					14	9	2	0	0	0	0.073578	1	25276	25276		58.679	12.658	1	1289800			1520	663	706	713	2042	2042					0.03439326651130159
AMYDCDTV	8	Unmodified	_AMYDCDTV_					0	0	0			REV__ENSG00000179598|ENST00000321560|PLD6	REV__ENSG00000179598|ENST00000321560|PLD6	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1727172732353	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.096	1	56.501	56.001	57.001	1.4048								0	0	0	1.0178	1	23069	23069		5.7604	0	1		+		1521	11280	707	714	2043	2043					-0.1308575503933298
AMYGGLVLF	9	Unmodified	_AMYGGLVLF_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7583190798759	2	485.756964	969.499375	2.5063	0.0012174	1.6329	0.00079321	4.1392	0.0020107	485.7576867693892	84.614	0.21626	86.21	86.064	86.28	1.5962					8	6	2	0	0	0	0.64949	1	35511	35511		9.3474	2.9933	1	689260			1522	3852	708	715	2044	2044					0.01340514656499181
AMYPHIFYF	9	Unmodified	_AMYPHIFYF_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.7822753787041	2	594.78097	1187.54739	3.2961	0.0019604	-0.96581	-0.00057444	2.3303	0.001386	594.7793576634558	72.7	0.405	74.03	73.852	74.257	1.3298					39	12	4	0	0	0	0.051525	2	30504	30504;30559		67.413	46.998	1	5340800			1523	2367;5357	709	716	2045;2046	2045					-0.03888411423463367
AMYPHIFYF	9	Unmodified	_AMYPHIFYF_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.7819702029228	2	594.78097	1187.54739	2.7825	0.001655	-1.4859	-0.00088379	1.2966	0.00077119	594.7789439722925	72.216	0.39739	74.026	73.801	74.198	1.8101					37	12	4	0	0	0	0.026036	2	30307	30257;30307		93.763	72.016	1	6142300			1524	2367;5357	709	716	2047;2048	2048					-0.03888411423463367
ANDLFIMIV	9	Unmodified	_ANDLFIMIV_					0	0	0			REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1035.556567370892	1	1035.55433	1034.54705	2.6732	0.0027682	0.7768	0.00080441	3.45	0.0035726	1035.5544434097815	82.511	0.30493	82.791	82.644	82.949	0.2802					17	9	2	0	0	0	0.1109	1	34484	34484		45.7	5.7499	1	1558500	+		1525	15659	710	717	2049	2049					0.031161688566726298
ANDLFIMIV	9	Unmodified	_ANDLFIMIV_					0	0	0			REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2820922732353	2	518.280803	1034.54705	3.6973	0.0019162	-2.8569	-0.0014807	0.84036	0.00043554	518.2797588706443	81.603	0.40094	82.836	82.626	83.027	1.2332					37	12	4	0	0	0	0.086433	1	34276	34276		53.833	1.1397	1	3731700	+		1526	15659	710	717	2050	2050					0.031161688566726298
ANDLFIMIV	9	Unmodified	_ANDLFIMIV_					0	0	0			REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	REV__tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	518.280803	1034.54705	2.3811	0.0012341	1.3822	0.00071638	3.7633	0.0019504	518.2817955968139	82.531	0.33565	82.811	82.613	82.949	0.2802	-0.064349	0.0017749	NaN	53.833	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2401800	+		1527	15659	710	717							0.031161688566726298
ANGGCGGY	8	Unmodified	_ANGGCGGY_					0	0	0			REV__ENST00000470076.1_1_3:48601830-48602402:-|nuORF	REV__ENST00000470076.1_1_3:48601830-48602402:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2559081912041	1	698.25625	697.248974	1.6974	0.0011852	-2.1074	-0.0014715	-0.41	-0.00028629	698.2552222743316	46.375	1.6392	46.704	46.144	47.783	0.32899					69	54	2	0	0	0	0.89008	1	19795	19795		2.5775	1.7838	1	398380	+		1528	9405	711	718	2051	2051					-0.1117606961626052
ANGKLVGRKGV	11	Unmodified	_ANGKLVGRKGV_					0	0	0		nc|ENSG00000215846|A8MV57|MPTX1	nc|ENSG00000215846|A8MV57|MPTX1	nc|ENSG00000215846|A8MV57|MPTX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1098.678393542767	1	1098.6742	1097.66693	3.6376	0.0039965	-0.67901	-0.00074602	2.9586	0.0032505	1098.6722411003307	108.46	0.1061	108.51	108.42	108.53	0.050644					12	6	2	0	0	0	1.0366	1	46632	46632		1.1933	0.59184	1	23683000			1529	7998	712	719	2052	2052					0.12199918245482877
ANGTPETPTV	10	Unmodified	_ANGTPETPTV_					0	0	0		nc|ENSG00000180336|A2RUB1-1|MEIOC;nc|ENSG00000180336|A2RUB1-2|MEIOC;nc|ENSG00000180336|A2RUB1-5|MEIOC;ENSG00000180336|ENST00000409122|MEIOC	nc|ENSG00000180336|A2RUB1-1|MEIOC	nc|ENSG00000180336|A2RUB1-1|MEIOC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7450439333916	2	493.743096	985.47164	3.5055	0.0017308	-0.81763	-0.0004037	2.6879	0.0013271	493.74338243999716	72.974	0.46867	74.304	74.101	74.569	1.3297					47	14	4	0	0	0	0.65574	1	30707	30707		20.454	1.0146	1	24005000			1530	4544	713	720	2053	2053					-0.02167717070051367
ANIEERTM	8	Unmodified	_ANIEERTM_					0	0	0			REV__ENSG00000198832|ENST00000400299|SELENOM	REV__ENSG00000198832|ENST00000400299|SELENOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2320434451103	2	482.231842	962.44913	1.2765	0.00061558	-1.1058	-0.00053323	0.17077	8.235E-05	482.23184622098654	22.674	0.24099	23.889	23.769	24.01	1.2145					15	7	3	0	0	0	0.87106	1	9491	9491		14.582	2.0501	1	1164300	+		1531	11741	714	721	2054	2054					-0.0335963973931257
ANIEERTM	8	Unmodified	_ANIEERTM_					0	0	0			REV__ENSG00000198832|ENST00000400299|SELENOM	REV__ENSG00000198832|ENST00000400299|SELENOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2319824099541	2	482.231842	962.44913	0.34933	0.00016846	-0.024468	-1.1799E-05	0.32486	0.00015666	482.2320871792223	22.382	0.27331	23.997	23.831	24.104	1.6158					16	8	3	0	0	0	0.87935	1	9331	9331		9.3474	1.4373	1	1468500	+		1532	11741	714	721	2055	2055					-0.0335963973931257
ANIEERTM	8	Unmodified	_ANIEERTM_					0	0	0			REV__ENSG00000198832|ENST00000400299|SELENOM	REV__ENSG00000198832|ENST00000400299|SELENOM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	482.231842	962.44913	1.2765	0.00061558	-1.1058	-0.00053323	0.17077	8.235E-05	482.23184622098654	22.674	0.24099	23.889	23.769	24.01	1.2145	-0.054261	-0.00060496	NaN	14.582	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1164300	+		1533	11741	714	721							-0.0335963973931257
ANIEERTM	8	Unmodified	_ANIEERTM_					0	0	0			REV__ENSG00000198832|ENST00000400299|SELENOM	REV__ENSG00000198832|ENST00000400299|SELENOM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	482.231842	962.44913	0.34933	0.00016846	-0.024468	-1.1799E-05	0.32486	0.00015666	482.2320871792223	22.382	0.27331	23.997	23.831	24.104	1.6158	0.054261	0.00043791	NaN	14.582	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1468500	+		1534	11741	714	721							-0.0335963973931257
ANNQIKEAI	9	Unmodified	_ANNQIKEAI_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1869994997978	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.319	1	66.319	65.819	66.819	0								0	0	0	0.42693	1	27627	27627		1.1933	0.12188	1				1535	476	715	722	2056	2056					0.03512268437839339
ANNQIKEAI	9	Unmodified	_ANNQIKEAI_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1863891482353	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.447	1	66.447	65.947	66.947	0								0	0	0	0.42693	1	27678	27678		1.1933	0.41681	1				1536	476	715	722	2057	2057					0.03512268437839339
APAFFVFF	8	Unmodified	_APAFFVFF_					0	0	0			REV__tr|A0A553SJ98|A0A553SJ98_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16380PE=4SV=1	REV__tr|A0A553SJ98|A0A553SJ98_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16380PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2495605349541	2	473.247089	944.479626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.24	1	105.3	104.8	105.8	0.056801								0	0	0	1.0178	1	44571	44571		0.79363	0	1		+		1537	14892	716	723	2058	2058					0.005165067080497465
APALLNNPVHQ	11	Unmodified	_APALLNNPVHQ_					0	0	0		ENSG00000173714|ENST00000311378|WFIKKN2	ENSG00000173714|ENST00000311378|WFIKKN2	ENSG00000173714|ENST00000311378|WFIKKN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	587.4122192263603	2	587.32238	1172.63021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.917	1	96.319	95.819	96.819	0.40208								0	0	0	0.63775	1	40352	40352		3.2813	0	1				1538	4298	717	724	2059	2059					0.05079621628897257
APALPMPLLS	10	Unmodified	_APALPMPLLS_					0	0	0			REV__ENST00000414441.5_1_7:100031292-100031550:+|nuORF	REV__ENST00000414441.5_1_7:100031292-100031550:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2910949587822	2	505.291171	1008.56779	2.1526	0.0010877	0.017356	8.7699E-06	2.17	0.0010965	505.29024800645817	81.54	0.50581	81.54	81.288	81.794	0					48	16	5	0	0	0	0.87699	1	34004	34004		3.9444	0	1	10716000	+		1539	12931	718	725	2060	2060					0.0638475923635724
APARLFALL	9	Unmodified	_APARLFALL_					0	0	0		nc|ENSG00000124145|P31431-2|SDC4;ENSG00000124145|ENST00000372733|SDC4	nc|ENSG00000124145|P31431-2|SDC4	nc|ENSG00000124145|P31431-2|SDC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3067504763603	2	486.30547	970.596387	1.9458	0.00094625	1.2944	0.0006295	3.2402	0.0015757	486.3059157583748	67.583	0.42875	68.961	68.724	69.153	1.3778					31	13	3	0	0	0	0.033794	2	28342	28299;28342		81.613	25.072	1	10841000			1540	2208	719	726	2061;2062	2062					0.10991244927799926
APARLFALL	9	Unmodified	_APARLFALL_					0	0	0		nc|ENSG00000124145|P31431-2|SDC4;ENSG00000124145|ENST00000372733|SDC4	nc|ENSG00000124145|P31431-2|SDC4	nc|ENSG00000124145|P31431-2|SDC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3066894412041	2	486.30547	970.596387	1.2421	0.00060405	1.1923	0.00057984	2.4345	0.0011839	486.3059402252378	67.019	0.40363	68.908	68.675	69.078	1.8889					28	12	3	0	0	0	0.033794	2	28119	28075;28119		81.613	43.462	1	9922100			1541	2208	719	726	2063;2064	2064					0.10991244927799926
APARRKGG	8	Unmodified	_APARRKGG_					0	0	0		tr|A0A553SPA1|A0A553SPA1_NIACIRibosomalRNAsmallsubunitmethyltransferaseHOS=NialliacirculansOX=1397GN=rsmHPE=3SV=1	tr|A0A553SPA1|A0A553SPA1_NIACIRibosomalRNAsmallsubunitmethyltransferaseHOS=NialliacirculansOX=1397GN=rsmHPE=3SV=1	tr|A0A553SPA1|A0A553SPA1_NIACIRibosomalRNAsmallsubunitmethyltransferaseHOS=NialliacirculansOX=1397GN=rsmHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	812.4864990115166	1	812.484945	811.477669	1.7976	0.0014605	0.96239	0.00078193	2.76	0.0022425	812.4856761766657	78.276	0.41414	78.585	78.355	78.769	0.30933					19	12	2	0	0	0	0.89176	1	32766	32766		0.79363	0	1	1236500			1542	16457	720	727	2065	2065					0.06438890742811054
APAVIGLPI	9	Unmodified	_APAVIGLPI_					0	0	0		ENST00000359013.4_1_3:30648217-30664756:+|nuORF	ENST00000359013.4_1_3:30648217-30664756:+|nuORF	ENST00000359013.4_1_3:30648217-30664756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7755615115166	2	425.773471	849.53239	1.4149	0.00060243	2.9119	0.0012398	4.3268	0.0018423	425.7749457020512	24.443	0.54302	25.684	25.485	26.028	1.241					58	17	5	0	0	0	0.82604	1	10174	10174		2.3027	0	1	150570000			1543	6015	721	728	2066	2066					0.10160464770854105
APAVIGLPI	9	Unmodified	_APAVIGLPI_					0	0	0		ENST00000359013.4_1_3:30648217-30664756:+|nuORF	ENST00000359013.4_1_3:30648217-30664756:+|nuORF	ENST00000359013.4_1_3:30648217-30664756:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	425.773471	849.53239	0.30553	0.00013008	3.8963	0.0016589	4.2018	0.001789	425.7753981838274	26.191	0.89719	26.191	25.995	26.892	0	0.33586	0.00039053	NaN	2.3027	83	29	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	177740000			1544	6015	721	728							0.10160464770854105
APAVLVEKL	9	Unmodified	_APAVLVEKL_					0	0	0			REV__ENSG00000196531|ENST00000454682|NACA	REV__ENSG00000196531|ENST00000454682|NACA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	314.7122070193291	3	313.867299	938.580068	-3.0659	-0.00096227	3.0413	0.00095457	-0.024539	-7.7019E-06	313.8692743999	22.666	0.32486	22.666	22.369	22.694	0					14	10	2	0	0	0	0.11944	1	9391	9391		0.96228	0.0979	1	803960	+		1545	11637	722	729	2067	2067					0.10832118971029558
APCCCPWH	8	Unmodified	_APCCCPWH_					0	0	0			REV__ENST00000368874.8_2_1:151264779-151264956:-|nuORF	REV__ENST00000368874.8_2_1:151264779-151264956:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0398742556572	3	306.113605	915.318984	-3.4917	-0.0010688	0.85478	0.00026166	-2.6369	-0.00080719	306.11389499496954	13.189	0.18702	13.189	13.021	13.208	0					7	5	2	0	0	0	2.3239	1	5425	5425		0	0	1	454110	+		1546	12644	723	730	2068	2068					-0.14206230543663878
APCYGYDE	8	Unmodified	_APCYGYDE_					0	0	0		ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1727172732353	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.835	1	35.109	34.609	35.609	1.2746								0	0	0	1.0178	1	14199	14199		0.79363	0	1				1547	7276	724	731	2069	2069					-0.1342268182169164
APCYGYDE	8	Unmodified	_APCYGYDE_					0	0	0		ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1725952029228	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.958	1	32.773	32.273	33.273	1.8151								0	0	0	1.0178	1	12977	12977		0.79363	0.79363	1				1548	7276	724	731	2070	2070					-0.1342268182169164
APCYGYDE	8	Unmodified	_APCYGYDE_					0	0	0		ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	ENST00000552852.1_1_12:76509499-76509865:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1725036501884	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.458	1	36.28	35.78	36.78	1.8227								0	0	0	1.0178	1	14448	14448		0.79363	0	1				1549	7276	724	731	2071	2071					-0.1342268182169164
APDMSSSEEFP	11	Unmodified	_APDMSSSEEFP_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP;ENST00000494862.1_1_2:242169018-242169382:-|nuORF;ENST00000487169.5_1_2:242169018-242169255:-|nuORF;ENST00000484412.1_1_2:242169018-242170248:-|nuORF	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	599.3060790896416	2	598.742436	1195.47032	2.5312	0.0015155	3.8616	0.0023121	6.3927	0.0038276	598.7438628986117	62.892	0.34047	64.836	64.564	64.905	1.9444					15	10	2	0	0	0	0.14606	1	26327	26327		3.2813	0	1	612640			1550	1932	725	732	2072	2072					-0.11959719221113119
APDNVLLTL	9	Unmodified	_APDNVLLTL_					0	0	0		ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2772704958916	2	478.276575	954.538597	0.7639	0.00036536	0.43448	0.0002078	1.1984	0.00057316	478.27675990875326	56.361	0.59652	57.772	57.552	58.149	1.4109					49	19	4	0	0	0	0.026836	2	23572	23572;23700		92.491	7.2194	1	22073000			1551	4576	726	733	2073;2074	2073					0.0595093821170849
APDNVLLTL	9	Unmodified	_APDNVLLTL_					0	0	0		ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.2776977419853	2	478.276575	954.538597	0.91041	0.00043543	-0.33912	-0.0001622	0.57128	0.00027323	478.27645093270576	55.799	0.58068	57.768	57.599	58.18	1.9684					45	19	3	0	0	0	0.033504	3	23466	23366;23466;23552		81.89	3.8939	1	17393000			1552	4576	726	733	2075;2076;2077	2076					0.0595093821170849
APEEHPVLL	9	Unmodified	_APEEHPVLL_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000196604|ENST00000409914|POTEF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7746154665947	2	502.7742	1003.53385	0.75076	0.00037746	-0.048312	-2.429E-05	0.70245	0.00035317	502.77393638139137	32.145	0.48189	33.427	33.255	33.737	1.2812					53	16	4	0	0	0	0.0075027	4	13500	13456;13500;13538;13583		112.59	68.186	1	18153000			1553	937	727	734	2078;2079;2080;2081	2079					0.032220540689422705
APEEHPVLL	9	Unmodified	_APEEHPVLL_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENSG00000196604|ENST00000409914|POTEF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7741882205009	2	502.7742	1003.53385	0.61835	0.00031089	-0.32053	-0.00016116	0.29782	0.00014974	502.773804691145	31.642	0.5442	33.467	33.186	33.73	1.8246					63	20	4	0	0	0	0.0037165	4	13240	13196;13240;13280;13317		125.62	81.218	1	17269000			1554	937	727	734	2082;2083;2084;2085	2083					0.032220540689422705
APEFFTDAR	9	Unmodified	_APEFFTDAR_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	351.0799743533134	3	351.83818	1052.49271	-1.1511	-0.00040501	-3.7883	-0.0013329	-4.9395	-0.0017379	351.8364350627268	65.878	0.38235	65.878	65.676	66.058	0					15	11	2	0	0	0	0.11941	1	27512	27512		0	0	1	529780			1555	2443	728	735	2086	2086					-0.031437069705361864
APEFFTDAR	9	Unmodified	_APEFFTDAR_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	351.83818	1052.49271	1.5768	0.00055479	-7.3835	-0.0025978	-5.8067	-0.002043	351.8355826889976	65.438	0.35101	65.765	65.578	65.929	0.32689	0.017644	-0.00079391	NaN	0	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	672510			1556	2443	728	735							-0.031437069705361864
APEFFTDAR	9	Unmodified	_APEFFTDAR_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	351.83818	1052.49271	2.477	0.00087151	-7.856	-0.0027641	-5.379	-0.0018925	351.83546391097593	63.792	0.46317	65.72	65.425	65.888	1.928	-0.027582	-0.0012927	NaN	0	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2052900			1557	2443	728	735							-0.031437069705361864
APEKWAEQ	8	Unmodified	_APEKWAEQ_					0	0	0			REV__nc|ENSG00000189348|A6NNH2|FAM90A27P	REV__nc|ENSG00000189348|A6NNH2|FAM90A27P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	958.4619018435478	1	958.462872	957.455596	1.1938	0.0011442	1.5576	0.0014929	2.7514	0.0026371	958.4643125047468	38.411	0.5025	40.247	39.959	40.461	1.8366					35	15	3	0	0	0	0.88504	1	16192	16192		5.7604	0	1	3718400	+		1558	14516	729	736	2087	2087					-0.024833785162968525
APELLKHPK	9	Unmodified	_APELLKHPK_					0	0	0		ABCF1|p.R604H|1|0.24|ENSG00000204574|chr6:30586231-30586231|G/A|missense_variant	ABCF1|p.R604H|1|0.24|ENSG00000204574|chr6:30586231-30586231|G/A|missense_variant	ABCF1|p.R604H|1|0.24|ENSG00000204574|chr6:30586231-30586231|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2383605837822	3	344.878198	1031.61277	-0.1664	-5.7389E-05	-4.4297	-0.0015277	-4.5961	-0.0015851	345.20983361958116	17.357	0.13591	18.659	18.586	18.722	1.3023					6	4	2	0	0	0	0.11901	1	7206	7206		1.0715	0.61312	1	211220			1559	10	730	737	2088	2088					0.09822326093899392
APFELRLTV	9	Unmodified	_APFELRLTV_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3060790896416	2	523.305667	1044.59678	2.1225	0.0011107	-2.4614	-0.0012881	-0.33886	-0.00017733	523.3040168816407	70.383	0.95076	72.221	71.309	72.26	1.8378					43	29	2	0	0	0	0.32838	1	29450	29450		24.021	1.2843	1	1808800	+		1560	8522	731	738	2089	2089					0.07626619856978323
APFELRLTV	9	Unmodified	_APFELRLTV_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	523.305667	1044.59678	2.1225	0.0011107	-2.4614	-0.0012881	-0.33886	-0.00017733	523.3040168816407	70.383	0.95076	72.221	71.309	72.26	1.8378	0.015109	0.00010652	NaN	24.021	43	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1808800	+		1561	8522	731	738							0.07626619856978323
APFILRLGRPR	11	Unmodified	_APFILRLGRPR_					0	0	0			REV__ENST00000308234.11_1_5:98105044-98106367:+|nuORF	REV__ENST00000308234.11_1_5:98105044-98106367:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	324.7082397341728	4	324.706929	1294.79861	1.1118	0.00036102	1.4871	0.00048289	2.599	0.00084391	324.7074102871331	42.452	0.86642	44.373	43.827	44.694	1.9211					58	27	3	0	0	0	1.0365	1	17780	17780		1.2148	0.10508	1	2398900	+		1562	12349	732	739	2090	2090					0.16300148333198194
APFKFDMEL	9	Unmodified	_APFKFDMEL_					0	0	0		ENST00000491588.1_1_22:22123495-22123630:-|nuORF;nc|ENSG00000100030|P28482-2|MAPK1;ENSG00000100030|ENST00000215832|MAPK1	ENST00000491588.1_1_22:22123495-22123630:-|nuORF	ENST00000491588.1_1_22:22123495-22123630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2709228396416	2	549.270435	1096.52632	2.8945	0.0015899	-1.4553	-0.00079935	1.4392	0.00079051	549.2698643436783	64.41	0.394	65.817	65.622	66.016	1.4071					38	12	4	0	0	0	0.00020031	2	26995	26995;27043		142.08	87.306	1	17337000			1563	1230	733	740	2091;2092	2091					-0.01808421522991921
APFKFDMEL	9	Unmodified	_APFKFDMEL_					0	0	0		ENST00000491588.1_1_22:22123495-22123630:-|nuORF;nc|ENSG00000100030|P28482-2|MAPK1;ENSG00000100030|ENST00000215832|MAPK1	ENST00000491588.1_1_22:22123495-22123630:-|nuORF	ENST00000491588.1_1_22:22123495-22123630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2712890505791	2	549.270435	1096.52632	2.9027	0.0015943	-1.118	-0.0006141	1.7846	0.00098024	549.2698629537269	63.852	0.36837	65.78	65.582	65.95	1.928					35	11	4	0	0	0	0.0060384	2	26818	26769;26818		118.07	68.135	1	19374000			1564	1230	733	740	2093;2094	2094					-0.01808421522991921
APGSKGLL	8	Unmodified	_APGSKGLL_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-2|EML5;ENST00000553281.5_1_14:89088194-89171927:-|nuORF	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1019470095634	2	371.726521	741.438489	-0.10721	-3.9854E-05	2.6396	0.00098122	2.5324	0.00094137	371.72838109783333	30.009	0.398	31.291	31.104	31.502	1.2825					16	12	2	0	0	0	2.3239	1	12586	12586		0.79363	0.79363	1	1598800			1565	3843	734	741	2095	2095					0.05742745668578664
APHPFLHRYY	10	Unmodified	_APHPFLHRYY_					0	0	0		nc|ENSG00000186318|P56817-4|BACE1;nc|ENSG00000186318|P56817-3|BACE1;nc|ENSG00000186318|P56817-2|BACE1;ENSG00000186318|ENST00000313005|BACE1	nc|ENSG00000186318|P56817-4|BACE1	nc|ENSG00000186318|P56817-4|BACE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.8365966677666	2	650.832914	1299.65128	2.589	0.001685	-1.2495	-0.00081322	1.3395	0.00087181	650.833827670779	93.267	0.4557	93.435	93.19	93.646	0.16835					19	13	2	0	0	0	0.79742	1	39055	39055		12.532	1.7076	1	928010			1566	4786	735	742	2096	2096					0.013436317284003962
APIDLLYEL	9	Unmodified	_APIDLLYEL_					0	0	0		ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|3|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|2|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|4|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|6|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|5|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|1|intron;nc|ENSG00000011451|O95785-4|WIZ;nc|ENSG00000011451|O95785-3|WIZ;WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant;nc|ENSG00000011451|O95785|WIZ;ENSG00000011451|ENST00000673675|WIZ	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1046.588183581829	1	1046.57684	1045.56956	4.1881	0.0043832	-1.4707	-0.0015392	2.7175	0.002844	1046.5712996509087	90.49	0.15841	91.472	91.367	91.525	0.98157					6	4	2	0	0	0	0.054363	1	38135	38135		44.407	15.92	1	838310			1567	571;572	736	743	2097	2097					0.04860091525961252
APIDLLYEL	9	Unmodified	_APIDLLYEL_					0	0	0		ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|3|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|2|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|4|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|6|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|5|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|1|intron;nc|ENSG00000011451|O95785-4|WIZ;nc|ENSG00000011451|O95785-3|WIZ;WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant;nc|ENSG00000011451|O95785|WIZ;ENSG00000011451|ENST00000673675|WIZ	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1046.57684	1045.56956	5.1683	0.005409	1.2589	0.0013176	6.4272	0.0067266	1046.5820813095877	90.088	0.089699	91.493	91.431	91.52	1.4045	0.010609	0.0014631	NaN	44.407	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	759140			1568	571;572	736	743							0.04860091525961252
APIGWGSIII	10	Unmodified	_APIGWGSIII_					0	0	0			REV__ENSG00000163328|ENST00000392552|GPR155	REV__ENSG00000163328|ENST00000392552|GPR155	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.8066284060478	2	513.80276	1025.59097	2.2571	0.0011597	3.1381	0.0016124	5.3952	0.0027721	513.8045531535205	81.514	0.72016	81.514	81.319	82.039	0					48	23	3	0	0	0	0.87699	1	34005	34005		3.9444	0.3479	1	13040000	+		1569	10680	737	744	2098	2098					0.0791952134532039
APIRKFLNLV	10	Unmodified	_APIRKFLNLV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.8715087771416	2	585.871508	1169.72846	2.641	0.0015473	-3.4427	-0.002017	-0.80164	-0.00046966	585.8691193766927	107.5	0.1999	107.55	107.44	107.64	0.052452					27	9	4	0	0	0	0.88022	1	45980	45980		3.5965	1.7523	1	50545000	+		1570	10351	738	745	2099	2099					0.15038849944721733
APIRKFLNLV	10	Unmodified	_APIRKFLNLV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	585.871508	1169.72846	1.3282	0.00077815	-1.356	-0.00079446	-0.027841	-1.6311E-05	585.8704234268524	107.52	0.17311	107.52	107.41	107.58	0	-0.054517	0.0023894	NaN	3.5965	21	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39398000	+		1571	10351	738	745							0.15038849944721733
APIRKFLNLV	10	Unmodified	_APIRKFLNLV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	585.871508	1169.72846	2.641	0.0015473	-3.4427	-0.002017	-0.80164	-0.00046966	585.8691193766927	107.5	0.1999	107.55	107.44	107.64	0.052452	-0.021821	-5.5576E-05	NaN	3.5965	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50545000	+		1572	10351	738	745							0.15038849944721733
APIRKFLNLV	10	Unmodified	_APIRKFLNLV_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	585.871508	1169.72846	3.2057	0.0018781	-4.2155	-0.0024697	-1.0098	-0.00059159	585.8686575064004	107.44	0.17347	107.59	107.5	107.68	0.15795	0.018896	-0.00096109	NaN	3.5965	27	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75916000	+		1573	10351	738	745							0.15038849944721733
APKEPTTPAL	10	Unmodified	_APKEPTTPAL_					0	0	0			REV__nc|ENSG00000116690|Q92954-4|PRG4	REV__nc|ENSG00000116690|Q92954-4|PRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2903930544853	2	512.787307	1023.56006	2.9627	0.0015192	-1.6066	-0.00082385	1.3561	0.00069538	513.2884914507648	50.286	0.53606	51.677	51.324	51.86	1.3911					52	16	5	0	0	0	0.77604	1	20995	20995		14.838	2.3067	1	7479800	+		1574	9478	739	746	2100	2100					0.04922323240396054
APKKAAAP	8	Unmodified	_APKKAAAP_					0	0	0			REV__ENSG00000189350|ENST00000379558|TOGARAM2	REV__ENSG00000189350|ENST00000379558|TOGARAM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2339660525322	2	377.234513	752.454474	-0.19729	-7.4426E-05	-1.5409	-0.00058129	-1.7382	-0.00065571	377.2339489445352	58.809	0.44743	58.809	58.526	58.974	0					22	13	2	0	0	0	0.89051	1	24526	24526		2.3027	0	1	3950500	+		1575	11610	740	747	2101	2101					0.06834451905456262
APKKKMTPIKR	11	Unmodified	_APKKKMTPIKR_					0	0	0			REV__ENST00000380716.8_1_9:15486059-15486895:-|nuORF	REV__ENST00000380716.8_1_9:15486059-15486895:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2782165408134	3	433.276075	1296.8064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.73	1	87.277	86.777	87.777	1.547								0	0	0	0.63775	1	36066	36066		0.094841	0	1		+		1576	12761	741	748	2102	2102					0.16986539538447687
APKKKMTPIKR	11	Unmodified	_APKKKMTPIKR_					0	0	0			REV__ENST00000380716.8_1_9:15486059-15486895:-|nuORF	REV__ENST00000380716.8_1_9:15486059-15486895:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2788879275322	3	433.276075	1296.8064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.904	1	87.451	86.951	87.951	1.547								0	0	0	0.63775	1	36161	36161		0.094841	0	1		+		1577	12761	741	748	2103	2103					0.16986539538447687
APKKVKMK	8	Unmodified	_APKKVKMK_					0	0	0			REV__ENSG00000181104|ENST00000319211|F2R	REV__ENSG00000181104|ENST00000319211|F2R	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1344177126884	3	310.537007	928.589193	-2.0945	-0.00065042	1.1371	0.00035313	-0.95735	-0.00029729	310.53741768107056	54.468	1.6437	54.468	53.339	54.982	0					76	52	2	0	0	0	2.3239	1	22681	22681		0	0	1	2561700	+		1578	11314	742	749	2104	2104					0.1220418905572842
APKKVKMK	8	Unmodified	_APKKVKMK_					0	0	0			REV__ENSG00000181104|ENST00000319211|F2R	REV__ENSG00000181104|ENST00000319211|F2R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1344482302666	3	310.537007	928.589193	0.17797	5.5267E-05	-1.4927	-0.00046354	-1.3147	-0.00040827	310.53661590969193	48.902	1.0501	50.29	49.804	50.854	1.388					57	33	2	0	0	0	2.3239	1	20600	20600		0	0	1	3643700	+		1579	11314	742	749	2105	2105					0.1220418905572842
APLHLLLR	8	Unmodified	_APLHLLLR_					0	0	0			REV__ENST00000366756.3_1_6:170592768-170593014:-|nuORF	REV__ENST00000366756.3_1_6:170592768-170593014:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1348144412041	3	311.539517	931.596721	-0.39733	-0.00012378	1.0589	0.00032988	0.66156	0.0002061	311.539716626455	14.754	0.52802	14.867	14.48	15.008	0.11295					25	16	2	0	0	0	2.3239	1	6021	6021		0	0	1	537050	+		1580	12612	743	750	2106	2106					0.1281866464767063
APLLLQLWEK	10	Unmodified	_APLLLQLWEK_					0	0	0		chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.8675414919853	2	605.863349	1209.71214	4.0679	0.0024646	0.36045	0.00021838	4.4283	0.002683	605.8633132497041	94.987	0.36625	95.728	95.487	95.853	0.74124					22	12	2	0	0	0	0.45795	2	39900	39900;39954		29.841	7.1043	1	3536900			1581	224	744	751	2107;2108	2107					0.11567723987991485
APLLLQLWEK	10	Unmodified	_APLLLQLWEK_					0	0	0		chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	chr19:16530674-16532598|97|10.24|0.05|7.59|-|0|CHERP,CHERP|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3668090701103	2	605.863349	1209.71214	3.2766	0.0019852	-0.22802	-0.00013815	3.0486	0.001847	605.8631352193097	94.528	0.40026	95.717	95.527	95.928	1.1887					30	12	4	0	0	0	0.34658	2	39741	39741;39791		36.506	13.77	1	4021300			1582	224	744	751	2109;2110	2109					0.11567723987991485
APLPLVVLLV	10	Unmodified	_APLPLVVLLV_					0	0	0			REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2385131716728	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.815	1	28.086	27.586	28.586	1.2715								0	0	0	0.66237	1	11230	11230		0.15932	0	1		+		1583	8213	745	752	2111	2111					0.1796642845297356
APLPLVVLLV	10	Unmodified	_APLPLVVLLV_					0	0	0			REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2354308962822	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.898	1	30.181	29.681	30.681	1.2825								0	0	0	0.66237	1	12118	12118		0.15932	0	1		+		1584	8213	745	752	2112	2112					0.1796642845297356
APLPLVVLLV	10	Unmodified	_APLPLVVLLV_					0	0	0			REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2382995486259	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.97	1	20.494	19.994	20.994	1.5237								0	0	0	0.66237	1	7887	7887		0.15932	0	1		+		1585	8213	745	752	2113	2113					0.1796642845297356
APLPLVVLLV	10	Unmodified	_APLPLVVLLV_					0	0	0			REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2399474978447	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.472	1	30.247	29.747	30.747	1.7754								0	0	0	0.66237	1	11922	11922		0.15932	0	1		+		1586	8213	745	752	2114	2114					0.1796642845297356
APLPLVVLLV	10	Unmodified	_APLPLVVLLV_					0	0	0			REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	REV__ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2388183474541	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.598	1	30.373	29.873	30.873	1.7754								0	0	0	0.66237	1	11976	11976		0.15932	0	1		+		1587	8213	745	752	2115	2115					0.1796642845297356
APLQRRAG	8	Unmodified	_APLQRRAG_					0	0	0			REV__ENST00000478253.5_1_3:58223274-58223340:+|nuORF	REV__ENST00000478253.5_1_3:58223274-58223340:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.7597839236259	2	434.759218	867.503883	1.0567	0.00045943	0.20501	8.9128E-05	1.2617	0.00054856	434.7592833629648	69.063	0.62156	69.063	68.737	69.358	0					50	19	4	0	0	0	0.89051	1	28725	28725		2.3027	0	1	17095000	+		1588	13326	746	753	2116	2116					0.06483159914284897
APLRDPTLRD	10	Unmodified	_APLRDPTLRD_					0	0	0		ENST00000438017.5_1_3:42695550-42695823:-|nuORF	ENST00000438017.5_1_3:42695550-42695823:-|nuORF	ENST00000438017.5_1_3:42695550-42695823:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3198730349541	2	577.319837	1152.62512	1.2498	0.00072153	-3.3766	-0.0019494	-2.1268	-0.0012279	577.3201702645971	25.172	0.60239	26.432	26.046	26.649	1.2594					30	19	2	0	0	0	0.88022	1	10505	10505		3.5965	0.60125	1	451630			1589	6541	747	754	2117	2117					0.054913177662683665
APLRRRRRA	9	Unmodified	_APLRRRRRA_					0	0	0			REV__ENST00000270792.9_1_1:26606524-26606650:+|nuORF	REV__ENST00000270792.9_1_1:26606524-26606650:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1529418826103	3	384.583002	1150.72718	0.3453	0.0001328	-2.1095	-0.00081127	-1.7642	-0.00067847	384.5818761439715	23.992	1.0134	25.677	25.149	26.163	1.6845					97	33	4	0	0	0	0.11941	1	10214	10214		0	0	1	14964000	+		1590	12235	748	755	2118	2118					0.15784073419217748
APLVKRYVS	9	Unmodified	_APLVKRYVS_					0	0	0			REV__ENSG00000148468|ENST00000378116|FAM171A1	REV__ENSG00000148468|ENST00000378116|FAM171A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2379943728447	3	344.878198	1031.61277	-0.14878	-5.1311E-05	3.3132	0.0011427	3.1644	0.0010913	345.214384373739	17.844	0.26464	19.292	19.111	19.375	1.448					14	8	2	0	0	0	0.11901	1	7362	7362		2.7352	1.6637	1	559780	+		1591	10347	749	756	2119	2119					0.09822326093899392
APLVLKPNV	9	Unmodified	_APLVLKPNV_					0	0	0		nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1;ENST00000492174.1_1_9:138741977-138754403:-|nuORF;CAMSAP1|p.F701Pfs*21|1|0.82|ENSG00000130559|chr9:135822560-135822561|-/TGGAATGGTATGGAATGGAATCAACGCGAGTGCAGGG|frameshift_variant	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	475.8054382205009	2	475.805303	949.596052	3.5265	0.001678	-3.5424	-0.0016855	-0.01581	-7.5224E-06	475.80343109184025	107.73	0.16377	107.78	107.69	107.86	0.052452					26	8	4	0	0	0	0.83753	1	46132	46132		1.8442	1.2427	1	100130000			1592	2441	750	757	2120	2120					0.11923825207941263
APLVLKPNV	9	Unmodified	_APLVLKPNV_					0	0	0		nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1;ENSG00000130559|ENST00000389532|CAMSAP1;nc|ENSG00000130559|Q5T5Y3-3|CAMSAP1;ENST00000492174.1_1_9:138741977-138754403:-|nuORF;CAMSAP1|p.F701Pfs*21|1|0.82|ENSG00000130559|chr9:135822560-135822561|-/TGGAATGGTATGGAATGGAATCAACGCGAGTGCAGGG|frameshift_variant	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	nc|ENSG00000130559|Q5T5Y3-2|CAMSAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	475.8065063357353	2	475.805303	949.596052	3.3817	0.001609	-3.8526	-0.0018331	-0.47083	-0.00022402	475.80354002184816	107.68	0.16552	107.84	107.74	107.9	0.15795					22	8	4	0	0	0	0.83753	1	46308	46308		1.8442	1.0506	1	143800000			1593	2441	750	757	2121	2121					0.11923825207941263
APNIVWYYY	9	Unmodified	_APNIVWYYY_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	397.2438232302666	3	396.862325	1187.56515	-0.84198	-0.00033415	-1.1309	-0.00044879	-1.9728	-0.00078294	396.8616720499005	11.402	0.126	12.071	11.981	12.107	0.66934					6	3	2	0	0	0	0.11812	1	4727	4727		2.7352	0.64919	1	182060	+		1594	11078	751	758	2122	2122					-0.021133728969516596
APNYKTLFY	9	Unmodified	_APNYKTLFY_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2926513552666	2	558.78985	1115.56515	2.0937	0.00117	0.64607	0.00036102	2.7398	0.001531	558.7906979039282	46.933	0.25581	48.316	48.154	48.41	1.3825					13	7	2	0	0	0	0.61249	1	19647	19647		10.824	1.4765	1	545220			1595	2430	752	759	2123	2123					0.011986271030536955
APNYKTLFY	9	Unmodified	_APNYKTLFY_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.7908203005791	2	558.78985	1115.56515	1.6061	0.00089745	1.1536	0.00064461	2.7596	0.0015421	558.7906276394915	46.455	0.2215	48.425	48.251	48.472	1.9703					11	6	2	0	0	0	0.61249	1	19467	19467		10.824	0.64053	1	532120			1596	2430	752	759	2124	2124					0.011986271030536955
APPTSWEK	8	Unmodified	_APPTSWEK_					0	0	0			REV__tr|A0A7D7A150|A0A7D7A150_9CLOTFprAfamilyA-typeflavoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02400PE=3SV=1	REV__tr|A0A7D7A150|A0A7D7A150_9CLOTFprAfamilyA-typeflavoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02400PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.2335998415947	2	458.232168	914.449782	0.87701	0.00040187	3.1804	0.0014573	4.0574	0.0018592	458.23355397855386	18.313	0.56749	18.313	18.171	18.739	0					35	20	3	0	0	0	0.88055	1	7624	7624		8.5933	2.8329	1	1230100	+		1597	15820	753	760	2125	2125					-0.010864770279567892
APQKRRRAKK	10	Unmodified	_APQKRRRAKK_					0	0	0		ENSG00000129347|ENST00000312962|KRI1;ENST00000536689.5_1_19:10664629-10668377:-|nuORF;ENST00000537363.5_1_19:10664629-10670250:-|nuORF	ENSG00000129347|ENST00000312962|KRI1	ENSG00000129347|ENST00000312962|KRI1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1343566775322	4	310.453365	1237.78436	-2.0801	-0.00064578	1.3567	0.00042119	-0.72343	-0.00022459	310.70449857674816	53.826	0.84383	53.826	53.276	54.12	0					45	27	2	0	0	0	0.12561	1	22340	22340		0	0	1	2608100			1598	2400	754	761	2126	2126					0.1749749590492229
APQSLILKL	9	Unmodified	_APQSLILKL_					0	0	0		ENSG00000115221|ENST00000283249|ITGB6;nc|ENSG00000115221|P18564-2|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.8201171755791	2	491.81841	981.622267	1.7765	0.00087369	1.4761	0.00072597	3.2526	0.0015997	491.8190041707801	54.416	0.35043	55.82	55.613	55.964	1.4048					21	10	3	0	0	0	0.014947	2	22794	22748;22794		103.42	31.497	1	2620100			1599	1904	755	762	2127;2128	2128					0.1307209437942447
APQSLILKL	9	Unmodified	_APQSLILKL_					0	0	0		ENSG00000115221|ENST00000283249|ITGB6;nc|ENSG00000115221|P18564-2|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.8188354372978	2	491.81841	981.622267	1.3981	0.00068763	0.43392	0.00021341	1.8321	0.00090105	491.81870912640085	53.83	0.34447	55.8	55.658	56.003	1.9697					17	10	2	0	0	0	0.039278	2	22537	22537;22589		76.825	14.252	1	1921700			1600	1904	755	762	2129;2130	2129					0.1307209437942447
APRDEPRE	8	Unmodified	_APRDEPRE_					0	0	0			REV__ENST00000519402.5_1_5:156668627-156679685:+|nuORF	REV__ENST00000519402.5_1_5:156668627-156679685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2429992556572	2	485.241055	968.467557	1.8779	0.00091125	2.227	0.0010806	4.105	0.0019919	485.24213929971506	76.305	0.36131	76.305	76.105	76.466	0					22	11	3	0	0	0	0.89124	1	31781	31781		1.8442	1.0506	1	2846500	+		1601	9377	756	763	2131	2131					-0.01793761773103597
APRERRKRR	9	Unmodified	_APRERRKRR_					0	0	0			REV__ENST00000462274.1_1_21:38739279-38845117:+|nuORF	REV__ENST00000462274.1_1_21:38739279-38845117:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.1913329958916	4	306.943165	1223.74355	-2.0127	-0.00061779	-1.737	-0.00053316	-3.7497	-0.0011509	307.19273024992077	81.426	2.3162	81.426	80.728	83.045	0					93	75	2	0	0	0	0.11954	1	34471	34471		0	0	1	549530	+		1602	13207	757	764	2132	2132					0.14063154585301163
APRFLSGLL	9	Unmodified	_APRFLSGLL_					0	0	0		ENST00000343253.11_1_1:93645610-93648926:+|nuORF	ENST00000343253.11_1_1:93645610-93648926:+|nuORF	ENST00000343253.11_1_1:93645610-93648926:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2017394900322	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.1	1	103.16	102.66	103.66	0.062805								0	0	0	0.42693	1	43208	43208		1.0715	0	1				1603	5947	758	765	2133	2133					0.08826654548136048
APRFLSGLL	9	Unmodified	_APRFLSGLL_					0	0	0		ENST00000343253.11_1_1:93645610-93648926:+|nuORF	ENST00000343253.11_1_1:93645610-93648926:+|nuORF	ENST00000343253.11_1_1:93645610-93648926:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	325.2013122439384	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.19	1	103.36	102.86	103.86	0.16445								0	0	0	0.42693	1	43478	43478		1.0715	0	1				1604	5947	758	765	2134	2134					0.08826654548136048
APRLRIPR	8	Unmodified	_APRLRIPR_					0	0	0			REV__ENST00000280191.6_1_4:177116606-177116819:-|nuORF	REV__ENST00000280191.6_1_4:177116606-177116819:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	326.9922973513603	3	326.882166	977.624667	0.90563	0.00029603	-1.7695	-0.00057842	-0.86388	-0.00028239	326.8816575015025	53.975	0.37748	55.944	55.784	56.161	1.9697					18	11	2	0	0	0	2.3239	1	22642	22642		0	0	1	1282800	+		1605	12251	759	766	2135	2135					0.1349598762773212
APRLRIPR	8	Unmodified	_APRLRIPR_					0	0	0			REV__ENST00000280191.6_1_4:177116606-177116819:-|nuORF	REV__ENST00000280191.6_1_4:177116606-177116819:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	326.882166	977.624667	0.46235	0.00015114	-1.6226	-0.0005304	-1.1602	-0.00037926	326.8820199146711	54.347	0.50835	55.752	55.582	56.09	1.4048	-0.096107	0.0001064	NaN	0	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1066400	+		1606	12251	759	766							0.1349598762773212
APSDIPIIMQ	10	Unmodified	_APSDIPIIMQ_					0	0	0		tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7919799685478	2	542.788992	1083.56343	1.6046	0.00087097	2.4312	0.0013196	4.0358	0.0021906	542.7893647615107	48.371	0.47063	49.758	49.333	49.804	1.388					22	14	2	0	0	0	0.32206	1	20211	20211		37.974	1.847	1	3449200			1607	16474	760	767	2136	2136					0.024992500227881465
APSGGGKT	8	Unmodified	_APSGGGKT_					0	0	0			REV__ENSG00000283526|ENST00000636672|PRRT1B	REV__ENSG00000283526|ENST00000636672|PRRT1B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.2168762087822	2	337.677028	673.339503	0.90915	0.000307	-3.3782	-0.0011407	-2.469	-0.00083373	337.6748228684901	45.729	0.96915	47.699	47.249	48.219	1.9703					45	30	2	0	0	0	2.3239	1	19314	19314		0	0	1	520610	+		1608	12033	761	768	2137	2137					-0.010232772963490788
APSISGSSURS	11	Unmodified	_APSISGSSURS_					0	0	0		nc|ENSG00000211452|P49895-6|DIO1	nc|ENSG00000211452|P49895-6|DIO1	nc|ENSG00000211452|P49895-6|DIO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2172119021416	2	550.217706	1098.42086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1945	1	8.831	8.331	9.331	0.63651								0	0	0	0.63775	1	3395	3395		0	0	0				1609	7985	762	769	2138	2138					-0.12441489949969764
APSISGSSURS	11	Unmodified	_APSISGSSURS_					0	0	0		nc|ENSG00000211452|P49895-6|DIO1	nc|ENSG00000211452|P49895-6|DIO1	nc|ENSG00000211452|P49895-6|DIO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2171508669853	2	550.217706	1098.42086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2923	1	8.9289	8.4289	9.4289	0.63651								0	0	0	0.63775	1	3437	3437		0	0	0				1610	7985	762	769	2139	2139					-0.12441489949969764
APSPPPPPRER	11	Unmodified	_APSPPPPPRER_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	600.8300659060478	2	600.827829	1199.64111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.354	1	42.675	42.175	43.175	0.32058								0	0	0	0.6377	1	17790	17790		14.957	8.7514	1		+		1611	13733	763	770	2140	2140					0.049270240031546564
APSPPPPPRER	11	Unmodified	_APSPPPPPRER_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	600.8294555544853	2	600.827829	1199.64111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.48	1	42.801	42.301	43.301	0.32058								0	0	0	0.63772	1	17843	17843		9.544	4.647	1		+		1612	13733	763	770	2141	2141					0.049270240031546564
APSPPPPPRER	11	Unmodified	_APSPPPPPRER_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	600.8326293826103	2	600.827829	1199.64111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.634	1	42.954	42.454	43.454	0.32058								0	0	0	0.63772	1	17907	17907		9.544	2.8208	1		+		1613	13733	763	770	2142	2142					0.049270240031546564
APSPPPPPRER	11	Unmodified	_APSPPPPPRER_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	600.8303100466728	2	600.827829	1199.64111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.074	1	43.397	42.897	43.897	0.32389								0	0	0	0.6377	1	18091	18091		12.175	5.4516	1		+		1614	13733	763	770	2143	2143					0.049270240031546564
APSTIIFHL	9	Unmodified	_APSTIIFHL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7877075076103	2	499.78711	997.559667	2.5348	0.0012669	-0.27952	-0.0001397	2.2553	0.0011272	499.78698834622605	60.025	0.51198	61.445	61.206	61.718	1.4196					52	16	4	0	0	0	2.2613E-05	3	25169	25131;25169;25220		170.4	96.001	1	30188000			1615	2045	764	771	2144;2145;2146	2145					0.06078948311221666
APSTIIFHL	9	Unmodified	_APSTIIFHL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7880737185478	2	499.78711	997.559667	2.5778	0.0012884	-0.61545	-0.00030759	1.9624	0.00098078	499.7866878914777	59.512	0.4781	61.481	61.225	61.703	1.969					41	15	3	0	0	0	0.0045981	3	24986	24935;24986;25045		123.1	72.241	1	30793000			1616	2045	764	771	2147;2148;2149	2148					0.06078948311221666
APVLLRRRQS	10	Unmodified	_APVLLRRRQS_					0	0	0			REV__ENST00000523752.5_1_8:22880186-22885396:-|nuORF	REV__ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2522155642509	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.833	1	29.608	29.108	30.108	1.7754								0	0	0	0.66218	1	11650	11650		0.77653	0.078866	1		+		1617	9142	765	772	2150	2150					0.14134698402403956
APWATELL	8	Unmodified	_APWATELL_					0	0	0			REV__ENST00000485259.1_1_9:35741569-35741881:-|nuORF	REV__ENST00000485259.1_1_9:35741569-35741881:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7457153201103	2	450.744911	899.475269	1.8947	0.00085403	-0.027732	-1.25E-05	1.867	0.00084153	450.744786281513	49.54	0.3787	51.517	51.286	51.665	1.9772					22	11	3	0	0	0	0.74212	1	20758	20758		26.341	6.9023	1	2347000	+		1618	13386	766	773	2151	2151					0.0215099749447063
AQADFAKVL	9	Unmodified	_AQADFAKVL_					0	0	0		ENSG00000110711|ENST00000279146|AIP	ENSG00000110711|ENST00000279146|AIP	ENSG00000110711|ENST00000279146|AIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7723266482353	2	481.768917	961.523281	2.4195	0.0011656	1.678	0.0008084	4.0975	0.001974	481.7700555103266	39.729	0.33077	41.039	40.877	41.207	1.3102					23	10	3	0	0	0	0.1109	1	16669	16669		45.7	20.3	1	2077000			1619	1713	767	774	2152	2152					0.04098071414523474
AQADFAKVL	9	Unmodified	_AQADFAKVL_					0	0	0		ENSG00000110711|ENST00000279146|AIP	ENSG00000110711|ENST00000279146|AIP	ENSG00000110711|ENST00000279146|AIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7722961306572	2	481.768917	961.523281	1.3539	0.00065227	3.5202	0.0016959	4.8741	0.0023482	481.77093808495096	39.276	0.37133	41.113	40.88	41.252	1.8366					19	11	2	0	0	0	0.20244	2	16470	16420;16470		32.786	14.243	1	1909000			1620	1713	767	774	2153;2154	2154					0.04098071414523474
AQAKIYWNL	9	Unmodified	_AQAKIYWNL_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8045532107353	2	553.803291	1105.59203	1.636	0.00090604	-0.26957	-0.00014929	1.3665	0.00075675	553.8037442934642	48.218	0.44035	49.606	49.333	49.774	1.388					34	13	4	0	0	0	0.091139	2	20151	20151;20200		52.268	26.869	1	2506200			1621	4956	768	775	2155;2156	2155					0.0434573571421879
AQAKIYWNL	9	Unmodified	_AQAKIYWNL_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3048583865166	2	553.803291	1105.59203	2.4065	0.0013327	-0.66188	-0.00036655	1.7446	0.00096618	554.3038232512222	47.752	0.43235	49.728	49.466	49.898	1.976					30	13	3	0	0	0	0.073578	2	20014	19967;20014		58.679	34.658	1	2725200			1622	4956	768	775	2157;2158	2158					0.0434573571421879
AQARLPRGRPR	11	Unmodified	_AQARLPRGRPR_					0	0	0		ENSG00000166246|ENST00000299320|DNAAF8	ENSG00000166246|ENST00000299320|DNAAF8	ENSG00000166246|ENST00000299320|DNAAF8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.5924865603447	3	426.593566	1276.75887	2.002	0.00085405	-1.83	-0.00078068	0.17197	7.3363E-05	426.5925712615957	40.079	0.53226	40.391	40.227	40.759	0.31263					30	16	3	0	0	0	1.0369	1	16995	16995		1.1098	0.24538	1	1606900			1623	3890	769	776	2159	2159					0.13156021382496874
AQCGFILPLL	10	Unmodified	_AQCGFILPLL_					0	0	0		ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.8069946169853	2	537.804445	1073.59434	4.496	0.002418	-4.457	-0.002397	0.038954	2.095E-05	538.3031803144369	90.464	0.35374	91.446	91.205	91.558	0.98157					26	10	4	0	0	0	0.5476	1	38111	38111		25.399	2.2509	1	2554500			1624	6255	770	777	2160	2160					0.06048448127694428
AQCLVLHCL	9	Unmodified	_AQCLVLHCL_					0	0	0			REV__ENST00000519973.5_1_8:23430856-23431090:+|nuORF	REV__ENST00000519973.5_1_8:23430856-23431090:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.8090698122978	2	500.259348	998.504143	2.7703	0.0013859	-0.23505	-0.00011759	2.5353	0.0012683	500.25975566714794	59.84	0.27935	61.809	61.671	61.95	1.969					10	8	2	0	0	0	0.067699	1	25146	25146		38.151	9.978	1	713760	+		1625	13622	771	778	2161	2161					0.004830755275975207
AQCLVLHCL	9	Unmodified	_AQCLVLHCL_					0	0	0			REV__ENST00000519973.5_1_8:23430856-23431090:+|nuORF	REV__ENST00000519973.5_1_8:23430856-23431090:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	500.259348	998.504143	2.8878	0.0014447	0.031235	1.5626E-05	2.9191	0.0014603	500.25921527820475	60.321	0.24463	61.741	61.597	61.841	1.4196	-0.034338	6.373E-05	NaN	38.151	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561220	+		1626	13622	771	778							0.004830755275975207
AQDEHLITF	9	Unmodified	_AQDEHLITF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2681762576103	2	537.266739	1072.51892	2.0942	0.0011251	-1.3347	-0.00071706	0.75953	0.00040807	537.2667149826663	42.12	0.37399	43.46	43.26	43.634	1.3399					26	11	3	0	0	0	0.053939	1	17656	17656		66.457	24.617	1	2687700			1627	3062	772	779	2162	2162					-0.014434377990482972
AQDEHLITF	9	Unmodified	_AQDEHLITF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2676879763603	2	537.266739	1072.51892	1.9888	0.0010685	-1.8371	-0.00098701	0.15169	8.1497E-05	537.2660467143503	41.599	0.34193	43.492	43.295	43.637	1.8927					24	10	3	0	0	0	0.10473	2	17453	17410;17453		47.749	9.2335	1	2697100			1628	3062	772	779	2163;2164	2164					-0.014434377990482972
AQFEHTILL	9	Unmodified	_AQFEHTILL_					0	0	0		nc|ENSG00000111142|P50579-3|METAP2;nc|ENSG00000111142|P50579-2|METAP2;ENSG00000111142|ENST00000323666|METAP2	nc|ENSG00000111142|P50579-3|METAP2	nc|ENSG00000111142|P50579-3|METAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2957641482353	2	536.295299	1070.57605	1.5686	0.00084124	-2.0897	-0.0011207	-0.5211	-0.00027946	536.2941026168289	48.46	0.52133	49.848	49.618	50.14	1.388					36	16	3	0	0	0	0.086433	1	20281	20281		53.833	13.875	1	3817500			1629	1726	773	780	2165	2165					0.04358029477339187
AQFEHTILL	9	Unmodified	_AQFEHTILL_					0	0	0		nc|ENSG00000111142|P50579-3|METAP2;nc|ENSG00000111142|P50579-2|METAP2;ENSG00000111142|ENST00000323666|METAP2	nc|ENSG00000111142|P50579-3|METAP2	nc|ENSG00000111142|P50579-3|METAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2957031130791	2	536.295299	1070.57605	2.5252	0.0013543	-3.2015	-0.001717	-0.67627	-0.00036268	536.2933580560772	47.937	0.5219	49.913	49.713	50.234	1.976					30	16	3	0	0	0	0.053939	1	20067	20067		66.457	20.436	1	2939900			1630	1726	773	780	2166	2166					0.04358029477339187
AQFTLEHLL	9	Unmodified	_AQFTLEHLL_					0	0	0			REV__nc|ENSG00000076944|Q15833-2|STXBP2	REV__nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.2966186404228	2	536.295299	1070.57605	1.9347	0.0010376	-1.6927	-0.00090779	0.24202	0.0001298	536.2943354616756	50.568	0.3493	50.568	50.373	50.723	0					20	9	3	0	0	0	0.66839	1	21070	21070		8.5933	0	1	1431900	+		1631	8773	774	781	2167	2167					0.04358029477339187
AQGAGPRV	8	Unmodified	_AQGAGPRV_					0	0	0			REV__ENST00000570136.5_1_16:2588053-2611615:+|nuORF	REV__ENST00000570136.5_1_16:2588053-2611615:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2122070193291	2	378.211569	754.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.492	1	39.312	38.812	39.812	1.8202								0	0	0	1.0178	1	15728	15728		2.5775	0	1		+		1632	13961	775	782	2168	2168					0.021558067232263056
AQISWVTVF	9	Unmodified	_AQISWVTVF_					0	0	0		ENST00000596953.5_1_19:14640508-14675852:+|nuORF;ENSG00000099797|ENST00000215567|TECR;ENST00000593637.5_1_19:14640508-14674910:+|nuORF;ENST00000594807.5_1_19:14674592-14674910:+|nuORF;ENST00000503270.2_3_4:125384624-125384930:-|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7867309451103	2	525.784567	1049.55458	2.2397	0.0011776	1.0693	0.00056221	3.309	0.0017398	525.7850545496636	83.3	0.44263	84.488	84.262	84.704	1.1879					43	13	4	0	0	0	0.079895	3	34971	34933;34971;35012		56.177	14.082	1	8792800			1633	1215	776	783	2169;2170;2171	2170					0.03178644448621526
AQISWVTVF	9	Unmodified	_AQISWVTVF_					0	0	0		ENST00000596953.5_1_19:14640508-14675852:+|nuORF;ENSG00000099797|ENST00000215567|TECR;ENST00000593637.5_1_19:14640508-14674910:+|nuORF;ENST00000594807.5_1_19:14674592-14674910:+|nuORF;ENST00000503270.2_3_4:125384624-125384930:-|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7862426638603	2	525.784567	1049.55458	2.5728	0.0013528	0.30118	0.00015836	2.874	0.0015111	525.7848006849933	82.87	0.52513	84.54	84.265	84.79	1.67					41	16	3	0	0	0	0.079895	1	34762	34762		56.177	22.075	1	6838800			1634	1215	776	783	2172	2172					0.03178644448621526
AQKARWLIPL	10	Unmodified	_AQKARWLIPL_					0	0	0		nc|ENSG00000111271|Q6JQN1-3|ACAD10;ENST00000508303.5_1_12:112159488-112186840:+|nuORF;nc|ENSG00000111271|Q6JQN1-2|ACAD10;ENST00000413681.7_1_12:112130513-112186840:+|nuORF;ENSG00000111271|ENST00000313698|ACAD10;nc|ENSG00000111271|Q6JQN1-5|ACAD10;AAK1-ACAD10|1|fusion	nc|ENSG00000111271|Q6JQN1-3|ACAD10	nc|ENSG00000111271|Q6JQN1-3|ACAD10	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502929568291	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4463	1	4.1915	3.6915	4.6915	0.74525								0	0	0	0.66222	1	1429	1429		0.69767	0.42865	1				1635	2	777	784	2173	2173					0.13413965801987615
AQLGGPEAAK	10	Unmodified	_AQLGGPEAAK_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2561523318291	2	471.256174	940.497795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.16	1	12.854	12.354	13.354	0.69396								0	0	0	0.44856	1	5052	5052		27.223	11.376	1				1636	1559	778	785	2174	2174					0.025165968920873638
AQLGGPEAAK	10	Unmodified	_AQLGGPEAAK_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1;ENST00000423240.1_1_9:74622799-74623024:-|nuORF	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2574035525322	2	471.256174	940.497795	0.44492	0.00020967	0.82618	0.00038934	1.2711	0.00059901	471.25671403075347	12.042	0.15185	12.829	12.724	12.876	0.78751					7	4	2	0	0	0	0.31135	1	4991	4991		38.615	11.731	1	811370			1637	1559	778	785	2175	2175					0.025165968920873638
AQLLAKAA	8	Unmodified	_AQLLAKAA_					0	0	0			REV__nc|ENSG00000070814|Q13428-2|TCOF1	REV__nc|ENSG00000070814|Q13428-2|TCOF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2483093142509	2	393.247621	784.480688	2.5815	0.0010152	-3.4925	-0.0013734	-0.91105	-0.00035827	393.2470364200612	75.032	0.71974	75.356	74.864	75.584	0.32464					48	22	3	0	0	0	0.89051	1	31438	31438		2.3027	0	1	3120200	+		1638	8721	779	786	2176	2176					0.0798272107693947
AQLTLPEKPI	10	Unmodified	_AQLTLPEKPI_					0	0	0			REV__nc|ENSG00000203722|Q6H3X3-2|RAET1G	REV__nc|ENSG00000203722|Q6H3X3-2|RAET1G	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	555.2532226443291	2	555.331882	1108.64921	2.4436	0.001357	3.2522	0.001806	5.6957	0.003163	555.3331993647824	76.562	0.2593	78.329	78.127	78.386	1.7672					9	7	2	0	0	0	0.12529	1	32051	32051		6.2058	0.97511	1	274130	+		1639	11762	780	787	2177	2177					0.09923158199944737
AQLYLVLY	8	Unmodified	_AQLYLVLY_					0	0	0			REV__ENSG00000162407|ENST00000371250|PLPP3	REV__ENSG00000162407|ENST00000371250|PLPP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5616332888603	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.7006	1	32019	32019		30.225	0	1	44767000	+		1640	10643	781	788	2178	2178					0.06200430079695707
AQPGFFDRF	9	Unmodified	_AQPGFFDRF_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7642700076103	2	542.764166	1083.51378	2.0112	0.0010916	-0.13151	-7.1378E-05	1.8797	0.0010202	542.7637194151613	50.572	0.24627	51.966	51.831	52.078	1.3938					12	7	2	0	0	0	0.22861	1	21163	21163		29.841	1.3537	1	1106900			1641	2985	782	789	2179	2179					-0.024636968710183282
AQPGFFDRF	9	Unmodified	_AQPGFFDRF_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.7649413943291	2	542.764166	1083.51378	1.6688	0.00090578	2.2499	0.0012212	3.9187	0.0021269	542.7639338603307	49.987	0.30879	51.964	51.819	52.128	1.9772					22	9	3	0	0	0	0.33297	1	20921	20921		23.79	2.0431	1	1728500			1642	2985	782	789	2180	2180					-0.024636968710183282
AQQAMDIHFH	10	Unmodified	_AQQAMDIHFH_					0	0	0		nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU;nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-3|CLU	nc|ENSG00000120885|P10909-3|CLU	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.2508117556572	3	399.853835	1196.53968	1.2431	0.00049704	1.3547	0.00054168	2.5978	0.0010387	399.8544346509132	45.702	0.50316	47.672	47.44	47.943	1.9703					36	15	3	0	0	0	0.12555	1	19087	19087		0.69767	0.69767	1	2511800			1643	2121	783	790	2181	2181					-0.0507317069104829
AQQSRRLFDWL	11	Unmodified	_AQQSRRLFDWL_					0	0	0			REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.3762695193291	2	710.378217	1418.74188	0.57683	0.00040977	-2.7629	-0.0019627	-2.1861	-0.0015529	710.3766619357231	50.926	0.30001	52.32	52.168	52.468	1.3938					14	9	2	0	0	0	0.42228	1	21317	21317		26.268	5.8536	1	1869800	+		1644	11077	784	791	2182	2182					0.049260559860613284
AQQSRRLFDWL	11	Unmodified	_AQQSRRLFDWL_					0	0	0			REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	710.378217	1418.74188	0.57683	0.00040977	-2.7629	-0.0019627	-2.1861	-0.0015529	710.3766619357231	50.926	0.30001	52.32	52.168	52.468	1.3938	-0.0019298	-8.7119E-05	NaN	26.268	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1869800	+		1645	11077	784	791							0.049260559860613284
AQQSRRLFDWL	11	Unmodified	_AQQSRRLFDWL_					0	0	0			REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	REV__nc|ENSG00000172890|Q6IA69-2|NADSYN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	710.378217	1418.74188	0.62185	0.00044175	-2.6567	-0.0018873	-2.0348	-0.0014455	710.3761101911143	50.346	0.26801	52.324	52.159	52.427	1.9772	0.0019298	6.3762E-05	NaN	26.268	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1387700	+		1646	11077	784	791							0.049260559860613284
AQSKLQLDEVL	11	Unmodified	_AQSKLQLDEVL_					0	0	0		tr|A0A7D6ZZF2|A0A7D6ZZF2_9CLOTBaseplateJ/gp47familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20080PE=3SV=1	tr|A0A7D6ZZF2|A0A7D6ZZF2_9CLOTBaseplateJ/gp47familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20080PE=3SV=1	tr|A0A7D6ZZF2|A0A7D6ZZF2_9CLOTBaseplateJ/gp47familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20080PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2338439822197	3	415.234599	1242.68197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.69	1	100.69	100.19	101.19	0								0	0	0	0.63775	1	42152	42152		1.2148	0	1				1647	17209	785	792	2183	2183					0.07033320532150356
AQSKNKGP	8	Unmodified	_AQSKNKGP_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|24|1|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|24|1|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2328674197197	2	415.229959	828.445365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.15	1	101.21	100.71	101.71	0.067009								0	0	0	1.0178	1	42346	42346		4.756	2.1785	1		+		1648	14214	786	793	2184	2184					0.024280585491396778
AQSSARGKP	9	Unmodified	_AQSSARGKP_					0	0	0			REV__ENST00000373839.7_1_1:28733953-28786728:+|nuORF	REV__ENST00000373839.7_1_1:28733953-28786728:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1648742556572	3	301.166519	900.477728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.838	1	62.838	62.338	63.338	0								0	0	0	0.42693	1	26199	26199		1.0715	0.3738	1		+		1649	12699	787	794	2185	2185					0.023508459521394798
AQVPFEQIL	9	Unmodified	_AQVPFEQIL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7903930544853	2	522.78985	1043.56515	1.7996	0.00094083	-0.41926	-0.00021918	1.3804	0.00072165	522.7897016858185	71.734	0.89124	73.075	72.512	73.403	1.3415					85	28	4	0	0	0	0.02878	4	30134	30014;30058;30134;30173		89.401	21.32	1	30726000			1650	4730	788	795	2186;2187;2188;2189	2188					0.04510627103036313
AQVPFEQIL	9	Unmodified	_AQVPFEQIL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7904540896416	2	522.78985	1043.56515	1.4341	0.00074971	-0.90503	-0.00047314	0.52903	0.00027657	522.7896020917626	71.32	0.89718	73.144	72.547	73.445	1.824					68	28	4	0	0	0	0.026734	4	29912	29835;29873;29912;29951		92.653	27.418	1	37467000			1651	4730	788	795	2190;2191;2192;2193	2192					0.04510627103036313
AQVPFEQIL	9	Unmodified	_AQVPFEQIL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	522.78985	1043.56515	1.969	0.0010294	1.5321	0.00080098	3.5012	0.0018304	522.7898087950294	73.092	0.28309	73.092	72.933	73.216	0	-0.011529	0.0021016	NaN	92.653	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559350			1652	4730	788	795							0.04510627103036313
AQVWMYRL	8	Unmodified	_AQVWMYRL_					0	0	0		ENST00000314393.5_1_8:123794011-123875742:+|nuORF	ENST00000314393.5_1_8:123794011-123875742:+|nuORF	ENST00000314393.5_1_8:123794011-123875742:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7817260622978	2	533.778762	1065.54297	1.7688	0.00094416	2.072	0.001106	3.8409	0.0020502	533.7794609064651	71.764	0.53073	73.106	72.779	73.31	1.3415					29	16	2	0	0	0	0.7006	2	30116	30116;30167		30.225	3.3412	1	3402700			1653	5822	789	796	2194;2195	2194					0.012821241536357775
AQVWMYRL	8	Unmodified	_AQVWMYRL_					0	0	0		ENST00000314393.5_1_8:123794011-123875742:+|nuORF	ENST00000314393.5_1_8:123794011-123875742:+|nuORF	ENST00000314393.5_1_8:123794011-123875742:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7816039919853	2	533.778762	1065.54297	1.7146	0.00091521	2.9118	0.0015542	4.6263	0.0024694	533.7807857791979	71.292	0.59401	73.116	72.787	73.381	1.824					43	18	3	0	0	0	0.62161	2	29932	29870;29932		38.151	9.0696	1	2759200			1654	5822	789	796	2196;2197	2197					0.012821241536357775
AQWHEQILV	9	Unmodified	_AQWHEQILV_					0	0	0		ENST00000491911.5_1_9:140508423-140509541:+|nuORF;ENSG00000197070|ENST00000371421|ARRDC1	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	ENST00000491911.5_1_9:140508423-140509541:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.2999145388603	2	562.298373	1122.58219	1.6964	0.00095388	0.7887	0.00044349	2.4851	0.0013974	562.3002205141361	43.207	0.19456	43.53	43.449	43.643	0.32389					8	5	2	0	0	0	0.63129	1	18152	18152		10.074	2.1638	1	308380			1655	4978	790	797	2198	2198					0.02580547708839731
AQWTWDLR	8	Unmodified	_AQWTWDLR_					0	0	0		ENST00000575412.1_1_16:24953198-24955137:-|nuORF	ENST00000575412.1_1_16:24953198-24955137:-|nuORF	ENST00000575412.1_1_16:24953198-24955137:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	359.6993591189384	3	359.182169	1074.52468	-0.76911	-0.00027625	4.4467	0.0015972	3.6776	0.0013209	359.51738975909115	17.228	0.17648	18.126	18.02	18.196	0.89794					7	5	2	0	0	0	2.3239	1	7197	7197		13.906	3.1065	1	134850			1656	7411	791	798	2199	2199					-0.009602944967355143
AQYDELAR	8	Unmodified	_AQYDELAR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2382995486259	2	483.237981	964.461409	0.4745	0.00022929	-0.87579	-0.00042321	-0.40129	-0.00019392	483.23752583742123	16.765	0.21927	17.663	17.538	17.758	0.89794					20	7	3	0	0	0	0.55531	2	6948	6948;6995		43.858	11.553	1	2608400			1657	1724	792	799	2200;2201	2200					-0.022242800046228695
AQYDELAR	8	Unmodified	_AQYDELAR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2376891970634	2	483.237981	964.461409	0.1441	6.9632E-05	0.19819	9.5772E-05	0.34228	0.0001654	483.237973328095	16.532	0.23886	17.835	17.7	17.939	1.3023					17	7	3	0	0	0	0.33907	1	6857	6857		68.081	13.307	1	2339200			1658	1724	792	799	2202	2202					-0.022242800046228695
AQYDELARK	9	Unmodified	_AQYDELARK_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.1928283572197	3	365.192734	1092.55637	-1.1438	-0.0004177	1.4002	0.00051134	0.2564	9.3636E-05	365.1931687523934	13.547	0.21612	14.273	14.163	14.38	0.72639					18	6	4	0	0	0	0.23219	1	5606	5606		29.437	8.8562	1	7168400			1659	1724	793	800	2203	2203					0.013796534665516447
AQYDELARK	9	Unmodified	_AQYDELARK_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2848388552666	2	547.285463	1092.55637	-0.26241	-0.00014362	0.19725	0.00010795	-0.065161	-3.5662E-05	547.2854424863616	13.544	0.12364	14.271	14.194	14.317	0.72639					9	3	3	0	0	0	0.22094	1	5617	5617		32.786	3.7041	1	758210			1660	1724	793	800	2204	2204					0.013796534665516447
AQYDELARK	9	Unmodified	_AQYDELARK_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.1928283572197	3	365.192734	1092.55637	-0.21403	-7.8162E-05	0.35024	0.00012791	0.13621	4.9744E-05	365.1929026084183	13.354	0.1981	14.181	14.063	14.261	0.82789					22	6	5	0	0	0	0.077188	1	5518	5518		57.249	18.634	1	7202900			1661	1724	793	800	2205	2205					0.013796534665516447
AQYDELARK	9	Unmodified	_AQYDELARK_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000402024.2_1_6:116778987-116779080:-|nuORF;ENST00000436075.1_1_22:20837457-20837766:-|nuORF;ENST00000398525.2_1_2:65894186-65894534:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2869140505791	2	547.285463	1092.55637	0.11751	6.4312E-05	0.38781	0.00021224	0.50532	0.00027655	547.2856726545774	13.35	0.13658	14.178	14.093	14.229	0.82788					10	4	3	0	0	0	0.31127	1	5531	5531		26.268	9.1552	1	1022600			1662	1724	793	800	2206	2206					0.013796534665516447
AQYEDIANR	9	Unmodified	_AQYEDIANR_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q8BGZ7	CON__Q922U2;nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2587158083916	2	540.259445	1078.50434	0.31661	0.00017105	-2.3663	-0.0012784	-2.0497	-0.0011074	540.2583205310275	15.612	0.20021	16.438	16.324	16.524	0.82643					40	14	4	0	0	0	0.00020031	2	6506	6469;6506		142.08	90.45	1	15085000		+	1663	343;363	794	801	2207;2208	2208					-0.03177509947204271
AQYEDIANR	9	Unmodified	_AQYEDIANR_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q8BGZ7	CON__Q922U2;nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2573730349541	2	540.259445	1078.50434	0.31438	0.00016985	-2.3283	-0.0012579	-2.0139	-0.001088	540.2580689236177	15.531	0.17305	16.57	16.458	16.631	1.0392					31	12	3	0	0	0	0.0044745	1	6431	6431		123.45	79.678	1	15800000		+	1664	343;363	794	801	2209	2209					-0.03177509947204271
AQYEDIANR	9	Unmodified	_AQYEDIANR_					0	0	0		CON__Q922U2;CON__Q5XQN5;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q8BGZ7	CON__Q922U2;nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2579223513603	2	540.259445	1078.50434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.603	1	16.642	16.142	17.142	1.0392								0	0	0	0.053101	1	6473	6473		43.772	24.515	1			+	1665	343;363	794	801	2210	2210					-0.03177509947204271
AQYEDIAQKS	10	Unmodified	_AQYEDIAQKS_					0	0	0		ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.2830078005791	2	576.78021	1151.54587	0.24322	0.00014028	1.8359	0.0010589	2.0791	0.0011992	577.2828750856245	15.787	0.15518	15.917	15.839	15.994	0.13022					7	4	2	0	0	0	0.69361	1	6562	6562		18.721	8.5707	1	393450		+	1666	3993	795	802	2211	2211					-0.023843739785206708
AQYEDIAQKS	10	Unmodified	_AQYEDIAQKS_					0	0	0		ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	576.78021	1151.54587	0.53304	0.00030745	0.52289	0.00030159	1.0559	0.00060904	576.7802501915197	15.853	0.12478	15.853	15.745	15.87	0	-0.03194	-0.00062693	NaN	18.721	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	269910		+	1667	3993	795	802							-0.023843739785206708
AQYNNNNN	8	Unmodified	_AQYNNNNN_					0	0	0			REV__nc|ENSG00000064692|Q9Y6H5-5|SNCAIP	REV__nc|ENSG00000064692|Q9Y6H5-5|SNCAIP	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1990539431572	2	476.199387	950.384222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.096	1	76.096	75.596	76.596	0								0	0	0	1.0178	1	31675	31675		5.2307	2.6532	1		+		1668	8663	796	803	2212	2212					-0.09295498220956233
ARAASSGG	8	Unmodified	_ARAASSGG_					0	0	0			REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.6725952029228	2	338.672277	675.330001	-1.5103	-0.00051151	3.4279	0.0011609	1.9176	0.00064943	338.67332342852626	76.984	1.1596	76.984	76.373	77.533	0					77	36	4	0	0	0	0.88055	1	32028	32028		8.5933	0	1	2788900	+		1669	13102	797	804	2213	2213					-0.020650455818440605
ARAASSGG	8	Unmodified	_ARAASSGG_					0	0	0			REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.6731140017509	2	338.672277	675.330001	1.2173	0.00041225	0.17199	5.8247E-05	1.3892	0.0004705	338.672476824883	75.91	1.4111	77.203	76.634	78.045	1.2938					130	45	5	0	0	0	0.88055	1	31750	31750		8.5933	0	1	56369000	+		1670	13102	797	804	2214	2214					-0.020650455818440605
ARAASSGG	8	Unmodified	_ARAASSGG_					0	0	0			REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	REV__ENST00000445369.2_1_16:3063604-3064486:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	338.672277	675.330001	1.2173	0.00041225	0.17199	5.8247E-05	1.3892	0.0004705	338.672476824883	75.91	1.4111	77.203	76.634	78.045	1.2938	0.1098	-0.0011233	NaN	8.5933	130	45	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56369000	+		1671	13102	797	804							-0.020650455818440605
ARAGLVCPDE	10	Unmodified	_ARAGLVCPDE_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.1714050173759	3	344.171053	1029.49133	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.95	1	66.274	65.774	66.774	0.32449								0	0	0	0.66227	1	27612	27612		0.62683	0.22611	1				1672	16271	798	805	2215	2215					-0.022236643309497595
ARALRQAA	8	Unmodified	_ARALRQAA_					0	0	0		ENST00000453707.6_1_X:71525187-71526923:-|nuORF	ENST00000453707.6_1_X:71525187-71526923:-|nuORF	ENST00000453707.6_1_X:71525187-71526923:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	428.7597228884697	2	428.759218	855.503883	2.3977	0.001028	-1.393	-0.00059727	1.0047	0.00043075	428.7584350107954	81.31	0.48492	81.6	81.369	81.854	0.29056					36	15	3	0	0	0	0.89051	1	33971	33971		2.3027	0	1	7014600			1673	6631	799	806	2216	2216					0.07035159914266842
ARGPGLTA	8	Unmodified	_ARGPGLTA_					0	0	0		ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	742.4196044802666	1	742.420614	741.413337	1.3662	0.0010143	-3.3196	-0.0024645	-1.9534	-0.0014502	742.4180835456535	103.42	0.099075	103.42	103.37	103.46	0					10	4	4	0	0	0	0.89051	1	43396	43396		2.3027	0	1	68641000			1674	7271	800	807	2217	2217					0.03228690865989847
ARGPGLTA	8	Unmodified	_ARGPGLTA_					0	0	0		ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	742.420614	741.413337	2.7204	0.0020197	-4.2196	-0.0031327	-1.4992	-0.0011131	742.4173776791156	103.39	0.12342	103.45	103.42	103.54	0.059502	-0.027521	-0.00021958	NaN	2.3027	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126050000			1675	7271	800	807							0.03228690865989847
ARGPGLTA	8	Unmodified	_ARGPGLTA_					0	0	0		ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	742.420614	741.413337	2.4709	0.0018345	-5.6704	-0.0042098	-3.1995	-0.0023754	742.4163809958069	103.36	0.091263	103.53	103.49	103.58	0.16445	0.048832	-0.0012967	NaN	2.3027	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	539900000			1676	7271	800	807							0.03228690865989847
ARGPGLTA	8	Unmodified	_ARGPGLTA_					0	0	0		ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	ENST00000551964.5_2_12:99039219-99039444:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	742.420614	741.413337	2.6957	0.0020013	-5.2862	-0.0039246	-2.5905	-0.0019232	742.4166101341988	103.34	0.13129	103.52	103.47	103.6	0.18066	0.039851	-0.0010114	NaN	2.3027	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385890000			1677	7271	800	807							0.03228690865989847
ARGWRGAECH	10	Unmodified	_ARGWRGAECH_					0	0	0			REV__ENST00000493504.1_1_19:59086872-59092651:+|nuORF	REV__ENST00000493504.1_1_19:59086872-59092651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5117675662041	3	381.513925	1141.51994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.768	1	24.768	24.268	25.268	0								0	0	0	0.64916	1	10333	10333		14.957	0.55178	1		+		1678	13448	801	808	2218	2218					-0.045155019111462025
ARGWRGAECH	10	Unmodified	_ARGWRGAECH_					0	0	0			REV__ENST00000493504.1_1_19:59086872-59092651:+|nuORF	REV__ENST00000493504.1_1_19:59086872-59092651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5128051638603	3	381.513925	1141.51994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.386	1	27.386	26.886	27.886	0								0	0	0	0.64065	1	11452	11452		19.626	6.0111	1		+		1679	13448	801	808	2219	2219					-0.045155019111462025
ARHLGKPDP	9	Unmodified	_ARHLGKPDP_					0	0	0		ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7773620486259	2	495.777608	989.540663	1.8316	0.00090807	-3.0311	-0.0015028	-1.1995	-0.0005947	495.77530745454305	48.925	0.43092	50.902	50.637	51.068	1.9772					24	13	2	0	0	0	0.59203	1	20474	20474		11.64	1.4569	1	1754100			1680	4762	802	809	2220	2220					0.045474117401681724
ARHRTEARLR	10	Unmodified	_ARHRTEARLR_					0	0	0			REV__PLEKHM3|p.Q442H|1|0.15|ENSG00000178385|chr2:207976871-207976871|C/G|missense_variant	REV__PLEKHM3|p.Q442H|1|0.15|ENSG00000178385|chr2:207976871-207976871|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5842162966728	3	422.581438	1264.72248	1.157	0.00048893	2.1314	0.00090068	3.2884	0.0013896	422.582359893431	81.718	1.5156	81.718	80.977	82.493	0					71	49	3	0	0	0	0.89803	1	34180	34180		0.62683	0.063655	1	2207800	+		1681	14600	803	810	2221	2221					0.10071144485755212
ARILVPSLLPR	11	Unmodified	_ARILVPSLLPR_					0	0	0		ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	309.5244933962822	4	309.455308	1233.79213	-0.052023	-1.6099E-05	0.37427	0.00011582	0.32224	9.972E-05	309.4554387899015	22.795	0.76595	24.01	23.799	24.565	1.2145					58	24	3	0	0	0	0.14606	1	9667	9667		0.36667	0.037403	1	2811200			1682	5495	804	811	2222	2222					0.18458210381822937
ARILVPSLLPR	11	Unmodified	_ARILVPSLLPR_					0	0	0		ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	309.455308	1233.79213	0.10833	3.3524E-05	1.046	0.0003237	1.1544	0.00035723	309.4552551984321	23.97	0.33907	24.212	24.073	24.412	0.24251	0.13588	0.0013885	NaN	0.36667	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2245900			1683	5495	804	811							0.18458210381822937
ARILVPSLLPR	11	Unmodified	_ARILVPSLLPR_					0	0	0		ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	309.455308	1233.79213	-0.17271	-5.3446E-05	-1.7809	-0.0005511	-1.9536	-0.00060454	309.4550024776358	22.391	0.49052	24.007	23.706	24.196	1.6158	-0.069271	-0.0021107	NaN	0.36667	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2422900			1684	5495	804	811							0.18458210381822937
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5928832888603	3	422.591163	1264.75166	0.65775	0.00027796	2.8907	0.0012216	3.5484	0.0014995	422.5923175269455	36.75	0.48708	36.75	36.584	37.071	0					56	24	3	0	0	0	0.87762	1	15404	15404		3.8763	0.28927	1	8115700	+		1685	8169	805	812	2223	2223					0.12987288782073847
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5933410525322	3	422.591163	1264.75166	0.67704	0.00028611	3.1362	0.0013253	3.8133	0.0016114	422.59229849815495	37.267	0.50903	37.267	36.985	37.494	0					53	25	3	0	0	0	0.87762	1	15652	15652		3.8763	0.28927	1	5841400	+		1686	8169	805	812	2224	2224					0.12987288782073847
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5923339724541	3	422.591163	1264.75166	1.7704	0.00074815	2.1761	0.00091959	3.9465	0.0016677	422.59194267234966	36.503	0.52721	36.805	36.518	37.045	0.30197					60	37	2	0	0	0	0.89588	1	15372	15372		1.9064	0.1641	1	4810300	+		1687	8169	805	812	2225	2225					0.12987288782073847
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1961852908134	4	317.195191	1264.75166	0.7908	0.00025084	1.75	0.0005551	2.5408	0.00080594	317.19560125039726	36.489	0.63893	36.79	36.544	37.183	0.30197					150	45	4	0	0	0	0.89588	1	15407	15407		1.9064	0.1641	1	36396000	+		1688	8169	805	812	2226	2226					0.12987288782073847
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1956359744072	4	317.195191	1264.75166	0.13675	4.3377E-05	1.7639	0.00055951	1.9007	0.00060288	317.19563218135227	34.331	0.42652	36.153	35.864	36.291	1.8227					89	43	3	0	0	0	0.88278	1	14307	14307		3.3196	0.68841	1	38415000	+		1689	8169	805	812	2227	2227					0.12987288782073847
ARKIQPRFIH	10	Unmodified	_ARKIQPRFIH_					0	0	0			REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	REV__BOD1|p.E150K|1|0.29|ENSG00000145919|chr5:173609349-173609349|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1956970095634	4	317.195191	1264.75166	1.3799	0.00043768	2.7756	0.00088042	4.1555	0.0013181	317.195898574588	40.423	1.3769	42.286	41.584	42.961	1.8624					128	43	4	0	0	0	0.87762	3	16910	16910;17063;17110		3.8763	0.28927	1	5336400	+		1690	8169	805	812	2228;2229;2230	2228					0.12987288782073847
ARKQVARRART	11	Unmodified	_ARKQVARRART_					0	0	0			REV__ENSG00000102401|ENST00000471229|ARMCX3	REV__ENSG00000102401|ENST00000471229|ARMCX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2726623415947	3	438.272604	1311.79598	1.1777	0.00051617	-0.45333	-0.00019868	0.7244	0.00031749	438.27229773511937	95.932	0.31647	95.932	95.746	96.063	0					37	10	5	0	0	0	1.0365	1	40122	40122		1.2148	0.588	1	57924000	+		1691	8143	806	813	2231	2231					0.15255692928258213
ARLARRRPR	9	Unmodified	_ARLARRRPR_					0	0	0			REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1532165408134	3	384.583002	1150.72718	0.49103	0.00018884	-2.2355	-0.00085974	-1.7445	-0.00067089	384.5818783408671	22.931	0.64624	24.146	23.919	24.565	1.2145					60	20	5	0	0	0	0.11941	1	9498	9498		1.0715	0	1	12053000	+		1692	14563	807	814	2232	2232					0.15784073419217748
ARLARRRPR	9	Unmodified	_ARLARRRPR_					0	0	0			REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1532165408134	3	384.583002	1150.72718	0.43539	0.00016744	-1.7299	-0.0006653	-1.2945	-0.00049785	384.58207595667614	22.441	0.5606	23.618	23.35	23.911	1.177					65	17	5	0	0	0	0.11941	1	9498	9498		1.0715	0	1	15822000	+		1693	14563	807	814	2233	2233					0.15784073419217748
ARLARRRPR	9	Unmodified	_ARLARRRPR_					0	0	0			REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	384.583002	1150.72718	-0.9649	-0.00037108	-0.43445	-0.00016708	-1.3993	-0.00053816	384.582666583853	24.036	0.64774	24.036	23.688	24.335	0	0.019436	0.0012365	NaN	1.0715	77	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11513000	+		1694	14563	807	814							0.15784073419217748
ARLARRRPR	9	Unmodified	_ARLARRRPR_					0	0	0			REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	REV__nc|ENSG00000277200|A0A8I5KY20|CCDC92B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	384.583002	1150.72718	0.26141	0.00010053	-1.9172	-0.00073733	-1.6558	-0.00063679	384.5819491499059	21.963	0.59647	23.579	23.322	23.918	1.6158	-0.019769	-0.00011656	NaN	1.0715	73	19	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14956000	+		1695	14563	807	814							0.15784073419217748
ARLKGTGG	8	Unmodified	_ARLKGTGG_					0	0	0			REV__ENST00000539361.1_1_11:61551728-61551962:+|nuORF	REV__ENST00000539361.1_1_11:61551728-61551962:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2286559939384	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.744	1	94.615	94.115	95.115	0.87176								0	0	0	1.0178	1	39448	39448		0.69038	0	1		+		1696	13773	808	815	2234	2234					0.05100379757345763
ARLKRELV	8	Unmodified	_ARLKRELV_					0	0	0		CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.8223449587822	2	492.819276	983.623999	3.424	0.0016874	3.3248	0.0016385	6.7488	0.0033259	492.8206062338768	101.65	0.15543	101.72	101.61	101.76	0.067009					7	4	2	0	0	0	0.89008	1	42566	42566		2.5775	0	1	2943600			1697	387	809	816	2235	2235					0.1315314818804154
ARLKRELV	8	Unmodified	_ARLKRELV_					0	0	0		CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	492.819276	983.623999	0.95907	0.00047265	1.9079	0.00094024	2.867	0.0014129	492.81999866343335	101.67	0.15109	101.67	101.56	101.71	0	-0.041786	-0.0011994	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2293300			1698	387	809	816							0.1315314818804154
ARLKRELV	8	Unmodified	_ARLKRELV_					0	0	0		CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	492.819276	983.623999	3.1745	0.0015644	5.7436	0.0028305	8.918	0.004395	492.8219426871751	101.58	0.12776	101.75	101.67	101.8	0.17032	0.043867	0.0025812	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	499470			1699	387	809	816							0.1315314818804154
ARLKRELV	8	Unmodified	_ARLKRELV_					0	0	0		CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	CUX1|p.D14V|1|0.39|ENSG00000257923|chr7:101916125-101916125|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	492.819276	983.623999	3.3663	0.001659	4.9493	0.0024391	8.3156	0.0040981	492.82113559363813	101.51	0.12595	101.7	101.62	101.75	0.19076	-0.010094	0.0017983	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807540			1700	387	809	816							0.1315314818804154
ARLMLRIYLIK	11	Unmodified	_ARLMLRIYLIK_					0	0	0		nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3;nc|ENSG00000164796|Q7Z407-4|CSMD3	nc|ENSG00000164796|Q7Z407-3|CSMD3	nc|ENSG00000164796|Q7Z407-3|CSMD3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	348.2020751833916	4	348.224526	1388.869	1.192	0.00041507	0.36404	0.00012677	1.556	0.00054184	348.2237874025323	68.305	0.12332	68.628	68.534	68.657	0.32224					5	3	2	0	0	0	0.14606	1	28565	28565		0	0	1	94091			1701	3797	810	817	2236	2236					0.19011685606687934
ARLMRPVRAVP	11	Unmodified	_ARLMRPVRAVP_					0	0	0		ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	ENST00000046640.7_1_17:3540070-3540534:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1974365115166	4	317.196034	1264.75503	1.0997	0.00034881	1.537	0.00048754	2.6367	0.00083636	317.19645935195933	42.685	1.6146	43.006	42.374	43.988	0.32058					109	52	3	0	0	0	1.0365	1	17838	17838		1.2148	0.20126	1	3644000			1702	5498	811	818	2237	2237					0.13324215564421138
ARLQRGARRSP	11	Unmodified	_ARLQRGARRSP_					0	0	0			REV__ENST00000533805.5_1_11:75159628-75160980:-|nuORF	REV__ENST00000533805.5_1_11:75159628-75160980:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2522155642509	3	423.253321	1266.73813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.55	1	116.55	116.05	117.05	0								0	0	0	0.63775	1	50272	50272		1.1098	0.48293	1		+		1703	13729	812	819	2238	2238					0.11543431002837679
ARLQRGARRSP	11	Unmodified	_ARLQRGARRSP_					0	0	0			REV__ENST00000533805.5_1_11:75159628-75160980:-|nuORF	REV__ENST00000533805.5_1_11:75159628-75160980:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2527343630791	3	423.253321	1266.73813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.77	1	118.77	118.27	119.27	0								0	0	0	0.63775	1	51166	51166		2.4348	1.808	1		+		1704	13729	812	819	2239	2239					0.11543431002837679
ARLRAAETLAR	11	Unmodified	_ARLRAAETLAR_					0	0	0			REV__ENST00000340622.7_1_7:149191544-149194826:-|nuORF	REV__ENST00000340622.7_1_7:149191544-149194826:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	409.5808898806572	3	409.914194	1226.72075	0.74108	0.00030378	2.6832	0.0010999	3.4242	0.0014036	409.9156093367951	92.578	0.30065	92.578	92.53	92.831	0					12	9	2	0	0	0	0.14606	1	38764	38764		0.84494	0	1	1171700	+		1705	12491	813	820	2240	2240					0.11646090677186294
ARLRHIKRLR	10	Unmodified	_ARLRHIKRLR_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000569930.1_1_16:2133412-2138608:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.4708740115166	4	330.471824	1317.85819	0.56057	0.00018525	-1.6039	-0.00053005	-1.0434	-0.0003448	330.4713022817203	48.369	1.0916	49.757	48.895	49.987	1.388					66	34	3	0	0	0	0.89803	1	20191	20191		0.15932	0.064481	1	1542500			1706	1421	814	821	2241	2241					0.21197464067267902
ARLRHIKRLR	10	Unmodified	_ARLRHIKRLR_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000569930.1_1_16:2133412-2138608:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	330.471824	1317.85819	-1.6147	-0.00053363	0.31604	0.00010444	-1.2987	-0.00042919	330.4717100130099	50.02	0.84431	50.02	49.593	50.437	0	0.13176	0.0014708	NaN	0.15932	40	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	990760			1707	1421	814	821							0.21197464067267902
ARLTILPISR	10	Unmodified	_ARLTILPISR_					0	0	0		nc|ENSG00000120645|Q9UPP2-2|IQSEC3	nc|ENSG00000120645|Q9UPP2-2|IQSEC3	nc|ENSG00000120645|Q9UPP2-2|IQSEC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.1814453005791	3	380.580152	1138.71863	-0.43318	-0.00016486	1.3423	0.00051084	0.90908	0.00034598	380.5808379855859	67.866	0.287	67.866	67.789	68.076	0					11	8	2	0	0	0	0.12552	1	28315	28315		3.0723	0	1	298920			1708	7859	815	822	2242	2242					0.15481661939361402
ARLVKKKALHA	11	Unmodified	_ARLVKKKALHA_					0	0	0		tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.9005920290947	4	309.458116	1233.80336	0.75293	0.000233	-1.7371	-0.00053756	-0.98416	-0.00030456	309.457335841051	69.006	0.28148	69.328	69.157	69.438	0.32224					9	8	2	0	0	0	0.14606	1	28896	28896		0	0	1	204000			1709	16685	816	823	2243	2243					0.19581032476003202
ARLVKKKALHA	11	Unmodified	_ARLVKKKALHA_					0	0	0		tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	tr|A0A553SU86|A0A553SU86_NIACIBlaI/MecI/CopYfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06545PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	309.458116	1233.80336	-2.4233	-0.0007499	-0.27125	-8.394E-05	-2.6945	-0.00083384	309.45797400669886	69.33	0.15483	69.33	69.265	69.42	0	0.00078903	0.0007754	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	119190			1710	16685	816	823							0.19581032476003202
ARLVLKSKNG	10	Unmodified	_ARLVLKSKNG_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;ENSG00000162365|ENST00000371891|CYP4A22	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2540161013603	3	362.564502	1084.67168	-0.60921	-0.00022088	0.76418	0.00027707	0.15498	5.6189E-05	362.56474888632647	81.38	0.27324	81.38	81.195	81.469	0					14	8	2	0	0	0	0.1256	1	33874	33874		0.13989	0	1	534680			1711	3612	817	824	2244	2244					0.13272802388246419
ARLWDHKKKK	10	Unmodified	_ARLWDHKKKK_					0	0	0		ENST00000529974.1_1_11:88068229-88070878:-|nuORF	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2687866091728	3	437.266568	1308.77787	1.9315	0.00084459	2.1763	0.00095164	4.1079	0.0017962	437.26738171747036	37.068	0.47281	37.373	37.136	37.609	0.30497					32	21	2	0	0	0	0.88031	1	15571	15571		3.5871	2.2574	1	1783900			1712	7158	818	825	2245	2245					0.13583557953506897
ARLWDHKKKK	10	Unmodified	_ARLWDHKKKK_					0	0	0		ENST00000529974.1_1_11:88068229-88070878:-|nuORF	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	ENST00000529974.1_1_11:88068229-88070878:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	437.266568	1308.77787	0.46464	0.00020317	1.3241	0.000579	1.7888	0.00078217	437.26743474804977	35.963	0.25529	37.239	37.128	37.383	1.2762	-0.066682	-0.00082227	NaN	3.5871	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557410			1713	7158	818	825							0.13583557953506897
ARMELFLYFT	10	Unmodified	_ARMELFLYFT_					0	0	0		nc|ENSG00000290611|Q6ZSU1|CYP2G1P	nc|ENSG00000290611|Q6ZSU1|CYP2G1P	nc|ENSG00000290611|Q6ZSU1|CYP2G1P	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8902770876884	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.214	1	96.319	95.819	96.819	0.105								0	0	0	0.66218	1	40264	40264		0.77653	0.27058	1				1714	8019	819	826	2246	2246					0.014592008395084122
ARNRIKKKKRH	11	Unmodified	_ARNRIKKKKRH_					0	0	0			REV__ENST00000312438.7_1_11:67134982-67141182:-|nuORF	REV__ENST00000312438.7_1_11:67134982-67141182:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.2020751833916	4	359.486468	1433.91677	-0.91964	-0.0003306	-1.4756	-0.00053047	-2.3953	-0.00086107	359.737375904452	42.359	0.19054	42.359	42.257	42.447	0					7	5	2	0	0	0	0.14606	1	17737	17737		0.08335	0	1	235670	+		1715	12372	820	827	2247	2247					0.21716520641712123
ARNRIKKKKRH	11	Unmodified	_ARNRIKKKKRH_					0	0	0			REV__ENST00000312438.7_1_11:67134982-67141182:-|nuORF	REV__ENST00000312438.7_1_11:67134982-67141182:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	359.486468	1433.91677	1.1177	0.00040179	-7.0698	-0.0025415	-5.9521	-0.0021397	359.4838363513051	40.884	0.15756	42.21	42.084	42.241	1.3254	-0.074613	-0.0036399	NaN	0.08335	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172590	+		1716	12372	820	827							0.21716520641712123
ARPFYWAGA	9	Unmodified	_ARPFYWAGA_					0	0	0			REV__nc|ENSG00000170703|Q8N841-4|TTLL6	REV__nc|ENSG00000170703|Q8N841-4|TTLL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.8434631228447	3	346.843376	1037.5083	0.8918	0.00030931	-0.87499	-0.00030349	0.016802	5.8277E-06	346.8433385468118	77.633	0.39077	79.385	79.231	79.622	1.7514					36	12	5	0	0	0	0.76456	1	32600	32600		2.7352	0	1	2541100	+		1717	14487	821	828	2248	2248					-0.00895375662821607
ARPMTWLFSTR	11	Unmodified	_ARPMTWLFSTR_					0	0	0			REV__chr17:28747264-28748017|119|11.13|0.23|5.62|+|1|TRAF4,TRAF4|1	REV__chr17:28747264-28748017|119|11.13|0.23|5.62|+|1|TRAF4,TRAF4|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2449523806572	3	455.908052	1364.70233	0.87775	0.00040017	3.1687	0.0014447	4.0465	0.0018448	456.2441669268391	25.841	0.30537	27.558	27.427	27.732	1.7167					16	9	2	0	0	0	1.0282	1	10809	10809		0.84494	0.39042	1	835190	+		1718	8270	822	829	2249	2249					0.034562127109438734
ARPRISSRAL	10	Unmodified	_ARPRISSRAL_					0	0	0		ENST00000485071.2_1_7:100172857-100173304:-|nuORF	ENST00000485071.2_1_7:100172857-100173304:-|nuORF	ENST00000485071.2_1_7:100172857-100173304:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2357360720634	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.676	1	62.642	62.142	63.142	1.9653								0	0	0	0.66082	1	25460	25460		3.0723	0.57378	1				1719	6853	823	830	2250	2250					0.11526436476992785
ARQFKVAR	8	Unmodified	_ARQFKVAR_					0	0	0			REV__ENSG00000114391|ENST00000394077|RPL24	REV__ENSG00000114391|ENST00000394077|RPL24	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2998840212822	2	488.295968	974.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.019	1	24.261	23.761	24.761	0.24251								0	0	0	1.0178	1	10018	10018		4.756	0.42677	1		+		1720	9406	824	831	2251	2251					0.08907708356753119
ARQFKVAR	8	Unmodified	_ARQFKVAR_					0	0	0			REV__ENSG00000114391|ENST00000394077|RPL24	REV__ENSG00000114391|ENST00000394077|RPL24	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2970153689384	2	488.295968	974.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.146	1	17.185	16.685	17.685	1.0392								0	0	0	1.0178	1	6702	6702		4.756	0.42677	1		+		1721	9406	824	831	2252	2252					0.08907708356753119
ARQVHIRRQRR	11	Unmodified	_ARQVHIRRQRR_					0	0	0			REV__ENST00000396426.7_1_22:42373013-42377694:+|nuORF	REV__ENST00000396426.7_1_22:42373013-42377694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	738.4510986208916	2	738.448166	1474.88178	2.5795	0.0019048	0.66498	0.00049106	3.2444	0.0023959	738.4489403695005	88.845	1.1799	89.068	88.436	89.615	0.22359					79	36	3	0	0	0	1.0395	2	37222	37222;37274		0.30703	0	1	1373800	+		1722	12848	825	832	2253;2254	2253					0.1633327783376899
ARQVHIRRQRR	11	Unmodified	_ARQVHIRRQRR_					0	0	0			REV__ENST00000396426.7_1_22:42373013-42377694:+|nuORF	REV__ENST00000396426.7_1_22:42373013-42377694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.6359435915947	3	492.634536	1474.88178	3.2872	0.0016194	0.41141	0.00020268	3.6987	0.0018221	492.63459499693073	88.807	1.3038	89.03	88.375	89.679	0.22359					105	40	3	0	0	0	1.0395	3	37231	37231;37326;37378		0.08335	0	1	2745400	+		1723	12848	825	832	2255;2256;2257	2255					0.1633327783376899
ARRERPSRII	10	Unmodified	_ARRERPSRII_					0	0	0		ENST00000182527.3_1_6:52367444-52367987:-|nuORF	ENST00000182527.3_1_6:52367444-52367987:-|nuORF	ENST00000182527.3_1_6:52367444-52367987:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	313.6924926638603	4	314.194185	1252.74764	0.093741	2.9453E-05	-0.98224	-0.00030861	-0.8885	-0.00027916	314.1939940000434	28.998	0.36239	30.797	30.657	31.02	1.7987					28	11	3	0	0	0	0.12557	1	12125	12125		1.5923	0.37745	1	4083600			1724	5506	826	833	2258	2258					0.13137199288371448
ARRGKRRITW	10	Unmodified	_ARRGKRRITW_					0	0	0			REV__ENST00000330115.3_1_3:194349151-194354396:-|nuORF	REV__ENST00000330115.3_1_3:194349151-194354396:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3967773318291	2	650.397079	1298.7796	2.4864	0.0016171	-2.4113	-0.0015683	0.075116	4.8855E-05	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	0.89803	1	33857	33857		1.6526	0.17072	1	5912000	+		1725	12441	827	834	2259	2259					0.1421661176214002
ARRKREHDK	9	Unmodified	_ARRKREHDK_					0	0	0		ENSG00000206530|ENST00000393845|CFAP44;nc|ENSG00000206530|Q96MT7-1|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.2522155642509	3	399.230405	1194.66939	0.57709	0.00023039	-2.8216	-0.0011265	-2.2446	-0.0008961	399.22856066274136	27.702	0.36996	29.477	29.264	29.634	1.7754					15	11	2	0	0	0	0.11941	1	11650	11650		1.0715	0	1	361340			1726	5198	828	835	2260	2260					0.0798376670311427
ARRKRKKHR	9	Unmodified	_ARRKRKKHR_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;TAF1L|p.I1514Qfs*6|1|0.03|ENSG00000122728|chr9:32631039-32631040|AT/-|frameshift_variant;TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.5245239138603	4	309.706257	1234.79592	-2.9735	-0.0009209	2	0.00061942	-0.97347	-0.00030149	309.7061182949007	24.657	0.51914	24.657	24.461	24.98	0					18	16	2	0	0	0	0.11944	1	10213	10213		0.20686	0.13359	1	505970			1727	2166	829	836	2261	2261					0.18791737718925106
ARRKWIHRD	9	Unmodified	_ARRKWIHRD_					0	0	0		ENST00000478440.1_1_2:182339705-182343590:+|nuORF	ENST00000478440.1_1_2:182339705-182343590:+|nuORF	ENST00000478440.1_1_2:182339705-182343590:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	619.3544799685478	2	619.35488	1236.69521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.12	109.62	110.62	0								0	0	0	0.42693	1	47682	47682		0	0	1				1728	6804	830	837	2262	2262					0.08632660945386306
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2212097048759	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.823	1	85.823	85.323	86.323	0								0	0	0	0.63775	1	35759	35759		1.0136	0.1492	1		+		1729	10234	831	838	2263	2263					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2234069705009	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.953	1	85.953	85.453	86.453	0								0	0	0	0.63775	1	35812	35812		1.1098	0.14748	1		+		1730	10234	831	838	2264	2264					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2237426638603	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.526	1	86.526	86.026	87.026	0								0	0	0	0.63775	1	36059	36059		1.1098	0.14748	1		+		1731	10234	831	838	2265	2265					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2248107790947	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.004	1	88.004	87.504	88.504	0								0	0	0	0.63775	1	36787	36787		1.3296	0.1363	1		+		1732	10234	831	838	2266	2266					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2237426638603	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.664	1	89.664	89.164	90.164	0								0	0	0	0.63775	1	37478	37478		1.1098	0.14748	1		+		1733	10234	831	838	2267	2267					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2241393923759	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.839	1	89.839	89.339	90.339	0								0	0	0	0.63775	1	37551	37551		1.1098	0.14748	1		+		1734	10234	831	838	2268	2268					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2241088747978	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.202	1	90.202	89.702	90.702	0								0	0	0	0.63775	1	37698	37698		1.1098	0.14748	1		+		1735	10234	831	838	2269	2269					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2232543826103	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.369	1	84.629	84.129	85.129	0.26083								0	0	0	0.63775	1	35285	35285		1.1098	0.33322	1		+		1736	10234	831	838	2270	2270					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2245666384697	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.536	1	84.797	84.297	85.297	0.26083								0	0	0	0.63775	1	35353	35353		1.1098	0.41209	1		+		1737	10234	831	838	2271	2271					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2233459353447	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.948	1	85.209	84.709	85.709	0.26083								0	0	0	0.63775	1	35521	35521		1.1098	0.41209	1		+		1738	10234	831	838	2272	2272					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2233154177666	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.078	1	85.332	84.832	85.832	0.25484								0	0	0	0.63775	1	35574	35574		1.3296	0.55311	1		+		1739	10234	831	838	2273	2273					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2232238650322	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.359	1	85.611	85.111	86.111	0.25227								0	0	0	0.63775	1	35693	35693		1.3296	0.55311	1		+		1740	10234	831	838	2274	2274					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2238036990166	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.056	1	86.308	85.808	86.808	0.25227								0	0	0	0.63775	1	35985	35985		1.1098	0.33322	1		+		1741	10234	831	838	2275	2275					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2241088747978	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.171	1	86.423	85.923	86.923	0.25227								0	0	0	0.63775	1	36035	36035		1.2148	0.4383	1		+		1742	10234	831	838	2276	2276					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2240173220634	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.293	1	86.537	86.037	87.037	0.24387								0	0	0	0.63775	1	36087	36087		1.1098	0.41209	1		+		1743	10234	831	838	2277	2277					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2242309451103	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.773	1	88.007	87.507	88.507	0.23471								0	0	0	0.63775	1	36804	36804		1.1098	0.14748	1		+		1744	10234	831	838	2278	2278					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2239562869072	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.814	1	89.037	88.537	89.537	0.22359								0	0	0	0.63775	1	37234	37234		1.1098	0.14748	1		+		1745	10234	831	838	2279	2279					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2230712771416	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.97	1	89.194	88.694	89.694	0.22359								0	0	0	0.63775	1	37297	37297		1.3296	0.1363	1		+		1746	10234	831	838	2280	2280					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2238647341728	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.359	1	89.582	89.082	90.082	0.22359								0	0	0	0.63775	1	37454	37454		1.1098	0.14748	1		+		1747	10234	831	838	2281	2281					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2247192263603	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.654	1	89.878	89.378	90.378	0.22359								0	0	0	0.63775	1	37574	37574		1.1098	0.14748	1		+		1748	10234	831	838	2282	2282					0.06118702794992714
ARRLAAEEASL	11	Unmodified	_ARRLAAEEASL_					0	0	0			REV__nc|ENSG00000144045|Q8TE96-2|DQX1	REV__nc|ENSG00000144045|Q8TE96-2|DQX1	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2235290408134	3	396.222805	1185.64658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.868	1	86.027	85.527	86.527	1.159								0	0	0	0.63775	1	35612	35612		1.3296	0.1363	1		+		1749	10234	831	838	2283	2283					0.06118702794992714
ARRQRTRDQ	9	Unmodified	_ARRQRTRDQ_					0	0	0		ENST00000343889.8_1_1:2411150-2434522:+|nuORF;nc|ENSG00000149527|O75038-2|PLCH2;PLCH2|p.S1145Pfs*53|1|0.17|ENSG00000149527|chr1:2504393-2504393|C/-|frameshift_variant;nc|ENSG00000149527|O75038-4|PLCH2;nc|ENSG00000149527|O75038-3|PLCH2;ENSG00000149527|ENST00000378486|PLCH2	ENST00000343889.8_1_1:2411150-2434522:+|nuORF	ENST00000343889.8_1_1:2411150-2434522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2229797244072	3	396.22191	1185.6439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.711	1	85.711	85.211	86.211	0								0	0	0	0.42693	1	35711	35711		1.1933	0	1				1750	3243	832	839	2284	2284					0.058502921807075836
ARRRFFRLLKW	11	Unmodified	_ARRRFFRLLKW_					0	0	0			REV__ENST00000497791.5_1_3:124456468-124456537:+|nuORF	REV__ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2411071658134	4	387.990115	1547.93135	0.56159	0.00021789	0.84811	0.00032906	1.4097	0.00054695	387.9905208889514	35.839	0.69927	37.657	37.419	38.118	1.8176					134	42	4	0	0	0	1.0402	1	14987	14987		0.094841	0.094841	1	18143000	+		1751	13481	833	840	2285	2285					0.1793059278986675
ARRRFFRLLKW	11	Unmodified	_ARRRFFRLLKW_					0	0	0			REV__ENST00000497791.5_1_3:124456468-124456537:+|nuORF	REV__ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1334411501884	5	310.593547	1547.93135	0.07796	2.4214E-05	0.091754	2.8498E-05	0.16971	5.2712E-05	310.59345747984094	36.833	0.40681	38.65	38.466	38.873	1.8176					60	24	3	0	0	0	0.14606	1	15445	15445		0	0	1	10457000	+		1752	13481	833	840	2286	2286					0.1793059278986675
ARRRKPLMPV	10	Unmodified	_ARRRKPLMPV_					0	0	0			REV__ENST00000492321.5_1_7:44118242-44122109:-|nuORF	REV__ENST00000492321.5_1_7:44118242-44122109:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	307.1150390505791	4	306.693393	1222.74446	0.16742	5.1347E-05	1.0302	0.00031596	1.1976	0.00036731	306.69358424465605	31.997	0.31782	33.821	33.577	33.895	1.8246					15	11	2	0	0	0	0.1256	1	13324	13324		0	0	1	757930	+		1753	13438	834	841	2287	2287					0.14200232909979604
ARRRKPLMPV	10	Unmodified	_ARRRKPLMPV_					0	0	0			REV__ENST00000492321.5_1_7:44118242-44122109:-|nuORF	REV__ENST00000492321.5_1_7:44118242-44122109:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	306.693393	1222.74446	0.61991	0.00019012	4.4508	0.001365	5.0707	0.0015552	306.695108656962	33.53	0.18578	33.827	33.667	33.853	0.29701	0.0026329	0.0038171	NaN	0	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169360	+		1754	13438	834	841							0.14200232909979604
ARRRRQERKGL	11	Unmodified	_ARRRRQERKGL_					0	0	0			REV__ENST00000328668.7_1_5:149682172-149682211:-|nuORF	REV__ENST00000328668.7_1_5:149682172-149682211:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4371826052666	2	713.434724	1424.85489	1.6666	0.001189	3.2678	0.0023314	4.9344	0.0035204	713.4370726235239	52.513	0.9479	52.839	52.496	53.444	0.32553					100	31	5	0	0	0	0.88359	2	22045	22045;22154		10.8	3.2585	1	35978000	+		1755	12439	835	842	2288;2289	2288					0.15946169222593198
ARRVDRVAI	9	Unmodified	_ARRVDRVAI_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3286010622978	2	528.325257	1054.63596	1.9547	0.0010327	3.2757	0.0017306	5.2304	0.0027634	528.3273331662655	53.293	0.28178	53.616	53.475	53.756	0.32283					13	8	2	0	0	0	0.30098	1	22318	22318		25.399	0	1	1060300			1756	4569	836	843	2290	2290					0.11082764931234124
ARTVKIKKDK	10	Unmodified	_ARTVKIKKDK_					0	0	0			REV__tr|A0A7D6W298|A0A7D6W298_9CLOTTranscriptionalrepressorOS=ClostridiumintestinaleOX=36845GN=HZF06_05610PE=3SV=1	REV__tr|A0A7D6W298|A0A7D6W298_9CLOTTranscriptionalrepressorOS=ClostridiumintestinaleOX=36845GN=HZF06_05610PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2608215212822	3	396.25919	1185.75574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.925	1	93.093	92.593	93.593	0.16835								0	0	0	0.66254	1	38911	38911		0.15932	0	1		+		1757	15602	837	844	2291	2291					0.17029333485129428
ARVERRRHRRR	11	Unmodified	_ARVERRRHRRR_					0	0	0		ENST00000419807.5_3_2:44395715-44396385:+|nuORF	ENST00000419807.5_3_2:44395715-44396385:+|nuORF	ENST00000419807.5_3_2:44395715-44396385:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1285583376884	4	387.73862	1546.92537	0.71214	0.00027613	-2.9486	-0.0011433	-2.2365	-0.00086718	387.73699099357617	87.434	0.45203	87.434	87.278	87.73	0					24	15	2	0	0	0	0.14606	1	36632	36632		0.094841	0.094841	1	1067400			1758	6440	838	845	2292	2292					0.17378887330892212
ARVIQKRVPN	10	Unmodified	_ARVIQKRVPN_					0	0	0		ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	590.8674804568291	2	590.867289	1179.72002	2.4636	0.0014556	-1.4014	-0.00082805	1.0622	0.0006276	590.8663908332902	90.455	0.65047	90.455	90.193	90.843	0					74	20	5	0	0	0	0.89803	1	37734	37734		0.40072	0.40072	1	65063000			1759	3953	839	846	2293	2293					0.13735296028130506
ARVKALFR	8	Unmodified	_ARVKALFR_					0	0	0		tr|A0A7D6VSG3|A0A7D6VSG3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_16275PE=4SV=1	tr|A0A7D6VSG3|A0A7D6VSG3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_16275PE=4SV=1	tr|A0A7D6VSG3|A0A7D6VSG3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_16275PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.7001830935478	3	320.8749	959.602869	1.0651	0.00034176	1.945	0.00062411	3.0101	0.00096587	320.8760526641843	39.62	0.68841	40.93	40.489	41.177	1.3102					37	22	2	0	0	0	2.3239	1	16718	16718		0.40072	0.050084	1	1448900			1760	16868	840	847	2294	2294					0.12145182879180538
ARVLPLMQIPT	11	Unmodified	_ARVLPLMQIPT_					0	0	0		ENST00000311177.6_1_17:46699388-46699802:-|nuORF	ENST00000311177.6_1_17:46699388-46699802:-|nuORF	ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8701660037041	2	619.868108	1237.72166	1.4221	0.00088151	2.9559	0.0018323	4.378	0.0027138	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	0.85967	1	32611	32611		12.241	4.6317	1	7012900			1761	5806	841	848	2295	2295					0.11231169001871422
ARVLQRRK	8	Unmodified	_ARVLQRRK_					0	0	0		ENST00000519738.5_1_8:37411542-37411674:-|nuORF	ENST00000519738.5_1_8:37411542-37411674:-|nuORF	ENST00000519738.5_1_8:37411542-37411674:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	343.0903503298759	3	342.892953	1025.65703	-1.0852	-0.00037211	-1.2737	-0.00043673	-2.3589	-0.00080885	343.2259571549327	62.875	0.9379	62.875	62.522	63.46	0					33	29	2	0	0	0	2.3239	1	26083	26083		0.35063	0.043601	1	502760			1762	7075	842	849	2296	2296					0.14522775030741286
ARVQLPKKP	9	Unmodified	_ARVQLPKKP_					0	0	0		nc|ENSG00000161180|Q8IYX3-1|CCDC116;nc|ENSG00000161180|Q8IYX3-3|CCDC116;ENSG00000161180|ENST00000292779|CCDC116	nc|ENSG00000161180|Q8IYX3-1|CCDC116	nc|ENSG00000161180|Q8IYX3-1|CCDC116	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2253295779228	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.996	1	62.996	62.496	63.496	0								0	0	0	0.42693	1	26266	26266		0.96228	0.50394	1				1763	3589	843	850	2297	2297					0.13889721222130902
ARVRFRKK	8	Unmodified	_ARVRFRKK_					0	0	0		ENST00000552283.5_1_12:102505931-102512181:-|nuORF	ENST00000552283.5_1_12:102505931-102512181:-|nuORF	ENST00000552283.5_1_12:102505931-102512181:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0703002810478	3	354.233198	1059.67777	-1.0133	-0.00035895	-2.507	-0.00088808	-3.5204	-0.001247	354.56781031147864	65.256	0.15576	65.256	65.197	65.352	0					6	4	2	0	0	0	2.3239	1	27195	27195		0	0	1	176760			1764	7275	844	851	2298	2298					0.15031365410391118
ARVRFRKK	8	Unmodified	_ARVRFRKK_					0	0	0		ENST00000552283.5_1_12:102505931-102512181:-|nuORF	ENST00000552283.5_1_12:102505931-102512181:-|nuORF	ENST00000552283.5_1_12:102505931-102512181:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	354.233198	1059.67777	1.6186	0.00057335	-1.6205	-0.00057403	-0.0019151	-6.7841E-07	354.2324501499639	64.221	0.14973	65.629	65.56	65.71	1.4071	0.18653	0.00048175	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310180			1765	7275	844	851							0.15031365410391118
ASAFHLFLL	9	Unmodified	_ASAFHLFLL_					0	0	0		ENST00000503879.5_1_4:108969658-108999477:-|nuORF	ENST00000503879.5_1_4:108969658-108999477:-|nuORF	ENST00000503879.5_1_4:108969658-108999477:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7899352908134	2	509.789653	1017.56475	2.4808	0.0012647	0.24548	0.00012514	2.7262	0.0013898	509.7895926351298	43.965	0.31939	45.909	45.734	46.053	1.9438					21	9	3	0	0	0	0.34572	1	18405	18405		23.148	1.6114	1	1833000			1766	6991	845	852	2299	2299					0.056672521738505566
ASCACCCS	8	Unmodified	_ASCACCCS_					0	0	0			REV__ENST00000559668.5_1_15:84868328-84868472:-|nuORF	REV__ENST00000559668.5_1_15:84868328-84868472:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	374.0995971560478	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.455	1	13.455	12.955	13.955	0								0	0	0	1.0178	1	5575	5575		0.79363	0.79363	1		+		1767	13892	846	853	2300	2300					-0.19765837711679524
ASCKLRPLV	9	Unmodified	_ASCKLRPLV_					0	0	0			REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|15|3|anti-sense	REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|15|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	493.2288696169853	2	493.794412	985.574271	2.5072	0.001238	0.070578	3.4851E-05	2.5778	0.0012729	493.7945358291396	59.227	0.30405	60.646	60.527	60.831	1.4196					21	9	3	0	0	0	0.082477	1	24858	24858		32.305	9.1571	1	4719100	+		1768	8118	847	854	2301	2301					0.08090697187719798
ASELEEEHYYR	11	Unmodified	_ASELEEEHYYR_					0	0	0			REV__CPD-MYL4|1|fusion	REV__CPD-MYL4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.3181030154228	2	713.317688	1424.62082	1.6694	0.0011908	0.67109	0.0004787	2.3405	0.0016695	713.3182023195378	51.168	0.52963	51.496	51.323	51.853	0.32824					35	16	3	0	0	0	0.98765	1	21466	21466		4.5289	0.93237	1	2376300	+		1769	8405	848	855	2302	2302					-0.07450236237946228
ASFDSHVIV	9	Unmodified	_ASFDSHVIV_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7532226443291	2	487.750724	973.486896	2.7017	0.0013177	2.5674	0.0012523	5.2691	0.00257	487.7519949456702	78.388	0.43002	79.655	79.449	79.879	1.2668					34	13	3	0	0	0	0.10294	2	32921	32871;32921		48.346	8.3885	1	7186600	+		1770	9120	849	856	2303;2304	2304					-0.0009080548218207696
ASFDSHVIV	9	Unmodified	_ASFDSHVIV_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7533447146416	2	487.750724	973.486896	1.5982	0.00077953	2.8417	0.001386	4.4399	0.0021656	487.7520252104868	77.917	0.55125	79.668	79.32	79.871	1.7514					40	17	3	0	0	0	0.10294	2	32634	32634;32681		48.346	8.3885	1	7639100	+		1771	9120	849	856	2305;2306	2305					-0.0009080548218207696
ASFDSHVIV	9	Unmodified	_ASFDSHVIV_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	487.750724	973.486896	2.7017	0.0013177	2.5674	0.0012523	5.2691	0.00257	487.7519949456702	78.388	0.43002	79.655	79.449	79.879	1.2668	-0.0068846	-0.00013835	NaN	48.346	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7186600	+		1772	9120	849	856							-0.0009080548218207696
ASFDSHVIV	9	Unmodified	_ASFDSHVIV_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	487.750724	973.486896	1.5982	0.00077953	2.8417	0.001386	4.4399	0.0021656	487.7520252104868	77.917	0.55125	79.668	79.32	79.871	1.7514	0.0068846	0.00012916	NaN	48.346	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7639100	+		1773	9120	849	856							-0.0009080548218207696
ASFFFMVQF	9	Unmodified	_ASFFFMVQF_					0	0	0			REV__nc|ENSG00000164175|Q9UMX9-4|SLC45A2	REV__nc|ENSG00000164175|Q9UMX9-4|SLC45A2	MSMS	GG20161007_CRH_Patient100_W632_01	3	562.2690307497978	2	562.267696	1122.52084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.143	1	42.469	41.969	42.969	1.3254								0	0	0	0.32813	1	17253	17253		15.847	1.9411	1		+		1774	10721	850	857	2307	2307					-0.035521003147778174
ASFISMRKI	9	Unmodified	_ASFISMRKI_					0	0	0		nc|ENSG00000133059|Q6XUX3-4|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.5358459353447	3	351.535555	1051.58484	1.0622	0.0003734	-0.48825	-0.00017164	0.57394	0.00020176	351.53562856112313	39.347	0.48182	40.643	40.35	40.832	1.2961					43	15	4	0	0	0	0.11643	2	16474	16474;16526		33.445	1.4074	1	5941200			1775	7873	851	858	2308;2309	2308					0.06110679842140598
ASFISMRKI	9	Unmodified	_ASFISMRKI_					0	0	0		nc|ENSG00000133059|Q6XUX3-4|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.5355712771416	3	351.535555	1051.58484	0.80106	0.0002816	-0.19016	-6.6846E-05	0.61091	0.00021476	351.53548250122964	38.668	0.54433	40.504	40.304	40.848	1.8366					35	16	3	0	0	0	0.23535	1	16263	16263		21.59	1.0092	1	6113100			1776	7873	851	858	2310	2310					0.06110679842140598
ASFQPRVL	8	Unmodified	_ASFQPRVL_					0	0	0		ENST00000329082.11_1_15:93586813-93587449:-|nuORF	ENST00000329082.11_1_15:93586813-93587449:-|nuORF	ENST00000329082.11_1_15:93586813-93587449:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1731445193291	2	459.263802	916.513051	1.8546	0.00085173	-0.86049	-0.00039519	0.99407	0.00045654	459.2632594562408	42.867	0.47197	44.207	43.953	44.425	1.3399					24	14	2	0	0	0	2.3239	1	17971	17971		13.508	2.684	1	2832600			1777	5884	852	859	2311	2311					0.051455084799385986
ASFQPRVL	8	Unmodified	_ASFQPRVL_					0	0	0		ENST00000329082.11_1_15:93586813-93587449:-|nuORF	ENST00000329082.11_1_15:93586813-93587449:-|nuORF	ENST00000329082.11_1_15:93586813-93587449:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1721374392509	2	459.263802	916.513051	1.9397	0.00089082	-1.7412	-0.00079969	0.19843	9.113E-05	459.2625473591001	42.282	0.37218	44.203	43.98	44.353	1.9211					23	11	3	0	0	0	2.3239	1	17648	17648		14.582	7.2925	1	2899600			1778	5884	852	859	2312	2312					0.051455084799385986
ASFVGHPP	8	Unmodified	_ASFVGHPP_					0	0	0		nc|ENSG00000176994|Q8TEV9-2|SMCR8;ENSG00000176994|ENST00000406438|SMCR8	nc|ENSG00000176994|Q8TEV9-2|SMCR8	nc|ENSG00000176994|Q8TEV9-2|SMCR8	MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2092162966728	2	406.208495	810.402438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.5	1	90.904	90.404	91.404	1.4045								0	0	0	1.0178	1	37708	37708		0.79363	0	1				1779	4428	853	860	2313	2313					-0.010347115082936398
ASFWYTIV	8	Unmodified	_ASFWYTIV_					0	0	0		nc|ENSG00000171385|Q9UK17-2|KCND3;ENSG00000171385|ENST00000302127|KCND3	nc|ENSG00000171385|Q9UK17-2|KCND3	nc|ENSG00000171385|Q9UK17-2|KCND3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7514831423759	2	493.752736	985.490919	1.3174	0.00065047	-3.058	-0.0015099	-1.7406	-0.00085943	493.7510490426088	80.264	0.53552	81.981	81.726	82.261	1.7167					43	17	4	0	0	0	0.62161	1	33700	33700		38.151	0	1	12232000			1780	4186	854	861	2314	2314					-0.0024071598847967834
ASGVCKKEPWE	11	Unmodified	_ASGVCKKEPWE_					0	0	0		GARNL3|p.I473V|1|0.04|ENSG00000136895|chr9:127345463-127345463|A/G|missense_variant	GARNL3|p.I473V|1|0.04|ENSG00000136895|chr9:127345463-127345463|A/G|missense_variant	GARNL3|p.I473V|1|0.04|ENSG00000136895|chr9:127345463-127345463|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3009521365166	2	617.300255	1232.58596	-0.28546	-0.00017621	1.9927	0.0012301	1.7072	0.0010539	617.3016561895164	13.544	0.12364	14.271	14.194	14.317	0.72639					5	3	2	0	0	0	0.80586	1	5634	5634		15.248	0	1	519860			1781	7587	855	862	2315	2315					-0.021031505795917838
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.4955016970634	4	391.494153	1561.94751	0.11538	4.5172E-05	2.7312	0.0010693	2.8466	0.0011144	391.4956720521357	45.266	1.2964	45.266	44.964	46.261	0					187	40	7	0	0	0	1.0402	2	18967	18967;19006		0.08335	0.08335	1	203700000	+		1782	12554	856	863	2316;2317	2316					0.18901111799300452
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.4956237673759	4	391.494153	1561.94751	1.7891	0.00070042	1.2507	0.00048964	3.0398	0.0011901	391.4947586822703	44.141	1.7302	44.467	43.963	45.693	0.32664					236	57	5	0	0	0	1.0402	1	18608	18608		0.08335	0.08335	1	141910000	+		1783	12554	856	863	2318	2318					0.18901111799300452
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.6581909060478	3	521.656445	1561.94751	1.9416	0.0010128	1.3389	0.00069845	3.2805	0.0017113	521.6566613987391	44.174	1.018	44.5	44.027	45.045	0.32674					90	33	3	0	0	0	1.0402	1	18636	18636		0.08335	0.08335	1	5238100	+		1784	12554	856	863	2319	2319					0.18901111799300452
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	391.4951049685478	4	391.494153	1561.94751	1.0974	0.00042962	1.5821	0.00061937	2.6794	0.001049	391.4949225338448	42.908	2.0131	44.248	43.667	45.68	1.3399					250	64	5	0	0	0	1.039	3	18130	17973;18012;18130		0.45452	0.35968	1	133070000	+		1785	12554	856	863	2320;2321;2322	2322					0.18901111799300452
ASHRRRRRRRR	11	Unmodified	_ASHRRRRRRRR_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.4947997927666	4	391.494153	1561.94751	1.5226	0.00059611	0.63264	0.00024767	2.1553	0.00084378	391.49452146757574	42.232	1.7709	44.153	43.633	45.404	1.9211					232	57	5	0	0	0	1.0402	3	17685	17685;17802;17880		0.08335	0.08335	1	154800000	+		1786	12554	856	863	2323;2324;2325	2323					0.18901111799300452
ASIMIVRHL	9	Unmodified	_ASIMIVRHL_					0	0	0		ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5466186404228	3	347.20755	1038.60082	1.0734	0.0003727	3.3083	0.0011487	4.3818	0.0015214	347.2065278909204	40.964	0.7537	42.289	41.929	42.683	1.3254					55	23	3	0	0	0	0.62937	1	17125	17125		10.151	3.0488	1	6380700			1787	5855	857	864	2326	2326					0.08306386079061667
ASIRRRQILY	10	Unmodified	_ASIRRRQILY_					0	0	0			REV__ENST00000493306.1_1_9:110251313-110251631:-|nuORF	REV__ENST00000493306.1_1_9:110251313-110251631:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	638.3848754763603	2	638.385845	1274.75714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.4	1	102.4	101.9	102.9	0								0	0	0	0.66052	1	42906	42906		3.5965	1.098	1		+		1788	13444	858	865	2327	2327					0.1307496757390254
ASKIKGTYRRG	11	Unmodified	_ASKIKGTYRRG_					0	0	0			REV__PALB2|p.R516I|1|0.19|ENSG00000083093|chr16:23634999-23634999|C/A|missense_variant	REV__PALB2|p.R516I|1|0.19|ENSG00000083093|chr16:23634999-23634999|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.9118835330009	3	412.910561	1235.70985	2.9387	0.0012134	-0.84202	-0.00034768	2.0967	0.00086575	412.91047799730853	81.176	0.70981	82.409	82.133	82.842	1.2332					44	22	3	0	0	0	1.0365	1	34121	34121		1.2148	0	1	898350	+		1789	14592	859	866	2328	2328					0.10142688302858005
ASLSALRVL	9	Unmodified	_ASLSALRVL_					0	0	0		ENSG00000204779|ENST00000377420|FOXD4L5;ENSG00000184659|ENST00000377413|FOXD4L4;ENSG00000273514|ENST00000622588|FOXD4L6;ENSG00000187559|ENST00000342833|FOXD4L3	ENSG00000204779|ENST00000377420|FOXD4L5	ENSG00000204779|ENST00000377420|FOXD4L5	MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2930786013603	2	465.292559	928.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.931	1	47.306	46.806	47.806	1.3751								0	0	0	0.35665	1	19240	19240		13.042	2.9685	1				1790	4701	860	867	2329	2329					0.10342350685516521
ASLTLPKSL	9	Unmodified	_ASLTLPKSL_					0	0	0			REV__TMPRSS13|p.P514Afs*5|1|0.16|ENSG00000137747|chr11:117903792-117903793|-/C|frameshift_variant	REV__TMPRSS13|p.P514Afs*5|1|0.16|ENSG00000137747|chr11:117903792-117903793|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2867614626884	2	465.286943	928.559333	2.1427	0.00099697	3.0043	0.0013979	5.147	0.0023948	465.2876640144889	45.672	0.43713	47.047	46.897	47.334	1.3751					21	13	2	0	0	0	0.46566	1	19190	19190		17.113	0.1706	1	1272100	+		1791	10028	861	868	2330	2330					0.09219528591370363
ASMPRKPA	8	Unmodified	_ASMPRKPA_					0	0	0			REV__ENST00000293880.9_1_11:57094898-57095944:-|nuORF	REV__ENST00000293880.9_1_11:57094898-57095944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2369567751884	2	429.23673	856.458907	1.2181	0.00052284	-0.51056	-0.00021915	0.7075	0.00030368	429.236401501721	54.159	0.85167	54.159	53.712	54.563	0					70	27	3	0	0	0	0.88587	1	22619	22619		5.2307	0	1	11857000	+		1792	10359	862	869	2331	2331					0.02493593056726695
ASMPRKPA	8	Unmodified	_ASMPRKPA_					0	0	0			REV__ENST00000293880.9_1_11:57094898-57095944:-|nuORF	REV__ENST00000293880.9_1_11:57094898-57095944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.2358276247978	2	429.23673	856.458907	0.39655	0.00017021	-1.9433	-0.00083415	-1.5468	-0.00066393	429.2355718647136	51.404	0.51956	53.38	53.191	53.711	1.9753					44	18	3	0	0	0	0.88587	1	21584	21584		5.2307	0	1	16956000	+		1793	10359	862	869	2332	2332					0.02493593056726695
ASNLLRLRVL	10	Unmodified	_ASNLLRLRVL_					0	0	0		ENST00000523340.1_1_8:42389945-42390071:-|nuORF	ENST00000523340.1_1_8:42389945-42390071:-|nuORF	ENST00000523340.1_1_8:42389945-42390071:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1540710330009	3	385.583785	1153.72953	1.7024	0.00065643	-1.745	-0.00067285	-0.04259	-1.6422E-05	385.5832690228744	48.095	0.59451	48.425	48.103	48.698	0.33034					22	19	2	0	0	0	0.12559	1	20205	20205		0.77653	0.078866	1	443490			1794	7098	863	870	2333	2333					0.1588106431365759
ASPGKSKK	8	Unmodified	_ASPGKSKK_					0	0	0			REV__ENSG00000111142|ENST00000323666|METAP2	REV__ENSG00000111142|ENST00000323666|METAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1808959841728	2	401.742702	801.470852	3.7245	0.0014963	0.35825	0.00014392	4.0827	0.0016402	401.74228122104813	91.323	0.44234	92.305	92.006	92.448	0.98157					20	13	2	0	0	0	2.3239	1	38465	38465		0.69038	0.088878	1	756700	+		1795	9316	864	871	2334	2334					0.062175330715604105
ASQDCCCCCYS	11	Unmodified	_ASQDCCCCCYS_					0	0	0		ENST00000373053.7_2_10:74647032-74647206:+|nuORF	ENST00000373053.7_2_10:74647032-74647206:+|nuORF	ENST00000373053.7_2_10:74647032-74647206:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1589233279228	2	593.16053	1184.30651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.602	1	46.932	46.432	47.432	0.33034								0	0	0	0.63775	1	19553	19553		0.26902	0.26902	1				1796	6152	865	872	2335	2335					-0.2782742285119184
ASQDCCCCCYS	11	Unmodified	_ASQDCCCCCYS_					0	0	0		ENST00000373053.7_2_10:74647032-74647206:+|nuORF	ENST00000373053.7_2_10:74647032-74647206:+|nuORF	ENST00000373053.7_2_10:74647032-74647206:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1591674685478	2	593.16053	1184.30651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.99	1	12.777	12.277	13.277	0.78751								0	0	0	0.63775	1	4978	4978		0.30703	0.30703	1				1797	6152	865	872	2336	2336					-0.2782742285119184
ASRELLQRR	9	Unmodified	_ASRELLQRR_					0	0	0		tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8317748904228	2	564.833446	1127.65234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.64	1	99.866	99.366	100.37	0.22545								0	0	0	0.11571	1	41913	41913		32.305	0	1				1798	17182	866	873	2337	2337					0.09361846097340276
ASRHGRFL	8	Unmodified	_ASRHGRFL_					0	0	0			REV__ENST00000495191.5_1_6:32116492-32118763:-|nuORF	REV__ENST00000495191.5_1_6:32116492-32118763:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1790038943291	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.973	1	81.973	81.473	82.473	0								0	0	0	1.0178	1	34147	34147		1.4819	0	1		+		1799	12060	867	874	2338	2338					0.04122562288569043
ASRHGRFL	8	Unmodified	_ASRHGRFL_					0	0	0			REV__ENST00000495191.5_1_6:32116492-32118763:-|nuORF	REV__ENST00000495191.5_1_6:32116492-32118763:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1789733767509	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.194	1	82.194	81.694	82.694	0								0	0	0	1.0178	1	34240	34240		1.4819	0	1		+		1800	12060	867	874	2339	2339					0.04122562288569043
ASRTSRQWKR	10	Unmodified	_ASRTSRQWKR_					0	0	0			REV__chr10:86962675-86963052|123|62.59|0.72|6.44|+|1|SNCG,None|1	REV__chr10:86962675-86963052|123|62.59|0.72|6.44|+|1|SNCG,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.9069091677666	3	425.90581	1274.6956	0.41135	0.0001752	2.5979	0.0011065	3.0093	0.0012817	425.9068368242489	19.419	0.30526	20.942	20.832	21.137	1.5237					18	9	3	0	0	0	0.8872	1	8070	8070		2.8433	0.21205	1	822600	+		1801	8234	868	875	2340	2340					0.06924035874590118
ASRVMLRTR	9	Unmodified	_ASRVMLRTR_					0	0	0			REV__ENSG00000221916|ENST00000408991|C19orf73	REV__ENSG00000221916|ENST00000408991|C19orf73	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3181030154228	2	545.319117	1088.62368	2.3261	0.0012685	-2.8885	-0.0015751	-0.5624	-0.00030669	545.3173703630918	87.567	0.3809	87.567	87.378	87.759	0					31	12	3	0	0	0	0.8432	1	36556	36556		1.4819	0.68827	1	7208500	+		1802	11881	869	876	2341	2341					0.08291405196519008
ASSKSMVKTI	10	Unmodified	_ASSKSMVKTI_					0	0	0			REV__ENST00000521983.1_1_8:26484742-26500445:+|nuORF	REV__ENST00000521983.1_1_8:26484742-26500445:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2929565310478	2	526.294442	1050.57433	1.826	0.00096102	-3.4252	-0.0018026	-1.5992	-0.00084163	526.2918965573716	65.845	0.3345	67.753	67.586	67.921	1.9085					22	10	3	0	0	0	0.77604	1	27614	27614		14.838	0	1	2132200	+		1803	8919	870	877	2342	2342					0.051066523970803246
ASTRLLHTK	9	Unmodified	_ASTRLLHTK_					0	0	0			REV__ENSG00000134070|ENST00000256458|IRAK2	REV__ENSG00000134070|ENST00000256458|IRAK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8746215701103	3	342.873336	1025.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.207	1	35.031	34.531	35.531	1.8246								0	0	0	0.42693	1	13921	13921		3.5871	1.5011	1		+		1804	9891	871	878	2343	2343					0.08640253945759468
ASTSLIMQL	9	Unmodified	_ASTSLIMQL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2618286013603	2	482.26261	962.510668	2.2737	0.0010965	-2.9563	-0.0014257	-0.68262	-0.0003292	482.26093524024077	66.004	0.48281	67.403	67.034	67.517	1.3989					28	15	2	0	0	0	0.09539	1	27699	27699		50.855	12.704	1	1308300			1805	463	872	879	2344	2344					0.027912919599771158
ASTSLIMQL	9	Unmodified	_ASTSLIMQL_					0	0	0		nc|ENSG00000003137|Q9NR63-2|CYP26B1;nc|ENSG00000003137|Q9NR63-3|CYP26B1;ENSG00000003137|ENST00000001146|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	nc|ENSG00000003137|Q9NR63-2|CYP26B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	482.26261	962.510668	1.6198	0.00078115	-1.4232	-0.00068638	0.19652	9.4773E-05	482.2619434244017	65.544	0.43317	67.452	67.126	67.559	1.9085	0.024449	0.00068828	NaN	50.855	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1787100			1806	463	872	879							0.027912919599771158
ASURUKNQAK	10	Unmodified	_ASURUKNQAK_					0	0	0		ENSG00000250722|ENST00000514985|SELENOP	ENSG00000250722|ENST00000514985|SELENOP	ENSG00000250722|ENST00000514985|SELENOP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	602.7158080935478	2	602.715593	1203.41663	1.7222	0.001038	-2.4764	-0.0014925	-0.75415	-0.00045454	602.7142224169465	32.528	1.0853	32.528	31.886	32.971	0					79	34	3	0	0	0	0.88022	1	13713	13713		0	0	0	1226500			1807	5382	873	880	2345	2345					-0.17693778207990363
ASVALLEASL	10	Unmodified	_ASVALLEASL_					0	0	0		nc|ENSG00000101445|Q96T49-2|PPP1R16B;ENSG00000101445|ENST00000299824|PPP1R16B	nc|ENSG00000101445|Q96T49-2|PPP1R16B	nc|ENSG00000101445|Q96T49-2|PPP1R16B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2803527712822	2	487.281857	972.549162	1.7374	0.00084659	-2.3722	-0.0011559	-0.63483	-0.00030934	487.2800975756417	42.846	0.40942	44.186	43.953	44.362	1.3399					16	12	2	0	0	0	0.19223	1	17930	17930		49.933	7.9774	1	1320900			1808	1351	874	881	2346	2346					0.061789208661252815
ASVDKVLEL	9	Unmodified	_ASVDKVLEL_					0	0	0		nc|ENSG00000152795|O14979-3|HNRNPDL;HNRNPDL|p.K289Nfs*3|1|0.69|ENSG00000152795|chr4:82427472-82427472|T/-|frameshift_variant;nc|ENSG00000152795|O14979-2|HNRNPDL;ENSG00000152795|ENST00000295470|HNRNPDL	nc|ENSG00000152795|O14979-3|HNRNPDL	nc|ENSG00000152795|O14979-3|HNRNPDL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2807494997978	2	487.281857	972.549162	1.6726	0.00081503	-3.4073	-0.0016603	-1.7347	-0.00084526	487.27947804493016	42.197	0.34158	44.118	44.011	44.353	1.9211					14	10	2	0	0	0	0.11077	1	17692	17692		45.74	5.7902	1	1369800			1809	3339	875	882	2347	2347					0.061789208661252815
ASVLLFPIPV	10	Unmodified	_ASVLLFPIPV_					0	0	0			REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3298217654228	2	528.328611	1054.64267	1.7112	0.00090407	-0.2522	-0.00013324	1.459	0.00077082	528.328420597037	68.75	0.93454	68.75	68.485	69.42	0					85	29	4	0	0	0	0.11481	1	28659	28659		61.357	1.2836	1	9252500	+		1810	15175	876	883	2348	2348					0.11753265039214966
ASVLLFPIPV	10	Unmodified	_ASVLLFPIPV_					0	0	0			REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3300659060478	2	528.328611	1054.64267	1.8099	0.00095623	-0.1521	-8.0356E-05	1.6578	0.00087588	528.3284725725738	67.057	1.4125	68.446	68.121	69.534	1.3887					141	45	5	0	0	0	0.11481	3	28133	28133;28187;28240		61.357	1.2836	1	52826000	+		1811	15175	876	883	2349;2350;2351	2349					0.11753265039214966
ASVLLFPIPV	10	Unmodified	_ASVLLFPIPV_					0	0	0			REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	REV__tr|A0A553SRU8|A0A553SRU8_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_01875PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3294555544853	2	528.328611	1054.64267	1.6413	0.00086715	-0.51372	-0.00027142	1.1276	0.00059573	528.3282862703935	66.622	1.4169	68.511	68.182	69.599	1.8889					114	45	4	0	0	0	0.068389	1	28069	28069		71.134	8.5609	1	60728000	+		1812	15175	876	883	2352	2352					0.11753265039214966
ASVTLLARYF	10	Unmodified	_ASVTLLARYF_					0	0	0			REV__ENST00000405876.8_1_12:110354461-110354608:+|nuORF	REV__ENST00000405876.8_1_12:110354461-110354608:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.8867065310478	3	380.885241	1139.63389	1.6291	0.00062049	2.0513	0.00078129	3.6803	0.0014018	380.88601018686467	52.064	0.94672	52.389	52.006	52.953	0.32554					99	30	4	0	0	0	0.87762	1	21905	21905		3.8763	0.28927	1	14753000	+		1813	12897	877	884	2353	2353					0.06966291402750358
ASYPIPIIL	9	Unmodified	_ASYPIPIIL_					0	0	0		nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;ENSG00000114650|ENST00000265565|SCAP;ENST00000420588.5_1_3:47476443-47484489:-|nuORF;SCAP-SMARCC1|1|fusion	nc|ENSG00000114650|Q12770-3|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.5832397341728	1	986.592096	985.584819	5.0302	0.0049627	-3.6449	-0.0035961	1.3852	0.0013667	986.5874163802454	87.192	0.46294	88.687	88.456	88.919	1.4953					30	14	3	0	0	0	0.09539	1	36837	36837		50.855	6.448	1	7587600			1814	1875	878	885	2354	2354					0.09145003113803796
ASYSGLMRI	9	Unmodified	_ASYSGLMRI_					0	0	0		ENSG00000169727|ENST00000578552|GPS1;nc|ENSG00000169727|Q13098|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;ENST00000392357.1_1_17:80010993-80011926:+|nuORF	ENSG00000169727|ENST00000578552|GPS1	ENSG00000169727|ENST00000578552|GPS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	498.8154785037041	2	499.260402	996.506251	2.0692	0.0010331	0.33561	0.00016756	2.4048	0.0012006	499.2605140445021	41.825	0.36845	43.15	42.908	43.276	1.3254					17	11	2	0	0	0	0.11216	1	17564	17564		16.149	3.6176	1	872800			1815	4108	879	886	2355	2355					0.00785827537060868
ATAPCWFR	8	Unmodified	_ATAPCWFR_					0	0	0		nc|ENSG00000205176|Q8IX06|REXO1L1P	nc|ENSG00000205176|Q8IX06|REXO1L1P	nc|ENSG00000205176|Q8IX06|REXO1L1P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1977722048759	2	476.228905	950.443257	0.31422	0.00014964	0.45791	0.00021807	0.77213	0.00036771	476.22900117533266	14.374	0.097806	15.271	15.232	15.329	0.89664					7	4	2	0	0	0	2.3239	1	5958	5958		4.756	3.4265	1	597980			1816	7982	880	887	2356	2356					-0.033946934603250156
ATAVIPQWQK	10	Unmodified	_ATAVIPQWQK_					0	0	0		ENST00000569825.1_1_16:70287541-70292096:-|nuORF;ENSG00000090861|ENST00000261772|AARS1;nc|ENSG00000090861|P49588-2|AARS1	ENST00000569825.1_1_16:70287541-70292096:-|nuORF	ENST00000569825.1_1_16:70287541-70292096:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	571.8331176638603	2	571.321848	1140.62914	2.8927	0.0016527	-0.016353	-9.343E-06	2.8763	0.0016433	571.3214962147222	61.972	0.27937	63.929	63.689	63.968	1.9571					11	8	2	0	0	0	0.12461	1	25936	25936		14.838	0.93222	1	1722700			1817	1143	881	888	2357	2357					0.0644540725998013
ATAVMPDGQFK	11	Unmodified	_ATAVMPDGQFK_					0	0	0		ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7905151247978	2	582.789524	1163.56449	1.2384	0.00072174	-1.4046	-0.0008186	-0.1662	-9.6862E-05	582.7886504559667	25.522	0.36936	26.782	26.617	26.987	1.2594					9	6	2	0	0	0	0.89436	1	10698	10698		10.151	1.4052	1	317230			1818	2010	882	889	2358	2358					-0.010745356083134538
ATAVMPDGQFK	11	Unmodified	_ATAVMPDGQFK_					0	0	0		ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	582.789524	1163.56449	0.55295	0.00032225	0.042235	2.4614E-05	0.59518	0.00034687	582.7899931191611	25.145	0.23917	26.862	26.727	26.966	1.7167	0.040094	0.0012726	NaN	10.151	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	356180			1819	2010	882	889							-0.010745356083134538
ATCEAWPSS	9	Unmodified	_ATCEAWPSS_					0	0	0			REV__ENST00000377459.2_1_6:27114971-27115085:+|nuORF	REV__ENST00000377459.2_1_6:27114971-27115085:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1992370486259	2	476.197467	950.380382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.22	1	13.22	12.72	13.72	0								0	0	0	0.42693	1	5476	5476		4.3292	0.73274	1		+		1820	12729	883	890	2359	2359					-0.09679304039025283
ATEKEKVWYH	10	Unmodified	_ATEKEKVWYH_					0	0	0		ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-3|DDX1;nc|ENSG00000079785|Q92499-2|DDX1	ENSG00000079785|ENST00000233084|DDX1	ENSG00000079785|ENST00000233084|DDX1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.034	1	13.862	13.362	14.362	0.82789								0	0	0	0.66222	1	5404	5404		0.69767	0.19171	1				1821	995	884	891	2360	2360					0.007201845634881465
ATEPRLFIESK	11	Unmodified	_ATEPRLFIESK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.8560668826103	2	645.856252	1289.69795	1.0938	0.00070644	1.1317	0.00073094	2.2255	0.0014374	645.856329854803	48.923	0.27859	50.311	50.14	50.418	1.388					14	8	2	0	0	0	0.87205	1	20465	20465		11.495	0.67078	1	2003200	+		1822	15572	885	892	2361	2361					0.06469026769036645
ATEPRLFIESK	11	Unmodified	_ATEPRLFIESK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.8573486208916	2	645.856252	1289.69795	2.0438	0.00132	-0.98819	-0.00063823	1.0556	0.00068176	645.8552318493774	48.366	0.24722	50.343	50.175	50.422	1.9772					12	7	2	0	0	0	0.93654	2	20230	20230;20280		7.609	4.0125	1	1382900	+		1823	15572	885	892	2362;2363	2362					0.06469026769036645
ATEPRLFIESK	11	Unmodified	_ATEPRLFIESK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	645.856252	1289.69795	1.0938	0.00070644	1.1317	0.00073094	2.2255	0.0014374	645.856329854803	48.923	0.27859	50.311	50.14	50.418	1.388	-0.01622	0.0016195	NaN	11.495	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2003200	+		1824	15572	885	892							0.06469026769036645
ATEPRLFIESK	11	Unmodified	_ATEPRLFIESK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	645.856252	1289.69795	2.0438	0.00132	-0.98819	-0.00063823	1.0556	0.00068176	645.8552318493774	48.366	0.24722	50.343	50.175	50.422	1.9772	0.01622	-0.0011188	NaN	11.495	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1382900	+		1825	15572	885	892							0.06469026769036645
ATFLFCRC	8	Unmodified	_ATFLFCRC_					0	0	0			REV__ENST00000595081.5_1_19:50364507-50365005:-|nuORF	REV__ENST00000595081.5_1_19:50364507-50365005:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	480.6094543337822	2	480.725141	959.435729	0.75024	0.00036066	-0.79646	-0.00038288	-0.04622	-2.2219E-05	480.72455073793117	32.04	0.36314	33.864	33.669	34.033	1.8246					23	12	2	0	0	0	2.3239	1	13498	13498		8.5933	0	1	2840400	+		1826	8595	886	893	2364	2364					-0.045611690522605386
ATGFCCHC	8	Unmodified	_ATGFCCHC_					0	0	0		ENSG00000087303|ENST00000216286|NID2;nc|ENSG00000087303|Q14112-2|NID2	ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	841.1335937380791	1	841.278976	840.2717	2.4623	0.0020715	-4.1203	-0.0034663	-1.658	-0.0013948	841.2784799195607	82.734	0.27409	84.404	84.236	84.51	1.67					13	8	2	0	0	0	2.3239	1	34687	34687		0	0	1	615780			1827	1089	887	894	2365	2365					-0.1548250981466026
ATGGDAYD	8	Unmodified	_ATGGDAYD_					0	0	0		tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1545593142509	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.1	1	97.384	96.884	97.884	0.28442								0	0	0	1.0178	1	40855	40855		0.69038	0	1				1828	16755	888	895	2366	2366					-0.10080181638147678
ATGGDAYD	8	Unmodified	_ATGGDAYD_					0	0	0		tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1533080935478	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.244	1	64.201	63.701	64.701	1.9571								0	0	0	1.0178	1	26118	26118		0.69038	0	1				1829	16755	888	895	2367	2367					-0.10080181638147678
ATGGDAYD	8	Unmodified	_ATGGDAYD_					0	0	0		tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	tr|A0A7D6VP54|A0A7D6VP54_9CLOT5'-nucleotidaseC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1541015505791	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.362	1	64.319	63.819	64.819	1.9571								0	0	0	1.0178	1	26169	26169		0.69038	0	1				1830	16755	888	895	2368	2368					-0.10080181638147678
ATGKGLERFLN	11	Unmodified	_ATGKGLERFLN_					0	0	0		tr|A0A553SKP6|A0A553SKP6_NIACISporulationproteinYqfDOS=NialliacirculansOX=1397GN=yqfDPE=4SV=1	tr|A0A553SKP6|A0A553SKP6_NIACISporulationproteinYqfDOS=NialliacirculansOX=1397GN=yqfDPE=4SV=1	tr|A0A553SKP6|A0A553SKP6_NIACISporulationproteinYqfDOS=NialliacirculansOX=1397GN=yqfDPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.3377563357353	2	603.335487	1204.65642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.44	1	104.6	104.1	105.1	0.16055								0	0	0	0.63775	1	44243	44243		4.897	0	1				1831	16301	889	896	2369	2369					0.06227890800369096
ATIKQKSRLVA	11	Unmodified	_ATIKQKSRLVA_					0	0	0			REV__HIVEP2|p.L1693V|1|0.33|ENSG00000010818|chr6:142769662-142769662|G/C|missense_variant	REV__HIVEP2|p.L1693V|1|0.33|ENSG00000010818|chr6:142769662-142769662|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8854858279228	2	607.882604	1213.75066	3.2359	0.001967	-0.767	-0.00046624	2.4689	0.0015008	607.8837475820977	105.94	0.12238	106.1	106.03	106.15	0.16679					14	5	3	0	0	0	1.0214	1	45177	45177		2.4985	0.65425	1	47678000	+		1832	14222	890	897	2370	2370					0.15233029622504546
ATLNIIHSV	9	Unmodified	_ATLNIIHSV_					0	0	0		nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;ENSG00000143952|ENST00000272322|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2845947146416	2	484.282192	966.549831	2.4118	0.001168	0.60487	0.00029293	3.0167	0.0014609	484.2820297409119	40.324	0.24166	41.634	41.514	41.756	1.3102					10	7	2	0	0	0	0.073578	1	16916	16916		58.679	38.225	1	883240			1833	3059	891	898	2371	2371					0.06521760305849966
ATLNIIHSV	9	Unmodified	_ATLNIIHSV_					0	0	0		nc|ENSG00000143952|Q9P1Q0-3|VPS54;nc|ENSG00000143952|Q9P1Q0-4|VPS54;nc|ENSG00000143952|Q9P1Q0-2|VPS54;ENSG00000143952|ENST00000272322|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	nc|ENSG00000143952|Q9P1Q0-3|VPS54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2818481326103	2	484.282192	966.549831	1.7365	0.00084097	0.095079	4.6045E-05	1.8316	0.00088701	484.2819820448455	39.878	0.24751	41.74	41.615	41.862	1.8624					12	7	2	0	0	0	0.1109	1	16722	16722		45.7	26.261	1	672930			1834	3059	891	898	2372	2372					0.06521760305849966
ATLPGDQLLE	10	Unmodified	_ATLPGDQLLE_					0	0	0			REV__ENST00000568760.5_1_16:90023820-90023979:+|nuORF	REV__ENST00000568760.5_1_16:90023820-90023979:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1056.557788074017	1	1056.55717	1055.54989	3.7895	0.0040038	-1.5786	-0.0016679	2.2108	0.0023359	1056.556224257195	86.423	0.44836	87.55	87.299	87.747	1.1265					25	17	2	0	0	0	0.60583	1	36339	36339		22.736	3.2973	1	8854800	+		1835	13951	892	899	2373	2373					0.02433715515167023
ATLSWSLGFPA	11	Unmodified	_ATLSWSLGFPA_					0	0	0		ENST00000369037.8_1_6:107655524-107780637:-|nuORF	ENST00000369037.8_1_6:107655524-107780637:-|nuORF	ENST00000369037.8_1_6:107655524-107780637:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2982665896416	2	575.300581	1148.58661	1.2421	0.00071457	-4.4523	-0.0025614	-3.2102	-0.0018468	575.2975443067584	25.574	0.24601	26.834	26.649	26.895	1.2594					20	7	3	0	0	0	0.95983	1	10685	10685		6.2058	1.4498	1	948890			1836	6093	893	900	2374	2374					0.01826012131778043
ATLWGVSG	8	Unmodified	_ATLWGVSG_					0	0	0		tr|A0A7D6VSM1|A0A7D6VSM1_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11225PE=3SV=1	tr|A0A7D6VSM1|A0A7D6VSM1_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11225PE=3SV=1	tr|A0A7D6VSM1|A0A7D6VSM1_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11225PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	395.7097045779228	2	395.708328	789.402104	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.487	1	22.664	22.164	23.164	1.177								0	0	0	1.0178	1	8972	8972		13.508	0	1				1837	16874	894	901	2375	2375					-0.0010213122814093367
ATPALYMLSPF	11	Unmodified	_ATPALYMLSPF_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	605.8578979372978	2	605.812467	1209.61038	2.1937	0.001329	-2.6833	-0.0016256	-0.48962	-0.00029662	605.8108280358986	68.323	0.18445	69.701	69.553	69.737	1.3778					6	5	2	0	0	0	0.14606	1	28680	28680		13.042	4.8869	1	252870			1838	4091	895	902	2376	2376					0.01396109573920512
ATPAPPRNLI	10	Unmodified	_ATPAPPRNLI_					0	0	0			REV__ENST00000582705.1_1_17:30689933-30692512:+|nuORF	REV__ENST00000582705.1_1_17:30689933-30692512:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3074218630791	2	525.308741	1048.60293	1.8567	0.00097533	-3.0326	-0.0015931	-1.1759	-0.00061773	525.3062805354257	83.563	0.43965	84.751	84.483	84.923	1.1879					24	13	3	0	0	0	0.86043	1	35098	35098		5.7319	0.97584	1	5524200	+		1839	8528	896	903	2377	2377					0.08057138088520333
ATPYLPLPG	9	Unmodified	_ATPYLPLPG_					0	0	0		ENST00000393409.2_1_3:126755324-126755609:+|nuORF	ENST00000393409.2_1_3:126755324-126755609:+|nuORF	ENST00000393409.2_1_3:126755324-126755609:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	928.5217773318291	1	928.513845	927.506569	1.7207	0.0015977	0.46593	0.00043263	2.1867	0.0020303	928.5152339721012	77.32	0.28149	77.32	77.189	77.47	0					11	8	2	0	0	0	0.46905	1	32200	32200		16.942	4.4107	1	413690			1840	6269	897	904	2378	2378					0.039915705285807235
ATQLERTF	8	Unmodified	_ATQLERTF_					0	0	0		tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2567321658134	2	483.256174	964.497795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.963	1	33.787	33.287	34.287	1.8246								0	0	0	1.0178	1	13399	13399		2.5775	0	1				1841	16070	898	905	2379	2379					0.014125968921121057
ATRKQRIT	8	Unmodified	_ATRKQRIT_					0	0	0		ENST00000588439.1_1_19:36395473-36398510:-|nuORF;nc|ENSG00000011600|O43914-3|TYROBP;nc|ENSG00000011600|O43914-2|TYROBP;ENSG00000011600|ENST00000262629|TYROBP;SPINT2-TYROBP|2|fusion;SPINT2-TYROBP|1|fusion	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	ENST00000588439.1_1_19:36395473-36398510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2998229861259	2	487.298707	972.582862	1.8173	0.00088555	-0.55005	-0.00026804	1.2672	0.00061751	487.2983357474816	74.98	0.40849	74.98	74.745	75.154	0					29	12	3	0	0	0	0.89156	1	31171	31171		0.6015	0.6015	1	5555700			1842	575	899	906	2380	2380					0.09547387148563757
ATRQLILL	8	Unmodified	_ATRQLILL_					0	0	0		ENSG00000197601|ENST00000354817|FAR1;ENST00000524933.1_1_11:13716477-13732426:+|nuORF;FAR1|p.G252Vfs*27|1|0.15|ENSG00000197601|chr11:13711794-13711794|G/-|frameshift_variant	ENSG00000197601|ENST00000354817|FAR1	ENSG00000197601|ENST00000354817|FAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.3039733767509	2	464.302927	926.591301	1.8052	0.00083814	0.81725	0.00037945	2.6224	0.0012176	464.3034370859166	43.015	0.37517	44.355	44.17	44.546	1.3399					22	11	3	0	0	0	0.82246	1	18068	18068		19.257	0	1	2914000			1843	5016	900	907	2381	2381					0.12506941065203137
ATVVAPLKL	9	Unmodified	_ATVVAPLKL_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3004943728447	2	456.299853	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.16	1	106.32	105.82	106.82	0.16174								0	0	0	0.42693	1	45341	45341		1.8442	1.0506	1		+		1844	9170	901	908	2382	2382					0.1262842283365444
ATWKQKQHT	9	Unmodified	_ATWKQKQHT_					0	0	0			REV__SH3KBP1|p.P255Qfs*20|1|0.01|ENSG00000147010|chrX:19645438-19645438|G/-|frameshift_variant	REV__SH3KBP1|p.P255Qfs*20|1|0.01|ENSG00000147010|chrX:19645438-19645438|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3026000857353	2	564.301447	1126.58834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.04	1	103.1	102.6	103.6	0.062805								0	0	0	0.42693	1	43180	43180		2.0598	0	1		+		1845	14618	902	909	2383	2383					0.030110659403590034
ATWLRRRG	8	Unmodified	_ATWLRRRG_					0	0	0		nc|ENSG00000176720|Q9UMX3-2|BOK;ENSG00000176720|ENST00000318407|BOK	nc|ENSG00000176720|Q9UMX3-2|BOK	nc|ENSG00000176720|Q9UMX3-2|BOK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2993652224541	2	508.299042	1014.58353	2.3142	0.0011763	-0.89833	-0.00045662	1.4159	0.0007197	508.2984084120411	91.962	0.40897	91.962	91.725	92.134	0					28	12	3	0	0	0	0.89008	2	38432	38432;38475		2.5775	0.27475	1	1930600			1846	4417	903	910	2384;2385	2384					0.07682226588269714
ATWLRRRG	8	Unmodified	_ATWLRRRG_					0	0	0		nc|ENSG00000176720|Q9UMX3-2|BOK;ENSG00000176720|ENST00000318407|BOK	nc|ENSG00000176720|Q9UMX3-2|BOK	nc|ENSG00000176720|Q9UMX3-2|BOK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2997009158134	2	508.299042	1014.58353	2.8984	0.0014732	-1.2764	-0.0006488	1.6219	0.00082443	508.2985953315578	91.711	0.42077	91.901	91.723	92.144	0.19042					26	12	3	0	0	0	0.89008	2	38413	38413;38453		2.5775	0.27475	1	1623300			1847	4417	903	910	2386;2387	2386					0.07682226588269714
ATYKQLVIA	9	Unmodified	_ATYKQLVIA_					0	0	0		tr|A0A553ST48|A0A553ST48_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04300PE=4SV=1	tr|A0A553ST48|A0A553ST48_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04300PE=4SV=1	tr|A0A553ST48|A0A553ST48_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04300PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.2020141482353	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.328	1	56.737	56.237	57.237	1.4099								0	0	0	0.42693	1	23174	23174		1.0715	0	1				1848	16638	904	911	2388	2388					0.083312174826915
ATYVFLHTV	9	Unmodified	_ATYVFLHTV_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	525.2281982302666	2	525.784567	1049.55458	2.18	0.0011462	0.34985	0.00018395	2.5298	0.0013301	525.7847580421691	49.916	0.21123	49.916	49.813	50.024	0					11	6	2	0	0	0	0.029304	1	20830	20830		48.346	24.325	1	871590			1849	2187	905	912	2389	2389					0.031786444485987886
ATYVFLHTV	9	Unmodified	_ATYVFLHTV_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	525.2277099490166	2	525.784567	1049.55458	1.9054	0.0010018	-0.21865	-0.00011496	1.6868	0.00088688	525.7844083554652	49.309	0.23251	49.639	49.526	49.758	0.33019					14	7	2	0	0	0	0.078322	1	20682	20682		34.102	10.954	1	756590			1850	2187	905	912	2390	2390					0.031786444485987886
ATYVFLHTV	9	Unmodified	_ATYVFLHTV_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7848998904228	2	525.784567	1049.55458	2.1639	0.0011377	-0.65884	-0.00034641	1.505	0.00079133	525.7840525689389	47.801	0.34187	49.184	49.017	49.359	1.3825					19	10	2	0	0	0	0.033794	1	20057	20057		81.613	39.773	1	1817400			1851	2187	905	912	2391	2391					0.031786444485987886
ATYVFLHTV	9	Unmodified	_ATYVFLHTV_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7856933474541	2	525.784567	1049.55458	2.6768	0.0014074	0.060834	3.1986E-05	2.7376	0.0014394	525.7844476854069	47.383	0.34061	49.359	49.125	49.466	1.976					19	10	2	0	0	0	0.045797	1	19863	19863		71.134	42.647	1	2986500			1852	2187	905	912	2392	2392					0.031786444485987886
AVAAIVAAVV	10	Unmodified	_AVAAIVAAVV_					0	0	0		ENST00000467525.5_2_1:161479802-161487805:+|nuORF;ENST00000485778.1_1_1:161642751-161643868:+|nuORF;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;nc|ENSG00000244682|P31995-3|FCGR2C;nc|ENSG00000244682|P31995-2|FCGR2C;nc|ENSG00000072694|P31994-5|FCGR2B;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;ENSG00000072694|ENST00000358671|FCGR2B;nc|ENSG00000143226|P12318-2|FCGR2A;ENSG00000143226|ENST00000271450|FCGR2A;nc|ENSG00000244682|P31995|FCGR2C	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	883.5630981326103	1	883.56113	882.553853	1.751	0.0015471	-0.096398	-8.5174E-05	1.6546	0.0014619	883.5612073755866	74.287	0.41556	74.287	74.047	74.462	0					30	12	3	0	0	0	0.19438	1	30936	30936		49.669	0	1	3365000			1853	887	906	913	2393	2393					0.10787849799555715
AVAAIVAAVV	10	Unmodified	_AVAAIVAAVV_					0	0	0		ENST00000467525.5_2_1:161479802-161487805:+|nuORF;ENST00000485778.1_1_1:161642751-161643868:+|nuORF;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;nc|ENSG00000244682|P31995-3|FCGR2C;nc|ENSG00000244682|P31995-2|FCGR2C;nc|ENSG00000072694|P31994-5|FCGR2B;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;ENSG00000072694|ENST00000358671|FCGR2B;nc|ENSG00000143226|P12318-2|FCGR2A;ENSG00000143226|ENST00000271450|FCGR2A;nc|ENSG00000244682|P31995|FCGR2C	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	883.5612670779228	1	883.56113	882.553853	2.6069	0.0023033	-0.37752	-0.00033356	2.2293	0.0019698	883.560853165399	72.065	0.39506	73.888	73.756	74.151	1.824					35	12	4	0	0	0	0.19438	1	30221	30221		49.669	0	1	13012000			1854	887	906	913	2394	2394					0.10787849799555715
AVAAIVAAVV	10	Unmodified	_AVAAIVAAVV_					0	0	0		ENST00000467525.5_2_1:161479802-161487805:+|nuORF;ENST00000485778.1_1_1:161642751-161643868:+|nuORF;ENST00000473530.6_1_1:161559398-161565518:+|nuORF;ENST00000480308.5_1_1:161633004-161643868:+|nuORF;nc|ENSG00000244682|P31995-3|FCGR2C;nc|ENSG00000244682|P31995-2|FCGR2C;nc|ENSG00000072694|P31994-5|FCGR2B;nc|ENSG00000072694|P31994-2|FCGR2B;nc|ENSG00000072694|P31994-3|FCGR2B;nc|ENSG00000072694|P31994-4|FCGR2B;ENSG00000072694|ENST00000358671|FCGR2B;nc|ENSG00000143226|P12318-2|FCGR2A;ENSG00000143226|ENST00000271450|FCGR2A;nc|ENSG00000244682|P31995|FCGR2C	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	ENST00000467525.5_2_1:161479802-161487805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.2851135134697	2	442.284203	882.553853	2.8458	0.0012586	-1.1817	-0.00052264	1.6641	0.00073599	442.2836241505433	72.069	0.36357	73.893	73.756	74.119	1.824					27	11	3	0	0	0	0.28071	1	30240	30240		40.449	0	1	3186400			1855	887	906	913	2395	2395					0.10787849799555715
AVAFIVKLV	9	Unmodified	_AVAFIVKLV_					0	0	0			REV__nc|ENSG00000014257|P15309-2|ACP3	REV__nc|ENSG00000014257|P15309-2|ACP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.3193237185478	2	480.318046	958.621539	3.0437	0.0014619	-0.61686	-0.00029629	2.4268	0.0011656	480.31771815197754	70.342	0.44603	71.695	71.491	71.937	1.3536					31	13	3	0	0	0	0.20838	1	29542	29542		32.117	1.8922	1	5004600	+		1856	14383	907	914	2396	2396					0.14057299730370687
AVAFIVKLV	9	Unmodified	_AVAFIVKLV_					0	0	0			REV__nc|ENSG00000014257|P15309-2|ACP3	REV__nc|ENSG00000014257|P15309-2|ACP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.3188354372978	2	480.318046	958.621539	2.7595	0.0013254	-0.043252	-2.0775E-05	2.7162	0.0013046	480.3178758677074	69.759	0.44456	71.597	71.404	71.849	1.8378					30	13	3	0	0	0	0.20838	1	29290	29290		32.117	1.8922	1	3918500	+		1857	14383	907	914	2397	2397					0.14057299730370687
AVAGFVIASF	10	Unmodified	_AVAGFVIASF_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2752563357353	2	491.273835	980.533118	2.9245	0.0014367	-0.49934	-0.00024531	2.4251	0.0011914	491.2738399509835	72.515	0.36141	73.844	73.643	74.004	1.3297					31	11	4	0	0	0	0.10239	1	30462	30462		63.563	3.1733	1	3294100	+		1858	8499	908	915	2398	2398					0.04207259419899856
AVAGFVIASF	10	Unmodified	_AVAGFVIASF_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2745849490166	2	491.273835	980.533118	2.8186	0.0013847	-0.14985	-7.362E-05	2.6687	0.0013111	491.27383050888716	72.038	0.42276	73.862	73.665	74.088	1.824					31	13	3	0	0	0	0.10239	1	30214	30214		63.563	3.1733	1	4585500	+		1859	8499	908	915	2399	2399					0.04207259419899856
AVAGFVIASF	10	Unmodified	_AVAGFVIASF_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.273835	980.533118	2.8186	0.0013847	-0.14985	-7.362E-05	2.6687	0.0013111	491.27383050888716	72.038	0.42276	73.862	73.665	74.088	1.824	0.0089387	0.00015164	NaN	63.563	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4585500	+		1860	8499	908	915							0.04207259419899856
AVAKNMLDPI	10	Unmodified	_AVAKNMLDPI_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2973510622978	2	536.296985	1070.57942	2.8126	0.0015084	-1.1227	-0.0006021	1.6899	0.00090628	536.2966551440237	78.57	0.40005	79.837	79.666	80.066	1.2668					19	12	2	0	0	0	0.80568	1	32991	32991		11.64	2.2929	1	1450600			1861	3999	909	916	2400	2400					0.046949562596637406
AVAKNMLDPI	10	Unmodified	_AVAKNMLDPI_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1641113162041	2	536.296985	1070.57942	2.0285	0.0010879	-0.01529	-8.1997E-06	2.0132	0.0010797	536.2969844443855	78.116	0.34064	79.867	79.684	80.025	1.7514					22	10	3	0	0	0	0.12519	1	32755	32755		7.2892	0.93513	1	1007600			1862	3999	909	916	2401	2401					0.046949562596637406
AVAKNMLDPI	10	Unmodified	_AVAKNMLDPI_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	536.296985	1070.57942	1.7526	0.00093991	-2.1027	-0.0011277	-0.35009	-0.00018775	536.2960719043805	80.058	0.24744	80.058	79.918	80.165	0	0.15999	-0.0011415	NaN	7.2892	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	696030			1863	3999	909	916							0.046949562596637406
AVAQDLFQL	9	Unmodified	_AVAQDLFQL_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7763549685478	2	502.7742	1003.53385	2.7848	0.0014001	1.3934	0.00070055	4.1782	0.0021007	502.7754429984294	75.356	0.4881	76.662	76.374	76.862	1.3063					25	14	3	0	0	0	0.1735	1	31622	31622		36.044	9.1605	1	3491400	+		1864	10752	910	917	2402	2402					0.032220540689422705
AVASILQSL	9	Unmodified	_AVASILQSL_					0	0	0		ENST00000522492.1_1_5:148651531-148685943:+|nuORF;nc|ENSG00000157510|Q8TED9-3|AFAP1L1;ENST00000455574.6_1_5:148651531-148691878:+|nuORF;nc|ENSG00000157510|Q8TED9-2|AFAP1L1;ENSG00000157510|ENST00000296721|AFAP1L1	ENST00000522492.1_1_5:148651531-148685943:+|nuORF	ENST00000522492.1_1_5:148651531-148685943:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.2716247439384	2	451.271293	900.528032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.997	1	67.32	66.82	67.82	0.32297								0	0	0	0.30487	1	28045	28045		18.135	4.6271	1				1865	3474	911	918	2403	2403					0.07378955557271638
AVASSTIGIV	10	Unmodified	_AVASSTIGIV_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	917.5307494997978	1	917.530224	916.522947	2.1135	0.0019392	0.021432	1.9664E-05	2.1349	0.0019588	917.5303285383397	61.812	0.37846	61.812	61.582	61.96	0					24	11	3	0	0	0	0.068389	1	25777	25777		71.134	4.6769	1	2676400			1866	3492	912	919	2404	2404					0.06134651694662807
AVASSTIGIV	10	Unmodified	_AVASSTIGIV_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	917.5324584841728	1	917.530224	916.522947	2.4934	0.0022878	0.044905	4.1202E-05	2.5383	0.002329	917.5299663013645	60.101	0.42109	61.52	61.358	61.779	1.4196					35	13	3	0	0	0	0.04351	1	25251	25251		81.613	8.6451	1	14580000			1867	3492	912	919	2405	2405					0.06134651694662807
AVASSTIGIV	10	Unmodified	_AVASSTIGIV_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	917.5306884646416	1	917.530224	916.522947	2.8356	0.0026018	0.23144	0.00021236	3.0671	0.0028141	917.5303730902502	59.657	0.48265	61.626	61.405	61.887	1.969					33	15	3	0	0	0	0.04351	1	25012	25012		81.613	15.156	1	16561000			1868	3492	912	919	2406	2406					0.06134651694662807
AVCGNTHTV	9	Unmodified	_AVCGNTHTV_					0	0	0			REV__ENSG00000154856|ENST00000355285|APCDD1	REV__ENSG00000154856|ENST00000355285|APCDD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2166320681572	2	451.213452	900.412351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.615	1	32.896	32.396	33.396	1.2813								0	0	0	0.40188	1	13262	13262		8.5933	2.2392	1		+		1869	10482	913	920	2407	2407					-0.04183891565230624
AVDRSHDFFD	10	Unmodified	_AVDRSHDFFD_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7715331912041	2	604.770177	1207.5258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.419	1	52.813	52.313	53.313	1.3938								0	0	0	0.65773	1	21530	21530		7.2892	0	1		+		1870	11402	914	921	2408	2408					-0.06966124918471905
AVDWWALGV	9	Unmodified	_AVDWWALGV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000142875|P22694-5|PRKACB;ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;ENST00000587533.1_1_19:14208073-14208361:-|nuORF;nc|ENSG00000142875|P22694-8|PRKACB;ENSG00000072062|ENST00000308677|PRKACA;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-10|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000142875|P22694|PRKACB;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7656127810478	2	508.763635	1015.51272	4.5136	0.0022964	2.6008	0.0013232	7.1144	0.0036196	508.7646897984462	91.686	0.39574	92.622	92.434	92.83	0.93623					20	12	2	0	0	0	0.51832	1	38616	38616		14.582	3.7578	1	951730			1871	2108;3813	915	922	2409	2409					0.005580887600899587
AVDWWALGV	9	Unmodified	_AVDWWALGV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000142875|P22694-5|PRKACB;ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;ENST00000587533.1_1_19:14208073-14208361:-|nuORF;nc|ENSG00000142875|P22694-8|PRKACB;ENSG00000072062|ENST00000308677|PRKACA;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-10|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000142875|P22694|PRKACB;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7647582888603	2	508.763635	1015.51272	3.5481	0.0018051	1.9455	0.00098981	5.4936	0.0027949	508.76437239926935	91.297	0.36462	92.663	92.471	92.836	1.366					19	11	2	0	0	0	0.64949	1	38460	38460		9.3474	0.75416	1	864590			1872	2108;3813	915	922	2410	2410					0.005580887600899587
AVDWWALGV	9	Unmodified	_AVDWWALGV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000142875|P22694-5|PRKACB;ENSG00000142875|ENST00000370685|PRKACB;nc|ENSG00000142875|P22694-9|PRKACB;nc|ENSG00000142875|P22694-6|PRKACB;nc|ENSG00000142875|P22694-7|PRKACB;ENST00000587533.1_1_19:14208073-14208361:-|nuORF;nc|ENSG00000142875|P22694-8|PRKACB;ENSG00000072062|ENST00000308677|PRKACA;nc|ENSG00000072062|P17612-2|PRKACA;nc|ENSG00000142875|P22694-3|PRKACB;nc|ENSG00000142875|P22694-4|PRKACB;nc|ENSG00000142875|P22694-10|PRKACB;ENST00000536649.5_1_19:14208073-14223129:-|nuORF;nc|ENSG00000142875|P22694|PRKACB;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL;ENSG00000165059|ENST00000377276|PRKACG	ENSG00000120539|ENST00000375940|MASTL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	508.763635	1015.51272	2.2123	0.0011256	6.1147	0.0031109	8.327	0.0042365	508.76577252498777	92.788	0.23866	92.788	92.682	92.921	0	0.096872	0.0030036	NaN	14.582	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	734770			1873	2108;3813	915	922							0.005580887600899587
AVEFITAIT	9	Unmodified	_AVEFITAIT_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;ENST00000479783.1_1_2:237233333-237240271:-|nuORF	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	964.5397827029228	1	964.534975	963.527698	1.736	0.0016744	1.0845	0.0010461	2.8206	0.0027205	964.5364983719955	71.709	0.25041	72.032	71.881	72.132	0.32359					11	7	2	0	0	0	0.34572	1	30028	30028		23.148	1.4018	1	595370			1874	2525	916	923	2411	2411					0.04447535837402938
AVEMSYWW	8	Unmodified	_AVEMSYWW_					0	0	0			REV__ENST00000544118.5_1_11:61118583-61124082:-|nuORF	REV__ENST00000544118.5_1_11:61118583-61124082:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.2214843630791	3	357.824994	1070.45315	-1.0322	-0.00036934	4.277	0.0015304	3.2448	0.0011611	357.82596877521314	15.389	0.24733	16.215	16.076	16.324	0.82643					10	7	2	0	0	0	2.3239	1	6402	6402		3.9444	0	1	270150	+		1875	13796	917	924	2412	2412					-0.07925550245613522
AVEQNTKKEH	10	Unmodified	_AVEQNTKKEH_					0	0	0			REV__FGD5|p.G443Efs*20|1|0.21|ENSG00000154783|chr3:14820398-14820398|G/-|frameshift_variant	REV__FGD5|p.G443Efs*20|1|0.21|ENSG00000154783|chr3:14820398-14820398|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3078491091728	2	592.306926	1182.5993	0.3889	0.00023035	0.58241	0.00034496	0.97131	0.00057531	592.3074145397813	18.202	0.35875	19.65	19.492	19.85	1.448					23	11	3	0	0	0	0.6819	1	7549	7549		19.257	0	1	2190100	+		1876	10480	918	925	2413	2413					0.015304235240137132
AVEQNTKKEH	10	Unmodified	_AVEQNTKKEH_					0	0	0			REV__FGD5|p.G443Efs*20|1|0.21|ENSG00000154783|chr3:14820398-14820398|G/-|frameshift_variant	REV__FGD5|p.G443Efs*20|1|0.21|ENSG00000154783|chr3:14820398-14820398|G/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	592.306926	1182.5993	0.3889	0.00023035	0.58241	0.00034496	0.97131	0.00057531	592.3074145397813	18.202	0.35875	19.65	19.492	19.85	1.448	0.064174	0.00024759	NaN	19.257	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2190100	+		1877	10480	918	925							0.015304235240137132
AVERGFSLDLF	11	Unmodified	_AVERGFSLDLF_					0	0	0		ENST00000570049.5_1_16:67354603-67354729:-|nuORF	ENST00000570049.5_1_16:67354603-67354729:-|nuORF	ENST00000570049.5_1_16:67354603-67354729:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	627.2892333865166	2	627.32987	1252.64519	1.0956	0.0006873	2.1002	0.0013175	3.1958	0.0020048	627.330296774384	66.436	0.28623	68.325	68.15	68.436	1.8889					17	8	3	0	0	0	0.13727	1	27828	27828		30.637	5.2372	1	1066300			1878	7386	919	926	2414	2414					0.02897068706238315
AVERGFSLDLF	11	Unmodified	_AVERGFSLDLF_					0	0	0		ENST00000570049.5_1_16:67354603-67354729:-|nuORF	ENST00000570049.5_1_16:67354603-67354729:-|nuORF	ENST00000570049.5_1_16:67354603-67354729:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	627.32987	1252.64519	1.5154	0.00095067	1.1947	0.00074949	2.7101	0.0017002	627.3305992573587	66.884	0.25438	68.273	68.153	68.407	1.3887	-0.026083	-0.00023336	NaN	30.637	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1026800			1879	7386	919	926							0.02897068706238315
AVERTSKKL	9	Unmodified	_AVERTSKKL_					0	0	0		tr|A0A7D6ZWA2|A0A7D6ZWA2_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18195PE=3SV=1	tr|A0A7D6ZWA2|A0A7D6ZWA2_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18195PE=3SV=1	tr|A0A7D6ZWA2|A0A7D6ZWA2_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3151122927666	2	516.314023	1030.61349	2.5726	0.0013283	1.0898	0.00056268	3.6624	0.0018909	516.3145113483018	83.981	0.61716	83.981	83.689	84.306	0					71	19	5	0	0	0	0.76456	1	34899	34899		4.756	0	1	135590000			1880	17167	920	927	2415	2415					0.0994112074295117
AVFRLRKWIIF	11	Unmodified	_AVFRLRKWIIF_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.7466613650322	3	483.63448	1447.88161	2.6976	0.0013047	1.9589	0.0009474	4.6566	0.0022521	483.6359194166091	87.555	0.29598	87.555	87.434	87.73	0					11	9	2	0	0	0	0.14606	1	36627	36627		0.094841	0.094841	1	698570			1881	2529	921	928	2416	2416					0.17558465061210882
AVFRLRKWIIF	11	Unmodified	_AVFRLRKWIIF_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	483.7472411990166	3	483.63448	1447.88161	3.3661	0.001628	0.37708	0.00018237	3.7432	0.0018103	483.63452068576885	87.236	0.44122	87.48	87.361	87.802	0.24387					20	14	2	0	0	0	0.14606	1	36573	36573		0.094841	0	1	2412800			1882	2529	921	928	2417	2417					0.17558465061210882
AVFRLRKWIIF	11	Unmodified	_AVFRLRKWIIF_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000573175.1_1_17:4451225-4453465:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	483.63448	1447.88161	3.5547	0.0017192	-1.1278	-0.00054546	2.4269	0.0011737	483.63365973669534	86.457	0.23222	87.583	87.487	87.719	1.1265	0.043912	-0.0017548	NaN	0.094841	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211300			1883	2529	921	928							0.17558465061210882
AVGSASKLMEL	11	Unmodified	_AVGSASKLMEL_					0	0	0		nc|ENSG00000125337|Q9UIL4-2|KIF25;ENSG00000125337|ENST00000643607|KIF25	nc|ENSG00000125337|Q9UIL4-2|KIF25	nc|ENSG00000125337|Q9UIL4-2|KIF25	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.7346679568291	2	553.299724	1104.5849	2.5655	0.0014195	4.1684	0.0023064	6.7339	0.0037258	553.3024401496843	84.72	0.30266	86.316	86.158	86.46	1.5962					17	9	2	0	0	0	0.14187	1	35508	35508		22.736	5.6234	1	1003200			1884	2257	922	929	2418	2418					0.036786350515058075
AVGSIAATLK	10	Unmodified	_AVGSIAATLK_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;AKAP13-SPI1|1|fusion	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7859680056572	2	465.784567	929.554582	3.3588	0.0015645	1.306	0.00060829	4.6648	0.0021728	465.78460937772337	104.5	0.093536	104.66	104.6	104.7	0.16055					10	4	3	0	0	0	0.88314	1	44285	44285		3.2813	0.70383	1	26926000			1885	4161	923	930	2419	2419					0.08698644448611503
AVGSIAATLK	10	Unmodified	_AVGSIAATLK_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;AKAP13-SPI1|1|fusion	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	465.784567	929.554582	1.5628	0.00072794	2.2168	0.0010326	3.7796	0.0017605	465.78501572827116	104.55	0.092453	104.55	104.49	104.58	0	-0.054968	0.0012473	NaN	3.2813	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16913000			1886	4161	923	930							0.08698644448611503
AVGSIAATLK	10	Unmodified	_AVGSIAATLK_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;AKAP13-SPI1|1|fusion	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	465.784567	929.554582	3.4356	0.0016002	-0.17593	-8.1946E-05	3.2597	0.0015183	465.78383877695444	104.52	0.071976	104.58	104.53	104.6	0.056801	-0.032093	-0.00098174	NaN	3.2813	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13894000			1887	4161	923	930							0.08698644448611503
AVGSIAATLK	10	Unmodified	_AVGSIAATLK_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13;AKAP13-SPI1|1|fusion	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.784567	929.554582	3.5561	0.0016564	-0.19187	-8.937E-05	3.3642	0.001567	465.783757640185	104.47	0.093964	104.64	104.58	104.67	0.17309	0.031026	-0.00099659	NaN	3.2813	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20111000			1888	4161	923	930							0.08698644448611503
AVGSNRKNL	9	Unmodified	_AVGSNRKNL_					0	0	0			REV__TP53BP2|p.E303G|1|0.26|ENSG00000143514|chr1:223802819-223802819|T/C|missense_variant	REV__TP53BP2|p.E303G|1|0.26|ENSG00000143514|chr1:223802819-223802819|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	479.2790405154228	2	479.775065	957.535577	1.7977	0.0008625	-1.4689	-0.00070476	0.32876	0.00015773	479.77429305966893	78.123	0.49823	79.875	79.559	80.057	1.7514					28	15	2	0	0	0	0.11645	1	32806	32806		4.756	0	1	1291400	+		1889	14681	924	931	2420	2420					0.055111078775553324
AVGSNRKNL	9	Unmodified	_AVGSNRKNL_					0	0	0			REV__TP53BP2|p.E303G|1|0.26|ENSG00000143514|chr1:223802819-223802819|T/C|missense_variant	REV__TP53BP2|p.E303G|1|0.26|ENSG00000143514|chr1:223802819-223802819|T/C|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	479.775065	957.535577	2.1007	0.0010079	-6.0751	-0.0029147	-3.9744	-0.0019068	479.77196876236553	80.069	0.18764	80.069	79.978	80.165	0	0.14384	-0.0025528	NaN	4.756	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	555900	+		1890	14681	924	931							0.055111078775553324
AVGVTRQTIT	10	Unmodified	_AVGVTRQTIT_					0	0	0		tr|A0A7D6ZHY1|A0A7D6ZHY1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01460PE=4SV=1	tr|A0A7D6ZHY1|A0A7D6ZHY1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01460PE=4SV=1	tr|A0A7D6ZHY1|A0A7D6ZHY1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3041259646416	2	523.303655	1044.59276	1.4904	0.00077995	0.051481	2.694E-05	1.5419	0.00080689	523.3038467566931	70.036	2.0531	70.359	69.344	71.397	0.32224					160	65	3	0	0	0	0.87699	1	29526	29526		3.9444	0.3479	1	4121700			1891	17090	925	932	2421	2421					0.07224530363282611
AVGVYRSPI	9	Unmodified	_AVGVYRSPI_					0	0	0		nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;ENSG00000118058|ENST00000534358|KMT2A;ENST00000525408.1_1_11:118390286-118392884:+|nuORF	nc|ENSG00000118058|Q03164-2|KMT2A	nc|ENSG00000118058|Q03164-2|KMT2A	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2799255251884	2	481.276909	960.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.228	1	79.529	79.029	80.029	0.30047								0	0	0	0.40188	1	33128	33128		8.5933	3.3626	1				1892	2028	926	933	2422	2422					0.05741777651417124
AVIAALERVK	10	Unmodified	_AVIAALERVK_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1642944216728	2	535.340041	1068.66553	2.0828	0.001115	3.2891	0.0017608	5.3718	0.0028758	535.3418991636331	81.074	0.43256	81.365	81.152	81.584	0.29055					27	13	3	0	0	0	0.12519	1	33922	33922		7.2892	2.5332	1	828960			1893	305	927	934	2423	2423					0.13394284156697722
AVIDVGINRV	10	Unmodified	_AVIDVGINRV_					0	0	0		ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	ENSG00000065911|ENST00000394053|MTHFD2	ENSG00000065911|ENST00000394053|MTHFD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3167602419853	2	528.314023	1054.61349	2.3282	0.00123	0.73081	0.0003861	3.059	0.0016161	528.3141725815782	40.837	0.314	42.163	41.991	42.305	1.3254					14	9	2	0	0	0	0.65659	1	17137	17137		20.415	1.1575	1	735560			1894	796	928	935	2424	2424					0.08837120742941806
AVIDVGINRV	10	Unmodified	_AVIDVGINRV_					0	0	0		ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2	ENSG00000065911|ENST00000394053|MTHFD2	ENSG00000065911|ENST00000394053|MTHFD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	528.314023	1054.61349	2.2481	0.0011877	0.13923	7.3556E-05	2.3873	0.0012613	528.3140944429944	40.482	0.2199	42.345	42.233	42.453	1.8624	0.090994	-0.00023811	NaN	20.415	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	662480			1895	796	928	935							0.08837120742941806
AVIFVKVCI	9	Unmodified	_AVIFVKVCI_					0	0	0			REV__chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|32	REV__chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3052856326103	2	496.304081	990.59361	2.6262	0.0013034	0.072493	3.5979E-05	2.6987	0.0013394	496.30454655183854	63.388	0.91933	64.801	64.075	64.994	1.4134					42	29	3	0	0	0	0.22519	1	26592	26592		30.225	12.09	1	1461200	+		1896	8260	929	936	2425	2425					0.09793653478641318
AVIGGVVAV	9	Unmodified	_AVIGGVVAV_					0	0	0		ENST00000537140.5_1_11:115040311-115375169:-|nuORF;nc|ENSG00000182985|Q9BY67-5|CADM1;nc|ENSG00000182985|Q9BY67|CADM1;nc|ENSG00000182985|Q9BY67-4|CADM1;ENSG00000182985|ENST00000331581|CADM1;ENST00000545960.5_1_11:115040311-115061650:-|nuORF;ENST00000546000.1_1_11:115047196-115049577:-|nuORF	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	784.4927856326103	1	784.492716	783.485439	0.12669	9.9386E-05	0.27309	0.00021424	0.39978	0.00031363	784.4932397265028	51.149	0.27296	52.543	52.407	52.68	1.3938					10	8	2	0	0	0	0.11074	1	21440	21440		45.75	0	1	865060			1897	4636	930	937	2426	2426					0.08503605219709698
AVIKPLIN	8	Unmodified	_AVIKPLIN_					0	0	0		tr|A0A7D7A6J5|A0A7D7A6J5_9CLOTDUF1836domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10990PE=4SV=1	tr|A0A7D7A6J5|A0A7D7A6J5_9CLOTDUF1836domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10990PE=4SV=1	tr|A0A7D7A6J5|A0A7D7A6J5_9CLOTDUF1836domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.2875854372978	2	434.286746	866.558939	0.66916	0.00029061	1.8618	0.00080857	2.531	0.0010992	434.2875896410786	107.8	0.28674	107.8	107.68	107.97	0					61	15	6	0	0	0	0.89178	1	46340	46340		0.69038	0	1	1496799999.9999998			1898	17309	931	938	2427	2427					0.12032153662187284
AVIMGFKIL	9	Unmodified	_AVIMGFKIL_					0	0	0		tr|A0A7D6ZV75|A0A7D6ZV75_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14075PE=4SV=1	tr|A0A7D6ZV75|A0A7D6ZV75_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14075PE=4SV=1	tr|A0A7D6ZV75|A0A7D6ZV75_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3068420290947	2	496.304081	990.59361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.844	1	64.788	64.288	65.288	1.9444								0	0	0	0.22015	1	26370	26370		24.674	1.5255	1				1899	17147	932	939	2428	2428					0.09793653478641318
AVISRPFRIIR	11	Unmodified	_AVISRPFRIIR_					0	0	0		ENST00000261507.10_1_4:166248809-166254516:+|nuORF	ENST00000261507.10_1_4:166248809-166254516:+|nuORF	ENST00000261507.10_1_4:166248809-166254516:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4200927615166	2	664.419688	1326.82482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.889	1	99.889	99.389	100.39	0								0	0	0	0.63775	1	41816	41816		1.3295	0.13619	1				1900	5627	933	940	2429	2429					0.1744841750469277
AVIVSARLV	9	Unmodified	_AVIVSARLV_					0	0	0		ENSG00000149926|ENST00000380495|TLCD3B	ENSG00000149926|ENST00000380495|TLCD3B	ENSG00000149926|ENST00000380495|TLCD3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.3054077029228	2	464.302927	926.591301	2.7551	0.0012792	1.543	0.00071642	4.2981	0.0019956	464.3037505953451	61.597	0.31866	63.554	63.4	63.719	1.9571					22	9	3	0	0	0	0.066815	1	25836	25836		61.357	2.6787	1	2847900			1901	3256	934	941	2430	2430					0.12506941065191768
AVIYHHVF	8	Unmodified	_AVIYHHVF_					0	0	0			REV__ENSG00000198908|ENST00000457056|GPRASP3	REV__ENSG00000198908|ENST00000457056|GPRASP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2687560915947	2	493.266345	984.518136	2.5485	0.0012571	1.7586	0.00086746	4.3071	0.0021246	493.26738598774585	80.211	0.59217	80.512	80.289	80.881	0.30047					27	18	2	0	0	0	0.88958	1	33492	33492		2.8892	0.31174	1	1071500	+		1902	11754	935	942	2431	2431					0.025258123425601298
AVKEAIKG	8	Unmodified	_AVKEAIKG_					0	0	0		nc|ENSG00000141052|Q8IZQ8-2|MYOCD;nc|ENSG00000141052|Q8IZQ8|MYOCD;ENSG00000141052|ENST00000425538|MYOCD	nc|ENSG00000141052|Q8IZQ8-2|MYOCD	nc|ENSG00000141052|Q8IZQ8-2|MYOCD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	408.5652953982353	2	408.252903	814.491253	2.1521	0.00087861	-2.4164	-0.00098652	-0.26431	-0.00010791	408.25181210908306	65.711	0.33675	67.11	66.91	67.247	1.3989					18	10	2	0	0	0	2.3239	1	27587	27587		4.756	0	1	1042300			1903	2947	936	943	2432	2432					0.07658703731385685
AVKEKALHF	9	Unmodified	_AVKEKALHF_					0	0	0		ENST00000419314.5_1_7:64498910-64527388:+|nuORF	ENST00000419314.5_1_7:64498910-64527388:+|nuORF	ENST00000419314.5_1_7:64498910-64527388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2066833376884	3	348.206315	1041.59712	0.35938	0.00012514	-0.99481	-0.0003464	-0.63543	-0.00022126	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.80869	1	12802	12802		2.9952	0	1	7605500			1904	6435	937	944	2433	2433					0.07798039576823612
AVKKDIEEKL	10	Unmodified	_AVKKDIEEKL_					0	0	0			REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2848998904228	3	391.567689	1171.68124	1.773	0.00069424	-0.69273	-0.00027125	1.0802	0.00042299	391.56737540663863	41.719	0.39879	42.038	41.826	42.225	0.31862					38	12	4	0	0	0	0.12556	1	17583	17583		0.69767	0	1	5507300	+		1905	15397	938	945	2434	2434					0.10226525883081194
AVKKVIKVG	9	Unmodified	_AVKKVIKVG_					0	0	0		ENST00000466999.1_1_20:2640164-2640466:-|nuORF;ENST00000492240.5_1_20:2639399-2640466:-|nuORF;nc|ENSG00000101365|O43837-3|IDH3B;nc|ENSG00000101365|O43837-2|IDH3B;ENSG00000101365|ENST00000380843|IDH3B	ENST00000466999.1_1_20:2640164-2640466:-|nuORF	ENST00000466999.1_1_20:2640164-2640466:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	941.6540405154228	1	941.650613	940.643337	3.0172	0.0028412	2.1401	0.0020152	5.1573	0.0048564	941.6510395693683	108.19	0.14522	108.35	108.28	108.42	0.15781					23	10	3	0	0	0	0.83753	1	46692	46692		1.8442	0	1	209630000			1906	1342	939	946	2435	2435					0.17064104478947684
AVKKVIKVG	9	Unmodified	_AVKKVIKVG_					0	0	0		ENST00000466999.1_1_20:2640164-2640466:-|nuORF;ENST00000492240.5_1_20:2639399-2640466:-|nuORF;nc|ENSG00000101365|O43837-3|IDH3B;nc|ENSG00000101365|O43837-2|IDH3B;ENSG00000101365|ENST00000380843|IDH3B	ENST00000466999.1_1_20:2640164-2640466:-|nuORF	ENST00000466999.1_1_20:2640164-2640466:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	941.6571533083916	1	941.650613	940.643337	3.4504	0.003249	0.86358	0.00081319	4.3139	0.0040622	941.6502453001056	108.16	0.09803	108.32	108.27	108.37	0.15795					32	11	3	0	0	0	0.83753	1	46618	46618		1.8442	0	1	127960000			1907	1342	939	946	2436	2436					0.17064104478947684
AVLALQLA	8	Unmodified	_AVLALQLA_					0	0	0		ENSG00000081791|ENST00000432126|DELE1	ENSG00000081791|ENST00000432126|DELE1	ENSG00000081791|ENST00000432126|DELE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7580139040947	2	399.757821	797.501089	1.8932	0.0007568	-3.1222	-0.0012481	-1.2291	-0.00049134	399.7566850166143	78.232	0.51041	78.541	78.259	78.769	0.30933					47	15	4	0	0	0	0.89176	1	32681	32681		0.79363	0	1	6244400			1908	1023	940	947	2437	2437					0.09423891736742007
AVLLLHMPE	9	Unmodified	_AVLLLHMPE_					0	0	0		nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;ENSG00000152061|ENST00000681986|RABGAP1L;ENSG00000011454|ENST00000373647|RABGAP1	nc|ENSG00000152061|Q5R372-4|RABGAP1L	nc|ENSG00000152061|Q5R372-4|RABGAP1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1023.570666491985	1	1022.57031	1021.56304	-0.28034	-0.00028667	0.89104	0.00091115	0.6107	0.00062448	1023.5736433156482	16.533	0.078077	17.431	17.387	17.465	0.89794					5	3	2	0	0	0	0.83213	1	6884	6884		2.0598	0	1	642760			1909	3309	941	948	2438	2438					0.0531187509358233
AVLMKGKP	8	Unmodified	_AVLMKGKP_					0	0	0		ENST00000550033.5_1_12:53701834-53703447:-|nuORF;nc|ENSG00000094914|Q9NRG9-2|AAAS;ENSG00000094914|ENST00000209873|AAAS	ENST00000550033.5_1_12:53701834-53703447:-|nuORF	ENST00000550033.5_1_12:53701834-53703447:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	843.5234863162041	1	843.512071	842.504795	1.8675	0.0015752	3.199	0.0026984	5.0665	0.0042737	843.5199603886734	66.942	0.38854	67.266	67.001	67.389	0.32449					18	12	2	0	0	0	0.87803	1	28019	28019		10.183	0	1	552670			1910	1178	942	949	2439	2439					0.07724238238972703
AVLNELVSV	9	Unmodified	_AVLNELVSV_					0	0	0		ENST00000449367.5_1_7:100883509-100888309:-|nuORF;ENSG00000214253|ENST00000223136|FIS1	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2773925662041	2	472.276575	942.538597	3.1204	0.0014737	-0.85534	-0.00040396	2.2651	0.0010697	472.27618167191014	62.989	0.37085	64.402	64.195	64.566	1.4134					18	11	2	0	0	0	0.19075	1	26409	26409		34.102	5.0209	1	1522400			1911	5238	943	950	2440	2440					0.06502938211713172
AVLNELVSV	9	Unmodified	_AVLNELVSV_					0	0	0		ENST00000449367.5_1_7:100883509-100888309:-|nuORF;ENSG00000214253|ENST00000223136|FIS1	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	ENST00000449367.5_1_7:100883509-100888309:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2770568728447	2	472.276575	942.538597	3.2566	0.001538	-2.5872	-0.0012219	0.6694	0.00031614	472.2760976021326	62.455	0.43224	64.409	64.204	64.637	1.9535					27	13	3	0	0	0	0.19075	2	26241	26191;26241		34.102	12.356	1	1463000			1912	5238	943	950	2441;2442	2442					0.06502938211713172
AVLQQHHVKL	10	Unmodified	_AVLQQHHVKL_					0	0	0		ENSG00000186648|ENST00000342740|CARMIL3	ENSG00000186648|ENST00000342740|CARMIL3	ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	586.8508178591728	2	586.848564	1171.68258	1.647	0.00096653	-0.45915	-0.00026945	1.1878	0.00069707	586.8479562054321	41.738	0.36621	42.059	41.861	42.227	0.32058					27	11	3	0	0	0	0.5476	1	17482	17482		25.399	0.40835	1	1962800			1913	4800	944	951	2443	2443					0.10360204762514513
AVLSKDGELLK	11	Unmodified	_AVLSKDGELLK_					0	0	0		tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.8483154177666	2	586.847896	1171.68124	1.8862	0.0011069	0.11183	6.5625E-05	1.9981	0.0011726	586.8479537387357	42.127	0.34246	42.127	41.98	42.322	0					23	10	3	0	0	0	0.03983	1	17656	17656		70.332	7.1045	1	2018700			1914	16214	945	952	2444	2444					0.10226525883103932
AVLSKDGELLK	11	Unmodified	_AVLSKDGELLK_					0	0	0		tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	586.8486205935478	2	586.847896	1171.68124	1.647	0.00096653	0.68033	0.00039925	2.3273	0.0013658	586.8479562054321	41.738	0.36621	42.059	41.861	42.227	0.32058					27	11	3	0	0	0	0.21817	1	17532	17532		38.615	3.0025	1	1962800			1915	16214	945	952	2445	2445					0.10226525883103932
AVLSKDGELLK	11	Unmodified	_AVLSKDGELLK_					0	0	0		tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.8491088747978	2	586.847896	1171.68124	2.326	0.001365	-0.87279	-0.00051219	1.4533	0.00085284	586.8471986301589	40.004	0.30563	41.315	41.177	41.483	1.3102					23	9	3	0	0	0	0.0736	2	16761	16761;16812		61.602	6.3673	1	5370300			1916	16214	945	952	2446;2447	2446					0.10226525883103932
AVLSKDGELLK	11	Unmodified	_AVLSKDGELLK_					0	0	0		tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.8490478396416	2	586.847896	1171.68124	1.6579	0.00097295	-0.48665	-0.00028559	1.1713	0.00068735	586.8473655254617	39.614	0.30624	41.477	41.278	41.584	1.8624					25	9	4	0	0	0	0.0736	2	16578	16578;16629		61.602	12.075	1	4148600			1917	16214	945	952	2448;2449	2448					0.10226525883103932
AVLTFLFPL	9	Unmodified	_AVLTFLFPL_					0	0	0			REV__SORL1-TECTA|2|fusion	REV__SORL1-TECTA|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8082153201103	2	510.810054	1019.60555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.491	1	84.679	84.179	85.179	1.1879								0	0	0	0.35192	1	35043	35043		13.508	0.97634	1		+		1918	10025	946	953	2450	2450					0.09653593493464996
AVLTTRTPI	9	Unmodified	_AVLTTRTPI_					0	0	0			REV__chr20:47172867-47180815|112|16.05|0.26|5.93|+|0|EYA2,EYA2|1	REV__chr20:47172867-47180815|112|16.05|0.26|5.93|+|0|EYA2,EYA2|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.2542602419853	2	486.297842	970.581131	1.8832	0.00091577	-2.6578	-0.0012925	-0.77463	-0.0003767	486.2974363764975	50.632	0.21448	52.026	51.924	52.139	1.3938					9	6	2	0	0	0	0.10346	1	21201	21201		21.537	1.1224	1	472120	+		1919	8308	947	954	2451	2451					0.09466333339958055
AVMLFKTLL	9	Unmodified	_AVMLFKTLL_					0	0	0		ENST00000377602.4_1_10:17373471-17432557:-|nuORF	ENST00000377602.4_1_10:17373471-17432557:-|nuORF	ENST00000377602.4_1_10:17373471-17432557:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.3185912966728	2	518.317189	1034.61982	1.9949	0.001034	1.2332	0.00063917	3.2281	0.0016732	518.3178068110755	79.501	0.8958	79.501	79.206	80.102	0					81	28	4	0	0	0	0.01705	2	33106	33058;33106		101.72	20.783	1	11571000			1920	6199	948	955	2452;2453	2453					0.10389922650119843
AVMLFKTLL	9	Unmodified	_AVMLFKTLL_					0	0	0		ENST00000377602.4_1_10:17373471-17432557:-|nuORF	ENST00000377602.4_1_10:17373471-17432557:-|nuORF	ENST00000377602.4_1_10:17373471-17432557:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3181030154228	2	518.317189	1034.61982	2.6638	0.0013807	0.65477	0.00033938	3.3185	0.0017201	518.3176131956362	77.749	1.5071	79.03	78.791	80.299	1.2809					89	48	2	0	0	0	0.046276	1	32734	32734		70.716	20.783	1	56267000			1921	6199	948	955	2454	2454					0.10389922650119843
AVMLHCMP	8	Unmodified	_AVMLHCMP_					0	0	0			REV__ENSG00000250799|ENST00000653904|PRODH2	REV__ENSG00000250799|ENST00000653904|PRODH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416503787041	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0192	1	4.7644	4.2644	5.2644	0.74525								0	0	0	1.0178	1	1666	1666		0.45834	0	1		+		1922	11952	949	956	2455	2455					-0.05219913815653854
AVMTDIIPV	9	Unmodified	_AVMTDIIPV_					0	0	0			REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	958.5331298708916	1	958.527781	957.520504	1.6417	0.0015736	0.39474	0.00037837	2.0364	0.001952	958.5272423209587	72.158	0.25302	72.158	72.016	72.269	0					11	7	2	0	0	0	0.13437	1	30058	30058		40.449	0	1	572270	+		1923	14876	950	957	2456	2456					0.04004479965351493
AVMTDIIPV	9	Unmodified	_AVMTDIIPV_					0	0	0			REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	958.527781	957.520504	1.6417	0.0015736	0.39474	0.00037837	2.0364	0.001952	958.5272423209587	72.158	0.25302	72.158	72.016	72.269	0	0.13017	0.0005336	NaN	40.449	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572270	+		1924	14876	950	957							0.04004479965351493
AVMTDIIPV	9	Unmodified	_AVMTDIIPV_					0	0	0			REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	REV__tr|A0A553SU75|A0A553SU75_NIACISTASdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06415PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	958.527781	957.520504	1.6968	0.0016265	-0.53552	-0.00051331	1.1613	0.0011131	958.5268024420363	71.574	0.28618	71.897	71.751	72.037	0.32359	-0.13017	-0.00035808	NaN	40.449	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	471230	+		1925	14876	950	957							0.04004479965351493
AVMTDLPVI	9	Unmodified	_AVMTDLPVI_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7680847048759	2	479.767529	957.520504	3.094	0.0014844	-1.209	-0.00058006	1.885	0.00090434	479.7667001654714	70.503	0.35413	71.856	71.648	72.002	1.3536					17	10	2	0	0	0	0.078975	1	29596	29596		56.541	16.093	1	1644500			1926	754	951	958	2457	2457					0.04004479965340124
AVMTDLPVI	9	Unmodified	_AVMTDLPVI_					0	0	0		nc|ENSG00000061987|Q7Z3U7-2|MON2;nc|ENSG00000061987|Q7Z3U7-6|MON2;ENST00000547095.5_1_12:62864501-62986526:+|nuORF;nc|ENSG00000061987|Q7Z3U7-5|MON2;ENSG00000061987|ENST00000393630|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	nc|ENSG00000061987|Q7Z3U7-2|MON2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7678100466728	2	479.767529	957.520504	2.5587	0.0012276	-1.3854	-0.00066468	1.1733	0.0005629	479.7665782563447	69.963	0.35464	71.801	71.624	71.979	1.8378					18	10	2	0	0	0	0.20838	2	29336	29336;29387		32.117	6.5389	1	1661700			1927	754	951	958	2458;2459	2458					0.04004479965340124
AVNLLRLFLH	10	Unmodified	_AVNLLRLFLH_					0	0	0			REV__ENST00000323078.7_1_7:150034543-150034807:+|nuORF	REV__ENST00000323078.7_1_7:150034543-150034807:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2504150271416	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.692	1	39.988	39.488	40.488	1.2961								0	0	0	0.66017	1	16235	16235		4.1895	0.60244	1		+		1928	12415	952	959	2460	2460					0.13413965801987615
AVQDFLHEI	9	Unmodified	_AVQDFLHEI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1615478396416	2	536.277106	1070.53966	2.0287	0.0010879	-1.882	-0.0010093	0.14665	7.8643E-05	536.2765681476283	60.311	0.15313	60.311	60.227	60.38	0					6	4	2	0	0	0	0.11645	1	25175	25175		4.756	0.42677	1	462520			1929	4351	953	960	2461	2461					0.007211525806042118
AVQRALYYAE	10	Unmodified	_AVQRALYYAE_					0	0	0		tr|A0A553SIG4|A0A553SIG4_NIACIAllantoinaseOS=NialliacirculansOX=1397GN=allBPE=3SV=1	tr|A0A553SIG4|A0A553SIG4_NIACIAllantoinaseOS=NialliacirculansOX=1397GN=allBPE=3SV=1	tr|A0A553SIG4|A0A553SIG4_NIACIAllantoinaseOS=NialliacirculansOX=1397GN=allBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3079101443291	2	592.308938	1182.60332	0.6804	0.00040301	-2.3717	-0.0014048	-1.6913	-0.0010018	592.3076365390702	18.642	0.389	19.621	19.506	19.895	0.97922					22	12	3	0	0	0	0.77604	1	7746	7746		14.838	0.93222	1	1444400			1930	16197	954	961	2462	2462					0.019325130177094252
AVQRRSRLQRR	11	Unmodified	_AVQRRSRLQRR_					0	0	0		nc|ENSG00000172830|Q8TE77-2|SSH3;ENSG00000172830|ENST00000308127|SSH3;SSH3|p.S286Vfs*74|1|0.3|ENSG00000172830|chr11:67307910-67307910|A/-|frameshift_variant;nc|ENSG00000172830|Q8TE77-4|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	475.9613220095634	3	475.958908	1424.85489	2.4941	0.0011871	3.0478	0.0014506	5.5419	0.0026377	475.9612371518722	52.56	2.4165	52.883	52.432	54.849	0.32285					209	79	6	0	0	0	0.96769	1	22123	22123		2.6312	0	1	373100000			1931	4255	955	962	2463	2463					0.15946169222593198
AVRMPSPFR	9	Unmodified	_AVRMPSPFR_					0	0	0		ENST00000491720.5_1_2:182783318-182792989:+|nuORF;ENST00000440623.5_1_2:182781645-182792989:+|nuORF;nc|ENSG00000138434|P28290-2|ITPRID2;nc|ENSG00000138434|P28290-3|ITPRID2;ENSG00000138434|ENST00000431877|ITPRID2	ENST00000491720.5_1_2:182783318-182792989:+|nuORF	ENST00000491720.5_1_2:182783318-182792989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	354.1947204470634	3	354.195533	1059.56477	-1.7013	-0.0006026	-1.0124	-0.0003586	-2.7138	-0.0009612	354.19521469894056	26.877	1.4414	26.877	26.506	27.948	0					150	47	5	0	0	0	0.081597	6	11187	11140;11187;11238;11288;11327;11367		55.503	22.603	1	27241000			1932	2829	956	963	2464;2465;2466;2467;2468;2469	2465					0.03736928902185355
AVRRRRKRRTP	11	Unmodified	_AVRRRRKRRTP_					0	0	0		chr20:63737902-63738012|113|11.69|0.56|4.37|+|1|LIME1,None|1	chr20:63737902-63738012|113|11.69|0.56|4.37|+|1|LIME1,None|1	chr20:63737902-63738012|113|11.69|0.56|4.37|+|1|LIME1,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	726.4677612185478	2	726.466358	1450.91816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.05	1	115.23	114.73	115.73	0.18399								0	0	0	0.63775	1	49829	49829		0.35063	0.043601	1				1933	250	957	964	2470	2470					0.21074154730467853
AVRRVLKRDLK	11	Unmodified	_AVRRVLKRDLK_					0	0	0		ENSG00000120438|ENST00000321394|TCP1	ENSG00000120438|ENST00000321394|TCP1	ENSG00000120438|ENST00000321394|TCP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	677.4480468630791	2	677.443695	1352.87284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.16	1	107.32	106.82	107.82	0.15781								0	0	0	0.63775	1	46022	46022		1.1933	0.84271	1				1934	2103	958	965	2471	2471					0.21051491424736923
AVSDYVLVE	9	Unmodified	_AVSDYVLVE_					0	0	0			REV__tr|A0A553SGB1|A0A553SGB1_NIACILPXTGcellwallanchordomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10515PE=3SV=1	REV__tr|A0A553SGB1|A0A553SGB1_NIACILPXTGcellwallanchordomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10515PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5134765505791	1	994.509154	993.501877	4.0242	0.0040021	-0.8742	-0.0008694	3.15	0.0031327	994.5080897900589	65.446	0.34099	66.845	66.632	66.973	1.3989					22	10	3	0	0	0	0.12174	1	27428	27428		42.095	0	1	1618800	+		1935	14738	959	966	2472	2472					0.004866415951369163
AVSLTLGEIIK	11	Unmodified	_AVSLTLGEIIK_					0	0	0		ENSG00000185467|ENST00000327442|KPNA7	ENSG00000185467|ENST00000327442|KPNA7	ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	572.3538085818291	2	572.352814	1142.69108	1.5539	0.00088937	1.0953	0.00062692	2.6492	0.0015163	572.353241304343	41.952	0.44063	41.952	41.724	42.165	0					28	13	3	0	0	0	0.23777	1	17555	17555		37.075	10.807	1	1465300			1936	4747	960	967	2473	2473					0.12543713888476304
AVSLTLGEIIK	11	Unmodified	_AVSLTLGEIIK_					0	0	0		ENSG00000185467|ENST00000327442|KPNA7	ENSG00000185467|ENST00000327442|KPNA7	ENSG00000185467|ENST00000327442|KPNA7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	572.352814	1142.69108	1.6222	0.00092846	1.3748	0.00078684	2.9969	0.0017153	572.3535552668794	41.353	0.26677	41.67	41.527	41.794	0.31683	-0.14118	0.00012186	NaN	37.075	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420060			1937	4747	960	967							0.12543713888476304
AVSLTLIRKTI	11	Unmodified	_AVSLTLIRKTI_					0	0	0			REV__tr|A0A7D6VNL7|A0A7D6VNL7_9CLOTATP-dependentRecD2DNAhelicaseOS=ClostridiumintestinaleOX=36845GN=recD2PE=3SV=1	REV__tr|A0A7D6VNL7|A0A7D6VNL7_9CLOTATP-dependentRecD2DNAhelicaseOS=ClostridiumintestinaleOX=36845GN=recD2PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5993835330009	3	405.599212	1213.77581	0.87773	0.00035601	-2.5198	-0.001022	-1.642	-0.00066601	405.59817874366803	90.418	0.4577	90.418	90.225	90.682	0					44	14	4	0	0	0	1.0191	1	37765	37765		2.6312	0.88896	1	6226700	+		1938	15338	961	968	2474	2474					0.17747084425081994
AVTDTLAVL	9	Unmodified	_AVTDTLAVL_					0	0	0			REV__ENST00000595954.1_1_19:57276734-57301433:+|nuORF	REV__ENST00000595954.1_1_19:57276734-57301433:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	902.5233642458916	1	902.519325	901.512048	1.8281	0.0016499	1.4694	0.0013261	3.2975	0.002976	902.5206871077024	64.414	0.35369	64.414	64.238	64.592	0					17	10	2	0	0	0	0.11478	1	26835	26835		44.407	6.2558	1	1270500	+		1939	14091	962	969	2475	2475					0.057352493203779886
AVTDTLAVL	9	Unmodified	_AVTDTLAVL_					0	0	0			REV__ENST00000595954.1_1_19:57276734-57301433:+|nuORF	REV__ENST00000595954.1_1_19:57276734-57301433:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	902.5209838747978	1	902.519325	901.512048	1.9695	0.0017775	1.2278	0.0011081	3.1973	0.0028856	902.5209118093302	64.024	0.3193	64.353	64.146	64.466	0.32899					21	9	3	0	0	0	0.069258	1	26785	26785		60.39	6.814	1	1118700	+		1940	14091	962	969	2476	2476					0.057352493203779886
AVTGILVQL	9	Unmodified	_AVTGILVQL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	913.5745117068291	1	913.571694	912.564418	2.4677	0.0022544	0.50307	0.00045959	2.9708	0.002714	913.5719881005824	87.744	0.47717	87.744	87.49	87.967	0					44	15	4	0	0	0	0.002761	3	36663	36618;36663;36718		128.37	7.915	1	18322000			1941	3745	963	970	2477;2478;2479	2478					0.10463832454001931
AVTGILVQL	9	Unmodified	_AVTGILVQL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	913.5707885622978	1	913.571694	912.564418	2.6533	0.002424	0.36306	0.00033168	3.0163	0.0027557	913.5717081135787	87.239	0.4258	87.483	87.314	87.74	0.24387					39	14	4	0	0	0	0.002761	2	36544	36544;36644		128.37	7.915	1	13976000			1942	3745	963	970	2480;2481	2480					0.10463832454001931
AVTGILVQL	9	Unmodified	_AVTGILVQL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	913.5690185427666	1	913.571694	912.564418	3.1304	0.0028598	-2.3395	-0.0021373	0.79088	0.00072253	913.5692075937827	86.398	0.47617	87.525	87.299	87.775	1.1265					35	18	3	0	0	0	0.0066739	3	36326	36326;36382;36442		115.69	7.695	1	42699000			1943	3745	963	970	2482;2483;2484	2482					0.10463832454001931
AVTGLLVPSL	10	Unmodified	_AVTGLLVPSL_					0	0	0			REV__RFT1|p.F475V|1|0.42|ENSG00000163933|chr3:53092404-53092404|A/C|missense_variant	REV__RFT1|p.F475V|1|0.42|ENSG00000163933|chr3:53092404-53092404|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3055908083916	2	485.302593	968.590633	1.6781	0.0008144	1.9791	0.00096048	3.6573	0.0017749	485.3038127948826	66.001	0.36975	67.91	67.706	68.076	1.9085					26	11	3	0	0	0	0.076926	1	27680	27680		68.081	0.73685	1	2218000	+		1944	14612	964	971	2485	2485					0.10508101625475774
AVTILIPELRA	11	Unmodified	_AVTILIPELRA_					0	0	0		ENST00000470101.1_1_X:19378869-19390989:-|nuORF;nc|ENSG00000180815|Q6ZN16-2|MAP3K15;nc|ENSG00000180815|Q6ZN16-3|MAP3K15;ENST00000518578.5_1_X:19378869-19431499:-|nuORF;ENSG00000180815|ENST00000338883|MAP3K15	ENST00000470101.1_1_X:19378869-19390989:-|nuORF	ENST00000470101.1_1_X:19378869-19390989:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2513000369072	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.055	1	71.893	71.393	72.393	1.8378								0	0	0	0.63775	1	29388	29388		1.3296	0.25818	1				1945	4557	965	972	2486	2486					0.14403109016689086
AVTNIRRLPR	10	Unmodified	_AVTNIRRLPR_					0	0	0			REV__chr1:171601204-171614798|177|22.54|0.04|9.21|+|0|TE_info:Harlequin-int,Harlequin-int_dup65,ERV1,LTR,donor,+,171600924,171601204|None,MYOCOS|4	REV__chr1:171601204-171614798|177|22.54|0.04|9.21|+|0|TE_info:Harlequin-int,Harlequin-int_dup65,ERV1,LTR,donor,+,171600924,171601204|None,MYOCOS|4	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2516967654228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.72	1	76.026	75.526	76.526	1.3063								0	0	0	0.66035	1	31361	31361		3.8763	0.28927	1		+		1946	8211	966	973	2487	2487					0.14134698402403956
AVTSVEGERLR	11	Unmodified	_AVTSVEGERLR_					0	0	0		ENST00000328914.4_1_7:4804068-4804185:+|nuORF	ENST00000328914.4_1_7:4804068-4804185:+|nuORF	ENST00000328914.4_1_7:4804068-4804185:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	608.8367797732353	2	608.835851	1215.65715	1.9835	0.0012076	3.5808	0.0021801	5.5643	0.0033878	608.8378400324201	77.022	0.3149	77.338	77.103	77.418	0.31653					15	9	3	0	0	0	0.82375	1	32218	32218		14.405	1.5328	1	1684100			1947	5882	967	974	2488	2488					0.05794685449427561
AVTSVEGERLR	11	Unmodified	_AVTSVEGERLR_					0	0	0		ENST00000328914.4_1_7:4804068-4804185:+|nuORF	ENST00000328914.4_1_7:4804068-4804185:+|nuORF	ENST00000328914.4_1_7:4804068-4804185:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	608.835851	1215.65715	2.4349	0.0014825	5.9545	0.0036253	8.3894	0.0051078	609.3423697695664	76.091	0.11623	77.385	77.341	77.458	1.2938	0.023541	0.0016973	NaN	14.405	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445450			1948	5882	967	974							0.05794685449427561
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.7702514529228	2	482.771126	963.527698	1.8445	0.00089046	0.055387	2.6739E-05	1.8999	0.00091719	482.77096496019203	72.233	0.31621	72.233	72.08	72.396	0					16	9	2	0	0	0	0.11478	2	30057	30057;30104		44.407	17.523	1	1315200			1949	428	968	975	2489;2490	2489					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	964.5388061404228	1	964.534975	963.527698	1.6522	0.0015936	2.1817	0.0021043	3.8339	0.0036979	964.535709743363	72.222	0.25201	72.222	72.08	72.332	0					11	7	2	0	0	0	0.13873	1	30080	30080		39.957	7.6518	1	983890			1950	428	968	975	2491	2491					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.7724792361259	2	482.771126	963.527698	2.4989	0.0012064	-0.042882	-2.0702E-05	2.456	0.0011857	482.7709099353519	71.685	0.31375	72.008	71.881	72.195	0.32358					24	9	3	0	0	0	0.11478	2	30024	29970;30024		44.407	15.591	1	1366000			1951	428	968	975	2492;2493	2493					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.7721740603447	2	482.771126	963.527698	3.1279	0.0015101	0.1243	6.001E-05	3.2522	0.0015701	482.7710306349192	70.57	0.41672	71.924	71.744	72.161	1.3536					27	12	3	0	0	0	0.11478	2	29606	29606;29659		44.407	17.523	1	3787100			1952	428	968	975	2494;2495	2494					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	964.5367919802666	1	964.534975	963.527698	2.5039	0.0024151	1.1758	0.0011341	3.6798	0.0035493	964.5356311014917	70.599	0.32318	71.952	71.775	72.098	1.3536					15	9	2	0	0	0	0.083604	1	29612	29612		54.774	14.816	1	2917500			1953	428	968	975	2496	2496					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7713806033134	2	482.771126	963.527698	2.1314	0.001029	0.41459	0.00020015	2.546	0.0012291	482.7709041863433	70.12	0.38523	71.958	71.751	72.136	1.8378					28	11	3	0	0	0	0.1735	2	29395	29395;29447		36.044	15.173	1	3491900			1954	428	968	975	2497;2498	2497					0.044475358374370444
AVVEFLTSV	9	Unmodified	_AVVEFLTSV_					0	0	0		nc|ENSG00000113360|Q9NRR4-3|DROSHA;nc|ENSG00000113360|Q9NRR4-2|DROSHA;nc|ENSG00000113360|Q9NRR4-4|DROSHA;DROSHA|p.E1354Vfs*16|1|0.29|ENSG00000113360|chr5:31401496-31401497|-/TGTA|frameshift_variant;ENSG00000113360|ENST00000344624|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	nc|ENSG00000113360|Q9NRR4-3|DROSHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	964.5408203005791	1	964.534975	963.527698	2.2677	0.0021873	0.069964	6.7483E-05	2.3377	0.0022548	964.5351764288899	70.156	0.35329	71.994	71.751	72.104	1.8378					17	10	2	0	0	0	0.20671	1	29414	29414		32.305	6.9062	1	1576700			1955	428	968	975	2499	2499					0.044475358374370444
AVVQEDGPQV	10	Unmodified	_AVVQEDGPQV_					0	0	0		ENSG00000152591|ENST00000651931|DSPP	ENSG00000152591|ENST00000651931|DSPP	ENSG00000152591|ENST00000651931|DSPP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.2654296755791	2	521.264196	1040.51384	1.9894	0.001037	-3.4455	-0.001796	-1.4561	-0.00075901	521.2630062643343	79.406	0.43413	79.406	79.175	79.609	0					37	13	4	0	0	0	0.31869	2	33014	33014;33111		38.176	2.1314	1	5460500			1956	3330	969	976	2500;2501	2500					-0.004797416616611372
AVVTHKSRRP	10	Unmodified	_AVVTHKSRRP_					0	0	0			REV__CRKL-LZTR1|1|fusion	REV__CRKL-LZTR1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8445922732353	2	575.843813	1149.67307	1.8258	0.0010514	-0.22419	-0.0001291	1.6016	0.00092228	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.89803	1	30078	30078		1.6526	0	1	2554000	+		1957	8408	970	977	2502	2502					0.10422436476960684
AVVTIAVQL	9	Unmodified	_AVVTIAVQL_					0	0	0			REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	457.2907897830009	2	457.289485	912.564418	2.6652	0.0012188	0.50876	0.00023265	3.1739	0.0014514	457.2897017410468	87.716	0.47717	87.716	87.49	87.967	0					48	15	4	0	0	0	0.01705	1	36665	36665		101.72	7.8386	1	22931000	+		1958	13290	971	978	2503	2503					0.10463832454001931
AVVTIAVQL	9	Unmodified	_AVVTIAVQL_					0	0	0			REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	913.5748779177666	1	913.571694	912.564418	2.6533	0.002424	0.36306	0.00033168	3.0163	0.0027557	913.5717081135787	87.239	0.4258	87.483	87.314	87.74	0.24387					39	14	4	0	0	0	0.0092758	1	36593	36593		108	4.2488	1	13976000	+		1959	13290	971	978	2504	2504					0.10463832454001931
AVVTIAVQL	9	Unmodified	_AVVTIAVQL_					0	0	0			REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	REV__ENST00000471815.5_1_10:14572088-14646275:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	457.289485	912.564418	2.6652	0.0012188	0.50876	0.00023265	3.1739	0.0014514	457.2897017410468	87.716	0.47717	87.716	87.49	87.967	0	0.10089	0.00010988	NaN	101.72	48	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22931000	+		1960	13290	971	978							0.10463832454001931
AVYALLAIGLL	11	Unmodified	_AVYALLAIGLL_					0	0	0			REV__ENST00000483426.5_1_2:106761928-106810697:-|nuORF	REV__ENST00000483426.5_1_2:106761928-106810697:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	559.2232543826103	2	558.854993	1115.69543	1.7585	0.00098273	0.36793	0.00020562	2.1264	0.0011884	558.8547954711682	65.514	0.80866	67.423	66.751	67.559	1.9085					33	25	2	0	0	0	0.14176	1	27318	27318		10.824	1.4408	1	1094800	+		1961	9447	972	979	2505	2505					0.14221223102049407
AVYKQLIV	8	Unmodified	_AVYKQLIV_					0	0	0			REV__ENSG00000086544|ENST00000263370|ITPKC	REV__ENSG00000086544|ENST00000263370|ITPKC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	466.8999511599541	2	467.292028	932.569503	1.7868	0.00083496	-4.0155	-0.0018764	-2.2287	-0.0010414	467.28871286274546	54.801	0.20708	56.206	56.121	56.328	1.4048					9	6	2	0	0	0	2.3239	1	22920	22920		6.3541	0	1	2094800	+		1962	8859	973	980	2506	2506					0.10052136316608085
AVYLVVNGL	9	Unmodified	_AVYLVVNGL_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	947.5569946169853	1	947.556044	946.548768	2.8812	0.0027301	-0.78522	-0.00074404	2.0959	0.001986	947.5552708645916	62.662	0.40664	64.606	64.438	64.845	1.9444					26	12	3	0	0	0	0.10722	1	26324	26324		46.921	6.4723	1	2490900			1963	4283	974	981	2507	2507					0.07335545936962262
AVYRDFSMAL	10	Unmodified	_AVYRDFSMAL_					0	0	0			REV__ENSG00000187918|ENST00000641930|OR51I2	REV__ENSG00000187918|ENST00000641930|OR51I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.7917358279228	2	586.792066	1171.56958	2.9659	0.0017404	-2.3749	-0.0013935	0.59108	0.00034684	586.7898383719938	61.597	0.4016	63.015	62.744	63.145	1.4177					27	12	3	0	0	0	0.60583	1	25851	25851		22.736	3.4793	1	1776900	+		1964	11558	975	982	2508	2508					-0.009342317456912497
AWAEPHFE	8	Unmodified	_AWAEPHFE_					0	0	0		ENST00000375946.8_1_10:27444162-27444405:+|nuORF	ENST00000375946.8_1_10:27444162-27444405:+|nuORF	ENST00000375946.8_1_10:27444162-27444405:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0061218142509	3	329.483737	985.429381	2.153	0.00070937	-3.5011	-0.0011535	-1.3481	-0.00044418	329.4826884594054	72.185	0.3332	73.995	73.772	74.105	1.8101					18	10	2	0	0	0	2.3239	1	30195	30195		1.6526	0.32309	1	591360			1965	6185	976	983	2509	2509					-0.06391647687757995
AWGPPSPEL	9	Unmodified	_AWGPPSPEL_					0	0	0		CTSF|p.V110Pfs*49|1|0.44|ENSG00000174080|chr11:66567647-66567648|-/GATTTTCCTGCCTCAGCCTCCCGAGTAGCTGG|frameshift_variant;ENSG00000174080|ENST00000310325|CTSF	CTSF|p.V110Pfs*49|1|0.44|ENSG00000174080|chr11:66567647-66567648|-/GATTTTCCTGCCTCAGCCTCCCGAGTAGCTGG|frameshift_variant	CTSF|p.V110Pfs*49|1|0.44|ENSG00000174080|chr11:66567647-66567648|-/GATTTTCCTGCCTCAGCCTCCCGAGTAGCTGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	953.4711181521416	1	953.472709	952.465432	0.30077	0.00028678	-0.45795	-0.00043664	-0.15718	-0.00014987	953.4721431712805	53.515	0.23685	54.915	54.821	55.058	1.4005					11	9	2	0	0	0	0.0075027	1	22425	22425		112.59	52.204	1	2537000			1966	385	977	984	2510	2510					-0.01270190510899738
AWKWAGAWWRR	11	Unmodified	_AWKWAGAWWRR_					0	0	0		ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	491.7954284548759	3	491.926545	1472.75781	1.0002	0.00049202	1.5373	0.00075626	2.5375	0.0012483	491.927168320855	31.238	0.38096	33.063	32.834	33.215	1.8246					23	12	3	0	0	0	0.14606	1	13050	13050		1.2148	0.10508	1	1712800			1967	6688	978	985	2511	2511					0.040338070135703674
AWPARKKF	8	Unmodified	_AWPARKKF_					0	0	0			REV__ENST00000480540.1_1_14:59261390-59261744:+|nuORF	REV__ENST00000480540.1_1_14:59261390-59261744:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2940551638603	2	502.295436	1002.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.3	1	106.46	105.96	106.96	0.16174								0	0	0	1.0178	1	45441	45441		0.79363	0	1		+		1968	13349	979	986	2512	2512					0.07513493987846687
AWPDHPWR	8	Unmodified	_AWPDHPWR_					0	0	0		Harlequin-int_dup21|chr1:46331236-46332068:-|1.7847732754456611|0.0357277356843712|5.64|422.0|5|1|sense	Harlequin-int_dup21|chr1:46331236-46332068:-|1.7847732754456611|0.0357277356843712|5.64|422.0|5|1|sense	Harlequin-int_dup21|chr1:46331236-46332068:-|1.7847732754456611|0.0357277356843712|5.64|422.0|5|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0701782107353	3	355.506876	1063.4988	2.9211	0.0010385	2.5188	0.00089544	5.4399	0.0019339	355.5083678006499	60.358	0.22133	62.323	62.26	62.482	1.9653					8	6	2	0	0	0	2.3239	1	25341	25341		0.45834	0.45834	1	325770			1969	7605	980	987	2513	2513					-0.030411439483486902
AWRKKTNHRL	10	Unmodified	_AWRKKTNHRL_					0	0	0		nc|ENSG00000141738|Q14451-2|GRB7;nc|ENSG00000141738|Q14451-4|GRB7;ENSG00000141738|ENST00000309156|GRB7;nc|ENSG00000141738|Q14451-3|GRB7	nc|ENSG00000141738|Q14451-2|GRB7	nc|ENSG00000141738|Q14451-2|GRB7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2558776736259	3	437.258184	1308.75272	1.8237	0.00079744	-2.3808	-0.001041	-0.55704	-0.00024357	437.25680180361326	83.571	1.6615	83.571	82.8	84.461	0					112	53	3	0	0	0	0.89803	1	34684	34684		0.62683	0	1	2658900			1970	2975	981	988	2514	2514					0.11069503150952187
AWWWRPWWSRL	11	Unmodified	_AWWWRPWWSRL_					0	0	0			REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	815.4183837771416	2	815.414937	1628.81532	1.6592	0.0013529	1.7659	0.0014399	3.4251	0.0027928	815.4161879225626	39.699	0.42888	40.012	39.767	40.196	0.31263					38	13	4	0	0	0	1.0395	1	16637	16637		0.30703	0	1	1919300	+		1971	12547	982	989	2515	2515					0.0260664921913758
AWWWRPWWSRL	11	Unmodified	_AWWWRPWWSRL_					0	0	0			REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	815.9164306521416	2	815.414937	1628.81532	0.48606	0.00039634	0.51918	0.00042335	1.0052	0.00081968	815.9165677550567	37.74	0.32727	39.56	39.403	39.73	1.8202					31	10	4	0	0	0	1.0395	1	15849	15849		0.30703	0	1	5705900	+		1972	12547	982	989	2516	2516					0.0260664921913758
AWWWRPWWSRL	11	Unmodified	_AWWWRPWWSRL_					0	0	0			REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	REV__ENST00000355943.7_1_5:110074744-110074849:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	815.414937	1628.81532	1.7189	0.0014016	1.5157	0.0012359	3.2346	0.0026375	815.4156409078607	40.166	0.32066	40.166	39.978	40.299	0	0.077021	-0.00024419	NaN	0.30703	25	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1433100	+		1973	12547	982	989							0.0260664921913758
AYAENIALL	9	Unmodified	_AYAENIALL_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2710449099541	2	489.26875	976.522947	2.9296	0.0014333	0.53209	0.00026033	3.4616	0.0016937	489.2692137530591	60.359	0.39757	61.778	61.566	61.964	1.4196					34	12	4	0	0	0	0.042029	3	25270	25270;25311;25357		74.423	16.951	1	6354600			1974	4939	983	990	2517;2518;2519	2517					0.033746516946507654
AYAENIALL	9	Unmodified	_AYAENIALL_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	977.5381347537041	1	977.530224	976.522947	3.0955	0.003026	3.1727	0.0031014	6.2682	0.0061274	977.5343481390926	60.334	0.3047	61.754	61.566	61.871	1.4196					22	9	3	0	0	0	0.049839	1	25296	25296		68.081	2.8457	1	2354700			1975	4939	983	990	2520	2520					0.033746516946507654
AYAENIALL	9	Unmodified	_AYAENIALL_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2709533572197	2	489.26875	976.522947	3.0415	0.0014881	0.8754	0.00042831	3.9169	0.0019164	489.2694975960687	59.81	0.40018	61.779	61.612	62.012	1.969					30	12	3	0	0	0	0.049839	3	25117	25073;25117;25172		68.081	11.904	1	6562300			1976	4939	983	990	2521;2522;2523	2522					0.033746516946507654
AYAENIALL	9	Unmodified	_AYAENIALL_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	977.530224	976.522947	2.9413	0.0028752	4.8591	0.0047499	7.8003	0.0076251	977.5364575194004	59.84	0.31007	61.809	61.64	61.95	1.969	0.027814	0.00099179	NaN	68.081	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1591100			1977	4939	983	990							0.033746516946507654
AYAIIKEEL	9	Unmodified	_AYAIIKEEL_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2995483279228	2	525.297507	1048.58046	2.384	0.0012523	2.158	0.0011336	4.542	0.0023859	525.2990909097615	40.817	0.31258	42.142	41.96	42.273	1.3254					22	9	3	0	0	0	0.11643	1	17107	17107		43.858	7.7313	1	2095400			1978	3457	984	991	2524	2524					0.05811493900228015
AYAIIKEEL	9	Unmodified	_AYAIIKEEL_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3004638552666	2	525.297507	1048.58046	2.1232	0.0011153	1.7657	0.00092753	3.889	0.0020429	525.298963889933	40.419	0.27929	42.282	42.143	42.422	1.8624					19	8	3	0	0	0	0.073578	1	16939	16939		58.679	28.042	1	2241900			1979	3457	984	991	2525	2525					0.05811493900228015
AYAKFYTLL	9	Unmodified	_AYAKFYTLL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;DENND4C|p.S1184Afs*8|1|0.04|ENSG00000137145|chr9:19346465-19346466|-/GCCA|frameshift_variant;DENND4C|p.S1183Rfs*22|1|0.06|ENSG00000137145|chr9:19346464-19346465|-/GGAGCAGA|frameshift_variant;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3026611208916	2	545.302593	1088.59063	0.73766	0.00040225	-0.37598	-0.00020503	0.36168	0.00019722	545.3030340881178	58.386	0.342	59.804	59.661	60.003	1.4181					25	10	3	0	0	0	0.15635	1	24469	24469		37.974	0	1	3325100			1980	2760	985	992	2526	2526					0.049881016254630595
AYAKFYTLL	9	Unmodified	_AYAKFYTLL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;DENND4C|p.S1184Afs*8|1|0.04|ENSG00000137145|chr9:19346465-19346466|-/GCCA|frameshift_variant;DENND4C|p.S1183Rfs*22|1|0.06|ENSG00000137145|chr9:19346464-19346465|-/GGAGCAGA|frameshift_variant;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8027831912041	2	545.302593	1088.59063	0.49562	0.00027026	-0.25064	-0.00013668	0.24498	0.00013359	545.3030393718359	57.847	0.33469	59.817	59.628	59.962	1.969					19	11	2	0	0	0	0.098163	1	24250	24250		49.933	21.446	1	2324000			1981	2760	985	992	2527	2527					0.049881016254630595
AYALLLQHL	9	Unmodified	_AYALLLQHL_					0	0	0		SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant;SLC26A6|p.L617Gfs*9|1|0.16|ENSG00000225697|chr3:48627993-48627994|-/CACCCCTGACCTCCACCCCTGA|frameshift_variant;nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48670389-48671049:-|nuORF;ENST00000482282.5_1_3:48670520-48671236:-|nuORF	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3098632693291	2	521.30821	1040.60187	3.0824	0.0016069	1.5114	0.00078793	4.5939	0.0023948	521.3080475676375	61.646	0.55488	63.063	62.683	63.238	1.4177					41	17	4	0	0	0	0.033521	3	25846	25798;25846;25885		81.864	41.907	1	7961500			1982	5291	986	993	2528;2529;2530	2529					0.08318923719616578
AYALLLQHL	9	Unmodified	_AYALLLQHL_					0	0	0		SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant;SLC26A6|p.L617Gfs*9|1|0.16|ENSG00000225697|chr3:48627993-48627994|-/CACCCCTGACCTCCACCCCTGA|frameshift_variant;nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000489483.5_1_3:48670389-48671049:-|nuORF;ENST00000482282.5_1_3:48670520-48671236:-|nuORF	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3093749880791	2	521.30821	1040.60187	2.4859	0.0012959	0.75802	0.00039516	3.2439	0.0016911	521.3080931464426	61.086	0.36743	63.051	62.85	63.217	1.9653					27	11	3	0	0	0	0.02596	2	25598	25598;25650		93.883	49.476	1	6754600			1983	5291	986	993	2531;2532	2531					0.08318923719616578
AYALVKRAQ	9	Unmodified	_AYALVKRAQ_					0	0	0			REV__ENST00000515773.5_1_6:43164260-43192180:+|nuORF	REV__ENST00000515773.5_1_6:43164260-43192180:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.7730285525322	2	510.303458	1018.59236	2.9009	0.0014803	0.23893	0.00012193	3.1398	0.0016023	510.30358935388085	73.087	0.31732	74.897	74.797	75.114	1.8101					14	9	2	0	0	0	0.10306	1	30719	30719		13.508	1.8676	1	777840	+		1984	9365	987	994	2533	2533					0.08381155434085485
AYANIISQF	9	Unmodified	_AYANIISQF_					0	0	0		nc|ENSG00000180638|Q86VL8-2|SLC47A2;nc|ENSG00000180638|Q86VL8-5|SLC47A2;ENSG00000180638|ENST00000433844|SLC47A2;nc|ENSG00000180638|Q86VL8-4|SLC47A2;nc|ENSG00000180638|Q86VL8|SLC47A2	nc|ENSG00000180638|Q86VL8-2|SLC47A2	nc|ENSG00000180638|Q86VL8-2|SLC47A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7674438357353	2	513.766374	1025.5182	2.395	0.0012305	-0.036188	-1.8592E-05	2.3588	0.0012119	513.766237721601	63.782	0.34924	65.19	65.019	65.368	1.4071					22	10	3	0	0	0	0.051699	1	26757	26757		67.344	35.038	1	2993300			1985	4551	988	995	2534	2534					0.0064576755189591495
AYANIISQF	9	Unmodified	_AYANIISQF_					0	0	0		nc|ENSG00000180638|Q86VL8-2|SLC47A2;nc|ENSG00000180638|Q86VL8-5|SLC47A2;ENSG00000180638|ENST00000433844|SLC47A2;nc|ENSG00000180638|Q86VL8-4|SLC47A2;nc|ENSG00000180638|Q86VL8|SLC47A2	nc|ENSG00000180638|Q86VL8-2|SLC47A2	nc|ENSG00000180638|Q86VL8-2|SLC47A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7670776247978	2	513.766374	1025.5182	2.6851	0.0013795	-0.1416	-7.275E-05	2.5435	0.0013068	513.7661982042771	63.277	0.31869	65.222	65.058	65.377	1.9444					23	9	3	0	0	0	0.045797	2	26538	26538;26589		71.134	35.007	1	2768800			1986	4551	988	995	2535;2536	2535					0.0064576755189591495
AYARQWRK	8	Unmodified	_AYARQWRK_					0	0	0			REV__CDC42BPB|p.G1113R|1|0.05|ENSG00000198752|chr14:102949877-102949877|C/T|missense_variant	REV__CDC42BPB|p.G1113R|1|0.05|ENSG00000198752|chr14:102949877-102949877|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2022277712822	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.366	1	13.154	12.654	13.654	0.78751								0	0	0	1.0178	1	5132	5132		1.6526	0	1		+		1987	8192	989	996	2537	2537					0.047508068684237514
AYCNTMLLAFR	11	Unmodified	_AYCNTMLLAFR_					0	0	0			REV__nc|ENSG00000169344|P07911-2|UMOD	REV__nc|ENSG00000169344|P07911-2|UMOD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8832275271416	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.822	1	76.604	76.104	77.104	1.7817								0	0	0	0.63775	1	31384	31384		0.45452	0.046251	1		+		1988	10944	990	997	2538	2538					-0.012699271806923207
AYCSGIIQAK	10	Unmodified	_AYCSGIIQAK_					0	0	0			REV__ENSG00000004846|ENST00000404938|ABCB5	REV__ENSG00000004846|ENST00000404938|ABCB5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.8511840701103	3	351.851432	1052.53247	-2.4124	-0.00084881	2.5203	0.00088678	0.10792	3.7971E-05	351.8524395992475	12.505	0.64967	12.505	12.096	12.746	0					41	20	4	0	0	0	0.57775	1	5163	5163		15.739	0	1	5408000	+		1989	8490	991	998	2539	2539					0.008300967085460798
AYDLLLISFAP	11	Unmodified	_AYDLLLISFAP_					0	0	0			REV__ENSG00000267534|ENST00000646641|S1PR2	REV__ENSG00000267534|ENST00000646641|S1PR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8544799685478	2	611.839539	1221.66453	3.0617	0.0018733	-2.0692	-0.001266	0.99249	0.00060725	612.340930415207	85.112	1.4263	86.708	86.064	87.491	1.5962					277	55	7	0	0	0	0.1562	1	35542	35542		45.7	5.251	1	138820000	+		1990	11999	992	999	2540	2540					0.06256024997128407
AYDRTHSL	8	Unmodified	_AYDRTHSL_					0	0	0		ENST00000483224.5_1_3:66354925-66428228:+|nuORF;nc|ENSG00000144741|Q70HW3-2|SLC25A26;ENSG00000144741|ENST00000354883|SLC25A26	ENST00000483224.5_1_3:66354925-66428228:+|nuORF	ENST00000483224.5_1_3:66354925-66428228:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	481.7723266482353	2	481.738148	961.461744	3.6126	0.0017403	-3.4862	-0.0016795	0.12636	6.0872E-05	481.7356261876234	73.821	0.25023	75.139	74.998	75.248	1.318					11	7	2	0	0	0	2.3239	1	30936	30936		10.183	0	1	800760			1991	3092	993	1000	2541	2541					-0.02052860284743474
AYDTVRWEF	9	Unmodified	_AYDTVRWEF_					0	0	0		ENST00000482088.5_1_9:140007335-140007673:-|nuORF;ENST00000460830.1_1_9:140006993-140007673:-|nuORF;ENST00000473532.5_1_9:140005202-140008344:-|nuORF;ENSG00000176978|ENST00000371579|DPP7	ENST00000482088.5_1_9:140007335-140007673:-|nuORF	ENST00000482088.5_1_9:140007335-140007673:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.7808715701103	2	593.780013	1185.54547	1.5517	0.00092137	-0.14978	-8.8937E-05	1.4019	0.00083243	593.7799347983046	54.025	0.50909	55.429	55.198	55.707	1.4048					42	16	3	0	0	0	0.010388	3	22627	22583;22627;22677		107.1	67.15	1	7216500			1992	4426	994	1001	2542;2543;2544	2543					-0.039877489077071004
AYDTVRWEF	9	Unmodified	_AYDTVRWEF_					0	0	0		ENST00000482088.5_1_9:140007335-140007673:-|nuORF;ENST00000460830.1_1_9:140006993-140007673:-|nuORF;ENST00000473532.5_1_9:140005202-140008344:-|nuORF;ENSG00000176978|ENST00000371579|DPP7	ENST00000482088.5_1_9:140007335-140007673:-|nuORF	ENST00000482088.5_1_9:140007335-140007673:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.7798950076103	2	593.780013	1185.54547	0.77554	0.0004605	-0.11087	-6.583E-05	0.66467	0.00039467	593.7798487305537	53.496	0.42517	55.465	55.264	55.69	1.9697					34	13	3	0	0	0	0.019071	3	22425	22382;22425;22465		100.09	60.141	1	8716100			1993	4426	994	1001	2545;2546;2547	2546					-0.039877489077071004
AYDVLFHQW	9	Unmodified	_AYDVLFHQW_					0	0	0		nc|ENSG00000179832|Q8NDA8-6|MROH1;nc|ENSG00000179832|Q8NDA8-5|MROH1;nc|ENSG00000179832|Q8NDA8-4|MROH1;HEATR7A-XRCC5|1|fusion;nc|ENSG00000179832|Q8NDA8-7|MROH1;MROH1|p.R711Gfs*26|1|0.22|ENSG00000179832|chr8:144241470-144241470|A/-|frameshift_variant;MROH1|p.A749Rfs*134|1|0.34|ENSG00000179832|chr8:144242423-144242424|-/GGCACGT|frameshift_variant;nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1	nc|ENSG00000179832|Q8NDA8-6|MROH1	nc|ENSG00000179832|Q8NDA8-6|MROH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.7872802615166	2	589.785099	1177.55564	3.0614	0.0018055	0.58113	0.00034274	3.6425	0.0021483	589.7855775846058	61.371	0.54793	62.789	62.533	63.081	1.4177					30	17	2	0	0	0	0.0044745	1	25742	25742		123.45	87.324	1	11473000			1994	4526	995	1002	2548	2548					-0.026031411824760653
AYDVLFHQW	9	Unmodified	_AYDVLFHQW_					0	0	0		nc|ENSG00000179832|Q8NDA8-6|MROH1;nc|ENSG00000179832|Q8NDA8-5|MROH1;nc|ENSG00000179832|Q8NDA8-4|MROH1;HEATR7A-XRCC5|1|fusion;nc|ENSG00000179832|Q8NDA8-7|MROH1;MROH1|p.R711Gfs*26|1|0.22|ENSG00000179832|chr8:144241470-144241470|A/-|frameshift_variant;MROH1|p.A749Rfs*134|1|0.34|ENSG00000179832|chr8:144242423-144242424|-/GGCACGT|frameshift_variant;nc|ENSG00000179832|Q8NDA8-2|MROH1;ENST00000532255.5_1_8:145218705-145305309:+|nuORF;ENSG00000179832|ENST00000326134|MROH1	nc|ENSG00000179832|Q8NDA8-6|MROH1	nc|ENSG00000179832|Q8NDA8-6|MROH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.7869750857353	2	589.785099	1177.55564	2.9463	0.0017377	0.2216	0.0001307	3.1679	0.0018684	589.7853696181928	60.84	0.39702	62.805	62.607	63.004	1.9653					24	12	2	0	0	0	0.0017491	2	25547	25499;25547		131.27	85.568	1	10844000			1995	4526	995	1002	2549;2550	2550					-0.026031411824760653
AYEIIDQFF	9	Unmodified	_AYEIIDQFF_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.2808715701103	2	573.279315	1144.54408	3.4231	0.0019624	-1.0873	-0.00062331	2.3358	0.0013391	573.2786920705455	86.437	0.25995	87.563	87.487	87.747	1.1265					21	9	3	0	0	0	0.1735	1	36422	36422		36.044	23.513	1	4486400			1996	4789	996	1003	2551	2551					-0.022413829964762044
AYELTQYYF	9	Unmodified	_AYELTQYYF_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	599.3647949099541	2	599.276772	1196.53899	1.8918	0.0011337	-1.0489	-0.00062857	0.84293	0.00050515	599.2761649485132	67.432	0.28068	68.81	68.665	68.946	1.3778					18	8	3	0	0	0	0.11333	1	28244	28244		13.508	0	1	1142600			1997	3736	997	1004	2552	2552					-0.05141686859087713
AYFDVPELI	9	Unmodified	_AYFDVPELI_					0	0	0		nc|ENSG00000115295|Q8N3C7-3|CLIP4;nc|ENSG00000115295|Q8N3C7-2|CLIP4;ENSG00000115295|ENST00000320081|CLIP4;nc|ENSG00000115295|Q8N3C7-4|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7773925662041	2	533.776408	1065.53826	2.2318	0.0011913	0.89329	0.00047682	3.1251	0.0016681	533.7768519412255	84.822	0.45905	85.981	85.782	86.241	1.159					41	14	4	0	0	0	0.087207	3	35607	35559;35607;35661		53.576	30.427	1	16547000			1998	1911	998	1005	2553;2554;2555	2554					0.008115184918551677
AYFDVPELI	9	Unmodified	_AYFDVPELI_					0	0	0		nc|ENSG00000115295|Q8N3C7-3|CLIP4;nc|ENSG00000115295|Q8N3C7-2|CLIP4;ENSG00000115295|ENST00000320081|CLIP4;nc|ENSG00000115295|Q8N3C7-4|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7767822146416	2	533.776408	1065.53826	2.5918	0.0013835	1.1043	0.00058943	3.6961	0.0019729	533.7767552206002	84.364	0.51145	85.96	85.739	86.25	1.5962					34	16	3	0	0	0	0.061246	2	35364	35364;35410		63.563	45.428	1	12619000			1999	1911	998	1005	2556;2557	2556					0.008115184918551677
AYFGYLGII	9	Unmodified	_AYFGYLGII_					0	0	0		tr|A0A553SR08|A0A553SR08_NIACIExopolyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_00090PE=4SV=1	tr|A0A553SR08|A0A553SR08_NIACIExopolyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_00090PE=4SV=1	tr|A0A553SR08|A0A553SR08_NIACIExopolyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_00090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.550280749798	1	1016.54515	1015.53787	2.3474	0.0023863	3.8691	0.0039331	6.2166	0.0063194	1016.5481980227793	75.021	0.31532	76.327	76.12	76.435	1.3063					23	9	3	0	0	0	0.39097	1	31495	31495		20.871	0	1	2156300			2000	16538	999	1006	2558	2558					0.030721435626674065
AYFHMCDRA	9	Unmodified	_AYFHMCDRA_					0	0	0		CASD1|p.Y382H|1|0.28|ENSG00000127995|chr7:94537772-94537772|T/C|missense_variant	CASD1|p.Y382H|1|0.28|ENSG00000127995|chr7:94537772-94537772|T/C|missense_variant	CASD1|p.Y382H|1|0.28|ENSG00000127995|chr7:94537772-94537772|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1016418337822	3	371.825	1112.45317	1.8391	0.00068381	-3.3075	-0.0012298	-1.4685	-0.00054601	371.82373180856433	78.817	0.30973	80.552	80.444	80.753	1.735					19	9	3	0	0	0	0.11938	1	33085	33085		1.1933	0.735	1	851930			2001	119	1000	1007	2559	2559					-0.09855873517267355
AYFNFPELL	9	Unmodified	_AYFNFPELL_					0	0	0		ENSG00000137628|ENST00000393743|DDX60;DDX60|p.L860Qfs*23|1|0.12|ENSG00000137628|chr4:168272134-168272135|-/AACTT|frameshift_variant	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2863036990166	2	557.2844	1112.55425	4.1801	0.0023295	-0.8058	-0.00044906	3.3743	0.0018804	557.2839741957779	93.592	0.41522	94.464	94.258	94.674	0.87176					36	12	4	0	0	0	0.018723	3	39390	39344;39390;39435		100.37	50.438	1	7038400			2002	2779	1001	1008	2560;2561;2562	2561					0.002472247287641949
AYFNFPELL	9	Unmodified	_AYFNFPELL_					0	0	0		ENSG00000137628|ENST00000393743|DDX60;DDX60|p.L860Qfs*23|1|0.12|ENSG00000137628|chr4:168272134-168272135|-/AACTT|frameshift_variant	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2863647341728	2	557.2844	1112.55425	3.2154	0.0017919	0.15402	8.5835E-05	3.3694	0.0018777	557.2845017985703	93.123	0.41338	94.4	94.197	94.61	1.277					38	12	4	0	0	0	0.031324	3	39204	39154;39204;39252		85.357	53.051	1	4574700			2003	2779	1001	1008	2563;2564;2565	2564					0.002472247287641949
AYFPELIANF	10	Unmodified	_AYFPELIANF_					0	0	0		nc|ENSG00000164209|Q96AG3-2|SLC25A46;nc|ENSG00000164209|Q96AG3-3|SLC25A46;ENSG00000164209|ENST00000355943|SLC25A46	nc|ENSG00000164209|Q96AG3-2|SLC25A46	nc|ENSG00000164209|Q96AG3-2|SLC25A46	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8052856326103	2	592.802957	1183.59136	4.1791	0.0024774	0.47943	0.00028421	4.6585	0.0027616	592.802922746375	90.843	0.41719	91.825	91.654	92.071	0.98157					31	12	3	0	0	0	0.052892	3	38302	38250;38302;38358		88.904	52.777	1	2542400			2004	3761	1002	1009	2566;2567;2568	2567					0.006908962745228564
AYFPELIANF	10	Unmodified	_AYFPELIANF_					0	0	0		nc|ENSG00000164209|Q96AG3-2|SLC25A46;nc|ENSG00000164209|Q96AG3-3|SLC25A46;ENSG00000164209|ENST00000355943|SLC25A46	nc|ENSG00000164209|Q96AG3-2|SLC25A46	nc|ENSG00000164209|Q96AG3-2|SLC25A46	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.8022949099541	2	592.802957	1183.59136	3.9717	0.0023544	-0.17229	-0.00010213	3.7994	0.0022523	592.8026578691382	90.491	0.48607	91.857	91.607	92.093	1.366					40	14	4	0	0	0	0.051733	3	38057	38057;38101;38160		92.491	47.513	1	2336400			2005	3761	1002	1009	2569;2570;2571	2569					0.006908962745228564
AYFVDANTL	9	Unmodified	_AYFVDANTL_					0	0	0		tr|A0A553SPE0|A0A553SPE0_NIACIDihydrolipoyldehydrogenaseOS=NialliacirculansOX=1397GN=lpdAPE=3SV=1	tr|A0A553SPE0|A0A553SPE0_NIACIDihydrolipoyldehydrogenaseOS=NialliacirculansOX=1397GN=lpdAPE=3SV=1	tr|A0A553SPE0|A0A553SPE0_NIACIDihydrolipoyldehydrogenaseOS=NialliacirculansOX=1397GN=lpdAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.7909423708916	2	507.250557	1012.48656	2.8173	0.0014291	-2.9546	-0.0014987	-0.13728	-6.9635E-05	507.24939236517594	77.365	0.34955	78.646	78.474	78.823	1.2809					16	10	2	0	0	0	0.097511	1	32537	32537		16.942	2.3606	1	483120			2006	16463	1003	1010	2572	2572					-0.019182252020527812
AYFYPELFR	9	Unmodified	_AYFYPELFR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	603.3043701052666	2	603.303124	1204.5917	2.2111	0.001334	0.045369	2.7371E-05	2.2565	0.0013613	603.3028971931873	64.877	0.47932	64.877	64.624	65.104	0					33	14	3	0	0	0	0.086433	3	27040	26991;27040;27098		53.833	35.686	1	1856700		+	2007	335	1004	1011	2573;2574;2575	2574					-0.002416840056412184
AYFYPELFR	9	Unmodified	_AYFYPELFR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	603.3039428591728	2	603.303124	1204.5917	1.8044	0.0010886	1.8236	0.0011002	3.628	0.0021888	603.3039812409999	64.345	0.32431	64.674	64.497	64.821	0.32899					15	9	2	0	0	0	0.23535	1	26939	26939		29.082	16.039	1	688140		+	2008	335	1004	1011	2576	2576					-0.002416840056412184
AYFYPELFR	9	Unmodified	_AYFYPELFR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	603.303124	1204.5917	2.9441	0.0017762	-0.50586	-0.00030519	2.4382	0.001471	603.3033710503217	63.082	0.15707	64.496	64.439	64.596	1.4134	-0.18617	-0.0011483	NaN	53.833	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329540		+	2009	335	1004	1011							-0.002416840056412184
AYGASFLSF	9	Unmodified	_AYGASFLSF_					0	0	0		ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	962.4639770388603	1	962.46181	961.454533	2.9238	0.002814	-0.50443	-0.0004855	2.4193	0.0023285	962.4601225773106	73.886	0.37618	75.204	74.966	75.342	1.318					25	11	3	0	0	0	0.033521	1	30990	30990		81.864	21.474	1	1649900			2010	3535	1005	1012	2577	2577					-0.02773592885182552
AYGASFLSF	9	Unmodified	_AYGASFLSF_					0	0	0		ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	ENSG00000159596|ENST00000372025|TMEM69	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	962.4637328982353	1	962.46181	961.454533	2.6598	0.00256	-2.0968	-0.0020181	0.56303	0.0005419	962.4599771207008	73.36	0.31171	75.156	74.974	75.286	1.7962					17	9	2	0	0	0	0.061246	2	30754	30754;30805		63.563	13.63	1	1377500			2011	3535	1005	1012	2578;2579	2578					-0.02773592885182552
AYGDIILTF	9	Unmodified	_AYGDIILTF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.537158191204	1	1012.53497	1011.5277	3.0239	0.0030618	-1.4725	-0.0014909	1.5515	0.0015709	1012.5344116854986	81.408	0.43419	82.641	82.502	82.936	1.2332					24	13	2	0	0	0	0.046276	2	34171	34171;34225		70.716	24.695	1	2598000			2012	1345	1006	1013	2580;2581	2580					0.022395358374296848
AYGDIILTF	9	Unmodified	_AYGDIILTF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7721130251884	2	506.771126	1011.5277	3.6834	0.0018667	-0.82957	-0.0004204	2.8539	0.0014463	506.77037308900185	81.442	0.49486	82.675	82.378	82.873	1.2332					33	15	4	0	0	0	0.1735	1	34197	34197		36.044	3.9272	1	2950100			2013	1345	1006	1013	2582	2582					0.022395358374296848
AYGDIILTF	9	Unmodified	_AYGDIILTF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.538378894329	1	1012.53497	1011.5277	2.8091	0.0028444	0.66859	0.00067697	3.4777	0.0035213	1012.5362996952776	81.023	0.31327	82.719	82.578	82.892	1.6959					17	9	2	0	0	0	0.09539	2	34011	33965;34011		50.855	12.29	1	1938800			2014	1345	1006	1013	2583;2584	2584					0.022395358374296848
AYGDIILTF	9	Unmodified	_AYGDIILTF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	506.771126	1011.5277	2.8234	0.0014308	0.17045	8.638E-05	2.9939	0.0015172	506.7707001434077	80.959	0.46596	82.655	82.487	82.953	1.6959	-0.0098681	0.00055087	NaN	36.044	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1736300			2015	1345	1006	1013							0.022395358374296848
AYGEVGRVFF	10	Unmodified	_AYGEVGRVFF_					0	0	0		ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.2863036990166	2	572.792924	1143.57129	1.2856	0.00073636	-2.0823	-0.0011927	-0.79675	-0.00045637	572.7928608682083	52.474	0.49957	54.446	54.078	54.577	1.9722					29	15	2	0	0	0	0.22673	1	21878	21878		45.7	25.246	1	1960300			2016	3135	1007	1014	2585	2585					0.005251453345636037
AYGHFSYEF	9	Unmodified	_AYGHFSYEF_					0	0	0		ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1;ENSG00000073331|ENST00000650871|ALPK1	ENST00000504745.1_1_4:113347516-113362363:+|nuORF	ENST00000504745.1_1_4:113347516-113362363:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7394897341728	2	560.740357	1119.46616	2.1474	0.0012041	-1.1098	-0.00062232	1.0376	0.0005818	560.7394084990166	43.867	0.36683	45.221	45.01	45.377	1.3536					20	11	2	0	0	0	0.10722	2	18371	18371;18418		46.921	35.281	1	1411400			2017	898	1008	1015	2586;2587	2586					-0.08879395861845296
AYGHFSYEF	9	Unmodified	_AYGHFSYEF_					0	0	0		ENST00000504745.1_1_4:113347516-113362363:+|nuORF;nc|ENSG00000073331|Q96QP1-2|ALPK1;ENSG00000073331|ENST00000650871|ALPK1	ENST00000504745.1_1_4:113347516-113362363:+|nuORF	ENST00000504745.1_1_4:113347516-113362363:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7411376833916	2	560.740357	1119.46616	1.9754	0.0011077	-0.25142	-0.00014098	1.724	0.0009667	560.7402573671953	43.256	0.27224	45.2	45.012	45.285	1.9438					19	8	3	0	0	0	0.10722	2	18112	18112;18163		46.921	34.389	1	1552400			2018	898	1008	1015	2588;2589	2588					-0.08879395861845296
AYGLDFYIL	9	Unmodified	_AYGLDFYIL_					0	0	0		ENST00000481453.5_1_16:418974-419244:-|nuORF;ENST00000461550.5_1_16:418974-420218:-|nuORF;ENST00000483764.5_1_16:418974-420218:-|nuORF;chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28;chr16:370225-370362|429|21.26|0.74|4.85|-|ENST00000441883|MRPL28,MRPL28;ENSG00000086504|ENST00000199706|MRPL28	ENST00000481453.5_1_16:418974-419244:-|nuORF	ENST00000481453.5_1_16:418974-419244:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1074.560595691204	1	1074.55062	1073.54335	4.413	0.004742	-0.52769	-0.00056703	3.8853	0.0041749	1074.5488553420657	93.006	0.29465	93.878	93.703	93.998	0.87176					14	8	2	0	0	0	0.078975	2	39118	39118;39155		56.541	18.39	1	2417900			2019	212	1009	1016	2590;2591	2590					0.009518223544773718
AYGLDFYIL	9	Unmodified	_AYGLDFYIL_					0	0	0		ENST00000481453.5_1_16:418974-419244:-|nuORF;ENST00000461550.5_1_16:418974-420218:-|nuORF;ENST00000483764.5_1_16:418974-420218:-|nuORF;chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28;chr16:370225-370362|429|21.26|0.74|4.85|-|ENST00000441883|MRPL28,MRPL28;ENSG00000086504|ENST00000199706|MRPL28	ENST00000481453.5_1_16:418974-419244:-|nuORF	ENST00000481453.5_1_16:418974-419244:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1074.541674792767	1	1074.55062	1073.54335	3.606	0.0038748	-1.8484	-0.0019862	1.7576	0.0018886	1074.5482247968373	92.519	0.35739	93.846	93.666	94.024	1.3269					16	10	2	0	0	0	0.078975	2	38910	38910;38972		56.541	18.39	1	2838100			2020	212	1009	1016	2592;2593	2592					0.009518223544773718
AYGNVFSAF	9	Unmodified	_AYGNVFSAF_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	975.4570800662041	1	975.457059	974.449782	1.8512	0.0018057	-1.0968	-0.0010698	0.75441	0.0007359	975.4552379753756	67.152	0.48987	68.54	68.31	68.8	1.3887					47	15	4	0	0	0	0.006164	3	28160	28113;28160;28212		117.6	43.176	1	14877000			2021	2644	1010	1017	2594;2595;2596	2595					-0.03846477027957462
AYGNVFSAF	9	Unmodified	_AYGNVFSAF_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	975.4556152224541	1	975.457059	974.449782	1.3359	0.0013031	-1.1389	-0.001111	0.19694	0.00019211	975.4551796131631	66.713	0.42302	68.602	68.341	68.764	1.8889					43	13	4	0	0	0	0.0037165	3	28030	27928;27976;28030		125.62	51.202	1	13948000			2022	2644	1010	1017	2597;2598;2599	2599					-0.03846477027957462
AYGNVFSAF	9	Unmodified	_AYGNVFSAF_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2338134646416	2	488.232168	974.449782	1.5087	0.00073658	3.6514	0.0017828	5.1601	0.0025193	488.23318883479436	66.662	0.3911	68.551	68.373	68.764	1.8889					31	12	3	0	0	0	0.0075027	2	27998	27929;27998		112.59	48.357	1	4385800			2023	2644	1010	1017	2600;2601	2601					-0.03846477027957462
AYGNVFSAF	9	Unmodified	_AYGNVFSAF_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	488.232168	974.449782	1.8828	0.00091925	2.212	0.00108	4.0948	0.0019992	488.2326481044167	67.184	0.35968	68.573	68.376	68.735	1.3888	0.010703	-0.00086479	NaN	112.59	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6762600			2024	2644	1010	1017							-0.03846477027957462
AYGPVIVIYL	10	Unmodified	_AYGPVIVIYL_					0	0	0		nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	nc|ENSG00000186268|Q8NGN7|OR10D4P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	553.8289062380791	2	554.326068	1106.63758	1.7945	0.00099476	1.7406	0.00096483	3.5351	0.0019596	554.3279738326091	70.418	0.46695	72.256	71.914	72.381	1.8378					20	14	2	0	0	0	0.12513	1	29579	29579		0.45834	0.057624	1	1349000			2025	7949	1011	1018	2602	2602					0.0885296117658072
AYGSLFNTI	9	Unmodified	_AYGSLFNTI_					0	0	0		nc|ENSG00000137944|Q6YP21-2|KYAT3;ENST00000446900.6_1_1:89430347-89454033:-|nuORF;nc|ENSG00000137944|Q6YP21-3|KYAT3;ENSG00000137944|ENST00000260508|KYAT3	nc|ENSG00000137944|Q6YP21-2|KYAT3	nc|ENSG00000137944|Q6YP21-2|KYAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	985.5010864138603	1	985.498923	984.491647	4.0699	0.0040109	-1.0053	-0.00099075	3.0646	0.0030202	985.497506440916	65.061	0.56413	66.46	66.285	66.849	1.3989					41	17	4	0	0	0	5.2553E-05	2	27266	27266;27314		149.99	57.503	1	10415000			2026	2802	1012	1019	2603;2604	2603					-0.0012192133942789951
AYGSLFNTI	9	Unmodified	_AYGSLFNTI_					0	0	0		nc|ENSG00000137944|Q6YP21-2|KYAT3;ENST00000446900.6_1_1:89430347-89454033:-|nuORF;nc|ENSG00000137944|Q6YP21-3|KYAT3;ENSG00000137944|ENST00000260508|KYAT3	nc|ENSG00000137944|Q6YP21-2|KYAT3	nc|ENSG00000137944|Q6YP21-2|KYAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	985.5033447146416	1	985.498923	984.491647	2.331	0.0022972	-0.24614	-0.00024257	2.0848	0.0020546	985.4986744071497	64.596	0.63179	66.524	66.325	66.957	1.928					38	19	4	0	0	0	0.00090036	3	27057	27057;27104;27150		133.7	49.318	1	5706500			2027	2802	1012	1019	2605;2606;2607	2605					-0.0012192133942789951
AYGSNFGMS	9	Unmodified	_AYGSNFGMS_					0	0	0			REV__ENST00000493581.1_1_9:33442297-33442579:-|nuORF	REV__ENST00000493581.1_1_9:33442297-33442579:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	467.1953002810478	2	467.192185	932.369817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.915	1	31.205	30.705	31.705	0.29086								0	0	0	0.42693	1	12970	12970		2.0598	1.2661	1		+		2028	10773	1013	1020	2608	2608					-0.09907286693442074
AYGWVSATF	9	Unmodified	_AYGWVSATF_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;C9orf3-HIATL1|3|fusion;C9orf3-HIATL1|4|fusion;nc|ENSG00000148110|Q5SR56-2|MFSD14B;ENSG00000148110|ENST00000375344|MFSD14B	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1001.475817859173	1	1001.47271	1000.46543	3.651	0.0036564	-1.568	-0.0015703	2.083	0.0020861	1001.4720186827556	65.248	0.31325	66.647	66.443	66.757	1.3989					15	9	2	0	0	0	0.10722	1	27374	27374		46.921	27.482	1	1398500			2029	110	1014	1021	2609	2609					-0.03478190510918466
AYGWVSATF	9	Unmodified	_AYGWVSATF_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;C9orf3-HIATL1|3|fusion;C9orf3-HIATL1|4|fusion;nc|ENSG00000148110|Q5SR56-2|MFSD14B;ENSG00000148110|ENST00000375344|MFSD14B	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1001.474475085735	1	1001.47271	1000.46543	2.1946	0.0021978	-1.3899	-0.0013919	0.80471	0.0008059	1001.4720254481982	64.765	0.34677	66.693	66.487	66.834	1.928					19	10	2	0	0	0	0.20838	1	27179	27179		32.117	18.609	1	1106000			2030	110	1014	1021	2610	2610					-0.03478190510918466
AYIAVGSISF	10	Unmodified	_AYIAVGSISF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1027.548999011517	1	1027.54587	1026.5386	2.8455	0.0029239	3.8207	0.0039259	6.6662	0.0068498	1027.5490731384475	73.027	0.75533	74.357	74.004	74.76	1.3298					37	23	3	0	0	0	0.3543	1	30661	30661		36.044	3.2585	1	1697600			2031	1792	1015	1022	2611	2611					0.026389382117031346
AYIAVGSISF	10	Unmodified	_AYIAVGSISF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2776977419853	2	514.276575	1026.5386	3.7362	0.0019214	-1.3449	-0.00069165	2.3913	0.0012298	514.2755646565198	73.097	0.6612	74.427	74.004	74.665	1.3297					37	20	2	0	0	0	0.59682	1	30678	30678		23.148	1.4018	1	2704700			2032	1792	1015	1022	2612	2612					0.026389382117031346
AYIAVGSISF	10	Unmodified	_AYIAVGSISF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2783691287041	2	514.276575	1026.5386	2.9998	0.0015427	-1.419	-0.00072973	1.5808	0.00081299	514.2759401395449	72.527	0.68402	74.337	73.89	74.574	1.8101					37	21	2	0	0	0	0.48057	2	30425	30425;30478		28.487	8.0332	1	2624300			2033	1792	1015	1022	2613;2614	2613					0.026389382117031346
AYIAVGSISF	10	Unmodified	_AYIAVGSISF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1027.545947253704	1	1027.54587	1026.5386	3.0617	0.0031461	-0.82661	-0.00084938	2.2351	0.0022967	1027.5443172354721	72.59	0.28166	74.4	74.198	74.48	1.8101					13	8	2	0	0	0	0.3543	1	30455	30455		36.044	8.4154	1	1160600			2034	1792	1015	1022	2615	2615					0.026389382117031346
AYIDYLSHL	9	Unmodified	_AYIDYLSHL_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.7804443240166	2	547.779482	1093.54441	2.6651	0.0014599	0.85924	0.00047068	3.5244	0.0019306	547.7801734137518	61.9	0.4435	63.318	63.081	63.524	1.4177					22	13	2	0	0	0	0.03795	1	25914	25914		77.984	41.857	1	3857000			2035	4394	1016	1023	2616	2616					0.0013803672338781325
AYIDYLSHL	9	Unmodified	_AYIDYLSHL_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.7810546755791	2	547.779482	1093.54441	2.1297	0.0011666	0.047736	2.6149E-05	2.1774	0.0011928	547.7807310539833	61.345	0.53824	63.302	63.119	63.657	1.9571					46	16	5	0	0	0	0.03795	1	25705	25705		77.984	40.01	1	4668600			2036	4394	1016	1023	2617	2617					0.0013803672338781325
AYIERMNYI	9	Unmodified	_AYIERMNYI_					0	0	0		ENST00000471959.2_1_6:111995672-112015899:-|nuORF;nc|ENSG00000010810|P06241-3|FYN;nc|ENSG00000010810|P06241-2|FYN;ENSG00000010810|ENST00000354650|FYN;ENSG00000176105|ENST00000314574|YES1	ENST00000471959.2_1_6:111995672-112015899:-|nuORF	ENST00000471959.2_1_6:111995672-112015899:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.7925292849541	2	586.792066	1171.56958	2.3255	0.0013646	-0.54652	-0.00032069	1.7789	0.0010439	586.792378229927	39.882	0.18317	41.192	41.086	41.269	1.3102					13	5	3	0	0	0	0.086433	1	16714	16714		53.833	15.859	1	2142100			2037	558	1017	1024	2618	2618					-0.009342317456912497
AYIKGGWIL	9	Unmodified	_AYIKGGWIL_					0	0	0		nc|ENSG00000168234|Q8N584-2|TTC39C;ENSG00000168234|ENST00000317571|TTC39C	nc|ENSG00000168234|Q8N584-2|TTC39C	nc|ENSG00000168234|Q8N584-2|TTC39C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8014099001884	2	510.797478	1019.5804	2.2441	0.0011463	0.83003	0.00042397	3.0741	0.0015703	510.79834677888203	56.892	0.30899	58.307	58.153	58.462	1.4145					24	9	3	0	0	0	0.10294	2	23806	23806;23857		48.346	22.005	1	3741200			2038	4021	1018	1025	2619;2620	2619					0.07139538690910285
AYIKGGWIL	9	Unmodified	_AYIKGGWIL_					0	0	0		nc|ENSG00000168234|Q8N584-2|TTC39C;ENSG00000168234|ENST00000317571|TTC39C	nc|ENSG00000168234|Q8N584-2|TTC39C	nc|ENSG00000168234|Q8N584-2|TTC39C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8021423220634	2	510.797478	1019.5804	1.4297	0.0007303	2.3603	0.0012056	3.79	0.0019359	510.79900692791483	56.288	0.36909	58.257	58.087	58.456	1.9684					28	11	3	0	0	0	0.076627	2	23590	23590;23637		57.471	16.753	1	4212700			2039	4021	1018	1025	2621;2622	2621					0.07139538690910285
AYKLRMRF	8	Unmodified	_AYKLRMRF_					0	0	0		ENST00000433419.2_3_17:20268846-20268972:+|nuORF	ENST00000433419.2_3_17:20268846-20268972:+|nuORF	ENST00000433419.2_3_17:20268846-20268972:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.3107177615166	2	542.807854	1083.60115	2.2666	0.0012303	1.3834	0.0007509	3.65	0.0019812	542.807628256738	61.46	0.53444	63.417	63.028	63.562	1.9571					23	16	2	0	0	0	2.3239	1	25807	25807		2.5775	0	1	2956800			2040	6512	1019	1026	2623	2623					0.06269805798910966
AYKPPGFSL	9	Unmodified	_AYKPPGFSL_					0	0	0		ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF;NUP205|p.A873*|1|0.07|ENSG00000155561|chr7:135602906-135602909|CTGG/-|frameshift_variant	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2672607302666	2	490.26601	978.517468	1.6464	0.00080717	0.13785	6.7584E-05	1.7842	0.00087475	490.26677888767296	42.987	0.31332	44.327	44.202	44.515	1.3399					15	9	2	0	0	0	0.35546	1	18022	18022		30.637	11.198	1	800870			2041	3423	1020	1027	2624	2624					0.027349729028628644
AYKPPGFSL	9	Unmodified	_AYKPPGFSL_					0	0	0		ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF;NUP205|p.A873*|1|0.07|ENSG00000155561|chr7:135602906-135602909|CTGG/-|frameshift_variant	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2660400271416	2	490.26601	978.517468	1.8268	0.00089564	-1.2904	-0.00063266	0.53639	0.00026297	490.2657419925896	42.445	0.34435	44.366	44.165	44.509	1.9211					20	10	3	0	0	0	0.18337	1	17786	17786		46.021	13.904	1	574220			2042	3423	1020	1027	2625	2625					0.027349729028628644
AYKWKETL	8	Unmodified	_AYKWKETL_					0	0	0		CON__Q3T052;ENST00000468472.1_1_3:52847439-52852236:-|nuORF;nc|ENSG00000055955|Q14624-4|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-2|ITIH4;ENSG00000055955|ENST00000266041|ITIH4	CON__Q3T052	CON__Q3T052	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1379882693291	2	519.784567	1037.55458	1.2933	0.00067223	-0.87579	-0.00045522	0.41749	0.000217	519.7845474783999	70.605	0.15173	72.443	72.381	72.532	1.8378					8	4	2	0	0	0	2.3239	1	29595	29595		10.183	3.9776	1	534850		+	2043	359	1021	1028	2626	2626					0.037306444486148393
AYKWKETL	8	Unmodified	_AYKWKETL_					0	0	0		CON__Q3T052;ENST00000468472.1_1_3:52847439-52852236:-|nuORF;nc|ENSG00000055955|Q14624-4|ITIH4;nc|ENSG00000055955|Q14624-3|ITIH4;nc|ENSG00000055955|Q14624-2|ITIH4;ENSG00000055955|ENST00000266041|ITIH4	CON__Q3T052	CON__Q3T052	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	519.784567	1037.55458	2.6674	0.0013865	-2.5431	-0.0013219	0.12429	6.4605E-05	519.7835915661925	71.147	0.14833	72.488	72.392	72.541	1.3415	0.022736	-0.00076878	NaN	10.183	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	501540		+	2044	359	1021	1028							0.037306444486148393
AYKYIQELW	9	Unmodified	_AYKYIQELW_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3169433474541	2	607.316232	1212.61791	1.8458	0.001121	-0.95198	-0.00057815	0.89384	0.00054285	607.3155003434682	56.897	0.54417	58.311	58.093	58.637	1.4145					44	17	4	0	0	0	0.014446	3	23843	23792;23843;23895		114.65	63.019	1	14197000			2045	4340	1022	1029	2627;2628;2629	2628					0.020105851658399843
AYKYIQELW	9	Unmodified	_AYKYIQELW_					0	0	0		nc|ENSG00000174748|P61313-2|RPL15;ENSG00000174748|ENST00000307839|RPL15	nc|ENSG00000174748|P61313-2|RPL15	nc|ENSG00000174748|P61313-2|RPL15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.3163940310478	2	607.316232	1212.61791	1.0645	0.00064648	-0.35683	-0.00021671	0.70766	0.00042977	607.3158959403289	56.345	0.42833	58.314	58.117	58.545	1.9684					41	13	4	0	0	0	0.039278	3	23634	23589;23634;23677		85.272	31.131	1	12909000			2046	4340	1022	1029	2630;2631;2632	2631					0.020105851658399843
AYLEAHETF	9	Unmodified	_AYLEAHETF_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7555419802666	2	540.753464	1079.49238	0.8346	0.00045131	2.6753	0.0014467	3.5099	0.001898	540.7552336609444	30.681	0.27839	31.963	31.843	32.121	1.2825					13	8	2	0	0	0	0.24063	1	12881	12881		28.487	5.7506	1	379350			2047	1742	1023	1030	2633	2633					-0.0441912669039084
AYLEAHETF	9	Unmodified	_AYLEAHETF_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	540.753464	1079.49238	0.8943	0.00048359	2.2426	0.0012127	3.1369	0.0016963	540.7543896651097	30.232	0.18471	32.047	31.923	32.108	1.8151	0.041689	-0.00026421	NaN	28.487	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587740			2048	1742	1023	1030							-0.0441912669039084
AYLEAIHNF	9	Unmodified	_AYLEAIHNF_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2732421755791	2	539.271824	1076.5291	2.6273	0.0014168	0.70048	0.00037775	3.3278	0.0017946	539.2721346000651	45.083	0.41847	46.449	46.242	46.66	1.3653					44	12	4	0	0	0	0.023685	3	18895	18848;18895;18934		108	64.327	1	17359000			2049	665	1024	1031	2634;2635;2636	2635					-0.006108300738333128
AYLEAIHNF	9	Unmodified	_AYLEAIHNF_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2727538943291	2	539.271824	1076.5291	2.208	0.0011907	0.4527	0.00024413	2.6607	0.0014348	539.2720332037665	44.507	0.47945	46.467	46.223	46.703	1.9596					43	14	4	0	0	0	0.028318	3	18644	18607;18644;18682		111.29	68.04	1	11382000			2050	665	1024	1031	2637;2638;2639	2638					-0.006108300738333128
AYLESFYKF	9	Unmodified	_AYLESFYKF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2907592654228	2	584.289682	1166.56481	2.4503	0.0014317	-0.65496	-0.00038269	1.7953	0.001049	584.2896840502616	59.566	0.71149	60.986	60.587	61.298	1.4196					70	22	5	0	0	0	0.024001	4	25012	24926;24973;25012;25053		96.111	34.509	1	27760000			2051	3540	1025	1032	2640;2641;2642;2643	2642					-0.011807926168103222
AYLESFYKF	9	Unmodified	_AYLESFYKF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2911254763603	2	584.289682	1166.56481	2.4729	0.0014449	-0.041282	-2.4121E-05	2.4316	0.0014208	584.289905234564	59.098	0.65202	61.067	60.663	61.315	1.969					65	20	5	0	0	0	0.010279	4	24828	24747;24790;24828;24871		107.19	36.855	1	28764000			2052	3540	1025	1032	2644;2645;2646;2647	2646					-0.011807926168103222
AYLGKMWVF	9	Oxidation (M)	_AYLGKM(Oxidation (M))WVF_		AYLGKM(1)WVF		AYLGKM(51)WVF	0	0	1		ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7898437380791	2	565.788795	1129.56304	0.36645	0.00020733	-0.045953	-2.6E-05	0.3205	0.00018133	565.7888253284775	56.047	0.28696	57.457	57.366	57.653	1.4099					19	14	2	0	0	0	0.09539	1	23518	23518		50.855	23.971	1	3385400			2053	5141	1026	1033	2648	2648		91			0.0034387509356292867
AYLGKMWVF	9	Oxidation (M)	_AYLGKM(Oxidation (M))WVF_		AYLGKM(1)WVF		AYLGKM(42)WVF	0	0	1		ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7878295779228	2	565.788795	1129.56304	0.52327	0.00029606	-0.63358	-0.00035847	-0.11031	-6.2413E-05	565.788417310544	55.522	0.28985	57.491	57.4	57.69	1.9684					18	14	2	0	0	0	0.12174	1	23340	23340		42.095	15.211	1	5365000			2054	5141	1026	1033	2649	2649		91			0.0034387509356292867
AYLGKMWVF	9	Unmodified	_AYLGKMWVF_					0	0	0		ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7931396365166	2	557.791338	1113.56812	1.9998	0.0011155	1.1564	0.00064502	3.1562	0.0017605	557.7919074972069	69.061	0.73468	70.427	69.966	70.701	1.3657					72	23	5	0	0	0	0.042029	3	28908	28908;28952;29004		74.423	50.402	1	22066000			2055	5141	1026	1034	2650;2651;2652	2650					0.01588178956194497
AYLGKMWVF	9	Unmodified	_AYLGKMWVF_					0	0	0		ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	ENSG00000204421|ENST00000375819|LY6G6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7920410037041	2	557.791338	1113.56812	1.9147	0.001068	1.1772	0.00065661	3.0919	0.0017246	557.7919481165588	68.384	0.65487	70.254	69.979	70.634	1.87					70	20	5	0	0	0	0.042029	3	28642	28642;28689;28728		74.423	56.276	1	16620000			2056	5141	1026	1034	2653;2654;2655	2653					0.01588178956194497
AYLIDIKTI	9	Unmodified	_AYLIDIKTI_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3169433474541	2	525.3157	1048.61685	2.5431	0.0013359	-0.23775	-0.00012489	2.3053	0.001211	525.3156750298485	59.523	0.37699	60.942	60.738	61.115	1.4196					32	11	4	0	0	0	0.029061	2	24950	24950;25005		88.954	19.849	1	5414300			2057	2806	1027	1035	2656;2657	2656					0.09448370796940253
AYLIDIKTI	9	Unmodified	_AYLIDIKTI_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3166381716728	2	525.3157	1048.61685	2.5326	0.0013304	-0.6265	-0.00032911	1.9062	0.0010013	525.3151599999758	59.052	0.46835	61.021	60.694	61.162	1.969					31	14	3	0	0	0	0.026734	2	24763	24763;24805		92.653	19.685	1	5005600			2058	2806	1027	1035	2658;2659	2658					0.09448370796940253
AYLKAIVLF	9	Unmodified	_AYLKAIVLF_					0	0	0		ENST00000552484.1_1_12:95422157-95422295:-|nuORF;ENST00000547594.5_1_12:95420624-95451409:-|nuORF;ENSG00000120798|ENST00000333003|NR2C1;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;ENSG00000177463|ENST00000425241|NR2C2;nc|ENSG00000177463|P49116-2|NR2C2	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3240234255791	2	519.323328	1036.6321	2.6453	0.0013738	0.25781	0.00013389	2.9032	0.0015077	519.3235262481122	69.679	0.87272	71.045	70.787	71.66	1.3657					73	27	4	0	0	0	0.083604	3	29206	29206;29250;29289		54.774	16.622	1	19223000			2059	2117	1028	1036	2660;2661;2662	2660					0.11525282384764068
AYLKAIVLF	9	Unmodified	_AYLKAIVLF_					0	0	0		ENST00000552484.1_1_12:95422157-95422295:-|nuORF;ENST00000547594.5_1_12:95420624-95451409:-|nuORF;ENSG00000120798|ENST00000333003|NR2C1;ENST00000475707.5_1_3:15045421-15079667:+|nuORF;ENSG00000177463|ENST00000425241|NR2C2;nc|ENSG00000177463|P49116-2|NR2C2	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3226806521416	2	519.323328	1036.6321	1.5217	0.00079024	0.57049	0.00029627	2.0922	0.0010865	519.3236246960026	69.141	0.9303	70.994	70.709	71.639	1.853					77	29	4	0	0	0	0.083604	4	28946	28946;28991;29041;29084		54.774	21.988	1	16851000			2060	2117	1028	1036	2663;2664;2665;2666	2663					0.11525282384764068
AYLKWISQI	9	Unmodified	_AYLKWISQI_					0	0	0		RINT1|p.V252*|1|0.15|ENSG00000135249|chr7:105547246-105547252|CTGTTGG/-|frameshift_variant;ENSG00000135249|ENST00000257700|RINT1	RINT1|p.V252*|1|0.15|ENSG00000135249|chr7:105547246-105547252|CTGTTGG/-|frameshift_variant	RINT1|p.V252*|1|0.15|ENSG00000135249|chr7:105547246-105547252|CTGTTGG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3229858279228	2	561.321317	1120.62808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.762	1	64.175	63.675	64.675	1.4134								0	0	0	0.043707	1	26323	26323		49.933	24.534	1				2061	2653	1029	1037	2667	2667					0.07259192891092425
AYLLNLNHL	9	Unmodified	_AYLLNLNHL_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8040649294853	2	535.803291	1069.59203	2.012	0.0010781	-1.0979	-0.00058826	0.91414	0.0004898	535.8026505779192	58.917	0.45564	60.337	60.1	60.556	1.4196					44	14	4	0	0	0	0.028763	3	24732	24640;24687;24732		89.427	45.02	1	39283000			2062	820	1030	1038	2668;2669;2670	2670					0.06001735714221468
AYLLNLNHL	9	Unmodified	_AYLLNLNHL_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8051635622978	2	535.803291	1069.59203	1.7036	0.00091282	-0.1882	-0.00010084	1.5154	0.00081198	535.8031642478319	58.36	0.48962	60.329	60.084	60.574	1.969					45	15	4	0	0	0	0.033521	3	24428	24428;24465;24508		81.864	37.457	1	36776000			2063	820	1030	1038	2671;2672;2673	2671					0.06001735714221468
AYLLTLGKF	9	Unmodified	_AYLLTLGKF_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2	nc|ENSG00000055163|Q96F07|CYFIP2	nc|ENSG00000055163|Q96F07|CYFIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.3107177615166	2	513.305136	1024.59572	2.8763	0.0014764	4.388	0.0022524	7.2644	0.0037288	513.3073726125486	63.36	0.3406	64.773	64.566	64.906	1.4134					21	10	3	0	0	0	0.04145	1	26565	26565		74.929	0	1	2293600			2064	719	1031	1039	2674	2674					0.08440405488067881
AYLLTLGKF	9	Unmodified	_AYLLTLGKF_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2	nc|ENSG00000055163|Q96F07|CYFIP2	nc|ENSG00000055163|Q96F07|CYFIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.3119994997978	2	513.305136	1024.59572	2.9085	0.001493	4.1057	0.0021075	7.0142	0.0036004	513.3075087547752	62.749	0.31225	64.693	64.532	64.845	1.9444					20	9	3	0	0	0	0.079895	2	26326	26326;26383		56.177	0	1	1980800			2065	719	1031	1039	2675;2676	2675					0.08440405488067881
AYLNLISQL	9	Unmodified	_AYLNLISQL_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.593432605267	1	1034.58807	1033.5808	2.0882	0.0021604	-0.68092	-0.00070447	1.4073	0.0014559	1034.587456971755	79.43	0.18661	80.681	80.52	80.707	1.2512					6	5	2	0	0	0	0.13873	1	33343	33343		39.957	5.8549	1	731660			2066	1054	1032	1040	2677	2677					0.06534913620112093
AYLNLISQL	9	Unmodified	_AYLNLISQL_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1034.594287097454	1	1034.58807	1033.5808	2.8452	0.0029436	1.4098	0.0014586	4.255	0.0044022	1034.5915015602052	78.91	0.15401	80.645	80.537	80.691	1.735					5	4	2	0	0	0	0.22519	1	33105	33105		30.225	0	1	647520			2067	1054	1032	1040	2678	2678					0.06534913620112093
AYLNLISQL	9	Unmodified	_AYLNLISQL_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7991821169853	2	517.797675	1033.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.868	1	80.603	80.103	81.103	1.735								0	0	0	0.04443	1	33077	33077		50.855	12.881	1				2068	1054	1032	1040	2679	2679					0.06534913620112093
AYLPEWKENI	10	Unmodified	_AYLPEWKENI_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.8257324099541	2	631.824421	1261.63429	2.3698	0.0014973	-1.0896	-0.00068844	1.2802	0.00080885	631.8237650192873	50.085	0.38269	51.476	51.324	51.706	1.3911					28	11	3	0	0	0	0.10014	2	20994	20944;20994		63.961	24.011	1	2570900			2069	5052	1033	1041	2680;2681	2681					0.01393666331955501
AYLPEWKENI	10	Unmodified	_AYLPEWKENI_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.8238403201103	2	631.824421	1261.63429	1.2306	0.00077749	0.23001	0.00014533	1.4606	0.00092282	632.3260413695668	49.544	0.34761	51.522	51.318	51.665	1.9772					26	10	3	0	0	0	0.1353	2	20771	20720;20771		57.722	24.936	1	2465400			2070	5052	1033	1041	2682;2683	2683					0.01393666331955501
AYLPHTFWI	9	Unmodified	_AYLPHTFWI_					0	0	0		nc|ENSG00000145246|Q9P241-2|ATP10D;ENSG00000145246|ENST00000273859|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3022949099541	2	574.300384	1146.58622	2.8861	0.0016575	-0.23187	-0.00013316	2.6543	0.0015243	574.3000518248818	70.327	0.28629	71.681	71.521	71.807	1.3536					13	8	2	0	0	0	0.11478	1	29520	29520		44.407	20.386	1	545430			2071	3105	1034	1042	2684	2684					0.018786372025488163
AYLPHTFWI	9	Unmodified	_AYLPHTFWI_					0	0	0		nc|ENSG00000145246|Q9P241-2|ATP10D;ENSG00000145246|ENST00000273859|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	nc|ENSG00000145246|Q9P241-2|ATP10D	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	574.300384	1146.58622	2.8864	0.0016577	-0.31765	-0.00018243	2.5688	0.0014752	574.2997414431658	69.807	0.25049	71.645	71.468	71.719	1.8378	-0.018035	-5.1072E-05	NaN	44.407	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818220			2072	3105	1034	1042							0.018786372025488163
AYLPKILQI	9	Unmodified	_AYLPKILQI_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8359863162041	2	529.83406	1057.65357	1.981	0.0010496	-1.0084	-0.00053431	0.97252	0.00051527	529.8351399469014	66.366	0.52119	67.755	67.536	68.057	1.3887					38	16	4	0	0	0	0.033794	2	27828	27828;27880		81.613	0	1	4401200			2073	2118	1035	1043	2685;2686	2685					0.12704667413527204
AYLPKILQI	9	Unmodified	_AYLPKILQI_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8360473513603	2	529.83406	1057.65357	1.9349	0.0010252	-2.1882	-0.0011594	-0.25326	-0.00013419	529.8348300064833	65.896	0.48485	67.804	67.529	68.014	1.9085					37	15	3	0	0	0	0.033794	2	27656	27607;27656		81.613	0	1	3550000			2074	2118	1035	1043	2687;2688	2688					0.12704667413527204
AYLPPLQQVF	10	Unmodified	_AYLPPLQQVF_					0	0	0		AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant;ENSG00000092847|ENST00000373204|AGO1	AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant	AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3295776247978	2	588.326599	1174.63865	2.7738	0.0016319	1.1874	0.00069859	3.9612	0.0023305	588.3280641833995	79.468	0.59178	80.719	80.456	81.048	1.2512					33	18	4	0	0	0	0.052125	2	33367	33314;33367		77.984	45.597	1	2227900			2075	27	1036	1044	2689;2690	2690					0.05831175545495171
AYLPPLQQVF	10	Unmodified	_AYLPPLQQVF_					0	0	0		AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant;ENSG00000092847|ENST00000373204|AGO1	AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant	AGO1|p.F742Lfs*2|1|0.08|ENSG00000092847|chr1:35918381-35918382|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3307983279228	2	588.326599	1174.63865	2.0164	0.0011863	3.7261	0.0021921	5.7424	0.0033784	588.3286379762792	79.034	0.55763	80.769	80.506	81.064	1.735					33	17	3	0	0	0	0.081078	2	33157	33104;33157		67.344	38.262	1	2210500			2076	27	1036	1044	2691;2692	2692					0.05831175545495171
AYLPVNESF	9	Unmodified	_AYLPVNESF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion;chr19:3976537-3977215|142|66.23|0.66|6.64|-|2|None,EEF2|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2585937380791	2	520.258382	1038.50221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.503	1	56.913	56.413	57.413	1.4099								0	0	0	0.040688	1	23252	23252		65.235	12.967	1				2077	3983	1037	1045	2693	2693					-0.015499386850024166
AYLPVNESF	9	Unmodified	_AYLPVNESF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion;chr19:3976537-3977215|142|66.23|0.66|6.64|-|2|None,EEF2|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2590209841728	2	520.258382	1038.50221	0.25243	0.00013133	1.3289	0.00069139	1.5814	0.00082272	520.2588432565863	55.122	0.31865	57.091	56.9	57.219	1.9684					23	13	3	0	0	0	0.091139	2	23076	23076;23127		52.268	14.294	1	8013300			2078	3983	1037	1045	2694;2695	2694					-0.015499386850024166
AYLPVNESF	9	Unmodified	_AYLPVNESF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion;chr19:3976537-3977215|142|66.23|0.66|6.64|-|2|None,EEF2|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1039.513354480267	1	1039.50949	1038.50221	1.208	0.0012557	-0.67622	-0.00070294	0.53173	0.00055274	1039.510092388585	55.171	0.24937	57.139	56.93	57.179	1.9684					14	9	2	0	0	0	0.0021793	1	23141	23141		88.904	13.975	1	5897800			2079	3983	1037	1045	2696	2696					-0.015499386850024166
AYLPVNESF	9	Unmodified	_AYLPVNESF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion;chr19:3976537-3977215|142|66.23|0.66|6.64|-|2|None,EEF2|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1039.50949	1038.50221	0.47311	0.0004918	-4.1244	-0.0042874	-3.6513	-0.0037956	1039.5061222411427	55.595	0.30765	57.005	56.793	57.1	1.4099	-0.067167	-0.0015623	NaN	88.904	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4300100			2080	3983	1037	1045							-0.015499386850024166
AYLPVNESFGF	11	Unmodified	_AYLPVNESFGF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3061401247978	2	622.303321	1242.59209	2.1477	0.0013365	0.87908	0.00054705	3.0268	0.0018836	622.3038975242158	75.66	0.40037	76.966	76.83	77.231	1.3063					29	12	3	0	0	0	0.20118	2	31770	31770;31821		39.95	24.103	1	1915600			2081	3983	1038	1046	2697;2698	2697					-0.01950309076460144
AYLPVNESFGF	11	Unmodified	_AYLPVNESFGF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3062011599541	2	622.303321	1242.59209	2.2666	0.0014105	0.2578	0.00016043	2.5244	0.001571	622.30347285845	75.241	0.31198	77.022	76.854	77.166	1.7817					24	9	3	0	0	0	0.11083	1	31569	31569		53.833	29.812	1	1777300			2082	3983	1038	1046	2699	2699					-0.01950309076460144
AYLSGMLRF	9	Unmodified	_AYLSGMLRF_					0	0	0		SRP68|p.H201N|1|0.17|ENSG00000167881|chr17:76061535-76061535|G/T|missense_variant;ENST00000587864.1_1_17:74057571-74060203:-|nuORF;nc|ENSG00000167881|Q9UHB9-4|SRP68;nc|ENSG00000167881|Q9UHB9-2|SRP68;ENSG00000167881|ENST00000307877|SRP68	SRP68|p.H201N|1|0.17|ENSG00000167881|chr17:76061535-76061535|G/T|missense_variant	SRP68|p.H201N|1|0.17|ENSG00000167881|chr17:76061535-76061535|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2797729372978	2	529.278595	1056.54264	2.878	0.0015233	-3.4962	-0.0018505	-0.61823	-0.00032722	529.277508941332	62.218	0.349	63.636	63.524	63.873	1.4177					16	10	2	0	0	0	0.057024	1	26095	26095		65.235	29.191	1	3317000			2083	4000	1039	1047	2700	2700					0.016627044337838015
AYLVHIEHL	9	Unmodified	_AYLVHIEHL_					0	0	0		nc|ENSG00000171444|P23508|MCC;MCC|p.R754Lfs*11|1|0.06|ENSG00000171444|chr5:113028982-113028983|-/A|frameshift_variant;ENSG00000171444|ENST00000408903|MCC	nc|ENSG00000171444|P23508|MCC	nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.5368224978447	3	365.537953	1093.59203	-0.48918	-0.00017881	0.28092	0.00010269	-0.20825	-7.6124E-05	365.53795849822154	37.373	0.24324	38.657	38.518	38.761	1.284					33	20	2	0	0	0	0.093059	2	15670	15670;15710		51.63	31.215	1	4612500			2084	4187	1040	1048	2701;2702	2701					0.04897735714234841
AYLVHIEHL	9	Unmodified	_AYLVHIEHL_					0	0	0		nc|ENSG00000171444|P23508|MCC;MCC|p.R754Lfs*11|1|0.06|ENSG00000171444|chr5:113028982-113028983|-/A|frameshift_variant;ENSG00000171444|ENST00000408903|MCC	nc|ENSG00000171444|P23508|MCC	nc|ENSG00000171444|P23508|MCC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.5373412966728	3	365.537953	1093.59203	0.40652	0.0001486	-2.1842	-0.00079842	-1.7777	-0.00064982	365.5372265594375	36.662	0.28639	38.48	38.376	38.663	1.8176					22	19	2	0	0	0	0.11669	1	15391	15391		43.772	23.358	1	3859900			2085	4187	1040	1048	2703	2703					0.04897735714234841
AYMGFINSF	9	Unmodified	_AYMGFINSF_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2438842654228	2	525.241678	1048.4688	3.3745	0.0017724	-1.4729	-0.00077365	1.9015	0.00099876	525.2406280431031	74.405	0.327	75.723	75.561	75.888	1.318					34	10	4	0	0	0	0.12174	2	31257	31211;31257		42.095	23.948	1	3591500			2086	1570	1041	1049	2704;2705	2705					-0.05349263728544429
AYMGFINSF	9	Unmodified	_AYMGFINSF_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1049.477099597454	1	1049.47608	1048.4688	3.3443	0.0035097	-2.0692	-0.0021716	1.275	0.0013381	1049.474129148435	74.464	0.29662	75.782	75.591	75.888	1.318					14	9	2	0	0	0	0.10722	2	31223	31223;31275		46.921	8.7697	1	1827500			2087	1570	1041	1049	2706;2707	2706					-0.05349263728544429
AYMGFINSF	9	Unmodified	_AYMGFINSF_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2427245974541	2	525.241678	1048.4688	3.0618	0.0016082	-1.3065	-0.00068621	1.7553	0.00092197	525.2411328417951	73.958	0.33342	75.754	75.567	75.9	1.7962					26	10	3	0	0	0	0.076627	1	31014	31014		57.471	28.985	1	2708800			2088	1570	1041	1049	2708	2708					-0.05349263728544429
AYMGFINSF	9	Unmodified	_AYMGFINSF_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1049.47608	1048.4688	3.977	0.0041738	-2.9383	-0.0030837	1.0388	0.0010902	1049.4722634107009	73.997	0.27237	75.794	75.597	75.869	1.7962	0.0059962	-0.00050958	NaN	46.921	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1445600			2089	1570	1041	1049							-0.05349263728544429
AYMPHTFFI	9	Unmodified	_AYMPHTFFI_					0	0	0		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7769042849541	2	563.773145	1125.53174	2.5666	0.001447	0.37278	0.00021016	2.9393	0.0016571	563.7737177304173	63.388	0.42964	64.801	64.596	65.025	1.4134					42	13	4	0	0	0	0.051699	3	26555	26555;26599;26645		67.344	35.038	1	12123000			2090	3174	1042	1050	2709;2710;2711	2709					-0.026006979405110542
AYMPHTFFI	9	Unmodified	_AYMPHTFFI_					0	0	0		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7744628787041	2	563.773145	1125.53174	2.482	0.0013993	-0.14221	-8.0174E-05	2.3398	0.0013191	563.7732894937743	62.822	0.43299	64.766	64.532	64.965	1.9444					36	13	4	0	0	0	0.031324	3	26362	26320;26362;26407		85.357	45.399	1	9211400			2091	3174	1042	1050	2712;2713;2714	2713					-0.026006979405110542
AYMPHTFFI	9	Oxidation (M)	_AYM(Oxidation (M))PHTFFI_		AYM(1)PHTFFI		AYM(44)PHTFFI	0	0	1		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2728149294853	2	571.770603	1141.52665	1.1567	0.00066136	0.54851	0.00031362	1.7052	0.00097498	571.7712367332047	52.673	0.44734	54.646	54.289	54.736	1.9722					23	13	2	0	0	0	0.11478	1	22068	22068		44.407	24.968	1	794250			2092	3174	1042	1051	2715	2715		56			-0.038450018031426225
AYMPHTFFI	9	Oxidation (M)	_AYM(Oxidation (M))PHTFFI_					0	0	1		nc|ENSG00000147162|O15294-4|OGT;nc|ENSG00000147162|O15294-2|OGT;nc|ENSG00000147162|O15294-3|OGT;ENSG00000147162|ENST00000373719|OGT	nc|ENSG00000147162|O15294-4|OGT	nc|ENSG00000147162|O15294-4|OGT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	571.770603	1141.52665	0.70842	0.00040506	2.2051	0.0012608	2.9135	0.0016659	571.7719533982958	53.163	0.28753	54.563	54.346	54.633	1.4005	-0.041181	0.00085187	NaN	44.407	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1144400			2093	3174	1042	1051				56			-0.038450018031426225
AYNAVSFTW	9	Unmodified	_AYNAVSFTW_					0	0	0		nc|ENSG00000083307|Q6ISB3-2|GRHL2;ENSG00000083307|ENST00000646743|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7512084841728	2	529.750724	1057.4869	1.9401	0.0010278	-0.31608	-0.00016744	1.6241	0.00086034	529.7495509983469	65.724	0.26833	67.633	67.466	67.735	1.9085					12	8	2	0	0	0	0.46905	1	27578	27578		16.942	5.302	1	1778900			2094	1038	1043	1052	2716	2716					-0.03954805482203483
AYNDNWFITF	10	Unmodified	_AYNDNWFITF_					0	0	0		LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant;ENSG00000107929|ENST00000316157|LARP4B	LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant	LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.7958862185478	2	645.793121	1289.57169	4.7175	0.0030465	-0.030827	-1.9908E-05	4.6867	0.0030266	645.7931975067662	89.641	0.62501	90.661	90.397	91.022	1.0199					69	19	5	0	0	0	0.05359	4	37753	37709;37753;37804;37862		89.401	56.615	1	35422000			2095	1613	1044	1053	2717;2718;2719;2720	2718					-0.061514797362633544
AYNDNWFITF	10	Unmodified	_AYNDNWFITF_					0	0	0		LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant;ENSG00000107929|ENST00000316157|LARP4B	LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant	LARP4B|p.N543*|1|0.03|ENSG00000107929|chr10:817793-817794|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.7950317263603	2	645.793121	1289.57169	4.581	0.0029583	-0.5295	-0.00034195	4.0515	0.0026164	645.7927895733716	89.225	0.49827	90.63	90.36	90.858	1.4044					56	15	5	0	0	0	0.048298	4	37659	37536;37580;37619;37659		89.401	63.133	1	27589000			2096	1613	1044	1053	2721;2722;2723;2724	2724					-0.061514797362633544
AYNEGIINLL	10	Unmodified	_AYNEGIINLL_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;ENST00000531771.5_1_11:85718509-85733504:-|nuORF	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3075439333916	2	560.305864	1118.59717	2.8112	0.0015752	-1.687	-0.00094524	1.1242	0.00062992	560.3060380579037	78.829	0.4369	80.095	79.848	80.284	1.2668					36	13	4	0	0	0	0.05359	2	33103	33052;33103		89.401	32.859	1	5918900			2097	906	1045	1054	2725;2726	2726					0.04261994786179457
AYNEGIINLL	10	Unmodified	_AYNEGIINLL_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;ENST00000531771.5_1_11:85718509-85733504:-|nuORF	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3074218630791	2	560.305864	1118.59717	2.0731	0.0011616	-1.7739	-0.00099394	0.29915	0.00016762	560.3059760152752	78.303	0.46473	80.038	79.824	80.289	1.735					34	14	3	0	0	0	0.058871	2	32854	32807;32854		93.166	29.603	1	5589000			2098	906	1045	1054	2727;2728	2728					0.04261994786179457
AYNFQNSFK	9	Unmodified	_AYNFQNSFK_					0	0	0			REV__ENST00000503548.1_1_4:1379569-1379746:+|nuORF	REV__ENST00000503548.1_1_4:1379569-1379746:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	373.8945190310478	3	373.513696	1117.51926	0.23175	8.6561E-05	0.3024	0.00011295	0.53415	0.00019951	373.51376107199	23.032	0.34003	24.683	24.498	24.838	1.6511					17	10	2	0	0	0	0.11645	1	9570	9570		1.0715	0.10919	1	1768500	+		2099	10708	1046	1055	2729	2729					-0.03480018079198999
AYNPMARDLF	10	Unmodified	_AYNPMARDLF_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.2870971560478	2	599.289691	1196.56483	1.4004	0.00083927	-3.5621	-0.0021347	-2.1616	-0.0012954	599.2858330819777	48.795	0.30814	50.183	50.018	50.326	1.388					19	9	3	0	0	0	0.19554	1	20439	20439		49.527	19.302	1	1589100			2100	5084	1047	1056	2730	2730					-0.02559115888470842
AYNPMARDLF	10	Unmodified	_AYNPMARDLF_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	599.289691	1196.56483	2.2104	0.0013247	-2.4391	-0.0014617	-0.22867	-0.00013704	599.287900428295	48.33	0.30595	50.307	50.084	50.39	1.9772	0.062263	0.00056594	NaN	49.527	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1126100			2101	5084	1047	1056							-0.02559115888470842
AYPEYLITF	9	Unmodified	_AYPEYLITF_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.7855712771416	2	558.784233	1115.55391	2.7721	0.001549	-1.0276	-0.00057418	1.7446	0.00097484	558.7837904983511	79.54	0.59008	80.792	80.488	81.078	1.2512					52	18	4	0	0	0	0.1735	3	33330	33330;33375;33425		36.044	21.206	1	6957900			2102	4271	1048	1057	2731;2732;2733	2731					0.0007580500889616815
AYPEYLITF	9	Unmodified	_AYPEYLITF_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1116.565112292767	1	1116.56119	1115.55391	2.3639	0.0026394	-0.931	-0.0010395	1.4329	0.0015999	1116.5620501245485	79.503	0.40443	80.754	80.582	80.987	1.2512					27	12	3	0	0	0	0.10294	1	33391	33391		48.346	18.121	1	1840400			2103	4271	1048	1057	2734	2734					0.0007580500889616815
AYPEYLITF	9	Unmodified	_AYPEYLITF_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.7836791872978	2	558.784233	1115.55391	1.9578	0.001094	0.63289	0.00035365	2.5907	0.0014476	558.7846505478813	79.034	0.46359	80.769	80.537	81.001	1.735					45	14	4	0	0	0	0.24063	3	33103	33103;33151;33201		28.487	11.545	1	14939000			2104	4271	1048	1057	2735;2736;2737	2735					0.0007580500889616815
AYPEYLITF	9	Unmodified	_AYPEYLITF_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173200|Q460N3-2|PARP15;ENSG00000173200|ENST00000464300|PARP15	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1116.562915027142	1	1116.56119	1115.55391	1.9604	0.0021889	-0.85651	-0.00095635	1.1039	0.0012326	1116.5618314671917	79.025	0.34163	80.76	80.598	80.94	1.735					18	10	3	0	0	0	0.13873	1	33133	33133		39.957	16.809	1	1966700			2105	4271	1048	1057	2738	2738					0.0007580500889616815
AYPHNLMTF	9	Oxidation (M)	_AYPHNLM(Oxidation (M))TF_		AYPHNLM(1)TF		AYPHNLM(82)TF	0	0	1		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2584716677666	2	555.257859	1108.50117	0.60018	0.00033326	-0.2598	-0.00014425	0.34039	0.000189	555.2579515997842	31.652	0.59407	32.933	32.686	33.28	1.2813					51	19	4	0	0	0	0.033794	3	13272	13222;13272;13327		81.613	52.531	1	4814000			2106	820	1049	1058	2739;2740;2741	2740		12			-0.04874476325562682
AYPHNLMTF	9	Oxidation (M)	_AYPHNLM(Oxidation (M))TF_		AYPHNLM(1)TF		AYPHNLM(110)TF	0	0	1		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2589599490166	2	555.257859	1108.50117	0.78896	0.00043807	-0.2698	-0.00014981	0.51915	0.00028826	555.2581615150025	31.09	0.70636	32.915	32.684	33.39	1.8246					53	23	3	0	0	0	0.0075027	3	13034	12987;13034;13085		112.59	78.191	1	4604300			2107	820	1049	1058	2742;2743;2744	2743		12			-0.04874476325562682
AYPHNLMTF	9	Unmodified	_AYPHNLMTF_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2618896365166	2	547.260402	1092.50625	1.7506	0.00095804	0.23703	0.00012972	1.9876	0.0010878	547.2608701074838	45.632	1.0117	47.007	46.637	47.649	1.3751					113	31	5	0	0	0	3.7622E-05	7	19169	19014;19053;19091;19130;19169;19208;19251		158.2	103.43	1	24480000			2108	820	1049	1059	2745;2746;2747;2748;2749;2750;2751	2749					-0.03630172462931114
AYPHNLMTF	9	Unmodified	_AYPHNLMTF_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2618286013603	2	547.260402	1092.50625	1.71	0.00093579	0.17432	9.5396E-05	1.8843	0.0010312	547.2608902141842	45.073	1.0767	47.032	46.671	47.747	1.9596					121	33	5	0	0	0	0.00015001	7	18864	18779;18825;18864;18903;18943;18983;19033		144.35	89.577	1	19706000			2109	820	1049	1059	2752;2753;2754;2755;2756;2757;2758	2754					-0.03630172462931114
AYPPAPFMHI	10	Unmodified	_AYPPAPFMHI_					0	0	0		ENST00000484819.1_1_1:154238957-154241481:+|nuORF;CTSB-UBAP2L|1|fusion;WDR59-UBAP2L|1|fusion;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2875244021416	2	572.28642	1142.55829	0.63773	0.00036497	-2.3133	-0.0013239	-1.6756	-0.00095891	572.2847802968355	57.386	0.40208	58.8	58.551	58.953	1.4145					22	14	2	0	0	0	0.19438	2	24043	24043;24089		49.669	32.556	1	3880800			2110	384	1050	1060	2759;2760	2759					-0.007290090491551382
AYPPAPFMHI	10	Unmodified	_AYPPAPFMHI_					0	0	0		ENST00000484819.1_1_1:154238957-154241481:+|nuORF;CTSB-UBAP2L|1|fusion;WDR59-UBAP2L|1|fusion;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2841064333916	2	572.28642	1142.55829	0.85262	0.00048794	-4.007	-0.0022932	-3.1544	-0.0018052	572.2827847952752	56.785	0.41655	58.754	58.516	58.933	1.9684					23	13	3	0	0	0	0.19438	1	23818	23818		49.669	26.933	1	3648900			2111	384	1050	1060	2761	2761					-0.007290090491551382
AYPPAPFMHIL	11	Unmodified	_AYPPAPFMHIL_					0	0	0		ENST00000484819.1_1_1:154238957-154241481:+|nuORF;CTSB-UBAP2L|1|fusion;WDR59-UBAP2L|1|fusion;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.8281738162041	2	628.828452	1255.64235	1.7195	0.0010813	0.31207	0.00019624	2.0316	0.0012775	628.8283218041236	71.495	0.60991	72.836	72.42	73.03	1.3415					41	19	3	0	0	0	0.25089	2	29986	29986;30036		36.044	23.804	1	2200300			2112	384	1051	1061	2762;2763	2762					0.024755220477572948
AYPPAPFMHIL	11	Unmodified	_AYPPAPFMHIL_					0	0	0		ENST00000484819.1_1_1:154238957-154241481:+|nuORF;CTSB-UBAP2L|1|fusion;WDR59-UBAP2L|1|fusion;nc|ENSG00000143569|Q14157-3|UBAP2L;ENSG00000143569|ENST00000428931|UBAP2L;nc|ENSG00000143569|Q14157-5|UBAP2L	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	ENST00000484819.1_1_1:154238957-154241481:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.8311035037041	2	628.828452	1255.64235	0.51145	0.00032162	1.2469	0.00078406	1.7583	0.0011057	628.8288474242478	71.01	0.54492	72.834	72.458	73.003	1.824					44	17	3	0	0	0	0.25089	2	29799	29750;29799		36.044	23.002	1	2541200			2113	384	1051	1061	2764;2765	2765					0.024755220477572948
AYQFYEAI	8	Unmodified	_AYQFYEAI_					0	0	0		tr|A0A553SFQ9|A0A553SFQ9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09300PE=4SV=1	tr|A0A553SFQ9|A0A553SFQ9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09300PE=4SV=1	tr|A0A553SFQ9|A0A553SFQ9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7422363162041	2	502.739825	1003.4651	3.0523	0.0015345	-0.40147	-0.00020183	2.6508	0.0013327	502.7400036404695	65.31	0.58792	66.709	66.476	67.064	1.3989					37	18	3	0	0	0	0.7006	1	27370	27370		30.225	4.8255	1	2861200			2114	16073	1052	1062	2766	2766					-0.036496102307751244
AYQHLFYLL	9	Unmodified	_AYQHLFYLL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3146850466728	2	584.313492	1166.61243	2.2798	0.0013321	0.22633	0.00013225	2.5061	0.0014643	584.3136710482034	71.273	0.72678	72.614	72.364	73.091	1.3415					52	23	3	0	0	0	0.069258	2	29850	29850;29901		60.39	16.229	1	49155000			2115	2927	1053	1063	2767;2768	2767					0.03578906374059443
AYQHLFYLL	9	Unmodified	_AYQHLFYLL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000183856|ENST00000361170|IQGAP3	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3141967654228	2	584.313492	1166.61243	0.98663	0.0005765	1.0418	0.00060871	2.0284	0.0011852	584.3141515252156	70.723	0.51324	72.561	72.319	72.832	1.8378					46	16	3	0	0	0	0.051699	3	29652	29608;29652;29703		67.344	17.411	1	45497000			2116	2927	1053	1063	2769;2770;2771	2770					0.03578906374059443
AYQLMTDVF	9	Unmodified	_AYQLMTDVF_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2605468630791	2	544.260068	1086.50558	1.2435	0.00067681	0.29694	0.00016161	1.5405	0.00083842	544.2596026328007	70.626	0.60777	72.464	72.073	72.681	1.8378					49	19	4	0	0	0	0.10993	1	29656	29656		46.021	24.274	1	9647000			2117	724	1054	1064	2772	2772					-0.034210119026511165
AYQLMTDVF	9	Unmodified	_AYQLMTDVF_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	nc|ENSG00000055917|Q8TB72-2|PUM2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	544.260068	1086.50558	2.4954	0.0013581	-0.51662	-0.00028118	1.9787	0.0010769	544.2589962686556	71.064	0.67152	72.405	71.957	72.629	1.3415	-0.029337	-0.00052223	NaN	46.021	54	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14372000			2118	724	1054	1064							-0.034210119026511165
AYQLMVDVF	9	Unmodified	_AYQLMVDVF_					0	0	0		nc|ENSG00000134644|Q14671-4|PUM1;PUM1-NKAIN1|5|fusion;PUM1-NKAIN1|4|fusion;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2713500857353	2	543.270435	1084.52632	2.5785	0.0014008	-0.51591	-0.00028028	2.0626	0.0011205	543.2703423356335	80.494	0.4549	81.745	81.575	82.03	1.2512					37	14	3	0	0	0	0.051699	3	33813	33771;33813;33862		67.344	45.597	1	5920500			2119	2627	1055	1065	2773;2774;2775	2774					-0.012564215229986075
AYQLMVDVF	9	Unmodified	_AYQLMVDVF_					0	0	0		nc|ENSG00000134644|Q14671-4|PUM1;PUM1-NKAIN1|5|fusion;PUM1-NKAIN1|4|fusion;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2711669802666	2	543.270435	1084.52632	1.169	0.00063507	0.48432	0.00026312	1.6533	0.00089818	543.2709166369575	80.086	0.39622	81.803	81.568	81.964	1.7167					32	12	3	0	0	0	0.076627	2	33596	33544;33596		57.471	32.339	1	4573900			2120	2627	1055	1065	2776;2777	2777					-0.012564215229986075
AYQLMVDVF	9	Unmodified	_AYQLMVDVF_					0	0	0		nc|ENSG00000134644|Q14671-4|PUM1;PUM1-NKAIN1|5|fusion;PUM1-NKAIN1|4|fusion;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2701904177666	2	543.270435	1084.52632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.251	1	81.968	81.468	82.468	1.7167								0	0	0	0.22015	1	33662	33662		24.674	14.49	1				2121	2627	1055	1065	2778	2778					-0.012564215229986075
AYRPLTHCAKM	11	Unmodified	_AYRPLTHCAKM_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8878661990166	3	430.88637	1289.63728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.54	1	110.59	110.09	111.09	0.047043								0	0	0	0.63775	1	47681	47681		0.094841	0	1		+		2122	11006	1056	1066	2779	2779					0.0040489491343578266
AYRRRLWKWW	10	Unmodified	_AYRRRLWKWW_					0	0	0		ENST00000461642.2_1_20:25470551-25477423:-|nuORF	ENST00000461642.2_1_20:25470551-25477423:-|nuORF	ENST00000461642.2_1_20:25470551-25477423:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2918578982353	3	507.617712	1519.83131	2.0401	0.0010356	0.80863	0.00041047	2.8487	0.0014461	507.6175963092587	44.819	1.2697	45.146	44.575	45.844	0.32674					127	42	5	0	0	0	0.89803	1	19016	19016		0.13989	0.04505	1	11957000			2123	6673	1057	1067	2780	2780					0.09218355456050631
AYSCGDAY	8	Unmodified	_AYSCGDAY_					0	0	0			REV__ENST00000552916.5_1_12:56965569-56983042:+|nuORF	REV__ENST00000552916.5_1_12:56965569-56983042:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	425.1570617556572	2	425.157811	848.301069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104	1	104	103.5	104.5	0								0	0	0	1.0178	1	43804	43804		2.5775	0	1		+		2124	13840	1058	1068	2781	2781					-0.1291495099317217
AYSDGHFLF	9	Unmodified	_AYSDGHFLF_					0	0	0		TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant;ENSG00000149256|ENST00000278550|TENM4	TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant	TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7421752810478	2	528.742899	1055.47125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.328	1	52.305	51.805	52.805	1.9772								0	0	0	0.317	1	21083	21083		16.942	1.0951	1				2125	3234	1059	1069	2782	2782					-0.054270919992632116
AYSDIVKMI	9	Unmodified	_AYSDIVKMI_					0	0	0		ENST00000498129.6_1_1:212502517-212507353:+|nuORF;nc|ENSG00000066027|Q15172-2|PPP2R5A;ENSG00000066027|ENST00000261461|PPP2R5A	ENST00000498129.6_1_1:212502517-212507353:+|nuORF	ENST00000498129.6_1_1:212502517-212507353:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2770263552666	2	520.27826	1038.54197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.288	1	57.698	57.198	58.198	1.4099								0	0	0	0.27791	1	23589	23589		20.454	2.3073	1				2126	797	1060	1070	2783	2783					0.024238649940798496
AYSEAIFEL	9	Unmodified	_AYSEAIFEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1042.509814441204	1	1042.50915	1041.50188	1.9324	0.0020145	-0.33067	-0.00034472	1.6017	0.0016698	1042.5083943052907	71.302	0.29665	72.644	72.451	72.748	1.3415					17	9	2	0	0	0	0.03795	2	29944	29896;29944		77.984	29.638	1	4001800			2127	1573	1061	1071	2784;2785	2785					-0.01721358404847706
AYSEAIFEL	9	Unmodified	_AYSEAIFEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1042.510668933392	1	1042.50915	1041.50188	2.0501	0.0021373	-0.40017	-0.00041718	1.65	0.0017201	1042.5087348145114	70.829	0.39112	72.667	72.441	72.832	1.8378					23	12	2	0	0	0	0.03795	2	29723	29673;29723		77.984	26.287	1	4019500			2128	1573	1061	1071	2786;2787	2787					-0.01721358404847706
AYSEAIFEL	9	Unmodified	_AYSEAIFEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7596313357353	2	521.758215	1041.50188	0.86985	0.00045385	1.4783	0.00077132	2.3482	0.0012252	521.7594377962865	70.767	0.42118	72.605	72.411	72.832	1.8378					24	13	3	0	0	0	0.087207	1	29696	29696		53.576	2.7205	1	2559700			2129	1573	1061	1071	2788	2788					-0.01721358404847706
AYSEAIFEL	9	Unmodified	_AYSEAIFEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	521.758215	1041.50188	2.3917	0.0012479	1.1022	0.00057509	3.4939	0.001823	521.7590863876718	71.302	0.32838	72.644	72.451	72.779	1.3415	0.019242	-0.00022429	NaN	53.576	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1373800			2130	1573	1061	1071							-0.01721358404847706
AYSEIAYLF	9	Unmodified	_AYSEIAYLF_					0	0	0		ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7729369997978	2	538.768583	1075.52261	2.4395	0.0013143	3.08	0.0016594	5.5194	0.0029737	538.7703835184643	78.538	0.31192	80.273	80.07	80.382	1.735					17	9	3	0	0	0	0.22519	1	32945	32945		30.225	7.0764	1	1980400			2131	2636	1062	1072	2789	2789					-0.012127680251978745
AYSEIAYLF	9	Unmodified	_AYSEIAYLF_					0	0	0		ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	538.768583	1075.52261	2.9619	0.0015958	1.3648	0.00073529	4.3267	0.0023311	538.7687306630377	78.987	0.3408	80.254	80.099	80.439	1.2668	-0.009507	-0.0012298	NaN	30.225	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	848080			2132	2636	1062	1072							-0.012127680251978745
AYSIFVTVIP	10	Unmodified	_AYSIFVTVIP_					0	0	0			REV__ENSG00000170953|ENST00000306842|OR8B12	REV__ENSG00000170953|ENST00000306842|OR8B12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1109.628832995892	1	1109.62412	1108.61685	3.7151	0.0041224	0.98396	0.0010918	4.6991	0.0052142	1109.6252528885188	101.19	0.17514	101.25	101.15	101.33	0.067009					14	5	4	0	0	0	0.846	1	42356	42356		7.2892	0	1	39832000	+		2133	11005	1063	1073	2790	2790					0.06688370796950949
AYSIVAGVF	9	Unmodified	_AYSIVAGVF_					0	0	0		ENSG00000051523|ENST00000261623|CYBA;ENST00000566534.5_1_16:88713161-88717421:-|nuORF;ENST00000562209.1_1_16:88713507-88717421:-|nuORF	ENSG00000051523|ENST00000261623|CYBA	ENSG00000051523|ENST00000261623|CYBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	926.5009033083916	1	926.498195	925.490919	2.7386	0.0025373	0.54887	0.00050853	3.2875	0.0030458	926.498617773605	69.841	0.43953	71.194	70.957	71.397	1.3536					32	13	3	0	0	0	0.046276	2	29334	29280;29334		70.716	15.983	1	8483400			2134	704	1064	1074	2791;2792	2792					0.025192840115323634
AYSIVAGVF	9	Unmodified	_AYSIVAGVF_					0	0	0		ENSG00000051523|ENST00000261623|CYBA;ENST00000566534.5_1_16:88713161-88717421:-|nuORF;ENST00000562209.1_1_16:88713507-88717421:-|nuORF	ENSG00000051523|ENST00000261623|CYBA	ENSG00000051523|ENST00000261623|CYBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	926.5007812380791	1	926.498195	925.490919	2.0437	0.0018935	0.64931	0.00060158	2.693	0.0024951	926.4984938775585	69.33	0.44222	71.183	70.977	71.419	1.853					37	13	4	0	0	0	0.033521	3	29095	29049;29095;29136		81.864	18.301	1	7789800			2135	704	1064	1074	2793;2794;2795	2794					0.025192840115323634
AYSLNFPLL	9	Unmodified	_AYSLNFPLL_					0	0	0		nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1;ENST00000561693.5_1_15:75648526-75649300:-|nuORF;ENST00000564929.5_1_15:75648526-75649229:-|nuORF	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2903930544853	2	519.286943	1036.55933	5.3704	0.0027888	-0.32462	-0.00016857	5.0457	0.0026202	519.2868504589544	89.519	0.46837	90.539	90.3	90.769	1.0199					33	14	3	0	0	0	0.093059	1	37760	37760		67.344	33.241	1	1867500			2136	2914	1065	1075	2796	2796					0.042515285913850676
AYSPAIQMF	9	Unmodified	_AYSPAIQMF_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2504150271416	2	514.249503	1026.48445	3.1445	0.0016171	0.1291	6.6391E-05	3.2736	0.0016835	514.250256971861	62.346	0.46709	63.763	63.524	63.992	1.4177					27	14	3	0	0	0	0.051699	1	26114	26114		67.344	25.249	1	2106800			2137	1396	1066	1076	2797	2797					-0.027729772114980733
AYSPAIQMF	9	Unmodified	_AYSPAIQMF_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2498046755791	2	514.249503	1026.48445	2.9495	0.0015168	-0.92905	-0.00047776	2.0204	0.001039	514.2495855630365	61.777	0.41068	63.735	63.497	63.908	1.9571					26	12	3	0	0	0	0.09539	1	25904	25904		50.855	31.416	1	2006800			2138	1396	1066	1076	2798	2798					-0.027729772114980733
AYSPRFLYI	9	Unmodified	_AYSPRFLYI_					0	0	0		nc|ENSG00000131844|Q9HCC0-2|MCCC2;ENSG00000131844|ENST00000340941|MCCC2;MCCC2|p.I560Afs*9|1|0.06|ENSG00000131844|chr5:71656845-71656846|-/GCCAAGTGTGGTAGCGCACTCCTGTA|frameshift_variant	nc|ENSG00000131844|Q9HCC0-2|MCCC2	nc|ENSG00000131844|Q9HCC0-2|MCCC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3068115115166	2	565.305667	1128.59678	1.4598	0.00082522	-1.9047	-0.0010767	-0.44493	-0.00025152	565.3052999367909	58.356	0.28016	60.325	60.148	60.429	1.969					14	8	2	0	0	0	0.11669	1	24470	24470		43.772	19.752	1	2362000			2139	2507	1067	1077	2799	2799					0.03762619856979654
AYSTVPGYYSW	11	Unmodified	_AYSTVPGYYSW_					0	0	0		nc|ENSG00000165806|P55210-4|CASP7;ENSG00000165806|ENST00000369318|CASP7;nc|ENSG00000165806|P55210-3|CASP7	nc|ENSG00000165806|P55210-4|CASP7	nc|ENSG00000165806|P55210-4|CASP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	647.2964965701103	2	647.292953	1292.57135	2.1473	0.0013899	0.86787	0.00056177	3.0151	0.0019517	647.2934863988904	59.364	0.34195	60.784	60.648	60.99	1.4196					18	10	2	0	0	0	0.31972	1	24906	24906		30.637	7.9003	1	1485000			2140	3860	1068	1078	2800	2800					-0.06322899456085906
AYSTVPGYYSW	11	Unmodified	_AYSTVPGYYSW_					0	0	0		nc|ENSG00000165806|P55210-4|CASP7;ENSG00000165806|ENST00000369318|CASP7;nc|ENSG00000165806|P55210-3|CASP7	nc|ENSG00000165806|P55210-4|CASP7	nc|ENSG00000165806|P55210-4|CASP7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	647.292953	1292.57135	2.401	0.0015541	1.0264	0.0006644	3.4274	0.0022185	647.2930378059958	58.921	0.34742	60.89	60.784	61.131	1.969	0.052879	0.00015192	NaN	30.637	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	884990			2141	3860	1068	1078							-0.06322899456085906
AYTLLGHEF	9	Unmodified	_AYTLLGHEF_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7663452029228	2	525.766374	1049.5182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.266	1	54.667	54.167	55.167	1.4005								0	0	0	0.026264	1	22292	22292		74.423	37.917	1				2142	476	1069	1079	2801	2801					-0.004582324480907118
AYTLLGHEF	9	Unmodified	_AYTLLGHEF_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7670776247978	2	525.766374	1049.5182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.38	1	54.781	54.281	55.281	1.4005								0	0	0	0.026264	1	22340	22340		74.423	44.582	1				2143	476	1069	1079	2802	2802					-0.004582324480907118
AYTLLGHEF	9	Unmodified	_AYTLLGHEF_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7664062380791	2	525.766374	1049.5182	1.0309	0.00054204	2.3749	0.0012486	3.4058	0.0017907	525.7655167385499	52.748	0.37075	54.72	54.512	54.883	1.9722					22	15	2	0	0	0	0.042029	2	22100	22100;22145		74.423	36.449	1	8547800			2144	476	1069	1079	2803;2804	2803					-0.004582324480907118
AYTPFHAVL	9	Unmodified	_AYTPFHAVL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7721130251884	2	509.77146	1017.52837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.846	1	49.229	48.729	49.729	1.3825								0	0	0	0.00040718	1	20029	20029		106.85	39.502	1				2145	2839	1070	1080	2805	2805					0.0203037527712695
AYTPFHAVL	9	Unmodified	_AYTPFHAVL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7726013064384	2	509.77146	1017.52837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.963	1	49.351	48.851	49.851	1.388								0	0	0	3.7237E-07	1	20078	20078		120.86	53.513	1				2146	2839	1070	1080	2806	2806					0.0203037527712695
AYTPFHAVL	9	Unmodified	_AYTPFHAVL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7730590701103	2	509.77146	1017.52837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.056	1	49.444	48.944	49.944	1.388								0	0	0	0.025786	1	20117	20117		86.121	35.266	1				2147	2839	1070	1080	2807	2807					0.0203037527712695
AYTPFHAVL	9	Unmodified	_AYTPFHAVL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7719909548759	2	509.77146	1017.52837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.151	1	49.539	49.039	50.039	1.388								0	0	0	0.048885	1	20156	20156		56.541	14.447	1				2148	2839	1070	1080	2808	2808					0.0203037527712695
AYTPFHAVL	9	Unmodified	_AYTPFHAVL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7729369997978	2	509.77146	1017.52837	2.8742	0.0014652	-0.55383	-0.00028233	2.3204	0.0011829	509.7712535936209	47.444	0.77932	49.42	48.902	49.681	1.976					76	24	6	0	0	0	0.0052927	4	19872	19825;19872;19911;19968		120.86	64.316	1	36148000			2149	2839	1070	1080	2809;2810;2811;2812	2810					0.0203037527712695
AYTTEHWLV	9	Unmodified	_AYTTEHWLV_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A;ENST00000526364.1_1_11:125488416-125491330:+|nuORF	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2756225466728	2	560.277106	1118.53966	2.247	0.0012589	-2.485	-0.0013923	-0.23799	-0.00013334	560.2761321154817	44.218	0.28195	46.162	46.021	46.303	1.9438					13	8	2	0	0	0	0.54523	1	18547	18547		13.508	4.9146	1	724760			2150	2642	1071	1081	2813	2813					-0.014868474193917791
AYVDFLDKL	9	Unmodified	_AYVDFLDKL_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2924072146416	2	542.289682	1082.56481	2.405	0.0013042	1.0498	0.00056931	3.4549	0.0018735	542.2905589630337	84.38	0.32816	85.976	85.829	86.158	1.5962					25	10	3	0	0	0	0.3154	1	35389	35389		24.674	6.5389	1	4112600	+		2151	10054	1072	1082	2814	2814					0.026832073831883463
AYVEWFNRL	9	Unmodified	_AYVEWFNRL_					0	0	0		nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;ENSG00000138670|ENST00000264400|RASGEF1B	nc|ENSG00000138670|Q0VAM2-2|RASGEF1B	nc|ENSG00000138670|Q0VAM2-2|RASGEF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3057739138603	2	599.306198	1196.59784	2.6602	0.0015943	-1.4603	-0.00087519	1.1999	0.0007191	599.3053736550169	63.355	0.27973	64.768	64.596	64.876	1.4134					22	8	3	0	0	0	0.037761	2	26579	26531;26579		78.149	43.217	1	1810400			2152	2845	1073	1083	2815;2816	2816					0.0074083422589410475
AYVEWFNRL	9	Unmodified	_AYVEWFNRL_					0	0	0		nc|ENSG00000138670|Q0VAM2-2|RASGEF1B;nc|ENSG00000138670|Q0VAM2-3|RASGEF1B;ENSG00000138670|ENST00000264400|RASGEF1B	nc|ENSG00000138670|Q0VAM2-2|RASGEF1B	nc|ENSG00000138670|Q0VAM2-2|RASGEF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3060790896416	2	599.306198	1196.59784	2.6317	0.0015772	-1.1535	-0.0006913	1.4781	0.00088586	599.30524695091	62.708	0.31225	64.653	64.532	64.845	1.9444					24	9	3	0	0	0	0.091139	1	26327	26327		52.268	28.479	1	1506000			2153	2845	1073	1083	2817	2817					0.0074083422589410475
AYVGDVPIL	9	Unmodified	_AYVGDVPIL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	946.5262328982353	1	946.52441	945.517133	1.4152	0.0013395	2.5144	0.00238	3.9296	0.0037194	946.5238705260742	67.008	0.40418	68.397	68.153	68.557	1.3888					24	12	3	0	0	0	0.078975	1	28110	28110		56.541	5.6862	1	1836400			2154	2886	1074	1084	2818	2818					0.04219553183008884
AYVGDVPIL	9	Unmodified	_AYVGDVPIL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	946.5270873904228	1	946.52441	945.517133	1.7768	0.0016818	1.4637	0.0013855	3.2405	0.0030672	946.5234632124312	66.53	0.31138	68.419	68.245	68.557	1.8889					17	9	2	0	0	0	0.070759	2	27907	27907;27956		59.795	15.388	1	1659900			2155	2886	1074	1084	2819;2820	2819					0.04219553183008884
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(110)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7663452029228	2	560.765852	1119.51715	0.76587	0.00042947	0.09394	5.2678E-05	0.85981	0.00048215	560.7659102010022	19.248	0.24798	20.307	20.164	20.412	1.0585					25	7	4	0	0	0	0.0082953	2	8049	7997;8049		109.63	81.142	1	4402800			2156	2885	1075	1085	2821;2822	2822		51			-0.03782770088673715
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(100)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7662231326103	2	560.765852	1119.51715	0.80394	0.00045082	0.21861	0.00012259	1.0225	0.00057341	560.766073155866	19.5	0.817	20.558	20.412	21.229	1.0585					47	25	4	0	0	0	0.013238	2	8151	8101;8151		104.8	77.048	1	3537700			2157	2885	1075	1085	2823;2824	2824		51			-0.03782770088673715
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(89)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7660400271416	2	560.765852	1119.51715	0.34597	0.00019401	0.22238	0.00012471	0.56835	0.00031871	560.7659851298341	18.682	0.27889	20.13	19.994	20.273	1.448					29	8	4	0	0	0	0.028763	2	7800	7750;7800		89.427	66.278	1	4227900			2158	2885	1075	1085	2825;2826	2826		51			-0.03782770088673715
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(44)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1798278689384	3	374.17966	1119.51715	0.059947	2.2431E-05	-0.30719	-0.00011494	-0.24724	-9.2513E-05	374.17977300958984	18.683	0.36469	20.131	19.908	20.273	1.448					44	11	5	0	0	0	0.11669	1	7784	7784		43.772	21.036	1	25934000			2159	2885	1075	1085	2827	2827		51			-0.03782770088673715
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(97)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7662231326103	2	560.765852	1119.51715	0.35806	0.00020079	0.09338	5.2364E-05	0.45143	0.00025315	560.766089882195	18.963	0.87764	20.487	20.349	21.226	1.5237					50	28	4	0	0	0	0.022807	2	7902	7853;7902		97.075	68.588	1	6564800			2160	2885	1075	1085	2828;2829	2829		51			-0.03782770088673715
AYVHMVTHF	9	Oxidation (M)	_AYVHM(Oxidation (M))VTHF_		AYVHM(1)VTHF		AYVHM(44)VTHF	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1798889040947	3	374.17966	1119.51715	0.079904	2.9899E-05	-0.28958	-0.00010836	-0.20968	-7.8458E-05	374.17967491078736	18.963	1.78	20.487	20.349	22.128	1.5237					139	58	3	0	0	0	0.11669	1	7911	7911		43.772	29.866	1	29802000			2161	2885	1075	1085	2830	2830		51			-0.03782770088673715
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7714111208916	2	552.768394	1103.52224	0.62225	0.00034396	0.76455	0.00042262	1.3868	0.00076658	552.7691031784309	30.709	0.99752	31.992	31.718	32.715	1.2825					97	31	5	0	0	0	0.010279	8	12847	12813;12847;12860;12910;12950;12991;13032;13083		131.3	97.195	1	48407000			2162	2885	1075	1086	2831;2832;2833;2834;2835;2836;2837;2838	2832					-0.025384662260421464
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	368.8488647341728	3	368.848022	1103.52224	-0.2489	-9.1808E-05	0.86945	0.00032069	0.62054	0.00022889	368.84894375738037	30.73	1.6507	32.012	31.657	33.308	1.2825					175	53	6	0	0	0	0.11669	7	12858	12821;12858;12897;12936;12975;13014;13054		43.772	26.33	1	222450000			2163	2885	1075	1086	2839;2840;2841;2842;2843;2844;2845	2840					-0.025384662260421464
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.8487426638603	3	368.848022	1103.52224	0.4881	0.00018003	-0.25132	-9.2701E-05	0.23678	8.7334E-05	368.8484455085824	30.244	1.7943	32.06	31.706	33.501	1.8151					176	60	6	0	0	0	0.11669	6	12720	12592;12642;12681;12720;12759;12799		43.772	28.524	1	224990000			2164	2885	1075	1086	2846;2847;2848;2849;2850;2851	2849					-0.025384662260421464
AYVHMVTHF	9	Unmodified	_AYVHMVTHF_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7687866091728	2	552.768394	1103.52224	0.73561	0.00040662	0.48354	0.00026729	1.2191	0.00067391	552.7689392523395	30.154	1.0867	31.969	31.738	32.824	1.8151					101	35	5	0	0	0	0.015029	7	12644	12596;12644;12694;12735;12787;12840;12889		131.3	96.728	1	51890000			2165	2885	1075	1086	2852;2853;2854;2855;2856;2857;2858	2853					-0.025384662260421464
AYVLNIVRF	9	Unmodified	_AYVLNIVRF_					0	0	0		nc|ENSG00000143153|P05026-2|ATP1B1;ENSG00000143153|ENST00000367815|ATP1B1	nc|ENSG00000143153|P05026-2|ATP1B1	nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.8249999880791	2	547.821484	1093.62842	1.7199	0.00094219	2.0711	0.0011346	3.791	0.0020768	547.8227233825752	65.841	0.27222	67.75	67.649	67.921	1.9085					15	8	2	0	0	0	0.083604	1	27645	27645		54.774	39.935	1	1409800			2166	3016	1076	1087	2859	2859					0.08534612610924341
AYVLNIVRF	9	Unmodified	_AYVLNIVRF_					0	0	0		nc|ENSG00000143153|P05026-2|ATP1B1;ENSG00000143153|ENST00000367815|ATP1B1	nc|ENSG00000143153|P05026-2|ATP1B1	nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	547.821484	1093.62842	1.7247	0.00094485	4.8462	0.0026549	6.5709	0.0035997	547.824387688576	66.378	0.24744	67.767	67.626	67.874	1.3888	0.008756	0.0005844	NaN	54.774	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1769000			2167	3016	1076	1087							0.08534612610924341
AYVPGFAHI	9	Unmodified	_AYVPGFAHI_					0	0	0		ENST00000477994.1_1_10:104183924-104192326:-|nuORF;ENSG00000107874|ENST00000369937|CUEDC2	ENST00000477994.1_1_10:104183924-104192326:-|nuORF	ENST00000477994.1_1_10:104183924-104192326:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7596008181572	2	487.758352	973.502152	1.981	0.00096626	0.64484	0.00031453	2.6259	0.0012808	487.75858319602355	46.724	0.41331	48.107	47.869	48.283	1.3825					34	12	3	0	0	0	0.08022	3	19573	19523;19573;19613		56.048	17.897	1	9123100			2168	1611	1077	1088	2860;2861;2862	2861					0.01434106105648425
AYVPGFAHI	9	Unmodified	_AYVPGFAHI_					0	0	0		ENST00000477994.1_1_10:104183924-104192326:-|nuORF;ENSG00000107874|ENST00000369937|CUEDC2	ENST00000477994.1_1_10:104183924-104192326:-|nuORF	ENST00000477994.1_1_10:104183924-104192326:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7595092654228	2	487.758352	973.502152	1.4846	0.00072412	0.99705	0.00048632	2.4816	0.0012104	487.7587963410117	46.29	0.37658	48.26	48.033	48.41	1.9703					33	11	4	0	0	0	0.08022	3	19373	19328;19373;19410		56.048	17.897	1	8287700			2169	1611	1077	1088	2863;2864;2865	2864					0.01434106105648425
AYVVFVTTL	9	Unmodified	_AYVVFVTTL_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.576953113079	1	1012.57136	1011.56408	2.0931	0.0021194	2.4667	0.0024977	4.5598	0.0046172	1012.572862261149	77.559	0.38335	78.84	78.631	79.015	1.2809					19	11	2	0	0	0	0.18999	2	32522	32522;32576		34.187	9.5134	1	1533100			2170	535	1078	1089	2866;2867	2866					0.058764127341419226
AYVVFVTTL	9	Unmodified	_AYVVFVTTL_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7895690798759	2	506.789318	1011.56408	1.6853	0.00085409	0.90578	0.00045904	2.5911	0.0013131	506.78849754922334	77.112	0.35374	78.864	78.655	79.009	1.7514					14	10	3	0	0	0	0.28226	1	32301	32301		26.341	8.2063	1	758060			2171	535	1078	1089	2868	2868					0.058764127341419226
AYVVLAIYAT	10	Unmodified	_AYVVLAIYAT_					0	0	0			REV__tr|A0A7D6VS28|A0A7D6VS28_9CLOTLargeribosomalsubunitproteinuL2OS=ClostridiumintestinaleOX=36845GN=rplBPE=3SV=1	REV__tr|A0A7D6VS28|A0A7D6VS28_9CLOTLargeribosomalsubunitproteinuL2OS=ClostridiumintestinaleOX=36845GN=rplBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.2668334841728	2	542.307875	1082.6012	0.65024	0.00035263	-1.9911	-0.0010798	-1.3408	-0.00072714	542.3070585937259	57.382	0.32417	58.796	58.58	58.904	1.4145					15	11	2	0	0	0	0.12381	1	24053	24053		16.942	3.0362	1	2501600	+		2172	15433	1079	1090	2869	2869					0.06320084279877847
AYWRAAVP	8	Unmodified	_AYWRAAVP_					0	0	0		nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1;ENSG00000163357|ENST00000295542|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2534667849541	2	467.250695	932.486836	3.8345	0.0017917	3.465	0.001619	7.2994	0.0034107	467.2520706802291	97.89	0.12999	98.118	98.041	98.171	0.22776					10	4	3	0	0	0	0.88958	1	41188	41188		2.8892	0	1	17028000			2173	3672	1080	1091	2870	2870					0.017892393084594005
AYWRAAVP	8	Unmodified	_AYWRAAVP_					0	0	0		nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1;ENSG00000163357|ENST00000295542|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	467.250695	932.486836	3.5776	0.0016716	3.8444	0.0017963	7.422	0.003468	467.2525696343393	97.792	0.10549	98.049	97.985	98.09	0.25636	-0.034592	0.00014613	NaN	2.8892	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18878000			2174	3672	1080	1091							0.017892393084594005
AYYEVKITF	9	Unmodified	_AYYEVKITF_					0	0	0		tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2992431521416	2	567.297507	1132.58046	2.7855	0.0015802	-0.25361	-0.00014387	2.5319	0.0014364	567.2971330479346	79.532	0.40443	80.783	80.582	80.987	1.2512					39	12	4	0	0	0	0.54523	2	33350	33350;33400		13.508	2.684	1	4256400			2175	16899	1081	1092	2871;2872	2871					0.019474939002293468
AYYEVKITF	9	Unmodified	_AYYEVKITF_					0	0	0		tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	tr|A0A7D6VT51|A0A7D6VT51_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07760PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.2986328005791	2	567.297507	1132.58046	1.9988	0.0011339	-0.38446	-0.0002181	1.6143	0.00091581	567.2971606484117	79.083	0.4035	80.818	80.567	80.97	1.735					33	12	4	0	0	0	0.54523	2	33120	33120;33171		13.508	2.684	1	2637600			2176	16899	1081	1092	2873;2874	2873					0.019474939002293468
AYYPAQGVQQF	11	Unmodified	_AYYPAQGVQQF_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3071777224541	2	636.306395	1270.59824	1.6996	0.0010815	-1.241	-0.00078966	0.45859	0.0002918	636.3049010820645	43.638	0.28228	45.582	45.485	45.767	1.9438					14	8	2	0	0	0	0.33951	1	18326	18326		29.082	14.243	1	585140			2177	1886	1082	1093	2875	2875					-0.02623790844904761
CAEAYNPDE	9	Unmodified	_CAEAYNPDE_					0	0	0		ENSG00000005249|ENST00000265717|PRKAR2B	ENSG00000005249|ENST00000265717|PRKAR2B	ENSG00000005249|ENST00000265717|PRKAR2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.1914855837822	2	506.189839	1010.36513	1.0734	0.00054335	3.4273	0.0017349	4.5007	0.0022782	506.19126254672784	38.337	0.43861	40.173	39.99	40.429	1.8366					32	13	3	0	0	0	0.69306	1	16092	16092		7.609	0.31972	1	2176900			2178	486	1083	1094	2876	2876					-0.13964215626879195
CASVLLLLILI	11	Unmodified	_CASVLLLLILI_					0	0	0			REV__tr|A0A553SHU3|A0A553SHU3_NIACIIron-hydroxamateABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13665PE=3SV=1	REV__tr|A0A553SHU3|A0A553SHU3_NIACIIron-hydroxamateABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13665PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2852966189384	3	390.922528	1169.74575	4.4691	0.0017471	-0.29144	-0.00011393	4.1777	0.0016332	390.9222670097932	87.223	0.40049	88.718	88.518	88.919	1.4953					28	12	3	0	0	0	0.14606	1	36855	36855		0.45452	0	1	2407200	+		2179	14818	1084	1095	2877	2877					0.1676700943553442
CAVKRLGRHT	10	Unmodified	_CAVKRLGRHT_					0	0	0			REV__ENST00000481985.5_1_22:39710087-39711482:-|nuORF	REV__ENST00000481985.5_1_22:39710087-39711482:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.8850585818291	3	380.88547	1139.63458	1.6291	0.00062049	1.4514	0.0005528	3.0804	0.0011733	380.88601018686467	52.064	0.94672	52.389	52.006	52.953	0.32554					99	30	4	0	0	0	0.86348	2	22041	21727;22041		5.4027	1.5264	1	14753000	+		2180	8981	1085	1096	2878;2879	2879					0.07034807570812518
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	851.3967773318291	1	851.396767	850.38949	1.208	0.0010285	-0.2653	-0.00022587	0.94268	0.00080259	851.3958339610203	104.84	0.10899	104.84	104.77	104.88	0					17	5	4	0	0	0	0.89176	1	44340	44340		0.79363	0	1	154520000	+		2181	10868	1086	1097	2880	2880					-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	851.3979980349541	1	851.396767	850.38949	2.7854	0.0023715	-0.84058	-0.00071567	1.9448	0.0016558	851.395113232175	104.8	0.09343	104.85	104.8	104.89	0.056801					14	4	4	0	0	0	0.89008	1	44280	44280		2.5775	0	1	126130000	+		2182	10868	1086	1097	2881	2881					-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	851.3972045779228	1	851.396767	850.38949	2.9626	0.0025223	-1.809	-0.0015401	1.1536	0.00098221	851.3944483330223	104.77	0.094788	104.93	104.86	104.95	0.16055					13	4	4	0	0	0	0.89008	1	44460	44460		2.5775	0	1	147500000	+		2183	10868	1086	1097	2882	2882					-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	851.3979980349541	1	851.396767	850.38949	3.0749	0.002618	-1.5505	-0.0013201	1.5245	0.0012979	851.3949244189064	104.72	0.097443	104.89	104.82	104.92	0.1731					13	4	4	0	0	0	0.89176	1	44376	44376		0.79363	0	1	90992000	+		2184	10868	1086	1097	2883	2883					-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	851.396767	850.38949	1.208	0.0010285	-0.2653	-0.00022587	0.94268	0.00080259	851.3958339610203	104.84	0.10899	104.84	104.77	104.88	0	-0.041701	0.00060122	NaN	2.5775	17	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	154520000	+		2185	10868	1086	1097							-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	851.396767	850.38949	2.7854	0.0023715	-0.84058	-0.00071567	1.9448	0.0016558	851.395113232175	104.8	0.09343	104.85	104.8	104.89	0.056801	-0.023092	0.00011143	NaN	2.5775	14	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126130000	+		2186	10868	1086	1097							-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	851.396767	850.38949	2.9626	0.0025223	-1.809	-0.0015401	1.1536	0.00098221	851.3944483330223	104.77	0.094788	104.93	104.86	104.95	0.16055	0.048458	-0.00071304	NaN	2.5775	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147500000	+		2187	10868	1086	1097							-0.041689106827107025
CAVYLADP	8	Unmodified	_CAVYLADP_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	851.396767	850.38949	3.0749	0.002618	-1.5505	-0.0013201	1.5245	0.0012979	851.3949244189064	104.72	0.097443	104.89	104.82	104.92	0.1731	0.016335	-0.00049298	NaN	2.5775	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90992000	+		2188	10868	1086	1097							-0.041689106827107025
CAWDDDEEDYT	11	Unmodified	_CAWDDDEEDYT_					0	0	0			REV__tr|A0A7D6ZKB1|A0A7D6ZKB1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06715PE=4SV=1	REV__tr|A0A7D6ZKB1|A0A7D6ZKB1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06715PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2261230349541	2	681.227347	1360.44014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4569	1	9.5349	9.0349	10.035	0.077971								0	0	0	0.63775	1	3919	3919		0.30703	0.30703	1		+		2189	15675	1087	1098	2884	2884					-0.22566122676971645
CCAGCSAV	8	Unmodified	_CCAGCSAV_					0	0	0		ENST00000359680.9_1_X:13731820-13731982:-|nuORF	ENST00000359680.9_1_X:13731820-13731982:-|nuORF	ENST00000359680.9_1_X:13731820-13731982:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.1242248415947	2	357.124402	712.234252	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.047	1	27.047	26.547	27.547	0								0	0	0	1.0178	1	11308	11308		0.79363	0	1				2190	6021	1088	1099	2885	2885					-0.13337601080274908
CCASKCGS	8	Unmodified	_CCASKCGS_					0	0	0			REV__ENSG00000212658|ENST00000391353|KRTAP29-1	REV__ENSG00000212658|ENST00000391353|KRTAP29-1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	380.2284728884697	2	379.635134	757.255715	-0.34026	-0.00012918	3.7522	0.0014245	3.412	0.0012953	379.6371641087084	94.627	0.3092	94.627	94.425	94.735	0					10	9	2	0	0	0	2.3239	1	39583	39583		0	0	1	158370	+		2191	11833	1089	1100	2886	2886					-0.13262216051543874
CCCCCCCS	8	Unmodified	_CCCCCCCS_					0	0	0		nc|ENSG00000231721|A0A455ZAR2|LINC-PINT;ENST00000451786.5_1_7:130792823-130793084:-|nuORF;ENST00000531526.5_1_11:45944386-45945084:+|nuORF;ENST00000498308.1_1_7:5111775-5112846:+|nuORF	REV__nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	REV__nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	MSMS	GG20161007_CRH_Patient100_A02_01	1	414.0606872439384	2	414.060719	826.106884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.03	1	22.03	21.53	22.53	0								0	0	0	1.0178	1	9162	9162		0	0	1				2192	6613	1090	1101	2887	2887					-0.3131247260428154
CCCCCFDF	8	Unmodified	_CCCCCFDF_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.0789367556572	3	315.080696	942.220258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.704	1	56.673	56.173	57.173	1.9684								0	0	0	1.0178	1	22925	22925		0.45834	0.45834	1				2193	7774	1091	1102	2888	2888					-0.25316337895219476
CCCCCGGGG	9	Unmodified	_CCCCCGGGG_					0	0	0		nc|ENSG00000138650|Q9P2E7-2|PCDH10;ENSG00000138650|ENST00000264360|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	nc|ENSG00000138650|Q9P2E7-2|PCDH10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.7487365603447	2	381.578447	761.142342	-0.009307	-3.5514E-06	3.8238	0.0014591	3.8145	0.0014555	381.5798438368106	37.442	0.39877	38.726	38.682	39.081	1.284					29	18	2	0	0	0	0.85403	1	15702	15702		0	0	1	2328300			2194	2843	1092	1103	2889	2889					-0.24778350760584544
CCCCCSPR	8	Unmodified	_CCCCCSPR_					0	0	0			REV__ENSG00000184261|ENST00000327876|KCNK12	REV__ENSG00000184261|ENST00000327876|KCNK12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.6295959353447	2	437.628472	873.24239	0.20451	8.9498E-05	0.77975	0.00034124	0.98425	0.00043074	437.62882705045945	16.515	0.22158	16.515	16.373	16.594	0					10	6	2	0	0	0	0.89178	1	6866	6866		0.69038	0.69038	1	352510	+		2195	11417	1093	1104	2890	2890					-0.199301134268012
CCCQMKTMR	9	Unmodified	_CCCQMKTMR_					0	0	0			REV__FBN2|p.C1323Afs*9|1|0.05|ENSG00000138829|chr5:128335176-128335176|A/-|frameshift_variant	REV__FBN2|p.C1323Afs*9|1|0.05|ENSG00000138829|chr5:128335176-128335176|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	552.2159911990166	2	552.217985	1102.42142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3421	1	7.4184	6.9184	7.9184	0.07632								0	0	0	0.42693	1	3037	3037		0.52476	0.12405	1		+		2196	10088	1094	1105	2891	2891					-0.1256964885872094
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1585571169853	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.624	1	25.624	25.124	26.124	0								0	0	0	0.66264	1	10695	10695		0	0	1		+		2197	8908	1095	1106	2892	2892					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1584960818291	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.945	1	25.945	25.445	26.445	0								0	0	0	0.66264	1	10830	10830		0	0	1		+		2198	8908	1095	1106	2893	2893					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1578857302666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.13	1	26.13	25.63	26.63	0								0	0	0	0.66264	1	10909	10909		0	0	1		+		2199	8908	1095	1106	2894	2894					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1608764529228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.242	1	26.242	25.742	26.742	0								0	0	0	0.66264	1	10958	10958		0	0	1		+		2200	8908	1095	1106	2895	2895					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1617919802666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.402	1	26.402	25.902	26.902	0								0	0	0	0.66264	1	11026	11026		0	0	1		+		2201	8908	1095	1106	2896	2896					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1580078005791	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.508	1	26.508	26.008	27.008	0								0	0	0	0.66264	1	11073	11073		0	0	1		+		2202	8908	1095	1106	2897	2897					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1608154177666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.734	1	26.734	26.234	27.234	0								0	0	0	0.66264	1	11172	11172		0	0	1		+		2203	8908	1095	1106	2898	2898					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1586791872978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.864	1	26.864	26.364	27.364	0								0	0	0	0.66264	1	11229	11229		0	0	1		+		2204	8908	1095	1106	2899	2899					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1600219607353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.594	1	87.594	87.094	88.094	0								0	0	0	0.66264	1	36608	36608		0	0	1		+		2205	8908	1095	1106	2900	2900					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1586181521416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5428	1	9.6207	9.1207	10.121	0.077971								0	0	0	0.66264	1	3954	3954		0	0	1		+		2206	8908	1095	1106	2901	2901					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1592895388603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6893	1	9.7672	9.2672	10.267	0.077971								0	0	0	0.66264	1	4015	4015		0	0	1		+		2207	8908	1095	1106	2902	2902					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1590453982353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7955	1	9.8735	9.3735	10.373	0.077971								0	0	0	0.66264	1	4059	4059		0	0	1		+		2208	8908	1095	1106	2903	2903					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1570312380791	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9122	1	9.9902	9.4902	10.49	0.077971								0	0	0	0.66264	1	4108	4108		0	0	1		+		2209	8908	1095	1106	2904	2904					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581909060478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.121	1	10.199	9.6988	10.699	0.077971								0	0	0	0.66264	1	4196	4196		0	0	1		+		2210	8908	1095	1106	2905	2905					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1583129763603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.242	1	10.32	9.8196	10.82	0.077971								0	0	0	0.66264	1	4246	4246		0	0	1		+		2211	8908	1095	1106	2906	2906					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1575805544853	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.356	1	10.433	9.9335	10.933	0.077971								0	0	0	0.66264	1	4294	4294		0	0	1		+		2212	8908	1095	1106	2907	2907					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1562377810478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.488	1	10.57	10.07	11.07	0.082325								0	0	0	0.66264	1	4350	4350		0	0	1		+		2213	8908	1095	1106	2908	2908					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1576415896416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.615	1	10.697	10.197	11.197	0.082325								0	0	0	0.66264	1	4403	4403		0	0	1		+		2214	8908	1095	1106	2909	2909					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1569091677666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.725	1	10.808	10.308	11.308	0.082325								0	0	0	0.66264	1	4450	4450		0	0	1		+		2215	8908	1095	1106	2910	2910					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1579467654228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.858	1	10.941	10.441	11.441	0.082325								0	0	0	0.66264	1	4505	4505		0	0	1		+		2216	8908	1095	1106	2911	2911					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1589233279228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.97	1	11.053	10.553	11.553	0.082325								0	0	0	0.66264	1	4551	4551		0	0	1		+		2217	8908	1095	1106	2912	2912					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1578857302666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.091	1	11.173	10.673	11.673	0.082325								0	0	0	0.66264	1	4601	4601		0	0	1		+		2218	8908	1095	1106	2913	2913					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581298708916	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.19	1	11.273	10.773	11.773	0.082325								0	0	0	0.66264	1	4642	4642		0	0	1		+		2219	8908	1095	1106	2914	2914					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1595947146416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.316	1	11.398	10.898	11.898	0.082325								0	0	0	0.66264	1	4694	4694		0	0	1		+		2220	8908	1095	1106	2915	2915					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1572753787041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.448	1	11.53	11.03	12.03	0.082325								0	0	0	0.66264	1	4749	4749		0	0	1		+		2221	8908	1095	1106	2916	2916					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1570922732353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.745	1	14.858	14.358	15.358	0.11295								0	0	0	0.66264	1	6119	6119		0	0	1		+		2222	8908	1095	1106	2917	2917					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1596557497978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.899	1	15.012	14.512	15.512	0.11295								0	0	0	0.66264	1	6183	6183		0	0	1		+		2223	8908	1095	1106	2918	2918					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1600219607353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.151	1	15.264	14.764	15.764	0.11295								0	0	0	0.66264	1	6288	6288		0	0	1		+		2224	8908	1095	1106	2919	2919					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1582519412041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.283	1	15.413	14.913	15.913	0.13022								0	0	0	0.66264	1	6343	6343		0	0	1		+		2225	8908	1095	1106	2920	2920					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1578857302666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.4	1	15.53	15.03	16.03	0.13022								0	0	0	0.66264	1	6391	6391		0	0	1		+		2226	8908	1095	1106	2921	2921					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581298708916	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.529	1	15.659	15.159	16.159	0.13022								0	0	0	0.66264	1	6444	6444		0	0	1		+		2227	8908	1095	1106	2922	2922					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1578246951103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.649	1	15.78	15.28	16.28	0.13022								0	0	0	0.66264	1	6494	6494		0	0	1		+		2228	8908	1095	1106	2923	2923					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581298708916	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.777	1	15.908	15.408	16.408	0.13022								0	0	0	0.66264	1	6547	6547		0	0	1		+		2229	8908	1095	1106	2924	2924					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1573974490166	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.991	1	16.121	15.621	16.621	0.13022								0	0	0	0.66264	1	6637	6637		0	0	1		+		2230	8908	1095	1106	2925	2925					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1573364138603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.184	1	16.314	15.814	16.814	0.13022								0	0	0	0.66264	1	6718	6718		0	0	1		+		2231	8908	1095	1106	2926	2926					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1584350466728	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.287	1	16.417	15.917	16.917	0.13022								0	0	0	0.66264	1	6760	6760		0	0	1		+		2232	8908	1095	1106	2927	2927					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581909060478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.409	1	16.54	16.04	17.04	0.13022								0	0	0	0.66264	1	6810	6810		0	0	1		+		2233	8908	1095	1106	2928	2928					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1572143435478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.544	1	16.695	16.195	17.195	0.15093								0	0	0	0.66264	1	6865	6865		0	0	1		+		2234	8908	1095	1106	2929	2929					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1592895388603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.661	1	16.812	16.312	17.312	0.15093								0	0	0	0.66264	1	6913	6913		0	0	1		+		2235	8908	1095	1106	2930	2930					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1587402224541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.783	1	16.934	16.434	17.434	0.15093								0	0	0	0.66264	1	6964	6964		0	0	1		+		2236	8908	1095	1106	2931	2931					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1580078005791	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.972	1	17.123	16.623	17.623	0.15093								0	0	0	0.66264	1	7041	7041		0	0	1		+		2237	8908	1095	1106	2932	2932					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1581298708916	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.106	1	17.257	16.757	17.757	0.15093								0	0	0	0.66264	1	7095	7095		0	0	1		+		2238	8908	1095	1106	2933	2933					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597167849541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.215	1	17.366	16.866	17.866	0.15093								0	0	0	0.66264	1	7140	7140		0	0	1		+		2239	8908	1095	1106	2934	2934					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1586181521416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.337	1	17.488	16.988	17.988	0.15093								0	0	0	0.66264	1	7192	7192		0	0	1		+		2240	8908	1095	1106	2935	2935					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1576415896416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.453	1	17.604	17.104	18.104	0.15093								0	0	0	0.66264	1	7240	7240		0	0	1		+		2241	8908	1095	1106	2936	2936					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1567870974541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.577	1	17.728	17.228	18.228	0.15093								0	0	0	0.66264	1	7293	7293		0	0	1		+		2242	8908	1095	1106	2937	2937					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1584350466728	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.754	1	17.927	17.427	18.427	0.17285								0	0	0	0.66264	1	7369	7369		0	0	1		+		2243	8908	1095	1106	2938	2938					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1588622927666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.879	1	18.052	17.552	18.552	0.17285								0	0	0	0.66264	1	7421	7421		0	0	1		+		2244	8908	1095	1106	2939	2939					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1584960818291	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.033	1	18.206	17.706	18.706	0.17285								0	0	0	0.66264	1	7484	7484		0	0	1		+		2245	8908	1095	1106	2940	2940					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1559936404228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.143	1	18.316	17.816	18.816	0.17285								0	0	0	0.66264	1	7530	7530		0	0	1		+		2246	8908	1095	1106	2941	2941					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1566650271416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.272	1	18.445	17.945	18.945	0.17285								0	0	0	0.66264	1	7584	7584		0	0	1		+		2247	8908	1095	1106	2942	2942					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1579467654228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.138	1	29.417	28.917	29.917	0.2793								0	0	0	0.66264	1	12195	12195		0	0	1		+		2248	8908	1095	1106	2943	2943					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1587402224541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.381	1	29.66	29.16	30.16	0.2793								0	0	0	0.66264	1	12300	12300		0	0	1		+		2249	8908	1095	1106	2944	2944					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1580688357353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.527	1	29.807	29.307	30.307	0.2793								0	0	0	0.66264	1	12363	12363		0	0	1		+		2250	8908	1095	1106	2945	2945					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1593505740166	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.685	1	29.97	29.47	30.47	0.28442								0	0	0	0.66264	1	12430	12430		0	0	1		+		2251	8908	1095	1106	2946	2946					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1579467654228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.833	1	30.119	29.619	30.619	0.2859								0	0	0	0.66264	1	12493	12493		0	0	1		+		2252	8908	1095	1106	2947	2947					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1590453982353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.046	1	30.332	29.832	30.832	0.2859								0	0	0	0.66264	1	12586	12586		0	0	1		+		2253	8908	1095	1106	2948	2948					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597778201103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.189	1	30.475	29.975	30.975	0.2859								0	0	0	0.66264	1	12650	12650		0	0	1		+		2254	8908	1095	1106	2949	2949					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1603271365166	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.302	1	30.588	30.088	31.088	0.2859								0	0	0	0.66264	1	12700	12700		0	0	1		+		2255	8908	1095	1106	2950	2950					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597778201103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.653	1	30.939	30.439	31.439	0.2859								0	0	0	0.66264	1	12855	12855		0	0	1		+		2256	8908	1095	1106	2951	2951					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1592285037041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.77	1	31.056	30.556	31.556	0.2859								0	0	0	0.66264	1	12907	12907		0	0	1		+		2257	8908	1095	1106	2952	2952					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1571533083916	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.924	1	31.215	30.715	31.715	0.29086								0	0	0	0.66264	1	12974	12974		0	0	1		+		2258	8908	1095	1106	2953	2953					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1588622927666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.036	1	31.327	30.827	31.827	0.29086								0	0	0	0.66264	1	13023	13023		0	0	1		+		2259	8908	1095	1106	2954	2954					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1577026247978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.154	1	31.445	30.945	31.945	0.29086								0	0	0	0.66264	1	13075	13075		0	0	1		+		2260	8908	1095	1106	2955	2955					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1577636599541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.285	1	31.575	31.075	32.075	0.29086								0	0	0	0.66264	1	13131	13131		0	0	1		+		2261	8908	1095	1106	2956	2956					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1588012576103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.399	1	31.69	31.19	32.19	0.29086								0	0	0	0.66264	1	13180	13180		0	0	1		+		2262	8908	1095	1106	2957	2957					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1589233279228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.531	1	31.822	31.322	32.322	0.29086								0	0	0	0.66264	1	13235	13235		0	0	1		+		2263	8908	1095	1106	2958	2958					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1583129763603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.836	1	43.156	42.656	43.656	0.32058								0	0	0	0.66264	1	17992	17992		0	0	1		+		2264	8908	1095	1106	2959	2959					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1603271365166	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.938	1	43.262	42.762	43.762	0.32389								0	0	0	0.66264	1	18035	18035		0	0	1		+		2265	8908	1095	1106	2960	2960					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1584960818291	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.37	1	45.699	45.199	46.199	0.32899								0	0	0	0.66264	1	19048	19048		0	0	1		+		2266	8908	1095	1106	2961	2961					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1603271365166	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.493	1	45.822	45.322	46.322	0.32899								0	0	0	0.66264	1	19098	19098		0	0	1		+		2267	8908	1095	1106	2962	2962					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1589843630791	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.6	1	45.929	45.429	46.429	0.32899								0	0	0	0.66264	1	19143	19143		0	0	1		+		2268	8908	1095	1106	2963	2963					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1577026247978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.724	1	46.053	45.553	46.553	0.32899								0	0	0	0.66264	1	19193	19193		0	0	1		+		2269	8908	1095	1106	2964	2964					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1589233279228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.883	1	46.212	45.712	46.712	0.32899								0	0	0	0.66264	1	19258	19258		0	0	1		+		2270	8908	1095	1106	2965	2965					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597167849541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.006	1	46.335	45.835	46.835	0.32899								0	0	0	0.66264	1	19309	19309		0	0	1		+		2271	8908	1095	1106	2966	2966					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1578246951103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.127	1	46.456	45.956	46.956	0.32899								0	0	0	0.66264	1	19358	19358		0	0	1		+		2272	8908	1095	1106	2967	2967					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1602661013603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.233	1	46.562	46.062	47.062	0.32899								0	0	0	0.66264	1	19402	19402		0	0	1		+		2273	8908	1095	1106	2968	2968					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1611205935478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.353	1	46.682	46.182	47.182	0.32899								0	0	0	0.66264	1	19450	19450		0	0	1		+		2274	8908	1095	1106	2969	2969					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1591674685478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.331	1	56.652	56.152	57.152	0.32103								0	0	0	0.66264	1	23608	23608		0	0	1		+		2275	8908	1095	1106	2970	2970					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597167849541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.563	1	56.884	56.384	57.384	0.32103								0	0	0	0.66264	1	23713	23713		0	0	1		+		2276	8908	1095	1106	2971	2971					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1609985232353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.773	1	57.094	56.594	57.594	0.32103								0	0	0	0.66264	1	23805	23805		0	0	1		+		2277	8908	1095	1106	2972	2972					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1583129763603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.067	1	60.395	59.895	60.895	0.32809								0	0	0	0.66264	1	25173	25173		0	0	1		+		2278	8908	1095	1106	2973	2973					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1591674685478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.175	1	60.504	60.004	61.004	0.32809								0	0	0	0.66264	1	25219	25219		0	0	1		+		2279	8908	1095	1106	2974	2974					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1592285037041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.19	1	84.45	83.95	84.95	0.26083								0	0	0	0.66264	1	35213	35213		0	0	1		+		2280	8908	1095	1106	2975	2975					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1590453982353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.511	1	84.772	84.272	85.272	0.26083								0	0	0	0.66264	1	35343	35343		0	0	1		+		2281	8908	1095	1106	2976	2976					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1587402224541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.667	1	84.927	84.427	85.427	0.26083								0	0	0	0.66264	1	35406	35406		0	0	1		+		2282	8908	1095	1106	2977	2977					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1598998904228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.465	1	94.61	94.11	95.11	0.14493								0	0	0	0.66264	1	39537	39537		0	0	1		+		2283	8908	1095	1106	2978	2978					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1605102419853	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.786	1	94.909	94.409	95.409	0.12331								0	0	0	0.66264	1	39666	39666		0	0	1		+		2284	8908	1095	1106	2979	2979					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1597778201103	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.001	1	95.124	94.624	95.624	0.12331								0	0	0	0.66264	1	39755	39755		0	0	1		+		2285	8908	1095	1106	2980	2980					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1582519412041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.197	1	12.891	12.391	13.391	0.69396								0	0	0	0.66264	1	5067	5067		0	0	1		+		2286	8908	1095	1106	2981	2981					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1589233279228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.379	1	13.073	12.573	13.573	0.69396								0	0	0	0.66264	1	5142	5142		0	0	1		+		2287	8908	1095	1106	2982	2982					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1567870974541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.505	1	13.199	12.699	13.699	0.69396								0	0	0	0.66264	1	5194	5194		0	0	1		+		2288	8908	1095	1106	2983	2983					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1572143435478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.632	1	13.326	12.826	13.826	0.69396								0	0	0	0.66264	1	5246	5246		0	0	1		+		2289	8908	1095	1106	2984	2984					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1596557497978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.79	1	13.484	12.984	13.984	0.69396								0	0	0	0.66264	1	5311	5311		0	0	1		+		2290	8908	1095	1106	2985	2985					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1586791872978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.028	1	13.755	13.255	14.255	0.72639								0	0	0	0.66264	1	5409	5409		0	0	1		+		2291	8908	1095	1106	2986	2986					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1562988162041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.154	1	13.88	13.38	14.38	0.72639								0	0	0	0.66264	1	5462	5462		0	0	1		+		2292	8908	1095	1106	2987	2987					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1582519412041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.276	1	14.002	13.502	14.502	0.72639								0	0	0	0.66264	1	5512	5512		0	0	1		+		2293	8908	1095	1106	2988	2988					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1586791872978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.51	1	14.237	13.737	14.737	0.72639								0	0	0	0.66264	1	5610	5610		0	0	1		+		2294	8908	1095	1106	2989	2989					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1581909060478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.688	1	14.414	13.914	14.914	0.72639								0	0	0	0.66264	1	5684	5684		0	0	1		+		2295	8908	1095	1106	2990	2990					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1579467654228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.003	1	14.73	14.23	15.23	0.72639								0	0	0	0.66264	1	5817	5817		0	0	1		+		2296	8908	1095	1106	2991	2991					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1576415896416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.548	1	37.824	37.324	38.324	1.2762								0	0	0	0.66264	1	15342	15342		0	0	1		+		2297	8908	1095	1106	2992	2992					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1584350466728	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4138	1	2.1622	1.6622	2.6622	0.7484								0	0	0	0.66264	1	584	584		0	0	1		+		2298	8908	1095	1106	2993	2993					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1586181521416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5629	1	2.3113	1.8113	2.8113	0.7484								0	0	0	0.66264	1	647	647		0	0	1		+		2299	8908	1095	1106	2994	2994					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1585571169853	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6912	1	2.4396	1.9396	2.9396	0.7484								0	0	0	0.66264	1	700	700		0	0	1		+		2300	8908	1095	1106	2995	2995					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1576415896416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8197	1	2.5681	2.0681	3.0681	0.7484								0	0	0	0.66264	1	754	754		0	0	1		+		2301	8908	1095	1106	2996	2996					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1588622927666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.634	1	11.395	10.895	11.895	0.76165								0	0	0	0.66264	1	4420	4420		0	0	1		+		2302	8908	1095	1106	2997	2997					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1564819216728	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.74	1	11.502	11.002	12.002	0.76165								0	0	0	0.66264	1	4464	4464		0	0	1		+		2303	8908	1095	1106	2998	2998					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1569702029228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.857	1	11.619	11.119	12.119	0.76165								0	0	0	0.66264	1	4512	4512		0	0	1		+		2304	8908	1095	1106	2999	2999					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1566650271416	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.973	1	11.735	11.235	12.235	0.76165								0	0	0	0.66264	1	4560	4560		0	0	1		+		2305	8908	1095	1106	3000	3000					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1572143435478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.1	1	11.862	11.362	12.362	0.76165								0	0	0	0.66264	1	4612	4612		0	0	1		+		2306	8908	1095	1106	3001	3001					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1578857302666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.215	1	11.977	11.477	12.477	0.76165								0	0	0	0.66264	1	4659	4659		0	0	1		+		2307	8908	1095	1106	3002	3002					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1597167849541	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.372	1	12.134	11.634	12.634	0.76165								0	0	0	0.66264	1	4723	4723		0	0	1		+		2308	8908	1095	1106	3003	3003					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1592285037041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.62	1	12.381	11.881	12.881	0.76165								0	0	0	0.66264	1	4824	4824		0	0	1		+		2309	8908	1095	1106	3004	3004					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1578857302666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.844	1	12.632	12.132	13.132	0.78751								0	0	0	0.66264	1	4918	4918		0	0	1		+		2310	8908	1095	1106	3005	3005					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1586791872978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.945	1	16.984	16.484	17.484	1.0392								0	0	0	0.66264	1	6618	6618		0	0	1		+		2311	8908	1095	1106	3006	3006					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1583129763603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.055	1	17.094	16.594	17.594	1.0392								0	0	0	0.66264	1	6663	6663		0	0	1		+		2312	8908	1095	1106	3007	3007					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1579467654228	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.808	1	32.623	32.123	33.123	1.8151								0	0	0	0.66264	1	12914	12914		0	0	1		+		2313	8908	1095	1106	3008	3008					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1592285037041	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.925	1	32.74	32.24	33.24	1.8151								0	0	0	0.66264	1	12963	12963		0	0	1		+		2314	8908	1095	1106	3009	3009					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1590453982353	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.042	1	32.867	32.367	33.367	1.8246								0	0	0	0.66264	1	13012	13012		0	0	1		+		2315	8908	1095	1106	3010	3010					-0.2807754978982757
CCCWCFCCTN	10	Unmodified	_CCCWCFCCTN_					0	0	0			REV__ENSG00000091844|ENST00000206262|RGS17	REV__ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.1592895388603	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.596	1	40.433	39.933	40.933	1.8366								0	0	0	0.66264	1	16189	16189		0	0	1		+		2316	8908	1095	1106	3011	3011					-0.2807754978982757
CCDGDDFD	8	Unmodified	_CCDGDDFD_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1199828982353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5203	1	6.1416	5.6416	6.6416	0.62127								0	0	0	1.0178	1	2279	2279		0.79363	0	1		+		2317	9469	1096	1107	3012	3012					-0.22200081866844812
CCDGDDFD	8	Unmodified	_CCDGDDFD_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1198303103447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7262	1	6.3475	5.8475	6.8475	0.62127								0	0	0	1.0178	1	2364	2364		0.79363	0	1		+		2318	9469	1096	1107	3013	3013					-0.22200081866844812
CCEWCKRF	8	Unmodified	_CCEWCKRF_					0	0	0		ENST00000486255.1_1_X:151123175-151124345:-|nuORF;ENSG00000102287|ENST00000370328|GABRE	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7204467654228	2	537.719533	1073.42451	2.6262	0.0014121	-2.0971	-0.0011276	0.52909	0.0002845	537.719387474894	65.622	0.72926	67.021	66.788	67.517	1.3989					95	23	7	0	0	0	0.87935	1	27590	27590		9.3474	0.75416	1	11910000			2319	1385	1097	1108	3014	3014					-0.10926314418043148
CCEWCKRFK	9	Unmodified	_CCEWCKRFK_					0	0	0		ENST00000486255.1_1_X:151123175-151124345:-|nuORF;ENSG00000102287|ENST00000370328|GABRE	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	ENST00000486255.1_1_X:151123175-151124345:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1805908083916	3	401.513768	1201.51948	-1.0476	-0.00042063	-1.0751	-0.00043166	-2.1227	-0.00085229	401.51376936115895	11.618	1.0171	11.618	11.016	12.034	0					45	32	2	0	0	0	0.11901	1	4882	4882		2.7352	1.7729	1	928960			2320	1385	1098	1109	3015	3015					-0.07322380946857265
CCFSEEVT	8	Unmodified	_CCFSEEVT_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1728698611259	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.648	1	83.648	83.148	84.148	0								0	0	0	1.0178	1	34857	34857		0.69038	0.088878	1				2321	1355	1099	1110	3016	3016					-0.13085755039321612
CCFSEEVT	8	Unmodified	_CCFSEEVT_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1725341677666	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.868	1	83.868	83.368	84.368	0								0	0	0	1.0178	1	34948	34948		0.69038	0.088878	1				2322	1355	1099	1110	3017	3017					-0.13085755039321612
CCFWKTEVLV	10	Unmodified	_CCFWKTEVLV_					0	0	0		GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant;ENSG00000169347|ENST00000302555|GP2;nc|ENSG00000169347|P55259|GP2	GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.8667480349541	3	409.868205	1226.58279	1.2392	0.00050789	-4.0821	-0.0016731	-2.8429	-0.0011652	409.86627846036464	48.434	0.24536	49.822	49.65	49.895	1.388					12	7	2	0	0	0	0.85617	1	20267	20267		6.1918	0.78914	1	545510			2323	4084	1100	1111	3018	3018					-0.021441169579702546
CCGESTST	8	Unmodified	_CCGESTST_					0	0	0		chr1:156277241-156277967|117|16.41|0.53|4.96|-|1|SMG5,None|1	chr1:156277241-156277967|117|16.41|0.53|4.96|-|1|SMG5,None|1	chr1:156277241-156277967|117|16.41|0.53|4.96|-|1|SMG5,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.1350585818291	2	394.133479	786.252404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.43	1	111.59	111.09	112.09	0.16445								0	0	0	1.0178	1	48360	48360		2.3027	1.5091	1				2324	162	1101	1112	3019	3019					-0.14927187624562066
CCGGGYPL	8	Unmodified	_CCGGGYPL_					0	0	0			REV__ENST00000360467.5_1_13:110960233-110960438:+|nuORF	REV__ENST00000360467.5_1_13:110960233-110960438:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1532165408134	2	385.154017	768.293481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.672	1	21.797	21.297	22.297	1.1254								0	0	0	1.0178	1	8618	8618		2.8892	2.0956	1		+		2325	12593	1102	1113	3020	3020					-0.09993381794436118
CCGGGYPL	8	Unmodified	_CCGGGYPL_					0	0	0			REV__ENST00000360467.5_1_13:110960233-110960438:+|nuORF	REV__ENST00000360467.5_1_13:110960233-110960438:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1541931033134	2	385.154017	768.293481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.343	1	78.624	78.124	79.124	1.2809								0	0	0	1.0178	1	32464	32464		0.79363	0	1		+		2326	12593	1102	1113	3021	3021					-0.09993381794436118
CCLPPLLPV	9	Unmodified	_CCLPPLLPV_					0	0	0		ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7627136111259	2	477.761192	953.507831	3.5149	0.0016793	-3.4863	-0.0016656	0.028607	1.3667E-05	477.75998115523777	85.667	0.76757	87.214	86.722	87.49	1.547					42	31	2	0	0	0	0.39097	1	36038	36038		20.871	3.9289	1	6794100			2327	7398	1103	1114	3022	3022					0.02921745301455303
CCLPPLLPV	9	Unmodified	_CCLPPLLPV_					0	0	0		ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	477.761192	953.507831	3.3073	0.0015801	-2.9988	-0.0014327	0.30851	0.00014739	477.7601436992466	86.206	0.52887	87.333	86.91	87.439	1.1265	0.059148	0.00023269	NaN	20.871	25	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6640500			2328	7398	1103	1114							0.02921745301455303
CCLPPLLPV	9	Unmodified	_CCLPPLLPV_					0	0	0		ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	ENST00000572330.5_1_17:4736842-4793277:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	477.761192	953.507831	3.5149	0.0016793	-3.4863	-0.0016656	0.028607	1.3667E-05	477.75998115523777	85.667	0.76757	87.214	86.722	87.49	1.547	-0.059148	-0.00023309	NaN	20.871	42	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6794100			2329	7398	1103	1114							0.02921745301455303
CCPHGSDG	8	Unmodified	_CCPHGSDG_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|188|1|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|188|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1277648806572	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.567	1	22.8	22.3	23.3	0.23306								0	0	0	1.0178	1	9404	9404		0.69038	0.69038	1		+		2330	14256	1104	1115	3023	3023					-0.15364330839281592
CCQGGKSS	8	Unmodified	_CCQGGKSS_					0	0	0		chr20:43687072-43699757|145|15.3|0.04|8.76|+|2|MYBL2,MYBL2|1	chr20:43687072-43699757|145|15.3|0.04|8.76|+|2|MYBL2,MYBL2|1	chr20:43687072-43699757|145|15.3|0.04|8.76|+|2|MYBL2,MYBL2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1531860232353	2	385.152006	768.289458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.24	1	103.41	102.91	103.91	0.16445								0	0	0	1.0178	1	43501	43501		0.69038	0.69038	1				2331	247	1105	1116	3024	3024					-0.10395471288143199
CCQPFLWI	8	Unmodified	_CCQPFLWI_					0	0	0		ENST00000575310.1_1_17:7346921-7347071:+|nuORF	ENST00000575310.1_1_17:7346921-7347071:+|nuORF	ENST00000575310.1_1_17:7346921-7347071:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1590759158134	3	337.15932	1008.45613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.311	1	87.311	86.811	87.811	0								0	0	0	1.0178	1	36476	36476		1.8442	0	1				2332	7409	1106	1117	3025	3025					-0.04775998392437941
CCRNMCEEPE	10	Unmodified	_CCRNMCEEPE_					0	0	0			REV__ENSG00000148848|ENST00000448723|ADAM12	REV__ENSG00000148848|ENST00000448723|ADAM12	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2098266482353	2	607.208869	1212.40318	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.943	1	22.068	21.568	22.568	1.1254								0	0	0	0.66237	1	8735	8735		0.45834	0	1		+		2333	10357	1107	1118	3026	3026					-0.19452112299700275
CCSSSHFV	8	Unmodified	_CCSSSHFV_					0	0	0			REV__ENST00000273375.7_1_3:120408429-120408636:-|nuORF	REV__ENST00000273375.7_1_3:120408429-120408636:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	435.1662475466728	2	435.167656	868.320759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.604	1	97.604	97.104	98.104	0								0	0	0	1.0178	1	40807	40807		0.79363	0.19213	1		+		2334	12241	1108	1119	3027	3027					-0.11866898254049829
CCSTNEDTS	9	Unmodified	_CCSTNEDTS_					0	0	0		tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	480.1579162478447	2	480.157682	958.300811	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.24	1	107.4	106.9	107.9	0.15795								0	0	0	0.40883	1	46025	46025		7.9102	5.3327	1				2335	16563	1109	1120	3028	3028					-0.18000738775333502
CCSYSMTSSC	10	Unmodified	_CCSYSMTSSC_					0	0	0			REV__CON__Q8IUT8	REV__CON__Q8IUT8	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1630126833916	2	536.166138	1070.31772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.683	1	15.813	15.313	16.313	0.13022								0	0	0	0.66264	1	6508	6508		0	0	1		+	+	2336	8396	1110	1121	3029	3029					-0.21462277485375125
CCSYSMTSSC	10	Unmodified	_CCSYSMTSSC_					0	0	0			REV__CON__Q8IUT8	REV__CON__Q8IUT8	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1667358279228	2	536.166138	1070.31772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.459	1	43.783	43.283	44.283	0.32389								0	0	0	0.66264	1	18246	18246		0	0	1		+	+	2337	8396	1110	1121	3030	3030					-0.21462277485375125
CCTESLVNR	9	2 Carbamidomethyl (C)	_C(Carbamidomethyl (C))C(Carbamidomethyl (C))TESLVNR_	C(1)C(1)TESLVNR		C(42)C(42)TESLVNR		0	2	0		CON__P02769;ALB|p.K499I|1|0.35|ENSG00000163631|chr4:73418155-73418155|A/T|missense_variant;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.7534057497978	2	569.752615	1137.49068	0.23017	0.00013114	1.148	0.00065408	1.3782	0.00078522	569.7533978776567	14.765	0.15113	15.662	15.558	15.709	0.89664					7	4	2	0	0	0	0.12216	1	6128	6128		41.956	25.013	1	609910		+	2338	341;340	1111	1122	3031	3031	0;1				-0.07256827042306213
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.8003417849541	2	677.799565	1353.58458	1.3407	0.00090874	-0.90366	-0.0006125	0.43707	0.00029624	677.799128188088	26.216	0.60079	26.216	26.026	26.627	0					44	19	3	0	0	0	0.7888	1	10986	10986		15.739	1.3332	1	1899700			2339	954	1112	1123	3032	3032					-0.07807107940038804
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2027465701103	3	452.202136	1353.58458	1.064	0.00048115	0.4761	0.00021529	1.5401	0.00069645	452.2024766824002	26.216	1.9958	26.216	25.718	27.714	0					171	65	5	0	0	0	0.66268	3	11004	11004;11164;11519		11.631	0	1	14671000			2340	954	1112	1123	3033;3034;3035	3033					-0.07807107940038804
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2026550173759	3	452.202136	1353.58458	1.4627	0.00066144	-0.31882	-0.00014417	1.1439	0.00051727	452.20206404387045	25.867	0.66748	26.119	25.827	26.495	0.25197					54	21	4	0	0	0	0.66268	1	10784	10784		11.631	0	1	9057100			2341	954	1112	1123	3036	3036					-0.07807107940038804
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2025634646416	3	452.202136	1353.58458	1.5956	0.00072152	-1.1477	-0.00051901	0.44782	0.00020251	452.2014864582493	24.69	0.41381	25.931	25.763	26.177	1.241					34	13	3	0	0	0	0.89436	1	10307	10307		5.5233	0	1	4407500			2342	954	1112	1123	3037	3037					-0.07807107940038804
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	678.3024169802666	2	677.799565	1353.58458	1.1139	0.00075502	-2.4166	-0.001638	-1.3027	-0.00088296	677.7973725750958	24.696	0.23296	25.937	25.823	26.056	1.241					11	7	2	0	0	0	0.89436	1	10324	10324		10.151	4.4187	1	615530			2343	954	1112	1123	3038	3038					-0.07807107940038804
CCVIHQDDFFK	11	Unmodified	_CCVIHQDDFFK_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2024413943291	3	452.202136	1353.58458	0.78769	0.00035619	-1.2758	-0.00057693	-0.48813	-0.00022073	452.20108261595936	24.36	0.54684	26.044	25.722	26.269	1.6845					41	18	4	0	0	0	0.89436	1	10153	10153		5.5233	0	1	2449300			2344	954	1112	1123	3039	3039					-0.07807107940038804
CCWCTEELL	9	Unmodified	_CCWCTEELL_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.2169067263603	2	550.216488	1098.41842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.423	1	86.667	86.167	87.167	0.24387								0	0	0	0.42693	1	36144	36144		2.3027	0	1				2345	7776	1113	1124	3040	3040					-0.12684877440210585
CCWCTEELL	9	Unmodified	_CCWCTEELL_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.2186157107353	2	550.216488	1098.41842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.355	1	90.564	90.064	91.064	0.20904								0	0	0	0.42693	1	37861	37861		2.3027	0.4585	1				2346	7776	1113	1124	3041	3041					-0.12684877440210585
CCWCTEELL	9	Unmodified	_CCWCTEELL_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	550.2156249880791	2	550.216488	1098.41842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.544	1	79.296	78.796	79.796	1.7514								0	0	0	0.42693	1	32519	32519		2.3027	0	1				2347	7776	1113	1124	3042	3042					-0.12684877440210585
CCWGSQHP	8	Unmodified	_CCWGSQHP_					0	0	0			REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	REV__ENST00000536792.5_1_13:26828364-26828673:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1722900271416	2	459.173272	916.331992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.459	1	81.459	80.959	81.959	0								0	0	0	1.0178	1	33924	33924		0.69038	0.69038	1		+		2348	13756	1114	1125	3043	3043					-0.1295207615991103
CCYCCPCCC	9	Unmodified	_CCYCCPCCC_					0	0	0			REV__ENST00000346964.6_2_3:196770181-196770280:-|nuORF	REV__ENST00000346964.6_2_3:196770181-196770280:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.0345336794853	3	334.070926	999.190948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.743	1	18.743	18.243	19.243	0								0	0	0	0.42693	1	7791	7791		0	0	1		+		2349	12525	1115	1126	3044	3044					-0.30867941507381147
CCYCCPCCC	9	Unmodified	_CCYCCPCCC_					0	0	0			REV__ENST00000346964.6_2_3:196770181-196770280:-|nuORF	REV__ENST00000346964.6_2_3:196770181-196770280:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.0311157107353	3	334.070926	999.190948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.872	1	18.872	18.372	19.372	0								0	0	0	0.42693	1	7843	7843		0	0	1		+		2350	12525	1115	1126	3045	3045					-0.30867941507381147
CCYELFRDR	9	Unmodified	_CCYELFRDR_					0	0	0		ENST00000523094.5_2_5:157244519-157285978:-|nuORF;ENST00000523908.5_1_5:157244516-157286120:-|nuORF	ENST00000523094.5_2_5:157244519-157285978:-|nuORF	ENST00000523094.5_2_5:157244519-157285978:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1797057986259	3	402.179443	1203.5165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4992	1	7.5755	7.0755	8.0755	0.07632								0	0	0	0.42693	1	3102	3102		0.26902	0	1				2351	7096	1116	1127	3046	3046					-0.07711932800020804
CCYYERKPKI	10	Unmodified	_CCYYERKPKI_					0	0	0			REV__ENST00000454158.6_1_4:37614769-37614952:-|nuORF	REV__ENST00000454158.6_1_4:37614769-37614952:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8822204470634	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.693	1	8.3201	7.8201	8.8201	0.62713								0	0	0	0.66254	1	3184	3184		0.15932	0.15932	1		+		2352	13154	1117	1128	3047	3047					-0.012699271806923207
CDAPYGAPSA	10	Unmodified	_CDAPYGAPSA_					0	0	0		ENSG00000112559|ENST00000230321|MDFI	ENSG00000112559|ENST00000230321|MDFI	ENSG00000112559|ENST00000230321|MDFI	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1994201540947	2	476.197467	950.380382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.841	1	71.679	71.179	72.179	1.8378								0	0	0	0.66052	1	29302	29302		3.5965	1.019	1				2353	1787	1118	1129	3048	3048					-0.09679304039025283
CDAPYGAPSA	10	Unmodified	_CDAPYGAPSA_					0	0	0		ENSG00000112559|ENST00000230321|MDFI	ENSG00000112559|ENST00000230321|MDFI	ENSG00000112559|ENST00000230321|MDFI	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1996337771416	2	476.197467	950.380382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.018	1	72.841	72.341	73.341	1.824								0	0	0	0.66052	1	29796	29796		3.5965	1.019	1				2354	1787	1118	1129	3049	3049					-0.09679304039025283
CDCDEGMEV	9	Unmodified	_CDCDEGMEV_					0	0	0			REV__ENST00000520448.5_1_8:24181385-24209525:+|nuORF	REV__ENST00000520448.5_1_8:24181385-24209525:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1071655154228	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1035	1	9.1798	8.6798	9.6798	0.07632								0	0	0	0.42693	1	3771	3771		0.26902	0.26902	1		+		2355	8079	1119	1130	3050	3050					-0.20130910504633448
CDCPSPEES	9	Unmodified	_CDCPSPEES_					0	0	0			REV__ZNF70|p.I107V|1|0.05|ENSG00000187792|chr22:23744822-23744822|T/C|missense_variant	REV__ZNF70|p.I107V|1|0.05|ENSG00000187792|chr22:23744822-23744822|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	322.1503478884697	3	322.777492	965.310647	1.2268	0.00039597	-1.3068	-0.0004218	-0.080014	-2.5827E-05	322.7767019663869	62.349	0.15286	62.679	62.604	62.757	0.32974					5	4	2	0	0	0	0.11954	1	26128	26128		0.26902	0.26902	1	140730	+		2356	11553	1120	1131	3051	3051					-0.1733955076995244
CDCSESEHR	9	Unmodified	_CDCSESEHR_					0	0	0			REV__TUBB1|p.E157Rfs*38|1|0.12|ENSG00000101162|chr20:59023895-59023896|-/C|frameshift_variant	REV__TUBB1|p.E157Rfs*38|1|0.12|ENSG00000101162|chr20:59023895-59023896|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1915771365166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.562	1	40.398	39.898	40.898	1.8366								0	0	0	0.42693	1	16175	16175		1.6526	0.96225	1		+		2357	9025	1121	1132	3052	3052					-0.16446538898526342
CDEEQDCR	8	Unmodified	_CDEEQDCR_					0	0	0			REV__nc|ENSG00000197558|A2VEC9-2|SSPOP;REV__nc|ENSG00000197558|A2VEC9|SSPOP	REV__nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	GG20161007_CRH_Patient100_W632_01	3	333.1150695681572	3	333.116508	996.327694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.903	1	18.882	18.382	19.382	0.97922								0	0	0	1.0178	1	7453	7453		0.40072	0	1		+		2358	14522;14523	1122	1133	3053	3053					-0.1706163016415303
CDFCFSGLGK	10	Unmodified	_CDFCFSGLGK_					0	0	0		ENST00000491816.1_1_1:226549163-226549875:-|nuORF	ENST00000491816.1_1_1:226549163-226549875:-|nuORF	ENST00000491816.1_1_1:226549163-226549875:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4894286990166	3	359.489506	1075.44669	-1.0283	-0.00036965	0.86689	0.00031164	-0.16138	-5.8014E-05	359.48979282824223	15.308	0.30932	16.134	15.921	16.231	0.82643					14	9	2	0	0	0	0.88314	1	6368	6368		1.5923	0	1	277780			2359	6915	1123	1134	3054	3054					-0.08801811468606502
CDHCFVHG	8	Unmodified	_CDHCFVHG_					0	0	0			REV__ENSG00000189051|ENST00000399398|RNF222	REV__ENSG00000189051|ENST00000399398|RNF222	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1748840212822	2	459.173272	916.331992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.09	1	103.25	102.75	103.75	0.16445								0	0	0	1.0178	1	43430	43430		0.79363	0.10326	1		+		2360	11601	1124	1135	3055	3055					-0.1295207615991103
CDHCFVHG	8	Unmodified	_CDHCFVHG_					0	0	0			REV__ENSG00000189051|ENST00000399398|RNF222	REV__ENSG00000189051|ENST00000399398|RNF222	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1729003787041	2	459.173272	916.331992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.28	1	103.44	102.94	103.94	0.16445								0	0	0	1.0178	1	43515	43515		0.79363	0.79363	1		+		2361	11601	1124	1135	3056	3056					-0.1295207615991103
CDHCFVHG	8	Unmodified	_CDHCFVHG_					0	0	0			REV__ENSG00000189051|ENST00000399398|RNF222	REV__ENSG00000189051|ENST00000399398|RNF222	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1751891970634	2	459.173272	916.331992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.99	1	103.17	102.67	103.67	0.18066								0	0	0	1.0178	1	43341	43341		0.79363	0.79363	1		+		2362	11601	1124	1135	3057	3057					-0.1295207615991103
CDHCFVHG	8	Unmodified	_CDHCFVHG_					0	0	0			REV__ENSG00000189051|ENST00000399398|RNF222	REV__ENSG00000189051|ENST00000399398|RNF222	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1738769412041	2	459.173272	916.331992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.23	1	103.41	102.91	103.91	0.18066								0	0	0	1.0178	1	43445	43445		2.5775	1.7838	1		+		2363	11601	1124	1135	3058	3058					-0.1295207615991103
CDLKKKPRKGK	11	Unmodified	_CDLKKKPRKGK_					0	0	0		ENSG00000106341|ENST00000342032|PPP1R17	ENSG00000106341|ENST00000342032|PPP1R17	ENSG00000106341|ENST00000342032|PPP1R17	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2691833376884	3	434.26758	1299.78091	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.092	1	81.383	80.883	81.883	0.29056								0	0	0	0.63775	1	33900	33900		1.3296	0.55311	1				2364	1566	1125	1136	3059	3059					0.1430106501602495
CDSFARDTL	9	Unmodified	_CDSFARDTL_					0	0	0			REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2306396365166	2	514.229299	1026.44404	2.0444	0.0010513	0.38448	0.00019771	2.4289	0.001249	514.2292914011878	74.189	0.25557	74.189	74.047	74.302	0					13	7	2	0	0	0	0.68551	1	30901	30901		7.9102	1.5561	1	626530	+		2365	12285	1126	1137	3060	3060					-0.0681194360192876
CDSFARDTL	9	Unmodified	_CDSFARDTL_					0	0	0			REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	514.229299	1026.44404	2.0444	0.0010513	0.38448	0.00019771	2.4289	0.001249	514.2292914011878	74.189	0.25557	74.189	74.047	74.302	0	0.022883	-0.00082341	NaN	7.9102	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	626530	+		2366	12285	1126	1137							-0.0681194360192876
CDSFARDTL	9	Unmodified	_CDSFARDTL_					0	0	0			REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	REV__ENST00000293883.8_3_16:739938-740058:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.229299	1026.44404	3.0111	0.0015484	2.3744	0.001221	5.3854	0.0027693	514.2308365019578	72.386	0.36944	74.196	73.952	74.321	1.8101	0.030172	0.0012231	NaN	7.9102	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211000	+		2367	12285	1126	1137							-0.0681194360192876
CDTGECYCE	9	Unmodified	_CDTGECYCE_					0	0	0		ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	ENSG00000120332|ENST00000239462|TNN	MSMS	GG20161007_CRH_Patient100_A02_01	1	511.6485168337822	2	511.648636	1021.28272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.374	1	98.374	97.874	98.874	0								0	0	0	0.42693	1	41135	41135		0	0	1				2368	2100	1127	1138	3061	3061					-0.2270719702170254
CDWWDEGK	8	Unmodified	_CDWWDEGK_					0	0	0		ENST00000519690.1_1_5:149826472-149826517:-|nuORF	ENST00000519690.1_1_5:149826472-149826517:-|nuORF	ENST00000519690.1_1_5:149826472-149826517:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.7023803591728	2	519.702917	1037.39128	1.5001	0.00077962	-2.43	-0.0012629	-0.92993	-0.00048329	519.7018558558392	29.7	0.40133	29.7	29.484	29.885	0					40	12	6	0	0	0	0.89051	1	12475	12475		2.3027	0.65011	1	3166600			2369	7073	1128	1139	3062	3062					-0.1259190166474582
CDYYYHCYHWA	11	Unmodified	_CDYYYHCYHWA_					0	0	0			REV__ENST00000586479.1_1_19:11462501-11464130:+|nuORF	REV__ENST00000586479.1_1_19:11462501-11464130:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1523.291674792767	1	1523.55072	1522.54344	2.1753	0.0033142	-0.023112	-3.5213E-05	2.1522	0.003279	1523.5496458476	27.689	0.17205	27.96	27.864	28.036	0.27119					6	5	2	0	0	0	0.14606	1	11580	11580		0	0	1	5871400	+		2370	14033	1129	1140	3063	3063					-0.1969286897949587
CECYTCERR	9	Unmodified	_CECYTCERR_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF;nc|ENSG00000110066|Q4FZB7-2|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1527282595634	3	388.152788	1161.43653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.458	1	68.458	67.958	68.958	0								0	0	0	0.42693	1	28509	28509		0.26902	0.033176	1				2371	1693	1130	1141	3064	3064					-0.13772742465516785
CEDFVNDYFK	10	Unmodified	_CEDFVNDYFK_					0	0	0			REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.1813537478447	3	427.181506	1278.52269	-0.23669	-0.00010111	-0.34694	-0.00014821	-0.58363	-0.00024932	427.18183922204645	13.283	0.40337	13.283	13.052	13.456	0					29	12	3	0	0	0	0.82659	1	5496	5496		8.4443	4.0382	1	1492000	+		2372	15851	1131	1142	3065	3065					-0.10543136087517269
CEDFVNDYFK	10	Unmodified	_CEDFVNDYFK_					0	0	0			REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	427.181506	1278.52269	-0.23669	-0.00010111	-0.34694	-0.00014821	-0.58363	-0.00024932	427.18183922204645	13.283	0.40337	13.283	13.052	13.456	0	-0.053868	-0.00029704	NaN	8.4443	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1492000	+		2373	15851	1131	1142							-0.10543136087517269
CEDFVNDYFK	10	Unmodified	_CEDFVNDYFK_					0	0	0			REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	REV__tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	427.181506	1278.52269	0.55655	0.00023775	0.71205	0.00030418	1.2686	0.00054192	427.1810868267893	13.291	0.21667	13.391	13.249	13.465	0.09944	0.053868	0.0010601	NaN	8.4443	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241340	+		2374	15851	1131	1142							-0.10543136087517269
CEDRYYSAEK	10	Unmodified	_CEDRYYSAEK_					0	0	0			REV__ENSG00000187672|ENST00000288221|ERC2	REV__ENSG00000187672|ENST00000288221|ERC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.8489257693291	3	421.848527	1262.52375	-0.42123	-0.00017769	1.6162	0.00068177	1.1949	0.00050408	421.849234116296	12.482	1.0797	12.482	12.003	13.083	0					129	34	5	0	0	0	0.82019	4	5168	5079;5168;5207;5250		5.7834	2.4163	1	22330000	+		2375	11543	1132	1143	3066;3067;3068;3069	3067					-0.0970092171860415
CEDVDECAK	9	Unmodified	_CEDVDECAK_					0	0	0			REV__ENSG00000162591|ENST00000356575|MEGF6	REV__ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.1918517947197	2	506.191525	1010.3685	2.3222	0.0011755	-1.7537	-0.00088769	0.56857	0.00028781	506.1903722899294	38.938	0.43836	40.235	39.974	40.413	1.2961					31	13	3	0	0	0	0.63129	1	16344	16344		10.074	4.3135	1	3674800	+		2376	10648	1133	1144	3070	3070					-0.13627288844520535
CEDVDECAK	9	Unmodified	_CEDVDECAK_					0	0	0			REV__ENSG00000162591|ENST00000356575|MEGF6	REV__ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.1917297244072	2	506.191525	1010.3685	1.0734	0.00054335	0.097721	4.9466E-05	1.1711	0.00059282	506.19126254672784	38.337	0.43861	40.173	39.99	40.429	1.8366					32	13	3	0	0	0	0.70108	1	16047	16047		7.2892	2.96	1	2176900	+		2377	10648	1133	1144	3071	3071					-0.13627288844520535
CETYEFHYDK	10	Unmodified	_CETYEFHYDK_					0	0	0			REV__ENSG00000164659|ENST00000450689|ELAPOR2	REV__ENSG00000164659|ENST00000450689|ELAPOR2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1203185915947	3	445.516777	1333.5285	0.29648	0.00013209	-3.8976	-0.0017365	-3.6012	-0.0016044	445.8480851112169	13.315	0.43301	13.315	13.177	13.61	0					43	13	5	0	0	0	0.12542	1	5638	5638		0.69767	0.24315	1	2530700	+		2378	10744	1134	1145	3072	3072					-0.12492037575839277
CFHDNGVTI	9	Unmodified	_CFHDNGVTI_					0	0	0			REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2296020388603	2	503.226559	1004.43857	0.83203	0.0004187	3.3201	0.0016708	4.1522	0.0020895	503.2281778736216	19.013	0.25074	20.072	19.913	20.164	1.0585					12	7	2	0	0	0	0.72823	1	7933	7933		6.2058	0.97511	1	528190	+		2379	11027	1135	1146	3073	3073					-0.06347622393741403
CFHDNGVTI	9	Unmodified	_CFHDNGVTI_					0	0	0			REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	503.226559	1004.43857	0.83203	0.0004187	3.3201	0.0016708	4.1522	0.0020895	503.2281778736216	19.013	0.25074	20.072	19.913	20.164	1.0585	0.042591	-0.00054865	NaN	6.2058	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	528190	+		2380	11027	1135	1146							-0.06347622393741403
CFHDNGVTI	9	Unmodified	_CFHDNGVTI_					0	0	0			REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	REV__nc|ENSG00000171467|Q5VUA4-2|ZNF318	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	503.226559	1004.43857	0.14789	7.4422E-05	4.0659	0.0020461	4.2138	0.0021205	503.2284411531661	18.538	0.23933	19.986	19.85	20.09	1.448	-0.042591	0.00020198	NaN	6.2058	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544820	+		2381	11027	1135	1146							-0.06347622393741403
CFKKKKKR	8	Unmodified	_CFKKKKKR_					0	0	0			REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.3421508669853	2	533.339321	1064.66409	2.5007	0.0013337	1.1202	0.00059745	3.6209	0.0019312	533.3399740136356	83.791	0.99835	84.061	83.77	84.768	0.27029					89	31	5	0	0	0	0.89178	1	35098	35098		0.69038	0	1	165320000	+		2382	10917	1136	1147	3074	3074					0.13434371586936322
CFLLFLDVL	9	Unmodified	_CFLLFLDVL_					0	0	0			REV__ENST00000586458.5_1_19:37071552-37071657:-|nuORF	REV__ENST00000586458.5_1_19:37071552-37071657:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	541.8016845583916	2	541.801371	1081.58819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.799	1	67.707	67.207	68.207	1.9085								0	0	0	0.22015	1	27604	27604		24.674	4.2203	1		+		2383	14032	1137	1148	3075	3075					0.050659298961363675
CFLQRWMISL	10	Unmodified	_CFLQRWMISL_					0	0	0			REV__ENST00000256646.6_1_1:120460322-120460361:-|nuORF	REV__ENST00000256646.6_1_1:120460322-120460361:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	648.3846313357353	2	648.833211	1295.65187	1.7713	0.0011493	-1.6768	-0.0010879	0.094537	6.1339E-05	648.8326379794169	49.156	0.30641	51.134	50.917	51.223	1.9772					12	9	2	0	0	0	0.12525	1	20551	20551		3.5965	2.267	1	504650	+		2384	12166	1138	1149	3076	3076					0.015869670615984433
CFQEHHFIQ	9	Unmodified	_CFQEHHFIQ_					0	0	0		ENST00000345429.10_1_13:97986629-97995285:+|nuORF	ENST00000345429.10_1_13:97986629-97995285:+|nuORF	ENST00000345429.10_1_13:97986629-97995285:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	397.1844055056572	3	396.846681	1187.51821	2.573	0.0010211	2.6472	0.0010505	5.2202	0.0020716	397.1829834561668	76.313	0.88142	78.08	77.537	78.419	1.7672					37	27	2	0	0	0	0.84963	1	32092	32092		0.26902	0	1	1729200			2385	5962	1139	1150	3077	3077					-0.06804555719759264
CFQEHHFIQ	9	Unmodified	_CFQEHHFIQ_					0	0	0		ENST00000345429.10_1_13:97986629-97995285:+|nuORF	ENST00000345429.10_1_13:97986629-97995285:+|nuORF	ENST00000345429.10_1_13:97986629-97995285:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	396.846681	1187.51821	2.0779	0.00082462	3.262	0.0012945	5.34	0.0021192	397.182780227358	76.704	0.80748	77.998	77.519	78.326	1.2938	-0.041066	0.0002355	NaN	0.26902	33	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1915600			2386	5962	1139	1150							-0.06804555719759264
CFSSPCMECF	10	Unmodified	_CFSSPCMECF_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1565124392509	3	385.132225	1152.37484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.29	1	100.5	100	101	0.20527								0	0	0	0.66254	1	42176	42176		0.15932	0.064481	1		+		2387	10790	1140	1151	3078	3078					-0.19524810209009047
CFYRTTPKLCA	11	Unmodified	_CFYRTTPKLCA_					0	0	0			REV__ENST00000451726.1_1_19:36205079-36205238:+|nuORF	REV__ENST00000451726.1_1_19:36205079-36205238:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8826171755791	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.309	1	82.309	81.809	82.809	0								0	0	0	0.63775	1	34289	34289		0.50596	0.23694	1		+		2388	13138	1141	1152	3079	3079					-0.012699271806695833
CGAEELRK	8	Unmodified	_CGAEELRK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.2280761599541	2	453.229102	904.443651	-0.17072	-7.7374E-05	-0.17764	-8.051E-05	-0.34835	-0.00015788	453.22890171067473	10.921	0.38087	11.59	11.415	11.796	0.66934					26	11	3	0	0	0	0.84677	1	4518	4518		21.747	4.8044	1	1145400	+		2389	15393	1142	1153	3080	3080					-0.012393185311225352
CGAEELRK	8	Unmodified	_CGAEELRK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	302.4880859255791	3	302.488493	904.443651	-1.6352	-0.00049462	0.28718	8.687E-05	-1.348	-0.00040775	302.48861614914335	10.988	0.38087	11.658	11.415	11.796	0.66934					30	11	3	0	0	0	0.76844	1	4558	4558		24.021	1.2843	1	2841400	+		2390	15393	1142	1153	3081	3081					-0.012393185311225352
CGAEELRK	8	Unmodified	_CGAEELRK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.2292358279228	2	453.229102	904.443651	0.24768	0.00011225	-0.36153	-0.00016386	-0.11385	-5.16E-05	453.2291578624104	10.833	0.2482	11.595	11.453	11.701	0.76165					24	9	3	0	0	0	0.67508	1	4480	4480		25.399	0	1	1892400	+		2391	15393	1142	1153	3082	3082					-0.012393185311225352
CGCGCGKGCC	10	Unmodified	_CGCGCGKGCC_					0	0	0		nc|ENSG00000284667|A0A286YF46|SCYGR5;nc|ENSG00000285843|P0DSO2|SCYGR9;nc|ENSG00000284718|A0A286YF01|SCYGR7;nc|ENSG00000284725|A0A286YF77|SCYGR6;nc|ENSG00000284643|A0A286YFB4|SCYGR2	nc|ENSG00000284667|A0A286YF46|SCYGR5	nc|ENSG00000284667|A0A286YF46|SCYGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.6261779665947	2	445.625929	889.237305	1.3897	0.00061927	-0.86827	-0.00038692	0.5214	0.00023235	445.62574643726526	95.916	0.45834	95.916	95.692	96.15	0					38	15	3	0	0	0	0.89803	1	40081	40081		0	0	1	16440000			2392	8017	1143	1154	3083	3083					-0.211744172894214
CGCGCGKGCC	10	Unmodified	_CGCGCGKGCC_					0	0	0		nc|ENSG00000284667|A0A286YF46|SCYGR5;nc|ENSG00000285843|P0DSO2|SCYGR9;nc|ENSG00000284718|A0A286YF01|SCYGR7;nc|ENSG00000284725|A0A286YF77|SCYGR6;nc|ENSG00000284643|A0A286YFB4|SCYGR2	nc|ENSG00000284667|A0A286YF46|SCYGR5	nc|ENSG00000284667|A0A286YF46|SCYGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.6280700564384	2	445.625929	889.237305	3.2124	0.0014315	-2.8435	-0.0012671	0.36891	0.0001644	445.6253934944159	95.774	1.0336	95.898	95.27	96.304	0.12331					59	36	3	0	0	0	0.89803	2	40038	40038;40087		0	0	1	14470000			2393	8017	1143	1154	3084;3085	3084					-0.211744172894214
CGCGCGKGCC	10	Unmodified	_CGCGCGKGCC_					0	0	0		nc|ENSG00000284667|A0A286YF46|SCYGR5;nc|ENSG00000285843|P0DSO2|SCYGR9;nc|ENSG00000284718|A0A286YF01|SCYGR7;nc|ENSG00000284725|A0A286YF77|SCYGR6;nc|ENSG00000284643|A0A286YFB4|SCYGR2	nc|ENSG00000284667|A0A286YF46|SCYGR5	nc|ENSG00000284667|A0A286YF46|SCYGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.6280395388603	2	445.625929	889.237305	3.4047	0.0015172	-2.0869	-0.00092997	1.3178	0.00058726	445.6261805971536	94.811	0.78246	96	95.714	96.496	1.1887					52	29	3	0	0	0	0.89803	1	39832	39832		0	0	1	6371100			2394	8017	1143	1154	3086	3086					-0.211744172894214
CGCGCGKGCC	10	Unmodified	_CGCGCGKGCC_					0	0	0		nc|ENSG00000284667|A0A286YF46|SCYGR5;nc|ENSG00000285843|P0DSO2|SCYGR9;nc|ENSG00000284718|A0A286YF01|SCYGR7;nc|ENSG00000284725|A0A286YF77|SCYGR6;nc|ENSG00000284643|A0A286YFB4|SCYGR2	nc|ENSG00000284667|A0A286YF46|SCYGR5	nc|ENSG00000284667|A0A286YF46|SCYGR5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	445.625929	889.237305	4.291	0.0019122	-4.7935	-0.0021361	-0.50254	-0.00022394	445.6256581933414	95.139	1.5617	95.56	94.413	95.975	0.4212	-0.28344	-0.0026702	NaN	0	74	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6203700			2395	8017	1143	1154							-0.211744172894214
CGCGSDCECV	10	Unmodified	_CGCGSDCECV_					0	0	0			REV__ENST00000492099.1_1_15:84116018-84234026:+|nuORF	REV__ENST00000492099.1_1_15:84116018-84234026:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	488.1383849978447	2	488.137381	974.260208	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.506	1	56.915	56.415	57.415	1.4099								0	0	0	0.66237	1	23253	23253		0.45834	0.45834	1		+		2396	13437	1144	1155	3087	3087					-0.22795119690965748
CGCNWCWE	8	Unmodified	_CGCNWCWE_					0	0	0			REV__nc|ENSG00000185345|O60260-4|PRKN	REV__nc|ENSG00000185345|O60260-4|PRKN	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1068298220634	3	334.108519	999.303728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1477	1	2.1477	1.6477	2.6477	0								0	0	0	1.0178	1	881	881		0.40072	0	1		+		2397	11460	1145	1156	3088	3088					-0.19595142131515786
CGIKPVWA	8	Unmodified	_CGIKPVWA_					0	0	0		ENST00000450269.5_1_1:45279484-45279676:+|nuORF	ENST00000450269.5_1_1:45279484-45279676:+|nuORF	ENST00000450269.5_1_1:45279484-45279676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2376281619072	2	437.236199	872.457844	1.8962	0.0008291	1.3637	0.00059624	3.2599	0.0014253	437.23715244491547	68.895	0.28073	69.217	69.064	69.344	0.32224					12	8	2	0	0	0	0.89008	1	28845	28845		2.5775	0.73324	1	475180			2398	6603	1146	1157	3089	3089					0.01651378687813576
CGLSQEKEPFK	11	Unmodified	_CGLSQEKEPFK_					0	0	0		ENSG00000132326|ENST00000254657|PER2	ENSG00000132326|ENST00000254657|PER2	ENSG00000132326|ENST00000254657|PER2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5458557009697	3	422.544667	1264.61217	-0.26271	-0.00011101	0.84384	0.00035656	0.58113	0.00024555	422.5451172379924	15.667	0.30931	15.667	15.56	15.87	0					11	9	2	0	0	0	0.95289	1	6513	6513		6.6235	0.84002	1	1014700			2399	2526	1147	1158	3090	3090					-0.009548814081426826
CGNWRIVRTW	10	Unmodified	_CGNWRIVRTW_					0	0	0		ENST00000469301.1_1_3:169684298-169684427:-|nuORF	ENST00000469301.1_1_3:169684298-169684427:-|nuORF	ENST00000469301.1_1_3:169684298-169684427:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887206912041	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0092	1	2.7576	2.2576	3.2576	0.7484								0	0	0	0.66254	1	833	833		0.15932	0	1				2400	6725	1148	1159	3091	3091					0.011907902252232816
CGNYYMSWSC	10	Unmodified	_CGNYYMSWSC_					0	0	0			REV__ENSG00000168769|ENST00000380013|TET2	REV__ENSG00000168769|ENST00000380013|TET2	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2106201052666	2	607.209195	1212.40384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.15	1	119.15	118.65	119.65	0								0	0	0	0.6624	1	51320	51320		0.40072	0	1		+		2401	10922	1149	1160	3092	3092					-0.1938694958837459
CGPGGGTKM	9	Unmodified	_CGPGGGTKM_					0	0	0		ENSG00000183114|ENST00000332947|FAM43B	ENSG00000183114|ENST00000332947|FAM43B	ENSG00000183114|ENST00000332947|FAM43B	MSMS	GG20161007_CRH_Patient100_W632_01	3	404.1781494021416	2	404.178023	806.341494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.852	1	95.593	95.093	96.093	0.74124								0	0	0	0.42693	1	39902	39902		1.8442	1.0506	1				2402	4641	1150	1161	3093	3093					-0.06942307874385278
CGRRSGTTHF	10	Unmodified	_CGRRSGTTHF_					0	0	0		ENST00000319172.9_1_3:119150883-119151006:-|nuORF	ENST00000319172.9_1_3:119150883-119151006:-|nuORF	ENST00000319172.9_1_3:119150883-119151006:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.5141479372978	3	374.513813	1120.51961	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.383	1	25.034	24.534	25.534	1.6511								0	0	0	0.66031	1	9764	9764		1.9064	0	1				2403	5839	1151	1162	3094	3094					-0.03582921631004865
CGSLNWKKK	9	Unmodified	_CGSLNWKKK_					0	0	0		chr1:206053265-206056389|147|19.75|0.01|11.43|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056389,206058429|RHEX,None|6;chr1:206053265-206056227|417|91.38|0.57|7.31|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056227,206058429|RHEX,None|8;chr1:206053265-206056224|418|104.72|0.74|7.15|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056224,206058429|RHEX,None|7;chr1:206053265-206056189|264|12.77|0.01|10.99|+|0|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056189,206058429|RHEX,None|9;chr1:206053265-206056179|413|96.96|0.64|7.25|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056179,206058429|RHEX,None|9;chr1:206053265-206056164|132|31.45|0.0|13.36|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056164,206058429|RHEX,None|10;Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|21|1|sense	chr1:206053265-206056389|147|19.75|0.01|11.43|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056389,206058429|RHEX,None|6	chr1:206053265-206056389|147|19.75|0.01|11.43|+|1|TE_info:Harlequin-int,Harlequin-int_dup70,ERV1,LTR,acceptor,+,206056389,206058429|RHEX,None|6	MSMS	GG20161007_CRH_Patient100_W632_01	3	355.0689880251884	3	355.195421	1062.56443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.32	109.82	110.82	0.16133								0	0	0	0.42693	1	47860	47860		0.23584	0.076522	1				2404	167	1152	1163	3095	3095					0.03565509182340065
CGWRWLWIP	9	Unmodified	_CGWRWLWIP_					0	0	0			REV__chr1:204620218-204630832|275|12.68|0.17|6.25|-|0|LRRN2,None|1	REV__chr1:204620218-204630832|275|12.68|0.17|6.25|-|0|LRRN2,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2094299197197	3	406.207661	1215.60115	2.7808	0.0011296	0.59861	0.00024316	3.3794	0.0013727	406.20765889363076	90.331	0.88359	90.541	89.92	90.804	0.20904					45	27	3	0	0	0	0.81521	1	37832	37832		2.7352	0.10396	1	3764600	+		2405	8214	1153	1164	3096	3096					0.0019780579891630623
CGYAGPPR	8	Unmodified	_CGYAGPPR_					0	0	0			REV__ENST00000589400.5_1_19:12889141-12889216:-|nuORF	REV__ENST00000589400.5_1_19:12889141-12889216:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.6906616091728	2	410.692155	819.369758	0.45912	0.00018856	-3.1855	-0.0013083	-2.7264	-0.0011197	410.69062851279017	67.195	0.54819	67.195	66.924	67.473	0					48	17	3	0	0	0	0.89176	1	28011	28011		0.79363	0.10326	1	34356000	+		2406	14055	1154	1165	3097	3097					-0.04715241902795242
CHAAEDSGD	9	Unmodified	_CHAAEDSGD_					0	0	0			REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000123384|ENST00000243077|LRP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1085693240166	3	302.10823	903.30286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.213	1	99.293	98.793	99.793	0.080376								0	0	0	0.42693	1	41537	41537		0.26902	0.26902	1		+		2407	9621	1155	1166	3098	3098					-0.15265941975201258
CHKTTKKY	8	Unmodified	_CHKTTKKY_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|66|1|sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|66|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	336.2021362185478	3	336.848022	1007.52224	1.4993	0.00050503	-0.98713	-0.00033251	0.51213	0.00017251	336.8474724530313	79.41	0.34246	80.661	80.488	80.831	1.2512					22	10	3	0	0	0	2.3239	1	33290	33290		0	0	1	731890	+		2408	14307	1156	1167	3099	3099					0.01877533773961204
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1220580935478	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.71238	1	0.71238	0.21238	1.2124	0								0	0	0	0.42693	1	292	292		0.26902	0.26902	1		+		2409	15776	1157	1168	3100	3100					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1223022341728	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0441	1	1.0441	0.54415	1.5441	0								0	0	0	0.42693	1	428	428		0.26902	0.26902	1		+		2410	15776	1157	1168	3101	3101					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1229125857353	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5151	1	1.5151	1.0151	2.0151	0								0	0	0	0.42693	1	622	622		0.26902	0.033176	1		+		2411	15776	1157	1168	3102	3102					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1223022341728	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5488	1	2.5488	2.0488	3.0488	0								0	0	0	0.42693	1	1045	1045		0.26902	0.26902	1		+		2412	15776	1157	1168	3103	3103					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1225158572197	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3205	1	4.3205	3.8205	4.8205	0								0	0	0	0.42693	1	1776	1776		0.26902	0.26902	1		+		2413	15776	1157	1168	3104	3104					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1222717165947	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0181	1	5.0181	4.5181	5.5181	0								0	0	0	0.42693	1	2061	2061		0.26902	0.26902	1		+		2414	15776	1157	1168	3105	3105					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1218444705009	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4931	1	5.4931	4.9931	5.9931	0								0	0	0	0.42693	1	2256	2256		0.26902	0.26902	1		+		2415	15776	1157	1168	3106	3106					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1227294802666	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3302	1	6.3302	5.8302	6.8302	0								0	0	0	0.42693	1	2599	2599		0.26902	0.26902	1		+		2416	15776	1157	1168	3107	3107					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1224853396416	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2125	1	7.2125	6.7125	7.7125	0								0	0	0	0.42693	1	2966	2966		0.26902	0.26902	1		+		2417	15776	1157	1168	3108	3108					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1231262087822	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.69	1	50.69	50.19	51.19	0								0	0	0	0.42693	1	21144	21144		0.26902	0.26902	1		+		2418	15776	1157	1168	3109	3109					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1223937869072	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.076	1	72.076	71.576	72.576	0								0	0	0	0.42693	1	30013	30013		0.26902	0.26902	1		+		2419	15776	1157	1168	3110	3110					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	369.1225463747978	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.695	1	25.947	25.447	26.447	0.25197								0	0	0	0.42693	1	10730	10730		0.26902	0.1097	1		+		2420	15776	1157	1168	3111	3111					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	369.1228210330009	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.888	1	49.218	48.718	49.718	0.33034								0	0	0	0.42693	1	20495	20495		0.26902	0.26902	1		+		2421	15776	1157	1168	3112	3112					-0.20167791793937795
CHQYGCYEC	9	Unmodified	_CHQYGCYEC_					0	0	0			REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	REV__tr|A0A7D6ZY59|A0A7D6ZY59_9CLOT[FeFe]hydrogenaseH-clusterradicalSAMmaturaseHydGOS=ClostridiumintestinaleOX=36845GN=hydGPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	369.1234619021416	3	369.122717	1104.34632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.71	1	112.86	112.36	113.36	0.14912								0	0	0	0.42693	1	48819	48819		0.26902	0.26902	1		+		2422	15776	1157	1168	3113	3113					-0.20167791793937795
CHSACAAG	8	Unmodified	_CHSACAAG_					0	0	0		ENST00000369630.7_1_1:113264878-113266594:+|nuORF;ENST00000361886.3_1_1:113264878-113266695:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.1348754763603	2	360.133616	718.252679	2.8793	0.0010369	-3.6235	-0.001305	-0.74426	-0.00026803	360.1338889633529	93.429	0.68655	94.706	94.388	95.074	1.277					90	21	6	0	0	0	0.89008	1	39271	39271		2.5775	0	1	7431600			2423	6043	1158	1169	3114	3114					-0.11771723114065935
CHSACAAG	8	Unmodified	_CHSACAAG_					0	0	0		ENST00000369630.7_1_1:113264878-113266594:+|nuORF;ENST00000361886.3_1_1:113264878-113266695:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	360.133616	718.252679	-0.8964	-0.00032282	0.50804	0.00018296	-0.38837	-0.00013986	360.1355423512525	94.657	0.58358	94.657	94.367	94.95	0	0.0017794	0.0018092	NaN	2.5775	81	18	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8476900			2424	6043	1158	1169							-0.11771723114065935
CHSACAAG	8	Unmodified	_CHSACAAG_					0	0	0		ENST00000369630.7_1_1:113264878-113266594:+|nuORF;ENST00000361886.3_1_1:113264878-113266695:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	360.133616	718.252679	2.434	0.00087656	-1.1206	-0.00040357	1.3134	0.00047299	360.1345326175044	94.411	0.56741	94.556	94.356	94.924	0.14493	-0.099516	0.00063608	NaN	2.5775	62	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4544800			2425	6043	1158	1169							-0.11771723114065935
CHSACAAG	8	Unmodified	_CHSACAAG_					0	0	0		ENST00000369630.7_1_1:113264878-113266594:+|nuORF;ENST00000361886.3_1_1:113264878-113266695:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	ENST00000369630.7_1_1:113264878-113266594:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	360.133616	718.252679	3	0.0010804	-3.5932	-0.001294	-0.59316	-0.00021362	360.13405846232155	93.83	0.66568	94.702	94.353	95.019	0.87176	0.046532	-0.0011448	NaN	2.5775	87	20	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7472600			2426	6043	1158	1169							-0.11771723114065935
CIELLPQTF	9	Unmodified	_CIELLPQTF_					0	0	0		ENSG00000135973|ENST00000258456|GPR45	ENSG00000135973|ENST00000258456|GPR45	ENSG00000135973|ENST00000258456|GPR45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2767211794853	2	532.27826	1062.54197	2.7964	0.0014885	-3.7156	-0.0019777	-0.91918	-0.00048926	532.2760743826134	71.916	0.42684	73.74	73.539	73.966	1.824					18	13	2	0	0	0	0.25667	1	30163	30163		27.629	0.74515	1	3348400			2427	2697	1159	1170	3115	3115					0.01319864994047748
CIGHNCEQW	9	Unmodified	_CIGHNCEQW_					0	0	0			REV__ENSG00000160318|ENST00000291715|CLDND2	REV__ENSG00000160318|ENST00000291715|CLDND2	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2158080935478	2	545.215669	1088.41678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.89	1	15.787	15.287	16.287	0.89664								0	0	0	0.42693	1	6178	6178		1.8442	0.36234	1		+		2428	10600	1160	1171	3116	3116					-0.12388750413947491
CIKCPIIEIQA	11	Unmodified	_CIKCPIIEIQA_					0	0	0			REV__ENST00000558234.1_1_15:60823934-60884616:-|nuORF	REV__ENST00000558234.1_1_15:60823934-60884616:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8346435427666	2	615.832877	1229.6512	3.0517	0.0018793	0.23018	0.00014175	3.2819	0.0020211	615.8328526761218	100.33	0.1351	100.51	100.44	100.57	0.18047					12	4	4	0	0	0	0.89436	1	42214	42214		10.151	0.76745	1	7762900	+		2429	13880	1161	1172	3117	3117					0.045561276219132196
CIPRKHLLL	9	Unmodified	_CIPRKHLLL_					0	0	0		ENST00000469380.1_1_1:36939030-36939378:-|nuORF;ENST00000480825.6_1_1:36939030-36939345:-|nuORF;CSF3R|p.R428*|1|0.04|ENSG00000119535|chr1:36471436-36471437|-/CA|frameshift_variant;ENST00000464365.2_1_1:36934562-36941005:-|nuORF;nc|ENSG00000119535|Q99062-2|CSF3R;nc|ENSG00000119535|Q99062-4|CSF3R;ENSG00000119535|ENST00000373106|CSF3R;nc|ENSG00000119535|Q99062-3|CSF3R	ENST00000469380.1_1_1:36939030-36939378:-|nuORF	ENST00000469380.1_1_1:36939030-36939378:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	364.1188232302666	3	364.895195	1091.66375	1.4053	0.00051278	0.49534	0.00018075	1.9006	0.00069353	364.89507940984885	85.321	0.37109	86.48	86.241	86.612	1.159					20	13	2	0	0	0	0.11954	1	35740	35740		0.26902	0	1	4036900			2430	377	1162	1173	3118	3118					0.12158951867127143
CIPRKHLLL	9	Unmodified	_CIPRKHLLL_					0	0	0		ENST00000469380.1_1_1:36939030-36939378:-|nuORF;ENST00000480825.6_1_1:36939030-36939345:-|nuORF;CSF3R|p.R428*|1|0.04|ENSG00000119535|chr1:36471436-36471437|-/CA|frameshift_variant;ENST00000464365.2_1_1:36934562-36941005:-|nuORF;nc|ENSG00000119535|Q99062-2|CSF3R;nc|ENSG00000119535|Q99062-4|CSF3R;ENSG00000119535|ENST00000373106|CSF3R;nc|ENSG00000119535|Q99062-3|CSF3R	ENST00000469380.1_1_1:36939030-36939378:-|nuORF	ENST00000469380.1_1_1:36939030-36939378:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	364.895195	1091.66375	2.3579	0.00086037	0.3403	0.00012417	2.6982	0.00098455	364.89532121928363	86.058	0.42266	86.31	86.068	86.491	0.25227	-0.098301	-0.00090302	NaN	0.26902	38	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5060700			2431	377	1162	1173							0.12158951867127143
CIRARTSS	8	Unmodified	_CIRARTSS_					0	0	0			REV__ENST00000473073.1_1_3:136045962-136048865:+|nuORF	REV__ENST00000473073.1_1_3:136045962-136048865:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	447.7651855349541	2	447.234719	892.454884	2.7354	0.0012234	-1.5533	-0.0006947	1.1821	0.00052868	447.23394195367564	73.259	0.47614	73.584	73.34	73.816	0.32494					35	15	3	0	0	0	2.3239	1	30682	30682		1.8442	0	1	7820200	+		2432	9398	1163	1174	3119	3119					0.004355035630283055
CISFCVIGTVP	11	Unmodified	_CISFCVIGTVP_					0	0	0		chr1:103745515-103750424|261|25.86|0.0|21.3|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|6;chr1:103745227-103750424|224|26.5|0.0|21.34|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|6;chr1:103651377-103750424|201|17.3|0.0|20.72|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|6;chr1:103651250-103750424|173|10.4|0.0|19.99|+|0|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|6;chr1:103651089-103750424|169|18.98|0.0|20.86|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|6	chr1:103745515-103750424|261|25.86|0.0|21.3|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|6	chr1:103745515-103750424|261|25.86|0.0|21.3|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|6	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.1939575076103	3	380.192689	1137.55624	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.362	1	60.782	60.282	61.282	1.4196								0	0	0	0.63775	1	24893	24893		1.2148	0.25256	1				2433	157	1164	1175	3120	3120					-0.007038058492980781
CIVEFIEVL	9	Unmodified	_CIVEFIEVL_					0	0	0		tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7895995974541	2	532.788461	1063.56237	4.7419	0.0025265	-1.029	-0.00054825	3.7129	0.0019782	532.7874300251713	89.987	0.44534	91.006	90.894	91.34	1.0199					33	13	4	0	0	0	0.19075	1	37926	37926		34.102	0	1	3224300			2434	17038	1165	1176	3121	3121					0.03313035653877705
CIVEFIEVL	9	Unmodified	_CIVEFIEVL_					0	0	0		tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7892333865166	2	532.788461	1063.56237	4.6763	0.0024915	-1.0252	-0.00054622	3.651	0.0019452	532.7884800668256	89.634	0.44604	91.039	90.858	91.304	1.4045					31	13	3	0	0	0	0.49082	1	37769	37769		15.847	0	1	2044000			2435	17038	1165	1176	3122	3122					0.03313035653877705
CKAGNSCP	8	Unmodified	_CKAGNSCP_					0	0	0			REV__ENSG00000198719|ENST00000366756|DLL1	REV__ENSG00000198719|ENST00000366756|DLL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	390.1620666384697	2	390.162373	778.310194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.752	1	57.752	57.252	58.252	0								0	0	0	1.0178	1	24099	24099		0.79363	0	1		+		2436	11729	1166	1177	3123	3123					-0.08782880908495372
CKAYNADF	8	Unmodified	_CKAYNADF_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A;POLR1A|p.I816Afs*8|1|0.08|ENSG00000068654|chr2:86049190-86049191|-/GTGGGGATAAATGCATGCA|frameshift_variant;POLR1A|p.E867Afs*9|1|0.15|ENSG00000068654|chr2:86048918-86048919|-/G|frameshift_variant	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MSMS	GG20161007_CRH_Patient100_A02_02	2	466.2035705447197	2	466.202553	930.390553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.245	1	46.574	46.074	47.074	0.32899								0	0	0	1.0178	1	19407	19407		0.6015	0	1				2437	833	1167	1178	3124	3124					-0.07742696313800934
CKCPRPVV	8	Unmodified	_CKCPRPVV_					0	0	0		nc|ENSG00000153563|P01732-2|CD8A;ENSG00000153563|ENST00000283635|CD8A;nc|ENSG00000153563|P01732-3|CD8A;CD8A|p.G225R|1|0.06|ENSG00000153563|chr2:86785955-86785955|C/T|missense_variant	nc|ENSG00000153563|P01732-2|CD8A	nc|ENSG00000153563|P01732-2|CD8A	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1646911501884	3	301.163064	900.467363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.747	1	77.518	77.018	78.018	1.7709								0	0	0	1.0178	1	31779	31779		0.40072	0	1				2438	3362	1168	1179	3125	3125					0.013148237016935127
CKGIGSSG	8	Unmodified	_CKGIGSSG_					0	0	0			REV__KDSR|p.T38I|1|0.05|ENSG00000119537|chr18:63362864-63362864|G/A|missense_variant	REV__KDSR|p.T38I|1|0.05|ENSG00000119537|chr18:63362864-63362864|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	354.1892883181572	2	354.670889	707.327224	1.5826	0.00056129	-3.2252	-0.0011439	-1.6426	-0.00058259	354.66759383410744	63.394	0.69064	63.723	63.193	63.883	0.32943					30	21	2	0	0	0	2.3239	1	26400	26400		0.69038	0.69038	1	325870	+		2439	9544	1169	1180	3126	3126					-0.03814637031030088
CKGPLIRS	8	Unmodified	_CKGPLIRS_					0	0	0			REV__ENST00000395468.8_1_14:55518499-55529384:+|nuORF	REV__ENST00000395468.8_1_14:55518499-55529384:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2544738650322	2	437.25238	872.490207	1.2856	0.00056212	2.5732	0.0011251	3.8588	0.0016873	437.2538482242291	73.326	0.28154	73.326	73.09	73.372	0					21	8	3	0	0	0	0.88663	1	30481	30481		4.756	2.4533	1	5325300	+		2440	12839	1170	1181	3127	3127					0.04886166090818733
CKILATFLL	9	Unmodified	_CKILATFLL_					0	0	0		ENSG00000197403|ENST00000641846|OR6N1	ENSG00000197403|ENST00000641846|OR6N1	ENSG00000197403|ENST00000641846|OR6N1	MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3096801638603	2	511.309364	1020.60417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.83	1	102.89	102.39	103.39	0.062805								0	0	0	0.42693	1	43085	43085		1.8442	1.0506	1				2441	5002	1171	1182	3128	3128					0.09469636133053427
CKKFINLIFL	10	Unmodified	_CKKFINLIFL_					0	0	0			REV__ENST00000338785.7_1_21:38885904-38886156:+|nuORF	REV__ENST00000338785.7_1_21:38885904-38886156:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8701660037041	2	619.87012	1237.72569	2.1274	0.0013187	-1.4491	-0.00089823	0.67835	0.00042049	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	0.89803	1	32289	32289		3.2813	1.7994	1	3039400	+		2442	12484	1172	1183	3129	3129					0.11633258495567134
CKLNIRHRGCC	11	Unmodified	_CKLNIRHRGCC_					0	0	0		ENST00000580219.5_2_17:46199002-46199104:+|nuORF	ENST00000580219.5_2_17:46199002-46199104:+|nuORF	ENST00000580219.5_2_17:46199002-46199104:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8828307986259	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.553	1	22.73	22.23	23.23	1.177								0	0	0	0.63775	1	9000	9000		0.50596	0.09769	1				2443	7430	1173	1184	3130	3130					-0.012014110126301603
CKPCCCQSNC	10	Unmodified	_CKPCCCQSNC_					0	0	0		ENSG00000205867|ENST00000412090|KRTAP5-2	ENSG00000205867|ENST00000412090|KRTAP5-2	ENSG00000205867|ENST00000412090|KRTAP5-2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2531921267509	3	363.453192	1087.33775	-0.26875	-9.7678E-05	1.9958	0.00072538	1.727	0.0006277	363.45387423863207	51.615	0.80875	53.011	52.745	53.554	1.3966					41	27	2	0	0	0	0.12561	1	21821	21821		0	0	1	8540400			2444	5190	1174	1185	3131	3131					-0.20242805026418864
CKRLPVTV	8	Unmodified	_CKRLPVTV_					0	0	0			REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	MSMS	GG20161007_CRH_Patient100_A02_02	2	458.2789489626884	2	458.275855	914.537157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.24	1	104.3	103.8	104.8	0.059502								0	0	0	1.0178	1	43915	43915		4.756	0	1		+		2445	9759	1175	1186	3132	3132					0.07647025641972505
CKRLPVTV	8	Unmodified	_CKRLPVTV_					0	0	0			REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	REV__nc|ENSG00000129680|Q8IWC1-3|MAP7D3	MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2773925662041	2	458.275855	914.537157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.23	1	104.39	103.89	104.89	0.16055								0	0	0	1.0178	1	44104	44104		2.3027	0	1		+		2446	9759	1175	1186	3133	3133					0.07647025641972505
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548034548759	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.341	1	20.341	19.841	20.841	0								0	0	0	1.0178	1	8456	8456		1.4819	0	1		+		2447	8640	1176	1187	3134	3134					-0.029264343883710353
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1546813845634	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.436	1	20.436	19.936	20.936	0								0	0	0	1.0178	1	8496	8496		1.4819	0	1		+		2448	8640	1176	1187	3135	3135					-0.029264343883710353
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547729372978	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.81	1	20.81	20.31	21.31	0								0	0	0	1.0178	1	8652	8652		1.4819	0	1		+		2449	8640	1176	1187	3136	3136					-0.029264343883710353
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547729372978	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.154	1	21.154	20.654	21.654	0								0	0	0	1.0178	1	8795	8795		1.4819	0	1		+		2450	8640	1176	1187	3137	3137					-0.029264343883710353
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548950076103	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.49	1	21.49	20.99	21.99	0								0	0	0	1.0178	1	8937	8937		1.4819	0	1		+		2451	8640	1176	1187	3138	3138					-0.029264343883710353
CKSYHTLT	8	Unmodified	_CKSYHTLT_					0	0	0			REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	REV__ENST00000381161.5_1_X:2748138-2799251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1545593142509	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.693	1	22.693	22.193	23.193	0								0	0	0	1.0178	1	9447	9447		1.4819	0	1		+		2452	8640	1176	1187	3139	3139					-0.029264343883710353
CKVKKGTR	8	Unmodified	_CKVKKGTR_					0	0	0			REV__ENST00000525256.1_1_11:16760235-16769724:+|nuORF	REV__ENST00000525256.1_1_11:16760235-16769724:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1888000369072	3	307.188378	918.543305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.316	1	23.931	23.431	24.431	1.6158								0	0	0	1.0178	1	9312	9312		0.40072	0	1		+		2453	13659	1177	1188	3140	3140					0.08077543873503146
CLFEATLFP	9	Unmodified	_CLFEATLFP_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|286|1|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|286|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7623168826103	2	520.759704	1039.50485	4.5924	0.0023915	-1.0818	-0.00056337	3.5106	0.0018282	520.7591577083358	89.315	0.65685	90.719	90.425	91.081	1.4044					54	20	4	0	0	0	0.20838	1	37646	37646		32.117	7.4431	1	4378100	+		2454	14185	1178	1189	3141	3141					-0.013318065517069044
CLHLKPAI	8	Unmodified	_CLHLKPAI_					0	0	0		tr|A0A553SHX7|A0A553SHX7_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_13815PE=4SV=1	tr|A0A553SHX7|A0A553SHX7_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_13815PE=4SV=1	tr|A0A553SHX7|A0A553SHX7_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_13815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	447.7652160525322	2	447.765123	893.515694	1.5958	0.00071455	-0.3635	-0.00016276	1.2323	0.00055179	447.76477768325645	73.498	0.5818	73.498	73.153	73.734	0					44	18	3	0	0	0	0.89008	1	30609	30609		2.5775	0	1	12503000			2455	16174	1179	1190	3142	3142					0.06467640613232106
CLICVFPRK	9	Unmodified	_CLICVFPRK_					0	0	0		ENST00000368184.7_2_1:157648303-157648486:-|nuORF	ENST00000368184.7_2_1:157648303-157648486:-|nuORF	ENST00000368184.7_2_1:157648303-157648486:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2014037966728	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.969	1	13.068	12.568	13.568	0.09944								0	0	0	0.42693	1	5383	5383		1.0715	0	1				2456	6083	1180	1191	3143	3143					0.04703927832701993
CLICVFPRK	9	Unmodified	_CLICVFPRK_					0	0	0		ENST00000368184.7_2_1:157648303-157648486:-|nuORF	ENST00000368184.7_2_1:157648303-157648486:-|nuORF	ENST00000368184.7_2_1:157648303-157648486:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2021362185478	3	360.201519	1077.58273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.373	1	13.472	12.972	13.972	0.09944								0	0	0	0.42693	1	5549	5549		1.0715	0	1				2457	6083	1180	1191	3144	3144					0.04703927832701993
CLKKKKKKKKK	11	Unmodified	_CLKKKKKKKKK_					0	0	0		chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|14|3|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|3|1|sense;AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|7|2|sense	chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	MSMS	GG20161007_CRH_Patient100_W632_02	4	463.3277465701103	3	463.32677	1386.95848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.19	1	103.38	102.88	103.88	0.18066								0	0	0	0.63775	1	43430	43430		0	0	1				2458	40	1181	1192	3145	3145					0.2804794028602373
CLLRHRLKLST	11	Unmodified	_CLLRHRLKLST_					0	0	0		nc|ENSG00000162670|Q76B58-2|BRINP3;ENSG00000162670|ENST00000367462|BRINP3	nc|ENSG00000162670|Q76B58-2|BRINP3	nc|ENSG00000162670|Q76B58-2|BRINP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	447.2711974978447	3	447.271213	1338.79181	3.413	0.0015265	3.4271	0.0015328	6.8401	0.0030594	447.27165583358874	96.279	0.24303	96.681	96.547	96.79	0.40208					18	7	4	0	0	0	1.0388	1	40497	40497		0.50596	0.051438	1	11522000			2459	3637	1182	1193	3146	3146					0.13596467390311773
CLNRIKSFRY	10	Unmodified	_CLNRIKSFRY_					0	0	0		COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant;ENSG00000132423|ENST00000254759|COQ3	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.5744201540947	3	433.90453	1298.69176	2.088	0.00090601	-1.1535	-0.00050052	0.93452	0.00040549	433.9025706568378	42.1	0.37667	43.44	43.29	43.667	1.3399					17	11	2	0	0	0	0.12556	1	17694	17694		1.9064	0.57673	1	740050			2460	368	1183	1194	3147	3147					0.05436230056534441
CLNRIKSFRY	10	Unmodified	_CLNRIKSFRY_					0	0	0		COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant;ENSG00000132423|ENST00000254759|COQ3	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	433.90453	1298.69176	1.2529	0.00054366	4.5527	0.0019755	5.8057	0.0025191	433.9059804835925	43.746	0.19172	43.746	43.651	43.842	0	0.15302	0.0040038	NaN	1.9064	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	463980			2461	368	1183	1194							0.05436230056534441
CLPCRFQK	8	Unmodified	_CLPCRFQK_					0	0	0			REV__ENSG00000119138|ENST00000377126|KLF9	REV__ENSG00000119138|ENST00000377126|KLF9	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.1705200076103	3	332.170219	993.488827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.982	1	64.982	64.482	65.482	0								0	0	0	1.0178	1	27083	27083		0.45834	0.057624	1		+		2462	9531	1184	1195	3148	3148					-0.008177912695828127
CLPLRLPQRR	10	Unmodified	_CLPLRLPQRR_					0	0	0			REV__ENST00000370267.1_1_1:93811500-93811891:+|nuORF	REV__ENST00000370267.1_1_1:93811500-93811891:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6923400759697	4	313.692121	1250.73938	0.084014	2.6354E-05	0.8978	0.00028163	0.98181	0.00030799	313.6923345218594	28.733	0.81334	30.532	30.206	31.02	1.7987					89	26	5	0	0	0	0.89803	1	12165	12165		0.69767	0.07084	1	20859000	+		2463	12657	1185	1196	3149	3149					0.12403929047354723
CLRERYLKH	9	Unmodified	_CLRERYLKH_					0	0	0			REV__tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	REV__tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3360473513603	2	609.332224	1216.6499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.894	1	97.2	96.7	97.7	0.3062								0	0	0	0.29347	1	40757	40757		19.257	2.1441	1		+		2464	15406	1186	1197	3150	3150					0.05023674367998865
CLVCGDCF	8	Unmodified	_CLVCGDCF_					0	0	0		LPXN|p.F294L|1|0.65|ENSG00000110031|chr11:58528052-58528052|A/T|missense_variant	LPXN|p.F294L|1|0.65|ENSG00000110031|chr11:58528052-58528052|A/T|missense_variant	LPXN|p.F294L|1|0.65|ENSG00000110031|chr11:58528052-58528052|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	859.3152343630791	1	859.314693	858.307417	1.1965	0.0010282	-0.41551	-0.00035705	0.78098	0.00067111	859.3141461800356	102.19	0.1345	102.19	102.1	102.23	0					10	4	3	0	0	0	0.89008	1	42801	42801		2.5775	0	1	15232000			2465	7784	1187	1198	3151	3151					-0.12740472357643284
CLVIKQKYR	9	Unmodified	_CLVIKQKYR_					0	0	0		ENST00000524717.5_1_11:95711383-95711476:-|nuORF	ENST00000524717.5_1_11:95711383-95711476:-|nuORF	ENST00000524717.5_1_11:95711383-95711476:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8447143435478	2	575.841894	1149.66923	1.705	0.00098179	2.4681	0.0014213	4.1731	0.0024031	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.83213	1	31963	31963		2.0598	0.40713	1	3135100			2466	7110	1188	1199	3152	3152					0.10038630658914371
CLVKKLTAA	9	Unmodified	_CLVKKLTAA_					0	0	0			REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.1963073611259	3	316.196651	945.568123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.959	1	14.058	13.558	14.558	0.09944								0	0	0	0.42693	1	5792	5792		1.1933	0	1		+		2467	12384	1189	1200	3153	3153					0.09316178956191834
CLVKKLTAA	9	Unmodified	_CLVKKLTAA_					0	0	0			REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	316.1963378787041	3	316.196651	945.568123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.376	1	14.102	13.602	14.602	0.72639								0	0	0	0.42693	1	5553	5553		1.1933	0	1		+		2468	12384	1189	1200	3154	3154					0.09316178956191834
CLVKKLTAA	9	Unmodified	_CLVKKLTAA_					0	0	0			REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.1956054568291	3	316.196651	945.568123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.705	1	13.493	12.993	13.993	0.78751								0	0	0	0.42693	1	5271	5271		1.1933	0	1		+		2469	12384	1189	1200	3155	3155					0.09316178956191834
CLVKKLTAA	9	Unmodified	_CLVKKLTAA_					0	0	0			REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	REV__ENST00000315368.7_1_4:25411380-25415314:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.1964294314384	3	316.196651	945.568123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.888	1	13.705	13.205	14.205	0.81613								0	0	0	0.42693	1	5345	5345		1.1933	0	1		+		2470	12384	1189	1200	3156	3156					0.09316178956191834
CLWQLETELR	10	Unmodified	_CLWQLETELR_					0	0	0		RLF|p.D850Ifs*31|1|0.07|ENSG00000117000|chr1:40237248-40237248|A/-|frameshift_variant;RLF|p.N1699Tfs*51|1|0.08|ENSG00000117000|chr1:40239797-40239798|-/CAAATGTAAAAAGATATTTGCTTGCAAAT|frameshift_variant;ENSG00000117000|ENST00000372771|RLF	RLF|p.D850Ifs*31|1|0.07|ENSG00000117000|chr1:40237248-40237248|A/-|frameshift_variant	RLF|p.D850Ifs*31|1|0.07|ENSG00000117000|chr1:40237248-40237248|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0451	1	4.7904	4.2904	5.2904	0.74525								0	0	0	0.66254	1	1676	1676		0.15932	0	1				2471	1995	1190	1201	3157	3157					0.010571113458127002
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.6714050173759	3	350.784535	1049.33178	1.3819	0.00048475	-0.4425	-0.00015522	0.93941	0.00032953	350.78444789061786	48.132	1.4829	48.462	47.989	49.472	0.33034					92	48	3	0	0	0	0.11954	1	20513	20513		0.26902	0	1	12357000			2472	2968	1191	1202	3158	3158					-0.19091585461114846
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.1812011599541	3	350.784535	1049.33178	1.3909	0.0004879	-0.25319	-8.8814E-05	1.1377	0.00039909	350.7844708999965	46.847	1.1412	47.177	46.848	47.989	0.33034					90	37	3	0	0	0	0.11954	1	19529	19529		0.26902	0	1	13899000			2473	2968	1191	1202	3159	3159					-0.19091585461114846
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.1815673708916	3	350.784535	1049.33178	0.87053	0.00030537	0.21887	7.6777E-05	1.0894	0.00038214	350.7846693821705	45.407	1.2385	46.773	46.433	47.671	1.3653					76	38	3	0	0	0	0.11954	1	18893	18893		0.26902	0	1	15362000			2474	2968	1191	1202	3160	3160					-0.19091585461114846
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	350.784535	1049.33178	0.73941	0.00025938	-0.0154	-5.4019E-06	0.72401	0.00025397	350.78455784982026	46.82	1.3287	48.203	47.689	49.017	1.3825	-0.12497	0.00029596	NaN	0.26902	69	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10249000			2475	2968	1191	1202							-0.19091585461114846
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	350.784535	1049.33178	1.2332	0.0004326	-0.60654	-0.00021276	0.62668	0.00021983	350.78439490627704	46.349	1.1757	48.319	47.882	49.058	1.9703	-0.0090284	-0.00032613	NaN	0.26902	76	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12191000			2476	2968	1191	1202							-0.19091585461114846
CMDDYTTDS	9	Unmodified	_CMDDYTTDS_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD;ENST00000571796.5_1_17:80869637-80887508:+|nuORF	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	350.784535	1049.33178	1.3056	0.00045797	-0.52246	-0.00018327	0.78309	0.0002747	350.78440347605044	44.952	1.2942	46.912	46.608	47.902	1.9596	0.06962	-0.00027358	NaN	0.26902	82	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20285000			2477	2968	1191	1202							-0.19091585461114846
CNAAFGAH	8	Unmodified	_CNAAFGAH_					0	0	0		ENSG00000103549|ENST00000324685|RNF40;nc|ENSG00000103549|O75150-4|RNF40	ENSG00000103549|ENST00000324685|RNF40	ENSG00000103549|ENST00000324685|RNF40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	395.6668884158134	2	395.66868	789.322807	0.16848	6.6662E-05	-1.0971	-0.0004341	-0.92866	-0.00036744	395.66790954778014	65.223	0.34421	65.223	65.072	65.416	0					17	10	2	0	0	0	0.89176	1	27197	27197		0.79363	0.19213	1	845390			2478	1436	1192	1203	3161	3161					-0.08028101453930958
CNAAFGAH	8	Unmodified	_CNAAFGAH_					0	0	0		ENSG00000103549|ENST00000324685|RNF40;nc|ENSG00000103549|O75150-4|RNF40	ENSG00000103549|ENST00000324685|RNF40	ENSG00000103549|ENST00000324685|RNF40	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	395.66868	789.322807	1.973	0.00078064	-2.9	-0.0011475	-0.92708	-0.00036682	395.6673639641361	65.098	0.22479	65.424	65.323	65.548	0.32689	0.038931	-0.00092945	NaN	0.79363	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	583890			2479	1436	1192	1203							-0.08028101453930958
CNAAFGAH	8	Unmodified	_CNAAFGAH_					0	0	0		ENSG00000103549|ENST00000324685|RNF40;nc|ENSG00000103549|O75150-4|RNF40	ENSG00000103549|ENST00000324685|RNF40	ENSG00000103549|ENST00000324685|RNF40	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	395.66868	789.322807	2.207	0.00087324	-2	-0.00079133	0.20704	8.1919E-05	395.6677073134475	64.102	0.24932	65.509	65.401	65.65	1.4071	0.12365	-0.00021719	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	315690			2480	1436	1192	1203							-0.08028101453930958
CNETFWEF	8	Unmodified	_CNETFWEF_					0	0	0			REV__tr|A0A553SFB0|A0A553SFB0_NIACIRibulokinaseOS=NialliacirculansOX=1397GN=araBPE=3SV=1	REV__tr|A0A553SFB0|A0A553SFB0_NIACIRibulokinaseOS=NialliacirculansOX=1397GN=araBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	537.7508422732353	2	538.213117	1074.41168	1.602	0.00086219	-3.3437	-0.0017996	-1.7418	-0.00093745	538.2110709680215	66.615	0.31816	66.615	66.48	66.798	0					16	9	2	0	0	0	2.3239	1	27754	27754		5.2307	0.90143	1	459710	+		2481	14699	1193	1204	3162	3162					-0.1225473100491854
CNFLYHVLFF	10	Unmodified	_CNFLYHVLFF_					0	0	0			REV__ENST00000261192.11_1_12:24968370-24968541:-|nuORF	REV__ENST00000261192.11_1_12:24968370-24968541:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825866580009	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7425	1	5.4789	4.9789	5.9789	0.73642								0	0	0	0.66254	1	1966	1966		0.15932	0	1		+		2482	12182	1194	1205	3163	3163					-0.012047644693438997
CPAPKGRK	8	Unmodified	_CPAPKGRK_					0	0	0		ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	428.7445861697197	2	428.744722	855.474891	1.3528	0.00057999	-1.8573	-0.00079631	-0.50454	-0.00021632	428.74376208034187	52.06	0.52384	54.032	53.676	54.2	1.9722					29	16	2	0	0	0	0.89008	1	21758	21758		2.5775	0	1	4364400			2483	6473	1195	1206	3164	3164					0.04137299293643082
CPCCPAHCCC	10	Unmodified	_CPCCPAHCCC_					0	0	0		nc|ENSG00000145103|Q86SU0-3|ILDR1;ENST00000460554.1_1_3:121712781-121740924:-|nuORF;nc|ENSG00000145103|Q86SU0-2|ILDR1;nc|ENSG00000145103|Q86SU0-6|ILDR1;ENSG00000145103|ENST00000344209|ILDR1	nc|ENSG00000145103|Q86SU0-3|ILDR1	nc|ENSG00000145103|Q86SU0-3|ILDR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	520.1403686404228	2	520.140889	1038.26722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.462	1	82.743	82.243	83.243	0.2802								0	0	0	0.66264	1	34483	34483		0	0	1				2484	3102	1196	1207	3165	3165					-0.25037801615758326
CPEGYYAD	8	Unmodified	_CPEGYYAD_					0	0	0		nc|ENSG00000099139|Q92824|PCSK5;ENSG00000099139|ENST00000674117|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1727172732353	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.127	1	53.524	53.024	54.024	1.3966								0	0	0	1.0178	1	21824	21824		2.5775	2.5775	1				2485	1200	1197	1208	3166	3166					-0.13422681821703009
CPEGYYAD	8	Unmodified	_CPEGYYAD_					0	0	0		nc|ENSG00000099139|Q92824|PCSK5;ENSG00000099139|ENST00000674117|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1723205447197	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.101	1	55.506	55.006	56.006	1.4048								0	0	0	1.0178	1	22646	22646		2.5775	1.7838	1				2486	1200	1197	1208	3167	3167					-0.13422681821703009
CPEGYYAD	8	Unmodified	_CPEGYYAD_					0	0	0		nc|ENSG00000099139|Q92824|PCSK5;ENSG00000099139|ENST00000674117|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	nc|ENSG00000099139|Q92824|PCSK5	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1731140017509	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.285	1	55.689	55.189	56.189	1.4048								0	0	0	1.0178	1	22722	22722		2.5775	2.5775	1				2487	1200	1197	1208	3168	3168					-0.13422681821703009
CPGKGCGR	8	Unmodified	_CPGKGCGR_					0	0	0			REV__ENST00000542875.1_1_12:68845230-68845422:-|nuORF	REV__ENST00000542875.1_1_12:68845230-68845422:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	389.1122314333916	2	389.178358	776.342163	2.7498	0.0010702	0.83722	0.00032583	3.587	0.001396	389.17913003870916	108.48	0.23705	108.53	108.4	108.64	0.050644					54	13	5	0	0	0	2.3239	1	46574	46574		0	0	1	129700000	+		2488	13791	1198	1209	3169	3169					-0.05495468434662598
CPKIKPLKK	9	Unmodified	_CPKIKPLKK_					0	0	0		ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	352.2333557009697	3	352.231695	1053.67326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.541	1	87.668	87.168	88.168	1.1265								0	0	0	0.42693	1	36470	36470		0.26902	0	1				2489	785	1199	1210	3170	3170					0.14856720152602065
CPKIKPLKK	9	Unmodified	_CPKIKPLKK_					0	0	0		ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	ENSG00000065320|ENST00000173229|NTN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	352.2310974001884	3	352.231695	1053.67326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.656	1	87.756	87.256	88.256	1.1003								0	0	0	0.42693	1	36525	36525		0.26902	0	1				2490	785	1199	1210	3171	3171					0.14856720152602065
CPKRKRIRI	9	Unmodified	_CPKRKRIRI_					0	0	0		ENST00000584570.5_1_17:73030172-73036433:+|nuORF	ENST00000584570.5_1_17:73030172-73036433:+|nuORF	ENST00000584570.5_1_17:73030172-73036433:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3759033083916	2	585.374227	1168.7339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.399	1	17.55	17.05	18.05	0.15093								0	0	0	0.42693	1	7218	7218		0.6015	0.14316	1				2491	7447	1200	1211	3172	3172					0.1562825025557686
CPPAPRRL	8	Unmodified	_CPPAPRRL_					0	0	0		chr8:144791328-144791371|140|57.34|0.09|9.29|-|1|None,RPL8|1	chr8:144791328-144791371|140|57.34|0.09|9.29|-|1|None,RPL8|1	chr8:144791328-144791371|140|57.34|0.09|9.29|-|1|None,RPL8|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.2582885622978	2	455.257997	908.501441	4.3573	0.0019837	1.4079	0.00064097	5.7652	0.0026247	455.25864821004524	91.547	0.40342	92.483	92.245	92.648	0.93623					24	12	3	0	0	0	0.89176	1	38528	38528		0.79363	0	1	1208500			2492	293	1201	1212	3173	3173					0.04352988184973583
CPPCRFLVEAR	11	Unmodified	_CPPCRFLVEAR_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883239626884	3	430.88637	1289.63728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4516	1	3.5535	3.0535	4.0535	0.10199								0	0	0	0.63775	1	1425	1425		0.094841	0.094841	1		+		2493	13422	1202	1213	3174	3174					0.0040489491345852
CPRRPRCTGAW	11	Unmodified	_CPRRPRCTGAW_					0	0	0			REV__ENSG00000273514|ENST00000622588|FOXD4L6	REV__ENSG00000273514|ENST00000622588|FOXD4L6	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8831359744072	3	434.881731	1301.62336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.758	1	40.758	40.258	41.258	0								0	0	0	0.63775	1	17074	17074		0.50596	0.051438	1		+		2494	11535	1203	1214	3175	3175					-0.015383377949774513
CPSCCCACRND	11	Unmodified	_CPSCCCACRND_					0	0	0			REV__ENST00000564313.1_1_16:2141057-2141975:-|nuORF	REV__ENST00000564313.1_1_16:2141057-2141975:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2853271365166	3	392.123735	1173.34937	2.1658	0.00084926	-0.012369	-4.8503E-06	2.1534	0.00084441	392.1239446108298	56.076	1.4143	56.397	55.548	56.962	0.32088					82	47	2	0	0	0	0.14606	1	23252	23252		0	0	1	4334100	+		2495	13922	1204	1215	3176	3176					-0.2303660800309899
CQACCFMEAKK	11	Unmodified	_CQACCFMEAKK_					0	0	0			REV__ENST00000416202.5_1_22:46452795-46453064:+|nuORF	REV__ENST00000416202.5_1_22:46452795-46453064:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.1792480349541	3	421.178057	1260.51234	-0.4017	-0.00016919	-2.0219	-0.00085159	-2.4236	-0.0010208	421.17781484010874	13.298	0.95727	13.298	12.622	13.579	0					111	30	6	0	0	0	0.84946	1	5483	5483		12.856	2.5407	1	24073000	+		2496	12945	1205	1216	3177	3177					-0.10749481609605027
CQAIVKKAI	9	Unmodified	_CQAIVKKAI_					0	0	0		tr|A0A553SLB0|A0A553SLB0_NIACIClassISAM-dependentRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20300PE=4SV=1	tr|A0A553SLB0|A0A553SLB0_NIACIClassISAM-dependentRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20300PE=4SV=1	tr|A0A553SLB0|A0A553SLB0_NIACIClassISAM-dependentRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20300PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2010375857353	3	325.200284	972.579022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	101.97	101.47	102.47	0								0	0	0	0.42693	1	42703	42703		1.0715	0.61312	1				2497	16328	1206	1217	3178	3178					0.09163581330483339
CQQYAQVLLQP	11	Unmodified	_CQQYAQVLLQP_					0	0	0			REV__ENSG00000154920|ENST00000338165|EME1	REV__ENSG00000154920|ENST00000338165|EME1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8892089724541	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.452	1	89.452	88.952	89.952	0								0	0	0	0.63775	1	37390	37390		0.45452	0	1		+		2498	10485	1207	1218	3179	3179					0.010571113458127002
CQWPGAGFV	9	Unmodified	_CQWPGAGFV_					0	0	0		ENST00000391751.7_2_19:54704743-54705095:+|nuORF;ENST00000391752.5_1_19:54704789-54705095:+|nuORF	ENST00000391751.7_2_19:54704743-54705095:+|nuORF	ENST00000391751.7_2_19:54704743-54705095:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1503478884697	3	322.149701	963.427273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.362	1	62.692	62.192	63.192	0.32974								0	0	0	0.42693	1	26128	26128		1.1933	0	1				2499	6249	1208	1219	3180	3180					-0.055903996972119785
CRDWYSSGR	9	Unmodified	_CRDWYSSGR_					0	0	0			REV__ENSG00000100335|ENST00000325301|MIEF1	REV__ENSG00000100335|ENST00000325301|MIEF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	377.2693054080009	3	377.166302	1128.47708	0.08214	3.0981E-05	-2.8697	-0.0010823	-2.7875	-0.0010514	377.1652651402736	12.768	0.58908	12.857	12.586	13.175	0.089381					21	18	2	0	0	0	0.11837	1	5229	5229		4.897	2.3985	1	299770	+		2500	8984	1209	1220	3181	3181					-0.08202316759229689
CREQKRKH	8	Unmodified	_CREQKRKH_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|91|2|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|91|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.7941772341728	2	542.793266	1083.57198	2.0263	0.0010999	0.15614	8.475E-05	2.1824	0.0011846	542.793079031577	90.637	0.461	90.637	90.382	90.843	0					23	14	2	0	0	0	0.89178	1	37903	37903		0.69038	0	1	1185800	+		2501	14317	1210	1221	3182	3182					0.03353661502637806
CREWMEWMSK	10	Unmodified	_CREWMEWMSK_					0	0	0			REV__nc|ENSG00000143365|P51449-2|RORC	REV__nc|ENSG00000143365|P51449-2|RORC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1473571658134	3	462.531487	1384.57263	0.92064	0.00042582	2.7483	0.0012712	3.6689	0.001697	462.5327216085994	16.716	0.37806	16.716	16.5	16.878	0					20	11	2	0	0	0	0.12556	1	6991	6991		0.69767	0	1	315640	+		2502	10204	1211	1222	3183	3183					-0.10427047954863156
CRGRTWADAVR	11	Unmodified	_CRGRTWADAVR_					0	0	0			REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8893615603447	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.08	1	114.23	113.73	114.73	0.14912								0	0	0	0.63775	1	49370	49370		0	0	1		+		2503	12645	1212	1223	3184	3184					0.007887007314820949
CRGRTWADAVR	11	Unmodified	_CRGRTWADAVR_					0	0	0			REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889037966728	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.14	1	115.29	114.79	115.79	0.14976								0	0	0	0.63775	1	49795	49795		0	0	1		+		2504	12645	1212	1223	3185	3185					0.007887007314820949
CRGRTWADAVR	11	Unmodified	_CRGRTWADAVR_					0	0	0			REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8899413943291	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.86	1	117.01	116.51	117.51	0.1558								0	0	0	0.63775	1	50489	50489		0	0	1		+		2505	12645	1212	1223	3186	3186					0.007887007314820949
CRGRTWADAVR	11	Unmodified	_CRGRTWADAVR_					0	0	0			REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889037966728	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.94	1	118.1	117.6	118.6	0.15606								0	0	0	0.63775	1	50931	50931		0	0	1		+		2506	12645	1212	1223	3187	3187					0.007887007314820949
CRGRTWADAVR	11	Unmodified	_CRGRTWADAVR_					0	0	0			REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	REV__ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.65	1	118.81	118.31	119.31	0.16237								0	0	0	0.63775	1	51217	51217		0	0	1		+		2507	12645	1212	1223	3188	3188					0.007887007314820949
CRIKLLVKH	9	Unmodified	_CRIKLLVKH_					0	0	0			REV__nc|ENSG00000136161|O95199-2|RCBTB2	REV__nc|ENSG00000136161|O95199-2|RCBTB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3543578982353	2	555.352428	1108.6903	2.5242	0.0014018	0.070223	3.8998E-05	2.5944	0.0014408	555.3524635252306	86.078	0.55022	86.33	86.006	86.556	0.25227					59	17	4	0	0	0	0.83753	1	36050	36050		1.8442	1.8442	1	103930000	+		2508	9977	1213	1224	3189	3189					0.14030640758414847
CRIKLLVKH	9	Unmodified	_CRIKLLVKH_					0	0	0			REV__nc|ENSG00000136161|O95199-2|RCBTB2	REV__nc|ENSG00000136161|O95199-2|RCBTB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3538085818291	2	555.352428	1108.6903	2.4544	0.001363	-0.30149	-0.00016743	2.1529	0.0011956	555.3521728826457	85.322	0.3821	86.481	86.303	86.685	1.159					47	14	4	0	0	0	0.83753	1	35805	35805		1.8442	1.8442	1	65672000	+		2509	9977	1213	1224	3190	3190					0.14030640758414847
CRRRRRRAMRR	11	Unmodified	_CRRRRRRAMRR_					0	0	0			REV__UTP3|p.W64Lfs*21|1|0.13|ENSG00000132467|chr4:70688867-70688868|-/TA|frameshift_variant	REV__UTP3|p.W64Lfs*21|1|0.13|ENSG00000132467|chr4:70688867-70688868|-/TA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9778930544853	3	524.976022	1571.90624	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.959	1	41.276	40.776	41.776	0.31683								0	0	0	0.63775	1	17213	17213		0.45452	0.37117	1		+		2510	15932	1214	1225	3191	3191					0.14315891443993678
CRYLDEPL	8	Unmodified	_CRYLDEPL_					0	0	0			REV__ENST00000491491.1_1_13:77900653-77900983:-|nuORF	REV__ENST00000491491.1_1_13:77900653-77900983:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	505.2910339236259	2	504.744585	1007.47462	1.0774	0.00054381	-3.4304	-0.0017315	-2.353	-0.0011877	504.7413437556922	80.213	0.29304	81.929	81.848	82.141	1.7167					13	9	2	0	0	0	2.3239	1	33651	33651		5.7604	3.9162	1	753570	+		2511	13431	1215	1226	3192	3192					-0.028821652168971923
CSCNVVPP	8	Unmodified	_CSCNVVPP_					0	0	0			REV__ENST00000469740.1_1_X:6069391-6144719:-|nuORF	REV__ENST00000469740.1_1_X:6069391-6144719:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	818.3625366091728	1	818.353522	817.346245	2.7651	0.0022629	-2.8197	-0.0023075	-0.054538	-4.4631E-05	818.34806169225	105.98	0.10246	106.03	105.98	106.08	0.05455					6	4	2	0	0	0	2.3239	1	45080	45080		2.8892	0.31174	1	10882000	+		2512	13272	1216	1227	3193	3193					-0.06973423731631101
CSGDDDDDNDD	11	Unmodified	_CSGDDDDDNDD_					0	0	0		ENST00000322002.4_1_2:5834175-5834352:+|nuORF	ENST00000322002.4_1_2:5834175-5834352:+|nuORF	ENST00000322002.4_1_2:5834175-5834352:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	593.1605712771416	2	593.159661	1184.30477	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.581	1	58.905	58.405	59.405	0.32435								0	0	0	0.63775	1	24552	24552		0.30703	0.30703	1				2513	5851	1217	1228	3194	3194					-0.28001022538592224
CSGDHQACC	9	Unmodified	_CSGDHQACC_					0	0	0		FOXD4L5|p.S357G|1|0.14|ENSG00000204779|chr9:65283309-65283309|T/C|missense_variant	FOXD4L5|p.S357G|1|0.14|ENSG00000204779|chr9:65283309-65283309|T/C|missense_variant	FOXD4L5|p.S357G|1|0.14|ENSG00000204779|chr9:65283309-65283309|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1448547244072	2	462.143855	922.273156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.372	1	73.702	73.202	74.202	1.3297								0	0	0	0.42693	1	30374	30374		0.52476	0.52476	1				2514	7585	1218	1229	3195	3195					-0.19108920516555372
CSGSGDSG	8	Unmodified	_CSGSGDSG_					0	0	0		FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant;FLG2|p.V1226*|1|0.1|ENSG00000143520|chr1:152354111-152354111|T/-|frameshift_variant;FLG2|p.G1336Yfs*14|1|0.06|ENSG00000143520|chr1:152353790-152353791|-/GGTCTGTGTG|frameshift_variant;FLG2|p.Q1366Rfs*21|1|0.03|ENSG00000143520|chr1:152353689-152353690|-/C|frameshift_variant;FLG2|p.K1283Tfs*255|1|0.02|ENSG00000143520|chr1:152353940-152353941|-/GAGTG|frameshift_variant;FLG2|p.E1381Gfs*158|1|0.03|ENSG00000143520|chr1:152353644-152353645|-/CTTGGATC|frameshift_variant;FLG2|p.Q1698Dfs*22|1|0.02|ENSG00000143520|chr1:152352694-152352695|-/TCCATGAGTAGTTCCGTGTC|frameshift_variant;FLG2|p.I2147Tfs*10|1|0.05|ENSG00000143520|chr1:152351346-152351347|-/G|frameshift_variant;ENSG00000143520|ENST00000388718|FLG2;CON__Q5D862	FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant	FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	335.1110412478447	2	335.110861	668.207169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.117	1	18.42	17.92	18.92	1.3023								0	0	0	1.0178	1	7111	7111		0.69038	0	1			+	2515	361	1219	1230	3196	3196					-0.14020670095442256
CSGSGDSG	8	Unmodified	_CSGSGDSG_					0	0	0		FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant;FLG2|p.V1226*|1|0.1|ENSG00000143520|chr1:152354111-152354111|T/-|frameshift_variant;FLG2|p.G1336Yfs*14|1|0.06|ENSG00000143520|chr1:152353790-152353791|-/GGTCTGTGTG|frameshift_variant;FLG2|p.Q1366Rfs*21|1|0.03|ENSG00000143520|chr1:152353689-152353690|-/C|frameshift_variant;FLG2|p.K1283Tfs*255|1|0.02|ENSG00000143520|chr1:152353940-152353941|-/GAGTG|frameshift_variant;FLG2|p.E1381Gfs*158|1|0.03|ENSG00000143520|chr1:152353644-152353645|-/CTTGGATC|frameshift_variant;FLG2|p.Q1698Dfs*22|1|0.02|ENSG00000143520|chr1:152352694-152352695|-/TCCATGAGTAGTTCCGTGTC|frameshift_variant;FLG2|p.I2147Tfs*10|1|0.05|ENSG00000143520|chr1:152351346-152351347|-/G|frameshift_variant;ENSG00000143520|ENST00000388718|FLG2;CON__Q5D862	FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant	FLG2|p.Q1155Hfs*64|1|0.29|ENSG00000143520|chr1:152354297-152354321|TGATTGACTGGAGCCAGTACCATGT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	335.1106140017509	2	335.110861	668.207169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.316	1	18.619	18.119	19.119	1.3023								0	0	0	1.0178	1	7193	7193		0.69038	0	1			+	2516	361	1219	1230	3197	3197					-0.14020670095442256
CSKKALVF	8	Unmodified	_CSKKALVF_					0	0	0		nc|ENSG00000187741|O15360-3|FANCA;ENSG00000187741|ENST00000389301|FANCA;FANCA|p.E886Rfs*3|1|0.09|ENSG00000187741|chr16:89765012-89765012|C/-|frameshift_variant	nc|ENSG00000187741|O15360-3|FANCA	nc|ENSG00000187741|O15360-3|FANCA	MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2602416872978	2	448.257131	894.499709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.52	1	68.842	68.342	69.342	0.32224								0	0	0	1.0178	1	28682	28682		2.3027	0	1				2517	4835	1220	1231	3198	3198					0.04823934376338457
CSMKRLKK	8	Unmodified	_CSMKRLKK_					0	0	0			REV__tr|A0A7D6VMC3|A0A7D6VMC3_9CLOTDUF5105domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13075PE=4SV=1	REV__tr|A0A7D6VMC3|A0A7D6VMC3_9CLOTDUF5105domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13075PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	993.5754272341728	1	993.569603	992.562326	4.4622	0.0044335	1.7505	0.0017392	6.2127	0.0061727	993.5707433169197	107.66	0.14581	107.82	107.72	107.86	0.15781					20	7	4	0	0	0	0.89178	1	46363	46363		0.69038	0.69038	1	97611000	+		2518	15314	1221	1232	3199	3199					0.06574757172882073
CSPTGQMCGAW	11	Unmodified	_CSPTGQMCGAW_					0	0	0			REV__ENST00000414990.2_3_7:143298660-143300142:+|nuORF	REV__ENST00000414990.2_3_7:143298660-143300142:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.7167846560478	2	570.717187	1139.41982	2.3654	0.00135	-2.5133	-0.0014344	-0.14783	-8.437E-05	570.7157598376725	78.539	0.46716	80.274	80.07	80.537	1.735					74	14	8	0	0	0	0.91768	1	32920	32920		8.7454	0.83525	1	11254000	+		2519	12937	1222	1233	3200	3200					-0.1443124335144148
CSRSFRIHER	10	Unmodified	_CSRSFRIHER_					0	0	0		ENSG00000242852|ENST00000397732|ZNF709	ENSG00000242852|ENST00000397732|ZNF709	ENSG00000242852|ENST00000397732|ZNF709	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883544802666	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.221	1	9.2988	8.7988	9.7988	0.077807								0	0	0	0.6623	1	3820	3820		0.56317	0.15491	1				2520	5348	1223	1234	3201	3201					0.007887007315048322
CSYPLEYLVNN	11	Unmodified	_CSYPLEYLVNN_					0	0	0		ENSG00000170044|ENST00000466937|ZPLD1;nc|ENSG00000170044|Q8TCW7-2|ZPLD1	ENSG00000170044|ENST00000466937|ZPLD1	ENSG00000170044|ENST00000466937|ZPLD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.8064453005791	2	657.805371	1313.59619	1.8592	0.001223	-2.2767	-0.0014976	-0.41747	-0.00027461	657.8041435155853	68.884	0.41201	70.25	70.06	70.472	1.3657					21	12	2	0	0	0	0.84637	1	28870	28870		13.042	2.9685	1	2102200			2521	4127	1224	1235	3202	3202					-0.048065876450209544
CTCAACCDD	9	Unmodified	_CTCAACCDD_					0	0	0		nc|ENSG00000177030|O75398-4|DEAF1;nc|ENSG00000177030|O75398-3|DEAF1;ENSG00000177030|ENST00000382409|DEAF1	nc|ENSG00000177030|O75398-4|DEAF1	nc|ENSG00000177030|O75398-4|DEAF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.0805236697197	3	302.081641	903.223095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.124	1	55.124	54.624	55.624	0								0	0	0	0.42693	1	22965	22965		0	0	1				2522	4429	1225	1236	3203	3203					-0.23238791236735779
CTCNGDSGGP	10	Unmodified	_CTCNGDSGGP_					0	0	0		ENSG00000215704|ENST00000375910|CELA2B	ENSG00000215704|ENST00000375910|CELA2B	ENSG00000215704|ENST00000375910|CELA2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1071349978447	3	304.105832	909.295666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.462	1	74.78	74.28	75.28	1.318								0	0	0	0.66254	1	30829	30829		0.15932	0.15932	1				2523	5259	1226	1237	3204	3204					-0.16260997847268754
CTEWDMFK	8	Unmodified	_CTEWDMFK_					0	0	0		nc|ENSG00000109814|O60701-3|UGDH;nc|ENSG00000109814|O60701-2|UGDH;ENSG00000109814|ENST00000316423|UGDH	nc|ENSG00000109814|O60701-3|UGDH	nc|ENSG00000109814|O60701-3|UGDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2165405154228	2	530.217346	1058.42014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.405	1	58.405	57.905	58.905	0								0	0	0	1.0178	1	24363	24363		5.2307	0.47466	1				2524	1681	1227	1238	3205	3205					-0.10673500359962418
CTEWDMFK	8	Unmodified	_CTEWDMFK_					0	0	0		nc|ENSG00000109814|O60701-3|UGDH;nc|ENSG00000109814|O60701-2|UGDH;ENSG00000109814|ENST00000316423|UGDH	nc|ENSG00000109814|O60701-3|UGDH	nc|ENSG00000109814|O60701-3|UGDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	530.2160522341728	2	530.217346	1058.42014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.813	1	27.075	26.575	27.575	0.26173								0	0	0	1.0178	1	11211	11211		9.3474	1.4373	1				2525	1681	1227	1238	3206	3206					-0.10673500359962418
CTYRQPII	8	Unmodified	_CTYRQPII_					0	0	0			REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2632629275322	2	497.262945	992.511337	1.3821	0.00068728	0.0052711	2.6211E-06	1.3874	0.0006899	497.2630940869852	24.384	0.54768	25.625	25.424	25.971	1.241					32	17	2	0	0	0	0.5808	2	10215	10162;10215		42.095	13.608	1	8660800	+		2526	12128	1228	1239	3207;3208	3208					0.014781313996763856
CTYRQPII	8	Unmodified	_CTYRQPII_					0	0	0			REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.5770751833916	2	497.262945	992.511337	1.3821	0.00068728	0.0052711	2.6211E-06	1.3874	0.0006899	497.2630940869852	24.384	0.54768	25.625	25.424	25.971	1.241					32	17	2	0	0	0	2.3239	1	10259	10259		26.884	6.0124	1	8660800	+		2527	12128	1228	1239	3209	3209					0.014781313996763856
CTYRQPII	8	Unmodified	_CTYRQPII_					0	0	0			REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2636291384697	2	497.262945	992.511337	0.48811	0.00024272	0.50053	0.0002489	0.98864	0.00049162	497.26313665528426	23.992	0.70424	25.677	25.414	26.118	1.6845					51	22	4	0	0	0	0.5808	3	10050	9961;10007;10050		42.095	13.608	1	10094000	+		2528	12128	1228	1239	3210;3211;3212	3212					0.014781313996763856
CTYRQPII	8	Unmodified	_CTYRQPII_					0	0	0			REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	REV__ENST00000244051.2_1_20:49576777-49576906:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2632324099541	2	497.262945	992.511337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.92	1	26.605	26.105	27.105	1.6845								0	0	0	1.0178	1	10414	10414		4.756	0.42677	1		+		2529	12128	1228	1239	3213	3213					0.014781313996763856
CVEPHWKHRV	10	Unmodified	_CVEPHWKHRV_					0	0	0			REV__ENSG00000177105|ENST00000351018|RHOG	REV__ENSG00000177105|ENST00000351018|RHOG	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0472	1	2.0472	1.5472	2.5472	0								0	0	0	0.66254	1	839	839		0.15932	0	1		+		2530	11206	1229	1240	3214	3214					0.011907902252232816
CVFFHEVDS	9	Unmodified	_CVFFHEVDS_					0	0	0			REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|84|1|anti-sense	REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|84|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.7317993044853	2	541.734217	1081.45388	2.4675	0.0013367	-4.31	-0.0023349	-1.8425	-0.00099813	541.7313232296233	58.384	0.25172	58.707	58.556	58.808	0.32298					12	7	2	0	0	0	0.75267	1	24487	24487		5.2307	0.47466	1	572270	+		2531	14340	1230	1241	3215	3215					-0.08358755596555056
CVFLLILCLW	10	Unmodified	_CVFLLILCLW_					0	0	0		Tigger4_dup106|chr1:206074674-206075604:+|2.263376500711114|0.099917421413694|4.5|421.0|3|1|sense	Tigger4_dup106|chr1:206074674-206075604:+|2.263376500711114|0.099917421413694|4.5|421.0|3|1|sense	Tigger4_dup106|chr1:206074674-206075604:+|2.263376500711114|0.099917421413694|4.5|421.0|3|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8533813357353	2	611.839974	1221.66539	3.0617	0.0018733	-2.7788	-0.0017002	0.28283	0.00017305	612.340930415207	85.112	1.4263	86.708	86.064	87.491	1.5962					277	55	7	0	0	0	0.56346	1	35599	35599		24.674	8.8267	1	138820000			2532	16024	1231	1242	3216	3216					0.0634282484081723
CVKARLACLL	10	Unmodified	_CVKARLACLL_					0	0	0			REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3181640505791	2	545.317197	1088.61984	1.5524	0.00084657	0.13556	7.3924E-05	1.688	0.0009205	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.89803	1	30830	30830		1.6526	0.85899	1	3210400	+		2533	14238	1232	1243	3217	3217					0.07907599378472696
CVKARLACLL	10	Unmodified	_CVKARLACLL_					0	0	0			REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3193237185478	2	545.317197	1088.61984	1.2814	0.00069875	-0.78509	-0.00042813	0.49628	0.00027063	545.3170765480959	70.167	1.6732	70.489	69.344	71.017	0.32224					99	53	3	0	0	0	0.89803	3	29170	29170;29216;29374		1.6526	0.85899	1	2056900	+		2534	14238	1232	1243	3218;3219;3220	3218					0.07907599378472696
CVKKIIQQVLQ	11	Unmodified	_CVKKIIQQVLQ_					0	0	0		ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	650.3962890505791	2	650.39449	1298.77443	2.3072	0.0015006	0.68884	0.00044802	2.996	0.0019486	650.3947838765138	81.483	2.4977	81.483	80.791	83.289	0					178	81	4	0	0	0	1.0366	1	33822	33822		1.1933	0	1	9280600			2535	1192	1233	1244	3221	3221					0.13699127064683125
CVKKIIQQVLQ	11	Unmodified	_CVKKIIQQVLQ_					0	0	0		ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3963500857353	2	650.39449	1298.77443	1.9699	0.0012812	1.2665	0.00082373	3.2364	0.0021049	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0366	2	33867	33867;34297		1.1933	0	1	10064000			2536	1192	1233	1244	3222;3223	3222					0.13699127064683125
CVLCALCL	8	Unmodified	_CVLCALCL_					0	0	0			REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	419.2044860720634	2	419.205195	836.395838	0.69887	0.00029297	-1.4517	-0.00060855	-0.75279	-0.00031557	419.20459439163955	67.207	0.41968	67.207	66.99	67.41	0					24	13	2	0	0	0	0.88958	2	27967	27967;28018		2.8892	0	1	3406000	+		2537	8756	1234	1245	3224;3225	3224					-0.028904320471951905
CVLCALCL	8	Unmodified	_CVLCALCL_					0	0	0			REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	419.205195	836.395838	0.69887	0.00029297	-1.4517	-0.00060855	-0.75279	-0.00031557	419.20459439163955	67.207	0.41968	67.207	66.99	67.41	0	-0.18222	0.00043953	NaN	2.8892	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3406000	+		2538	8756	1234	1245							-0.028904320471951905
CVLCALCL	8	Unmodified	_CVLCALCL_					0	0	0			REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	REV__nc|ENSG00000074855|Q9HCE9-2|ANO8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	419.205195	836.395838	1.7424	0.00073043	-2.9165	-0.0012226	-1.1741	-0.00049218	419.205157652443	65.698	0.27058	67.607	67.496	67.767	1.9085	0.21728	-0.00078858	NaN	2.8892	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	667840	+		2539	8756	1234	1245							-0.028904320471951905
CVLCSCTM	8	Unmodified	_CVLCSCTM_					0	0	0		nc|ENSG00000054938|Q6WN34-4|CHRDL2	nc|ENSG00000054938|Q6WN34-4|CHRDL2	nc|ENSG00000054938|Q6WN34-4|CHRDL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3194457888603	1	859.318064	858.310788	3.1085	0.0026712	-0.48718	-0.00041864	2.6213	0.0022525	859.3171533307253	100.11	0.18173	100.31	100.18	100.36	0.20527					10	5	2	0	0	0	0.89008	1	42089	42089		2.5775	0	1	15361000			2540	7822	1235	1246	3226	3226					-0.12403545575307362
CVLKARIFG	9	Unmodified	_CVLKARIFG_					0	0	0			REV__ENSG00000134452|ENST00000362091|FBH1	REV__ENSG00000134452|ENST00000362091|FBH1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2019225955009	3	336.200395	1005.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.531	1	21.754	21.254	22.254	0.223								0	0	0	0.42693	1	8952	8952		1.1933	0.735	1		+		2541	9908	1236	1247	3227	3227					0.0767900105033732
CVNRDTPNGLK	11	Unmodified	_CVNRDTPNGLK_					0	0	0			REV__nc|ENSG00000124164|O95292-2|VAPB	REV__nc|ENSG00000124164|O95292-2|VAPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2094909548759	3	406.208278	1215.60301	0.88792	0.00036068	1.0884	0.00044211	1.9763	0.00080279	406.20854994869023	90.486	1.0312	90.486	90	91.031	0					44	32	2	0	0	0	0.98969	1	37822	37822		4.4062	0.28952	1	4986400	+		2542	9634	1237	1248	3228	3228					0.00382770026203616
CVPNQYFFAF	10	Unmodified	_CVPNQYFFAF_					0	0	0		ENST00000493551.1_1_2:29383269-29390459:+|nuORF	ENST00000493551.1_1_2:29383269-29390459:+|nuORF	ENST00000493551.1_1_2:29383269-29390459:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.5237304568291	3	412.523315	1234.54812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.708	1	31.99	31.49	32.49	1.2825								0	0	0	0.66141	1	12887	12887		2.086	0	1				2543	6928	1238	1249	3229	3229					-0.059776167744303166
CVQYFTQC	8	Unmodified	_CVQYFTQC_					0	0	0			REV__ENSG00000119927|ENST00000348367|GPAM	REV__ENSG00000119927|ENST00000348367|GPAM	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.1389343142509	3	331.138584	990.393924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.663	1	42.663	42.163	43.163	0								0	0	0	1.0178	1	17854	17854		0.40072	0	1		+		2544	9560	1239	1250	3230	3230					-0.10165769531431579
CVREEPIF	8	Unmodified	_CVREEPIF_					0	0	0			REV__tr|A0A7D6ZKB1|A0A7D6ZKB1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06715PE=4SV=1	REV__tr|A0A7D6ZKB1|A0A7D6ZKB1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7512695193291	2	496.747127	991.479702	2.358	0.0011713	1.9235	0.00095548	4.2814	0.0021268	496.74836869293347	85.146	0.21043	86.305	86.179	86.389	1.159					10	6	2	0	0	0	0.79422	1	35719	35719		21.747	2.3076	1	855100	+		2545	15675	1240	1251	3231	3231					-0.01637861354265624
CWCCGCSCD	9	Unmodified	_CWCCGCSCD_					0	0	0			REV__ENST00000222584.7_1_7:21470186-21470375:+|nuORF	REV__ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.0794250369072	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.69	1	99.69	99.19	100.19	0								0	0	0	0.42693	1	41728	41728		0	0	1		+		2546	12082	1241	1252	3232	3232					-0.27374427388940603
CWDHKEKRA	9	Unmodified	_CWDHKEKRA_					0	0	0		nc|ENSG00000138964|Q9HBI0-4|PARVG;ENST00000453888.7_1_22:44568882-44582522:+|nuORF	nc|ENSG00000138964|Q9HBI0-4|PARVG	nc|ENSG00000138964|Q9HBI0-4|PARVG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2847778201103	3	391.52583	1171.55566	1.7866	0.00069948	-1.5637	-0.00061221	0.2229	8.7272E-05	391.525038596668	54.303	0.25255	56.272	56.096	56.348	1.9684					10	7	2	0	0	0	0.11941	1	22765	22765		0.23584	0	1	874910			2547	6633	1242	1253	3233	3233					-0.023254644541339076
CWECCFNG	8	Unmodified	_CWECCFNG_					0	0	0			REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.1539184451103	2	481.153691	960.292829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1514	1	6.2313	5.7313	6.7313	0.079923								0	0	0	1.0178	1	2544	2544		0	0	1		+		2548	10336	1243	1254	3234	3234					-0.18890544505779872
CWECCFNG	8	Unmodified	_CWECCFNG_					0	0	0			REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.1549255251884	2	481.153691	960.292829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4621	1	6.542	6.042	7.042	0.079923								0	0	0	1.0178	1	2671	2671		0	0	1		+		2549	10336	1243	1254	3235	3235					-0.18890544505779872
CWECCFNG	8	Unmodified	_CWECCFNG_					0	0	0			REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.1540099978447	2	481.153691	960.292829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5683	1	7.6446	7.1446	8.1446	0.07632								0	0	0	1.0178	1	3131	3131		0	0	1		+		2550	10336	1243	1254	3236	3236					-0.18890544505779872
CWECCFNG	8	Unmodified	_CWECCFNG_					0	0	0			REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.1543762087822	2	481.153691	960.292829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0545	1	6.6758	6.1758	7.1758	0.62127								0	0	0	1.0178	1	2500	2500		0	0	1		+		2551	10336	1243	1254	3237	3237					-0.18890544505779872
CWEYSDYNIK	10	Unmodified	_CWEYSDYNIK_					0	0	0		ENSG00000197888|ENST00000317746|UGT2B17	ENSG00000197888|ENST00000317746|UGT2B17	ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.8566467165947	3	440.857023	1319.54924	0.10944	4.825E-05	-2.5374	-0.0011186	-2.428	-0.0010704	440.8563196980084	12.267	0.86546	12.267	11.88	12.746	0					97	27	7	0	0	0	0.88022	1	5211	5211		1.7423	0.41263	1	77527000			2552	5027	1244	1255	3238	3238					-0.09775447196170717
CWNCNDCKAGK	11	Unmodified	_CWNCNDCKAGK_					0	0	0		nc|ENSG00000147548|Q9BZ95-4|NSD3;nc|ENSG00000147548|Q9BZ95-2|NSD3;nc|ENSG00000147548|Q9BZ95-5|NSD3;ENSG00000147548|ENST00000317025|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	nc|ENSG00000147548|Q9BZ95-4|NSD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.5023071169853	3	414.500187	1240.47873	0.87681	0.00036344	3.1479	0.0013048	4.0247	0.0016682	414.5017568921857	27.791	0.46333	29.07	28.813	29.276	1.2789					31	14	3	0	0	0	0.90709	1	11652	11652		4.7159	2.4632	1	1464400			2553	3185	1245	1256	3239	3239					-0.1318876705713592
CWPPKTLG	8	Unmodified	_CWPPKTLG_					0	0	0		FLAM_C_dup2591|chr2:44065272-44065432:-|2.634505608215368|0.3427218874881361|2.94|429.0|9|2|anti-sense	FLAM_C_dup2591|chr2:44065272-44065432:-|2.634505608215368|0.3427218874881361|2.94|429.0|9|2|anti-sense	FLAM_C_dup2591|chr2:44065272-44065432:-|2.634505608215368|0.3427218874881361|2.94|429.0|9|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2321960330009	2	451.233656	900.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.15	1	104.15	103.65	104.65	0								0	0	0	1.0178	1	43903	43903		2.5775	1.7838	1				2554	7583	1246	1257	3240	3240					-0.0014492517478856826
CWWECCVH	8	Unmodified	_CWWECCVH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1903564333916	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.012	1	87.012	86.512	87.512	0								0	0	0	1.0178	1	36307	36307		0	0	1				2555	7022	1247	1258	3241	3241					-0.16294576343443623
CWWECCVH	8	Unmodified	_CWWECCVH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1931030154228	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.868	1	88.868	88.368	89.368	0								0	0	0	1.0178	1	37152	37152		0	0	1				2556	7022	1247	1258	3242	3242					-0.16294576343443623
CWWECCVH	8	Unmodified	_CWWECCVH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1921264529228	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.758	1	89.758	89.258	90.258	0								0	0	0	1.0178	1	37517	37517		0	0	1				2557	7022	1247	1258	3243	3243					-0.16294576343443623
CWWECCVH	8	Unmodified	_CWWECCVH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920654177666	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.404	1	93.404	92.904	93.904	0								0	0	0	1.0178	1	39039	39039		0	0	1				2558	7022	1247	1258	3244	3244					-0.16294576343443623
CWWECCVH	8	Unmodified	_CWWECCVH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1916992068291	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.967	1	47.937	47.437	48.437	1.9703								0	0	0	1.0178	1	19256	19256		0.79363	0	1				2559	7022	1247	1258	3245	3245					-0.16294576343443623
CYATGHNI	8	Unmodified	_CYATGHNI_					0	0	0			REV__nc|ENSG00000185480|Q9NWS1-5|PARPBP	REV__nc|ENSG00000185480|Q9NWS1-5|PARPBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.6947204470634	2	439.694895	877.375237	2.1628	0.00095098	-1.3383	-0.00058846	0.82449	0.00036252	439.6940455343764	71.711	0.28307	72.035	71.848	72.132	0.32359					17	8	3	0	0	0	0.8909	1	29988	29988		2.0598	1.2661	1	742810	+		2560	11466	1248	1259	3246	3246					-0.06835563110985277
CYCEGEESGEG	11	Unmodified	_CYCEGEESGEG_					0	0	0		nc|ENSG00000148362|Q9BUH6-2|PAXX;ENSG00000148362|ENST00000371620|PAXX	nc|ENSG00000148362|Q9BUH6-2|PAXX	nc|ENSG00000148362|Q9BUH6-2|PAXX	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1280090212822	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.383	1	40.696	40.196	41.196	0.31263								0	0	0	0.63775	1	16977	16977		0.094841	0.094841	1				2561	3206	1249	1260	3247	3247					-0.21517101920676396
CYCLQFRQKK	10	Unmodified	_CYCLQFRQKK_					0	0	0		ENST00000454171.1_1_7:84657519-84657798:+|nuORF	ENST00000454171.1_1_7:84657519-84657798:+|nuORF	ENST00000454171.1_1_7:84657519-84657798:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	440.1843749880791	3	439.558254	1315.65293	0.21114	9.2808E-05	0.9764	0.00042919	1.1875	0.00052199	439.5594024392845	12.44	0.12232	13.228	13.152	13.275	0.78751					5	3	2	0	0	0	0.12549	1	5143	5143		3.5871	0.5148	1	377670			2562	6637	1250	1261	3248	3248					0.007731814304861473
CYEDHMDL	8	Unmodified	_CYEDHMDL_					0	0	0		ENST00000487587.2_1_20:43603507-43603681:+|nuORF	ENST00000487587.2_1_20:43603507-43603681:+|nuORF	ENST00000487587.2_1_20:43603507-43603681:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.2826721072197	3	342.461616	1024.36302	2.2066	0.00075568	-1.5103	-0.00051723	0.69627	0.00023845	342.46237913854156	72.464	0.37456	74.274	74.105	74.48	1.8101					49	11	6	0	0	0	2.3239	1	30433	30433		0.40072	0	1	3366000			2563	6880	1251	1262	3249	3249					-0.14818967636324487
CYFLCPCY	8	Unmodified	_CYFLCPCY_					0	0	0			REV__ENST00000436842.5_1_2:3593081-3593171:-|nuORF	REV__ENST00000436842.5_1_2:3593081-3593171:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.1920349001884	2	506.192285	1010.37002	1.8637	0.00094338	-1.813	-0.00091773	0.050677	2.5652E-05	506.19133508117886	40.505	0.36724	40.505	40.363	40.731	0					21	11	2	0	0	0	0.88409	1	16986	16986		6.3541	1.5981	1	1240500	+		2564	13056	1252	1263	3250	3250					-0.13475326289471923
CYFTPHFL	8	Unmodified	_CYFTPHFL_					0	0	0			REV__ENST00000225728.7_1_17:6547635-6547686:-|nuORF	REV__ENST00000225728.7_1_17:6547635-6547686:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2391235232353	2	514.238938	1026.46332	2.8597	0.0014706	-1.4165	-0.00072841	1.4432	0.00074216	514.2381954379947	86.139	0.45294	86.139	85.914	86.367	0					51	14	5	0	0	0	0.88587	1	35951	35951		5.2307	0.47466	1	5910800	+		2565	12088	1253	1264	3251	3251					-0.04884942520379809
CYKHIQDGAF	10	Unmodified	_CYKHIQDGAF_					0	0	0			REV__ENST00000418944.1_1_2:110941632-110941998:+|nuORF	REV__ENST00000418944.1_1_2:110941632-110941998:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5179931521416	3	394.518453	1180.53353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.988	1	30.787	30.287	31.287	1.7987								0	0	0	0.66166	1	12145	12145		0.69767	0	1		+		2566	12963	1254	1265	3252	3252					-0.04951688922574249
CYLFFTQPQR	10	Unmodified	_CYLFFTQPQR_					0	0	0		ZNF527|p.S287L|1|0.1|ENSG00000189164|chr19:37388909-37388909|C/T|missense_variant	ZNF527|p.S287L|1|0.1|ENSG00000189164|chr19:37388909-37388909|C/T|missense_variant	ZNF527|p.S287L|1|0.1|ENSG00000189164|chr19:37388909-37388909|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827392458916	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.68	1	118.84	118.34	119.34	0.16237								0	0	0	0.66254	1	51230	51230		0.15932	0	1				2567	17367	1255	1266	3253	3253					-0.016068539630396117
CYLIWCVKTR	10	Unmodified	_CYLIWCVKTR_					0	0	0			REV__ENST00000472890.5_1_3:149956364-149957874:+|nuORF	REV__ENST00000472890.5_1_3:149956364-149957874:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	428.8917724490166	3	428.891233	1283.65187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.602	1	24.816	24.316	25.316	1.2145								0	0	0	0.66254	1	9869	9869		0.15932	0	1		+		2568	13299	1256	1267	3254	3254					0.021389670615690193
CYNKGVLAK	9	Unmodified	_CYNKGVLAK_					0	0	0			REV__ENST00000555499.1_1_14:75498822-75509100:-|nuORF	REV__ENST00000555499.1_1_14:75498822-75509100:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.2730285525322	2	498.27077	994.526987	1.3941	0.00069466	0.2076	0.00010344	1.6017	0.0007981	498.270728382809	23.64	0.31239	23.876	23.724	24.037	0.23626					16	9	2	0	0	0	0.42305	1	9900	9900		19.257	1.1106	1	777100	+		2569	13865	1257	1268	3255	3255					0.02950417916713377
CYYSGSDS	8	Unmodified	_CYYSGSDS_					0	0	0			REV__nc|ENSG00000143061|O75054-2|IGSF3	REV__nc|ENSG00000143061|O75054-2|IGSF3	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.1526367068291	2	441.152726	880.290898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.423	1	68.423	67.923	68.923	0								0	0	0	1.0178	1	28495	28495		0.79363	0	1		+		2570	14451	1258	1269	3256	3256					-0.15403558718389831
DAFRSCKF	8	Unmodified	_DAFRSCKF_					0	0	0		ENSG00000136457|ENST00000508540|CHAD	ENSG00000136457|ENST00000508540|CHAD	ENSG00000136457|ENST00000508540|CHAD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.9238159060478	2	487.231645	972.448736	1.5336	0.00074721	-0.66194	-0.00032252	0.87165	0.00042469	487.2305608133478	71.32	0.28141	73.144	72.972	73.253	1.824					16	8	2	0	0	0	2.3239	1	29954	29954		8.5933	3.8373	1	1738700			2571	2725	1259	1270	3257	3257					-0.03859014668512373
DAGPCCCCYC	10	Unmodified	_DAGPCCCCYC_					0	0	0		ENST00000220931.10_1_8:102803112-102803181:-|nuORF	ENST00000220931.10_1_8:102803112-102803181:-|nuORF	ENST00000220931.10_1_8:102803112-102803181:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	519.1401244997978	2	519.136326	1036.2581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.804	1	42.129	41.629	42.629	1.3254								0	0	0	0.66237	1	17113	17113		0.45834	0.45834	1				2572	5529	1260	1271	3258	3258					-0.258578717004184
DAGPCCCCYC	10	Unmodified	_DAGPCCCCYC_					0	0	0		ENST00000220931.10_1_8:102803112-102803181:-|nuORF	ENST00000220931.10_1_8:102803112-102803181:-|nuORF	ENST00000220931.10_1_8:102803112-102803181:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	519.1406127810478	2	519.136326	1036.2581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.946	1	42.272	41.772	42.772	1.3254								0	0	0	0.66237	1	17172	17172		0.45834	0.45834	1				2573	5529	1260	1271	3259	3259					-0.258578717004184
DAIAELDTL	9	Unmodified	_DAIAELDTL_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000170027|ENST00000307630|YWHAG;nc|ENSG00000108953|P62258-2|YWHAE;ENSG00000108953|ENST00000264335|YWHAE;YWHAE-SLC43A2|1|fusion;NEO1-YWHAE|1|fusion	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7497436404228	2	480.747847	959.481142	2.4728	0.0011888	-0.27445	-0.00013194	2.1984	0.0010569	480.7476831506458	63.913	0.3533	65.32	65.143	65.497	1.4071					15	10	2	0	0	0	0.19075	1	26804	26804		34.102	5.6156	1	1618400			2574	2359	1261	1272	3260	3260					-0.00021948784524283838
DAIAELDTL	9	Unmodified	_DAIAELDTL_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000170027|ENST00000307630|YWHAG;nc|ENSG00000108953|P62258-2|YWHAE;ENSG00000108953|ENST00000264335|YWHAE;YWHAE-SLC43A2|1|fusion;NEO1-YWHAE|1|fusion	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	480.747847	959.481142	2.5513	0.0012265	-1.3782	-0.00066255	1.1731	0.00056399	480.74715341843876	63.512	0.2859	65.457	65.312	65.598	1.9444	0.068204	-0.00062951	NaN	34.102	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1650600			2575	2359	1261	1272							-0.00021948784524283838
DALKLQDQLKA	11	Unmodified	_DALKLQDQLKA_					0	0	0		nc|ENSG00000154258|Q8IUA7-4|ABCA9;nc|ENSG00000154258|Q8IUA7-3|ABCA9;ENSG00000154258|ENST00000340001|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8581420779228	2	621.856252	1241.69795	1.8264	0.0011358	-0.40064	-0.00024914	1.4258	0.00088663	621.85626712657	47.809	0.24823	49.192	49.111	49.359	1.3825					13	7	2	0	0	0	0.80586	1	20035	20035		15.248	0.8431	1	876810			2576	3379	1262	1273	3261	3261					0.08677026769032636
DALLQEIAL	9	Unmodified	_DALLQEIAL_					0	0	0		ZC3HAV1|p.T321Yfs*20|1|0.07|ENSG00000105939|chr7:139079980-139079981|-/AATTTAAGGATCTGGTAGAAGTTATA|frameshift_variant;nc|ENSG00000105939|Q7Z2W4-3|ZC3HAV1;nc|ENSG00000105939|Q7Z2W4-2|ZC3HAV1;ENSG00000105939|ENST00000242351|ZC3HAV1	ZC3HAV1|p.T321Yfs*20|1|0.07|ENSG00000105939|chr7:139079980-139079981|-/AATTTAAGGATCTGGTAGAAGTTATA|frameshift_variant	ZC3HAV1|p.T321Yfs*20|1|0.07|ENSG00000105939|chr7:139079980-139079981|-/AATTTAAGGATCTGGTAGAAGTTATA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2803527712822	2	493.281857	984.549162	1.7399	0.00085824	-1.3695	-0.00067554	0.37038	0.0001827	493.2808077395617	79.436	0.37076	81.153	80.982	81.353	1.7167					25	11	3	0	0	0	0.22154	2	33311	33311;33363		30.637	3.5669	1	1234500			2577	1547	1263	1274	3262;3263	3262					0.05626920866131968
DAQGFVIEL	9	Unmodified	_DAQGFVIEL_					0	0	0		ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2593566775322	2	496.258382	990.502212	2.485	0.0012332	0.23994	0.00011907	2.7249	0.0013523	496.2583638119749	77.43	0.44453	78.711	78.474	78.918	1.2809					18	13	2	0	0	0	0.66458	1	32550	32550		8.7454	0.15213	1	897610			2578	934	1264	1275	3264	3264					0.006580613149935743
DAQGFVIEL	9	Unmodified	_DAQGFVIEL_					0	0	0		ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	496.258382	990.502212	1.6711	0.00082928	0.80107	0.00039754	2.4721	0.0012268	496.25860950879917	76.985	0.38574	78.737	78.592	78.977	1.7514	0.012654	0.00034286	NaN	8.7454	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1091600			2579	934	1264	1275							0.006580613149935743
DASKLQFIL	9	Unmodified	_DASKLQFIL_					0	0	0		ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3;nc|ENSG00000137100|O75935-3|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7988159060478	2	517.797675	1033.5808	2.7506	0.0014243	-1.5491	-0.00080212	1.2015	0.00062215	517.7963001283726	63.978	0.62592	65.385	65.207	65.833	1.4071					37	19	3	0	0	0	0.053939	1	26878	26878		66.457	18.708	1	5621500			2580	2758	1265	1276	3265	3265					0.06534913620089355
DASKLQFIL	9	Unmodified	_DASKLQFIL_					0	0	0		ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3;nc|ENSG00000137100|O75935-3|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7991210818291	2	517.797675	1033.5808	2.793	0.0014462	-2.1673	-0.0011222	0.62568	0.00032397	517.7961056593324	63.479	0.69031	65.423	65.183	65.874	1.9444					40	21	3	0	0	0	0.063746	1	26668	26668		62.573	10.304	1	5562700			2581	2758	1265	1276	3266	3266					0.06534913620089355
DASKVVTVF	9	Unmodified	_DASKVVTVF_					0	0	0		ENSG00000071127|ENST00000499869|WDR1;SKAP1-WDR1|2|fusion;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;SKAP1-WDR1|1|fusion	ENSG00000071127|ENST00000499869|WDR1	ENSG00000071127|ENST00000499869|WDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2698852419853	2	483.26875	964.522947	2.4172	0.0011681	-0.79869	-0.00038598	1.6185	0.00078217	483.2683160378638	40.474	0.30589	41.785	41.608	41.914	1.3102					16	9	2	0	0	0	0.18809	2	17005	16954;17005		34.402	13.759	1	1446900			2582	865	1266	1277	3267;3268	3268					0.03926651694678185
DASKVVTVF	9	Unmodified	_DASKVVTVF_					0	0	0		ENSG00000071127|ENST00000499869|WDR1;SKAP1-WDR1|2|fusion;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;SKAP1-WDR1|1|fusion	ENSG00000071127|ENST00000499869|WDR1	ENSG00000071127|ENST00000499869|WDR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	483.26875	964.522947	1.7826	0.00086149	-0.21393	-0.00010339	1.5687	0.0007581	483.2684992865499	40.074	0.31355	41.936	41.738	42.051	1.8624	0.075894	0.00012147	NaN	34.402	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1533800			2583	865	1266	1277							0.03926651694678185
DATELNNQ	8	Unmodified	_DATELNNQ_					0	0	0			REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	REV__nc|ENSG00000113971|Q7Z494-2|NPHP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	452.7457153201103	2	452.703971	903.393389	2.2515	0.0010193	-1.9969	-0.00090398	0.25464	0.00011528	452.7028172904062	67.963	0.24533	69.341	69.182	69.427	1.3778					12	7	2	0	0	0	2.3239	1	28465	28465		5.7604	0	1	402760	+		2584	9394	1267	1278	3269	3269					-0.06217149655276444
DAWAVALSTCP	11	Unmodified	_DAWAVALSTCP_					0	0	0		HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2704345583916	2	567.268424	1132.5223	2.1936	0.0012444	2.5085	0.001423	4.7021	0.0026673	567.2693362699436	47.043	0.2847	48.426	48.283	48.567	1.3825					19	8	3	0	0	0	0.42228	1	19721	19721		26.268	7.0112	1	1793300			2585	7651	1268	1279	3270	3270					-0.038665110166903105
DAWAVALSTCP	11	Unmodified	_DAWAVALSTCP_					0	0	0		HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.2698242068291	2	567.268424	1132.5223	1.8355	0.0010412	2.7444	0.0015568	4.5799	0.002598	567.2700134329735	46.588	0.30083	48.558	48.41	48.711	1.9703					22	9	3	0	0	0	0.42228	1	19526	19526		26.268	0.86883	1	1310700			2586	7651	1268	1279	3271	3271					-0.038665110166903105
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1239196658134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.554	1	99.626	99.126	100.13	0.072716								0	0	0	1.0178	1	41683	41683		0	0	1		+		2587	9469	1269	1280	3272	3272					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1233398318291	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.672	1	99.744	99.244	100.24	0.072716								0	0	0	1.0178	1	41734	41734		0	0	1		+		2588	9469	1269	1280	3273	3273					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1238281130791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.79	1	99.863	99.363	100.36	0.072716								0	0	0	1.0178	1	41784	41784		0	0	1		+		2589	9469	1269	1280	3274	3274					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1249267458916	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.921	1	99.994	99.494	100.49	0.072716								0	0	0	1.0178	1	41839	41839		0	0	1		+		2590	9469	1269	1280	3275	3275					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1237975955009	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.04	1	100.12	99.615	100.62	0.072716								0	0	0	1.0178	1	41888	41888		0	0	1		+		2591	9469	1269	1280	3276	3276					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1248657107353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.15	1	100.23	99.725	100.73	0.072716								0	0	0	1.0178	1	41932	41932		0	0	1		+		2592	9469	1269	1280	3277	3277					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1215087771416	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.49	1	100.56	100.06	101.06	0.072716								0	0	0	1.0178	1	42070	42070		0	0	1		+		2593	9469	1269	1280	3278	3278					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1219665408134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.74	1	100.81	100.31	101.31	0.067009								0	0	0	1.0178	1	42178	42178		0	0	1		+		2594	9469	1269	1280	3279	3279					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1225463747978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.86	1	100.92	100.42	101.42	0.067009								0	0	0	1.0178	1	42224	42224		0	0	1		+		2595	9469	1269	1280	3280	3280					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1215392947197	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.96	1	101.02	100.52	101.52	0.067009								0	0	0	1.0178	1	42265	42265		0	0	1		+		2596	9469	1269	1280	3281	3281					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1231567263603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.09	1	101.16	100.66	101.66	0.067009								0	0	0	1.0178	1	42321	42321		0	0	1		+		2597	9469	1269	1280	3282	3282					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1201965212822	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.19	1	101.26	100.76	101.76	0.067009								0	0	0	1.0178	1	42367	42367		0	0	1		+		2598	9469	1269	1280	3283	3283					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1230041384697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.33	1	101.4	100.9	101.9	0.067009								0	0	0	1.0178	1	42425	42425		0	0	1		+		2599	9469	1269	1280	3284	3284					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1218139529228	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.61	1	101.68	101.18	102.18	0.067009								0	0	0	1.0178	1	42544	42544		0	0	1		+		2600	9469	1269	1280	3285	3285					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1225768923759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.73	1	101.79	101.29	102.29	0.067009								0	0	0	1.0178	1	42592	42592		0	0	1		+		2601	9469	1269	1280	3286	3286					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1212951540947	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102	1	102.06	101.56	102.56	0.062805								0	0	0	1.0178	1	42707	42707		0	0	1		+		2602	9469	1269	1280	3287	3287					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1199523806572	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.14	1	102.2	101.7	102.7	0.062805								0	0	0	1.0178	1	42767	42767		0	0	1		+		2603	9469	1269	1280	3288	3288					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1213561892509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.349	1	35.624	35.124	36.124	1.2746								0	0	0	1.0178	1	14419	14419		0	0	1		+		2604	9469	1269	1280	3289	3289					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1240722537041	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.03	1	100.21	99.706	100.71	0.18047								0	0	0	1.0178	1	42097	42097		0	0	1		+		2605	9469	1269	1280	3290	3290					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1238281130791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.14	1	100.32	99.819	100.82	0.18047								0	0	0	1.0178	1	42142	42142		0	0	1		+		2606	9469	1269	1280	3291	3291					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1228820681572	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.26	1	100.44	99.937	100.94	0.18047								0	0	0	1.0178	1	42193	42193		0	0	1		+		2607	9469	1269	1280	3292	3292					-0.22200081866844812
DCCDGDDF	8	Unmodified	_DCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1241332888603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.42	1	100.61	100.11	101.11	0.18047								0	0	0	1.0178	1	42259	42259		0	0	1		+		2608	9469	1269	1280	3293	3293					-0.22200081866844812
DCESATDP	8	Unmodified	_DCESATDP_					0	0	0			REV__ENST00000467011.5_1_4:27022655-27024615:+|nuORF	REV__ENST00000467011.5_1_4:27022655-27024615:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3166686892509	2	419.150183	836.285813	2.5171	0.001055	-2.9194	-0.0012237	-0.40236	-0.00016865	419.14881781033347	44.875	0.53739	46.241	45.993	46.53	1.3653					19	16	2	0	0	0	2.3239	1	18874	18874		0.79363	0	1	1317700	+		2609	9278	1270	1281	3294	3294					-0.13887862581032095
DCGCSGHP	8	Unmodified	_DCGCSGHP_					0	0	0		ENST00000407765.1_1_6:131505690-131506047:-|nuORF	ENST00000407765.1_1_6:131505690-131506047:-|nuORF	ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1291381716728	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.531	1	27.248	26.748	27.748	1.7167								0	0	0	1.0178	1	10674	10674		0.79363	0.79363	1				2610	6370	1271	1282	3295	3295					-0.15364330839281592
DCGDWDDMEK	10	Unmodified	_DCGDWDDMEK_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2105590701103	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.883	1	29.161	28.661	29.661	1.2789								0	0	0	0.6624	1	11684	11684		0.40072	0	1				2611	1777	1272	1283	3296	3296					-0.1913682264973886
DCGDWDDMEK	10	Unmodified	_DCGDWDDMEK_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2089721560478	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.013	1	30.295	29.795	30.795	1.2825								0	0	0	0.6624	1	12167	12167		0.40072	0	1				2612	1777	1272	1283	3297	3297					-0.1913682264973886
DCGDWDDMEK	10	Unmodified	_DCGDWDDMEK_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2095214724541	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.188	1	30.47	29.97	30.97	1.2825								0	0	0	0.66166	1	12242	12242		1.6526	0	1				2613	1777	1272	1283	3298	3298					-0.1913682264973886
DCGDWDDMEK	10	Unmodified	_DCGDWDDMEK_					0	0	0		ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	ENSG00000112297|ENST00000633556|CRYBG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2108032107353	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.759	1	32.042	31.542	32.542	1.2825								0	0	0	0.6624	1	12908	12908		0.40072	0	1				2614	1777	1272	1283	3299	3299					-0.1913682264973886
DCLQQRRGPR	10	Unmodified	_DCLQQRRGPR_					0	0	0		ENST00000333896.5_1_2:54856544-54856598:+|nuORF	ENST00000333896.5_1_2:54856544-54856598:+|nuORF	ENST00000333896.5_1_2:54856544-54856598:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.8245117068291	2	614.820012	1227.62547	2.325	0.0014294	2.9853	0.0018354	5.3103	0.0032649	614.8220756357605	50.834	0.31562	50.834	50.691	51.007	0					17	9	2	0	0	0	0.86446	1	21211	21211		5.2969	1.3525	1	637000			2615	5901	1273	1284	3300	3300					0.0207641421450262
DCNDCGDYEFQ	11	Unmodified	_DCNDCGDYEFQ_					0	0	0			REV__ENSG00000213246|ENST00000225504|SUPT4H1	REV__ENSG00000213246|ENST00000225504|SUPT4H1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.2159301638603	2	654.71081	1307.40707	3.3132	0.0021692	-3.3779	-0.0022116	-0.064696	-4.2357E-05	655.2113182512854	98.532	0.1702	98.76	98.669	98.84	0.22776					19	5	5	0	0	0	1.0366	1	41476	41476		1.1933	0	1	15503000	+		2616	11835	1274	1285	3301	3301					-0.23434028000679064
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.0779296755791	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.787	1	57.787	57.287	58.287	0								0	0	0	0.42693	1	24113	24113		0	0	1				2617	5532	1275	1286	3302	3302					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.0778076052666	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.442	1	71.442	70.942	71.942	0								0	0	0	0.42693	1	29753	29753		0	0	1				2618	5532	1275	1286	3303	3303					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.0771667361259	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.606	1	71.606	71.106	72.106	0								0	0	0	0.42693	1	29820	29820		0	0	1				2619	5532	1275	1286	3304	3304					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.0768310427666	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.989	1	95.989	95.489	96.489	0								0	0	0	0.42693	1	40130	40130		0	0	1				2620	5532	1275	1286	3305	3305					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.0779296755791	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0627	1	1.2098	0.70978	1.7098	0.14703								0	0	0	0.42693	1	438	438		0	0	1				2621	5532	1275	1286	3306	3306					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.0772888064384	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.568	1	49.956	49.456	50.456	1.388								0	0	0	0.42693	1	20331	20331		0	0	1				2622	5532	1275	1286	3307	3307					-0.2737442738895197
DCSCGCCWC	9	Unmodified	_DCSCGCCWC_					0	0	0		ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	ENST00000222584.7_1_7:21470186-21470375:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.0778381228447	3	327.079355	978.216235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.791	1	50.179	49.679	50.679	1.388								0	0	0	0.42693	1	20425	20425		0	0	1				2623	5532	1275	1286	3308	3308					-0.2737442738895197
DDCHFVEK	8	Unmodified	_DDCHFVEK_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MSMS	GG20161007_CRH_Patient100_A02_01	1	496.7106811404228	2	496.710742	991.406931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.283	1	13.283	12.783	13.783	0								0	0	0	1.0178	1	5503	5503		8.5933	0.68312	1				2624	3427	1276	1287	3309	3309					-0.08911615147678731
DDDDDDDEEH	10	Unmodified	_DDDDDDDEEH_					0	0	0			REV__ENSG00000130528|ENST00000252825|HRC	REV__ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1788818240166	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2187	1	6.2187	5.7187	6.7187	0								0	0	0	0.66237	1	2554	2554		0.45834	0	1		+		2625	9788	1277	1288	3310	3310					-0.2571739363240795
DDDDDDDEEH	10	Unmodified	_DDDDDDDEEH_					0	0	0			REV__ENSG00000130528|ENST00000252825|HRC	REV__ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1787597537041	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.381	1	21.381	20.881	21.881	0								0	0	0	0.66237	1	8891	8891		0.45834	0	1		+		2626	9788	1277	1288	3311	3311					-0.2571739363240795
DDDDDDDEEH	10	Unmodified	_DDDDDDDEEH_					0	0	0			REV__ENSG00000130528|ENST00000252825|HRC	REV__ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1801635622978	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.685	1	17.858	17.358	18.358	0.17285								0	0	0	0.66237	1	7339	7339		0.45834	0	1		+		2627	9788	1277	1288	3312	3312					-0.2571739363240795
DDDDQDNS	8	Unmodified	_DDDDQDNS_					0	0	0			REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1452514529228	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.282	1	37.558	37.058	38.058	1.2762								0	0	0	1.0178	1	15231	15231		0.6015	0	1		+		2628	8462	1278	1289	3313	3313					-0.18543503927890015
DDDSPEMYK	9	Unmodified	_DDDSPEMYK_					0	0	0		nc|ENSG00000162614|Q0ZGT2-4|NEXN;nc|ENSG00000162614|Q0ZGT2-3|NEXN;nc|ENSG00000162614|Q0ZGT2-2|NEXN;ENSG00000162614|ENST00000334785|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	nc|ENSG00000162614|Q0ZGT2-4|NEXN	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.2194702029228	2	550.216054	1098.41756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.751	1	88.974	88.474	89.474	0.22359								0	0	0	0.42693	1	37209	37209		0.52476	0.066424	1				2629	3631	1279	1290	3314	3314					-0.12771677283922145
DDDWTHLS	8	Unmodified	_DDDWTHLS_					0	0	0		nc|ENSG00000161011|Q13501-2|SQSTM1;ENSG00000161011|ENST00000389805|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	nc|ENSG00000161011|Q13501-2|SQSTM1	MSMS	GG20161007_CRH_Patient100_A02_01	1	330.1375915408134	3	330.138406	987.393389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.38	1	75.38	74.88	75.88	0								0	0	0	1.0178	1	31382	31382		1.6526	0	1				2630	3586	1280	1291	3315	3315					-0.10081149655275112
DDECFYHLM	9	Unmodified	_DDECFYHLM_					0	0	0			REV__TRIM31|p.F102L|1|0.07|ENSG00000204616|chr6:30112500-30112500|G/C|missense_variant	REV__TRIM31|p.F102L|1|0.07|ENSG00000204616|chr6:30112500-30112500|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.7247192263603	2	586.722992	1171.43143	1.9968	0.0011716	0.37942	0.00022262	2.3762	0.0013942	586.7236688803794	44.987	0.37692	44.987	44.81	45.187	0					23	11	3	0	0	0	0.70108	2	18856	18807;18856		7.2892	2.3922	1	1085700	+		2631	15925	1281	1292	3316;3317	3317					-0.1474272305647446
DDEEEEEEEEC	11	Unmodified	_DDEEEEEEEEC_					0	0	0			REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1465026736259	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.682	1	94.682	94.182	95.182	0								0	0	0	0.63775	1	39571	39571		0	0	1		+		2632	11220	1282	1293	3318	3318					-0.26199061709871785
DDEEEEEEEEC	11	Unmodified	_DDEEEEEEEEC_					0	0	0			REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	REV__ENST00000466850.1_1_3:48964979-48965285:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1439697146416	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.973	1	34.251	33.751	34.751	1.2782								0	0	0	0.63775	1	13827	13827		0	0	1		+		2633	11220	1282	1293	3319	3319					-0.26199061709871785
DDEFEEEL	8	Unmodified	_DDEFEEEL_					0	0	0		tr|A0A7D6VR92|A0A7D6VR92_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18515PE=4SV=1	tr|A0A7D6VR92|A0A7D6VR92_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18515PE=4SV=1	tr|A0A7D6VR92|A0A7D6VR92_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18515PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2025634646416	2	513.200927	1024.3873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.51	1	114.55	114.05	115.05	0.042839								0	0	0	1.0178	1	49290	49290		2.5775	0	1				2634	16825	1283	1294	3320	3320					-0.123917126774586
DDENSVICP	9	Unmodified	_DDENSVICP_					0	0	0			REV__ENST00000438116.2_1_22:40983245-40983449:-|nuORF	REV__ENST00000438116.2_1_22:40983245-40983449:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1388427615166	3	331.139418	990.396426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.233	1	22.807	22.307	23.307	1.5748								0	0	0	0.42693	1	8847	8847		1.1933	0	1		+		2635	13063	1284	1295	3321	3321					-0.0991564259278448
DDEPTIKK	8	Unmodified	_DDEPTIKK_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4;ENST00000483571.5_1_14:60582139-60592559:+|nuORF	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2488891482353	2	473.248015	944.481476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.13	1	105.19	104.69	105.69	0.056801								0	0	0	1.0178	1	44505	44505		0.69038	0.69038	1				2636	2315	1285	1296	3322	3322					0.00701470935348425
DDERQYQDFLE	11	Unmodified	_DDERQYQDFLE_					0	0	0		NMD3|p.E473*|1|0.16|ENSG00000169251|chr3:161250813-161250829|ATGAAGGAGCACCTCGA/-|frameshift_variant;ENSG00000169251|ENST00000351193|NMD3	NMD3|p.E473*|1|0.16|ENSG00000169251|chr3:161250813-161250829|ATGAAGGAGCACCTCGA/-|frameshift_variant	NMD3|p.E473*|1|0.16|ENSG00000169251|chr3:161250813-161250829|ATGAAGGAGCACCTCGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	729.3135253787041	2	729.312603	1456.61065	1.8191	0.0013267	0.06412	4.6763E-05	1.8833	0.0013735	729.3125997318366	39.545	0.43195	39.545	39.328	39.76	0					33	13	3	0	0	0	1.0174	1	16612	16612		2.7352	0	1	2779700			2637	4078	1286	1297	3323	3323					-0.0993884396316389
DDESPEQRAR	10	Unmodified	_DDESPEQRAR_					0	0	0		ENSG00000114439|ENST00000325805|BBX;nc|ENSG00000114439|Q8WY36-2|BBX;nc|ENSG00000114439|Q8WY36-3|BBX	ENSG00000114439|ENST00000325805|BBX	ENSG00000114439|ENST00000325805|BBX	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1809265017509	3	401.518057	1201.53234	1.2561	0.00050435	1.1614	0.00046631	2.4175	0.00097066	401.8527514278637	77.226	0.22344	78.977	78.849	79.073	1.7514					11	6	2	0	0	0	0.12555	1	32409	32409		0.69767	0.69767	1	488040			2638	1865	1287	1298	3324	3324					-0.0603623175775283
DDEYSDDDDM	10	Unmodified	_DDEYSDDDDM_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1;nc|ENSG00000111530|Q86VP6-3|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1839477419853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.308	1	34.308	33.808	34.808	0								0	0	0	0.6624	1	14381	14381		0.40072	0.40072	1				2639	1740	1288	1299	3325	3325					-0.24978377356342207
DDEYSDDDDM	10	Unmodified	_DDEYSDDDDM_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1;nc|ENSG00000111530|Q86VP6-3|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1824828982353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.159	1	26.421	25.921	26.921	0.26173								0	0	0	0.66237	1	10929	10929		0.45834	0	1				2640	1740	1288	1299	3326	3326					-0.24978377356342207
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8415710330009	3	456.841984	1367.50412	0.52521	0.00023994	0.2737	0.00012504	0.79891	0.00036497	456.84226482285834	2.9587	1.3212	2.9587	2.2514	3.5726	0					117	58	3	0	0	0	0.89803	1	1362	1362		0.13989	0	1	974510	+		2641	11726	1289	1300	3327	3327					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8424560427666	3	456.841984	1367.50412	0.52482	0.00023976	0.28422	0.00012984	0.80904	0.0003696	456.84228304719426	3.9691	0.90671	3.9691	3.2565	4.1632	0					70	36	3	0	0	0	0.89803	1	1589	1589		1.5923	0.89462	1	1002800	+		2642	11726	1289	1300	3328	3328					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8423034548759	3	456.841984	1367.50412	0.52279	0.00023883	0.71133	0.00032497	1.2341	0.0005638	456.842278113981	4.5355	0.65651	4.5355	4.1439	4.8004	0					53	28	3	0	0	0	0.89803	2	1785	1785;1870		1.5923	0.37745	1	1469200	+		2643	11726	1289	1300	3329;3330	3329					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8410827517509	3	456.841984	1367.50412	0.52467	0.00023969	-0.17668	-8.0714E-05	0.348	0.00015898	456.84190627707477	7.5179	2.0624	7.5179	5.9918	8.0542	0					165	86	3	0	0	0	0.89803	6	2519	2519;2564;2819;2908;3111;3216		1.5923	0.89462	1	1515600	+		2644	11726	1289	1300	3331;3332;3333;3334;3335;3336	3331					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8423339724541	3	456.841984	1367.50412	0.5252	0.00023993	0.29493	0.00013474	0.82013	0.00037467	456.84232973478106	8.1832	0.94828	8.1832	7.7247	8.673	0					67	40	3	0	0	0	0.89803	1	3303	3303		0.69767	0	1	922220	+		2645	11726	1289	1300	3337	3337					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8432494997978	3	456.841984	1367.50412	0.52718	0.00024084	0.425	0.00019416	0.95219	0.000435	456.84266173778974	9.8929	3.0695	9.8929	9.4288	12.498	0					233	103	4	0	0	0	0.85995	2	4273	3927;4273		5.7834	1.3773	1	4453300	+		2646	11726	1289	1300	3338;3339	3339					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8424560427666	3	456.841984	1367.50412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7111	1	8.7111	8.2111	9.2111	0								0	0	0	0.66222	1	3584	3584		0.69767	0	1		+		2647	11726	1289	1300	3340	3340					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8421508669853	3	456.841984	1367.50412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1611	1	9.1611	8.6611	9.6611	0								0	0	0	0.66222	1	3771	3771		0.69767	0	1		+		2648	11726	1289	1300	3341	3341					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.8426696658134	3	456.841984	1367.50412	0.73444	0.00033553	-0.72007	-0.00032896	0.014374	6.5668E-06	456.8418863360076	9.9718	1.277	10.05	9.5609	10.838	0.077971					109	47	3	0	0	0	0.89803	1	3998	3998		0.69767	0	1	1303400	+		2649	11726	1289	1300	3342	3342					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.8411132693291	3	456.841984	1367.50412	-0.17101	-7.8126E-05	0.26799	0.00012243	0.096978	4.4304E-05	456.841967260779	10.024	1.2845	10.675	10.176	11.46	0.65058					94	45	3	0	0	0	0.89803	3	4045	4045;4352;4429		0.69767	0	1	1187100	+		2650	11726	1289	1300	3343;3344;3345	3343					-0.16493019248378005
DDEYYDEEYK	10	Unmodified	_DDEYYDEEYK_					0	0	0			REV__ENSG00000198700|ENST00000361565|IPO9	REV__ENSG00000198700|ENST00000361565|IPO9	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.8422119021416	3	456.841984	1367.50412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.131	1	11.801	11.301	12.301	0.66934								0	0	0	0.66222	1	4626	4626		0.69767	0	1		+		2651	11726	1289	1300	3346	3346					-0.16493019248378005
DDFEEQPFEFD	11	Unmodified	_DDFEEQPFEFD_					0	0	0			REV__ENSG00000120242|ENST00000380205|IFNA8	REV__ENSG00000120242|ENST00000380205|IFNA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	709.7764770388603	2	709.275155	1416.53576	0.64136	0.0004549	1.8111	0.0012846	2.4525	0.0017395	709.2771010612815	11.626	1.0795	11.626	11.109	12.188	0					61	34	2	0	0	0	1.0362	1	4943	4943		1.3295	0.13619	1	1039800	+		2652	9566	1290	1301	3347	3347					-0.1558502649440925
DDFEEQPFEFD	11	Unmodified	_DDFEEQPFEFD_					0	0	0			REV__ENSG00000120242|ENST00000380205|IFNA8	REV__ENSG00000120242|ENST00000380205|IFNA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	709.2775756716728	2	709.275155	1416.53576	-0.80029	-0.00056763	2.4451	0.0017342	1.6448	0.0011666	709.2771147453311	11.459	0.74926	12.129	11.829	12.578	0.66934					42	23	3	0	0	0	1.0362	1	4718	4718		1.3295	0	1	794520	+		2653	9566	1290	1301	3348	3348					-0.1558502649440925
DDFGECCC	8	Unmodified	_DDFGECCC_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MSMS	GG20161007_CRH_Patient100_A02_02	2	446.1221801638603	2	446.119514	890.224475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.822	1	75.147	74.647	75.647	0.32464								0	0	0	1.0178	1	31296	31296		0	0	1				2654	1516	1291	1302	3349	3349					-0.22502833876319528
DDFGECCC	8	Unmodified	_DDFGECCC_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MSMS	GG20161007_CRH_Patient100_A02_02	2	446.1214172244072	2	446.119514	890.224475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.041	1	76.362	75.862	76.862	0.32163								0	0	0	1.0178	1	31801	31801		0	0	1				2655	1516	1291	1302	3350	3350					-0.22502833876319528
DDFGECCC	8	Unmodified	_DDFGECCC_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MSMS	GG20161007_CRH_Patient100_W632_02	4	446.1219360232353	2	446.119514	890.224475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.752	1	44.673	44.173	45.173	1.9211								0	0	0	1.0178	1	17916	17916		0	0	1				2656	1516	1291	1302	3351	3351					-0.22502833876319528
DDFGECCC	8	Unmodified	_DDFGECCC_					0	0	0		ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	ENSG00000105427|ENST00000222032|CNFN	MSMS	GG20161007_CRH_Patient100_W632_02	4	446.1216308474541	2	446.119514	890.224475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.857	1	44.778	44.278	45.278	1.9211								0	0	0	1.0178	1	17963	17963		0	0	1				2657	1516	1291	1302	3352	3352					-0.22502833876319528
DDFWRMIWEQ	10	Unmodified	_DDFWRMIWEQ_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	713.3193847537041	2	713.316437	1424.61832	2.1633	0.0015431	1.3994	0.00099822	3.5627	0.0025413	713.3175721864073	51.58	1.0265	51.58	51.292	52.318	0					84	32	4	0	0	0	0.88314	1	21638	21638		3.2813	0.54611	1	5905900			2658	1018	1292	1303	3353	3353					-0.07700363176581959
DDFWRMIWEQ	10	Unmodified	_DDFWRMIWEQ_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.3192016482353	2	713.316437	1424.61832	1.6694	0.0011908	2.4252	0.0017299	4.0946	0.0029208	713.3182023195378	51.168	0.52963	51.496	51.323	51.853	0.32824					35	16	3	0	0	0	0.88314	1	21518	21518		3.2813	0.54611	1	2376300			2659	1018	1292	1303	3354	3354					-0.07700363176581959
DDGDDDDDDD	10	Unmodified	_DDGDDDDDDD_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.1000854372978	3	371.098782	1110.27452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.75	1	102.92	102.42	103.42	0.16445								0	0	0	0.66264	1	43280	43280		0	0	1		+		2660	9209	1293	1304	3355	3355					-0.2762105793210594
DDGDDDDDDD	10	Unmodified	_DDGDDDDDDD_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.1009704470634	3	371.098782	1110.27452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.86	1	103.03	102.53	103.53	0.16445								0	0	0	0.66264	1	43332	43332		0	0	1		+		2661	9209	1293	1304	3356	3356					-0.2762105793210594
DDKRLPVFP	9	Unmodified	_DDKRLPVFP_					0	0	0			REV__ENST00000381295.6_1_4:56720092-56724536:+|nuORF	REV__ENST00000381295.6_1_4:56720092-56724536:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2533141970634	3	362.869591	1085.58694	0.9109	0.00033054	1.9984	0.00072515	2.9093	0.0010557	362.87031488371775	30.451	0.47029	30.737	30.469	30.939	0.2859					21	15	2	0	0	0	0.11941	1	12747	12747		0.23584	0	1	598910	+		2662	12772	1294	1305	3357	3357					0.04757431851612637
DDMDEEDM	8	Unmodified	_DDMDEEDM_					0	0	0			REV__ENSG00000146648|ENST00000275493|EGFR	REV__ENSG00000146648|ENST00000275493|EGFR	MSMS	GG20161007_CRH_Patient100_A02_01	1	500.1522094607353	2	500.149523	998.284492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.873	1	56.873	56.373	57.373	0								0	0	0	1.0178	1	23726	23726		0	0	1		+		2663	10308	1295	1306	3358	3358					-0.2147186473207512
DDMDPTPE	8	Unmodified	_DDMDPTPE_					0	0	0		ENSG00000184619|ENST00000396267|KRBA2;nc|ENSG00000184619|Q6ZNG9|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	307.1154357790947	3	307.116502	918.327678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.048	1	32.048	31.548	32.548	0								0	0	0	1.0178	1	13425	13425		0.40072	0	1				2664	4699	1296	1307	3359	3359					-0.1347530689248515
DDMDPTPE	8	Unmodified	_DDMDPTPE_					0	0	0		ENSG00000184619|ENST00000396267|KRBA2;nc|ENSG00000184619|Q6ZNG9|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	ENSG00000184619|ENST00000396267|KRBA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	307.1152831912041	3	307.116502	918.327678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.456	1	32.456	31.956	32.956	0								0	0	0	1.0178	1	13597	13597		0.40072	0	1				2665	4699	1296	1307	3360	3360					-0.1347530689248515
DDNDDDDDGSC	11	Unmodified	_DDNDDDDDGSC_					0	0	0			REV__ENST00000322002.4_1_2:5834175-5834352:+|nuORF	REV__ENST00000322002.4_1_2:5834175-5834352:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.1584960818291	2	593.159661	1184.30477	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.638	1	26.638	26.138	27.138	0								0	0	0	0.63775	1	11129	11129		0.30703	0.30703	1		+		2666	12411	1297	1308	3361	3361					-0.28001022538569487
DDNPNLPR	8	Unmodified	_DDNPNLPR_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-3|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7278930544853	2	470.727781	939.441008	0.28336	0.00013339	0.33475	0.00015757	0.61811	0.00029096	470.72808374586964	14.755	0.29538	15.524	15.41	15.705	0.76937					12	9	2	0	0	0	0.73597	1	6147	6147		26.884	18.29	1	484110		+	2667	340	1298	1309	3362	3362					-0.03113450664420725
DDNPNLPR	8	Unmodified	_DDNPNLPR_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-3|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7270080447197	2	470.727781	939.441008	0.54852	0.0002582	0.28467	0.000134	0.83319	0.00039221	470.7281472349373	14.674	0.23457	15.571	15.475	15.709	0.89664					12	7	2	0	0	0	0.62338	1	6097	6097		37.974	24.466	1	665530		+	2668	340	1298	1309	3363	3363					-0.03113450664420725
DDNPNLPR	8	Unmodified	_DDNPNLPR_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-3|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	470.727781	939.441008	1.0925	0.00051428	2.3285	0.0010961	3.421	0.0016104	470.7279625144265	15.281	0.18797	15.281	15.186	15.374	0	-0.17736	0.0016514	NaN	37.974	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217980		+	2669	340	1298	1309							-0.03113450664420725
DDPDDGPV	8	Unmodified	_DDPDDGPV_					0	0	0		nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;nc|ENSG00000169682|Q9H2V7-5|SPNS1;ENST00000568900.5_1_16:28986322-28990816:+|nuORF;ENST00000569969.5_2_16:28986191-28992937:+|nuORF;SPNS1|p.R353Pfs*3|1|0.51|ENSG00000169682|chr16:28982442-28982443|-/C|frameshift_variant	nc|ENSG00000169682|Q9H2V7-3|SPNS1	nc|ENSG00000169682|Q9H2V7-3|SPNS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	415.1658813357353	2	415.164148	828.313742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.151	1	49.126	48.626	49.626	1.976								0	0	0	1.0178	1	19747	19747		2.8892	0	1				2670	4105	1299	1310	3364	3364					-0.10728216329266616
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0912353396416	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.728	1	31.01	30.51	31.51	1.2825								0	0	0	1.0178	1	12473	12473		0.40072	0.1317	1				2671	2768	1300	1311	3365	3365					-0.2289177005578722
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0916320681572	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.848	1	31.13	30.63	31.63	1.2825								0	0	0	1.0178	1	12524	12524		0.40072	0.1317	1				2672	2768	1300	1311	3366	3366					-0.2289177005578722
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0916625857353	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.038	1	31.32	30.82	31.82	1.2825								0	0	0	1.0178	1	12605	12605		0.40072	0.1317	1				2673	2768	1300	1311	3367	3367					-0.2289177005578722
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0910522341728	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.217	1	31.5	31	32	1.2825								0	0	0	1.0178	1	12681	12681		0.40072	0.1317	1				2674	2768	1300	1311	3368	3368					-0.2289177005578722
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0910827517509	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.376	1	31.658	31.158	32.158	1.2825								0	0	0	1.0178	1	12747	12747		0.40072	0.1317	1				2675	2768	1300	1311	3369	3369					-0.2289177005578722
DDQMCDEC	8	Unmodified	_DDQMCDEC_					0	0	0		nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000137449|Q7Z5Q1-7|CPEB2;nc|ENSG00000137449|Q7Z5Q1-5|CPEB2;nc|ENSG00000137449|Q7Z5Q1-4|CPEB2;nc|ENSG00000137449|Q7Z5Q1-6|CPEB2;nc|ENSG00000137449|Q7Z5Q1-3|CPEB2;nc|ENSG00000137449|Q7Z5Q1|CPEB2;nc|ENSG00000107864|Q8NE35-2|CPEB3;ENSG00000107864|ENST00000265997|CPEB3	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	nc|ENSG00000137449|Q7Z5Q1-8|CPEB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.0895568728447	3	320.091082	957.251418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.501	1	31.783	31.283	32.283	1.2825								0	0	0	1.0178	1	12800	12800		0.40072	0.1317	1				2676	2768	1300	1311	3370	3370					-0.2289177005578722
DDQVKKIDKY	10	Unmodified	_DDQVKKIDKY_					0	0	0		ENSG00000156515|ENST00000359426|HK1	ENSG00000156515|ENST00000359426|HK1	ENSG00000156515|ENST00000359426|HK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.8912231326103	3	417.890832	1250.65067	1.4229	0.00059464	0.41904	0.00017511	1.842	0.00076975	417.8907498257099	30.801	0.41439	31.087	30.939	31.353	0.2859					40	13	4	0	0	0	0.89803	1	12918	12918		0.77653	0	1	2081800			2677	3451	1301	1312	3371	3371					0.035367474980375846
DDTLRSAWL	9	Unmodified	_DDTLRSAWL_					0	0	0			REV__ENSG00000153060|ENST00000283025|TEKT5	REV__ENSG00000153060|ENST00000283025|TEKT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1076.541064441204	1	1076.5371	1075.52982	2.6538	0.0028569	2.7916	0.0030053	5.4454	0.0058622	1076.5398079177364	76.229	0.75622	77.523	77.006	77.762	1.2938					53	24	4	0	0	0	0.13873	1	31973	31973		39.957	3.4511	1	3375500	+		2678	10440	1302	1313	3372	3372					-0.0049203542478153395
DDTSNFDDFP	10	Unmodified	_DDTSNFDDFP_					0	0	0		ENST00000536093.5_3_12:27468169-27475385:+|nuORF;nc|ENSG00000211455|Q9Y2H1-2|STK38L;ENSG00000211455|ENST00000389032|STK38L	ENST00000536093.5_3_12:27468169-27475385:+|nuORF	ENST00000536093.5_3_12:27468169-27475385:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	586.7255126833916	2	586.722558	1171.43056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.399	1	44.725	44.225	45.225	0.32674								0	0	0	0.65539	1	18642	18642		9.3831	2.66	1				2679	5204	1303	1314	3373	3373					-0.1482952290018602
DDVYFHYHDDK	11	Unmodified	_DDVYFHYHDDK_					0	0	0		tr|A0A553SFN2|A0A553SFN2_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_09225PE=4SV=1	tr|A0A553SFN2|A0A553SFN2_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_09225PE=4SV=1	tr|A0A553SFN2|A0A553SFN2_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_09225PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	485.9676391482353	3	485.205479	1452.59461	0.59244	0.00028745	0.80583	0.00039099	1.3983	0.00067845	485.20577288331634	13.752	0.30871	13.752	13.64	13.949	0					19	9	3	0	0	0	0.14606	1	5656	5656		2.6312	0.54523	1	1769700			2680	16068	1304	1315	3374	3374					-0.11358505409430109
DEAFHSCIVPP	11	Unmodified	_DEAFHSCIVPP_					0	0	0			REV__ENSG00000196268|ENST00000392288|ZNF493	REV__ENSG00000196268|ENST00000392288|ZNF493	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5241882205009	3	405.521863	1213.54376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.714	1	28.461	27.961	28.961	1.747								0	0	0	0.63775	1	11179	11179		1.3296	0.63198	1		+		2681	11623	1305	1316	3375	3375					-0.05447125987984691
DEALEKFDK	9	Unmodified	_DEALEKFDK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	547.5655395388603	2	547.771854	1093.52915	0.47636	0.00026093	0.64824	0.00035509	1.1246	0.00061602	547.7717449830908	19.062	0.31701	19.062	18.92	19.237	0					15	9	2	0	0	0	0.077046	1	7945	7945		51.488	12.873	1	895240		+	2682	339	1306	1317	3376	3376					-0.013868748644881634
DEAPCSPG	8	Unmodified	_DEAPCSPG_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1526367068291	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.901	1	18.074	17.574	18.574	0.17285								0	0	0	1.0178	1	7430	7430		0.69038	0	1		+		2683	11548	1307	1318	3377	3377					-0.11075237510203806
DEAPCSPG	8	Unmodified	_DEAPCSPG_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1514160037041	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.596	1	36.898	36.398	37.398	0.30197								0	0	0	1.0178	1	15390	15390		0.69038	0	1		+		2684	11548	1307	1318	3378	3378					-0.11075237510203806
DEAPCSPG	8	Unmodified	_DEAPCSPG_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1521179080009	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.093	1	37.397	36.897	37.897	0.30497								0	0	0	1.0178	1	15599	15599		0.69038	0	1		+		2685	11548	1307	1318	3379	3379					-0.11075237510203806
DEAPCSPG	8	Unmodified	_DEAPCSPG_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1523925662041	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.007	1	84.652	84.152	85.152	1.6449								0	0	0	1.0178	1	34821	34821		0.69038	0	1		+		2686	11548	1307	1318	3380	3380					-0.11075237510203806
DEARDRRRPKY	11	Unmodified	_DEARDRRRPKY_					0	0	0			REV__ENST00000564704.5_1_16:67289660-67296168:+|nuORF	REV__ENST00000564704.5_1_16:67289660-67296168:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.5646545290947	3	487.927162	1460.75966	0.089317	4.358E-05	-0.79972	-0.0003902	-0.7104	-0.00034662	487.92645526857797	11.733	0.12599	12.521	12.442	12.568	0.78751					5	3	2	0	0	0	0.14606	1	4843	4843		4.7159	1.8726	1	561310	+		2687	13926	1308	1319	3381	3381					0.04770771240896465
DEARDRRRPKY	11	Unmodified	_DEARDRRRPKY_					0	0	0			REV__ENST00000564704.5_1_16:67289660-67296168:+|nuORF	REV__ENST00000564704.5_1_16:67289660-67296168:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	487.927162	1460.75966	-0.20666	-0.00010084	-0.59839	-0.00029197	-0.80505	-0.00039281	487.92675625868986	11.833	0.09271	12.526	12.479	12.572	0.69396	0.0029019	6.9589E-05	NaN	4.7159	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526240	+		2688	13926	1308	1319							0.04770771240896465
DECDPASP	8	Unmodified	_DECDPASP_					0	0	0			REV__ENST00000441493.6_1_22:18270970-18271342:-|nuORF	REV__ENST00000441493.6_1_22:18270970-18271342:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	417.1540405154228	2	417.152726	832.290898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.47	1	102.47	101.97	102.97	0								0	0	0	1.0178	1	42942	42942		5.2307	2.6532	1		+		2689	13087	1309	1320	3382	3382					-0.1319555871839384
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1803466677666	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3236	1	2.3236	1.8236	2.8236	0								0	0	0	0.6624	1	953	953		0.40072	0.40072	1				2690	662	1310	1321	3383	3383					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1872436404228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.909	1	21.909	21.409	22.409	0								0	0	0	0.66264	1	9111	9111		0	0	1				2691	662	1310	1321	3384	3384					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1849243044853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.847	1	43.847	43.347	44.347	0								0	0	0	0.6624	1	18351	18351		0.40072	0.40072	1				2692	662	1310	1321	3385	3385					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1812011599541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.619	1	60.619	60.119	61.119	0								0	0	0	0.66264	1	25279	25279		0	0	1				2693	662	1310	1321	3386	3386					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1872436404228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.365	1	61.365	60.865	61.865	0								0	0	0	0.66264	1	25587	25587		0	0	1				2694	662	1310	1321	3387	3387					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1821777224541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.898	1	62.898	62.398	63.398	0								0	0	0	0.66264	1	26224	26224		0	0	1				2695	662	1310	1321	3388	3388					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1867553591728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.308	1	63.308	62.808	63.808	0								0	0	0	0.66264	1	26393	26393		0	0	1				2696	662	1310	1321	3389	3389					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1863281130791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.464	1	63.464	62.964	63.964	0								0	0	0	0.66264	1	26458	26458		0	0	1				2697	662	1310	1321	3390	3390					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1826049685478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.601	1	63.601	63.101	64.101	0								0	0	0	0.66264	1	26514	26514		0	0	1				2698	662	1310	1321	3391	3391					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1855346560478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.8	1	67.8	67.3	68.3	0								0	0	0	0.66264	1	28239	28239		0	0	1				2699	662	1310	1321	3392	3392					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1804077029228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.179	1	68.179	67.679	68.679	0								0	0	0	0.66264	1	28395	28395		0	0	1				2700	662	1310	1321	3393	3393					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1815063357353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.806	1	73.806	73.306	74.306	0								0	0	0	0.66264	1	30734	30734		0	0	1				2701	662	1310	1321	3394	3394					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1804687380791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.346	1	84.346	83.846	84.846	0								0	0	0	0.66264	1	35150	35150		0	0	1				2702	662	1310	1321	3395	3395					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1807128787041	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3691	1	3.4711	2.9711	3.9711	0.10199								0	0	0	0.66264	1	1391	1391		0	0	1				2703	662	1310	1321	3396	3396					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1830932497978	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.813	1	13.913	13.413	14.413	0.09944								0	0	0	0.66264	1	5732	5732		0	0	1				2704	662	1310	1321	3397	3397					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1807739138603	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.167	1	21.377	20.877	21.877	0.21024								0	0	0	0.6624	1	8795	8795		0.40072	0.40072	1				2705	662	1310	1321	3398	3398					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1848632693291	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.079	1	22.302	21.802	22.802	0.223								0	0	0	0.66264	1	9190	9190		0	0	1				2706	662	1310	1321	3399	3399					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1829711794853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.047	1	33.341	32.841	33.841	0.29431								0	0	0	0.66264	1	13877	13877		0	0	1				2707	662	1310	1321	3400	3400					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1844970583916	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.764	1	39.073	38.573	39.573	0.30857								0	0	0	0.66264	1	16307	16307		0	0	1				2708	662	1310	1321	3401	3401					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1797973513603	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.749	1	46.078	45.578	46.578	0.32899								0	0	0	0.66264	1	19204	19204		0	0	1				2709	662	1310	1321	3402	3402					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1866332888603	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.953	1	46.282	45.782	46.782	0.32899								0	0	0	0.66264	1	19287	19287		0	0	1				2710	662	1310	1321	3403	3403					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1804687380791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.091	1	46.42	45.92	46.92	0.32899								0	0	0	0.66264	1	19344	19344		0	0	1				2711	662	1310	1321	3404	3404					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1821777224541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.211	1	46.54	46.04	47.04	0.32899								0	0	0	0.66264	1	19393	19393		0	0	1				2712	662	1310	1321	3405	3405					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1840698122978	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.268	1	48.598	48.098	49.098	0.33034								0	0	0	0.66264	1	20240	20240		0	0	1				2713	662	1310	1321	3406	3406					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1813842654228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.907	1	50.238	49.738	50.738	0.33019								0	0	0	0.66264	1	20911	20911		0	0	1				2714	662	1310	1321	3407	3407					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1887084841728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.266	1	55.587	55.087	56.087	0.32088								0	0	0	0.66264	1	23140	23140		0	0	1				2715	662	1310	1321	3408	3408					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1862670779228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.421	1	55.742	55.242	56.242	0.32088								0	0	0	0.66264	1	23203	23203		0	0	1				2716	662	1310	1321	3409	3409					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1851074099541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.499	1	58.822	58.322	59.322	0.32298								0	0	0	0.66264	1	24518	24518		0	0	1				2717	662	1310	1321	3410	3410					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1857787966728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.373	1	73.698	73.198	74.198	0.32494								0	0	0	0.66264	1	30699	30699		0	0	1				2718	662	1310	1321	3411	3411					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1799194216728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7571	1	10.408	9.9077	10.908	0.65058								0	0	0	0.66264	1	4056	4056		0	0	1				2719	662	1310	1321	3412	3412					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1863891482353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.117	1	10.767	10.267	11.267	0.65058								0	0	0	0.66264	1	4208	4208		0	0	1				2720	662	1310	1321	3413	3413					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1773559451103	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.398	1	11.06	10.56	11.56	0.6619								0	0	0	0.66264	1	4326	4326		0	0	1				2721	662	1310	1321	3414	3414					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1862060427666	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.773	1	23.988	23.488	24.488	1.2145								0	0	0	0.66264	1	9518	9518		0	0	1				2722	662	1310	1321	3415	3415					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1843749880791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.663	1	45.016	44.516	45.516	1.3536								0	0	0	0.66264	1	18306	18306		0	0	1				2723	662	1310	1321	3416	3416					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1843749880791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.43	1	116.63	116.13	117.13	0.19572								0	0	0	0.66264	1	50386	50386		0	0	1				2724	662	1310	1321	3417	3417					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1841918826103	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.98	1	118.19	117.69	118.69	0.21096								0	0	0	0.66264	1	51009	51009		0	0	1				2725	662	1310	1321	3418	3418					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1869994997978	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.97	1	119.21	118.71	119.71	0.23128								0	0	0	0.66264	1	51413	51413		0	0	1				2726	662	1310	1321	3419	3419					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1865112185478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.35	1	119.59	119.09	120.09	0.23857								0	0	0	0.66264	1	51566	51566		0	0	1				2727	662	1310	1321	3420	3420					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1819335818291	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.855	1	5.5914	5.0914	6.0914	0.73642								0	0	0	0.6624	1	2014	2014		0.40072	0.40072	1				2728	662	1310	1321	3421	3421					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1799804568291	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3838	1	10.128	9.6284	10.628	0.74462								0	0	0	0.66264	1	3905	3905		0	0	1				2729	662	1310	1321	3422	3422					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1795532107353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.673	1	26.358	25.858	26.858	1.6845								0	0	0	0.66264	1	10309	10309		0	0	1				2730	662	1310	1321	3423	3423					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1804687380791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.807	1	26.491	25.991	26.991	1.6845								0	0	0	0.66264	1	10365	10365		0	0	1				2731	662	1310	1321	3424	3424					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1821777224541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.139	1	26.855	26.355	27.355	1.7167								0	0	0	0.66264	1	10508	10508		0	0	1				2732	662	1310	1321	3425	3425					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1855956912041	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.709	1	32.524	32.024	33.024	1.8151								0	0	0	0.66264	1	12872	12872		0	0	1				2733	662	1310	1321	3426	3426					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1849243044853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.92	1	43.839	43.339	44.339	1.9193								0	0	0	0.66264	1	17566	17566		0	0	1				2734	662	1310	1321	3427	3427					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1824218630791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.481	1	47.44	46.94	47.94	1.9596								0	0	0	0.66264	1	19055	19055		0	0	1				2735	662	1310	1321	3428	3428					-0.2497837735631947
DEDDSEYEDC	10	Unmodified	_DEDDSEYEDC_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1849243044853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.012	1	50.989	50.489	51.489	1.9772								0	0	0	0.66264	1	20530	20530		0	0	1				2736	662	1310	1321	3429	3429					-0.2497837735631947
DEDEPDMK	8	Unmodified	_DEDEPDMK_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	489.6967956423759	2	489.689672	977.364791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.6	1	109.75	109.25	110.25	0.15898								0	0	0	1.0178	1	47611	47611		2.5775	0.51773	1				2737	4922	1311	1322	3430	3430					-0.12479635346721807
DEDSDSNSNS	10	Unmodified	_DEDSDSNSNS_					0	0	0			REV__ENSG00000198730|ENST00000361367|CTR9	REV__ENSG00000198730|ENST00000361367|CTR9	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.1229736208916	3	357.123262	1068.34796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.954	1	51.954	51.454	52.454	0								0	0	0	0.66254	1	21668	21668		0.15932	0.15932	1		+		2738	11731	1312	1323	3431	3431					-0.1834846469898821
DEDSTEQK	8	Unmodified	_DEDSTEQK_					0	0	0		tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1992980837822	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.953	1	12.953	12.453	13.453	0								0	0	0	1.0178	1	5365	5365		2.5775	0	1				2739	16290	1313	1324	3432	3432					-0.09429177100355446
DEDSTEQK	8	Unmodified	_DEDSTEQK_					0	0	0		tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	tr|A0A553SKH3|A0A553SKH3_NIACIDUF1510familyproteinOS=NialliacirculansOX=1397GN=CEQ21_18740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1989623904228	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.66	1	13.66	13.16	14.16	0								0	0	0	1.0178	1	5662	5662		2.5775	0	1				2740	16290	1313	1324	3433	3433					-0.09429177100355446
DEEEKYTIRRK	11	Unmodified	_DEEEKYTIRRK_					0	0	0			REV__nc|ENSG00000143450|Q9UMX2-2|OAZ3	REV__nc|ENSG00000143450|Q9UMX2-2|OAZ3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	489.2086364626884	3	489.591445	1465.75251	0.32721	0.0001602	0.59831	0.00029293	0.92552	0.00045313	489.59155496382596	11.865	0.45934	11.865	11.513	11.972	0					24	14	3	0	0	0	0.14606	1	4853	4853		4.4062	3.0765	1	2186800	+		2741	14453	1314	1325	3434	3434					0.03825993849773113
DEESQLCPRF	10	Unmodified	_DEESQLCPRF_					0	0	0			REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	REV__ENST00000531765.2_1_11:67201468-67201970:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5161926150322	3	408.516889	1222.52884	1.4343	0.00058593	-3.3154	-0.0013544	-1.8811	-0.00076847	408.85012488769996	71.204	1.5377	73.028	72.518	74.056	1.824					161	49	5	0	0	0	0.82659	1	29830	29830		5.4027	0	1	5702100	+		2742	11159	1315	1326	3435	3435					-0.07352617855985955
DEEVELIGAEA	11	Unmodified	_DEEVELIGAEA_					0	0	0		tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	587.7772094607353	2	587.777333	1173.54011	1.3794	0.00081076	-1.6623	-0.00097706	-0.28294	-0.00016631	587.7763575455875	29.133	0.82528	29.133	28.628	29.453	0					74	26	4	0	0	0	0.77451	1	12227	12227		16.149	3.1066	1	3260000			2743	17118	1316	1327	3436	3436					-0.03971517280842818
DEEVELIGAEA	11	Unmodified	_DEEVELIGAEA_					0	0	0		tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	587.7769042849541	2	587.777333	1173.54011	0.94889	0.00055773	-1.1704	-0.00068792	-0.22149	-0.00013019	587.776668402452	28.843	0.82115	29.122	28.619	29.441	0.2793					75	26	4	0	0	0	0.77451	1	11998	11998		16.149	3.1066	1	2981700			2744	17118	1316	1327	3437	3437					-0.03971517280842818
DEEVELIGAEA	11	Unmodified	_DEEVELIGAEA_					0	0	0		tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7772094607353	2	587.777333	1173.54011	1.1009	0.00064707	-1.8314	-0.0010765	-0.73053	-0.00042939	587.7765183052592	27.663	0.92168	28.942	28.444	29.366	1.2789					80	29	4	0	0	0	0.58697	3	11625	11522;11625;11663		21.537	4.4241	1	7273400			2745	17118	1316	1327	3438;3439;3440	3439					-0.03971517280842818
DEEVELIGAEA	11	Unmodified	_DEEVELIGAEA_					0	0	0		tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	tr|A0A7D6ZNN1|A0A7D6ZNN1_9CLOTTryptophansynthasebetachainOS=ClostridiumintestinaleOX=36845GN=trpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.7773315310478	2	587.777333	1173.54011	0.69292	0.00040728	-1.3861	-0.00081473	-0.6932	-0.00040745	587.7767737220024	27.255	0.94467	29.002	28.445	29.39	1.747					87	30	4	0	0	0	0.58697	1	11383	11383		21.537	4.4241	1	7043400			2746	17118	1316	1327	3441	3441					-0.03971517280842818
DEFYRWFQKMM	11	Unmodified	_DEFYRWFQKMM_					0	0	0		SYNE3|p.K267Rfs*72|1|0.06|ENSG00000176438|chr14:95455714-95455715|-/C|frameshift_variant;ENST00000555759.1_1_14:95918480-95934190:-|nuORF;SYNE3|p.S490Ffs*56|1|0.23|ENSG00000176438|chr14:95446074-95446075|-/TGACCATTCTGCTTCAGTGTCCTCGTGTGTAAAA|frameshift_variant;nc|ENSG00000176438|Q6ZMZ3-3|SYNE3;SYNE3|p.T871Ifs*3|1|0.04|ENSG00000176438|chr14:95433335-95433336|GG/-|frameshift_variant;nc|ENSG00000176438|Q6ZMZ3-2|SYNE3;ENSG00000176438|ENST00000682763|SYNE3	SYNE3|p.K267Rfs*72|1|0.06|ENSG00000176438|chr14:95455714-95455715|-/C|frameshift_variant	SYNE3|p.K267Rfs*72|1|0.06|ENSG00000176438|chr14:95455714-95455715|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	790.8544799685478	2	790.854872	1579.69519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.459	1	97.743	97.243	98.243	0.28442								0	0	0	0.63775	1	41009	41009		1.3295	0.13619	1				2747	4409	1317	1328	3442	3442					-0.07146887951807912
DEKIRYLSIWD	11	Unmodified	_DEKIRYLSIWD_					0	0	0			REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	719.4873535037041	2	719.372266	1436.72998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.88	1	99.078	98.578	99.578	0.19767								0	0	0	0.63774	1	41631	41631		8.1555	1.9497	1		+		2748	15884	1318	1329	3443	3443					0.029083944521744343
DEKYFNDKKLK	11	Unmodified	_DEKYFNDKKLK_					0	0	0			REV__tr|A0A553SKB4|A0A553SKB4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18305PE=4SV=1	REV__tr|A0A553SKB4|A0A553SKB4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18305PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1988098025322	3	476.589153	1426.74563	-0.19309	-9.2026E-05	-1.2061	-0.00057482	-1.3992	-0.00066685	476.58857357016666	11.549	0.18864	12.219	12.077	12.265	0.66934					7	5	2	0	0	0	0.14606	1	4758	4758		0.45452	0.046251	1	3206500	+		2749	14943	1319	1330	3444	3444					0.04932680969204739
DELEDVFLLPT	11	Unmodified	_DELEDVFLLPT_					0	0	0		SEMA3E|p.Q570Sfs*24|1|0.08|ENSG00000170381|chr7:83387011-83387011|A/-|frameshift_variant;nc|ENSG00000170381|O15041-2|SEMA3E;ENSG00000170381|ENST00000643230|SEMA3E	SEMA3E|p.Q570Sfs*24|1|0.08|ENSG00000170381|chr7:83387011-83387011|A/-|frameshift_variant	SEMA3E|p.Q570Sfs*24|1|0.08|ENSG00000170381|chr7:83387011-83387011|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884460330009	3	430.886976	1289.6391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.57	1	16.397	15.897	16.897	0.82643								0	0	0	0.63775	1	6471	6471		0.40827	0.24894	1				2750	4141	1320	1331	3445	3445					0.005865056840548277
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	474.2318908572197	3	474.229625	1419.66705	2.5158	0.001193	1.7103	0.00081106	4.226	0.0020041	474.2306071114227	46.535	1.2227	46.866	46.562	47.785	0.33034					138	40	5	0	0	0	0.87205	2	19514	19514;19560		6.2344	2.3884	1	22790000	+		2751	15463	1321	1332	3446;3447	3446					-0.02600171335870982
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	474.2318908572197	3	474.229625	1419.66705	2.6757	0.0012689	2.0304	0.00096289	4.7061	0.0022318	474.23064850636183	45.081	0.54539	46.446	46.18	46.725	1.3653					55	16	5	0	0	0	0.87205	1	18872	18872		6.2344	0	1	15026000	+		2752	15463	1321	1332	3448	3448					-0.02600171335870982
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	474.229625	1419.66705	2.5158	0.001193	1.7103	0.00081106	4.226	0.0020041	474.2306071114227	46.535	1.2227	46.866	46.562	47.785	0.33034	-0.14028	-0.00033208	NaN	6.2344	138	40	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22790000	+		2753	15463	1321	1332							-0.02600171335870982
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	474.229625	1419.66705	2.6757	0.0012689	2.0304	0.00096289	4.7061	0.0022318	474.23064850636183	45.081	0.54539	46.446	46.18	46.725	1.3653	0.016153	0.00059753	NaN	6.2344	55	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15026000	+		2754	15463	1321	1332							-0.02600171335870982
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	474.229625	1419.66705	2.3618	0.00112	0.71743	0.00034023	3.0792	0.0014602	474.22929410714397	44.454	0.50864	46.414	46.162	46.671	1.9596	-0.016153	-0.0012705	NaN	6.2344	50	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6358400	+		2755	15463	1321	1332							-0.02600171335870982
DELSFNYNKKY	11	Unmodified	_DELSFNYNKKY_					0	0	0			REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	REV__tr|A0A7D6VSW8|A0A7D6VSW8_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10855PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	474.229625	1419.66705	1.971	0.00093472	2.6979	0.0012794	4.6689	0.0022141	474.2300223721815	45.156	0.56546	47.115	46.799	47.364	1.9596	0.10922	0.001073	NaN	6.2344	21	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410870	+		2756	15463	1321	1332							-0.02600171335870982
DELWKFFKCRD	11	Unmodified	_DELWKFFKCRD_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	495.9091674685478	3	496.2431	1485.70747	0.12632	6.2687E-05	-0.51047	-0.00025332	-0.38415	-0.00019063	496.242697217881	14.953	0.12729	15.722	15.611	15.738	0.76937					5	3	2	0	0	0	0.14606	1	6209	6209		2.6312	1.3016	1	893680	+		2757	10072	1322	1333	3449	3449					-0.01595528217080755
DENLHCVPV	9	Unmodified	_DENLHCVPV_					0	0	0		ENST00000555234.1_1_14:75415208-75421922:-|nuORF;ENST00000556939.5_1_14:75415208-75421945:-|nuORF;nc|ENSG00000119630|P49763-2|PGF;ENSG00000119630|ENST00000555567|PGF;nc|ENSG00000119630|P49763|PGF;nc|ENSG00000119630|P49763-4|PGF	ENST00000555234.1_1_14:75415208-75421922:-|nuORF	ENST00000555234.1_1_14:75415208-75421922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2413818240166	2	513.239667	1024.46478	3.7094	0.0019038	-0.93972	-0.0004823	2.7697	0.0014215	513.2392351935993	91.314	0.71953	92.68	92.374	93.093	1.366					112	22	7	0	0	0	0.39927	1	38478	38478		20.454	2.3186	1	26010000			2758	2077	1323	1334	3450	3450					-0.04647353222264883
DENTYAPTMPF	11	Unmodified	_DENTYAPTMPF_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.2755615115166	2	643.273903	1284.53325	1.3156	0.00084626	0.71917	0.00046263	2.0347	0.0013089	643.2743943621981	54.392	0.60524	55.797	55.485	56.09	1.4048					46	18	3	0	0	0	0.58697	2	22703	22703;22834		21.537	5.3879	1	3119600			2759	4518	1324	1335	3451;3452	3451					-0.09763153433095795
DENTYAPTMPF	11	Unmodified	_DENTYAPTMPF_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.2751953005791	2	643.273903	1284.53325	1.2664	0.00081463	0.308	0.00019813	1.5744	0.0010128	643.2742701655037	53.889	0.59713	55.859	55.627	56.224	1.9697					47	18	3	0	0	0	0.87205	1	22533	22533		11.495	0	1	2607300			2760	4518	1324	1335	3453	3453					-0.09763153433095795
DEPPTEWQ	8	Unmodified	_DEPPTEWQ_					0	0	0			REV__ENSG00000173275|ENST00000339249|ZNF449	REV__ENSG00000173275|ENST00000339249|ZNF449	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.5524474978447	3	334.47854	1000.41379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.265	1	59.59	59.09	60.09	0.32553								0	0	0	1.0178	1	24836	24836		0.45834	0	1		+		2761	11092	1325	1336	3454	3454					-0.08639978995472575
DEPSSHVSDQS	11	Unmodified	_DEPSSHVSDQS_					0	0	0			REV__ENST00000459998.1_1_7:30325231-30328375:+|nuORF	REV__ENST00000459998.1_1_7:30325231-30328375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.8327209353447	3	396.498551	1186.47382	-1.194	-0.00047341	0.72418	0.00028714	-0.46981	-0.00018628	396.4996278581576	10.473	1.483	10.473	9.9062	11.389	0					63	47	2	0	0	0	0.91757	1	4357	4357		8.7518	2.9684	1	952150	+		2762	11291	1326	1337	3455	3455					-0.11195333122896045
DEQSVFSTEID	11	Unmodified	_DEQSVFSTEID_					0	0	0			REV__tr|A0A553SKC9|A0A553SKC9_NIACIAspartate--tRNA(Asp/Asn)ligaseOS=NialliacirculansOX=1397GN=aspSPE=3SV=1	REV__tr|A0A553SKC9|A0A553SKC9_NIACIAspartate--tRNA(Asp/Asn)ligaseOS=NialliacirculansOX=1397GN=aspSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	635.2773315310478	2	635.277697	1268.54084	1.4448	0.00091782	-2.3724	-0.0015071	-0.92761	-0.00058929	635.2762841951045	64.734	0.5042	66.662	66.422	66.926	1.928					52	15	5	0	0	0	0.66268	1	27109	27109		19.362	7.1213	1	16599000	+		2763	14948	1327	1338	3456	3456					-0.08268722631805758
DERAAYFRCY	10	Unmodified	_DERAAYFRCY_					0	0	0		ENST00000484860.1_1_20:53171528-53171867:+|nuORF;ENSG00000101134|ENST00000262593|DOK5	ENST00000484860.1_1_20:53171528-53171867:+|nuORF	ENST00000484860.1_1_20:53171528-53171867:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	431.8626281619072	3	431.860878	1292.56081	2.6007	0.0011232	0.92504	0.00039949	3.5258	0.0015226	431.86185969664865	60.017	0.36038	61.437	61.236	61.597	1.4196					35	11	4	0	0	0	0.88022	1	25152	25152		1.7423	0.52744	1	4433700			2764	1322	1328	1339	3457	3457					-0.07377205382158536
DERAAYFRCY	10	Unmodified	_DERAAYFRCY_					0	0	0		ENST00000484860.1_1_20:53171528-53171867:+|nuORF;ENSG00000101134|ENST00000262593|DOK5	ENST00000484860.1_1_20:53171528-53171867:+|nuORF	ENST00000484860.1_1_20:53171528-53171867:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	431.860878	1292.56081	2.8353	0.0012244	1.071	0.00046253	3.9063	0.001687	432.1952522498128	59.517	0.32517	61.486	61.315	61.64	1.969	0.024647	0.00010225	NaN	1.7423	27	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3401000			2765	1322	1328	1339							-0.07377205382158536
DESDILTV	8	Unmodified	_DESDILTV_					0	0	0			REV__tr|A0A553SHX6|A0A553SHX6_NIACINADHoxidaseOS=NialliacirculansOX=1397GN=CEQ21_13800PE=3SV=1	REV__tr|A0A553SHX6|A0A553SHX6_NIACINADHoxidaseOS=NialliacirculansOX=1397GN=CEQ21_13800PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	446.2179138064384	2	446.218923	890.423293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.11	1	105.17	104.67	105.67	0.056801								0	0	0	1.0178	1	44494	44494		2.3027	0	1		+		2766	14825	1329	1340	3458	3458					-0.02630210709946823
DESKMFLLL	9	Unmodified	_DESKMFLLL_					0	0	0			REV__nc|ENSG00000085276|Q03112-8|MECOM	REV__nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.2929565310478	2	548.291368	1094.56818	2.4507	0.0013437	-0.36391	-0.00019953	2.0868	0.0011442	548.2917058027004	60.214	0.57495	61.634	61.358	61.933	1.4196					75	18	5	0	0	0	0.057024	1	25249	25249		65.235	2.6623	1	19825000	+		2767	8848	1330	1341	3459	3459					0.02468134165542324
DESKMFLLL	9	Unmodified	_DESKMFLLL_					0	0	0			REV__nc|ENSG00000085276|Q03112-8|MECOM	REV__nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	548.291368	1094.56818	1.8743	0.0010276	0.72895	0.00039968	2.6032	0.0014273	548.291872542644	62.009	0.43841	62.009	61.804	62.242	0	0.26673	0.00077547	NaN	65.235	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2475600	+		2768	8848	1330	1341							0.02468134165542324
DESKMFLLL	9	Unmodified	_DESKMFLLL_					0	0	0			REV__nc|ENSG00000085276|Q03112-8|MECOM	REV__nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	548.291368	1094.56818	2.0295	0.0011128	0.60917	0.000334	2.6387	0.0014468	548.2919356019457	61.369	0.40203	61.699	61.516	61.918	0.32974	-0.042859	0.00064413	NaN	65.235	35	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3537000	+		2769	8848	1330	1341							0.02468134165542324
DESYFIVIQ	9	Unmodified	_DESYFIVIQ_					0	0	0			REV__SLC36A3|p.E415Q|1|0.55|ENSG00000186334|chr5:151277563-151277563|C/G|missense_variant	REV__SLC36A3|p.E415Q|1|0.55|ENSG00000186334|chr5:151277563-151277563|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.2792236208916	2	557.276772	1112.53899	1.5454	0.00086121	2.8911	0.0016112	4.4365	0.0024724	557.2782212167565	63.11	0.31432	63.11	62.957	63.272	0					21	9	3	0	0	0	0.27148	1	26318	26318		26.884	2.2098	1	960990	+		2770	14625	1331	1342	3460	3460					-0.012776868590890444
DETIAIVAVA	10	Unmodified	_DETIAIVAVA_					0	0	0			REV__tr|A0A7D6ZEN9|A0A7D6ZEN9_9CLOTNUDIXhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14415PE=4SV=1	REV__tr|A0A7D6ZEN9|A0A7D6ZEN9_9CLOTNUDIXhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14415PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1001.553027331829	1	1001.55135	1000.54408	2.1091	0.0021124	0.43189	0.00043256	2.541	0.0025449	1001.5522937361726	62.68	0.28002	63.01	62.85	63.13	0.32974					15	8	2	0	0	0	0.22411	2	26303	26234;26303		46.021	17.534	1	698480	+		2771	14974	1332	1343	3461;3462	3462					0.04382617003534506
DEVANGNL	8	Unmodified	_DEVANGNL_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;NR1H2-MYH14|1|fusion;NR1H2-MYH14|2|fusion	nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	416.1951782107353	2	416.195782	830.377011	-0.63343	-0.00026363	1.4642	0.00060939	0.83076	0.00034576	416.1962225218199	10.606	1.4535	10.606	10.059	11.513	0					69	46	2	0	0	0	0.82039	3	4351	4351;4407;4458		19.439	2.4967	1	695110			2772	1511	1333	1344	3463;3464;3465	3463					-0.04496230821382596
DEVANGNL	8	Unmodified	_DEVANGNL_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;NR1H2-MYH14|1|fusion;NR1H2-MYH14|2|fusion	nc|ENSG00000105357|Q7Z406-4|MYH14	nc|ENSG00000105357|Q7Z406-4|MYH14	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.1962158083916	2	416.195782	830.377011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.177	1	11.259	10.759	11.759	0.082325								0	0	0	1.0178	1	4637	4637		8.5933	1.304	1				2773	1511	1333	1344	3466	3466					-0.04496230821382596
DEVEDDNDDK	10	Unmodified	_DEVEDDNDDK_					0	0	0			REV__ENST00000565598.2_1_16:53404185-53404910:-|nuORF	REV__ENST00000565598.2_1_16:53404185-53404910:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.2247802615166	2	597.225662	1192.43677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.879	1	15.879	15.379	16.379	0								0	0	0	0.66052	1	6593	6593		3.5965	0.8613	1		+		2774	13937	1334	1345	3467	3467					-0.151750494593216
DEYCNYCR	8	Unmodified	_DEYCNYCR_					0	0	0		nc|ENSG00000196460|Q6ZV50-2|RFX8;ENSG00000196460|ENST00000428343|RFX8;nc|ENSG00000196460|Q6ZV50|RFX8	nc|ENSG00000196460|Q6ZV50-2|RFX8	nc|ENSG00000196460|Q6ZV50-2|RFX8	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1918823122978	2	533.191859	1064.36917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.689	1	40.526	40.026	41.026	1.8366								0	0	0	1.0178	1	16226	16226		0.69038	0.088878	1				2775	4940	1335	1346	3468	3468					-0.1604444940483063
DEYVKTRT	8	Unmodified	_DEYVKTRT_					0	0	0		nc|ENSG00000175727|Q9HAP2-2|MLXIP;ENSG00000175727|ENST00000319080|MLXIP;IFT57-MLXIP|1|fusion	nc|ENSG00000175727|Q9HAP2-2|MLXIP	nc|ENSG00000175727|Q9HAP2-2|MLXIP	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2555419802666	2	506.258914	1010.50327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.36	1	100.36	99.861	100.86	0								0	0	0	1.0178	1	42011	42011		8.5933	1.8701	1				2776	4382	1336	1347	3469	3469					-0.0015572431608461557
DEYYYDYEILQ	11	Unmodified	_DEYYYDYEILQ_					0	0	0		tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2193176150322	3	505.217162	1512.62966	0.75616	0.00038202	2.4959	0.001261	3.2521	0.001643	505.218531365032	15.656	0.84058	15.656	15.405	16.245	0					67	26	5	0	0	0	1.0191	2	6486	6486;6539		2.6312	1.3016	1	3518000			2777	17006	1337	1348	3470;3471	3470					-0.10615307392140494
DEYYYDYEILQ	11	Unmodified	_DEYYYDYEILQ_					0	0	0		tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.5528442263603	3	505.217162	1512.62966	0.71929	0.0003634	2.1006	0.0010612	2.8199	0.0014246	505.2184485796439	15.462	0.65604	15.592	15.399	16.055	0.13022					56	20	5	0	0	0	1.0191	1	6427	6427		2.6312	0.54727	1	2573300			2778	17006	1337	1348	3472	3472					-0.10615307392140494
DEYYYDYEILQ	11	Unmodified	_DEYYYDYEILQ_					0	0	0		tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2184936404228	3	505.217162	1512.62966	0.37499	0.00018945	2.244	0.0011337	2.619	0.0013231	505.21831415174023	14.926	0.40571	15.695	15.519	15.924	0.76937					39	12	4	0	0	0	1.0362	1	6220	6220		1.3296	0.11481	1	1846300			2779	17006	1337	1348	3473	3473					-0.10615307392140494
DFDSEYQELWD	11	Unmodified	_DFDSEYQELWD_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant;ENST00000555950.5_1_14:33086197-33201884:+|nuORF;nc|ENSG00000151320|Q13023-2|AKAP6	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	482.8614074587822	3	482.861378	1445.56231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.22	1	106.28	105.78	106.78	0.05455								0	0	0	0.63775	1	45213	45213		0.45452	0.29519	1				2780	33	1338	1349	3474	3474					-0.1426533760309212
DFDSEYQELWD	11	Unmodified	_DFDSEYQELWD_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant;ENST00000555950.5_1_14:33086197-33201884:+|nuORF;nc|ENSG00000151320|Q13023-2|AKAP6	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	482.8624755740166	3	482.861378	1445.56231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.33	1	106.39	105.89	106.89	0.05455								0	0	0	0.63775	1	45286	45286		0.45452	0.29519	1				2781	33	1338	1349	3475	3475					-0.1426533760309212
DFDSEYQELWD	11	Unmodified	_DFDSEYQELWD_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant;ENST00000555950.5_1_14:33086197-33201884:+|nuORF;nc|ENSG00000151320|Q13023-2|AKAP6	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	482.8620483279228	3	482.861378	1445.56231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.44	1	106.5	106	107	0.05455								0	0	0	0.63775	1	45353	45353		0.45452	0.29519	1				2782	33	1338	1349	3476	3476					-0.1426533760309212
DFDSEYQELWD	11	Unmodified	_DFDSEYQELWD_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant;ENST00000555950.5_1_14:33086197-33201884:+|nuORF;nc|ENSG00000151320|Q13023-2|AKAP6	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	482.8618041872978	3	482.861378	1445.56231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.56	1	106.61	106.11	107.11	0.05455								0	0	0	0.63775	1	45421	45421		0.45452	0.29519	1				2783	33	1338	1349	3477	3477					-0.1426533760309212
DFEDNTCEMKP	11	Unmodified	_DFEDNTCEMKP_					0	0	0		ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	ENSG00000101126|ENST00000621696|ADNP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	332.2433349490166	4	332.88379	1327.50605	1.7354	0.0005777	-0.34905	-0.00011619	1.3864	0.0004615	333.1346454243993	48.104	0.18521	50.081	49.929	50.114	1.9772					8	5	2	0	0	0	0.14606	1	20149	20149		0.45452	0	1	558890			2784	1320	1339	1350	3478	3478					-0.14460005035789436
DFLGREQII	9	Unmodified	_DFLGREQII_					0	0	0		tr|A0A553SLR9|A0A553SLR9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_21145PE=4SV=1	tr|A0A553SLR9|A0A553SLR9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_21145PE=4SV=1	tr|A0A553SLR9|A0A553SLR9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_21145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3019897341728	2	545.798206	1089.58186	1.9195	0.0010477	-1.0795	-0.00058919	0.83999	0.00045846	546.3011508104523	77.694	0.25006	78.011	77.888	78.138	0.31653					10	7	2	0	0	0	0.68551	1	32482	32482		7.9102	0	1	370180			2785	16351	1340	1351	3479	3479					0.04065127988997119
DFLLPPDHHTV	11	Unmodified	_DFLLPPDHHTV_					0	0	0			REV__nc|ENSG00000101846|P08842|STS	REV__nc|ENSG00000101846|P08842|STS	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880493044853	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.787	1	19.235	18.735	19.735	1.448								0	0	0	0.63775	1	7389	7389		0.45452	0	1		+		2786	14405	1341	1352	3480	3480					0.007201845634426718
DFNHFYGMQK	10	Unmodified	_DFNHFYGMQK_					0	0	0		ENSG00000182836|ENST00000377801|PLCXD3	ENSG00000182836|ENST00000377801|PLCXD3	ENSG00000182836|ENST00000377801|PLCXD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	322.3958618044853	4	322.396025	1285.55499	-3.4295	-0.0011057	2.1309	0.000687	-1.2986	-0.00041865	322.39688545827676	11.715	1.1429	11.715	11.14	12.283	0					92	36	4	0	0	0	0.85995	2	4861	4861;4917		5.7834	2.4638	1	2286700			2787	4629	1342	1353	3481;3482	3481					-0.07636303893855256
DFPALADRN	9	Unmodified	_DFPALADRN_					0	0	0		ENST00000549947.1_1_12:70729240-70731562:+|nuORF;ENST00000548021.5_1_12:70671967-70729348:+|nuORF;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-4|CNOT2;ENSG00000111596|ENST00000229195|CNOT2;CNOT2-C3orf19|1|fusion	ENST00000549947.1_1_12:70729240-70731562:+|nuORF	ENST00000549947.1_1_12:70729240-70731562:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7507202029228	2	509.751256	1017.48796	1.3676	0.00069714	-0.26515	-0.00013516	1.1025	0.00056198	509.751175817269	26.907	0.33025	26.907	26.745	27.075	0					25	10	3	0	0	0	0.44512	1	11221	11221		18.146	2.2992	1	2309000			2788	318	1343	1354	3483	3483					-0.02008591113303737
DFPALADRN	9	Unmodified	_DFPALADRN_					0	0	0		ENST00000549947.1_1_12:70729240-70731562:+|nuORF;ENST00000548021.5_1_12:70671967-70729348:+|nuORF;nc|ENSG00000111596|Q9NZN8-2|CNOT2;nc|ENSG00000111596|Q9NZN8-4|CNOT2;ENSG00000111596|ENST00000229195|CNOT2;CNOT2-C3orf19|1|fusion	ENST00000549947.1_1_12:70729240-70731562:+|nuORF	ENST00000549947.1_1_12:70729240-70731562:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.7517883181572	2	509.751256	1017.48796	1.118	0.00056991	-0.46849	-0.00023881	0.64953	0.0003311	509.75090403163927	26.498	0.33313	26.76	26.563	26.896	0.26173					16	10	2	0	0	0	0.66458	1	11099	11099		8.7454	0	1	663010			2789	318	1343	1354	3484	3484					-0.02008591113303737
DFPFFTDL	8	Unmodified	_DFPFFTDL_					0	0	0			REV__nc|ENSG00000085721|Q9NYV6-4|RRN3	REV__nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2394592165947	2	501.234376	1000.4542	0.87774	0.00043995	4.1711	0.0020907	5.0489	0.0025307	501.2386317911461	30.342	0.30889	31.625	31.441	31.75	1.2825					18	9	3	0	0	0	0.87276	1	12709	12709		13.508	4.1248	1	832800	+		2790	8854	1344	1355	3485	3485					-0.04601012605053256
DFPGHNTLT	9	Unmodified	_DFPGHNTLT_					0	0	0			REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2404662966728	2	501.237981	1000.46141	0.551	0.00027618	-2.1286	-0.0010669	-1.5776	-0.00079074	501.2388288055606	29.921	0.21522	31.736	31.584	31.8	1.8151					14	6	3	0	0	0	0.6486	1	12547	12547		9.3831	0.035688	1	974570	+		2791	15343	1345	1356	3486	3486					-0.03880280004625547
DFPGHNTLT	9	Unmodified	_DFPGHNTLT_					0	0	0			REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	501.237981	1000.46141	1.2854	0.00064431	0.68233	0.00034201	1.9678	0.00098632	501.2382731934013	31.801	0.38345	31.801	31.565	31.949	0	0.068512	0.00013653	NaN	9.3831	33	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4146600	+		2792	15343	1345	1356							-0.03880280004625547
DFPGHNTLT	9	Unmodified	_DFPGHNTLT_					0	0	0			REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	501.237981	1000.46141	1.7591	0.00088175	0.88258	0.00044238	2.6417	0.0013241	501.2384375735469	31.478	0.30898	31.769	31.569	31.878	0.29086	0.035965	0.00033727	NaN	9.3831	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1765700	+		2793	15343	1345	1356							-0.03880280004625547
DFPGHNTLT	9	Unmodified	_DFPGHNTLT_					0	0	0			REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	501.237981	1000.46141	0.87773	0.00043995	-3.0217	-0.0015146	-2.144	-0.0010746	501.2386317911461	30.342	0.30889	31.625	31.441	31.75	1.2825	-0.10793	-0.0035767	NaN	9.3831	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	832800	+		2794	15343	1345	1356							-0.03880280004625547
DFPGHNTLT	9	Unmodified	_DFPGHNTLT_					0	0	0			REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	REV__tr|A0A7D6VNW0|A0A7D6VNW0_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19795PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	501.237981	1000.46141	0.551	0.00027618	-2.1286	-0.0010669	-1.5776	-0.00079074	501.2388288055606	29.921	0.21522	31.736	31.584	31.8	1.8151	0.0034508	-0.0026813	NaN	9.3831	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	974570	+		2795	15343	1345	1356							-0.03880280004625547
DFPIGAERN	9	Unmodified	_DFPIGAERN_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7519409060478	2	509.751256	1017.48796	1.3676	0.00069714	-0.26515	-0.00013516	1.1025	0.00056198	509.751175817269	26.907	0.33025	26.907	26.745	27.075	0					25	10	3	0	0	0	0.35391	1	11266	11266		22.736	4.5899	1	2309000	+		2796	8890	1346	1357	3487	3487					-0.020085911132923684
DFPIGAERN	9	Unmodified	_DFPIGAERN_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.751256	1017.48796	1.118	0.00056991	-0.46849	-0.00023881	0.64953	0.0003311	509.75090403163927	26.498	0.33313	26.76	26.563	26.896	0.26173	-0.084705	4.617E-05	NaN	22.736	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663010	+		2797	8890	1346	1357							-0.020085911132923684
DFPIGAERN	9	Unmodified	_DFPIGAERN_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	509.751256	1017.48796	1.6469	0.00083949	-1.2017	-0.00061258	0.44514	0.00022691	510.25221074494715	25.531	0.27743	26.79	26.617	26.895	1.2594	-0.054232	-0.00070137	NaN	22.736	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	416760	+		2798	8890	1346	1357							-0.020085911132923684
DFPIGAERN	9	Unmodified	_DFPIGAERN_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	509.751256	1017.48796	0.86889	0.00044292	-0.69506	-0.00035431	0.17383	8.8612E-05	509.7514232991453	25.205	0.20813	26.921	26.789	26.997	1.7167	0.076857	-0.00018481	NaN	22.736	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	262490	+		2799	8890	1346	1357							-0.020085911132923684
DFQLSQLHT	9	Unmodified	_DFQLSQLHT_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2679321169853	2	544.772188	1087.52982	2.876	0.0015668	-2.1572	-0.0011752	0.71887	0.00039162	544.7743842871917	74.926	0.85915	76.232	75.756	76.615	1.3063					78	27	5	0	0	0	0.39927	1	31399	31399		20.454	2.3073	1	11432000	+		2800	8893	1347	1358	3488	3488					-0.0104403542475211
DFQPAHDNV	9	Unmodified	_DFQPAHDNV_					0	0	0			REV__PCDHGB6|p.R314Nfs*30|1|0.19|ENSG00000253305|chr5:141409142-141409143|-/ACTCCCTACTGTTGTATAAGTTTGAAATT|frameshift_variant	REV__PCDHGB6|p.R314Nfs*30|1|0.19|ENSG00000253305|chr5:141409142-141409143|-/ACTCCCTACTGTTGTATAAGTTTGAAATT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.2858764529228	2	521.733063	1041.45157	2.064	0.0010769	-3.8801	-0.0020244	-1.8161	-0.00094754	521.7302798940098	71.643	0.2519	73.467	73.349	73.601	1.824					12	7	2	0	0	0	0.076673	1	30098	30098		22.736	0	1	463760	+		2801	11955	1348	1359	3489	3489					-0.06749468010025339
DFSHSKEWF	9	Unmodified	_DFSHSKEWF_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1;nc|ENSG00000157613|Q96BA8-2|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.7677490115166	2	591.764363	1181.51417	2.3582	0.0013955	2.7272	0.0016138	5.0854	0.0030094	591.7659005962009	39.228	0.38209	40.524	40.382	40.764	1.2961					22	11	3	0	0	0	0.59203	1	16502	16502		11.64	0.81637	1	2053700			2802	3477	1349	1360	3490	3490					-0.06932321941826558
DFVDVLHTF	9	Unmodified	_DFVDVLHTF_					0	0	0		ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	ENSG00000175445|ENST00000650287|LPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7730590701103	2	546.771657	1091.52876	2.1228	0.0011607	0.05085	2.7803E-05	2.1737	0.0011885	546.7716338399553	78.828	0.40182	80.563	80.382	80.784	1.735					40	12	4	0	0	0	0.66839	1	33039	33039		8.5933	0.68312	1	7643300			2803	4374	1350	1361	3491	3491					-0.013342497936719155
DFYFETVFH	9	Unmodified	_DFYFETVFH_					0	0	0		ENST00000308488.10_1_11:77375811-77375982:-|nuORF	ENST00000308488.10_1_11:77375811-77375982:-|nuORF	ENST00000308488.10_1_11:77375811-77375982:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1827575564384	3	402.181835	1203.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.21	1	95.613	95.113	96.113	0.40208								0	0	0	0.42693	1	40058	40058		0.26902	0.033176	1				2804	5786	1351	1362	3492	3492					-0.06994553656272728
DGCDNDNDC	9	Unmodified	_DGCDNDNDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2;REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	324.9266540408134	3	324.088618	969.244024	0.64208	0.00020809	-3.5018	-0.0011349	-2.8597	-0.00092679	324.0877112828934	42.102	1.0925	43.441	43.141	44.233	1.3399					45	34	2	0	0	0	0.11957	1	17550	17550		0	0	1	2948200	+		2805	8818;9621	1352	1363	3493	3493					-0.24182786331857642
DGCDNDNDC	9	Unmodified	_DGCDNDNDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2;REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	324.088618	969.244024	1.1304	0.00036635	-3.8541	-0.0012491	-2.7237	-0.00088272	324.0875906439519	43.134	0.92181	43.458	43.229	44.151	0.32388	0.050713	0.00010514	NaN	0	41	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2573900	+		2806	8818;9621	1352	1363							-0.24182786331857642
DGCDNDNDC	9	Unmodified	_DGCDNDNDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2;REV__ENSG00000123384|ENST00000243077|LRP1	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	324.088618	969.244024	1.207	0.00039117	-4.5036	-0.0014596	-3.2966	-0.0010684	324.0874101110635	41.429	1.022	43.322	42.991	44.013	1.8927	-0.085125	-0.00052636	NaN	0	54	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3459400	+		2807	8818;9621	1352	1363							-0.24182786331857642
DGCSCCCFPC	10	Unmodified	_DGCSCCCFPC_					0	0	0			REV__ENSG00000176723|ENST00000315678|ZNF843	REV__ENSG00000176723|ENST00000315678|ZNF843	MSMS	GG20161007_CRH_Patient100_W632_02	4	519.1401244997978	2	519.136326	1036.2581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.737	1	82.433	81.933	82.933	1.6959								0	0	0	0.66237	1	33872	33872		0.45834	0.45834	1		+		2808	11191	1353	1364	3494	3494					-0.258578717004184
DGDGDDGG	8	Unmodified	_DGDGDDGG_					0	0	0			REV__CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant;REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.2118408083916	1	707.211468	706.204192	0.8475	0.00059936	2.5007	0.0017685	3.3482	0.0023679	707.2140827383802	15.94	2.3468	15.94	15.124	17.471	0					142	74	2	0	0	0	0.89176	1	6876	6876		0.79363	0.79363	1	1206700	+		2809	8200;8199	1354	1365	3495	3495					-0.16066221948597104
DGEADEDDFSN	11	Unmodified	_DGEADEDDFSN_					0	0	0			REV__nc|ENSG00000101098|Q9H426-2|RIMS4	REV__nc|ENSG00000101098|Q9H426-2|RIMS4	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2152587771416	2	607.210012	1212.40547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.332	1	99.332	98.832	99.832	0								0	0	0	0.63775	1	41572	41572		1.1933	0.59184	1		+		2810	14403	1355	1366	3496	3496					-0.19223622493404946
DGFDMDDDHF	10	Unmodified	_DGFDMDDDHF_					0	0	0			REV__TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	REV__TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2095214724541	2	607.20876	1212.40297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.421	1	56.389	55.889	56.889	1.9684								0	0	0	0.66155	1	22797	22797		1.8442	0.19162	1		+		2811	9007	1356	1367	3497	3497					-0.19473749432086152
DGGIDPLVR	9	Unmodified	_DGGIDPLVR_					0	0	0		LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant;nc|ENSG00000167419|P22079-2|LPO;ENSG00000167419|ENST00000262290|LPO	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2571899294853	2	471.256174	940.497795	1.9105	0.00090035	0.29664	0.0001398	2.2072	0.0010401	471.256391116331	33.436	0.43486	33.436	33.233	33.668	0					34	13	4	0	0	0	0.010585	2	14015	13967;14015		106.94	35.807	1	7173400			2812	3967	1357	1368	3498;3499	3499					0.025165968920987325
DGGIDPLVR	9	Unmodified	_DGGIDPLVR_					0	0	0		LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant;nc|ENSG00000167419|P22079-2|LPO;ENSG00000167419|ENST00000262290|LPO	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2570678591728	2	471.256174	940.497795	2.0207	0.00095228	1.0807	0.00050929	3.1014	0.0014616	471.2571879492118	33.03	0.32246	33.325	33.167	33.489	0.29431					23	11	3	0	0	0	0.053939	2	13882	13840;13882		66.457	28.483	1	1489000			2813	3967	1357	1368	3500;3501	3501					0.025165968920987325
DGGIDPLVR	9	Unmodified	_DGGIDPLVR_					0	0	0		LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant;nc|ENSG00000167419|P22079-2|LPO;ENSG00000167419|ENST00000262290|LPO	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2555419802666	2	471.256174	940.497795	0.80071	0.00037734	1.8716	0.00088202	2.6723	0.0012594	471.25718324677774	31.974	0.24978	33.256	33.11	33.36	1.2813					11	8	2	0	0	0	0.21592	1	13401	13401		31.268	15.119	1	888620			2814	3967	1357	1368	3502	3502					0.025165968920987325
DGGIDPLVR	9	Unmodified	_DGGIDPLVR_					0	0	0		LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant;nc|ENSG00000167419|P22079-2|LPO;ENSG00000167419|ENST00000262290|LPO	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2567626833916	2	471.256174	940.497795	1.2128	0.00057152	0.72212	0.0003403	1.9349	0.00091183	471.2563200908761	31.493	0.28697	33.318	33.103	33.39	1.8246					14	9	2	0	0	0	0.21592	1	13209	13209		31.268	15.119	1	677020			2815	3967	1357	1368	3503	3503					0.025165968920987325
DGLIFTNLVDF	11	Unmodified	_DGLIFTNLVDF_					0	0	0		tr|A0A7D6ZPT5|A0A7D6ZPT5_9CLOTPhosphopentomutaseOS=ClostridiumintestinaleOX=36845GN=deoBPE=3SV=1	tr|A0A7D6ZPT5|A0A7D6ZPT5_9CLOTPhosphopentomutaseOS=ClostridiumintestinaleOX=36845GN=deoBPE=3SV=1	tr|A0A7D6ZPT5|A0A7D6ZPT5_9CLOTPhosphopentomutaseOS=ClostridiumintestinaleOX=36845GN=deoBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.3268920779228	2	627.324254	1252.63395	2.74	0.0017189	0.76649	0.00048084	3.5065	0.0021997	627.3248560599344	92.492	0.42229	93.819	93.601	94.024	1.3269					34	12	4	0	0	0	0.46674	1	38968	38968		24.991	3.454	1	5237100			2816	17121	1358	1369	3504	3504					0.017742466120807876
DGNDIAPMVSW	11	Unmodified	_DGNDIAPMVSW_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1802245974541	3	402.181618	1203.52302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.059	1	30.059	29.559	30.559	0								0	0	0	0.63775	1	12586	12586		0.50596	0.23694	1				2817	16271	1359	1370	3505	3505					-0.07059716367666624
DGNDIAPMVSW	11	Unmodified	_DGNDIAPMVSW_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1808044314384	3	402.181618	1203.52302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.854	1	30.854	30.354	31.354	0								0	0	0	0.63775	1	12924	12924		0.50596	0.23694	1				2818	16271	1359	1370	3506	3506					-0.07059716367666624
DGNNEAAL	8	Unmodified	_DGNNEAAL_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1800414919853	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.029	1	81.745	81.245	82.245	1.7167								0	0	0	1.0178	1	33564	33564		2.5775	0	1				2819	2092	1360	1371	3507	3507					-0.06336803855481321
DGPVVLGT	8	Unmodified	_DGPVVLGT_					0	0	0		nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F;ENSG00000049769|ENST00000055335|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.2092162966728	2	379.208161	756.401769	-0.32679	-0.00012392	2.6865	0.0010187	2.3597	0.00089481	379.20904457142314	33.549	0.20961	34.824	34.714	34.923	1.2746					35	19	2	0	0	0	0.89008	1	14047	14047		2.5775	0	1	23017000			2820	695	1361	1372	3508	3508					0.013824490520164545
DGPVVLGT	8	Unmodified	_DGPVVLGT_					0	0	0		nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F;ENSG00000049769|ENST00000055335|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2093688845634	2	379.208161	756.401769	0.55939	0.00021212	1.7828	0.00067606	2.3422	0.00088819	379.20879866385167	33.059	0.24591	34.884	34.738	34.984	1.8246					28	21	2	0	0	0	0.89008	1	13873	13873		2.5775	0	1	16539000			2821	695	1361	1372	3509	3509					0.013824490520164545
DGPVVLGT	8	Unmodified	_DGPVVLGT_					0	0	0		nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F;ENSG00000049769|ENST00000055335|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	379.208161	756.401769	-0.63825	-0.00024203	3.1637	0.0011997	2.5254	0.00095766	379.2092278761483	35.275	0.28212	35.275	35.089	35.371	0	0.25799	0.00093112	NaN	2.5775	45	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19922000			2822	695	1361	1372							0.013824490520164545
DGSFSAFGN	9	Unmodified	_DGSFSAFGN_					0	0	0		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109;ENST00000474094.1_1_6:74502386-74513776:+|nuORF	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1277953982353	3	301.12773	900.361361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.519	1	34.794	34.294	35.294	1.2746								0	0	0	0.42693	1	14061	14061		0.26902	0	1				2823	3452	1362	1373	3510	3510					-0.09280517338413574
DGSLDDTRD	9	Unmodified	_DGSLDDTRD_					0	0	0			REV__ENST00000375300.5_1_11:116824776-116827694:-|nuORF	REV__ENST00000375300.5_1_11:116824776-116827694:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2104675173759	2	497.209618	992.404682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6438	1	7.6438	7.1438	8.1438	0								0	0	0	0.42693	1	3142	3142		1.8442	0	1		+		2824	12713	1363	1374	3511	3511					-0.0918237235180186
DHDCADGSDEK	11	Unmodified	_DHDCADGSDEK_					0	0	0		ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.2156249880791	2	596.214574	1190.4146	1.0616	0.00063294	3.7135	0.002214	4.7751	0.002847	596.2172613284878	17.995	0.77218	17.995	17.347	18.119	0					46	24	3	0	0	0	0.87205	2	7476	7426;7476		11.495	4.7715	1	631810			2825	2188	1364	1375	3512;3513	3513					-0.17299552408735508
DHEDGGGGSC	10	Unmodified	_DHEDGGGGSC_					0	0	0		ENST00000607988.5_2_1:44501822-44505632:+|nuORF	ENST00000607988.5_2_1:44501822-44505632:+|nuORF	ENST00000607988.5_2_1:44501822-44505632:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1348144412041	3	311.771618	932.293023	-1.8854	-0.0005878	0.011727	3.6561E-06	-1.8736	-0.00058414	311.7720068842615	60.643	0.096294	60.643	60.573	60.669	0					4	2	2	0	0	0	0.12561	1	25270	25270		0	0	1	122080			2826	7568	1365	1376	3514	3514					-0.17583129980562262
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5115539431572	3	381.512355	1141.51524	-0.75121	-0.0002866	0.49376	0.00018837	-0.25745	-9.8222E-05	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.45911	1	12693	12693		17.443	3.8278	1	2428000			2827	7495	1366	1377	3515	3515					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5104247927666	3	381.512355	1141.51524	0.096957	3.699E-05	-3.6288	-0.0013844	-3.5318	-0.0013474	381.51123605439795	20.176	1.4503	21.301	20.796	22.247	1.1254					89	47	2	0	0	0	0.54255	1	8635	8635		13.615	0	1	1360700			2828	7495	1366	1377	3516	3516					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5096923708916	3	381.512355	1141.51524	0.53595	0.00020447	-3.1733	-0.0012106	-2.6373	-0.0010062	381.51140201789013	25.284	2.6906	26.543	25.442	28.133	1.2594					113	87	2	0	0	0	0.57699	1	10852	10852		12.241	0	1	1140900			2829	7495	1366	1377	3517	3517					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5118286013603	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5567	1	5.178	4.678	5.678	0.62127								0	0	0	0.3648	1	1881	1881		12.241	0	1				2830	7495	1366	1377	3518	3518					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5087768435478	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7005	1	5.3217	4.8217	5.8217	0.62127								0	0	0	0.33422	1	1939	1939		15.248	0	1				2831	7495	1366	1377	3519	3519					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5111572146416	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0818	1	5.7031	5.2031	6.2031	0.62127								0	0	0	0.40633	1	2098	2098		8.1555	0	1				2832	7495	1366	1377	3520	3520					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5113098025322	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.303	1	5.9243	5.4243	6.4243	0.62127								0	0	0	0.3648	1	2190	2190		12.241	0	1				2833	7495	1366	1377	3521	3521					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5100890994072	3	381.512355	1141.51524	-0.21287	-8.1213E-05	-3.9276	-0.0014984	-4.1405	-0.0015796	381.5113209221234	2.3629	0.35862	3.1114	2.9286	3.2872	0.7484					31	21	2	0	0	0	0.76103	2	914	914;1047		4.897	0	1	556210			2834	7495	1366	1377	3522;3523	3522					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5110351443291	3	381.512355	1141.51524	-0.21267	-8.1135E-05	-3.8314	-0.0014617	-4.0441	-0.0015429	381.51129454827407	3.6955	0.2312	4.4408	4.3057	4.5369	0.74525					25	13	2	0	0	0	0.57699	1	1519	1519		12.241	0	1	339860			2835	7495	1366	1377	3524	3524					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5102722048759	3	381.512355	1141.51524	-0.21247	-8.1059E-05	-4.081	-0.0015569	-4.2935	-0.001638	381.8448389661199	4.1088	0.53239	4.854	4.5203	5.0527	0.74525					44	31	2	0	0	0	0.67936	1	1635	1635		8.1555	0	1	823940			2836	7495	1366	1377	3525	3525					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5108520388603	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6498	1	5.3862	4.8862	5.8862	0.73642								0	0	0	0.41189	1	1927	1927		7.609	2.2062	1				2837	7495	1366	1377	3526	3526					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5105773806572	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.004	1	12.792	12.292	13.292	0.78751								0	0	0	0.3648	1	4984	4984		12.241	0	1				2838	7495	1366	1377	3527	3527					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5114318728447	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.829	1	13.616	13.116	14.116	0.78751								0	0	0	0.40633	1	5321	5321		8.1555	0	1				2839	7495	1366	1377	3528	3528					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5106384158134	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.942	1	13.769	13.269	14.269	0.82789								0	0	0	0.37945	1	5367	5367		10.8	0	1				2840	7495	1366	1377	3529	3529					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5107910037041	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.27	1	14.098	13.598	14.598	0.82789								0	0	0	0.3648	1	5502	5502		12.241	0	1				2841	7495	1366	1377	3530	3530					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5115234255791	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.792	1	14.62	14.12	15.12	0.82789								0	0	0	0.41705	1	5718	5718		7.1017	0	1				2842	7495	1366	1377	3531	3531					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5110351443291	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.039	1	21.563	21.063	22.063	1.5237								0	0	0	0.42693	1	8331	8331		4.897	0	1				2843	7495	1366	1377	3532	3532					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5133239626884	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.295	1	22.87	22.37	23.37	1.5748								0	0	0	0.41705	1	8874	8874		7.1017	0	1				2844	7495	1366	1377	3533	3533					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5111877322197	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.529	1	24.145	23.645	24.645	1.6158								0	0	0	0.42693	1	9402	9402		4.897	0	1				2845	7495	1366	1377	3534	3534					-0.04986107572926812
DHEFDKHSK	9	Unmodified	_DHEFDKHSK_					0	0	0		ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	ENST00000592504.5_1_19:9451985-9452105:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5140258669853	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.528	1	29.304	28.804	29.804	1.7754								0	0	0	0.42693	1	11521	11521		4.897	0	1				2846	7495	1366	1377	3535	3535					-0.04986107572926812
DHEIWADEK	9	Unmodified	_DHEIWADEK_					0	0	0			REV__nc|ENSG00000105889|Q6NZ63|STEAP1B	REV__nc|ENSG00000105889|Q6NZ63|STEAP1B	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5116149783134	3	381.508611	1141.504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9802	1	8.0565	7.5565	8.5565	0.07632								0	0	0	0.40633	1	3302	3302		8.1555	0.54658	1		+		2847	9196	1367	1378	3536	3536					-0.06108929667061602
DHFHSSLGDK	10	Unmodified	_DHFHSSLGDK_					0	0	0		ENSG00000153975|ENST00000368576|ZUP1	ENSG00000153975|ENST00000368576|ZUP1	ENSG00000153975|ENST00000368576|ZUP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5115539431572	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.453	1	8.1838	7.6838	8.6838	0.73074								0	0	0	0.65644	1	3095	3095		8.4443	0.28878	1				2848	3372	1368	1379	3537	3537					-0.04986107572904075
DHFHSSLGDK	10	Unmodified	_DHFHSSLGDK_					0	0	0		ENSG00000153975|ENST00000368576|ZUP1	ENSG00000153975|ENST00000368576|ZUP1	ENSG00000153975|ENST00000368576|ZUP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5105163455009	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2014	1	8.9359	8.4359	9.4359	0.73452								0	0	0	0.65945	1	3407	3407		5.4027	0.5057	1				2849	3372	1368	1379	3538	3538					-0.04986107572904075
DHGLGAWCRQ	10	Unmodified	_DHGLGAWCRQ_					0	0	0			REV__ENST00000268607.9_1_16:87425503-87425911:+|nuORF	REV__ENST00000268607.9_1_16:87425503-87425911:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5100890994072	3	381.51018	1141.50871	0.054882	2.0938E-05	-0.085202	-3.2505E-05	-0.03032	-1.1567E-05	381.5104496456511	1.2262	3.4324	1.3732	0.14679	3.5792	0.14703					296	179	3	0	0	0	0.79426	1	1265	1265		12.873	0.69786	1	1799900	+		2850	12226	1369	1380	3539	3539					-0.056383240052809924
DHGLGAWCRQ	10	Unmodified	_DHGLGAWCRQ_					0	0	0			REV__ENST00000268607.9_1_16:87425503-87425911:+|nuORF	REV__ENST00000268607.9_1_16:87425503-87425911:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5102416872978	3	381.51018	1141.50871	-1.1538	-0.00044018	1.2508	0.00047718	0.096984	3.7001E-05	381.5109525285608	3.8283	2.3664	4.4519	2.7819	5.1483	0.62362					214	148	2	0	0	0	0.8251	1	1745	1745		9.544	3.3521	1	966510	+		2851	12226	1369	1380	3540	3540					-0.056383240052809924
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8428527712822	3	456.842212	1367.50481	0.52396	0.00023937	1.1764	0.00053745	1.7004	0.00077682	456.8429189418258	0.97899	1.921	0.97899	-0.00030207	1.9207	0					192	92	3	0	0	0	1.0362	1	510	510		1.3296	0.63198	1	2148100			2852	16369	1370	1381	3541	3541					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8436157107353	3	456.842212	1367.50481	0.52521	0.00023994	-0.22646	-0.00010345	0.29875	0.00013648	456.84226482285834	2.9587	1.3212	2.9587	2.2514	3.5726	0					117	58	3	0	0	0	1.0156	5	1251	1062;1108;1162;1251;1419		2.8433	0.63198	1	974510			2853	16369	1370	1381	3542;3543;3544;3545;3546	3545					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8419982790947	3	456.842212	1367.50481	0.52482	0.00023976	-0.21593	-9.8648E-05	0.30889	0.00014111	456.84228304719426	3.9691	0.90671	3.9691	3.2565	4.1632	0					70	36	3	0	0	0	1.0156	3	1680	1492;1546;1680		2.8433	1.5136	1	1002800			2854	16369	1370	1381	3547;3548;3549	3549					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8420593142509	3	456.842212	1367.50481	0.52279	0.00023883	0.21117	9.6473E-05	0.73396	0.00033531	456.842278113981	4.5355	0.65651	4.5355	4.1439	4.8004	0					53	28	3	0	0	0	1.0362	1	1741	1741		1.3296	0.11481	1	1469200			2855	16369	1370	1381	3550	3550					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8421813845634	3	456.842212	1367.50481	0.52467	0.00023969	-0.67683	-0.00030921	-0.15216	-6.9514E-05	456.84190627707477	7.5179	2.0624	7.5179	5.9918	8.0542	0					165	86	3	0	0	0	1.0156	4	2617	2471;2617;2951;3168		2.8433	1.251	1	1515600			2856	16369	1370	1381	3551;3552;3553;3554	3552					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8421203494072	3	456.842212	1367.50481	0.52519	0.00023993	-0.20522	-9.3754E-05	0.31997	0.00014618	456.84232973478106	8.1832	0.94828	8.1832	7.7247	8.673	0					67	40	3	0	0	0	1.0362	2	3351	3351;3395		1.3296	0.63198	1	922220			2857	16369	1370	1381	3555;3556	3555					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8427917361259	3	456.842212	1367.50481	0.52718	0.00024084	-0.075152	-3.4332E-05	0.45203	0.00020651	456.84266173778974	9.8929	3.0695	9.8929	9.4288	12.498	0					233	103	4	0	0	0	0.89163	2	4076	3978;4076		10.315	2.8382	1	4453300			2858	16369	1370	1381	3557;3558	3558					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8434326052666	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.378	1	0.378	-0.122	0.878	0								0	0	0	0.63775	1	154	154		1.3296	0.11481	1				2859	16369	1370	1381	3559	3559					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8414489626884	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0546	1	2.0546	1.5546	2.5546	0								0	0	0	0.63775	1	842	842		1.3296	0.63198	1				2860	16369	1370	1381	3560	3560					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8428832888603	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1856	1	2.1856	1.6856	2.6856	0								0	0	0	0.63775	1	897	897		1.3296	0.63198	1				2861	16369	1370	1381	3561	3561					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8432189822197	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9042	1	4.9042	4.4042	5.4042	0								0	0	0	0.63775	1	2015	2015		2.8433	0.93691	1				2862	16369	1370	1381	3562	3562					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8422424197197	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.138	1	5.138	4.638	5.638	0								0	0	0	0.63775	1	2110	2110		1.1098	0.41209	1				2863	16369	1370	1381	3563	3563					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8416931033134	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4719	1	5.4719	4.9719	5.9719	0								0	0	0	0.63775	1	2247	2247		1.3296	0.21989	1				2864	16369	1370	1381	3564	3564					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8411743044853	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3572	1	8.3572	7.8572	8.8572	0								0	0	0	0.63775	1	3437	3437		1.3296	0.63198	1				2865	16369	1370	1381	3565	3565					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8430358767509	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4837	1	8.4837	7.9837	8.9837	0								0	0	0	0.63775	1	3490	3490		2.8433	0.93691	1				2866	16369	1370	1381	3566	3566					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8413268923759	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6012	1	8.6012	8.1012	9.1012	0								0	0	0	0.63775	1	3539	3539		1.3296	0	1				2867	16369	1370	1381	3567	3567					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8418456912041	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8083	1	8.8083	8.3083	9.3083	0								0	0	0	0.63775	1	3624	3624		1.3296	0.63198	1				2868	16369	1370	1381	3568	3568					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8405334353447	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9389	1	8.9389	8.4389	9.4389	0								0	0	0	0.63775	1	3678	3678		1.3296	0.63198	1				2869	16369	1370	1381	3569	3569					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8403808474541	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0541	1	9.0541	8.5541	9.5541	0								0	0	0	0.63775	1	3726	3726		1.3296	0.11481	1				2870	16369	1370	1381	3570	3570					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8418456912041	3	456.842212	1367.50481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2822	1	9.2822	8.7822	9.7822	0								0	0	0	0.63775	1	3821	3821		1.3296	0.63198	1				2871	16369	1370	1381	3571	3571					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.8435241580009	3	456.842212	1367.50481	0.73444	0.00033553	-1.2202	-0.00055745	-0.48578	-0.00022193	456.8418863360076	9.9718	1.277	10.05	9.5609	10.838	0.077971					109	47	3	0	0	0	1.0156	2	4087	4087;4195		2.8433	0	1	1303400			2872	16369	1370	1381	3572;3573	3572					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.8429138064384	3	456.842212	1367.50481	-0.17101	-7.8126E-05	-0.23217	-0.00010606	-0.40318	-0.00018419	456.841967260779	10.024	1.2845	10.675	10.176	11.46	0.65058					94	45	3	0	0	0	1.0156	3	4146	4146;4200;4300		2.8433	1.5136	1	1187100			2873	16369	1370	1381	3574;3575;3576	3574					-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	456.842212	1367.50481	0.73408	0.00033536	-0.43052	-0.00019668	0.30356	0.00013868	457.1767992843417	3.2192	0.44127	3.3212	3.1266	3.5679	0.10199	0.18124	-0.00017829	NaN	2.8433	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	364570			2874	16369	1370	1381							-0.16424503080315844
DHNNMEEDDLH	11	Unmodified	_DHNNMEEDDLH_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	456.842212	1367.50481	0.73312	0.00033492	0.95362	0.00043565	1.6867	0.00077057	456.84185128257474	4.1429	0.2261	4.2449	4.0766	4.3027	0.10199	0.13791	0.0013199	NaN	2.8433	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164410			2875	16369	1370	1381							-0.16424503080315844
DHQKVSEWN	9	Unmodified	_DHQKVSEWN_					0	0	0			REV__nc|ENSG00000146376|Q8N392-2|ARHGAP18	REV__nc|ENSG00000146376|Q8N392-2|ARHGAP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5121948122978	3	381.512355	1141.51524	-0.090453	-3.4509E-05	-2.9254	-0.0011161	-3.0158	-0.0011506	381.51156702553504	18.475	1.5676	19.454	19.147	20.715	0.97922					90	52	2	0	0	0	0.52273	1	7803	7803		14.405	2.1647	1	1319900	+		2876	10300	1371	1382	3577	3577					-0.04986107572904075
DHRRRIFE	8	Unmodified	_DHRRRIFE_					0	0	0			REV__nc|ENSG00000095637|Q9BX66-7|SORBS1	REV__nc|ENSG00000095637|Q9BX66-7|SORBS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.8077270388603	2	564.804688	1127.59482	1.5536	0.00087749	2.4916	0.0014073	4.0452	0.0022847	564.8063324920772	93.289	0.47629	93.289	93.076	93.552	0					26	14	3	0	0	0	0.89181	1	38979	38979		0.6015	0.076735	1	658680	+		2877	8930	1372	1383	3578	3578					0.036130038917463025
DHRRRIFE	8	Unmodified	_DHRRRIFE_					0	0	0			REV__nc|ENSG00000095637|Q9BX66-7|SORBS1	REV__nc|ENSG00000095637|Q9BX66-7|SORBS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	564.804688	1127.59482	1.5536	0.00087749	2.4916	0.0014073	4.0452	0.0022847	564.8063324920772	93.289	0.47629	93.289	93.076	93.552	0	0	0	NaN	0.6015	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	658680	+		2878	8930	1372	1383							0.036130038917463025
DHSCLCAH	8	Unmodified	_DHSCLCAH_					0	0	0			REV__nc|ENSG00000090686|Q86UV5-5|USP48	REV__nc|ENSG00000090686|Q86UV5-5|USP48	MSMS	GG20161007_CRH_Patient100_A02_01	1	443.1727477908134	2	443.17073	884.326907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.9	1	102.9	102.4	103.4	0								0	0	0	1.0178	1	43134	43134		0.79363	0.10326	1		+		2879	8894	1373	1384	3579	3579					-0.11988380022535239
DHTIDAATVV	10	Unmodified	_DHTIDAATVV_					0	0	0			REV__tr|A0A553SH87|A0A553SH87_NIACIDNA-directedRNApolymerasesubunitalphaOS=NialliacirculansOX=1397GN=rpoAPE=3SV=1	REV__tr|A0A553SH87|A0A553SH87_NIACIDNA-directedRNApolymerasesubunitalphaOS=NialliacirculansOX=1397GN=rpoAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2721435427666	2	521.264196	1040.51384	2.1203	0.0011052	-0.86171	-0.00044918	1.2586	0.00065607	521.2641672977818	43.749	0.43874	45.693	45.455	45.893	1.9438					49	13	6	0	0	0	0.81324	1	18352	18352		10.824	1.4765	1	15062000	+		2880	14781	1374	1385	3580	3580					-0.004797416616611372
DHTMLHANCK	10	Unmodified	_DHTMLHANCK_					0	0	0			REV__nc|ENSG00000159871|Q6UWN5-2|LYPD5	REV__nc|ENSG00000159871|Q6UWN5-2|LYPD5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	390.511192	1168.51175	-0.42642	-0.00016652	0.35618	0.00013909	-0.070239	-2.7429E-05	390.5130352816086	32.529	0.52402	32.529	32.164	32.688	0					22	16	2	0	0	0	0.12549	1	13693	13693		1.7423	0.54893	1	207370	+		2881	10582	1375	1386	3581	3581					-0.06576816942788355
DHVLDIQAK	9	Unmodified	_DHVLDIQAK_					0	0	0			REV__tr|A0A7D6ZRF3|A0A7D6ZRF3_9CLOTBeta-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03595PE=3SV=1	REV__tr|A0A7D6ZRF3|A0A7D6ZRF3_9CLOTBeta-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03595PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1394531130791	2	519.782556	1037.55056	0.35783	0.000186	-1.1046	-0.00057416	-0.74679	-0.00038817	519.7821072214267	15.358	0.15431	16.184	16.076	16.231	0.82643					7	4	2	0	0	0	0.11719	1	6401	6401		7.2892	0	1	551220	+		2882	15689	1376	1387	3582	3582					0.0332855495489639
DHWFRNKYHVE	11	Unmodified	_DHWFRNKYHVE_					0	0	0			REV__ENST00000477204.5_1_X:135279271-135289432:+|nuORF	REV__ENST00000477204.5_1_X:135279271-135289432:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.9127075076103	3	510.912742	1529.7164	0.8699	0.00044444	-1.4386	-0.00073502	-0.56875	-0.00029058	511.24635929923744	15.811	0.2809	15.811	15.621	15.902	0					26	8	4	0	0	0	1.0362	2	6543	6543;6590		1.3296	0	1	4101000	+		2883	8560	1377	1388	3583;3584	3583					-0.027274185363921788
DHWFRNKYHVE	11	Unmodified	_DHWFRNKYHVE_					0	0	0			REV__ENST00000477204.5_1_X:135279271-135289432:+|nuORF	REV__ENST00000477204.5_1_X:135279271-135289432:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	510.912742	1529.7164	0.54832	0.00028014	-0.80934	-0.0004135	-0.26102	-0.00013336	510.9123690191197	15.109	0.21276	16.006	15.869	16.082	0.89664	0.086883	0.00028205	NaN	1.3296	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1528500	+		2884	8560	1377	1388							-0.027274185363921788
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5107604861259	3	382.178536	1143.51378	0.059994	2.2928E-05	-1.1078	-0.00042339	-1.0478	-0.00040046	382.1780953423784	1.9478	0.49964	2.0948	1.893	2.3926	0.14703					38	24	2	0	0	0	2.3239	1	856	856		10.824	0	1	360220	+		2885	9160	1378	1389	3585	3585					-0.052236968710076326
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5102722048759	3	382.178536	1143.51378	0.059987	2.2926E-05	-0.67279	-0.00025712	-0.6128	-0.0002342	382.17843005747255	7.4967	0.34881	7.573	7.3885	7.7373	0.07632					22	17	2	0	0	0	2.3239	1	3134	3134		6.7232	1.4263	1	299550	+		2886	9160	1378	1389	3586	3586					-0.052236968710076326
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5089294314384	3	382.178536	1143.51378	-1.1414	-0.00043622	-0.12006	-4.5884E-05	-1.2615	-0.0004821	382.1788635623511	0.15458	0.27257	0.82197	0.66714	0.93971	0.66738					19	12	3	0	0	0	2.3239	1	72	72		6.7232	1.4263	1	199540	+		2887	9160	1378	1389	3587	3587					-0.052236968710076326
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5117065310478	3	382.178536	1143.51378	-0.73757	-0.00028188	-1.1026	-0.00042141	-1.8402	-0.00070329	382.1781228525109	14.13	0.33229	14.899	14.67	15.002	0.76937					21	13	2	0	0	0	2.3239	1	5785	5785		6.7232	0	1	401910	+		2888	9160	1378	1389	3588	3588					-0.052236968710076326
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5116454958916	3	382.178536	1143.51378	0.42651	0.000163	-1.3705	-0.00052376	-0.94396	-0.00036076	382.1779652854503	22.78	0.091188	23.995	23.919	24.01	1.2145					4	2	2	0	0	0	2.3239	1	9514	9514		3.5965	1.098	1	124220	+		2889	9160	1378	1389	3589	3589					-0.052236968710076326
DHWFWPEK	8	Unmodified	_DHWFWPEK_					0	0	0			REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	REV__ENST00000474207.2_1_19:2984211-2987247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5108215212822	3	382.178536	1143.51378	-0.18138	-6.9321E-05	0.50288	0.00019219	0.3215	0.00012287	382.1785435867539	11.557	0.25379	12.319	12.162	12.416	0.76165					10	7	2	0	0	0	2.3239	1	4785	4785		6.7232	0	1	154460	+		2890	9160	1378	1389	3590	3590					-0.052236968710076326
DHYYMCFMWQF	11	Unmodified	_DHYYMCFMWQF_					0	0	0			REV__tr|A0A553SKB6|A0A553SKB6_NIACISporecoatproteinYsxEOS=NialliacirculansOX=1397GN=ysxEPE=4SV=1	REV__tr|A0A553SKB6|A0A553SKB6_NIACISporecoatproteinYsxEOS=NialliacirculansOX=1397GN=ysxEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1570.593798816204	1	1570.59523	1569.58795	0.85129	0.001337	3.8881	0.0061066	4.7394	0.0074436	1570.6032484018465	58.553	0.31987	59.971	59.877	60.196	1.4181					13	9	2	0	0	0	1.0393	1	24528	24528		0.35063	0	1	1906900	+		2891	14945	1379	1390	3591	3591					-0.17406181157662104
DIADKANVGR	10	Unmodified	_DIADKANVGR_					0	0	0		tr|A0A553SU82|A0A553SU82_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06440PE=4SV=1	tr|A0A553SU82|A0A553SU82_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06440PE=4SV=1	tr|A0A553SU82|A0A553SU82_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06440PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	529.3278686404228	2	529.783087	1057.55162	4.171	0.0022097	1.1313	0.00059934	5.3023	0.0028091	529.7836699216527	92.059	0.41411	92.995	92.83	93.244	0.93623					18	12	2	0	0	0	0.12384	1	38727	38727		18.146	0	1	1313100			2892	16683	1380	1391	3592	3592					0.025147693238068314
DIASKAILNV	10	Unmodified	_DIASKAILNV_					0	0	0		tr|A0A7D6VNH5|A0A7D6VNH5_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15400PE=3SV=1	tr|A0A7D6VNH5|A0A7D6VNH5_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15400PE=3SV=1	tr|A0A7D6VNH5|A0A7D6VNH5_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15400PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3106567263603	2	522.308406	1042.60226	2.0888	0.001091	1.3155	0.0006871	3.4043	0.0017781	522.3088162761709	66.502	0.25313	66.827	66.685	66.939	0.32449					11	7	2	0	0	0	0.82019	1	27824	27824		10.074	2.1638	1	651330			2893	16734	1381	1392	3593	3593					0.08266298648823067
DICQWNKMKYK	11	Unmodified	_DICQWNKMKYK_					0	0	0		ENSG00000163964|ENST00000392391|PIGX;nc|ENSG00000163964|Q8TBF5-2|PIGX	ENSG00000163964|ENST00000392391|PIGX	ENSG00000163964|ENST00000392391|PIGX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.5766174197197	3	486.240702	1455.70028	1.8103	0.00088026	0.56725	0.00027582	2.3776	0.0011561	486.24125027220526	28.905	0.57464	29.184	28.985	29.559	0.2793					42	18	4	0	0	0	1.0191	1	12079	12079		2.6312	0	1	2496100			2894	3740	1382	1393	3594	3594					-0.009345840891910484
DIDDCSSTPCL	11	Unmodified	_DIDDCSSTPCL_					0	0	0		ENSG00000134250|ENST00000256646|NOTCH2;NOTCH2|p.N844Mfs*40|1|0.03|ENSG00000134250|chr1:119949077-119949077|C/-|frameshift_variant	ENSG00000134250|ENST00000256646|NOTCH2	ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.7311889529228	2	584.728471	1167.44239	2.5531	0.0014929	2.8299	0.0016547	5.383	0.0031476	584.7301876668062	88.56	0.39732	88.56	88.365	88.762	0					45	12	6	0	0	0	1.0084	1	36995	36995		3.2813	1.2216	1	2935300			2895	2602	1383	1394	3595	3595					-0.13463365472853184
DIDTLAMAV	9	Unmodified	_DIDTLAMAV_					0	0	0			REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	948.4697143435478	1	948.47066	947.463383	1.6193	0.0015358	-1.1175	-0.0010599	0.50179	0.00047593	948.4700718841979	67.333	0.30324	67.333	67.201	67.504	0					15	9	2	0	0	0	0.09539	1	28056	28056		50.855	0	1	802560	+		2896	13881	1384	1395	3596	3596					-0.012449873110313092
DIDTLAMAV	9	Unmodified	_DIDTLAMAV_					0	0	0			REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.4770995974541	1	948.47066	947.463383	1.8492	0.0017539	-1.1894	-0.0011282	0.65971	0.00062572	948.4693631991693	67.075	0.37035	67.398	67.188	67.558	0.32269					19	12	2	0	0	0	0.24063	1	28030	28030		28.487	0	1	1119800	+		2897	13881	1384	1395	3597	3597					-0.012449873110313092
DIEEIAREWR	10	Unmodified	_DIEEIAREWR_					0	0	0		tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.5588561892509	3	439.557964	1315.65206	0.23651	0.00010396	0.16256	7.1457E-05	0.39908	0.00017542	439.5583717612682	15.978	0.28028	15.978	15.776	16.056	0					19	8	4	0	0	0	0.83529	1	6627	6627		8.4443	1.8209	1	1904200			2898	16656	1385	1396	3598	3598					0.006863815867973244
DIEEIAREWR	10	Unmodified	_DIEEIAREWR_					0	0	0		tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	439.557964	1315.65206	0.41354	0.00018178	1.4735	0.00064771	1.8871	0.00082948	439.5586146393199	15.279	0.21625	16.106	15.921	16.138	0.82643	0.068984	0.00089656	NaN	8.4443	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	489700			2899	16656	1385	1396							0.006863815867973244
DIEEIAREWR	10	Unmodified	_DIEEIAREWR_					0	0	0		tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	tr|A0A553STL5|A0A553STL5_NIACIHomocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_05105PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	439.557964	1315.65206	0.32257	0.00014179	0.78343	0.00034436	1.106	0.00048615	439.5582462231994	15.189	0.13879	16.085	15.99	16.129	0.89664	0.048379	-1.3475E-05	NaN	8.4443	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574180			2900	16656	1385	1396							0.006863815867973244
DIEYEHNMI	9	Unmodified	_DIEYEHNMI_					0	0	0			REV__tr|A0A7D6ZRT6|A0A7D6ZRT6_9CLOTWGrepeat-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13435PE=4SV=1	REV__tr|A0A7D6ZRT6|A0A7D6ZRT6_9CLOTWGrepeat-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2567016482353	2	582.255514	1162.49647	1.1993	0.00069832	-1.2083	-0.00070351	-0.0089226	-5.1953E-06	582.2554606221504	68.962	0.42151	70.815	70.588	71.009	1.853					36	13	4	0	0	0	0.27148	1	28894	28894		26.884	6.4691	1	5881000	+		2901	15694	1386	1397	3599	3599					-0.07827405258967701
DIFQKFLQL	9	Unmodified	_DIFQKFLQL_					0	0	0			REV__ENSG00000119522|ENST00000394215|DENND1A	REV__ENSG00000119522|ENST00000394215|DENND1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3278076052666	2	576.326599	1150.63865	1.497	0.00086276	-0.47191	-0.00027197	1.0251	0.00059079	576.3261019065343	70.72	0.37012	70.72	70.537	70.907	0					30	11	3	0	0	0	0.086433	2	29480	29429;29480		53.833	6.0841	1	2284500	+		2902	9542	1387	1398	3600;3601	3601					0.06935175545527272
DIFQKKEEI	9	Unmodified	_DIFQKKEEI_					0	0	0			REV__tr|A0A7D6VV57|A0A7D6VV57_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23015PE=4SV=1	REV__tr|A0A7D6VV57|A0A7D6VV57_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3135253787041	2	575.311146	1148.60774	1.634	0.00094009	-0.040622	-2.337E-05	1.5934	0.00091672	575.3107241580731	49.161	0.28263	50.552	50.36	50.643	1.3911					14	8	2	0	0	0	0.35391	1	20552	20552		22.736	0	1	2372800	+		2903	15525	1388	1399	3602	3602					0.039379774406370416
DIGDGILTL	9	Unmodified	_DIGDGILTL_					0	0	0			REV__tr|A0A7D6VTG9|A0A7D6VTG9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07960PE=4SV=1	REV__tr|A0A7D6VTG9|A0A7D6VTG9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	916.5049926638603	1	916.498589	915.491313	2.7759	0.0025441	2.0246	0.0018555	4.8004	0.0043996	916.5004566762298	69.761	0.31493	71.599	71.404	71.719	1.8378					18	9	2	0	0	0	0.033794	1	29242	29242		81.613	7.1903	1	2700400	+		2904	15486	1389	1400	3603	3603					0.030186589407207975
DIGDGILTL	9	Unmodified	_DIGDGILTL_					0	0	0			REV__tr|A0A7D6VTG9|A0A7D6VTG9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07960PE=4SV=1	REV__tr|A0A7D6VTG9|A0A7D6VTG9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07960PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	916.498589	915.491313	2.7759	0.0025441	2.0246	0.0018555	4.8004	0.0043996	916.5004566762298	69.761	0.31493	71.599	71.404	71.719	1.8378	0.0312	-0.00085402	NaN	81.613	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2700400	+		2905	15486	1389	1400							0.030186589407207975
DIGGHAIYKV	10	Unmodified	_DIGGHAIYKV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.3260986208916	2	536.792924	1071.57129	2.4516	0.001316	3.9683	0.0021302	6.42	0.0034462	536.7957050593761	39.581	0.24461	40.892	40.778	41.023	1.3102					17	8	3	0	0	0	0.12321	1	16600	16600		8.7454	0	1	4533200			2906	1782	1390	1401	3604	3604					0.038371453345462214
DIGRKVVRPR	10	Unmodified	_DIGRKVVRPR_					0	0	0			REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2506286501884	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.067	1	36.885	36.385	37.385	1.8176								0	0	0	0.66161	1	14703	14703		1.7423	0.41263	1		+		2907	9237	1391	1402	3605	3605					0.14134698402403956
DIGRKVVRPR	10	Unmodified	_DIGRKVVRPR_					0	0	0			REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	REV__nc|ENSG00000107651|Q9Y6Y8-2|SEC23IP	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2509338259697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.681	1	65.609	65.109	66.109	1.928								0	0	0	0.66082	1	26717	26717		3.0723	1.33	1		+		2908	9237	1391	1402	3606	3606					0.14134698402403956
DIHAIRFRV	9	Unmodified	_DIHAIRFRV_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1126.658007800579	1	1126.64799	1125.64071	3.1493	0.0035482	3.3198	0.0037403	6.4692	0.0072885	1126.650441975186	101.02	0.17251	101.23	101.12	101.29	0.20526					15	5	4	0	0	0	0.70108	1	42452	42452		7.2892	0.56607	1	75963000			2909	15975	1392	1403	3607	3607					0.0829164907397626
DIHAIRFRV	9	Unmodified	_DIHAIRFRV_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1126.64799	1125.64071	1.353	0.0015244	4.341	0.0048908	5.694	0.0064152	1126.653010260307	101.22	0.19714	101.22	101.12	101.32	0	-0.021956	0.0011283	NaN	7.2892	18	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80858000			2910	15975	1392	1403							0.0829164907397626
DIHQLSFLL	9	Unmodified	_DIHQLSFLL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3040038943291	2	543.303124	1084.5917	1.5379	0.00083552	-0.67279	-0.00036553	0.86506	0.00046999	543.3025810939623	65.858	0.31638	65.858	65.676	65.992	0					23	9	3	0	0	0	0.11669	1	27421	27421		43.772	1.8168	1	1380600			2911	3629	1393	1404	3608	3608					0.05278315994382865
DIHQLSFLL	9	Unmodified	_DIHQLSFLL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3039428591728	2	543.303124	1084.5917	1.9307	0.0010489	-0.48626	-0.00026419	1.4444	0.00078476	543.3027116023866	65.237	0.38406	65.564	65.356	65.74	0.32689					25	11	3	0	0	0	0.070055	1	27302	27302		60.074	16.302	1	1391100			2912	3629	1393	1404	3609	3609					0.05278315994382865
DIHQLSFLL	9	Unmodified	_DIHQLSFLL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3043701052666	2	543.303124	1084.5917	2.4232	0.0013166	-0.78934	-0.00042885	1.6339	0.0008877	543.3023778838877	63.978	0.35171	65.385	65.24	65.591	1.4071					26	10	3	0	0	0	0.037098	1	26862	26862		78.728	2.9672	1	5413100			2913	3629	1393	1404	3610	3610					0.05278315994382865
DIHVKHPAD	9	Unmodified	_DIHVKHPAD_					0	0	0		nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C;ENST00000558338.1_1_15:62199375-62209725:-|nuORF	nc|ENSG00000129003|Q709C8-4|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	515.7651244997978	2	516.267073	1030.51959	2.8319	0.001462	-3.3427	-0.0017257	-0.51077	-0.0002637	516.2657144391891	44.657	0.21837	46.022	45.9	46.118	1.3653					10	6	2	0	0	0	0.10844	1	18706	18706		16.942	6.1184	1	1448400			2914	2390	1394	1405	3611	3611					0.005554016406676965
DIISQMFFIH	10	Unmodified	_DIISQMFFIH_					0	0	0			REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|68|2|anti-sense	REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|68|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	417.2125121951103	3	417.54612	1249.61653	-0.10798	-4.5085E-05	2.0798	0.00086842	1.9718	0.00082334	417.54700848224326	22.417	1.7861	22.417	21.688	23.475	0					81	58	2	0	0	0	0.12547	1	9199	9199		1.9064	0	1	1471900	+		2915	14324	1395	1406	3612	3612					0.0017062780543710687
DIISQMFFIH	10	Unmodified	_DIISQMFFIH_					0	0	0			REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|68|2|anti-sense	REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|68|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	417.2126342654228	3	417.54612	1249.61653	0.83907	0.00035035	0.8334	0.00034798	1.6725	0.00069833	417.5468212270658	20.126	0.46413	20.336	20.103	20.567	0.21024					22	14	2	0	0	0	0.12547	1	8355	8355		3.8763	1.97	1	497290	+		2916	14324	1395	1406	3613	3613					0.0017062780543710687
DIKEQRKRKKW	11	Unmodified	_DIKEQRKRKKW_					0	0	0			REV__nc|ENSG00000065548|Q8WU90-2|ZC3H15	REV__nc|ENSG00000065548|Q8WU90-2|ZC3H15	MSMS	GG20161007_CRH_Patient100_W632_02	4	757.9510375857353	2	757.949341	1513.88413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.975	1	98.232	97.732	98.732	0.25636								0	0	0	0.63775	1	41220	41220		1.3295	1.0225	1		+		2917	8676	1396	1407	3614	3614					0.14774268728206152
DIKKVVML	8	Unmodified	_DIKKVVML_					0	0	0			REV__tr|A0A7D6ZWG3|A0A7D6ZWG3_9CLOTEutN/CcmLfamilymicrocompartmentproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17700PE=4SV=1	REV__tr|A0A7D6ZWG3|A0A7D6ZWG3_9CLOTEutN/CcmLfamilymicrocompartmentproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17700PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2959167361259	2	473.293714	944.572874	2.6198	0.0012399	-0.56842	-0.00026903	2.0513	0.00097088	473.2942974969655	63.076	0.34541	63.076	62.895	63.24	0					24	10	3	0	0	0	0.83518	1	26327	26327		18.135	1.0221	1	974250	+		2918	15747	1397	1408	3615	3615					0.098370630989848
DILKSRKKEAR	11	Unmodified	_DILKSRKKEAR_					0	0	0			REV__ENST00000464624.6_1_20:57428320-57466719:+|nuORF	REV__ENST00000464624.6_1_20:57428320-57466719:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4102050662041	2	672.409518	1342.80448	3.2649	0.0021953	-0.18861	-0.00012683	3.0762	0.0020685	672.4087617945283	82.576	1.3123	83.789	83.006	84.319	1.2125					60	41	3	0	0	0	1.0372	1	34621	34621		2.4985	1.0166	1	3323200	+		2919	13228	1398	1409	3616	3616					0.14679202054207963
DILKSRKKEAR	11	Unmodified	_DILKSRKKEAR_					0	0	0			REV__ENST00000464624.6_1_20:57428320-57466719:+|nuORF	REV__ENST00000464624.6_1_20:57428320-57466719:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4124633669853	2	672.409518	1342.80448	2.9493	0.0019831	0.61676	0.00041472	3.5661	0.0023979	672.4098364296807	82.272	1.4675	83.942	83.201	84.668	1.67					72	46	3	0	0	0	1.0372	1	34584	34584		2.4985	1.0166	1	3547500	+		2920	13228	1398	1409	3617	3617					0.14679202054207963
DILSKEVWED	10	Unmodified	_DILSKEVWED_					0	0	0		tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	617.3051025271416	2	617.303518	1232.59248	1.9884	0.0012275	0.24773	0.00015292	2.2362	0.0013804	617.3037971088635	39.743	0.30704	39.743	39.544	39.852	0					20	9	3	0	0	0	0.65659	1	16618	16618		20.415	4.2654	1	1547600			2921	17057	1399	1410	3618	3618					-0.014509341472376036
DILSKEVWED	10	Unmodified	_DILSKEVWED_					0	0	0		tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	617.3029052615166	2	617.303518	1232.59248	1.5154	0.00093548	0.69804	0.0004309	2.2135	0.0013664	617.3034952552764	39.131	0.45838	39.44	39.241	39.7	0.30857					28	14	3	0	0	0	0.31869	2	16476	16431;16476		38.176	9.6811	1	1575300			2922	17057	1399	1410	3619;3620	3620					-0.014509341472376036
DILSKEVWED	10	Unmodified	_DILSKEVWED_					0	0	0		tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	617.3057739138603	2	617.303518	1232.59248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.604	1	36.906	36.406	37.406	0.30197								0	0	0	0.34628	1	15393	15393		31.268	2.7738	1				2923	17057	1399	1410	3621	3621					-0.014509341472376036
DILSKEVWED	10	Unmodified	_DILSKEVWED_					0	0	0		tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3036376833916	2	617.303518	1232.59248	0.79203	0.00048892	0.8045	0.00049662	1.5965	0.00098555	617.3036268004857	37.807	0.26059	39.091	38.956	39.216	1.284					14	8	2	0	0	0	0.31869	1	15867	15867		38.176	9.6811	1	1165300			2924	17057	1399	1410	3622	3622					-0.014509341472376036
DILSKEVWED	10	Unmodified	_DILSKEVWED_					0	0	0		tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	tr|A0A7D6ZEX7|A0A7D6ZEX7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3033935427666	2	617.303518	1232.59248	0.5218	0.00032211	0.77174	0.0004764	1.2935	0.00079851	617.3035972443107	37.222	0.26966	39.043	38.876	39.145	1.8202					19	11	2	0	0	0	0.31869	1	15633	15633		38.176	3.2435	1	1254100			2925	17057	1399	1410	3623	3623					-0.014509341472376036
DILTLRLDV	9	Unmodified	_DILTLRLDV_					0	0	0		ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	ENSG00000171298|ENST00000302262|GAA	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7932006716728	2	529.316232	1056.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.836	1	55.237	54.737	55.737	1.4005								0	0	0	0.31526	1	22535	22535		17.113	5.4726	1				2926	4182	1400	1411	3624	3624					0.0918658516582127
DIMAIKMEDPK	11	Unmodified	_DIMAIKMEDPK_					0	0	0		ENSG00000114439|ENST00000325805|BBX;nc|ENSG00000114439|Q8WY36-2|BBX	ENSG00000114439|ENST00000325805|BBX	ENSG00000114439|ENST00000325805|BBX	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8899108767509	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.972	1	90.028	89.528	90.528	1.0562								0	0	0	0.63775	1	37502	37502		0.08335	0	1				2927	1865	1401	1412	3625	3625					0.0027121603402520122
DIMAIKMEDPK	11	Unmodified	_DIMAIKMEDPK_					0	0	0		ENSG00000114439|ENST00000325805|BBX;nc|ENSG00000114439|Q8WY36-2|BBX	ENSG00000114439|ENST00000325805|BBX	ENSG00000114439|ENST00000325805|BBX	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8903076052666	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.383	1	90.403	89.903	90.903	1.0199								0	0	0	0.63775	1	37668	37668		0.45452	0	1				2928	1865	1401	1412	3626	3626					0.0027121603402520122
DIMPHQSDV	9	Unmodified	_DIMPHQSDV_					0	0	0		nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	521.7812377810478	2	521.237124	1040.45969	2.0915	0.0010902	-3.626	-0.00189	-1.5345	-0.00079984	521.2349649116379	75.868	0.38351	75.868	75.597	75.98	0					16	11	2	0	0	0	0.11611	1	31618	31618		10.074	1.4806	1	671560			2929	7845	1402	1413	3627	3627					-0.058916570848850824
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6264526247978	3	517.289266	1548.84597	2.1937	0.0011348	1.5809	0.00081777	3.7746	0.0019525	517.6239096368689	52.824	1.495	52.824	51.756	53.251	0					97	48	3	0	0	0	1.0388	1	22060	22060		0.50596	0.051438	1	2569700	+		2930	8918	1403	1414	3628	3628					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6260253787041	3	517.289266	1548.84597	1.9497	0.0010086	1.9227	0.00099458	3.8724	0.0020032	517.6244107857391	52.166	3.1461	52.491	51.695	54.841	0.32554					243	102	4	0	0	0	1.0362	2	21939	21939;22435		1.3296	0.11481	1	3586500	+		2931	8918	1403	1414	3629;3630	3629					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6259033083916	3	517.289266	1548.84597	2.2535	0.0011657	2.6893	0.0013911	4.9428	0.0025569	517.624581144673	54.985	2.4879	55.306	54.837	57.324	0.32088					173	90	3	0	0	0	1.0191	1	23505	23505		2.6312	1.4164	1	5621700	+		2932	8918	1403	1414	3631	3631					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6263915896416	3	517.289266	1548.84597	2.0669	0.0010692	3.5519	0.0018374	5.6188	0.0029066	517.6249066093384	63.856	2.1347	64.185	63.223	65.358	0.32899					171	67	3	0	0	0	1.0362	2	27003	26638;27003		1.3296	0.35968	1	2851500	+		2933	8918	1403	1414	3632;3633	3633					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6265746951103	3	517.289266	1548.84597	1.1848	0.00061288	3.2306	0.0016711	4.4153	0.002284	517.2920179057138	52.469	1.7175	53.866	53.012	54.729	1.3966					114	57	3	0	0	0	1.0362	1	21774	21774		1.3296	0.11481	1	3126000	+		2934	8918	1403	1414	3634	3634					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2939330935478	3	517.289266	1548.84597	1.2463	0.00064471	3.4631	0.0017914	4.7094	0.0024361	517.2927430710805	51.68	1.5482	53.653	53.188	54.736	1.9722					77	51	3	0	0	0	1.0362	1	21566	21566		1.3296	0.11481	1	2870400	+		2935	8918	1403	1414	3635	3635					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2871581912041	3	517.289266	1548.84597	1.7013	0.00088004	0.64556	0.00033394	2.3468	0.001214	517.2897017428667	68.854	1.4261	70.707	70.025	71.451	1.853					98	45	3	0	0	0	1.0362	1	28918	28918		1.3296	0.21989	1	2352900	+		2936	8918	1403	1414	3636	3636					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.9579955935478	3	517.289266	1548.84597	1.2463	0.00064471	3.4631	0.0017914	4.7094	0.0024361	517.2927430710805	51.68	1.5482	53.653	53.188	54.736	1.9722					77	51	3	0	0	0	0.14606	1	21507	21507		1.3296	0.92138	1	2870400	+		2937	8918	1403	1414	3637	3637					0.09350059541884548
DINKWRFKRMR	11	Unmodified	_DINKWRFKRMR_					0	0	0			REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	REV__nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	517.289266	1548.84597	2.2646	0.0011715	3.0771	0.0015917	5.3417	0.0027632	517.6249327891177	63.831	2.6588	63.831	61.804	64.462	0	-0.17719	-0.00037303	NaN	1.3296	151	84	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1537900	+		2938	8918	1403	1414							0.09350059541884548
DIPEELCG	8	Unmodified	_DIPEELCG_					0	0	0		ENST00000464554.5_1_2:232880330-232952439:+|nuORF;GIGYF2-DIS3L2|2|fusion;nc|ENSG00000144535|Q8IYB7-4|DIS3L2;nc|ENSG00000144535|Q8IYB7-5|DIS3L2;GIGYF2-DIS3L2|3|fusion;nc|ENSG00000144535|Q8IYB7-3|DIS3L2;nc|ENSG00000144535|Q8IYB7-2|DIS3L2;GIGYF2-DIS3L2|1|fusion;ENSG00000144535|ENST00000325385|DIS3L2	ENST00000464554.5_1_2:232880330-232952439:+|nuORF	ENST00000464554.5_1_2:232880330-232952439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.1935912966728	2	438.194393	874.374234	0.36774	0.00016114	-3.2872	-0.0014404	-2.9195	-0.0012793	438.19310931772867	19.744	0.3444	19.744	19.54	19.885	0					25	10	3	0	0	0	0.89008	1	8179	8179		2.5775	2.5775	1	1760200			2939	3080	1404	1415	3638	3638					-0.06797822270550569
DIRGLLIMTE	10	Unmodified	_DIRGLLIMTE_					0	0	0		ENST00000490021.2_1_1:110230450-110231321:+|nuORF	ENST00000490021.2_1_1:110230450-110231321:+|nuORF	ENST00000490021.2_1_1:110230450-110231321:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8216430544853	2	580.820824	1159.62709	3.8948	0.0022622	-3.1715	-0.0018421	0.72327	0.00042009	580.818436850723	95.639	0.27779	96.06	95.911	96.189	0.4212					27	8	4	0	0	0	0.32206	2	40274	40226;40274		37.974	12.575	1	4167400			2940	6902	1405	1416	3639;3640	3640					0.053666104598960374
DIRGLLIMTE	10	Unmodified	_DIRGLLIMTE_					0	0	0		ENST00000490021.2_1_1:110230450-110231321:+|nuORF	ENST00000490021.2_1_1:110230450-110231321:+|nuORF	ENST00000490021.2_1_1:110230450-110231321:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8177978396416	2	580.820824	1159.62709	3.2115	0.0018653	-3.6625	-0.0021273	-0.45096	-0.00026192	580.8183577075121	95.362	0.36777	95.764	95.593	95.961	0.40208					33	13	4	0	0	0	0.44465	2	40096	40096;40146		30.637	11.38	1	3334800			2941	6902	1405	1416	3641;3642	3641					0.053666104598960374
DIRWFSGK	8	Unmodified	_DIRWFSGK_					0	0	0			REV__ENST00000571160.1_1_17:80540661-80543138:+|nuORF	REV__ENST00000571160.1_1_17:80540661-80543138:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8466064333916	3	336.846898	1007.51886	-0.30243	-0.00010187	-0.62844	-0.00021169	-0.93086	-0.00031356	336.84667748137866	15.198	0.35522	16.095	15.96	16.315	0.89664					27	11	3	0	0	0	0.8782	1	6275	6275		7.609	0	1	1546700	+		2942	10158	1406	1417	3643	3643					0.015406069916252818
DISLLHQKE	9	Unmodified	_DISLLHQKE_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7977783083916	2	541.795663	1081.57677	2.7793	0.0015058	2.1759	0.0011789	4.9552	0.0026847	541.7964775998904	79.337	0.37431	80.603	80.504	80.878	1.2668					19	11	2	0	0	0	0.39927	1	33317	33317		20.454	2.3073	1	577930	+		2943	11110	1407	1418	3644	3644					0.03924824126374915
DISLLHQKE	9	Unmodified	_DISLLHQKE_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	541.795663	1081.57677	2.7793	0.0015058	2.1759	0.0011789	4.9552	0.0026847	541.7964775998904	79.337	0.37431	80.603	80.504	80.878	1.2668	0.02563	0.00013123	NaN	20.454	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	577930	+		2944	11110	1407	1418							0.03924824126374915
DISLLHQKE	9	Unmodified	_DISLLHQKE_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.795663	1081.57677	2.1953	0.0011894	1.528	0.00082788	3.7233	0.0020173	541.7954575360194	78.817	0.49422	80.552	80.319	80.814	1.735	-0.02563	-0.00057078	NaN	20.454	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780440	+		2945	11110	1407	1418							0.03924824126374915
DISSNLIGIIK	11	Unmodified	_DISSNLIGIIK_					0	0	0			REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.5679809451103	3	391.567689	1171.68124	1.773	0.00069424	-0.69273	-0.00027125	1.0802	0.00042299	391.56737540663863	41.719	0.39879	42.038	41.826	42.225	0.31862					38	12	4	0	0	0	0.28398	1	17508	17508		22.109	2.4829	1	5507300	+		2946	15801	1408	1419	3645	3645					0.10226525883103932
DISSNLIGIIK	11	Unmodified	_DISSNLIGIIK_					0	0	0			REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	391.5679199099541	3	391.567689	1171.68124	1.7273	0.00067634	-0.59635	-0.00023351	1.1309	0.00044283	391.56737777546914	40.007	0.30542	41.317	41.148	41.453	1.3102					31	9	4	0	0	0	0.28398	1	16760	16760		22.109	5.0603	1	11748000	+		2947	15801	1408	1419	3646	3646					0.10226525883103932
DISSNLIGIIK	11	Unmodified	_DISSNLIGIIK_					0	0	0			REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.5680114626884	3	391.567689	1171.68124	1.4803	0.00057963	-0.77831	-0.00030476	0.70196	0.00027487	391.5672765214219	39.596	0.42954	41.459	41.216	41.646	1.8624					36	13	4	0	0	0	0.28398	1	16575	16575		22.109	0	1	8977600	+		2948	15801	1408	1419	3647	3647					0.10226525883103932
DISSNLIGIIK	11	Unmodified	_DISSNLIGIIK_					0	0	0			REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	391.567689	1171.68124	-0.0099757	-3.9062E-06	0.22045	8.6321E-05	0.21047	8.2415E-05	391.5678416832677	42.176	0.34246	42.176	41.98	42.322	0	0.068854	0.00068491	NaN	22.109	29	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4610700	+		2949	15801	1408	1419							0.10226525883103932
DISVLPELV	9	Unmodified	_DISVLPELV_					0	0	0		L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|216|2|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|216|2|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|216|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7850829958916	2	492.784233	983.553913	2.7266	0.0013436	-1.1768	-0.0005799	1.5498	0.00076374	492.78432092099365	60.212	0.2991	61.632	61.449	61.748	1.4196					19	9	3	0	0	0	0.24063	1	25282	25282		28.487	0	1	926070			2950	7690	1409	1420	3648	3648					0.06147805008913565
DISVVVIYF	9	Unmodified	_DISVVVIYF_					0	0	0		ENSG00000117834|ENST00000438567|SLC5A9;nc|ENSG00000117834|Q2M3M2-3|SLC5A9;nc|ENSG00000117834|Q2M3M2-2|SLC5A9	ENSG00000117834|ENST00000438567|SLC5A9	ENSG00000117834|ENST00000438567|SLC5A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7950317263603	2	527.794601	1053.57465	2.1158	0.0011167	-2.8727	-0.0015162	-0.75685	-0.00039946	527.7937096845028	70.257	0.24952	72.094	71.979	72.228	1.8378					11	7	2	0	0	0	0.66839	1	29493	29493		8.5933	0.68312	1	1338000			2951	2023	1410	1421	3649	3649					0.05000395388583456
DITAFVQVF	9	Unmodified	_DITAFVQVF_					0	0	0		tr|A0A7D6W3I1|A0A7D6W3I1_9CLOTTerminaselargesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_10165PE=4SV=1	tr|A0A7D6W3I1|A0A7D6W3I1_9CLOTTerminaselargesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_10165PE=4SV=1	tr|A0A7D6W3I1|A0A7D6W3I1_9CLOTTerminaselargesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_10165PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1039.548388659954	1	1039.54587	1038.5386	3.2162	0.0033434	-0.2939	-0.00030552	2.9223	0.0030379	1039.5452938654078	76.762	0.41537	78.529	78.288	78.704	1.7672					28	12	3	0	0	0	0.037761	1	32140	32140		78.149	7.0158	1	4260600			2952	17045	1411	1422	3650	3650					0.020869382117098212
DITDIVPCV	9	Carbamidomethyl (C)	_DITDIVPC(Carbamidomethyl (C))V_	DITDIVPC(1)V		DITDIVPC(44)V		0	1	0			REV__ENSG00000257594|ENST00000529983|GALNT4	REV__ENSG00000257594|ENST00000529983|GALNT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2601196169853	2	516.257525	1030.5005	2.6661	0.0013764	1.7236	0.00088984	4.3897	0.0022662	516.2587772469141	44.402	0.32265	45.767	45.577	45.9	1.3653					25	9	3	0	0	0	0.11478	1	18626	18626		44.407	6.2314	1	2650100	+		2953	11977	1412	1423	3651	3651	21				-0.013533157652545924
DITDIVPCV	9	Carbamidomethyl (C)	_DITDIVPC(Carbamidomethyl (C))V_					0	1	0			REV__ENSG00000257594|ENST00000529983|GALNT4	REV__ENSG00000257594|ENST00000529983|GALNT4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	516.257525	1030.5005	2.6661	0.0013764	1.7236	0.00088984	4.3897	0.0022662	516.2587772469141	44.402	0.32265	45.767	45.577	45.9	1.3653	0.018265	0.00048314	NaN	44.407	25	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2650100	+		2954	11977	1412	1423			21				-0.013533157652545924
DITSLDKADYR	11	Unmodified	_DITSLDKADYR_					0	0	0		nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.8853027224541	3	432.885858	1295.63574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.263	1	17.263	16.763	17.763	0								0	0	0	0.63773	1	7165	7165		9.2438	2.2067	1				2955	3328	1413	1424	3652	3652					-0.00024744369966356317
DITSLDKADYR	11	Unmodified	_DITSLDKADYR_					0	0	0		nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	MSMS	GG20161007_CRH_Patient100_A02_02	2	432.8851196169853	3	432.885858	1295.63574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.977	1	17.128	16.628	17.628	0.15093								0	0	0	0.63773	1	7043	7043		9.2438	2.2067	1				2956	3328	1413	1424	3653	3653					-0.00024744369966356317
DITSLDKADYR	11	Unmodified	_DITSLDKADYR_					0	0	0		nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.8845703005791	3	432.885858	1295.63574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.222	1	17.048	16.548	17.548	0.82643								0	0	0	0.63769	1	6744	6744		12.856	2.5407	1				2957	3328	1413	1424	3654	3654					-0.00024744369966356317
DITSLDKADYR	11	Unmodified	_DITSLDKADYR_					0	0	0		nc|ENSG00000152457|Q96SD1-2|DCLRE1C;nc|ENSG00000152457|Q96SD1-3|DCLRE1C;ENSG00000152457|ENST00000378278|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	nc|ENSG00000152457|Q96SD1-2|DCLRE1C	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.8858215212822	3	432.885858	1295.63574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.436	1	17.328	16.828	17.828	0.89156								0	0	0	0.63775	1	6834	6834		6.6235	1.9075	1				2958	3328	1413	1424	3655	3655					-0.00024744369966356317
DIVHSGLAY	9	Unmodified	_DIVHSGLAY_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7517883181572	2	487.750724	973.486896	1.5493	0.00075568	-1.0958	-0.00053449	0.45349	0.00022119	487.7500704694108	38.252	0.3272	38.252	38.047	38.375	0					29	12	3	0	0	0	0.045797	1	15987	15987		71.134	20.279	1	6543100			2959	3217	1414	1425	3656	3656					-0.0009080548219344564
DIVHSGLAY	9	Unmodified	_DIVHSGLAY_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7507202029228	2	487.750724	973.486896	2.2728	0.0011086	-1.8561	-0.0009053	0.41673	0.00020326	487.74998928647665	37.798	0.25486	38.103	37.938	38.193	0.30497					19	9	3	0	0	0	0.059546	2	15872	15872;15919		64.236	13.381	1	2146300			2960	3217	1414	1425	3657;3658	3657					-0.0009080548219344564
DIVHSGLAY	9	Unmodified	_DIVHSGLAY_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7514526247978	2	487.750724	973.486896	0.27571	0.00013448	-0.11039	-5.3844E-05	0.16532	8.0634E-05	487.7510092636836	36.566	0.29525	37.842	37.691	37.986	1.2762					16	12	2	0	0	0	0.13873	1	15378	15378		39.957	5.8549	1	1206700			2961	3217	1414	1425	3659	3659					-0.0009080548219344564
DIVHSGLAY	9	Unmodified	_DIVHSGLAY_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7517883181572	2	487.750724	973.486896	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.056	1	37.873	37.373	38.373	1.8176								0	0	0	0.029679	1	15120	15120		71.134	29.039	1				2962	3217	1414	1425	3660	3660					-0.0009080548219344564
DKALPCWCPH	10	Unmodified	_DKALPCWCPH_					0	0	0		chr1:222041922-222058414|262|10.52|0.22|5.61|-|0|LINC01705,LINC01705|1	chr1:222041922-222058414|262|10.52|0.22|5.61|-|0|LINC01705,LINC01705|1	chr1:222041922-222058414|262|10.52|0.22|5.61|-|0|LINC01705,LINC01705|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2839233279228	3	390.512533	1168.51577	0.13616	5.317E-05	-3.7748	-0.0014741	-3.6387	-0.001421	390.84447668748606	9.9181	0.49645	9.9961	9.6962	10.193	0.077971					27	16	2	0	0	0	0.12549	1	4153	4153		1.7423	0	1	373470			2963	169	1415	1426	3661	3661					-0.06174727449092643
DKEALYTRIG	10	Unmodified	_DKEALYTRIG_					0	0	0			REV__tr|A0A7D6VMX4|A0A7D6VMX4_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15180PE=4SV=1	REV__tr|A0A7D6VMX4|A0A7D6VMX4_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3130370974541	2	583.31422	1164.61389	1.3942	0.00081323	-2.1119	-0.0012319	-0.71773	-0.00041866	583.3117834294231	50.279	0.38754	52.256	52.039	52.427	1.9772					36	12	4	0	0	0	0.21129	1	21045	21045		47.594	14.809	1	10434000	+		2964	15325	1416	1427	3662	3662					0.03816495672117526
DKFHEKKFNYF	11	Unmodified	_DKFHEKKFNYF_					0	0	0			REV__tr|A0A7D6VTP5|A0A7D6VTP5_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22060PE=4SV=1	REV__tr|A0A7D6VTP5|A0A7D6VTP5_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22060PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	751.8766357302666	2	751.874976	1501.7354	0.37393	0.00028115	-3.4251	-0.0025753	-3.0512	-0.0022941	751.8724194418138	52.903	0.2275	54.872	54.77	54.997	1.9697					31	14	3	0	0	0	0.77451	1	22139	22139		16.149	0.90062	1	8496100	+		2965	15496	1417	1428	3663	3663					0.004601180346526235
DKFSLVLI	8	Unmodified	_DKFSLVLI_					0	0	0		nc|ENSG00000120519|Q0GE19-3|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	934.5605346560478	1	934.560795	933.553519	1.5405	0.0014397	-1.5772	-0.001474	-0.036678	-3.4278E-05	934.5598055261652	79.846	0.2499	81.563	81.413	81.663	1.7167					12	7	2	0	0	0	0.64178	1	33492	33492		36.127	2.0246	1	1265900			2966	2106	1418	1429	3664	3664					0.08408430079703066
DKGRYKFKRR	10	Unmodified	_DKGRYKFKRR_					0	0	0			REV__ENSG00000185467|ENST00000327442|KPNA7	REV__ENSG00000185467|ENST00000327442|KPNA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3979980349541	2	677.396744	1352.77894	3.4726	0.0023523	-2.1095	-0.001429	1.3631	0.00092335	677.3954511194552	82.437	1.1918	83.649	82.728	83.92	1.2125					59	37	2	0	0	0	0.89803	1	34602	34602		1.4819	0	1	2089600	+		2967	11465	1419	1430	3665	3665					0.11665772322407975
DKIAALRM	8	Unmodified	_DKIAALRM_					0	0	0		ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	459.2663452029228	2	459.265487	916.516422	2.7778	0.0012757	1.3592	0.00062424	4.137	0.0019	459.2661841539265	75.415	0.40201	76.721	76.585	76.987	1.3063					35	12	4	0	0	0	0.88663	1	31671	31671		4.756	2.1785	1	8284900			2968	4065	1420	1431	3666	3666					0.05482435262297258
DKIKRKKRVHR	11	Unmodified	_DKIKRKKRVHR_					0	0	0			REV__ENST00000533834.1_1_1:104080032-104087738:+|nuORF	REV__ENST00000533834.1_1_1:104080032-104087738:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	366.4904968142509	4	366.740297	1462.93208	0.4273	0.00015671	2.877	0.0010551	3.3043	0.0012118	366.7413999315438	35.964	0.1962	37.782	37.675	37.871	1.8176					10	8	2	0	0	0	0.14606	1	15067	15067		0.08335	0.08335	1	2269400	+		2969	11482	1421	1432	3667	3667					0.2191338743889446
DKIPLTKV	8	Unmodified	_DKIPLTKV_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	GG20161007_CRH_Patient100_A02_01	1	305.1962158083916	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.188	1	77.188	76.688	77.688	0								0	0	0	1.0178	1	32133	32133		1.4819	0	1				2970	5034	1422	1433	3668	3668					0.10463832454001931
DKIPLTKV	8	Unmodified	_DKIPLTKV_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	GG20161007_CRH_Patient100_A02_01	1	305.1961547732353	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.355	1	77.355	76.855	77.855	0								0	0	0	1.0178	1	32203	32203		1.4819	0	1				2971	5034	1422	1433	3669	3669					0.10463832454001931
DKIPLTKV	8	Unmodified	_DKIPLTKV_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	GG20161007_CRH_Patient100_A02_01	1	305.1961852908134	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.481	1	77.481	76.981	77.981	0								0	0	0	1.0178	1	32255	32255		1.4819	0	1				2972	5034	1422	1433	3670	3670					0.10463832454001931
DKIPLTKV	8	Unmodified	_DKIPLTKV_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.1961547732353	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.899	1	77.193	76.693	77.693	1.2938								0	0	0	1.0178	1	31858	31858		1.4819	0	1				2973	5034	1422	1433	3671	3671					0.10463832454001931
DKIVISKVV	9	Unmodified	_DKIVISKVV_					0	0	0		ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	ENSG00000165632|ENST00000344293|TAF3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	500.2910644412041	2	500.823692	999.632832	3.1743	0.0015898	1.5602	0.00078137	4.7345	0.0023711	500.8243767610809	64.716	0.36899	66.124	65.894	66.263	1.4071					17	11	2	0	0	0	0.1132	1	27106	27106		12.241	0	1	858930			2974	3848	1423	1434	3672	3672					0.1330007703385263
DKKGKKKRMK	10	Unmodified	_DKKGKKKRMK_					0	0	0			REV__ENST00000390428.3_3_14:22237170-22237224:+|nuORF	REV__ENST00000390428.3_3_14:22237170-22237224:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8921386599541	2	623.892449	1245.77035	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.22	1	102.41	101.91	102.91	0.19076								0	0	0	0.66185	1	42987	42987		1.3295	0.13619	1		+		2975	12791	1424	1435	3673	3673					0.15729082361599467
DKKRERRKKKY	11	Unmodified	_DKKRERRKKKY_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	307.7905151247978	5	307.791592	1533.92158	-2.5328	-0.00077956	-0.42668	-0.00013133	-2.9594	-0.00091089	307.79138256412585	35.021	0.57283	35.021	34.68	35.253	0					72	28	4	0	0	0	1.0402	1	14566	14566		0.073264	0.073264	1	7822700			2976	2226	1425	1436	3674	3674					0.17597359993828832
DKKRERRKKKY	11	Unmodified	_DKKRERRKKKY_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.6479369997978	3	512.314469	1533.92158	1.458	0.00074697	-0.72701	-0.00037246	0.73103	0.00037452	512.6483901035541	33.313	0.65537	33.61	33.369	34.024	0.29701					28	21	2	0	0	0	1.0402	1	13991	13991		0.094841	0	1	694660			2977	2226	1425	1436	3675	3675					0.17597359993828832
DKKRERRKKKY	11	Unmodified	_DKKRERRKKKY_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		5	307.791592	1533.92158	0.6747	0.00020767	-2.1494	-0.00066157	-1.4747	-0.00045391	307.99153892961704	34.514	0.51137	34.814	34.542	35.054	0.29942	-0.10351	-0.0010181	NaN	0.073264	44	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3490600			2978	2226	1425	1436							0.17597359993828832
DKKRKKIPQQ	10	Unmodified	_DKKRKKIPQQ_					0	0	0		TXNDC9-EIF5B|1|fusion;ENSG00000158417|ENST00000289371|EIF5B	TXNDC9-EIF5B|1|fusion	TXNDC9-EIF5B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.5993530154228	3	423.598094	1267.77245	3.27	0.0013852	-1.0709	-0.00045364	2.1991	0.00093152	423.59755158570863	93.254	0.59981	94.531	94.228	94.828	1.277					60	18	5	0	0	0	0.89803	1	39311	39311		0.56317	0.29415	1	13168000			2979	17347	1426	1437	3676	3676					0.14927834371087556
DKKRKLKRKRQ	11	Unmodified	_DKKRKLKRKRQ_					0	0	0			REV__IGSF9B|p.L1050Afs*16|1|0.11|ENSG00000080854|chr11:133920577-133920578|-/C|frameshift_variant	REV__IGSF9B|p.L1050Afs*16|1|0.11|ENSG00000080854|chr11:133920577-133920578|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	742.1937133669853	2	742.486425	1482.9583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.46	1	102.63	102.13	103.13	0.16445								0	0	0	0.63775	1	43132	43132		0.26902	0.26902	1		+		2980	8810	1427	1438	3677	3677					0.2361365661038235
DKKRKPNRK	9	Unmodified	_DKKRKPNRK_					0	0	0			REV__ENSG00000031691|ENST00000335783|CENPQ	REV__ENSG00000031691|ENST00000335783|CENPQ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3669921755791	2	585.364913	1168.71527	2.4564	0.0014379	-0.77437	-0.00045329	1.682	0.0009846	585.3645768603548	85.525	0.77782	85.777	85.259	86.037	0.25227					51	24	3	0	0	0	0.85019	1	35752	35752		0.52476	0.066424	1	1261800	+		2981	8577	1428	1439	3678	3678					0.13766411885330854
DKLFGFSLI	9	Unmodified	_DKLFGFSLI_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	520.7526733279228	2	520.294768	1038.57498	3.3609	0.0017486	0.16661	8.6684E-05	3.5275	0.0018353	520.2955469682157	72.659	0.46631	73.989	73.822	74.288	1.3297					30	14	3	0	0	0	0.076673	1	30570	30570		22.736	3.4793	1	6680400	+		2982	15655	1429	1440	3679	3679					0.057238151084447964
DKLTFSFER	9	Unmodified	_DKLTFSFER_					0	0	0			REV__ENSG00000198056|ENST00000338193|PRIM1	REV__ENSG00000198056|ENST00000338193|PRIM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	571.8340942263603	2	571.795663	1141.57677	2.8797	0.0016466	0.21204	0.00012125	3.0917	0.0017678	572.2955644899224	62.054	0.31718	63.471	63.27	63.588	1.4177					12	9	2	0	0	0	0.10591	1	26070	26070		19.257	2.1441	1	699780	+		2983	11700	1430	1441	3680	3680					0.011648241263856107
DKNQNNIIK	9	Unmodified	_DKNQNNIIK_					0	0	0			REV__tr|A0A7D6VTX3|A0A7D6VTX3_9CLOTFlagellarhook-lengthcontrolproteinFliKOS=ClostridiumintestinaleOX=36845GN=HZF06_04625PE=4SV=1	REV__tr|A0A7D6VTX3|A0A7D6VTX3_9CLOTFlagellarhook-lengthcontrolproteinFliKOS=ClostridiumintestinaleOX=36845GN=HZF06_04625PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8014404177666	2	543.798737	1085.58292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.561	1	12.651	12.151	13.151	0.089381								0	0	0	0.41514	1	5214	5214		7.2892	1.5288	1		+		2984	15504	1431	1442	3681	3681					0.0435534235787145
DKPKVIIV	8	Unmodified	_DKPKVIIV_					0	0	0		nc|ENSG00000196954|P49662-2|CASP4;ENSG00000196954|ENST00000444739|CASP4;nc|ENSG00000196954|P49662-4|CASP4;ENST00000524843.5_1_11:104820261-104839261:-|nuORF;nc|ENSG00000137757|P51878-3|CASP5;nc|ENSG00000137757|P51878-6|CASP5;nc|ENSG00000137757|P51878-2|CASP5;ENSG00000137757|ENST00000260315|CASP5;nc|ENSG00000137757|P51878-5|CASP5	nc|ENSG00000196954|P49662-2|CASP4	nc|ENSG00000196954|P49662-2|CASP4	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5364257693291	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.665	1	23.88	23.38	24.38	1.2145								0	0	0	1.0178	1	9472	9472		0.45834	0	1				2985	4971	1432	1443	3682	3682					0.1262842283366581
DKRKERKRIYR	11	Unmodified	_DKRKERKRIYR_					0	0	0			REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1275817751884	4	387.736483	1546.91683	0.60731	0.00023548	1.7908	0.00069437	2.3981	0.00092985	387.7369394335257	85.081	0.75899	85.081	84.813	85.572	0					38	23	2	0	0	0	0.14606	1	35626	35626		0.073264	0.073264	1	1142100	+		2986	14130	1433	1444	3683	3683					0.16524475851088027
DKRKVCTH	8	Unmodified	_DKRKVCTH_					0	0	0		tr|A0A553SH35|A0A553SH35_NIACIRegucalcinOS=NialliacirculansOX=1397GN=CEQ21_12065PE=3SV=1	tr|A0A553SH35|A0A553SH35_NIACIRegucalcinOS=NialliacirculansOX=1397GN=CEQ21_12065PE=3SV=1	tr|A0A553SH35|A0A553SH35_NIACIRegucalcinOS=NialliacirculansOX=1397GN=CEQ21_12065PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	329.5110351443291	3	329.511521	985.512734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.887	1	55.208	54.708	55.708	0.32088								0	0	0	1.0178	1	22984	22984		3.5965	0	1				2987	16132	1434	1445	3684	3684					0.01939765488430112
DKRVKLASVIH	11	Unmodified	_DKRVKLASVIH_					0	0	0			REV__tr|A0A553SFT4|A0A553SFT4_NIACIlipoate--proteinligaseOS=NialliacirculansOX=1397GN=CEQ21_09455PE=4SV=1	REV__tr|A0A553SFT4|A0A553SFT4_NIACIlipoate--proteinligaseOS=NialliacirculansOX=1397GN=CEQ21_09455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1965515017509	4	317.197665	1264.76155	-2.1736	-0.00068946	-0.29898	-9.4837E-05	-2.4726	-0.00078429	317.19748137113305	43.264	1.396	43.264	42.509	43.905	0					123	44	4	0	0	0	1.0282	1	18206	18206		2.084	0.34169	1	4009700	+		2988	14719	1435	1446	3685	3685					0.13976431996798055
DKRVRRKRVSK	11	Unmodified	_DKRVRRKRVSK_					0	0	0			REV__nc|ENSG00000153132|O14967-2|CLGN	REV__nc|ENSG00000153132|O14967-2|CLGN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1998168826103	3	476.639176	1426.8957	2.5911	0.001235	1.1994	0.00057166	3.7904	0.0018067	476.63860855831985	53.251	0.50301	53.573	53.379	53.882	0.32283					22	15	2	0	0	0	0.14606	1	22418	22418		0.094841	0	1	1842700	+		2989	10444	1436	1447	3686	3686					0.19932510542207638
DKSRPKRAGRR	11	Unmodified	_DKSRPKRAGRR_					0	0	0			REV__ENST00000343805.10_1_2:231134588-231134648:+|nuORF	REV__ENST00000343805.10_1_2:231134588-231134648:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8945800662041	2	663.8949	1325.77525	1.2234	0.00081219	1.4302	0.00094953	2.6536	0.0017617	663.8957189276996	79.95	1.2678	81.667	80.612	81.879	1.7167					73	40	3	0	0	0	1.0174	1	33554	33554		2.7352	1.2533	1	1946900	+		2990	12512	1437	1448	3687	3687					0.12539102548589653
DKTILIRY	8	Unmodified	_DKTILIRY_					0	0	0			REV__nc|ENSG00000152061|Q5R372-4|RABGAP1L	REV__nc|ENSG00000152061|Q5R372-4|RABGAP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	510.8452941775322	2	511.305667	1020.59678	1.7152	0.000877	2.151	0.0010998	3.8662	0.0019768	511.30673194731867	68.414	0.24681	68.736	68.566	68.813	0.32223					12	7	2	0	0	0	2.3239	1	28603	28603		11.64	0.81637	1	397420	+		2991	10411	1438	1449	3688	3688					0.08730619856999056
DKTLGQRF	8	Unmodified	_DKTLGQRF_					0	0	0			REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF	REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1798889040947	3	322.178536	963.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.9	1	105.96	105.46	106.46	0.05455								0	0	0	1.0178	1	45013	45013		1.4819	0	1		+		2992	11411	1439	1450	3689	3689					0.030563031290057552
DKTLIPLTL	9	Unmodified	_DKTLIPLTL_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3170959353447	2	507.3157	1012.61685	2.7379	0.001389	0.28309	0.00014362	3.021	0.0015326	507.3158560087515	58.313	0.21954	58.636	58.524	58.744	0.32298					10	6	2	0	0	0	0.28372	1	24449	24449		26.268	1.2772	1	612890	+		2993	12029	1440	1451	3690	3690					0.11104370796954299
DKTLIPLTL	9	Unmodified	_DKTLIPLTL_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	507.3157	1012.61685	2.2122	0.0011223	0.74184	0.00037635	2.954	0.0014986	507.3164503666828	58.894	0.22112	58.894	58.784	59.005	0	0.26588	6.1844E-05	NaN	26.268	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	548750	+		2994	12029	1440	1451							0.11104370796954299
DKTLIPLTL	9	Unmodified	_DKTLIPLTL_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	507.3157	1012.61685	2.7379	0.001389	0.28309	0.00014362	3.021	0.0015326	507.3158560087515	58.313	0.21954	58.636	58.524	58.744	0.32298	0.0078651	-0.00040362	NaN	26.268	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612890	+		2995	12029	1440	1451							0.11104370796954299
DKTLIPLTL	9	Unmodified	_DKTLIPLTL_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	507.3157	1012.61685	1.7542	0.00088996	0.87098	0.00044186	2.6252	0.0013318	507.31609449589	57.097	0.23695	58.511	58.4	58.637	1.4145	-0.11703	0.00019287	NaN	26.268	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2449700	+		2996	12029	1440	1451							0.11104370796954299
DKTLIPLTL	9	Unmodified	_DKTLIPLTL_					0	0	0			REV__ENSG00000282757|ENST00000633875|DUXB	REV__ENSG00000282757|ENST00000633875|DUXB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.3157	1012.61685	1.051	0.0005332	1.0253	0.00052015	2.0763	0.0010534	507.31621981246803	56.503	0.30012	58.472	58.303	58.603	1.9684	-0.15671	0.00034946	NaN	26.268	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3598400	+		2997	12029	1440	1451							0.11104370796954299
DKWEDDSRN	9	Unmodified	_DKWEDDSRN_					0	0	0		MOV10L1|p.A717Hfs*7|1|0.08|ENSG00000073146|chr22:50142158-50142158|G/-|frameshift_variant;nc|ENSG00000073146|Q9BXT6-5|MOV10L1;nc|ENSG00000073146|Q9BXT6-4|MOV10L1;ENSG00000073146|ENST00000262794|MOV10L1	MOV10L1|p.A717Hfs*7|1|0.08|ENSG00000073146|chr22:50142158-50142158|G/-|frameshift_variant	MOV10L1|p.A717Hfs*7|1|0.08|ENSG00000073146|chr22:50142158-50142158|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	582.8200561404228	2	582.749441	1163.48433	1.7282	0.0010071	-1.6014	-0.0009332	0.1268	7.3893E-05	582.748923317593	67.003	0.25027	68.391	68.246	68.496	1.3888					11	7	2	0	0	0	0.11568	1	28096	28096		10.824	0.75	1	650050			2998	897	1441	1452	3691	3691					-0.0908730567780367
DKWLRNIIKEP	11	Unmodified	_DKWLRNIIKEP_					0	0	0			REV__tr|A0A553SHY9|A0A553SHY9_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13875PE=3SV=1	REV__tr|A0A553SHY9|A0A553SHY9_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13875PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	706.4095336794853	2	706.406444	1410.79833	3.0746	0.0021719	0.52742	0.00037258	3.6021	0.0025445	706.4071338997586	86.551	0.34063	87.678	87.512	87.853	1.1265					29	12	3	0	0	0	0.88359	1	36488	36488		10.8	0	1	5130700	+		2999	14828	1442	1453	3692	3692					0.10936683822683335
DKWLRNIIKEP	11	Unmodified	_DKWLRNIIKEP_					0	0	0			REV__tr|A0A553SHY9|A0A553SHY9_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13875PE=3SV=1	REV__tr|A0A553SHY9|A0A553SHY9_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13875PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	706.9105102419853	2	706.406444	1410.79833	3.2255	0.0022785	-0.79706	-0.00056305	2.4284	0.0017154	706.9066565460847	86.062	0.3187	87.609	87.535	87.854	1.547					26	11	3	0	0	0	0.88359	1	36264	36264		10.8	0	1	3670200	+		3000	14828	1442	1453	3693	3693					0.10936683822683335
DKYEQNDMK	9	Unmodified	_DKYEQNDMK_					0	0	0			REV__nc|ENSG00000137948|Q58F21-5|BRDT	REV__nc|ENSG00000137948|Q58F21-5|BRDT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2844421267509	3	390.841372	1169.50229	0.20681	8.083E-05	1.7863	0.00069817	1.9931	0.000779	390.8435975789552	20.032	0.4378	21.09	20.762	21.2	1.0585					17	13	2	0	0	0	0.11852	1	8267	8267		4.5289	1.7937	1	191790	+		3001	10037	1443	1454	3694	3694					-0.07568306747316456
DKYKGKLK	8	Unmodified	_DKYKGKLK_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	490.3023254275322	2	490.300384	978.586216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.156	1	62.486	61.986	62.986	0.32974								0	0	0	1.0178	1	26041	26041		0.79363	0	1		+		3002	8649	1444	1455	3695	3695					0.0960663720256889
DLAKELEMEK	10	Unmodified	_DLAKELEMEK_					0	0	0		tr|A0A553SRG4|A0A553SRG4_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_01045PE=4SV=1	tr|A0A553SRG4|A0A553SRG4_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_01045PE=4SV=1	tr|A0A553SRG4|A0A553SRG4_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_01045PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1802856326103	3	402.540923	1204.60094	-0.90577	-0.00036461	-0.77481	-0.00031189	-1.6806	-0.0006765	402.5407203961206	13.996	0.21249	13.996	13.919	14.131	0					15	6	3	0	0	0	0.12551	1	5832	5832		3.3196	1.7274	1	1443500			3003	16554	1445	1456	3696	3696					0.006822964977345691
DLDDCYNEI	9	Unmodified	_DLDDCYNEI_					0	0	0			REV__TSPAN15|p.Y136C|1|0.56|ENSG00000099282|chr10:69495643-69495643|A/G|missense_variant	REV__TSPAN15|p.Y136C|1|0.56|ENSG00000099282|chr10:69495643-69495643|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2198364138603	2	550.216054	1098.41756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.454	1	93.39	92.89	93.89	0.93623								0	0	0	0.42693	1	38931	38931		2.0598	1.2661	1		+		3004	15927	1446	1457	3697	3697					-0.12771677283944882
DLDGHPNS	8	Unmodified	_DLDGHPNS_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	854.3635742068291	1	854.363886	853.35661	3.107	0.0026545	-4.0055	-0.0034221	-0.89846	-0.00076762	854.3601512269914	100.18	0.17619	100.36	100.26	100.44	0.18047					15	5	4	0	0	0	0.88587	1	42150	42150		5.2307	0.47466	1	38238000			3005	673	1447	1458	3698	3698					-0.07593401481187811
DLDGHPNS	8	Unmodified	_DLDGHPNS_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	854.3649169802666	1	854.363886	853.35661	3.0457	0.0026022	-2.5117	-0.0021459	0.53407	0.00045629	854.3606420208274	100.59	0.13886	100.77	100.68	100.82	0.18047					6	4	2	0	0	0	0.88587	1	42309	42309		5.2307	0.90143	1	6826400			3006	673	1447	1458	3699	3699					-0.07593401481187811
DLDHQGINSSL	11	Unmodified	_DLDHQGINSSL_					0	0	0			REV__ENSG00000122033|ENST00000381120|MTIF3	REV__ENSG00000122033|ENST00000381120|MTIF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7930786013603	2	599.788566	1197.56258	2.7779	0.0016661	1.6912	0.0010144	4.4691	0.0026805	599.7912059847887	78.727	0.437	79.994	79.787	80.224	1.2668					41	13	4	0	0	0	0.37492	1	33049	33049		27.629	3.6082	1	7558000	+		3007	9602	1448	1459	3700	3700					-0.028298730925598647
DLDHQGINSSL	11	Unmodified	_DLDHQGINSSL_					0	0	0			REV__ENSG00000122033|ENST00000381120|MTIF3	REV__ENSG00000122033|ENST00000381120|MTIF3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	599.788566	1197.56258	2.7779	0.0016661	1.6912	0.0010144	4.4691	0.0026805	599.7912059847887	78.727	0.437	79.994	79.787	80.224	1.2668	0.00082333	-0.0003731	NaN	27.629	41	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7558000	+		3008	9602	1448	1459							-0.028298730925598647
DLENQVDLCSK	11	Unmodified	_DLENQVDLCSK_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2035705447197	3	421.867699	1262.58127	0.72144	0.00030435	3.515	0.0014829	4.2364	0.0017872	422.2018891355476	17.195	0.47398	17.345	17.151	17.625	0.15093					25	17	2	0	0	0	1.0084	1	7117	7117		1.3296	0	1	719580			3009	2055	1449	1460	3701	3701					-0.03952079513010176
DLEQRYWK	8	Unmodified	_DLEQRYWK_					0	0	0		KDM4E|p.P214Sfs*23|1|0.09|ENSG00000235268|chr11:95026196-95026197|-/T|frameshift_variant;ENSG00000235268|ENST00000450979|KDM4E;ENSG00000255855|ENST00000545950|KDM4F	KDM4E|p.P214Sfs*23|1|0.09|ENSG00000235268|chr11:95026196-95026197|-/T|frameshift_variant	KDM4E|p.P214Sfs*23|1|0.09|ENSG00000235268|chr11:95026196-95026197|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.8604919314384	3	379.861096	1136.56146	-0.21998	-8.3561E-05	-1.0065	-0.00038233	-1.2265	-0.00046589	379.8596641021858	18.243	0.3445	19.223	19.024	19.369	0.97922					21	11	3	0	0	0	0.88504	1	7623	7623		3.9444	1.5096	1	894150			3010	5315	1450	1461	3702	3702					-0.001360426708288287
DLEREVDEL	9	Unmodified	_DLEREVDEL_					0	0	0			REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2695800662041	2	559.272218	1116.52988	1.5083	0.00084358	-2.2144	-0.0012384	-0.70604	-0.00039487	559.270379227178	48.203	0.28068	48.203	48.092	48.373	0					12	8	2	0	0	0	0.66458	1	20155	20155		8.7454	1.4562	1	312180	+		3011	11504	1451	1462	3703	3703					-0.023720802154230114
DLEREVDEL	9	Unmodified	_DLEREVDEL_					0	0	0			REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	REV__ENST00000586585.1_1_18:32953773-32954277:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	559.272218	1116.52988	1.5083	0.00084358	-2.2144	-0.0012384	-0.70604	-0.00039487	559.270379227178	48.203	0.28068	48.203	48.092	48.373	0	0.043247	0.0011531	NaN	8.7454	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	312180	+		3012	11504	1451	1462							-0.023720802154230114
DLFKDIQSL	9	Unmodified	_DLFKDIQSL_					0	0	0		ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7930786013603	2	539.792589	1077.57063	3.0229	0.0016317	-1.0038	-0.00054184	2.0191	0.0010899	539.7918111892776	70.289	0.53925	71.643	71.366	71.906	1.3536					52	16	4	0	0	0	0.00023236	4	29471	29430;29471;29510;29549		140.63	48.142	1	31864000			3013	1691	1452	1463	3704;3705;3706;3707	3705					0.03494305894855643
DLFKDIQSL	9	Unmodified	_DLFKDIQSL_					0	0	0		ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7932006716728	2	539.792589	1077.57063	2.9318	0.0015825	-1.278	-0.00068986	1.6538	0.00089269	539.7917105435037	69.802	0.47625	71.639	71.372	71.849	1.8378					52	14	5	0	0	0	0.0051619	3	29274	29228;29274;29313		121.35	32.392	1	28457000			3014	1691	1452	1463	3708;3709;3710	3709					0.03494305894855643
DLFLQRYQFMR	11	Unmodified	_DLFLQRYQFMR_					0	0	0		nc|ENSG00000171004|Q96MM7-2|HS6ST2;nc|ENSG00000171004|Q96MM7-3|HS6ST2;nc|ENSG00000171004|Q96MM7|HS6ST2;ENSG00000171004|ENST00000370833|HS6ST2	nc|ENSG00000171004|Q96MM7-2|HS6ST2	nc|ENSG00000171004|Q96MM7-2|HS6ST2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	759.6417114138603	2	758.890103	1515.76565	0.24269	0.00018418	-0.65907	-0.00050016	-0.41638	-0.00031598	758.8890885694836	14.09	0.12459	14.203	14.105	14.229	0.11295					6	3	2	0	0	0	0.14606	1	5833	5833		0.35063	0	1	185740			3015	4172	1453	1464	3711	3711					0.02840153428155645
DLFQQRYQYKR	11	Unmodified	_DLFQQRYQYKR_					0	0	0		nc|ENSG00000136720|O60243-2|HS6ST1;ENSG00000136720|ENST00000259241|HS6ST1	nc|ENSG00000136720|O60243-2|HS6ST1	nc|ENSG00000136720|O60243-2|HS6ST1	MSMS	GG20161007_CRH_Patient100_W632_01	3	772.9002563357353	2	772.902057	1543.78956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.26	1	102.43	101.93	102.93	0.17032								0	0	0	0.63775	1	43038	43038		2.7352	0	1				3016	7879	1454	1465	3712	3712					0.039417101862227355
DLFRDIQSL	9	Unmodified	_DLFRDIQSL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;EHD4|p.A361Rfs*7|1|0.08|ENSG00000103966|chr15:41909707-41909708|-/G|frameshift_variant;ENSG00000013016|ENST00000322054|EHD3	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7991821169853	2	553.795663	1105.57677	2.527	0.0013995	2.3543	0.0013038	4.8813	0.0027032	553.7971990635648	69.888	0.37592	71.241	70.99	71.366	1.3536					34	11	4	0	0	0	0.0080484	2	29333	29282;29333		110.55	37.585	1	8021400			3017	1445	1455	1466	3713;3714	3714					0.028208241263882883
DLFRDIQSL	9	Unmodified	_DLFRDIQSL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;EHD4|p.A361Rfs*7|1|0.08|ENSG00000103966|chr15:41909707-41909708|-/G|frameshift_variant;ENSG00000013016|ENST00000322054|EHD3	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7973510622978	2	553.795663	1105.57677	1.867	0.001034	1.7732	0.00098201	3.6403	0.002016	553.7968648039358	69.33	0.34649	71.183	71.009	71.356	1.853					31	10	4	0	0	0	0.0061207	2	29106	29059;29106		117.76	28.36	1	6832600			3018	1445	1455	1466	3715;3716	3716					0.028208241263882883
DLFYLHAPD	9	Unmodified	_DLFYLHAPD_					0	0	0		ENST00000492217.1_1_1:19634582-19638531:-|nuORF;nc|ENSG00000211454|Q8NHP1-3|AKR7L;nc|ENSG00000211454|Q8NHP1|AKR7L;ENSG00000053371|ENST00000235835|AKR7A2	ENST00000492217.1_1_1:19634582-19638531:-|nuORF	ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7656127810478	2	545.763832	1089.51311	3.2012	0.0017471	0.95426	0.0005208	4.1555	0.0022679	545.7643273486177	74.337	0.42357	75.655	75.405	75.829	1.318					36	13	4	0	0	0	0.46905	1	31219	31219		16.942	0	1	6094200			3019	708	1456	1467	3717	3717					-0.02806536310708907
DLGEEHFK	8	Unmodified	_DLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7329284548759	2	487.732532	973.45051	0.57661	0.00028123	0.26403	0.00012878	0.84064	0.00041001	487.73264294672373	15.792	0.59079	15.792	15.528	16.119	0					58	18	5	0	0	0	0.155	5	6545	6498;6545;6584;6623;6673		85.642	51.539	1	20075000		+	3020	341	1457	1468	3718;3719;3720;3721;3722	3719					-0.03727682378894315
DLGEEHFK	8	Unmodified	_DLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7328979372978	2	487.732532	973.45051	1.0837	0.00052856	-0.15088	-7.3589E-05	0.93284	0.00045497	487.7322924693241	15.753	0.52751	15.883	15.65	16.178	0.13022					39	16	3	0	0	0	0.25552	3	6543	6495;6543;6597		75.761	41.658	1	3473300		+	3021	341	1457	1468	3723;3724;3725	3724					-0.03727682378894315
DLGEEHFK	8	Unmodified	_DLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	325.4905578494072	3	325.49078	973.45051	-0.2831	-9.2145E-05	-0.13681	-4.453E-05	-0.4199	-0.00013667	325.49063995818665	15.787	0.46543	15.917	15.682	16.147	0.13022					25	14	2	0	0	0	0.67986	1	6557	6557		26.268	9.1552	1	1297400		+	3022	341	1457	1468	3726	3726					-0.03727682378894315
DLGEEHFK	8	Unmodified	_DLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7324096560478	2	487.732532	973.45051	0.24791	0.00012091	0.092458	4.5095E-05	0.34037	0.00016601	487.7325722106867	15.205	0.52853	15.974	15.738	16.267	0.76937					33	16	3	0	0	0	0.49909	3	6335	6285;6335;6404		47.749	19.262	1	1989100		+	3023	341	1457	1468	3727;3728;3729	3728					-0.03727682378894315
DLGEEHFK	8	Unmodified	_DLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7326537966728	2	487.732532	973.45051	0.22772	0.00011107	0.41385	0.00020185	0.64157	0.00031292	487.73262102773003	15.109	0.54235	16.006	15.773	16.315	0.89664					31	17	3	0	0	0	0.71199	2	6250	6250;6303		29.082	13.234	1	1425700		+	3024	341	1457	1468	3730;3731	3730					-0.03727682378894315
DLGFQFTF	8	Unmodified	_DLGFQFTF_					0	0	0			REV__ENSG00000188215|ENST00000324344|DCUN1D3	REV__ENSG00000188215|ENST00000324344|DCUN1D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	325.4907104372978	3	325.492121	973.454533	-3.1622	-0.0010293	-1.1118	-0.00036189	-4.274	-0.0013912	325.49176393298416	15.779	0.52664	15.779	15.56	16.087	0					50	16	4	0	0	0	0.73597	1	6585	6585		21.537	3.1639	1	10332000	+		3025	11563	1458	1469	3732	3732					-0.03325592885187234
DLGKARVKD	9	Unmodified	_DLGKARVKD_					0	0	0			REV__ENSG00000008086|ENST00000623535|CDKL5	REV__ENSG00000008086|ENST00000623535|CDKL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2918884158134	2	501.290548	1000.56654	3.8976	0.0019538	-0.43759	-0.00021936	3.46	0.0017345	501.2902765145791	81.951	0.46446	83.163	82.915	83.38	1.2125					34	14	3	0	0	0	0.80152	1	34379	34379		3.2813	0.39209	1	2488400	+		3026	8520	1459	1470	3733	3733					0.06628261191792717
DLGKARVKD	9	Unmodified	_DLGKARVKD_					0	0	0			REV__ENSG00000008086|ENST00000623535|CDKL5	REV__ENSG00000008086|ENST00000623535|CDKL5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	501.290548	1000.56654	3.7104	0.00186	0.50661	0.00025396	4.217	0.002114	501.29064435669017	81.683	0.49525	83.379	83.043	83.539	1.6959	0.25504	0.00039604	NaN	3.2813	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1676100	+		3027	8520	1459	1470							0.06628261191792717
DLGNIYRMTVE	11	Unmodified	_DLGNIYRMTVE_					0	0	0			REV__ENSG00000175093|ENST00000310546|SPSB4	REV__ENSG00000175093|ENST00000310546|SPSB4	MSMS	GG20161007_CRH_Patient100_A02_01	1	655.8232910037041	2	655.824095	1309.63364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.889	1	19.889	19.389	20.389	0								0	0	0	0.63775	1	8266	8266		4.897	1.3005	1		+		3028	11143	1460	1471	3734	3734					-0.008794963794116484
DLGQYYINIK	10	Unmodified	_DLGQYYINIK_					0	0	0			REV__ENSG00000197056|ENST00000359858|ZMYM1	REV__ENSG00000197056|ENST00000359858|ZMYM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.8265258669853	2	613.824421	1225.63429	1.9672	0.0012075	1.1211	0.00068815	3.0883	0.0018957	613.8251954812573	39.065	0.28128	39.065	38.89	39.171	0					14	8	2	0	0	0	0.44465	1	16357	16357		30.637	5.6456	1	1405800	+		3029	11655	1461	1472	3735	3735					0.030496663319127038
DLHLEEVS	8	Unmodified	_DLHLEEVS_					0	0	0		ENST00000582618.1_1_18:21948255-21957497:-|nuORF	ENST00000582618.1_1_18:21948255-21957497:-|nuORF	ENST00000582618.1_1_18:21948255-21957497:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	471.3071472048759	2	471.232364	940.450176	2.736	0.0012893	-3.571	-0.0016828	-0.83505	-0.0003935	471.2316352364335	83.223	0.27438	83.223	83.076	83.35	0					21	8	3	0	0	0	2.3239	1	34701	34701		5.2307	0.90143	1	1799100			3030	7440	1462	1473	3736	3736					-0.022431020987482952
DLHNMVNV	8	Unmodified	_DLHNMVNV_					0	0	0			REV__ENST00000414661.1_1_2:13143779-13143995:-|nuORF	REV__ENST00000414661.1_1_2:13143779-13143995:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2318603396416	2	471.229102	940.443651	3.6048	0.0016987	0.54003	0.00025448	4.1449	0.0019532	471.2295164507913	81.3	0.33827	82.996	82.798	83.136	1.6959					27	10	3	0	0	0	0.87701	1	34128	34128		9.3474	0.75416	1	2186000	+		3031	12932	1463	1474	3737	3737					-0.02895318531113844
DLINVFIKEI	10	Unmodified	_DLINVFIKEI_					0	0	0		tr|A0A7D7A2N6|A0A7D7A2N6_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20760PE=4SV=1	tr|A0A7D7A2N6|A0A7D7A2N6_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20760PE=4SV=1	tr|A0A7D7A2N6|A0A7D7A2N6_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20760PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.3527099490166	2	602.352814	1202.69108	1.9353	0.0011657	-0.40898	-0.00024635	1.5263	0.00091939	602.3518977031476	83.483	0.2516	84.671	84.516	84.767	1.1879					13	7	2	0	0	0	0.55653	1	35057	35057		24.991	3.454	1	697810			3032	17261	1464	1475	3738	3738					0.09783713888464263
DLIRLQPLTQL	11	Unmodified	_DLIRLQPLTQL_					0	0	0			REV__nc|ENSG00000133739|Q9C099-2|LRRCC1	REV__nc|ENSG00000133739|Q9C099-2|LRRCC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2016479372978	4	328.20141	1308.77654	-0.99864	-0.00032776	2.7054	0.00088791	1.7067	0.00056016	328.20158769933795	36.012	0.47667	37.289	37.064	37.54	1.2762					73	28	3	0	0	0	1.0032	1	15174	15174		3.5927	0.74939	1	7618900	+		3033	9883	1465	1476	3739	3739					0.13449879074119053
DLIRLQPLTQL	11	Unmodified	_DLIRLQPLTQL_					0	0	0			REV__nc|ENSG00000133739|Q9C099-2|LRRCC1	REV__nc|ENSG00000133739|Q9C099-2|LRRCC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2015869021416	4	328.20141	1308.77654	0.20141	6.6102E-05	1.4164	0.00046486	1.6178	0.00053096	328.2013493106914	35.554	0.37152	37.372	37.159	37.531	1.8176					63	25	3	0	0	0	1.0032	1	14942	14942		3.5927	0.96144	1	10843000	+		3034	9883	1465	1476	3740	3740					0.13449879074119053
DLKINTLPIV	10	Unmodified	_DLKINTLPIV_					0	0	0		ENST00000605506.1_1_1:84542931-84543057:-|nuORF	ENST00000605506.1_1_1:84542931-84543057:-|nuORF	ENST00000605506.1_1_1:84542931-84543057:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3489257693291	2	563.347532	1124.68051	3.194	0.0017993	0.91251	0.00051406	4.1065	0.0023134	563.3475914452375	60.155	0.28366	62.12	61.977	62.26	1.9653					20	8	3	0	0	0	0.44465	1	25277	25277		30.637	0	1	3692200			3035	7556	1466	1477	3741	3741					0.12315731234048144
DLKKKKKKKAL	11	Unmodified	_DLKKKKKKKAL_					0	0	0			REV__ENST00000377291.2_1_5:175110088-175110163:+|nuORF	REV__ENST00000377291.2_1_5:175110088-175110163:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4633056521416	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.99	1	108.99	108.49	109.49	0								0	0	0	0.63775	1	47072	47072		1.1933	0	1		+		3036	12728	1467	1478	3742	3742					0.2571131451286419
DLKKRMLIAPA	11	Unmodified	_DLKKRMLIAPA_					0	0	0		ENST00000369983.3_1_10:104142211-104142316:+|nuORF	ENST00000369983.3_1_10:104142211-104142316:+|nuORF	ENST00000369983.3_1_10:104142211-104142316:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3834716677666	2	628.381383	1254.74821	2.3591	0.0014824	1.9224	0.001208	4.2814	0.0026904	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	1.0362	1	32715	32715		1.3295	0.13619	1	7119900			3037	6103	1468	1479	3743	3743					0.13102857893227338
DLKRWNKL	8	Unmodified	_DLKRWNKL_					0	0	0		JARID2|p.K676R|1|0.08|ENSG00000008083|chr6:15500988-15500988|A/G|missense_variant	JARID2|p.K676R|1|0.08|ENSG00000008083|chr6:15500988-15500988|A/G|missense_variant	JARID2|p.K676R|1|0.08|ENSG00000008083|chr6:15500988-15500988|A/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1619750857353	2	536.816733	1071.61891	1.8645	0.0010009	-2.0342	-0.001092	-0.16973	-9.1113E-05	536.8155851533534	67.093	0.24767	67.415	67.31	67.558	0.32269					14	8	2	0	0	0	2.3239	1	28090	28090		7.9102	0	1	777930			3038	7662	1469	1480	3744	3744					0.08596844325415987
DLLAVLRGL	9	Unmodified	_DLLAVLRGL_					0	0	0		nc|ENSG00000020129|Q9UBB6-2|NCDN;ENSG00000020129|ENST00000373243|NCDN	nc|ENSG00000020129|Q9UBB6-2|NCDN	nc|ENSG00000020129|Q9UBB6-2|NCDN	MSMS	GG20161007_CRH_Patient100_W632_01	3	485.3095580935478	2	485.30821	968.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.217	1	56.627	56.127	57.127	1.4099								0	0	0	0.317	1	23124	23124		16.942	2.104	1				3039	611	1470	1481	3745	3745					0.11630923719621933
DLLEDYSTGEF	11	Unmodified	_DLLEDYSTGEF_					0	0	0			REV__tr|A0A553SN90|A0A553SN90_NIACIThiol-disulfideoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24015PE=4SV=1	REV__tr|A0A553SN90|A0A553SN90_NIACIThiol-disulfideoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.7879516482353	2	644.782615	1287.55068	1.4691	0.00094724	1.7178	0.0011076	3.1869	0.0020549	644.7847162377794	84.476	0.4094	85.635	85.464	85.874	1.159					28	12	4	0	0	0	0.84637	1	35431	35431		13.042	2.9685	1	3343200	+		3040	15047	1471	1482	3746	3746					-0.08159534626406639
DLLKLNVAPLA	11	Unmodified	_DLLKLNVAPLA_					0	0	0		ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENSG00000173272|ENST00000309451|MZT2A;ENSG00000152082|ENST00000281871|MZT2B;ENST00000485869.1_1_2:130940017-130940434:+|nuORF	ENST00000480182.1_1_2:130940128-130948196:+|nuORF	ENST00000480182.1_1_2:130940128-130948196:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.8607665896416	2	583.860806	1165.70706	2.174	0.0012693	-2.5881	-0.0015111	-0.41417	-0.00024182	583.8592938104463	82.919	0.55547	83.189	83.029	83.585	0.27029					38	17	3	0	0	0	1.0366	1	34641	34641		1.1933	0	1	1959700			3041	3311	1472	1483	3747	3747					0.1308342012534922
DLLKQKMRKWI	11	Unmodified	_DLLKQKMRKWI_					0	0	0			REV__nc|ENSG00000102001|O60840-5|CACNA1F	REV__nc|ENSG00000102001|O60840-5|CACNA1F	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.3123657107353	3	486.958635	1457.85407	4.6707	0.0022744	-0.70426	-0.00034294	3.9664	0.0019315	486.95852417094443	88.875	0.48091	90.321	90.113	90.594	1.4467					28	14	3	0	0	0	0.14606	1	37558	37558		1.3296	0	1	469450	+		3042	9056	1473	1484	3748	3748					0.1434619373865189
DLLPKEMKSA	10	Unmodified	_DLLPKEMKSA_					0	0	0		tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1131.614428699017	1	1131.60782	1130.60055	3.1106	0.00352	-1.1356	-0.0012851	1.975	0.0022349	1131.606718800158	101.01	0.23458	101.22	101.12	101.36	0.20526					14	7	3	0	0	0	0.82659	1	42451	42451		9.3831	0	1	72954000			3043	17204	1474	1485	3749	3749					0.04046921568556172
DLLPWFLWK	9	Unmodified	_DLLPWFLWK_					0	0	0			REV__nc|ENSG00000254788|Q9UBR5-5|CKLF	REV__nc|ENSG00000254788|Q9UBR5-5|CKLF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1795532107353	2	609.33951	1216.66447	1.8073	0.0011013	-1.6337	-0.00099546	0.17366	0.00010582	609.3381995838125	64.391	0.44951	64.72	64.529	64.979	0.32899					32	13	3	0	0	0	0.85019	1	26898	26898		0.52476	0	1	2474400	+		3044	11871	1475	1486	3750	3750					0.06480069787767206
DLLRRRRPWPW	11	Unmodified	_DLLRRRRPWPW_					0	0	0			REV__ENSG00000182871|ENST00000651438|COL18A1	REV__ENSG00000182871|ENST00000651438|COL18A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	775.9456054568291	2	775.944393	1549.87423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.6	1	101.79	101.29	102.29	0.19076								0	0	0	0.63775	1	42716	42716		1.3295	0.13619	1		+		3045	11366	1476	1487	3751	3751					0.12129125513502004
DLLVEHLKQL	10	Unmodified	_DLLVEHLKQL_					0	0	0		tr|A0A7D7A2U4|A0A7D7A2U4_9CLOTUridinekinaseOS=ClostridiumintestinaleOX=36845GN=udkPE=3SV=1	tr|A0A7D7A2U4|A0A7D7A2U4_9CLOTUridinekinaseOS=ClostridiumintestinaleOX=36845GN=udkPE=3SV=1	tr|A0A7D7A2U4|A0A7D7A2U4_9CLOTUridinekinaseOS=ClostridiumintestinaleOX=36845GN=udkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3589355349541	2	604.355888	1206.69722	2.8873	0.001745	0.90535	0.00054716	3.7927	0.0022921	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	0.85124	1	36390	36390		6.7232	0.51738	1	89814000			3046	17263	1477	1488	3752	3752					0.10214232119983535
DLMAPVSAKKR	11	Unmodified	_DLMAPVSAKKR_					0	0	0		TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant	TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant	TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1215.685473620892	1	1215.6878	1214.68053	2.7502	0.0033433	-2.6231	-0.0031888	0.1271	0.00015452	1215.683158581831	103.59	0.098259	103.76	103.71	103.81	0.16445					10	4	3	0	0	0	1.0084	1	43708	43708		3.2813	0.28607	1	23273000			3047	17348	1478	1489	3753	3753					0.08177407962375582
DLMKGGCM	8	Unmodified	_DLMKGGCM_					0	0	0			REV__ENST00000473113.1_1_2:25817997-25830150:-|nuORF	REV__ENST00000473113.1_1_2:25817997-25830150:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	854.3137084841728	1	854.356892	853.349616	2.7838	0.0023784	0.2322	0.00019838	3.016	0.0025768	854.356605118767	98.723	0.22436	98.803	98.679	98.904	0.080376					21	7	4	0	0	0	0.89008	1	41284	41284		2.5775	0	1	260850000	+		3048	10043	1479	1490	3754	3754					-0.08292496949252381
DLPEHAVLK	9	Unmodified	_DLPEHAVLK_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2891418337822	2	511.287474	1020.5604	1.2376	0.00063275	0.94144	0.00048135	2.179	0.0011141	511.2876938747652	20.775	0.1512	21.901	21.775	21.926	1.1254					7	4	2	0	0	0	0.25667	1	8662	8662		27.629	5.8822	1	510780			3049	3348	1480	1491	3755	3755					0.05093742960286818
DLPEHAVLK	9	Unmodified	_DLPEHAVLK_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2881347537041	2	511.287474	1020.5604	0.7793	0.00039844	1.0945	0.0005596	1.8738	0.00095805	511.2881613035879	20.282	0.18088	21.857	21.73	21.911	1.5748					9	5	2	0	0	0	0.35391	1	8437	8437		22.736	5.794	1	355130			3050	3348	1480	1491	3756	3756					0.05093742960286818
DLPIPDCLLI	10	Unmodified	_DLPIPDCLLI_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.3080932497978	2	556.307018	1110.59948	1.3929	0.00077488	0.89576	0.00049832	2.2887	0.0012732	556.306950079171	57.642	0.30779	57.642	57.509	57.817	0					12	9	2	0	0	0	0.62746	1	24062	24062		21.747	1.293	1	833590	+		3051	8693	1481	1492	3757	3757					0.048607071996229934
DLPTSVRS	8	Unmodified	_DLPTSVRS_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7343322634697	2	437.735074	873.455596	0.025817	1.1301E-05	-1.3375	-0.00058546	-1.3117	-0.00057416	437.7341631267179	12.425	0.8654	12.425	12.003	12.869	0					43	27	3	0	0	0	0.65897	1	5136	5136		34.402	2.0962	1	1276100			3052	4875	1482	1493	3758	3758					0.013806214837131847
DLPTSVRS	8	Unmodified	_DLPTSVRS_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	437.735074	873.455596	0.6113	0.00026759	0.47724	0.00020891	1.0885	0.00047649	437.73532145693287	12.448	0.46002	12.538	12.433	12.893	0.089381	-0.012541	-9.7078E-06	NaN	34.402	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	554310			3053	4875	1482	1493							0.013806214837131847
DLPTSVRS	8	Unmodified	_DLPTSVRS_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2;nc|ENSG00000188738|Q5CZC0-2|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	437.735074	873.455596	-0.040849	-1.7881E-05	1.4062	0.00061556	1.3654	0.00059768	437.73553272271783	11.994	0.25007	12.688	12.602	12.852	0.69396	0.13811	0.00080361	NaN	34.402	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295860			3054	4875	1482	1493							0.013806214837131847
DLQKTFFSS	9	Unmodified	_DLQKTFFSS_					0	0	0		AKAP11|p.V710Sfs*3|1|0.03|ENSG00000023516|chr13:42300873-42300892|TGTGACCTTTACAACAAAGG/-|frameshift_variant;AKAP11|p.D1747Mfs*9|1|0.11|ENSG00000023516|chr13:42308573-42308573|A/-|frameshift_variant;ENSG00000023516|ENST00000025301|AKAP11	AKAP11|p.V710Sfs*3|1|0.03|ENSG00000023516|chr13:42300873-42300892|TGTGACCTTTACAACAAAGG/-|frameshift_variant	AKAP11|p.V710Sfs*3|1|0.03|ENSG00000023516|chr13:42300873-42300892|TGTGACCTTTACAACAAAGG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1630737185478	2	536.769114	1071.52368	1.7297	0.00092842	0.057063	3.0629E-05	1.7867	0.00095905	536.7691461871415	77.053	0.31192	77.053	76.877	77.189	0					17	9	2	0	0	0	0.11923	1	32006	32006		0.40072	0	1	702990			3055	32	1483	1494	3759	3759					-0.00922553656278069
DLRILLQG	8	Unmodified	_DLRILLQG_					0	0	0			REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2897216677666	2	464.284734	926.554916	2.0562	0.00095468	0.44663	0.00020736	2.5029	0.001162	464.28499359755534	41.839	0.44562	43.732	43.413	43.859	1.8927					27	13	3	0	0	0	0.88587	1	17461	17461		5.2307	0	1	3036200	+		3056	10493	1484	1495	3760	3760					0.08870064168490899
DLRRRLRRRRR	11	Unmodified	_DLRRRLRRRRR_					0	0	0			REV__ENSG00000135144|ENST00000548759|DTX1	REV__ENSG00000135144|ENST00000548759|DTX1	MSMS	GG20161007_CRH_Patient100_W632_02	4	805.3045532107353	2	805.014538	1608.01452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.005	1	98.261	97.761	98.761	0.25636								0	0	0	0.63775	1	41233	41233		0.30703	0	1		+		3057	9931	1485	1496	3761	3761					0.23483722290416154
DLRRRQRR	8	Unmodified	_DLRRRQRR_					0	0	0			REV__ENST00000255977.6_2_7:140178977-140179166:-|nuORF	REV__ENST00000255977.6_2_7:140178977-140179166:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	578.3527709841728	2	578.350129	1154.6857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.36	1	104.41	103.91	104.91	0.056801								0	0	0	1.0178	1	43980	43980		2.3027	0.4585	1		+		3058	12162	1486	1497	3762	3762					0.11454892659889993
DLRRRQRRQRR	11	Unmodified	_DLRRRQRRQRR_					0	0	0			REV__ENST00000255977.6_2_7:140178977-140179166:-|nuORF	REV__ENST00000255977.6_2_7:140178977-140179166:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	399.4927245974541	4	399.743902	1594.9465	1.3957	0.00055791	-2.3766	-0.00095002	-0.9809	-0.00039211	399.74282788171706	33.345	0.93183	33.642	33.307	34.239	0.29701					39	30	2	0	0	0	0.14606	1	13955	13955		0.094841	0.011491	1	759570	+		3059	12162	1487	1498	3763	3763					0.17282852639777957
DLSAQWKQ	8	Unmodified	_DLSAQWKQ_					0	0	0		ENSG00000128253|ENST00000652607|RFPL2	ENSG00000128253|ENST00000652607|RFPL2	ENSG00000128253|ENST00000652607|RFPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2482177615166	2	488.248349	974.482145	1.0846	0.00052955	1.3758	0.00067174	2.4604	0.0012013	488.2489893857133	38.357	0.34504	40.193	39.959	40.304	1.8366					16	10	2	0	0	0	0.87106	1	16087	16087		14.582	3.7578	1	2231000			3060	2360	1488	1499	3764	3764					-0.006116896249523052
DLSEWEEDEED	11	Unmodified	_DLSEWEEDEED_					0	0	0			REV__FAM167B|p.G21W|1|0.32|ENSG00000183615|chr1:32247482-32247482|G/T|missense_variant	REV__FAM167B|p.G21W|1|0.32|ENSG00000183615|chr1:32247482-32247482|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	698.2579833865166	2	698.257159	1394.49976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.941	1	28.688	28.188	29.188	1.747								0	0	0	0.63775	1	11273	11273		1.3295	0.92882	1		+		3061	14158	1489	1500	3765	3765					-0.18170528461905633
DLSFDIYEGET	11	Unmodified	_DLSFDIYEGET_					0	0	0		tr|A0A553STL9|A0A553STL9_NIACINickelimportsystemATP-bindingproteinNikEOS=NialliacirculansOX=1397GN=CEQ21_05380PE=3SV=1	tr|A0A553STL9|A0A553STL9_NIACINickelimportsystemATP-bindingproteinNikEOS=NialliacirculansOX=1397GN=CEQ21_05380PE=3SV=1	tr|A0A553STL9|A0A553STL9_NIACINickelimportsystemATP-bindingproteinNikEOS=NialliacirculansOX=1397GN=CEQ21_05380PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.7850829958916	2	644.782615	1287.55068	1.952	0.0012586	1.6431	0.0010594	3.5951	0.002318	644.7838732956088	84.099	0.31238	85.737	85.559	85.871	1.6379					23	9	4	0	0	0	0.37492	1	35266	35266		27.629	1.3607	1	3166600			3062	16659	1490	1501	3766	3766					-0.08159534626429377
DLSPDITML	9	Unmodified	_DLSPDITML_					0	0	0			REV__ENST00000569504.5_1_16:67861593-67861893:+|nuORF	REV__ENST00000569504.5_1_16:67861593-67861893:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7523376345634	2	502.752075	1003.4896	1.9745	0.00099269	-1.8402	-0.00092518	0.13429	6.7514E-05	502.7511824487162	76.73	0.7384	78.498	78.095	78.834	1.7672					41	22	2	0	0	0	0.19075	1	32221	32221		34.102	7.2188	1	3615400	+		3063	9087	1491	1502	3767	3767					-0.012007181395688349
DLTDYLMK	8	Unmodified	_DLTDYLMK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ACTBL2|p.R184S|1|0.09|ENSG00000169067|chr5:57482156-57482156|T/G|missense_variant	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7465698122978	2	499.746793	997.479033	1.0535	0.00052649	-1.2301	-0.00061474	-0.17659	-8.8249E-05	499.74584532765823	52.06	0.26888	53.456	53.318	53.587	1.3966					12	8	2	0	0	0	0.64178	1	21797	21797		36.127	3.8215	1	1274300			3064	937	1492	1503	3768	3768					-0.0198070079397894
DLTDYLMK	8	Unmodified	_DLTDYLMK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF;ENST00000436287.1_1_1:224051789-224052101:-|nuORF;ACTBL2|p.R184S|1|0.09|ENSG00000169067|chr5:57482156-57482156|T/G|missense_variant	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7451965212822	2	499.746793	997.479033	0.3706	0.0001852	-2.5983	-0.0012985	-2.2277	-0.0011133	499.74504527508464	51.537	0.28238	53.513	53.367	53.65	1.9753					13	8	2	0	0	0	0.69649	1	21581	21581		30.637	3.7529	1	1447700			3065	937	1492	1503	3769	3769					-0.0198070079397894
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	532.2949706912041	2	532.292756	1062.57096	1.9783	0.001053	1.7621	0.00093797	3.7404	0.001991	532.2940121899543	64.029	0.40565	64.029	63.832	64.238	0					38	12	4	0	0	0	0.20671	1	26688	26688		32.305	10.769	1	4878300	+		3066	11415	1493	1504	3770	3770					0.04217725614716983
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	532.2932617068291	2	532.292756	1062.57096	2.0083	0.001069	0.082919	4.4137E-05	2.0912	0.0011131	532.2930388913024	63.637	0.58104	63.966	63.756	64.337	0.32899					43	18	3	0	0	0	0.42305	1	26648	26648		19.257	1.1106	1	5919800	+		3067	11415	1493	1504	3771	3771					0.04217725614716983
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2938110232353	2	532.292756	1062.57096	2.9704	0.0015811	-0.87383	-0.00046513	2.0966	0.001116	532.2930146239205	62.515	0.63343	63.928	63.711	64.344	1.4134					73	20	5	0	0	0	0.30098	2	26209	26209;26262		25.399	6.1423	1	17234000	+		3068	11415	1493	1504	3772;3773	3772					0.04217725614716983
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	532.292756	1062.57096	1.9783	0.001053	1.7621	0.00093797	3.7404	0.001991	532.2940121899543	64.029	0.40565	64.029	63.832	64.238	0	0.060284	0.0018414	NaN	32.305	38	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4878300	+		3069	11415	1493	1504							0.04217725614716983
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	532.292756	1062.57096	2.0083	0.001069	0.082919	4.4137E-05	2.0912	0.0011131	532.2930388913024	63.637	0.58104	63.966	63.756	64.337	0.32899	-0.0027135	5.3734E-05	NaN	32.305	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5919800	+		3070	11415	1493	1504							0.04217725614716983
DLTRDVFVV	9	Unmodified	_DLTRDVFVV_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	532.292756	1062.57096	2.9704	0.0015811	-0.87383	-0.00046513	2.0966	0.001116	532.2930146239205	62.515	0.63343	63.928	63.711	64.344	1.4134	-0.040358	-0.00096481	NaN	32.305	73	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17234000	+		3071	11415	1493	1504							0.04217725614716983
DLVLCCHSL	9	Unmodified	_DLVLCCHSL_					0	0	0		ENST00000526903.1_1_11:71671906-71693970:+|nuORF;ENST00000361756.7_1_11:71671906-71698058:+|nuORF	ENST00000526903.1_1_11:71671906-71693970:+|nuORF	ENST00000526903.1_1_11:71671906-71693970:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3065978884697	2	501.740988	1001.46742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.862	1	68.251	67.751	68.751	1.3888								0	0	0	0.3792	1	28048	28048		10.824	0.64053	1				3072	6041	1494	1505	3774	3774					-0.03325221088948638
DLVLRRTHLA	10	Unmodified	_DLVLRRTHLA_					0	0	0		ENSG00000197498|ENST00000441448|RPF2	ENSG00000197498|ENST00000441448|RPF2	ENSG00000197498|ENST00000441448|RPF2	MSMS	GG20161007_CRH_Patient100_A02_02	2	597.3633911013603	2	597.359296	1192.70404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.25	1	118.29	117.79	118.79	0.041039								0	0	0	0.66176	1	50797	50797		1.4819	0.8804	1				3073	5011	1495	1506	3775	3775					0.11539589791232174
DLVRCCHK	8	Unmodified	_DLVRCCHK_					0	0	0		ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18;ENSG00000114648|ENST00000232766|KLHL18	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2409545779228	2	487.238947	972.46334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.819	1	37.819	37.319	38.319	0								0	0	0	1.0178	1	15853	15853		5.7604	0.52976	1				3074	1874	1496	1507	3776	3776					-0.02399265792018923
DLVYEDEV	8	Unmodified	_DLVYEDEV_					0	0	0		nc|ENSG00000108395|O94972-2|TRIM37;nc|ENSG00000108395|O94972-3|TRIM37;ENSG00000108395|ENST00000262294|TRIM37	nc|ENSG00000108395|O94972-2|TRIM37	nc|ENSG00000108395|O94972-2|TRIM37	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2269470095634	2	491.224205	980.433857	3.292	0.0016171	2.1682	0.0010651	5.4602	0.0026822	491.2249521943517	60.675	0.28332	62.094	61.933	62.217	1.4196					21	8	4	0	0	0	0.87935	1	25439	25439		9.3474	3.587	1	1545400			3075	1633	1497	1508	3777	3777					-0.05714228055512649
DLWLDEPPPP	10	Unmodified	_DLWLDEPPPP_					0	0	0		tr|A0A553SIH1|A0A553SIH1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14760PE=3SV=1	tr|A0A553SIH1|A0A553SIH1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14760PE=3SV=1	tr|A0A553SIH1|A0A553SIH1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14760PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	589.7945434451103	2	589.790047	1177.56554	1.8079	0.0010663	3.8442	0.0022673	5.6521	0.0033336	590.2929000302624	45.042	0.18764	47.002	46.896	47.083	1.9596					11	5	3	0	0	0	0.12539	1	18900	18900		1.8442	0	1	442350			3076	16199	1498	1509	3778	3778					-0.01613997967774594
DLWQLAVSI	9	Unmodified	_DLWQLAVSI_					0	0	0			REV__ENSG00000188674|ENST00000341287|C2orf80	REV__ENSG00000188674|ENST00000341287|C2orf80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2953369021416	2	522.78985	1043.56515	1.9396	0.001014	2.1087	0.0011024	4.0483	0.0021164	522.7894131129441	72.663	0.44444	72.663	72.396	72.84	0					27	13	3	0	0	0	0.46905	1	30200	30200		16.942	3.4344	1	1610700	+		3077	11578	1499	1510	3779	3779					0.04510627103036313
DLYEDNIPM	9	Unmodified	_DLYEDNIPM_					0	0	0		tr|A0A7D7A3U4|A0A7D7A3U4_9CLOTFMNdependentNADH:quinoneoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=azoRPE=3SV=1	tr|A0A7D7A3U4|A0A7D7A3U4_9CLOTFMNdependentNADH:quinoneoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=azoRPE=3SV=1	tr|A0A7D7A3U4|A0A7D7A3U4_9CLOTFMNdependentNADH:quinoneoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=azoRPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1018554568291	3	370.498835	1108.47468	0.98703	0.00036569	1.3789	0.00051089	2.366	0.00087659	370.49936017693256	69.073	0.27359	70.438	70.284	70.558	1.3657					13	8	2	0	0	0	0.11938	1	28991	28991		0	0	1	801310			3078	17279	1500	1511	3780	3780					-0.07522210007550711
DLYFRSKLF	9	Unmodified	_DLYFRSKLF_					0	0	0			REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8261596560478	2	594.824224	1187.63389	1.8481	0.0010993	1.691	0.0010059	3.5391	0.0021051	594.8253400616213	66.841	0.52985	68.229	67.996	68.526	1.3888					29	16	2	0	0	0	0.22861	1	28022	28022		25.399	1.3787	1	1813100	+		3079	13428	1501	1512	3781	3781					0.04758291402731629
DLYFRSKLF	9	Unmodified	_DLYFRSKLF_					0	0	0			REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.8861877322197	3	396.885241	1187.63389	1.5111	0.00059974	0.53492	0.0002123	2.046	0.00081204	396.88543671169305	66.34	0.44199	68.229	68.025	68.467	1.8889					28	13	3	0	0	0	0.70577	1	27842	27842		7.1017	1.3183	1	2114800	+		3080	13428	1501	1512	3782	3782					0.04758291402731629
DMANQTQNEI	10	Unmodified	_DMANQTQNEI_					0	0	0			REV__nc|ENSG00000137812|Q8NG31-3|KNL1	REV__nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.2574951052666	2	582.253502	1162.49245	2.2033	0.0012829	2.9068	0.0016925	5.1101	0.0029754	582.255642454285	69.526	0.39522	70.892	70.701	71.096	1.3657					35	12	5	0	0	0	0.79268	1	29205	29205		13.042	0	1	8297900	+		3081	10030	1502	1513	3783	3783					-0.0822949475268615
DMCREAMEGLD	11	Unmodified	_DMCREAMEGLD_					0	0	0		tr|A0A7D6ZI08|A0A7D6ZI08_9CLOTPutativeaminohydrolaseSsnAOS=ClostridiumintestinaleOX=36845GN=ssnAPE=4SV=1	tr|A0A7D6ZI08|A0A7D6ZI08_9CLOTPutativeaminohydrolaseSsnAOS=ClostridiumintestinaleOX=36845GN=ssnAPE=4SV=1	tr|A0A7D6ZI08|A0A7D6ZI08_9CLOTPutativeaminohydrolaseSsnAOS=ClostridiumintestinaleOX=36845GN=ssnAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	635.2476684451103	2	635.249048	1268.48354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.962	1	44.883	44.383	45.383	1.9211								0	0	0	0.63775	1	18007	18007		4.5289	2.6846	1				3082	17092	1503	1514	3784	3784					-0.13995927705036593
DMDEEEEH	8	Unmodified	_DMDEEEEH_					0	0	0			REV__ENSG00000197892|ENST00000524189|KIF13B	REV__ENSG00000197892|ENST00000524189|KIF13B	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.1177856326103	3	345.118683	1032.33422	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.714	1	20.162	19.662	20.662	1.448								0	0	0	1.0178	1	7782	7782		0.45834	0	1		+		3083	11694	1504	1515	3785	3785					-0.1806541373177879
DMFSMKIRAFG	11	Unmodified	_DMFSMKIRAFG_					0	0	0		tr|A0A553SNJ1|A0A553SNJ1_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_24615PE=4SV=1	tr|A0A553SNJ1|A0A553SNJ1_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_24615PE=4SV=1	tr|A0A553SNJ1|A0A553SNJ1_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_24615PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8824645876884	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2436	1	5.98	5.48	6.48	0.73642								0	0	0	0.63775	1	2175	2175		0.094841	0	1				3084	16423	1505	1516	3786	3786					-0.012699271806923207
DMHNYCINYG	10	Unmodified	_DMHNYCINYG_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.4966918826103	3	410.495319	1228.46413	0.30543	0.00012538	0.62867	0.00025807	0.93411	0.00038345	410.4958471918997	32.702	0.31104	33.98	33.824	34.135	1.2782					33	10	5	0	0	0	0.89803	1	13750	13750		0.69767	0	1	2145900			3085	4465	1506	1517	3787	3787					-0.14096515933647424
DMPLGITTSNQ	11	Unmodified	_DMPLGITTSNQ_					0	0	0			REV__tr|A0A553SPI2|A0A553SPI2_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26400PE=4SV=1	REV__tr|A0A553SPI2|A0A553SPI2_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26400PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.7842895388603	2	588.781896	1175.54924	1.6159	0.00095141	2.5034	0.0014739	4.1193	0.0024253	588.7834922669158	34.207	0.48441	34.207	33.946	34.43	0					58	15	5	0	0	0	0.6971	1	14368	14368		18.373	0.22675	1	17809000	+		3086	15090	1507	1518	3788	3788					-0.031514471961600066
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7476989626884	2	480.746596	959.478639	1.5754	0.00075739	0.092817	4.4621E-05	1.6683	0.00080201	480.74704921299633	31.645	0.28346	31.645	31.441	31.725	0					12	8	2	0	0	0	0.84871	1	13256	13256		16.942	5.8278	1	541730	+		3087	10904	1508	1519	3789	3789					-0.0027207572318275197
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7483703494072	2	480.746596	959.478639	0.93798	0.00045093	1.0571	0.0005082	1.9951	0.00095913	480.7471343361212	30.015	0.33718	31.297	31.104	31.441	1.2825					24	10	3	0	0	0	0.84871	2	12580	12580;12629		16.942	4.4107	1	1443800	+		3088	10904	1508	1519	3790;3791	3790					-0.0027207572318275197
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7466308474541	2	480.746596	959.478639	0.69946	0.00033626	0.0025519	1.2268E-06	0.70201	0.00033749	480.74663731393355	29.632	0.3038	31.43	31.234	31.538	1.7987					16	9	2	0	0	0	0.84871	2	12393	12393;12443		16.942	4.4107	1	1220900	+		3089	10904	1508	1519	3792;3793	3792					-0.0027207572318275197
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	480.746596	959.478639	1.5754	0.00075739	0.092817	4.4621E-05	1.6683	0.00080201	480.74704921299633	31.645	0.28346	31.645	31.441	31.725	0	0.17864	-0.0003391	NaN	16.942	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541730	+		3090	10904	1508	1519							-0.0027207572318275197
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	480.746596	959.478639	1.9952	0.00095918	0.48151	0.00023148	2.4767	0.0011907	480.7471624209201	31.202	0.33011	31.493	31.33	31.66	0.29086	0.026672	3.4631E-05	NaN	16.942	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	767970	+		3091	10904	1508	1519							-0.0027207572318275197
DMPYLPKP	8	Unmodified	_DMPYLPKP_					0	0	0			REV__ENSG00000168301|ENST00000404589|KCTD6	REV__ENSG00000168301|ENST00000404589|KCTD6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.746596	959.478639	0.93798	0.00045093	1.0571	0.0005082	1.9951	0.00095913	480.7471343361212	30.015	0.33718	31.297	31.104	31.441	1.2825	-0.16938	0.00058806	NaN	16.942	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1443800	+		3092	10904	1508	1519							-0.0027207572318275197
DMQLREAEKF	10	Unmodified	_DMQLREAEKF_					0	0	0			REV__ENST00000600898.1_1_19:35769575-35770156:+|nuORF	REV__ENST00000600898.1_1_19:35769575-35770156:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.8768798708916	3	422.876417	1265.60742	0.77079	0.00032595	1.6008	0.00067695	2.3716	0.0010029	422.8770718775211	30.141	1.0865	31.423	31.193	32.279	1.2825					80	34	4	0	0	0	0.8974	1	12852	12852		1.7423	0.28716	1	11750000	+		3093	9187	1509	1520	3794	3794					-0.014757655509129108
DMSHKRLDDR	10	Unmodified	_DMSHKRLDDR_					0	0	0		ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	637.3088867068291	2	636.80931	1271.60407	0.59929	0.00038163	-4.3676	-0.0027814	-3.7684	-0.0023997	636.8061597425452	21.998	0.17815	22.221	22.142	22.32	0.223					9	5	2	0	0	0	0.8325	1	9149	9149		8.7454	1.1365	1	456850			3094	999	1510	1521	3795	3795					-0.0208701560488862
DMSHKRLDDR	10	Unmodified	_DMSHKRLDDR_					0	0	0		ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	ENSG00000080200|ENST00000389622|CRYBG3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	636.80931	1271.60407	1.2129	0.00077238	-3.6713	-0.0023379	-2.4584	-0.0015656	636.8072145891251	22.098	0.2473	22.098	21.935	22.183	0	-0.061475	0.00038373	NaN	8.7454	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388840			3095	999	1510	1521							-0.0208701560488862
DMTYAGFF	8	Unmodified	_DMTYAGFF_					0	0	0			REV__nc|ENSG00000021461|Q9HB55-4|CYP3A43	REV__nc|ENSG00000021461|Q9HB55-4|CYP3A43	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.2035705447197	2	476.199479	950.384405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.98	1	103.14	102.64	103.64	0.16445								0	0	0	1.0178	1	43382	43382		0.79363	0.10326	1		+		3096	8419	1511	1522	3796	3796					-0.09277214545306833
DMWGLAAPL	9	Unmodified	_DMWGLAAPL_					0	0	0			REV__nc|ENSG00000053108|Q6MZW2-3|FSTL4	REV__nc|ENSG00000053108|Q6MZW2-3|FSTL4	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1653320193291	3	325.165239	972.473888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.749	1	99.822	99.322	100.32	0.072716								0	0	0	0.42693	1	41766	41766		0.26902	0	1		+		3097	8626	1512	1523	3797	3797					-0.013449598659462936
DNAGICVR	8	Unmodified	_DNAGICVR_					0	0	0			REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	REV__nc|ENSG00000215421|Q9C0G0-3|ZNF407	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.2092773318291	2	424.20817	846.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.595	1	14.321	13.821	14.821	0.72639								0	0	0	1.0178	1	5645	5645		13.508	0	1		+		3098	11867	1513	1524	3798	3798					-0.027558742196447383
DNDDDQSD	8	Unmodified	_DNDDDQSD_					0	0	0		ENST00000502249.6_1_4:119401524-119435218:+|nuORF;ENSG00000143702|ENST00000366542|CEP170	ENST00000502249.6_1_4:119401524-119435218:+|nuORF	ENST00000502249.6_1_4:119401524-119435218:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1463806033134	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.262	1	74.072	73.572	74.572	1.8101								0	0	0	1.0178	1	30319	30319		0.6015	0	1				3099	3048	1514	1525	3799	3799					-0.18543503927890015
DNFQETMEAMH	11	Unmodified	_DNFQETMEAMH_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10	nc|ENSG00000133026|P35580|MYH10	nc|ENSG00000133026|P35580|MYH10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.4907409548759	4	338.886598	1351.51729	-2.8502	-0.0009659	-1.2334	-0.00041798	-4.0836	-0.0013839	339.1369637413485	11.983	0.58938	11.983	11.788	12.377	0					24	17	2	0	0	0	0.14606	1	5100	5100		0.094841	0	1	1451100			3100	2554	1515	1526	3800	3800					-0.14441182941618536
DNIAVYELV	9	Unmodified	_DNIAVYELV_					0	0	0			REV__nc|ENSG00000152208|O43424-2|GRID2	REV__nc|ENSG00000152208|O43424-2|GRID2	MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2741577029228	2	518.27149	1034.52843	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.484	1	82.717	82.217	83.217	1.2332								0	0	0	0.11571	1	34208	34208		32.305	5.4218	1		+		3101	10414	1516	1527	3801	3801					0.012543304864720994
DNISDKDPI	9	Unmodified	_DNISDKDPI_					0	0	0		ENST00000395715.7_1_8:116681042-116681180:-|nuORF	ENST00000395715.7_1_8:116681042-116681180:-|nuORF	ENST00000395715.7_1_8:116681042-116681180:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	509.3062621951103	2	508.748379	1015.4822	1.9803	0.0010075	-2.6916	-0.0013693	-0.71127	-0.00036186	508.74699211615604	42.654	0.30974	44.575	44.384	44.694	1.9211					15	9	2	0	0	0	0.086272	1	17896	17896		24.021	13.197	1	557100			3102	6293	1517	1528	3802	3802					-0.024917344156278887
DNLTKDMVL	9	Unmodified	_DNLTKDMVL_					0	0	0			REV__tr|A0A7D6W0K2|A0A7D6W0K2_9CLOTdUTPdiphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_23720PE=4SV=1	REV__tr|A0A7D6W0K2|A0A7D6W0K2_9CLOTdUTPdiphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_23720PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.3174316287041	2	524.7708	1047.52705	2.9977	0.0015731	-4.2301	-0.0022198	-1.2324	-0.00064672	524.768161340367	62.677	0.18057	64.091	64.045	64.226	1.4134					9	5	2	0	0	0	0.078322	1	26330	26330		34.102	7.7612	1	3252500	+		3103	15580	1518	1529	3803	3803					0.005183731260558488
DNQSLILL	8	Unmodified	_DNQSLILL_					0	0	0		chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.2628661990166	2	458.260925	914.507297	2.7762	0.0012722	1.8237	0.00083572	4.5999	0.0021079	458.26171325354375	86.906	0.91261	86.906	86.551	87.463	0					101	36	4	0	0	0	0.88587	2	36197	36197;36248		5.2307	2.6532	1	102900000			3104	299	1519	1530	3804;3805	3804					0.046623651776371844
DNQSLILL	8	Unmodified	_DNQSLILL_					0	0	0		chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2629272341728	2	458.260925	914.507297	2.9315	0.0013434	2.1642	0.00099176	5.0957	0.0023352	458.26168826906155	85.409	1.1205	86.567	86.303	87.423	1.159					124	45	4	0	0	0	0.88587	1	35994	35994		5.2307	2.6532	1	78436000			3105	299	1519	1530	3806	3806					0.046623651776371844
DNQSLILL	8	Unmodified	_DNQSLILL_					0	0	0		chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2652770876884	2	458.260925	914.507297	3.36	0.0015397	1.0635	0.00048736	4.4235	0.0020271	458.26117479241805	85.106	1.1491	86.703	86.341	87.491	1.5962					144	46	4	0	0	0	0.88587	3	35597	35597;35646;35934		5.2307	2.6532	1	73803000			3106	299	1519	1530	3807;3808;3809	3807					0.046623651776371844
DNQSLILL	8	Unmodified	_DNQSLILL_					0	0	0		chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	chr9:97569037-97589307|155|15.73|0.77|4.35|+|0|TMOD1,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	458.260925	914.507297	3.2022	0.0014675	1.6533	0.00075764	4.8555	0.0022251	458.261642843789	86.882	0.9509	87.126	86.576	87.527	0.24387	0.1099	-7.7898E-05	NaN	5.2307	107	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	105820000			3107	299	1519	1530							0.046623651776371844
DPCVLAFLL	9	Unmodified	_DPCVLAFLL_					0	0	0		ENST00000379235.5_1_9:33927886-33928030:-|nuORF	ENST00000379235.5_1_9:33927886-33928030:-|nuORF	ENST00000379235.5_1_9:33927886-33928030:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7727233767509	2	495.770071	989.52559	4.6577	0.0023091	-1.6534	-0.00081973	3.0043	0.0014894	495.7702831880029	87.693	0.3813	89.188	88.983	89.364	1.4953					14	11	2	0	0	0	0.46905	1	36977	36977		16.942	2.3606	1	1516600			3108	6210	1520	1531	3810	3810					0.03040783827964333
DPCVLAFLL	9	Unmodified	_DPCVLAFLL_					0	0	0		ENST00000379235.5_1_9:33927886-33928030:-|nuORF	ENST00000379235.5_1_9:33927886-33928030:-|nuORF	ENST00000379235.5_1_9:33927886-33928030:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	495.770071	989.52559	5.2877	0.0026215	-2.9014	-0.0014384	2.3863	0.001183	495.76968683116684	88.095	0.47868	89.151	88.922	89.401	1.0562	-0.01855	-0.00053257	NaN	16.942	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1501500			3109	6210	1520	1531							0.03040783827964333
DPDRMFVEL	9	Unmodified	_DPDRMFVEL_					0	0	0		nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2697021365166	2	561.268424	1120.5223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.57	1	59.538	59.038	60.038	1.9684								0	0	0	0.12487	1	24148	24148		27.223	10.11	1				3110	3101	1521	1532	3811	3811					-0.03314511016696997
DPDRMFVEL	9	Unmodified	_DPDRMFVEL_					0	0	0		nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2692748904228	2	561.268424	1120.5223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.698	1	59.667	59.167	60.167	1.969								0	0	0	0.068489	1	24201	24201		36.506	14.969	1				3111	3101	1521	1532	3812	3812					-0.03314511016696997
DPEEKCQTYKN	11	Unmodified	_DPEEKCQTYKN_					0	0	0		CON__REFSEQ:XP_585019	CON__REFSEQ:XP_585019	CON__REFSEQ:XP_585019	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2027465701103	3	452.20297	1353.58708	1.4627	0.00066144	-2.1634	-0.00097831	-0.70073	-0.00031687	452.20206404387045	25.867	0.66748	26.119	25.827	26.495	0.25197					54	21	4	0	0	0	0.87205	1	10837	10837		9.2438	0.49199	1	9057100		+	3112	366	1522	1533	3813	3813					-0.07556981001357599
DPFPAAIIL	9	Unmodified	_DPFPAAIIL_					0	0	0		ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK;chr8:27833133-27837710|421|26.09|0.78|5.07|-|ENST00000522944|PBK,PBK	ENSG00000168078|ENST00000301905|PBK	ENSG00000168078|ENST00000301905|PBK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7786437869072	2	478.776211	955.537869	4.9504	0.0023701	0.082275	3.9391E-05	5.0327	0.0024095	478.7760489891074	89.828	0.59666	90.847	90.646	91.243	1.0199					35	18	3	0	0	0	0.61249	1	37861	37861		10.824	2.2306	1	2572900			3113	295	1523	1534	3814	3814					0.058321435626680795
DPFPAAIIL	9	Unmodified	_DPFPAAIIL_					0	0	0		ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK;chr8:27833133-27837710|421|26.09|0.78|5.07|-|ENST00000522944|PBK,PBK	ENSG00000168078|ENST00000301905|PBK	ENSG00000168078|ENST00000301905|PBK	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	478.776211	955.537869	4.5206	0.0021644	-0.75973	-0.00036374	3.7609	0.0018006	478.77589842309214	89.436	0.53248	90.84	90.677	91.209	1.4045	-0.0036794	-0.00047916	NaN	10.824	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1313200			3114	295	1523	1534							0.058321435626680795
DPIHGHIEL	9	Unmodified	_DPIHGHIEL_					0	0	0		nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1;ENSG00000101347|ENST00000646673|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7720214724541	2	515.769448	1029.52434	0.94374	0.00048675	3.9627	0.0020438	4.9064	0.0025306	515.7707780772397	31.286	0.28053	32.567	32.375	32.655	1.2813					13	8	2	0	0	0	0.39927	1	13142	13142		20.454	9.6297	1	690930			3115	1339	1524	1535	3815	3815					0.010762857834379247
DPIHGHIEL	9	Unmodified	_DPIHGHIEL_					0	0	0		nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1;ENSG00000101347|ENST00000646673|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7705566287041	2	515.769448	1029.52434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.784	1	32.599	32.099	33.099	1.8151								0	0	0	0.041747	1	12903	12903		46.021	19.137	1				3116	1339	1524	1535	3816	3816					0.010762857834379247
DPIHGHIEL	9	Unmodified	_DPIHGHIEL_					0	0	0		nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1;ENSG00000101347|ENST00000646673|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	515.769448	1029.52434	1.0813	0.00055771	1.1632	0.00059992	2.2445	0.0011576	515.7695596665764	30.716	0.20301	32.531	32.388	32.591	1.8151	-0.017914	-0.0012686	NaN	20.454	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436300			3117	1339	1524	1535							0.010762857834379247
DPIYIITEL	9	Unmodified	_DPIYIITEL_					0	0	0		nc|ENSG00000111816|P42685-2|FRK;ENSG00000111816|ENST00000606080|FRK	nc|ENSG00000111816|P42685-2|FRK	nc|ENSG00000111816|P42685-2|FRK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8005248904228	2	538.79734	1075.58013	4.3238	0.0023296	1.2681	0.00068323	5.5919	0.0030129	538.7978590996248	87.146	0.62995	88.238	87.953	88.583	1.0918					54	20	4	0	0	0	0.083604	2	36754	36705;36754		54.774	7.8527	1	3264600			3118	1756	1525	1536	3817;3818	3818					0.04536074180373362
DPIYIITEL	9	Unmodified	_DPIYIITEL_					0	0	0		nc|ENSG00000111816|P42685-2|FRK;ENSG00000111816|ENST00000606080|FRK	nc|ENSG00000111816|P42685-2|FRK	nc|ENSG00000111816|P42685-2|FRK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7997924685478	2	538.79734	1075.58013	4.6127	0.0024853	0.50353	0.0002713	5.1162	0.0027566	538.7974975606053	86.765	0.50669	88.26	88.012	88.518	1.4953					47	16	4	0	0	0	0.39927	2	36537	36537;36612		20.454	6.9457	1	3155200			3119	1756	1525	1536	3819;3820	3819					0.04536074180373362
DPKPGSLW	8	Unmodified	_DPKPGSLW_					0	0	0			REV__nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1	REV__nc|ENSG00000198208|Q9Y6S9-2|RPS6KL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1880370974541	3	300.492232	898.454868	-0.2847	-8.5549E-05	1.1547	0.00034696	0.86995	0.00026141	300.4926631341146	16.71	0.63339	16.861	16.584	17.217	0.15093					44	21	3	0	0	0	2.3239	1	7027	7027		3.9444	2.4625	1	2445500	+		3120	14525	1526	1537	3821	3821					0.001578268346634104
DPLFNFII	8	Unmodified	_DPLFNFII_					0	0	0			REV__ENSG00000106128|ENST00000326139|GHRHR	REV__ENSG00000106128|ENST00000326139|GHRHR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7687255740166	2	489.768386	977.522219	4.9425	0.0024207	-4.2631	-0.0020879	0.67943	0.00033276	489.76693280588603	89.859	0.31312	90.879	90.708	91.022	1.0199					17	9	2	0	0	0	0.83518	1	37840	37840		18.135	1.1927	1	404700	+		3121	9203	1527	1538	3822	3822					0.03255857045621724
DPLFNFII	8	Unmodified	_DPLFNFII_					0	0	0			REV__ENSG00000106128|ENST00000326139|GHRHR	REV__ENSG00000106128|ENST00000326139|GHRHR	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	489.768386	977.522219	4.9425	0.0024207	-4.2631	-0.0020879	0.67943	0.00033276	489.76693280588603	89.859	0.31312	90.879	90.708	91.022	1.0199	0.032408	0.0005203	NaN	18.135	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404700	+		3122	9203	1527	1538							0.03255857045621724
DPLFNFII	8	Unmodified	_DPLFNFII_					0	0	0			REV__ENSG00000106128|ENST00000326139|GHRHR	REV__ENSG00000106128|ENST00000326139|GHRHR	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	489.768386	977.522219	4.6037	0.0022547	-5.0607	-0.0024786	-0.45702	-0.00022383	489.7668780329679	89.409	0.3438	90.814	90.707	91.05	1.4045	-0.032408	-0.00026103	NaN	18.135	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	327050	+		3123	9203	1527	1538							0.03255857045621724
DPLKDLVSL	9	Unmodified	_DPLKDLVSL_					0	0	0		nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000141905|P08651-5|NFIC;nc|ENSG00000141905|P08651-3|NFIC;nc|ENSG00000141905|P08651-6|NFIC;nc|ENSG00000141905|P08651-2|NFIC;ENSG00000141905|ENST00000443272|NFIC	nc|ENSG00000141905|P08651-4|NFIC	nc|ENSG00000141905|P08651-4|NFIC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2910644412041	2	500.289682	998.564812	3.1606	0.0015812	1.7864	0.0008937	4.947	0.0024749	500.2909951796815	64.688	0.74203	66.095	65.71	66.452	1.4071					59	23	3	0	0	0	0.014446	4	27106	27058;27106;27151;27205		103.82	24.227	1	6054700			3124	2976	1528	1539	3823;3824;3825;3826	3824					0.06547207383187015
DPLKDLVSL	9	Unmodified	_DPLKDLVSL_					0	0	0		nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000141905|P08651-5|NFIC;nc|ENSG00000141905|P08651-3|NFIC;nc|ENSG00000141905|P08651-6|NFIC;nc|ENSG00000141905|P08651-2|NFIC;ENSG00000141905|ENST00000443272|NFIC	nc|ENSG00000141905|P08651-4|NFIC	nc|ENSG00000141905|P08651-4|NFIC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2913696169853	2	500.289682	998.564812	2.3251	0.0011632	1.6215	0.00081122	3.9466	0.0019745	500.2914454698393	64.258	0.81428	66.186	65.704	66.518	1.928					61	25	3	0	0	0	0.010388	3	26965	26872;26914;26965		107.1	27.503	1	4513600			3125	2976	1528	1539	3827;3828;3829	3829					0.06547207383187015
DPLSLFQEL	9	Unmodified	_DPLSLFQEL_					0	0	0		ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2801391482353	2	531.279315	1060.54408	4.2286	0.0022465	-1.12	-0.00059502	3.1086	0.0016515	531.2787613157302	93.797	0.47794	94.668	94.417	94.895	0.87176					34	14	3	0	0	0	0.066815	1	39486	39486		61.357	27.255	1	1217100			3126	5046	1529	1540	3830	3830					0.01622617003522464
DPLSLFQEL	9	Unmodified	_DPLSLFQEL_					0	0	0		ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	ENSG00000198265|ENST00000358691|HELZ	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	531.279315	1060.54408	3.4917	0.001855	-1.1381	-0.00060462	2.3536	0.0012504	531.278869947325	93.429	0.47169	94.706	94.388	94.859	1.277	0.019068	-9.7832E-06	NaN	61.357	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1275500			3127	5046	1529	1540							0.01622617003522464
DPLVLGPLS	9	Unmodified	_DPLVLGPLS_					0	0	0			REV__ENSG00000180043|ENST00000424985|GARIN5B	REV__ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	455.7675048708916	2	455.765843	909.517133	2.3252	0.0010598	-0.2179	-9.9312E-05	2.1073	0.00096045	455.76601254925663	79.232	0.31243	79.532	79.31	79.623	0.30046					13	9	2	0	0	0	0.51189	1	33142	33142		14.838	2.3067	1	868150	+		3128	11287	1530	1541	3831	3831					0.05875553183000193
DPLWLSESPV	10	Unmodified	_DPLWLSESPV_					0	0	0			REV__CHRNB3|p.I303Dfs*28|1|0.1|ENSG00000147432|chr8:42732213-42732214|-/GACAGAAAAGACTTCTTCGATAACGGAGAATGGG|frameshift_variant	REV__CHRNB3|p.I303Dfs*28|1|0.1|ENSG00000147432|chr8:42732213-42732214|-/GACAGAAAAGACTTCTTCGATAACGGAGAATGGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.7909423708916	2	571.790047	1141.56554	1.9193	0.0010975	0.71287	0.00040761	2.6322	0.0015051	571.7905843931884	77.273	0.37655	77.589	77.355	77.732	0.31653					17	11	2	0	0	0	0.846	1	32288	32288		7.2892	0.56607	1	1317900	+		3129	8350	1531	1542	3832	3832					0.0004200203222808341
DPMKARVVL	9	Unmodified	_DPMKARVVL_					0	0	0		nc|ENSG00000143742|P49458-2|SRP9;ENSG00000143742|ENST00000304786|SRP9	nc|ENSG00000143742|P49458-2|SRP9	nc|ENSG00000143742|P49458-2|SRP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.7985107302666	2	514.799694	1027.58484	0.95476	0.00049151	-2.0189	-0.0010393	-1.0641	-0.00054781	514.7991925861479	26.336	0.24604	28.083	27.912	28.158	1.747					11	7	2	0	0	0	0.053939	1	11022	11022		46.021	20.622	1	971770			3130	3049	1532	1543	3833	3833					0.07214679842149962
DPMKARVVL	9	Unmodified	_DPMKARVVL_					0	0	0		nc|ENSG00000143742|P49458-2|SRP9;ENSG00000143742|ENST00000304786|SRP9	nc|ENSG00000143742|P49458-2|SRP9	nc|ENSG00000143742|P49458-2|SRP9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	514.799694	1027.58484	1.4221	0.00073207	-1.0136	-0.00052181	0.40843	0.00021026	514.7995254302754	26.858	0.24125	28.13	27.963	28.205	1.2715	0.023244	0.00048174	NaN	46.021	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1271200			3131	3049	1532	1543							0.07214679842149962
DPNLEFVAM	9	Oxidation (M)	_DPNLEFVAM(Oxidation (M))_		DPNLEFVAM(1)		DPNLEFVAM(54)	0	0	1		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2423583865166	2	526.241875	1050.4692	2.6953	0.0014184	-0.25509	-0.00013424	2.4402	0.0012841	526.2414129660023	50.044	0.53723	51.435	51.261	51.798	1.3911					26	16	2	0	0	0	0.086433	1	20986	20986		53.833	24.751	1	1295800			3132	2528	1533	1544	3834	3834		48			-0.05401888799360677
DPNLEFVAM	9	Oxidation (M)	_DPNLEFVAM(Oxidation (M))_		DPNLEFVAM(1)		DPNLEFVAM(42)	0	0	1		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2426635622978	2	526.241875	1050.4692	1.7487	0.00092026	-0.48785	-0.00025673	1.2609	0.00066354	526.2415761601138	49.704	0.47113	51.681	51.443	51.914	1.9772					27	14	2	0	0	0	0.12216	1	20812	20812		41.956	17.746	1	1442400			3133	2528	1533	1544	3835	3835		48			-0.05401888799360677
DPNLEFVAM	9	Unmodified	_DPNLEFVAM_					0	0	0		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2457153201103	2	518.244418	1034.47428	2.2827	0.001183	-0.78848	-0.00040863	1.4942	0.00077437	518.2442341367276	68.71	0.83044	70.076	69.784	70.614	1.3657					73	26	4	0	0	0	0.031145	3	28860	28811;28860;28901		85.642	49.597	1	5875400			3134	2528	1533	1545	3836;3837;3838	3837					-0.04157584936751846
DPNLEFVAM	9	Unmodified	_DPNLEFVAM_					0	0	0		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1035.481494128704	1	1035.48156	1034.47428	1.4452	0.0014965	0.22758	0.00023565	1.6728	0.0017322	1035.4808462139931	68.731	0.47531	70.097	69.875	70.35	1.3657					20	14	2	0	0	0	0.0066739	1	28842	28842		115.69	81.59	1	1594500			3135	2528	1533	1545	3839	3839					-0.04157584936751846
DPNLEFVAM	9	Unmodified	_DPNLEFVAM_					0	0	0		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2460815310478	2	518.244418	1034.47428	2.1219	0.0010996	-0.10149	-5.2597E-05	2.0204	0.001047	518.2445853919623	68.316	0.74721	70.186	69.858	70.605	1.87					71	23	4	0	0	0	0.024001	4	28652	28604;28652;28691;28732		96.111	60.374	1	7968700			3136	2528	1533	1545	3840;3841;3842;3843	3841					-0.04157584936751846
DPNLEFVAM	9	Unmodified	_DPNLEFVAM_					0	0	0		ENST00000455094.1_1_6:30454046-30454364:+|nuORF;ENSG00000132341|ENST00000543796|RAN	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	ENST00000455094.1_1_6:30454046-30454364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1035.482836902142	1	1035.48156	1034.47428	2.8432	0.0029441	-0.3041	-0.00031489	2.5391	0.0026292	1035.4810521293364	68.305	0.53868	70.175	69.917	70.456	1.87					27	16	2	0	0	0	0.010279	1	28646	28646		107.19	74.882	1	1129400			3137	2528	1533	1545	3844	3844					-0.04157584936751846
DPNLLRQLLP	10	Unmodified	_DPNLLRQLLP_					0	0	0		ENST00000476046.1_1_10:28884921-28897371:+|nuORF;nc|ENSG00000095787|Q9BTA9-3|WAC;nc|ENSG00000095787|Q9BTA9-5|WAC;nc|ENSG00000095787|Q9BTA9-2|WAC;ENSG00000095787|ENST00000354911|WAC	ENST00000476046.1_1_10:28884921-28897371:+|nuORF	ENST00000476046.1_1_10:28884921-28897371:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.2412597537041	3	393.567912	1177.68191	1.7135	0.00067436	3.1699	0.0012476	4.8833	0.0019219	393.56898286822656	39.172	0.22158	40.468	40.35	40.572	1.2961					11	6	2	0	0	0	0.1249	1	16411	16411		12.873	9.8774	1	1171400			3138	1190	1534	1546	3845	3845					0.10017365322801197
DPRLREDMA	9	Unmodified	_DPRLREDMA_					0	0	0		nc|ENSG00000114626|Q969K4-2|ABTB1;nc|ENSG00000114626|Q969K4-4|ABTB1;nc|ENSG00000114626|Q969K4-3|ABTB1;ENSG00000114626|ENST00000232744|ABTB1	nc|ENSG00000114626|Q969K4-2|ABTB1	nc|ENSG00000114626|Q969K4-2|ABTB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.2169677615166	2	551.769123	1101.52369	1.7218	0.00095005	0.63538	0.00035059	2.3572	0.0013006	551.7697633637995	45.012	0.47333	46.972	46.703	47.176	1.9596					31	14	3	0	0	0	0.11275	1	18828	18828		10.074	0	1	1490900			3139	1872	1535	1547	3846	3846					-0.023008769279385888
DPRRMFEHK	9	Unmodified	_DPRRMFEHK_					0	0	0			REV__PLCB2|p.R697Tfs*25|1|0.05|ENSG00000137841|chr15:40293698-40293699|-/C|frameshift_variant	REV__PLCB2|p.R697Tfs*25|1|0.05|ENSG00000137841|chr15:40293698-40293699|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	405.1781494021416	3	405.87323	1214.59786	-0.76154	-0.00030909	0.23858	9.6832E-05	-0.52296	-0.00021226	405.87383878653395	15.141	0.12511	15.141	15.061	15.186	0					6	3	2	0	0	0	0.11901	1	6268	6268		2.7352	0	1	712130	+		3140	10031	1536	1548	3847	3847					-0.0008548904575036431
DPSCPNGSCW	10	Unmodified	_DPSCPNGSCW_					0	0	0		EGFR|p.C333Pfs*5|1|0.19|ENSG00000146648|chr7:55155937-55155938|TG/-|frameshift_variant;nc|ENSG00000146648|P00533-2|EGFR;EGFR|p.S464Rfs*34|1|0.1|ENSG00000146648|chr7:55160228-55160229|-/CAGG|frameshift_variant;nc|ENSG00000146648|P00533-4|EGFR;nc|ENSG00000146648|P00533-3|EGFR;EGFR|p.H835Sfs*17|1|0.02|ENSG00000146648|chr7:55191751-55191752|-/AGCCTAACTCTCCCTTT|frameshift_variant;ENSG00000146648|ENST00000275493|EGFR	EGFR|p.C333Pfs*5|1|0.19|ENSG00000146648|chr7:55155937-55155938|TG/-|frameshift_variant	EGFR|p.C333Pfs*5|1|0.19|ENSG00000146648|chr7:55155937-55155938|TG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1934081912041	2	533.191859	1064.36917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.59	1	99.663	99.163	100.16	0.072716								0	0	0	0.6624	1	41699	41699		0.40072	0.40072	1				3141	441	1537	1549	3848	3848					-0.1604444940483063
DPSEVLTML	9	Unmodified	_DPSEVLTML_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1004.497607409954	1	1004.49687	1003.4896	2.8991	0.0029121	-1.0137	-0.0010183	1.8853	0.0018938	1004.4950984747566	77.073	0.41338	78.354	78.094	78.507	1.2809					26	12	3	0	0	0	0.026628	2	32364	32313;32364		92.822	30.583	1	1610800			3142	3042	1538	1550	3849;3850	3850					-0.012007181395688349
DPSEVLTML	9	Unmodified	_DPSEVLTML_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7524902224541	2	502.752075	1003.4896	2.6863	0.0013505	-2.8204	-0.001418	-0.1341	-6.7421E-05	502.7508436724286	77.049	0.91774	78.33	77.97	78.888	1.2809					63	28	4	0	0	0	0.03795	2	32334	32334;32394		77.984	28.402	1	4010400			3143	3042	1538	1550	3851;3852	3851					-0.012007181395688349
DPSEVLTML	9	Unmodified	_DPSEVLTML_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7522765994072	2	502.752075	1003.4896	1.9745	0.00099269	-1.8402	-0.00092518	0.13429	6.7514E-05	502.7511824487162	76.73	0.7384	78.498	78.095	78.834	1.7672					41	22	2	0	0	0	0.031324	2	32156	32106;32156		85.357	27.129	1	3615400			3144	3042	1538	1550	3853;3854	3854					-0.012007181395688349
DPSEVVITL	9	Unmodified	_DPSEVVITL_					0	0	0		ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant;ZNFX1|p.R534Sfs*17|1|0.07|ENSG00000124201|chr20:49270210-49270211|-/TAGAAACCTAGAGTGAAGGCTCCGTCCCTTG|frameshift_variant;nc|ENSG00000124201|Q9P2E3-2|ZNFX1;ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant;ENSG00000124201|ENST00000396105|ZNFX1	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.3121520876884	2	486.76604	971.517527	3.0652	0.001492	2.2244	0.0010827	5.2895	0.0025748	486.7667361845354	65.239	0.43742	66.638	66.443	66.881	1.3989					22	13	2	0	0	0	0.047433	1	27393	27393		39.957	0	1	2263900			3145	2216	1539	1551	3855	3855					0.030629281121946406
DPSEVVITL	9	Unmodified	_DPSEVVITL_					0	0	0		ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant;ZNFX1|p.R534Sfs*17|1|0.07|ENSG00000124201|chr20:49270210-49270211|-/TAGAAACCTAGAGTGAAGGCTCCGTCCCTTG|frameshift_variant;nc|ENSG00000124201|Q9P2E3-2|ZNFX1;ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant;ENSG00000124201|ENST00000396105|ZNFX1	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5265991091728	1	972.524804	971.517527	1.6136	0.0015692	2.0544	0.0019979	3.6679	0.0035672	972.5261800224816	64.953	0.52924	66.862	66.627	67.157	1.9085					29	16	2	0	0	0	0.026628	1	27243	27243		92.822	35.351	1	1915400			3146	2216	1539	1551	3856	3856					0.030629281121946406
DPSLLMETI	9	Unmodified	_DPSLLMETI_					0	0	0			REV__tr|A0A553SGI3|A0A553SGI3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10925PE=3SV=1	REV__tr|A0A553SGI3|A0A553SGI3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10925PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7609130740166	2	509.759901	1017.50525	3.7565	0.0019149	-0.96418	-0.0004915	2.7924	0.0014234	509.75962387686377	72.846	0.52892	74.176	73.852	74.381	1.3297					52	16	5	0	0	0	0.13873	1	30508	30508		39.957	5.8549	1	15706000	+		3147	14749	1540	1552	3857	3857					-0.002804316225024195
DPSPCLFPVF	10	Unmodified	_DPSPCLFPVF_					0	0	0			REV__ENST00000596655.1_1_19:51302184-51302277:-|nuORF	REV__ENST00000596655.1_1_19:51302184-51302277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2718994021416	2	561.270435	1120.52632	0.93339	0.00052389	3.3704	0.0018917	4.3038	0.0024156	561.272249170442	50.456	0.29845	52.431	52.248	52.546	1.9753					16	9	2	0	0	0	0.41677	1	21141	21141		32.305	7.6316	1	1731200	+		3148	14093	1541	1553	3858	3858					-0.029124215229785477
DPSPCLFPVF	10	Unmodified	_DPSPCLFPVF_					0	0	0			REV__ENST00000596655.1_1_19:51302184-51302277:-|nuORF	REV__ENST00000596655.1_1_19:51302184-51302277:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	561.270435	1120.52632	0.93339	0.00052389	3.3704	0.0018917	4.3038	0.0024156	561.272249170442	50.456	0.29845	52.431	52.248	52.546	1.9753	-0.0051704	-0.0019389	NaN	32.305	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1731200	+		3149	14093	1541	1553							-0.029124215229785477
DPSSVLLFL	9	Unmodified	_DPSSVLLFL_					0	0	0		ENST00000474704.1_1_17:27041945-27042505:-|nuORF;nc|ENSG00000109113|Q9BZG1-4|RAB34;nc|ENSG00000109113|Q9BZG1-2|RAB34;ENSG00000109113|ENST00000395245|RAB34	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7819396853447	2	495.778951	989.543348	3.7855	0.0018768	2.0688	0.0010257	5.8543	0.0029024	495.7799381220223	96.893	0.16467	97.178	97.077	97.242	0.28442					13	5	3	0	0	0	0.059546	1	40773	40773		64.236	13.381	1	3531600			3150	1658	1542	1554	3859	3859					0.04815822354487409
DPSSVLLFL	9	Unmodified	_DPSSVLLFL_					0	0	0		ENST00000474704.1_1_17:27041945-27042505:-|nuORF;nc|ENSG00000109113|Q9BZG1-4|RAB34;nc|ENSG00000109113|Q9BZG1-2|RAB34;ENSG00000109113|ENST00000395245|RAB34	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.5522949099541	1	990.550625	989.543348	3.7903	0.0037545	-4.3896	-0.0043481	-0.59931	-0.00059365	990.548968914122	96.773	0.15804	97.079	96.975	97.133	0.3062					6	4	2	0	0	0	0.042029	1	40702	40702		74.423	16.951	1	3213900			3151	1658	1542	1554	3860	3860					0.04815822354487409
DPSSVLLFL	9	Unmodified	_DPSSVLLFL_					0	0	0		ENST00000474704.1_1_17:27041945-27042505:-|nuORF;nc|ENSG00000109113|Q9BZG1-4|RAB34;nc|ENSG00000109113|Q9BZG1-2|RAB34;ENSG00000109113|ENST00000395245|RAB34	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	ENST00000474704.1_1_17:27041945-27042505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7828857302666	2	495.778951	989.543348	3.2386	0.0016056	2.4465	0.0012129	5.6851	0.0028186	495.77999579491234	96.779	0.22149	97.085	96.975	97.196	0.3062					11	6	3	0	0	0	0.042029	1	40704	40704		74.423	23.568	1	2848300			3152	1658	1542	1554	3861	3861					0.04815822354487409
DPTDCGPMGRR	11	Unmodified	_DPTDCGPMGRR_					0	0	0		ENSG00000005238|ENST00000322813|ATOSB;nc|ENSG00000005238|Q7L5A3-2|ATOSB	ENSG00000005238|ENST00000322813|ATOSB	ENSG00000005238|ENST00000322813|ATOSB	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1797668337822	3	402.178102	1203.51248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.793	1	7.8693	7.3693	8.3693	0.07632								0	0	0	0.63775	1	3224	3224		0.45452	0.053801	1				3153	485	1543	1555	3862	3862					-0.08114022293739254
DPVEQLVRHF	10	Unmodified	_DPVEQLVRHF_					0	0	0		nc|ENSG00000111077|Q63HR2-5|TNS2;TNS2|p.P1240Lfs*67|1|0.09|ENSG00000111077|chr12:53062426-53062427|-/T|frameshift_variant;nc|ENSG00000111077|Q63HR2-2|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2;ENST00000552168.1_1_12:53455887-53456624:+|nuORF	nc|ENSG00000111077|Q63HR2-5|TNS2	nc|ENSG00000111077|Q63HR2-5|TNS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.3314697146416	2	620.327662	1238.64077	2.2123	0.0013724	3.5731	0.0022165	5.7854	0.0035888	620.3287184274665	71.947	0.48639	73.771	73.57	74.056	1.824					29	15	3	0	0	0	0.82019	1	30193	30193		10.074	1.3285	1	2655600			3154	1725	1544	1556	3863	3863					0.030996042833066895
DPVKDVLIL	9	Unmodified	_DPVKDVLIL_					0	0	0		ENST00000485662.1_1_1:79126346-79129493:+|nuORF;ENST00000476911.1_1_1:79128352-79129493:+|nuORF;ENSG00000137965|ENST00000370747|IFI44	ENST00000485662.1_1_1:79126346-79129493:+|nuORF	ENST00000485662.1_1_1:79126346-79129493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3112060427666	2	506.307875	1010.6012	3.5337	0.0017891	1.5768	0.00079836	5.1105	0.0025875	506.30881714431064	60.717	0.31584	62.137	61.933	62.249	1.4196					22	9	3	0	0	0	0.093059	1	25476	25476		51.63	13.656	1	1248600			3155	2804	1545	1557	3864	3864					0.09632084279917308
DPVKDVLIL	9	Unmodified	_DPVKDVLIL_					0	0	0		ENST00000485662.1_1_1:79126346-79129493:+|nuORF;ENST00000476911.1_1_1:79128352-79129493:+|nuORF;ENSG00000137965|ENST00000370747|IFI44	ENST00000485662.1_1_1:79126346-79129493:+|nuORF	ENST00000485662.1_1_1:79126346-79129493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3101989626884	2	506.307875	1010.6012	3.2053	0.0016229	2.8993	0.001468	6.1047	0.0030908	506.309637295603	60.16	0.31513	62.125	61.977	62.292	1.9653					20	9	3	0	0	0	0.16939	1	25267	25267		36.506	5.8697	1	1471700			3156	2804	1545	1557	3865	3865					0.09632084279917308
DPVQRRALETM	11	Unmodified	_DPVQRRALETM_					0	0	0		ENSG00000143669|ENST00000389793|LYST;ENST00000473037.5_1_1:235826242-235897989:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MSMS	GG20161007_CRH_Patient100_W632_02	4	658.3419677615166	2	658.342986	1314.67142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.173	1	19.621	19.121	20.121	1.448								0	0	0	0.63774	1	7555	7555		8.1555	0.54658	1				3157	3047	1546	1558	3866	3866					0.026670146060496336
DPYQGTIVL	9	Unmodified	_DPYQGTIVL_					0	0	0		nc|ENSG00000116984|Q99707-2|MTR;ENSG00000116984|ENST00000366577|MTR	nc|ENSG00000116984|Q99707-2|MTR	nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1005.527392566204	1	1005.52514	1004.51786	1.3309	0.0013382	-0.12019	-0.00012085	1.2107	0.0012174	1005.5257908382962	56.531	0.27651	57.945	57.816	58.093	1.4145					12	8	2	0	0	0	0.070055	1	23691	23691		60.074	18.234	1	1037300			3158	1993	1547	1559	3867	3867					0.01578347832048621
DPYQGTIVL	9	Unmodified	_DPYQGTIVL_					0	0	0		nc|ENSG00000116984|Q99707-2|MTR;ENSG00000116984|ENST00000366577|MTR	nc|ENSG00000116984|Q99707-2|MTR	nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2669555544853	2	503.266207	1004.51786	0.92995	0.00046801	1.04	0.00052339	1.9699	0.0009914	503.26685319202153	56.007	0.30804	57.975	57.841	58.149	1.9684					19	9	3	0	0	0	0.20244	1	23497	23497		32.786	0.4802	1	2311100			3159	1993	1547	1559	3868	3868					0.01578347832048621
DPYQGTIVL	9	Unmodified	_DPYQGTIVL_					0	0	0		nc|ENSG00000116984|Q99707-2|MTR;ENSG00000116984|ENST00000366577|MTR	nc|ENSG00000116984|Q99707-2|MTR	nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1005.523364245892	1	1005.52514	1004.51786	1.355	0.0013625	-2.6426	-0.0026572	-1.2876	-0.0012947	1005.5233192957172	56.073	0.27814	58.042	57.871	58.149	1.9684					11	8	2	0	0	0	0.093059	1	23523	23523		51.63	15.503	1	960790			3160	1993	1547	1559	3869	3869					0.01578347832048621
DQAASIVEL	9	Unmodified	_DQAASIVEL_					0	0	0			REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2486450076103	2	473.248015	944.481476	2.0672	0.00097828	-1.7831	-0.00084386	0.28404	0.00013442	473.24798320715354	49.42	0.40067	50.811	50.548	50.948	1.3911					19	12	2	0	0	0	0.22154	1	20634	20634		30.637	0	1	1829300	+		3161	12765	1548	1560	3870	3870					0.007014709353256876
DQAASIVEL	9	Unmodified	_DQAASIVEL_					0	0	0			REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2475158572197	2	473.248015	944.481476	2.1405	0.001013	-1.3135	-0.00062162	0.82696	0.00039136	473.2474713840717	48.82	0.40184	50.797	50.576	50.978	1.9772					17	12	2	0	0	0	0.39927	1	20504	20504		20.454	0	1	1456200	+		3162	12765	1548	1560	3871	3871					0.007014709353256876
DQAASIVEL	9	Unmodified	_DQAASIVEL_					0	0	0			REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	REV__ENST00000381006.7_1_4:71587718-71587817:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	473.248015	944.481476	2.0672	0.00097828	-1.7831	-0.00084386	0.28404	0.00013442	473.24798320715354	49.42	0.40067	50.811	50.548	50.948	1.3911	0.007063	-0.00027591	NaN	30.637	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1829300	+		3163	12765	1548	1560							0.007014709353256876
DQDTEDDEWEK	11	Unmodified	_DQDTEDDEWEK_					0	0	0		ENST00000249377.4_1_7:102582770-102585051:+|nuORF;ENSG00000128606|ENST00000339431|LRRC17	ENST00000249377.4_1_7:102582770-102585051:+|nuORF	ENST00000249377.4_1_7:102582770-102585051:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.8498107790947	3	470.516159	1408.52665	0.9455	0.00044487	-0.12068	-5.6783E-05	0.82482	0.00038809	470.5166502905249	12.097	0.86227	12.097	11.605	12.467	0					78	27	5	0	0	0	1.0224	1	4953	4953		2.4348	0	1	5764500			3164	2375	1549	1561	3872	3872					-0.16127419850749902
DQDTEDDEWEK	11	Unmodified	_DQDTEDDEWEK_					0	0	0		ENST00000249377.4_1_7:102582770-102585051:+|nuORF;ENSG00000128606|ENST00000339431|LRRC17	ENST00000249377.4_1_7:102582770-102585051:+|nuORF	ENST00000249377.4_1_7:102582770-102585051:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.8508788943291	3	470.516159	1408.52665	-0.1297	-6.1024E-05	0.19255	9.0599E-05	0.062856	2.9575E-05	470.51647994082055	11.673	0.50109	12.367	12.101	12.602	0.69396					39	15	4	0	0	0	1.0369	1	4914	4914		1.1098	0.41209	1	660550			3165	2375	1549	1561	3873	3873					-0.16127419850749902
DQEKYHSYEHY	11	Unmodified	_DQEKYHSYEHY_					0	0	0			REV__ENSG00000110057|ENST00000227471|UNC93B1	REV__ENSG00000110057|ENST00000227471|UNC93B1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	750.6342651247978	2	749.815313	1497.61607	0.78334	0.00058736	4.3198	0.003239	5.1031	0.0038264	750.3188211073516	16.181	0.22151	16.181	16.087	16.309	0					9	6	2	0	0	0	0.14606	1	6729	6729		4.897	1.9018	1	374380	+		3166	9290	1550	1562	3874	3874					-0.11283120380699074
DQERDGMSDT	10	Unmodified	_DQERDGMSDT_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1526367068291	3	385.152387	1152.43533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.98	1	97.265	96.765	97.765	0.28442								0	0	0	0.66254	1	40805	40805		0.15932	0	1				3167	6182	1551	1563	3875	3875					-0.13478962029057584
DQERDGMSDT	10	Unmodified	_DQERDGMSDT_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535217165947	3	385.152387	1152.43533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.808	1	98.036	97.536	98.536	0.22776								0	0	0	0.66254	1	41163	41163		0.15932	0	1				3168	6182	1551	1563	3876	3876					-0.13478962029057584
DQERDGMSDT	10	Unmodified	_DQERDGMSDT_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1528503298759	3	385.152387	1152.43533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.942	1	98.199	97.699	98.699	0.25636								0	0	0	0.66254	1	41206	41206		0.15932	0	1				3169	6182	1551	1563	3877	3877					-0.13478962029057584
DQERDGMSDT	10	Unmodified	_DQERDGMSDT_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1529113650322	3	385.152387	1152.43533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.035	1	98.291	97.791	98.791	0.25636								0	0	0	0.66254	1	41246	41246		0.15932	0	1				3170	6182	1551	1563	3878	3878					-0.13478962029057584
DQERDGMSDT	10	Unmodified	_DQERDGMSDT_					0	0	0		ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	ENST00000375612.4_X:52239250-52240501:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1539794802666	3	385.152387	1152.43533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.414	1	98.671	98.171	99.171	0.25636								0	0	0	0.66254	1	41415	41415		0.15932	0	1				3171	6182	1551	1563	3879	3879					-0.13478962029057584
DQGLFVVKV	9	Unmodified	_DQGLFVVKV_					0	0	0			REV__tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	REV__tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.7936889529228	2	502.792392	1003.57023	1.9581	0.00098451	0.71643	0.00036022	2.6745	0.0013447	502.79260579256135	52.9	0.37931	52.9	52.695	53.075	0					27	11	3	0	0	0	0.10473	1	22065	22065		47.749	9.7747	1	3492000	+		3172	14831	1552	1564	3880	3880					0.06858930965665877
DQGLFVVKV	9	Unmodified	_DQGLFVVKV_					0	0	0			REV__tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	REV__tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7947875857353	2	502.792392	1003.57023	2.1964	0.0011043	1.2285	0.00061766	3.4248	0.001722	502.79320402286953	52.287	0.34224	52.613	52.435	52.777	0.32554					24	10	3	0	0	0	0.093059	1	21893	21893		51.63	17.228	1	3403700	+		3173	14831	1552	1564	3881	3881					0.06858930965665877
DQGRSDDYDS	10	Unmodified	_DQGRSDDYDS_					0	0	0		nc|ENSG00000158941|Q8N163-2|CCAR2;ENSG00000158941|ENST00000308511|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.2230712771416	2	579.220714	1156.42687	2.4709	0.0014312	1.8012	0.0010433	4.2721	0.0024745	579.2219864354736	69.585	0.56587	71.438	71.168	71.734	1.853					71	17	6	0	0	0	0.8325	1	29237	29237		8.7454	1.4562	1	10400000			3174	3513	1553	1565	3882	3882					-0.1450819267404313
DQGTLYLNPIP	11	Unmodified	_DQGTLYLNPIP_					0	0	0			REV__ENSG00000042445|ENST00000295802|RETSAT	REV__ENSG00000042445|ENST00000295802|RETSAT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8210937380791	2	615.821878	1229.6292	0.51517	0.00031725	-1.1153	-0.0006868	-0.60009	-0.00036955	615.820911559394	57.934	0.26834	59.903	59.784	60.053	1.969					11	8	2	0	0	0	0.47055	1	24303	24303		24.882	4.467	1	1450900	+		3175	8598	1554	1566	3883	3883					0.023573624693199235
DQGTLYLNPIP	11	Unmodified	_DQGTLYLNPIP_					0	0	0			REV__ENSG00000042445|ENST00000295802|RETSAT	REV__ENSG00000042445|ENST00000295802|RETSAT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	615.821878	1229.6292	0.75649	0.00046587	-1.6685	-0.0010275	-0.91198	-0.00056162	615.8209013709914	58.475	0.28255	59.893	59.752	60.035	1.4181	0.0061051	-0.0002692	NaN	24.882	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2148000	+		3176	8598	1554	1566							0.023573624693199235
DQGTLYLNPIP	11	Unmodified	_DQGTLYLNPIP_					0	0	0			REV__ENSG00000042445|ENST00000295802|RETSAT	REV__ENSG00000042445|ENST00000295802|RETSAT	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	615.821878	1229.6292	0.51517	0.00031725	-1.1153	-0.0006868	-0.60009	-0.00036955	615.820911559394	57.934	0.26834	59.903	59.784	60.053	1.969	0.015591	0.00041217	NaN	24.882	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1450900	+		3177	8598	1554	1566							0.023573624693199235
DQIKLYIEI	9	Unmodified	_DQIKLYIEI_					0	0	0			REV__ENST00000376170.8_2_10:27036944-27037043:-|nuORF	REV__ENST00000376170.8_2_10:27036944-27037043:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	567.3305541872978	2	567.823889	1133.63323	2.2292	0.0012658	-3.8557	-0.0021894	-1.6265	-0.00092359	567.8228100357514	72.137	0.50137	73.468	73.143	73.644	1.331					25	15	2	0	0	0	0.11833	1	30143	30143		1.8442	0	1	1224900	+		3178	12720	1555	1567	3884	3884					0.07175451963007617
DQLDTSIQFVH	11	Unmodified	_DQLDTSIQFVH_					0	0	0			REV__ENSG00000132205|ENST00000254528|EMILIN2	REV__ENSG00000132205|ENST00000254528|EMILIN2	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8822509646416	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.031	1	50.031	49.531	50.531	0								0	0	0	0.63775	1	20876	20876		0.50596	0.051438	1		+		3179	9840	1556	1568	3885	3885					-0.013567270243811436
DQLDTSIQFVH	11	Unmodified	_DQLDTSIQFVH_					0	0	0			REV__ENSG00000132205|ENST00000254528|EMILIN2	REV__ENSG00000132205|ENST00000254528|EMILIN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8822204470634	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.115	1	36.933	36.433	37.433	1.8176								0	0	0	0.63775	1	14724	14724		0.50596	0.051438	1		+		3180	9840	1556	1568	3886	3886					-0.013567270243811436
DQLDTSIQFVH	11	Unmodified	_DQLDTSIQFVH_					0	0	0			REV__ENSG00000132205|ENST00000254528|EMILIN2	REV__ENSG00000132205|ENST00000254528|EMILIN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8832885622978	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.226	1	48.196	47.696	48.696	1.9703								0	0	0	0.63775	1	19366	19366		0.50596	0	1		+		3181	9840	1556	1568	3887	3887					-0.013567270243811436
DQLDTSIQFVH	11	Unmodified	_DQLDTSIQFVH_					0	0	0			REV__ENSG00000132205|ENST00000254528|EMILIN2	REV__ENSG00000132205|ENST00000254528|EMILIN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831664919853	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.386	1	48.356	47.856	48.856	1.9703								0	0	0	0.63775	1	19431	19431		0.50596	0.051438	1		+		3182	9840	1556	1568	3888	3888					-0.013567270243811436
DQLRLRRRPN	10	Unmodified	_DQLRLRRRPN_					0	0	0			REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.6979247927666	4	331.698364	1322.76435	-1.9288	-0.00063977	0.78944	0.00026186	-1.1393	-0.00037792	331.6986574452879	39.628	0.61618	39.628	39.235	39.852	0					53	19	4	0	0	0	0.89803	2	16507	16507;16560		1.5923	0.37745	1	3989200	+		3183	8084	1557	1569	3889;3890	3889					0.11587700174300153
DQLRLRRRPN	10	Unmodified	_DQLRLRRRPN_					0	0	0			REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.9489929080009	4	331.698364	1322.76435	1.018	0.00033766	-1.1983	-0.00039748	-0.18035	-5.9821E-05	331.6977428660736	38.847	0.65912	39.156	38.857	39.516	0.30857					42	21	3	0	0	0	0.89803	1	16364	16364		1.5923	0.48253	1	3378300	+		3184	8084	1557	1569	3891	3891					0.11587700174300153
DQLRLRRRPN	10	Unmodified	_DQLRLRRRPN_					0	0	0			REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	331.698364	1322.76435	1.0665	0.00035376	-0.52959	-0.00017566	0.53693	0.0001781	331.6981181332035	39.701	0.39741	40.014	39.767	40.164	0.31263	0.26221	-0.00044875	NaN	1.5923	37	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3102900	+		3185	8084	1557	1569							0.11587700174300153
DQLRLRRRPN	10	Unmodified	_DQLRLRRRPN_					0	0	0			REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	331.698364	1322.76435	0.31736	0.00010527	-0.74093	-0.00024576	-0.42357	-0.0001405	331.6979335188137	38.415	0.35883	39.711	39.506	39.865	1.2961	-0.040464	-0.00072916	NaN	1.5923	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4092900	+		3186	8084	1557	1569							0.11587700174300153
DQLRLRRRPN	10	Unmodified	_DQLRLRRRPN_					0	0	0			REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	REV__ADCY3|p.A709*|1|0.16|ENSG00000138031|chr2:24830732-24830756|CCAGGATGAAGATGGCGAGCATGGC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	331.698364	1322.76435	0.24489	8.1229E-05	-1.2206	-0.00040487	-0.97569	-0.00032364	331.6978523222766	37.834	0.33304	39.654	39.455	39.788	1.8202	-0.097587	-0.0013656	NaN	1.5923	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3547600	+		3187	8084	1557	1569							0.11587700174300153
DQNPNPVDK	9	Unmodified	_DQNPNPVDK_					0	0	0			REV__ENSG00000136937|ENST00000375147|NCBP1	REV__ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7477905154228	2	513.74617	1025.47779	0.67451	0.00034653	2.0432	0.0010497	2.7177	0.0013962	513.7473371379857	9.8606	1.8933	9.8606	9.496	11.389	0					114	62	3	0	0	0	0.44512	1	4041	4041		18.146	8.0724	1	2009400	+		3188	10003	1558	1570	3892	3892					-0.03393198838534772
DQPIELIII	9	Unmodified	_DQPIELIII_					0	0	0			REV__ENST00000394288.7_2_4:129029149-129029425:+|nuORF	REV__ENST00000394288.7_2_4:129029149-129029425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3157226443291	2	527.313158	1052.61176	3.73	0.0019669	1.2186	0.00064258	4.9486	0.0026095	527.3136854224094	90.899	0.60603	92.265	91.929	92.535	1.366					53	18	4	0	0	0	0.037098	1	38244	38244		78.728	0.57865	1	9215900	+		3189	12826	1559	1571	3893	3893					0.08756066934347473
DQRLARRL	8	Unmodified	_DQRLARRL_					0	0	0			REV__ENST00000587013.5_1_19:38882915-38886805:+|nuORF	REV__ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	342.8748351931572	3	343.20883	1026.60466	-0.46291	-0.00015888	-1.0265	-0.0003523	-1.4894	-0.00051118	343.20854862078704	37.507	0.3259	38.791	38.693	39.019	1.284					23	15	2	0	0	0	2.3239	1	15728	15728		1.6526	0	1	2662300	+		3190	14034	1560	1572	3894	3894					0.0924219189712403
DQRLFFFW	8	Unmodified	_DQRLFFFW_					0	0	0			REV__chr7:39695681-39696685|86|13.66|0.57|4.58|+|1|TE_info:AluJr,AluJr_dup30466,Alu,SINE,donor,-,39695403,39695681|None,RALA|1	REV__chr7:39695681-39696685|86|13.66|0.57|4.58|+|1|TE_info:AluJr,AluJr_dup30466,Alu,SINE,donor,-,39695403,39695681|None,RALA|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.7885009646416	2	579.790184	1157.56581	2.0138	0.0011676	1.6641	0.00096482	3.6779	0.0021324	579.7904361684766	71.22	0.76072	72.561	72.392	73.153	1.3415					30	24	2	0	0	0	0.86113	1	29846	29846		15.847	1.9411	1	1097700	+		3191	8337	1561	1573	3895	3895					-0.006665334572289794
DQRLFFFW	8	Unmodified	_DQRLFFFW_					0	0	0			REV__chr7:39695681-39696685|86|13.66|0.57|4.58|+|1|TE_info:AluJr,AluJr_dup30466,Alu,SINE,donor,-,39695403,39695681|None,RALA|1	REV__chr7:39695681-39696685|86|13.66|0.57|4.58|+|1|TE_info:AluJr,AluJr_dup30466,Alu,SINE,donor,-,39695403,39695681|None,RALA|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	579.7885009646416	2	579.790184	1157.56581	2.727	0.0015811	-0.35162	-0.00020386	2.3753	0.0013772	579.7908347122446	70.945	0.67612	72.287	71.924	72.601	1.3415					32	21	2	0	0	0	2.3239	1	29846	29846		15.847	1.9411	1	1242100	+		3192	8337	1561	1573	3896	3896					-0.006665334572289794
DQVANSAFVER	11	Unmodified	_DQVANSAFVER_					0	0	0		ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3062011599541	2	618.304384	1234.59421	0.84323	0.00052137	1.2601	0.00077915	2.1034	0.0013005	618.3049670435131	22.157	0.18188	23.334	23.231	23.413	1.177					13	5	3	0	0	0	0.19145	1	9267	9267		40.714	23.272	1	601990			3193	1010;7159	1562	1574	3897	3897					-0.0136988033864327
DQVANSAFVER	11	Unmodified	_DQVANSAFVER_					0	0	0		ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3042480349541	2	618.304384	1234.59421	0.20886	0.00012914	-1.701	-0.0010518	-1.4922	-0.00092261	618.303369821087	21.797	0.1956	23.413	23.322	23.518	1.6158					14	6	3	0	0	0	0.20152	1	9103	9103		39.923	17.187	1	729340			3194	1010;7159	1562	1574	3898	3898					-0.0136988033864327
DRAYPIYSL	9	Unmodified	_DRAYPIYSL_					0	0	0			REV__ENST00000487841.5_1_6:166733707-166736391:-|nuORF	REV__ENST00000487841.5_1_6:166733707-166736391:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2794067263603	2	549.284931	1096.55531	2.5413	0.0013959	-0.34458	-0.00018927	2.1967	0.0012066	549.2844911968464	47.544	0.55635	49.52	49.187	49.743	1.976					33	17	3	0	0	0	0.35391	1	19813	19813		22.736	0	1	10148000	+		3195	11740	1563	1575	3899	3899					0.010894390976545765
DRCIKRIEEE	10	Unmodified	_DRCIKRIEEE_					0	0	0			REV__ENST00000461731.5_1_2:220094544-220099084:+|nuORF	REV__ENST00000461731.5_1_2:220094544-220099084:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889953494072	3	430.887205	1289.63978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.238	1	53.634	53.134	54.134	1.3966								0	0	0	0.66218	1	21868	21868		0.77653	0	1		+		3196	10688	1564	1576	3900	3900					0.006550218521169882
DRCPCRHFRL	10	Unmodified	_DRCPCRHFRL_					0	0	0			REV__ENST00000380770.3_1_19:10397831-10398857:+|nuORF	REV__ENST00000380770.3_1_19:10397831-10398857:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8836242556572	3	434.881731	1301.62336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.515	1	56.515	56.015	57.015	0								0	0	0	0.66222	1	23566	23566		0.69767	0.07084	1		+		3197	12764	1565	1577	3901	3901					-0.015383377949774513
DRDCEAADR	9	Unmodified	_DRDCEAADR_					0	0	0		nc|ENSG00000176406|Q9UQ26-1|RIMS2;nc|ENSG00000176406|Q9UQ26-8|RIMS2;nc|ENSG00000176406|Q9UQ26|RIMS2;ENSG00000176406|ENST00000696799|RIMS2	nc|ENSG00000176406|Q9UQ26-1|RIMS2	nc|ENSG00000176406|Q9UQ26-1|RIMS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7148315310478	2	525.717087	1049.41962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.489	1	22.666	22.166	23.166	1.177								0	0	0	0.42693	1	8973	8973		5.2969	0	1				3198	4408	1566	1578	3902	3902					-0.10311203755486531
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.1957580447197	3	428.194803	1281.56258	0.35933	0.00015386	1.9122	0.0008188	2.2716	0.00097267	428.19562174855054	25.918	0.48815	25.918	25.718	26.206	0					37	15	3	0	0	0	0.072652	1	10798	10798		53.798	39.58	1	2151000			3199	3217	1567	1579	3903	3903					-0.0669387309258127
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.7894775271416	2	641.788566	1281.56258	1.3781	0.00088447	-0.11457	-7.3529E-05	1.2636	0.00081094	641.7882854010795	25.94	0.36883	25.94	25.748	26.117	0					26	11	3	0	0	0	0.20739	2	10802	10802;10851		48.073	30.96	1	1766100			3200	3217	1567	1579	3904;3905	3904					-0.0669387309258127
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.7888671755791	2	641.788566	1281.56258	0.79455	0.00050994	0.068223	4.3785E-05	0.86278	0.00055372	641.7894886651608	25.565	0.21478	25.817	25.675	25.889	0.25197					15	6	3	0	0	0	0.55892	1	10672	10672		24.882	7.7687	1	726150			3201	3217	1567	1579	3906	3906					-0.0669387309258127
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	428.194803	1281.56258	1.231	0.00052709	-0.88013	-0.00037687	0.35083	0.00015022	428.1941197976383	25.553	0.30765	25.805	25.675	25.982	0.25197	-4.8925E-05	-0.00093917	NaN	53.798	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	944060			3202	3217	1567	1579							-0.0669387309258127
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	428.194803	1281.56258	1.4537	0.00062245	-1.1241	-0.00048133	0.32957	0.00014112	428.1941803269005	24.488	0.21397	25.729	25.609	25.823	1.241	-0.075963	-0.0012526	NaN	53.798	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	423790			3203	3217	1567	1579							-0.0669387309258127
DREDDPNFFK	10	Unmodified	_DREDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	428.194803	1281.56258	0.61391	0.00026287	-2.7299	-0.0011689	-2.116	-0.00090604	428.193632251849	24.083	0.15294	25.768	25.722	25.875	1.6845	-0.036993	-0.0033153	NaN	53.798	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211930			3204	3217	1567	1579							-0.0669387309258127
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1519653201103	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.887	1	86.483	85.983	86.983	1.5962								0	0	0	1.0178	1	35608	35608		1.6526	0	1		+		3205	12916	1568	1580	3907	3907					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1513854861259	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.988	1	86.584	86.084	87.084	1.5962								0	0	0	1.0178	1	35662	35662		1.6526	0	1		+		3206	12916	1568	1580	3908	3908					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1508666872978	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.101	1	86.697	86.197	87.197	1.5962								0	0	0	1.0178	1	35724	35724		1.6526	0	1		+		3207	12916	1568	1580	3909	3909					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1510192751884	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.192	1	86.788	86.288	87.288	1.5962								0	0	0	1.0178	1	35776	35776		1.6526	0	1		+		3208	12916	1568	1580	3910	3910					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1511718630791	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.32	1	86.917	86.417	87.417	1.5962								0	0	0	1.0178	1	35844	35844		1.6526	0	1		+		3209	12916	1568	1580	3911	3911					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1511413455009	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.443	1	86.99	86.49	87.49	1.547								0	0	0	1.0178	1	35910	35910		1.6526	0	1		+		3210	12916	1568	1580	3912	3912					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1509887576103	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.563	1	87.11	86.61	87.61	1.547								0	0	0	1.0178	1	35975	35975		1.6526	0	1		+		3211	12916	1568	1580	3913	3913					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1510803103447	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.725	1	87.272	86.772	87.772	1.547								0	0	0	1.0178	1	36064	36064		1.6526	0	1		+		3212	12916	1568	1580	3914	3914					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1511413455009	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.824	1	87.371	86.871	87.871	1.547								0	0	0	1.0178	1	36118	36118		1.6526	0	1		+		3213	12916	1568	1580	3915	3915					-0.06482013599008951
DRGWQGWS	8	Unmodified	_DRGWQGWS_					0	0	0			REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	REV__ENST00000409645.5_1_2:135211141-135211372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1508056521416	3	331.150869	990.430778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.943	1	87.49	86.99	87.99	1.547								0	0	0	1.0178	1	36183	36183		1.6526	0	1		+		3214	12916	1568	1580	3916	3916					-0.06482013599008951
DRHEPVAVVF	10	Unmodified	_DRHEPVAVVF_					0	0	0			REV__ENSG00000158006|ENST00000374282|PAFAH2	REV__ENSG00000158006|ENST00000374282|PAFAH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.8160888552666	2	584.809105	1167.60366	3.4867	0.002039	-2.7611	-0.0016147	0.72558	0.00042433	584.805370591712	73.836	0.71967	75.154	74.623	75.342	1.318					69	22	4	0	0	0	0.83797	1	30830	30830		8.1555	1.4324	1	6107000	+		3215	10543	1569	1581	3917	3917					0.026559327375707653
DRHYGDHH	8	Unmodified	_DRHYGDHH_					0	0	0			REV__ENSG00000136709|ENST00000322313|WDR33	REV__ENSG00000136709|ENST00000322313|WDR33	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1493102908134	3	346.14964	1035.42709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.034	1	34.331	33.831	34.831	0.29701								0	0	0	1.0178	1	14291	14291		1.8442	0	1		+		3216	9988	1570	1582	3918	3918					-0.08920683372866733
DRIKKLYRKHF	11	Unmodified	_DRIKKLYRKHF_					0	0	0			REV__ENSG00000105397|ENST00000525621|TYK2	REV__ENSG00000105397|ENST00000525621|TYK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	501.9702941775322	3	501.96841	1502.8834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.343	1	91.533	91.033	92.033	0.19042								0	0	0	0.63775	1	38262	38262		0.094841	0	1		+		3217	9171	1571	1583	3919	3919					0.1520747407912495
DRISEFDPG	9	Unmodified	_DRISEFDPG_					0	0	0			REV__ENSG00000109944|ENST00000227349|JHY	REV__ENSG00000109944|ENST00000227349|JHY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2413207888603	2	518.240721	1034.46689	2.8475	0.0014757	-2.2405	-0.0011611	0.60701	0.00031458	518.2397681704961	75.054	2.7506	76.836	76.195	78.945	1.7817					227	87	6	0	0	0	0.53525	1	31622	31622		13.906	0.39817	1	7905300	+		3218	9288	1572	1584	3920	3920					-0.04896601212817586
DRKKHLIEEE	10	Unmodified	_DRKKHLIEEE_					0	0	0			REV__SMC1B|p.L479Cfs*64|1|0.84|ENSG00000077935|chr22:45393729-45393744|ATTCACTTCTAATAAG/-|frameshift_variant	REV__SMC1B|p.L479Cfs*64|1|0.84|ENSG00000077935|chr22:45393729-45393744|ATTCACTTCTAATAAG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	324.7074767947197	4	324.928117	1295.68336	-1.9175	-0.00062306	-0.15924	-5.174E-05	-2.0768	-0.0006748	324.9280620109592	45.358	0.98073	45.358	45.059	46.04	0					68	30	3	0	0	0	0.12543	1	18994	18994		5.0475	0.85802	1	980620	+		3219	8782	1573	1585	3921	3921					0.047349546209488835
DRKKRERKFYW	11	Unmodified	_DRKKRERKFYW_					0	0	0		ENST00000394507.5_2_7:91870378-91871424:-|nuORF	ENST00000394507.5_2_7:91870378-91871424:-|nuORF	ENST00000394507.5_2_7:91870378-91871424:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	806.4445068240166	2	806.446966	1610.87938	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.958	1	98.185	97.685	98.685	0.22776								0	0	0	0.63775	1	41226	41226		0.30703	0	1				3220	6282	1574	1586	3922	3922					0.0983738458546668
DRLFRSPSFLK	11	Unmodified	_DRLFRSPSFLK_					0	0	0			REV__ENST00000560108.5_2_15:34470139-34502204:-|nuORF	REV__ENST00000560108.5_2_15:34470139-34502204:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	683.4317504763603	2	683.385511	1364.75647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.685	1	98.912	98.412	99.412	0.22776								0	0	0	0.63772	1	41548	41548		9.544	4.2471	1		+		3221	13893	1575	1587	3923	3923					0.08868128134167819
DRLLAALA	8	Unmodified	_DRLLAALA_					0	0	0			REV__nc|ENSG00000102024|P13797-3|PLS3	REV__nc|ENSG00000102024|P13797-3|PLS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	842.5112792849541	1	842.509429	841.502152	3.0449	0.0025654	-0.23744	-0.00020004	2.8075	0.0023653	842.5085594637908	104.43	0.091354	104.61	104.56	104.65	0.1731					13	4	4	0	0	0	0.89051	1	44186	44186		2.3027	0	1	52748000	+		3222	9057	1576	1588	3924	3924					0.07506106105643084
DRLLKGRAQV	10	Unmodified	_DRLLKGRAQV_					0	0	0		nc|ENSG00000105479|Q96M63-5|ODAD1;ENST00000474199.5_1_19:48800699-48823634:-|nuORF;nc|ENSG00000105479|Q96M63|ODAD1;ENSG00000105479|ENST00000674294|ODAD1	nc|ENSG00000105479|Q96M63-5|ODAD1	nc|ENSG00000105479|Q96M63-5|ODAD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	578.3533203005791	2	578.351471	1154.68839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.39	1	104.39	103.89	104.89	0								0	0	0	0.6607	1	44041	44041		3.2813	0.70383	1				3223	1519	1577	1589	3925	3925					0.11723303274152386
DRLLSIIKQLP	11	Unmodified	_DRLLSIIKQLP_					0	0	0		tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	324.2021057009697	4	324.706594	1294.79727	1.1269	0.00036592	2.7494	0.00089274	3.8763	0.0012587	324.70770157767845	44.495	0.9731	44.822	44.277	45.25	0.32674					72	32	3	0	0	0	0.14606	1	18514	18514		0.40827	0	1	1507700			3224	16097	1578	1590	3926	3926					0.16166469453787613
DRLLSIIKQLP	11	Unmodified	_DRLLSIIKQLP_					0	0	0		tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	324.9592162966728	4	324.706594	1294.79727	0.40352	0.00013103	3.2378	0.0010513	3.6413	0.0011824	324.70767693725145	43.12	0.92008	44.474	43.935	44.855	1.3536					53	29	3	0	0	0	0.9945	1	18057	18057		4.1166	2.3744	1	2063200			3225	16097	1578	1590	3927	3927					0.16166469453787613
DRNQYALLLI	10	Unmodified	_DRNQYALLLI_					0	0	0		nc|ENSG00000175497|Q8N608-4|DPP10;nc|ENSG00000175497|Q8N608-2|DPP10;ENSG00000175497|ENST00000410059|DPP10;nc|ENSG00000175497|Q8N608-3|DPP10	nc|ENSG00000175497|Q8N608-4|DPP10	nc|ENSG00000175497|Q8N608-4|DPP10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.8473388552666	2	609.845687	1217.67682	3.1695	0.0019329	1.426	0.00086962	4.5955	0.0028025	609.8454565390382	74.602	0.45468	75.908	75.728	76.182	1.3063					21	14	3	0	0	0	0.76954	1	31328	31328		15.248	0	1	1109600			3226	4376	1579	1591	3928	3928					0.07669061460183002
DRPSVKFSFTL	11	Unmodified	_DRPSVKFSFTL_					0	0	0			REV__ENST00000490860.1_1_21:40764845-40768862:+|nuORF	REV__ENST00000490860.1_1_21:40764845-40768862:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	325.6055480837822	4	324.929123	1295.68739	-1.9497	-0.00063352	-2.5085	-0.0008151	-4.4583	-0.0014486	324.9280090597683	44.587	0.58781	44.587	44.472	45.059	0					37	18	3	0	0	0	0.14606	1	18658	18658		2.6312	0.19645	1	1189900	+		3227	13426	1580	1592	3929	3929					0.05137044114621858
DRRRILSV	8	Unmodified	_DRRRILSV_					0	0	0		HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|32|2|sense	HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|32|2|sense	HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|32|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1014.625170886517	1	1014.61669	1013.60941	0.87369	0.00088646	-2.8744	-0.0029164	-2.0007	-0.0020299	1014.6138084300393	83.944	0.20308	85.131	85.05	85.253	1.1879					11	6	2	0	0	0	0.60362	2	35222	35222;35269		39.957	11.47	1	6687900			3228	7626	1581	1593	3930;3931	3930					0.10315076039910309
DRSNVKALI	9	Unmodified	_DRSNVKALI_					0	0	0			REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3009216189384	2	508.298373	1014.58219	3.8957	0.0019802	1.4817	0.00075317	5.3775	0.0027334	508.2991338214867	90.682	0.35343	92.048	91.864	92.217	1.366					17	10	2	0	0	0	0.68551	1	38236	38236		7.9102	2.6795	1	942270	+		3229	12252	1582	1594	3932	3932					0.07548547708859132
DRSNVKALI	9	Unmodified	_DRSNVKALI_					0	0	0			REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	508.298373	1014.58219	4.4918	0.0022832	0.93954	0.00047757	5.4313	0.0027607	508.2991123184769	91.041	0.38338	92.023	91.812	92.196	0.98157	0.03941	0.00028004	NaN	7.9102	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1270800	+		3230	12252	1582	1594							0.07548547708859132
DRSNVKALI	9	Unmodified	_DRSNVKALI_					0	0	0			REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	REV__ENST00000280377.9_1_12:62784999-62785134:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	508.298373	1014.58219	3.8957	0.0019802	1.4817	0.00075317	5.3775	0.0027334	508.2991338214867	90.682	0.35343	92.048	91.864	92.217	1.366	0.064019	0.00083125	NaN	7.9102	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	942270	+		3231	12252	1582	1594							0.07548547708859132
DRSRRGRL	8	Unmodified	_DRSRRGRL_					0	0	0			REV__chr10:42638553-42644993|422|16.99|0.0|20.7|-|0|TE_info:AluSc,AluSc_dup20667,Alu,SINE,donor,-,42644993,42645058|ZNF33B,None|1	REV__chr10:42638553-42644993|422|16.99|0.0|20.7|-|0|TE_info:AluSc,AluSc_dup20667,Alu,SINE,donor,-,42644993,42645058|ZNF33B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3005859255791	2	508.29703	1014.57951	4.4918	0.0022832	3.5811	0.0018202	8.0728	0.0041034	508.2991123184769	91.041	0.38338	92.023	91.812	92.196	0.98157					19	11	2	0	0	0	0.88587	1	38356	38356		5.2307	0	1	1270800	+		3232	8231	1583	1595	3933	3933					0.07280137094574002
DRTPLHWAAIK	11	Unmodified	_DRTPLHWAAIK_					0	0	0		ENSG00000230062|ENST00000565422|ANKRD66	ENSG00000230062|ENST00000565422|ANKRD66	ENSG00000230062|ENST00000565422|ANKRD66	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.3649780154228	2	654.364579	1306.7146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.509	1	51.486	50.986	51.986	1.9772								0	0	0	0.63774	1	20738	20738		8.1555	0.54658	1				3233	5303	1584	1596	3934	3934					0.07351572445622878
DRTRLTPV	8	Unmodified	_DRTRLTPV_					0	0	0			REV__ENST00000392025.5_1_19:41081471-41081663:+|nuORF	REV__ENST00000392025.5_1_19:41081471-41081663:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2784606814384	2	479.277441	956.540328	2.5713	0.0012324	-0.92607	-0.00044385	1.6453	0.00078854	479.27720759044763	79.452	0.75487	79.753	79.217	79.972	0.30046					45	23	3	0	0	0	0.89051	1	33247	33247		2.3027	0	1	1958700	+		3234	12795	1585	1597	3935	3935					0.06031992020302823
DRVIPYWN	8	Unmodified	_DRVIPYWN_					0	0	0		tr|A0A7D6ZZP3|A0A7D6ZZP3_9CLOT2,3-bisphosphoglycerate-dependentphosphoglyceratemutaseOS=ClostridiumintestinaleOX=36845GN=gpmAPE=3SV=1	tr|A0A7D6ZZP3|A0A7D6ZZP3_9CLOT2,3-bisphosphoglycerate-dependentphosphoglyceratemutaseOS=ClostridiumintestinaleOX=36845GN=gpmAPE=3SV=1	tr|A0A7D6ZZP3|A0A7D6ZZP3_9CLOT2,3-bisphosphoglycerate-dependentphosphoglyceratemutaseOS=ClostridiumintestinaleOX=36845GN=gpmAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699035525322	3	354.85042	1061.52943	-1.5714	-0.00055762	2.8106	0.00099736	1.2392	0.00043974	354.8511794678597	29.438	0.36732	29.438	29.241	29.608	0					23	11	3	0	0	0	2.3239	1	12300	12300		2.9952	0.49676	1	1769100			3235	17212	1586	1598	3936	3936					0.0011258964602802735
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	349.5178100466728	3	349.518781	1045.53451	-1.479	-0.00051693	-0.0038996	-1.363E-06	-1.4829	-0.00051829	349.5187933909997	35.161	0.82218	35.161	34.806	35.628	0					133	61	4	0	0	0	0.49909	7	14680	14639;14680;14718;14755;14795;14842;14883		47.749	25.732	1	84858000			3236	28	1587	1599	3937;3938;3939;3940;3941;3942;3943	3938					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.7737304568291	2	523.774534	1045.53451	1.6844	0.00088225	-1.6855	-0.00088281	-0.0010569	-5.5356E-07	523.7736381460804	35.154	0.95504	35.154	34.837	35.792	0					138	70	4	0	0	0	0.052859	7	14676	14676;14719;14760;14798;14836;14888;14986		115.69	69.671	1	71611000			3237	28	1587	1599	3944;3945;3946;3947;3948;3949;3950	3944					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	349.5176574587822	3	349.518781	1045.53451	-1.4144	-0.00049435	0.77256	0.00027002	-0.64182	-0.00022433	349.85353400325073	36.713	0.47741	36.713	36.656	37.134	0					32	23	2	0	0	0	0.84677	3	15419	15419;15474;15516		17.113	4.9381	1	1757500			3238	28	1587	1599	3951;3952;3953	3951					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.5186950564384	3	349.518781	1045.53451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.71	1	35.71	35.21	36.21	0								0	0	0	1.0178	1	14970	14970		26.268	11.311	1				3239	28	1587	1599	3954	3954					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	349.8531066775322	3	349.518781	1045.53451	-1.4509	-0.00050711	0.15352	5.3659E-05	-1.2973	-0.00045345	349.5189305381032	35.909	0.1316	35.909	35.847	35.979	0					14	10	2	0	0	0	2.3239	1	15040	15040		26.268	12.653	1	3619100			3240	28	1587	1599	3955	3955					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	349.5188476443291	3	349.518781	1045.53451	1.002	0.00035022	-0.80072	-0.00027987	0.20129	7.0354E-05	349.51847013570136	34.585	0.63706	34.885	34.602	35.239	0.29942					87	30	4	0	0	0	0.55655	5	14562	14472;14515;14562;14606;14650		43.772	28.815	1	25603000			3241	28	1587	1599	3956;3957;3958;3959;3960	3958					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.7751342654228	2	523.774534	1045.53451	1.5474	0.00081048	-0.41	-0.00021475	1.1374	0.00059574	523.7742396779929	34.609	0.60623	34.909	34.632	35.239	0.29942					79	29	4	0	0	0	0.052859	4	14538	14492;14538;14587;14631		112.59	60.325	1	16088000			3242	28	1587	1599	3961;3962;3963;3964	3962					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.5183593630791	3	349.518781	1045.53451	-0.74749	-0.00026126	-0.93689	-0.00032746	-1.6844	-0.00058873	349.5184719962351	33.328	0.47629	34.606	34.355	34.831	1.2782					94	34	4	0	0	0	0.67508	4	13984	13942;13984;14024;14073		32.786	17.537	1	99461000			3243	28	1587	1599	3965;3966;3967;3968	3966					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7742187380791	2	523.774534	1045.53451	0.59092	0.00030951	-0.76908	-0.00040282	-0.17816	-9.3315E-05	523.7741696000776	33.343	0.43956	34.621	34.383	34.823	1.2782					92	32	4	0	0	0	0.155	3	14013	13971;14013;14051		88.904	45.045	1	131760000			3244	28	1587	1599	3969;3970;3971	3970					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.5179931521416	3	349.518781	1045.53451	0.38519	0.00013463	-1.7493	-0.00061142	-1.3641	-0.00047679	349.5181867977354	32.835	0.37278	34.66	34.423	34.796	1.8246					54	24	3	0	0	0	0.70442	2	13796	13757;13796		29.841	11.467	1	19911000			3245	28	1587	1599	3972;3973	3973					0.013568935086595957
DRVYIHPF	8	Unmodified	_DRVYIHPF_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7742797732353	2	523.774534	1045.53451	0.82299	0.00043106	0.60496	0.00031686	1.4279	0.00074792	523.7750773080224	32.819	0.33576	34.643	34.461	34.796	1.8246					57	22	4	0	0	0	0.62137	1	13787	13787		37.974	5.857	1	12025000			3246	28	1587	1599	3974	3974					0.013568935086595957
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	648.8468505740166	2	648.846022	1295.67749	2.0414	0.0013246	0.037521	2.4345E-05	2.0789	0.0013489	648.8454653015232	42.165	0.49859	42.165	41.949	42.447	0					36	15	3	0	0	0	0.27627	1	17645	17645		46.022	6.0726	1	1956000			3247	28	1588	1600	3975	3975					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.9263793826103	4	324.926649	1295.67749	-2.0164	-0.00065519	2.7536	0.00089471	0.73716	0.00023952	324.92728657336994	42.795	2.0849	42.795	42.447	44.532	0					128	66	4	0	0	0	0.44353	6	17839	17839;17882;17933;17986;18074;18154		30.703	16.298	1	4031400			3248	28	1588	1600	3976;3977;3978;3979;3980;3981	3976					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9024230837822	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.973	1	41.973	41.473	42.473	0								0	0	0	0.031129	1	17567	17567		48.561	7.836	1				3249	28	1588	1600	3982	3982					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9005920290947	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.095	1	42.095	41.595	42.595	0								0	0	0	0.014941	1	17618	17618		55.467	16.908	1				3250	28	1588	1600	3983	3983					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9008666872978	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.218	1	42.218	41.718	42.718	0								0	0	0	0.031129	1	17670	17670		48.561	11.486	1				3251	28	1588	1600	3984	3984					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9010803103447	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.309	1	42.309	41.809	42.809	0								0	0	0	0.014941	1	17707	17707		55.467	18.392	1				3252	28	1588	1600	3985	3985					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9018127322197	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.403	1	42.403	41.903	42.903	0								0	0	0	0.2428	1	17746	17746		35.996	5.2924	1				3253	28	1588	1600	3986	3986					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9021179080009	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.498	1	42.498	41.998	42.998	0								0	0	0	0.014941	1	17786	17786		55.467	19.855	1				3254	28	1588	1600	3987	3987					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9023010134697	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.597	1	42.597	42.097	43.097	0								0	0	0	0.031129	1	17827	17827		48.561	11.486	1				3255	28	1588	1600	3988	3988					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9016906619072	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.717	1	42.717	42.217	43.217	0								0	0	0	0.12025	1	17878	17878		42.068	6.4556	1				3256	28	1588	1600	3989	3989					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9017822146416	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.837	1	42.837	42.337	43.337	0								0	0	0	0.031129	1	17929	17929		48.561	12.949	1				3257	28	1588	1600	3990	3990					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9016906619072	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.957	1	42.957	42.457	43.457	0								0	0	0	0.014941	1	17981	17981		55.467	19.855	1				3258	28	1588	1600	3991	3991					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9019042849541	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.079	1	43.079	42.579	43.579	0								0	0	0	0.031129	1	18034	18034		48.561	11.486	1				3259	28	1588	1600	3992	3992					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9026061892509	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.201	1	43.201	42.701	43.701	0								0	0	0	0.014941	1	18086	18086		55.467	18.392	1				3260	28	1588	1600	3993	3993					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9036743044853	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.322	1	43.322	42.822	43.822	0								0	0	0	0.031129	1	18137	18137		48.561	6.2484	1				3261	28	1588	1600	3994	3994					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9034606814384	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.415	1	43.415	42.915	43.915	0								0	0	0	0.12025	1	18176	18176		42.068	4.9932	1				3262	28	1588	1600	3995	3995					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9001647830009	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.311	1	44.311	43.811	44.811	0								0	0	0	0.12025	1	18542	18542		42.068	11.364	1				3263	28	1588	1600	3996	3996					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9004699587822	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.436	1	44.436	43.936	44.936	0								0	0	0	0.12025	1	18595	18595		42.068	4.9932	1				3264	28	1588	1600	3997	3997					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	432.9018432497978	3	432.899773	1295.67749	2.1447	0.00092846	1.4746	0.00063835	3.6193	0.0015668	432.90102069089374	41.674	0.90968	41.991	41.569	42.479	0.31683					106	30	5	0	0	0	0.07468	5	17465	17427;17465;17504;17543;17582		68.484	29.925	1	26450000			3265	28	1588	1600	3998;3999;4000;4001;4002	3999					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	324.9274169802666	4	324.926649	1295.67749	1.1132	0.0003617	1.028	0.00033403	2.1412	0.00069572	324.92683768773236	41.699	0.91217	42.016	41.627	42.539	0.31683					76	30	4	0	0	0	0.38475	2	17468	17468;17517		34.222	16.779	1	8200800			3266	28	1588	1600	4003;4004	4003					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	324.2022582888603	4	324.926649	1295.67749	1.1432	0.00037146	0.55083	0.00017898	1.694	0.00055044	324.926549942821	42.49	0.79952	42.811	42.374	43.173	0.32058					47	26	3	0	0	0	0.12557	1	17862	17862		0.62683	0	1	1474800			3267	28	1588	1600	4005	4005					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9028198122978	3	432.899773	1295.67749	2.4516	0.0010613	-1.5219	-0.00065881	0.92973	0.00040248	432.8994498381875	39.729	1.0103	41.039	40.715	41.725	1.3102					109	33	5	0	0	0	0.07468	6	16593	16593;16638;16677;16716;16773;16828		68.484	29.925	1	284060000			3268	28	1588	1600	4006;4007;4008;4009;4010;4011	4006					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	324.9272643923759	4	324.926649	1295.67749	1.0663	0.00034647	-0.39162	-0.00012725	0.67469	0.00021923	324.92653431620727	39.697	0.97852	41.007	40.746	41.725	1.3102					93	32	5	0	0	0	0.27609	4	16605	16605;16651;16690;16729		40.725	23.676	1	74951000			3269	28	1588	1600	4012;4013;4014;4015	4012					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.8461791872978	2	648.846022	1295.67749	2.001	0.0012984	-1.567	-0.0010168	0.43403	0.00028162	648.8451159095463	39.697	0.39217	41.007	40.846	41.238	1.3102					33	12	4	0	0	0	0.047049	2	16665	16623;16665		107.1	65.005	1	8483000			3270	28	1588	1600	4016;4017	4017					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	324.9272949099541	4	324.926649	1295.67749	1.0499	0.00034113	0.69753	0.00022665	1.7474	0.00056778	324.92682607675584	41.025	1.3258	42.351	41.74	43.066	1.3254					120	41	4	0	0	0	0.48563	7	17185	17054;17133;17185;17235;17291;17354;17430		28.234	14.619	1	5841500			3271	28	1588	1600	4018;4019;4020;4021;4022;4023;4024	4020					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	324.9266540408134	4	324.926649	1295.67749	0.77246	0.00025099	0.5583	0.00018141	1.3308	0.0004324	324.9266121755092	41.762	0.80875	43.087	42.811	43.62	1.3254					60	25	3	0	0	0	0.48563	2	17550	17496;17550		28.234	14.619	1	2899400			3272	28	1588	1600	4025;4026	4026					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	324.9269897341728	4	324.926649	1295.67749	0.47078	0.00015297	1.4656	0.00047621	1.9364	0.00062918	324.92705121347495	42.822	0.8207	44.161	43.634	44.455	1.3399					63	25	3	0	0	0	0.74074	1	17990	17990		16.566	11.163	1	2259200			3273	28	1588	1600	4027	4027					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9020263552666	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.723	1	42.049	41.549	42.549	1.3254								0	0	0	0.0042786	1	17080	17080		62.78	24.221	1				3274	28	1588	1600	4028	4028					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9021179080009	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.844	1	42.17	41.67	42.67	1.3254								0	0	0	0.031129	1	17130	17130		48.561	12.949	1				3275	28	1588	1600	4029	4029					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9019958376884	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.966	1	42.291	41.791	42.791	1.3254								0	0	0	0.031129	1	17180	17180		48.561	12.949	1				3276	28	1588	1600	4030	4030					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9017211794853	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.062	1	42.388	41.888	42.888	1.3254								0	0	0	0.12025	1	17220	17220		42.068	4.9932	1				3277	28	1588	1600	4031	4031					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9016906619072	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.156	1	42.482	41.982	42.982	1.3254								0	0	0	0.014941	1	17259	17259		55.467	13.155	1				3278	28	1588	1600	4032	4032					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9022094607353	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.25	1	42.576	42.076	43.076	1.3254								0	0	0	0.12025	1	17298	17298		42.068	6.4556	1				3279	28	1588	1600	4033	4033					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9003478884697	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.477	1	42.802	42.302	43.302	1.3254								0	0	0	0.031129	1	17390	17390		48.561	12.949	1				3280	28	1588	1600	4034	4034					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9038574099541	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.569	1	42.894	42.394	43.394	1.3254								0	0	0	0.031129	1	17427	17427		48.561	11.486	1				3281	28	1588	1600	4035	4035					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9025756716728	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.667	1	42.992	42.492	43.492	1.3254								0	0	0	0.031129	1	17467	17467		48.561	10.002	1				3282	28	1588	1600	4036	4036					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9030029177666	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.883	1	43.223	42.723	43.723	1.3399								0	0	0	0.12025	1	17560	17560		42.068	6.4556	1				3283	28	1588	1600	4037	4037					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9005615115166	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.566	1	44.92	44.42	45.42	1.3536								0	0	0	0.12025	1	18266	18266		42.068	8.2465	1				3284	28	1588	1600	4038	4038					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9003173708916	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.71	1	45.064	44.564	45.564	1.3536								0	0	0	0.45095	1	18327	18327		27.129	4.1132	1				3285	28	1588	1600	4039	4039					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.8992187380791	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.863	1	45.217	44.717	45.717	1.3536								0	0	0	0.1348	1	18391	18391		41.347	12.066	1				3286	28	1588	1600	4040	4040					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.8997985720634	3	432.899773	1295.67749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.63	1	45.996	45.496	46.496	1.3653								0	0	0	0.20696	1	18707	18707		37.771	12.814	1				3287	28	1588	1600	4041	4041					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	324.9592162966728	4	324.926649	1295.67749	0.42352	0.00013761	0.45195	0.00014685	0.87546	0.00028446	324.9269143547596	43.121	0.32955	44.475	44.376	44.705	1.3536					15	10	2	0	0	0	0.12535	1	18057	18057		6.1918	3.5606	1	1204800			3288	28	1588	1600	4042	4042					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	325.2938415408134	4	324.926649	1295.67749	1.8968	0.00061633	0.98621	0.00032045	2.883	0.00093677	324.9267891024525	112.95	0.19373	113.12	113.04	113.23	0.16914					7	5	2	0	0	0	0.12549	1	48978	48978		1.7423	0	1	486930			3289	28	1588	1600	4043	4043					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.9010803103447	3	432.899773	1295.67749	1.5797	0.00068384	0.49907	0.00021605	2.0787	0.00089989	432.90023579439526	39.257	0.77197	41.094	40.817	41.589	1.8366					75	24	5	0	0	0	0.07468	3	16454	16406;16454;16493		68.484	23.539	1	25361000			3290	28	1588	1600	4044;4045;4046	4045					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	324.9269897341728	4	324.926649	1295.67749	0.9104	0.00029581	0.28887	9.3862E-05	1.1993	0.00038967	324.92663379151054	39.245	0.58892	41.082	40.848	41.437	1.8366					50	18	4	0	0	0	0.48563	3	16456	16407;16456;16497		28.234	14.566	1	9918700			3291	28	1588	1600	4047;4048;4049	4048					0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	324.926649	1295.67749	-2.5907	-0.00084179	7.2062	0.0023415	4.6155	0.0014997	325.17996203464105	112.88	0.35921	112.88	112.81	113.17	0	-0.11957	0.0014144	NaN	1.7423	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419170			3292	28	1588	1600							0.041479008998976497
DRVYIHPFHL	10	Unmodified	_DRVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	648.846022	1295.67749	2.004	0.0013003	3.4972	0.0022691	5.5012	0.0035694	648.8490782176293	40.97	0.25219	42.295	42.084	42.336	1.3255	0.1448	0.003187	NaN	46.022	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370550			3293	28	1588	1600							0.041479008998976497
DRYPWKRF	8	Unmodified	_DRYPWKRF_					0	0	0		GTPBP10|p.R64W|1|0.19|ENSG00000105793|chr7:90352972-90352972|C/T|missense_variant	GTPBP10|p.R64W|1|0.19|ENSG00000105793|chr7:90352972-90352972|C/T|missense_variant	GTPBP10|p.R64W|1|0.19|ENSG00000105793|chr7:90352972-90352972|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3077270388603	2	584.306532	1166.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.334	1	43.674	43.174	44.174	1.3399								0	0	0	1.0178	1	17747	17747		2.8892	0	1				3294	7593	1589	1601	4050	4050					0.021876736655940476
DRYVALFVK	9	Unmodified	_DRYVALFVK_					0	0	0			REV__ENST00000312143.11_1_12:108687417-108732857:-|nuORF	REV__ENST00000312143.11_1_12:108687417-108732857:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8195068240166	2	555.818941	1109.62333	1.489	0.00082764	-0.78183	-0.00043456	0.70721	0.00039308	555.8183403840424	47.823	0.28357	47.823	47.653	47.936	0					13	8	2	0	0	0	0.57699	1	19987	19987		12.241	0	1	656840	+		3295	12370	1590	1602	4051	4051					0.07290308748292773
DSARNCNDR	9	Unmodified	_DSARNCNDR_					0	0	0			REV__ENST00000371432.7_1_6:45515222-45515519:+|nuORF	REV__ENST00000371432.7_1_6:45515222-45515519:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	525.2278320193291	2	525.722704	1049.43085	1.0382	0.00054582	-0.98516	-0.00051792	0.053068	2.7899E-05	525.7232878887855	25.169	0.15373	25.421	25.335	25.489	0.25197					6	4	2	0	0	0	0.11799	1	10526	10526		5.7319	1.7875	1	208190	+		3296	12670	1591	1603	4052	4052					-0.09188381661329004
DSDCFCSDGDV	11	Unmodified	_DSDCFCSDGDV_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1274902224541	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.371	1	14.484	13.984	14.984	0.11295								0	0	0	0.63775	1	5962	5962		0.094841	0.094841	1		+		3297	10211	1592	1604	4053	4053					-0.21517101920699133
DSDCFCSDGDV	11	Unmodified	_DSDCFCSDGDV_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1275207400322	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.611	1	23.844	23.344	24.344	0.23306								0	0	0	0.63775	1	9846	9846		0.094841	0	1		+		3298	10211	1592	1604	4054	4054					-0.21517101920699133
DSDCFCSDGDV	11	Unmodified	_DSDCFCSDGDV_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1270019412041	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3041	1	9.9547	9.4547	10.455	0.65058								0	0	0	0.63775	1	3865	3865		0.094841	0.011491	1		+		3299	10211	1592	1604	4055	4055					-0.21517101920699133
DSDCFCSDGDV	11	Unmodified	_DSDCFCSDGDV_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1272460818291	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.909	1	23.086	22.586	23.586	1.177								0	0	0	0.63775	1	9153	9153		0.094841	0.094841	1		+		3300	10211	1592	1604	4056	4056					-0.21517101920699133
DSDCFCSDGDV	11	Unmodified	_DSDCFCSDGDV_					0	0	0			REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	REV__nc|ENSG00000143409|Q8N5J2-2|MINDY1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276428103447	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.281	1	23.897	23.397	24.397	1.6158								0	0	0	0.63775	1	9297	9297		0.094841	0	1		+		3301	10211	1592	1604	4057	4057					-0.21517101920699133
DSGRKLQEI	9	Unmodified	_DSGRKLQEI_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.569873034954	1	1045.56365	1044.55637	3.2021	0.003348	2.4932	0.0026068	5.6953	0.0059548	1045.5667192695546	74.288	0.51163	75.606	75.405	75.917	1.318					47	16	4	0	0	0	0.10473	1	31234	31234		47.749	3.8904	1	11690000	+		3302	8774	1593	1605	4058	4058					0.03587653466570373
DSHKQWYISF	10	Unmodified	_DSHKQWYISF_					0	0	0			REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.8136474490166	2	655.811845	1309.60914	2.2628	0.001484	1.7509	0.0011483	4.0138	0.0026323	655.8129071480957	59.218	0.52313	60.638	60.467	60.99	1.4196					34	16	3	0	0	0	0.38174	1	24889	24889		34.402	9.4108	1	1977200	+		3303	14634	1594	1606	4059	4059					-0.03328388470640675
DSHKQWYISF	10	Unmodified	_DSHKQWYISF_					0	0	0			REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.8143188357353	2	655.811845	1309.60914	2.2135	0.0014516	2.3198	0.0015214	4.5333	0.002973	655.8137449145598	58.728	0.46305	60.697	60.574	61.037	1.969					31	14	3	0	0	0	0.21003	1	24655	24655		47.749	5.9091	1	1939900	+		3304	14634	1594	1606	4060	4060					-0.03328388470640675
DSHKQWYISF	10	Unmodified	_DSHKQWYISF_					0	0	0			REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	655.811845	1309.60914	2.2628	0.001484	1.7509	0.0011483	4.0138	0.0026323	655.8129071480957	59.218	0.52313	60.638	60.467	60.99	1.4196	-0.029424	-0.00034005	NaN	47.749	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1977200	+		3305	14634	1594	1606							-0.03328388470640675
DSHKQWYISF	10	Unmodified	_DSHKQWYISF_					0	0	0			REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	REV__sp|P16731|UL88_HCMVAProteinUL88OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL88PE=1SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	655.811845	1309.60914	2.2135	0.0014516	2.3198	0.0015214	4.5333	0.002973	655.8137449145598	58.728	0.46305	60.697	60.574	61.037	1.969	0.029424	0.00040616	NaN	47.749	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1939900	+		3306	14634	1594	1606							-0.03328388470640675
DSIIVLVYWG	10	Unmodified	_DSIIVLVYWG_					0	0	0			REV__MCOLN2|p.F420Vfs*15|1|0.17|ENSG00000153898|chr1:84937832-84937833|-/CCTTCCTCATCAACTTTCTTTAC|frameshift_variant	REV__MCOLN2|p.F420Vfs*15|1|0.17|ENSG00000153898|chr1:84937832-84937833|-/CCTTCCTCATCAACTTTCTTTAC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8207885622978	2	582.818607	1163.62266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.611	1	43.935	43.435	44.435	0.32389								0	0	0	0.66008	1	18309	18309		4.3292	0.38484	1		+		3307	10457	1595	1607	4061	4061					0.047394693086062034
DSLFFVHSN	9	Unmodified	_DSLFFVHSN_					0	0	0		ENST00000458394.1_1_9:123606782-123606953:+|nuORF	ENST00000458394.1_1_9:123606782-123606953:+|nuORF	ENST00000458394.1_1_9:123606782-123606953:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0695678591728	3	355.83818	1064.49271	0.92718	0.00032992	0.96477	0.0003433	1.8919	0.00067323	356.17249503116227	71.378	0.29732	72.719	72.482	72.779	1.3415					19	9	3	0	0	0	0.11938	1	29946	29946		1.1933	0	1	614520			3308	6656	1596	1608	4062	4062					-0.036957069705067624
DSPDGDQDVN	10	Unmodified	_DSPDGDQDVN_					0	0	0			REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2053710818291	2	531.204532	1060.39451	3.1068	0.0016503	-1.4233	-0.00075606	1.6835	0.00089429	531.2036451400904	65.028	0.46995	66.427	66.193	66.663	1.3989					50	14	4	0	0	0	0.83797	1	27288	27288		8.1555	0.24537	1	10176000	+		3309	11959	1597	1609	4063	4063					-0.13326980077044936
DSSQELPDP	9	Unmodified	_DSSQELPDP_					0	0	0			REV__RSPH4A|p.S265Mfs*9|1|0.04|ENSG00000111834|chr6:116622874-116622875|-/TGTTATTGGATAGGTATGATTG|frameshift_variant	REV__RSPH4A|p.S265Mfs*9|1|0.04|ENSG00000111834|chr6:116622874-116622875|-/TGTTATTGGATAGGTATGATTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2155944705009	2	494.216911	986.41927	0.12235	6.0466E-05	-1.3102	-0.00064752	-1.1879	-0.00058706	494.2163429394539	4.3074	0.34798	4.3074	4.2062	4.5542	0					24	15	2	0	0	0	0.83753	1	1729	1729		1.8442	1.0506	1	537830	+		3310	9344	1598	1610	4064	4064					-0.07448300203657254
DSTMDCFV	8	Unmodified	_DSTMDCFV_					0	0	0			REV__nc|ENSG00000041982|P24821-6|TNC	REV__nc|ENSG00000041982|P24821-6|TNC	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1732665896416	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.328	1	70.198	69.698	70.698	1.87								0	0	0	1.0178	1	28667	28667		2.8892	0.31174	1		+		3311	8597	1599	1611	4065	4065					-0.13085755039321612
DSWDMYNVGE	10	Unmodified	_DSWDMYNVGE_					0	0	0		USP4|p.E90Ifs*22|1|0.08|ENSG00000114316|chr3:49327778-49327779|-/TGCAGGACATTAGCTAT|frameshift_variant;USP4|p.E144Rfs*9|1|0.05|ENSG00000114316|chr3:49325776-49325776|C/-|frameshift_variant;nc|ENSG00000114316|Q13107-3|USP4;USP4|p.E907Gfs*5|1|0.11|ENSG00000114316|chr3:49278827-49278828|-/AC|frameshift_variant;nc|ENSG00000114316|Q13107-2|USP4;ENSG00000114316|ENST00000265560|USP4	USP4|p.E90Ifs*22|1|0.08|ENSG00000114316|chr3:49327778-49327779|-/TGCAGGACATTAGCTAT|frameshift_variant	USP4|p.E90Ifs*22|1|0.08|ENSG00000114316|chr3:49327778-49327779|-/TGCAGGACATTAGCTAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5370056033134	4	304.621027	1214.455	-2.7584	-0.00084026	-0.56074	-0.00017081	-3.3191	-0.0010111	304.8719460582845	29.453	1.0141	29.453	29.055	30.069	0					47	32	2	0	0	0	0.12561	1	12330	12330		0.13989	0	1	1356300			3312	1857	1600	1612	4066	4066					-0.14364586018336922
DSYVGDEAQSK	11	Unmodified	_DSYVGDEAQSK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000436287.1_1_1:224052226-224052508:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7662231326103	2	599.764757	1197.51496	-0.095276	-5.7143E-05	1.1692	0.00070127	1.074	0.00064413	599.7653464520575	12.892	0.25153	13.619	13.473	13.725	0.72639					23	7	4	0	0	0	0.0054879	2	5331	5331;5383		111.31	76.907	1	5861900			3313	937	1601	1613	4067;4068	4067					-0.0758957208342963
DSYVGDEAQSK	11	Unmodified	_DSYVGDEAQSK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000436287.1_1_1:224052226-224052508:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.7639037966728	2	599.764757	1197.51496	0.16716	0.00010026	0.34281	0.00020561	0.50997	0.00030586	599.7648168723878	12.686	0.2427	13.473	13.362	13.605	0.78751					24	7	4	0	0	0	0.016723	2	5245	5245;5294		101.54	73.915	1	7564900			3314	937	1601	1613	4069;4070	4069					-0.0758957208342963
DTANLIMVL	9	Unmodified	_DTANLIMVL_					0	0	0			REV__ENSG00000134757|ENST00000257189|DSG3	REV__ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2730590701103	2	495.270435	988.526318	2.9328	0.0014525	0.084208	4.1706E-05	3.017	0.0014942	495.27034446422124	61.702	0.24968	63.12	62.988	63.238	1.4177					10	7	2	0	0	0	0.49082	1	25894	25894		15.847	0	1	507840	+		3315	9916	1602	1614	4071	4071					0.03159578477038849
DTANLIMVL	9	Unmodified	_DTANLIMVL_					0	0	0			REV__ENSG00000134757|ENST00000257189|DSG3	REV__ENSG00000134757|ENST00000257189|DSG3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.270435	988.526318	2.9328	0.0014525	0.084208	4.1706E-05	3.017	0.0014942	495.27034446422124	61.702	0.24968	63.12	62.988	63.238	1.4177	-0.035963	-0.00060026	NaN	15.847	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507840	+		3316	9916	1602	1614							0.03159578477038849
DTANLIMVL	9	Unmodified	_DTANLIMVL_					0	0	0			REV__ENSG00000134757|ENST00000257189|DSG3	REV__ENSG00000134757|ENST00000257189|DSG3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	495.270435	988.526318	2.3304	0.0011542	0.98152	0.00048612	3.3119	0.0016403	495.2707200637022	61.227	0.24536	63.192	63.004	63.25	1.9653	0.035963	0.00028857	NaN	15.847	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557380	+		3317	9916	1602	1614							0.03159578477038849
DTAVERTMAST	11	Unmodified	_DTAVERTMAST_					0	0	0			REV__ENST00000595897.5_1_19:42407837-42410617:+|nuORF	REV__ENST00000595897.5_1_19:42407837-42410617:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1181.546191394329	1	1181.54668	1180.5394	3.9278	0.0046409	-3.2025	-0.0037839	0.72534	0.00085703	1181.5423627970151	104.64	0.077744	104.7	104.65	104.72	0.056801					8	3	3	0	0	0	1.0366	1	44185	44185		1.1933	0.12188	1	28285000	+		3318	8772	1603	1615	4072	4072					-0.043646352015457524
DTCFRMQINH	10	Unmodified	_DTCFRMQINH_					0	0	0		ENST00000549820.1_1_12:113344820-113354315:+|nuORF;nc|ENSG00000089127|P00973-4|OAS1;nc|ENSG00000089127|P00973-2|OAS1;ENSG00000089127|ENST00000202917|OAS1;nc|ENSG00000089127|P00973-3|OAS1	ENST00000549820.1_1_12:113344820-113354315:+|nuORF	ENST00000549820.1_1_12:113344820-113354315:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	422.2268554568291	3	422.19023	1263.54886	-0.45046	-0.00019018	-2.6722	-0.0011282	-3.1227	-0.0013184	422.18943182071246	11.752	0.15273	11.752	11.635	11.788	0					10	4	3	0	0	0	0.12532	1	4870	4870		1.9064	0	1	1066300			3319	1119	1604	1616	4073	4073					-0.07237145396993583
DTDPDFVVSL	10	Unmodified	_DTDPDFVVSL_					0	0	0		ENST00000479994.1_1_3:121377041-121379717:-|nuORF	ENST00000479994.1_1_3:121377041-121379717:-|nuORF	ENST00000479994.1_1_3:121377041-121379717:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.8578979372978	2	554.263862	1106.51317	1.0596	0.00058728	-1.7592	-0.00097507	-0.69965	-0.00038779	554.2617026768136	80.137	0.30151	81.854	81.663	81.964	1.7167					12	9	2	0	0	0	0.1245	1	33652	33652		3.5965	0	1	720870			3320	6815	1605	1617	4074	4074					-0.03582581101386495
DTFKPRHNREK	11	Unmodified	_DTFKPRHNREK_					0	0	0			REV__ENSG00000080224|ENST00000389672|EPHA6	REV__ENSG00000080224|ENST00000389672|EPHA6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1993286013603	3	476.588258	1426.74294	0.16999	8.1015E-05	0.20442	9.7425E-05	0.37441	0.00017844	476.5884676990986	11.411	0.15653	12.172	12.037	12.193	0.76165					12	4	4	0	0	0	0.14606	1	4744	4744		0.40827	0	1	1074400	+		3321	8805	1606	1618	4075	4075					0.04664270354942346
DTHYDEMHREL	11	Unmodified	_DTHYDEMHREL_					0	0	0			REV__ENST00000483189.1_1_13:111893629-111928079:+|nuORF	REV__ENST00000483189.1_1_13:111893629-111928079:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.5438110232353	3	482.541986	1444.60413	0.59615	0.00028767	2.3355	0.001127	2.9317	0.0014147	482.5436120102163	11.499	0.64648	11.499	11.171	11.818	0					47	20	5	0	0	0	0.50855	1	4742	4742		14.838	8.2144	1	6308900	+		3322	9077	1607	1619	4076	4076					-0.10039060395547494
DTKKLQLLG	9	Unmodified	_DTKKLQLLG_					0	0	0			REV__ENST00000428265.5_1_2:204103762-204143319:+|nuORF	REV__ENST00000428265.5_1_2:204103762-204143319:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.3125182986259	2	508.310949	1014.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.5	1	103.5	103	104	0								0	0	0	0.42693	1	43458	43458		1.8442	0	1		+		3323	13010	1608	1620	4077	4077					0.10062602511447949
DTLAELVQL	9	Unmodified	_DTLAELVQL_					0	0	0			REV__tr|A0A553SFR2|A0A553SFR2_NIACIDamage-inducibleproteinDinBOS=NialliacirculansOX=1397GN=CEQ21_09345PE=3SV=1	REV__tr|A0A553SFR2|A0A553SFR2_NIACIDamage-inducibleproteinDinBOS=NialliacirculansOX=1397GN=CEQ21_09345PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1001.553454577923	1	1001.55135	1000.54408	2.0654	0.0020686	-0.69578	-0.00069686	1.3696	0.0013717	1001.5505729374164	63.096	0.25314	63.096	62.987	63.24	0					12	7	2	0	0	0	0.042029	1	26319	26319		74.423	10.186	1	660690	+		3324	14715	1609	1621	4078	4078					0.04382617003534506
DTLTPLIKK	9	Unmodified	_DTLTPLIKK_					0	0	0		nc|ENSG00000186462|Q9ULW6-2|NAP1L2;ENSG00000186462|ENST00000373517|NAP1L2	nc|ENSG00000186462|Q9ULW6-2|NAP1L2	nc|ENSG00000186462|Q9ULW6-2|NAP1L2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.2885619997978	2	514.82115	1027.62775	2.437	0.0012546	1.5689	0.00080771	4.0059	0.0020623	514.8222624403254	76.73	0.31754	78.498	78.353	78.671	1.7672					13	9	2	0	0	0	0.10844	1	32189	32189		11.64	0	1	791060			3325	4790	1610	1622	4079	4079					0.11503773171239118
DTMVQYILF	9	Unmodified	_DTMVQYILF_					0	0	0			REV__ENSG00000164128|ENST00000296533|NPY1R	REV__ENSG00000164128|ENST00000296533|NPY1R	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2844116091728	2	565.283543	1128.55253	1.8609	0.0010519	0.25998	0.00014696	2.1209	0.0011989	565.2837495264466	83.793	0.4322	85.431	85.221	85.653	1.6379					38	13	4	0	0	0	0.081597	1	35207	35207		61.357	0.96792	1	11558000	+		3326	10720	1611	1623	4080	4080					-0.0066015235152008245
DTRQELAEM	9	Unmodified	_DTRQELAEM_					0	0	0		nc|ENSG00000292995|Q17RH7|TPRXL	nc|ENSG00000292995|Q17RH7|TPRXL	nc|ENSG00000292995|Q17RH7|TPRXL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7538329958916	2	546.753138	1091.49172	2.3303	0.0012741	0.105	5.7408E-05	2.4353	0.0013315	546.7531590908412	75.572	0.64516	76.878	76.435	77.08	1.3063					59	20	4	0	0	0	0.079895	1	31712	31712		56.177	4.5472	1	5995900			3327	8024	1612	1624	4081	4081					-0.05036289401732574
DTVAAVLK	8	Unmodified	_DTVAAVLK_					0	0	0		ENSG00000167543|ENST00000301057|TP53I13	ENSG00000167543|ENST00000301057|TP53I13	ENSG00000167543|ENST00000301057|TP53I13	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.7462341189384	2	408.744911	815.475269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.806	1	29.582	29.082	30.082	1.7754								0	0	0	1.0178	1	11639	11639		16.942	4.4107	1				3328	3973	1613	1625	4082	4082					0.06014997494480667
DVAFGIVSL	9	Unmodified	_DVAFGIVSL_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	920.5095703005791	1	920.50876	919.501483	1.8327	0.001687	0.057064	5.2528E-05	1.8898	0.0017395	920.5085367588991	93.301	0.31742	93.301	93.138	93.455	0					19	9	3	0	0	0	0.10993	2	39020	38973;39020		46.021	3.9264	1	1061400	+		3329	10175	1614	1626	4083;4084	4084					0.038512666659471506
DVAFGIVSL	9	Unmodified	_DVAFGIVSL_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	920.5147582888603	1	920.50876	919.501483	2.7255	0.0025088	-1.3836	-0.0012736	1.3419	0.0012353	920.5078391926343	92.992	0.32432	93.161	92.964	93.289	0.16835					13	9	2	0	0	0	0.059546	2	38910	38910;38961		64.236	3.8468	1	881160	+		3330	10175	1614	1626	4085;4086	4085					0.038512666659471506
DVAFGIVSL	9	Unmodified	_DVAFGIVSL_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	920.50876	919.501483	1.8327	0.001687	0.057064	5.2528E-05	1.8898	0.0017395	920.5085367588991	93.301	0.31742	93.301	93.138	93.455	0	0.10392	-0.00025047	NaN	64.236	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1061400	+		3331	10175	1614	1626							0.038512666659471506
DVAFGIVSL	9	Unmodified	_DVAFGIVSL_					0	0	0			REV__ENSG00000142319|ENST00000270349|SLC6A3	REV__ENSG00000142319|ENST00000270349|SLC6A3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	920.50876	919.501483	2.7255	0.0025088	-1.3836	-0.0012736	1.3419	0.0012353	920.5078391926343	92.992	0.32432	93.161	92.964	93.289	0.16835	-0.036925	-0.0015766	NaN	64.236	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881160	+		3332	10175	1614	1626							0.038512666659471506
DVDFWRTL	8	Unmodified	_DVDFWRTL_					0	0	0			REV__tr|A0A7D6VS95|A0A7D6VS95_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15195PE=4SV=1	REV__tr|A0A7D6VS95|A0A7D6VS95_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2659789919853	2	526.263999	1050.51345	2.6899	0.0014156	1.2583	0.00066221	3.9482	0.0020778	526.2644846522858	44.931	0.37708	46.296	46.056	46.433	1.3653					17	11	2	0	0	0	0.87803	1	18850	18850		10.183	2.2732	1	867290	+		3333	15436	1615	1627	4087	4087					-0.0097911659086094
DVEKGIVKEM	10	Unmodified	_DVEKGIVKEM_					0	0	0			REV__tr|A0A553SUM5|A0A553SUM5_NIACILTAsynthasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_03075PE=3SV=1	REV__tr|A0A553SUM5|A0A553SUM5_NIACILTAsynthasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_03075PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3055908083916	2	574.305007	1146.59546	1.133	0.00065071	-3.11	-0.0017861	-1.9769	-0.0011354	574.3043068133304	53.702	0.36629	55.102	54.92	55.286	1.4005					58	14	5	0	0	0	0.79268	1	22529	22529		13.042	0	1	40455000	+		3334	15297	1616	1628	4088	4088					0.028026177059246038
DVEKGIVKEM	10	Unmodified	_DVEKGIVKEM_					0	0	0			REV__tr|A0A553SUM5|A0A553SUM5_NIACILTAsynthasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_03075PE=3SV=1	REV__tr|A0A553SUM5|A0A553SUM5_NIACILTAsynthasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_03075PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3039428591728	2	574.305007	1146.59546	0.72722	0.00041764	-2.6429	-0.0015179	-1.9157	-0.0011002	574.3047113323406	53.221	0.40179	55.191	54.986	55.387	1.9697					68	17	5	0	0	0	0.70618	2	22236	22236;22324		18.146	1.0335	1	34212000	+		3335	15297	1616	1628	4089;4090	4089					0.028026177059246038
DVENHYNL	8	Unmodified	_DVENHYNL_					0	0	0			REV__nc|ENSG00000111726|Q8NFW8-2|CMAS	REV__nc|ENSG00000111726|Q8NFW8-2|CMAS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2300903201103	2	502.227613	1002.44067	4.2902	0.0021547	0.004795	2.4082E-06	4.295	0.0021571	502.2274478184022	94.38	0.33906	95.121	94.919	95.258	0.74124					17	10	2	0	0	0	0.89008	1	39764	39764		2.5775	0	1	1263400	+		3336	9340	1617	1629	4091	4091					-0.06044870384289425
DVFFKRRKHRY	11	Unmodified	_DVFFKRRKHRY_					0	0	0			REV__ENST00000510885.2_1_4:57459440-57459704:+|nuORF	REV__ENST00000510885.2_1_4:57459440-57459704:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6268188357353	3	517.960026	1550.85825	2.7711	0.0014353	-1.5609	-0.00080849	1.2102	0.00062684	517.958966068612	88.241	1.687	88.475	88.163	89.85	0.23471					91	52	2	0	0	0	0.14606	1	36913	36913		1.2148	0.70888	1	825980	+		3337	13569	1618	1630	4092	4092					0.10485419276596986
DVGPRKEH	8	Unmodified	_DVGPRKEH_					0	0	0		ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	469.7787963747978	2	469.246141	936.477728	3.0095	0.0014122	1.1011	0.00051669	4.1105	0.0019289	469.24684214249646	76.16	0.45355	76.482	76.24	76.694	0.32163					36	14	3	0	0	0	2.3239	1	31813	31813		7.9102	0	1	6427000			3338	5880	1619	1631	4093	4093					0.006948459521481709
DVGPRKEH	8	Unmodified	_DVGPRKEH_					0	0	0		ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	ENST00000328257.12_1_11:73882258-73914820:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	469.7799560427666	2	469.246141	936.477728	3.133	0.0014702	3.4581	0.0016227	6.5911	0.0030929	469.2479250073288	74.863	0.40208	76.645	76.481	76.884	1.7817					31	12	3	0	0	0	2.3239	1	31396	31396		7.9102	0	1	2585900			3339	5880	1619	1631	4094	4094					0.006948459521481709
DVHGPDWHL	9	Unmodified	_DVHGPDWHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant;AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.1694518923759	3	359.170041	1074.48829	-0.87885	-0.00031566	-0.387	-0.000139	-1.2659	-0.00045466	359.16998206511767	35.175	0.24686	36.449	36.316	36.563	1.2746					50	23	3	0	0	0	0.1052	2	14740	14740;14781		47.594	26.057	1	5844500			3340	30	1620	1632	4095;4096	4095					-0.04597171393447752
DVHGPDWHL	9	Unmodified	_DVHGPDWHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant;AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	359.1691772341728	3	359.170041	1074.48829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.68	1	36.498	35.998	36.998	1.8176								0	0	0	0.053101	1	14540	14540		43.772	30.916	1				3341	30	1620	1632	4097	4097					-0.04597171393447752
DVHGPDWNL	9	Unmodified	_DVHGPDWNL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.6251708865166	2	526.743431	1051.47231	1.8837	0.00099221	0.23056	0.00012144	2.1142	0.0011137	526.743850804692	42.637	0.27913	44.558	44.384	44.663	1.9211					15	8	3	0	0	0	0.098208	1	17870	17870		24.021	9.4389	1	1259800			3342	30	1621	1633	4098	4098					-0.051368776303661434
DVHTCKAPKKA	11	Unmodified	_DVHTCKAPKKA_					0	0	0		nc|ENSG00000134245|Q93097-2|WNT2B;ENSG00000134245|ENST00000369684|WNT2B	nc|ENSG00000134245|Q93097-2|WNT2B	nc|ENSG00000134245|Q93097-2|WNT2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3260375857353	2	599.324065	1196.63358	1.8833	0.0011287	0.72388	0.00043384	2.6072	0.0015626	599.324753016895	39.905	0.24751	41.767	41.615	41.862	1.8624					11	7	2	0	0	0	1.0191	1	16747	16747		1.1933	0	1	438840			3343	2601	1622	1634	4099	4099					0.043125484112579215
DVLLIPWKLT	10	Unmodified	_DVLLIPWKLT_					0	0	0		ENST00000430603.1_1_10:30728116-30739489:+|nuORF;nc|ENSG00000107968|P41279-2|MAP3K8;ENSG00000107968|ENST00000263056|MAP3K8	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3678466677666	2	599.365724	1196.7169	3.2944	0.0019745	0.95607	0.00057304	4.2505	0.0025476	599.3659857774549	105.92	0.1023	106.08	106.03	106.13	0.16679					11	4	3	0	0	0	0.88314	1	45176	45176		3.2813	0.28607	1	34385000			3344	1617	1623	1635	4100	4100					0.12640608130755027
DVNAAIATIK	10	Unmodified	_DVNAAIATIK_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2944518923759	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.946	1	33.771	33.271	34.271	1.8246								0	0	0	0.58569	1	13392	13392		21.799	7.3941	1				3345	2190	1624	1636	4101	4101					0.06425725614724342
DVNNVVLIL	9	Unmodified	_DVNNVVLIL_					0	0	0		ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7977783083916	2	499.797675	997.580796	2.5995	0.0012992	-2.9683	-0.0014835	-0.36873	-0.00018429	499.79577003518057	80.463	0.30527	81.714	81.513	81.818	1.2512					16	9	2	0	0	0	0.098163	1	33781	33781		49.933	13.806	1	1813000			3346	2042	1625	1637	4102	4102					0.08190913620103402
DVNNVVLIL	9	Unmodified	_DVNNVVLIL_					0	0	0		ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	ENSG00000118600|ENST00000261234|RXYLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7975036501884	2	499.797675	997.580796	1.0164	0.00050801	-1.6445	-0.0008219	-0.62804	-0.00031389	499.7968214407102	80.021	0.34237	81.737	81.537	81.879	1.7167					21	10	3	0	0	0	0.30098	1	33545	33545		25.399	6.1423	1	1027700			3347	2042	1625	1637	4103	4103					0.08190913620103402
DVPVTEPKCL	10	Unmodified	_DVPVTEPKCL_					0	0	0			REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	551.2687255740166	2	550.78645	1099.55835	1.819	0.0010019	1.5131	0.00083338	3.3321	0.0018353	550.7870920840642	68.489	0.37732	70.353	70.13	70.507	1.8635					17	11	2	0	0	0	0.12493	1	28776	28776		10.824	5.5933	1	1100700	+		3348	9879	1626	1638	4104	4104					0.012549461601565781
DVPVTEPKCL	10	Unmodified	_DVPVTEPKCL_					0	0	0			REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.78645	1099.55835	1.7942	0.00098822	2.7093	0.0014922	4.5035	0.0024805	550.7873830044445	68.968	0.37602	70.334	70.154	70.53	1.3657	-0.0092998	0.00063295	NaN	10.824	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1632200	+		3349	9879	1626	1638							0.012549461601565781
DVQADTTNSA	10	Unmodified	_DVQADTTNSA_					0	0	0			REV__nc|ENSG00000103591|Q6PD74-2|AAGAB	REV__nc|ENSG00000103591|Q6PD74-2|AAGAB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	511.2645141482353	2	511.225268	1020.43598	2.1792	0.0011141	-1.7532	-0.0008963	0.42595	0.00021776	511.2247206730131	65.144	0.56004	67.052	66.627	67.187	1.9085					25	17	2	0	0	0	0.12399	1	27339	27339		22.736	4.6013	1	1270200	+		3350	9114	1627	1639	4105	4105					-0.07341799317714504
DVRRVIKLWDK	11	Unmodified	_DVRRVIKLWDK_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MSMS	GG20161007_CRH_Patient100_A02_02	2	714.4312621951103	2	714.42771	1426.84087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.48	1	101.55	101.05	102.05	0.067009								0	0	0	0.63775	1	42490	42490		1.1933	0.84271	1		+		3351	11389	1628	1640	4106	4106					0.14452078950921532
DVSLALFLI	9	Unmodified	_DVSLALFLI_					0	0	0		ENST00000569153.1_1_16:64294558-64295142:-|nuORF	ENST00000569153.1_1_16:64294558-64295142:-|nuORF	ENST00000569153.1_1_16:64294558-64295142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7964050173759	2	495.797143	989.579734	2.1107	0.0010465	-2.9885	-0.0014817	-0.8778	-0.00043521	495.7955026591229	68.87	0.4398	69.193	68.998	69.438	0.32224					32	13	3	0	0	0	0.44535	1	28790	28790		18.135	1.1927	1	3381800			3352	7379	1629	1641	4107	4107					0.0845269925117691
DVSSCQIPHF	10	Unmodified	_DVSSCQIPHF_					0	0	0		ENST00000328194.7_2_11:9160490-9160769:-|nuORF	ENST00000328194.7_2_11:9160490-9160769:-|nuORF	ENST00000328194.7_2_11:9160490-9160769:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	378.5625793337822	3	378.174574	1131.50189	1.3985	0.00052889	-0.99816	-0.00037748	0.40038	0.00015142	378.1735704939034	39.559	0.42887	41.421	41.186	41.615	1.8624					28	13	3	0	0	0	0.12438	1	16651	16651		6.6304	0	1	1628400			3353	5879	1630	1642	4108	4108					-0.058596816765202675
DVVKRQKGKH	10	Unmodified	_DVVKRQKGKH_					0	0	0			REV__ENSG00000188729|ENST00000682035|OSTN	REV__ENSG00000188729|ENST00000682035|OSTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8577758669853	2	597.856921	1193.69929	2.285	0.0013661	-0.20279	-0.00012124	2.0822	0.0012448	597.8564739538344	75.581	0.80588	75.902	75.678	76.484	0.32164					58	25	3	0	0	0	0.89803	1	31649	31649		1.6526	0.17072	1	1165200	+		3354	11581	1631	1643	4109	4109					0.11018705648461946
DVWTRCRRLRY	11	Unmodified	_DVWTRCRRLRY_					0	0	0		ENST00000457997.1_1_13:19435671-19446003:-|nuORF	ENST00000457997.1_1_13:19435671-19446003:-|nuORF	ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1523.559741199017	1	1523.80121	1522.79393	2.1706	0.0033076	-3.6742	-0.0055987	-1.5035	-0.0022911	1523.7984107673306	27.564	0.35013	27.835	27.709	28.059	0.27119					14	11	2	0	0	0	0.14606	1	11527	11527		0.35063	0.043601	1	2223400			3355	6653	1632	1644	4110	4110					0.05344896128144683
DVYQTSITI	9	Unmodified	_DVYQTSITI_					0	0	0		tr|A0A553SJR8|A0A553SJR8_NIACIpullulanaseOS=NialliacirculansOX=1397GN=pulAPE=4SV=1	tr|A0A553SJR8|A0A553SJR8_NIACIpullulanaseOS=NialliacirculansOX=1397GN=pulAPE=4SV=1	tr|A0A553SJR8|A0A553SJR8_NIACIpullulanaseOS=NialliacirculansOX=1397GN=pulAPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1039.932055652142	1	1039.53062	1038.52334	0.85756	0.00089146	2.5669	0.0026684	3.4245	0.0035598	1039.532432373288	58.633	0.19192	60.051	59.972	60.164	1.4181					8	5	2	0	0	0	0.065136	1	24619	24619		34.402	0	1	1826600			3356	16260	1633	1645	4111	4111					0.005620266238793192
DWCWCYNCFR	10	Unmodified	_DWCWCYNCFR_					0	0	0			REV__ENSG00000165091|ENST00000297784|TMC1	REV__ENSG00000165091|ENST00000297784|TMC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.2506591677666	2	698.25701	1394.49947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.508	1	21.508	21.008	22.008	0								0	0	0	0.6624	1	8944	8944		0.40072	0	1		+		3357	10765	1634	1646	4112	4112					-0.18200176677510171
DWCWCYNCFR	10	Unmodified	_DWCWCYNCFR_					0	0	0			REV__ENSG00000165091|ENST00000297784|TMC1	REV__ENSG00000165091|ENST00000297784|TMC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.2615234255791	2	698.25701	1394.49947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.278	1	68.278	67.778	68.778	0								0	0	0	0.6624	1	28435	28435		0.40072	0	1		+		3358	10765	1634	1646	4113	4113					-0.18200176677510171
DWCWCYNCFR	10	Unmodified	_DWCWCYNCFR_					0	0	0			REV__ENSG00000165091|ENST00000297784|TMC1	REV__ENSG00000165091|ENST00000297784|TMC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2549316287041	2	698.25701	1394.49947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.094	1	15.207	14.707	15.707	0.11295								0	0	0	0.6624	1	6265	6265		0.40072	0	1		+		3359	10765	1634	1646	4114	4114					-0.18200176677510171
DWCWCYNCFR	10	Unmodified	_DWCWCYNCFR_					0	0	0			REV__ENSG00000165091|ENST00000297784|TMC1	REV__ENSG00000165091|ENST00000297784|TMC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2559692263603	2	698.25701	1394.49947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.885	1	72.21	71.71	72.71	0.32494								0	0	0	0.6624	1	30080	30080		0.40072	0	1		+		3360	10765	1634	1646	4115	4115					-0.18200176677510171
DWCWCYNCFR	10	Unmodified	_DWCWCYNCFR_					0	0	0			REV__ENSG00000165091|ENST00000297784|TMC1	REV__ENSG00000165091|ENST00000297784|TMC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	698.2587768435478	2	698.25701	1394.49947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.694	1	15.463	14.963	15.963	0.76937								0	0	0	0.6624	1	6107	6107		0.40072	0	1		+		3361	10765	1634	1646	4116	4116					-0.18200176677510171
DWCWYDSL	8	Unmodified	_DWCWYDSL_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	543.8054077029228	2	544.213117	1086.41168	2.2586	0.0012292	0.1307	7.1127E-05	2.3893	0.0013003	544.2133084804111	62.978	0.3084	64.923	64.782	65.091	1.9444					11	9	2	0	0	0	2.3239	1	26386	26386		9.3474	2.0582	1	385340	+		3362	11590	1635	1647	4117	4117					-0.12806731004957328
DWDRRMRKQ	9	Unmodified	_DWDRRMRKQ_					0	0	0			REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8888427615166	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.831	1	21.042	20.542	21.542	0.21024								0	0	0	0.42693	1	8652	8652		0.23584	0	1		+		3363	8866	1636	1648	4118	4118					0.007887007315275696
DWEEKRHFR	9	Unmodified	_DWEEKRHFR_					0	0	0		ENSG00000015479|ENST00000394805|MATR3;MATR3-UBE2D2|2|fusion;MATR3-UBE2D2|6|fusion;MATR3-UBE2D2|4|fusion	ENSG00000015479|ENST00000394805|MATR3	ENSG00000015479|ENST00000394805|MATR3	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8831359744072	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2934	1	2.9276	2.4276	3.4276	0.63417								0	0	0	0.42693	1	942	942		0.26902	0	1				3364	599	1637	1649	4119	4119					-0.012230481449705621
DWPRRWRRPKP	11	Unmodified	_DWPRRWRRPKP_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2948486208916	3	517.291887	1548.85383	1.9397	0.0010034	1.3262	0.00068603	3.2659	0.0016894	517.292279860137	42.867	4.0798	43.187	42.758	46.838	0.32058					373	135	5	0	0	0	1.0369	1	18146	18146		1.1098	0.096179	1	20394000	+		3365	12275	1638	1650	4120	4120					0.10135954853672047
DWPRRWRRPKP	11	Unmodified	_DWPRRWRRPKP_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2942382693291	3	517.291887	1548.85383	2.2757	0.0011772	0.29389	0.00015203	2.5696	0.0013292	517.291798434614	41.681	4.8489	43.007	41.771	46.62	1.3254					319	154	4	0	0	0	1.0224	3	17665	17456;17665;17914		2.4348	1.4212	1	12100000	+		3366	12275	1638	1650	4121;4122;4123	4122					0.10135954853672047
DWYFMAYFVS	10	Unmodified	_DWYFMAYFVS_					0	0	0			REV__ENST00000412176.1_1_1:24228945-24229221:-|nuORF	REV__ENST00000412176.1_1_1:24228945-24229221:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	664.7861205935478	2	664.78645	1327.55835	0.20597	0.00013693	-2.5635	-0.0017042	-2.3575	-0.0015673	665.2852962818339	14.413	0.15743	14.526	14.448	14.605	0.11295					8	4	2	0	0	0	0.89803	1	6004	6004		0.40072	0	1	407350	+		3367	12922	1639	1651	4124	4124					-0.092330538398528
DWYLKYITLKT	11	Unmodified	_DWYLKYITLKT_					0	0	0		nc|ENSG00000012779|P09917-5|ALOX5;nc|ENSG00000012779|P09917-4|ALOX5;nc|ENSG00000012779|P09917-2|ALOX5;nc|ENSG00000012779|P09917-3|ALOX5;ENSG00000012779|ENST00000374391|ALOX5	nc|ENSG00000012779|P09917-5|ALOX5	nc|ENSG00000012779|P09917-5|ALOX5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.9357787966728	3	481.934261	1442.78095	0.92363	0.00044513	2.5489	0.0012284	3.4726	0.0016735	481.9353340061947	11.452	0.093454	11.535	11.487	11.581	0.082325					4	2	2	0	0	0	0.9326	1	4756	4756		7.846	0.80896	1	922970			3368	578	1640	1652	4125	4125					0.07727343497026595
DYAELLQHF	9	Unmodified	_DYAELLQHF_					0	0	0		ENSG00000103043|ENST00000261776|VAC14;ENST00000571759.1_1_16:70721833-70722010:-|nuORF;nc|ENSG00000103043|Q08AM6-2|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.2753173708916	2	568.274564	1134.53457	2.0523	0.0011663	-1.0391	-0.00059047	1.0133	0.00057582	568.2741441518513	66.274	0.45336	67.662	67.389	67.843	1.3887					42	14	4	0	0	0	0.01454	2	27826	27775;27826		103.75	44.016	1	6173200			3369	1413	1641	1653	4126;4127	4127					-0.0273115128200061
DYAELLQHF	9	Unmodified	_DYAELLQHF_					0	0	0		ENSG00000103043|ENST00000261776|VAC14;ENST00000571759.1_1_16:70721833-70722010:-|nuORF;nc|ENSG00000103043|Q08AM6-2|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.2747070193291	2	568.274564	1134.53457	1.7798	0.0010114	-0.86408	-0.00049103	0.91569	0.00052036	568.2740967320153	65.809	0.42204	67.717	67.529	67.951	1.9085					39	13	4	0	0	0	0.0066739	2	27625	27579;27625		115.69	54.335	1	5741700			3370	1413	1641	1653	4128;4129	4129					-0.0273115128200061
DYAKVLLLI	9	Unmodified	_DYAKVLLLI_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3264037966728	2	524.326068	1046.63758	2.6705	0.0014002	0.37087	0.00019446	3.0413	0.0015946	524.3251858302394	80.494	0.39882	81.745	81.513	81.912	1.2512					20	12	2	0	0	0	0.075994	1	33769	33769		57.722	9.3761	1	2055400			3371	2335	1642	1654	4130	4130					0.11612961176638237
DYAKVLLLI	9	Unmodified	_DYAKVLLLI_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3267089724541	2	524.326068	1046.63758	1.2499	0.00065535	0.71673	0.0003758	1.9666	0.0010312	524.3260618953127	79.964	0.49617	81.681	81.383	81.879	1.7167					25	15	2	0	0	0	0.1109	1	33522	33522		45.7	15.475	1	1355200			3372	2335	1642	1654	4131	4131					0.11612961176638237
DYATIFNNL	9	Unmodified	_DYATIFNNL_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7627441287041	2	535.761289	1069.50803	2.5969	0.0013913	0.91526	0.00049036	3.5121	0.0018817	535.7614067382389	75.634	0.58662	76.94	76.615	77.202	1.3063					80	18	6	0	0	0	0.026628	5	31694	31652;31694;31733;31772;31819		92.822	32.328	1	36770000			3373	1879	1643	1655	4132;4133;4134;4135;4136	4133					-0.023948401733377978
DYATIFNNL	9	Unmodified	_DYATIFNNL_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1070.518481433392	1	1070.5153	1069.50803	2.8627	0.0030646	-0.22194	-0.00023759	2.6408	0.002827	1070.5146561431202	75.517	0.43321	76.824	76.677	77.11	1.3063					40	13	4	0	0	0	0.002761	3	31679	31679;31722;31766		128.37	35.543	1	6648700			3374	1879	1643	1655	4137;4138;4139	4137					-0.023948401733377978
DYATIFNNL	9	Unmodified	_DYATIFNNL_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7627441287041	2	535.761289	1069.50803	2.9195	0.0015642	0.63965	0.0003427	3.5592	0.0019069	535.7613622739317	75.117	0.61966	76.898	76.668	77.288	1.7817					72	19	5	0	0	0	0.026628	4	31510	31463;31510;31549;31589		92.822	28.985	1	43925000			3375	1879	1643	1655	4140;4141;4142;4143	4141					-0.023948401733377978
DYATIFNNL	9	Unmodified	_DYATIFNNL_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1070.520678699017	1	1070.5153	1069.50803	3.1619	0.0033848	0.89064	0.00095344	4.0525	0.0043383	1070.5148252048293	75.204	0.43546	76.986	76.73	77.166	1.7817					40	13	4	0	0	0	0.0092758	3	31523	31476;31523;31562		108	22.142	1	7643400			3376	1879	1643	1655	4144;4145;4146	4145					-0.023948401733377978
DYAVVLNQL	9	Unmodified	_DYAVVLNQL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.553759753704	1	1034.55169	1033.54441	1.3447	0.0013911	1.2234	0.0012657	2.5681	0.0026569	1034.551913056419	66.249	0.33285	67.638	67.418	67.751	1.3888					23	10	3	0	0	0	0.026836	2	27764	27764;27815		92.491	36.314	1	2728900			3377	669	1644	1656	4147;4148	4147					0.028980367233771176
DYAVVLNQL	9	Unmodified	_DYAVVLNQL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7810546755791	2	517.779482	1033.54441	2.2187	0.0011488	-0.58578	-0.0003033	1.6329	0.00084547	517.7794853146578	66.188	0.45336	67.577	67.389	67.843	1.3887					28	14	3	0	0	0	0.037761	1	27770	27770		78.149	44.047	1	11245000			3378	669	1644	1656	4149	4149					0.028980367233771176
DYAVVLNQL	9	Unmodified	_DYAVVLNQL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1034.557666003704	1	1034.55169	1033.54441	2.5025	0.002589	0.71561	0.00074034	3.2181	0.0033293	1034.552170093259	65.902	0.30498	67.811	67.616	67.921	1.9085					20	9	3	0	0	0	0.04145	2	27619	27619;27669		74.929	33.089	1	1851500			3379	669	1644	1656	4150;4151	4150					0.028980367233771176
DYAVVLNQL	9	Unmodified	_DYAVVLNQL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7807494997978	2	517.779482	1033.54441	1.8955	0.00098145	-0.1985	-0.00010278	1.697	0.00087867	517.779530551668	65.859	0.42247	67.767	67.559	67.982	1.9085					24	13	3	0	0	0	0.037761	2	27662	27620;27662		78.149	44.047	1	11050000			3380	669	1644	1656	4152;4153	4153					0.028980367233771176
DYAYLREHF	9	Unmodified	_DYAYLREHF_					0	0	0		ENST00000565396.5_1_16:2050390-2052694:-|nuORF;nc|ENSG00000167962|Q86UK7-2|ZNF598;nc|ENSG00000167962|Q86UK7-3|ZNF598;nc|ENSG00000167962|Q86UK7|ZNF598;ENSG00000167962|ENST00000562103|ZNF598	ENST00000565396.5_1_16:2050390-2052694:-|nuORF	ENST00000565396.5_1_16:2050390-2052694:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.2108032107353	2	607.285463	1212.55637	1.0103	0.00061353	0.3967	0.00024091	1.407	0.00085444	607.2853365398029	38.2	0.18864	40.02	39.942	40.131	1.8202					7	5	2	0	0	0	0.11684	1	15994	15994		7.9102	3.1541	1	227010			3381	4002	1645	1657	4154	4154					-0.041403465334497014
DYCDSCIV	8	Unmodified	_DYCDSCIV_					0	0	0			REV__ENSG00000198799|ENST00000361127|LRIG2	REV__ENSG00000198799|ENST00000361127|LRIG2	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1725036501884	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.817	1	95.941	95.441	96.441	0.12331								0	0	0	1.0178	1	40102	40102		0.69038	0	1		+		3382	11738	1646	1658	4155	4155					-0.1308575503933298
DYDERYIL	8	Unmodified	_DYDERYIL_					0	0	0		tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7600585818291	2	543.758746	1085.50294	2.6899	0.0014627	-0.72558	-0.00039454	1.9644	0.0010681	543.7583808451707	65.433	0.40234	66.832	66.632	67.034	1.3989					16	12	2	0	0	0	0.66196	1	27437	27437		34.102	9.4286	1	2464500			3383	16830	1647	1659	4156	4156					-0.03639144035946629
DYDERYIL	8	Unmodified	_DYDERYIL_					0	0	0		tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7592651247978	2	543.758746	1085.50294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.155	1	67.064	66.564	67.564	1.9085								0	0	0	1.0178	1	27330	27330		26.884	2.2098	1				3384	16830	1647	1659	4157	4157					-0.03639144035946629
DYDSVFHHL	9	Unmodified	_DYDSVFHHL_					0	0	0		EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant;nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7596923708916	2	566.756538	1131.49852	2.3767	0.001347	0.97857	0.00055461	3.3553	0.0019016	566.7580968477769	40.004	0.24585	41.315	41.207	41.453	1.3102					16	7	3	0	0	0	0.11478	1	16764	16764		44.407	27.465	1	1508000			3385	2111	1648	1660	4158	4158					-0.06196608458844821
DYDSVFHHL	9	Unmodified	_DYDSVFHHL_					0	0	0		EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant;nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	378.5627624392509	3	378.173451	1131.49852	1.4929	0.00056459	2.406	0.00090989	3.899	0.0014745	378.1739373544522	39.985	0.33511	41.296	41.148	41.483	1.3102					29	10	4	0	0	0	0.10306	1	16770	16770		24.021	13.87	1	1876000			3386	2111	1648	1660	4159	4159					-0.06196608458844821
DYDSVFHHL	9	Unmodified	_DYDSVFHHL_					0	0	0		EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant;nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32573515-32573971:-|nuORF	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	567.3427612185478	2	566.756538	1131.49852	1.6982	0.00096245	0.86117	0.00048807	2.5593	0.0014505	566.7573043165443	39.606	0.33697	41.469	41.278	41.615	1.8624					18	10	2	0	0	0	0.040432	1	16588	16588		50.855	39.215	1	911740			3387	2111	1648	1660	4160	4160					-0.06196608458844821
DYEEETEDY	9	Unmodified	_DYEEETEDY_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;ENST00000466992.1_1_6:109871214-109940313:-|nuORF	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.1465942263603	3	398.143663	1191.40916	4.048	0.0016117	1.8996	0.00075632	5.9476	0.002368	398.1441601529232	87.473	0.27703	88.565	88.366	88.643	1.0918					14	8	2	0	0	0	0.77526	1	36891	36891		2.4985	0	1	1268700			3388	3407	1649	1661	4161	4161					-0.1788895271954516
DYEEETEDY	9	Unmodified	_DYEEETEDY_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;ENST00000466992.1_1_6:109871214-109940313:-|nuORF	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	398.143663	1191.40916	4.5145	0.0017974	1.4298	0.00056927	5.9443	0.0023667	398.47856948294253	87.138	0.30952	88.633	88.456	88.766	1.4953	0.034413	-0.00022809	NaN	2.4985	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508750			3389	3407	1649	1661							-0.1788895271954516
DYFRKSIFL	9	Unmodified	_DYFRKSIFL_					0	0	0		ENST00000497613.2_1_8:145668058-145668220:-|nuORF;nc|ENSG00000160949|Q96HA7-2|TONSL;ENSG00000160949|ENST00000409379|TONSL	ENST00000497613.2_1_8:145668058-145668220:-|nuORF	ENST00000497613.2_1_8:145668058-145668220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.8853942751884	3	396.885241	1187.63389	1.3043	0.00051768	1.0552	0.00041879	2.3595	0.00093647	396.8854435348823	66.828	0.41051	68.217	67.996	68.407	1.3888					31	12	3	0	0	0	0.69306	1	28007	28007		7.609	0.50723	1	1817300			3390	3582	1650	1662	4162	4162					0.047582914027543666
DYGDLYTLQ	9	Unmodified	_DYGDLYTLQ_					0	0	0			REV__ENST00000486769.1_1_9:100760930-100767440:+|nuORF	REV__ENST00000486769.1_1_9:100760930-100767440:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2523376345634	3	363.169595	1086.48696	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.3	109.8	110.8	0.16133								0	0	0	0.42693	1	47854	47854		0.23584	0	1		+		3391	10004	1651	1663	4163	4163					-0.052828502728289095
DYGDRFWDI	9	Unmodified	_DYGDRFWDI_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|4|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|3|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|1|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|2|intron;ENST00000461880.5_1_6:31847863-31852380:-|nuORF;ENST00000494816.5_1_6:31847863-31852859:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.7632324099541	2	593.76182	1185.50909	2.7647	0.0016416	-1.655	-0.00098265	1.1097	0.00065891	593.7611334379285	63.278	0.40411	64.692	64.471	64.876	1.4134					31	12	3	0	0	0	0.11606	2	26515	26515;26567		43.982	21.246	1	1289400			3392	5137	1652	1664	4164;4165	4164					-0.07624625804419338
DYGDRFWDI	9	Unmodified	_DYGDRFWDI_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|4|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|3|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|1|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|2|intron;ENST00000461880.5_1_6:31847863-31852380:-|nuORF;ENST00000494816.5_1_6:31847863-31852859:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.7627441287041	2	593.76182	1185.50909	2.6827	0.0015929	-0.50696	-0.00030101	2.1758	0.0012919	593.7614038509224	62.678	0.43724	64.623	64.438	64.875	1.9444					29	13	3	0	0	0	0.11606	2	26305	26305;26359		43.982	14.9	1	1729400			3393	5137	1652	1664	4166;4167	4166					-0.07624625804419338
DYGEINQLL	9	Unmodified	_DYGEINQLL_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7680541872978	2	532.766571	1063.51859	2.8056	0.0014947	-1.7491	-0.00093185	1.0565	0.00056287	532.7665948752732	65.516	0.4624	66.915	66.632	67.094	1.3989					20	14	2	0	0	0	0.033794	2	27456	27409;27456		81.613	50.977	1	15387000			3394	1003	1653	1665	4168;4169	4169					-0.010628575189002731
DYGEINQLL	9	Unmodified	_DYGEINQLL_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1064.530566394329	1	1064.52587	1063.51859	3.3286	0.0035434	-0.2631	-0.00028008	3.0655	0.0032633	1064.5254441997486	65.493	0.34044	66.892	66.694	67.034	1.3989					22	10	3	0	0	0	0.0044745	2	27436	27436;27489		123.45	45.301	1	3711700			3395	1003	1653	1665	4170;4171	4170					-0.010628575189002731
DYGEINQLL	9	Unmodified	_DYGEINQLL_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7676269412041	2	532.766571	1063.51859	2.0847	0.0011107	-0.25162	-0.00013405	1.8331	0.00097662	532.7668080532573	65.138	0.43394	67.047	66.815	67.248	1.9085					26	13	3	0	0	0	0.033794	3	27313	27265;27313;27351		81.613	50.977	1	15868000			3396	1003	1653	1665	4172;4173;4174	4173					-0.010628575189002731
DYGEINQLL	9	Unmodified	_DYGEINQLL_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1064.525805652142	1	1064.52587	1063.51859	2.4075	0.0025629	-0.6347	-0.00067565	1.7728	0.0018872	1064.5246184378123	65.17	0.43394	67.078	66.815	67.248	1.9085					20	13	2	0	0	0	0.01454	2	27305	27305;27358		103.75	42.391	1	3638500			3397	1003	1653	1665	4175;4176	4175					-0.010628575189002731
DYGIVADLF	9	Unmodified	_DYGIVADLF_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000560179.1_1_15:76508902-76518306:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.502246081829	1	1012.49859	1011.49131	4.4342	0.0044897	0.15692	0.00015888	4.5912	0.0046485	1012.4986891057725	89.922	0.79038	90.942	90.646	91.437	1.0199					54	24	3	0	0	0	0.031324	4	37881	37835;37881;37920;37962		85.357	34.502	1	10898000			3398	2912	1654	1666	4177;4178;4179;4180	4178					-0.013973410592939217
DYGIVADLF	9	Unmodified	_DYGIVADLF_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000560179.1_1_15:76508902-76518306:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7558166384697	2	506.752933	1011.49131	5.1122	0.0025906	0.42838	0.00021709	5.5406	0.0028077	506.7530790862856	89.84	0.53819	90.86	90.769	91.307	1.0199					25	16	3	0	0	0	0.37357	1	37858	37858		21.747	4.8044	1	3635000			3399	2912	1654	1666	4181	4181					-0.013973410592939217
DYGIVADLF	9	Unmodified	_DYGIVADLF_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000560179.1_1_15:76508902-76518306:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.501940906048	1	1012.49859	1011.49131	4.4963	0.0045525	-1.3998	-0.0014173	3.0965	0.0031352	1012.4977098416635	89.535	0.5688	90.94	90.735	91.304	1.4045					35	17	3	0	0	0	0.031324	5	37790	37669;37712;37751;37790;37845		85.357	34.502	1	7321300			3400	2912	1654	1666	4182;4183;4184;4185;4186	4185					-0.013973410592939217
DYGIVADLF	9	Unmodified	_DYGIVADLF_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000560179.1_1_15:76508902-76518306:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7551147341728	2	506.752933	1011.49131	4.4957	0.0022782	0.31439	0.00015932	4.8101	0.0024375	506.75319475476607	89.568	0.44286	90.972	90.766	91.209	1.4045					28	13	3	0	0	0	0.27148	1	37742	37742		26.884	9.9414	1	1470300			3401	2912	1654	1666	4187	4187					-0.013973410592939217
DYHTKLFLI	9	Unmodified	_DYHTKLFLI_					0	0	0		nc|ENSG00000175221|Q9Y2X0-5|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16;nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;ENSG00000175221|ENST00000325464|MED16	nc|ENSG00000175221|Q9Y2X0-5|MED16	nc|ENSG00000175221|Q9Y2X0-5|MED16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3191406130791	2	575.318774	1148.623	0.841	0.00048384	1.3762	0.00079176	2.2172	0.0012756	575.3192517650406	56.305	0.52534	57.715	57.653	58.179	1.4099					28	16	2	0	0	0	0.039278	2	23628	23628;23719		76.825	46.188	1	2349500			3402	4363	1655	1667	4188;4189	4188					0.054628890284675435
DYHTKLFLI	9	Unmodified	_DYHTKLFLI_					0	0	0		nc|ENSG00000175221|Q9Y2X0-5|MED16;nc|ENSG00000175221|Q9Y2X0-4|MED16;nc|ENSG00000175221|Q9Y2X0-2|MED16;nc|ENSG00000175221|Q9Y2X0-3|MED16;ENSG00000175221|ENST00000325464|MED16	nc|ENSG00000175221|Q9Y2X0-5|MED16	nc|ENSG00000175221|Q9Y2X0-5|MED16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3204833865166	2	575.318774	1148.623	0.97519	0.00056105	0.5964	0.00034312	1.5716	0.00090417	575.3184676781675	55.857	0.54359	57.825	57.666	58.21	1.9684					27	17	2	0	0	0	0.060242	2	23457	23396;23457		63.961	32.692	1	3014100			3403	4363	1655	1667	4190;4191	4191					0.054628890284675435
DYIDTIWKI	9	Unmodified	_DYIDTIWKI_					0	0	0		ENSG00000156017|ENST00000376834|CARNMT1	ENSG00000156017|ENST00000376834|CARNMT1	ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.8097411990166	2	583.808239	1165.60193	2.4069	0.0014052	0.5878	0.00034316	2.9947	0.0017483	583.8084531629489	75.82	0.67754	77.114	76.694	77.371	1.2938					67	21	5	0	0	0	0.031145	3	31802	31757;31802;31856		85.642	53.336	1	13480000			3404	3436	1656	1668	4192;4193;4194	4193					0.025748789289536944
DYIDTIWKI	9	Unmodified	_DYIDTIWKI_					0	0	0		ENSG00000156017|ENST00000376834|CARNMT1	ENSG00000156017|ENST00000376834|CARNMT1	ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8097411990166	2	583.808239	1165.60193	2.6615	0.0015538	0.055527	3.2417E-05	2.7171	0.0015862	583.8081245163625	75.305	0.55173	77.086	76.854	77.406	1.7817					64	17	5	0	0	0	0.026734	3	31578	31532;31578;31630		92.653	56.526	1	12189000			3405	3436	1656	1668	4195;4196;4197	4196					0.025748789289536944
DYIGFNKSL	9	Unmodified	_DYIGFNKSL_					0	0	0			REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7722045779228	2	528.771657	1055.52876	2.0155	0.0010657	-0.6204	-0.00032805	1.3951	0.00073767	528.7716107003671	66.192	0.30289	67.581	67.448	67.751	1.3888					16	9	2	0	0	0	0.17276	1	27778	27778		36.127	5.4905	1	2094400	+		3406	10933	1657	1669	4198	4198					0.003217502063534994
DYIGFNKSL	9	Unmodified	_DYIGFNKSL_					0	0	0			REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	528.771657	1055.52876	2.0155	0.0010657	-0.6204	-0.00032805	1.3951	0.00073767	528.7716107003671	66.192	0.30289	67.581	67.448	67.751	1.3888	-0.10747	0.0012931	NaN	36.127	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2094400	+		3407	10933	1657	1669							0.003217502063534994
DYIGFNKSL	9	Unmodified	_DYIGFNKSL_					0	0	0			REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	528.771657	1055.52876	1.8972	0.0010032	-2.4597	-0.0013006	-0.56246	-0.00029741	528.7708464133722	65.888	0.30498	67.796	67.616	67.921	1.9085	0.10747	-0.00065197	NaN	36.127	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1677500	+		3408	10933	1657	1669							0.003217502063534994
DYIIEDLDL	9	Unmodified	_DYIIEDLDL_					0	0	0		tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7746459841728	2	554.774062	1107.53357	1.5389	0.00085374	1.0751	0.00059642	2.614	0.0014502	554.774010175782	43.133	0.2807	44.487	44.279	44.559	1.3536					16	8	3	0	0	0	0.37357	1	18075	18075		21.747	3.6003	1	1281600			3409	16828	1658	1670	4199	4199					-0.015894104415792754
DYIIEDLDL	9	Unmodified	_DYIIEDLDL_					0	0	0		tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7769653201103	2	554.774062	1107.53357	1.6958	0.0009408	0.028705	1.5925E-05	1.7245	0.00095673	554.7738331742613	42.532	0.28056	44.453	44.29	44.57	1.9211					18	8	3	0	0	0	0.34572	1	17796	17796		23.148	6.2061	1	896600			3410	16828	1658	1670	4200	4200					-0.015894104415792754
DYIKFLRSI	9	Unmodified	_DYIKFLRSI_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF	ENSG00000116478|ENST00000373548|HDAC1	ENSG00000116478|ENST00000373548|HDAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	385.5581848025322	3	385.557125	1153.64954	2.2439	0.00086517	0.094726	3.6522E-05	2.3387	0.00090169	385.5572213578728	60.409	0.67714	61.828	61.507	62.184	1.4196					82	21	5	0	0	0	0.24465	3	25376	25287;25337;25376		28.234	14.015	1	29833000			3411	1970	1659	1671	4201;4202;4203	4203					0.07886577919794036
DYIKFLRSI	9	Unmodified	_DYIKFLRSI_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF	ENSG00000116478|ENST00000373548|HDAC1	ENSG00000116478|ENST00000373548|HDAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8348266482353	2	577.832049	1153.64954	2.8555	0.00165	1.7925	0.0010358	4.648	0.0026858	577.8328748797694	60.409	0.8728	61.829	61.536	62.409	1.4196					78	27	5	0	0	0	0.022548	3	25312	25312;25351;25395		114.5	58.32	1	15640000			3412	1970	1659	1671	4204;4205;4206	4204					0.07886577919794036
DYIKFLRSI	9	Unmodified	_DYIKFLRSI_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF	ENSG00000116478|ENST00000373548|HDAC1	ENSG00000116478|ENST00000373548|HDAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	385.5583373904228	3	385.557125	1153.64954	2.7806	0.0010721	-0.12643	-4.8747E-05	2.6542	0.0010233	385.5571363581156	59.919	0.7455	61.888	61.55	62.296	1.969					79	23	5	0	0	0	0.21266	2	25103	25103;25153		31.636	13.263	1	26994000			3413	1970	1659	1671	4207;4208	4207					0.07886577919794036
DYIKFLRSI	9	Unmodified	_DYIKFLRSI_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF	ENSG00000116478|ENST00000373548|HDAC1	ENSG00000116478|ENST00000373548|HDAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8353759646416	2	577.832049	1153.64954	3.0001	0.0017336	2.1871	0.0012638	5.1872	0.0029973	577.8331836936718	59.934	0.58915	61.903	61.582	62.171	1.969					54	18	4	0	0	0	0.0076503	3	25155	25115;25155;25212		121.35	69.078	1	12847000			3414	1970	1659	1671	4209;4210;4211	4210					0.07886577919794036
DYINGGELF	9	Unmodified	_DYINGGELF_					0	0	0		nc|ENSG00000100784|O75582-2|RPS6KA5;ENSG00000100784|ENST00000614987|RPS6KA5;ENST00000524764.1_1_6:134493798-134494280:-|nuORF;ENST00000367855.7_1_6:134492115-134495951:-|nuORF;nc|ENSG00000118515|O00141-4|SGK1;nc|ENSG00000118515|O00141|SGK1;nc|ENSG00000118515|O00141-5|SGK1;nc|ENSG00000100784|O75582-3|RPS6KA5;ENSG00000118515|ENST00000367858|SGK1;nc|ENSG00000118515|O00141-3|SGK1	nc|ENSG00000100784|O75582-2|RPS6KA5;ENSG00000118515|ENST00000367858|SGK1;nc|ENSG00000118515|O00141-3|SGK1	nc|ENSG00000100784|O75582-2|RPS6KA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.7489501833916	2	514.24019	1026.46583	2.4669	0.0012686	-2.5571	-0.001315	-0.090182	-4.6375E-05	514.2385200732263	84.152	0.64054	85.79	85.559	86.199	1.6379					73	20	5	0	0	0	0.59203	1	35407	35407		11.64	0.52583	1	19161000			3415	1302;2039;7858	1660	1672	4212	4212					-0.046348155816986036
DYIPQLAKF	9	Unmodified	_DYIPQLAKF_					0	0	0		nc|ENSG00000115419|O94925-3|GLS;ENSG00000115419|ENST00000320717|GLS;ENST00000469774.1_1_2:191760380-191769916:+|nuORF	nc|ENSG00000115419|O94925-3|GLS	nc|ENSG00000115419|O94925-3|GLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.7993041872978	2	547.797675	1093.5808	1.3895	0.00076118	0.55123	0.00030197	1.9408	0.0010631	547.797710160216	58.298	0.31181	60.267	60.117	60.429	1.969					21	9	3	0	0	0	0.22154	2	24449	24449;24502		30.637	18.105	1	2563900			3416	1918	1661	1673	4213;4214	4213					0.03774913620077314
DYIPQLAKF	9	Unmodified	_DYIPQLAKF_					0	0	0		nc|ENSG00000115419|O94925-3|GLS;ENSG00000115419|ENST00000320717|GLS;ENST00000469774.1_1_2:191760380-191769916:+|nuORF	nc|ENSG00000115419|O94925-3|GLS	nc|ENSG00000115419|O94925-3|GLS	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	547.797675	1093.5808	1.4504	0.00079452	-0.66391	-0.00036369	0.78648	0.00043083	547.7969982773184	58.817	0.34492	60.236	60.036	60.381	1.4192	-0.015397	-0.00083412	NaN	30.637	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2184300			3417	1918	1661	1673							0.03774913620077314
DYIRKRRL	8	Unmodified	_DYIRKRRL_					0	0	0		tr|A0A7D6ZRG3|A0A7D6ZRG3_9CLOTAraCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03695PE=4SV=1	tr|A0A7D6ZRG3|A0A7D6ZRG3_9CLOTAraCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03695PE=4SV=1	tr|A0A7D6ZRG3|A0A7D6ZRG3_9CLOTAraCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3430663943291	2	560.340907	1118.66726	4.6478	0.0026044	0.26791	0.00015012	4.9157	0.0027545	560.3408691028393	87.254	0.55872	88.749	88.456	89.015	1.4953					60	17	5	0	0	0	0.89176	1	36751	36751		0.79363	0	1	27629000			3418	17125	1662	1674	4215	4215					0.11267337965318802
DYIRSFIFK	9	Unmodified	_DYIRSFIFK_					0	0	0		tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.8859435915947	3	396.885241	1187.63389	1.3043	0.00051768	1.0552	0.00041879	2.3595	0.00093647	396.8854435348823	66.828	0.41051	68.217	67.996	68.407	1.3888					31	12	3	0	0	0	0.62937	1	28064	28064		10.151	1.1743	1	1817300			3419	17015	1663	1675	4216	4216					0.04758291402731629
DYIRSFIFK	9	Unmodified	_DYIRSFIFK_					0	0	0		tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8259765505791	2	594.824224	1187.63389	1.7367	0.001033	1.5147	0.000901	3.2514	0.001934	594.8256075680687	66.373	0.50122	68.261	68.025	68.527	1.8889					25	15	3	0	0	0	0.11606	1	27829	27829		47.749	11.622	1	1912500			3420	17015	1663	1675	4217	4217					0.04758291402731629
DYIRSFIFK	9	Unmodified	_DYIRSFIFK_					0	0	0		tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	594.824224	1187.63389	1.8481	0.0010993	1.691	0.0010059	3.5391	0.0021051	594.8253400616213	66.841	0.52985	68.229	67.996	68.526	1.3888	-0.016001	5.5171E-05	NaN	47.749	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1813100			3421	17015	1663	1675							0.04758291402731629
DYIRSFIFK	9	Unmodified	_DYIRSFIFK_					0	0	0		tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	tr|A0A7D6W0L6|A0A7D6W0L6_9CLOTDUF1887familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00270PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	396.885241	1187.63389	1.5111	0.00059974	0.53492	0.0002123	2.046	0.00081204	396.88543671169305	66.34	0.44199	68.229	68.025	68.467	1.8889	0.0061505	-0.00029847	NaN	10.151	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2114800			3422	17015	1663	1675							0.04758291402731629
DYKGDATVFFI	11	Unmodified	_DYKGDATVFFI_					0	0	0		ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	ENSG00000100665|ENST00000557004|SERPINA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3171264529228	2	638.316428	1274.6183	1.165	0.00074365	0.18419	0.00011757	1.3492	0.00086122	638.3164028101829	54.93	0.40675	56.335	56.121	56.528	1.4048					48	13	5	0	0	0	0.34699	1	23047	23047		28.495	5.8364	1	25832000			3423	1296	1664	1676	4218	4218					-0.00802039904965568
DYKNTFPKW	9	Unmodified	_DYKNTFPKW_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7993041872978	2	599.798206	1197.58186	1.247	0.00074795	0.12367	7.4176E-05	1.3707	0.00082212	599.7983765585841	38.004	0.28875	39.288	39.113	39.401	1.284					14	10	2	0	0	0	0.025926	1	15953	15953		93.938	66.309	1	3439200			3424	179	1665	1677	4219	4219					-0.00902872010988176
DYKNTFPKW	9	Unmodified	_DYKNTFPKW_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.8002197146416	2	599.798206	1197.58186	0.80066	0.00048023	0.67301	0.00040367	1.4737	0.0008839	599.7983399386488	37.346	0.28494	39.166	39.023	39.308	1.8202					21	11	2	0	0	0	0.16939	2	15656	15656;15708		36.506	20.659	1	1109300			3425	179	1665	1677	4220;4221	4220					-0.00902872010988176
DYLEHITSI	9	Unmodified	_DYLEHITSI_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1;ENST00000214893.9_1_9:5823966-5832826:-|nuORF;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7728149294853	2	545.774396	1089.53424	0.89191	0.00048678	-2.5464	-0.0013898	-1.6545	-0.00090299	545.7733567683402	52.396	0.30952	53.792	53.62	53.93	1.3966					19	9	3	0	0	0	0.0092758	2	21920	21920;21969		108	55.729	1	3261100			3426	1202;6777	1666	1678	4222;4223	4222					-0.006945710018499085
DYLEHITSI	9	Unmodified	_DYLEHITSI_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1;ENST00000214893.9_1_9:5823966-5832826:-|nuORF;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1;ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7744018435478	2	545.774396	1089.53424	1.1318	0.00061773	-1.0331	-0.00056386	0.098714	5.3876E-05	545.7736333471497	51.868	0.30838	53.84	53.676	53.985	1.9722					21	9	3	0	0	0	0.023786	2	21743	21696;21743		96.285	45.43	1	3594900			3427	1202;6777	1666	1678	4224;4225	4225					-0.006945710018499085
DYLEWPEYF	9	Unmodified	_DYLEWPEYF_					0	0	0		ENSG00000129187|ENST00000438320|DCTD;nc|ENSG00000129187|P32321-2|DCTD	ENSG00000129187|ENST00000438320|DCTD	ENSG00000129187|ENST00000438320|DCTD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.2778198122978	2	631.274229	1260.53391	4.423	0.0027922	-0.048208	-3.0432E-05	4.3748	0.0027617	631.2742077497746	90.018	0.79225	91.038	90.739	91.531	1.0199					75	24	4	0	0	0	0.029093	5	37897	37851;37897;37947;37987;38028		88.904	64.883	1	11796000			3428	2394	1667	1679	4226;4227;4228;4229;4230	4227					-0.08593990721715272
DYLEWPEYF	9	Unmodified	_DYLEWPEYF_					0	0	0		ENSG00000129187|ENST00000438320|DCTD;nc|ENSG00000129187|P32321-2|DCTD	ENSG00000129187|ENST00000438320|DCTD	ENSG00000129187|ENST00000438320|DCTD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.2759277224541	2	631.274229	1260.53391	3.8924	0.0024572	-0.15015	-9.4784E-05	3.7423	0.0023624	631.274248815538	89.724	0.69358	91.128	90.766	91.46	1.4045					67	21	4	0	0	0	0.029093	5	37753	37704;37753;37803;37842;37884		88.904	59.822	1	8445000			3429	2394	1667	1679	4231;4232;4233;4234;4235	4232					-0.08593990721715272
DYLHCQGVS	9	Unmodified	_DYLHCQGVS_					0	0	0		ENST00000495332.1_1_X:83359500-83361456:-|nuORF	ENST00000495332.1_1_X:83359500-83361456:-|nuORF	ENST00000495332.1_1_X:83359500-83361456:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	511.2646057009697	2	511.224017	1020.43348	3.0363	0.0015522	0.81631	0.00041732	3.8526	0.0019695	511.2248204340707	65.569	0.55103	66.968	66.601	67.152	1.3989					24	17	2	0	0	0	0.10591	1	27536	27536		19.257	3.4888	1	1367500			3430	6944	1668	1680	4236	4236					-0.07591926256350234
DYLICLFP	8	Carbamidomethyl (C)	_DYLIC(Carbamidomethyl (C))LFP_	DYLIC(1)LFP		DYLIC(50)LFP		0	1	0			REV__CON__P34955	REV__CON__P34955	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7626220583916	2	520.759704	1039.50485	5.0167	0.0026125	-0.42587	-0.00022177	4.5908	0.0023907	520.7596780712548	89.828	0.62225	90.847	90.556	91.178	1.0199					52	19	3	0	0	0	0.47134	1	37898	37898		49.669	15.566	1	6670400	+	+	3431	8381	1669	1681	4237	4237	14				-0.013318065517069044
DYLSYREF	8	Unmodified	_DYLSYREF_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7534667849541	2	546.753464	1091.49238	2.3303	0.0012741	-0.49118	-0.00026856	1.8391	0.0010055	546.7531590908412	75.572	0.64516	76.878	76.435	77.08	1.3063					59	20	4	0	0	0	0.7006	2	31768	31662;31768		30.225	3.3412	1	5995900			3432	1798	1670	1682	4238;4239	4239					-0.04971126690384153
DYLSYREF	8	Unmodified	_DYLSYREF_					0	0	0		nc|ENSG00000112851|Q96RT1-7|ERBIN;nc|ENSG00000112851|Q96RT1-6|ERBIN;nc|ENSG00000112851|Q96RT1-4|ERBIN;nc|ENSG00000112851|Q96RT1-5|ERBIN;nc|ENSG00000112851|Q96RT1-3|ERBIN;nc|ENSG00000112851|Q96RT1-9|ERBIN;nc|ENSG00000112851|Q96RT1-2|ERBIN;ENSG00000112851|ENST00000284037|ERBIN;nc|ENSG00000112851|Q96RT1-8|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7533447146416	2	546.753464	1091.49238	2.7134	0.0014836	-1.5619	-0.00085396	1.1515	0.00062961	546.7523692366092	75.151	0.46698	76.932	76.699	77.166	1.7817					40	14	4	0	0	0	0.51105	1	31563	31563		46.921	8.7697	1	4552400			3433	1798	1670	1682	4240	4240					-0.04971126690384153
DYMKTTSNF	9	Unmodified	_DYMKTTSNF_					0	0	0		nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-4|NEMF	nc|ENSG00000165525|O60524-3|NEMF	nc|ENSG00000165525|O60524-3|NEMF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7452270388603	2	553.744782	1105.47501	1.111	0.00061519	0.22057	0.00012214	1.3315	0.00073733	553.7451630880466	26.343	0.28086	27.615	27.466	27.747	1.2715					18	8	4	0	0	0	0.55689	1	11008	11008		13.042	3.695	1	556160			3434	3844	1671	1683	4241	4241					-0.07350790287682685
DYMKTTSNF	9	Unmodified	_DYMKTTSNF_					0	0	0		nc|ENSG00000165525|O60524-3|NEMF;ENSG00000165525|ENST00000298310|NEMF;nc|ENSG00000165525|O60524-4|NEMF	nc|ENSG00000165525|O60524-3|NEMF	nc|ENSG00000165525|O60524-3|NEMF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	553.744782	1105.47501	0.5689	0.00031502	0.61959	0.00034309	1.1885	0.00065812	553.744599098761	25.911	0.27289	27.628	27.459	27.732	1.7167	0.0064768	0.00020314	NaN	13.042	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644040			3435	3844	1671	1683							-0.07350790287682685
DYMYDELQ	8	Unmodified	_DYMYDELQ_					0	0	0			REV__tr|A0A553SFQ2|A0A553SFQ2_NIACIasparaginesynthase(glutamine-hydrolyzing)OS=NialliacirculansOX=1397GN=asnBPE=3SV=1	REV__tr|A0A553SFQ2|A0A553SFQ2_NIACIasparaginesynthase(glutamine-hydrolyzing)OS=NialliacirculansOX=1397GN=asnBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	358.9808227419853	3	359.479552	1075.41683	2.0901	0.00075136	-0.61176	-0.00021991	1.4784	0.00053144	359.8124471338766	59.559	0.25049	59.885	59.808	60.058	0.32553					11	7	2	0	0	0	2.3239	1	24993	24993		1.8442	0	1	690560	+		3436	14714	1672	1684	4242	4242					-0.1178647193296456
DYNFVFTSF	9	Unmodified	_DYNFVFTSF_					0	0	0		nc|ENSG00000123505|P17707-2|AMD1;ENSG00000123505|ENST00000368885|AMD1	nc|ENSG00000123505|P17707-2|AMD1	nc|ENSG00000123505|P17707-2|AMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1139.506152331829	1	1139.5044	1138.49713	4.1691	0.0047507	0.094424	0.0001076	4.2635	0.0048583	1139.5043150791726	87.445	0.36956	88.537	88.335	88.704	1.0918					28	11	4	0	0	0	0.0058174	2	36901	36847;36901		118.89	82.768	1	7695200			3437	2193	1673	1685	4243;4244	4244					-0.06658242547609916
DYNFVFTSF	9	Unmodified	_DYNFVFTSF_					0	0	0		nc|ENSG00000123505|P17707-2|AMD1;ENSG00000123505|ENST00000368885|AMD1	nc|ENSG00000123505|P17707-2|AMD1	nc|ENSG00000123505|P17707-2|AMD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	570.2908813357353	2	570.25584	1138.49713	4.55	0.0025946	-1.3811	-0.00078757	3.1689	0.0018071	570.2552835657875	87.428	0.3707	88.52	88.272	88.643	1.0918					33	11	4	0	0	0	0.070139	1	36867	36867		39.95	31.356	1	15792000			3438	2193	1673	1685	4245	4245					-0.06658242547609916
DYNFVFTSF	9	Unmodified	_DYNFVFTSF_					0	0	0		nc|ENSG00000123505|P17707-2|AMD1;ENSG00000123505|ENST00000368885|AMD1	nc|ENSG00000123505|P17707-2|AMD1	nc|ENSG00000123505|P17707-2|AMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1139.508227527142	1	1139.5044	1138.49713	4.4623	0.0050848	-1.2477	-0.0014218	3.2146	0.003663	1139.5032959400871	87.13	0.46149	88.626	88.364	88.825	1.4953					35	14	3	0	0	0	0.007852	3	36726	36678;36726;36782		111.29	75.16	1	6320000			3439	2193	1673	1685	4246;4247;4248	4247					-0.06658242547609916
DYNFVFTSF	9	Unmodified	_DYNFVFTSF_					0	0	0		nc|ENSG00000123505|P17707-2|AMD1;ENSG00000123505|ENST00000368885|AMD1	nc|ENSG00000123505|P17707-2|AMD1	nc|ENSG00000123505|P17707-2|AMD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	570.2910644412041	2	570.25584	1138.49713	4.6987	0.0026794	-2.3385	-0.0013335	2.3602	0.0013459	570.2547125032116	87.131	0.27717	88.626	88.518	88.796	1.4953					22	8	3	0	0	0	0.052918	1	36722	36722		47.749	29.614	1	13007000			3440	2193	1673	1685	4249	4249					-0.06658242547609916
DYPRYLFEI	9	Unmodified	_DYPRYLFEI_					0	0	0		nc|ENSG00000007202|Q14667-2|BLTP2;ENSG00000007202|ENST00000528896|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.3074218630791	2	608.305864	1214.59717	3.4533	0.0021007	-1.211	-0.00073667	2.2423	0.001364	608.3054174092141	73.6	1.0907	74.918	74.59	75.681	1.318					85	34	4	0	0	0	0.043434	6	30875	30792;30838;30875;30914;30953;31001		79.596	39.647	1	33295000			3441	518	1674	1686	4250;4251;4252;4253;4254;4255	4252					-0.0015400521381252474
DYPRYLFEI	9	Unmodified	_DYPRYLFEI_					0	0	0		nc|ENSG00000007202|Q14667-2|BLTP2;ENSG00000007202|ENST00000528896|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	nc|ENSG00000007202|Q14667-2|BLTP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3069946169853	2	608.305864	1214.59717	2.6115	0.0015886	-0.98331	-0.00059816	1.6282	0.00099042	608.3056861851645	73.087	1.1579	74.897	74.543	75.701	1.8101					82	36	5	0	0	0	0.027721	5	30614	30572;30614;30652;30691;30735		89.401	39.647	1	31656000			3442	518	1674	1686	4256;4257;4258;4259;4260	4257					-0.0015400521381252474
DYQCHSNAVF	10	Unmodified	_DYQCHSNAVF_					0	0	0			REV__tr|A0A553SGF4|A0A553SGF4_NIACIGlycineoxidaseThiOOS=NialliacirculansOX=1397GN=thiOPE=4SV=1	REV__tr|A0A553SGF4|A0A553SGF4_NIACIGlycineoxidaseThiOOS=NialliacirculansOX=1397GN=thiOPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.7499877810478	2	592.24548	1182.47641	1.2299	0.00072842	0.93653	0.00055466	2.1665	0.0012831	592.246188916641	53.688	0.27945	55.088	54.975	55.255	1.4005					18	10	2	0	0	0	0.85604	1	22516	22516		6.2058	1.3088	1	4946500	+		3443	14744	1675	1687	4261	4261					-0.10753156198938996
DYQEMFVQF	9	Unmodified	_DYQEMFVQF_					0	0	0		ENST00000597643.5_1_19:17434328-17439993:-|nuORF;nc|ENSG00000074855|Q9HCE9-2|ANO8;ENSG00000074855|ENST00000159087|ANO8	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.7615844607353	2	603.760432	1205.50631	2.5024	0.0015109	-0.34121	-0.00020601	2.1612	0.0013049	603.7603849824831	77.367	0.47739	78.648	78.41	78.888	1.2809					37	14	4	0	0	0	0.01454	2	32459	32459;32505		103.75	78.349	1	2018500			3444	920	1676	1688	4262;4263	4262					-0.08822217253600684
DYQEMFVQF	9	Unmodified	_DYQEMFVQF_					0	0	0		ENST00000597643.5_1_19:17434328-17439993:-|nuORF;nc|ENSG00000074855|Q9HCE9-2|ANO8;ENSG00000074855|ENST00000159087|ANO8	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.7618286013603	2	603.760432	1205.50631	1.8296	0.0011047	-0.067597	-4.0813E-05	1.762	0.0010639	603.7603921358445	76.985	0.47972	78.737	78.498	78.977	1.7514					35	14	3	0	0	0	0.033504	2	32296	32244;32296		81.89	62.451	1	2704800			3445	920	1676	1688	4264;4265	4265					-0.08822217253600684
DYQWMSFIRDR	11	Unmodified	_DYQWMSFIRDR_					0	0	0		tr|A0A553SRB0|A0A553SRB0_NIACIEndo-beta-N-acetylglucosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00765PE=4SV=1	tr|A0A553SRB0|A0A553SRB0_NIACIEndo-beta-N-acetylglucosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00765PE=4SV=1	tr|A0A553SRB0|A0A553SRB0_NIACIEndo-beta-N-acetylglucosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2375366091728	3	506.238237	1515.69288	0.82296	0.00041661	0.64322	0.00032562	1.4662	0.00074223	506.573313709598	18.059	0.32602	19.038	18.791	19.117	0.97922					18	10	2	0	0	0	0.9945	1	7477	7477		4.1166	1.6818	1	1242800			3446	16548	1677	1689	4266	4266					-0.04433600365246093
DYRPRKCR	8	Unmodified	_DYRPRKCR_					0	0	0		ENST00000424720.2_12:132824120-132905933:-|nuORF;nc|ENSG00000182870|Q9HCQ5|GALNT9;ENSG00000182870|ENST00000328957|GALNT9	ENST00000424720.2_12:132824120-132905933:-|nuORF	ENST00000424720.2_12:132824120-132905933:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2886230349541	2	547.287817	1092.56108	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.67	1	12.364	11.864	12.864	0.69396								0	0	0	1.0178	1	4848	4848		2.5775	0	1				3447	4630	1678	1690	4267	4267					0.01850259128354992
DYSRLMNYF	9	Unmodified	_DYSRLMNYF_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7734863162041	2	604.773874	1207.53319	1.7315	0.0010472	-2.7633	-0.0016712	-1.0318	-0.00062402	604.7723720165205	48.905	2.3989	50.293	49.458	51.857	1.388					165	76	3	0	0	0	0.37357	2	20459	20459;20594		21.747	1.7076	1	3832500	+		3448	11520	1679	1691	4268;4269	4268					-0.06227108642406165
DYSRLMNYF	9	Unmodified	_DYSRLMNYF_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7747680544853	2	604.773874	1207.53319	2.028	0.0012265	-2.7842	-0.0016838	-0.75615	-0.0004573	604.7723106840883	48.387	1.5749	50.364	49.837	51.412	1.9772					138	50	3	0	0	0	0.37357	2	20241	20241;20446		21.747	1.293	1	4746800	+		3449	11520	1679	1691	4270;4271	4270					-0.06227108642406165
DYSSILQKF	9	Unmodified	_DYSSILQKF_					0	0	0		FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant;nc|ENSG00000187239|Q96RU3-4|FNBP1;nc|ENSG00000187239|Q96RU3-3|FNBP1;nc|ENSG00000187239|Q96RU3-5|FNBP1;nc|ENSG00000187239|Q96RU3-2|FNBP1;ENSG00000187239|ENST00000446176|FNBP1	FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant	FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.7855102419853	2	550.784764	1099.55498	2.8361	0.0015621	0.42067	0.0002317	3.2568	0.0017938	550.7849770515033	61.341	0.48661	62.759	62.533	63.02	1.4177					49	15	4	0	0	0	0.00015001	3	25680	25680;25727;25767		144.35	48.066	1	63713000			3450	4822	1680	1692	4272;4273;4274	4272					0.009180193778320245
DYSSILQKF	9	Unmodified	_DYSSILQKF_					0	0	0		FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant;nc|ENSG00000187239|Q96RU3-4|FNBP1;nc|ENSG00000187239|Q96RU3-3|FNBP1;nc|ENSG00000187239|Q96RU3-5|FNBP1;nc|ENSG00000187239|Q96RU3-2|FNBP1;ENSG00000187239|ENST00000446176|FNBP1	FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant	FNBP1|p.Q503Pfs*31|1|0.07|ENSG00000187239|chr9:129900470-129900471|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.7863036990166	2	550.784764	1099.55498	2.8967	0.0015954	0.29769	0.00016396	3.1944	0.0017594	550.7847724634549	60.84	0.52068	62.805	62.546	63.067	1.9653					53	16	5	0	0	0	3.7622E-05	3	25518	25468;25518;25570		158.2	50.206	1	55875000			3451	4822	1680	1692	4275;4276;4277	4276					0.009180193778320245
DYTGALAVF	9	Unmodified	_DYTGALAVF_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	956.4765502810478	1	956.472374	955.465098	2.2068	0.0021107	-2.4537	-0.0023469	-0.24697	-0.00023622	956.469395957842	70.449	0.38594	71.802	71.616	72.002	1.3536					20	11	2	0	0	0	0.042029	2	29532	29532;29581		74.423	21.323	1	3743900			3452	5470	1681	1693	4278;4279	4278					-0.014416102307677647
DYTGALAVF	9	Unmodified	_DYTGALAVF_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	956.4717285037041	1	956.472374	955.465098	2.6006	0.0024874	-3.1102	-0.0029748	-0.50955	-0.00048737	956.4691297955104	70.053	0.38513	71.891	71.719	72.104	1.8378					19	11	2	0	0	0	0.042029	2	29370	29370;29424		74.423	26.077	1	2360800			3453	5470	1681	1693	4280;4281	4280					-0.014416102307677647
DYTIGFGKF	9	Unmodified	_DYTIGFGKF_					0	0	0		ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant;ITGB4|p.D539*|1|0.13|ENSG00000132470|chr17:75733648-75733649|-/C|frameshift_variant;ITGB4|p.L550Ifs*220|1|0.07|ENSG00000132470|chr17:75733682-75733683|-/AT|frameshift_variant;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-5|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4	ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant	ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2606689333916	2	524.260925	1046.5073	1.0813	0.00056688	0.77601	0.00040683	1.8573	0.00097372	524.2613260174346	58.475	0.28255	59.893	59.752	60.035	1.4181					14	8	2	0	0	0	0.12251	1	24522	24522		41.84	22.583	1	2540200			3454	2535	1682	1694	4282	4282					-0.01409634822357475
DYTIGFGKF	9	Unmodified	_DYTIGFGKF_					0	0	0		ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant;ITGB4|p.D539*|1|0.13|ENSG00000132470|chr17:75733648-75733649|-/C|frameshift_variant;ITGB4|p.L550Ifs*220|1|0.07|ENSG00000132470|chr17:75733682-75733683|-/AT|frameshift_variant;ENST00000580542.5_1_17:73720783-73737087:+|nuORF;nc|ENSG00000132470|P16144-5|ITGB4;nc|ENSG00000132470|P16144-4|ITGB4;nc|ENSG00000132470|P16144-2|ITGB4;nc|ENSG00000132470|P16144-3|ITGB4;ENSG00000132470|ENST00000200181|ITGB4	ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant	ITGB4|p.N318Tfs*58|1|0.73|ENSG00000132470|chr17:75730454-75730454|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.3081542849541	2	524.260925	1046.5073	0.75992	0.0003984	0.56308	0.0002952	1.323	0.0006936	524.260970946088	58.027	0.23847	59.996	59.784	60.023	1.969					13	7	2	0	0	0	0.086272	1	24260	24260		30.637	1.555	1	1639100			3455	2535	1682	1694	4283	4283					-0.01409634822357475
DYVEGLRVF	9	Unmodified	_DYVEGLRVF_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2831298708916	2	549.284931	1096.55531	0.66222	0.00036375	-2.3296	-0.0012796	-1.6674	-0.00091589	549.2837221850973	58.456	0.37495	59.874	59.692	60.067	1.4181					36	11	4	0	0	0	0.040497	3	24518	24468;24518;24562		75.761	47.274	1	28824000			3456	1166	1683	1695	4284;4285;4286	4285					0.010894390976773138
DYVEGLRVF	9	Unmodified	_DYVEGLRVF_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2839233279228	2	549.284931	1096.55531	0.60818	0.00033406	-2.4354	-0.0013377	-1.8272	-0.0010036	549.2833784215817	57.914	0.43768	59.883	59.679	60.117	1.969					44	14	4	0	0	0	0.043696	3	24310	24261;24310;24349		72.968	46.084	1	28090000			3457	1166	1683	1695	4287;4288;4289	4288					0.010894390976773138
DYYNYNAR	8	Unmodified	_DYYNYNAR_					0	0	0			REV__tr|A0A7D6VSS5|A0A7D6VSS5_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17955PE=4SV=1	REV__tr|A0A7D6VSS5|A0A7D6VSS5_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17955PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.3293029665947	3	360.157801	1077.45157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4108	1	7.4108	6.9108	7.9108	0								0	0	0	1.0178	1	3047	3047		1.4819	0.51963	1		+		3458	15462	1684	1696	4290	4290					-0.08405468010028017
DYYPEYKLLF	10	Unmodified	_DYYPEYKLLF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	675.8362914919853	2	675.834454	1349.65436	3.2462	0.0021939	-0.78037	-0.0005274	2.4658	0.0016665	675.8341360229375	73.557	0.34561	74.875	74.685	75.03	1.318					19	10	2	0	0	0	0.31135	1	30884	30884		38.615	26.083	1	1438000			3459	3540	1685	1697	4291	4291					-0.006485827281039747
DYYPEYKLLF	10	Unmodified	_DYYPEYKLLF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	675.8354980349541	2	675.834454	1349.65436	2.246	0.0015179	-0.40223	-0.00027184	1.8437	0.0012461	675.8346708765255	73.089	0.3172	74.899	74.703	75.02	1.8101					22	9	3	0	0	0	0.31135	1	30637	30637		38.615	24.709	1	1415600			3460	3540	1685	1697	4292	4292					-0.006485827281039747
EAADIIQKL	9	Unmodified	_EAADIIQKL_					0	0	0		ENST00000510543.1_1_4:63682918-63683389:+|nuORF;ENST00000554598.5_1_14:57706266-57735366:-|nuORF;ENSG00000070367|ENST00000621441|EXOC5	ENST00000510543.1_1_4:63682918-63683389:+|nuORF	ENST00000510543.1_1_4:63682918-63683389:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7883483767509	2	500.787307	999.560061	2.3812	0.0011925	-1.0873	-0.00054449	1.294	0.000648	500.78701632321093	40.995	0.3467	42.321	42.115	42.462	1.3254					18	10	2	0	0	0	0.079895	1	17176	17176		56.177	29.293	1	820460			3461	850	1686	1698	4293	4293					0.060263232404167866
EAADIIQKL	9	Unmodified	_EAADIIQKL_					0	0	0		ENST00000510543.1_1_4:63682918-63683389:+|nuORF;ENST00000554598.5_1_14:57706266-57735366:-|nuORF;ENSG00000070367|ENST00000621441|EXOC5	ENST00000510543.1_1_4:63682918-63683389:+|nuORF	ENST00000510543.1_1_4:63682918-63683389:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7880126833916	2	500.787307	999.560061	1.9056	0.0009543	-1.1203	-0.00056101	0.78533	0.00039328	500.7871720561308	40.58	0.25264	42.443	42.296	42.548	1.8624					14	7	2	0	0	0	0.079895	1	17006	17006		56.177	29.293	1	1043000			3462	850	1686	1698	4294	4294					0.060263232404167866
EAANLFLDLL	10	Unmodified	_EAANLFLDLL_					0	0	0		nc|ENSG00000163482|Q9NRP7-2|STK36;ENSG00000163482|ENST00000295709|STK36;ENST00000480709.1_1_2:219554611-219557045:+|nuORF;STK36|p.E760Sfs*19|1|0.2|ENSG00000163482|chr2:218693919-218693934|TCTACTGAAGTGACAC/-|frameshift_variant	nc|ENSG00000163482|Q9NRP7-2|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8099243044853	2	559.808239	1117.60193	1.396	0.00078149	2.0312	0.0011371	3.4272	0.0019186	559.8091061592569	70.931	0.38123	71.254	71.049	71.431	0.32359					26	11	3	0	0	0	0.21003	1	29684	29684		47.749	3.8904	1	1924300			3463	3687	1687	1699	4295	4295					0.047828789289496854
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0864440798759	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.38546	1	0.38546	-0.11454	0.88546	0								0	0	0	1.0178	1	157	157		0	0	1				3464	7875	1688	1700	4296	4296					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0873901247978	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.70052	1	0.70052	0.20052	1.2005	0								0	0	0	1.0178	1	287	287		0	0	1				3465	7875	1688	1700	4297	4297					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0873901247978	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.80129	1	0.80129	0.30129	1.3013	0								0	0	0	1.0178	1	328	328		0	0	1				3466	7875	1688	1700	4298	4298					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0875427126884	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6507	1	1.6507	1.1507	2.1507	0								0	0	0	1.0178	1	678	678		0	0	1				3467	7875	1688	1700	4299	4299					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0871459841728	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9453	1	1.9453	1.4453	2.4453	0								0	0	0	1.0178	1	797	797		0	0	1				3468	7875	1688	1700	4300	4300					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0873596072197	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0596	1	2.0596	1.5596	2.5596	0								0	0	0	1.0178	1	844	844		0	0	1				3469	7875	1688	1700	4301	4301					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0868713259697	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1787	1	2.1787	1.6787	2.6787	0								0	0	0	1.0178	1	894	894		0	0	1				3470	7875	1688	1700	4302	4302					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0867492556572	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3066	1	6.3066	5.8066	6.8066	0								0	0	0	1.0178	1	2589	2589		0	0	1				3471	7875	1688	1700	4303	4303					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0867797732353	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8655	1	6.8655	6.3655	7.3655	0								0	0	0	1.0178	1	2821	2821		0	0	1				3472	7875	1688	1700	4304	4304					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0866271853447	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0121	1	8.0121	7.5121	8.5121	0								0	0	0	1.0178	1	3294	3294		0	0	1				3473	7875	1688	1700	4305	4305					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0860473513603	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6527	1	8.6527	8.1527	9.1527	0								0	0	0	1.0178	1	3560	3560		0	0	1				3474	7875	1688	1700	4306	4306					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0871459841728	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8341	1	8.8341	8.3341	9.3341	0								0	0	0	1.0178	1	3635	3635		0	0	1				3475	7875	1688	1700	4307	4307					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0858642458916	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0305	1	9.0305	8.5305	9.5305	0								0	0	0	1.0178	1	3716	3716		0	0	1				3476	7875	1688	1700	4308	4308					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0872070193291	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1586	1	9.1586	8.6586	9.6586	0								0	0	0	1.0178	1	3770	3770		0	0	1				3477	7875	1688	1700	4309	4309					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0862914919853	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.576	1	14.576	14.076	15.076	0								0	0	0	1.0178	1	6048	6048		0	0	1				3478	7875	1688	1700	4310	4310					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0872070193291	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.976	1	14.976	14.476	15.476	0								0	0	0	1.0178	1	6216	6216		0	0	1				3479	7875	1688	1700	4311	4311					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0872375369072	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.347	1	16.347	15.847	16.847	0								0	0	0	1.0178	1	6787	6787		0	0	1				3480	7875	1688	1700	4312	4312					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0875732302666	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.602	1	16.602	16.102	17.102	0								0	0	0	1.0178	1	6892	6892		0	0	1				3481	7875	1688	1700	4313	4313					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0884277224541	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.032	1	17.032	16.532	17.532	0								0	0	0	1.0178	1	7069	7069		0	0	1				3482	7875	1688	1700	4314	4314					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0865661501884	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.575	1	17.575	17.075	18.075	0								0	0	0	1.0178	1	7297	7297		0	0	1				3483	7875	1688	1700	4315	4315					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0872375369072	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.694	1	17.694	17.194	18.194	0								0	0	0	1.0178	1	7347	7347		0	0	1				3484	7875	1688	1700	4316	4316					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0864135622978	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.069	1	18.069	17.569	18.569	0								0	0	0	1.0178	1	7504	7504		0	0	1				3485	7875	1688	1700	4317	4317					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0870849490166	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.794	1	19.794	19.294	20.294	0								0	0	0	1.0178	1	8226	8226		0	0	1				3486	7875	1688	1700	4318	4318					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0872070193291	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.977	1	20.977	20.477	21.477	0								0	0	0	1.0178	1	8721	8721		0	0	1				3487	7875	1688	1700	4319	4319					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0877563357353	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.969	1	22.969	22.469	23.469	0								0	0	0	1.0178	1	9570	9570		0	0	1				3488	7875	1688	1700	4320	4320					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0868713259697	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.882	1	23.882	23.382	24.382	0								0	0	0	1.0178	1	9959	9959		0	0	1				3489	7875	1688	1700	4321	4321					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0871459841728	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.509	1	31.509	31.009	32.009	0								0	0	0	1.0178	1	13204	13204		0	0	1				3490	7875	1688	1700	4322	4322					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0873596072197	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.132	1	32.132	31.632	32.632	0								0	0	0	1.0178	1	13461	13461		0	0	1				3491	7875	1688	1700	4323	4323					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0865966677666	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.381	1	32.381	31.881	32.881	0								0	0	0	1.0178	1	13566	13566		0	0	1				3492	7875	1688	1700	4324	4324					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0863220095634	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.863	1	33.863	33.363	34.363	0								0	0	0	1.0178	1	14190	14190		0	0	1				3493	7875	1688	1700	4325	4325					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.0887328982353	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.558	1	49.558	49.058	50.058	0								0	0	0	1.0178	1	20686	20686		0	0	1				3494	7875	1688	1700	4326	4326					-0.24581483963413575
EACCCCCG	8	Unmodified	_EACCCCCG_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC;ENST00000431629.5_2_7:114654517-114655986:+|nuORF;ENSG00000135272|ENST00000393486|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.0877563357353	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.954	1	32.245	31.745	32.745	0.29086								0	0	0	1.0178	1	13412	13412		0	0	1				3495	7875	1688	1700	4327	4327					-0.24581483963413575
EADEKKKKKG	10	Unmodified	_EADEKKKKKG_					0	0	0		ENSG00000173627|ENST00000308641|APOBEC4	ENSG00000173627|ENST00000308641|APOBEC4	ENSG00000173627|ENST00000308641|APOBEC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1274902224541	3	387.559305	1159.65609	-0.77525	-0.00030045	1.6869	0.00065376	0.91162	0.00035331	387.5599907390909	13.123	0.18719	13.849	13.695	13.882	0.72639					7	5	2	0	0	0	0.1256	1	5426	5426		0	0	1	119760			3496	4292	1689	1701	4328	4328					0.08264471080519797
EADRTLIYI	9	Unmodified	_EADRTLIYI_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000548878.6_1_12:110874873-110883331:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2988159060478	2	547.298039	1092.58152	1.0685	0.00058476	1.1904	0.00065151	2.2589	0.0012363	547.2987021792276	48.676	0.45883	50.064	49.804	50.263	1.388					41	14	4	0	0	0	0.04812	3	20403	20320;20365;20403		69.105	25.247	1	11963000			3497	1732	1690	1702	4329;4330;4331	4331					0.0389370826915183
EADRTLIYI	9	Unmodified	_EADRTLIYI_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000548878.6_1_12:110874873-110883331:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2991821169853	2	547.298039	1092.58152	2.2176	0.0012137	-0.67563	-0.00036977	1.542	0.00084392	547.297737458104	48.185	0.49055	50.162	49.868	50.359	1.9772					43	15	4	0	0	0	0.10473	2	20114	20114;20159		47.749	18.667	1	10734000			3498	1732	1690	1702	4332;4333	4332					0.0389370826915183
EAEDDTSGK	9	Unmodified	_EAEDDTSGK_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1991454958916	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.32	1	13.32	12.82	13.82	0								0	0	0	0.42693	1	5519	5519		4.756	0	1		+		3499	11638	1691	1703	4334	4334					-0.09429177100355446
EAERVMEWLK	10	Unmodified	_EAERVMEWLK_					0	0	0		ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF	ENSG00000163161|ENST00000285398|ERCC3	ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.795	1	14.795	14.295	15.295	0								0	0	0	0.66151	1	6140	6140		1.9064	0.1641	1				3500	3666	1692	1704	4335	4335					0.010571113458127002
EAERVMEWLK	10	Unmodified	_EAERVMEWLK_					0	0	0		ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF	ENSG00000163161|ENST00000285398|ERCC3	ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886596560478	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.129	1	13.228	12.728	13.728	0.09944								0	0	0	0.66222	1	5449	5449		0.69767	0	1				3501	3666	1692	1704	4336	4336					0.010571113458127002
EAERVMEWLK	10	Unmodified	_EAERVMEWLK_					0	0	0		ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF	ENSG00000163161|ENST00000285398|ERCC3	ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.536	1	13.635	13.135	14.135	0.09944								0	0	0	0.66151	1	5617	5617		1.9064	0	1				3502	3666	1692	1704	4337	4337					0.010571113458127002
EAERVMEWLK	10	Unmodified	_EAERVMEWLK_					0	0	0		ENSG00000163161|ENST00000285398|ERCC3;ENST00000426778.5_1_2:128015174-128051559:-|nuORF	ENSG00000163161|ENST00000285398|ERCC3	ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.888	1	12.582	12.082	13.082	0.69396								0	0	0	0.66151	1	4939	4939		1.9064	0	1				3503	3666	1692	1704	4338	4338					0.010571113458127002
EAEWESINV	9	Unmodified	_EAEWESINV_					0	0	0		nc|ENSG00000114107|Q8NHQ1-3|CEP70;ENST00000478673.5_1_3:138250446-138291769:-|nuORF;nc|ENSG00000114107|Q8NHQ1-2|CEP70;nc|ENSG00000114107|Q8NHQ1-5|CEP70;nc|ENSG00000114107|Q8NHQ1-4|CEP70;ENSG00000114107|ENST00000264982|CEP70	nc|ENSG00000114107|Q8NHQ1-3|CEP70	nc|ENSG00000114107|Q8NHQ1-3|CEP70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.5026733279228	3	359.501345	1075.4822	2.0637	0.00074191	-0.43177	-0.00015522	1.6319	0.00058669	359.50225055541125	74.574	0.38935	75.881	75.669	76.059	1.3063					45	10	5	0	0	0	0.59568	1	31271	31271		11.495	0	1	3866000			3504	1850	1693	1705	4339	4339					-0.05251734415628562
EAEWESINV	9	Unmodified	_EAEWESINV_					0	0	0		nc|ENSG00000114107|Q8NHQ1-3|CEP70;ENST00000478673.5_1_3:138250446-138291769:-|nuORF;nc|ENSG00000114107|Q8NHQ1-2|CEP70;nc|ENSG00000114107|Q8NHQ1-5|CEP70;nc|ENSG00000114107|Q8NHQ1-4|CEP70;ENSG00000114107|ENST00000264982|CEP70	nc|ENSG00000114107|Q8NHQ1-3|CEP70	nc|ENSG00000114107|Q8NHQ1-3|CEP70	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	359.501345	1075.4822	2.6166	0.00094066	-0.10403	-3.74E-05	2.5125	0.00090326	359.83612448934315	74.026	0.4871	75.823	75.627	76.114	1.7962	-0.090731	0.00032733	NaN	11.495	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1626800			3505	1850	1693	1705							-0.05251734415628562
EAEWKKEEER	10	Unmodified	_EAEWKKEEER_					0	0	0		ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1202880740166	3	445.217608	1332.63099	0.35701	0.00015895	3.3452	0.0014893	3.7022	0.0016483	445.21952354760793	15.198	0.13748	16.095	16.022	16.159	0.89664					6	4	2	0	0	0	0.12557	1	6314	6314		0.12286	0	1	263320			3506	5044	1694	1706	4340	4340					-0.02201628512739262
EAGAHCPESL	10	Unmodified	_EAGAHCPESL_					0	0	0		ENSG00000167543|ENST00000301057|TP53I13;ENST00000580132.1_1_17:27895803-27896194:+|nuORF	ENSG00000167543|ENST00000301057|TP53I13	ENSG00000167543|ENST00000301057|TP53I13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.7960388064384	2	507.221474	1012.42839	1.8857	0.00095649	-2.6281	-0.001333	-0.74235	-0.00037653	507.2187349832973	65.19	0.28065	67.099	66.938	67.218	1.9085					10	7	2	0	0	0	0.12412	1	27298	27298		14.838	0	1	588380			3507	3973	1695	1707	4341	4341					-0.07732230118983807
EAGPDFEL	8	Unmodified	_EAGPDFEL_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	877.3965942263603	1	877.39379	876.386513	1.662	0.0014582	1.1221	0.00098455	2.7842	0.0024428	877.3944539335032	50.72	0.36366	52.114	51.862	52.226	1.3938					20	11	2	0	0	0	0.070809	2	21230	21179;21230		97.075	40.533	1	1652500			3508	1893	1696	1708	4342;4343	4343					-0.056624625358494995
EAGPDFEL	8	Unmodified	_EAGPDFEL_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	877.3959228396416	1	877.39379	876.386513	1.5088	0.0013238	-0.21497	-0.00018861	1.2938	0.0011352	877.3932849464004	50.197	0.30314	52.174	51.946	52.25	1.9772					17	9	2	0	0	0	0.31225	1	20995	20995		70.716	30.267	1	1763400			3509	1893	1696	1708	4344	4344					-0.056624625358494995
EAIALINSL	9	Unmodified	_EAIALINSL_					0	0	0		ENSG00000101193|ENST00000266069|GID8	ENSG00000101193|ENST00000266069|GID8	ENSG00000101193|ENST00000266069|GID8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2776367068291	2	472.276575	942.538597	1.8133	0.00085637	-0.8968	-0.00042354	0.91649	0.00043284	472.2758862495927	68.779	0.32825	70.632	70.409	70.737	1.853					14	10	2	0	0	0	0.24063	1	28869	28869		28.487	5.3384	1	972550			3510	1328	1697	1709	4345	4345					0.06502938211713172
EAIKIFNSL	9	Unmodified	_EAIKIFNSL_					0	0	0		nc|ENSG00000145555|Q9HD67-3|MYO10;ENSG00000145555|ENST00000513610|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7989990115166	2	517.797675	1033.5808	1.8193	0.00094205	0.14217	7.3614E-05	1.9615	0.0010157	517.7977338995219	54.75	0.43702	56.155	55.835	56.272	1.4048					20	9	3	0	0	0	0.010279	1	22913	22913		107.19	39.106	1	5550000			3511	3112	1698	1710	4346	4346					0.06534913620112093
EAKKRERLERF	11	Unmodified	_EAKKRERLERF_					0	0	0			REV__tr|A0A553SHK0|A0A553SHK0_NIACItRNA-specificadenosinedeaminaseOS=NialliacirculansOX=1397GN=tadAPE=3SV=1	REV__tr|A0A553SHK0|A0A553SHK0_NIACItRNA-specificadenosinedeaminaseOS=NialliacirculansOX=1397GN=tadAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	731.4868041872978	2	731.417874	1460.82119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.927	1	99.124	98.624	99.624	0.19767								0	0	0	0.63775	1	41650	41650		3.8763	1.1411	1		+		3512	14800	1699	1711	4347	4347					0.10921702940140676
EAKKTKVKR	9	Unmodified	_EAKKTKVKR_					0	0	0		nc|ENSG00000185989|Q14644-2|RASA3;ENSG00000185989|ENST00000334062|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3531371951103	2	544.35094	1086.68733	3.2503	0.0017693	1.0841	0.00059015	4.3344	0.0023594	544.3514170997342	105.98	0.28168	106.14	105.99	106.27	0.16174					40	14	5	0	0	0	0.84963	1	45263	45263		0.6015	0	1	764290000			3513	4776	1700	1712	4348	4348					0.1474508890528341
EAKSLSFAEPS	11	Unmodified	_EAKSLSFAEPS_					0	0	0			REV__ENST00000489467.1_1_3:16254210-16261548:+|nuORF	REV__ENST00000489467.1_1_3:16254210-16261548:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.1969482302666	3	389.196033	1164.56627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.72	1	104.78	104.28	105.28	0.056801								0	0	0	0.63775	1	44231	44231		0.40827	0	1		+		3514	9818	1701	1713	4349	4349					-0.009432033186840272
EALFCIQYNVR	11	Unmodified	_EALFCIQYNVR_					0	0	0		ENSG00000133020|ENST00000403437|MYH8	ENSG00000133020|ENST00000403437|MYH8	ENSG00000133020|ENST00000403437|MYH8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	339.6753112673759	4	339.674866	1354.67036	-0.46125	-0.00015668	1.3026	0.00044247	0.84136	0.00028579	339.6754054805093	9.688	0.19721	10.433	10.343	10.54	0.74462					10	6	2	0	0	0	1.0131	1	4041	4041		1.2148	0.51716	1	1232500			3515	2553	1702	1714	4350	4350					0.007208002371271505
EALHRRKTY	9	Unmodified	_EALHRRKTY_					0	0	0			REV__nc|ENSG00000237515|B4DS77-2|SHISA9	REV__nc|ENSG00000237515|B4DS77-2|SHISA9	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3292114138603	2	587.327996	1172.64144	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.381	1	46.381	45.881	46.881	0								0	0	0	0.42693	1	19393	19393		2.0598	0	1		+		3516	11909	1703	1715	4351	4351					0.06202443723032047
EALKIILSSYK	11	Unmodified	_EALKIILSSYK_					0	0	0		tr|A0A7D7A213|A0A7D7A213_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_17780PE=4SV=1	tr|A0A7D7A213|A0A7D7A213_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_17780PE=4SV=1	tr|A0A7D7A213|A0A7D7A213_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_17780PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5902282595634	3	422.255223	1263.74384	4.1132	0.0017368	-1.4019	-0.00059194	2.7114	0.0011449	422.25527975731774	90.758	0.89904	91.739	91.14	92.039	0.98156					58	27	3	0	0	0	1.0388	1	38306	38306		0.50596	0.09769	1	1100600			3517	17250	1704	1716	4352	4352					0.12251671951298704
EALKRDVEAK	10	Unmodified	_EALKRDVEAK_					0	0	0			REV__ENSG00000078814|ENST00000262873|MYH7B	REV__ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8267089724541	2	579.827495	1157.64044	0.52182	0.00030257	-0.10429	-6.0472E-05	0.41753	0.0002421	579.8273278171765	18.639	0.39403	19.618	19.44	19.834	0.97922					30	13	3	0	0	0	0.88579	1	7818	7818		2.9952	0	1	3936800	+		3518	8792	1705	1717	4353	4353					0.06792184563460069
EALTKRTF	8	Unmodified	_EALTKRTF_					0	0	0			REV__ENST00000462159.1_1_1:100573356-100598412:-|nuORF	REV__ENST00000462159.1_1_1:100573356-100598412:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.5186340212822	3	322.51867	964.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.902	1	11.991	11.491	12.491	0.089381								0	0	0	1.0178	1	4940	4940		8.7454	0	1		+		3519	10524	1706	1718	4354	4354					0.05049473788812975
EAMKEVVPEMK	11	Unmodified	_EAMKEVVPEMK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8891174197197	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.88	1	114.03	113.53	114.53	0.14912								0	0	0	0.63775	1	49287	49287		0.08335	0	1				3520	3425	1707	1719	4355	4355					0.0027121603402520122
EAMTDIITL	9	Unmodified	_EAMTDIITL_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7613403201103	2	503.759901	1005.50525	2.2995	0.0011584	-1.8126	-0.00091314	0.48683	0.00024525	503.7595052712239	70.011	0.35422	71.849	71.687	72.041	1.8378					30	10	4	0	0	0	0.19075	1	29372	29372		34.102	12.356	1	1611300			3521	1695	1708	1720	4356	4356					0.002715683775022626
EAMTDIITL	9	Unmodified	_EAMTDIITL_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	503.759901	1005.50525	3.1688	0.0015963	-1.7313	-0.00087216	1.4375	0.00072415	503.759228137251	70.493	0.35413	71.847	71.648	72.002	1.3536	-0.0008509	3.3824E-05	NaN	34.102	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1702800			3522	1695	1708	1720							0.002715683775022626
EANAISVEL	9	Unmodified	_EANAISVEL_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000130294|Q12756|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	945.4914428591728	1	945.488753	944.481476	1.584	0.0014977	0.63509	0.00060047	2.2191	0.0020981	945.4891438053675	49.344	0.40067	50.735	50.548	50.948	1.3911					26	12	3	0	0	0	0.015029	2	20672	20622;20672		103.35	27.593	1	1806600			3523	7821	1709	1721	4357;4358	4358					0.00701470935348425
EANAISVEL	9	Unmodified	_EANAISVEL_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000130294|Q12756|KIF1A;ENSG00000130294|ENST00000498729|KIF1A;nc|ENSG00000130294|Q12756-2|KIF1A;ENSG00000054523|ENST00000676179|KIF1B;nc|ENSG00000054523|O60333-4|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.4915649294853	1	945.488753	944.481476	2.0768	0.0019636	-0.2758	-0.00026077	1.801	0.0017028	945.4888646568169	48.854	0.37057	50.831	50.637	51.008	1.9772					24	11	3	0	0	0	0.04145	2	20473	20426;20473		74.929	23.395	1	1848200			3524	7821	1709	1721	4359;4360	4360					0.00701470935348425
EAPKVSRSL	9	Unmodified	_EAPKVSRSL_					0	0	0		ENSG00000170260|ENST00000335870|ZNF212	ENSG00000170260|ENST00000335870|ZNF212	ENSG00000170260|ENST00000335870|ZNF212	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7890502810478	2	493.785099	985.555644	2.3386	0.0011548	3.058	0.00151	5.3966	0.0026647	493.7867401994926	40.681	0.64907	42.007	41.592	42.241	1.3254					47	20	4	0	0	0	0.24063	2	17004	16940;17004		28.487	10.352	1	11777000			3525	4134	1710	1722	4361;4362	4362					0.06228858817530636
EAPKVSRSL	9	Unmodified	_EAPKVSRSL_					0	0	0		ENSG00000170260|ENST00000335870|ZNF212	ENSG00000170260|ENST00000335870|ZNF212	ENSG00000170260|ENST00000335870|ZNF212	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7876464724541	2	493.785099	985.555644	2.0758	0.001025	2.2693	0.0011206	4.3451	0.0021456	493.78632380807704	40.259	0.65268	42.122	41.738	42.39	1.8624					43	20	3	0	0	0	0.24063	1	16800	16800		28.487	10.352	1	8700800			3526	4134	1710	1722	4363	4363					0.06228858817530636
EAQADTTTD	9	Unmodified	_EAQADTTTD_					0	0	0			REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.1986266970634	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4757	1	9.1122	8.6122	9.6122	0.63651								0	0	0	0.42693	1	3516	3516		0	0	1		+		3527	15208	1711	1723	4364	4364					-0.0942917710040092
EAQADTTTD	9	Unmodified	_EAQADTTTD_					0	0	0			REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.1985961794853	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.664	1	9.3005	8.8005	9.8005	0.63651								0	0	0	0.42693	1	3597	3597		0	0	1		+		3528	15208	1711	1723	4365	4365					-0.0942917710040092
EAQADTTTD	9	Unmodified	_EAQADTTTD_					0	0	0			REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.1984741091728	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2848	1	9.9354	9.4354	10.435	0.65058								0	0	0	0.42693	1	3857	3857		0	0	1		+		3529	15208	1711	1723	4366	4366					-0.0942917710040092
EAQADTTTD	9	Unmodified	_EAQADTTTD_					0	0	0			REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	REV__tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1987182497978	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.95	1	111.11	110.61	111.61	0.15038								0	0	0	0.42693	1	48101	48101		0	0	1		+		3530	15208	1711	1723	4367	4367					-0.0942917710040092
EAQERFSHIF	10	Unmodified	_EAQERFSHIF_					0	0	0			REV__tr|A0A7D7A1N6|A0A7D7A1N6_9CLOTPrkAfamilyserineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05020PE=4SV=1	REV__tr|A0A7D7A1N6|A0A7D7A1N6_9CLOTPrkAfamilyserineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05020PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2120849490166	3	421.875405	1262.60439	0.74929	0.0003161	1.7137	0.00072297	2.463	0.0010391	422.20958572095975	37.129	0.35398	38.95	38.771	39.125	1.8202					20	14	2	0	0	0	0.89422	1	15553	15553		2.086	0.34373	1	1485900	+		3531	15831	1712	1724	4368	4368					-0.01641272613392175
EARIEVLVGLL	11	Unmodified	_EARIEVLVGLL_					0	0	0			REV__PCDHGA4|p.T135Ifs*25|1|0.1|ENSG00000262576|chr5:141355510-141355511|-/TTCC|frameshift_variant	REV__PCDHGA4|p.T135Ifs*25|1|0.1|ENSG00000262576|chr5:141355510-141355511|-/TTCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3710815310478	2	606.371538	1210.72852	2.6989	0.0016366	-3.0143	-0.0018278	-0.31538	-0.00019124	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	1.0214	1	31905	31905		2.4985	1.0166	1	6855700	+		3532	11990	1713	1725	4369	4369					0.13158805154080255
EARKVKRLH	9	Unmodified	_EARKVKRLH_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.5721008181572	3	379.57188	1135.69381	1.8052	0.00068521	-0.98252	-0.00037294	0.8227	0.00031227	379.5713599271304	78.332	0.33411	79.599	79.421	79.755	1.2668					19	10	2	0	0	0	0.847	1	32888	32888		0.96228	0.26461	1	1265900			3533	532	1714	1726	4370	4370					0.1313902685665198
EARRDHVG	8	Unmodified	_EARRDHVG_					0	0	0			REV__ENSG00000105472|ENST00000250340|CLEC11A	REV__ENSG00000105472|ENST00000250340|CLEC11A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	939.4760009646416	1	939.475503	938.468226	1.1566	0.0010866	-3.1836	-0.002991	-2.027	-0.0019043	939.4753799686004	103.67	0.11521	103.67	103.6	103.71	0					22	5	5	0	0	0	0.88587	1	43577	43577		5.2307	2.3415	1	31282000	+		3534	9174	1715	1727	4371	4371					-0.0034692233338091683
EARRREIRDKL	11	Unmodified	_EARRREIRDKL_					0	0	0			REV__nc|ENSG00000118194|P45379-7|TNNT2	REV__nc|ENSG00000118194|P45379-7|TNNT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	481.2852661013603	3	481.283057	1440.82734	5.8178	0.0028	-0.58257	-0.00028038	5.2353	0.0025196	481.6175598914164	88.967	0.77485	90.023	89.723	90.498	1.0562					36	23	2	0	0	0	0.14606	1	37576	37576		0	0	1	1354200	+		3535	9514	1716	1728	4372	4372					0.12456221171669313
EASDLIIKL	9	Unmodified	_EASDLIIKL_					0	0	0		ENST00000441107.5_1_6:149982867-150018260:-|nuORF;ENSG00000131023|ENST00000543571|LATS1	ENST00000441107.5_1_6:149982867-150018260:-|nuORF	ENST00000441107.5_1_6:149982867-150018260:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2980529665947	2	501.297507	1000.58046	1.3305	0.00066698	1.5805	0.00079231	2.911	0.0014593	501.2982036122734	55.427	0.26423	56.836	56.586	56.85	1.4099					15	8	2	0	0	0	0.057024	1	23200	23200		65.235	10.461	1	3952100			3536	2476	1717	1729	4373	4373					0.08019493900224006
EASGGGGSR	9	Unmodified	_EASGGGGSR_					0	0	0			REV__ENST00000354567.6_1_1:77747755-77747866:+|nuORF	REV__ENST00000354567.6_1_1:77747755-77747866:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.1811706423759	2	389.177924	776.341294	2.7498	0.0010702	1.9529	0.00076003	4.7027	0.0018302	389.17913003870916	108.48	0.23705	108.53	108.4	108.64	0.050644					54	13	5	0	0	0	0.83753	1	46675	46675		1.8442	1.1539	1	129700000	+		3537	12538	1718	1730	4374	4374					-0.055822682783741584
EASPIALKL	9	Unmodified	_EASPIALKL_					0	0	0		ENST00000429060.1_1_6:8784460-8785356:+|nuORF	ENST00000429060.1_1_6:8784460-8785356:+|nuORF	ENST00000429060.1_1_6:8784460-8785356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2861205935478	2	471.286943	940.559333	2.5311	0.0011929	-2.3562	-0.0011104	0.17489	8.2422E-05	471.2858344062144	47.61	0.3498	48.993	48.792	49.142	1.3825					18	10	3	0	0	0	0.17276	1	19929	19929		36.127	12.979	1	1373300			3538	6485	1719	1731	4375	4375					0.08667528591354312
EASPIALKL	9	Unmodified	_EASPIALKL_					0	0	0		ENST00000429060.1_1_6:8784460-8785356:+|nuORF	ENST00000429060.1_1_6:8784460-8785356:+|nuORF	ENST00000429060.1_1_6:8784460-8785356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2838317751884	2	471.286943	940.559333	2.7459	0.0012941	-3.412	-0.001608	-0.66614	-0.00031395	471.28485995574346	47.103	0.37703	49.079	48.934	49.311	1.976					18	11	3	0	0	0	0.11643	1	19723	19723		43.858	18.459	1	1471800			3539	6485	1719	1731	4376	4376					0.08667528591354312
EASRNSGG	8	Unmodified	_EASRNSGG_					0	0	0			REV__ENST00000450119.1_1_10:92813377-92813905:+|nuORF	REV__ENST00000450119.1_1_10:92813377-92813905:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.1803771853447	2	389.177924	776.341294	2.7498	0.0010702	1.9529	0.00076003	4.7027	0.0018302	389.17913003870916	108.48	0.23705	108.53	108.4	108.64	0.050644					54	13	5	0	0	0	0.89178	1	46613	46613		0.69038	0	1	129700000	+		3540	8872	1720	1732	4377	4377					-0.0558226827836279
EATFCCCCCC	10	Unmodified	_EATFCCCCCC_					0	0	0			REV__ENST00000318348.8_1_12:110289098-110289272:-|nuORF	REV__ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.4688598513603	2	543.138012	1084.26147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.105	1	10.105	9.6046	10.605	0								0	0	0	0.66264	1	4164	4164		0	0	1		+		3541	12395	1721	1733	4378	4378					-0.277289449180671
EAVACMKC	8	Unmodified	_EAVACMKC_					0	0	0			REV__ENST00000455852.1_1_2:85828554-85830202:-|nuORF	REV__ENST00000455852.1_1_2:85828554-85830202:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3588744997978	1	854.356892	853.349616	3.0954	0.0026446	1.1243	0.00096057	4.2197	0.0036051	854.357755707468	98.176	0.20173	98.432	98.332	98.534	0.25636					13	6	3	0	0	0	0.88587	1	41349	41349		5.2307	0.47466	1	52005000	+		3542	13164	1722	1734	4379	4379					-0.08292496949275119
ECCPRNKSRK	10	Unmodified	_ECCPRNKSRK_					0	0	0			REV__ENST00000604426.5_1_12:51777293-51786582:-|nuORF	REV__ENST00000604426.5_1_12:51777293-51786582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	610.8034545779228	2	610.802974	1219.59139	2.2945	0.0014015	-0.56261	-0.00034364	1.7319	0.0010578	610.8026770635731	47.138	0.57241	47.138	46.926	47.499	0					47	17	4	0	0	0	0.78468	1	19653	19653		13.906	1.3745	1	9173400	+		3543	14126	1723	1735	4380	4380					-0.00961750268788819
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0963622927666	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.312	1	23.545	23.045	24.045	0.23306								0	0	0	1.0178	1	9721	9721		0	0	1				3544	6019	1724	1736	4381	4381					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0973083376884	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.434	1	49.765	49.265	50.265	0.33019								0	0	0	1.0178	1	20719	20719		0	0	1				3545	6019	1724	1736	4382	4382					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0969116091728	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.617	1	49.947	49.447	50.447	0.33019								0	0	0	1.0178	1	20792	20792		0	0	1				3546	6019	1724	1736	4383	4383					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0962707400322	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.747	1	50.078	49.578	50.578	0.33019								0	0	0	1.0178	1	20845	20845		0	0	1				3547	6019	1724	1736	4384	4384					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0972778201103	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.897	1	50.228	49.728	50.728	0.33019								0	0	0	1.0178	1	20907	20907		0	0	1				3548	6019	1724	1736	4385	4385					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0965148806572	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.864	1	55.185	54.685	55.685	0.32088								0	0	0	1.0178	1	22975	22975		0	0	1				3549	6019	1724	1736	4386	4386					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0967285037041	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.972	1	70.294	69.794	70.794	0.32224								0	0	0	1.0178	1	29284	29284		0	0	1				3550	6019	1724	1736	4387	4387					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0975829958916	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.772	1	80.072	79.572	80.572	0.30047								0	0	0	1.0178	1	33350	33350		0	0	1				3551	6019	1724	1736	4388	4388					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0971252322197	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.937	1	80.237	79.737	80.737	0.30047								0	0	0	1.0178	1	33418	33418		0	0	1				3552	6019	1724	1736	4389	4389					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0966979861259	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.153	1	80.453	79.953	80.953	0.30047								0	0	0	1.0178	1	33507	33507		0	0	1				3553	6019	1724	1736	4390	4390					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.0970031619072	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.863	1	91.072	90.572	91.572	0.20904								0	0	0	1.0178	1	38069	38069		0	0	1				3554	6019	1724	1736	4391	4391					-0.20814858467929298
ECCWSCTD	8	Unmodified	_ECCWSCTD_					0	0	0		ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	ENST00000359373.9_1_11:72443606-72503979:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.0955688357353	3	316.096168	945.266674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.548	1	50.525	50.025	51.025	1.9772								0	0	0	1.0178	1	20335	20335		0	0	1				3555	6019	1724	1736	4392	4392					-0.20814858467929298
ECEDEEGC	8	Unmodified	_ECEDEEGC_					0	0	0			REV__ENST00000563741.5_1_16:1828298-1832574:-|nuORF	REV__ENST00000563741.5_1_16:1828298-1832574:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	305.0897704958916	3	305.089847	912.247713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.897	1	54.897	54.397	55.397	0								0	0	0	1.0178	1	22872	22872		0	0	1		+		3556	13916	1725	1737	4393	4393					-0.2119211655798381
ECLQGSYGEAC	11	Unmodified	_ECLQGSYGEAC_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	387.1518432497978	3	387.15133	1158.43216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.768	1	65.175	64.675	65.675	1.4071								0	0	0	0.63775	1	26747	26747		0.45452	0.046251	1		+		3557	11528	1726	1738	4394	4394					-0.1407192840740663
ECPCCYEYD	9	Unmodified	_ECPCCYEYD_					0	0	0			REV__ENSG00000178295|ENST00000381254|GEN1	REV__ENSG00000178295|ENST00000381254|GEN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.6718017458916	2	562.672111	1123.32967	1.4671	0.00082548	0.041398	2.3293E-05	1.5085	0.00084877	562.6720117517702	45.203	0.47259	45.203	44.996	45.468	0					32	14	3	0	0	0	0.85403	1	18988	18988		0	0	1	3696800	+		3558	11244	1727	1739	4395	4395					-0.22706337470549443
ECQGPGVRTDF	11	Unmodified	_ECQGPGVRTDF_					0	0	0		nc|ENSG00000115839|Q15042-4|RAB3GAP1;ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1	nc|ENSG00000115839|Q15042-4|RAB3GAP1	nc|ENSG00000115839|Q15042-4|RAB3GAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7736694216728	2	604.771862	1207.52917	1.7315	0.0010472	0.56251	0.00034019	2.294	0.0013874	604.7723720165205	48.905	2.3989	50.293	49.458	51.857	1.388					165	76	3	0	0	0	0.91768	1	20827	20827		8.7454	0.15213	1	3832500			3559	1939	1728	1740	4396	4396					-0.06629198136124614
ECQGPGVRTDF	11	Unmodified	_ECQGPGVRTDF_					0	0	0		nc|ENSG00000115839|Q15042-4|RAB3GAP1;ENSG00000115839|ENST00000264158|RAB3GAP1;nc|ENSG00000115839|Q15042-3|RAB3GAP1	nc|ENSG00000115839|Q15042-4|RAB3GAP1	nc|ENSG00000115839|Q15042-4|RAB3GAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7726318240166	2	604.771862	1207.52917	2.028	0.0012265	0.54163	0.00032756	2.5697	0.0015541	604.7723106840883	48.387	1.5749	50.364	49.837	51.412	1.9772					138	50	3	0	0	0	0.91768	1	20646	20646		8.7454	1.4562	1	4746800			3560	1939	1728	1740	4397	4397					-0.06629198136124614
ECQSFQLNDNK	11	Unmodified	_ECQSFQLNDNK_					0	0	0			REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	REV__nc|ENSG00000112339|Q9Y450-2|HBS1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.5327941775322	3	442.531198	1324.57176	1.3691	0.00060588	2.5159	0.0011134	3.885	0.0017192	442.532544263757	25.736	0.33763	25.988	25.827	26.165	0.25197					22	10	3	0	0	0	1.0084	1	10758	10758		1.3296	0.21989	1	603340	+		3561	14409	1729	1741	4398	4398					-0.07753847798539937
EDARKINPAF	10	Unmodified	_EDARKINPAF_					0	0	0			REV__tr|A0A553SP50|A0A553SP50_NIACIMethionyl-tRNAformyltransferaseOS=NialliacirculansOX=1397GN=fmtPE=3SV=1	REV__tr|A0A553SP50|A0A553SP50_NIACIMethionyl-tRNAformyltransferaseOS=NialliacirculansOX=1397GN=fmtPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1277343630791	3	387.540134	1159.59857	0.59646	0.00023115	2.7278	0.0010571	3.3243	0.0012883	387.5411616044648	23.314	0.18361	24.528	24.443	24.627	1.2145					7	5	2	0	0	0	0.12542	1	9749	9749		0.13989	0	1	178270	+		3562	15072	1730	1742	4399	4399					0.02515628874948561
EDARKINPAF	10	Unmodified	_EDARKINPAF_					0	0	0			REV__tr|A0A553SP50|A0A553SP50_NIACIMethionyl-tRNAformyltransferaseOS=NialliacirculansOX=1397GN=fmtPE=3SV=1	REV__tr|A0A553SP50|A0A553SP50_NIACIMethionyl-tRNAformyltransferaseOS=NialliacirculansOX=1397GN=fmtPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1279479861259	3	387.540134	1159.59857	0.31642	0.00012263	3.3103	0.0012829	3.6267	0.0014055	387.5417436530313	22.959	0.15702	24.61	24.498	24.655	1.6511					8	4	2	0	0	0	0.12542	1	9578	9578		0.13989	0	1	197580	+		3563	15072	1730	1742	4400	4400					0.02515628874948561
EDCHCSEC	8	Unmodified	_EDCHCSEC_					0	0	0			REV__ENSG00000130528|ENST00000252825|HRC	REV__ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_A02_02	2	463.1300231814384	2	463.12787	924.241188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.27	1	107.32	106.82	107.82	0.052452								0	0	0	1.0178	1	45850	45850		0	0	1		+		3564	9788	1731	1743	4401	4401					-0.2239633299035404
EDCRYSKQ	8	Unmodified	_EDCRYSKQ_					0	0	0			REV__ENSG00000196345|ENST00000426540|ZKSCAN7	REV__ENSG00000196345|ENST00000426540|ZKSCAN7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.7270995974541	2	514.726923	1027.43929	0.70555	0.00036316	0.48178	0.00024799	1.1873	0.00061115	514.7274491800571	56.298	0.29741	57.708	57.606	57.903	1.4099					12	9	2	0	0	0	0.86113	1	23602	23602		15.847	3.6065	1	3236100	+		3565	11628	1732	1744	4402	4402					-0.07332827744698989
EDDDDDDDDSS	11	Unmodified	_EDDDDDDDDSS_					0	0	0		ENSG00000118096|ENST00000264021|IFT46;ENST00000531201.5_1_11:118415633-118427808:-|nuORF;nc|ENSG00000118096|Q9NQC8-2|IFT46	ENSG00000118096|ENST00000264021|IFT46	ENSG00000118096|ENST00000264021|IFT46	MSMS	GG20161007_CRH_Patient100_A02_01	1	621.6781494021416	2	621.673656	1241.33276	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.381	1	34.381	33.881	34.881	0								0	0	0	0.63775	1	14411	14411		0	0	1				3566	2029	1733	1745	4403	4403					-0.27825421077477586
EDDDEDDDPYD	11	Unmodified	_EDDDEDDDPYD_					0	0	0			REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	MSMS	GG20161007_CRH_Patient100_W632_02	4	672.0977661013603	2	671.707499	1341.40044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.65	1	102.83	102.33	103.33	0.18066								0	0	0	0.63775	1	43186	43186		1.3295	0	1		+		3567	9006	1734	1746	4404	4404					-0.25659971146683347
EDDDFDYF	8	Unmodified	_EDDDFDYF_					0	0	0			REV__tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	REV__tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1906005740166	2	533.18782	1064.36109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.44	1	54.84	54.34	55.34	1.4005								0	0	0	1.0178	1	22365	22365		2.8892	0.31174	1		+		3568	15511	1735	1747	4405	4405					-0.16851981848935793
EDDEENTNK	9	Unmodified	_EDDEENTNK_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.3565551638603	2	547.21764	1092.42073	4.5497	0.0024897	-3.7897	-0.0020738	0.76002	0.00041589	547.2156283125211	89.415	0.53008	90.82	90.52	91.05	1.4045					34	16	3	0	0	0	0.11749	1	37613	37613		6.7232	5.0705	1	844970	+		3569	8555	1736	1748	4406	4406					-0.1217871090555036
EDDGEMVP	8	Unmodified	_EDDGEMVP_					0	0	0		ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43-12|PDE4DIP;nc|ENSG00000178104|Q5VU43-8|PDE4DIP;nc|ENSG00000178104|Q5VU43-9|PDE4DIP;PDE4DIP|p.R419Vfs*21|1|0.19|ENSG00000178104|chr1:148965542-148965542|T/-|frameshift_variant	ENSG00000178104|ENST00000695795|PDE4DIP	ENSG00000178104|ENST00000695795|PDE4DIP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	446.8936035037041	2	446.173658	890.332763	0.66146	0.00029513	-4.2109	-0.0018788	-3.5495	-0.0015837	446.17107007331145	12.023	0.44015	12.112	11.867	12.307	0.089381					18	13	2	0	0	0	2.3239	1	4923	4923		10.183	1.5901	1	1399200			3570	4473	1737	1749	4407	4407					-0.11679003029871637
EDEDEDDSPPC	11	Unmodified	_EDEDEDDSPPC_					0	0	0		ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.4719421267509	3	417.471562	1249.39286	-0.53218	-0.00022217	0.28271	0.00011802	-0.24948	-0.00010415	417.47198853433605	12.761	1.5718	12.761	12.377	13.949	0					87	50	4	0	0	0	1.0362	2	5261	5261;5313		1.3296	1.1703	1	8539000			3571	7520	1738	1750	4408;4409	4408					-0.22186401947942613
EDEDEDDSPPC	11	Unmodified	_EDEDEDDSPPC_					0	0	0		ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.3551818728447	4	313.355491	1249.39286	-3.509	-0.0010996	2.5085	0.00078604	-1.0005	-0.00031352	313.35622012041597	12.761	0.64722	12.761	12.467	13.115	0					43	20	3	0	0	0	1.039	1	5289	5289		0.45452	0.29519	1	1267900			3572	7520	1738	1750	4410	4410					-0.22186401947942613
EDEDEDDSPPC	11	Unmodified	_EDEDEDDSPPC_					0	0	0		ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	417.471562	1249.39286	0.44232	0.00018466	-1.1334	-0.00047318	-0.69112	-0.00028852	417.4713048239062	12.697	1.0571	12.786	12.493	13.55	0.089381	-0.057896	-0.00059681	NaN	1.3296	66	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1965300			3573	7520	1738	1750							-0.22186401947942613
EDEDEDDSPPC	11	Unmodified	_EDEDEDDSPPC_					0	0	0		ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	417.471562	1249.39286	-0.3607	-0.00015058	-0.75621	-0.0003157	-1.1169	-0.00046628	417.4715833264145	12.258	0.65059	12.952	12.696	13.346	0.69396	0.10786	-0.00012435	NaN	1.3296	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1100600			3574	7520	1738	1750							-0.22186401947942613
EDEDEDDSPPC	11	Unmodified	_EDEDEDDSPPC_					0	0	0		ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	ENST00000596243.5_1_19:50382536-50391878:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	417.471562	1249.39286	0.060365	2.5201E-05	-1.2634	-0.00052743	-1.203	-0.00050223	417.4714223990967	12.09	0.40486	12.877	12.66	13.065	0.78751	0.033384	-0.00075956	NaN	1.3296	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669410			3575	7520	1738	1750							-0.22186401947942613
EDEDEEEPQAK	11	Unmodified	_EDEDEEEPQAK_					0	0	0			REV__nc|ENSG00000119321|Q5T1M5-2|FKBP15	REV__nc|ENSG00000119321|Q5T1M5-2|FKBP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.1833984255791	3	440.180888	1317.52083	0.173	7.6149E-05	3.8091	0.0016767	3.9821	0.0017529	440.5165632741736	13.434	0.52852	14.161	13.882	14.411	0.72639					44	16	4	0	0	0	1.0084	1	5545	5545		1.3296	0	1	1809900	+		3576	9535	1739	1751	4411	4411					-0.12522518362425217
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1421081423759	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.241	1	51.241	50.741	51.741	0								0	0	0	0.63775	1	21370	21370		0	0	1				3577	3981	1740	1752	4412	4412					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1447631716728	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.45	1	40.762	40.262	41.262	0.31263								0	0	0	0.63775	1	17005	17005		0	0	1				3578	3981	1740	1752	4413	4413					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1476928591728	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.949	1	48.279	47.779	48.779	0.33034								0	0	0	0.63775	1	20109	20109		0	0	1				3579	3981	1740	1752	4414	4414					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1462585330009	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.63	1	67.952	67.452	68.452	0.32269								0	0	0	0.63775	1	28315	28315		0	0	1				3580	3981	1740	1752	4415	4415					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1456481814384	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.585	1	95.708	95.208	96.208	0.12331								0	0	0	0.63775	1	39999	39999		0	0	1				3581	3981	1740	1752	4416	4416					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1440917849541	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.826	1	16.653	16.153	17.153	0.82643								0	0	0	0.63775	1	6579	6579		0	0	1				3582	3981	1740	1752	4417	4417					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1467773318291	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.823	1	17.721	17.221	18.221	0.89794								0	0	0	0.63775	1	6999	6999		0	0	1				3583	3981	1740	1752	4418	4418					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1470825076103	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.489	1	73.819	73.319	74.319	1.3297								0	0	0	0.63775	1	30425	30425		0	0	1				3584	3981	1740	1752	4419	4419					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1438781619072	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8301	1	10.575	10.075	11.075	0.74462								0	0	0	0.63775	1	4093	4093		0	0	1				3585	3981	1740	1752	4420	4420					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1448547244072	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.922	1	16.962	16.462	17.462	1.0392								0	0	0	0.63775	1	6609	6609		0	0	1				3586	3981	1740	1752	4421	4421					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1465331912041	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.159	1	61.128	60.628	61.628	1.969								0	0	0	0.63775	1	24819	24819		0	0	1				3587	3981	1740	1752	4422	4422					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1456176638603	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.398	1	62.364	61.864	62.864	1.9653								0	0	0	0.63775	1	25344	25344		0	0	1				3588	3981	1740	1752	4423	4423					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1463500857353	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.9	1	65.828	65.328	66.328	1.928								0	0	0	0.63775	1	26810	26810		0	0	1				3589	3981	1740	1752	4424	4424					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1466552615166	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.028	1	65.956	65.456	66.456	1.928								0	0	0	0.63775	1	26864	26864		0	0	1				3590	3981	1740	1752	4425	4425					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1458618044853	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.565	1	66.493	65.993	66.993	1.928								0	0	0	0.63775	1	27085	27085		0	0	1				3591	3981	1740	1752	4426	4426					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1472045779228	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.147	1	73.957	73.457	74.457	1.8101								0	0	0	0.63775	1	30270	30270		0	0	1				3592	3981	1740	1752	4427	4427					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1466247439384	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.389	1	74.199	73.699	74.699	1.8101								0	0	0	0.63775	1	30372	30372		0	0	1				3593	3981	1740	1752	4428	4428					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1458007693291	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.532	1	75.328	74.828	75.828	1.7962								0	0	0	0.63775	1	30844	30844		0	0	1				3594	3981	1740	1752	4429	4429					-0.26199061709939997
EDEEDDEEMED	11	Unmodified	_EDEEDDEEMED_					0	0	0		ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	ENSG00000167625|ENST00000301215|ZNF526	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1463500857353	3	462.145403	1383.41438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.678	1	75.474	74.974	75.974	1.7962								0	0	0	0.63775	1	30906	30906		0	0	1				3595	3981	1740	1752	4430	4430					-0.26199061709939997
EDEGPHPG	8	Unmodified	_EDEGPHPG_					0	0	0		RRP1B|p.K182Efs*48|1|0.05|ENSG00000160208|chr21:43675151-43675152|-/G|frameshift_variant;ENST00000340648.5_1_21:45096190-45096685:+|nuORF	RRP1B|p.K182Efs*48|1|0.05|ENSG00000160208|chr21:43675151-43675152|-/G|frameshift_variant	RRP1B|p.K182Efs*48|1|0.05|ENSG00000160208|chr21:43675151-43675152|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.1739379763603	2	419.172307	836.330061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.738	1	99.963	99.463	100.46	0.22545								0	0	0	1.0178	1	41952	41952		0.79363	0	1				3596	15947	1741	1753	4431	4431					-0.09465090372509621
EDELFLPHFWE	11	Unmodified	_EDELFLPHFWE_					0	0	0			REV__ENSG00000001036|ENST00000002165|FUCA2	REV__ENSG00000001036|ENST00000002165|FUCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2283508181572	3	487.894354	1460.66123	0.098123	4.7874E-05	-1.2403	-0.00060514	-1.1422	-0.00055727	487.8935177633813	11.876	0.40358	12.664	12.409	12.813	0.78751					32	12	4	0	0	0	0.97905	1	4904	4904		5.0475	2.2042	1	1505500	+		3597	8477	1742	1754	4432	4432					-0.05067269847518219
EDELFLPHFWE	11	Unmodified	_EDELFLPHFWE_					0	0	0			REV__ENSG00000001036|ENST00000002165|FUCA2	REV__ENSG00000001036|ENST00000002165|FUCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	487.894354	1460.66123	0.41349	0.00020174	-2.9858	-0.0014567	-2.5723	-0.001255	487.8932813972036	12.276	0.34187	12.276	12.096	12.438	0	-0.2424	-0.00086588	NaN	5.0475	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	801450	+		3598	8477	1742	1754							-0.05067269847518219
EDELFLPHFWE	11	Unmodified	_EDELFLPHFWE_					0	0	0			REV__ENSG00000001036|ENST00000002165|FUCA2	REV__ENSG00000001036|ENST00000002165|FUCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	487.894354	1460.66123	0.89736	0.00043782	-3.3467	-0.0016328	-2.4493	-0.001195	487.8926696346615	12.38	0.40408	12.47	12.182	12.586	0.089381	-0.049079	-0.0013941	NaN	5.0475	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1252000	+		3599	8477	1742	1754							-0.05067269847518219
EDELFLPHFWE	11	Unmodified	_EDELFLPHFWE_					0	0	0			REV__ENSG00000001036|ENST00000002165|FUCA2	REV__ENSG00000001036|ENST00000002165|FUCA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	487.894354	1460.66123	-0.19174	-9.355E-05	-2.0218	-0.00098642	-2.2135	-0.00108	487.8926327808143	11.971	0.40347	12.665	12.417	12.82	0.69396	0.14636	0.00054507	NaN	5.0475	34	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1014500	+		3600	8477	1742	1754							-0.05067269847518219
EDFEQKYNFRF	11	Unmodified	_EDFEQKYNFRF_					0	0	0		ENSG00000129347|ENST00000312962|KRI1;ENST00000537363.5_1_19:10670171-10670590:-|nuORF;ENST00000478863.5_1_19:10666000-10676642:-|nuORF	ENSG00000129347|ENST00000312962|KRI1	ENSG00000129347|ENST00000312962|KRI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2369567751884	3	508.236891	1521.68884	1.4367	0.00073019	-0.27683	-0.00014069	1.1599	0.00058949	508.237657905328	21.948	0.29862	23.125	23.052	23.35	1.177					13	9	2	0	0	0	1.0369	1	9178	9178		1.1098	0	1	784890			3601	2400	1743	1755	4433	4433					-0.051133665873067
EDFYEREEKYI	11	Unmodified	_EDFYEREEKYI_					0	0	0			REV__ENSG00000162627|ENST00000306121|SNX7	REV__ENSG00000162627|ENST00000306121|SNX7	MSMS	GG20161007_CRH_Patient100_W632_01	3	760.7244750857353	2	760.848821	1519.68309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.772	1	98.97	98.47	99.47	0.19767								0	0	0	0.63775	1	41585	41585		4.5289	1.2476	1		+		3602	10652	1744	1756	4434	4434					-0.05596509889619483
EDFYKVDTTYR	11	Unmodified	_EDFYKVDTTYR_					0	0	0		tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.5632507205009	3	479.561263	1435.66196	2.2688	0.001088	2.0173	0.00096743	4.2862	0.0020555	479.5624004893906	47.941	0.46998	47.941	47.622	48.092	0					47	14	4	0	0	0	0.92747	3	20025	19975;20025;20076		4.1166	1.6818	1	4293900			3603	16417	1745	1757	4435;4436;4437	4436					-0.038444751985025505
EDFYKVDTTYR	11	Unmodified	_EDFYKVDTTYR_					0	0	0		tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.5634033083916	3	479.561263	1435.66196	2.5531	0.0012244	1.73	0.00082966	4.2832	0.002054	479.56226219325816	47.921	0.44817	48.251	48.046	48.494	0.33034					34	14	3	0	0	0	0.98155	2	20110	20062;20110		2.2527	0.92309	1	2491400			3604	16417	1745	1757	4438;4439	4439					-0.038444751985025505
EDFYKVDTTYR	11	Unmodified	_EDFYKVDTTYR_					0	0	0		tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.5631286501884	3	479.561263	1435.66196	1.8453	0.00088495	1.4321	0.00068678	3.2774	0.0015717	479.56249113049984	46.453	0.43331	47.828	47.617	48.051	1.3751					30	13	3	0	0	0	0.92747	1	19501	19501		6.6235	5.4086	1	2223000			3605	16417	1745	1757	4440	4440					-0.038444751985025505
EDFYKVDTTYR	11	Unmodified	_EDFYKVDTTYR_					0	0	0		tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	tr|A0A553SNF5|A0A553SNF5_NIACIPhagetailproteinIOS=NialliacirculansOX=1397GN=CEQ21_24365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.5658447146416	3	479.561263	1435.66196	1.2049	0.00057781	3.0944	0.001484	4.2993	0.0020618	479.56285290904924	46.008	0.46043	47.978	47.758	48.219	1.9703					29	14	3	0	0	0	0.98155	2	19250	19250;19302		2.2527	0	1	1901200			3606	16417	1745	1757	4441;4442	4441					-0.038444751985025505
EDGDSDDD	8	Unmodified	_EDGDSDDD_					0	0	0		ENST00000479978.5_1_22:41615341-41623356:+|nuORF;nc|ENSG00000100395|Q969R5-2|L3MBTL2;nc|ENSG00000100395|Q969R5-3|L3MBTL2;ENST00000466589.5_1_22:41601366-41623356:+|nuORF;ENSG00000100395|ENST00000216237|L3MBTL2	ENST00000479978.5_1_22:41615341-41623356:+|nuORF	ENST00000479978.5_1_22:41615341-41623356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	868.1153442263603	1	867.248642	866.241365	2.3801	0.0020642	-1.2247	-0.0010621	1.1554	0.001002	867.2482992564735	84.586	0.095795	84.586	84.526	84.622	0					4	2	2	0	0	0	0.89008	1	35229	35229		2.5775	0	1	321690			3607	1272	1746	1758	4443	4443					-0.19710595193510017
EDGGTPQK	8	Unmodified	_EDGGTPQK_					0	0	0		nc|ENSG00000184226|Q9HC56-2|PCDH9;ENSG00000184226|ENST00000377865|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	nc|ENSG00000184226|Q9HC56-2|PCDH9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	416.1967651247978	2	416.195782	830.377011	-0.63343	-0.00026363	1.4642	0.00060939	0.83076	0.00034576	416.1962225218199	10.606	1.4535	10.606	10.059	11.513	0					69	46	2	0	0	0	0.83518	2	4306	4241;4306		18.135	0	1	695110			3608	4685	1747	1759	4444;4445	4445					-0.044962308213712276
EDLHVKHPRLL	11	Unmodified	_EDLHVKHPRLL_					0	0	0		nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.9314147830009	3	452.929733	1355.76737	2.6181	0.0011858	1.7695	0.00080145	4.3876	0.0019873	452.93070740143594	47.165	0.28281	49.141	48.999	49.282	1.976					19	8	3	0	0	0	1.0191	1	19724	19724		2.6312	0.88896	1	2072600			3609	2902	1748	1760	4446	4446					0.1037153050847337
EDLHVKHPRLL	11	Unmodified	_EDLHVKHPRLL_					0	0	0		nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;ENSG00000140199|ENST00000354181|SLC12A6;nc|ENSG00000140199|Q9UHW9-5|SLC12A6;nc|ENSG00000140199|Q9UHW9-6|SLC12A6;nc|ENSG00000140199|Q9UHW9-2|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	452.929733	1355.76737	2.548	0.001154	2.9089	0.0013175	5.4569	0.0024716	452.9306368507401	47.65	0.25301	49.033	48.858	49.111	1.3825	-0.054023	0.00091483	NaN	2.6312	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1174500			3610	2902	1748	1760							0.1037153050847337
EDLIMHGS	8	Unmodified	_EDLIMHGS_					0	0	0			REV__tr|A0A7D7AG91|A0A7D7AG91_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08285PE=4SV=1	REV__tr|A0A7D7AG91|A0A7D7AG91_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08285PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412231326103	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1842	1	2.9326	2.4326	3.4326	0.7484								0	0	0	1.0178	1	906	906		1.4819	1.0236	1		+		3611	15921	1749	1761	4447	4447					-0.053067136593540454
EDLLEDLEQA	10	Unmodified	_EDLLEDLEQA_					0	0	0		tr|A0A553SKH0|A0A553SKH0_NIACIBifunctionalcystathioninegamma-lyase/homocysteinedesulfhydraseOS=NialliacirculansOX=1397GN=CEQ21_18765PE=3SV=1	tr|A0A553SKH0|A0A553SKH0_NIACIBifunctionalcystathioninegamma-lyase/homocysteinedesulfhydraseOS=NialliacirculansOX=1397GN=CEQ21_18765PE=3SV=1	tr|A0A553SKH0|A0A553SKH0_NIACIBifunctionalcystathioninegamma-lyase/homocysteinedesulfhydraseOS=NialliacirculansOX=1397GN=CEQ21_18765PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7763549685478	2	587.777333	1173.54011	1.1009	0.00064707	-1.8314	-0.0010765	-0.73053	-0.00042939	587.7765183052592	27.663	0.92168	28.942	28.444	29.366	1.2789					80	29	4	0	0	0	0.80011	1	11706	11706		12.241	2.8575	1	7273400			3612	16289	1750	1762	4448	4448					-0.03971517280842818
EDLTIETNHA	10	Unmodified	_EDLTIETNHA_					0	0	0			REV__tr|A0A553SLL6|A0A553SLL6_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20740PE=4SV=1	REV__tr|A0A553SLL6|A0A553SLL6_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7751342654228	2	571.769842	1141.52513	3.3636	0.0019232	0.19827	0.00011337	3.5619	0.0020366	571.7694813145257	91.359	0.42755	92.725	92.535	92.963	1.366					30	13	3	0	0	0	0.41677	1	38470	38470		32.305	0	1	1740200	+		3613	14988	1751	1763	4449	4449					-0.03996964358157129
EDLTLILPV	9	Unmodified	_EDLTLILPV_					0	0	0			REV__TPCN1|p.L334Ffs*42|1|0.26|ENSG00000186815|chr12:113276977-113276978|-/TGAGACAGAGACTTGCTCTGTTGCCCAGGCTGTA|frameshift_variant	REV__TPCN1|p.L334Ffs*42|1|0.26|ENSG00000186815|chr12:113276977-113276978|-/TGAGACAGAGACTTGCTCTGTTGCCCAGGCTGTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9820434451103	3	338.202347	1011.58521	-0.15319	-5.1809E-05	0.90648	0.00030657	0.75329	0.00025476	338.2021582594617	27.456	0.49497	28.735	28.534	29.029	1.2789					19	15	2	0	0	0	0.11909	1	11461	11461		2.4985	0.65425	1	738090	+		3614	11513	1752	1764	4450	4450					0.0798837804301229
EDNMGNRILTK	11	Unmodified	_EDNMGNRILTK_					0	0	0			REV__tr|A0A7D6ZYD4|A0A7D6ZYD4_9CLOTGTP3',8-cyclaseOS=ClostridiumintestinaleOX=36845GN=moaAPE=3SV=1	REV__tr|A0A7D6ZYD4|A0A7D6ZYD4_9CLOTGTP3',8-cyclaseOS=ClostridiumintestinaleOX=36845GN=moaAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880798220634	3	430.887205	1289.63978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.561	1	15.33	14.83	15.83	0.76937								0	0	0	0.63775	1	6052	6052		1.1098	0	1		+		3615	15777	1753	1765	4451	4451					0.006550218520942508
EDNYSRSMTAF	11	Unmodified	_EDNYSRSMTAF_					0	0	0			REV__ENST00000463455.1_1_22:32804140-32808230:-|nuORF	REV__ENST00000463455.1_1_22:32804140-32808230:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.8571655154228	3	440.855682	1319.54522	0.10945	4.825E-05	0.5042	0.00022228	0.61364	0.00027053	440.8563196980084	12.267	0.86546	12.267	11.88	12.746	0					97	27	7	0	0	0	0.97491	1	4982	4982		2.4348	0	1	77527000	+		3616	13215	1754	1766	4452	4452					-0.10177536689866429
EDPGMVGY	8	Unmodified	_EDPGMVGY_					0	0	0			REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.1837951540947	2	434.181286	866.348019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.69	1	101.86	101.36	102.36	0.17032								0	0	0	1.0178	1	42785	42785		5.2307	0	1		+		3617	15874	1755	1767	4453	4453					-0.09050091442009034
EDPGMVGY	8	Unmodified	_EDPGMVGY_					0	0	0			REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.1812011599541	2	434.181286	866.348019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	102.14	101.64	102.64	0.17032								0	0	0	1.0178	1	42907	42907		5.2307	0	1		+		3618	15874	1755	1767	4454	4454					-0.09050091442009034
EDPLVEAIV	9	Unmodified	_EDPLVEAIV_					0	0	0			REV__tr|A0A553SJ97|A0A553SJ97_NIACICopper-exportingP-typeATPaseOS=NialliacirculansOX=1397GN=CEQ21_16430PE=3SV=1	REV__tr|A0A553SJ97|A0A553SJ97_NIACICopper-exportingP-typeATPaseOS=NialliacirculansOX=1397GN=CEQ21_16430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7664672732353	2	492.76604	983.517527	2.5706	0.0012667	0.23929	0.00011791	2.8099	0.0013846	492.7660148991316	63.493	0.68631	63.822	63.254	63.94	0.32899					29	21	2	0	0	0	0.61249	2	26417	26417;26468		10.824	1.4765	1	582450	+		3619	14891	1756	1768	4455;4456	4455					0.025109281121899585
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1422302126884	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.79923	1	0.94626	0.44626	1.4463	0.14703								0	0	0	1.0178	1	328	328		0.40072	0	1				3620	6177	1757	1769	4457	4457					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1028	1	1.2499	0.74986	1.7499	0.14703								0	0	0	1.0178	1	454	454		0.40072	0	1				3621	6177	1757	1769	4458	4458					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6676	1	1.8146	1.3146	2.3146	0.14703								0	0	0	1.0178	1	687	687		0.40072	0	1				3622	6177	1757	1769	4459	4459					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8739	1	2.021	1.521	2.521	0.14703								0	0	0	1.0178	1	771	771		0.40072	0	1				3623	6177	1757	1769	4460	4460					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1417724490166	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3721	1	2.4946	1.9946	2.9946	0.12256								0	0	0	1.0178	1	978	978		0.40072	0	1				3624	6177	1757	1769	4461	4461					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7807	1	2.9033	2.4033	3.4033	0.12256								0	0	0	1.0178	1	1147	1147		0.40072	0	1				3625	6177	1757	1769	4462	4462					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.483	1	3.585	3.085	4.085	0.10199								0	0	0	1.0178	1	1438	1438		0.40072	0	1				3626	6177	1757	1769	4463	4463					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413757205009	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.052214	1	0.7196	0.2196	1.2196	0.66738								0	0	0	1.0178	1	21	21		0.40072	0	1				3627	6177	1757	1769	4464	4464					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411926150322	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.96627	1	1.6196	1.1196	2.1196	0.65331								0	0	0	1.0178	1	395	395		0.40072	0	1				3628	6177	1757	1769	4465	4465					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4832	1	2.1365	1.6365	2.6365	0.65331								0	0	0	1.0178	1	608	608		0.40072	0	1				3629	6177	1757	1769	4466	4466					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8712	1	3.5054	3.0054	4.0054	0.63417								0	0	0	1.0178	1	1183	1183		0.40072	0	1				3630	6177	1757	1769	4467	4467					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5219	1	4.1455	3.6455	4.6455	0.62362								0	0	0	1.0178	1	1454	1454		0.40072	0	1				3631	6177	1757	1769	4468	4468					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9304	1	4.554	4.054	5.054	0.62362								0	0	0	1.0178	1	1621	1621		0.40072	0	1				3632	6177	1757	1769	4469	4469					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411010622978	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.033	1	4.6566	4.1566	5.1566	0.62362								0	0	0	1.0178	1	1664	1664		0.40072	0	1				3633	6177	1757	1769	4470	4470					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3539	1	4.9752	4.4752	5.4752	0.62127								0	0	0	1.0178	1	1797	1797		0.40072	0	1				3634	6177	1757	1769	4471	4471					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7783	1	5.3996	4.8996	5.8996	0.62127								0	0	0	1.0178	1	1972	1972		0.40072	0	1				3635	6177	1757	1769	4472	4472					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8727	1	5.4939	4.9939	5.9939	0.62127								0	0	0	1.0178	1	2011	2011		0.40072	0	1				3636	6177	1757	1769	4473	4473					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1407958865166	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1757	1	5.797	5.297	6.297	0.62127								0	0	0	1.0178	1	2137	2137		0.40072	0	1				3637	6177	1757	1769	4474	4474					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413757205009	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6812	1	6.3025	5.8025	6.8025	0.62127								0	0	0	1.0178	1	2345	2345		0.40072	0	1				3638	6177	1757	1769	4475	4475					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411620974541	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1834	1	6.8047	6.3047	7.3047	0.62127								0	0	0	1.0178	1	2554	2554		0.40072	0	1				3639	6177	1757	1769	4476	4476					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1409484744072	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8665	1	7.4936	6.9936	7.9936	0.62713								0	0	0	1.0178	1	2839	2839		0.40072	0	1				3640	6177	1757	1769	4477	4477					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412536501884	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2639	1	7.891	7.391	8.391	0.62713								0	0	0	1.0178	1	3005	3005		0.40072	0	1				3641	6177	1757	1769	4478	4478					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414672732353	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0558	1	8.6923	8.1923	9.1923	0.63651								0	0	0	1.0178	1	3336	3336		0.40072	0	1				3642	6177	1757	1769	4479	4479					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.57595	1	1.3117	0.81174	1.8117	0.73579								0	0	0	1.0178	1	238	238		0.40072	0	1				3643	6177	1757	1769	4480	4480					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.291	1	3.0394	2.5394	3.5394	0.7484								0	0	0	1.0178	1	951	951		0.40072	0	1				3644	6177	1757	1769	4481	4481					-0.04922907841284996
EDRGRPDG	8	Unmodified	_EDRGRPDG_					0	0	0		ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	ENST00000374810.7_1_20:33299822-33299891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412536501884	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7071	1	4.4524	3.9524	4.9524	0.74525								0	0	0	1.0178	1	1537	1537		0.40072	0	1				3645	6177	1757	1769	4482	4482					-0.04922907841284996
EDRHGGCHGEA	11	Unmodified	_EDRHGGCHGEA_					0	0	0		ENST00000461400.1_1_6:10530047-10621699:+|nuORF	ENST00000461400.1_1_6:10530047-10621699:+|nuORF	ENST00000461400.1_1_6:10530047-10621699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1168.462573230267	1	1167.45959	1166.45232	-0.38223	-0.00044624	0.032605	3.8065E-05	-0.34963	-0.00040818	1168.4608629258264	10.431	0.12764	11.176	11.125	11.253	0.74462					5	4	2	0	0	0	1.0405	1	4348	4348		0	0	1	336420			3646	6670	1758	1770	4483	4483					-0.12424996632580587
EDRHGGCHGEA	11	Unmodified	_EDRHGGCHGEA_					0	0	0		ENST00000461400.1_1_6:10530047-10621699:+|nuORF	ENST00000461400.1_1_6:10530047-10621699:+|nuORF	ENST00000461400.1_1_6:10530047-10621699:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1167.45959	1166.45232	-0.76642	-0.00089477	-0.11047	-0.00012897	-0.87689	-0.0010237	1168.4600873299837	10.38	0.14856	11.031	10.956	11.104	0.65058	-0.072697	-8.9854E-05	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362800			3647	6670	1758	1770							-0.12424996632580587
EDRLRFQWEDE	11	Unmodified	_EDRLRFQWEDE_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L;REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2383911013603	3	508.23555	1521.68482	0.62078	0.0003155	3.3865	0.0017211	4.0072	0.0020366	508.2375098301392	21.658	0.2429	23.274	23.079	23.322	1.6158					17	7	3	0	0	0	1.0224	1	9004	9004		2.4348	0	1	909770	+		3648	11620;10149	1759	1771	4484	4484					-0.05515456081002412
EDRLRFQWEDE	11	Unmodified	_EDRLRFQWEDE_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L;REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	508.23555	1521.68482	0.62078	0.0003155	3.3865	0.0017211	4.0072	0.0020366	508.2375098301392	21.658	0.2429	23.274	23.079	23.322	1.6158	0.074268	0.00038472	NaN	2.4348	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	909770	+		3649	11620;10149	1759	1771							-0.05515456081002412
EDSCCLRLHKV	11	Unmodified	_EDSCCLRLHKV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827392458916	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4246	1	1.5717	1.0717	2.0717	0.14703								0	0	0	0.63775	1	588	588		0.094841	0.094841	1				3650	4947	1760	1772	4485	4485					-0.0167201667441077
EDSCCLRLHKV	11	Unmodified	_EDSCCLRLHKV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825256228447	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7955	1	5.8755	5.3755	6.3755	0.079923								0	0	0	0.63775	1	2395	2395		0.094841	0.094841	1				3651	4947	1760	1772	4486	4486					-0.0167201667441077
EDSCCLRLHKV	11	Unmodified	_EDSCCLRLHKV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8820678591728	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8381	1	7.4652	6.9652	7.9652	0.62713								0	0	0	0.63775	1	2827	2827		0.094841	0.094841	1				3652	4947	1760	1772	4487	4487					-0.0167201667441077
EDSCCLRLHKV	11	Unmodified	_EDSCCLRLHKV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8829833865166	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.743	1	2.4914	1.9914	2.9914	0.7484								0	0	0	0.63775	1	722	722		0.094841	0.094841	1				3653	4947	1760	1772	4488	4488					-0.0167201667441077
EDSCCLRLHKV	11	Unmodified	_EDSCCLRLHKV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825866580009	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0204	1	9.7549	9.2549	10.255	0.73452								0	0	0	0.63775	1	3752	3752		0.094841	0.094841	1				3654	4947	1760	1772	4489	4489					-0.0167201667441077
EDSIAMYLE	9	Unmodified	_EDSIAMYLE_					0	0	0			REV__ENSG00000069329|ENST00000299138|VPS35	REV__ENSG00000069329|ENST00000299138|VPS35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1070.473193347454	1	1070.47105	1069.46378	3.8842	0.0041579	-2.4076	-0.0025773	1.4766	0.0015807	1070.4690941105068	73.226	0.3165	74.556	74.443	74.76	1.3297					19	9	3	0	0	0	0.1735	1	30737	30737		36.044	0	1	1824100	+		3655	8710	1761	1773	4490	4490					-0.06817612381837534
EDSIAMYLE	9	Unmodified	_EDSIAMYLE_					0	0	0			REV__ENSG00000069329|ENST00000299138|VPS35	REV__ENSG00000069329|ENST00000299138|VPS35	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1070.47105	1069.46378	3.8842	0.0041579	-2.4076	-0.0025773	1.4766	0.0015807	1070.4690941105068	73.226	0.3165	74.556	74.443	74.76	1.3297	-0.028961	0.00096502	NaN	36.044	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1824100	+		3656	8710	1761	1773							-0.06817612381837534
EDSWAMCHS	9	Unmodified	_EDSWAMCHS_					0	0	0		ENST00000377270.7_1_9:71687674-71687986:+|nuORF	ENST00000377270.7_1_9:71687674-71687986:+|nuORF	ENST00000377270.7_1_9:71687674-71687986:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.191859	1064.36917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.406	1	81.406	80.906	81.906	0								0	0	0	0.42693	1	33900	33900		2.0598	1.2661	1				3657	6195	1762	1774	4491	4491					-0.1604444940483063
EDTLLLIAEVM	11	Unmodified	_EDTLLLIAEVM_					0	0	0		ENSG00000189376|ENST00000276704|C8orf76	ENSG00000189376|ENST00000276704|C8orf76	ENSG00000189376|ENST00000276704|C8orf76	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8332397341728	2	623.833597	1245.65264	0.94572	0.00058997	-0.98637	-0.00061533	-0.040654	-2.5361E-05	623.8329857224417	45.602	0.44711	47.572	47.28	47.727	1.9703					32	13	3	0	0	0	0.99899	1	19131	19131		7.609	0	1	1652300			3658	4906	1763	1775	4492	4492					0.039640401916358314
EDVKANFY	8	Unmodified	_EDVKANFY_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1572143435478	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.907	1	42.907	42.407	43.407	0								0	0	0	1.0178	1	17959	17959		1.6526	0.87609	1				3659	4614	1764	1776	4493	4493					-0.03758798236151506
EDVPIEEA	8	Unmodified	_EDVPIEEA_					0	0	0			REV__tr|A0A553SG03|A0A553SG03_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09810PE=3SV=1	REV__tr|A0A553SG03|A0A553SG03_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09810PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1420776247978	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6512	1	2.6512	2.1512	3.1512	0								0	0	0	1.0178	1	1087	1087		0.40072	0	1		+		3660	14728	1765	1777	4494	4494					-0.04654497226999865
EDVPIEEA	8	Unmodified	_EDVPIEEA_					0	0	0			REV__tr|A0A553SG03|A0A553SG03_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09810PE=3SV=1	REV__tr|A0A553SG03|A0A553SG03_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09810PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1421386599541	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5036	1	4.5036	4.0036	5.0036	0								0	0	0	1.0178	1	1850	1850		0.40072	0	1		+		3661	14728	1765	1777	4495	4495					-0.04654497226999865
EDVQMKLEEC	10	Unmodified	_EDVQMKLEEC_					0	0	0		nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1;VAV1-EXOC3|2|fusion;VAV1-EXOC3|1|fusion	nc|ENSG00000141968|P15498-2|VAV1	nc|ENSG00000141968|P15498-2|VAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.2716552615166	2	612.267764	1222.52097	1.8539	0.0011351	2.2386	0.0013706	4.0925	0.0025057	612.2687937942421	71.749	1.5438	73.09	72.601	74.144	1.3415					151	49	5	0	0	0	0.80011	2	30286	30286;30339		12.241	3.4953	1	4934000			3662	2978	1766	1778	4496;4497	4496					-0.08138513167750716
EDVQMKLEEC	10	Unmodified	_EDVQMKLEEC_					0	0	0		nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1;VAV1-EXOC3|2|fusion;VAV1-EXOC3|1|fusion	nc|ENSG00000141968|P15498-2|VAV1	nc|ENSG00000141968|P15498-2|VAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.7721435427666	2	612.267764	1222.52097	1.595	0.00097659	2.6216	0.0016051	4.2166	0.0025817	612.7706981408389	71.256	1.4163	73.08	72.608	74.024	1.824					117	45	4	0	0	0	0.80011	1	30049	30049		12.241	2.1667	1	3377000			3663	2978	1766	1778	4498	4498					-0.08138513167750716
EDYYHIMYRPN	11	Unmodified	_EDYYHIMYRPN_					0	0	0		ENSG00000172568|ENST00000312349|FNDC9	ENSG00000172568|ENST00000312349|FNDC9	ENSG00000172568|ENST00000312349|FNDC9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8904601931572	3	500.890726	1499.65035	0.11959	5.9899E-05	-0.20074	-0.00010055	-0.081151	-4.0648E-05	500.89069109637194	14.414	0.19457	15.183	15.066	15.26	0.76937					12	7	2	0	0	0	1.0365	1	5976	5976		1.2148	0.76031	1	2253100			3664	4245	1767	1779	4499	4499					-0.07948995493461553
EEAQALLFLV	10	Unmodified	_EEAQALLFLV_					0	0	0		ENST00000575734.5_2_17:53800001-53805168:-|nuORF;ENST00000424486.2_2_17:53800001-53800097:-|nuORF;ENST00000575685.1_1_17:53800001-53800347:-|nuORF	ENST00000575734.5_2_17:53800001-53805168:-|nuORF	ENST00000575734.5_2_17:53800001-53805168:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2122375369072	3	378.213135	1131.61758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.97	1	103.97	103.47	104.47	0								0	0	0	0.66222	1	43785	43785		0.69767	0	1				3665	6461	1768	1780	4500	4500					0.05703165445970626
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.6575195193291	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.337	1	60.337	59.837	60.837	0								0	0	0	0.63775	1	25165	25165		0	0	1		+		3666	10996	1769	1781	4501	4501					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.6581909060478	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.433	1	60.433	59.933	60.933	0								0	0	0	0.63775	1	25204	25204		0	0	1		+		3667	10996	1769	1781	4502	4502					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.6580078005791	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.531	1	60.531	60.031	61.031	0								0	0	0	0.63775	1	25243	25243		0	0	1		+		3668	10996	1769	1781	4503	4503					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.6575195193291	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.629	1	60.629	60.129	61.129	0								0	0	0	0.63775	1	25283	25283		0	0	1		+		3669	10996	1769	1781	4504	4504					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_02	2	651.6564208865166	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.238	1	46.567	46.067	47.067	0.32899								0	0	0	0.63775	1	19404	19404		0	0	1		+		3670	10996	1769	1781	4505	4505					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_02	2	651.6584960818291	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.643	1	46.974	46.474	47.474	0.33034								0	0	0	0.63775	1	19570	19570		0	0	1		+		3671	10996	1769	1781	4506	4506					-0.33624971660788106
EECCCCCCEMF	11	Unmodified	_EECCCCCCEMF_					0	0	0			REV__ENSG00000170775|ENST00000303921|GPR37	REV__ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_02	2	651.6604492068291	2	651.658451	1301.30235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.504	1	48.834	48.334	49.334	0.33034								0	0	0	0.63775	1	20336	20336		0	0	1		+		3672	10996	1769	1781	4507	4507					-0.33624971660788106
EECWDKARH	9	Unmodified	_EECWDKARH_					0	0	0			REV__NBAS|p.F1122Sfs*13|1|0.03|ENSG00000151779|chr2:15379827-15379828|-/ATCTGTACCTGTG|frameshift_variant	REV__NBAS|p.F1122Sfs*13|1|0.03|ENSG00000151779|chr2:15379827-15379828|-/ATCTGTACCTGTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.841707	1172.50329	0.14782	5.7922E-05	-0.032743	-1.283E-05	0.11508	4.5092E-05	391.8424022291571	6.555	0.41095	6.6349	6.3774	6.7883	0.079923					26	24	2	0	0	0	0.11938	1	2670	2670		1.1933	0.12188	1	287910	+		3673	10406	1770	1782	4508	4508					-0.07606047587773901
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1271240115166	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.724	1	37.724	37.224	38.224	0								0	0	0	0.42693	1	15814	15814		0	0	1				3674	1693	1771	1783	4509	4509					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1277953982353	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.562	1	46.562	46.062	47.062	0								0	0	0	0.42693	1	19465	19465		0	0	1				3675	1693	1771	1783	4510	4510					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1273986697197	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.208	1	64.208	63.708	64.708	0								0	0	0	0.42693	1	26769	26769		0	0	1				3676	1693	1771	1783	4511	4511					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275512576103	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.441	1	64.441	63.941	64.941	0								0	0	0	0.42693	1	26864	26864		0	0	1				3677	1693	1771	1783	4512	4512					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1277953982353	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.452	1	65.452	64.952	65.952	0								0	0	0	0.42693	1	27276	27276		0	0	1				3678	1693	1771	1783	4513	4513					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1274597048759	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.507	1	75.507	75.007	76.007	0								0	0	0	0.42693	1	31434	31434		0	0	1				3679	1693	1771	1783	4514	4514					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275207400322	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.784	1	75.784	75.284	76.284	0								0	0	0	0.42693	1	31547	31547		0	0	1				3680	1693	1771	1783	4515	4515					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1273376345634	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.173	1	76.173	75.673	76.673	0								0	0	0	0.42693	1	31708	31708		0	0	1				3681	1693	1771	1783	4516	4516					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1274291872978	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.607	1	77.607	77.107	78.107	0								0	0	0	0.42693	1	32307	32307		0	0	1				3682	1693	1771	1783	4517	4517					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1280090212822	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.879	1	84.879	84.379	85.379	0								0	0	0	0.42693	1	35368	35368		0	0	1				3683	1693	1771	1783	4518	4518					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275817751884	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.505	1	85.505	85.005	86.005	0								0	0	0	0.42693	1	35626	35626		0	0	1				3684	1693	1771	1783	4519	4519					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1283141970634	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.364	1	89.587	89.087	90.087	0.22359								0	0	0	0.42693	1	37456	37456		0	0	1				3685	1693	1771	1783	4520	4520					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1284057497978	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.558	1	89.782	89.282	90.282	0.22359								0	0	0	0.42693	1	37535	37535		0	0	1				3686	1693	1771	1783	4521	4521					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1293212771416	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.848	1	90.072	89.572	90.572	0.22359								0	0	0	0.42693	1	37653	37653		0	0	1				3687	1693	1771	1783	4522	4522					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273071169853	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7444	1	7.3679	6.8679	7.8679	0.6235								0	0	0	0.42693	1	2788	2788		0	0	1				3688	1693	1771	1783	4523	4523					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273986697197	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8356	1	7.4627	6.9627	7.9627	0.62713								0	0	0	0.42693	1	2826	2826		0	0	1				3689	1693	1771	1783	4524	4524					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1272460818291	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.025	1	7.6522	7.1522	8.1522	0.62713								0	0	0	0.42693	1	2905	2905		0	0	1				3690	1693	1771	1783	4525	4525					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1272765994072	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5143	1	9.1509	8.6509	9.6509	0.63651								0	0	0	0.42693	1	3532	3532		0	0	1				3691	1693	1771	1783	4526	4526					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273376345634	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.447	1	13.141	12.641	13.641	0.69396								0	0	0	0.42693	1	5170	5170		0	0	1				3692	1693	1771	1783	4527	4527					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274902224541	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.068	1	13.794	13.294	14.294	0.72639								0	0	0	0.42693	1	5426	5426		0	0	1				3693	1693	1771	1783	4528	4528					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1271850466728	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.338	1	17.164	16.664	17.664	0.82643								0	0	0	0.42693	1	6792	6792		0	0	1				3694	1693	1771	1783	4529	4529					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.71	1	44.05	43.55	44.55	1.3399								0	0	0	0.42693	1	17902	17902		0	0	1				3695	1693	1771	1783	4530	4530					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1277648806572	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.829	1	44.169	43.669	44.669	1.3399								0	0	0	0.42693	1	17952	17952		0	0	1				3696	1693	1771	1783	4531	4531					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275207400322	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.73	1	6.4607	5.9607	6.9607	0.73074								0	0	0	0.42693	1	2376	2376		0	0	1				3697	1693	1771	1783	4532	4532					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276428103447	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9246	1	6.6553	6.1553	7.1553	0.73074								0	0	0	0.42693	1	2457	2457		0	0	1				3698	1693	1771	1783	4533	4533					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276733279228	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.134	1	6.8647	6.3647	7.3647	0.73074								0	0	0	0.42693	1	2544	2544		0	0	1				3699	1693	1771	1783	4534	4534					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276122927666	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4319	1	7.1626	6.6626	7.6626	0.73074								0	0	0	0.42693	1	2669	2669		0	0	1				3700	1693	1771	1783	4535	4535					-0.21201812270714981
EEDDYDDDF	9	Unmodified	_EEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1277648806572	3	388.128013	1161.36221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.149	1	12.936	12.436	13.436	0.78751								0	0	0	0.42693	1	5043	5043		0	0	1				3701	1693	1771	1783	4536	4536					-0.21201812270714981
EEDGREKLTIT	11	Unmodified	_EEDGREKLTIT_					0	0	0			REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.88938	1289.64631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.3205	1	0.3205	-0.1795	0.8205	0								0	0	0	0.63775	1	131	131		0.094841	0	1		+		3702	15665	1772	1784	4537	4537					0.013072382844711683
EEDLLYWVD	9	Unmodified	_EEDLLYWVD_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	591.2731201052666	2	591.271687	1180.52882	0.71686	0.00042386	0.84133	0.00049746	1.5582	0.00092132	591.2720766935653	12.664	0.21611	12.664	12.53	12.746	0					16	6	3	0	0	0	0.59203	2	5215	5215;5265		11.64	0.81637	1	1479200			3703	1021	1773	1785	4538;4539	4538					-0.05422294584332121
EEDWTEFWKRD	11	Unmodified	_EEDWTEFWKRD_					0	0	0			REV__nc|ENSG00000169894|Q02505-5|MUC3A	REV__nc|ENSG00000169894|Q02505-5|MUC3A	MSMS	GG20161007_CRH_Patient100_W632_02	4	770.8387328982353	2	770.838788	1539.66302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.29	1	102.48	101.98	102.98	0.19076								0	0	0	0.63775	1	43019	43019		3.2813	0	1		+		3704	10966	1774	1786	4540	4540					-0.08522260829590778
EEECFEYDCQD	11	Unmodified	_EEECFEYDCQD_					0	0	0		ENST00000469506.3_1_3:42201841-42226383:+|nuORF;nc|ENSG00000182606|Q9UPV9-2|TRAK1	ENST00000469506.3_1_3:42201841-42226383:+|nuORF	ENST00000469506.3_1_3:42201841-42226383:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	705.4397460818291	2	705.229032	1408.44351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.41	1	100.62	100.12	101.12	0.20527								0	0	0	0.63775	1	42225	42225		2.9952	1.6657	1				3705	6727	1775	1787	4541	4541					-0.24437195894597608
EEEDDSPP	8	Unmodified	_EEEDDSPP_					0	0	0		ENSG00000145725|ENST00000358359|PPIP5K2;nc|ENSG00000145725|O43314-2|PPIP5K2	ENSG00000145725|ENST00000358359|PPIP5K2	ENSG00000145725|ENST00000358359|PPIP5K2	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1714050173759	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.3	1	111.45	110.95	111.95	0.15038								0	0	0	1.0178	1	48237	48237		0.69038	0	1				3706	3121	1776	1788	4542	4542					-0.13172554883033172
EEEDDYDDDF	10	Unmodified	_EEEDDYDDDF_					0	0	0		ENSG00000110066|ENST00000304363|KMT5B;ENST00000441488.6_1_11:67925157-67938746:-|nuORF	ENSG00000110066|ENST00000304363|KMT5B	ENSG00000110066|ENST00000304363|KMT5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	646.2110473513603	2	646.209677	1290.4048	3.0247	0.0019546	-0.4348	-0.00028097	2.5899	0.0016736	646.2094051354408	72.773	0.43838	74.103	73.943	74.381	1.3298					39	13	5	0	0	0	0.89646	1	30574	30574		1.8442	0.51471	1	2219400			3707	1693	1777	1789	4543	4543					-0.22878461933123617
EEEDWMYDV	9	Unmodified	_EEEDWMYDV_					0	0	0			REV__TRIM52|p.M226Tfs*4|1|0.08|ENSG00000183718|chr5:181260137-181260138|-/G|frameshift_variant	REV__TRIM52|p.M226Tfs*4|1|0.08|ENSG00000183718|chr5:181260137-181260138|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2480651736259	4	304.618219	1214.44377	-0.064614	-1.9683E-05	-4.055	-0.0012352	-4.1196	-0.0012549	304.8675475823771	25.022	0.2727	26.739	26.605	26.877	1.7167					13	8	2	0	0	0	0.11955	1	10449	10449		0	0	1	409800	+		3708	11401	1778	1790	4544	4544					-0.15487408112471712
EEEEEEEDSRD	11	Unmodified	_EEEEEEEDSRD_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	698.2579833865166	2	698.255147	1394.49574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.055	1	19.034	18.534	19.534	0.97922								0	0	0	0.63775	1	7517	7517		0.26902	0.26902	1				3709	1428	1779	1791	4545	4545					-0.1857261795564682
EEEEEEEEDW	10	Unmodified	_EEEEEEEEDW_					0	0	0			REV__TRIM52|p.M226Tfs*4|1|0.08|ENSG00000183718|chr5:181260137-181260138|-/G|frameshift_variant	REV__TRIM52|p.M226Tfs*4|1|0.08|ENSG00000183718|chr5:181260137-181260138|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	676.5386840701103	2	676.736059	1351.45757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.432	1	99.658	99.158	100.16	0.22545								0	0	0	0.66166	1	41831	41831		1.6526	0	1		+		3710	11401	1780	1792	4546	4546					-0.2041050387033465
EEEEEEEEEDD	11	Unmodified	_EEEEEEEEEDD_					0	0	0		nc|ENSG00000100813|Q9UKV3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;ENSG00000100813|ENST00000605057|ACIN1;ENSG00000184828|ENST00000590800|ZBTB7C;ENSG00000178662|ENST00000651982|CSRNP3;sp|F5HBC6|PP71_HCMVMProteinpp71OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL82PE=3SV=1;ENST00000242505.10_1_10:74928045-74934468:+|nuORF;nc|ENSG00000290292|Q8IX15-3|HOMEZ;nc|ENSG00000290292|Q8IX15|HOMEZ;nc|ENSG00000178662|Q8WYN3-2|CSRNP3;ENSG00000105701|ENST00000608443|FKBP8;nc|ENSG00000105701|Q14318|FKBP8;ENSG00000162992|ENST00000295108|NEUROD1;ENST00000544835.7_1_19:18642981-18654375:-|nuORF;nc|ENSG00000105701|Q14318-3|FKBP8;sp|P06726|PP71_HCMVAProteinpp71OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL82PE=1SV=2;ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A;nc|ENSG00000186462|Q9ULW6-2|NAP1L2;ENSG00000186462|ENST00000373517|NAP1L2	nc|ENSG00000100813|Q9UKV3|ACIN1;REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47;ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000186462|Q9ULW6-2|NAP1L2	ENSG00000173120|ENST00000529006|KDM2A	MSMS	GG20161007_CRH_Patient100_W632_01	3	705.7316772341728	2	705.731171	1409.44779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.554	1	97.79	97.29	98.29	0.2366								0	0	0	0.63775	1	41053	41053		1.3295	0	1				3711	4267;1304;9419;2864;4790	1781	1793	4547	4547					-0.24055736666355187
EEEGDDEGQK	10	Unmodified	_EEEGDDEGQK_					0	0	0		nc|ENSG00000100813|Q9UKV3|ACIN1;nc|ENSG00000100813|Q9UKV3-5|ACIN1;ENSG00000100813|ENST00000605057|ACIN1	nc|ENSG00000100813|Q9UKV3|ACIN1	nc|ENSG00000100813|Q9UKV3|ACIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.2229492068291	2	568.222922	1134.43129	0.29227	0.00016607	-1.8047	-0.0010255	-1.5124	-0.00085938	568.221983098415	14.667	0.55682	14.667	14.317	14.874	0					52	17	4	0	0	0	0.85124	4	6041	5995;6041;6094;6146		6.7232	3.4419	1	4771500			3712	1304	1782	1794	4548;4549;4550;4551	4549					-0.13054728251131564
EEEGEEDV	8	Unmodified	_EEEGEEDV_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.1809265017509	2	468.177452	934.340351	2.4985	0.0011697	3.5183	0.0016472	6.0167	0.0028169	468.17926685189843	61.406	0.31837	63.363	63.179	63.497	1.9571					14	9	2	0	0	0	0.88587	1	25749	25749		5.2307	0	1	722950			3713	1835	1783	1795	4552	4552					-0.12944572228593643
EEEYDSYLD	9	Unmodified	_EEEYDSYLD_					0	0	0			REV__tr|A0A7D7AG59|A0A7D7AG59_9CLOTDUF6382domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07840PE=4SV=1	REV__tr|A0A7D7AG59|A0A7D7AG59_9CLOTDUF6382domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1528198122978	3	388.15227	1161.43498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.513	1	25.765	25.265	26.265	0.25197								0	0	0	0.42693	1	10653	10653		0.26902	0	1		+		3714	15920	1784	1796	4553	4553					-0.13928058477267768
EEEYDSYLD	9	Unmodified	_EEEYDSYLD_					0	0	0			REV__tr|A0A7D7AG59|A0A7D7AG59_9CLOTDUF6382domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07840PE=4SV=1	REV__tr|A0A7D7AG59|A0A7D7AG59_9CLOTDUF6382domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1523315310478	3	388.15227	1161.43498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.007	1	21.531	21.031	22.031	1.5237								0	0	0	0.42693	1	8318	8318		0.26902	0	1		+		3715	15920	1784	1796	4554	4554					-0.13928058477267768
EEFDDWEDDYD	11	Unmodified	_EEFDDWEDDYD_					0	0	0		nc|ENSG00000255302|Q9Y6B2-2|EID1;ENSG00000255302|ENST00000530028|EID1	nc|ENSG00000255302|Q9Y6B2-2|EID1	nc|ENSG00000255302|Q9Y6B2-2|EID1	MSMS	GG20161007_CRH_Patient100_W632_02	4	739.2492553591728	2	739.249334	1476.48411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.956	1	92.322	91.822	92.822	1.366								0	0	0	0.63775	1	38303	38303		0	0	1				3716	5401	1785	1797	4555	4555					-0.2350681497896403
EEFEEEEDIPD	11	Unmodified	_EEFEEEEDIPD_					0	0	0			REV__ENST00000479165.1_1_6:79650412-79665440:-|nuORF	REV__ENST00000479165.1_1_6:79650412-79665440:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	690.8356811404228	2	690.769902	1379.52525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.151	1	99.376	98.876	99.876	0.22545								0	0	0	0.63775	1	41720	41720		2.9952	0.26005	1		+		3717	10298	1786	1798	4556	4556					-0.1493305393951232
EEFKKETGV	9	Unmodified	_EEFKKETGV_					0	0	0		tr|A0A7D6W0L2|A0A7D6W0L2_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23880PE=4SV=1	tr|A0A7D6W0L2|A0A7D6W0L2_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23880PE=4SV=1	tr|A0A7D6W0L2|A0A7D6W0L2_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23880PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1915771365166	2	533.774396	1065.53424	0.89222	0.00047624	1.4374	0.00076723	2.3296	0.0012435	533.774960011139	30.234	0.24738	31.517	31.378	31.626	1.2825					12	7	2	0	0	0	0.11833	1	12665	12665		1.8442	0	1	579230			3718	17014	1787	1799	4557	4557					0.004094289981594557
EEFNEPAYK	9	Unmodified	_EEFNEPAYK_					0	0	0			REV__tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	REV__tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	375.5048705935478	3	376.173228	1125.49785	-1.246	-0.00046872	1.3739	0.00051682	0.12785	4.8093E-05	376.1737729755999	6.687	0.22556	7.3083	7.1601	7.3857	0.62127					22	14	2	0	0	0	0.11719	1	2717	2717		4.5289	0	1	347240	+		3719	14935	1788	1800	4558	4558					-0.05987447898587561
EEGDDQEGEKK	11	Unmodified	_EEGDDQEGEKK_					0	0	0		nc|ENSG00000164985|O75475-3|PSIP1;nc|ENSG00000164985|O75475-2|PSIP1;PSIP1|p.R404Gfs*8|1|0.67|ENSG00000164985|chr9:15468840-15468840|G/-|frameshift_variant;ENSG00000164985|ENST00000380733|PSIP1	nc|ENSG00000164985|O75475-3|PSIP1	nc|ENSG00000164985|O75475-3|PSIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.8496276736259	3	421.849361	1262.52625	0.47504	0.00020039	0.022111	9.3276E-06	0.49715	0.00020972	421.8489868503221	12.605	0.58394	12.694	12.402	12.986	0.089381					58	18	5	0	0	0	1.0131	2	5151	5151;5306		1.2148	0.10508	1	3626700			3720	3811	1789	1801	4559;4560	4559					-0.09450794779945682
EEGNQRRART	10	Unmodified	_EEGNQRRART_					0	0	0			REV__nc|ENSG00000137942|Q5T0N5-3|FNBP1L	REV__nc|ENSG00000137942|Q5T0N5-3|FNBP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	405.5987121462822	3	406.209558	1215.60684	0.88792	0.00036068	-2.0626	-0.00083783	-1.1746	-0.00047715	406.20854994869023	90.486	1.0312	90.486	90	91.031	0					44	32	2	0	0	0	0.12551	1	37860	37860		3.3196	1.5774	1	4986400	+		3721	10036	1790	1802	4561	4561					0.007665758442726656
EEGRLIRRLA	10	Unmodified	_EEGRLIRRLA_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	405.1788513064384	3	404.910561	1211.70985	1.0504	0.00042531	-3.1445	-0.0012733	-2.0942	-0.00084795	404.9086498960653	84.753	0.38303	84.753	84.589	84.972	0					22	11	3	0	0	0	0.1256	1	35267	35267		0.69767	0.61432	1	1009200	+		3722	12006	1791	1803	4562	4562					0.11246688302912844
EEGRLIRRLA	10	Unmodified	_EEGRLIRRLA_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	404.910561	1211.70985	2.6725	0.0010821	-3.1166	-0.0012619	-0.44409	-0.00017982	404.90854260048025	84.62	0.41578	84.881	84.726	85.142	0.26083	0.12915	0.00091024	NaN	0.69767	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	868940	+		3723	12006	1791	1803							0.11246688302912844
EEGRLIRRLA	10	Unmodified	_EEGRLIRRLA_					0	0	0			REV__ENSG00000272333|ENST00000420124|KMT2B	REV__ENSG00000272333|ENST00000420124|KMT2B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	404.910561	1211.70985	2.162	0.00087541	-5.9221	-0.0023979	-3.7601	-0.0015225	404.9076173543849	83.014	0.31076	84.652	84.447	84.758	1.6379	-0.10029	-0.0024978	NaN	0.69767	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	675550	+		3724	12006	1791	1803							0.11246688302912844
EEGSTISS	8	Unmodified	_EEGSTISS_					0	0	0		sp|P09719|US14_HCMVAUncharacterizedproteinHVLF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US14PE=3SV=2;sp|F5HD92|US14_HCMVMMembraneproteinUS14OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US14PE=3SV=1	sp|P09719|US14_HCMVAUncharacterizedproteinHVLF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US14PE=3SV=2	sp|P09719|US14_HCMVAUncharacterizedproteinHVLF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US14PE=3SV=2	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1780273318291	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.468	1	16.294	15.794	16.794	0.82643								0	0	0	1.0178	1	6428	6428		5.7604	3.1829	1				3725	15976	1792	1804	4563	4563					-0.066796432951719
EEIFPKLEL	9	Unmodified	_EEIFPKLEL_					0	0	0			REV__ENST00000543815.5_1_6:131486241-131540820:+|nuORF	REV__ENST00000543815.5_1_6:131486241-131540820:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3093139529228	2	559.310615	1116.60668	2.8436	0.0015905	-0.41059	-0.00022965	2.433	0.0013608	559.3094803113612	69.791	0.38012	71.629	71.468	71.849	1.8378					41	11	5	0	0	0	0.029093	1	29277	29277		88.904	7.0134	1	6576000	+		3726	9521	1793	1805	4564	4564					0.05303763071697176
EEIFPKLEL	9	Unmodified	_EEIFPKLEL_					0	0	0			REV__ENST00000543815.5_1_6:131486241-131540820:+|nuORF	REV__ENST00000543815.5_1_6:131486241-131540820:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	559.310615	1116.60668	1.5769	0.00088198	3.6154	0.0020221	5.1923	0.0029041	559.3124592536657	71.443	0.38387	71.767	71.622	72.006	0.32359	0.060803	0.0018078	NaN	88.904	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1201400	+		3727	9521	1793	1805							0.05303763071697176
EEIKRVIRKFP	11	Unmodified	_EEIKRVIRKFP_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|11|1|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|11|1|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|11|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.0796996951103	2	707.930086	1413.84562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.014	1	97.32	96.82	97.82	0.3062								0	0	0	0.63773	1	40808	40808		8.7454	3.8484	1				3728	7676	1794	1806	4565	4565					0.15524963093662336
EEIYRKGWYYL	11	Unmodified	_EEIYRKGWYYL_					0	0	0		tr|A0A7D6ZW35|A0A7D6ZW35_9CLOTHADfamilyhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17450PE=4SV=1	tr|A0A7D6ZW35|A0A7D6ZW35_9CLOTHADfamilyhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17450PE=4SV=1	tr|A0A7D6ZW35|A0A7D6ZW35_9CLOTHADfamilyhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17450PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	760.1930419802666	2	760.382634	1518.75072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.37	1	100.58	100.08	101.08	0.20527								0	0	0	0.63775	1	42208	42208		3.2813	0	1				3729	17163	1795	1807	4566	4566					0.012089848318737495
EEKIKKVHL	9	Unmodified	_EEKIKKVHL_					0	0	0		nc|ENSG00000134183|P19087|GNAT2	nc|ENSG00000134183|P19087|GNAT2	nc|ENSG00000134183|P19087|GNAT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3442260622978	2	562.345323	1122.67609	1.2972	0.0007295	-2.4132	-0.0013571	-1.116	-0.00062757	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.82604	1	29999	29999		2.3027	0.4585	1	3980400			3730	7874	1796	1808	4567	4567					0.11966266811123205
EEKKRRHQ	8	Unmodified	_EEKKRRHQ_					0	0	0			REV__ENST00000304494.9_2_9:21974788-21975004:-|nuORF	REV__ENST00000304494.9_2_9:21974788-21975004:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8110229372978	2	555.809971	1109.60539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6857	1	5.6857	5.1857	6.1857	0								0	0	0	1.0178	1	2335	2335		0.79363	0.10326	1		+		3731	12331	1797	1809	4568	4568					0.054969865461771406
EEKKVEKKV	9	Unmodified	_EEKKVEKKV_					0	0	0			REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	559.3115112185478	2	558.834788	1115.65502	2.4622	0.0013759	-3.0361	-0.0016967	-0.57392	-0.00032073	558.8318941165971	69.996	0.4173	71.834	71.656	72.073	1.8378					20	12	3	0	0	0	0.11645	1	29331	29331		4.756	0	1	1987400	+		3732	9824	1798	1810	4569	4569					0.1018225671161872
EEKLSDEPDT	10	Unmodified	_EEKLSDEPDT_					0	0	0			REV__tr|A0A553SMS3|A0A553SMS3_NIACIXanthinedehydrogenasesubunitDOS=NialliacirculansOX=1397GN=pucDPE=4SV=1	REV__tr|A0A553SMS3|A0A553SMS3_NIACIXanthinedehydrogenasesubunitDOS=NialliacirculansOX=1397GN=pucDPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1760131716728	3	388.175186	1161.50373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.46	1	105.63	105.13	106.13	0.16679								0	0	0	0.66151	1	44865	44865		1.9064	0	1		+		3733	15031	1799	1811	4570	4570					-0.07056394177561742
EEKQRAFEILD	11	Unmodified	_EEKQRAFEILD_					0	0	0		nc|ENSG00000089177|Q96L93-5|KIF16B;nc|ENSG00000089177|Q96L93-6|KIF16B;nc|ENSG00000089177|Q96L93-4|KIF16B;ENSG00000089177|ENST00000354981|KIF16B;nc|ENSG00000089177|Q96L93-2|KIF16B	nc|ENSG00000089177|Q96L93-5|KIF16B	nc|ENSG00000089177|Q96L93-5|KIF16B	MSMS	GG20161007_CRH_Patient100_W632_01	3	689.5530883669853	2	689.354074	1376.69359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.32	1	97.605	97.105	98.105	0.28442								0	0	0	0.63774	1	40950	40950		8.1555	0.54658	1				3734	1122	1800	1812	4571	4571					0.020315175554742382
EEKVRRLKRKN	11	Unmodified	_EEKVRRLKRKN_					0	0	0		nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9673339724541	3	485.967069	1454.87938	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.02	1	16.151	15.651	16.651	0.13022								0	0	0	0.63775	1	6650	6650		0.073264	0	1				3735	488	1801	1813	4572	4572					0.17013384585425229
EELCQNLLLL	10	Unmodified	_EELCQNLLLL_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	594.2660400271416	2	594.320657	1186.62676	3.1762	0.0018877	-0.97429	-0.00057904	2.2019	0.0013087	594.8220327596213	64.656	0.24706	66.063	65.923	66.17	1.4071					11	7	2	0	0	0	0.12399	1	27074	27074		12.241	0	1	386440	+		3736	10356	1802	1814	4573	4573					0.040911907400186465
EELEEINNL	9	Unmodified	_EELEEINNL_					0	0	0		tr|A0A7D7A523|A0A7D7A523_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=rluFPE=3SV=1	tr|A0A7D7A523|A0A7D7A523_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=rluFPE=3SV=1	tr|A0A7D7A523|A0A7D7A523_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=rluFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1103.531909167767	1	1102.52626	1101.51898	3.3487	0.003692	1.5274	0.0016839	4.876	0.0053759	1102.5277947754391	96.906	0.15664	97.212	97.133	97.289	0.3062					8	4	3	0	0	0	0.30098	1	40780	40780		25.399	8.457	1	18310000			3737	17294	1803	1815	4574	4574					-0.027714825896964612
EELKFRKQRRL	11	Unmodified	_EELKFRKQRRL_					0	0	0			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	502.3396789431572	3	501.63532	1501.88413	4.1423	0.0020779	-1.563	-0.00078404	2.5793	0.0012939	501.63437579615766	89.684	1.8019	91.089	90.296	92.098	1.4045					112	56	3	0	0	0	0.14606	1	37907	37907		0.50596	0.41111	1	1527700	+		3738	10993	1804	1816	4575	4575					0.15326268728199466
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883239626884	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4316	1	7.5079	7.0079	8.0079	0.07632								0	0	0	0.63775	1	3075	3075		0	0	1		+		3739	12859	1805	1817	4576	4576					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882934451103	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5419	1	7.6182	7.1182	8.1182	0.07632								0	0	0	0.63775	1	3120	3120		0	0	1		+		3740	12859	1805	1817	4577	4577					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882629275322	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6456	1	7.7219	7.2219	8.2219	0.07632								0	0	0	0.63775	1	3163	3163		0	0	1		+		3741	12859	1805	1817	4578	4578					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883544802666	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7597	1	7.8361	7.3361	8.3361	0.07632								0	0	0	0.63775	1	3210	3210		0	0	1		+		3742	12859	1805	1817	4579	4579					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882324099541	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8658	1	7.9421	7.4421	8.4421	0.07632								0	0	0	0.63775	1	3254	3254		0	0	1		+		3743	12859	1805	1817	4580	4580					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9733	1	8.0496	7.5496	8.5496	0.07632								0	0	0	0.63775	1	3299	3299		0	0	1		+		3744	12859	1805	1817	4581	4581					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882324099541	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.276	1	8.3523	7.8523	8.8523	0.07632								0	0	0	0.63775	1	3426	3426		0	0	1		+		3745	12859	1805	1817	4582	4582					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882934451103	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3756	1	8.4519	7.9519	8.9519	0.07632								0	0	0	0.63775	1	3467	3467		0	0	1		+		3746	12859	1805	1817	4583	4583					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883239626884	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4729	1	8.5492	8.0492	9.0492	0.07632								0	0	0	0.63775	1	3508	3508		0	0	1		+		3747	12859	1805	1817	4584	4584					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883544802666	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5751	1	8.6514	8.1514	9.1514	0.07632								0	0	0	0.63775	1	3551	3551		0	0	1		+		3748	12859	1805	1817	4585	4585					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6649	1	8.7413	8.2413	9.2413	0.07632								0	0	0	0.63775	1	3589	3589		0	0	1		+		3749	12859	1805	1817	4586	4586					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884155154228	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7842	1	8.8605	8.3605	9.3605	0.07632								0	0	0	0.63775	1	3638	3638		0	0	1		+		3750	12859	1805	1817	4587	4587					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883544802666	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0126	1	9.0889	8.5889	9.5889	0.07632								0	0	0	0.63775	1	3733	3733		0	0	1		+		3751	12859	1805	1817	4588	4588					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891479372978	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.66	1	21.883	21.383	22.383	0.223								0	0	0	0.63775	1	9007	9007		0	0	1		+		3752	12859	1805	1817	4589	4589					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882324099541	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.2	109.7	110.7	0.048843								0	0	0	0.63775	1	47535	47535		0	0	1		+		3753	12859	1805	1817	4590	4590					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882629275322	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3066	1	8.9431	8.4431	9.4431	0.63651								0	0	0	0.63775	1	3443	3443		0	0	1		+		3754	12859	1805	1817	4591	4591					0.009234324664475935
EELLISLIEEC	11	Unmodified	_EELLISLIEEC_					0	0	0			REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	REV__ENST00000450964.1_1_9:34125177-34125690:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4053	1	10.15	9.6499	10.65	0.74462								0	0	0	0.63775	1	3914	3914		0	0	1		+		3755	12859	1805	1817	4592	4592					0.009234324664475935
EELRELEWRQK	11	Unmodified	_EELRELEWRQK_					0	0	0			REV__TCHP|p.R361Lfs*41|1|0.04|ENSG00000139437|chr12:109913017-109913018|-/ACTTCCAACAGTACTTTCCGTGGATGCT|frameshift_variant	REV__TCHP|p.R361Lfs*41|1|0.04|ENSG00000139437|chr12:109913017-109913018|-/ACTTCCAACAGTACTTTCCGTGGATGCT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	505.9344970583916	3	505.935323	1514.78414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.509	1	13.509	13.009	14.009	0								0	0	0	0.63775	1	5599	5599		4.1166	0	1		+		3756	10104	1806	1818	4593	4593					0.04733986603741869
EELRELEWRQK	11	Unmodified	_EELRELEWRQK_					0	0	0			REV__TCHP|p.R361Lfs*41|1|0.04|ENSG00000139437|chr12:109913017-109913018|-/ACTTCCAACAGTACTTTCCGTGGATGCT|frameshift_variant	REV__TCHP|p.R361Lfs*41|1|0.04|ENSG00000139437|chr12:109913017-109913018|-/ACTTCCAACAGTACTTTCCGTGGATGCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.9345886111259	3	505.935323	1514.78414	0.10382	5.2524E-05	-1.8372	-0.00092953	-1.7334	-0.00087701	505.934703415292	12.761	0.30646	13.549	13.395	13.701	0.78751					26	9	4	0	0	0	1.0254	1	5315	5315		2.2527	0	1	2518400	+		3757	10104	1806	1818	4594	4594					0.04733986603741869
EELTPIALA	9	Unmodified	_EELTPIALA_					0	0	0			REV__PRAMEF12|p.P32R|1|0.22|ENSG00000116726|chr1:12774962-12774962|C/G|missense_variant	REV__PRAMEF12|p.P32R|1|0.22|ENSG00000116726|chr1:12774962-12774962|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7649108767509	2	478.768583	955.522613	2.9011	0.0013889	-2.3201	-0.0011108	0.58099	0.00027816	478.7684350663277	61.973	0.24764	63.93	63.751	63.999	1.9571					14	7	3	0	0	0	0.24063	1	25994	25994		28.487	10.352	1	2030900	+		3758	9479	1807	1819	4595	4595					0.04307231974792103
EELTPIALA	9	Unmodified	_EELTPIALA_					0	0	0			REV__PRAMEF12|p.P32R|1|0.22|ENSG00000116726|chr1:12774962-12774962|C/G|missense_variant	REV__PRAMEF12|p.P32R|1|0.22|ENSG00000116726|chr1:12774962-12774962|C/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	478.768583	955.522613	2.9011	0.0013889	-2.3201	-0.0011108	0.58099	0.00027816	478.7684350663277	61.973	0.24764	63.93	63.751	63.999	1.9571	-0.038386	-0.0035573	NaN	28.487	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2030900	+		3759	9479	1807	1819							0.04307231974792103
EELVVQPLLV	10	Unmodified	_EELVVQPLLV_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2292968630791	3	380.228785	1137.66453	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.321	1	79.622	79.122	80.122	0.30047								0	0	0	0.66222	1	33166	33166		0.69767	0	1				3760	1923	1808	1820	4596	4596					0.10120024997127075
EELVVQPLLV	10	Unmodified	_EELVVQPLLV_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2277404665947	3	380.228785	1137.66453	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.372	1	78.139	77.639	78.639	1.7672								0	0	0	0.66222	1	32040	32040		0.69767	0.19171	1				3761	1923	1808	1820	4597	4597					0.10120024997127075
EEMQEVAYK	9	Unmodified	_EEMQEVAYK_					0	0	0		tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	375.5049316287041	3	376.174352	1125.50123	-1.7755	-0.00066791	-0.75519	-0.00028408	-2.5307	-0.00095199	376.1740982592233	8.8674	0.74638	8.8674	8.4807	9.2271	0					41	31	2	0	0	0	0.11611	1	3707	3707		6.6304	1.2277	1	610150			3762	16835	1809	1821	4598	4598					-0.05650521116217533
EENDEHHL	8	Unmodified	_EENDEHHL_					0	0	0			REV__ENST00000524311.1_1_X:148850572-148853026:+|nuORF	REV__ENST00000524311.1_1_X:148850572-148853026:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.4769164919853	3	341.477311	1021.4101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.598	1	27.869	27.369	28.369	1.2715								0	0	0	1.0178	1	11138	11138		0.45834	0	1		+		3763	12000	1810	1822	4599	4599					-0.0997464876934373
EEPIEQLLK	9	Unmodified	_EEPIEQLLK_					0	0	0			REV__tr|A0A7D6VV57|A0A7D6VV57_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23015PE=4SV=1	REV__tr|A0A7D6VV57|A0A7D6VV57_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23015PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	549.8053466677666	2	549.805697	1097.59684	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.363	1	10.363	9.8633	10.863	0								0	0	0	0.317	1	4272	4272		16.942	4.4107	1		+		3764	15525	1811	1823	4600	4600					0.05194575066343532
EERAIQRAECR	11	Unmodified	_EERAIQRAECR_					0	0	0		ENSG00000163617|ENST00000295878|CCDC191	ENSG00000163617|ENST00000295878|CCDC191	ENSG00000163617|ENST00000295878|CCDC191	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	680.8423950076103	2	680.841142	1359.66773	1.7671	0.0012031	-0.43772	-0.00029802	1.3294	0.00090512	680.840882018108	63.038	0.52692	64.982	64.721	65.248	1.9444					60	16	5	0	0	0	0.39232	1	26467	26467		33.445	0	1	34914000			3765	3702	1812	1824	4601	4601					0.0022834483218048263
EEREFEKVDEQ	11	Unmodified	_EEREFEKVDEQ_					0	0	0			REV__nc|ENSG00000135679|Q00987-6|MDM2	REV__nc|ENSG00000135679|Q00987-6|MDM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	719.1613647341728	2	719.328253	1436.64195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.33	1	101.52	101.02	102.02	0.19076								0	0	0	0.63775	1	42606	42606		2.7352	0	1		+		3766	9950	1813	1825	4602	4602					-0.05890270929080543
EERLRKNRARR	11	Unmodified	_EERLRKNRARR_					0	0	0		sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	742.4380981326103	2	742.437464	1482.86037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.8	1	105.96	105.46	106.46	0.15859								0	0	0	0.63775	1	45150	45150		0.26902	0	1				3767	16004	1814	1826	4603	4603					0.13825848014403164
EERPWLWVV	9	Unmodified	_EERPWLWVV_					0	0	0		nc|ENSG00000127022|P27824-3|CANX;ENSG00000127022|ENST00000247461|CANX;nc|ENSG00000127022|P27824-2|CANX	nc|ENSG00000127022|P27824-3|CANX	nc|ENSG00000127022|P27824-3|CANX	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3243896365166	2	607.321848	1212.62914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.86	1	107.02	106.52	107.52	0.15781								0	0	0	0.42693	1	45845	45845		2.0598	0.57785	1				3768	2328	1815	1827	4604	4604					0.03133407259974774
EESCSHEC	8	Unmodified	_EESCSHEC_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1469604372978	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.39	1	88.625	88.125	89.125	0.23471								0	0	0	1.0178	1	37062	37062		0.69038	0	1				3769	4700	1816	1828	4605	4605					-0.18456704084189823
EESRRLWRFLW	11	Unmodified	_EESRRLWRFLW_					0	0	0		SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2;SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant;SPTBN2|p.R1805Qfs*108|1|0.25|ENSG00000173898|chr11:66691414-66691435|TGGCGTGCCCCGTGCAGGAAGC/-|frameshift_variant;SPTBN2|p.A1813Pfs*107|1|0.29|ENSG00000173898|chr11:66691412-66691412|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	789.4180175662041	2	789.420417	1576.82628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.966	1	97.251	96.751	97.751	0.28442								0	0	0	0.63774	1	40799	40799		8.1555	2.4237	1				3770	4305	1817	1829	4606	4606					0.06094006802777585
EETCSELFL	9	Unmodified	_EETCSELFL_					0	0	0		ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1070.468066394329	1	1070.47105	1069.46378	3.0866	0.0033041	-3.3637	-0.0036008	-0.27712	-0.00029664	1070.4675428966339	72.854	0.31705	74.664	74.48	74.797	1.8101					17	9	2	0	0	0	0.46905	1	30610	30610		16.942	2.104	1	2134100			3771	6319	1818	1830	4607	4607					-0.06817612381837534
EETRKKETI	9	Unmodified	_EETRKKETI_					0	0	0			REV__tr|A0A553SMT4|A0A553SMT4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23125PE=4SV=1	REV__tr|A0A553SMT4|A0A553SMT4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3113281130791	2	567.311677	1132.6088	1.3028	0.00073908	-1.3425	-0.00076162	-0.039732	-2.254E-05	567.3112722546335	57.173	0.38013	58.587	58.338	58.718	1.4145					20	12	3	0	0	0	0.49082	1	23966	23966		15.847	0	1	1233900	+		3772	15032	1819	1831	4608	4608					0.04780191809527423
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7755615115166	2	486.773668	971.532783	2.1143	0.0010292	2.8236	0.0013745	4.9379	0.0024036	486.77447764226895	82.362	0.39973	82.362	82.185	82.585	0					31	12	3	0	0	0	0.68174	2	34312	34262;34312		32.117	3.6301	1	2362200	+		3773	14842	1820	1832	4609;4610	4610					0.04587839700070617
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5436279177666	1	972.54006	971.532783	2.0984	0.0020407	2.3421	0.0022778	4.4405	0.0043185	972.542441648093	82.385	0.39973	82.385	82.185	82.585	0					29	12	3	0	0	0	0.76103	1	34286	34286		24.674	2.9272	1	4071400	+		3774	14842	1820	1832	4611	4611					0.04587839700070617
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7760192751884	2	486.773668	971.532783	3.1327	0.0015249	4.0272	0.0019603	7.1599	0.0034852	486.77511106309703	83.67	0.48772	83.941	83.739	84.227	0.27029					26	15	2	0	0	0	0.68174	2	34989	34989;35055		32.117	3.6301	1	2162800	+		3775	14842	1820	1832	4612;4613	4612					0.04587839700070617
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5457031130791	1	972.54006	971.532783	1.2972	0.0012616	2.6817	0.0026081	3.9789	0.0038696	972.5426423854386	80.38	0.53802	82.097	81.908	82.446	1.7167					41	17	3	0	0	0	0.76103	1	33675	33675		24.674	2.9272	1	16048000	+		3776	14842	1820	1832	4614	4614					0.04587839700070617
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	486.773668	971.532783	2.1143	0.0010292	2.8236	0.0013745	4.9379	0.0024036	486.77447764226895	82.362	0.39973	82.362	82.185	82.585	0	-0.16995	1.2917E-05	NaN	32.117	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2362200	+		3777	14842	1820	1832							0.04587839700070617
EEWGLILL	8	Unmodified	_EEWGLILL_					0	0	0			REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	REV__tr|A0A553SI86|A0A553SI86_NIACIFAD:proteinFMNtransferaseOS=NialliacirculansOX=1397GN=CEQ21_14430PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	486.773668	971.532783	3.4655	0.0016869	2.7479	0.0013376	6.2134	0.0030245	486.77566105832506	81.469	0.37151	82.702	82.502	82.873	1.2332	0.16995	-6.0755E-05	NaN	32.117	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	707250	+		3778	14842	1820	1832							0.04587839700070617
EEYRHVRRRRR	11	Unmodified	_EEYRHVRRRRR_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MSMS	GG20161007_CRH_Patient100_W632_02	4	806.9534789919853	2	806.953812	1611.89307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.502	1	96.808	96.308	97.308	0.3062								0	0	0	0.63775	1	40595	40595		0	0	1		+		3779	9375	1821	1833	4615	4615					0.11160055137224845
EEYRREYEKRE	11	Unmodified	_EEYRREYEKRE_					0	0	0		ENST00000509702.5_1_4:23766811-23826805:-|nuORF;nc|ENSG00000109819|Q9UBK2-9|PPARGC1A;nc|ENSG00000109819|Q9UBK2-4|PPARGC1A;ENSG00000109819|ENST00000264867|PPARGC1A;nc|ENSG00000109819|Q9UBK2-3|PPARGC1A	ENST00000509702.5_1_4:23766811-23826805:-|nuORF	ENST00000509702.5_1_4:23766811-23826805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	793.8926879763603	2	793.881518	1585.74848	2.3283	0.0018484	4.048	0.0032136	6.3763	0.005062	793.8844675846522	72.311	1.5002	74.121	73.831	75.331	1.8101					94	47	3	0	0	0	0.98155	1	30259	30259		4.897	0	1	23761000			3780	1682	1822	1834	4616	4616					-0.020960956439239453
EEYYRRRCVPK	11	Unmodified	_EEYYRRRCVPK_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	376.1959411501884	4	375.445043	1497.75107	-1.4708	-0.00055219	-2.5429	-0.0009547	-4.0136	-0.0015069	375.6948079386363	18.661	0.28009	18.661	18.523	18.804	0					14	8	2	0	0	0	0.14606	1	7761	7761		0.40827	0.26837	1	503590	+		3781	9781	1823	1835	4617	4617					0.022100812800317726
EFAHYCNFCK	10	Unmodified	_EFAHYCNFCK_					0	0	0		FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant;ENSG00000112214|ENST00000450218|FHL5	FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.2606078982353	2	631.260076	1260.5056	0.85567	0.00054015	0.17255	0.00010893	1.0282	0.00064908	631.260604767332	13.963	0.46136	13.963	13.732	14.193	0					25	14	2	0	0	0	0.86043	1	5810	5810		5.7319	0.43497	1	1370300			3782	1773	1824	1836	4618	4618					-0.11423335174299609
EFAKPLQPL	9	Unmodified	_EFAKPLQPL_					0	0	0			REV__ENST00000607532.5_1_6:13307806-13327130:-|nuORF	REV__ENST00000607532.5_1_6:13307806-13327130:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2020446658134	3	348.20257	1041.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.704	1	68.592	68.092	69.092	1.8889								0	0	0	0.42693	1	27982	27982		1.0715	0.10919	1		+		3783	10291	1825	1837	4619	4619					0.0667521748271156
EFARFRVWMDR	11	Unmodified	_EFARFRVWMDR_					0	0	0			REV__nc|ENSG00000185453|Q86XI8|ZSWIM9	REV__nc|ENSG00000185453|Q86XI8|ZSWIM9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.9213439822197	3	504.922472	1511.74559	0.021717	1.0965E-05	-2.6577	-0.0013419	-2.636	-0.001331	504.9212972702918	12.557	0.30526	13.345	13.152	13.458	0.78751					31	9	5	0	0	0	0.94496	1	5215	5215		3.5927	0	1	3337700	+		3784	11464	1826	1838	4620	4620					0.010184024882164522
EFCEKEEDWNV	11	Unmodified	_EFCEKEEDWNV_					0	0	0			REV__nc|ENSG00000076242|P40692-2|MLH1	REV__nc|ENSG00000076242|P40692-2|MLH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1994811892509	3	476.530975	1426.5711	0.86441	0.00041192	-1.325	-0.00063142	-0.46063	-0.0002195	476.8643061929315	51.075	0.57301	52.469	52.139	52.712	1.3938					23	18	2	0	0	0	0.14606	1	21271	21271		0.08335	0.08335	1	3001400	+		3785	8768	1827	1839	4621	4621					-0.12512687238267972
EFEIKSLKSS	10	Unmodified	_EFEIKSLKSS_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	584.2715942263603	2	584.316428	1166.6183	0.66817	0.00039042	-1.9484	-0.0011385	-1.2803	-0.00074807	584.315583341679	53.128	0.29748	55.098	54.997	55.295	1.9697					30	13	3	0	0	0	0.125	1	22337	22337		6.2058	0	1	5596300	+		3786	9434	1828	1840	4622	4622					0.04165960095042465
EFELQSLSL	9	Unmodified	_EFELQSLSL_					0	0	0		nc|ENSG00000149639|O94964-1|MTCL2;AURKA-SOGA1|1|fusion;ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-4|MTCL2;AURKA-SOGA1|2|fusion	nc|ENSG00000149639|O94964-1|MTCL2	nc|ENSG00000149639|O94964-1|MTCL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1932250857353	2	533.276772	1064.53899	3.785	0.0020185	2.7838	0.0014845	6.5688	0.003503	533.2784436557286	82.124	0.19035	83.794	83.671	83.861	1.67					8	5	2	0	0	0	0.10844	1	34426	34426		11.64	3.7301	1	610360			3787	96	1829	1841	4623	4623					0.009303131409296839
EFFAPWCGHCK	11	Unmodified	_EFFAPWCGHCK_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	661.9460937380791	2	662.783718	1323.55288	1.7031	0.0011288	-0.66355	-0.00043979	1.0395	0.00068898	662.783826887355	43.177	0.29128	43.501	43.384	43.675	0.32388					9	8	2	0	0	0	0.14606	1	18097	18097		3.2813	0	1	255090			3788	3942	1830	1842	4624	4624					-0.09595055903287175
EFFSAYRK	8	Unmodified	_EFFSAYRK_					0	0	0		ENST00000273347.9_1_3:101520322-101520790:+|nuORF	ENST00000273347.9_1_3:101520322-101520790:+|nuORF	ENST00000273347.9_1_3:101520322-101520790:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2668334841728	2	524.266542	1046.51853	1.9656	0.0010305	-0.70862	-0.0003715	1.257	0.00065901	524.2663028820707	41.219	2.5845	43.111	41.645	44.229	1.8927					159	82	3	0	0	0	0.87431	1	17656	17656		12.532	0.29089	1	1760200			3789	5683	1831	1843	4625	4625					-0.0028681272824542248
EFIHEIYSL	9	Unmodified	_EFIHEIYSL_					0	0	0			REV__ENSG00000162734|ENST00000360472|PEA15	REV__ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.2938110232353	2	575.792589	1149.57063	2.1651	0.0012467	-0.5012	-0.00028859	1.6639	0.00095808	576.2934796818037	67.944	1.0858	69.814	69.458	70.544	1.87					82	34	4	0	0	0	0.13873	1	28527	28527		39.957	9.3208	1	6000700	+		3790	10657	1832	1844	4626	4626					0.0018230589482755022
EFIHYLKYV	9	Unmodified	_EFIHYLKYV_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.2427856326103	3	404.553492	1210.63865	2.0449	0.00082727	-1.3107	-0.00053027	0.73414	0.000297	404.5531845864883	66.512	0.22047	66.837	66.749	66.97	0.32449					8	6	2	0	0	0	0.11941	1	27888	27888		1.0715	0.83562	1	188500			3791	1680	1833	1845	4627	4627					0.04175175545492493
EFIVRRKGF	9	Unmodified	_EFIVRRKGF_					0	0	0		nc|ENSG00000124615|Q9NZB8-6|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1;nc|ENSG00000124615|Q9NZB8-4|MOCS1;nc|ENSG00000124615|Q9NZB8-3|MOCS1;nc|ENSG00000124615|Q9NZB8-5|MOCS1;nc|ENSG00000124615|Q9NZB8-7|MOCS1;nc|ENSG00000124615|Q9NZB8-2|MOCS1;ENSG00000124615|ENST00000340692|MOCS1;ENST00000564020.1_1_16:48530917-48531397:+|nuORF	nc|ENSG00000124615|Q9NZB8-6|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	576.2795287966728	2	576.337833	1150.66111	1.5907	0.00091677	-1.6514	-0.00095177	-0.060722	-3.4996E-05	576.3371844996383	84.24	0.27997	85.399	85.279	85.559	1.159					13	8	2	0	0	0	0.10591	1	35390	35390		18.135	7.3111	1	1065500			3792	7863	1834	1846	4628	4628					0.09180819733796852
EFIWLHDSF	9	Unmodified	_EFIWLHDSF_					0	0	0		ENSG00000129515|ENST00000362031|SNX6;ENST00000556303.1_1_14:35074800-35099358:-|nuORF	ENSG00000129515|ENST00000362031|SNX6	ENSG00000129515|ENST00000362031|SNX6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	597.8442870974541	2	597.284931	1192.55531	3.011	0.0017984	2.3798	0.0014214	5.3908	0.0032198	597.2849817821543	70.421	0.22559	71.775	71.648	71.873	1.3536					13	6	3	0	0	0	0.078322	1	29534	29534		34.102	7.2188	1	594520			3793	2406	1835	1847	4629	4629					-0.033265609023374054
EFIWLHDSF	9	Unmodified	_EFIWLHDSF_					0	0	0		ENSG00000129515|ENST00000362031|SNX6;ENST00000556303.1_1_14:35074800-35099358:-|nuORF	ENSG00000129515|ENST00000362031|SNX6	ENSG00000129515|ENST00000362031|SNX6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	597.8433105349541	2	597.284931	1192.55531	2.8795	0.0017199	0.71595	0.00042763	3.5954	0.0021475	597.7878625388454	69.876	0.25584	71.714	71.593	71.849	1.8378					9	7	2	0	0	0	0.08828	1	29307	29307		28.487	6.7402	1	504360			3794	2406	1835	1847	4630	4630					-0.033265609023374054
EFNGTKFQK	9	Unmodified	_EFNGTKFQK_					0	0	0		tr|A0A7D6VTL5|A0A7D6VTL5_9CLOTMethylated-DNA--protein-cysteinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21595PE=3SV=1	tr|A0A7D6VTL5|A0A7D6VTL5_9CLOTMethylated-DNA--protein-cysteinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21595PE=3SV=1	tr|A0A7D6VTL5|A0A7D6VTL5_9CLOTMethylated-DNA--protein-cysteinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21595PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2197143435478	2	549.782556	1097.55056	3.9081	0.0021486	-3.3419	-0.0018373	0.56615	0.00031126	549.7810779463496	90.903	0.63773	91.885	91.622	92.259	0.98157					36	19	3	0	0	0	0.11833	1	38393	38393		1.8442	0.19162	1	818900			3795	16923	1836	1848	4631	4631					0.005685549549070856
EFPPGTPRF	9	Unmodified	_EFPPGTPRF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2676879763603	2	524.266542	1046.51853	2.2312	0.0011698	-0.16364	-8.5789E-05	2.0676	0.001084	524.2665880242425	41.553	2.8181	42.878	41.498	44.316	1.3254					165	89	2	0	0	0	0.1388	11	17424	17030;17086;17152;17215;17267;17318;17371;17424;17602;17669;17772		39.95	8.628	1	1684100			3796	5388	1837	1849	4632;4633;4634;4635;4636;4637;4638;4639;4640;4641;4642	4639					-0.0028681272824542248
EFPPGTPRF	9	Unmodified	_EFPPGTPRF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2665283083916	2	524.266542	1046.51853	2.2694	0.0011898	1.9044	0.00099843	4.1739	0.0021882	524.2676668352287	43.959	0.71569	45.313	44.978	45.694	1.3536					32	22	2	0	0	0	0.35391	3	18437	18437;18497;18555		22.736	7.898	1	1250300			3797	5388	1837	1849	4643;4644;4645	4643					-0.0028681272824542248
EFPPGTPRF	9	Unmodified	_EFPPGTPRF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2666503787041	2	524.266542	1046.51853	1.9656	0.0010305	-0.70862	-0.0003715	1.257	0.00065901	524.2663028820707	41.219	2.5845	43.111	41.645	44.229	1.8927					159	82	3	0	0	0	0.1109	8	17550	16892;16976;17081;17133;17186;17235;17432;17550		45.7	18.816	1	1760200			3798	5388	1837	1849	4646;4647;4648;4649;4650;4651;4652;4653	4653					-0.0028681272824542248
EFPPGTPRF	9	Unmodified	_EFPPGTPRF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2671386599541	2	524.266542	1046.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.662	1	45.606	45.106	46.106	1.9438								0	0	0	0.35665	1	18309	18309		13.042	6.3193	1				3799	5388	1837	1849	4654	4654					-0.0028681272824542248
EFPSRGINQ	9	Unmodified	_EFPSRGINQ_					0	0	0			REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2667114138603	2	524.26453	1046.51451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.76	1	41.623	41.123	42.123	1.8624								0	0	0	0.42693	1	16671	16671		3.5965	0.70727	1		+		3800	11651	1838	1850	4655	4655					-0.0068890222196387185
EFQAPFGMEAE	11	Unmodified	_EFQAPFGMEAE_					0	0	0		nc|ENSG00000052802|Q15800-2|MSMO1;ENSG00000052802|ENST00000261507|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.2690307497978	2	628.268621	1254.52269	3.1127	0.0019556	-2.8867	-0.0018136	0.22598	0.00014197	628.267200983727	72.754	0.40697	74.084	73.943	74.35	1.3297					39	12	4	0	0	0	0.29237	1	30566	30566		32.786	2.1491	1	7975200			3801	705	1839	1851	4656	4656					-0.09439136087485167
EFRRRVRREW	10	Unmodified	_EFRRRVRREW_					0	0	0			REV__ENST00000480844.2_1_2:74734258-74734516:-|nuORF	REV__ENST00000480844.2_1_2:74734258-74734516:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	745.4205200076103	2	745.416	1488.81745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.616	1	64.029	63.529	64.529	1.4134								0	0	0	0.66087	1	26258	26258		2.9952	0.49676	1		+		3802	13354	1840	1852	4657	4657					0.09259077956994588
EFTVYGQAPD	10	Unmodified	_EFTVYGQAPD_					0	0	0			REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1126.513964831829	1	1126.50513	1125.49785	2.5909	0.0029187	3.111	0.0035046	5.702	0.0064233	1126.5090423762508	63.074	0.22148	64.487	64.344	64.566	1.4134					10	6	2	0	0	0	0.47063	1	26465	26465		29.082	3.6823	1	775300	+		3803	13642	1841	1853	4658	4658					-0.05987447898564824
EFTVYGQAPD	10	Unmodified	_EFTVYGQAPD_					0	0	0			REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1126.50513	1125.49785	2.5909	0.0029187	3.111	0.0035046	5.702	0.0064233	1126.5090423762508	63.074	0.22148	64.487	64.344	64.566	1.4134	0.01022	-0.0008293	NaN	29.082	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	775300	+		3804	13642	1841	1853							-0.05987447898564824
EFTVYGQAPD	10	Unmodified	_EFTVYGQAPD_					0	0	0			REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	REV__ENST00000523439.1_1_19:57999318-58003198:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1126.50513	1125.49785	2.7573	0.0031061	6.6738	0.0075181	9.4311	0.010624	1126.5135459426867	62.522	0.15698	64.467	64.375	64.532	1.9444	-0.01022	0.0031842	NaN	29.082	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426860	+		3805	13642	1841	1853							-0.05987447898564824
EFVAKGHLF	9	Unmodified	_EFVAKGHLF_					0	0	0		ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7856933474541	2	524.284734	1046.55492	0.71758	0.00037621	0.52189	0.00027362	1.2395	0.00064983	524.2850011543037	31.941	0.25726	33.222	33.049	33.307	1.2813					15	8	2	0	0	0	0.10294	1	13396	13396		48.346	16.229	1	1395900			3806	2460	1842	1854	4659	4659					0.03350064168466815
EFVAKGHLF	9	Unmodified	_EFVAKGHLF_					0	0	0		ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2864868044853	2	524.284734	1046.55492	0.86668	0.00045439	-0.058014	-3.0416E-05	0.80866	0.00042397	524.7863092626891	31.334	0.25566	33.159	33.046	33.302	1.8246					18	8	3	0	0	0	0.076627	1	13118	13118		57.471	17.023	1	1262300			3807	2460	1842	1854	4660	4660					0.03350064168466815
EFVTSPAR	8	Unmodified	_EFVTSPAR_					0	0	0		ENST00000218056.9_1_X:48455883-48456297:+|nuORF	ENST00000218056.9_1_X:48455883-48456297:+|nuORF	ENST00000218056.9_1_X:48455883-48456297:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7414123415947	2	453.737617	905.460681	2.4918	0.0011306	3.7889	0.0017192	6.2807	0.0028498	453.73999081564443	64.66	0.5711	64.987	64.591	65.162	0.32689					42	17	3	0	0	0	0.8873	1	27006	27006		4.3292	1.7518	1	1314500			3808	5524	1843	1855	4661	4661					0.004169253463260247
EFWDCSNAEF	10	Unmodified	_EFWDCSNAEF_					0	0	0			REV__ENSG00000204740|ENST00000454679|MALRD1	REV__ENSG00000204740|ENST00000454679|MALRD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2389404177666	2	624.237321	1246.46009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.675	1	76.456	75.956	76.956	1.7817								0	0	0	0.66176	1	31323	31323		1.4819	0.15237	1		+		3809	11801	1844	1856	4662	4662					-0.15328282155701345
EFYNKWYPR	9	Unmodified	_EFYNKWYPR_					0	0	0			REV__ENSG00000138175|ENST00000260746|ARL3	REV__ENSG00000138175|ENST00000260746|ARL3	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825561404228	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.971	1	15.084	14.584	15.584	0.11295								0	0	0	0.42693	1	6213	6213		0.96228	0.26461	1		+		3810	10051	1845	1857	4663	4663					-0.019437807453869027
EGARSSQAG	9	Unmodified	_EGARSSQAG_					0	0	0			REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	862.4007446169853	1	862.401335	861.394058	2.3163	0.0019976	-0.85066	-0.00073361	1.4657	0.001264	862.4004520486098	77.777	0.49763	79.057	78.791	79.289	1.2809					40	15	3	0	0	0	0.46566	2	32588	32588;32674		17.113	17.113	1	6444100	+		3811	14495	1846	1858	4664;4665	4664					-0.0421831021556045
EGARSSQAG	9	Unmodified	_EGARSSQAG_					0	0	0			REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	862.4018432497978	1	862.401335	861.394058	1.7134	0.0014776	-0.5219	-0.00045008	1.1915	0.0010276	862.4009793380766	78.073	0.49662	79.825	79.59	80.086	1.7514					34	15	3	0	0	0	0.35391	1	32717	32717		22.736	0.98964	1	5333400	+		3812	14495	1846	1858	4666	4666					-0.0421831021556045
EGDMHLLS	8	Unmodified	_EGDMHLLS_					0	0	0		ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	ENSG00000128731|ENST00000261609|HERC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1419860720634	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.02	1	81.737	81.237	82.237	1.7167								0	0	0	1.0178	1	33561	33561		0.40072	0	1				3813	2382	1847	1859	4667	4667					-0.05306713659342677
EGDTYAGG	8	Unmodified	_EGDTYAGG_					0	0	0			REV__nc|ENSG00000105289|O95049-5|TJP3	REV__nc|ENSG00000105289|O95049-5|TJP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	385.1534606814384	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.61	1	102.61	102.11	103.11	0								0	0	0	1.0178	1	43001	43001		0.79363	0	1		+		3814	9165	1848	1860	4668	4668					-0.10080181638124941
EGDTYAGG	8	Unmodified	_EGDTYAGG_					0	0	0			REV__nc|ENSG00000105289|O95049-5|TJP3	REV__nc|ENSG00000105289|O95049-5|TJP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	385.1543762087822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.78	1	102.78	102.28	103.28	0								0	0	0	1.0178	1	43082	43082		0.79363	0	1		+		3815	9165	1848	1860	4669	4669					-0.10080181638124941
EGELRERDF	9	Unmodified	_EGELRERDF_					0	0	0		tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7784301638603	2	575.778002	1149.54145	2.2019	0.0012678	3.0831	0.0017752	5.285	0.003043	575.7799534651151	44.357	0.47591	46.316	46.1	46.576	1.9596					27	14	2	0	0	0	0.70108	1	18653	18653		7.2892	0.56607	1	923900			3816	16182	1849	1861	4670	4670					-0.027338384014456096
EGESLLLSV	9	Unmodified	_EGESLLLSV_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	316.1759216189384	3	316.174569	945.501877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.077	1	41.387	40.887	41.887	1.3102								0	0	0	0.42693	1	16811	16811		1.0715	0	1				3817	2341	1850	1862	4671	4671					0.026946415951670133
EGEVLVRR	8	Unmodified	_EGEVLVRR_					0	0	0		ENST00000286181.7_1_2:201845995-201881890:-|nuORF;ENSG00000155744|ENST00000681958|HYCC2	ENST00000286181.7_1_2:201845995-201881890:-|nuORF	ENST00000286181.7_1_2:201845995-201881890:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2785217165947	2	479.277441	956.540328	2.5713	0.0012324	-0.92607	-0.00044385	1.6453	0.00078854	479.27720759044763	79.452	0.75487	79.753	79.217	79.972	0.30046					45	23	3	0	0	0	0.89008	1	33144	33144		2.5775	0	1	1958700			3818	3426	1851	1863	4672	4672					0.060319920203255606
EGFVSFLVI	9	Unmodified	_EGFVSFLVI_					0	0	0		ENST00000489207.1_1_14:74766659-74769646:-|nuORF	ENST00000489207.1_1_14:74766659-74769646:-|nuORF	ENST00000489207.1_1_14:74766659-74769646:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1010.55919188261	1	1010.55571	1009.54843	2.5536	0.0025805	0.82692	0.00083565	3.3805	0.0034162	1010.5558239634397	79.46	0.40682	80.711	80.456	80.863	1.2512					17	12	2	0	0	0	0.12174	1	33381	33381		42.095	3.9434	1	2451600			3819	6895	1852	1864	4673	4673					0.04404126217082194
EGGYLRES	8	Unmodified	_EGGYLRES_					0	0	0			REV__tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	REV__tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	910.4294311404228	1	910.426487	909.41921	3.0979	0.0028204	-1.3592	-0.0012375	1.7386	0.0015829	910.4262321082822	105.1	0.084221	105.27	105.21	105.3	0.16679					7	3	3	0	0	0	0.88587	1	44632	44632		5.2307	0	1	38376000	+		3820	15601	1853	1865	4674	4674					-0.03912255412990362
EGGYLRES	8	Unmodified	_EGGYLRES_					0	0	0			REV__tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	REV__tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	910.426487	909.41921	3.0979	0.0028204	-1.3592	-0.0012375	1.7386	0.0015829	910.4262321082822	105.1	0.084221	105.27	105.21	105.3	0.16679	-0.017972	-0.00016302	NaN	5.2307	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38376000	+		3821	15601	1853	1865							-0.03912255412990362
EGHEGDKY	8	Unmodified	_EGHEGDKY_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MSMS	GG20161007_CRH_Patient100_A02_02	2	312.1355773806572	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.811	1	61.139	60.639	61.639	0.32809								0	0	0	1.0178	1	25479	25479		0.45834	0	1		+		3822	14463	1854	1866	4675	4675					-0.08653132309700595
EGHEGDKY	8	Unmodified	_EGHEGDKY_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MSMS	GG20161007_CRH_Patient100_A02_02	2	312.1354553103447	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.998	1	61.328	60.828	61.828	0.32974								0	0	0	1.0178	1	25557	25557		0.45834	0	1		+		3823	14463	1854	1866	4676	4676					-0.08653132309700595
EGHEGDKY	8	Unmodified	_EGHEGDKY_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MSMS	GG20161007_CRH_Patient100_A02_02	2	312.1354553103447	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.246	1	61.576	61.076	62.076	0.32974								0	0	0	1.0178	1	25661	25661		0.45834	0	1		+		3824	14463	1854	1866	4677	4677					-0.08653132309700595
EGHEGDKY	8	Unmodified	_EGHEGDKY_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MSMS	GG20161007_CRH_Patient100_W632_02	4	312.1352111697197	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.731	1	24.382	23.882	24.882	1.6511								0	0	0	1.0178	1	9490	9490		0.45834	0	1		+		3825	14463	1854	1866	4678	4678					-0.08653132309700595
EGICGRCFNHK	11	Unmodified	_EGICGRCFNHK_					0	0	0			REV__ENSG00000171206|ENST00000643721|TRIM8	REV__ENSG00000171206|ENST00000643721|TRIM8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	632.2942993044853	2	632.289699	1262.56485	1.525	0.00096422	3.9592	0.0025034	5.4842	0.0034676	632.2922136837522	28.923	0.21322	28.923	28.779	28.993	0					11	6	2	0	0	0	0.92747	1	12096	12096		8.1555	0.54658	1	466020	+		3826	11016	1855	1867	4679	4679					-0.055934391601340394
EGIEMGVAG	9	Unmodified	_EGIEMGVAG_					0	0	0		ENST00000492039.6_1_2:68352461-68384592:-|nuORF;ENSG00000243667|ENST00000295121|DNAAF10	ENST00000492039.6_1_2:68352461-68384592:-|nuORF	ENST00000492039.6_1_2:68352461-68384592:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	862.4023315310478	1	862.397495	861.390218	1.024	0.00088306	3.4805	0.0030016	4.5045	0.0038847	862.40038119006	77.432	0.49039	79.183	78.946	79.437	1.7514					37	15	3	0	0	0	0.19075	3	32473	32428;32473;32516		34.102	7.2188	1	6335500			3827	5354	1856	1868	4680;4681;4682	4681					-0.046021160336295
EGKTMEFYCE	10	Unmodified	_EGKTMEFYCE_					0	0	0		nc|ENSG00000110171|O75382-3|TRIM3;nc|ENSG00000110171|O75382-2|TRIM3;ENSG00000110171|ENST00000345851|TRIM3	nc|ENSG00000110171|O75382-3|TRIM3	nc|ENSG00000110171|O75382-3|TRIM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	618.7514526247978	2	618.749207	1235.48386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.384	1	19.832	19.332	20.332	1.448								0	0	0	0.66052	1	7646	7646		3.5965	0.31518	1				3828	1699	1857	1869	4683	4683					-0.12446184713508046
EGLREYTSKH	10	Unmodified	_EGLREYTSKH_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	407.2068054080009	3	407.207043	1218.5993	0.28736	0.00011702	0.16524	6.7287E-05	0.4526	0.0001843	407.20661162691835	11.359	0.2492	11.442	11.331	11.581	0.082325					15	7	3	0	0	0	0.85617	1	4704	4704		6.1918	0.89496	1	1019800	+		3829	9861	1858	1870	4684	4684					-0.0012557647601170174
EGLREYTSKH	10	Unmodified	_EGLREYTSKH_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	407.207043	1218.5993	0.28736	0.00011702	0.16524	6.7287E-05	0.4526	0.0001843	407.20661162691835	11.359	0.2492	11.442	11.331	11.581	0.082325	0.13279	6.8962E-05	NaN	6.1918	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1019800	+		3830	9861	1858	1870							-0.0012557647601170174
EGLREYTSKH	10	Unmodified	_EGLREYTSKH_					0	0	0			REV__ENSG00000132793|ENST00000373257|LPIN3	REV__ENSG00000132793|ENST00000373257|LPIN3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	407.207043	1218.5993	-0.053895	-2.1947E-05	-0.12191	-4.9641E-05	-0.1758	-7.1588E-05	407.20720048379974	10.431	0.2162	11.176	11.097	11.313	0.74462	-0.13279	-0.00028182	NaN	6.1918	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263170	+		3831	9861	1858	1870							-0.0012557647601170174
EGNTTQRG	8	Unmodified	_EGNTTQRG_					0	0	0			REV__ENST00000396613.7_1_9:36163095-36163176:+|nuORF	REV__ENST00000396613.7_1_9:36163095-36163176:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	862.4011718630791	1	862.401335	861.394058	2.4949	0.0021516	-0.81033	-0.00069883	1.6846	0.0014528	862.4005861806038	78.415	0.45819	79.682	79.421	79.879	1.2668					38	14	4	0	0	0	0.79422	1	32975	32975		21.747	2.4897	1	6061800	+		3832	12853	1859	1871	4685	4685					-0.0421831021556045
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	375.5051757693291	3	375.505089	1123.49344	0.0032641	1.2257E-06	0.39253	0.0001474	0.3958	0.00014862	375.5053196565467	9.8875	2.0361	9.9654	8.772	10.808	0.077971					304	107	5	0	0	0	0.79426	3	4256	3949;4256;4313		12.873	12.873	1	23466000	+		3833	14288	1860	1872	4686;4687;4688	4687					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	375.5052978396416	3	375.505089	1123.49344	0.021951	8.2427E-06	0.74739	0.00028065	0.76934	0.00028889	375.5054780192909	11.606	3.7894	11.688	10.628	14.417	0.082325					313	122	4	0	0	0	0.83036	5	4466	4466;4514;4605;4956;5199		8.9762	8.9762	1	6847700	+		3834	14288	1860	1872	4689;4690;4691;4692;4693	4689					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	375.5053283572197	3	375.505089	1123.49344	-1.2557	-0.00047151	0.84656	0.00031789	-0.40912	-0.00015362	375.5054526692021	7.9153	1.4318	8.5425	8.4065	9.8384	0.62713					193	103	3	0	0	0	0.83036	3	3254	3254;3301;3436		8.9762	8.9762	1	3360500	+		3835	14288	1860	1872	4694;4695;4696	4694					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	375.5048095583916	3	375.505089	1123.49344	-1.2554	-0.00047142	0.7836	0.00029425	-0.47183	-0.00017718	375.5054510614093	10.525	1.7892	11.195	9.8806	11.67	0.66934					172	71	4	0	0	0	0.83036	7	4050	4050;4106;4155;4207;4373;4421;4467		8.9762	8.9762	1	4181400	+		3836	14288	1860	1872	4697;4698;4699;4700;4701;4702;4703	4697					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5052062869072	3	375.505089	1123.49344	-0.24977	-9.379E-05	0.56561	0.00021239	0.31584	0.0001186	375.50536287376195	6.6395	2.3826	7.3702	6.6567	9.0393	0.73074					294	176	3	0	0	0	0.83036	2	2838	2838;3007		8.9762	8.9762	1	1880900	+		3837	14288	1860	1872	4704;4705	4704					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5050842165947	3	375.505089	1123.49344	-0.24944	-9.3666E-05	0.069915	2.6253E-05	-0.17952	-6.7412E-05	375.50514839401285	10.474	0.9402	11.226	10.61	11.55	0.75201					92	34	4	0	0	0	0.83036	1	4334	4334		8.9762	8.9762	1	2586300	+		3838	14288	1860	1872	4706	4706					-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	375.505089	1123.49344	0.0023855	8.9578E-07	0.18634	6.9973E-05	0.18873	7.0869E-05	375.5052273347366	7.1106	1.1707	7.1869	6.77	7.9407	0.07632	-0.091648	-0.00036492	NaN	8.9762	90	66	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	608890	+		3839	14288	1860	1872							-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	375.505089	1123.49344	0.0024208	9.0901E-07	0.0076879	2.8868E-06	0.010109	3.7959E-06	375.505155610778	8.6204	0.22263	8.6967	8.5478	8.7704	0.076321	0.077118	-0.00080972	NaN	8.9762	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305550	+		3840	14288	1860	1872							-0.06336912321489763
EGPYYGSSHK	10	Unmodified	_EGPYYGSSHK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|107|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	375.505089	1123.49344	-1.2557	-0.00047151	0.84656	0.00031789	-0.40912	-0.00015362	375.5054526692021	7.9153	1.4318	8.5425	8.4065	9.8384	0.62713	-0.077118	0.00013528	NaN	8.9762	193	103	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3360500	+		3841	14288	1860	1872							-0.06336912321489763
EGQTARGGS	9	Unmodified	_EGQTARGGS_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2;nc|ENSG00000143970|Q76L83-2|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	862.4011718630791	1	862.401335	861.394058	1.7134	0.0014776	-0.5219	-0.00045008	1.1915	0.0010276	862.4009793380766	78.073	0.49662	79.825	79.59	80.086	1.7514					34	15	3	0	0	0	0.35391	1	32765	32765		22.736	0	1	5333400			3842	3060	1861	1873	4707	4707					-0.0421831021556045
EGRHSLFTLF	10	Unmodified	_EGRHSLFTLF_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1801940798759	3	402.880379	1205.61931	0.81832	0.00032969	2.859	0.0011518	3.6773	0.0014815	402.88191025553607	54.852	0.43699	56.821	56.61	57.047	1.9684					31	14	3	0	0	0	0.12557	1	22984	22984		1.7423	0	1	2511400	+		3843	10779	1862	1874	4708	4708					0.024722192546050792
EGRRRRRRRSS	11	Unmodified	_EGRRRRRRRSS_					0	0	0		ENST00000392701.7_1_2:166650587-166650761:-|nuORF	ENST00000392701.7_1_2:166650587-166650761:-|nuORF	ENST00000392701.7_1_2:166650587-166650761:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	736.4337036013603	2	736.430504	1470.84646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.549	1	58.964	58.464	59.464	1.4145								0	0	0	0.63775	1	24127	24127		1.1933	0.79263	1				3844	6261	1863	1875	4709	4709					0.12986615305976557
EGRRRRRRRSS	11	Unmodified	_EGRRRRRRRSS_					0	0	0		ENST00000392701.7_1_2:166650587-166650761:-|nuORF	ENST00000392701.7_1_2:166650587-166650761:-|nuORF	ENST00000392701.7_1_2:166650587-166650761:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	736.4335815310478	2	736.430504	1470.84646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.189	1	59.157	58.657	59.657	1.9684								0	0	0	0.63775	1	23990	23990		1.1933	0.84271	1				3845	6261	1863	1875	4710	4710					0.12986615305976557
EGRSRWRTWG	10	Unmodified	_EGRSRWRTWG_					0	0	0		ENST00000417917.1_1_1:1366280-1369881:-|nuORF;ENST00000430109.1_1_1:1365960-1369881:-|nuORF	ENST00000417917.1_1_1:1366280-1369881:-|nuORF	ENST00000417917.1_1_1:1366280-1369881:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8875305056572	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.73	1	16.769	16.269	17.269	1.0392								0	0	0	0.66218	1	6527	6527		0.77653	0	1				3846	6422	1864	1876	4711	4711					0.004517739491802786
EGSPIKVTL	9	Unmodified	_EGSPIKVTL_					0	0	0		nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000438918.1_1_2:204637659-204638058:-|nuORF	nc|ENSG00000181163|P06748-3|NPM1	nc|ENSG00000181163|P06748-3|NPM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2771789431572	2	472.276575	942.538597	2.3129	0.0010923	-0.70332	-0.00033216	1.6096	0.00076018	472.27604546940796	39.038	0.40636	40.334	40.101	40.507	1.2961					28	12	3	0	0	0	0.010585	3	16370	16326;16370;16423		106.94	35.018	1	7026400			3847	4570	1865	1877	4712;4713;4714	4713					0.06502938211713172
EGSPIKVTL	9	Unmodified	_EGSPIKVTL_					0	0	0		nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000518587.1_1_5:170814889-170819841:+|nuORF;ENST00000521260.1_1_5:170818338-170818467:+|nuORF;ENST00000513394.1_1_8:57014234-57014760:-|nuORF;ENST00000502784.2_1_5:93019019-93019256:-|nuORF;ENST00000438918.1_1_2:204637659-204638058:-|nuORF	nc|ENSG00000181163|P06748-3|NPM1	nc|ENSG00000181163|P06748-3|NPM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2774841189384	2	472.276575	942.538597	1.448	0.00068384	0.41933	0.00019804	1.8673	0.00088188	472.2765317148156	38.448	0.44019	40.285	40.053	40.493	1.8366					31	13	3	0	0	0	0.02878	3	16123	16072;16123;16174		89.401	33.224	1	4333700			3848	4570	1865	1877	4715;4716;4717	4716					0.06502938211713172
EGSPQEEEEE	10	Unmodified	_EGSPQEEEEE_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1520263552666	3	388.150929	1161.43096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.33	1	23.946	23.446	24.446	1.6158								0	0	0	0.66254	1	9318	9318		0.15932	0.064481	1				3849	4559	1866	1878	4718	4718					-0.1433014797096348
EGTIIIWT	8	Unmodified	_EGTIIIWT_					0	0	0			REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1	REV__nc|ENSG00000183117|Q96PZ7-4|CSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	932.5148803591728	1	932.50876	931.501483	3.3499	0.0031238	4.4002	0.0041032	7.7501	0.007227	932.5125862394202	70.729	0.34895	72.083	71.873	72.222	1.3536					17	10	2	0	0	0	0.62161	1	29714	29714		38.151	2.107	1	2737100	+		3850	8412	1867	1879	4719	4719					0.032992666659424685
EGWRSDSD	8	Unmodified	_EGWRSDSD_					0	0	0		DCAF5|p.S431R|1|0.12|ENSG00000139990|chr14:69055393-69055393|G/C|missense_variant	DCAF5|p.S431R|1|0.12|ENSG00000139990|chr14:69055393-69055393|G/C|missense_variant	DCAF5|p.S431R|1|0.12|ENSG00000139990|chr14:69055393-69055393|G/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.1934997439384	2	476.193771	950.372988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.81	1	103.97	103.47	104.47	0.16055								0	0	0	1.0178	1	43849	43849		5.2307	2.6532	1				3851	392	1868	1880	4720	4720					-0.10418320315091023
EHCLMCPNNY	10	Unmodified	_EHCLMCPNNY_					0	0	0			REV__ENSG00000133710|ENST00000256084|SPINK5	REV__ENSG00000133710|ENST00000256084|SPINK5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.4913207888603	3	408.492921	1222.45693	-0.60629	-0.00024767	-1.473	-0.00060171	-2.0793	-0.00084937	408.4924791847672	16.812	0.47012	16.812	16.626	17.096	0					40	14	4	0	0	0	0.88022	1	7009	7009		1.7423	0.14999	1	1345800	+		3852	9882	1869	1881	4721	4721					-0.1453957180569887
EHFDEYMYN	9	Unmodified	_EHFDEYMYN_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MSMS	GG20161007_CRH_Patient100_A02_02	2	624.2363769412041	2	624.237321	1246.46009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3797	1	6.4596	5.9596	6.9596	0.079923								0	0	0	0.42693	1	2637	2637		0.6015	0.076735	1		+		3853	9529	1870	1882	4722	4722					-0.15328282155678608
EHFDEYMYN	9	Unmodified	_EHFDEYMYN_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MSMS	GG20161007_CRH_Patient100_A02_02	2	624.2360717654228	2	624.237321	1246.46009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.637	1	22.871	22.371	23.371	0.23306								0	0	0	0.42693	1	9436	9436		0.6015	0.076735	1		+		3854	9529	1870	1882	4723	4723					-0.15328282155678608
EHFDEYMYN	9	Unmodified	_EHFDEYMYN_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.2363159060478	2	624.237321	1246.46009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.283	1	10.933	10.433	11.433	0.65058								0	0	0	0.42693	1	4277	4277		0.6015	0.076735	1		+		3855	9529	1870	1882	4724	4724					-0.15328282155678608
EHFDEYMYN	9	Unmodified	_EHFDEYMYN_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2373535037041	2	624.237321	1246.46009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2755	1	3.0239	2.5239	3.5239	0.7484								0	0	0	0.42693	1	943	943		0.6015	0	1		+		3856	9529	1870	1882	4725	4725					-0.15328282155678608
EHFENHWK	8	Unmodified	_EHFENHWK_					0	0	0		nc|nan|Q96CB5|C8orf44	nc|nan|Q96CB5|C8orf44	nc|nan|Q96CB5|C8orf44	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	375.5057556033134	3	376.173674	1125.49919	-1.7745	-0.00066753	0.25457	9.5761E-05	-1.52	-0.00057177	376.17381859918294	10.198	2.4232	10.198	9.4572	11.88	0					187	81	3	0	0	0	2.3239	1	4101	4101		10.074	0	1	21849000			3857	8033	1871	1883	4726	4726					-0.058537690191542424
EHGDQDYIW	9	Unmodified	_EHGDQDYIW_					0	0	0		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6;ENST00000550040.1_1_12:50153009-50155568:+|nuORF	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.7452270388603	2	581.743628	1161.4727	0.71746	0.00041738	-0.48838	-0.00028411	0.22908	0.00013326	581.7435205428211	36.058	0.17714	37.876	37.798	37.976	1.8176					13	8	2	0	0	0	0.25667	1	15122	15122		27.629	16.805	1	757090			3858	2885	1872	1884	4727	4727					-0.10157502701144949
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.275	1	11.275	10.775	11.775	0								0	0	0	0.42693	1	4657	4657		2.7352	1.4056	1				3859	2007	1873	1885	4728	4728					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8891479372978	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.976	1	15.976	15.476	16.476	0								0	0	0	0.42693	1	6634	6634		1.1933	0.41681	1				3860	2007	1873	1885	4729	4729					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.848	1	17.848	17.348	18.348	0								0	0	0	0.42693	1	7412	7412		1.1933	0.12188	1				3861	2007	1873	1885	4730	4730					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.507	1	11.589	11.089	12.089	0.082325								0	0	0	0.42693	1	4774	4774		1.0715	0.29493	1				3862	2007	1873	1885	4731	4731					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.744	1	15.874	15.374	16.374	0.13022								0	0	0	0.42693	1	6533	6533		0.23584	0	1				3863	2007	1873	1885	4732	4732					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881713747978	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9759	1	10.626	10.126	11.126	0.65058								0	0	0	0.42693	1	4149	4149		1.0715	0.29493	1				3864	2007	1873	1885	4733	4733					0.00853863442898728
EHHLRYWLH	9	Unmodified	_EHHLRYWLH_					0	0	0		nc|ENSG00000117411|O60909-2|B4GALT2;ENSG00000117411|ENST00000372324|B4GALT2;nc|ENSG00000117411|O60909-3|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877136111259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7346	1	10.479	9.9792	10.979	0.74462								0	0	0	0.42693	1	4053	4053		1.0715	0	1				3865	2007	1873	1885	4734	4734					0.00853863442898728
EHICTSDNWMD	11	Unmodified	_EHICTSDNWMD_					0	0	0		ENSG00000181552|ENST00000326783|EDDM3B	ENSG00000181552|ENST00000326783|EDDM3B	ENSG00000181552|ENST00000326783|EDDM3B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	450.2367736697197	3	450.841155	1349.50164	0.59028	0.00026612	4.2109	0.0018984	4.8012	0.0021646	450.84139576242836	16.769	0.15702	16.769	16.659	16.816	0					7	4	2	0	0	0	0.14606	1	6978	6978		2.6312	0	1	369060			3866	4581	1874	1886	4735	4735					-0.15913469458678264
EHKRLYRV	8	Unmodified	_EHKRLYRV_					0	0	0		tr|A0A553SLG2|A0A553SLG2_NIACISmallribosomalsubunitbiogenesisGTPaseRsgAOS=NialliacirculansOX=1397GN=rsgAPE=3SV=1	tr|A0A553SLG2|A0A553SLG2_NIACISmallribosomalsubunitbiogenesisGTPaseRsgAOS=NialliacirculansOX=1397GN=rsgAPE=3SV=1	tr|A0A553SLG2|A0A553SLG2_NIACISmallribosomalsubunitbiogenesisGTPaseRsgAOS=NialliacirculansOX=1397GN=rsgAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2220336794853	2	550.819807	1099.62506	0.85321	0.00046996	-0.046057	-2.5369E-05	0.80715	0.00044459	550.81886617996	99.93	0.092972	99.93	99.883	99.976	0					4	2	2	0	0	0	2.3239	1	41817	41817		0.79363	0.26887	1	860340			3867	16331	1875	1887	4736	4736					0.07923362556925895
EHLCFEKETK	10	Unmodified	_EHLCFEKETK_					0	0	0			REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.8716918826103	3	421.872784	1262.59652	-0.18676	-7.8788E-05	-2.5318	-0.0010681	-2.7185	-0.0011469	422.2057031770523	17.825	0.40234	17.825	17.593	17.996	0					21	12	2	0	0	0	0.88031	1	7373	7373		3.5871	0	1	646240	+		3868	13766	1876	1888	4737	4737					-0.024271679252024114
EHLCFEKETK	10	Unmodified	_EHLCFEKETK_					0	0	0			REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	421.872784	1262.59652	-0.18676	-7.8788E-05	-2.5318	-0.0010681	-2.7185	-0.0011469	422.2057031770523	17.825	0.40234	17.825	17.593	17.996	0	-0.0075796	0.00074342	NaN	3.5871	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646240	+		3869	13766	1876	1888							-0.024271679252024114
EHLCFEKETK	10	Unmodified	_EHLCFEKETK_					0	0	0			REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	REV__ENST00000538765.2_1_16:3340632-3340839:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	421.872784	1262.59652	0.74513	0.00031435	-5.5426	-0.0023383	-4.7975	-0.0020239	421.87090872876536	17.668	0.30585	17.84	17.647	17.953	0.17285	0.0075796	-0.0030672	NaN	3.5871	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411740	+		3870	13766	1876	1888							-0.024271679252024114
EHPVKQELER	10	Unmodified	_EHPVKQELER_					0	0	0		ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	316.2116882205009	4	316.921564	1263.65715	-0.6115	-0.0001938	-0.25935	-8.2195E-05	-0.87085	-0.00027599	316.9215708634219	11.259	0.37178	12.021	11.853	12.225	0.76165					27	11	3	0	0	0	0.12535	1	4671	4671		1.7423	0	1	3052200			3871	4989	1877	1889	4738	4738					0.03586685449408833
EHQSGAWCK	9	Unmodified	_EHQSGAWCK_					0	0	0		ENSG00000072071|ENST00000361434|ADGRL1;nc|ENSG00000072071|O94910|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	349.1540099978447	3	349.155514	1044.44471	-2.4595	-0.00085874	-1.3643	-0.00047637	-3.8238	-0.0013351	349.1552246375678	13.097	0.18653	13.097	12.99	13.177	0					11	5	3	0	0	0	0.57699	1	5437	5437		12.241	3.4953	1	409780			3872	877	1878	1890	4739	4739					-0.07573104162224809
EHSFEVWC	8	Unmodified	_EHSFEVWC_					0	0	0			REV__nc|ENSG00000100150|O75140-6|DEPDC5	REV__nc|ENSG00000100150|O75140-6|DEPDC5	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.1425659060478	3	346.144615	1035.41202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2601	1	8.2601	7.7601	8.7601	0								0	0	0	1.0178	1	3397	3397		3.5965	0.8613	1		+		3873	8969	1879	1891	4740	4740					-0.10427311285070573
EHTQAQVSF	9	Unmodified	_EHTQAQVSF_					0	0	0		ENST00000583043.5_1_18:67684852-67806940:-|nuORF;nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN	ENST00000583043.5_1_18:67684852-67806940:-|nuORF	ENST00000583043.5_1_18:67684852-67806940:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7443725466728	2	523.748713	1045.48287	0.72743	0.00038099	-4.1463	-0.0021716	-3.4189	-0.0017906	523.7454979698592	51.206	0.30535	52.599	52.468	52.773	1.3938					22	9	3	0	0	0	0.17276	1	21465	21465		36.127	2.0246	1	2966100			3874	4400	1880	1892	4741	4741					-0.038048949759058814
EHVHLTVHRH	10	Unmodified	_EHVHLTVHRH_					0	0	0			REV__ENSG00000143341|ENST00000271588|HMCN1	REV__ENSG00000143341|ENST00000271588|HMCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2274658083916	3	422.226772	1263.65849	0.056724	2.395E-05	-0.74129	-0.00031299	-0.68456	-0.00028904	422.22658069343476	11.259	0.68429	12.021	11.731	12.416	0.76165					44	21	4	0	0	0	0.81324	1	4752	4752		6.1918	0	1	9323100	+		3875	10203	1881	1893	4742	4742					0.03720364328842152
EHVHRRFLPFE	11	Unmodified	_EHVHRRFLPFE_					0	0	0		ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	367.4457885622978	4	367.446743	1465.75787	-1.9412	-0.00071327	-0.68598	-0.00025206	-2.6271	-0.00096534	367.4464131463266	13.298	0.24647	13.298	13.146	13.393	0					21	7	4	0	0	0	0.96769	1	5494	5494		2.6312	1.3016	1	3635500			3876	2720	1882	1894	4743	4743					0.04361762222924881
EHVHRRFLPFE	11	Unmodified	_EHVHRRFLPFE_					0	0	0		ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	367.4454223513603	4	367.446743	1465.75787	0.016151	5.9347E-06	-2.9955	-0.0011007	-2.9794	-0.0010948	367.44555807514416	13.101	0.25285	13.201	13.059	13.312	0.09944					17	7	3	0	0	0	0.96769	1	5442	5442		2.6312	0.19645	1	4989900			3877	2720	1882	1894	4744	4744					0.04361762222924881
EHVHRRFLPFE	11	Unmodified	_EHVHRRFLPFE_					0	0	0		ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	ENSG00000136367|ENST00000419474|ZFHX2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	367.446743	1465.75787	-1.1924	-0.00043815	-1.7951	-0.0006596	-2.9875	-0.0010977	367.44604947870016	12.813	0.18967	13.525	13.365	13.555	0.71243	0.18393	-3.7842E-05	NaN	2.6312	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	782280			3878	2720	1882	1894							0.04361762222924881
EHWEEYLRKWH	11	Unmodified	_EHWEEYLRKWH_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.2595703005791	3	538.26003	1611.75826	0.46984	0.00025289	-0.81717	-0.00043985	-0.34734	-0.00018696	538.5935413994752	14.668	0.24746	14.668	14.534	14.781	0					21	7	4	0	0	0	1.0402	1	6084	6084		0.08335	0	1	1885000			3879	2472	1883	1895	4745	4745					-0.023148628479020772
EHWEEYLRKWH	11	Unmodified	_EHWEEYLRKWH_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	538.26003	1611.75826	0.46984	0.00025289	-0.81717	-0.00043985	-0.34734	-0.00018696	538.5935413994752	14.668	0.24746	14.668	14.534	14.781	0	-0.032006	0.0008233	NaN	0.08335	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1885000			3880	2472	1883	1895							-0.023148628479020772
EHWEEYLRKWH	11	Unmodified	_EHWEEYLRKWH_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	538.26003	1611.75826	0.33875	0.00018233	-4.5618	-0.0024554	-4.2231	-0.0022731	538.2568812334513	14.619	0.15355	14.732	14.635	14.789	0.11295	0.032006	-0.0052235	NaN	0.08335	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	339470			3881	2472	1883	1895							-0.023148628479020772
EHYEEEEE	8	Unmodified	_EHYEEEEE_					0	0	0		ENSG00000173905|ENST00000470487|GOLIM4	ENSG00000173905|ENST00000470487|GOLIM4	ENSG00000173905|ENST00000470487|GOLIM4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.8382446169853	2	547.201458	1092.38836	1.2266	0.00067122	-3.6416	-0.0019927	-2.415	-0.0013215	547.7006259664612	83.832	0.28818	85.02	84.827	85.115	1.1879					11	8	2	0	0	0	2.3239	1	35193	35193		5.7604	1.0044	1	635390			3882	4306	1884	1896	4746	4746					-0.15413498308566886
EIAVIPLAVL	10	Unmodified	_EIAVIPLAVL_					0	0	0			REV__ENST00000519894.1_1_1:224301987-224318335:+|nuORF	REV__ENST00000519894.1_1_1:224301987-224318335:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5590392947197	3	346.558354	1036.65323	1.2449	0.00043143	2.0592	0.00071363	3.3041	0.0011451	346.55908020635275	65.647	0.58287	67.046	66.757	67.34	1.3989					49	18	3	0	0	0	0.89803	1	27492	27492		0.69767	0	1	2533300	+		3883	10222	1885	1897	4747	4747					0.13637247693668542
EICKCLLAI	9	Unmodified	_EICKCLLAI_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-5|SFI1	REV__nc|ENSG00000198089|A8K8P3-5|SFI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2802001833916	2	503.277206	1004.53986	2.7717	0.0013949	3.3806	0.0017014	6.1523	0.0030963	503.27885259519473	50.269	0.65713	51.66	51.387	52.044	1.3911					37	20	2	0	0	0	0.20671	1	21061	21061		32.305	0	1	3947800	+		3884	11702	1886	1898	4748	4748					0.037771129845964424
EIDAILLSI	9	Unmodified	_EIDAILLSI_					0	0	0			REV__tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	REV__tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	493.7450439333916	2	493.792058	985.569563	3.5106	0.0017335	0.013615	6.7228E-06	3.5242	0.0017402	493.7905124169268	73.097	0.40981	74.427	74.381	74.791	1.3297					18	12	2	0	0	0	0.078322	1	30707	30707		34.102	17.16	1	1519400	+		3885	14836	1887	1899	4749	4749					0.07620091525961925
EIDAILLSI	9	Unmodified	_EIDAILLSI_					0	0	0			REV__tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	REV__tr|A0A553SI49|A0A553SI49_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14205PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	493.792058	985.569563	3.1612	0.001561	-0.51523	-0.00025442	2.646	0.0013066	493.7913482695201	74.131	0.12669	74.456	74.391	74.518	0.32494	0.01455	-0.00014962	NaN	48.346	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187100	+		3886	14836	1887	1899							0.07620091525961925
EIELRMRKNVK	11	Unmodified	_EIELRMRKNVK_					0	0	0		ENST00000475899.1_1_3:193355061-193361921:+|nuORF;nc|ENSG00000198836|O60313-13|OPA1;nc|ENSG00000198836|O60313|OPA1;nc|ENSG00000198836|O60313-9|OPA1;nc|ENSG00000198836|O60313-11|OPA1;nc|ENSG00000198836|O60313-2|OPA1;ENSG00000198836|ENST00000361510|OPA1	ENST00000475899.1_1_3:193355061-193361921:+|nuORF	ENST00000475899.1_1_3:193355061-193361921:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4113647341728	2	708.411203	1414.80785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.971	1	96.373	95.873	96.873	0.40208								0	0	0	0.63775	1	40373	40373		2.7352	0	1				3887	5090	1888	1900	4750	4750					0.11704128836572636
EIESAIIVK	9	Unmodified	_EIESAIIVK_					0	0	0			REV__tr|A0A553STJ2|A0A553STJ2_NIACID-ribosepyranaseOS=NialliacirculansOX=1397GN=rbsDPE=3SV=1	REV__tr|A0A553STJ2|A0A553STJ2_NIACID-ribosepyranaseOS=NialliacirculansOX=1397GN=rbsDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	500.7961303591728	2	501.297507	1000.58046	2.0557	0.0010305	-0.2217	-0.00011114	1.834	0.00091937	501.2980420205789	61.176	0.24612	63.142	63.067	63.313	1.9653					10	7	2	0	0	0	0.060741	1	25662	25662		34.102	0	1	10244000	+		3888	15243	1889	1901	4751	4751					0.08019493900246744
EIEVKPEV	8	Unmodified	_EIEVKPEV_					0	0	0			REV__ENST00000585003.1_1_22:29196897-29197104:+|nuORF	REV__ENST00000585003.1_1_22:29196897-29197104:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.5146362185478	1	942.514239	941.506963	2.3074	0.0021748	0.071938	6.7803E-05	2.3794	0.0022426	942.5136922118216	59.863	0.30604	61.283	61.115	61.421	1.4196					14	9	2	0	0	0	0.38289	1	25100	25100		57.471	5.203	1	1229600	+		3889	14013	1890	1902	4752	4752					0.03386945457771162
EIFKSFLFL	9	Unmodified	_EIFKSFLFL_					0	0	0			REV__ENST00000496932.1_1_1:43830369-43830754:-|nuORF	REV__ENST00000496932.1_1_1:43830369-43830754:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3264037966728	2	572.326068	1142.63758	2.0203	0.0011563	-0.46615	-0.00026679	1.5541	0.00088948	572.3258092224279	84.665	0.49335	85.824	85.655	86.148	1.159					38	15	3	0	0	0	0.057024	1	35555	35555		65.235	13.82	1	6908400	+		3890	8683	1891	1903	4753	4753					0.0719696117660078
EIGQQVLKETY	11	Unmodified	_EIGQQVLKETY_					0	0	0			REV__tr|A0A7D6W1U3|A0A7D6W1U3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04495PE=4SV=1	REV__tr|A0A7D6W1U3|A0A7D6W1U3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04495PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	653.9771606326103	2	654.345717	1306.67688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.813	1	99.038	98.538	99.538	0.22545								0	0	0	0.63775	1	41584	41584		4.5289	0.19963	1		+		3891	15597	1892	1904	4754	4754					0.03581016669522796
EIIDLRNYKYV	11	Unmodified	_EIIDLRNYKYV_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.3901855349541	2	713.390459	1424.76637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.65	1	111.8	111.3	112.3	0.15038								0	0	0	0.63775	1	48388	48388		2.9952	0.26005	1		+		3892	8714	1893	1905	4755	4755					0.07097271348902723
EIIVLKEP	8	Unmodified	_EIIVLKEP_					0	0	0		ENST00000540438.5_1_11:113669964-113691034:-|nuORF;nc|ENSG00000048028|Q96RU2-2|USP28;nc|ENSG00000048028|Q96RU2|USP28;ENSG00000048028|ENST00000696973|USP28	ENST00000540438.5_1_11:113669964-113691034:-|nuORF	ENST00000540438.5_1_11:113669964-113691034:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7122375369072	3	314.195304	939.564084	-0.0047276	-1.4854E-06	2.1557	0.00067731	2.151	0.00067582	314.1959738135421	25.965	0.40789	27.224	27.109	27.517	1.2594					19	12	3	0	0	0	2.3239	1	10894	10894		1.1933	0.23107	1	1014700			3893	683	1894	1906	4756	4756					0.09188412734147278
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2271301150322	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.532	1	74.532	74.032	75.032	0								0	0	0	0.42693	1	31031	31031		0.77653	0	1				3894	1626	1895	1907	4757	4757					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2281371951103	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.345	1	76.345	75.845	76.845	0								0	0	0	0.42693	1	31783	31783		0.86438	0.16671	1				3895	1626	1895	1907	4758	4758					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2280761599541	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.216	1	78.216	77.716	78.716	0								0	0	0	0.42693	1	32561	32561		0.86438	0.16671	1				3896	1626	1895	1907	4759	4759					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2277099490166	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.995	1	78.995	78.495	79.495	0								0	0	0	0.42693	1	32888	32888		0.86438	0.16671	1				3897	1626	1895	1907	4760	4760					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2282287478447	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.423	1	79.423	78.923	79.923	0								0	0	0	0.42693	1	33070	33070		0.77653	0.078866	1				3898	1626	1895	1907	4761	4761					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2288085818291	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.673	1	79.673	79.173	80.173	0								0	0	0	0.42693	1	33174	33174		0.77653	0	1				3899	1626	1895	1907	4762	4762					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2275573611259	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.93	1	80.93	80.43	81.43	0								0	0	0	0.42693	1	33699	33699		0.86438	0.087843	1				3900	1626	1895	1907	4763	4763					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2276183962822	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.163	1	81.163	80.663	81.663	0								0	0	0	0.42693	1	33797	33797		0.77653	0	1				3901	1626	1895	1907	4764	4764					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2285644412041	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.741	1	87.741	87.241	88.241	0								0	0	0	0.42693	1	36673	36673		1.0715	0.10919	1				3902	1626	1895	1907	4765	4765					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2289306521416	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.182	1	88.182	87.682	88.682	0								0	0	0	0.42693	1	36864	36864		0.86438	0.16671	1				3903	1626	1895	1907	4766	4766					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2276183962822	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.198	1	73.523	73.023	74.023	0.32494								0	0	0	0.42693	1	30620	30620		0.77653	0.21336	1				3904	1626	1895	1907	4767	4767					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285034060478	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74	1	74.325	73.825	74.825	0.32494								0	0	0	0.42693	1	30955	30955		0.77653	0.21336	1				3905	1626	1895	1907	4768	4768					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2287780642509	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.16	1	74.484	73.984	74.984	0.32494								0	0	0	0.42693	1	31021	31021		0.86438	0.087843	1				3906	1626	1895	1907	4769	4769					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281066775322	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.54	1	74.864	74.364	75.364	0.32464								0	0	0	0.42693	1	31178	31178		0.86438	0.087843	1				3907	1626	1895	1907	4770	4770					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2286865115166	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.732	1	75.057	74.557	75.557	0.32464								0	0	0	0.42693	1	31258	31258		0.86438	0.3012	1				3908	1626	1895	1907	4771	4771					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278015017509	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.862	1	75.187	74.687	75.687	0.32464								0	0	0	0.42693	1	31313	31313		0.86438	0.3012	1				3909	1626	1895	1907	4772	4772					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284728884697	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.491	1	75.813	75.313	76.313	0.32163								0	0	0	0.42693	1	31571	31571		0.86438	0.3012	1				3910	1626	1895	1907	4773	4773					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2282287478447	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.672	1	75.994	75.494	76.494	0.32163								0	0	0	0.42693	1	31648	31648		1.0715	0.10919	1				3911	1626	1895	1907	4774	4774					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2270080447197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.131	1	76.452	75.952	76.952	0.32163								0	0	0	0.42693	1	31840	31840		0.86438	0.3012	1				3912	1626	1895	1907	4775	4775					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2279846072197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.239	1	76.561	76.061	77.061	0.32163								0	0	0	0.42693	1	31888	31888		0.86438	0.3012	1				3913	1626	1895	1907	4776	4776					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2295715212822	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.976	1	77.292	76.792	77.792	0.31653								0	0	0	0.42693	1	32192	32192		0.86438	0.3012	1				3914	1626	1895	1907	4777	4777					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2276794314384	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.111	1	77.428	76.928	77.928	0.31653								0	0	0	0.42693	1	32248	32248		0.86438	0.3012	1				3915	1626	1895	1907	4778	4778					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284118533134	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.606	1	77.923	77.423	78.423	0.31653								0	0	0	0.42693	1	32453	32453		0.86438	0.3012	1				3916	1626	1895	1907	4779	4779					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2290527224541	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.985	1	78.295	77.795	78.795	0.30933								0	0	0	0.42693	1	32609	32609		0.86438	0.23755	1				3917	1626	1895	1907	4780	4780					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284118533134	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.016	1	79.325	78.825	79.825	0.30933								0	0	0	0.42693	1	33039	33039		0.96228	0.26461	1				3918	1626	1895	1907	4781	4781					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284728884697	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.142	1	79.443	78.943	79.943	0.30047								0	0	0	0.42693	1	33092	33092		0.86438	0.087843	1				3919	1626	1895	1907	4782	4782					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2286559939384	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.608	1	79.909	79.409	80.409	0.30047								0	0	0	0.42693	1	33283	33283		1.0715	0.29493	1				3920	1626	1895	1907	4783	4783					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285644412041	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.738	1	80.038	79.538	80.538	0.30047								0	0	0	0.42693	1	33336	33336		0.86438	0.087843	1				3921	1626	1895	1907	4784	4784					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285339236259	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.802	1	81.093	80.593	81.593	0.29056								0	0	0	0.42693	1	33779	33779		0.86438	0.087843	1				3922	1626	1895	1907	4785	4785					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278015017509	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.409	1	81.7	81.2	82.2	0.29056								0	0	0	0.42693	1	34037	34037		0.86438	0.087843	1				3923	1626	1895	1907	4786	4786					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2284118533134	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.195	1	76.501	76.001	77.001	1.3063								0	0	0	0.42693	1	31560	31560		1.0715	0	1				3924	1626	1895	1907	4787	4787					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2296020388603	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.614	1	89.671	89.171	90.171	1.0562								0	0	0	0.42693	1	37358	37358		1.0715	0.3738	1				3925	1626	1895	1907	4788	4788					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2293884158134	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.13	1	90.15	89.65	90.65	1.0199								0	0	0	0.42693	1	37566	37566		1.0715	0.10919	1				3926	1626	1895	1907	4789	4789					0.09851614382841944
EIKEAHKRK	9	Unmodified	_EIKEAHKRK_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2281066775322	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.248	1	80.983	80.483	81.483	1.735								0	0	0	0.42693	1	33237	33237		1.0715	0.10919	1				3927	1626	1895	1907	4790	4790					0.09851614382841944
EIKITPWFKII	11	Unmodified	_EIKITPWFKII_					0	0	0		ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1	ENSG00000067064|ENST00000381344|IDI1	ENSG00000067064|ENST00000381344|IDI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4226562380791	2	694.421031	1386.82751	2.5051	0.0017396	0.56303	0.00039098	3.0682	0.0021306	694.4215105236693	85.212	1.1922	85.464	84.814	86.006	0.25227					78	37	3	0	0	0	1.0366	1	35598	35598		1.1933	0	1	3998800			3928	817	1896	1908	4791	4791					0.14956828118988597
EIKKWFSDTRY	11	Unmodified	_EIKKWFSDTRY_					0	0	0		ENSG00000165156|ENST00000395571|ZHX1	ENSG00000165156|ENST00000395571|ZHX1	ENSG00000165156|ENST00000395571|ZHX1	MSMS	GG20161007_CRH_Patient100_W632_01	3	736.7583495974541	2	736.880259	1471.74596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.779	1	98.007	97.507	98.507	0.22776								0	0	0	0.63775	1	41151	41151		5.2969	0	1				3929	3817	1897	1909	4792	4792					0.028961006890995122
EIKKWLELLQA	11	Unmodified	_EIKKWLELLQA_					0	0	0			REV__nc|ENSG00000071242|Q15349-3|RPS6KA2	REV__nc|ENSG00000071242|Q15349-3|RPS6KA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9100219607353	2	685.905745	1369.79694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.584	1	85.743	85.243	86.243	1.159								0	0	0	0.63775	1	35492	35492		2.086	0.75648	1		+		3930	14391	1898	1910	4793	4793					0.12683049733959706
EIKKYLIKV	9	Unmodified	_EIKKYLIKV_					0	0	0			REV__nc|ENSG00000137100|O75935-3|DCTN3	REV__nc|ENSG00000137100|O75935-3|DCTN3	MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3671142458916	2	567.368267	1132.72198	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.84	1	99.038	98.538	99.538	0.19767								0	0	0	0.42693	1	41613	41613		1.8442	0	1		+		3931	10012	1899	1911	4794	4794					0.16092911993359849
EIKRMRKRKSL	11	Unmodified	_EIKRMRKRKSL_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;ENST00000533625.5_1_14:38165939-38343677:+|nuORF	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.3011352419853	3	482.301283	1443.88202	1.5838	0.00076387	0.40104	0.00019342	1.9848	0.00095729	482.3014239957319	97.674	0.18345	97.674	97.569	97.752	0					18	5	5	0	0	0	1.0366	1	40827	40827		0.40827	0	1	58101000			3932	2896	1900	1912	4795	4795					0.1778351671875953
EIKRMRKRKSL	11	Unmodified	_EIKRMRKRKSL_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;ENST00000533625.5_1_14:38165939-38343677:+|nuORF	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	723.4490234255791	2	722.948287	1443.88202	1.5892	0.0011489	1.6313	0.0011793	3.2204	0.0023282	722.9501143877827	97.674	0.12174	97.674	97.599	97.721	0					9	3	3	0	0	0	1.0366	1	40836	40836		1.1933	0.88631	1	8053900			3933	2896	1900	1912	4796	4796					0.1778351671875953
EIKRQRIEKL	10	Unmodified	_EIKRQRIEKL_					0	0	0		ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.2751647830009	3	438.273499	1311.79867	3.3579	0.0014717	0.88816	0.00038926	4.2461	0.001861	438.27373826432637	95.151	0.45604	95.553	95.284	95.74	0.40208					57	18	4	0	0	0	0.88031	1	40033	40033		3.5871	0	1	9883600			3934	3484	1901	1913	4797	4797					0.1552410354256608
EIKRTRKRWIN	11	Unmodified	_EIKRTRKRWIN_					0	0	0			REV__ENST00000534796.5_1_1:32396577-32396640:-|nuORF	REV__ENST00000534796.5_1_1:32396577-32396640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	750.4514648318291	2	750.449508	1498.88446	2.7221	0.0020428	0.14767	0.00011082	2.8698	0.0021536	750.4497753774127	85.184	1.2862	86.781	86.401	87.687	1.5962					186	52	5	0	0	0	1.037	1	36102	36102		1.0715	0.61312	1	134240000	+		3935	13734	1902	1914	4798	4798					0.15497688448067493
EILFRIKVLRF	11	Unmodified	_EILFRIKVLRF_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MSMS	GG20161007_CRH_Patient100_W632_01	3	717.3416625857353	2	717.453197	1432.89184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.922	1	99.119	98.619	99.619	0.19767								0	0	0	0.63775	1	41648	41648		2.9952	0.26005	1		+		3936	8952	1903	1915	4799	4799					0.19271027995773693
EILIWLLLVV	10	Unmodified	_EILIWLLLVV_					0	0	0			REV__ENST00000562945.2_1_16:34428410-34428635:-|nuORF	REV__ENST00000562945.2_1_16:34428410-34428635:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	404.5830871462822	3	404.265171	1209.77368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.831	1	91.831	91.331	92.331	0								0	0	0	0.66222	1	38375	38375		0.69767	0.07084	1		+		3937	13908	1904	1916	4800	4800					0.17718655687258433
EILKLFPQ	8	Unmodified	_EILKLFPQ_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ABCA6|p.A1534V|1|0.9|ENSG00000154262|chr17:69082888-69082888|G/A|missense_variant;ENST00000451020.6_1_4:419554-419923:-|nuORF;ENST00000518929.5_1_17:67144970-67149609:-|nuORF;ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10	ENSG00000154262|ENST00000284425|ABCA6;ENST00000519732.5_1_17:67144970-67171813:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.7450439333916	2	494.29731	986.580068	2.714	0.0013415	-2.4672	-0.0012195	0.24688	0.00012203	494.2955763657198	72.726	0.37945	74.536	74.292	74.671	1.8101					16	11	2	0	0	0	2.3239	1	30472	30472		12.532	0	1	862670			3938	3380;3381	1905	1917	4801	4801					0.08624118971044936
EILKWLREILI	11	Unmodified	_EILKWLREILI_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;ENST00000495910.6_1_17:29490228-29576996:+|nuORF	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4496337771416	2	713.445037	1424.87552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.07	1	117.23	116.73	117.73	0.15606								0	0	0	0.63775	1	50577	50577		1.3295	0	1				3939	4961	1906	1918	4802	4802					0.18007902039039436
EILKWLREILI	11	Unmodified	_EILKWLREILI_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;ENST00000495910.6_1_17:29490228-29576996:+|nuORF	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4457275271416	2	713.445037	1424.87552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.42	1	117.57	117.07	118.07	0.15606								0	0	0	0.63775	1	50716	50716		1.3295	0	1				3940	4961	1906	1918	4803	4803					0.18007902039039436
EILKWLREILI	11	Unmodified	_EILKWLREILI_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;ENST00000495910.6_1_17:29490228-29576996:+|nuORF	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4499389529228	2	713.445037	1424.87552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.78	1	117.94	117.44	118.44	0.15606								0	0	0	0.63775	1	50864	50864		1.3295	0	1				3941	4961	1906	1918	4804	4804					0.18007902039039436
EILNKAKFL	9	Unmodified	_EILNKAKFL_					0	0	0			REV__nc|ENSG00000042813|Q9BS86-2|ZPBP	REV__nc|ENSG00000042813|Q9BS86-2|ZPBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3273803591728	2	538.329142	1074.64373	2.6684	0.0014365	-3.3166	-0.0017854	-0.64822	-0.00034895	538.3262751713155	85.3	0.47445	86.459	86.21	86.685	1.159					50	17	5	0	0	0	0.75101	1	35874	35874		8.5933	3.8373	1	53715000	+		3942	8600	1907	1919	4805	4805					0.10939479408125408
EILRRQIRLLQ	11	Unmodified	_EILRRQIRLLQ_					0	0	0		ENSG00000014164|ENST00000262577|ZC3H3	ENSG00000014164|ENST00000262577|ZC3H3	ENSG00000014164|ENST00000262577|ZC3H3	MSMS	GG20161007_CRH_Patient100_W632_01	3	719.4544555544853	2	719.454259	1436.89397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.62	1	102.79	102.29	103.29	0.16445								0	0	0	0.63775	1	43215	43215		2.4985	1.169	1				3943	593	1908	1920	4806	4806					0.19299456733597253
EILSHCMQL	9	Unmodified	_EILSHCMQL_					0	0	0			REV__ENST00000523377.1_1_6:90345692-90345764:-|nuORF	REV__ENST00000523377.1_1_6:90345692-90345764:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.8249999880791	2	537.259545	1072.50454	3.1388	0.0016864	2.2132	0.0011891	5.3521	0.0028755	537.2616636152328	72.571	0.27172	73.9	73.732	74.004	1.3297					14	8	3	0	0	0	0.1006	1	30413	30413		15.847	4.2069	1	1030300	+		3944	13641	1909	1921	4807	4807					-0.028815495432127136
EILSHCMQL	9	Unmodified	_EILSHCMQL_					0	0	0			REV__ENST00000523377.1_1_6:90345692-90345764:-|nuORF	REV__ENST00000523377.1_1_6:90345692-90345764:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.259545	1072.50454	2.875	0.0015446	1.8303	0.00098336	4.7053	0.002528	537.2600094965788	72.248	0.27582	74.058	73.861	74.137	1.8101	0.078994	-0.0001668	NaN	21.747	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1154000	+		3945	13641	1909	1921							-0.028815495432127136
EINDIRIIGAI	11	Unmodified	_EINDIRIIGAI_					0	0	0		nc|ENSG00000064651|P55011-3|SLC12A2;ENSG00000064651|ENST00000262461|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.8602172732353	2	613.858795	1225.70304	1.8947	0.0011631	-0.52276	-0.0003209	1.3719	0.00084217	613.8588286198197	68.375	0.47206	70.245	70.042	70.514	1.87					42	14	4	0	0	0	0.03983	1	28678	28678		70.332	4.8583	1	6599700			3946	776	1910	1922	4808	4808					0.09921330631664205
EINIRCQF	8	Unmodified	_EINIRCQF_					0	0	0			REV__nc|ENSG00000054654|Q8WXH0|SYNE2	REV__nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	511.2645141482353	2	511.758027	1021.5015	2.1887	0.0011201	-4.0893	-0.0020927	-1.9006	-0.00097266	511.7569166926323	65.264	0.80124	67.172	66.815	67.616	1.9085					66	25	4	0	0	0	2.3239	1	27339	27339		12.532	5.8084	1	8211400	+		3947	8632	1911	1923	4809	4809					-0.00839056605695987
EINTYNLLI	9	Unmodified	_EINTYNLLI_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8019897341728	2	546.800414	1091.58628	2.3606	0.0012908	1.749	0.00095633	4.1096	0.0022471	546.8011379027431	78.164	0.45029	79.445	79.198	79.649	1.2809					34	14	3	0	0	0	0.51189	1	32809	32809		14.838	0	1	3626000	+		3948	10368	1912	1924	4810	4810					0.04414592411922058
EINTYNLLI	9	Unmodified	_EINTYNLLI_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8015624880791	2	546.800414	1091.58628	1.3376	0.0007314	0.78187	0.00042752	2.1195	0.0011589	546.8014508095866	77.658	0.42232	79.41	79.231	79.654	1.7514					27	13	3	0	0	0	0.39927	1	32573	32573		20.454	0	1	3889200	+		3949	10368	1912	1924	4811	4811					0.04414592411922058
EINTYNLLI	9	Unmodified	_EINTYNLLI_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	546.800414	1091.58628	2.3606	0.0012908	1.749	0.00095633	4.1096	0.0022471	546.8011379027431	78.164	0.45029	79.445	79.198	79.649	1.2809	0.017429	0.00044323	NaN	20.454	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3626000	+		3950	10368	1912	1924							0.04414592411922058
EINTYNLLI	9	Unmodified	_EINTYNLLI_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	546.800414	1091.58628	1.3376	0.0007314	0.78187	0.00042752	2.1195	0.0011589	546.8014508095866	77.658	0.42232	79.41	79.231	79.654	1.7514	-0.017429	-0.00061439	NaN	20.454	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3889200	+		3951	10368	1912	1924							0.04414592411922058
EIPDQRLL	8	Unmodified	_EIPDQRLL_					0	0	0			REV__ENST00000432857.2_1_3:9792686-9793638:+|nuORF	REV__ENST00000432857.2_1_3:9792686-9793638:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2829467654228	2	492.279649	982.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.446	1	91.812	91.312	92.312	1.366								0	0	0	1.0178	1	38096	38096		14.582	0	1		+		3952	9397	1913	1925	4812	4812					0.05277456443241135
EIPQRSAASL	10	Unmodified	_EIPQRSAASL_					0	0	0		ENST00000372189.7_1_9:134473602-134497247:-|nuORF;ENST00000414781.1_1_9:134473602-134479439:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1631347537041	2	536.293288	1070.57202	1.7925	0.00096132	3.063	0.0016427	4.8556	0.002604	536.2945776237403	49.933	0.37498	50.263	50.109	50.484	0.33019					21	11	3	0	0	0	0.12461	1	20986	20986		14.838	3.198	1	1331600			3953	6137	1914	1926	4813	4813					0.039559399836207376
EIPQRSAASL	10	Unmodified	_EIPQRSAASL_					0	0	0		ENST00000372189.7_1_9:134473602-134497247:-|nuORF;ENST00000414781.1_1_9:134473602-134479439:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	ENST00000372189.7_1_9:134473602-134497247:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	536.293288	1070.57202	1.9347	0.0010376	2.0578	0.0011036	3.9925	0.0021412	536.2943354616756	50.568	0.3493	50.568	50.373	50.723	0	0.15244	-0.00068995	NaN	14.838	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1431900			3954	6137	1914	1926							0.039559399836207376
EIQHYLRDDK	10	Unmodified	_EIQHYLRDDK_					0	0	0		tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	440.1844970583916	3	439.557964	1315.65206	0.6589	0.00028963	0.029142	1.281E-05	0.68804	0.00030244	439.55792374348454	13.101	0.18913	13.201	13.091	13.28	0.09944					9	5	3	0	0	0	0.12527	1	5431	5431		7.9454	2.162	1	918430			3955	16259	1915	1927	4814	4814					0.006863815867973244
EIQKKRKRKRG	11	Unmodified	_EIQKKRKRKRG_					0	0	0		CDC5L|p.S625Pfs*5|1|0.39|ENSG00000096401|chr6:44426704-44426704|T/-|frameshift_variant;ENSG00000096401|ENST00000371477|CDC5L	CDC5L|p.S625Pfs*5|1|0.39|ENSG00000096401|chr6:44426704-44426704|T/-|frameshift_variant	CDC5L|p.S625Pfs*5|1|0.39|ENSG00000096401|chr6:44426704-44426704|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.9595214724541	2	713.957501	1425.90045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.04	1	101.24	100.74	101.74	0.20527								0	0	0	0.63775	1	42483	42483		5.2969	3.9674	1				3956	136	1916	1928	4815	4815					0.20453394684955128
EIQYDERYWT	10	Unmodified	_EIQYDERYWT_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2160827517509	3	468.213975	1401.62009	1.4311	0.00067006	2.6243	0.0012287	4.0554	0.0018988	468.2151506223012	24.428	0.40095	24.428	24.242	24.643	0					26	12	3	0	0	0	0.86677	1	10179	10179		5.0475	1.2016	1	1098000	+		3957	10496;14466	1917	1929	4816	4816					-0.0646503088701138
EIQYDERYWT	10	Unmodified	_EIQYDERYWT_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	468.213975	1401.62009	1.5225	0.00071286	1.4322	0.0006706	2.9547	0.0013835	468.54908342947823	24.297	0.14985	24.539	24.444	24.594	0.24251	0.055425	-0.00086074	NaN	5.0475	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	349440	+		3958	10496;14466	1917	1929							-0.0646503088701138
EIRERRVS	8	Unmodified	_EIRERRVS_					0	0	0		ENST00000548190.1_1_12:53849722-53854210:+|nuORF	ENST00000548190.1_1_12:53849722-53854210:+|nuORF	ENST00000548190.1_1_12:53849722-53854210:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.2557250857353	2	522.799072	1043.58359	1.7805	0.00093084	2.1914	0.0011457	3.9719	0.0020765	522.8003648620576	65.121	0.18799	67.029	66.907	67.095	1.9085					8	5	2	0	0	0	2.3239	1	27320	27320		12.532	3.1841	1	219230			3959	7247	1918	1930	4817	4817					0.06354181797610181
EIRQKLNVKH	10	Unmodified	_EIRQKLNVKH_					0	0	0			REV__tr|A0A553SU48|A0A553SU48_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06240PE=4SV=1	REV__tr|A0A553SU48|A0A553SU48_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5895263552666	3	422.254328	1263.74115	1.0196	0.00043053	0.90629	0.00038268	1.9259	0.00081321	422.2550698892577	93.304	0.8219	93.304	92.984	93.805	0					57	25	3	0	0	0	0.89803	1	38909	38909		0.77653	0	1	1816300	+		3960	15279	1919	1931	4818	4818					0.11983261336990836
EIRQKLNVKH	10	Unmodified	_EIRQKLNVKH_					0	0	0			REV__tr|A0A553SU48|A0A553SU48_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06240PE=4SV=1	REV__tr|A0A553SU48|A0A553SU48_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2552673220634	3	422.254328	1263.74115	2.9156	0.0012311	0.29921	0.00012634	3.2148	0.0013575	422.2548823448793	89.579	0.41666	89.803	89.583	90	0.22359					32	12	3	0	0	0	0.89803	1	37551	37551		0.77653	0	1	896490	+		3961	15279	1919	1931	4819	4819					0.11983261336990836
EIRRPHFRRNF	11	Unmodified	_EIRRPHFRRNF_					0	0	0		tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	764.4279052615166	2	764.423825	1526.8331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.24	1	114.39	113.89	114.89	0.14912								0	0	0	0.63775	1	49433	49433		2.9952	1.6657	1				3962	16415	1920	1932	4820	4820					0.09075364474028902
EIRRYLRDNNP	11	Unmodified	_EIRRYLRDNNP_					0	0	0		tr|A0A553SP78|A0A553SP78_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigGPE=3SV=1	tr|A0A553SP78|A0A553SP78_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigGPE=3SV=1	tr|A0A553SP78|A0A553SP78_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	723.8846313357353	2	723.384031	1444.75351	2.4461	0.0017695	-3.693	-0.0026715	-1.2469	-0.000902	723.3812636121405	83.489	0.27702	83.489	83.35	83.627	0					17	8	3	0	0	0	1.0084	1	34787	34787		3.2813	0.28607	1	874700			3963	16456	1921	1933	4821	4821					0.04892253009393244
EIRSGKHI	8	Unmodified	_EIRSGKHI_					0	0	0		nc|ENSG00000271793|O60506-5|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP	nc|ENSG00000271793|O60506-5|SYNCRIP	nc|ENSG00000271793|O60506-5|SYNCRIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.2731506228447	2	470.272158	938.529764	3.6838	0.0017324	-0.31211	-0.00014678	3.3717	0.0015856	470.27190696363516	73.867	0.37636	75.185	74.998	75.374	1.318					27	11	3	0	0	0	0.88504	1	30986	30986		5.7604	5.7604	1	2144500			3964	2655	1922	1934	4822	4822					0.05804009365908769
EIRSGKHI	8	Unmodified	_EIRSGKHI_					0	0	0		nc|ENSG00000271793|O60506-5|SYNCRIP;nc|ENSG00000271793|O60506-4|SYNCRIP;nc|ENSG00000271793|O60506-3|SYNCRIP;nc|ENSG00000271793|O60506-2|SYNCRIP;ENSG00000135316|ENST00000369622|SYNCRIP	nc|ENSG00000271793|O60506-5|SYNCRIP	nc|ENSG00000271793|O60506-5|SYNCRIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2736083865166	2	470.272158	938.529764	3.0955	0.0014557	-0.0091187	-4.2883E-06	3.0864	0.0014514	470.2720482121295	73.448	0.40317	75.245	75.1	75.503	1.7962					30	12	3	0	0	0	0.88504	1	30813	30813		5.7604	1.0044	1	2460400			3965	2655	1922	1934	4823	4823					0.05804009365908769
EIRSLLIML	9	Unmodified	_EIRSLLIML_					0	0	0			REV__ENSG00000061676|ENST00000361354|NCKAP1	REV__ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3273193240166	2	544.330827	1086.6471	1.928	0.0010495	-2.8026	-0.0015255	-0.87463	-0.00047609	544.3293238884944	67.941	0.79601	69.319	68.695	69.491	1.3778					33	25	2	0	0	0	0.12251	1	28467	28467		41.84	3.8656	1	1939300	+		3966	8653	1923	1935	4824	4824					0.10724406190502123
EISKLYQDMQR	11	Unmodified	_EISKLYQDMQR_					0	0	0		ENSG00000198865|ENST00000361970|CCDC152	ENSG00000198865|ENST00000361970|CCDC152	ENSG00000198865|ENST00000361970|CCDC152	MSMS	GG20161007_CRH_Patient100_W632_02	4	705.9523803591728	2	705.855926	1409.6973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.292	1	99.517	99.017	100.02	0.22545								0	0	0	0.63775	1	41776	41776		5.2969	0.39987	1				3967	5096	1924	1936	4825	4825					0.00883864057664141
EISMNLVPFP	10	Unmodified	_EISMNLVPFP_					0	0	0		ENST00000605457.5_1_6:112392617-112397333:-|nuORF;ENSG00000074935|ENST00000368662|TUBE1	ENST00000605457.5_1_6:112392617-112397333:-|nuORF	ENST00000605457.5_1_6:112392617-112397333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.7971069216728	2	573.796817	1145.57908	1.8891	0.0010839	-1.1779	-0.00067587	0.71117	0.00040807	573.7961635132241	83.837	0.3386	85.475	85.284	85.623	1.6379					18	10	2	0	0	0	0.52861	1	35152	35152		26.268	3.5319	1	1781500			3968	921	1925	1937	4826	4826					0.012115365398358335
EISNHKFF	8	Unmodified	_EISNHKFF_					0	0	0			REV__tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	REV__tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.7613708376884	2	511.258717	1020.50288	3.115	0.0015925	-3.6654	-0.001874	-0.55048	-0.00028144	511.2585113768796	75.805	0.70422	77.572	77.391	78.095	1.7672					33	22	3	0	0	0	2.3239	1	31767	31767		8.5933	0	1	663030	+		3969	15860	1926	1938	4827	4827					-0.006550992452844184
EISRKRRIPL	10	Unmodified	_EISRKRRIPL_					0	0	0			REV__ENSG00000197461|ENST00000402802|PDGFA	REV__ENSG00000197461|ENST00000402802|PDGFA	MSMS	GG20161007_CRH_Patient100_W632_01	3	634.4008666872978	2	634.401496	1266.78844	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.483	1	70.849	70.349	71.349	1.3657								0	0	0	0.66155	1	29166	29166		1.8442	0.19162	1		+		3970	11676	1927	1939	4828	4828					0.16571540607992574
EITALAPSTMK	11	Unmodified	_EITALAPSTMK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3142578005791	2	581.312832	1160.61111	0.65966	0.00038347	1.5102	0.00087787	2.1698	0.0012613	581.3141183062667	30.884	0.34683	32.167	31.965	32.312	1.2825					31	10	4	0	0	0	0.032963	2	12967	12921;12967		77.049	43.604	1	5313100			3971	937	1928	1940	4829;4830	4830					0.03722904222968282
EITALAPSTMK	11	Unmodified	_EITALAPSTMK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3143798708916	2	581.312832	1160.61111	0.77418	0.00045004	0.94307	0.00054822	1.7173	0.00099826	581.3137410594558	30.385	0.34188	32.2	31.984	32.325	1.8151					31	10	4	0	0	0	0.026368	2	12749	12702;12749		92.201	54.025	1	4084400			3972	937	1928	1940	4831;4832	4832					0.03722904222968282
EITALAPSTMK	11	Oxidation (M)	_EITALAPSTM(Oxidation (M))K_		EITALAPSTM(1)K		EITALAPSTM(59)K	0	0	1		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3101684451103	2	589.310289	1176.60602	0.49959	0.00029442	0.92824	0.00054702	1.4278	0.00084144	589.3106870782301	21.887	0.20843	23.503	23.401	23.61	1.6158					12	6	2	0	0	0	0.085421	1	9126	9126		59.052	25.608	1	850140			3973	937	1928	1941	4833	4833		16			0.024786003603367135
EITIKARYF	9	Unmodified	_EITIKARYF_					0	0	0		ENSG00000106804|ENST00000223642|C5;C5|p.A1171Vfs*12|1|0.06|ENSG00000106804|chr9:120980231-120980232|-/GCACTCCAGCCTGGGTGACAGAGCGAGAACC|frameshift_variant;C5|p.L1618Nfs*4|1|0.36|ENSG00000106804|chr9:120953778-120953779|AA/-|frameshift_variant	ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8855773806572	3	380.885241	1139.63389	0.27359	0.00010421	1.8291	0.00069667	2.1027	0.00080087	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.77876	1	21314	21314		4.1895	0.60244	1	18085000			3974	1586	1929	1942	4834	4834					0.06966291402750358
EITIKARYF	9	Unmodified	_EITIKARYF_					0	0	0		ENSG00000106804|ENST00000223642|C5;C5|p.A1171Vfs*12|1|0.06|ENSG00000106804|chr9:120980231-120980232|-/GCACTCCAGCCTGGGTGACAGAGCGAGAACC|frameshift_variant;C5|p.L1618Nfs*4|1|0.36|ENSG00000106804|chr9:120953778-120953779|AA/-|frameshift_variant	ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8851806521416	3	380.885241	1139.63389	0.9506	0.00036207	0.95798	0.00036488	1.9086	0.00072695	380.8856156694533	50.441	0.91043	52.416	51.786	52.697	1.9753					90	29	4	0	0	0	0.76103	1	21096	21096		4.897	2.6142	1	14245000			3975	1586	1929	1942	4835	4835					0.06966291402750358
EITRIKREEIK	11	Unmodified	_EITRIKREEIK_					0	0	0		nc|ENSG00000155313|Q9UHP3|USP25;nc|ENSG00000155313|Q9UHP3-1|USP25;ENSG00000155313|ENST00000400183|USP25	nc|ENSG00000155313|Q9UHP3|USP25	nc|ENSG00000155313|Q9UHP3|USP25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.9229614138603	2	707.922458	1413.83036	2.7264	0.0019301	-0.29532	-0.00020906	2.4311	0.001721	707.9222893093821	87.881	0.72318	87.881	87.701	88.424	0					39	23	2	0	0	0	1.0388	1	36790	36790		0.35063	0	1	1142700			3976	3415	1930	1943	4836	4836					0.14000051505854572
EIVKVLPPP	9	Unmodified	_EIVKVLPPP_					0	0	0			REV__ENST00000524307.5_1_8:124089445-124141439:+|nuORF	REV__ENST00000524307.5_1_8:124089445-124141439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.2125732302666	3	331.211066	990.611368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.636	1	58.636	58.136	59.136	0								0	0	0	0.42693	1	24455	24455		0.26902	0	1		+		3977	10518	1931	1944	4837	4837					0.11568692005130288
EIWMNAFENDP	11	Unmodified	_EIWMNAFENDP_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	683.5587646365166	2	683.292627	1364.5707	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.858	1	98.086	97.586	98.586	0.22776								0	0	0	0.63775	1	41184	41184		5.7319	0	1		+		3978	10387	1932	1945	4838	4838					-0.09700062167439683
EIYEKEEQF	9	Unmodified	_EIYEKEEQF_					0	0	0		nc|ENSG00000138778|Q02224-3|CENPE;ENSG00000138778|ENST00000265148|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	nc|ENSG00000138778|Q02224-3|CENPE	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5244628787041	3	405.524038	1213.55028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.945	1	26.63	26.13	27.13	1.6845								0	0	0	0.42693	1	10425	10425		1.0715	0	1				3979	2855	1933	1946	4839	4839					-0.04794909555630511
EIYGHIFTV	9	Unmodified	_EIYGHIFTV_					0	0	0			REV__ENSG00000214435|ENST00000369880|AS3MT	REV__ENSG00000214435|ENST00000369880|AS3MT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2833740115166	2	539.782025	1077.5495	0.7644	0.00041261	-1.8655	-0.001007	-1.1011	-0.00059435	540.2817302538158	58.13	0.3437	59.548	59.44	59.784	1.4181					18	11	2	0	0	0	0.12174	1	24419	24419		42.095	2.1449	1	3699800	+		3980	11854	1934	1947	4840	4840					0.013823405859966442
EIYGHIFTV	9	Unmodified	_EIYGHIFTV_					0	0	0			REV__ENSG00000214435|ENST00000369880|AS3MT	REV__ENSG00000214435|ENST00000369880|AS3MT	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	539.782025	1077.5495	1.9336	0.0010437	1.0224	0.00055187	2.956	0.0015956	539.7830731703397	60.036	0.26852	60.036	59.856	60.124	0	0.26555	0.0017193	NaN	42.095	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211900	+		3981	11854	1934	1947							0.013823405859966442
EIYGHIFTV	9	Unmodified	_EIYGHIFTV_					0	0	0			REV__ENSG00000214435|ENST00000369880|AS3MT	REV__ENSG00000214435|ENST00000369880|AS3MT	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	539.782025	1077.5495	2.4196	0.0013061	-0.054338	-2.9331E-05	2.3653	0.0012767	539.781995431163	59.402	0.26439	59.728	59.604	59.869	0.32553	-0.042703	0.00055694	NaN	42.095	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2326800	+		3982	11854	1934	1947							0.013823405859966442
EKAELIAQL	9	Unmodified	_EKAELIAQL_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1014.585253894329	1	1014.58299	1013.57571	1.7099	0.0017348	-0.32103	-0.00032571	1.3888	0.0014091	1014.5822743265505	66.974	0.34727	66.974	66.798	67.146	0					20	10	3	0	0	0	0.039278	1	27873	27873		76.825	6.4928	1	2057700	+		3983	9803	1935	1948	4841	4841					0.06946609757460465
EKAELIAQL	9	Unmodified	_EKAELIAQL_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7962219119072	2	507.795132	1013.57571	3.1351	0.001592	-0.32489	-0.00016498	2.8102	0.001427	507.79493994738374	65.433	0.46278	66.832	66.601	67.064	1.3989					44	14	4	0	0	0	0.043696	1	27443	27443		72.968	1.0457	1	11898000	+		3984	9803	1935	1948	4842	4842					0.06946609757460465
EKCLKTLFP	9	Unmodified	_EKCLKTLFP_					0	0	0			REV__tr|A0A553SGK8|A0A553SGK8_NIACIIclRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_11040PE=4SV=1	REV__tr|A0A553SGK8|A0A553SGK8_NIACIIclRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2031432986259	3	360.203694	1077.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.51	1	101.58	101.08	102.08	0.067009								0	0	0	0.42693	1	42502	42502		0.96228	0.50394	1		+		3985	14756	1936	1949	4843	4843					0.05356144265033436
EKEDELLF	8	Unmodified	_EKEDELLF_					0	0	0		tr|A0A553SSE1|A0A553SSE1_NIACIPTSsystemmannose-specificEIIABcomponentOS=NialliacirculansOX=1397GN=CEQ21_02855PE=4SV=1	tr|A0A553SSE1|A0A553SSE1_NIACIPTSsystemmannose-specificEIIABcomponentOS=NialliacirculansOX=1397GN=CEQ21_02855PE=4SV=1	tr|A0A553SSE1|A0A553SSE1_NIACIPTSsystemmannose-specificEIIABcomponentOS=NialliacirculansOX=1397GN=CEQ21_02855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1022.500537097454	1	1022.50407	1021.49679	2.4685	0.0025241	-1.4542	-0.0014869	1.0143	0.0010371	1022.5017458615665	68.069	0.46483	69.939	69.704	70.169	1.87					28	14	3	0	0	0	0.7528	1	28621	28621		25.399	3.6527	1	2351500			3986	16607	1937	1950	4844	4844					-0.013096622674765968
EKEDFIEL	8	Unmodified	_EKEDFIEL_					0	0	0		nc|ENSG00000113580|P04150-7|NR3C1;nc|ENSG00000113580|P04150-5|NR3C1;nc|ENSG00000113580|P04150-13|NR3C1;nc|ENSG00000113580|P04150-12|NR3C1;nc|ENSG00000113580|P04150-11|NR3C1;nc|ENSG00000113580|P04150-9|NR3C1;nc|ENSG00000113580|P04150-2|NR3C1;nc|ENSG00000113580|P04150-6|NR3C1;nc|ENSG00000113580|P04150-8|NR3C1;nc|ENSG00000113580|P04150-10|NR3C1;ENSG00000113580|ENST00000394464|NR3C1;nc|ENSG00000113580|P04150-3|NR3C1	nc|ENSG00000113580|P04150-7|NR3C1	nc|ENSG00000113580|P04150-7|NR3C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1022.505541980267	1	1022.50407	1021.49679	1.5613	0.0015965	1.5183	0.0015525	3.0796	0.0031489	1022.5033018167126	68.553	0.45926	69.918	69.662	70.122	1.3657					34	14	4	0	0	0	0.36684	1	28819	28819		61.357	3.8861	1	2442900			3987	1829	1938	1951	4845	4845					-0.013096622674879654
EKEDFIEL	8	Unmodified	_EKEDFIEL_					0	0	0		nc|ENSG00000113580|P04150-7|NR3C1;nc|ENSG00000113580|P04150-5|NR3C1;nc|ENSG00000113580|P04150-13|NR3C1;nc|ENSG00000113580|P04150-12|NR3C1;nc|ENSG00000113580|P04150-11|NR3C1;nc|ENSG00000113580|P04150-9|NR3C1;nc|ENSG00000113580|P04150-2|NR3C1;nc|ENSG00000113580|P04150-6|NR3C1;nc|ENSG00000113580|P04150-8|NR3C1;nc|ENSG00000113580|P04150-10|NR3C1;ENSG00000113580|ENST00000394464|NR3C1;nc|ENSG00000113580|P04150-3|NR3C1	nc|ENSG00000113580|P04150-7|NR3C1	nc|ENSG00000113580|P04150-7|NR3C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1022.505358874798	1	1022.50407	1021.49679	2.4685	0.0025241	-1.4542	-0.0014869	1.0143	0.0010371	1022.5017458615665	68.069	0.46483	69.939	69.704	70.169	1.87					28	14	3	0	0	0	0.36684	1	28568	28568		61.357	6.5839	1	2351500			3988	1829	1938	1951	4846	4846					-0.013096622674879654
EKEIFLKL	8	Unmodified	_EKEIFLKL_					0	0	0		tr|A0A7D6VW67|A0A7D6VW67_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02820PE=4SV=1	tr|A0A7D6VW67|A0A7D6VW67_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02820PE=4SV=1	tr|A0A7D6VW67|A0A7D6VW67_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8053161501884	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.86113	1	28380	28380		15.847	0	1	98417000			3989	16971	1939	1952	4847	4847					0.09772388142516775
EKEWKTGKR	9	Unmodified	_EKEWKTGKR_					0	0	0		ENSG00000130340|ENST00000392185|SNX9	ENSG00000130340|ENST00000392185|SNX9	ENSG00000130340|ENST00000392185|SNX9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1273376345634	3	387.884012	1160.63021	-0.51387	-0.00019932	0.20611	7.9946E-05	-0.30776	-0.00011938	387.88410637458486	15.012	0.28466	15.781	15.58	15.864	0.76937					22	8	4	0	0	0	0.11941	1	6168	6168		1.0715	0	1	6158000			3990	2428	1940	1953	4848	4848					0.05631621628890571
EKGDESADCHL	11	Unmodified	_EKGDESADCHL_					0	0	0		nc|ENSG00000137824|Q96TC7-2|RMDN3;RMDN3|p.D401Pfs*16|1|0.2|ENSG00000137824|chr15:40737651-40737652|-/AAGTCATGAAGGCCAGTGAAACGTGG|frameshift_variant;RMDN3|p.S425Lfs*16|1|0.11|ENSG00000137824|chr15:40737292-40737293|-/GAGACAAAGAACAAATCTAGGGCTCA|frameshift_variant;ENSG00000137824|ENST00000338376|RMDN3	nc|ENSG00000137824|Q96TC7-2|RMDN3	nc|ENSG00000137824|Q96TC7-2|RMDN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.2543823122978	2	602.25096	1202.48737	4.1269	0.0024855	-0.55937	-0.00033688	3.5676	0.0021486	602.2505867698017	94.825	0.44669	95.566	95.325	95.771	0.74124					63	14	6	0	0	0	0.86077	1	39846	39846		12.175	2.1008	1	12260000			3991	2791	1941	1954	4849	4849					-0.10577798615304346
EKICIKIKHL	10	Unmodified	_EKICIKIKHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.9227783083916	3	408.921409	1223.7424	2.8342	0.0011589	0.34366	0.00014053	3.1778	0.0012995	408.921480926424	92.381	0.62007	92.549	92.249	92.869	0.16834					68	19	5	0	0	0	0.89803	2	38647	38647;38700		1.7423	1.7423	1	30571000	+		3992	9117	1942	1955	4850;4851	4850					0.13947759381539981
EKICIKIKHL	10	Unmodified	_EKICIKIKHL_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	612.8799926638603	2	612.878476	1223.7424	2.5583	0.0015679	0.4809	0.00029473	3.0392	0.0018627	612.8786801172273	92.37	0.55605	92.538	92.281	92.837	0.16835					67	17	5	0	0	0	0.89803	1	38684	38684		1.4819	0.15237	1	38741000	+		3993	9117	1942	1955	4852	4852					0.13947759381539981
EKIHLAIIDV	10	Unmodified	_EKIHLAIIDV_					0	0	0		tr|A0A7D6VXM5|A0A7D6VXM5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12620PE=4SV=1	tr|A0A7D6VXM5|A0A7D6VXM5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12620PE=4SV=1	tr|A0A7D6VXM5|A0A7D6VXM5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12620PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8447753787041	2	575.845156	1149.67576	2.1198	0.0012207	-2.8659	-0.0016503	-0.74609	-0.00042963	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.89803	1	31751	31751		1.3295	0.13619	1	3953600			3994	16986	1943	1956	4853	4853					0.10690847091268552
EKIINAKEVLV	11	Unmodified	_EKIINAKEVLV_					0	0	0		tr|A0A7D6VV07|A0A7D6VV07_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03530PE=3SV=1	tr|A0A7D6VV07|A0A7D6VV07_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03530PE=3SV=1	tr|A0A7D6VV07|A0A7D6VV07_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3835937380791	2	628.384645	1254.75474	1.6819	0.0010569	-1.6173	-0.0010163	0.064567	4.0573E-05	628.3839104524359	78.736	0.52486	80.471	80.289	80.814	1.735					41	16	3	0	0	0	1.0249	1	33092	33092		2.2828	0.63015	1	2272800			3995	16959	1944	1957	4854	4854					0.13755074325536043
EKIIPADCQLM	11	Unmodified	_EKIIPADCQLM_					0	0	0			REV__nc|ENSG00000121446|A5PLK6-4|RGSL1	REV__nc|ENSG00000121446|A5PLK6-4|RGSL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	420.2750121951103	3	420.882403	1259.62538	1.0808	0.00045488	3.4069	0.0014339	4.4877	0.0018888	420.883963649349	92.503	0.51559	92.503	92.228	92.744	0					39	16	3	0	0	0	0.14606	1	38604	38604		2.2527	0.51045	1	3428300	+		3996	9588	1945	1958	4855	4855					0.005952333795903542
EKIKLQRILL	10	Unmodified	_EKIKLQRILL_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	627.4200927615166	2	627.418823	1252.82309	1.5332	0.00096193	-0.17599	-0.00011042	1.3572	0.00085151	627.418825555654	107.43	0.18026	107.43	107.33	107.51	0					27	8	5	0	0	0	0.89803	1	46031	46031		1.4819	0	1	81300000	+		3997	8922	1946	1959	4856	4856					0.20679363696081055
EKIKLQRILL	10	Unmodified	_EKIKLQRILL_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	627.4200317263603	2	627.418823	1252.82309	2.653	0.0016646	-0.045261	-2.8398E-05	2.6078	0.0016362	627.41879711606	107.4	0.20724	107.45	107.33	107.54	0.052452					25	9	4	0	0	0	0.86043	1	45912	45912		5.7319	0.43497	1	128140000	+		3998	8922	1946	1959	4857	4857					0.20679363696081055
EKIKLQRILL	10	Unmodified	_EKIKLQRILL_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.4203979372978	2	627.418823	1252.82309	2.8808	0.0018074	-1.8062	-0.0011333	1.0745	0.00067417	627.4177232398912	107.38	0.22867	107.53	107.41	107.64	0.15781					45	11	5	0	0	0	0.86043	1	46141	46141		5.7319	0.43497	1	860870000	+		3999	8922	1946	1959	4858	4858					0.20679363696081055
EKIKLQRILL	10	Unmodified	_EKIKLQRILL_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	627.418823	1252.82309	1.5332	0.00096193	-0.17599	-0.00011042	1.3572	0.00085151	627.418825555654	107.43	0.18026	107.43	107.33	107.51	0	-0.050325	0.00082859	NaN	5.7319	27	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81300000	+		4000	8922	1946	1959							0.20679363696081055
EKIKLQRILL	10	Unmodified	_EKIKLQRILL_					0	0	0			REV__ENSG00000094804|ENST00000209728|CDC6	REV__ENSG00000094804|ENST00000209728|CDC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	627.418823	1252.82309	2.653	0.0016646	-0.045261	-2.8398E-05	2.6078	0.0016362	627.41879711606	107.4	0.20724	107.45	107.33	107.54	0.052452	-0.032651	0.00099264	NaN	5.7319	25	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128140000	+		4001	8922	1946	1959							0.20679363696081055
EKIKQLLKTKL	11	Unmodified	_EKIKQLLKTKL_					0	0	0		tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	671.4466430544853	2	671.445037	1340.87552	2.9425	0.0019758	-1.3177	-0.00088478	1.6248	0.001091	671.4438979663479	105.84	0.15453	106.01	105.92	106.07	0.16679					17	7	3	0	0	0	0.98155	1	45098	45098		4.897	1.6157	1	232080000			4002	16728	1947	1960	4859	4859					0.21871902039015367
EKIKQLLKTKL	11	Unmodified	_EKIKQLLKTKL_					0	0	0		tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	671.445037	1340.87552	1.4692	0.00098648	-0.099728	-6.6962E-05	1.3695	0.00091951	671.4438281425944	105.92	0.095558	105.92	105.88	105.97	0	-0.050794	0.00084665	NaN	4.897	12	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41728000			4003	16728	1947	1960							0.21871902039015367
EKIKQLLKTKL	11	Unmodified	_EKIKQLLKTKL_					0	0	0		tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	671.445037	1340.87552	2.679	0.0017988	0.15534	0.0001043	2.8344	0.0019031	671.4449407306006	105.88	0.12132	105.93	105.88	106	0.05455	-0.040962	0.0011892	NaN	4.897	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62556000			4004	16728	1947	1960							0.21871902039015367
EKIKQLLKTKL	11	Unmodified	_EKIKQLLKTKL_					0	0	0		tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	tr|A0A7D6VNB2|A0A7D6VNB2_9CLOTFapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17085PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	671.445037	1340.87552	2.9181	0.0019593	-0.82948	-0.00055695	2.0886	0.0014024	671.4443373813417	105.87	0.19106	106.03	105.91	106.1	0.15859	0.056469	-0.00013333	NaN	4.897	30	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370160000			4005	16728	1947	1960							0.21871902039015367
EKIMWRYNY	9	Unmodified	_EKIMWRYNY_					0	0	0		ENSG00000218336|ENST00000511685|TENM3	ENSG00000218336|ENST00000511685|TENM3	ENSG00000218336|ENST00000511685|TENM3	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8821288943291	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.61	1	110.77	110.27	111.27	0.16133								0	0	0	0.42693	1	48029	48029		0.26902	0.1097	1				4006	5265	1948	1961	4860	4860					-0.016068539630168743
EKINKKHRK	9	Unmodified	_EKINKKHRK_					0	0	0			REV__nc|ENSG00000083223|Q5VYS8-5|TUT7	REV__nc|ENSG00000083223|Q5VYS8-5|TUT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	590.8675414919853	2	590.867289	1179.72002	2.4636	0.0014556	-1.4014	-0.00082805	1.0622	0.0006276	590.8663908332902	90.455	0.65047	90.455	90.193	90.843	0					74	20	5	0	0	0	0.82654	1	37780	37780		3.9444	3.4196	1	65063000	+		4007	8828	1949	1962	4861	4861					0.13735296028107769
EKIPEKKQRLE	11	Unmodified	_EKIPEKKQRLE_					0	0	0		nc|ENSG00000155966|P51816-7|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-6|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-5|AFF2;ENSG00000155966|ENST00000370460|AFF2	nc|ENSG00000155966|P51816-7|AFF2	nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	699.4110595583916	2	699.409183	1396.80381	2.5356	0.0017734	-1.2811	-0.000896	1.2545	0.00087739	699.4080920657195	87.117	1.2908	87.36	87.195	88.486	0.24387					86	43	3	0	0	0	1.0373	1	36795	36795		0.96228	0	1	3164400			4008	3434	1950	1963	4862	4862					0.12128362614521393
EKIPPIILRYA	11	Unmodified	_EKIPPIILRYA_					0	0	0			REV__nc|ENSG00000150275|Q96QU1-2|PCDH15	REV__nc|ENSG00000150275|Q96QU1-2|PCDH15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2729980349541	3	438.271096	1311.79146	3.1458	0.0013787	2.201	0.00096465	5.3469	0.0023434	438.27197011862785	95.835	0.34222	95.958	95.801	96.144	0.12331					35	11	4	0	0	0	1.0224	1	40130	40130		2.4348	0.69251	1	54323000	+		4009	10380	1951	1964	4863	4863					0.1480337094214974
EKIQKLKIAKV	11	Unmodified	_EKIQKLKIAKV_					0	0	0		CON__P00766	CON__P00766	CON__P00766	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	649.4327270388603	2	649.43193	1296.84931	1.5012	0.00097491	0.22867	0.00014851	1.7298	0.0011234	649.4320615842363	107.38	0.18356	107.38	107.29	107.47	0					24	8	4	0	0	0	1.0214	1	46008	46008		2.4985	1.0166	1	78829000		+	4010	333	1952	1965	4864	4864					0.21275632867536842
EKIQRRGYK	9	Unmodified	_EKIQRRGYK_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3451415896416	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.84195	4	31974	31925;31974;32053;32224		1.6526	0.17072	1	9065200			4011	7631	1953	1966	4865;4866;4867;4868	4866					0.09147016757128767
EKIQRRGYK	9	Unmodified	_EKIQRRGYK_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|428|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3442870974541	2	589.343646	1176.67274	1.9498	0.0011491	-0.65915	-0.00038846	1.2907	0.00076065	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	0.84195	3	32087	32087;32137;32244		1.6526	0.17072	1	8239500			4012	7631	1953	1966	4869;4870;4871	4869					0.09147016757128767
EKIRQLKKKET	11	Unmodified	_EKIRQLKKKET_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.6254150271416	3	467.624309	1399.8511	1.8603	0.00086993	-0.46435	-0.00021714	1.396	0.00065279	467.62407823908427	97.271	0.24709	97.271	97.136	97.383	0					26	7	6	0	0	0	1.0365	1	40648	40648		1.2148	0	1	54606000			4013	1167	1954	1967	4872	4872					0.16716641885500394
EKIRQLKKKET	11	Unmodified	_EKIRQLKKKET_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.6248657107353	3	467.624309	1399.8511	3.4289	0.0016034	-1.6747	-0.00078314	1.7542	0.00082031	467.623402059131	97.228	0.21989	97.319	97.18	97.399	0.090881					19	6	4	0	0	0	1.0365	1	40664	40664		1.2148	0	1	50779000			4014	1167	1954	1967	4873	4873					0.16716641885500394
EKIRQLKKKET	11	Unmodified	_EKIRQLKKKET_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.6259948611259	3	467.624309	1399.8511	3.9628	0.0018531	-1.554	-0.00072669	2.4088	0.0011264	467.62359508874164	97.028	0.14828	97.312	97.242	97.39	0.28442					16	5	4	0	0	0	1.0365	1	40818	40818		1.2148	0.51716	1	15945000			4015	1167	1954	1967	4874	4874					0.16716641885500394
EKIRQLKKKET	11	Unmodified	_EKIRQLKKKET_					0	0	0		nc|ENSG00000092853|Q9HAW4-2|CLSPN;nc|ENSG00000092853|Q9HAW4-3|CLSPN;ENSG00000092853|ENST00000318121|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	nc|ENSG00000092853|Q9HAW4-2|CLSPN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	467.624309	1399.8511	3.5827	0.0016754	-1.4514	-0.00067871	2.1313	0.00099666	467.6235704354732	96.921	0.18836	97.227	97.101	97.289	0.3062	-0.055354	-0.00023132	NaN	1.2148	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16193000			4016	1167	1954	1967							0.16716641885500394
EKKDKLAAIHL	11	Unmodified	_EKKDKLAAIHL_					0	0	0		nc|ENSG00000151849|Q9HC77-2|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5898315310478	3	422.590717	1264.75032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.108	1	36.41	35.91	36.91	0.30197								0	0	0	0.63775	1	15183	15183		2.6312	0.54523	1				4017	7896	1955	1968	4875	4875					0.12853609902640528
EKKQWPLV	8	Unmodified	_EKKQWPLV_					0	0	0		ENST00000284425.6_1_17:67087362-67092889:-|nuORF	ENST00000284425.6_1_17:67087362-67092889:-|nuORF	ENST00000284425.6_1_17:67087362-67092889:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.3013793826103	2	514.300384	1026.58622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.59	1	98.67	98.17	99.17	0.080376								0	0	0	1.0178	1	41264	41264		2.3027	0	1				4018	5711	1956	1969	4876	4876					0.07398637202550162
EKLAIMGL	8	Unmodified	_EKLAIMGL_					0	0	0			REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	437.7590820193291	2	437.756964	873.499375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.956	1	78.266	77.766	78.766	0.30933								0	0	0	1.0178	1	32597	32597		36.044	1.8569	1		+		4019	15130	1957	1970	4877	4877					0.057565146565139
EKLDLLAIM	9	Unmodified	_EKLDLLAIM_					0	0	0		tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3030273318291	2	523.301736	1044.58892	1.7919	0.00093771	2.7263	0.0014267	4.5182	0.0023644	523.3033827690094	70.122	2.1807	70.122	69.202	71.383	0					180	69	4	0	0	0	0.83753	1	29299	29299		1.8442	0.19162	1	4159100			4020	17053	1958	1971	4878	4878					0.06840724545190824
EKLDLLAIM	9	Unmodified	_EKLDLLAIM_					0	0	0		tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	tr|A0A7D6ZES2|A0A7D6ZES2_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3053466677666	2	523.301736	1044.58892	2.175	0.0011382	1.4488	0.00075815	3.6238	0.0018963	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.83753	1	28883	28883		1.8442	0.19162	1	5777900			4021	17053	1958	1971	4879	4879					0.06840724545190824
EKLDLPEV	8	Unmodified	_EKLDLPEV_					0	0	0			REV__ENSG00000114656|ENST00000645291|CFAP92	REV__ENSG00000114656|ENST00000645291|CFAP92	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	942.5179931521416	1	942.514239	941.506963	2.9214	0.0027535	-0.37713	-0.00035545	2.5443	0.002398	942.5138286836661	59.381	0.35952	61.35	61.162	61.522	1.969					16	11	2	0	0	0	0.37791	1	24915	24915		58.679	1.2075	1	987890	+		4022	9414	1959	1972	4880	4880					0.033869454577597935
EKLDLPEV	8	Unmodified	_EKLDLPEV_					0	0	0			REV__ENSG00000114656|ENST00000645291|CFAP92	REV__ENSG00000114656|ENST00000645291|CFAP92	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	942.514239	941.506963	2.3074	0.0021748	0.071938	6.7803E-05	2.3794	0.0022426	942.5136922118216	59.863	0.30604	61.283	61.115	61.421	1.4196	-0.033714	0.00017933	NaN	58.679	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1229600	+		4023	9414	1959	1972							0.033869454577597935
EKLDLPEV	8	Unmodified	_EKLDLPEV_					0	0	0			REV__ENSG00000114656|ENST00000645291|CFAP92	REV__ENSG00000114656|ENST00000645291|CFAP92	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	942.514239	941.506963	2.9214	0.0027535	-0.37713	-0.00035545	2.5443	0.002398	942.5138286836661	59.381	0.35952	61.35	61.162	61.522	1.969	0.033714	-0.00024392	NaN	58.679	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	987890	+		4024	9414	1959	1972							0.033869454577597935
EKLEFWREFHN	11	Unmodified	_EKLEFWREFHN_					0	0	0			REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2543823122978	3	512.252764	1533.73646	1.0335	0.00052942	2.1106	0.0010811	3.1441	0.0016106	512.2544506027472	19.4	2.9513	19.4	19.045	21.997	0					231	94	7	0	0	0	0.91757	1	8051	8051		8.7518	0.90574	1	230570000	+		4025	15146	1960	1973	4881	4881					-0.009056675964529859
EKLEFWREFHN	11	Unmodified	_EKLEFWREFHN_					0	0	0			REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.2550536990166	3	512.252764	1533.73646	0.67951	0.00034808	2.9425	0.0015073	3.622	0.0018554	512.2546364848682	18.925	0.85174	19.118	18.893	19.744	0.19342					101	27	7	0	0	0	0.87918	2	7887	7849;7887		11.065	2.3135	1	52963000	+		4026	15146	1960	1973	4882;4883	4883					-0.009056675964529859
EKLEFWREFHN	11	Unmodified	_EKLEFWREFHN_					0	0	0			REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	767.8793212771416	2	767.875508	1533.73646	0.51027	0.00039183	2.9733	0.0022832	3.4836	0.002675	767.8785480061085	18.903	0.30873	19.097	18.985	19.294	0.19342					20	9	4	0	0	0	0.85989	1	7853	7853		15.248	5.0979	1	1571700	+		4027	15146	1960	1973	4884	4884					-0.009056675964529859
EKLEFWREFHN	11	Unmodified	_EKLEFWREFHN_					0	0	0			REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	REV__tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.2548095583916	3	512.252764	1533.73646	0.87021	0.00044577	2.3527	0.0012052	3.2229	0.0016509	512.2541972870031	18.153	0.45941	19.132	18.932	19.391	0.97922					54	15	5	0	0	0	0.87918	2	7572	7525;7572		11.065	4.4418	1	21780000	+		4028	15146	1960	1973	4885;4886	4886					-0.009056675964529859
EKLFRDPQSLP	11	Unmodified	_EKLFRDPQSLP_					0	0	0			REV__nc|ENSG00000214711|A8MX76-2|CAPN14	REV__nc|ENSG00000214711|A8MX76-2|CAPN14	MSMS	GG20161007_CRH_Patient100_W632_02	4	665.3572875857353	2	665.361702	1328.70885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.707	1	82.403	81.903	82.903	1.6959								0	0	0	0.63774	1	33859	33859		8.1555	2.4237	1		+		4029	11857	1961	1974	4887	4887					0.057644291433234685
EKLKKKITHM	10	Unmodified	_EKLKKKITHM_					0	0	0			REV__tr|A0A7D6VSG8|A0A7D6VSG8_9CLOTDNAprimaseOS=ClostridiumintestinaleOX=36845GN=dnaGPE=3SV=1	REV__tr|A0A7D6VSG8|A0A7D6VSG8_9CLOTDNAprimaseOS=ClostridiumintestinaleOX=36845GN=dnaGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3838989138603	2	628.381383	1254.74821	2.0099	0.001263	2.3583	0.0014819	4.3682	0.0027449	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	0.89803	1	32065	32065		1.4819	0.15237	1	2978200	+		4030	15445	1962	1975	4888	4888					0.13102857893181863
EKLKKLSSV	9	Unmodified	_EKLKKLSSV_					0	0	0		tr|A0A553SJD8|A0A553SJD8_NIACIPhageproteinOS=NialliacirculansOX=1397GN=CEQ21_16610PE=4SV=1	tr|A0A553SJD8|A0A553SJD8_NIACIPhageproteinOS=NialliacirculansOX=1397GN=CEQ21_16610PE=4SV=1	tr|A0A553SJD8|A0A553SJD8_NIACIPhageproteinOS=NialliacirculansOX=1397GN=CEQ21_16610PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3278076052666	2	516.326599	1030.63865	2.746	0.0014178	-0.065004	-3.3563E-05	2.681	0.0013842	516.326567907808	85.276	0.31738	85.276	85.1	85.417	0					21	9	3	0	0	0	0.59203	1	35537	35537		11.64	0	1	2165900			4031	16244	1963	1976	4889	4889					0.12455175545505881
EKLLYKKTSML	11	Unmodified	_EKLLYKKTSML_					0	0	0		ENST00000357992.8_1_1:205583594-205583885:-|nuORF	ENST00000357992.8_1_1:205583594-205583885:-|nuORF	ENST00000357992.8_1_1:205583594-205583885:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9345275759697	3	451.931863	1352.77376	3.7795	0.0017081	3.4871	0.0015759	7.2666	0.003284	451.9336660768295	82.334	1.2771	84.005	82.988	84.265	1.67					54	40	2	0	0	0	1.037	1	34405	34405		0.36667	0	1	964270			4032	6002	1964	1977	4890	4890					0.11148287624973818
EKLSDDCYSC	10	Unmodified	_EKLSDDCYSC_					0	0	0		tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1523315310478	3	388.151218	1161.43183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.774	1	34.774	34.274	35.274	0								0	0	0	0.66256	1	14575	14575		0.12286	0.12286	1				4033	17318	1965	1978	4891	4891					-0.14243348127274658
EKLSDDCYSC	10	Unmodified	_EKLSDDCYSC_					0	0	0		tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1524536013603	3	388.151218	1161.43183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.191	1	37.496	36.996	37.996	0.30497								0	0	0	0.66256	1	15641	15641		0.12286	0.12286	1				4034	17318	1965	1978	4892	4892					-0.14243348127274658
EKLSDDCYSC	10	Unmodified	_EKLSDDCYSC_					0	0	0		tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1526977419853	3	388.151218	1161.43183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.887	1	38.192	37.692	38.692	0.30497								0	0	0	0.66256	1	15936	15936		0.12286	0.12286	1				4035	17318	1965	1978	4893	4893					-0.14243348127274658
EKLSDDCYSC	10	Unmodified	_EKLSDDCYSC_					0	0	0		tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1538879275322	3	388.151218	1161.43183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.032	1	92.013	91.513	92.513	0.98157								0	0	0	0.66256	1	38343	38343		0.12286	0.12286	1				4036	17318	1965	1978	4894	4894					-0.14243348127274658
EKLSDDCYSC	10	Unmodified	_EKLSDDCYSC_					0	0	0		tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	tr|A0A7D7AC71|A0A7D7AC71_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1525756716728	3	388.151218	1161.43183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.788	1	45.732	45.232	46.232	1.9438								0	0	0	0.66256	1	18360	18360		0.12286	0	1				4037	17318	1965	1978	4895	4895					-0.14243348127274658
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4098998904228	2	672.409518	1342.80448	2.2311	0.0015002	-1.6402	-0.0011029	0.59088	0.00039731	672.4084396282121	81.377	1.4672	81.377	80.478	81.946	0					66	47	2	0	0	0	1.0391	1	33788	33788		0.26902	0	1	2220000	+		4038	9868	1966	1979	4896	4896					0.146792020542307
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4117309451103	2	672.409518	1342.80448	2.5354	0.0017048	-0.91797	-0.00061725	1.6174	0.0010876	672.4088403979092	83.537	2.3909	83.537	82.677	85.068	0					147	76	2	0	0	0	1.0372	1	34886	34886		0.96228	0	1	4004900	+		4039	9868	1966	1979	4897	4897					0.146792020542307
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4109374880791	2	672.409518	1342.80448	1.7784	0.0011958	-0.6683	-0.00044937	1.1101	0.00074641	672.4091976123192	79.973	0.62921	80.274	80.004	80.633	0.30047					36	19	2	0	0	0	1.0391	1	33438	33438		0.26902	0	1	1143600	+		4040	9868	1966	1979	4898	4898					0.146792020542307
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4106323122978	2	672.409518	1342.80448	1.9383	0.0013033	-1.006	-0.00067642	0.93236	0.00062693	672.408867948159	81.206	1.355	81.497	80.561	81.916	0.29056					107	43	3	0	0	0	1.0391	1	33704	33704		0.26902	0	1	2380900	+		4041	9868	1966	1979	4899	4899					0.146792020542307
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4116699099541	2	672.409518	1342.80448	2.3022	0.001548	-0.29196	-0.00019632	2.0103	0.0013517	672.4092482135173	83.339	1.8454	83.609	83.337	85.183	0.27029					130	58	4	0	0	0	1.0391	1	35131	35131		0.26902	0	1	4562300	+		4042	9868	1966	1979	4900	4900					0.146792020542307
EKLSKSRINRL	11	Unmodified	_EKLSKSRINRL_					0	0	0			REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	REV__nc|ENSG00000133030|Q6WCQ1-3|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4111205935478	2	672.409518	1342.80448	3.2649	0.0021953	-0.18861	-0.00012683	3.0762	0.0020685	672.4087617945283	82.576	1.3123	83.789	83.006	84.319	1.2125					60	41	3	0	0	0	1.0391	1	34495	34495		0.26902	0	1	3323200	+		4043	9868	1966	1979	4901	4901					0.146792020542307
EKLVTVQGPRR	11	Unmodified	_EKLVTVQGPRR_					0	0	0			REV__nc|ENSG00000009790|Q9Y228-3|TRAF3IP3	REV__nc|ENSG00000009790|Q9Y228-3|TRAF3IP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8839599490166	2	641.883136	1281.75172	2.1395	0.0013733	-0.58879	-0.00037793	1.5508	0.00099541	641.882756461577	80.074	0.93571	80.074	79.856	80.791	0					67	29	3	0	0	0	1.037	1	33450	33450		1.0715	0.46996	1	1307900	+		4044	8524	1967	1980	4902	4902					0.12211243991396259
EKLWQTFWR	9	Unmodified	_EKLWQTFWR_					0	0	0		ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3;nc|ENSG00000080298|P48380-3|RFX3	ENSG00000080298|ENST00000617270|RFX3	ENSG00000080298|ENST00000617270|RFX3	MSMS	GG20161007_CRH_Patient100_A02_02	2	647.3442260622978	2	647.340572	1292.66659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.402	1	66.726	66.226	67.226	0.32449								0	0	0	0.42693	1	27797	27797		1.6526	0	1				4045	1000	1968	1981	4903	4903					0.03196498525585412
EKLYQKRFLFQ	11	Unmodified	_EKLYQKRFLFQ_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	750.9839965701103	2	750.422094	1498.82963	2.7226	0.0020431	2.3366	0.0017535	5.0592	0.0037965	750.9241971429567	105.76	0.052246	105.92	105.88	105.94	0.16679					6	2	3	0	0	0	0.14606	1	45064	45064		2.4985	0	1	3999200	+		4046	15241	1969	1982	4904	4904					0.10017256856781387
EKLYQKRFLFQ	11	Unmodified	_EKLYQKRFLFQ_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	750.422094	1498.82963	2.468	0.001852	4.4464	0.0033366	6.9144	0.0051887	750.4261047773919	105.79	0.09021	105.95	105.89	105.98	0.15859	0.013847	0.00069794	NaN	2.4985	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14702000	+		4047	15241	1969	1982							0.10017256856781387
EKPLIVLIHGF	11	Unmodified	_EKPLIVLIHGF_					0	0	0		tr|A0A553SMP2|A0A553SMP2_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22845PE=4SV=1	tr|A0A553SMP2|A0A553SMP2_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22845PE=4SV=1	tr|A0A553SMP2|A0A553SMP2_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22845PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1963378787041	4	317.195862	1264.75434	1.0711	0.00033975	1.6017	0.00050806	2.6728	0.00084782	317.1961583985246	40.829	1.8044	42.154	41.038	42.843	1.3254					142	57	4	0	0	0	1.0357	1	17157	17157		1.4551	0.24029	1	3140200			4048	16383	1970	1983	4905	4905					0.13255699396358978
EKPWEVQWLK	10	Unmodified	_EKPWEVQWLK_					0	0	0		nc|ENSG00000129221|Q9NZN9-3|AIPL1;nc|ENSG00000129221|Q9NZN9-2|AIPL1;nc|ENSG00000129221|Q9NZN9-4|AIPL1;ENSG00000129221|ENST00000381129|AIPL1	nc|ENSG00000129221|Q9NZN9-3|AIPL1	nc|ENSG00000129221|Q9NZN9-3|AIPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	448.2752868533134	3	448.243317	1341.70812	0.90368	0.00040507	0.0028464	1.2759E-06	0.90652	0.00040634	448.24425095583524	28.207	0.24333	29.982	29.818	30.061	1.7754					12	7	2	0	0	0	0.12549	1	11785	11785		1.7423	0	1	464510			4049	2397	1971	1984	4906	4906					0.05093634494255639
EKRAKRIPFH	10	Unmodified	_EKRAKRIPFH_					0	0	0		tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.3856078982353	2	641.380563	1280.74657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.624	1	84.624	84.124	85.124	0								0	0	0	0.66176	1	35264	35264		1.4819	0.15237	1				4050	17307	1972	1985	4907	4907					0.11742984919442279
EKRAKRIPFH	10	Unmodified	_EKRAKRIPFH_					0	0	0		tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.3854858279228	2	641.380563	1280.74657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.75	1	84.75	84.25	85.25	0								0	0	0	0.66176	1	35316	35316		1.4819	0.15237	1				4051	17307	1972	1985	4908	4908					0.11742984919442279
EKRATLYFPS	10	Unmodified	_EKRATLYFPS_					0	0	0			REV__ENSG00000165185|ENST00000337530|KIAA1958	REV__ENSG00000165185|ENST00000337530|KIAA1958	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	404.2335082888603	3	404.552151	1210.63462	2.0621	0.00083424	1.8169	0.00073503	3.879	0.0015693	404.5527868613331	65.808	0.79084	66.132	65.862	66.653	0.32449					45	24	2	0	0	0	0.12552	1	27530	27530		3.0723	1.33	1	899190	+		4052	10769	1973	1986	4909	4909					0.037730860518195186
EKSFINEW	8	Unmodified	_EKSFINEW_					0	0	0			REV__ENSG00000163833|ENST00000338040|FBXO40	REV__ENSG00000163833|ENST00000338040|FBXO40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.7533447146416	2	526.756007	1051.49746	0.82458	0.00043435	-3.6858	-0.0019415	-2.8612	-0.0015072	526.7541415660236	17.004	0.56348	17.004	16.722	17.285	0					35	17	3	0	0	0	0.83518	1	6983	6983		18.135	1.1927	1	589570	+		4053	10700	1974	1987	4910	4910					-0.026228228277659582
EKSFINEW	8	Unmodified	_EKSFINEW_					0	0	0			REV__ENSG00000163833|ENST00000338040|FBXO40	REV__ENSG00000163833|ENST00000338040|FBXO40	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	526.756007	1051.49746	0.57787	0.0003044	-3.5498	-0.0018699	-2.9719	-0.0015655	526.7541777489671	16.86	0.42183	17.011	16.826	17.248	0.15093	-0.033719	-0.00012962	NaN	18.135	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1098000	+		4054	10700	1974	1987							-0.026228228277659582
EKSFSRTFCL	10	Unmodified	_EKSFSRTFCL_					0	0	0			REV__nc|ENSG00000196814|Q9H7P6-2|MVB12B	REV__nc|ENSG00000196814|Q9H7P6-2|MVB12B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3023559451103	2	609.302798	1216.59104	1.6281	0.000992	-2.0589	-0.0012545	-0.43077	-0.00026247	609.3015234594113	49.953	0.34263	51.93	51.727	52.07	1.9772					30	10	4	0	0	0	0.35292	1	20890	20890		36.127	1.7253	1	4913000	+		4055	11648	1975	1988	4911	4911					-0.008588467169602154
EKSRGSYK	8	Unmodified	_EKSRGSYK_					0	0	0			REV__LRP4|p.N1589S|1|0.39|ENSG00000134569|chr11:46869059-46869059|T/C|missense_variant	REV__LRP4|p.N1589S|1|0.39|ENSG00000134569|chr11:46869059-46869059|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	318.1545593142509	3	318.838291	953.493044	-3.0895	-0.00098504	0.71303	0.00022734	-2.3764	-0.0007577	318.8380389579235	20.959	0.34241	20.959	20.787	21.129	0					28	10	4	0	0	0	2.3239	1	8745	8745		3.5965	0	1	2985100	+		4056	14352	1976	1989	4912	4912					0.014437127493351909
EKSWPCFR	8	Unmodified	_EKSWPCFR_					0	0	0			REV__ENSG00000155530|ENST00000285928|LRGUK	REV__ENSG00000155530|ENST00000285928|LRGUK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.7549316287041	2	526.752744	1051.49094	0.82458	0.00043435	2.508	0.0013211	3.3326	0.0017554	526.7541415660236	17.004	0.56348	17.004	16.722	17.285	0					35	17	3	0	0	0	0.84871	1	7036	7036		16.942	0	1	589570	+		4057	10494	1977	1990	4913	4913					-0.032750392601201384
EKSWPCFR	8	Unmodified	_EKSWPCFR_					0	0	0			REV__ENSG00000155530|ENST00000285928|LRGUK	REV__ENSG00000155530|ENST00000285928|LRGUK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.7538940310478	2	526.752744	1051.49094	0.57788	0.0003044	2.6439	0.0013927	3.2218	0.0016971	526.7541777489671	16.86	0.42183	17.011	16.826	17.248	0.15093					21	13	2	0	0	0	0.87572	1	6988	6988		11.64	0	1	1098000	+		4058	10494	1977	1990	4914	4914					-0.032750392601201384
EKTAWNDLWK	10	Unmodified	_EKTAWNDLWK_					0	0	0			REV__ENST00000296861.2_1_6:47199552-47199924:-|nuORF	REV__ENST00000296861.2_1_6:47199552-47199924:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886596560478	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.289	1	13.388	12.888	13.888	0.09944								0	0	0	0.66082	1	5515	5515		3.0723	0.9883	1		+		4059	12299	1978	1991	4915	4915					0.0072018456346540916
EKTILWPR	8	Unmodified	_EKTILWPR_					0	0	0			REV__ENST00000523632.1_1_6:109321648-109322661:-|nuORF	REV__ENST00000523632.1_1_6:109321648-109322661:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2069274783134	3	348.206315	1041.59712	0.8385	0.00029197	0.81089	0.00028236	1.6494	0.00057433	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.88846	1	13473	13473		3.5965	0	1	7322900	+		4060	8808	1979	1992	4916	4916					0.07798039576823612
EKTLPAAL	8	Unmodified	_EKTLPAAL_					0	0	0		ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.L1514Ffs*17|1|0.21|ENSG00000133812|chr11:9795861-9795862|-/TTGGGGATGTTGCCTGGACCTTGGAA|frameshift_variant;ENSG00000133812|ENST00000256190|SBF2;ENST00000526353.1_1_11:9983413-9985421:-|nuORF	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7518188357353	2	421.752736	841.490919	0.70976	0.00029934	-2.7924	-0.0011777	-2.0826	-0.00087835	421.75135351229454	71.067	0.83904	71.067	70.449	71.288	0					54	26	3	0	0	0	0.89008	1	29650	29650		2.5775	0	1	4428000			4061	2583	1980	1993	4917	4917					0.06383284011508294
EKVESILCEPS	11	Unmodified	_EKVESILCEPS_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	617.3043701052666	2	617.305203	1232.59585	1.9884	0.0012275	-2.4825	-0.0015325	-0.49412	-0.00030502	617.3037971088635	39.743	0.30704	39.743	39.544	39.852	0					20	9	3	0	0	0	0.28398	1	16665	16665		33.445	2.1766	1	1547600	+		4062	11239	1981	1994	4918	4918					-0.011140073648675752
EKVPLILV	8	Unmodified	_EKVPLILV_					0	0	0		ENSG00000123728|ENST00000370874|RAP2C	ENSG00000123728|ENST00000370874|RAP2C	ENSG00000123728|ENST00000370874|RAP2C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2479431033134	3	304.203911	909.589904	-2.4475	-0.00074452	3.2344	0.00098392	0.78694	0.00023939	304.20514684650965	37.041	0.36579	37.041	36.878	37.244	0					30	19	2	0	0	0	2.3239	1	15507	15507		0.45834	0	1	1122900			4063	2199	1982	1995	4919	4919					0.13149306976436037
EKVPLILV	8	Unmodified	_EKVPLILV_					0	0	0		ENSG00000123728|ENST00000370874|RAP2C	ENSG00000123728|ENST00000370874|RAP2C	ENSG00000123728|ENST00000370874|RAP2C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.203911	909.589904	0.7793	0.00023707	2.4815	0.00075488	3.2608	0.00099195	304.20530389222847	36.446	0.22218	36.748	36.632	36.854	0.30196	-0.14693	-0.00050919	NaN	0.45834	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1417800			4064	2199	1982	1995							0.13149306976436037
EKVSVVCG	8	Unmodified	_EKVSVVCG_					0	0	0			REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	820.4262573122978	1	820.423316	819.416039	1.2529	0.0010279	2.7142	0.0022268	3.9671	0.0032547	820.4257187222038	100.37	0.123	100.37	100.29	100.41	0					8	3	3	0	0	0	0.87431	1	42022	42022		12.532	0	1	6017900	+		4065	13320	1983	1996	4920	4920					-0.0008922179134742692
EKVSVVCG	8	Unmodified	_EKVSVVCG_					0	0	0			REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	820.4268066287041	1	820.423316	819.416039	2.7663	0.0022695	3.09	0.0025351	5.8563	0.0048047	820.4259431156805	100.32	0.12411	100.39	100.32	100.44	0.072716					5	3	2	0	0	0	0.87431	1	42008	42008		12.532	0	1	4718400	+		4066	13320	1983	1996	4921	4921					-0.0008922179134742692
EKVSVVCG	8	Unmodified	_EKVSVVCG_					0	0	0			REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	820.423316	819.416039	1.2529	0.0010279	2.7142	0.0022268	3.9671	0.0032547	820.4257187222038	100.37	0.123	100.37	100.29	100.41	0	-0.012139	-0.0001071	NaN	12.532	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6017900	+		4067	13320	1983	1996							-0.0008922179134742692
EKVSVVCG	8	Unmodified	_EKVSVVCG_					0	0	0			REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	REV__ENST00000477538.1_1_3:10184451-10184685:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	820.423316	819.416039	2.7663	0.0022695	3.09	0.0025351	5.8563	0.0048047	820.4259431156805	100.32	0.12411	100.39	100.32	100.44	0.072716	0.012139	0.00020126	NaN	12.532	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4718400	+		4068	13320	1983	1996							-0.0008922179134742692
EKVVEIDEFYK	11	Unmodified	_EKVVEIDEFYK_					0	0	0			REV__nc|ENSG00000154898|Q8IYA2|CCDC144CP	REV__nc|ENSG00000154898|Q8IYA2|CCDC144CP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.2447387576103	3	466.909892	1397.70785	1.6618	0.00077589	1.2525	0.00058479	2.9142	0.0013607	466.91042276875794	30.328	0.7971	30.328	30.131	30.928	0					59	25	3	0	0	0	0.9945	1	12667	12667		4.1166	0	1	2779800	+		4069	14465	1984	1997	4922	4922					0.024901699837755586
EKVVEIDEFYK	11	Unmodified	_EKVVEIDEFYK_					0	0	0			REV__nc|ENSG00000154898|Q8IYA2|CCDC144CP	REV__nc|ENSG00000154898|Q8IYA2|CCDC144CP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	467.2447387576103	3	466.909892	1397.70785	1.6618	0.00077589	1.2525	0.00058479	2.9142	0.0013607	466.91042276875794	30.328	0.7971	30.328	30.131	30.928	0					59	25	3	0	0	0	0.14606	1	12667	12667		4.1166	0	1	2779800	+		4070	14465	1984	1997	4923	4923					0.024901699837755586
ELAALIPLVV	10	Unmodified	_ELAALIPLVV_					0	0	0		ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5592224001884	3	346.558354	1036.65323	1.4919	0.00051704	2.2745	0.00078823	3.7664	0.0013053	346.55916651783355	66.673	0.86222	66.998	66.527	67.389	0.32449					47	19	3	0	0	0	0.89803	1	27847	27847		0.77653	0	1	3690800			4071	3619	1985	1998	4924	4924					0.13637247693668542
ELAALIPLVV	10	Unmodified	_ELAALIPLVV_					0	0	0		ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	ENSG00000162415|ENST00000359600|ZSWIM5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5601989626884	3	346.558354	1036.65323	1.7787	0.00061644	2.1107	0.00073149	3.8895	0.0013479	346.5590669488793	65.157	0.47177	66.556	66.316	66.788	1.3989					39	14	3	0	0	0	0.89803	1	27297	27297		0.77653	0	1	3603700			4072	3619	1985	1998	4925	4925					0.13637247693668542
ELAEKHKRE	9	Unmodified	_ELAEKHKRE_					0	0	0			REV__nc|ENSG00000176771|O14513-3|NCKAP5	REV__nc|ENSG00000176771|O14513-3|NCKAP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3127319216728	2	570.312012	1138.60947	0.65242	0.00037208	0.13913	7.9349E-05	0.79155	0.00045143	570.3122370501967	23.384	0.40503	23.617	23.442	23.847	0.23306					27	12	3	0	0	0	0.61249	1	9798	9798		10.824	1.4765	1	1514000	+		4073	11193	1986	1999	4926	4926					0.045710312492246885
ELAGTRLG	8	Unmodified	_ELAGTRLG_					0	0	0			REV__ENST00000471642.6_1_1:155657897-155658949:+|nuORF	REV__ENST00000471642.6_1_1:155657897-155658949:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.7327453494072	2	408.732335	815.450116	-0.49942	-0.00020413	1.2473	0.00050979	0.74783	0.00030566	408.7327519756319	12.396	0.31025	13.089	12.917	13.227	0.69396					25	9	4	0	0	0	0.27057	1	5127	5127		74.423	10.186	1	8517400	+		4074	13285	1987	2000	4927	4927					0.035009426919032194
ELAHWFYLDFY	11	Unmodified	_ELAHWFYLDFY_					0	0	0		nc|ENSG00000172795|Q8IU60-2|DCP2;ENSG00000172795|ENST00000389063|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	752.3539916872978	2	752.350803	1502.68705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.745	1	97.051	96.551	97.551	0.3062								0	0	0	0.63775	1	40696	40696		5.7319	0.83484	1				4075	4252	1988	2001	4928	4928					-0.04418375605246183
ELALPSIFSL	10	Unmodified	_ELALPSIFSL_					0	0	0		ENSG00000156273|ENST00000286800|BACH1	ENSG00000156273|ENST00000286800|BACH1	ENSG00000156273|ENST00000286800|BACH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3189575076103	2	545.313158	1088.61176	2.2452	0.0012243	0.39829	0.00021719	2.6435	0.0014415	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.85124	1	30218	30218		6.7232	0.51738	1	12778000			4076	3443	1989	2002	4929	4929					0.07100066934322058
ELCLVRAEI	9	Unmodified	_ELCLVRAEI_					0	0	0		AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2922851443291	2	523.289159	1044.56377	3.4532	0.001807	-3.6041	-0.001886	-0.15085	-7.8939E-05	523.2876804271383	74.286	1.013	75.604	75.279	76.292	1.318					114	32	5	0	0	0	0.066815	1	31149	31149		61.357	1.5623	1	53402000			4077	98	1990	2003	4930	4930					0.043266697426361134
ELCLVRAEI	9	Unmodified	_ELCLVRAEI_					0	0	0		AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	AXDND1|p.H343Efs*32|1|0.48|ENSG00000162779|chr1:179395119-179395126|ACATGATG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2891723513603	2	523.289159	1044.56377	2.9498	0.0015436	-2.9592	-0.0015485	-0.0094587	-4.9496E-06	523.2879082324351	73.817	1.0536	75.613	75.317	76.371	1.7962					118	33	5	0	0	0	0.13873	1	30990	30990		39.957	1.9833	1	45703000			4078	98	1990	2003	4931	4931					0.043266697426361134
ELDLIFHV	8	Unmodified	_ELDLIFHV_					0	0	0		ENSG00000177879|ENST00000316788|AP3S1	ENSG00000177879|ENST00000316788|AP3S1	ENSG00000177879|ENST00000316788|AP3S1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2729980349541	2	493.271293	984.528032	2.4606	0.0012137	-3.7875	-0.0018683	-1.3269	-0.00065452	493.269836116375	79.62	0.47711	79.921	79.623	80.1	0.30047					18	14	2	0	0	0	0.87803	1	33312	33312		10.183	0.80027	1	480320			4079	4466	1991	2004	4932	4932					0.03514955557284338
ELDRERQRRM	10	Unmodified	_ELDRERQRRM_					0	0	0		ENSG00000075240|ENST00000406902|GRAMD4	ENSG00000075240|ENST00000406902|GRAMD4	ENSG00000075240|ENST00000406902|GRAMD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	695.1903564333916	2	694.862409	1387.71026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.5	1	113.67	113.17	114.17	0.17579								0	0	0	0.6607	1	49205	49205		3.2813	0.28607	1				4080	927	1992	2005	4933	4933					0.03191739960425366
ELDTFALYL	9	Unmodified	_ELDTFALYL_					0	0	0			REV__ENSG00000066739|ENST00000359933|ATG2B	REV__ENSG00000066739|ENST00000359933|ATG2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7815429568291	2	542.78169	1083.54883	2.0872	0.0011329	-3.0716	-0.0016672	-0.98431	-0.00053427	542.7795209888014	63.656	0.2187	65.063	64.988	65.207	1.4071					12	6	2	0	0	0	0.24063	1	26713	26713		28.487	0	1	1614300	+		4081	8688	1993	2006	4934	4934					0.010395011462833281
ELDTFALYL	9	Unmodified	_ELDTFALYL_					0	0	0			REV__ENSG00000066739|ENST00000359933|ATG2B	REV__ENSG00000066739|ENST00000359933|ATG2B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	542.78169	1083.54883	2.0872	0.0011329	-3.0716	-0.0016672	-0.98431	-0.00053427	542.7795209888014	63.656	0.2187	65.063	64.988	65.207	1.4071	-0.029721	-0.0015365	NaN	28.487	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1614300	+		4082	8688	1993	2006							0.010395011462833281
ELEERRKLYRW	11	Unmodified	_ELEERRKLYRW_					0	0	0		nc|ENSG00000161905|P16050-2|ALOX15;ENSG00000161905|ENST00000293761|ALOX15	nc|ENSG00000161905|P16050-2|ALOX15	nc|ENSG00000161905|P16050-2|ALOX15	MSMS	GG20161007_CRH_Patient100_W632_02	4	789.2621337771416	2	789.430981	1576.84741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.85	1	114	113.5	114.5	0.14912								0	0	0	0.63775	1	49276	49276		1.3295	0	1				4083	3601	1994	2007	4935	4935					0.08205972111659321
ELEFRRRIESK	11	Unmodified	_ELEFRRRIESK_					0	0	0			REV__tr|A0A7D6VQ96|A0A7D6VQ96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01940PE=4SV=1	REV__tr|A0A7D6VQ96|A0A7D6VQ96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01940PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	732.3964111208916	2	731.909882	1461.80521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.77	1	102.94	102.44	103.44	0.16445								0	0	0	0.63775	1	43288	43288		5.7319	2.9967	1		+		4084	15379	1995	2008	4936	4936					0.09277996703281133
ELEKYKNI	8	Unmodified	_ELEKYKNI_					0	0	0		ENST00000560576.1_1_15:52058638-52058794:+|nuORF;ENST00000539962.6_1_15:52058638-52060523:+|nuORF;TMOD2|p.E280Kfs*5|1|0.28|ENSG00000128872|chr15:51798302-51798302|G/-|frameshift_variant;nc|ENSG00000128872|Q9NZR1-2|TMOD2;ENSG00000128872|ENST00000249700|TMOD2	ENST00000560576.1_1_15:52058638-52058794:+|nuORF	ENST00000560576.1_1_15:52058638-52058794:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	518.7874023318291	2	518.787307	1035.56006	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.122	1	79.403	78.903	79.903	1.2809								0	0	0	1.0178	1	32790	32790		36.044	1.8569	1				4085	2386	1996	2009	4937	4937					0.04370323240414109
ELEMVPISQL	10	Unmodified	_ELEMVPISQL_					0	0	0			REV__tr|A0A7D6VTU1|A0A7D6VTU1_9CLOTGTPaseObgOS=ClostridiumintestinaleOX=36845GN=obgEPE=3SV=1	REV__tr|A0A7D6VTU1|A0A7D6VTU1_9CLOTGTPaseObgOS=ClostridiumintestinaleOX=36845GN=obgEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8071777224541	2	579.807382	1157.60021	2.6897	0.0015595	-2.3152	-0.0013424	0.37451	0.00021715	579.8055454091048	75.369	0.48906	77.151	76.945	77.434	1.7817					41	15	4	0	0	0	0.49886	1	31616	31616		27.629	3.6082	1	11882000	+		4086	15500	1997	2010	4938	4938					0.027715018487015186
ELETKLSGF	9	Unmodified	_ELETKLSGF_					0	0	0			REV__tr|A0A7D6VTV0|A0A7D6VTV0_9CLOTIron-sulfurclusterrepairdi-ironproteinOS=ClostridiumintestinaleOX=36845GN=ricPE=4SV=1	REV__tr|A0A7D6VTV0|A0A7D6VTV0_9CLOTIron-sulfurclusterrepairdi-ironproteinOS=ClostridiumintestinaleOX=36845GN=ricPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2722045779228	2	512.27149	1022.52843	2.8155	0.0014423	-0.89335	-0.00045764	1.9222	0.00098467	512.269911621136	64.303	0.18631	66.231	66.139	66.325	1.928					9	5	2	0	0	0	0.66839	1	26997	26997		8.5933	0	1	359370	+		4087	15502	1998	2011	4939	4939					0.018063304864881502
ELEVAVISL	9	Unmodified	_ELEVAVISL_					0	0	0			REV__ENSG00000163755|ENST00000296051|HPS3	REV__ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.5612060427666	1	972.561189	971.553913	2.5863	0.0025153	-0.25592	-0.0002489	2.3304	0.0022664	972.5605767988875	85.304	0.37265	85.557	85.416	85.789	0.25227					15	11	2	0	0	0	0.059546	1	35680	35680		64.236	3.8468	1	1714200	+		4088	10698	1999	2012	4940	4940					0.06699805008918247
ELEVAVISL	9	Unmodified	_ELEVAVISL_					0	0	0			REV__ENSG00000163755|ENST00000296051|HPS3	REV__ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7843200564384	2	486.784233	971.553913	1.9108	0.00093014	1.0439	0.00050815	2.9547	0.0014383	486.7846716594498	84.48	0.4711	85.639	85.402	85.874	1.159					25	14	2	0	0	0	0.059546	1	35401	35401		64.236	3.8468	1	10686000	+		4089	10698	1999	2012	4941	4941					0.06699805008918247
ELFNEKIL	8	Unmodified	_ELFNEKIL_					0	0	0		tr|A0A553SRU6|A0A553SRU6_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01645PE=3SV=1	tr|A0A553SRU6|A0A553SRU6_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01645PE=3SV=1	tr|A0A553SRU6|A0A553SRU6_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01645PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.2856933474541	2	503.2844	1004.55425	2.8903	0.0014546	-1.0763	-0.00054167	1.814	0.00091298	503.2834843760779	73.86	0.28722	74.185	74.04	74.328	0.32494					13	8	2	0	0	0	0.82039	1	30907	30907		19.439	3.6708	1	1173700			4090	16579	2000	2013	4942	4942					0.052152247287722275
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	716.4340087771416	2	716.434481	1430.85441	2.8146	0.0020165	-2.4527	-0.0017572	0.36196	0.00025932	716.4330914385714	87.151	0.48987	87.151	86.769	87.259	0					30	20	3	0	0	0	1.0366	1	36425	36425		1.1933	0.84271	1	4805600	+		4091	12989	2001	2014	4943	4943					0.15621613458506545
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	716.4354125857353	2	716.434481	1430.85441	3.2788	0.0023491	-1.211	-0.00086763	2.0678	0.0014814	716.433359963108	86.01	0.52431	87.557	87.512	88.036	1.547					29	19	2	0	0	0	1.0366	1	36252	36252		1.1933	0	1	6152100	+		4092	12989	2001	2014	4944	4944					0.15621613458506545
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	716.434481	1430.85441	2.8146	0.0020165	-2.4527	-0.0017572	0.36196	0.00025932	716.4330914385714	87.151	0.48987	87.151	86.769	87.259	0	0.089544	1.8425E-05	NaN	1.1933	30	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4805600	+		4093	12989	2001	2014							0.15621613458506545
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	716.434481	1430.85441	2.5374	0.0018179	-2.7401	-0.0019631	-0.2027	-0.00014522	716.9314107182389	86.728	0.14371	86.972	86.841	86.985	0.24387	-0.089544	-0.00039342	NaN	1.1933	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1845800	+		4094	12989	2001	2014							0.15621613458506545
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	716.434481	1430.85441	2.9023	0.0020793	-0.6066	-0.00043459	2.2957	0.0016447	716.4345105551878	86.383	0.28024	87.51	87.439	87.719	1.1265	-0.023519	0.00050765	NaN	1.1933	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3746000	+		4095	12989	2001	2014							0.15621613458506545
ELFRKVRKMKP	11	Unmodified	_ELFRKVRKMKP_					0	0	0			REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	REV__ENST00000424137.2_1_20:34340744-34341539:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	716.434481	1430.85441	3.2788	0.0023491	-1.211	-0.00086763	2.0678	0.0014814	716.433359963108	86.01	0.52431	87.557	87.512	88.036	1.547	0.023519	-0.00035843	NaN	1.1933	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6152100	+		4096	12989	2001	2014							0.15621613458506545
ELFYFIEI	8	Unmodified	_ELFYFIEI_					0	0	0		tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2828857302666	2	537.281326	1072.5481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.434	1	78.201	77.701	78.701	1.7672								0	0	0	1.0178	1	32066	32066		18.135	3.5533	1				4097	16817	2002	2015	4945	4945					0.014727064972248627
ELFYRRLFIFI	11	Unmodified	_ELFYRRLFIFI_					0	0	0			REV__nc|ENSG00000125257|O15439-2|ABCC4	REV__nc|ENSG00000125257|O15439-2|ABCC4	MSMS	GG20161007_CRH_Patient100_W632_02	4	758.9353515505791	2	758.937379	1515.86021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.34	1	114.49	113.99	114.99	0.14912								0	0	0	0.63775	1	49474	49474		1.3295	0	1		+		4098	9662	2003	2016	4946	4946					0.12291035241833015
ELGAALSR	8	Unmodified	_ELGAALSR_					0	0	0		nc|ENSG00000143258|Q9UK80-2|USP21;nc|ENSG00000143258|Q9UK80-3|USP21;ENSG00000143258|ENST00000368002|USP21	nc|ENSG00000143258|Q9UK80-2|USP21	nc|ENSG00000143258|Q9UK80-2|USP21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.7324706912041	2	408.732335	815.450116	0.010483	4.2846E-06	1.1698	0.00047813	1.1803	0.00048241	408.7326876024366	12.199	0.21956	12.987	12.876	13.095	0.78751					16	6	4	0	0	0	0.27057	1	5056	5056		74.423	0	1	13951000			4099	3021	2004	2017	4947	4947					0.035009426919032194
ELGLGFGSHP	10	Unmodified	_ELGLGFGSHP_					0	0	0			REV__tr|A0A553SL91|A0A553SL91_NIACIAsparagine--tRNAligaseOS=NialliacirculansOX=1397GN=asnSPE=3SV=1	REV__tr|A0A553SL91|A0A553SL91_NIACIAsparagine--tRNAligaseOS=NialliacirculansOX=1397GN=asnSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.2562744021416	2	507.256174	1012.49779	1.97	0.0009993	-1.4916	-0.00075661	0.47843	0.00024269	507.25560972348177	79.005	0.38843	79.005	78.787	79.175	0					23	12	3	0	0	0	0.88314	1	32914	32914		3.2813	0.39209	1	2782800	+		4100	14980	2005	2018	4948	4948					-0.007954031079066226
ELHIEVIMRL	10	Unmodified	_ELHIEVIMRL_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MSMS	GG20161007_CRH_Patient100_W632_02	4	418.2428771853447	3	418.240919	1251.70093	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.26	1	104.43	103.93	104.93	0.1731								0	0	0	0.66176	1	44063	44063		0.62683	0.21856	1		+		4101	9529	2006	2019	4949	4949					0.08514578622202862
ELHKEQQELH	10	Unmodified	_ELHKEQQELH_					0	0	0			REV__ENSG00000163207|ENST00000368764|IVL	REV__ENSG00000163207|ENST00000368764|IVL	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880187869072	3	430.886081	1289.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.713	1	38.53	38.03	39.03	1.8176								0	0	0	0.66052	1	15403	15403		3.5871	0	1		+		4102	10676	2007	2020	4950	4950					0.003180950697924345
ELHKMKPVLI	10	Unmodified	_ELHKMKPVLI_					0	0	0			REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	REV__ENST00000502584.5_1_4:77952330-77952654:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3665038943291	2	604.365201	1206.71585	3.394	0.0020512	0.7072	0.00042741	4.1012	0.0024786	604.3654736552463	91.275	0.46095	92.641	92.438	92.899	1.366					39	14	3	0	0	0	0.89803	2	38452	38452;38509		1.6526	0	1	11512000	+		4103	13508	2008	2021	4951;4952	4951					0.12076070490206803
ELHLVKKEM	9	Unmodified	_ELHLVKKEM_					0	0	0		tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2143737673759	3	376.214482	1125.62162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.344	1	30.119	29.619	30.619	1.7754								0	0	0	0.42693	1	11868	11868		4.5289	0	1				4104	16790	2009	2022	4953	4953					0.0638293166805397
ELHLVKKEMKN	11	Unmodified	_ELHLVKKEMKN_					0	0	0		tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	tr|A0A7D6VQD0|A0A7D6VQD0_9CLOTDUF871domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02580PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	684.8846313357353	2	684.887029	1367.75951	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.38	1	102.55	102.05	103.05	0.16832								0	0	0	0.63775	1	43091	43091		5.7319	1.7875	1				4105	16790	2010	2023	4954	4954					0.0903363519666982
ELHYDCVF	8	Unmodified	_ELHYDCVF_					0	0	0			REV__ENST00000583071.1_1_17:73488566-73488914:+|nuORF	REV__ENST00000583071.1_1_17:73488566-73488914:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.7985107302666	2	513.223485	1024.43242	3.253	0.0016695	-1.8712	-0.00096033	1.3818	0.00070916	513.2214376048933	65.248	0.46693	66.647	66.443	66.91	1.3989					27	14	2	0	0	0	2.3239	1	27371	27371		10.183	0.10947	1	1455900	+		4106	11225	2011	2024	4955	4955					-0.0788214062527004
ELIEVKRGLL	10	Unmodified	_ELIEVKRGLL_					0	0	0		ENSG00000165819|ENST00000298717|METTL3;ENST00000396522.6_1_14:21967741-21972178:-|nuORF;ENST00000536201.5_1_14:21969853-21979446:-|nuORF	ENSG00000165819|ENST00000298717|METTL3	ENSG00000165819|ENST00000298717|METTL3	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.0339233279228	2	585.366256	1168.71796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.118	1	99.344	98.844	99.844	0.22545								0	0	0	0.66052	1	41707	41707		3.5965	0	1				4107	3862	2012	2025	4956	4956					0.14034822499684196
ELIFDVGG	8	Unmodified	_ELIFDVGG_					0	0	0			REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	425.7528259158134	2	425.221268	848.427984	1.5696	0.00066742	0.82551	0.00035102	2.3951	0.0010184	425.2213618648852	70.229	0.4803	70.552	70.319	70.799	0.32224					38	15	3	0	0	0	2.3239	1	29343	29343		2.5775	0	1	7096200	+		4108	15749	2013	2026	4957	4957					-0.0022928177651238
ELILPHYQL	9	Unmodified	_ELILPHYQL_					0	0	0			REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3200561404228	2	563.318774	1124.623	3.9783	0.0022411	-1.8681	-0.0010523	2.1103	0.0011888	563.3179556395247	86.909	0.55219	88.001	87.845	88.398	1.0918					34	18	3	0	0	0	0.11643	1	36677	36677		43.858	5.8843	1	3104000	+		4109	10800	2014	2027	4958	4958					0.06566889028476908
ELILPHYQL	9	Unmodified	_ELILPHYQL_					0	0	0			REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3190185427666	2	563.318774	1124.623	4.2748	0.002408	-4.2162	-0.0023751	0.058565	3.2991E-05	563.3156847476641	86.437	0.61844	87.984	87.797	88.415	1.547					32	21	3	0	0	0	0.13873	1	36467	36467		39.957	1.9833	1	2694200	+		4110	10800	2014	2027	4959	4959					0.06566889028476908
ELILPHYQL	9	Unmodified	_ELILPHYQL_					0	0	0			REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	563.318774	1124.623	2.1076	0.0011873	0.21518	0.00012122	2.3228	0.0013085	563.3183263051096	88.165	0.36629	88.165	87.999	88.365	0	0.13695	0.0024294	NaN	43.858	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	997960	+		4111	10800	2014	2027							0.06566889028476908
ELILPHYQL	9	Unmodified	_ELILPHYQL_					0	0	0			REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	REV__nc|ENSG00000165863|Q8WW14-2|SPMIP5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	563.318774	1124.623	4.2748	0.002408	-4.2162	-0.0023751	0.058565	3.2991E-05	563.3156847476641	86.437	0.61844	87.984	87.797	88.415	1.547	-0.043837	-0.0025631	NaN	43.858	32	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2694200	+		4112	10800	2014	2027							0.06566889028476908
ELIRDREVKKY	11	Unmodified	_ELIRDREVKKY_					0	0	0		tr|A0A7D6ZXL9|A0A7D6ZXL9_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06085PE=3SV=1	tr|A0A7D6ZXL9|A0A7D6ZXL9_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06085PE=3SV=1	tr|A0A7D6ZXL9|A0A7D6ZXL9_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06085PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6136047244072	3	483.612181	1447.81471	0.44201	0.00021376	1.2778	0.00061794	1.7198	0.0008317	483.6125527806408	23.549	0.3864	25.2	25.023	25.409	1.6511					26	12	3	0	0	0	0.98969	1	9838	9838		4.4062	1.7749	1	572850			4113	17191	2015	2028	4960	4960					0.10871764988769428
ELITAAQNL	9	Unmodified	_ELITAAQNL_					0	0	0		nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD;nc|ENSG00000198947|P11532-13|DMD;nc|ENSG00000198947|P11532-16|DMD;nc|ENSG00000198947|P11532-12|DMD;nc|ENSG00000198947|P11532-15|DMD;nc|ENSG00000198947|P11532-14|DMD;nc|ENSG00000198947|P11532-3|DMD;nc|ENSG00000198947|P11532-2|DMD	nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000198947|P11532-4|DMD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.3112365603447	2	486.771657	971.528761	1.818	0.00088493	-0.21834	-0.00010628	1.5996	0.00077865	486.77252580259693	64.933	0.46806	66.842	66.658	67.126	1.9085					22	14	2	0	0	0	0.08828	1	27311	27311		28.487	0	1	1598800			4114	5108	2016	2029	4961	4961					0.04185750206318062
ELKALGYKDVS	11	Unmodified	_ELKALGYKDVS_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.8419677615166	2	611.837528	1221.6605	2.4849	0.0015204	1.0392	0.0006358	3.5241	0.0021562	611.838315691644	87.023	0.9509	87.267	86.576	87.527	0.24387					261	37	8	0	0	0	0.98765	1	36556	36556		4.5289	1.7937	1	264290000			4115	4394	2017	2030	4962	4962					0.058539355034326945
ELKALKMI	8	Unmodified	_ELKALKMI_					0	0	0			REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2959472537041	2	473.293714	944.572874	2.6376	0.0012483	1.494	0.00070711	4.1316	0.0019554	473.29465900672784	62.443	0.3391	62.773	62.604	62.943	0.32974					18	10	2	0	0	0	0.7528	2	26183	26133;26183		25.399	1.1894	1	910970	+		4116	15027	2018	2031	4963;4964	4964					0.098370630989848
ELKALKMI	8	Unmodified	_ELKALKMI_					0	0	0			REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2957946658134	2	473.293714	944.572874	3.2548	0.0015405	-0.39634	-0.00018759	2.8585	0.0013529	473.29380581161536	61.164	0.4922	62.583	62.314	62.806	1.4196					45	15	4	0	0	0	0.49046	2	25601	25601;25649		48.346	8.3885	1	7804800	+		4117	15027	2018	2031	4965;4966	4965					0.098370630989848
ELKALKMI	8	Unmodified	_ELKALKMI_					0	0	0			REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	REV__tr|A0A553SMM5|A0A553SMM5_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2957946658134	2	473.293714	944.572874	3.6256	0.001716	-1.3426	-0.00063546	2.283	0.0010805	473.2935331790874	60.566	0.52605	62.531	62.324	62.85	1.9653					48	16	4	0	0	0	0.60362	1	25382	25382		39.957	3.8303	1	7514400	+		4118	15027	2018	2031	4967	4967					0.098370630989848
ELKDKPLIIYR	11	Unmodified	_ELKDKPLIIYR_					0	0	0		tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4231445193291	2	694.41902	1386.82349	2.5153	0.0017467	2.7989	0.0019436	5.3142	0.0036903	694.4213578114241	85.935	0.7025	86.188	85.943	86.646	0.25227					38	22	3	0	0	0	1.0174	1	35926	35926		2.7352	0.23671	1	975160			4119	16882	2019	2032	4968	4968					0.14554738625292885
ELKFRKQRRLY	11	Unmodified	_ELKFRKQRRLY_					0	0	0			REV__ENSG00000170608|ENST00000302177|FOXA3	REV__ENSG00000170608|ENST00000302177|FOXA3	MSMS	GG20161007_CRH_Patient100_W632_02	4	768.8568603396416	2	768.959709	1535.90486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.929	1	98.185	97.685	98.685	0.25636								0	0	0	0.63775	1	41201	41201		5.2969	3.9674	1		+		4120	10993	2020	2033	4969	4969					0.15834859107894772
ELKKAPVRTRA	11	Unmodified	_ELKKAPVRTRA_					0	0	0			REV__ENSG00000170876|ENST00000306077|TMEM43	REV__ENSG00000170876|ENST00000306077|TMEM43	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.5984069705009	3	423.598094	1267.77245	0.93723	0.00039701	0.076208	3.2282E-05	1.0134	0.00042929	423.59812200535475	94.407	0.58418	94.407	94.087	94.671	0					63	17	5	0	0	0	1.0372	1	39470	39470		1.0136	0.051299	1	35375000	+		4121	10999	2021	2034	4970	4970					0.14927834371087556
ELKKAPVRTRA	11	Unmodified	_ELKKAPVRTRA_					0	0	0			REV__ENSG00000170876|ENST00000306077|TMEM43	REV__ENSG00000170876|ENST00000306077|TMEM43	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.5988342165947	3	423.598094	1267.77245	4.1516	0.0017586	-2.0366	-0.00086269	2.1151	0.00089593	423.59720599206855	93.597	0.57309	94.468	94.194	94.767	0.87176					55	17	5	0	0	0	1.0254	1	39414	39414		2.2527	0.51045	1	13232000	+		4122	10999	2021	2034	4971	4971					0.14927834371087556
ELKKGQILEVV	11	Unmodified	_ELKKGQILEVV_					0	0	0		tr|A0A7D6ZVY1|A0A7D6ZVY1_9CLOTFlagellarproteinFliLOS=ClostridiumintestinaleOX=36845GN=HZF06_16820PE=3SV=1	tr|A0A7D6ZVY1|A0A7D6ZVY1_9CLOTFlagellarproteinFliLOS=ClostridiumintestinaleOX=36845GN=HZF06_16820PE=3SV=1	tr|A0A7D6ZVY1|A0A7D6ZVY1_9CLOTFlagellarproteinFliLOS=ClostridiumintestinaleOX=36845GN=HZF06_16820PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3848754763603	2	628.384645	1254.75474	1.7672	0.0011105	-1.9569	-0.0012297	-0.18975	-0.00011924	628.3832686380024	77.87	0.72878	78.18	77.912	78.641	0.30933					55	22	3	0	0	0	1.037	2	32544	32544;32647		1.0715	0	1	1194800			4123	17161	2022	2035	4972;4973	4972					0.13755074325536043
ELKKKQKLKWK	11	Unmodified	_ELKKKQKLKWK_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	728.9719116091728	2	728.971754	1455.92895	2.549	0.0018582	-2.6727	-0.0019483	-0.1237	-9.0174E-05	728.9702349515733	105.78	0.12697	105.94	105.87	106	0.15859					20	6	4	0	0	0	1.0366	1	45137	45137		1.1933	0.12188	1	53550000	+		4124	10488	2023	2036	4974	4974					0.21922699541551083
ELKKKQKLKWK	11	Unmodified	_ELKKKQKLKWK_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	728.971754	1455.92895	1.3856	0.0010101	-1.4978	-0.0010919	-0.11222	-8.1808E-05	728.9716349251582	105.85	0.081772	105.85	105.79	105.88	0	-0.046351	0.0022208	NaN	1.1933	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6521200	+		4125	10488	2023	2036							0.21922699541551083
ELKKKQKLKWK	11	Unmodified	_ELKKKQKLKWK_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	728.971754	1455.92895	2.7124	0.0019773	-2.8787	-0.0020985	-0.16632	-0.00012124	729.4708850121392	105.8	0.10072	105.86	105.8	105.9	0.05455	-0.034026	0.00020756	NaN	1.1933	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7307200	+		4126	10488	2023	2036							0.21922699541551083
ELKKKQKLKWK	11	Unmodified	_ELKKKQKLKWK_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	728.971754	1455.92895	2.549	0.0018582	-2.6727	-0.0019483	-0.1237	-9.0174E-05	728.9702349515733	105.78	0.12697	105.94	105.87	106	0.15859	0.04425	0.00050792	NaN	1.1933	20	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53550000	+		4127	10488	2023	2036							0.21922699541551083
ELKKLKTL	8	Unmodified	_ELKKLKTL_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10;ENST00000491074.5_1_2:183605037-183619453:+|nuORF;ENST00000418559.5_1_2:183605037-183617329:+|nuORF	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.8273193240166	2	486.826235	971.637917	1.2025	0.00058539	0.82997	0.00040405	2.0324	0.00098944	486.8266921714306	107.7	0.27515	107.7	107.58	107.86	0					49	14	5	0	0	0	0.89051	1	46200	46200		2.3027	0	1	789060000			4128	956	2024	2037	4975	4975					0.1509638089648888
ELKLELTHIKN	11	Unmodified	_ELKLELTHIKN_					0	0	0			REV__nc|ENSG00000158941|Q8N163-2|CCAR2	REV__nc|ENSG00000158941|Q8N163-2|CCAR2	MSMS	GG20161007_CRH_Patient100_W632_02	4	669.4905273318291	2	669.393002	1336.77145	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.338	1	96.645	96.145	97.145	0.3062								0	0	0	0.63775	1	40526	40526		4.897	1.3005	1		+		4129	10566	2025	2038	4976	4976					0.11653575211516909
ELKLIHPNI	9	Unmodified	_ELKLIHPNI_					0	0	0		tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.2892333865166	2	538.826766	1075.63898	2.6893	0.0014491	2.3346	0.0012579	5.0239	0.002707	538.8279702642011	78.092	0.35925	79.373	79.198	79.557	1.2809					20	11	2	0	0	0	0.11539	1	32802	32802		12.532	2.4576	1	955270			4130	17066	2026	2039	4977	4977					0.1041859526535518
ELKLIHPNI	9	Unmodified	_ELKLIHPNI_					0	0	0		tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	tr|A0A7D6ZFY5|A0A7D6ZFY5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20005PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	538.826766	1075.63898	1.3221	0.00071241	3.5227	0.0018981	4.8449	0.0026105	538.8289912909829	77.554	0.33445	79.305	79.073	79.407	1.7514	-0.033859	0.00084987	NaN	12.532	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	991410			4131	17066	2026	2039							0.1041859526535518
ELKLVYKRYA	10	Unmodified	_ELKLVYKRYA_					0	0	0		nc|ENSG00000152056|Q96PC3-3|AP1S3;nc|ENSG00000152056|Q96PC3|AP1S3;ENSG00000152056|ENST00000396654|AP1S3;nc|ENSG00000152056|Q96PC3-2|AP1S3	nc|ENSG00000152056|Q96PC3-3|AP1S3	nc|ENSG00000152056|Q96PC3-3|AP1S3	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8832275271416	2	641.87953	1281.74451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.15	1	82.15	81.65	82.65	0								0	0	0	0.66176	1	34222	34222		1.4819	0.15237	1				4132	3308	2027	2040	4978	4978					0.11490511391002656
ELKMHFDFLI	10	Unmodified	_ELKMHFDFLI_					0	0	0		ENST00000520623.5_1_8:27348689-27396319:+|nuORF;nc|ENSG00000120915|P34913-3|EPHX2;nc|ENSG00000120915|P34913-2|EPHX2;ENSG00000120915|ENST00000521400|EPHX2	ENST00000520623.5_1_8:27348689-27396319:+|nuORF	ENST00000520623.5_1_8:27348689-27396319:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	646.8387328982353	2	646.839017	1291.66348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.415	1	87.659	87.159	88.159	0.24387								0	0	0	0.65773	1	36652	36652		7.2892	0.56607	1				4133	2123	2028	2041	4979	4979					0.029314873566136157
ELKMLIPVILM	11	Unmodified	_ELKMLIPVILM_					0	0	0			REV__ENST00000354177.8_1_1:26144005-26144161:+|nuORF	REV__ENST00000354177.8_1_1:26144005-26144161:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	650.3955566287041	2	650.39257	1298.77059	2.0373	0.001325	3.4676	0.0022553	5.5048	0.0035803	650.3941568394523	79.314	2.3529	79.314	78.283	80.636	0					140	75	3	0	0	0	1.0131	1	33061	33061		2.9952	1.3426	1	2525000	+		4134	12534	2029	2042	4980	4980					0.13315321246614076
ELKMSDPLPV	10	Unmodified	_ELKMSDPLPV_					0	0	0			REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8025390505791	2	564.8021	1127.58965	1.9511	0.001102	-1.0855	-0.00061308	0.86565	0.00048892	564.8015786655096	38.784	0.33155	40.081	39.895	40.226	1.2961					23	10	3	0	0	0	0.74985	1	16296	16296		16.149	0.30192	1	2398700	+		4135	9232	2030	2043	4981	4981					0.030955191942666715
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3548461794853	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.95	1	85.95	85.45	86.45	0								0	0	0	0.63772	1	35811	35811		9.544	5.0151	1		+		4136	9246	2031	2044	4982	4982					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3596679568291	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.056	1	95.056	94.556	95.556	0								0	0	0	0.63774	1	39725	39725		7.609	2.3121	1		+		4137	9246	2031	2044	4983	4983					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3550292849541	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.085	1	62.415	61.915	62.915	0.32974								0	0	0	0.63771	1	26012	26012		10.8	2.0541	1		+		4138	9246	2031	2044	4984	4984					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3551513552666	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.394	1	79.695	79.195	80.195	0.30047								0	0	0	0.63771	1	33196	33196		10.8	5.0677	1		+		4139	9246	2031	2044	4985	4985					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3553344607353	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.961	1	80.262	79.762	80.762	0.30047								0	0	0	0.63774	1	33428	33428		7.1017	1.3699	1		+		4140	9246	2031	2044	4986	4986					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3556396365166	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.711	1	81.001	80.501	81.501	0.29056								0	0	0	0.63774	1	33741	33741		7.1017	2.2047	1		+		4141	9246	2031	2044	4987	4987					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3547851443291	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.844	1	82.124	81.624	82.624	0.2802								0	0	0	0.63771	1	34221	34221		10.8	2.644	1		+		4142	9246	2031	2044	4988	4988					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3549682497978	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.156	1	82.436	81.936	82.936	0.2802								0	0	0	0.63774	1	34353	34353		7.1017	0.47135	1		+		4143	9246	2031	2044	4989	4989					0.021191963472801945
ELKNEELDLER	11	Unmodified	_ELKNEELDLER_					0	0	0			REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	REV__nc|ENSG00000108061|Q9UQ13-2|SHOC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	694.3549682497978	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.06	1	55.465	54.965	55.965	1.4048								0	0	0	0.63771	1	22630	22630		10.8	2.644	1		+		4144	9246	2031	2044	4990	4990					0.021191963472801945
ELKNPKWRDDS	11	Unmodified	_ELKNPKWRDDS_					0	0	0			REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3554565310478	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.657	1	45.601	45.101	46.101	1.9438								0	0	0	0.63774	1	18307	18307		7.609	1.8771	1		+		4145	15112	2032	2045	4991	4991					0.01130053132555986
ELKNPKWRDDS	11	Unmodified	_ELKNPKWRDDS_					0	0	0			REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3564330935478	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.946	1	45.89	45.39	46.39	1.9438								0	0	0	0.63775	1	18425	18425		5.2969	0	1		+		4146	15112	2032	2045	4992	4992					0.01130053132555986
ELKPFIEEL	9	Unmodified	_ELKPFIEEL_					0	0	0		ENSG00000118507|ENST00000431975|AKAP7;ENST00000543815.5_1_6:131486241-131540820:+|nuORF	ENSG00000118507|ENST00000431975|AKAP7	ENSG00000118507|ENST00000431975|AKAP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3127929568291	2	559.310615	1116.60668	2.9972	0.0016764	1.302	0.0007282	4.2992	0.0024046	559.310146011395	70.368	0.38446	71.722	71.521	71.906	1.3536					37	11	5	0	0	0	0.031145	1	29539	29539		85.642	3.7513	1	6811500			4147	2037	2033	2046	4993	4993					0.053037630717199136
ELKQKARE	8	Unmodified	_ELKQKARE_					0	0	0			REV__MYH8|p.R1056Q|1|0.32|ENSG00000133020|chr17:10401133-10401133|C/T|missense_variant	REV__MYH8|p.R1056Q|1|0.32|ENSG00000133020|chr17:10401133-10401133|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2909118533134	2	501.290548	1000.56654	1.6159	0.00081002	0.54537	0.00027339	2.1613	0.0010834	501.2905682671978	67.241	1.5614	67.241	66.577	68.139	0					98	49	3	0	0	0	0.89124	1	27950	27950		1.8442	0	1	1969600	+		4148	14369	2034	2047	4994	4994					0.06628261191804086
ELKRLEEV	8	Unmodified	_ELKRLEEV_					0	0	0			REV__ENST00000499988.2_1_15:40986710-40986842:-|nuORF	REV__ENST00000499988.2_1_15:40986710-40986842:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2941467165947	2	508.292756	1014.57096	0.99689	0.00050671	1.1536	0.00058639	2.1505	0.0010931	508.29376229076627	31.002	0.21186	32.82	32.677	32.889	1.8177					9	6	2	0	0	0	0.71199	1	13016	13016		29.082	2.8134	1	586200	+		4149	13501	2035	2048	4995	4995					0.06425725614724342
ELKRLKLKPLD	11	Unmodified	_ELKRLKLKPLD_					0	0	0			REV__nc|ENSG00000248546|O43423|ANP32CP	REV__nc|ENSG00000248546|O43423|ANP32CP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.9706603884697	4	338.971057	1351.85512	-1.8818	-0.00063789	0.52594	0.00017828	-1.3559	-0.00045961	338.97134967247854	33.714	0.8035	33.714	33.328	34.131	0					99	25	5	0	0	0	1.0391	1	14225	14225		0.40827	0.24894	1	4120500	+		4150	14549	2036	2049	4996	4996					0.19326731379214834
ELKSSKERL	9	Unmodified	_ELKSSKERL_					0	0	0			REV__tr|A0A7D6ZGS5|A0A7D6ZGS5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23855PE=4SV=1	REV__tr|A0A7D6ZGS5|A0A7D6ZGS5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3176147341728	2	545.316763	1088.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.083	1	76.405	75.905	76.905	0.32163								0	0	0	0.42693	1	31820	31820		3.9444	1.3669	1		+		4151	15641	2037	2050	4997	4997					0.07820799534783873
ELKVKSKSL	9	Unmodified	_ELKVKSKSL_					0	0	0			REV__MYH6|p.S1271Cfs*26|1|0.05|ENSG00000197616|chr14:23389640-23389641|-/GCTCCCGC|frameshift_variant	REV__MYH6|p.S1271Cfs*26|1|0.05|ENSG00000197616|chr14:23389640-23389641|-/GCTCCCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3278686404228	2	516.326599	1030.63865	1.6482	0.00085102	-1.637	-0.00084524	0.01119	5.7776E-06	516.3257045731144	83.958	0.32086	85.146	84.987	85.307	1.1879					25	10	3	0	0	0	0.30098	1	35196	35196		25.399	6.1423	1	8939700	+		4152	11684	2038	2051	4998	4998					0.12455175545528618
ELKVQELRKYK	11	Unmodified	_ELKVQELRKYK_					0	0	0		nc|ENSG00000204178|Q8N5G2-2|MACO1;nc|ENSG00000204178|Q8N5G2-3|MACO1;ENSG00000204178|ENST00000374343|MACO1	nc|ENSG00000204178|Q8N5G2-2|MACO1	nc|ENSG00000204178|Q8N5G2-2|MACO1	MSMS	GG20161007_CRH_Patient100_W632_02	4	717.4261962771416	2	717.427376	1432.8402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.626	1	97.882	97.382	98.382	0.25636								0	0	0	0.63774	1	41071	41071		7.609	2.3121	1				4153	5126	2039	2052	4999	4999					0.14109239511230953
ELLAKLKP	8	Unmodified	_ELLAKLKP_					0	0	0		tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5364562869072	3	304.535661	910.585153	0.011205	3.4124E-06	1.3168	0.00040102	1.328	0.00040444	304.5361102748744	22.148	1.1307	22.371	22.205	23.336	0.223					56	37	4	0	0	0	0.88663	1	9265	9265		3.2813	0	1	13326000			4154	16381	2040	2053	5000	5000					0.1262842283366581
ELLAKLKP	8	Unmodified	_ELLAKLKP_					0	0	0		tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5367919802666	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.873	1	26.125	25.625	26.625	0.25197								0	0	0	1.0178	1	10806	10806		1.3295	0	1				4155	16381	2040	2053	5001	5001					0.1262842283366581
ELLAKLKP	8	Unmodified	_ELLAKLKP_					0	0	0		tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	tr|A0A553SMN4|A0A553SMN4_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5361205935478	3	304.535661	910.585153	-0.2394	-7.2905E-05	1.876	0.00057132	1.6366	0.00049841	304.53622473513764	20.617	1.041	22.192	21.997	23.038	1.5748					67	34	4	0	0	0	0.8909	1	8687	8687		1.3295	0	1	9542700			4156	16381	2040	2053	5002	5002					0.1262842283366581
ELLEPAPPWL	10	Unmodified	_ELLEPAPPWL_					0	0	0			REV__nc|ENSG00000130822|Q6P2M8-2|PNCK	REV__nc|ENSG00000130822|Q6P2M8-2|PNCK	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	583.0696288943291	2	582.818607	1163.62266	1.8713	0.0010906	-0.23907	-0.00013933	1.6322	0.0009513	583.3203369599487	43.995	0.35203	43.995	43.811	44.163	0					15	10	2	0	0	0	0.12525	1	18350	18350		6.7232	0	1	998720	+		4157	14428	2041	2054	5003	5003					0.04739469308628941
ELLEPLLSI	9	Unmodified	_ELLEPLLSI_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.2689697146416	2	513.807708	1025.60086	1.486	0.0007635	1.0585	0.00054387	2.5445	0.0013074	513.8089589364798	38.004	0.091381	39.288	39.246	39.337	1.284					4	2	2	0	0	0	0.11463	1	15958	15958		12.532	4.6214	1	801430			4158	2529	2042	2055	5004	5004					0.08908664560067336
ELLEPLLSIIR	11	Unmodified	_ELLEPLLSIIR_					0	0	0		ENSG00000132382|ENST00000254718|MYBBP1A;nc|ENSG00000132382|Q9BQG0-2|MYBBP1A;ENST00000574547.5_1_17:4442712-4447986:-|nuORF	ENSG00000132382|ENST00000254718|MYBBP1A	ENSG00000132382|ENST00000254718|MYBBP1A	MSMS	GG20161007_CRH_Patient100_W632_02	4	648.3965942263603	2	648.400295	1294.78604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.218	1	95.62	95.12	96.12	0.40208								0	0	0	0.63775	1	40061	40061		1.3295	0	1				4159	2529	2043	2056	5005	5005					0.1504364735967556
ELLFLFLWKWK	11	Unmodified	_ELLFLFLWKWK_					0	0	0		ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	ENST00000307403.6_1_7:155532339-155538302:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	761.9438964724541	2	761.944673	1521.87479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.32	1	102.51	102.01	103.01	0.19076								0	0	0	0.63775	1	43031	43031		1.3295	0	1				4160	5783	2044	2057	5006	5006					0.134731073899502
ELLFLLHR	8	Unmodified	_ELLFLLHR_					0	0	0			REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.5475341677666	3	347.54656	1039.61785	1.3884	0.00048254	0.76655	0.00026641	2.155	0.00074895	347.5468510524247	42.422	0.80695	42.743	42.574	43.381	0.32058					52	26	2	0	0	0	0.88791	1	17798	17798		3.9444	0	1	4306100	+		4161	11148	2045	2058	5007	5007					0.09962629956521596
ELLKLLLPL	9	Unmodified	_ELLKLLLPL_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	525.7138549685478	2	526.359911	1050.70527	0.85478	0.00044992	3.6114	0.0019009	4.4662	0.0023508	526.3615183270384	21.865	0.38844	22.088	21.931	22.32	0.223					21	12	2	0	0	0	0.11955	1	9185	9185		0	0	1	804070			4162	4700	2046	2059	5008	5008					0.18194411107424457
ELLKLVAST	9	Unmodified	_ELLKLVAST_					0	0	0			REV__tr|A0A553SS31|A0A553SS31_NIACIAmidohydrolase-relateddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02240PE=4SV=1	REV__tr|A0A553SS31|A0A553SS31_NIACIAmidohydrolase-relateddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02240PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2025634646416	3	325.202459	972.585547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.41	1	111.56	111.06	112.06	0.15038								0	0	0	0.42693	1	48283	48283		1.0715	0.10919	1		+		4163	15191	2047	2060	5009	5009					0.09815797762848888
ELLLRRLRWYF	11	Unmodified	_ELLLRRLRWYF_					0	0	0			REV__nc|ENSG00000278540|Q13085-3|ACACA	REV__nc|ENSG00000278540|Q13085-3|ACACA	MSMS	GG20161007_CRH_Patient100_W632_01	3	782.9279662966728	2	782.959178	1563.9038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.341	1	99.538	99.038	100.04	0.19767								0	0	0	0.63775	1	41820	41820		1.3295	0.9789	1		+		4164	12023	2048	2061	5010	5010					0.14440644738965602
ELLLSGPPE	9	Unmodified	_ELLLSGPPE_					0	0	0		TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant;nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	477.7629882693291	2	477.760758	953.506963	3.3852	0.0016173	-0.091027	-4.3489E-05	3.2941	0.0015738	477.7608000760005	87.295	0.74537	87.539	87.242	87.987	0.24387					59	25	3	0	0	0	0.70108	1	36585	36585		7.2892	1.5574	1	3116700			4165	2820	2049	2062	5011	5011					0.0283494545776648
ELLMSAEYIM	10	Unmodified	_ELLMSAEYIM_					0	0	0		tr|A0A7D6ZRR8|A0A7D6ZRR8_9CLOT3-deoxy-7-phosphoheptulonatesynthaseOS=ClostridiumintestinaleOX=36845GN=aroFPE=4SV=1	tr|A0A7D6ZRR8|A0A7D6ZRR8_9CLOT3-deoxy-7-phosphoheptulonatesynthaseOS=ClostridiumintestinaleOX=36845GN=aroFPE=4SV=1	tr|A0A7D6ZRR8|A0A7D6ZRR8_9CLOT3-deoxy-7-phosphoheptulonatesynthaseOS=ClostridiumintestinaleOX=36845GN=aroFPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	600.2893554568291	2	600.287968	1198.56138	1.6774	0.0010069	0.7712	0.00046294	2.4486	0.0014699	600.2887427137875	71.888	0.25351	72.213	72.102	72.355	0.32494					16	7	3	0	0	0	0.75645	1	30102	30102		15.847	1.9411	1	561510			4166	17128	2050	2063	5012	5012					-0.029955467773561395
ELLPYLSHQDS	11	Unmodified	_ELLPYLSHQDS_					0	0	0			REV__ENSG00000114638|ENST00000264234|UPK1B	REV__ENSG00000114638|ENST00000264234|UPK1B	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3228637576103	2	651.322242	1300.62993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.508	1	66.508	66.008	67.008	0								0	0	0	0.63774	1	27703	27703		8.1555	1.9497	1		+		4167	9410	2051	2064	5013	5013					-0.008358428816109154
ELLSIALTL	9	Unmodified	_ELLSIALTL_					0	0	0		tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5992309451103	1	972.597575	971.590298	0.91015	0.00088521	1.3892	0.0013512	2.2994	0.0022364	972.5981616286493	77.41	0.31296	79.161	78.977	79.29	1.7514					15	9	2	0	0	0	0.13873	1	32429	32429		39.957	3.9131	1	1449400			4168	16563	2052	2065	5014	5014					0.10336681905596379
ELLSVKVSF	9	Unmodified	_ELLSVKVSF_					0	0	0			REV__ENSG00000138160|ENST00000260731|KIF11	REV__ENSG00000138160|ENST00000260731|KIF11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2994872927666	2	511.30005	1020.58555	1.0676	0.00054589	-1.1194	-0.00057235	-0.051762	-2.6466E-05	511.2996732327818	56.959	0.24175	58.927	58.751	58.992	1.9684					12	7	2	0	0	0	0.10993	1	23871	23871		46.021	9.5148	1	2878600	+		4169	10047	2053	2066	5015	5015					0.07607797762864266
ELLYIINL	8	Unmodified	_ELLYIINL_					0	0	0			REV__nc|ENSG00000089101|Q8NHU2-3|CFAP61	REV__nc|ENSG00000089101|Q8NHU2-3|CFAP61	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7968322634697	2	495.797143	989.579734	1.2663	0.00062781	-2.808	-0.0013922	-1.5417	-0.00076439	495.79580889235757	69.336	0.43772	69.336	69.109	69.547	0					31	13	3	0	0	0	0.87803	1	28823	28823		10.183	2.2732	1	3847000	+		4170	8201	2054	2067	5016	5016					0.0845269925117691
ELMVLINTL	9	Unmodified	_ELMVLINTL_					0	0	0		tr|A0A7D6VPS3|A0A7D6VPS3_9CLOTDNAgyrasesubunitAOS=ClostridiumintestinaleOX=36845GN=gyrAPE=3SV=1	tr|A0A7D6VPS3|A0A7D6VPS3_9CLOTDNAgyrasesubunitAOS=ClostridiumintestinaleOX=36845GN=gyrAPE=3SV=1	tr|A0A7D6VPS3|A0A7D6VPS3_9CLOTDNAgyrasesubunitAOS=ClostridiumintestinaleOX=36845GN=gyrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3044921755791	2	523.301736	1044.58892	2.175	0.0011382	1.4488	0.00075815	3.6238	0.0018963	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.53525	1	28779	28779		13.906	0	1	5777900			4171	16773	2055	2068	5017	5017					0.06840724545236299
ELNEEEGKK	9	Unmodified	_ELNEEEGKK_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.2708007693291	2	538.266936	1074.51932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.418	1	35.418	34.918	35.918	0								0	0	0	0.27791	1	14844	14844		20.454	0.039092	1		+		4172	11441	2056	2069	5018	5018					-0.01496062869864545
ELPEQFFQL	9	Unmodified	_ELPEQFFQL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;nc|ENSG00000137269|Q9BTT6-2|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7921630740166	2	575.792589	1149.57063	1.4297	0.00082319	-0.66547	-0.00038317	0.7642	0.00044002	575.792547152794	83.929	1.2876	85.117	84.736	86.024	1.1879					70	41	3	0	0	0	0.053939	4	35331	35131;35181;35231;35331		66.457	24.617	1	4688200			4173	2764	2057	2070	5019;5020;5021;5022	5022					0.0018230589485028759
ELPEQFFQL	9	Unmodified	_ELPEQFFQL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;nc|ENSG00000137269|Q9BTT6-2|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7915527224541	2	575.792589	1149.57063	1.7516	0.0010086	-0.85037	-0.00048963	0.90124	0.00051893	575.7922376041598	83.507	1.2068	85.145	84.694	85.901	1.6379					75	38	3	0	0	0	0.049839	5	35007	34912;34958;35007;35058;35113		68.081	28.131	1	4212100			4174	2764	2057	2070	5023;5024;5025;5026;5027	5025					0.0018230589485028759
ELPKVIPV	8	Unmodified	_ELPKVIPV_					0	0	0		ENST00000337339.6_1_X:11785039-11785279:+|nuORF	ENST00000337339.6_1_X:11785039-11785279:+|nuORF	ENST00000337339.6_1_X:11785039-11785279:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	447.1188842654228	2	447.786579	893.558604	1.6176	0.00072433	2.3805	0.001066	3.9981	0.0017903	447.7878166148798	24.465	0.18244	25.706	25.641	25.823	1.241					9	5	2	0	0	0	2.3239	1	10220	10220		5.7604	0	1	250220			4175	5921	2058	2071	5028	5028					0.10756733942343999
ELPQDRSLD	9	Unmodified	_ELPQDRSLD_					0	0	0			REV__ENST00000548924.5_1_12:70901743-70904223:+|nuORF	REV__ENST00000548924.5_1_12:70901743-70904223:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1639282107353	2	536.767103	1071.51965	1.5778	0.00084691	-1.452	-0.00077939	0.12578	6.7517E-05	536.7661253338206	67.637	0.25203	67.637	67.537	67.789	0					25	7	5	0	0	0	0.11851	1	28227	28227		0.40072	0	1	1764600	+		4176	13816	2059	2072	5029	5029					-0.013246431499965183
ELPQKMKGKLK	11	Unmodified	_ELPQKMKGKLK_					0	0	0		HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant;ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3971435427666	2	650.39449	1298.77443	1.9699	0.0012812	1.2665	0.00082373	3.2364	0.0021049	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0366	1	34511	34511		1.1933	0	1	10064000			4177	873	2060	2073	5030	5030					0.13699127064683125
ELQALRDLRQK	11	Unmodified	_ELQALRDLRQK_					0	0	0		nc|ENSG00000151718|Q6AWC2-2|WWC2;ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2;nc|ENSG00000151718|Q6AWC2-3|WWC2;nc|ENSG00000151718|Q6AWC2-4|WWC2;nc|ENSG00000151718|Q6AWC2-7|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	685.3119994997978	2	685.39915	1368.78375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.703	1	97.01	96.51	97.51	0.3062								0	0	0	0.63775	1	40679	40679		5.2969	0	1				4178	3298	2061	2074	5031	5031					0.11410611674523352
ELQDALALI	9	Unmodified	_ELQDALALI_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2819396853447	2	493.281857	984.549162	2.6914	0.0013276	-1.8519	-0.00091351	0.83949	0.00041411	493.2805994419276	79.895	0.40128	81.147	80.955	81.357	1.2512					26	12	3	0	0	0	0.22154	1	33573	33573		30.637	0	1	2041000			4179	2341	2062	2075	5032	5032					0.05626920866131968
ELQLCCQDISQ	11	Unmodified	_ELQLCCQDISQ_					0	0	0			REV__ENST00000484207.5_1_14:96131359-96134831:+|nuORF	REV__ENST00000484207.5_1_14:96131359-96134831:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	640.2891113162041	2	640.286488	1278.55842	2.3035	0.0014749	0.59832	0.0003831	2.9018	0.001858	640.2870506241568	92.531	0.48521	92.531	92.258	92.744	0					62	15	6	0	0	0	0.98155	1	38619	38619		4.897	0	1	5932400	+		4180	13383	2063	2076	5033	5033					-0.06971421902130714
ELRCLLNK	8	Unmodified	_ELRCLLNK_					0	0	0		ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	ENSG00000100139|ENST00000215957|MICALL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	988.5654785037041	1	988.560812	987.553536	4.7201	0.0046661	1.1989	0.0011852	5.919	0.0058513	988.5617945294728	74.166	0.24862	75.484	75.342	75.591	1.318					12	7	2	0	0	0	0.66196	1	31104	31104		34.102	13.231	1	2119400			4181	1246	2064	2077	5034	5034					0.059261068080672885
ELRELRFLQK	10	Unmodified	_ELRELRFLQK_					0	0	0		nc|ENSG00000065613|Q9H2G2-2|SLK;ENSG00000065613|ENST00000369755|SLK	nc|ENSG00000065613|Q9H2G2-2|SLK	nc|ENSG00000065613|Q9H2G2-2|SLK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1203491091728	3	444.597983	1330.77212	0.49879	0.00022176	0.67409	0.0002997	1.1729	0.00052146	444.9323771101452	18.763	0.18519	20.211	20.118	20.303	1.448					9	5	2	0	0	0	0.1256	1	7837	7837		0	0	1	166250			4182	792	2065	2078	5035	5035					0.11996414651230225
ELRKEEFWKF	10	Unmodified	_ELRKEEFWKF_					0	0	0		nc|ENSG00000185792|Q7RTR0-2|NLRP9;ENSG00000185792|ENST00000332836|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	471.3078491091728	3	471.250472	1410.72959	2.9981	0.0014129	3.6974	0.0017424	6.6955	0.0031552	471.2528793671703	75.155	0.27358	76.462	76.311	76.585	1.3063					18	8	3	0	0	0	0.12556	1	31567	31567		0.69767	0	1	651980			4183	4759	2066	2079	5036	5036					0.04065019522977309
ELRKEEFWKF	10	Unmodified	_ELRKEEFWKF_					0	0	0		nc|ENSG00000185792|Q7RTR0-2|NLRP9;ENSG00000185792|ENST00000332836|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	471.3080932497978	3	471.250472	1410.72959	3.201	0.0015085	1.5738	0.00074165	4.7748	0.0022501	471.58577156162823	74.732	0.28212	76.513	76.356	76.638	1.7817					12	8	2	0	0	0	0.12557	1	31318	31318		1.7423	0.41263	1	567080			4184	4759	2066	2079	5037	5037					0.04065019522977309
ELRKYWKKKQY	11	Unmodified	_ELRKYWKKKQY_					0	0	0			REV__tr|A0A553SPL3|A0A553SPL3_NIACIMetalABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_26640PE=4SV=1	REV__tr|A0A553SPL3|A0A553SPL3_NIACIMetalABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_26640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	785.1539794802666	2	785.448643	1568.88273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.26	1	100.44	99.942	100.94	0.18047								0	0	0	0.63775	1	42195	42195		1.3295	0	1		+		4185	15094	2067	2080	5038	5038					0.12104634639445067
ELRMKQNLQKW	11	Unmodified	_ELRMKQNLQKW_					0	0	0		nc|ENSG00000131018|Q8NF91-4|SYNE1;ENSG00000131018|ENST00000367255|SYNE1;ENST00000478916.5_1_6:152456172-152464916:-|nuORF;ENST00000460912.6_1_6:152443573-152489284:-|nuORF;nc|ENSG00000131018|Q8NF91-9|SYNE1;nc|ENSG00000131018|Q8NF91-3|SYNE1;nc|ENSG00000131018|Q8NF91-11|SYNE1;nc|ENSG00000131018|Q8NF91-8|SYNE1;nc|ENSG00000131018|Q8NF91-2|SYNE1;ENST00000367256.9_1_6:152443573-152639413:-|nuORF	nc|ENSG00000131018|Q8NF91-4|SYNE1	nc|ENSG00000131018|Q8NF91-4|SYNE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	737.4005615115166	2	737.403378	1472.7922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.6	1	102.76	102.26	103.26	0.16445								0	0	0	0.63775	1	43203	43203		2.9952	0.26005	1				4186	2475	2068	2081	5039	5039					0.07471842319523603
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828002810478	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.967	1	3.967	3.467	4.467	0								0	0	0	0.63775	1	1630	1630		0.094841	0	1				4187	3116	2069	2082	5040	5040					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8822509646416	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6843	1	8.6843	8.1843	9.1843	0								0	0	0	0.63775	1	3573	3573		0.094841	0	1				4188	3116	2069	2082	5041	5041					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8828918337822	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9503	1	2.0973	1.5973	2.5973	0.14703								0	0	0	0.63775	1	802	802		0.094841	0	1				4189	3116	2069	2082	5042	5042					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8825866580009	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.84202	1	1.4953	0.99533	1.9953	0.65331								0	0	0	0.63775	1	345	345		0.094841	0	1				4190	3116	2069	2082	5043	5043					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824035525322	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9111	1	2.5525	2.0525	3.0525	0.64135								0	0	0	0.63775	1	784	784		0.094841	0	1				4191	3116	2069	2082	5044	5044					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8823119997978	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0911	1	3.7252	3.2252	4.2252	0.63417								0	0	0	0.63775	1	1276	1276		0.094841	0	1				4192	3116	2069	2082	5045	5045					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8819457888603	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5846	1	7.2059	6.7059	7.7059	0.62127								0	0	0	0.63775	1	2721	2721		0.094841	0	1				4193	3116	2069	2082	5046	5046					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831359744072	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5156	1	2.264	1.764	2.764	0.7484								0	0	0	0.63775	1	627	627		0.094841	0	1				4194	3116	2069	2082	5047	5047					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827087283134	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6327	1	5.3691	4.8691	5.8691	0.73642								0	0	0	0.63775	1	1920	1920		0.094841	0	1				4195	3116	2069	2082	5048	5048					-0.010198002420338526
ELRQLLDCDTP	11	Unmodified	_ELRQLLDCDTP_					0	0	0		ENSG00000145675|ENST00000521381|PIK3R1;nc|ENSG00000145675|P27986-4|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	ENSG00000145675|ENST00000521381|PIK3R1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8826171755791	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6792	1	9.4137	8.9137	9.9137	0.73452								0	0	0	0.63775	1	3609	3609		0.094841	0	1				4196	3116	2069	2082	5049	5049					-0.010198002420338526
ELRQLLKAMVV	11	Unmodified	_ELRQLLKAMVV_					0	0	0			REV__nc|ENSG00000036530|Q9Y6A2-3|CYP46A1	REV__nc|ENSG00000036530|Q9Y6A2-3|CYP46A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3962280154228	2	650.39449	1298.77443	1.9699	0.0012812	1.2665	0.00082373	3.2364	0.0021049	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0362	1	34182	34182		1.3295	0.13619	1	10064000	+		4197	8583	2070	2083	5050	5050					0.13699127064660388
ELRQRRRRRRQ	11	Unmodified	_ELRQRRRRRRQ_					0	0	0		ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	805.4885131716728	2	805.488353	1608.96215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.626	1	99.852	99.352	100.35	0.22545								0	0	0	0.63775	1	41907	41907		1.3295	1.3295	1				4198	5499	2071	2084	5051	5051					0.18203139156798898
ELRRKKRKWS	10	Unmodified	_ELRRKKRKWS_					0	0	0			REV__ENST00000234296.6_1_2:201776004-201776058:-|nuORF	REV__ENST00000234296.6_1_2:201776004-201776058:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1465026736259	3	462.952872	1385.83679	3.323	0.0015384	-2.7494	-0.0012728	0.57363	0.00026557	462.9512863508246	92.705	0.56695	92.873	92.591	93.158	0.16835					27	17	2	0	0	0	0.12561	1	38779	38779		0.15932	0.064481	1	831370	+		4199	12113	2072	2085	5052	5052					0.15930034247890035
ELRRMYLF	8	Unmodified	_ELRRMYLF_					0	0	0		nc|ENSG00000240053|Q8NDX9-2|LY6G5B;ENSG00000240053|ENST00000375864|LY6G5B	nc|ENSG00000240053|Q8NDX9-2|LY6G5B	nc|ENSG00000240053|Q8NDX9-2|LY6G5B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	564.3115112185478	2	564.305144	1126.59573	4.6772	0.0026394	0.51104	0.00028838	5.1882	0.0029277	564.3054896823728	87.221	0.30656	88.717	88.518	88.825	1.4953					18	9	3	0	0	0	2.3239	1	36811	36811		8.5933	0.68312	1	1254000			4200	5330	2073	2086	5053	5053					0.03750082216447481
ELRRNYHRRL	10	Unmodified	_ELRRNYHRRL_					0	0	0			REV__ENST00000555945.1_1_14:45431624-45465140:+|nuORF	REV__ENST00000555945.1_1_14:45431624-45465140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	706.4810668826103	2	706.902725	1411.7909	2.5562	0.001807	-2.6183	-0.0018509	-0.0621	-4.3898E-05	706.9024017158666	112.66	0.29175	112.81	112.63	112.92	0.14912					12	9	2	0	0	0	0.12547	1	48794	48794		3.2813	2.2098	1	699410	+		4201	11728	2074	2087	5054	5054					0.10147389065627976
ELRRRIIQWL	10	Unmodified	_ELRRRIIQWL_					0	0	0		nc|ENSG00000163430|Q12841-2|FSTL1;ENSG00000163430|ENST00000295633|FSTL1	nc|ENSG00000163430|Q12841-2|FSTL1	nc|ENSG00000163430|Q12841-2|FSTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	691.9230224490166	2	691.922595	1381.83064	2.3595	0.0016326	1.8132	0.0012546	4.1728	0.0028872	691.9227555321946	75.29	0.42438	76.597	76.343	76.768	1.3063					30	13	3	0	0	0	0.72878	1	31621	31621		17.113	5.6182	1	1329300			4202	3679	2075	2088	5055	5055					0.15499516016370762
ELRRRIIQWL	10	Unmodified	_ELRRRIIQWL_					0	0	0		nc|ENSG00000163430|Q12841-2|FSTL1;ENSG00000163430|ENST00000295633|FSTL1	nc|ENSG00000163430|Q12841-2|FSTL1	nc|ENSG00000163430|Q12841-2|FSTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	691.9242431521416	2	691.922595	1381.83064	2.1678	0.0015	2.7149	0.0018785	4.8827	0.0033785	691.9237533503431	74.842	0.31018	76.624	76.45	76.76	1.7817					20	9	3	0	0	0	0.60583	1	31402	31402		22.736	11.242	1	1969500			4203	3679	2075	2088	5056	5056					0.15499516016370762
ELRRRRPLRRR	11	Unmodified	_ELRRRRPLRRR_					0	0	0		ENST00000376771.8_1_X:48398216-48399763:+|nuORF	ENST00000376771.8_1_X:48398216-48399763:+|nuORF	ENST00000376771.8_1_X:48398216-48399763:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	782.5010253787041	2	782.49819	1562.98183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.31	1	102.5	102	103	0.19076								0	0	0	0.63775	1	43027	43027		1.3295	0	1				4204	6193	2076	2089	5057	5057					0.22285515167573067
ELRSKVKRLIR	11	Unmodified	_ELRSKVKRLIR_					0	0	0		ENST00000528685.1_1_11:71498671-71500866:+|nuORF;ENST00000338711.9_1_12:8393265-8395508:-|nuORF	ENST00000528685.1_1_11:71498671-71500866:+|nuORF	ENST00000528685.1_1_11:71498671-71500866:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	699.4570800662041	2	699.456802	1396.89905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.69	1	102.86	102.36	103.36	0.16445								0	0	0	0.63775	1	43250	43250		1.3295	0	1				4205	5924	2077	2090	5058	5058					0.21647760596215448
ELRTWRRNLR	10	Unmodified	_ELRTWRRNLR_					0	0	0		ENST00000366999.8_1_1:211848804-211848885:-|nuORF	ENST00000366999.8_1_1:211848804-211848885:-|nuORF	ENST00000366999.8_1_1:211848804-211848885:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	700.6196166872978	2	700.405101	1398.79565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.37	1	114.52	114.02	115.02	0.14912								0	0	0	0.66166	1	49487	49487		1.6526	0	1				4206	6055	2078	2091	5059	5059					0.11220273208414255
ELRVHRRL	8	Unmodified	_ELRVHRRL_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8338500857353	2	539.833249	1077.65194	2.5759	0.0013905	-0.44267	-0.00023897	2.1332	0.0011516	539.833027364805	77.616	0.56568	78.897	78.663	79.229	1.2809					30	17	2	0	0	0	0.89008	1	32575	32575		2.5775	0.51773	1	1106700	+		4207	10035	2079	2092	5060	5060					0.11622471168129778
ELSAFSFEL	9	Unmodified	_ELSAFSFEL_					0	0	0			REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	REV__ENST00000607809.5_1_12:54472874-54474119:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7585327029228	2	521.758215	1041.50188	0.86985	0.00045385	1.4783	0.00077132	2.3482	0.0012252	521.7594377962865	70.767	0.42118	72.605	72.411	72.832	1.8378					24	13	3	0	0	0	0.37357	1	29748	29748		21.747	4.8044	1	2559700	+		4208	14145	2080	2093	5061	5061					-0.01721358404847706
ELSDVLIYL	9	Unmodified	_ELSDVLIYL_					0	0	0		ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1918823122978	2	532.79734	1063.58013	2.0637	0.0010995	0.5352	0.00028515	2.5989	0.0013847	532.7975382529711	92.18	0.375	92.18	91.915	92.29	0					21	11	2	0	0	0	0.097511	1	38516	38516		16.942	14.053	1	1027000			4209	4535	2081	2094	5062	5062					0.05088074180366675
ELSDVLIYL	9	Unmodified	_ELSDVLIYL_					0	0	0		ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1918823122978	2	532.79734	1063.58013	2.7545	0.0014676	-0.56444	-0.00030073	2.1901	0.0011669	532.7967980475186	91.837	0.48291	92.027	91.723	92.206	0.19041					23	14	3	0	0	0	0.084274	1	38460	38460		16.942	5.302	1	846860			4210	4535	2081	2094	5063	5063					0.05088074180366675
ELSDVLIYL	9	Unmodified	_ELSDVLIYL_					0	0	0		ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7996703982353	2	532.79734	1063.58013	4.2041	0.0022399	-0.035443	-1.8884E-05	4.1686	0.002221	532.7972130195169	91.007	0.44662	91.989	91.781	92.227	0.98157					32	13	3	0	0	0	0.1735	1	38352	38352		36.044	7.5574	1	3210100			4211	4535	2081	2094	5064	5064					0.05088074180366675
ELSDVLIYL	9	Unmodified	_ELSDVLIYL_					0	0	0		ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	ENSG00000179958|ENST00000319285|DCTPP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1924316287041	2	532.79734	1063.58013	4.068	0.0021674	-0.80821	-0.00043061	3.2597	0.0017368	532.7969326283696	90.645	0.54588	92.011	91.734	92.28	1.366					33	16	3	0	0	0	0.11645	1	38225	38225		8.5933	2.2392	1	2242400			4212	4535	2081	2094	5065	5065					0.05088074180366675
ELSENNSPWKV	11	Unmodified	_ELSENNSPWKV_					0	0	0		SDK1|p.Y739Ifs*8|1|0.12|ENSG00000146555|chr7:4011049-4011049|T/-|frameshift_variant;SDK1|p.V776Gfs*52|1|0.09|ENSG00000146555|chr7:4012142-4012142|T/-|frameshift_variant;SDK1|p.L1190Afs*107|1|0.14|ENSG00000146555|chr7:4113417-4113418|-/AT|frameshift_variant;SDK1|p.G1830Rfs*24|1|0.09|ENSG00000146555|chr7:4210109-4210110|-/CAGACAATGGACTC|frameshift_variant;nc|ENSG00000146555|Q7Z5N4-3|SDK1;ENSG00000146555|ENST00000404826|SDK1	SDK1|p.Y739Ifs*8|1|0.12|ENSG00000146555|chr7:4011049-4011049|T/-|frameshift_variant	SDK1|p.Y739Ifs*8|1|0.12|ENSG00000146555|chr7:4011049-4011049|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	651.9867431521416	2	651.819867	1301.62518	0.74023	0.0004825	-0.5376	-0.00035042	0.20264	0.00013208	652.3207701102691	52.393	0.6239	53.789	53.62	54.244	1.3966					26	19	2	0	0	0	0.1452	1	22009	22009		12.873	2.7987	1	3870200			4213	3158	2082	2095	5066	5066					-0.013567270243811436
ELSLVRVQRR	10	Unmodified	_ELSLVRVQRR_					0	0	0		ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3841430544853	2	628.383303	1254.75205	2.0785	0.0013061	-1.1024	-0.00069272	0.97615	0.0006134	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.89803	1	33225	33225		1.6526	0.17072	1	6184900			4214	5080	2083	2096	5067	5067					0.13486663711250912
ELSLVRVQRR	10	Unmodified	_ELSLVRVQRR_					0	0	0		ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	ENSG00000198768|ENST00000371149|APCDD1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3829833865166	2	628.383303	1254.75205	2.3591	0.0014824	-1.133	-0.00071193	1.2261	0.00077046	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.89803	1	32819	32819		1.6526	0.17072	1	7119900			4215	5080	2083	2096	5068	5068					0.13486663711250912
ELSNMIYIF	9	Unmodified	_ELSNMIYIF_					0	0	0			REV__ENST00000482587.5_3_1:179833021-179833192:-|nuORF	REV__ENST00000482587.5_3_1:179833021-179833192:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1129.560961902142	1	1129.55981	1128.55253	1.3043	0.0014733	0.87345	0.00098662	2.1777	0.0024599	1129.5615859874124	84.267	0.3437	85.426	85.279	85.622	1.159					23	10	3	0	0	0	0.077188	1	35337	35337		71.922	6.6873	1	8373300	+		4216	13372	2084	2097	5069	5069					-0.0066015235152008245
ELSNMIYIF	9	Unmodified	_ELSNMIYIF_					0	0	0			REV__ENST00000482587.5_3_1:179833021-179833192:-|nuORF	REV__ENST00000482587.5_3_1:179833021-179833192:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2842285037041	2	565.283543	1128.55253	1.8609	0.0010519	0.25998	0.00014696	2.1209	0.0011989	565.2837495264466	83.793	0.4322	85.431	85.221	85.653	1.6379					38	13	4	0	0	0	0.056421	1	35160	35160		81.89	17.654	1	11558000	+		4217	13372	2084	2097	5070	5070					-0.0066015235152008245
ELSQGILPE	9	Unmodified	_ELSQGILPE_					0	0	0		tr|A0A7D6ZX93|A0A7D6ZX93_9CLOTAminopyrimidineaminohydrolaseOS=ClostridiumintestinaleOX=36845GN=tenAPE=3SV=1	tr|A0A7D6ZX93|A0A7D6ZX93_9CLOTAminopyrimidineaminohydrolaseOS=ClostridiumintestinaleOX=36845GN=tenAPE=3SV=1	tr|A0A7D6ZX93|A0A7D6ZX93_9CLOTAminopyrimidineaminohydrolaseOS=ClostridiumintestinaleOX=36845GN=tenAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2676269412041	2	493.263665	984.512776	1.5841	0.00078138	4.4376	0.0021889	6.0217	0.0029703	493.26557852682384	56.362	0.31718	56.362	56.2	56.517	0					17	10	2	0	0	0	0.49082	1	23481	23481		15.847	0	1	939220			4218	17187	2085	2098	5071	5071					0.019900439694424676
ELSQLQCLEI	10	Unmodified	_ELSQLQCLEI_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3023559451103	2	588.302464	1174.59037	1.4613	0.0008597	0.48136	0.00028318	1.9427	0.0011429	588.3027345305094	83.79	0.28818	84.978	84.827	85.115	1.1879					12	8	2	0	0	0	0.38174	1	35170	35170		34.402	0.29928	1	919080	+		4219	11919	2086	2099	5072	5072					0.01006313843299722
ELSQLQCLEI	10	Unmodified	_ELSQLQCLEI_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	588.302464	1174.59037	2.6352	0.0015503	0.88158	0.00051864	3.5167	0.0020689	588.3026976500153	85.065	0.22317	85.065	84.909	85.132	0	0.10317	-0.00018604	NaN	34.402	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280190	+		4220	11919	2086	2099							0.01006313843299722
ELSQLQCLEI	10	Unmodified	_ELSQLQCLEI_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	588.302464	1174.59037	2.4125	0.0014193	1.755	0.0010325	4.1675	0.0024517	588.3038554350861	84.577	0.25784	84.838	84.693	84.951	0.26083	-0.12356	0.0008416	NaN	34.402	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	382910	+		4221	11919	2086	2099							0.01006313843299722
ELSQLQCLEI	10	Unmodified	_ELSQLQCLEI_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	588.302464	1174.59037	1.4613	0.0008597	0.48136	0.00028318	1.9427	0.0011429	588.3027345305094	83.79	0.28818	84.978	84.827	85.115	1.1879	0.016099	-0.00065694	NaN	34.402	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	919080	+		4222	11919	2086	2099							0.01006313843299722
ELSQLQCLEI	10	Unmodified	_ELSQLQCLEI_					0	0	0			REV__ENSG00000240720|ENST00000458448|LRRD1	REV__ENSG00000240720|ENST00000458448|LRRD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	588.302464	1174.59037	1.8667	0.0010982	1.1036	0.00064925	2.9703	0.0017474	588.3037323346506	83.328	0.21939	84.966	84.791	85.01	1.6379	0.0042899	7.5202E-05	NaN	34.402	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	782810	+		4223	11919	2086	2099							0.01006313843299722
ELSRHWRR	8	Unmodified	_ELSRHWRR_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3128539919853	2	570.312681	1138.61081	0.72951	0.00041605	0.014665	8.3639E-06	0.74417	0.00042441	570.3127762752163	23.381	0.30466	23.381	23.229	23.534	0					22	9	3	0	0	0	0.87276	1	9722	9722		13.508	2.684	1	2239800			4224	4850	2087	2100	5073	5073					0.04704710128658007
ELSRHWRR	8	Unmodified	_ELSRHWRR_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;nc|ENSG00000188157|O00468-2|AGRN	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3116332888603	2	570.312681	1138.61081	1.1811	0.00067362	-1.0545	-0.00060139	0.12665	7.223E-05	570.3122165118788	22.47	0.28385	23.647	23.507	23.791	1.177					19	8	3	0	0	0	0.87276	1	9372	9372		13.508	2.684	1	1541900			4225	4850	2087	2100	5074	5074					0.04704710128658007
ELSYFEIPF	9	Unmodified	_ELSYFEIPF_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	572.3264037966728	2	572.78169	1143.54883	2.0364	0.0011664	3.7656	0.0021568	5.8019	0.0033232	572.7838239339379	84.73	0.36749	85.889	85.719	86.086	1.159					19	11	2	0	0	0	0.084274	1	35555	35555		30.225	7.0764	1	2597400	+		4226	10538	2088	2101	5075	5075					-0.017204988537287136
ELSYFEIPF	9	Unmodified	_ELSYFEIPF_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7866699099541	2	572.78169	1143.54883	2.2661	0.001298	2.7217	0.001559	4.9879	0.002857	572.7835263391522	84.217	0.38986	85.814	85.643	86.033	1.5962					22	12	2	0	0	0	0.5697	1	35394	35394		12.532	0	1	3060000	+		4227	10538	2088	2101	5076	5076					-0.017204988537287136
ELTDLKLQL	9	Unmodified	_ELTDLKLQL_					0	0	0		ENST00000548908.2_1_12:80173092-80180670:-|nuORF;ENST00000550903.5_1_12:80169711-80183436:-|nuORF;nc|ENSG00000058272|O14974-5|PPP1R12A;nc|ENSG00000058272|O14974-4|PPP1R12A;nc|ENSG00000058272|O14974-3|PPP1R12A;ENSG00000058272|ENST00000450142|PPP1R12A	ENST00000548908.2_1_12:80173092-80180670:-|nuORF	ENST00000548908.2_1_12:80173092-80180670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8193847537041	2	536.816064	1071.61758	1.7034	0.00091439	2.8162	0.0015118	4.5196	0.0024262	536.8173299915233	50.258	0.27289	52.235	51.977	52.25	1.9772					20	8	3	0	0	0	0.033504	1	21056	21056		81.89	7.6905	1	7541100			4228	734	2089	2102	5077	5077					0.08463165446005405
ELTEDDDAV	9	Unmodified	_ELTEDDDAV_					0	0	0		tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7158691287041	2	503.714202	1005.41385	3.5898	0.0018082	0.84384	0.00042505	4.4336	0.0022333	503.71459192515107	74.173	0.40036	75.491	75.31	75.711	1.318					34	12	4	0	0	0	0.66839	1	31133	31133		8.5933	0	1	1568400			4229	16800	2090	2103	5078	5078					-0.08864023786134112
ELTHREFELLH	11	Unmodified	_ELTHREFELLH_					0	0	0		tr|A0A553SHN6|A0A553SHN6_NIACITranscriptionalregulatoryproteinWalROS=NialliacirculansOX=1397GN=CEQ21_13330PE=4SV=1	tr|A0A553SHN6|A0A553SHN6_NIACITranscriptionalregulatoryproteinWalROS=NialliacirculansOX=1397GN=CEQ21_13330PE=4SV=1	tr|A0A553SHN6|A0A553SHN6_NIACITranscriptionalregulatoryproteinWalROS=NialliacirculansOX=1397GN=CEQ21_13330PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	712.3704101443291	2	712.370058	1422.72556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.29	1	102.48	101.98	102.98	0.19076								0	0	0	0.63775	1	43018	43018		5.2969	0	1				4230	16164	2091	2104	5079	5079					0.031109300292882835
ELTVYRERWP	10	Unmodified	_ELTVYRERWP_					0	0	0		ENST00000431515.6_2_16:3029804-3030348:-|nuORF;ENST00000572658.1_1_16:3029804-3030348:-|nuORF	ENST00000431515.6_2_16:3029804-3030348:-|nuORF	ENST00000431515.6_2_16:3029804-3030348:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	674.8567382693291	2	674.854044	1347.69353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.76	1	102.94	102.44	103.44	0.18066								0	0	0	0.65894	1	43243	43243		6.2058	0.47393	1				4231	6503	2092	2105	5080	5080					0.03359562346122402
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.7925903201103	2	611.789327	1221.5641	1.2637	0.00077312	-0.093993	-5.7504E-05	1.1697	0.00071562	611.7895808994355	22.398	0.42379	22.398	22.183	22.607	0					22	13	2	0	0	0	0.37357	1	9346	9346		21.747	1.3321	1	1225000	+		4232	10263	2093	2106	5081	5081					-0.03781910537509248
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.7896606326103	2	611.789327	1221.5641	0.60693	0.00037132	0.083166	5.088E-05	0.6901	0.0004222	611.7897182747251	22.372	0.20458	22.595	22.436	22.641	0.223					14	6	3	0	0	0	0.59203	1	9288	9288		11.64	1.5664	1	933770	+		4233	10263	2093	2106	5082	5082					-0.03781910537509248
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	611.789327	1221.5641	1.2637	0.00077312	-0.093993	-5.7504E-05	1.1697	0.00071562	611.7895808994355	22.398	0.42379	22.398	22.183	22.607	0	-0.22435	0.00063385	NaN	21.747	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225000	+		4234	10263	2093	2106							-0.03781910537509248
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	611.789327	1221.5641	0.60693	0.00037132	0.083166	5.088E-05	0.6901	0.0004222	611.7897182747251	22.372	0.20458	22.595	22.436	22.641	0.223	-0.027113	0.00085061	NaN	21.747	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	933770	+		4235	10263	2093	2106							-0.03781910537509248
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	611.789327	1221.5641	0.90878	0.00055598	-1.8776	-0.0011487	-0.96885	-0.00059273	611.788347342889	21.549	0.18261	22.726	22.597	22.78	1.177	0.10319	-0.0015486	NaN	21.747	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477150	+		4236	10263	2093	2106							-0.03781910537509248
ELVFMHWNF	9	Unmodified	_ELVFMHWNF_					0	0	0			REV__ENSG00000144821|ENST00000693548|MYH15	REV__ENSG00000144821|ENST00000693548|MYH15	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	611.789327	1221.5641	0.412	0.00025206	-1.1472	-0.00070182	-0.73516	-0.00044976	611.789218006481	21.196	0.17971	22.771	22.681	22.861	1.5748	0.14828	-0.00065478	NaN	21.747	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282990	+		4237	10263	2093	2106							-0.03781910537509248
ELVQHYQI	8	Unmodified	_ELVQHYQI_					0	0	0			REV__ENSG00000197386|ENST00000355072|HTT	REV__ENSG00000197386|ENST00000355072|HTT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.3145019412041	2	515.271824	1028.5291	4.0347	0.002079	3.0216	0.0015569	7.0563	0.0036359	515.772435918323	81.515	0.27705	83.211	83.106	83.383	1.6959					13	8	2	0	0	0	2.3239	1	34214	34214		12.532	6.7711	1	1281200	+		4238	11671	2094	2107	5083	5083					0.01597169926208153
ELVVFIVVAV	10	Unmodified	_ELVVFIVVAV_					0	0	0		ENSG00000170953|ENST00000306842|OR8B12	ENSG00000170953|ENST00000306842|OR8B12	ENSG00000170953|ENST00000306842|OR8B12	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2533752322197	3	363.230237	1086.66888	-0.051346	-1.865E-05	2.4143	0.00087696	2.363	0.00085831	363.564705631674	52.208	0.2566	53.604	53.395	53.652	1.3966					11	7	2	0	0	0	0.12559	1	21857	21857		0.77653	0	1	1204900			4239	4169	2095	2108	5084	5084					0.12901534210709542
ELWLWNVQENY	11	Unmodified	_ELWLWNVQENY_					0	0	0		ENST00000486652.5_1_1:224588736-224599215:-|nuORF	ENST00000486652.5_1_1:224588736-224599215:-|nuORF	ENST00000486652.5_1_1:224588736-224599215:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	746.8998290896416	2	747.356616	1492.69868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.45	1	98.677	98.177	99.177	0.22776								0	0	0	0.63775	1	41442	41442		2.9952	0	1				4240	6866	2096	2109	5085	5085					-0.02796178581888853
ELWRVRLI	8	Unmodified	_ELWRVRLI_					0	0	0			REV__ENST00000419807.5_3_2:44395715-44396385:+|nuORF	REV__ENST00000419807.5_3_2:44395715-44396385:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3358032107353	2	542.834926	1083.6553	2.6389	0.0014325	-0.98917	-0.00053696	1.6497	0.00089551	543.3355617058905	89.954	0.29032	90.163	89.985	90.275	0.20904					13	8	2	0	0	0	0.88504	1	37704	37704		5.7604	0	1	396080	+		4241	12969	2097	2110	5086	5086					0.11681721222134911
ELYRFKPVAFD	11	Unmodified	_ELYRFKPVAFD_					0	0	0			REV__ENST00000555815.5_1_15:25924490-25961922:-|nuORF	REV__ENST00000555815.5_1_15:25924490-25961922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	692.8697997927666	2	692.86662	1383.71869	2.4134	0.0016722	1.7412	0.0012064	4.1546	0.0028786	692.8680176434768	82.882	1.2611	82.882	82.585	83.846	0					129	40	6	0	0	0	0.66268	1	34544	34544		19.362	0	1	49312000	+		4242	11824	2098	2111	5087	5087					0.042176171486971725
ELYYKYSRLHN	11	Unmodified	_ELYYKYSRLHN_					0	0	0			REV__ENSG00000187021|ENST00000358834|PNLIPRP1	REV__ENSG00000187021|ENST00000358834|PNLIPRP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	743.3747436404228	2	743.377883	1484.74121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.615	1	99.812	99.312	100.31	0.19767								0	0	0	0.63774	1	41934	41934		7.1017	4.1065	1		+		4243	11524	2099	2112	5088	5088					0.018232165463359706
EMFMNWHK	8	Unmodified	_EMFMNWHK_					0	0	0		tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	375.5056640505791	3	374.833495	1121.47866	-1.6635	-0.00062354	2.209	0.00082801	0.5455	0.00020447	375.1682481540608	14.723	0.21636	14.723	14.596	14.812	0					9	6	2	0	0	0	2.3239	1	6122	6122		6.2058	1.6769	1	138330			4244	16377	2100	2113	5089	5089					-0.07722398994837931
EMKWKVRAEKE	11	Unmodified	_EMKWKVRAEKE_					0	0	0		ENSG00000177494|ENST00000317012|ZBED2	ENSG00000177494|ENST00000317012|ZBED2	ENSG00000177494|ENST00000317012|ZBED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	717.3826782107353	2	717.382111	1432.74967	0.49362	0.00035411	-1.5217	-0.0010916	-1.0281	-0.00073751	717.3813484900876	70.68	0.45254	72.518	72.319	72.772	1.8378					40	14	4	0	0	0	0.62604	1	29630	29630		20.415	2.0414	1	6799700			4245	4450	2101	2114	5090	5090					0.0506044719129477
EMLEFYGDRD	10	Unmodified	_EMLEFYGDRD_					0	0	0		ENST00000480065.1_1_1:222742724-222743894:-|nuORF;nc|ENSG00000143498|Q15573-2|TAF1A;ENSG00000143498|ENST00000352967|TAF1A	ENST00000480065.1_1_1:222742724-222743894:-|nuORF	ENST00000480065.1_1_1:222742724-222743894:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.7733642458916	2	637.771528	1273.5285	2.495	0.0015912	0.43189	0.00027545	2.9268	0.0018667	637.7718961328411	75.084	0.49417	76.39	76.182	76.677	1.3063					46	15	4	0	0	0	0.49886	3	31512	31466;31512;31555		27.629	10.516	1	12769000			4246	3038	2102	2115	5091;5092;5093	5092					-0.09732037575827235
EMLEFYGDRD	10	Unmodified	_EMLEFYGDRD_					0	0	0		ENST00000480065.1_1_1:222742724-222743894:-|nuORF;nc|ENSG00000143498|Q15573-2|TAF1A;ENSG00000143498|ENST00000352967|TAF1A	ENST00000480065.1_1_1:222742724-222743894:-|nuORF	ENST00000480065.1_1_1:222742724-222743894:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.7737304568291	2	637.771528	1273.5285	2.4926	0.0015897	0.49837	0.00031785	2.991	0.0019076	637.7717303730243	74.653	0.44361	76.435	76.195	76.638	1.7817					42	13	4	0	0	0	0.38174	3	31317	31271;31317;31360		34.402	4.5611	1	12103000			4247	3038	2102	2115	5094;5095;5096	5095					-0.09732037575827235
EMLYLILPELN	11	Unmodified	_EMLYLILPELN_					0	0	0			REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9135619997978	3	449.912468	1346.71558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.77605	1	1.4294	0.92936	1.9294	0.65331								0	0	0	0.63775	1	318	318		0	0	1		+		4248	13046	2103	2116	5097	5097					0.05608605979728054
EMRLWRPRHLR	11	Unmodified	_EMRLWRPRHLR_					0	0	0			REV__ENST00000257700.6_1_7:105172682-105177020:+|nuORF	REV__ENST00000257700.6_1_7:105172682-105177020:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	775.9384643435478	2	775.435878	1548.8572	1.7777	0.0013785	-0.81107	-0.00062893	0.96659	0.00074953	775.4351449342698	40.128	0.36972	41.438	41.207	41.577	1.3102					31	11	4	0	0	0	1.0372	1	16859	16859		0.96228	0	1	5985600	+		4249	12171	2104	2117	5098	5098					0.10472881636042075
EMSKEWFLF	9	Unmodified	_EMSKEWFLF_					0	0	0		nc|ENSG00000170185|Q8NB14-2|USP38;ENSG00000170185|ENST00000307017|USP38	nc|ENSG00000170185|Q8NB14-2|USP38	nc|ENSG00000170185|Q8NB14-2|USP38	MSMS	GG20161007_CRH_Patient100_W632_01	3	608.7883788943291	2	608.788992	1215.56343	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.172	1	77.466	76.966	77.966	1.2938								0	0	0	0.072403	1	31976	31976		39.95	5.8473	1				4250	4131	2105	2118	5099	5099					-0.035727499772292504
EMSKEWFLF	9	Unmodified	_EMSKEWFLF_					0	0	0		nc|ENSG00000170185|Q8NB14-2|USP38;ENSG00000170185|ENST00000307017|USP38	nc|ENSG00000170185|Q8NB14-2|USP38	nc|ENSG00000170185|Q8NB14-2|USP38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.7867309451103	2	608.788992	1215.56343	2.7151	0.0016529	-2.4852	-0.001513	0.22986	0.00013994	608.7868177578345	75.594	0.3582	77.375	77.135	77.493	1.7817					24	11	3	0	0	0	0.20671	1	31728	31728		32.305	13.049	1	1457000			4251	4131	2105	2118	5100	5100					-0.035727499772292504
EMVSDYYHK	9	Unmodified	_EMVSDYYHK_					0	0	0		tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2841979861259	3	391.174463	1170.50156	-0.019368	-7.5762E-06	-4.104	-0.0016054	-4.1233	-0.0016129	391.17406562645533	18.255	0.14041	19.234	19.172	19.312	0.97922					6	4	2	0	0	0	0.11909	1	7592	7592		2.4985	0	1	131630			4252	16648	2106	2119	5101	5101					-0.07687101396368234
ENDTIYWVDM	10	Unmodified	_ENDTIYWVDM_					0	0	0		ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.2758666872978	2	643.273903	1284.53325	1.3156	0.00084626	0.71917	0.00046263	2.0347	0.0013089	643.2743943621981	54.392	0.60524	55.797	55.485	56.09	1.4048					46	18	3	0	0	0	0.80702	1	22780	22780		11.495	0	1	3119600			4253	2188	2107	2120	5102	5102					-0.09763153433073057
ENDVRQTMNEF	11	Unmodified	_ENDVRQTMNEF_					0	0	0		tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	691.8015624880791	2	691.803891	1381.59323	1.0669	0.00073808	-3.7953	-0.0026256	-2.7284	-0.0018875	691.8014358842642	69.286	0.3147	71.139	70.948	71.262	1.853					22	9	3	0	0	0	0.58697	1	29061	29061		21.537	6.2885	1	1164200			4254	16396	2108	2121	5103	5103					-0.0823046276984769
ENDVRQTMNEF	11	Unmodified	_ENDVRQTMNEF_					0	0	0		tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	tr|A0A553SMW2|A0A553SMW2_NIACISignaltransductionhistidine-proteinkinaseArlSOS=NialliacirculansOX=1397GN=CEQ21_23290PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	691.803891	1381.59323	2.0805	0.0014393	-4.1089	-0.0028426	-2.0284	-0.0014033	691.8008193601702	69.683	0.31555	71.048	70.908	71.224	1.3657	-0.045138	-0.00030503	NaN	21.537	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1577800			4255	16396	2108	2121							-0.0823046276984769
ENECVCDEGF	10	Unmodified	_ENECVCDEGF_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	572.8428832888603	2	572.699714	1143.38487	1.8275	0.0010466	-1.1846	-0.00067841	0.64293	0.00036821	572.6984548517864	67.382	0.27937	68.759	68.603	68.882	1.3778					12	8	2	0	0	0	0.12539	1	28229	28229		4.3292	0	1	354350			4256	663	2109	2122	5104	5104					-0.18108207678415056
ENELLMETVWS	11	Unmodified	_ENELLMETVWS_					0	0	0			REV__ENSG00000134323|ENST00000281043|MYCN	REV__ENSG00000134323|ENST00000281043|MYCN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	675.8190795779228	2	675.815935	1349.61732	2.3229	0.0015698	1.0317	0.00069721	3.3545	0.0022671	675.816508165946	61.784	0.28254	63.741	63.625	63.908	1.9571					20	8	3	0	0	0	0.88359	1	25928	25928		10.8	0	1	1641500	+		4257	9901	2110	2123	5105	5105					-0.043506223361646335
ENELQPYNII	10	Unmodified	_ENELQPYNII_					0	0	0			REV__ENSG00000138246|ENST00000260818|DNAJC13	REV__ENSG00000138246|ENST00000260818|DNAJC13	MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8145629763603	2	616.81151	1231.60847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.431	1	43.324	42.824	43.824	1.8927								0	0	0	0.65926	1	17366	17366		5.7319	0	1		+		4258	10055	2111	2124	5106	5106					0.0019277208966741455
ENFCISLVE	9	Unmodified	_ENFCISLVE_					0	0	0			REV__ENSG00000154274|ENST00000381980|C4orf19	REV__ENSG00000154274|ENST00000381980|C4orf19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.8369323611259	3	351.835559	1052.48485	1.5768	0.00055479	0.065539	2.3059E-05	1.6424	0.00057785	351.8355826889976	65.438	0.35101	65.765	65.578	65.929	0.32689					17	10	2	0	0	0	0.49297	1	27409	27409		15.739	6.1946	1	672510	+		4259	10471	2112	2125	5107	5107					-0.03929602282300948
ENFCISLVE	9	Unmodified	_ENFCISLVE_					0	0	0			REV__ENSG00000154274|ENST00000381980|C4orf19	REV__ENSG00000154274|ENST00000381980|C4orf19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.8360778689384	3	351.835559	1052.48485	1.6475	0.00057964	0.89629	0.00031535	2.5438	0.00089499	351.8358072354528	64.22	0.43121	65.627	65.433	65.865	1.4071					23	13	2	0	0	0	0.49297	1	26933	26933		15.739	6.1946	1	2422000	+		4260	10471	2112	2125	5108	5108					-0.03929602282300948
ENFCISLVE	9	Unmodified	_ENFCISLVE_					0	0	0			REV__ENSG00000154274|ENST00000381980|C4orf19	REV__ENSG00000154274|ENST00000381980|C4orf19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.8363525271416	3	351.835559	1052.48485	2.477	0.00087151	-0.407	-0.0001432	2.07	0.00072831	351.83546391097593	63.792	0.46317	65.72	65.425	65.888	1.928					34	14	3	0	0	0	0.28863	1	26763	26763		26.021	8.5781	1	2052900	+		4261	10471	2112	2125	5109	5109					-0.03929602282300948
ENIMFLEL	8	Unmodified	_ENIMFLEL_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.506518542767	1	1008.50705	1007.49977	2.742	0.0027653	-2.9114	-0.0029362	-0.16943	-0.00017087	1008.5031208464966	81.003	0.4663	82.699	82.425	82.892	1.6959					33	14	3	0	0	0	0.60369	1	33985	33985		39.95	1.9757	1	2101100			4262	1055	2113	2126	5110	5110					-0.0036811041431974445
ENIQSLNAAYA	11	Unmodified	_ENIQSLNAAYA_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000082805|Q8IUD2-2|ERC1;nc|ENSG00000082805|Q8IUD2-4|ERC1;nc|ENSG00000082805|Q8IUD2-5|ERC1;ENSG00000187672|ENST00000288221|ERC2;nc|ENSG00000082805|Q8IUD2-3|ERC1;ENSG00000082805|ENST00000360905|ERC1	ERC1-CACNA1C|37|fusion;ENSG00000187672|ENST00000288221|ERC2;nc|ENSG00000082805|Q8IUD2-3|ERC1	ERC1-CACNA1C|37|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2972900271416	2	597.293485	1192.57242	3.1822	0.0019007	3.3439	0.0019973	6.526	0.003898	597.295519816167	62.28	0.54612	64.237	63.999	64.545	1.9571					52	17	4	0	0	0	0.17708	1	26180	26180		41.956	0	1	33699000			4263	7578;7833;4833	2114	2127	5111	5111					-0.016166850871968563
ENKLFRIHRMM	11	Unmodified	_ENKLFRIHRMM_					0	0	0			REV__ENSG00000108091|ENST00000263102|CCDC6	REV__ENSG00000108091|ENST00000263102|CCDC6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.9305908083916	3	492.263841	1473.76969	2.2398	0.0011026	0.076202	3.7512E-05	2.316	0.0011401	492.2639451344013	41.49	0.35429	42.816	42.619	42.973	1.3254					17	10	2	0	0	0	0.14606	1	17383	17383		0.92553	0.41958	1	1300400	+		4264	9247	2115	2128	5112	5112					0.0517591965021893
ENKMWYIHTYH	11	Unmodified	_ENKMWYIHTYH_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|64|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|64|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|64|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	760.7606078982353	2	761.350811	1520.68707	2.7783	0.0021152	1.7636	0.0013427	4.5418	0.0034579	761.8519433088229	94.963	0.12514	96.152	96.1	96.226	1.1887					5	4	2	0	0	0	0.14606	1	39975	39975		4.897	3.5675	1	412760			4265	7703	2116	2129	5113	5113					-0.05244698876890652
ENKQPANPHQK	11	Unmodified	_ENKQPANPHQK_					0	0	0		ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890258669853	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.018	1	25.018	24.518	25.518	0								0	0	0	0.63775	1	10439	10439		1.2148	0.25256	1				4266	3808	2117	2130	5114	5114					0.014409171638817497
ENLAMSSTSLI	11	Unmodified	_ENLAMSSTSLI_					0	0	0			REV__ENST00000427077.1_1_2:102957780-102959889:+|nuORF	REV__ENST00000427077.1_1_2:102957780-102959889:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.2985107302666	2	583.292096	1164.56964	1.2665	0.00073873	-3.1519	-0.0018385	-1.8854	-0.0010998	583.2908946784978	58.611	0.535	60.029	59.845	60.38	1.4181					30	16	3	0	0	0	0.34699	1	24694	24694		28.495	4.7047	1	3647900	+		4267	13002	2118	2131	5115	5115					-0.006062765363367362
ENLLLDGNMDI	11	Unmodified	_ENLLLDGNMDI_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.8025390505791	2	623.802828	1245.5911	2.5119	0.0015669	-2.9484	-0.0018392	-0.43645	-0.00027226	623.8007535286174	79.095	0.40608	80.362	80.224	80.63	1.2668					35	12	4	0	0	0	0.85967	1	33234	33234		12.241	0	1	5926900			4268	2986	2119	2132	5116	5116					-0.02186891507631117
ENLMEPPSI	9	Unmodified	_ENLMEPPSI_					0	0	0			REV__tr|A0A553SNY6|A0A553SNY6_NIACIFlagellarmotorswitchphosphataseFliYOS=NialliacirculansOX=1397GN=fliYPE=3SV=1	REV__tr|A0A553SNY6|A0A553SNY6_NIACIFlagellarmotorswitchphosphataseFliYOS=NialliacirculansOX=1397GN=fliYPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	343.1715576052666	3	343.835559	1028.48485	0.69405	0.00023864	2.9946	0.0010297	3.6887	0.0012683	343.8366036420293	69.14	0.29451	70.506	70.35	70.645	1.3657					15	9	2	0	0	0	0.11719	1	29001	29001		4.5289	1.7937	1	890920	+		4269	15068	2120	2133	5117	5117					-0.028256022823143212
ENLTLYNHDR	10	Unmodified	_ENLTLYNHDR_					0	0	0			REV__ENST00000451174.1_3_14:45716562-45719308:-|nuORF	REV__ENST00000451174.1_3_14:45716562-45719308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	637.8129760622978	2	637.809833	1273.60511	2.0483	0.0013064	2.5557	0.00163	4.6039	0.0029364	637.8113471631638	79.264	1.3207	79.264	78.597	79.918	0					101	42	4	0	0	0	0.8882	1	32839	32839		2.7352	0	1	1102000	+		4270	13135	2121	2134	5118	5118					-0.020744779643337097
ENRLHDIMRL	10	Unmodified	_ENRLHDIMRL_					0	0	0			REV__tr|A0A553SJC5|A0A553SJC5_NIACIAspartyl-phosphatephosphataseSpo0EfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16550PE=4SV=1	REV__tr|A0A553SJC5|A0A553SJC5_NIACIAspartyl-phosphatephosphataseSpo0EfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16550PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2336608767509	3	432.899556	1295.67684	1.5797	0.00068384	1.0011	0.00043336	2.5807	0.0011172	432.90023579439526	39.257	0.77197	41.094	40.817	41.589	1.8366					75	24	5	0	0	0	0.55727	1	16554	16554		24.957	3.3669	1	25361000	+		4271	14895	2122	2135	5119	5119					0.04082738188526491
ENRLIHRLKKR	11	Unmodified	_ENRLIHRLKKR_					0	0	0		ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	ENST00000575042.1_1_16:3493766-3500111:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.4830200076103	4	366.482389	1461.90045	0.47832	0.0001753	0.33952	0.00012443	0.81785	0.00029973	366.4822138213504	30.25	0.6519	32.065	31.8	32.452	1.8151					49	20	3	0	0	0	1.0402	1	12790	12790		0.094841	0.011491	1	752550			4272	7408	2123	2136	5120	5120					0.1879739468495245
ENTTRYINI	9	Unmodified	_ENTTRYINI_					0	0	0			REV__tr|A0A7D6VZY5|A0A7D6VZY5_9CLOTMagnesiumtransporterCorAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21860PE=3SV=1	REV__tr|A0A7D6VZY5|A0A7D6VZY5_9CLOTMagnesiumtransporterCorAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21860PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.8196288943291	2	562.290745	1122.56694	0.75497	0.00042451	1.4927	0.00083936	2.2477	0.0012639	562.2912097708531	53.217	0.30049	54.618	54.41	54.711	1.4005					15	9	2	0	0	0	0.11275	1	22200	22200		14.838	0	1	4141600	+		4273	15573	2124	2137	5121	5121					0.010556361209864917
ENVYFYRRHDR	11	Unmodified	_ENVYFYRRHDR_					0	0	0			REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	778.3821899294853	2	777.881656	1553.74876	0.28784	0.0002239	-2.3117	-0.0017982	-2.0239	-0.0015743	777.8800066967191	27.461	0.27876	29.237	29.047	29.326	1.7754					23	8	4	0	0	0	1.0362	1	11463	11463		1.3295	0	1	1653200	+		4274	9285	2125	2138	5122	5122					-0.005966311334077545
ENWFVLKIY	9	Unmodified	_ENWFVLKIY_					0	0	0		tr|A0A553SIE7|A0A553SIE7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_14715PE=4SV=1	tr|A0A553SIE7|A0A553SIE7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_14715PE=4SV=1	tr|A0A553SIE7|A0A553SIE7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_14715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.8876525759697	3	404.553492	1210.63865	0.3194	0.00012921	-0.87648	-0.00035458	-0.55708	-0.00022537	404.5526943347639	66.384	0.51506	66.384	66.156	66.671	0					28	15	2	0	0	0	0.70577	1	27658	27658		7.1017	0.47135	1	931870			4275	16191	2126	2139	5123	5123					0.041751755455152306
ENYEFIQVKA	10	Unmodified	_ENYEFIQVKA_					0	0	0			REV__nc|ENSG00000085415|Q96EE3|SEH1L	REV__nc|ENSG00000085415|Q96EE3|SEH1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	620.3135253787041	2	620.814053	1239.61355	2.1563	0.0013387	-1.1088	-0.00068839	1.0474	0.00065026	620.8132413388817	59.121	0.28508	61.09	60.908	61.193	1.969					13	8	2	0	0	0	0.12488	1	24784	24784		8.1555	0	1	1551100	+		4276	8850	2127	2140	5124	5124					0.0033307595226688136
EPAADIQDY	9	Unmodified	_EPAADIQDY_					0	0	0			REV__tr|A0A553SHA6|A0A553SHA6_NIACIElongationfactorTuOS=NialliacirculansOX=1397GN=tufPE=3SV=1	REV__tr|A0A553SHA6|A0A553SHA6_NIACIElongationfactorTuOS=NialliacirculansOX=1397GN=tufPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	511.2643310427666	2	511.227279	1020.44001	2.0239	0.0010347	-3.7034	-0.0018933	-1.6795	-0.0008586	511.22527789145295	66.723	0.28117	67.048	66.939	67.22	0.32449					12	8	2	0	0	0	0.095205	1	27960	27960		19.257	0	1	593510	+		4277	14785	2128	2141	5125	5125					-0.06939709824007423
EPAFEDITL	9	Unmodified	_EPAFEDITL_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.498095691204	1	1034.50407	1033.49679	1.1275	0.0011664	-4.4046	-0.0045565	-3.2771	-0.0033901	1034.4989535676596	66.978	0.37263	68.367	68.184	68.557	1.3887					18	11	2	0	0	0	0.12174	1	28128	28128		42.095	20.348	1	838620			4278	4943	2129	2142	5126	5126					-0.018616622674926475
EPARELCAC	9	Unmodified	_EPARELCAC_					0	0	0			REV__ENST00000598607.1_3_19:6393018-6393985:-|nuORF	REV__ENST00000598607.1_3_19:6393018-6393985:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.1497375369072	3	331.149372	990.426286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.01	1	98.101	97.601	98.601	0.090881								0	0	0	0.42693	1	41010	41010		1.1933	0	1		+		4279	14108	2130	2143	5127	5127					-0.06930982128449159
EPCALYQSWSK	11	Unmodified	_EPCALYQSWSK_					0	0	0			REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.8717529177666	3	437.872784	1310.59652	0.01737	7.606E-06	-1.7595	-0.00077042	-1.7421	-0.00076282	437.8720873204395	12.142	0.21642	12.142	12.003	12.22	0					22	6	5	0	0	0	0.90077	1	5014	5014		9.7643	0.52048	1	15511000	+		4280	9723	2131	2144	5128	5128					-0.04635167925175665
EPCALYQSWSK	11	Unmodified	_EPCALYQSWSK_					0	0	0			REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	437.872784	1310.59652	0.01737	7.606E-06	-1.7595	-0.00077042	-1.7421	-0.00076282	437.8720873204395	12.142	0.21642	12.142	12.003	12.22	0	-0.07489	0.00056196	NaN	9.7643	22	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15511000	+		4281	9723	2131	2144							-0.04635167925175665
EPCALYQSWSK	11	Unmodified	_EPCALYQSWSK_					0	0	0			REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	REV__HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	437.872784	1310.59652	0.59532	0.00026068	-2.8144	-0.0012323	-2.2191	-0.00097167	437.8713697905558	12.202	0.25276	12.291	12.118	12.371	0.089381	0.07489	-0.00082381	NaN	9.7643	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1728600	+		4282	9723	2131	2144							-0.04635167925175665
EPDAVHVVL	9	Unmodified	_EPDAVHVVL_					0	0	0		ENST00000533960.1_1_11:770991-771360:-|nuORF;ENST00000530209.5_1_11:770899-772585:-|nuORF;ENST00000534603.5_1_11:770899-773566:-|nuORF;nc|ENSG00000177225|Q8NB37-3|GATD1;ENSG00000177225|ENST00000319863|GATD1	ENST00000533960.1_1_11:770991-771360:-|nuORF	ENST00000533960.1_1_11:770991-771360:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7671996951103	2	489.766374	977.518196	2.3726	0.001162	-1.7825	-0.00087301	0.59006	0.00028899	489.76578439443716	39.494	0.59127	40.805	40.586	41.177	1.3102					40	19	3	0	0	0	0.20838	1	16569	16569		32.117	5.7757	1	4847900			4283	4441	2132	2145	5129	5129					0.028537675519032746
EPDDGDDD	8	Unmodified	_EPDDGDDD_					0	0	0			REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	REV__ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	439.1384155154228	2	439.138327	876.262101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.71	1	101.78	101.28	102.28	0.067009								0	0	0	1.0178	1	42585	42585		0.69038	0	1		+		4284	9209	2133	2146	5130	5130					-0.18098004813839452
EPDMLTSITF	10	Unmodified	_EPDMLTSITF_					0	0	0			REV__ENSG00000188585|ENST00000623247|CLEC20A	REV__ENSG00000188585|ENST00000623247|CLEC20A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	576.8127319216728	2	577.275915	1152.53728	2.8731	0.0016586	-1.1082	-0.00063974	1.7649	0.0010188	577.2748388243547	63.023	0.21753	64.436	64.284	64.502	1.4134					9	6	2	0	0	0	0.12471	1	26450	26450		13.906	0	1	441440	+		4285	11576	2134	2147	5131	5131					-0.03289063939382686
EPDMLTSITF	10	Unmodified	_EPDMLTSITF_					0	0	0			REV__ENSG00000188585|ENST00000623247|CLEC20A	REV__ENSG00000188585|ENST00000623247|CLEC20A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	577.275915	1152.53728	2.9891	0.0017255	-3.5934	-0.0020744	-0.60431	-0.00034886	577.775666361625	62.417	0.18364	64.374	64.267	64.451	1.9571	-0.031103	-0.0015053	NaN	13.906	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522840	+		4286	11576	2134	2147							-0.03289063939382686
EPEPFLRLAL	10	Unmodified	_EPEPFLRLAL_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8366577029228	2	592.837331	1183.66011	2.0011	0.0011863	0.74586	0.00044218	2.747	0.0016285	592.837884053337	71.953	0.31339	73.295	73.153	73.467	1.3415					16	9	2	0	0	0	0.38174	1	30207	30207		34.402	13.948	1	1368900			4287	758	2135	2148	5132	5132					0.0756256057425162
EPEPFLRLAL	10	Unmodified	_EPEPFLRLAL_					0	0	0		ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	ENSG00000062822|ENST00000440232|POLD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	592.837331	1183.66011	1.8865	0.0011184	-1.5851	-0.00093972	0.30139	0.00017868	592.8360790998154	71.51	0.3471	73.334	73.098	73.445	1.824	0.019507	-0.0011817	NaN	34.402	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1060900			4288	758	2135	2148							0.0756256057425162
EPEPNHRYRV	10	Unmodified	_EPEPNHRYRV_					0	0	0		ENST00000520674.5_1_5:141017057-141017459:+|nuORF	ENST00000520674.5_1_5:141017057-141017459:+|nuORF	ENST00000520674.5_1_5:141017057-141017459:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.8851501345634	3	432.886304	1295.63708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5187	1	9.1552	8.6552	9.6552	0.63651								0	0	0	0.66255	1	3534	3534		0.13989	0	1				4289	7079	2136	2149	5133	5133					0.0010893450944422511
EPEPSDPC	8	Unmodified	_EPEPSDPC_					0	0	0		ENSG00000144649|ENST00000430121|GASK1A;ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENSG00000144649|ENST00000430121|GASK1A	ENSG00000144649|ENST00000430121|GASK1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.1683532595634	2	437.168376	872.322198	0.091658	4.007E-05	-0.73499	-0.00032131	-0.64333	-0.00028124	437.1681303492302	14.257	0.86474	14.257	13.762	14.627	0					53	27	3	0	0	0	0.88055	2	5898	5898;5967		8.5933	3.3626	1	1701000			4290	3086	2137	2150	5134;5135	5134					-0.11906985684311167
EPEPSDPC	8	Unmodified	_EPEPSDPC_					0	0	0		ENSG00000144649|ENST00000430121|GASK1A;ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENSG00000144649|ENST00000430121|GASK1A	ENSG00000144649|ENST00000430121|GASK1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.1678039431572	2	437.168376	872.322198	0.69931	0.00030572	-1.9981	-0.00087353	-1.2988	-0.00056781	437.16748808994373	14.272	1.059	14.385	13.762	14.821	0.11295					48	33	2	0	0	0	0.88055	2	5934	5885;5934		8.5933	3.3626	1	790430			4291	3086	2137	2150	5136;5137	5137					-0.11906985684311167
EPEPSDPC	8	Unmodified	_EPEPSDPC_					0	0	0		ENSG00000144649|ENST00000430121|GASK1A;ENST00000434206.1_1_3:43020805-43095327:+|nuORF	ENSG00000144649|ENST00000430121|GASK1A	ENSG00000144649|ENST00000430121|GASK1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.1677123904228	2	437.168376	872.322198	0.19571	8.5556E-05	-0.88979	-0.00038899	-0.69408	-0.00030343	437.167888590219	13.802	0.50931	14.528	14.38	14.889	0.72639					23	17	2	0	0	0	0.88663	1	5748	5748		4.756	2.4533	1	548040			4292	3086	2137	2150	5138	5138					-0.11906985684311167
EPEQFVVVM	9	Unmodified	_EPEQFVVVM_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2702514529228	2	539.267893	1076.52123	3.0727	0.001657	1.4719	0.00079377	4.5447	0.0024508	539.2685960402409	62.819	0.45572	64.232	64.016	64.471	1.4134					40	14	4	0	0	0	0.098163	2	26369	26322;26369		49.933	30.676	1	4206800			4293	2893	2138	2151	5139;5140	5140					-0.013967253855980744
EPEQFVVVM	9	Unmodified	_EPEQFVVVM_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2702514529228	2	539.267893	1076.52123	3.2117	0.001732	-0.015899	-8.574E-06	3.1958	0.0017234	539.2679395026028	62.284	0.42038	64.241	64.061	64.482	1.9571					33	13	3	0	0	0	0.098163	3	26158	26110;26158;26215		49.933	19.296	1	3386700			4294	2893	2138	2151	5141;5142;5143	5142					-0.013967253855980744
EPESILQVL	9	Unmodified	_EPESILQVL_					0	0	0		nc|ENSG00000120053|P17174-2|GOT1;ENSG00000120053|ENST00000370508|GOT1	nc|ENSG00000120053|P17174-2|GOT1	nc|ENSG00000120053|P17174-2|GOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2896606326103	2	514.28714	1026.55973	2.5176	0.0012948	-0.027013	-1.3892E-05	2.4906	0.0012809	514.2871003813146	76.725	0.51409	78.493	78.222	78.736	1.7672					40	15	3	0	0	0	0.21592	1	32246	32246		42.095	6.0504	1	4415400			4295	2095	2139	2152	5144	5144					0.04750903520562133
EPFQDEYEK	9	Unmodified	_EPFQDEYEK_					0	0	0			REV__tr|A0A553SKD7|A0A553SKD7_NIACIATP-dependentRecD2DNAhelicaseOS=NialliacirculansOX=1397GN=recD2PE=3SV=1	REV__tr|A0A553SKD7|A0A553SKD7_NIACIATP-dependentRecD2DNAhelicaseOS=NialliacirculansOX=1397GN=recD2PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	394.8407775759697	3	395.508388	1183.50333	-1.2219	-0.00048326	2.8745	0.0011369	1.6526	0.00065362	395.50944475745223	11.487	0.30942	11.487	11.325	11.635	0					14	9	2	0	0	0	0.11716	1	4758	4758		4.897	0.36815	1	526820	+		4296	14950	2140	2153	5145	5145					-0.08107769106777596
EPFVWHEKD	9	Unmodified	_EPFVWHEKD_					0	0	0			REV__tr|A0A7D6VNN1|A0A7D6VNN1_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_18565PE=4SV=1	REV__tr|A0A7D6VNN1|A0A7D6VNN1_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_18565PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	396.8454467654228	3	396.189101	1185.54547	-1.0761	-0.00042635	2.4608	0.00097494	1.3847	0.00054859	396.1901659856423	14.302	0.2807	14.302	14.131	14.412	0					14	8	2	0	0	0	0.11789	1	5966	5966		3.8763	0	1	1664800	+		4297	15340	2141	2154	5146	5146					-0.039877489077071004
EPGIILPKP	9	Unmodified	_EPGIILPKP_					0	0	0			REV__nc|ENSG00000132694|O15085|ARHGEF11	REV__nc|ENSG00000132694|O15085|ARHGEF11	MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2985107302666	2	482.29731	962.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.485	1	97.787	97.287	98.287	0.3023								0	0	0	0.42693	1	41009	41009		1.8442	0	1		+		4298	9857	2142	2155	5147	5147					0.09728118971042932
EPGKARYNEAR	11	Unmodified	_EPGKARYNEAR_					0	0	0			REV__ENST00000317506.7_1_16:67759547-67759589:-|nuORF	REV__ENST00000317506.7_1_16:67759547-67759589:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.823	1	22.823	22.323	23.323	0								0	0	0	0.63775	1	9505	9505		1.1098	0.33322	1		+		4299	12393	2143	2156	5148	5148					0.014409171639044871
EPIETLRIKHW	11	Unmodified	_EPIETLRIKHW_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	474.2340576052666	3	474.601504	1420.78268	1.8509	0.00087846	-1.6479	-0.00078211	0.20302	9.6352E-05	474.60079070063813	29.322	0.42299	29.602	29.35	29.773	0.2793					31	13	3	0	0	0	0.14606	1	12241	12241		0.094841	0	1	977490			4300	1088	2144	2157	5149	5149					0.0891239730565303
EPIIKLKKRIP	11	Unmodified	_EPIIKLKKRIP_					0	0	0			REV__ENSG00000121064|ENST00000262288|SCPEP1	REV__ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4800598025322	4	334.477512	1333.88094	0.1223	4.0905E-05	3.3575	0.001123	3.4798	0.0011639	334.4789065153543	24.857	2.539	26.098	25.331	27.871	1.241					289	82	6	0	0	0	1.039	1	10263	10263		0.45452	0.37117	1	178320000	+		4301	9583	2145	2158	5150	5150					0.22735625621498912
EPIIKLKKRIP	11	Unmodified	_EPIIKLKKRIP_					0	0	0			REV__ENSG00000121064|ENST00000262288|SCPEP1	REV__ENSG00000121064|ENST00000262288|SCPEP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4784118533134	4	334.477512	1333.88094	0.06351	2.1243E-05	2.206	0.00073787	2.2695	0.00075911	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	3	10356	10356;10395;10437		0.094841	0.094841	1	234860000	+		4302	9583	2145	2158	5151;5152;5153	5151					0.22735625621498912
EPIPRLGQR	9	Unmodified	_EPIPRLGQR_					0	0	0			REV__NBN|p.P357Vfs*7|1|0.03|ENSG00000104320|chr8:89958781-89958782|-/AATCTAATGCTACC|frameshift_variant	REV__NBN|p.P357Vfs*7|1|0.03|ENSG00000104320|chr8:89958781-89958782|-/AATCTAATGCTACC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1916992068291	2	533.311815	1064.60908	2.3997	0.0012798	3.0874	0.0016465	5.4871	0.0029263	534.317529910013	39.506	0.19484	40.817	40.682	40.877	1.3102					13	6	3	0	0	0	0.11719	1	16555	16555		1.6526	0	1	638140	+		4303	9134	2146	2159	5154	5154					0.07935656320046292
EPIVFLQQMQ	10	Unmodified	_EPIVFLQQMQ_					0	0	0		TRIM13|p.L317Ffs*26|1|0.08|ENSG00000204977|chr13:50012890-50012891|-/C|frameshift_variant;ENSG00000204977|ENST00000378182|TRIM13;nc|ENSG00000204977|O60858-3|TRIM13	TRIM13|p.L317Ffs*26|1|0.08|ENSG00000204977|chr13:50012890-50012891|-/C|frameshift_variant	TRIM13|p.L317Ffs*26|1|0.08|ENSG00000204977|chr13:50012890-50012891|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8259765505791	2	616.820824	1231.62709	3.6692	0.0022632	0.59481	0.00036689	4.264	0.0026301	616.821055565209	96.196	0.1863	96.618	96.509	96.695	0.4212					14	5	4	0	0	0	0.78468	1	40473	40473		13.906	0	1	6882700			4304	5170	2147	2160	5155	5155					0.020546104598906823
EPKSVFSM	8	Unmodified	_EPKSVFSM_					0	0	0			REV__ENSG00000100154|ENST00000397906|TTC28	REV__ENSG00000100154|ENST00000397906|TTC28	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1461669802666	2	462.728403	923.442254	1.7223	0.00079697	-3.0749	-0.0014228	-1.3526	-0.00062587	462.7270878460681	28.913	0.27533	29.192	29.075	29.35	0.27929					14	8	2	0	0	0	2.3239	1	12112	12112		0	0	1	425580	+		4305	8970	2148	2161	5156	5156					-0.02252952619869575
EPLDEDDDL	9	Unmodified	_EPLDEDDDL_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2219116091728	2	530.719484	1059.42441	0.92285	0.00048978	0.15345	8.144E-05	1.0763	0.00057122	531.2211182499645	55.706	0.16175	57.675	57.618	57.78	1.9684					10	5	2	0	0	0	0.68551	1	23361	23361		7.9102	0	1	3303800	+		4306	8912	2149	2162	5157	5157					-0.10292041131719998
EPLDEDDDL	9	Unmodified	_EPLDEDDDL_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	530.719484	1059.42441	0.28096	0.00014911	0.0040604	2.1549E-06	0.28502	0.00015127	530.7193876193955	56.192	0.22623	57.602	57.522	57.748	1.4099	-0.036268	-8.3409E-05	NaN	7.9102	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3493300	+		4307	8912	2149	2162							-0.10292041131719998
EPLDEDDDL	9	Unmodified	_EPLDEDDDL_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	530.719484	1059.42441	0.92285	0.00048978	0.15345	8.144E-05	1.0763	0.00057122	531.2211182499645	55.706	0.16175	57.675	57.618	57.78	1.9684	0.036268	7.516E-05	NaN	7.9102	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3303800	+		4308	8912	2149	2162							-0.10292041131719998
EPLIYPILD	9	Unmodified	_EPLIYPILD_					0	0	0			REV__tr|A0A7D6VPQ3|A0A7D6VPQ3_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19685PE=4SV=1	REV__tr|A0A7D6VPQ3|A0A7D6VPQ3_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19685PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	537.2463256716728	2	536.799883	1071.58521	2.5046	0.0013445	-3.6154	-0.0019407	-1.1108	-0.00059627	536.7982894060688	75.46	0.24718	75.782	75.678	75.925	0.32164					10	7	2	0	0	0	0.11568	1	31618	31618		6.7232	1.9672	1	301030	+		4309	15361	2150	2163	5158	5158					0.05228378042988879
EPLSLQIVQF	10	Unmodified	_EPLSLQIVQF_					0	0	0			REV__nc|ENSG00000168843|Q8N475-3|FSTL5	REV__nc|ENSG00000168843|Q8N475-3|FSTL5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	392.2880126833916	3	391.888651	1172.64412	0.43811	0.00017169	3.375	0.0013226	3.8132	0.0014943	391.88970785994206	28.106	0.26945	29.385	29.276	29.545	1.2789					13	8	2	0	0	0	0.12556	1	11813	11813		1.9064	0.71303	1	324770	+		4310	10923	2151	2164	5159	5159					0.06470854337317178
EPLVFYLYI	9	Unmodified	_EPLVFYLYI_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.8170654177666	2	578.818076	1155.6216	2.5379	0.001469	-2.7511	-0.0015924	-0.21319	-0.0001234	578.8164466914308	91.58	0.355	91.771	91.562	91.917	0.19042					24	10	3	0	0	0	0.75267	1	38376	38376		5.2307	1.6342	1	1017500	+		4311	9276	2152	2165	5160	5160					0.05001254939725186
EPMGGRPFGL	10	Unmodified	_EPMGGRPFGL_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7640869021416	2	530.765852	1059.51715	1.6434	0.00087224	-0.92303	-0.00048991	0.72033	0.00038233	530.7656134240655	42.945	0.37525	44.285	44.14	44.515	1.3399					20	11	2	0	0	0	0.47063	2	17983	17983;18035		29.082	19.734	1	985570			4312	2242	2153	2166	5161;5162	5161					-0.01022770088661673
EPMGGRPFGL	10	Unmodified	_EPMGGRPFGL_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7659179568291	2	530.765852	1059.51715	1.9372	0.0010282	-1.1108	-0.00058958	0.82642	0.00043864	530.764946095461	42.352	0.49868	44.273	44.133	44.632	1.9211					22	15	2	0	0	0	0.32206	2	17718	17718;17774		37.974	19.839	1	1223600			4313	2242	2153	2166	5163;5164	5163					-0.01022770088661673
EPNNIVVLL	9	Unmodified	_EPNNIVVLL_					0	0	0		ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.8003112673759	2	505.797675	1009.5808	2.3316	0.0011793	-0.62817	-0.00031773	1.7034	0.00086159	505.79899367324975	71.773	0.27925	73.597	73.476	73.755	1.8239					15	8	3	0	0	0	0.10473	1	30128	30128		47.749	1.7277	1	1032000			4314	2944	2154	2167	5165	5165					0.07638913620110088
EPNNIVVLL	9	Unmodified	_EPNNIVVLL_					0	0	0		ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	505.797675	1009.5808	2.7799	0.0014061	0.29153	0.00014745	3.0714	0.0015535	505.79802627037844	72.288	0.33694	73.617	73.455	73.792	1.3297	0.010315	0.00036837	NaN	47.749	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1135300			4315	2944	2154	2167							0.07638913620110088
EPPLVTVP	8	Unmodified	_EPPLVTVP_					0	0	0			REV__nc|ENSG00000100918|O95072-2|REC8	REV__nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.2469360232353	2	426.247286	850.48002	2.0477	0.00087281	-1.2467	-0.0005314	0.80097	0.00034141	426.24625504032775	67.878	0.42706	69.256	69.096	69.523	1.3778					32	13	3	0	0	0	0.89051	1	28528	28528		2.3027	0	1	7235700	+		4316	9014	2155	2168	5166	5166					0.048798816372254805
EPRRKGHR	8	Unmodified	_EPRRKGHR_					0	0	0			REV__ENSG00000160469|ENST00000309383|BRSK1	REV__ENSG00000160469|ENST00000309383|BRSK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	518.0923339724541	2	518.299573	1034.58459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.16	1	100.37	99.866	100.87	0.20527								0	0	0	1.0178	1	42123	42123		2.3027	0.4585	1		+		4317	10604	2156	2169	5167	5167					0.06868440957168787
EPSHPRKG	8	Unmodified	_EPSHPRKG_					0	0	0			REV__nc|ENSG00000074356|Q53F19-2|NCBP3	REV__nc|ENSG00000074356|Q53F19-2|NCBP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	907.9827758669853	1	907.47444	906.467164	1.9136	0.0017366	-0.096018	-8.7134E-05	1.8176	0.0016494	907.4743105674225	48.376	0.26988	48.376	48.254	48.524	0					11	8	2	0	0	0	2.3239	1	20220	20220		18.135	4.6271	1	289960	+		4318	8749	2157	2170	5168	5168					0.010188632977133238
EPSHPRKG	8	Unmodified	_EPSHPRKG_					0	0	0			REV__nc|ENSG00000074356|Q53F19-2|NCBP3	REV__nc|ENSG00000074356|Q53F19-2|NCBP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	907.9809448122978	1	907.47444	906.467164	1.6115	0.0014624	2.5665	0.0023291	4.178	0.0037914	907.4765720860069	46.746	0.31817	48.128	47.995	48.314	1.3825					14	9	2	0	0	0	2.3239	1	19564	19564		18.135	0	1	692990	+		4319	8749	2157	2170	5169	5169					0.010188632977133238
EPSLTYVSM	9	Unmodified	_EPSLTYVSM_					0	0	0			REV__ENST00000460583.1_1_1:147119227-147122061:-|nuORF	REV__ENST00000460583.1_1_1:147119227-147122061:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.2885619997978	2	513.74425	1025.47395	2.629	0.0013507	-0.57293	-0.00029434	2.0561	0.0010563	513.7423903631301	76.625	0.48126	78.392	78.222	78.704	1.7672					21	14	2	0	0	0	0.08828	1	32139	32139		28.487	0	1	395840	+		4320	10667	2158	2171	5170	5170					-0.03777004656603822
EPSPAWGK	8	Unmodified	_EPSPAWGK_					0	0	0			REV__ENST00000470100.1_1_2:96072692-96076397:+|nuORF	REV__ENST00000470100.1_1_2:96072692-96076397:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	436.8365966677666	2	436.21906	870.423567	-0.031642	-1.3803E-05	2.197	0.00095838	2.1654	0.00094458	436.220222952231	12.173	0.27927	12.173	12.003	12.283	0					12	8	2	0	0	0	2.3239	1	4968	4968		8.5933	6.0158	1	778640	+		4321	13275	2159	2172	5171	5171					-0.016827461994353143
EPSPVLLSPLR	11	Unmodified	_EPSPVLLSPLR_					0	0	0			REV__ENST00000529829.5_1_11:10562928-10615679:+|nuORF	REV__ENST00000529829.5_1_11:10562928-10615679:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.3577148318291	2	604.355888	1206.69722	2.9898	0.0018069	-0.10974	-6.6321E-05	2.88	0.0017406	604.3560061354474	87.189	0.82157	87.189	86.612	87.434	0					153	33	5	0	0	0	1.0366	1	36266	36266		1.1933	0.59184	1	97432000	+		4322	13693	2160	2173	5172	5172					0.10214232119983535
EPSPVLLSPLR	11	Unmodified	_EPSPVLLSPLR_					0	0	0			REV__ENST00000529829.5_1_11:10562928-10615679:+|nuORF	REV__ENST00000529829.5_1_11:10562928-10615679:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3578979372978	2	604.355888	1206.69722	2.8873	0.001745	0.90535	0.00054716	3.7927	0.0022921	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	1.0131	1	35794	35794		2.9952	1.5133	1	89814000	+		4323	13693	2160	2173	5173	5173					0.10214232119983535
EPSSLLQEL	9	Unmodified	_EPSSLLQEL_					0	0	0			REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2678405642509	2	508.268947	1014.52334	3.2448	0.0016492	-1.1679	-0.0005936	2.0769	0.0010556	508.2670271281566	62.397	0.40634	63.815	63.556	63.963	1.4177					30	12	3	0	0	0	0.056421	1	26163	26163		81.89	13.809	1	2731300	+		4324	9221	2161	2174	5174	5174					0.01666026623865946
EPSSLLQEL	9	Unmodified	_EPSSLLQEL_					0	0	0			REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	REV__ENST00000498522.5_1_9:35605559-35607650:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2683898806572	2	508.268947	1014.52334	2.8846	0.0014661	-1.5015	-0.00076316	1.3831	0.00070299	508.26704414536005	61.836	0.40834	63.793	63.53	63.938	1.9571					25	12	3	0	0	0	0.042285	1	25944	25944		81.89	3.7408	1	1970500	+		4325	9221	2161	2174	5175	5175					0.01666026623865946
EPSTVPQVGHL	11	Unmodified	_EPSTVPQVGHL_					0	0	0			REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3100463747978	2	582.306395	1162.59824	2.578	0.0015012	3.1378	0.0018271	5.7158	0.0033283	582.3083977371548	80.592	0.39027	81.838	81.635	82.025	1.2461					30	12	3	0	0	0	0.77451	1	33860	33860		16.149	5.3252	1	3395900	+		4326	13603	2162	2175	5176	5176					0.023442091551032718
EPSTVPQVGHL	11	Unmodified	_EPSTVPQVGHL_					0	0	0			REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	582.306395	1162.59824	2.578	0.0015012	3.1378	0.0018271	5.7158	0.0033283	582.3083977371548	80.592	0.39027	81.838	81.635	82.025	1.2461	-0.04154	8.0369E-05	NaN	16.149	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3395900	+		4327	13603	2162	2175							0.023442091551032718
EPSTVPQVGHL	11	Unmodified	_EPSTVPQVGHL_					0	0	0			REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	REV__ENST00000515764.2_1_4:25930809-25931061:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	582.306395	1162.59824	1.0481	0.0006103	2.9865	0.0017391	4.0346	0.0023494	582.3080980066871	80.204	0.38751	81.921	81.663	82.05	1.7167	0.04154	-9.5805E-05	NaN	16.149	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2592100	+		4328	13603	2162	2175							0.023442091551032718
EPSVILSKS	9	Unmodified	_EPSVILSKS_					0	0	0		ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	960.5435058474541	1	959.540788	958.533512	2.3328	0.0022384	-0.17846	-0.00017124	2.1544	0.0020672	959.5416844759183	61.451	0.70768	62.869	62.312	63.02	1.4177					29	22	2	0	0	0	0.46905	1	25621	25621		16.942	9.0321	1	2052900			4329	3190	2163	2176	5177	5177					0.05258634349104341
EPTDLLTTL	9	Unmodified	_EPTDLLTTL_					0	0	0		ENSG00000177666|ENST00000336615|PNPLA2	ENSG00000177666|ENST00000336615|PNPLA2	ENSG00000177666|ENST00000336615|PNPLA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1002.538378894329	1	1002.53537	1001.52809	2.4089	0.002415	1.7544	0.0017589	4.1633	0.0041739	1002.537236822927	66.623	0.24691	68.012	67.843	68.089	1.3888					12	7	2	0	0	0	0.34572	1	27935	27935		23.148	2.6948	1	1033600			4330	4456	2164	2177	5178	5178					0.02738910766618119
EPTELYNIL	9	Unmodified	_EPTELYNIL_					0	0	0		nc|ENSG00000127952|Q9Y6J8-5|STYXL1;STYXL1|p.R133Afs*53|1|0.05|ENSG00000127952|chr7:76013798-76013798|G/-|frameshift_variant;nc|ENSG00000127952|Q9Y6J8-4|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1091.563525378704	1	1091.56192	1090.55464	1.9452	0.0021233	-0.96691	-0.0010554	0.97824	0.0010678	1091.562424604168	69.541	0.3381	70.907	70.758	71.096	1.3657					23	10	3	0	0	0	0.029093	1	29196	29196		88.904	31.432	1	2907000			4331	2351	2165	2178	5179	5179					0.012985996579573111
EPTELYNIL	9	Unmodified	_EPTELYNIL_					0	0	0		nc|ENSG00000127952|Q9Y6J8-5|STYXL1;STYXL1|p.R133Afs*53|1|0.05|ENSG00000127952|chr7:76013798-76013798|G/-|frameshift_variant;nc|ENSG00000127952|Q9Y6J8-4|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2856933474541	2	546.284597	1090.55464	2.1417	0.00117	-0.025231	-1.3783E-05	2.1165	0.0011562	546.2845415688273	69.583	0.42693	70.949	70.701	71.128	1.3657					41	13	4	0	0	0	0.051699	2	29204	29204;29259		67.344	31.3	1	7286100			4332	2351	2165	2178	5180;5181	5180					0.012985996579573111
EPTELYNIL	9	Unmodified	_EPTELYNIL_					0	0	0		nc|ENSG00000127952|Q9Y6J8-5|STYXL1;STYXL1|p.R133Afs*53|1|0.05|ENSG00000127952|chr7:76013798-76013798|G/-|frameshift_variant;nc|ENSG00000127952|Q9Y6J8-4|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2850219607353	2	546.284597	1090.55464	1.2541	0.00068509	0.41077	0.0002244	1.6649	0.00090948	546.284803595723	69.048	0.45694	70.901	70.679	71.136	1.853					42	14	5	0	0	0	0.03795	2	28953	28953;29001		77.984	29.638	1	9615000			4333	2351	2165	2178	5182;5183	5182					0.012985996579573111
EPTELYNIL	9	Unmodified	_EPTELYNIL_					0	0	0		nc|ENSG00000127952|Q9Y6J8-5|STYXL1;STYXL1|p.R133Afs*53|1|0.05|ENSG00000127952|chr7:76013798-76013798|G/-|frameshift_variant;nc|ENSG00000127952|Q9Y6J8-4|STYXL1;nc|ENSG00000127952|Q9Y6J8-2|STYXL1;ENSG00000127952|ENST00000359697|STYXL1;nc|ENSG00000127952|Q9Y6J8-3|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	nc|ENSG00000127952|Q9Y6J8-5|STYXL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1091.562670886517	1	1091.56192	1090.55464	1.4305	0.0015615	-1.3552	-0.0014793	0.075261	8.2152E-05	1091.5628921362602	69.017	0.30586	70.87	70.766	71.072	1.853					19	9	3	0	0	0	0.045797	1	28972	28972		71.134	29.039	1	1977100			4334	2351	2165	2178	5184	5184					0.012985996579573111
EPTVQWCTK	9	Unmodified	_EPTVQWCTK_					0	0	0			REV__ENSG00000135925|ENST00000258411|WNT10A	REV__ENSG00000135925|ENST00000258411|WNT10A	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.2659179568291	2	546.263142	1090.51173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.397	1	37.397	36.897	37.897	0								0	0	0	0.26021	1	15677	15677		21.747	4.8044	1		+		4335	9961	2166	2179	5185	5185					-0.02990493671131844
EPVHQHED	8	Unmodified	_EPVHQHED_					0	0	0			REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	495.7860900759697	2	495.717413	989.420273	1.7372	0.00086114	-0.95801	-0.0004749	0.77915	0.00038624	495.71738626088904	41.858	1.3656	43.75	43.269	44.635	1.8927					71	43	3	0	0	0	2.3239	1	17733	17733		13.508	4.1604	1	1713100	+		4336	10421	2167	2180	5186	5186					-0.07486041044091962
EPVIHQHA	8	Unmodified	_EPVIHQHA_					0	0	0			REV__ENST00000606217.1_1_3:44039987-44040317:-|nuORF	REV__ENST00000606217.1_1_3:44039987-44040317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	930.4834472537041	1	930.479191	929.471915	2.9041	0.0027022	3.4739	0.0032324	6.378	0.0059346	930.4820969500064	85.44	0.72409	86.567	86.329	87.053	1.1269					68	29	4	0	0	0	0.88663	1	35796	35796		4.756	0.81161	1	26835000	+		4337	14137	2168	2181	5187	5187					0.004357474404628192
EPYRFGRFRQR	11	Unmodified	_EPYRFGRFRQR_					0	0	0			REV__ENSG00000187626|ENST00000377294|ZKSCAN4	REV__ENSG00000187626|ENST00000377294|ZKSCAN4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1512.322436511517	1	1511.79784	1510.79056	1.3179	0.0019924	-3.6277	-0.0054844	-2.3098	-0.0034919	1512.7935729808437	28.116	0.24874	28.116	28.038	28.287	0					10	7	2	0	0	0	0.14606	1	11764	11764		2.7352	2.4282	1	4188100	+		4338	11541	2169	2182	5188	5188					0.05559969345767968
EQAFALSIL	9	Unmodified	_EQAFALSIL_					0	0	0			REV__PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	REV__PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	991.5461913943291	1	991.545874	990.538597	3.8314	0.003799	-3.0374	-0.0030117	0.79395	0.00078724	991.5438804298582	60.617	0.24752	62.582	62.482	62.729	1.9653					12	7	2	0	0	0	0.40005	1	25437	25437		20.415	2.2682	1	718890	+		4339	9294	2170	2183	5189	5189					0.04294938211717181
EQDIRPRFHR	10	Unmodified	_EQDIRPRFHR_					0	0	0		nc|ENSG00000083312|Q92973-3|TNPO1;nc|ENSG00000083312|Q92973-2|TNPO1;ENSG00000083312|ENST00000337273|TNPO1	nc|ENSG00000083312|Q92973-3|TNPO1	nc|ENSG00000083312|Q92973-3|TNPO1	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9090453982353	3	451.909331	1352.70617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2058	1	7.2821	6.7821	7.7821	0.07632								0	0	0	0.66254	1	2980	2980		0.15932	0	1				4340	1039	2171	2184	5190	5190					0.04392018529028974
EQELIYFTF	9	Unmodified	_EQELIYFTF_					0	0	0		ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2932006716728	2	595.292422	1188.57029	4.1736	0.0024845	0.91276	0.00054336	5.0863	0.0030279	595.2930466063896	87.072	0.4842	88.163	88.006	88.49	1.0918					40	15	3	0	0	0	0.04812	2	36696	36696;36742		69.105	43.308	1	5682000			4341	2714	2172	2185	5191;5192	5191					-0.016451138250204167
EQELIYFTF	9	Unmodified	_EQELIYFTF_					0	0	0		ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2957031130791	2	595.292422	1188.57029	4.519	0.0026901	0.50889	0.00030294	5.0279	0.0029931	595.2926522114193	86.73	0.41367	88.225	88.012	88.425	1.4953					36	13	3	0	0	0	0.026734	2	36570	36523;36570		92.653	54.679	1	4599100			4342	2714	2172	2185	5193;5194	5194					-0.016451138250204167
EQELREFQK	9	Unmodified	_EQELREFQK_					0	0	0			REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF	REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	604.3613159060478	2	603.809302	1205.60405	4.1226	0.0024893	-3.3964	-0.0020508	0.72621	0.00043849	603.807020160255	87.103	0.36356	88.195	88.034	88.398	1.0918					20	11	3	0	0	0	0.1144	1	36707	36707		13.906	0	1	1725700	+		4343	8623	2173	2186	5195	5195					0.009473076667291025
EQELREFQK	9	Unmodified	_EQELREFQK_					0	0	0			REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF	REV__ENST00000566982.1_1_16:75263411-75272069:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	603.809302	1205.60405	4.4922	0.0027124	-4.7111	-0.0028446	-0.21896	-0.00013221	603.8058152331294	86.695	0.26742	88.191	88.064	88.332	1.4953	-0.0023084	-0.0011928	NaN	13.906	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	791120	+		4344	8623	2173	2186							0.009473076667291025
EQERRKQQLKR	11	Unmodified	_EQERRKQQLKR_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MSMS	GG20161007_CRH_Patient100_W632_01	3	750.0185424685478	2	749.93168	1497.84881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.52	1	102.68	102.18	103.18	0.16445								0	0	0	0.63775	1	43161	43161		4.897	0.36815	1				4345	3530	2174	2187	5196	5196					0.11979606200407034
EQFEHEEC	8	Unmodified	_EQFEHEEC_					0	0	0			REV__ENSG00000225110|ENST00000436629|PNMA6F	REV__ENSG00000225110|ENST00000436629|PNMA6F	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1049.544482409954	1	1050.3833	1049.37602	0.6173	0.0006484	0.37301	0.00039181	0.99031	0.0010402	1051.3847170856043	37.276	0.030563	38.56	38.537	38.567	1.284					4	2	2	0	0	0	2.3239	1	15650	15650		18.135	1.1927	1	4128600	+		4346	11889	2175	2188	5197	5197					-0.14668813252569635
EQFELIRQFSW	11	Unmodified	_EQFELIRQFSW_					0	0	0			REV__chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	REV__chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	742.3727294802666	2	741.872434	1481.73031	0.024243	1.7985E-05	-1.7684	-0.0013119	-1.7442	-0.001294	741.8713796466957	51.437	0.47959	52.831	52.468	52.948	1.3938					38	15	3	0	0	0	0.87205	1	21476	21476		11.495	4.393	1	3545100	+		4347	8322	2176	2189	5198	5198					0.0087181417204647
EQFELIRQFSW	11	Unmodified	_EQFELIRQFSW_					0	0	0			REV__chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	REV__chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	741.8710204958916	2	741.872434	1481.73031	-0.38371	-0.00028466	-1.2117	-0.00089895	-1.5954	-0.0011836	741.8713556952902	50.72	0.51302	52.695	52.454	52.967	1.9753					35	16	3	0	0	0	0.77451	3	21231	21231;21276;21322		16.149	10.417	1	2951200	+		4348	8322	2176	2189	5199;5200;5201	5199					0.0087181417204647
EQFLGAVL	8	Unmodified	_EQFLGAVL_					0	0	0		nc|ENSG00000143374|Q9BW92-2|TARS2;ENSG00000143374|ENST00000369064|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	876.4838744997978	1	876.482545	875.475269	1.1051	0.00096857	0.77139	0.00067611	1.8765	0.0016447	876.4830620502066	58.569	0.3815	59.987	59.815	60.196	1.4181					28	11	3	0	0	0	0.30755	1	24559	24559		71.134	0.26906	1	13343000			4349	3028	2177	2190	5202	5202					0.032549974944686255
EQGMEKEEY	9	Unmodified	_EQGMEKEEY_					0	0	0		ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.4961730837822	3	381.493861	1141.45975	2.0198	0.00077053	2.2661	0.0008645	4.2859	0.001635	381.49457376316235	70.091	0.50034	71.445	71.147	71.648	1.3536					34	15	3	0	0	0	0.77876	1	29412	29412		4.1895	0.60244	1	2085900			4350	4419	2178	2191	5203	5203					-0.10531701875538602
EQIFEWLYKKR	11	Unmodified	_EQIFEWLYKKR_					0	0	0		tr|A0A553SP49|A0A553SP49_NIACIProbabledual-specificityRNAmethyltransferaseRlmNOS=NialliacirculansOX=1397GN=rlmNPE=3SV=1	tr|A0A553SP49|A0A553SP49_NIACIProbabledual-specificityRNAmethyltransferaseRlmNOS=NialliacirculansOX=1397GN=rlmNPE=3SV=1	tr|A0A553SP49|A0A553SP49_NIACIProbabledual-specificityRNAmethyltransferaseRlmNOS=NialliacirculansOX=1397GN=rlmNPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1539.824755847454	1	1539.83183	1538.82455	-0.37584	-0.00057874	-4.2231	-0.0065028	-4.5989	-0.0070816	1539.8264660084294	36.708	0.13134	38.525	38.446	38.577	1.8176					12	8	2	0	0	0	0.14606	1	15409	15409		2.9952	1.5133	1	34242000			4351	16451	2179	2192	5204	5204					0.07668952994140454
EQKKKKRH	8	Unmodified	_EQKKKKRH_					0	0	0		ENSG00000109265|ENST00000682029|CRACD	ENSG00000109265|ENST00000682029|CRACD	ENSG00000109265|ENST00000682029|CRACD	MSMS	GG20161007_CRH_Patient100_A02_02	2	361.2250854372978	3	361.22448	1080.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.759	1	99.831	99.331	100.33	0.072716								0	0	0	1.0178	1	41771	41771		0.40072	0	1				4352	1663	2180	2193	5205	5205					0.11451051448261751
EQKMRDQEE	9	Unmodified	_EQKMRDQEE_					0	0	0		nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2;ENSG00000174450|ENST00000567107|GOLGA6L2	nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	nc|ENSG00000174450|Q8N9W4-1|GOLGA6L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7675048708916	2	596.766777	1191.519	0.88518	0.00052825	-0.60686	-0.00036215	0.27832	0.00016609	596.7668028927353	51.568	0.51415	52.965	52.776	53.29	1.3966					29	17	2	0	0	0	0.32838	1	21627	21627		24.021	1.2843	1	3784900			4353	4332	2181	2194	5206	5206					-0.06909805861346285
EQKREKEI	8	Unmodified	_EQKREKEI_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7916137576103	2	530.293288	1058.57202	2.7315	0.0014485	0.27306	0.0001448	3.0046	0.0015933	530.2950033443691	69.903	0.62675	71.257	70.957	71.584	1.3536					48	19	3	0	0	0	0.82039	1	29300	29300		19.439	0	1	6350800			4354	5388	2182	2195	5207	5207					0.04507939983614051
EQLEREEPEWD	11	Unmodified	_EQLEREEPEWD_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2154724001884	3	487.216044	1458.6263	0.4057	0.00019766	-3.2771	-0.0015967	-2.8714	-0.001399	487.21488667416577	10.889	0.89502	10.889	10.525	11.42	0					70	28	3	0	0	0	1.0174	2	4616	4454;4616		4.1166	2.9018	1	1522100	+		4355	11364	2183	2196	5208;5209	5209					-0.08466557446149636
EQLEREEPEWD	11	Unmodified	_EQLEREEPEWD_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	730.8164550662041	2	730.320428	1458.6263	0.092448	6.7517E-05	-3.9992	-0.0029207	-3.9068	-0.0028532	730.318735080076	11.282	0.50593	11.364	11.136	11.642	0.082325					28	16	2	0	0	0	0.92747	1	4659	4659		8.1555	2.8586	1	542280	+		4356	11364	2183	2196	5210	5210					-0.08466557446149636
EQLEREEPEWD	11	Unmodified	_EQLEREEPEWD_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	730.8164550662041	2	730.320428	1458.6263	0.092448	6.7517E-05	-3.9992	-0.0029207	-3.9068	-0.0028532	730.318735080076	11.282	0.50593	11.364	11.136	11.642	0.082325					28	16	2	0	0	0	0.14606	1	4659	4659		8.1555	2.8586	1	542280	+		4357	11364	2183	2196	5211	5211					-0.08466557446149636
EQLEREEPEWD	11	Unmodified	_EQLEREEPEWD_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	730.320428	1458.6263	-0.99149	-0.00072411	-1.2857	-0.00093898	-2.2772	-0.0016631	730.3190307692084	10.437	0.41085	11.106	11.005	11.415	0.66934	-0.13949	0.0013321	NaN	8.1555	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243870	+		4358	11364	2183	2196							-0.08466557446149636
EQLEREEPEWD	11	Unmodified	_EQLEREEPEWD_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	730.320428	1458.6263	-0.55102	-0.00040242	-2.5374	-0.0018531	-3.0884	-0.0022555	730.318746669017	10.505	0.17249	11.267	11.182	11.355	0.76165	0.020847	-0.0004961	NaN	8.1555	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143390	+		4359	11364	2183	2196							-0.08466557446149636
EQLLRFSGGK	10	Unmodified	_EQLLRFSGGK_					0	0	0			REV__ENST00000472581.1_1_6:31913911-31914451:+|nuORF	REV__ENST00000472581.1_1_6:31913911-31914451:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	567.7802001833916	2	567.81693	1133.61931	2.4611	0.0013975	4.3377	0.002463	6.7988	0.0038605	567.8197141350834	63.327	0.16155	65.271	65.183	65.345	1.9444					6	4	2	0	0	0	0.1248	1	26560	26560		8.7454	2.0222	1	198880	+		4360	11934	2184	2197	5212	5212					0.05784219254633172
EQLVQYVSI	9	Unmodified	_EQLVQYVSI_					0	0	0			REV__BMP7-DYNC2LI1|1|fusion	REV__BMP7-DYNC2LI1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7879516482353	2	539.792589	1077.57063	2.4001	0.0012956	-1.5793	-0.00085249	0.82084	0.00044308	539.7916429204602	63.549	0.74808	64.962	64.659	65.407	1.4134					110	23	6	0	0	0	0.30098	1	26728	26728		25.399	1.3787	1	97235000	+		4361	8168	2185	2198	5213	5213					0.03494305894855643
EQLYNETF	8	Unmodified	_EQLYNETF_					0	0	0			REV__DOCK5|p.K1574N|1|0.08|ENSG00000147459|chr8:25399928-25399928|G/T|missense_variant	REV__DOCK5|p.K1574N|1|0.08|ENSG00000147459|chr8:25399928-25399928|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.8113891482353	2	522.237647	1042.46074	2.8219	0.0014737	3.2051	0.0016738	6.0269	0.0031475	522.2388091158318	78.517	0.59042	79.784	79.602	80.193	1.2668					28	18	2	0	0	0	2.3239	1	33093	33093		7.9102	1.5561	1	532300	+		4362	8457	2186	2199	5214	5214					-0.05879119444330172
EQRLWKRKKKK	11	Unmodified	_EQRLWKRKKKK_					0	0	0			REV__ENSG00000187862|ENST00000368236|TTC24	REV__ENSG00000187862|ENST00000368236|TTC24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.9925109744072	3	509.991326	1526.95215	3.4921	0.0017809	-0.44509	-0.00022699	3.047	0.0015539	509.9911985918106	105.73	0.15221	105.89	105.79	105.94	0.15859					22	7	4	0	0	0	1.0405	1	45105	45105		0	0	1	33431000	+		4363	11556	2187	2200	5215	5215					0.20975138378821612
EQRLWKRKKKK	11	Unmodified	_EQRLWKRKKKK_					0	0	0			REV__ENSG00000187862|ENST00000368236|TTC24	REV__ENSG00000187862|ENST00000368236|TTC24	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	509.991326	1526.95215	3.4921	0.0017809	-0.44509	-0.00022699	3.047	0.0015539	509.9911985918106	105.73	0.15221	105.89	105.79	105.94	0.15859	0.0063577	0.00044506	NaN	0	22	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33431000	+		4364	11556	2187	2200							0.20975138378821612
EQRLWKRKKKK	11	Unmodified	_EQRLWKRKKKK_					0	0	0			REV__ENSG00000187862|ENST00000368236|TTC24	REV__ENSG00000187862|ENST00000368236|TTC24	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	509.991326	1526.95215	3.5154	0.0017928	-1.0293	-0.00052496	2.486	0.0012678	509.99108032384464	105.71	0.12927	105.88	105.81	105.94	0.16679	-0.0063577	-0.00044882	NaN	0	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30418000	+		4365	11556	2187	2200							0.20975138378821612
EQRVDDLVW	9	Unmodified	_EQRVDDLVW_					0	0	0		ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	ENSG00000215045|ENST00000457091|GRID2IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.2928344607353	2	580.290745	1158.56694	1.0358	0.00060105	-0.090432	-5.2477E-05	0.94533	0.00054857	580.2909504284262	56.096	1.0654	58.064	57.717	58.782	1.9684					77	34	3	0	0	0	0.53525	1	23409	23409		13.906	0.86358	1	5663500			4366	5253	2188	2201	5216	5216					-0.006003638790161858
EQRWMERRHWF	11	Unmodified	_EQRWMERRHWF_					0	0	0			REV__ENST00000405315.8_2_19:49403351-49403540:+|nuORF	REV__ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	554.7703124880791	3	554.268642	1659.7841	2.3154	0.0012833	2.1948	0.0012165	4.5102	0.0024998	554.6044377316293	47.522	0.22516	48.904	48.792	49.017	1.3825					9	6	2	0	0	0	0.14606	1	19912	19912		0.50596	0	1	660010	+		4367	12895	2189	2202	5217	5217					-0.0194029187725846
EQRWMERRHWF	11	Unmodified	_EQRWMERRHWF_					0	0	0			REV__ENST00000405315.8_2_19:49403351-49403540:+|nuORF	REV__ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.7703124880791	3	554.268642	1659.7841	2.3452	0.0012999	3.6975	0.0020494	6.0427	0.0033493	554.2707029133967	47.152	0.12354	49.128	49.063	49.187	1.976					5	3	2	0	0	0	0.14606	1	19742	19742		0.094841	0.094841	1	439360	+		4368	12895	2189	2202	5218	5218					-0.0194029187725846
EQTRNKWYLWR	11	Unmodified	_EQTRNKWYLWR_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	790.3984863162041	2	790.410049	1578.80554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.83	1	102	101.5	102.5	0.17032								0	0	0	0.63775	1	42845	42845		2.4985	1.169	1		+		4369	11743	2190	2203	5219	5219					0.03929416423102339
EQVANSAFVER	11	Unmodified	_EQVANSAFVER_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	625.2371093630791	2	625.312209	1248.60986	-0.12336	-7.7136E-05	1.0116	0.00063258	0.88827	0.00055545	625.3128105477825	20.263	0.21135	21.838	21.73	21.942	1.5748					11	6	2	0	0	0	0.14606	1	8424	8424		6.6304	0.89852	1	279950			4370	1194;7944	2191	2204	5220	5220					-0.004495938215768547
EQVANSAFVER	11	Unmodified	_EQVANSAFVER_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	625.312209	1248.60986	0.63355	0.00039616	0.34203	0.00021387	0.97557	0.00061004	625.3118374990813	20.726	0.1512	21.851	21.775	21.926	1.1254	0.0066291	-0.00050983	NaN	6.6304	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	392070			4371	1194;7944	2191	2204							-0.004495938215768547
EQWEGGHDQ	9	Unmodified	_EQWEGGHDQ_					0	0	0			REV__ENST00000304363.8_2_11:67957478-67957571:-|nuORF	REV__ENST00000304363.8_2_11:67957478-67957571:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1086.260546863079	1	1085.42828	1084.421	2.1963	0.0023839	-1.5861	-0.0017216	0.61015	0.00066227	1085.4302135478604	35.125	0.18166	35.425	35.358	35.54	0.29942					27	16	2	0	0	0	0.11518	1	14733	14733		7.2892	1.0834	1	17924000	+		4372	12330	2192	2205	5221	5221					-0.11783246395043534
EQWHMFKH	8	Unmodified	_EQWHMFKH_					0	0	0			REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5132018923759	3	381.511521	1141.51273	-0.75121	-0.0002866	2.6802	0.0010225	1.929	0.00073592	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.83505	1	12434	12434		18.146	1.5805	1	2428000	+		4373	9502	2193	2206	5222	5222					-0.05236234511539806
EQWHMFKH	8	Unmodified	_EQWHMFKH_					0	0	0			REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5123474001884	3	381.511521	1141.51273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.596	1	41.596	41.096	42.096	0								0	0	0	1.0178	1	17414	17414		6.7232	0.09279	1		+		4374	9502	2193	2206	5223	5223					-0.05236234511539806
EQWHMFKH	8	Unmodified	_EQWHMFKH_					0	0	0			REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5118591189384	3	381.511521	1141.51273	0.47591	0.00018157	-1.3001	-0.00049599	-0.82415	-0.00031442	381.5113313478704	23.025	1.6605	24.239	23.736	25.397	1.2145					71	53	2	0	0	0	0.8782	1	9897	9897		10.074	0.52995	1	980710	+		4375	9502	2193	2206	5224	5224					-0.05236234511539806
EQWHMFKH	8	Unmodified	_EQWHMFKH_					0	0	0			REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5088683962822	3	381.511521	1141.51273	0.0089926	3.4308E-06	-2.4115	-0.00092003	-2.4025	-0.0009166	381.5108880209181	16.178	0.66262	17.218	17.013	17.676	1.0392					31	23	2	0	0	0	0.88433	1	6884	6884		6.2058	0.9089	1	1181000	+		4376	9502	2193	2206	5225	5225					-0.05236234511539806
EQWHMFKH	8	Unmodified	_EQWHMFKH_					0	0	0			REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	REV__PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5111877322197	3	381.511521	1141.51273	0.091588	3.4942E-05	-1.9028	-0.00072593	-1.8112	-0.00069099	381.51128335645575	18.079	1.6887	19.527	19.016	20.705	1.448					88	55	2	0	0	0	0.88433	2	7334	7334;7961		6.2058	0.58097	1	793540	+		4377	9502	2193	2206	5226;5227	5226					-0.05236234511539806
EQYRREREH	9	Unmodified	_EQYRREREH_					0	0	0		ENST00000481998.1_1_6:31513879-31514336:-|nuORF;nc|ENSG00000213760|O95670-3|ATP6V1G2;ENSG00000213760|ENST00000303892|ATP6V1G2;ENST00000475917.1_1_6:31510065-31514336:-|nuORF	ENST00000481998.1_1_6:31513879-31514336:-|nuORF	ENST00000481998.1_1_6:31513879-31514336:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824645876884	3	434.881441	1301.62249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.331	1	15.101	14.601	15.601	0.76937								0	0	0	0.42693	1	5955	5955		0.96228	0.18574	1				4378	5228	2194	2207	5228	5228					-0.016251376386890115
ERDDEDFNMKL	11	Unmodified	_ERDDEDFNMKL_					0	0	0			REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.5449096560478	3	471.210124	1410.60854	1.7527	0.0008259	-1.8056	-0.0008508	-0.05283	-2.4894E-05	471.2093168426355	29.667	0.40133	29.667	29.484	29.885	0					32	12	4	0	0	0	0.82764	2	12399	12399;12449		14.171	10.054	1	1491100	+		4379	8804	2195	2208	5229;5230	5229					-0.08033595972665353
ERDDEDFNMKL	11	Unmodified	_ERDDEDFNMKL_					0	0	0			REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	471.210124	1410.60854	1.7527	0.0008259	-1.8056	-0.0008508	-0.05283	-2.4894E-05	471.2093168426355	29.667	0.40133	29.667	29.484	29.885	0	0.036339	-0.001013	NaN	14.171	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1491100	+		4380	8804	2195	2208							-0.08033595972665353
ERDDEDFNMKL	11	Unmodified	_ERDDEDFNMKL_					0	0	0			REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	471.210124	1410.60854	1.823	0.00085901	0.25036	0.00011797	2.0734	0.00097699	471.21061650141496	29.416	0.30404	29.696	29.53	29.834	0.2793	0.06458	0.0018934	NaN	14.171	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386910	+		4381	8804	2195	2208							-0.08033595972665353
ERDDEDFNMKL	11	Unmodified	_ERDDEDFNMKL_					0	0	0			REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	REV__nc|ENSG00000080200|Q68DQ2-1|CRYBG3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	471.210124	1410.60854	1.1867	0.00055918	-0.28323	-0.00013346	0.90347	0.00042573	471.2102101395301	28.251	0.18094	29.53	29.425	29.606	1.2789	-0.10092	0.0011391	NaN	14.171	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	176040	+		4382	8804	2195	2208							-0.08033595972665353
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5116149783134	3	381.511014	1141.51121	-1.6209	-0.0006184	2.3136	0.00088265	0.69264	0.00026425	381.512341337049	0.97899	1.6227	0.97899	-0.00030207	1.6224	0					149	79	2	0	0	0	0.37668	1	149	149		21.59	1.9642	1	5069800	+		4383	12985	2196	2209	5231	5231					-0.05388197066622524
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5106994509697	3	381.511014	1141.51121	-1.6183	-0.00061742	1.5539	0.00059282	-0.064465	-2.4594E-05	381.51217322987355	2.7082	2.1198	2.7082	1.4289	3.5486	0					189	92	4	0	0	0	0.37668	1	1169	1169		21.59	3.2171	1	2908400	+		4384	12985	2196	2209	5232	5232					-0.05388197066622524
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5097228884697	3	381.511014	1141.51121	-0.37576	-0.00014336	3.622	0.0013818	3.2462	0.0012385	381.5126212148603	67.108	0.9921	67.108	66.608	67.601	0					48	31	2	0	0	0	0.70577	1	28147	28147		7.1017	1.3183	1	845180	+		4385	12985	2196	2209	5233	5233					-0.05388197066622524
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.1866027712822	3	381.511014	1141.51121	-0.32662	-0.00012461	3.5226	0.0013439	3.196	0.0012193	381.51284634540997	73.298	1.1641	73.298	72.269	73.433	0					53	36	2	0	0	0	0.11866	1	30215	30215		2.086	0.89267	1	886630	+		4386	12985	2196	2209	5234	5234					-0.05388197066622524
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	381.511014	1141.51121	-0.37576	-0.00014336	3.622	0.0013818	3.2462	0.0012385	381.5126212148603	67.108	0.9921	67.108	66.608	67.601	0	0	0	NaN	7.1017	48	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845180	+		4387	12985	2196	2209							-0.05388197066622524
EREEESARH	9	Unmodified	_EREEESARH_					0	0	0			REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	REV__ENST00000423311.1_1_22:35516050-35568375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	381.511014	1141.51121	2.0413	0.0007788	1.7212	0.00065665	3.7625	0.0014355	381.5119417551923	72.919	0.47484	73.244	73.05	73.525	0.32494	-0.026909	-0.0012874	NaN	2.086	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299190	+		4388	12985	2196	2209							-0.05388197066622524
EREMLIPMFH	10	Unmodified	_EREMLIPMFH_					0	0	0			REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8828002810478	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.579	1	13.678	13.178	14.178	0.09944								0	0	0	0.66218	1	5635	5635		0.77653	0	1		+		4389	8128	2197	2210	5235	5235					-0.012699271806695833
EREMLIPMFH	10	Unmodified	_EREMLIPMFH_					0	0	0			REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8813964724541	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.478	1	14.204	13.704	14.704	0.72639								0	0	0	0.66218	1	5596	5596		0.77653	0	1		+		4390	8128	2197	2210	5236	5236					-0.012699271806695833
EREMLIPMFH	10	Unmodified	_EREMLIPMFH_					0	0	0			REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	REV__AP1M1|p.K40R|1|0.1|ENSG00000072958|chr19:16203535-16203535|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8819763064384	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.831	1	13.619	13.119	14.119	0.78751								0	0	0	0.66254	1	5322	5322		0.15932	0	1		+		4391	8128	2197	2210	5237	5237					-0.012699271806695833
ERFMEFRERGR	11	Unmodified	_ERFMEFRERGR_					0	0	0			REV__nc|ENSG00000141510|P04637-7|TP53	REV__nc|ENSG00000141510|P04637-7|TP53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.9433166384697	4	378.942668	1511.74156	-1.607	-0.00060898	1.0375	0.00039317	-0.5695	-0.00021581	378.94315799349283	13.31	0.61578	13.31	13.146	13.762	0					61	19	5	0	0	0	0.96769	2	5486	5486;5533		2.6312	0.19645	1	11843000	+		4392	8278	2198	2211	5238;5239	5238					0.006163129944980028
ERFMEFRERGR	11	Unmodified	_ERFMEFRERGR_					0	0	0			REV__nc|ENSG00000141510|P04637-7|TP53	REV__nc|ENSG00000141510|P04637-7|TP53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.1934692263603	4	378.942668	1511.74156	0.11491	4.3545E-05	-1.0362	-0.00039264	-0.92125	-0.0003491	378.9423313804581	13.101	0.31628	13.201	13.027	13.343	0.09944					34	9	5	0	0	0	1.0131	2	5430	5430;5481		1.2148	0	1	9297000	+		4393	8278	2198	2211	5240;5241	5240					0.006163129944980028
ERFMEFRERGR	11	Unmodified	_ERFMEFRERGR_					0	0	0			REV__nc|ENSG00000141510|P04637-7|TP53	REV__nc|ENSG00000141510|P04637-7|TP53	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	379.1934692263603	4	378.942668	1511.74156	0.11491	4.3545E-05	-1.0362	-0.00039264	-0.92125	-0.0003491	378.9423313804581	13.101	0.31628	13.201	13.027	13.343	0.09944					34	9	5	0	0	0	0.14606	1	5430	5430		1.2148	0.70888	1	9297000	+		4394	8278	2198	2211	5242	5242					0.006163129944980028
ERFMEFRERGR	11	Unmodified	_ERFMEFRERGR_					0	0	0			REV__nc|ENSG00000141510|P04637-7|TP53	REV__nc|ENSG00000141510|P04637-7|TP53	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.9420654177666	4	378.942668	1511.74156	-0.96357	-0.00036514	0.12817	4.8571E-05	-0.8354	-0.00031657	378.94261497240507	12.818	0.28539	13.535	13.4	13.686	0.71735					27	8	4	0	0	0	1.0131	2	5309	5309;5358		1.2148	0.76031	1	2980400	+		4395	8278	2198	2211	5243;5244	5243					0.006163129944980028
ERFMEFRERGR	11	Unmodified	_ERFMEFRERGR_					0	0	0			REV__nc|ENSG00000141510|P04637-7|TP53	REV__nc|ENSG00000141510|P04637-7|TP53	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.9422180056572	4	378.942668	1511.74156	-0.16042	-6.0791E-05	0.12585	4.7688E-05	-0.034576	-1.3102E-05	378.9424336122585	12.537	0.33361	13.324	13.124	13.458	0.78751					28	10	4	0	0	0	0.96769	1	5182	5182		2.6312	0.37851	1	2286500	+		4396	8278	2198	2211	5245	5245					0.006163129944980028
ERIRLRRCKWR	11	Unmodified	_ERIRLRRCKWR_					0	0	0			REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.9783203005791	3	524.644044	1570.9103	1.6968	0.00089021	-2.4305	-0.0012752	-0.73375	-0.00038496	524.9767831332285	42.259	0.3112	44.181	44.041	44.353	1.9211					14	9	2	0	0	0	1.039	1	17722	17722		0.45452	0.087843	1	1523100	+		4397	8353	2199	2212	5246	5246					0.14768259418679008
ERIRLRRCKWR	11	Unmodified	_ERIRLRRCKWR_					0	0	0			REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	REV__nc|ENSG00000147255|Q8N6C5-2|IGSF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	524.644044	1570.9103	1.7139	0.00089918	-0.88465	-0.00046412	0.82925	0.00043506	524.9770213151025	42.865	0.37909	44.205	44.046	44.425	1.3399	0.012175	0.0017845	NaN	0.45452	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1885000	+		4398	8353	2199	2212							0.14768259418679008
ERKAVLLIRN	10	Unmodified	_ERKAVLLIRN_					0	0	0			REV__VCL-ADK|2|fusion	REV__VCL-ADK|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.6937438845634	4	303.695024	1210.75099	-2.8882	-0.00087712	-2.3488	-0.00071331	-5.2369	-0.0015904	303.69440317953496	26.74	1.5721	26.74	25.748	27.321	0					119	51	3	0	0	0	0.89803	1	11146	11146		1.3296	0.46527	1	5068100	+		4399	8581	2200	2213	5247	5247					0.15404449342372573
ERKIRKCAE	9	Unmodified	_ERKIRKCAE_					0	0	0			REV__ENSG00000109606|ENST00000336812|DHX15	REV__ENSG00000109606|ENST00000336812|DHX15	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2128784060478	3	378.213364	1131.61826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.02	1	102.02	101.52	102.52	0								0	0	0	0.42693	1	42726	42726		1.0715	0.3738	1		+		4400	9275	2201	2214	5248	5248					0.05771681614078261
ERKKRLSRMR	10	Unmodified	_ERKKRLSRMR_					0	0	0			REV__ENST00000518198.1_1_8:142138775-142151424:+|nuORF	REV__ENST00000518198.1_1_8:142138775-142151424:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	453.9443542361259	3	453.941978	1358.8041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.536	1	12.625	12.125	13.125	0.089381								0	0	0	0.66178	1	5203	5203		1.4551	0.34536	1		+		4401	8435	2202	2215	5249	5249					0.13905503853357004
ERLLRPLDPR	10	Unmodified	_ERLLRPLDPR_					0	0	0			REV__tr|A0A553SGN1|A0A553SGN1_NIACIadeninedeaminaseOS=NialliacirculansOX=1397GN=CEQ21_11155PE=3SV=1	REV__tr|A0A553SGN1|A0A553SGN1_NIACIadeninedeaminaseOS=NialliacirculansOX=1397GN=CEQ21_11155PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2552368044853	3	422.254328	1263.74115	1.1087	0.00046814	1.2076	0.00050993	2.3163	0.00097807	422.58840918076885	92.615	0.8501	92.615	92.103	92.953	0					49	27	3	0	0	0	0.8974	1	38766	38766		1.7423	0.14999	1	1754700	+		4402	14758	2203	2216	5250	5250					0.11983261336968098
ERNYSLDLI	9	Unmodified	_ERNYSLDLI_					0	0	0		ENST00000403422.7_1_8:11627265-11637143:+|nuORF;ENST00000436750.7_1_8:11629005-11637140:+|nuORF	ENST00000403422.7_1_8:11627265-11637143:+|nuORF	ENST00000403422.7_1_8:11627265-11637143:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7975341677666	2	561.793121	1121.57169	4.6796	0.002629	1.9539	0.0010977	6.6335	0.0037267	561.7943696974849	89.057	0.31776	90.476	90.311	90.628	1.4189					15	9	2	0	0	0	0.20671	1	37523	37523		32.305	10.559	1	864510			4403	6350	2204	2217	5251	5251					0.0157652026375672
ERNYSLDLI	9	Unmodified	_ERNYSLDLI_					0	0	0		ENST00000403422.7_1_8:11627265-11637143:+|nuORF;ENST00000436750.7_1_8:11629005-11637140:+|nuORF	ENST00000403422.7_1_8:11627265-11637143:+|nuORF	ENST00000403422.7_1_8:11627265-11637143:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	561.793121	1121.57169	5.2677	0.0029593	1.8177	0.0010212	7.0853	0.0039805	561.794379307875	89.519	0.31179	90.539	90.364	90.676	1.0199	0.031709	-5.3136E-05	NaN	32.305	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1366000			4404	6350	2204	2217							0.0157652026375672
ERRLRGPV	8	Unmodified	_ERRLRGPV_					0	0	0			REV__CON__Q3SX09	REV__CON__Q3SX09	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2002746462822	3	328.201675	981.583196	-2.2769	-0.00074729	-2.5238	-0.00082831	-4.8007	-0.0015756	328.2009171283455	33.87	1.2629	33.87	33.638	34.901	0					105	40	5	0	0	0	0.88433	1	14233	14233		6.2058	2.6093	1	82373000	+	+	4405	8389	2205	2218	5252	5252					0.09166806868427102
ERRPKRRRA	9	Unmodified	_ERRPKRRRA_					0	0	0			REV__ENST00000389384.8_1_17:42273416-42274365:-|nuORF	REV__ENST00000389384.8_1_17:42273416-42274365:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	307.1151000857353	4	306.943165	1223.74355	0.16386	5.0295E-05	-0.7001	-0.00021489	-0.53624	-0.00016459	307.19293504806785	32.154	0.10685	33.979	33.895	34.002	1.8246					5	3	2	0	0	0	0.11955	1	13488	13488		0	0	1	406970	+		4406	12789	2206	2219	5253	5253					0.140631545853239
ERRRHKKRIQR	11	Unmodified	_ERRRHKKRIQR_					0	0	0		ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.9920532107353	3	521.657341	1561.95019	1.828	0.00095357	-1.0198	-0.00053198	0.80817	0.00042159	521.6565945065023	42.652	0.63005	43.992	43.764	44.394	1.3399					44	19	3	0	0	0	1.0402	1	17915	17915		0.08335	0.08335	1	4403900			4407	6676	2207	2220	5254	5254					0.19169522413631057
ERRRQLKARP	10	Unmodified	_ERRRQLKARP_					0	0	0		MER4A1_dup1701|chr13:22892801-22893203:+|2.555759800461922|0.1586828425988767|4.01|411.0|24|3|anti-sense	MER4A1_dup1701|chr13:22892801-22893203:+|2.555759800461922|0.1586828425988767|4.01|411.0|24|3|anti-sense	MER4A1_dup1701|chr13:22892801-22893203:+|2.555759800461922|0.1586828425988767|4.01|411.0|24|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2011291384697	4	328.203547	1308.78508	-0.95799	-0.00031442	-3.2002	-0.0010503	-4.1582	-0.0013647	328.20226472412736	35.606	0.401	36.881	36.661	37.062	1.2746					91	32	3	0	0	0	0.88031	1	14956	14956		3.5871	0.95582	1	12916000			4408	7794	2208	2221	5255	5255					0.14304290553968713
ERRRRGRF	8	Unmodified	_ERRRRGRF_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-2|LARP4	REV__nc|ENSG00000161813|Q71RC2-2|LARP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2225829958916	3	378.223473	1131.64859	0.2559	9.6789E-05	-2.4686	-0.00093367	-2.2127	-0.00083688	378.2228695384232	27.564	1.3466	28.843	28.444	29.791	1.2789					83	43	3	0	0	0	0.88351	2	11563	11563;11628		6.7232	0.99131	1	1308100	+		4409	10625	2209	2222	5256;5257	5256					0.08803221114112603
ERRRRGRF	8	Unmodified	_ERRRRGRF_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-2|LARP4	REV__nc|ENSG00000161813|Q71RC2-2|LARP4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	378.2235290408134	3	378.223473	1131.64859	0.2559	9.6789E-05	-2.4686	-0.00093367	-2.2127	-0.00083688	378.2228695384232	27.564	1.3466	28.843	28.444	29.791	1.2789					83	43	3	0	0	0	2.3239	1	11747	11747		3.5965	0.60125	1	1308100	+		4410	10625	2209	2222	5258	5258					0.08803221114112603
ERRRRGRF	8	Unmodified	_ERRRRGRF_					0	0	0			REV__nc|ENSG00000161813|Q71RC2-2|LARP4	REV__nc|ENSG00000161813|Q71RC2-2|LARP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2229186892509	3	378.223473	1131.64859	0.42607	0.00016115	-2.8532	-0.0010791	-2.4271	-0.00091799	378.22275758249947	26.965	1.3594	28.712	28.308	29.668	1.747					95	44	3	0	0	0	0.88846	4	11351	11351;11405;11519;11587		3.5965	0.60125	1	1139500	+		4411	10625	2209	2222	5259;5260;5261;5262	5259					0.08803221114112603
ERTTIEWERA	10	Unmodified	_ERTTIEWERA_					0	0	0			REV__nc|ENSG00000164830|Q8N573-2|OXR1	REV__nc|ENSG00000164830|Q8N573-2|OXR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.886081	1289.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.994	1	53.317	52.817	53.817	0.32283								0	0	0	0.66222	1	22201	22201		0.69767	0.24315	1		+		4412	14474	2210	2223	5263	5263					0.0031809506976969715
ERYDHRLMLKH	11	Unmodified	_ERYDHRLMLKH_					0	0	0		nc|ENSG00000128881|Q6IQ55-2|TTBK2;ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.G531Afs*12|1|0.05|ENSG00000128881|chr15:42775541-42775542|-/AATAAACATAATTAAGG|frameshift_variant;TTBK2|p.T566Qfs*5|1|0.14|ENSG00000128881|chr15:42775438-42775438|C/-|frameshift_variant	nc|ENSG00000128881|Q6IQ55-2|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.9313537478447	3	499.929627	1496.76705	-0.067884	-3.3937E-05	1.6219	0.00081084	1.554	0.0007769	499.93062386002975	12.985	0.20188	13.813	13.677	13.879	0.82789					9	6	2	0	0	0	1.0362	1	5383	5383		0.45452	0	1	609940			4413	2387	2211	2224	5264	5264					0.03853787516936791
ERYDHRLMLKH	11	Unmodified	_ERYDHRLMLKH_					0	0	0		nc|ENSG00000128881|Q6IQ55-2|TTBK2;ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.G531Afs*12|1|0.05|ENSG00000128881|chr15:42775541-42775542|-/AATAAACATAATTAAGG|frameshift_variant;TTBK2|p.T566Qfs*5|1|0.14|ENSG00000128881|chr15:42775438-42775438|C/-|frameshift_variant	nc|ENSG00000128881|Q6IQ55-2|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	499.929627	1496.76705	0.41933	0.00020963	5.4505	0.0027249	5.8698	0.0029345	499.9314552073932	13.841	0.15674	13.841	13.762	13.919	0	0.018348	0.0046508	NaN	0.45452	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	972050			4414	2387	2211	2224							0.03853787516936791
ERYDHRLMLKH	11	Unmodified	_ERYDHRLMLKH_					0	0	0		nc|ENSG00000128881|Q6IQ55-2|TTBK2;ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.G531Afs*12|1|0.05|ENSG00000128881|chr15:42775541-42775542|-/AATAAACATAATTAAGG|frameshift_variant;TTBK2|p.T566Qfs*5|1|0.14|ENSG00000128881|chr15:42775438-42775438|C/-|frameshift_variant	nc|ENSG00000128881|Q6IQ55-2|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	499.929627	1496.76705	0.83045	0.00041517	2.6464	0.001323	3.4769	0.0017382	499.9312655535713	13.601	0.22059	13.7	13.591	13.812	0.09944	-0.12223	0.00044533	NaN	0.45452	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	518190			4415	2387	2211	2224							0.03853787516936791
ESAFEEMER	9	Unmodified	_ESAFEEMER_					0	0	0		CFAP58|p.D22H|1|0.42|ENSG00000120051|chr10:104358395-104358395|G/C|missense_variant;ENSG00000120051|ENST00000369704|CFAP58	CFAP58|p.D22H|1|0.42|ENSG00000120051|chr10:104358395-104358395|G/C|missense_variant	CFAP58|p.D22H|1|0.42|ENSG00000120051|chr10:104358395-104358395|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.4887573122978	2	564.237321	1126.46009	0.37589	0.00021209	0.019521	1.1015E-05	0.39541	0.00022311	564.2368248371853	17.917	0.37274	18.09	17.892	18.265	0.17285					16	11	2	0	0	0	0.84195	1	7423	7423		1.6526	0.17072	1	242630			4416	151	2212	2225	5265	5265					-0.09808282155699999
ESDMEHCSFE	10	Unmodified	_ESDMEHCSFE_					0	0	0			REV__TSHZ3|p.H377Pfs*10|1|0.08|ENSG00000121297|chr19:31278663-31278663|T/-|frameshift_variant	REV__TSHZ3|p.H377Pfs*10|1|0.08|ENSG00000121297|chr19:31278663-31278663|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	607.2111083865166	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.604	1	65.931	65.431	66.431	0.32689								0	0	0	0.6624	1	27469	27469		0.40072	0	1		+		4417	9585	2213	2226	5266	5266					-0.19136822649716123
ESDRETKIKKN	11	Unmodified	_ESDRETKIKKN_					0	0	0			REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF	REV__ENST00000508756.2_1_5:98204705-98207835:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9115783572197	3	449.912407	1346.71539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.879	1	56.2	55.7	56.7	0.32088								0	0	0	0.63775	1	23399	23399		0.45452	0	1		+		4418	13555	2214	2227	5267	5267					0.05590322304010442
ESEEYRHVRRR	11	Unmodified	_ESEEYRHVRRR_					0	0	0			REV__ENSG00000112996|ENST00000507110|MRPS30	REV__ENSG00000112996|ENST00000507110|MRPS30	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.2633239626884	3	506.262433	1515.76547	0.2449	0.00012398	-0.51618	-0.00026132	-0.27128	-0.00013734	506.2620902339399	13.677	0.61894	14.403	13.977	14.596	0.72639					34	19	4	0	0	0	0.14606	1	5580	5580		0.45452	0.046251	1	2299200	+		4419	9375	2215	2228	5268	5268					0.028218697525289826
ESEPDDESERK	11	Unmodified	_ESEPDDESERK_					0	0	0			REV__nc|ENSG00000005436|P16383-3|GCFC2	REV__nc|ENSG00000005436|P16383-3|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.8557617068291	3	440.856516	1319.54772	-0.025532	-1.1256E-05	-1.7122	-0.00075485	-1.7378	-0.00076611	440.8559520594733	11.925	0.50072	12.619	12.479	12.98	0.69396					46	15	5	0	0	0	0.89436	1	4945	4945		5.5233	3.2706	1	5657100	+		4420	8498	2216	2229	5269	5269					-0.09927409751230698
ESFMWKGH	8	Unmodified	_ESFMWKGH_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1576415896416	3	341.156855	1020.44874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.287	1	33.582	33.082	34.082	0.29553								0	0	0	1.0178	1	13978	13978		0.40072	0	1		+		4421	11078	2217	2230	5270	5270					-0.06067014668496995
ESFMWKGH	8	Unmodified	_ESFMWKGH_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1578246951103	3	341.156855	1020.44874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.799	1	34.096	33.596	34.596	0.29701								0	0	0	1.0178	1	14192	14192		0.40072	0	1		+		4422	11078	2217	2230	5271	5271					-0.06067014668496995
ESHFFKTEVHF	11	Unmodified	_ESHFFKTEVHF_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2283508181572	3	469.894577	1406.6619	0.67037	0.000315	-0.25499	-0.00011982	0.41537	0.00019518	470.2284980234364	17.868	0.25691	19.316	19.175	19.431	1.448					14	8	2	0	0	0	1.0357	1	7407	7407		1.4551	0	1	848240	+		4423	11673	2218	2231	5272	5272					-0.025164304078089117
ESHFFKTEVHF	11	Unmodified	_ESHFFKTEVHF_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	469.894577	1406.6619	0.77853	0.00036583	-0.84429	-0.00039673	-0.065768	-3.0904E-05	469.8948627973337	18.403	0.13324	19.382	19.281	19.415	0.97922	0.033135	-0.00069236	NaN	1.4551	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525580	+		4424	11673	2218	2231							-0.025164304078089117
ESHFFKTEVHF	11	Unmodified	_ESHFFKTEVHF_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	469.894577	1406.6619	0.67037	0.000315	-0.25499	-0.00011982	0.41537	0.00019518	470.2284980234364	17.868	0.25691	19.316	19.175	19.431	1.448	-0.033135	0.00013837	NaN	1.4551	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	848240	+		4425	11673	2218	2231							-0.025164304078089117
ESIHPFGSI	9	Unmodified	_ESIHPFGSI_					0	0	0			REV__ENST00000480242.1_1_2:96950056-96950410:-|nuORF	REV__ENST00000480242.1_1_2:96950056-96950410:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7516662478447	2	493.750724	985.486896	1.3128	0.00064822	0.61479	0.00030355	1.9276	0.00095177	493.7511079710854	48.648	0.39788	50.036	49.804	50.202	1.388					28	12	3	0	0	0	0.1735	1	20371	20371		36.044	0	1	2162900	+		4426	13344	2219	2232	5273	5273					-0.0064280548217539035
ESINHVVVF	9	Unmodified	_ESINHVVVF_					0	0	0		ENST00000530208.1_1_11:86014499-86055761:+|nuORF;ENSG00000149196|ENST00000278483|HIKESHI	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2809936404228	2	522.279649	1042.54475	2.0709	0.0010816	-0.16998	-8.8779E-05	1.9009	0.00099279	522.2799063850642	43.64	0.48602	44.994	44.705	45.191	1.3536					51	15	4	0	0	0	0.057024	4	18325	18240;18286;18325;18369		65.235	29.108	1	37888000			4427	3232	2220	2233	5274;5275;5276;5277	5276					0.025174564432290936
ESINHVVVF	9	Unmodified	_ESINHVVVF_					0	0	0		ENST00000530208.1_1_11:86014499-86055761:+|nuORF;ENSG00000149196|ENST00000278483|HIKESHI	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2802612185478	2	522.279649	1042.54475	1.8696	0.00097646	-0.94046	-0.00049118	0.92915	0.00048528	522.2795302188923	43.02	0.47923	44.941	44.694	45.173	1.9211					46	15	4	0	0	0	0.073578	3	18012	17969;18012;18065		58.679	24.534	1	31422000			4428	3232	2220	2233	5278;5279;5280	5279					0.025174564432290936
ESKTYETK	8	Unmodified	_ESKTYETK_					0	0	0		ENSG00000167637|ENST00000618787|ZNF283	ENSG00000167637|ENST00000618787|ZNF283	ENSG00000167637|ENST00000618787|ZNF283	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2459289431572	2	493.245472	984.476391	0.65829	0.0003247	1.085	0.0005352	1.7433	0.00085989	493.24612417314887	22.584	0.47429	22.584	22.276	22.75	0					27	15	2	0	0	0	0.73597	2	9370	9370;9417		26.884	8.7487	1	2370700			4429	3982	2221	2234	5281;5282	5281					-0.01646832927281139
ESKTYETK	8	Unmodified	_ESKTYETK_					0	0	0		ENSG00000167637|ENST00000618787|ZNF283	ENSG00000167637|ENST00000618787|ZNF283	ENSG00000167637|ENST00000618787|ZNF283	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	985.4870483279228	1	985.483667	984.476391	1.2399	0.0012219	1.5051	0.0014832	2.745	0.0027051	985.4850441041029	29.686	0.37014	29.686	29.484	29.854	0					23	11	3	0	0	0	0.55655	1	12446	12446		43.772	13.136	1	2697400			4430	3982	2221	2234	5283	5283					-0.01646832927281139
ESLIMDWWYN	10	Unmodified	_ESLIMDWWYN_					0	0	0		XRCC5-VWA3B|1|fusion;ENST00000432242.5_1_2:98833411-98885811:+|nuORF;ENST00000448638.5_1_2:98797652-98853199:+|nuORF;nc|ENSG00000168658|Q502W6-5|VWA3B;ENST00000495571.5_1_2:98833411-98928809:+|nuORF;nc|ENSG00000168658|Q502W6-8|VWA3B;ENST00000409460.5_1_2:98703705-98907168:+|nuORF;ENSG00000168658|ENST00000477737|VWA3B;nc|ENSG00000168658|Q502W6-6|VWA3B	XRCC5-VWA3B|1|fusion	XRCC5-VWA3B|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8704101443291	3	452.869151	1355.58562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5387	1	5.2751	4.7751	5.7751	0.73642								0	0	0	0.66254	1	1880	1880		0.15932	0.01943	1				4431	17358	2222	2235	5284	5284					-0.07794570299438419
ESLLHSREL	9	Unmodified	_ESLLHSREL_					0	0	0			REV__IGSF10|p.S1444Rfs*19|1|0.14|ENSG00000152580|chr3:151445637-151445649|CTGGTGTGATTTG/-|frameshift_variant	REV__IGSF10|p.S1444Rfs*19|1|0.14|ENSG00000152580|chr3:151445637-151445649|CTGGTGTGATTTG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2961303591728	2	542.293288	1082.57202	3.3423	0.0018125	-1.6125	-0.00087442	1.7299	0.00093809	542.2918616947682	74.383	0.26735	75.701	75.53	75.797	1.318					15	8	2	0	0	0	0.34572	1	31198	31198		23.148	1.4018	1	2507500	+		4432	10424	2223	2236	5285	5285					0.03403939983604687
ESLLHSREL	9	Unmodified	_ESLLHSREL_					0	0	0			REV__IGSF10|p.S1444Rfs*19|1|0.14|ENSG00000152580|chr3:151445637-151445649|CTGGTGTGATTTG/-|frameshift_variant	REV__IGSF10|p.S1444Rfs*19|1|0.14|ENSG00000152580|chr3:151445637-151445649|CTGGTGTGATTTG/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	542.293288	1082.57202	3.3423	0.0018125	-1.6125	-0.00087442	1.7299	0.00093809	542.2918616947682	74.383	0.26735	75.701	75.53	75.797	1.318	-0.019096	0.00072542	NaN	23.148	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2507500	+		4433	10424	2223	2236							0.03403939983604687
ESLSLLSQI	9	Unmodified	_ESLSLLSQI_					0	0	0			REV__nc|ENSG00000169064|A8MT70-3|ZBBX	REV__nc|ENSG00000169064|A8MT70-3|ZBBX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2792846560478	2	495.279315	988.544076	1.3722	0.00067961	-0.14023	-6.9451E-05	1.2319	0.00061016	495.27961981540216	83.844	0.31982	85.032	84.827	85.147	1.1879					19	9	3	0	0	0	0.033794	1	35218	35218		81.613	7.1903	1	2388300	+		4434	10929	2224	2237	5286	5286					0.04934617003527819
ESNFLCAAC	9	Unmodified	_ESNFLCAAC_					0	0	0		nc|ENSG00000204930|A6H8Z2-2|FAM221B;ENSG00000204930|ENST00000423537|FAM221B	nc|ENSG00000204930|A6H8Z2-2|FAM221B	nc|ENSG00000204930|A6H8Z2-2|FAM221B	MSMS	GG20161007_CRH_Patient100_A02_02	2	479.1965209841728	2	479.193871	956.373188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	104.05	103.55	104.55	0.059502								0	0	0	0.42693	1	43763	43763		4.3292	1.7518	1				4435	5166	2225	2238	5287	5287					-0.10674359911104148
ESPLRFPFF	9	Unmodified	_ESPLRFPFF_					0	0	0			REV__ENST00000307968.11_1_5:130980269-130980314:-|nuORF	REV__ENST00000307968.11_1_5:130980269-130980314:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	569.8018676638603	2	570.297842	1138.58113	2.0509	0.0011696	2.8212	0.0016089	4.8721	0.0027786	570.3004711246427	45.623	0.22028	46.998	46.864	47.085	1.3751					10	6	2	0	0	0	0.11645	1	19119	19119		8.5933	0	1	972250	+		4436	12347	2226	2239	5288	5288					0.01738333339926612
ESPYRCHWCK	10	Unmodified	_ESPYRCHWCK_					0	0	0		ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	MSMS	GG20161007_CRH_Patient100_W632_01	3	654.7863036990166	2	654.78425	1307.55395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.787	1	41.097	40.597	41.597	1.3102								0	0	0	0.66052	1	16687	16687		3.5965	0	1				4437	5271	2227	2240	5289	5289					-0.08752841534419531
ESPYRCHWCK	10	Unmodified	_ESPYRCHWCK_					0	0	0		ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	ENSG00000221866|ENST00000321063|PLXNA4	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7856323122978	2	654.78425	1307.55395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.514	1	32.329	31.829	32.829	1.8151								0	0	0	0.65894	1	12791	12791		6.2058	1.6769	1				4438	5271	2227	2240	5290	5290					-0.08752841534419531
ESQDSILSLLP	11	Unmodified	_ESQDSILSLLP_					0	0	0		nc|ENSG00000082146|Q9C0K7-3|STRADB;ENSG00000082146|ENST00000194530|STRADB	nc|ENSG00000082146|Q9C0K7-3|STRADB	nc|ENSG00000082146|Q9C0K7-3|STRADB	MSMS	GG20161007_CRH_Patient100_A02_01	1	401.2173339724541	3	401.215204	1200.62378	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.08	1	106.08	105.58	106.58	0								0	0	0	0.63775	1	45181	45181		0.40827	0	1				4439	1027	2228	2241	5291	5291					0.031496388868845315
ESSSLGQW	8	Unmodified	_ESSSLGQW_					0	0	0			REV__ENST00000506326.1_1_3:134076549-134085275:-|nuORF	REV__ENST00000506326.1_1_3:134076549-134085275:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	893.4020873904228	1	893.399938	892.392661	2.9399	0.0026265	0.5836	0.00052138	3.5234	0.0031478	893.4010086050366	104.8	0.09201	104.96	104.92	105.01	0.16055					15	4	5	0	0	0	0.88587	1	44493	44493		5.2307	0	1	219180000	+		4440	9396	2229	2242	5292	5292					-0.05783944304312172
ESTAFEFYWLK	11	Unmodified	_ESTAFEFYWLK_					0	0	0			REV__ENST00000551739.5_1_12:56345656-56346257:+|nuORF	REV__ENST00000551739.5_1_12:56345656-56346257:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	474.2319824099541	3	474.230966	1419.67107	2.4967	0.001184	-0.64864	-0.0003076	1.8481	0.00087643	474.23079343158787	47.037	2.7853	47.037	46.66	49.446	0					214	88	6	0	0	0	0.90941	3	19645	19645;19684;19936		9.2438	6.4005	1	76225000	+		4441	8673	2230	2243	5293;5294;5295	5293					-0.021980818421525328
ESVAILPQL	9	Unmodified	_ESVAILPQL_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;nc|ENSG00000105438|P24390-2|KDELR1;KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant;ENSG00000100196|ENST00000216014|KDELR3;nc|ENSG00000100196|O43731-2|KDELR3;ENSG00000136240|ENST00000258739|KDELR2	ENSG00000105438|ENST00000330720|KDELR1;KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant;ENSG00000136240|ENST00000258739|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2857849001884	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.513	1	59.513	59.013	60.013	0								0	0	0	0.10193	1	24815	24815		34.102	3.8776	1				4442	1518;2716;1251	2231	2244	5296	5296					0.06871224728774905
ESYSVYVYK	9	Unmodified	_ESYSVYVYK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2806274294853	2	569.276772	1136.53899	0.96023	0.00054664	2.1427	0.0012198	3.1029	0.0017664	569.2793731525408	29.273	0.24081	30.555	30.464	30.705	1.2825					16	7	3	0	0	0	0.1388	1	12281	12281		39.95	17.213	1	1483200			4443	3500	2232	2245	5297	5297					-0.023816868590984086
ETAVEDFCNN	10	Unmodified	_ETAVEDFCNN_					0	0	0		ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	ENSG00000183340|ENST00000332349|JRKL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.2302123904228	2	571.226953	1140.43935	0.7222	0.00041254	2.606	0.0014886	3.3282	0.0019012	571.2281285114791	22.787	0.20584	22.787	22.722	22.928	0					10	6	2	0	0	0	0.88022	1	9516	9516		3.5965	1.9439	1	645110			4444	4649	2233	2246	5298	5298					-0.12524872535323084
ETCGCCDCE	9	Unmodified	_ETCGCCDCE_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	322.1863281130791	3	321.416801	961.228574	1.059	0.00034037	-3.3413	-0.0010739	-2.2823	-0.00073356	321.41468386052577	50.137	0.53086	50.467	50.232	50.763	0.33019					21	16	2	0	0	0	0.11957	1	21106	21106		0	0	1	560110			4445	2985	2234	2247	5299	5299					-0.25359112444903076
ETCSHGRTRQK	11	Unmodified	_ETCSHGRTRQK_					0	0	0			REV__ENST00000399353.5_2_21:35147070-35147166:+|nuORF	REV__ENST00000399353.5_2_21:35147070-35147166:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8821288943291	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6103	1	7.6103	7.1103	8.1103	0								0	0	0	0.63775	1	3128	3128		0.40827	0	1		+		4446	12876	2235	2248	5300	5300					-0.012882108563417205
ETDQKFEIGD	10	Unmodified	_ETDQKFEIGD_					0	0	0		tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.2714721560478	2	591.269675	1180.5248	-0.1776	-0.00010501	3.317	0.0019613	3.1394	0.0018563	591.2716750494717	12.27	0.19	12.964	12.852	13.042	0.69396					16	5	4	0	0	0	0.1784	1	5091	5091		51.63	7.7715	1	5309200			4447	16075	2236	2249	5301	5301					-0.05824384078027833
ETDQKFEIGD	10	Unmodified	_ETDQKFEIGD_					0	0	0		tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.2726318240166	2	591.269675	1180.5248	0.12895	7.6242E-05	2.9721	0.0017573	3.101	0.0018336	591.271578966264	12.127	0.15813	12.914	12.813	12.971	0.78751					14	4	4	0	0	0	0.16044	1	5024	5024		53.833	15.657	1	6500300			4448	16075	2236	2249	5302	5302					-0.05824384078027833
ETEGRRRR	8	Unmodified	_ETEGRRRR_					0	0	0			REV__ENST00000472096.1_1_7:134625950-134632541:+|nuORF	REV__ENST00000472096.1_1_7:134625950-134632541:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2914916872978	2	530.291945	1058.56934	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.523	1	37.341	36.841	37.841	1.8176								0	0	0	1.0178	1	14897	14897		5.2307	0.47466	1		+		4449	9613	2237	2250	5303	5303					0.042395293693289204
ETFEEECNR	9	Unmodified	_ETFEEECNR_					0	0	0		ENST00000606930.1_1_5:150891787-150892117:+|nuORF	ENST00000606930.1_1_5:150891787-150892117:+|nuORF	ENST00000606930.1_1_5:150891787-150892117:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.7339355349541	2	578.732403	1155.45025	0.83588	0.00048375	4.0135	0.0023227	4.8493	0.0028065	578.7341661817541	21.609	0.25065	21.609	21.469	21.719	0					11	7	2	0	0	0	0.7849	1	8997	8997		3.9444	1.8846	1	579550			4450	7563	2238	2251	5304	5304					-0.12125470161095109
ETFNKRIRRKK	11	Unmodified	_ETFNKRIRRKK_					0	0	0			REV__ENSG00000249961|ENST00000433154|TERB1	REV__ENSG00000249961|ENST00000433154|TERB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.6353942751884	3	492.635431	1474.88446	3.2993	0.0016253	-1.5995	-0.00078796	1.6998	0.00083739	492.6346697134832	89.678	0.64149	89.902	89.615	90.257	0.22359					40	19	3	0	0	0	1.0366	2	37588	37588;37640		0.40827	0.40827	1	751760	+		4451	11949	2239	2252	5305;5306	5305					0.16601688448031382
ETFNKRIRRKK	11	Unmodified	_ETFNKRIRRKK_					0	0	0			REV__ENSG00000249961|ENST00000433154|TERB1	REV__ENSG00000249961|ENST00000433154|TERB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	492.635431	1474.88446	3.2993	0.0016253	-1.5995	-0.00078796	1.6998	0.00083739	492.6346697134832	89.678	0.64149	89.902	89.615	90.257	0.22359	-0.04493	-0.00044	NaN	0.40827	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751760	+		4452	11949	2239	2252							0.16601688448031382
ETGLIFAVV	9	Unmodified	_ETGLIFAVV_					0	0	0			REV__ENSG00000197208|ENST00000200652|SLC22A4	REV__ENSG00000197208|ENST00000200652|SLC22A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5425903201103	1	948.54006	947.532783	2.2221	0.0021077	2.0381	0.0019332	4.2602	0.0040409	948.5422326736581	71.064	0.17914	72.405	72.241	72.42	1.3415					9	5	2	0	0	0	0.1735	1	29790	29790		36.044	1.9418	1	1743400	+		4453	11664	2240	2253	5307	5307					0.056918397000458754
ETGLIFAVV	9	Unmodified	_ETGLIFAVV_					0	0	0			REV__ENSG00000197208|ENST00000200652|SLC22A4	REV__ENSG00000197208|ENST00000200652|SLC22A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5442382693291	1	948.54006	947.532783	1.6317	0.0015477	-0.061268	-5.8115E-05	1.5704	0.0014896	948.5404385617528	70.547	0.21205	72.385	72.291	72.503	1.8378					9	6	2	0	0	0	0.12174	1	29583	29583		42.095	6.0504	1	900330	+		4454	11664	2240	2253	5308	5308					0.056918397000458754
ETGLIFAVV	9	Unmodified	_ETGLIFAVV_					0	0	0			REV__ENSG00000197208|ENST00000200652|SLC22A4	REV__ENSG00000197208|ENST00000200652|SLC22A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	948.54006	947.532783	2.2221	0.0021077	2.0381	0.0019332	4.2602	0.0040409	948.5422326736581	71.064	0.17914	72.405	72.241	72.42	1.3415	-0.027613	0.0013906	NaN	42.095	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1743400	+		4455	11664	2240	2253							0.056918397000458754
ETGLIFAVV	9	Unmodified	_ETGLIFAVV_					0	0	0			REV__ENSG00000197208|ENST00000200652|SLC22A4	REV__ENSG00000197208|ENST00000200652|SLC22A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	948.54006	947.532783	1.6317	0.0015477	-0.061268	-5.8115E-05	1.5704	0.0014896	948.5404385617528	70.547	0.21205	72.385	72.291	72.503	1.8378	-0.047584	-0.0006007	NaN	42.095	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	900330	+		4456	11664	2240	2253							0.056918397000458754
ETGQVLERGP	10	Unmodified	_ETGQVLERGP_					0	0	0		nc|ENSG00000076706|P43121-2|MCAM;ENST00000528533.5_1_11:119181936-119187838:-|nuORF;ENSG00000076706|ENST00000264036|MCAM	nc|ENSG00000076706|P43121-2|MCAM	nc|ENSG00000076706|P43121-2|MCAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1085.563403308392	1	1085.55856	1084.55129	3.49	0.0037886	0.75189	0.00081623	4.2419	0.0046048	1085.5573984266996	93.982	0.28227	95.17	94.955	95.237	1.1887					12	8	2	0	0	0	0.74985	1	39486	39486		16.149	0.30192	1	977950			4457	948	2241	2254	5309	5309					0.012393496039749152
ETKLLYLKKAF	11	Unmodified	_ETKLLYLKKAF_					0	0	0			REV__nc|ENSG00000114646|O95196-3|CSPG5	REV__nc|ENSG00000114646|O95196-3|CSPG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.4601013064384	4	339.20897	1352.80677	-1.5694	-0.00053234	0.94536	0.00032067	-0.62401	-0.00021167	339.2089405362541	41.468	1.43	41.468	40.612	42.042	0					110	44	3	0	0	0	1.0365	1	17562	17562		1.2148	0.20126	1	2816400	+		4458	9411	2242	2255	5310	5310					0.1444823773929329
ETKVGSKEI	9	Unmodified	_ETKVGSKEI_					0	0	0			REV__tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	REV__tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7771484255791	2	495.776939	989.539325	1.9379	0.00096076	-2.5615	-0.0012699	-0.62358	-0.00030916	495.7746006970102	49.416	0.65097	50.808	50.421	51.072	1.3911					37	20	3	0	0	0	0.5697	1	20708	20708		12.532	2.3482	1	1812400	+		4459	15050	2243	2256	5311	5311					0.04413732860757591
ETKVGSKEI	9	Unmodified	_ETKVGSKEI_					0	0	0			REV__tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	REV__tr|A0A553SNE3|A0A553SNE3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24300PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.776939	989.539325	1.9379	0.00096076	-2.5615	-0.0012699	-0.62358	-0.00030916	495.7746006970102	49.416	0.65097	50.808	50.421	51.072	1.3911	-0.047167	-0.00051964	NaN	12.532	37	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1812400	+		4460	15050	2243	2256							0.04413732860757591
ETMLRCFL	8	Unmodified	_ETMLRCFL_					0	0	0			REV__ENST00000551747.1_1_19:16652231-16653189:-|nuORF	REV__ENST00000551747.1_1_19:16652231-16653189:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.500048816204	1	1012.49543	1011.48816	4.4343	0.0044897	3.2723	0.0033132	7.7066	0.0078029	1012.4986891057725	89.922	0.79038	90.942	90.646	91.437	1.0199					54	24	3	0	0	0	0.87431	1	38059	38059		12.532	3.9383	1	10898000	+		4461	13832	2244	2257	5312	5312					-0.01712630709289442
ETMQSLNDR	9	Unmodified	_ETMQSLNDR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;CON__Q497I4;CON__Q92764;ENSG00000197079|ENST00000246639|KRT35	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2509643435478	2	547.250763	1092.48697	-0.20848	-0.00011409	0.05536	3.0296E-05	-0.15312	-8.3793E-05	547.2510113839724	13.978	0.18451	14.704	14.596	14.781	0.72639					17	5	4	0	0	0	0.023685	1	5799	5799		96.367	58.393	1	5921700			4462	1724	2245	2258	5313	5313					-0.055571735445028025
ETMQSLNDR	9	Unmodified	_ETMQSLNDR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;CON__Q497I4;CON__Q92764;ENSG00000197079|ENST00000246639|KRT35	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2513305544853	2	547.250763	1092.48697	0.13849	7.5789E-05	0.14535	7.9542E-05	0.28384	0.00015533	547.2510683081676	13.863	0.18676	14.691	14.579	14.766	0.82788					16	5	4	0	0	0	0.060242	1	5731	5731		63.961	25.987	1	4186400			4463	1724	2245	2258	5314	5314					-0.055571735445028025
ETRGDDDSI	9	Unmodified	_ETRGDDDSI_					0	0	0			REV__ENST00000589881.5_1_18:32917198-32917747:-|nuORF	REV__ENST00000589881.5_1_18:32917198-32917747:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.7857849001884	2	504.217443	1006.42033	2.5328	0.0012771	-4.4185	-0.0022279	-1.8857	-0.00095082	504.2152062544853	62.658	0.28287	64.603	64.438	64.721	1.9444					15	8	3	0	0	0	0.11463	1	26249	26249		4.3292	0	1	318220	+		4464	14059	2246	2259	5315	5315					-0.08262085834758182
ETRTVRDFDLS	11	Unmodified	_ETRTVRDFDLS_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	446.8945190310478	3	446.893124	1337.65754	0.25998	0.00011619	1.0502	0.00046935	1.3102	0.00058553	446.89411041105245	11.833	0.71272	11.833	11.696	12.409	0					56	22	5	0	0	0	0.50855	2	4881	4881;4921		19.144	4.306	1	130250000	+		4465	10364	2247	2260	5316;5317	5316					0.0022206037863270467
ETVFFHKEV	9	Unmodified	_ETVFFHKEV_					0	0	0		ENST00000478269.5_1_3:50380731-50381380:-|nuORF;nc|ENSG00000004838|O75800-2|ZMYND10;ENSG00000004838|ENST00000231749|ZMYND10	ENST00000478269.5_1_3:50380731-50381380:-|nuORF	ENST00000478269.5_1_3:50380731-50381380:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	567.8320190310478	2	568.292756	1134.57096	2.7564	0.0015664	-2.7151	-0.0015429	0.041303	2.3472E-05	568.293173947934	75.542	0.66254	77.324	77.072	77.734	1.7817					34	21	3	0	0	0	0.084274	1	31584	31584		30.225	4.8255	1	2607200			4466	475	2248	2261	5318	5318					0.009057256147116277
ETWWWRCWSWR	11	Unmodified	_ETWWWRCWSWR_					0	0	0			REV__ENST00000348956.6_1_14:103986274-103986647:-|nuORF	REV__ENST00000348956.6_1_14:103986274-103986647:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	841.5254394412041	2	841.377694	1680.74084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.364	1	99.562	99.062	100.06	0.19767								0	0	0	0.63775	1	41830	41830		0.30703	0.30703	1		+		4467	12528	2249	2262	5319	5319					-0.07230481654528376
ETYRKKRLQ	9	Unmodified	_ETYRKKRLQ_					0	0	0		ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	ENSG00000163440|ENST00000295645|PDCL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3563110232353	2	611.356754	1220.69895	2.1952	0.0013421	-0.85957	-0.0005255	1.3357	0.00081658	611.3562509892471	93.818	0.4102	93.818	93.615	94.025	0					22	12	3	0	0	0	0.85019	1	39191	39191		0.52476	0	1	687850			4468	3682	2250	2263	5320	5320					0.09743285928607293
EVAKSHEIDQF	11	Unmodified	_EVAKSHEIDQF_					0	0	0			REV__ENSG00000120509|ENST00000239666|PDZD11	REV__ENSG00000120509|ENST00000239666|PDZD11	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824340701103	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.239	1	59.657	59.157	60.157	1.4181								0	0	0	0.63775	1	24418	24418		1.4551	0	1		+		4469	9572	2251	2264	5321	5321					-0.013567270243811436
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3016540408134	2	509.300581	1016.58661	1.9967	0.0010169	1.7712	0.00090207	3.7679	0.001919	509.3019110376443	78.633	0.40308	78.633	78.474	78.877	0					17	12	2	0	0	0	0.34572	1	32724	32724		23.148	6.2061	1	1005700	+		4470	13547	2252	2265	5322	5322					0.07898012131749965
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3012878298759	2	509.300581	1016.58661	2.0014	0.0010193	0.78914	0.00040191	2.7905	0.0014212	509.30155594810486	78.223	0.35143	78.532	78.355	78.707	0.30933					16	10	2	0	0	0	0.34572	1	32699	32699		23.148	6.2061	1	1036700	+		4471	13547	2252	2265	5323	5323					0.07898012131749965
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3025085330009	2	509.300581	1016.58661	2.8751	0.0014643	-0.29422	-0.00014984	2.5809	0.0013145	509.3010296154767	77.305	0.38179	78.585	78.346	78.728	1.2809					17	11	2	0	0	0	0.37357	1	32445	32445		21.747	0.87544	1	2441300	+		4472	13547	2252	2265	5324	5324					0.07898012131749965
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3024474978447	2	509.300581	1016.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.711	1	78.478	77.978	78.978	1.7672								0	0	0	0.24103	1	32177	32177		23.148	1.4018	1		+		4473	13547	2252	2265	5325	5325					0.07898012131749965
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	509.300581	1016.58661	1.9967	0.0010169	1.7712	0.00090207	3.7679	0.001919	509.3019110376443	78.633	0.40308	78.633	78.474	78.877	0	0.049255	0.0009692	NaN	23.148	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1005700	+		4474	13547	2252	2265							0.07898012131749965
EVATKTKQL	9	Unmodified	_EVATKTKQL_					0	0	0			REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	REV__ENST00000507496.5_1_8:29679172-29679364:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.300581	1016.58661	2.0014	0.0010193	0.78914	0.00040191	2.7905	0.0014212	509.30155594810486	78.223	0.35143	78.532	78.355	78.707	0.30933	-0.051141	-3.1121E-05	NaN	23.148	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1036700	+		4475	13547	2252	2265							0.07898012131749965
EVAYKRWC	8	Unmodified	_EVAYKRWC_					0	0	0			REV__ENST00000427606.2_1_8:146202527-146219907:-|nuORF	REV__ENST00000427606.2_1_8:146202527-146219907:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1055.522387683392	1	1054.51386	1053.50659	2.8023	0.0029551	2.3848	0.0025148	5.1871	0.0054699	1054.5149750851485	82.524	0.27455	82.804	82.644	82.919	0.2802					14	8	2	0	0	0	0.87935	1	34494	34494		9.3474	1.4373	1	541400	+		4476	12997	2253	2266	5326	5326					-0.01802752743083147
EVCEGELINLQ	11	Unmodified	_EVCEGELINLQ_					0	0	0		ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.8027221560478	2	623.802828	1245.5911	2.5119	0.0015669	-2.9484	-0.0018392	-0.43645	-0.00027226	623.8007535286174	79.095	0.40608	80.362	80.224	80.63	1.2668					35	12	4	0	0	0	0.84637	1	33186	33186		13.042	0.80181	1	5926900			4477	4927	2254	2267	5327	5327					-0.021868915076538542
EVCSDTSNDFI	11	Unmodified	_EVCSDTSNDFI_					0	0	0			REV__ENSG00000214842|ENST00000399080|RAD51AP2	REV__ENSG00000214842|ENST00000399080|RAD51AP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.2526733279228	2	615.253168	1228.49178	2.595	0.0015966	-2.9633	-0.0018232	-0.36834	-0.00022662	615.2520220380017	76.236	0.6043	78.003	77.782	78.386	1.7672					51	18	4	0	0	0	0.85967	2	31958	31958;32053		12.241	3.1773	1	3033600	+		4478	11861	2255	2268	5328;5329	5328					-0.11332334192388771
EVDEQMLNV	9	Unmodified	_EVDEQMLNV_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000454403.1_1_13:41958968-41959286:-|nuORF	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.5024902224541	3	359.502468	1075.48558	-0.84347	-0.00030323	-2.3517	-0.00084544	-3.1952	-0.0011487	359.50263947691616	76.026	0.3748	76.026	75.852	76.226	0					38	11	6	0	0	0	0.77025	1	31652	31652		4.5289	0.58447	1	3924400			4479	4854	2256	2269	5330	5330					-0.04914807633258533
EVDVSKKTAW	10	Unmodified	_EVDVSKKTAW_					0	0	0		ENSG00000258659|ENST00000429814|TRIM34;ENST00000495668.1_1_11:5664055-5664936:+|nuORF;nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5	ENSG00000258659|ENST00000429814|TRIM34;nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	581.8091308474541	2	581.808771	1161.60299	1.6251	0.00094551	1.0055	0.000585	2.6306	0.0015305	581.8089073122507	79.23	0.28409	79.531	79.402	79.686	0.30047					14	8	2	0	0	0	0.87699	1	33172	33172		3.9444	0.3479	1	694030			4480	2519;5411	2257	2270	5331	5331					0.028650932978280252
EVEAEANIIQ	10	Unmodified	_EVEAEANIIQ_					0	0	0			REV__SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	REV__SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2846557497978	2	558.282586	1114.55062	1.4369	0.0008022	1.0616	0.00059266	2.4985	0.0013949	558.2834514673555	77.767	0.42671	79.519	79.35	79.777	1.7514					28	13	3	0	0	0	0.78468	1	32625	32625		13.906	0.39817	1	1689600	+		4481	8819	2258	2271	5332	5332					-0.0020748983574776503
EVELIKAML	9	Unmodified	_EVELIKAML_					0	0	0		tr|A0A7D6VP99|A0A7D6VP99_9CLOTSpo0Efamilysporulationregulatoryprotein-asparticacidphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_21840PE=4SV=1	tr|A0A7D6VP99|A0A7D6VP99_9CLOTSpo0Efamilysporulationregulatoryprotein-asparticacidphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_21840PE=4SV=1	tr|A0A7D6VP99|A0A7D6VP99_9CLOTSpo0Efamilysporulationregulatoryprotein-asparticacidphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_21840PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8063232302666	2	523.301736	1044.58892	2.175	0.0011382	1.4488	0.00075815	3.6238	0.0018963	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.66839	1	29051	29051		8.5933	1.8701	1	5777900			4482	16760	2259	2272	5333	5333					0.06840724545213561
EVELVHWVNE	10	Unmodified	_EVELVHWVNE_					0	0	0			REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	627.3098632693291	2	627.311677	1252.6088	0.47216	0.00029619	-2.4716	-0.0015505	-1.9994	-0.0012543	627.3097176765249	19.763	0.31078	19.957	19.775	20.086	0.19342					15	9	2	0	0	0	0.78468	1	8205	8205		13.906	0.86358	1	578380	+		4483	9454	2260	2273	5334	5334					-0.007398081904739229
EVELVHWVNE	10	Unmodified	_EVELVHWVNE_					0	0	0			REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	627.311677	1252.6088	1.1375	0.0007136	-1.3993	-0.00087782	-0.26179	-0.00016422	627.310635386364	20.15	0.402	20.15	19.917	20.319	0	0.087216	0.00072496	NaN	13.906	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324650	+		4484	9454	2260	2273							-0.007398081904739229
EVELVHWVNE	10	Unmodified	_EVELVHWVNE_					0	0	0			REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	627.311677	1252.6088	0.47216	0.00029619	-2.4716	-0.0015505	-1.9994	-0.0012543	627.3097176765249	19.763	0.31078	19.957	19.775	20.086	0.19342	-0.10617	-0.00062031	NaN	13.906	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	578380	+		4485	9454	2260	2273							-0.007398081904739229
EVELVHWVNE	10	Unmodified	_EVELVHWVNE_					0	0	0			REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	627.311677	1252.6088	0.41848	0.00026252	-1.9584	-0.0012285	-1.5399	-0.000966	627.3105362538709	19.046	0.19131	20.105	20.005	20.196	1.0585	0.041874	2.3562E-05	NaN	13.906	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	325240	+		4486	9454	2260	2273							-0.007398081904739229
EVELVHWVNE	10	Unmodified	_EVELVHWVNE_					0	0	0			REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	REV__nc|ENSG00000115806|Q9H8Y8-2|GORASP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	627.311677	1252.6088	-0.17144	-0.00010755	-1.3177	-0.0008266	-1.4891	-0.00093414	627.3109084504243	18.592	0.23933	20.04	19.85	20.09	1.448	-0.022916	0.0008274	NaN	13.906	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321010	+		4487	9454	2260	2273							-0.007398081904739229
EVEMDCFWAYC	11	Unmodified	_EVEMDCFWAYC_					0	0	0		ENST00000514367.1_1_5:162869450-162869522:+|nuORF	ENST00000514367.1_1_5:162869450-162869522:+|nuORF	ENST00000514367.1_1_5:162869450-162869522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2567016482353	2	698.256342	1394.49813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.933	1	15.046	14.546	15.546	0.11295								0	0	0	0.63775	1	6198	6198		0.35063	0	1				4488	7050	2261	2274	5335	5335					-0.18333855556875278
EVEMDCFWAYC	11	Unmodified	_EVEMDCFWAYC_					0	0	0		ENST00000514367.1_1_5:162869450-162869522:+|nuORF	ENST00000514367.1_1_5:162869450-162869522:+|nuORF	ENST00000514367.1_1_5:162869450-162869522:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	698.2557861208916	2	698.256342	1394.49813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.524	1	21.047	20.547	21.547	1.5237								0	0	0	0.63775	1	8112	8112		0.35063	0	1				4489	7050	2261	2274	5336	5336					-0.18333855556875278
EVEQLGQAHPG	11	Unmodified	_EVEQLGQAHPG_					0	0	0			REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.7861816287041	2	582.785827	1163.5571	2.0092	0.0011709	-1.8521	-0.0010794	0.15709	9.1549E-05	582.7850143029466	63.947	0.3702	63.947	63.773	64.143	0					30	11	4	0	0	0	0.46674	1	26650	26650		24.991	5.734	1	1752200	+		4490	8273	2262	2275	5337	5337					-0.018135518843791942
EVEQLGQAHPG	11	Unmodified	_EVEQLGQAHPG_					0	0	0			REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7867309451103	2	582.785827	1163.5571	2.8333	0.0016512	-2.1411	-0.0012478	0.69213	0.00040336	582.7848640985635	62.431	0.36791	63.845	63.649	64.017	1.4147					34	11	4	0	0	0	0.31168	1	26204	26204		31.268	7.2478	1	5350000	+		4491	8273	2262	2275	5338	5338					-0.018135518843791942
EVEQLGQAHPG	11	Unmodified	_EVEQLGQAHPG_					0	0	0			REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	REV__chr17:4710889-4715013|346|11.17|0.51|4.44|+|0|None,ARRB2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.7871581912041	2	582.785827	1163.5571	2.7497	0.0016025	-1.7054	-0.00099386	1.0443	0.00060862	582.7848281645004	61.905	0.40423	63.862	63.657	64.061	1.9571					37	12	4	0	0	0	0.62604	1	25986	25986		20.415	1.1575	1	4757800	+		4492	8273	2262	2275	5339	5339					-0.018135518843791942
EVFYYSCEY	9	Unmodified	_EVFYYSCEY_					0	0	0		nc|ENSG00000080910|P36980-2|CFHR2;ENSG00000080910|ENST00000367415|CFHR2;ENSG00000244414|ENST00000320493|CFHR1;ENSG00000134389|ENST00000256785|CFHR5	nc|ENSG00000080910|P36980-2|CFHR2	nc|ENSG00000080910|P36980-2|CFHR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1804992556572	3	401.495202	1201.46378	2.6259	0.0010543	0.52652	0.00021139	3.1524	0.0012657	401.8302902500014	76.158	0.18856	77.925	77.845	78.033	1.7672					6	5	2	0	0	0	0.11946	1	31991	31991		0	0	1	523480			4493	1013	2263	2276	5340	5340					-0.12889612381832194
EVGELANNPV	10	Unmodified	_EVGELANNPV_					0	0	0		tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.2654296755791	2	521.264196	1040.51384	1.864	0.00097163	-1.6106	-0.00083956	0.25336	0.00013207	521.263525217631	78.949	0.42635	79.259	79.078	79.505	0.30933					29	13	3	0	0	0	0.048317	1	33025	33025		85.642	24.284	1	4676700			4494	17020	2264	2277	5341	5341					-0.004797416616611372
EVGELANNPV	10	Unmodified	_EVGELANNPV_					0	0	0		tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2662231326103	2	521.264196	1040.51384	2.666	0.0013897	-0.58907	-0.00030706	2.0769	0.0010826	521.2631088576974	78.094	0.7308	79.375	78.95	79.68	1.2809					55	23	4	0	0	0	0.086078	2	32776	32731;32776		66.457	9.187	1	10880000			4495	17020	2264	2277	5342;5343	5343					-0.004797416616611372
EVHFGLVTSF	10	Unmodified	_EVHFGLVTSF_					0	0	0			REV__ENST00000573672.1_1_16:3817649-3820675:-|nuORF	REV__ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.2880737185478	2	568.292756	1134.57096	2.7564	0.0015664	-2.7151	-0.0015429	0.041303	2.3472E-05	568.293173947934	75.542	0.66254	77.324	77.072	77.734	1.7817					34	21	3	0	0	0	0.5476	2	31676	31676;31727		25.399	3.6527	1	2607200	+		4496	13975	2265	2278	5344;5345	5344					0.009057256147116277
EVHGMVTVEI	10	Unmodified	_EVHGMVTVEI_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000007350	REV__CON__ENSEMBL:ENSBTAP00000007350	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7863647341728	2	557.284074	1112.5536	1.6559	0.00092281	-3.5783	-0.0019941	-1.9224	-0.0010713	557.2822773264802	38.506	0.24363	39.802	39.651	39.895	1.2961					13	7	2	0	0	0	0.22411	1	16149	16149		46.021	4.1813	1	1465200	+	+	4497	8370	2266	2279	5346	5346					0.0018206201741577388
EVHKRRGRR	9	Unmodified	_EVHKRRGRR_					0	0	0			REV__ENSG00000124177|ENST00000373233|CHD6	REV__ENSG00000124177|ENST00000373233|CHD6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3597289919853	2	597.357954	1192.70135	2.8574	0.0017069	0.40809	0.00024377	3.2655	0.0019507	597.3582428300301	85.216	0.44504	85.216	85.003	85.448	0					26	13	3	0	0	0	0.84963	1	35529	35529		0.6015	0	1	1147500	+		4498	9636	2267	2280	5347	5347					0.11271179176924306
EVIRQRVVDPL	11	Unmodified	_EVIRQRVVDPL_					0	0	0			REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.9292175173759	3	441.929621	1322.76703	1.3511	0.00059707	-2.4277	-0.0010729	-1.0767	-0.00047581	441.92834636123735	40.311	0.28813	40.311	40.202	40.49	0					17	8	3	0	0	0	1.0357	1	16914	16914		1.4551	0.24029	1	595860	+		4499	8228	2268	2281	5348	5348					0.11856110788608021
EVIRQRVVDPL	11	Unmodified	_EVIRQRVVDPL_					0	0	0			REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	441.929621	1322.76703	1.3511	0.00059707	-2.4277	-0.0010729	-1.0767	-0.00047581	441.92834636123735	40.311	0.28813	40.311	40.202	40.49	0	0.16246	0.0011829	NaN	1.4551	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	595860	+		4500	8228	2268	2281							0.11856110788608021
EVIRQRVVDPL	11	Unmodified	_EVIRQRVVDPL_					0	0	0			REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	REV__PAX2|p.D204Ffs*31|1|0.04|ENSG00000075891|chr10:100781357-100781358|-/GTTTGCCCAGCCCCAGGGAT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	441.929621	1322.76703	2.1159	0.00093508	-3.6552	-0.0016154	-1.5393	-0.00068027	441.9279945254383	39.673	0.30759	39.986	39.829	40.136	0.31263	-0.16246	-0.00044452	NaN	1.4551	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	576430	+		4501	8228	2268	2281							0.11856110788608021
EVISKLYAV	9	Unmodified	_EVISKLYAV_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.3052856326103	2	511.30005	1020.58555	1.9764	0.0010105	3.059	0.0015641	5.0354	0.0025746	511.30203139476987	41.632	0.45051	41.632	41.338	41.789	0					14	9	2	0	0	0	0.32838	2	17419	17419;17465		24.021	5.8742	1	635880			4502	3442	2269	2282	5349;5350	5349					0.07607797762841528
EVISKLYAV	9	Unmodified	_EVISKLYAV_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3018981814384	2	511.30005	1020.58555	1.8825	0.00096253	1.6935	0.00086589	3.576	0.0018284	511.3009528358478	41.208	0.25613	41.525	41.371	41.627	0.31683					15	8	2	0	0	0	0.39927	1	17304	17304		20.454	5.6154	1	768280			4503	3442	2269	2282	5351	5351					0.07607797762841528
EVISKLYAV	9	Unmodified	_EVISKLYAV_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3007995486259	2	511.30005	1020.58555	2.6379	0.0013487	-1.1074	-0.00056622	1.5305	0.00078253	511.29951368420916	39.672	0.29741	40.983	40.82	41.117	1.3102					23	9	3	0	0	0	0.083604	2	16655	16611;16655		54.774	8.7526	1	2430400			4504	3442	2269	2282	5352;5353	5353					0.07607797762841528
EVISKLYAV	9	Unmodified	_EVISKLYAV_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3004943728447	2	511.30005	1020.58555	1.8368	0.00093917	-0.61244	-0.00031314	1.2244	0.00062603	511.29975872264623	39.142	0.3431	40.978	40.817	41.16	1.8366					21	10	3	0	0	0	0.20671	1	16448	16448		32.305	6.9062	1	2357300			4505	3442	2269	2282	5354	5354					0.07607797762841528
EVISRFGG	8	Unmodified	_EVISRFGG_					0	0	0			REV__ENSG00000146733|ENST00000275605|PSPH	REV__ENSG00000146733|ENST00000275605|PSPH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	864.4582397341728	1	864.457393	863.450116	2.7921	0.0024136	-1.7398	-0.001504	1.0522	0.0009096	864.4555530038717	100.51	0.15877	100.58	100.5	100.66	0.072716					7	4	2	0	0	0	0.86113	1	42083	42083		15.847	4.2069	1	7029000	+		4506	10311	2270	2283	5355	5355					0.012929426919072284
EVKKYVLP	8	Unmodified	_EVKKYVLP_					0	0	0		CON__ENSEMBL:ENSBTAP00000007350;CON__P01030;nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B	CON__ENSEMBL:ENSBTAP00000007350;nc|ENSG00000244731|P0C0L4-2|C4A	CON__ENSEMBL:ENSBTAP00000007350	MSMS	GG20161007_CRH_Patient100_A02_01	1	488.2984191775322	2	488.29731	974.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.306	1	40.306	39.806	40.806	0								0	0	0	1.0178	1	16886	16886		2.8892	0.31174	1			+	4507	326;5283	2271	2284	5356	5356					0.0917611897103825
EVKNARPK	8	Unmodified	_EVKNARPK_					0	0	0		HERV30-int_dup42|chr10:53025889-53026352:-|15.600811757304594|0.0885907607063529|7.46|417.0|17|1|anti-sense	HERV30-int_dup42|chr10:53025889-53026352:-|15.600811757304594|0.0885907607063529|7.46|417.0|17|1|anti-sense	HERV30-int_dup42|chr10:53025889-53026352:-|15.600811757304594|0.0885907607063529|7.46|417.0|17|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2818176150322	2	471.279983	940.545414	3.1035	0.0014626	-1.2182	-0.0005741	1.8853	0.0008885	471.2794199188793	75.814	0.89359	76.136	75.678	76.572	0.32163					63	28	3	0	0	0	0.8873	1	31686	31686		4.3292	2.0265	1	1833700			4508	7617	2272	2285	5357	5357					0.0727629588294576
EVKQGDKYWT	10	Unmodified	_EVKQGDKYWT_					0	0	0			REV__nc|ENSG00000124006|O75147-2|OBSL1	REV__nc|ENSG00000124006|O75147-2|OBSL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.3107177615166	2	627.311677	1252.6088	-0.17144	-0.00010755	-1.3177	-0.0008266	-1.4891	-0.00093414	627.3109084504243	18.592	0.23933	20.04	19.85	20.09	1.448					11	7	2	0	0	0	0.88579	1	7738	7738		2.9952	0	1	321010	+		4509	9629	2273	2286	5358	5358					-0.007398081904739229
EVLDRRNRRLP	11	Unmodified	_EVLDRRNRRLP_					0	0	0			REV__ENSG00000138759|ENST00000512123|FRAS1	REV__ENSG00000138759|ENST00000512123|FRAS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	356.7117187380791	4	356.711471	1422.81678	1.4172	0.00050554	-1.8923	-0.00067501	-0.47511	-0.00016948	356.7108116029184	52.006	1.1029	52.332	51.85	52.953	0.32553					141	35	5	0	0	0	1.0362	1	21688	21688		1.3296	0	1	24457000	+		4510	10078	2274	2287	5359	5359					0.1222823851726389
EVLFFFFFFFF	11	Unmodified	_EVLFFFFFFFF_					0	0	0			REV__AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|12|1|anti-sense	REV__AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|12|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	769.1014892458916	2	768.88375	1535.75295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.907	1	96.309	95.809	96.809	0.40208								0	0	0	0.63775	1	40348	40348		5.7319	1.203	1		+		4511	8122	2275	2288	5360	5360					0.0065006530758182635
EVLGDGVPPKV	11	Unmodified	_EVLGDGVPPKV_					0	0	0		ENSG00000170832|ENST00000300896|USP32;USP32|p.P757Lfs*7|1|0.07|ENSG00000170832|chr17:60211424-60211425|-/AAGTTCTGATCTCA|frameshift_variant;ENST00000589761.1_1_17:58378837-58469252:-|nuORF;USP32|p.T158Pfs*5|1|0.04|ENSG00000170832|chr17:60288622-60288623|-/CACTTGAGGTCAGG|frameshift_variant;nc|ENSG00000170832|Q8NFA0-2|USP32	ENSG00000170832|ENST00000300896|USP32	ENSG00000170832|ENST00000300896|USP32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1111.642871081829	1	1109.6201	1108.61282	3.2857	0.0036459	2.7427	0.0030433	6.0284	0.0066893	1109.6230443894772	101.02	0.15186	101.22	101.14	101.29	0.20526					9	4	3	0	0	0	0.85967	1	42478	42478		12.241	1.4167	1	34703000			4512	4163	2276	2289	5361	5361					0.062862813032325
EVLHEIEK	8	Unmodified	_EVLHEIEK_					0	0	0			REV__ENSG00000121621|ENST00000263181|KIF18A	REV__ENSG00000121621|ENST00000263181|KIF18A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	996.5370971560478	1	996.536037	995.528761	1.2169	0.0012127	0.12474	0.00012431	1.3417	0.001337	996.5362485863612	100.95	0.12611	100.95	100.87	101	0					5	3	2	0	0	0	0.87431	1	42269	42269		12.532	0	1	4667900	+		4513	9591	2277	2290	5362	5362					0.030817502063428037
EVLLPALSQN	10	Unmodified	_EVLLPALSQN_					0	0	0			REV__ENSG00000197651|ENST00000358859|CCER1	REV__ENSG00000197651|ENST00000358859|CCER1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3076660037041	2	542.305864	1082.59717	2.2674	0.0012296	3.1066	0.0016847	5.3739	0.0029143	542.307523643153	82.745	0.39681	83.016	82.817	83.214	0.27029					30	12	3	0	0	0	0.80011	1	34574	34574		12.241	2.0901	1	2984300	+		4514	11685	2278	2291	5363	5363					0.05917994786182135
EVLLRVRRIRK	11	Unmodified	_EVLLRVRRIRK_					0	0	0			REV__ENSG00000165983|ENST00000535784|PTER	REV__ENSG00000165983|ENST00000535784|PTER	MSMS	GG20161007_CRH_Patient100_W632_01	3	719.6855346560478	2	719.478069	1436.94158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.629	1	95.37	94.87	95.87	0.74124								0	0	0	0.63775	1	39812	39812		1.3295	1.3295	1		+		4515	10806	2279	2292	5364	5364					0.2405915572444428
EVLVPIKID	9	Unmodified	_EVLVPIKID_					0	0	0		tr|A0A7D6VU36|A0A7D6VU36_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10080PE=4SV=1	tr|A0A7D6VU36|A0A7D6VU36_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10080PE=4SV=1	tr|A0A7D6VU36|A0A7D6VU36_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.5470458865166	3	342.546226	1024.61685	0.363	0.00012434	2.9061	0.00099547	3.2691	0.0011198	342.5468806302398	30.941	0.74052	32.756	32.325	33.066	1.8151					62	24	3	0	0	0	0.72823	1	12986	12986		3.8763	1.5936	1	2842800			4516	16939	2280	2293	5365	5365					0.1055237079692688
EVNEKEYETNW	11	Unmodified	_EVNEKEYETNW_					0	0	0		nc|ENSG00000138593|Q93073-2|SECISBP2L;ENSG00000138593|ENST00000559471|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	MSMS	GG20161007_CRH_Patient100_W632_02	4	720.8584472537041	2	720.817521	1439.62049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.47	1	102.65	102.15	103.15	0.18066								0	0	0	0.63775	1	43105	43105		4.5289	1.7937	1				4517	2836	2281	2294	5366	5366					-0.08173655957807568
EVNFKPARK	9	Unmodified	_EVNFKPARK_					0	0	0			REV__tr|A0A7D6VNB8|A0A7D6VNB8_9CLOTRibonucleaseZOS=ClostridiumintestinaleOX=36845GN=rnzPE=3SV=1	REV__tr|A0A7D6VNB8|A0A7D6VNB8_9CLOTRibonucleaseZOS=ClostridiumintestinaleOX=36845GN=rnzPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.2743408083916	2	544.81419	1087.61383	2.8033	0.0015273	-3.3988	-0.0018517	-0.59551	-0.00032444	545.3150146527979	74.888	0.58881	76.67	76.356	76.945	1.7817					30	18	3	0	0	0	0.091909	1	31492	31492		20.454	0	1	891130	+		4518	15331	2282	2295	5367	5367					0.07352540462784418
EVQGAFCLETV	11	Unmodified	_EVQGAFCLETV_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.2899047732353	2	598.286814	1194.55907	2.1612	0.001293	3.906	0.0023369	6.0673	0.00363	598.2887321059945	65.986	0.30115	67.385	67.216	67.517	1.3989					18	9	3	0	0	0	0.46674	1	27688	27688		24.991	0	1	1705900	+		4519	9311	2283	2296	5368	5368					-0.03042259190783625
EVQGAFCLETV	11	Unmodified	_EVQGAFCLETV_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	598.286814	1194.55907	2.0334	0.0012165	5.1569	0.0030853	7.1903	0.0043018	598.2898189077201	67.425	0.15308	67.425	67.288	67.441	0	0.0043804	0.0005401	NaN	24.991	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	264670	+		4520	9311	2283	2296							-0.03042259190783625
EVQGAFCLETV	11	Unmodified	_EVQGAFCLETV_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	598.286814	1194.55907	2.1612	0.001293	3.906	0.0023369	6.0673	0.00363	598.2887321059945	65.986	0.30115	67.385	67.216	67.517	1.3989	-0.035572	-0.00095662	NaN	24.991	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1705900	+		4521	9311	2283	2296							-0.03042259190783625
EVQGAFCLETV	11	Unmodified	_EVQGAFCLETV_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	598.286814	1194.55907	1.8311	0.0010955	5.1807	0.0030995	7.0118	0.0041951	598.2895882488267	65.544	0.24886	67.452	67.28	67.529	1.9085	0.031192	0.00056857	NaN	24.991	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1674600	+		4522	9311	2283	2296							-0.03042259190783625
EVRDIREDYRK	11	Unmodified	_EVRDIREDYRK_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.5961486697197	3	493.59519	1477.76374	0.55312	0.00027302	0.69648	0.00034378	1.2496	0.00061679	493.5953903580166	20.534	0.34421	20.534	20.349	20.693	0					23	10	3	0	0	0	0.98455	1	8523	8523		4.7159	0	1	957390	+		4523	8464	2284	2297	5369	5369					0.04396815943937327
EVRDIREDYRK	11	Unmodified	_EVRDIREDYRK_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	493.59519	1477.76374	0.55312	0.00027302	0.69648	0.00034378	1.2496	0.00061679	493.5953903580166	20.534	0.34421	20.534	20.349	20.693	0	0.10601	0.00048866	NaN	4.7159	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	957390	+		4524	8464	2284	2297							0.04396815943937327
EVRDIREDYRK	11	Unmodified	_EVRDIREDYRK_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	493.59519	1477.76374	1.2563	0.0006201	-0.24128	-0.0001191	1.015	0.000501	493.5948266364334	20.137	0.31583	20.347	20.219	20.535	0.21024	-0.081327	-0.00089996	NaN	4.7159	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	609480	+		4525	8464	2284	2297							0.04396815943937327
EVRDIREDYRK	11	Unmodified	_EVRDIREDYRK_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	493.59519	1477.76374	0.75389	0.00037211	0.35276	0.00017412	1.1067	0.00054624	493.5953834705314	19.436	0.28091	20.495	20.322	20.603	1.0585	0.066661	-2.0301E-05	NaN	4.7159	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	543630	+		4526	8464	2284	2297							0.04396815943937327
EVRDIREDYRK	11	Unmodified	_EVRDIREDYRK_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	493.59519	1477.76374	0.45012	0.00022218	0.62524	0.00030862	1.0754	0.00053079	493.59555988021344	18.889	0.27857	20.337	20.18	20.458	1.448	-0.091341	0.00038318	NaN	4.7159	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478630	+		4527	8464	2284	2297							0.04396815943937327
EVRRQRREERK	11	Unmodified	_EVRRQRREERK_					0	0	0		sp|P16801|UL95_HCMVAProteinUL95OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL95PE=3SV=1;sp|Q6SW48|UL95_HCMVMProteinUL95OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL95PE=3SV=1	sp|P16801|UL95_HCMVAProteinUL95OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL95PE=3SV=1	sp|P16801|UL95_HCMVAProteinUL95OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL95PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	771.4411498904228	2	771.440203	1540.86585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.239	1	49.569	49.069	50.069	0.33019								0	0	0	0.63775	1	20639	20639		0.35063	0	1				4528	15999	2285	2298	5370	5370					0.11705526806213129
EVRRTNHW	8	Unmodified	_EVRRTNHW_					0	0	0			REV__ENSG00000091947|ENST00000206380|TMEM101	REV__ENSG00000091947|ENST00000206380|TMEM101	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	549.7498657107353	2	549.283589	1096.55262	1.609	0.00088382	-2.7222	-0.0014952	-1.1131	-0.00061142	549.2818975695504	49.885	0.34263	51.862	51.727	52.07	1.9772					17	10	2	0	0	0	2.3239	1	20928	20928		2.5775	0	1	987680	+		4529	8909	2286	2299	5371	5371					0.008210284833921833
EVRRVGRSS	9	Unmodified	_EVRRVGRSS_					0	0	0		ENSG00000116260|ENST00000367602|QSOX1	ENSG00000116260|ENST00000367602|QSOX1	ENSG00000116260|ENST00000367602|QSOX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.2013122439384	3	349.200223	1044.57884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.71	1	104.71	104.21	105.21	0								0	0	0	0.42693	1	44257	44257		2.086	0.24177	1				4530	1964	2287	2300	5372	5372					0.0583329765486269
EVRSLPRLLQV	11	Unmodified	_EVRSLPRLLQV_					0	0	0			REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2032958865166	4	328.204219	1308.78777	-1.9481	-0.00063939	-1.2481	-0.00040963	-3.1962	-0.001049	328.20360582121924	42.223	1.6218	42.223	41.435	43.057	0					154	51	4	0	0	0	1.0362	1	17721	17721		1.3296	0.11481	1	11871000	+		4531	9628	2288	2301	5373	5373					0.1457270116827658
EVSDLLVVT	9	Unmodified	_EVSDLLVVT_					0	0	0			REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	REV__nc|ENSG00000156931|Q8N3P4-2|VPS8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5374023318291	1	974.540454	973.533177	1.298	0.0012649	-0.7601	-0.00074075	0.53788	0.00052419	974.539161415366	70.012	0.53345	70.334	69.94	70.474	0.32224					25	16	2	0	0	0	0.1735	1	29352	29352		36.044	0	1	752080	+		4532	10527	2289	2302	5374	5374					0.04535214629231632
EVSDLVIIL	9	Unmodified	_EVSDLVIIL_					0	0	0		ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;ENSG00000035115|ENST00000356150|SH3YL1	ENST00000497051.5_1_2:233054-249752:-|nuORF	ENST00000497051.5_1_2:233054-249752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1000.590197741985	1	1000.59249	999.585213	1.773	0.0017741	-2.3914	-0.0023928	-0.61842	-0.00061878	1000.589906780094	78.215	0.25064	78.215	78.095	78.346	0					11	7	2	0	0	0	0.09539	1	32554	32554		50.855	0	1	333100			4533	645	2290	2303	5375	5375					0.08540378042994234
EVSDLVIIL	9	Unmodified	_EVSDLVIIL_					0	0	0		ENST00000497051.5_1_2:233054-249752:-|nuORF;nc|ENSG00000035115|Q96HL8-2|SH3YL1;ENSG00000035115|ENST00000356150|SH3YL1	ENST00000497051.5_1_2:233054-249752:-|nuORF	ENST00000497051.5_1_2:233054-249752:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1000.59249	999.585213	3.086	0.0030879	0.31486	0.00031505	3.4009	0.0034029	1000.5933757801646	76.341	0.18733	78.108	77.972	78.159	1.7672	-0.053508	0.0013431	NaN	50.855	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1129500			4534	645	2290	2303							0.08540378042994234
EVSRVLLLL	9	Unmodified	_EVSRVLLLL_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3370239138603	2	521.336967	1040.65938	2.307	0.0012027	-0.30705	-0.00016008	2	0.0010427	521.3363608302567	69.411	0.44825	70.777	70.585	71.033	1.3657					20	14	2	0	0	0	0.086433	1	29143	29143		53.833	53.833	1	1864300			4535	5470	2291	2304	5376	5376					0.14067765925187814
EVSVVTLTI	9	Unmodified	_EVSVVTLTI_					0	0	0			REV__nc|ENSG00000165186|Q96NR3-2|PTCHD1	REV__nc|ENSG00000165186|Q96NR3-2|PTCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	960.5614501833916	1	960.561189	959.553913	2.123	0.0020392	0.3458	0.00033216	2.4688	0.0023714	960.5606915876788	72.881	0.35241	73.206	73.05	73.403	0.32494					24	10	3	0	0	0	0.059546	1	30475	30475		64.236	0	1	1683100	+		4536	10770	2292	2305	5377	5377					0.07251805008922929
EVTKQYAMK	9	Unmodified	_EVTKQYAMK_					0	0	0			REV__nc|ENSG00000136111|O60343-4|TBC1D4	REV__nc|ENSG00000136111|O60343-4|TBC1D4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.5264770388603	3	366.526837	1096.55868	-0.15694	-5.7521E-05	-0.75951	-0.00027838	-0.91645	-0.0003359	366.52652384266844	14.539	0.33858	15.436	15.312	15.651	0.89664					15	13	2	0	0	0	0.70108	1	6089	6089		4.5289	0.33936	1	605140	+		4537	9973	2293	2306	5378	5378					0.014263658800018675
EVTQKELV	8	Unmodified	_EVTQKELV_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2669250369072	2	473.266207	944.517862	2.4567	0.0011627	-0.34538	-0.00016346	2.1113	0.00099922	473.2661853279022	57.718	0.15893	57.718	57.658	57.817	0					6	4	2	0	0	0	0.87935	1	24087	24087		9.3474	0	1	526740	+		4538	14529	2294	2307	5379	5379					0.043383478320379254
EVTRFLST	8	Unmodified	_EVTRFLST_					0	0	0		ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	952.5085327029228	1	952.509822	951.502546	1.1687	0.0011132	-1.5284	-0.0014558	-0.3597	-0.00034262	952.5081038455932	100.82	0.14967	100.82	100.72	100.87	0					7	4	2	0	0	0	0.87431	1	42215	42215		12.532	0	1	7332000			4539	1856	2295	2308	5380	5380					0.024854810348415413
EVTRWLEL	8	Unmodified	_EVTRWLEL_					0	0	0		nc|ENSG00000146453|Q8NA58|PNLDC1;ENSG00000146453|ENST00000392167|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	nc|ENSG00000146453|Q8NA58|PNLDC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1045.566210925579	1	1045.56767	1044.5604	4.0123	0.0041952	-1.7507	-0.0018304	2.2617	0.0023647	1045.5654373207233	73.808	0.52293	75.605	75.377	75.9	1.7962					36	16	3	0	0	0	0.38289	1	31017	31017		57.471	3.6386	1	8661200			4540	3155	2296	2309	5381	5381					0.03989742960266085
EVVFSVRGL	9	Unmodified	_EVVFSVRGL_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2931091189384	2	503.290017	1004.56548	2.7844	0.0014013	2.8139	0.0014162	5.5983	0.0028176	503.29152954905885	73.85	0.4291	75.646	75.409	75.838	1.7962					28	13	3	0	0	0	0.5697	1	31021	31021		12.532	1.4171	1	2407000			4541	3385	2297	2310	5382	5382					0.06338046822918386
EVVPKRRRQ	9	Unmodified	_EVVPKRRRQ_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3589965701103	2	584.357088	1166.69962	3.3962	0.0019846	-1.7459	-0.0010202	1.6503	0.00096435	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.83753	1	31144	31144		1.8442	1.8442	1	5910500			4542	2014	2298	2311	5383	5383					0.122941253683166
EVWLFTFI	8	Unmodified	_EVWLFTFI_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7862426638603	2	527.784036	1053.55352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.177	1	84.438	83.938	84.938	0.26083								0	0	0	1.0178	1	35208	35208		6.3541	1.1234	1		+		4543	11097	2299	2312	5384	5384					0.028884300797017204
EWAPTALL	8	Unmodified	_EWAPTALL_					0	0	0			REV__ENST00000169298.7_1_3:186793626-186793869:+|nuORF	REV__ENST00000169298.7_1_3:186793626-186793869:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7451965212822	2	450.744911	899.475269	2.8305	0.0012758	-1.0147	-0.00045737	1.8158	0.00081847	450.74436816046995	50.075	0.32043	51.467	51.292	51.613	1.3911					17	9	2	0	0	0	0.82039	1	20930	20930		19.439	4.8573	1	1895200	+		4544	12046	2300	2313	5385	5385					0.0215099749447063
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8165771365166	2	640.81419	1279.61383	1.8526	0.0011872	0.66099	0.00042357	2.5136	0.0016107	640.8147074549495	84.855	1.2711	86.014	85.719	86.99	1.159					159	46	5	0	0	0	0.00030345	7	35658	35522;35569;35619;35658;35698;35737;35792		137.42	85.794	1	60168000			4545	2335	2301	2314	5386;5387;5388;5389;5390;5391;5392	5389					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8176147341728	2	640.81419	1279.61383	4.1752	0.0026755	0.15826	0.00010142	4.3334	0.0027769	640.8143707960617	86.775	4.1509	87.867	87.452	91.603	1.0918					242	134	2	0	0	0	0.026734	24	36783	36628;36679;36730;36783;36839;36884;36938;36992;37044;37096;37161;37214;37266;37316;37420;37471;37561;37612;37666;37786;37879;37944;38034;38100		92.653	58.252	1	5118800			4546	2335	2301	2314	5393;5394;5395;5396;5397;5398;5399;5400;5401;5402;5403;5404;5405;5406;5407;5408;5409;5410;5411;5412;5413;5414;5415;5416	5396					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8170654177666	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.749	1	91.731	91.231	92.231	0.98157								0	0	0	0.026209	1	38230	38230		75.761	45.124	1				4547	2335	2301	2314	5417	5417					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8154174685478	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.879	1	91.861	91.361	92.361	0.98157								0	0	0	0.026209	1	38282	38282		75.761	37.787	1				4548	2335	2301	2314	5418	5418					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	640.8174316287041	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.091	1	93.027	92.527	93.527	0.93623								0	0	0	0.041996	1	38786	38786		47.749	20.865	1				4549	2335	2301	2314	5419	5419					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8164550662041	2	640.81419	1279.61383	2.1927	0.0014051	0.072399	4.6394E-05	2.2651	0.0014515	640.8143232995759	84.251	1.1689	85.847	85.581	86.75	1.5962					160	40	5	0	0	0	0.0070725	10	35396	35264;35309;35349;35396;35435;35475;35514;35565;35624;35686		114.2	66.453	1	58988000			4550	2335	2301	2314	5420;5421;5422;5423;5424;5425;5426;5427;5428;5429	5423					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8166381716728	2	640.81419	1279.61383	4.4099	0.0028259	-0.34911	-0.00022371	4.0607	0.0026022	640.8141392627041	88.175	1.5013	89.622	89.061	90.562	1.4467					72	46	2	0	0	0	0.033102	8	37393	36991;37039;37133;37276;37330;37393;37446;37495		82.529	51.893	1	1944200			4551	2335	2301	2314	5430;5431;5432;5433;5434;5435;5436;5437	5435					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8132202029228	2	640.81419	1279.61383	4.1463	0.002657	-2.0027	-0.0012834	2.1436	0.0013736	641.3154732509781	89.592	0.72375	90.997	90.676	91.4	1.4044					33	22	2	0	0	0	0.086433	1	37760	37760		53.833	23.196	1	973590			4552	2335	2301	2314	5438	5438					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8215820193291	2	640.81419	1279.61383	3.7699	0.0024158	-0.10917	-6.9958E-05	3.6607	0.0023458	640.813954559433	90.147	0.7284	91.552	91.304	92.033	1.4045					40	22	2	0	0	0	0.031145	2	37901	37901;37948		85.642	47.466	1	765240			4553	2335	2301	2314	5439;5440	5439					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8181030154228	2	640.81419	1279.61383	2.9632	0.0018988	2.2186	0.0014217	5.1817	0.0033205	640.8152826672754	113.05	0.42278	113.2	113.02	113.44	0.14912					18	12	2	0	0	0	0.043696	1	48962	48962		72.968	45.339	1	1287900			4554	2335	2301	2314	5441	5441					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8160278201103	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.259	1	87.806	87.306	88.306	1.547								0	0	0	0.038408	1	36342	36342		66.457	34.151	1				4555	2335	2301	2314	5442	5442					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8158447146416	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.468	1	88.015	87.515	88.515	1.547								0	0	0	0.04981	1	36445	36445		57.722	30.838	1				4556	2335	2301	2314	5443	5443					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8165161013603	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.693	1	88.188	87.688	88.688	1.4953								0	0	0	0.013924	1	36549	36549		92.653	54.478	1				4557	2335	2301	2314	5444	5444					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8168212771416	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.802	1	88.297	87.797	88.797	1.4953								0	0	0	0.025933	1	36596	36596		82.529	44.354	1				4558	2335	2301	2314	5445	5445					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8177978396416	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.933	1	88.428	87.928	88.928	1.4953								0	0	0	0.025933	1	36651	36651		82.529	48.128	1				4559	2335	2301	2314	5446	5446					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8176147341728	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.058	1	88.553	88.053	89.053	1.4953								0	0	0	0.026209	1	36703	36703		75.761	37.585	1				4560	2335	2301	2314	5447	5447					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8161498904228	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.185	1	88.68	88.18	89.18	1.4953								0	0	0	0.026323	1	36757	36757		72.968	40.662	1				4561	2335	2301	2314	5448	5448					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8175536990166	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.309	1	88.805	88.305	89.305	1.4953								0	0	0	0.026323	1	36810	36810		72.968	45.339	1				4562	2335	2301	2314	5449	5449					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8165161013603	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.47	1	88.966	88.466	89.466	1.4953								0	0	0	0.025933	1	36876	36876		82.529	48.128	1				4563	2335	2301	2314	5450	5450					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8165161013603	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.591	1	89.086	88.586	89.586	1.4953								0	0	0	0.025933	1	36926	36926		82.529	53.448	1				4564	2335	2301	2314	5451	5451					-0.01479459537222283
EWASRFWLW	9	Unmodified	_EWASRFWLW_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1;EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant;EMC1|p.Q491Hfs*45|1|0.04|ENSG00000127463|chr1:19233095-19233095|C/-|frameshift_variant	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.8160888552666	2	640.81419	1279.61383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.837	1	93.164	92.664	93.664	1.3269								0	0	0	0.072403	1	38668	38668		39.95	7.6442	1				4565	2335	2301	2314	5452	5452					-0.01479459537222283
EWDLLQRMIS	10	Unmodified	_EWDLLQRMIS_					0	0	0		DUS1L|p.L134S|1|1.0|ENSG00000169718|chr17:82062970-82062970|A/G|missense_variant	DUS1L|p.L134S|1|1.0|ENSG00000169718|chr17:82062970-82062970|A/G|missense_variant	DUS1L|p.L134S|1|1.0|ENSG00000169718|chr17:82062970-82062970|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5441	1	6.2805	5.7805	6.7805	0.73642								0	0	0	0.66255	1	2299	2299		0.13989	0	1				4566	432	2302	2315	5453	5453					0.010571113458354375
EWFWWYWQKEK	11	Unmodified	_EWFWWYWQKEK_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	858.3996459841728	2	858.403901	1714.79325	1.7799	0.0015279	-2.4044	-0.0020639	-0.62446	-0.00053604	858.4009098195534	48.13	0.53532	48.46	48.162	48.698	0.33034					28	17	3	0	0	0	1.0405	1	20225	20225		0	0	1	543070			4567	455;6068	2303	2316	5454	5454					-0.03555620039946916
EWFWWYWQKEK	11	Unmodified	_EWFWWYWQKEK_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.3993408083916	2	858.403901	1714.79325	1.8308	0.0015716	-2.6685	-0.0022907	-0.83771	-0.00071909	858.4011498975411	46.859	0.57227	48.241	47.869	48.442	1.3825					39	17	3	0	0	0	1.0405	1	19673	19673		0	0	1	606490			4568	455;6068	2303	2316	5455	5455					-0.03555620039946916
EWFWWYWQKEK	11	Unmodified	_EWFWWYWQKEK_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.4001953005791	2	858.403901	1714.79325	1.4785	0.0012692	-2.7041	-0.0023212	-1.2256	-0.001052	858.401330219364	46.478	0.64599	48.448	48.033	48.679	1.9703					47	20	3	0	0	0	1.0405	1	19498	19498		0	0	1	982480			4569	455;6068	2303	2316	5456	5456					-0.03555620039946916
EWLDVYMHIL	10	Unmodified	_EWLDVYMHIL_					0	0	0		ENSG00000166788|ENST00000524803|SAAL1	ENSG00000166788|ENST00000524803|SAAL1	ENSG00000166788|ENST00000524803|SAAL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	440.2493469119072	3	440.221525	1317.64274	2.5232	0.0011107	0.9325	0.00041051	3.4557	0.0015213	440.2218898958478	45.311	0.22651	46.677	46.563	46.79	1.3653					9	6	2	0	0	0	0.12535	1	18981	18981		3.5871	0.74377	1	388750			4570	3919	2304	2317	5457	5457					-0.0033710302307099482
EWLERYMDKMR	11	Unmodified	_EWLERYMDKMR_					0	0	0			REV__ENSG00000204450|ENST00000533122|TRIM64	REV__ENSG00000204450|ENST00000533122|TRIM64	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.5829955935478	3	519.583128	1555.72755	0.24545	0.00012753	0.86375	0.00044879	1.1092	0.00057632	519.5836573407021	14.645	0.29949	15.542	15.352	15.651	0.89664					39	11	5	0	0	0	1.039	1	6051	6051		0.45452	0	1	7763000	+		4571	11607	2305	2318	5458	5458					-0.028081005488274968
EWNAKEISWK	10	Unmodified	_EWNAKEISWK_					0	0	0			REV__tr|A0A553SKR0|A0A553SKR0_NIACItRNA(Adenine-N(1))-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_19100PE=4SV=1	REV__tr|A0A553SKR0|A0A553SKR0_NIACItRNA(Adenine-N(1))-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_19100PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886291384697	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.112	1	15.225	14.725	15.725	0.11295								0	0	0	0.66222	1	6272	6272		0.69767	0	1		+		4572	14963	2306	2319	5459	5459					0.0072018456346540916
EWNSYYSKIL	10	Unmodified	_EWNSYYSKIL_					0	0	0		nc|ENSG00000271271|P0DTE5-2|UGT2A2;ENSG00000271271|ENST00000604629|UGT2A2;nc|ENSG00000173610|P0DTE4-4|UGT2A1	nc|ENSG00000271271|P0DTE5-2|UGT2A2	nc|ENSG00000271271|P0DTE5-2|UGT2A2	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831054568291	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.25	1	115.4	114.9	115.9	0.14976								0	0	0	0.66254	1	49839	49839		0.15932	0.064481	1				4573	5444	2307	2320	5460	5460					-0.009546375306626942
EWPSDKGILVF	11	Unmodified	_EWPSDKGILVF_					0	0	0		nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196|AFDN;ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-5|AFDN	nc|ENSG00000130396|P55196-2|AFDN	nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.8404418826103	2	645.840071	1289.66559	1.8715	0.0012087	0.61513	0.00039728	2.4866	0.0016059	645.8398572925945	71.169	1.6946	72.51	71.99	73.684	1.3415					139	54	3	0	0	0	0.066063	10	30021	29723;29773;29920;29972;30021;30073;30128;30195;30245;30298		63.227	39.207	1	8163200			4574	2433	2308	2321	5461;5462;5463;5464;5465;5466;5467;5468;5469;5470	5465					0.03234239366042857
EWPSDKGILVF	11	Unmodified	_EWPSDKGILVF_					0	0	0		nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196|AFDN;ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-5|AFDN	nc|ENSG00000130396|P55196-2|AFDN	nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.8390380740166	2	645.840071	1289.66559	1.2049	0.00077815	1.0071	0.00065045	2.212	0.0014286	645.8398926976515	70.78	1.8533	72.618	71.946	73.8	1.8378					124	59	3	0	0	0	0.029255	10	29565	29517;29565;29712;29763;29818;29869;29921;29972;30023;30076		80.676	44.17	1	6495800			4575	2433	2308	2321	5471;5472;5473;5474;5475;5476;5477;5478;5479;5480	5472					0.03234239366042857
EWPVNRVF	8	Unmodified	_EWPVNRVF_					0	0	0			REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7767822146416	2	523.774534	1045.53451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.8	1	65.207	64.707	65.707	1.4071								0	0	0	1.0178	1	26759	26759		20.454	4.6854	1		+		4576	8537	2309	2322	5481	5481					0.013568935086595957
EWPVNRVF	8	Unmodified	_EWPVNRVF_					0	0	0			REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7752563357353	2	523.774534	1045.53451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.15	1	65.094	64.594	65.594	1.9444								0	0	0	1.0178	1	26499	26499		26.884	13.841	1		+		4577	8537	2309	2322	5482	5482					0.013568935086595957
EWPVNRVF	8	Unmodified	_EWPVNRVF_					0	0	0			REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	REV__ENST00000588300.1_1_19:45920077-45926632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7758056521416	2	523.774534	1045.53451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.268	1	65.212	64.712	65.712	1.9444								0	0	0	1.0178	1	26548	26548		26.884	8.7373	1		+		4578	8537	2309	2322	5483	5483					0.013568935086595957
EWQTEWHK	8	Unmodified	_EWQTEWHK_					0	0	0		ENST00000562955.2_2_1:43918838-43918946:+|nuORF	ENST00000562955.2_2_1:43918838-43918946:+|nuORF	ENST00000562955.2_2_1:43918838-43918946:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5115844607353	3	381.845446	1142.51451	-0.24971	-9.5352E-05	-3.1577	-0.0012058	-3.4074	-0.0013011	381.8446459505448	17.899	0.83634	18.878	18.336	19.172	0.97922					55	32	2	0	0	0	2.3239	1	7276	7276		14.838	3.198	1	600070			4579	7340	2310	2323	5484	5484					-0.05104902221955854
EWQTEWHK	8	Unmodified	_EWQTEWHK_					0	0	0		ENST00000562955.2_2_1:43918838-43918946:+|nuORF	ENST00000562955.2_2_1:43918838-43918946:+|nuORF	ENST00000562955.2_2_1:43918838-43918946:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5133239626884	3	381.845446	1142.51451	-0.13712	-5.2359E-05	-1.4959	-0.00057122	-1.6331	-0.00062358	381.84466502713735	12.931	1.2107	13.759	12.821	14.032	0.82788					59	41	2	0	0	0	2.3239	1	5126	5126		14.838	6.6827	1	538430			4580	7340	2310	2323	5485	5485					-0.05104902221955854
EWRAQSESAQS	11	Unmodified	_EWRAQSESAQS_					0	0	0		nc|ENSG00000179344|P01920|HLA-DQB1;ENSG00000179344|ENST00000434651|HLA-DQB1;ENSG00000232629|ENST00000437316|HLA-DQB2;ENSG00000198502|ENST00000374975|HLA-DRB5;nc|ENSG00000232629|P05538|HLA-DQB2	nc|ENSG00000179344|P01920|HLA-DQB1	nc|ENSG00000179344|P01920|HLA-DQB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	639.7878906130791	2	639.789098	1277.56364	4.0591	0.002597	-3.0426	-0.0019466	1.0166	0.0006504	639.787557867728	89.755	0.47768	91.159	90.891	91.368	1.4045					24	14	2	0	0	0	0.46674	1	37797	37797		24.991	0.97039	1	1917700			4581	4511	2311	2324	5486	5486					-0.06403658723661465
EWRSEWQFKWR	11	Unmodified	_EWRSEWQFKWR_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|239|2|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|239|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0057861208916	5	328.365255	1636.78989	1.472	0.00048337	-2.2131	-0.0007267	-0.74104	-0.00024333	328.56548248976827	61.149	0.12631	61.479	61.422	61.548	0.32974					5	3	2	0	0	0	0.14606	1	25601	25601		0	0	1	254690	+		4582	14199	2312	2325	5487	5487					-0.003028700939466944
EWSLATGWRF	10	Unmodified	_EWSLATGWRF_					0	0	0		nc|ENSG00000105197|Q3ZCQ8-3|TIMM50;ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50	nc|ENSG00000105197|Q3ZCQ8-3|TIMM50	nc|ENSG00000105197|Q3ZCQ8-3|TIMM50	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8116332888603	2	626.809105	1251.60366	3.1349	0.001965	-0.21192	-0.00013284	2.923	0.0018321	626.8092116705485	74.207	0.34071	75.525	75.31	75.651	1.318					25	10	3	0	0	0	0.05359	2	31103	31103;31155		89.401	68.947	1	2259000			4583	1502	2313	2326	5488;5489	5488					-0.012080672624279032
EWSLATGWRF	10	Unmodified	_EWSLATGWRF_					0	0	0		nc|ENSG00000105197|Q3ZCQ8-3|TIMM50;ENSG00000105197|ENST00000607714|TIMM50;nc|ENSG00000105197|Q3ZCQ8-2|TIMM50	nc|ENSG00000105197|Q3ZCQ8-3|TIMM50	nc|ENSG00000105197|Q3ZCQ8-3|TIMM50	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8099853396416	2	626.809105	1251.60366	2.338	0.0014655	0.093983	5.8909E-05	2.432	0.0015244	626.8090003495279	73.678	0.30962	75.474	75.317	75.627	1.7962					21	9	3	0	0	0	0.065719	1	30896	30896		103.42	82.966	1	2048700			4584	1502	2313	2326	5490	5490					-0.012080672624279032
EWSPYTKIFQF	11	Unmodified	_EWSPYTKIFQF_					0	0	0		ENST00000480769.5_1_1:185267169-185274781:-|nuORF;ENST00000459929.5_1_1:185267169-185275646:-|nuORF;ENSG00000116679|ENST00000367498|IVNS1ABP	ENST00000480769.5_1_1:185267169-185274781:-|nuORF	ENST00000480769.5_1_1:185267169-185274781:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	723.3597900271416	2	723.358628	1444.7027	1.9196	0.0013886	0.21354	0.00015446	2.1331	0.001543	723.3588463674798	76.003	0.69276	77.297	77.038	77.731	1.2938					74	22	5	0	0	0	0.0015433	3	31864	31864;31904;31962		159.1	129.26	1	22928000			4585	1978	2314	2327	5491;5492;5493	5491					-0.0018608908821988734
EWSPYTKIFQF	11	Unmodified	_EWSPYTKIFQF_					0	0	0		ENST00000480769.5_1_1:185267169-185274781:-|nuORF;ENST00000459929.5_1_1:185267169-185275646:-|nuORF;ENSG00000116679|ENST00000367498|IVNS1ABP	ENST00000480769.5_1_1:185267169-185274781:-|nuORF	ENST00000480769.5_1_1:185267169-185274781:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	723.3584472537041	2	723.358628	1444.7027	2.1123	0.0015279	-0.096487	-6.9795E-05	2.0158	0.0014581	723.3585893656316	75.461	0.69457	77.242	77.04	77.734	1.7817					66	22	4	0	0	0	6.6186E-05	3	31709	31604;31654;31709		187.14	150.64	1	26001000			4586	1978	2314	2327	5494;5495;5496	5496					-0.0018608908821988734
EWTVDTSKLVF	11	Unmodified	_EWTVDTSKLVF_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.8449584841728	2	662.84281	1323.67107	1.7174	0.0011384	0.33216	0.00022017	2.0496	0.0013586	662.8430687575628	67.651	0.39403	69.028	68.819	69.213	1.3778					37	12	4	0	0	0	0.0021907	2	28357	28357;28410		150.62	106.64	1	8567700			4587	1196	2315	2328	5497;5498	5497					0.02217918157839449
EWTVDTSKLVF	11	Unmodified	_EWTVDTSKLVF_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	662.8444091677666	2	662.84281	1323.67107	1.0355	0.00068636	0.5647	0.00037431	1.6002	0.0010607	662.8432821978527	67.145	0.3357	69.034	68.86	69.195	1.8889					34	10	4	0	0	0	0.0029592	2	28141	28141;28185		135.72	91.504	1	9698100			4588	1196	2315	2328	5499;5500	5499					0.02217918157839449
EYADGAEER	9	Unmodified	_EYADGAEER_					0	0	0			REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF	REV__ENST00000497613.2_1_8:145658938-145666334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1039.433520495892	1	1039.43269	1038.42542	2.6525	0.0027571	-4.1714	-0.0043359	-1.5189	-0.0015788	1039.4298963004112	60.292	1.4378	60.62	60.295	61.733	0.32809					66	45	2	0	0	0	0.75101	1	25615	25615		5.2969	1.3525	1	940090	+		4589	10617	2316	2329	5501	5501					-0.09225781972122604
EYAHLFEVF	9	Unmodified	_EYAHLFEVF_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ZNF317|p.D533Efs*10|1|0.27|ENSG00000130803|chr19:9161243-9161244|-/GT|frameshift_variant;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;nc|ENSG00000130803|Q96PQ6-2|ZNF317;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7805663943291	2	577.779482	1153.54441	2.2938	0.0013253	-0.33897	-0.00019585	1.9548	0.0011295	577.7794583943605	68.123	0.59369	69.993	69.704	70.298	1.87					44	18	4	0	0	0	0.046276	1	28577	28577		70.716	10.326	1	6620800			4590	2462	2317	2330	5502	5502					-0.026219632766242285
EYAHLFEVF	9	Unmodified	_EYAHLFEVF_					0	0	0		nc|ENSG00000130803|Q96PQ6-3|ZNF317;nc|ENSG00000130803|Q96PQ6-4|ZNF317;ENST00000591278.5_1_19:9268612-9272106:+|nuORF;ZNF317|p.D533Efs*10|1|0.27|ENSG00000130803|chr19:9161243-9161244|-/GT|frameshift_variant;ENST00000590152.1_1_19:9267931-9272106:+|nuORF;nc|ENSG00000130803|Q96PQ6-2|ZNF317;ENSG00000130803|ENST00000247956|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	nc|ENSG00000130803|Q96PQ6-3|ZNF317	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	577.779482	1153.54441	2.029	0.0011723	0.33475	0.00019341	2.3638	0.0013658	577.7798319021362	68.726	0.6547	70.091	69.662	70.317	1.3657	0.04893	0.00038714	NaN	70.716	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5096500			4591	2462	2317	2330							-0.026219632766242285
EYAKTFGYTF	10	Unmodified	_EYAKTFGYTF_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.7896606326103	2	613.790047	1225.56554	1.5823	0.00097122	-0.82869	-0.00050864	0.75365	0.00046258	613.7899081706439	45.943	0.28352	47.318	47.146	47.43	1.3751					12	8	2	0	0	0	0.60583	1	19257	19257		22.736	11.096	1	854040			4592	3918	2318	2331	5503	5503					-0.03821997967770585
EYAKTFGYTF	10	Unmodified	_EYAKTFGYTF_					0	0	0		nc|ENSG00000166783|Q9Y4F3-3|MARF1;nc|ENSG00000166783|Q9Y4F3-4|MARF1;nc|ENSG00000166783|Q9Y4F3-5|MARF1;ENSG00000166783|ENST00000396368|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	nc|ENSG00000166783|Q9Y4F3-3|MARF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.2927734255791	2	613.790047	1225.56554	1.4739	0.00090468	0.47454	0.00029127	1.9485	0.0011959	613.7904465100994	45.427	0.22321	47.386	47.269	47.493	1.9596					12	6	2	0	0	0	0.846	1	19030	19030		7.2892	1.5574	1	458200			4593	3918	2318	2331	5504	5504					-0.03821997967770585
EYAVMLYTW	9	Unmodified	_EYAVMLYTW_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2772704958916	2	588.275718	1174.53688	2.9303	0.0017238	-0.75671	-0.00044515	2.1736	0.0012787	588.275811116906	80.886	0.42445	82.119	81.923	82.348	1.2332					21	13	2	0	0	0	0.12174	2	33936	33936;33991		42.095	29.563	1	3154800			4594	5452;719	2319	2332	5505;5506	5505					-0.04340438868553065
EYAVMLYTW	9	Unmodified	_EYAVMLYTW_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2751953005791	2	588.275718	1174.53688	1.5986	0.00094043	-0.42605	-0.00025064	1.1726	0.0006898	588.2754117462911	80.45	0.45009	82.167	81.996	82.446	1.7167					29	14	3	0	0	0	0.042029	1	33756	33756		74.423	43.786	1	2400200			4595	5452;719	2319	2332	5507	5507					-0.04340438868553065
EYAVMLYTW	9	Unmodified	_EYAVMLYTW_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1175.549609363079	1	1175.54416	1174.53688	1.1391	0.0013391	-0.29502	-0.00034681	0.84409	0.00099227	1175.5438978447137	80.506	0.29892	82.223	82.025	82.324	1.7167					11	9	2	0	0	0	0.13873	1	33809	33809		39.957	29.133	1	1004900			4596	5452;719	2319	2332	5508	5508					-0.04340438868553065
EYDLIVHQL	9	Unmodified	_EYDLIVHQL_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.2986328005791	2	565.298039	1128.58152	0.9083	0.00051346	-0.97511	-0.00055123	-0.066811	-3.7768E-05	565.2976914318543	51.631	0.34266	53.027	52.894	53.237	1.3966					29	11	3	0	0	0	0.00032761	3	21642	21604;21642;21684		136.33	78.862	1	13870000			4597	2174	2320	2333	5509;5510;5511	5510					0.022377082691491523
EYDLIVHQL	9	Unmodified	_EYDLIVHQL_					0	0	0		nc|ENSG00000122958|O75436-2|VPS26A;ENSG00000122958|ENST00000263559|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	nc|ENSG00000122958|O75436-2|VPS26A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2976562380791	2	565.298039	1128.58152	-0.18795	-0.00010625	-0.61596	-0.0003482	-0.80391	-0.00045445	565.2974468363306	51.117	0.30095	53.093	52.912	53.213	1.9753					30	11	3	0	0	0	7.2896E-05	2	21417	21368;21417		147.83	80.487	1	10337000			4598	2174	2320	2333	5512;5513	5513					0.022377082691491523
EYDNFFQHL	9	Unmodified	_EYDNFFQHL_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;ENST00000491646.1_1_2:122217554-122217677:-|nuORF	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.7703735232353	2	606.769645	1211.52474	2.3742	0.0014406	0.065073	3.9484E-05	2.4393	0.0014801	606.7697312391983	59.213	0.57588	60.632	60.35	60.926	1.4196					57	18	5	0	0	0	0.018723	3	24780	24780;24830;24870		100.37	58.267	1	55372000			4599	908	2321	2334	5514;5515;5516	5514					-0.07256339287368974
EYDNFFQHL	9	Unmodified	_EYDNFFQHL_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;ENST00000491646.1_1_2:122217554-122217677:-|nuORF	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.7706786990166	2	606.769645	1211.52474	2.1228	0.0012881	-0.28386	-0.00017223	1.839	0.0011158	606.7695084717831	58.71	0.56979	60.68	60.401	60.971	1.969					60	18	5	0	0	0	0.01454	2	24648	24596;24648		103.75	67.092	1	51334000			4600	908	2321	2334	5517;5518	5518					-0.07256339287368974
EYDNVPEARF	10	Unmodified	_EYDNVPEARF_					0	0	0			REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.2903320193291	2	620.28566	1238.55677	2.8332	0.0017574	3.0406	0.0018861	5.8738	0.0036435	620.2877588827639	64.674	0.27617	66.081	65.894	66.17	1.4071					15	8	2	0	0	0	0.38174	1	27125	27125		34.402	13.948	1	793150	+		4601	11771	2322	2335	5519	5519					-0.05296971604252576
EYDNVPEARF	10	Unmodified	_EYDNVPEARF_					0	0	0			REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.2889282107353	2	620.28566	1238.55677	2.3184	0.001438	2.1758	0.0013496	4.4942	0.0027877	620.2871550068959	64.118	0.25076	66.046	65.888	66.139	1.928					13	7	2	0	0	0	0.49886	1	26931	26931		27.629	7.1752	1	796500	+		4602	11771	2322	2335	5520	5520					-0.05296971604252576
EYDNVPEARF	10	Unmodified	_EYDNVPEARF_					0	0	0			REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	620.28566	1238.55677	2.8332	0.0017574	3.0406	0.0018861	5.8738	0.0036435	620.2877588827639	64.674	0.27617	66.081	65.894	66.17	1.4071	0.017683	0.00047119	NaN	34.402	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793150	+		4603	11771	2322	2335							-0.05296971604252576
EYDNVPEARF	10	Unmodified	_EYDNVPEARF_					0	0	0			REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	REV__nc|ENSG00000204179|Q4JDL3-13|PTPN20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	620.28566	1238.55677	2.3184	0.001438	2.1758	0.0013496	4.4942	0.0027877	620.2871550068959	64.118	0.25076	66.046	65.888	66.139	1.928	-0.017683	-0.00060165	NaN	34.402	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	796500	+		4604	11771	2322	2335							-0.05296971604252576
EYDPVIILI	9	Unmodified	_EYDPVIILI_					0	0	0		ENSG00000173409|ENST00000310256|ARV1	ENSG00000173409|ENST00000310256|ARV1	ENSG00000173409|ENST00000310256|ARV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3071777224541	2	537.807708	1073.60086	4.299	0.002312	-4.405	-0.0023691	-0.10607	-5.7044E-05	538.3059406703838	91.402	0.50352	92.384	92.102	92.605	0.98156					39	15	4	0	0	0	0.1735	2	38469	38469;38525		36.044	17.909	1	1951500			4605	4280	2323	2336	5521;5522	5521					0.06700664560048608
EYDPVIILI	9	Unmodified	_EYDPVIILI_					0	0	0		ENSG00000173409|ENST00000310256|ARV1	ENSG00000173409|ENST00000310256|ARV1	ENSG00000173409|ENST00000310256|ARV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8106567263603	2	537.807708	1073.60086	3.7085	0.0019945	-3.1043	-0.0016695	0.60426	0.00032497	538.3060230818127	90.996	0.41137	92.362	92.124	92.535	1.366					30	12	3	0	0	0	0.1735	1	38338	38338		36.044	7.5574	1	2009700			4606	4280	2323	2336	5523	5523					0.06700664560048608
EYECQVGR	8	Unmodified	_EYECQVGR_					0	0	0		nc|ENSG00000161270|O60500-2|NPHS1;ENSG00000161270|ENST00000378910|NPHS1	nc|ENSG00000161270|O60500-2|NPHS1	nc|ENSG00000161270|O60500-2|NPHS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2161132693291	2	492.216192	982.41783	1.5498	0.00076284	0.36345	0.0001789	1.9133	0.00094173	492.2161323365009	73.842	0.34079	73.842	73.642	73.983	0					23	10	3	0	0	0	0.87431	1	30720	30720		12.532	3.1841	1	1144000			4607	3592	2324	2337	5524	5524					-0.07408212773395917
EYEGKWLLF	9	Unmodified	_EYEGKWLLF_					0	0	0		ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8035156130791	2	592.802957	1183.59136	3.0757	0.0018233	-0.83377	-0.00049426	2.2419	0.001329	592.8027166427188	70.823	0.31238	72.176	72.002	72.314	1.3536					12	9	2	0	0	0	0.20671	1	29703	29703		32.305	7.6316	1	1150600			4608	3630	2325	2338	5525	5525					0.006908962745228564
EYEKLIFEYK	10	Unmodified	_EYEKLIFEYK_					0	0	0			REV__ENSG00000021852|ENST00000371237|C8B	REV__ENSG00000021852|ENST00000371237|C8B	MSMS	GG20161007_CRH_Patient100_W632_02	4	681.3530761599541	2	681.353011	1360.69147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.975	1	46.934	46.434	47.434	1.9596								0	0	0	0.66176	1	18845	18845		1.4819	0	1		+		4609	8559	2326	2339	5526	5526					0.025550888176667286
EYFEHLSET	9	Unmodified	_EYFEHLSET_					0	0	0			REV__AMPH|p.V84F|1|0.07|ENSG00000078053|chr7:38494483-38494483|C/A|missense_variant	REV__AMPH|p.V84F|1|0.07|ENSG00000078053|chr7:38494483-38494483|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7561523318291	2	577.753661	1153.49277	1.3472	0.00077836	1.0048	0.00058055	2.3521	0.0013589	577.754301300497	77.273	0.3817	79.025	78.786	79.167	1.7514					21	11	2	0	0	0	0.27148	1	32377	32377		26.884	3.7352	1	1982600	+		4610	8125	2327	2340	5527	5527					-0.07783751761212443
EYFESPFTI	9	Unmodified	_EYFESPFTI_					0	0	0		ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7641479372978	2	566.763497	1131.51244	2.5068	0.0014208	0.42141	0.00023884	2.9282	0.0016596	566.7635509251442	77.749	0.40743	79.03	78.76	79.167	1.2809					37	12	4	0	0	0	0.0037165	3	32562	32562;32609;32662		125.62	58.281	1	15438000			4611	5106	2328	2341	5528;5529;5530	5528					-0.048053757504249006
EYFESPFTI	9	Unmodified	_EYFESPFTI_					0	0	0		ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1132.530932605267	1	1132.51972	1131.51244	2.0805	0.0023562	1.7276	0.0019566	3.8081	0.0043128	1132.5227587480397	77.685	0.40681	78.966	78.791	79.198	1.2809					29	12	3	0	0	0	0.002761	2	32637	32587;32637		128.37	80.02	1	4827300			4612	5106	2328	2341	5531;5532	5532					-0.048053757504249006
EYFESPFTI	9	Unmodified	_EYFESPFTI_					0	0	0		ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.7645141482353	2	566.763497	1131.51244	1.3932	0.00078959	0.029573	1.6761E-05	1.4227	0.00080635	566.763379211023	77.211	0.47867	78.962	78.753	79.231	1.7514					41	14	4	0	0	0	0.006164	3	32384	32338;32384;32439		117.6	39.614	1	7276900			4613	5106	2328	2341	5533;5534;5535	5534					-0.048053757504249006
EYFESPFTI	9	Unmodified	_EYFESPFTI_					0	0	0		ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	ENSG00000198938|ENST00000362079|MT-CO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1132.525683581829	1	1132.51972	1131.51244	1.2044	0.001364	2.9933	0.00339	4.1978	0.0047541	1132.523412485144	77.273	0.41466	79.025	78.753	79.167	1.7514					33	12	4	0	0	0	4.1345E-05	2	32423	32374;32423		156.16	81.733	1	5270200			4614	5106	2328	2341	5536;5537	5537					-0.048053757504249006
EYFKSFNF	8	Unmodified	_EYFKSFNF_					0	0	0		ENSG00000151470|ENST00000425929|C4orf33	ENSG00000151470|ENST00000425929|C4orf33	ENSG00000151470|ENST00000425929|C4orf33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2533447146416	2	541.2531	1080.49165	0.80065	0.00043336	-0.11485	-6.2162E-05	0.6858	0.00037119	541.2529373080507	53.218	0.46159	54.619	54.379	54.84	1.4005					46	18	4	0	0	0	0.072211	4	22299	22219;22261;22299;22338		96.285	63.979	1	23563000			4615	3289	2329	2342	5538;5539;5540;5541	5540					-0.045379213394198814
EYFKSFNF	8	Unmodified	_EYFKSFNF_					0	0	0		ENSG00000151470|ENST00000425929|C4orf33	ENSG00000151470|ENST00000425929|C4orf33	ENSG00000151470|ENST00000425929|C4orf33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2542602419853	2	541.2531	1080.49165	1.1048	0.00059797	0.40144	0.00021728	1.5062	0.00081525	541.2532570202927	52.684	0.42731	54.657	54.385	54.812	1.9722					47	15	4	0	0	0	0.22866	4	22086	22000;22047;22086;22130		78.149	47.925	1	26714000			4616	3289	2329	2342	5542;5543;5544;5545	5544					-0.045379213394198814
EYFSYPVSL	9	Unmodified	_EYFSYPVSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.526660144329	1	1104.5248	1103.51753	2.4423	0.0026976	-0.31046	-0.00034291	2.1319	0.0023547	1104.5245004375026	70.039	0.65981	71.392	71.084	71.744	1.3536					62	20	4	0	0	0	0.0075027	5	29407	29321;29369;29407;29445;29489		112.59	84.964	1	14201000			4617	1733	2330	2343	5546;5547;5548;5549;5550	5548					-0.03009071887800019
EYFSYPVSL	9	Unmodified	_EYFSYPVSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7673828005791	2	552.76604	1103.51753	2.6753	0.0014788	-0.47765	-0.00026403	2.1977	0.0012148	552.7659945755437	70.12	0.72238	71.474	71.052	71.775	1.3536					58	22	5	0	0	0	0.013238	5	29382	29343;29382;29419;29458;29502		104.8	77.17	1	23629000			4618	1733	2330	2343	5551;5552;5553;5554;5555	5552					-0.03009071887800019
EYFSYPVSL	9	Unmodified	_EYFSYPVSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1104.527148425579	1	1104.5248	1103.51753	2.5715	0.0028403	-0.66586	-0.00073546	1.9057	0.0021049	1104.5240153110024	69.583	0.62988	71.436	71.136	71.766	1.853					58	19	4	0	0	0	0.0054014	5	29172	29128;29172;29209;29251;29310		120.45	80.501	1	13177000			4619	1733	2330	2343	5556;5557;5558;5559;5560	5557					-0.03009071887800019
EYFSYPVSL	9	Unmodified	_EYFSYPVSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7673828005791	2	552.76604	1103.51753	2.4286	0.0013425	-0.42704	-0.00023606	2.0016	0.0011064	552.7659193358404	69.582	0.69395	71.435	71.072	71.766	1.853					62	21	5	0	0	0	0.013238	5	29134	29134;29183;29222;29261;29301		104.8	75.718	1	21181000			4620	1733	2330	2343	5561;5562;5563;5564;5565	5561					-0.03009071887800019
EYGDRCMRP	9	Unmodified	_EYGDRCMRP_					0	0	0			REV__nc|ENSG00000286219|P0DPK4|NOTCH2NLC	REV__nc|ENSG00000286219|P0DPK4|NOTCH2NLC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7445556521416	2	563.742051	1125.46955	2.2988	0.0012959	2.2045	0.0012428	4.5033	0.0025387	563.7431546175899	84.963	0.30768	86.122	85.995	86.303	1.159					22	9	3	0	0	0	0.71526	1	35652	35652		6.7232	0	1	810480	+		4621	14568	2331	2344	5566	5566					-0.08816792351149161
EYGFYHDFF	9	Unmodified	_EYGFYHDFF_					0	0	0		nc|ENSG00000143374|Q9BW92-2|TARS2;ENSG00000143374|ENST00000369064|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.7551147341728	2	612.753464	1223.49238	2.79	0.0017096	-0.24409	-0.00014956	2.5459	0.00156	612.7532817613481	65.26	0.56015	66.659	66.443	67.004	1.3989					50	17	4	0	0	0	0.03795	3	27394	27350;27394;27450		77.984	40.01	1	5302700			4622	3028	2332	2345	5567;5568;5569	5568					-0.1104312669040155
EYGFYHDFF	9	Unmodified	_EYGFYHDFF_					0	0	0		nc|ENSG00000143374|Q9BW92-2|TARS2;ENSG00000143374|ENST00000369064|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	nc|ENSG00000143374|Q9BW92-2|TARS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.7545043826103	2	612.753464	1223.49238	1.7983	0.0011019	-0.23918	-0.00014656	1.5591	0.00095533	612.7534460943855	64.799	0.56377	66.727	66.518	67.082	1.928					48	17	4	0	0	0	0.022807	2	27174	27174;27228		97.075	59.101	1	4280000			4623	3028	2332	2345	5570;5571	5570					-0.1104312669040155
EYGIFNQKI	9	Unmodified	_EYGIFNQKI_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL;ENST00000530336.2_1_14:51390668-51411121:-|nuORF	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2968627810478	2	556.292756	1110.57096	2.6216	0.0014584	2.8887	0.001607	5.5103	0.0030653	556.2948193242574	44.888	0.37658	46.254	46.088	46.464	1.3653					28	11	3	0	0	0	0.026628	2	18808	18808;18857		92.822	49.308	1	5779200			4624	1284	2333	2346	5572;5573	5572					0.02009725614720992
EYGIFNQKI	9	Unmodified	_EYGIFNQKI_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL;ENST00000530336.2_1_14:51390668-51411121:-|nuORF	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2936279177666	2	556.292756	1110.57096	2.1755	0.0012102	0.57554	0.00032017	2.751	0.0015304	556.2927940337021	44.28	0.53834	46.224	46.053	46.592	1.9438					42	16	4	0	0	0	0.026628	2	18556	18556;18605		92.822	45.486	1	5174200			4625	1284	2333	2346	5574;5575	5574					0.02009725614720992
EYGILNFNK	9	Unmodified	_EYGILNFNK_					0	0	0			REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.5265380740166	3	366.525713	1096.55531	-0.15694	-5.7521E-05	2.306	0.00084522	2.1491	0.0007877	366.52652384266844	14.539	0.33858	15.436	15.312	15.651	0.89664					15	13	2	0	0	0	0.70108	1	6040	6040		4.5289	0.33936	1	605140	+		4626	15530	2334	2347	5576	5576					0.010894390976545765
EYGILNFNK	9	Unmodified	_EYGILNFNK_					0	0	0			REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	366.525713	1096.55531	-0.96129	-0.00035234	3.1674	0.0011609	2.2061	0.0008086	366.5268761425327	14.672	0.41044	15.441	15.233	15.643	0.76937	0.0027969	0.00051264	NaN	4.5289	22	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	694030	+		4627	15530	2334	2347							0.010894390976545765
EYGILNFNK	9	Unmodified	_EYGILNFNK_					0	0	0			REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	366.525713	1096.55531	-0.15694	-5.7521E-05	2.306	0.00084522	2.1491	0.0007877	366.52652384266844	14.539	0.33858	15.436	15.312	15.651	0.89664	-0.0027969	-0.00043448	NaN	4.5289	15	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	605140	+		4628	15530	2334	2347							0.010894390976545765
EYGKFFVTL	9	Unmodified	_EYGKFFVTL_					0	0	0		ENST00000575656.5_1_16:24960717-24971282:-|nuORF;ARHGAP17|p.S762Qfs*22|1|0.08|ENSG00000140750|chr16:24931015-24931016|-/G|frameshift_variant;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;ENSG00000140750|ENST00000289968|ARHGAP17	ENST00000575656.5_1_16:24960717-24971282:-|nuORF	ENST00000575656.5_1_16:24960717-24971282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2937499880791	2	552.292225	1102.5699	2.7488	0.0015182	-1.4866	-0.00082104	1.2622	0.00069712	552.2920054946378	62.493	0.6426	63.906	63.583	64.226	1.4134					75	20	5	0	0	0	0.026734	3	26182	26182;26221;26273		92.653	0	1	83089000			4629	72	2335	2348	5577;5578;5579	5577					0.02271511245817237
EYGKFFVTL	9	Unmodified	_EYGKFFVTL_					0	0	0		ENST00000575656.5_1_16:24960717-24971282:-|nuORF;ARHGAP17|p.S762Qfs*22|1|0.08|ENSG00000140750|chr16:24931015-24931016|-/G|frameshift_variant;nc|ENSG00000140750|Q68EM7-2|ARHGAP17;nc|ENSG00000140750|Q68EM7-6|ARHGAP17;nc|ENSG00000140750|Q68EM7-5|ARHGAP17;ENSG00000140750|ENST00000289968|ARHGAP17	ENST00000575656.5_1_16:24960717-24971282:-|nuORF	ENST00000575656.5_1_16:24960717-24971282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2936279177666	2	552.292225	1102.5699	2.7411	0.0015139	-0.96782	-0.00053452	1.7733	0.00097938	552.29209706138	61.91	0.67306	63.867	63.594	64.267	1.9571					64	21	5	0	0	0	0.033102	1	25910	25910		82.529	0	1	61184000			4630	72	2335	2348	5580	5580					0.02271511245817237
EYGKVEFVF	9	Unmodified	_EYGKVEFVF_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1;ENST00000479185.1_1_2:218746916-218750490:-|nuORF;nc|ENSG00000079308|Q9HBL0-2|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2822143435478	2	559.281857	1116.54916	1.3355	0.00074692	-1.0758	-0.00060168	0.25967	0.00014523	559.2811567333404	57.135	0.51287	58.55	58.307	58.82	1.4145					37	17	3	0	0	0	0.033102	3	23962	23897;23962;24018		82.529	40.69	1	5642300			4631	988	2336	2349	5581;5582;5583	5582					-0.004450791338513227
EYGKVEFVF	9	Unmodified	_EYGKVEFVF_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1;ENST00000479185.1_1_2:218746916-218750490:-|nuORF;nc|ENSG00000079308|Q9HBL0-2|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2827026247978	2	559.281857	1116.54916	0.89345	0.00049969	0.060736	3.3968E-05	0.95419	0.00053366	559.2818590562075	56.564	0.44846	58.532	58.334	58.782	1.9684					34	14	3	0	0	0	0.040497	2	23728	23728;23780		75.761	33.921	1	6799300			4632	988	2336	2349	5584;5585	5584					-0.004450791338513227
EYGKVEFVF	9	Unmodified	_EYGKVEFVF_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1;ENST00000479185.1_1_2:218746916-218750490:-|nuORF;nc|ENSG00000079308|Q9HBL0-2|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	559.281857	1116.54916	1.129	0.00063143	-0.3543	-0.00019816	0.77469	0.00043327	559.2817029465676	56.227	0.092907	58.195	58.117	58.21	1.9684	-0.17726	0.00068616	NaN	82.529	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12479000			4633	988	2336	2349							-0.004450791338513227
EYGPIHILW	9	Unmodified	_EYGPIHILW_					0	0	0		nc|ENSG00000162627|Q9UNH6-2|SNX7;nc|ENSG00000162627|Q9UNH6|SNX7;ENSG00000162627|ENST00000306121|SNX7	nc|ENSG00000162627|Q9UNH6-2|SNX7	nc|ENSG00000162627|Q9UNH6-2|SNX7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.2993652224541	2	564.297842	1126.58113	2.7234	0.0015368	-0.56298	-0.00031769	2.1604	0.0012191	564.2976927948953	69.903	0.53071	71.257	70.99	71.521	1.3536					48	16	4	0	0	0	0.030843	3	29296	29296;29341;29389		86.121	47.97	1	13802000			4634	3633	2337	2350	5586;5587;5588	5586					0.022903333399654002
EYGPIHILW	9	Unmodified	_EYGPIHILW_					0	0	0		nc|ENSG00000162627|Q9UNH6-2|SNX7;nc|ENSG00000162627|Q9UNH6|SNX7;ENSG00000162627|ENST00000306121|SNX7	nc|ENSG00000162627|Q9UNH6-2|SNX7	nc|ENSG00000162627|Q9UNH6-2|SNX7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2994262576103	2	564.297842	1126.58113	1.9776	0.001116	-0.073177	-4.1293E-05	1.9044	0.0010747	564.2977761326172	69.331	0.56734	71.184	70.948	71.515	1.853					49	17	4	0	0	0	0.030843	3	29056	29056;29094;29132		86.121	47.97	1	9860900			4635	3633	2337	2350	5589;5590;5591	5589					0.022903333399654002
EYGSIIAFF	9	Unmodified	_EYGSIIAFF_					0	0	0		NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1046.523120105267	1	1046.51932	1045.51205	4.0152	0.004202	-0.39836	-0.00041689	3.6168	0.0037851	1046.519465293493	91.375	0.44189	92.357	92.102	92.544	0.98156					20	13	2	0	0	0	0.03795	3	38481	38437;38481;38519		77.984	47.348	1	4588400			4636	2323	2338	2351	5592;5593;5594	5593					-0.008887506796099842
EYGSIIAFF	9	Unmodified	_EYGSIIAFF_					0	0	0		NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1046.524218738079	1	1046.51932	1045.51205	4.6368	0.0048525	-1.2138	-0.0012703	3.423	0.0035822	1046.5191175428486	90.932	0.44444	92.298	92.06	92.504	1.366					25	13	3	0	0	0	0.051699	2	38297	38250;38297		67.344	36.707	1	3461400			4637	2323	2338	2351	5595;5596	5596					-0.008887506796099842
EYGVHWNFF	9	Unmodified	_EYGVHWNFF_					0	0	0		ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7704955935478	2	599.769448	1197.52434	2.4021	0.0014407	-1.4915	-0.00089455	0.9106	0.00054615	599.768456305838	69.599	0.3112	70.965	70.817	71.128	1.3657					20	9	3	0	0	0	0.042029	1	29217	29217		74.423	45.936	1	2142400			4638	5471	2339	2352	5597	5597					-0.06651714216604887
EYGVHWNFF	9	Unmodified	_EYGVHWNFF_					0	0	0		ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	ENSG00000277161|ENST00000614443|PIGW	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.7700683474541	2	599.769448	1197.52434	1.3194	0.00079132	-1.3267	-0.00079573	-0.0073586	-4.4135E-06	599.7686139028206	69.014	0.39287	70.867	70.679	71.072	1.853					26	12	3	0	0	0	0.018723	1	28969	28969		100.37	69.735	1	2204000			4639	5471	2339	2352	5598	5598					-0.06651714216604887
EYHFHREHF	9	Unmodified	_EYHFHREHF_					0	0	0			REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.2947875857353	2	651.294153	1300.57375	2.0367	0.0013265	1.2921	0.00084151	3.3287	0.002168	651.2952543617282	40.157	0.89006	41.468	40.746	41.637	1.3102					45	29	2	0	0	0	0.59203	1	16777	16777		11.64	0.81637	1	789950	+		4640	9079	2340	2353	5599	5599					-0.0645100620777157
EYHFHREHF	9	Unmodified	_EYHFHREHF_					0	0	0			REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	REV__nc|ENSG00000102760|Q9H4X1-2|RGCC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	651.2967407107353	2	651.294153	1300.57375	1.2539	0.00081669	2.5707	0.0016743	3.8246	0.002491	651.2961410842827	38.705	1.0781	40.541	39.959	41.037	1.8366					46	33	2	0	0	0	0.59203	1	16218	16218		11.64	1.5664	1	616480	+		4641	9079	2340	2353	5600	5600					-0.0645100620777157
EYHPFKSNLVG	11	Unmodified	_EYHPFKSNLVG_					0	0	0			REV__nc|ENSG00000172009|P52888-2|THOP1	REV__nc|ENSG00000172009|P52888-2|THOP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887817263603	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.17	1	29.945	29.445	30.445	1.7754								0	0	0	0.63775	1	11793	11793		0.50596	0	1		+		4642	14490	2341	2354	5601	5601					0.0072018456346540916
EYHVKLEKMN	10	Unmodified	_EYHVKLEKMN_					0	0	0			REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881713747978	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.633	1	16.673	16.173	17.173	1.0392								0	0	0	0.66161	1	6486	6486		1.7423	1.2878	1		+		4643	8462	2342	2355	5602	5602					0.010571113458127002
EYIHALTLL	9	Unmodified	_EYIHALTLL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;CALD1-EXOC4|1|fusion;ENST00000466000.1_1_7:133694942-133749278:+|nuORF	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8072997927666	2	536.8055	1071.59645	3.0584	0.0016417	-0.16708	-8.969E-05	2.8913	0.0015521	536.8053090734084	63.092	0.37712	64.506	64.314	64.691	1.4134					21	11	2	0	0	0	0.086433	1	26432	26432		70.716	30.758	1	3751700			4644	2496	2343	2356	5603	5603					0.06351200137146407
EYIIEYPHF	9	Unmodified	_EYIIEYPHF_					0	0	0		ENSG00000112992|ENST00000344920|NNT;SUMF1-NNT|1|fusion;SUMF1-NNT|2|fusion	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.7956420779228	2	605.792589	1209.57063	3.0767	0.0018638	-0.044909	-2.7206E-05	3.0318	0.0018366	605.7924731571528	61.188	0.49474	62.608	62.281	62.776	1.4196					34	15	3	0	0	0	0.046276	2	25641	25641;25695		70.716	45.316	1	2059900			4645	1802	2344	2357	5604;5605	5604					-0.02577694105161754
EYIIEYPHF	9	Unmodified	_EYIIEYPHF_					0	0	0		ENSG00000112992|ENST00000344920|NNT;SUMF1-NNT|1|fusion;SUMF1-NNT|2|fusion	ENSG00000112992|ENST00000344920|NNT	ENSG00000112992|ENST00000344920|NNT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.7935058474541	2	605.792589	1209.57063	3.3022	0.0020005	-0.79317	-0.0004805	2.5091	0.00152	605.7918812855501	60.623	0.46613	62.588	62.324	62.79	1.9653					32	14	3	0	0	0	0.046276	2	25421	25421;25476		70.716	47.979	1	1437700			4646	1802	2344	2357	5606;5607	5606					-0.02577694105161754
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	390.2294494509697	3	390.229008	1167.66519	1.697	0.0006622	-0.14606	-5.6998E-05	1.5509	0.0006052	390.229180718934	47.65	0.82034	49.032	48.726	49.547	1.3825					74	25	5	0	0	0	0.053939	5	19909	19873;19909;19948;19987;20026		53.317	30.659	1	102930000			4647	4951	2345	2358	5608;5609;5610;5611;5612	5609					0.08806864436837714
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8411743044853	2	584.839874	1167.66519	2.2799	0.0013334	-0.94066	-0.00055013	1.3393	0.00078327	584.839657412278	47.655	0.88352	49.038	48.792	49.676	1.3825					77	27	5	0	0	0	3.5988E-05	3	19937	19889;19937;19974		159.1	97.743	1	17553000			4648	4951	2345	2358	5613;5614;5615	5614					0.08806864436837714
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8409301638603	2	584.839874	1167.66519	1.8624	0.0010892	-0.71389	-0.00041751	1.1485	0.0006717	584.8396984121093	47.991	0.50229	49.379	49.241	49.743	1.388					38	15	3	0	0	0	0.037863	3	20118	20069;20118;20161		78.06	43.958	1	2191700			4649	4951	2345	2358	5616;5617;5618	5617					0.08806864436837714
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	390.2297546267509	3	390.229008	1167.66519	1.1549	0.00045069	0.34792	0.00013577	1.5029	0.00058646	390.22913634540225	48.024	1.4907	49.412	49.241	50.731	1.388					105	47	3	0	0	0	0.21592	4	20106	20106;20144;20183;20223		35.612	21.207	1	13696000			4650	4951	2345	2358	5619;5620;5621;5622	5619					0.08806864436837714
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	390.2300292849541	3	390.229008	1167.66519	2.2584	0.00088131	-0.63688	-0.00024853	1.6215	0.00063277	390.22892260138923	47.165	1.8288	49.141	48.87	50.699	1.976					205	58	5	0	0	0	0.099302	8	19767	19691;19728;19767;19806;19846;19886;19935;19974		39.213	25.598	1	110590000			4651	4951	2345	2358	5623;5624;5625;5626;5627;5628;5629;5630	5625					0.08806864436837714
EYIKFLRSI	9	Unmodified	_EYIKFLRSI_					0	0	0		ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2;ENST00000521233.1_1_6:114279792-114292096:-|nuORF	ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8417236208916	2	584.839874	1167.66519	2.4137	0.0014116	-0.37326	-0.0002183	2.0405	0.0011933	584.8398418490343	47.147	1.0874	49.123	48.902	49.989	1.976					97	34	4	0	0	0	2.1584E-05	6	19754	19705;19754;19793;19876;19925;19981		171.46	109.86	1	17178000			4652	4951	2345	2358	5631;5632;5633;5634;5635;5636	5632					0.08806864436837714
EYIPKWEQF	9	Unmodified	_EYIPKWEQF_					0	0	0		ENSG00000114405|ENST00000462069|C3orf14	ENSG00000114405|ENST00000462069|C3orf14	ENSG00000114405|ENST00000462069|C3orf14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.3062011599541	2	620.305864	1238.59717	0.51037	0.00031659	0.38424	0.00023835	0.89461	0.00055493	620.306015355472	51.708	0.40525	53.68	53.457	53.862	1.9722					30	12	3	0	0	0	0.024001	2	21674	21626;21674		96.111	48.362	1	7172100			4653	1863	2346	2359	5637;5638	5638					-0.012580052138218889
EYIPKWEQF	9	Unmodified	_EYIPKWEQF_					0	0	0		ENSG00000114405|ENST00000462069|C3orf14	ENSG00000114405|ENST00000462069|C3orf14	ENSG00000114405|ENST00000462069|C3orf14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	620.305864	1238.59717	0.79417	0.00049263	0.88261	0.00054749	1.6768	0.0010401	620.3063695530457	52.285	0.37542	53.681	53.492	53.867	1.3966	0.00038635	0.00028463	NaN	96.111	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5050900			4654	1863	2346	2359							-0.012580052138218889
EYIPNEGNTL	10	Unmodified	_EYIPNEGNTL_					0	0	0			REV__tr|A0A7D6VTT5|A0A7D6VTT5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03870PE=4SV=1	REV__tr|A0A7D6VTT5|A0A7D6VTT5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03870PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2782470583916	2	575.274761	1148.53497	2.4019	0.0013817	2.9861	0.0017178	5.3879	0.0030995	575.2763668494538	77.718	0.49855	78.999	78.76	79.259	1.2809					24	15	2	0	0	0	0.6819	1	32654	32654		19.257	2.3147	1	1891800	+		4655	15499	2347	2360	5639	5639					-0.03335776352787434
EYIPYCLLKD	10	Unmodified	_EYIPYCLLKD_					0	0	0		tr|A0A7D6ZEV9|A0A7D6ZEV9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12475PE=4SV=1	tr|A0A7D6ZEV9|A0A7D6ZEV9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12475PE=4SV=1	tr|A0A7D6ZEV9|A0A7D6ZEV9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.8157226443291	2	628.815207	1255.61586	2.024	0.0012727	0.92112	0.00057922	2.9452	0.001852	628.8155139335832	63.454	0.35322	65.399	65.152	65.505	1.9444					21	10	3	0	0	0	0.49886	1	26601	26601		27.629	2.2295	1	1664300			4656	17056	2348	2361	5640	5640					-0.0017221163427620922
EYIQFVPLL	9	Unmodified	_EYIQFVPLL_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3181640505791	2	561.3157	1120.61685	4.2187	0.002368	2.2138	0.0012426	6.4325	0.0036106	561.3157051933015	94.468	0.31396	95.209	95.044	95.358	0.74123					18	9	3	0	0	0	0.15635	1	39745	39745		37.974	16.227	1	1140800			4657	4515	2349	2362	5641	5641					0.06136370796957635
EYIQFVPLL	9	Unmodified	_EYIQFVPLL_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3168823122978	2	561.3157	1120.61685	3.2506	0.0018246	0.98158	0.00055097	4.2322	0.0023756	561.3161944162002	94.001	0.31705	95.19	95.017	95.335	1.1887					15	9	2	0	0	0	0.10993	1	39561	39561		46.021	30.174	1	1076800			4658	4515	2349	2362	5642	5642					0.06136370796957635
EYIQNMESI	9	Unmodified	_EYIQNMESI_					0	0	0			REV__nc|ENSG00000163535|Q562F6-2|SGO2	REV__nc|ENSG00000163535|Q562F6-2|SGO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7579833865166	2	563.757889	1125.50123	2.8497	0.0016065	-3.0554	-0.0017225	-0.20573	-0.00011598	563.7561334453666	70.091	0.50006	71.445	71.116	71.616	1.3536					36	15	3	0	0	0	0.04812	1	29400	29400		69.105	19.172	1	3393200	+		4659	10691	2350	2363	5643	5643					-0.056505211161947955
EYIQNMESI	9	Unmodified	_EYIQNMESI_					0	0	0			REV__nc|ENSG00000163535|Q562F6-2|SGO2	REV__nc|ENSG00000163535|Q562F6-2|SGO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7586547732353	2	563.757889	1125.50123	2.5179	0.0014195	-2.6131	-0.0014732	-0.095196	-5.3667E-05	563.7560854191074	69.59	0.47212	71.443	71.199	71.671	1.853					33	14	3	0	0	0	0.10473	1	29178	29178		47.749	7.799	1	3627500	+		4660	10691	2350	2363	5644	5644					-0.056505211161947955
EYIRMVAEW	9	Unmodified	_EYIRMVAEW_					0	0	0		nc|ENSG00000289720|Q96J02-3|ITCH;ENSG00000078747|ENST00000374864|ITCH;nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02-3|ITCH	nc|ENSG00000289720|Q96J02-3|ITCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.7926513552666	2	598.792066	1195.56958	1.6892	0.0010115	-0.83429	-0.00049957	0.8549	0.00051191	598.7915267789999	54.732	0.48816	56.137	55.867	56.355	1.4048					37	15	3	0	0	0	0.014947	2	22888	22838;22888		103.42	73.579	1	3800900			4661	981	2351	2364	5645;5646	5646					-0.02038231745700614
EYIRMVAEW	9	Unmodified	_EYIRMVAEW_					0	0	0		nc|ENSG00000289720|Q96J02-3|ITCH;ENSG00000078747|ENST00000374864|ITCH;nc|ENSG00000289720|Q96J02|ITCH	nc|ENSG00000289720|Q96J02-3|ITCH	nc|ENSG00000289720|Q96J02-3|ITCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.7914916872978	2	598.792066	1195.56958	1.902	0.0011389	-1.0381	-0.00062159	0.86388	0.00051728	598.7912065865977	54.209	0.68005	56.177	55.845	56.525	1.9684					43	21	3	0	0	0	0.010585	3	22651	22651;22699;22772		106.94	80.672	1	3594800			4662	981	2351	2364	5647;5648;5649	5647					-0.02038231745700614
EYIRSLNQF	9	Unmodified	_EYIRSLNQF_					0	0	0		ENST00000591367.5_1_18:21109371-21111665:+|nuORF;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3029052615166	2	585.301113	1168.58767	1.7984	0.0010526	-0.86439	-0.00050593	0.93402	0.00054668	585.3007035474504	38.684	0.32701	39.98	39.805	40.132	1.2961					18	10	2	0	0	0	0.15456	2	16200	16200;16246		38.176	14.155	1	1857200			4663	2960	2352	2365	5650;5651	5650					0.010122265006657472
EYIRSLNQF	9	Unmodified	_EYIRSLNQF_					0	0	0		ENST00000591367.5_1_18:21109371-21111665:+|nuORF;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3029052615166	2	585.301113	1168.58767	0.87306	0.000511	0.9917	0.00058044	1.8648	0.0010914	585.3019316080873	38.043	0.27394	39.863	39.73	40.004	1.8202					15	8	2	0	0	0	0.066197	1	15944	15944		61.602	33.973	1	1899800			4664	2960	2352	2365	5652	5652					0.010122265006657472
EYKIAFPYL	9	Unmodified	_EYKIAFPYL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3078491091728	2	572.307875	1142.6012	2.8704	0.0016427	-0.35887	-0.00020539	2.5115	0.0014373	572.3077351629818	69.879	0.38142	71.716	71.5	71.881	1.8378					24	11	3	0	0	0	0.24063	2	29295	29295;29349		28.487	6.7402	1	2511200			4665	4323	2353	2366	5653;5654	5653					0.0356008427991128
EYKIAFPYL	9	Unmodified	_EYKIAFPYL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	572.307875	1142.6012	2.9734	0.0017017	1.3016	0.00074491	4.275	0.0024466	572.3082994654418	70.395	0.67	71.749	71.491	72.161	1.3536	0.016235	0.0011674	NaN	28.487	44	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2712300			4666	4323	2353	2366							0.0356008427991128
EYLADLYHF	9	Unmodified	_EYLADLYHF_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.7776977419853	2	585.776939	1169.53933	2.903	0.0017005	-3.608	-0.0021135	-0.70505	-0.000413	585.775554040897	63.12	0.34727	64.533	64.344	64.691	1.4134					29	10	3	0	0	0	0.069258	1	26451	26451		60.39	22.416	1	2015700			4667	1238	2354	2367	5655	5655					-0.038662671392330594
EYLADLYHF	9	Unmodified	_EYLADLYHF_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.7776977419853	2	585.776939	1169.53933	2.7855	0.0016317	-3.8982	-0.0022835	-1.1127	-0.00065179	585.7756895537548	62.545	0.4043	64.489	64.284	64.688	1.9444					27	12	3	0	0	0	0.087207	1	26236	26236		53.576	23.351	1	2286000			4668	1238	2354	2367	5656	5656					-0.038662671392330594
EYLCKENLD	9	Unmodified	_EYLCKENLD_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.2991821169853	2	563.757889	1125.50123	2.8497	0.0016065	-3.0554	-0.0017225	-0.20573	-0.00011598	563.7561334453666	70.091	0.50006	71.445	71.116	71.616	1.3536					36	15	3	0	0	0	0.10346	1	29389	29389		21.537	8.4945	1	3393200	+		4669	11176	2355	2368	5657	5657					-0.05650521116217533
EYLDEEDNNN	10	Unmodified	_EYLDEEDNNN_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.7443725466728	2	627.741479	1253.4684	2.3162	0.001454	2.0511	0.0012875	4.3673	0.0027415	627.7432309469444	71.063	0.63325	72.405	72.179	72.812	1.3415					71	20	5	0	0	0	0.78468	2	29811	29811;29862		13.906	0.86358	1	36907000	+		4670	11398	2356	2369	5658;5659	5658					-0.14819056705346156
EYLDRIGQLFF	11	Unmodified	_EYLDRIGQLFF_					0	0	0		nc|ENSG00000239857|Q7L5D6-2|GET4;ENSG00000239857|ENST00000265857|GET4	nc|ENSG00000239857|Q7L5D6-2|GET4	nc|ENSG00000239857|Q7L5D6-2|GET4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	701.3667480349541	2	700.864077	1399.7136	3.4007	0.0023835	-1.612	-0.0011298	1.7888	0.0012537	700.8635642202656	81.974	0.46587	83.186	82.945	83.411	1.2125					31	14	3	0	0	0	0.0080417	2	34375	34375;34429		107.56	65.608	1	3091300			4671	5329	2357	2370	5660;5661	5660					0.029733132860656042
EYLDRIGQLFF	11	Unmodified	_EYLDRIGQLFF_					0	0	0		nc|ENSG00000239857|Q7L5D6-2|GET4;ENSG00000239857|ENST00000265857|GET4	nc|ENSG00000239857|Q7L5D6-2|GET4	nc|ENSG00000239857|Q7L5D6-2|GET4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	700.8658325076103	2	700.864077	1399.7136	2.9895	0.0020952	0.052614	3.6875E-05	3.0421	0.0021321	700.8639334508031	81.465	0.39949	83.161	82.983	83.383	1.6959					31	12	3	0	0	0	0.034474	2	34154	34154;34206		75.571	55.156	1	3492400			4672	5329	2357	2370	5662;5663	5662					0.029733132860656042
EYLEAHLKF	9	Unmodified	_EYLEAHLKF_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3008300662041	2	575.300581	1148.58661	2.2646	0.0013028	0.49621	0.00028547	2.7608	0.0015883	575.3011310732868	39.882	0.21424	41.192	41.055	41.269	1.3102					11	6	2	0	0	0	0.23535	1	16739	16739		29.082	14.243	1	890250			4673	3616	2358	2371	5664	5664					0.018260121317553057
EYLEAHLKF	9	Unmodified	_EYLEAHLKF_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3015014529228	2	575.300581	1148.58661	1.6181	0.0009309	0.028003	1.611E-05	1.6461	0.00094701	575.3006152042341	39.431	0.21579	41.268	41.16	41.376	1.8366					10	6	2	0	0	0	0.44512	1	16542	16542		18.146	8.0724	1	635530			4674	3616	2358	2371	5665	5665					0.018260121317553057
EYLGYPEYI	9	Unmodified	_EYLGYPEYI_					0	0	0		tr|A0A7D6ZVP6|A0A7D6ZVP6_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_05010PE=4SV=1	tr|A0A7D6ZVP6|A0A7D6ZVP6_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_05010PE=4SV=1	tr|A0A7D6ZVP6|A0A7D6ZVP6_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_05010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.8497497439384	3	382.849974	1145.52809	0.96297	0.00036867	0.22694	8.6883E-05	1.1899	0.00045556	382.84990081746184	46.407	0.24415	47.782	47.649	47.893	1.3751					10	7	2	0	0	0	0.67936	1	19451	19451		8.1555	1.9637	1	771770			4675	17156	2359	2372	5666	5666					-0.03885089233358485
EYLIVFPKL	9	Unmodified	_EYLIVFPKL_					0	0	0		ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3405029177666	2	561.333893	1120.65323	2.5834	0.0014502	1.8668	0.0010479	4.4503	0.0024981	561.3351366576194	77.213	0.50949	78.494	78.186	78.695	1.2809					45	15	4	0	0	0	0.049839	3	32350	32350;32396;32437		68.081	33.978	1	8764300			4676	5039	2360	2373	5667;5668;5669	5667					0.09773247693647136
EYLIVFPKL	9	Unmodified	_EYLIVFPKL_					0	0	0		ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	ENSG00000198060|ENST00000358935|MARCHF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3359863162041	2	561.333893	1120.65323	2.3101	0.0012967	1.8587	0.0010433	4.1687	0.00234	561.3351733712171	76.639	0.54385	78.406	78.095	78.639	1.7672					48	16	4	0	0	0	0.04145	3	32150	32101;32150;32208		74.929	41.197	1	6884100			4677	5039	2360	2373	5670;5671;5672	5671					0.09773247693647136
EYLKLETTW	9	Unmodified	_EYLKLETTW_					0	0	0		ENST00000489781.2_1_12:122701002-122701362:-|nuORF;nc|ENSG00000184047|Q9NR28-2|DIABLO;nc|ENSG00000184047|Q9NR28-3|DIABLO;ENSG00000184047|ENST00000464942|DIABLO	ENST00000489781.2_1_12:122701002-122701362:-|nuORF	ENST00000489781.2_1_12:122701002-122701362:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8057739138603	2	591.805697	1181.59684	0.7367	0.00043599	1.4068	0.00083254	2.1435	0.0012685	591.8062558923205	53.147	0.31921	54.548	54.346	54.665	1.4005					20	9	3	0	0	0	0.031145	2	22268	22214;22268		85.642	49.514	1	1754000			4678	4679	2361	2374	5673;5674	5674					0.013305750663448634
EYLKLETTW	9	Unmodified	_EYLKLETTW_					0	0	0		ENST00000489781.2_1_12:122701002-122701362:-|nuORF;nc|ENSG00000184047|Q9NR28-2|DIABLO;nc|ENSG00000184047|Q9NR28-3|DIABLO;ENSG00000184047|ENST00000464942|DIABLO	ENST00000489781.2_1_12:122701002-122701362:-|nuORF	ENST00000489781.2_1_12:122701002-122701362:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.8046752810478	2	591.805697	1181.59684	1.1551	0.00068359	0.37368	0.00022115	1.5288	0.00090474	591.8056179685635	52.56	0.28897	54.532	54.385	54.674	1.9722					20	8	3	0	0	0	0.10473	2	22014	22014;22067		47.749	27.295	1	2084800			4679	4679	2361	2374	5675;5676	5675					0.013305750663448634
EYLKNVLLQF	10	Unmodified	_EYLKNVLLQF_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;ENST00000477523.1_1_2:110602660-110613470:+|nuORF;ENST00000480863.1_1_2:109113406-109124083:+|nuORF;ENSG00000135968|ENST00000309863|GCC2	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.8599731326103	2	633.858264	1265.70197	2.5715	0.00163	-0.0010646	-6.7484E-07	2.5705	0.0016293	633.8588118091467	70.24	0.28337	71.594	71.429	71.712	1.3536					18	8	3	0	0	0	0.050359	1	29466	29466		78.728	51.099	1	1421800			4680	601;2696	2362	2375	5677	5677					0.07975116262764459
EYLKNVLLQF	10	Unmodified	_EYLKNVLLQF_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;ENST00000477523.1_1_2:110602660-110613470:+|nuORF;ENST00000480863.1_1_2:109113406-109124083:+|nuORF;ENSG00000135968|ENST00000309863|GCC2	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8592407107353	2	633.858264	1265.70197	2.2749	0.001442	1.2065	0.00076477	3.4815	0.0022068	633.8582613967493	69.681	0.25147	71.532	71.417	71.668	1.8508					16	7	3	0	0	0	0.066517	1	29245	29245		71.922	37.521	1	1590300			4681	601;2696	2362	2375	5678	5678					0.07975116262764459
EYLKVDAQF	9	Unmodified	_EYLKVDAQF_					0	0	0		ENST00000466052.1_1_1:33256818-33263474:-|nuORF;ENST00000470377.1_1_1:33256708-33272178:-|nuORF;ENST00000481895.5_1_1:33256818-33282875:-|nuORF;YARS|p.L234Wfs*10|1|0.15|ENSG00000134684|chr1:32787061-32787062|-/GCCAG|frameshift_variant;YARS|p.D233Lfs*13|1|0.09|ENSG00000134684|chr1:32787063-32787064|-/CCTGAAGGAAG|frameshift_variant;ENSG00000134684|ENST00000373477|YARS1;PUM1-YARS|1|fusion;PUM1-YARS|2|fusion	ENST00000466052.1_1_1:33256818-33263474:-|nuORF	ENST00000466052.1_1_1:33256818-33263474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.7860595583916	2	556.784764	1111.55498	1.8144	0.0010102	0.52121	0.0002902	2.3356	0.0013004	556.7852712988737	42.408	0.63316	43.748	43.413	44.046	1.3399					44	19	4	0	0	0	0.0037498	2	17793	17744;17793		125.53	73.261	1	8591300			4682	2629	2363	2376	5679;5680	5680					0.0036601937779323634
EYLKVDAQF	9	Unmodified	_EYLKVDAQF_					0	0	0		ENST00000466052.1_1_1:33256818-33263474:-|nuORF;ENST00000470377.1_1_1:33256708-33272178:-|nuORF;ENST00000481895.5_1_1:33256818-33282875:-|nuORF;YARS|p.L234Wfs*10|1|0.15|ENSG00000134684|chr1:32787061-32787062|-/GCCAG|frameshift_variant;YARS|p.D233Lfs*13|1|0.09|ENSG00000134684|chr1:32787063-32787064|-/CCTGAAGGAAG|frameshift_variant;ENSG00000134684|ENST00000373477|YARS1;PUM1-YARS|1|fusion;PUM1-YARS|2|fusion	ENST00000466052.1_1_1:33256818-33263474:-|nuORF	ENST00000466052.1_1_1:33256818-33263474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.7855102419853	2	556.784764	1111.55498	1.6849	0.00093812	0.29769	0.00016575	1.9826	0.0011039	556.7849555832729	41.89	0.44036	43.782	43.573	44.013	1.8927					36	13	4	0	0	0	0.037098	2	17571	17525;17571		78.728	40.754	1	8408000			4683	2629	2363	2376	5681;5682	5682					0.0036601937779323634
EYLLKVNEI	9	Unmodified	_EYLLKVNEI_					0	0	0		ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant;nc|ENSG00000151693|O43150-2|ASAP2;ENSG00000151693|ENST00000281419|ASAP2	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8176147341728	2	560.816064	1119.61758	1.7415	0.00097668	0.95434	0.00053521	2.6959	0.0015119	560.8167919126843	49.14	0.46872	50.531	50.266	50.734	1.391					45	14	4	0	0	0	2.1949E-05	3	20572	20524;20572;20611		171.09	0	1	34416000			4684	81	2364	2377	5683;5684;5685	5684					0.06255165445986677
EYLLKVNEI	9	Unmodified	_EYLLKVNEI_					0	0	0		ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant;nc|ENSG00000151693|O43150-2|ASAP2;ENSG00000151693|ENST00000281419|ASAP2	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8174316287041	2	560.816064	1119.61758	2.1449	0.0012029	1.0143	0.00056883	3.1592	0.0017717	560.8165870834433	49.573	0.49368	50.964	50.704	51.197	1.3911					45	15	4	0	0	0	2.1949E-05	4	20755	20656;20704;20755;20794		171.09	0	1	13013000			4685	81	2364	2377	5686;5687;5688;5689	5688					0.06255165445986677
EYLLKVNEI	9	Unmodified	_EYLLKVNEI_					0	0	0		ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant;nc|ENSG00000151693|O43150-2|ASAP2;ENSG00000151693|ENST00000281419|ASAP2	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8177978396416	2	560.816064	1119.61758	1.9742	0.0011072	0.37966	0.00021292	2.3539	0.0013201	560.8163705936809	48.584	0.40229	50.562	50.39	50.792	1.9772					45	12	5	0	0	0	2.1949E-05	3	20352	20305;20352;20406		171.09	0	1	38827000			4686	81	2364	2377	5690;5691;5692	5691					0.06255165445986677
EYLLKVNEI	9	Unmodified	_EYLLKVNEI_					0	0	0		ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant;nc|ENSG00000151693|O43150-2|ASAP2;ENSG00000151693|ENST00000281419|ASAP2	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	ASAP2|p.I415Cfs*22|1|0.04|ENSG00000151693|chr2:9356260-9356261|-/TGCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8173095583916	2	560.816064	1119.61758	1.7757	0.00099585	0.59555	0.000334	2.3713	0.0013298	560.8162422699747	48.985	0.36858	50.962	50.792	51.161	1.9772					37	11	4	0	0	0	3.8363E-05	3	20509	20466;20509;20563		157.8	0	1	13502000			4687	81	2364	2377	5693;5694;5695	5694					0.06255165445986677
EYLPIGGLAEF	11	Unmodified	_EYLPIGGLAEF_					0	0	0		ENST00000568368.1_1_16:58756047-58768190:-|nuORF;ENST00000492378.1_1_16:58756047-58768228:-|nuORF;ENST00000564400.5_1_16:58750074-58768228:-|nuORF;ENST00000496461.5_1_16:58752244-58768198:-|nuORF;ENSG00000125166|ENST00000245206|GOT2	ENST00000568368.1_1_16:58756047-58768190:-|nuORF	ENST00000568368.1_1_16:58756047-58768190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3165161013603	2	604.813522	1207.61249	2.3391	0.0014147	3.1938	0.0019316	5.5328	0.0033463	604.8159998787127	85.16	0.30284	86.319	86.086	86.389	1.159					15	9	2	0	0	0	0.080685	1	35714	35714		60.074	34.675	1	2229400			4688	2250	2365	2378	5696	5696					0.016988615833724907
EYLPIGGLAEF	11	Unmodified	_EYLPIGGLAEF_					0	0	0		ENST00000568368.1_1_16:58756047-58768190:-|nuORF;ENST00000492378.1_1_16:58756047-58768228:-|nuORF;ENST00000564400.5_1_16:58750074-58768228:-|nuORF;ENST00000496461.5_1_16:58752244-58768198:-|nuORF;ENSG00000125166|ENST00000245206|GOT2	ENST00000568368.1_1_16:58756047-58768190:-|nuORF	ENST00000568368.1_1_16:58756047-58768190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.8155395388603	2	604.813522	1207.61249	2.5944	0.0015691	3.4712	0.0020994	6.0656	0.0036686	604.8156745692804	84.626	0.3363	86.222	86.064	86.401	1.5962					16	10	2	0	0	0	0.11083	1	35483	35483		53.833	32.296	1	1783400			4689	2250	2365	2378	5697	5697					0.016988615833724907
EYLRFLQTI	9	Unmodified	_EYLRFLQTI_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8302490115166	2	591.829506	1181.64446	2.1757	0.0012877	-1.4266	-0.00084432	0.74911	0.00044335	591.8289062607546	65.956	0.36212	67.355	67.184	67.546	1.3989					19	11	2	0	0	0	0.03071	1	27648	27648		86.332	18.251	1	2165200			4690	2180	2366	2379	5698	5698					0.06090274057191891
EYLRFLQTI	9	Unmodified	_EYLRFLQTI_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	591.829506	1181.64446	1.8226	0.0010787	-1.1472	-0.00067893	0.67539	0.00039972	591.8288345754862	65.483	0.31048	67.392	67.218	67.529	1.9085	0.018391	0.00017038	NaN	86.332	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2047600			4691	2180	2366	2379							0.06090274057191891
EYLRMSGIYW	10	Unmodified	_EYLRMSGIYW_					0	0	0		ENST00000489450.1_1_1:76253229-76255866:+|nuORF;ENST00000461653.5_1_1:76253229-76255104:+|nuORF;ENST00000471759.5_1_1:76253229-76255856:+|nuORF;ENSG00000137955|ENST00000319942|RABGGTB	ENST00000489450.1_1_1:76253229-76255866:+|nuORF	ENST00000489450.1_1_1:76253229-76255866:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.3214599490166	2	659.318448	1316.62234	2.1252	0.0014012	0.78811	0.00051961	2.9133	0.0019208	659.3186742848642	63.55	0.36469	64.964	64.816	65.18	1.4134					25	11	3	0	0	0	0.16465	1	26673	26673		53.317	29.296	1	2055200			4692	2803	2367	2380	5699	5699					-0.02330273682855477
EYLRMSGIYW	10	Unmodified	_EYLRMSGIYW_					0	0	0		ENST00000489450.1_1_1:76253229-76255866:+|nuORF;ENST00000461653.5_1_1:76253229-76255104:+|nuORF;ENST00000471759.5_1_1:76253229-76255856:+|nuORF;ENSG00000137955|ENST00000319942|RABGGTB	ENST00000489450.1_1_1:76253229-76255866:+|nuORF	ENST00000489450.1_1_1:76253229-76255866:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.3188964724541	2	659.318448	1316.62234	2.1831	0.0014394	-0.30297	-0.00019976	1.8801	0.0012396	659.3180827490622	62.971	0.36964	64.916	64.752	65.121	1.9444					26	11	3	0	0	0	0.2264	1	26450	26450		45.74	21.719	1	1649900			4693	2803	2367	2380	5700	5700					-0.02330273682855477
EYLSLVARL	9	Unmodified	_EYLSLVARL_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3121826052666	2	532.310949	1062.60735	3.0022	0.0015981	0.97082	0.00051678	3.973	0.0021149	532.311885032181	61.638	0.52646	63.055	62.744	63.27	1.4177					29	13	3	0	0	0	0.019432	2	25886	25840;25886		99.799	35.563	1	5701800			4694	1222	2368	2381	5701;5702	5702					0.07854602511406483
EYLSLVARL	9	Unmodified	_EYLSLVARL_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3124267458916	2	532.310949	1062.60735	2.7146	0.001445	1.0324	0.00054956	3.747	0.0019945	532.3114319422663	61.135	0.33698	63.1	62.85	63.187	1.9653					27	10	3	0	0	0	0.024001	1	25642	25642		96.111	33.538	1	4852500			4695	1222	2368	2381	5703	5703					0.07854602511406483
EYLSRHWLF	9	Unmodified	_EYLSRHWLF_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX;ENST00000423570.5_1_2:85782605-85785723:-|nuORF	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.5493957400322	3	417.548741	1249.62439	0.877	0.00036619	0.22653	9.4586E-05	1.1035	0.00046077	417.54889373059797	52.38	1.2346	53.777	53.395	54.63	1.3966					82	38	4	0	0	0	0.23535	3	21995	21887;21942;21995		23.79	17.714	1	6832900			4696	1924	2369	2382	5704;5705;5706	5706					0.009565231172246058
EYLSRHWLF	9	Unmodified	_EYLSRHWLF_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX;ENST00000423570.5_1_2:85782605-85785723:-|nuORF	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.8195068240166	2	625.819473	1249.62439	0.77434	0.0004846	-0.52167	-0.00032647	0.25267	0.00015813	625.8192215067313	52.393	0.5618	53.789	53.492	54.053	1.3966					31	17	2	0	0	0	0.053939	1	21946	21946		66.457	34.151	1	2356800			4697	1924	2369	2382	5707	5707					0.009565231172246058
EYLSRHWLF	9	Unmodified	_EYLSRHWLF_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX;ENST00000423570.5_1_2:85782605-85785723:-|nuORF	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.5487548708916	3	417.548741	1249.62439	0.96837	0.00040434	-0.15502	-6.4727E-05	0.81335	0.00033961	417.5485742565596	51.701	1.4521	53.673	53.284	54.736	1.9722					103	46	4	0	0	0	0.23535	2	21653	21653;21707		21.59	15.398	1	6982300			4698	1924	2369	2382	5708;5709	5708					0.009565231172246058
EYLSRHWLF	9	Unmodified	_EYLSRHWLF_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX;ENST00000423570.5_1_2:85782605-85785723:-|nuORF	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	625.819473	1249.62439	0.39542	0.00024746	-0.83001	-0.00051944	-0.43459	-0.00027197	625.819105929456	51.689	0.55926	53.661	53.395	53.954	1.9722	-0.064156	-0.00016398	NaN	66.457	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1368400			4699	1924	2369	2382							0.009565231172246058
EYLTQMWHF	9	Unmodified	_EYLTQMWHF_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	627.7451049685478	2	627.784241	1253.55393	2.6124	0.00164	-0.73429	-0.00046097	1.8781	0.0011791	627.7815765693477	70.914	0.1536	72.256	72.179	72.333	1.3417					6	4	2	0	0	0	0.047433	1	29766	29766		48.346	20.717	1	735000			4700	781	2370	2383	5710	5710					-0.06270518262749647
EYLTQMWHF	9	Unmodified	_EYLTQMWHF_					0	0	0		nc|ENSG00000065150|O00410-2|IPO5;ENSG00000065150|ENST00000651721|IPO5;nc|ENSG00000065150|O00410-3|IPO5	nc|ENSG00000065150|O00410-2|IPO5	nc|ENSG00000065150|O00410-2|IPO5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	627.784241	1253.55393	1.1711	0.00073522	-1.4646	-0.00091944	-0.29343	-0.00018421	627.7829877539295	70.448	0.18293	72.286	72.136	72.319	1.8378	0.014971	-0.00048072	NaN	48.346	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503940			4701	781	2370	2383							-0.06270518262749647
EYMAQHLVF	9	Unmodified	_EYMAQHLVF_					0	0	0		ENST00000473429.5_1_1:110591964-110592183:+|nuORF;nc|ENSG00000143093|Q5VSL9-3|STRIP1;ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1	ENST00000473429.5_1_1:110591964-110592183:+|nuORF	ENST00000473429.5_1_1:110591964-110592183:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2761718630791	2	569.273509	1136.53247	2.1861	0.0012445	1.5527	0.00088394	3.7388	0.0021284	569.2743356337392	49.582	0.27708	50.973	50.826	51.103	1.3911					21	8	3	0	0	0	0.24063	1	20763	20763		28.487	14.979	1	1321400			4702	3013	2371	2384	5711	5711					-0.03033903291475326
EYMAQHLVF	9	Unmodified	_EYMAQHLVF_					0	0	0		ENST00000473429.5_1_1:110591964-110592183:+|nuORF;nc|ENSG00000143093|Q5VSL9-3|STRIP1;ENST00000485775.5_1_1:110582506-110596531:+|nuORF;nc|ENSG00000143093|Q5VSL9-2|STRIP1;ENSG00000143093|ENST00000369795|STRIP1	ENST00000473429.5_1_1:110591964-110592183:+|nuORF	ENST00000473429.5_1_1:110591964-110592183:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2754394412041	2	569.273509	1136.53247	1.8095	0.0010301	0.89263	0.00050815	2.7022	0.0015383	569.273751551538	49.012	0.33791	50.989	50.792	51.13	1.9772					23	10	3	0	0	0	0.34572	1	20526	20526		23.148	9.6405	1	1096200			4703	3013	2371	2384	5712	5712					-0.03033903291475326
EYMEHVYLI	9	Oxidation (M)	_EYM(Oxidation (M))EHVYLI_		EYM(1)EHVYLI		EYM(85)EHVYLI	0	0	1		nc|ENSG00000130703|Q9H1P3-2|OSBPL2;ENSG00000130703|ENST00000313733|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.7855102419853	2	606.783907	1211.55326	2.3464	0.0014238	0.036202	2.1967E-05	2.3826	0.0014457	606.7842472257726	44.295	0.44898	45.661	45.451	45.9	1.3653					40	13	4	0	0	0	0.031324	3	18585	18546;18585;18630		85.357	53.051	1	7192400			4704	2451	2372	2385	5713;5714;5715	5714		47			-0.04405357702466972
EYMEHVYLI	9	Oxidation (M)	_EYM(Oxidation (M))EHVYLI_		EYM(1)EHVYLI		EYM(78)EHVYLI	0	0	1		nc|ENSG00000130703|Q9H1P3-2|OSBPL2;ENSG00000130703|ENST00000313733|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.7850219607353	2	606.783907	1211.55326	2.135	0.0012955	-0.49591	-0.00030091	1.6391	0.00099459	606.7839116703789	43.618	0.68624	45.562	45.398	46.084	1.9438					45	21	4	0	0	0	0.03795	2	18334	18281;18334		77.984	45.199	1	5098900			4705	2451	2372	2385	5716;5717	5717		47			-0.04405357702466972
EYMEHVYLI	9	Unmodified	_EYMEHVYLI_					0	0	0		nc|ENSG00000130703|Q9H1P3-2|OSBPL2;ENSG00000130703|ENST00000313733|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.7858154177666	2	598.78645	1195.55835	1.498	0.000897	-1.3697	-0.00082015	0.12834	7.6848E-05	598.78560490569	53.933	0.72609	55.333	55.136	55.862	1.4005					54	23	4	0	0	0	0.0082953	4	22534	22534;22578;22624;22678		109.63	80.548	1	30192000			4706	2451	2372	2386	5718;5719;5720;5721	5718					-0.03161053839835404
EYMEHVYLI	9	Unmodified	_EYMEHVYLI_					0	0	0		nc|ENSG00000130703|Q9H1P3-2|OSBPL2;ENSG00000130703|ENST00000313733|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	nc|ENSG00000130703|Q9H1P3-2|OSBPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.7870361208916	2	598.78645	1195.55835	0.69311	0.00041503	-0.84501	-0.00050598	-0.15189	-9.0951E-05	598.785917613064	53.485	0.45507	55.455	55.203	55.658	1.9697					53	14	5	0	0	0	0.0082953	3	22439	22340;22388;22439		109.63	73.502	1	36135000			4707	2451	2372	2386	5722;5723;5724	5724					-0.03161053839835404
EYMIQEEEWDR	11	Unmodified	_EYMIQEEEWDR_					0	0	0		nc|ENSG00000077522|P35609-2|ACTN2;ENSG00000077522|ENST00000366578|ACTN2	nc|ENSG00000077522|P35609-2|ACTN2	nc|ENSG00000077522|P35609-2|ACTN2	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8866760134697	3	509.885529	1526.63476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.603	1	80.603	80.103	81.103	0								0	0	0	0.63775	1	33563	33563		0.094841	0	1				4708	964	2373	2387	5725	5725					-0.10749326801169445
EYMLEKSFYQF	11	Unmodified	_EYMLEKSFYQF_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	742.8440429568291	2	742.841953	1483.66935	1.6398	0.0012181	0.95127	0.00070664	2.5911	0.0019248	742.8427684740326	63.951	0.35418	65.358	65.112	65.466	1.4071					38	10	5	0	0	0	0.00026557	3	26809	26765;26809;26852		182.24	153.16	1	5613900			4709	656	2374	2388	5726;5727;5728	5727					-0.05313458922410064
EYMLEKSFYQF	11	Unmodified	_EYMLEKSFYQF_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	742.8441039919853	2	742.841953	1483.66935	1.9237	0.001429	0.064841	4.8167E-05	1.9885	0.0014771	743.3434114445108	63.343	0.41468	65.288	65.091	65.505	1.9444					38	12	4	0	0	0	0.00038561	2	26564	26564;26610		179.28	125.88	1	4012600			4710	656	2374	2388	5729;5730	5729					-0.05313458922410064
EYMLQNHVF	9	Unmodified	_EYMLQNHVF_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.7775756716728	2	590.776416	1179.53828	2.7273	0.0016112	-0.94742	-0.00055971	1.7798	0.0010515	590.775961460126	44.836	0.34416	46.201	45.993	46.337	1.3653					26	10	3	0	0	0	0.03795	2	18760	18760;18809		77.984	37.536	1	2815200			4711	5178	2375	2389	5731;5732	5731					-0.04430804779804021
EYMLQNHVF	9	Unmodified	_EYMLQNHVF_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.7772704958916	2	590.776416	1179.53828	2.3006	0.0013592	-0.56482	-0.00033368	1.7358	0.0010255	590.7762043649439	44.2	0.4094	46.144	45.957	46.366	1.9438					31	12	4	0	0	0	0.028763	2	18514	18514;18557		89.427	48.978	1	2873900			4712	5178	2375	2389	5733;5734	5733					-0.04430804779804021
EYMQAQLLL	9	Unmodified	_EYMQAQLLL_					0	0	0		nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	nc|ENSG00000068438|Q9UET6-2|FTSJ1	nc|ENSG00000068438|Q9UET6-2|FTSJ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7919189333916	2	554.788992	1107.56343	1.9682	0.0010919	1.3058	0.00072442	3.2739	0.0018163	554.7894846582908	68.903	0.41536	70.269	70.028	70.443	1.3657					25	12	3	0	0	0	0.22154	1	28920	28920		30.637	7.4881	1	1394500			4713	831	2376	2390	5735	5735					0.013952500227787823
EYMQAQLLL	9	Unmodified	_EYMQAQLLL_					0	0	0		nc|ENSG00000068438|Q9UET6-2|FTSJ1;ENSG00000068438|ENST00000348411|FTSJ1	nc|ENSG00000068438|Q9UET6-2|FTSJ1	nc|ENSG00000068438|Q9UET6-2|FTSJ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7909423708916	2	554.788992	1107.56343	1.9466	0.0010799	0.84621	0.00046947	2.7928	0.0015494	554.7890472087643	68.316	0.38425	70.186	70.01	70.395	1.87					21	11	3	0	0	0	0.22154	1	28671	28671		30.637	11.198	1	1377300			4714	831	2376	2390	5736	5736					0.013952500227787823
EYNEVANLF	9	Unmodified	_EYNEVANLF_					0	0	0		nc|ENSG00000111224|Q9NR21-5|PARP11;nc|ENSG00000111224|Q9NR21-2|PARP11;nc|ENSG00000111224|Q9NR21-1|PARP11;ENSG00000111224|ENST00000228820|PARP11	nc|ENSG00000111224|Q9NR21-5|PARP11	nc|ENSG00000111224|Q9NR21-5|PARP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7596923708916	2	549.758746	1097.50294	1.9123	0.0010513	0.071434	3.9271E-05	1.9837	0.0010906	549.7587443636787	63.687	0.33747	65.095	64.869	65.207	1.4071					19	10	2	0	0	0	0.11669	1	26720	26720		43.772	9.3707	1	2437000			4715	1731	2377	2391	5737	5737					-0.041911440359626795
EYNEVANLF	9	Unmodified	_EYNEVANLF_					0	0	0		nc|ENSG00000111224|Q9NR21-5|PARP11;nc|ENSG00000111224|Q9NR21-2|PARP11;nc|ENSG00000111224|Q9NR21-1|PARP11;ENSG00000111224|ENST00000228820|PARP11	nc|ENSG00000111224|Q9NR21-5|PARP11	nc|ENSG00000111224|Q9NR21-5|PARP11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	549.7976562380791	2	549.758746	1097.50294	2.1866	0.0012021	-0.08534	-4.6917E-05	2.1013	0.0011552	549.7586776790657	63.192	0.31108	65.137	64.905	65.216	1.9444					17	9	2	0	0	0	0.084243	1	26522	26522		32.786	11.249	1	2395700			4716	1731	2377	2391	5738	5738					-0.041911440359626795
EYNILVNFF	9	Unmodified	_EYNILVNFF_					0	0	0		ENST00000564124.5_1_16:48580029-48653834:-|nuORF;ENSG00000102921|ENST00000262384|N4BP1	ENST00000564124.5_1_16:48580029-48653834:-|nuORF	ENST00000564124.5_1_16:48580029-48653834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.7994262576103	2	579.795132	1157.57571	3.7198	0.0021567	2.5995	0.0015072	6.3193	0.0036639	579.7970691888322	96.65	0.14847	96.934	96.837	96.985	0.28442					11	4	3	0	0	0	0.019432	1	40664	40664		99.799	51.453	1	3128500			4717	1405	2378	2392	5739	5739					0.0032260975747249176
EYNILVNFF	9	Unmodified	_EYNILVNFF_					0	0	0		ENST00000564124.5_1_16:48580029-48653834:-|nuORF;ENSG00000102921|ENST00000262384|N4BP1	ENST00000564124.5_1_16:48580029-48653834:-|nuORF	ENST00000564124.5_1_16:48580029-48653834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.2996703982353	2	579.795132	1157.57571	3.2226	0.0018684	2.969	0.0017214	6.1916	0.0035899	579.7965216464971	96.515	0.21869	96.821	96.725	96.944	0.3062					10	6	3	0	0	0	0.019432	1	40603	40603		99.799	59.842	1	2911600			4718	1405	2378	2392	5740	5740					0.0032260975747249176
EYNNIFHTF	9	Unmodified	_EYNNIFHTF_					0	0	0		ENST00000545363.6_1_12:9808558-9809281:+|nuORF	ENST00000545363.6_1_12:9808558-9809281:+|nuORF	ENST00000545363.6_1_12:9808558-9809281:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	593.1586791872978	2	592.772188	1183.52982	1.0031	0.00059461	4.0534	0.0024028	5.0565	0.0029974	592.7744265796323	52.569	0.18753	53.966	53.836	54.023	1.3966					8	5	2	0	0	0	0.11645	1	21984	21984		8.5933	1.304	1	608230			4719	7236	2379	2393	5741	5741					-0.05460035424766829
EYNNIFHTF	9	Unmodified	_EYNNIFHTF_					0	0	0		ENST00000545363.6_1_12:9808558-9809281:+|nuORF	ENST00000545363.6_1_12:9808558-9809281:+|nuORF	ENST00000545363.6_1_12:9808558-9809281:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	592.772188	1183.52982	1.4743	0.00087394	0.88304	0.00052344	2.3574	0.0013974	592.7731594611416	52.06	0.21695	54.032	53.892	54.109	1.9722	0.033412	-0.002	NaN	8.5933	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	887930			4720	7236	2379	2393							-0.05460035424766829
EYPAWFEQF	9	Unmodified	_EYPAWFEQF_					0	0	0		nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;ENSG00000198722|ENST00000635942|UNC13B	nc|ENSG00000198722|O14795|UNC13B	nc|ENSG00000198722|O14795|UNC13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.7700683474541	2	608.769114	1215.52368	3.0452	0.0018538	-1.0888	-0.00066286	1.9563	0.0011909	608.7689574965558	81.118	0.34067	82.352	82.161	82.502	1.2332					21	10	3	0	0	0	0.19075	1	34042	34042		34.102	22.462	1	1226600			4721	5072	2380	2394	5742	5742					-0.07546553656311517
EYPAWFEQF	9	Unmodified	_EYPAWFEQF_					0	0	0		nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;ENSG00000198722|ENST00000635942|UNC13B	nc|ENSG00000198722|O14795|UNC13B	nc|ENSG00000198722|O14795|UNC13B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	608.769114	1215.52368	2.0902	0.0012724	2.0477	0.0012466	4.1379	0.002519	608.770369682578	80.755	0.33776	82.451	82.241	82.578	1.6959	0.049643	0.0029832	NaN	34.102	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1010200			4722	5072	2380	2394							-0.07546553656311517
EYPDRIMNTF	10	Oxidation (M)	_EYPDRIM(Oxidation (M))NTF_		EYPDRIM(1)NTF		EYPDRIM(94)NTF	0	0	1		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.2946655154228	2	651.29517	1300.57579	0.26575	0.00017308	-0.11498	-7.4889E-05	0.15076	9.8191E-05	651.2951791612502	32.901	0.83572	34.179	33.67	34.506	1.2782					108	30	5	0	0	0	0.059954	6	13691	13691;13733;13775;13813;13853;13893		147.24	105.29	1	19998000			4723	4854;5412	2381	2395	5743;5744;5745;5746;5747;5748	5743		82			-0.06247758304857598
EYPDRIMNTF	10	Oxidation (M)	_EYPDRIM(Oxidation (M))NTF_		EYPDRIM(1)NTF		EYPDRIM(94)NTF	0	0	1		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	651.2939330935478	2	651.29517	1300.57579	0.89231	0.00058116	-0.37145	-0.00024192	0.52086	0.00033924	651.2951564812556	32.391	0.96206	34.215	33.669	34.631	1.8246					127	37	5	0	0	0	0.059954	6	13436	13436;13487;13536;13585;13635;13677		151.48	103.89	1	19884000			4724	4854;5412	2381	2395	5749;5750;5751;5752;5753;5754	5749		82			-0.06247758304857598
EYPDRIMNTF	10	Unmodified	_EYPDRIMNTF_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.2998535037041	2	643.297713	1284.58087	1.721	0.0011071	0.11971	7.7006E-05	1.8407	0.0011841	643.2982532622631	45.621	1.7362	46.996	46.347	48.083	1.3751					196	54	6	0	0	0	0.064585	13	19212	18887;18935;18973;19012;19051;19090;19129;19168;19212;19268;19318;19374;19553		166.77	115.14	1	170560000			4725	4854;5412	2381	2396	5755;5756;5757;5758;5759;5760;5761;5762;5763;5764;5765;5766;5767	5763					-0.050034544422260296
EYPDRIMNTF	10	Unmodified	_EYPDRIMNTF_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.2994872927666	2	643.297713	1284.58087	1.6479	0.0010601	0.14883	9.574E-05	1.7967	0.0011558	643.2982946786062	44.953	2.1416	46.912	46.351	48.492	1.9596					220	67	6	0	0	0	0.037866	15	18889	18648;18696;18733;18772;18811;18850;18889;18928;18967;19007;19052;19103;19167;19224;19316		179.28	133.58	1	185570000			4726	4854;5412	2381	2396	5768;5769;5770;5771;5772;5773;5774;5775;5776;5777;5778;5779;5780;5781;5782	5774					-0.050034544422260296
EYPELRGVF	9	Unmodified	_EYPELRGVF_					0	0	0		ENST00000409011.5_2_2:39005336-39005417:+|nuORF	ENST00000409011.5_2_2:39005336-39005417:+|nuORF	ENST00000409011.5_2_2:39005336-39005417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2853271365166	2	555.284931	1108.55531	0.71427	0.00039662	-0.37512	-0.0002083	0.33916	0.00018833	555.2842906311319	51.585	1.0662	52.981	52.171	53.237	1.3966					102	35	4	0	0	0	0.073578	6	21536	21434;21486;21536;21582;21624;21671		58.679	29.293	1	9624500			4727	6375	2382	2397	5783;5784;5785;5786;5787;5788	5785					0.0053743909768400044
EYPELRGVF	9	Unmodified	_EYPELRGVF_					0	0	0		ENST00000409011.5_2_2:39005336-39005417:+|nuORF	ENST00000409011.5_2_2:39005336-39005417:+|nuORF	ENST00000409011.5_2_2:39005336-39005417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2834960818291	2	555.284931	1108.55531	-0.11432	-6.3478E-05	0.75239	0.00041779	0.63808	0.00035431	555.2843900231572	50.954	0.85426	52.929	52.394	53.249	1.9753					90	30	5	0	0	0	0.063746	6	21381	21206;21252;21302;21341;21381;21427		62.573	31.795	1	8654900			4728	6375	2382	2397	5789;5790;5791;5792;5793;5794	5793					0.0053743909768400044
EYPFILDAF	9	Unmodified	_EYPFILDAF_					0	0	0		ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7792236208916	2	557.776408	1113.53826	4.0899	0.0022812	0.19494	0.00010873	4.2848	0.00239	557.7763906597024	95.059	0.34198	95.801	95.582	95.924	0.74124					22	12	2	0	0	0	0.076627	2	39943	39943;39991		57.471	35.725	1	2135600			4729	656	2383	2398	5795;5796	5795					-0.013964815081408233
EYPFILDAF	9	Unmodified	_EYPFILDAF_					0	0	0		ENSG00000039123|ENST00000230640|MTREX;ENST00000503165.5_1_5:54603841-54625205:+|nuORF	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7776977419853	2	557.776408	1113.53826	3.217	0.0017944	-0.36913	-0.00020589	2.8478	0.0015885	557.7763371845917	94.618	0.39772	95.807	95.559	95.957	1.1887					28	12	3	0	0	0	0.22519	2	39821	39772;39821		30.225	12.078	1	1840100			4730	656	2383	2398	5797;5798	5798					-0.013964815081408233
EYPRETFSF	9	Unmodified	_EYPRETFSF_					0	0	0		nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D;ENST00000473682.5_1_1:111740397-111743081:-|nuORF	nc|ENSG00000162777|Q9H6A0-2|DENND2D	nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2725707888603	2	588.272021	1174.52949	2.1294	0.0012527	-1.2448	-0.0007323	0.8846	0.00052038	588.2716490383438	43.885	0.49171	45.239	44.978	45.47	1.3536					40	15	3	0	0	0	0.0070725	3	18381	18333;18381;18431		114.2	58.699	1	6238600			4731	3647	2384	2399	5799;5800;5801	5800					-0.050794551446415426
EYPRETFSF	9	Unmodified	_EYPRETFSF_					0	0	0		nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D;ENST00000473682.5_1_1:111740397-111743081:-|nuORF	nc|ENSG00000162777|Q9H6A0-2|DENND2D	nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2731811404228	2	588.272021	1174.52949	1.9952	0.0011737	-0.1518	-8.9298E-05	1.8434	0.0010844	588.271986306092	43.249	0.44445	45.193	44.982	45.427	1.9438					38	14	4	0	0	0	0.0037498	3	18129	18086;18129;18182		125.53	73.899	1	5659800			4732	3647	2384	2399	5802;5803;5804	5803					-0.050794551446415426
EYQELMNVK	9	Unmodified	_EYQELMNVK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q8BGZ7;ENSG00000205420|ENST00000330722|KRT6A;ENSG00000170465|ENST00000252250|KRT6C;CON__P04259;CON__P48668;CON__P02538;ENSG00000185479|ENST00000252252|KRT6B;CON__P50446	nc|ENSG00000170421|P05787-2|KRT8;CON__P50446	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.2811157107353	2	577.281531	1152.54851	0.89099	0.00051435	0.75173	0.00043396	1.6427	0.00094831	577.2821245569298	28.59	0.24568	29.873	29.701	29.947	1.2825					16	7	3	0	0	0	0.098163	2	11971	11971;12017		49.933	28.186	1	1146300		+	4733	343;352	2385	2400	5805;5806	5805					-0.021662418452251586
EYQELMNVK	9	Unmodified	_EYQELMNVK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q8BGZ7;ENSG00000205420|ENST00000330722|KRT6A;ENSG00000170465|ENST00000252250|KRT6C;CON__P04259;CON__P48668;CON__P02538;ENSG00000185479|ENST00000252252|KRT6B;CON__P50446	nc|ENSG00000170421|P05787-2|KRT8;CON__P50446	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.2817870974541	2	577.281531	1152.54851	0.73047	0.00042168	0.25577	0.00014765	0.98624	0.00056934	577.2812636545772	28.027	0.27405	29.802	29.665	29.939	1.7754					14	8	2	0	0	0	0.057024	1	11728	11728		65.235	36.153	1	1642900		+	4734	343;352	2385	2400	5807	5807					-0.021662418452251586
EYQKVWNLF	9	Unmodified	_EYQKVWNLF_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.8156616091728	2	613.813856	1225.61316	2.3972	0.0014714	0.48312	0.00029655	2.8803	0.001768	613.8143316620678	64.043	1.333	65.45	64.93	66.263	1.4071					151	42	6	0	0	0	0.00020031	8	26819	26782;26819;26858;26897;26936;27006;27059;27142		142.08	107.68	1	124130000			4735	739	2386	2401	5808;5809;5810;5811;5812;5813;5814;5815	5809					0.009377010230764427
EYQKVWNLF	9	Unmodified	_EYQKVWNLF_					0	0	0		ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	ENSG00000059378|ENST00000263549|PARP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.8154174685478	2	613.813856	1225.61316	2.544	0.0015615	0.12666	7.7748E-05	2.6707	0.0016393	613.8141213667933	63.482	1.5303	65.426	64.875	66.405	1.9444					149	48	6	0	0	0	3.3414E-05	8	26687	26561;26609;26648;26687;26731;26785;26836;26918		160.52	108.25	1	116710000			4736	739	2386	2401	5816;5817;5818;5819;5820;5821;5822;5823	5819					0.009377010230764427
EYQYADWMAF	10	Unmodified	_EYQYADWMAF_					0	0	0			REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.8509704470634	3	441.849868	1322.52777	2.3635	0.0010443	0.2235	9.8753E-05	2.587	0.0011431	441.849914678676	45.474	0.51154	46.839	46.563	47.075	1.3653					29	15	2	0	0	0	0.85617	2	19028	19028;19065		6.1918	2.0752	1	1358400	+		4737	15199	2387	2402	5824;5825	5824					-0.12058832224897742
EYQYADWMAF	10	Unmodified	_EYQYADWMAF_					0	0	0			REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.8504821658134	3	441.849868	1322.52777	1.9428	0.00085845	0.060627	2.6788E-05	2.0035	0.00088524	441.8499510364243	44.977	0.53614	46.936	46.671	47.207	1.9596					30	16	2	0	0	0	0.85617	2	18808	18808;18870		6.1918	2.0023	1	1703300	+		4738	15199	2387	2402	5826;5827	5826					-0.12058832224897742
EYQYADWMAF	10	Unmodified	_EYQYADWMAF_					0	0	0			REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	441.849868	1322.52777	2.3635	0.0010443	0.2235	9.8753E-05	2.587	0.0011431	441.849914678676	45.474	0.51154	46.839	46.563	47.075	1.3653	-0.048559	0.0001038	NaN	6.1918	29	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1358400	+		4739	15199	2387	2402							-0.12058832224897742
EYQYADWMAF	10	Unmodified	_EYQYADWMAF_					0	0	0			REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	REV__tr|A0A553SS82|A0A553SS82_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02460PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	441.849868	1322.52777	1.9428	0.00085845	0.060627	2.6788E-05	2.0035	0.00088524	441.8499510364243	44.977	0.53614	46.936	46.671	47.207	1.9596	0.048559	-0.0001121	NaN	6.1918	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1703300	+		4740	15199	2387	2402							-0.12058832224897742
EYSDVLAKL	9	Unmodified	_EYSDVLAKL_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1;AHDC1|p.A620V|1|0.05|ENSG00000126705|chr1:27550257-27550257|G/A|missense_variant	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1400024294853	2	519.279315	1036.54408	2.1595	0.0011214	1.6717	0.00086806	3.8312	0.0019895	519.2807200174766	48.407	0.37124	50.384	50.236	50.607	1.9772					17	11	2	0	0	0	0.10844	1	20242	20242		11.64	9.7961	1	1352900			4741	2311	2388	2403	5828	5828					0.027266170035318282
EYSFEKQEEL	10	Unmodified	_EYSFEKQEEL_					0	0	0		MYO7B|p.E1350Q|1|0.26|ENSG00000169994|chr2:127625446-127625446|G/C|missense_variant	MYO7B|p.E1350Q|1|0.26|ENSG00000169994|chr2:127625446-127625446|G/C|missense_variant	MYO7B|p.E1350Q|1|0.26|ENSG00000169994|chr2:127625446-127625446|G/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	651.2963134646416	2	651.298433	1300.58231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.934	1	43.273	42.773	43.773	1.3399								0	0	0	0.6513	1	17581	17581		13.042	1.5478	1				4742	7805	2389	2404	5829	5829					-0.05595541872435206
EYSFSDRYEKI	11	Unmodified	_EYSFSDRYEKI_					0	0	0			REV__ENST00000424738.1_1_10:117226695-117357303:+|nuORF	REV__ENST00000424738.1_1_10:117226695-117357303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.5640136599541	3	479.561263	1435.66196	1.7615	0.00084474	3.0185	0.0014476	4.78	0.0022923	479.56280667964387	46.034	0.37745	47.409	47.209	47.586	1.3751					28	11	3	0	0	0	1.0131	1	19269	19269		1.2148	0.10508	1	2057700	+		4743	9233	2390	2405	5830	5830					-0.038444751985025505
EYSIVIQQL	9	Unmodified	_EYSIVIQQL_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8011352419853	2	546.800414	1091.58628	1.9109	0.0010449	-1.1977	-0.00065493	0.71318	0.00038997	546.7994633823674	63.722	0.43873	65.129	64.93	65.368	1.4071					36	13	3	0	0	0	0.006164	3	26741	26694;26741;26784		117.6	50.255	1	15705000			4744	5360	2391	2406	5831;5832;5833	5832					0.04414592411899321
EYSIVIQQL	9	Unmodified	_EYSIVIQQL_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1092.597460925579	1	1092.59355	1091.58628	1.7458	0.0019075	0.61746	0.00067464	2.3633	0.0025821	1092.5944771290126	63.745	0.34236	65.152	64.93	65.272	1.4071					21	10	3	0	0	0	0.0058174	1	26726	26726		118.89	33.623	1	1833900			4745	5360	2391	2406	5834	5834					0.04414592411899321
EYSIVIQQL	9	Unmodified	_EYSIVIQQL_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7994872927666	2	546.800414	1091.58628	2.2723	0.0012425	-0.7751	-0.00042382	1.4972	0.00081869	546.7997674869814	63.185	0.59571	65.129	64.814	65.409	1.9444					51	18	4	0	0	0	0.023786	3	26483	26483;26531;26570		96.285	41.967	1	16687000			4746	5360	2391	2406	5835;5836;5837	5835					0.04414592411899321
EYSIVIQQL	9	Unmodified	_EYSIVIQQL_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1092.595629870892	1	1092.59355	1091.58628	2.4529	0.0026801	0.37998	0.00041517	2.8329	0.0030952	1092.5942843296375	63.192	0.31401	65.137	64.965	65.279	1.9444					18	9	2	0	0	0	0.026628	2	26555	26500;26555		92.822	41.498	1	1698600			4747	5360	2391	2406	5838;5839	5839					0.04414592411899321
EYSKEGYKH	9	Unmodified	_EYSKEGYKH_					0	0	0			REV__ENSG00000242852|ENST00000397732|ZNF709	REV__ENSG00000242852|ENST00000397732|ZNF709	MSMS	GG20161007_CRH_Patient100_A02_01	1	570.7656738162041	2	570.769645	1139.52474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.185	1	11.185	10.685	11.685	0								0	0	0	0.42693	1	4619	4619		4.3292	0.38484	1		+		4748	11928	2392	2407	5840	5840					-0.03944339287386356
EYSKQMQRF	9	Unmodified	_EYSKQMQRF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.1979553103447	3	406.197491	1215.57064	-0.17939	-7.2869E-05	0.88362	0.00035893	0.70423	0.00028606	406.1979904735001	15.09	0.2189	15.86	15.738	15.957	0.76937					20	6	4	0	0	0	0.15066	1	6263	6263		38.615	29.863	1	3886500			4749	1970;4951	2393	2408	5841	5841					-0.028520173767901724
EYSKQMQRF	9	Unmodified	_EYSKQMQRF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000463172.5_1_1:32757770-32792715:+|nuORF;ENST00000481281.5_1_1:32757770-32793222:+|nuORF;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.1992980837822	3	406.197491	1215.57064	0.1081	4.3911E-05	0.29704	0.00012066	0.40515	0.00016457	406.1978797313123	14.988	0.21707	15.884	15.773	15.99	0.89664					20	6	4	0	0	0	0.16939	2	6199	6199;6249		36.506	20.357	1	4273400			4750	1970;4951	2393	2408	5842;5843	5842					-0.028520173767901724
EYSYEQFLF	9	Unmodified	_EYSYEQFLF_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.7768432497978	2	613.274229	1224.53391	2.4817	0.0015219	0.63335	0.00038842	3.115	0.0019104	613.274581849245	80.15	0.5001	81.402	81.14	81.64	1.2512					53	15	5	0	0	0	0.033794	3	33589	33589;33636;33684		81.613	57.823	1	14588000			4751	1183	2394	2409	5844;5845;5846	5844					-0.06937990721712595
EYSYEQFLF	9	Unmodified	_EYSYEQFLF_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.2756835818291	2	613.274229	1224.53391	1.3993	0.00085818	0.68431	0.00041967	2.0836	0.0012778	613.2746417614504	79.692	0.49561	81.409	81.167	81.663	1.7167					47	15	4	0	0	0	0.026628	3	33378	33378;33425;33480		92.822	69.674	1	9932700			4752	1183	2394	2409	5847;5848;5849	5847					-0.06937990721712595
EYTAKIALL	9	Unmodified	_EYTAKIALL_					0	0	0		EZR-PARP3|1|fusion;ENSG00000092820|ENST00000367075|EZR	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3007995486259	2	511.30005	1020.58555	1.6463	0.00084173	0.19708	0.00010077	1.8433	0.0009425	511.30013364980647	48.795	0.49274	50.183	49.925	50.418	1.388					41	15	4	0	0	0	0.026836	2	20445	20392;20445		92.491	54.34	1	17210000			4753	7580	2395	2410	5850;5851	5851					0.07607797762852897
EYTAKIALL	9	Unmodified	_EYTAKIALL_					0	0	0		EZR-PARP3|1|fusion;ENSG00000092820|ENST00000367075|EZR	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3009826540947	2	511.30005	1020.58555	2.5642	0.0013111	-0.7283	-0.00037238	1.8359	0.00093868	511.2996532018189	48.245	0.46253	50.222	49.99	50.453	1.9772					38	14	4	0	0	0	0.031145	2	20184	20184;20235		85.642	29.828	1	18314000			4754	7580	2395	2410	5852;5853	5852					0.07607797762852897
EYTDIQGLEW	10	Unmodified	_EYTDIQGLEW_					0	0	0		nc|ENSG00000188010|Q502X0|MORN2;ENSG00000188010|ENST00000644631|MORN2	nc|ENSG00000188010|Q502X0|MORN2	nc|ENSG00000188010|Q502X0|MORN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.2890502810478	2	627.287868	1252.56118	1.5879	0.00099605	-0.10468	-6.5666E-05	1.4832	0.00093039	627.2870733582552	66.634	0.3105	68.023	67.874	68.184	1.3888					25	9	3	0	0	0	0.076926	1	27957	27957		68.081	37.444	1	1852000			4755	4845	2396	2411	5854	5854					-0.054995071813209506
EYTDIQGLEW	10	Unmodified	_EYTDIQGLEW_					0	0	0		nc|ENSG00000188010|Q502X0|MORN2;ENSG00000188010|ENST00000644631|MORN2	nc|ENSG00000188010|Q502X0|MORN2	nc|ENSG00000188010|Q502X0|MORN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.2892333865166	2	627.287868	1252.56118	1.1848	0.00074318	-0.53398	-0.00033496	0.65077	0.00040822	627.2870315793297	66.277	0.28355	68.166	67.994	68.278	1.8889					21	8	3	0	0	0	0.24244	2	27828	27776;27828		43.772	18.717	1	1573200			4756	4845	2396	2411	5855;5856	5856					-0.054995071813209506
EYTDVLQKI	9	Unmodified	_EYTDVLQKI_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7988769412041	2	554.797872	1107.58119	1.6398	0.00090978	0.3041	0.00016872	1.9439	0.0010785	554.7981239186124	46.413	0.75054	47.788	47.493	48.243	1.3751					89	23	5	0	0	0	4.8155E-05	6	19415	19367;19415;19454;19493;19536;19594		152.41	70.799	1	171060000			4757	2477	2397	2412	5857;5858;5859;5860;5861;5862	5858					0.031702885492677524
EYTDVLQKI	9	Unmodified	_EYTDVLQKI_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8010742068291	2	554.797872	1107.58119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.972	1	48.355	47.855	48.855	1.3825								0	0	0	0.3792	1	19671	19671		10.824	2.9138	1				4758	2477	2397	2412	5863	5863					0.031702885492677524
EYTDVLQKI	9	Unmodified	_EYTDVLQKI_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7987548708916	2	554.797872	1107.58119	1.1772	0.00065308	0.8522	0.0004728	2.0294	0.0011259	554.7984259912232	46.018	0.5873	47.988	47.663	48.251	1.9703					77	18	5	0	0	0	0.00020592	4	19241	19193;19241;19293;19332		141.83	60.214	1	144190000			4759	2477	2397	2412	5864;5865;5866;5867	5865					0.031702885492677524
EYTRALFLL	9	Unmodified	_EYTRALFLL_					0	0	0		ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3197509646416	2	563.318774	1124.623	2.0694	0.0011657	0.27408	0.00015439	2.3435	0.0013201	563.3188596816462	67.878	1.1882	69.256	68.946	70.134	1.3778					106	38	5	0	0	0	0.026734	6	28444	28401;28444;28483;28522;28562;28606		92.653	31.296	1	79317000			4760	2412	2398	2413	5868;5869;5870;5871;5872;5873	5869					0.06566889028476908
EYTRALFLL	9	Unmodified	_EYTRALFLL_					0	0	0		ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3199951052666	2	563.318774	1124.623	1.2713	0.00071614	0.26323	0.00014828	1.5345	0.00086442	563.3188598357871	67.29	0.67554	69.16	68.905	69.581	1.8706					75	21	5	0	0	0	0.033102	5	28174	28174;28223;28273;28313;28357		82.529	30.261	1	68206000			4761	2412	2398	2413	5874;5875;5876;5877;5878	5874					0.06566889028476908
EYTRYLFAL	9	Unmodified	_EYTRYLFAL_					0	0	0		nc|ENSG00000006607|O94887-3|FARP2;nc|ENSG00000006607|O94887-2|FARP2;FARP2|p.Y914Tfs*24|1|0.22|ENSG00000006607|chr2:241491632-241491632|T/-|frameshift_variant;ENSG00000006607|ENST00000264042|FARP2	nc|ENSG00000006607|O94887-3|FARP2	nc|ENSG00000006607|O94887-3|FARP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3101684451103	2	588.308406	1174.60226	3.1435	0.0018494	1.5831	0.00093133	4.7266	0.0027807	588.3092434668603	64.728	0.27778	66.135	65.985	66.263	1.4071					15	8	2	0	0	0	0.070055	1	27126	27126		60.074	34.675	1	1082700			4762	510	2399	2414	5879	5879					0.021942986488056704
EYTRYLFAL	9	Unmodified	_EYTRYLFAL_					0	0	0		nc|ENSG00000006607|O94887-3|FARP2;nc|ENSG00000006607|O94887-2|FARP2;FARP2|p.Y914Tfs*24|1|0.22|ENSG00000006607|chr2:241491632-241491632|T/-|frameshift_variant;ENSG00000006607|ENST00000264042|FARP2	nc|ENSG00000006607|O94887-3|FARP2	nc|ENSG00000006607|O94887-3|FARP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3112670779228	2	588.308406	1174.60226	2.5711	0.0015126	1.376	0.00080949	3.947	0.0023221	588.3098367030507	64.177	0.25204	66.105	65.981	66.233	1.928					12	7	2	0	0	0	0.037098	1	26958	26958		78.728	48.092	1	669780			4763	510	2399	2414	5880	5880					0.021942986488056704
EYTSILHLF	9	Unmodified	_EYTSILHLF_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7971679568291	2	561.795132	1121.57571	3.4286	0.0019262	0.25614	0.0001439	3.6847	0.0020701	561.795182075785	74.227	0.57481	75.545	75.342	75.917	1.318					52	18	4	0	0	0	0.052478	3	31161	31119;31161;31200		67.035	36.811	1	14952000			4764	5085	2400	2415	5881;5882;5883	5882					0.019786097574751693
EYTSILHLF	9	Unmodified	_EYTSILHLF_					0	0	0		ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	ENSG00000198799|ENST00000361127|LRIG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7966186404228	2	561.795132	1121.57571	2.9126	0.0016363	0.63986	0.00035947	3.5525	0.0019958	561.7954099060255	73.745	0.64023	75.541	75.317	75.957	1.7962					49	20	4	0	0	0	0.10722	3	30890	30890;30940;30997		46.921	28.786	1	12779000			4765	5085	2400	2415	5884;5885;5886	5884					0.019786097574751693
EYVKFLHKF	9	Unmodified	_EYVKFLHKF_					0	0	0		nc|ENSG00000081665|Q5JVG8-2|ZNF506;ENSG00000081665|ENST00000540806|ZNF506	nc|ENSG00000081665|Q5JVG8-2|ZNF506	nc|ENSG00000081665|Q5JVG8-2|ZNF506	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.2255126833916	3	404.225486	1209.65463	0.37198	0.00015037	0.64342	0.00026009	1.0154	0.00041045	404.22554867160085	30.777	0.93259	32.059	31.811	32.744	1.2825					64	29	3	0	0	0	0.44062	3	13008	12905;12953;13008		18.373	12.97	1	1904200			4766	1022	2401	2416	5887;5888;5889	5889					0.058188817823975114
EYVKFLHKF	9	Unmodified	_EYVKFLHKF_					0	0	0		nc|ENSG00000081665|Q5JVG8-2|ZNF506;ENSG00000081665|ENST00000540806|ZNF506	nc|ENSG00000081665|Q5JVG8-2|ZNF506	nc|ENSG00000081665|Q5JVG8-2|ZNF506	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2253906130791	3	404.225486	1209.65463	0.71138	0.00028756	-0.12899	-5.214E-05	0.5824	0.00023542	404.5598669859728	30.244	0.71222	32.06	31.83	32.543	1.8151					51	22	3	0	0	0	0.37668	2	12658	12658;12712		21.59	8.0715	1	2797500			4767	1022	2401	2416	5890;5891	5890					0.058188817823975114
EYVPFQAECEC	11	Unmodified	_EYVPFQAECEC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_A02_01	1	439.8417846560478	3	439.842385	1316.50532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.313	1	28.313	27.813	28.813	0								0	0	0	0.63766	1	11847	11847		16.275	5.3756	1				4768	1545	2402	2417	5892	5892					-0.14026799684825164
EYVPFQAECEC	11	Unmodified	_EYVPFQAECEC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_A02_01	1	439.8421203494072	3	439.842385	1316.50532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.557	1	28.557	28.057	29.057	0								0	0	0	0.63769	1	11950	11950		12.856	1.3381	1				4769	1545	2402	2417	5893	5893					-0.14026799684825164
EYVPFQAECEC	11	Unmodified	_EYVPFQAECEC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_A02_01	1	439.8431579470634	3	439.842385	1316.50532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.687	1	28.687	28.187	29.187	0								0	0	0	0.6377	1	12005	12005		12.228	0.73288	1				4770	1545	2402	2417	5894	5894					-0.14026799684825164
EYVPFQAECEC	11	Unmodified	_EYVPFQAECEC_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_A02_01	1	439.8429748415947	3	439.842385	1316.50532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.931	1	28.931	28.431	29.431	0								0	0	0	0.63773	1	12109	12109		9.2438	1.6348	1				4771	1545	2402	2417	5895	5895					-0.14026799684825164
EYVRALFDF	9	Unmodified	_EYVRALFDF_					0	0	0		ENSG00000167193|ENST00000300574|CRK;nc|ENSG00000167193|P46108-2|CRK	ENSG00000167193|ENST00000300574|CRK	ENSG00000167193|ENST00000300574|CRK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	580.1808349490166	2	580.292756	1158.57096	1.2647	0.00073391	2.2132	0.0012843	3.4779	0.0020182	580.2938633865243	66.973	0.40363	68.862	68.675	69.078	1.8889					20	12	2	0	0	0	0.015993	1	28087	28087		72.968	34.994	1	1204300			4772	3953	2403	2418	5896	5896					-0.0019827438529773644
EYVSQHLVF	9	Unmodified	_EYVSQHLVF_					0	0	0		NRF1-FAM40B|1|fusion;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;NRF1-FAM40B|2|fusion;ENSG00000128578|ENST00000249344|STRIP2	NRF1-FAM40B|1|fusion	NRF1-FAM40B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2834960818291	2	561.284931	1120.55531	2.6491	0.0014869	-1.6343	-0.00091733	1.0148	0.00056957	561.2837298688673	44.613	0.31342	45.978	45.836	46.149	1.3653					15	9	2	0	0	0	0.59203	1	18695	18695		11.64	0.81637	1	1271000			4773	2372	2404	2419	5897	5897					-0.00014560902332050318
EYVSQHLVF	9	Unmodified	_EYVSQHLVF_					0	0	0		NRF1-FAM40B|1|fusion;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;NRF1-FAM40B|2|fusion;ENSG00000128578|ENST00000249344|STRIP2	NRF1-FAM40B|1|fusion	NRF1-FAM40B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2906982302666	2	561.284931	1120.55531	2.2305	0.0012519	2.2462	0.0012608	4.4767	0.0025127	561.2870191431722	44.022	0.19129	45.966	45.862	46.053	1.9438					8	5	2	0	0	0	0.27148	1	18454	18454		26.884	14.352	1	849980			4774	2372	2404	2419	5898	5898					-0.00014560902332050318
EYVVMTTHF	9	Unmodified	_EYVVMTTHF_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3;ENSG00000022355|ENST00000393943|GABRA1	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7656127810478	2	563.765517	1125.51648	2.3921	0.0013486	-0.12523	-7.0599E-05	2.2668	0.001278	563.764553281371	44.217	0.25657	45.571	45.47	45.727	1.3536					12	7	2	0	0	0	0.042029	1	18536	18536		74.423	42.306	1	1691700			4775	576	2405	2420	5899	5899					-0.04125609528387031
EYVVMTTHF	9	Unmodified	_EYVVMTTHF_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3;ENSG00000022355|ENST00000393943|GABRA1	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	563.765517	1125.51648	2.1185	0.0011944	-1.4009	-0.00078978	0.71765	0.00040458	563.7634088040897	43.618	0.24076	45.562	45.398	45.639	1.9438	-0.0045848	-0.00062848	NaN	74.423	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1403800			4776	576	2405	2420							-0.04125609528387031
EYWAHTRWHHF	11	Unmodified	_EYWAHTRWHHF_					0	0	0		nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	785.8644286990166	2	785.360359	1568.70617	1.4489	0.0011379	0.12241	9.6135E-05	1.5713	0.0012341	785.3596836222183	44.918	0.34911	46.877	46.703	47.052	1.9596					21	10	3	0	0	0	0.95983	1	18844	18844		6.2058	2.9245	1	693270			4777	6068	2406	2421	5900	5900					-0.055439814709870916
EYYRGFTLF	9	Unmodified	_EYYRGFTLF_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.2940551638603	2	598.292756	1194.57096	2.9553	0.0017682	-0.15543	-9.2996E-05	2.7999	0.0016752	598.2924631126717	64.265	0.71286	65.673	65.272	65.985	1.4071					42	22	3	0	0	0	0.032536	3	26915	26915;26964;27019		83.429	50.643	1	11062000			4778	4510	2407	2422	5901;5902;5903	5901					-0.018542743852776766
EYYRGFTLF	9	Unmodified	_EYYRGFTLF_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000569406.5_1_15:74914809-74922221:+|nuORF;ENST00000562078.5_1_15:74917060-74922221:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.2936279177666	2	598.292756	1194.57096	2.9367	0.001757	-0.31231	-0.00018686	2.6244	0.0015702	598.2924617732625	63.727	0.65427	65.655	65.296	65.95	1.928					31	20	3	0	0	0	0.032536	1	26729	26729		83.429	41.334	1	9462700			4779	4510	2407	2422	5904	5904					-0.018542743852776766
EYYRRLLRVLR	11	Unmodified	_EYYRRLLRVLR_					0	0	0		ENSG00000170369|ENST00000304725|CST2	ENSG00000170369|ENST00000304725|CST2	ENSG00000170369|ENST00000304725|CST2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1532165408134	4	384.983493	1535.90486	0.76936	0.00029619	-3.0997	-0.0011933	-2.3303	-0.00089714	385.23375044138123	55.916	0.15348	57.884	57.811	57.964	1.9684					6	4	2	0	0	0	0.14606	1	23439	23439		0.094841	0.011491	1	705690			4780	4140	2408	2423	5905	5905					0.15834859107872035
EYYVKWFQK	9	Unmodified	_EYYVKWFQK_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889343142509	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6285	1	2.6285	2.1285	3.1285	0								0	0	0	0.42693	1	1077	1077		0.26902	0.1097	1		+		4781	9578	2409	2424	5906	5906					0.011222740571838585
EYYYDRQRD	9	Unmodified	_EYYYDRQRD_					0	0	0			REV__tr|A0A7D6W0U6|A0A7D6W0U6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01200PE=4SV=1	REV__tr|A0A7D6W0U6|A0A7D6W0U6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.2877685427666	2	654.286191	1306.55783	1.8034	0.0011799	-0.026435	-1.7296E-05	1.7769	0.0011626	654.287304786906	44.999	0.91794	46.959	46.639	47.556	1.9596					49	28	3	0	0	0	0.61249	1	18843	18843		10.824	0.75	1	809340	+		4782	15583	2410	2425	5907	5907					-0.08318757235360863
EYYYDRQRD	9	Unmodified	_EYYYDRQRD_					0	0	0			REV__tr|A0A7D6W0U6|A0A7D6W0U6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01200PE=4SV=1	REV__tr|A0A7D6W0U6|A0A7D6W0U6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01200PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	654.286191	1306.55783	1.9495	0.0012755	-1.0216	-0.00066842	0.92792	0.00060712	654.7863225179983	45.541	0.89408	46.916	46.283	47.177	1.3751	-0.021493	-0.00064825	NaN	10.824	46	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	733120	+		4783	15583	2410	2425							-0.08318757235360863
FAADIISVL	9	Unmodified	_FAADIISVL_					0	0	0		ENST00000435761.5_1_3:184018386-184019655:+|nuORF;ENST00000463602.1_1_3:184018386-184019571:+|nuORF;ENST00000487475.5_1_3:184017042-184019447:+|nuORF;ENST00000459910.5_1_3:184017042-184019571:+|nuORF;ENST00000451892.1_1_1:240307909-240308467:-|nuORF;PSMD2|p.D468Efs*13|1|0.03|ENSG00000175166|chr3:184304026-184304027|-/AGGGACAG|frameshift_variant;PSMD2|p.Y469Wfs*16|1|0.02|ENSG00000175166|chr3:184304028-184304029|-/GGGGGAGTTCTAGGGAAGCA|frameshift_variant;PSMD2|p.M477Ffs*9|1|0.12|ENSG00000175166|chr3:184304050-184304051|-/TTTTGTGAATGGCTTTGTGAATG|frameshift_variant;ENSG00000175166|ENST00000310118|PSMD2	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	474.7748596072197	2	474.773668	947.532783	2.8676	0.0013615	-0.0032087	-1.5234E-06	2.8644	0.0013599	474.77365810574446	82.991	0.52486	84.203	83.951	84.476	1.2125					49	16	4	0	0	0	0.061246	2	34844	34793;34844		63.563	6.0915	1	14431000			4784	4357	2411	2426	5908;5909	5909					0.056918397000458754
FAADIISVL	9	Unmodified	_FAADIISVL_					0	0	0		ENST00000435761.5_1_3:184018386-184019655:+|nuORF;ENST00000463602.1_1_3:184018386-184019571:+|nuORF;ENST00000487475.5_1_3:184017042-184019447:+|nuORF;ENST00000459910.5_1_3:184017042-184019571:+|nuORF;ENST00000451892.1_1_1:240307909-240308467:-|nuORF;PSMD2|p.D468Efs*13|1|0.03|ENSG00000175166|chr3:184304026-184304027|-/AGGGACAG|frameshift_variant;PSMD2|p.Y469Wfs*16|1|0.02|ENSG00000175166|chr3:184304028-184304029|-/GGGGGAGTTCTAGGGAAGCA|frameshift_variant;PSMD2|p.M477Ffs*9|1|0.12|ENSG00000175166|chr3:184304050-184304051|-/TTTTGTGAATGGCTTTGTGAATG|frameshift_variant;ENSG00000175166|ENST00000310118|PSMD2	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5419189333916	1	948.54006	947.532783	2.2365	0.0021214	0.75218	0.00071347	2.9886	0.0028349	948.5406799814609	82.995	0.52486	84.208	83.951	84.476	1.2125					49	16	4	0	0	0	0.11478	1	34842	34842		44.407	4.4497	1	35106000			4785	4357	2411	2426	5910	5910					0.056918397000458754
FAADIISVL	9	Unmodified	_FAADIISVL_					0	0	0		ENST00000435761.5_1_3:184018386-184019655:+|nuORF;ENST00000463602.1_1_3:184018386-184019571:+|nuORF;ENST00000487475.5_1_3:184017042-184019447:+|nuORF;ENST00000459910.5_1_3:184017042-184019571:+|nuORF;ENST00000451892.1_1_1:240307909-240308467:-|nuORF;PSMD2|p.D468Efs*13|1|0.03|ENSG00000175166|chr3:184304026-184304027|-/AGGGACAG|frameshift_variant;PSMD2|p.Y469Wfs*16|1|0.02|ENSG00000175166|chr3:184304028-184304029|-/GGGGGAGTTCTAGGGAAGCA|frameshift_variant;PSMD2|p.M477Ffs*9|1|0.12|ENSG00000175166|chr3:184304050-184304051|-/TTTTGTGAATGGCTTTGTGAATG|frameshift_variant;ENSG00000175166|ENST00000310118|PSMD2	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5444213747978	1	948.54006	947.532783	3.164	0.0030012	1.0788	0.0010233	4.2428	0.0040245	948.5411153493965	82.519	0.52239	84.189	83.892	84.415	1.67					48	16	4	0	0	0	0.046276	3	34643	34557;34643;34685		70.716	6.4792	1	29375000			4786	4357	2411	2426	5911;5912;5913	5912					0.056918397000458754
FAADIISVL	9	Unmodified	_FAADIISVL_					0	0	0		ENST00000435761.5_1_3:184018386-184019655:+|nuORF;ENST00000463602.1_1_3:184018386-184019571:+|nuORF;ENST00000487475.5_1_3:184017042-184019447:+|nuORF;ENST00000459910.5_1_3:184017042-184019571:+|nuORF;ENST00000451892.1_1_1:240307909-240308467:-|nuORF;PSMD2|p.D468Efs*13|1|0.03|ENSG00000175166|chr3:184304026-184304027|-/AGGGACAG|frameshift_variant;PSMD2|p.Y469Wfs*16|1|0.02|ENSG00000175166|chr3:184304028-184304029|-/GGGGGAGTTCTAGGGAAGCA|frameshift_variant;PSMD2|p.M477Ffs*9|1|0.12|ENSG00000175166|chr3:184304050-184304051|-/TTTTGTGAATGGCTTTGTGAATG|frameshift_variant;ENSG00000175166|ENST00000310118|PSMD2	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	ENST00000435761.5_1_3:184018386-184019655:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	474.7754699587822	2	474.773668	947.532783	3.1485	0.0014948	0.83111	0.00039459	3.9796	0.0018894	474.7740373771145	82.488	0.52531	84.158	83.954	84.48	1.67					47	16	4	0	0	0	0.087207	1	34593	34593		53.576	5.2297	1	41782000			4787	4357	2411	2426	5914	5914					0.056918397000458754
FAADMPAS	8	Unmodified	_FAADMPAS_					0	0	0			REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1789428591728	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.717	1	27.717	27.217	28.217	0								0	0	0	1.0178	1	11594	11594		2.5775	0	1		+		4788	13647	2412	2427	5915	5915					-0.06929770233830368
FAADMPAS	8	Unmodified	_FAADMPAS_					0	0	0			REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1794921755791	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.86	1	37.86	37.36	38.36	0								0	0	0	1.0178	1	15870	15870		2.5775	0	1		+		4789	13647	2412	2427	5916	5916					-0.06929770233830368
FAADMPAS	8	Unmodified	_FAADMPAS_					0	0	0			REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1791869997978	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.363	1	23.539	23.039	24.039	1.177								0	0	0	1.0178	1	9345	9345		2.3027	0	1		+		4790	13647	2412	2427	5917	5917					-0.06929770233830368
FAADMPAS	8	Unmodified	_FAADMPAS_					0	0	0			REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	REV__ENST00000524089.1_1_16:89238206-89251879:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1779968142509	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.426	1	18.729	18.229	19.229	1.3023								0	0	0	1.0178	1	7238	7238		2.5775	0	1		+		4791	13647	2412	2427	5918	5918					-0.06929770233830368
FAAFFSHIL	9	Unmodified	_FAAFFSHIL_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A;ENST00000549185.5_3_14:31803609-31872202:-|nuORF	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7839843630791	2	526.781828	1051.5491	2.8965	0.0015258	1.1795	0.00062133	4.0759	0.0021471	526.7823165702353	75.114	0.33742	76.42	76.247	76.585	1.3063					22	10	3	0	0	0	0.09539	1	31532	31532		50.855	32.72	1	1546400			4792	2405	2413	2428	5919	5919					0.025389656568222563
FAAFFSHIL	9	Unmodified	_FAAFFSHIL_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A;ENST00000549185.5_3_14:31803609-31872202:-|nuORF	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.2435790896416	2	526.781828	1051.5491	2.9516	0.0015549	3.5031	0.0018454	6.4548	0.0034003	526.7831610255722	74.618	0.2211	76.4	76.292	76.513	1.7817					15	6	3	0	0	0	0.060741	1	31325	31325		42.095	29.563	1	1156000			4793	2405	2413	2428	5920	5920					0.025389656568222563
FAAHHVTGF	9	Unmodified	_FAAHHVTGF_					0	0	0			REV__tr|A0A553SRA6|A0A553SRA6_NIACIRing-cleavingdioxygenaseOS=NialliacirculansOX=1397GN=CEQ21_00550PE=4SV=1	REV__tr|A0A553SRA6|A0A553SRA6_NIACIRing-cleavingdioxygenaseOS=NialliacirculansOX=1397GN=CEQ21_00550PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	329.5014831423759	3	329.49961	985.477	2.3731	0.00078194	3.1539	0.0010392	5.5271	0.0018212	329.5005929458197	82.547	0.34002	84.217	84.017	84.358	1.67					25	10	3	0	0	0	0.48482	1	34602	34602		16.149	3.6176	1	1726700	+		4794	15151	2414	2429	5921	5921					-0.01631948696899599
FAAHHVTGF	9	Unmodified	_FAAHHVTGF_					0	0	0			REV__tr|A0A553SRA6|A0A553SRA6_NIACIRing-cleavingdioxygenaseOS=NialliacirculansOX=1397GN=CEQ21_00550PE=4SV=1	REV__tr|A0A553SRA6|A0A553SRA6_NIACIRing-cleavingdioxygenaseOS=NialliacirculansOX=1397GN=CEQ21_00550PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	329.49961	985.477	2.3731	0.00078194	3.1539	0.0010392	5.5271	0.0018212	329.5005929458197	82.547	0.34002	84.217	84.017	84.358	1.67	0.001143	-1.6404E-06	NaN	16.149	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1726700	+		4795	15151	2414	2429							-0.01631948696899599
FAAHLSQKFWL	11	Unmodified	_FAAHLSQKFWL_					0	0	0			REV__ENST00000220592.9_2_8:141538766-141538952:-|nuORF	REV__ENST00000220592.9_2_8:141538766-141538952:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9120666384697	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.862	1	11.623	11.123	12.123	0.76165								0	0	0	0.63775	1	4514	4514		0.094841	0	1		+		4796	12081	2415	2430	5922	5922					0.0540535807674587
FAAVTKAKIK	10	Unmodified	_FAAVTKAKIK_					0	0	0		tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8442260622978	2	538.844959	1075.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.457	1	11.457	10.957	11.957	0								0	0	0	0.66052	1	4733	4733		3.5965	1.5367	1				4797	16248	2416	2431	5923	5923					0.14055472162067417
FAAVTKAKIK	10	Unmodified	_FAAVTKAKIK_					0	0	0		tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8439208865166	2	538.844959	1075.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.573	1	11.573	11.073	12.073	0								0	0	0	0.64816	1	4782	4782		15.847	5.0233	1				4798	16248	2416	2431	5924	5924					0.14055472162067417
FAAVTKAKIK	10	Unmodified	_FAAVTKAKIK_					0	0	0		tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8429443240166	2	538.844959	1075.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.786	1	11.786	11.286	12.286	0								0	0	0	0.65836	1	4873	4873		6.7232	3.1267	1				4799	16248	2416	2431	5925	5925					0.14055472162067417
FAAVTKAKIK	10	Unmodified	_FAAVTKAKIK_					0	0	0		tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	tr|A0A553SJH5|A0A553SJH5_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8429443240166	2	538.844959	1075.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.916	1	11.916	11.416	12.416	0								0	0	0	0.65836	1	4928	4928		6.7232	3.1267	1				4800	16248	2416	2431	5926	5926					0.14055472162067417
FAAVTMPFP	9	Unmodified	_FAAVTMPFP_					0	0	0		ENST00000397682.7_1_21:47737957-47742843:-|nuORF;ENST00000445935.5_2_21:47737957-47742843:-|nuORF	ENST00000397682.7_1_21:47737957-47742843:-|nuORF	ENST00000397682.7_1_21:47737957-47742843:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.7484008669853	2	490.749139	979.483725	1.7466	0.00085715	-2.6623	-0.0013065	-0.91567	-0.00044936	490.74806177855635	46.182	0.28128	46.182	46.04	46.321	0					13	8	2	0	0	0	0.46905	1	19310	19310		16.942	1.0951	1	651010			4801	6314	2417	2432	5927	5927					-0.006837718605652299
FACDAIYSV	9	Unmodified	_FACDAIYSV_					0	0	0			REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	330.8199645876884	3	330.152999	987.437169	0.89047	0.00029399	1.2266	0.00040497	2.1171	0.00069896	330.1536302851581	68.131	0.49463	69.509	69.242	69.737	1.3778					23	15	2	0	0	0	0.11685	1	28580	28580		8.7454	1.4562	1	3174800	+		4802	10100	2418	2433	5928	5928					-0.05705256482497134
FACDAIYSV	9	Unmodified	_FACDAIYSV_					0	0	0			REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	330.8198730349541	3	330.152999	987.437169	1.2108	0.00039974	0.65755	0.00021709	1.8683	0.00061684	330.1536415065048	67.634	0.43694	69.504	69.299	69.736	1.87					22	13	2	0	0	0	0.11492	1	28383	28383		8.7454	0.83525	1	3020100	+		4803	10100	2418	2433	5929	5929					-0.05705256482497134
FADFGEWSM	9	Unmodified	_FADFGEWSM_					0	0	0		ENST00000460567.5_1_3:67425855-67425930:-|nuORF	ENST00000460567.5_1_3:67425855-67425930:-|nuORF	ENST00000460567.5_1_3:67425855-67425930:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.3173705935478	2	545.220943	1088.42733	1.4881	0.00081134	-2.129	-0.0011608	-0.64092	-0.00034944	545.2193094108583	71.759	0.31207	73.1	72.936	73.248	1.3415					12	9	2	0	0	0	0.11645	1	30127	30127		4.756	1.8668	1	541290			4804	6666	2419	2434	5930	5930					-0.11334444487897599
FADSPILLTL	10	Unmodified	_FADSPILLTL_					0	0	0			REV__ENST00000278071.6_1_10:106072175-106072370:-|nuORF	REV__ENST00000278071.6_1_10:106072175-106072370:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3133422732353	2	545.313158	1088.61176	2.2452	0.0012243	0.39829	0.00021719	2.6435	0.0014415	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.65574	1	29878	29878		20.454	1.1966	1	12778000	+		4805	12248	2420	2435	5931	5931					0.07100066934322058
FAEIGVIDIL	10	Unmodified	_FAEIGVIDIL_					0	0	0		tr|A0A7D6VRP5|A0A7D6VRP5_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12965PE=3SV=1	tr|A0A7D6VRP5|A0A7D6VRP5_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12965PE=3SV=1	tr|A0A7D6VRP5|A0A7D6VRP5_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3119994997978	2	545.313158	1088.61176	2.2452	0.0012243	0.39829	0.00021719	2.6435	0.0014415	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.6819	1	29711	29711		19.257	1.122	1	12778000			4806	16837	2421	2436	5932	5932					0.07100066934322058
FAELRQERERQ	11	Unmodified	_FAELRQERERQ_					0	0	0			REV__ENSG00000130254|ENST00000252542|SAFB2	REV__ENSG00000130254|ENST00000252542|SAFB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.9238159060478	3	487.923418	1460.74842	1.6149	0.00078795	-0.33943	-0.00016562	1.2755	0.00062233	488.25780463404215	71.32	0.68862	73.144	72.85	73.539	1.824					64	21	4	0	0	0	0.95289	1	29954	29954		6.6235	0.3891	1	14339000	+		4807	9772	2422	2437	5933	5933					0.036479491467616754
FAELTITLCIV	11	Unmodified	_FAELTITLCIV_					0	0	0		ENSG00000185313|ENST00000449082|SCN10A;SCN10A|p.F1193Sfs*12|1|0.06|ENSG00000185313|chr3:38718756-38718757|-/G|frameshift_variant	ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8550292849541	2	611.841225	1221.6679	2.6402	0.0016154	-2.5895	-0.0015844	0.050716	3.103E-05	611.8386905125108	85.437	1.1973	86.569	86.152	87.35	1.1326					120	47	3	0	0	0	0.33951	1	35721	35721		29.082	4.4077	1	107710000			4808	4740	2423	2438	5934	5934					0.06592951779475698
FAENNITQSK	10	Unmodified	_FAENNITQSK_					0	0	0			REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	REV__nc|ENSG00000083544|Q9H7E2-2|TDRD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.7899047732353	2	576.288202	1150.56185	0.14089	8.1191E-05	0.7712	0.00044443	0.91209	0.00052563	576.2888848738817	15.53	0.16202	16.356	16.231	16.393	0.82643					9	5	2	0	0	0	0.63205	1	6458	6458		21.537	4.0943	1	1047400	+		4809	8832	2424	2439	5935	5935					-0.0074066774163839
FAFEEAIGY	9	Unmodified	_FAFEEAIGY_					0	0	0		ENSG00000169299|ENST00000381967|PGM2	ENSG00000169299|ENST00000381967|PGM2	ENSG00000169299|ENST00000381967|PGM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7482787966728	2	523.745108	1045.47566	2.0781	0.0010884	-1.9188	-0.001005	0.15929	8.343E-05	523.7458113111451	66.29	0.33563	67.679	67.507	67.843	1.3887					19	10	3	0	0	0	0.078975	1	27805	27805		56.541	35.67	1	1262200			4810	4081	2425	2440	5936	5936					-0.045256275763449594
FAFEEAIGY	9	Unmodified	_FAFEEAIGY_					0	0	0		ENSG00000169299|ENST00000381967|PGM2	ENSG00000169299|ENST00000381967|PGM2	ENSG00000169299|ENST00000381967|PGM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7458373904228	2	523.745108	1045.47566	1.7374	0.00090995	-1.0626	-0.00055651	0.67483	0.00035344	523.7456089678832	65.881	0.33495	67.79	67.616	67.951	1.9085					20	10	3	0	0	0	0.22519	1	27617	27617		30.225	9.3536	1	1462700			4811	4081	2425	2440	5937	5937					-0.045256275763449594
FAFEVTQDF	9	Unmodified	_FAFEVTQDF_					0	0	0		ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF;ENSG00000103811|ENST00000220166|CTSH	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2578613162041	2	552.25584	1102.49713	1.8307	0.001011	1.1331	0.00062574	2.9637	0.0016367	552.2566692533937	72.006	1.5182	73.347	72.689	74.207	1.3415					89	48	3	0	0	0	0.045797	2	30193	30193;30240		71.134	37.031	1	4075600			4812	1443	2426	2441	5938;5939	5938					-0.05002242547629976
FAFEVTQDF	9	Unmodified	_FAFEVTQDF_					0	0	0		ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF;ENSG00000103811|ENST00000220166|CTSH	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1103.507250964642	1	1103.5044	1102.49713	1.6813	0.0018553	0.95432	0.0010531	2.6356	0.0029085	1103.5053079561444	71.968	0.50182	73.309	73.122	73.624	1.3415					25	15	2	0	0	0	0.083604	2	30275	30223;30275		54.774	27.89	1	980500			4813	1443	2426	2441	5940;5941	5941					-0.05002242547629976
FAFEVTQDF	9	Unmodified	_FAFEVTQDF_					0	0	0		ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF;ENSG00000103811|ENST00000220166|CTSH	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2566406130791	2	552.25584	1102.49713	1.9244	0.0010628	0.19819	0.00010945	2.1226	0.0011722	552.2562590110911	71.562	0.84085	73.386	73.034	73.875	1.824					67	26	3	0	0	0	0.083604	2	30019	30019;30072		54.774	36.639	1	3622200			4814	1443	2426	2441	5942;5943	5942					-0.05002242547629976
FAFEVTQDF	9	Unmodified	_FAFEVTQDF_					0	0	0		ENST00000527715.5_1_15:79214474-79217794:-|nuORF;ENST00000533777.5_1_15:79214474-79223953:-|nuORF;ENST00000534237.5_1_15:79214474-79224366:-|nuORF;ENSG00000103811|ENST00000220166|CTSH	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	ENST00000527715.5_1_15:79214474-79217794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1103.507250964642	1	1103.5044	1102.49713	2.118	0.0023372	-0.41908	-0.00046246	1.6989	0.0018747	1103.5014308793416	71.541	0.28535	73.365	73.253	73.539	1.824					12	8	2	0	0	0	0.1735	1	30050	30050		36.044	10.645	1	1156400			4815	1443	2426	2441	5944	5944					-0.05002242547629976
FAFFDPVMY	9	Unmodified	_FAFFDPVMY_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1136.515673816204	1	1136.51213	1135.50485	3.7878	0.0043049	0.045961	5.2235E-05	3.8338	0.0043571	1136.5123266656742	92.414	0.36037	93.351	93.146	93.506	0.93624					26	10	4	0	0	0	0.033521	3	38920	38875;38920;38963		81.864	58.716	1	3939900			4816	24	2427	2442	5945;5946;5947	5946					-0.05747806551698886
FAFFDPVMY	9	Unmodified	_FAFFDPVMY_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.7634155154228	2	568.759704	1135.50485	4.2194	0.0023998	-1.3222	-0.000752	2.8972	0.0016478	568.7598242869814	92.422	0.22909	93.358	93.244	93.473	0.93623					15	6	3	0	0	0	0.44535	1	38927	38927		18.135	9.5417	1	655610			4817	24	2427	2442	5948	5948					-0.05747806551698886
FAFFDPVMY	9	Unmodified	_FAFFDPVMY_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1136.515551745892	1	1136.51213	1135.50485	3.0873	0.0035088	0.78166	0.00088836	3.869	0.0043972	1136.5107352284867	91.947	0.35263	93.273	93.118	93.47	1.3269					15	10	2	0	0	0	0.046276	1	38738	38738		70.716	48.969	1	3548300			4818	24	2427	2442	5949	5949					-0.05747806551698886
FAFFDPVMY	9	Unmodified	_FAFFDPVMY_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	568.7580444216728	2	568.759704	1135.50485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.892	1	93.219	92.719	93.719	1.3269								0	0	0	0.29162	1	38691	38691		19.439	11.529	1				4819	24	2427	2442	5950	5950					-0.05747806551698886
FAFKQKLAH	9	Unmodified	_FAFKQKLAH_					0	0	0			REV__ENSG00000146410|ENST00000420702|MTFR2	REV__ENSG00000146410|ENST00000420702|MTFR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3166381716728	2	545.313826	1088.6131	2.2452	0.0012243	-0.82798	-0.00045151	1.4172	0.00077284	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.34572	2	30033	29980;30033		23.148	8.5667	1	12778000	+		4820	10301	2428	2443	5951;5952	5952					0.0723374581373264
FAFPDEFVF	9	Unmodified	_FAFPDEFVF_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1;ENST00000585606.5_1_19:14589230-14590349:-|nuORF;ENSG00000137960|ENST00000370759|GIPC2	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1118.522143542767	1	1118.51932	1117.51205	3.5865	0.0040116	3.6664	0.0041009	7.2529	0.0081125	1118.519879546952	95.828	0.15645	96.25	96.158	96.314	0.4212					9	4	3	0	0	0	0.21592	1	40316	40316		42.095	14.466	1	3801800			4821	2182	2429	2444	5953	5953					-0.04200750679615339
FAFPDEFVF	9	Unmodified	_FAFPDEFVF_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1;ENST00000585606.5_1_19:14589230-14590349:-|nuORF;ENSG00000137960|ENST00000370759|GIPC2	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	559.7671386599541	2	559.7633	1117.51205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.624	1	96.026	95.526	96.526	0.40208								0	0	0	0.24667	1	40233	40233		32.117	15.175	1				4822	2182	2429	2444	5954	5954					-0.04200750679615339
FAFPDEFVF	9	Unmodified	_FAFPDEFVF_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1;ENST00000585606.5_1_19:14589230-14590349:-|nuORF;ENSG00000137960|ENST00000370759|GIPC2	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1118.51932	1117.51205	3.2252	0.0036074	10.229	0.011441	13.454	0.015048	1118.5327936648898	95.628	0.12405	96.03	95.961	96.085	0.40208	-0.10996	0.0046786	NaN	42.095	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3719400			4823	2182	2429	2444							-0.04200750679615339
FAFPGEILM	9	Unmodified	_FAFPGEILM_					0	0	0		SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant;SLC1A1|p.D368Efs*7|1|0.05|ENSG00000106688|chr9:4576672-4576673|-/A|frameshift_variant;ENSG00000106688|ENST00000262352|SLC1A1	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1024.519335925579	1	1024.51722	1023.50994	5.0019	0.0051245	-0.66722	-0.00068358	4.3346	0.0044409	1024.5170759892624	88.391	0.57845	89.448	89.144	89.723	1.0562					29	17	2	0	0	0	0.19075	1	37251	37251		34.102	10.954	1	1301200			4824	1581	2430	2445	5955	5955					-0.0008750268906396741
FAFPGEILM	9	Unmodified	_FAFPGEILM_					0	0	0		SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant;SLC1A1|p.D368Efs*7|1|0.05|ENSG00000106688|chr9:4576672-4576673|-/A|frameshift_variant;ENSG00000106688|ENST00000262352|SLC1A1	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7659179568291	2	512.762246	1023.50994	5.0592	0.0025942	0.97058	0.00049768	6.0298	0.0030919	512.7627462484949	88.046	0.6074	89.493	89.156	89.763	1.4467					29	18	2	0	0	0	0.44535	1	37120	37120		18.135	4.6271	1	1492500			4825	1581	2430	2445	5956	5956					-0.0008750268906396741
FAFPGEILM	9	Unmodified	_FAFPGEILM_					0	0	0		SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant;SLC1A1|p.D368Efs*7|1|0.05|ENSG00000106688|chr9:4576672-4576673|-/A|frameshift_variant;ENSG00000106688|ENST00000262352|SLC1A1	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	SLC1A1|p.L290Hfs*8|1|0.09|ENSG00000106688|chr9:4574007-4574008|-/ATTTAAAAAGAACAAGATCA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	512.762246	1023.50994	5.8951	0.0030228	-0.48469	-0.00024853	5.4104	0.0027743	512.7617509867624	88.329	0.57814	89.385	89.08	89.659	1.0562	-0.05416	-0.00080985	NaN	18.135	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1736400			4826	1581	2430	2445							-0.0008750268906396741
FAFPLHVDY	9	Unmodified	_FAFPLHVDY_					0	0	0		nc|ENSG00000088280|Q8TDY4-3|ASAP3;ENSG00000088280|ENST00000336689|ASAP3;nc|ENSG00000088280|Q8TDY4-2|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7781249880791	2	554.776742	1107.53893	1.8937	0.0010506	0.79515	0.00044113	2.6888	0.0014917	554.7773335635871	66.342	0.60728	67.731	67.389	67.996	1.3888					61	19	4	0	0	0	0.00029988	4	27794	27794;27833;27872;27915		137.59	93.178	1	89379000			4827	1097	2431	2446	5957;5958;5959;5960	5957					-0.010536420684275072
FAFPLHVDY	9	Unmodified	_FAFPLHVDY_					0	0	0		nc|ENSG00000088280|Q8TDY4-3|ASAP3;ENSG00000088280|ENST00000336689|ASAP3;nc|ENSG00000088280|Q8TDY4-2|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7778808474541	2	554.776742	1107.53893	1.6772	0.00093046	0.43652	0.00024217	2.1137	0.0011726	554.7771066797873	65.905	0.79873	67.813	67.466	68.265	1.9085					79	25	5	0	0	0	0.022807	4	27649	27600;27649;27689;27737		97.075	61.03	1	91319000			4828	1097	2431	2446	5961;5962;5963;5964	5962					-0.010536420684275072
FAFRIYDM	8	Oxidation (M)	_FAFRIYDM(Oxidation (M))_		FAFRIYDM(1)		FAFRIYDM(56)	0	0	1		ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7555419802666	2	539.754953	1077.49535	1.5184	0.00081958	1.8029	0.00097312	3.3213	0.0017927	539.7564415108898	48.9	0.68079	50.288	49.864	50.544	1.388					32	21	2	0	0	0	0.38824	2	20426	20426;20504		56.177	42.669	1	765310			4829	5269	2432	2447	5965;5966	5965		94			-0.04029574837227301
FAFRIYDM	8	Oxidation (M)	_FAFRIYDM(Oxidation (M))_		FAFRIYDM(1)		FAFRIYDM(52)	0	0	1		ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7578613162041	2	539.754953	1077.49535	2.249	0.0012139	0.93176	0.00050292	3.1808	0.0017168	539.7557266244772	48.246	0.55444	50.223	50.022	50.576	1.9772					21	17	2	0	0	0	0.43377	1	20191	20191		52.268	34.133	1	992550			4830	5269	2432	2447	5967	5967		94			-0.04029574837227301
FAFRIYDM	8	Unmodified	_FAFRIYDM_					0	0	0		ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7595703005791	2	531.757495	1061.50044	2.9191	0.0015523	-0.27781	-0.00014773	2.6413	0.0014045	531.757711047729	62.218	0.38287	63.636	63.396	63.779	1.4177					37	11	4	0	0	0	0.11511	1	26104	26104		123.45	91.145	1	11884000			4831	5269	2432	2448	5968	5968					-0.0278527097461847
FAFRIYDM	8	Unmodified	_FAFRIYDM_					0	0	0		ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	ENSG00000221823|ENST00000234310|PPP3R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.7595092654228	2	531.757495	1061.50044	2.7151	0.0014438	-1.2447	-0.00066185	1.4705	0.00078193	531.7570241836225	61.638	0.3828	63.595	63.368	63.751	1.9571					35	11	4	0	0	0	0.18674	1	25883	25883		81.89	51.665	1	8283300			4832	5269	2432	2448	5969	5969					-0.0278527097461847
FAFSGVLRA	9	Unmodified	_FAFSGVLRA_					0	0	0		RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant;RREB1|p.S954Vfs*10|1|0.06|ENSG00000124782|chr6:7230957-7230958|-/AGTAGCTTTG|frameshift_variant;nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant	RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2726318240166	2	484.271627	966.528701	1.1229	0.0005438	0.47997	0.00023244	1.6029	0.00077624	484.27192131823483	52.393	0.40293	53.789	53.62	54.023	1.3966					30	12	3	0	0	0	0.029061	2	21964	21918;21964		88.954	31.483	1	9108700			4833	2241	2433	2449	5970;5971	5971					0.044097949970023365
FAFSGVLRA	9	Unmodified	_FAFSGVLRA_					0	0	0		RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant;RREB1|p.S954Vfs*10|1|0.06|ENSG00000124782|chr6:7230957-7230958|-/AGTAGCTTTG|frameshift_variant;nc|ENSG00000124782|Q92766-5|RREB1;nc|ENSG00000124782|Q92766-3|RREB1;nc|ENSG00000124782|Q92766|RREB1;ENSG00000124782|ENST00000379938|RREB1	RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant	RREB1|p.K721Rfs*20|1|0.04|ENSG00000124782|chr6:7230259-7230260|-/CGATCTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2724792361259	2	484.271627	966.528701	0.9871	0.00047803	0.5898	0.00028562	1.5769	0.00076365	484.2718968356698	51.842	0.43182	53.815	53.585	54.016	1.9722					31	13	3	0	0	0	0.026836	3	21713	21669;21713;21757		92.491	25.148	1	8911700			4834	2241	2433	2449	5972;5973;5974	5973					0.044097949970023365
FAFVEYEV	8	Unmodified	_FAFVEYEV_					0	0	0		nc|ENSG00000179950|Q9UHX1-4|PUF60;nc|ENSG00000179950|Q9UHX1-6|PUF60;nc|ENSG00000179950|Q9UHX1-3|PUF60;nc|ENSG00000179950|Q9UHX1-5|PUF60;nc|ENSG00000179950|Q9UHX1-2|PUF60;ENSG00000179950|ENST00000526683|PUF60;SCRIB-PUF60|2|fusion;SCRIB-PUF60|1|fusion	nc|ENSG00000179950|Q9UHX1-4|PUF60	nc|ENSG00000179950|Q9UHX1-4|PUF60	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	502.2928649783134	2	502.242201	1002.46985	2.1453	0.0010774	2.2708	0.0011405	4.4161	0.002218	502.2435389912792	67.953	0.2743	69.33	69.153	69.427	1.3778					12	8	2	0	0	0	2.3239	1	28504	28504		17.087	2.5049	1	345500			4835	4533	2434	2450	5975	5975					-0.031287260879935275
FAGDLMATEV	10	Unmodified	_FAGDLMATEV_					0	0	0			REV__tr|A0A553SKY0|A0A553SKY0_NIACISigma-54factorinteractiondomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_19590PE=4SV=1	REV__tr|A0A553SKY0|A0A553SKY0_NIACISigma-54factorinteractiondomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_19590PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.2515136599541	2	527.2497	1052.48485	1.8763	0.00098928	0.66931	0.00035289	2.5456	0.0013422	527.2515889195242	65.889	0.35	65.889	65.708	66.058	0					21	10	3	0	0	0	0.65295	1	27462	27462		13.042	0	1	824150	+		4836	14972	2435	2451	5976	5976					-0.03929602282300948
FAGGGGGH	8	Unmodified	_FAGGGGGH_					0	0	0			REV__SRC|p.A27G|1|0.32|ENSG00000197122|chr20:37384233-37384233|C/G|missense_variant	REV__SRC|p.A27G|1|0.32|ENSG00000197122|chr20:37384233-37384233|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	659.0333129763603	1	659.289599	658.282323	1.4262	0.00094025	-4.4423	-0.0029288	-3.0162	-0.0019885	659.2854657588625	37.072	0.32561	37.376	37.186	37.512	0.30497					16	13	2	0	0	0	2.3239	1	15535	15535		0	0	1	756790	+		4837	14666	2436	2452	5977	5977					-0.06048699782047606
FAGLVQEI	8	Unmodified	_FAGLVQEI_					0	0	0		ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5;ENSG00000150753|ENST00000280326|CCT5	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	876.4851562380791	1	876.482545	875.475269	1.1051	0.00096857	0.77139	0.00067611	1.8765	0.0016447	876.4830620502066	58.569	0.3815	59.987	59.815	60.196	1.4181					28	11	3	0	0	0	0.31058	2	24598	24516;24598		70.865	3.8292	1	13343000			4838	3271	2437	2453	5978;5979	5979					0.032549974944686255
FAGLVQEI	8	Unmodified	_FAGLVQEI_					0	0	0		ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5;ENSG00000150753|ENST00000280326|CCT5	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	876.4830810427666	1	876.482545	875.475269	0.80171	0.00070269	0.15335	0.00013441	0.95506	0.0008371	876.4828635975871	58.039	0.4296	60.008	59.784	60.214	1.969					30	13	3	0	0	0	0.31058	2	24350	24350;24391		70.865	3.8292	1	14819000			4839	3271	2437	2453	5980;5981	5980					0.032549974944686255
FAIDKTIAY	9	Unmodified	_FAIDKTIAY_					0	0	0		nc|ENSG00000123453|Q9UL12-2|SARDH;ENSG00000123453|ENST00000439388|SARDH	nc|ENSG00000123453|Q9UL12-2|SARDH	nc|ENSG00000123453|Q9UL12-2|SARDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2856933474541	2	521.2844	1040.55425	1.7253	0.00089939	-0.37437	-0.00019515	1.351	0.00070424	521.2848924995204	43.038	0.34439	44.378	44.17	44.515	1.3399					23	10	3	0	0	0	0.026411	2	18014	18014;18054		93.166	45.417	1	11274000			4840	2191	2438	2454	5982;5983	5982					0.035592247287468126
FAIDKTIAY	9	Unmodified	_FAIDKTIAY_					0	0	0		nc|ENSG00000123453|Q9UL12-2|SARDH;ENSG00000123453|ENST00000439388|SARDH	nc|ENSG00000123453|Q9UL12-2|SARDH	nc|ENSG00000123453|Q9UL12-2|SARDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2858764529228	2	521.2844	1040.55425	1.7126	0.00089273	-0.16237	-8.4641E-05	1.5502	0.00080809	521.2845446688754	42.416	0.34435	44.337	44.165	44.509	1.9211					16	10	2	0	0	0	0.032536	1	17768	17768		83.429	35.68	1	11993000			4841	2191	2438	2454	5984	5984					0.035592247287468126
FAIPMIHAV	9	Unmodified	_FAIPMIHAV_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7803832888603	2	499.778231	997.541908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.079	1	66.478	65.978	66.978	1.3989								0	0	0	0.048499	1	27293	27293		56.048	19.582	1				4842	1129	2439	2455	5985	5985					0.04303909784732696
FAISILQQL	9	Unmodified	_FAISILQQL_					0	0	0		ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF	ENSG00000156976|ENST00000323963|EIF4A2	ENSG00000156976|ENST00000323963|EIF4A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.8114501833916	2	516.808042	1031.60153	5.524	0.0028549	0.97598	0.00050439	6.5	0.0033593	516.8082046673205	88.072	0.44724	89.129	88.922	89.369	1.0562					32	13	4	0	0	0	0.013238	2	37168	37119;37168		104.8	0	1	8661700			4843	3460	2440	2456	5986;5987	5987					0.08699503999764602
FAISILQQL	9	Unmodified	_FAISILQQL_					0	0	0		ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2;ENST00000485101.5_1_3:186502728-186502902:+|nuORF;ENST00000465032.5_1_3:186501384-186502902:+|nuORF;ENST00000465267.5_1_3:186501384-186502902:+|nuORF	ENSG00000156976|ENST00000323963|EIF4A2	ENSG00000156976|ENST00000323963|EIF4A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8120605349541	2	516.808042	1031.60153	4.8586	0.0025109	2.1249	0.0010982	6.9835	0.0036091	516.8087924846595	87.693	0.47705	89.188	88.951	89.428	1.4953					31	14	3	0	0	0	0.013238	2	36998	36947;36998		104.8	0	1	8934300			4844	3460	2440	2456	5988;5989	5989					0.08699503999764602
FAKKFLRK	8	Unmodified	_FAKKFLRK_					0	0	0			REV__ENSG00000118156|ENST00000391901|ZNF541	REV__ENSG00000118156|ENST00000391901|ZNF541	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	346.8936340212822	3	346.5588	1036.65457	0.088917	3.0815E-05	1.6547	0.00057345	1.7436	0.00060426	346.559397651492	23.433	0.37069	25.084	24.9	25.271	1.6511					20	11	2	0	0	0	2.3239	1	9777	9777		0	0	1	542000	+		4845	9512	2441	2457	5990	5990					0.13770926573079123
FAKKVQLW	8	Unmodified	_FAKKVQLW_					0	0	0			REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.3065368533134	2	510.30547	1018.59639	3.217	0.0016417	0.99717	0.00050886	4.2142	0.0021505	510.30536617370797	74.384	0.44211	76.18	75.929	76.371	1.7962					20	13	2	0	0	0	0.66111	1	31203	31203		34.187	0.084896	1	4223200	+		4846	13808	2442	2458	5991	5991					0.08783244927803935
FAKLAKDY	8	Unmodified	_FAKLAKDY_					0	0	0			REV__tr|A0A553SG02|A0A553SG02_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09805PE=4SV=1	REV__tr|A0A553SG02|A0A553SG02_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09805PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	478.2665588259697	2	478.26601	954.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.23	1	105.28	104.78	105.78	0.056801								0	0	0	1.0178	1	44561	44561		2.3027	1.5091	1		+		4847	14727	2443	2459	5992	5992					0.03838972902849491
FAKTRKKI	8	Unmodified	_FAKTRKKI_					0	0	0		ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3236266970634	2	496.324194	990.633835	2.0849	0.0010348	-2.2842	-0.0011337	-0.19931	-9.8921E-05	496.32299432263886	89.33	0.4109	89.33	89.115	89.526	0					26	12	3	0	0	0	0.89178	1	37355	37355		0.69038	0	1	2005400			4848	5678	2444	2460	5993	5993					0.13814336193399868
FAKTRKKI	8	Unmodified	_FAKTRKKI_					0	0	0		ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3244201540947	2	496.324194	990.633835	3.2512	0.0016137	-2.214	-0.0010989	1.0372	0.0005148	496.3229008288902	89.164	0.38579	89.387	89.197	89.583	0.2236					25	11	3	0	0	0	0.89178	1	37365	37365		0.69038	0	1	2108400			4849	5678	2444	2460	5994	5994					0.13814336193399868
FAKTRKKI	8	Unmodified	_FAKTRKKI_					0	0	0		ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	ENST00000272163.8_1_1:225590912-225591005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3248474001884	2	496.324194	990.633835	5.6792	0.0028187	-3.2809	-0.0016284	2.3983	0.0011903	496.32233765219087	88.425	0.35408	89.482	89.272	89.626	1.0562					16	10	2	0	0	0	0.89178	1	37280	37280		0.69038	0	1	1675800			4850	5678	2444	2460	5995	5995					0.13814336193399868
FAKVCTLPLP	10	Unmodified	_FAKVCTLPLP_					0	0	0		ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	ENSG00000253598|ENST00000518568|SLC10A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3173705935478	2	544.81227	1087.60999	1.2855	0.00070035	-1.351	-0.00073607	-0.065567	-3.5722E-05	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.84024	1	29812	29812		7.9102	0	1	6733700			4851	5387	2445	2461	5996	5996					0.06968734644715369
FAKVFNIKKM	10	Unmodified	_FAKVFNIKKM_					0	0	0			REV__tr|A0A7D6VPT4|A0A7D6VPT4_9CLOTDUF1189domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00190PE=4SV=1	REV__tr|A0A7D6VPT4|A0A7D6VPT4_9CLOTDUF1189domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00190PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2446166872978	3	409.242372	1224.70529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.62	1	81.62	81.12	82.12	0								0	0	0	0.66176	1	33995	33995		0.62683	0	1		+		4852	15363	2446	2462	5997	5997					0.10192087835753227
FAKVFNIKKM	10	Unmodified	_FAKVFNIKKM_					0	0	0			REV__tr|A0A7D6VPT4|A0A7D6VPT4_9CLOTDUF1189domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00190PE=4SV=1	REV__tr|A0A7D6VPT4|A0A7D6VPT4_9CLOTDUF1189domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00190PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2445251345634	3	409.242372	1224.70529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.739	1	81.739	81.239	82.239	0								0	0	0	0.66176	1	34047	34047		0.62683	0.063655	1		+		4853	15363	2446	2462	5998	5998					0.10192087835753227
FAKYWHIIL	9	Unmodified	_FAKYWHIIL_					0	0	0		nc|ENSG00000161671|Q5UCC4-2|EMC10	nc|ENSG00000161671|Q5UCC4-2|EMC10	nc|ENSG00000161671|Q5UCC4-2|EMC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	397.5623962283134	3	397.56221	1189.6648	0.54717	0.00021753	1.0307	0.00040977	1.5779	0.00062731	397.5623752822523	56.959	0.29517	58.927	58.782	59.077	1.9684					18	11	3	0	0	0	0.67936	1	23908	23908		8.1555	1.0538	1	2208700			4854	7904	2447	2463	5999	5999					0.07755489507644597
FALMLKTGV	9	Unmodified	_FALMLKTGV_					0	0	0			REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2881347537041	2	490.285889	978.557224	2.4142	0.0011836	1.6833	0.00082531	4.0975	0.002009	490.2855792941567	51.751	0.27858	52.077	51.85	52.128	0.32554					11	8	2	0	0	0	0.42305	1	21678	21678		19.257	5.3509	1	783060	+		4855	14761	2448	2464	6000	6000					0.0670877658194513
FALMLKTGV	9	Unmodified	_FALMLKTGV_					0	0	0			REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	490.285889	978.557224	1.8043	0.00088461	-2.3057	-0.0011305	-0.50147	-0.00024586	490.28440219572775	52.271	0.56126	52.271	51.947	52.508	0	0.097489	-0.00034178	NaN	19.257	35	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2505200	+		4856	14761	2448	2464							0.0670877658194513
FALMLKTGV	9	Unmodified	_FALMLKTGV_					0	0	0			REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	490.285889	978.557224	2.4142	0.0011836	1.6833	0.00082531	4.0975	0.002009	490.2855792941567	51.751	0.27858	52.077	51.85	52.128	0.32554	-0.097489	0.0035698	NaN	19.257	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	783060	+		4857	14761	2448	2464							0.0670877658194513
FAMEIDPSL	9	Unmodified	_FAMEIDPSL_					0	0	0		ENST00000590633.1_1_19:12848319-12856427:+|nuORF;ENSG00000198356|ENST00000357332|GET3	ENST00000590633.1_1_19:12848319-12856427:+|nuORF	ENST00000590633.1_1_19:12848319-12856427:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1022.486071765423	1	1022.48631	1021.47903	1.5439	0.0015787	-2.4771	-0.0025328	-0.93313	-0.00095411	1022.4836018571226	68.221	0.33878	69.599	69.427	69.766	1.3778					18	10	2	0	0	0	0.042029	2	28608	28608;28659		74.423	23.568	1	2150200			4858	5049	2449	2465	6001;6002	6001					-0.030847007939769355
FAMEIDPSL	9	Unmodified	_FAMEIDPSL_					0	0	0		ENST00000590633.1_1_19:12848319-12856427:+|nuORF;ENSG00000198356|ENST00000357332|GET3	ENST00000590633.1_1_19:12848319-12856427:+|nuORF	ENST00000590633.1_1_19:12848319-12856427:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1022.485644519329	1	1022.48631	1021.47903	1.9829	0.0020275	-3.8243	-0.0039103	-1.8414	-0.0018828	1022.4815803351653	67.674	0.43433	69.544	69.362	69.796	1.87					19	13	2	0	0	0	0.042029	1	28396	28396		74.423	23.568	1	1956100			4859	5049	2449	2465	6003	6003					-0.030847007939769355
FAMPYFIQV	9	Unmodified	_FAMPYFIQV_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2871581912041	2	558.283346	1114.55214	4.7831	0.0026703	0.25721	0.0001436	5.0403	0.0028139	558.2838554303562	89.986	0.44305	91.006	90.8	91.243	1.0199					42	13	4	0	0	0	0.10722	2	37936	37889;37936		46.921	3.9638	1	9990400			4860	2954	2450	2466	6004;6005	6005					-0.0005552728071052115
FAMPYFIQV	9	Unmodified	_FAMPYFIQV_					0	0	0		nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2855102419853	2	558.283346	1114.55214	4.4341	0.0024755	-0.39901	-0.00022276	4.0351	0.0022527	558.2834434738088	89.551	0.44286	90.956	90.766	91.209	1.4044					41	13	4	0	0	0	0.098957	2	37754	37703;37754		49.669	30.23	1	3556400			4861	2954	2450	2466	6006;6007	6007					-0.0005552728071052115
FAMYPPSMI	9	Unmodified	_FAMYPPSMI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7495605349541	2	528.748282	1055.48201	3.1433	0.001662	-1.799	-0.00095121	1.3443	0.00071079	528.7473892680599	72.567	0.89371	73.897	73.612	74.506	1.3297					49	28	2	0	0	0	0.030843	2	30476	30426;30476		86.121	57.948	1	5207200			4862	2053	2451	2467	6008;6009	6009					-0.043511489408047055
FAMYPPSMI	9	Unmodified	_FAMYPPSMI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7494384646416	2	528.748282	1055.48201	2.8545	0.0015093	-0.48732	-0.00025767	2.3672	0.0012516	528.7476369508267	72.065	0.67248	73.888	73.694	74.367	1.824					35	21	2	0	0	0	0.030843	3	30266	30215;30266;30318		86.121	61.447	1	7517800			4863	2053	2451	2467	6010;6011;6012	6011					-0.043511489408047055
FAMYPPSMI	9	Unmodified	_FAMYPPSMI_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;ENST00000536795.1_1_12:4387934-4398180:+|nuORF;ENST00000513956.5_1_6:41904284-42016364:-|nuORF;nc|ENSG00000112576|P30281-2|CCND3;nc|ENSG00000112576|P30281-3|CCND3;ENSG00000112576|ENST00000372991|CCND3	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1056.492602527142	1	1056.48929	1055.48201	3.4957	0.0036931	-2.0429	-0.0021583	1.4528	0.0015348	1056.4873427937887	72.145	0.51762	73.955	73.68	74.198	1.8101					28	16	2	0	0	0	0.069258	1	30232	30232		60.39	35.716	1	2382600			4864	2053	2451	2467	6013	6013					-0.043511489408047055
FANKRPFPI	9	Unmodified	_FANKRPFPI_					0	0	0			REV__tr|A0A553SJD6|A0A553SJD6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16590PE=4SV=1	REV__tr|A0A553SJD6|A0A553SJD6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16590PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3140136599541	2	545.313826	1088.6131	2.2452	0.0012243	-0.82798	-0.00045151	1.4172	0.00077284	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.34572	1	29930	29930		23.148	0	1	12778000	+		4865	14898	2452	2468	6014	6014					0.0723374581373264
FAPAALRTVP	10	Unmodified	_FAPAALRTVP_					0	0	0		ENST00000605571.1_1_4:1715074-1715257:+|nuORF	ENST00000605571.1_1_4:1715074-1715257:+|nuORF	ENST00000605571.1_1_4:1715074-1715257:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2073852419853	3	348.206315	1041.59712	0.87665	0.00030525	0.3206	0.00011164	1.1972	0.00041689	348.20609772626096	32.614	1.3218	32.908	32.59	33.912	0.29431					80	44	3	0	0	0	0.88508	1	13709	13709		3.0723	0	1	7365600			4866	7557	2453	2469	6015	6015					0.0779803957684635
FAPDDNTWF	9	Unmodified	_FAPDDNTWF_					0	0	0			REV__ENSG00000118515|ENST00000367858|SGK1	REV__ENSG00000118515|ENST00000367858|SGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.8047973513603	2	556.737814	1111.46108	2.1344	0.0011883	-2.2088	-0.0012297	-0.074402	-4.1422E-05	556.7368421181869	68.187	0.37301	69.564	69.364	69.737	1.3778					24	11	3	0	0	0	0.11568	1	28577	28577		6.7232	1.4925	1	1227800	+		4867	9522	2454	2470	6016	6016					-0.09019699724490238
FAPFMRRSFRF	11	Unmodified	_FAPFMRRSFRF_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|192|3|anti-sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|192|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.9248535037041	3	487.923924	1460.74994	1.7871	0.00087195	-0.15374	-7.5011E-05	1.6333	0.00079694	487.9235313531964	71.803	0.68737	73.144	72.842	73.53	1.3415					65	21	5	0	0	0	1.0118	1	30236	30236		3.0723	0.22898	1	10081000	+		4868	14300	2455	2471	6017	6017					0.03799911701798919
FAPFMRRSFRF	11	Unmodified	_FAPFMRRSFRF_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|192|3|anti-sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|192|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.9242126345634	3	487.923924	1460.74994	1.6149	0.00078795	-1.3781	-0.00067239	0.23683	0.00011556	488.25780463404215	71.32	0.68862	73.144	72.85	73.539	1.824					64	21	4	0	0	0	1.0156	1	30010	30010		2.8433	0	1	14339000	+		4869	14300	2455	2471	6018	6018					0.03799911701798919
FAPKSGEYF	9	Unmodified	_FAPKSGEYF_					0	0	0		tr|A0A553SGK3|A0A553SGK3_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=kdgTPE=3SV=1	tr|A0A553SGK3|A0A553SGK3_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=kdgTPE=3SV=1	tr|A0A553SGK3|A0A553SGK3_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=kdgTPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.3042480349541	2	523.2531	1044.49165	1.4076	0.00073652	-0.48259	-0.00025251	0.92499	0.00048401	523.2533004360905	69.027	0.82977	70.879	70.558	71.387	1.853					42	26	2	0	0	0	0.054363	1	28906	28906		28.487	0	1	1976300			4870	16111	2456	2472	6019	6019					-0.02881921339417204
FAPLRQRYT	9	Unmodified	_FAPLRQRYT_					0	0	0			REV__nc|ENSG00000181781|Q3SX64-2|CIMAP1D	REV__nc|ENSG00000181781|Q3SX64-2|CIMAP1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3209106326103	2	576.31964	1150.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.429	1	53.404	52.904	53.904	1.9753								0	0	0	0.42693	1	21553	21553		2.0598	0.21551	1		+		4871	11331	2457	2473	6020	6020					0.055439428370846144
FAPMIWLIV	9	Unmodified	_FAPMIWLIV_					0	0	0			REV__ENSG00000183034|ENST00000331427|OTOP2	REV__ENSG00000183034|ENST00000331427|OTOP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3170043826103	2	545.311906	1088.60926	2.2452	0.0012243	2.6928	0.0014684	4.938	0.0026927	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.51832	1	30083	30083		14.582	2.0501	1	12778000	+		4872	11373	2458	2474	6021	6021					0.06849939995686327
FAQEALTVL	9	Unmodified	_FAQEALTVL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5510131716728	1	991.545874	990.538597	4.6239	0.0045849	-1.8791	-0.0018632	2.7448	0.0027216	991.5447634241084	61.191	0.27621	62.611	62.409	62.685	1.4196					12	8	2	0	0	0	0.18809	1	25672	25672		34.402	8.1336	1	1220500			4873	1526	2459	2475	6022	6022					0.042949382116944435
FAQEALTVL	9	Unmodified	_FAQEALTVL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	991.545874	990.538597	3.8314	0.003799	-3.0374	-0.0030117	0.79395	0.00078724	991.5438804298582	60.617	0.24752	62.582	62.482	62.729	1.9653	-0.014329	-0.00040402	NaN	34.402	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718890			4874	1526	2459	2475							0.042949382116944435
FAQVAENK	8	Unmodified	_FAQVAENK_					0	0	0		tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7379333376884	2	453.737617	905.460681	-0.033355	-1.5135E-05	0.89591	0.00040651	0.86256	0.00039137	453.7379320219785	12.11	0.34545	12.804	12.634	12.98	0.69396					25	10	3	0	0	0	0.35495	1	5035	5035		64.236	0	1	3519500			4875	16615	2460	2476	6023	6023					0.004169253463260247
FARFRFRA	8	Unmodified	_FARFRFRA_					0	0	0			REV__nc|ENSG00000187908|Q9UGM3-9|DMBT1	REV__nc|ENSG00000187908|Q9UGM3-9|DMBT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1609985232353	2	535.80396	1069.59337	1.3334	0.00071447	-0.13995	-7.4984E-05	1.1935	0.00063948	535.8041848301193	26.335	0.21929	27.607	27.466	27.685	1.2715					9	6	2	0	0	0	2.3239	1	10981	10981		2.8892	0.58649	1	392220	+		4876	11557	2461	2477	6024	6024					0.061354145936547866
FARKKSKRSS	10	Unmodified	_FARKKSKRSS_					0	0	0			REV__ENSG00000182752|ENST00000328252|PAPPA	REV__ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8574706912041	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.88314	1	32525	32525		3.2813	1.7994	1	11246000	+		4877	11363	2462	2478	6025	6025					0.11018705648461946
FARLNLKNGG	10	Unmodified	_FARLNLKNGG_					0	0	0			REV__tr|A0A7D7A0G6|A0A7D7A0G6_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09895PE=3SV=1	REV__tr|A0A7D7A0G6|A0A7D7A0G6_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3173705935478	2	545.311815	1088.60908	2.2452	0.0012243	2.8605	0.0015599	5.1057	0.0027842	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.85124	1	30127	30127		6.7232	0	1	12778000	+		4878	15808	2463	2479	6026	6026					0.0683165632001419
FARSKKKK	8	Unmodified	_FARSKKKK_					0	0	0			REV__ENST00000447147.5_1_13:30915457-30937356:-|nuORF	REV__ENST00000447147.5_1_13:30915457-30937356:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.8232604861259	2	496.821818	991.629084	1.905	0.00094644	-2.1974	-0.0010917	-0.29238	-0.00014526	496.82073954924135	43.536	0.94146	44.889	44.529	45.47	1.3536					41	30	2	0	0	0	0.88958	1	18489	18489		2.8892	0.58649	1	1815500	+		4879	13110	2464	2480	6027	6027					0.13293452050652377
FARWKIIDSYY	11	Unmodified	_FARWKIIDSYY_					0	0	0		tr|A0A553SI08|A0A553SI08_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13860PE=3SV=1	tr|A0A553SI08|A0A553SI08_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13860PE=3SV=1	tr|A0A553SI08|A0A553SI08_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13860PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.9238159060478	3	487.922355	1460.74524	1.7871	0.00087195	3.0628	0.0014944	4.8498	0.0023663	487.9235313531964	71.803	0.68737	73.144	72.842	73.53	1.3415					65	21	5	0	0	0	0.95289	2	30123	30080;30123		6.6235	2.5068	1	10081000			4880	16177	2465	2481	6028;6029	6029					0.03329306040041047
FASDTILKV	9	Unmodified	_FASDTILKV_					0	0	0		nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2870361208916	2	497.2844	992.554247	2.3034	0.0011455	2.269	0.0011283	4.5724	0.0022738	497.28543820501	44.208	0.22385	45.561	45.439	45.663	1.3536					9	6	2	0	0	0	0.63129	1	18563	18563		10.074	0.72649	1	627730			4881	8009	2466	2482	6030	6030					0.057672247287769096
FASDTILKV	9	Unmodified	_FASDTILKV_					0	0	0		nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	nc|ENSG00000253910|Q9Y5G2-2|PCDHGB2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	497.2844	992.554247	2.0217	0.0010054	2.7183	0.0013517	4.74	0.0023571	497.2848551831773	43.587	0.18062	45.531	45.427	45.607	1.9438	-0.015125	0.00023795	NaN	10.074	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	734530			4882	8009	2466	2482							0.057672247287769096
FASDVQFVL	9	Unmodified	_FASDVQFVL_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-3|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2704345583916	2	513.26875	1024.52295	2.58	0.0013242	4.3321	0.0022235	6.9121	0.0035478	513.2690878078486	72.109	0.37407	73.451	73.31	73.684	1.3415					18	11	2	0	0	0	0.10294	1	30284	30284		48.346	19.859	1	1385900			4883	1219;7840	2467	2483	6031	6031					0.011666516946661432
FASDVQFVL	9	Unmodified	_FASDVQFVL_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-3|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2704955935478	2	513.26875	1024.52295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.791	1	73.615	73.115	74.115	1.824								0	0	0	0.27791	1	30117	30117		20.454	4.6064	1				4884	1219;7840	2467	2483	6032	6032					0.011666516946661432
FASEVSNVL	9	Unmodified	_FASEVSNVL_					0	0	0		nc|ENSG00000136738|Q92783-2|STAM;ENSG00000136738|ENST00000377524|STAM	nc|ENSG00000136738|Q92783-2|STAM	nc|ENSG00000136738|Q92783-2|STAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	965.4969360232353	1	965.493838	964.486562	1.6316	0.0015753	-0.46099	-0.00044508	1.1707	0.0011303	965.4943368562803	47.785	0.21678	49.167	49.111	49.328	1.3825					10	6	2	0	0	0	0.39927	1	20009	20009		20.454	5.6154	1	482350			4885	2734	2468	2484	6033	6033					0.002897747979545784
FASGLIHRV	9	Unmodified	_FASGLIHRV_					0	0	0		ENST00000490672.1_1_1:155141918-155142388:-|nuORF;ENST00000463527.5_1_1:155141918-155144917:-|nuORF;ENST00000471891.5_1_1:155141918-155145146:-|nuORF;ENSG00000163463|ENST00000295682|KRTCAP2;ENST00000497317.5_1_1:155141901-155145703:-|nuORF;nc|ENSG00000163463|Q8N6L1-2|KRTCAP2	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2908813357353	2	500.290351	998.566149	1.4451	0.00072299	-0.45339	-0.00022683	0.99174	0.00049616	500.2901455247342	24.443	0.36431	25.684	25.547	25.912	1.241					31	11	4	0	0	0	4.34E-05	3	10252	10178;10203;10252		155.03	98.849	1	6304900			4886	3684	2469	2485	6034;6035;6036	6036					0.06680886262597596
FASGLIHRV	9	Unmodified	_FASGLIHRV_					0	0	0		ENST00000490672.1_1_1:155141918-155142388:-|nuORF;ENST00000463527.5_1_1:155141918-155144917:-|nuORF;ENST00000471891.5_1_1:155141918-155145146:-|nuORF;ENSG00000163463|ENST00000295682|KRTCAP2;ENST00000497317.5_1_1:155141901-155145703:-|nuORF;nc|ENSG00000163463|Q8N6L1-2|KRTCAP2	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	334.4791747927666	3	333.86266	998.566149	0.15331	5.1184E-05	2.7108	0.00090502	2.8641	0.00095621	333.8636037426288	24.443	0.78285	25.684	25.485	26.268	1.241					52	25	4	0	0	0	0.093582	1	10213	10213		28.495	17.671	1	28800000			4887	3684	2469	2485	6037	6037					0.06680886262597596
FASGLIHRV	9	Unmodified	_FASGLIHRV_					0	0	0		ENST00000490672.1_1_1:155141918-155142388:-|nuORF;ENST00000463527.5_1_1:155141918-155144917:-|nuORF;ENST00000471891.5_1_1:155141918-155145146:-|nuORF;ENSG00000163463|ENST00000295682|KRTCAP2;ENST00000497317.5_1_1:155141901-155145703:-|nuORF;nc|ENSG00000163463|Q8N6L1-2|KRTCAP2	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2909728884697	2	500.290351	998.566149	0.36076	0.00018048	0.020989	1.0501E-05	0.38175	0.00019098	500.2903007871961	24.052	0.45962	25.736	25.568	26.028	1.6845					36	14	4	0	0	0	2.4291E-05	3	10059	10012;10059;10117		168.66	112.48	1	5300500			4888	3684	2469	2485	6038;6039;6040	6039					0.06680886262597596
FASGLIHRV	9	Unmodified	_FASGLIHRV_					0	0	0		ENST00000490672.1_1_1:155141918-155142388:-|nuORF;ENST00000463527.5_1_1:155141918-155144917:-|nuORF;ENST00000471891.5_1_1:155141918-155145146:-|nuORF;ENSG00000163463|ENST00000295682|KRTCAP2;ENST00000497317.5_1_1:155141901-155145703:-|nuORF;nc|ENSG00000163463|Q8N6L1-2|KRTCAP2	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	ENST00000490672.1_1_1:155141918-155142388:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	334.4797851443291	3	333.86266	998.566149	0.038233	1.2765E-05	1.7747	0.00059251	1.813	0.00060528	333.86322917114967	24.022	1.098	25.707	25.536	26.634	1.6845					68	36	4	0	0	0	0.098734	1	10047	10047		20.581	15.684	1	23656000			4889	3684	2469	2485	6041	6041					0.06680886262597596
FASMSRSCL	9	Unmodified	_FASMSRSCL_					0	0	0		ENST00000411807.1_1_11:5543719-5544284:-|nuORF	ENST00000411807.1_1_11:5543719-5544284:-|nuORF	ENST00000411807.1_1_11:5543719-5544284:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2314636111259	2	501.230787	1000.44702	2.8071	0.001407	-1.581	-0.00079245	1.2261	0.00061457	501.22995793928993	83.001	0.46171	84.213	83.951	84.413	1.2125					62	14	6	0	0	0	0.59203	1	34798	34798		11.64	1.5664	1	7433400			4890	6385	2470	2486	6042	6042					-0.053183917487558574
FASSFKIVL	9	Unmodified	_FASSFKIVL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2992126345634	2	506.29731	1010.58007	2.2138	0.0011208	1.4796	0.00074912	3.6934	0.00187	506.29837633590813	61.448	0.32068	63.405	63.209	63.53	1.9571					13	9	2	0	0	0	0.37357	1	25787	25787		21.747	2.3076	1	653570			4891	4730	2471	2487	6043	6043					0.07520118971035572
FASSFKIVL	9	Unmodified	_FASSFKIVL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	506.29731	1010.58007	3.148	0.0015938	1.3017	0.00065907	4.4498	0.0022529	506.2978209228103	62.025	0.25391	63.442	63.303	63.556	1.4177	0.018511	-0.00010027	NaN	21.747	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1009700			4892	4730	2471	2487							0.07520118971035572
FASTILHLV	9	Unmodified	_FASTILHLV_					0	0	0		ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7967407107353	2	500.794935	999.575317	2.9914	0.0014981	2.6004	0.0013022	5.5918	0.0028003	500.7950389746112	61.671	0.53122	63.088	62.865	63.396	1.4177					31	16	3	0	0	0	0.02596	1	25899	25899		93.883	55.732	1	20954000			4893	2408	2472	2488	6044	6044					0.07551234828281395
FASTILHLV	9	Unmodified	_FASTILHLV_					0	0	0		ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7961303591728	2	500.794935	999.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.152	1	63.117	62.617	63.617	1.9653								0	0	0	0.03046	1	25662	25662		70.716	40.491	1				4894	2408	2472	2488	6045	6045					0.07551234828281395
FASVGYAI	8	Unmodified	_FASVGYAI_					0	0	0			REV__DOK4-PLLP|1|fusion	REV__DOK4-PLLP|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.2195617556572	2	414.218529	826.422505	0.65052	0.00026946	2.2566	0.00093474	2.9071	0.0012042	414.21936235542074	29.895	0.33571	31.177	31.012	31.348	1.2825					23	10	3	0	0	0	0.56817	2	12547	12502;12547		42.968	3.9625	1	11030000	+		4895	8459	2473	2489	6046;6047	6047					0.002350394316636084
FASVGYAI	8	Unmodified	_FASVGYAI_					0	0	0			REV__DOK4-PLLP|1|fusion	REV__DOK4-PLLP|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.2195922732353	2	414.218529	826.422505	0.73955	0.00030633	1.1962	0.00049547	1.9357	0.0008018	414.21882668162823	29.42	0.36544	31.218	31.051	31.416	1.7987					24	11	3	0	0	0	0.47134	2	12307	12307;12359		49.669	2.748	1	7506600	+		4896	8459	2473	2489	6048;6049	6048					0.002350394316636084
FASVGYAI	8	Unmodified	_FASVGYAI_					0	0	0			REV__DOK4-PLLP|1|fusion	REV__DOK4-PLLP|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	414.218529	826.422505	0.65052	0.00026946	2.2566	0.00093474	2.9071	0.0012042	414.21936235542074	29.895	0.33571	31.177	31.012	31.348	1.2825	-0.020672	0.00029905	NaN	49.669	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11030000	+		4897	8459	2473	2489							0.002350394316636084
FASVGYAI	8	Unmodified	_FASVGYAI_					0	0	0			REV__DOK4-PLLP|1|fusion	REV__DOK4-PLLP|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	414.218529	826.422505	0.73955	0.00030633	1.1962	0.00049547	1.9357	0.0008018	414.21882668162823	29.42	0.36544	31.218	31.051	31.416	1.7987	0.020672	-0.00057948	NaN	49.669	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7506600	+		4898	8459	2473	2489							0.002350394316636084
FASVLIRRI	9	Unmodified	_FASVLIRRI_					0	0	0		nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF	nc|ENSG00000135317|Q9Y5W7-3|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	MSMS	GG20161007_CRH_Patient100_W632_01	3	358.8971435427666	3	358.897593	1073.67095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.058	1	38.342	37.842	38.842	1.284								0	0	0	0.046427	1	15556	15556		53.404	24.322	1				4899	2656	2474	2490	6050	6050					0.13706007739187953
FASVLIRRI	9	Unmodified	_FASVLIRRI_					0	0	0		nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF	nc|ENSG00000135317|Q9Y5W7-3|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	358.8966552615166	3	358.897593	1073.67095	0.37128	0.00013325	-1.7224	-0.00061816	-1.3511	-0.00048491	358.89687635150324	36.396	0.26612	38.214	38.065	38.331	1.8176					32	22	2	0	0	0	0.24056	2	15275	15227;15275		28.495	11.382	1	6148100			4900	2656	2474	2490	6051;6052	6052					0.13706007739187953
FASWYDEYESR	11	Unmodified	_FASWYDEYESR_					0	0	0			REV__tr|A0A7D6ZXV8|A0A7D6ZXV8_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23500PE=4SV=1	REV__tr|A0A7D6ZXV8|A0A7D6ZXV8_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23500PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.8739501833916	3	484.87373	1451.59936	0.70368	0.0003412	-0.45248	-0.0002194	0.2512	0.0001218	484.87382718353217	16.021	0.18504	16.021	15.902	16.087	0					13	5	3	0	0	0	1.0224	1	6654	6654		2.4348	0.35082	1	759460	+		4901	15768	2475	2491	6053	6053					-0.1083762126665988
FATFQACW	8	Unmodified	_FATFQACW_					0	0	0			REV__ENSG00000221886|ENST00000408953|FAM200C	REV__ENSG00000221886|ENST00000408953|FAM200C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2159911990166	2	487.215463	972.416374	2.5845	0.0012592	-2.8719	-0.0013992	-0.28736	-0.00014001	487.2138710294565	60.03	0.32969	61.45	61.267	61.597	1.4196					27	10	4	0	0	0	0.87803	1	25159	25159		10.183	0.83596	1	3485400	+		4902	11878	2476	2492	6054	6054					-0.07093802071506161
FATHAAALSVR	11	Unmodified	_FATHAAALSVR_					0	0	0		nc|ENSG00000116560|P23246-2|SFPQ;ENSG00000116560|ENST00000357214|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	nc|ENSG00000116560|P23246-2|SFPQ	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5110351443291	3	381.88049	1142.61964	0.11296	4.3137E-05	-1.413	-0.00053961	-1.3001	-0.00049647	381.88020179070696	18.829	0.18493	20.277	20.18	20.365	1.448					8	5	2	0	0	0	0.14606	1	7841	7841		3.3557	2.4914	1	264870			4903	1973	2477	2493	6055	6055					0.0540363897446241
FATPFLVVR	9	Unmodified	_FATPFLVVR_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3123046755791	2	525.310752	1048.60695	2.568	0.001349	0.045406	2.3852E-05	2.6134	0.0013729	525.3110002032306	60.018	0.81868	61.437	61.115	61.933	1.4196					86	26	5	0	0	0	0.0066739	6	25142	25060;25104;25142;25194;25246;25286		115.69	87.205	1	270290000			4904	2330	2478	2494	6056;6057;6058;6059;6060;6061	6058					0.08459227582216045
FATPFLVVR	9	Unmodified	_FATPFLVVR_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3121826052666	2	525.310752	1048.60695	2.8163	0.0014794	-0.42603	-0.0002238	2.3903	0.0012556	525.310673143441	59.512	0.78715	61.481	61.131	61.918	1.969					85	25	5	0	0	0	0.0066739	5	24906	24860;24906;24945;24984;25036		115.69	88.808	1	295750000			4905	2330	2478	2494	6062;6063;6064;6065;6066	6063					0.08459227582216045
FAVGKKAVLC	10	Unmodified	_FAVGKKAVLC_					0	0	0			REV__ENST00000327906.7_1_3:52453897-52455742:+|nuORF	REV__ENST00000327906.7_1_3:52453897-52455742:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3039428591728	2	518.304613	1034.59467	1.8502	0.00095896	-0.85391	-0.00044258	0.99627	0.00051637	518.3042145266627	66.089	0.311	67.978	67.871	68.182	1.8889					17	9	2	0	0	0	0.13671	1	27744	27744		57.471	9.1255	1	8138700	+		4906	12436	2479	2495	6067	6067					0.07875867847542395
FAVGYGSYDF	10	Unmodified	_FAVGYGSYDF_					0	0	0		ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	ENSG00000122735|ENST00000242317|DNAI1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.8176147341728	2	563.248015	1124.48148	2.0531	0.0011564	-0.38771	-0.00021838	1.6654	0.00093805	563.2479515372141	71.558	0.28429	73.382	73.286	73.57	1.824					12	8	2	0	0	0	0.12397	1	30006	30006		6.7232	0	1	506660			4907	2167	2480	2496	6068	6068					-0.07578529064676331
FAWEPNGSKF	10	Unmodified	_FAWEPNGSKF_					0	0	0		ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B	ENSG00000106263|ENST00000360876|EIF3B	ENSG00000106263|ENST00000360876|EIF3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.7855102419853	2	591.782556	1181.55056	2.3655	0.0013999	-0.85586	-0.00050648	1.5097	0.00089339	591.7831636768896	45.246	0.22768	46.612	46.53	46.758	1.3653					11	6	2	0	0	0	0.12602	1	18970	18970		59.368	30.287	1	622290			4908	1561	2481	2497	6069	6069					-0.0329544504511432
FAWEPNGSKF	10	Unmodified	_FAWEPNGSKF_					0	0	0		ENSG00000106263|ENST00000360876|EIF3B;nc|ENSG00000106263|P55884-2|EIF3B	ENSG00000106263|ENST00000360876|EIF3B	ENSG00000106263|ENST00000360876|EIF3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.7843505740166	2	591.782556	1181.55056	2.0346	0.001204	-0.44323	-0.00026229	1.5913	0.00094173	591.7821332979171	44.709	0.28564	46.669	46.513	46.799	1.9596					12	8	2	0	0	0	0.39773	1	18753	18753		33.445	10.709	1	698810			4909	1561	2481	2497	6070	6070					-0.0329544504511432
FAWPKILKI	9	Unmodified	_FAWPKILKI_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3533813357353	2	558.35242	1114.69029	2.0083	0.0011213	0.55589	0.00031038	2.5641	0.0014317	558.3521951020131	66.407	1.9051	67.796	66.591	68.496	1.3888					123	61	4	0	0	0	0.014947	7	27925	27657;27721;27773;27822;27873;27925;27983		115.69	77.718	1	13298000			4910	1101	2482	2498	6071;6072;6073;6074;6075;6076;6077	6076					0.1375296403007269
FAWPKILKI	9	Unmodified	_FAWPKILKI_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	372.5714599490166	3	372.570706	1114.69029	1.1077	0.00041269	0.55795	0.00020788	1.6656	0.00062057	372.5709252180153	66.469	3.6872	67.858	66.183	69.87	1.3888					336	119	5	0	0	0	0.046715	8	27807	27666;27717;27769;27807;27846;27885;27924;27963		70.332	55.657	1	55718000			4911	1101	2482	2498	6078;6079;6080;6081;6082;6083;6084;6085	6081					0.1375296403007269
FAWPKILKI	9	Unmodified	_FAWPKILKI_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3528320193291	2	558.35242	1114.69029	1.7116	0.00095568	0.5002	0.00027929	2.2118	0.001235	558.3522162309611	65.967	1.5463	67.875	66.751	68.297	1.9085					102	49	4	0	0	0	0.014947	8	27730	27424;27474;27523;27575;27627;27676;27730;27788		115.69	77.718	1	10932000			4912	1101	2482	2498	6086;6087;6088;6089;6090;6091;6092;6093	6092					0.1375296403007269
FAWPKILKI	9	Unmodified	_FAWPKILKI_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	372.5715515017509	3	372.570706	1114.69029	1.4375	0.00053557	-0.20801	-7.7498E-05	1.2295	0.00045807	372.570633659532	65.998	3.4053	67.906	66.213	69.619	1.9085					327	109	5	0	0	0	0.043696	7	27688	27482;27548;27599;27650;27688;27727;27766		72.968	53.606	1	52964000			4913	1101	2482	2498	6094;6095;6096;6097;6098;6099;6100	6098					0.1375296403007269
FAWPKILKI	9	Unmodified	_FAWPKILKI_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	557.7653686404228	2	558.35242	1114.69029	1.5714	0.00087741	0.031072	1.7349E-05	1.6025	0.00089476	558.3521049673064	66.436	0.15868	68.325	68.245	68.404	1.8889					6	4	2	0	0	0	0.10591	1	27846	27846		18.135	6.4947	1	224700			4914	1101	2482	2498	6101	6101					0.1375296403007269
FAYDGKDYL	9	Unmodified	_FAYDGKDYL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2568237185478	2	546.25584	1090.49713	2.156	0.0011777	-0.34575	-0.00018887	1.8103	0.00098888	546.2554960122694	40.775	0.40733	42.101	41.866	42.273	1.3254					32	12	3	0	0	0	0.081597	2	17084	17084;17135		55.503	27.016	1	2495500			4915	5151	2483	2499	6102;6103	6102					-0.04450242547613925
FAYDGKDYL	9	Unmodified	_FAYDGKDYL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2557861208916	2	546.25584	1090.49713	2.057	0.0011237	-1.0441	-0.00057032	1.013	0.00055334	546.25518637034	40.391	0.37096	42.254	42.051	42.422	1.8624					25	11	3	0	0	0	0.1052	2	16911	16911;16963		47.594	24.446	1	2948500			4916	5151	2483	2499	6104;6105	6104					-0.04450242547613925
FAYDGKDYLTL	11	Unmodified	_FAYDGKDYLTL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	653.3218261599541	2	653.321711	1304.62887	0.1959	0.00012799	0.16863	0.00011017	0.36453	0.00023816	653.3216724821128	57.475	0.38207	58.89	58.637	59.019	1.4145					56	17	5	0	0	0	0.0013037	3	24118	24031;24072;24118		162.31	110.68	1	68589000			4917	5151	2484	2500	6106;6107;6108	6108					-0.011260572505079836
FAYDGKDYLTL	11	Unmodified	_FAYDGKDYLTL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	653.3217651247978	2	653.321711	1304.62887	0.73697	0.00048148	-0.15553	-0.00010161	0.58144	0.00037987	653.3215308965541	56.892	0.43068	58.86	58.603	59.034	1.9684					45	14	4	0	0	0	0.0021907	3	23866	23817;23866;23916		150.62	88.629	1	73255000			4918	5151	2484	2500	6109;6110;6111	6110					-0.011260572505079836
FAYEGPMYL	9	Unmodified	_FAYEGPMYL_					0	0	0		RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant;ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1090.493334949017	1	1090.4914	1089.48412	1.8281	0.0019936	0.45921	0.00050076	2.2873	0.0024943	1090.4920148725105	68.201	0.40215	69.579	69.364	69.766	1.3778					36	12	4	0	0	0	0.0082953	3	28627	28584;28627;28672		109.63	75.442	1	5487300			4919	3126	2485	2501	6112;6113;6114	6113					-0.057043969313554044
FAYEGPMYL	9	Unmodified	_FAYEGPMYL_					0	0	0		RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant;ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7510864138603	2	545.749336	1089.48412	2.0169	0.0011007	1.2794	0.00069826	3.2964	0.001799	545.7501139808701	68.235	0.40137	69.613	69.394	69.796	1.3778					40	12	4	0	0	0	0.1735	2	28647	28595;28647		36.044	16.605	1	4816600			4920	3126	2485	2501	6115;6116	6116					-0.057043969313554044
FAYEGPMYL	9	Unmodified	_FAYEGPMYL_					0	0	0		RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant;ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7507202029228	2	545.749336	1089.48412	1.7893	0.00097649	0.12873	7.0255E-05	1.918	0.0010467	545.7496250179851	67.642	0.43694	69.512	69.299	69.736	1.87					50	13	5	0	0	0	0.087207	2	28393	28348;28393		53.576	27.234	1	4855200			4921	3126	2485	2501	6117;6118	6118					-0.057043969313554044
FAYEGPMYL	9	Unmodified	_FAYEGPMYL_					0	0	0		RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant;ENSG00000145860|ENST00000424310|RNF145;nc|ENSG00000145860|Q96MT1-4|RNF145;nc|ENSG00000145860|Q96MT1-3|RNF145;nc|ENSG00000145860|Q96MT1-2|RNF145;nc|ENSG00000145860|Q96MT1-5|RNF145	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	RNF145|p.H596Pfs*7|1|0.02|ENSG00000145860|chr5:159158875-159158876|-/TCAACAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1090.495654284954	1	1090.4914	1089.48412	1.9737	0.0021524	-0.31766	-0.0003464	1.6561	0.0018059	1090.4908899969555	67.663	0.40524	69.533	69.331	69.736	1.87					31	12	3	0	0	0	0.01705	2	28406	28355;28406		101.72	63.571	1	5467300			4922	3126	2485	2501	6119;6120	6120					-0.057043969313554044
FAYPAIRYL	9	Unmodified	_FAYPAIRYL_					0	0	0		ENST00000496863.5_1_1:155679570-155695280:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3;ENSG00000132676|ENST00000368336|DAP3	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3096801638603	2	557.30821	1112.60187	3.0078	0.0016763	-0.3726	-0.00020765	2.6352	0.0014686	557.3083036311024	60.58	1.2611	62	61.053	62.314	1.4196					115	40	4	0	0	0	0.042029	4	25431	25327;25380;25431;25485		74.423	49.023	1	8677200			4923	2545	2486	2502	6121;6122;6123;6124	6123					0.050069237196112226
FAYPAIRYL	9	Unmodified	_FAYPAIRYL_					0	0	0		ENST00000496863.5_1_1:155679570-155695280:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3;ENSG00000132676|ENST00000368336|DAP3	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3104125857353	2	557.30821	1112.60187	3.0069	0.0016758	0.50919	0.00028377	3.5161	0.0019595	557.3085262196288	60.05	1.0716	62.016	61.253	62.325	1.9664					96	34	4	0	0	0	0.022807	4	25232	25143;25185;25232;25273		97.075	64.769	1	9588700			4924	2545	2486	2502	6125;6126;6127;6128	6127					0.050069237196112226
FAYPAIRYLL	10	Unmodified	_FAYPAIRYLL_					0	0	0		ENST00000496863.5_1_1:155679570-155695280:+|nuORF;ENST00000471523.1_1_1:155679570-155695881:+|nuORF;ENST00000462002.5_1_1:155679570-155696073:+|nuORF;nc|ENSG00000132676|P51398-2|DAP3;nc|ENSG00000132676|P51398-3|DAP3;ENSG00000132676|ENST00000368336|DAP3	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	ENST00000496863.5_1_1:155679570-155695280:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	614.2966186404228	2	613.850242	1225.68593	2.7128	0.0016652	-1.7523	-0.0010756	0.96051	0.00058961	613.8507291078339	74.852	0.37253	76.634	76.481	76.854	1.7817					15	11	2	0	0	0	0.12384	1	31424	31424		24.021	16.11	1	595680			4925	2545	2487	2503	6129	6129					0.08211454816523656
FAYTARISV	9	Unmodified	_FAYTARISV_					0	0	0		nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-3|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;ENSG00000122550|ENST00000339077|KLHL7	nc|ENSG00000122550|Q8IXQ5-4|KLHL7	nc|ENSG00000122550|Q8IXQ5-4|KLHL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2864257693291	2	514.282192	1026.54983	2.5882	0.001331	1.0336	0.00053156	3.6217	0.0018626	514.2830423130432	40.241	0.24406	41.552	41.421	41.665	1.3102					11	7	2	0	0	0	0.14534	1	16878	16878		41.956	13.469	1	1300000			4926	2160	2488	2504	6130	6130					0.037617603058379245
FAYTARISV	9	Unmodified	_FAYTARISV_					0	0	0		nc|ENSG00000122550|Q8IXQ5-4|KLHL7;nc|ENSG00000122550|Q8IXQ5-3|KLHL7;nc|ENSG00000122550|Q8IXQ5-5|KLHL7;nc|ENSG00000122550|Q8IXQ5-2|KLHL7;ENSG00000122550|ENST00000339077|KLHL7	nc|ENSG00000122550|Q8IXQ5-4|KLHL7	nc|ENSG00000122550|Q8IXQ5-4|KLHL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2831298708916	2	514.282192	1026.54983	2.1347	0.0010979	-1.2199	-0.00062735	0.91488	0.0004705	514.2817750773764	39.883	0.27929	41.745	41.615	41.894	1.8624					19	8	3	0	0	0	0.20145	1	16712	16712		41.956	13.469	1	1556400			4927	2160	2488	2504	6131	6131					0.037617603058379245
FAYTASHNDS	10	Unmodified	_FAYTASHNDS_					0	0	0			REV__CON__Q3SZV7	REV__CON__Q3SZV7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.7364990115166	2	556.735803	1111.45705	2.1345	0.0011883	1.4039	0.00078162	3.5384	0.00197	556.7368421181869	68.187	0.37301	69.564	69.364	69.737	1.3778					24	11	3	0	0	0	0.80011	1	28634	28634		12.241	1.1262	1	1227800	+	+	4928	8390	2489	2505	6132	6132					-0.0942178921818595
FAYTVKYVL	9	Unmodified	_FAYTVKYVL_					0	0	0		ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;ENSG00000160087|ENST00000349431|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3122436404228	2	552.310418	1102.60628	1.5406	0.0008509	1.0271	0.00056726	2.5677	0.0014182	552.3107345427185	54.544	0.28838	55.948	55.771	56.06	1.4048					14	8	2	0	0	0	0.35391	1	22837	22837		22.736	8.8302	1	1318700			4929	3542	2490	2506	6133	6133					0.059083881425067375
FAYTVKYVL	9	Unmodified	_FAYTVKYVL_					0	0	0		ENST00000464036.5_1_1:1190585-1197670:-|nuORF;nc|ENSG00000160087|Q8N2K1-2|UBE2J2;ENSG00000160087|ENST00000349431|UBE2J2;nc|ENSG00000160087|Q8N2K1-3|UBE2J2	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	ENST00000464036.5_1_1:1190585-1197670:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.310418	1102.60628	1.5124	0.00083529	-0.1666	-9.2014E-05	1.3458	0.00074327	552.3102163098968	54.059	0.34705	56.028	55.845	56.192	1.9684	0.039669	-0.0009273	NaN	22.736	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	887010			4930	3542	2490	2506							0.059083881425067375
FCCRRFRRF	9	Unmodified	_FCCRRFRRF_					0	0	0			REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882018923759	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.35	1	110.4	109.9	110.9	0.047043								0	0	0	0.42693	1	47610	47610		0	0	1		+		4931	12936	2491	2507	6134	6134					0.0053857379286910145
FCCRRFRRF	9	Unmodified	_FCCRRFRRF_					0	0	0			REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881103396416	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.44	1	110.49	109.99	110.99	0.047043								0	0	0	0.42693	1	47645	47645		0	0	1		+		4932	12936	2491	2507	6135	6135					0.0053857379286910145
FCCRRFRRF	9	Unmodified	_FCCRRFRRF_					0	0	0			REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8880493044853	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.65	1	110.69	110.19	111.19	0.047043								0	0	0	0.42693	1	47722	47722		0	0	1		+		4933	12936	2491	2507	6136	6136					0.0053857379286910145
FCCRRFRRF	9	Unmodified	_FCCRRFRRF_					0	0	0			REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882018923759	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.26	110.76	111.76	0.047043								0	0	0	0.42693	1	47957	47957		0	0	1		+		4934	12936	2491	2507	6137	6137					0.0053857379286910145
FCCRRFRRF	9	Unmodified	_FCCRRFRRF_					0	0	0			REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	REV__ENST00000414946.1_2_2:152145569-152146249:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881103396416	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.31	1	111.36	110.86	111.86	0.047043								0	0	0	0.42693	1	47998	47998		0	0	1		+		4935	12936	2491	2507	6138	6138					0.0053857379286910145
FCEFYDEQ	8	Unmodified	_FCEFYDEQ_					0	0	0			REV__ENST00000595671.5_1_19:57286058-57293785:-|nuORF	REV__ENST00000595671.5_1_19:57286058-57293785:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1080.909838855267	1	1080.39789	1079.39061	2.3213	0.0025079	1.609	0.0017383	3.9302	0.0042462	1080.4017986091085	38.139	0.068333	38.448	38.389	38.457	0.30857					6	4	2	0	0	0	2.3239	1	16045	16045		8.5933	0	1	1115100	+		4936	12001	2492	2508	6139	6139					-0.14590741104461813
FCFASLFHL	9	Unmodified	_FCFASLFHL_					0	0	0		ENSG00000237110|ENST00000434551|TAAR9	ENSG00000237110|ENST00000434551|TAAR9	ENSG00000237110|ENST00000434551|TAAR9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.7713500857353	2	542.767863	1083.52117	2.1316	0.001157	3.2935	0.0017876	5.4251	0.0029446	542.7693318092133	83.98	0.4305	83.98	83.721	84.151	0					26	13	2	0	0	0	0.77526	1	34929	34929		4.3292	1.7518	1	10518000			4937	5324	2493	2509	6140	6140					-0.01724680594952588
FCFCDWFSPDE	11	Unmodified	_FCFCDWFSPDE_					0	0	0			REV__ENSG00000149313|ENST00000278618|AASDHPPT	REV__ENSG00000149313|ENST00000278618|AASDHPPT	MSMS	GG20161007_CRH_Patient100_W632_01	3	698.2549316287041	2	698.254656	1394.49476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2605	1	9.9111	9.4111	10.411	0.65058								0	0	0	0.63775	1	3847	3847		0	0	1		+		4938	10369	2494	2510	6141	6141					-0.18670782339245307
FCGSDSAY	8	Unmodified	_FCGSDSAY_					0	0	0			REV__nc|ENSG00000115266|O95996-2|APC2	REV__nc|ENSG00000115266|O95996-2|APC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	425.1598998904228	2	425.157811	848.301069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.82	1	102	101.5	102.5	0.17032								0	0	0	1.0178	1	42842	42842		0.79363	0	1		+		4939	9432	2495	2511	6142	6142					-0.1291495099317217
FCIYSLFFAW	10	Unmodified	_FCIYSLFFAW_					0	0	0		nc|ENSG00000070269|Q9NX78-3|TMEM260;TMEM260|p.V584Nfs*14|1|0.31|ENSG00000070269|chr14:56634923-56634936|TGTGGCCAATGAAG/-|frameshift_variant;ENSG00000070269|ENST00000261556|TMEM260;ENST00000553335.5_1_14:57076000-57086109:+|nuORF	nc|ENSG00000070269|Q9NX78-3|TMEM260	nc|ENSG00000070269|Q9NX78-3|TMEM260	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.8143188357353	2	648.809728	1295.6049	2.7056	0.0017554	3.0419	0.0019736	5.7475	0.003729	648.8120030582284	80.914	1.4712	82.147	81.742	83.213	1.2332					91	47	3	0	0	0	0.81324	1	34133	34133		10.824	1.4408	1	3440800			4940	849	2496	2512	6143	6143					-0.03107569217877426
FCMFDMECHK	10	Unmodified	_FCMFDMECHK_					0	0	0		ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8317138552666	3	430.830657	1289.47014	-0.19151	-8.2509E-05	1.4328	0.00061729	1.2413	0.00053478	430.831489351347	11.988	0.36985	11.988	11.757	12.127	0					24	11	3	0	0	0	0.80072	1	4962	4962		12.175	0.54338	1	3795500			4941	3580	2497	2513	6144	6144					-0.16301457017971188
FCMFDMECHK	10	Unmodified	_FCMFDMECHK_					0	0	0		ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	ENSG00000160868|ENST00000651514|CYP3A4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	430.830657	1289.47014	0.51964	0.00022388	1.8845	0.00081188	2.4041	0.0010358	430.8314829001139	11.958	0.346	12.048	11.867	12.213	0.089381	0.03001	0.00038411	NaN	12.175	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678150			4942	3580	2497	2513							-0.16301457017971188
FCQWWRKGRWD	11	Unmodified	_FCQWWRKGRWD_					0	0	0			REV__ENST00000554594.1_1_14:73140759-73181199:-|nuORF	REV__ENST00000554594.1_1_14:73140759-73181199:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	783.8658935427666	2	784.372412	1566.73027	1.7644	0.001384	4.3922	0.0034451	6.1566	0.0048291	784.3763154217338	83.04	0.25003	84.678	84.605	84.855	1.6379					10	7	2	0	0	0	0.14606	1	34843	34843		2.4985	1.169	1	2080000	+		4943	13855	2498	2514	6145	6145					-0.030424643089872916
FDAWDAFAHL	10	Unmodified	_FDAWDAFAHL_					0	0	0		nc|ENSG00000284762|O95263-2|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B;nc|ENSG00000284762|O95263-5|PDE8B;nc|ENSG00000284762|O95263-3|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7565185427666	2	596.774731	1191.53491	2.6589	0.0015868	-0.69293	-0.00041352	1.966	0.0011732	596.7741457842287	80.516	0.36771	81.767	81.544	81.912	1.2512					35	11	5	0	0	0	0.78468	1	33770	33770		13.906	3.0821	1	4425100			4944	1811	2499	2515	6146	6146					-0.053197315621673624
FDDEAPEELTF	11	Unmodified	_FDDEAPEELTF_					0	0	0		nc|ENSG00000225921|Q9UMY1-2|NOL7;ENSG00000225921|ENST00000451315|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.7836791872978	2	656.782615	1311.55068	4.8862	0.0032092	0.82614	0.00054259	5.7123	0.0037518	656.7832814671546	89.662	0.40253	90.682	90.429	90.831	1.0199					36	12	4	0	0	0	0.54522	1	37748	37748		22.736	1.1993	1	4738900			4945	5293	2500	2516	6147	6147					-0.09263534626438741
FDDEAPEELTF	11	Unmodified	_FDDEAPEELTF_					0	0	0		nc|ENSG00000225921|Q9UMY1-2|NOL7;ENSG00000225921|ENST00000451315|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.7881347537041	2	656.782615	1311.55068	4.6191	0.0030338	0.93964	0.00061714	5.5588	0.0036509	656.7835266250464	89.225	0.40316	90.629	90.425	90.828	1.4045					34	12	4	0	0	0	0.37492	2	37563	37563;37611		27.629	4.8925	1	4799700			4946	5293	2500	2516	6148;6149	6148					-0.09263534626438741
FDDENFILK	9	Unmodified	_FDDENFILK_					0	0	0		ENST00000414193.2_1_X:100698832-100699039:-|nuORF;ENST00000567565.3_1_15:76039287-76039500:+|nuORF;ENST00000420099.1_1_13:91924337-91924628:-|nuORF;ENST00000577627.1_1_18:5002795-5003119:-|nuORF;ENST00000441944.2_1_9:7597894-7598236:+|nuORF;ENST00000470213.5_1_1:40214588-40218763:+|nuORF;ENST00000454070.2_1_1:101736433-101736811:-|nuORF;ENST00000452411.1_1_7:98083525-98083918:-|nuORF;ENST00000585753.1_1_19:30412142-30412556:+|nuORF;ENST00000482751.5_1_1:40208803-40219024:+|nuORF;nc|ENSG00000084072|Q9UNP9-2|PPIE;ENSG00000084072|ENST00000324379|PPIE;nc|ENSG00000084072|Q9UNP9-3|PPIE;ZNF7-PPIE|3|fusion;ZNF7-PPIE|1|fusion;ZNF7-PPIE|2|fusion	ENST00000414193.2_1_X:100698832-100699039:-|nuORF	ENST00000414193.2_1_X:100698832-100699039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.7832519412041	2	570.782222	1139.54989	1.7858	0.0010193	-0.26325	-0.00015026	1.5226	0.00086906	570.7821540244023	48.66	0.3159	48.66	48.462	48.778	0					18	9	3	0	0	0	0.087723	1	20296	20296		53.404	27.136	1	1264300			4947	1045	2501	2517	6150	6150					-0.014302844848316454
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206848025322	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.523	1	54.523	54.023	55.023	0								0	0	0	1.0178	1	22722	22722		0	0	1				4948	1957	2502	2518	6151	6151					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.619	1	54.619	54.119	55.119	0								0	0	0	1.0178	1	22761	22761		0	0	1				4949	1957	2502	2518	6152	6152					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1210510134697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.739	1	54.739	54.239	55.239	0								0	0	0	1.0178	1	22809	22809		0	0	1				4950	1957	2502	2518	6153	6153					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1204711794853	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.974	1	54.974	54.474	55.474	0								0	0	0	1.0178	1	22904	22904		0	0	1				4951	1957	2502	2518	6154	6154					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209899783134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.904	1	55.904	55.404	56.404	0								0	0	0	1.0178	1	23292	23292		0	0	1				4952	1957	2502	2518	6155	6155					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1213256716728	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.749	1	56.749	56.249	57.249	0								0	0	0	1.0178	1	23670	23670		0	0	1				4953	1957	2502	2518	6156	6156					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1217224001884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.126	1	57.126	56.626	57.626	0								0	0	0	1.0178	1	23837	23837		0	0	1				4954	1957	2502	2518	6157	6157					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1190368533134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.253	1	57.253	56.753	57.753	0								0	0	0	1.0178	1	23892	23892		0	0	1				4955	1957	2502	2518	6158	6158					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1197692751884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.358	1	57.358	56.858	57.858	0								0	0	0	1.0178	1	23936	23936		0	0	1				4956	1957	2502	2518	6159	6159					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1210815310478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.033	1	58.033	57.533	58.533	0								0	0	0	1.0178	1	24212	24212		0	0	1				4957	1957	2502	2518	6160	6160					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.227	1	58.227	57.727	58.727	0								0	0	0	1.0178	1	24291	24291		0	0	1				4958	1957	2502	2518	6161	6161					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.318	1	58.318	57.818	58.818	0								0	0	0	1.0178	1	24328	24328		0	0	1				4959	1957	2502	2518	6162	6162					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1211730837822	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.467	1	58.467	57.967	58.967	0								0	0	0	1.0178	1	24388	24388		0	0	1				4960	1957	2502	2518	6163	6163					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209289431572	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.571	1	64.571	64.071	65.071	0								0	0	0	1.0178	1	26916	26916		0	0	1				4961	1957	2502	2518	6164	6164					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207153201103	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.826	1	64.826	64.326	65.326	0								0	0	0	1.0178	1	27019	27019		0	0	1				4962	1957	2502	2518	6165	6165					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206542849541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.032	1	65.032	64.532	65.532	0								0	0	0	1.0178	1	27103	27103		0	0	1				4963	1957	2502	2518	6166	6166					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1205016970634	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.269	1	65.269	64.769	65.769	0								0	0	0	1.0178	1	27202	27202		0	0	1				4964	1957	2502	2518	6167	6167					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207458376884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.524	1	65.524	65.024	66.024	0								0	0	0	1.0178	1	27306	27306		0	0	1				4965	1957	2502	2518	6168	6168					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207763552666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.974	1	65.974	65.474	66.474	0								0	0	0	1.0178	1	27489	27489		0	0	1				4966	1957	2502	2518	6169	6169					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207763552666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.133	1	66.133	65.633	66.633	0								0	0	0	1.0178	1	27552	27552		0	0	1				4967	1957	2502	2518	6170	6170					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.242	1	66.242	65.742	66.742	0								0	0	0	1.0178	1	27596	27596		0	0	1				4968	1957	2502	2518	6171	6171					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1210204958916	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.341	1	66.341	65.841	66.841	0								0	0	0	1.0178	1	27636	27636		0	0	1				4969	1957	2502	2518	6172	6172					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.573	1	66.573	66.073	67.073	0								0	0	0	1.0178	1	27729	27729		0	0	1				4970	1957	2502	2518	6173	6173					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1196472048759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.195	1	67.195	66.695	67.695	0								0	0	0	1.0178	1	27986	27986		0	0	1				4971	1957	2502	2518	6174	6174					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1205932497978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.515	1	67.515	67.015	68.015	0								0	0	0	1.0178	1	28122	28122		0	0	1				4972	1957	2502	2518	6175	6175					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1203491091728	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.645	1	67.645	67.145	68.145	0								0	0	0	1.0178	1	28175	28175		0	0	1				4973	1957	2502	2518	6176	6176					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1208984255791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.94	1	67.94	67.44	68.44	0								0	0	0	1.0178	1	28296	28296		0	0	1				4974	1957	2502	2518	6177	6177					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1204711794853	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.072	1	68.072	67.572	68.572	0								0	0	0	1.0178	1	28350	28350		0	0	1				4975	1957	2502	2518	6178	6178					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1203796267509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.281	1	71.281	70.781	71.781	0								0	0	0	1.0178	1	29686	29686		0	0	1				4976	1957	2502	2518	6179	6179					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1205016970634	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.503	1	71.503	71.003	72.003	0								0	0	0	1.0178	1	29778	29778		0	0	1				4977	1957	2502	2518	6180	6180					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1202575564384	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.596	1	71.596	71.096	72.096	0								0	0	0	1.0178	1	29816	29816		0	0	1				4978	1957	2502	2518	6181	6181					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1210815310478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.231	1	72.231	71.731	72.731	0								0	0	0	1.0178	1	30077	30077		0	0	1				4979	1957	2502	2518	6182	6182					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209289431572	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.695	1	72.695	72.195	73.195	0								0	0	0	1.0178	1	30266	30266		0	0	1				4980	1957	2502	2518	6183	6183					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1202880740166	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.146	1	73.146	72.646	73.646	0								0	0	0	1.0178	1	30454	30454		0	0	1				4981	1957	2502	2518	6184	6184					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1205016970634	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.82	1	73.82	73.32	74.32	0								0	0	0	1.0178	1	30740	30740		0	0	1				4982	1957	2502	2518	6185	6185					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1205932497978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.167	1	74.167	73.667	74.667	0								0	0	0	1.0178	1	30883	30883		0	0	1				4983	1957	2502	2518	6186	6186					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1212341189384	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.454	1	74.454	73.954	74.954	0								0	0	0	1.0178	1	30999	30999		0	0	1				4984	1957	2502	2518	6187	6187					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.325	1	75.325	74.825	75.825	0								0	0	0	1.0178	1	31359	31359		0	0	1				4985	1957	2502	2518	6188	6188					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206848025322	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.436	1	75.436	74.936	75.936	0								0	0	0	1.0178	1	31404	31404		0	0	1				4986	1957	2502	2518	6189	6189					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.717	1	75.717	75.217	76.217	0								0	0	0	1.0178	1	31520	31520		0	0	1				4987	1957	2502	2518	6190	6190					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1203796267509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.813	1	75.813	75.313	76.313	0								0	0	0	1.0178	1	31559	31559		0	0	1				4988	1957	2502	2518	6191	6191					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1204101443291	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.94	1	75.94	75.44	76.44	0								0	0	0	1.0178	1	31610	31610		0	0	1				4989	1957	2502	2518	6192	6192					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1199828982353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.313	1	76.313	75.813	76.813	0								0	0	0	1.0178	1	31769	31769		0	0	1				4990	1957	2502	2518	6193	6193					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207763552666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.054	1	77.054	76.554	77.554	0								0	0	0	1.0178	1	32078	32078		0	0	1				4991	1957	2502	2518	6194	6194					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.448	1	77.448	76.948	77.948	0								0	0	0	1.0178	1	32241	32241		0	0	1				4992	1957	2502	2518	6195	6195					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1203796267509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.847	1	77.847	77.347	78.347	0								0	0	0	1.0178	1	32409	32409		0	0	1				4993	1957	2502	2518	6196	6196					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.023	1	78.023	77.523	78.523	0								0	0	0	1.0178	1	32481	32481		0	0	1				4994	1957	2502	2518	6197	6197					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207458376884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.12	1	78.12	77.62	78.62	0								0	0	0	1.0178	1	32521	32521		0	0	1				4995	1957	2502	2518	6198	6198					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1206542849541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.242	1	78.242	77.742	78.742	0								0	0	0	1.0178	1	32572	32572		0	0	1				4996	1957	2502	2518	6199	6199					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1207458376884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.557	1	78.557	78.057	79.057	0								0	0	0	1.0178	1	32702	32702		0	0	1				4997	1957	2502	2518	6200	6200					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1204406619072	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.78	1	78.78	78.28	79.28	0								0	0	0	1.0178	1	32794	32794		0	0	1				4998	1957	2502	2518	6201	6201					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1198608279228	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.945	1	78.945	78.445	79.445	0								0	0	0	1.0178	1	32864	32864		0	0	1				4999	1957	2502	2518	6202	6202					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1204101443291	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.312	1	79.312	78.812	79.812	0								0	0	0	1.0178	1	33023	33023		0	0	1				5000	1957	2502	2518	6203	6203					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1210204958916	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.415	1	79.415	78.915	79.915	0								0	0	0	1.0178	1	33067	33067		0	0	1				5001	1957	2502	2518	6204	6204					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.291	1	40.604	40.104	41.104	0.31263								0	0	0	1.0178	1	16939	16939		0.69038	0	1				5002	1957	2502	2518	6205	6205					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1210815310478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.428	1	40.741	40.241	41.241	0.31263								0	0	0	1.0178	1	16996	16996		0	0	1				5003	1957	2502	2518	6206	6206					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1210510134697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.315	1	41.632	41.132	42.132	0.31683								0	0	0	1.0178	1	17357	17357		0	0	1				5004	1957	2502	2518	6207	6207					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1208679080009	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.573	1	41.89	41.39	42.39	0.31683								0	0	0	1.0178	1	17461	17461		0.69038	0.69038	1				5005	1957	2502	2518	6208	6208					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1206542849541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.686	1	42.002	41.502	42.502	0.31683								0	0	0	1.0178	1	17507	17507		0	0	1				5006	1957	2502	2518	6209	6209					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1210510134697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.843	1	42.163	41.663	42.663	0.32058								0	0	0	1.0178	1	17573	17573		0	0	1				5007	1957	2502	2518	6210	6210					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1201354861259	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.8	1	43.12	42.62	43.62	0.32058								0	0	0	1.0178	1	17976	17976		0	0	1				5008	1957	2502	2518	6211	6211					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1202575564384	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.896	1	43.217	42.717	43.717	0.32111								0	0	0	1.0178	1	18017	18017		0	0	1				5009	1957	2502	2518	6212	6212					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1207763552666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.13	1	43.454	42.954	43.954	0.32389								0	0	0	1.0178	1	18113	18113		0	0	1				5010	1957	2502	2518	6213	6213					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1204711794853	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.517	1	43.84	43.34	44.34	0.32389								0	0	0	1.0178	1	18270	18270		0	0	1				5011	1957	2502	2518	6214	6214					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.642	1	43.966	43.466	44.466	0.32389								0	0	0	1.0178	1	18322	18322		0	0	1				5012	1957	2502	2518	6215	6215					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1208679080009	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.005	1	44.329	43.829	44.829	0.32389								0	0	0	1.0178	1	18473	18473		0	0	1				5013	1957	2502	2518	6216	6216					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1211425662041	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.693	1	45.02	44.52	45.52	0.32674								0	0	0	1.0178	1	18768	18768		0	0	1				5014	1957	2502	2518	6217	6217					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1212036013603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.959	1	45.286	44.786	45.786	0.32674								0	0	0	1.0178	1	18879	18879		0	0	1				5015	1957	2502	2518	6218	6218					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1210204958916	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.512	1	45.841	45.341	46.341	0.32899								0	0	0	1.0178	1	19106	19106		0	0	1				5016	1957	2502	2518	6219	6219					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1208984255791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.756	1	46.085	45.585	46.585	0.32899								0	0	0	1.0178	1	19207	19207		0	0	1				5017	1957	2502	2518	6220	6220					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.012	1	46.341	45.841	46.841	0.32899								0	0	0	1.0178	1	19312	19312		0	0	1				5018	1957	2502	2518	6221	6221					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1208679080009	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.11	1	46.439	45.939	46.939	0.32899								0	0	0	1.0178	1	19351	19351		0	0	1				5019	1957	2502	2518	6222	6222					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1212646365166	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.23	1	46.559	46.059	47.059	0.32899								0	0	0	1.0178	1	19401	19401		0	0	1				5020	1957	2502	2518	6223	6223					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.463	1	46.792	46.292	47.292	0.32899								0	0	0	1.0178	1	19495	19495		0	0	1				5021	1957	2502	2518	6224	6224					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1205016970634	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.57	1	46.9	46.4	47.4	0.33034								0	0	0	1.0178	1	19540	19540		0	0	1				5022	1957	2502	2518	6225	6225					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1207153201103	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.696	1	47.027	46.527	47.527	0.33034								0	0	0	1.0178	1	19592	19592		0	0	1				5023	1957	2502	2518	6226	6226					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1212646365166	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.933	1	47.264	46.764	47.764	0.33034								0	0	0	1.0178	1	19689	19689		0	0	1				5024	1957	2502	2518	6227	6227					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1212036013603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.202	1	84.463	83.963	84.963	0.26083								0	0	0	1.0178	1	35218	35218		0	0	1				5025	1957	2502	2518	6228	6228					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1211425662041	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.813	1	85.074	84.574	85.574	0.26083								0	0	0	1.0178	1	35466	35466		0	0	1				5026	1957	2502	2518	6229	6229					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1235229372978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.244	1	95.368	94.868	95.868	0.12331								0	0	0	1.0178	1	39856	39856		0	0	1				5027	1957	2502	2518	6230	6230					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1207153201103	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.35	1	95.473	94.973	95.973	0.12331								0	0	0	1.0178	1	39899	39899		0	0	1				5028	1957	2502	2518	6231	6231					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1222717165947	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.571	1	95.695	95.195	96.195	0.12331								0	0	0	1.0178	1	39993	39993		0	0	1				5029	1957	2502	2518	6232	6232					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1226074099541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.057	1	96.162	95.662	96.662	0.105								0	0	0	1.0178	1	40202	40202		0	0	1				5030	1957	2502	2518	6233	6233					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1197997927666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6277	1	6.249	5.749	6.749	0.62127								0	0	0	1.0178	1	2323	2323		0	0	1				5031	1957	2502	2518	6234	6234					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206848025322	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.786	1	31.069	30.569	31.569	1.2825								0	0	0	1.0178	1	12498	12498		0	0	1				5032	1957	2502	2518	6235	6235					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1204406619072	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.914	1	31.196	30.696	31.696	1.2825								0	0	0	1.0178	1	12553	12553		0	0	1				5033	1957	2502	2518	6236	6236					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1207153201103	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.03	1	31.313	30.813	31.813	1.2825								0	0	0	1.0178	1	12602	12602		0	0	1				5034	1957	2502	2518	6237	6237					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208373904228	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.162	1	31.444	30.944	31.944	1.2825								0	0	0	1.0178	1	12657	12657		0	0	1				5035	1957	2502	2518	6238	6238					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.275	1	31.557	31.057	32.057	1.2825								0	0	0	1.0178	1	12705	12705		0	0	1				5036	1957	2502	2518	6239	6239					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208373904228	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.401	1	31.683	31.183	32.183	1.2825								0	0	0	1.0178	1	12758	12758		0	0	1				5037	1957	2502	2518	6240	6240					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.54	1	31.822	31.322	32.322	1.2825								0	0	0	1.0178	1	12816	12816		0	0	1				5038	1957	2502	2518	6241	6241					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1201660037041	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.769	1	32.052	31.552	32.552	1.2825								0	0	0	1.0178	1	12913	12913		0	0	1				5039	1957	2502	2518	6242	6242					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1198303103447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.396	1	32.677	32.177	33.177	1.2813								0	0	0	1.0178	1	13171	13171		0	0	1				5040	1957	2502	2518	6243	6243					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1198913455009	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.102	1	33.383	32.883	33.883	1.2813								0	0	0	1.0178	1	13467	13467		0	0	1				5041	1957	2502	2518	6244	6244					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1200744509697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.827	1	38.104	37.604	38.604	1.2762								0	0	0	1.0178	1	15456	15456		0	0	1				5042	1957	2502	2518	6245	6245					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1203796267509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.478	1	38.762	38.262	39.262	1.284								0	0	0	1.0178	1	15734	15734		0	0	1				5043	1957	2502	2518	6246	6246					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1202575564384	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.571	1	38.855	38.355	39.355	1.284								0	0	0	1.0178	1	15774	15774		0	0	1				5044	1957	2502	2518	6247	6247					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1203185915947	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.978	1	39.262	38.762	39.762	1.284								0	0	0	1.0178	1	15939	15939		0	0	1				5045	1957	2502	2518	6248	6248					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1207458376884	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.472	1	48.854	48.354	49.354	1.3825								0	0	0	1.0178	1	19874	19874		0	0	1				5046	1957	2502	2518	6249	6249					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206542849541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.598	1	48.98	48.48	49.48	1.3825								0	0	0	1.0178	1	19925	19925		0	0	1				5047	1957	2502	2518	6250	6250					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206237673759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.753	1	49.135	48.635	49.635	1.3825								0	0	0	1.0178	1	19990	19990		0	0	1				5048	1957	2502	2518	6251	6251					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206542849541	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.255	1	49.643	49.143	50.143	1.388								0	0	0	1.0178	1	20198	20198		0	0	1				5049	1957	2502	2518	6252	6252					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1207153201103	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.414	1	49.802	49.302	50.302	1.388								0	0	0	1.0178	1	20265	20265		0	0	1				5050	1957	2502	2518	6253	6253					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208373904228	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.651	1	50.039	49.539	50.539	1.388								0	0	0	1.0178	1	20366	20366		0	0	1				5051	1957	2502	2518	6254	6254					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1202880740166	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.308	1	50.699	50.199	51.199	1.3911								0	0	0	1.0178	1	20641	20641		0	0	1				5052	1957	2502	2518	6255	6255					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1210815310478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.46	1	50.851	50.351	51.351	1.3911								0	0	0	1.0178	1	20705	20705		0	0	1				5053	1957	2502	2518	6256	6256					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1210815310478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.61	1	51.002	50.502	51.502	1.3911								0	0	0	1.0178	1	20769	20769		0	0	1				5054	1957	2502	2518	6257	6257					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1206848025322	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.847	1	51.238	50.738	51.738	1.3911								0	0	0	1.0178	1	20867	20867		0	0	1				5055	1957	2502	2518	6258	6258					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1212341189384	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.311	1	51.703	51.203	52.203	1.3921								0	0	0	1.0178	1	21057	21057		0	0	1				5056	1957	2502	2518	6259	6259					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208984255791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.428	1	51.822	51.322	52.322	1.3938								0	0	0	1.0178	1	21107	21107		0	0	1				5057	1957	2502	2518	6260	6260					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1209899783134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.528	1	51.922	51.422	52.422	1.3938								0	0	0	1.0178	1	21149	21149		0	0	1				5058	1957	2502	2518	6261	6261					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1200439333916	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.678	1	59.096	58.596	59.596	1.4181								0	0	0	1.0178	1	24182	24182		0	0	1				5059	1957	2502	2518	6262	6262					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1200744509697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.774	1	59.192	58.692	59.692	1.4181								0	0	0	1.0178	1	24223	24223		0	0	1				5060	1957	2502	2518	6263	6263					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1207763552666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.845	1	86.004	85.504	86.504	1.159								0	0	0	1.0178	1	35602	35602		0.69038	0	1				5061	1957	2502	2518	6264	6264					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1213256716728	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.875	1	93.746	93.246	94.246	0.87176								0	0	0	1.0178	1	39098	39098		0	0	1				5062	1957	2502	2518	6265	6265					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1219665408134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.984	1	93.856	93.356	94.356	0.87176								0	0	0	1.0178	1	39142	39142		0	0	1				5063	1957	2502	2518	6266	6266					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1215698122978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.277	1	94.149	93.649	94.649	0.87176								0	0	0	1.0178	1	39258	39258		0	0	1				5064	1957	2502	2518	6267	6267					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1212036013603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.473	1	94.345	93.845	94.845	0.87176								0	0	0	1.0178	1	39338	39338		0	0	1				5065	1957	2502	2518	6268	6268					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1213867068291	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.695	1	94.566	94.066	95.066	0.87176								0	0	0	1.0178	1	39428	39428		0	0	1				5066	1957	2502	2518	6269	6269					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1215392947197	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.3	1	95.041	94.541	95.541	0.74124								0	0	0	1.0178	1	39679	39679		0	0	1				5067	1957	2502	2518	6270	6270					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1213561892509	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.742	1	95.483	94.983	95.983	0.74124								0	0	0	1.0178	1	39857	39857		0	0	1				5068	1957	2502	2518	6271	6271					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1209899783134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.88	1	95.621	95.121	96.121	0.74124								0	0	0	1.0178	1	39914	39914		0	0	1				5069	1957	2502	2518	6272	6272					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1208068728447	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.004	1	95.745	95.245	96.245	0.74124								0	0	0	1.0178	1	39968	39968		0	0	1				5070	1957	2502	2518	6273	6273					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1205932497978	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.271	1	95.692	95.192	96.192	0.4212								0	0	0	1.0178	1	40089	40089		0	0	1				5071	1957	2502	2518	6274	6274					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1235534548759	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.463	1	95.884	95.384	96.384	0.4212								0	0	0	1.0178	1	40176	40176		0	0	1				5072	1957	2502	2518	6275	6275					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1241332888603	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.581	1	96.002	95.502	96.502	0.4212								0	0	0	1.0178	1	40225	40225		0	0	1				5073	1957	2502	2518	6276	6276					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	445.1230041384697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.706	1	96.127	95.627	96.627	0.4212								0	0	0	1.0178	1	40276	40276		0	0	1				5074	1957	2502	2518	6277	6277					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201049685478	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0093	1	4.7545	4.2545	5.2545	0.74525								0	0	0	1.0178	1	1662	1662		0	0	1				5075	1957	2502	2518	6278	6278					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201660037041	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8677	1	7.5984	7.0984	8.0984	0.73074								0	0	0	1.0178	1	2852	2852		0	0	1				5076	1957	2502	2518	6279	6279					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1200744509697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9644	1	7.6952	7.1952	8.1952	0.73074								0	0	0	1.0178	1	2892	2892		0	0	1				5077	1957	2502	2518	6280	6280					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201965212822	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1549	1	7.8856	7.3856	8.3856	0.73074								0	0	0	1.0178	1	2972	2972		0	0	1				5078	1957	2502	2518	6281	6281					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1199218630791	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2525	1	7.9833	7.4833	8.4833	0.73074								0	0	0	1.0178	1	3013	3013		0	0	1				5079	1957	2502	2518	6282	6282					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1197997927666	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5653	1	8.296	7.796	8.796	0.73074								0	0	0	1.0178	1	3142	3142		0	0	1				5080	1957	2502	2518	6283	6283					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1199523806572	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.874	1	8.6048	8.1048	9.1048	0.73074								0	0	0	1.0178	1	3270	3270		0	0	1				5081	1957	2502	2518	6284	6284					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1200744509697	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9786	1	8.7094	8.2094	9.2094	0.73074								0	0	0	1.0178	1	3314	3314		0	0	1				5082	1957	2502	2518	6285	6285					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1200134158134	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0707	1	8.8052	8.3052	9.3052	0.73452								0	0	0	1.0178	1	3352	3352		0	0	1				5083	1957	2502	2518	6286	6286					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201965212822	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.148	1	23.763	23.263	24.263	1.6158								0	0	0	1.0178	1	9239	9239		0	0	1				5084	1957	2502	2518	6287	6287					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201965212822	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.417	1	24.033	23.533	24.533	1.6158								0	0	0	1.0178	1	9355	9355		0	0	1				5085	1957	2502	2518	6288	6288					-0.2220008186685618
FDDGDCCD	8	Unmodified	_FDDGDCCD_					0	0	0		nc|ENSG00000116183|Q9BXP8-2|PAPPA2;PAPPA2|p.N1535Tfs*51|1|0.11|ENSG00000116183|chr1:176771068-176771069|-/CCCATCTCAACTCAGGCAAAGGAATGTCC|frameshift_variant;PAPPA2|p.V1663Nfs*17|1|0.4|ENSG00000116183|chr1:176791449-176791458|GTGGAGTACA/-|frameshift_variant;ENSG00000116183|ENST00000367662|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1209594607353	2	445.120568	888.226583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.458	1	59.426	58.926	59.926	1.9684								0	0	0	1.0178	1	24101	24101		0	0	1				5086	1957	2502	2518	6289	6289					-0.2220008186685618
FDFCCCCC	8	Unmodified	_FDFCCCCC_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.0797302126884	3	315.080696	942.220258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.364	1	56.774	56.274	57.274	1.4099								0	0	0	1.0178	1	23189	23189		0	0	1		+		5087	14342	2503	2519	6290	6290					-0.25316337895230845
FDFCCCCC	8	Unmodified	_FDFCCCCC_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.0799133181572	3	315.080696	942.220258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.536	1	56.946	56.446	57.446	1.4099								0	0	0	1.0178	1	23266	23266		0	0	1		+		5088	14342	2503	2519	6291	6291					-0.25316337895230845
FDPKQYGF	8	Unmodified	_FDPKQYGF_					0	0	0			REV__ENSG00000115526|ENST00000264249|CHST10	REV__ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2393676638603	2	501.239993	1000.46543	1.2854	0.00064431	-3.3305	-0.0016694	-2.045	-0.001025	501.2382731934013	31.801	0.38345	31.801	31.565	31.949	0					33	11	4	0	0	0	0.68174	2	13330	13280;13330		32.117	3.6301	1	4146600	+		5089	9441	2504	2520	6292;6293	6293					-0.034781905109070976
FDPKQYGF	8	Unmodified	_FDPKQYGF_					0	0	0			REV__ENSG00000115526|ENST00000264249|CHST10	REV__ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2401916384697	2	501.239993	1000.46543	1.7591	0.00088175	-3.1302	-0.001569	-1.3711	-0.00068724	501.2384375735469	31.478	0.30898	31.769	31.569	31.878	0.29086					21	9	3	0	0	0	0.88055	2	13178	13178;13232		8.5933	0.68312	1	1765700	+		5090	9441	2504	2520	6294;6295	6294					-0.034781905109070976
FDPLEGRGE	9	Unmodified	_FDPLEGRGE_					0	0	0			REV__ENSG00000110711|ENST00000279146|AIP	REV__ENSG00000110711|ENST00000279146|AIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2456542849541	2	510.243264	1018.47197	1.4313	0.00073031	-0.49376	-0.00025194	0.93754	0.00047837	510.2430119479328	28.303	0.8014	28.303	28.009	28.81	0					86	25	5	0	0	0	0.59568	1	12047	12047		11.495	1.4208	1	29051000	+		5091	9304	2505	2521	6296	6296					-0.03652297350186018
FDPLEGRGE	9	Unmodified	_FDPLEGRGE_					0	0	0			REV__ENSG00000110711|ENST00000279146|AIP	REV__ENSG00000110711|ENST00000279146|AIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2443725466728	2	510.243264	1018.47197	1.4704	0.00075027	-0.92328	-0.0004711	0.54715	0.00027918	510.24265203477955	27.151	0.53725	28.422	28.145	28.682	1.2715					25	17	2	0	0	0	0.67936	1	11474	11474		8.1555	1.4324	1	2582800	+		5092	9304	2505	2521	6297	6297					-0.03652297350186018
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2438537478447	2	510.243264	1018.47197	1.4313	0.00073031	-0.49376	-0.00025194	0.93754	0.00047837	510.2430119479328	28.303	0.8014	28.303	28.009	28.81	0					86	25	5	0	0	0	0.27057	6	11897	11773;11819;11857;11897;11938;11987		74.423	16.951	1	29051000	+		5093	11002	2506	2522	6298;6299;6300;6301;6302;6303	6301					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2441589236259	2	510.243264	1018.47197	1.4633	0.00074662	1.3924	0.00071047	2.8557	0.0014571	510.24396966461103	29.031	0.43094	29.031	28.81	29.241	0					28	13	3	0	0	0	0.83505	2	12124	12124;12180		18.146	2.2992	1	1136500	+		5094	11002	2506	2522	6304;6305	6304					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2447692751884	2	510.243264	1018.47197	1.4837	0.00075707	0.97622	0.00049811	2.4599	0.0012552	510.243762085772	29.487	0.64474	29.487	29.209	29.854	0					48	20	3	0	0	0	0.60369	3	12341	12293;12341;12392		39.95	5.1883	1	5197100	+		5095	11002	2506	2522	6306;6307;6308	6307					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2446166872978	2	510.243264	1018.47197	1.5233	0.00077725	0.91725	0.00046802	2.4405	0.0012453	510.24372876754654	30.361	0.73592	30.361	30.069	30.805	0					62	23	5	0	0	0	0.33907	5	12704	12658;12704;12755;12827;12880		68.081	8.0593	1	14209000	+		5096	11002	2506	2522	6309;6310;6311;6312;6313	6310					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.2436401247978	2	510.243264	1018.47197	1.1809	0.00060256	0.034007	1.7352E-05	1.2149	0.00061991	510.2432250176762	28.025	0.6082	28.296	28.059	28.668	0.27119					49	19	3	0	0	0	0.35495	4	11710	11662;11710;11761;11819		64.236	13.235	1	4508300	+		5097	11002	2506	2522	6314;6315;6316;6317	6315					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.2438842654228	2	510.243264	1018.47197	1.2475	0.00063653	1.5146	0.00077283	2.7621	0.0014094	510.2439793840848	29.281	0.51408	29.56	29.32	29.834	0.2793					33	16	3	0	0	0	0.76844	1	12258	12258		24.021	3.606	1	1060000	+		5098	11002	2506	2522	6318	6318					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.2437316775322	2	510.243264	1018.47197	1.2918	0.00065913	0.43562	0.00022227	1.7274	0.0008814	510.2436299900009	30.082	0.38152	30.367	30.175	30.557	0.2859					32	12	3	0	0	0	0.69649	3	12630	12582;12630;12677		30.637	4.3684	1	3693300	+		5099	11002	2506	2522	6319;6320;6321	6320					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2424499392509	2	510.243264	1018.47197	1.4704	0.00075027	-0.92328	-0.0004711	0.54715	0.00027918	510.24265203477955	27.151	0.53725	28.422	28.145	28.682	1.2715					25	17	2	0	0	0	0.62338	2	11355	11355;11406		37.974	5.1883	1	2582800	+		5100	11002	2506	2522	6322;6323	6322					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2443420290947	2	510.243264	1018.47197	1.272	0.00064905	0.70617	0.00036032	1.9782	0.0010094	510.2432314093864	29.063	0.30246	30.346	30.162	30.464	1.2825					21	9	3	0	0	0	0.87213	1	12166	12166		13.906	2.2658	1	1368900	+		5101	11002	2506	2522	6324	6324					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2422973513603	2	510.243264	1018.47197	0.96816	0.000494	0.19355	9.8757E-05	1.1617	0.00059276	510.2431080939804	26.666	0.46411	28.413	28.249	28.713	1.747					31	15	3	0	0	0	0.83505	2	11182	11182;11234		18.146	2.8979	1	1708800	+		5102	11002	2506	2522	6325;6326	6325					-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	510.243264	1018.47197	1.4313	0.00073031	-0.49376	-0.00025194	0.93754	0.00047837	510.2430119479328	28.303	0.8014	28.303	28.009	28.81	0	-0.055682	-0.00019811	NaN	74.423	86	25	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29051000	+		5103	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	510.243264	1018.47197	1.5233	0.00077725	0.91725	0.00046802	2.4405	0.0012453	510.24372876754654	30.361	0.73592	30.361	30.069	30.805	0	0.0003763	0.00019959	NaN	68.081	62	23	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14209000	+		5104	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	510.243264	1018.47197	1.4837	0.00075707	0.97622	0.00049811	2.4599	0.0012552	510.243762085772	29.487	0.64474	29.487	29.209	29.854	0	-0.061179	-0.00027058	NaN	39.95	48	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5197100	+		5105	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	510.243264	1018.47197	1.1809	0.00060256	0.034007	1.7352E-05	1.2149	0.00061991	510.2432250176762	28.025	0.6082	28.296	28.059	28.668	0.27119	-0.062345	0.00034047	NaN	74.423	49	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4508300	+		5106	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	510.243264	1018.47197	1.2918	0.00065913	0.43562	0.00022227	1.7274	0.0008814	510.2436299900009	30.082	0.38152	30.367	30.175	30.557	0.2859	0.0069553	-0.00029191	NaN	68.081	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3693300	+		5107	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	510.243264	1018.47197	1.4704	0.00075027	-0.92328	-0.0004711	0.54715	0.00027918	510.24265203477955	27.151	0.53725	28.422	28.145	28.682	1.2715	0.063423	-0.00063642	NaN	74.423	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2582800	+		5108	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	510.243264	1018.47197	1.272	0.00064905	0.70617	0.00036032	1.9782	0.0010094	510.2432314093864	29.063	0.30246	30.346	30.162	30.464	1.2825	-0.014838	-1.5813E-05	NaN	68.081	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1368900	+		5109	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	510.243264	1018.47197	0.96816	0.000494	0.19355	9.8757E-05	1.1617	0.00059276	510.2431080939804	26.666	0.46411	28.413	28.249	28.713	1.747	0.054604	0.00050328	NaN	74.423	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1708800	+		5110	11002	2506	2522							-0.036522973501973865
FDPLENER	8	Unmodified	_FDPLENER_					0	0	0			REV__ENSG00000170903|ENST00000301919|MSANTD4	REV__ENSG00000170903|ENST00000301919|MSANTD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	510.243264	1018.47197	1.0129	0.00051685	1.3304	0.00067882	2.3433	0.0011957	510.24376222790687	27.84	0.31092	29.615	29.385	29.696	1.7754	0.067094	9.0857E-05	NaN	39.95	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304660	+		5111	11002	2506	2522							-0.036522973501973865
FDPYRFVSLF	10	Unmodified	_FDPYRFVSLF_					0	0	0			REV__nc|ENSG00000079931|Q6UVY6-2|MOXD1	REV__nc|ENSG00000079931|Q6UVY6-2|MOXD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.951	1	6.951	6.451	7.451	0								0	0	0	0.66254	1	2856	2856		0.15932	0	1		+		5112	14397	2507	2523	6327	6327					0.011222740571838585
FDRFKVMKAKK	11	Unmodified	_FDRFKVMKAKK_					0	0	0		ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9430419802666	3	466.607713	1396.80131	2.7057	0.0012625	1.7566	0.00081963	4.4622	0.0020821	466.608691154326	83.989	0.27412	83.989	83.908	84.182	0					13	8	2	0	0	0	1.0388	1	34994	34994		0.50596	0.34663	1	596900			5113	4880	2508	2524	6328	6328					0.11878235675862925
FDRFKVMKAKK	11	Unmodified	_FDRFKVMKAKK_					0	0	0		ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	466.607713	1396.80131	3.1136	0.0014528	2.6738	0.0012476	5.7874	0.0027004	466.6091785284871	83.815	0.39951	84.085	83.985	84.385	0.27029	-0.05611	0.00077256	NaN	0.50596	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	489810			5114	4880	2508	2524							0.11878235675862925
FDRFKVMKAKK	11	Unmodified	_FDRFKVMKAKK_					0	0	0		ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	ENSG00000188846|ENST00000396203|RPL14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	466.607713	1396.80131	2.6805	0.0012507	2.468	0.0011516	5.1485	0.0024023	466.60895580439944	83.162	0.40047	84.35	84.083	84.483	1.1879	0.20875	0.00048438	NaN	0.50596	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594840			5115	4880	2508	2524							0.11878235675862925
FDRIKKVL	8	Unmodified	_FDRIKKVL_					0	0	0			REV__ENSG00000204610|ENST00000376694|TRIM15	REV__ENSG00000204610|ENST00000376694|TRIM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8237487673759	2	509.824027	1017.6335	2.3439	0.001195	-3.2377	-0.0016507	-0.89383	-0.00045569	509.8221744854012	91.646	0.47856	91.646	91.436	91.915	0					35	14	3	0	0	0	0.89176	1	38265	38265		0.79363	0	1	2556300	+		5116	11792	2509	2525	6329	6329					0.12538916473545214
FDRLDGSFFK	10	Unmodified	_FDRLDGSFFK_					0	0	0			REV__nc|ENSG00000111206|Q08050-3|FOXM1	REV__nc|ENSG00000111206|Q08050-3|FOXM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	411.2090331912041	3	411.208384	1230.60332	-0.26833	-0.00011034	1.6932	0.00069628	1.4249	0.00058594	411.2090610073268	22.69	0.74003	22.69	22.489	23.229	0					46	24	3	0	0	0	0.78827	1	9449	9449		13.519	0.66272	1	2785400	+		5117	8246	2510	2526	6330	6330					-0.0027548698230930313
FDSLVRFFA	9	Unmodified	_FDSLVRFFA_					0	0	0		ENST00000540453.5_1_12:69082797-69083453:+|nuORF	ENST00000540453.5_1_12:69082797-69083453:+|nuORF	ENST00000540453.5_1_12:69082797-69083453:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2980224490166	2	551.290017	1100.56548	3.2464	0.0017897	2.8347	0.0015628	6.0811	0.0033525	551.2899557301067	74.182	0.49227	75.5	75.218	75.711	1.318					57	15	5	0	0	0	0.37357	1	31166	31166		21.747	3.6003	1	10918000			5118	7214	2511	2527	6331	6331					0.019220468228922982
FDSRDRVAQ	9	Unmodified	_FDSRDRVAQ_					0	0	0			REV__ENST00000528098.5_1_11:57182763-57193651:-|nuORF	REV__ENST00000528098.5_1_11:57182763-57193651:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.2733032107353	2	547.272887	1092.53122	2.0632	0.0011291	-1.6636	-0.00091045	0.39956	0.00021867	547.2715703313069	55.435	0.28489	55.756	55.548	55.833	0.32088					15	8	2	0	0	0	0.77526	1	23232	23232		4.3292	0	1	769290	+		5119	13683	2512	2528	6332	6332					-0.011344013360030658
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	447.2910339236259	2	447.127339	892.240125	1.1322	0.00050622	-1.9233	-0.00085995	-0.79112	-0.00035373	447.12805370638426	98.571	0.13368	98.571	98.504	98.638	0					17	4	5	0	0	0	2.3239	1	41244	41244		0	0	1	39986000			5120	2599	2513	2529	6333	6333					-0.21030547359271168
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	447.2911254763603	2	447.127339	892.240125	1.1065	0.00049473	-1.2852	-0.00057464	-0.17871	-7.9907E-05	447.1282093764759	98.803	0.19093	98.803	98.686	98.877	0					21	6	4	0	0	0	2.3239	1	41290	41290		0	0	1	38139000			5121	2599	2513	2529	6334	6334					-0.21030547359271168
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	447.2913696169853	2	447.127339	892.240125	3.2629	0.0014589	-2.6352	-0.0011783	0.62765	0.00028064	447.12677216493523	98.503	0.14585	98.583	98.504	98.65	0.080368					13	5	3	0	0	0	2.3239	1	41208	41208		0	0	1	11089000			5122	2599	2513	2529	6335	6335					-0.21030547359271168
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	447.2917053103447	2	447.127339	892.240125	3.2665	0.0014605	-1.8663	-0.00083449	1.4002	0.00062605	447.12773686007324	98.723	0.13878	98.803	98.736	98.875	0.080376					12	4	3	0	0	0	2.3239	1	41314	41314		0	0	1	34446000			5123	2599	2513	2529	6336	6336					-0.21030547359271168
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	447.2920410037041	2	447.127339	892.240125	3.785	0.0016924	-1.2844	-0.00057428	2.5006	0.0011181	447.1271683731025	98.314	0.11745	98.541	98.439	98.556	0.22776					8	3	3	0	0	0	2.3239	1	41368	41368		0	0	1	5762500			5124	2599	2513	2529	6337	6337					-0.21030547359271168
FDTSCDCC	8	Unmodified	_FDTSCDCC_					0	0	0		nc|ENSG00000134216|Q9BZP6-3|CHIA;nc|ENSG00000134216|Q9BZP6-2|CHIA;ENSG00000134216|ENST00000369740|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	nc|ENSG00000134216|Q9BZP6-3|CHIA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	447.2930175662041	2	447.127339	892.240125	3.7501	0.0016768	-0.022687	-1.0144E-05	3.7275	0.0016666	447.1287999422669	98.514	0.19806	98.742	98.642	98.84	0.22776					20	6	4	0	0	0	2.3239	1	41473	41473		0	0	1	18907000			5125	2599	2513	2529	6338	6338					-0.21030547359271168
FDVVVFLFVYF	11	Unmodified	_FDVVVFLFVYF_					0	0	0		ENSG00000164096|ENST00000504110|C4orf3;nc|nan|Q8WVX3-2|C4orf3	ENSG00000164096|ENST00000504110|C4orf3	ENSG00000164096|ENST00000504110|C4orf3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.8769409060478	2	697.873382	1393.73221	2.3997	0.0016747	3.2272	0.0022522	5.6269	0.0039269	698.3774657992651	59.018	0.49437	59.344	58.994	59.489	0.32554					56	23	3	0	0	0	0.84637	1	24722	24722		13.042	1.5478	1	6903700			5126	3748	2514	2530	6339	6339					0.05109474927962765
FEAERNASHL	10	Unmodified	_FEAERNASHL_					0	0	0		ENSG00000163703|ENST00000452070|CRELD1;nc|ENSG00000163703|Q96HD1-2|CRELD1	ENSG00000163703|ENST00000452070|CRELD1	ENSG00000163703|ENST00000452070|CRELD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2848693728447	3	391.859755	1172.55744	1.9937	0.00078126	-1.6375	-0.00064168	0.35618	0.00013957	391.8594345188066	76.788	0.46928	78.082	77.857	78.326	1.2938					21	14	2	0	0	0	0.1256	1	32271	32271		0.13989	0	1	1123800			5127	3716	2515	2531	6340	6340					-0.021941321645272183
FEAGIKIIAL	10	Unmodified	_FEAGIKIIAL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B;CACNA1B|p.Y1583Tfs*63|1|0.07|ENSG00000148408|chr9:138073559-138073559|C/-|frameshift_variant;CACNA1A|p.I219Lfs*19|1|0.35|ENSG00000141837|chr19:13365429-13365447|GATCATCGCCTTCATGATC/-|frameshift_variant;CACNA1A|p.L630Ffs*11|1|0.08|ENSG00000141837|chr19:13308146-13308147|-/G|frameshift_variant;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8343383669853	2	537.831517	1073.64848	2.8457	0.0015305	1.3488	0.00072542	4.1945	0.0022559	537.8321975997591	72.311	0.49617	74.121	73.952	74.448	1.8101					27	15	3	0	0	0	0.31869	1	30348	30348		38.176	1.6694	1	1517100			5128	3210	2516	2532	6341	6341					0.11460363550872898
FEAGIKIIAL	10	Unmodified	_FEAGIKIIAL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B;CACNA1B|p.Y1583Tfs*63|1|0.07|ENSG00000148408|chr9:138073559-138073559|C/-|frameshift_variant;CACNA1A|p.I219Lfs*19|1|0.35|ENSG00000141837|chr19:13365429-13365447|GATCATCGCCTTCATGATC/-|frameshift_variant;CACNA1A|p.L630Ffs*11|1|0.08|ENSG00000141837|chr19:13308146-13308147|-/G|frameshift_variant;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	537.831517	1073.64848	2.4937	0.0013412	-0.62114	-0.00033407	1.8725	0.0010071	537.8313108569699	73.973	0.28627	74.298	74.105	74.391	0.32494	0.098389	-0.0014965	NaN	38.176	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288940			5129	3210	2516	2532							0.11460363550872898
FEAGIKIIAL	10	Unmodified	_FEAGIKIIAL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B;CACNA1B|p.Y1583Tfs*63|1|0.07|ENSG00000148408|chr9:138073559-138073559|C/-|frameshift_variant;CACNA1A|p.I219Lfs*19|1|0.35|ENSG00000141837|chr19:13365429-13365447|GATCATCGCCTTCATGATC/-|frameshift_variant;CACNA1A|p.L630Ffs*11|1|0.08|ENSG00000141837|chr19:13308146-13308147|-/G|frameshift_variant;nc|ENSG00000141837|O00555-5|CACNA1A;nc|ENSG00000141837|O00555-3|CACNA1A;nc|ENSG00000141837|O00555-2|CACNA1A;nc|ENSG00000141837|O00555-6|CACNA1A;nc|ENSG00000141837|O00555-4|CACNA1A;ENSG00000141837|ENST00000360228|CACNA1A	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	537.831517	1073.64848	3.5987	0.0019355	0.6192	0.00033303	4.2179	0.0022685	537.8315716614549	72.85	0.43838	74.179	73.943	74.381	1.3297	-0.02001	-0.00016234	NaN	38.176	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1704400			5130	3210	2516	2532							0.11460363550872898
FEAKKTQNVKQ	11	Unmodified	_FEAKKTQNVKQ_					0	0	0			REV__ENSG00000164221|ENST00000379611|CCDC112	REV__ENSG00000164221|ENST00000379611|CCDC112	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	440.9142944216728	3	440.91386	1319.71975	1.0692	0.00047141	0.33459	0.00014753	1.4038	0.00061894	440.91398855702994	20.473	0.38073	20.683	20.44	20.821	0.21024					24	11	3	0	0	0	0.89659	1	8496	8496		10.016	1.7298	1	1288300	+		5131	10726	2517	2533	6342	6342					0.07267831517606282
FEAKKTQNVKQ	11	Unmodified	_FEAKKTQNVKQ_					0	0	0			REV__ENSG00000164221|ENST00000379611|CCDC112	REV__ENSG00000164221|ENST00000379611|CCDC112	MSMS	GG20161007_CRH_Patient100_W632_01	3	440.9147521853447	3	440.91386	1319.71975	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.559	1	20.617	20.117	21.117	1.0585								0	0	0	0.63775	1	8146	8146		1.7824	0.56759	1		+		5132	10726	2517	2533	6343	6343					0.07267831517606282
FEAKKTQNVKQ	11	Unmodified	_FEAKKTQNVKQ_					0	0	0			REV__ENSG00000164221|ENST00000379611|CCDC112	REV__ENSG00000164221|ENST00000379611|CCDC112	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.9143859744072	3	440.91386	1319.71975	0.48913	0.00021567	1.113	0.00049072	1.6021	0.00070639	440.91426171839726	19.056	0.34237	20.58	20.411	20.753	1.5237					27	10	4	0	0	0	0.83819	1	7942	7942		13.535	8.0116	1	1923600	+		5133	10726	2517	2533	6344	6344					0.07267831517606282
FEAKKTQNVKQ	11	Unmodified	_FEAKKTQNVKQ_					0	0	0			REV__ENSG00000164221|ENST00000379611|CCDC112	REV__ENSG00000164221|ENST00000379611|CCDC112	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	440.91386	1319.71975	1.0692	0.00047141	0.33459	0.00014753	1.4038	0.00061894	440.91398855702994	20.473	0.38073	20.683	20.44	20.821	0.21024	0.051751	-0.00055141	NaN	13.535	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1288300	+		5134	10726	2517	2533							0.07267831517606282
FEDFLKERA	9	Unmodified	_FEDFLKERA_					0	0	0		ENST00000587042.1_1_18:43591047-43652154:-|nuORF;nc|ENSG00000152229|Q9H939-2|PSTPIP2;ENSG00000152229|ENST00000409746|PSTPIP2	ENST00000587042.1_1_18:43591047-43652154:-|nuORF	ENST00000587042.1_1_18:43591047-43652154:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.7964355349541	2	577.795663	1153.57677	2.4625	0.0014228	-1.6133	-0.00093213	0.84925	0.00049069	577.7947907390611	44.613	0.28432	45.978	45.804	46.088	1.3653					15	8	2	0	0	0	0.50272	1	18669	18669		15.248	2.206	1	1252500			5135	3316	2518	2534	6345	6345					0.006128241263922973
FEDVAVFFTQ	10	Unmodified	_FEDVAVFFTQ_					0	0	0		ENSG00000136870|ENST00000339664|ZNF189	ENSG00000136870|ENST00000339664|ZNF189	ENSG00000136870|ENST00000339664|ZNF189	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.7900878787041	2	601.790047	1201.56554	3.6945	0.0022233	-3.2641	-0.0019643	0.43041	0.00025902	601.7870677849402	82.437	0.3202	83.649	83.443	83.763	1.2125					16	9	2	0	0	0	0.65659	1	34616	34616		20.415	1.1575	1	1162900			5136	2744	2519	2535	6346	6346					-0.02717997967761221
FEDVAVFFTQ	10	Unmodified	_FEDVAVFFTQ_					0	0	0		ENSG00000136870|ENST00000339664|ZNF189	ENSG00000136870|ENST00000339664|ZNF189	ENSG00000136870|ENST00000339664|ZNF189	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.7913696169853	2	601.790047	1201.56554	3.778	0.0022736	-2.0271	-0.0012199	1.7509	0.0010537	601.7891560137617	81.964	0.25267	83.634	83.482	83.734	1.67					12	7	2	0	0	0	0.21003	1	34402	34402		47.749	15.443	1	658530			5137	2744	2519	2535	6347	6347					-0.02717997967761221
FEHSWAAATTF	11	Unmodified	_FEHSWAAATTF_					0	0	0			REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.2941772341728	2	634.290745	1266.56694	2.4502	0.0015541	3.1763	0.0020147	5.6265	0.0035688	634.2917227212464	62.478	0.28012	64.423	64.284	64.564	1.9444					17	8	3	0	0	0	0.58697	1	26229	26229		21.537	0	1	1653200	+		5138	13456	2520	2536	6348	6348					-0.055683638790242185
FEHSWAAATTF	11	Unmodified	_FEHSWAAATTF_					0	0	0			REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	634.290745	1266.56694	2.6426	0.0016762	2.6714	0.0016945	5.314	0.0033706	634.2916444301311	63.014	0.33982	64.427	64.226	64.566	1.4134	0.0022371	-0.00022424	NaN	21.537	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	767200	+		5139	13456	2520	2536							-0.055683638790242185
FEHSWAAATTF	11	Unmodified	_FEHSWAAATTF_					0	0	0			REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	REV__ENST00000494995.5_1_1:155580896-155583988:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	634.290745	1266.56694	2.4502	0.0015541	3.1763	0.0020147	5.6265	0.0035688	634.2917227212464	62.478	0.28012	64.423	64.284	64.564	1.9444	-0.0022371	0.00041619	NaN	21.537	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1653200	+		5140	13456	2520	2536							-0.055683638790242185
FELFLTVWVGM	11	Unmodified	_FELFLTVWVGM_					0	0	0			REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6	REV__nc|ENSG00000177119|Q4KMQ2-3|ANO6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	671.8526489138603	2	671.349217	1340.68388	1.6225	0.0010892	1.6074	0.0010791	3.2299	0.0021684	671.3508727555502	43.013	0.26862	44.935	44.781	45.049	1.9211					24	8	4	0	0	0	0.98155	1	18055	18055		4.897	0	1	2516800	+		5141	11208	2521	2537	6349	6349					0.02716658016333895
FENKILDML	9	Oxidation (M)	_FENKILDM(Oxidation (M))L_		FENKILDM(1)L		FENKILDM(44)L	0	0	1			REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.7943603396416	2	569.794275	1137.574	1.8372	0.0010468	-2.0387	-0.0011616	-0.20145	-0.00011479	569.7930547218796	72.485	0.40654	72.81	72.547	72.954	0.32494					36	12	4	0	0	0	0.11643	1	30349	30349		43.858	11.553	1	7861900	+		5142	15337	2522	2538	6350	6350		125			0.01071232677190892
FENQFVFDF	9	Unmodified	_FENQFVFDF_					0	0	0		tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7707397341728	2	596.769114	1191.52368	0.73877	0.00044087	2.019	0.0012049	2.7578	0.0016458	596.7704903079608	57.919	0.85172	59.889	59.606	60.457	1.969					95	28	5	0	0	0	0.007852	2	24309	24309;24431		111.29	7.9335	1	58544000			5143	16216	2523	2539	6351;6352	6351					-0.06442553656279415
FEPRSAPFP	9	Unmodified	_FEPRSAPFP_					0	0	0			REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2675659060478	2	524.266542	1046.51853	2.2312	0.0011698	-0.16364	-8.5789E-05	2.0676	0.001084	524.2665880242425	41.553	2.8181	42.878	41.498	44.316	1.3254					165	89	2	0	0	0	0.44512	3	17720	16982;17720;17851		18.146	5.9057	1	1684100	+		5144	14022	2524	2540	6353;6354;6355	6354					-0.0028681272824542248
FEPRSAPFP	9	Unmodified	_FEPRSAPFP_					0	0	0			REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2661620974541	2	524.266542	1046.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.118	1	41.428	40.928	41.928	1.3102								0	0	0	0.38683	1	16827	16827		10.074	1.3285	1		+		5145	14022	2524	2540	6356	6356					-0.0028681272824542248
FEPRSAPFP	9	Unmodified	_FEPRSAPFP_					0	0	0			REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2682372927666	2	524.266542	1046.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.219	1	44.573	44.073	45.073	1.3536								0	0	0	0.38683	1	18114	18114		10.074	1.3285	1		+		5146	14022	2524	2540	6357	6357					-0.0028681272824542248
FEPRSAPFP	9	Unmodified	_FEPRSAPFP_					0	0	0			REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	REV__ENST00000590627.5_1_19:13002616-13004571:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2675659060478	2	524.266542	1046.51853	1.9656	0.0010305	-0.70862	-0.0003715	1.257	0.00065901	524.2663028820707	41.219	2.5845	43.111	41.645	44.229	1.8927					159	82	3	0	0	0	0.27148	3	17029	16839;17029;17481		26.884	4.1474	1	1760200	+		5147	14022	2524	2540	6358;6359;6360	6359					-0.0028681272824542248
FEQNQDPKH	9	Unmodified	_FEQNQDPKH_					0	0	0		ENSG00000122824|ENST00000356450|NUDT10	ENSG00000122824|ENST00000356450|NUDT10	ENSG00000122824|ENST00000356450|NUDT10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5090820193291	3	381.512355	1141.51524	0.47591	0.00018157	-3.4865	-0.0013301	-3.0105	-0.0011486	381.5113313478704	23.025	1.6605	24.239	23.736	25.397	1.2145					71	53	2	0	0	0	0.70577	1	9946	9946		7.1017	0.89594	1	980710			5148	2171	2525	2541	6361	6361					-0.04986107572926812
FEREVLFVFIL	11	Unmodified	_FEREVLFVFIL_					0	0	0			REV__nc|ENSG00000170379|A6NFQ2-3|TCAF2	REV__nc|ENSG00000170379|A6NFQ2-3|TCAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2735778689384	3	471.270984	1410.79112	2.8275	0.0013325	-0.069363	-3.2689E-05	2.7581	0.0012998	471.27070156353085	64.301	0.59905	66.229	65.888	66.487	1.928					38	18	3	0	0	0	0.96769	1	26981	26981		2.6312	0.19645	1	1521900	+		5149	14485	2526	2542	6362	6362					0.10215951222289732
FERHKLLF	8	Unmodified	_FERHKLLF_					0	0	0		nc|ENSG00000183914|Q9P225-2|DNAH2;ENSG00000183914|ENST00000572933|DNAH2;DNAH10|p.N3904Vfs*37|1|0.07|ENSG00000197653|chr12:123926777-123926778|-/GGTACAGAGAAGTCCCTGCC|frameshift_variant;nc|ENSG00000197653|Q8IVF4|DNAH10;ENSG00000197653|ENST00000673944|DNAH10	nc|ENSG00000183914|Q9P225-2|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3179199099541	2	545.313826	1088.6131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.719	1	73.543	73.043	74.043	1.824								0	0	0	1.0178	1	30087	30087		5.7604	0	1				5150	4675	2527	2543	6363	6363					0.0723374581373264
FERHLQIHLIT	11	Unmodified	_FERHLQIHLIT_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	352.4513732790947	4	352.453031	1405.78302	-0.1977	-6.9679E-05	-2.7222	-0.00095944	-2.9199	-0.0010291	352.45228500621016	11.83	0.18551	11.919	11.805	11.99	0.089381					10	5	3	0	0	0	0.9945	1	4905	4905		4.1166	0	1	448070			5151	3294	2528	2544	6364	6364					0.09635817025537108
FERHLQIHLIT	11	Unmodified	_FERHLQIHLIT_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	352.453031	1405.78302	-1.5894	-0.0005602	-2.5112	-0.00088509	-4.1006	-0.0014453	352.452187270939	11.436	0.15624	12.105	12.013	12.169	0.66934	0.14931	-0.0011978	NaN	4.1166	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335470			5152	3294	2528	2544							0.09635817025537108
FERHLQIHLIT	11	Unmodified	_FERHLQIHLIT_					0	0	0		nc|ENSG00000151612|Q17R98-3|ZNF827;nc|ENSG00000151612|Q17R98-2|ZNF827;ENSG00000151612|ENST00000508784|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	nc|ENSG00000151612|Q17R98-3|ZNF827	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	352.453031	1405.78302	-0.37431	-0.00013193	-2.0465	-0.00072129	-2.4208	-0.00085322	352.4523628186556	11.264	0.15745	12.026	11.941	12.099	0.76165	0.07027	-0.00054263	NaN	4.1166	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271160			5153	3294	2528	2544							0.09635817025537108
FERKFRILLWR	11	Unmodified	_FERKFRILLWR_					0	0	0			REV__ENSG00000121749|ENST00000485960|TBC1D15	REV__ENSG00000121749|ENST00000485960|TBC1D15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	782.4723388552666	2	782.46717	1562.91979	2.506	0.0019608	4.3441	0.0033991	6.8501	0.0053599	782.4707872948995	85.024	0.21236	86.621	86.514	86.727	1.5962					16	8	3	0	0	0	1.0395	1	35687	35687		0.30703	0.30703	1	9056200	+		5154	9595	2529	2545	6365	6365					0.1608435097587062
FERPEDVEV	9	Unmodified	_FERPEDVEV_					0	0	0			REV__PERP-TULP1|1|fusion	REV__PERP-TULP1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.3143188357353	2	560.269478	1118.5244	3.0007	0.0016812	3.7677	0.0021109	6.7683	0.0037921	560.7737797583025	61.602	0.24757	63.02	62.865	63.113	1.4177					10	7	2	0	0	0	0.10844	1	25864	25864		16.942	4.4107	1	332430	+		5155	9351	2530	2546	6366	6366					-0.03011759007222281
FESIKTINIAW	11	Unmodified	_FESIKTINIAW_					0	0	0			REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.2431823611259	3	441.243206	1320.70779	1.7763	0.00078379	-2.3342	-0.0010299	-0.55788	-0.00024616	441.5763907562529	33.463	0.40845	33.76	33.585	33.994	0.29701					31	13	3	0	0	0	1.0214	1	14030	14030		1.0136	0	1	1637000	+		5156	15556	2531	2547	6367	6367					0.060262147744197136
FESIKTINIAW	11	Unmodified	_FESIKTINIAW_					0	0	0			REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2406188845634	3	441.243206	1320.70779	0.96638	0.00042641	-2.5979	-0.0011463	-1.6315	-0.00071988	441.24197892057305	31.877	0.35902	33.702	33.536	33.895	1.8246					23	13	3	0	0	0	0.99329	1	13341	13341		3.5927	0	1	1284600	+		5157	15556	2531	2547	6368	6368					0.060262147744197136
FEVNLNKAF	9	Unmodified	_FEVNLNKAF_					0	0	0			REV__nc|ENSG00000178460|Q4G0Z9-3|MCMDC2	REV__nc|ENSG00000178460|Q4G0Z9-3|MCMDC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	360.5744506716728	3	361.194075	1080.5604	0.13057	4.716E-05	1.7535	0.00063336	1.8841	0.00068052	361.1948967563169	22.441	0.27531	24.057	23.89	24.165	1.6158					21	8	3	0	0	0	0.11909	1	9344	9344		2.4985	0.65425	1	1932700	+		5158	11248	2532	2548	6369	6369					0.023337429602634074
FEYDNKDPT	9	Unmodified	_FEYDNKDPT_					0	0	0			REV__ENSG00000074695|ENST00000251047|LMAN1	REV__ENSG00000074695|ENST00000251047|LMAN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.3032714724541	2	564.745836	1127.47712	2.6014	0.0014691	-2.924	-0.0016513	-0.32258	-0.00018217	564.7442655719128	78.115	0.26822	79.396	79.259	79.527	1.2809					18	8	3	0	0	0	0.10844	1	32826	32826		16.942	4.4107	1	1101600	+		5159	8752	2533	2549	6370	6370					-0.0815203827824007
FEYLIETLN	9	Unmodified	_FEYLIETLN_					0	0	0		ENSG00000136381|ENST00000258886|IREB2;nc|ENSG00000136381|P48200-2|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1141.580493152142	1	1141.57757	1140.57029	2.08	0.0023745	0.97579	0.0011139	3.0558	0.0034884	1141.5782027090406	75.85	0.42805	77.143	76.943	77.371	1.2938					31	13	3	0	0	0	0.049839	1	31860	31860		68.081	6.7232	1	7038800			5160	2722	2534	2550	6371	6371					0.00562886175021049
FFAGLVPRL	9	Unmodified	_FFAGLVPRL_					0	0	0		MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant;ENSG00000109919|ENST00000302503|MTCH2	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3069335818291	2	510.30547	1018.59639	3.4268	0.0017487	1.6047	0.00081888	5.0315	0.0025676	510.3058713312111	74.828	0.49888	76.134	75.905	76.404	1.3063					28	15	4	0	0	0	0.19075	2	31401	31401;31456		34.102	7.7612	1	5929000			5161	1685	2535	2551	6372;6373	6372					0.08783244927803935
FFAGLVPRL	9	Unmodified	_FFAGLVPRL_					0	0	0		MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant;ENSG00000109919|ENST00000302503|MTCH2	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.3068725466728	2	510.30547	1018.59639	3.217	0.0016417	0.99717	0.00050886	4.2142	0.0021505	510.30536617370797	74.384	0.44211	76.18	75.929	76.371	1.7962					20	13	2	0	0	0	0.27148	1	31258	31258		26.884	0.54238	1	4223200			5162	1685	2535	2551	6374	6374					0.08783244927803935
FFAIFALYFVF	11	Unmodified	_FFAIFALYFVF_					0	0	0		tr|A0A553SGP8|A0A553SGP8_NIACINCS2familypermeaseOS=NialliacirculansOX=1397GN=CEQ21_11280PE=3SV=1	tr|A0A553SGP8|A0A553SGP8_NIACINCS2familypermeaseOS=NialliacirculansOX=1397GN=CEQ21_11280PE=3SV=1	tr|A0A553SGP8|A0A553SGP8_NIACINCS2familypermeaseOS=NialliacirculansOX=1397GN=CEQ21_11280PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	692.8704101443291	2	692.870643	1383.72673	2.9314	0.0020311	-3.0498	-0.0021131	-0.11839	-8.2032E-05	692.8684274528998	81.345	0.52576	82.579	82.348	82.873	1.2332					45	16	3	0	0	0	0.57967	1	34142	34142		21.747	2.3847	1	10840000			5163	16116	2536	2552	6375	6375					0.050217961360885965
FFAWRYHVGKW	11	Unmodified	_FFAWRYHVGKW_					0	0	0			REV__nc|ENSG00000130347|Q8WWV3-2|RTN4IP1	REV__nc|ENSG00000130347|Q8WWV3-2|RTN4IP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.9437133669853	4	374.945108	1495.75132	-1.6158	-0.00060585	-2.5764	-0.000966	-4.1922	-0.0015719	374.9442442943874	15.672	0.49579	15.672	15.497	15.993	0					49	15	6	0	0	0	1.0357	1	6508	6508		1.4551	0.12547	1	9390200	+		5164	9782	2537	2553	6376	6376					0.023278690621964415
FFCSMRCR	8	Unmodified	_FFCSMRCR_					0	0	0		nc|ENSG00000214300|A6NKU9-2|SPDYE3;nc|ENSG00000286014|P0DUD4|SPDYE15;nc|ENSG00000184616|P0DUX1|SPDYE12;ENSG00000273520|ENST00000333385|SPDYE8;ENSG00000262461|ENST00000575125|SPDYE9;ENSG00000186645|ENST00000671986|SPDYE17;ENSG00000214300|ENST00000332397|SPDYE3	nc|ENSG00000214300|A6NKU9-2|SPDYE3	nc|ENSG00000214300|A6NKU9-2|SPDYE3	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2275878787041	2	525.227525	1048.4405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.926	1	50.926	50.426	51.426	0								0	0	0	1.0178	1	21241	21241		5.7604	1.4312	1				5165	4799	2538	2554	6377	6377					-0.08178608181128766
FFDANGAN	8	Unmodified	_FFDANGAN_					0	0	0			REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	428.1852294802666	2	428.185217	854.355882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.19	1	104.19	103.69	104.69	0								0	0	0	1.0178	1	43927	43927		5.2307	2.6532	1		+		5166	13368	2539	2555	6378	6378					-0.0771219613023959
FFDANGAN	8	Unmodified	_FFDANGAN_					0	0	0			REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	428.1873657107353	2	428.185217	854.355882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.18	1	104.24	103.74	104.74	0.059502								0	0	0	1.0178	1	43884	43884		8.5933	3.3626	1		+		5167	13368	2539	2555	6379	6379					-0.0771219613023959
FFDANGAN	8	Unmodified	_FFDANGAN_					0	0	0			REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	428.1859619021416	2	428.185217	854.355882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.13	1	104.29	103.79	104.79	0.16055								0	0	0	1.0178	1	44052	44052		5.2307	2.6532	1		+		5168	13368	2539	2555	6380	6380					-0.0771219613023959
FFDANGAN	8	Unmodified	_FFDANGAN_					0	0	0			REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	REV__ENST00000482108.1_2_7:94295300-94295441:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	428.1870300173759	2	428.185217	854.355882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.08	1	104.25	103.75	104.75	0.1731								0	0	0	1.0178	1	43965	43965		5.2307	2.6532	1		+		5169	13368	2539	2555	6381	6381					-0.0771219613023959
FFEGFPDKQPR	11	Unmodified	_FFEGFPDKQPR_					0	0	0		ENSG00000196154|ENST00000368716|S100A4	ENSG00000196154|ENST00000368716|S100A4	ENSG00000196154|ENST00000368716|S100A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.6736328005791	4	342.674023	1366.66699	1.6178	0.00055439	-0.46013	-0.00015767	1.1577	0.00039672	342.6732509103497	61.233	0.25048	61.563	61.391	61.641	0.32974					11	7	2	0	0	0	1.0362	1	25663	25663		0.45452	0.046251	1	801510			5170	4917	2540	2556	6382	6382					-0.0016812654521345394
FFEHDWKGEDK	11	Unmodified	_FFEHDWKGEDK_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|335|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|335|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|335|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.8865844607353	3	479.88597	1436.63608	2.4621	0.0011815	-1.3743	-0.00065948	1.0878	0.00052204	480.2196914020858	82.895	0.33823	82.895	82.706	83.045	0					25	10	3	0	0	0	1.0156	1	34524	34524		2.8433	0	1	1787000			5171	7638	2541	2557	6383	6383					-0.06477324650086302
FFFFFFLKRER	11	Unmodified	_FFFFFFLKRER_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|16|2|anti-sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|16|2|anti-sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|16|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.7797729372978	3	528.62224	1582.84489	1.0904	0.00057639	-1.6216	-0.0008572	-0.53122	-0.00028081	528.621068016115	52.859	0.46859	54.828	54.542	55.011	1.9697					34	23	2	0	0	0	0.14606	1	22220	22220		1.4551	1.3603	1	4865900			5172	38	2542	2558	6384	6384					0.0767816844461322
FFFHLLGGAD	10	Unmodified	_FFFHLLGGAD_					0	0	0		OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant;ENSG00000172742|ENST00000641962|OR4D9	OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant	OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.8224365115166	2	562.282192	1122.54983	1.485	0.00083499	0.27768	0.00015613	1.7627	0.00099113	562.2822656488278	58.322	0.33817	60.291	60.148	60.487	1.969					17	10	2	0	0	0	0.12302	1	24484	24484		32.305	0	1	1511000			5173	8045	2543	2559	6385	6385					-0.006542396941085826
FFFPLILIM	9	Unmodified	_FFFPLILIM_					0	0	0			REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8328735232353	2	570.829932	1139.64531	2.4327	0.0013887	2.9767	0.0016992	5.4094	0.0030878	570.8320050593974	44.345	0.32193	45.711	45.545	45.867	1.3653					22	9	3	0	0	0	0.51832	2	18564	18564;18613		14.582	2.341	1	1821400	+		5174	12641	2544	2560	6386;6387	6386					0.08107397172557285
FFFPLILIM	9	Unmodified	_FFFPLILIM_					0	0	0			REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8336059451103	2	570.829932	1139.64531	2.1708	0.0012392	1.9708	0.001125	4.1417	0.0023642	570.8317292406879	43.677	0.31446	45.621	45.485	45.799	1.9438					22	9	3	0	0	0	0.24585	2	18350	18301;18350		28.173	7.7587	1	1278500	+		5175	12641	2544	2560	6388;6389	6389					0.08107397172557285
FFFPLILIM	9	Unmodified	_FFFPLILIM_					0	0	0			REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	570.829932	1139.64531	2.4327	0.0013887	2.9767	0.0016992	5.4094	0.0030878	570.8320050593974	44.345	0.32193	45.711	45.545	45.867	1.3653	0.044764	0.00064319	NaN	28.173	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1821400	+		5176	12641	2544	2560							0.08107397172557285
FFFPLILIM	9	Unmodified	_FFFPLILIM_					0	0	0			REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	REV__ENST00000368655.4_1_1:153781276-153781465:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	570.829932	1139.64531	2.1708	0.0012392	1.9708	0.001125	4.1417	0.0023642	570.8317292406879	43.677	0.31446	45.621	45.485	45.799	1.9438	-0.044764	-0.00050517	NaN	28.173	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1278500	+		5177	12641	2544	2560							0.08107397172557285
FFGYISVI	8	Unmodified	_FFGYISVI_					0	0	0			REV__tr|A0A7D7A3S5|A0A7D7A3S5_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00905PE=4SV=1	REV__tr|A0A7D7A3S5|A0A7D7A3S5_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.5048095583916	1	945.508032	944.500755	3.1722	0.0029994	0.24425	0.00023094	3.4165	0.0032303	945.5042263640862	73.781	0.43153	75.578	75.347	75.778	1.7962					27	13	3	0	0	0	0.6384	1	30987	30987		36.466	0.42194	1	1977200	+		5178	15866	2545	2561	6390	6390					0.026284720168973763
FFHLWLKV	8	Unmodified	_FFHLWLKV_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|19|1|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|19|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3169433474541	2	545.315838	1088.61712	1.3153	0.00071727	1.2847	0.00070058	2.6	0.0014178	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.89176	1	29331	29331		0.79363	0	1	2013200	+		5179	14211	2546	2562	6391	6391					0.07635835307473826
FFIAGRYEF	9	Unmodified	_FFIAGRYEF_					0	0	0		nc|ENSG00000104812|P13807-2|GYS1;ENSG00000104812|ENST00000323798|GYS1	nc|ENSG00000104812|P13807-2|GYS1	nc|ENSG00000104812|P13807-2|GYS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2914306521416	2	575.290017	1148.56548	2.4264	0.0013959	-0.44086	-0.00025362	1.9855	0.0011422	575.2896757843386	59.59	0.55922	61.009	60.769	61.328	1.4196					50	17	4	0	0	0	0.093059	2	25015	24975;25015		51.63	13.479	1	12785000			5180	1476	2547	2563	6392;6393	6393					-0.0028595317710369272
FFIAGRYEF	9	Unmodified	_FFIAGRYEF_					0	0	0		nc|ENSG00000104812|P13807-2|GYS1;ENSG00000104812|ENST00000323798|GYS1	nc|ENSG00000104812|P13807-2|GYS1	nc|ENSG00000104812|P13807-2|GYS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2914306521416	2	575.290017	1148.56548	2.5502	0.0014671	-0.65158	-0.00037485	1.8987	0.0010923	575.2897876894547	59.113	0.53138	61.082	60.814	61.345	1.969					53	16	4	0	0	0	0.036104	3	24842	24755;24802;24842		79.596	33.018	1	13639000			5181	1476	2547	2563	6394;6395;6396	6396					-0.0028595317710369272
FFIRLASLCKR	11	Unmodified	_FFIRLASLCKR_					0	0	0		ENST00000359039.4_1_9:21334854-21334980:-|nuORF	ENST00000359039.4_1_9:21334854-21334980:-|nuORF	ENST00000359039.4_1_9:21334854-21334980:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9342224001884	3	451.932309	1352.7751	2.412	0.0010901	1.4031	0.00063409	3.8151	0.0017241	451.93304441998373	84.325	1.0391	85.921	85.18	86.219	1.5962					54	33	3	0	0	0	1.0373	1	35123	35123		0.32927	0.23443	1	3153200			5182	6017	2548	2564	6397	6397					0.11281966504361662
FFISDIKY	8	Unmodified	_FFISDIKY_					0	0	0		ENST00000308580.11_1_15:52203502-52203610:+|nuORF	ENST00000308580.11_1_15:52203502-52203610:+|nuORF	ENST00000308580.11_1_15:52203502-52203610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1032.547900378704	1	1032.54006	1031.53278	5.0108	0.0051739	0.48342	0.00049915	5.4942	0.005673	1032.5399891531388	89.74	0.34901	91.145	90.955	91.304	1.4045					14	10	2	0	0	0	0.72134	1	37824	37824		28.173	5.0248	1	1194200			5183	5788	2549	2565	6398	6398					0.018278397000358382
FFKIFPLL	8	Unmodified	_FFKIFPLL_					0	0	0		ENST00000530314.5_1_16:70543112-70557304:-|nuORF;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4;nc|ENSG00000103051|Q9H9E3|COG4;ENSG00000103051|ENST00000323786|COG4	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2125427126884	3	342.212518	1023.61573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.626	1	19.82	19.32	20.32	0.19342								0	0	0	1.0178	1	8154	8154		0.45834	0	1				5184	1415	2550	2566	6399	6399					0.10486201218714086
FFKIFPLL	8	Unmodified	_FFKIFPLL_					0	0	0		ENST00000530314.5_1_16:70543112-70557304:-|nuORF;ENST00000562200.5_1_16:70543798-70557434:-|nuORF;nc|ENSG00000103051|Q9H9E3-2|COG4;nc|ENSG00000103051|Q9H9E3-3|COG4;nc|ENSG00000103051|Q9H9E3|COG4;ENSG00000103051|ENST00000323786|COG4	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	ENST00000530314.5_1_16:70543112-70557304:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2123901247978	3	342.212518	1023.61573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.948	1	20.006	19.506	20.506	1.0585								0	0	0	1.0178	1	7896	7896		0.45834	0	1				5185	1415	2550	2566	6400	6400					0.10486201218714086
FFKPHWDEKF	10	Unmodified	_FFKPHWDEKF_					0	0	0		ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.2304870486259	3	460.896029	1379.66626	1.1792	0.00054348	-0.72861	-0.00033581	0.45057	0.00020766	461.22996818347167	37.78	0.4786	39.064	38.794	39.272	1.284					36	17	3	0	0	0	0.33908	1	15864	15864		36.955	22.737	1	4857000			5186	3235	2551	2567	6401	6401					-0.008389211942812835
FFKPHWDEKF	10	Unmodified	_FFKPHWDEKF_					0	0	0		ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	460.896029	1379.66626	1.0247	0.00047229	-0.51239	-0.00023616	0.51232	0.00023613	461.2299929531644	37.058	0.40693	38.877	38.689	39.096	1.8191	-0.093774	0.00012685	NaN	36.955	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5082400			5187	3235	2551	2567							-0.008389211942812835
FFKRNINRI	9	Unmodified	_FFKRNINRI_					0	0	0		ENST00000577961.5_1_18:723830-723905:-|nuORF	ENST00000577961.5_1_18:723830-723905:-|nuORF	ENST00000577961.5_1_18:723830-723905:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.3577148318291	2	604.356557	1206.69856	2.9898	0.0018069	-1.2162	-0.00073502	1.7736	0.0010719	604.3560061354474	87.189	0.82157	87.189	86.612	87.434	0					153	33	5	0	0	0	0.84963	1	36384	36384		0.6015	0.076735	1	97432000			5188	7418	2552	2568	6402	6402					0.10347910999416854
FFKRNINRI	9	Unmodified	_FFKRNINRI_					0	0	0		ENST00000577961.5_1_18:723830-723905:-|nuORF	ENST00000577961.5_1_18:723830-723905:-|nuORF	ENST00000577961.5_1_18:723830-723905:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3578979372978	2	604.356557	1206.69856	3.1699	0.0019157	-0.99519	-0.00060145	2.1747	0.0013143	604.3561534507077	85.185	0.9964	86.782	86.401	87.397	1.5962					136	40	5	0	0	0	0.84963	1	35775	35775		0.6015	0.076735	1	92723000			5189	7418	2552	2568	6403	6403					0.10347910999416854
FFLGSFISI	9	Unmodified	_FFLGSFISI_					0	0	0			REV__MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|30|2|sense	REV__MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|30|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1030.566699206829	1	1030.5608	1029.55352	3.9626	0.0040837	-1.0732	-0.001106	2.8894	0.0029777	1030.5597849487447	91.232	0.7181	92.598	92.342	93.06	1.366					45	22	3	0	0	0	0.1735	1	38365	38365		36.044	1.8569	1	4652400	+		5190	14355	2553	2569	6404	6404					0.03992430079733822
FFLKWIRI	8	Unmodified	_FFLKWIRI_					0	0	0			REV__ENST00000466390.5_1_1:35545015-35561430:+|nuORF	REV__ENST00000466390.5_1_1:35545015-35561430:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8473388552666	2	561.844762	1121.67497	2.7179	0.001527	1.5414	0.00086605	4.2593	0.0023931	561.8457624457902	79.923	0.52508	81.174	80.925	81.45	1.2512					32	16	3	0	0	0	0.88958	1	33548	33548		2.8892	0.58649	1	1387800	+		5191	13239	2554	2570	6405	6405					0.11900097232864937
FFLLAELLSAT	11	Unmodified	_FFLLAELLSAT_					0	0	0		SNX1|p.D398Afs*8|1|0.33|ENSG00000028528|chr15:64131864-64131864|A/-|frameshift_variant	SNX1|p.D398Afs*8|1|0.33|ENSG00000028528|chr15:64131864-64131864|A/-|frameshift_variant	SNX1|p.D398Afs*8|1|0.33|ENSG00000028528|chr15:64131864-64131864|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	408.9001953005791	3	408.900668	1223.68018	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.41	1	111.41	110.91	111.91	0								0	0	0	0.63775	1	48186	48186		1.3296	0	1				5192	15967	2555	2571	6406	6406					0.07728311514188135
FFLSDPSSF	9	Unmodified	_FFLSDPSSF_					0	0	0			REV__ENST00000589219.1_1_17:40925493-40926767:+|nuORF	REV__ENST00000589219.1_1_17:40925493-40926767:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7512084841728	2	523.745108	1045.47566	0.46924	0.00024576	4.1522	0.0021747	4.6214	0.0024204	523.7466222933414	50.63	0.30302	52.605	52.454	52.757	1.9753					22	9	3	0	0	0	0.22519	1	21181	21181		30.225	1.738	1	3726200	+		5193	14053	2556	2572	6407	6407					-0.045256275763449594
FFLVVGRIML	10	Unmodified	_FFLVVGRIML_					0	0	0			REV__ENSG00000125629|ENST00000245787|INSIG2	REV__ENSG00000125629|ENST00000245787|INSIG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8577148318291	2	597.857012	1193.69947	1.9121	0.0011431	-0.71636	-0.00042828	1.1957	0.00071486	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.89646	1	32569	32569		1.8442	0.36234	1	11246000	+		5194	9671	2557	2573	6408	6408					0.11036989324111346
FFLYLCQL	8	Unmodified	_FFLYLCQL_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.2727538943291	2	523.772614	1045.53067	-0.20187	-0.00010573	3.7595	0.0019691	3.5576	0.0018634	523.774792740125	50.892	0.1542	52.867	52.788	52.942	1.9753					6	4	2	0	0	0	2.3239	1	21333	21333		15.768	2.2603	1	561080	+		5195	9738	2558	2574	6409	6409					0.009730876905905461
FFPSSSFTST	10	Unmodified	_FFPSSSFTST_					0	0	0			REV__ENST00000530501.1_1_11:75672590-75694706:+|nuORF	REV__ENST00000530501.1_1_11:75672590-75694706:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2523071169853	2	554.253297	1106.49204	2.0738	0.0011494	-4.4826	-0.0024845	-2.4087	-0.001335	554.2504655851955	84.145	0.33775	85.783	85.623	85.96	1.6379					17	10	2	0	0	0	0.82019	1	35304	35304		10.074	2.1638	1	1780300	+		5196	13702	2559	2575	6410	6410					-0.05694546410222756
FFQCLEML	8	Unmodified	_FFQCLEML_					0	0	0			REV__nc|ENSG00000132297|C9JL84-2|HHLA1	REV__nc|ENSG00000132297|C9JL84-2|HHLA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	344.1644470095634	3	344.16273	1029.46636	0.74269	0.00025561	2.2005	0.00075735	2.9432	0.001013	344.1643366756575	84.681	0.43665	85.84	85.589	86.026	1.159					36	13	4	0	0	0	0.88163	1	35524	35524		5.7319	0	1	4911000	+		5197	9843	2560	2576	6411	6411					-0.0471943545785507
FFQSYAALV	9	Unmodified	_FFQSYAALV_					0	0	0			REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2750732302666	2	523.271293	1044.52803	2.1798	0.0011406	0.52212	0.00027321	2.7019	0.0014138	523.272897159339	51.724	1.7512	51.724	51.354	53.106	0					109	55	4	0	0	0	0.49082	1	21706	21706		15.847	1.0089	1	1257200	+		5198	9419	2561	2577	6412	6412					0.007549555572722966
FFQSYAALV	9	Unmodified	_FFQSYAALV_					0	0	0			REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	REV__nc|ENSG00000114853|Q9UFB7-2|ZBTB47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2714111208916	2	523.271293	1044.52803	0.86534	0.00045281	2.6504	0.0013869	3.5157	0.0018397	523.2720773703608	52.747	0.63475	54.145	54.055	54.69	1.398					35	19	2	0	0	0	0.30098	1	22166	22166		25.399	8.2864	1	1508900	+		5199	9419	2561	2577	6413	6413					0.007549555572722966
FFSERKYF	8	Unmodified	_FFSERKYF_					0	0	0		ENST00000438259.6_1_3:42544112-42573011:+|nuORF;nc|ENSG00000114812|P32241-4|VIPR1;nc|ENSG00000114812|P32241-5|VIPR1;ENSG00000114812|ENST00000325123|VIPR1;nc|ENSG00000114812|P32241-2|VIPR1	ENST00000438259.6_1_3:42544112-42573011:+|nuORF	ENST00000438259.6_1_3:42544112-42573011:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.2827026247978	2	562.282192	1122.54983	1.8751	0.0010543	-0.29553	-0.00016617	1.5796	0.00088817	562.2823610630473	58.894	0.30284	60.314	60.133	60.436	1.4196					18	9	2	0	0	0	0.77833	1	24692	24692		23.148	0	1	1947400			5200	1883	2562	2578	6414	6414					-0.0065423969413132
FFTTIFSW	8	Unmodified	_FFTTIFSW_					0	0	0			REV__ENSG00000122557|ENST00000311350|HERPUD2	REV__ENSG00000122557|ENST00000311350|HERPUD2	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.1769897341728	3	350.176133	1047.50657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.034	1	17.073	16.573	17.573	1.0392								0	0	0	1.0178	1	6654	6654		1.6526	0.17072	1		+		5201	9610	2563	2579	6415	6415					-0.015284294714092539
FFTVPFLR	8	Unmodified	_FFTVPFLR_					0	0	0		UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1;ENSG00000117143|ENST00000367925|UAP1	UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant	UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7924682497978	2	513.792195	1025.56984	1.2837	0.00065957	-1.531	-0.00078661	-0.24726	-0.00012704	513.7914319026727	28.342	0.30558	29.621	29.454	29.76	1.2789					16	9	2	0	0	0	0.89124	1	11866	11866		2.8892	0	1	874680			5202	1999	2564	2580	6416	6416					0.05807556036438655
FFTVPFLR	8	Unmodified	_FFTVPFLR_					0	0	0		UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant;nc|ENSG00000117143|Q16222-2|UAP1;nc|ENSG00000117143|Q16222-3|UAP1;ENSG00000117143|ENST00000367925|UAP1	UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant	UAP1|p.D340V|1|0.05|ENSG00000117143|chr1:162587659-162587659|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7917968630791	2	513.792195	1025.56984	1.058	0.00054361	-1.476	-0.00075837	-0.41799	-0.00021476	513.7912575399072	27.719	0.2799	29.494	29.385	29.665	1.7754					19	8	3	0	0	0	0.89124	1	11607	11607		2.8892	0	1	1110200			5203	1999	2564	2580	6417	6417					0.05807556036438655
FFVAPFPEVF	10	Unmodified	_FFVAPFPEVF_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3115112185478	2	600.310418	1198.60628	1.7552	0.0010536	0.93773	0.00056293	2.6929	0.0016166	600.3109967681625	97.768	0.12509	97.768	97.721	97.846	0					5	3	2	0	0	0	0.062633	1	40881	40881		97.075	71.675	1	3094400		+	5204	335	2565	2581	6418	6418					0.014923881425147556
FFVEPDFTVKR	11	Unmodified	_FFVEPDFTVKR_					0	0	0			REV__nc|ENSG00000198689|Q92581-3|SLC9A6	REV__nc|ENSG00000198689|Q92581-3|SLC9A6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	692.8693725466728	2	692.86662	1383.71869	2.4134	0.0016722	1.7412	0.0012064	4.1546	0.0028786	692.8680176434768	82.882	1.2611	82.882	82.585	83.846	0					129	40	6	0	0	0	0.50855	1	34597	34597		23.79	4.4278	1	49312000	+		5205	8680	2566	2582	6419	6419					0.04217617148674435
FFVLKVSII	9	Unmodified	_FFVLKVSII_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|26|1|sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|26|1|sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|26|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3423950076103	2	533.338978	1064.6634	2.9772	0.0015879	1.893	0.0010096	4.8702	0.0025975	533.3400474285888	82.672	0.6506	84.342	84.017	84.668	1.67					65	20	5	0	0	0	0.76456	1	34645	34645		4.756	1.8668	1	86791000			5206	7600	2567	2583	6420	6420					0.13365855418919637
FFYIFYHYWK	10	Unmodified	_FFYIFYHYWK_					0	0	0		tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2491638064384	3	505.248291	1512.72304	1.5577	0.00078701	-0.85811	-0.00043356	0.69957	0.00035346	505.24711283179664	33.951	0.39996	33.951	33.76	34.16	0					28	12	3	0	0	0	0.89803	1	14213	14213		0.62683	0	1	1355500			5207	17111	2568	2584	6421	6421					-0.012808736377337482
FFYIFYHYWK	10	Unmodified	_FFYIFYHYWK_					0	0	0		tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	tr|A0A7D6ZJX3|A0A7D6ZJX3_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06795PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	505.248291	1512.72304	1.6939	0.00085584	-0.832	-0.00042036	0.86191	0.00043548	505.2472087351381	33.497	0.15468	33.794	33.73	33.885	0.29701	-0.078425	2.1957E-05	NaN	0.62683	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439290			5208	17111	2568	2584							-0.012808736377337482
FGAGGGKA	8	Unmodified	_FGAGGGKA_					0	0	0		ENSG00000101421|ENST00000217402|CHMP4B	ENSG00000101421|ENST00000217402|CHMP4B	ENSG00000101421|ENST00000217402|CHMP4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.6733276247978	2	332.674289	663.334024	-0.5063	-0.00016843	-1.0562	-0.00035138	-1.5625	-0.00051981	332.67396702426873	10.431	0.18775	11.176	11.097	11.285	0.74462					9	6	2	0	0	0	0.89178	1	4343	4343		0.69038	0	1	514890			5209	1348	2569	2585	6422	6422					-0.011109560881550351
FGAGGGKA	8	Unmodified	_FGAGGGKA_					0	0	0		ENSG00000101421|ENST00000217402|CHMP4B	ENSG00000101421|ENST00000217402|CHMP4B	ENSG00000101421|ENST00000217402|CHMP4B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	332.674289	663.334024	-1.6349	-0.00054388	-0.43102	-0.00014339	-2.0659	-0.00068727	332.67397100766397	10.54	0.12447	11.209	11.154	11.278	0.66934	0.016709	0.00016295	NaN	0.69038	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328250			5210	1348	2569	2585							-0.011109560881550351
FGAVAPTIV	9	Unmodified	_FGAVAPTIV_					0	0	0		tr|A0A7D7A491|A0A7D7A491_9CLOTFADbindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02105PE=4SV=1	tr|A0A7D7A491|A0A7D7A491_9CLOTFADbindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02105PE=4SV=1	tr|A0A7D7A491|A0A7D7A491_9CLOTFADbindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	874.5060302615166	1	874.503281	873.496004	3.3042	0.0028895	0.79996	0.00069957	4.1041	0.0035891	874.5039276140083	82.209	0.50442	83.879	83.639	84.144	1.67					47	15	4	0	0	0	0.10722	1	34413	34413		46.921	2.5139	1	37547000			5211	17283	2570	2586	6423	6423					0.05419587874143872
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	411.2043945193291	3	411.203588	1230.58893	-0.51216	-0.0002106	2.9459	0.0012114	2.4338	0.0010008	411.2044753177793	17.312	0.27855	17.312	17.192	17.471	0					13	8	2	0	0	0	0.98765	1	7202	7202		2.084	0.49169	1	603770	+		5212	12201	2571	2587	6424	6424					-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	411.2053100466728	3	411.203588	1230.58893	0.55588	0.00022858	2.4925	0.0010249	3.0484	0.0012535	411.20446456808696	15.94	0.15472	16.071	15.963	16.118	0.13022					8	4	2	0	0	0	0.98765	1	6610	6610		2.084	0.17759	1	401550	+		5213	12201	2571	2587	6425	6425					-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	411.203588	1230.58893	-0.57276	-0.00023552	3.7374	0.0015368	3.1646	0.0013013	411.20513342217697	15.986	0.18504	15.986	15.902	16.087	0	-0.11799	0.0016502	NaN	2.084	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565700	+		5214	12201	2571	2587							-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	411.203588	1230.58893	0.55588	0.00022858	2.4925	0.0010249	3.0484	0.0012535	411.20446456808696	15.94	0.15472	16.071	15.963	16.118	0.13022	-0.033185	0.00011455	NaN	2.084	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	401550	+		5215	12201	2571	2587							-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	411.203588	1230.58893	0.616	0.0002533	0.52366	0.00021533	1.1397	0.00046864	411.2038214572845	17.05	0.1855	17.201	17.092	17.277	0.15093	-0.040777	-0.0026684	NaN	2.084	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387060	+		5216	12201	2571	2587							-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	411.203588	1230.58893	-0.058897	-2.4219E-05	2.0548	0.00084493	1.9959	0.00082071	411.20440726693147	15.358	0.12356	16.184	16.107	16.231	0.82643	0.080383	-0.00042545	NaN	2.084	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379540	+		5217	12201	2571	2587							-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	411.203588	1230.58893	0.078442	3.2256E-05	3.4725	0.0014279	3.5509	0.0014602	411.2054661871658	16.387	0.079802	17.214	17.148	17.228	0.82643	-0.028641	0.00096932	NaN	2.084	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310350	+		5218	12201	2571	2587							-0.017135987264737196
FGCPMPTIHTK	11	Unmodified	_FGCPMPTIHTK_					0	0	0			REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	REV__ENST00000262942.9_2_7:98963586-98963685:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	411.203588	1230.58893	0.14979	6.1596E-05	1.6425	0.00067541	1.7923	0.00073701	411.2044060302473	15.278	0.11726	16.175	16.105	16.222	0.89664	0.070795	-0.000934	NaN	2.084	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227450	+		5219	12201	2571	2587							-0.017135987264737196
FGEVRPYFYL	10	Unmodified	_FGEVRPYFYL_					0	0	0		nc|ENSG00000104228|Q9UPQ4-2|TRIM35;ENSG00000104228|ENST00000305364|TRIM35	nc|ENSG00000104228|Q9UPQ4-2|TRIM35	nc|ENSG00000104228|Q9UPQ4-2|TRIM35	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1222	1	4.2242	3.7242	4.7242	0.10199								0	0	0	0.66254	1	1702	1702		0.15932	0	1				5220	1454	2572	2588	6426	6426					0.011222740571838585
FGFGQVIIV	9	Unmodified	_FGFGQVIIV_					0	0	0		ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2843200564384	2	490.284203	978.553853	2.701	0.0013242	-2.6316	-0.0012902	0.069363	3.4008E-05	490.2828985889908	85.466	0.40596	86.592	86.386	86.792	1.1265					40	16	3	0	0	0	0.04206	3	35846	35846;35908;35963		74.396	30.991	1	63365000			5221	4156	2573	2589	6427;6428;6429	6427					0.06371849799563734
FGFGQVIIV	9	Unmodified	_FGFGQVIIV_					0	0	0		ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	979.5633422732353	1	979.56113	978.553853	3.0782	0.0030153	-1.5091	-0.0014783	1.5691	0.001537	979.5598592025572	85.466	0.40596	86.592	86.386	86.792	1.1265					35	16	3	0	0	0	0.061246	2	35939	35871;35939		63.563	19.156	1	59800000			5222	4156	2573	2589	6430;6431	6431					0.06371849799563734
FGFGQVIIV	9	Unmodified	_FGFGQVIIV_					0	0	0		ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2856628298759	2	490.284203	978.553853	2.9745	0.0014584	-3.0774	-0.0015088	-0.10289	-5.0448E-05	490.2825626584262	84.956	0.43867	86.553	86.311	86.75	1.5962					42	16	3	0	0	0	0.052478	3	35584	35584;35633;35702		67.035	20.114	1	73212000			5223	4156	2573	2589	6432;6433;6434	6432					0.06371849799563734
FGFGQVIIV	9	Unmodified	_FGFGQVIIV_					0	0	0		ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	ENSG00000170634|ENST00000607452|ACYP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	979.5620605349541	1	979.56113	978.553853	2.9341	0.0028741	-2.0117	-0.0019706	0.92241	0.00090355	979.5597049412594	85	0.51571	86.596	86.28	86.796	1.5962					43	19	3	0	0	0	0.061246	3	35671	35621;35671;35725		63.563	17.531	1	59352000			5224	4156	2573	2589	6435;6436;6437	6436					0.06371849799563734
FGFHKPKMY	9	Unmodified	_FGFHKPKMY_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1530944705009	3	385.532034	1153.57427	0.35787	0.00013797	-0.86317	-0.00033278	-0.5053	-0.00019481	385.532034119009	21.417	2.3833	22.594	22.327	24.711	1.177					208	77	4	0	0	0	0.11891	1	9148	9148		2.9952	0.26005	1	6732000			5225	2866	2574	2590	6438	6438					0.003626971877338292
FGFHKPKMY	9	Unmodified	_FGFHKPKMY_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7955810427666	2	577.794412	1153.57427	0.44411	0.0002566	-0.1764	-0.00010192	0.26771	0.00015468	577.795415186282	21.122	0.33474	22.697	22.437	22.772	1.5748					18	10	2	0	0	0	0.37357	1	8810	8810		21.747	14.457	1	353330			5226	2866	2574	2590	6439	6439					0.003626971877338292
FGFHKPKMY	9	Unmodified	_FGFHKPKMY_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1530029177666	3	385.532034	1153.57427	0.24024	9.2621E-05	-1.0339	-0.00039861	-0.79368	-0.00030599	385.5319284064322	20.983	2.3149	22.558	22.263	24.578	1.5748					192	76	4	0	0	0	0.11891	1	8683	8683		0.26902	0.26902	1	5795400			5227	2866	2574	2590	6440	6440					0.003626971877338292
FGFHKPKMY	9	Unmodified	_FGFHKPKMY_					0	0	0		ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	ENSG00000139146|ENST00000337682|SINHCAF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	577.794412	1153.57427	0.91684	0.00052975	-0.9529	-0.00055058	-0.036062	-2.0836E-05	577.7949330024876	21.453	0.4539	22.63	22.476	22.93	1.177	-0.033513	-0.0004993	NaN	21.747	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251650			5228	2866	2574	2590							0.003626971877338292
FGFLFVLYI	9	Unmodified	_FGFLFVLYI_					0	0	0			REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8173705935478	2	559.817879	1117.6212	2.135	0.0011952	-1.5519	-0.00086877	0.58316	0.00032646	559.8159443837069	71.974	1.0509	73.315	73.061	74.112	1.3415					112	33	5	0	0	0	0.16975	1	30317	30317		36.466	8.2929	1	21044000	+		5229	15926	2575	2591	6441	6441					0.06709880010498637
FGFLFVLYI	9	Unmodified	_FGFLFVLYI_					0	0	0			REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8170654177666	2	559.817879	1117.6212	1.9214	0.0010756	-2.4587	-0.0013764	-0.53729	-0.00030078	559.8156802233982	71.51	0.83884	73.334	73.065	73.904	1.824					95	26	5	0	0	0	0.16975	2	30127	30127;30181		36.466	9.5825	1	21481000	+		5230	15926	2575	2591	6442;6443	6442					0.06709880010498637
FGGAAFHN	8	Unmodified	_FGGAAFHN_					0	0	0			REV__nc|ENSG00000085276|Q03112-8|MECOM	REV__nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.6920959353447	2	410.69047	819.366387	2.0035	0.00082281	-0.11542	-4.7403E-05	1.8881	0.0007754	410.6901964480485	67.075	0.55733	67.398	67.094	67.651	0.32269					47	18	3	0	0	0	0.89198	1	28001	28001		0	0	1	26729000	+		5231	8848	2576	2592	6444	6444					-0.050521686851539016
FGGIRIPIILA	11	Unmodified	_FGGIRIPIILA_					0	0	0		nc|ENSG00000158865|Q8WWX8-6|SLC5A11;nc|ENSG00000158865|Q8WWX8-3|SLC5A11;ENSG00000158865|ENST00000424767|SLC5A11;nc|ENSG00000158865|Q8WWX8-4|SLC5A11	nc|ENSG00000158865|Q8WWX8-6|SLC5A11	nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3746215701103	2	585.373884	1168.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.508	1	17.406	16.906	17.906	0.89794								0	0	0	0.63775	1	6865	6865		1.4819	1.0236	1				5232	3511	2577	2593	6445	6445					0.15559734087514698
FGIKKRKLK	9	Unmodified	_FGIKKRKLK_					0	0	0		tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	373.2570678591728	3	373.257121	1116.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.23	1	106.23	105.73	106.73	0								0	0	0	0.42693	1	45282	45282		0.26902	0.26902	1				5233	16690	2578	2594	6446	6446					0.19582860044260997
FGIKKRKLK	9	Unmodified	_FGIKKRKLK_					0	0	0		tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	tr|A0A553SUF9|A0A553SUF9_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06955PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	373.2585937380791	3	373.257121	1116.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.2	1	106.25	105.75	106.75	0.05455								0	0	0	0.42693	1	45197	45197		0.26902	0.26902	1				5234	16690	2578	2594	6447	6447					0.19582860044260997
FGIPFLLRI	9	Unmodified	_FGIPFLLRI_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3409911990166	2	538.33677	1074.65899	4.3317	0.0023319	0.033389	1.7975E-05	4.3651	0.0023499	538.3374689142431	93.155	0.39171	94.027	93.769	94.161	0.87176					21	11	3	0	0	0	0.10294	1	39174	39174		48.346	23.672	1	724690			5235	4829	2579	2595	6448	6448					0.12464390995978647
FGIPFLLRI	9	Unmodified	_FGIPFLLRI_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3420287966728	2	538.33677	1074.65899	3.3947	0.0018275	1.0902	0.0005869	4.4849	0.0024144	538.3374745173913	92.592	0.29144	93.919	93.732	94.024	1.3269					15	8	2	0	0	0	0.12174	2	38988	38939;38988		42.095	17.909	1	1090800			5236	4829	2579	2595	6449;6450	6450					0.12464390995978647
FGITPKAGRR	10	Unmodified	_FGITPKAGRR_					0	0	0			REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2218505740166	3	368.220847	1101.64071	-0.26472	-9.7475E-05	2.0717	0.00076283	1.807	0.00066536	368.2218458565627	51.6	0.94752	52.997	52.289	53.237	1.3966					51	31	2	0	0	0	0.80011	1	21609	21609		7.4771	0.43998	1	3814100	+		5237	13972	2580	2596	6451	6451					0.09395649073962886
FGITPKAGRR	10	Unmodified	_FGITPKAGRR_					0	0	0			REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2225829958916	3	368.220847	1101.64071	-0.26072	-9.6002E-05	1.6767	0.00061738	1.4159	0.00052138	368.2215331747009	50.84	0.86854	52.816	52.365	53.233	1.9753					48	30	3	0	0	0	0.80011	1	21297	21297		7.4771	0.37534	1	2082700	+		5238	13972	2580	2596	6452	6452					0.09395649073962886
FGITPKAGRR	10	Unmodified	_FGITPKAGRR_					0	0	0			REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	368.220847	1101.64071	-0.26472	-9.7475E-05	2.0717	0.00076283	1.807	0.00066536	368.2218458565627	51.6	0.94752	52.997	52.289	53.237	1.3966	0.090444	0.00019754	NaN	7.4771	51	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3814100	+		5239	13972	2580	2596							0.09395649073962886
FGITPKAGRR	10	Unmodified	_FGITPKAGRR_					0	0	0			REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	REV__ENST00000573070.5_1_17:7297840-7298119:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	368.220847	1101.64071	-0.26072	-9.6002E-05	1.6767	0.00061738	1.4159	0.00052138	368.2215331747009	50.84	0.86854	52.816	52.365	53.233	1.9753	-0.090444	-0.00023882	NaN	7.4771	48	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2082700	+		5240	13972	2580	2596							0.09395649073962886
FGKFKSYFH	9	Unmodified	_FGKFKSYFH_					0	0	0			REV__ENST00000555139.1_1_14:74960477-74961199:+|nuORF	REV__ENST00000555139.1_1_14:74960477-74961199:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7964355349541	2	580.798009	1159.58147	2.5152	0.0014608	-3.0237	-0.0017562	-0.50847	-0.00029532	580.7960676109942	44.987	0.28468	46.353	46.18	46.464	1.3653					19	8	3	0	0	0	0.75267	1	18880	18880		5.2307	0	1	1311600	+		5241	13864	2581	2597	6453	6453					0.008057530597852747
FGLDLRST	8	Unmodified	_FGLDLRST_					0	0	0			REV__nc|ENSG00000198625|O15151-5|MDM4	REV__nc|ENSG00000198625|O15151-5|MDM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	908.4821655154228	1	908.483608	907.476331	1.125	0.001022	-3.5418	-0.0032177	-2.4168	-0.0021957	908.4810024145984	100.68	0.12214	100.68	100.6	100.72	0					7	3	3	0	0	0	0.84871	1	42150	42150		16.942	1.0951	1	7612700	+		5242	11719	2582	2598	6454	6454					0.018892118633857535
FGLDLRST	8	Unmodified	_FGLDLRST_					0	0	0			REV__nc|ENSG00000198625|O15151-5|MDM4	REV__nc|ENSG00000198625|O15151-5|MDM4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	908.483608	907.476331	1.125	0.001022	-3.5418	-0.0032177	-2.4168	-0.0021957	908.4810024145984	100.68	0.12214	100.68	100.6	100.72	0	-0.030053	0.0004203	NaN	16.942	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7612700	+		5243	11719	2582	2598							0.018892118633857535
FGLDLRST	8	Unmodified	_FGLDLRST_					0	0	0			REV__nc|ENSG00000198625|O15151-5|MDM4	REV__nc|ENSG00000198625|O15151-5|MDM4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	908.483608	907.476331	2.8177	0.0025598	-5.8474	-0.0053123	-3.0297	-0.0027525	908.4784920951316	100.66	0.15437	100.74	100.66	100.81	0.072716	0.030053	-0.0016743	NaN	16.942	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5009400	+		5244	11719	2582	2598							0.018892118633857535
FGLGKLLQFLF	11	Unmodified	_FGLGKLLQFLF_					0	0	0			REV__ENST00000442838.2_1_8:123781530-123781986:+|nuORF	REV__ENST00000442838.2_1_8:123781530-123781986:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8841430544853	2	641.881542	1281.74853	1.7643	0.0011325	1.9579	0.0012567	3.7222	0.0023892	641.8827940815319	80.063	0.91084	80.364	79.877	80.788	0.30047					64	28	3	0	0	0	1.0357	1	33379	33379		1.4819	0.15237	1	1155100	+		5245	10753	2583	2599	6455	6455					0.1189260088467563
FGLGKLLQFLF	11	Unmodified	_FGLGKLLQFLF_					0	0	0			REV__ENST00000442838.2_1_8:123781530-123781986:+|nuORF	REV__ENST00000442838.2_1_8:123781530-123781986:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8849975466728	2	641.881542	1281.74853	1.4587	0.0009363	2.2236	0.0014273	3.6823	0.0023636	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0362	1	34169	34169		1.3295	0	1	9116700	+		5246	10753	2583	2599	6456	6456					0.1189260088467563
FGNNKLTTF	9	Unmodified	_FGNNKLTTF_					0	0	0		nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98	nc|ENSG00000110713|P52948-4|NUP98	nc|ENSG00000110713|P52948-4|NUP98	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2709228396416	2	521.271824	1040.5291	0.81689	0.00042582	-1.1628	-0.00060616	-0.34596	-0.00018034	521.2708398085597	32.494	0.25899	34.319	34.187	34.446	1.8246					14	8	2	0	0	0	0.02878	1	13614	13614		89.401	35.568	1	1278700			5247	1714	2584	2600	6457	6457					0.010451699261466274
FGNNKLTTF	9	Unmodified	_FGNNKLTTF_					0	0	0		nc|ENSG00000110713|P52948-4|NUP98;nc|ENSG00000110713|P52948-3|NUP98;nc|ENSG00000110713|P52948-6|NUP98;nc|ENSG00000110713|P52948-2|NUP98;ENSG00000110713|ENST00000324932|NUP98;nc|ENSG00000110713|P52948|NUP98	nc|ENSG00000110713|P52948-4|NUP98	nc|ENSG00000110713|P52948-4|NUP98	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	521.271824	1040.5291	0.66896	0.00034871	-1.5476	-0.00080674	-0.87869	-0.00045803	521.2704812719082	33.074	0.21511	34.352	34.198	34.413	1.2782	0.016412	-0.00021202	NaN	89.401	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1404900			5248	1714	2584	2600							0.010451699261466274
FGPGVAFR	8	Unmodified	_FGPGVAFR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7329589724541	2	425.732138	849.449723	0.55571	0.00023659	0.20949	8.9187E-05	0.76521	0.00032577	425.7320961849128	32.854	0.30206	34.132	33.949	34.251	1.2782					17	10	2	0	0	0	0.5808	2	13806	13757;13806		42.095	22.656	1	2194200		+	5249	344	2585	2601	6458;6459	6459					0.01897567762705421
FGPGVAFR	8	Unmodified	_FGPGVAFR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7325317263603	2	425.732138	849.449723	0.8619	0.00036694	0.057487	2.4474E-05	0.91939	0.00039141	425.7321454222595	32.325	0.30178	34.15	33.972	34.273	1.8246					22	9	3	0	0	0	0.5808	2	13552	13505;13552		42.095	17.421	1	1691400		+	5250	344	2585	2601	6460;6461	6461					0.01897567762705421
FGSVQVYLNF	10	Unmodified	_FGSVQVYLNF_					0	0	0		ENSG00000157315|ENST00000288025|TMED6	ENSG00000157315|ENST00000288025|TMED6	ENSG00000157315|ENST00000288025|TMED6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.3005248904228	2	587.300581	1172.58661	2.3695	0.0013916	-0.94438	-0.00055463	1.4251	0.00083698	587.3001150694888	59.169	0.35947	60.588	60.409	60.769	1.4196					25	11	3	0	0	0	0.22673	1	24772	24772		45.7	9.1934	1	2594300			5251	3468	2586	2602	6462	6462					0.007220121317459416
FGSVQVYLNF	10	Unmodified	_FGSVQVYLNF_					0	0	0		ENSG00000157315|ENST00000288025|TMED6	ENSG00000157315|ENST00000288025|TMED6	ENSG00000157315|ENST00000288025|TMED6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.3016235232353	2	587.300581	1172.58661	2.0204	0.0011866	-0.58258	-0.00034215	1.4378	0.00084442	587.3003906205143	58.62	0.38686	60.589	60.457	60.844	1.969					25	12	3	0	0	0	0.22673	1	24579	24579		45.7	7.7256	1	3391500			5252	3468	2586	2602	6463	6463					0.007220121317459416
FGTDGSNFG	9	Unmodified	_FGTDGSNFG_					0	0	0		ENST00000444886.1_1_9:128358162-128358726:+|nuORF	ENST00000444886.1_1_9:128358162-128358726:+|nuORF	ENST00000444886.1_1_9:128358162-128358726:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1286193728447	3	301.12773	900.361361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.89	1	102.08	101.58	102.58	0.19076								0	0	0	0.42693	1	42842	42842		0.26902	0	1				5253	6577	2587	2603	6464	6464					-0.09280517338424943
FGVDRAILY	9	Unmodified	_FGVDRAILY_					0	0	0		nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	nc|ENSG00000138448|P06756-3|ITGAV	nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2912475466728	2	527.290017	1052.56548	2.2099	0.0011653	-0.94883	-0.00050031	1.2611	0.00066496	527.2899280480573	47.776	0.40577	49.158	48.922	49.328	1.3825					37	12	5	0	0	0	0.087723	2	19976	19976;20013		53.404	20.618	1	12615000			5254	2831	2588	2604	6465;6466	6465					0.04130046822888289
FGVDRAILY	9	Unmodified	_FGVDRAILY_					0	0	0		nc|ENSG00000138448|P06756-3|ITGAV;nc|ENSG00000138448|P06756-2|ITGAV;ENSG00000138448|ENST00000261023|ITGAV	nc|ENSG00000138448|P06756-3|ITGAV	nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2906982302666	2	527.290017	1052.56548	2.6789	0.0014126	-0.9776	-0.00051548	1.7013	0.00089709	527.2898289771606	47.293	0.43299	49.269	49.063	49.496	1.976					36	13	4	0	0	0	0.066197	2	19778	19778;19820		61.602	21.652	1	11903000			5255	2831	2588	2604	6467;6468	6467					0.04130046822888289
FGYPDPTYL	9	Unmodified	_FGYPDPTYL_					0	0	0		ENSG00000178498|ENST00000337737|DTX3;nc|ENSG00000178498|Q8N9I9-2|DTX3	ENSG00000178498|ENST00000337737|DTX3	ENSG00000178498|ENST00000337737|DTX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1072.503344714642	1	1072.49859	1071.49131	3.6103	0.0038721	-0.99445	-0.0010665	2.6159	0.0028055	1072.4976844179398	60.687	0.18338	62.652	62.546	62.729	1.9653					10	5	2	0	0	0	0.083604	1	25462	25462		54.774	26.287	1	659770			5256	4486	2589	2605	6469	6469					-0.04157341059294595
FGYPDPTYL	9	Unmodified	_FGYPDPTYL_					0	0	0		ENSG00000178498|ENST00000337737|DTX3;nc|ENSG00000178498|Q8N9I9-2|DTX3	ENSG00000178498|ENST00000337737|DTX3	ENSG00000178498|ENST00000337737|DTX3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1072.49859	1071.49131	3.4095	0.0036566	-1.5007	-0.0016095	1.9088	0.0020472	1072.4975829057876	61.191	0.24318	62.611	62.473	62.716	1.4196	-0.020702	-0.00041055	NaN	54.774	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1142300			5257	4486	2589	2605							-0.04157341059294595
FHCFCRYDW	9	Unmodified	_FHCFCRYDW_					0	0	0			REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0558654665947	4	319.881119	1275.49537	-2.7332	-0.0008743	-0.76932	-0.00024609	-3.5025	-0.0011204	319.8801702260462	28.536	0.15477	28.536	28.411	28.566	0					6	4	2	0	0	0	0.11954	1	11927	11927		0	0	1	75811	+		5258	14476	2590	2606	6470	6470					-0.1313589810886242
FHDDDMDFGD	10	Unmodified	_FHDDDMDFGD_					0	0	0		TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant;nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2101928591728	2	607.20876	1212.40297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.872	1	24.086	23.586	24.586	1.2145								0	0	0	0.66237	1	9559	9559		0.45834	0.057624	1				5259	1305	2591	2607	6471	6471					-0.19473749432086152
FHDELEDFY	9	Unmodified	_FHDELEDFY_					0	0	0		ENST00000445872.2_1_9:99489345-99489522:+|nuORF;ENST00000475010.5_1_7:140154319-140155077:-|nuORF;nc|ENSG00000133606|Q9UHC7-2|MKRN1;ENSG00000133606|ENST00000255977|MKRN1	ENST00000445872.2_1_9:99489345-99489522:+|nuORF	ENST00000445872.2_1_9:99489345-99489522:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5075256228447	3	405.504866	1213.49277	2.5952	0.0010524	3.0209	0.001225	5.6161	0.0022774	405.5061241632871	62.826	0.42619	64.24	64.045	64.471	1.4134					34	13	3	0	0	0	0.52273	1	26321	26321		14.405	3.6059	1	7816500			5260	2575	2592	2608	6472	6472					-0.1054375176117901
FHELKEPFLH	10	Unmodified	_FHELKEPFLH_					0	0	0			REV__nc|ENSG00000136114|Q9NS62-2|THSD1	REV__nc|ENSG00000136114|Q9NS62-2|THSD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9000427126884	3	432.896029	1295.66626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.345	1	42.67	42.17	43.17	1.3254								0	0	0	0.64065	1	17336	17336		19.626	3.3514	1		+		5261	9974	2593	2609	6473	6473					0.030250788057401223
FHFRVYFGHWV	11	Unmodified	_FHFRVYFGHWV_					0	0	0		ENST00000598164.2_1_19:40172096-40174784:+|nuORF;ENST00000412609.5_1_19:40170059-40174276:+|nuORF	ENST00000598164.2_1_19:40172096-40174784:+|nuORF	ENST00000598164.2_1_19:40172096-40174784:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	498.3113281130791	3	498.919168	1493.73567	2.2406	0.0011179	2.4502	0.0012225	4.6908	0.0023403	498.92051103277106	89.099	0.66841	89.099	88.637	89.306	0					31	20	2	0	0	0	0.14606	1	37203	37203		0.50596	0.34663	1	606680			5262	6389	2594	2610	6474	6474					0.008555825451821875
FHHALPLIV	9	Unmodified	_FHHALPLIV_					0	0	0			REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	REV__nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8135864138603	2	523.810919	1045.60729	3.2481	0.0017014	3.6448	0.0019092	6.8928	0.0036105	523.8129882306625	95.367	0.24844	95.769	95.681	95.929	0.40208					14	8	2	0	0	0	0.39097	1	40123	40123		20.871	0.41758	1	1454900	+		5263	10198	2595	2611	6475	6475					0.08630647302061334
FHHNGTPQK	9	Unmodified	_FHHNGTPQK_					0	0	0			REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1898681521416	2	533.264865	1064.51518	0.44767	0.00023873	-2.1855	-0.0011654	-1.7378	-0.00092672	533.2633285126124	14.674	0.088995	15.571	15.531	15.62	0.89664					4	2	2	0	0	0	0.11645	1	6086	6086		4.756	0.81161	1	215180	+		5264	12537	2596	2612	6476	6476					-0.0145006278225992
FHHNGTPQK	9	Unmodified	_FHHNGTPQK_					0	0	0			REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	533.264865	1064.51518	0.60911	0.00032481	-0.26376	-0.00014065	0.34535	0.00018416	533.2649945126647	15.295	0.12523	15.295	15.217	15.342	0	-0.12408	-0.00054422	NaN	4.756	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	689170	+		5265	12537	2596	2612							-0.0145006278225992
FHHNGTPQK	9	Unmodified	_FHHNGTPQK_					0	0	0			REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	REV__ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	533.264865	1064.51518	0.42457	0.00022641	0.95432	0.0005089	1.3789	0.00073531	533.2654703927593	15.262	0.15805	15.393	15.304	15.462	0.13022	-0.026912	0.00075489	NaN	4.756	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1014500	+		5266	12537	2596	2612							-0.0145006278225992
FHINLILHGK	10	Unmodified	_FHINLILHGK_					0	0	0			REV__chr3:54634565-54637674|291|36.16|0.21|7.42|-|0|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|16	REV__chr3:54634565-54637674|291|36.16|0.21|7.42|-|0|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|16	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	397.1898986697197	3	397.904747	1190.69241	1.8772	0.00074693	-1.0163	-0.00040439	0.86086	0.00034254	397.90485024186495	46.661	1.176	48.632	48.315	49.491	1.9703					46	37	2	0	0	0	0.12547	1	19796	19796		3.8763	1.2451	1	1297400	+		5267	8225	2597	2613	6477	6477					0.10469392767868158
FHKLKKGV	8	Unmodified	_FHKLKKGV_					0	0	0			REV__ENST00000302014.10_1_5:140012494-140012747:-|nuORF	REV__ENST00000302014.10_1_5:140012494-140012747:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	320.0555908083916	3	319.539517	955.596721	0.29401	9.3949E-05	2.0296	0.00064854	2.3236	0.00074249	319.54008510118933	27.288	1.1964	27.56	26.544	27.741	0.27119					75	38	3	0	0	0	2.3239	1	11253	11253		0.45834	0	1	793370	+		5268	12315	2598	2614	6478	6478					0.11714664647661266
FHKLKKGV	8	Unmodified	_FHKLKKGV_					0	0	0			REV__ENST00000302014.10_1_5:140012494-140012747:-|nuORF	REV__ENST00000302014.10_1_5:140012494-140012747:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.0558044314384	3	319.539517	955.596721	-0.012701	-4.0585E-06	1.6351	0.00052249	1.6224	0.00051843	319.5400304914647	26.077	0.65576	27.336	27.017	27.673	1.2594					48	20	3	0	0	0	2.3239	1	11058	11058		0.45834	0	1	913320	+		5269	12315	2598	2614	6479	6479					0.11714664647661266
FHKLLLQLLA	10	Unmodified	_FHKLLLQLLA_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0455810427666	3	399.256898	1194.74886	-0.44589	-0.00017802	0.33554	0.00013397	-0.11035	-4.4059E-05	399.2558656402515	26.401	0.44819	26.401	26.087	26.535	0					31	14	3	0	0	0	0.12561	1	10980	10980		0.15932	0	1	1989900			5270	7597	2599	2615	6480	6480					0.159280206045878
FHKLRRNSLNL	11	Unmodified	_FHKLRRNSLNL_					0	0	0			REV__ENST00000485583.1_1_7:100179936-100183723:-|nuORF	REV__ENST00000485583.1_1_7:100179936-100183723:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4125854372978	2	699.409852	1396.80515	2.6858	0.0018785	-1.3144	-0.00091932	1.3714	0.00095915	699.4090452404861	85.115	1.1414	85.115	84.461	85.603	0					72	35	3	0	0	0	1.0388	1	35360	35360		0.35063	0.081612	1	1363000	+		5271	8779	2600	2616	6481	6481					0.12262041493931974
FHKLRRNSLNL	11	Unmodified	_FHKLRRNSLNL_					0	0	0			REV__ENST00000485583.1_1_7:100179936-100183723:-|nuORF	REV__ENST00000485583.1_1_7:100179936-100183723:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	699.409852	1396.80515	1.3184	0.00092208	-0.93677	-0.00065519	0.3816	0.0002669	699.4084608631726	84.259	0.5033	85.418	85.279	85.782	1.159	0.15115	0.00038466	NaN	0.35063	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1241300	+		5272	8779	2600	2616							0.12262041493931974
FHLDLAYAPPF	11	Unmodified	_FHLDLAYAPPF_					0	0	0		tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1;tr|A0A7D6VPR3|A0A7D6VPR3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12570PE=3SV=1	tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1	tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.553	1	17.856	17.356	18.356	1.3023								0	0	0	0.63775	1	6874	6874		1.4551	0.12547	1				5273	16414	2601	2617	6482	6482					0.011222740571838585
FHLDLAYAPPF	11	Unmodified	_FHLDLAYAPPF_					0	0	0		tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1;tr|A0A7D6VPR3|A0A7D6VPR3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12570PE=3SV=1	tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1	tr|A0A553SNE0|A0A553SNE0_NIACIDehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_24270PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889037966728	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.182	1	28.928	28.428	29.428	1.747								0	0	0	0.63775	1	11376	11376		0.50596	0	1				5274	16414	2601	2617	6483	6483					0.011222740571838585
FHPDQYKGEK	10	Unmodified	_FHPDQYKGEK_					0	0	0		ENSG00000134871|ENST00000360467|COL4A2	ENSG00000134871|ENST00000360467|COL4A2	ENSG00000134871|ENST00000360467|COL4A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	416.2284728884697	3	416.871772	1247.59349	0.4696	0.00019576	3.83	0.0015966	4.2996	0.0017924	416.87339587952647	22.23	0.39987	23.846	23.674	24.074	1.6158					23	12	3	0	0	0	0.12555	1	9220	9220		0.69767	0.24315	1	1177300			5275	2638	2602	2618	6484	6484					-0.020406749876883623
FHPEKSPSKQL	11	Unmodified	_FHPEKSPSKQL_					0	0	0			REV__ENSG00000188338|ENST00000614032|SLC38A3	REV__ENSG00000188338|ENST00000614032|SLC38A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2338439822197	3	433.234822	1296.68264	2.1731	0.00094147	-1.3027	-0.00056438	0.8704	0.00037709	433.2342050868566	42.552	2.0747	42.872	42.404	44.478	0.32058					126	67	2	0	0	0	0.95124	1	18480	18480		3.0723	0	1	2894600	+		5276	11566	2603	2619	6485	6485					0.0461615997185163
FHPQSLIVNK	10	Unmodified	_FHPQSLIVNK_					0	0	0		CDH26|p.F401L|1|0.03|ENSG00000124215|chr20:59989083-59989083|C/A|missense_variant	CDH26|p.F401L|1|0.03|ENSG00000124215|chr20:59989083-59989083|C/A|missense_variant	CDH26|p.F401L|1|0.03|ENSG00000124215|chr20:59989083-59989083|C/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	394.5596801638603	3	394.892507	1181.65569	-0.45727	-0.00018057	3.6202	0.0014296	3.1629	0.001249	394.89397672538524	112.86	0.16445	112.86	112.78	112.94	0					6	4	2	0	0	0	0.12547	1	48789	48789		1.9064	0.83491	1	641410			5277	140	2604	2620	6486	6486					0.07213096151326681
FHPWAMNG	8	Unmodified	_FHPWAMNG_					0	0	0		nc|ENSG00000148143|Q96JM2-2|ZNF462;nc|ENSG00000148143|Q96JM2-3|ZNF462;ZNF462|p.Q1930Rfs*3|1|0.04|ENSG00000148143|chr9:106929701-106929701|A/-|frameshift_variant;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	320.2072936892509	3	320.477929	958.411957	1.4671	0.00047016	2.3159	0.00074219	3.783	0.0012124	320.4791361770291	67.841	0.39959	69.711	69.549	69.949	1.87					24	12	4	0	0	0	2.3239	1	28556	28556		1.6526	1.1943	1	575330			5278	7894	2605	2621	6487	6487					-0.06891266494415049
FHPWAMNG	8	Unmodified	_FHPWAMNG_					0	0	0		nc|ENSG00000148143|Q96JM2-2|ZNF462;nc|ENSG00000148143|Q96JM2-3|ZNF462;ZNF462|p.Q1930Rfs*3|1|0.04|ENSG00000148143|chr9:106929701-106929701|A/-|frameshift_variant;ENSG00000148143|ENST00000277225|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	320.477929	958.411957	0.98431	0.00031545	4.1648	0.0013347	5.1491	0.0016502	320.479681064101	68.455	0.36449	69.833	69.583	69.948	1.3778	0.060713	0.0010123	NaN	1.6526	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	722920			5279	7894	2605	2621							-0.06891266494415049
FHQRLFEHI	9	Unmodified	_FHQRLFEHI_					0	0	0		ENST00000550495.1_1_12:44238658-44537374:+|nuORF	ENST00000550495.1_1_12:44238658-44537374:+|nuORF	ENST00000550495.1_1_12:44238658-44537374:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.5532409548759	3	409.552485	1225.63563	0.40204	0.00016466	1.7017	0.00069692	2.1037	0.00086157	409.553111278356	39.721	0.84131	39.721	39.328	40.169	0					47	26	2	0	0	0	0.5697	2	16629	16550;16629		9.3831	1.4377	1	1071100			5280	7263	2606	2622	6488;6489	6489					0.0318334521136876
FHRWLFRDN	9	Unmodified	_FHRWLFRDN_					0	0	0			REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8880187869072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.467	1	18.467	17.967	18.967	0								0	0	0	0.42693	1	7675	7675		0.26902	0	1		+		5281	12762	2607	2623	6490	6490					0.00853863442898728
FHRWLFRDN	9	Unmodified	_FHRWLFRDN_					0	0	0			REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.479	1	17.63	17.13	18.13	0.15093								0	0	0	0.42693	1	7252	7252		0.26902	0	1		+		5282	12762	2607	2623	6491	6491					0.00853863442898728
FHRWLFRDN	9	Unmodified	_FHRWLFRDN_					0	0	0			REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	REV__ENST00000380736.5_1_X:11157631-11160408:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.896	1	17.794	17.294	18.294	0.89794								0	0	0	0.42693	1	7031	7031		1.1933	0	1		+		5283	12762	2607	2623	6492	6492					0.00853863442898728
FHRYGTDETK	10	Unmodified	_FHRYGTDETK_					0	0	0			REV__nc|ENSG00000078246|O75386-3|TULP3	REV__nc|ENSG00000078246|O75386-3|TULP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3160278201103	3	418.53516	1252.58365	-0.55572	-0.00023259	1.9576	0.00081931	1.4019	0.00058672	418.5357372344245	11.706	0.30578	11.706	11.575	11.88	0					13	9	2	0	0	0	0.12547	1	4821	4821		3.8763	0.28927	1	294010	+		5284	14395	2608	2624	6493	6493					-0.03253862993051371
FHSFLSSLVF	10	Unmodified	_FHSFLSSLVF_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	593.1577636599541	2	592.310949	1182.60735	2.1912	0.0012979	-0.49224	-0.00029156	1.699	0.0010063	592.3108376359513	39.026	0.18638	40.322	40.226	40.413	1.2961					9	5	2	0	0	0	0.12539	1	16397	16397		4.3292	0	1	1069800			5285	7760	2609	2625	6494	6494					0.023346025114051372
FHSFLSSLVF	10	Unmodified	_FHSFLSSLVF_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|363|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	592.310949	1182.60735	1.1712	0.00069373	1.3649	0.00080846	2.5361	0.0015022	592.3123892809114	38.451	0.21957	40.288	40.178	40.398	1.8366	-0.01712	0.001394	NaN	4.3292	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1093800			5286	7760	2609	2625							0.023346025114051372
FHSQQESVEVL	11	Unmodified	_FHSQQESVEVL_					0	0	0		ENST00000287218.8_1_6:38120967-38121303:+|nuORF	ENST00000287218.8_1_6:38120967-38121303:+|nuORF	ENST00000287218.8_1_6:38120967-38121303:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8831970095634	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.05	1	53.373	52.873	53.873	0.32283								0	0	0	0.63775	1	22224	22224		0.50596	0	1				5287	5716	2610	2626	6495	6495					-0.013567270243584062
FHVPLFFRYQ	10	Unmodified	_FHVPLFFRYQ_					0	0	0		ENST00000568099.6_2_16:68057196-68071937:+|nuORF	ENST00000568099.6_2_16:68057196-68071937:+|nuORF	ENST00000568099.6_2_16:68057196-68071937:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9090453982353	3	451.908269	1352.70298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.568	1	13.667	13.167	14.167	0.09944								0	0	0	0.66218	1	5630	5630		0.77653	0.14971	1				5288	7369	2611	2627	6496	6496					0.04073375422308345
FHVPLFFRYQ	10	Unmodified	_FHVPLFFRYQ_					0	0	0		ENST00000568099.6_2_16:68057196-68071937:+|nuORF	ENST00000568099.6_2_16:68057196-68071937:+|nuORF	ENST00000568099.6_2_16:68057196-68071937:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9091064333916	3	451.908269	1352.70298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.952	1	13.779	13.279	14.279	0.82789								0	0	0	0.66254	1	5371	5371		0.15932	0	1				5289	7369	2611	2627	6497	6497					0.04073375422308345
FHVYQKGC	8	Unmodified	_FHVYQKGC_					0	0	0		ENSG00000115170|ENST00000434821|ACVR1	ENSG00000115170|ENST00000434821|ACVR1	ENSG00000115170|ENST00000434821|ACVR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1999084353447	3	327.825217	980.453822	-2.3129	-0.00075822	2.3889	0.00078313	0.07597	2.4905E-05	327.824474947585	33.382	0.30993	33.382	33.174	33.484	0					14	9	2	0	0	0	2.3239	1	13988	13988		1.8442	0.19162	1	1172900			5290	1900	2612	2628	6498	6498					-0.037187108058901686
FHYDWISIPL	10	Unmodified	_FHYDWISIPL_					0	0	0		ENSG00000142959|ENST00000372207|BEST4	ENSG00000142959|ENST00000372207|BEST4	ENSG00000142959|ENST00000372207|BEST4	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1421	1	4.8873	4.3873	5.3873	0.74525								0	0	0	0.66254	1	1716	1716		0.15932	0	1				5291	3011	2613	2629	6499	6499					0.011222740571838585
FIADFPGLHL	10	Unmodified	_FIADFPGLHL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3078491091728	2	565.305667	1128.59678	1.4401	0.00081408	1.5215	0.00086013	2.9616	0.0016742	565.3060269061766	77.445	0.21674	77.445	77.316	77.533	0					13	6	3	0	0	0	0.62746	1	32240	32240		21.747	10.923	1	350830			5292	1924	2614	2630	6500	6500					0.03762619857002392
FIADFPGLHL	10	Unmodified	_FIADFPGLHL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	565.305667	1128.59678	2.0079	0.0011351	0.23668	0.0001338	2.2446	0.0012689	565.3060945320063	76.945	0.25222	77.261	77.103	77.355	0.31653	-0.09187	-0.00064399	NaN	21.747	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369900			5293	1924	2614	2630							0.03762619857002392
FIASRAGVVV	10	Unmodified	_FIASRAGVVV_					0	0	0			REV__tr|A0A553SP83|A0A553SP83_NIACIPrimosomalproteinN'OS=NialliacirculansOX=1397GN=priAPE=3SV=1	REV__tr|A0A553SP83|A0A553SP83_NIACIPrimosomalproteinN'OS=NialliacirculansOX=1397GN=priAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8049194216728	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.292	1	68.292	67.792	68.792	0								0	0	0	0.65539	1	28441	28441		9.3831	0.78985	1		+		5294	15075	2615	2631	6501	6501					0.08902039576855714
FIASRAGVVV	10	Unmodified	_FIASRAGVVV_					0	0	0			REV__tr|A0A553SP83|A0A553SP83_NIACIPrimosomalproteinN'OS=NialliacirculansOX=1397GN=priAPE=3SV=1	REV__tr|A0A553SP83|A0A553SP83_NIACIPrimosomalproteinN'OS=NialliacirculansOX=1397GN=priAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8043090701103	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.457	1	67.846	67.346	68.346	1.3888								0	0	0	0.61972	1	27879	27879		20.454	0	1		+		5295	15075	2615	2631	6502	6502					0.08902039576855714
FIAVAILLTY	10	Unmodified	_FIAVAILLTY_					0	0	0			REV__tr|A0A553SKT1|A0A553SKT1_NIACIRhodanese-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_19385PE=4SV=1	REV__tr|A0A553SKT1|A0A553SKT1_NIACIRhodanese-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_19385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3441650271416	2	562.341718	1122.66888	1.2031	0.00067655	3.0003	0.0016872	4.2034	0.0023637	562.3431565799003	70.004	1.3335	70.326	69.344	70.678	0.32224					80	42	3	0	0	0	0.89646	1	29280	29280		1.8442	0.19162	1	1666400	+		5296	14964	2616	2632	6503	6503					0.11245534210706865
FIAVMMQF	8	Unmodified	_FIAVMMQF_					0	0	0		tr|A0A553STK7|A0A553STK7_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_05320PE=3SV=1	tr|A0A553STK7|A0A553STK7_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_05320PE=3SV=1	tr|A0A553STK7|A0A553STK7_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_05320PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	329.5006591677666	3	329.499453	985.476531	1.4807	0.00048789	3.6318	0.0011967	5.1125	0.0016846	329.5005625031861	83.002	0.3978	84.215	83.983	84.381	1.2125					28	12	3	0	0	0	0.8793	1	34810	34810		9.3831	0	1	2138100			5297	16654	2617	2633	6504	6504					-0.016788277326213574
FIDAFSSAII	10	Unmodified	_FIDAFSSAII_					0	0	0			REV__tr|A0A7D6VTL8|A0A7D6VTL8_9CLOT3-isopropylmalatedehydratasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=leuDPE=3SV=1	REV__tr|A0A7D6VTL8|A0A7D6VTL8_9CLOT3-isopropylmalatedehydratasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=leuDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.8361694216728	2	542.289682	1082.56481	4.7187	0.0025589	-0.68978	-0.00037406	4.0289	0.0021848	542.2886821891466	88.748	0.32118	90.194	90.017	90.338	1.4467					10	9	2	0	0	0	0.12425	1	37405	37405		19.257	2.1441	1	483040	+		5298	15492	2618	2634	6505	6505					0.026832073831883463
FIDEIDSFL	9	Unmodified	_FIDEIDSFL_					0	0	0		nc|ENSG00000138138|Q8NBU5-2|ATAD1;ENSG00000138138|ENST00000680024|ATAD1	nc|ENSG00000138138|Q8NBU5-2|ATAD1	nc|ENSG00000138138|Q8NBU5-2|ATAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7718994021416	2	549.771322	1097.52809	2.339	0.0012859	1.928	0.00106	4.2671	0.0023459	549.770540734617	78.193	0.38995	79.462	79.247	79.637	1.2693					34	12	4	0	0	0	0.19075	1	32841	32841		34.102	3.8776	1	3046700			5299	2817	2619	2635	6506	6506					-0.016770892333852316
FIDEKRLLE	9	Unmodified	_FIDEKRLLE_					0	0	0		XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;XRN1|p.G1339Efs*6|1|0.06|ENSG00000114127|chr3:142333013-142333014|-/T|frameshift_variant;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	581.8262817263603	2	581.826963	1161.63937	1.6239	0.00094484	-1.1342	-0.00065991	0.48972	0.00028493	581.8266757533763	70.858	0.28304	70.858	70.657	70.94	0					14	8	2	0	0	0	0.52273	1	29511	29511		14.405	0	1	562360			5300	1852	2620	2636	6507	6507					0.06501970194563
FIDIYVHKDFD	11	Unmodified	_FIDIYVHKDFD_					0	0	0		tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	706.3499023318291	2	706.34826	1410.68197	1.7526	0.0012379	0.29267	0.00020673	2.0453	0.0014447	706.3484602661583	71.312	0.39104	72.654	72.482	72.873	1.3415					43	12	4	0	0	0	0.19749	3	29939	29894;29939;29979		40.239	4.4687	1	13591000			5301	17331	2621	2637	6508;6509;6510	6509					-0.006946794678697188
FIDIYVHKDFD	11	Unmodified	_FIDIYVHKDFD_					0	0	0		tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	tr|A0A7D7ADW5|A0A7D7ADW5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00575PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	706.3483764529228	2	706.34826	1410.68197	0.21883	0.00015457	1.7309	0.0012226	1.9497	0.0013772	706.3495309404012	70.845	0.39124	72.683	72.503	72.894	1.8378					41	12	4	0	0	0	0.32985	1	29785	29785		29.841	3.8199	1	14051000			5302	17331	2621	2637	6511	6511					-0.006946794678697188
FIDQVVLQV	9	Unmodified	_FIDQVVLQV_					0	0	0		nc|ENSG00000155275|Q8IYL2-3|TRMT44;nc|ENSG00000155275|Q8IYL2-2|TRMT44;ENST00000532477.1_1_4:8456189-8477725:+|nuORF;ENSG00000155275|ENST00000389737|TRMT44	nc|ENSG00000155275|Q8IYL2-3|TRMT44	nc|ENSG00000155275|Q8IYL2-3|TRMT44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8068115115166	2	530.8055	1059.59645	1.3711	0.0007278	0.46711	0.00024794	1.8382	0.00097574	530.8058882480352	56.646	0.67963	58.06	57.658	58.338	1.4145					70	21	5	0	0	0	0.024001	1	23686	23686		96.111	3.4576	1	54351000			5303	3413	2622	2638	6512	6512					0.0690320013713972
FIDQVVLQV	9	Unmodified	_FIDQVVLQV_					0	0	0		nc|ENSG00000155275|Q8IYL2-3|TRMT44;nc|ENSG00000155275|Q8IYL2-2|TRMT44;ENST00000532477.1_1_4:8456189-8477725:+|nuORF;ENSG00000155275|ENST00000389737|TRMT44	nc|ENSG00000155275|Q8IYL2-3|TRMT44	nc|ENSG00000155275|Q8IYL2-3|TRMT44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8083373904228	2	530.8055	1059.59645	1.3467	0.00071482	0.050232	2.6664E-05	1.3969	0.00074149	530.8056654504567	56.042	0.61296	58.01	57.69	58.303	1.9684					64	19	4	0	0	0	0.024001	1	23444	23444		96.111	13.582	1	37458000			5304	3413	2622	2638	6513	6513					0.0690320013713972
FIEDLLFFI	9	Unmodified	_FIEDLLFFI_					0	0	0			REV__tr|A0A7D6VNN1|A0A7D6VNN1_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_18565PE=4SV=1	REV__tr|A0A7D6VNN1|A0A7D6VNN1_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_18565PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8184692263603	2	578.818076	1155.6216	4.0138	0.0023233	-1.6427	-0.0009508	2.3711	0.0013725	578.8172382589297	90.768	0.35183	91.749	91.558	91.91	0.98157					25	10	3	0	0	0	0.66839	1	38215	38215		8.5933	0	1	2174400	+		5305	15340	2623	2639	6514	6514					0.05001254939725186
FIEHLFAL	8	Unmodified	_FIEHLFAL_					0	0	0		nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2	nc|ENSG00000105576|O14787-2|TNPO2	nc|ENSG00000105576|O14787-2|TNPO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2766296267509	2	495.276378	988.538203	1.8068	0.00089489	-0.30671	-0.0001519	1.5001	0.00074299	495.2759311731131	82.553	0.33984	82.553	82.337	82.677	0					24	10	3	0	0	0	0.6384	1	34353	34353		36.466	10.125	1	3766200			5306	1527	2624	2640	6515	6515					0.0434756328252206
FIEHLFAL	8	Unmodified	_FIEHLFAL_					0	0	0		nc|ENSG00000105576|O14787-2|TNPO2;ENSG00000105576|ENST00000425528|TNPO2	nc|ENSG00000105576|O14787-2|TNPO2	nc|ENSG00000105576|O14787-2|TNPO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2847778201103	2	495.276378	988.538203	1.876	0.00092916	3.775	0.0018697	5.6511	0.0027988	495.2785855100394	80.529	0.64406	82.246	82.08	82.724	1.7167					58	20	4	0	0	0	0.42763	1	33750	33750		52.693	12.244	1	11469000			5307	1527	2624	2640	6516	6516					0.0434756328252206
FIFIAVKKKLK	11	Unmodified	_FIFIAVKKKLK_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	668.4511596560478	2	667.949759	1333.88496	0.73287	0.00048952	1.3117	0.00087618	2.0446	0.0013657	667.9507296721135	24.16	0.73144	24.402	24.073	24.804	0.24251					60	23	3	0	0	0	1.0391	1	9980	9980		1.1933	1.1933	1	1751200			5308	7142	2625	2641	6517	6517					0.23137715115194624
FIFIAVKKKLK	11	Unmodified	_FIFIAVKKKLK_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1207763552666	3	445.635598	1333.88496	1.313	0.00058511	0.73562	0.00032782	2.0486	0.00091293	445.6358522188413	23.939	1.2216	24.181	24.043	25.264	0.24252					149	39	5	0	0	0	0.14606	1	10346	10346		0	0	1	17854000			5309	7142	2625	2641	6518	6518					0.23137715115194624
FIFIAVKKKLK	11	Unmodified	_FIFIAVKKKLK_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1204101443291	3	445.635598	1333.88496	0.74082	0.00033014	0.25432	0.00011334	0.99515	0.00044347	445.63569042322587	24.6	0.48321	26.285	26.059	26.542	1.6845					24	16	2	0	0	0	0.14606	1	10373	10373		0.08335	0	1	7786300			5310	7142	2625	2641	6519	6519					0.23137715115194624
FIFIAVKKKLK	11	Unmodified	_FIFIAVKKKLK_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	445.635598	1333.88496	1.4186	0.00063216	1.0519	0.00046874	2.4704	0.0011009	445.6358666116111	22.701	0.89031	23.915	23.736	24.627	1.2145	-0.21635	0.00025754	NaN	0	83	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12979000			5311	7142	2625	2641							0.23137715115194624
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8441650271416	2	575.84222	1149.66989	1.5956	0.00091882	2.3657	0.0013623	3.9613	0.0022811	575.8432886943534	72.692	1.924	72.692	71.509	73.433	0					120	60	3	0	0	0	0.84963	2	30195	30195;30368		0.6015	0.076735	1	2170400			5312	311	2626	2642	6520;6521	6520					0.10103793370262792
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8427001833916	2	575.84222	1149.66989	1.705	0.00098179	1.9021	0.0010953	3.607	0.0020771	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.82604	1	31798	31798		2.3027	0.24298	1	3135100			5313	311	2626	2642	6522	6522					0.10103793370262792
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8439819216728	2	575.84222	1149.66989	1.8258	0.0010514	2.5438	0.0014648	4.3696	0.0025162	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.82604	1	30520	30520		2.3027	0.65011	1	2554000			5314	311	2626	2642	6523	6523					0.10103793370262792
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8440429568291	2	575.84222	1149.66989	3.3483	0.0019281	0.78855	0.00045408	4.1369	0.0023822	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.64949	9	31270	30776;30826;30867;30920;30972;31024;31270;31347;31416		9.3474	7.0447	1	7218900			5315	311	2626	2642	6524;6525;6526;6527;6528;6529;6530;6531;6532	6530					0.10103793370262792
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8442870974541	2	575.84222	1149.66989	2.788	0.0016055	0.8745	0.00050358	3.6625	0.002109	575.8424605894417	73.577	1.4663	75.373	74.434	75.9	1.7962					102	46	3	0	0	0	0.75267	8	30592	30592;30640;30685;30736;30790;30838;30930;31036		5.2307	2.9279	1	6246000			5316	311	2626	2642	6533;6534;6535;6536;6537;6538;6539;6540	6533					0.10103793370262792
FIFRVLAVW	9	Unmodified	_FIFRVLAVW_					0	0	0		ENST00000485667.1_1_3:184073137-184079267:-|nuORF;nc|ENSG00000114859|P51788-4|CLCN2;CLCN2|p.R858Hfs*2|1|0.13|ENSG00000114859|chr3:184346696-184346730|GGTCTCCGTGTCACTGCTGCTGGTGGCACTGTCTC/-|frameshift_variant;nc|ENSG00000114859|P51788-5|CLCN2;nc|ENSG00000114859|P51788-3|CLCN2;ENSG00000114859|ENST00000265593|CLCN2	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	ENST00000485667.1_1_3:184073137-184079267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8441650271416	2	575.84222	1149.66989	2.9432	0.0016948	1.4056	0.00080941	4.3489	0.0025043	575.8428738577131	74.243	0.96037	76.039	75.567	76.527	1.7962					71	30	4	0	0	0	0.75267	3	31143	31143;31191;31241		5.2307	2.9279	1	2216400			5317	311	2626	2642	6541;6542;6543	6541					0.10103793370262792
FIFTIYHWWQA	11	Unmodified	_FIFTIYHWWQA_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1;ENST00000285383.6_1_7:6895426-6899450:-|nuORF	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.5886718630791	3	504.587195	1510.73976	1.4797	0.00074663	1.4247	0.00071887	2.9044	0.0014655	504.5883780395079	29.02	0.15323	29.299	29.197	29.35	0.2793					9	4	3	0	0	0	1.0214	1	12144	12144		1.0136	0	1	356470			5318	1692	2627	2643	6544	6544					0.004816272482230488
FIGIICWIL	9	Unmodified	_FIGIICWIL_					0	0	0		tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	538.8082763552666	2	539.311906	1076.60926	1.6637	0.00089727	2.5852	0.0013942	4.2489	0.0022915	539.3137744052481	71.443	0.353	71.767	71.622	71.975	0.32359					16	10	2	0	0	0	0.099861	1	29866	29866		14.582	0	1	1456900			5319	16809	2628	2644	6545	6545					0.0740193999567964
FIIFPGKWI	9	Unmodified	_FIIFPGKWI_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;nc|ENSG00000135749|A6NKB5-2|PCNX2;ENST00000324142.4_1_1:233337898-233388268:-|nuORF	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8332397341728	2	560.83132	1119.64809	3.2133	0.0018021	2.5408	0.0014249	5.754	0.003227	560.8330469247256	60.252	0.34624	62.217	62.073	62.42	1.9653					19	10	3	0	0	0	0.15478	1	25264	25264		38.151	0	1	3194800			5320	2685	2629	2645	6546	6546					0.09304988621715893
FIIGLLSTCI	10	Unmodified	_FIIGLLSTCI_					0	0	0		tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3123657107353	2	540.312103	1078.60965	2.5073	0.0013547	0.78012	0.00042151	3.2874	0.0017762	540.3121536586101	61.113	0.43185	63.078	62.881	63.313	1.9653					30	13	3	0	0	0	0.44465	1	25671	25671		30.637	5.2372	1	1234000			5321	16565	2630	2646	6547	6547					0.07349314924840655
FIKHFFIRFV	10	Unmodified	_FIKHFFIRFV_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9335815310478	3	451.932526	1352.77575	2.4766	0.0011192	1.2137	0.00054849	3.6902	0.0016677	451.933098551888	85.54	1.3865	85.54	84.716	86.103	0					111	43	3	0	0	0	0.89803	1	35652	35652		0.13989	0.017027	1	3321100	+		5322	10900	2631	2647	6548	6548					0.11347129215710083
FIKHFFIRFV	10	Unmodified	_FIKHFFIRFV_					0	0	0			REV__ENSG00000168229|ENST00000306051|PTGDR	REV__ENSG00000168229|ENST00000306051|PTGDR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3969604372978	2	677.395151	1352.77575	2.8728	0.001946	-0.75962	-0.00051456	2.1131	0.0014314	677.3943835412952	86.11	0.7575	86.11	85.884	86.641	0					57	24	3	0	0	0	0.89803	1	35919	35919		0.40072	0.050084	1	1252200	+		5323	10900	2631	2647	6549	6549					0.11347129215710083
FIKRYYKY	8	Unmodified	_FIKRYYKY_					0	0	0			REV__tr|A0A7D7A2D7|A0A7D7A2D7_9CLOTHDIGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16435PE=4SV=1	REV__tr|A0A7D7A2D7|A0A7D7A2D7_9CLOTHDIGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16435PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	394.1739684939384	3	394.221965	1179.64407	0.20968	8.266E-05	-4.0895	-0.0016122	-3.8798	-0.0015295	394.2198962163835	19.356	0.28954	20.88	20.691	20.981	1.5237					15	9	3	0	0	0	2.3239	1	8065	8065		0	0	1	384410	+		5324	15849	2632	2648	6550	6550					0.06142899127985402
FIKVPLPW	8	Unmodified	_FIKVPLPW_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	500.7767211794853	2	500.304939	998.595324	2.6766	0.0013391	-0.93192	-0.00046624	1.7447	0.00087287	500.3040737280006	44.737	0.31042	46.103	45.9	46.21	1.3653					20	9	3	0	0	0	2.3239	1	18743	18743		28.173	0	1	2395400	+		5325	9866	2633	2649	6551	6551					0.09597030558882125
FILEIVHFS	9	Unmodified	_FILEIVHFS_					0	0	0			REV__ENST00000565424.2_1_16:47581649-47581931:+|nuORF	REV__ENST00000565424.2_1_16:47581649-47581931:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8107177615166	2	552.808042	1103.60153	1.4463	0.00079954	3.4431	0.0019034	4.8894	0.0027029	552.8097558187375	54.603	0.22792	56.572	56.467	56.695	1.9684					14	7	2	0	0	0	0.1735	1	22897	22897		36.044	0	1	1302900	+		5326	13934	2634	2650	6552	6552					0.05387503999759247
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3186523318291	3	547.317262	1638.92996	0.90086	0.00049306	1.5777	0.0008635	2.4786	0.0013566	547.6524234777273	28.348	0.27842	28.348	28.226	28.504	0					15	8	2	0	0	0	1.0402	1	11903	11903		0.08335	0.08335	1	1500800	+		5327	12255	2635	2651	6553	6553					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3177978396416	3	547.317262	1638.92996	1.2852	0.00070339	0.087906	4.8112E-05	1.3731	0.0007515	547.317215972702	37.759	0.66149	37.759	37.386	38.047	0					70	22	5	0	0	0	1.0362	3	15836	15746;15796;15836		1.3296	1.3296	1	14782000	+		5328	12255	2635	2651	6554;6555;6556	6556					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	547.6520263552666	3	547.317262	1638.92996	1.2852	0.00070339	0.087906	4.8112E-05	1.3731	0.0007515	547.317215972702	37.759	0.66149	37.759	37.386	38.047	0					70	22	5	0	0	0	0.14606	1	15796	15796		0.45452	0.45452	1	14782000	+		5329	12255	2635	2651	6557	6557					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.6517211794853	3	547.317262	1638.92996	1.5021	0.00082212	-0.16949	-9.2765E-05	1.3326	0.00072935	547.3172548819066	37.209	0.49504	37.514	37.271	37.766	0.30497					62	21	4	0	0	0	1.0402	3	15591	15591;15638;15687		0.08335	0.08335	1	7573200	+		5330	12255	2635	2651	6558;6559;6560	6558					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	547.3168823122978	3	547.317262	1638.92996	1.5021	0.00082212	-0.16949	-9.2765E-05	1.3326	0.00072935	547.3172548819066	37.209	0.49504	37.514	37.271	37.766	0.30497					62	21	4	0	0	0	0.14606	1	15687	15687		0.08335	0.08335	1	7573200	+		5331	12255	2635	2651	6561	6561					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3162109255791	3	547.317262	1638.92996	0.10375	5.6783E-05	0.57002	0.00031198	0.67377	0.00036876	547.3174969868658	35.342	0.23708	36.617	36.52	36.757	1.2746					31	21	2	0	0	0	1.0402	1	14856	14856		0.08335	0.08335	1	7160400	+		5332	12255	2635	2651	6562	6562					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	547.3177978396416	3	547.317262	1638.92996	0.10375	5.6783E-05	0.57002	0.00031198	0.67377	0.00036876	547.3174969868658	35.342	0.23708	36.617	36.52	36.757	1.2746					31	21	2	0	0	0	0.14606	1	14812	14812		0.08335	0.08335	1	7160400	+		5333	12255	2635	2651	6563	6563					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3204833865166	3	547.317262	1638.92996	0.76802	0.00042035	0.25086	0.0001373	1.0189	0.00055765	547.3170826498987	35.008	0.19667	36.826	36.698	36.894	1.8176					23	16	2	0	0	0	1.0402	1	14671	14671		0.08335	0.08335	1	4588900	+		5334	12255	2635	2651	6564	6564					0.13604958701102987
FILFLRRFWWR	11	Unmodified	_FILFLRRFWWR_					0	0	0			REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	REV__ENST00000281830.3_1_2:223918801-223918864:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	547.317262	1638.92996	0.76802	0.00042035	0.25086	0.0001373	1.0189	0.00055765	547.3170826498987	35.008	0.19667	36.826	36.698	36.894	1.8176	0.10437	-0.00023592	NaN	0.08335	23	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4588900	+		5335	12255	2635	2651							0.13604958701102987
FILLPKKEIGW	11	Unmodified	_FILLPKKEIGW_					0	0	0		ENST00000262126.8_1_18:9283072-9283150:+|nuORF	ENST00000262126.8_1_18:9283072-9283150:+|nuORF	ENST00000262126.8_1_18:9283072-9283150:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4106933474541	2	672.407924	1342.80129	2.394	0.0016098	1.8295	0.0012302	4.2235	0.0028399	672.4089312946678	80.34	1.2635	81.591	80.707	81.971	1.2512					68	40	2	0	0	0	1.0388	1	33727	33727		1.4819	0	1	1747900			5336	5631	2636	2652	6565	6565					0.14360558947487334
FILVPIFI	8	Unmodified	_FILVPIFI_					0	0	0			REV__ENST00000413189.1_1_1:25451546-25451861:-|nuORF	REV__ENST00000413189.1_1_1:25451546-25451861:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	481.3081237673759	2	481.30969	960.604826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.367	1	63.367	62.867	63.867	0								0	0	0	1.0178	1	26418	26418		24.21	0	1		+		5337	12928	2637	2653	6566	6566					0.1229479884441389
FIMEGTLTRV	10	Unmodified	_FIMEGTLTRV_					0	0	0		SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant;ENSG00000115904|ENST00000402219|SOS1	SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant	SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.8166992068291	2	583.815541	1165.61653	1.9431	0.0011344	-0.94626	-0.00055244	0.99681	0.00058195	583.8150747651829	49.42	0.27612	50.811	50.704	50.98	1.3911					14	8	2	0	0	0	0.80702	1	20725	20725		11.495	2.1116	1	1139100			5338	1942	2638	2654	6567	6567					0.04034627805413038
FIMEGTLTRV	10	Unmodified	_FIMEGTLTRV_					0	0	0		SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant;ENSG00000115904|ENST00000402219|SOS1	SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant	SOS1|p.L1273Cfs*6|1|0.07|ENSG00000115904|chr2:38986009-38986009|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	583.815541	1165.61653	1.775	0.0010363	-0.27917	-0.00016298	1.4958	0.00087328	583.8160752770883	48.895	0.24841	50.872	50.73	50.978	1.9772	0.030202	0.00036724	NaN	11.495	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	725290			5339	1942	2638	2654							0.04034627805413038
FINGLTVLY	9	Unmodified	_FINGLTVLY_					0	0	0			REV__ENSG00000204518|ENST00000376221|AADACL4	REV__ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2969238162041	2	520.294768	1038.57498	3.9965	0.0020793	-0.070407	-3.6632E-05	3.9261	0.0020427	520.2948279018768	82.184	1.0984	83.396	83.038	84.136	1.2125					88	34	4	0	0	0	0.59203	1	34705	34705		11.64	3.7301	1	9707600	+		5340	11786	2639	2655	6568	6568					0.05723815108422059
FINGVSTYKF	10	Unmodified	_FINGVSTYKF_					0	0	0		tr|A0A7D6ZW79|A0A7D6ZW79_9CLOTFlagellarbasalbodyrodproteinFlgGOS=ClostridiumintestinaleOX=36845GN=flgGPE=3SV=1	tr|A0A7D6ZW79|A0A7D6ZW79_9CLOTFlagellarbasalbodyrodproteinFlgGOS=ClostridiumintestinaleOX=36845GN=flgGPE=3SV=1	tr|A0A7D6ZW79|A0A7D6ZW79_9CLOTFlagellarbasalbodyrodproteinFlgGOS=ClostridiumintestinaleOX=36845GN=flgGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	392.5416137576103	3	392.541363	1174.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.228	1	36.051	35.551	36.551	1.8227								0	0	0	0.12485	1	14352	14352		35.612	0	1				5341	17165	2640	2656	6569	6569					0.02194298648782933
FINKFRTIR	9	Unmodified	_FINKFRTIR_					0	0	0			REV__tr|A0A7D6VSN3|A0A7D6VSN3_9CLOTAscorbate-specificPTSsystemEIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_11330PE=3SV=1	REV__tr|A0A7D6VSN3|A0A7D6VSN3_9CLOTAscorbate-specificPTSsystemEIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_11330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8586303591728	2	597.858932	1193.70331	2.285	0.0013661	-3.5671	-0.0021326	-1.2821	-0.00076652	597.8564739538344	75.581	0.80588	75.902	75.678	76.484	0.32164					58	25	3	0	0	0	0.83753	1	31596	31596		1.8442	0.19162	1	1165200	+		5342	15456	2641	2657	6570	6570					0.11420795142180395
FIPLLWYKK	9	Unmodified	_FIPLLWYKK_					0	0	0			REV__ENST00000517334.1_1_8:17065528-17067595:+|nuORF	REV__ENST00000517334.1_1_8:17065528-17067595:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	403.2474243044853	3	403.24611	1206.7165	3.241	0.0013069	0.0065933	2.6587E-06	3.2476	0.0013096	403.24614540346977	91.365	0.5256	92.731	92.406	92.932	1.366					50	16	4	0	0	0	0.85019	1	38489	38489		0.23584	0	1	14175000	+		5343	9128	2642	2658	6571	6571					0.12141233201532486
FIPNSKVQL	9	Unmodified	_FIPNSKVQL_					0	0	0		ENSG00000136463|ENST00000258975|TACO1	ENSG00000136463|ENST00000258975|TACO1	ENSG00000136463|ENST00000258975|TACO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3049804568291	2	523.305667	1044.59678	3.0826	0.0016132	-2.8728	-0.0015034	0.20981	0.0001098	523.3037007229581	70.837	1.1363	72.19	71.147	72.284	1.3536					58	35	3	0	0	0	0.70108	1	29507	29507		7.2892	0.56607	1	2576700			5344	2726	2643	2659	6572	6572					0.0762661985700106
FIQARLNEI	9	Unmodified	_FIQARLNEI_					0	0	0			REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3130370974541	2	552.314023	1102.61349	0.81997	0.00045288	-2.0157	-0.0011133	-1.1957	-0.00066041	552.3131297228539	50.955	0.2709	52.348	52.197	52.468	1.3938					14	8	3	0	0	0	0.42305	1	21321	21321		19.257	2.1441	1	1542200	+		5345	13986	2644	2660	6573	6573					0.06629120742945815
FIQARLNEI	9	Unmodified	_FIQARLNEI_					0	0	0			REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	552.314023	1102.61349	0.81997	0.00045288	-2.0157	-0.0011133	-1.1957	-0.00066041	552.3131297228539	50.955	0.2709	52.348	52.197	52.468	1.3938	-0.11056	-0.0021016	NaN	19.257	14	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1542200	+		5346	13986	2644	2660							0.06629120742945815
FIQARLNEI	9	Unmodified	_FIQARLNEI_					0	0	0			REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.314023	1102.61349	0.32919	0.00018182	3.5452	0.0019581	3.8744	0.0021399	552.3174989073198	50.594	0.30397	52.569	52.515	52.819	1.9753	0.11056	0.0040411	NaN	19.257	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1884000	+		5347	13986	2644	2660							0.06629120742945815
FIQEIEHAL	9	Unmodified	_FIQEIEHAL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;CALD1-EXOC4|1|fusion	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	549.7504760622978	2	550.292756	1098.57096	1.5748	0.00086659	1.5344	0.00084436	3.1092	0.0017109	550.2925406825034	50.061	0.24427	52.039	51.914	52.159	1.9772					10	7	2	0	0	0	0.078322	1	20985	20985		34.102	13.231	1	624230			5348	2496	2645	2661	6574	6574					0.025617256147143053
FIQGIAIIVYR	11	Unmodified	_FIQGIAIIVYR_					0	0	0		ENSG00000071967|ENST00000321348|CYBRD1;ENST00000468308.1_1_2:172378863-172407640:+|nuORF	ENSG00000071967|ENST00000321348|CYBRD1	ENSG00000071967|ENST00000321348|CYBRD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	646.8881713747978	2	646.889898	1291.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.347	1	14.347	13.847	14.847	0								0	0	0	0.63775	1	5952	5952		2.7352	0.67545	1				5349	875	2646	2662	6575	6575					0.13103101770639114
FIQQNLSG	8	Unmodified	_FIQQNLSG_					0	0	0		ENST00000557380.5_1_14:50318303-50318570:-|nuORF	ENST00000557380.5_1_14:50318303-50318570:-|nuORF	ENST00000557380.5_1_14:50318303-50318570:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7379028201103	2	453.737617	905.460681	0.29692	0.00013472	0.74365	0.00033742	1.0406	0.00047214	453.7379103735376	11.987	0.27968	12.774	12.629	12.908	0.78751					21	8	4	0	0	0	0.41488	1	4966	4966		53.576	2.7205	1	4824200			5350	7309	2647	2663	6576	6576					0.004169253463373934
FIQTRIQL	8	Unmodified	_FIQTRIQL_					0	0	0			REV__ENST00000253693.6_1_3:15292763-15292877:+|nuORF	REV__ENST00000253693.6_1_3:15292763-15292877:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8055908083916	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.012	1	67.921	67.421	68.421	1.9085								0	0	0	1.0178	1	27694	27694		24.674	5.4169	1		+		5351	12151	2648	2664	6577	6577					0.08902039576844345
FIRDKFLL	8	Unmodified	_FIRDKFLL_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3210937380791	2	526.318577	1050.6226	3.1754	0.0016713	2.6126	0.0013751	5.7881	0.0030464	526.3200234869875	74.793	0.52689	76.099	75.847	76.374	1.3063					42	16	4	0	0	0	0.65897	2	31346	31346;31395		42.095	7.6928	1	13994000	+		5352	10026	2649	2665	6578;6579	6578					0.09931514099275773
FIRDKFLL	8	Unmodified	_FIRDKFLL_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3203613162041	2	526.318577	1050.6226	3.0345	0.0015971	1.1962	0.00062956	4.2307	0.0022267	526.3192643501915	74.28	0.43395	76.076	75.808	76.242	1.7962					42	13	4	0	0	0	0.65897	2	31150	31110;31150		42.095	7.6928	1	11646000	+		5353	10026	2649	2665	6580;6581	6581					0.09931514099275773
FIRDKFLL	8	Unmodified	_FIRDKFLL_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.318577	1050.6226	3.1754	0.0016713	2.6126	0.0013751	5.7881	0.0030464	526.3200234869875	74.793	0.52689	76.099	75.847	76.374	1.3063	0.011619	0.00075336	NaN	42.095	42	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13994000	+		5354	10026	2649	2665							0.09931514099275773
FIRDKFLL	8	Unmodified	_FIRDKFLL_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.318577	1050.6226	3.0345	0.0015971	1.1962	0.00062956	4.2307	0.0022267	526.3192643501915	74.28	0.43395	76.076	75.808	76.242	1.7962	-0.011619	-0.00073766	NaN	42.095	42	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11646000	+		5355	10026	2649	2665							0.09931514099275773
FIRKQCVDH	9	Unmodified	_FIRKQCVDH_					0	0	0		ENST00000485344.6_1_2:240954116-240964718:-|nuORF;ENSG00000130414|ENST00000252711|NDUFA10	ENST00000485344.6_1_2:240954116-240964718:-|nuORF	ENST00000485344.6_1_2:240954116-240964718:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	382.5332214236259	3	382.534326	1144.58115	0.60333	0.00023079	-1.887	-0.00072183	-1.2836	-0.00049104	382.5333443200318	86.261	0.41867	86.261	86.008	86.427	0					25	13	2	0	0	0	0.82114	1	35912	35912		2.4985	1.1688	1	5216500			5356	2435	2650	2666	6582	6582					0.014640100682981938
FISELAEYL	9	Unmodified	_FISELAEYL_					0	0	0		nc|ENSG00000014123|O94874-3|UFL1;nc|ENSG00000014123|O94874-2|UFL1;ENSG00000014123|ENST00000369278|UFL1	nc|ENSG00000014123|O94874-3|UFL1	nc|ENSG00000014123|O94874-3|UFL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.2805663943291	2	542.78169	1083.54883	2.3739	0.0012885	-3.0789	-0.0016711	-0.70493	-0.00038262	543.2839401635639	47.952	0.12238	49.928	49.867	49.99	1.9766					5	3	2	0	0	0	0.11333	1	20094	20094		13.508	5.5977	1	2274300			5357	591	2651	2667	6583	6583					0.010395011462833281
FISLVKFIL	9	Unmodified	_FISLVKFIL_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3501464724541	2	540.346803	1078.67905	4.221	0.0022808	0.86389	0.0004668	5.0849	0.0027476	540.3472936943939	90.691	0.6397	91.672	91.462	92.102	0.98156					40	19	3	0	0	0	0.091139	3	38235	38173;38235;38278		52.268	12.319	1	2063100			5358	7679	2652	2668	6584;6585;6586	6585					0.14286141935940577
FISLVKFIL	9	Unmodified	_FISLVKFIL_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|99|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3494750857353	2	540.346803	1078.67905	4.1445	0.0022395	0.40333	0.00021794	4.5478	0.0024574	540.3473072102238	90.205	0.63131	91.61	91.368	92	1.4045					43	19	3	0	0	0	0.10993	2	37997	37997;38055		46.021	7.4881	1	1760200			5359	7679	2652	2668	6587;6588	6587					0.14286141935940577
FISSDALSTR	10	Unmodified	_FISSDALSTR_					0	0	0			REV__nc|ENSG00000114346|Q9H8V3-2|ECT2	REV__nc|ENSG00000114346|Q9H8V3-2|ECT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	548.3273803591728	2	548.785296	1095.55604	3.2529	0.0017852	0.88335	0.00048477	4.1363	0.0022699	549.2872803380104	73.842	0.50047	75.16	74.873	75.374	1.318					35	15	3	0	0	0	0.12311	1	31010	31010		32.786	5.902	1	1176400	+		5360	8315	2653	2669	6589	6589					0.012082337467063553
FISSDALSTR	10	Unmodified	_FISSDALSTR_					0	0	0			REV__nc|ENSG00000114346|Q9H8V3-2|ECT2	REV__nc|ENSG00000114346|Q9H8V3-2|ECT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	548.3273803591728	2	548.785296	1095.55604	2.5857	0.001419	0.60904	0.00033423	3.1947	0.0017532	548.7858227723343	73.215	0.53327	75.025	74.828	75.361	1.8101					38	16	4	0	0	0	0.12311	1	30725	30725		32.786	2.1491	1	671960	+		5361	8315	2653	2669	6590	6590					0.012082337467063553
FISVLHVH	8	Unmodified	_FISVLHVH_					0	0	0			REV__ENSG00000179826|ENST00000621697|MRGPRX3	REV__ENSG00000179826|ENST00000621697|MRGPRX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1994506716728	2	476.27417	950.533787	2.5044	0.0011928	4.2683	0.0020329	6.7727	0.0032257	476.2750187776619	63.537	0.30248	64.95	64.753	65.055	1.4134					17	9	2	0	0	0	2.3239	1	26665	26665		5.7604	0	1	1225600	+		5362	11284	2654	2670	6591	6591					0.056540988596111674
FISVLHVH	8	Unmodified	_FISVLHVH_					0	0	0			REV__ENSG00000179826|ENST00000621697|MRGPRX3	REV__ENSG00000179826|ENST00000621697|MRGPRX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1988403201103	2	476.27417	950.533787	2.4218	0.0011534	4.3955	0.0020935	6.8173	0.0032469	476.275939991766	62.915	0.30624	64.86	64.752	65.058	1.9444					16	9	2	0	0	0	2.3239	1	26441	26441		5.7604	0	1	1437400	+		5363	11284	2654	2670	6592	6592					0.056540988596111674
FITGLMILKKY	11	Unmodified	_FITGLMILKKY_					0	0	0			REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8979980349541	2	663.896334	1325.77812	2.556	0.0016969	-1.1336	-0.0007526	1.4224	0.00094434	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0366	1	35287	35287		1.1933	0	1	6935600	+		5364	15087	2655	2671	6593	6593					0.12825796838524184
FITGLMILKKY	11	Unmodified	_FITGLMILKKY_					0	0	0			REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8968994021416	2	663.896334	1325.77812	2.3028	0.0015288	-0.48865	-0.00032441	1.8142	0.0012044	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0366	1	35265	35265		1.1933	0.12188	1	5935800	+		5365	15087	2655	2671	6594	6594					0.12825796838524184
FITGLMILKKY	11	Unmodified	_FITGLMILKKY_					0	0	0			REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	REV__tr|A0A553SPG5|A0A553SPG5_NIACICamSfamilysexpheromoneproteinOS=NialliacirculansOX=1397GN=CEQ21_26380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8958618044853	2	663.896334	1325.77812	3.0629	0.0020334	-0.30855	-0.00020485	2.7543	0.0018286	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0366	1	34989	34989		1.1933	0.12188	1	4887400	+		5366	15087	2655	2671	6595	6595					0.12825796838524184
FITQDLVI	8	Unmodified	_FITQDLVI_					0	0	0			REV__ENST00000306100.9_1_4:163084851-163084935:-|nuORF	REV__ENST00000306100.9_1_4:163084851-163084935:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5491210818291	1	948.54006	947.532783	2.2365	0.0021214	0.75218	0.00071347	2.9886	0.0028349	948.5406799814609	82.995	0.52486	84.208	83.951	84.476	1.2125					49	16	4	0	0	0	0.64261	1	34755	34755		36.044	3.7387	1	35106000	+		5367	12335	2656	2672	6596	6596					0.056918397000458754
FIVEETHTI	9	Unmodified	_FIVEETHTI_					0	0	0		ZNF460|p.L560Hfs*26|1|0.07|ENSG00000197714|chr19:57292219-57292220|-/A|frameshift_variant	ZNF460|p.L560Hfs*26|1|0.07|ENSG00000197714|chr19:57292219-57292220|-/A|frameshift_variant	ZNF460|p.L560Hfs*26|1|0.07|ENSG00000197714|chr19:57292219-57292220|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.7856323122978	2	544.784764	1087.55498	2.254	0.001228	0.66667	0.00036319	2.9207	0.0015912	544.7847509285551	82.72	0.30482	82.99	82.847	83.152	0.27029					15	9	2	0	0	0	0.44535	1	34638	34638		18.135	3.5533	1	913920			5368	17365	2657	2673	6597	6597					0.014700193778026005
FIVQFAPVL	9	Unmodified	_FIVQFAPVL_					0	0	0			REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6257812380791	2	517.307678	1032.6008	1.8662	0.00096538	-3.2052	-0.001658	-1.339	-0.00069267	517.3058280283684	49.544	0.28453	51.522	51.381	51.665	1.9772					19	8	3	0	0	0	0.084274	1	20712	20712		30.225	1.738	1	6209600	+		5369	14531	2658	2674	6598	6598					0.08580709350690086
FIVQFAPVL	9	Unmodified	_FIVQFAPVL_					0	0	0			REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	517.307678	1032.6008	2.2074	0.0011419	-5.2709	-0.0027267	-3.0635	-0.0015848	517.3044405765295	51.961	0.34032	51.961	51.789	52.13	0	0.25383	-0.00077066	NaN	30.225	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1809500	+		5370	14531	2658	2674							0.08580709350690086
FIVQFAPVL	9	Unmodified	_FIVQFAPVL_					0	0	0			REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	REV__nc|ENSG00000211795|A0A0B4J262|TRAV8-6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	517.307678	1032.6008	1.8744	0.00096965	-9.1518	-0.0047343	-7.2774	-0.0037646	517.3015421848951	51.469	0.24712	51.795	51.633	51.88	0.32554	0.087391	-0.0047859	NaN	30.225	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2180200	+		5371	14531	2658	2674							0.08580709350690086
FIVQGNSIII	10	Unmodified	_FIVQGNSIII_					0	0	0			REV__tr|A0A7D6VQ75|A0A7D6VQ75_9CLOTPhosphodiesterglycosidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01605PE=4SV=1	REV__tr|A0A7D6VQ75|A0A7D6VQ75_9CLOTPhosphodiesterglycosidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3277465701103	2	552.326599	1102.63865	2.8119	0.0015531	-0.10525	-5.8135E-05	2.7067	0.001495	552.3265805825157	62.477	0.6183	64.422	64.196	64.814	1.9448					53	19	4	0	0	0	0.60583	1	26271	26271		22.736	2.3217	1	36479000	+		5372	15377	2659	2675	6599	6599					0.09143175545546
FIWDFIEKV	9	Unmodified	_FIWDFIEKV_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;DNAJB9-DENND5B|1|fusion;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8253661990166	2	598.82115	1195.62775	4.6897	0.0028083	0.9745	0.00058355	5.6642	0.0033918	598.8206676235617	87.511	0.30801	88.602	88.49	88.798	1.0918					19	9	3	0	0	0	0.11669	1	36942	36942		43.772	21.036	1	955050			5373	419	2660	2676	6600	6600					0.037757731712190434
FIWDFIEKV	9	Unmodified	_FIWDFIEKV_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;DNAJB9-DENND5B|1|fusion;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	598.82115	1195.62775	2.7858	0.0016682	-0.29894	-0.00017901	2.4868	0.0014892	598.8205098244507	88.887	0.19264	88.887	88.762	88.955	0	0.21708	-0.00084244	NaN	43.772	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	304290			5374	419	2660	2676							0.037757731712190434
FIWDFIEKV	9	Unmodified	_FIWDFIEKV_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;DNAJB9-DENND5B|1|fusion;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	598.82115	1195.62775	2.4993	0.0014967	1.1549	0.0006916	3.6543	0.0021883	598.8221772765087	88.39	0.21503	88.625	88.508	88.723	0.2347	-0.044833	0.00089878	NaN	43.772	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	394520			5375	419	2660	2676							0.037757731712190434
FIWDFIEKV	9	Unmodified	_FIWDFIEKV_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;DNAJB9-DENND5B|1|fusion;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	598.82115	1195.62775	4.7174	0.0028249	-0.082759	-4.9558E-05	4.6347	0.0027753	598.8211113194122	87.07	0.37036	88.565	88.395	88.766	1.4953	-0.10462	-0.00058353	NaN	43.772	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1351100			5376	419	2660	2676							0.037757731712190434
FIWENIHTL	9	Unmodified	_FIWENIHTL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.8093749880791	2	586.808574	1171.60259	1.8338	0.0010761	0.14928	8.7599E-05	1.9831	0.0011637	586.8087774671138	66.735	0.25215	66.735	66.577	66.829	0					14	7	3	0	0	0	0.15635	1	27798	27798		37.974	16.227	1	736770			5377	3306	2661	2677	6601	6601					0.023657183686509597
FIWENIHTL	9	Unmodified	_FIWENIHTL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	586.8109619021416	2	586.808574	1171.60259	1.8238	0.0010702	1.9251	0.0011296	3.7489	0.0021999	586.8092269461541	66.218	0.2522	66.543	66.401	66.653	0.32449					13	7	2	0	0	0	0.15635	1	27707	27707		37.974	17.52	1	891530			5378	3306	2661	2677	6602	6602					0.023657183686509597
FIWENIHTL	9	Unmodified	_FIWENIHTL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	586.808574	1171.60259	3.0725	0.0018029	4.2817	0.0025126	7.3542	0.0043155	586.8116183096206	64.986	0.22171	66.385	66.255	66.476	1.3989	-0.12361	0.003186	NaN	37.974	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	735170			5379	3306	2661	2677							0.023657183686509597
FIWENIHTL	9	Unmodified	_FIWENIHTL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	586.808574	1171.60259	2.1733	0.0012753	3.2723	0.0019202	5.4456	0.0031955	586.8105199931822	64.444	0.19304	66.372	66.294	66.487	1.928	-0.13689	0.0020013	NaN	37.974	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	630820			5380	3306	2661	2677							0.023657183686509597
FIWHCHTL	8	Unmodified	_FIWHCHTL_					0	0	0			REV__NYNRIN|p.N1379H|1|0.06|ENSG00000205978|chr14:24415884-24415884|A/C|missense_variant	REV__NYNRIN|p.N1379H|1|0.06|ENSG00000205978|chr14:24415884-24415884|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7542602419853	2	528.75783	1055.50111	1.0771	0.00056954	-4.2927	-0.0022698	-3.2155	-0.0017002	528.7556854370052	58.475	0.34644	59.893	59.752	60.099	1.4181					18	10	2	0	0	0	0.86202	2	24511	24511;24592		15.768	7.1749	1	3886300	+		5381	14586	2662	2678	6603;6604	6603					-0.024424315348824166
FIWKVKFL	8	Unmodified	_FIWKVKFL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024466	REV__CON__ENSEMBL:ENSBTAP00000024466	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	540.3310424685478	2	540.833863	1079.65317	1.4087	0.00076186	-2.3296	-0.0012599	-0.9209	-0.00049805	540.8326215389898	69.511	0.6946	69.511	69.234	69.929	0					36	21	2	0	0	0	2.3239	1	29106	29106		6.3541	2.0249	1	973290	+	+	5382	8374	2663	2679	6605	6605					0.1165329248431135
FIWRMFLL	8	Unmodified	_FIWRMFLL_					0	0	0			REV__ENST00000487662.1_1_3:57643398-57643446:-|nuORF	REV__ENST00000487662.1_1_3:57643398-57643446:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3149291872978	2	563.317523	1124.62049	2.5093	0.0014135	1.0211	0.0005752	3.5304	0.0019887	563.3178781751456	87.727	0.49886	87.962	87.855	88.354	0.23471					29	15	2	0	0	0	0.88409	1	36881	36881		6.3541	1.1234	1	1196100	+		5383	13403	2664	2680	6606	6606					0.0631676208981844
FIYEIQQL	8	Unmodified	_FIYEIQQL_					0	0	0		tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2857543826103	2	527.2844	1052.55425	4.1362	0.002181	-0.758	-0.00039968	3.3782	0.0017813	527.2840117334724	81.672	0.31221	83.368	83.195	83.508	1.6959					15	9	2	0	0	0	0.86202	1	34273	34273		15.768	2.2603	1	917630			5384	16239	2665	2681	6607	6607					0.030072247287762366
FIYEIQQL	8	Unmodified	_FIYEIQQL_					0	0	0		tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	tr|A0A553SJC0|A0A553SJC0_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_16545PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.2844	1052.55425	3.9918	0.0021048	-0.76626	-0.00040403	3.2255	0.0017008	527.2840009710116	82.168	0.28117	83.38	83.192	83.474	1.2125	0.0062823	-6.5419E-06	NaN	15.768	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	746710			5385	16239	2665	2681							0.030072247287762366
FIYLCTVNPVL	11	Unmodified	_FIYLCTVNPVL_					0	0	0		tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3566772341728	2	641.349217	1280.68388	1.955	0.0012538	-0.76096	-0.00048804	1.194	0.0007658	641.3493859953809	76.736	0.77209	78.503	78.19	78.962	1.7672					76	23	5	0	0	0	0.83203	1	32294	32294		13.906	1.3745	1	20751000			5386	17247	2666	2682	6608	6608					0.054766580163914114
FIYNINLAL	9	Unmodified	_FIYNINLAL_					0	0	0			REV__tr|A0A7D7A2L4|A0A7D7A2L4_9CLOTSignaltransductionhistidinekinasesubgroup3dimerisationandphosphoacceptordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20510PE=4SV=1	REV__tr|A0A7D7A2L4|A0A7D7A2L4_9CLOTSignaltransductionhistidinekinasesubgroup3dimerisationandphosphoacceptordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20510PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1080.604052722454	1	1080.60881	1079.60153	1.3956	0.0015081	-3.2222	-0.003482	-1.8266	-0.0019738	1080.6049378994262	98.601	0.081459	98.601	98.556	98.638	0					4	2	2	0	0	0	0.13873	1	41249	41249		39.957	7.6518	1	14943000	+		5387	15852	2667	2683	6609	6609					0.06491503999745873
FIYNVLIL	8	Unmodified	_FIYNVLIL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000023402	REV__CON__ENSEMBL:ENSBTAP00000023402	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8004943728447	2	497.802229	993.589904	1.8237	0.00090783	-3.1929	-0.0015894	-1.3692	-0.00068158	497.80112315481387	46.61	0.22148	47.985	47.893	48.115	1.3751					11	6	2	0	0	0	0.72134	1	19541	19541		28.173	0	1	431640	+	+	5388	8372	2668	2684	6610	6610					0.09285306976426
FKAFVFLLIVF	11	Unmodified	_FKAFVFLLIVF_					0	0	0			REV__tr|A0A553SPG4|A0A553SPG4_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_26325PE=4SV=1	REV__tr|A0A553SPG4|A0A553SPG4_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_26325PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.6091186404228	3	448.609049	1342.80532	2.9067	0.001304	-2.2944	-0.0010293	0.61222	0.00027465	448.6079427881507	83.497	1.3326	83.768	83.306	84.639	0.27029					88	42	3	0	0	0	1.0388	1	34913	34913		0.50596	0.051438	1	1862300	+		5389	15086	2669	2685	6611	6611					0.14762648441205783
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2118713259697	3	417.211906	1248.61389	-0.29196	-0.00012181	-0.62436	-0.00026049	-0.91632	-0.0003823	417.2123023266165	18.238	3.818	18.238	17.87	21.688	0					393	125	6	0	0	0	0.045001	25	7785	7498;7546;7587;7628;7667;7706;7746;7785;7824;7873;7926;7975;8017;8065;8108;8165;8242;8292;8341;8390;8448;8500;8553;8615;8731		85.729	59.732	1	430800000		+	5390	341	2670	2686	6612;6613;6614;6615;6616;6617;6618;6619;6620;6621;6622;6623;6624;6625;6626;6627;6628;6629;6630;6631;6632;6633;6634;6635;6636	6619					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.1602966189384	4	313.160748	1248.61389	-3.2627	-0.0010218	1.4166	0.00044362	-1.8461	-0.00057814	313.16134244455156	18.194	1.7327	18.194	17.87	19.603	0					185	58	6	0	0	0	0.057855	3	7578	7535;7578;7617		66.55	47.495	1	123160000		+	5391	341	2670	2686	6637;6638;6639	6638					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	625.3135864138603	2	625.31422	1248.61389	1.0572	0.00066108	-1.7224	-0.0010771	-0.66525	-0.00041599	625.3130426717628	18.237	0.58915	18.237	18.026	18.615	0					71	21	4	0	0	0	0.060856	4	7633	7538;7579;7633;7687		142.94	69.973	1	18490000		+	5392	341	2670	2686	6640;6641;6642;6643	6642					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2125121951103	3	417.211906	1248.61389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.118	1	22.118	21.618	22.618	0								0	0	0	0.20696	1	9199	9199		33.632	24.388	1			+	5393	341	2670	2686	6644	6644					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2123596072197	3	417.211906	1248.61389	0.70991	0.00029618	-0.35602	-0.00014854	0.35389	0.00014765	417.2121967121784	17.642	2.5295	17.814	17.562	20.091	0.17285					262	85	6	0	0	0	0.045001	10	7468	7248;7297;7348;7387;7425;7468;7518;7556;7601;7662		106.29	68.518	1	147430000		+	5394	341	2670	2686	6645;6646;6647;6648;6649;6650;6651;6652;6653;6654	6650					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	625.3148681521416	2	625.31422	1248.61389	0.35767	0.00022366	0.27383	0.00017123	0.63151	0.00039489	625.3145908625696	17.642	0.52337	17.814	17.647	18.17	0.17285					42	16	4	0	0	0	0.055783	2	7301	7301;7352		90.964	50.725	1	5304000		+	5395	341	2670	2686	6655;6656	6655					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.1606933474541	4	313.160748	1248.61389	-0.23303	-7.2977E-05	-0.39052	-0.0001223	-0.62356	-0.00019527	313.1607880397006	17.67	1.1299	17.843	17.562	18.692	0.17285					118	39	4	0	0	0	0.057855	1	7322	7322		66.55	45.678	1	64287000		+	5396	341	2670	2686	6657	6657					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2126342654228	3	417.211906	1248.61389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.111	1	20.321	19.821	20.821	0.21024								0	0	0	0.64977	1	8355	8355		12.856	7.4532	1			+	5397	341	2670	2686	6658	6658					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.2120544314384	3	417.211906	1248.61389	0.25103	0.00010473	0.069395	2.8952E-05	0.32042	0.00013368	417.21218343724644	16.816	1.5747	17.714	17.516	19.091	0.89794					164	58	5	0	0	0	0.045001	3	6997	6957;6997;7048		90.104	58.468	1	104420000		+	5398	341	2670	2686	6659;6660;6661	6660					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.1602966189384	4	313.160748	1248.61389	-0.86179	-0.00026988	0.0065016	2.036E-06	-0.85528	-0.00026784	313.1607792881664	16.874	0.57487	17.772	17.538	18.113	0.89794					66	19	5	0	0	0	0.082561	2	7012	6970;7012		59.177	42.902	1	28942000		+	5399	341	2670	2686	6662;6663	6663					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.3140746951103	2	625.31422	1248.61389	0.11178	6.9897E-05	0.14097	8.8153E-05	0.25275	0.00015805	625.3142650386803	16.817	0.31095	17.715	17.565	17.876	0.89794					28	10	4	0	0	0	0.1068	2	6985	6985;7039		62.78	35.557	1	3183900		+	5400	341	2670	2686	6664;6665	6664					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.2127563357353	3	417.211906	1248.61389	0.24232	0.0001011	0.11212	4.6778E-05	0.35444	0.00014788	417.2120770498573	16.56	1.3598	17.863	17.637	18.996	1.3023					123	45	6	0	0	0	0.0487	4	6932	6847;6891;6932;6980		70.321	50.342	1	67762000		+	5401	341	2670	2686	6666;6667;6668;6669	6668					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.1602355837822	4	313.160748	1248.61389	-0.40664	-0.00012734	-0.58652	-0.00018367	-0.99316	-0.00031102	313.16057028274463	16.542	0.89598	17.844	17.637	18.533	1.3023					82	29	5	0	0	0	0.057855	2	6893	6851;6893		66.55	50.275	1	16699000		+	5402	341	2670	2686	6670;6671	6671					-0.0004750432788114267
FKDLGEEHFK	10	Unmodified	_FKDLGEEHFK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.3143798708916	2	625.31422	1248.61389	-0.2722	-0.00017021	0.62145	0.0003886	0.34926	0.00021839	625.3139996769494	16.61	0.328	17.912	17.7	18.028	1.3023					24	10	3	0	0	0	0.084803	1	6871	6871		66.683	24.727	1	1577500		+	5403	341	2670	2686	6672	6672					-0.0004750432788114267
FKDQKSGGDEK	11	Unmodified	_FKDQKSGGDEK_					0	0	0			REV__tr|A0A553SQ74|A0A553SQ74_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_22395PE=4SV=1	REV__tr|A0A553SQ74|A0A553SQ74_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_22395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.8758117556572	3	413.53857	1237.59388	-0.69543	-0.00028759	3.024	0.0012506	2.3286	0.00096296	413.53941360183325	11.741	0.98571	11.741	11.048	12.034	0					83	31	4	0	0	0	0.97491	1	4666	4666		2.4348	0	1	13392000	+		5404	15123	2671	2687	6673	6673					-0.01541300058465822
FKEKCAANR	9	Unmodified	_FKEKCAANR_					0	0	0			REV__nc|ENSG00000178234|Q8NCW6-2|GALNT11	REV__nc|ENSG00000178234|Q8NCW6-2|GALNT11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1915161013603	2	533.776751	1065.53895	1.0444	0.00055747	-3.436	-0.0018341	-2.3916	-0.0012766	533.7748817708126	29.784	0.21497	31.583	31.506	31.721	1.7987					9	6	2	0	0	0	0.11851	1	12515	12515		3.9444	0	1	538000	+		5405	11242	2672	2688	6674	6674					0.008800346599173281
FKEPPVYC	8	Unmodified	_FKEPPVYC_					0	0	0			REV__ENST00000427177.5_1_17:75496571-75496619:+|nuORF	REV__ENST00000427177.5_1_17:75496571-75496619:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1610290408134	3	328.161606	981.462989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.342	1	29.342	28.842	29.842	0								0	0	0	1.0178	1	12283	12283		0.45834	0	1		+		5406	13004	2673	2689	6675	6675					-0.02848362240217739
FKFIQIII	8	Unmodified	_FKFIQIII_					0	0	0			REV__tr|A0A7D6ZRN0|A0A7D6ZRN0_9CLOTDUF1700domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04330PE=4SV=1	REV__tr|A0A7D6ZRN0|A0A7D6ZRN0_9CLOTDUF1700domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04330PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3299133181572	2	511.325871	1020.63719	2.2048	0.0011274	0.6594	0.00033717	2.8642	0.0014646	511.32624775614283	81.37	0.76203	81.661	81.338	82.1	0.29056					80	24	5	0	0	0	0.89176	1	34155	34155		0.79363	0	1	201660000	+		5407	15692	2674	2690	6676	6676					0.12769586247441111
FKIDPLHL	8	Unmodified	_FKIDPLHL_					0	0	0			REV__ENSG00000137492|ENST00000260045|THAP12	REV__ENSG00000137492|ENST00000260045|THAP12	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1956054568291	3	328.195527	981.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.86	1	28.131	27.631	28.631	0.27119								0	0	0	1.0178	1	11652	11652		1.8442	0	1		+		5408	10021	2675	2691	6677	6677					0.07323252173853234
FKIDPLHL	8	Unmodified	_FKIDPLHL_					0	0	0			REV__ENSG00000137492|ENST00000260045|THAP12	REV__ENSG00000137492|ENST00000260045|THAP12	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1951171755791	3	328.195527	981.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.825	1	28.096	27.596	28.596	1.2715								0	0	0	1.0178	1	11234	11234		1.8442	0	1		+		5409	10021	2675	2691	6678	6678					0.07323252173853234
FKIYVKGF	8	Unmodified	_FKIYVKGF_					0	0	0		tr|A0A553SQD7|A0A553SQD7_NIACItRNA-dihydrouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_24895PE=3SV=1	tr|A0A553SQD7|A0A553SQD7_NIACItRNA-dihydrouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_24895PE=3SV=1	tr|A0A553SQD7|A0A553SQD7_NIACItRNA-dihydrouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_24895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2949096560478	2	501.294571	1000.57459	1.7325	0.00086851	0.71796	0.00035991	2.4505	0.0012284	501.29457165450225	64.683	0.75783	66.611	66.045	66.803	1.928					41	23	3	0	0	0	0.87803	1	27178	27178		10.183	0.83596	1	3333800			5410	16514	2676	2692	6679	6679					0.07432440179240984
FKKKAVKRL	9	Unmodified	_FKKKAVKRL_					0	0	0			REV__ENSG00000138796|ENST00000309522|HADH	REV__ENSG00000138796|ENST00000309522|HADH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1117.761279284954	1	1117.75681	1116.74953	3.2106	0.0035886	-1.6639	-0.0018598	1.5467	0.0017288	1117.7551049264569	108.09	0.086411	108.25	108.18	108.27	0.15796					20	10	2	0	0	0	0.85019	1	46568	46568		0.52476	0.52476	1	56040000	+		5411	10084	2677	2693	6680	6680					0.19582860044260997
FKKKAVKRL	9	Unmodified	_FKKKAVKRL_					0	0	0			REV__ENSG00000138796|ENST00000309522|HADH	REV__ENSG00000138796|ENST00000309522|HADH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1117.75681	1116.74953	2.7822	0.0031098	-1.5075	-0.0016851	1.2746	0.0014247	1117.7552381017408	108.1	0.099777	108.26	108.2	108.3	0.15781	0.0065763	0.00013521	NaN	0.52476	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82842000	+		5412	10084	2677	2693							0.19582860044260997
FKKKAVKRL	9	Unmodified	_FKKKAVKRL_					0	0	0			REV__ENSG00000138796|ENST00000309522|HADH	REV__ENSG00000138796|ENST00000309522|HADH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1117.75681	1116.74953	3.2106	0.0035886	-1.6639	-0.0018598	1.5467	0.0017288	1117.7551049264569	108.09	0.086411	108.25	108.18	108.27	0.15796	-0.0065763	-3.9553E-05	NaN	0.52476	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56040000	+		5413	10084	2677	2693							0.19582860044260997
FKKRRRRARKY	11	Unmodified	_FKKRRRRARKY_					0	0	0		nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2;nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	MSMS	GG20161007_CRH_Patient100_W632_01	3	782.9294921755791	2	782.992209	1563.96987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.999	1	86.158	85.658	86.658	1.159								0	0	0	0.63775	1	35668	35668		0	0	1				5414	4235	2678	2694	6681	6681					0.21043898424409235
FKKRRRRARKY	11	Unmodified	_FKKRRRRARKY_					0	0	0		nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2;nc|ENSG00000172403|Q9UMS6-5|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	782.9943115115166	2	782.992209	1563.96987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.704	1	93.981	93.481	94.481	1.277								0	0	0	0.63775	1	39015	39015		0	0	1				5415	4235	2678	2694	6682	6682					0.21043898424409235
FKNRKKRYKKK	11	Unmodified	_FKNRKKRYKKK_					0	0	0		ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5132629275322	4	381.746585	1522.95723	-0.68163	-0.00026021	1.4453	0.00055174	0.76368	0.00029153	381.7472207074574	32.384	0.21665	32.384	32.257	32.473	0					8	6	2	0	0	0	0.14606	1	13570	13570		0.45452	0	1	382660			5416	3876	2679	2695	6683	6683					0.21667442241482604
FKNVVKRRLFR	11	Unmodified	_FKNVVKRRLFR_					0	0	0			REV__ENSG00000077063|ENST00000160373|CTTNBP2	REV__ENSG00000077063|ENST00000160373|CTTNBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	366.4814636111259	4	366.483394	1461.90447	-1.085	-0.00039763	-2.2994	-0.00084271	-3.3844	-0.0012403	366.48217408886234	33.251	0.8576	33.251	32.688	33.546	0					46	28	3	0	0	0	1.039	1	13889	13889		0.45452	0	1	1182100	+		5417	8774	2680	2696	6684	6684					0.191994841786709
FKRAPKLRVVK	11	Unmodified	_FKRAPKLRVVK_					0	0	0			REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	671.4442626833916	2	671.445706	1340.87686	1.4692	0.00098648	-1.0956	-0.00073566	0.37354	0.00025081	671.4438281425944	105.92	0.095558	105.92	105.88	105.97	0					12	4	3	0	0	0	1.0131	1	45086	45086		2.9952	1.8019	1	41728000	+		5418	13409	2681	2697	6685	6685					0.22005580918448686
FKRAPKLRVVK	11	Unmodified	_FKRAPKLRVVK_					0	0	0			REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	671.4462768435478	2	671.445706	1340.87686	2.679	0.0017988	-0.84057	-0.0005644	1.8385	0.0012344	671.4449407306006	105.88	0.12132	105.93	105.88	106	0.05455					14	5	3	0	0	0	1.0131	1	44991	44991		2.9952	1.3426	1	62556000	+		5419	13409	2681	2697	6686	6686					0.22005580918448686
FKRAPKLRVVK	11	Unmodified	_FKRAPKLRVVK_					0	0	0			REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	671.4473144412041	2	671.445706	1340.87686	2.9181	0.0019593	-1.8254	-0.0012257	1.0927	0.00073368	671.4443373813417	105.87	0.19106	106.03	105.91	106.1	0.15859					30	9	5	0	0	0	1.0131	1	45170	45170		2.9952	1.3426	1	370160000	+		5420	13409	2681	2697	6687	6687					0.22005580918448686
FKRAPKLRVVK	11	Unmodified	_FKRAPKLRVVK_					0	0	0			REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	REV__ENST00000488281.1_1_14:47669981-47670080:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	671.4456664919853	2	671.445706	1340.87686	2.9181	0.0019593	-2.7168	-0.0018242	0.20133	0.00013518	671.4438429785494	107.28	0.20384	107.44	107.34	107.54	0.15781					39	10	5	0	0	0	1.0395	1	46147	46147		0.30703	0.30703	1	524080000	+		5421	13409	2681	2697	6688	6688					0.22005580918448686
FKRFLIIFQ	9	Unmodified	_FKRFLIIFQ_					0	0	0		ENST00000463724.1_1_1:74648194-74648635:-|nuORF	ENST00000463724.1_1_1:74648194-74648635:-|nuORF	ENST00000463724.1_1_1:74648194-74648635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3710204958916	2	606.368601	1210.72265	2.5478	0.0015449	0.86522	0.00052464	3.413	0.0020695	606.3692547590385	91.759	0.42077	91.949	91.723	92.144	0.19042					29	12	3	0	0	0	0.85019	1	38441	38441		0.52476	0	1	1543200			5422	6687	2682	2698	6689	6689					0.12571751433074496
FKRKIPWINIY	11	Unmodified	_FKRKIPWINIY_					0	0	0		ENSG00000156395|ENST00000369701|SORCS3	ENSG00000156395|ENST00000369701|SORCS3	ENSG00000156395|ENST00000369701|SORCS3	MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2949706912041	3	493.294123	1476.86054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.326	1	93.494	92.994	93.994	0.16835								0	0	0	0.63775	1	39071	39071		0.08335	0.010087	1				5423	3448	2683	2699	6690	6690					0.14118454961726457
FKRKRKKERRM	11	Unmodified	_FKRKRKKERRM_					0	0	0			REV__ENST00000504131.6_1_4:170641157-170641199:+|nuORF	REV__ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.8065673708916	3	521.656061	1561.94635	1.81	0.0009442	1.3783	0.000719	3.1883	0.0016632	521.6568490886598	43.19	0.35921	44.544	44.376	44.735	1.3536					17	11	2	0	0	0	0.14606	1	18133	18133		0.40827	0.32491	1	2033700	+		5424	13523	2684	2700	6691	6691					0.18785716595562008
FKRKRKKERRM	11	Unmodified	_FKRKRKKERRM_					0	0	0			REV__ENST00000504131.6_1_4:170641157-170641199:+|nuORF	REV__ENST00000504131.6_1_4:170641157-170641199:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	521.656061	1561.94635	1.9416	0.0010128	2.0766	0.0010833	4.0182	0.0020961	521.6566613987391	44.174	1.018	44.5	44.027	45.045	0.32674	-0.021857	0.00052235	NaN	0.40827	90	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5238100	+		5425	13523	2684	2700							0.18785716595562008
FKRRKRKEQSL	11	Unmodified	_FKRRKRKEQSL_					0	0	0		ENST00000530199.5_1_11:22848844-22850840:-|nuORF	ENST00000530199.5_1_11:22848844-22850840:-|nuORF	ENST00000530199.5_1_11:22848844-22850840:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	493.4012939333916	3	492.635431	1474.88446	3.2452	0.0015987	-2.7831	-0.001371	0.46214	0.00022767	492.63403422925273	85.686	0.49635	85.938	85.726	86.222	0.25227					23	15	2	0	0	0	0.14606	1	35800	35800		0.094841	0.094841	1	540400			5426	7163	2685	2701	6692	6692					0.16601688448099594
FKRWDVHN	8	Unmodified	_FKRWDVHN_					0	0	0		tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	368.2729369997978	3	367.857797	1100.55156	-0.11656	-4.2878E-05	2.1569	0.00079343	2.0403	0.00075056	367.85823754324406	83.981	0.4305	83.981	83.721	84.151	0					31	13	3	0	0	0	2.3239	1	34895	34895		0.40072	0	1	4170300			5427	16662	2686	2702	6693	6693					0.005308141144723777
FKYFVKVY	8	Unmodified	_FKYFVKVY_					0	0	0			REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2084228396416	3	365.207544	1092.6008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.93	1	108.08	107.58	108.58	0.15795								0	0	0	1.0178	1	46498	46498		0.40072	0	1		+		5428	11658	2687	2703	6694	6694					0.058207093507235186
FKYRFKKDGQR	11	Unmodified	_FKYRFKKDGQR_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MSMS	GG20161007_CRH_Patient100_W632_02	4	737.3738891482353	2	736.909685	1471.80482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.171	1	98.428	97.928	98.928	0.25636								0	0	0	0.63775	1	41307	41307		2.9952	0.26005	1				5429	2624	2688	2704	6695	6695					0.08778621774058593
FLAALALYLL	10	Unmodified	_FLAALALYLL_					0	0	0		ENSG00000110628|ENST00000649076|SLC22A18	ENSG00000110628|ENST00000649076|SLC22A18	ENSG00000110628|ENST00000649076|SLC22A18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3484985232353	2	554.344261	1106.67397	3.128	0.001734	3.4253	0.0018988	6.5533	0.0036328	554.3462127884911	74.555	0.67407	75.861	75.669	76.343	1.3063					36	21	2	0	0	0	0.56346	1	31297	31297		24.674	2.9272	1	1409400			5430	1708	2689	2705	6696	6696					0.12489838073315696
FLAASRFLF	9	Unmodified	_FLAASRFLF_					0	0	0			REV__ENST00000556029.5_2_12:98909466-98909595:+|nuORF	REV__ENST00000556029.5_2_12:98909466-98909595:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3047363162041	2	536.302927	1070.5913	3.6074	0.0019347	-0.12978	-6.9599E-05	3.4776	0.0018651	536.3029081834668	74.008	0.65334	75.326	74.998	75.651	1.318					55	20	4	0	0	0	0.046715	1	31071	31071		68.081	19.735	1	10845000	+		5431	13809	2690	2706	6697	6697					0.05882941065169689
FLAASRFLF	9	Unmodified	_FLAASRFLF_					0	0	0			REV__ENST00000556029.5_2_12:98909466-98909595:+|nuORF	REV__ENST00000556029.5_2_12:98909466-98909595:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3041259646416	2	536.302927	1070.5913	2.875	0.0015419	-0.19424	-0.00010417	2.6807	0.0014377	536.302892791216	73.442	0.59236	75.238	74.911	75.503	1.7962					54	18	4	0	0	0	0.066197	1	30797	30797		78.149	20.678	1	12259000	+		5432	13809	2690	2706	6698	6698					0.05882941065169689
FLADAKWIL	9	Unmodified	_FLADAKWIL_					0	0	0		ENST00000468376.2_1_20:45867286-45947776:-|nuORF;ZMYND8-EYA2|1|fusion;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;ZMYND8-EYA2|3|fusion;ZMYND8-EYA2|2|fusion;ZMYND8-EYA2|4|fusion;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;ZMYND8-EYA2|5|fusion;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;ZMYND8-EYA2|7|fusion;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;ZMYND8-EYA2|6|fusion;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;ZMYND8-EYA2|8|fusion	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8094360232353	2	538.810585	1075.60662	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.026	1	72.026	71.526	72.526	0								0	0	0	0.072403	1	29993	29993		39.95	3.9055	1				5433	6718	2691	2707	6699	6699					0.07183807862361391
FLADAKWIL	9	Unmodified	_FLADAKWIL_					0	0	0		ENST00000468376.2_1_20:45867286-45947776:-|nuORF;ZMYND8-EYA2|1|fusion;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;ZMYND8-EYA2|3|fusion;ZMYND8-EYA2|2|fusion;ZMYND8-EYA2|4|fusion;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;ZMYND8-EYA2|5|fusion;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;ZMYND8-EYA2|7|fusion;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;ZMYND8-EYA2|6|fusion;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;ZMYND8-EYA2|8|fusion	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8155395388603	2	538.810585	1075.60662	2.8758	0.0015495	-2.1709	-0.0011697	0.70488	0.00037979	538.809766045106	69.689	0.37817	71.536	71.35	71.729	1.8474					18	11	2	0	0	0	0.057024	1	29212	29212		65.235	14.38	1	6950800			5434	6718	2691	2707	6700	6700					0.07183807862361391
FLADAKWIL	9	Unmodified	_FLADAKWIL_					0	0	0		ENST00000468376.2_1_20:45867286-45947776:-|nuORF;ZMYND8-EYA2|1|fusion;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;ZMYND8-EYA2|3|fusion;ZMYND8-EYA2|2|fusion;ZMYND8-EYA2|4|fusion;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;ZMYND8-EYA2|5|fusion;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;ZMYND8-EYA2|7|fusion;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;ZMYND8-EYA2|6|fusion;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;ZMYND8-EYA2|8|fusion	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	538.810585	1075.60662	3.0546	0.0016459	-2.4412	-0.0013154	0.6134	0.00033051	538.8092496498635	70.246	0.37785	71.6	71.397	71.775	1.3536	0.031984	-0.00016537	NaN	65.235	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7083900			5435	6718	2691	2707							0.07183807862361391
FLADDLGGL	9	Unmodified	_FLADDLGGL_					0	0	0		ENST00000466409.1_1_9:95874378-95875386:+|nuORF;ENST00000468781.5_1_9:95858594-95875386:+|nuORF;ENSG00000165233|ENST00000375464|CARD19	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	920.4774658083916	1	920.472374	919.465098	1.7891	0.0016468	1.8819	0.0017323	3.671	0.0033791	920.4737076358418	67.498	0.28111	67.82	67.683	67.964	0.32269					13	8	2	0	0	0	0.10722	1	28254	28254		46.921	6.4723	1	850750			5436	3823	2692	2708	6701	6701					0.002143897692462815
FLADDLGGL	9	Unmodified	_FLADDLGGL_					0	0	0		ENST00000466409.1_1_9:95874378-95875386:+|nuORF;ENST00000468781.5_1_9:95858594-95875386:+|nuORF;ENSG00000165233|ENST00000375464|CARD19	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.4742309451103	1	920.472374	919.465098	1.8922	0.0017417	0.67738	0.00062351	2.5696	0.0023652	920.4727437657934	66.378	0.36974	67.767	67.596	67.966	1.3888					27	11	3	0	0	0	0.0024698	2	27829	27829;27878		129.2	51.216	1	4501700			5437	3823	2692	2708	6702;6703	6702					0.002143897692462815
FLADDLGGL	9	Unmodified	_FLADDLGGL_					0	0	0		ENST00000466409.1_1_9:95874378-95875386:+|nuORF;ENST00000468781.5_1_9:95858594-95875386:+|nuORF;ENSG00000165233|ENST00000375464|CARD19	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.4750854372978	1	920.472374	919.465098	1.7591	0.0016192	-0.017999	-1.6567E-05	1.7411	0.0016026	920.4725586745813	65.967	0.40088	67.875	67.706	68.107	1.9085					22	12	2	0	0	0	0.010702	2	27660	27660;27704		106.85	30.321	1	3757700			5438	3823	2692	2708	6704;6705	6704					0.002143897692462815
FLADDLGGL	9	Unmodified	_FLADDLGGL_					0	0	0		ENST00000466409.1_1_9:95874378-95875386:+|nuORF;ENST00000468781.5_1_9:95858594-95875386:+|nuORF;ENSG00000165233|ENST00000375464|CARD19	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	ENST00000466409.1_1_9:95874378-95875386:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	920.472374	919.465098	1.5654	0.0014409	-0.26055	-0.00023983	1.3049	0.0012011	920.473167723634	67.825	0.31676	67.825	67.695	68.012	0	0.002869	-0.00071178	NaN	129.2	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	600200			5439	3823	2692	2708							0.002143897692462815
FLADIVQKL	9	Unmodified	_FLADIVQKL_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant;SACS|p.L2402Tfs*7|1|0.04|ENSG00000151835|chr13:23336672-23336673|-/T|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.7767211794853	2	523.815867	1045.61718	2.322	0.0012163	1.7555	0.00091957	4.0776	0.0021359	523.8188140818061	63.584	0.30464	64.997	64.876	65.18	1.4134					16	9	2	0	0	0	0.086272	1	26712	26712		30.637	8.8899	1	1321500			5440	3303	2693	2709	6706	6706					0.0961979051680828
FLADIVQKL	9	Unmodified	_FLADIVQKL_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant;SACS|p.L2402Tfs*7|1|0.04|ENSG00000151835|chr13:23336672-23336673|-/T|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8171874880791	2	523.815867	1045.61718	2.2045	0.0011547	1.3926	0.00072947	3.5971	0.0018842	523.8178110676877	63.026	0.27689	64.971	64.845	65.121	1.9444					18	8	3	0	0	0	0.098163	1	26438	26438		49.933	9.9757	1	1018800			5441	3303	2693	2709	6707	6707					0.0961979051680828
FLADPSAFVAA	11	Unmodified	_FLADPSAFVAA_					0	0	0		nc|ENSG00000089157|P05388-2|RPLP0;nc|ENSG00000213553|Q8NHW5|RPLP0P6;ENSG00000089157|ENST00000392514|RPLP0;ENST00000496593.5_1_11:61404148-61405105:+|nuORF	nc|ENSG00000089157|P05388-2|RPLP0	nc|ENSG00000089157|P05388-2|RPLP0	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7883178591728	2	554.787307	1107.56006	1.349	0.00074838	0.45149	0.00025048	1.8004	0.00099886	554.787091798948	66.743	0.24052	68.632	68.557	68.797	1.8889					12	7	2	0	0	0	0.54522	1	28005	28005		22.736	11.096	1	2043000			5442	1121	2694	2710	6708	6708					0.010583232404542287
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.7841064333916	2	546.782222	1091.54989	1.7891	0.00097825	-0.57177	-0.00031263	1.2173	0.00066561	546.7820289909706	60.031	0.26852	60.031	59.856	60.124	0					14	8	2	0	0	0	0.28892	1	25064	25064		39.957	15.937	1	2145400			5443	5149	2695	2711	6709	6709					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.7819091677666	2	546.782222	1091.54989	2.3515	0.0012857	-0.5339	-0.00029193	1.8176	0.00099381	546.7819172203064	59.559	0.31509	59.885	59.743	60.058	0.32553					21	9	3	0	0	0	0.32206	2	24990	24940;24990		37.974	13.953	1	2162500			5444	5149	2695	2711	6710;6711	6711					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1092.558764636517	1	1092.55717	1091.54989	0.76813	0.00083923	-0.7852	-0.00085788	-0.017074	-1.8654E-05	1092.5593319353418	58.574	0.19008	59.992	59.845	60.035	1.4181					8	5	2	0	0	0	0.41677	1	24554	24554		32.305	11.852	1	634200			5445	5149	2695	2711	6712	6712					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7814819216728	2	546.782222	1091.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.458	1	59.876	59.376	60.376	1.4181								0	0	0	0.0074123	1	24510	24510		58.679	31.795	1				5446	5149	2695	2711	6713	6713					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7826415896416	2	546.782222	1091.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.572	1	59.99	59.49	60.49	1.4181								0	0	0	0.0013081	1	24557	24557		71.922	33.948	1				5447	5149	2695	2711	6714	6714					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7845336794853	2	546.782222	1091.54989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.677	1	60.095	59.595	60.595	1.4181								0	0	0	0.16284	1	24600	24600		39.957	20.7	1				5448	5149	2695	2711	6715	6715					0.007777155151643456
FLAEDALNTV	10	Unmodified	_FLAEDALNTV_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;ENST00000484556.1_1_6:30866836-30867070:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7827026247978	2	546.782222	1091.54989	0.91889	0.00050244	0.36137	0.00019759	1.2803	0.00070002	546.7823583643046	58.08	0.40424	60.049	59.842	60.247	1.969					34	12	4	0	0	0	0.043055	3	24362	24315;24362;24405		81.89	34.142	1	23908000			5449	5149	2695	2711	6716;6717;6718	6717					0.007777155151643456
FLAEEGFYKF	10	Unmodified	_FLAEEGFYKF_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	625.8096191287041	2	625.808239	1249.60193	2.5152	0.0015741	-0.18218	-0.00011401	2.3331	0.00146	625.8080029477334	61.711	0.31668	61.711	61.582	61.899	0					23	9	3	0	0	0	0.31869	1	25718	25718		38.176	10.002	1	1571300			5450	2642	2696	2712	6719	6719					-0.012891210710677115
FLAEEGFYKF	10	Unmodified	_FLAEEGFYKF_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	625.8105346560478	2	625.808239	1249.60193	1.9891	0.0012448	0.75068	0.00046978	2.7398	0.0017146	625.8087926708333	61.134	0.34263	61.464	61.267	61.61	0.32974					25	10	3	0	0	0	0.25725	2	25637	25593;25637		41.956	17.304	1	1860500			5451	2642	2696	2712	6720;6721	6721					-0.012891210710677115
FLAEHPNVTL	10	Unmodified	_FLAEHPNVTL_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.8049194216728	2	570.806031	1139.59751	1.6206	0.00092507	0.41519	0.000237	2.0358	0.0011621	570.8062515453021	44.488	0.30745	44.488	44.349	44.656	0					19	9	3	0	0	0	0.55653	1	18598	18598		24.991	6.856	1	1379400			5452	2367;5357	2697	2713	6722	6722					0.0332941450603812
FLAEHPNVTL	10	Unmodified	_FLAEHPNVTL_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.8080322146416	2	570.806031	1139.59751	1.6606	0.00094789	-0.32792	-0.00018718	1.3327	0.00076071	570.8060431466384	43.896	0.28199	44.22	44.024	44.306	0.32389					17	8	3	0	0	0	0.45795	2	18403	18403;18452		29.841	9.387	1	1344100			5453	2367;5357	2697	2713	6723;6724	6723					0.0332941450603812
FLAEHPNVTL	10	Unmodified	_FLAEHPNVTL_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8071166872978	2	570.806031	1139.59751	1.8346	0.0010472	0.28101	0.0001604	2.1156	0.0012076	570.8060204540697	42.473	0.31837	43.813	43.634	43.953	1.3399					17	9	2	0	0	0	0.050585	2	17782	17782;17838		87.258	43.4	1	4148500			5454	2367;5357	2697	2713	6725;6726	6725					0.0332941450603812
FLAEHPNVTL	10	Unmodified	_FLAEHPNVTL_					0	0	0		ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F;ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8069335818291	2	570.806031	1139.59751	1.7659	0.001008	-0.25933	-0.00014803	1.5066	0.00085995	570.8057176060528	41.927	0.28206	43.848	43.698	43.98	1.9211					15	8	2	0	0	0	0.045734	2	17587	17538;17587		80.676	30.743	1	3866600			5455	2367;5357	2697	2713	6727;6728	6728					0.0332941450603812
FLAEVPRTL	9	Unmodified	_FLAEVPRTL_					0	0	0			REV__ENSG00000142327|ENST00000270357|RNPEPL1	REV__ENSG00000142327|ENST00000270357|RNPEPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.7482787966728	2	523.305667	1044.59678	2.0252	0.0010598	-2.9603	-0.0015491	-0.9351	-0.00048934	523.3040720829765	66.45	1.2573	67.838	67.299	68.557	1.3888					66	40	3	0	0	0	0.116	1	27805	27805		9.3474	0	1	1025000	+		5456	10176	2698	2714	6729	6729					0.0762661985700106
FLAGWGTFI	9	Unmodified	_FLAGWGTFI_					0	0	0			REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2688476443291	2	506.268553	1010.52255	3.2876	0.0016644	-2.5336	-0.0012827	0.75404	0.00038175	506.2674572802957	81.001	0.33777	82.234	82.07	82.408	1.2332					20	10	3	0	0	0	0.1735	1	34003	34003		36.044	1.8569	1	1462800	+		5457	13223	2699	2715	6730	6730					0.017712767654757045
FLAGWGTFI	9	Unmodified	_FLAGWGTFI_					0	0	0			REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	506.268553	1010.52255	2.3177	0.0011734	-4.3534	-0.002204	-2.0358	-0.0010306	506.2660326927988	82.551	0.21681	82.551	82.368	82.585	0	0.19897	-0.00083601	NaN	36.044	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378540	+		5458	13223	2699	2715							0.017712767654757045
FLAGWGTFI	9	Unmodified	_FLAGWGTFI_					0	0	0			REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	506.268553	1010.52255	3.2876	0.0016644	-2.5336	-0.0012827	0.75404	0.00038175	506.2674572802957	81.001	0.33777	82.234	82.07	82.408	1.2332	-0.11748	0.0010067	NaN	36.044	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1462800	+		5459	13223	2699	2715							0.017712767654757045
FLAGWGTFI	9	Unmodified	_FLAGWGTFI_					0	0	0			REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	REV__ENST00000464356.6_2_1:156437035-156437317:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	506.268553	1010.52255	1.7957	0.00090909	-2.699	-0.0013664	-0.90334	-0.00045733	506.2678758940946	80.554	0.36544	82.27	82.111	82.477	1.7167	-0.081486	0.00083917	NaN	36.044	19	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1272500	+		5460	13223	2699	2715							0.017712767654757045
FLAHFTYL	8	Unmodified	_FLAHFTYL_					0	0	0			REV__ENSG00000141569|ENST00000269383|TRIM65	REV__ENSG00000141569|ENST00000269383|TRIM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2705871462822	2	506.268553	1010.52255	3.2876	0.0016644	-2.5336	-0.0012827	0.75404	0.00038175	506.2674572802957	81.001	0.33777	82.234	82.07	82.408	1.2332					20	10	3	0	0	0	0.82039	1	34058	34058		19.439	1.304	1	1462800	+		5461	10159	2700	2716	6731	6731					0.01771276765452967
FLAHFTYL	8	Unmodified	_FLAHFTYL_					0	0	0			REV__ENSG00000141569|ENST00000269383|TRIM65	REV__ENSG00000141569|ENST00000269383|TRIM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2664062380791	2	506.268553	1010.52255	1.7957	0.00090909	-2.699	-0.0013664	-0.90334	-0.00045733	506.2678758940946	80.554	0.36544	82.27	82.111	82.477	1.7167					19	11	3	0	0	0	0.56817	2	33783	33783;33833		42.968	6.9238	1	1272500	+		5462	10159	2700	2716	6732;6733	6732					0.01771276765452967
FLAHLDTATDF	11	Unmodified	_FLAHLDTATDF_					0	0	0		tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.8052245974541	2	625.806228	1249.5979	2.2221	0.0013906	-3.1387	-0.0019642	-0.91662	-0.00057363	625.8039601868846	59.512	0.29598	61.481	61.286	61.582	1.969					23	9	3	0	0	0	0.24984	2	24976	24929;24976		36.127	8.4982	1	5666600			5463	16049	2701	2717	6734;6735	6735					-0.01691210564786161
FLAILPEEL	9	Unmodified	_FLAILPEEL_					0	0	0		nc|ENSG00000186814|Q86W11-3|ZSCAN30;ENSG00000186814|ENST00000333206|ZSCAN30	nc|ENSG00000186814|Q86W11-3|ZSCAN30	nc|ENSG00000186814|Q86W11-3|ZSCAN30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.8047973513603	2	522.802426	1043.5903	2.4322	0.0012716	0.096216	5.0302E-05	2.5285	0.0013219	522.8023556075883	90.828	0.3171	90.828	90.682	90.999	0					17	9	2	0	0	0	0.51832	1	38023	38023		14.582	1.0738	1	1379000			5464	4805	2702	2718	6736	6736					0.07024681905613761
FLAIPSLI	8	Unmodified	_FLAIPSLI_					0	0	0			REV__tr|A0A7D6W0F6|A0A7D6W0F6_9CLOTUbiAfamilyprenyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23545PE=3SV=1	REV__tr|A0A7D6W0F6|A0A7D6W0F6_9CLOTUbiAfamilyprenyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	873.5524780154228	1	873.544417	872.537141	4.5698	0.0039919	-0.13734	-0.00011997	4.4324	0.0038719	873.5449973222129	90.12	0.2207	91.14	90.99	91.211	1.0199					9	6	2	0	0	0	0.42763	1	37970	37970		52.693	0	1	530050	+		5465	15579	2703	2719	6737	6737					0.09577348913614969
FLAKLIAQA	9	Unmodified	_FLAKLIAQA_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000484403.5_1_21:30439206-30445917:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.8059570193291	2	487.805303	973.596052	2.6105	0.0012734	0.27427	0.00013379	2.8847	0.0014072	487.80689198426	44.548	0.35025	45.913	45.706	46.056	1.3653					17	10	2	0	0	0	0.24063	1	18685	18685		28.487	9.0478	1	447980			5466	3442	2704	2720	6738	6738					0.10819825207954636
FLAKRRRE	8	Unmodified	_FLAKRRRE_					0	0	0			REV__INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	REV__INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3289672732353	2	538.327799	1074.64105	2.6684	0.0014365	-0.82251	-0.00044278	1.8459	0.00099372	538.3262751713155	85.3	0.47445	86.459	86.21	86.685	1.159					50	17	5	0	0	0	0.8873	1	35739	35739		6.3541	0	1	53715000	+		5467	14235	2705	2721	6739	6739					0.10671068793840277
FLALLAGAHA	10	Unmodified	_FLALLAGAHA_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2881347537041	2	492.287277	982.560001	1.5797	0.00077765	0.55852	0.00027495	2.1382	0.0010526	492.2870463737299	54.946	0.31639	56.35	56.182	56.499	1.4048					18	10	2	0	0	0	0.12362	1	23006	23006		59.795	31.308	1	1672800			5468	1312	2706	2722	6740	6740					0.06802368031083006
FLAMKKLI	8	Unmodified	_FLAMKKLI_					0	0	0			REV__ENST00000217515.10_2_18:54281656-54281722:-|nuORF	REV__ENST00000217515.10_2_18:54281656-54281722:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3087341189384	2	482.306624	962.598695	2.2116	0.0010667	1.8903	0.00091169	4.1019	0.0019784	482.30756438236	70.835	0.44267	71.158	70.893	71.336	0.32359					22	13	2	0	0	0	0.89176	1	29608	29608		0.79363	0	1	1230000	+		5469	12074	2707	2723	6741	6741					0.115899573412662
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	989.5461913943291	1	989.54548	988.538203	2.1333	0.002111	-0.83019	-0.00082151	1.3031	0.0012895	989.5450876645971	82.554	0.33876	82.554	82.308	82.646	0					19	10	2	0	0	0	0.10722	1	34379	34379		46.921	6.4723	1	1470800			5470	2773	2708	2724	6742	6742					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2765685915947	2	495.276378	988.538203	1.8068	0.00089489	-0.30671	-0.0001519	1.5001	0.00074299	495.2759311731131	82.553	0.33984	82.553	82.337	82.677	0					24	10	3	0	0	0	0.098957	1	34406	34406		49.669	21.496	1	3766200			5471	2773	2708	2724	6743	6743					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	989.5452758669853	1	989.54548	988.538203	2.2826	0.0022587	-0.34915	-0.0003455	1.9334	0.0019132	989.5450659824298	82.04	0.39996	82.321	82.059	82.459	0.2802					23	12	2	0	0	0	0.078975	2	34312	34264;34312		56.541	6.8724	1	2013500			5472	2773	2708	2724	6744;6745	6745					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	989.5477783083916	1	989.54548	988.538203	4.4262	0.00438	-0.88473	-0.00087548	3.5415	0.0035045	989.543578516997	81.035	0.61376	82.269	82.012	82.626	1.2332					42	19	3	0	0	0	0.020661	2	34024	33974;34024		98.807	39.012	1	7640300			5473	2773	2708	2724	6746;6747	6747					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2787658572197	2	495.276378	988.538203	2.9908	0.0014813	3.2625	0.0016159	6.2533	0.0030971	495.2786113266166	80.977	0.76545	82.21	81.953	82.718	1.2332					50	24	3	0	0	0	0.070759	2	34012	34012;34069		59.795	16.827	1	15966000			5474	2773	2708	2724	6748;6749	6748					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	989.5456420779228	1	989.54548	988.538203	2.292	0.0022681	0.22285	0.00022052	2.5149	0.0024886	989.5441582075431	80.564	0.42146	82.278	82.022	82.444	1.7143					29	13	3	0	0	0	0.037423	2	33815	33765;33815		78.445	18.65	1	6328500			5475	2773	2708	2724	6750;6751	6751					0.043475632825106914
FLAPWATIA	9	Unmodified	_FLAPWATIA_					0	0	0		ENSG00000137509|ENST00000313010|PRCP;nc|ENSG00000137509|P42785-2|PRCP	ENSG00000137509|ENST00000313010|PRCP	ENSG00000137509|ENST00000313010|PRCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2778198122978	2	495.276378	988.538203	1.876	0.00092916	3.775	0.0018697	5.6511	0.0027988	495.2785855100394	80.529	0.64406	82.246	82.08	82.724	1.7167					58	20	4	0	0	0	0.052478	2	33801	33801;33851		67.035	14.342	1	11469000			5476	2773	2708	2724	6752;6753	6752					0.043475632825106914
FLARYVSLPNQ	11	Unmodified	_FLARYVSLPNQ_					0	0	0		ENSG00000100439|ENST00000428304|ABHD4;ENST00000539344.1_1_14:23067215-23072668:+|nuORF;nc|ENSG00000100439|Q8TB40-2|ABHD4;ENST00000544562.5_1_14:23067206-23078652:+|nuORF	ENSG00000100439|ENST00000428304|ABHD4	ENSG00000100439|ENST00000428304|ABHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.3621093630791	2	654.358962	1306.70337	2.9352	0.0019207	3.5489	0.0023222	6.4841	0.0042429	654.3609079701613	59.81	0.33644	61.779	61.582	61.918	1.969					28	10	3	0	0	0	0.38904	2	25119	25071;25119		27.223	11.074	1	2540200			5477	1279	2709	2725	6754;6755	6755					0.06228750351533563
FLASESLIKQI	11	Unmodified	_FLASESLIKQI_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	624.8641845583916	2	624.863546	1247.71254	2.3878	0.0014921	-1.3479	-0.00084225	1.0399	0.00064982	624.8625696846277	59.991	0.36708	59.991	59.807	60.174	0					34	12	4	0	0	0	2.7625E-11	2	25017	24971;25017		214.05	106.95	1	9544900			5478	5077	2710	2726	6756;6757	6757					0.09859098917195297
FLASESLIKQI	11	Unmodified	_FLASESLIKQI_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	624.8642455935478	2	624.863546	1247.71254	2.2976	0.0014357	-1.4249	-0.00089035	0.87272	0.00054533	624.8626452890416	59.371	0.36047	59.697	59.54	59.901	0.32553					39	14	4	0	0	0	3.1052E-33	3	24882	24840;24882;24939		243.33	114.39	1	11883000			5479	5077	2710	2726	6758;6759;6760	6759					0.09859098917195297
FLASESLIKQI	11	Unmodified	_FLASESLIKQI_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.8633300662041	2	624.863546	1247.71254	0.37087	0.00023175	-0.042332	-2.6452E-05	0.32854	0.00020529	624.8632393091219	58.203	0.31229	59.621	59.44	59.752	1.4181					29	10	3	0	0	0	3.1052E-33	3	24392	24351;24392;24450		243.33	114.39	1	24991000			5480	5077	2710	2726	6761;6762;6763	6762					0.09859098917195297
FLASESLIKQI	11	Unmodified	_FLASESLIKQI_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8630859255791	2	624.863546	1247.71254	-0.19543	-0.00012212	0.50714	0.00031689	0.31171	0.00019478	624.8636499221808	57.625	0.37949	59.594	59.405	59.784	1.969					39	17	3	0	0	0	3.1052E-33	3	24182	24138;24182;24233		243.33	114.39	1	19613000			5481	5077	2710	2726	6764;6765;6766	6765					0.09859098917195297
FLASIEKRILI	11	Unmodified	_FLASIEKRILI_					0	0	0		tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.9114257693291	2	651.91083	1301.80711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.39	1	107.39	106.89	107.89	0								0	0	0	0.63775	1	46023	46023		2.7352	1.4057	1				5482	17037	2711	2727	6767	6767					0.16827657459180045
FLATIMGV	8	Unmodified	_FLATIMGV_					0	0	0		ENSG00000096092|ENST00000211314|TMEM14A	ENSG00000096092|ENST00000211314|TMEM14A	ENSG00000096092|ENST00000211314|TMEM14A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	851.4717285037041	1	851.469538	850.462261	1.7871	0.0015216	1.4844	0.0012639	3.2714	0.0027855	851.4714572304069	71.975	0.283	73.316	73.184	73.467	1.3415					13	8	2	0	0	0	0.52797	1	30208	30208		45.75	2.782	1	1077400			5483	1193	2712	2728	6768	6768					0.031048431107365104
FLATRNLLF	9	Unmodified	_FLATRNLLF_					0	0	0			REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	REV__nc|ENSG00000100796|Q6IN85-2|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8215820193291	2	547.821484	1093.62842	3.2454	0.0017779	-2.1055	-0.0011535	1.1399	0.00062445	547.8199851070839	98.88	0.097649	99.078	99.013	99.11	0.19767					11	3	4	0	0	0	0.1735	1	41628	41628		36.044	3.7387	1	4426700	+		5484	9006	2713	2729	6769	6769					0.08534612610924341
FLCALSPLGQL	11	Unmodified	_FLCALSPLGQL_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8173095583916	2	581.32046	1160.62637	1.696	0.00098591	3.5549	0.0020666	5.2509	0.0030525	581.325246512229	67.631	0.77205	69.501	69.238	70.01	1.87					51	24	3	0	0	0	0.84637	1	28479	28479		13.042	2.2185	1	4300100			5485	2965	2714	2730	6770	6770					0.052478158108442585
FLCSLFNVTL	10	Unmodified	_FLCSLFNVTL_					0	0	0		ENST00000328046.8_1_X:24005008-24005134:-|nuORF	ENST00000328046.8_1_X:24005008-24005134:-|nuORF	ENST00000328046.8_1_X:24005008-24005134:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8065063357353	2	578.807185	1155.59982	2.2053	0.0012765	-2.2161	-0.0012827	-0.010736	-6.2138E-06	578.8059816064052	41.211	0.34568	42.537	42.305	42.65	1.3254					29	10	3	0	0	0	0.086078	1	17286	17286		66.457	4.8548	1	6216800			5486	5876	2715	2731	6771	6771					0.02824126919495029
FLCVEGPLDRE	11	Unmodified	_FLCVEGPLDRE_					0	0	0		nc|ENSG00000197410|Q6V1P9-5|DCHS2;ENSG00000197410|ENST00000357232|DCHS2	nc|ENSG00000197410|Q6V1P9-5|DCHS2	nc|ENSG00000197410|Q6V1P9-5|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.5442687869072	3	426.544667	1276.61217	0.68017	0.00029012	-1.3105	-0.000559	-0.63037	-0.00026888	426.54415016529066	34.552	0.31039	34.552	34.37	34.68	0					20	9	3	0	0	0	0.79576	1	14447	14447		15.538	5.5222	1	1056000			5487	5003	2716	2732	6772	6772					-0.015068814081587334
FLCYLRECWFW	11	Unmodified	_FLCYLRECWFW_					0	0	0			REV__ENST00000448841.5_1_10:104573746-104573887:+|nuORF	REV__ENST00000448841.5_1_10:104573746-104573887:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	523.2738525271416	3	522.573792	1564.69955	2.2294	0.001165	3.3372	0.0017439	5.5666	0.002909	522.5758584400331	50.822	0.18982	50.822	50.755	50.944	0					6	5	2	0	0	0	0.14606	1	21219	21219		1.4551	1.3819	1	358000	+		5488	13117	2717	2733	6773	6773					-0.06021378738205385
FLDASRSSKL	10	Unmodified	_FLDASRSSKL_					0	0	0		nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9;ENSG00000086848|ENST00000616540|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3073608279228	2	562.308938	1122.60332	1.2509	0.00070338	-3.3344	-0.001875	-2.0836	-0.0011716	562.3068972491089	67.536	0.46371	67.536	67.231	67.695	0					35	14	3	0	0	0	0.70618	1	28108	28108		18.146	0	1	1025300			5489	1078	2718	2734	6774	6774					0.04692513017721467
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3008911013603	2	531.297507	1060.58046	5.7032	0.0030301	-0.46827	-0.00024879	5.2349	0.0027813	531.2970012833543	89.027	0.61371	90.083	89.723	90.337	1.0562					39	18	3	0	0	0	0.031324	1	37534	37534		85.357	27.885	1	3916900			5490	2166	2719	2735	6775	6775					0.05259493900257439
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1061.593554675579	1	1061.58774	1060.58046	6.3167	0.0067057	4.2481	0.0045097	10.565	0.011215	1061.590483018018	89.006	0.35321	90.062	89.886	90.239	1.0562					15	10	2	0	0	0	0.018723	1	37554	37554		100.37	18.758	1	4628500			5491	2166	2719	2735	6776	6776					0.05259493900257439
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3010742068291	2	531.297507	1060.58046	4.9119	0.0026097	1.2067	0.0006411	6.1185	0.0032508	531.2982051755399	88.682	0.41777	90.129	89.889	90.306	1.4467					28	12	3	0	0	0	0.022807	1	37374	37374		97.075	35.717	1	8115500			5492	2166	2719	2735	6777	6777					0.05259493900257439
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1061.58774	1060.58046	2.3451	0.0024895	2.779	0.0029501	5.124	0.0054396	1061.5932224767453	90.209	0.25556	90.209	90.032	90.288	0	0.10304	-0.0044698	NaN	100.37	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842750			5493	2166	2719	2735							0.05259493900257439
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1061.58774	1060.58046	3.2576	0.0034582	8.3297	0.0088427	11.587	0.012301	1061.5965098184085	89.824	0.09639	90.047	90	90.096	0.22359	-0.058376	0.0014228	NaN	100.37	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1280800			5494	2166	2719	2735							0.05259493900257439
FLDDVNLIL	9	Unmodified	_FLDDVNLIL_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;ENST00000468167.5_1_X:70643008-70674023:+|nuORF;nc|ENSG00000147133|P21675-18|TAF1;nc|ENSG00000147133|P21675-17|TAF1;nc|ENSG00000147133|P21675|TAF1;ENSG00000147133|ENST00000423759|TAF1;nc|ENSG00000147133|P21675-1|TAF1;nc|ENSG00000147133|P21675-22|TAF1;nc|ENSG00000147133|P21675-13|TAF1;nc|ENSG00000147133|P21675-16|TAF1;nc|ENSG00000147133|P21675-20|TAF1;nc|ENSG00000147133|P21675-19|TAF1;nc|ENSG00000147133|P21675-15|TAF1;nc|ENSG00000147133|P21675-21|TAF1;nc|ENSG00000147133|P21675-25|TAF1	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.297507	1060.58046	2.7426	0.0014571	0.91442	0.00048583	3.657	0.001943	531.2975185973888	89.793	0.32159	90.016	89.807	90.129	0.22359	-0.087964	0.00050112	NaN	97.075	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1218200			5495	2166	2719	2735							0.05259493900257439
FLDDVVHSL	9	Unmodified	_FLDDVVHSL_					0	0	0		JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C;ENSG00000171988|ENST00000399262|JMJD1C	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.7733032107353	2	522.771657	1043.52876	2.3243	0.0012151	1.3903	0.00072679	3.7146	0.0019419	522.7719403698226	60.292	0.24454	60.292	60.199	60.444	0					13	7	2	0	0	0	0.12174	1	25169	25169		42.095	20.348	1	818020			5496	4223	2720	2736	6778	6778					0.008737502063468128
FLDDVVHSL	9	Unmodified	_FLDDVVHSL_					0	0	0		JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C;ENSG00000171988|ENST00000399262|JMJD1C	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7756835818291	2	522.771657	1043.52876	2.5001	0.001307	0.058328	3.0492E-05	2.5584	0.0013375	522.7711543636996	59.749	0.24921	60.074	59.933	60.182	0.32555					12	7	2	0	0	0	0.15635	1	25019	25019		37.974	19.839	1	897680			5497	4223	2720	2736	6779	6779					0.008737502063468128
FLDDVVHSL	9	Unmodified	_FLDDVVHSL_					0	0	0		JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C;ENSG00000171988|ENST00000399262|JMJD1C	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7695190310478	2	522.771657	1043.52876	1.5021	0.00078526	-0.5294	-0.00027675	0.97271	0.0005085	522.7709573945705	58.655	0.31906	60.073	59.941	60.26	1.4181					21	9	3	0	0	0	0.0092758	2	24576	24576;24633		108	63.59	1	3591600			5498	4223	2720	2736	6780;6781	6780					0.008737502063468128
FLDDVVHSL	9	Unmodified	_FLDDVVHSL_					0	0	0		JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant;nc|ENSG00000171988|Q15652-2|JMJD1C;nc|ENSG00000171988|Q15652-3|JMJD1C;ENSG00000171988|ENST00000399262|JMJD1C	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	JMJD1C|p.G987Efs*15|1|0.12|ENSG00000171988|chr10:63208709-63208709|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7728149294853	2	522.771657	1043.52876	1.0714	0.00056012	1.2399	0.0006482	2.3114	0.0012083	522.7719609117493	58.16	0.2534	60.129	59.993	60.247	1.969					20	7	3	0	0	0	0.0075027	2	24380	24380;24429		112.59	64.247	1	2981200			5499	4223	2720	2736	6782;6783	6782					0.008737502063468128
FLDEEVKLI	9	Unmodified	_FLDEEVKLI_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.3124267458916	2	553.310615	1104.60668	1.7797	0.00098474	1.2071	0.0006679	2.9868	0.0016526	553.3115641743152	61.757	0.22129	61.757	61.645	61.867	0					11	6	2	0	0	0	0.22154	1	25757	25757		30.637	5.2372	1	600910			5500	1082	2721	2737	6784	6784					0.05855763071735964
FLDEEVKLI	9	Unmodified	_FLDEEVKLI_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3126098513603	2	553.310615	1104.60668	2.4126	0.0013349	0.21715	0.00012015	2.6298	0.0014551	553.3112295113721	60.066	0.35711	61.486	61.298	61.656	1.4196					21	11	2	0	0	0	0.039278	1	25178	25178		76.825	29.076	1	3074700			5501	1082	2721	2737	6785	6785					0.05855763071735964
FLDEEVKLI	9	Unmodified	_FLDEEVKLI_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3121215701103	2	553.310615	1104.60668	2.7397	0.0015159	0.11181	6.1863E-05	2.8515	0.0015778	553.3109516118625	59.565	0.328	61.534	61.405	61.733	1.969					18	10	2	0	0	0	0.046715	1	25001	25001		70.332	16.499	1	2720600			5502	1082	2721	2737	6786	6786					0.05855763071735964
FLDEEVKLI	9	Unmodified	_FLDEEVKLI_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	553.310615	1104.60668	2.0381	0.0011277	1.6025	0.00088669	3.6406	0.0020144	553.3114611481654	61.22	0.28122	61.55	61.36	61.641	0.32974	-0.031585	0.0010558	NaN	76.825	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	564440			5503	1082	2721	2737							0.05855763071735964
FLDEGSLLRL	10	Unmodified	_FLDEGSLLRL_					0	0	0		ENST00000466942.2_1_10:77167305-77167401:+|nuORF	ENST00000466942.2_1_10:77167305-77167401:+|nuORF	ENST00000466942.2_1_10:77167305-77167401:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8269531130791	2	581.826963	1161.63937	1.8592	0.0010818	-2.996	-0.0017432	-1.1368	-0.0006614	581.8245347192591	69.155	0.26401	70.521	70.35	70.614	1.3657					21	8	3	0	0	0	0.18015	1	29012	29012		51.415	14.909	1	2326900			5504	6708	2722	2738	6787	6787					0.06501970194585738
FLDEGSLLRL	10	Unmodified	_FLDEGSLLRL_					0	0	0		ENST00000466942.2_1_10:77167305-77167401:+|nuORF	ENST00000466942.2_1_10:77167305-77167401:+|nuORF	ENST00000466942.2_1_10:77167305-77167401:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	581.826963	1161.63937	1.1483	0.00066809	-2.4357	-0.0014172	-1.2874	-0.00074907	581.8254725268841	70.283	0.20562	70.606	70.503	70.708	0.32224	-0.0086515	0.00076582	NaN	51.415	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	657200			5505	6708	2722	2738							0.06501970194585738
FLDENVHFF	9	Unmodified	_FLDENVHFF_					0	0	0		nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.2791015505791	2	584.277106	1166.53966	1.8717	0.0010936	0.31295	0.00018285	2.1847	0.0012765	584.2770251847719	65.417	0.28813	65.417	65.258	65.546	0					14	8	2	0	0	0	0.15635	1	27254	27254		37.974	20.861	1	660000			5506	2981	2723	2739	6788	6788					-0.0369484741938777
FLDENVHFF	9	Unmodified	_FLDENVHFF_					0	0	0		nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.2798950076103	2	584.277106	1166.53966	1.8057	0.0010551	0.46112	0.00026942	2.2669	0.0013245	584.2776687856046	64.884	0.28526	65.21	65.038	65.323	0.32689					15	8	2	0	0	0	0.25667	1	27175	27175		27.629	13.723	1	988780			5507	2981	2723	2739	6789	6789					-0.0369484741938777
FLDENVHFF	9	Unmodified	_FLDENVHFF_					0	0	0		nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2785522341728	2	584.277106	1166.53966	2.1352	0.0012475	0.045152	2.6381E-05	2.1803	0.0012739	584.2772589130395	63.681	0.52547	65.088	64.747	65.272	1.4071					50	16	4	0	0	0	0.04145	2	26697	26697;26746		74.929	36.955	1	3155800			5508	2981	2723	2739	6790;6791	6790					-0.0369484741938777
FLDENVHFF	9	Unmodified	_FLDENVHFF_					0	0	0		nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2773315310478	2	584.277106	1166.53966	2.1743	0.0012704	0.034227	1.9998E-05	2.2085	0.0012904	584.2768483625833	63.09	0.46561	65.035	64.814	65.279	1.9444					41	14	4	0	0	0	0.04145	2	26476	26476;26527		74.929	40.827	1	3702800			5509	2981	2723	2739	6792;6793	6792					-0.0369484741938777
FLDEYIFLA	9	Unmodified	_FLDEYIFLA_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000418231.2_1_X:73350641-73351442:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	565.7938110232353	2	565.792058	1129.56956	2.5475	0.0014414	-0.25481	-0.00014417	2.2927	0.0012972	565.7919321884417	91.547	0.32117	91.738	91.498	91.819	0.19041					16	9	2	0	0	0	0.66839	1	38342	38342		8.5933	3.3626	1	427240			5510	815	2724	2740	6794	6794					0.009960915259625835
FLDEYIFLA	9	Unmodified	_FLDEYIFLA_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000418231.2_1_X:73350641-73351442:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7949706912041	2	565.792058	1129.56956	4.1887	0.0023699	0.87957	0.00049766	5.0683	0.0028676	565.7930372114054	90.74	0.32028	91.721	91.525	91.846	0.98157					22	9	3	0	0	0	0.46905	1	38216	38216		16.942	4.4107	1	792810			5511	815	2724	2740	6795	6795					0.009960915259625835
FLDEYIFLA	9	Unmodified	_FLDEYIFLA_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000418231.2_1_X:73350641-73351442:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7927734255791	2	565.792058	1129.56956	4.0202	0.0022746	-0.93313	-0.00052796	3.0871	0.0017466	565.7917230586941	90.337	0.31689	91.703	91.482	91.799	1.366					17	9	2	0	0	0	0.46905	1	38054	38054		16.942	8.349	1	830490			5512	815	2724	2740	6796	6796					0.009960915259625835
FLDEYIFLA	9	Unmodified	_FLDEYIFLA_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000418231.2_1_X:73350641-73351442:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	565.792058	1129.56956	1.7405	0.00098476	1.2592	0.00071245	2.9997	0.0016972	565.7918975398326	91.823	0.31524	91.823	91.725	92.04	0	0.076546	0.0013059	NaN	16.942	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388690			5513	815	2724	2740							0.009960915259625835
FLDGDELTL	9	Unmodified	_FLDGDELTL_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5;ENSG00000159212|ENST00000349499|CLIC6;nc|ENSG00000159212|Q96NY7|CLIC6	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1022.504138171673	1	1022.50407	1021.49679	1.5613	0.0015965	1.5183	0.0015525	3.0796	0.0031489	1022.5033018167126	68.553	0.45926	69.918	69.662	70.122	1.3657					34	14	4	0	0	0	0.076627	1	28761	28761		57.471	9.1255	1	2442900			5514	1795	2725	2741	6797	6797					-0.01309662267465228
FLDGHDLQL	9	Unmodified	_FLDGHDLQL_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA;SPECC1L-MKL1|1|fusion	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2700683474541	2	529.269281	1056.52401	0.98213	0.00051981	0.2885	0.00015269	1.2706	0.0006725	529.2691250181967	52.563	0.34137	53.959	53.712	54.053	1.3966					14	10	2	0	0	0	0.23535	1	21981	21981		29.082	8.2104	1	1288300			5515	4950	2726	2742	6798	6798					-0.0019913393641672883
FLDGHDLQL	9	Unmodified	_FLDGHDLQL_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA;SPECC1L-MKL1|1|fusion	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2695800662041	2	529.269281	1056.52401	1.5132	0.00080091	-0.82518	-0.00043674	0.68807	0.00036417	529.2688325817572	51.997	0.31036	53.969	53.799	54.109	1.9722					16	9	2	0	0	0	0.12251	1	21788	21788		41.84	20.968	1	1513800			5516	4950	2726	2742	6799	6799					-0.0019913393641672883
FLDGHDLQL	9	Unmodified	_FLDGHDLQL_					0	0	0		nc|ENSG00000196588|Q969V6|MRTFA;ENSG00000196588|ENST00000355630|MRTFA;SPECC1L-MKL1|1|fusion	nc|ENSG00000196588|Q969V6|MRTFA	nc|ENSG00000196588|Q969V6|MRTFA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	529.269281	1056.52401	1.9949	0.0010558	-0.26558	-0.00014056	1.7293	0.00091528	529.7706671985193	54.233	0.096321	54.233	54.152	54.249	0	0.17947	0.00019111	NaN	41.84	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290320			5517	4950	2726	2742							-0.0019913393641672883
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1021.519396960735	1	1021.52005	1020.51278	1.7113	0.0017482	-1.3001	-0.001328	0.41127	0.00042013	1021.5184840855139	67.119	0.42514	67.119	66.893	67.318	0					31	13	3	0	0	0	0.079895	2	28001	27902;28001		56.177	12.319	1	5326500			5518	5227	2727	2743	6800;6801	6801					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.2649719119072	2	511.263665	1020.51278	1.9251	0.00098424	-2.5604	-0.001309	-0.63525	-0.00032478	511.26279130357983	67.11	0.36667	67.11	66.893	67.26	0					21	11	3	0	0	0	0.13873	1	27924	27924		39.957	3.9131	1	3022200			5519	5227	2727	2743	6802	6802					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1021.52305907011	1	1021.52005	1020.51278	2.2312	0.0022792	-0.020579	-2.1022E-05	2.2106	0.0022582	1021.5203521562694	66.754	0.37475	67.079	66.876	67.25	0.32449					34	11	4	0	0	0	0.019432	3	27933	27889;27933;27974		99.799	19.137	1	7131200			5520	5227	2727	2743	6803;6804;6805	6804					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.2643310427666	2	511.263665	1020.51278	2.0269	0.0010363	0.10951	5.5987E-05	2.1364	0.0010923	511.2637615913724	66.692	0.37475	67.016	66.876	67.25	0.32449					31	11	4	0	0	0	0.066815	2	27960	27910;27960		61.357	3.8861	1	8191600			5521	5227	2727	2743	6806;6807	6807					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.523608386517	1	1021.52005	1020.51278	1.8495	0.0018893	-1.2643	-0.0012916	0.5851	0.0005977	1021.5206034024511	65.62	0.70026	67.019	66.788	67.488	1.3989					72	22	5	0	0	0	0.049839	1	27642	27642		68.081	13.307	1	25848000			5522	5227	2727	2743	6808	6808					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1021.521777331829	1	1021.52005	1020.51278	1.8958	0.0019366	-1.1884	-0.0012139	0.7074	0.00072262	1021.5204611584461	65.263	0.68372	67.171	66.876	67.559	1.9085					65	21	4	0	0	0	0.026836	2	27402	27402;27442		92.491	13.307	1	25487000			5523	5227	2727	2743	6809;6810	6809					0.003340439694284214
FLDGNELTL	9	Unmodified	_FLDGNELTL_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2645141482353	2	511.263665	1020.51278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.178	1	67.087	66.587	67.587	1.9085								0	0	0	0.026243	1	27339	27339		74.929	3.7954	1				5524	5227	2727	2743	6811	6811					0.003340439694284214
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.2422973513603	2	520.241875	1038.4692	2.3188	0.0012064	-3.5688	-0.0018566	-1.2499	-0.00065027	520.2397071976467	60.036	0.29282	60.036	59.856	60.149	0					15	9	2	0	0	0	0.20671	1	25020	25020		32.305	12.866	1	1785700			5525	4094	2728	2744	6812	6812					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1039.480395495892	1	1039.47647	1038.4692	2.1166	0.0022001	-3.9102	-0.0040646	-1.7937	-0.0018645	1039.4697349194296	60.056	0.18262	60.056	59.915	60.097	0					8	5	2	0	0	0	0.098163	1	25021	25021		49.933	22.304	1	1567300			5526	4094	2728	2744	6813	6813					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.2440063357353	2	520.241875	1038.4692	2.5264	0.0013143	-0.84967	-0.00044204	1.6767	0.00087231	520.2411962945362	59.559	0.31509	59.885	59.743	60.058	0.32553					20	9	3	0	0	0	0.37357	1	24930	24930		21.747	5.9784	1	2751100			5527	4094	2728	2744	6814	6814					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2415038943291	2	520.241875	1038.4692	1.2309	0.00064039	-2.8468	-0.001481	-1.6158	-0.00084063	520.2405263003941	58.475	0.37911	59.893	59.752	60.132	1.4181					30	11	3	0	0	0	0.066815	2	24549	24508;24549		61.357	26.956	1	7122600			5528	4094	2728	2744	6815;6816	6816					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2421142458916	2	520.241875	1038.4692	0.9224	0.00047987	-1.8002	-0.00093656	-0.87783	-0.00045669	520.241432835987	58.099	0.39987	60.068	59.814	60.214	1.969					36	12	4	0	0	0	0.033504	2	24351	24299;24351		81.89	27.117	1	30174000			5529	4094	2728	2744	6817;6818	6818					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1039.473071277142	1	1039.47647	1038.4692	1.8587	0.0019321	-2.6194	-0.0027228	-0.76066	-0.00079069	1039.4742166047517	58.039	0.21033	60.008	59.842	60.053	1.969					12	6	3	0	0	0	0.15635	1	24353	24353		37.974	7.3375	1	10016000			5530	4094	2728	2744	6819	6819					-0.04849888799344626
FLDGNEMTL	9	Unmodified	_FLDGNEMTL_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1039.47647	1038.4692	2.8441	0.0029564	1.7783	0.0018485	4.6224	0.0048048	1039.4753105126	59.566	0.18802	59.891	59.776	59.964	0.32554	-0.093829	0.0043872	NaN	49.933	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1521800			5531	4094	2728	2744							-0.04849888799344626
FLDGNEMTL	9	Oxidation (M)	_FLDGNEM(Oxidation (M))TL_		FLDGNEM(1)TL		FLDGNEM(44)TL	0	0	1		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2390014529228	2	528.239332	1054.46411	2.0065	0.0010599	-2.0232	-0.0010688	-0.016721	-8.8329E-06	528.2380720764719	41.478	0.35874	43.371	43.15	43.508	1.8927					19	11	2	0	0	0	0.11643	1	17394	17394		43.858	9.7559	1	1935600			5532	4094	2728	2745	6820	6820		68			-0.060941926619761944
FLDGNEMTL	9	Oxidation (M)	_FLDGNEM(Oxidation (M))TL_					0	0	1		ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	ENSG00000169504|ENST00000374379|CLIC4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	528.239332	1054.46411	1.9191	0.0010137	4.3297	0.0022871	6.2487	0.0033008	528.2418392830217	43.476	0.31648	43.476	43.302	43.619	0	0.053192	0.0022771	NaN	43.858	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1492800			5533	4094	2728	2745				68			-0.060941926619761944
FLDHEMVFL	9	Unmodified	_FLDHEMVFL_					0	0	0		ENSG00000130772|ENST00000373842|MED18;MED18|p.F117Hfs*18|1|0.12|ENSG00000130772|chr1:28334691-28334692|-/CATCACCACGCCCAGCTAA|frameshift_variant	ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.7857543826103	2	575.78371	1149.55287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.958	1	71.281	70.781	71.781	0.32359								0	0	0	0.317	1	29701	29701		16.942	8.349	1				5534	2460	2729	2746	6821	6821					-0.015927326316386825
FLDHEMVFL	9	Unmodified	_FLDHEMVFL_					0	0	0		ENSG00000130772|ENST00000373842|MED18;MED18|p.F117Hfs*18|1|0.12|ENSG00000130772|chr1:28334691-28334692|-/CATCACCACGCCCAGCTAA|frameshift_variant	ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7853881716728	2	575.78371	1149.55287	2.4402	0.0014051	-0.091393	-5.2623E-05	2.3489	0.0013524	575.7846274791093	69.747	0.37616	71.101	70.896	71.272	1.3536					29	11	4	0	0	0	0.09539	2	29246	29246;29295		50.855	20.63	1	4094900			5535	2460	2729	2746	6822;6823	6822					-0.015927326316386825
FLDHEMVFL	9	Unmodified	_FLDHEMVFL_					0	0	0		ENSG00000130772|ENST00000373842|MED18;MED18|p.F117Hfs*18|1|0.12|ENSG00000130772|chr1:28334691-28334692|-/CATCACCACGCCCAGCTAA|frameshift_variant	ENSG00000130772|ENST00000373842|MED18	ENSG00000130772|ENST00000373842|MED18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7826415896416	2	575.78371	1149.55287	1.6541	0.0009524	-1.6119	-0.00092813	0.042166	2.4279E-05	575.7842059867062	69.204	0.31061	71.057	70.92	71.23	1.853					20	9	4	0	0	0	0.12174	1	29023	29023		42.095	15.211	1	3682100			5536	2460	2729	2746	6824	6824					-0.015927326316386825
FLDHIIASV	9	Unmodified	_FLDHIIASV_					0	0	0		CTNNA1-KDM3B|1|fusion;nc|ENSG00000120733|Q7LBC6-3|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B	CTNNA1-KDM3B|1|fusion	CTNNA1-KDM3B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7853881716728	2	507.784567	1013.55458	2.3376	0.001187	0.81447	0.00041358	3.1521	0.0016006	507.7845465025733	60.379	0.34604	60.379	60.227	60.573	0					24	10	3	0	0	0	0.27148	2	25168	25168;25222		26.884	9.9414	1	1353000			5537	383	2730	2747	6825;6826	6825					0.048346444486242035
FLDHIIASV	9	Unmodified	_FLDHIIASV_					0	0	0		CTNNA1-KDM3B|1|fusion;nc|ENSG00000120733|Q7LBC6-3|KDM3B;nc|ENSG00000120733|Q7LBC6-2|KDM3B;ENSG00000120733|ENST00000314358|KDM3B	CTNNA1-KDM3B|1|fusion	CTNNA1-KDM3B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7836486697197	2	507.784567	1013.55458	2.5915	0.0013159	-1.0422	-0.00052922	1.5493	0.00078669	507.78369207396923	59.83	0.30738	60.158	59.935	60.243	0.32809					16	9	2	0	0	0	0.13873	2	25035	25035;25100		39.957	11.47	1	1135600			5538	383	2730	2747	6827;6828	6827					0.048346444486242035
FLDIDEKLL	9	Unmodified	_FLDIDEKLL_					0	0	0			REV__nc|ENSG00000152778|Q13325-2|IFIT5	REV__nc|ENSG00000152778|Q13325-2|IFIT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3129150271416	2	553.310615	1104.60668	2.4126	0.0013349	0.21715	0.00012015	2.6298	0.0014551	553.3112295113721	60.066	0.35711	61.486	61.298	61.656	1.4196					21	11	2	0	0	0	0.49082	1	25241	25241		15.847	0	1	3074700	+		5539	10433	2731	2748	6829	6829					0.05855763071735964
FLDKAKTKSL	10	Unmodified	_FLDKAKTKSL_					0	0	0			REV__B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	REV__B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8437377810478	2	575.845156	1149.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.077	1	71.4	70.9	71.9	0.32359								0	0	0	0.66052	1	29750	29750		3.5965	0.60125	1		+		5540	8157	2732	2749	6830	6830					0.10690847091291289
FLDKAKTKSL	10	Unmodified	_FLDKAKTKSL_					0	0	0			REV__B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	REV__B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8445922732353	2	575.845156	1149.67576	2.5416	0.0014636	-2.9719	-0.0017113	-0.43023	-0.00024775	575.8431631757659	75.333	0.92003	76.639	76.374	77.294	1.3063					71	29	3	0	0	0	0.85124	1	31549	31549		6.7232	2.3939	1	1861900	+		5541	8157	2732	2749	6831	6831					0.10690847091291289
FLDKDYPLL	9	Unmodified	_FLDKDYPLL_					0	0	0			REV__nc|ENSG00000112282|Q9ULK4-6|MED23	REV__nc|ENSG00000112282|Q9ULK4-6|MED23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3080932497978	2	562.305332	1122.59611	2.2232	0.0012501	1.096	0.0006163	3.3192	0.0018664	562.3059960484217	65.968	0.91154	67.367	66.941	67.853	1.3989					67	29	3	0	0	0	0.21592	2	27645	27551;27645		31.268	0	1	2148800	+		5542	9361	2733	2750	6832;6833	6833					0.03971780417282389
FLDKPEDVLL	10	Unmodified	_FLDKPEDVLL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8284179568291	2	594.829172	1187.64379	1.9991	0.0011891	-0.7871	-0.00046819	1.212	0.00072092	594.8286696493232	58.916	0.26862	60.336	60.198	60.467	1.4196					14	8	2	0	0	0	0.2264	1	24718	24718		45.74	14.472	1	1870800			5543	1101	2734	2751	6834	6834					0.05747434617478575
FLDKPEDVLL	10	Unmodified	_FLDKPEDVLL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000088367|Q9H4G0-3|EPB41L1	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8307372927666	2	594.829172	1187.64379	1.6871	0.0010036	0.98598	0.00058649	2.6731	0.00159	594.8295793048164	58.458	0.208	60.427	60.279	60.487	1.969					14	6	3	0	0	0	0.25725	1	24525	24525		41.956	12.874	1	1618200			5544	1101	2734	2751	6835	6835					0.05747434617478575
FLDLGPPGI	9	Unmodified	_FLDLGPPGI_					0	0	0		nc|ENSG00000011275|Q9NWF9|RNF216;RNF216|p.L834Pfs*8|1|0.1|ENSG00000011275|chr7:5622959-5622960|CA/-|frameshift_variant;ENSG00000011275|ENST00000389902|RNF216	nc|ENSG00000011275|Q9NWF9|RNF216	nc|ENSG00000011275|Q9NWF9|RNF216	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.5177490115166	1	928.513845	927.506569	2.6352	0.0024468	1.2875	0.0011955	3.9228	0.0036423	928.5142828643195	75.909	0.36536	77.203	77.006	77.371	1.2938					20	11	2	0	0	0	0.10722	1	31835	31835		46.921	2.5139	1	1720800			5545	566	2735	2752	6836	6836					0.03991570528569355
FLDLGPPGI	9	Unmodified	_FLDLGPPGI_					0	0	0		nc|ENSG00000011275|Q9NWF9|RNF216;RNF216|p.L834Pfs*8|1|0.1|ENSG00000011275|chr7:5622959-5622960|CA/-|frameshift_variant;ENSG00000011275|ENST00000389902|RNF216	nc|ENSG00000011275|Q9NWF9|RNF216	nc|ENSG00000011275|Q9NWF9|RNF216	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	928.513845	927.506569	2.8801	0.0026742	2.2459	0.0020853	5.126	0.0047595	928.5139872542354	75.399	0.30867	77.181	77.009	77.318	1.7817	-0.053579	0.0007982	NaN	46.921	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1854600			5546	566	2735	2752							0.03991570528569355
FLDLNNYKEF	10	Unmodified	_FLDLNNYKEF_					0	0	0			REV__ENSG00000133858|ENST00000378743|ZFC3H1	REV__ENSG00000133858|ENST00000378743|ZFC3H1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828002810478	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.563	1	39.383	38.883	39.883	1.8202								0	0	0	0.66161	1	15757	15757		1.7423	0	1		+		5547	9886	2736	2753	6837	6837					-0.009546375306854316
FLDLTEQEF	9	Unmodified	_FLDLTEQEF_					0	0	0		ENST00000457262.1_1_10:43062145-43062928:+|nuORF;ENST00000495197.1_1_10:38368986-38369799:-|nuORF;nc|ENSG00000100129|Q9Y262-2|EIF3L;ENSG00000100129|ENST00000652021|EIF3L	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	ENST00000457262.1_1_10:43062145-43062928:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	571.7402831912041	2	571.274229	1140.53391	2.2776	0.0013011	-2.2399	-0.0012796	0.037655	2.1511E-05	571.2725231499649	69.498	0.31538	71.351	71.168	71.484	1.853					15	9	2	0	0	0	0.10844	1	29204	29204		16.942	6.8684	1	820730			5548	1244	2737	2754	6838	6838					-0.030739907217139262
FLDLTVQQI	9	Unmodified	_FLDLTVQQI_					0	0	0		ENST00000494536.5_1_2:64083453-64109797:+|nuORF;ENST00000466642.5_2_2:64084828-64111237:+|nuORF;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;ENSG00000169764|ENST00000337130|UGP2	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8060790896416	2	538.802957	1075.59136	2.8184	0.0015186	1.9574	0.0010546	4.7758	0.0025732	538.8041554552706	72.054	0.33015	73.878	73.694	74.024	1.8239					16	10	2	0	0	0	0.34572	1	30234	30234		23.148	0	1	1607500			5549	4111	2738	2755	6839	6839					0.05658896274530889
FLDLTVQQI	9	Unmodified	_FLDLTVQQI_					0	0	0		ENST00000494536.5_1_2:64083453-64109797:+|nuORF;ENST00000466642.5_2_2:64084828-64111237:+|nuORF;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;ENSG00000169764|ENST00000337130|UGP2	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	538.802957	1075.59136	1.6707	0.00090016	0.85033	0.00045816	2.521	0.0013583	538.8038546079755	73.885	0.21928	73.885	73.795	74.014	0	0.015889	-0.00079527	NaN	23.148	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	325390			5550	4111	2738	2755							0.05658896274530889
FLDLTVQQI	9	Unmodified	_FLDLTVQQI_					0	0	0		ENST00000494536.5_1_2:64083453-64109797:+|nuORF;ENST00000466642.5_2_2:64084828-64111237:+|nuORF;ENST00000475550.5_1_2:64069329-64114799:+|nuORF;nc|ENSG00000169764|Q16851-2|UGP2;ENSG00000169764|ENST00000337130|UGP2	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	ENST00000494536.5_1_2:64083453-64109797:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	538.802957	1075.59136	3.0082	0.0016208	1.4945	0.00080523	4.5027	0.002426	538.8041837944137	72.515	0.2998	73.845	73.643	73.943	1.3298	-0.024584	-0.00010113	NaN	23.148	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147400			5551	4111	2738	2755							0.05658896274530889
FLDMMARK	8	2 Oxidation (M)	_FLDM(Oxidation (M))M(Oxidation (M))ARK_		FLDM(1)M(1)ARK		FLDM(51)M(51)ARK	0	0	2		SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|61|2|anti-sense	SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|61|2|anti-sense	SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|61|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2555419802666	2	522.254262	1042.49397	2.6008	0.0013583	-0.27518	-0.00014371	2.3257	0.0012146	522.2547000001283	65.651	0.58203	67.05	66.817	67.399	1.3989					30	18	2	0	0	0	0.45419	1	27539	27539		50.855	8.7605	1	6521100			5552	16014	2739	2756	6840	6840		130;131			-0.025575321976248233
FLDNAIMIV	9	Oxidation (M)	_FLDNAIM(Oxidation (M))IV_		FLDNAIM(1)IV		FLDNAIM(55)IV	0	0	1		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2796508669853	2	526.27826	1050.54197	1.8723	0.00098537	0.00021352	1.1237E-07	1.8725	0.00098548	526.2785283515859	72.761	0.56493	72.761	72.588	73.153	0					39	17	4	0	0	0	0.083604	1	30259	30259		54.774	7.0249	1	5178200			5553	3810	2740	2757	6841	6841		63			0.018718649940410614
FLDNAIMIV	9	Oxidation (M)	_FLDNAIM(Oxidation (M))IV_		FLDNAIM(1)IV		FLDNAIM(78)IV	0	0	1		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.2796508669853	2	526.27826	1050.54197	2.0902	0.0011	0.53406	0.00028106	2.6243	0.0013811	526.2786103842153	72.364	0.56578	72.689	72.42	72.986	0.32494					40	17	3	0	0	0	0.037761	1	30269	30269		78.149	15.577	1	5136900			5554	3810	2740	2757	6842	6842		63			0.018718649940410614
FLDNAIMIV	9	Oxidation (M)	_FLDNAIM(Oxidation (M))IV_		FLDNAIM(1)IV		FLDNAIM(68)IV	0	0	1		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2796508669853	2	526.27826	1050.54197	2.2643	0.0011916	-0.057228	-3.0118E-05	2.2071	0.0011615	526.2783229661736	71.282	0.5466	72.623	72.42	72.967	1.3415					46	17	4	0	0	0	0.049839	1	29929	29929		68.081	10.359	1	7363600			5555	3810	2740	2757	6843	6843		63			0.018718649940410614
FLDNAIMIV	9	Oxidation (M)	_FLDNAIM(Oxidation (M))IV_		FLDNAIM(1)IV		FLDNAIM(59)IV	0	0	1		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2798339724541	2	526.27826	1050.54197	0.97856	0.00051499	1.1129	0.0005857	2.0915	0.0011007	526.2790178190533	70.826	0.51393	72.664	72.472	72.986	1.8378					46	16	4	0	0	0	0.073578	2	29743	29695;29743		58.679	9.1245	1	8324800			5556	3810	2740	2757	6844;6845	6845		63			0.018718649940410614
FLDNAIMIV	9	Unmodified	_FLDNAIMIV_					0	0	0		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1035.554614245892	1	1035.55433	1034.54705	2.2429	0.0023227	-1.9944	-0.0020653	0.24858	0.00025742	1035.5528162615035	82.937	0.33791	82.937	82.8	83.138	0					20	10	3	0	0	0	0.049839	2	34554	34554;34602		68.081	11.757	1	1316900			5557	3810	2740	2758	6846;6847	6846					0.031161688566726298
FLDNAIMIV	9	Unmodified	_FLDNAIMIV_					0	0	0		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1035.557177722454	1	1035.55433	1034.54705	2.6732	0.0027682	0.7768	0.00080441	3.45	0.0035726	1035.5544434097815	82.511	0.30493	82.791	82.644	82.949	0.2802					17	9	2	0	0	0	0.098163	1	34545	34545		49.933	17.147	1	1558500			5558	3810	2740	2758	6848	6848					0.031161688566726298
FLDNAIMIV	9	Unmodified	_FLDNAIMIV_					0	0	0		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1035.557666003704	1	1035.55433	1034.54705	2.8638	0.0029656	-1.3713	-0.0014201	1.4925	0.0015456	1035.553407334306	81.625	0.43224	82.858	82.564	82.996	1.2332					32	13	3	0	0	0	0.037761	2	34271	34227;34271		78.149	6.2271	1	5414200			5559	3810	2740	2758	6849;6850	6850					0.031161688566726298
FLDNAIMIV	9	Unmodified	_FLDNAIMIV_					0	0	0		ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	ENSG00000164983|ENST00000297632|TMEM65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1035.557177722454	1	1035.55433	1034.54705	3.8377	0.0039741	-1.3485	-0.0013964	2.4892	0.0025777	1035.5542944516392	81.18	0.37223	82.876	82.671	83.043	1.6959					26	11	3	0	0	0	0.033504	2	34050	34003;34050		81.89	9.7227	1	5138100			5560	3810	2740	2758	6851;6852	6852					0.031161688566726298
FLDPDRHFL	9	Unmodified	_FLDPDRHFL_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.2013122439384	3	387.201341	1158.58219	1.6531	0.0006401	-1.1304	-0.0004377	0.52273	0.0002024	387.20064581598666	41.001	0.91899	42.326	42.054	42.973	1.3254					49	28	3	0	0	0	0.49297	1	17224	17224		15.739	2.866	1	2843400			5561	4563	2741	2759	6853	6853					0.009245477088597909
FLDPDRHFL	9	Unmodified	_FLDPDRHFL_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.2011596560478	3	387.201341	1158.58219	1.9068	0.0007383	-2.0645	-0.00079938	-0.15776	-6.1084E-05	387.20017774441277	40.575	0.94556	42.437	42.233	43.179	1.8624					50	29	3	0	0	0	0.56115	1	16991	16991		12.873	4.1272	1	3557000			5562	4563	2741	2759	6854	6854					0.009245477088597909
FLDPDRHFL	9	Unmodified	_FLDPDRHFL_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3005248904228	2	580.298373	1158.58219	2.0931	0.0012146	-0.70491	-0.00040906	1.3882	0.00080557	580.2975496190733	40.639	0.25269	42.501	42.327	42.58	1.8624					13	7	2	0	0	0	0.37668	1	17007	17007		22.736	2.2827	1	726070			5563	4563	2741	2759	6855	6855					0.009245477088597909
FLDPDRHFL	9	Unmodified	_FLDPDRHFL_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	580.298373	1158.58219	2.2222	0.0012895	3.5088	0.0020362	5.731	0.0033257	580.3022406142386	41.01	0.44002	42.335	42.178	42.619	1.3254	-0.083038	0.0040301	NaN	22.736	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	630280			5564	4563	2741	2759							0.009245477088597909
FLDSTSPLL	9	Unmodified	_FLDSTSPLL_					0	0	0		ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	ENSG00000136813|ENST00000684092|ECPAS	ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	992.5357543826103	1	992.529889	991.522613	3.4369	0.0034112	-0.37835	-0.00037553	3.0585	0.0030357	992.5296088498185	66.253	0.24391	67.642	67.507	67.751	1.3888					11	7	2	0	0	0	0.22519	1	27790	27790		30.225	13.283	1	931890			5565	2738	2742	2760	6856	6856					0.026512319748235313
FLDSTSPLL	9	Unmodified	_FLDSTSPLL_					0	0	0		ENSG00000136813|ENST00000684092|ECPAS;nc|ENSG00000136813|Q5VYK3|ECPAS	ENSG00000136813|ENST00000684092|ECPAS	ENSG00000136813|ENST00000684092|ECPAS	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	992.529889	991.522613	2.2806	0.0022636	0.43196	0.00042874	2.7126	0.0026923	992.530467613405	65.785	0.18283	67.693	67.616	67.799	1.9085	0.025809	0.00040323	NaN	30.225	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622040			5566	2738	2742	2760							0.026512319748235313
FLDWRKMK	8	Unmodified	_FLDWRKMK_					0	0	0		nc|ENSG00000148848|O43184-3|ADAM12;nc|ENSG00000148848|O43184-4|ADAM12;nc|ENSG00000148848|O43184-2|ADAM12;ENSG00000148848|ENST00000448723|ADAM12;nc|ENSG00000148848|O43184|ADAM12	nc|ENSG00000148848|O43184-3|ADAM12	nc|ENSG00000148848|O43184-3|ADAM12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3067504763603	2	562.307687	1122.60082	1.2509	0.00070338	-1.1093	-0.00062378	0.14156	7.9598E-05	562.3068972491089	67.536	0.46371	67.536	67.231	67.695	0					35	14	3	0	0	0	0.73597	1	28057	28057		26.884	2.8631	1	1025300			5567	3225	2743	2761	6857	6857					0.04442386079062999
FLDWRKMK	8	Unmodified	_FLDWRKMK_					0	0	0		nc|ENSG00000148848|O43184-3|ADAM12;nc|ENSG00000148848|O43184-4|ADAM12;nc|ENSG00000148848|O43184-2|ADAM12;ENSG00000148848|ENST00000448723|ADAM12;nc|ENSG00000148848|O43184|ADAM12	nc|ENSG00000148848|O43184-3|ADAM12	nc|ENSG00000148848|O43184-3|ADAM12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3088256716728	2	562.307687	1122.60082	1.7422	0.00097967	-1.8012	-0.0010128	-0.058966	-3.3157E-05	562.3065839160665	66.98	0.49879	67.304	67.031	67.53	0.32409					27	16	2	0	0	0	0.73597	1	27993	27993		26.884	2.8631	1	1640300			5568	3225	2743	2761	6858	6858					0.04442386079062999
FLDWSTLIL	9	Unmodified	_FLDWSTLIL_					0	0	0		tr|A0A7D6ZWE3|A0A7D6ZWE3_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_17495PE=4SV=1	tr|A0A7D6ZWE3|A0A7D6ZWE3_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_17495PE=4SV=1	tr|A0A7D6ZWE3|A0A7D6ZWE3_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_17495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.3082763552666	2	554.307875	1106.6012	1.3733	0.00076123	0.0020167	1.1178E-06	1.3753	0.00076235	554.3072563999274	76.319	0.3643	76.319	76.164	76.529	0					29	11	3	0	0	0	0.19075	1	31752	31752		34.102	0	1	3467000			5569	17169	2744	2762	6859	6859					0.05216084279913957
FLEAFIVEV	9	Unmodified	_FLEAFIVEV_					0	0	0			REV__ENSG00000136937|ENST00000375147|NCBP1	REV__ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1066.589404284954	1	1066.58192	1065.57465	2.3128	0.0024668	0.17802	0.00018988	2.4908	0.0026567	1066.5813899826935	83.244	0.33582	83.244	83.076	83.412	0					22	10	3	0	0	0	0.1735	1	34657	34657		36.044	5.8194	1	1864200	+		5570	10003	2745	2763	6860	6860					0.044483953885674055
FLEAFIVEV	9	Unmodified	_FLEAFIVEV_					0	0	0			REV__ENSG00000136937|ENST00000375147|NCBP1	REV__ENSG00000136937|ENST00000375147|NCBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1066.593920886517	1	1066.58192	1065.57465	2.9205	0.0031149	1.9833	0.0021154	4.9038	0.0052303	1066.5838634510228	82.715	0.30482	82.985	82.847	83.152	0.27029					19	9	3	0	0	0	0.11478	2	34585	34585;34636		44.407	6.2558	1	2276600	+		5571	10003	2745	2763	6861;6862	6861					0.044483953885674055
FLEAPCFGCL	10	Unmodified	_FLEAPCFGCL_					0	0	0			REV__nc|ENSG00000108848|O95232-2|LUC7L3	REV__nc|ENSG00000108848|O95232-2|LUC7L3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2192260622978	2	550.251188	1098.48782	3.1754	0.0017473	-2.2822	-0.0012558	0.89325	0.00049151	550.2526634428195	74.272	0.67239	75.59	75.125	75.797	1.318					55	21	6	0	0	0	0.12513	1	31039	31039		1.8442	0.36234	1	4463500	+		5572	9265	2746	2764	6863	6863					-0.057480504291334
FLEAPCFGCL	10	Unmodified	_FLEAPCFGCL_					0	0	0			REV__nc|ENSG00000108848|O95232-2|LUC7L3	REV__nc|ENSG00000108848|O95232-2|LUC7L3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	550.251188	1098.48782	2.8876	0.0015889	-1.4642	-0.00080567	1.4234	0.00078323	550.7494573351053	73.812	0.76937	75.608	75.039	75.808	1.7962	0.0090052	0.00045838	NaN	1.8442	57	24	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2774100	+		5573	9265	2746	2764							-0.057480504291334
FLEEFRTSL	9	Unmodified	_FLEEFRTSL_					0	0	0		ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	ENSG00000221829|ENST00000378643|FANCG	MSMS	GG20161007_CRH_Patient100_W632_02	4	571.2985717654228	2	571.298039	1140.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.118	1	96.52	96.02	97.02	0.40208								0	0	0	0.35192	1	40435	40435		13.508	0	1				5574	5270	2747	2765	6864	6864					0.01685708269155839
FLEFMVSF	8	Unmodified	_FLEFMVSF_					0	0	0		tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2492248415947	2	510.248972	1018.48339	4.8584	0.002479	-1.6167	-0.00082489	3.2418	0.0016541	510.2480750095395	86.848	0.33837	88.343	88.18	88.518	1.4953					28	10	3	0	0	0	0.87276	1	36599	36599		13.508	0	1	1735700			5575	17182	2748	2766	6865	6865					-0.02511191580401828
FLEFMVSF	8	Unmodified	_FLEFMVSF_					0	0	0		tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	510.248972	1018.48339	4.7121	0.0024043	-1.3093	-0.00066806	3.4028	0.0017363	510.2482369202853	87.33	0.4012	88.421	88.21	88.612	1.0918	0.039182	0.00016275	NaN	13.508	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2492900			5576	17182	2748	2766							-0.02511191580401828
FLEGLPSS	8	Unmodified	_FLEGLPSS_					0	0	0			REV__ENSG00000134255|ENST00000357172|CEPT1	REV__ENSG00000134255|ENST00000357172|CEPT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	425.7530090212822	2	425.221268	848.427984	2.0628	0.00087715	1.7938	0.00076274	3.8566	0.0016399	425.2218199153622	69.295	0.58994	70.66	70.413	71.002	1.3657					38	19	3	0	0	0	2.3239	1	29154	29154		5.2307	4.437	1	4050500	+		5577	9899	2749	2767	6866	6866					-0.002292817765237487
FLEINKEIL	9	Unmodified	_FLEINKEIL_					0	0	0			REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8282958865166	2	559.826432	1117.63831	2.5377	0.0014207	0.41859	0.00023434	2.9563	0.001655	559.8264335811195	59.461	0.46728	60.881	60.678	61.146	1.4196					30	14	3	0	0	0	0.019432	1	24937	24937		99.799	3.4324	1	3780200	+		5578	8454	2750	2768	6867	6867					0.08419755825661923
FLEINKEIL	9	Unmodified	_FLEINKEIL_					0	0	0			REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	559.826432	1117.63831	1.6914	0.00094692	0.87451	0.00048957	2.566	0.0014365	559.826692974592	61.365	0.31515	61.365	61.172	61.487	0	0.32423	0.00050311	NaN	99.799	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1038100	+		5579	8454	2750	2768							0.08419755825661923
FLEINKEIL	9	Unmodified	_FLEINKEIL_					0	0	0			REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	REV__DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	559.826432	1117.63831	2.4028	0.0013451	0.56664	0.00031722	2.9694	0.0016624	559.8266293991278	58.923	0.34431	60.892	60.723	61.067	1.969	-0.14935	0.00015841	NaN	99.799	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3031100	+		5580	8454	2750	2768							0.08419755825661923
FLEKLLPPV	9	Unmodified	_FLEKLLPPV_					0	0	0		ENST00000472213.1_1_1:24120901-24121219:+|nuORF;ENSG00000011009|ENST00000374514|LYPLA2	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3293945193291	2	528.328611	1054.64267	1.7112	0.00090407	-0.2522	-0.00013324	1.459	0.00077082	528.328420597037	68.75	0.93454	68.75	68.485	69.42	0					85	29	4	0	0	0	0.043696	4	28620	28572;28620;28699;28821		72.968	11.61	1	9252500			5581	561	2751	2769	6868;6869;6870;6871	6869					0.11753265039214966
FLEKLLPPV	9	Unmodified	_FLEKLLPPV_					0	0	0		ENST00000472213.1_1_1:24120901-24121219:+|nuORF;ENSG00000011009|ENST00000374514|LYPLA2	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3297607302666	2	528.328611	1054.64267	1.7236	0.00091065	0.30413	0.00016068	2.0278	0.0010713	528.3287566625507	68.289	0.9072	68.611	68.313	69.22	0.32223					82	28	4	0	0	0	0.033102	5	28550	28502;28550;28589;28644;28700		82.529	20.102	1	10844000			5582	561	2751	2769	6872;6873;6874;6875;6876	6873					0.11753265039214966
FLEKLLPPV	9	Unmodified	_FLEKLLPPV_					0	0	0		ENST00000472213.1_1_1:24120901-24121219:+|nuORF;ENSG00000011009|ENST00000374514|LYPLA2	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3301269412041	2	528.328611	1054.64267	1.8099	0.00095623	-0.1521	-8.0356E-05	1.6578	0.00087588	528.3284725725738	67.057	1.4125	68.446	68.121	69.534	1.3887					141	45	5	0	0	0	0.04812	3	28093	28045;28093;28293		69.105	16.837	1	52826000			5583	561	2751	2769	6877;6878;6879	6878					0.11753265039214966
FLEKLLPPV	9	Unmodified	_FLEKLLPPV_					0	0	0		ENST00000472213.1_1_1:24120901-24121219:+|nuORF;ENSG00000011009|ENST00000374514|LYPLA2	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	ENST00000472213.1_1_1:24120901-24121219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3300659060478	2	528.328611	1054.64267	1.6413	0.00086715	-0.51372	-0.00027142	1.1276	0.00059573	528.3282862703935	66.622	1.4169	68.511	68.182	69.599	1.8889					114	45	4	0	0	0	0.039278	5	27896	27852;27896;27935;27975;28026		76.825	16.837	1	60728000			5584	561	2751	2769	6880;6881;6882;6883;6884	6881					0.11753265039214966
FLENETWEL	9	Unmodified	_FLENETWEL_					0	0	0		ENST00000471188.5_1_7:92887656-92969983:+|nuORF;ENST00000441602.5_1_7:92883193-92979232:+|nuORF;nc|ENSG00000004766|Q96JG6-3|VPS50;ENSG00000004766|ENST00000305866|VPS50	ENST00000471188.5_1_7:92887656-92969983:+|nuORF	ENST00000471188.5_1_7:92887656-92969983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.7796508669853	2	590.779679	1179.5448	2.9924	0.0017678	-1.7539	-0.0010362	1.2385	0.00073165	590.7788127058949	70.38	0.32146	71.734	71.584	71.906	1.3536					15	9	2	0	0	0	0.1109	1	29533	29533		45.7	15.859	1	1227400			5585	473	2752	2770	6885	6885					-0.03778588347427103
FLENETWEL	9	Unmodified	_FLENETWEL_					0	0	0		ENST00000471188.5_1_7:92887656-92969983:+|nuORF;ENST00000441602.5_1_7:92883193-92979232:+|nuORF;nc|ENSG00000004766|Q96JG6-3|VPS50;ENSG00000004766|ENST00000305866|VPS50	ENST00000471188.5_1_7:92887656-92969983:+|nuORF	ENST00000471188.5_1_7:92887656-92969983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.7786743044853	2	590.779679	1179.5448	2.7995	0.0016539	-2.0921	-0.001236	0.70742	0.00041793	590.7780611233945	69.865	0.31961	71.703	71.562	71.881	1.8378					14	9	2	0	0	0	0.22154	1	29322	29322		30.637	10.222	1	1291600			5586	473	2752	2770	6886	6886					-0.03778588347427103
FLFDEEMEQM	10	Unmodified	_FLFDEEMEQM_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;nc|ENSG00000155506|Q6PKG0-3|LARP1	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.7734252810478	2	659.770139	1317.52573	2.636	0.0017391	-0.35834	-0.00023643	2.2776	0.0015027	659.7699656669829	75.178	0.39501	76.484	76.311	76.706	1.3063					24	12	3	0	0	0	0.32206	1	31561	31561		37.974	27.15	1	1395500			5587	3422	2753	2771	6887	6887					-0.12033629025017945
FLFDEEMEQM	10	Unmodified	_FLFDEEMEQM_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;nc|ENSG00000155506|Q6PKG0-3|LARP1	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.7720825076103	2	659.770139	1317.52573	2.7176	0.001793	-1.0777	-0.00071103	1.6399	0.0010819	659.7697494876828	74.78	0.24817	76.561	76.42	76.668	1.7817					14	7	3	0	0	0	0.51515	1	31375	31375		26.884	7.6267	1	1247100			5588	3422	2753	2771	6888	6888					-0.12033629025017945
FLFDGSPTYVL	11	Unmodified	_FLFDGSPTYVL_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8240234255791	2	629.821347	1257.62814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.358	1	89.414	88.914	89.914	1.0562								0	0	0	0.63772	1	37255	37255		10.074	2.1638	1				5589	4107	2754	2772	6889	6889					0.009631481004362286
FLFDHLLTL	9	Unmodified	_FLFDHLLTL_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8179809451103	2	559.815867	1117.61718	4.1952	0.0023486	-2.7233	-0.0015246	1.4719	0.00082398	559.8142523611587	91.586	0.46132	92.523	92.307	92.769	0.93624					35	14	4	0	0	0	0.018723	2	38536	38536;38587		100.37	25.949	1	3572400			5590	3228	2755	2773	6890;6891	6890					0.06307790516802925
FLFDHLLTL	9	Unmodified	_FLFDHLLTL_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	559.815867	1117.61718	1.4806	0.00082884	-0.0097646	-5.4664E-06	1.4708	0.00082338	559.8163276002452	92.933	0.33656	92.933	92.801	93.138	0	0.30268	0.0015748	NaN	100.37	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1037300			5591	3228	2755	2773							0.06307790516802925
FLFDHLLTL	9	Unmodified	_FLFDHLLTL_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	559.815867	1117.61718	2.5898	0.0014498	-2.4269	-0.0013586	0.1629	9.1196E-05	559.8150933647319	92.444	0.30167	92.612	92.473	92.775	0.16835	-0.01886	-0.0011315	NaN	100.37	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	816170			5592	3228	2755	2773							0.06307790516802925
FLFDHLLTL	9	Unmodified	_FLFDHLLTL_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	559.815867	1117.61718	3.4647	0.0019396	-0.26626	-0.00014905	3.1985	0.0017906	559.8155258433841	91.089	0.40572	92.455	92.28	92.686	1.366	-0.17556	0.0012877	NaN	100.37	33	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3175500			5593	3228	2755	2773							0.06307790516802925
FLFDTQHFI	9	Unmodified	_FLFDTQHFI_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	584.3580810427666	2	584.295299	1166.57605	1.8928	0.001106	1.182	0.00069064	3.0748	0.0017966	584.2961753259486	74.456	0.2874	74.456	74.27	74.557	0					14	8	3	0	0	0	0.11749	1	30991	30991		6.7232	2.3939	1	556790			5594	2062	2756	2774	6892	6892					-0.0005797052269826963
FLFDTQHFI	9	Unmodified	_FLFDTQHFI_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	584.295299	1166.57605	3.4451	0.002013	-0.86543	-0.00050567	2.5797	0.0015073	584.2943420163281	72.854	0.37523	74.184	74.036	74.412	1.3298	-0.10369	-0.00058211	NaN	15.847	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2142600			5595	2062	2756	2774							-0.0005797052269826963
FLFDTQHFI	9	Unmodified	_FLFDTQHFI_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	584.295299	1166.57605	2.6407	0.0015429	-1.5249	-0.00089101	1.1157	0.00065191	584.2942199526437	72.404	0.37401	74.214	74.011	74.385	1.8101	-0.073777	-0.0013528	NaN	15.847	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2197400			5596	2062	2756	2774							-0.0005797052269826963
FLFELPSRL	9	Unmodified	_FLFELPSRL_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3213378787041	2	561.321317	1120.62808	1.3003	0.0007299	-1.582	-0.00088802	-0.28169	-0.00015812	561.3200981336869	79.129	0.23892	79.129	78.968	79.206	0					13	7	2	0	0	0	0.57699	1	32967	32967		12.241	2.8932	1	702000			5597	3253	2757	2775	6893	6893					0.07259192891069688
FLFELPSRL	9	Unmodified	_FLFELPSRL_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3223754763603	2	561.321317	1120.62808	1.6624	0.00093311	0.56215	0.00031555	2.2245	0.0012487	561.3217631327043	78.486	0.28497	78.795	78.61	78.895	0.30933					14	8	2	0	0	0	0.50272	1	32819	32819		15.248	0.66679	1	670050			5598	3253	2757	2775	6894	6894					0.07259192891069688
FLFELPSRL	9	Unmodified	_FLFELPSRL_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3245117068291	2	561.321317	1120.62808	2.5353	0.0014231	1.5266	0.00085693	4.0619	0.00228	561.3222443367605	77.472	0.31829	78.753	78.631	78.95	1.2809					22	9	3	0	0	0	0.040497	2	32509	32509;32560		75.761	39.634	1	2156600			5599	3253	2757	2775	6895;6896	6895					0.07259192891069688
FLFELPSRL	9	Unmodified	_FLFELPSRL_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3236572146416	2	561.321317	1120.62808	1.8022	0.0010116	1.5098	0.00084746	3.3119	0.001859	561.3218559649476	76.982	0.29045	78.735	78.593	78.884	1.7529					20	8	3	0	0	0	0.086433	2	32260	32260;32312		53.833	22.551	1	2124500			5600	3253	2757	2775	6897;6898	6897					0.07259192891069688
FLFEPVVKA	9	Unmodified	_FLFEPVVKA_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3079101443291	2	525.305136	1048.59572	2.2044	0.001158	0.52222	0.00027432	2.7266	0.0014323	525.3058936378527	59.508	0.26427	59.508	59.322	59.587	0					15	8	3	0	0	0	0.25667	1	24791	24791		27.629	9.4825	1	1306500			5601	1303	2758	2776	6899	6899					0.07336405488103992
FLFEPVVKA	9	Unmodified	_FLFEPVVKA_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3057739138603	2	525.305136	1048.59572	2.655	0.0013947	-0.16327	-8.5764E-05	2.4918	0.0013089	525.3049379961681	58.907	0.26685	59.232	59.056	59.323	0.32553					15	8	3	0	0	0	0.22154	2	24704	24655;24704		30.637	15.798	1	1420200			5602	1303	2758	2776	6900;6901	6901					0.07336405488103992
FLFFILVAVR	10	Unmodified	_FLFFILVAVR_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;ENST00000525238.2_1_19:1041360-1041637:+|nuORF;ENST00000527496.1_1_19:1041282-1041972:+|nuORF;ENST00000526885.5_1_19:1041282-1042570:+|nuORF	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.9236022830009	3	408.921627	1223.74305	3.2781	0.0013405	-0.059722	-2.4422E-05	3.2184	0.0013161	408.92148584637783	91.366	0.55666	92.732	92.406	92.963	1.366					57	17	4	0	0	0	0.89803	1	38392	38392		0.15932	0	1	15548000			5603	777	2759	2777	6902	6902					0.14012922092865665
FLFGEEPSKL	10	Unmodified	_FLFGEEPSKL_					0	0	0		nc|ENSG00000176915|Q86XL3-3|ANKLE2;DHX30-ANKLE2|1|fusion;ENSG00000176915|ENST00000357997|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.8102294802666	2	583.808239	1165.60193	1.9599	0.0011442	0.79975	0.0004669	2.7597	0.0016111	583.8091316824392	55.398	0.3167	55.719	55.516	55.833	0.32088					18	9	3	0	0	0	0.80702	1	23176	23176		11.495	0.38025	1	361670			5604	407	2760	2778	6903	6903					0.025748789289536944
FLFGEEPSKL	10	Unmodified	_FLFGEEPSKL_					0	0	0		nc|ENSG00000176915|Q86XL3-3|ANKLE2;DHX30-ANKLE2|1|fusion;ENSG00000176915|ENST00000357997|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8126098513603	2	583.808239	1165.60193	0.64645	0.0003774	1.815	0.0010596	2.4615	0.001437	583.8083911944324	53.44	0.5185	55.41	55.234	55.752	1.9697					34	16	3	0	0	0	0.6796	1	22469	22469		19.362	2.2754	1	2216300			5605	407	2760	2778	6904	6904					0.025748789289536944
FLFGEEPSKL	10	Unmodified	_FLFGEEPSKL_					0	0	0		nc|ENSG00000176915|Q86XL3-3|ANKLE2;DHX30-ANKLE2|1|fusion;ENSG00000176915|ENST00000357997|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	nc|ENSG00000176915|Q86XL3-3|ANKLE2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	583.808239	1165.60193	1.9285	0.0011259	1.2847	0.00075	3.2132	0.0018759	583.8090052858932	55.919	0.11951	55.919	55.851	55.97	0	0.10031	0.00021432	NaN	11.495	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	371400			5606	407	2760	2778							0.025748789289536944
FLFGYPKRL	9	Unmodified	_FLFGYPKRL_					0	0	0		ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8907653689384	3	380.890327	1139.64915	1.0507	0.00040021	-0.026716	-1.0176E-05	1.024	0.00039003	380.89037685761633	46.549	1.0053	47.924	47.617	48.623	1.3751					68	31	3	0	0	0	0.30098	1	19538	19538		18.373	4.467	1	2264000			5607	4443	2761	2779	6905	6905					0.08491202990603597
FLFGYPKRL	9	Unmodified	_FLFGYPKRL_					0	0	0		ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	380.890327	1139.64915	1.0783	0.0004107	-0.082931	-3.1588E-05	0.99533	0.00037911	380.8903965403874	46.064	0.77072	48.034	47.758	48.529	1.9703	0.055004	-3.2609E-05	NaN	18.373	57	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2399800			5608	4443	2761	2779							0.08491202990603597
FLFIVINTLW	10	Unmodified	_FLFIVINTLW_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3702270388603	2	633.368267	1264.72198	1.0752	0.000681	1.8197	0.0011526	2.8949	0.0018336	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	0.87699	1	33830	33830		3.9444	0.3479	1	5927400	+		5609	14858	2762	2780	6906	6906					0.10020911993365189
FLFLMLMLL	9	Unmodified	_FLFLMLMLL_					0	0	0			REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|302|2|anti-sense	REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|302|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8895446658134	3	380.89017	1139.64868	1.0783	0.0004107	0.32752	0.00012475	1.4058	0.00053545	380.8903965403874	46.064	0.77072	48.034	47.758	48.529	1.9703					57	24	3	0	0	0	0.39097	1	19273	19273		13.906	0	1	2399800	+		5610	14327	2763	2781	6907	6907					0.08444323954881838
FLFNKVVNL	9	Unmodified	_FLFNKVVNL_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3246337771416	2	547.32386	1092.63317	1.3814	0.00075608	0.95973	0.00052528	2.3411	0.0012814	547.3243786853768	67.313	0.45322	67.313	67.116	67.569	0					32	14	3	0	0	0	0.023786	3	28037	27992;28037;28092		96.285	32.048	1	4614300			5611	2085	2764	2782	6908;6909;6910	6909					0.0905549675369457
FLFNKVVNL	9	Unmodified	_FLFNKVVNL_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3251220583916	2	547.32386	1092.63317	1.8575	0.0010166	0.22588	0.00012363	2.0834	0.0011403	547.3240347038511	66.756	0.34328	67.081	66.907	67.25	0.32449					27	10	4	0	0	0	0.00025648	2	27958	27916;27958		139.54	84.77	1	4075700			5612	2085	2764	2782	6911;6912	6912					0.0905549675369457
FLFNKVVNL	9	Unmodified	_FLFNKVVNL_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3251830935478	2	547.32386	1092.63317	2.5047	0.0013709	0.22132	0.00012114	2.726	0.001492	547.3238945209115	65.467	0.48935	66.866	66.663	67.152	1.3989					27	15	2	0	0	0	2.1581E-05	2	27472	27422;27472		171.47	110.11	1	11463000			5613	2085	2764	2782	6913;6914	6914					0.0905549675369457
FLFNKVVNL	9	Unmodified	_FLFNKVVNL_					0	0	0		ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	ENSG00000119801|ENST00000261353|YPEL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3248168826103	2	547.32386	1092.63317	1.8121	0.00099178	0.24635	0.00013483	2.0584	0.0011266	547.323991222086	65.022	0.43642	66.93	66.72	67.157	1.9085					23	13	2	0	0	0	0.00025648	2	27285	27239;27285		139.54	84.77	1	9564000			5614	2085	2764	2782	6915;6916	6916					0.0905549675369457
FLFNNLKYKRV	11	Unmodified	_FLFNNLKYKRV_					0	0	0		ENST00000370382.7_2_1:92546128-92605069:+|nuORF	ENST00000370382.7_2_1:92546128-92605069:+|nuORF	ENST00000370382.7_2_1:92546128-92605069:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2852661013603	3	481.281995	1440.82415	5.4031	0.0026004	3.0427	0.0014644	8.4459	0.0040648	481.28311030345975	88.282	1.2053	89.338	88.518	89.723	1.0562					102	37	3	0	0	0	1.0388	1	37210	37210		0.50596	0.051438	1	3007300			5615	6113	2765	2783	6917	6917					0.12137578064948684
FLFNTENKL	9	Unmodified	_FLFNTENKL_					0	0	0		ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1	ENSG00000067064|ENST00000381344|IDI1	ENSG00000067064|ENST00000381344|IDI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.8373290896416	2	563.300581	1124.58661	1.5794	0.0008897	-0.46825	-0.00026377	1.1112	0.00062594	563.3001340402527	51.393	0.155	51.393	51.261	51.416	0					7	4	2	0	0	0	0.63129	1	21394	21394		10.074	0.72649	1	271530			5616	817	2766	2784	6918	6918					0.029300121317419325
FLFNTENKL	9	Unmodified	_FLFNTENKL_					0	0	0		ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1	ENSG00000067064|ENST00000381344|IDI1	ENSG00000067064|ENST00000381344|IDI1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	563.300581	1124.58661	1.6308	0.00091865	-0.3561	-0.00020059	1.2747	0.00071806	563.8018649653229	50.837	0.24776	51.165	50.981	51.229	0.32824	-0.11385	5.3843E-05	NaN	10.074	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347590			5617	817	2766	2784							0.029300121317419325
FLFNVSPIL	9	Unmodified	_FLFNVSPIL_					0	0	0		tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3051635622978	2	525.305136	1048.59572	0.69073	0.00036285	-2.9363	-0.0015424	-2.2456	-0.0011796	525.3050438266298	57.046	0.25125	59.014	58.874	59.126	1.9684					16	12	2	0	0	0	0.15635	1	23909	23909		37.974	3.5723	1	4371400			5618	16343	2767	2785	6919	6919					0.07336405488103992
FLFNVSPIL	9	Unmodified	_FLFNVSPIL_					0	0	0		tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	525.305136	1048.59572	0.47291	0.00024842	-2.8389	-0.0014913	-2.366	-0.0012429	525.3047688344201	57.673	0.13919	59.091	58.991	59.131	1.4181	-0.12055	-0.0024111	NaN	37.974	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5028700			5619	16343	2767	2785							0.07336405488103992
FLFPRSIDV	9	Unmodified	_FLFPRSIDV_					0	0	0		ENST00000420833.5_1_7:12258097-12270062:+|nuORF;ENSG00000106460|ENST00000396668|TMEM106B	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3061401247978	2	547.305667	1092.59678	1.5374	0.00084143	-0.13948	-7.6339E-05	1.3979	0.00076509	547.3054797371283	65.129	0.40813	65.129	64.881	65.289	0					44	12	4	0	0	0	0.02878	2	27155	27106;27155		89.401	34.702	1	10175000			5620	1569	2768	2786	6920;6921	6921					0.05418619856982332
FLFPRSIDV	9	Unmodified	_FLFPRSIDV_					0	0	0		ENST00000420833.5_1_7:12258097-12270062:+|nuORF;ENSG00000106460|ENST00000396668|TMEM106B	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3058349490166	2	547.305667	1092.59678	1.9024	0.0010412	-0.79313	-0.00043408	1.1093	0.0006071	547.3050733158309	64.561	0.44373	64.89	64.658	65.102	0.32899					42	13	4	0	0	0	0.02878	3	27074	26990;27034;27074		89.401	33.224	1	12316000			5621	1569	2768	2786	6922;6923;6924	6924					0.05418619856982332
FLFPRSIDV	9	Unmodified	_FLFPRSIDV_					0	0	0		ENST00000420833.5_1_7:12258097-12270062:+|nuORF;ENSG00000106460|ENST00000396668|TMEM106B	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3045532107353	2	547.305667	1092.59678	2.4274	0.0013285	-1.7739	-0.00097086	0.65354	0.00035768	547.3046390307478	63.306	0.77676	64.72	64.502	65.278	1.4134					58	24	4	0	0	0	0.036104	4	26499	26477;26499;26546;26585		79.596	23.419	1	19047000			5622	1569	2768	2786	6925;6926;6927;6928	6926					0.05418619856982332
FLFPRSIDV	9	Unmodified	_FLFPRSIDV_					0	0	0		ENST00000420833.5_1_7:12258097-12270062:+|nuORF;ENSG00000106460|ENST00000396668|TMEM106B	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	ENST00000420833.5_1_7:12258097-12270062:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3104736208916	2	547.305667	1092.59678	2.6008	0.0014234	-1.5954	-0.00087316	1.0054	0.00055025	547.3046939366476	62.684	0.3753	64.628	64.469	64.845	1.9444					37	11	4	0	0	0	0.023685	3	26269	26269;26310;26350		96.367	48.618	1	17459000			5623	1569	2768	2786	6929;6930;6931	6929					0.05418619856982332
FLFQEPRSI	9	Unmodified	_FLFQEPRSI_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8099853396416	2	568.808574	1135.60259	-0.29201	-0.0001661	-2.2024	-0.0012528	-2.4945	-0.0014189	568.8075111244029	51.026	0.26918	53.002	52.788	53.057	1.9753					15	9	2	0	0	0	0.057024	2	21402	21356;21402		65.235	27.084	1	4908700			5624	3736	2769	2787	6932;6933	6933					0.04021718368676375
FLFRLCKKL	9	Unmodified	_FLFRLCKKL_					0	0	0		nc|ENSG00000104450|Q07617-2|SPAG1	nc|ENSG00000104450|Q07617-2|SPAG1	nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3580810427666	2	584.357179	1166.69981	1.9193	0.0011216	-1.2945	-0.00075645	0.62479	0.0003651	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.82604	4	30991	30991;31044;31094;31249		2.3027	0	1	6168700			5625	7846	2770	2788	6934;6935;6936;6937	6934					0.12312409043943262
FLFRNHLV	8	Unmodified	_FLFRNHLV_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.7983886599541	2	523.300719	1044.58688	1.8032	0.00094361	4.4113	0.0023084	6.2145	0.003252	523.3044131664843	54.34	0.51231	55.745	55.291	55.803	1.4048					24	16	3	0	0	0	2.3239	1	22718	22718		17.087	3.5787	1	1747300			5626	3385	2771	2789	6938	6938					0.06637476642254114
FLFRSFFLIIR	11	Unmodified	_FLFRSFFLIIR_					0	0	0			REV__ENST00000353801.7_1_6:44214858-44216363:+|nuORF	REV__ENST00000353801.7_1_6:44214858-44216363:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.9603454470634	3	486.958852	1457.85473	2.3899	0.0011638	0.86611	0.00042176	3.256	0.0015855	486.9592425722195	88.983	1.9506	88.983	88.274	90.225	0					145	61	3	0	0	0	1.0402	1	37603	37603		0.094841	0	1	2426300	+		5627	12533	2772	2790	6939	6939					0.1441135645002305
FLFRVPVP	8	Unmodified	_FLFRVPVP_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF;REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7982360720634	2	487.794738	973.574923	2.0635	0.0010066	1.2817	0.0006252	3.3452	0.0016318	487.79511345666344	69.593	0.18671	69.915	69.847	70.034	0.32224					8	5	2	0	0	0	0.89008	1	29131	29131		2.5775	0	1	547360	+		5628	12992;10754	2773	2791	6940	6940					0.08707859899084269
FLFSKFIEL	9	Unmodified	_FLFSKFIEL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1;ENST00000496932.1_1_1:43830369-43830754:-|nuORF;ENST00000468865.6_1_1:43829752-43830910:-|nuORF;ENST00000464204.5_1_1:43830107-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	572.3268310427666	2	572.326068	1142.63758	2.4417	0.0013974	-1.6208	-0.00092764	0.82083	0.00046978	572.3253409656788	86.264	0.38708	86.264	86.132	86.519	0					27	12	3	0	0	0	0.10473	2	35977	35926;35977		47.749	20.865	1	2909500			5629	804	2774	2792	6941;6942	6942					0.07196961176623518
FLFSKFIEL	9	Unmodified	_FLFSKFIEL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1;ENST00000496932.1_1_1:43830369-43830754:-|nuORF;ENST00000468865.6_1_1:43829752-43830910:-|nuORF;ENST00000464204.5_1_1:43830107-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	572.3277465701103	2	572.326068	1142.63758	2.4548	0.001405	-0.29617	-0.00016951	2.1587	0.0012355	572.3258314003969	85.63	0.46559	85.883	85.665	86.13	0.25227					38	14	4	0	0	0	0.18337	2	35784	35784;35830		34.932	9.5328	1	2540000			5630	804	2774	2792	6943;6944	6943					0.07196961176623518
FLFSKFIEL	9	Unmodified	_FLFSKFIEL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1;ENST00000496932.1_1_1:43830369-43830754:-|nuORF;ENST00000468865.6_1_1:43829752-43830910:-|nuORF;ENST00000464204.5_1_1:43830107-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3272582888603	2	572.326068	1142.63758	2.0203	0.0011563	-0.46615	-0.00026679	1.5541	0.00088948	572.3258092224279	84.665	0.49335	85.824	85.655	86.148	1.159					38	15	3	0	0	0	0.071837	1	35508	35508		59.368	7.1	1	6908400			5631	804	2774	2792	6945	6945					0.07196961176623518
FLFSKFIEL	9	Unmodified	_FLFSKFIEL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1;ENST00000496932.1_1_1:43830369-43830754:-|nuORF;ENST00000468865.6_1_1:43829752-43830910:-|nuORF;ENST00000464204.5_1_1:43830107-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3270751833916	2	572.326068	1142.63758	2.1953	0.0012564	-0.55544	-0.00031789	1.6398	0.00093851	572.3257409591491	84.17	0.45354	85.808	85.59	86.044	1.6379					37	14	4	0	0	0	0.042285	2	35273	35273;35327		74.2	28.179	1	5223400			5632	804	2774	2792	6946;6947	6946					0.07196961176623518
FLFTSHLDSL	10	Unmodified	_FLFTSHLDSL_					0	0	0		nc|ENSG00000078487|Q9H0M4-3|ZCWPW1;ENST00000490089.1_1_7:99998800-100014813:-|nuORF;ZCWPW1|p.M406Hfs*6|1|0.06|ENSG00000078487|chr7:100405020-100405048|CTGATCTGTTCTGCCTCTTGAGCCATCAT/-|frameshift_variant;nc|ENSG00000078487|Q9H0M4-2|ZCWPW1;nc|ENSG00000078487|Q9H0M4-4|ZCWPW1;nc|ENSG00000078487|Q9H0M4-5|ZCWPW1;nc|ENSG00000078487|Q9H0M4|ZCWPW1;ENSG00000078487|ENST00000684423|ZCWPW1	nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	nc|ENSG00000078487|Q9H0M4-3|ZCWPW1	MSMS	GG20161007_CRH_Patient100_W632_01	3	590.3074828982353	2	590.305864	1178.59717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.515	1	97.8	97.3	98.3	0.28442								0	0	0	0.031633	1	41036	41036		48.346	4.4876	1				5633	977	2775	2793	6948	6948					0.015019947861901528
FLGAIFQL	8	Unmodified	_FLGAIFQL_					0	0	0		ENSG00000101363|ENST00000373606|MANBAL	ENSG00000101363|ENST00000373606|MANBAL	ENSG00000101363|ENST00000373606|MANBAL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	908.5369750857353	1	908.524016	907.516739	3.7827	0.0034367	0.60288	0.00054773	4.3856	0.0039844	908.5218496160628	91.024	0.22326	92.006	91.878	92.102	0.98157					8	6	2	0	0	0	0.52797	1	38357	38357		45.75	9.2838	1	607820			5634	1341	2776	2794	6949	6949					0.05928178253793703
FLGDDVFLREL	11	Unmodified	_FLGDDVFLREL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.3524047732353	2	662.350803	1322.68705	2.3567	0.001561	-0.6518	-0.00043172	1.7049	0.0011293	662.3501057776427	78.072	0.39002	79.353	79.167	79.557	1.2809					27	12	3	0	0	0	0.037522	1	32769	32769		72.59	47.19	1	3261500			5635	1284	2777	2795	6950	6950					0.03861624394744467
FLGDDVFLREL	11	Unmodified	_FLGDDVFLREL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	662.3481933474541	2	662.350803	1322.68705	1.0884	0.0007209	-2.9717	-0.0019683	-1.8833	-0.0012474	662.3492073257111	77.568	0.29943	79.319	79.167	79.467	1.7514					20	9	3	0	0	0	0.093993	1	32535	32535		57.204	27.363	1	2357000			5636	1284	2777	2795	6951	6951					0.03861624394744467
FLGDDVFLREL	11	Unmodified	_FLGDDVFLREL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	662.350803	1322.68705	2.0253	0.0013415	-1.1177	-0.00074031	0.90764	0.00060117	662.8524130890041	79.655	0.27986	79.655	79.453	79.733	0	0.24667	-4.5652E-05	NaN	72.59	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	380100			5637	1284	2777	2795							0.03861624394744467
FLGDDVFLREL	11	Unmodified	_FLGDDVFLREL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	662.350803	1322.68705	1.6265	0.0010773	-0.3963	-0.00026249	1.2302	0.0008148	662.3498379345519	78.998	0.27624	79.307	79.167	79.443	0.30932	-0.10139	0.00090999	NaN	72.59	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	564370			5638	1284	2777	2795							0.03861624394744467
FLGDLSHLL	9	Unmodified	_FLGDLSHLL_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF	ENSG00000105438|ENST00000330720|KDELR1	ENSG00000105438|ENST00000330720|KDELR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7841369509697	2	507.784567	1013.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.448	1	76.448	75.948	76.948	0								0	0	0	0.35192	1	31827	31827		13.508	0	1				5639	1518	2778	2796	6952	6952					0.048346444486242035
FLGDLSHLL	9	Unmodified	_FLGDLSHLL_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF	ENSG00000105438|ENST00000330720|KDELR1	ENSG00000105438|ENST00000330720|KDELR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7857849001884	2	507.784567	1013.55458	2.6256	0.0013332	-0.81724	-0.00041498	1.8083	0.00091825	507.78439701730025	75.91	0.37674	76.231	75.988	76.364	0.32164					20	11	2	0	0	0	0.19075	2	31702	31702;31755		34.102	12.356	1	662810			5640	1518	2778	2796	6953;6954	6953					0.048346444486242035
FLGDLSHLL	9	Unmodified	_FLGDLSHLL_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF	ENSG00000105438|ENST00000330720|KDELR1	ENSG00000105438|ENST00000330720|KDELR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7868530154228	2	507.784567	1013.55458	3.4656	0.0017598	-2.0029	-0.001017	1.4628	0.00074277	507.78465190208595	74.783	0.43291	76.09	75.847	76.28	1.3063					29	13	3	0	0	0	0.069258	2	31376	31376;31429		60.39	15.983	1	1955700			5641	1518	2778	2796	6955;6956	6955					0.048346444486242035
FLGDLSHLL	9	Unmodified	_FLGDLSHLL_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF	ENSG00000105438|ENST00000330720|KDELR1	ENSG00000105438|ENST00000330720|KDELR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7863036990166	2	507.784567	1013.55458	3.0604	0.001554	-1.9203	-0.00097509	1.1401	0.00057893	507.7846716110146	74.302	0.44211	76.098	75.929	76.371	1.7962					31	13	3	0	0	0	0.09539	2	31163	31163;31220		50.855	20.63	1	1810400			5642	1518	2778	2796	6957;6958	6957					0.048346444486242035
FLGEFATDI	9	Unmodified	_FLGEFATDI_					0	0	0		nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;ENSG00000104413|ENST00000433389|ESRP1	nc|ENSG00000104413|Q6NXG1-2|ESRP1	nc|ENSG00000104413|Q6NXG1-2|ESRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.500170886517	1	1012.49859	1011.49131	2.1879	0.0022152	-1.4377	-0.0014557	0.75019	0.00075957	1012.4979495311006	69.841	0.34528	71.194	70.99	71.336	1.3536					21	10	3	0	0	0	0.013238	1	29285	29285		104.8	40.563	1	1798100			5643	1462	2779	2797	6959	6959					-0.01397341059282553
FLGEFATDI	9	Unmodified	_FLGEFATDI_					0	0	0		nc|ENSG00000104413|Q6NXG1-2|ESRP1;nc|ENSG00000104413|Q6NXG1-5|ESRP1;nc|ENSG00000104413|Q6NXG1-4|ESRP1;nc|ENSG00000104413|Q6NXG1-3|ESRP1;ENSG00000104413|ENST00000433389|ESRP1	nc|ENSG00000104413|Q6NXG1-2|ESRP1	nc|ENSG00000104413|Q6NXG1-2|ESRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.50108641386	1	1012.49859	1011.49131	1.9068	0.0019307	-1.2604	-0.0012762	0.64639	0.00065447	1012.4986822685091	69.33	0.31485	71.183	71.009	71.324	1.853					21	9	3	0	0	0	0.059546	2	29063	29063;29110		64.236	26.262	1	1602600			5644	1462	2779	2797	6960;6961	6960					-0.01397341059282553
FLGENISNFL	10	Unmodified	_FLGENISNFL_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.2989990115166	2	577.298039	1152.58152	2.353	0.0013584	-0.29129	-0.00016816	2.0617	0.0011902	577.2974845533781	84.748	0.3505	84.748	84.558	84.909	0					26	10	3	0	0	0	0.28905	2	35338	35289;35338		39.95	7.5446	1	2323100			5645	1265	2780	2798	6962;6963	6963					0.011337082691625255
FLGENISNFL	10	Unmodified	_FLGENISNFL_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.2996703982353	2	577.298039	1152.58152	2.3652	0.0013654	0.50108	0.00028927	2.8662	0.0016547	577.2981687066477	84.271	0.38261	84.532	84.343	84.726	0.26083					28	11	4	0	0	0	0.16044	2	35257	35209;35257		53.833	8.1332	1	2373600			5646	1265	2780	2798	6964;6965	6965					0.011337082691625255
FLGENISNFL	10	Unmodified	_FLGENISNFL_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.2991821169853	2	577.298039	1152.58152	1.8829	0.001087	0.39474	0.00022788	2.2776	0.0013149	577.2982546969979	83.425	0.56633	84.613	84.42	84.987	1.1879					34	17	3	0	0	0	0.061547	3	35036	34987;35036;35081		118.89	33.538	1	7967800			5647	1265	2780	2798	6966;6967;6968	6967					0.011337082691625255
FLGENISNFL	10	Unmodified	_FLGENISNFL_					0	0	0		nc|ENSG00000100342|O14791-3|APOL1;ENSG00000100342|ENST00000397278|APOL1;nc|ENSG00000100342|O14791-2|APOL1	nc|ENSG00000100342|O14791-3|APOL1	nc|ENSG00000100342|O14791-3|APOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.2985107302666	2	577.298039	1152.58152	2.3271	0.0013434	-0.92695	-0.00053513	1.4001	0.0008083	577.297264431769	82.962	0.53526	84.632	84.415	84.95	1.67					32	16	3	0	0	0	0.057925	2	34813	34763;34813		92.491	33.813	1	6452900			5648	1265	2780	2798	6969;6970	6970					0.011337082691625255
FLGFFFLSL	9	Unmodified	_FLGFFFLSL_					0	0	0			REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8024169802666	2	545.802229	1089.5899	2.4149	0.0013181	-1.9603	-0.0010699	0.45458	0.00024811	545.8008582443739	76.672	0.59293	77.966	77.575	78.168	1.2938					36	18	3	0	0	0	0.18999	1	32159	32159		34.187	0.084896	1	1874500	+		5649	12181	2781	2799	6971	6971					0.04869306976434018
FLGFFFLSL	9	Unmodified	_FLGFFFLSL_					0	0	0			REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	545.802229	1089.5899	1.5066	0.0008223	-3.1184	-0.001702	-1.6118	-0.00087973	545.8004090440323	78.299	0.22002	78.299	78.189	78.409	0	0.2888	-0.00012234	NaN	34.187	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384690	+		5650	12181	2781	2799							0.04869306976434018
FLGFFFLSL	9	Unmodified	_FLGFFFLSL_					0	0	0			REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	545.802229	1089.5899	2.4149	0.0013181	-1.9603	-0.0010699	0.45458	0.00024811	545.8008582443739	76.672	0.59293	77.966	77.575	78.168	1.2938	-0.044024	0.0011418	NaN	34.187	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1874500	+		5651	12181	2781	2799							0.04869306976434018
FLGFFFLSL	9	Unmodified	_FLGFFFLSL_					0	0	0			REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	REV__ENST00000260970.7_1_2:170440931-170460199:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	545.802229	1089.5899	2.7422	0.0014967	-3.0997	-0.0016918	-0.35752	-0.00019513	545.8011741047254	75.997	0.62231	77.765	77.568	78.19	1.7672	-0.24537	-0.00010197	NaN	34.187	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1635400	+		5652	12181	2781	2799							0.04869306976434018
FLGGFRHKV	9	Unmodified	_FLGGFRHKV_					0	0	0		nc|ENSG00000164675|Q8NA54-2|IQUB;IQUB|p.K597Hfs*3|1|0.12|ENSG00000164675|chr7:123461575-123461576|-/ATGTATG|frameshift_variant;ENSG00000164675|ENST00000324698|IQUB	nc|ENSG00000164675|Q8NA54-2|IQUB	nc|ENSG00000164675|Q8NA54-2|IQUB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8116943240166	2	530.806168	1059.59778	1.3711	0.0007278	-0.79268	-0.00042076	0.57844	0.00030704	530.8058882480352	56.646	0.67963	58.06	57.658	58.338	1.4145					70	21	5	0	0	0	0.15478	1	23636	23636		38.151	0.17718	1	54351000			5653	3791	2782	2800	6972	6972					0.07036879016550301
FLGGVFVV	8	Unmodified	_FLGGVFVV_					0	0	0		ENST00000539663.5_1_12:21661040-21668177:+|nuORF;ENSG00000111711|ENST00000229314|GOLT1B	ENST00000539663.5_1_12:21661040-21668177:+|nuORF	ENST00000539663.5_1_12:21661040-21668177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	837.4896118044853	1	837.486902	836.479626	3.1717	0.0026563	0.3193	0.00026741	3.491	0.0029237	837.4867729631242	81.479	0.30975	82.712	82.564	82.873	1.2332					17	9	2	0	0	0	0.67839	1	34234	34234		32.454	8.2437	1	1084900			5654	1751	2783	2801	6973	6973					0.054845067080464105
FLGGVFVV	8	Unmodified	_FLGGVFVV_					0	0	0		ENST00000539663.5_1_12:21661040-21668177:+|nuORF;ENSG00000111711|ENST00000229314|GOLT1B	ENST00000539663.5_1_12:21661040-21668177:+|nuORF	ENST00000539663.5_1_12:21661040-21668177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	837.4879028201103	1	837.486902	836.479626	2.4623	0.0020621	1.5003	0.0012565	3.9626	0.0033186	837.4881245297167	81.036	0.28152	82.731	82.517	82.798	1.6959					12	8	2	0	0	0	0.67839	1	33974	33974		32.454	8.2437	1	1216400			5655	1751	2783	2801	6974	6974					0.054845067080464105
FLGIAAPKPDL	11	Unmodified	_FLGIAAPKPDL_					0	0	0		ENSG00000269067|ENST00000594710|ZNF728	ENSG00000269067|ENST00000594710|ZNF728	ENSG00000269067|ENST00000594710|ZNF728	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.3384887576103	2	571.334424	1140.6543	2.0049	0.0011455	1.0181	0.00058169	3.023	0.0017271	571.335218764874	71.997	0.37662	73.338	73.153	73.53	1.3415					15	11	2	0	0	0	0.89563	1	30222	30222		10.074	1.4806	1	1157800			5656	5442	2784	2802	6975	6975					0.08959462062580315
FLGLETAKLL	10	Unmodified	_FLGLETAKLL_					0	0	0			REV__ENSG00000113211|ENST00000231136|PCDHB6	REV__ENSG00000113211|ENST00000231136|PCDHB6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.8008300662041	2	552.8368	1103.65905	0.56473	0.0003122	2.5993	0.001437	3.1641	0.0017492	552.8382518780425	53.057	0.35268	54.457	54.281	54.633	1.4005					28	10	3	0	0	0	0.1072	1	22265	22265		52.268	4.5197	1	7993400	+		5657	9376	2785	2803	6976	6976					0.11136346205330483
FLGMKVLIAW	10	Unmodified	_FLGMKVLIAW_					0	0	0		ENST00000542902.5_2_12:118796881-118796944:-|nuORF	ENST00000542902.5_2_12:118796881-118796944:-|nuORF	ENST00000542902.5_2_12:118796881-118796944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3434936404228	2	589.343738	1176.67292	2.5576	0.0015073	-0.6861	-0.00040435	1.8716	0.001103	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.82019	1	31986	31986		10.074	1.4806	1	9601000			5658	7223	2786	2804	6977	6977					0.09165300432778167
FLGPWPAAS	9	Unmodified	_FLGPWPAAS_					0	0	0		ENST00000509198.1_1_4:3521942-3534139:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	945.4833862185478	1	945.482879	944.475603	2.7607	0.0026102	0.2977	0.00028147	3.0584	0.0028917	945.4825853219631	61.249	0.39722	62.667	62.407	62.804	1.4177					22	12	2	0	0	0	0.031324	2	25685	25634;25685		85.357	44.908	1	3066800			5659	3738	2787	2805	6978;6979	6979					0.0011441721431992846
FLGPWPAAS	9	Unmodified	_FLGPWPAAS_					0	0	0		ENST00000509198.1_1_4:3521942-3534139:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	473.2956115603447	2	473.245078	944.475603	3.222	0.0015248	-0.63117	-0.0002987	2.5908	0.0012261	473.2448223859679	61.251	0.39545	62.668	62.439	62.834	1.4177					20	12	2	0	0	0	0.047334	1	25712	25712		38.151	9.978	1	1105800			5660	3738	2787	2805	6980	6980					0.0011441721431992846
FLGPWPAAS	9	Unmodified	_FLGPWPAAS_					0	0	0		ENST00000509198.1_1_4:3521942-3534139:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2454101443291	2	473.245078	944.475603	3.4607	0.0016378	-1.3976	-0.00066143	2.063	0.00097633	473.2443014085327	60.699	0.4611	62.664	62.451	62.912	1.9653					26	14	2	0	0	0	0.24063	1	25475	25475		28.487	3.813	1	1115800			5661	3738	2787	2805	6981	6981					0.0011441721431992846
FLGPWPAAS	9	Unmodified	_FLGPWPAAS_					0	0	0		ENST00000509198.1_1_4:3521942-3534139:-|nuORF;ENSG00000163956|ENST00000650182|LRPAP1	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	ENST00000509198.1_1_4:3521942-3534139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.4850341677666	1	945.482879	944.475603	3.3687	0.003185	-1.9006	-0.001797	1.468	0.001388	945.4814335986828	60.739	0.42953	62.704	62.451	62.881	1.9653					27	13	3	0	0	0	0.051699	1	25498	25498		67.344	35.227	1	2444500			5662	3738	2787	2805	6982	6982					0.0011441721431992846
FLGQTIIEV	9	Unmodified	_FLGQTIIEV_					0	0	0		nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;ENSG00000198722|ENST00000635942|UNC13B;ENSG00000130477|ENST00000519716|UNC13A	nc|ENSG00000198722|O14795|UNC13B	nc|ENSG00000198722|O14795|UNC13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1019.580554187298	1	1019.57717	1018.5699	1.2168	0.0012406	0.91894	0.00093693	2.1357	0.0021776	1019.5779256574027	71.922	0.2816	73.264	73.091	73.372	1.3415					13	8	2	0	0	0	0.13873	1	30209	30209		39.957	5.5556	1	1443100			5663	5072	2788	2806	6983	6983					0.061355112458159056
FLGQTIIEV	9	Unmodified	_FLGQTIIEV_					0	0	0		nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;ENSG00000198722|ENST00000635942|UNC13B;ENSG00000130477|ENST00000519716|UNC13A	nc|ENSG00000198722|O14795|UNC13B	nc|ENSG00000198722|O14795|UNC13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1019.579455554485	1	1019.57717	1018.5699	1.7508	0.0017851	3.0342	0.0030936	4.785	0.0048787	1019.5829388535474	71.488	0.2216	73.312	73.159	73.381	1.824					9	6	2	0	0	0	0.083604	1	29986	29986		54.774	0.94076	1	1073500			5664	5072	2788	2806	6984	6984					0.061355112458159056
FLHDNMVEI	9	Unmodified	_FLHDNMVEI_					0	0	0		nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3;nc|ENSG00000005156|P49916-4|LIG3;nc|ENSG00000005156|P49916-3|LIG3;ENST00000593099.5_1_17:33324760-33324883:+|nuORF	nc|ENSG00000005156|P49916-2|LIG3	nc|ENSG00000005156|P49916-2|LIG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.2712280154228	2	559.270967	1116.52738	1.6748	0.00093665	-1.9226	-0.0010753	-0.24786	-0.00013862	559.2698316872655	47.786	0.23928	48.117	47.989	48.228	0.33034					12	7	2	0	0	0	0.79362	1	20078	20078		3.5965	0.31518	1	865240			5665	481	2789	2807	6985	6985					-0.02622207154058742
FLHETKTI	8	Unmodified	_FLHETKTI_					0	0	0		ENSG00000141194|ENST00000268912|OR4D1	ENSG00000141194|ENST00000268912|OR4D1	ENSG00000141194|ENST00000268912|OR4D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2758361697197	2	494.776742	987.538931	2.7589	0.001365	3.9727	0.0019656	6.7315	0.0033306	494.77904099383574	81.734	0.64712	82.015	81.812	82.459	0.2802					50	20	4	0	0	0	0.86202	1	34282	34282		15.768	2.2603	1	15408000			5666	2948	2790	2808	6986	6986					0.0446635793156247
FLIDDNFKVWL	11	Unmodified	_FLIDDNFKVWL_					0	0	0		nc|ENSG00000162571|Q6ZVT0-2|TTLL10;ENSG00000162571|ENST00000379289|TTLL10	nc|ENSG00000162571|Q6ZVT0-2|TTLL10	nc|ENSG00000162571|Q6ZVT0-2|TTLL10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	470.2866699099541	3	470.586972	1408.73909	2.0094	0.00094557	-3.6357	-0.0017109	-1.6263	-0.00076533	470.92004930175085	96.728	0.13836	96.728	96.634	96.772	0					12	4	4	0	0	0	0.14606	1	40454	40454		4.7159	0	1	1796700			5667	3626	2791	2809	6987	6987					0.05106787808495028
FLIDRVFGI	9	Unmodified	_FLIDRVFGI_					0	0	0		nc|ENSG00000118855|Q9H3U5-4|MFSD1;ENSG00000118855|ENST00000415822|MFSD1;nc|ENSG00000118855|Q9H3U5-6|MFSD1	nc|ENSG00000118855|Q9H3U5-4|MFSD1	nc|ENSG00000118855|Q9H3U5-4|MFSD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3160888552666	2	540.316035	1078.61752	2.713	0.0014659	0.48137	0.00026009	3.1943	0.001726	540.3171732918886	80.229	0.25107	81.48	81.324	81.575	1.2512					12	7	2	0	0	0	0.11077	1	33667	33667		45.74	9.2737	1	1048100			5668	2049	2792	2810	6988	6988					0.08135210236650892
FLIDRVFGI	9	Unmodified	_FLIDRVFGI_					0	0	0		nc|ENSG00000118855|Q9H3U5-4|MFSD1;ENSG00000118855|ENST00000415822|MFSD1;nc|ENSG00000118855|Q9H3U5-6|MFSD1	nc|ENSG00000118855|Q9H3U5-4|MFSD1	nc|ENSG00000118855|Q9H3U5-4|MFSD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	540.316035	1078.61752	1.5439	0.00083417	0.20736	0.00011204	1.7512	0.00094621	540.3166641312746	79.681	0.27647	81.398	81.261	81.537	1.7167	-0.040802	-4.5789E-05	NaN	45.74	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	938980			5669	2049	2792	2810							0.08135210236650892
FLIEAATEKKI	11	Unmodified	_FLIEAATEKKI_					0	0	0			REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	REV__nc|ENSG00000138496|Q8IXQ6-3|PARP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.5841857790947	3	421.583339	1261.72819	2.178	0.00091819	-0.0073823	-3.1122E-06	2.1706	0.00091508	421.5832927852882	53.981	0.25124	54.302	54.16	54.411	0.32088					12	7	2	0	0	0	0.7432	1	22605	22605		17.049	1.31	1	932570	+		5670	10067	2793	2811	6989	6989					0.10779385434216238
FLIEEQKIV	9	Unmodified	_FLIEEQKIV_					0	0	0		ENST00000407959.1_1_6:5788581-5788740:-|nuORF;ENSG00000109475|ENST00000394667|RPL34	ENST00000407959.1_1_6:5788581-5788740:-|nuORF	ENST00000407959.1_1_6:5788581-5788740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8267089724541	2	559.826432	1117.63831	2.0931	0.0011718	-0.137	-7.6698E-05	1.9561	0.0010951	559.8260429170715	60.699	0.28382	61.027	60.887	61.171	0.32809					20	8	3	0	0	0	0.20671	1	25453	25453		32.305	5.4218	1	1747600			5671	1666	2794	2812	6990	6990					0.08419755825661923
FLIEEQKIVV	10	Unmodified	_FLIEEQKIVV_					0	0	0		ENST00000407959.1_1_6:5788581-5788740:-|nuORF;ENSG00000109475|ENST00000394667|RPL34	ENST00000407959.1_1_6:5788581-5788740:-|nuORF	ENST00000407959.1_1_6:5788581-5788740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3603393435478	2	609.360639	1216.70673	0.86131	0.00052485	-3.4746	-0.0021173	-2.6133	-0.0015924	609.3581982987521	56.625	0.20572	58.594	58.487	58.693	1.9684					11	6	2	0	0	0	0.091617	1	23741	23741		65.474	33.168	1	2548000			5672	1666	2795	2813	6991	6991					0.10704000405507941
FLIEWPAL	8	Unmodified	_FLIEWPAL_					0	0	0			REV__ENST00000273064.10_1_2:219460738-219461044:+|nuORF	REV__ENST00000273064.10_1_2:219460738-219461044:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7809631228447	2	494.778754	987.542954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.896	1	82.129	81.629	82.629	1.2332								0	0	0	1.0178	1	33961	33961		17.087	3.5787	1		+		5673	12240	2796	2814	6992	6992					0.04868447425269551
FLIFLCLFF	9	Unmodified	_FLIFLCLFF_					0	0	0		tr|A0A7D6VN26|A0A7D6VN26_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15935PE=4SV=1	tr|A0A7D6VN26|A0A7D6VN26_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15935PE=4SV=1	tr|A0A7D6VN26|A0A7D6VN26_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15935PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8239623904228	2	581.822107	1161.62966	1.6056	0.00093419	2.6438	0.0015382	4.2495	0.0024724	581.8226720834168	68.619	0.63879	70.472	70.281	70.92	1.853					26	13	3	0	0	0	0.24585	1	28815	28815		28.173	0	1	2999200			5674	16723	2797	2815	6993	6993					0.05531110655488192
FLIPIYHQV	9	Unmodified	_FLIPIYHQV_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	565.3256713747978	2	565.32386	1128.63317	1.8099	0.0010232	1.4729	0.00083265	3.2827	0.0018558	565.3249100277255	64.248	0.12875	64.577	64.497	64.626	0.32899					5	3	2	0	0	0	0.40005	1	26927	26927		21.747	9.2151	1	271450			5675	5477	2798	2816	6994	6994					0.07399496753669155
FLIPIYHQV	9	Unmodified	_FLIPIYHQV_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3284789919853	2	565.32386	1128.63317	3.0069	0.0016999	4.0646	0.0022978	7.0715	0.0039977	565.3264007333172	62.953	0.40063	64.366	64.226	64.626	1.4134					20	12	2	0	0	0	0.11669	1	26413	26413		57.471	30.588	1	1040800			5676	5477	2798	2816	6995	6995					0.07399496753669155
FLIQHLPLV	9	Unmodified	_FLIQHLPLV_					0	0	0		chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1;ENST00000430069.5_1_3:176771676-176782752:-|nuORF;ENST00000424913.5_1_3:176771673-176816307:-|nuORF	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3336669802666	2	540.334227	1078.6539	1.6164	0.0008734	-0.87358	-0.00047203	0.74283	0.00040138	540.3336865861836	73.575	0.7666	73.575	73.121	73.888	0					58	24	3	0	0	0	0.0082953	4	30588	30537;30588;30640;30691		109.63	59.96	1	5349900			5677	257	2799	2817	6996;6997;6998;6999	6997					0.1177208713336313
FLIQHLPLV	9	Unmodified	_FLIQHLPLV_					0	0	0		chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1;ENST00000430069.5_1_3:176771676-176782752:-|nuORF;ENST00000424913.5_1_3:176771673-176816307:-|nuORF	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3353149294853	2	540.334227	1078.6539	2.1373	0.0011549	0.27308	0.00014756	2.4104	0.0013024	540.334249493729	72.966	0.66328	73.291	72.889	73.553	0.32494					51	20	3	0	0	0	0.0045981	5	30513	30412;30466;30513;30551;30598		123.1	52.381	1	4931500			5678	257	2799	2817	7000;7001;7002;7003;7004	7002					0.1177208713336313
FLIQHLPLV	9	Unmodified	_FLIQHLPLV_					0	0	0		chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1;ENST00000430069.5_1_3:176771676-176782752:-|nuORF;ENST00000424913.5_1_3:176771673-176816307:-|nuORF	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3345825076103	2	540.334227	1078.6539	1.7844	0.00096416	-0.49203	-0.00026586	1.2924	0.0006983	540.3338917161084	71.731	1.0211	73.072	72.571	73.592	1.3415					83	32	4	0	0	0	0.0017386	6	30031	29984;30031;30070;30109;30149;30194		131.3	60.582	1	20460000			5679	257	2799	2817	7005;7006;7007;7008;7009;7010	7006					0.1177208713336313
FLIQHLPLV	9	Unmodified	_FLIQHLPLV_					0	0	0		chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1;ENST00000430069.5_1_3:176771676-176782752:-|nuORF;ENST00000424913.5_1_3:176771673-176816307:-|nuORF	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	chr3:177053918-177197121|145|16.23|0.1|7.36|-|0|TBL1XR1,TBL1XR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3342162966728	2	540.334227	1078.6539	1.4196	0.00076705	-0.27346	-0.00014776	1.1461	0.00061929	540.3340066563295	71.246	0.89204	73.07	72.489	73.381	1.8239					84	28	4	0	0	0	0.0017386	6	29925	29749;29797;29847;29885;29925;29973		131.3	70.908	1	15431000			5680	257	2799	2817	7011;7012;7013;7014;7015;7016	7015					0.1177208713336313
FLIRFLQRLYM	11	Unmodified	_FLIRFLQRLYM_					0	0	0			REV__nc|ENSG00000113712|P48729-3|CSNK1A1	REV__nc|ENSG00000113712|P48729-3|CSNK1A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2918884158134	3	500.623364	1498.84826	3.856	0.0019304	0.39821	0.00019935	4.2542	0.0021298	500.62356926077973	81.995	0.46458	83.208	82.853	83.317	1.2125					22	14	2	0	0	0	0.14606	1	34379	34379		0.50596	0	1	1003500	+		5681	9391	2800	2818	7017	7017					0.11879095227004655
FLIRFLQRLYM	11	Unmodified	_FLIRFLQRLYM_					0	0	0			REV__nc|ENSG00000113712|P48729-3|CSNK1A1	REV__nc|ENSG00000113712|P48729-3|CSNK1A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	500.623364	1498.84826	3.3604	0.0016823	0.67031	0.00033557	4.0307	0.0020179	500.9578424044281	81.484	0.4603	83.18	82.86	83.32	1.6959	-0.013821	0.00021432	NaN	0.50596	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	668940	+		5682	9391	2800	2818							0.11879095227004655
FLIRKIMRRSK	11	Unmodified	_FLIRKIMRRSK_					0	0	0		tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	724.4597656130791	2	724.455748	1446.89694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.171	1	95.171	94.671	95.671	0								0	0	0	0.63775	1	39773	39773		1.4819	0	1				5683	17271	2801	2819	7018	7018					0.19137008586744741
FLIRKIMRRSK	11	Unmodified	_FLIRKIMRRSK_					0	0	0		tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	tr|A0A7D7A385|A0A7D7A385_9CLOTNa+/H+antiporterOS=ClostridiumintestinaleOX=36845GN=HZF06_11690PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	724.4531127810478	2	724.455748	1446.89694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.293	1	95.293	94.793	95.793	0								0	0	0	0.63775	1	39824	39824		1.4819	0	1				5684	17271	2801	2819	7019	7019					0.19137008586744741
FLKDAPGEFL	10	Unmodified	_FLKDAPGEFL_					0	0	0		ENST00000483602.1_1_2:241534571-241535939:+|nuORF;ENST00000416591.5_1_2:241535566-241537362:+|nuORF;nc|ENSG00000142330|Q9HC96-4|CAPN10;nc|ENSG00000142330|Q9HC96-2|CAPN10;ENSG00000142330|ENST00000391984|CAPN10	ENST00000483602.1_1_2:241534571-241535939:+|nuORF	ENST00000483602.1_1_2:241534571-241535939:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8065063357353	2	568.802957	1135.59136	0.88972	0.00050607	3.8019	0.0021626	4.6917	0.0026686	568.8054916250611	51.65	0.22422	53.047	52.87	53.095	1.3966					12	7	2	0	0	0	0.40874	1	21643	21643		32.786	0.4802	1	6451100			5685	2992	2802	2820	7020	7020					0.028988962745188473
FLKDLVASV	9	Unmodified	_FLKDLVASV_					0	0	0		ENST00000530791.5_1_11:65687742-65688356:+|nuORF;ENSG00000175550|ENST00000312515|DRAP1;nc|ENSG00000175550|Q14919-2|DRAP1	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2955810427666	2	496.294768	990.574983	2.4503	0.0012161	0.33556	0.00016654	2.7859	0.0013826	496.29499478921434	53.363	0.25373	53.686	53.567	53.821	0.32284					10	7	2	0	0	0	0.20671	1	22349	22349		32.305	15.363	1	510340			5686	4378	2803	2821	7021	7021					0.07931815108429419
FLKDLVASV	9	Unmodified	_FLKDLVASV_					0	0	0		ENST00000530791.5_1_11:65687742-65688356:+|nuORF;ENSG00000175550|ENST00000312515|DRAP1;nc|ENSG00000175550|Q14919-2|DRAP1	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2945739626884	2	496.294768	990.574983	1.0949	0.00054342	-1.8851	-0.00093558	-0.79018	-0.00039216	496.29346342570756	52.186	0.19013	53.583	53.492	53.682	1.3966					8	5	2	0	0	0	0.060242	2	21875	21825;21875		63.961	13.656	1	1152000			5687	4378	2803	2821	7022;7023	7023					0.07931815108429419
FLKDLVASV	9	Unmodified	_FLKDLVASV_					0	0	0		ENST00000530791.5_1_11:65687742-65688356:+|nuORF;ENSG00000175550|ENST00000312515|DRAP1;nc|ENSG00000175550|Q14919-2|DRAP1	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	ENST00000530791.5_1_11:65687742-65688356:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2949401736259	2	496.294768	990.574983	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.614	1	53.586	53.086	54.086	1.9722								0	0	0	0.043066	1	21628	21628		63.961	11.692	1				5688	4378	2803	2821	7024	7024					0.07931815108429419
FLKENIKEIL	10	Unmodified	_FLKENIKEIL_					0	0	0		tr|A0A7D7A199|A0A7D7A199_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03145PE=4SV=1	tr|A0A7D7A199|A0A7D7A199_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03145PE=4SV=1	tr|A0A7D7A199|A0A7D7A199_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2525512576103	3	416.251701	1245.73327	1.7042	0.00070937	0.15495	6.45E-05	1.8592	0.00077387	416.25178549349766	56.785	0.33801	58.199	58.093	58.431	1.4145					16	10	2	0	0	0	0.83529	1	23809	23809		8.4443	1.3426	1	1641900			5689	17234	2804	2822	7025	7025					0.12023689296847806
FLKFLLFFF	9	Unmodified	_FLKFLLFFF_					0	0	0		chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3571655154228	2	611.357171	1220.69979	2.1411	0.001309	-1.5165	-0.00092713	0.62455	0.00038182	611.3559752604883	77.193	1.4644	77.193	76.284	77.749	0					117	46	3	0	0	0	0.84963	1	31808	31808		0.6015	0	1	2596800			5690	302	2805	2823	7026	7026					0.09826732315605113
FLKFLLFFF	9	Unmodified	_FLKFLLFFF_					0	0	0		chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3571655154228	2	611.357171	1220.69979	2.8376	0.0017348	-2.1601	-0.0013206	0.67755	0.00041422	611.3553945976769	74.989	0.89393	76.295	75.936	76.83	1.3063					45	28	2	0	0	0	0.75267	1	31418	31418		5.2307	0	1	1015700			5691	302	2805	2823	7027	7027					0.09826732315605113
FLKFLLFFF	9	Unmodified	_FLKFLLFFF_					0	0	0		chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	611.357171	1220.69979	2.1731	0.0013285	-2.982	-0.0018231	-0.80896	-0.00049456	611.3554599567536	75.868	0.59371	75.868	75.66	76.254	0	-0.31644	-0.00052308	NaN	5.2307	34	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930680			5692	302	2805	2823							0.09826732315605113
FLKFLLFFF	9	Unmodified	_FLKFLLFFF_					0	0	0		chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	611.357171	1220.69979	2.255	0.0013786	-2.6567	-0.0016242	-0.40179	-0.00024564	611.3553418143983	75.827	0.7072	76.148	75.804	76.511	0.32163	-0.03617	-0.00012535	NaN	5.2307	47	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	996460			5693	302	2805	2823							0.09826732315605113
FLKFLLFFF	9	Unmodified	_FLKFLLFFF_					0	0	0		chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	chrX:118419411-118432781|190|10.3|0.42|4.6|+|0|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|38	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	611.357171	1220.69979	2.8113	0.0017187	-2.0914	-0.0012786	0.71995	0.00044015	611.3555899879447	74.644	0.56763	76.426	76.163	76.73	1.7817	0.24163	0.00056593	NaN	5.2307	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	665940			5694	302	2805	2823							0.09826732315605113
FLKHPEYL	8	Unmodified	_FLKHPEYL_					0	0	0		nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2;ENSG00000172432|ENST00000307126|GTPBP2;ENST00000432918.5_1_6:43589353-43589629:-|nuORF;nc|ENSG00000172432|Q9BX10-3|GTPBP2	nc|ENSG00000172432|Q9BX10-2|GTPBP2	nc|ENSG00000172432|Q9BX10-2|GTPBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7888061404228	2	523.78711	1045.55967	4.3383	0.0022724	3.9017	0.0020436	8.24	0.004316	523.7887486199362	90.464	0.41468	91.446	91.334	91.749	0.98157					16	12	2	0	0	0	0.76103	1	38172	38172		24.674	1.5255	1	1503000			5695	4236	2806	2824	7028	7028					0.038709483112370435
FLKIAKMM	8	Unmodified	_FLKIAKMM_					0	0	0			REV__ENSG00000129317|ENST00000344862|PUS7L	REV__ENSG00000129317|ENST00000344862|PUS7L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2881957888603	2	491.284834	980.555116	3.7525	0.0018436	2.3062	0.001133	6.0587	0.0029766	491.2862307956071	97.395	0.14396	97.679	97.601	97.745	0.28442					11	5	3	0	0	0	0.89008	1	40980	40980		2.5775	0.73324	1	5633900	+		5696	9753	2807	2825	7029	7029					0.06406024572459046
FLKIAKMM	8	Unmodified	_FLKIAKMM_					0	0	0			REV__ENSG00000129317|ENST00000344862|PUS7L	REV__ENSG00000129317|ENST00000344862|PUS7L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	491.284834	980.555116	3.4258	0.001683	3.181	0.0015628	6.6067	0.0032458	491.28639296414207	97.862	0.15485	97.953	97.874	98.029	0.090881	0.21661	0.000389	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12985000	+		5697	9753	2807	2825							0.06406024572459046
FLKIAKMM	8	Unmodified	_FLKIAKMM_					0	0	0			REV__ENSG00000129317|ENST00000344862|PUS7L	REV__ENSG00000129317|ENST00000344862|PUS7L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.284834	980.555116	3.7525	0.0018436	2.3062	0.001133	6.0587	0.0029766	491.2862307956071	97.395	0.14396	97.679	97.601	97.745	0.28442	-0.056963	-0.00047051	NaN	2.5775	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5633900	+		5698	9753	2807	2825							0.06406024572459046
FLKIAKMM	8	Unmodified	_FLKIAKMM_					0	0	0			REV__ENSG00000129317|ENST00000344862|PUS7L	REV__ENSG00000129317|ENST00000344862|PUS7L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	491.284834	980.555116	3.3841	0.0016626	2.9579	0.0014532	6.342	0.0031157	491.2865276158042	97.27	0.11673	97.576	97.508	97.625	0.3062	-0.15965	0.00016981	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1961900	+		5699	9753	2807	2825							0.06406024572459046
FLKIDGNDY	9	Unmodified	_FLKIDGNDY_					0	0	0			REV__nc|ENSG00000243667|Q96MX6-2|DNAAF10	REV__nc|ENSG00000243667|Q96MX6-2|DNAAF10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.7711669802666	2	542.769114	1083.52368	2.415	0.0013108	1.7012	0.00092334	4.1161	0.0022341	542.7695867539755	83.761	0.52089	84.031	83.801	84.322	0.27029					29	16	2	0	0	0	0.77526	1	34991	34991		4.3292	0	1	6134000	+		5700	11935	2808	2826	7030	7030					-0.014745536562713824
FLKIFHRHLL	10	Unmodified	_FLKIFHRHLL_					0	0	0			REV__ENST00000253247.8_1_17:65739971-65740130:+|nuORF	REV__ENST00000253247.8_1_17:65739971-65740130:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7068969607353	4	331.706663	1322.79755	-1.7442	-0.00057856	2.0143	0.00066814	0.27007	8.9582E-05	331.70730387911135	44.202	0.78959	44.202	43.682	44.472	0					72	24	4	0	0	0	0.89803	1	18545	18545		1.5923	0.13716	1	3789400	+		5701	12149	2809	2827	7031	7031					0.149059339643145
FLKITIVFL	9	Unmodified	_FLKITIVFL_					0	0	0		Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3572875857353	2	547.354628	1092.6947	4.9736	0.0027223	-0.254	-0.00013903	4.7196	0.0025833	547.3545498056475	89.329	2.0347	90.349	90.074	92.109	1.0199					159	63	4	0	0	0	0.27148	1	38073	38073		26.884	9.9414	1	15924000			5702	7604	2810	2828	7032	7032					0.15206428452984255
FLKKICFNK	9	Unmodified	_FLKKICFNK_					0	0	0		ENST00000300107.7_1_15:65442808-65442961:-|nuORF	ENST00000300107.7_1_15:65442808-65442961:-|nuORF	ENST00000300107.7_1_15:65442808-65442961:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5140563845634	3	380.89145	1139.65252	-0.049458	-1.8838E-05	-2.0562	-0.0007832	-2.1057	-0.00080204	380.891046313951	48.705	0.63327	48.705	48.524	49.157	0					41	19	3	0	0	0	0.11539	1	20332	20332		8.1555	0	1	1659500			5703	5752	2811	2829	7033	7033					0.08828129772950888
FLKRKLKF	8	Unmodified	_FLKRKLKF_					0	0	0			REV__ENSG00000109911|ENST00000640961|ELP4	REV__ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5746032595634	3	360.57445	1078.70152	-0.27624	-9.9606E-05	2.0434	0.00073678	1.7671	0.00063718	360.57504615525505	20.735	0.80494	21.86	21.414	22.219	1.1254					87	26	5	0	0	0	0.89185	1	8763	8763		0.45834	0.057624	1	10923000	+		5704	9284	2812	2830	7034	7034					0.16531786124232895
FLKRKLKF	8	Unmodified	_FLKRKLKF_					0	0	0			REV__ENSG00000109911|ENST00000640961|ELP4	REV__ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5749694705009	3	360.57445	1078.70152	0.032295	1.1645E-05	1.0628	0.00038321	1.0951	0.00039485	360.57472167988277	20.079	0.9906	21.602	21.108	22.098	1.5237					102	32	4	0	0	0	0.89185	1	8538	8538		0.45834	0.057624	1	12921000	+		5705	9284	2812	2830	7035	7035					0.16531786124232895
FLKRMRTK	8	Unmodified	_FLKRMRTK_					0	0	0		ENSG00000180432|ENST00000316161|CYP8B1	ENSG00000180432|ENST00000316161|CYP8B1	ENSG00000180432|ENST00000316161|CYP8B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3317138552666	2	540.328953	1078.64335	1.4285	0.00077184	2.7294	0.0014748	4.1579	0.0022466	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.88958	2	29159	29051;29159		2.8892	0.31174	1	3238400			5706	4547	2813	2831	7036;7037	7037					0.107177812072905
FLKVLNRAR	9	Unmodified	_FLKVLNRAR_					0	0	0		ENST00000487321.1_1_2:219114510-219118635:+|nuORF;ENSG00000163466|ENST00000315717|ARPC2	ENST00000487321.1_1_2:219114510-219118635:+|nuORF	ENST00000487321.1_1_2:219114510-219118635:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	558.7737304568291	2	558.85365	1115.69275	1.8749	0.0010478	1.9655	0.0010984	3.8404	0.0021462	558.8548619847597	44.952	0.76407	46.912	46.351	47.115	1.9596					28	23	2	0	0	0	0.11275	1	18817	18817		14.838	5.4551	1	577040			5707	3685	2814	2832	7038	7038					0.1395281248774154
FLKWIFKRERP	11	Unmodified	_FLKWIFKRERP_					0	0	0		tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	760.8153564333916	2	760.448446	1518.88234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.06	1	100.13	99.633	100.63	0.072716								0	0	0	0.63775	1	41895	41895		1.4819	1.1313	1				5708	16339	2815	2833	7039	7039					0.14365259710234568
FLLALEPEL	9	Unmodified	_FLLALEPEL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.8036376833916	2	522.802426	1043.5903	2.4322	0.0012716	0.096216	5.0302E-05	2.5285	0.0013219	522.8023556075883	90.828	0.3171	90.828	90.682	90.999	0					17	9	2	0	0	0	0.13437	1	37955	37955		40.449	8.3316	1	1379000			5709	3731	2816	2834	7040	7040					0.07024681905613761
FLLALEPEL	9	Unmodified	_FLLALEPEL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.8038207888603	2	522.802426	1043.5903	2.8046	0.0014663	0.22826	0.00011933	3.0329	0.0015856	522.8021337680925	90.36	0.3677	90.569	90.372	90.74	0.20903					24	11	4	0	0	0	0.13437	1	37843	37843		40.449	8.3316	1	1399300			5710	3731	2816	2834	7041	7041					0.07024681905613761
FLLALEPEL	9	Unmodified	_FLLALEPEL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8051025271416	2	522.802426	1043.5903	5.3033	0.0027726	-0.64821	-0.00033888	4.6551	0.0024337	522.8020920989891	89.519	0.4996	90.539	90.3	90.8	1.0199					35	15	3	0	0	0	0.03795	1	37745	37745		77.984	7.2688	1	6729300			5711	3731	2816	2834	7042	7042					0.07024681905613761
FLLALEPEL	9	Unmodified	_FLLALEPEL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant;ENST00000481168.1_1_3:128363760-128369658:-|nuORF;ENST00000497415.1_1_3:128359957-128369658:-|nuORF	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.8044311404228	2	522.802426	1043.5903	4.6454	0.0024286	-0.095573	-4.9966E-05	4.5498	0.0023786	522.8024053089467	89.099	0.50225	90.504	90.233	90.735	1.4045					33	15	3	0	0	0	0.02596	2	37532	37486;37532		93.883	12.019	1	4783500			5712	3731	2816	2834	7043;7044	7044					0.07024681905613761
FLLASLCAFL	10	Unmodified	_FLLASLCAFL_					0	0	0			REV__ENST00000480574.1_1_1:45212216-45212429:+|nuORF	REV__ENST00000480574.1_1_1:45212216-45212429:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8138305544853	2	549.306821	1096.59909	1.907	0.0010475	-2.9423	-0.0016162	-1.0353	-0.00056867	549.3035087289288	68.138	0.61351	69.516	69.303	69.916	1.3778					48	19	3	0	0	0	0.65574	1	28674	28674		20.454	3.3407	1	9025700	+		5713	13352	2817	2835	7045	7045					0.054653322704325547
FLLDGFPRTV	10	Unmodified	_FLLDGFPRTV_					0	0	0		ENST00000469238.1_1_1:33480014-33487286:-|nuORF;nc|ENSG00000004455|P54819-4|AK2;ENST00000427762.1_1_1:59096724-59097153:-|nuORF;nc|ENSG00000004455|P54819-6|AK2;nc|ENSG00000004455|P54819-3|AK2;tr|A0A553SH84|A0A553SH84_NIACIAdenylatekinaseOS=NialliacirculansOX=1397GN=adkPE=3SV=1;nc|ENSG00000004455|P54819-5|AK2;nc|ENSG00000004455|P54819-2|AK2;ENSG00000004455|ENST00000672715|AK2	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8250610232353	2	582.824224	1163.63389	1.6131	0.00094015	-0.1303	-7.5943E-05	1.4828	0.00086421	582.8240617913843	69.452	0.69469	69.452	69.202	69.897	0					48	21	3	0	0	0	0.50772	5	28960	28876;28919;28960;29004;29059		27.223	7.5736	1	1813100			5714	468	2818	2836	7046;7047;7048;7049;7050	7048					0.058622914027409934
FLLDGFPRTV	10	Unmodified	_FLLDGFPRTV_					0	0	0		ENST00000469238.1_1_1:33480014-33487286:-|nuORF;nc|ENSG00000004455|P54819-4|AK2;ENST00000427762.1_1_1:59096724-59097153:-|nuORF;nc|ENSG00000004455|P54819-6|AK2;nc|ENSG00000004455|P54819-3|AK2;tr|A0A553SH84|A0A553SH84_NIACIAdenylatekinaseOS=NialliacirculansOX=1397GN=adkPE=3SV=1;nc|ENSG00000004455|P54819-5|AK2;nc|ENSG00000004455|P54819-2|AK2;ENSG00000004455|ENST00000672715|AK2	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8255493044853	2	582.824224	1163.63389	1.3412	0.00078166	0.55662	0.00032441	1.8978	0.0011061	582.824349101687	68.99	0.62636	69.312	68.967	69.594	0.32223					47	19	3	0	0	0	0.091617	4	28866	28817;28866;28918;28987		65.474	35.249	1	2025100			5715	468	2818	2836	7051;7052;7053;7054	7052					0.058622914027409934
FLLDGFPRTV	10	Unmodified	_FLLDGFPRTV_					0	0	0		ENST00000469238.1_1_1:33480014-33487286:-|nuORF;nc|ENSG00000004455|P54819-4|AK2;ENST00000427762.1_1_1:59096724-59097153:-|nuORF;nc|ENSG00000004455|P54819-6|AK2;nc|ENSG00000004455|P54819-3|AK2;tr|A0A553SH84|A0A553SH84_NIACIAdenylatekinaseOS=NialliacirculansOX=1397GN=adkPE=3SV=1;nc|ENSG00000004455|P54819-5|AK2;nc|ENSG00000004455|P54819-2|AK2;ENSG00000004455|ENST00000672715|AK2	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8253051638603	2	582.824224	1163.63389	1.9223	0.0011204	0.48114	0.00028042	2.4034	0.0014008	582.8244914705307	67.784	0.94606	69.162	68.882	69.828	1.3778					73	30	4	0	0	0	0.06111	4	28438	28387;28438;28488;28537		74.2	19.129	1	5877300			5716	468	2818	2836	7055;7056;7057;7058	7056					0.058622914027409934
FLLDGFPRTV	10	Unmodified	_FLLDGFPRTV_					0	0	0		ENST00000469238.1_1_1:33480014-33487286:-|nuORF;nc|ENSG00000004455|P54819-4|AK2;ENST00000427762.1_1_1:59096724-59097153:-|nuORF;nc|ENSG00000004455|P54819-6|AK2;nc|ENSG00000004455|P54819-3|AK2;tr|A0A553SH84|A0A553SH84_NIACIAdenylatekinaseOS=NialliacirculansOX=1397GN=adkPE=3SV=1;nc|ENSG00000004455|P54819-5|AK2;nc|ENSG00000004455|P54819-2|AK2;ENSG00000004455|ENST00000672715|AK2	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	ENST00000469238.1_1_1:33480014-33487286:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8248779177666	2	582.824224	1163.63389	1.2053	0.00070248	0.97802	0.00057001	2.1833	0.0012725	582.824703394931	67.235	0.67804	69.124	68.86	69.538	1.8889					60	21	4	0	0	0	0.054878	3	28280	28178;28229;28280		76.825	19.103	1	4894300			5717	468	2818	2836	7059;7060;7061	7061					0.058622914027409934
FLLDGKVLSL	10	Unmodified	_FLLDGKVLSL_					0	0	0		ENST00000465230.5_1_2:220471080-220471347:+|nuORF;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;ENSG00000144589|ENST00000456909|STK11IP	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8372680544853	2	552.8368	1103.65905	1.4136	0.00078147	-1.5107	-0.00083516	-0.097106	-5.3684E-05	552.8364728785015	76.411	0.30654	76.411	76.254	76.561	0					21	9	3	0	0	0	0.25819	1	31823	31823		41.84	3.8656	1	2192000			5718	3083	2819	2837	7062	7062					0.1113634620535322
FLLDGKVLSL	10	Unmodified	_FLLDGKVLSL_					0	0	0		ENST00000465230.5_1_2:220471080-220471347:+|nuORF;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;ENSG00000144589|ENST00000456909|STK11IP	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8378173708916	2	552.8368	1103.65905	2.3006	0.0012718	-0.66929	-0.00037001	1.6313	0.00090183	552.8364105597652	75.96	0.31257	76.282	76.081	76.393	0.32164					17	9	2	0	0	0	0.2264	1	31750	31750		45.74	11.338	1	1531100			5719	3083	2819	2837	7063	7063					0.1113634620535322
FLLDGKVLSL	10	Unmodified	_FLLDGKVLSL_					0	0	0		ENST00000465230.5_1_2:220471080-220471347:+|nuORF;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;ENSG00000144589|ENST00000456909|STK11IP	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8381225466728	2	552.8368	1103.65905	2.9381	0.0016243	-0.45396	-0.00025096	2.4842	0.0013734	552.836835370429	74.85	0.40746	76.156	75.966	76.374	1.3063					29	12	3	0	0	0	0.059954	2	31410	31410;31455		93.938	28.703	1	4823800			5720	3083	2819	2837	7064;7065	7064					0.1113634620535322
FLLDGKVLSL	10	Unmodified	_FLLDGKVLSL_					0	0	0		ENST00000465230.5_1_2:220471080-220471347:+|nuORF;ENST00000475396.5_1_2:220462865-220474366:+|nuORF;ENSG00000144589|ENST00000456909|STK11IP	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	ENST00000465230.5_1_2:220471080-220471347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8379394412041	2	552.8368	1103.65905	2.8291	0.001564	-0.87853	-0.00048568	1.9506	0.0010783	552.8362822017815	74.427	0.50654	76.223	76.021	76.527	1.7962					36	15	4	0	0	0	0.078293	2	31213	31213;31255		67.838	17.905	1	3450600			5721	3083	2819	2837	7066;7067	7066					0.1113634620535322
FLLDHGASL	9	Unmodified	_FLLDHGASL_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7621337771416	2	486.761092	971.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.354	1	49.354	48.854	49.854	0								0	0	0	0.16797	1	20604	20604		28.487	10.352	1				5722	3278	2820	2838	7068	7068					0.02073784897470432
FLLDHGASL	9	Unmodified	_FLLDHGASL_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7615844607353	2	486.761092	971.507631	2.4767	0.0012056	-0.84869	-0.00041311	1.628	0.00079246	486.7607321556814	48.781	0.15512	49.111	49.039	49.194	0.33034					6	4	2	0	0	0	0.10294	1	20460	20460		48.346	19.859	1	323120			5723	3278	2820	2838	7069	7069					0.02073784897470432
FLLDHGASL	9	Unmodified	_FLLDHGASL_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7633544802666	2	486.761092	971.507631	2.4484	0.0011918	-0.45042	-0.00021925	1.998	0.00097253	486.76109812832556	47.412	0.22696	48.795	48.663	48.89	1.3825					9	6	2	0	0	0	0.051699	1	19841	19841		67.344	25.249	1	397130			5724	3278	2820	2838	7070	7070					0.02073784897470432
FLLDKALLI	9	Unmodified	_FLLDKALLI_					0	0	0		nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1	nc|ENSG00000141968|P15498-2|VAV1	nc|ENSG00000141968|P15498-2|VAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3368408083916	2	523.336436	1044.65832	1.2426	0.00065031	0.15395	8.0566E-05	1.3966	0.00073087	523.3367787338084	77.603	0.3282	79.354	79.167	79.495	1.7514					25	10	3	0	0	0	0.1109	1	32545	32545		45.7	3.6051	1	2256000			5725	2978	2821	2839	7071	7071					0.13777551556268008
FLLDKALLI	9	Unmodified	_FLLDKALLI_					0	0	0		nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1	nc|ENSG00000141968|P15498-2|VAV1	nc|ENSG00000141968|P15498-2|VAV1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	523.336436	1044.65832	1.8903	0.00098924	1.0432	0.00054594	2.9334	0.0015352	523.3380795343865	79.105	0.21674	79.406	79.279	79.496	0.30047	0.026642	0.0011757	NaN	45.7	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369380			5726	2978	2821	2839							0.13777551556268008
FLLDKALLI	9	Unmodified	_FLLDKALLI_					0	0	0		nc|ENSG00000141968|P15498-2|VAV1;ENSG00000141968|ENST00000602142|VAV1	nc|ENSG00000141968|P15498-2|VAV1	nc|ENSG00000141968|P15498-2|VAV1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	523.336436	1044.65832	2.636	0.0013795	-0.35839	-0.00018756	2.2776	0.0011919	523.3365915312959	78.097	0.32884	79.377	79.229	79.557	1.2809	-0.0016014	-0.00029124	NaN	45.7	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2285500			5727	2978	2821	2839							0.13777551556268008
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	517.2939941287041	2	516.826235	1031.63792	2.0437	0.0010563	0.94618	0.00048901	2.9899	0.0015453	516.8265503200281	43.308	0.37081	43.308	43.088	43.459	0					35	11	4	0	0	0	0.029622	1	18152	18152		53.404	28.413	1	5636500			5728	3888	2822	2840	7072	7072					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	344.8863098025322	3	344.886582	1031.63792	1.3563	0.00046778	-1.4491	-0.00049977	-0.092749	-3.1988E-05	344.88620143609387	42.766	0.34587	43.087	42.88	43.226	0.32058					31	11	4	0	0	0	0.37668	1	17974	17974		21.59	4.1475	1	4687400			5729	3888	2822	2840	7073	7073					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.2922851443291	2	516.826235	1031.63792	1.9436	0.0010045	1.1099	0.00057364	3.0536	0.0015782	516.8266583297276	42.788	0.40607	43.108	42.88	43.286	0.32058					35	13	4	0	0	0	0.029768	1	17985	17985		43.772	7.3062	1	7866200			5730	3888	2822	2840	7074	7074					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.8275024294853	2	516.826235	1031.63792	2.545	0.0013153	-0.0075901	-3.9228E-06	2.5374	0.0013114	516.8261447589447	41.026	0.53504	42.351	42.115	42.65	1.3254					56	16	5	0	0	0	0.013628	3	17219	17170;17219;17262		93.166	49.443	1	19627000			5731	3888	2822	2840	7075;7076;7077	7076					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	344.8868896365166	3	344.886582	1031.63792	1.0741	0.00037044	0.020339	7.0147E-06	1.0944	0.00037746	344.8865178759484	41.059	0.75436	42.385	41.96	42.715	1.3254					72	23	5	0	0	0	0.11077	2	17184	17184;17232		45.74	13.702	1	13369000			5732	3888	2822	2840	7078;7079	7078					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8270751833916	2	516.826235	1031.63792	2.3088	0.0011932	-0.14295	-7.388E-05	2.1658	0.0011193	516.8260305087655	40.67	0.50451	42.532	42.265	42.769	1.8624					47	15	4	0	0	0	0.033489	3	17050	17001;17050;17089		89.401	49.443	1	21324000			5733	3888	2822	2840	7080;7081;7082	7081					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	344.8867675662041	3	344.886582	1031.63792	1.6548	0.00057072	-0.97942	-0.00033779	0.67538	0.00023293	344.8861210091407	40.6	0.69469	42.463	42.171	42.866	1.8624					76	21	5	0	0	0	0.087723	2	17012	17012;17053		53.404	21.367	1	8597100			5734	3888	2822	2840	7083;7084	7083					0.12336380896454102
FLLDKKIGV	9	Unmodified	_FLLDKKIGV_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2;chr12:69588262-69592059|91|14.8|0.17|6.48|+|2|CCT2,CCT2|2;chr12:69589976-69592059|214|14.43|0.29|5.65|+|2|None,CCT2|1	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	344.886582	1031.63792	1.0741	0.00037044	0.020339	7.0147E-06	1.0944	0.00037746	344.8865178759484	41.059	0.75436	42.385	41.96	42.715	1.3254	-0.039057	0.00041845	NaN	53.404	72	23	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13369000			5735	3888	2822	2840							0.12336380896454102
FLLDLHFTL	9	Unmodified	_FLLDLHFTL_					0	0	0			REV__nc|ENSG00000160753|Q9BVN2-2|RUSC1	REV__nc|ENSG00000160753|Q9BVN2-2|RUSC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8160278201103	2	559.815867	1117.61718	3.4647	0.0019396	-0.26626	-0.00014905	3.1985	0.0017906	559.8155258433841	91.089	0.40572	92.455	92.28	92.686	1.366					33	12	4	0	0	0	0.051699	2	38339	38339;38389		67.344	3.1075	1	3175500	+		5736	10610	2823	2841	7085;7086	7085					0.06307790516802925
FLLDPYKYMTL	11	Unmodified	_FLLDPYKYMTL_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	702.3675414919853	2	702.367607	1402.72066	2.5909	0.0018198	-0.80298	-0.00056399	1.7879	0.0012558	702.367361779508	84.364	0.21745	84.364	84.244	84.461	0					10	6	2	0	0	0	0.54794	1	35176	35176		22.658	6.509	1	470840			5737	542	2824	2842	7087	7087					0.03540909842286055
FLLDPYKYMTL	11	Unmodified	_FLLDPYKYMTL_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	702.367607	1402.72066	2.3584	0.0016564	-0.054285	-3.8128E-05	2.3041	0.0016183	702.3682134060502	83.863	0.21014	84.129	83.981	84.191	0.26608	-0.06029	-0.0012341	NaN	22.658	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459230			5738	542	2824	2842							0.03540909842286055
FLLDPYKYMTL	11	Unmodified	_FLLDPYKYMTL_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	702.367607	1402.72066	2.3854	0.0016754	2.0765	0.0014585	4.4619	0.0031339	702.3686925884032	82.893	0.39915	84.105	83.951	84.35	1.2125	-0.083787	0.0017591	NaN	22.658	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1634400			5739	542	2824	2842							0.03540909842286055
FLLDPYKYMTL	11	Unmodified	_FLLDPYKYMTL_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	702.367607	1402.72066	2.3401	0.0016436	3.5962	0.0025259	5.9363	0.0041695	702.3691261813108	82.488	0.27892	84.158	83.986	84.265	1.67	-0.031019	0.003894	NaN	22.658	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1750200			5740	542	2824	2842							0.03540909842286055
FLLEFPISR	9	Unmodified	_FLLEFPISR_					0	0	0		ENST00000412676.5_1_12:108686098-108686329:-|nuORF	ENST00000412676.5_1_12:108686098-108686329:-|nuORF	ENST00000412676.5_1_12:108686098-108686329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3211547732353	2	561.321317	1120.62808	1.3003	0.0007299	-1.582	-0.00088802	-0.28169	-0.00015812	561.3200981336869	79.129	0.23892	79.129	78.968	79.206	0					13	7	2	0	0	0	0.59203	1	32917	32917		11.64	0.81637	1	702000			5741	6390	2825	2843	7088	7088					0.07259192891069688
FLLEGNVTLI	10	Unmodified	_FLLEGNVTLI_					0	0	0			REV__ENST00000487133.1_1_X:119739298-119742228:+|nuORF	REV__ENST00000487133.1_1_X:119739298-119742228:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8281127810478	2	559.826432	1117.63831	2.4028	0.0013451	0.56664	0.00031722	2.9694	0.0016624	559.8266293991278	58.923	0.34431	60.892	60.723	61.067	1.969					17	10	2	0	0	0	0.22673	1	24745	24745		45.7	1.9272	1	3031100	+		5742	11900	2826	2844	7089	7089					0.0841975582568466
FLLEKGYEV	9	Unmodified	_FLLEKGYEV_					0	0	0		nc|ENSG00000112699|O60547-2|GMDS;tr|A0A7D6VQ49|A0A7D6VQ49_9CLOTGDP-mannose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=gmdPE=3SV=1;ENSG00000112699|ENST00000380815|GMDS	nc|ENSG00000112699|O60547-2|GMDS	nc|ENSG00000112699|O60547-2|GMDS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	549.2987548708916	2	549.297507	1096.58046	1.6562	0.00090973	0.8409	0.0004619	2.4971	0.0013716	549.2981221638406	48.079	0.35099	48.079	47.839	48.19	0					22	10	3	0	0	0	0.043696	1	20088	20088		72.968	19.135	1	2429100			5743	1793	2827	2845	7090	7090					0.03603493900232024
FLLEKGYEV	9	Unmodified	_FLLEKGYEV_					0	0	0		nc|ENSG00000112699|O60547-2|GMDS;tr|A0A7D6VQ49|A0A7D6VQ49_9CLOTGDP-mannose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=gmdPE=3SV=1;ENSG00000112699|ENST00000380815|GMDS	nc|ENSG00000112699|O60547-2|GMDS	nc|ENSG00000112699|O60547-2|GMDS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2987548708916	2	549.297507	1096.58046	1.3839	0.00076016	0.92532	0.00050828	2.3092	0.0012684	549.298239134673	46.079	0.44018	47.454	47.209	47.649	1.3751					40	13	4	0	0	0	0.039278	1	19300	19300		76.825	22.992	1	8916700			5744	1793	2827	2845	7091	7091					0.03603493900232024
FLLEKGYEV	9	Unmodified	_FLLEKGYEV_					0	0	0		nc|ENSG00000112699|O60547-2|GMDS;tr|A0A7D6VQ49|A0A7D6VQ49_9CLOTGDP-mannose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=gmdPE=3SV=1;ENSG00000112699|ENST00000380815|GMDS	nc|ENSG00000112699|O60547-2|GMDS	nc|ENSG00000112699|O60547-2|GMDS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2988769412041	2	549.297507	1096.58046	1.4088	0.00077386	0.20899	0.0001148	1.6178	0.00088866	549.297997609488	45.612	0.47812	47.582	47.28	47.758	1.9703					39	14	4	0	0	0	0.03071	2	19074	19074;19126		86.332	23.759	1	7832400			5745	1793	2827	2845	7092;7093	7092					0.03603493900232024
FLLEKGYEV	9	Unmodified	_FLLEKGYEV_					0	0	0		nc|ENSG00000112699|O60547-2|GMDS;tr|A0A7D6VQ49|A0A7D6VQ49_9CLOTGDP-mannose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=gmdPE=3SV=1;ENSG00000112699|ENST00000380815|GMDS	nc|ENSG00000112699|O60547-2|GMDS	nc|ENSG00000112699|O60547-2|GMDS	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.297507	1096.58046	1.7251	0.00094759	1.3363	0.00073403	3.0614	0.0016816	549.2981973394939	47.633	0.3469	47.963	47.785	48.132	0.33034	-0.058101	0.0002819	NaN	72.968	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3105500			5746	1793	2827	2845							0.03603493900232024
FLLEKPFSV	9	Unmodified	_FLLEKPFSV_					0	0	0		nc|ENSG00000185238|O60678-2|PRMT3;ENSG00000185238|ENST00000331079|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3092529177666	2	540.310418	1078.60628	1.8728	0.0010119	-1.3288	-0.00071798	0.54394	0.0002939	540.3094423006952	63.47	0.31528	63.47	63.272	63.587	0					12	9	2	0	0	0	0.51189	1	26446	26446		14.838	2.3067	1	319310			5747	4735	2828	2846	7094	7094					0.07012388142516102
FLLEKPFSV	9	Unmodified	_FLLEKPFSV_					0	0	0		nc|ENSG00000185238|O60678-2|PRMT3;ENSG00000185238|ENST00000331079|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3129150271416	2	540.310418	1078.60628	3.0301	0.0016372	2.8236	0.0015256	5.8537	0.0031628	540.312096879328	61.633	0.7723	63.05	62.624	63.396	1.4177					39	24	3	0	0	0	0.21592	1	25854	25854		31.268	5.869	1	1225000			5748	4735	2828	2846	7095	7095					0.07012388142516102
FLLEKPFSV	9	Unmodified	_FLLEKPFSV_					0	0	0		nc|ENSG00000185238|O60678-2|PRMT3;ENSG00000185238|ENST00000331079|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	nc|ENSG00000185238|O60678-2|PRMT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3123046755791	2	540.310418	1078.60628	2.5073	0.0013547	3.8995	0.0021069	6.4067	0.0034616	540.3121536586101	61.113	0.43185	63.078	62.881	63.313	1.9653					30	13	3	0	0	0	0.23535	1	25618	25618		29.082	2.1979	1	1234000			5749	4735	2828	2846	7096	7096					0.07012388142516102
FLLEKVHIVGL	11	Unmodified	_FLLEKVHIVGL_					0	0	0		ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2644531130791	3	423.263941	1266.76999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.46	1	66.46	65.96	66.96	0								0	0	0	0.63775	1	27683	27683		3.0723	0.98626	1				5750	6983	2829	2847	7097	7097					0.14727985913418706
FLLEKVHIVGL	11	Unmodified	_FLLEKVHIVGL_					0	0	0		ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.2650634646416	3	423.263941	1266.76999	3.112	0.0013172	-0.8849	-0.00037455	2.2271	0.00094266	423.26337656967905	64.584	0.36873	65.991	65.77	66.139	1.4071					23	11	3	0	0	0	0.50816	1	27063	27063		23.801	11.626	1	1473300			5751	6983	2829	2847	7098	7098					0.14727985913418706
FLLEKVHIVGL	11	Unmodified	_FLLEKVHIVGL_					0	0	0		ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	423.263941	1266.76999	0.85212	0.00036067	-1.0856	-0.0004595	-0.23348	-9.8825E-05	423.2638460759909	66.431	0.1298	66.431	66.318	66.448	0	0.30087	-0.0005356	NaN	23.801	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526870			5752	6983	2829	2847							0.14727985913418706
FLLEKVHIVGL	11	Unmodified	_FLLEKVHIVGL_					0	0	0		ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	423.263941	1266.76999	2.2306	0.00094413	0.87232	0.00036922	3.1029	0.0013134	423.2646112183805	65.841	0.22189	66.165	66.083	66.305	0.32449	0.035408	0.0019505	NaN	23.801	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	447640			5753	6983	2829	2847							0.14727985913418706
FLLEKVHIVGL	11	Unmodified	_FLLEKVHIVGL_					0	0	0		ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	ENST00000502869.5_2_4:71768157-71808564:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	423.263941	1266.76999	2.7973	0.001184	-0.33368	-0.00014123	2.4636	0.0010428	423.26365961298023	64.004	0.31321	65.932	65.764	66.077	1.928	-0.19752	0.00041919	NaN	23.801	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1059700			5754	6983	2829	2847							0.14727985913418706
FLLEPQMKV	9	Unmodified	_FLLEPQMKV_					0	0	0		ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8114501833916	2	552.809728	1103.6049	1.3406	0.00074109	1.2122	0.0006701	2.5528	0.0014112	552.8104440939525	55.1	0.31517	56.505	56.355	56.67	1.4048					15	10	2	0	0	0	0.098163	1	23072	23072		49.933	13.889	1	1696000			5755	2970	2830	2848	7099	7099					0.05724430782106538
FLLEPQMKV	9	Unmodified	_FLLEPQMKV_					0	0	0		ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	ENSG00000141574|ENST00000269389|SECTM1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	552.809728	1103.6049	1.4463	0.00079954	0.39431	0.00021798	1.8406	0.0010175	552.8097558187375	54.603	0.22792	56.572	56.467	56.695	1.9684	0.033267	-0.0003061	NaN	49.933	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1302900			5756	2970	2830	2848							0.05724430782106538
FLLESTNKAS	10	Unmodified	_FLLESTNKAS_					0	0	0			REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.2944213747978	2	555.295496	1108.57644	1.3665	0.00075879	-1.2585	-0.00069885	0.10795	5.9946E-05	555.2939979106017	56.94	0.2301	56.94	56.81	57.041	0					13	7	2	0	0	0	0.87699	1	23790	23790		3.9444	0	1	1063600	+		5757	10481	2831	2849	7100	7100					0.026494044064975242
FLLESTNKAS	10	Unmodified	_FLLESTNKAS_					0	0	0			REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.2943603396416	2	555.295496	1108.57644	2.1785	0.0012097	-1.7568	-0.00097552	0.4217	0.00023417	555.2933250149598	56.657	0.20409	56.978	56.816	57.02	0.32103					11	6	2	0	0	0	0.846	1	23724	23724		7.2892	0	1	1100800	+		5758	10481	2831	2849	7101	7101					0.026494044064975242
FLLESTNKAS	10	Unmodified	_FLLESTNKAS_					0	0	0			REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	555.295496	1108.57644	1.3665	0.00075879	-1.2585	-0.00069885	0.10795	5.9946E-05	555.2939979106017	56.94	0.2301	56.94	56.81	57.041	0	-0.01909	0.00018726	NaN	7.2892	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1063600	+		5759	10481	2831	2849							0.026494044064975242
FLLESTNKAS	10	Unmodified	_FLLESTNKAS_					0	0	0			REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	REV__ENST00000442255.5_1_3:16313687-16345066:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	555.295496	1108.57644	2.1785	0.0012097	-1.7568	-0.00097552	0.4217	0.00023417	555.2933250149598	56.657	0.20409	56.978	56.816	57.02	0.32103	0.01909	-0.00036608	NaN	7.2892	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1100800	+		5760	10481	2831	2849							0.026494044064975242
FLLGGYLLF	9	Unmodified	_FLLGGYLLF_					0	0	0		ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474738.1_1_7:6624591-6628538:+|nuORF	ENSG00000136247|ENST00000335965|ZDHHC4	ENSG00000136247|ENST00000335965|ZDHHC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.3495971560478	2	521.802229	1041.5899	2.664	0.0013901	-2.7179	-0.0014182	-0.053938	-2.8145E-05	521.8009808876769	76.4	0.28194	77.694	77.575	77.857	1.2938					15	8	2	0	0	0	0.085957	1	32093	32093		28.173	0	1	819640			5761	2717	2832	2850	7102	7102					0.07077306976407272
FLLGGYLLF	9	Unmodified	_FLLGGYLLF_					0	0	0		ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000474738.1_1_7:6624591-6628538:+|nuORF	ENSG00000136247|ENST00000335965|ZDHHC4	ENSG00000136247|ENST00000335965|ZDHHC4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	521.802229	1041.5899	2.697	0.0014073	-3.2892	-0.0017163	-0.59229	-0.00030906	521.8005339617142	75.867	0.24342	77.635	77.507	77.751	1.7672	-0.029632	-0.00048176	NaN	28.173	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533760			5762	2717	2832	2850							0.07077306976407272
FLLGKEVSL	9	Unmodified	_FLLGKEVSL_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3036376833916	2	503.302593	1004.59063	1.9256	0.00096917	-0.70172	-0.00035318	1.2239	0.000616	503.3022823616381	57.549	0.26503	57.549	57.425	57.69	0					15	8	2	0	0	0	0.12216	1	24010	24010		41.956	3.9816	1	2529200			5763	4990	2833	2851	7103	7103					0.08852101625473097
FLLGKEVSL	9	Unmodified	_FLLGKEVSL_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3027221560478	2	503.302593	1004.59063	-0.014614	-7.3553E-06	0.43606	0.00021947	0.42144	0.00021211	503.30278936818735	55.346	0.16586	57.315	57.219	57.385	1.9684					12	9	2	0	0	0	0.050451	1	23194	23194		67.838	15.57	1	7326400			5764	4990	2833	2851	7104	7104					0.08852101625473097
FLLGKEVSL	9	Unmodified	_FLLGKEVSL_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	503.302593	1004.59063	2.7504	0.0013843	-2.4439	-0.00123	0.30642	0.00015422	503.3013558652351	56.993	0.26901	57.314	57.231	57.5	0.32103	-0.078719	-0.0015744	NaN	67.838	14	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1718600			5765	4990	2833	2851							0.08852101625473097
FLLGPEGQHLL	11	Unmodified	_FLLGPEGQHLL_					0	0	0		ENST00000526007.5_1_8:145058131-145058521:-|nuORF;ENSG00000178685|ENST00000313028|PARP10	ENST00000526007.5_1_8:145058131-145058521:-|nuORF	ENST00000526007.5_1_8:145058131-145058521:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	612.3433715701103	2	612.342781	1222.67101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.31	1	63.64	63.14	64.14	0.32974								0	0	0	0.63767	1	26523	26523		19.362	7.1213	1				5766	4489	2834	2852	7105	7105					0.06857962948538443
FLLGPRLVLA	10	Unmodified	_FLLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	549.8564941287041	2	549.855327	1097.6961	1.4356	0.00078937	0.37372	0.00020549	1.8093	0.00099486	549.8555609969138	73.842	0.62595	73.842	73.58	74.206	0					66	19	5	0	0	0	0.092962	3	30700	30700;30750;30789		65.235	34.598	1	45548000			5767	4139	2835	2853	7106;7107;7108	7106					0.15116062541756037
FLLGPRLVLA	10	Unmodified	_FLLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	549.8566772341728	2	549.855327	1097.6961	2.1788	0.001198	-1.3751	-0.00075608	0.80377	0.00044196	549.8545793496913	73.24	0.76387	73.565	73.244	74.008	0.32494					76	24	5	0	0	0	0.066517	2	30592	30592;30642		71.922	35.795	1	60795000			5768	4139	2835	2853	7109;7110	7109					0.15116062541756037
FLLGPRLVLA	10	Unmodified	_FLLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8567382693291	2	549.855327	1097.6961	1.7318	0.00095226	1.0321	0.00056752	2.764	0.0015198	549.8560508573175	71.953	0.98583	73.295	73.03	74.016	1.3415					92	31	5	0	0	0	0.043055	4	30187	30138;30187;30226;30265		81.89	38.032	1	159940000			5769	4139	2835	2853	7111;7112;7113;7114	7112					0.15116062541756037
FLLGPRLVLA	10	Unmodified	_FLLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.8558837771416	2	549.855327	1097.6961	1.7656	0.00097084	-0.40035	-0.00022013	1.3653	0.00075071	549.8551950220003	71.51	1.0525	73.334	72.972	74.024	1.824					101	33	5	0	0	0	0.043055	4	29963	29914;29963;30002;30041		81.89	45.763	1	116350000			5770	4139	2835	2853	7115;7116;7117;7118	7116					0.15116062541756037
FLLGSEIKL	9	Unmodified	_FLLGSEIKL_					0	0	0		TBC1D8B|p.F291Lfs*9|1|0.09|ENSG00000133138|chrX:106826070-106826070|T/-|frameshift_variant;nc|ENSG00000133138|Q0IIM8-2|TBC1D8B;nc|ENSG00000133138|Q0IIM8-3|TBC1D8B;ENSG00000133138|ENST00000357242|TBC1D8B	TBC1D8B|p.F291Lfs*9|1|0.09|ENSG00000133138|chrX:106826070-106826070|T/-|frameshift_variant	TBC1D8B|p.F291Lfs*9|1|0.09|ENSG00000133138|chrX:106826070-106826070|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3110229372978	2	510.310418	1018.60628	2.451	0.0012508	-0.68337	-0.00034873	1.7676	0.00090203	510.31046006666696	65.956	1.2502	67.355	66.817	68.068	1.3989					112	40	6	0	0	0	0.1388	1	27931	27931		39.95	7.6442	1	361120000			5771	2563	2836	2854	7119	7119					0.09772388142516775
FLLHIQQQV	9	Unmodified	_FLLHIQQQV_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.8269531130791	2	563.324391	1124.63423	1.6249	0.00091535	-0.29466	-0.00016599	1.3302	0.00074936	563.3247175255544	49.735	0.28104	49.735	49.593	49.874	0					15	8	3	0	0	0	0.15478	2	20745	20745;20789		38.151	17.385	1	956500			5772	1832	2837	2855	7120;7121	7120					0.0768971112258896
FLLHIQQQV	9	Unmodified	_FLLHIQQQV_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3248779177666	2	563.324391	1124.63423	1.6435	0.00092585	0.52073	0.00029334	2.1643	0.0012192	563.3249448462417	49.207	0.26751	49.538	49.383	49.651	0.33019					18	8	3	0	0	0	0.15478	2	20647	20597;20647		38.151	24.245	1	1001800			5773	1832	2837	2855	7122;7123	7123					0.0768971112258896
FLLHIQQQV	9	Unmodified	_FLLHIQQQV_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3239013552666	2	563.324391	1124.63423	2.2216	0.0012515	-4.0019	-0.0022544	-1.7803	-0.0010029	563.3214956996026	47.775	0.49938	49.157	48.922	49.421	1.3825					21	15	2	0	0	0	0.02596	2	19992	19992;20040		93.883	40.051	1	5699700			5774	1832	2837	2855	7124;7125	7124					0.0768971112258896
FLLHIQQQV	9	Unmodified	_FLLHIQQQV_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3228637576103	2	563.324391	1124.63423	2.5974	0.0014632	-4.222	-0.0023784	-1.6246	-0.0009152	563.3213504973231	47.291	0.52351	49.267	49.063	49.587	1.976					24	16	2	0	0	0	0.087207	2	19785	19785;19832		53.576	22.307	1	5524500			5775	1832	2837	2855	7126;7127	7126					0.0768971112258896
FLLIIRQV	8	Unmodified	_FLLIIRQV_					0	0	0		tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2918884158134	2	501.328945	1000.64334	3.9041	0.0019573	-2.6025	-0.0013047	1.3016	0.00065253	501.32770333313056	81.965	0.37192	83.177	82.945	83.317	1.2125					18	11	2	0	0	0	2.3239	1	34379	34379		18.135	2.2878	1	759210			5776	16370	2838	2856	7128	7128					0.14304104478935642
FLLIIRQV	8	Unmodified	_FLLIIRQV_					0	0	0		tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	tr|A0A553SM66|A0A553SM66_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21985PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	501.328945	1000.64334	3.3798	0.0016944	-1.8669	-0.00093591	1.5129	0.00075847	501.3277401900712	81.455	0.33709	83.151	82.983	83.32	1.6959	-0.013109	0.00043445	NaN	18.135	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818590			5777	16370	2838	2856							0.14304104478935642
FLLLVACVP	9	Unmodified	_FLLLVACVP_					0	0	0			REV__ENST00000563635.5_1_13:76123956-76287321:+|nuORF	REV__ENST00000563635.5_1_13:76123956-76287321:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7925598025322	2	487.790807	973.56706	2.644	0.0012897	-0.40256	-0.00019637	2.2414	0.0010933	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.75267	1	27070	27070		5.2307	0	1	1452800	+		5778	9527	2839	2857	7129	7129					0.07921964587285402
FLLNQSFTTF	10	Unmodified	_FLLNQSFTTF_					0	0	0		tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3181030154228	2	609.313689	1216.61282	1.5667	0.00095464	1.1988	0.00073044	2.7655	0.0016851	609.3143783382296	68.681	0.39575	70.534	70.313	70.709	1.853					30	12	3	0	0	0	0.73251	2	28775	28775;28829		16.942	2.104	1	4666300			5779	16630	2840	2858	7130;7131	7130					0.013182813032244667
FLLPDVIRI	9	Unmodified	_FLLPDVIRI_					0	0	0		nc|ENSG00000107021|Q9NVG8-3|TBC1D13;nc|ENSG00000107021|Q9NVG8-2|TBC1D13;ENSG00000107021|ENST00000372648|TBC1D13	nc|ENSG00000107021|Q9NVG8-3|TBC1D13	nc|ENSG00000107021|Q9NVG8-3|TBC1D13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3406249880791	2	543.33951	1084.66447	3.0843	0.0016758	0.28744	0.00015618	3.3718	0.001832	543.339255499275	82.764	0.2518	83.976	83.795	84.046	1.2125					12	7	2	0	0	0	0.35391	1	34733	34733		22.736	1.8651	1	743570			5780	1590	2841	2859	7132	7132					0.12552069787784603
FLLPDVIRI	9	Unmodified	_FLLPDVIRI_					0	0	0		nc|ENSG00000107021|Q9NVG8-3|TBC1D13;nc|ENSG00000107021|Q9NVG8-2|TBC1D13;ENSG00000107021|ENST00000372648|TBC1D13	nc|ENSG00000107021|Q9NVG8-3|TBC1D13	nc|ENSG00000107021|Q9NVG8-3|TBC1D13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3442260622978	2	543.33951	1084.66447	3.365	0.0018284	1.1277	0.00061273	4.4927	0.0024411	543.3400784633801	82.241	0.28268	83.911	83.799	84.081	1.67					13	8	2	0	0	0	0.35391	1	34483	34483		22.736	1.8651	1	601960			5781	1590	2841	2859	7133	7133					0.12552069787784603
FLLPHPGLKV	10	Unmodified	_FLLPHPGLKV_					0	0	0		nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2335388064384	3	374.234093	1119.68045	-0.25147	-9.411E-05	1.0214	0.00038226	0.76997	0.00028815	374.2349577952783	50.121	0.40651	50.121	49.903	50.309	0					27	13	3	0	0	0	0.70618	1	20932	20932		15.739	3.498	1	2253000			5782	2084	2842	2860	7134	7134					0.1253977602470968
FLLPHPGLKV	10	Unmodified	_FLLPHPGLKV_					0	0	0		nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2351257205009	3	374.234093	1119.68045	1.5934	0.00059631	1.212	0.00045357	2.8054	0.0010499	374.2348641249524	49.509	0.39423	49.84	49.623	50.017	0.33019					26	12	3	0	0	0	0.47063	1	20753	20753		19.626	10.082	1	2217500			5783	2084	2842	2860	7135	7135					0.1253977602470968
FLLPHPGLKV	10	Unmodified	_FLLPHPGLKV_					0	0	0		nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2346374392509	3	374.234093	1119.68045	0.92097	0.00034466	1.0362	0.0003878	1.9572	0.00073246	374.2346439518978	48.125	0.59186	49.513	49.272	49.864	1.388					47	18	4	0	0	0	0.24174	3	20146	20096;20146;20187		30.703	11.267	1	5211800			5784	2084	2842	2860	7136;7137;7138	7137					0.1253977602470968
FLLPHPGLKV	10	Unmodified	_FLLPHPGLKV_					0	0	0		nc|ENSG00000119787|Q8NHH9-3|ATL2;nc|ENSG00000198513|Q8WXF7-2|ATL1;ENSG00000198513|ENST00000358385|ATL1;nc|ENSG00000119787|Q8NHH9-5|ATL2;nc|ENSG00000119787|Q8NHH9-4|ATL2;nc|ENSG00000119787|Q8NHH9-2|ATL2;ENSG00000119787|ENST00000378954|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	nc|ENSG00000119787|Q8NHH9-3|ATL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2353088259697	3	374.234093	1119.68045	2.2644	0.0008474	-0.66525	-0.00024896	1.5991	0.00059844	374.23392984306645	47.568	0.3691	49.544	49.374	49.743	1.976					32	11	4	0	0	0	0.47063	2	19899	19899;19955		19.626	10.082	1	5484000			5785	2084	2842	2860	7139;7140	7139					0.1253977602470968
FLLPHPGLQV	10	Unmodified	_FLLPHPGLQV_					0	0	0		ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8320190310478	2	560.829309	1119.64407	1.6755	0.00093965	2.3034	0.0012918	3.9789	0.0022315	560.8308308258025	62.554	0.33938	62.554	62.399	62.739	0					21	10	3	0	0	0	0.42124	2	26058	26058;26105		46.021	22.873	1	961440			5786	4707	2843	2861	7141;7142	7141					0.08902899127997443
FLLPHPGLQV	10	Unmodified	_FLLPHPGLQV_					0	0	0		ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8324462771416	2	560.829309	1119.64407	3.3126	0.0018578	3.5799	0.0020077	6.8925	0.0038655	560.8311911926554	60.729	0.38203	62.149	61.995	62.377	1.4196					23	11	3	0	0	0	0.06111	1	25460	25460		100.37	36.135	1	2884800			5787	4707	2843	2861	7143	7143					0.08902899127997443
FLLPILSQI	9	Unmodified	_FLLPILSQI_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y;ENST00000472510.5_1_Y:15024878-15026576:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.8317138552666	2	522.328611	1042.64267	3.1976	0.0016702	-2.7761	-0.0014501	0.4215	0.00022016	522.3270968994739	98.225	0.11634	98.481	98.417	98.534	0.25636					9	3	3	0	0	0	0.0054014	1	41328	41328		120.45	27.628	1	7608900			5788	815	2844	2862	7144	7144					0.12305265039231017
FLLPILSQI	9	Unmodified	_FLLPILSQI_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y;ENST00000472510.5_1_Y:15024878-15026576:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	522.328611	1042.64267	3.6913	0.0019281	-4.2964	-0.0022441	-0.60503	-0.00031602	522.3267324734617	98.285	0.11745	98.512	98.439	98.556	0.22776	0.015587	-0.0011685	NaN	120.45	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7317200			5789	815	2844	2862							0.12305265039231017
FLLPLRIAL	9	Unmodified	_FLLPLRIAL_					0	0	0		ENSG00000158669|ENST00000396987|GPAT4	ENSG00000158669|ENST00000396987|GPAT4	ENSG00000158669|ENST00000396987|GPAT4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.7842285037041	2	528.35242	1054.69029	5.7563	0.0030414	-0.33296	-0.00017592	5.4234	0.0028654	528.3526154987704	88.463	0.28934	89.519	89.369	89.659	1.0562					12	8	2	0	0	0	0.11463	1	37279	37279		12.532	0	1	388930			5790	3505	2845	2863	7145	7145					0.16512964030061994
FLLPLRIAL	9	Unmodified	_FLLPLRIAL_					0	0	0		ENSG00000158669|ENST00000396987|GPAT4	ENSG00000158669|ENST00000396987|GPAT4	ENSG00000158669|ENST00000396987|GPAT4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.7881347537041	2	528.35242	1054.69029	4.8052	0.0025389	-0.23198	-0.00012257	4.5733	0.0024163	528.3522479726618	88.013	0.25633	89.46	89.316	89.572	1.4467					11	7	2	0	0	0	0.11645	1	37051	37051		8.5933	0	1	429650			5791	3505	2845	2863	7146	7146					0.16512964030061994
FLLRHHKVWRK	11	Unmodified	_FLLRHHKVWRK_					0	0	0		ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124140|Q9H2X9|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3127014040947	3	507.308878	1518.90481	2.9027	0.0014725	3.1283	0.001587	6.0309	0.0030596	507.3103290051984	88.586	1.7488	88.821	88.069	89.818	0.23471					65	54	2	0	0	0	1.0402	1	37143	37143		0.094841	0.094841	1	990610			5792	2206	2846	2864	7147	7147					0.16610903898526885
FLLRHHKVWRK	11	Unmodified	_FLLRHHKVWRK_					0	0	0		ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124140|Q9H2X9|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.7557250857353	3	507.308878	1518.90481	4.8964	0.002484	1.9274	0.00097779	6.8238	0.0034618	507.31005736240303	90.178	0.50996	91.197	90.958	91.468	1.0199					39	15	4	0	0	0	0.14606	1	37917	37917		0.50596	0.09769	1	887300			5793	2206	2846	2864	7148	7148					0.16610903898526885
FLLRHHKVWRK	11	Unmodified	_FLLRHHKVWRK_					0	0	0		ENSG00000124140|ENST00000243964|SLC12A5;nc|ENSG00000124140|Q9H2X9|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	ENSG00000124140|ENST00000243964|SLC12A5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.7557250857353	3	507.308878	1518.90481	5.3531	0.0027157	2.5741	0.0013059	7.9272	0.0040216	507.3102252005637	89.917	0.75404	90.937	90.268	91.022	1.0199					41	23	2	0	0	0	0.14606	1	37917	37917		0.50596	0.09769	1	1543500			5794	2206	2846	2864	7149	7149					0.16610903898526885
FLLRKESI	8	Unmodified	_FLLRKESI_					0	0	0		nc|ENSG00000119684|Q9UHC1-2|MLH3;ENSG00000119684|ENST00000355774|MLH3;MLH3|p.S680Rfs*5|1|0.07|ENSG00000119684|chr14:75047616-75047617|-/AC|frameshift_variant;MLH3|p.P863Hfs*9|1|0.09|ENSG00000119684|chr14:75047068-75047069|-/ATCTCATGCACAT|frameshift_variant;MLH3|p.D939Efs*7|1|0.09|ENSG00000119684|chr14:75046839-75046840|-/C|frameshift_variant	nc|ENSG00000119684|Q9UHC1-2|MLH3	nc|ENSG00000119684|Q9UHC1-2|MLH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3098327517509	2	503.30821	1004.60187	0.65919	0.00033178	0.053373	2.6863E-05	0.71257	0.00035864	503.3083083523408	56.699	0.20509	58.668	58.516	58.721	1.9684					11	6	2	0	0	0	0.66196	1	23783	23783		34.102	0	1	1182600			5795	2079	2847	2865	7150	7150					0.09974923719619255
FLLSEPVAL	9	Unmodified	_FLLSEPVAL_					0	0	0		nc|ENSG00000205336|Q9Y653-5|ADGRG1;nc|ENSG00000205336|Q9Y653-4|ADGRG1;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENSG00000205336|ENST00000562631|ADGRG1;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.3283874392509	2	494.789318	987.564084	1.7556	0.00086865	1.2424	0.00061473	2.998	0.0014834	494.78999850544307	77.949	0.34216	79.7	79.59	79.932	1.7514					19	10	2	0	0	0	0.032748	1	32726	32726		53.576	0	1	717130			5796	5177	2848	2866	7151	7151					0.06980412734139918
FLLSEPVAL	9	Unmodified	_FLLSEPVAL_					0	0	0		nc|ENSG00000205336|Q9Y653-5|ADGRG1;nc|ENSG00000205336|Q9Y653-4|ADGRG1;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENSG00000205336|ENST00000562631|ADGRG1;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	494.789318	987.564084	1.4765	0.00073056	-2.7639	-0.0013675	-1.2874	-0.00063697	494.7867561939173	80.058	0.21564	80.058	79.887	80.102	0	0.22797	-0.0034294	NaN	53.576	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	438110			5797	5177	2848	2866							0.06980412734139918
FLLSEPVAL	9	Unmodified	_FLLSEPVAL_					0	0	0		nc|ENSG00000205336|Q9Y653-5|ADGRG1;nc|ENSG00000205336|Q9Y653-4|ADGRG1;ENST00000565539.5_1_16:57684180-57697491:+|nuORF;ENST00000564907.5_1_16:57684180-57697491:+|nuORF;ENSG00000205336|ENST00000562631|ADGRG1;nc|ENSG00000205336|Q9Y653-3|ADGRG1;nc|ENSG00000205336|Q9Y653|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	nc|ENSG00000205336|Q9Y653-5|ADGRG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	494.789318	987.564084	2.4249	0.0011998	0.07901	3.9093E-05	2.5039	0.0012389	494.78928524016175	79.466	0.25414	79.766	79.623	79.877	0.30047	-0.063611	-0.00061618	NaN	53.576	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793980			5798	5177	2848	2866							0.06980412734139918
FLLSRETRR	9	Unmodified	_FLLSRETRR_					0	0	0		ENST00000427259.1_1_9:98632604-98637316:-|nuORF	ENST00000427259.1_1_9:98632604-98637316:-|nuORF	ENST00000427259.1_1_9:98632604-98637316:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3441650271416	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.68551	1	31934	31934		7.9102	1.187	1	9601000			5799	6475	2849	2867	7152	7152					0.09147016757151505
FLLTERVWDWR	11	Unmodified	_FLLTERVWDWR_					0	0	0			REV__HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|160|3|anti-sense	REV__HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|160|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	760.7532226443291	2	760.904068	1519.79358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.913	1	97.198	96.698	97.698	0.28442								0	0	0	0.63774	1	40777	40777		8.1555	3.2585	1		+		5800	14219	2850	2868	7153	7153					0.05447799679927812
FLLTLAVRSS	10	Unmodified	_FLLTLAVRSS_					0	0	0		tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8320800662041	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.85124	1	29682	29682		6.7232	0.36906	1	5931400			5801	16628	2851	2869	7154	7154					0.10094577919812764
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(69)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.2891723513603	2	583.289159	1164.56377	2.0973	0.0012234	-0.75918	-0.00044282	1.3382	0.00078053	583.2883585500081	59.69	0.37522	59.69	59.512	59.887	0					22	17	2	0	0	0	0.04812	1	24887	24887		69.105	27.265	1	2334800			5802	842	2852	2870	7155	7155		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(69)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.2900878787041	2	583.289159	1164.56377	2.1496	0.0012539	0.15984	9.323E-05	2.3095	0.0013471	583.2888318251013	60.356	0.39919	60.356	60.174	60.573	0					33	12	4	0	0	0	0.04812	2	25182	25132;25182		69.105	28.042	1	2250000			5803	842	2852	2870	7156;7157	7157		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(79)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.2913085818291	2	583.289159	1164.56377	2.2204	0.0012952	0.26968	0.0001573	2.4901	0.0014525	583.2893449182413	59.723	0.31022	60.048	59.901	60.211	0.32553					24	9	3	0	0	0	0.037098	2	25042	24995;25042		78.728	28.795	1	1953000			5804	842	2852	2870	7158;7159	7159		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(110)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.2900268435478	2	583.289159	1164.56377	0.51864	0.00030252	0.42469	0.00024772	0.94333	0.00055024	583.2892651035252	57.99	0.16649	59.408	59.353	59.519	1.4181					11	7	2	0	0	0	0.010279	1	24322	24322		107.19	57.254	1	4360000			5805	842	2852	2870	7160	7160		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(69)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.2906982302666	2	583.289159	1164.56377	1.2665	0.00073873	1.8826	0.0010981	3.1491	0.0018369	583.2908946784978	58.611	0.535	60.029	59.845	60.38	1.4181					30	16	3	0	0	0	0.04812	2	24587	24540;24587		69.105	27.265	1	3647900			5806	842	2852	2870	7161;7162	7162		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(100)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.2886840701103	2	583.289159	1164.56377	0.95496	0.00055702	1.1964	0.00069783	2.1513	0.0012548	583.2902569570357	58.099	0.52729	60.068	59.901	60.429	1.969					29	16	3	0	0	0	0.019432	2	24393	24341;24393		99.799	49.866	1	5033600			5807	842	2852	2870	7163;7164	7164		13			-0.0119333025738797
FLMDFIHQV	9	Oxidation (M)	_FLM(Oxidation (M))DFIHQV_		FLM(1)DFIHQV		FLM(79)DFIHQV	0	0	1		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	583.2896606326103	2	583.289159	1164.56377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.484	1	59.452	58.952	59.952	1.9684								0	0	0	0.026088	1	24112	24112		78.728	28.795	1				5808	842	2852	2870	7165	7165		13			-0.0119333025738797
FLMDFIHQV	9	Unmodified	_FLMDFIHQV_					0	0	0		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.2928344607353	2	575.291702	1148.56885	1.7078	0.0009825	0.81831	0.00047077	2.5261	0.0014533	575.2918903496749	74.719	0.56453	74.719	74.462	75.027	0					48	17	4	0	0	0	0.033504	1	31091	31091		81.89	31.957	1	6950500			5809	842	2852	2871	7166	7166					0.0005097360524359829
FLMDFIHQV	9	Unmodified	_FLMDFIHQV_					0	0	0		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.2926513552666	2	575.291702	1148.56885	2.402	0.0013818	-0.063054	-3.6275E-05	2.3389	0.0013456	575.2914316609609	74.175	0.53806	74.5	74.265	74.803	0.32494					51	16	4	0	0	0	0.044893	3	30982	30982;31030;31069		71.922	30.083	1	9205200			5810	842	2852	2871	7167;7168;7169	7167					0.0005097360524359829
FLMDFIHQV	9	Unmodified	_FLMDFIHQV_					0	0	0		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2936279177666	2	575.291702	1148.56885	3.4381	0.0019779	-0.53103	-0.00030549	2.907	0.0016724	575.2914372678122	73.129	1.0348	74.459	74.164	75.198	1.3297					92	32	5	0	0	0	0.007852	4	30680	30634;30680;30719;30759		111.29	52.608	1	29490000			5811	842	2852	2871	7170;7171;7172;7173	7171					0.0005097360524359829
FLMDFIHQV	9	Unmodified	_FLMDFIHQV_					0	0	0		NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant;ENSG00000069248|ENST00000261396|NUP133	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2929565310478	2	575.291702	1148.56885	2.6877	0.0015462	-0.50515	-0.00029061	2.1826	0.0012556	575.2915598084493	72.59	1.5638	74.4	73.89	75.454	1.8101					102	49	5	0	0	0	0.01454	4	30457	30413;30457;30496;30538		103.75	37.521	1	29054000			5812	842	2852	2871	7174;7175;7176;7177	7175					0.0005097360524359829
FLMDPFAIH	9	Unmodified	_FLMDPFAIH_					0	0	0		ENST00000541346.1_1_12:6859683-6861527:-|nuORF;ENSG00000089693|ENST00000203630|MLF2	ENST00000541346.1_1_12:6859683-6861527:-|nuORF	ENST00000541346.1_1_12:6859683-6861527:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.3170043826103	2	545.773145	1089.53174	1.6145	0.00088115	3.2114	0.0017527	4.8259	0.0026338	545.7731512871394	71.63	0.25069	72.971	72.779	73.03	1.3415					13	7	2	0	0	0	0.079834	1	30083	30083		18.135	7.0205	1	490480			5813	1128	2853	2872	7178	7178					-0.009446979405083766
FLMEEVHMI	9	Unmodified	_FLMEEVHMI_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.7773925662041	2	574.77757	1147.54059	3.1313	0.0017998	-2.3855	-0.0013711	0.74583	0.00042869	574.7767415398171	62.3	0.60992	64.257	64.03	64.64	1.9571					34	19	3	0	0	0	0.078975	1	26098	26098		56.541	28.368	1	2026900			5814	1879	2854	2873	7179	7179					-0.02728092366328383
FLMEEVHMI	9	Unmodified	_FLMEEVHMI_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	574.77757	1147.54059	1.7496	0.0010056	1.9541	0.0011232	3.7037	0.0021288	574.7781022760557	64.576	0.16277	64.576	64.494	64.657	0	0.20469	0.0032214	NaN	56.541	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298280			5815	1879	2854	2873							-0.02728092366328383
FLMEEVHMI	9	Unmodified	_FLMEEVHMI_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	574.77757	1147.54059	1.793	0.0010306	1.8128	0.001042	3.6059	0.0020726	574.7785542748793	64.056	0.1604	64.385	64.305	64.466	0.32899	0.01438	0.0030591	NaN	56.541	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	371080			5816	1879	2854	2873							-0.02728092366328383
FLMEEVHMI	9	Unmodified	_FLMEEVHMI_					0	0	0		ENST00000437205.5_1_3:183639090-183689734:-|nuORF;nc|ENSG00000114770|O15440-5|ABCC5;ENSG00000114770|ENST00000334444|ABCC5	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	574.77757	1147.54059	2.8951	0.001664	-0.60424	-0.0003473	2.2908	0.0013167	575.2785257261497	62.853	0.6136	64.266	64.045	64.659	1.4134	-0.10504	0.00028049	NaN	56.541	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2715900			5817	1879	2854	2873							-0.02728092366328383
FLMMYHYL	8	Unmodified	_FLMMYHYL_					0	0	0		tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2657958865166	2	559.264099	1116.51364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.62	1	68.62	68.12	69.12	0								0	0	0	1.0178	1	28576	28576		11.114	1.767	1				5818	16204	2855	2874	7180	7180					-0.039951561868747376
FLNDEVWNL	9	Unmodified	_FLNDEVWNL_					0	0	0		ENST00000452420.5_1_21:34968037-34971579:-|nuORF;ENST00000437996.5_1_21:34962130-34971579:-|nuORF;CRYZL1|p.E309Rfs*18|1|0.06|ENSG00000205758|chr21:33591187-33591188|-/GAACTCCTGATCT|frameshift_variant;ENSG00000205758|ENST00000381554|CRYZL1	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.2843505740166	2	575.282389	1148.55022	1.646	0.00094692	1.1402	0.00065596	2.7863	0.0016029	575.2832263467353	78.026	0.37804	78.026	77.873	78.251	0					26	11	3	0	0	0	0.098163	1	32511	32511		49.933	30.494	1	1825600			5819	375	2856	2875	7181	7181					-0.01810864764956932
FLNDEVWNL	9	Unmodified	_FLNDEVWNL_					0	0	0		ENST00000452420.5_1_21:34968037-34971579:-|nuORF;ENST00000437996.5_1_21:34962130-34971579:-|nuORF;CRYZL1|p.E309Rfs*18|1|0.06|ENSG00000205758|chr21:33591187-33591188|-/GAACTCCTGATCT|frameshift_variant;ENSG00000205758|ENST00000381554|CRYZL1	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.2834350466728	2	575.282389	1148.55022	1.8288	0.0010521	0.81003	0.000466	2.6388	0.0015181	575.282915455329	77.618	0.40686	77.935	77.732	78.138	0.31653					28	12	3	0	0	0	0.073578	1	32451	32451		58.679	34.658	1	3702100			5820	375	2856	2875	7182	7182					-0.01810864764956932
FLNDEVWNL	9	Unmodified	_FLNDEVWNL_					0	0	0		ENST00000452420.5_1_21:34968037-34971579:-|nuORF;ENST00000437996.5_1_21:34962130-34971579:-|nuORF;CRYZL1|p.E309Rfs*18|1|0.06|ENSG00000205758|chr21:33591187-33591188|-/GAACTCCTGATCT|frameshift_variant;ENSG00000205758|ENST00000381554|CRYZL1	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2841064333916	2	575.282389	1148.55022	2.516	0.0014474	0.46646	0.00026835	2.9825	0.0017158	575.2824521868232	76.67	0.56278	77.964	77.699	78.262	1.2938					40	17	3	0	0	0	0.010279	2	32190	32152;32190		107.19	40.223	1	8965300			5821	375	2856	2875	7183;7184	7184					-0.01810864764956932
FLNDEVWNL	9	Unmodified	_FLNDEVWNL_					0	0	0		ENST00000452420.5_1_21:34968037-34971579:-|nuORF;ENST00000437996.5_1_21:34962130-34971579:-|nuORF;CRYZL1|p.E309Rfs*18|1|0.06|ENSG00000205758|chr21:33591187-33591188|-/GAACTCCTGATCT|frameshift_variant;ENSG00000205758|ENST00000381554|CRYZL1	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	ENST00000452420.5_1_21:34968037-34971579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2838622927666	2	575.282389	1148.55022	2.772	0.0015947	-1.0226	-0.0005883	1.7494	0.0010064	575.281884362917	76.149	0.4074	77.916	77.72	78.127	1.7672					39	12	4	0	0	0	0.026836	2	31970	31919;31970		92.491	45.571	1	6138900			5822	375	2856	2875	7185;7186	7186					-0.01810864764956932
FLNDRKTL	8	Unmodified	_FLNDRKTL_					0	0	0		tr|A0A7D6ZH01|A0A7D6ZH01_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21090PE=4SV=1	tr|A0A7D6ZH01|A0A7D6ZH01_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21090PE=4SV=1	tr|A0A7D6ZH01|A0A7D6ZH01_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.7900573611259	2	503.787641	1005.56073	2.199	0.0011078	1.6115	0.00081187	3.8105	0.0019197	503.7890853725801	82.54	0.18546	82.54	82.4	82.585	0					9	5	2	0	0	0	0.88409	1	34381	34381		6.3541	0	1	980980			5823	17079	2857	2876	7187	7187					0.05817162680148158
FLNGEVIRL	9	Unmodified	_FLNGEVIRL_					0	0	0		ENST00000477706.1_1_X:53458354-53459024:-|nuORF;nc|ENSG00000072506|Q99714-2|HSD17B10;ENSG00000072506|ENST00000168216|HSD17B10	ENST00000477706.1_1_X:53458354-53459024:-|nuORF	ENST00000477706.1_1_X:53458354-53459024:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8129150271416	2	530.811116	1059.60768	2.4735	0.001313	-0.96103	-0.00051013	1.5125	0.00080284	530.8117838045112	57.624	0.31631	57.947	57.76	58.077	0.32299					15	9	2	0	0	0	0.20244	1	24129	24129		32.786	8.7651	1	1148300			5824	885	2858	2877	7188	7188					0.0802602223127451
FLNGEVIRL	9	Unmodified	_FLNGEVIRL_					0	0	0		ENST00000477706.1_1_X:53458354-53459024:-|nuORF;nc|ENSG00000072506|Q99714-2|HSD17B10;ENSG00000072506|ENST00000168216|HSD17B10	ENST00000477706.1_1_X:53458354-53459024:-|nuORF	ENST00000477706.1_1_X:53458354-53459024:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	530.811116	1059.60768	1.985	0.0010537	1.142	0.00060619	3.127	0.0016599	530.8118927986055	58.059	0.28834	58.059	57.978	58.266	0	0.055714	0.00089457	NaN	32.786	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	763420			5825	885	2858	2877							0.0802602223127451
FLNLERLP	8	Unmodified	_FLNLERLP_					0	0	0		ENST00000472667.1_1_2:170355634-170355844:+|nuORF	ENST00000472667.1_1_2:170355634-170355844:+|nuORF	ENST00000472667.1_1_2:170355634-170355844:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2920104861259	2	501.292559	1000.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.989	1	66.989	66.489	67.489	0								0	0	0	1.0178	1	27899	27899		2.5775	0	1				5826	6757	2859	2878	7189	7189					0.07030350685522535
FLNLLPVEA	9	Unmodified	_FLNLLPVEA_					0	0	0		ENSG00000082996|ENST00000392894|RNF13;ENST00000481241.1_1_3:180491477-180491675:-|nuORF	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2977783083916	2	508.294768	1014.57498	3.9339	0.0019996	3.0473	0.0015489	6.9812	0.0035485	508.29608984110916	82.452	0.32082	83.664	83.505	83.826	1.2125					21	9	3	0	0	0	0.033794	1	34613	34613		81.613	20.256	1	1925100			5827	1036	2860	2879	7190	7190					0.06827815108420054
FLNLLPVEA	9	Unmodified	_FLNLLPVEA_					0	0	0		ENSG00000082996|ENST00000392894|RNF13;ENST00000481241.1_1_3:180491477-180491675:-|nuORF	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7977172732353	2	508.294768	1014.57498	3.8708	0.0019675	2.3659	0.0012026	6.2367	0.0031701	508.2962648213646	81.939	0.28438	83.609	83.482	83.766	1.67					13	8	2	0	0	0	0.49082	1	34375	34375		15.847	5.0233	1	862230			5828	1036	2860	2879	7191	7191					0.06827815108420054
FLNLLPVEA	9	Unmodified	_FLNLLPVEA_					0	0	0		ENSG00000082996|ENST00000392894|RNF13;ENST00000481241.1_1_3:180491477-180491675:-|nuORF	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1015.593798816204	1	1015.58226	1014.57498	3.6317	0.0036883	4.1855	0.0042508	7.8173	0.0079391	1015.5864937531151	81.985	0.19193	83.655	83.607	83.799	1.67					6	5	2	0	0	0	0.042029	1	34400	34400		74.423	19.649	1	769570			5829	1036	2860	2879	7192	7192					0.06827815108420054
FLNNQEYVL	9	Unmodified	_FLNNQEYVL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.2925903201103	2	570.290214	1138.56587	1.7806	0.0010155	1.3561	0.00077336	3.1367	0.0017888	570.2911958376063	59.307	0.25449	59.307	59.226	59.481	0					13	7	2	0	0	0	0.46905	1	24740	24740		16.942	6.1184	1	1264600			5830	1912	2861	2880	7193	7193					0.0021342175209611014
FLNNQEYVL	9	Unmodified	_FLNNQEYVL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.2916137576103	2	570.290214	1138.56587	2.3658	0.0013492	0.90336	0.00051518	3.2692	0.0018644	570.2903656719575	58.886	0.2452	59.211	59.056	59.301	0.32553					15	7	3	0	0	0	0.46905	1	24679	24679		16.942	6.1184	1	1239300			5831	1912	2861	2880	7194	7194					0.0021342175209611014
FLNPDEVHAI	10	Unmodified	_FLNPDEVHAI_					0	0	0		nc|ENSG00000101447|Q9H4H8-2|FAM83D;ENSG00000101447|ENST00000619850|FAM83D	nc|ENSG00000101447|Q9H4H8-2|FAM83D	nc|ENSG00000101447|Q9H4H8-2|FAM83D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7955810427666	2	577.795663	1153.57677	2.2179	0.0012815	-3.3769	-0.0019511	-1.159	-0.00066965	577.7927389053805	43.99	0.2543	45.934	45.799	46.053	1.9438					13	7	2	0	0	0	0.72878	1	18458	18458		17.113	0.026346	1	560250			5832	1352	2862	2881	7195	7195					0.006128241263922973
FLNRRRRRER	10	Unmodified	_FLNRRRRRER_					0	0	0		ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.9599792361259	3	486.95902	1457.85523	2.3899	0.0011638	0.5221	0.00025424	2.912	0.001418	486.9592425722195	88.983	1.9506	88.983	88.274	90.225	0					145	61	3	0	0	0	0.89803	1	37217	37217		0.13989	0	1	2426300			5833	3269	2863	2882	7196	7196					0.1446158894243581
FLNWQDAI	8	Unmodified	_FLNWQDAI_					0	0	0		ENST00000313737.5_1_12:31477768-31478254:+|nuORF	ENST00000313737.5_1_12:31477768-31478254:+|nuORF	ENST00000313737.5_1_12:31477768-31478254:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	503.2172729372978	2	503.753267	1005.49198	1.3233	0.00066661	-1.6059	-0.00080897	-0.2826	-0.00014236	503.7519802481758	77.822	0.2168	79.574	79.437	79.654	1.7514					8	6	2	0	0	0	2.3239	1	32669	32669		2.8892	0	1	264290			5834	5817	2864	2883	7197	7197					-0.010545016195919743
FLPARHNSF	9	Unmodified	_FLPARHNSF_					0	0	0			REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7861816287041	2	544.785433	1087.55631	3.5855	0.0019533	-3.5468	-0.0019323	0.038631	2.1046E-05	544.78306477444	81.809	0.49486	83.022	82.728	83.223	1.2125					36	15	3	0	0	0	0.22154	2	34366	34303;34366		30.637	2.2098	1	3689200	+		5835	14056	2865	2884	7198;7199	7199					0.016036982572359193
FLPARHNSF	9	Unmodified	_FLPARHNSF_					0	0	0			REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	544.785433	1087.55631	1.9952	0.001087	-1.4845	-0.00080874	0.51069	0.00027821	544.7846305761838	83.273	0.27438	83.273	83.076	83.35	0	0.17819	0.00044629	NaN	30.637	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	849970	+		5836	14056	2865	2884							0.016036982572359193
FLPARHNSF	9	Unmodified	_FLPARHNSF_					0	0	0			REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	REV__ENST00000592859.1_1_19:9869411-9879277:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.785433	1087.55631	3.5855	0.0019533	-3.5468	-0.0019323	0.038631	2.1046E-05	544.78306477444	81.809	0.49486	83.022	82.728	83.223	1.2125	-0.073481	-0.0018008	NaN	30.637	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3689200	+		5837	14056	2865	2884							0.016036982572359193
FLPDAERFL	9	Unmodified	_FLPDAERFL_					0	0	0		ENST00000251181.8_1_14:105360511-105361292:+|nuORF;nc|ENSG00000099814|Q9Y4F5-3|CEP170B;ENSG00000099814|ENST00000414716|CEP170B;nc|ENSG00000099814|Q9Y4F5|CEP170B	ENST00000251181.8_1_14:105360511-105361292:+|nuORF	ENST00000251181.8_1_14:105360511-105361292:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2964965701103	2	554.295299	1106.57605	2.3788	0.0013185	0.31084	0.0001723	2.6896	0.0014908	554.2954809400811	59.895	0.36497	61.314	61.084	61.449	1.4196					26	11	3	0	0	0	0.3091	2	25136	25087;25136		24.991	4.5947	1	2655500			5838	1217	2866	2885	7200;7201	7201					0.027020294773365094
FLPDAERFL	9	Unmodified	_FLPDAERFL_					0	0	0		ENST00000251181.8_1_14:105360511-105361292:+|nuORF;nc|ENSG00000099814|Q9Y4F5-3|CEP170B;ENSG00000099814|ENST00000414716|CEP170B;nc|ENSG00000099814|Q9Y4F5|CEP170B	ENST00000251181.8_1_14:105360511-105361292:+|nuORF	ENST00000251181.8_1_14:105360511-105361292:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2962524294853	2	554.295299	1106.57605	2.6393	0.0014629	-0.58595	-0.00032479	2.0533	0.0011382	554.295495858554	59.396	0.32847	61.365	61.193	61.522	1.969					27	10	3	0	0	0	0.25667	2	24902	24902;24965		27.629	11.782	1	2539100			5839	1217	2866	2885	7202;7203	7202					0.027020294773365094
FLPFTDLSL	9	Unmodified	_FLPFTDLSL_					0	0	0			REV__HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|126|2|anti-sense	REV__HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|126|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.8405029177666	2	526.786776	1051.559	0.7213	0.00037997	-4.3031	-0.0022668	-3.5818	-0.0018869	526.7836087493159	53.202	0.16012	54.602	54.473	54.633	1.4005					6	4	2	0	0	0	0.1006	1	22252	22252		21.747	7.8406	1	986210	+		5840	14218	2867	2886	7204	7204					0.035281088715237274
FLPHLWKVK	9	Unmodified	_FLPHLWKVK_					0	0	0		ENST00000322353.3_1_2:109123982-109124054:-|nuORF	ENST00000322353.3_1_2:109123982-109124054:-|nuORF	ENST00000322353.3_1_2:109123982-109124054:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3578979372978	2	584.355494	1166.69644	3.3962	0.0019846	0.98179	0.00057371	4.378	0.0025583	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.84963	1	30869	30869		0.6015	0	1	5910500			5841	5857	2868	2887	7205	7205					0.11975482261595971
FLPHLWKVK	9	Unmodified	_FLPHLWKVK_					0	0	0		ENST00000322353.3_1_2:109123982-109124054:-|nuORF	ENST00000322353.3_1_2:109123982-109124054:-|nuORF	ENST00000322353.3_1_2:109123982-109124054:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3580200076103	2	584.355494	1166.69644	2.7115	0.0015845	0.99353	0.00058057	3.705	0.0021651	584.3563008001049	73.616	1.4667	75.413	74.402	75.869	1.7962					117	46	3	0	0	0	0.82604	1	30623	30623		2.3027	0	1	4708700			5842	5857	2868	2887	7206	7206					0.11975482261595971
FLPNKFLIQ	9	Unmodified	_FLPNKFLIQ_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|278|2|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|278|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	560.2934448122978	2	560.331685	1118.64882	1.8731	0.0010496	-3.4525	-0.0019345	-1.5793	-0.00088496	560.3292493282892	61.958	0.46838	62.288	62.012	62.48	0.32974					30	14	3	0	0	0	0.11684	1	26013	26013		7.9102	0	1	992670	+		5843	14259	2869	2888	7207	7207					0.09423783270767672
FLPPLPTSV	9	Unmodified	_FLPPLPTSV_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.7845947146416	2	485.784036	969.553519	2.7879	0.0013543	-2.9626	-0.0014392	-0.17471	-8.4872E-05	485.78246512365274	72.684	0.16045	73.009	72.954	73.114	0.32494					6	4	2	0	0	0	0.34572	1	30430	30430		23.148	9.6405	1	379340			5844	828	2870	2889	7208	7208					0.06752430079711758
FLPPLPTSV	9	Unmodified	_FLPPLPTSV_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7841979861259	2	485.784036	969.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.605	1	72.947	72.447	73.447	1.3415								0	0	0	0.24103	1	30053	30053		23.148	0	1				5845	828	2870	2889	7209	7209					0.06752430079711758
FLPPLPTSV	9	Unmodified	_FLPPLPTSV_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7837402224541	2	485.784036	969.553519	0.95433	0.0004636	2.2359	0.0010862	3.1902	0.0015498	485.7844969067628	70.889	0.30215	72.727	72.653	72.955	1.8378					15	9	2	0	0	0	0.46905	1	29778	29778		16.942	0	1	754790			5846	828	2870	2889	7210	7210					0.06752430079711758
FLPPNSGAGLL	11	Unmodified	_FLPPNSGAGLL_					0	0	0		ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	ENST00000318967.6_2_1:153700611-153701247:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3025390505791	2	543.303124	1084.5917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.187	1	62.187	61.687	62.687	0								0	0	0	0.63775	1	25926	25926		3.2813	0.39209	1				5847	5837	2871	2890	7211	7211					0.052783159944056024
FLPPPFPPP	9	Unmodified	_FLPPPFPPP_					0	0	0		ENST00000469669.5_1_22:29688055-29696148:+|nuORF;ENST00000400979.2_1_1:166244929-166246012:-|nuORF;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;ENSG00000182944|ENST00000397938|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.7818176150322	2	504.781296	1007.54804	1.8256	0.00092151	0.45022	0.00022726	2.2758	0.0011488	504.78135305008146	72.682	0.69392	72.682	72.427	73.121	0					35	21	2	0	0	0	0.11074	3	30274	30225;30274;30330		45.75	17.577	1	1160000			5848	4635	2872	2891	7212;7213;7214	7213					0.04456751287898442
FLPPPFPPP	9	Unmodified	_FLPPPFPPP_					0	0	0		ENST00000469669.5_1_22:29688055-29696148:+|nuORF;ENST00000400979.2_1_1:166244929-166246012:-|nuORF;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;ENSG00000182944|ENST00000397938|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.7824584841728	2	504.781296	1007.54804	2.2732	0.0011475	0.2509	0.00012665	2.5241	0.0012741	504.78125207730835	72.142	0.69585	72.467	72.133	72.829	0.32494					38	21	2	0	0	0	0.11074	3	30176	30126;30176;30219		45.75	17.577	1	1344100			5849	4635	2872	2891	7215;7216;7217	7216					0.04456751287898442
FLPPPFPPP	9	Unmodified	_FLPPPFPPP_					0	0	0		ENST00000469669.5_1_22:29688055-29696148:+|nuORF;ENST00000400979.2_1_1:166244929-166246012:-|nuORF;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;ENSG00000182944|ENST00000397938|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7827331423759	2	504.781296	1007.54804	2.9104	0.0014691	-0.4294	-0.00021675	2.481	0.0012524	504.78152441156396	71.055	0.694	72.397	72.054	72.748	1.3415					49	22	3	0	0	0	0.035716	1	29775	29775		79.935	23.886	1	3932800			5850	4635	2872	2891	7218	7218					0.04456751287898442
FLPPPFPPP	9	Unmodified	_FLPPPFPPP_					0	0	0		ENST00000469669.5_1_22:29688055-29696148:+|nuORF;ENST00000400979.2_1_1:166244929-166246012:-|nuORF;ENST00000479135.5_1_22:29687437-29696148:+|nuORF;nc|ENSG00000182944|Q01844-2|EWSR1;nc|ENSG00000182944|Q01844-6|EWSR1;nc|ENSG00000182944|Q01844-3|EWSR1;ENSG00000182944|ENST00000397938|EWSR1;nc|ENSG00000182944|Q01844-5|EWSR1	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	ENST00000469669.5_1_22:29688055-29696148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7833740115166	2	504.781296	1007.54804	1.3522	0.00068258	1.4426	0.00072821	2.7949	0.0014108	504.78239345094806	70.508	0.85422	72.346	71.946	72.801	1.8378					57	27	3	0	0	0	0.026036	3	29576	29527;29576;29631		93.763	37.221	1	2674300			5851	4635	2872	2891	7219;7220;7221	7220					0.04456751287898442
FLPSEHGDET	10	Unmodified	_FLPSEHGDET_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	377.7256042361259	3	377.836616	1130.48802	-0.31768	-0.00012003	-2.3415	-0.00088472	-2.6592	-0.0010047	377.835068530844	64.992	0.3152	64.992	64.881	65.197	0					15	9	2	0	0	0	0.12542	1	27132	27132		1.9064	1.1298	1	881660	+		5852	10559	2873	2892	7222	7222					-0.0720063590395057
FLPSEHGDET	10	Unmodified	_FLPSEHGDET_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	377.836616	1130.48802	1.4812	0.00055966	-2.7415	-0.0010359	-1.2603	-0.0004762	378.17003257222194	63.537	0.33236	64.95	64.753	65.085	1.4134	-0.024541	2.7379E-05	NaN	1.9064	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1796700	+		5853	10559	2873	2892							-0.0720063590395057
FLPSEHGDET	10	Unmodified	_FLPSEHGDET_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	377.836616	1130.48802	1.9699	0.00074429	-3.1775	-0.0012006	-1.2076	-0.00045628	378.17017756860025	63.037	0.33877	64.982	64.752	65.091	1.9444	0.0071537	-0.00046677	NaN	1.9064	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1608000	+		5854	10559	2873	2892							-0.0720063590395057
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.7953369021416	2	533.794601	1065.57465	2.2248	0.0011876	-0.76893	-0.00041045	1.4559	0.00077715	533.7944240059304	83.259	0.49025	83.259	83.014	83.504	0					41	15	4	0	0	0	0.069258	2	34715	34665;34715		60.39	15.983	1	6588500			5855	874	2874	2893	7223;7224	7224					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1066.582324206829	1	1066.58192	1065.57465	2.3128	0.0024668	0.17802	0.00018988	2.4908	0.0026567	1066.5813899826935	83.244	0.33582	83.244	83.076	83.412	0					22	10	3	0	0	0	0.09539	1	34707	34707		50.855	14.811	1	1864200			5856	874	2874	2893	7225	7225					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.7955200076103	2	533.794601	1065.57465	2.3441	0.0012513	-0.26971	-0.00014397	2.0744	0.0011073	533.7945590600222	82.759	0.48891	83.029	82.817	83.306	0.27029					45	15	4	0	0	0	0.09539	2	34634	34582;34634		50.855	0	1	8738300			5857	874	2874	2893	7226;7227	7227					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7955810427666	2	533.794601	1065.57465	3.7875	0.0020217	-1.5199	-0.00081134	2.2675	0.0012104	533.7938235132268	81.8	0.5266	83.019	82.765	83.292	1.2184					55	16	4	0	0	0	0.069258	4	34372	34284;34334;34372;34416		60.39	15.983	1	22130000			5858	874	2874	2893	7228;7229;7230;7231	7230					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1066.584521472454	1	1066.58192	1065.57465	4.2156	0.0044963	-0.50676	-0.0005405	3.7089	0.0039558	1066.5807108063093	81.797	0.33984	83.018	82.861	83.2	1.2204					17	10	2	0	0	0	0.083604	1	34312	34312		54.774	3.9185	1	5620100			5859	874	2874	2893	7232	7232					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7960693240166	2	533.794601	1065.57465	3.6395	0.0019428	-0.61673	-0.00032921	3.0228	0.0016136	533.7942739897711	81.333	0.55453	83.029	82.766	83.32	1.6959					54	17	4	0	0	0	0.069258	3	34164	34075;34124;34164		60.39	15.983	1	24162000			5860	874	2874	2893	7233;7234;7235	7235					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1066.586352527142	1	1066.58192	1065.57465	3.9214	0.0041825	0.54125	0.00057728	4.4626	0.0047598	1066.5819733072915	81.362	0.36592	83.058	82.829	83.195	1.6959					17	11	2	0	0	0	0.076627	2	34139	34139;34193		57.471	6.6163	1	6949400			5861	874	2874	2893	7236;7237	7236					0.044483953885674055
FLPSYIIDV	9	Unmodified	_FLPSYIIDV_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion;ENST00000532560.5_1_8:145625727-145626379:-|nuORF	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1066.58192	1065.57465	2.9205	0.0031149	1.9833	0.0021154	4.9038	0.0052303	1066.5838634510228	82.715	0.30482	82.985	82.847	83.152	0.27029	-0.090764	0.0017213	NaN	57.471	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2276600			5862	874	2874	2893							0.044483953885674055
FLPVCLRDF	9	Unmodified	_FLPVCLRDF_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2937499880791	2	555.294245	1108.57394	1.0535	0.00058501	2.3679	0.0013149	3.4214	0.0018999	555.2954896125073	58.543	0.37911	59.961	59.752	60.132	1.4181					29	11	3	0	0	0	0.22519	1	24515	24515		30.225	3.3412	1	3805900	+		5863	10448	2875	2894	7238	7238					0.023992774678617934
FLPVCLRDF	9	Unmodified	_FLPVCLRDF_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	555.294245	1108.57394	2.3094	0.0012824	5.1557	0.0028629	7.4651	0.0041453	555.2970850221983	59.559	0.21888	59.885	59.776	59.995	0.32553	-0.076398	0.0016494	NaN	30.225	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	854330	+		5864	10448	2875	2894							0.023992774678617934
FLQEGDLISA	10	Unmodified	_FLQEGDLISA_					0	0	0		nc|ENSG00000130713|Q13868-3|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.7833129763603	2	546.782222	1091.54989	1.5646	0.00085549	1.024	0.0005599	2.5886	0.0014154	546.7826739853897	56.94	0.31933	56.94	56.78	57.099	0					17	10	2	0	0	0	0.40874	1	23765	23765		32.786	10.049	1	1514400			5865	2452	2876	2895	7239	7239					0.007777155151870829
FLQEGDLISA	10	Unmodified	_FLQEGDLISA_					0	0	0		nc|ENSG00000130713|Q13868-3|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.7846557497978	2	546.782222	1091.54989	2.22	0.0012138	1.6031	0.00087654	3.823	0.0020904	546.783048387405	56.626	0.26475	56.947	56.816	57.08	0.32103					14	8	2	0	0	0	0.40874	1	23748	23748		32.786	10.049	1	2008500			5866	2452	2876	2895	7240	7240					0.007777155151870829
FLQEGDLISA	10	Unmodified	_FLQEGDLISA_					0	0	0		nc|ENSG00000130713|Q13868-3|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7824584841728	2	546.782222	1091.54989	0.86267	0.00047169	-2.5698	-0.0014051	-1.7071	-0.00093341	546.7817851541265	55.532	0.24865	56.942	56.793	57.041	1.4099					11	8	2	0	0	0	0.24244	1	23263	23263		43.772	5.7984	1	3268800			5867	2452	2876	2895	7241	7241					0.007777155151870829
FLQEGDLISA	10	Unmodified	_FLQEGDLISA_					0	0	0		nc|ENSG00000130713|Q13868-3|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7834960818291	2	546.782222	1091.54989	0.28745	0.00015717	-0.28947	-0.00015828	-0.002019	-1.1039E-06	546.7825390976233	55.093	0.26627	57.062	56.9	57.166	1.9684					12	9	2	0	0	0	0.31869	1	23078	23078		38.176	6.9072	1	4141900			5868	2452	2876	2895	7242	7242					0.007777155151870829
FLQEQLVEL	9	Unmodified	_FLQEQLVEL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.8096801638603	2	559.808239	1117.60193	1.1684	0.0006541	2.2528	0.0012612	3.4213	0.0019153	559.8090498318112	71.457	0.31581	71.457	71.257	71.573	0					26	9	3	0	0	0	0.17276	2	29776	29731;29776		36.127	16.87	1	1693500			5869	3088	2877	2896	7243;7244	7244					0.047828789289496854
FLQEQLVEL	9	Unmodified	_FLQEQLVEL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8110229372978	2	559.808239	1117.60193	2.6597	0.0014889	1.4314	0.00080131	4.0911	0.0022902	559.8089297524359	69.841	0.37592	71.194	70.99	71.366	1.3536					32	11	4	0	0	0	0.040497	2	29281	29281;29337		75.761	13.188	1	5999900			5870	3088	2877	2896	7245;7246	7245					0.047828789289496854
FLQEQLVEL	9	Unmodified	_FLQEQLVEL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8106567263603	2	559.808239	1117.60193	1.914	0.0010715	1.5837	0.00088656	3.4977	0.001958	559.808869408291	69.33	0.41054	71.183	70.977	71.387	1.853					32	12	3	0	0	0	0.040497	2	29072	29072;29124		75.761	13.188	1	5502200			5871	3088	2877	2896	7247;7248	7247					0.047828789289496854
FLQEVHSL	8	Unmodified	_FLQEVHSL_					0	0	0		ENST00000321250.12_1_8:29965226-29965448:+|nuORF	ENST00000321250.12_1_8:29965226-29965448:+|nuORF	ENST00000321250.12_1_8:29965226-29965448:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7630798220634	2	486.761092	971.507631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.996	1	48.972	48.472	49.472	1.976								0	0	0	1.0178	1	19684	19684		28.487	0	1				5872	5846	2878	2897	7249	7249					0.02073784897470432
FLQKGDKVAFI	11	Unmodified	_FLQKGDKVAFI_					0	0	0		tr|A0A553SFW2|A0A553SFW2_NIACILD-carboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09600PE=3SV=1	tr|A0A553SFW2|A0A553SFW2_NIACILD-carboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09600PE=3SV=1	tr|A0A553SFW2|A0A553SFW2_NIACILD-carboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09600PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3704711794853	2	633.366256	1264.71796	3.3214	0.0021037	1.6232	0.0010281	4.9446	0.0031317	633.367971207	81.727	0.86839	82.961	82.595	83.463	1.2332					53	27	3	0	0	0	0.91768	1	34318	34318		8.7454	3.0136	1	1717800			5873	16081	2879	2898	7250	7250					0.0961882249964674
FLQLKLVV	8	Unmodified	_FLQLKLVV_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF;nc|ENSG00000149600|Q86VX2-2|COMMD7;ENSG00000149600|ENST00000278980|COMMD7	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.3186218142509	2	480.318046	958.621539	2.4965	0.0011991	-0.58666	-0.00028178	1.9098	0.00091731	480.3175895263404	71.636	0.34966	71.959	71.751	72.101	0.32359					18	10	2	0	0	0	0.80415	1	29960	29960		20.871	1.4322	1	1213300			5874	7577	2880	2899	7251	7251					0.14057299730359318
FLQPELVKL	9	Unmodified	_FLQPELVKL_					0	0	0		ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.8326293826103	2	543.831517	1085.64848	1.9787	0.0010761	0.69105	0.00037582	2.6698	0.0014519	543.8318508024946	61.883	0.37823	61.883	61.677	62.055	0					33	11	4	0	0	0	0.043696	3	25802	25756;25802;25841		72.968	19.135	1	11487000			5875	837	2881	2900	7252;7253;7254	7253					0.10908363550902322
FLQPELVKL	9	Unmodified	_FLQPELVKL_					0	0	0		ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8328124880791	2	543.831517	1085.64848	2.0752	0.0011286	0.818	0.00044485	2.8932	0.0015734	543.8318414505829	61.26	0.43571	61.589	61.36	61.796	0.32974					35	13	4	0	0	0	0.037098	3	25658	25609;25658;25696		78.728	26.46	1	10693000			5876	837	2881	2900	7255;7256;7257	7256					0.10908363550902322
FLQPELVKL	9	Unmodified	_FLQPELVKL_					0	0	0		ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8321411013603	2	543.831517	1085.64848	2.4489	0.0013318	-0.73232	-0.00039826	1.7166	0.00093354	543.831013319963	60.043	0.48205	61.463	61.236	61.718	1.4196					44	15	4	0	0	0	0.039278	3	25170	25130;25170;25225		76.825	24.556	1	29523000			5877	837	2881	2900	7258;7259;7260	7259					0.10908363550902322
FLQPELVKL	9	Unmodified	_FLQPELVKL_					0	0	0		ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8342162966728	2	543.831517	1085.64848	2.8048	0.0015253	-1.0528	-0.00057257	1.752	0.00095277	543.8308981662639	59.528	0.38488	61.497	61.286	61.671	1.969					38	12	4	0	0	0	0.057024	3	24925	24925;24973;25027		65.235	20.102	1	30744000			5878	837	2881	2900	7261;7262;7263	7261					0.10908363550902322
FLQVAPLSV	9	Unmodified	_FLQVAPLSV_					0	0	0		ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	ENSG00000125848|ENST00000341420|FLRT3	MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2912780642509	2	487.289485	972.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.225	1	80.225	79.725	80.725	0								0	0	0	0.42693	1	33407	33407		1.8442	0	1				5879	2284	2882	2901	7264	7264					0.0770383245398989
FLRFKKGKRC	10	Unmodified	_FLRFKKGKRC_					0	0	0		nc|ENSG00000182022|Q7LFX5-2|CHST15;ENSG00000182022|ENST00000435907|CHST15	nc|ENSG00000182022|Q7LFX5-2|CHST15	nc|ENSG00000182022|Q7LFX5-2|CHST15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8840209841728	2	641.881884	1281.74922	2.3142	0.0014855	-0.11138	-7.1495E-05	2.2029	0.001414	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	0.89803	1	33833	33833		1.6526	0.17072	1	10103000			5880	4592	2883	2902	7265	7265					0.11961117052783266
FLRHTLKRFLN	11	Unmodified	_FLRHTLKRFLN_					0	0	0			REV__ENSG00000099937|ENST00000215727|SERPIND1	REV__ENSG00000099937|ENST00000215727|SERPIND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	723.4365112185478	2	722.93042	1443.84629	1.3945	0.0010081	2.3439	0.0016945	3.7384	0.0027026	723.4341605267174	100.11	0.12716	100.11	100.04	100.16	0					9	3	3	0	0	0	1.0174	1	41922	41922		2.7352	1.4057	1	1474600	+		5881	8958	2884	2903	7266	7266					0.1421180253341845
FLRIIHVLRKR	11	Unmodified	_FLRIIHVLRKR_					0	0	0		L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|208|3|anti-sense	L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|208|3|anti-sense	L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|208|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2533141970634	4	363.492491	1449.94086	1.469	0.00053396	0.25659	9.3269E-05	1.7256	0.00062723	363.4929131225734	46.611	0.14458	48.582	48.472	48.617	1.9703					6	4	2	0	0	0	0.14606	1	19538	19538		0.094841	0.094841	1	310120			5882	7685	2885	2904	7267	7267					0.23388361075376451
FLRMKWLL	8	Unmodified	_FLRMKWLL_					0	0	0			REV__ENST00000484153.1_1_1:11826815-11837330:+|nuORF	REV__ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8315307497978	2	553.830798	1105.64704	2.0306	0.0011246	-0.9196	-0.00050931	1.111	0.00061531	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.88409	1	29906	29906		6.3541	0	1	7375800	+		5883	11868	2886	2905	7268	7268					0.09844450981154296
FLRQACKLK	9	Unmodified	_FLRQACKLK_					0	0	0		ENST00000261254.7_1_12:4410147-4410483:+|nuORF	ENST00000261254.7_1_12:4410147-4410483:+|nuORF	ENST00000261254.7_1_12:4410147-4410483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8246948122978	2	553.828786	1105.64302	1.1393	0.00063097	1.9208	0.0010638	3.0601	0.0016948	553.8296328426109	70.359	1.9249	70.359	69.047	70.972	0					100	61	3	0	0	0	0.76456	1	29521	29521		4.756	1.8668	1	1989600			5884	5620	2887	2906	7269	7269					0.09442361487413109
FLRQACKLK	9	Unmodified	_FLRQACKLK_					0	0	0		ENST00000261254.7_1_12:4410147-4410483:+|nuORF	ENST00000261254.7_1_12:4410147-4410483:+|nuORF	ENST00000261254.7_1_12:4410147-4410483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8290283083916	2	553.828786	1105.64302	1.2808	0.00070934	2.4382	0.0013503	3.7189	0.0020597	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.76456	1	29399	29399		4.756	0	1	2160700			5885	5620	2887	2906	7270	7270					0.09442361487413109
FLRQAIKIRRR	11	Unmodified	_FLRQAIKIRRR_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D;UNC13D|p.W260Cfs*68|1|0.11|ENSG00000092929|chr17:75840303-75840303|C/-|frameshift_variant;nc|ENSG00000092929|Q70J99-2|UNC13D;ENST00000591563.5_1_17:73836050-73840487:-|nuORF	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3168517947197	3	486.316033	1455.92627	3.2303	0.001571	-0.91815	-0.00044651	2.3122	0.0011245	486.31518681100084	105.77	0.14637	105.93	105.87	106.02	0.15859					17	7	3	0	0	0	1.0395	1	45129	45129		0.08335	0	1	59980000			5886	1168	2888	2907	7271	7271					0.2165428892719774
FLRQVLEAL	9	Unmodified	_FLRQVLEAL_					0	0	0			REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8275024294853	2	544.826766	1087.63898	2.2029	0.0012002	-3.6465	-0.0019867	-1.4436	-0.00078654	544.8244235386221	82.407	0.30675	82.687	82.52	82.827	0.2802					20	9	3	0	0	0	0.68551	1	34480	34480		7.9102	0	1	1229600	+		5887	14594	2889	2908	7272	7272					0.09866595265361866
FLRRERRRRRR	11	Unmodified	_FLRRERRRRRR_					0	0	0			REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	REV__ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	829.0142089724541	2	829.014538	1656.01452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.457	1	95.859	95.359	96.359	0.40208								0	0	0	0.63775	1	40163	40163		0	0	1		+		5888	12158	2890	2909	7273	7273					0.21275722290397425
FLRSRDRSH	9	Unmodified	_FLRSRDRSH_					0	0	0		nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A;ENST00000568515.1_1_15:66007788-66048788:-|nuORF	nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000174485|Q7Z401|DENND4A	MSMS	GG20161007_CRH_Patient100_A02_02	2	587.3184081912041	2	587.31542	1172.61629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.655	1	70.979	70.479	71.479	0.32359								0	0	0	0.42693	1	29577	29577		1.8442	0.19162	1				5889	4333	2891	2910	7274	7274					0.036883889204545994
FLSDQKLISF	10	Unmodified	_FLSDQKLISF_					0	0	0		ENSG00000169484|ENST00000641793|OR4K14	ENSG00000169484|ENST00000641793|OR4K14	ENSG00000169484|ENST00000641793|OR4K14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	599.7745239138603	2	599.329339	1196.64412	3.0027	0.0017996	-1.8701	-0.0011208	1.1326	0.0006788	599.3284837114097	63.051	0.31179	64.465	64.284	64.596	1.4134					15	9	2	0	0	0	0.12461	1	26404	26404		14.838	2.3067	1	1423500			5890	4093	2892	2911	7275	7275					0.05366854337330551
FLSEHPNVTL	10	Unmodified	_FLSEHPNVTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;APOBEC3B|p.R133Sfs*5|1|0.1|ENSG00000179750|chr22:38986035-38986038|GGGC/-|frameshift_variant	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.8057739138603	2	578.803488	1155.59242	1.7568	0.0010168	1.0832	0.00062696	2.84	0.0016438	578.8041432086438	43.343	0.34457	43.343	43.179	43.523	0					25	10	4	0	0	0	0.52861	1	18119	18119		26.268	9.3258	1	1848500			5891	4524	2893	2912	7276	7276					0.020851106434292888
FLSEHPNVTL	10	Unmodified	_FLSEHPNVTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;APOBEC3B|p.R133Sfs*5|1|0.1|ENSG00000179750|chr22:38986035-38986038|GGGC/-|frameshift_variant	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.8026000857353	2	578.803488	1155.59242	1.6716	0.00096752	-1.6396	-0.00094901	0.031988	1.8515E-05	578.8025452242898	42.851	0.22028	43.172	43.036	43.256	0.32058					18	7	3	0	0	0	0.24073	2	17978	17978;18023		43.982	26.869	1	2583500			5892	4524	2893	2912	7277;7278	7277					0.020851106434292888
FLSEHPNVTL	10	Unmodified	_FLSEHPNVTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;APOBEC3B|p.R133Sfs*5|1|0.1|ENSG00000179750|chr22:38986035-38986038|GGGC/-|frameshift_variant	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.8105346560478	2	578.803488	1155.59242	2.0562	0.0011901	4.1619	0.0024089	6.218	0.003599	578.806098774773	40.797	0.34818	42.69	42.484	42.832	1.8927					28	10	4	0	0	0	0.06111	3	17068	17068;17117;17154		100.09	45.317	1	7146300			5893	4524	2893	2912	7279;7280;7281	7279					0.020851106434292888
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.7938110232353	2	539.792589	1077.57063	1.7017	0.00091856	0.50019	0.00027	2.2019	0.0011886	539.7927805286247	65.057	0.66505	65.057	64.784	65.449	0					58	20	5	0	0	0	0.0054014	4	27077	27032;27077;27114;27153		120.45	61.772	1	39685000			5894	5337	2894	2913	7282;7283;7284;7285	7283					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1078.581103503704	1	1078.5779	1077.57063	1.9301	0.0020817	-0.56944	-0.00061419	1.3606	0.0014676	1078.5775154907274	65.024	0.31741	65.024	64.849	65.166	0					23	9	3	0	0	0	0.019432	2	27133	27085;27133		99.799	35.339	1	2325700			5895	5337	2894	2913	7286;7287	7287					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7937499880791	2	539.792589	1077.57063	1.9438	0.0010493	0.36097	0.00019485	2.3048	0.0012441	539.792786264258	64.635	0.73092	64.962	64.689	65.42	0.32689					63	22	5	0	0	0	0.0092758	3	27062	27013;27062;27112		108	53.815	1	39083000			5896	5337	2894	2913	7288;7289;7290	7289					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1078.578906238079	1	1078.5779	1077.57063	2.663	0.0028723	-0.39996	-0.00043139	2.2631	0.0024409	1078.5778732639044	64.632	0.37788	64.959	64.753	65.131	0.32689					26	11	3	0	0	0	0.0022704	2	27092	27040;27092		129.77	61.331	1	2912200			5897	5337	2894	2913	7291;7292	7292					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7939941287041	2	539.792589	1077.57063	2.4001	0.0012956	-1.5793	-0.00085249	0.82084	0.00044308	539.7916429204602	63.549	0.74808	64.962	64.659	65.407	1.4134					110	23	6	0	0	0	0.0054014	4	26638	26589;26638;26690;26771		120.45	65.677	1	97235000			5898	5337	2894	2913	7293;7294;7295;7296	7294					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1078.580249011517	1	1078.5779	1077.57063	2.4185	0.0026085	-0.39059	-0.00042128	2.0279	0.0021872	1078.5770913457	63.532	0.48877	64.946	64.691	65.18	1.4134					35	15	4	0	0	0	4.34E-05	2	26655	26609;26655		155.03	62.373	1	9437600			5899	5337	2894	2913	7297;7298	7298					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7940551638603	2	539.792589	1077.57063	2.3479	0.0012674	-1.7576	-0.00094872	0.59035	0.00031867	539.7914655792814	63.01	0.8155	64.955	64.658	65.473	1.9444					104	25	6	0	0	0	0.018723	4	26415	26369;26415;26466;26505		100.37	50.438	1	78248000			5900	5337	2894	2913	7299;7300;7301;7302	7300					0.03494305894855643
FLSELTQQL	9	Unmodified	_FLSELTQQL_					0	0	0		ENST00000465752.1_1_22:24236661-24237189:+|nuORF;ENSG00000240972|ENST00000215754|MIF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	ENST00000465752.1_1_22:24236661-24237189:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1078.580249011517	1	1078.5779	1077.57063	2.5424	0.0027421	-0.63501	-0.00068491	1.9073	0.0020572	1078.5770036504418	63.037	0.40024	64.981	64.752	65.152	1.9444					34	12	4	0	0	0	3.8363E-05	3	26455	26409;26455;26501		157.8	57.341	1	7656100			5901	5337	2894	2913	7303;7304;7305	7304					0.03494305894855643
FLSFFFPLILT	11	Unmodified	_FLSFFFPLILT_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.8867675662041	2	672.88375	1343.75295	2.2198	0.0014937	0.93996	0.00063248	3.1597	0.0021261	672.8844816043783	59.972	0.31858	60.3	60.123	60.442	0.32809					24	10	3	0	0	0	0.20118	1	25169	25169		39.95	5.548	1	1707700			5902	5082	2895	2914	7306	7306					0.09482065307611265
FLSGSREPHNL	11	Unmodified	_FLSGSREPHNL_					0	0	0			REV__ENST00000567806.1_1_16:27471942-27472230:-|nuORF	REV__ENST00000567806.1_1_16:27471942-27472230:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	628.8216430544853	2	628.822744	1255.63093	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.07	1	65.477	64.977	65.977	1.4071								0	0	0	0.63766	1	26868	26868		17.113	2.2746	1		+		5903	13945	2896	2915	7307	7307					0.01334416277973105
FLSLFQALF	9	Unmodified	_FLSLFQALF_					0	0	0		ENST00000574671.5_1_17:79478712-79478850:-|nuORF	ENST00000574671.5_1_17:79478712-79478850:-|nuORF	ENST00000574671.5_1_17:79478712-79478850:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8054077029228	2	543.305136	1084.59572	2.361	0.0012828	-1.9017	-0.0010332	0.45932	0.00024955	543.8037277871715	62.929	0.30871	64.874	64.688	64.997	1.9444					19	9	3	0	0	0	0.34572	1	26386	26386		23.148	2.6948	1	1096700			5904	7405	2897	2916	7308	7308					0.05680405488078577
FLSSVIQNL	9	Unmodified	_FLSSVIQNL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7898437380791	2	510.78985	1019.56515	1.9144	0.00097783	-0.36475	-0.00018631	1.5496	0.00079152	510.7895573265819	72.001	0.34547	72.001	71.796	72.142	0					24	10	3	0	0	0	0.11478	1	30005	30005		44.407	19.008	1	1730900			5905	4297	2898	2917	7309	7309					0.056146271030456774
FLSSVIQNL	9	Unmodified	_FLSSVIQNL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.7903625369072	2	510.78985	1019.56515	1.7746	0.00090643	0.14755	7.5366E-05	1.9221	0.0009818	510.78979955415446	71.434	0.35414	71.757	71.59	71.944	0.32359					23	10	3	0	0	0	0.22519	2	29881	29881;29935		30.225	6.5389	1	2019700			5906	4297	2898	2917	7310;7311	7310					0.056146271030456774
FLSSVIQNL	9	Unmodified	_FLSSVIQNL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7906066775322	2	510.78985	1019.56515	3.2658	0.0016682	-0.36724	-0.00018758	2.8986	0.0014806	510.7894941156962	70.364	0.51118	71.717	71.491	72.002	1.3536					29	15	3	0	0	0	0.033794	2	29503	29503;29553		81.613	24.279	1	3800700			5907	4297	2898	2917	7312;7313	7312					0.056146271030456774
FLSSVIQNL	9	Unmodified	_FLSSVIQNL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7899352908134	2	510.78985	1019.56515	3.1636	0.0016159	-1.0844	-0.00055389	2.0792	0.001062	510.78899362824376	69.862	0.54144	71.7	71.5	72.041	1.8378					30	16	3	0	0	0	0.028763	2	29333	29281;29333		89.427	25.19	1	3891600			5908	4297	2898	2917	7314;7315	7315					0.056146271030456774
FLSTINVGL	9	Unmodified	_FLSTINVGL_					0	0	0		ENSG00000140350|ENST00000465139|ANP32A;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	963.5511352419853	1	963.550959	962.543683	1.6105	0.0015518	2.037	0.0019628	3.6476	0.0035146	963.553174886376	71.557	0.22171	71.557	71.415	71.636	0					9	6	2	0	0	0	0.51189	1	29796	29796		14.838	4.0143	1	533180			5909	2909	2899	2918	7316	7316					0.06091242074330694
FLSTINVGL	9	Unmodified	_FLSTINVGL_					0	0	0		ENSG00000140350|ENST00000465139|ANP32A;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	963.5510131716728	1	963.550959	962.543683	2.0526	0.0019778	1.2467	0.0012013	3.2993	0.0031791	963.5528876740041	69.414	0.21987	71.267	71.136	71.356	1.853					11	6	2	0	0	0	0.042029	1	29113	29113		74.423	38.379	1	991920			5910	2909	2899	2918	7317	7317					0.06091242074330694
FLSTINVGL	9	Unmodified	_FLSTINVGL_					0	0	0		ENSG00000140350|ENST00000465139|ANP32A;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	963.550959	962.543683	2.0987	0.0020222	0.068218	6.5731E-05	2.1669	0.0020879	963.5510169962213	69.884	0.25052	71.238	71.116	71.366	1.3536	-0.1162	-0.00095253	NaN	74.423	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1522800			5911	2909	2899	2918							0.06091242074330694
FLTEFINYI	9	Unmodified	_FLTEFINYI_					0	0	0		ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1;ENST00000470203.1_1_20:3171462-3175942:-|nuORF	ENSG00000198171|ENST00000354488|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	580.3029052615166	2	580.305332	1158.59611	1.8009	0.0010451	-0.35054	-0.00020342	1.4503	0.00084164	580.3049893485356	94.169	0.37442	94.169	93.963	94.337	0					24	11	3	0	0	0	0.20838	2	39337	39337;39390		32.117	22.043	1	1180900			5912	5044	2900	2919	7318;7319	7318					0.023157804172797114
FLTEFINYI	9	Unmodified	_FLTEFINYI_					0	0	0		ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1;ENST00000470203.1_1_20:3171462-3175942:-|nuORF	ENSG00000198171|ENST00000354488|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.3047973513603	2	580.305332	1158.59611	2.568	0.0014902	-0.56797	-0.00032959	2.0001	0.0011606	580.3046089518051	93.781	0.35028	93.926	93.718	94.068	0.14493					23	10	3	0	0	0	0.15478	1	39240	39240		38.151	21.209	1	908880			5913	5044	2900	2919	7320	7320					0.023157804172797114
FLTEFINYI	9	Unmodified	_FLTEFINYI_					0	0	0		ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1;ENST00000470203.1_1_20:3171462-3175942:-|nuORF	ENSG00000198171|ENST00000354488|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3072997927666	2	580.305332	1158.59611	4.069	0.0023613	0.020613	1.1962E-05	4.0896	0.0023732	580.3051786085774	92.946	0.36079	93.817	93.637	93.998	0.87176					25	10	3	0	0	0	0.10722	2	39158	39111;39158		46.921	26.467	1	2676000			5914	5044	2900	2919	7321;7322	7322					0.023157804172797114
FLTEFINYI	9	Unmodified	_FLTEFINYI_					0	0	0		ENSG00000198171|ENST00000354488|DDRGK1;nc|ENSG00000198171|Q96HY6-2|DDRGK1;ENST00000470203.1_1_20:3171462-3175942:-|nuORF	ENSG00000198171|ENST00000354488|DDRGK1	ENSG00000198171|ENST00000354488|DDRGK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3081542849541	2	580.305332	1158.59611	3.223	0.0018703	0.77262	0.00044836	3.9956	0.0023187	580.3051066820082	92.519	0.32426	93.846	93.666	93.991	1.3269					21	9	3	0	0	0	0.10722	1	38938	38938		46.921	21.522	1	1749800			5915	5044	2900	2919	7323	7323					0.023157804172797114
FLTEHRDGF	9	Unmodified	_FLTEHRDGF_					0	0	0		ENSG00000147155|ENST00000495186|EBP	ENSG00000147155|ENST00000495186|EBP	ENSG00000147155|ENST00000495186|EBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2724487185478	2	561.272355	1120.53016	0.79187	0.00044445	2.7889	0.0015654	3.5808	0.0020098	561.273480305671	51.048	0.30257	52.442	52.287	52.589	1.3938					18	9	3	0	0	0	0.51189	1	21415	21415		14.838	3.198	1	1801800			5916	3173	2901	2920	7324	7324					-0.02528615704909498
FLTGVTTEL	9	Unmodified	_FLTGVTTEL_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	980.5361205935478	1	980.529889	979.522613	2.2596	0.0022156	-0.058189	-5.7056E-05	2.2014	0.0021586	980.5302070999057	60.595	0.25246	60.923	60.792	61.044	0.32809					11	7	2	0	0	0	0.083604	1	25392	25392		54.774	20.586	1	504100			5917	4465	2902	2921	7325	7325					0.032032319747941074
FLTGVTTEL	9	Unmodified	_FLTGVTTEL_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	980.5331298708916	1	980.529889	979.522613	3.0011	0.0029427	-1.1067	-0.0010851	1.8944	0.0018576	980.5282195546126	59.428	0.34216	60.848	60.678	61.02	1.4196					18	10	2	0	0	0	0.09539	1	24942	24942		50.855	16.753	1	1262200			5918	4465	2902	2921	7326	7326					0.032032319747941074
FLTGVTTEL	9	Unmodified	_FLTGVTTEL_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	980.5344116091728	1	980.529889	979.522613	2.5191	0.0024701	-0.55341	-0.00054263	1.9657	0.0019274	980.5305203715943	58.966	0.37558	60.935	60.723	61.099	1.969					17	11	2	0	0	0	0.10294	1	24730	24730		48.346	4.4876	1	883010			5919	4465	2902	2921	7327	7327					0.032032319747941074
FLTKQEILL	9	Unmodified	_FLTKQEILL_					0	0	0		nc|ENSG00000185043|Q99828-2|CIB1;ENSG00000185043|ENST00000328649|CIB1;chr15:90231213-90233669|195|14.63|0.67|4.44|-|1|CIB1,CIB1|1	nc|ENSG00000185043|Q99828-2|CIB1	nc|ENSG00000185043|Q99828-2|CIB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8381835818291	2	552.8368	1103.65905	1.4821	0.00081936	-0.73058	-0.00040389	0.75153	0.00041547	552.8366245114172	55.022	0.26973	55.022	54.823	55.093	0					21	10	3	0	0	0	0.099302	2	22908	22908;22948		49.554	9.3707	1	2429100			5920	4730	2903	2922	7328;7329	7328					0.1113634620535322
FLTTTVLLIF	10	Unmodified	_FLTTTVLLIF_					0	0	0			REV__ENSG00000277556|ENST00000374779|OR13C5	REV__ENSG00000277556|ENST00000374779|OR13C5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3570434451103	2	584.354825	1166.6951	2.8591	0.0016707	2.8418	0.0016606	5.701	0.0033314	584.3564830012283	74.225	0.87592	76.021	75.869	76.745	1.7962					48	27	3	0	0	0	0.87343	1	31196	31196		4.3292	0	1	1865600	+		5921	12022	2904	2923	7330	7330					0.1184180338218539
FLVEHNLVL	9	Unmodified	_FLVEHNLVL_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3150512576103	2	542.313492	1082.61243	1.7813	0.00096604	1.8445	0.0010003	3.6258	0.0019663	542.3144994480923	58.64	0.32328	58.64	58.46	58.784	0					16	9	2	0	0	0	0.18809	2	24477	24428;24477		34.402	5.9627	1	2789900			5922	1927	2905	2924	7331;7332	7332					0.07442906374035374
FLVEHNLVL	9	Unmodified	_FLVEHNLVL_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3153564333916	2	542.313492	1082.61243	2.4275	0.0013164	0.77419	0.00041986	3.2017	0.0017363	542.3137603802221	58.107	0.3208	58.43	58.236	58.556	0.32298					17	9	2	0	0	0	0.098163	1	24368	24368		49.933	17.147	1	1907100			5923	1927	2905	2924	7333	7333					0.07442906374035374
FLVEHNLVL	9	Unmodified	_FLVEHNLVL_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3151122927666	2	542.313492	1082.61243	1.937	0.0010505	1.4298	0.00077539	3.3668	0.0018259	542.3138437280721	56.899	0.33865	58.313	58.123	58.462	1.4145					22	10	3	0	0	0	0.031377	2	23853	23803;23853		85.272	29.095	1	8234700			5924	1927	2905	2924	7334;7335	7335					0.07442906374035374
FLVEHNLVL	9	Unmodified	_FLVEHNLVL_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3143188357353	2	542.313492	1082.61243	1.1439	0.00062036	1.8728	0.0010156	3.0167	0.001636	542.3142979252349	56.296	0.30728	58.265	58.087	58.394	1.9684					24	9	3	0	0	0	0.037761	2	23627	23577;23627		78.149	20.124	1	7356400			5925	1927	2905	2924	7336;7337	7337					0.07442906374035374
FLVFHESSI	9	Unmodified	_FLVFHESSI_					0	0	0			REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.7834350466728	2	539.782025	1077.5495	1.9336	0.0010437	1.0224	0.00055187	2.956	0.0015956	539.7830731703397	60.036	0.26852	60.036	59.856	60.124	0					14	8	2	0	0	0	0.1735	1	25022	25022		36.044	0	1	1211900	+		5926	13970	2906	2925	7338	7338					0.013823405859966442
FLVFHESSI	9	Unmodified	_FLVFHESSI_					0	0	0			REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7831298708916	2	539.782025	1077.5495	2.4196	0.0013061	-0.054338	-2.9331E-05	2.3653	0.0012767	539.781995431163	59.402	0.26439	59.728	59.604	59.869	0.32553					15	8	2	0	0	0	0.1735	1	24890	24890		36.044	5.8194	1	2326800	+		5927	13970	2906	2925	7339	7339					0.013823405859966442
FLVFHESSI	9	Unmodified	_FLVFHESSI_					0	0	0			REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	540.2234985232353	2	539.782025	1077.5495	0.7644	0.00041261	-1.8655	-0.001007	-1.1011	-0.00059435	540.2817302538158	58.13	0.3437	59.548	59.44	59.784	1.4181					18	11	2	0	0	0	0.054363	1	24383	24383		44.407	12.102	1	3699800	+		5928	13970	2906	2925	7340	7340					0.013823405859966442
FLVFHESSI	9	Unmodified	_FLVFHESSI_					0	0	0			REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7820922732353	2	539.782025	1077.5495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.594	1	59.563	59.063	60.063	1.9684								0	0	0	0.049731	1	24158	24158		60.39	6.814	1		+		5929	13970	2906	2925	7341	7341					0.013823405859966442
FLVKNAGA	8	Unmodified	_FLVKNAGA_					0	0	0			REV__PRSS16|p.P434A|1|0.31|ENSG00000112812|chr6:27254842-27254842|C/G|missense_variant	REV__PRSS16|p.P434A|1|0.31|ENSG00000112812|chr6:27254842-27254842|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2391235232353	2	410.239796	818.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.612	1	29.387	28.887	29.887	1.7754								0	0	0	1.0178	1	11557	11557		9.3474	0	1		+		5930	14605	2907	2926	7342	7342					0.04854434559888432
FLVKRFKW	8	Unmodified	_FLVKRFKW_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3443481326103	2	562.342387	1122.67022	1.1505	0.00064699	1.3165	0.00074035	2.4671	0.0013873	562.3427767084524	70.133	1.1677	70.133	69.675	70.842	0					57	37	2	0	0	0	0.89176	1	29082	29082		0.79363	0.19213	1	1274100	+		5931	9516	2908	2927	7343	7343					0.11379213090117446
FLVKRFKW	8	Unmodified	_FLVKRFKW_					0	0	0			REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	REV__nc|ENSG00000118246|Q9NYY8-2|FASTKD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3439208865166	2	562.342387	1122.67022	1.2031	0.00067655	1.8112	0.0010185	3.0143	0.001695	562.3431565799003	70.004	1.3335	70.326	69.344	70.678	0.32224					80	42	3	0	0	0	0.89176	1	29229	29229		0.79363	0.19213	1	1666400	+		5932	9516	2908	2927	7344	7344					0.11379213090117446
FLVMTAKHVS	10	Unmodified	_FLVMTAKHVS_					0	0	0			REV__ENST00000609469.5_1_3:122135093-122161595:+|nuORF	REV__ENST00000609469.5_1_3:122135093-122161595:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2119323611259	3	378.21096	1131.61105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.83	1	104	103.5	104.5	0.1731								0	0	0	0.66222	1	43814	43814		0.69767	0.24315	1		+		5933	14151	2909	2928	7345	7345					0.05050949013616446
FLVSNMLLAEA	11	Unmodified	_FLVSNMLLAEA_					0	0	0		nc|ENSG00000100100|Q96FE7-5|PIK3IP1;ENSG00000100100|ENST00000215912|PIK3IP1;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3254272341728	2	604.323199	1206.63185	2.6875	0.0016241	0.7254	0.00043837	3.4129	0.0020625	604.323685498893	83.014	0.46171	84.214	83.939	84.401	1.2001					28	14	3	0	0	0	0.11083	1	34862	34862		53.833	31.097	1	1546300			5934	1241	2910	2929	7346	7346					0.03679494602647537
FLVSNMLLAEA	11	Unmodified	_FLVSNMLLAEA_					0	0	0		nc|ENSG00000100100|Q96FE7-5|PIK3IP1;ENSG00000100100|ENST00000215912|PIK3IP1;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3262817263603	2	604.323199	1206.63185	2.9687	0.0017941	1.1666	0.00070498	4.1353	0.002499	604.3237417073434	82.51	0.3081	84.18	84.017	84.326	1.67					19	9	3	0	0	0	0.1347	1	34641	34641		49.554	26.818	1	1478900			5935	1241	2910	2929	7347	7347					0.03679494602647537
FLVSNMLLAEA	11	Unmodified	_FLVSNMLLAEA_					0	0	0		nc|ENSG00000100100|Q96FE7-5|PIK3IP1;ENSG00000100100|ENST00000215912|PIK3IP1;nc|ENSG00000100100|Q96FE7-4|PIK3IP1;nc|ENSG00000100100|Q96FE7-2|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	604.323199	1206.63185	2.7398	0.0016557	1.1585	0.00070013	3.8983	0.0023558	604.3241225031558	84.396	0.15533	84.396	84.306	84.461	0	0.13223	0.00024599	NaN	53.833	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	293540			5936	1241	2910	2929							0.03679494602647537
FLWDEGFHQL	10	Unmodified	_FLWDEGFHQL_					0	0	0		ENST00000462189.1_1_2:74688404-74690534:-|nuORF;nc|ENSG00000115275|Q13724-2|MOGS;MOGS|p.P775Lfs*21|1|0.12|ENSG00000115275|chr2:74461466-74461467|-/CAAATCTGGCAAAAGCAATAGAGTTCAA|frameshift_variant;ENSG00000115275|ENST00000448666|MOGS	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	646.3125488162041	2	646.308938	1290.60332	2.0078	0.0012976	0.31278	0.00020215	2.3205	0.0014998	646.309164830004	72.761	0.34535	72.761	72.588	72.933	0					26	10	3	0	0	0	0.23739	2	30261	30261;30327		51.63	38.587	1	1945300			5937	1909	2911	2930	7348;7349	7348					-0.030354869822986075
FLWDEGFHQL	10	Unmodified	_FLWDEGFHQL_					0	0	0		ENST00000462189.1_1_2:74688404-74690534:-|nuORF;nc|ENSG00000115275|Q13724-2|MOGS;MOGS|p.P775Lfs*21|1|0.12|ENSG00000115275|chr2:74461466-74461467|-/CAAATCTGGCAAAAGCAATAGAGTTCAA|frameshift_variant;ENSG00000115275|ENST00000448666|MOGS	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	646.3100463747978	2	646.308938	1290.60332	1.7963	0.001161	1.2701	0.00082085	3.0664	0.0019818	646.3094737041274	72.237	0.3812	72.562	72.355	72.737	0.32494					29	11	4	0	0	0	0.14924	2	30196	30196;30239		72.968	50.232	1	2394500			5938	1909	2911	2930	7350;7351	7350					-0.030354869822986075
FLWDKRTGL	9	Unmodified	_FLWDKRTGL_					0	0	0		ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2130004763603	3	379.213469	1134.61858	1.5616	0.0005922	-0.28893	-0.00010957	1.2727	0.00048263	379.2129556673893	42.741	0.27292	44.662	44.478	44.751	1.9211					18	8	3	0	0	0	0.50272	1	17888	17888		14.957	5.574	1	1623500			5939	6789	2912	2931	7352	7352					0.056654246055586555
FLWDKRTGL	9	Unmodified	_FLWDKRTGL_					0	0	0		ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3162109255791	2	568.316566	1134.61858	1.8552	0.0010543	-0.61194	-0.00034777	1.2433	0.00070656	568.3160720297728	42.757	0.24161	44.678	44.509	44.751	1.9211					10	7	2	0	0	0	0.40005	1	17913	17913		20.415	3.4722	1	745960			5940	6789	2912	2931	7353	7353					0.056654246055586555
FLWDKRTGL	9	Unmodified	_FLWDKRTGL_					0	0	0		ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	ENST00000476983.5_1_1:155238132-155243105:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	568.316566	1134.61858	1.8474	0.0010499	-1.4028	-0.00079725	0.44456	0.00025265	568.3155017495513	43.368	0.17752	44.721	44.648	44.825	1.3536	0.021742	-0.00065521	NaN	20.415	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	406450			5941	6789	2912	2931							0.056654246055586555
FLWEILERL	9	Unmodified	_FLWEILERL_					0	0	0		ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	609.8483764529228	2	609.847699	1217.68084	1.8461	0.0011258	1.8205	0.0011102	3.6666	0.0022361	609.8487488402513	96.846	0.24624	96.846	96.772	97.019	0					17	7	3	0	0	0	0.033102	1	40483	40483		82.529	27.027	1	1513900			5942	5967	2913	2932	7354	7354					0.08071150953901451
FLWEILERL	9	Unmodified	_FLWEILERL_					0	0	0		ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	609.8505737185478	2	609.847699	1217.68084	2.6176	0.0015964	1.5278	0.00093175	4.1455	0.0025281	609.8488872762332	96.741	0.31538	96.846	96.755	97.07	0.105					16	9	3	0	0	0	0.02878	1	40486	40486		89.401	27.799	1	1818700			5943	5967	2913	2932	7355	7355					0.08071150953901451
FLWEILERL	9	Unmodified	_FLWEILERL_					0	0	0		ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.8511230349541	2	609.847699	1217.68084	3.7665	0.002297	1.2027	0.00073347	4.9692	0.0030305	609.848590440976	96.536	0.21082	96.821	96.774	96.985	0.28442					16	6	3	0	0	0	0.0080158	1	40624	40624		110.67	31.078	1	4515200			5944	5967	2913	2932	7356	7356					0.08071150953901451
FLWEILERL	9	Unmodified	_FLWEILERL_					0	0	0		ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	ENST00000347770.8_1_8:103852005-103852041:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	609.8479492068291	2	609.847699	1217.68084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.416	1	96.722	96.222	97.222	0.3062								0	0	0	0.00063723	1	40559	40559		103.35	30.386	1				5945	5967	2913	2932	7357	7357					0.08071150953901451
FLWKEPATM	9	Unmodified	_FLWKEPATM_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;ENST00000570116.6_1_16:89971082-89977643:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7905761599541	2	561.786253	1121.55795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.392	1	50.369	49.869	50.869	1.9772								0	0	0	0.072403	1	20270	20270		39.95	19.496	1				5946	2944	2914	2933	7358	7358					0.002035712309407245
FLWRIKPF	8	Unmodified	_FLWRIKPF_					0	0	0		nc|ENSG00000156687|Q6UXZ4-2|UNC5D;ENSG00000156687|ENST00000404895|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8308593630791	2	553.829112	1105.64367	2.0306	0.0011246	2.1236	0.0011761	4.1542	0.0023007	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.88409	1	29852	29852		6.3541	1.5981	1	7375800			5947	3456	2915	2934	7359	7359					0.09507524198784267
FLWRIKPF	8	Unmodified	_FLWRIKPF_					0	0	0		nc|ENSG00000156687|Q6UXZ4-2|UNC5D;ENSG00000156687|ENST00000404895|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8299438357353	2	553.829112	1105.64367	1.5125	0.00083768	2.4367	0.0013495	3.9492	0.0021872	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.88409	1	29629	29629		6.3541	1.5981	1	5931400			5948	3456	2915	2934	7360	7360					0.09507524198784267
FLWTHQEKQ	9	Unmodified	_FLWTHQEKQ_					0	0	0		ENST00000322313.8_1_2:128463776-128463893:-|nuORF	ENST00000322313.8_1_2:128463776-128463893:-|nuORF	ENST00000322313.8_1_2:128463776-128463893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2087280154228	3	406.208495	1215.60366	2.7808	0.0011296	-1.4549	-0.00059098	1.3259	0.0005386	406.20765889363076	90.331	0.88359	90.541	89.92	90.804	0.20904					45	27	3	0	0	0	0.80869	1	37895	37895		2.9952	0	1	3764600			5949	5854	2916	2935	7361	7361					0.004479327375747744
FLYAGHIFL	9	Unmodified	_FLYAGHIFL_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.7983886599541	2	540.797478	1079.5804	1.3953	0.00075457	0.024111	1.3039E-05	1.4194	0.00076761	540.7979385352984	69.913	0.38004	69.913	69.738	70.118	0					25	11	3	0	0	0	0.08022	1	29117	29117		56.048	34.302	1	1599500			5950	2512	2917	2936	7362	7362					0.04379538690886875
FLYAGHIFL	9	Unmodified	_FLYAGHIFL_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.7982055544853	2	540.797478	1079.5804	1.4175	0.00076657	0.16793	9.0814E-05	1.5854	0.00085739	540.797529538595	69.298	0.40746	69.62	69.407	69.815	0.32224					27	12	3	0	0	0	0.08022	1	28984	28984		56.048	32.9	1	1450400			5951	2512	2917	2936	7363	7363					0.04379538690886875
FLYAGHIFL	9	Unmodified	_FLYAGHIFL_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7993041872978	2	540.797478	1079.5804	2.1632	0.0011699	1.1318	0.00061207	3.295	0.0017819	540.7979751930492	68.067	0.46133	69.444	69.213	69.675	1.3778					33	14	3	0	0	0	0.0084224	2	28565	28513;28565		109.15	63.404	1	6875100			5952	2512	2917	2936	7364;7365	7365					0.04379538690886875
FLYAGHIFL	9	Unmodified	_FLYAGHIFL_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7993652224541	2	540.797478	1079.5804	1.5653	0.00084649	1.8069	0.00097718	3.3722	0.0018237	540.7983130344105	67.473	0.52074	69.343	69.059	69.58	1.87					37	16	3	0	0	0	0.0084224	3	28302	28258;28302;28340		109.15	53.106	1	5912300			5953	2512	2917	2936	7366;7367;7368	7367					0.04379538690886875
FLYDNLIIF	9	Unmodified	_FLYDNLIIF_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;ENST00000477229.1_1_1:20987242-20987843:-|nuORF	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3159057497978	2	579.3157	1156.61685	3.2267	0.0018693	-3.1391	-0.0018185	0.087596	5.0746E-05	579.3138926179131	97.395	0.1193	97.701	97.625	97.744	0.3062					8	3	3	0	0	0	0.059546	1	40972	40972		64.236	2.8788	1	19679000			5954	5360	2918	2937	7369	7369					0.04480370796954958
FLYGGELVL	9	Unmodified	_FLYGGELVL_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1010.558947741985	1	1010.55571	1009.54843	1.9472	0.0019678	1.5363	0.0015526	3.4836	0.0035203	1010.5577327125667	80.941	0.31076	80.941	80.76	81.07	0					16	9	2	0	0	0	0.3154	1	33722	33722		24.674	2.9272	1	908800			5955	2681	2919	2938	7370	7370					0.04404126217082194
FLYGGELVL	9	Unmodified	_FLYGGELVL_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1010.557543933392	1	1010.55571	1009.54843	2.5536	0.0025805	0.82692	0.00083565	3.3805	0.0034162	1010.5558239634397	79.46	0.40682	80.711	80.456	80.863	1.2512					17	12	2	0	0	0	0.078975	1	33328	33328		56.541	14.447	1	2451600			5956	2681	2919	2938	7371	7371					0.04404126217082194
FLYGGELVL	9	Unmodified	_FLYGGELVL_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1010.55571	1009.54843	2.1969	0.0022201	-0.96687	-0.00097708	1.23	0.001243	1010.5563051458704	80.452	0.27866	80.743	80.593	80.871	0.29055	-0.037283	-0.0016293	NaN	56.541	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718540			5957	2681	2919	2938							0.04404126217082194
FLYGGELVL	9	Unmodified	_FLYGGELVL_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1010.55571	1009.54843	2.156	0.0021787	0.77714	0.00078534	2.9331	0.0029641	1010.5565037486618	78.991	0.37113	80.726	80.506	80.877	1.735	-0.054345	0.00013312	NaN	56.541	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1761900			5958	2681	2919	2938							0.04404126217082194
FLYGLHVL	8	Unmodified	_FLYGLHVL_					0	0	0		ENSG00000135749|ENST00000258229|PCNX2;nc|ENSG00000135749|A6NKB5-4|PCNX2;nc|ENSG00000135749|A6NKB5-3|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	ENSG00000135749|ENST00000258229|PCNX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2811767458916	2	481.278921	960.543289	2.7024	0.0013006	2.9878	0.001438	5.6902	0.0027386	481.28000943754137	78.294	0.42382	79.561	79.363	79.787	1.2668					37	13	4	0	0	0	0.88958	1	32926	32926		2.8892	0	1	10383000			5959	2685	2920	2939	7372	7372					0.06143867145146942
FLYLCIFAL	9	Unmodified	_FLYLCIFAL_					0	0	0			REV__ENST00000375206.6_1_9:100008408-100053768:+|nuORF	REV__ENST00000375206.6_1_9:100008408-100053768:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.8039428591728	2	551.803914	1101.59328	3.1783	0.0017538	-2.8174	-0.0015546	0.36091	0.00019915	551.8025327486952	98.348	0.17673	98.605	98.475	98.651	0.25636					6	5	2	0	0	0	0.051525	1	41391	41391		67.413	11.365	1	5467400	+		5960	12712	2921	2940	7373	7373					0.04654233758765258
FLYPFFGVL	9	Unmodified	_FLYPFFGVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.8026000857353	2	551.802229	1101.5899	3.384	0.0018673	-2.6108	-0.0014407	0.77322	0.00042667	551.8006827752454	98.401	0.08448	98.629	98.585	98.669	0.22776					4	2	2	0	0	0	0.051525	1	41424	41424		67.413	16.558	1	12322000			5961	280	2922	2941	7374	7374					0.04317306976417967
FLYPFFGVL	9	Unmodified	_FLYPFFGVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	551.802229	1101.5899	3.1783	0.0017538	0.23697	0.00013076	3.4153	0.0018846	551.8025327486952	98.348	0.17673	98.605	98.475	98.651	0.25636	-0.012028	0.0019624	NaN	67.413	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5467400			5962	280	2922	2941							0.04317306976417967
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.8105956912041	2	540.810054	1079.60555	1.1466	0.0006201	-1.4533	-0.00078596	-0.30668	-0.00016586	540.809205018649	98.611	0.10982	98.611	98.528	98.638	0					5	3	2	0	0	0	0.026036	1	41252	41252		93.763	48.013	1	4150700			5963	3904	2923	2942	7375	7375					0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.8105956912041	2	540.810054	1079.60555	3.6189	0.0019571	-1.6322	-0.00088271	1.9867	0.0010744	540.809136611367	98.401	0.14154	98.629	98.556	98.698	0.22776					13	4	4	0	0	0	0.0033765	1	41422	41422		126.6	59.187	1	52367000			5964	3904	2923	2942	7376	7376					0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1080.617358386517	1	1080.61283	1079.60555	3.57	0.0038578	-1.0137	-0.0010954	2.5563	0.0027624	1080.6115635087017	98.401	0.11301	98.629	98.585	98.698	0.22776					7	3	3	0	0	0	0.026036	1	41435	41435		93.763	48.013	1	72934000			5965	3904	2923	2942	7377	7377					0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1080.619311511517	1	1080.61283	1079.60555	3.5212	0.0038051	1.5153	0.0016374	5.0365	0.0054425	1080.6143422044033	98.348	0.11752	98.605	98.534	98.651	0.25636					7	3	3	0	0	0	0.0084224	1	41379	41379		109.15	41.741	1	50773000			5966	3904	2923	2942	7378	7378					0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.8122436404228	2	540.810054	1079.60555	3.324	0.0017977	1.4799	0.00080034	4.8039	0.002598	540.8107690573257	98.348	0.11752	98.605	98.534	98.651	0.25636					8	3	3	0	0	0	0.0084224	1	41382	41382		109.15	29.22	1	17078000			5967	3904	2923	2942	7379	7379					0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1080.61283	1079.60555	1.3956	0.0015081	-6.9449	-0.0075047	-5.5492	-0.0059966	1080.6049378994262	98.601	0.081459	98.601	98.556	98.638	0	-0.010287	-0.0059593	NaN	109.15	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14943000			5968	3904	2923	2942							0.06893593493464323
FLYPFPLAL	9	Unmodified	_FLYPFPLAL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	540.810054	1079.60555	2.7666	0.0014962	-3.6273	-0.0019617	-0.86068	-0.00046546	540.807911291377	98.528	0.084137	98.609	98.566	98.65	0.080376	-0.0047533	-0.0033252	NaN	126.6	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2616200			5969	3904	2923	2942							0.06893593493464323
FLYPFSAAA	9	Unmodified	_FLYPFSAAA_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	986.4999267458916	1	986.498195	985.490919	1.6069	0.0015852	-1.1261	-0.0011109	0.48078	0.00047429	986.4972333715481	71.114	0.41582	71.114	70.811	71.227	0					21	12	2	0	0	0	0.22519	1	29578	29578		30.225	1.1432	1	739530			5970	3583	2924	2943	7380	7380					-0.0024071598847967834
FLYPFSAAA	9	Unmodified	_FLYPFSAAA_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	986.5050536990166	1	986.498195	985.490919	1.4518	0.0014322	-0.19777	-0.0001951	1.254	0.0012371	986.498530807882	70.543	0.55096	70.866	70.591	71.141	0.32224					29	17	2	0	0	0	0.1735	1	29530	29530		36.044	6.9626	1	755640			5971	3583	2924	2943	7381	7381					-0.0024071598847967834
FLYPFSAAA	9	Unmodified	_FLYPFSAAA_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.4988281130791	1	986.498195	985.490919	1.7222	0.0016989	-0.030732	-3.0317E-05	1.6915	0.0016686	986.4983021649327	68.87	0.59932	70.723	70.378	70.977	1.853					28	19	2	0	0	0	0.15478	1	28907	28907		38.151	2.107	1	1706100			5972	3583	2924	2943	7382	7382					-0.0024071598847967834
FLYSDEVQI	9	Unmodified	_FLYSDEVQI_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.2778808474541	2	557.276772	1112.53899	1.8301	0.0010199	1.5246	0.00084963	3.3547	0.0018695	557.2775025860354	62.711	0.28045	63.041	62.912	63.193	0.32974					15	8	2	0	0	0	0.3154	2	26297	26251;26297		24.674	12.142	1	1098900			5973	2566	2925	2944	7383;7384	7384					-0.012776868590890444
FLYSDEVQI	9	Unmodified	_FLYSDEVQI_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2776367068291	2	557.276772	1112.53899	2.9502	0.0016441	-0.90963	-0.00050692	2.0406	0.0011372	557.2763622824586	61.618	0.40221	63.035	62.804	63.206	1.4177					27	12	3	0	0	0	0.046276	2	25834	25789;25834		70.716	24.695	1	5159200			5974	2566	2925	2944	7385;7386	7386					-0.012776868590890444
FLYSDEVQI	9	Unmodified	_FLYSDEVQI_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1113.550830066204	1	1113.54627	1112.53899	2.5861	0.0028797	0.98191	0.0010934	3.568	0.0039731	1113.548002992592	61.618	0.28025	63.035	62.865	63.145	1.4177					13	8	2	0	0	0	0.09539	1	25829	25829		50.855	18.55	1	931500			5975	2566	2925	2944	7387	7387					-0.012776868590890444
FLYSDEVQI	9	Unmodified	_FLYSDEVQI_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2780029177666	2	557.276772	1112.53899	2.4258	0.0013519	-0.43099	-0.00024018	1.9948	0.0011117	557.2764484423636	61.086	0.43169	63.051	62.85	63.282	1.9653					31	13	3	0	0	0	0.069258	2	25651	25601;25651		60.39	22.9	1	5736000			5976	2566	2925	2944	7388;7389	7389					-0.012776868590890444
FLYSDEVQI	9	Unmodified	_FLYSDEVQI_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1113.54627	1112.53899	2.4663	0.0027463	-1.8975	-0.0021129	0.56879	0.00063337	1113.5459865344935	61.086	0.24465	63.051	62.942	63.187	1.9653	0.0079417	-0.0020606	NaN	50.855	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	841990			5977	2566	2925	2944							-0.012776868590890444
FLYSPDILI	9	Unmodified	_FLYSPDILI_					0	0	0		ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	540.8063232302666	2	540.802426	1079.5903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.649	1	88.741	88.241	89.241	1.0918								0	0	0	0.081484	1	36966	36966		38.151	6.0342	1				5978	6492	2926	2945	7390	7390					0.053686819056110835
FLYSPDILI	9	Unmodified	_FLYSPDILI_					0	0	0		ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1080.604174792767	1	1080.59757	1079.5903	4.9334	0.0053311	-0.74716	-0.00080738	4.1863	0.0045237	1080.5977507840455	87.192	0.24434	88.687	88.581	88.825	1.4953					12	7	2	0	0	0	0.09539	1	36758	36758		50.855	18.55	1	1000800			5979	6492	2926	2945	7391	7391					0.053686819056110835
FLYSPDILI	9	Unmodified	_FLYSPDILI_					0	0	0		ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	ENST00000429705.6_1_3:43328077-43344643:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.8047973513603	2	540.802426	1079.5903	4.7374	0.002562	-0.067648	-3.6584E-05	4.6697	0.0025254	540.8026179081679	87.287	0.43255	88.782	88.518	88.951	1.4953					22	13	2	0	0	0	0.22519	1	36772	36772		30.225	12.09	1	979640			5980	6492	2926	2945	7392	7392					0.053686819056110835
FMATIAEGL	9	Unmodified	_FMATIAEGL_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	952.4818603396416	1	952.480831	951.473554	2.1974	0.002093	0.63215	0.00060212	2.8295	0.0026951	952.481126941125	62.039	0.35014	63.456	63.206	63.556	1.4177					26	10	3	0	0	0	0.078975	2	25969	25969;26016		56.541	23.351	1	1767800			5981	2929	2927	2946	7393;7394	7393					-0.004123795857935875
FMATIAEGL	9	Unmodified	_FMATIAEGL_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	952.4822265505791	1	952.480831	951.473554	2.4569	0.0023402	0.19891	0.00018946	2.6558	0.0025296	952.4806220683224	61.433	0.35272	63.391	63.209	63.562	1.9571					25	10	3	0	0	0	0.033521	2	25797	25748;25797		81.864	32.195	1	1710800			5982	2929	2927	2946	7395;7396	7396					-0.004123795857935875
FMDDGGFNL	9	Unmodified	_FMDDGGFNL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;ENST00000366131.6_1_12:6462937-6464599:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.7661315798759	2	508.213117	1014.41168	2.504	0.0012726	0.039981	2.0319E-05	2.544	0.0012929	508.2130319701956	63.275	0.31869	65.22	65.058	65.377	1.9444					17	9	2	0	0	0	0.094078	1	26541	26541		12.532	0.89125	1	667170			5983	1733	2928	2947	7397	7397					-0.09494731004929235
FMDMDQDSEDE	11	Unmodified	_FMDMDQDSEDE_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2285644412041	2	681.229032	1360.44351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.558	1	20.768	20.268	21.268	0.21024								0	0	0	0.63775	1	8538	8538		0	0	1				5984	2143	2929	2948	7398	7398					-0.22229195894601617
FMDMDQDSEDE	11	Unmodified	_FMDMDQDSEDE_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2317382693291	2	681.229032	1360.44351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.659	1	42.98	42.48	43.48	0.32058								0	0	0	0.63775	1	17918	17918		0	0	1				5985	2143	2929	2948	7399	7399					-0.22229195894601617
FMDMDQDSEDE	11	Unmodified	_FMDMDQDSEDE_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2297851443291	2	681.229032	1360.44351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.773	1	43.094	42.594	43.594	0.32058								0	0	0	0.63775	1	17965	17965		0	0	1				5986	2143	2929	2948	7400	7400					-0.22229195894601617
FMDMDQDSEDE	11	Unmodified	_FMDMDQDSEDE_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A;nc|ENSG00000121892|Q29RF7-3|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	GG20161007_CRH_Patient100_W632_02	4	681.2293578982353	2	681.229032	1360.44351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.068	1	15.965	15.465	16.465	0.89664								0	0	0	0.63775	1	6251	6251		0	0	1				5987	2143	2929	2948	7401	7401					-0.22229195894601617
FMDSDSLC	8	Unmodified	_FMDSDSLC_					0	0	0			REV__ENSG00000138095|ENST00000260665|LRPPRC	REV__ENSG00000138095|ENST00000260665|LRPPRC	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1728088259697	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.487	1	95.611	95.111	96.111	0.12331								0	0	0	1.0178	1	39958	39958		0.79363	0	1		+		5988	10042	2930	2949	7402	7402					-0.1308575503933298
FMEPFLTLVDV	11	Unmodified	_FMEPFLTLVDV_					0	0	0			REV__tr|A0A553SP20|A0A553SP20_NIACItRNA(guanine-N(1)-)-methyltransferaseOS=NialliacirculansOX=1397GN=trmDPE=3SV=1	REV__tr|A0A553SP20|A0A553SP20_NIACItRNA(guanine-N(1)-)-methyltransferaseOS=NialliacirculansOX=1397GN=trmDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	655.3848754763603	2	655.838682	1309.66281	2.3904	0.0015677	0.52382	0.00034354	2.9143	0.0019113	655.8380700956055	80.261	0.34158	81.513	81.388	81.729	1.2512					19	10	2	0	0	0	0.14479	1	33681	33681		17.113	2.7075	1	1187100	+		5989	15069	2931	2950	7403	7403					0.020366479168615115
FMFDEKLVTV	10	Unmodified	_FMFDEKLVTV_					0	0	0		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.8184692263603	2	614.81775	1227.62095	1.9917	0.0012245	-1.1354	-0.00069804	0.85631	0.00052647	614.8171559404659	67.674	0.34605	67.674	67.504	67.85	0					28	10	4	0	0	0	0.13797	2	28208	28161;28208		57.249	35.712	1	2407700			5990	2072	2932	2951	7404;7405	7405					0.01624092228325935
FMFDEKLVTV	10	Unmodified	_FMFDEKLVTV_					0	0	0		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.8182861208916	2	614.81775	1227.62095	1.6895	0.0010387	-1.5753	-0.00096852	0.1142	7.021E-05	614.8167547689088	67.169	0.31687	67.492	67.366	67.683	0.32269					31	10	4	0	0	0	0.14932	2	28151	28098;28151		55.235	29.878	1	3644100			5991	2072	2932	2951	7406;7407	7407					0.01624092228325935
FMFDEKLVTV	10	Unmodified	_FMFDEKLVTV_					0	0	0		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.8192626833916	2	614.81775	1227.62095	1.9254	0.0011837	-1.246	-0.00076609	0.67932	0.00041766	614.8170083804705	65.956	0.5118	67.355	67.094	67.606	1.3989					52	16	5	0	0	0	0.0644	3	27630	27630;27681;27740		132.13	84.386	1	19955000			5992	2072	2932	2951	7408;7409;7410	7408					0.01624092228325935
FMFDEKLVTV	10	Unmodified	_FMFDEKLVTV_					0	0	0		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.8187133669853	2	614.81775	1227.62095	1.6457	0.0010118	-0.80883	-0.00049728	0.83685	0.00051451	614.8171998590401	65.542	0.46105	67.451	67.187	67.649	1.9085					42	14	4	0	0	0	0.062229	2	27494	27449;27494		117.84	77.888	1	19963000			5993	2072	2932	2951	7411;7412	7412					0.01624092228325935
FMFDEKLVTV	10	Oxidation (M)	_FM(Oxidation (M))FDEKLVTV_		FM(1)FDEKLVTV		FM(57)FDEKLVTV	0	0	1		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.8164550662041	2	622.815207	1243.61586	2.1998	0.0013701	1.4337	0.00089295	3.6335	0.002263	622.8160820361783	59.334	0.64986	60.753	60.527	61.176	1.4196					36	20	2	0	0	0	0.13797	2	24866	24866;24941		57.249	22.449	1	2708300			5994	2072	2932	2952	7413;7414	7413		39			0.0037978836571710417
FMFDEKLVTV	10	Oxidation (M)	_FM(Oxidation (M))FDEKLVTV_		FM(1)FDEKLVTV		FM(50)FDEKLVTV	0	0	1		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.3187133669853	2	622.815207	1243.61586	1.8708	0.0011652	1.1562	0.00072013	3.0271	0.0018853	622.8157210047851	58.831	0.82402	60.8	60.401	61.225	1.969					58	26	3	0	0	0	0.19554	1	24769	24769		49.527	33.378	1	3180500			5995	2072	2932	2952	7415	7415		39			0.0037978836571710417
FMFDEKLVTV	10	Oxidation (M)	_FM(Oxidation (M))FDEKLVTV_					0	0	1		nc|ENSG00000119414|O00743-2|PPP6C;ENSG00000119414|ENST00000373547|PPP6C;nc|ENSG00000119414|O00743-3|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	nc|ENSG00000119414|O00743-2|PPP6C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	622.815207	1243.61586	2.0824	0.0012969	1.4868	0.00092603	3.5692	0.002223	622.8161134619164	60.676	0.4441	61.004	60.696	61.14	0.32809	0.06675	0.00063875	NaN	57.249	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	959200			5996	2072	2932	2952				39			0.0037978836571710417
FMGNTSPSSSF	11	Unmodified	_FMGNTSPSSSF_					0	0	0			REV__nc|ENSG00000129204|P35125-2|USP6	REV__nc|ENSG00000129204|P35125-2|USP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.2487060427666	2	581.247689	1160.48082	4.4504	0.0025868	-2.3844	-0.0013859	2.0661	0.0012009	581.2464167512104	87.445	0.36956	88.537	88.335	88.704	1.0918					28	11	3	0	0	0	0.31168	1	36852	36852		31.268	2.7815	1	4145800	+		5997	9749	2933	2953	7416	7416					-0.09299691776004693
FMKILKLIV	9	Unmodified	_FMKILKLIV_					0	0	0		nc|ENSG00000143199|Q96PN6-4|ADCY10;nc|ENSG00000143199|Q96PN6-2|ADCY10;ENSG00000143199|ENST00000367851|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	nc|ENSG00000143199|Q96PN6-4|ADCY10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8665038943291	2	552.864306	1103.71406	3.0152	0.001667	1.6766	0.00092692	4.6918	0.0025939	552.8652262827638	107.51	0.2269	107.67	107.56	107.79	0.15781					45	11	5	0	0	0	0.84963	1	46291	46291		0.6015	0.20078	1	1739699999.9999998			5998	3018	2934	2954	7417	7417					0.1663506147224325
FMLAIALLSV	10	Unmodified	_FMLAIALLSV_					0	0	0			REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3229858279228	2	539.322471	1076.63039	1.9838	0.0010699	2.7557	0.0014862	4.7395	0.0025561	539.3230806129906	66.647	0.989	68.036	67.418	68.407	1.3888					61	31	4	0	0	0	0.38674	1	27943	27943		34.102	10.954	1	5062800	+		5999	15762	2935	2955	7418	7418					0.09513905304538639
FMLAIALLSV	10	Unmodified	_FMLAIALLSV_					0	0	0			REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3242675662041	2	539.322471	1076.63039	1.8207	0.00098194	2.4396	0.0013157	4.2603	0.0022977	539.3228500182837	66.205	0.92741	68.094	67.54	68.467	1.8889					72	29	4	0	0	0	0.45153	1	27762	27762		30.225	3.8835	1	4530400	+		6000	15762	2935	2955	7419	7419					0.09513905304538639
FMMVVGNCNK	10	Unmodified	_FMMVVGNCNK_					0	0	0			REV__nc|ENSG00000196642|Q3YEC7-4|RABL6	REV__nc|ENSG00000196642|Q3YEC7-4|RABL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5105468630791	3	381.510024	1141.50824	-0.21235	-8.1013E-05	0.35241	0.00013445	0.14006	5.3434E-05	381.5103893371297	0.68835	0.60163	1.4241	1.0384	1.64	0.73579					73	35	3	0	0	0	0.85617	1	328	328		6.1918	0	1	558420	+		6001	11644	2936	2956	7420	7420					-0.056852030409800136
FMNPHLISV	9	Unmodified	_FMNPHLISV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2841674685478	2	529.278595	1056.54264	1.8554	0.00098205	2.771	0.0014666	4.6264	0.0024487	529.2801768108808	51.063	0.34321	51.391	51.229	51.572	0.32824					23	10	3	0	0	0	0.10294	2	21428	21377;21428		48.346	34.838	1	1915400			6002	2806	2937	2957	7421;7422	7422					0.016627044337838015
FMNPHLISV	9	Unmodified	_FMNPHLISV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2794677615166	2	529.278595	1056.54264	2.3717	0.0012553	0.53301	0.00028211	2.9047	0.0015374	529.2793833988303	49.809	0.47155	51.2	51.011	51.482	1.3911					22	14	2	0	0	0	0.040497	1	20843	20843		75.761	47.274	1	3580900			6003	2806	2937	2957	7423	7423					0.016627044337838015
FMNPHLISV	9	Unmodified	_FMNPHLISV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2799560427666	2	529.278595	1056.54264	1.9109	0.0010114	0.26452	0.00014001	2.1754	0.0011514	529.2787329769674	49.211	0.34076	51.188	51.008	51.349	1.9772					19	10	2	0	0	0	0.031145	1	20620	20620		85.642	49.597	1	3907500			6004	2806	2937	2957	7424	7424					0.016627044337838015
FMNPHLISV	9	Unmodified	_FMNPHLISV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;nc|ENSG00000138002|Q9UG01-3|IFT172;ENST00000511842.5_1_2:27693746-27712529:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	529.278595	1056.54264	2.0633	0.0010921	2.0789	0.0011003	4.1422	0.0021924	529.2795583285151	51.584	0.30899	51.584	51.416	51.725	0	0.24326	0.00073467	NaN	85.642	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1929300			6005	2806	2937	2957							0.016627044337838015
FMPPLPVL	8	Unmodified	_FMPPLPVL_					0	0	0		ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	457.2648193240166	2	457.264425	912.514297	1.8894	0.00086394	-0.58041	-0.0002654	1.309	0.00059854	457.2641328858111	77.702	0.5619	77.702	77.47	78.032	0					46	17	4	0	0	0	0.89176	1	32338	32338		0.79363	0.79363	1	9950800			6006	7555	2938	2958	7425	7425					0.054540065244850666
FMPPLPVL	8	Unmodified	_FMPPLPVL_					0	0	0		ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	457.2655212283134	2	457.264425	912.514297	2.5673	0.0011739	-0.35768	-0.00016355	2.2096	0.0010104	457.2641214774168	77.617	0.5011	77.933	77.606	78.107	0.31653					43	15	4	0	0	0	0.89176	1	32461	32461		0.79363	0	1	9719700			6007	7555	2938	2958	7426	7426					0.054540065244850666
FMPPLPVL	8	Unmodified	_FMPPLPVL_					0	0	0		ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	457.264425	912.514297	2.7907	0.0012761	0.60762	0.00027784	3.3983	0.0015539	457.2646269920442	76.736	0.43665	78.03	77.762	78.199	1.2938	0.075923	0.00058694	NaN	0.79363	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5853000			6008	7555	2938	2958							0.054540065244850666
FMPPLPVL	8	Unmodified	_FMPPLPVL_					0	0	0		ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	457.264425	912.514297	2.946	0.0013471	0.3404	0.00015565	3.2864	0.0015028	457.264418030368	76.383	0.44457	78.15	77.909	78.353	1.7672	0.19645	0.00034257	NaN	0.79363	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4243200			6009	7555	2938	2958							0.054540065244850666
FMQEDTNPLEK	11	Unmodified	_FMQEDTNPLEK_					0	0	0		ENSG00000133665|ENST00000256039|DYDC2	ENSG00000133665|ENST00000256039|DYDC2	ENSG00000133665|ENST00000256039|DYDC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2114745974541	3	451.211465	1350.61257	0.89463	0.00040367	0.93114	0.00042014	1.8258	0.00082381	451.21204554773294	23.323	0.30451	23.323	23.139	23.444	0					14	9	2	0	0	0	0.98765	1	9709	9709		2.084	0	1	630550			6010	2578	2939	2959	7427	7427					-0.04871506478957599
FMVVGLLIL	9	Unmodified	_FMVVGLLIL_					0	0	0			REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	REV__ENST00000478112.1_1_10:71211350-71243770:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8155700564384	2	502.814282	1003.61401	0.89564	0.00045034	0.15921	8.0054E-05	1.0548	0.00053039	502.8143264285569	80.232	0.91013	81.948	81.291	82.201	1.7167					92	29	5	0	0	0	0.85403	1	33630	33630		0	0	1	105580000	+		6011	8946	2940	2960	7428	7428					0.11234824138466593
FNALQLGL	8	Unmodified	_FNALQLGL_					0	0	0			REV__ENSG00000100739|ENST00000216629|BDKRB1	REV__ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.2530090212822	2	438.252903	874.491253	2.3393	0.0010252	0.63604	0.00027875	2.9753	0.0013039	438.253003490329	63.162	0.28206	65.106	64.934	65.216	1.9444					15	8	2	0	0	0	0.83518	1	26515	26515		18.135	4.6271	1	1617200	+		6012	9004	2941	2961	7429	7429					0.04898703731362275
FNALQLGL	8	Unmodified	_FNALQLGL_					0	0	0			REV__ENSG00000100739|ENST00000216629|BDKRB1	REV__ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	438.252903	874.491253	2.3303	0.0010213	1.2978	0.00056875	3.6281	0.00159	438.25346581924765	63.722	0.27706	65.129	64.93	65.207	1.4071	0.011172	0.00010746	NaN	18.135	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1950900	+		6013	9004	2941	2961							0.04898703731362275
FNALQLGL	8	Unmodified	_FNALQLGL_					0	0	0			REV__ENSG00000100739|ENST00000216629|BDKRB1	REV__ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	438.252903	874.491253	2.3393	0.0010252	0.63604	0.00027875	2.9753	0.0013039	438.253003490329	63.162	0.28206	65.106	64.934	65.216	1.9444	-0.011172	-0.00047255	NaN	18.135	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1617200	+		6014	9004	2941	2961							0.04898703731362275
FNDAGEYH	8	Unmodified	_FNDAGEYH_					0	0	0		HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1;ENSG00000143341|ENST00000271588|HMCN1	HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant	HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.9046203494072	3	318.131363	951.37226	-3.2844	-0.0010449	-1.1426	-0.0003635	-4.4271	-0.0014084	318.1309122059104	16.902	0.25049	16.902	16.753	17.004	0					10	7	2	0	0	0	2.3239	1	7007	7007		0.45834	0	1	244750			6015	3025	2942	2962	7430	7430					-0.10537114964142802
FNDLKEAEII	10	Unmodified	_FNDLKEAEII_					0	0	0		tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	596.7729369997978	2	596.316428	1190.6183	3.2134	0.0019162	-2.4559	-0.0014645	0.75747	0.00045169	596.3151163169133	64.489	0.24566	65.896	65.77	66.016	1.4071					12	7	2	0	0	0	0.12437	1	27087	27087		18.146	0	1	762970			6016	16412	2943	2963	7431	7431					0.03061960095055838
FNDLKEAEII	10	Unmodified	_FNDLKEAEII_					0	0	0		tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	tr|A0A553SN99|A0A553SN99_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24045PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	596.316428	1190.6183	2.9796	0.0017768	-3.4491	-0.0020567	-0.46949	-0.00027997	596.3145814163718	63.929	0.21526	65.857	65.704	65.919	1.928	-0.019482	-0.00062557	NaN	18.146	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	736640			6017	16412	2943	2963							0.03061960095055838
FNEGSTTNAAG	11	Unmodified	_FNEGSTTNAAG_					0	0	0			REV__nc|ENSG00000170456|Q6ZUT9-4|DENND5B	REV__nc|ENSG00000170456|Q6ZUT9-4|DENND5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.8253356814384	3	356.824599	1067.45197	1.6614	0.00059284	0.13451	4.7997E-05	1.796	0.00064084	356.82477734756844	64.256	0.45707	65.663	65.466	65.923	1.4071					33	14	3	0	0	0	0.94496	1	26934	26934		3.5927	0	1	3813700	+		6018	14486	2944	2964	7432	7432					-0.07906093080828214
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1465942263603	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.396	1	39.396	38.896	39.896	0								0	0	0	1.0178	1	16511	16511		0	0	1		+		6019	11521	2945	2965	7433	7433					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1464721560478	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.654	1	46.654	46.154	47.154	0								0	0	0	1.0178	1	19502	19502		0	0	1		+		6020	11521	2945	2965	7434	7434					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1465942263603	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.38	1	51.38	50.88	51.88	0								0	0	0	1.0178	1	21429	21429		0	0	1		+		6021	11521	2945	2965	7435	7435					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1460449099541	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.406	1	66.406	65.906	66.906	0								0	0	0	1.0178	1	27662	27662		0	0	1		+		6022	11521	2945	2965	7436	7436					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1466247439384	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.328	1	75.653	75.153	76.153	0.32464								0	0	0	1.0178	1	31504	31504		0	0	1		+		6023	11521	2945	2965	7437	7437					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1466552615166	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.718	1	85.97	85.47	86.47	0.25227								0	0	0	1.0178	1	35843	35843		0	0	1		+		6024	11521	2945	2965	7438	7438					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1464416384697	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.644	1	73.974	73.474	74.474	1.3297								0	0	0	1.0178	1	30491	30491		0	0	1		+		6025	11521	2945	2965	7439	7439					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1462585330009	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1979	1	9.9324	9.4324	10.432	0.73452								0	0	0	1.0178	1	3827	3827		0	0	1		+		6026	11521	2945	2965	7440	7440					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1470825076103	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.223	1	16.119	15.619	16.619	0.89664								0	0	0	1.0178	1	6315	6315		0	0	1		+		6027	11521	2945	2965	7441	7441					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1464111208916	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.534	1	16.573	16.073	17.073	1.0392								0	0	0	1.0178	1	6444	6444		0	0	1		+		6028	11521	2945	2965	7442	7442					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1450683474541	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.697	1	57.665	57.165	58.165	1.9684								0	0	0	1.0178	1	23357	23357		0	0	1		+		6029	11521	2945	2965	7443	7443					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1446716189384	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.375	1	58.343	57.843	58.843	1.9684								0	0	0	1.0178	1	23642	23642		0	0	1		+		6030	11521	2945	2965	7444	7444					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1470825076103	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.855	1	60.824	60.324	61.324	1.969								0	0	0	1.0178	1	24695	24695		0	0	1		+		6031	11521	2945	2965	7445	7445					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1458007693291	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.978	1	61.947	61.447	62.447	1.969								0	0	0	1.0178	1	25170	25170		0	0	1		+		6032	11521	2945	2965	7446	7446					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1472350955009	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.265	1	62.23	61.73	62.73	1.9653								0	0	0	1.0178	1	25289	25289		0	0	1		+		6033	11521	2945	2965	7447	7447					-0.18706831022848291
FNGCCCNY	8	Unmodified	_FNGCCCNY_					0	0	0			REV__ENSG00000186980|ENST00000334160|KRTAP23-1	REV__ENSG00000186980|ENST00000334160|KRTAP23-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.1455261111259	2	462.145866	922.277179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.861	1	70.714	70.214	71.214	1.853								0	0	0	1.0178	1	28892	28892		0	0	1		+		6034	11521	2945	2965	7448	7448					-0.18706831022848291
FNHINVEL	8	Unmodified	_FNHINVEL_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2599059939384	2	493.258717	984.50288	1.9679	0.00097071	0.96563	0.00047631	2.9336	0.001447	493.2589447619378	41.476	0.29919	43.368	43.209	43.508	1.8927					18	9	3	0	0	0	0.46752	2	17362	17362;17417		50.855	15.003	1	2914300			6035	3714	2946	2966	7449;7450	7449					0.010009007546955218
FNIIIVKLFKK	11	Unmodified	_FNIIIVKLFKK_					0	0	0		ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.9680969119072	3	454.967236	1361.87988	1.1979	0.00054501	1.2979	0.0005905	2.4958	0.0011355	454.96790670899094	27.663	0.48541	27.663	27.289	27.775	0					28	15	3	0	0	0	1.0365	1	11566	11566		1.2148	0.51716	1	1307700			6036	7039	2947	2967	7451	7451					0.21341411252569742
FNIIIVKLFKK	11	Unmodified	_FNIIIVKLFKK_					0	0	0		ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	ENST00000511985.1_1_4:157691583-157731994:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	454.967236	1361.87988	0.87938	0.00040009	-1.9915	-0.00090607	-1.1121	-0.00050598	454.966205816931	26.16	0.12098	27.877	27.793	27.914	1.7167	0.10674	-0.0032931	NaN	1.2148	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	463580			6037	7039	2947	2967							0.21341411252569742
FNKFRENFIFF	11	Unmodified	_FNKFRENFIFF_					0	0	0			REV__ENSG00000204977|ENST00000378182|TRIM13	REV__ENSG00000204977|ENST00000378182|TRIM13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.2677184939384	3	503.59435	1507.76122	-0.22989	-0.00011577	-3.4348	-0.0017297	-3.6647	-0.0018455	503.5927685161082	51.152	0.82965	53.127	52.727	53.556	1.9753					47	30	2	0	0	0	0.14606	1	21526	21526		12.856	5.3789	1	5080100	+		6038	11808	2948	2968	7452	7452					0.027650122769273366
FNKLCHENH	9	Unmodified	_FNKLCHENH_					0	0	0			REV__ENST00000431872.1_1_9:68357853-68358255:-|nuORF	REV__ENST00000431872.1_1_9:68357853-68358255:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1814453005791	3	381.17843	1140.51346	1.6908	0.00064451	0.94208	0.0003591	2.6329	0.0010036	381.5120313730317	44.637	1.2143	44.964	44.425	45.639	0.32674					87	40	3	0	0	0	0.71526	1	18888	18888		4.1895	1.7547	1	1639000	+		6039	13032	2949	2969	7453	7453					-0.05117439862488027
FNKLLMII	8	Unmodified	_FNKLLMII_					0	0	0			REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	REV__nc|ENSG00000095627|Q9BXT4-2|TDRD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3057433962822	2	496.304081	990.59361	2.5178	0.0012496	0.32024	0.00015894	2.8381	0.0014085	496.3039411794191	80.22	0.52987	80.521	80.258	80.788	0.30046					46	16	4	0	0	0	0.89176	1	33480	33480		0.79363	0	1	9685600	+		6040	8929	2950	2970	7454	7454					0.09793653478641318
FNKRKQML	8	Unmodified	_FNKRKQML_					0	0	0			REV__ENST00000505747.5_1_2:39997124-39997175:-|nuORF	REV__ENST00000505747.5_1_2:39997124-39997175:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0698425173759	3	355.5393	1063.59607	0.76751	0.00027288	4.3331	0.0015406	5.1006	0.0018135	355.5409554920782	29.098	0.18097	29.377	29.26	29.441	0.2793					8	5	2	0	0	0	2.3239	1	12182	12182		0.45834	0	1	177440	+		6041	13534	2951	2971	7455	7455					0.06681501936304812
FNLEQLDWDKE	11	Unmodified	_FNLEQLDWDKE_					0	0	0		tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.5631591677666	3	479.561263	1435.66196	2.2844	0.0010955	2.5938	0.0012439	4.8782	0.0023394	479.5623863280928	48.293	0.78194	48.293	48.092	48.874	0					74	24	5	0	0	0	0.98155	1	20181	20181		2.2527	0	1	3529900			6042	16054	2952	2972	7456	7456					-0.03844475198479813
FNLEQLDWDKE	11	Unmodified	_FNLEQLDWDKE_					0	0	0		tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.5644409060478	3	479.561263	1435.66196	2.5568	0.0012262	1.7227	0.00082616	4.2796	0.0020523	479.5624189583528	47.522	0.41008	47.853	47.636	48.046	0.33034					37	13	4	0	0	0	1.0214	1	19904	19904		1.0136	0	1	3714800			6043	16054	2952	2972	7457	7457					-0.03844475198479813
FNLLAVLSY	9	Unmodified	_FNLLAVLSY_					0	0	0		ENST00000462375.5_1_9:134384326-134385572:+|nuORF;POMT1|p.V470Efs*15|1|0.06|ENSG00000130714|chr9:131518514-131518515|GT/-|frameshift_variant;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2969238162041	2	520.294768	1038.57498	3.9965	0.0020793	-0.070407	-3.6632E-05	3.9261	0.0020427	520.2948279018768	82.184	1.0984	83.396	83.038	84.136	1.2125					88	34	4	0	0	0	0.051699	2	34440	34440;34623		67.344	22.937	1	9707600			6044	2453	2953	2973	7458;7459	7458					0.057238151084447964
FNLLAVLSY	9	Unmodified	_FNLLAVLSY_					0	0	0		ENST00000462375.5_1_9:134384326-134385572:+|nuORF;POMT1|p.V470Efs*15|1|0.06|ENSG00000130714|chr9:131518514-131518515|GT/-|frameshift_variant;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1039.586596667767	1	1039.58226	1038.57498	3.4444	0.0035807	1.8893	0.0019641	5.3337	0.0055448	1039.5840717795088	82.12	0.44127	83.333	83.192	83.634	1.2125					21	13	2	0	0	0	0.10294	2	34468	34468;34521		48.346	3.9388	1	1864400			6045	2453	2953	2973	7460;7461	7460					0.057238151084447964
FNLLAVLSY	9	Unmodified	_FNLLAVLSY_					0	0	0		ENST00000462375.5_1_9:134384326-134385572:+|nuORF;POMT1|p.V470Efs*15|1|0.06|ENSG00000130714|chr9:131518514-131518515|GT/-|frameshift_variant;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2967407107353	2	520.294768	1038.57498	3.9481	0.0020542	-0.40391	-0.00021015	3.5442	0.001844	520.2947728666796	81.702	1.0628	83.398	83.136	84.199	1.6959					84	33	4	0	0	0	0.033794	4	34246	34246;34295;34347;34415		81.613	3.8468	1	7500900			6046	2453	2953	2973	7462;7463;7464;7465	7462					0.057238151084447964
FNLLAVLSY	9	Unmodified	_FNLLAVLSY_					0	0	0		ENST00000462375.5_1_9:134384326-134385572:+|nuORF;POMT1|p.V470Efs*15|1|0.06|ENSG00000130714|chr9:131518514-131518515|GT/-|frameshift_variant;nc|ENSG00000130714|Q9Y6A1-4|POMT1;nc|ENSG00000130714|Q9Y6A1-3|POMT1;ENSG00000130714|ENST00000402686|POMT1;nc|ENSG00000130714|Q9Y6A1|POMT1	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	ENST00000462375.5_1_9:134384326-134385572:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1039.592822253704	1	1039.58226	1038.57498	5.0034	0.0052014	-1.2806	-0.0013313	3.7227	0.0038701	1039.5814325853826	81.733	0.47029	83.428	83.226	83.697	1.6959					19	14	2	0	0	0	0.083604	1	34299	34299		54.774	10.367	1	1589100			6047	2453	2953	2973	7466	7466					0.057238151084447964
FNLLILDIS	9	Unmodified	_FNLLILDIS_					0	0	0			REV__tr|A0A553STU9|A0A553STU9_NIACIDinBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05770PE=4SV=1	REV__tr|A0A553STU9|A0A553STU9_NIACIDinBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05770PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.7708007693291	2	524.307875	1046.6012	1.371	0.0007188	2.027	0.0010628	3.398	0.0017816	524.3082927343453	68.85	0.73985	70.703	70.648	71.387	1.853					30	23	2	0	0	0	0.11071	1	29138	29138		10.824	0	1	2418200	+		6048	15263	2954	2974	7467	7467					0.07976084279903262
FNLQAFEGKTF	11	Unmodified	_FNLQAFEGKTF_					0	0	0		ENST00000490844.1_1_10:50943276-50946169:-|nuORF;nc|ENSG00000197444|Q9ULD0-3|OGDHL;nc|ENSG00000197444|Q9ULD0-2|OGDHL;ENSG00000197444|ENST00000374103|OGDHL	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	651.8353759646416	2	651.32987	1300.64519	4.7307	0.0030813	-1.7144	-0.0011166	3.0164	0.0019647	651.3285074918849	88.268	0.28428	89.715	89.572	89.856	1.4467					21	8	3	0	0	0	0.91768	1	37252	37252		8.7454	0.58988	1	1677700			6049	5007	2955	2975	7468	7468					0.006890687061968492
FNLQNVLEQW	10	Unmodified	_FNLQNVLEQW_					0	0	0		nc|ENSG00000173809|Q587J7|TDRD12;chr19:32801873-32802656|139|14.81|0.36|5.35|+|ENST00000647536|TDRD12,TDRD12;chr19:32821139-32826098|165|14.05|0.47|4.9|+|ENST00000647536|TDRD12,TDRD12;chr19:32818157-32821033|152|13.22|0.53|4.64|+|ENST00000647536|TDRD12,TDRD12;chr19:32815620-32818089|135|13.1|0.49|4.75|+|ENST00000647536|TDRD12,TDRD12;chr19:32813776-32815448|139|16.72|0.53|4.98|+|ENST00000647536|TDRD12,TDRD12;chr19:32811420-32813684|131|15.54|0.45|5.12|+|ENST00000647536|TDRD12,TDRD12;chr19:32810277-32811210|156|14.54|0.46|4.99|+|ENST00000647536|TDRD12,TDRD12;chr19:32807648-32810093|114|14.91|0.34|5.48|+|ENST00000647536|TDRD12,TDRD12;chr19:32802789-32802922|108|15.69|0.41|5.25|+|ENST00000647536|TDRD12,TDRD12;chr19:32800772-32801756|126|14.63|0.37|5.31|+|ENST00000647536|TDRD12,TDRD12;chr19:32798435-32800167|100|13.01|0.19|6.13|+|ENST00000647536|TDRD12,TDRD12;chr19:32803142-32807549|130|16.52|0.36|5.5|+|ENST00000444215|TDRD12,TDRD12;chr19:32797891-32798308|119|12.01|0.22|5.75|+|ENST00000647536|TDRD12,TDRD12;chr19:32794813-32797735|98|12.42|0.27|5.5|+|ENST00000647536|TDRD12,TDRD12;chr19:32791068-32794628|119|12.08|0.3|5.31|+|ENST00000647536|TDRD12,TDRD12;chr19:32790591-32790964|124|10.79|0.19|5.84|+|ENST00000647536|TDRD12,TDRD12;chr19:32749869-32755992|122|31.96|0.99|5.02|+|ENST00000647536|TDRD12,TDRD12;chr19:32748531-32749784|99|29.09|0.97|4.91|+|ENST00000647536|TDRD12,TDRD12;chr19:32738992-32742781|92|29.05|0.94|4.95|+|ENST00000647536|TDRD12,TDRD12;chr19:32800358-32800644|113|15.08|0.33|5.5|+|ENST00000647536|TDRD12,TDRD12;ENSG00000173809|ENST00000639142|TDRD12;chr19:32731883-32738856|104|28.57|0.86|5.06|+|ENST00000647536|TDRD12,TDRD12	nc|ENSG00000173809|Q587J7|TDRD12	nc|ENSG00000173809|Q587J7|TDRD12	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887817263603	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.756	1	85.393	84.893	85.893	1.6379								0	0	0	0.66218	1	35129	35129		0.77653	0.54069	1				6050	230	2956	2976	7469	7469					0.0072018456346540916
FNSILFFIL	9	Unmodified	_FNSILFFIL_					0	0	0			REV__ENST00000264716.8_1_2:28616145-28616232:+|nuORF	REV__ENST00000264716.8_1_2:28616145-28616232:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	556.8027221560478	2	557.320786	1112.62702	1.2661	0.0007056	1.6499	0.0009195	2.9159	0.0016251	557.319990627836	70.572	0.42434	72.41	72.228	72.653	1.8378					21	13	2	0	0	0	0.092938	1	29554	29554		27.629	8.3718	1	2331300	+		6051	12216	2957	2977	7470	7470					0.0752097852218867
FNSILLLLPP	10	Unmodified	_FNSILLLLPP_					0	0	0			REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	REV__ENST00000271843.8_1_1:153946752-153946992:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2328369021416	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.289	1	94.161	93.661	94.661	0.87176								0	0	0	0.66227	1	39263	39263		0.62683	0.35781	1		+		6052	12237	2958	2978	7471	7471					0.12196936584996365
FNSLNGYKCF	10	Unmodified	_FNSLNGYKCF_					0	0	0			REV__nc|ENSG00000037280|P35916-1|FLT4	REV__nc|ENSG00000037280|P35916-1|FLT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7762939333916	2	596.776416	1191.53828	2.6589	0.0015868	-3.5171	-0.0020989	-0.85821	-0.00051216	596.7741457842287	80.516	0.36771	81.767	81.544	81.912	1.2512					35	11	5	0	0	0	0.6819	1	33778	33778		19.257	1.1106	1	4425100	+		6053	8585	2959	2979	7472	7472					-0.04982804779797334
FNSLNGYKCF	10	Unmodified	_FNSLNGYKCF_					0	0	0			REV__nc|ENSG00000037280|P35916-1|FLT4	REV__nc|ENSG00000037280|P35916-1|FLT4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	596.776416	1191.53828	1.261	0.00075253	-1.0845	-0.00064722	0.17647	0.00010531	596.7751874421801	80.061	0.34237	81.778	81.537	81.879	1.7167	0.0052297	0.0016685	NaN	19.257	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2314100	+		6054	8585	2959	2979							-0.04982804779797334
FNSRWWDYSDN	11	Unmodified	_FNSRWWDYSDN_					0	0	0		tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2095825076103	3	497.209224	1488.60584	0.18599	9.2476E-05	0.985	0.00048975	1.171	0.00058223	497.20995388142717	10.075	0.8195	10.075	9.4572	10.277	0					83	29	4	0	0	0	0.87205	3	4168	4068;4117;4168		9.2438	7.1598	1	15860000			6055	16967	2960	2980	7473;7474;7475	7475					-0.11891683315275259
FNSRWWDYSDN	11	Unmodified	_FNSRWWDYSDN_					0	0	0		tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	497.209224	1488.60584	-0.034143	-1.6976E-05	1.5206	0.00075608	1.4865	0.0007391	497.2098958543769	9.1634	0.21817	9.8979	9.7705	9.9887	0.73452	-0.088534	0.00051497	NaN	9.2438	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243140			6056	16967	2960	2980							-0.11891683315275259
FNVKVKLRRRR	11	Unmodified	_FNVKVKLRRRR_					0	0	0			REV__ENSG00000219626|ENST00000615575|FAM228B	REV__ENSG00000219626|ENST00000615575|FAM228B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1471.950488269329	1	1471.94444	1470.93717	2.7366	0.0040281	0.41136	0.0006055	3.148	0.0046336	1471.946192300698	106.94	0.090958	107.1	107.03	107.12	0.15781					11	3	4	0	0	0	1.0395	1	45893	45893		0.30703	0.30703	1	20585000	+		6057	11874	2961	2981	7476	7476					0.22053691301516665
FNVKVKLRRRR	11	Unmodified	_FNVKVKLRRRR_					0	0	0			REV__ENSG00000219626|ENST00000615575|FAM228B	REV__ENSG00000219626|ENST00000615575|FAM228B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1471.948901355267	1	1471.94444	1470.93717	2.1033	0.0030959	0.041106	6.0506E-05	2.1444	0.0031564	1471.9445337234838	106.93	0.089783	107.09	107.02	107.11	0.16174					8	3	3	0	0	0	1.0395	1	45831	45831		0.30703	0.30703	1	17021000	+		6058	11874	2961	2981	7477	7477					0.22053691301516665
FNVKVKLRRRR	11	Unmodified	_FNVKVKLRRRR_					0	0	0			REV__ENSG00000219626|ENST00000615575|FAM228B	REV__ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1471.94444	1470.93717	2.7366	0.0040281	0.41136	0.0006055	3.148	0.0046336	1471.946192300698	106.94	0.090958	107.1	107.03	107.12	0.15781	0.0049691	0.00024663	NaN	0.30703	11	3	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20585000	+		6059	11874	2961	2981							0.22053691301516665
FNVKVKLRRRR	11	Unmodified	_FNVKVKLRRRR_					0	0	0			REV__ENSG00000219626|ENST00000615575|FAM228B	REV__ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1471.94444	1470.93717	2.1033	0.0030959	0.041106	6.0506E-05	2.1444	0.0031564	1471.9445337234838	106.93	0.089783	107.09	107.02	107.11	0.16174	-0.0049691	-0.00029836	NaN	0.30703	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17021000	+		6060	11874	2961	2981							0.22053691301516665
FNYSDSSN	8	Unmodified	_FNYSDSSN_					0	0	0		ENSG00000105929|ENST00000310018|ATP6V0A4	ENSG00000105929|ENST00000310018|ATP6V0A4	ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.1831848025322	2	467.182872	932.35119	1.3924	0.00065049	0.77765	0.00036331	2.17	0.0010138	467.1832178642656	24.215	0.40469	24.215	24.056	24.461	0					23	12	2	0	0	0	0.84871	2	10102	10102;10151		16.942	1.0951	1	479400			6061	1546	2962	2982	7478;7479	7478					-0.11769125063653973
FPAEPLEL	8	Unmodified	_FPAEPLEL_					0	0	0		nc|ENSG00000109111|Q7KZ85-3|SUPT6H;ENSG00000109111|ENST00000314616|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	915.4838744997978	1	915.482211	914.474934	1.8883	0.0017287	0.10912	9.9901E-05	1.9974	0.0018286	915.4832129754136	66.03	0.57721	67.429	67.152	67.73	1.3989					25	18	2	0	0	0	0.15741	1	27724	27724		85.357	14.641	1	1077000			6062	1657	2963	2983	7480	7480					0.0142757777460929
FPAEPLEL	8	Unmodified	_FPAEPLEL_					0	0	0		nc|ENSG00000109111|Q7KZ85-3|SUPT6H;ENSG00000109111|ENST00000314616|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	nc|ENSG00000109111|Q7KZ85-3|SUPT6H	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	915.482211	914.474934	1.7119	0.0015673	0.32579	0.00029825	2.0377	0.0018655	915.481249912928	65.525	0.61113	67.434	67.187	67.799	1.9085	0.0021915	9.9157E-05	NaN	85.357	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1233200			6063	1657	2963	2983							0.0142757777460929
FPALLLPLLPW	11	Unmodified	_FPALLLPLLPW_					0	0	0		ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2656127810478	3	427.265282	1278.77402	1.0355	0.00044245	-0.90619	-0.00038718	0.12935	5.5266E-05	427.26482516564323	42.65	1.0747	42.65	42.384	43.459	0					143	34	5	0	0	0	1.0357	1	17825	17825		1.4551	0.34536	1	51340000			6064	6200	2964	2984	7481	7481					0.14578075407143842
FPALLLPLLPW	11	Unmodified	_FPALLLPLLPW_					0	0	0		ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2650939822197	3	427.265282	1278.77402	2.1191	0.00090541	-1.6092	-0.00068756	0.50987	0.00021785	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	1.0357	1	17657	17657		1.4551	0.24029	1	48247000			6065	6200	2964	2984	7482	7482					0.14578075407143842
FPALLLPLLPW	11	Unmodified	_FPALLLPLLPW_					0	0	0		ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	ENST00000377658.8_1_1:6651717-6651999:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.3930541872978	2	640.394285	1278.77402	1.3814	0.00088467	-2.316	-0.0014832	-0.93457	-0.00059849	640.3916693199089	39.523	0.18253	41.386	41.309	41.492	1.8624					8	5	2	0	0	0	1.0357	1	16580	16580		0.35063	0	1	624800			6066	6200	2964	2984	7483	7483					0.14578075407143842
FPAPGKTVTL	10	Unmodified	_FPAPGKTVTL_					0	0	0		nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D;ENST00000473682.5_1_1:111738432-111738684:-|nuORF	nc|ENSG00000162777|Q9H6A0-2|DENND2D	nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7984496951103	2	515.800217	1029.58588	2.3217	0.0011975	-4.2612	-0.0021979	-1.9396	-0.0010004	515.7974540587746	38.979	0.46913	40.275	40.038	40.507	1.2961					24	14	2	0	0	0	0.4341	2	16298	16298;16373		31.268	3.6395	1	1728400			6067	3647	2965	2985	7484;7485	7484					0.07227217482704873
FPAPGKTVTL	10	Unmodified	_FPAPGKTVTL_					0	0	0		nc|ENSG00000162777|Q9H6A0-2|DENND2D;ENSG00000162777|ENST00000357640|DENND2D;ENST00000473682.5_1_1:111738432-111738684:-|nuORF	nc|ENSG00000162777|Q9H6A0-2|DENND2D	nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8011962771416	2	515.800217	1029.58588	1.3338	0.00068799	-2.7515	-0.0014192	-1.4176	-0.00073122	515.7987854337788	38.357	0.47084	40.193	39.99	40.461	1.8366					25	14	2	0	0	0	0.38174	2	16073	16073;16137		34.402	0	1	1407000			6068	3647	2965	2985	7486;7487	7486					0.07227217482704873
FPAVVPGPSL	10	Unmodified	_FPAVVPGPSL_					0	0	0		ENST00000591730.5_1_19:36387813-36389376:-|nuORF;ENST00000586361.5_1_19:36387813-36391404:-|nuORF;ENST00000588497.2_1_19:36386996-36388558:-|nuORF;nc|ENSG00000167604|Q8NI38|NFKBID;ENSG00000167604|ENST00000606253|NFKBID	ENST00000591730.5_1_19:36387813-36389376:-|nuORF	ENST00000591730.5_1_19:36387813-36389376:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2833129763603	2	492.28166	982.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.86	1	105.03	104.53	105.53	0.16679								0	0	0	0.66166	1	44478	44478		1.6526	0.85899	1				6069	3978	2966	2986	7488	7488					0.056795459369595847
FPAYERVVL	9	Unmodified	_FPAYERVVL_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1;ENST00000462916.1_1_15:30024631-30025027:-|nuORF	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3050414919853	2	547.305667	1092.59678	1.9514	0.001068	-1.2145	-0.00066473	0.73689	0.00040331	547.3046358071939	49.631	0.62075	51.023	50.735	51.355	1.3911					40	19	3	0	0	0	0.087723	3	20772	20724;20772;20826		53.404	20.618	1	2974700			6070	1449	2967	2987	7489;7490;7491	7490					0.05418619857005069
FPAYERVVL	9	Unmodified	_FPAYERVVL_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1;ENST00000462916.1_1_15:30024631-30025027:-|nuORF	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3052245974541	2	547.305667	1092.59678	1.7508	0.0009582	-1.347	-0.00073724	0.40373	0.00022096	547.3044034380805	49.035	0.64895	51.012	50.7	51.349	1.9772					46	20	3	0	0	0	0.11077	3	20499	20499;20550;20605		45.74	13.434	1	2706200			6071	1449	2967	2987	7492;7493;7494	7492					0.05418619857005069
FPDEFHLQTL	10	Unmodified	_FPDEFHLQTL_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46710493-46715410:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.8114501833916	2	623.808771	1245.60299	2.6034	0.001624	-0.64946	-0.00040514	1.954	0.0012189	623.8085064462981	62.385	0.46357	63.803	63.556	64.02	1.4177					39	14	4	0	0	0	0.050585	3	26101	26101;26149;26219		97.741	59.126	1	3588500			6072	843	2968	2988	7495;7496;7497	7495					-0.009989067021479059
FPDEFHLQTL	10	Unmodified	_FPDEFHLQTL_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF;ENST00000569950.1_1_16:46710493-46715410:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8098632693291	2	623.808771	1245.60299	2.1625	0.001349	-0.6735	-0.00042014	1.489	0.00092885	623.808681646495	61.774	0.46883	63.731	63.53	63.999	1.9571					38	14	3	0	0	0	0.050585	2	25937	25889;25937		93.938	59.006	1	3653500			6073	843	2968	2988	7498;7499	7499					-0.009989067021479059
FPDEKIPTL	9	Unmodified	_FPDEKIPTL_					0	0	0		ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2900268435478	2	530.289682	1058.56481	2.5445	0.0013493	-1.8265	-0.0009686	0.718	0.00038075	530.2894102765955	50.052	1.0948	51.443	50.888	51.983	1.3911					80	34	3	0	0	0	0.0061207	6	20952	20801;20905;20952;20991;21032;21084		117.76	59.082	1	4202000			6074	499	2969	2989	7500;7501;7502;7503;7504;7505	7502					0.037872073831977104
FPDEKIPTL	9	Unmodified	_FPDEKIPTL_					0	0	0		ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2915527224541	2	530.289682	1058.56481	1.9078	0.0010117	-0.91392	-0.00048464	0.99392	0.00052706	530.2896803711265	49.423	1.0905	51.4	50.917	52.007	1.9772					91	34	3	0	0	0	0.010388	7	20850	20570;20671;20716;20755;20797;20850;20904		107.1	52.326	1	5055500			6075	499	2969	2989	7506;7507;7508;7509;7510;7511;7512	7511					0.037872073831977104
FPDEKIPTL	9	Unmodified	_FPDEKIPTL_					0	0	0		ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	ENSG00000006007|ENST00000353258|GDE1	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2886840701103	2	530.289682	1058.56481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.213	1	52.19	51.69	52.69	1.9772								0	0	0	0.026166	1	21032	21032		76.825	30.804	1				6076	499	2969	2989	7513	7513					0.037872073831977104
FPDELEEML	9	Unmodified	_FPDELEEML_					0	0	0		ENSG00000051382|ENST00000674063|PIK3CB	ENSG00000051382|ENST00000674063|PIK3CB	ENSG00000051382|ENST00000674063|PIK3CB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.3245117068291	2	561.754815	1121.49508	2.5358	0.0014245	1.1541	0.00064833	3.6899	0.0020728	561.7555872748625	77.469	0.19307	78.75	78.663	78.856	1.2809					7	5	2	0	0	0	0.11071	1	32509	32509		15.847	13.544	1	665140			6077	703	2970	2990	7514	7514					-0.06081039347736805
FPDEVLQLI	9	Unmodified	_FPDEVLQLI_					0	0	0		ENST00000473791.1_1_20:31961838-31967344:-|nuORF;nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1;ENSG00000101391|ENST00000346416|CDK5RAP1;nc|ENSG00000101391|Q96SZ6|CDK5RAP1	ENST00000473791.1_1_20:31961838-31967344:-|nuORF	ENST00000473791.1_1_20:31961838-31967344:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3010742068291	2	537.297507	1072.58046	5.6401	0.0030304	1.0786	0.0005795	6.7186	0.0036099	537.297213275976	89.195	0.69868	90.215	90.01	90.708	1.0199					34	21	3	0	0	0	0.30098	1	37574	37574		25.399	5.9603	1	1653700			6078	1344	2971	2991	7515	7515					0.047074939002413885
FPDEVLQLI	9	Unmodified	_FPDEVLQLI_					0	0	0		ENST00000473791.1_1_20:31961838-31967344:-|nuORF;nc|ENSG00000101391|Q96SZ6-5|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-2|CDK5RAP1;nc|ENSG00000101391|Q96SZ6-6|CDK5RAP1;ENSG00000101391|ENST00000346416|CDK5RAP1;nc|ENSG00000101391|Q96SZ6|CDK5RAP1	ENST00000473791.1_1_20:31961838-31967344:-|nuORF	ENST00000473791.1_1_20:31961838-31967344:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3005248904228	2	537.297507	1072.58046	4.8372	0.002599	-0.45079	-0.00024221	4.3864	0.0023568	537.2971886319095	88.769	0.38483	90.215	90.017	90.402	1.4467					23	11	3	0	0	0	0.42305	1	37448	37448		19.257	4.4187	1	1015300			6079	1344	2971	2991	7516	7516					0.047074939002413885
FPDFPTPGVVF	11	Unmodified	_FPDFPTPGVVF_					0	0	0		nc|ENSG00000198931|P07741-2|APRT;ENSG00000198931|ENST00000378364|APRT;ENST00000564858.1_1_16:88877682-88878307:-|nuORF	nc|ENSG00000198931|P07741-2|APRT	nc|ENSG00000198931|P07741-2|APRT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	611.4019653201103	2	611.810782	1221.60701	4.0284	0.0024646	1.6091	0.00098446	5.6375	0.0034491	611.8117802675675	91.429	0.74385	92.411	92.039	92.783	0.98156					37	23	2	0	0	0	0.13549	1	38530	38530		34.402	21.359	1	815770			6080	5104	2972	2992	7517	7517					0.005071827915571703
FPDFPTPGVVF	11	Unmodified	_FPDFPTPGVVF_					0	0	0		nc|ENSG00000198931|P07741-2|APRT;ENSG00000198931|ENST00000378364|APRT;ENST00000564858.1_1_16:88877682-88878307:-|nuORF	nc|ENSG00000198931|P07741-2|APRT	nc|ENSG00000198931|P07741-2|APRT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	611.4033691287041	2	611.810782	1221.60701	3.5036	0.0021436	1.6175	0.00098959	5.1211	0.0031332	611.8123097717028	91.001	0.56759	92.367	92.06	92.627	1.366					29	17	2	0	0	0	0.13836	1	38333	38333		22.736	6.8891	1	894850			6081	5104	2972	2992	7518	7518					0.005071827915571703
FPDGSFIQNL	10	Unmodified	_FPDGSFIQNL_					0	0	0		nc|ENSG00000171566|O43660-2|PLRG1;ENSG00000171566|ENST00000499023|PLRG1	nc|ENSG00000171566|O43660-2|PLRG1	nc|ENSG00000171566|O43660-2|PLRG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2811157107353	2	569.282389	1136.55022	2.6517	0.0015096	-2.7488	-0.0015649	-0.097131	-5.5295E-05	569.7823692331542	73.09	0.81888	74.901	74.512	75.331	1.8101					49	25	3	0	0	0	0.65574	1	30611	30611		20.454	2.3186	1	889270			6082	4197	2973	2993	7519	7519					-0.012588647649636187
FPDKVAIQL	9	Unmodified	_FPDKVAIQL_					0	0	0		ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;ENSG00000068976|ENST00000164139|PYGM	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.8026611208916	2	515.800217	1029.58588	0.99475	0.00051309	2.0551	0.00106	3.0499	0.0015731	515.8007336289311	53.045	0.9071	54.446	54.027	54.934	1.4005					50	33	2	0	0	0	0.042285	3	22190	22190;22236;22281		74.2	22.784	1	6998000			6083	1316	2974	2994	7520;7521;7522	7520					0.07227217482704873
FPDKVAIQL	9	Unmodified	_FPDKVAIQL_					0	0	0		ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;ENSG00000068976|ENST00000164139|PYGM	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8016235232353	2	515.800217	1029.58588	1.3725	0.00070792	1.2535	0.00064654	2.626	0.0013545	515.8006363065839	52.533	0.95254	54.505	54.047	55	1.9722					56	38	2	0	0	0	0.046715	3	22060	21983;22022;22060		70.332	22.738	1	7711500			6084	1316	2974	2994	7523;7524;7525	7525					0.07227217482704873
FPDPAGKLNQF	11	Unmodified	_FPDPAGKLNQF_					0	0	0		ENST00000482043.1_1_7:6968215-6970400:+|nuORF;ENST00000450217.2_1_11:3427793-3430002:+|nuORF;nc|ENSG00000033011|Q9BT22-2|ALG1;ENSG00000033011|ENST00000262374|ALG1	ENST00000482043.1_1_7:6968215-6970400:+|nuORF	ENST00000482043.1_1_7:6968215-6970400:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3152343630791	2	617.316763	1232.61897	2.1162	0.0013064	-2.8765	-0.0017757	-0.76026	-0.00046932	617.3139969592969	47.65	0.50835	49.033	48.695	49.204	1.3825					24	15	2	0	0	0	0.42228	1	19958	19958		26.268	10.119	1	807130			6085	638	2975	2995	7526	7526					0.011967995347276883
FPDPAGKLNQF	11	Unmodified	_FPDPAGKLNQF_					0	0	0		ENST00000482043.1_1_7:6968215-6970400:+|nuORF;ENST00000450217.2_1_11:3427793-3430002:+|nuORF;nc|ENSG00000033011|Q9BT22-2|ALG1;ENSG00000033011|ENST00000262374|ALG1	ENST00000482043.1_1_7:6968215-6970400:+|nuORF	ENST00000482043.1_1_7:6968215-6970400:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3192626833916	2	617.316763	1232.61897	2.1944	0.0013546	-2.8818	-0.001779	-0.68744	-0.00042437	617.313777093952	47.121	0.44159	49.097	48.87	49.311	1.976					21	13	2	0	0	0	0.24501	1	19726	19726		36.506	14.969	1	784580			6086	638	2975	2995	7527	7527					0.011967995347276883
FPDQVAIQL	9	Unmodified	_FPDQVAIQL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7838012576103	2	515.782025	1029.5495	2.0549	0.0010599	1.3206	0.00068112	3.3754	0.001741	515.7821634625237	67.074	1.164	68.462	68.089	69.253	1.3888					99	37	3	0	0	0	0.029061	7	28082	28038;28082;28119;28161;28213;28267;28331		88.954	30.275	1	9868300			6087	1284	2976	2996	7528;7529;7530;7531;7532;7533;7534	7529					0.035903405860153725
FPDQVAIQL	9	Unmodified	_FPDQVAIQL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7835571169853	2	515.782025	1029.5495	1.6796	0.00086633	1.6913	0.00087236	3.371	0.0017387	515.7826198008137	66.627	1.1683	68.516	68.15	69.318	1.8889					99	37	4	0	0	0	0.031145	6	27910	27862;27910;27949;28001;28053;28101		85.642	25.247	1	13191000			6088	1284	2976	2996	7535;7536;7537;7538;7539;7540	7536					0.035903405860153725
FPDRIMNTF	9	Unmodified	_FPDRIMNTF_					0	0	0		TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant;ENSG00000104833|ENST00000264071|TUBB4A	TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.7786132693291	2	570.778959	1139.54336	0.69023	0.00039397	-0.58958	-0.00033652	0.10065	5.745E-05	570.7785104095171	51.278	0.50965	52.672	52.407	52.917	1.3938					51	16	4	0	0	0	0.010388	3	21471	21424;21471;21512		107.1	44.527	1	8069800			6089	1479	2977	2997	7541;7542;7543	7542					-0.020825009171858255
FPDRIMNTF	9	Unmodified	_FPDRIMNTF_					0	0	0		TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant;ENSG00000104833|ENST00000264071|TUBB4A	TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.7792236208916	2	570.778959	1139.54336	0.38116	0.00021756	-0.2716	-0.00015503	0.10956	6.2534E-05	570.7788078480547	50.683	0.48743	52.658	52.425	52.912	1.9753					48	15	4	0	0	0	0.02298	4	21275	21178;21224;21275;21323		96.936	50.915	1	9733700			6090	1479	2977	2997	7544;7545;7546;7547	7546					-0.020825009171858255
FPDTPLAL	8	Unmodified	_FPDTPLAL_					0	0	0		nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3	nc|ENSG00000129351|Q12906|ILF3	nc|ENSG00000129351|Q12906|ILF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	873.4767333865166	1	873.471646	872.46437	1.9933	0.0017411	1.3123	0.0011462	3.3056	0.0028873	873.472623910146	68.713	0.86015	70.079	69.725	70.585	1.3657					62	27	3	0	0	0	0.017234	5	28766	28766;28812;28862;28903;28957		136.08	69.045	1	4226400			6091	2401	2978	2998	7548;7549;7550;7551;7552	7548					0.02303595120179125
FPDTPLAL	8	Unmodified	_FPDTPLAL_					0	0	0		nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3	nc|ENSG00000129351|Q12906|ILF3	nc|ENSG00000129351|Q12906|ILF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2403747439384	2	437.239461	872.46437	2.3071	0.0010087	-0.70556	-0.0003085	1.6015	0.00070025	437.2392062718864	68.678	0.65955	70.044	69.784	70.443	1.3657					31	20	2	0	0	0	0.82039	1	28867	28867		19.439	0	1	1152500			6092	2401	2978	2998	7553	7553					0.02303595120179125
FPDTPLAL	8	Unmodified	_FPDTPLAL_					0	0	0		nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3	nc|ENSG00000129351|Q12906|ILF3	nc|ENSG00000129351|Q12906|ILF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	873.4750854372978	1	873.471646	872.46437	2.051	0.0017914	1.094	0.00095555	3.1449	0.002747	873.4725673336592	68.2	0.83959	70.07	69.704	70.544	1.87					54	26	3	0	0	0	0.00018197	5	28587	28544;28587;28629;28681;28737		152.78	74.34	1	3683300			6093	2401	2978	2998	7554;7555;7556;7557;7558	7555					0.02303595120179125
FPDTPLAL	8	Unmodified	_FPDTPLAL_					0	0	0		nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;ENST00000587928.5_1_19:10792469-10795138:+|nuORF;nc|ENSG00000129351|Q12906-5|ILF3;nc|ENSG00000129351|Q12906-4|ILF3;nc|ENSG00000129351|Q12906-2|ILF3;nc|ENSG00000129351|Q12906-6|ILF3;nc|ENSG00000129351|Q12906-3|ILF3	nc|ENSG00000129351|Q12906|ILF3	nc|ENSG00000129351|Q12906|ILF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2398254275322	2	437.239461	872.46437	2.2695	0.00099231	-0.81145	-0.0003548	1.458	0.00063751	437.2389710763891	68.347	0.59901	70.217	69.827	70.426	1.87					26	18	2	0	0	0	0.74212	1	28686	28686		26.341	0	1	1212400			6094	2401	2978	2998	7559	7559					0.02303595120179125
FPDWREDVL	9	Unmodified	_FPDWREDVL_					0	0	0		ENSG00000075539|ENST00000358350|FRYL;FRYL|p.G1301Wfs*31|1|0.18|ENSG00000075539|chr4:48557678-48557679|-/T|frameshift_variant	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7894164919853	2	588.787838	1175.56112	3.0639	0.001804	0.54652	0.00032179	3.6105	0.0021258	588.7875978352071	61.263	0.99043	62.681	62.375	63.365	1.4177					60	31	2	0	0	0	0.18337	2	25644	25644;25692		34.932	9.5328	1	2160900			6095	934	2979	2999	7560;7561	7560					-0.019634623906767956
FPDWREDVL	9	Unmodified	_FPDWREDVL_					0	0	0		ENSG00000075539|ENST00000358350|FRYL;FRYL|p.G1301Wfs*31|1|0.18|ENSG00000075539|chr4:48557678-48557679|-/T|frameshift_variant	ENSG00000075539|ENST00000358350|FRYL	ENSG00000075539|ENST00000358350|FRYL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7883788943291	2	588.787838	1175.56112	2.9403	0.0017312	-0.019275	-1.1349E-05	2.921	0.0017199	588.7869681822684	60.827	0.89318	62.792	62.42	63.313	1.9653					52	28	2	0	0	0	0.25667	1	25448	25448		27.629	5.8822	1	1923900			6096	934	2979	2999	7562	7562					-0.019634623906767956
FPDYGKVEL	9	Unmodified	_FPDYGKVEL_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2760497927666	2	534.274032	1066.53351	2.4347	0.0013008	0.10069	5.3795E-05	2.5353	0.0013546	534.2737293695342	47.338	0.57543	48.721	48.473	49.048	1.3825					37	17	3	0	0	0	0.3091	1	19865	19865		24.991	5.552	1	1655200			6097	2711	2980	3000	7563	7563					0.0029063434908493946
FPEAIIVKP	9	Unmodified	_FPEAIIVKP_					0	0	0		ENST00000396655.6_1_12:4758292-4777674:+|nuORF;ENSG00000139180|ENST00000266544|NDUFA9	ENST00000396655.6_1_12:4758292-4777674:+|nuORF	ENST00000396655.6_1_12:4758292-4777674:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3084899783134	2	507.305136	1012.59572	2.0069	0.0010181	1.5293	0.00077584	3.5362	0.001794	507.3066002667726	46.257	0.96361	47.632	46.93	47.893	1.3751					46	30	2	0	0	0	0.093059	1	19293	19293		51.63	26.956	1	1214000			6098	2867	2981	3001	7564	7564					0.08992405488095301
FPEEIQQQI	9	Unmodified	_FPEEIQQQI_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;nc|ENSG00000157823|P59780-2|AP3S2;ENSG00000157823|ENST00000336418|AP3S2	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2890502810478	2	566.287671	1130.56079	1.4491	0.00082058	0.45561	0.00025801	1.9047	0.0010786	566.2886563417343	45.656	0.35112	47.626	47.407	47.758	1.9703					14	10	2	0	0	0	0.53525	1	19120	19120		13.906	1.3745	1	503700			6099	7327	2982	3002	7565	7565					0.0007311788949664333
FPEEIQQQI	9	Unmodified	_FPEEIQQQI_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;nc|ENSG00000157823|P59780-2|AP3S2;ENSG00000157823|ENST00000336418|AP3S2	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	566.287671	1130.56079	1.6889	0.00095642	1.1312	0.00064059	2.8201	0.001597	566.2890196702741	46.027	0.37745	47.402	47.209	47.586	1.3751	-0.11194	0.0004086	NaN	13.906	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602240			6100	7327	2982	3002							0.0007311788949664333
FPEELTQTF	9	Unmodified	_FPEELTQTF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2693969607353	2	556.268947	1110.52334	2.7992	0.0015571	-0.87653	-0.00048759	1.9227	0.0010695	556.2682538626683	60.264	1.4507	61.683	61.115	62.565	1.4196					107	46	3	0	0	0	0.037761	4	25186	25186;25235;25289;25540		78.149	47.513	1	5736100			6101	5396	2983	3003	7566;7567;7568;7569	7566					-0.027499733761487732
FPEELTQTF	9	Unmodified	_FPEELTQTF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2701293826103	2	556.268947	1110.52334	2.9473	0.0016395	-0.74438	-0.00041408	2.2029	0.0012254	556.2684022814277	59.817	1.3242	61.786	61.256	62.58	1.969					105	42	4	0	0	0	0.049839	4	25030	25030;25081;25133;25319		68.081	37.444	1	5319700			6102	5396	2983	3003	7570;7571;7572;7573	7570					-0.027499733761487732
FPEELTQTFM	10	Unmodified	_FPEELTQTFM_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.7902099490166	2	621.789189	1241.56383	2.3604	0.0014677	-0.056043	-3.4847E-05	2.3044	0.0014328	621.7889931336565	71.013	0.51227	72.354	72.117	72.629	1.3415					28	16	2	0	0	0	0.6819	1	29793	29793		19.257	9.1831	1	892970			6103	5396	2984	3004	7574	7574					-0.047293750480548624
FPEEVIATIF	10	Unmodified	_FPEEVIATIF_					0	0	0		ENSG00000186480|ENST00000340368|INSIG1;nc|ENSG00000186480|O15503-2|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3141357302666	2	583.310615	1164.60668	4.0815	0.0023808	1.0617	0.00061931	5.1432	0.0030001	583.3114150501015	90.783	0.67161	91.765	91.493	92.165	0.98157					42	20	3	0	0	0	0.44465	4	38221	38175;38221;38269;38317		30.637	14.789	1	2428000			6104	4794	2985	3005	7575;7576;7577;7578	7576					0.030957630717011853
FPEEVIATIF	10	Unmodified	_FPEEVIATIF_					0	0	0		ENSG00000186480|ENST00000340368|INSIG1;nc|ENSG00000186480|O15503-2|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3073608279228	2	583.310615	1164.60668	3.8833	0.0022652	-0.42177	-0.00024602	3.4616	0.0020192	583.3095728456638	90.339	0.54496	91.705	91.482	92.027	1.366					32	16	3	0	0	0	0.44465	3	38028	38028;38077;38129		30.637	14.789	1	1741900			6105	4794	2985	3005	7579;7580;7581	7579					0.030957630717011853
FPEGALIRL	9	Unmodified	_FPEGALIRL_					0	0	0		ENST00000522126.5_1_5:141021104-141024617:-|nuORF;nc|ENSG00000197948|Q86WN1-2|FCHSD1;ENSG00000197948|ENST00000435817|FCHSD1	ENST00000522126.5_1_5:141021104-141024617:-|nuORF	ENST00000522126.5_1_5:141021104-141024617:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3037597537041	2	508.300384	1014.58622	2.8423	0.0014448	0.1273	6.4705E-05	2.9696	0.0015095	508.30032228796824	59.423	0.58717	60.842	60.497	61.084	1.4196					25	18	2	0	0	0	0.10473	2	24891	24891;24945		47.749	0	1	1149800			6106	5032	2986	3006	7582;7583	7582					0.07950637202554844
FPEGALIRL	9	Unmodified	_FPEGALIRL_					0	0	0		ENST00000522126.5_1_5:141021104-141024617:-|nuORF;nc|ENSG00000197948|Q86WN1-2|FCHSD1;ENSG00000197948|ENST00000435817|FCHSD1	ENST00000522126.5_1_5:141021104-141024617:-|nuORF	ENST00000522126.5_1_5:141021104-141024617:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.300384	1014.58622	2.5445	0.0012934	3.3555	0.0017056	5.9	0.002999	508.30271384714155	58.91	0.37398	60.879	60.663	61.037	1.969	0.018173	0.0014968	NaN	47.749	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	790270			6107	5032	2986	3006							0.07950637202554844
FPEHIFPAL	9	Unmodified	_FPEHIFPAL_					0	0	0		ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant;ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant	ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7887451052666	2	535.78711	1069.55967	2.1456	0.0011496	0.13999	7.5004E-05	2.2856	0.0012246	535.7873093043986	66.104	1.4737	67.493	66.993	68.467	1.3888					166	47	5	0	0	0	0.028763	11	27781	27602;27651;27692;27742;27781;27820;27859;27898;27937;27976;28020		89.427	65.406	1	146700000			6108	20	2987	3007	7584;7585;7586;7587;7588;7589;7590;7591;7592;7593;7594	7588					0.027669483112276794
FPEHIFPAL	9	Unmodified	_FPEHIFPAL_					0	0	0		ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant;ENSG00000138071|ENST00000260641|ACTR2;nc|ENSG00000138071|P61160-2|ACTR2	ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant	ACTR2|p.L303Gfs*32|1|0.04|ENSG00000138071|chr2:65265066-65265067|-/TGGAGTGCAGTGGTGCAGTCTCG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7880737185478	2	535.78711	1069.55967	1.9504	0.001045	-0.30246	-0.00016205	1.6479	0.00088292	535.7870100437432	65.611	1.4512	67.52	67.095	68.546	1.9085					157	46	5	0	0	0	0.0082953	10	27545	27418;27467;27506;27545;27585;27636;27675;27714;27754;27796		109.63	78.993	1	140250000			6109	20	2987	3007	7595;7596;7597;7598;7599;7600;7601;7602;7603;7604	7598					0.027669483112276794
FPEKSLLLL	9	Unmodified	_FPEKSLLLL_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000462259.5_1_1:234527325-234536616:-|nuORF	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3283569216728	2	530.326068	1058.63758	2.2277	0.0011814	0.54641	0.00028978	2.7741	0.0014712	530.326082908306	65.956	0.81906	67.355	66.817	67.636	1.3989					46	26	2	0	0	0	0.15456	2	27607	27607;27714		38.176	7.539	1	2701000			6110	740	2988	3008	7605;7606	7605					0.11060961176644923
FPEKSLLLL	9	Unmodified	_FPEKSLLLL_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000462259.5_1_1:234527325-234536616:-|nuORF	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3278076052666	2	530.326068	1058.63758	1.9864	0.0010534	0.31969	0.00016954	2.3061	0.001223	530.3259575627627	65.42	0.71096	67.328	66.938	67.649	1.9085					49	22	3	0	0	0	0.15456	1	27413	27413		38.176	2.0485	1	2330900			6111	740	2988	3008	7607	7607					0.11060961176644923
FPEQANNNE	9	Unmodified	_FPEQANNNE_					0	0	0		nc|ENSG00000108344|O43242-2|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;ENSG00000108344|ENST00000264639|PSMD3;ENST00000580980.1_1_17:38142938-38146259:+|nuORF	nc|ENSG00000108344|O43242-2|PSMD3	nc|ENSG00000108344|O43242-2|PSMD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.3040649294853	2	531.727978	1061.4414	1.8233	0.0009695	-1.279	-0.00068009	0.54429	0.00028942	531.7269056618793	71.884	0.46856	73.225	72.998	73.467	1.3415					44	14	4	0	0	0	0.11492	1	30151	30151		13.042	2.2185	1	2248200			6112	1630	2989	3009	7608	7608					-0.08686075735249688
FPEQIAEKL	9	Unmodified	_FPEQIAEKL_					0	0	0		LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant;ENSG00000116212|ENST00000371370|LRRC42	LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant	LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7964355349541	2	537.795132	1073.57571	2.4269	0.0013052	0.20126	0.00010824	2.6282	0.0014134	537.7952390602345	41.25	0.79083	42.575	42.305	43.096	1.3254					60	24	3	0	0	0	0.029432	4	17269	17269;17327;17381;17436		88.364	38.809	1	2296900			6113	1960	2990	3010	7609;7610;7611;7612	7609					0.04186609757448423
FPEQIAEKL	9	Unmodified	_FPEQIAEKL_					0	0	0		LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant;ENSG00000116212|ENST00000371370|LRRC42	LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant	LRRC42|p.I108L|1|0.12|ENSG00000116212|chr1:53952321-53952321|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7958251833916	2	537.795132	1073.57571	2.1816	0.0011732	0.032708	1.759E-05	2.2143	0.0011908	537.7951439099098	40.884	0.72565	42.776	42.484	43.209	1.8927					54	22	3	0	0	0	0.036298	4	17092	17092;17148;17200;17292		79.427	33.727	1	2218400			6114	1960	2990	3010	7613;7614;7615;7616	7613					0.04186609757448423
FPERIYRKLPW	11	Unmodified	_FPERIYRKLPW_					0	0	0		chr1:228131234-228145511|250|23.0|0.88|4.71|+|2|TE_info:ERV24_Prim-int,ERV24_Prim-int_dup46,ERV1,LTR,donor,+,228130971,228131234|None,GUK1|2	chr1:228131234-228145511|250|23.0|0.88|4.71|+|2|TE_info:ERV24_Prim-int,ERV24_Prim-int_dup46,ERV1,LTR,donor,+,228130971,228131234|None,GUK1|2	chr1:228131234-228145511|250|23.0|0.88|4.71|+|2|TE_info:ERV24_Prim-int,ERV24_Prim-int_dup46,ERV1,LTR,donor,+,228130971,228131234|None,GUK1|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2869140505791	3	502.285628	1503.83505	2.2641	0.0011372	-0.55727	-0.00027991	1.7068	0.0008573	502.2851767324735	46.369	0.54259	46.698	46.479	47.022	0.32899					51	18	4	0	0	0	1.0393	1	19481	19481		0.094841	0	1	2684000			6115	170	2991	3011	7617	7617					0.10328980439271618
FPFDVAVKF	9	Unmodified	_FPFDVAVKF_					0	0	0		nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;ENSG00000168538|ENST00000334690|TRAPPC11;nc|ENSG00000168538|Q7Z392-2|TRAPPC11	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.7408325076103	2	535.289485	1068.56442	3.6139	0.0019345	-0.1055	-5.6471E-05	3.5084	0.001878	535.2896342943073	73.414	0.68762	74.732	74.623	75.31	1.318					39	21	2	0	0	0	0.092938	1	30782	30782		27.629	19.719	1	1534400			6116	4039	2992	3012	7618	7618					0.032878324539979076
FPFDVAVKF	9	Unmodified	_FPFDVAVKF_					0	0	0		nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;ENSG00000168538|ENST00000334690|TRAPPC11;nc|ENSG00000168538|Q7Z392-2|TRAPPC11	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	535.7399169802666	2	535.289485	1068.56442	2.8356	0.0015179	0.22349	0.00011963	3.0591	0.0016375	535.2905260844014	73.001	0.75644	74.811	74.512	75.268	1.8101					31	23	2	0	0	0	0.098208	1	30553	30553		24.021	18.79	1	1474200			6117	4039	2992	3012	7619	7619					0.032878324539979076
FPFIYIPI	8	Unmodified	_FPFIYIPI_					0	0	0			REV__tr|A0A553SFL1|A0A553SFL1_NIACIDUF2268domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09115PE=4SV=1	REV__tr|A0A553SFL1|A0A553SFL1_NIACIDUF2268domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2921325564384	2	505.291497	1008.56844	2.4269	0.0012263	-1.5797	-0.00079823	0.84712	0.00042804	505.29025902812424	81.37	0.57845	81.661	81.307	81.885	0.29056					43	18	3	0	0	0	0.88958	1	34064	34064		2.8892	0.58649	1	8788400	+		6118	14708	2993	3013	7620	7620					0.06449921947694293
FPFLEQRSL	9	Unmodified	_FPFLEQRSL_					0	0	0			REV__NID1|p.H677Vfs*128|1|0.3|ENSG00000116962|chr1:236024169-236024170|-/AC|frameshift_variant	REV__NID1|p.H677Vfs*128|1|0.3|ENSG00000116962|chr1:236024169-236024170|-/AC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8121215701103	2	568.808574	1135.60259	1.8092	0.0010291	0.49594	0.00028209	2.3052	0.0013112	568.8083772213287	65.502	0.76579	67.41	66.969	67.735	1.9085					61	24	4	0	0	0	0.46905	1	27393	27393		16.942	0	1	18839000	+		6119	9486	2994	3014	7621	7621					0.04021718368676375
FPFQDIEL	8	Unmodified	_FPFQDIEL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7563354372978	2	504.755475	1007.4964	3.5278	0.0017807	-1.3477	-0.00068028	2.18	0.0011004	504.75482417709037	81.337	0.65179	82.57	82.284	82.936	1.2332					61	20	4	0	0	0	0.12297	3	34195	34091;34195;34253		89.427	30.748	1	7494600			6120	3064	2995	3015	7622;7623;7624	7623					-0.007050371966784041
FPFQDIEL	8	Unmodified	_FPFQDIEL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1008.505786120892	1	1008.50367	1007.4964	3.3097	0.0033379	-0.39818	-0.00040157	2.9116	0.0029363	1008.5032281098374	81.345	0.55754	82.579	82.378	82.936	1.2332					40	17	3	0	0	0	0.30755	3	34170	34119;34170;34226		71.134	46.021	1	2907300			6121	3064	2995	3015	7625;7626;7627	7626					-0.007050371966784041
FPFQDIEL	8	Unmodified	_FPFQDIEL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7566100955009	2	504.755475	1007.4964	2.4803	0.0012519	-0.21705	-0.00010956	2.2632	0.0011424	504.7554128037206	80.962	0.58901	82.658	82.364	82.953	1.6959					52	18	4	0	0	0	0.23051	3	34010	33907;33959;34010		77.984	31.3	1	6174100			6122	3064	2995	3015	7628;7629;7630	7630					-0.007050371966784041
FPFQDIEL	8	Unmodified	_FPFQDIEL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.506091296673	1	1008.50367	1007.4964	2.742	0.0027653	0.43095	0.00043462	3.173	0.0031999	1008.5031208464966	81.003	0.4663	82.699	82.425	82.892	1.6959					33	14	3	0	0	0	0.43377	1	33932	33932		52.268	6.5687	1	2101100			6123	3064	2995	3015	7631	7631					-0.007050371966784041
FPFSDKLGEL	10	Unmodified	_FPFSDKLGEL_					0	0	0		ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8013793826103	2	576.800414	1151.58628	2.3022	0.0013279	0.33514	0.00019331	2.6374	0.0015212	576.8007324368589	63.408	1.0016	64.821	64.533	65.534	1.4134					85	31	3	0	0	0	0.055952	7	26616	26518;26562;26616;26668;26722;26775;26828		91.085	27.124	1	5408600			6124	1815	2996	3016	7632;7633;7634;7635;7636;7637;7638	7634					0.016545924119100164
FPFSDKLGEL	10	Unmodified	_FPFSDKLGEL_					0	0	0		ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8013793826103	2	576.800414	1151.58628	2.3909	0.0013791	-0.39095	-0.0002255	1.9999	0.0011536	576.8004537361268	62.917	1.004	64.861	64.501	65.505	1.9444					89	31	4	0	0	0	0.045734	6	26354	26303;26354;26406;26463;26514;26565		80.676	25.173	1	5261800			6125	1815	2996	3016	7639;7640;7641;7642;7643;7644	7640					0.016545924119100164
FPFSTAVKL	9	Unmodified	_FPFSTAVKL_					0	0	0		ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	ENSG00000146250|ENST00000369700|PRSS35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2914916872978	2	505.289485	1008.56442	2.6985	0.0013635	-4.4036	-0.0022251	-1.7052	-0.0008616	505.78776003596954	59.258	0.51728	60.678	60.409	60.926	1.4196					34	16	3	0	0	0	0.053939	1	24887	24887		66.457	28.483	1	3417900			6126	3142	2997	3017	7645	7645					0.060478324539985806
FPFVLHRRLI	10	Unmodified	_FPFVLHRRLI_					0	0	0			REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF	REV__ENST00000430298.6_1_19:12222347-12224207:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	649.3981811404228	2	649.398225	1296.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.985	1	95.726	95.226	96.226	0.74124								0	0	0	0.66155	1	39959	39959		1.8442	0.36234	1		+		6127	13020	2998	3018	7646	7646					0.14537647447286872
FPFYTQDI	8	Unmodified	_FPFYTQDI_					0	0	0			REV__ENST00000310301.8_1_7:38785179-38791834:-|nuORF	REV__ENST00000310301.8_1_7:38785179-38791834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7479736208916	2	515.74765	1029.48075	3.54	0.0018257	-3.2951	-0.0016994	0.24492	0.00012632	515.7459899808168	81.315	0.49491	82.548	82.348	82.842	1.2332					26	15	2	0	0	0	0.69649	1	34136	34136		30.637	6.4266	1	1061900	+		6128	12358	2999	3019	7647	7647					-0.03281323713713391
FPFYTVSIP	9	Unmodified	_FPFYTVSIP_					0	0	0			REV__nc|ENSG00000135902|Q07001-2|CHRND	REV__nc|ENSG00000135902|Q07001-2|CHRND	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	535.3262817263603	2	535.781493	1069.54843	1.6726	0.00089613	3.368	0.0018045	5.0406	0.0027007	535.7826027266843	68.75	0.15223	70.602	70.527	70.679	1.853					7	4	2	0	0	0	0.116	1	28833	28833		5.2307	0.47466	1	870920	+		6129	9958	3000	3020	7648	7648					0.016441262170928894
FPGLASEL	8	Unmodified	_FPGLASEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	833.4442016482353	1	833.440346	832.433069	2.7667	0.0023059	1.0306	0.00085895	3.7973	0.0031649	833.4411450722808	61.341	0.58141	62.759	62.407	62.988	1.4177					30	18	2	0	0	0	0.11104	3	25747	25646;25694;25747		90.836	23.329	1	1958400			6130	1573	3001	3021	7649;7650;7651	7651					0.01015022086096451
FPGLASEL	8	Unmodified	_FPGLASEL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	833.4421874880791	1	833.440346	832.433069	2.7636	0.0023033	0.5841	0.00048681	3.3477	0.0027901	833.4407051871691	60.84	0.52251	62.805	62.482	63.004	1.9653					28	16	2	0	0	0	0.17786	2	25539	25489;25539		82.939	37.996	1	1660200			6131	1573	3001	3021	7652;7653	7653					0.01015022086096451
FPHELEVPAL	10	Unmodified	_FPHELEVPAL_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6;nc|ENSG00000124587|Q13608-2|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3104736208916	2	576.308406	1150.60226	2.6358	0.0015191	0.23505	0.00013546	2.8709	0.0016545	576.3089696498971	60.241	0.66469	61.661	61.206	61.871	1.4196					50	21	3	0	0	0	0.04351	3	25262	25162;25212;25262		81.613	47.211	1	6088000			6132	2235	3002	3022	7654;7655;7656	7656					0.032982986488150345
FPHELEVPAL	10	Unmodified	_FPHELEVPAL_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6;nc|ENSG00000124587|Q13608-2|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3106567263603	2	576.308406	1150.60226	2.9341	0.001691	0.53785	0.00030997	3.472	0.0020009	576.3091224028178	59.78	0.88731	61.749	61.315	62.202	1.969					55	28	3	0	0	0	0.09859	3	25067	24967;25015;25067		64.236	28.908	1	5537900			6133	2235	3002	3022	7657;7658;7659	7659					0.032982986488150345
FPHGGGFVL	9	Unmodified	_FPHGGGFVL_					0	0	0		ENST00000604175.5_1_9:90586022-90589430:-|nuORF;ENST00000603475.1_1_9:90586022-90589145:-|nuORF;ENST00000459720.5_1_9:90585689-90589466:-|nuORF;nc|ENSG00000156345|Q8IZL9-2|CDK20;nc|ENSG00000156345|Q8IZL9-3|CDK20;nc|ENSG00000156345|Q8IZL9-5|CDK20;nc|ENSG00000156345|Q8IZL9-4|CDK20;ENSG00000156345|ENST00000325303|CDK20	ENST00000604175.5_1_9:90586022-90589430:-|nuORF	ENST00000604175.5_1_9:90586022-90589430:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7459594607353	2	465.745245	929.475937	2.2124	0.0010304	-0.30547	-0.00014227	1.9069	0.00088813	465.7449026489866	47.793	1.1208	49.175	48.922	50.043	1.3825					70	35	3	0	0	0	0.24585	4	19982	19982;20032;20085;20134		28.173	15.642	1	3069500			6134	3445	3003	3023	7660;7661;7662;7663	7660					0.008378369341926373
FPHGGGFVL	9	Unmodified	_FPHGGGFVL_					0	0	0		ENST00000604175.5_1_9:90586022-90589430:-|nuORF;ENST00000603475.1_1_9:90586022-90589145:-|nuORF;ENST00000459720.5_1_9:90585689-90589466:-|nuORF;nc|ENSG00000156345|Q8IZL9-2|CDK20;nc|ENSG00000156345|Q8IZL9-3|CDK20;nc|ENSG00000156345|Q8IZL9-5|CDK20;nc|ENSG00000156345|Q8IZL9-4|CDK20;ENSG00000156345|ENST00000325303|CDK20	ENST00000604175.5_1_9:90586022-90589430:-|nuORF	ENST00000604175.5_1_9:90586022-90589430:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7461730837822	2	465.745245	929.475937	2.8938	0.0013478	-0.76051	-0.0003542	2.1333	0.00099356	465.744684881686	47.383	0.95774	49.359	49.031	49.989	1.976					66	30	3	0	0	0	0.24585	5	19875	19777;19824;19875;19926;19997		28.173	16.533	1	3443700			6135	3445	3003	3023	7664;7665;7666;7667;7668	7666					0.008378369341926373
FPHIGRVNEIL	11	Unmodified	_FPHIGRVNEIL_					0	0	0			REV__ENST00000602760.1_1_2:114647100-114647259:-|nuORF	REV__ENST00000602760.1_1_2:114647100-114647259:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	432.9006835818291	3	432.247062	1293.71936	2.4374	0.0010535	-3.747	-0.0016196	-1.3096	-0.00056607	432.24513940729025	39.845	0.2782	41.155	40.991	41.269	1.3102					15	8	2	0	0	0	0.14606	1	16716	16716		5.4027	0.35519	1	1651200	+		6136	14123	3004	3024	7669	7669					0.08424456588454632
FPHISKKVLL	10	Unmodified	_FPHISKKVLL_					0	0	0		ENSG00000010219|ENST00000543431|DYRK4;nc|ENSG00000010219|Q9NR20-3|DYRK4;nc|ENSG00000010219|Q9NR20-4|DYRK4;ENST00000539309.5_1_12:4677127-4699979:+|nuORF	ENSG00000010219|ENST00000543431|DYRK4	ENSG00000010219|ENST00000543431|DYRK4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	394.5575134158134	3	394.585015	1180.73321	-0.13336	-5.262E-05	-2.4582	-0.00096998	-2.5916	-0.0010226	394.5840306110296	37.067	0.42736	37.067	36.679	37.106	0					21	19	2	0	0	0	0.12545	1	15483	15483		4.1895	1.1943	1	1209300			6137	546	3005	3025	7670	7670					0.15007734087521385
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3077270388603	2	564.305144	1126.59573	2.4397	0.0013767	-0.98655	-0.00055671	1.4531	0.00082	564.3038526052605	45.239	0.45166	46.604	46.274	46.725	1.3653					23	13	3	0	0	0	0.16939	1	18926	18926		36.506	8.333	1	1759900			6138	2999	3006	3026	7671	7671					0.03750082216447481
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.5398437380791	3	376.539188	1126.59573	1.5305	0.00057629	-0.21097	-7.9439E-05	1.3195	0.00049685	376.5392336215046	45.246	0.67469	46.612	46.18	46.855	1.3653					57	20	5	0	0	0	0.15635	2	18937	18937;18987		34.932	18.366	1	8766100			6139	2999	3006	3026	7672;7673	7672					0.03750082216447481
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.5401489138603	3	376.539188	1126.59573	0.9531	0.00035888	1.5059	0.00056704	2.459	0.00092592	376.5397355448535	45.849	0.87854	47.225	46.864	47.743	1.3751					49	27	2	0	0	0	0.61249	2	19202	19146;19202		10.8	0	1	1664800			6140	2999	3006	3026	7674;7675	7675					0.03750082216447481
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.5398437380791	3	376.539188	1126.59573	1.7494	0.0006587	-0.4508	-0.00016975	1.2986	0.00048896	376.53915278548027	44.633	0.76593	46.593	46.162	46.928	1.9596					61	23	5	0	0	0	0.37357	2	18709	18660;18709		20.415	6.7997	1	8175000			6141	2999	3006	3026	7676;7677	7677					0.03750082216447481
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3049804568291	2	564.305144	1126.59573	2.0707	0.0011685	1.6873	0.00095213	3.7579	0.0021206	564.306913642128	44.621	0.5741	46.581	46.193	46.767	1.9596					32	17	3	0	0	0	0.16939	2	18739	18686;18739		36.506	8.9694	1	1418700			6142	2999	3006	3026	7678;7679	7679					0.03750082216447481
FPHMRDIVI	9	Unmodified	_FPHMRDIVI_					0	0	0		ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.5392639040947	3	376.539188	1126.59573	1.3397	0.00050446	0.84476	0.00031809	2.1845	0.00082255	376.53946860784595	45.3	0.91516	47.26	46.863	47.779	1.9596					57	28	3	0	0	0	0.71526	2	18946	18946;19001		4.1895	0.60244	1	1247000			6143	2999	3006	3026	7680;7681	7680					0.03750082216447481
FPHSEITTL	9	Unmodified	_FPHSEITTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7703735232353	2	522.771657	1043.52876	0.45209	0.00023634	-1.2021	-0.00062843	-0.75002	-0.00039209	522.7707874532848	37.07	0.18267	38.354	38.273	38.456	1.284					20	13	2	0	0	0	0.03795	1	15566	15566		77.984	10.64	1	4470700			6144	4569	3007	3027	7682	7682					0.008737502063240754
FPHSEITTL	9	Unmodified	_FPHSEITTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7708007693291	2	522.771657	1043.52876	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.431	1	38.248	37.748	38.748	1.8176								0	0	0	0.0056841	1	15280	15280		97.075	42.301	1				6145	4569	3007	3027	7683	7683					0.008737502063240754
FPHSSYSVYI	10	Unmodified	_FPHSSYSVYI_					0	0	0		PCDHGA7|p.L604Ifs*113|1|0.17|ENSG00000253537|chr5:141384708-141384709|-/ATAGACGTGGAAATAATAGATATTAATGACAA|frameshift_variant;nc|ENSG00000253537|Q9Y5G6-2|PCDHGA7;ENSG00000253537|ENST00000518325|PCDHGA7	PCDHGA7|p.L604Ifs*113|1|0.17|ENSG00000253537|chr5:141384708-141384709|-/ATAGACGTGGAAATAATAGATATTAATGACAA|frameshift_variant	PCDHGA7|p.L604Ifs*113|1|0.17|ENSG00000253537|chr5:141384708-141384709|-/ATAGACGTGGAAATAATAGATATTAATGACAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.2909423708916	2	600.290214	1198.56587	2.1415	0.0012855	0.93311	0.00056014	3.0747	0.0018457	600.2903108775362	49.588	0.36963	50.979	50.765	51.135	1.3911					14	11	2	0	0	0	0.85124	1	20751	20751		6.7232	0	1	1067200			6146	5386	3008	3028	7684	7684					-0.025465782478931942
FPIDGAGEIRQ	11	Unmodified	_FPIDGAGEIRQ_					0	0	0			REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	601.8162719607353	2	601.811845	1201.60914	0.66114	0.00039788	1.5234	0.00091677	2.1845	0.0013147	601.8119733960305	51.158	0.42684	52.552	52.346	52.773	1.3938					20	13	2	0	0	0	0.14606	1	21363	21363		13.906	5.1606	1	1378700	+		6147	14764	3009	3029	7685	7685					0.016396115293900948
FPIIINETL	9	Unmodified	_FPIIINETL_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3105346560478	2	530.307875	1058.6012	5.8791	0.0031177	-2.1524	-0.0011414	3.7267	0.0019763	530.3076408698079	88.767	0.90277	89.823	89.53	90.433	1.0562					43	27	2	0	0	0	0.41943	1	37430	37430		19.439	2.3524	1	3007200	+		6148	8642	3010	3030	7686	7686					0.07424084279887211
FPIIINETL	9	Unmodified	_FPIIINETL_					0	0	0			REV__ENSG00000057294|ENST00000340811|PKP2	REV__ENSG00000057294|ENST00000340811|PKP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3098632693291	2	530.307875	1058.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.343	1	89.79	89.29	90.29	1.4467								0	0	0	0.29162	1	37233	37233		19.439	1.304	1		+		6149	8642	3010	3030	7687	7687					0.07424084279887211
FPIIPVGQR	9	Unmodified	_FPIIPVGQR_					0	0	0			REV__ENST00000568164.1_1_16:75148885-75149486:-|nuORF	REV__ENST00000568164.1_1_16:75148885-75149486:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8744079470634	3	342.874677	1025.6022	0.35085	0.0001203	0.19064	6.5364E-05	0.54149	0.00018566	342.8746446308779	32.719	0.35339	34.544	34.303	34.656	1.8246					47	17	4	0	0	0	0.76103	2	13748	13673;13748		4.897	1.0166	1	11493000	+		6150	10839	3011	3031	7688;7689	7689					0.09042343439477918
FPIIVLMLLI	10	Unmodified	_FPIIVLMLLI_					0	0	0			REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3812133669853	2	586.379789	1170.74502	3.2346	0.0018967	-3.1749	-0.0018617	0.059722	3.502E-05	586.3774877476194	93.73	0.58926	95.007	94.736	95.326	1.277					37	18	3	0	0	0	0.56346	1	39416	39416		24.674	4.2203	1	1467900	+		6151	15717	3012	3032	7690	7690					0.16648214786505378
FPIIVLMLLI	10	Unmodified	_FPIIVLMLLI_					0	0	0			REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	586.379789	1170.74502	2.5883	0.0015177	-0.56027	-0.00032853	2.028	0.0011892	586.8801910304538	95.081	0.25169	95.204	95.113	95.364	0.12331	0.15524	0.0029915	NaN	24.674	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355150	+		6152	15717	3012	3032							0.16648214786505378
FPIIVLMLLI	10	Unmodified	_FPIIVLMLLI_					0	0	0			REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	REV__tr|A0A7D6ZTP0|A0A7D6ZTP0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02335PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	586.379789	1170.74502	3.2346	0.0018967	-3.1749	-0.0018617	0.059722	3.502E-05	586.3774877476194	93.73	0.58926	95.007	94.736	95.326	1.277	-0.041666	-7.4823E-05	NaN	24.674	37	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1467900	+		6153	15717	3012	3032							0.16648214786505378
FPISEETIKL	10	Unmodified	_FPISEETIKL_					0	0	0		DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant;nc|ENSG00000165732|Q9NR30-2|DDX21;ENSG00000107625|ENST00000373585|DDX50;ENSG00000165732|ENST00000354185|DDX21;ENST00000483593.5_1_10:70666544-70673107:+|nuORF;DDX21|p.Q452Pfs*6|1|0.1|ENSG00000165732|chr10:68970317-68970326|CCAGGAGCTG/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	DDX21|p.V637*|1|0.26|ENSG00000165732|chr10:68978848-68978848|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8283569216728	2	588.829172	1175.64379	1.1839	0.00069711	-1.6064	-0.00094588	-0.42249	-0.00024878	588.8276947858914	56.186	0.30749	58.155	57.933	58.241	1.9684					15	9	2	0	0	0	0.16394	1	23525	23525		53.404	24.322	1	856190			6154	397	3013	3033	7691	7691					0.06299434617471888
FPISVYIEM	9	Unmodified	_FPISVYIEM_					0	0	0			REV__ENST00000520170.1_1_6:114281018-114292096:-|nuORF	REV__ENST00000520170.1_1_6:114281018-114292096:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2199584841728	2	549.780636	1097.54672	3.8718	0.0021286	0.45787	0.00025173	4.3297	0.0023804	549.7813009705387	90.374	0.54653	91.74	91.513	92.06	1.366					32	16	3	0	0	0	0.116	1	38113	38113		5.2307	2.9279	1	858920	+		6155	13623	3014	3034	7692	7692					0.001847491368152987
FPKAEHGL	8	Unmodified	_FPKAEHGL_					0	0	0		ENST00000280871.8_1_12:40151546-40151714:-|nuORF	ENST00000280871.8_1_12:40151546-40151714:-|nuORF	ENST00000280871.8_1_12:40151546-40151714:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	898.4812499880791	1	898.478128	897.470852	0.91212	0.00081952	1.284	0.0011536	2.1961	0.0019731	898.479326014735	58.132	0.31621	60.101	59.962	60.279	1.969					14	9	2	0	0	0	0.87935	1	24398	24398		9.3474	1.4373	1	1303700			6156	5698	3015	3035	7693	7693					0.018015330715684286
FPKRGILRR	9	Unmodified	_FPKRGILRR_					0	0	0		ENST00000578237.5_1_17:15555163-15586188:-|nuORF	ENST00000578237.5_1_17:15555163-15586188:-|nuORF	ENST00000578237.5_1_17:15555163-15586188:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	382.2226135134697	3	381.580487	1141.71963	0.67286	0.00025675	-0.80045	-0.00030544	-0.12759	-4.8687E-05	381.57998737547024	38.079	0.46127	39.899	39.67	40.131	1.8202					16	14	2	0	0	0	0.11891	1	15959	15959		2.9952	0	1	762230			6157	7420	3016	3036	7694	7694					0.1544392109894943
FPLATESNIL	10	Unmodified	_FPLATESNIL_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;nc|ENSG00000070718|P53677-2|AP3M2;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8060180544853	2	552.800414	1103.58628	2.0468	0.0011315	1.9516	0.0010788	3.9983	0.0022103	552.801407186996	68.34	0.70576	69.718	69.334	70.04	1.3778					44	22	2	0	0	0	0.5476	1	28624	28624		25.399	0	1	1689300			6158	4724;858	3017	3037	7695	7695					0.03862592411928745
FPLATESNIL	10	Unmodified	_FPLATESNIL_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;nc|ENSG00000070718|P53677-2|AP3M2;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.800414	1103.58628	1.6104	0.00089023	4.647	0.0025689	6.2574	0.0034591	552.8024149471822	67.624	0.34174	69.494	69.238	69.58	1.87	-0.1116	0.0019096	NaN	25.399	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1201100			6159	4724;858	3017	3037							0.03862592411928745
FPLAVLQLRVK	11	Unmodified	_FPLAVLQLRVK_					0	0	0		nc|ENSG00000127329|P23467-2|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	321.9805480837822	4	321.710408	1282.81253	0.38055	0.00012243	-0.51954	-0.00016714	-0.13899	-4.4714E-05	321.71028131388147	54.161	0.67323	55.566	55.291	55.964	1.4048					34	21	2	0	0	0	0.14606	1	22833	22833		0.094841	0.094841	1	2046000			6160	7864	3018	3038	7696	7696					0.18243381041634166
FPLAVLQLRVK	11	Unmodified	_FPLAVLQLRVK_					0	0	0		nc|ENSG00000127329|P23467-2|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	321.710408	1282.81253	0.56166	0.00018069	-3.1758	-0.0010217	-2.6142	-0.000841	321.7094546077419	53.852	0.56426	55.821	55.533	56.097	1.9697	0.12758	-0.0021493	NaN	0.094841	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2472900			6161	7864	3018	3038							0.18243381041634166
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	339.2092162966728	4	339.209304	1352.80811	-0.043942	-1.4906E-05	-0.87044	-0.00029526	-0.91438	-0.00031017	339.20859601434495	38.026	0.6009	39.31	38.987	39.588	1.284					47	20	3	0	0	0	1.0362	1	15997	15997		1.3296	0.11481	1	2908800	+		6162	11377	3019	3039	7697	7697					0.14581916618749347
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	339.209304	1352.80811	1.1093	0.00037629	-1.3926	-0.00047238	-0.28327	-9.6086E-05	339.2088423586939	38.931	0.45428	39.24	39.091	39.545	0.30857	-0.042808	-0.00027464	NaN	1.3296	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	554840	+		6163	11377	3019	3039							0.14581916618749347
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	339.209304	1352.80811	-0.043942	-1.4906E-05	-0.87044	-0.00029526	-0.91438	-0.00031017	339.20859601434495	38.026	0.6009	39.31	38.987	39.588	1.284	0.027492	0.00043384	NaN	1.3296	47	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2908800	+		6164	11377	3019	3039							0.14581916618749347
FPLGRWVLPRL	11	Unmodified	_FPLGRWVLPRL_					0	0	0			REV__ENSG00000183134|ENST00000332539|PTGDR2	REV__ENSG00000183134|ENST00000332539|PTGDR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	339.209304	1352.80811	0.24751	8.3958E-05	-1.3496	-0.00045781	-1.1021	-0.00037385	339.208304455372	37.478	0.87466	39.298	38.826	39.701	1.8202	0.015316	-0.00021635	NaN	1.3296	60	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2311800	+		6165	11377	3019	3039							0.14581916618749347
FPLIPKND	8	Unmodified	_FPLIPKND_					0	0	0		nc|ENSG00000135686|Q8N4N3-2|KLHL36;ENSG00000135686|ENST00000564996|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1788513064384	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.371	1	91.371	90.871	91.871	0								0	0	0	1.0178	1	38187	38187		0.45834	0	1				6166	2681	3020	3040	7698	7698					0.043909729028428046
FPLLPGWGL	9	Unmodified	_FPLLPGWGL_					0	0	0			REV__ENST00000455508.1_1_21:32639260-32649101:-|nuORF	REV__ENST00000455508.1_1_21:32639260-32649101:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2885925173759	2	500.286746	998.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.305	1	44.659	44.159	45.159	1.3536								0	0	0	0.42693	1	18152	18152		5.2307	0.47466	1		+		6167	13160	3021	3041	7699	7699					0.059601536621812556
FPLLPSLLQG	10	Unmodified	_FPLLPSLLQG_					0	0	0		ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	ENST00000398022.6_1_20:30753698-30754259:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2177307009697	3	362.21822	1083.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.008	1	86.008	85.508	86.508	0								0	0	0	0.66222	1	35836	35836		0.69767	0	1				6168	6319	3022	3042	7700	7700					0.09436077033842594
FPLQFIFLIQ	10	Unmodified	_FPLQFIFLIQ_					0	0	0			REV__ENSG00000185926|ENST00000328188|OR4C46	REV__ENSG00000185926|ENST00000328188|OR4C46	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3710204958916	2	633.368267	1264.72198	2.2419	0.00142	1.567	0.00099252	3.809	0.0024125	633.3689334927251	77.176	0.53862	78.457	78.124	78.663	1.2809					25	16	2	0	0	0	0.87699	1	32329	32329		3.9444	0.3479	1	994870	+		6169	11481	3023	3043	7701	7701					0.10020911993365189
FPLRYKRPK	9	Unmodified	_FPLRYKRPK_					0	0	0			REV__ENST00000330843.8_1_8:37730107-37730260:-|nuORF	REV__ENST00000330843.8_1_8:37730107-37730260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.2490417361259	3	402.248625	1203.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.52	1	105.52	105.02	106.02	0								0	0	0	0.42693	1	44814	44814		0.26902	0	1		+		6170	12445	3024	3044	7702	7702					0.13033385521816854
FPLSGHLLL	9	Unmodified	_FPLSGHLLL_					0	0	0		ENST00000606893.5_1_6:110533295-110551331:+|nuORF;ENSG00000168438|ENST00000307731|CDC40	ENST00000606893.5_1_6:110533295-110551331:+|nuORF	ENST00000606893.5_1_6:110533295-110551331:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	498.2580749392509	2	498.797478	995.580402	1.7677	0.00088173	-1.4023	-0.00069945	0.36545	0.00018228	498.79642131077367	67.064	0.43542	68.453	68.121	68.557	1.3888					20	13	2	0	0	0	0.10591	1	28051	28051		18.135	0	1	584120			6171	4035	3025	3045	7703	7703					0.08243538690908281
FPLTLDLNLP	10	Unmodified	_FPLTLDLNLP_					0	0	0			REV__ENST00000468403.1_1_1:153751697-153752222:+|nuORF	REV__ENST00000468403.1_1_1:153751697-153752222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8260375857353	2	571.826432	1141.63831	3.2901	0.0018814	-3.3182	-0.0018974	-0.02809	-1.6063E-05	571.8247856367254	99.604	0.082504	99.829	99.789	99.872	0.22545					4	2	2	0	0	0	0.85604	1	41911	41911		6.2058	0	1	719140	+		6172	13257	3026	3046	7704	7704					0.07315755825652559
FPMEIRQYL	9	Unmodified	_FPMEIRQYL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1;chr2:190977025-191009876|406|11.71|0.39|4.9|-|ENST00000423282|STAT1,STAT1;STAT1|p.P251Afs*28|1|0.05|ENSG00000115415|chr2:190997890-190997891|-/C|frameshift_variant	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8117553591728	2	598.810259	1195.60597	2.9706	0.0017788	-0.8363	-0.00050078	2.1343	0.001278	598.8096854869343	61.743	0.43904	63.161	62.957	63.396	1.4177					24	13	2	0	0	0	0.10473	2	25880	25880;25929		47.749	26.002	1	1567300			6173	1917	3027	3047	7705;7706	7705					0.015986451510343613
FPMEIRQYL	9	Unmodified	_FPMEIRQYL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1;chr2:190977025-191009876|406|11.71|0.39|4.9|-|ENST00000423282|STAT1,STAT1;STAT1|p.P251Afs*28|1|0.05|ENSG00000115415|chr2:190997890-190997891|-/C|frameshift_variant	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.8120605349541	2	598.810259	1195.60597	2.3145	0.0013859	0.82296	0.00049279	3.1374	0.0018787	598.8109824338899	61.211	0.40433	63.176	63.004	63.409	1.9653					24	12	3	0	0	0	0.1109	1	25694	25694		45.7	29.852	1	1676600			6174	1917	3027	3047	7707	7707					0.015986451510343613
FPNAIEHTL	9	Unmodified	_FPNAIEHTL_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1;ENST00000490869.1_1_X:47063082-47065999:+|nuORF	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2744018435478	2	521.271824	1040.5291	2.1434	0.0011173	-0.74401	-0.00038783	1.3994	0.00072946	521.2714538623057	38.864	0.48747	40.16	39.895	40.382	1.2961					27	15	2	0	0	0	0.029093	1	16347	16347		88.904	62.562	1	1252200			6175	2474	3028	3048	7708	7708					0.010451699261921021
FPNAIEHTL	9	Unmodified	_FPNAIEHTL_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1;ENST00000490869.1_1_X:47063082-47065999:+|nuORF	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2732421755791	2	521.271824	1040.5291	0.99308	0.00051767	0.60752	0.00031668	1.6006	0.00083435	521.2722108864278	38.321	0.618	40.158	39.717	40.335	1.8366					35	19	3	0	0	0	0.029061	2	16088	16035;16088		88.954	58.729	1	1188700			6176	2474	3028	3048	7709;7710	7710					0.010451699261921021
FPNAIEHTLQW	11	Unmodified	_FPNAIEHTLQW_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	678.3436767458916	2	678.340769	1354.66699	2.5873	0.0017551	1.5542	0.0010543	4.1415	0.0028094	678.3414823983775	59.934	0.51673	61.903	61.495	62.012	1.969					21	16	2	0	0	0	0.15597	1	25149	25149		45.74	27.367	1	1188400			6177	2474	3029	3049	7711	7711					0.0038387345480259683
FPNAIEHTLQW	11	Unmodified	_FPNAIEHTLQW_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	678.340769	1354.66699	2.6188	0.0017764	1.2881	0.0008738	3.9069	0.0026502	678.341187390714	60.398	0.4881	61.817	61.507	61.995	1.4196	-0.042563	-0.00026333	NaN	45.74	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	958970			6178	2474	3029	3049							0.0038387345480259683
FPNASLIGL	9	Unmodified	_FPNASLIGL_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	466.1718322634697	2	466.26601	930.517468	3.6064	0.0016815	-0.89929	-0.00041931	2.7071	0.0012622	466.2654970202953	74.143	0.792	75.461	75.125	75.917	1.318					50	25	3	0	0	0	0.10306	1	31054	31054		19.439	6.9074	1	1474400			6179	472	3030	3050	7712	7712					0.049429729028588554
FPNETIIEL	9	Unmodified	_FPNETIIEL_					0	0	0			REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2892333865166	2	538.28714	1074.55973	2.7126	0.0014601	1.5731	0.00084679	4.2857	0.0023069	538.2878288047071	78.115	0.75365	79.396	79.108	79.862	1.2809					46	24	3	0	0	0	0.073578	1	32802	32802		58.679	0.95683	1	9993700	+		6180	14878	3031	3051	7713	7713					0.02542903520566142
FPNETIIEL	9	Unmodified	_FPNETIIEL_					0	0	0			REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2890502810478	2	538.28714	1074.55973	1.4794	0.00079636	1.1423	0.00061488	2.6217	0.0014112	538.2879993866553	77.657	0.51616	79.409	79.2	79.716	1.7514					37	16	3	0	0	0	0.073578	1	32608	32608		58.679	0.95683	1	8644300	+		6181	14878	3031	3051	7714	7714					0.02542903520566142
FPNETIIEL	9	Unmodified	_FPNETIIEL_					0	0	0			REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	538.28714	1074.55973	1.6494	0.00088786	3.3377	0.0017966	4.9871	0.0026845	538.2882749040607	79.572	0.2809	79.572	79.422	79.703	0	0.11337	0.0018407	NaN	58.679	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	861440	+		6182	14878	3031	3051							0.02542903520566142
FPNETIIEL	9	Unmodified	_FPNETIIEL_					0	0	0			REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	538.28714	1074.55973	2.7126	0.0014601	1.5731	0.00084679	4.2857	0.0023069	538.2878288047071	78.115	0.75365	79.396	79.108	79.862	1.2809	-0.063119	-5.8963E-05	NaN	58.679	46	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9993700	+		6183	14878	3031	3051							0.02542903520566142
FPNETIIEL	9	Unmodified	_FPNETIIEL_					0	0	0			REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	REV__tr|A0A553SJ23|A0A553SJ23_NIACIHistidinoldehydrogenaseOS=NialliacirculansOX=1397GN=hisDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	538.28714	1074.55973	1.4794	0.00079636	1.1423	0.00061488	2.6217	0.0014112	538.2879993866553	77.657	0.51616	79.409	79.2	79.716	1.7514	-0.050247	-0.00052277	NaN	58.679	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8644300	+		6184	14878	3031	3051							0.02542903520566142
FPNIPGKSL	9	Unmodified	_FPNIPGKSL_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7802001833916	2	486.779285	971.544017	2.3641	0.0011508	-0.18243	-8.8801E-05	2.1816	0.001062	486.7791143612536	39.206	0.7545	40.502	40.197	40.951	1.2961					62	24	3	0	0	0	0.02298	4	16501	16378;16422;16460;16501		96.936	29.592	1	4992800			6185	3050	3032	3052	7715;7716;7717;7718	7718					0.057106617941940385
FPNIPGKSL	9	Unmodified	_FPNIPGKSL_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7799560427666	2	486.779285	971.544017	1.2514	0.00060914	0.55279	0.00026909	1.8042	0.00087822	486.77957259264036	38.64	0.8586	40.476	40.178	41.037	1.8366					70	26	3	0	0	0	0.010388	6	16278	16149;16197;16235;16278;16331;16383		107.1	39.756	1	4645200			6186	3050	3032	3052	7719;7720;7721;7722;7723;7724	7722					0.057106617941940385
FPNIVIKGSEL	11	Unmodified	_FPNIVIKGSEL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8497802615166	2	608.850438	1215.68632	0.81524	0.00049636	3.5481	0.0021603	4.3634	0.0026566	608.8506534056161	57.354	0.46766	58.769	58.462	58.929	1.4145					38	16	3	0	0	0	0.0026772	3	24064	23964;24016;24064		118.21	54.982	1	3749000			6187	4323	3033	3053	7725;7726;7727	7727					0.08710829745700721
FPNIVIKGSEL	11	Unmodified	_FPNIVIKGSEL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8512451052666	2	608.850438	1215.68632	0.79195	0.00048218	-0.448	-0.00027276	0.34395	0.00020941	608.8505978733318	56.83	0.50776	58.798	58.425	58.933	1.9684					24	16	2	0	0	0	0.027628	2	23843	23799;23843		84.522	39.751	1	4789500			6188	4323	3033	3053	7728;7729	7729					0.08710829745700721
FPNRVVFQEF	10	Unmodified	_FPNRVVFQEF_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8336059451103	2	641.83258	1281.65061	1.4463	0.00092827	-0.31556	-0.00020254	1.1307	0.00072573	641.8323446984969	56.909	0.36819	58.324	58.123	58.491	1.4145					16	11	2	0	0	0	0.21129	2	23862	23810;23862		47.594	26.057	1	1483300			6189	1266	3034	3054	7730;7731	7731					0.021047922886964443
FPNRVVFQEF	10	Unmodified	_FPNRVVFQEF_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8347045779228	2	641.83258	1281.65061	0.8559	0.00054934	0.64264	0.00041247	1.4985	0.00096181	641.8322759504683	56.322	0.40014	58.291	58.087	58.487	1.9684					22	12	2	0	0	0	0.4341	2	23579	23579;23640		31.268	17.362	1	1554300			6190	1266	3034	3054	7732;7733	7732					0.021047922886964443
FPNVSSFEW	9	Unmodified	_FPNVSSFEW_					0	0	0		PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant;ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.7576171755791	2	556.756007	1111.49746	2.5365	0.0014122	0.54061	0.00030099	3.0771	0.0017132	556.7560754689666	77.063	0.56843	78.344	78.001	78.569	1.2809					40	17	4	0	0	0	0.063746	2	32335	32335;32392		62.573	34.086	1	3489400			6191	2812	3035	3055	7734;7735	7734					-0.053828228277552626
FPNVSSFEW	9	Unmodified	_FPNVSSFEW_					0	0	0		PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant;ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.7570678591728	2	556.756007	1111.49746	2.462	0.0013707	0.42173	0.0002348	2.8837	0.0016055	556.75617755957	76.482	0.5108	78.25	78.003	78.514	1.7672					36	15	3	0	0	0	0.026836	2	32100	32100;32158		92.491	41.636	1	3065600			6192	2812	3035	3055	7736;7737	7736					-0.053828228277552626
FPNVSSFEW	9	Unmodified	_FPNVSSFEW_					0	0	0		PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant;ENSG00000138078|ENST00000409411|PREPL;nc|ENSG00000138078|Q4J6C6-2|PREPL;nc|ENSG00000138078|Q4J6C6-3|PREPL;nc|ENSG00000138078|Q4J6C6|PREPL	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	PREPL|p.Q222Hfs*2|1|0.15|ENSG00000138078|chr2:44342503-44342504|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1112.509814441204	1	1112.50474	1111.49746	2.4873	0.0027672	-0.24846	-0.00027641	2.2389	0.0024907	1112.504227415089	76.544	0.22878	78.311	78.19	78.419	1.7672					10	6	2	0	0	0	0.098163	1	32144	32144		49.933	28.186	1	905630			6193	2812	3035	3055	7738	7738					-0.053828228277552626
FPPLLQQR	8	Unmodified	_FPPLLQQR_					0	0	0			REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.0325500369072	3	333.53091	997.5709	0.62948	0.00020995	0.92439	0.00030831	1.5539	0.00051826	333.53130243621604	31.301	0.66623	31.592	31.239	31.905	0.29086					30	21	2	0	0	0	2.3239	1	13173	13173		0.45834	0.45834	1	387520	+		6194	11313	3036	3056	7739	7739					0.07201770405367824
FPPLLQQR	8	Unmodified	_FPPLLQQR_					0	0	0			REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	333.53091	997.5709	-0.41555	-0.0001386	2.1382	0.00071315	1.7226	0.00057455	333.53161915250223	29.998	0.39893	31.28	31.072	31.471	1.2825	-0.1245	0.0010555	NaN	0.45834	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526260	+		6195	11313	3036	3056							0.07201770405367824
FPPLLQQR	8	Unmodified	_FPPLLQQR_					0	0	0			REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	333.53091	997.5709	0.25222	8.4123E-05	0.25968	8.661E-05	0.51189	0.00017073	333.53087072481725	29.543	0.33222	31.342	31.174	31.506	1.7987	-0.062674	-0.00082409	NaN	0.45834	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525930	+		6196	11313	3036	3056							0.07201770405367824
FPPLPLGP	8	Unmodified	_FPPLPLGP_					0	0	0			REV__ENST00000472558.6_1_12:6658018-6658174:-|nuORF	REV__ENST00000472558.6_1_12:6658018-6658174:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3168517947197	2	419.247089	836.479626	2.6734	0.0011208	1.2873	0.00053969	3.9607	0.0016605	419.24740311151777	80.751	0.20715	81.985	81.863	82.07	1.2332					10	6	2	0	0	0	2.3239	1	33926	33926		2.8892	0	1	399040	+		6197	13296	3037	3057	7740	7740					0.05484506708057779
FPPNFWIWTL	10	Unmodified	_FPPNFWIWTL_					0	0	0		ENSG00000126062|ENST00000266025|TMEM115	ENSG00000126062|ENST00000266025|TMEM115	ENSG00000126062|ENST00000266025|TMEM115	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	660.8437988162041	2	660.842416	1319.67028	2.4877	0.001644	-3.3552	-0.0022172	-0.8675	-0.00057328	660.8400653327783	73.278	0.40834	75.088	74.86	75.268	1.8101					29	12	3	0	0	0	0.41677	1	30714	30714		32.305	10.559	1	2008400			6198	2298	3038	3058	7741	7741					0.02323168299471945
FPPPFLPPP	9	Unmodified	_FPPPFLPPP_					0	0	0			REV__nc|ENSG00000206561|Q9Y215-7|COLQ	REV__nc|ENSG00000206561|Q9Y215-7|COLQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7820007205009	2	504.781296	1007.54804	2.9104	0.0014691	-0.4294	-0.00021675	2.481	0.0012524	504.78152441156396	71.055	0.694	72.397	72.054	72.748	1.3415					49	22	3	0	0	0	0.11074	2	29727	29727;29823		45.75	0	1	3932800	+		6199	11828	3039	3059	7742;7743	7742					0.04456751287887073
FPQEELPVKL	10	Unmodified	_FPQEELPVKL_					0	0	0		ENST00000496105.1_1_3:113169108-113212968:-|nuORF;ENSG00000163611|ENST00000295872|SPICE1	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	ENST00000496105.1_1_3:113169108-113212968:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3381225466728	2	600.337164	1198.65977	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.945	1	58.913	58.413	59.413	1.9684								0	0	0	0.024438	1	23887	23887		51.415	25.147	1				6200	3701	3040	3060	7744	7744					0.0683914085439028
FPQIEINKM	9	Unmodified	_FPQIEINKM_					0	0	0		ENST00000485073.5_1_1:6713895-6761860:-|nuORF;nc|ENSG00000007923|Q9NVH1-3|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;DNAJC11|p.A506Vfs*21|1|0.21|ENSG00000007923|chr1:6637205-6637206|-/GA|frameshift_variant;ENSG00000007923|ENST00000377577|DNAJC11	ENST00000485073.5_1_1:6713895-6761860:-|nuORF	ENST00000485073.5_1_1:6713895-6761860:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2989990115166	2	560.296985	1118.57942	2.7882	0.0015622	0.16688	9.3501E-05	2.9551	0.0016557	560.2964960770101	50.269	0.2851	51.66	51.482	51.767	1.3911					13	8	2	0	0	0	0.026411	1	21022	21022		93.166	47.466	1	888840			6201	420	3041	3061	7745	7745					0.024869562596677497
FPQIEINKM	9	Unmodified	_FPQIEINKM_					0	0	0		ENST00000485073.5_1_1:6713895-6761860:-|nuORF;nc|ENSG00000007923|Q9NVH1-3|DNAJC11;nc|ENSG00000007923|Q9NVH1-2|DNAJC11;DNAJC11|p.A506Vfs*21|1|0.21|ENSG00000007923|chr1:6637205-6637206|-/GA|frameshift_variant;ENSG00000007923|ENST00000377577|DNAJC11	ENST00000485073.5_1_1:6713895-6761860:-|nuORF	ENST00000485073.5_1_1:6713895-6761860:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	560.296985	1118.57942	1.6685	0.00093487	0.75846	0.00042497	2.427	0.0013598	560.2975817071172	49.657	0.37614	51.634	51.475	51.851	1.9772	-0.013056	0.00029077	NaN	93.166	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789130			6202	420	3041	3061							0.024869562596677497
FPQIGELIL	9	Unmodified	_FPQIGELIL_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3052856326103	2	515.302593	1028.59063	4.386	0.0022601	1.0455	0.00053873	5.4315	0.0027989	515.3023581107745	91.24	0.63586	92.222	91.812	92.448	0.98157					43	19	3	0	0	0	0.059546	2	38404	38404;38456		64.236	13.381	1	4155600			6203	3691	3042	3062	7746;7747	7746					0.07748101625475101
FPQIGELIL	9	Unmodified	_FPQIGELIL_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3048583865166	2	515.302593	1028.59063	3.9341	0.0020273	1.4063	0.00072467	5.3404	0.0027519	515.3026999123548	90.834	0.50957	92.2	91.897	92.406	1.366					38	15	3	0	0	0	0.049839	1	38258	38258		68.081	19.735	1	3133100			6204	3691	3042	3062	7748	7748					0.07748101625475101
FPQKWPDLL	9	Unmodified	_FPQKWPDLL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;nc|ENSG00000124207|P55060-2|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3154174685478	2	572.313492	1142.61243	2.8231	0.0016157	0.591	0.00033824	3.4141	0.0019539	572.3137182065758	65.358	1.235	66.757	66.193	67.428	1.3989					136	39	4	0	0	0	0.052364	8	27379	27240;27289;27328;27379;27419;27513;27570;27622		82.529	46.679	1	21138000			6205	2217	3043	3063	7749;7750;7751;7752;7753;7754;7755;7756	7752					0.04682906374023332
FPQKWPDLL	9	Unmodified	_FPQKWPDLL_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;nc|ENSG00000124207|P55060-2|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3154785037041	2	572.313492	1142.61243	1.9293	0.0011041	1.076	0.00061582	3.0053	0.00172	572.3140087242894	64.87	1.3778	66.791	66.163	67.541	1.921					150	43	4	0	0	0	0.047853	10	27042	26995;27042;27093;27131;27183;27222;27274;27314;27368;27422		85.642	42.58	1	14159000			6206	2217	3043	3063	7757;7758;7759;7760;7761;7762;7763;7764;7765;7766	7758					0.04682906374023332
FPQLDVSRL	9	Unmodified	_FPQLDVSRL_					0	0	0		ENSG00000165959|ENST00000298912|CLMN	ENSG00000165959|ENST00000298912|CLMN	ENSG00000165959|ENST00000298912|CLMN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.8016235232353	2	537.800749	1073.58694	1.4492	0.00077936	-0.10819	-5.8187E-05	1.341	0.00072117	537.8010534360955	56.652	0.39825	58.067	57.816	58.214	1.4145					21	12	2	0	0	0	0.050451	1	23744	23744		67.838	13.065	1	1853100			6207	3873	3044	3064	7767	7767					0.053094318516286876
FPQLDVSRL	9	Unmodified	_FPQLDVSRL_					0	0	0		ENSG00000165959|ENST00000298912|CLMN	ENSG00000165959|ENST00000298912|CLMN	ENSG00000165959|ENST00000298912|CLMN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.800749	1073.58694	1.2772	0.0006869	-0.29415	-0.00015819	0.98309	0.00052871	537.8007635105075	56.104	0.36914	58.073	57.841	58.21	1.9684	0.0029413	-0.00011862	NaN	67.838	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1490800			6208	3873	3044	3064							0.053094318516286876
FPQYVMDVL	9	Unmodified	_FPQYVMDVL_					0	0	0		nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17	nc|ENSG00000100201|Q92841-1|DDX17	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2786132693291	2	556.27826	1110.54197	2.5776	0.0014338	-1.2462	-0.00069322	1.3314	0.00074063	556.2768249360261	80.294	0.40501	81.545	81.324	81.729	1.2512					27	12	3	0	0	0	0.20671	1	33715	33715		32.305	19.774	1	1580800			6209	1252	3045	3065	7768	7768					-0.008881350059255055
FPQYVMDVL	9	Unmodified	_FPQYVMDVL_					0	0	0		nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17	nc|ENSG00000100201|Q92841-1|DDX17	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2769042849541	2	556.27826	1110.54197	1.2975	0.0007218	-0.81289	-0.00045219	0.48466	0.0002696	556.2766755591672	79.825	0.34166	81.542	81.353	81.695	1.7167					24	10	3	0	0	0	0.20671	2	33455	33455;33504		32.305	19.263	1	1400900			6210	1252	3045	3065	7769;7770	7769					-0.008881350059255055
FPRHIEPEL	9	Unmodified	_FPRHIEPEL_					0	0	0		ENSG00000146574|ENST00000316731|CCZ1B;ENSG00000122674|ENST00000325974|CCZ1	ENSG00000146574|ENST00000316731|CCZ1B	ENSG00000146574|ENST00000316731|CCZ1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3074828982353	2	569.306198	1136.59784	0.86338	0.00049153	1.5435	0.00087873	2.4069	0.0013703	569.306911885401	30.254	0.27898	31.537	31.378	31.657	1.2825					13	8	2	0	0	0	0.46566	1	12722	12722		17.113	0	1	532620			6211	2164	3046	3066	7771	7771					0.035008342259061465
FPRRQKRAGP	10	Unmodified	_FPRRQKRAGP_					0	0	0			REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2441284060478	3	404.907262	1211.69996	2.6974	0.0010922	3.3313	0.0013489	6.0287	0.0024411	404.9079888308261	85.094	0.37497	85.346	85.133	85.508	0.25227					27	11	3	0	0	0	0.88508	1	35624	35624		3.0723	1.33	1	1103200	+		6212	13974	3047	3067	7772	7772					0.10257545088188635
FPRRQKRAGP	10	Unmodified	_FPRRQKRAGP_					0	0	0			REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	404.907262	1211.69996	1.1458	0.00046394	5.0548	0.0020467	6.2006	0.0025107	405.2441298740408	85.523	0.37285	85.523	85.292	85.665	0	0.088259	0.0010461	NaN	3.0723	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1234600	+		6213	13974	3047	3067							0.10257545088188635
FPRRQKRAGP	10	Unmodified	_FPRRQKRAGP_					0	0	0			REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	REV__ENST00000573622.1_1_12:9795539-9795680:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	404.907262	1211.69996	2.6974	0.0010922	3.3313	0.0013489	6.0287	0.0024411	404.9079888308261	85.094	0.37497	85.346	85.133	85.508	0.25227	-0.088259	-0.0010475	NaN	3.0723	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1103200	+		6214	13974	3047	3067							0.10257545088188635
FPRVKVIFK	9	Unmodified	_FPRVKVIFK_					0	0	0		tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	567.7036010622978	2	567.363319	1132.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.124	1	41.441	40.941	41.941	0.31683								0	0	0	0.42693	1	17279	17279		2.0598	0	1				6215	16698	3048	3068	7773	7773					0.15103768778658377
FPRVKVIFK	9	Unmodified	_FPRVKVIFK_					0	0	0		tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3649169802666	2	567.363319	1132.71209	0.94127	0.00053404	1.4024	0.00079568	2.3437	0.0013297	567.3643615881423	29.498	0.54728	30.78	30.495	31.042	1.2825					30	17	3	0	0	0	0.81521	2	12368	12368;12424		2.0598	0	1	3826200			6216	16698	3048	3068	7774;7775	7774					0.15103768778658377
FPRVKVIFK	9	Unmodified	_FPRVKVIFK_					0	0	0		tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3647338747978	2	567.363319	1132.71209	0.7963	0.00045179	1.8629	0.0010569	2.6592	0.0015087	567.3643146692787	28.964	0.90611	30.763	30.389	31.295	1.7987					42	29	3	0	0	0	0.8462	1	12127	12127		0.52476	0	1	4473800			6217	16698	3048	3068	7776	7776					0.15103768778658377
FPRVTPVENTM	11	Unmodified	_FPRVTPVENTM_					0	0	0		ENST00000453770.1_1_20:1514156-1534896:-|nuORF	ENST00000453770.1_1_20:1514156-1534896:-|nuORF	ENST00000453770.1_1_20:1514156-1534896:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888122439384	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.272	1	18.17	17.67	18.67	0.89794								0	0	0	0.63775	1	7189	7189		0.50596	0	1				6218	6632	3049	3069	7777	7777					0.010571113458127002
FPRVYRRL	8	Unmodified	_FPRVYRRL_					0	0	0		ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8357421755791	2	553.832717	1105.65088	1.3456	0.00074524	-2.2399	-0.0012405	-0.89429	-0.00049529	553.8311677973015	68.823	0.82233	70.676	70.346	71.168	1.853					49	26	2	0	0	0	0.87803	1	28787	28787		10.183	3.4602	1	1890400			6219	6522	3050	3070	7778	7778					0.10228256799223345
FPRVYRRL	8	Unmodified	_FPRVYRRL_					0	0	0		ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	ENST00000434837.7_1_6:37665242-37665689:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	553.832717	1105.65088	1.9772	0.001095	-0.84274	-0.00046674	1.1344	0.00062828	553.8320508121676	68.968	0.62514	70.334	69.725	70.35	1.3657	-0.1711	0.00042202	NaN	10.183	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1526900			6220	6522	3050	3070							0.10228256799223345
FPSASNVMLL	10	Unmodified	_FPSASNVMLL_					0	0	0		tr|A0A553SHT8|A0A553SHT8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13605PE=3SV=1	tr|A0A553SHT8|A0A553SHT8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13605PE=3SV=1	tr|A0A553SHT8|A0A553SHT8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13605PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7850829958916	2	539.78371	1077.55287	2.6546	0.0014329	-0.24508	-0.00013229	2.4095	0.0013006	539.7832197077774	78.116	0.91212	79.396	78.949	79.862	1.2809					90	29	5	0	0	0	0.80568	1	32940	32940		11.64	3.047	1	8955600			6221	16168	3051	3071	7779	7779					0.017192673683666726
FPSCLPTVAF	10	Unmodified	_FPSCLPTVAF_					0	0	0		ENSG00000259224|ENST00000412468|SLC35G6;ENSG00000236396|ENST00000588001|SLC35G4;ENSG00000177710|ENST00000382435|SLC35G5	ENSG00000259224|ENST00000412468|SLC35G6	ENSG00000259224|ENST00000412468|SLC35G6	MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2808715701103	2	541.272978	1080.5314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.048	1	68.937	68.437	69.437	1.8889								0	0	0	0.32006	1	28128	28128		32.305	5.4218	1				6222	4460	3052	3072	7780	7780					-0.0056411766038309
FPSGIIKVF	9	Unmodified	_FPSGIIKVF_					0	0	0		nc|ENSG00000157107|Q0JRZ9-3|FCHO2;ENSG00000157107|ENST00000430046|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2984496951103	2	504.299853	1006.58515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.956	1	66.355	65.855	66.855	1.3989								0	0	0	0.17971	1	27243	27243		27.629	0.74515	1				6223	3465	3053	3073	7781	7781					0.08212422833673827
FPSGIIKVF	9	Unmodified	_FPSGIIKVF_					0	0	0		nc|ENSG00000157107|Q0JRZ9-3|FCHO2;ENSG00000157107|ENST00000430046|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	nc|ENSG00000157107|Q0JRZ9-3|FCHO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2989990115166	2	504.299853	1006.58515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.469	1	66.397	65.897	66.897	1.928								0	0	0	0.091705	1	27046	27046		36.127	14.38	1				6224	3465	3053	3073	7782	7782					0.08212422833673827
FPSLEVKEL	9	Unmodified	_FPSLEVKEL_					0	0	0		ENSG00000122335|ENST00000647468|SERAC1;ENST00000606965.5_1_6:158535743-158540110:-|nuORF;ENST00000607742.5_1_6:158532400-158537340:-|nuORF	ENSG00000122335|ENST00000647468|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2996093630791	2	531.297507	1060.58046	1.5247	0.00081005	1.8488	0.00098227	3.3735	0.0017923	531.2983331070004	54.014	0.44622	55.419	55.167	55.613	1.4048					33	14	3	0	0	0	0.010388	2	22637	22594;22637		107.1	44.527	1	4658900			6225	2152	3054	3074	7783;7784	7784					0.05259493900234702
FPSLEVKEL	9	Unmodified	_FPSLEVKEL_					0	0	0		ENSG00000122335|ENST00000647468|SERAC1;ENST00000606965.5_1_6:158535743-158540110:-|nuORF;ENST00000607742.5_1_6:158532400-158537340:-|nuORF	ENSG00000122335|ENST00000647468|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2986938357353	2	531.297507	1060.58046	0.93423	0.00049635	1.1858	0.00063	2.12	0.0011264	531.2982459096049	53.499	0.36427	55.468	55.325	55.69	1.9697					19	11	2	0	0	0	0.025926	1	22408	22408		93.938	33.864	1	4865300			6226	2152	3054	3074	7785	7785					0.05259493900234702
FPSMPIKL	8	Unmodified	_FPSMPIKL_					0	0	0		ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.7680236697197	2	466.767332	931.52011	2.4581	0.0011474	-0.10795	-5.0386E-05	2.3502	0.001097	466.7670677585808	61.332	0.28461	63.289	63.148	63.433	1.9571					13	8	2	0	0	0	0.67986	1	25723	25723		32.305	9.1571	1	906380			6227	2389	3055	3075	7786	7786					0.051611050361543676
FPSMPIKL	8	Unmodified	_FPSMPIKL_					0	0	0		ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	466.767332	931.52011	3.0941	0.0014442	-1.2757	-0.00059546	1.8184	0.00084877	466.7663895835037	61.92	0.28371	63.337	63.176	63.459	1.4177	0.024424	-0.00056095	NaN	32.305	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	870490			6228	2389	3055	3075							0.051611050361543676
FPSPPAFIF	9	Unmodified	_FPSPPAFIF_					0	0	0		ENSG00000176986|ENST00000345254|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	ENSG00000176986|ENST00000345254|SEC24C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7721435427666	2	511.770929	1021.5273	4.447	0.0022759	-0.72525	-0.00037116	3.7218	0.0019047	511.77047904034646	91.007	0.47904	91.989	91.717	92.196	0.98157					23	14	2	0	0	0	0.3154	1	38332	38332		24.674	6.5389	1	628290			6229	4427	3056	3076	7787	7787					0.017401609082412506
FPSYVDKNLEL	11	Unmodified	_FPSYVDKNLEL_					0	0	0		nc|ENSG00000136925|Q5T7W7-2|TSTD2;ENST00000375165.5_1_9:100366979-100380093:-|nuORF;ENSG00000136925|ENST00000341170|TSTD2	nc|ENSG00000136925|Q5T7W7-2|TSTD2	nc|ENSG00000136925|Q5T7W7-2|TSTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.8440429568291	2	662.84281	1323.67107	1.5593	0.0010336	-0.16591	-0.00010997	1.3934	0.00092361	662.8425242616468	54.409	0.31913	55.814	55.645	55.964	1.4048					21	9	3	0	0	0	0.050041	1	22784	22784		66.683	39.054	1	1602600			6230	2749	3057	3077	7788	7788					0.022179181578621865
FPSYVDKNLEL	11	Unmodified	_FPSYVDKNLEL_					0	0	0		nc|ENSG00000136925|Q5T7W7-2|TSTD2;ENST00000375165.5_1_9:100366979-100380093:-|nuORF;ENSG00000136925|ENST00000341170|TSTD2	nc|ENSG00000136925|Q5T7W7-2|TSTD2	nc|ENSG00000136925|Q5T7W7-2|TSTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	662.8408080935478	2	662.84281	1323.67107	1.2554	0.00083214	-0.6104	-0.0004046	0.64501	0.00042754	662.8422598499387	53.907	0.3135	55.877	55.752	56.066	1.9697					14	9	2	0	0	0	0.14486	2	22629	22571;22629		47.732	27.317	1	881950			6231	2749	3057	3077	7789;7790	7790					0.022179181578621865
FPTEDLALW	9	Unmodified	_FPTEDLALW_					0	0	0		ENST00000327155.9_1_18:20513373-20513421:+|nuORF	ENST00000327155.9_1_18:20513373-20513421:+|nuORF	ENST00000327155.9_1_18:20513373-20513421:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2753784060478	2	546.274032	1090.53351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.652	1	80.903	80.403	81.403	1.2512								0	0	0	0.30487	1	33432	33432		18.135	0	1				6232	5873	3058	3078	7791	7791					-0.008133656509016873
FPTEDLALW	9	Unmodified	_FPTEDLALW_					0	0	0		ENST00000327155.9_1_18:20513373-20513421:+|nuORF	ENST00000327155.9_1_18:20513373-20513421:+|nuORF	ENST00000327155.9_1_18:20513373-20513421:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2750121951103	2	546.274032	1090.53351	1.865	0.0010188	-0.81661	-0.00044609	1.0484	0.00057272	546.2736550907259	79.157	0.30956	80.892	80.784	81.093	1.735					21	9	3	0	0	0	0.44535	1	33205	33205		18.135	0	1	2489300			6233	5873	3058	3078	7792	7792					-0.008133656509016873
FPTEHVKTK	9	Unmodified	_FPTEHVKTK_					0	0	0		ENSG00000186714|ENST00000335185|CCDC73	ENSG00000186714|ENST00000335185|CCDC73	ENSG00000186714|ENST00000335185|CCDC73	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	362.869591	1085.58694	-1.3258	-0.00048111	3.1337	0.0011371	1.8079	0.00065602	362.8707891589355	29.912	1.0157	29.912	29.453	30.469	0					42	32	2	0	0	0	0.11916	1	12418	12418		0.18151	0.18151	1	521860			6234	4803	3059	3079	7793	7793					0.04757431851612637
FPTSGMGKSA	10	Unmodified	_FPTSGMGKSA_					0	0	0			REV__tr|A0A7D7AH78|A0A7D7AH78_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11415PE=3SV=1	REV__tr|A0A7D7AH78|A0A7D7AH78_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11415PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1599609255791	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.306	1	15.203	14.703	15.703	0.89664								0	0	0	0.66218	1	5934	5934		0.77653	0.31819	1		+		6235	15923	3060	3080	7794	7794					-0.03250451733936188
FPVEIKSFYM	10	Unmodified	_FPVEIKSFYM_					0	0	0		ENSG00000134440|ENST00000256854|NARS1;ENST00000589314.1_1_18:55270019-55270151:-|nuORF	ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	630.8192016482353	2	630.820292	1259.62603	1.5282	0.000964	-0.07909	-4.9892E-05	1.4491	0.0009141	630.8199682335938	67.015	0.3438	68.404	68.153	68.496	1.3888					25	10	3	0	0	0	0.37288	1	28104	28104		34.932	17.819	1	721180			6236	2615	3061	3081	7795	7795					0.006603960909842499
FPVEKIINL	9	Unmodified	_FPVEKIINL_					0	0	0		nc|ENSG00000116044|Q16236-3|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;PALLD-NFE2L2|2|fusion;PALLD-NFE2L2|3|fusion;PALLD-NFE2L2|1|fusion;PALLD-NFE2L2|4|fusion	nc|ENSG00000116044|Q16236-3|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8254882693291	2	536.823692	1071.63283	3.031	0.0016271	1.3057	0.00070092	4.3367	0.002328	536.8234621260565	61.884	0.62984	63.302	62.927	63.556	1.4177					38	19	4	0	0	0	0.010388	2	26001	25962;26001		107.1	22.954	1	16542000			6237	1948	3062	3082	7796;7797	7797					0.09988077033835907
FPVEKIINL	9	Unmodified	_FPVEKIINL_					0	0	0		nc|ENSG00000116044|Q16236-3|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;PALLD-NFE2L2|2|fusion;PALLD-NFE2L2|3|fusion;PALLD-NFE2L2|1|fusion;PALLD-NFE2L2|4|fusion	nc|ENSG00000116044|Q16236-3|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8251830935478	2	536.823692	1071.63283	2.341	0.0012567	0.97221	0.00052191	3.3132	0.0017786	536.8240022701988	61.298	0.59763	63.255	62.964	63.562	1.9571					39	18	4	0	0	0	0.0051116	2	25791	25751;25791		121.53	25.168	1	17489000			6238	1948	3062	3082	7798;7799	7799					0.09988077033835907
FPVEVNTVL	9	Unmodified	_FPVEVNTVL_					0	0	0		nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF	nc|ENSG00000100462|O14744-4|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1017.567858874798	1	1017.56152	1016.55425	1.2286	0.0012502	1.5996	0.0016277	2.8282	0.0028779	1017.5636778162602	67.284	0.6088	68.669	68.463	69.071	1.3842					29	19	2	0	0	0	0.049839	2	28233	28233;28284		68.081	15.812	1	1017200			6239	1282	3063	3083	7800;7801	7800					0.04663224728756177
FPVEVNTVL	9	Unmodified	_FPVEVNTVL_					0	0	0		nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;ENSG00000100462|ENST00000324366|PRMT5;ENST00000557758.1_1_14:23391634-23392032:-|nuORF	nc|ENSG00000100462|O14744-4|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1017.56152	1016.55425	1.2246	0.0012461	1.011	0.0010288	2.2356	0.0022749	1017.5628013186513	66.813	0.57944	68.701	68.616	69.195	1.8889	0.016452	-0.00035283	NaN	68.081	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	721530			6240	1282	3063	3083							0.04663224728756177
FPVFLYVV	8	Unmodified	_FPVFLYVV_					0	0	0		ENSG00000003393|ENST00000264276|ALS2	ENSG00000003393|ENST00000264276|ALS2	ENSG00000003393|ENST00000264276|ALS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2861511111259	2	492.283672	982.552791	2.6698	0.0013143	1.5691	0.00077246	4.2389	0.0020868	492.2840940168619	77.432	0.47067	77.748	77.479	77.95	0.31653					31	14	3	0	0	0	0.88958	1	32400	32400		2.8892	0.31174	1	2073300			6241	465	3064	3084	7802	7802					0.06081635430666665
FPVLAYNAI	9	Unmodified	_FPVLAYNAI_					0	0	0			REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2821838259697	2	504.28166	1006.54877	2.9332	0.0014792	-0.16903	-8.524E-05	2.7642	0.0013939	504.2806681476882	78.672	1.1203	79.939	79.602	80.723	1.2668					72	35	3	0	0	0	0.24063	2	33028	33028;33095		28.487	8.0332	1	1936800	+		6242	10342	3065	3085	7803;7804	7803					0.04575545936938852
FPVLAYNAI	9	Unmodified	_FPVLAYNAI_					0	0	0			REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2818786501884	2	504.28166	1006.54877	1.8898	0.000953	0.64951	0.00032754	2.5393	0.0012805	504.2813247486795	78.263	0.80854	79.998	79.573	80.382	1.735					56	25	3	0	0	0	0.19075	1	32781	32781		34.102	1.797	1	2064300	+		6243	10342	3065	3085	7805	7805					0.04575545936938852
FPVLAYNAI	9	Unmodified	_FPVLAYNAI_					0	0	0			REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.28166	1006.54877	2.9332	0.0014792	-0.16903	-8.524E-05	2.7642	0.0013939	504.2806681476882	78.672	1.1203	79.939	79.602	80.723	1.2668	-0.029537	-0.00041577	NaN	28.487	72	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1936800	+		6244	10342	3065	3085							0.04575545936938852
FPVPGSGLVL	10	Unmodified	_FPVPGSGLVL_					0	0	0		ENSG00000005893|ENST00000200639|LAMP2;nc|ENSG00000005893|P13473-2|LAMP2;nc|ENSG00000005893|P13473-3|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	985.5735961794853	1	985.571694	984.564418	3.7909	0.0037362	-0.10001	-9.857E-05	3.6909	0.0036376	985.5705358121318	78.752	1.3677	80.019	79.634	81.002	1.2668					102	43	4	0	0	0	0.049285	9	33022	33022;33061;33102;33153;33204;33246;33294;33339;33408		117.6	60.127	1	9259600			6245	497	3066	3086	7806;7807;7808;7809;7810;7811;7812;7813;7814	7806					0.07151832453996576
FPVPGSGLVL	10	Unmodified	_FPVPGSGLVL_					0	0	0		ENSG00000005893|ENST00000200639|LAMP2;nc|ENSG00000005893|P13473-2|LAMP2;nc|ENSG00000005893|P13473-3|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2895080447197	2	493.289485	984.564418	2.7642	0.0013635	-0.53226	-0.00026256	2.2319	0.001101	493.28882707282816	78.709	1.1236	79.976	79.787	80.91	1.2668					70	35	4	0	0	0	0.37288	3	33116	33065;33116;33172		50.855	12.704	1	7014800			6246	497	3066	3086	7815;7816;7817	7816					0.07151832453996576
FPVPGSGLVL	10	Unmodified	_FPVPGSGLVL_					0	0	0		ENSG00000005893|ENST00000200639|LAMP2;nc|ENSG00000005893|P13473-2|LAMP2;nc|ENSG00000005893|P13473-3|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	ENSG00000005893|ENST00000200639|LAMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	985.5750610232353	1	985.571694	984.564418	2.4345	0.0023994	-0.030342	-2.9904E-05	2.4042	0.0023695	985.5712595226335	78.29	1.3646	80.025	79.606	80.97	1.735					68	43	2	0	0	0	0.045213	7	32890	32786;32838;32890;32930;32983;33035;33090		112.59	55.122	1	10386000			6247	497	3066	3086	7818;7819;7820;7821;7822;7823;7824	7820					0.07151832453996576
FPVRDGVVL	9	Unmodified	_FPVRDGVVL_					0	0	0		nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;ENSG00000108175|ENST00000334512|ZMIZ1;ENST00000478045.5_1_7:44799906-44801193:+|nuORF;ZMIZ2|p.L467Sfs*96|1|0.33|ENSG00000122515|chr7:44761707-44761708|-/T|frameshift_variant;ENST00000463056.5_1_7:44799906-44807219:+|nuORF;ZMIZ2|p.I660Rfs*6|1|0.03|ENSG00000122515|chr7:44764988-44764989|-/CAGGGTCATCT|frameshift_variant;ZMIZ2|p.G659Vfs*11|1|0.04|ENSG00000122515|chr7:44764987-44764988|-/TTAT|frameshift_variant;nc|ENSG00000122515|Q8NF64-3|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;ENSG00000122515|ENST00000309315|ZMIZ2	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2939941287041	2	501.292559	1000.57057	2.0059	0.0010056	3.5521	0.0017807	5.5581	0.0027862	501.2941167357046	43.607	0.51493	44.96	44.677	45.191	1.3536					36	16	3	0	0	0	0.18337	2	18278	18278;18330		34.932	2.4784	1	2869500			6248	1623	3067	3087	7825;7826	7825					0.07030350685522535
FPVTCETGPGK	11	Unmodified	_FPVTCETGPGK_					0	0	0		nc|ENSG00000131482|P35575-2|G6PC1	nc|ENSG00000131482|P35575-2|G6PC1	nc|ENSG00000131482|P35575-2|G6PC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	568.8284789919853	2	568.276249	1134.53795	2.7231	0.0015474	-4.2906	-0.0024383	-1.5676	-0.00089082	568.2728064860949	61.967	0.59366	63.924	63.497	64.091	1.9571					32	18	2	0	0	0	0.14479	1	26040	26040		17.113	6.289	1	1419000			6249	7870	3068	3088	7827	7827					-0.02394224499653319
FPWAPLHFL	9	Unmodified	_FPWAPLHFL_					0	0	0			REV__ENST00000461211.5_1_20:1423632-1423911:-|nuORF	REV__ENST00000461211.5_1_20:1423632-1423911:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.5393859744072	3	376.539405	1126.59639	1.5305	0.00057629	-0.78809	-0.00029675	0.7424	0.00027954	376.5392336215046	45.246	0.67469	46.612	46.18	46.855	1.3653					57	20	5	0	0	0	0.39097	1	18889	18889		19.257	0.88389	1	8766100	+		6250	13194	3069	3089	7828	7828					0.03815244927773165
FPWAPLHFL	9	Unmodified	_FPWAPLHFL_					0	0	0			REV__ENST00000461211.5_1_20:1423632-1423911:-|nuORF	REV__ENST00000461211.5_1_20:1423632-1423911:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.5395080447197	3	376.539405	1126.59639	1.7494	0.0006587	-1.0279	-0.00038705	0.72144	0.00027165	376.53915278548027	44.633	0.76593	46.593	46.162	46.928	1.9596					61	23	5	0	0	0	0.39097	1	18747	18747		13.906	0.29118	1	8175000	+		6251	13194	3069	3089	7829	7829					0.03815244927773165
FPWVWVLI	8	Unmodified	_FPWVWVLI_					0	0	0			REV__ENSG00000172461|ENST00000302103|FUT9	REV__ENSG00000172461|ENST00000302103|FUT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3099243044853	2	530.304939	1058.59532	5.8791	0.0031177	3.3852	0.0017952	9.2643	0.0049129	530.3076408698079	88.767	0.90277	89.823	89.53	90.433	1.0562					43	27	2	0	0	0	0.84707	1	37484	37484		17.087	2.5049	1	3007200	+		6252	11066	3070	3090	7830	7830					0.06837030558904189
FPYKIDDIL	9	Unmodified	_FPYKIDDIL_					0	0	0		ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3071166872978	2	562.305332	1122.59611	2.2232	0.0012501	1.096	0.0006163	3.3192	0.0018664	562.3059960484217	65.968	0.91154	67.367	66.941	67.853	1.3989					67	29	3	0	0	0	0.1388	2	27698	27698;27750		39.95	7.6442	1	2148800			6253	2327	3071	3091	7831;7832	7831					0.03971780417282389
FPYKIDDIL	9	Unmodified	_FPYKIDDIL_					0	0	0		ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3082153201103	2	562.305332	1122.59611	1.7794	0.0010006	2.1373	0.0012018	3.9167	0.0022024	562.3064982360569	65.544	0.91997	67.452	67.001	67.921	1.9085					49	29	2	0	0	0	0.093059	2	27502	27502;27554		51.63	9.7902	1	2137100			6254	2327	3071	3091	7833;7834	7833					0.03971780417282389
FQDEINWRL	9	Unmodified	_FQDEINWRL_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.8070556521416	2	610.806562	1219.59857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.552	1	58.875	58.375	59.375	0.32298								0	0	0	0.21581	1	24540	24540		24.991	13.496	1				6255	1384	3072	3092	7835	7835					-0.0024437112506348058
FQDEINWRL	9	Unmodified	_FQDEINWRL_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.8089477419853	2	610.806562	1219.59857	0.39894	0.00024367	0.63792	0.00038965	1.0369	0.00063332	610.8078844193665	57.462	0.32176	58.877	58.607	58.929	1.4145					17	11	2	0	0	0	0.0080158	1	24081	24081		110.67	52.953	1	3826700			6256	1384	3072	3092	7836	7836					-0.0024437112506348058
FQDEINWRL	9	Unmodified	_FQDEINWRL_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.8087036013603	2	610.806562	1219.59857	0.70848	0.00043275	-0.052271	-3.1927E-05	0.65621	0.00040082	610.807321175554	56.892	0.33264	58.86	58.631	58.964	1.9684					18	10	3	0	0	0	0.0080158	1	23849	23849		110.67	55.172	1	4000000			6257	1384	3072	3092	7837	7837					-0.0024437112506348058
FQDPSFPAI	9	Unmodified	_FQDPSFPAI_					0	0	0		ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2538635134697	2	511.2531	1020.49165	3.462	0.00177	2.4478	0.0012515	5.9098	0.0030214	511.2535250838803	64.593	0.39977	66	65.77	66.17	1.4071					24	12	3	0	0	0	0.18809	1	27073	27073		34.402	7.5181	1	1998300			6258	3653	3073	3093	7838	7838					-0.01777921339430577
FQDPSFPAI	9	Unmodified	_FQDPSFPAI_					0	0	0		ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.8152648806572	2	511.2531	1020.49165	3.0808	0.001575	0.59029	0.00030179	3.671	0.0018768	511.25342819083477	64.093	0.4994	66.021	65.764	66.263	1.928					28	15	3	0	0	0	0.098208	1	26866	26866		24.021	8.1734	1	1594200			6259	3653	3073	3093	7839	7839					-0.01777921339430577
FQDPSFPAI	9	Unmodified	_FQDPSFPAI_					0	0	0		ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	ENSG00000162909|ENST00000295006|CAPN2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.2531	1020.49165	2.082	0.0010645	0.44683	0.00022844	2.5289	0.0012929	511.25308750079296	65.726	0.24995	66.053	65.929	66.179	0.32689	0.028254	-0.00058165	NaN	30.637	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282650			6260	3653	3073	3093							-0.01777921339430577
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2774536013603	2	508.276575	1014.5386	1.9848	0.0010088	0.072034	3.6613E-05	2.0568	0.0010454	508.27663489556954	65.913	0.54398	65.913	65.579	66.123	0					49	16	4	0	0	0	0.02878	4	27453	27369;27415;27453;27504		89.401	37.132	1	18496000			6261	2168	3074	3094	7840;7841;7842;7843	7842					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1015.547534167767	1	1015.54587	1014.5386	1.7654	0.0017928	0.40754	0.00041387	2.1729	0.0022067	1015.5462188004653	65.892	0.44589	65.892	65.644	66.09	0					37	13	3	0	0	0	0.0061207	3	27443	27397;27443;27492		117.76	50.923	1	5078000			6262	2168	3074	3094	7844;7845;7846	7845					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2778808474541	2	508.276575	1014.5386	2.1701	0.001103	0.18789	9.5499E-05	2.358	0.0011985	508.2766837721828	65.428	0.6348	65.755	65.42	66.054	0.32689					50	19	3	0	0	0	0.036104	5	27398	27313;27361;27398;27439;27482		79.596	28.64	1	19085000			6263	2168	3074	3094	7847;7848;7849;7850;7851	7849					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1015.547778308392	1	1015.54587	1014.5386	2.2414	0.0022763	0.57433	0.00058326	2.8158	0.0028595	1015.5459680565435	65.49	0.47431	65.817	65.517	65.991	0.32689					39	14	3	0	0	0	0.0061207	3	27402	27351;27402;27451		117.76	57.687	1	4197900			6264	2168	3074	3094	7852;7853;7854	7853					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2781860232353	2	508.276575	1014.5386	3.2645	0.0016593	-0.23087	-0.00011735	3.0336	0.0015419	508.2765677388507	64.256	0.6802	65.663	65.305	65.985	1.4071					68	21	5	0	0	0	0.023685	4	26962	26864;26911;26962;27001		96.367	37.688	1	52809000			6265	2168	3074	3094	7855;7856;7857;7858	7857					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1015.548388659954	1	1015.54587	1014.5386	2.3266	0.0023628	0.52364	0.00053178	2.8503	0.0028946	1015.5458655335444	64.288	0.58662	65.695	65.336	65.923	1.4071					59	18	4	0	0	0	0.00023236	4	26941	26893;26941;26989;27034		140.63	69.5	1	19875000			6266	2168	3074	3094	7859;7860;7861;7862	7860					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2780639529228	2	508.276575	1014.5386	3.0459	0.0015482	-0.048765	-2.4786E-05	2.9972	0.0015234	508.2766667236508	63.782	0.55915	65.71	65.36	65.919	1.928					57	17	4	0	0	0	0.0060384	5	26778	26651;26700;26739;26778;26820		118.07	49.988	1	34221000			6267	2168	3074	3094	7863;7864;7865;7866;7867	7866					0.03190938211696448
FQDPVPLTV	9	Unmodified	_FQDPVPLTV_					0	0	0		nc|ENSG00000122779|O15164-2|TRIM24;ENSG00000122779|ENST00000343526|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	nc|ENSG00000122779|O15164-2|TRIM24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1015.548266589642	1	1015.54587	1014.5386	2.8469	0.0028911	-0.21459	-0.00021792	2.6323	0.0026732	1015.5452481746106	63.73	0.52795	65.658	65.36	65.888	1.928					54	16	4	0	0	0	4.7293E-05	4	26779	26681;26728;26779;26824		152.89	77.957	1	14233000			6268	2168	3074	3094	7868;7869;7870;7871	7870					0.03190938211696448
FQEEKEYIE	9	Unmodified	_FQEEKEYIE_					0	0	0			REV__nc|ENSG00000138778|Q02224-3|CENPE	REV__nc|ENSG00000138778|Q02224-3|CENPE	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5240051150322	3	405.524038	1213.55028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.287	1	25.971	25.471	26.471	1.6845								0	0	0	0.42693	1	10144	10144		0.96228	0	1		+		6269	10082	3075	3095	7872	7872					-0.04794909555607774
FQEMESDKK	9	Unmodified	_FQEMESDKK_					0	0	0		ENSG00000179148|ENST00000448843|ALOXE3;nc|ENSG00000179148|Q9BYJ1-2|ALOXE3	ENSG00000179148|ENST00000448843|ALOXE3	ENSG00000179148|ENST00000448843|ALOXE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1806518435478	3	381.177985	1140.51212	0.29308	0.00011172	2.5202	0.00096064	2.8133	0.0010724	381.18117549128453	27.544	1.6836	28.823	28.382	30.066	1.2789					108	54	3	0	0	0	0.70108	1	11816	11816		2.2828	0	1	1035200			6270	4507	3076	3096	7873	7873					-0.052511187419213456
FQFIGSSQYS	10	Unmodified	_FQFIGSSQYS_					0	0	0		ENSG00000124788|ENST00000436367|ATXN1	ENSG00000124788|ENST00000436367|ATXN1	ENSG00000124788|ENST00000436367|ATXN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.2770873904228	2	582.272021	1162.52949	3.0958	0.0018026	2.2816	0.0013285	5.3773	0.0031311	583.2756563451468	101.05	0.20432	101.24	101.13	101.34	0.18047					25	6	6	0	0	0	0.86043	1	42530	42530		5.7319	0.43497	1	39349000			6271	2244	3077	3097	7874	7874					-0.045274551446027544
FQFLKMTT	8	Unmodified	_FQFLKMTT_					0	0	0		nc|ENSG844|Q9WJR5|ERVK-19_pol;nc|ENSG853|Q9UQG0|ERVK-11	nc|ENSG844|Q9WJR5|ERVK-19_pol	nc|ENSG844|Q9WJR5|ERVK-19_pol	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1793701052666	3	339.180889	1014.52084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.87	1	101.87	101.37	102.37	0								0	0	0	1.0178	1	42663	42663		0.40072	0	1				6272	8029	3078	3098	7875	7875					0.014158996851961092
FQKAVKLVI	9	Unmodified	_FQKAVKLVI_					0	0	0		ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.2299682497978	3	349.23046	1044.66955	-0.7415	-0.00025896	-1.282	-0.0004477	-2.0235	-0.00070666	349.2302131530192	33.264	0.32613	34.542	34.355	34.681	1.2782					47	20	3	0	0	0	0.19075	2	13931	13895;13931		24.991	6.6179	1	44777000			6273	2595	3079	3099	7876;7877	7877					0.14900373650425536
FQKAVKLVI	9	Unmodified	_FQKAVKLVI_					0	0	0		ENSG00000134109|ENST00000256497|EDEM1;nc|ENSG00000134109|Q92611-2|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.2300903201103	3	349.23046	1044.66955	0.38513	0.0001345	-1.4739	-0.00051473	-1.0888	-0.00038023	349.2299491851652	32.739	0.46486	34.564	34.273	34.738	1.8246					73	24	4	0	0	0	0.30098	1	13734	13734		23.79	10.175	1	65361000			6274	2595	3079	3099	7878	7878					0.14900373650425536
FQKKLYSL	8	Unmodified	_FQKKLYSL_					0	0	0		L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|34|1|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|34|1|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|34|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.8052245974541	2	513.80276	1025.59097	1.4551	0.00074761	4.2075	0.0021618	5.6626	0.0029094	513.8046629957503	80.232	0.41709	81.948	81.663	82.08	1.7167					33	13	3	0	0	0	0.87935	1	33639	33639		9.3474	1.4373	1	5684400			6275	7716	3080	3100	7879	7879					0.0791952134532039
FQLNDKHLKT	10	Unmodified	_FQLNDKHLKT_					0	0	0		CNBD1|p.I427Ffs*4|1|0.04|ENSG00000176571|chr8:87353759-87353760|-/CTTT|frameshift_variant;ENSG00000176571|ENST00000518476|CNBD1	CNBD1|p.I427Ffs*4|1|0.04|ENSG00000176571|chr8:87353759-87353760|-/CTTT|frameshift_variant	CNBD1|p.I427Ffs*4|1|0.04|ENSG00000176571|chr8:87353759-87353760|-/CTTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	622.3466674685478	2	622.343312	1242.67207	2.3287	0.0014492	2.1311	0.0013263	4.4598	0.0027755	622.344617346622	92.488	0.69278	92.488	92.228	92.921	0					60	22	3	0	0	0	0.80681	2	38679	38679;38719		13.042	4.4492	1	25683000			6276	316	3081	3101	7880;7881	7880					0.0604417731740341
FQRHHLGFYI	10	Unmodified	_FQRHHLGFYI_					0	0	0		nc|ENSG00000123243|Q86UX2-3|ITIH5;nc|ENSG00000123243|Q86UX2|ITIH5;ENSG00000123243|ENST00000397146|ITIH5	nc|ENSG00000123243|Q86UX2-3|ITIH5	nc|ENSG00000123243|Q86UX2-3|ITIH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.3539916872978	2	659.346189	1316.67783	2.6451	0.001744	4.3706	0.0028818	7.0157	0.0046258	659.3492860132307	75.116	0.34076	76.898	76.699	77.04	1.7817					22	10	3	0	0	0	0.6819	1	31482	31482		19.257	3.1079	1	2707000			6277	2185	3082	3102	7882	7882					0.03215320619756312
FQSCSFCKPKK	11	Unmodified	_FQSCSFCKPKK_					0	0	0		nc|ENSG00000166923|O60565-2|GREM1;ENSG00000166923|ENST00000651154|GREM1	nc|ENSG00000166923|O60565-2|GREM1	nc|ENSG00000166923|O60565-2|GREM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8829833865166	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.616	1	6.6959	6.1959	7.1959	0.079923								0	0	0	0.63775	1	2735	2735		0.094841	0	1				6278	3935	3083	3103	7883	7883					-0.012699271806923207
FQTIEMGDL	9	Unmodified	_FQTIEMGDL_					0	0	0			REV__tr|A0A553SKL2|A0A553SKL2_NIACIGlycine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=glyQPE=3SV=1	REV__tr|A0A553SKL2|A0A553SKL2_NIACIGlycine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=glyQPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2498657107353	2	527.2497	1052.48485	2.9294	0.0015445	-0.19152	-0.00010098	2.7378	0.0014435	527.249590328032	64.284	0.39881	65.692	65.466	65.865	1.4071					30	12	3	0	0	0	0.50272	1	27024	27024		6.7232	5.0705	1	2518900	+		6279	14959	3084	3104	7884	7884					-0.03929602282300948
FQVKLLYRMR	10	Unmodified	_FQVKLLYRMR_					0	0	0			REV__ENSG00000129484|ENST00000429687|PARP2	REV__ENSG00000129484|ENST00000429687|PARP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3984252810478	2	677.394825	1352.7751	2.4756	0.001677	0.12722	8.6176E-05	2.6028	0.0017631	677.3949411725933	83.276	1.3837	83.276	82.493	83.876	0					99	44	3	0	0	0	0.89803	1	34821	34821		0.40072	0.050084	1	1972200	+		6280	9757	3085	3105	7885	7885					0.112819665043844
FQVKLLYRMR	10	Unmodified	_FQVKLLYRMR_					0	0	0			REV__ENSG00000129484|ENST00000429687|PARP2	REV__ENSG00000129484|ENST00000429687|PARP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.8999511599541	2	677.394825	1352.7751	2.753	0.0018649	0.49116	0.00033271	3.2442	0.0021976	677.3951051592902	85.403	1.3251	85.403	84.589	85.914	0					130	41	4	0	0	0	0.89803	5	35343	35343;35395;35548;35651;35704		0.40072	0.40072	1	4030800	+		6281	9757	3085	3105	7886;7887;7888;7889;7890	7886					0.112819665043844
FQVKLLYRMR	10	Unmodified	_FQVKLLYRMR_					0	0	0			REV__ENSG00000129484|ENST00000429687|PARP2	REV__ENSG00000129484|ENST00000429687|PARP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3976928591728	2	677.394825	1352.7751	2.5056	0.0016973	-0.87649	-0.00059373	1.6291	0.0011036	677.3942794699842	85.883	0.75523	86.135	85.943	86.699	0.25227					42	24	2	0	0	0	0.89803	1	35888	35888		0.40072	0	1	2135800	+		6282	9757	3085	3105	7891	7891					0.112819665043844
FQWDSDNIYL	10	Unmodified	_FQWDSDNIYL_					0	0	0		nc|ENSG00000140474|Q6PHR2-2|ULK3;ENST00000570276.5_1_15:75132809-75135659:-|nuORF;nc|ENSG00000140474|Q6PHR2-3|ULK3;ENSG00000140474|ENST00000440863|ULK3;nc|ENSG00000140474|Q6PHR2-4|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	650.7965576052666	2	650.79586	1299.57717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.538	1	76.844	76.344	77.344	1.3063								0	0	0	0.014857	1	31705	31705		55.503	22.717	1				6283	2920	3086	3106	7892	7892					-0.06063800944434661
FQWDSDNIYL	10	Unmodified	_FQWDSDNIYL_					0	0	0		nc|ENSG00000140474|Q6PHR2-2|ULK3;ENST00000570276.5_1_15:75132809-75135659:-|nuORF;nc|ENSG00000140474|Q6PHR2-3|ULK3;ENSG00000140474|ENST00000440863|ULK3;nc|ENSG00000140474|Q6PHR2-4|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	nc|ENSG00000140474|Q6PHR2-2|ULK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.7982055544853	2	650.79586	1299.57717	2.8015	0.0018232	-0.38012	-0.00024738	2.4214	0.0015758	650.7960724889906	75.116	0.24847	76.898	76.76	77.009	1.7817					17	7	3	0	0	0	0.24244	1	31521	31521		43.772	26.659	1	1921300			6284	2920	3086	3106	7893	7893					-0.06063800944434661
FQYDHEAFL	9	Unmodified	_FQYDHEAFL_					0	0	0		ENSG00000049449|ENST00000054950|RCN1;ENST00000593644.1_1_19:50031828-50040290:+|nuORF;ENST00000398357.2_1_13:45965036-45965387:-|nuORF;ENSG00000142552|ENST00000270645|RCN3	ENSG00000049449|ENST00000054950|RCN1;ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.2698852419853	2	585.266739	1168.51892	2.1163	0.0012386	-0.006224	-3.6427E-06	2.1101	0.001235	585.2662815976302	48.858	0.15997	48.858	48.778	48.938	0					7	4	2	0	0	0	0.49082	1	20397	20397		15.847	1.9411	1	421890			6285	691;2999	3087	3107	7894	7894					-0.05859437799040279
FQYDHEAFL	9	Unmodified	_FQYDHEAFL_					0	0	0		ENSG00000049449|ENST00000054950|RCN1;ENST00000593644.1_1_19:50031828-50040290:+|nuORF;ENST00000398357.2_1_13:45965036-45965387:-|nuORF;ENSG00000142552|ENST00000270645|RCN3	ENSG00000049449|ENST00000054950|RCN1;ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.2665283083916	2	585.266739	1168.51892	1.6282	0.00095291	0.60968	0.00035682	2.2378	0.0013097	585.2674689185736	48.475	0.20979	48.805	48.643	48.853	0.33034					10	6	2	0	0	0	0.59203	1	20317	20317		11.64	1.5664	1	469030			6286	691;2999	3087	3107	7895	7895					-0.05859437799040279
FQYDHEAFL	9	Unmodified	_FQYDHEAFL_					0	0	0		ENSG00000049449|ENST00000054950|RCN1;ENST00000593644.1_1_19:50031828-50040290:+|nuORF;ENST00000398357.2_1_13:45965036-45965387:-|nuORF;ENSG00000142552|ENST00000270645|RCN3	ENSG00000049449|ENST00000054950|RCN1;ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.2685424685478	2	585.266739	1168.51892	2.092	0.0012244	0.41215	0.00024122	2.5042	0.0014656	585.2669849183015	47.011	0.25325	48.394	48.251	48.504	1.3825					12	7	2	0	0	0	0.30098	1	19685	19685		25.399	6.1423	1	739780			6287	691;2999	3087	3107	7896	7896					-0.05859437799040279
FQYDHEAFL	9	Unmodified	_FQYDHEAFL_					0	0	0		ENSG00000049449|ENST00000054950|RCN1;ENST00000593644.1_1_19:50031828-50040290:+|nuORF;ENST00000398357.2_1_13:45965036-45965387:-|nuORF;ENSG00000142552|ENST00000270645|RCN3	ENSG00000049449|ENST00000054950|RCN1;ENSG00000142552|ENST00000270645|RCN3	ENSG00000142552|ENST00000270645|RCN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.2681762576103	2	585.266739	1168.51892	1.7224	0.0010081	-0.74168	-0.00043408	0.9807	0.00057397	585.2663596331939	46.517	0.23784	48.488	48.379	48.617	1.9703					14	7	2	0	0	0	0.55689	1	19497	19497		13.042	6.3193	1	771930			6288	691;2999	3087	3107	7897	7897					-0.05859437799040279
FQYESKVFY	9	Unmodified	_FQYESKVFY_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.7957641482353	2	605.792589	1209.57063	2.0578	0.0012466	-0.49063	-0.00029722	1.5672	0.00094939	605.7923341399347	40.923	0.28695	42.816	42.673	42.96	1.8927					19	8	3	0	0	0	0.10473	1	17177	17177		47.749	32.91	1	1125500			6289	2359	3088	3108	7898	7898					-0.025776941051390168
FQYESKVFY	9	Unmodified	_FQYESKVFY_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	605.792589	1209.57063	2.2594	0.0013687	0.24129	0.00014617	2.5007	0.0015149	605.792733626263	41.316	0.38168	42.642	42.43	42.811	1.3254	-0.087088	0.00040236	NaN	47.749	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1021900			6290	2359	3088	3108							-0.025776941051390168
FRAQGASLP	9	Unmodified	_FRAQGASLP_					0	0	0		nc|ENSG00000089234|Q7Z569-2|BRAP	nc|ENSG00000089234|Q7Z569-2|BRAP	nc|ENSG00000089234|Q7Z569-2|BRAP	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.1746703982353	3	316.175015	945.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.953	1	19.146	18.646	19.646	0.19342								0	0	0	0.42693	1	7869	7869		1.1933	0	1				6291	7836	3089	3109	7899	7899					0.028283204745775947
FRFLPLKLF	9	Unmodified	_FRFLPLKLF_					0	0	0		ENST00000578190.5_1_17:62501363-62501429:-|nuORF	ENST00000578190.5_1_17:62501363-62501429:-|nuORF	ENST00000578190.5_1_17:62501363-62501429:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8683959841728	2	590.865695	1179.71684	4.6529	0.0027492	1.2979	0.00076691	5.9508	0.0035161	590.8663164590114	89.378	0.56226	90.782	90.456	91.019	1.4045					62	17	4	0	0	0	0.84531	1	37732	37732		2.3027	0	1	22115000			6292	7419	3090	3110	7900	7900					0.13416652921409877
FRFVKVKI	8	Unmodified	_FRFVKVKI_					0	0	0		PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant;ENSG00000280165|ENST00000409204|PCDH20	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2275268435478	3	346.22705	1035.65932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.931	1	60.931	60.431	61.431	0								0	0	0	1.0178	1	25407	25407		0.45834	0	1				6293	5482	3091	3111	7901	7901					0.1429181071584935
FRFVKVKI	8	Unmodified	_FRFVKVKI_					0	0	0		PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant;ENSG00000280165|ENST00000409204|PCDH20	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2279846072197	3	346.22705	1035.65932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.182	1	61.182	60.682	61.682	0								0	0	0	1.0178	1	25512	25512		0.45834	0	1				6294	5482	3091	3111	7902	7902					0.1429181071584935
FRFVKVKI	8	Unmodified	_FRFVKVKI_					0	0	0		PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant;ENSG00000280165|ENST00000409204|PCDH20	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2285034060478	3	346.22705	1035.65932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.421	1	61.421	60.921	61.921	0								0	0	0	1.0178	1	25610	25610		0.45834	0	1				6295	5482	3091	3111	7903	7903					0.1429181071584935
FRGNRATK	8	Unmodified	_FRGNRATK_					0	0	0		ENSG00000166183|ENST00000551177|ASPG;nc|ENSG00000166183|Q86U10-3|ASPG	ENSG00000166183|ENST00000551177|ASPG	ENSG00000166183|ENST00000551177|ASPG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.5154907107353	3	317.182392	948.525347	-3.4946	-0.0011084	0.45674	0.00014487	-3.0378	-0.00096355	317.18237839376775	12.483	0.091694	12.483	12.438	12.53	0					4	2	2	0	0	0	2.3239	1	5170	5170		6.2058	3.2105	1	423610			6296	3886	3092	3112	7904	7904					0.04902544942979148
FRHQKKKRH	9	Unmodified	_FRHQKKKRH_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2542602419853	3	422.254773	1263.74249	1.3538	0.00057163	-1.4627	-0.00061761	-0.1089	-4.5983E-05	422.25415268153387	90.454	0.45883	90.454	90.193	90.651	0					32	14	3	0	0	0	0.847	1	37775	37775		0.96228	0.18574	1	2190800	+		6297	11162	3093	3113	7905	7905					0.12116940216401417
FRHQKKKRH	9	Unmodified	_FRHQKKKRH_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2570373415947	3	422.254773	1263.74249	2.9156	0.0012311	-0.75656	-0.00031946	2.159	0.00091165	422.2548823448793	89.579	0.41666	89.803	89.583	90	0.22359					32	12	3	0	0	0	0.847	1	37495	37495		0.96228	0.18574	1	896490	+		6298	11162	3093	3113	7906	7906					0.12116940216401417
FRHQKKKRH	9	Unmodified	_FRHQKKKRH_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	422.254773	1263.74249	2.9156	0.0012311	-0.75656	-0.00031946	2.159	0.00091165	422.2548823448793	89.579	0.41666	89.803	89.583	90	0.22359	0.0084453	0.00028131	NaN	0.96228	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896490	+		6299	11162	3093	3113							0.12116940216401417
FRIHARPDL	9	Unmodified	_FRIHARPDL_					0	0	0		nc|ENSG00000213638|Q96EY9|ADAT3;ENSG00000213638|ENST00000329478|ADAT3	nc|ENSG00000213638|Q96EY9|ADAT3	nc|ENSG00000213638|Q96EY9|ADAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8175536990166	2	562.819807	1123.62506	2.0807	0.0011711	-2.3509	-0.0013231	-0.27021	-0.00015208	562.818111698192	71.984	0.5608	73.326	73.153	73.714	1.3415					39	17	3	0	0	0	0.37357	1	30192	30192		21.747	3.6003	1	4899100			6300	5224	3094	3114	7907	7907					0.06819362556939268
FRIKRFLAKKQ	11	Unmodified	_FRIKRFLAKKQ_					0	0	0		ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4829284548759	4	359.481857	1433.89832	0.726	0.00026099	1.1869	0.00042667	1.9129	0.00068766	359.4821179646642	27.451	1.1834	27.722	26.995	28.179	0.27119					153	38	5	0	0	0	1.039	1	11480	11480		0.45452	0.046251	1	28988000			6301	5102	3095	3115	7908	7908					0.19872965947138255
FRILKHFA	8	Unmodified	_FRILKHFA_					0	0	0			REV__ENSG00000135312|ENST00000369947|HTR1B	REV__ENSG00000135312|ENST00000369947|HTR1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	344.5455200076103	3	344.54315	1030.60762	1.9711	0.00067911	3.8269	0.0013185	5.798	0.0019976	344.54469779701674	83.789	0.36388	84.059	83.832	84.196	0.27029					25	11	3	0	0	0	0.89051	1	35018	35018		1.4819	0	1	1505300	+		6302	9932	3096	3116	7909	7909					0.09354067021945411
FRKIRRTPQRY	11	Unmodified	_FRKIRRTPQRY_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|58|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|58|2|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|58|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	380.2304260134697	4	380.978476	1519.8848	1.8086	0.00068905	3.9966	0.0015226	5.8052	0.0022117	380.98059130024694	72.327	0.3812	72.652	72.355	72.737	0.32494					17	11	2	0	0	0	0.14606	1	30142	30142		0.45452	0.35968	1	739810			6303	7770	3097	3117	7910	7910					0.14565108167926155
FRKKYGVQF	9	Unmodified	_FRKKYGVQF_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.8384277224541	2	586.832383	1171.65021	1.9755	0.0011593	4.3156	0.0025325	6.291	0.0036918	586.8359760946294	75.075	0.81691	75.075	74.494	75.311	0					39	25	2	0	0	0	0.83753	1	31223	31223		1.8442	0.51471	1	748310			6304	3077	3098	3118	7911	7911					0.07125417359520725
FRKKYGVQF	9	Unmodified	_FRKKYGVQF_					0	0	0		nc|ENSG00000144426|Q6ZS30-1|NBEAL1;nc|ENSG00000144426|Q6ZS30|NBEAL1;ENSG00000144426|ENST00000683969|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	586.832383	1171.65021	2.4885	0.0014603	5.4481	0.0031971	7.9366	0.0046574	586.8365790304556	74.762	1.0672	75.086	74.455	75.522	0.32464	0.0057439	0.00037718	NaN	1.8442	70	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	731560			6305	3077	3098	3118							0.07125417359520725
FRKLFAKK	8	Unmodified	_FRKLFAKK_					0	0	0			REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2225219607353	3	346.5588	1036.65457	1.4919	0.00051704	0.98809	0.00034243	2.48	0.00085947	346.55916651783355	66.673	0.86222	66.998	66.527	67.389	0.32449					47	19	3	0	0	0	0.89187	1	27759	27759		0.40072	0	1	3690800	+		6306	10738	3099	3119	7912	7912					0.13770926573079123
FRKLFAKK	8	Unmodified	_FRKLFAKK_					0	0	0			REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5583679080009	3	346.5588	1036.65457	0.0065879	2.2831E-06	1.4466	0.00050132	1.4532	0.00050361	346.5588637735247	21.36	0.4189	22.975	22.813	23.232	1.6158					25	13	2	0	0	0	0.89187	1	8915	8915		0.40072	0	1	568290	+		6307	10738	3099	3119	7913	7913					0.13770926573079123
FRKLFAKK	8	Unmodified	_FRKLFAKK_					0	0	0			REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	REV__ENST00000507823.5_1_5:174919260-174949462:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5593444705009	3	346.5588	1036.65457	0.088917	3.0815E-05	1.6547	0.00057345	1.7436	0.00060426	346.559397651492	23.433	0.37069	25.084	24.9	25.271	1.6511					20	11	2	0	0	0	0.89187	1	9828	9828		0.40072	0	1	542000	+		6308	10738	3099	3119	7914	7914					0.13770926573079123
FRMLVLGV	8	Unmodified	_FRMLVLGV_					0	0	0		nc|ENSG00000131233|P57773-2|GJA9;ENST00000522994.1_1_5:169412837-169427133:+|nuORF;ENSG00000131233|ENST00000357771|GJA9	nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.7833434939384	2	467.780773	933.546994	2.7684	0.001295	2.0032	0.00093704	4.7716	0.0022321	467.781710306031	61.237	0.37423	61.566	61.422	61.796	0.32974					22	11	2	0	0	0	0.88409	2	25625	25625;25745		6.3541	3.4649	1	2405500			6309	7869	3100	3120	7915;7916	7915					0.07756213647360255
FRPLKKIFKYY	11	Unmodified	_FRPLKKIFKYY_					0	0	0			REV__tr|A0A7D6ZVP6|A0A7D6ZVP6_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_05010PE=4SV=1	REV__tr|A0A7D6ZVP6|A0A7D6ZVP6_9CLOTDNAmismatchrepairproteinMutSOS=ClostridiumintestinaleOX=36845GN=HZF06_05010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.6365539431572	3	501.634257	1501.88094	3.176	0.0015932	0.04309	2.1616E-05	3.2191	0.0016148	501.634136526612	90.648	1.9841	90.857	90.049	92.033	0.20904					149	61	3	0	0	0	1.0395	1	38071	38071		0.08335	0.010087	1	2134000	+		6310	15735	3101	3121	7917	7917					0.15007625621501575
FRPVFKIKK	9	Unmodified	_FRPVFKIKK_					0	0	0			REV__tr|A0A7D6VXS9|A0A7D6VXS9_9CLOTAminoglycosidephosphotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13955PE=4SV=1	REV__tr|A0A7D6VXS9|A0A7D6VXS9_9CLOTAminoglycosidephosphotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13955PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2533447146416	3	388.253488	1161.73863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.262	1	33.087	32.587	33.587	1.8246								0	0	0	0.42693	1	13105	13105		0.26902	0	1		+		6311	15553	3102	3122	7918	7918					0.16423457669975505
FRRHRFVMKLL	11	Unmodified	_FRRHRFVMKLL_					0	0	0			REV__sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	REV__sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.6362487673759	3	501.634485	1501.88163	4.9743	0.0024953	-0.39666	-0.00019898	4.5776	0.0022963	501.63413464422814	89.949	1.2977	90.968	90.203	91.5	1.0199					110	40	3	0	0	0	1.0357	2	38007	37813;38007		0.50596	0	1	2075000	+		6312	14633	3103	3123	7919;7920	7920					0.15076141789586472
FRRHRFVMKLL	11	Unmodified	_FRRHRFVMKLL_					0	0	0			REV__sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	REV__sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.6367980837822	3	501.634485	1501.88163	4.1423	0.0020779	0.099883	5.0105E-05	4.2422	0.002128	501.63437579615766	89.684	1.8019	91.089	90.296	92.098	1.4045					112	56	3	0	0	0	1.0357	2	37549	37549;37795		0.50596	0	1	1527700	+		6313	14633	3103	3123	7921;7922	7921					0.15076141789586472
FRSATTSGAPG	11	Unmodified	_FRSATTSGAPG_					0	0	0		nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2;nc|ENSG00000188559|Q2PPJ7-2|RALGAPA2;ENSG00000188559|ENST00000202677|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2626830935478	2	526.261988	1050.50942	0.73735	0.00038804	-0.70416	-0.00037057	0.033191	1.7467E-05	526.2617094389869	14.766	0.34074	14.766	14.596	14.936	0					18	10	2	0	0	0	0.66268	1	6101	6101		19.362	0.98885	1	856290			6314	4868	3104	3124	7923	7923					-0.013812060845793894
FRSPGTRRL	9	Unmodified	_FRSPGTRRL_					0	0	0			REV__ENST00000343505.9_2_6:138768140-138794549:-|nuORF	REV__ENST00000343505.9_2_6:138768140-138794549:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3182861208916	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.8432	1	29953	29953		1.4819	0.51963	1	5427600	+		6315	12511	3105	3125	7924	7924					0.07954478414194455
FRYLKVLLRLY	11	Unmodified	_FRYLKVLLRLY_					0	0	0			REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	REV__ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	743.4621459841728	2	742.461022	1482.90749	2.1625	0.0016056	-0.9733	-0.00072264	1.1892	0.00088293	743.4607004007956	85.588	1.1508	86.715	86.412	87.563	1.1265					98	47	3	0	0	0	1.0395	1	36241	36241		0.30703	0	1	16834000	+		6316	8657	3106	3126	7925	7925					0.18535314512860168
FRYWQTCVSL	10	Unmodified	_FRYWQTCVSL_					0	0	0			REV__nc|ENSG00000060339|Q8IX12-2|CCAR1	REV__nc|ENSG00000060339|Q8IX12-2|CCAR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8824951052666	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2325	1	2.9809	2.4809	3.4809	0.7484								0	0	0	0.66254	1	926	926		0.15932	0	1		+		6317	8650	3107	3127	7926	7926					-0.016068539630396117
FSAFLEKEY	9	Unmodified	_FSAFLEKEY_					0	0	0		ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2786743044853	2	567.279315	1132.54408	1.8456	0.001047	-0.17333	-9.8325E-05	1.6723	0.00094864	567.2790950111525	42.536	0.18912	43.876	43.732	43.921	1.3399					10	5	2	0	0	0	0.16939	1	17824	17824		36.506	11.107	1	1206300			6318	1316	3108	3128	7927	7927					-0.016893829964601537
FSAFLEKEY	9	Unmodified	_FSAFLEKEY_					0	0	0		ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.2799560427666	2	567.279315	1132.54408	1.7377	0.00098575	-1.7396	-0.00098684	-0.0019209	-1.0897E-06	567.2784415977767	41.942	0.24835	43.863	43.763	44.011	1.9211					12	7	2	0	0	0	0.20244	1	17618	17618		32.786	7.3864	1	710740			6319	1316	3108	3128	7928	7928					-0.016893829964601537
FSAQGGGK	8	Unmodified	_FSAQGGGK_					0	0	0		tr|A0A7D6ZWZ1|A0A7D6ZWZ1_9CLOTAlanyl-tRNAeditingproteinAlaX-LOS=ClostridiumintestinaleOX=36845GN=HZF06_21065PE=4SV=1	tr|A0A7D6ZWZ1|A0A7D6ZWZ1_9CLOTAlanyl-tRNAeditingproteinAlaX-LOS=ClostridiumintestinaleOX=36845GN=HZF06_21065PE=4SV=1	tr|A0A7D6ZWZ1|A0A7D6ZWZ1_9CLOTAlanyl-tRNAeditingproteinAlaX-LOS=ClostridiumintestinaleOX=36845GN=HZF06_21065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.1910888552666	2	376.190303	750.366053	-0.22066	-8.3009E-05	1.6776	0.0006311	1.4569	0.00054809	376.19101878150343	11.502	0.15749	12.263	12.162	12.319	0.76165					7	4	2	0	0	0	0.88055	1	4790	4790		8.5933	2.8329	1	701790			6320	17181	3109	3129	7929	7929					-0.01911588404993836
FSDDALSLV	9	Unmodified	_FSDDALSLV_					0	0	0			REV__ENSG00000119698|ENST00000304338|PPP4R4	REV__ENSG00000119698|ENST00000304338|PPP4R4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	966.4792968630791	1	966.477854	965.470577	1.6202	0.0015659	-0.51857	-0.00050119	1.1016	0.0010647	966.4777162429059	67.78	0.31492	67.78	67.601	67.915	0					19	9	3	0	0	0	0.24063	1	28263	28263		28.487	6.7402	1	866330	+		6321	9551	3110	3130	7930	7930					-0.013539314389504398
FSDDALSLV	9	Unmodified	_FSDDALSLV_					0	0	0			REV__ENSG00000119698|ENST00000304338|PPP4R4	REV__ENSG00000119698|ENST00000304338|PPP4R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	966.4795410037041	1	966.477854	965.470577	1.4986	0.0014484	1.121	0.0010834	2.6196	0.0025318	966.4781201233687	66.366	0.42691	67.755	67.507	67.934	1.3888					37	13	4	0	0	0	0.12174	1	27812	27812		42.095	9.7891	1	5567600	+		6322	9551	3110	3130	7931	7931					-0.013539314389504398
FSDDALSLV	9	Unmodified	_FSDDALSLV_					0	0	0			REV__ENSG00000119698|ENST00000304338|PPP4R4	REV__ENSG00000119698|ENST00000304338|PPP4R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	966.4797851443291	1	966.477854	965.470577	1.6573	0.0016017	1.2178	0.001177	2.8751	0.0027787	966.4778933785367	65.967	0.42764	67.875	67.649	68.076	1.9085					31	13	4	0	0	0	0.10993	2	27655	27655;27705		46.021	0	1	5035200	+		6323	9551	3110	3130	7932;7933	7932					-0.013539314389504398
FSDRGHAEM	9	Unmodified	_FSDRGHAEM_					0	0	0		PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion;PPP1CB-PLB1|1|fusion;PPP1CB-PLB1|2|fusion;nc|ENSG00000163803|Q6P1J6-5|PLB1;nc|ENSG00000163803|Q6P1J6-3|PLB1;ENSG00000163803|ENST00000327757|PLB1	PPP1CB-PLB1|3|fusion	PPP1CB-PLB1|3|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2244750857353	2	525.227091	1048.43963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22	1	23.177	22.677	23.677	1.177								0	0	0	0.42693	1	9192	9192		3.2813	0.70383	1				6324	8062	3111	3131	7934	7934					-0.08265408024840326
FSDTGNFGF	9	Unmodified	_FSDTGNFGF_					0	0	0		nc|ENSG00000142676|P62913-2|RPL11;ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF	nc|ENSG00000142676|P62913-2|RPL11	nc|ENSG00000142676|P62913-2|RPL11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.4138671755791	1	991.415588	990.408311	2.7371	0.0027136	-1.2317	-0.0012211	1.5055	0.0014925	991.4134108284225	55.455	0.29063	56.865	56.647	56.937	1.4099					15	9	2	0	0	0	0.0054014	1	23203	23203		120.45	66.875	1	1742300			6325	3003	3112	3132	7935	7935					-0.08727657787278531
FSDTGNFGF	9	Unmodified	_FSDTGNFGF_					0	0	0		nc|ENSG00000142676|P62913-2|RPL11;ENSG00000142676|ENST00000643754|RPL11;ENST00000482370.1_1_1:24019089-24022860:+|nuORF	nc|ENSG00000142676|P62913-2|RPL11	nc|ENSG00000142676|P62913-2|RPL11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	991.4178954958916	1	991.415588	990.408311	1.128	0.0011184	-0.50523	-0.00050089	0.62281	0.00061747	991.4147423105662	55.006	0.296	56.974	56.809	57.105	1.9684					15	9	2	0	0	0	0.013238	1	23057	23057		104.8	60.392	1	1939000			6326	3003	3112	3132	7936	7936					-0.08727657787278531
FSEPLLNYHF	10	Unmodified	_FSEPLLNYHF_					0	0	0			REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|231|3|anti-sense	REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|231|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.8775817751884	3	422.876634	1265.60807	0.80496	0.0003404	0.54491	0.00023043	1.3499	0.00057083	422.87684997166104	29.662	1.0121	31.461	31.234	32.246	1.7987					82	32	4	0	0	0	0.87762	1	12656	12656		3.8763	1.7903	1	11706000	+		6327	14268	3113	3133	7937	7937					-0.014106028395417525
FSFDYIVKW	9	Unmodified	_FSFDYIVKW_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.8073608279228	2	602.8055	1203.59645	2.671	0.0016101	0.50893	0.00030678	3.1799	0.0019169	602.805727100495	78.489	0.36665	79.756	79.573	79.939	1.2668					31	11	3	0	0	0	0.040497	2	32936	32936;32990		75.761	45.124	1	2718100			6328	2446	3114	3134	7938;7939	7938					0.002792001371517472
FSFDYIVKW	9	Unmodified	_FSFDYIVKW_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.8084594607353	2	602.8055	1203.59645	1.7699	0.0010669	1.1195	0.00067482	2.8894	0.0017417	602.8063235100187	77.99	0.46791	79.741	79.526	79.994	1.7514					33	14	3	0	0	0	0.031145	2	32689	32689;32741		85.642	56.261	1	2347100			6329	2446	3114	3134	7940;7941	7940					0.002792001371517472
FSFFFSEFL	9	Unmodified	_FSFFFSEFL_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|175|3|anti-sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|175|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.7794067263603	2	585.778951	1169.54335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.818	1	67.217	66.717	67.717	1.3989								0	0	0	0.36184	1	27605	27605		12.532	0.89125	1		+		6330	14247	3115	3135	7942	7942					-0.0346417764551461
FSFLLSLFCF	10	Unmodified	_FSFLLSLFCF_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|172|1|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|172|1|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|172|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	612.7717162966728	2	612.312103	1222.60965	1.1636	0.00071251	-3.2575	-0.0019946	-2.0939	-0.0012821	612.3092793134914	48.647	0.18372	50.035	49.895	50.079	1.388					7	5	2	0	0	0	0.12471	1	20316	20316		13.906	3.0821	1	451570			6331	7734	3116	3136	7943	7943					0.007253149248754198
FSFPGELLM	9	Unmodified	_FSFPGELLM_					0	0	0		SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant;SLC1A6|p.I396Mfs*51|1|0.01|ENSG00000105143|chr19:14954311-14954312|-/CAACTCACTACTC|frameshift_variant;SLC1A6|p.I396Tfs*122|1|0.28|ENSG00000105143|chr19:14954312-14954313|-/CTCCTCTCTCTCTCTCCCAGGCTGAAGTGCAG|frameshift_variant;ENSG00000105143|ENST00000594383|SLC1A6;ENST00000502864.5_1_5:36608606-36630112:+|nuORF;nc|ENSG00000105143|P48664-2|SLC1A6;nc|ENSG00000079215|P43003-2|SLC1A3;ENSG00000079215|ENST00000265113|SLC1A3	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7613403201103	2	520.759704	1039.50485	5.0167	0.0026125	-0.42587	-0.00022177	4.5908	0.0023907	520.7596780712548	89.828	0.62225	90.847	90.556	91.178	1.0199					52	19	3	0	0	0	0.1735	2	37797	37797;37846		36.044	3.9272	1	6670400			6332	1498	3117	3137	7944;7945	7944					-0.013318065517069044
FSFPGELLM	9	Unmodified	_FSFPGELLM_					0	0	0		SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant;SLC1A6|p.I396Mfs*51|1|0.01|ENSG00000105143|chr19:14954311-14954312|-/CAACTCACTACTC|frameshift_variant;SLC1A6|p.I396Tfs*122|1|0.28|ENSG00000105143|chr19:14954312-14954313|-/CTCCTCTCTCTCTCTCCCAGGCTGAAGTGCAG|frameshift_variant;ENSG00000105143|ENST00000594383|SLC1A6;ENST00000502864.5_1_5:36608606-36630112:+|nuORF;nc|ENSG00000105143|P48664-2|SLC1A6;nc|ENSG00000079215|P43003-2|SLC1A3;ENSG00000079215|ENST00000265113|SLC1A3	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1040.514941394329	1	1040.51213	1039.50485	4.4809	0.0046624	0.94284	0.00098104	5.4238	0.0056435	1040.5132085335947	89.796	0.68483	90.815	90.493	91.178	1.0199					35	21	2	0	0	0	0.031324	1	37872	37872		85.357	24.967	1	4307000			6333	1498	3117	3137	7946	7946					-0.013318065517069044
FSFPGELLM	9	Unmodified	_FSFPGELLM_					0	0	0		SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant;SLC1A6|p.I396Mfs*51|1|0.01|ENSG00000105143|chr19:14954311-14954312|-/CAACTCACTACTC|frameshift_variant;SLC1A6|p.I396Tfs*122|1|0.28|ENSG00000105143|chr19:14954312-14954313|-/CTCCTCTCTCTCTCTCCCAGGCTGAAGTGCAG|frameshift_variant;ENSG00000105143|ENST00000594383|SLC1A6;ENST00000502864.5_1_5:36608606-36630112:+|nuORF;nc|ENSG00000105143|P48664-2|SLC1A6;nc|ENSG00000079215|P43003-2|SLC1A3;ENSG00000079215|ENST00000265113|SLC1A3	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1040.520800769329	1	1040.51213	1039.50485	5.6545	0.0058835	-2.2647	-0.0023564	3.3898	0.0035271	1040.5115195005217	89.305	0.68815	90.709	90.425	91.113	1.4044					38	21	3	0	0	0	0.029093	4	37639	37587;37639;37686;37730		88.904	44.497	1	3706400			6334	1498	3117	3137	7947;7948;7949;7950	7948					-0.013318065517069044
FSFPGELLM	9	Unmodified	_FSFPGELLM_					0	0	0		SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant;SLC1A6|p.I396Mfs*51|1|0.01|ENSG00000105143|chr19:14954311-14954312|-/CAACTCACTACTC|frameshift_variant;SLC1A6|p.I396Tfs*122|1|0.28|ENSG00000105143|chr19:14954312-14954313|-/CTCCTCTCTCTCTCTCCCAGGCTGAAGTGCAG|frameshift_variant;ENSG00000105143|ENST00000594383|SLC1A6;ENST00000502864.5_1_5:36608606-36630112:+|nuORF;nc|ENSG00000105143|P48664-2|SLC1A6;nc|ENSG00000079215|P43003-2|SLC1A3;ENSG00000079215|ENST00000265113|SLC1A3	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7612792849541	2	520.759704	1039.50485	4.5924	0.0023915	-1.0818	-0.00056337	3.5106	0.0018282	520.7591577083358	89.315	0.65685	90.719	90.425	91.081	1.4044					54	20	4	0	0	0	0.12174	2	37689	37598;37689		42.095	7.9072	1	4378100			6335	1498	3117	3137	7951;7952	7952					-0.013318065517069044
FSFPHKFEI	9	Unmodified	_FSFPHKFEI_					0	0	0		SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant;ENSG00000197818|ENST00000361573|SLC9A8;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1536437869072	3	384.53432	1150.58113	-0.012718	-4.8905E-06	1.2054	0.00046352	1.1927	0.00045863	384.53497744727963	53.217	0.38436	54.618	54.281	54.665	1.4005					26	11	3	0	0	0	0.11891	1	22234	22234		1.1933	0.92432	1	3256300			6336	15965	3118	3138	7953	7953					0.01186333339956036
FSFPHKFEI	9	Unmodified	_FSFPHKFEI_					0	0	0		SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant;ENSG00000197818|ENST00000361573|SLC9A8;nc|ENSG00000197818|Q9Y2E8-2|SLC9A8	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1535217165947	3	384.53432	1150.58113	0.88321	0.00033962	0.029376	1.1296E-05	0.91259	0.00035092	384.53429620903466	52.613	0.47898	54.585	54.257	54.736	1.9722					26	14	2	0	0	0	0.11891	1	22007	22007		0.26902	0	1	1913500			6337	15965	3118	3138	7954	7954					0.01186333339956036
FSFRGTENFI	10	Unmodified	_FSFRGTENFI_					0	0	0			REV__nc|ENSG00000074696|Q9P035-2|HACD3	REV__nc|ENSG00000074696|Q9P035-2|HACD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3013183474541	2	609.301113	1216.58767	2.19	0.0013343	-0.1689	-0.00010291	2.0211	0.0012314	609.3010342611278	50.454	0.36881	51.848	51.678	52.047	1.3938					35	11	4	0	0	0	0.40874	1	21088	21088		32.786	0.4802	1	4859400	+		6338	8753	3119	3139	7955	7955					-0.011957734993529812
FSFRGTENFI	10	Unmodified	_FSFRGTENFI_					0	0	0			REV__nc|ENSG00000074696|Q9P035-2|HACD3	REV__nc|ENSG00000074696|Q9P035-2|HACD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3022338747978	2	609.301113	1216.58767	1.6281	0.000992	0.70726	0.00043094	2.3354	0.0014229	609.3015234594113	49.953	0.34263	51.93	51.727	52.07	1.9772					30	10	4	0	0	0	0.28905	1	20944	20944		39.95	7.6442	1	4913000	+		6339	8753	3119	3139	7956	7956					-0.011957734993529812
FSFRGVKVY	9	Unmodified	_FSFRGVKVY_					0	0	0		ENSG00000140564|ENST00000268171|FURIN	ENSG00000140564|ENST00000268171|FURIN	ENSG00000140564|ENST00000268171|FURIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2064391970634	3	368.206315	1101.59712	1.301	0.00047902	-1.1799	-0.00043444	0.12108	4.4584E-05	368.2059086192409	40.433	0.46085	41.743	41.547	42.008	1.3102					34	14	3	0	0	0	0.28863	2	16950	16950;17002		26.021	6.1324	1	5118800			6340	2926	3120	3140	7957;7958	7957					0.05038039576857045
FSFRGVKVY	9	Unmodified	_FSFRGVKVY_					0	0	0		ENSG00000140564|ENST00000268171|FURIN	ENSG00000140564|ENST00000268171|FURIN	ENSG00000140564|ENST00000268171|FURIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2071411013603	3	368.206315	1101.59712	1.5924	0.00058632	0.077929	2.8694E-05	1.6703	0.00061501	368.2063444386939	40.078	0.43528	41.94	41.707	42.143	1.8624					40	13	4	0	0	0	0.42097	1	16833	16833		19.362	4.5237	1	6512800			6341	2926	3120	3140	7959	7959					0.05038039576857045
FSFRYQQEL	9	Unmodified	_FSFRYQQEL_					0	0	0		ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3018676638603	2	609.301113	1216.58767	2.19	0.0013343	-0.1689	-0.00010291	2.0211	0.0012314	609.3010342611278	50.454	0.36881	51.848	51.678	52.047	1.3938					35	11	4	0	0	0	0.10294	1	21135	21135		48.346	0.59716	1	4859400			6342	4707	3121	3141	7960	7960					-0.011957734993529812
FSFRYQQEL	9	Unmodified	_FSFRYQQEL_					0	0	0		ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	ENSG00000184743|ENST00000398868|ATL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	609.301113	1216.58767	1.6281	0.000992	0.70726	0.00043094	2.3354	0.0014229	609.3015234594113	49.953	0.34263	51.93	51.727	52.07	1.9772	0.041271	0.00060754	NaN	48.346	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4913000			6343	4707	3121	3141							-0.011957734993529812
FSFSGVQLL	9	Unmodified	_FSFSGVQLL_					0	0	0		ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.2737609744072	2	499.271293	996.528032	2.8066	0.0014013	4.3721	0.0021829	7.1787	0.0035841	499.27248330074525	82.488	0.34002	84.158	84.017	84.358	1.67					13	10	2	0	0	0	0.12174	1	34610	34610		42.095	0	1	4285100			6344	7452	3122	3142	7961	7961					0.029629555573023936
FSFSGVQLL	9	Unmodified	_FSFSGVQLL_					0	0	0		ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	997.5411865115166	1	997.535309	996.528032	3.3321	0.0033238	-0.42245	-0.0004214	2.9096	0.0029024	997.5362129409914	82.534	0.27688	84.204	84.017	84.294	1.67					14	8	3	0	0	0	0.037761	1	34636	34636		78.149	7.0158	1	2715100			6345	7452	3122	3142	7962	7962					0.029629555573023936
FSFSGVQLL	9	Unmodified	_FSFSGVQLL_					0	0	0		ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	ENST00000586035.1_1_19:33072468-33072585:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	997.535309	996.528032	3.7001	0.003691	-1.1878	-0.0011849	2.5123	0.0025061	997.5344256214468	83.002	0.30408	84.215	84.046	84.35	1.2125	0.0052846	-0.00019954	NaN	78.149	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3192700			6346	7452	3122	3142							0.029629555573023936
FSGSPPPDVIW	11	Unmodified	_FSGSPPPDVIW_					0	0	0		ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	ENSG00000179057|ENST00000513874|IGSF22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.2985107302666	2	601.298039	1200.58152	1.7348	0.0010431	0.10184	6.1234E-05	1.8366	0.0011043	601.2979980241339	49.673	0.53385	51.651	51.349	51.883	1.9772					49	16	4	0	0	0	0.54522	1	20879	20879		22.736	1.1993	1	10604000			6347	4504	3123	3143	7963	7963					-0.010742917308789401
FSGSSDWDNL	10	Unmodified	_FSGSSDWDNL_					0	0	0		nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;ENSG00000117155|ENST00000342203|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.2363769412041	2	564.235635	1126.45672	4.2244	0.0023836	-1.1729	-0.00066179	3.0515	0.0017218	564.2347738423895	93.012	0.29494	93.883	93.67	93.965	0.87176					14	8	2	0	0	0	0.87699	1	39151	39151		3.9444	0.3479	1	717820			6348	2001	3124	3144	7964	7964					-0.1014520893804729
FSGSSDWDNL	10	Unmodified	_FSGSSDWDNL_					0	0	0		nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;ENSG00000117155|ENST00000342203|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	564.235635	1126.45672	4.2244	0.0023836	-1.1729	-0.00066179	3.0515	0.0017218	564.2347738423895	93.012	0.29494	93.883	93.67	93.965	0.87176	0.0049808	-9.3465E-05	NaN	3.9444	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	717820			6349	2001	3124	3144							-0.1014520893804729
FSGSSDWDNL	10	Unmodified	_FSGSSDWDNL_					0	0	0		nc|ENSG00000117155|Q9Y2D8-2|SSX2IP;nc|ENSG00000117155|Q9Y2D8-3|SSX2IP;ENSG00000117155|ENST00000342203|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	nc|ENSG00000117155|Q9Y2D8-2|SSX2IP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.235635	1126.45672	3.2738	0.0018472	-0.8172	-0.00046109	2.4566	0.0013861	564.2351892960726	92.547	0.1928	93.873	93.732	93.925	1.3269	-0.0049808	0.00030792	NaN	3.9444	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484010			6350	2001	3124	3144							-0.1014520893804729
FSGYDVKF	8	Unmodified	_FSGYDVKF_					0	0	0			REV__MAP3K4|p.L1291Qfs*13|1|0.15|ENSG00000085511|chr6:161106528-161106555|CTAGGACCCATAGAAGCTATCCAGAAGT/-|frameshift_variant	REV__MAP3K4|p.L1291Qfs*13|1|0.15|ENSG00000085511|chr6:161106528-161106555|CTAGGACCCATAGAAGCTATCCAGAAGT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	481.2059509158134	2	481.734543	961.454533	2.4545	0.0011824	0.6796	0.00032738	3.1341	0.0015098	481.73481867570723	73.258	0.18714	75.068	75.02	75.207	1.8101					7	5	2	0	0	0	2.3239	1	30750	30750		18.135	6.4947	1	551720	+		6351	8852	3125	3145	7965	7965					-0.02773592885182552
FSHPYLLWVS	10	Unmodified	_FSHPYLLWVS_					0	0	0		ENST00000367999.8_1_1:161136243-161136698:+|nuORF	ENST00000367999.8_1_1:161136243-161136698:+|nuORF	ENST00000367999.8_1_1:161136243-161136698:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	416.8867980837822	3	416.885241	1247.63389	0.78471	0.00032713	2.6344	0.0010982	3.4191	0.0014254	416.88648415808996	30.155	0.33948	31.97	31.8	32.139	1.8151					31	10	4	0	0	0	0.85124	1	12649	12649		3.5871	0	1	2850600			6352	6076	3126	3146	7966	7966					0.01998291402742325
FSIFYKYL	8	Unmodified	_FSIFYKYL_					0	0	0			REV__TUBGCP5|p.S675Lfs*14|1|0.04|ENSG00000275835|chr15:23010066-23010067|-/CTTGCTCTGTCGCCCAGGCTGGAGTGCAG|frameshift_variant	REV__TUBGCP5|p.S675Lfs*14|1|0.04|ENSG00000275835|chr15:23010066-23010067|-/CTTGCTCTGTCGCCCAGGCTGGAGTGCAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	540.3326293826103	2	540.791861	1079.56917	1.5335	0.00082929	-3.0168	-0.0016314	-1.4833	-0.00080215	540.7898848429807	69.123	0.30806	70.976	70.828	71.136	1.853					16	9	2	0	0	0	2.3239	1	29020	29020		9.3474	0.75416	1	692690	+		6353	12016	3127	3147	7967	7967					0.03256716596752085
FSILTPGPNY	10	Unmodified	_FSILTPGPNY_					0	0	0		USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant;USH2A|p.Y4273Cfs*19|1|0.36|ENSG00000042781|chr1:215675092-215675093|AT/-|frameshift_variant;ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A;nc|ENSG00000042781|O75445-2|USH2A;USH2A|p.F2516Rfs*28|1|0.25|ENSG00000042781|chr1:215900123-215900124|-/AAGGTTATTGTCACTAAACAACAAGTAAATAAGGGAGGCTCATTTCT|frameshift_variant	USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7892333865166	2	554.787307	1107.56006	2.4076	0.0013357	1.544	0.00085662	3.9516	0.0021923	554.7880467620201	59.491	0.43775	60.91	60.708	61.146	1.4196					29	13	3	0	0	0	0.81324	1	24965	24965		10.824	1.4765	1	4193300			6354	666	3128	3148	7968	7968					0.010583232404314913
FSKFSISLP	9	Unmodified	_FSKFSISLP_					0	0	0		L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|202|1|anti-sense	L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|202|1|anti-sense	L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|202|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1025.570239245892	1	1025.56661	1024.55933	2.9836	0.0030599	0.63862	0.00065495	3.6222	0.0037148	1025.5666223169728	87.71	0.30616	87.945	87.763	88.069	0.2347					20	9	3	0	0	0	0.30098	1	36789	36789		25.399	2.2509	1	1736000			6355	7672	3129	3149	7969	7969					0.04803528591378381
FSKGCHSCEF	10	Unmodified	_FSKGCHSCEF_					0	0	0			REV__ENSG00000130818|ENST00000253115|ZNF426	REV__ENSG00000130818|ENST00000253115|ZNF426	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7314330935478	2	572.731151	1143.44775	2.5485	0.0014596	-1.4291	-0.00081849	1.1194	0.0006411	572.7302902281822	59.064	0.38102	61.033	60.844	61.225	1.969					33	11	4	0	0	0	0.85124	1	24823	24823		6.7232	1.9672	1	3053000	+		6356	9805	3130	3150	7970	7970					-0.11823597099737526
FSKTWIEV	8	Unmodified	_FSKTWIEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2724792361259	2	505.271293	1008.52803	2.1569	0.0010898	-0.42952	-0.00021702	1.7273	0.00087278	505.27132859618104	46.724	0.50306	48.107	47.811	48.314	1.3825					45	15	4	0	0	0	0.059664	3	19574	19525;19574;19612		103.35	53.421	1	5395600			6357	733;793	3131	3151	7971;7972;7973	7972					0.02410955557274974
FSKTWIEV	8	Unmodified	_FSKTWIEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2726013064384	2	505.271293	1008.52803	1.4042	0.0007095	0.16201	8.1858E-05	1.5662	0.00079136	505.271705669058	46.279	0.46687	48.249	47.943	48.41	1.9703					41	14	4	0	0	0	0.066051	3	19374	19327;19374;19425		99.755	49.822	1	4703100			6358	733;793	3131	3151	7974;7975;7976	7975					0.02410955557274974
FSLCEWVV	8	Unmodified	_FSLCEWVV_					0	0	0		nc|ENSG00000153789|Q6ZTR7|CIBAR2;ENSG00000153789|ENST00000539556|CIBAR2	nc|ENSG00000153789|Q6ZTR7|CIBAR2	nc|ENSG00000153789|Q6ZTR7|CIBAR2	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1605407595634	3	328.161606	981.462989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7934	1	4.417	3.917	4.917	0.62362								0	0	0	1.0178	1	1565	1565		0.45834	0	1				6359	3364	3132	3152	7977	7977					-0.02848362240217739
FSLGVPRLIG	10	Unmodified	_FSLGVPRLIG_					0	0	0		ENSG00000111639|ENST00000229238|MRPL51	ENSG00000111639|ENST00000229238|MRPL51	ENSG00000111639|ENST00000229238|MRPL51	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	353.1996642947197	3	353.550082	1057.62842	-1.195	-0.00042248	-0.71822	-0.00025393	-1.9132	-0.00067641	353.54987861211066	14.338	0.16387	15.108	15.045	15.209	0.76937					8	6	2	0	0	0	0.1249	1	5939	5939		12.873	8.5434	1	505500			6360	1745	3133	3153	7978	7978					0.10190612610927019
FSLGVPRLIG	10	Unmodified	_FSLGVPRLIG_					0	0	0		ENSG00000111639|ENST00000229238|MRPL51	ENSG00000111639|ENST00000229238|MRPL51	ENSG00000111639|ENST00000229238|MRPL51	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	353.550082	1057.62842	-0.24544	-8.6775E-05	-2.2971	-0.00081215	-2.5426	-0.00089893	353.54908177663526	14.261	0.20271	15.158	15.074	15.277	0.89664	0.025054	-0.00084783	NaN	12.873	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	496820			6361	1745	3133	3153							0.10190612610927019
FSLHGSSSEF	10	Unmodified	_FSLHGSSSEF_					0	0	0			REV__nc|ENSG00000174837|Q14246-2|ADGRE1	REV__nc|ENSG00000174837|Q14246-2|ADGRE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2491332888603	2	549.248546	1096.48254	2.5115	0.0013794	-1.3913	-0.00076416	1.1202	0.00061528	549.2478222786887	79.347	0.34502	80.614	80.439	80.785	1.2668					17	10	2	0	0	0	0.35292	1	33329	33329		36.127	3.3413	1	1950700	+		6362	11135	3134	3154	7979	7979					-0.06184314695747162
FSLHGSSSEF	10	Unmodified	_FSLHGSSSEF_					0	0	0			REV__nc|ENSG00000174837|Q14246-2|ADGRE1	REV__nc|ENSG00000174837|Q14246-2|ADGRE1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	549.248546	1096.48254	2.5115	0.0013794	-1.3913	-0.00076416	1.1202	0.00061528	549.2478222786887	79.347	0.34502	80.614	80.439	80.785	1.2668	0.0056287	-0.00025521	NaN	36.127	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1950700	+		6363	11135	3134	3154							-0.06184314695747162
FSLHGSSSEF	10	Unmodified	_FSLHGSSSEF_					0	0	0			REV__nc|ENSG00000174837|Q14246-2|ADGRE1	REV__nc|ENSG00000174837|Q14246-2|ADGRE1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.248546	1096.48254	2.0909	0.0011484	-0.87946	-0.00048304	1.2115	0.0006654	549.2476657264486	78.867	0.40096	80.603	80.413	80.814	1.735	-0.0056287	0.00030703	NaN	36.127	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1708300	+		6364	11135	3134	3154							-0.06184314695747162
FSLSVFLLS	9	Unmodified	_FSLSVFLLS_					0	0	0			REV__ENST00000298316.6_1_14:50361063-50361216:+|nuORF	REV__ENST00000298316.6_1_14:50361063-50361216:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.576464831829	1	1012.57136	1011.56408	1.6203	0.0016406	0.50089	0.00050719	2.1212	0.0021478	1012.5708377574109	77.114	0.4494	78.865	78.623	79.073	1.7514					22	13	2	0	0	0	0.27148	1	32299	32299		26.884	0.54238	1	1087800	+		6365	12303	3135	3155	7980	7980					0.058764127341419226
FSMYKPITY	9	Unmodified	_FSMYKPITY_					0	0	0		nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;ENSG00000134779|ENST00000334295|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.2872802615166	2	575.286085	1148.55762	2.1944	0.0012624	-0.58212	-0.00033488	1.6122	0.0009275	575.2868472130214	45.355	0.25857	46.721	46.596	46.854	1.3653					16	7	3	0	0	0	0.3091	1	18996	18996		24.991	11.483	1	895970			6366	2635	3136	3156	7981	7981					-0.010718484888911917
FSMYKPITY	9	Unmodified	_FSMYKPITY_					0	0	0		nc|ENSG00000134779|Q68CL5-1|TPGS2;nc|ENSG00000134779|Q68CL5-4|TPGS2;ENSG00000134779|ENST00000334295|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	nc|ENSG00000134779|Q68CL5-1|TPGS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2892333865166	2	575.286085	1148.55762	1.9053	0.0010961	1.2935	0.00074416	3.1989	0.0018403	575.2874594836242	44.823	0.44452	46.783	46.608	47.052	1.9596					24	13	3	0	0	0	0.51189	2	18767	18767;18833		14.838	9.6076	1	804290			6367	2635	3136	3156	7982;7983	7982					-0.010718484888911917
FSNDIPHVV	9	Unmodified	_FSNDIPHVV_					0	0	0		ENST00000505303.5_1_5:110428043-110447004:+|nuORF;ENSG00000134987|ENST00000513710|WDR36;nc|ENSG00000134987|Q8NI36|WDR36;ENST00000515784.1_1_5:110428046-110430680:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2689697146416	2	514.263999	1026.51345	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.026	1	39.31	38.81	39.81	1.284								0	0	0	0.22909	1	15958	15958		24.021	0.87215	1				6368	2644	3137	3157	7984	7984					0.0012488340912568674
FSNFSFYFL	9	Unmodified	_FSNFSFYFL_					0	0	0			REV__ENST00000572856.1_1_18:3607136-3607283:+|nuORF	REV__ENST00000572856.1_1_18:3607136-3607283:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	585.7794067263603	2	586.276575	1170.5386	2.4013	0.0014078	0.6263	0.00036718	3.0276	0.001775	586.2778739391703	65.768	0.58203	67.166	66.817	67.399	1.3989					45	18	3	0	0	0	0.10306	1	27605	27605		19.439	8.6151	1	1178100	+		6369	13971	3138	3158	7985	7985					-0.03985061788284838
FSNPETRAR	9	Unmodified	_FSNPETRAR_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.7707397341728	2	539.275429	1076.53631	2.6256	0.0014159	-4.3128	-0.0023258	-1.6872	-0.00090988	539.2717193274476	76.141	0.36039	77.435	77.128	77.488	1.2938					18	11	2	0	0	0	0.098208	1	31971	31971		18.146	0	1	3101000	+		6370	11315	3139	3159	7986	7986					0.0010990252660576516
FSNQKRKF	8	Unmodified	_FSNQKRKF_					0	0	0		tr|A0A7D6VS50|A0A7D6VS50_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14560PE=4SV=1	tr|A0A7D6VS50|A0A7D6VS50_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14560PE=4SV=1	tr|A0A7D6VS50|A0A7D6VS50_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14560PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.2634765505791	2	527.793258	1053.57196	2.93	0.0015464	0.54279	0.00028648	3.4728	0.0018329	527.7935504090609	62.567	0.2336	63.981	63.928	64.162	1.4134					11	7	2	0	0	0	2.3239	1	26317	26317		30.225	12.09	1	1415000			6371	16856	3140	3160	7987	7987					0.04731984774275588
FSNRGRPKK	9	Unmodified	_FSNRGRPKK_					0	0	0			REV__CTDSP2|p.I37S|1|0.16|ENSG00000175215|chr12:57829551-57829551|A/C|missense_variant	REV__CTDSP2|p.I37S|1|0.16|ENSG00000175215|chr12:57829551-57829551|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3181030154228	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.83753	1	30091	30091		1.8442	0	1	5427600	+		6372	8413	3141	3161	7988	7988					0.07954478414194455
FSNRYASTVL	10	Unmodified	_FSNRYASTVL_					0	0	0			REV__tr|A0A7D7ACE5|A0A7D7ACE5_9CLOTCDP-glucose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=rfbGPE=4SV=1	REV__tr|A0A7D7ACE5|A0A7D7ACE5_9CLOTCDP-glucose4,6-dehydrataseOS=ClostridiumintestinaleOX=36845GN=rfbGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3018676638603	2	579.301113	1156.58767	2.669	0.0015462	1.5892	0.00092065	4.2582	0.0024668	579.3013300748761	72.361	0.83295	74.171	73.71	74.543	1.8101					55	26	3	0	0	0	0.77604	1	30423	30423		14.838	0.25658	1	3757300	+		6373	15901	3142	3162	7989	7989					0.015642265006590605
FSNSGSRIT	9	Unmodified	_FSNSGSRIT_					0	0	0		ENSG00000188257|ENST00000482011|PLA2G2A	ENSG00000188257|ENST00000482011|PLA2G2A	ENSG00000188257|ENST00000482011|PLA2G2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7444335818291	2	484.743431	967.472308	0.020095	9.741E-06	1.0561	0.00051196	1.0762	0.0005217	484.74429536346224	12.378	0.088075	13.165	13.124	13.212	0.78751					4	2	2	0	0	0	0.28372	1	5145	5145		26.268	4.5215	1	429060			6374	4855	3143	3163	7990	7990					-0.012728776303333689
FSNSGSRIT	9	Unmodified	_FSNSGSRIT_					0	0	0		ENSG00000188257|ENST00000482011|PLA2G2A	ENSG00000188257|ENST00000482011|PLA2G2A	ENSG00000188257|ENST00000482011|PLA2G2A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	484.743431	967.472308	-0.089764	-4.3513E-05	0.89338	0.00043306	0.80362	0.00038955	484.74281820741044	12.621	0.11972	13.315	13.227	13.346	0.69396	0.074621	-0.00011361	NaN	26.268	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166360			6375	4855	3143	3163							-0.012728776303333689
FSNSPPRESV	10	Unmodified	_FSNSPPRESV_					0	0	0		CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2790405154228	2	560.275095	1118.53564	2.7361	0.001533	1.8582	0.0010411	4.5943	0.0025741	560.2759182462823	44.873	0.24945	46.238	46.056	46.305	1.3653					12	7	2	0	0	0	0.8325	1	18813	18813		8.7454	0.15213	1	751790		+	6376	328	3144	3164	7991	7991					-0.01888936913087491
FSPUTCSGFN	10	Unmodified	_FSPUTCSGFN_					0	0	0			REV__nc|ENSG00000211452|P49895-5|DIO1	REV__nc|ENSG00000211452|P49895-5|DIO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1016113162041	3	370.786977	1109.3391	2.1654	0.00080289	0.32289	0.00011972	2.4882	0.00092261	370.78758734980477	62.808	0.093819	64.752	64.688	64.782	1.9444					4	2	2	0	0	0	0.12561	1	26349	26349		0	0	0	168750	+		6377	11830	3145	3165	7992	7992					-0.2111930863343332
FSQDHLVIY	9	Unmodified	_FSQDHLVIY_					0	0	0		nc|ENSG00000170502|Q9BW91-2|NUDT9;ENSG00000170502|ENST00000302174|NUDT9	nc|ENSG00000170502|Q9BW91-2|NUDT9	nc|ENSG00000170502|Q9BW91-2|NUDT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2864868044853	2	561.284931	1120.55531	1.8545	0.0010409	1.7379	0.00097548	3.5925	0.0020164	561.2858858766408	42.477	0.44372	43.817	43.571	44.014	1.3399					45	13	5	0	0	0	0.053939	4	17791	17745;17791;17830;17873		66.457	30.33	1	22271000			6378	4150	3146	3166	7993;7994;7995;7996	7994					-0.00014560902332050318
FSQDHLVIY	9	Unmodified	_FSQDHLVIY_					0	0	0		nc|ENSG00000170502|Q9BW91-2|NUDT9;ENSG00000170502|ENST00000302174|NUDT9	nc|ENSG00000170502|Q9BW91-2|NUDT9	nc|ENSG00000170502|Q9BW91-2|NUDT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2864868044853	2	561.284931	1120.55531	1.715	0.00096262	0.46159	0.00025908	2.1766	0.0012217	561.2851127506337	41.951	0.37795	43.872	43.633	44.011	1.9211					37	11	4	0	0	0	0.040497	3	17535	17535;17582;17621		75.761	35.804	1	23520000			6379	4150	3146	3166	7997;7998;7999	7997					-0.00014560902332050318
FSQHCGRDSR	10	Unmodified	_FSQHCGRDSR_					0	0	0		ENST00000481161.5_1_2:163200677-163213018:+|nuORF;ENST00000487445.6_1_2:163200677-163215720:+|nuORF	ENST00000481161.5_1_2:163200677-163213018:+|nuORF	ENST00000481161.5_1_2:163200677-163213018:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7675659060478	2	596.767446	1191.52034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.028	1	53.004	52.504	53.504	1.9753								0	0	0	0.65737	1	21384	21384		7.609	0	1				6380	6822	3147	3167	8000	8000					-0.06776126981958441
FSQKNYWF	8	Unmodified	_FSQKNYWF_					0	0	0		ENST00000314970.10_1_4:185606637-185606834:+|nuORF	ENST00000314970.10_1_4:185606637-185606834:+|nuORF	ENST00000314970.10_1_4:185606637-185606834:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5133849978447	3	373.846787	1118.51853	0.37196	0.00013905	0.27241	0.00010184	0.64437	0.00024089	374.1816305824867	23.397	0.6106	24.612	24.198	24.808	1.2145					44	19	4	0	0	0	0.88351	1	9752	9752		6.7232	3.4035	1	1740400			6381	5824	3148	3168	8001	8001					-0.03598812728273515
FSQSRIKMH	9	Unmodified	_FSQSRIKMH_					0	0	0			REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	567.7834350466728	2	567.29785	1132.58115	0.21626	0.00012269	-0.70692	-0.00040104	-0.49066	-0.00027835	567.297297720661	51.315	0.86887	53.291	53.057	53.926	1.9753					61	30	3	0	0	0	0.10844	1	21702	21702		16.942	0	1	17352000	+		6382	10732	3149	3169	8002	8002					0.020160100682915072
FSREYYEK	8	Unmodified	_FSREYYEK_					0	0	0		ENSG00000179008|ENST00000321731|C14orf39	ENSG00000179008|ENST00000321731|C14orf39	ENSG00000179008|ENST00000321731|C14orf39	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2692138552666	2	561.266739	1120.51892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.766	1	22.943	22.443	23.443	1.177								0	0	0	1.0178	1	9092	9092		5.2307	0.90143	1				6383	4502	3150	3170	8003	8003					-0.03651437799044288
FSSHILVVV	9	Unmodified	_FSSHILVVV_					0	0	0		ENSG00000157778|ENST00000288607|PSMG3	ENSG00000157778|ENST00000288607|PSMG3	ENSG00000157778|ENST00000288607|PSMG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7960998415947	2	500.794935	999.575317	1.7885	0.00089569	0.76601	0.00038362	2.5546	0.0012793	500.79509137628577	54.306	0.47872	55.71	55.485	55.964	1.4048					31	14	3	0	0	0	0.09539	1	22695	22695		50.855	12.704	1	3449600			6384	3482	3151	3171	8004	8004					0.07551234828281395
FSSHILVVV	9	Unmodified	_FSSHILVVV_					0	0	0		ENSG00000157778|ENST00000288607|PSMG3	ENSG00000157778|ENST00000288607|PSMG3	ENSG00000157778|ENST00000288607|PSMG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7951537966728	2	500.794935	999.575317	1.7342	0.00086847	-4.2374	-0.0021221	-2.5032	-0.0012536	501.2926177025	54.274	0.49672	56.242	55.97	56.467	1.9684					23	15	2	0	0	0	0.49082	1	22628	22628		15.847	0	1	2503200			6385	3482	3151	3171	8005	8005					0.07551234828281395
FSSISWMGG	9	Unmodified	_FSSISWMGG_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B;ENST00000557163.1_1_14:61746812-61748042:-|nuORF	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2167541384697	2	486.218203	970.421853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.872	1	13.598	13.098	14.098	0.72639								0	0	0	0.42693	1	5345	5345		4.756	0.42677	1				6386	4597	3152	3172	8006	8006					-0.06454123279684154
FSSQKGVKGV	10	Unmodified	_FSSQKGVKGV_					0	0	0		nc|ENSG00000158055|Q8TE85-3|GRHL3;ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3;nc|ENSG00000158055|Q8TE85-4|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1400024294853	2	518.792924	1035.57129	2.6107	0.0013544	0.77899	0.00040413	3.3896	0.0017585	518.7937382351577	45.149	0.3237	46.514	46.369	46.692	1.3653					22	9	3	0	0	0	0.12519	1	18873	18873		7.2892	0.93513	1	3568600			6387	3490	3153	3173	8007	8007					0.05493145334571636
FSTFLFLSF	9	Unmodified	_FSTFLFLSF_					0	0	0			REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7913696169853	2	554.789318	1107.56408	2.4076	0.0013357	-2.0814	-0.0011548	0.32615	0.00018095	554.7880467620201	59.491	0.43775	60.91	60.708	61.146	1.4196					29	13	3	0	0	0	0.1735	1	24918	24918		36.044	7.5574	1	4193300	+		6388	12218	3154	3174	8008	8008					0.014604127341272033
FSTFLFLSF	9	Unmodified	_FSTFLFLSF_					0	0	0			REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7910034060478	2	554.789318	1107.56408	2.4227	0.0013441	-1.7652	-0.00097931	0.65752	0.00036479	554.7881022515427	59.041	0.37946	61.01	60.814	61.193	1.969					26	11	3	0	0	0	0.24063	2	24760	24760;24808		28.487	5.3384	1	2705000	+		6389	12218	3154	3174	8009;8010	8009					0.014604127341272033
FSTFLFLSF	9	Unmodified	_FSTFLFLSF_					0	0	0			REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	REV__ENST00000265073.8_1_5:32601627-32601789:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	554.789318	1107.56408	2.4227	0.0013441	-1.7652	-0.00097931	0.65752	0.00036479	554.7881022515427	59.041	0.37946	61.01	60.814	61.193	1.969	0.049866	0.00023128	NaN	36.044	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2705000	+		6390	12218	3154	3174							0.014604127341272033
FSTKIHLSL	9	Unmodified	_FSTKIHLSL_					0	0	0			REV__ENSG00000089558|ENST00000264661|KCNH4	REV__ENSG00000089558|ENST00000264661|KCNH4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3044921755791	2	523.305667	1044.59678	2.0252	0.0010598	-2.9603	-0.0015491	-0.9351	-0.00048934	523.3040720829765	66.45	1.2573	67.838	67.299	68.557	1.3888					66	40	3	0	0	0	0.68551	1	27973	27973		7.9102	2.6795	1	1025000	+		6391	8885	3155	3175	8011	8011					0.0762661985700106
FSVAVSPSLDL	11	Unmodified	_FSVAVSPSLDL_					0	0	0		FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA	FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8079711794853	2	567.805697	1133.59684	3.2788	0.0018617	0.57736	0.00032783	3.8562	0.0021896	567.8062033298194	60.858	0.47803	62.277	61.995	62.473	1.4196					31	14	3	0	0	0	0.84637	1	25512	25512		13.042	2.9685	1	2562600			6392	4968	3156	3176	8012	8012					0.035385750663408544
FSVNNIGLK	9	Unmodified	_FSVNNIGLK_					0	0	0			REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2826721072197	2	496.282192	990.549831	0.69129	0.00034307	0.67874	0.00033684	1.37	0.00067992	496.28247756730275	23.675	0.39776	23.675	23.504	23.902	0					28	12	3	0	0	0	0.16939	2	9853	9853;9903		36.506	0.759	1	2336800	+		6393	10605	3157	3177	8013;8014	8013					0.05417760305851971
FSVNNIGLK	9	Unmodified	_FSVNNIGLK_					0	0	0			REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2831909060478	2	496.282192	990.549831	1.4101	0.00069981	-0.010055	-4.9899E-06	1.4001	0.00069482	496.2821486031964	23.565	0.31112	23.798	23.628	23.939	0.23306					16	9	2	0	0	0	0.33297	1	9809	9809		23.79	4.5328	1	812140	+		6394	10605	3157	3177	8015	8015					0.05417760305851971
FSVNNIGLK	9	Unmodified	_FSVNNIGLK_					0	0	0			REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	496.282192	990.549831	0.69129	0.00034307	0.67874	0.00033684	1.37	0.00067992	496.28247756730275	23.675	0.39776	23.675	23.504	23.902	0	-0.061663	0.00026063	NaN	36.506	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2336800	+		6395	10605	3157	3177							0.05417760305851971
FSVNNIGLK	9	Unmodified	_FSVNNIGLK_					0	0	0			REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	REV__nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	496.282192	990.549831	1.4101	0.00069981	-0.010055	-4.9899E-06	1.4001	0.00069482	496.2821486031964	23.565	0.31112	23.798	23.628	23.939	0.23306	0.061663	-0.00042304	NaN	36.506	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	812140	+		6396	10605	3157	3177							0.05417760305851971
FSVSARKKL	9	Unmodified	_FSVSARKKL_					0	0	0			REV__ENST00000538682.5_1_11:62649445-62650469:+|nuORF	REV__ENST00000538682.5_1_11:62649445-62650469:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1382324099541	2	518.319109	1034.62366	1.9851	0.0010289	-1.3955	-0.00072332	0.58962	0.00030561	518.3194846271798	66.935	0.49635	68.324	68.089	68.586	1.3887					19	15	2	0	0	0	0.11684	1	28167	28167		7.9102	2.1497	1	1169800	+		6397	13765	3158	3178	8016	8016					0.10773728468188892
FSVSARKKL	9	Unmodified	_FSVSARKKL_					0	0	0			REV__ENST00000538682.5_1_11:62649445-62650469:+|nuORF	REV__ENST00000538682.5_1_11:62649445-62650469:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	518.319109	1034.62366	1.6795	0.0008705	-1.0092	-0.00052308	0.67028	0.00034742	518.3189360603069	66.622	0.43694	68.511	68.15	68.587	1.8889	0.12479	-0.00060763	NaN	7.9102	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1601900	+		6398	13765	3158	3178							0.10773728468188892
FSVVYHYL	8	Unmodified	_FSVVYHYL_					0	0	0			REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|356|3|anti-sense	REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|356|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2661010622978	2	514.26601	1026.51747	1.0566	0.00054338	-0.03395	-1.7459E-05	1.0227	0.00052592	514.2658912792583	37.427	0.24255	39.247	39.097	39.34	1.8202					16	8	3	0	0	0	0.87803	1	15710	15710		10.183	0	1	658090	+		6399	14329	3159	3179	8017	8017					0.005269729028441361
FSWLFLEAR	9	Unmodified	_FSWLFLEAR_					0	0	0			REV__ENSG00000148483|ENST00000377495|TMEM236	REV__ENSG00000148483|ENST00000377495|TMEM236	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8120605349541	2	584.811116	1167.60768	2.6262	0.0015358	1.0243	0.00059904	3.6505	0.0021349	584.811011041431	65.575	0.8662	66.973	66.443	67.31	1.3989					68	27	4	0	0	0	0.17276	4	27462	27408;27462;27514;27571		36.127	0	1	6975500	+		6400	10348	3160	3180	8018;8019;8020;8021	8019					0.030580222312664773
FSWPDVREL	9	Unmodified	_FSWPDVREL_					0	0	0		ENSG00000126822|ENST00000247226|PLEKHG3;nc|ENSG00000126822|A1L390-3|PLEKHG3;nc|ENSG00000126822|A1L390-2|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.7915527224541	2	574.790381	1147.56621	2.5915	0.0014896	-0.23653	-0.00013596	2.355	0.0013536	574.7903486237376	65.738	1.2995	67.137	66.071	67.37	1.3989					88	41	3	0	0	0	0.060242	6	27528	27369;27423;27477;27528;27578;27631		63.961	27.454	1	4461100			6401	2319	3161	3181	8022;8023;8024;8025;8026;8027	8025					-0.001671585280519139
FSWPDVREL	9	Unmodified	_FSWPDVREL_					0	0	0		ENSG00000126822|ENST00000247226|PLEKHG3;nc|ENSG00000126822|A1L390-3|PLEKHG3;nc|ENSG00000126822|A1L390-2|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.7913696169853	2	574.790381	1147.56621	1.8511	0.001064	0.12551	7.2141E-05	1.9767	0.0011362	574.7902260238312	65.217	1.3468	67.125	66.119	67.466	1.9085					76	42	3	0	0	0	0.060242	5	27408	27201;27250;27304;27356;27408		63.961	23.32	1	3904300			6402	2319	3161	3181	8028;8029;8030;8031;8032	8032					-0.001671585280519139
FSYAFPKEF	9	Unmodified	_FSYAFPKEF_					0	0	0		ENST00000523639.5_1_6:99998829-100016472:-|nuORF;nc|ENSG00000112237|P24863-2|CCNC;ENSG00000112237|ENST00000520429|CCNC	ENST00000523639.5_1_6:99998829-100016472:-|nuORF	ENST00000523639.5_1_6:99998829-100016472:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	568.2786743044853	2	568.276575	1134.5386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.303	1	58.272	57.772	58.772	1.9684								0	0	0	0.041875	1	23612	23612		47.594	15.477	1				6403	1774	3162	3182	8033	8033					-0.023290617882821607
FTAAQWREPIE	11	Unmodified	_FTAAQWREPIE_					0	0	0		tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	674.3373901247978	2	674.338227	1346.6619	2.2511	0.001518	-1.5185	-0.001024	0.73255	0.00049399	674.3372431057219	59.115	0.28423	59.115	58.942	59.226	0					14	8	2	0	0	0	0.88359	1	24659	24659		10.8	0	1	1429600			6404	16429	3163	3183	8034	8034					0.0024356959218039265
FTADFVRQL	9	Unmodified	_FTADFVRQL_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.7949096560478	2	548.792924	1095.57129	0.81468	0.00044709	0.48853	0.0002681	1.3032	0.00071519	548.7933972098934	52.358	0.31279	53.754	53.554	53.867	1.3966					26	9	4	0	0	0	0.0080158	1	21915	21915		110.67	55.901	1	4280700			6405	3464	3164	3184	8035	8035					0.027331453345595946
FTADFVRQL	9	Unmodified	_FTADFVRQL_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.7941772341728	2	548.792924	1095.57129	0.93132	0.0005111	1.0309	0.00056577	1.9623	0.0010769	548.7935771831851	51.772	0.30761	53.745	53.585	53.892	1.9722					24	9	3	0	0	0	0.024001	2	21667	21667;21714		96.111	54.016	1	4074000			6406	3464	3164	3184	8036;8037	8036					0.027331453345595946
FTAVVSLKH	9	Unmodified	_FTAVVSLKH_					0	0	0			REV__ENST00000514938.1_1_22:50943733-50944613:-|nuORF	REV__ENST00000514938.1_1_22:50943733-50944613:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2638122439384	2	501.292559	1000.57057	2.0639	0.0010346	1.4133	0.00070849	3.4772	0.0017431	501.29335744633033	66.335	0.27291	67.724	67.478	67.751	1.3887					13	8	3	0	0	0	0.11684	1	27795	27795		4.3292	1.7518	1	1595800	+		6407	8978	3165	3185	8038	8038					0.07030350685533904
FTDIGKVDF	9	Unmodified	_FTDIGKVDF_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;NUP160|p.A767Dfs*11|1|0.06|ENSG00000030066|chr11:47808471-47808472|-/T|frameshift_variant	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2673828005791	2	521.266207	1040.51786	2.4627	0.0012837	0.98772	0.00051486	3.4504	0.0017986	521.2660452946025	45.273	0.32526	46.638	46.464	46.79	1.3653					23	9	3	0	0	0	0.12216	1	18968	18968		41.956	12.874	1	1672600			6408	633	3166	3186	8039	8039					-0.0007765216794268781
FTDIGKVDF	9	Unmodified	_FTDIGKVDF_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160;ENST00000526870.1_3_11:47861380-47861614:-|nuORF;NUP160|p.A767Dfs*11|1|0.06|ENSG00000030066|chr11:47808471-47808472|-/T|frameshift_variant	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2667114138603	2	521.266207	1040.51786	1.9352	0.0010088	1.3282	0.00069233	3.2634	0.0017011	521.2665861590665	44.764	0.35056	46.723	46.513	46.863	1.9596					22	10	3	0	0	0	0.12216	2	18777	18731;18777		41.956	12.874	1	1100200			6409	633	3166	3186	8040;8041	8041					-0.0007765216794268781
FTDIPFNYHK	10	Unmodified	_FTDIPFNYHK_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.8798095583916	3	427.880267	1280.61897	-0.1091	-4.668E-05	-1.0518	-0.00045005	-1.1609	-0.00049673	427.87959247587474	15.706	0.87045	15.706	15.186	16.056	0					60	27	3	0	0	0	0.82019	1	6564	6564		5.7834	1.3773	1	2982100	+		6410	15091	3167	3187	8042	8042					-0.010112004652455653
FTDMFIYWIHR	11	Unmodified	_FTDMFIYWIHR_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant;ENST00000531140.1_1_11:121174081-121177378:+|nuORF	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2537719607353	3	510.251707	1527.73329	0.2629	0.00013414	1.0104	0.00051556	1.2733	0.0006497	510.58659891788375	13.39	0.15507	14.117	14.008	14.163	0.72639					9	4	3	0	0	0	1.0369	1	5557	5557		1.1098	0.096179	1	397600			6411	1686	3168	3188	8043	8043					-0.009466339748314567
FTEASIVYI	9	Unmodified	_FTEASIVYI_					0	0	0			REV__ENSG00000116459|ENST00000369722|ATP5PB	REV__ENSG00000116459|ENST00000369722|ATP5PB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7763549685478	2	521.776408	1041.53826	2.3597	0.0012313	0.18323	9.5604E-05	2.543	0.0013269	521.7754606408131	63.869	0.38681	65.276	65.079	65.466	1.4071					13	11	2	0	0	0	0.39927	1	26789	26789		20.454	1.0146	1	1540700	+		6412	9473	3169	3189	8044	8044					0.019155184918645318
FTELELKLGR	10	Unmodified	_FTELELKLGR_					0	0	0			REV__ENSG00000198574|ENST00000367929|SH2D1B	REV__ENSG00000198574|ENST00000367929|SH2D1B	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.3508178591728	2	603.348063	1204.68157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.66	1	97.887	97.387	98.387	0.22776								0	0	0	0.66166	1	41099	41099		1.6526	0	1		+		6413	11716	3170	3190	8045	8045					0.08741945602923806
FTFEVSKTKN	10	Unmodified	_FTFEVSKTKN_					0	0	0			REV__nc|ENSG00000196776|Q08722-2|CD47	REV__nc|ENSG00000196776|Q08722-2|CD47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8203002810478	2	600.816596	1199.61864	3.9034	0.0023452	3.2864	0.0019745	7.1898	0.0043198	600.8179300162474	81.922	0.43989	83.592	83.295	83.734	1.67					19	13	2	0	0	0	0.78468	1	34341	34341		13.906	2.2658	1	1006600	+		6414	11647	3171	3191	8046	8046					0.02681379814907814
FTFKKFFL	8	Unmodified	_FTFKKFFL_					0	0	0		ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3118163943291	2	539.310221	1076.60589	1.4063	0.00075845	-3.3037	-0.0017817	-1.8973	-0.0010233	539.3088498987989	46.077	0.24451	48.047	47.943	48.188	1.9703					11	7	2	0	0	0	0.87431	1	19288	19288		12.532	0.29089	1	498970			6415	6718	3172	3192	8047	8047					0.07065013213309612
FTFLYWHL	8	Unmodified	_FTFLYWHL_					0	0	0		MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant;ENSG00000151690|ENST00000392328|MFSD6	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7899047732353	2	563.789653	1125.56475	3.5414	0.0019966	-2.7425	-0.0015462	0.79883	0.00045037	563.7875760442746	81.565	0.40242	82.798	82.564	82.966	1.2332					29	12	3	0	0	0	0.87655	1	34291	34291		11.114	0	1	2536400			6416	3296	3173	3193	8048	8048					0.006992521738311552
FTFLYWHL	8	Unmodified	_FTFLYWHL_					0	0	0		MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant;ENSG00000151690|ENST00000392328|MFSD6	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7902709841728	2	563.789653	1125.56475	2.9921	0.0016869	-0.69331	-0.00039088	2.2988	0.001296	563.7882098307126	81.127	0.2802	82.823	82.703	82.983	1.6959					18	8	3	0	0	0	0.87655	1	34023	34023		11.114	1.767	1	2476400			6417	3296	3173	3193	8049	8049					0.006992521738311552
FTGPTIIL	8	Unmodified	_FTGPTIIL_					0	0	0			REV__nc|ENSG00000108576|P31645-2|SLC6A4	REV__nc|ENSG00000108576|P31645-2|SLC6A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	861.5101196169853	1	861.508032	860.500755	1.7567	0.0015134	0.94594	0.00081493	2.7027	0.0023284	861.5089317481638	73.852	0.27684	73.852	73.642	73.919	0					15	8	2	0	0	0	0.51105	1	30733	30733		46.921	0	1	523690	+		6418	9258	3174	3194	8050	8050					0.06492472016918782
FTIGGSTIVKK	11	Unmodified	_FTIGGSTIVKK_					0	0	0			REV__FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	REV__FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8451415896416	2	575.845156	1149.67576	2.7687	0.0015943	-3.1076	-0.0017895	-0.33886	-0.00019513	575.8432705671981	75.07	0.68332	76.851	76.513	77.196	1.7817					53	21	3	0	0	0	1.0131	1	31526	31526		2.9952	0.69251	1	2018100	+		6419	9358	3175	3195	8051	8051					0.10690847091291289
FTIVLEGSLI	10	Unmodified	_FTIVLEGSLI_					0	0	0		ENSG00000170456|ENST00000389082|DENND5B;DNAJB9-DENND5B|1|fusion;nc|ENSG00000170456|Q6ZUT9-2|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	ENSG00000170456|ENST00000389082|DENND5B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.2758666872978	2	546.320983	1090.62741	2.3159	0.0012652	1.2453	0.00068035	3.5613	0.0019456	546.3220315392371	59.6	0.21798	61.02	60.958	61.176	1.4196					8	6	2	0	0	0	0.12302	1	25000	25000		25.399	0	1	431960			6420	419	3176	3196	8052	8052					0.08572353451381787
FTKRLRSSR	9	Unmodified	_FTKRLRSSR_					0	0	0		ENST00000566445.5_1_16:75642811-75646269:-|nuORF	ENST00000566445.5_1_16:75642811-75646269:-|nuORF	ENST00000566445.5_1_16:75642811-75646269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8452026247978	2	575.843813	1149.67307	1.705	0.00098179	-0.86595	-0.00049865	0.83901	0.00048314	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.83753	1	32047	32047		1.8442	0	1	3135100			6421	7362	3177	3197	8053	8053					0.10422436476983421
FTLEKNFVI	9	Unmodified	_FTLEKNFVI_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8149291872978	2	555.813325	1109.6121	1.71	0.00095044	0.06377	3.5444E-05	1.7738	0.00098589	555.8130678738174	61.864	0.21928	61.864	61.741	61.96	0					11	6	2	0	0	0	0.63129	1	25797	25797		10.074	2.7847	1	559210			6422	2985	3178	3198	8054	8054					0.061674866541807205
FTLEKNFVI	9	Unmodified	_FTLEKNFVI_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.8129760622978	2	555.813325	1109.6121	2.019	0.0011222	-0.40456	-0.00022486	1.6145	0.00089735	555.8128910126574	61.233	0.21819	61.563	61.453	61.671	0.32974					10	6	2	0	0	0	0.44512	1	25641	25641		18.146	2.2992	1	608270			6423	2985	3178	3198	8055	8055					0.061674866541807205
FTLEKNFVI	9	Unmodified	_FTLEKNFVI_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.2693969607353	2	555.813325	1109.6121	2.463	0.001369	-0.83773	-0.00046562	1.6253	0.00090337	555.8144449916944	60.029	0.29937	61.448	61.267	61.566	1.4196					23	9	3	0	0	0	0.029768	1	25186	25186		60.074	29.437	1	2293900			6424	2985	3178	3198	8056	8056					0.061674866541807205
FTLEKNFVI	9	Unmodified	_FTLEKNFVI_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	555.813325	1109.6121	2.7166	0.0015099	-0.22207	-0.00012343	2.4946	0.0013865	555.8143420108426	59.521	0.326	61.49	61.286	61.612	1.969	-0.10141	5.7528E-05	NaN	75.761	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2497600			6425	2985	3178	3198							0.061674866541807205
FTLKNTAINWI	11	Unmodified	_FTLKNTAINWI_					0	0	0			REV__ATP6V0A1|p.P621Tfs*34|1|0.05|ENSG00000033627|chr17:42500887-42500888|-/A|frameshift_variant	REV__ATP6V0A1|p.P621Tfs*34|1|0.05|ENSG00000033627|chr17:42500887-42500888|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	440.9142944216728	3	440.915201	1319.72377	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.667	1	20.726	20.226	21.226	1.0585								0	0	0	0.63775	1	8191	8191		5.5233	0.63098	1		+		6426	8150	3179	3199	8057	8057					0.07669921011301994
FTLLEVRTL	9	Unmodified	_FTLLEVRTL_					0	0	0			REV__ENSG00000198286|ENST00000396946|CARD11	REV__ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3268310427666	2	546.326599	1090.63865	1.4614	0.0007984	-2.1179	-0.0011571	-0.65648	-0.00035865	546.3250484530066	72.958	0.74606	72.958	72.745	73.491	0					44	23	3	0	0	0	0.22154	1	30415	30415		30.637	0.79596	1	4389900	+		6427	11707	3180	3200	8058	8058					0.09695175545516577
FTLTEFPPF	9	Unmodified	_FTLTEFPPF_					0	0	0			REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|120|1|anti-sense	REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|120|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2170287966728	2	549.778951	1097.54335	1.6352	0.00089902	-3.3946	-0.0018663	-1.7593	-0.00096725	549.7766660229338	42.075	0.27564	43.996	43.827	44.103	1.9211					12	8	2	0	0	0	0.116	1	17663	17663		9.3474	1.4373	1	1508100	+		6428	14166	3181	3201	8059	8059					-0.0015217764550925494
FTLTEFPPF	9	Unmodified	_FTLTEFPPF_					0	0	0			REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|120|1|anti-sense	REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|120|1|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	549.778951	1097.54335	1.5189	0.00083506	-2.5074	-0.0013785	-0.98852	-0.00054347	549.7773446195896	42.587	0.28162	43.926	43.764	44.046	1.3399	-0.03471	0.00039116	NaN	9.3474	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1176700	+		6429	14166	3181	3201							-0.0015217764550925494
FTMDVQFKRM	10	Unmodified	_FTMDVQFKRM_					0	0	0			REV__ENSG00000229292|ENST00000341750|RFPL4AL1	REV__ENSG00000229292|ENST00000341750|RFPL4AL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8822204470634	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.10403	1	0.26247	-0.23753	0.76247	0.15844								0	0	0	0.66254	1	42	42		0.15932	0	1		+		6430	11886	3182	3202	8060	8060					-0.012699271806923207
FTNEDVFMYS	10	Unmodified	_FTNEDVFMYS_					0	0	0			REV__ENST00000522309.1_1_X:134185341-134186138:-|nuORF	REV__ENST00000522309.1_1_X:134185341-134186138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.7639648318291	2	626.763171	1251.51179	1.3565	0.00085021	-0.089315	-5.5979E-05	1.2672	0.00079423	626.7632818374611	64.764	0.53487	66.692	66.422	66.957	1.928					66	16	6	0	0	0	0.11344	2	27221	27181;27221		61.602	9.3336	1	27545000	+		6431	9911	3183	3203	8061;8062	8062					-0.1039053846175193
FTPGLITL	8	Unmodified	_FTPGLITL_					0	0	0		ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	861.5093261599541	1	861.508032	860.500755	2.271	0.0019565	-1.8009	-0.0015515	0.47016	0.00040505	861.5059114485924	73.307	0.25993	73.632	73.494	73.754	0.32494					12	8	2	0	0	0	0.31225	1	30687	30687		70.716	7.1527	1	594320			6432	1770	3184	3204	8063	8063					0.06492472016896045
FTPGLITL	8	Unmodified	_FTPGLITL_					0	0	0		ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	861.508032	860.500755	1.7567	0.0015134	0.94594	0.00081493	2.7027	0.0023284	861.5089317481638	73.852	0.27684	73.852	73.642	73.919	0	0.21116	0.00077388	NaN	70.716	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	523690			6433	1770	3184	3204							0.06492472016896045
FTPGLITL	8	Unmodified	_FTPGLITL_					0	0	0		ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	ENSG00000112195|ENST00000483722|TREML2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	861.508032	860.500755	1.9956	0.0017192	-0.32015	-0.00027581	1.6754	0.0014434	861.507820588948	72.096	0.25058	73.438	73.279	73.53	1.3415	-0.20267	-0.00031686	NaN	70.716	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	599900			6434	1770	3184	3204							0.06492472016896045
FTPLEDMIFLK	11	Unmodified	_FTPLEDMIFLK_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9087097048759	3	451.908947	1352.70501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.757	1	14.584	14.084	15.084	0.82789								0	0	0	0.63775	1	5704	5704		1.3296	0	1				6435	745	3185	3205	8064	8064					0.04276623325245055
FTQGHIVEV	9	Unmodified	_FTQGHIVEV_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;ENST00000479783.1_1_2:237233333-237240271:-|nuORF	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2721435427666	2	515.271824	1028.5291	1.2168	0.00062698	-0.57176	-0.00029461	0.64503	0.00033236	515.2716240564163	28.69	0.33705	29.972	29.794	30.131	1.2825					28	10	4	0	0	0	0.010585	2	12009	12009;12058		106.94	63.082	1	7316400			6436	2525	3186	3206	8065;8066	8065					0.015971699261854155
FTQGHIVEV	9	Unmodified	_FTQGHIVEV_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;ENST00000479783.1_1_2:237233333-237240271:-|nuORF	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2725097537041	2	515.271824	1028.5291	1.0011	0.00051584	-0.26431	-0.00013619	0.73681	0.00037966	515.2717579320229	28.148	0.36319	29.924	29.759	30.122	1.7754					26	11	3	0	0	0	0.0022704	2	11799	11752;11799		129.77	69.383	1	9826800			6437	2525	3186	3206	8067;8068	8068					0.015971699261854155
FTQKKRELL	9	Unmodified	_FTQKKRELL_					0	0	0		tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	581.3015014529228	2	581.850773	1161.68699	2.6645	0.0015503	3.4814	0.0020256	6.1458	0.003576	581.8538764445484	73.461	0.15346	75.257	75.193	75.347	1.7962					6	4	2	0	0	0	0.11518	1	30809	30809		11.64	7.3111	1	340460			6438	16898	3187	3207	8069	8069					0.11261669185432766
FTRISNFDKY	10	Unmodified	_FTRISNFDKY_					0	0	0			REV__tr|A0A7D6VRD3|A0A7D6VRD3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06370PE=4SV=1	REV__tr|A0A7D6VRD3|A0A7D6VRD3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06370PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8898803591728	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.444	1	95.633	95.133	96.133	1.1887								0	0	0	0.66151	1	39733	39733		1.9064	0	1		+		6439	15407	3188	3208	8070	8070					0.0072018456346540916
FTRVFHFF	8	Unmodified	_FTRVFHFF_					0	0	0			REV__ENST00000440048.1_1_6:31762999-31763047:-|nuORF	REV__ENST00000440048.1_1_6:31762999-31763047:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2182494997978	2	550.787444	1099.56034	1.6423	0.00090456	3.7705	0.0020768	5.4128	0.0029813	550.7878952332924	41.992	0.21576	43.913	43.795	44.011	1.9211					11	6	2	0	0	0	2.3239	1	17574	17574		2.8892	0.31174	1	586710	+		6440	12716	3189	3209	8071	8071					0.014537877509383179
FTSARSSPK	9	Unmodified	_FTSARSSPK_					0	0	0		nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	328.1596557497978	3	327.510174	979.508694	-0.54547	-0.00017865	-2.6758	-0.00087637	-3.2213	-0.001055	327.50927256269057	10.065	0.15873	10.809	10.697	10.856	0.74462					6	4	2	0	0	0	0.11568	1	4169	4169		7.1017	0.37856	1	347920			6441	5013	3190	3210	8072	8072					0.01811999266374187
FTSFISLYN	9	Unmodified	_FTSFISLYN_					0	0	0		ENSG00000136240|ENST00000258739|KDELR2;ENST00000462052.1_1_7:6513727-6523688:-|nuORF;nc|ENSG00000136240|P33947-2|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1091.547778308392	1	1091.54079	1090.53351	2.6919	0.0029384	-0.22188	-0.00024219	2.4701	0.0026962	1091.5408294928136	59.073	0.44211	61.042	60.814	61.256	1.969					33	13	3	0	0	0	0.19075	1	24735	24735		34.102	1.797	1	5605400			6442	2716	3191	3211	8073	8073					-0.008133656509016873
FTSILAIGV	9	Unmodified	_FTSILAIGV_					0	0	0			REV__tr|A0A553SKU3|A0A553SKU3_NIACIStageIIIsporulationproteinADOS=NialliacirculansOX=1397GN=spoIIIADPE=4SV=1	REV__tr|A0A553SKU3|A0A553SKU3_NIACIStageIIIsporulationproteinADOS=NialliacirculansOX=1397GN=spoIIIADPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	920.5472289919853	1	920.545145	919.537869	1.6767	0.0015435	-1.6968	-0.001562	-0.020036	-1.8444E-05	920.5433551493007	73.476	0.36244	73.476	73.248	73.611	0					19	11	2	0	0	0	0.11478	1	30613	30613		44.407	1.439	1	2892100	+		6443	14966	3192	3212	8074	8074					0.07488143562670757
FTSKGVGG	8	Unmodified	_FTSKGVGG_					0	0	0			REV__ENST00000574137.1_1_16:10837720-10851732:+|nuORF	REV__ENST00000574137.1_1_16:10837720-10851732:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.2676574587822	2	376.700503	751.386454	-0.30605	-0.00011529	1.6554	0.00062357	1.3493	0.00050828	376.7017345958997	18.018	0.26675	18.997	18.819	19.086	0.97922					10	8	2	0	0	0	2.3239	1	7516	7516		0.79363	0	1	263890	+		6444	9104	3193	3213	8075	8075					0.0008158225482475245
FTSPWKSK	8	Unmodified	_FTSPWKSK_					0	0	0			REV__ENST00000480380.1_1_1:19547455-19547737:-|nuORF	REV__ENST00000480380.1_1_1:19547455-19547737:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1606017947197	3	327.511515	979.512717	-1.6349	-0.00053545	-2.9325	-0.00096042	-4.5674	-0.0014959	327.51066139868493	10.133	0.093148	10.784	10.706	10.799	0.65058					4	2	2	0	0	0	2.3239	1	4197	4197		2.9952	0	1	287250	+		6445	13346	3194	3214	8076	8076					0.022140887600926362
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	689.8608886599541	2	689.857406	1377.70026	1.8921	0.0013052	2.0268	0.0013982	3.9189	0.0027035	689.8592647375084	39.963	0.18909	39.963	39.82	40.009	0					10	5	2	0	0	0	0.88359	1	16730	16730		10.8	2.644	1	1090300	+		6446	15881	3195	3215	8077	8077					0.026517391824881997
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	689.8619262576103	2	689.857406	1377.70026	1.5721	0.0010846	2.9342	0.0020242	4.5063	0.0031087	689.8594694976044	39.439	0.25185	39.751	39.609	39.861	0.31263					14	7	2	0	0	0	0.92747	1	16579	16579		8.1555	1.4324	1	1045300	+		6447	15881	3195	3215	8078	8078					0.026517391824881997
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	690.3618041872978	2	689.857406	1377.70026	0.87296	0.00060222	1.8151	0.0012522	2.6881	0.0018544	689.8591429169218	38.008	0.26647	39.292	39.196	39.462	1.284					19	9	3	0	0	0	0.88359	1	15943	15943		10.8	1.2555	1	5872100	+		6448	15881	3195	3215	8079	8079					0.026517391824881997
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	689.8597900271416	2	689.857406	1377.70026	0.13719	9.464E-05	3.4723	0.0023954	3.6095	0.00249	690.3611224729021	37.461	0.28349	39.281	39.145	39.429	1.8202					22	9	3	0	0	0	0.88359	1	15696	15696		10.8	1.4164	1	2281500	+		6449	15881	3195	3215	8080	8080					0.026517391824881997
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	689.857406	1377.70026	1.8921	0.0013052	2.0268	0.0013982	3.9189	0.0027035	689.8592647375084	39.963	0.18909	39.963	39.82	40.009	0	0.10595	-0.0006218	NaN	10.8	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1090300	+		6450	15881	3195	3215							0.026517391824881997
FTTEMFFSKKL	11	Unmodified	_FTTEMFFSKKL_					0	0	0			REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	REV__tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	689.857406	1377.70026	1.5721	0.0010846	2.9342	0.0020242	4.5063	0.0031087	689.8594694976044	39.439	0.25185	39.751	39.609	39.861	0.31263	-0.10595	0.00063014	NaN	10.8	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1045300	+		6451	15881	3195	3215							0.026517391824881997
FTTRVRRKS	9	Unmodified	_FTTRVRRKS_					0	0	0			REV__ISX|p.I143Sfs*12|1|0.07|ENSG00000175329|chr22:35084428-35084429|-/G|frameshift_variant	REV__ISX|p.I143Sfs*12|1|0.07|ENSG00000175329|chr22:35084428-35084429|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8446533083916	2	575.843813	1149.67307	2.1198	0.0012207	-0.53427	-0.00030766	1.5856	0.00091304	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.83213	1	32014	32014		2.0598	0	1	3953600	+		6452	11152	3196	3216	8081	8081					0.10422436476983421
FTVPHTHVF	9	Unmodified	_FTVPHTHVF_					0	0	0		nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.1903259158134	3	362.190665	1083.55016	-0.84252	-0.00030515	-0.37187	-0.00013469	-1.2144	-0.00043984	362.1904370231454	35.345	0.34414	36.619	36.43	36.774	1.2746					65	32	3	0	0	0	0.087207	2	14831	14831;14871		47.749	31.6	1	7280800			6453	2617	3197	3217	8082;8083	8082					0.01173180025716647
FTVPHTHVF	9	Unmodified	_FTVPHTHVF_					0	0	0		nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.1901122927666	3	362.190665	1083.55016	0.41879	0.00015168	-1.7014	-0.00061625	-1.2827	-0.00046457	362.1900095592007	34.916	0.30981	36.733	36.595	36.905	1.8176					43	26	3	0	0	0	0.03795	1	14642	14642		60.074	38.537	1	6524200			6454	2617	3197	3217	8084	8084					0.01173180025716647
FTVRVFRKNV	10	Unmodified	_FTVRVFRKNV_					0	0	0			REV__ENSG00000141385|ENST00000269143|AFG3L2	REV__ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5868408083916	3	422.587418	1264.74043	2.957	0.0012496	1.5015	0.00063451	4.4585	0.0018841	422.5879004255103	92.409	0.90948	92.577	92.281	93.19	0.16835					45	28	2	0	0	0	0.89803	1	38746	38746		1.5923	0.13716	1	975260	+		6455	10143	3198	3218	8085	8085					0.11864466687939057
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.7748901247978	2	564.771657	1127.52876	1.4428	0.00081484	1.3867	0.00078316	2.8295	0.001598	564.7721128282809	76.893	0.31306	76.893	76.75	77.063	0					17	9	2	0	0	0	0.1735	1	32009	32009		36.044	23.513	1	929300			6456	1384	3199	3219	8086	8086					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1128.545336902142	1	1128.53604	1127.52876	1.9434	0.0021932	3.2942	0.0037176	5.2376	0.0059108	1128.5398917854895	76.893	0.21997	76.893	76.782	77.002	0					9	6	2	0	0	0	0.70108	1	32019	32019		7.2892	2.3922	1	630200			6457	1384	3199	3219	8087	8087					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.7728759646416	2	564.771657	1127.52876	2.1035	0.001188	1.8873	0.0010659	3.9908	0.0022539	564.7719759449477	76.529	0.28736	76.851	76.662	76.949	0.32163					17	8	3	0	0	0	0.34572	1	32001	32001		23.148	14.555	1	706090			6458	1384	3199	3219	8088	8088					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7736694216728	2	564.771657	1127.52876	2.5958	0.001466	0.075075	4.24E-05	2.6709	0.0015084	564.7717696963601	75.445	0.3714	76.752	76.615	76.987	1.3063					31	11	3	0	0	0	0.03795	1	31673	31673		77.984	54.836	1	3593600			6459	1384	3199	3219	8089	8089					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1128.539843738079	1	1128.53604	1127.52876	2.1618	0.0024396	0.0068072	7.6821E-06	2.1686	0.0024473	1128.5352444961213	75.508	0.27918	76.815	76.677	76.956	1.3063					14	8	2	0	0	0	0.033794	2	31678	31678;31727		81.613	41.663	1	2486000			6460	1384	3199	3219	8090;8091	8090					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7726318240166	2	564.771657	1127.52876	2.7708	0.0015648	-0.46859	-0.00026464	2.3022	0.0013002	564.7710676657498	75.103	0.43413	76.884	76.575	77.009	1.7817					30	13	3	0	0	0	0.09539	2	31454	31454;31507		50.855	4.8341	1	2978300			6461	1384	3199	3219	8092;8093	8092					-0.02990249793674593
FTWEGLYNV	9	Unmodified	_FTWEGLYNV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1128.535571277142	1	1128.53604	1127.52876	2.6474	0.0029877	-1.0901	-0.0012302	1.5573	0.0017575	1128.5352587402253	75	0.33932	76.782	76.638	76.978	1.7817					21	10	3	0	0	0	0.033794	1	31456	31456		81.613	33.267	1	1898600			6462	1384	3199	3219	8094	8094					-0.02990249793674593
FTWLSLAK	8	Unmodified	_FTWLSLAK_					0	0	0			REV__ENST00000270139.7_1_21:34730136-34730586:+|nuORF	REV__ENST00000270139.7_1_21:34730136-34730586:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2741577029228	2	483.276378	964.538203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.291	1	14.017	13.517	14.517	0.72639								0	0	0	1.0178	1	5518	5518		16.942	3.0362	1		+		6463	12230	3200	3220	8095	8095					0.054515632825200555
FTYKGLRIF	9	Unmodified	_FTYKGLRIF_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST;chr7:130487006-130495368|411|17.34|0.83|4.39|+|ENST00000399874|MEST,MEST;chr7:130494551-130495368|401|12.07|0.73|4.06|+|ENST00000458161|MEST,MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	382.5844604372978	3	382.221965	1143.64407	0.13771	5.2636E-05	2.2814	0.00087198	2.4191	0.00092462	382.22190201248355	52.687	0.47405	54.084	53.836	54.31	1.3966					21	14	2	0	0	0	0.11467	1	22040	22040		14.405	3.6059	1	1100800			6464	1570	3201	3221	8096	8096					0.07798899127988079
FVAFRDNL	8	Unmodified	_FVAFRDNL_					0	0	0			REV__ENSG00000148798|ENST00000369849|INA	REV__ENSG00000148798|ENST00000369849|INA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	491.7920410037041	2	491.261259	980.507966	2.3711	0.0011648	-2.9193	-0.0014341	-0.54821	-0.00026931	491.2602313075571	78.811	0.42439	79.12	78.895	79.319	0.30932					30	13	3	0	0	0	2.3239	1	32998	32998		10.183	0	1	3514000	+		6465	10355	3202	3222	8097	8097					0.01693204617322408
FVAPFPEVFGK	11	Unmodified	_FVAPFPEVFGK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.3358032107353	2	619.334424	1236.6543	1.8996	0.0011765	0.56072	0.00034728	2.4603	0.0015238	619.3345772428052	70.24	0.24588	70.24	70.118	70.364	0					16	7	3	0	0	0	0.43089	1	29265	29265		26.021	12.978	1	835120		+	6466	335	3203	3223	8098	8098					0.04543462062542858
FVAPFPEVFGK	11	Unmodified	_FVAPFPEVFGK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	619.334424	1236.6543	1.2198	0.00075546	2.0421	0.0012647	3.2619	0.0020202	619.3354987098518	69.682	0.28179	70.004	69.847	70.129	0.32223	-0.11788	0.0014726	NaN	26.021	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	582440		+	6467	335	3203	3223							0.04543462062542858
FVCLFINGPK	10	Unmodified	_FVCLFINGPK_					0	0	0			REV__ENST00000556745.1_1_14:76107286-76108289:+|nuORF	REV__ENST00000556745.1_1_14:76107286-76108289:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.3086425662041	2	569.309895	1136.60524	1.7525	0.00099774	-2.2704	-0.0012926	-0.51789	-0.00029484	569.3080506806938	66.196	0.34286	68.084	67.871	68.214	1.8889					17	10	2	0	0	0	0.846	1	27775	27775		7.2892	0	1	784460	+		6468	9550	3204	3224	8099	8099					0.042398505019491495
FVCSECGRSF	10	Unmodified	_FVCSECGRSF_					0	0	0		nc|ENSG00000099326|P28698-2|MZF1;ENST00000600004.1_1_19:59073441-59074896:-|nuORF;ENSG00000099326|ENST00000215057|MZF1	nc|ENSG00000099326|P28698-2|MZF1	nc|ENSG00000099326|P28698-2|MZF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7389404177666	2	567.738976	1133.4634	1.9862	0.0011277	-2.3941	-0.0013592	-0.40791	-0.00023159	567.7382378143069	66.466	0.36932	67.855	67.657	68.027	1.3887					31	11	4	0	0	0	0.87343	1	27917	27917		4.3292	1.44	1	2722300			6469	1205	3205	3225	8100	8100					-0.09799310582661747
FVDDYTVRV	9	Unmodified	_FVDDYTVRV_					0	0	0		ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.2835571169853	2	557.282389	1112.55022	1.2054	0.00067175	1.6304	0.0009086	2.8358	0.0015803	557.2832742612524	41.278	0.35444	41.278	41.081	41.435	0					26	10	3	0	0	0	0.099302	3	17294	17249;17294;17340		49.554	15.452	1	2391800			6470	1905	3206	3226	8101;8102;8103	8102					-0.0015486476497699186
FVDDYTVRV	9	Unmodified	_FVDDYTVRV_					0	0	0		ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.2843505740166	2	557.282389	1112.55022	1.6494	0.0009192	1.5596	0.00086916	3.2091	0.0017884	557.2831468187867	40.836	0.33175	41.152	40.98	41.312	0.31683					26	10	3	0	0	0	0.081597	2	17182	17131;17182		55.503	31.482	1	2906000			6471	1905	3206	3226	8104;8105	8105					-0.0015486476497699186
FVDDYTVRV	9	Unmodified	_FVDDYTVRV_					0	0	0		ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2838012576103	2	557.282389	1112.55022	2.3142	0.0012896	-0.014586	-8.1285E-06	2.2996	0.0012815	557.2822013954082	39.358	0.35737	40.655	40.475	40.832	1.2961					26	11	3	0	0	0	0.026734	2	16524	16480;16524		92.653	50.814	1	6699800			6472	1905	3206	3226	8106;8107	8107					-0.0015486476497699186
FVDDYTVRV	9	Unmodified	_FVDDYTVRV_					0	0	0		ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	ENSG00000115233|ENST00000409682|PSMD14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2831909060478	2	557.282389	1112.55022	1.2874	0.00071743	0.65871	0.00036709	1.9461	0.0010845	557.2825951407394	38.873	0.32229	40.709	40.558	40.88	1.8366					24	9	3	0	0	0	0.053939	3	16315	16270;16315;16360		66.457	32.055	1	5296900			6473	1905	3206	3226	8108;8109;8110	8109					-0.0015486476497699186
FVDLEPTVI	9	Unmodified	_FVDLEPTVI_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;nc|ENSG00000178462|A6NHL2-2|TUBAL3;ENSG00000178462|ENST00000380419|TUBAL3;ENST00000475683.1_1_2:220116706-220118580:-|nuORF	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1032.567919909954	1	1032.56119	1031.55391	1.6071	0.0016595	2.2436	0.0023166	3.8507	0.0039761	1032.5633523375518	69.526	0.30424	70.892	70.729	71.033	1.3657					15	9	2	0	0	0	0.059546	1	29167	29167		64.236	2.8788	1	2880800			6474	2190	3207	3227	8111	8111					0.039398050088948366
FVDLEPTVI	9	Unmodified	_FVDLEPTVI_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;nc|ENSG00000178462|A6NHL2-2|TUBAL3;ENSG00000178462|ENST00000380419|TUBAL3;ENST00000475683.1_1_2:220116706-220118580:-|nuORF	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7854492068291	2	516.784233	1031.55391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.072	1	70.925	70.425	71.425	1.853								0	0	0	0.092123	1	28983	28983		36.044	7.5574	1				6475	2190	3207	3227	8112	8112					0.039398050088948366
FVDLEPTVI	9	Unmodified	_FVDLEPTVI_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000462806.5_1_2:220116196-220118580:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;nc|ENSG00000178462|A6NHL2-2|TUBAL3;ENSG00000178462|ENST00000380419|TUBAL3;ENST00000475683.1_1_2:220116706-220118580:-|nuORF	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1032.56119	1031.55391	1.8851	0.0019465	0.8585	0.00088645	2.7436	0.0028329	1032.5622867032905	69.017	0.30412	70.87	70.737	71.041	1.853	-0.010759	-0.00091588	NaN	64.236	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2005700			6476	2190	3207	3227							0.039398050088948366
FVDPNGKISL	10	Unmodified	_FVDPNGKISL_					0	0	0		nc|ENSG00000107862|Q92538-3|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;GBF1|p.L1808Tfs*50|1|0.12|ENSG00000107862|chr10:102382171-102382172|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;ENSG00000107862|ENST00000369983|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3021118044853	2	545.300581	1088.58661	2.197	0.001198	0.18569	0.00010125	2.3827	0.0012993	545.3008337343855	41.059	0.40882	42.385	42.147	42.556	1.3255					36	12	4	0	0	0	0.10428	2	17237	17187;17237		63.227	19.786	1	4187200			6477	1609	3208	3228	8113;8114	8114					0.045860121317673475
FVDPNGKISL	10	Unmodified	_FVDPNGKISL_					0	0	0		nc|ENSG00000107862|Q92538-3|GBF1;nc|ENSG00000107862|Q92538-2|GBF1;GBF1|p.L1808Tfs*50|1|0.12|ENSG00000107862|chr10:102382171-102382172|-/C|frameshift_variant;nc|ENSG00000107862|Q92538-1|GBF1;ENSG00000107862|ENST00000369983|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3014404177666	2	545.300581	1088.58661	2.1065	0.0011487	0.97156	0.00052979	3.0781	0.0016785	545.302125906014	40.681	0.5062	42.554	42.338	42.844	1.8731					35	15	4	0	0	0	0.11632	2	17085	17034;17085		61.09	23.116	1	4139800			6478	1609	3208	3228	8115;8116	8116					0.045860121317673475
FVDQSIFHYDV	11	Unmodified	_FVDQSIFHYDV_					0	0	0			REV__ENSG00000155530|ENST00000285928|LRGUK	REV__ENSG00000155530|ENST00000285928|LRGUK	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.3256103396416	2	685.324785	1368.63502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.55	1	18.448	17.948	18.948	0.89794								0	0	0	0.63775	1	7304	7304		2.9952	1.151	1		+		6479	10494	3209	3229	8117	8117					-0.0345553901902349
FVEEYFDQ	8	Unmodified	_FVEEYFDQ_					0	0	0		ENST00000523003.5_1_5:70351153-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENSG00000183474|ENST00000380729|GTF2H2C;ENSG00000145736|ENST00000274400|GTF2H2;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000521858.5_1_5:70355111-70356688:-|nuORF;ENST00000507549.7_1_5:69717595-69723542:+|nuORF	ENST00000523003.5_1_5:70351153-70358599:-|nuORF	ENST00000523003.5_1_5:70351153-70358599:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.1584960818291	3	359.490557	1075.44984	-0.9426	-0.00033886	3.007	0.001081	2.0644	0.00074215	359.8249276251342	79.401	0.36963	79.401	79.206	79.576	0					30	11	3	0	0	0	2.3239	1	33033	33033		0.45834	0	1	1453000			6480	3122	3210	3230	8118	8118					-0.0848652181862235
FVELFHRL	8	Unmodified	_FVELFHRL_					0	0	0			REV__ENSG00000146966|ENST00000496613|DENND2A	REV__ENSG00000146966|ENST00000496613|DENND2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3011352419853	2	530.800552	1059.58655	0.95595	0.00050742	0.74051	0.00039306	1.6965	0.00090048	531.301196514685	53.112	0.42979	55.081	54.927	55.357	1.9697					33	20	2	0	0	0	0.88409	1	22329	22329		6.3541	0	1	6123200	+		6481	10319	3211	3231	8119	8119					0.059140569224155115
FVENGHSESS	10	Unmodified	_FVENGHSESS_					0	0	0		nc|ENSG00000080910|P36980-2|CFHR2;ENSG00000080910|ENST00000367415|CFHR2;ENSG00000244414|ENST00000320493|CFHR1	nc|ENSG00000080910|P36980-2|CFHR2	nc|ENSG00000080910|P36980-2|CFHR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7347900271416	2	546.73326	1091.45197	2.1917	0.0011983	-0.34538	-0.00018883	1.8463	0.0010094	546.7327907596222	76.75	0.351	78.517	78.288	78.639	1.7672					24	10	3	0	0	0	0.88022	1	32183	32183		3.5965	0.70727	1	902670			6482	1013	3212	3232	8120	8120					-0.09010093080792103
FVENGHSESS	10	Unmodified	_FVENGHSESS_					0	0	0		nc|ENSG00000080910|P36980-2|CFHR2;ENSG00000080910|ENST00000367415|CFHR2;ENSG00000244414|ENST00000320493|CFHR1	nc|ENSG00000080910|P36980-2|CFHR2	nc|ENSG00000080910|P36980-2|CFHR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	546.73326	1091.45197	2.3355	0.0012769	-0.31851	-0.00017414	2.017	0.0011028	546.733380273394	77.246	0.3821	78.527	78.281	78.663	1.2809	0.0052515	1.1914E-05	NaN	3.5965	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1498000			6483	1013	3212	3232							-0.09010093080792103
FVEYRHIL	8	Unmodified	_FVEYRHIL_					0	0	0		nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-2|APAF1;ENSG00000120868|ENST00000551964|APAF1	nc|ENSG00000120868|O14727-5|APAF1	nc|ENSG00000120868|O14727-5|APAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7984496951103	2	538.798009	1075.58147	1.8701	0.0010076	-1.5799	-0.00085126	0.29017	0.00015634	538.7971673825623	65.847	0.51572	67.755	67.466	67.982	1.9085					27	16	2	0	0	0	0.86202	1	27697	27697		15.768	1.8622	1	3059300			6484	2120	3213	3233	8121	8121					0.046697530598066805
FVFAFIFSI	9	Unmodified	_FVFAFIFSI_					0	0	0			REV__tr|A0A7D7A6W0|A0A7D7A6W0_9CLOTDUF998domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09540PE=4SV=1	REV__tr|A0A7D7A6W0|A0A7D7A6W0_9CLOTDUF998domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8031494021416	2	545.802229	1089.5899	2.7422	0.0014967	-3.0997	-0.0016918	-0.35752	-0.00019513	545.8011741047254	75.997	0.62231	77.765	77.568	78.19	1.7672					39	19	3	0	0	0	0.3154	1	31937	31937		24.674	2.9272	1	1635400	+		6485	15895	3214	3234	8122	8122					0.04869306976434018
FVFMGSICR	9	Unmodified	_FVFMGSICR_					0	0	0			REV__nc|ENSG00000046653|Q13491-2|GPM6B	REV__nc|ENSG00000046653|Q13491-2|GPM6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2584106326103	2	530.259348	1058.50414	2.0216	0.001072	1.3955	0.00073995	3.4171	0.0018119	530.260130237638	38.896	1.4409	40.193	39.6	41.041	1.2961					105	47	3	0	0	0	0.27148	1	16413	16413		26.884	0.54238	1	5047000	+		6486	8605	3215	3235	8123	8123					-0.02276924472380415
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.8007690310478	2	517.799686	1033.58482	1.6396	0.000849	0.99261	0.00051397	2.6322	0.001363	517.8002784795443	97.801	0.18642	97.801	97.721	97.907	0					16	5	4	0	0	0	0.046276	2	40880	40880;40930		70.716	13.477	1	29526000			6487	1507	3216	3236	8124;8125	8124					0.06937003113830542
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1034.592089831829	1	1034.5921	1033.58482	1.4368	0.0014865	-0.18774	-0.00019423	1.2491	0.0012923	1034.5916896860404	97.802	0.18642	97.802	97.721	97.907	0					11	5	3	0	0	0	0.046276	1	40892	40892		70.716	26.309	1	17421000			6488	1507	3216	3236	8126	8126					0.06937003113830542
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.8018676638603	2	517.799686	1033.58482	2.8955	0.0014993	-1.0278	-0.00053219	1.8677	0.0009671	517.7992651160139	97.745	0.19082	97.836	97.715	97.906	0.090881					16	6	3	0	0	0	0.061246	1	40875	40875		63.563	27.519	1	14182000			6489	1507	3216	3236	8127	8127					0.06937003113830542
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.593676745892	1	1034.5921	1033.58482	3.0222	0.0031268	-1.5622	-0.0016162	1.46	0.0015105	1034.5915340388403	97.558	0.14793	97.786	97.716	97.863	0.22776					11	4	3	0	0	0	0.02596	1	41046	41046		93.883	43.028	1	85998000			6490	1507	3216	3236	8128	8128					0.06937003113830542
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.8001586794853	2	517.799686	1033.58482	3.8863	0.0020123	-3.0659	-0.0015875	0.82046	0.00042483	517.7981156662461	97.586	0.25795	97.814	97.663	97.921	0.22776					19	8	4	0	0	0	0.033521	1	41047	41047		81.864	14.52	1	70172000			6491	1507	3216	3236	8129	8129					0.06937003113830542
FVFPGELLL	9	Unmodified	_FVFPGELLL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1034.5921	1033.58482	4.0026	0.004141	-4.5502	-0.0047076	-0.54762	-0.00056656	1034.5895005483487	97.06	0.11964	97.366	97.289	97.409	0.3062	-0.17775	-0.0023019	NaN	70.716	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20505000			6492	1507	3216	3236							0.06937003113830542
FVFSRGLTPV	10	Unmodified	_FVFSRGLTPV_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.8209716677666	2	561.818941	1121.62333	1.4643	0.00082266	0.33748	0.00018961	1.8018	0.0010123	561.8195199681437	54.773	0.26054	54.773	54.627	54.888	0					12	7	2	0	0	0	0.55653	1	22815	22815		24.991	11.948	1	1439600			6493	1570	3217	3237	8130	8130					0.06738308748322197
FVFSRGLTPV	10	Unmodified	_FVFSRGLTPV_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.8210327029228	2	561.818941	1121.62333	1.8275	0.0010267	0.39537	0.00022213	2.2228	0.0012488	561.8195628831853	54.096	0.28603	54.417	54.286	54.572	0.32088					19	8	3	0	0	0	0.37288	2	22654	22654;22711		34.932	15.675	1	1126600			6494	1570	3217	3237	8131;8132	8131					0.06738308748322197
FVFSRGLTPV	10	Unmodified	_FVFSRGLTPV_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8198730349541	2	561.818941	1121.62333	0.83178	0.00046731	1.4381	0.00080794	2.2699	0.0012753	561.8197012343841	52.905	0.54469	54.306	54.089	54.633	1.4005					36	16	3	0	0	0	0.11632	3	22157	22110;22157;22200		61.09	24.584	1	10612000			6495	1570	3217	3237	8133;8134;8135	8134					0.06738308748322197
FVFSRGLTPV	10	Unmodified	_FVFSRGLTPV_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8191406130791	2	561.818941	1121.62333	1.2791	0.00071864	0.2675	0.00015029	1.5466	0.00086892	561.8189769490218	52.301	0.68256	54.273	54.078	54.76	1.9722					38	21	3	0	0	0	0.051944	3	21930	21886;21930;21969		78.06	39.909	1	11043000			6496	1570	3217	3237	8136;8137;8138	8137					0.06738308748322197
FVFVLVWLIF	10	Unmodified	_FVFVLVWLIF_					0	0	0			REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8851196169853	2	641.883553	1281.75255	2.4082	0.0015458	-1.3918	-0.00089339	1.0163	0.00065237	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	0.84024	2	34299	34249;34299		7.9102	4.3137	1	10623000	+		6497	13673	3218	3238	8139;8140	8140					0.1229469037839408
FVFVLVWLIF	10	Unmodified	_FVFVLVWLIF_					0	0	0			REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	REV__ENST00000526991.2_1_18:11852584-11852803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8830444216728	2	641.883553	1281.75255	1.4587	0.0009363	-0.90992	-0.00058406	0.54876	0.00035224	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	0.87343	1	34115	34115		4.3292	0.73274	1	9116700	+		6498	13673	3218	3238	8141	8141					0.1229469037839408
FVGPHLLIG	9	Unmodified	_FVGPHLLIG_					0	0	0		tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1912414431572	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.21	1	104.21	103.71	104.71	0								0	0	0	0.42693	1	43939	43939		0	0	1				6499	16836	3219	3239	8142	8142					0.07647269519441124
FVGRKNAAEL	10	Unmodified	_FVGRKNAAEL_					0	0	0			REV__ENST00000521468.1_1_8:124195447-124212099:+|nuORF	REV__ENST00000521468.1_1_8:124195447-124212099:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8116943240166	2	552.811648	1103.60874	2.5668	0.001419	-1.4621	-0.00080825	1.1048	0.00061072	553.3135574579474	64.1	0.37505	66.028	65.888	66.263	1.928					27	11	3	0	0	0	0.70618	1	26886	26886		18.146	0	1	4062000	+		6500	10331	3220	3240	8143	8143					0.06108236600175587
FVGTKAGNLR	10	Unmodified	_FVGTKAGNLR_					0	0	0			REV__ENSG00000136932|ENST00000375119|TRMO	REV__ENSG00000136932|ENST00000375119|TRMO	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	532.2688476443291	2	531.806365	1061.59818	0.67207	0.00035741	4.4799	0.0023824	5.152	0.0027399	532.3101927607099	51.201	0.1836	52.594	52.437	52.621	1.3938					7	5	2	0	0	0	0.12461	1	21395	21395		10.074	5.7447	1	1387500	+		6501	10002	3221	3241	8144	8144					0.06984253945756791
FVHDLVLYL	9	Unmodified	_FVHDLVLYL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.8166381716728	2	559.815867	1117.61718	1.3137	0.00073544	0.35577	0.00019917	1.6695	0.00093461	559.8159510187718	73.841	1.0073	73.841	73.55	74.557	0					107	31	5	0	0	0	0.069258	5	30725	30679;30725;30764;30809;30891		60.39	37.241	1	6203200			6502	851;2954	3222	3242	8145;8146;8147;8148;8149	8146					0.06307790516780187
FVHDLVLYL	9	Unmodified	_FVHDLVLYL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8153564333916	2	559.815867	1117.61718	2.1558	0.0012069	-1.2026	-0.00067322	0.95324	0.00053364	559.8149219941139	73.262	1.596	73.587	72.954	74.55	0.32494					134	50	4	0	0	0	0.09539	4	30633	30586;30633;30685;30737		50.855	25.152	1	9559200			6503	851;2954	3222	3242	8150;8151;8152;8153	8151					0.06307790516780187
FVHDLVLYL	9	Unmodified	_FVHDLVLYL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8178588747978	2	559.815867	1117.61718	2.135	0.0011952	2.041	0.0011426	4.1761	0.0023378	559.8159443837069	71.974	1.0509	73.315	73.061	74.112	1.3415					112	33	5	0	0	0	0.076627	1	30278	30278		57.471	21.005	1	21044000			6504	851;2954	3222	3242	8154	8154					0.06307790516780187
FVHDLVLYL	9	Unmodified	_FVHDLVLYL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8168212771416	2	559.815867	1117.61718	1.9214	0.0010756	1.1342	0.00063495	3.0556	0.0017106	559.8156802233982	71.51	0.83884	73.334	73.065	73.904	1.824					95	26	5	0	0	0	0.03795	4	30004	29940;30004;30042;30081		77.984	30.878	1	21481000			6505	851;2954	3222	3242	8155;8156;8157;8158	8156					0.06307790516780187
FVHLSPLSLPR	11	Unmodified	_FVHLSPLSLPR_					0	0	0			REV__nc|ENSG00000262664|Q8WZ82|OVCA2	REV__nc|ENSG00000262664|Q8WZ82|OVCA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5832397341728	3	422.583674	1264.72919	0.76371	0.00032273	-0.35118	-0.0001484	0.41253	0.00017433	422.5833746934395	95.625	0.23829	95.625	95.483	95.721	0					12	7	2	0	0	0	1.0214	1	39974	39974		1.0136	0	1	1433300	+		6506	12203	3223	3243	8159	8159					0.10741644593804267
FVHLSPLSLPR	11	Unmodified	_FVHLSPLSLPR_					0	0	0			REV__nc|ENSG00000262664|Q8WZ82|OVCA2	REV__nc|ENSG00000262664|Q8WZ82|OVCA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	422.583674	1264.72919	0.76371	0.00032273	-0.35118	-0.0001484	0.41253	0.00017433	422.5833746934395	95.625	0.23829	95.625	95.483	95.721	0	-0.036606	0.00070041	NaN	1.0136	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1433300	+		6507	12203	3223	3243							0.10741644593804267
FVHLSPLSLPR	11	Unmodified	_FVHLSPLSLPR_					0	0	0			REV__nc|ENSG00000262664|Q8WZ82|OVCA2	REV__nc|ENSG00000262664|Q8WZ82|OVCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	422.583674	1264.72919	2.9981	0.0012669	-2.2615	-0.00095568	0.73658	0.00031127	422.5826026696649	95.575	0.23431	95.698	95.537	95.772	0.12331	0.036606	-0.0017214	NaN	1.0136	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	840910	+		6508	12203	3223	3243							0.10741644593804267
FVIAELVNV	9	Unmodified	_FVIAELVNV_					0	0	0		ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2973205447197	2	502.294768	1002.57498	2.4365	0.0012238	0.44026	0.00022114	2.8768	0.001445	502.29548613772744	84.841	0.31998	84.841	84.683	85.003	0					16	9	2	0	0	0	0.15478	1	35356	35356		38.151	17.698	1	1198300			6509	5448	3224	3244	8160	8160					0.07379815108424737
FVIAELVNV	9	Unmodified	_FVIAELVNV_					0	0	0		ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2991515994072	2	502.294768	1002.57498	3.0021	0.0015079	2.8152	0.0014141	5.8173	0.002922	502.29656473141233	84.351	0.35313	84.612	84.437	84.79	0.26083					16	10	2	0	0	0	0.15478	2	35275	35275;35328		38.151	20.016	1	1075300			6510	5448	3224	3244	8161;8162	8161					0.07379815108424737
FVIAELVNV	9	Unmodified	_FVIAELVNV_					0	0	0		ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2966491580009	2	502.294768	1002.57498	2.0111	0.0010102	-0.44069	-0.00022136	1.5704	0.0007888	502.294562256985	83.469	0.43898	84.657	84.452	84.89	1.1879					22	13	2	0	0	0	0.10722	2	35017	35017;35067		46.921	22.247	1	4488500			6511	5448	3224	3244	8163;8164	8163					0.07379815108424737
FVIAELVNV	9	Unmodified	_FVIAELVNV_					0	0	0		ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	ENSG00000272047|ENST00000607778|GTF2H5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2961913943291	2	502.294768	1002.57498	1.9625	0.00098574	-0.41818	-0.00021005	1.5443	0.00077569	502.2945756188778	83.014	0.34496	84.652	84.478	84.823	1.6379					24	10	3	0	0	0	0.033521	2	34817	34817;34869		81.864	34.943	1	5393500			6512	5448	3224	3244	8165;8166	8165					0.07379815108424737
FVIDLQTRL	9	Unmodified	_FVIDLQTRL_					0	0	0		nc|ENSG00000131051|Q14498-3|RBM39;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENSG00000131051|ENST00000253363|RBM39;LTBP4-RBM39|5|fusion;LTBP4-RBM39|3|fusion;LTBP4-RBM39|1|fusion	nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8251830935478	2	552.824224	1103.63389	1.5009	0.00082974	1.6903	0.00093444	3.1912	0.0017642	552.8250798282398	64.459	0.22667	64.459	64.333	64.56	0					10	6	2	0	0	0	0.50272	1	26890	26890		15.248	3.0078	1	413800			6513	7868	3225	3245	8167	8167					0.08622291402753035
FVIDLQTRL	9	Unmodified	_FVIDLQTRL_					0	0	0		nc|ENSG00000131051|Q14498-3|RBM39;ENST00000471635.5_1_20:34297104-34301010:-|nuORF;ENST00000492779.5_1_20:34292405-34320086:-|nuORF;ENST00000429968.5_1_20:34292405-34322136:-|nuORF;ENSG00000131051|ENST00000253363|RBM39;LTBP4-RBM39|5|fusion;LTBP4-RBM39|3|fusion;LTBP4-RBM39|1|fusion	nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.2928954958916	2	552.824224	1103.63389	2.7908	0.0015428	2.7707	0.0015317	5.5615	0.0030746	552.8278525277594	62.689	0.23864	64.102	63.987	64.226	1.4134					19	7	4	0	0	0	0.093582	1	26273	26273		22.658	7.8198	1	2198900			6514	7868	3225	3245	8168	8168					0.08622291402753035
FVIENESPSGR	11	Unmodified	_FVIENESPSGR_					0	0	0		ENST00000494958.1_1_2:62934317-63053404:+|nuORF;ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1	ENST00000494958.1_1_2:62934317-63053404:+|nuORF	ENST00000494958.1_1_2:62934317-63053404:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.8102294802666	2	617.806759	1233.59897	1.3988	0.00086419	4.2539	0.0026281	5.6527	0.0034923	617.8090883852948	42.877	0.22087	44.217	44.077	44.298	1.3399					9	6	2	0	0	0	0.31168	1	17982	17982		31.268	5.869	1	1054800			6515	1925	3226	3246	8169	8169					-0.008489961958730419
FVIENESPSGR	11	Unmodified	_FVIENESPSGR_					0	0	0		ENST00000494958.1_1_2:62934317-63053404:+|nuORF;ENSG00000115504|ENST00000431489|EHBP1;nc|ENSG00000115504|Q8NDI1-2|EHBP1;nc|ENSG00000115504|Q8NDI1|EHBP1	ENST00000494958.1_1_2:62934317-63053404:+|nuORF	ENST00000494958.1_1_2:62934317-63053404:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8087646365166	2	617.806759	1233.59897	1.4345	0.00088621	1.1694	0.00072245	2.6038	0.0016087	617.8073703188245	42.276	0.21739	44.197	44.072	44.29	1.9211					11	6	2	0	0	0	0.42228	1	17706	17706		26.268	0.86883	1	954860			6516	1925	3226	3246	8170	8170					-0.008489961958730419
FVIKKYFI	8	Unmodified	_FVIKKYFI_					0	0	0		tr|A0A7D7A5R4|A0A7D7A5R4_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07805PE=4SV=1	tr|A0A7D7A5R4|A0A7D7A5R4_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07805PE=4SV=1	tr|A0A7D7A5R4|A0A7D7A5R4_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07805PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.7906371951103	2	529.325871	1056.63719	2.5968	0.0013746	-0.010419	-5.5152E-06	2.5864	0.0013691	529.3258493341777	76.59	0.29118	78.357	78.222	78.514	1.7672					12	8	2	0	0	0	2.3239	1	32171	32171		15.768	4.9443	1	357260			6517	17301	3227	3247	8171	8171					0.11113586247415697
FVILHARA	8	Unmodified	_FVILHARA_					0	0	0		ENSG00000127666|ENST00000248244|TICAM1	ENSG00000127666|ENST00000248244|TICAM1	ENSG00000127666|ENST00000248244|TICAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	309.5244933962822	3	309.523867	925.549771	-0.01714	-5.3054E-06	2.0967	0.00064897	2.0795	0.00064367	309.5244554764711	23.124	0.30673	24.338	24.198	24.505	1.2145					25	9	4	0	0	0	0.89156	1	9667	9667		1.4819	0	1	7983200			6518	2344	3228	3248	8172	8172					0.08401805096502812
FVIRNIVEA	9	Unmodified	_FVIRNIVEA_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8116943240166	2	530.811116	1059.60768	1.869	0.00099207	0.22136	0.0001175	2.0903	0.0011096	530.8107022809115	47.492	0.26408	47.822	47.636	47.9	0.33034					15	8	2	0	0	0	0.18809	1	19892	19892		34.402	11.665	1	1073700			6519	5023	3229	3249	8173	8173					0.08026022231297247
FVIRNIVEA	9	Unmodified	_FVIRNIVEA_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8120605349541	2	530.811116	1059.60768	1.8533	0.00098378	0.8284	0.00043972	2.6818	0.0014235	530.8114633244688	45.849	0.37487	47.225	47.023	47.398	1.3751					26	11	3	0	0	0	0.37357	1	19175	19175		21.747	8.2388	1	2591700			6520	5023	3229	3249	8174	8174					0.08026022231297247
FVIRNIVEA	9	Unmodified	_FVIRNIVEA_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;ENST00000447425.1_1_7:22813267-22813561:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8126098513603	2	530.811116	1059.60768	1.8101	0.00096082	-0.49272	-0.00026154	1.3174	0.00069928	530.8107144971951	45.355	0.50262	47.315	46.99	47.493	1.9596					29	15	3	0	0	0	0.37357	1	18985	18985		21.747	9.2151	1	1683100			6521	5023	3229	3249	8175	8175					0.08026022231297247
FVKFIVPK	8	Unmodified	_FVKFIVPK_					0	0	0			REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.3138610720634	2	489.312764	976.610974	1.6309	0.00079803	0.71673	0.0003507	2.3476	0.0011487	489.31312168763304	79.04	0.88318	79.04	78.662	79.545	0					96	28	5	0	0	0	0.89178	2	32934	32934;32973		0.69038	0	1	204060000	+		6522	14518	3230	3250	8176;8177	8176					0.12173317075939849
FVKFIVPK	8	Unmodified	_FVKFIVPK_					0	0	0			REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3149291872978	2	489.312764	976.610974	2.3932	0.001171	0.64483	0.00031552	3.038	0.0014866	489.31311809386244	78.873	0.73534	79.182	78.769	79.505	0.30933					82	23	5	0	0	0	0.89178	2	32914	32914;32993		0.69038	0	1	172780000	+		6523	14518	3230	3250	8178;8179	8178					0.12173317075939849
FVKFIVPK	8	Unmodified	_FVKFIVPK_					0	0	0			REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	REV__nc|ENSG00000196208|Q4ZG55-3|GREB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.3157226443291	2	489.312764	976.610974	2.5513	0.0012484	2.5042	0.0012254	5.0556	0.0024737	489.3139544120919	77.992	0.60844	79.273	78.918	79.527	1.2809					68	19	5	0	0	0	0.89178	2	32671	32671;32722		0.69038	0	1	74892000	+		6524	14518	3230	3250	8180;8181	8180					0.12173317075939849
FVLAIWLV	8	Unmodified	_FVLAIWLV_					0	0	0			REV__ENSG00000134255|ENST00000357172|CEPT1	REV__ENSG00000134255|ENST00000357172|CEPT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	481.2810241580009	2	480.799489	959.584425	1.1745	0.00056468	3.067	0.0014746	4.2415	0.0020393	480.80089105828137	77.614	0.98528	79.366	78.946	79.932	1.7514					84	31	5	0	0	0	2.3239	1	32764	32764		0.79363	0	1	133980000	+		6525	9899	3231	3251	8182	8182					0.10301628184618039
FVLEGLEHL	9	Unmodified	_FVLEGLEHL_					0	0	0			REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7925292849541	2	528.78985	1055.56515	3.6874	0.0019499	-0.23972	-0.00012676	3.4477	0.0018231	528.7898484445162	97.578	0.14793	97.806	97.716	97.863	0.22776					10	4	3	0	0	0	0.1735	1	41058	41058		36.044	5.8194	1	7501300	+		6526	13830	3232	3252	8183	8183					0.03958627103043
FVLEGLEHL	9	Unmodified	_FVLEGLEHL_					0	0	0			REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7925903201103	2	528.78985	1055.56515	3.4038	0.0017999	-0.10876	-5.7509E-05	3.2951	0.0017424	528.7895942619588	97.472	0.23806	97.778	97.685	97.923	0.3062					11	7	3	0	0	0	0.1735	1	41002	41002		36.044	0	1	8636100	+		6527	13830	3232	3252	8184	8184					0.03958627103043
FVLEGLEHL	9	Unmodified	_FVLEGLEHL_					0	0	0			REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	REV__ENST00000551270.1_1_12:104283206-104309165:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	528.78985	1055.56515	3.6874	0.0019499	-0.23972	-0.00012676	3.4477	0.0018231	528.7898484445162	97.578	0.14793	97.806	97.716	97.863	0.22776	0.013947	-3.8748E-05	NaN	36.044	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7501300	+		6528	13830	3232	3252							0.03958627103043
FVLGEASGFV	10	Unmodified	_FVLGEASGFV_					0	0	0		nc|ENSG00000178996|Q96RF0-3|SNX18;ENSG00000178996|ENST00000381410|SNX18;nc|ENSG00000178996|Q96RF0|SNX18	nc|ENSG00000178996|Q96RF0-3|SNX18	nc|ENSG00000178996|Q96RF0-3|SNX18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2709228396416	2	513.26875	1024.52295	2.0764	0.0010657	-0.085689	-4.3981E-05	1.9907	0.0010218	513.2686811264332	65.401	0.37971	65.728	65.517	65.896	0.32689					17	11	3	0	0	0	0.84024	1	27370	27370		7.9102	1.5561	1	1373400			6529	4500	3233	3253	8185	8185					0.011666516946661432
FVLLDLGMLM	10	Unmodified	_FVLLDLGMLM_					0	0	0			REV__nc|ENSG00000074416|Q99685-2|MGLL	REV__nc|ENSG00000074416|Q99685-2|MGLL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3112060427666	2	576.313789	1150.61302	1.0396	0.00059915	-0.86546	-0.00049878	0.17416	0.00010037	576.816243914173	56.391	0.45461	58.36	58.149	58.603	1.9684					35	14	3	0	0	0	0.65574	1	23706	23706		20.454	1.1966	1	6877400	+		6530	8750	3234	3254	8186	8186					0.04374241707228066
FVLLIKMK	8	Unmodified	_FVLLIKMK_					0	0	0			REV__ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	REV__ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3246032595634	2	496.322274	990.629995	2.0849	0.0010348	1.584	0.0007862	3.669	0.001821	496.32299432263886	89.33	0.4109	89.33	89.115	89.526	0					26	12	3	0	0	0	0.89178	1	37309	37309		0.69038	0	1	2005400	+		6531	8475	3235	3255	8187	8187					0.13430530375353555
FVLLLPLWLW	10	Unmodified	_FVLLLPLWLW_					0	0	0			REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|57|1|anti-sense	REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|57|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3973876833916	2	650.396828	1298.7791	1.4975	0.00097394	-1.1732	-0.00076306	0.32423	0.00021088	650.395630949906	79.739	0.55715	81.456	81.106	81.663	1.7167					38	17	3	0	0	0	0.89646	1	33501	33501		1.8442	0.19162	1	2691500	+		6532	14323	3236	3256	8188	8188					0.14166379269749996
FVLLLPLWLW	10	Unmodified	_FVLLLPLWLW_					0	0	0			REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|57|1|anti-sense	REV__L1PA7_dup282|chr1:88818677-88820142:+|1.0289078366989055|0.4624574098713206|1.15|428.0|57|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3975707888603	2	650.396828	1298.7791	1.4428	0.00093839	-2.0835	-0.0013551	-0.64074	-0.00041674	650.3954296335871	80.232	1.1244	81.948	81.631	82.755	1.7167					53	36	2	0	0	0	0.89646	1	33847	33847		1.8442	0	1	7773900	+		6533	14323	3236	3256	8189	8189					0.14166379269749996
FVLMASYLI	9	Unmodified	_FVLMASYLI_					0	0	0		ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.7924072146416	2	528.793546	1055.57254	1.4957	0.00079089	-3.2943	-0.001742	-1.7986	-0.00095111	528.791708139649	97.801	0.15583	97.801	97.721	97.877	0					7	4	2	0	0	0	0.09539	1	40896	40896		50.855	8.7605	1	5133700			6534	4412	3237	3257	8190	8190					0.0469764337910874
FVLMASYLI	9	Unmodified	_FVLMASYLI_					0	0	0		ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	ENSG00000176567|ENST00000320048|OR4X1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	528.793546	1055.57254	2.8768	0.0015212	-6.0159	-0.0031812	-3.1392	-0.00166	528.789955839862	97.721	0.12318	97.812	97.715	97.838	0.090881	0.0058512	-0.0025327	NaN	50.855	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1294100			6535	4412	3237	3257							0.0469764337910874
FVLPELPSV	9	Unmodified	_FVLPELPSV_					0	0	0		ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7898742556572	2	500.789318	999.564084	2.4862	0.0012451	-0.18409	-9.219E-05	2.3021	0.0011529	500.7889331530622	85.774	0.37447	85.774	85.54	85.914	0					29	11	3	0	0	0	0.031324	3	35729	35682;35729;35787		85.357	53.051	1	3633600			6536	4598	3238	3258	8191;8192;8193	8192					0.06428412734157973
FVLPELPSV	9	Unmodified	_FVLPELPSV_					0	0	0		ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7896606326103	2	500.789318	999.564084	3.1399	0.0015724	-0.58903	-0.00029498	2.5508	0.0012774	500.7886273954968	85.272	0.37371	85.524	85.291	85.665	0.25227					28	11	3	0	0	0	0.031324	3	35651	35602;35651;35703		85.357	45.399	1	3102600			6537	4598	3238	3258	8194;8195;8196	8195					0.06428412734157973
FVLPELPSV	9	Unmodified	_FVLPELPSV_					0	0	0		ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7909728884697	2	500.789318	999.564084	1.8423	0.00092261	1.5295	0.00076595	3.3718	0.0016886	500.78995295696154	84.436	0.44073	85.595	85.341	85.782	1.159					33	13	3	0	0	0	0.0001133	4	35414	35366;35414;35451;35498		146.01	60.651	1	9193900			6538	4598	3238	3258	8197;8198;8199;8200	8198					0.06428412734157973
FVLPELPSV	9	Unmodified	_FVLPELPSV_					0	0	0		ENST00000536027.1_1_16:71958181-71961713:+|nuORF;ENST00000541180.1_1_16:71958590-71961713:+|nuORF;nc|ENSG00000182149|P53990-6|IST1;nc|ENSG00000182149|P53990-2|IST1;nc|ENSG00000182149|P53990|IST1;ENSG00000182149|ENST00000378799|IST1;nc|ENSG00000182149|P53990-5|IST1	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	ENST00000536027.1_1_16:71958181-71961713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7901489138603	2	500.789318	999.564084	1.728	0.00086534	0.069976	3.5043E-05	1.7979	0.00090038	500.7891665998212	83.936	0.40068	85.574	85.38	85.78	1.6379					33	12	4	0	0	0	0.0017386	3	35219	35177;35219;35263		131.3	70.908	1	10392000			6539	4598	3238	3258	8201;8202;8203	8202					0.06428412734157973
FVLTEFYKW	9	Unmodified	_FVLTEFYKW_					0	0	0			REV__tr|A0A7D6VUK4|A0A7D6VUK4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01955PE=4SV=1	REV__tr|A0A7D6VUK4|A0A7D6VUK4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01955PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8232299685478	2	616.82115	1231.62775	3.0415	0.001876	0.098566	6.0798E-05	3.14	0.0019368	616.8208979256357	96.016	0.21892	96.418	96.272	96.491	0.40208					13	6	3	0	0	0	0.54523	1	40397	40397		13.508	0.46542	1	4923400	+		6540	15518	3239	3259	8204	8204					0.02119773171216366
FVLTEFYKW	9	Unmodified	_FVLTEFYKW_					0	0	0			REV__tr|A0A7D6VUK4|A0A7D6VUK4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01955PE=4SV=1	REV__tr|A0A7D6VUK4|A0A7D6VUK4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01955PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	616.82115	1231.62775	3.0415	0.001876	0.098566	6.0798E-05	3.14	0.0019368	616.8208979256357	96.016	0.21892	96.418	96.272	96.491	0.40208	-0.099802	2.882E-05	NaN	13.508	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4923400	+		6541	15518	3239	3259							0.02119773171216366
FVMETFVHL	9	Unmodified	_FVMETFVHL_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.7856323122978	2	561.786253	1121.55795	1.2469	0.00070047	-1.7054	-0.00095806	-0.45852	-0.00025759	561.7850495641441	71.996	0.47382	71.996	71.764	72.237	0					31	14	3	0	0	0	0.046276	2	29966	29966;30017		70.716	44.447	1	2652600			6542	1534	3240	3260	8205;8206	8205					0.0020357123098619923
FVMETFVHL	9	Unmodified	_FVMETFVHL_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.7841674685478	2	561.786253	1121.55795	1.5033	0.00084451	-4.3524	-0.0024451	-2.8492	-0.0016006	561.783470473653	71.341	0.63879	71.664	71.367	72.006	0.32359					45	19	4	0	0	0	0.10722	2	29839	29839;29893		46.921	29.979	1	2432000			6543	1534	3240	3260	8207;8208	8207					0.0020357123098619923
FVMQERAEI	9	Unmodified	_FVMQERAEI_					0	0	0			REV__tr|A0A553SM84|A0A553SM84_NIACIIron-containingalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_22025PE=3SV=1	REV__tr|A0A553SM84|A0A553SM84_NIACIIron-containingalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_22025PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7843505740166	2	561.784241	1121.55393	2.6454	0.0014861	-1.5967	-0.00089698	1.0487	0.00058914	561.783370537405	69.659	0.59804	71.512	71.136	71.734	1.853					38	15	4	0	0	0	0.30098	1	29210	29210		25.399	1.6095	1	10162000	+		6544	15010	3241	3261	8209	8209					-0.0019851826273225015
FVPDDQRNL	9	Unmodified	_FVPDDQRNL_					0	0	0		tr|A0A553SHI3|A0A553SHI3_NIACI4-diphosphocytidyl-2-C-methyl-D-erythritolkinaseOS=NialliacirculansOX=1397GN=ispEPE=3SV=1	tr|A0A553SHI3|A0A553SHI3_NIACI4-diphosphocytidyl-2-C-methyl-D-erythritolkinaseOS=NialliacirculansOX=1397GN=ispEPE=3SV=1	tr|A0A553SHI3|A0A553SHI3_NIACI4-diphosphocytidyl-2-C-methyl-D-erythritolkinaseOS=NialliacirculansOX=1397GN=ispEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2737914919853	2	552.277638	1102.54072	1.8029	0.00099569	1.3488	0.00074492	3.1517	0.0017406	552.2783461165141	43.635	0.54926	44.989	44.735	45.284	1.3536					51	17	4	0	0	0	0.49082	1	18368	18368		15.847	1.0089	1	14222000			6545	16153	3242	3262	8210	8210					-0.0064463305047866015
FVQEEKIF	8	Unmodified	_FVQEEKIF_					0	0	0		ENSG00000130560|ENST00000371756|UBAC1;UBAC1|p.E248Rfs*21|1|0.12|ENSG00000130560|chr9:135945166-135945167|-/A|frameshift_variant	ENSG00000130560|ENST00000371756|UBAC1	ENSG00000130560|ENST00000371756|UBAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2765380740166	2	520.276575	1038.5386	2.2377	0.0011642	0.15206	7.9112E-05	2.3898	0.0012433	520.2765351231491	76.73	0.79651	78.498	77.972	78.768	1.7672					49	24	3	0	0	0	0.87106	1	32261	32261		14.582	2.0501	1	17008000			6546	2442	3243	3263	8211	8211					0.020869382117098212
FVQQSTSLL	9	Unmodified	_FVQQSTSLL_					0	0	0		PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant;ENSG00000205038|ENST00000378402|PKHD1L1	PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant	PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7776977419853	2	511.779482	1021.54441	2.3633	0.0012095	0.21186	0.00010843	2.5751	0.0013179	511.7806579306789	83.936	0.18405	85.574	85.501	85.685	1.6379					9	5	2	0	0	0	0.37357	1	35203	35203		21.747	0	1	1785500			6547	5172	3244	3264	8212	8212					0.03450036723404537
FVSKKKKKS	9	Unmodified	_FVSKKKKKS_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3499023318291	2	540.350409	1078.68626	3.3463	0.0018082	-3.2751	-0.0017697	0.071246	3.8498E-05	540.3487376327022	92.714	0.25732	93.991	93.908	94.165	1.277					13	7	2	0	0	0	0.84963	1	39018	39018		0.6015	0	1	632770	+		6548	8296	3245	3265	8213	8213					0.15006874536379655
FVSKKKKKS	9	Unmodified	_FVSKKKKKS_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	540.350409	1078.68626	4.263	0.0023035	-3.2267	-0.0017436	1.0363	0.00055994	540.3487033900553	93.109	0.29391	93.981	93.834	94.128	0.87176	0.011799	-0.00047042	NaN	0.6015	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	762860	+		6549	8296	3245	3265							0.15006874536379655
FVSKKKKKS	9	Unmodified	_FVSKKKKKS_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|2|FAM168B,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	540.350409	1078.68626	3.3463	0.0018082	-3.2751	-0.0017697	0.071246	3.8498E-05	540.3487376327022	92.714	0.25732	93.991	93.908	94.165	1.277	0.021662	-0.00052265	NaN	0.6015	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	632770	+		6550	8296	3245	3265							0.15006874536379655
FVSQHFCSV	9	Unmodified	_FVSQHFCSV_					0	0	0		ENST00000372806.7_1_20:43703856-43703970:+|nuORF	ENST00000372806.7_1_20:43703856-43703970:+|nuORF	ENST00000372806.7_1_20:43703856-43703970:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2477905154228	2	527.244752	1052.47495	1.7969	0.00094742	2.957	0.0015591	4.754	0.0025065	527.2464343717832	84.423	0.34663	85.582	85.402	85.749	1.159					21	10	3	0	0	0	0.66839	1	35448	35448		8.5933	0.68312	1	1578600			6551	6147	3246	3266	8214	8214					-0.049187454970251565
FVSQHFCSV	9	Unmodified	_FVSQHFCSV_					0	0	0		ENST00000372806.7_1_20:43703856-43703970:+|nuORF	ENST00000372806.7_1_20:43703856-43703970:+|nuORF	ENST00000372806.7_1_20:43703856-43703970:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	527.244752	1052.47495	2.7225	0.0014354	1.4905	0.00078586	4.2131	0.0022213	527.2455985151022	85.253	0.34079	85.505	85.354	85.695	0.25227	-0.093986	-0.00022993	NaN	8.5933	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	446700			6552	6147	3246	3266							-0.049187454970251565
FVTVWLRHYNP	11	Unmodified	_FVTVWLRHYNP_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	716.3849975466728	2	716.380229	1430.7459	4.0216	0.002881	3.3832	0.0024236	7.4048	0.0053046	716.3832373755769	87.027	0.43369	88.522	88.332	88.766	1.4953					26	13	3	0	0	0	0.95983	1	36681	36681		6.2058	0.9089	1	1533400			6553	4729	3247	3267	8215	8215					0.04776145479763727
FVTVWLRHYNP	11	Unmodified	_FVTVWLRHYNP_					0	0	0		ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	ENSG00000185038|ENST00000389758|MROH2A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	716.380229	1430.7459	4.0924	0.0029317	3.5725	0.0025593	7.6649	0.005491	716.382664391531	87.469	0.46655	88.561	88.428	88.895	1.0918	0.019325	0.00016599	NaN	6.2058	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	975630			6554	4729	3247	3267							0.04776145479763727
FVVLHWKKL	9	Unmodified	_FVVLHWKKL_					0	0	0			REV__tr|A0A7D7A1K8|A0A7D7A1K8_9CLOTTIGR03987familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15780PE=4SV=1	REV__tr|A0A7D7A1K8|A0A7D7A1K8_9CLOTTIGR03987familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15780PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3657714724541	2	585.363319	1168.71209	2.6526	0.0015527	1.6632	0.00097355	4.3157	0.0025263	585.3645363556774	85.732	0.93567	85.732	85.196	86.132	0					46	29	2	0	0	0	0.84963	1	35761	35761		0.6015	0	1	1086000	+		6555	15828	3248	3268	8216	8216					0.134477687786557
FVWDLRFRRHR	11	Unmodified	_FVWDLRFRRHR_					0	0	0			REV__nc|ENSG00000167702|Q96AC6|KIFC2;REV__ENSG00000167702|ENST00000645548|KIFC2	REV__ENSG00000167702|ENST00000645548|KIFC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.9660522341728	3	529.963771	1586.86948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.101	1	47.432	46.932	47.932	0.33034								0	0	0	0.63775	1	19758	19758		0.40827	0.26837	1		+		6556	14481;10875	3249	3269	8217	8217					0.0995224137070636
FVYENPISL	9	Unmodified	_FVYENPISL_					0	0	0		ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2;RSBN1L-RHBDD2|1|fusion	ENSG00000005486|ENST00000006777|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2826415896416	2	541.281857	1080.54916	1.9765	0.0010698	0.16124	8.7274E-05	2.1377	0.0011571	541.2820247089409	66.469	0.43082	67.858	67.596	68.027	1.3888					36	13	4	0	0	0	0.083604	3	27837	27837;27886;27932		54.774	29.374	1	9381200			6557	490	3250	3270	8218;8219;8220	8218					0.012109208661513549
FVYENPISL	9	Unmodified	_FVYENPISL_					0	0	0		ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2;RSBN1L-RHBDD2|1|fusion	ENSG00000005486|ENST00000006777|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1081.560351550579	1	1081.55644	1080.54916	1.9143	0.0020704	0.55418	0.00059938	2.4685	0.0026698	1081.557123395306	66.435	0.4605	67.823	67.566	68.027	1.3888					35	14	3	0	0	0	0.028318	2	27889	27839;27889		90.135	47.114	1	4875300			6558	490	3250	3270	8221;8222	8222					0.012109208661513549
FVYENPISL	9	Unmodified	_FVYENPISL_					0	0	0		ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2;RSBN1L-RHBDD2|1|fusion	ENSG00000005486|ENST00000006777|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2833740115166	2	541.281857	1080.54916	1.7986	0.00097354	0.023477	1.2708E-05	1.8221	0.00098625	541.2819264478117	65.998	0.40088	67.906	67.706	68.107	1.9085					24	12	3	0	0	0	0.059546	3	27657	27657;27703;27748		64.236	31.931	1	9919100			6559	490	3250	3270	8223;8224;8225	8223					0.012109208661513549
FVYENPISL	9	Unmodified	_FVYENPISL_					0	0	0		ENSG00000005486|ENST00000006777|RHBDD2;nc|ENSG00000005486|Q6NTF9-2|RHBDD2;RSBN1L-RHBDD2|1|fusion	ENSG00000005486|ENST00000006777|RHBDD2	ENSG00000005486|ENST00000006777|RHBDD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1081.557421863079	1	1081.55644	1080.54916	1.9961	0.0021589	-0.26748	-0.0002893	1.7286	0.0018696	1081.5557866090458	65.967	0.65826	67.875	67.735	68.393	1.9085					37	20	3	0	0	0	0.02878	2	27717	27667;27717		89.401	49.451	1	3992200			6560	490	3250	3270	8226;8227	8227					0.012109208661513549
FVYKYKSAF	9	Unmodified	_FVYKYKSAF_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	576.3121215701103	2	576.808042	1151.60153	2.8648	0.0016524	3.1578	0.0018215	6.0226	0.0034739	576.8097895688886	62.799	0.54992	64.212	64.016	64.566	1.4134					32	17	2	0	0	0	0.11463	1	26398	26398		4.3292	0	1	2247100	+		6561	14645	3251	3271	8228	8228					0.03179503999740518
FVYPGNPLRH	10	Unmodified	_FVYPGNPLRH_					0	0	0		ENSG00000112584|ENST00000476287|FAM120B;nc|ENSG00000112584|Q96EK7-2|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.7404968142509	3	400.548852	1198.62473	0.72286	0.00028954	1.1967	0.00047934	1.9196	0.00076888	400.54940465067625	31.344	0.37548	33.168	32.926	33.302	1.8246					20	12	2	0	0	0	0.12538	1	13173	13173		5.7834	2.7112	1	551980			6562	1789	3252	3272	8229	8229					0.033359428370886235
FVYPGNPLRH	10	Unmodified	_FVYPGNPLRH_					0	0	0		ENSG00000112584|ENST00000476287|FAM120B;nc|ENSG00000112584|Q96EK7-2|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	400.548852	1198.62473	0.20655	8.2732E-05	0.88778	0.0003556	1.0943	0.00043833	400.5491970523138	31.857	0.38064	33.139	32.926	33.307	1.2813	-0.014801	-0.00013944	NaN	5.7834	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	693420			6563	1789	3252	3272							0.033359428370886235
FVYQQFDL	8	Unmodified	_FVYQQFDL_					0	0	0			REV__ENSG00000171492|ENST00000337338|LRRC8D	REV__ENSG00000171492|ENST00000337338|LRRC8D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2604858279228	2	530.260925	1058.5073	1.2344	0.00065457	-0.6289	-0.00033348	0.60553	0.00032109	530.260543625724	38.046	1.4416	39.866	39.517	40.959	1.8202					115	45	3	0	0	0	0.66111	1	16161	16161		34.187	3.5508	1	4408100	+		6564	11029	3253	3273	8230	8230					-0.019616348223962632
FVYQSLTQI	9	Unmodified	_FVYQSLTQI_					0	0	0			REV__ENST00000412768.1_1_9:94897097-94898934:+|nuORF	REV__ENST00000412768.1_1_9:94897097-94898934:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7966186404228	2	549.795132	1097.57571	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.483	1	67.872	67.372	68.372	1.3888								0	0	0	0.30487	1	27890	27890		18.135	4.6271	1		+		6565	12927	3254	3274	8231	8231					0.030826097574845335
FWAAILKICL	10	Unmodified	_FWAAILKICL_					0	0	0			REV__nc|ENSG00000185101|A1A5B4-2|ANO9	REV__nc|ENSG00000185101|A1A5B4-2|ANO9	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3439819216728	2	589.343738	1176.67292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.202	1	76.202	75.702	76.702	0								0	0	0	0.66155	1	31720	31720		1.8442	0	1		+		6566	11448	3255	3275	8232	8232					0.09165300432778167
FWDWKKGEK	9	Unmodified	_FWDWKKGEK_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6;ENST00000493997.1_1_2:55096258-55106778:+|nuORF	nc|ENSG00000214595|Q6ZMW3-2|EML6	nc|ENSG00000214595|Q6ZMW3-2|EML6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5441467165947	3	408.545108	1222.61349	-0.72954	-0.00029805	-1.356	-0.000554	-2.0856	-0.00085205	408.5446707320336	14.024	1.3925	14.024	13.887	15.28	0					98	44	4	0	0	0	0.7849	1	6113	6113		2.2828	0.3764	1	17343000			6567	5242	3256	3276	8233	8233					0.011091207429444694
FWEDYRHNWRK	11	Unmodified	_FWEDYRHNWRK_					0	0	0			REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2653686404228	3	546.263774	1635.76949	0.23568	0.00012875	2.1453	0.0011719	2.381	0.0013007	546.2651704225208	34.473	0.047493	35.747	35.729	35.777	1.2746					5	3	2	0	0	0	1.039	1	14473	14473		0.45452	0.35968	1	6066300	+		6568	8567	3257	3277	8234	8234					-0.02296040753753914
FWEEDKHA	8	Unmodified	_FWEEDKHA_					0	0	0			REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	REV__nc|ENSG00000087087|Q9BXP5-5|SRRT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0700256228447	3	354.494413	1060.46141	2.1908	0.00077664	-1.593	-0.00056471	0.59782	0.00021192	354.49393740560345	73.248	0.2501	75.058	74.957	75.207	1.8101					13	7	2	0	0	0	2.3239	1	30740	30740		1.6526	0.95496	1	502840	+		6569	8866	3258	3278	8235	8235					-0.0664028000462622
FWFFFPYNHYY	11	Unmodified	_FWFFFPYNHYY_					0	0	0			REV__ENST00000605924.5_1_13:52793665-52801187:-|nuORF	REV__ENST00000605924.5_1_13:52793665-52801187:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	815.8066284060478	2	815.861338	1629.70812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.428	1	95.552	95.052	96.052	0.12331								0	0	0	0.63775	1	39933	39933		0.35063	0	1		+		6570	14135	3259	3279	8236	8236					-0.0815436550569757
FWFLVRML	8	Unmodified	_FWFLVRML_					0	0	0			REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.3083984255791	2	556.309698	1110.60484	1.2086	0.00067233	0.57892	0.00032206	1.7875	0.00099439	556.3083206636995	72.656	0.50596	72.656	72.427	72.933	0					24	15	3	0	0	0	0.89008	1	30277	30277		2.5775	0.078994	1	451430	+		6571	12796	3260	3280	8237	8237					0.05396475572752024
FWFLVRML	8	Unmodified	_FWFLVRML_					0	0	0			REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	556.309698	1110.60484	1.2086	0.00067233	0.57892	0.00032206	1.7875	0.00099439	556.3083206636995	72.656	0.50596	72.656	72.427	72.933	0	0.076029	0.00068205	NaN	2.5775	24	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	451430	+		6572	12796	3260	3280							0.05396475572752024
FWFLVRML	8	Unmodified	_FWFLVRML_					0	0	0			REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	REV__ENST00000392350.7_1_2:190635870-190636011:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	556.309698	1110.60484	1.0998	0.00061182	-0.71195	-0.00039607	0.38784	0.00021576	556.3095783320225	70.666	0.091278	72.504	72.441	72.532	1.8378	-0.076029	-0.0007542	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	236270	+		6573	12796	3260	3280							0.05396475572752024
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	830.9003173708916	2	830.899325	1659.7841	2.0303	0.001687	1.2324	0.001024	3.2627	0.0027109	830.9005375364491	49.281	5.1479	49.281	48.028	53.176	0					397	165	4	0	0	0	1.0405	31	20172	20172;20218;20266;20313;20353;20391;20433;20483;20534;20583;20623;20661;20709;20750;20799;20843;20885;20928;20971;21013;21066;21118;21168;21224;21274;21330;21378;21483;21687;21835;21889		0	0	1	7380000			6574	6359	3261	3281	8238;8239;8240;8241;8242;8243;8244;8245;8246;8247;8248;8249;8250;8251;8252;8253;8254;8255;8256;8257;8258;8259;8260;8261;8262;8263;8264;8265;8266;8267;8268	8238					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.4006225466728	2	830.899325	1659.7841	1.9182	0.0015938	-0.90913	-0.0007554	1.0091	0.00083843	831.4001852618762	54.652	0.83145	54.652	54.216	55.047	0					78	27	4	0	0	0	1.0395	6	22776	22637;22680;22730;22776;22820;22881		0.30703	0.30703	1	1631300			6575	6359	3261	3281	8269;8270;8271;8272;8273;8274	8272					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	830.9011718630791	2	830.899325	1659.7841	1.8716	0.0015551	0.22956	0.00019074	2.1011	0.0017458	831.4008458237728	56.656	1.1402	56.656	56.113	57.253	0					89	38	3	0	0	0	1.0405	5	23480	23480;23533;23595;23793;23835		0	0	1	1251000			6576	6359	3261	3281	8275;8276;8277;8278;8279	8275					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.3990356326103	2	830.899325	1659.7841	1.9486	0.0016191	0.33371	0.00027728	2.2823	0.0018964	831.4008154884175	57.904	1.6824	57.904	57.479	59.161	0					103	52	3	0	0	0	1.0405	5	24088	24088;24154;24204;24272;24335		0	0	1	1022000			6577	6359	3261	3281	8280;8281;8282;8283;8284	8280					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	831.4035522341728	2	830.899325	1659.7841	1.9801	0.0016453	1.5923	0.001323	3.5724	0.0029683	830.9005211724899	47.593	1.5975	48.976	48.567	50.165	1.3825					157	50	5	0	0	0	1.0405	10	19802	19802;19849;19898;19936;19977;20033;20086;20136;20189;20271		0	0	1	13913000			6578	6359	3261	3281	8285;8286;8287;8288;8289;8290;8291;8292;8293;8294	8285					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	831.4038574099541	2	830.899325	1659.7841	2.2411	0.0018622	1.7183	0.0014277	3.9594	0.0032899	830.9005663464643	47.163	0.90421	49.139	48.87	49.774	1.976					86	28	4	0	0	0	1.0405	6	19696	19696;19743;19794;19833;19877;19932		0	0	1	10110000			6579	6359	3261	3281	8295;8296;8297;8298;8299;8300	8295					-0.0194029187725846
FWHRREMWRQE	11	Unmodified	_FWHRREMWRQE_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	830.899325	1659.7841	1.7559	0.001459	2.0142	0.0016736	3.77	0.0031325	830.9011032407074	48.663	4.5857	48.993	48.289	52.874	0.33034	-0.10407	0.00060419	NaN	0	367	148	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16810000			6580	6359	3261	3281							-0.0194029187725846
FWIELRSF	8	Unmodified	_FWIELRSF_					0	0	0			REV__ENSG00000146433|ENST00000684151|TMEM181	REV__ENSG00000146433|ENST00000684151|TMEM181	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.5294067263603	3	366.530798	1096.57057	-0.22645	-8.2999E-05	-2.4267	-0.00088946	-2.6531	-0.00097246	366.52987983819673	29.959	0.49133	31.241	31.072	31.564	1.2825					34	15	3	0	0	0	0.87935	1	12627	12627		6.7232	1.8262	1	6296600	+		6581	10304	3262	3282	8301	8301					0.026143506855078158
FWLAKRRHHC	10	Unmodified	_FWLAKRRHHC_					0	0	0		nc|ENSG00000108389|Q9NYA4|MTMR4;ENSG00000108389|ENST00000682306|MTMR4	nc|ENSG00000108389|Q9NYA4|MTMR4	nc|ENSG00000108389|Q9NYA4|MTMR4	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9084045290947	3	451.908497	1352.70366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4246	1	10.169	9.6692	10.669	0.74462								0	0	0	0.66264	1	3922	3922		0	0	1				6582	1632	3263	3283	8302	8302					0.04141891590393243
FWLMELTA	8	Unmodified	_FWLMELTA_					0	0	0		nc|ENSG00000124256|Q9H171-5|ZBP1;ENST00000480037.1_1_20:56191111-56195351:-|nuORF;ENST00000461547.5_1_20:56191111-56191654:-|nuORF	nc|ENSG00000124256|Q9H171-5|ZBP1	nc|ENSG00000124256|Q9H171-5|ZBP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.2189819216728	3	337.505373	1009.49429	3.9473	0.0013322	2.5339	0.00085521	6.4812	0.0021875	337.50695203511503	89.534	0.34412	90.554	90.364	90.708	1.0199					17	9	3	0	0	0	2.3239	1	37658	37658		1.6526	1.3836	1	530020			6583	6672	3264	3284	8303	8303					-0.010077892061417515
FWSEWHAQSG	10	Unmodified	_FWSEWHAQSG_					0	0	0			REV__ENST00000314289.12_2_4:2515602-2515950:+|nuORF	REV__ENST00000314289.12_2_4:2515602-2515950:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.1795226931572	3	412.180717	1233.52032	-0.0036954	-1.5232E-06	-0.65774	-0.00027111	-0.66144	-0.00027263	412.5146071089865	11.338	0.15653	12.1	12.037	12.193	0.76165					5	4	2	0	0	0	0.88031	1	4711	4711		3.5871	0.74377	1	505120	+		6584	12380	3265	3285	8304	8304					-0.08709803710303277
FWTKLIVL	8	Unmodified	_FWTKLIVL_					0	0	0			REV__ENST00000370794.7_1_1:78178924-78180349:-|nuORF	REV__ENST00000370794.7_1_1:78178924-78180349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.3203307986259	2	510.318046	1018.62154	1.665	0.00084968	0.72251	0.00036871	2.3875	0.0012184	510.3189210802707	58.328	0.28858	60.297	60.084	60.373	1.969					14	8	2	0	0	0	0.67986	1	24475	24475		32.305	4.1323	1	1442600	+		6585	12664	3266	3286	8305	8305					0.11297299730358645
FYADHPFIFL	10	Unmodified	_FYADHPFIFL_					0	0	0		ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	635.8208495974541	2	635.318774	1268.623	0.7674	0.00048754	1.3294	0.0008446	2.0968	0.0013321	635.8211413196269	79.993	0.24931	81.71	81.568	81.817	1.7167					11	7	2	0	0	0	0.32206	1	33562	33562		37.974	23.392	1	623830			6586	3235	3267	3287	8306	8306					-0.0005711097155653988
FYADHPFIFL	10	Unmodified	_FYADHPFIFL_					0	0	0		ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	635.318774	1268.623	2.2468	0.0014274	-1.7921	-0.0011385	0.4547	0.00028888	635.8193220335304	80.523	0.17822	81.774	81.64	81.818	1.2512	0.031851	-0.0014047	NaN	37.974	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1278400			6587	3235	3267	3287							-0.0005711097155653988
FYAPELLYY	9	Unmodified	_FYAPELLYY_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.7943603396416	2	589.792058	1177.56956	2.1878	0.0012904	-0.82443	-0.00048625	1.3634	0.00080411	589.7918175520377	81.334	0.30296	81.334	81.195	81.498	0					15	9	2	0	0	0	0.22519	2	33881	33881;33930		30.225	17.693	1	1202600		+	6588	341	3268	3288	8307;8308	8307					-0.012119084740561448
FYAPELLYY	9	Unmodified	_FYAPELLYY_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	589.792058	1177.56956	1.8721	0.0011041	0.99339	0.00058589	2.8655	0.00169	589.7934343673053	80.927	0.24917	81.218	81.058	81.307	0.29055	-0.057837	0.0018791	NaN	30.225	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	203670		+	6589	341	3268	3288							-0.012119084740561448
FYATNLSR	8	Unmodified	_FYATNLSR_					0	0	0		ENST00000482957.1_1_20:62065100-62065586:-|nuORF;nc|ENSG00000075043|O43526-6|KCNQ2;KCNQ2|p.S522Hfs*9|1|0.15|ENSG00000075043|chr20:63414155-63414156|-/GGGTG|frameshift_variant;nc|ENSG00000075043|O43526-4|KCNQ2;nc|ENSG00000075043|O43526-5|KCNQ2;nc|ENSG00000075043|O43526-3|KCNQ2;nc|ENSG00000075043|O43526-2|KCNQ2;ENSG00000075043|ENST00000359125|KCNQ2	ENST00000482957.1_1_20:62065100-62065586:-|nuORF	ENST00000482957.1_1_20:62065100-62065586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2536804080009	2	486.250892	970.48723	2.4559	0.0011942	2.9637	0.0014411	5.4197	0.0026353	486.2523380604906	51.907	0.8649	52.233	51.975	52.84	0.32553					54	27	3	0	0	0	0.73597	2	21792	21792;21844		26.884	3.7352	1	8247300			6590	923	3269	3289	8309;8310	8309					0.0008061423767458109
FYCNNTDENQ	10	Unmodified	_FYCNNTDENQ_					0	0	0			REV__ENST00000494857.5_3_8:17412137-17415822:+|nuORF	REV__ENST00000494857.5_3_8:17412137-17415822:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2370483279228	2	624.23531	1246.45607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.4	1	53.375	52.875	53.875	1.9753								0	0	0	0.66166	1	21541	21541		1.6526	0.85899	1		+		6591	13455	3270	3290	8311	8311					-0.15730371649419794
FYDLKKPPA	9	Unmodified	_FYDLKKPPA_					0	0	0		ENSG00000203697|ENST00000366872|CAPN8	ENSG00000203697|ENST00000366872|CAPN8	ENSG00000203697|ENST00000366872|CAPN8	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2017394900322	3	360.20257	1077.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.266	1	77.582	77.082	78.082	0.31653								0	0	0	0.42693	1	32312	32312		1.1933	0.12188	1				6592	5112	3271	3291	8312	8312					0.05019217482708882
FYDLPQGNGFC	11	Unmodified	_FYDLPQGNGFC_					0	0	0		nc|ENSG00000101665|O15105-2|SMAD7;ENST00000545051.2_1_18:46447744-46469079:-|nuORF;nc|ENSG00000101665|O15105-3|SMAD7;ENSG00000101665|ENST00000262158|SMAD7	nc|ENSG00000101665|O15105-2|SMAD7	nc|ENSG00000101665|O15105-2|SMAD7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.8499023318291	3	420.849979	1259.52811	-0.45575	-0.0001918	-1.5694	-0.00066047	-2.0251	-0.00085227	420.8493888165326	12.435	0.64898	12.435	12.22	12.869	0					31	20	2	0	0	0	0.77014	1	5202	5202		16.275	2.7559	1	4981800			6593	1363	3272	3292	8313	8313					-0.09127412505017674
FYELELNIQGH	11	Unmodified	_FYELELNIQGH_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	454.2856017947197	3	454.894465	1361.66157	2.9423	0.0013384	-1.0592	-0.00048182	1.8831	0.00085663	455.2275664841064	83.417	0.46432	83.688	83.461	83.925	0.27029					20	14	2	0	0	0	0.14606	1	34819	34819		1.3296	0.55311	1	415410			6594	1142	3273	3293	8314	8314					-0.004798501276809475
FYFDESFFHF	10	Unmodified	_FYFDESFFHF_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.2979614138603	2	693.295496	1384.57644	4.4498	0.003085	0.79167	0.00054886	5.2415	0.0036339	693.2955136310144	89.91	0.253	90.93	90.769	91.022	1.0199					11	7	2	0	0	0	0.28892	1	37901	37901		39.957	18.42	1	1100800			6595	1952	3274	3294	8315	8315					-0.10046595593485108
FYFDESFFHF	10	Unmodified	_FYFDESFFHF_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	693.2968627810478	2	693.295496	1384.57644	3.8764	0.0026875	-2.3121	-0.001603	1.5642	0.0010845	693.2937612770893	89.424	0.25105	90.828	90.735	90.986	1.4045					14	7	3	0	0	0	0.41677	1	37693	37693		32.305	24.15	1	784270			6596	1952	3274	3294	8316	8316					-0.10046595593485108
FYFLLCVLR	9	Unmodified	_FYFLLCVLR_					0	0	0		ENST00000545135.5_1_12:124429208-124429382:-|nuORF	ENST00000545135.5_1_12:124429208-124429382:-|nuORF	ENST00000545135.5_1_12:124429208-124429382:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3276244997978	2	587.328088	1172.64162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.11	1	46.11	45.61	46.61	0								0	0	0	0.42693	1	19284	19284		4.3292	0.73274	1				6597	7234	3275	3295	8317	8317					0.06220727398681447
FYFNTPNHC	9	Unmodified	_FYFNTPNHC_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.4952880740166	3	381.495648	1141.46511	2.0198	0.00077053	-2.4174	-0.00092222	-0.39761	-0.00015169	381.49457376316235	70.091	0.50034	71.445	71.147	71.648	1.3536					34	15	3	0	0	0	0.77876	1	29364	29364		4.1895	1.1943	1	2085900	+		6598	10219	3276	3296	8318	8318					-0.09995933502409571
FYFYFIFI	8	Unmodified	_FYFYFIFI_					0	0	0			REV__L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|89|2|anti-sense	REV__L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|89|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.2016174197197	3	387.200278	1158.57901	1.6531	0.0006401	1.614	0.00062494	3.2671	0.001265	387.20064581598666	41.001	0.91899	42.326	42.054	42.973	1.3254					49	28	3	0	0	0	0.76629	1	17171	17171		18.135	4.5201	1	2843400	+		6599	14251	3277	3297	8319	8319					0.006059046021391623
FYGITVGLI	9	Unmodified	_FYGITVGLI_					0	0	0			REV__tr|A0A7D7ABT9|A0A7D7ABT9_9CLOTComEC/Rec2familycompetenceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16570PE=4SV=1	REV__tr|A0A7D7ABT9|A0A7D7ABT9_9CLOTComEC/Rec2familycompetenceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16570PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5638305544853	1	982.560795	981.553519	4.8478	0.0047632	2.4	0.0023582	7.2478	0.0071214	982.5651287783325	90.825	0.48049	91.807	91.493	91.974	0.98156					17	14	2	0	0	0	0.20838	1	38292	38292		32.117	5.7757	1	1126300	+		6600	15899	3278	3298	8320	8320					0.06200430079729813
FYGITVGLI	9	Unmodified	_FYGITVGLI_					0	0	0			REV__tr|A0A7D7ABT9|A0A7D7ABT9_9CLOTComEC/Rec2familycompetenceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16570PE=4SV=1	REV__tr|A0A7D7ABT9|A0A7D7ABT9_9CLOTComEC/Rec2familycompetenceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16570PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	982.560795	981.553519	4.8478	0.0047632	2.4	0.0023582	7.2478	0.0071214	982.5651287783325	90.825	0.48049	91.807	91.493	91.974	0.98156	0	0	NaN	32.117	17	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1126300	+		6601	15899	3278	3298							0.06200430079729813
FYGPQVNNI	9	Unmodified	_FYGPQVNNI_					0	0	0		ENSG00000106299|ENST00000223023|WASL	ENSG00000106299|ENST00000223023|WASL	ENSG00000106299|ENST00000223023|WASL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2652465701103	2	526.263999	1050.51345	2.2684	0.0011938	0.62054	0.00032657	2.8889	0.0015203	526.2644781140064	44.322	0.37989	46.272	46.09	46.469	1.9492					20	11	2	0	0	0	0.66839	2	18582	18582;18635		8.5933	3.3626	1	557680			6602	1563	3279	3299	8321;8322	8321					-0.0097911659086094
FYGWSALK	8	Unmodified	_FYGWSALK_					0	0	0			REV__ENST00000521621.5_1_5:178047568-178050263:-|nuORF	REV__ENST00000521621.5_1_5:178047568-178050263:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2542602419853	2	486.252903	970.491253	1.9114	0.00092943	-0.55461	-0.00026968	1.3568	0.00065975	486.2528924712799	50.607	0.48606	52	51.801	52.287	1.3938					28	15	3	0	0	0	0.84871	1	21152	21152		16.942	0	1	4794400	+		6603	13632	3280	3300	8323	8323					0.004827037313702931
FYHEAVVLF	9	Unmodified	_FYHEAVVLF_					0	0	0		ENST00000464241.5_1_2:74710222-74719357:+|nuORF;ENSG00000115282|ENST00000233623|TTC31;ENST00000487623.1_1_2:74718721-74719901:+|nuORF	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.7935058474541	2	562.792392	1123.57023	2.535	0.0014267	-1.1144	-0.00062717	1.4206	0.00079953	562.7916286584417	59.614	0.59062	61.034	60.708	61.298	1.4196					50	18	4	0	0	0	0.12174	2	24980	24980;25030		42.095	15.826	1	6652300			6604	1910	3281	3301	8324;8325	8324					0.013389309656531623
FYHEAVVLF	9	Unmodified	_FYHEAVVLF_					0	0	0		ENST00000464241.5_1_2:74710222-74719357:+|nuORF;ENSG00000115282|ENST00000233623|TTC31;ENST00000487623.1_1_2:74718721-74719901:+|nuORF	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.7947875857353	2	562.792392	1123.57023	2.5234	0.0014202	0.24026	0.00013522	2.7637	0.0015554	562.7924145940251	59.109	0.50336	61.078	60.753	61.256	1.969					42	15	4	0	0	0	0.12174	2	24781	24781;24836		42.095	16.695	1	6519700			6605	1910	3281	3301	8326;8327	8326					0.013389309656531623
FYHKYFNYL	9	Unmodified	_FYHKYFNYL_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	647.8175536990166	2	647.816399	1293.61824	1.9009	0.0012314	0.26729	0.00017316	2.1682	0.0014046	647.815935054236	41.453	0.35318	42.778	42.587	42.94	1.3254					19	10	2	0	0	0	0.1735	1	17384	17384		36.044	28.134	1	775130			6606	3284	3282	3302	8328	8328					-0.016819951142906575
FYHKYFNYL	9	Unmodified	_FYHKYFNYL_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.2146179080009	3	432.213358	1293.61824	2.0737	0.00089628	1.0288	0.00044466	3.1025	0.0013409	432.2137862056474	40.987	0.65215	42.88	42.673	43.325	1.8927					31	20	2	0	0	0	0.11478	1	17169	17169		39.95	21.577	1	4410200			6607	3284	3282	3302	8329	8329					-0.016819951142906575
FYHKYFNYL	9	Unmodified	_FYHKYFNYL_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000528159.1_1_11:44228449-44265767:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	647.8187744021416	2	647.816399	1293.61824	1.9974	0.001294	0.57855	0.0003748	2.576	0.0016688	647.8167528100977	41	0.3828	42.893	42.705	43.088	1.8927					25	11	3	0	0	0	0.12174	1	17203	17203		42.095	31.271	1	816140			6608	3284	3282	3302	8330	8330					-0.016819951142906575
FYINGQYQF	9	Unmodified	_FYINGQYQF_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.2769042849541	2	590.277106	1178.53966	3.1339	0.0018498	-1.0799	-0.00063746	2.0539	0.0012124	590.2763233955303	60.509	0.34013	61.929	61.748	62.089	1.4196					24	10	3	0	0	0	0.069258	2	25420	25369;25420		60.39	26.287	1	2503300			6609	973	3283	3303	8331;8332	8332					-0.042468474193810835
FYINGQYQF	9	Unmodified	_FYINGQYQF_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.2789794802666	2	590.277106	1178.53966	3.1357	0.0018509	-0.38538	-0.00022748	2.7503	0.0016235	590.2766287733742	60.06	0.28401	62.026	61.883	62.167	1.9653					22	8	3	0	0	0	0.051699	1	25200	25200		67.344	12.57	1	2981200			6610	973	3283	3303	8333	8333					-0.042468474193810835
FYINTGTLQF	10	Unmodified	_FYINTGTLQF_					0	0	0		nc|ENSG00000157741|Q6ZU65-2|UBN2;ENSG00000157741|ENST00000473989|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.3066284060478	2	602.305864	1202.59717	2.5928	0.0015617	0.067093	4.0411E-05	2.6599	0.0016021	602.3051726475381	76.721	0.40576	78.014	77.762	78.168	1.2938					31	12	3	0	0	0	0.24174	1	32196	32196		43.858	26.745	1	2141900			6611	3479	3284	3304	8334	8334					0.0039799478618078865
FYINTGTLQF	10	Unmodified	_FYINTGTLQF_					0	0	0		nc|ENSG00000157741|Q6ZU65-2|UBN2;ENSG00000157741|ENST00000473989|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.3050414919853	2	602.305864	1202.59717	2.8027	0.0016881	-1.5995	-0.00096337	1.2032	0.00072469	602.3051118706298	76.23	0.43946	77.997	77.72	78.159	1.7672					25	13	3	0	0	0	0.19223	1	31961	31961		49.933	13.806	1	1599400			6612	3479	3284	3304	8335	8335					0.0039799478618078865
FYIRNKVY	8	Unmodified	_FYIRNKVY_					0	0	0		tr|A0A553STR3|A0A553STR3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_05485PE=4SV=1	tr|A0A553STR3|A0A553STR3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_05485PE=4SV=1	tr|A0A553STR3|A0A553STR3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_05485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2070800662041	3	368.206315	1101.59712	1.5924	0.00058632	0.077929	2.8694E-05	1.6703	0.00061501	368.2063444386939	40.078	0.43528	41.94	41.707	42.143	1.8624					40	13	4	0	0	0	0.87065	1	16782	16782		14.838	1.2234	1	6512800			6613	16665	3285	3305	8336	8336					0.05038039576857045
FYISNSIYI	9	Unmodified	_FYISNSIYI_					0	0	0			REV__nc|ENSG00000169551|Q8WUE5-2|CT55	REV__nc|ENSG00000169551|Q8WUE5-2|CT55	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.8324462771416	2	560.289682	1118.56481	3.2632	0.0018283	4.0917	0.0022926	7.3549	0.0041209	560.2911571856397	60.88	0.31998	62.3	62.121	62.441	1.4196					25	9	4	0	0	0	0.11071	1	25460	25460		15.847	3.3156	1	3270800	+		6614	10952	3286	3306	8337	8337					0.010272073831629314
FYISPVNKL	9	Unmodified	_FYISPVNKL_					0	0	0		nc|ENSG00000105778|Q8NBF6-2|AVL9;ENSG00000105778|ENST00000318709|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.8112670779228	2	540.808042	1079.60153	1.8656	0.0010089	1.2471	0.00067443	3.1126	0.0016833	540.8086177178201	48.143	0.34794	49.531	49.333	49.681	1.388					33	10	4	0	0	0	0.023786	3	20110	20110;20157;20203		96.285	52.426	1	6527500			6615	1542	3287	3307	8338;8339;8340	8338					0.06491503999745873
FYISPVNKL	9	Unmodified	_FYISPVNKL_					0	0	0		nc|ENSG00000105778|Q8NBF6-2|AVL9;ENSG00000105778|ENST00000318709|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	nc|ENSG00000105778|Q8NBF6-2|AVL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.8096801638603	2	540.808042	1079.60153	2.6056	0.0014091	0.72536	0.00039228	3.3309	0.0018014	540.8084110231313	47.63	0.36923	49.606	49.405	49.774	1.976					34	11	4	0	0	0	0.023786	2	19954	19904;19954		96.285	45.315	1	5906900			6616	1542	3287	3307	8341;8342	8342					0.06491503999745873
FYKCKEYRRIF	11	Unmodified	_FYKCKEYRRIF_					0	0	0		ZNF529|p.T262I|1|0.16|ENSG00000186020|chr19:36547773-36547773|G/A|missense_variant	ZNF529|p.T262I|1|0.16|ENSG00000186020|chr19:36547773-36547773|G/A|missense_variant	ZNF529|p.T262I|1|0.16|ENSG00000186020|chr19:36547773-36547773|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1343871951103	5	311.367684	1551.80204	-1.9725	-0.00061418	1.0966	0.00034146	-0.87588	-0.00027272	311.368576714066	49.266	0.78535	49.266	48.938	49.723	0					32	24	2	0	0	0	0.14606	1	20721	20721		0.094841	0.094841	1	741740			6617	17368	3288	3308	8343	8343					0.04821030324887943
FYKLIKRW	8	Unmodified	_FYKLIKRW_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1537963747978	3	385.234205	1152.68079	1.7655	0.00068013	-1.0699	-0.00041216	0.69558	0.00026796	385.2339544917644	43.247	0.29792	45.19	45.041	45.339	1.9438					14	9	2	0	0	0	2.3239	1	18102	18102		0.40072	0.30587	1	953960	+		6618	10483	3289	3309	8344	8344					0.11055195744552293
FYKWVAAS	8	Unmodified	_FYKWVAAS_					0	0	0		tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2545043826103	2	486.252903	970.491253	1.959	0.00095257	-0.19996	-9.7233E-05	1.759	0.00085533	486.25276463644144	52.494	0.90908	52.494	52.224	53.133	0					89	28	4	0	0	0	0.83518	2	21831	21831;21945		18.135	0	1	27604000			6619	16652	3290	3310	8345;8346	8345					0.004827037313702931
FYLDQVALSW	10	Unmodified	_FYLDQVALSW_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3179809451103	2	621.313689	1240.61282	4.2783	0.0026582	-0.66025	-0.00041022	3.618	0.0022479	621.3147636117843	89.149	0.2202	90.554	90.425	90.645	1.4045					11	6	2	0	0	0	0.49886	1	37578	37578		27.629	15.388	1	1151000			6620	2985	3291	3311	8347	8347					0.002142813032378399
FYLDQVALSW	10	Unmodified	_FYLDQVALSW_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	621.313689	1240.61282	4.8783	0.0030309	0.43773	0.00027197	5.316	0.0033029	621.3127334947433	89.535	0.27956	90.555	90.397	90.676	1.0199	0.00057867	0.00055548	NaN	27.629	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1338900			6621	2985	3291	3311							0.002142813032378399
FYLEGGFSKF	10	Unmodified	_FYLEGGFSKF_					0	0	0		ENSG00000139318|ENST00000279488|DUSP6	ENSG00000139318|ENST00000279488|DUSP6	ENSG00000139318|ENST00000279488|DUSP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7963134646416	2	597.795132	1193.57571	2.7389	0.0016373	-1.8257	-0.0010914	0.91317	0.00054589	597.7936212195043	60.141	0.45048	61.561	61.421	61.871	1.4196					31	14	3	0	0	0	0.091617	1	25239	25239		65.474	23.634	1	2095700			6622	2872	3292	3312	8348	8348					-0.013333902425074484
FYLEGGFSKF	10	Unmodified	_FYLEGGFSKF_					0	0	0		ENSG00000139318|ENST00000279488|DUSP6	ENSG00000139318|ENST00000279488|DUSP6	ENSG00000139318|ENST00000279488|DUSP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.7961303591728	2	597.795132	1193.57571	2.9248	0.0017484	0.2268	0.00013558	3.1516	0.001884	597.79444256559	59.652	0.48441	61.621	61.466	61.95	1.969					32	15	4	0	0	0	0.16394	1	25017	25017		53.404	22.767	1	2352500			6623	2872	3292	3312	8349	8349					-0.013333902425074484
FYLKKLTLF	9	Unmodified	_FYLKKLTLF_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;nc|ENSG00000167608|Q7Z404-3|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2850829958916	3	391.574116	1171.70052	1.8812	0.00073661	-0.61569	-0.00024109	1.2655	0.00049552	391.57377120207576	59.754	0.33736	61.173	61.053	61.39	1.4196					13	10	2	0	0	0	0.11891	1	25095	25095		2.9952	1.151	1	1041600			6624	3979	3293	3313	8350	8350					0.12153526964652883
FYLKKLTLF	9	Unmodified	_FYLKKLTLF_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4;nc|ENSG00000167608|Q7Z404-3|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	391.574116	1171.70052	2.4354	0.00095362	-2.5552	-0.0010005	-0.11979	-4.6907E-05	391.5725460216285	59.24	0.24683	61.209	61.099	61.345	1.969	0.017967	-0.0018754	NaN	2.9952	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	809800			6625	3979	3293	3313							0.12153526964652883
FYLLGTPVLS	10	Unmodified	_FYLLGTPVLS_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3185302615166	2	555.3157	1108.61685	3.0905	0.0017162	2.5641	0.0014239	5.6546	0.0031401	555.3168952371849	103.75	0.85164	103.91	103.4	104.25	0.16055					87	40	5	0	0	0	0.81324	1	43777	43777		10.824	2.9138	1	96408000			6626	2145	3294	3314	8351	8351					0.06688370796950949
FYLLGTPVLS	10	Unmodified	_FYLLGTPVLS_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	555.3157	1108.61685	0.73538	0.00040837	5.2281	0.0029032	5.9635	0.0033116	555.318685713747	103.78	0.70172	103.78	103.41	104.11	0	-0.056223	0.0016351	NaN	10.824	63	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76224000			6627	2145	3294	3314							0.06688370796950949
FYLLISKTF	9	Unmodified	_FYLLISKTF_					0	0	0		nc|ENSG00000107949|Q9P287-3|BCCIP;nc|ENSG00000107949|Q9P287-4|BCCIP;ENSG00000107949|ENST00000278100|BCCIP;nc|ENSG00000107949|Q9P287-2|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3292114138603	2	566.326068	1130.63758	3.0939	0.0017521	1.2878	0.00072932	4.3817	0.0024815	566.3263051094599	70.633	0.4185	71.987	71.679	72.098	1.3536					30	12	4	0	0	0	0.1109	1	29638	29638		45.7	26.443	1	1919700			6628	7849	3295	3315	8352	8352					0.07748961176616831
FYLLISKTF	9	Unmodified	_FYLLISKTF_					0	0	0		nc|ENSG00000107949|Q9P287-3|BCCIP;nc|ENSG00000107949|Q9P287-4|BCCIP;ENSG00000107949|ENST00000278100|BCCIP;nc|ENSG00000107949|Q9P287-2|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	566.326068	1130.63758	2.3587	0.0013358	-0.68634	-0.00038869	1.6723	0.00094708	566.3251386950618	70.104	0.32004	71.942	71.784	72.104	1.8378	-0.022492	-0.0011396	NaN	45.7	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	873890			6629	7849	3295	3315							0.07748961176616831
FYLPHGLSI	9	Unmodified	_FYLPHGLSI_					0	0	0		nc|ENSG00000145730|P19021-6|PAM;nc|ENSG00000145730|P19021-4|PAM;nc|ENSG00000145730|P19021-3|PAM;ENSG00000145730|ENST00000438793|PAM;nc|ENSG00000145730|P19021-5|PAM;nc|ENSG00000145730|P19021-2|PAM	nc|ENSG00000145730|P19021-6|PAM	nc|ENSG00000145730|P19021-6|PAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7888671755791	2	523.78711	1045.55967	3.2352	0.0016945	-0.059609	-3.1223E-05	3.1756	0.0016633	523.7873263681979	64.565	0.30616	65.972	65.833	66.139	1.4071					21	9	3	0	0	0	0.028763	1	27082	27082		89.427	39.758	1	3975700			6630	7889	3296	3316	8353	8353					0.038709483112370435
FYLPHGLSI	9	Unmodified	_FYLPHGLSI_					0	0	0		nc|ENSG00000145730|P19021-6|PAM;nc|ENSG00000145730|P19021-4|PAM;nc|ENSG00000145730|P19021-3|PAM;ENSG00000145730|ENST00000438793|PAM;nc|ENSG00000145730|P19021-5|PAM;nc|ENSG00000145730|P19021-2|PAM	nc|ENSG00000145730|P19021-6|PAM	nc|ENSG00000145730|P19021-6|PAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7889892458916	2	523.78711	1045.55967	2.7939	0.0014634	-0.27241	-0.00014268	2.5215	0.0013207	523.787671415578	63.976	0.31217	65.904	65.795	66.108	1.928					16	9	2	0	0	0	0.03795	1	26862	26862		77.984	27.129	1	3026200			6631	7889	3296	3316	8354	8354					0.038709483112370435
FYLPSSPNL	9	Unmodified	_FYLPSSPNL_					0	0	0		SMG5|p.E431Rfs*10|1|0.11|ENSG00000198952|chr1:156266345-156266345|C/-|frameshift_variant;ENSG00000198952|ENST00000361813|SMG5	SMG5|p.E431Rfs*10|1|0.11|ENSG00000198952|chr1:156266345-156266345|C/-|frameshift_variant	SMG5|p.E431Rfs*10|1|0.11|ENSG00000198952|chr1:156266345-156266345|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.6848022341728	2	519.26875	1036.52295	2.2869	0.0011875	-3.3448	-0.0017368	-1.0579	-0.00054935	519.2665536036686	63.048	0.27689	64.992	64.845	65.121	1.9444					14	8	2	0	0	0	0.094078	1	26461	26461		12.532	4.6214	1	954500			6632	5109	3297	3317	8355	8355					0.006146516946500924
FYMDTSHLF	9	Unmodified	_FYMDTSHLF_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7587158083916	2	580.757692	1159.50083	2.85	0.0016552	0.22655	0.00013157	3.0766	0.0017867	580.7578650411846	62.825	0.39351	64.239	64.045	64.439	1.4134					37	12	4	0	0	0	0.09539	2	26331	26331;26381		50.855	6.448	1	5559400			6633	2014	3298	3318	8356;8357	8356					-0.072538960454267
FYMDTSHLF	9	Unmodified	_FYMDTSHLF_					0	0	0		nc|ENSG00000117523|Q9Y520-2|PRRC2C;nc|ENSG00000117523|Q9Y520-3|PRRC2C;nc|ENSG00000117523|Q9Y520-6|PRRC2C;nc|ENSG00000117523|Q9Y520-4|PRRC2C;nc|ENSG00000117523|Q9Y520-5|PRRC2C;nc|ENSG00000117523|Q9Y520|PRRC2C;ENSG00000117523|ENST00000647382|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.7587158083916	2	580.757692	1159.50083	3.0994	0.0018	-1.3746	-0.00079829	1.7248	0.0010017	580.7565464378084	62.259	0.38893	64.216	64.03	64.419	1.9571					31	12	3	0	0	0	0.069258	2	26147	26099;26147		60.39	39.936	1	4584200			6634	2014	3298	3318	8358;8359	8359					-0.072538960454267
FYMRRFRSQ	9	Unmodified	_FYMRRFRSQ_					0	0	0		nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.3	1	116.5	116	117	0.19572								0	0	0	0.42693	1	50334	50334		0.26902	0.1097	1				6635	5013	3299	3319	8360	8360					0.01190790225246019
FYNDDIFNF	9	Unmodified	_FYNDDIFNF_					0	0	0		nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56;ENSG00000105948|ENST00000464848|TTC26	nc|ENSG00000105948|A0AVF1-2|IFT56	nc|ENSG00000105948|A0AVF1-2|IFT56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7596313357353	2	597.758746	1193.50294	2.6478	0.0015827	-2.1214	-0.0012681	0.52636	0.00031464	597.7576912949241	80.367	0.28065	81.619	81.417	81.698	1.2512					15	8	2	0	0	0	0.049839	1	33718	33718		68.081	46.334	1	1789000			6636	1548	3300	3320	8361	8361					-0.08607144035954661
FYNDDIFNF	9	Unmodified	_FYNDDIFNF_					0	0	0		nc|ENSG00000105948|A0AVF1-2|IFT56;nc|ENSG00000105948|A0AVF1-3|IFT56;ENSG00000105948|ENST00000464848|TTC26	nc|ENSG00000105948|A0AVF1-2|IFT56	nc|ENSG00000105948|A0AVF1-2|IFT56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.7601196169853	2	597.758746	1193.50294	1.3379	0.00079974	0.48292	0.00028867	1.8208	0.0010884	597.7595721367886	79.939	0.3143	81.656	81.443	81.758	1.7167					26	9	4	0	0	0	0.091139	1	33503	33503		52.268	37.43	1	2560800			6637	1548	3300	3320	8362	8362					-0.08607144035954661
FYNLLTRTF	9	Unmodified	_FYNLLTRTF_					0	0	0		nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8181640505791	2	587.816399	1173.61824	2.6904	0.0015815	2.2068	0.0012972	4.8972	0.0028786	587.8179772390872	63.261	0.83875	64.675	64.407	65.246	1.4134					59	26	3	0	0	0	0.00013275	4	26560	26483;26521;26560;26608		145.13	99.109	1	13148000			6638	2210	3301	3321	8363;8364;8365;8366	8365					0.038380048857106885
FYNLLTRTF	9	Unmodified	_FYNLLTRTF_					0	0	0		nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8182861208916	2	587.816399	1173.61824	2.6264	0.0015438	1.6904	0.00099366	4.3168	0.0025375	587.8177334216466	62.668	0.77671	64.612	64.375	65.152	1.9444					47	24	3	0	0	0	2.1949E-05	3	26311	26263;26311;26355		171.09	125.07	1	15755000			6639	2210	3301	3321	8367;8368;8369	8368					0.038380048857106885
FYNSFLEQL	9	Unmodified	_FYNSFLEQL_					0	0	0		ENSG00000125821|ENST00000377452|DTD1;ENST00000494921.1_1_20:18568716-18611186:+|nuORF	ENSG00000125821|ENST00000377452|DTD1	ENSG00000125821|ENST00000377452|DTD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7840453982353	2	580.784764	1159.55498	2.4612	0.0014294	-0.50373	-0.00029256	1.9575	0.0011369	580.7843127347111	78.115	0.44995	79.396	79.259	79.709	1.2809					26	14	3	0	0	0	0.20671	1	32783	32783		32.305	4.6767	1	2192800			6640	2280	3302	3322	8370	8370					-0.018419806222027546
FYNSFLEQL	9	Unmodified	_FYNSFLEQL_					0	0	0		ENSG00000125821|ENST00000377452|DTD1;ENST00000494921.1_1_20:18568716-18611186:+|nuORF	ENSG00000125821|ENST00000377452|DTD1	ENSG00000125821|ENST00000377452|DTD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.7846557497978	2	580.784764	1159.55498	1.2842	0.00074587	0.50752	0.00029476	1.7918	0.0010406	580.7844243661572	77.623	0.32841	79.374	79.261	79.59	1.7514					22	10	3	0	0	0	0.13873	1	32546	32546		39.957	21.811	1	2603000			6641	2280	3302	3322	8371	8371					-0.018419806222027546
FYPAIADLF	9	Unmodified	_FYPAIADLF_					0	0	0		ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7759277224541	2	528.773668	1055.53278	4.1948	0.0022181	0.61132	0.00032325	4.8061	0.0025413	528.7739960414697	94.196	0.59262	94.937	94.637	95.229	0.74124					51	18	4	0	0	0	0.070759	2	39614	39564;39614		59.795	27.678	1	7812900			6642	2973	3303	3323	8372;8373	8373					0.00723839700026474
FYPAIADLF	9	Unmodified	_FYPAIADLF_					0	0	0		ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7742187380791	2	528.773668	1055.53278	3.4126	0.0018045	0.017099	9.0417E-06	3.4297	0.0018135	528.7735788389176	93.693	0.65364	94.97	94.704	95.358	1.277					57	20	4	0	0	0	0.11911	1	39376	39376		42.968	19.82	1	7131900			6643	2973	3303	3323	8374	8374					0.00723839700026474
FYPAIADLF	9	Unmodified	_FYPAIADLF_					0	0	0		ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1056.545703113079	1	1056.54006	1055.53278	4.0401	0.0042685	-2.4218	-0.0025587	1.6183	0.0017098	1056.5391702467982	93.771	0.43198	95.048	94.767	95.199	1.277					27	13	3	0	0	0	0.052478	2	39457	39395;39457		67.035	31.142	1	2415800			6644	2973	3303	3323	8375;8376	8376					0.00723839700026474
FYPPHPDYTW	10	Unmodified	_FYPPHPDYTW_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.7958862185478	2	661.795663	1321.57677	2.2908	0.0015161	-1.1264	-0.00074544	1.1644	0.00077062	661.7949095265633	49.918	0.53874	51.309	51.042	51.58	1.3911					26	16	2	0	0	0	0.28892	2	20894	20894;20946		39.957	31.212	1	906030			6645	2426	3304	3324	8377;8378	8377					-0.07115175873650514
FYPPHPDYTW	10	Unmodified	_FYPPHPDYTW_					0	0	0		ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	ENSG00000130309|ENST00000252599|COLGALT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	661.7944213747978	2	661.795663	1321.57677	1.5882	0.001051	-0.76987	-0.00050949	0.81831	0.00054155	661.7957658963797	49.31	0.62321	51.287	50.978	51.601	1.9772					33	19	3	0	0	0	0.32206	2	20668	20668;20739		37.974	24.068	1	996730			6646	2426	3304	3324	8379;8380	8379					-0.07115175873650514
FYPPKVELF	9	Unmodified	_FYPPKVELF_					0	0	0		ENSG00000128050|ENST00000512576|PAICS;nc|ENSG00000128050|P22234-2|PAICS	ENSG00000128050|ENST00000512576|PAICS	ENSG00000128050|ENST00000512576|PAICS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3117553591728	2	570.310418	1138.60628	2.9615	0.001689	0.25367	0.00014467	3.2151	0.0018336	570.3102437068173	63.07	1.0725	64.483	63.743	64.816	1.4134					99	34	5	0	0	0	0.1388	4	26456	26379;26417;26456;26495		39.95	18.203	1	21081000			6647	2356	3305	3325	8381;8382;8383;8384	8383					0.0425238814250406
FYPPKVELF	9	Unmodified	_FYPPKVELF_					0	0	0		ENSG00000128050|ENST00000512576|PAICS;nc|ENSG00000128050|P22234-2|PAICS	ENSG00000128050|ENST00000512576|PAICS	ENSG00000128050|ENST00000512576|PAICS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3116332888603	2	570.310418	1138.60628	2.978	0.0016984	0.34198	0.00019503	3.3199	0.0018934	570.3102236482817	62.446	1.2976	64.403	63.497	64.795	1.9571					101	41	4	0	0	0	0.1109	3	26258	26181;26219;26258		45.7	20.3	1	25242000			6648	2356	3305	3325	8385;8386;8387	8387					0.0425238814250406
FYPSIAALV	9	Unmodified	_FYPSIAALV_					0	0	0			REV__ENST00000469661.1_1_3:67048755-67053962:+|nuORF	REV__ENST00000469661.1_1_3:67048755-67053962:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.7753784060478	2	490.776211	979.537869	1.8358	0.00090096	-1.2633	-0.00062	0.57247	0.00028095	490.77527353279413	48.479	0.267	48.479	48.317	48.584	0					10	8	2	0	0	0	0.46905	1	20245	20245		16.942	0	1	458870	+		6649	10683	3306	3326	8388	8388					0.047281435626587154
FYPSIAALV	9	Unmodified	_FYPSIAALV_					0	0	0			REV__ENST00000469661.1_1_3:67048755-67053962:+|nuORF	REV__ENST00000469661.1_1_3:67048755-67053962:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	490.776211	979.537869	1.8358	0.00090096	-1.2633	-0.00062	0.57247	0.00028095	490.77527353279413	48.479	0.267	48.479	48.317	48.584	0	0	0	NaN	16.942	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458870	+		6650	10683	3306	3326							0.047281435626587154
FYQKYFGLPQ	10	Unmodified	_FYQKYFGLPQ_					0	0	0			REV__ENST00000471538.1_1_1:16200123-16200204:+|nuORF	REV__ENST00000471538.1_1_1:16200123-16200204:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.982	1	20.04	19.54	20.54	1.0585								0	0	0	0.66222	1	7910	7910		0.69767	0.23933	1		+		6651	13284	3307	3327	8389	8389					0.011222740571838585
FYQPDLKYLSF	11	Unmodified	_FYQPDLKYLSF_					0	0	0		nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4;ENSG00000160505|ENST00000301295|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.8627197146416	2	710.861003	1419.70745	2.5404	0.0018058	0.43898	0.00031205	2.9793	0.0021179	710.8610248180216	70.8	0.28183	72.153	72.002	72.284	1.3536					23	8	4	0	0	0	0.14486	2	29698	29698;29753		47.732	32.483	1	3781200			6652	3562	3308	3328	8390;8391	8390					0.01438795054559705
FYQPDLKYLSF	11	Unmodified	_FYQPDLKYLSF_					0	0	0		nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4;ENSG00000160505|ENST00000301295|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.8625976443291	2	710.861003	1419.70745	1.182	0.00084023	0.86604	0.00061564	2.048	0.0014559	710.861486685457	70.345	0.28069	72.183	72.01	72.291	1.8378					22	8	3	0	0	0	0.13365	1	29502	29502		49.742	30.38	1	3610400			6653	3562	3308	3328	8392	8392					0.01438795054559705
FYQPKIQQF	9	Unmodified	_FYQPKIQQF_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.8168212771416	2	599.816399	1197.61824	2.1578	0.0012943	0.25167	0.00015096	2.4095	0.0014453	599.8156832596101	41.742	0.75227	43.067	42.524	43.276	1.3254					52	23	4	0	0	0	0.00020592	2	17483	17483;17535		141.83	83.148	1	6488300			6654	2922	3309	3329	8393;8394	8393					0.027340048857013244
FYQPKIQQF	9	Unmodified	_FYQPKIQQF_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.8173095583916	2	599.816399	1197.61824	1.9795	0.0011873	-0.52751	-0.00031641	1.452	0.00087091	599.816066405419	41.301	0.49183	43.194	42.864	43.356	1.8927					29	15	2	0	0	0	0.00020592	2	17301	17301;17358		141.83	94.078	1	8931100			6655	2922	3309	3329	8395;8396	8395					0.027340048857013244
FYQRAAKP	8	Unmodified	_FYQRAAKP_					0	0	0		ENSG00000100749|ENST00000216639|VRK1;ENST00000555351.1_1_14:97263783-97319303:+|nuORF	ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1603576540947	3	327.51526	979.52395	-1.2586	-0.00041222	1.2189	0.00039922	-0.039693	-1.3E-05	327.51564071829586	13.885	0.15482	14.612	14.503	14.658	0.72639					7	4	2	0	0	0	2.3239	1	5747	5747		1.6526	0	1	1382000			6656	1301	3310	3330	8397	8397					0.03336910854227426
FYQRFPLSF	9	Unmodified	_FYQRFPLSF_					0	0	0		ENSG00000134109|ENST00000256497|EDEM1;ENST00000443790.1_1_3:5229490-5231099:+|nuORF	ENSG00000134109|ENST00000256497|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.3183471560478	2	602.811116	1203.60768	2.8854	0.0017393	4.372	0.0026355	7.2573	0.0043748	603.3158672981315	65.365	0.49768	66.764	66.443	66.941	1.3989					41	15	4	0	0	0	0.026734	2	27425	27375;27425		92.653	60.348	1	3263000			6657	2595	3311	3331	8398;8399	8399					0.014020222312637998
FYQRFPLSF	9	Unmodified	_FYQRFPLSF_					0	0	0		ENSG00000134109|ENST00000256497|EDEM1;ENST00000443790.1_1_3:5229490-5231099:+|nuORF	ENSG00000134109|ENST00000256497|EDEM1	ENSG00000134109|ENST00000256497|EDEM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.3185302615166	2	602.811116	1203.60768	1.9017	0.0011464	3.4715	0.0020926	5.3732	0.003239	603.3154946598402	64.897	0.40501	66.805	66.564	66.969	1.9085					37	12	4	0	0	0	0.063746	1	27251	27251		62.573	39.424	1	2062500			6658	2595	3311	3331	8400	8400					0.014020222312637998
FYRLRRCR	8	Unmodified	_FYRLRRCR_					0	0	0			REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	REV__ENST00000457997.1_1_13:19435671-19446003:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3260986208916	2	585.327276	1168.64	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.71	1	103.77	103.27	104.27	0.059502								0	0	0	1.0178	1	43570	43570		0.69038	0.088878	1		+		6659	13178	3312	3332	8401	8401					0.06242531153293385
FYRRIRKKFHR	11	Unmodified	_FYRRIRKKFHR_					0	0	0			REV__NPHP3|p.K35Nfs*114|1|0.33|ENSG00000113971|chr3:132722251-132722251|C/-|frameshift_variant	REV__NPHP3|p.K35Nfs*114|1|0.33|ENSG00000113971|chr3:132722251-132722251|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1806823611259	4	402.494293	1605.94807	0.32046	0.00012898	-3.3941	-0.0013661	-3.0737	-0.0012371	402.4930404807291	42.609	0.61548	42.609	42.353	42.968	0					43	19	3	0	0	0	0.14606	1	17774	17774		0	0	1	795450	+		6660	14585	3313	3333	8402	8402					0.16933093675788768
FYSDDSDDNYK	11	Unmodified	_FYSDDSDDNYK_					0	0	0			REV__nc|ENSG00000242247|Q9NP61-2|ARFGAP3	REV__nc|ENSG00000242247|Q9NP61-2|ARFGAP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8468810915947	3	456.845728	1367.51536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.008	1	17.008	16.508	17.508	0								0	0	0	0.63775	1	7059	7059		1.2148	0.51716	1		+		6661	11925	3314	3334	8403	8403					-0.15370197154243215
FYSIEFKQF	9	Unmodified	_FYSIEFKQF_					0	0	0		ENST00000354105.8_1_10:102020785-102021812:-|nuORF;ENST00000468709.5_1_10:102020754-102021812:-|nuORF	ENST00000354105.8_1_10:102020785-102021812:-|nuORF	ENST00000354105.8_1_10:102020785-102021812:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.8049804568291	2	604.802957	1207.59136	2.4722	0.0014952	-0.77137	-0.00046653	1.7008	0.0010287	604.802830529499	59.519	0.28403	60.939	60.831	61.115	1.4196					18	8	3	0	0	0	0.04145	1	24970	24970		74.929	54.475	1	948200			6662	5973	3315	3335	8404	8404					-0.004131037255092451
FYSIEFKQF	9	Unmodified	_FYSIEFKQF_					0	0	0		ENST00000354105.8_1_10:102020785-102021812:-|nuORF;ENST00000468709.5_1_10:102020754-102021812:-|nuORF	ENST00000354105.8_1_10:102020785-102021812:-|nuORF	ENST00000354105.8_1_10:102020785-102021812:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	604.8450195193291	2	604.802957	1207.59136	2.5564	0.0015461	-0.62742	-0.00037946	1.929	0.0011667	604.8020863306563	59.117	0.25341	61.086	60.94	61.193	1.969					20	7	4	0	0	0	0.022628	1	24818	24818		65.235	47.089	1	1131500			6663	5973	3315	3335	8405	8405					-0.004131037255092451
FYSLLEKP	8	Unmodified	_FYSLLEKP_					0	0	0		chr12:69750854-69755384|112|10.71|0.23|5.55|+|2|TE_info:L1MC5a,L1MC5a_dup12119,L1,LINE,donor,-,69750280,69750854|None,RAB3IP|10	chr12:69750854-69755384|112|10.71|0.23|5.55|+|2|TE_info:L1MC5a,L1MC5a_dup12119,L1,LINE,donor,-,69750280,69750854|None,RAB3IP|10	chr12:69750854-69755384|112|10.71|0.23|5.55|+|2|TE_info:L1MC5a,L1MC5a_dup12119,L1,LINE,donor,-,69750280,69750854|None,RAB3IP|10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7721130251884	2	498.773668	995.532783	1.0457	0.00052158	-4.0135	-0.0020019	-2.9678	-0.0014803	498.7711836528945	100.95	0.12611	100.95	100.87	101	0					7	3	3	0	0	0	0.89008	1	42273	42273		2.5775	0.73324	1	2241100			6664	194	3316	3336	8406	8406					0.03483839700038516
FYSLLSYFH	9	Unmodified	_FYSLLSYFH_					0	0	0		nc|ENSG00000187741|O15360-3|FANCA;ENSG00000187741|ENST00000389301|FANCA;ENST00000562424.1_1_16:89805011-89806109:-|nuORF	nc|ENSG00000187741|O15360-3|FANCA	nc|ENSG00000187741|O15360-3|FANCA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7900878787041	2	588.78985	1175.56515	1.8599	0.0010951	-2.1135	-0.0012444	-0.25362	-0.00014933	588.7888886807833	39.95	0.37271	41.812	41.615	41.987	1.8624					19	11	2	0	0	0	0.19075	1	16761	16761		34.102	2.8341	1	616160			6665	4835	3317	3337	8407	8407					-0.015613728969583462
FYSNYGEVIAL	11	Unmodified	_FYSNYGEVIAL_					0	0	0			REV__ENST00000471758.1_1_X:55026837-55029420:+|nuORF	REV__ENST00000471758.1_1_X:55026837-55029420:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3174316287041	2	638.316428	1274.6183	1.165	0.00074365	0.18419	0.00011757	1.3492	0.00086122	638.3164028101829	54.93	0.40675	56.335	56.121	56.528	1.4048					48	13	5	0	0	0	0.17708	1	22988	22988		41.956	3.3408	1	25832000	+		6666	10935	3318	3338	8408	8408					-0.008020399049428306
FYSRLLQKF	9	Unmodified	_FYSRLLQKF_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.3400756716728	2	601.340041	1200.66553	2.2934	0.0013791	-0.38514	-0.0002316	1.9082	0.0011475	601.3397141833622	41.331	0.44543	42.657	42.462	42.908	1.3254					39	13	4	0	0	0	0.045139	2	17317	17317;17369		71.708	37.605	1	5677800			6667	4330	3319	3339	8409;8410	8409					0.07322284156703063
FYSRLLQKF	9	Unmodified	_FYSRLLQKF_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.3405029177666	2	601.340041	1200.66553	2.0849	0.0012538	-0.26836	-0.00016137	1.8166	0.0010924	601.339111473905	40.925	0.47716	42.817	42.61	43.088	1.8927					35	14	4	0	0	0	0.11077	1	17131	17131		45.74	5.5007	1	4651800			6668	4330	3319	3339	8411	8411					0.07322284156703063
FYSRLLQKF	9	Unmodified	_FYSRLLQKF_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	401.2301513552666	3	401.229119	1200.66553	1.9049	0.00076429	0.61654	0.00024737	2.5214	0.0010117	401.22940881319266	40.955	0.47758	42.848	42.579	43.056	1.8927					45	14	4	0	0	0	0.10473	1	17156	17156		43.982	21.324	1	13624000			6669	4330	3319	3339	8412	8412					0.07322284156703063
FYSRLLQKF	9	Unmodified	_FYSRLLQKF_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	401.229119	1200.66553	1.8437	0.00073977	0.90483	0.00036305	2.7486	0.0011028	401.2295935135037	41.373	0.57426	42.699	42.399	42.973	1.3254	-0.07454	0.00016969	NaN	43.982	48	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12253000			6670	4330	3319	3339							0.07322284156703063
FYSTLANR	8	Unmodified	_FYSTLANR_					0	0	0		tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2534362673759	2	486.250892	970.48723	2.4559	0.0011942	2.9637	0.0014411	5.4197	0.0026353	486.2523380604906	51.907	0.8649	52.233	51.975	52.84	0.32553					54	27	3	0	0	0	0.7006	3	21742	21694;21742;21912		30.225	0	1	8247300			6671	16935	3320	3340	8413;8414;8415	8414					0.0008061423767458109
FYSTLANR	8	Unmodified	_FYSTLANR_					0	0	0		tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2542602419853	2	486.250892	970.48723	1.9114	0.00092943	3.5819	0.0017417	5.4933	0.0026711	486.2528924712799	50.607	0.48606	52	51.801	52.287	1.3938					28	15	3	0	0	0	0.77833	1	21201	21201		23.148	0	1	4794400			6672	16935	3320	3340	8416	8416					0.0008061423767458109
FYSTLANR	8	Unmodified	_FYSTLANR_					0	0	0		tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	tr|A0A7D6VTY0|A0A7D6VTY0_9CLOTAminoacidadenylationdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18690PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	486.250892	970.48723	1.5936	0.00077489	4.7685	0.0023187	6.3621	0.0030936	486.25324516233906	50.05	0.54999	52.027	51.788	52.338	1.9772	-0.1617	0.00095546	NaN	30.225	32	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3677600			6673	16935	3320	3340							0.0008061423767458109
FYTKVLHQK	9	Unmodified	_FYTKVLHQK_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	582.7794067263603	2	582.332216	1162.64988	2.6858	0.001564	4.3719	0.0025459	7.0577	0.0041099	582.334611878364	76.072	0.40617	77.839	77.627	78.033	1.7672					14	12	2	0	0	0	0.11645	1	31857	31857		8.5933	4.9968	1	437480	+		6674	8789	3321	3341	8417	8417					0.07505997639623274
FYTPDDRCMNK	11	Unmodified	_FYTPDDRCMNK_					0	0	0			REV__nc|ENSG00000283586|P0CG01|GKN3P	REV__nc|ENSG00000283586|P0CG01|GKN3P	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	464.1453124880791	3	463.869045	1388.58531	0.89241	0.00041396	0.80972	0.00037561	1.7021	0.00078957	463.8693334656216	15.204	0.25068	15.204	15.092	15.342	0					13	7	2	0	0	0	0.14606	1	6331	6331		1.3296	0	1	341630	+		6675	14565	3322	3342	8418	8418					-0.09344313290966966
FYTQLLQEL	9	Unmodified	_FYTQLLQEL_					0	0	0		SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant;nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540|SMG7;nc|ENSG00000116698|Q92540-5|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;ENSG00000116698|ENST00000688051|SMG7	SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant	SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8102905154228	2	577.808239	1153.60193	2.9634	0.0017123	1.3895	0.00080284	4.3528	0.0025151	577.808124336263	81.098	0.27811	82.331	82.161	82.439	1.2332					20	8	3	0	0	0	0.19075	1	34053	34053		34.102	3.8776	1	2214800			6676	1981	3323	3343	8419	8419					0.03126878928969745
FYTQLLQEL	9	Unmodified	_FYTQLLQEL_					0	0	0		SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant;nc|ENSG00000116698|Q92540-2|SMG7;nc|ENSG00000116698|Q92540|SMG7;nc|ENSG00000116698|Q92540-5|SMG7;nc|ENSG00000116698|Q92540-4|SMG7;ENSG00000116698|ENST00000688051|SMG7	SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant	SMG7|p.Q709Afs*129|1|0.03|ENSG00000116698|chr1:183545066-183545067|-/GCTACCCAGATGAAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8107177615166	2	577.808239	1153.60193	1.9766	0.0011421	1.4785	0.0008543	3.4551	0.0019964	577.8083652523821	80.641	0.33666	82.337	82.18	82.517	1.6959					14	10	2	0	0	0	0.27148	1	33858	33858		26.884	11.036	1	1085300			6677	1981	3323	3343	8420	8420					0.03126878928969745
FYTVIPHNF	9	Unmodified	_FYTVIPHNF_					0	0	0		EZR-PARP3|1|fusion;ENSG00000041880|ENST00000398755|PARP3;nc|ENSG00000041880|Q9Y6F1-2|PARP3	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2902099490166	2	569.290017	1136.56548	1.6156	0.00091975	-2.5288	-0.0014396	-0.91314	-0.00051984	569.2879543293311	54.883	0.37716	56.288	56.121	56.499	1.4048					29	12	3	0	0	0	0.10473	1	23026	23026		47.749	29.602	1	9012100			6678	7580	3324	3344	8421	8421					0.0026604682288962067
FYTVIPHNF	9	Unmodified	_FYTVIPHNF_					0	0	0		EZR-PARP3|1|fusion;ENSG00000041880|ENST00000398755|PARP3;nc|ENSG00000041880|Q9Y6F1-2|PARP3	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2905151247978	2	569.290017	1136.56548	2.0372	0.0011598	-2.5932	-0.0014763	-0.55602	-0.00031654	569.2877949051244	54.441	0.3331	56.409	56.223	56.556	1.9684					26	10	3	0	0	0	0.029061	1	22833	22833		88.954	52.91	1	9170300			6679	7580	3324	3344	8422	8422					0.0026604682288962067
FYVDHNPIL	9	Unmodified	_FYVDHNPIL_					0	0	0			REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2909423708916	2	559.287474	1116.5604	1.6365	0.00091526	1.7494	0.00097844	3.3859	0.0018937	559.2894870884014	49.827	0.2813	51.804	51.665	51.946	1.9772					15	8	2	0	0	0	0.44512	1	20854	20854		18.146	5.6148	1	1024300	+		6680	15214	3325	3345	8423	8423					0.0067774296028346726
FYVDSDMVNEF	11	Unmodified	_FYVDSDMVNEF_					0	0	0		nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	683.2897827029228	2	683.287011	1364.55947	2.1251	0.001452	1.8084	0.0012357	3.9335	0.0026877	683.2881380674322	69.653	0.3144	71.018	70.876	71.191	1.3657					23	9	3	0	0	0	0.1562	1	29260	29260		45.7	28.587	1	1854700			6681	1295	3326	3346	8424	8424					-0.1082288426159721
FYVDSDMVNEF	11	Unmodified	_FYVDSDMVNEF_					0	0	0		nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	683.3589965701103	2	683.287011	1364.55947	1.1986	0.00081899	2.8096	0.0019197	4.0082	0.0027387	683.2892046039991	69.241	0.37511	71.094	70.887	71.262	1.853					23	11	3	0	0	0	0.13426	1	29071	29071		36.127	22.221	1	1853000			6682	1295	3326	3346	8425	8425					-0.1082288426159721
FYVDTVRAF	9	Unmodified	_FYVDTVRAF_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2911254763603	2	559.287474	1116.5604	2.5633	0.0014336	2.7608	0.0015441	5.3242	0.0029777	559.2902935804484	50.391	0.24722	51.785	51.615	51.862	1.3938					13	7	2	0	0	0	0.20244	1	21090	21090		32.786	8.7651	1	1196200			6683	4433	3327	3347	8426	8426					0.0067774296028346726
FYVDTVRAF	9	Unmodified	_FYVDTVRAF_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	559.287474	1116.5604	1.6365	0.00091526	1.7494	0.00097844	3.3859	0.0018937	559.2894870884014	49.827	0.2813	51.804	51.665	51.946	1.9772	0.0093756	-0.00028163	NaN	32.786	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1024300			6684	4433	3327	3347							0.0067774296028346726
FYVGHIDAF	9	Unmodified	_FYVGHIDAF_					0	0	0		ENSG00000128915|ENST00000261520|ICE2;ENST00000558121.5_1_15:60715835-60734771:-|nuORF	ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7628051638603	2	534.761092	1067.50763	1.8435	0.00098583	0.87873	0.00046991	2.7222	0.0014557	534.7612373226891	54.315	0.41327	55.72	55.518	55.931	1.4048					25	12	3	0	0	0	0.03795	1	22744	22744		77.984	47.76	1	1950500			6685	2389	3328	3348	8427	8427					-0.023422151025442872
FYVIETREP	9	Unmodified	_FYVIETREP_					0	0	0		ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	ENSG00000164690|ENST00000297261|SHH	MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3024169802666	2	577.298039	1152.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.11	1	101.18	100.68	101.68	0.067009								0	0	0	0.42693	1	42331	42331		0.6015	0	1				6686	3792	3329	3349	8428	8428					0.011337082691625255
FYVKYVQIF	9	Unmodified	_FYVKYVQIF_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.8323852419853	2	603.831517	1205.64848	1.9047	0.0011501	-0.23203	-0.00014011	1.6727	0.00101	603.831612855574	67.658	0.48394	69.035	68.85	69.334	1.3778					38	15	3	0	0	0	0.033794	2	28409	28358;28409		81.613	39.658	1	9064300			6687	2525	3330	3350	8429;8430	8430					0.05388363550878239
FYVKYVQIF	9	Unmodified	_FYVKYVQIF_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.8330566287041	2	603.831517	1205.64848	1.2404	0.000749	0.41119	0.00024829	1.6516	0.00099729	603.8317583448186	67.145	0.52103	69.034	68.86	69.381	1.8889					33	16	3	0	0	0	0.076627	2	28183	28135;28183		57.471	25.197	1	10879000			6688	2525	3330	3350	8431;8432	8432					0.05388363550878239
FYVPAEPKLAF	11	Unmodified	_FYVPAEPKLAF_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENSG00000147604|ENST00000352983|RPL7	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.3478881716728	2	641.347532	1280.68051	1.5645	0.0010034	0.68673	0.00044043	2.2513	0.0014438	641.3475428360435	66.241	0.42572	67.63	67.448	67.874	1.3887					36	13	3	0	0	0	0.14563	2	27766	27766;27814		47.594	16.958	1	3775400			6689	6597	3331	3351	8433;8434	8433					0.05139731234021383
FYVPAEPKLAF	11	Unmodified	_FYVPAEPKLAF_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF;ENST00000461190.1_1_3:123871117-123871351:-|nuORF;ENSG00000147604|ENST00000352983|RPL7	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8489868044853	2	641.347532	1280.68051	1.5101	0.00096853	0.79152	0.00050764	2.3017	0.0014762	641.3478254352303	65.787	0.42247	67.695	67.559	67.982	1.9085					36	13	4	0	0	0	0.14563	2	27595	27595;27643		47.594	23.574	1	3333600			6690	6597	3331	3351	8435;8436	8435					0.05139731234021383
FYVRGLFSF	9	Unmodified	_FYVRGLFSF_					0	0	0		ENSG00000129933|ENST00000262815|MAU2;ENST00000262816.11_1_19:19456115-19463084:+|nuORF;nc|ENSG00000129933|Q9Y6X3-3|MAU2;ENST00000589947.7_1_19:19459550-19465349:+|nuORF;nc|ENSG00000129933|Q9Y6X3-2|MAU2;ENST00000587709.5_1_19:19459550-19466588:+|nuORF	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3002807497978	2	568.300384	1134.58622	2.5641	0.0014572	-1.6452	-0.00093497	0.91893	0.00052223	568.2994951835209	76.195	0.51311	77.488	77.311	77.825	1.2938					30	16	3	0	0	0	0.053939	1	31977	31977		66.457	32.354	1	1916900			6691	2412	3332	3352	8437	8437					0.024306372025876044
FYWNWKRTYR	10	Unmodified	_FYWNWKRTYR_					0	0	0			REV__ENST00000480456.5_1_21:27087017-27087155:+|nuORF	REV__ENST00000480456.5_1_21:27087017-27087155:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.5907165408134	3	507.257961	1518.75205	0.23612	0.00011977	-0.52155	-0.00026456	-0.28544	-0.00014479	507.25717314214955	13.97	0.0898	14.797	14.736	14.826	0.82788					4	2	2	0	0	0	0.1256	1	5793	5793		0.69767	0.24315	1	177900	+		6692	13348	3333	3353	8438	8438					0.013426637112615936
GAAARARTTAS	11	Unmodified	_GAAARARTTAS_					0	0	0		ENST00000186436.9_1_2:98611998-98612313:-|nuORF	ENST00000186436.9_1_2:98611998-98612313:-|nuORF	ENST00000186436.9_1_2:98611998-98612313:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.0350219607353	3	344.856345	1031.5472	-1.2529	-0.00043206	-0.1945	-6.7074E-05	-1.4474	-0.00049914	344.85644554157864	56.853	0.316	56.853	56.725	57.041	0					14	10	2	0	0	0	0.14606	1	23756	23756		0	0	1	437650			6693	5507	3334	3354	8439	8439					0.03269304900868519
GAAGGKIG	8	Unmodified	_GAAGGKIG_					0	0	0			REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	315.6832153201103	2	315.682114	629.349674	0.30327	9.5736E-05	3.3809	0.0010673	3.6841	0.001163	315.6830737412687	27.577	0.30728	27.848	27.648	27.956	0.27119					14	9	2	0	0	0	0.89178	1	11535	11535		0.69038	0	1	3092700	+		6694	9003	3335	3355	8440	8440					0.020173304289073712
GAAGGKIG	8	Unmodified	_GAAGGKIG_					0	0	0			REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.6829101443291	2	315.682114	629.349674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.992	1	28.264	27.764	28.764	1.2715								0	0	0	1.0178	1	11307	11307		0.69038	0	1		+		6695	9003	3335	3355	8441	8441					0.020173304289073712
GAAGGKIG	8	Unmodified	_GAAGGKIG_					0	0	0			REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	315.682114	629.349674	0.30327	9.5736E-05	3.3809	0.0010673	3.6841	0.001163	315.6830737412687	27.577	0.30728	27.848	27.648	27.956	0.27119	-0.19285	0.00013059	NaN	0.69038	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3092700	+		6696	9003	3335	3355							0.020173304289073712
GAAGGKIG	8	Unmodified	_GAAGGKIG_					0	0	0			REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	REV__tr|A0A7D6VS54|A0A7D6VS54_9CLOTFormate--tetrahydrofolateligaseOS=ClostridiumintestinaleOX=36845GN=fhsPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	315.682114	629.349674	-0.0025546	-8.0643E-07	3.0075	0.00094943	3.005	0.00094862	315.6830068164884	26.487	0.26993	28.234	28.099	28.369	1.747	0.19285	-0.00010511	NaN	0.69038	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2511600	+		6697	9003	3335	3355							0.020173304289073712
GAAGKIPR	8	Unmodified	_GAAGKIPR_					0	0	0			REV__nc|ENSG00000120802|P42167-2|TMPO	REV__nc|ENSG00000120802|P42167-2|TMPO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	769.4692260622978	1	769.467898	768.460622	1.3269	0.001021	2.1856	0.0016817	3.5125	0.0027028	769.4694165017007	108.29	0.21785	108.29	108.2	108.42	0					20	10	3	0	0	0	0.89051	1	46617	46617		2.3027	1.6124	1	67429000	+		6698	9579	3336	3356	8442	8442					0.0671297013699359
GAAGKIPR	8	Unmodified	_GAAGKIPR_					0	0	0			REV__nc|ENSG00000120802|P42167-2|TMPO	REV__nc|ENSG00000120802|P42167-2|TMPO	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	769.467898	768.460622	1.3269	0.001021	2.1856	0.0016817	3.5125	0.0027028	769.4694165017007	108.29	0.21785	108.29	108.2	108.42	0	-0.056491	0.00054878	NaN	2.3027	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	67429000	+		6699	9579	3336	3356							0.0671297013699359
GAAGKIPR	8	Unmodified	_GAAGKIPR_					0	0	0			REV__nc|ENSG00000120802|P42167-2|TMPO	REV__nc|ENSG00000120802|P42167-2|TMPO	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	769.467898	768.460622	2.7856	0.0021435	-0.12187	-9.3773E-05	2.6638	0.0020497	769.467191648673	108.23	0.089569	108.39	108.35	108.44	0.15795	0.039703	-0.0012267	NaN	2.3027	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9883200	+		6700	9579	3336	3356							0.0671297013699359
GAAHLLVP	8	Unmodified	_GAAHLLVP_					0	0	0		ENST00000496645.5_1_1:159899888-159901393:-|nuORF;ENST00000493195.5_1_1:159899139-159902434:-|nuORF;ENST00000476102.1_1_1:159898784-159904055:-|nuORF;nc|ENSG00000085552|Q9P2J2-2|IGSF9;ENSG00000085552|ENST00000368094|IGSF9	ENST00000496645.5_1_1:159899888-159901393:-|nuORF	ENST00000496645.5_1_1:159899888-159901393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.4645873904228	1	777.46175	776.454474	2.6189	0.0020361	2.652	0.0020618	5.2709	0.004098	777.4635177115023	108.92	0.91776	109.08	108.67	109.58	0.15898					86	44	2	0	0	0	0.89176	1	47184	47184		0.79363	0	1	18832000			6701	1062	3337	3357	8443	8443					0.05730451905469636
GAAPTMRKEK	10	Unmodified	_GAAPTMRKEK_					0	0	0			REV__ENSG00000185668|ENST00000373012|POU3F1	REV__ENSG00000185668|ENST00000373012|POU3F1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2522155642509	3	363.534214	1087.58081	-0.32535	-0.00011828	3.7212	0.0013528	3.3958	0.0012345	363.53571114305913	10.007	0.19044	10.752	10.634	10.825	0.74462					8	5	2	0	0	0	0.12518	1	4165	4165		8.9762	2.7705	1	286650	+		6702	11471	3338	3358	8444	8444					0.040525903484194714
GAAREGRRR	9	Unmodified	_GAAREGRRR_					0	0	0			REV__ENST00000264079.10_1_19:7595197-7598755:+|nuORF	REV__ENST00000264079.10_1_19:7595197-7598755:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.7980224490166	2	514.794655	1027.57476	2.1918	0.0011284	0.62556	0.00032204	2.8174	0.0014504	514.7944286240562	58.339	0.61428	58.339	58.074	58.689	0					58	18	4	0	0	0	0.76456	1	24467	24467		4.756	0	1	5597200	+		6703	12211	3339	3359	8445	8445					0.062072529517990915
GAARKIDQV	9	Unmodified	_GAARKIDQV_					0	0	0			REV__NMD3|p.E473*|1|0.16|ENSG00000169251|chr3:161250813-161250829|ATGAAGGAGCACCTCGA/-|frameshift_variant	REV__NMD3|p.E473*|1|0.16|ENSG00000169251|chr3:161250813-161250829|ATGAAGGAGCACCTCGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2810546755791	2	479.277441	956.540328	2.6042	0.0012481	2.4621	0.0011801	5.0663	0.0024282	479.27921221883975	62.845	1.1168	64.789	64.195	65.312	1.9444					55	35	2	0	0	0	0.68551	1	26294	26294		7.9102	0.62092	1	1043000	+		6704	10940	3340	3360	8446	8446					0.060319920203255606
GAAVALYPHK	10	Unmodified	_GAAVALYPHK_					0	0	0		tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7916137576103	2	513.790184	1025.56581	1.5214	0.0007817	2.7073	0.001391	4.2288	0.0021727	513.7913656486941	30.322	0.18482	30.322	30.223	30.408	0					9	5	2	0	0	0	0.85617	1	12698	12698		6.7232	3.1267	1	568510			6705	16767	3341	3361	8447	8447					0.05405466542742943
GAAVALYPHK	10	Unmodified	_GAAVALYPHK_					0	0	0		tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	513.790184	1025.56581	1.2731	0.00065409	2.4441	0.0012557	3.7171	0.0019098	513.791099554426	29.94	0.17719	30.225	30.115	30.293	0.2859	0.013772	-4.4582E-05	NaN	6.7232	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	685340			6706	16767	3341	3361							0.05405466542742943
GAAVALYPHK	10	Unmodified	_GAAVALYPHK_					0	0	0		tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	513.790184	1025.56581	1.2409	0.00063754	2.5157	0.0012925	3.7565	0.0019301	513.7914562773599	28.758	0.12199	30.041	29.947	30.069	1.2825	-0.17088	2.8997E-05	NaN	6.7232	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	357180			6707	16767	3341	3361							0.05405466542742943
GAAVALYPHK	10	Unmodified	_GAAVALYPHK_					0	0	0		tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	tr|A0A7D6VPI6|A0A7D6VPI6_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18765PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	513.790184	1025.56581	1.0899	0.00055998	1.1075	0.00056904	2.1974	0.001129	513.7914451019734	28.484	0.153	30.259	30.183	30.336	1.7754	0.04724	-0.001418	NaN	6.7232	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443470			6708	16767	3341	3361							0.05405466542742943
GAAWCCQC	8	Unmodified	_GAAWCCQC_					0	0	0			REV__ENST00000602095.5_1_19:53589175-53589337:-|nuORF	REV__ENST00000602095.5_1_19:53589175-53589337:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	841.2816650271416	1	841.278976	840.2717	2.4623	0.0020715	-4.1203	-0.0034663	-1.658	-0.0013948	841.2784799195607	82.734	0.27409	84.404	84.236	84.51	1.67					13	8	2	0	0	0	0.89176	1	34726	34726		0.79363	0	1	615780	+		6709	14118	3342	3362	8448	8448					-0.1548250981466026
GAAWRRGPRV	10	Unmodified	_GAAWRRGPRV_					0	0	0		ENST00000457894.4_1_X:38664754-38665171:+|nuORF	ENST00000457894.4_1_X:38664754-38665171:+|nuORF	ENST00000457894.4_1_X:38664754-38665171:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3232910037041	2	563.323048	1124.63154	1.0647	0.00059976	-0.61218	-0.00034485	0.4525	0.0002549	563.3227806462518	21.476	0.36369	22.653	22.445	22.809	1.177					19	11	2	0	0	0	0.87699	1	8933	8933		3.9444	0	1	699510			6710	6651	3343	3363	8449	8449					0.0742130050830383
GADAWCLL	8	Unmodified	_GADAWCLL_					0	0	0			REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	424.7025634646416	2	424.702189	847.389824	2.3126	0.00098215	-0.083408	-3.5423E-05	2.2292	0.00094673	424.70211262808215	40.995	0.37827	42.321	42.084	42.462	1.3254					19	11	2	0	0	0	0.87106	1	17175	17175		14.582	0	1	1107600	+		6711	8870	3344	3364	8450	8450					-0.039974909628540445
GADAWCLL	8	Unmodified	_GADAWCLL_					0	0	0			REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	424.7031738162041	2	424.702189	847.389824	2.1348	0.00090664	-0.38949	-0.00016542	1.7453	0.00074122	424.7019169164792	40.492	0.31581	42.354	42.201	42.517	1.8624					15	9	2	0	0	0	0.87106	1	17003	17003		14.582	0	1	998810	+		6712	8870	3344	3364	8451	8451					-0.039974909628540445
GADAWCLL	8	Unmodified	_GADAWCLL_					0	0	0			REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	REV__ENST00000556686.1_1_14:52473253-52474606:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	424.702189	847.389824	2.3126	0.00098215	-0.083408	-3.5423E-05	2.2292	0.00094673	424.70211262808215	40.995	0.37827	42.321	42.084	42.462	1.3254	-0.016805	0.00013125	NaN	14.582	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1107600	+		6713	8870	3344	3364							-0.039974909628540445
GADDLVLTL	9	Unmodified	_GADDLVLTL_					0	0	0		ENST00000498017.1_1_1:201979803-201980477:+|nuORF;ENST00000495848.1_1_1:201979803-201981353:+|nuORF;nc|ENSG00000163435|P78545-2|ELF3;ENSG00000163435|ENST00000367284|ELF3	ENST00000498017.1_1_1:201979803-201980477:+|nuORF	ENST00000498017.1_1_1:201979803-201980477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.5027953982353	1	916.498589	915.491313	2.7	0.0024746	4.0685	0.0037288	6.7685	0.0062034	916.5028603853021	70.183	0.3131	71.537	71.366	71.679	1.3536					15	9	2	0	0	0	0.042029	1	29456	29456		74.423	3.2892	1	2694600			6714	3681	3345	3365	8452	8452					0.030186589406980602
GADFLASVVF	10	Unmodified	_GADFLASVVF_					0	0	0		ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2697021365166	2	513.26875	1024.52295	2.9095	0.0014933	0.14322	7.3512E-05	3.0527	0.0015669	513.2690018268418	80.906	0.55833	82.602	82.394	82.953	1.6959					36	17	3	0	0	0	0.79268	1	33920	33920		13.042	0.80181	1	2857900			6715	4879	3346	3366	8453	8453					0.011666516946661432
GADLRTEHEKY	11	Unmodified	_GADLRTEHEKY_					0	0	0		nc|ENSG00000137513|Q96I59-2|NARS2;ENSG00000137513|ENST00000281038|NARS2	nc|ENSG00000137513|Q96I59-2|NARS2	nc|ENSG00000137513|Q96I59-2|NARS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	659.8254882693291	2	659.822941	1317.63133	1.8926	0.0012488	3.582	0.0023635	5.4746	0.0036123	659.8259497866429	80.842	0.46667	81.133	80.871	81.338	0.29056					24	14	2	0	0	0	1.0362	1	33835	33835		1.3295	0	1	597980			6716	2774	3347	3367	8454	8454					-0.014782087928551846
GAEFDLVFYL	10	Unmodified	_GAEFDLVFYL_					0	0	0			REV__ENST00000463504.5_1_3:31921019-32010971:-|nuORF	REV__ENST00000463504.5_1_3:31921019-32010971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2939941287041	2	587.294965	1172.57538	1.9107	0.0011221	-3.4523	-0.0020275	-1.5416	-0.0009054	587.2929186087231	56.84	0.27644	58.254	58.093	58.369	1.4145					16	8	3	0	0	0	0.65574	1	23848	23848		20.454	2.0805	1	4177900	+		6717	13216	3348	3368	8455	8455					-0.00400809962366111
GAEGKPLP	8	Unmodified	_GAEGKPLP_					0	0	0			REV__ENSG00000214338|ENST00000525778|SOGA3	REV__ENSG00000214338|ENST00000525778|SOGA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	768.4239379763603	1	768.42503	767.417754	1.8808	0.0014452	-3.0703	-0.0023593	-1.1895	-0.00091407	768.422620977271	66.63	0.4407	66.954	66.718	67.158	0.32449					28	13	3	0	0	0	0.89178	1	27893	27893		0.69038	0	1	3392300	+		6718	11852	3349	3369	8456	8456					0.024741552888940532
GAELPLAHCQL	11	Unmodified	_GAELPLAHCQL_					0	0	0		ENST00000422732.2_10:47098053-47098326:-|nuORF	ENST00000422732.2_10:47098053-47098326:-|nuORF	ENST00000422732.2_10:47098053-47098326:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2979003787041	2	576.297516	1150.58048	2.2509	0.0012972	-0.26185	-0.0001509	1.9891	0.0011463	576.2976199211522	40.988	0.50077	42.313	42.023	42.524	1.3254					56	15	5	0	0	0	0.37492	1	17109	17109		27.629	0	1	17847000			6719	6451	3350	3370	8457	8457					0.011211706285621403
GAERASPEPQR	11	Unmodified	_GAERASPEPQR_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.2491332888603	3	399.870542	1196.5898	-0.041907	-1.6757E-05	-1.2031	-0.0004811	-1.245	-0.00049786	400.20493407214013	12.257	0.15294	13.044	12.971	13.124	0.78751					6	4	2	0	0	0	0.14606	1	5058	5058		2.6312	0.72486	1	425640			6720	5143	3351	3371	8458	8458					-0.00063344761542794
GAFCDVDT	8	Unmodified	_GAFCDVDT_					0	0	0		ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	ENSG00000131187|ENST00000253496|F12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	827.3284179568291	1	827.323996	826.316719	2.9947	0.0024776	-1.5865	-0.0013126	1.4082	0.0011651	827.3227337260303	101.91	0.1485	102.1	101.99	102.14	0.19076					9	4	3	0	0	0	0.88958	1	42839	42839		2.8892	0	1	15504000			6721	2482	3352	3372	8459	8459					-0.10338664476125814
GAFGLPITV	9	Unmodified	_GAFGLPITV_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	874.5067626833916	1	874.503281	873.496004	3.1197	0.0027282	1.1099	0.00097059	4.2296	0.0036988	874.5042337624627	82.692	0.53376	83.904	83.602	84.136	1.2125					50	16	4	0	0	0	0.03795	5	34710	34629;34672;34710;34750;34799		77.984	16.627	1	41299000			6722	5008	3353	3373	8460;8461;8462;8463;8464	8462					0.05419587874143872
GAFGLPITV	9	Unmodified	_GAFGLPITV_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7566100955009	2	437.755278	873.496004	3.4568	0.0015133	0.46516	0.00020363	3.922	0.0017169	437.7554917598272	82.661	0.47392	83.874	83.634	84.108	1.2125					39	14	3	0	0	0	0.046105	3	34713	34661;34713;34754		70.865	34.398	1	13050000			6723	5008	3353	3373	8465;8466;8467	8466					0.05419587874143872
GAFGLPITV	9	Unmodified	_GAFGLPITV_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.7573730349541	2	437.755278	873.496004	3.4988	0.0015316	0.23914	0.00010468	3.738	0.0016363	437.7554870701476	82.207	0.44177	83.877	83.639	84.081	1.67					33	13	3	0	0	0	0.046105	3	34489	34444;34489;34530		70.865	30.416	1	8390200			6724	5008	3353	3373	8468;8469;8470	8469					0.05419587874143872
GAFGLPITV	9	Unmodified	_GAFGLPITV_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000473649.1_1_7:142961996-142965927:+|nuORF	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	874.5077392458916	1	874.503281	873.496004	3.3042	0.0028895	0.79996	0.00069957	4.1041	0.0035891	874.5039276140083	82.209	0.50442	83.879	83.639	84.144	1.67					47	15	4	0	0	0	0.042029	3	34462	34462;34500;34540		74.423	17.14	1	37547000			6725	5008	3353	3373	8471;8472;8473	8471					0.05419587874143872
GAFICKMVPF	10	Unmodified	_GAFICKMVPF_					0	0	0		ENST00000512235.1_1_4:122261523-122301889:-|nuORF;ENSG00000186867|ENST00000394427|QRFPR	ENST00000512235.1_1_4:122261523-122301889:-|nuORF	ENST00000512235.1_1_4:122261523-122301889:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.7861205935478	2	556.785198	1111.55584	1.8144	0.0010102	-0.25862	-0.000144	1.5557	0.00086621	556.7852712988737	42.408	0.63316	43.748	43.413	44.046	1.3399					44	19	4	0	0	0	0.84024	1	17841	17841		7.9102	1.187	1	8591300			6726	4808	3354	3374	8474	8474					0.004528192215047966
GAGAAVRLH	9	Unmodified	_GAGAAVRLH_					0	0	0		ENST00000395936.5_2_17:15162478-15165760:-|nuORF;ENST00000312280.7_1_17:15162478-15168500:-|nuORF	ENST00000395936.5_2_17:15162478-15165760:-|nuORF	ENST00000395936.5_2_17:15162478-15165760:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.2465392947197	2	426.245944	850.477334	0.8139	0.00034692	1.0533	0.00044897	1.8672	0.00079589	426.2462267416038	69.123	0.43483	69.123	68.83	69.265	0					39	13	4	0	0	0	0.83213	1	28690	28690		2.0598	1.2661	1	9689200			6727	5809	3355	3375	8475	8475					0.046114710229517186
GAGCFIAA	8	Unmodified	_GAGCFIAA_					0	0	0			REV__ENST00000609742.2_1_10:33177235-33177406:-|nuORF	REV__ENST00000609742.2_1_10:33177235-33177406:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0697814822197	2	355.170524	708.326496	-1.5393	-0.00054671	-1.5405	-0.00054713	-3.0798	-0.0010938	355.1700145633484	11.805	0.65885	12.499	12.194	12.852	0.69396					28	20	2	0	0	0	2.3239	1	4870	4870		0.79363	0	1	368290	+		6728	14153	3356	3376	8476	8476					-0.039334316800932356
GAGCFIAA	8	Unmodified	_GAGCFIAA_					0	0	0			REV__ENST00000609742.2_1_10:33177235-33177406:-|nuORF	REV__ENST00000609742.2_1_10:33177235-33177406:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0693542361259	2	355.170524	708.326496	-0.34345	-0.00012198	-2.949	-0.0010474	-3.2925	-0.0011694	355.16964212678613	11.687	0.37903	12.464	12.208	12.587	0.77627					16	11	2	0	0	0	2.3239	1	4864	4864		0.79363	0	1	287000	+		6729	14153	3356	3376	8477	8477					-0.039334316800932356
GAGGGGGC	8	Unmodified	_GAGGGGGC_					0	0	0			REV__ENSG00000122691|ENST00000242261|TWIST1	REV__ENSG00000122691|ENST00000242261|TWIST1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.8042480349541	1	535.192922	534.185645	1.4476	0.00077476	1.4879	0.00079629	2.9355	0.0015711	535.1905911874961	58.536	0.56491	59.954	59.815	60.38	1.4181					25	17	2	0	0	0	2.3239	1	24640	24640		0	0	1	763980	+		6730	9173	3357	3377	8478	8478					-0.10008010333501716
GAGLRGPV	8	Unmodified	_GAGLRGPV_					0	0	0			REV__ENST00000343938.8_1_1:1263420-1264233:+|nuORF	REV__ENST00000343938.8_1_1:1263420-1264233:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	726.4287597537041	1	726.425699	725.418422	2.6793	0.0019463	2.5635	0.0018622	5.2429	0.0038085	726.4286223772783	96.605	0.18159	96.71	96.635	96.816	0.105					9	5	2	0	0	0	0.88958	1	40433	40433		2.8892	0	1	1793800	+		6731	12514	3358	3378	8479	8479					0.044729947286214156
GAGLRGPV	8	Unmodified	_GAGLRGPV_					0	0	0			REV__ENST00000343938.8_1_1:1263420-1264233:+|nuORF	REV__ENST00000343938.8_1_1:1263420-1264233:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	726.425699	725.418422	2.6793	0.0019463	2.5635	0.0018622	5.2429	0.0038085	726.4286223772783	96.605	0.18159	96.71	96.635	96.816	0.105	0	0	NaN	2.8892	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1793800	+		6732	12514	3358	3378							0.044729947286214156
GAGWQVAA	8	Unmodified	_GAGWQVAA_					0	0	0			REV__ENST00000465681.1_1_7:1065755-1066043:-|nuORF	REV__ENST00000465681.1_1_7:1065755-1066043:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.1959106326103	2	380.192845	758.371138	2.6642	0.0010129	2.9946	0.0011385	5.6587	0.0021514	380.1941299537594	108.52	0.23705	108.57	108.4	108.64	0.050652					29	13	3	0	0	0	0.88958	1	46627	46627		2.8892	0.31174	1	69368000	+		6733	13234	3359	3379	8480	8480					-0.01771284542394369
GAHGPGVAPLL	11	Unmodified	_GAHGPGVAPLL_					0	0	0			REV__ENSG00000186806|ENST00000335624|VSIG10L	REV__ENSG00000186806|ENST00000335624|VSIG10L	MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7868835330009	2	494.782359	987.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.07	1	53.466	52.966	53.966	1.3966								0	0	0	0.63767	1	21800	21800		15.847	1.2655	1		+		6734	11512	3360	3380	8481	8481					0.05589180025708629
GAIDFDCQCFE	11	Unmodified	_GAIDFDCQCFE_					0	0	0			REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	REV__ENST00000510104.5_1_5:140071123-140075505:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2372924685478	2	624.239006	1246.46346	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.87	1	64.815	64.315	65.315	1.9444								0	0	0	0.63775	1	26381	26381		1.4819	1.0236	1		+		6735	9373	3361	3381	8482	8482					-0.14991355373331317
GAIHHLSCYL	10	Unmodified	_GAIHHLSCYL_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|222|1|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|222|1|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|222|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.2786132693291	2	557.279126	1112.5437	1.5454	0.00086121	-1.3332	-0.00074295	0.2122	0.00011826	557.2782212167565	63.11	0.31432	63.11	62.957	63.272	0					21	9	3	0	0	0	0.87343	1	26371	26371		4.3292	1.7518	1	960990			6736	7622	3362	3382	8483	8483					-0.00807081197331172
GAIRIRHFCRR	11	Unmodified	_GAIRIRHFCRR_					0	0	0			REV__ENST00000571816.5_2_17:4843432-4843489:+|nuORF	REV__ENST00000571816.5_2_17:4843432-4843489:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	692.6484863162041	2	692.896389	1383.77822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.91	1	114.09	113.59	114.59	0.17579								0	0	0	0.63775	1	49373	49373		3.5965	2.1146	1		+		6737	13968	3363	3383	8484	8484					0.1016865440174115
GAISAHCKLSL	11	Unmodified	_GAISAHCKLSL_					0	0	0		AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2181884646416	2	550.300059	1098.58556	1.61	0.00088601	-1.6213	-0.00089218	-0.011219	-6.1737E-06	550.299248986469	70.495	0.43217	72.333	71.979	72.411	1.8378					14	13	2	0	0	0	0.14606	1	29461	29461		6.2058	4.146	1	641990			6738	57	3364	3384	8485	8485					0.04021474491196386
GAISAHCKLSL	11	Unmodified	_GAISAHCKLSL_					0	0	0		AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	AluY_dup98873|chr19:54106194-54106468:-|1.0550791275867215|0.0649823089056785|4.02|429.0|13|1|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.300059	1098.58556	2.4579	0.0013526	-2.0461	-0.001126	0.41178	0.0002266	550.2996772537615	71.038	0.20998	72.38	72.241	72.451	1.3415	0.023511	-0.00030788	NaN	6.2058	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1124200			6739	57	3364	3384							0.04021474491196386
GAITAHCSLDL	11	Unmodified	_GAITAHCSLDL_					0	0	0		ENST00000420219.5_1_13:30932431-30946471:-|nuORF;nc|ENSG00000232560|A6NIU2|LINC01549	ENST00000420219.5_1_13:30932431-30946471:-|nuORF	ENST00000420219.5_1_13:30932431-30946471:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2180663943291	2	550.773874	1099.53319	2.0876	0.0011498	-0.086114	-4.7429E-05	2.0014	0.0011023	550.7747039321621	43.769	0.49372	45.712	45.368	45.862	1.9438					26	15	3	0	0	0	0.14606	1	18262	18262		3.2813	0.97858	1	1149500			6740	6443	3365	3385	8486	8486					-0.012591086424208697
GAITAHCSLDL	11	Unmodified	_GAITAHCSLDL_					0	0	0		ENST00000420219.5_1_13:30932431-30946471:-|nuORF;nc|ENSG00000232560|A6NIU2|LINC01549	ENST00000420219.5_1_13:30932431-30946471:-|nuORF	ENST00000420219.5_1_13:30932431-30946471:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.773874	1099.53319	2.2134	0.0012191	0.62106	0.00034206	2.8345	0.0015611	550.7744785796933	44.376	0.25876	45.742	45.577	45.836	1.3653	0.014656	0.00019081	NaN	3.2813	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1089900			6741	6443	3365	3385							-0.012591086424208697
GAIVRDLQNL	10	Unmodified	_GAIVRDLQNL_					0	0	0		ENST00000603670.1_1_1:26589757-26589817:-|nuORF	ENST00000603670.1_1_1:26589757-26589817:-|nuORF	ENST00000603670.1_1_1:26589757-26589817:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2208129763603	2	549.81693	1097.61931	4.6191	0.0025396	2.9293	0.0016106	7.5484	0.0041502	549.8187155016578	87.839	0.28735	89.307	89.145	89.433	1.468					14	8	2	0	0	0	0.12513	1	37037	37037		4.3292	0.73274	1	428920			6742	7551	3366	3386	8487	8487					0.07440219254613112
GAKFYKNGK	9	Unmodified	_GAKFYKNGK_					0	0	0			REV__ENSG00000154174|ENST00000284320|TOMM70	REV__ENSG00000154174|ENST00000284320|TOMM70	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	507.2148620486259	2	506.782359	1011.55016	0.6405	0.00032459	0.032047	1.6241E-05	0.67254	0.00034083	506.7817844294604	11.577	0.12226	11.577	11.513	11.635	0					5	3	2	0	0	0	0.11463	1	4772	4772		7.9102	0.62092	1	253520	+		6743	10462	3367	3387	8488	8488					0.04485180025710633
GAKPPKGG	8	Unmodified	_GAKPPKGG_					0	0	0			REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	711.4156371951103	1	711.4148	710.407523	1.4112	0.0010039	0.36799	0.00026179	1.7792	0.0012657	711.4146997454155	107.87	0.19696	107.87	107.75	107.95	0					24	10	3	0	0	0	0.89178	1	46332	46332		0.69038	0	1	135860000	+		6744	15324	3368	3388	8489	8489					0.04073592354336597
GAKPPKGG	8	Unmodified	_GAKPPKGG_					0	0	0			REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	711.4148	710.407523	1.4112	0.0010039	0.36799	0.00026179	1.7792	0.0012657	711.4146997454155	107.87	0.19696	107.87	107.75	107.95	0	-0.047113	0.00062392	NaN	0.69038	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	135860000	+		6745	15324	3368	3388							0.04073592354336597
GAKPPKGG	8	Unmodified	_GAKPPKGG_					0	0	0			REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	711.4148	710.407523	2.7026	0.0019227	-0.55097	-0.00039197	2.1516	0.0015307	711.4141260112807	107.83	0.17897	107.89	107.79	107.97	0.052452	-0.030865	-2.9839E-05	NaN	0.69038	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	107650000	+		6746	15324	3368	3388							0.04073592354336597
GAKPPKGG	8	Unmodified	_GAKPPKGG_					0	0	0			REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	711.4148	710.407523	2.6667	0.0018971	-0.82274	-0.00058531	1.8439	0.0013118	711.4139449424418	107.81	0.20724	107.96	107.84	108.05	0.15781	0.047116	-0.00022318	NaN	0.69038	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	626880000	+		6747	15324	3368	3388							0.04073592354336597
GAKPPKGG	8	Unmodified	_GAKPPKGG_					0	0	0			REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	REV__tr|A0A7D6VMU8|A0A7D6VMU8_9CLOTDUF4355domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13180PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	711.4148	710.407523	2.5815	0.0018365	-0.92943	-0.00066121	1.6521	0.0011753	711.4138427173652	107.79	0.20206	107.95	107.83	108.03	0.15795	0.030862	-0.00029908	NaN	0.69038	26	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443920000	+		6748	15324	3368	3388							0.04073592354336597
GAKQLILV	8	Unmodified	_GAKQLILV_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2827026247978	2	421.278921	840.543289	3.2318	0.0013615	3.016	0.0012706	6.2479	0.0026321	421.2808786966656	107.77	0.23722	107.93	107.81	108.05	0.15795					37	12	4	0	0	0	0.89178	1	46395	46395		0.69038	0	1	2117099999.9999998			6749	477	3369	3389	8490	8490					0.11663867145148288
GAKRHSGL	8	Unmodified	_GAKRHSGL_					0	0	0			REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2392455935478	2	413.238119	824.461684	0.46811	0.00019344	1.3896	0.00057425	1.8577	0.00076769	413.2387038087496	71.107	0.71988	71.107	70.537	71.257	0					45	22	3	0	0	0	0.8873	1	29520	29520		4.3292	0	1	2872700	+		6750	8809	3370	3390	8491	8491					0.04243184505912723
GAKRHSGL	8	Unmodified	_GAKRHSGL_					0	0	0			REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2386047244072	2	413.238119	824.461684	0.52111	0.00021534	0.40259	0.00016636	0.9237	0.00038171	413.23829808419526	71.918	0.47409	71.918	71.668	72.142	0					40	14	4	0	0	0	0.8909	1	29931	29931		2.0598	0	1	11279000	+		6751	8809	3370	3390	8492	8492					0.04243184505912723
GAKRHSGL	8	Unmodified	_GAKRHSGL_					0	0	0			REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2393371462822	2	413.238119	824.461684	1.9248	0.00079539	0.65782	0.00027184	2.5826	0.0010672	413.23834179239384	71.698	0.47563	72.022	71.751	72.227	0.32359					40	14	4	0	0	0	0.89051	1	30032	30032		2.3027	0	1	14935000	+		6752	8809	3370	3390	8493	8493					0.04243184505912723
GAKRHSGL	8	Unmodified	_GAKRHSGL_					0	0	0			REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	REV__ENST00000521249.1_1_14:102697914-102698193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2394897341728	2	413.238119	824.461684	2.777	0.0011476	0.79429	0.00032823	3.5713	0.0014758	413.2383901706793	70.853	0.4706	72.206	71.906	72.376	1.3536					33	14	3	0	0	0	0.8873	1	29761	29761		4.3292	0	1	11223000	+		6753	8809	3370	3390	8494	8494					0.04243184505912723
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2697631716728	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8569	1	3.9589	3.4589	4.4589	0.10199								0	0	0	1.0178	1	1592	1592		0.69038	0	1		+		6754	13866	3371	3391	8495	8495					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2691528201103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9616	1	4.0636	3.5636	4.5636	0.10199								0	0	0	1.0178	1	1636	1636		0.69038	0	1		+		6755	13866	3371	3391	8496	8496					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2709838747978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0884	1	4.1904	3.6904	4.6904	0.10199								0	0	0	1.0178	1	1689	1689		0.69038	0	1		+		6756	13866	3371	3391	8497	8497					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2688171267509	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1776	1	4.2796	3.7796	4.7796	0.10199								0	0	0	1.0178	1	1726	1726		0.69038	0	1		+		6757	13866	3371	3391	8498	8498					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2696105837822	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2863	1	4.3883	3.8883	4.8883	0.10199								0	0	0	1.0178	1	1771	1771		0.69038	0	1		+		6758	13866	3371	3391	8499	8499					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2692443728447	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4081	1	4.4961	3.9961	4.9961	0.08803								0	0	0	1.0178	1	1822	1822		0.69038	0	1		+		6759	13866	3371	3391	8500	8500					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2703124880791	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3259	1	5.4139	4.9139	5.9139	0.08803								0	0	0	1.0178	1	2200	2200		0.69038	0	1		+		6760	13866	3371	3391	8501	8501					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2683288455009	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4744	1	5.5624	5.0624	6.0624	0.08803								0	0	0	1.0178	1	2262	2262		0.69038	0	1		+		6761	13866	3371	3391	8502	8502					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2690307497978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7108	1	5.7907	5.2907	6.2907	0.079923								0	0	0	1.0178	1	2360	2360		0.69038	0	1		+		6762	13866	3371	3391	8503	8503					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2700378298759	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8126	1	5.8925	5.3925	6.3925	0.079923								0	0	0	1.0178	1	2402	2402		0.69038	0	1		+		6763	13866	3371	3391	8504	8504					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2683288455009	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.059643	1	0.72703	0.22703	1.227	0.66738								0	0	0	1.0178	1	24	24		0.69038	0	1		+		6764	13866	3371	3391	8505	8505					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2697021365166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.29421	1	0.9616	0.4616	1.4616	0.66738								0	0	0	1.0178	1	120	120		0.69038	0	1		+		6765	13866	3371	3391	8506	8506					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2689697146416	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.39993	1	1.0673	0.56731	1.5673	0.66738								0	0	0	1.0178	1	163	163		0.69038	0	1		+		6766	13866	3371	3391	8507	8507					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2691223025322	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.77108	1	1.4244	0.9244	1.9244	0.65331								0	0	0	1.0178	1	316	316		0.69038	0	1		+		6767	13866	3371	3391	8508	8508					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2694274783134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.88267	1	1.536	1.036	2.036	0.65331								0	0	0	1.0178	1	361	361		0.69038	0	1		+		6768	13866	3371	3391	8509	8509					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2707397341728	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.98443	1	1.6377	1.1377	2.1377	0.65331								0	0	0	1.0178	1	403	403		0.69038	0	1		+		6769	13866	3371	3391	8510	8510					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2693664431572	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.099	1	1.7523	1.2523	2.2523	0.65331								0	0	0	1.0178	1	450	450		0.69038	0	1		+		6770	13866	3371	3391	8511	8511					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2687866091728	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.196	1	1.8493	1.3493	2.3493	0.65331								0	0	0	1.0178	1	489	489		0.69038	0	1		+		6771	13866	3371	3391	8512	8512					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2693969607353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2971	1	1.9504	1.4504	2.4504	0.65331								0	0	0	1.0178	1	531	531		0.69038	0	1		+		6772	13866	3371	3391	8513	8513					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2693664431572	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3967	1	2.05	1.55	2.55	0.65331								0	0	0	1.0178	1	572	572		0.69038	0	1		+		6773	13866	3371	3391	8514	8514					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2701293826103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4931	1	2.1464	1.6464	2.6464	0.65331								0	0	0	1.0178	1	612	612		0.69038	0	1		+		6774	13866	3371	3391	8515	8515					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2661315798759	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8424	1	2.4958	1.9958	2.9958	0.65331								0	0	0	1.0178	1	756	756		0.69038	0	1		+		6775	13866	3371	3391	8516	8516					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2706786990166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0439	1	2.6781	2.1781	3.1781	0.63417								0	0	0	1.0178	1	838	838		0.69038	0	1		+		6776	13866	3371	3391	8517	8517					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2689697146416	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1391	1	2.7732	2.2732	3.2732	0.63417								0	0	0	1.0178	1	878	878		0.69038	0	1		+		6777	13866	3371	3391	8518	8518					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2698242068291	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3313	1	2.9655	2.4655	3.4655	0.63417								0	0	0	1.0178	1	959	959		0.69038	0	1		+		6778	13866	3371	3391	8519	8519					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2680541872978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4304	1	3.0645	2.5645	3.5645	0.63417								0	0	0	1.0178	1	1000	1000		0.69038	0	1		+		6779	13866	3371	3391	8520	8520					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2688476443291	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5239	1	3.1581	2.6581	3.6581	0.63417								0	0	0	1.0178	1	1039	1039		0.69038	0	1		+		6780	13866	3371	3391	8521	8521					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2692138552666	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7497	1	3.3839	2.8839	3.8839	0.63417								0	0	0	1.0178	1	1132	1132		0.69038	0	1		+		6781	13866	3371	3391	8522	8522					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2692748904228	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8434	1	3.4776	2.9776	3.9776	0.63417								0	0	0	1.0178	1	1171	1171		0.69038	0	1		+		6782	13866	3371	3391	8523	8523					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2656738162041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9688	1	3.6029	3.1029	4.1029	0.63417								0	0	0	1.0178	1	1224	1224		0.69038	0	1		+		6783	13866	3371	3391	8524	8524					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2687255740166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1055	1	3.7396	3.2396	4.2396	0.63417								0	0	0	1.0178	1	1281	1281		0.69038	0	1		+		6784	13866	3371	3391	8525	8525					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2705566287041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.203	1	3.8266	3.3266	4.3266	0.62362								0	0	0	1.0178	1	1322	1322		0.69038	0	1		+		6785	13866	3371	3391	8526	8526					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2705566287041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3186	1	3.9423	3.4423	4.4423	0.62362								0	0	0	1.0178	1	1370	1370		0.69038	0	1		+		6786	13866	3371	3391	8527	8527					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2705566287041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4169	1	4.0405	3.5405	4.5405	0.62362								0	0	0	1.0178	1	1411	1411		0.69038	0	1		+		6787	13866	3371	3391	8528	8528					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2707092165947	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5244	1	4.148	3.648	4.648	0.62362								0	0	0	1.0178	1	1455	1455		0.69038	0	1		+		6788	13866	3371	3391	8529	8529					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2684203982353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6215	1	4.2451	3.7451	4.7451	0.62362								0	0	0	1.0178	1	1495	1495		0.69038	0	1		+		6789	13866	3371	3391	8530	8530					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2702209353447	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8407	1	4.4643	3.9643	4.9643	0.62362								0	0	0	1.0178	1	1585	1585		0.69038	0	1		+		6790	13866	3371	3391	8531	8531					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2692443728447	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.94	1	4.5636	4.0636	5.0636	0.62362								0	0	0	1.0178	1	1625	1625		0.69038	0	1		+		6791	13866	3371	3391	8532	8532					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2700073122978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0355	1	4.6591	4.1591	5.1591	0.62362								0	0	0	1.0178	1	1665	1665		0.69038	0	1		+		6792	13866	3371	3391	8533	8533					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2693969607353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1654	1	4.789	4.289	5.289	0.62362								0	0	0	1.0178	1	1719	1719		0.69038	0	1		+		6793	13866	3371	3391	8534	8534					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2680847048759	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3826	1	5.0038	4.5038	5.5038	0.62127								0	0	0	1.0178	1	1809	1809		0.69038	0	1		+		6794	13866	3371	3391	8535	8535					0.1039411620519104
GAKRPALL	8	Unmodified	_GAKRPALL_					0	0	0			REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	REV__ENST00000555771.2_1_14:71762138-71788475:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2686035037041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4754	1	5.0966	4.5966	5.5966	0.62127								0	0	0	1.0178	1	1848	1848		0.69038	0	1		+		6795	13866	3371	3391	8536	8536					0.1039411620519104
GAKVCQGRVCI	11	Unmodified	_GAKVCQGRVCI_					0	0	0			REV__ENSG00000134917|ENST00000257359|ADAMTS8	REV__ENSG00000134917|ENST00000257359|ADAMTS8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	378.2012512087822	3	378.535449	1132.58452	0.012128	4.5908E-06	1.4128	0.00053478	1.4249	0.00053937	378.53622455014647	55.1	0.14088	57.069	56.988	57.129	1.9684					7	4	2	0	0	0	0.14606	1	23120	23120		4.7159	0	1	1604000	+		6796	9924	3372	3392	8537	8537					0.023529368506615356
GAKYFPEYAEK	11	Unmodified	_GAKYFPEYAEK_					0	0	0		ENST00000478856.5_1_3:100053614-100067682:+|nuORF;ENST00000465368.5_1_3:100053614-100064548:+|nuORF;ENSG00000114021|ENST00000394140|NIT2	ENST00000478856.5_1_3:100053614-100067682:+|nuORF	ENST00000478856.5_1_3:100053614-100067682:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8826782107353	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.102	1	20.161	19.661	20.661	1.0585								0	0	0	0.63775	1	7959	7959		0.45452	0.21867	1				6797	1845	3373	3393	8538	8538					-0.009546375306626942
GALAPLMM	8	Unmodified	_GALAPLMM_					0	0	0		ENSG00000149742|ENST00000279178|SLC22A9	ENSG00000149742|ENST00000279178|SLC22A9	ENSG00000149742|ENST00000279178|SLC22A9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1804687380791	2	402.211335	802.408117	-0.36215	-0.00014566	0.23091	9.2875E-05	-0.13124	-5.2785E-05	402.21018734109657	26.373	0.47852	26.373	26.117	26.596	0					21	15	2	0	0	0	2.3239	1	10983	10983		0.79363	0	1	724090			6798	3249	3374	3394	8539	8539					-0.000990723124800752
GALAPLMM	8	Unmodified	_GALAPLMM_					0	0	0		ENSG00000149742|ENST00000279178|SLC22A9	ENSG00000149742|ENST00000279178|SLC22A9	ENSG00000149742|ENST00000279178|SLC22A9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1802245974541	2	402.211335	802.408117	0.97976	0.00039407	-0.56663	-0.0002279	0.41313	0.00016617	402.21028365734423	25.324	0.33921	25.576	25.335	25.675	0.25197					18	10	2	0	0	0	2.3239	1	10559	10559		0.79363	0	1	547700			6799	3249	3374	3394	8540	8540					-0.000990723124800752
GALAQPLII	9	Unmodified	_GALAQPLII_					0	0	0			REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2910949587822	2	448.284203	894.553853	1.58	0.0007083	1.6893	0.0007573	3.2694	0.0014656	448.2851171565862	67.432	0.67491	69.302	68.999	69.674	1.87					49	21	3	0	0	0	0.82604	1	28401	28401		2.3027	0	1	4105400	+		6800	15539	3375	3395	8541	8541					0.1023584979958514
GALFDNENNY	10	Unmodified	_GALFDNENNY_					0	0	0			REV__ENSG00000254726|ENST00000532414|MEX3A	REV__ENSG00000254726|ENST00000532414|MEX3A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	578.7896606326103	2	578.74891	1155.48327	2.7822	0.0016102	-2.1694	-0.0012555	0.61275	0.00035463	578.7474251412368	62.49	0.27274	63.903	63.743	64.016	1.4134					10	8	2	0	0	0	0.12525	1	26226	26226		6.7232	0	1	469550	+		6801	11967	3376	3396	8542	8542					-0.08825520046730162
GALFDNENNY	10	Unmodified	_GALFDNENNY_					0	0	0			REV__ENSG00000254726|ENST00000532414|MEX3A	REV__ENSG00000254726|ENST00000532414|MEX3A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	578.74891	1155.48327	2.8146	0.001629	-3.3478	-0.0019375	-0.53316	-0.00030857	578.7465088346432	61.948	0.21673	63.905	63.751	63.968	1.9571	0.0010639	-0.0011128	NaN	6.7232	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439220	+		6802	11967	3376	3396							-0.08825520046730162
GALGELPWAL	10	Unmodified	_GALGELPWAL_					0	0	0			REV__ENSG00000177427|ENST00000323019|MIEF2	REV__ENSG00000177427|ENST00000323019|MIEF2	MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7839233279228	2	513.784567	1025.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.698	1	73.04	72.54	73.54	1.3415								0	0	0	0.65286	1	30091	30091		11.64	0.14559	1		+		6803	11218	3377	3397	8543	8543					0.04282644448608153
GALRRAAA	8	Unmodified	_GALRRAAA_					0	0	0			REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	785.4752075076103	1	785.474046	784.46677	2.8362	0.0022278	-2.529	-0.0019865	0.30723	0.00024132	785.4724188289583	109.58	0.26008	109.74	109.63	109.89	0.1548					14	9	2	0	0	0	0.88958	1	47534	47534		2.8892	0	1	6295400	+		6804	12098	3378	3398	8544	8544					0.06591488368496812
GALRRAAA	8	Unmodified	_GALRRAAA_					0	0	0			REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	785.474046	784.46677	2.6641	0.0020926	-4.2211	-0.0033156	-1.557	-0.001223	785.4696050310218	109.61	0.30185	109.77	109.65	109.95	0.15898	0.014394	-0.00046477	NaN	2.8892	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5516800	+		6805	12098	3378	3398							0.06591488368496812
GALRRAAA	8	Unmodified	_GALRRAAA_					0	0	0			REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	REV__ENST00000229595.5_1_6:119215395-119215593:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	785.474046	784.46677	2.8362	0.0022278	-2.529	-0.0019865	0.30723	0.00024132	785.4724188289583	109.58	0.26008	109.74	109.63	109.89	0.1548	-0.014394	0.00086435	NaN	2.8892	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6295400	+		6806	12098	3378	3398							0.06591488368496812
GALSLLLL	8	Unmodified	_GALSLLLL_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	799.5286132693291	1	799.528767	798.521491	2.7275	0.0021807	4.4379	0.0035483	7.1654	0.005729	799.5291131654939	101.07	0.17372	101.25	101.17	101.34	0.18048					8	5	2	0	0	0	0.87803	1	42527	42527		10.183	0	1	10017000			6807	7972	3379	3399	8545	8545					0.11417062396560596
GALSYVNIDH	10	Unmodified	_GALSYVNIDH_					0	0	0			REV__nc|ENSG00000125107|A5YKK6-4|CNOT1	REV__nc|ENSG00000125107|A5YKK6-4|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7755004763603	2	544.772188	1087.52982	2.876	0.0015668	-2.1572	-0.0011752	0.71887	0.00039162	544.7743842871917	74.926	0.85915	76.232	75.756	76.615	1.3063					78	27	5	0	0	0	0.22411	1	31487	31487		46.021	6.0713	1	11432000	+		6808	9659	3380	3400	8546	8546					-0.010440354247748473
GALVGLTQTL	10	Unmodified	_GALVGLTQTL_					0	0	0			REV__nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	REV__nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7903320193291	2	486.78985	971.565146	0.75347	0.00036678	0.42678	0.00020775	1.1802	0.00057453	486.7898689909281	56.417	0.44864	57.832	57.584	58.033	1.4145					28	14	3	0	0	0	0.73251	1	23634	23634		16.942	2.104	1	8747900	+		6809	8618	3381	3401	8547	8547					0.07822627103041668
GANEREELSK	10	Unmodified	_GANEREELSK_					0	0	0			REV__ENSG00000068394|ENST00000156109|GPKOW	REV__ENSG00000068394|ENST00000156109|GPKOW	MSMS	GG20161007_CRH_Patient100_A02_01	1	566.7824584841728	2	566.783284	1131.55202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.542	1	11.542	11.042	12.042	0								0	0	0	0.65462	1	4769	4769		10.074	0	1		+		6810	8702	3382	3402	8548	8548					-0.008498557469920343
GANPVEIRR	9	Unmodified	_GANPVEIRR_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1;nc|ENSG00000144381|P10809-2|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000503199.1_1_5:21882861-21883359:+|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;ENST00000388967.3_1_3:36809324-36810203:-|nuORF	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.4913207888603	3	337.861319	1010.56213	-1.3669	-0.00046181	1.6847	0.0005692	0.31785	0.00010739	337.86184200364875	13.058	0.28251	13.785	13.695	13.977	0.72639					13	8	2	0	0	0	0.11685	1	5427	5427		5.2969	0	1	533390			6811	3074	3383	3403	8549	8549					0.05726796768908571
GANPVEIRR	9	Unmodified	_GANPVEIRR_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1;nc|ENSG00000144381|P10809-2|HSPD1;ENST00000461097.1_1_2:198361816-198363572:-|nuORF;ENST00000503199.1_1_5:21882861-21883359:+|nuORF;ENST00000476746.5_1_2:198360008-198364584:-|nuORF;ENST00000388967.3_1_3:36809324-36810203:-|nuORF	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.4908325076103	3	337.861319	1010.56213	-0.3928	-0.00013271	0.38937	0.00013155	-0.003432	-1.1595E-06	337.8612873534396	12.856	0.18076	13.643	13.52	13.701	0.78751					11	5	3	0	0	0	0.11743	1	5328	5328		4.5289	0	1	461080			6812	3074	3383	3403	8550	8550					0.05726796768908571
GANTIWLSFP	10	Unmodified	_GANTIWLSFP_					0	0	0			REV__tr|A0A553SSH6|A0A553SSH6_NIACIMajorfacilitatorsuperfamilydomain-containingprotein1OS=NialliacirculansOX=1397GN=CEQ21_03100PE=4SV=1	REV__tr|A0A553SSH6|A0A553SSH6_NIACIMajorfacilitatorsuperfamilydomain-containingprotein1OS=NialliacirculansOX=1397GN=CEQ21_03100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2901489138603	2	553.287474	1104.5604	2.8042	0.0015515	0.17435	9.6468E-05	2.9785	0.001648	553.2887521822453	75.082	0.64838	76.389	75.936	76.585	1.3063					44	20	4	0	0	0	0.6819	1	31529	31529		19.257	3.4098	1	4365000	+		6813	15205	3384	3404	8551	8551					0.01229742960299518
GAPEVRECLV	10	Unmodified	_GAPEVRECLV_					0	0	0			REV__ENST00000448869.1_1_1:156616564-156616675:-|nuORF	REV__ENST00000448869.1_1_1:156616564-156616675:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1617309451103	2	536.776416	1071.53828	2.047	0.0010988	-1.796	-0.00096403	0.25104	0.00013475	536.7751843070164	39.964	0.34157	41.827	41.677	42.019	1.8624					16	10	2	0	0	0	0.12539	1	16710	16710		1.8442	0	1	920840	+		6814	13118	3385	3405	8552	8552					0.00537195220204012
GAPGHAAA	8	Unmodified	_GAPGHAAA_					0	0	0			REV__ENST00000440293.5_1_12:48191201-48213572:-|nuORF	REV__ENST00000440293.5_1_12:48191201-48213572:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.3231689333916	1	651.320899	650.313623	2.8794	0.0018754	-3.1624	-0.0020598	-0.28308	-0.00018438	651.3207917649016	61.078	0.93419	62.498	61.964	62.898	1.4196					34	29	2	0	0	0	0.88958	1	25620	25620		2.8892	0	1	558460	+		6815	13080	3386	3406	8553	8553					-0.025521267479575727
GAPGHAAA	8	Unmodified	_GAPGHAAA_					0	0	0			REV__ENST00000440293.5_1_12:48191201-48213572:-|nuORF	REV__ENST00000440293.5_1_12:48191201-48213572:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	651.6561157107353	1	651.320899	650.313623	2.8794	0.0018754	-3.1624	-0.0020598	-0.28308	-0.00018438	651.3207917649016	61.078	0.93419	62.498	61.964	62.898	1.4196					34	29	2	0	0	0	2.3239	1	25422	25422		0.79363	0	1	558460	+		6816	13080	3386	3406	8554	8554					-0.025521267479575727
GAPGPAGF	8	Unmodified	_GAPGPAGF_					0	0	0		ENST00000560945.1_1_15:64443974-64444139:+|nuORF	ENST00000560945.1_1_15:64443974-64444139:+|nuORF	ENST00000560945.1_1_15:64443974-64444139:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	337.7008239626884	2	337.168839	672.323125	1.63	0.0005496	2.3559	0.00079435	3.986	0.001344	337.1696442259076	56.016	0.33428	56.337	56.167	56.501	0.32088					22	11	2	0	0	0	2.3239	1	23514	23514		0.79363	0	1	3691100			6817	7333	3387	3407	8555	8555					-0.026143584624264804
GAPLAKKVISS	11	Unmodified	_GAPLAKKVISS_					0	0	0		chr8:144791310-144791873|170|1679.29|0.69|11.25|-|0|RPL8,None|1	chr8:144791310-144791873|170|1679.29|0.69|11.25|-|0|RPL8,None|1	chr8:144791310-144791873|170|1679.29|0.69|11.25|-|0|RPL8,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1638061404228	2	535.832049	1069.64954	2.1051	0.001128	-0.029685	-1.5906E-05	2.0754	0.0011121	535.8319195190362	61.22	0.34603	61.22	61.047	61.393	0					16	10	2	0	0	0	0.14606	1	25591	25591		3.5965	3.0717	1	1470100			6818	292	3388	3408	8556	8556					0.11750577919792704
GAPLEMKEPL	10	Unmodified	_GAPLEMKEPL_					0	0	0		tr|A0A553SGR7|A0A553SGR7_NIACIBiotin-dependentcarboxyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_11345PE=4SV=1	tr|A0A553SGR7|A0A553SGR7_NIACIBiotin-dependentcarboxyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_11345PE=4SV=1	tr|A0A553SGR7|A0A553SGR7_NIACIBiotin-dependentcarboxyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_11345PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2977783083916	2	542.788992	1083.56343	1.6046	0.00087097	2.4312	0.0013196	4.0358	0.0021906	542.7893647615107	48.371	0.47063	49.758	49.333	49.804	1.388					22	14	2	0	0	0	0.81324	1	20126	20126		10.824	1.4408	1	3449200			6819	16119	3389	3409	8557	8557					0.024992500227881465
GAPLKLKC	8	Unmodified	_GAPLKLKC_					0	0	0		nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF;ENST00000467894.5_1_1:33790468-33797238:-|nuORF;nc|ENSG00000134686|Q8IXK0-2|PHC2;nc|ENSG00000134686|Q8IXK0-4|PHC2;nc|ENSG00000134686|Q8IXK0|PHC2;ENSG00000134686|ENST00000683057|PHC2	nc|ENSG00000134686|Q8IXK0-3|PHC2	nc|ENSG00000134686|Q8IXK0-3|PHC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	829.4966918826103	1	829.496421	828.489145	2.8628	0.0023747	-4.0623	-0.0033696	-1.1994	-0.00099493	829.4927170195892	109.46	0.18459	109.62	109.52	109.7	0.15898					17	7	3	0	0	0	0.88409	1	47549	47549		6.3541	0	1	11710000			6820	6858	3390	3410	8558	8558					0.06803951721906287
GAPNLVLA	8	Unmodified	_GAPNLVLA_					0	0	0		ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4452392458916	1	754.445766	753.438489	1.8967	0.001431	-3.0771	-0.0023215	-1.1803	-0.00089049	754.4430775807334	65.132	0.5122	65.459	65.162	65.674	0.32689					35	15	3	0	0	0	0.88587	1	27212	27212		5.2307	0	1	4152000			6821	6769	3391	3411	8559	8559					0.05190745668562613
GAPNLVLA	8	Unmodified	_GAPNLVLA_					0	0	0		ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	754.445766	753.438489	1.9505	0.0014715	-3.7455	-0.0028257	-1.795	-0.0013542	754.4426462387463	65.23	0.4723	65.23	64.977	65.449	0	-0.25842	-0.00038203	NaN	5.2307	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3367800			6822	6769	3391	3411							0.05190745668562613
GAPNLVLA	8	Unmodified	_GAPNLVLA_					0	0	0		ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	754.445766	753.438489	2.0633	0.0015567	-2.5101	-0.0018938	-0.44682	-0.0003371	754.4437780332352	64.138	0.37337	65.546	65.336	65.71	1.4071	0.05729	0.00054995	NaN	5.2307	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3105500			6823	6769	3391	3411							0.05190745668562613
GAPNLVLA	8	Unmodified	_GAPNLVLA_					0	0	0		ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	ENST00000474284.1_1_19:20188811-20235834:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	754.445766	753.438489	2.4186	0.0018247	-3.5055	-0.0026447	-1.0869	-0.00082001	754.4430850283748	63.791	0.36803	65.719	65.52	65.888	1.928	0.23065	-0.00020102	NaN	5.2307	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2430900			6824	6769	3391	3411							0.05190745668562613
GAPPPFDA	8	Unmodified	_GAPPPFDA_					0	0	0		ENSG00000083635|ENST00000379161|NUFIP1	ENSG00000083635|ENST00000379161|NUFIP1	ENSG00000083635|ENST00000379161|NUFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	771.3677245974541	1	771.367181	770.359904	1.6958	0.0013081	-0.090593	-6.9881E-05	1.6052	0.0012382	771.367299069592	78.407	0.43375	80.142	79.855	80.289	1.735					26	13	3	0	0	0	0.88409	1	32843	32843		6.3541	0	1	2795500			6825	1042	3392	3412	8560	8560					-0.03446106636533841
GAPRWNDYEVP	11	Unmodified	_GAPRWNDYEVP_					0	0	0		nc|ENSG00000166743|Q08AH1-2|ACSM1;ACSM1|p.E354Dfs*21|1|0.09|ENSG00000166743|chr16:20640515-20640515|C/-|frameshift_variant;ENSG00000166743|ENST00000520010|ACSM1	nc|ENSG00000166743|Q08AH1-2|ACSM1	nc|ENSG00000166743|Q08AH1-2|ACSM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	652.3051025271416	2	652.306926	1302.5993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.432	1	95.62	95.12	96.12	1.1887								0	0	0	0.63775	1	39727	39727		3.5965	1.9439	1				6826	18	3393	3413	8561	8561					-0.039895764760331076
GAPVHLLA	8	Unmodified	_GAPVHLLA_					0	0	0			REV__PNPLA7|p.V595Dfs*35|1|0.23|ENSG00000130653|chr9:137498144-137498145|-/T|frameshift_variant	REV__PNPLA7|p.V595Dfs*35|1|0.23|ENSG00000130653|chr9:137498144-137498145|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.4668456912041	1	777.46175	776.454474	2.6189	0.0020361	2.652	0.0020618	5.2709	0.004098	777.4635177115023	108.92	0.91776	109.08	108.67	109.58	0.15898					86	44	2	0	0	0	0.89176	1	47510	47510		0.79363	0	1	18832000	+		6827	9791	3394	3414	8562	8562					0.057304519054810044
GAPWLFYFV	9	Unmodified	_GAPWLFYFV_					0	0	0		ENSG00000009335|ENST00000348165|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C;nc|ENSG00000009335|Q15386-3|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2185546755791	2	550.284203	1098.55385	2.1066	0.0011593	-3.9898	-0.0021955	-1.8832	-0.0010363	550.2808528810966	40.485	0.43061	41.795	41.514	41.945	1.3102					20	13	2	0	0	0	0.11898	1	16890	16890		2.3027	0.24298	1	754070			6828	537	3395	3415	8563	8563					0.008518497995510188
GAPWPCSH	8	Unmodified	_GAPWPCSH_					0	0	0			REV__ENST00000588376.5_1_19:418930-422520:-|nuORF	REV__ENST00000588376.5_1_19:418930-422520:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3617431521416	1	854.361384	853.354108	3.1	0.0026485	-1.9072	-0.0016294	1.1928	0.0010191	854.3597455274606	94.781	0.39859	95.969	95.773	96.171	1.1887					23	13	2	0	0	0	0.88958	1	39880	39880		2.8892	0	1	6024600	+		6829	14045	3396	3416	8564	8564					-0.0784352841984628
GAREDGSY	8	Unmodified	_GAREDGSY_					0	0	0		tr|A0A553SGA4|A0A553SGA4_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_10505PE=3SV=1	tr|A0A553SGA4|A0A553SGA4_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_10505PE=3SV=1	tr|A0A553SGA4|A0A553SGA4_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_10505PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	854.3652831912041	1	854.363886	853.35661	2.787	0.0023811	-3.9778	-0.0033985	-1.1908	-0.0010174	854.3599821166162	100.32	0.188	100.4	100.28	100.47	0.072716					18	5	4	0	0	0	0.89008	1	41980	41980		2.5775	0	1	46803000			6830	16102	3397	3417	8565	8565					-0.07593401481187811
GARRPHSRAH	10	Unmodified	_GARRPHSRAH_					0	0	0		ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	ENST00000360561.7_1_10:123923067-123923412:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.8764526247978	3	382.211345	1143.61221	0.07044	2.6923E-05	-1.1012	-0.00042089	-1.0308	-0.00039396	382.2109397113304	17.771	0.18554	19.218	19.079	19.265	1.448					8	5	2	0	0	0	0.12535	1	7378	7378		6.1918	2.3155	1	752080			6831	6031	3398	3418	8566	8566					0.046143442174070515
GARTLWQLRRT	11	Unmodified	_GARTLWQLRRT_					0	0	0		ENST00000405515.5_2_11:67957596-67981223:-|nuORF	ENST00000405515.5_2_11:67957596-67981223:-|nuORF	ENST00000405515.5_2_11:67957596-67981223:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	679.3896362185478	2	679.394202	1356.77385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.17	1	118.33	117.83	118.83	0.16237								0	0	0	0.63775	1	51021	51021		1.4819	0.28856	1				6832	6360	3399	3419	8567	8567					0.10973468459815194
GARVVKFK	8	Unmodified	_GARVVKFK_					0	0	0			REV__ENST00000465315.1_1_2:131099168-131099453:-|nuORF	REV__ENST00000465315.1_1_2:131099168-131099453:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1969787478447	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.153	1	86.312	85.812	86.812	1.159								0	0	0	1.0178	1	35732	35732		0.40072	0.40072	1		+		6833	9989	3400	3420	8568	8568					0.10978091613571905
GASCYSPRSAF	11	Unmodified	_GASCYSPRSAF_					0	0	0			REV__chr19:34194641-34208929|101|14.17|0.42|5.08|+|2|LSM14A,LSM14A|1	REV__chr19:34194641-34208929|101|14.17|0.42|5.08|+|2|LSM14A,LSM14A|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.2565185427666	2	573.255848	1144.49714	2.0791	0.0011919	0.78538	0.00045022	2.8645	0.0016421	573.2553155656624	63.737	0.34236	65.144	64.93	65.272	1.4071					29	10	4	0	0	0	0.85967	1	26749	26749		12.241	6.4802	1	1772300	+		6834	8288	3401	3421	8569	8569					-0.06932565819261072
GASESLAH	8	Unmodified	_GASESLAH_					0	0	0		nc|ENSG00000145700|Q8N7Z5|ANKRD31;ENSG00000145700|ENST00000506364|ANKRD31	nc|ENSG00000145700|Q8N7Z5|ANKRD31	nc|ENSG00000145700|Q8N7Z5|ANKRD31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	771.3676025271416	1	771.363158	770.355882	2.1521	0.0016601	3.9657	0.003059	6.1178	0.0047191	771.3663063396169	78.721	0.43765	79.988	79.724	80.161	1.2668					29	13	3	0	0	0	0.87935	2	33016	33016;33068		9.3474	0	1	2368700			6835	3118	3402	3422	8570;8571	8570					-0.03848196130229553
GASFERDEQF	10	Unmodified	_GASFERDEQF_					0	0	0			REV__ENST00000564124.5_1_16:48580029-48653834:-|nuORF	REV__ENST00000564124.5_1_16:48580029-48653834:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	593.8108398318291	2	593.262185	1184.50982	1.4842	0.0008805	-1.6341	-0.00096944	-0.14991	-8.8934E-05	593.2613753572987	66.795	0.30075	68.684	68.497	68.797	1.8889					19	9	3	0	0	0	0.12471	1	28047	28047		9.3831	0	1	1070400	+		6836	9089	3403	3423	8572	8572					-0.07505831155390297
GASGGGGL	8	Unmodified	_GASGGGGL_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	575.7790405154228	1	575.278366	574.271089	2.4289	0.0013973	-2.5859	-0.0014876	-0.15699	-9.0313E-05	575.2767944851538	45.106	0.2262	46.471	46.337	46.563	1.3653					9	6	2	0	0	0	2.3239	1	18892	18892		0	0	1	443140	+		6837	13422	3404	3424	8573	8573					-0.033075218761950964
GASIVEDK	8	Unmodified	_GASIVEDK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	410.1728698611259	2	409.71635	817.418148	-0.013373	-5.479E-06	1.5861	0.00064984	1.5727	0.00064436	409.7165923015	11.469	0.25229	12.231	12.099	12.351	0.76165					12	7	2	0	0	0	2.3239	1	4735	4735		30.637	10.183	1	202670			6838	3217	3405	3425	8574	8574					0.0021353021809318307
GASWWINLSL	10	Unmodified	_GASWWINLSL_					0	0	0		ENST00000485814.1_1_3:114012878-114014762:+|nuORF	ENST00000485814.1_1_3:114012878-114014762:+|nuORF	ENST00000485814.1_1_3:114012878-114014762:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8026611208916	2	573.800749	1145.58694	2.43	0.0013943	0.082164	4.7146E-05	2.5122	0.0014415	573.8009002954518	59.213	0.82502	60.633	60.381	61.206	1.4196					79	26	5	0	0	0	0.35292	1	24925	24925		36.127	4.8587	1	98673000			6839	6857	3406	3426	8575	8575					0.01997431851600595
GATLQEHTCV	10	Unmodified	_GATLQEHTCV_					0	0	0		ENSG00000144591|ENST00000313597|GMPPA;nc|ENSG00000144591|Q96IJ6-2|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	ENSG00000144591|ENST00000313597|GMPPA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.2946044802666	2	529.750398	1057.48624	2.6709	0.0014149	4.2161	0.0022335	6.887	0.0036484	529.7516596585543	63.424	0.47686	65.369	65.091	65.567	1.9444					26	14	2	0	0	0	0.12397	1	26525	26525		10.824	2.2306	1	583710			6840	3084	3407	3427	8576	8576					-0.04019968193551904
GATLVLLGK	9	Unmodified	_GATLVLLGK_					0	0	0			REV__tr|A0A7D7A1N2|A0A7D7A1N2_9CLOTAcetylornithineaminotransferaseOS=ClostridiumintestinaleOX=36845GN=argDPE=3SV=1	REV__tr|A0A7D7A1N2|A0A7D7A1N2_9CLOTAcetylornithineaminotransferaseOS=ClostridiumintestinaleOX=36845GN=argDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	436.2827941775322	2	436.284203	870.553853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.679	1	63.009	62.509	63.509	0.32974								0	0	0	0.42693	1	26261	26261		2.0598	1.2661	1		+		6841	15830	3408	3428	8577	8577					0.11339849799583135
GATVLFEPWTF	11	Unmodified	_GATVLFEPWTF_					0	0	0		tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3190185427666	2	634.321514	1266.62847	0.71973	0.00045654	-1.409	-0.00089378	-0.6893	-0.00043724	634.3209711247497	52.193	0.7352	53.589	53.318	54.053	1.3966					32	23	2	0	0	0	0.83203	1	21799	21799		13.906	0.86358	1	1006200			6842	16409	3409	3429	8578	8578					0.005825678202654672
GATVLFEPWTF	11	Unmodified	_GATVLFEPWTF_					0	0	0		tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3228027224541	2	634.321514	1266.62847	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.522	1	53.497	52.997	53.997	1.9753								0	0	0	0.63764	1	21591	21591		19.257	6.2145	1				6843	16409	3409	3429	8579	8579					0.005825678202654672
GAVGAERRGP	10	Unmodified	_GAVGAERRGP_					0	0	0		ENST00000435706.6_2_3:25705727-25705949:-|nuORF	ENST00000435706.6_2_3:25705727-25705949:-|nuORF	ENST00000435706.6_2_3:25705727-25705949:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2662536501884	2	485.264865	968.515176	2.1234	0.0010304	3.4201	0.0016597	5.5435	0.0026901	485.26630225633244	82.024	0.48413	82.024	81.701	82.185	0					27	15	2	0	0	0	0.89803	1	34205	34205		1.3295	0	1	1918100			6844	6524	3410	3430	8580	8580					0.02965937217766168
GAVGFITVV	9	Unmodified	_GAVGFITVV_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	862.5052368044853	1	862.503281	861.496004	2.1871	0.0018864	0.16652	0.00014362	2.3536	0.00203	862.5031956448053	68.063	0.46483	69.933	69.704	70.169	1.87					33	14	3	0	0	0	0.18999	1	28513	28513		34.187	2.0704	1	6825200			6845	4939	3411	3431	8581	8581					0.059715878741258166
GAVTSMCW	8	Unmodified	_GAVTSMCW_					0	0	0		ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3555175662041	1	854.353522	853.346245	3.0885	0.0026386	1.7278	0.0014761	4.8162	0.0041148	854.3533878324903	101.99	0.11761	102.18	102.11	102.23	0.19076					6	3	2	0	0	0	0.88504	1	42895	42895		5.7604	0.52976	1	15063000			6846	1812	3412	3432	8582	8582					-0.0862942373162241
GAVTSMCW	8	Unmodified	_GAVTSMCW_					0	0	0		ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	854.353522	853.346245	1.2037	0.0010284	6.0916	0.0052044	7.2953	0.0062328	854.3583033098148	102.19	0.15975	102.19	102.1	102.26	0	-0.01476	0.00094637	NaN	5.7604	13	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43107000			6847	1812	3412	3432							-0.0862942373162241
GAVTSMCW	8	Unmodified	_GAVTSMCW_					0	0	0		ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	854.353522	853.346245	2.787	0.002381	4.5452	0.0038832	7.3321	0.0062642	854.3570034277626	102.14	0.17025	102.2	102.13	102.3	0.062805	-0.00055031	-0.00037484	NaN	5.7604	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100360000			6848	1812	3412	3432							-0.0862942373162241
GAVTYNLFIQV	11	Unmodified	_GAVTYNLFIQV_					0	0	0			REV__ENSG00000137860|ENST00000347644|SLC28A2	REV__ENSG00000137860|ENST00000347644|SLC28A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	612.8350707888603	2	612.834788	1223.65502	1.4025	0.00085949	0.33033	0.00020244	1.7328	0.0010619	612.834902154359	68.679	0.21992	69.001	68.905	69.125	0.32223					9	6	2	0	0	0	0.81656	1	28778	28778		14.838	3.3436	1	415690	+		6849	10033	3413	3433	8583	8583					0.0521425671158795
GAWCWSRMC	9	Unmodified	_GAWCWSRMC_					0	0	0			REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	550.2186767458916	2	550.217157	1098.41976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.417	1	33.417	32.917	33.917	0								0	0	0	0.42693	1	14003	14003		0.6015	0	1		+		6850	13130	3414	3434	8584	8584					-0.12551198560800003
GAWCWSRMC	9	Unmodified	_GAWCWSRMC_					0	0	0			REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2170287966728	2	550.217157	1098.41976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5003	1	9.1368	8.6368	9.6368	0.63651								0	0	0	0.42693	1	3526	3526		0.6015	0	1		+		6851	13130	3414	3434	8585	8585					-0.12551198560800003
GAWCWSRMC	9	Unmodified	_GAWCWSRMC_					0	0	0			REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2180053591728	2	550.217157	1098.41976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.306	1	16.133	15.633	16.633	0.82643								0	0	0	0.42693	1	6361	6361		0.6015	0	1		+		6852	13130	3414	3434	8586	8586					-0.12551198560800003
GAWCWSRMC	9	Unmodified	_GAWCWSRMC_					0	0	0			REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	REV__ENST00000450525.6_1_17:38248437-38248713:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2188598513603	2	550.217157	1098.41976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.216	1	29.495	28.995	29.995	1.2789								0	0	0	0.42693	1	11828	11828		0.6015	0	1		+		6853	13130	3414	3434	8587	8587					-0.12551198560800003
GAWPCPSH	8	Unmodified	_GAWPCPSH_					0	0	0			REV__ENSG00000135355|ENST00000369352|GJA10	REV__ENSG00000135355|ENST00000369352|GJA10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.3619262576103	1	854.361384	853.354108	1.2037	0.0010284	-0.78896	-0.00067406	0.41471	0.00035432	854.3604759018942	100.74	0.17951	100.74	100.63	100.81	0					12	5	3	0	0	0	0.89176	1	42165	42165		0.79363	0.79363	1	7974300	+		6854	9934	3415	3435	8588	8588					-0.0784352841984628
GAWWRGWMYRD	11	Unmodified	_GAWWRGWMYRD_					0	0	0			REV__ENST00000495957.1_1_8:22459568-22459924:+|nuORF	REV__ENST00000495957.1_1_8:22459568-22459924:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	742.5867797732353	2	742.338038	1482.66152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.005	1	23.182	22.682	23.682	1.177								0	0	0	0.63775	1	9194	9194		0.35063	0	1		+		6855	13463	3416	3436	8589	8589					-0.060501286086491746
GAYEQVIKY	9	Unmodified	_GAYEQVIKY_					0	0	0		nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7812377810478	2	535.779482	1069.54441	0.83087	0.00044516	-0.27198	-0.00014572	0.55889	0.00029944	535.7797753370622	31.174	0.31408	32.455	32.311	32.625	1.2813					20	9	3	0	0	0	0.075994	1	13076	13076		57.722	30.838	1	1125200			6856	604	3417	3437	8590	8590					0.0124203672337444
GAYEQVIKY	9	Unmodified	_GAYEQVIKY_					0	0	0		nc|ENSG00000017260|P98194-2|ATP2C1;nc|ENSG00000017260|P98194-4|ATP2C1;ENSG00000017260|ENST00000510168|ATP2C1;nc|ENSG00000017260|P98194-3|ATP2C1;nc|ENSG00000017260|P98194-5|ATP2C1;nc|ENSG00000017260|P98194-8|ATP2C1;nc|ENSG00000017260|P98194-9|ATP2C1;nc|ENSG00000017260|P98194-6|ATP2C1;nc|ENSG00000017260|P98194-7|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	nc|ENSG00000017260|P98194-2|ATP2C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7789184451103	2	535.779482	1069.54441	1.0316	0.00055272	-0.93023	-0.0004984	0.10138	5.432E-05	535.7787549076412	30.713	0.26592	32.528	32.325	32.591	1.8151					15	8	2	0	0	0	0.16939	1	12859	12859		36.506	19.393	1	1129000			6857	604	3417	3437	8591	8591					0.0124203672337444
GAYGKVFLV	9	Unmodified	_GAYGKVFLV_					0	0	0		nc|ENSG00000162302|O75676-2|RPS6KA4;ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000100784|O75582-2|RPS6KA5;ENSG00000100784|ENST00000614987|RPS6KA5	nc|ENSG00000162302|O75676-2|RPS6KA4;nc|ENSG00000100784|O75582-2|RPS6KA5	nc|ENSG00000100784|O75582-2|RPS6KA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.2773925662041	2	477.276378	952.538203	2.0526	0.00097967	0.58251	0.00027802	2.6351	0.0012577	477.27652892832685	45.709	0.56531	47.085	46.864	47.43	1.3751					45	17	4	0	0	0	0.031324	1	19144	19144		85.357	25.283	1	10535000			6858	3611;1302	3418	3438	8592	8592					0.06003563282513369
GAYGKVFLV	9	Unmodified	_GAYGKVFLV_					0	0	0		nc|ENSG00000162302|O75676-2|RPS6KA4;ENSG00000162302|ENST00000334205|RPS6KA4;nc|ENSG00000100784|O75582-2|RPS6KA5;ENSG00000100784|ENST00000614987|RPS6KA5	nc|ENSG00000162302|O75676-2|RPS6KA4;nc|ENSG00000100784|O75582-2|RPS6KA5	nc|ENSG00000100784|O75582-2|RPS6KA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.2775146365166	2	477.276378	952.538203	1.7799	0.0008495	0.4227	0.00020175	2.2026	0.0010512	477.2764784811257	45.171	0.56583	47.13	46.863	47.429	1.9596					48	17	4	0	0	0	0.059546	1	18917	18917		64.236	27.73	1	10662000			6859	3611;1302	3418	3438	8593	8593					0.06003563282513369
GAYGQAVRY	9	Unmodified	_GAYGQAVRY_					0	0	0		nc|ENSG00000149823|Q9UID3-2|VPS51;ENSG00000149823|ENST00000279281|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	nc|ENSG00000149823|Q9UID3-2|VPS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7485229372978	2	492.748516	983.482479	0.43443	0.00021406	-1.2897	-0.0006355	-0.85528	-0.00042144	492.7476937347066	17.648	0.18869	18.95	18.84	19.029	1.3023					12	5	3	0	0	0	0.10294	1	7327	7327		48.346	22.947	1	723210			6860	3253	3419	3439	8594	8594					-0.009922699051116979
GCAGHTQSRAH	11	Unmodified	_GCAGHTQSRAH_					0	0	0		ENST00000462733.5_1_17:17919106-17919331:-|nuORF	ENST00000462733.5_1_17:17919106-17919331:-|nuORF	ENST00000462733.5_1_17:17919106-17919331:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	375.5051757693291	3	375.505318	1123.49412	0.0032641	1.2257E-06	-0.21596	-8.1095E-05	-0.2127	-7.9869E-05	375.5053196565467	9.8875	2.0361	9.9654	8.772	10.808	0.077971					304	107	5	0	0	0	0.83846	1	4163	4163		13.519	1.3439	1	23466000			6861	6680	3420	3440	8595	8595					-0.06268396153404865
GCAGHTQSRAH	11	Unmodified	_GCAGHTQSRAH_					0	0	0		ENST00000462733.5_1_17:17919106-17919331:-|nuORF	ENST00000462733.5_1_17:17919106-17919331:-|nuORF	ENST00000462733.5_1_17:17919106-17919331:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	375.505318	1123.49412	-0.25001	-9.388E-05	-0.61711	-0.00023173	-0.86712	-0.00032561	375.5050235693947	9.1634	0.31316	9.8979	9.7855	10.099	0.73452	-0.033775	-0.00039044	NaN	13.519	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	524580			6862	6680	3420	3440							-0.06268396153404865
GCAYHSVK	8	Unmodified	_GCAYHSVK_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	432.7034179568291	2	432.705263	863.395972	0.99063	0.00042865	-3.6043	-0.0015596	-2.6137	-0.001131	432.70349482403253	70.492	0.60019	70.492	70.179	70.78	0					51	19	3	0	0	0	0.89176	2	29346	29346;29386		0.79363	0.10326	1	40797000	+		6863	15846	3421	3441	8596;8597	8596					-0.04118972731305348
GCCCCCAE	8	Unmodified	_GCCCCCAE_					0	0	0			REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.0851623415947	2	396.086105	790.157658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.029	1	81.32	80.82	81.82	0.29056								0	0	0	1.0178	1	33874	33874		0	0	1		+		6864	14440	3422	3442	8598	8598					-0.24581483963424944
GCCGCCQCDGC	11	Unmodified	_GCCGCCQCDGC_					0	0	0			REV__ENSG00000169903|ENST00000305354|TM4SF4	REV__ENSG00000169903|ENST00000305354|TM4SF4	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.0796996951103	3	351.079138	1050.21558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.359	1	74.684	74.184	75.184	0.32464								0	0	0	0.63775	1	31102	31102		0	0	1		+		6865	10968	3423	3443	8599	8599					-0.3075159010029438
GCCGCCQCDGC	11	Unmodified	_GCCGCCQCDGC_					0	0	0			REV__ENSG00000169903|ENST00000305354|TM4SF4	REV__ENSG00000169903|ENST00000305354|TM4SF4	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.0800964236259	3	351.079138	1050.21558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.547	1	74.872	74.372	75.372	0.32464								0	0	0	0.63775	1	31181	31181		0	0	1		+		6866	10968	3423	3443	8600	8600					-0.3075159010029438
GCDEDAHE	8	Unmodified	_GCDEDAHE_					0	0	0			REV__tr|A0A553SM54|A0A553SM54_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21920PE=4SV=1	REV__tr|A0A553SM54|A0A553SM54_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21920PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.1457397341728	2	438.145432	874.276311	3.351	0.0014682	-3.0001	-0.0013145	0.35081	0.00015371	438.14392034572705	98.176	0.20173	98.432	98.332	98.534	0.25636					11	6	2	0	0	0	0.89178	1	41313	41313		0.69038	0.69038	1	11034000	+		6867	15007	3424	3444	8601	8601					-0.16585630866541123
GCDEDAHE	8	Unmodified	_GCDEDAHE_					0	0	0			REV__tr|A0A553SM54|A0A553SM54_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21920PE=4SV=1	REV__tr|A0A553SM54|A0A553SM54_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21920PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.1451599001884	2	438.145432	874.276311	3.3517	0.0014685	-3.588	-0.0015721	-0.23632	-0.00010354	438.14367419074995	98.454	0.23138	98.71	98.565	98.796	0.25636					18	7	3	0	0	0	0.89178	1	41417	41417		0.69038	0.69038	1	16794000	+		6868	15007	3424	3444	8602	8602					-0.16585630866541123
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1727477908134	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.576	1	57.991	57.491	58.491	1.4145								0	0	0	1.0178	1	23710	23710		0.79363	0	1		+		6869	11228	3425	3445	8603	8603					-0.1308575503934435
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1732971072197	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.998	1	35.821	35.321	36.321	1.8227								0	0	0	1.0178	1	14258	14258		0.79363	0	1		+		6870	11228	3425	3445	8604	8604					-0.1308575503934435
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1720153689384	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.321	1	36.144	35.644	36.644	1.8227								0	0	0	1.0178	1	14391	14391		0.79363	0	1		+		6871	11228	3425	3445	8605	8605					-0.1308575503934435
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1720458865166	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.904	1	70.757	70.257	71.257	1.853								0	0	0	1.0178	1	28912	28912		0.79363	0	1		+		6872	11228	3425	3445	8606	8606					-0.1308575503934435
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1732971072197	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.027	1	70.88	70.38	71.38	1.853								0	0	0	1.0178	1	28964	28964		0.79363	0	1		+		6873	11228	3425	3445	8607	8607					-0.1308575503934435
GCEECTYL	8	Unmodified	_GCEECTYL_					0	0	0			REV__ENSG00000182111|ENST00000420713|ZNF716	REV__ENSG00000182111|ENST00000420713|ZNF716	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1728393435478	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.904	1	71.742	71.242	72.242	1.8378								0	0	0	1.0178	1	29328	29328		0.79363	0	1		+		6874	11228	3425	3445	8608	8608					-0.1308575503934435
GCGFREPV	8	Unmodified	_GCGFREPV_					0	0	0		ENST00000398341.7_1_21:44000850-44001069:+|nuORF	ENST00000398341.7_1_21:44000850-44001069:+|nuORF	ENST00000398341.7_1_21:44000850-44001069:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	432.7049438357353	2	432.705263	863.395972	2.197	0.00095064	-2.8283	-0.0012238	-0.6313	-0.00027317	432.7037644111572	69.314	0.43652	70.679	70.472	70.908	1.3657					37	14	3	0	0	0	0.89051	1	29126	29126		2.3027	0.24298	1	7957900			6875	6323	3426	3446	8609	8609					-0.04118972731316717
GCHSCDTS	8	Unmodified	_GCHSCDTS_					0	0	0			REV__ENST00000585360.1_1_17:40497568-40497628:-|nuORF	REV__ENST00000585360.1_1_17:40497568-40497628:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1775390505791	2	405.13127	808.247988	1.7554	0.00071116	-1.3676	-0.00055408	0.38773	0.00015708	405.13098491499073	44.886	0.47614	46.845	46.576	47.052	1.9596					17	14	2	0	0	0	2.3239	1	18702	18702		0.79363	0	1	326740	+		6876	14020	3427	3447	8610	8610					-0.16380652047485
GCMYLPAYL	9	Unmodified	_GCMYLPAYL_					0	0	0			REV__ENSG00000105509|ENST00000540069|HAS1	REV__ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	344.1643554568291	3	344.16273	1029.46636	1.6915	0.00058215	0.58072	0.00019986	2.2722	0.00078201	344.1639192701377	84.2	0.36433	85.819	85.604	85.968	1.6192					33	11	4	0	0	0	0.75267	1	35325	35325		2.9952	0	1	4909800	+		6877	9179	3428	3448	8611	8611					-0.047194354578778075
GCPGEESP	8	Unmodified	_GCPGEESP_					0	0	0			REV__ENST00000320934.7_1_11:117102925-117103240:-|nuORF	REV__ENST00000320934.7_1_11:117102925-117103240:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1524230837822	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.935	1	94.706	94.206	95.206	0.77094								0	0	0	1.0178	1	39527	39527		0.79363	0	1		+		6878	12405	3429	3449	8612	8612					-0.11075237510203806
GCYNKYLQWK	10	Unmodified	_GCYNKYLQWK_					0	0	0			REV__ENSG00000165449|ENST00000395348|SLC16A9	REV__ENSG00000165449|ENST00000395348|SLC16A9	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8822814822197	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.09	1	111.14	110.64	111.64	0.047043								0	0	0	0.66254	1	47903	47903		0.15932	0	1		+		6879	10778	3430	3450	8613	8613					-0.01606853963062349
GDALALHLVL	10	Unmodified	_GDALALHLVL_					0	0	0			REV__ENSG00000213906|ENST00000533293|LTB4R2	REV__ENSG00000213906|ENST00000533293|LTB4R2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	511.2643310427666	2	511.305667	1020.59678	2.0027	0.001024	-2.6485	-0.0013542	-0.64581	-0.0003302	511.3042779135617	66.881	0.15479	67.205	67.096	67.25	0.32449					6	4	2	0	0	0	0.125	1	27960	27960		3.2813	0	1	419580	+		6880	11844	3431	3451	8614	8614					0.08730619856999056
GDCPCFCSCHC	11	Unmodified	_GDCPCFCSCHC_					0	0	0		ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	392.1131164431572	3	392.112947	1173.31701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.113	1	81.113	80.613	81.613	0								0	0	0	0.63775	1	33776	33776		0	0	1				6881	6754	3432	3452	8615	8615					-0.2627139540609278
GDDGVPGGGA	10	Unmodified	_GDDGVPGGGA_					0	0	0		sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1;sp|F5HDQ6|DNBI_HCMVMMajorDNA-bindingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DBPPE=3SV=1	sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	401.1731140017509	2	401.172307	800.330061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.04	1	105.2	104.7	105.7	0.15859								0	0	0	0.66166	1	44656	44656		1.6526	0	1				6882	15977	3433	3453	8616	8616					-0.07809090372518313
GDDGVPGGGA	10	Unmodified	_GDDGVPGGGA_					0	0	0		sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1;sp|F5HDQ6|DNBI_HCMVMMajorDNA-bindingproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=DBPPE=3SV=1	sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	sp|P17147|DNBI_HCMVAMajorDNA-bindingproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=DBPPE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	401.1721069216728	2	401.172307	800.330061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.04	1	105.21	104.71	105.71	0.16679								0	0	0	0.66166	1	44590	44590		1.6526	0	1				6883	15977	3433	3453	8617	8617					-0.07809090372518313
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	597.8571044802666	2	597.749107	1193.48366	2.1643	0.0012937	0.76009	0.00045434	2.9244	0.001748	597.7496730615086	77.172	0.37492	77.172	76.971	77.346	0					36	11	4	0	0	0	0.12461	1	32120	32120		14.838	8.1151	1	3134600	+		6884	10501	3434	3454	8618	8618					-0.1053414511752635
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	597.8575317263603	2	597.749107	1193.48366	2.0318	0.0012145	0.439	0.00026241	2.4708	0.0014769	597.7495676958242	76.776	0.34656	77.092	76.913	77.259	0.31653					33	10	4	0	0	0	0.125	1	32136	32136		10.074	5.7447	1	2470800	+		6885	10501	3434	3454	8619	8619					-0.1053414511752635
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7499877810478	2	597.749107	1193.48366	2.5054	0.0014976	-0.72916	-0.00043586	1.7763	0.0010618	597.7488401071535	75.865	0.42932	77.159	76.912	77.341	1.2938					54	13	6	0	0	0	0.6819	1	31827	31827		19.257	5.3509	1	6124300	+		6886	10501	3434	3454	8620	8620					-0.1053414511752635
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	597.8582031130791	2	597.749107	1193.48366	2.5054	0.0014976	-0.72916	-0.00043586	1.7763	0.0010618	597.7488401071535	75.865	0.42932	77.159	76.912	77.341	1.2938					54	13	6	0	0	0	0.12461	1	31867	31867		14.838	4.0143	1	6124300	+		6887	10501	3434	3454	8621	8621					-0.1053414511752635
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.7502929568291	2	597.749107	1193.48366	2.7812	0.0016625	-0.49607	-0.00029653	2.2852	0.001366	597.748937524002	75.396	0.36986	77.178	76.978	77.347	1.7817					48	11	6	0	0	0	0.78468	1	31619	31619		13.906	4.5229	1	5950200	+		6888	10501	3434	3454	8622	8622					-0.1053414511752635
GDDPEDDIYR	10	Unmodified	_GDDPEDDIYR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	597.8575317263603	2	597.749107	1193.48366	2.7812	0.0016625	-0.49607	-0.00029653	2.2852	0.001366	597.748937524002	75.396	0.36986	77.178	76.978	77.347	1.7817					48	11	6	0	0	0	0.125	1	31650	31650		10.074	3.3508	1	5950200	+		6889	10501	3434	3454	8623	8623					-0.1053414511752635
GDDVHDCD	8	Unmodified	_GDDVHDCD_					0	0	0		nc|ENSG00000204524|Q5CZA5-2|ZNF805;ENSG00000204524|ENST00000414468|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.1435424685478	2	438.145432	874.276311	0.7755	0.00033978	-3.5075	-0.0015368	-2.732	-0.001197	438.14374750009637	100.4	0.18504	100.4	100.26	100.44	0					9	5	2	0	0	0	0.89008	1	42019	42019		2.5775	0	1	13824000			6890	5148	3435	3455	8624	8624					-0.16585630866541123
GDECDPDGD	9	Unmodified	_GDECDPDGD_					0	0	0			REV__nc|ENSG00000147852|P98155-2|VLDLR	REV__nc|ENSG00000147852|P98155-2|VLDLR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	308.8997985720634	3	308.095878	921.265806	1.4202	0.00043756	-2.3419	-0.00072153	-0.92168	-0.00028396	308.0949690938411	40.449	0.15673	42.312	42.233	42.39	1.8624					6	4	2	0	0	0	0.11954	1	16977	16977		0.26902	0.26902	1	166550	+		6891	10333	3436	3456	8625	8625					-0.19797658311631494
GDFWQMIFQRK	11	Unmodified	_GDFWQMIFQRK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2467224001884	3	485.911573	1454.71289	1.1695	0.0005683	1.6268	0.00079048	2.7964	0.0013588	485.9125473671198	27.335	0.81163	27.335	27.107	27.919	0					112	26	6	0	0	0	0.98969	1	11369	11369		4.4062	0.56024	1	78638000			6892	1018	3437	3457	8626	8626					0.0037219536536667874
GDFWQMIFQRK	11	Unmodified	_GDFWQMIFQRK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9129211306572	3	485.911573	1454.71289	1.6998	0.00082594	1.081	0.00052527	2.7808	0.0013512	485.9121255267894	26.804	0.68097	27.066	26.834	27.515	0.26173					66	21	5	0	0	0	0.98969	1	11221	11221		4.4062	0	1	22208000			6893	1018	3437	3457	8627	8627					0.0037219536536667874
GDFWQMIFQRK	11	Unmodified	_GDFWQMIFQRK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.9136840701103	3	485.911573	1454.71289	1.3648	0.00066317	-0.4774	-0.00023197	0.88739	0.00043119	485.91134770633226	25.712	0.49393	26.972	26.741	27.235	1.2594					45	15	4	0	0	0	0.98455	2	10714	10714;10817		4.7159	2.2811	1	9272000			6894	1018	3437	3457	8628;8629	8628					0.0037219536536667874
GDFWQMIFQRK	11	Unmodified	_GDFWQMIFQRK_					0	0	0		nc|ENSG00000081237|P08575-4|PTPRC;nc|ENSG00000081237|P08575-9|PTPRC;nc|ENSG00000081237|P08575-10|PTPRC;nc|ENSG00000081237|P08575-8|PTPRC;nc|ENSG00000081237|P08575-7|PTPRC;nc|ENSG00000081237|P08575-5|PTPRC;nc|ENSG00000081237|P08575-6|PTPRC;ENSG00000081237|ENST00000442510|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	nc|ENSG00000081237|P08575-4|PTPRC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.9126464724541	3	485.911573	1454.71289	0.58319	0.00028338	1.368	0.00066471	1.9512	0.00094809	485.91224239601866	25.296	0.42761	27.012	26.818	27.245	1.7167					39	13	5	0	0	0	0.94603	2	10593	10546;10593		7.0371	4.4058	1	7301700			6895	1018	3437	3457	8630;8631	8631					0.0037219536536667874
GDGGSGWP	8	Unmodified	_GDGGSGWP_					0	0	0			REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF	REV__ENST00000379565.7_1_X:20227482-20284914:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	367.2691223025322	2	366.65101	731.287468	2.5624	0.0009395	0.38382	0.00014073	2.9462	0.0010802	366.65111330507955	82.551	0.36867	84.221	84.017	84.386	1.67					18	11	2	0	0	0	2.3239	1	34698	34698		0.69038	0	1	1048200	+		6896	12747	3438	3458	8632	8632					-0.08892440710087612
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414062380791	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.90041	1	1.0474	0.54745	1.5474	0.14703								0	0	0	0.42693	1	370	370		0.26902	0	1				6897	980	3439	3459	8633	8633					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0003	1	1.1473	0.64732	1.6473	0.14703								0	0	0	0.42693	1	412	412		0.26902	0	1				6898	980	3439	3459	8634	8634					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1416808962822	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2215	1	1.3686	0.86857	1.8686	0.14703								0	0	0	0.42693	1	504	504		0.26902	0	1				6899	980	3439	3459	8635	8635					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418334841728	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3486	1	1.4957	0.99567	1.9957	0.14703								0	0	0	0.42693	1	557	557		0.26902	0	1				6900	980	3439	3459	8636	8636					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5626	1	1.7096	1.2096	2.2096	0.14703								0	0	0	0.42693	1	644	644		0.26902	0	1				6901	980	3439	3459	8637	8637					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1413452029228	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7704	1	1.9174	1.4174	2.4174	0.14703								0	0	0	0.42693	1	729	729		0.26902	0	1				6902	980	3439	3459	8638	8638					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0852	1	2.2077	1.7077	2.7077	0.12256								0	0	0	0.42693	1	857	857		0.26902	0	1				6903	980	3439	3459	8639	8639					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1419250369072	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1876	1	2.3102	1.8102	2.8102	0.12256								0	0	0	0.42693	1	900	900		0.26902	0	1				6904	980	3439	3459	8640	8640					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.275	1	2.3976	1.8976	2.8976	0.12256								0	0	0	0.42693	1	937	937		0.26902	0	1				6905	980	3439	3459	8641	8641					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1417724490166	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4765	1	2.5991	2.0991	3.0991	0.12256								0	0	0	0.42693	1	1021	1021		0.26902	0	1				6906	980	3439	3459	8642	8642					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5839	1	2.7065	2.2065	3.2065	0.12256								0	0	0	0.42693	1	1065	1065		0.26902	0	1				6907	980	3439	3459	8643	8643					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6824	1	2.805	2.305	3.305	0.12256								0	0	0	0.42693	1	1106	1106		0.26902	0	1				6908	980	3439	3459	8644	8644					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9808	1	3.1034	2.6034	3.6034	0.12256								0	0	0	0.42693	1	1230	1230		0.26902	0	1				6909	980	3439	3459	8645	8645					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1842	1	3.2964	2.7964	3.7964	0.1122								0	0	0	0.42693	1	1314	1314		0.26902	0	1				6910	980	3439	3459	8646	8646					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2866	1	3.3886	2.8886	3.8886	0.10199								0	0	0	0.42693	1	1357	1357		0.26902	0	1				6911	980	3439	3459	8647	8647					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415283083916	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3861	1	3.4881	2.9881	3.9881	0.10199								0	0	0	0.42693	1	1398	1398		0.26902	0	1				6912	980	3439	3459	8648	8648					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1419860720634	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5955	1	3.6975	3.1975	4.1975	0.10199								0	0	0	0.42693	1	1484	1484		0.26902	0	1				6913	980	3439	3459	8649	8649					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7063	1	3.8083	3.3083	4.3083	0.10199								0	0	0	0.42693	1	1529	1529		0.26902	0	1				6914	980	3439	3459	8650	8650					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418640017509	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8089	1	3.9109	3.4109	4.4109	0.10199								0	0	0	0.42693	1	1572	1572		0.26902	0	1				6915	980	3439	3459	8651	8651					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418640017509	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0025	1	4.1045	3.6045	4.6045	0.10199								0	0	0	0.42693	1	1653	1653		0.26902	0	1				6916	980	3439	3459	8652	8652					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1101	1	4.2121	3.7121	4.7121	0.10199								0	0	0	0.42693	1	1697	1697		0.26902	0	1				6917	980	3439	3459	8653	8653					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2046	1	4.3066	3.8066	4.8066	0.10199								0	0	0	0.42693	1	1737	1737		0.26902	0	1				6918	980	3439	3459	8654	8654					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1420165896416	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3328	1	4.4348	3.9348	4.9348	0.10199								0	0	0	0.42693	1	1790	1790		0.26902	0	1				6919	980	3439	3459	8655	8655					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4444	1	4.5325	4.0325	5.0325	0.08803								0	0	0	0.42693	1	1837	1837		0.26902	0	1				6920	980	3439	3459	8656	8656					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5436	1	4.6316	4.1316	5.1316	0.08803								0	0	0	0.42693	1	1878	1878		0.26902	0	1				6921	980	3439	3459	8657	8657					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6489	1	4.7369	4.2369	5.2369	0.08803								0	0	0	0.42693	1	1921	1921		0.26902	0	1				6922	980	3439	3459	8658	8658					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7507	1	4.8387	4.3387	5.3387	0.08803								0	0	0	0.42693	1	1963	1963		0.26902	0	1				6923	980	3439	3459	8659	8659					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8532	1	4.9413	4.4413	5.4413	0.08803								0	0	0	0.42693	1	2005	2005		0.26902	0	1				6924	980	3439	3459	8660	8660					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9406	1	5.0286	4.5286	5.5286	0.08803								0	0	0	0.42693	1	2042	2042		0.26902	0	1				6925	980	3439	3459	8661	8661					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.032	1	5.12	4.62	5.62	0.08803								0	0	0	0.42693	1	2080	2080		0.26902	0	1				6926	980	3439	3459	8662	8662					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1283	1	5.2163	4.7163	5.7163	0.08803								0	0	0	0.42693	1	2119	2119		0.26902	0	1				6927	980	3439	3459	8663	8663					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416808962822	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.16381	1	0.8312	0.3312	1.3312	0.66738								0	0	0	0.42693	1	67	67		0.26902	0	1				6928	980	3439	3459	8664	8664					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.48931	1	1.1567	0.65669	1.6567	0.66738								0	0	0	0.42693	1	200	200		0.26902	0	1				6929	980	3439	3459	8665	8665					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412231326103	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.69457	1	1.3562	0.85617	1.8562	0.6616								0	0	0	0.42693	1	284	284		0.26902	0	1				6930	980	3439	3459	8666	8666					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417114138603	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.78438	1	1.4377	0.9377	1.9377	0.65331								0	0	0	0.42693	1	321	321		0.26902	0	1				6931	980	3439	3459	8667	8667					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.87772	1	1.531	1.031	2.031	0.65331								0	0	0	0.42693	1	359	359		0.26902	0	1				6932	980	3439	3459	8668	8668					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0769	1	1.7302	1.2302	2.2302	0.65331								0	0	0	0.42693	1	441	441		0.26902	0	1				6933	980	3439	3459	8669	8669					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1791	1	1.8324	1.3324	2.3324	0.65331								0	0	0	0.42693	1	483	483		0.26902	0	1				6934	980	3439	3459	8670	8670					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3917	1	2.0451	1.5451	2.5451	0.65331								0	0	0	0.42693	1	570	570		0.26902	0	1				6935	980	3439	3459	8671	8671					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1419250369072	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5781	1	2.2314	1.7314	2.7314	0.65331								0	0	0	0.42693	1	647	647		0.26902	0	1				6936	980	3439	3459	8672	8672					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413146853447	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.681	1	2.3343	1.8343	2.8343	0.65331								0	0	0	0.42693	1	689	689		0.26902	0	1				6937	980	3439	3459	8673	8673					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417419314384	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9679	1	2.602	2.102	3.102	0.63417								0	0	0	0.42693	1	807	807		0.26902	0	1				6938	980	3439	3459	8674	8674					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0826	1	2.7168	2.2168	3.2168	0.63417								0	0	0	0.42693	1	854	854		0.26902	0	1				6939	980	3439	3459	8675	8675					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1728	1	2.807	2.307	3.307	0.63417								0	0	0	0.42693	1	892	892		0.26902	0	1				6940	980	3439	3459	8676	8676					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.279	1	2.9132	2.4132	3.4132	0.63417								0	0	0	0.42693	1	936	936		0.26902	0	1				6941	980	3439	3459	8677	8677					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.38	1	3.0142	2.5142	3.5142	0.63417								0	0	0	0.42693	1	978	978		0.26902	0	1				6942	980	3439	3459	8678	8678					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6796	1	3.3138	2.8138	3.8138	0.63417								0	0	0	0.42693	1	1103	1103		0.26902	0	1				6943	980	3439	3459	8679	8679					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7731	1	3.4073	2.9073	3.9073	0.63417								0	0	0	0.42693	1	1142	1142		0.26902	0	1				6944	980	3439	3459	8680	8680					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9638	1	3.598	3.098	4.098	0.63417								0	0	0	0.42693	1	1222	1222		0.26902	0	1				6945	980	3439	3459	8681	8681					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0611	1	3.6953	3.1953	4.1953	0.63417								0	0	0	0.42693	1	1263	1263		0.26902	0	1				6946	980	3439	3459	8682	8682					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414062380791	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.619	1	4.2426	3.7426	4.7426	0.62362								0	0	0	0.42693	1	1494	1494		0.26902	0	1				6947	980	3439	3459	8683	8683					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1419250369072	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7359	1	4.3595	3.8595	4.8595	0.62362								0	0	0	0.42693	1	1542	1542		0.26902	0	1				6948	980	3439	3459	8684	8684					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.247	1	4.8706	4.3706	5.3706	0.62362								0	0	0	0.42693	1	1753	1753		0.26902	0	1				6949	980	3439	3459	8685	8685					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412841677666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5542	1	5.1755	4.6755	5.6755	0.62127								0	0	0	0.42693	1	1880	1880		0.26902	0	1				6950	980	3439	3459	8686	8686					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413146853447	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2844	1	5.9056	5.4056	6.4056	0.62127								0	0	0	0.42693	1	2182	2182		0.26902	0	1				6951	980	3439	3459	8687	8687					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412536501884	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3872	1	6.0085	5.5085	6.5085	0.62127								0	0	0	0.42693	1	2225	2225		0.26902	0	1				6952	980	3439	3459	8688	8688					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415283083916	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4822	1	6.1035	5.6035	6.6035	0.62127								0	0	0	0.42693	1	2264	2264		0.26902	0	1				6953	980	3439	3459	8689	8689					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413146853447	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5808	1	6.2021	5.7021	6.7021	0.62127								0	0	0	0.42693	1	2304	2304		0.26902	0	1				6954	980	3439	3459	8690	8690					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.78	1	6.4012	5.9012	6.9012	0.62127								0	0	0	0.42693	1	2386	2386		0.26902	0	1				6955	980	3439	3459	8691	8691					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413146853447	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8916	1	6.5129	6.0129	7.0129	0.62127								0	0	0	0.42693	1	2433	2433		0.26902	0	1				6956	980	3439	3459	8692	8692					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415283083916	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9847	1	6.606	6.106	7.106	0.62127								0	0	0	0.42693	1	2472	2472		0.26902	0	1				6957	980	3439	3459	8693	8693					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413452029228	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0833	1	6.7045	6.2045	7.2045	0.62127								0	0	0	0.42693	1	2512	2512		0.26902	0	1				6958	980	3439	3459	8694	8694					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1410095095634	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2828	1	6.9041	6.4041	7.4041	0.62127								0	0	0	0.42693	1	2595	2595		0.26902	0	1				6959	980	3439	3459	8695	8695					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414672732353	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3755	1	6.9968	6.4968	7.4968	0.62127								0	0	0	0.42693	1	2633	2633		0.26902	0	1				6960	980	3439	3459	8696	8696					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413452029228	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7702	1	7.3973	6.8973	7.8973	0.62713								0	0	0	0.42693	1	2798	2798		0.26902	0	1				6961	980	3439	3459	8697	8697					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411620974541	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0714	1	7.6985	7.1985	8.1985	0.62713								0	0	0	0.42693	1	2925	2925		0.26902	0	1				6962	980	3439	3459	8698	8698					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413757205009	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1691	1	7.7963	7.2963	8.2963	0.62713								0	0	0	0.42693	1	2966	2966		0.26902	0	1				6963	980	3439	3459	8699	8699					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8214	1	8.4485	7.9485	8.9485	0.62713								0	0	0	0.42693	1	3237	3237		0.26902	0	1				6964	980	3439	3459	8700	8700					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4928	1	9.1293	8.6293	9.6293	0.63651								0	0	0	0.42693	1	3523	3523		0.26902	0	1				6965	980	3439	3459	8701	8701					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1418640017509	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6876	1	9.3241	8.8241	9.8241	0.63651								0	0	0	0.42693	1	3606	3606		0.26902	0	1				6966	980	3439	3459	8702	8702					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411620974541	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8381	1	9.4746	8.9746	9.9746	0.63651								0	0	0	0.42693	1	3670	3670		0.26902	0	1				6967	980	3439	3459	8703	8703					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.86463	1	1.613	1.113	2.113	0.7484								0	0	0	0.42693	1	357	357		0.26902	0	1				6968	980	3439	3459	8704	8704					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414672732353	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0737	1	1.8221	1.3221	2.3221	0.7484								0	0	0	0.42693	1	444	444		0.26902	0	1				6969	980	3439	3459	8705	8705					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6837	1	2.4321	1.9321	2.9321	0.7484								0	0	0	0.42693	1	697	697		0.26902	0	1				6970	980	3439	3459	8706	8706					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1418334841728	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9709	1	2.7193	2.2193	3.2193	0.7484								0	0	0	0.42693	1	817	817		0.26902	0	1				6971	980	3439	3459	8707	8707					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414062380791	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0818	1	2.8302	2.3302	3.3302	0.7484								0	0	0	0.42693	1	862	862		0.26902	0	1				6972	980	3439	3459	8708	8708					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416808962822	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1039	1	3.8523	3.3523	4.3523	0.7484								0	0	0	0.42693	1	1288	1288		0.26902	0	1				6973	980	3439	3459	8709	8709					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2043	1	3.9527	3.4527	4.4527	0.7484								0	0	0	0.42693	1	1329	1329		0.26902	0	1				6974	980	3439	3459	8710	8710					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4885	1	4.2337	3.7337	4.7337	0.74525								0	0	0	0.42693	1	1447	1447		0.26902	0	1				6975	980	3439	3459	8711	8711					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6028	1	4.3481	3.8481	4.8481	0.74525								0	0	0	0.42693	1	1494	1494		0.26902	0	1				6976	980	3439	3459	8712	8712					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412231326103	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8074	1	4.5527	4.0527	5.0527	0.74525								0	0	0	0.42693	1	1578	1578		0.26902	0	1				6977	980	3439	3459	8713	8713					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416808962822	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1178	1	4.863	4.363	5.363	0.74525								0	0	0	0.42693	1	1706	1706		0.26902	0	1				6978	980	3439	3459	8714	8714					-0.04922907841284996
GDGQRSNPA	9	Unmodified	_GDGQRSNPA_					0	0	0		nc|ENSG00000078687|Q9HCJ0-1|TNRC6C;nc|ENSG00000078687|Q9HCJ0-2|TNRC6C;nc|ENSG00000078687|Q9HCJ0-4|TNRC6C;ENSG00000078687|ENST00000696270|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	nc|ENSG00000078687|Q9HCJ0-1|TNRC6C	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414672732353	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3423	1	5.0876	4.5876	5.5876	0.74525								0	0	0	0.42693	1	1799	1799		0.26902	0	1				6979	980	3439	3459	8715	8715					-0.04922907841284996
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5123779177666	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.223	1	48.223	47.723	48.723	0								0	0	0	0.65895	1	20143	20143		6.1918	0	1				6980	4668	3440	3460	8716	8716					-0.04986107572904075
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5112487673759	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7896	1	5.4109	4.9109	5.9109	0.62127								0	0	0	0.65521	1	1977	1977		9.544	1.3884	1				6981	4668	3440	3460	8717	8717					-0.04986107572904075
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5095703005791	3	381.512355	1141.51524	-0.21287	-8.1212E-05	-4.449	-0.0016974	-4.6619	-0.0017786	381.5106825313604	0.20961	0.30281	0.94539	0.73556	1.0384	0.73579					20	12	2	0	0	0	0.88031	2	28	28;93		3.5871	0.85186	1	414760			6982	4668	3440	3460	8718;8719	8718					-0.04986107572904075
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5104247927666	3	381.512355	1141.51524	-0.2129	-8.1223E-05	-3.8091	-0.0014532	-4.022	-0.0015344	381.51139133392996	7.0349	0.52213	7.7656	7.5057	8.0279	0.73074					57	39	2	0	0	0	0.88031	1	2943	2943		3.5871	0.85186	1	306270			6983	4668	3440	3460	8720	8720					-0.04986107572904075
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5094177126884	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8295	1	5.566	5.066	6.066	0.73642								0	0	0	0.65521	1	2003	2003		9.544	1.3884	1				6984	4668	3440	3460	8721	8721					-0.04986107572904075
GDHSHLFDSK	10	Unmodified	_GDHSHLFDSK_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5116760134697	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.941	1	23.557	23.057	24.057	1.6158								0	0	0	0.65066	1	9154	9154		13.615	1.3742	1				6985	4668	3440	3460	8722	8722					-0.04986107572904075
GDPARCARPAA	11	Unmodified	_GDPARCARPAA_					0	0	0			REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|369|3|anti-sense	REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|369|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.7711669802666	2	542.769457	1083.52436	2.1316	0.001157	0.35677	0.00019365	2.4884	0.0013506	542.7693318092133	83.98	0.4305	83.98	83.721	84.151	0					26	13	2	0	0	0	1.0214	1	35030	35030		2.4985	0.19575	1	10518000	+		6986	14206	3441	3461	8723	8723					-0.014060374882319593
GDPLHQELA	9	Unmodified	_GDPLHQELA_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.2466613650322	2	490.245806	978.47706	0.7121	0.0003491	0.72697	0.0003564	1.4391	0.0007055	490.24617110773465	21.085	0.68207	21.085	20.787	21.469	0					61	21	4	0	0	0	0.073578	2	8832	8694;8832		58.679	10.333	1	10644000	+		6987	10346	3442	3462	8724;8725	8725					-0.013039934875791914
GDPLHQELA	9	Unmodified	_GDPLHQELA_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2464172244072	2	490.245806	978.47706	1.3316	0.0006528	-0.014155	-6.9393E-06	1.3174	0.00064586	490.2457512187008	20.872	0.52644	21.082	20.821	21.347	0.21024					34	16	3	0	0	0	0.098163	2	8664	8664;8718		49.933	2.1979	1	1780300	+		6988	10346	3442	3462	8726;8727	8726					-0.013039934875791914
GDPLHQELA	9	Unmodified	_GDPLHQELA_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2464477419853	2	490.245806	978.47706	0.88081	0.00043181	1.406	0.00068927	2.2868	0.0011211	490.24670690988074	20.126	0.51726	21.252	20.956	21.473	1.1254					25	16	2	0	0	0	0.17276	3	8373	8327;8373;8428		36.127	5.9022	1	1110700	+		6989	10346	3442	3462	8728;8729;8730	8729					-0.013039934875791914
GDPLHQELA	9	Unmodified	_GDPLHQELA_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	489.5249206423759	2	490.245806	978.47706	0.48593	0.00023822	0.0025157	1.2333E-06	0.48844	0.00023946	490.24586254884605	19.626	0.36728	21.15	20.981	21.348	1.5237					21	11	2	0	0	0	0.11553	1	8151	8151		13.042	0	1	1153600	+		6990	10346	3442	3462	8731	8731					-0.013039934875791914
GDQIDFTLI	9	Unmodified	_GDQIDFTLI_					0	0	0			REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1021.520922839642	1	1021.52005	1020.51278	1.7113	0.0017482	-1.3001	-0.001328	0.41127	0.00042013	1021.5184840855139	67.119	0.42514	67.119	66.893	67.318	0					31	13	3	0	0	0	0.024001	1	27947	27947		96.111	3.6195	1	5326500	+		6991	15118	3443	3463	8732	8732					0.0033404396945115877
GDQIDFTLI	9	Unmodified	_GDQIDFTLI_					0	0	0			REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.522631824017	1	1021.52005	1020.51278	1.8495	0.0018893	-1.2643	-0.0012916	0.5851	0.0005977	1021.5206034024511	65.62	0.70026	67.019	66.788	67.488	1.3989					72	22	5	0	0	0	0.010279	4	27521	27474;27521;27560;27599		107.19	3.6195	1	25848000	+		6992	15118	3443	3463	8733;8734;8735;8736	8734					0.0033404396945115877
GDQIDFTLI	9	Unmodified	_GDQIDFTLI_					0	0	0			REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	REV__tr|A0A553SQ15|A0A553SQ15_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1021.522692859173	1	1021.52005	1020.51278	1.8958	0.0019366	-1.1884	-0.0012139	0.7074	0.00072262	1021.5204611584461	65.263	0.68372	67.171	66.876	67.559	1.9085					65	21	4	0	0	0	0.024001	2	27315	27315;27363		96.111	3.6195	1	25487000	+		6993	15118	3443	3463	8737;8738	8737					0.0033404396945115877
GDQSYQEST	9	Unmodified	_GDQSYQEST_					0	0	0			REV__ENST00000325307.11_1_X:150151769-150154077:+|nuORF	REV__ENST00000325307.11_1_X:150151769-150154077:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.1769897341728	3	338.805204	1013.39378	0.095499	3.2356E-05	2.5289	0.00085682	2.6244	0.00088918	339.14095258445735	20.256	0.18952	20.467	20.345	20.535	0.21024					7	5	2	0	0	0	0.11938	1	8380	8380		1.1933	0.9575	1	67912	+		6994	12426	3444	3464	8739	8739					-0.11237774726089356
GDRGSNPL	8	Unmodified	_GDRGSNPL_					0	0	0		ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant;ARHGEF17|p.G1624Rfs*4|1|0.4|ENSG00000110237|chr11:73362607-73362608|-/A|frameshift_variant;ENSG00000110237|ENST00000263674|ARHGEF17	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2049133181572	2	408.203941	814.39333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.71	1	119.88	119.38	120.38	0.16584								0	0	0	1.0178	1	51643	51643		0.79363	0	1				6995	75	3445	3465	8740	8740					-0.02129104864616238
GDRHTLRV	8	Unmodified	_GDRHTLRV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	477.2694274783134	2	477.267407	952.520262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.61	1	104.78	104.28	105.28	0.1731								0	0	0	1.0178	1	44298	44298		2.3027	0	1				6996	3425;7900	3446	3466	8741	8741					0.04210241080386368
GDRILAIN	8	Unmodified	_GDRILAIN_					0	0	0		nc|ENSG00000144596|Q9C0E4-2|GRIP2;ENSG00000144596|ENST00000621039|GRIP2;nc|ENSG00000155974|Q9Y3R0-3|GRIP1;nc|ENSG00000155974|Q9Y3R0-2|GRIP1;ENSG00000155974|ENST00000359742|GRIP1	nc|ENSG00000144596|Q9C0E4-2|GRIP2	nc|ENSG00000144596|Q9C0E4-2|GRIP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.2550536990166	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.796	1	98.024	97.524	98.524	0.22776								0	0	0	1.0178	1	41158	41158		4.756	0	1				6997	3085	3447	3467	8742	8742					0.05188918100270712
GDRLRPLR	8	Unmodified	_GDRLRPLR_					0	0	0			REV__ENST00000439321.1_1_2:122407632-122408176:+|nuORF	REV__ENST00000439321.1_1_2:122407632-122408176:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2003356814384	3	328.201675	981.583196	-2.2769	-0.00074729	-2.5238	-0.00082831	-4.8007	-0.0015756	328.2009171283455	33.87	1.2629	33.87	33.638	34.901	0					105	40	5	0	0	0	0.88896	1	14194	14194		3.2813	0	1	82373000	+		6998	13075	3448	3468	8743	8743					0.09166806868404365
GDRSGGGSHR	10	Unmodified	_GDRSGGGSHR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1573364138603	3	329.156794	984.448553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.761	1	39.046	38.546	39.546	1.284								0	0	0	0.6623	1	15852	15852		0.56317	0.10483	1		+		6999	9151	3449	3469	8744	8744					-0.044292983441323486
GDRSGGGSHR	10	Unmodified	_GDRSGGGSHR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MSMS	GG20161007_CRH_Patient100_W632_02	4	329.1576110720634	3	329.156794	984.448553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.028	1	38.845	38.345	39.345	1.8176								0	0	0	0.6623	1	15537	15537		0.56317	0.10483	1		+		7000	9151	3449	3469	8745	8745					-0.044292983441323486
GDRSGGGSHR	10	Unmodified	_GDRSGGGSHR_					0	0	0			REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	REV__nc|ENSG00000104859|Q8N2M8-3|CLASRP	MSMS	GG20161007_CRH_Patient100_W632_02	4	329.1575500369072	3	329.156794	984.448553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.144	1	38.964	38.464	39.464	1.8202								0	0	0	0.6623	1	15585	15585		0.56317	0.10483	1		+		7001	9151	3449	3469	8746	8746					-0.044292983441323486
GDRVPNGI	8	Unmodified	_GDRVPNGI_					0	0	0		nc|ENSG00000169635|Q96JB3-2|HIC2;ENSG00000169635|ENST00000407464|HIC2	nc|ENSG00000169635|Q96JB3-2|HIC2	nc|ENSG00000169635|Q96JB3-2|HIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	827.4413940310478	1	827.436992	826.429715	2.99	0.0024741	0.78678	0.00065101	3.7768	0.0031251	827.4377955525833	104.62	0.30543	104.8	104.58	104.88	0.1731					27	15	2	0	0	0	0.88663	1	44324	44324		4.756	0	1	22791000			7002	4102	3450	3470	8747	8747					0.009557720321026864
GDRWEVGRPG	10	Unmodified	_GDRWEVGRPG_					0	0	0		ENST00000422760.1_1_7:117824319-117824580:+|nuORF	ENST00000422760.1_1_7:117824319-117824580:+|nuORF	ENST00000422760.1_1_7:117824319-117824580:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.7840453982353	2	564.780879	1127.5472	2.2726	0.0012835	1.2482	0.00070494	3.5208	0.0019885	564.7821035701193	86.234	0.41867	86.234	86.008	86.427	0					52	13	5	0	0	0	0.8882	1	35880	35880		2.7352	0.43246	1	7924400			7003	6453	3451	3471	8748	8748					-0.011466950990779878
GDSDYDSC	8	Unmodified	_GDSDYDSC_					0	0	0			REV__ENST00000483495.5_1_20:34218821-34220289:-|nuORF	REV__ENST00000483495.5_1_20:34218821-34220289:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	431.1355163455009	2	431.13199	860.249427	3.2561	0.0014038	1.903	0.00082043	5.1591	0.0022243	431.1341743951395	101.98	0.11992	102.15	102.08	102.2	0.17032					11	3	4	0	0	0	0.89178	1	42922	42922		0.69038	0	1	6223000	+		7004	11849	3452	3472	8749	8749					-0.1862873947773096
GDSDYGGV	8	Unmodified	_GDSDYGGV_					0	0	0		ENST00000471727.3_1_2:68758519-68795411:+|nuORF;ENST00000445692.5_1_2:68762461-68805151:+|nuORF;ENST00000529851.5_1_2:68740776-68805151:+|nuORF;ENSG00000169621|ENST00000303795|APLF	ENST00000471727.3_1_2:68758519-68795411:+|nuORF	ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1527892947197	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.487	1	97.772	97.272	98.272	0.28442								0	0	0	1.0178	1	41023	41023		0.79363	0.79363	1				7005	4101	3453	3473	8750	8750					-0.10080181638124941
GEAVANILETK	11	Unmodified	_GEAVANILETK_					0	0	0			REV__tr|A0A553SRQ2|A0A553SRQ2_NIACIHUfamilyDNA-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_01475PE=3SV=1	REV__tr|A0A553SRQ2|A0A553SRQ2_NIACIHUfamilyDNA-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_01475PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	572.8160888552666	2	572.814053	1143.61355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.909	1	40.205	39.705	40.705	1.2961								0	0	0	0.63769	1	16324	16324		13.615	1.3742	1		+		7006	15169	3454	3474	8751	8751					0.047490759522816006
GEECKYSNER	10	Unmodified	_GEECKYSNER_					0	0	0			REV__nc|ENSG00000160321|O43345-2|ZNF208	REV__nc|ENSG00000160321|O43345-2|ZNF208	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1783630251884	3	405.508393	1213.50335	0.21654	8.7807E-05	-3.4753	-0.0014093	-3.2588	-0.0013215	405.8418140044083	32.702	0.19883	33.98	33.856	34.055	1.2782					12	6	3	0	0	0	0.12558	1	13702	13702		1.4551	1.2958	1	540980	+		7007	10601	3455	3475	8752	8752					-0.09486092378415378
GEECKYSNER	10	Unmodified	_GEECKYSNER_					0	0	0			REV__nc|ENSG00000160321|O43345-2|ZNF208	REV__nc|ENSG00000160321|O43345-2|ZNF208	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	405.508393	1213.50335	0.73843	0.00029944	-2.1054	-0.00085374	-1.3669	-0.00055431	405.8419070989251	32.145	0.15236	33.969	33.91	34.063	1.8246	-0.0051876	0.00098188	NaN	1.4551	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	336240	+		7008	10601	3455	3475							-0.09486092378415378
GEEEEKSDYK	10	Unmodified	_GEEEEKSDYK_					0	0	0		ENST00000341776.6_1_6:15246617-15246680:+|nuORF	ENST00000341776.6_1_6:15246617-15246680:+|nuORF	ENST00000341776.6_1_6:15246617-15246680:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1786071658134	3	405.178819	1212.51463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.211	1	18.211	17.711	18.711	0								0	0	0	0.66052	1	7565	7565		3.5871	0.85186	1				7009	5936	3456	3476	8753	8753					-0.0831299180329097
GEEFEDNFDK	10	Unmodified	_GEEFEDNFDK_					0	0	0		tr|A0A7D6ZHJ0|A0A7D6ZHJ0_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03175PE=3SV=1	tr|A0A7D6ZHJ0|A0A7D6ZHJ0_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03175PE=3SV=1	tr|A0A7D6ZHJ0|A0A7D6ZHJ0_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03175PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	614.9999267458916	2	615.251482	1228.48841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.446	1	19.426	18.926	19.926	0.97922								0	0	0	0.66052	1	7681	7681		3.5965	0	1				7010	17087	3457	3477	8754	8754					-0.116692609747588
GEEKYLWYK	9	Unmodified	_GEEKYLWYK_					0	0	0			REV__ENSG00000126870|ENST00000407559|DYNC2I1	REV__ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1788818240166	3	405.873001	1214.59717	0.16583	6.7304E-05	-0.42763	-0.00017356	-0.2618	-0.00010626	405.8729657176629	16.469	0.24179	17.508	17.374	17.615	1.0392					16	7	3	0	0	0	0.11837	1	6785	6785		4.897	1.31	1	1147900	+		7011	9705	3458	3478	8755	8755					-0.0015400521381252474
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1786682009697	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2785	1	3.2785	2.7785	3.7785	0								0	0	0	1.0178	1	1345	1345		2.5775	0	1				7012	5343	3459	3479	8756	8756					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1795532107353	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7369	1	3.7369	3.2369	4.2369	0								0	0	0	1.0178	1	1535	1535		2.5775	0	1				7013	5343	3459	3479	8757	8757					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1797057986259	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8536	1	3.8536	3.3536	4.3536	0								0	0	0	1.0178	1	1583	1583		2.5775	0	1				7014	5343	3459	3479	8758	8758					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1784240603447	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1658	1	4.1658	3.6658	4.6658	0								0	0	0	1.0178	1	1713	1713		0.69038	0	1				7015	5343	3459	3479	8759	8759					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1788818240166	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.512	1	9.512	9.012	10.012	0								0	0	0	1.0178	1	3916	3916		2.5775	0	1				7016	5343	3459	3479	8760	8760					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1814453005791	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.018	1	40.018	39.518	40.518	0								0	0	0	1.0178	1	16770	16770		2.5775	0	1				7017	5343	3459	3479	8761	8761					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1797057986259	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.142	1	40.142	39.642	40.642	0								0	0	0	1.0178	1	16820	16820		2.5775	0	1				7018	5343	3459	3479	8762	8762					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1795532107353	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.498	1	72.498	71.998	72.998	0								0	0	0	1.0178	1	30186	30186		2.5775	0	1				7019	5343	3459	3479	8763	8763					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1786987185478	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.068	1	73.068	72.568	73.568	0								0	0	0	1.0178	1	30421	30421		2.5775	0	1				7020	5343	3459	3479	8764	8764					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1793090701103	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.231	1	73.231	72.731	73.731	0								0	0	0	1.0178	1	30488	30488		2.5775	0	1				7021	5343	3459	3479	8765	8765					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1793090701103	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.004	1	75.004	74.504	75.504	0								0	0	0	1.0178	1	31227	31227		2.5775	0	1				7022	5343	3459	3479	8766	8766					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1821777224541	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.71	1	79.71	79.21	80.21	0								0	0	0	1.0178	1	33189	33189		2.5775	0	1				7023	5343	3459	3479	8767	8767					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1781494021416	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.9	1	88.9	88.4	89.4	0								0	0	0	1.0178	1	37165	37165		2.5775	0	1				7024	5343	3459	3479	8768	8768					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1792480349541	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.188	1	89.188	88.688	89.688	0								0	0	0	1.0178	1	37283	37283		2.5775	0	1				7025	5343	3459	3479	8769	8769					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1801025271416	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.383	1	89.383	88.883	89.883	0								0	0	0	1.0178	1	37362	37362		2.5775	0	1				7026	5343	3459	3479	8770	8770					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1817809939384	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.799	1	94.799	94.299	95.299	0								0	0	0	1.0178	1	39620	39620		2.5775	0	1				7027	5343	3459	3479	8771	8771					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1784240603447	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8835	1	3.0061	2.5061	3.5061	0.12256								0	0	0	1.0178	1	1190	1190		0.69038	0	1				7028	5343	3459	3479	8772	8772					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1797363162041	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.348	1	16.478	15.978	16.978	0.13022								0	0	0	1.0178	1	6785	6785		2.5775	0	1				7029	5343	3459	3479	8773	8773					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1795226931572	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.275	1	34.572	34.072	35.072	0.29701								0	0	0	1.0178	1	14393	14393		2.5775	0	1				7030	5343	3459	3479	8774	8774					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1797057986259	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.592	1	34.892	34.392	35.392	0.29942								0	0	0	1.0178	1	14529	14529		2.5775	0	1				7031	5343	3459	3479	8775	8775					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1793090701103	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.689	1	43.01	42.51	43.51	0.32058								0	0	0	1.0178	1	17930	17930		2.5775	0	1				7032	5343	3459	3479	8776	8776					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1791869997978	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.536	1	47.867	47.367	48.367	0.33034								0	0	0	1.0178	1	19940	19940		2.5775	0	1				7033	5343	3459	3479	8777	8777					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1791259646416	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.841	1	48.171	47.671	48.671	0.33034								0	0	0	1.0178	1	20066	20066		2.5775	0	1				7034	5343	3459	3479	8778	8778					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1790038943291	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.471	1	63.8	63.3	64.3	0.32899								0	0	0	1.0178	1	26589	26589		2.5775	0	1				7035	5343	3459	3479	8779	8779					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1794006228447	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.349	1	69.671	69.171	70.171	0.32224								0	0	0	1.0178	1	29027	29027		2.5775	0	1				7036	5343	3459	3479	8780	8780					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1777831912041	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.564	1	71.888	71.388	72.388	0.32359								0	0	0	1.0178	1	29947	29947		2.5775	0	1				7037	5343	3459	3479	8781	8781					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1790649294853	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.292	1	72.617	72.117	73.117	0.32494								0	0	0	1.0178	1	30246	30246		2.5775	0	1				7038	5343	3459	3479	8782	8782					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1791259646416	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.729	1	73.054	72.554	73.554	0.32494								0	0	0	1.0178	1	30427	30427		2.5775	0	1				7039	5343	3459	3479	8783	8783					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1789428591728	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.056	1	78.365	77.865	78.865	0.30933								0	0	0	1.0178	1	32637	32637		2.5775	0	1				7040	5343	3459	3479	8784	8784					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1792480349541	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.431	1	80.721	80.221	81.221	0.29056								0	0	0	1.0178	1	33624	33624		2.5775	0	1				7041	5343	3459	3479	8785	8785					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1794616580009	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.167	1	93.336	92.836	93.836	0.16835								0	0	0	1.0178	1	39007	39007		2.5775	0	1				7042	5343	3459	3479	8786	8786					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1791564822197	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.468	1	15.237	14.737	15.737	0.76937								0	0	0	1.0178	1	6014	6014		2.5775	0	1				7043	5343	3459	3479	8787	8787					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1785156130791	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.011	1	15.78	15.28	16.28	0.76937								0	0	0	1.0178	1	6238	6238		2.5775	0	1				7044	5343	3459	3479	8788	8788					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1783935427666	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.226	1	16.034	15.534	16.534	0.8083								0	0	0	1.0178	1	6326	6326		2.5775	0	1				7045	5343	3459	3479	8789	8789					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1776306033134	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.357	1	18.255	17.755	18.755	0.89794								0	0	0	1.0178	1	7224	7224		2.5775	0	1				7046	5343	3459	3479	8790	8790					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1783019900322	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.707	1	42.032	41.532	42.532	1.3254								0	0	0	1.0178	1	17072	17072		2.5775	0	1				7047	5343	3459	3479	8791	8791					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1803771853447	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.906	1	89.962	89.462	90.462	1.0562								0	0	0	1.0178	1	37475	37475		2.5775	0	1				7048	5343	3459	3479	8792	8792					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1797668337822	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4874	1	5.2238	4.7238	5.7238	0.73642								0	0	0	1.0178	1	1859	1859		0.69038	0	1				7049	5343	3459	3479	8793	8793					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1798889040947	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.827	1	45.771	45.271	46.271	1.9438								0	0	0	1.0178	1	18376	18376		2.5775	0	1				7050	5343	3459	3479	8794	8794					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1783630251884	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.276	1	47.235	46.735	47.735	1.9596								0	0	0	1.0178	1	18971	18971		2.5775	0	1				7051	5343	3459	3479	8795	8795					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1797973513603	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.294	1	89.74	89.24	90.24	1.4467								0	0	0	1.0178	1	37212	37212		2.5775	0	1				7052	5343	3459	3479	8796	8796					-0.066796432951719
GEESSTSL	8	Unmodified	_GEESSTSL_					0	0	0		nc|ENSG00000243130|Q9UQ72-2|PSG11;ENST00000594655.5_1_19:43519232-43530590:-|nuORF;ENSG00000243130|ENST00000320078|PSG11;ENSG00000242221|ENST00000406487|PSG2;ENST00000595138.1_1_19:43519232-43530599:-|nuORF	nc|ENSG00000243130|Q9UQ72-2|PSG11	nc|ENSG00000243130|Q9UQ72-2|PSG11	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1796447634697	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.802	1	93.129	92.629	93.629	1.3269								0	0	0	1.0178	1	38654	38654		2.5775	0	1				7053	5343	3459	3479	8797	8797					-0.066796432951719
GEEVLRQL	8	Unmodified	_GEEVLRQL_					0	0	0		ENSG00000105223|ENST00000409735|PLD3	ENSG00000105223|ENST00000409735|PLD3	ENSG00000105223|ENST00000409735|PLD3	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1773864626884	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.49	1	118.65	118.15	119.15	0.16237								0	0	0	1.0178	1	51151	51151		1.6526	0	1				7054	1504	3460	3480	8798	8798					0.03988883409135724
GEEVLRQL	8	Unmodified	_GEEVLRQL_					0	0	0		ENSG00000105223|ENST00000409735|PLD3	ENSG00000105223|ENST00000409735|PLD3	ENSG00000105223|ENST00000409735|PLD3	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1776916384697	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.92	1	119.09	118.59	119.59	0.16237								0	0	0	1.0178	1	51328	51328		0.40072	0	1				7055	1504	3460	3480	8799	8799					0.03988883409135724
GEEVRRVL	8	Unmodified	_GEEVRRVL_					0	0	0		ENSG00000160999|ENST00000444095|SH2B2;nc|ENSG00000160999|O14492-2|SH2B2	ENSG00000160999|ENST00000444095|SH2B2	ENSG00000160999|ENST00000444095|SH2B2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2782470583916	2	479.277441	956.540328	2.0216	0.00096893	0.5682	0.00027233	2.5898	0.0012413	479.27747670918086	66.294	1.2487	66.294	65.774	67.022	0					47	38	2	0	0	0	0.89008	1	27617	27617		2.5775	0	1	693850			7056	3585	3461	3481	8800	8800					0.06031992020336929
GEGLDNPIVF	10	Unmodified	_GEGLDNPIVF_					0	0	0			REV__tr|A0A553SRU3|A0A553SRU3_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01840PE=4SV=1	REV__tr|A0A553SRU3|A0A553SRU3_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01840PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1060.533374011517	1	1060.53095	1059.52368	3.3469	0.0035495	-0.97401	-0.001033	2.3729	0.0025166	1060.5288151212176	70.985	0.24102	72.326	72.179	72.42	1.3415					11	7	2	0	0	0	0.49886	1	29781	29781		27.629	6.0918	1	1244900	+		7057	15173	3462	3482	8801	8801					-0.0037055365628475556
GEHSSDSNS	9	Unmodified	_GEHSSDSNS_					0	0	0			REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MSMS	GG20161007_CRH_Patient100_A02_01	1	307.1157409548759	3	307.117782	918.331517	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.655	1	32.655	32.155	33.155	0								0	0	0	0.42693	1	13682	13682		0.26902	0.1097	1		+		7058	8685	3463	3483	8802	8802					-0.13091501074404732
GEILDEIAKRV	11	Unmodified	_GEILDEIAKRV_					0	0	0			REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8605834841728	2	621.856252	1241.69795	2.2052	0.0013713	0.79094	0.00049185	2.9961	0.0018631	621.8573619659605	47.383	0.21837	49.359	49.217	49.435	1.976					12	6	2	0	0	0	0.50855	1	19852	19852		23.79	4.4278	1	939690	+		7059	11709	3464	3484	8803	8803					0.08677026769009899
GEILDEIAKRV	11	Unmodified	_GEILDEIAKRV_					0	0	0			REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	REV__nc|ENSG00000198369|Q7Z698-2|SPRED2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	621.856252	1241.69795	2.2052	0.0013713	0.79094	0.00049185	2.9961	0.0018631	621.8573619659605	47.383	0.21837	49.359	49.217	49.435	1.976	0.083684	0.00096972	NaN	23.79	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	939690	+		7060	11709	3464	3484							0.08677026769009899
GEIVDFVVI	9	Unmodified	_GEIVDFVVI_					0	0	0		tr|A0A553SHK4|A0A553SHK4_NIACILysMpeptidoglycan-bindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13095PE=4SV=1	tr|A0A553SHK4|A0A553SHK4_NIACILysMpeptidoglycan-bindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13095PE=4SV=1	tr|A0A553SHK4|A0A553SHK4_NIACILysMpeptidoglycan-bindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.5540038943291	1	990.550625	989.543348	1.6728	0.001657	1.4445	0.0014308	3.1173	0.0030878	990.5523372759958	80.112	0.36502	81.829	81.631	81.996	1.7167					28	11	3	0	0	0	0.19075	1	33653	33653		34.102	5.6156	1	3517500			7061	16156	3465	3485	8804	8804					0.04815822354487409
GELLCPSPSL	10	Unmodified	_GELLCPSPSL_					0	0	0		PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant;PLXNA3|p.L1776Rfs*78|1|0.25|ENSG00000130827|chrX:154471271-154471275|CTGCT/-|frameshift_variant;ENSG00000130827|ENST00000369682|PLXNA3	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.7906066775322	2	508.260068	1014.50558	1.641	0.00083407	-4.3234	-0.0021974	-2.6824	-0.0013633	508.2576870612586	54.006	0.34496	55.975	55.751	56.096	1.9689					16	10	2	0	0	0	0.12425	1	22557	22557		19.257	2.3147	1	1302000			7062	2466	3466	3486	8805	8805					-0.0010901190264576144
GELRLRVRRVL	11	Unmodified	_GELRLRVRRVL_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000513935.1_1_4:906456-925975:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2994872927666	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.45	1	103.61	103.11	104.11	0.16445								0	0	0	0.63775	1	43609	43609		0.40827	0.31342	1				7063	4496	3467	3487	8806	8806					0.19978607281973382
GELWAVEIPV	10	Unmodified	_GELWAVEIPV_					0	0	0		ENST00000446230.6_1_11:94340607-94341374:+|nuORF;ENST00000543336.5_1_11:94340616-94349694:+|nuORF	ENST00000446230.6_1_11:94340607-94341374:+|nuORF	ENST00000446230.6_1_11:94340607-94341374:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8051025271416	2	556.802957	1111.59136	0.87747	0.00048858	3.5895	0.0019986	4.467	0.0024872	556.8047271870238	38.04	0.36672	39.86	39.701	40.068	1.8202					23	11	3	0	0	0	0.77604	1	15957	15957		14.838	1.3304	1	2172900			7064	6583	3468	3488	8807	8807					0.04002896274505474
GENDRWRFYWK	11	Unmodified	_GENDRWRFYWK_					0	0	0		ENSG00000206579|ENST00000327381|XKR4	ENSG00000206579|ENST00000327381|XKR4	ENSG00000206579|ENST00000327381|XKR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.9397155642509	4	389.940288	1555.73205	-1.2071	-0.00047068	-0.18938	-7.3846E-05	-1.3964	-0.00054453	389.9402042887503	15.264	0.34408	15.264	15.092	15.436	0					31	10	4	0	0	0	1.039	1	6364	6364		0.45452	0	1	8144300			7065	5200	3469	3489	8808	8808					-0.023591320193645515
GENPTLFVHFY	11	Unmodified	_GENPTLFVHFY_					0	0	0		ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.3259765505791	2	662.322045	1322.62954	4.0303	0.0026693	2.0912	0.0013851	6.1215	0.0040544	662.3229370569844	87.142	0.5764	88.234	88.006	88.583	1.0918					47	18	4	0	0	0	0.50855	2	36732	36732;36780		23.79	6.6769	1	2757200			7066	4869	3470	3490	8809;8810	8809					-0.018872178108040316
GENPTLFVHFY	11	Unmodified	_GENPTLFVHFY_					0	0	0		ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	662.3248168826103	2	662.322045	1322.62954	4.3508	0.0028816	1.6962	0.0011234	6.047	0.004005	662.3223065253952	86.771	0.54261	88.266	88.038	88.581	1.4953					47	17	4	0	0	0	0.50855	1	36587	36587		23.79	0.64136	1	3048500			7067	4869	3470	3490	8811	8811					-0.018872178108040316
GEPCDKVCT	9	Unmodified	_GEPCDKVCT_					0	0	0			REV__nc|ENSG00000099139|Q92824|PCSK5	REV__nc|ENSG00000099139|Q92824|PCSK5	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1985351443291	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.806	1	19.254	18.754	19.754	1.448								0	0	0	0.40883	1	7397	7397		7.9102	0	1		+		7068	8942	3471	3491	8812	8812					-0.09342377256666623
GEQCQEDCGC	10	Unmodified	_GEQCQEDCGC_					0	0	0		ENSG00000010327|ENST00000321725|STAB1;STAB1|p.G1393Afs*11|1|0.46|ENSG00000010327|chr3:52516388-52516389|-/C|frameshift_variant	ENSG00000010327|ENST00000321725|STAB1	ENSG00000010327|ENST00000321725|STAB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1611816287041	2	536.162441	1070.31033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.148	1	40.444	39.944	40.944	1.2961								0	0	0	0.66237	1	16425	16425		0.45834	0	1				7069	553	3472	3492	8813	8813					-0.22201293761440866
GERYFVKK	8	Unmodified	_GERYFVKK_					0	0	0			REV__ENST00000464601.5_1_3:182733228-182740387:-|nuORF	REV__ENST00000464601.5_1_3:182733228-182740387:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7928954958916	2	513.790184	1025.56581	1.5027	0.00077207	2.5966	0.0013341	4.0993	0.0021062	513.7919052079332	29.898	0.27537	29.898	29.732	30.008	0					20	8	3	0	0	0	0.88896	1	12490	12490		2.0598	0	1	1465200	+		7070	8785	3473	3493	8814	8814					0.05405466542742943
GERYLSTAL	9	Unmodified	_GERYLSTAL_					0	0	0		tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2704650759697	2	505.269281	1008.52401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.337	1	99.417	98.917	99.917	0.080376								0	0	0	0.42693	1	41590	41590		1.8442	0	1				7071	16147	3474	3494	8815	8815					0.020088660635565248
GEYTLYHFV	9	Unmodified	_GEYTLYHFV_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7733032107353	2	564.771657	1127.52876	2.5958	0.001466	0.075075	4.24E-05	2.6709	0.0015084	564.7717696963601	75.445	0.3714	76.752	76.615	76.987	1.3063					31	11	3	0	0	0	0.34572	1	31725	31725		23.148	0	1	3593600	+		7072	11078	3475	3495	8816	8816					-0.02990249793674593
GFAMLPRLV	9	Unmodified	_GFAMLPRLV_					0	0	0		nc|ENSG00000164867|P29474-3|NOS3;chr17:41771862-41778303|112|22.95|0.57|5.34|-|0|TE_info:AluJb,AluJb_dup107684,Alu,SINE,donor,+,41778303,41778571|JUP,None|3;chr17:1845066-1853101|163|13.23|0.66|4.33|+|0|TE_info:AluSx,AluSx_dup95148,Alu,SINE,donor,-,1844955,1845066|None,RPA1|2;chr10:12187959-12195770|134|17.72|0.64|4.8|-|0|None,NUDT5|1;chr3:32395282-32441840|353|18.42|0.66|4.8|+|0|TE_info:AluJo,AluJo_dup12958,Alu,SINE,donor,-,32395003,32395282|None,CMTM7|2	nc|ENSG00000164867|P29474-3|NOS3	nc|ENSG00000164867|P29474-3|NOS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2928649783134	2	502.291505	1002.56846	1.0057	0.00050517	1.3344	0.00067027	2.3402	0.0011754	502.2917166696367	67.29	0.33446	69.16	69.059	69.394	1.87					28	10	4	0	0	0	0.3154	2	28232	28232;28282		24.674	2.9272	1	3094900			7073	7912	3476	3496	8817;8818	8817					0.06727598676047819
GFDPGMVRKI	10	Unmodified	_GFDPGMVRKI_					0	0	0			REV__ENSG00000159339|ENST00000375448|PADI4	REV__ENSG00000159339|ENST00000375448|PADI4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3027221560478	2	560.302601	1118.59065	0.7554	0.00042325	-0.11084	-6.2103E-05	0.64456	0.00036115	560.3023296480809	108.52	0.22059	108.52	108.38	108.6	0					34	9	4	0	0	0	0.88022	1	46789	46789		3.5965	1.5367	1	235340000	+		7074	10571	3477	3497	8819	8819					0.03609778353825277
GFEWQRTEGK	10	Unmodified	_GFEWQRTEGK_					0	0	0		nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2062255740166	3	413.203522	1236.58874	-0.631	-0.00026073	3.0188	0.0012474	2.3878	0.00098666	413.2051459536378	13.372	0.46359	13.372	13.146	13.61	0					22	14	2	0	0	0	0.86043	1	5580	5580		3.0723	1.1659	1	608100			7075	7819	3478	3498	8820	8820					-0.020095591304425398
GFEWQRTEGK	10	Unmodified	_GFEWQRTEGK_					0	0	0		nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	413.203522	1236.58874	-0.38355	-0.00015848	3.8117	0.001575	3.4282	0.0014165	413.53966714985546	12.684	0.21426	13.378	13.227	13.441	0.69396	0.0029276	0.00060974	NaN	3.0723	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137040			7076	7819	3478	3498							-0.020095591304425398
GFGIRRIRD	9	Unmodified	_GFGIRRIRD_					0	0	0			REV__TLL1|p.T303Pfs*30|1|0.05|ENSG00000038295|chr4:166008038-166008038|A/-|frameshift_variant	REV__TLL1|p.T303Pfs*30|1|0.05|ENSG00000038295|chr4:166008038-166008038|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3185302615166	2	545.317432	1088.62031	2.6528	0.0014466	1.0129	0.00055236	3.6657	0.001999	545.3181644205041	72.657	1.0403	74.467	74.137	75.177	1.8101					78	32	4	0	0	0	0.82604	1	30468	30468		2.3027	0	1	1739100	+		7077	8587	3479	3499	8821	8821					0.07954478414194455
GFIQDKITV	9	Unmodified	_GFIQDKITV_					0	0	0		ENST00000508694.1_1_5:95249445-95255192:-|nuORF;ENST00000413990.1_1_1:158146977-158147493:-|nuORF;nc|ENSG00000118985|O00472-2|ELL2;ENSG00000118985|ENST00000237853|ELL2	ENST00000508694.1_1_5:95249445-95255192:-|nuORF	ENST00000508694.1_1_5:95249445-95255192:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.7914916872978	2	510.78985	1019.56515	1.8647	0.00095246	1.2457	0.00063627	3.1104	0.0015887	510.7903672579509	51.505	0.31118	51.831	51.663	51.975	0.32553					21	9	3	0	0	0	0.12251	1	21596	21596		41.84	5.7126	1	2340100			7078	2054	3480	3500	8822	8822					0.05614627103034309
GFLGKRKP	8	Unmodified	_GFLGKRKP_					0	0	0		ENSG00000153930|ENST00000682825|ANKFN1	ENSG00000153930|ENST00000682825|ANKFN1	ENSG00000153930|ENST00000682825|ANKFN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.7819396853447	2	451.782162	901.549771	2.1958	0.00099202	-3.3565	-0.0015164	-1.1607	-0.00052438	451.7806120564948	67.995	0.50943	68.318	68.057	68.566	0.32269					28	15	2	0	0	0	0.89008	1	28460	28460		2.5775	0	1	1161000			7079	3370	3481	3501	8823	8823					0.09505805096500808
GFNQLYKIPF	10	Unmodified	_GFNQLYKIPF_					0	0	0			REV__ENST00000309922.6_1_3:101284860-101285061:+|nuORF	REV__ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.8309814333916	2	613.832049	1225.64954	4.5874	0.0028159	-3.8682	-0.0023745	0.71918	0.00044145	613.8283008536464	87.828	0.38242	89.314	89.1	89.483	1.4857					25	11	3	0	0	0	0.65574	1	37002	37002		20.454	2.3186	1	3833300	+		7080	12355	3482	3502	8824	8824					0.045745779197886804
GFNQLYKIPF	10	Unmodified	_GFNQLYKIPF_					0	0	0			REV__ENST00000309922.6_1_3:101284860-101285061:+|nuORF	REV__ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	613.3670532107353	2	613.832049	1225.64954	4.5874	0.0028159	-3.8682	-0.0023745	0.71918	0.00044145	613.8283008536464	87.828	0.38242	89.314	89.1	89.483	1.4857					25	11	3	0	0	0	0.12493	1	36952	36952		6.7232	0	1	3833300	+		7081	12355	3482	3502	8825	8825					0.045745779197886804
GFQFFALPPH	10	Unmodified	_GFQFFALPPH_					0	0	0		ENST00000481074.1_1_7:132938364-132938703:+|nuORF	ENST00000481074.1_1_7:132938364-132938703:+|nuORF	ENST00000481074.1_1_7:132938364-132938703:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7993652224541	2	580.798009	1159.58147	2.5152	0.0014608	-3.0237	-0.0017562	-0.50847	-0.00029532	580.7960676109942	44.987	0.28468	46.353	46.18	46.464	1.3653					19	8	3	0	0	0	0.846	1	18823	18823		7.2892	0	1	1311600			7082	6821	3483	3503	8826	8826					0.008057530597852747
GFQLDRQRR	9	Unmodified	_GFQLDRQRR_					0	0	0			REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	REV__ENST00000233535.8_1_2:27481772-27486087:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3217040896416	2	588.323245	1174.63194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.504	1	41.821	41.321	42.321	0.31683								0	0	0	0.42693	1	17433	17433		1.8442	0	1		+		7083	12107	3484	3504	8827	8827					0.05160675437491591
GFQNALIVR	9	Unmodified	_GFQNALIVR_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.2965881228447	2	509.295633	1016.57671	1.8617	0.00094816	-0.66269	-0.0003375	1.199	0.00061066	509.29509525681254	38.803	0.34534	38.803	38.639	38.984	0					30	13	3	0	0	0	0.0075027	2	16273	16232;16273		112.59	70.499	1	3009100		+	7084	341	3485	3505	8828;8829	8829					0.06908868917037125
GFQNALIVR	9	Unmodified	_GFQNALIVR_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.2957031130791	2	509.295633	1016.57671	1.7709	0.00090189	-0.7098	-0.0003615	1.0611	0.00054039	509.29519361143707	38.214	0.20646	38.523	38.41	38.617	0.30857					25	15	2	0	0	0	0.033794	2	16064	16064;16103		81.613	53.126	1	1709000		+	7085	341	3485	3505	8830;8831	8830					0.06908868917037125
GFQVTMIKGI	10	Unmodified	_GFQVTMIKGI_					0	0	0		tr|A0A553SNK2|A0A553SNK2_NIACIArylamineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_24670PE=3SV=1	tr|A0A553SNK2|A0A553SNK2_NIACIArylamineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_24670PE=3SV=1	tr|A0A553SNK2|A0A553SNK2_NIACIArylamineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_24670PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3062011599541	2	547.307352	1092.60015	1.0794	0.00059079	-1.4351	-0.00078542	-0.35563	-0.00019464	547.3066709814207	55.345	0.34804	56.755	56.56	56.908	1.4099					26	11	3	0	0	0	0.63205	1	23137	23137		21.537	0	1	3520900			7086	16425	3486	3506	8832	8832					0.0575554663935236
GFRELYLPSER	11	Unmodified	_GFRELYLPSER_					0	0	0			REV__ENSG00000182272|ENST00000329962|B4GALNT4	REV__ENSG00000182272|ENST00000329962|B4GALNT4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	456.8419372439384	3	456.241976	1365.7041	0.50748	0.00023153	-2.5339	-0.0011561	-2.0264	-0.00092452	456.24090911319445	11.279	0.37243	11.279	11.079	11.451	0					24	11	3	0	0	0	0.14606	1	4652	4652		1.9275	0	1	1791300	+		7087	11346	3487	3507	8833	8833					0.03587545000527825
GFRRERDFRRR	11	Unmodified	_GFRRERDFRRR_					0	0	0		ENST00000488868.1_1_1:28559432-28559522:-|nuORF	ENST00000488868.1_1_1:28559432-28559522:-|nuORF	ENST00000488868.1_1_1:28559432-28559522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.9579955935478	3	517.622296	1549.84506	0.53665	0.00027778	2.573	0.0013318	3.1096	0.0016096	517.9573221516464	51.415	0.51956	53.39	53.191	53.711	1.9753					27	18	2	0	0	0	1.0366	1	21507	21507		0.40827	0	1	2713600			7088	6891	3488	3508	8834	8834					0.09212981217160632
GFSGPECG	8	Unmodified	_GFSGPECG_					0	0	0			REV__ENSG00000162591|ENST00000356575|MEGF6	REV__ENSG00000162591|ENST00000356575|MEGF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.1484557986259	2	377.147246	752.27994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.105	1	87.349	86.849	87.849	0.24387								0	0	0	1.0178	1	36511	36511		2.5775	0	1		+		7089	10648	3489	3509	8835	8835					-0.10610916302016449
GFSGPECG	8	Unmodified	_GFSGPECG_					0	0	0			REV__ENSG00000162591|ENST00000356575|MEGF6	REV__ENSG00000162591|ENST00000356575|MEGF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.1489745974541	2	377.147246	752.27994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.223	1	87.467	86.967	87.967	0.24387								0	0	0	1.0178	1	36571	36571		2.5775	0	1		+		7090	10648	3489	3509	8836	8836					-0.10610916302016449
GFSGPECG	8	Unmodified	_GFSGPECG_					0	0	0			REV__ENSG00000162591|ENST00000356575|MEGF6	REV__ENSG00000162591|ENST00000356575|MEGF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.1508666872978	2	377.147246	752.27994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.28	1	88.775	88.275	89.275	1.4953								0	0	0	1.0178	1	36796	36796		2.5775	0	1		+		7091	10648	3489	3509	8837	8837					-0.10610916302016449
GFSMGGCM	8	Unmodified	_GFSMGGCM_					0	0	0		ENST00000477938.5_1_1:219352746-219385067:+|nuORF;ENST00000474379.5_1_1:219347271-219385067:+|nuORF;nc|ENSG00000143353|Q5VWZ2-2|LYPLAL1;ENSG00000143353|ENST00000366928|LYPLAL1;ENST00000463964.5_1_1:219347256-219385067:+|nuORF	ENST00000477938.5_1_1:219352746-219385067:+|nuORF	ENST00000477938.5_1_1:219352746-219385067:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	395.5054809451103	2	395.140052	788.265552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.775	1	55.175	54.675	55.675	1.4005								0	0	0	1.0178	1	22509	22509		0.79363	0.10326	1				7092	3026	3490	3510	8838	8838					-0.13705028046172174
GFSWCWDR	8	Unmodified	_GFSWCWDR_					0	0	0			REV__HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|160|3|anti-sense	REV__HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|160|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7217285037041	2	528.721444	1055.42834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.248	1	19.227	18.727	19.727	0.97922								0	0	0	1.0178	1	7598	7598		2.0598	0	1		+		7093	14203	3491	3511	8839	8839					-0.0971618532832963
GFWKLFHRF	9	Unmodified	_GFWKLFHRF_					0	0	0		UGP2|p.R59W|1|0.29|ENSG00000169764|chr2:63857856-63857856|C/T|missense_variant	UGP2|p.R59W|1|0.29|ENSG00000169764|chr2:63857856-63857856|C/T|missense_variant	UGP2|p.R59W|1|0.29|ENSG00000169764|chr2:63857856-63857856|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	619.3346435427666	2	619.335093	1236.65563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.907	1	94.779	94.279	95.279	0.87176								0	0	0	0.42693	1	39515	39515		2.3027	0.24298	1				7094	17349	3492	3512	8840	8840					0.04677140941953439
GFYPAEITLTW	11	Unmodified	_GFYPAEITLTW_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;nc|ENSG00000206503|P04439-2|HLA-A;ENSG00000204525|ENST00000376228|HLA-C;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000204525|P10321-2|HLA-C;ENST00000606273.3_1_6:29692860-29693788:+|nuORF;ENST00000495183.5_1_6:29910749-29913287:+|nuORF;nc|ENSG00000204642|P30511|HLA-F;HLA-F|p.D248Rfs*89|1|0.04|ENSG00000204642|chr6:29725161-29725162|-/A|frameshift_variant;ENST00000496081.5_1_6:29910330-29912419:+|nuORF;ENST00000487245.5_1_6:31236948-31239147:-|nuORF;ENST00000484704.5_1_6:29691969-29693843:+|nuORF;ENST00000470363.5_1_6:31237527-31238194:-|nuORF;ENST00000383620.4_1_6:29857122-29858256:+|nuORF;ENST00000494367.1_1_6:29976031-29977313:+|nuORF;ENSG00000204642|ENST00000259951|HLA-F;ENSG00000234745|ENST00000412585|HLA-B	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000234745|ENST00000412585|HLA-B	ENSG00000204592|ENST00000376630|HLA-E	MSMS	GG20161007_CRH_Patient100_W632_01	3	649.3336669802666	2	649.326796	1296.63904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.489	1	91.471	90.971	91.971	0.98157								0	0	0	0.63768	1	38124	38124		24.021	1.2843	1				7095	5151;5313	3493	3513	8841	8841					0.0025855047470031423
GGAARPIK	8	Unmodified	_GGAARPIK_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	769.4716674685478	1	769.467898	768.460622	2.7375	0.0021064	1.9282	0.0014837	4.6657	0.0035901	769.469229632149	107.52	0.32619	107.57	107.46	107.79	0.052452					48	16	5	0	0	0	0.89178	1	45978	45978		0.69038	0	1	449690000			7096	1490	3494	3514	8842	8842					0.0671297013699359
GGAARPIK	8	Unmodified	_GGAARPIK_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	769.4708129763603	1	769.467898	768.460622	2.5671	0.0019753	1.3642	0.0010497	3.9313	0.003025	769.4689122253675	107.51	0.2269	107.67	107.56	107.79	0.15781					35	11	5	0	0	0	0.89178	2	46240	46240;46305		0.69038	0	1	274240000			7097	1490	3494	3514	8843;8844	8843					0.0671297013699359
GGAARPIK	8	Unmodified	_GGAARPIK_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	769.4696533083916	1	769.467898	768.460622	2.7893	0.0021463	0.33986	0.00026151	3.1291	0.0024078	769.4679164904448	107.49	0.19666	107.65	107.52	107.72	0.15795					31	9	4	0	0	0	0.89178	1	46152	46152		0.69038	0	1	150300000			7098	1490	3494	3514	8845	8845					0.0671297013699359
GGAARPIK	8	Unmodified	_GGAARPIK_					0	0	0		ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	ENSG00000104903|ENST00000264824|LYL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	769.467898	768.460622	1.327	0.001021	3.009	0.0023153	4.3359	0.0033364	769.4701467046743	107.57	0.28702	107.57	107.45	107.74	0	-0.041163	0.001079	NaN	0.69038	45	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	562940000			7099	1490	3494	3514							0.0671297013699359
GGAGGKGM	8	Unmodified	_GGAGGKGM_					0	0	0		nc|ENSG00000137656|Q9BRD0-2|BUD13;ENSG00000137656|ENST00000260210|BUD13	nc|ENSG00000137656|Q9BRD0-2|BUD13	nc|ENSG00000137656|Q9BRD0-2|BUD13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	317.1957580447197	2	317.652499	633.290445	1.4445	0.00045886	-2.6651	-0.00084659	-1.2206	-0.00038773	317.65113478545544	40.408	0.53503	42.271	42.171	42.706	1.8624					25	16	2	0	0	0	2.3239	1	17016	17016		0.69038	0	1	675920			7100	2781	3495	3515	8846	8846					-0.0408688885694346
GGAHAAAW	8	Unmodified	_GGAHAAAW_					0	0	0		ENST00000490474.5_1_10:6268288-6274902:+|nuORF	ENST00000490474.5_1_10:6268288-6274902:+|nuORF	ENST00000490474.5_1_10:6268288-6274902:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	740.3486816287041	1	740.347449	739.340172	2.7191	0.0020131	-1.9862	-0.0014705	0.73291	0.00054261	740.3455023951528	102.19	0.10966	102.25	102.19	102.3	0.062805					5	3	2	0	0	0	0.89176	1	42800	42800		0.79363	0	1	4494800			7101	6904	3496	3516	8847	8847					-0.03992437856629749
GGAHAAAW	8	Unmodified	_GGAHAAAW_					0	0	0		ENST00000490474.5_1_10:6268288-6274902:+|nuORF	ENST00000490474.5_1_10:6268288-6274902:+|nuORF	ENST00000490474.5_1_10:6268288-6274902:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	740.347449	739.340172	1.3691	0.0010136	-2.2838	-0.0016908	-0.91468	-0.00067718	740.3454580129237	102.22	0.10849	102.22	102.18	102.29	0	-0.016603	-5.97E-05	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2443000			7102	6904	3496	3516							-0.03992437856629749
GGALTPVG	8	Unmodified	_GGALTPVG_					0	0	0			REV__ENST00000498461.1_1_10:45938876-45939636:+|nuORF	REV__ENST00000498461.1_1_10:45938876-45939636:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	336.1885253787041	2	336.189771	670.36499	-2.3122	-0.00077735	3.5286	0.0011863	1.2163	0.00040891	336.1906516214157	26.254	0.29955	26.254	26.117	26.417	0					23	9	3	0	0	0	0.89178	2	10948	10948;10995		0.69038	0	1	2588100	+		7103	13491	3497	3517	8848;8849	8848					0.016621972261077644
GGARPGVG	8	Unmodified	_GGARPGVG_					0	0	0		ENST00000281456.10_1_4:186064403-186064505:+|nuORF	ENST00000281456.10_1_4:186064403-186064505:+|nuORF	ENST00000281456.10_1_4:186064403-186064505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	670.3607055544853	1	670.363099	669.355822	1.4707	0.00098591	-3.7226	-0.0024955	-2.2519	-0.0015096	670.3603206939713	99.547	0.20459	99.547	99.472	99.676	0					10	6	2	0	0	0	0.89051	1	41714	41714		2.3027	0	1	3075700			7104	5701	3498	3518	8850	8850					0.007918486604353348
GGARVKLG	8	Unmodified	_GGARVKLG_					0	0	0		ENSG00000044446|ENST00000379942|PHKA2	ENSG00000044446|ENST00000379942|PHKA2	ENSG00000044446|ENST00000379942|PHKA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	757.4726440310478	1	757.467898	756.460622	1.3443	0.0010183	4.3963	0.0033301	5.7406	0.0043483	757.4704347877798	108.41	0.25838	108.41	108.2	108.46	0					17	12	2	0	0	0	0.89176	1	46721	46721		0.79363	0	1	23088000			7105	671	3499	3519	8851	8851					0.07264970136998272
GGARVKLG	8	Unmodified	_GGARVKLG_					0	0	0		ENSG00000044446|ENST00000379942|PHKA2	ENSG00000044446|ENST00000379942|PHKA2	ENSG00000044446|ENST00000379942|PHKA2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	757.467898	756.460622	2.7425	0.0020774	1.0341	0.00078327	3.7766	0.0028607	757.4686555397714	108.27	0.1708	108.43	108.37	108.54	0.15795	-0.0086682	-0.00061662	NaN	0.79363	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11627000			7106	671	3499	3519							0.07264970136998272
GGCGGGLC	8	Unmodified	_GGCGGGLC_					0	0	0			REV__nc|ENSG00000203706|Q5TG53|SERTAD4-AS1	REV__nc|ENSG00000203706|Q5TG53|SERTAD4-AS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	622.5581542849541	1	623.227593	622.220316	0.80018	0.0004987	-0.5692	-0.00035474	0.23099	0.00014396	623.2261509977451	12.39	0.98804	12.39	11.972	12.96	0					97	31	5	0	0	0	2.3239	1	5159	5159		0.79363	0	1	3435600	+		7107	14527	3500	3520	8852	8852					-0.10590510517056373
GGDDGDGD	8	Unmodified	_GGDDGDGD_					0	0	0		nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant;nc|ENSG00000075275|Q9NYQ6|CELSR1;ENSG00000075275|ENST00000674500|CELSR1;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2	nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.2139770388603	1	707.211468	706.204192	0.8475	0.00059936	2.5007	0.0017685	3.3482	0.0023679	707.2140827383802	15.94	2.3468	15.94	15.124	17.471	0					142	74	2	0	0	0	0.89198	12	6387	6387;6435;6563;6618;6669;6720;6826;6929;6982;7037;7140;7191		0	0	1	1206700			7108	3015;147;146	3501	3521	8853;8854;8855;8856;8857;8858;8859;8860;8861;8862;8863;8864	8853					-0.16066221948597104
GGDDGDGD	8	Unmodified	_GGDDGDGD_					0	0	0		nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant;nc|ENSG00000075275|Q9NYQ6|CELSR1;ENSG00000075275|ENST00000674500|CELSR1;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2	nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.2125732302666	1	707.211468	706.204192	0.91486	0.000647	1.7389	0.0012298	2.6537	0.0018768	707.2150287479784	17.59	0.76197	17.59	17.41	18.171	0					39	24	2	0	0	0	0.89198	2	7348	7348;7410		0	0	1	293410			7109	3015;147;146	3501	3521	8865;8866	8865					-0.16066221948597104
GGDDSFNTFF	10	Unmodified	_GGDDSFNTFF_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;chr12:49129390-49129566|92|16.45|0.01|11.66|-|2|TUBA1B,None|1	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1106.443041980267	1	1106.44253	1105.43525	1.4714	0.001628	-0.26773	-0.00029623	1.2037	0.0013318	1106.442659806024	67.371	0.39982	68.749	68.546	68.946	1.3778					34	12	4	0	0	0	0.052963	2	28226	28226;28280		88.954	56.648	1	3913100			7110	2190	3502	3522	8867;8868	8867					-0.11324593966742214
GGDDSFNTFF	10	Unmodified	_GGDDSFNTFF_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;chr12:49129390-49129566|92|16.45|0.01|11.66|-|2|TUBA1B,None|1	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7254516482353	2	553.724904	1105.43525	1.7305	0.00095822	-0.2363	-0.00013085	1.4942	0.00082737	553.7247024980777	67.428	0.43029	68.806	68.515	68.946	1.3778					34	13	4	0	0	0	0.81324	2	28247	28247;28296		10.824	4.1008	1	2923300			7111	2190	3502	3522	8869;8870	8869					-0.11324593966742214
GGDDSFNTFF	10	Unmodified	_GGDDSFNTFF_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;chr12:49129390-49129566|92|16.45|0.01|11.66|-|2|TUBA1B,None|1	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1106.444140613079	1	1106.44253	1105.43525	1.3891	0.001537	-1.259	-0.001393	0.13008	0.00014392	1106.441151604675	66.955	0.4019	68.844	68.616	69.018	1.8889					29	12	3	0	0	0	0.059378	2	28096	28048;28096		74.929	49.53	1	3905800			7112	2190	3502	3522	8871;8872	8872					-0.11324593966742214
GGDDSFNTFF	10	Unmodified	_GGDDSFNTFF_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000551324.5_1_12:49523262-49525083:-|nuORF;ENST00000550254.1_1_12:49580073-49582762:-|nuORF;chr12:49129390-49129566|92|16.45|0.01|11.66|-|2|TUBA1B,None|1	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7266113162041	2	553.724904	1105.43525	1.2352	0.00068398	0.4583	0.00025377	1.6935	0.00093775	553.7247505334536	66.89	0.37221	68.779	68.646	69.018	1.8889					30	11	4	0	0	0	0.5476	1	28058	28058		25.399	17.489	1	1592300			7113	2190	3502	3522	8873	8873					-0.11324593966742214
GGDGGGGHA	9	Unmodified	_GGDGGGGHA_					0	0	0		ENST00000468589.5_1_1:197704780-197744549:-|nuORF	ENST00000468589.5_1_1:197704780-197744549:-|nuORF	ENST00000468589.5_1_1:197704780-197744549:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	341.9707824587822	2	342.638434	683.262316	-1.1758	-0.00040289	-0.24967	-8.5547E-05	-1.4255	-0.00048843	342.63890386800534	50.779	0.38034	50.779	50.47	50.85	0					15	11	2	0	0	0	0.11957	1	21119	21119		0	0	1	438620			7114	6719	3503	3523	8874	8874					-0.09198495512680438
GGEGCCCG	8	Unmodified	_GGEGCCCG_					0	0	0			REV__ENST00000505490.2_1_17:79845733-79845814:-|nuORF	REV__ENST00000505490.2_1_17:79845733-79845814:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.0903503298759	2	343.09056	684.166566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.562	1	62.562	62.062	63.062	0								0	0	0	1.0178	1	26083	26083		0	0	1		+		7115	13531	3504	3524	8875	8875					-0.18815051011074502
GGEGPQKT	8	Unmodified	_GGEGPQKT_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	773.3788329958916	1	773.378808	772.371532	1.3212	0.0010218	-0.55879	-0.00043216	0.76245	0.00058966	773.3781314788699	104.67	0.115	104.67	104.6	104.72	0					19	5	5	0	0	0	0.89008	1	44219	44219		2.5775	0	1	712870000			7116	2550	3505	3525	8876	8876					-0.023759096132039303
GGEGPQKT	8	Unmodified	_GGEGPQKT_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	773.3792602419853	1	773.378808	772.371532	2.8066	0.0021706	-2.2817	-0.0017646	0.52494	0.00040598	773.3769135116464	104.55	0.11585	104.73	104.67	104.79	0.1731					21	5	5	0	0	0	0.89178	1	44253	44253		0.69038	0	1	1706799999.9999998			7117	2550	3505	3525	8877	8877					-0.023759096132039303
GGEGPQKT	8	Unmodified	_GGEGPQKT_					0	0	0		ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	ENSG00000132938|ENST00000612955|MTUS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	773.378808	772.371532	2.5928	0.0020052	-1.5159	-0.0011724	1.0769	0.00083282	773.3776232567251	104.6	0.12735	104.76	104.7	104.82	0.16055	0.045345	7.4911E-05	NaN	2.5775	24	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3816999999.9999995			7118	2550	3505	3525							-0.023759096132039303
GGEGWWWPGL	10	Unmodified	_GGEGWWWPGL_					0	0	0			REV__ENST00000497070.1_1_3:184055391-184056524:+|nuORF	REV__ENST00000497070.1_1_3:184055391-184056524:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5102416872978	3	382.178536	1143.51378	0.4388	0.0001677	-0.14105	-5.3905E-05	0.29775	0.00011379	382.17865072010807	18.553	0.80908	18.726	18.433	19.242	0.17285					38	27	2	0	0	0	0.12483	1	7786	7786		13.615	7.423	1	380500	+		7119	13475	3506	3526	8878	8878					-0.052236968710076326
GGFAALTA	8	Unmodified	_GGFAALTA_					0	0	0			REV__tr|A0A7D6VTK9|A0A7D6VTK9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09445PE=4SV=1	REV__tr|A0A7D6VTK9|A0A7D6VTK9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	354.1892272830009	2	354.189771	706.36499	-0.75693	-0.0002681	-0.59421	-0.00021046	-1.3511	-0.00047856	354.18955276121665	62.989	0.43859	62.989	62.801	63.24	0					32	13	3	0	0	0	0.89198	1	26245	26245		0	0	1	3325100	+		7120	15491	3507	3527	8879	8879					6.197226070980832E-05
GGFEFTTLSQG	11	Unmodified	_GGFEFTTLSQG_					0	0	0			REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	REV__ENST00000491746.5_1_15:42134104-42137535:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.7742797732353	2	572.269478	1142.5244	2.0613	0.0011796	1.8618	0.0010654	3.9231	0.0022451	572.7738206989759	46.997	0.98991	48.38	47.932	48.922	1.3825					58	30	3	0	0	0	0.96769	1	19725	19725		5.7319	0.50118	1	1559400	+		7121	13434	3508	3528	8880	8880					-0.04115759007231645
GGFPDLHPLRA	11	Unmodified	_GGFPDLHPLRA_					0	0	0		ENSG00000204950|ENST00000378075|LRRC10B	ENSG00000204950|ENST00000378075|LRRC10B	ENSG00000204950|ENST00000378075|LRRC10B	MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3173705935478	2	590.317097	1178.61964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.255	1	17.294	16.794	17.794	1.0392								0	0	0	0.63775	1	6749	6749		1.1933	0.50296	1				7122	5168	3509	3529	8881	8881					0.03747638974459733
GGGCVVGK	8	Unmodified	_GGGCVVGK_					0	0	0		ENST00000392779.6_1_3:160821289-160823116:-|nuORF	ENST00000392779.6_1_3:160821289-160823116:-|nuORF	ENST00000392779.6_1_3:160821289-160823116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.6767150759697	2	338.675974	675.337395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.69	1	12.78	12.28	13.28	0.089381								0	0	0	1.0178	1	5268	5268		2.5775	0	1				7123	6262	3510	3530	8882	8882					-0.013260293057783201
GGGDVDSY	8	Unmodified	_GGGDVDSY_					0	0	0		nc|ENSG00000127329|P23467-2|PTPRB;nc|ENSG00000127329|P23467-4|PTPRB;nc|ENSG00000127329|P23467|PTPRB;ENSG00000127329|ENST00000334414|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	nc|ENSG00000127329|P23467-2|PTPRB	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1531860232353	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.516	1	95.704	95.204	96.204	1.1887								0	0	0	1.0178	1	39762	39762		0.69038	0	1				7124	7864	3511	3531	8883	8883					-0.1008018163813631
GGGGCCCGG	9	Unmodified	_GGGGCCCGG_					0	0	0		ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	670.1746093630791	1	670.174177	669.1669	1.471	0.0009858	0.74652	0.0005003	2.2175	0.0014861	670.1743888207407	106.66	0.11564	106.66	106.61	106.72	0					8	5	2	0	0	0	0.85403	1	45571	45571		0	0	1	10126000			7125	6501	3512	3532	8884	8884					-0.18091631291213162
GGGGCCCGG	9	Unmodified	_GGGGCCCGG_					0	0	0		ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	670.1761962771416	1	670.174177	669.1669	2.6779	0.0017947	0.83295	0.00055822	3.5108	0.0023529	670.1742755960111	106.64	0.10129	106.69	106.62	106.72	0.05455					7	4	2	0	0	0	0.85403	1	45486	45486		0	0	1	16563000			7126	6501	3512	3532	8885	8885					-0.18091631291213162
GGGGCCCGG	9	Unmodified	_GGGGCCCGG_					0	0	0		ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	670.174177	669.1669	2.9264	0.0019612	-0.030825	-2.0658E-05	2.8956	0.0019405	670.1738025860809	106.59	0.098946	106.75	106.7	106.79	0.15781	0.040749	-0.00029246	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12837000			7127	6501	3512	3532							-0.18091631291213162
GGGGCCCGG	9	Unmodified	_GGGGCCCGG_					0	0	0		ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	ENST00000431489.5_1_2:62932928-62934072:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	670.174177	669.1669	2.9635	0.0019861	0.28208	0.00018905	3.2456	0.0021751	670.1739991733731	106.57	0.11092	106.73	106.67	106.78	0.16174	0.024698	-8.2753E-05	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11123000			7128	6501	3512	3532							-0.18091631291213162
GGGGGGARP	9	Unmodified	_GGGGGGARP_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1737853884697	2	343.172444	684.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.041	1	83.253	82.753	83.753	1.2125								0	0	0	0.42693	1	34442	34442		0.52476	0	1		+		7129	11650	3513	3533	8886	8886					-0.024456258620034532
GGGGGGARP	9	Unmodified	_GGGGGGARP_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1739684939384	2	343.172444	684.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.178	1	83.391	82.891	83.891	1.2125								0	0	0	0.42693	1	34499	34499		0.52476	0	1		+		7130	11650	3513	3533	8887	8887					-0.024456258620034532
GGGGGGARP	9	Unmodified	_GGGGGGARP_					0	0	0			REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	REV__ENST00000339382.3_2_8:30890609-30891086:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1742126345634	2	343.172444	684.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.475	1	83.171	82.671	83.671	1.6959								0	0	0	0.42693	1	34183	34183		0.52476	0	1		+		7131	11650	3513	3533	8888	8888					-0.024456258620034532
GGGGGGGD	8	Unmodified	_GGGGGGGD_					0	0	0		ENSG00000120093|ENST00000498678|HOXB3;ENST00000479412.2_1_1:120611949-120612105:-|nuORF;nc|ENSG00000120093|P14651-3|HOXB3;ENSG00000184486|ENST00000328345|POU3F2;ENST00000299633.6_1_15:83876364-83876475:-|nuORF;ENSG00000138795|ENST00000265165|LEF1;nc|ENSG00000138795|Q9UJU2-2|LEF1;ENST00000362074.7_1_1:145209278-145248834:+|nuORF;ENST00000256646.6_1_1:120572588-120612105:-|nuORF;ENST00000403734.2_1_11:62494359-62494803:-|nuORF;nc|ENSG00000286219|P0DPK4|NOTCH2NLC;nc|ENSG00000120093|P14651-2|HOXB3;ENSG00000169857|ENST00000306730|AVEN;nc|ENSG00000011114|Q9P203-5|BTBD7;RAB12|p.L224Vfs*11|1|0.06|ENSG00000206418|chr18:8638195-8638196|-/TGTTGTTTCCTTTATT|frameshift_variant;RAB12|p.F67Qfs*30|1|0.59|ENSG00000206418|chr18:8609925-8609926|-/CAGGTTTGCTGTGTAACATATGCGTGTACTGTGCA|frameshift_variant;ENSG00000206418|ENST00000649141|RAB12;ENSG00000198455|ENST00000374888|ZXDB;ENST00000470900.1_1_3:51422898-51423054:+|nuORF;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1	REV__ENSG00000100599|ENST00000216487|RIN3;REV__ENSG00000254726|ENST00000532414|MEX3A;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000138795|Q9UJU2-6|LEF1	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1965820193291	1	533.19503	532.187754	3.4992	0.0018658	-3.8452	-0.0020503	-0.34602	-0.0001845	533.1947054611949	99.728	0.097687	99.953	99.872	99.969	0.22545					7	3	3	0	0	0	0.89198	1	41941	41941		0	0	1	1000300			7132	8999;10248;11967;7883	3514	3534	8889	8889					-0.09705258324038368
GGGGGGGD	8	Unmodified	_GGGGGGGD_					0	0	0		ENSG00000120093|ENST00000498678|HOXB3;ENST00000479412.2_1_1:120611949-120612105:-|nuORF;nc|ENSG00000120093|P14651-3|HOXB3;ENSG00000184486|ENST00000328345|POU3F2;ENST00000299633.6_1_15:83876364-83876475:-|nuORF;ENSG00000138795|ENST00000265165|LEF1;nc|ENSG00000138795|Q9UJU2-2|LEF1;ENST00000362074.7_1_1:145209278-145248834:+|nuORF;ENST00000256646.6_1_1:120572588-120612105:-|nuORF;ENST00000403734.2_1_11:62494359-62494803:-|nuORF;nc|ENSG00000286219|P0DPK4|NOTCH2NLC;nc|ENSG00000120093|P14651-2|HOXB3;ENSG00000169857|ENST00000306730|AVEN;nc|ENSG00000011114|Q9P203-5|BTBD7;RAB12|p.L224Vfs*11|1|0.06|ENSG00000206418|chr18:8638195-8638196|-/TGTTGTTTCCTTTATT|frameshift_variant;RAB12|p.F67Qfs*30|1|0.59|ENSG00000206418|chr18:8609925-8609926|-/CAGGTTTGCTGTGTAACATATGCGTGTACTGTGCA|frameshift_variant;ENSG00000206418|ENST00000649141|RAB12;ENSG00000198455|ENST00000374888|ZXDB;ENST00000470900.1_1_3:51422898-51423054:+|nuORF;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1	REV__ENSG00000100599|ENST00000216487|RIN3;REV__ENSG00000254726|ENST00000532414|MEX3A;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000138795|Q9UJU2-6|LEF1	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	533.19503	532.187754	3.415	0.0018208	-7.9782	-0.004254	-4.5633	-0.0024331	533.1915481514443	99.798	0.073357	99.996	99.945	100.02	0.19767	0.021109	-0.00075085	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	690870			7133	8999;10248;11967;7883	3514	3534							-0.09705258324038368
GGGGGGGG	8	Unmodified	_GGGGGGGG_					0	0	0		ENSG00000178233|ENST00000451188|TMEM151B;ENSG00000166233|ENST00000379887|ARIH1;ENSG00000120738|ENST00000239938|EGR1;ENSG00000143376|ENST00000458013|SNX27;nc|ENSG00000143376|Q96L92-3|SNX27;ENSG00000089280|ENST00000254108|FUS;ENST00000252674.8_2_19:6279890-6279947:-|nuORF;nc|ENSG00000139154|Q6ZN18|AEBP2;nc|ENSG00000126746|Q8TF68-2|ZNF384;nc|ENSG00000115935|O43516-3|WIPF1;ENSG00000164651|ENST00000418710|SP8;ENSG00000119547|ENST00000491143|ONECUT2;ENSG00000165655|ENST00000372524|ZNF503;nc|ENSG00000169083|P10275-3|AR;ENSG00000162613|ENST00000370768|FUBP1;ENSG00000103342|ENST00000434724|GSPT1;nc|ENSG00000103342|P15170-2|GSPT1;nc|ENSG00000126746|Q8TF68|ZNF384;ENSG00000028277|ENST00000692977|POU2F2;nc|ENSG00000165655|Q96F45-2|ZNF503;ENSG00000126746|ENST00000683879|ZNF384;nc|ENSG00000028277|P09086-5|POU2F2;ENSG00000101331|ENST00000452892|CCM2L;nc|ENSG00000089280|P35637-2|FUS;nc|ENSG00000101331|Q9NUG4-2|CCM2L;ENST00000470179.5_1_2:197712669-197791463:-|nuORF;nc|ENSG00000028277|P09086-2|POU2F2;ENSG00000251493|ENST00000615637|FOXD1;nc|ENSG00000028277|P09086-3|POU2F2;nc|ENSG00000126746|Q8TF68-3|ZNF384;ENSG00000153266|ENST00000283268|FEZF2;nc|ENSG00000179915|P58400|NRXN1;nc|ENSG00000166912|Q9NXD2-2|MTMR10;ENSG00000139154|ENST00000266508|AEBP2;nc|ENSG00000179915|P58400-1|NRXN1;SRSF11-C11orf49|1|fusion;ENSG00000171262|ENST00000397609|FAM98B;ENSG00000143869|ENST00000272224|GDF7;ENSG00000108091|ENST00000263102|CCDC6;ENSG00000115935|ENST00000679041|WIPF1;nc|ENSG00000100106|Q9H2D6-6|TRIOBP;ENSG00000198914|ENST00000361360|POU3F3;ENST00000589239.5_1_19:14080804-14104655:-|nuORF;nc|ENSG00000115935|O43516-2|WIPF1;nc|ENSG00000164651|Q8IXZ3|SP8;ENSG00000174279|ENST00000308618|EVX2;ENSG00000138606|ENST00000690270|SHF;ENSG00000105723|ENST00000222330|GSK3A;nc|ENSG00000028277|P09086|POU2F2;ENST00000557026.5_1_14:75551269-75572727:-|nuORF;SETD1A|p.R461Pfs*18|1|0.21|ENSG00000099381|chr16:30965117-30965118|-/C|frameshift_variant;nc|ENSG00000169083|P10275-4|AR;ENSG00000090975|ENST00000320201|PITPNM2;nc|ENSG00000090975|Q9BZ72-2|PITPNM2;ENSG00000135631|ENST00000486777|RAB11FIP5;RAB11FIP5|p.Q575Pfs*30|1|0.03|ENSG00000135631|chr2:73076027-73076028|-/G|frameshift_variant;ENSG00000164742|ENST00000297323|ADCY1;ENSG00000174953|ENST00000496811|DHX36;nc|ENSG00000174953|Q9H2U1-2|DHX36;ENSG00000100599|ENST00000216487|RIN3;nc|ENSG00000186174|Q86UU0-3|BCL9L;nc|ENSG00000144406|Q8N2C7|UNC80;nc|ENSG00000144406|Q8N2C7-7|UNC80;nc|ENSG00000144406|Q8N2C7-4|UNC80;nc|ENSG00000144406|Q8N2C7-2|UNC80;ARID1B|p.K1964Tfs*20|1|0.51|ENSG00000049618|chr6:157207070-157207071|-/C|frameshift_variant;ARID1B|p.M1952Ifs*32|1|0.22|ENSG00000049618|chr6:157207035-157207036|-/A|frameshift_variant;ENSG00000155816|ENST00000319653|FMN2;ENSG00000099381|ENST00000262519|SETD1A;ENSG00000186174|ENST00000683865|BCL9L;nc|ENSG00000186174|Q86UU0-2|BCL9L;nc|ENSG00000186174|Q86UU0-4|BCL9L;nc|ENSG00000174953|Q9H2U1-3|DHX36;ENSG00000132005|ENST00000254325|RFX1;ENSG00000119638|ENST00000238616|NEK9;RFX1|p.V727Gfs*11|1|0.3|ENSG00000132005|chr19:13965480-13965481|-/TC|frameshift_variant;nc|ENSG00000177374|Q14526|HIC1;ENSG00000177374|ENST00000619757|HIC1;BCL9L|p.V674Sfs*38|1|0.47|ENSG00000186174|chr11:118901723-118901723|C/-|frameshift_variant;CON__Q3TTY5;sp|Q6SW37|EP84_HCMVMEarlyphosphoproteinp84OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL112/UL113PE=3SV=1;ENSG00000145743|ENST00000542267|FBXL17;sp|P17151|EP84_HCMVAEarlyphosphoproteinp84OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL112/UL113PE=1SV=2;ENST00000513847.5_1_X:66764886-66909456:+|nuORF;nc|ENSG00000163214|Q6P158-2|DHX57;nc|ENSG00000162613|Q96AE4-2|FUBP1;nc|ENSG00000100106|Q9H2D6-7|TRIOBP;ENSG00000103489|ENST00000261381|XYLT1;chr14:32935003-33055905|363|14.48|0.18|6.33|+|ENST00000551492|NPAS3,NPAS3;chr14:32935003-33215182|359|14.38|0.31|5.53|+|ENST00000551634|NPAS3,NPAS3;ENST00000418924.6_1_14:93042630-93154594:+|nuORF;ENSG00000151322|ENST00000356141|NPAS3;nc|ENSG00000151322|Q8IXF0-3|NPAS3;ENSG00000169083|ENST00000374690|AR;nc|ENSG00000151322|Q8IXF0-2|NPAS3;nc|ENSG00000151322|Q8IXF0-4|NPAS3;ENSG00000164588|ENST00000303230|HCN1;ENSG00000173327|ENST00000309100|MAP3K11;chr19:36141075-36141163|198|60.89|0.05|10.35|+|2|CAPNS1,None|1;nc|ENSG00000164548|Q13595-4|TRA2A;ENST00000607598.2_1_8:9413493-9414024:-|nuORF;ENST00000578430.1_1_17:56083680-56084618:-|nuORF;nc|ENSG00000156113|Q12791-6|KCNMA1;nc|ENSG00000160201|Q01081-4|U2AF1;ENST00000542519.1_1_12:6782380-6787618:-|nuORF;ENST00000405737.2_2_13:41556342-41635296:-|nuORF;ENST00000469170.5_1_1:70687319-70696797:+|nuORF;ENST00000489107.1_1_9:12775714-12777225:+|nuORF;ENST00000229416.10_1_6:53409297-53409843:-|nuORF;nc|ENSG00000164548|Q13595-3|TRA2A;ENST00000555993.6_1_14:71267787-71275967:-|nuORF;nc|ENSG00000292354|O15266-2|SHOX;ENST00000303538.12_1_4:39929740-39979529:-|nuORF;nc|ENSG00000162923|Q9H7D7-4|WDR26;PI4KA|p.H215Lfs*10|1|0.04|ENSG00000241973|chr22:20819786-20819787|-/A|frameshift_variant;nc|ENSG00000178233|Q8IW70-2|TMEM151B;SRSF11-C11orf49|2|fusion;nc|ENSG00000162923|Q9H7D7-3|WDR26;ZNF384|p.P205Rfs*5|1|0.03|ENSG00000126746|chr12:6678199-6678200|-/C|frameshift_variant;nc|ENSG00000136450|Q07955-3|SRSF1;nc|ENSG00000136527|P62995-3|TRA2B;ENST00000599159.1_1_19:40329665-40336940:-|nuORF;ENST00000491491.1_1_13:77900653-77900983:-|nuORF;ENST00000507703.1_1_4:124319460-124322783:+|nuORF;SRSF11|p.G29Vfs*11|1|0.14|ENSG00000116754|chr1:70221721-70221722|-/T|frameshift_variant;FBL|p.G47V|1|0.29|ENSG00000105202|chr19:39840658-39840658|C/A|missense_variant;ENST00000393033.8_1_19:14603704-14606936:-|nuORF;ENST00000372324.5_1_1:44445001-44445064:+|nuORF;SRSF1|p.R97Q|1|0.55|ENSG00000136450|chr17:58006432-58006432|C/T|missense_variant;HOXB3|p.C153W|1|0.44|ENSG00000120093|chr17:48551171-48551171|A/C|missense_variant;ENST00000377560.9_1_12:112820080-112820209:-|nuORF;ENST00000371142.8_1_10:98346624-98346687:-|nuORF;chr16:31184396-31186802|157|25.0|0.64|5.29|+|2|FUS,FUS|1;chr16:31184396-31188325|141|15.18|0.05|8.15|+|2|FUS,FUS|1;chr3:9950172-9952142|357|12.92|0.43|4.93|-|0|PRRT3,None|1;ENST00000373132.3_1_1:36851434-36851494:-|nuORF;HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|355|3|anti-sense;ZNF503|p.F56Lfs*15|1|0.23|ENSG00000165655|chr10:75401233-75401254|AGGGGGGCACGGCGTGCACAAA/-|frameshift_variant;chr19:36141075-36146037|426|11.72|0.11|6.74|+|ENST00000629983|CAPNS1,CAPNS1;ENST00000370544.9_1_1:87794323-87794602:+|nuORF;ENST00000426595.1_1_7:55955154-55973975:+|nuORF;ENST00000258111.4_1_12:70760395-70760632:+|nuORF;ENST00000317216.2_1_8:22550456-22550672:-|nuORF;ENST00000378279.3_1_8:117950559-117950772:+|nuORF;ENST00000307790.7_3_22:30221719-30234222:-|nuORF;ENST00000238855.11_1_2:64751466-64751667:+|nuORF;ENST00000345425.6_1_19:14593738-14606936:-|nuORF;ENSG00000153714|ENST00000319264|LURAP1L;nc|ENSG00000178573|O75444|MAF;nc|ENSG00000136352|P43699|NKX2-1;SRSF11-C11orf49|3|fusion;ENST00000524856.1_1_11:65375623-65381302:-|nuORF;ENSG00000168772|ENST00000394767|CXXC4;ENSG00000119919|ENST00000344586|NKX2-3;nc|ENSG00000115935|O43516-4|WIPF1;nc|ENSG00000168779|O60902-3|SHOX2;ENSG00000128709|ENST00000249499|HOXD9;DHX57|p.V297Dfs*38|1|0.04|ENSG00000163214|chr2:38861520-38861520|A/-|frameshift_variant;ENSG00000197451|ENST00000358344|HNRNPAB;nc|ENSG00000197451|Q99729|HNRNPAB;ENSG00000103241|ENST00000262426|FOXF1;NKX2-1|p.A338Gfs*19|1|0.29|ENSG00000136352|chr14:36517381-36517382|-/AAGAGGACTGCTGGGCC|frameshift_variant;ENSG00000131724|ENST00000371666|IL13RA1;ENSG00000142408|ENST00000270458|CACNG8;ENST00000556170.5_1_14:75553702-75572727:-|nuORF;SRSF11-C11orf49|4|fusion;ENSG00000205476|ENST00000380243|CCDC85C;ENSG00000178573|ENST00000326043|MAF;ENSG00000130675|ENST00000252971|MNX1;ENSG00000136352|ENST00000354822|NKX2-1;ENSG00000182968|ENST00000330949|SOX1;FEZF2|p.V362Gfs*28|1|0.04|ENSG00000153266|chr3:62371252-62371253|-/TTCCCCCTCGCTTCCTCTTCCCC|frameshift_variant;nc|ENSG00000168779|O60902|SHOX2;ENSG00000123364|ENST00000243056|HOXC13;ENST00000608721.1_1_6:161412512-161413208:-|nuORF;nc|ENSG00000165655|Q96F45-3|ZNF503;ENSG00000164548|ENST00000297071|TRA2A;nc|ENSG00000131724|P78552-2|IL13RA1;nc|ENSG00000120254|Q6UB35-2|MTHFD1L;ENST00000591649.5_1_19:10797828-10799985:+|nuORF;ENST00000301015.13_2_16:88800318-88802577:-|nuORF;ENST00000487509.6_1_16:31191511-31196501:+|nuORF;ENST00000555405.5_1_14:75551269-75558248:-|nuORF;ENST00000216019.11_1_22:38881942-38884127:-|nuORF;ENSG00000136450|ENST00000258962|SRSF1;ENST00000587928.5_1_19:10794459-10799985:+|nuORF;nc|ENSG00000160201|Q01081-2|U2AF1;ENSG00000160201|ENST00000291552|U2AF1;nc|ENSG00000197451|Q99729-3|HNRNPAB;nc|ENSG00000197451|Q99729-4|HNRNPAB;ENSG00000136527|ENST00000453386|TRA2B;ENSG00000185129|ENST00000331327|PURA;ENSG00000105202|ENST00000221801|FBL;ENSG00000168779|ENST00000483851|SHOX2;AEBP2|p.G292Efs*29|1|0.09|ENSG00000139154|chr12:19462712-19462712|G/-|frameshift_variant;ENSG00000203782|ENST00000368742|LORICRIN;nc|ENSG00000153266|Q8TBJ5-2|FEZF2;ENST00000527304.1_1_11:65380411-65381302:-|nuORF;ENSG00000185960|ENST00000686671|SHOX;nc|ENSG00000136450|Q07955-2|SRSF1;ENSG00000144406|ENST00000673920|UNC80;nc|ENSG00000062524|P29376-3|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;nc|ENSG00000062524|P29376-5|LTK;nc|ENSG00000062524|P29376-4|LTK;ENSG00000062524|ENST00000263800|LTK;ENSG00000080709|ENST00000673685|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;ENST00000481580.1_1_20:32664521-32665129:+|nuORF;nc|ENSG00000125970|Q9UKM9-2|RALY;ENSG00000125970|ENST00000246194|RALY;ENSG00000177733|ENST00000314940|HNRNPA0;KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1;ENSG00000169991|ENST00000455833|IFFO2;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1;ENSG00000120093|ENST00000498678|HOXB3;ENST00000479412.2_1_1:120611949-120612105:-|nuORF;nc|ENSG00000120093|P14651-3|HOXB3;ENSG00000184486|ENST00000328345|POU3F2;ENST00000299633.6_1_15:83876364-83876475:-|nuORF;ENSG00000138795|ENST00000265165|LEF1;nc|ENSG00000138795|Q9UJU2-2|LEF1;ENST00000362074.7_1_1:145209278-145248834:+|nuORF;ENST00000256646.6_1_1:120572588-120612105:-|nuORF;ENST00000403734.2_1_11:62494359-62494803:-|nuORF;nc|ENSG00000286219|P0DPK4|NOTCH2NLC;nc|ENSG00000120093|P14651-2|HOXB3;ENSG00000169857|ENST00000306730|AVEN;nc|ENSG00000116754|Q05519-2|SRSF11;ENSG00000116754|ENST00000370949|SRSF11;nc|ENSG00000276644|Q9UI36-4|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1;ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF;ENST00000273047.8_1_3:19988696-19992457:+|nuORF;ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;ENSG00000163214|ENST00000457308|DHX57;nc|ENSG00000162367|P17542-3|TAL1;nc|ENSG00000162367|P17542-2|TAL1;ENSG00000162367|ENST00000691006|TAL1;CAPNS1-PRPF6|1|fusion;ENSG00000126247|ENST00000246533|CAPNS1;KRT10|p.R370Qfs*9|1|0.05|ENSG00000186395|chr17:40820074-40820095|ATCTCCAGAGCTTGTACATTAC/-|frameshift_variant;ENSG00000186395|ENST00000269576|KRT10;CON__P13645;nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;ENSG00000049618|ENST00000636930|ARID1B;ENSG00000054598|ENST00000645831|FOXC1;ENSG00000061455|ENST00000407847|PRDM6;ENSG00000084731|ENST00000264712|KIF3C;KIF3C|p.S409Tfs*16|1|0.02|ENSG00000084731|chr2:25980692-25980693|-/ATTG|frameshift_variant;ENSG00000104824|ENST00000221419|HNRNPL;nc|ENSG00000109534|Q9NY12-2|GAR1;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;ENSG00000109534|ENST00000226796|GAR1;nc|ENSG00000129351|Q12906|ILF3;ENSG00000129351|ENST00000588657|ILF3;nc|ENSG00000130224|Q5VUJ6-2|LRCH2;ENSG00000130224|ENST00000317135|LRCH2;ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;ENSG00000137449|ENST00000538197|CPEB2;nc|ENSG00000140836|Q15911-2|ZFHX3;ENSG00000140836|ENST00000268489|ZFHX3;ENSG00000141385|ENST00000269143|AFG3L2;ENSG00000151615|ENST00000281321|POU4F2;ENSG00000152284|ENST00000282111|TCF7L1;ENSG00000161671|ENST00000334976|EMC10;ENSG00000163872|ENST00000305135|YEATS2;ENSG00000166912|ENST00000435680|MTMR10;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENSG00000171094|ENST00000389048|ALK;nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000172845|Q02447-2|SP3;ENSG00000172845|ENST00000310015|SP3;ENSG00000181588|ENST00000402693|MEX3D;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D;ENSG00000205922|ENST00000382349|ONECUT3;nc|ENSG00000090975|Q9BZ72-3|PITPNM2;nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1	REV__ENSG00000116754|ENST00000370949|SRSF11;nc|ENSG00000062524|P29376-3|LTK;ENSG00000080709|ENST00000673685|KCNN2;ENST00000481580.1_1_20:32664521-32665129:+|nuORF;ENSG00000177733|ENST00000314940|HNRNPA0;REV__ENSG00000155816|ENST00000319653|FMN2;KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;ENSG00000169991|ENST00000455833|IFFO2;nc|ENSG00000100201|Q92841-1|DDX17;REV__ENSG00000099381|ENST00000262519|SETD1A;sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;REV__ENSG00000100599|ENST00000216487|RIN3;nc|ENSG00000116754|Q05519-2|SRSF11;REV__ENSG00000141385|ENST00000269143|AFG3L2;nc|ENSG00000276644|Q9UI36-4|DACH1;ENSG00000241973|ENST00000255882|PI4KA;REV__DHX57|p.V297Dfs*38|1|0.04|ENSG00000163214|chr2:38861520-38861520|A/-|frameshift_variant;REV__nc|ENSG00000089280|P35637-2|FUS;ENST00000273047.8_1_3:19988696-19992457:+|nuORF;ENSG00000132466|ENST00000358602|ANKRD17;REV__ENSG00000119919|ENST00000344586|NKX2-3;ENSG00000163214|ENST00000457308|DHX57;nc|ENSG00000162367|P17542-3|TAL1;REV__ENSG00000145743|ENST00000542267|FBXL17;REV__nc|ENSG00000144406|Q8N2C7-7|UNC80;CAPNS1-PRPF6|1|fusion;KRT10|p.R370Qfs*9|1|0.05|ENSG00000186395|chr17:40820074-40820095|ATCTCCAGAGCTTGTACATTAC/-|frameshift_variant;nc|ENSG00000049618|Q8NFD5-1|ARID1B;ENSG00000054598|ENST00000645831|FOXC1;ENSG00000061455|ENST00000407847|PRDM6;ENSG00000084731|ENST00000264712|KIF3C;ENSG00000104824|ENST00000221419|HNRNPL;nc|ENSG00000109534|Q9NY12-2|GAR1;nc|ENSG00000129351|Q12906|ILF3;nc|ENSG00000130224|Q5VUJ6-2|LRCH2;ENSG00000130449|ENST00000252744|ZSWIM6;nc|ENSG00000137449|Q7Z5Q1-8|CPEB2;nc|ENSG00000140836|Q15911-2|ZFHX3;ENSG00000141385|ENST00000269143|AFG3L2;ENSG00000151615|ENST00000281321|POU4F2;ENSG00000152284|ENST00000282111|TCF7L1;ENSG00000161671|ENST00000334976|EMC10;ENSG00000163872|ENST00000305135|YEATS2;ENSG00000166912|ENST00000435680|MTMR10;ENSG00000171094|ENST00000389048|ALK;nc|ENSG00000172845|Q02447-6|SP3;ENSG00000181588|ENST00000402693|MEX3D;ENSG00000205922|ENST00000382349|ONECUT3;nc|ENSG00000090975|Q9BZ72-3|PITPNM2;nc|ENSG00000138795|Q9UJU2-6|LEF1;REV__nc|ENSG00000151322|Q8IXF0-4|NPAS3;REV__CON__Q3TTY5;REV__nc|ENSG00000028277|P09086-3|POU2F2;REV__nc|ENSG00000090975|Q9BZ72-3|PITPNM2;REV__ENSG00000103489|ENST00000261381|XYLT1;REV__ENSG00000104824|ENST00000221419|HNRNPL;REV__ENSG00000108091|ENST00000263102|CCDC6;REV__ENSG00000119638|ENST00000238616|NEK9;REV__ENST00000587928.5_1_19:10794459-10799985:+|nuORF;REV__nc|ENSG00000138795|Q9UJU2-5|LEF1;REV__nc|ENSG00000140836|Q15911-2|ZFHX3;REV__nc|ENSG00000143376|Q96L92-3|SNX27;REV__ENSG00000153266|ENST00000283268|FEZF2;REV__nc|ENSG00000160201|Q01081-4|U2AF1;REV__ENSG00000171094|ENST00000389048|ALK;REV__nc|ENSG00000172845|Q02447-6|SP3;REV__ENSG00000185129|ENST00000331327|PURA;REV__nc|ENSG00000197451|Q99729-3|HNRNPAB;REV__PI4KA|p.H215Lfs*10|1|0.04|ENSG00000241973|chr22:20819786-20819787|-/A|frameshift_variant;REV__ENST00000491491.1_1_13:77900653-77900983:-|nuORF;REV__nc|ENSG00000286219|P0DPK4|NOTCH2NLC	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.2083923220634	1	475.189551	474.182274	3.5308	0.0016778	4.2947	0.0020408	7.8254	0.0037186	475.18917367038983	101.7	0.55644	101.77	101.52	102.07	0.067017					65	17	5	0	0	0	0.89198	4	42528	42528;42576;42634;42685		0	0	1	12071000		+	7134	2533;10248;1055;1478;5341;8999;8392;714;751;10143;117;7883;1252;3438;11008;2957;15974;9481;7838;8259;5191;4582;4256;4176;8572;9247;9107;9147;3934;9548;9755;10083;10133;10207;10452;10591;11075;11451;11675;11924;8897;3728;2436;3319;756;1007;2294;4463;10502;4124;8950;1987;5468;8442;8884;5682;9558;3668;3613;10286;348;692;1668;2401;2419;13431;2768;2937;3295;3597;14568	3515	3535	8890;8891;8892;8893	8890					-0.07584937115859702
GGGGGGGYY	9	Unmodified	_GGGGGGGYY_					0	0	0		ENSG00000253293|ENST00000283921|HOXA10	ENSG00000253293|ENST00000283921|HOXA10	ENSG00000253293|ENST00000283921|HOXA10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	372.2229186892509	2	372.65101	743.287468	1.1054	0.00041193	-1.1518	-0.00042922	-0.046404	-1.7292E-05	372.6513298542272	32.394	0.95122	32.688	32.216	33.167	0.29431					56	30	2	0	0	0	0.11957	1	13616	13616		0	0	1	1407800			7135	5385	3516	3536	8894	8894					-0.09444440710103663
GGGGPGEA	8	Unmodified	_GGGGPGEA_					0	0	0			REV__ENSG00000114166|ENST00000263754|KAT2B	REV__ENSG00000114166|ENST00000263754|KAT2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	601.2577392458916	1	601.257631	600.250354	2.6453	0.0015905	-0.49781	-0.00029931	2.1475	0.0012912	601.2570554167356	118.43	2.7787	118.47	116.91	119.69	0.041039					146	86	3	0	0	0	0.89198	13	50513	50513;50594;50642;50698;50743;50794;50836;50889;50952;51005;51056;51111;51162		0	0	1	2916600	+		7136	9403	3517	3537	8895;8896;8897;8898;8899;8900;8901;8902;8903;8904;8905;8906;8907	8895					-0.06576112255868338
GGGGPGEA	8	Unmodified	_GGGGPGEA_					0	0	0			REV__ENSG00000114166|ENST00000263754|KAT2B	REV__ENSG00000114166|ENST00000263754|KAT2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.2592651247978	1	601.257631	600.250354	3.1767	0.00191	-0.7678	-0.00046165	2.4089	0.0014484	601.2567405557669	119.67	1.6728	119.91	118.56	120.24	0.243					103	51	3	0	0	0	0.89198	6	51477	51477;51528;51591;51656;51760;51813		0	0	1	1635600	+		7137	9403	3517	3537	8908;8909;8910;8911;8912;8913	8908					-0.06576112255868338
GGGGPGEA	8	Unmodified	_GGGGPGEA_					0	0	0			REV__ENSG00000114166|ENST00000263754|KAT2B	REV__ENSG00000114166|ENST00000263754|KAT2B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	601.257631	600.250354	2.6453	0.0015905	-0.49781	-0.00029931	2.1475	0.0012912	601.2570554167356	118.43	2.7787	118.47	116.91	119.69	0.041039	0	0	NaN	0	146	86	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2916600	+		7138	9403	3517	3537							-0.06576112255868338
GGGVTPLV	8	Unmodified	_GGGVTPLV_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13;CDK13|p.T444Yfs*5|1|0.19|ENSG00000065883|chr7:39987716-39987717|-/T|frameshift_variant;CDK13-POU6F2|2|fusion;CDK13-POU6F2|1|fusion	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2053710818291	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89178	1	13699	13699		0.69038	0	1	2241600			7139	795	3518	3538	8914	8914					0.035027702601951205
GGHGAGPH	8	Unmodified	_GGHGAGPH_					0	0	0			REV__ENST00000367137.3_1_1:205768167-205768923:-|nuORF	REV__ENST00000367137.3_1_1:205768167-205768923:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.1592895388603	2	345.159337	688.304121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.561	1	2.561	2.061	3.061	0								0	0	0	1.0178	1	1050	1050		11.114	4.7604	1		+		7140	12619	3519	3539	8915	8915					-0.05249895033489338
GGHGAWVP	8	Unmodified	_GGHGAWVP_					0	0	0			REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	390.6919738650322	2	390.693013	779.371472	-1.0477	-0.00040934	-1.2658	-0.00049453	-2.3135	-0.00090387	390.6923300497203	18.377	1.2668	18.377	17.81	19.077	0					102	43	3	0	0	0	0.88409	1	7607	7607		6.3541	3.4649	1	10037000	+		7141	11862	3520	3540	8916	8916					-0.027038648225357065
GGHGAWVP	8	Unmodified	_GGHGAWVP_					0	0	0			REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	2	390.693013	779.371472	0.49286	0.00019256	-1.1105	-0.00043385	-0.61761	-0.0002413	390.69230115884005	18.143	1.0736	18.316	17.798	18.872	0.17285					56	37	3	0	0	0	2.3239	1	7619	7619		2.8892	2.8892	1	1519200	+		7142	11862	3520	3540	8917	8917					-0.027038648225357065
GGHGAWVP	8	Unmodified	_GGHGAWVP_					0	0	0			REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2843810915947	2	390.693013	779.371472	-0.13559	-5.2974E-05	-0.33087	-0.00012927	-0.46646	-0.00018224	390.6924338674961	17.411	0.79845	18.309	18.083	18.882	0.89794					43	31	2	0	0	0	2.3239	1	7210	7210		6.3541	5.5605	1	928490	+		7143	11862	3520	3540	8918	8918					-0.027038648225357065
GGHGAWVP	8	Unmodified	_GGHGAWVP_					0	0	0			REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	REV__ENST00000564629.1_1_16:31469053-31469224:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2839843630791	2	390.693013	779.371472	0.1016	3.9696E-05	-0.98796	-0.00038599	-0.88636	-0.00034629	390.6921051055283	17.173	0.6727	18.475	18.324	18.996	1.3023					27	22	2	0	0	0	2.3239	1	7315	7315		6.3541	3.4649	1	763240	+		7144	11862	3520	3540	8919	8919					-0.027038648225357065
GGHGDHVF	8	Unmodified	_GGHGDHVF_					0	0	0		ENST00000337318.7_2_10:126309750-126310008:-|nuORF	ENST00000337318.7_2_10:126309750-126310008:-|nuORF	ENST00000337318.7_2_10:126309750-126310008:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.1875793337822	2	413.185552	824.35655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.905	1	96.905	96.405	97.405	0								0	0	0	1.0178	1	40511	40511		0.79363	0	1				7145	5920	3521	3541	8920	8920					-0.06265356690528279
GGHGGAPC	8	Unmodified	_GGHGGAPC_					0	0	0		ENST00000280571.9_1_12:123920839-123921196:-|nuORF	ENST00000280571.9_1_12:123920839-123921196:-|nuORF	ENST00000280571.9_1_12:123920839-123921196:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1607543826103	2	328.134473	654.254394	-3.1184	-0.0010233	-2.273	-0.00074585	-5.3914	-0.0017691	328.13484470680345	14.952	0.18625	14.952	14.781	14.967	0					8	5	2	0	0	0	2.3239	1	6198	6198		0	0	1	114550			7146	5696	3522	3542	8921	8921					-0.08656346033797035
GGKAALAPA	9	Unmodified	_GGKAALAPA_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2248412966728	2	378.224146	754.433738	2.3231	0.00087867	-0.6385	-0.00024149	1.6846	0.00063718	378.2238323456355	107.75	0.2193	107.91	107.79	108.01	0.15781					32	11	4	0	0	0	0.85403	1	46409	46409		0	0	1	1147900000			7147	4564	3523	3543	8922	8922					0.04669861525781016
GGKAALAPA	9	Unmodified	_GGKAALAPA_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	755.4427368044853	1	755.441015	754.433738	2.4837	0.0018763	-0.8242	-0.00062263	1.6595	0.0012536	755.4402419535146	107.75	0.18303	107.91	107.81	107.99	0.15781					23	9	3	0	0	0	0.85403	1	46411	46411		0	0	1	319390000			7148	4564	3523	3543	8923	8923					0.04669861525781016
GGKAALAPA	9	Unmodified	_GGKAALAPA_					0	0	0		ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	ENSG00000180929|ENST00000322241|GPR62	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	755.4418823122978	1	755.441015	754.433738	2.7369	0.0020675	-1.1411	-0.00086204	1.5958	0.0012055	755.4399042679063	107.73	0.18592	107.89	107.79	107.98	0.15795					23	9	3	0	0	0	0.85403	1	46413	46413		0	0	1	255590000			7149	4564	3523	3543	8924	8924					0.04669861525781016
GGKDGDPK	8	Unmodified	_GGKDGDPK_					0	0	0		ENSG00000205832|ENST00000444310|C16orf96	ENSG00000205832|ENST00000444310|C16orf96	ENSG00000205832|ENST00000444310|C16orf96	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	387.1510803103447	2	387.193042	772.371532	1.5655	0.00060615	-1.2974	-0.00050234	0.2681	0.00010381	387.1925743441241	65.455	0.3087	67.363	67.187	67.496	1.9085					16	9	3	0	0	0	2.3239	1	27510	27510		0	0	1	455130			7150	5189	3524	3544	8925	8925					-0.023759096131925617
GGKGGGGGGAG	11	Unmodified	_GGKGGGGGGAG_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MSMS	GG20161007_CRH_Patient100_W632_01	3	366.1762878298759	2	366.175184	730.335815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.39	1	42.716	42.216	43.216	1.3254								0	0	0	0.63775	1	17355	17355		1.3295	0.5359	1				7151	5370	3525	3545	8926	8926					-0.04013947070188806
GGKGGGGGGAG	11	Unmodified	_GGKGGGGGGAG_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MSMS	GG20161007_CRH_Patient100_W632_01	3	366.1764404177666	2	366.175184	730.335815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.516	1	42.841	42.341	43.341	1.3254								0	0	0	0.63775	1	17406	17406		1.3295	0.5359	1				7152	5370	3525	3545	8927	8927					-0.04013947070188806
GGKGGGGGGAG	11	Unmodified	_GGKGGGGGGAG_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MSMS	GG20161007_CRH_Patient100_W632_01	3	366.1763183474541	2	366.175184	730.335815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.648	1	42.974	42.474	43.474	1.3254								0	0	0	0.63775	1	17459	17459		1.3295	0.5359	1				7153	5370	3525	3545	8928	8928					-0.04013947070188806
GGKGKGKGA	9	Unmodified	_GGKGKGKGA_					0	0	0			REV__ENST00000517974.1_1_8:117671201-117768048:-|nuORF	REV__ENST00000517974.1_1_8:117671201-117768048:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2285339236259	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.448	1	86.044	85.544	86.544	1.5962								0	0	0	0.42693	1	35419	35419		1.8442	1.1539	1		+		7154	10330	3526	3546	8929	8929					0.05100379757311657
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2509948611259	2	408.25156	814.488568	0.36392	0.00014857	0.91222	0.00037242	1.2761	0.00052099	408.25165452507986	67.742	0.63171	67.742	67.349	67.98	0					32	19	2	0	0	0	0.89051	1	28261	28261		2.3027	0	1	2681800			7155	6470	3527	3547	8930	8930					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2518188357353	2	408.25156	814.488568	0.32193	0.00013143	0.85186	0.00034777	1.1738	0.0004792	408.25175950512426	68.596	0.50312	68.596	68.359	68.862	0					39	15	3	0	0	0	0.89051	1	28520	28520		2.3027	0.24298	1	8659000			7156	6470	3527	3547	8931	8931					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2535278201103	2	408.25156	814.488568	2.0389	0.00083236	-0.30633	-0.00012506	1.7325	0.0007073	408.2514168674927	66.787	0.34415	67.112	66.876	67.22	0.32449					14	10	2	0	0	0	0.89051	1	27980	27980		2.3027	0	1	969690			7157	6470	3527	3547	8932	8932					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2507202029228	2	408.25156	814.488568	1.8949	0.00077359	-0.3079	-0.0001257	1.587	0.00064789	408.2512830548643	67.618	0.64789	67.94	67.44	68.088	0.32268					42	20	3	0	0	0	0.89051	4	28164	28164;28217;28265;28317		2.3027	0	1	2770400			7158	6470	3527	3547	8933;8934;8935;8936	8933					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2514221072197	2	408.25156	814.488568	1.7048	0.000696	-0.15609	-6.3724E-05	1.5487	0.00063228	408.25135003930853	68.568	0.49734	68.891	68.597	69.094	0.32224					39	15	3	0	0	0	0.89051	3	28628	28628;28668;28757		2.3027	2.3027	1	11247000			7159	6470	3527	3547	8937;8938;8939	8937					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2519409060478	2	408.25156	814.488568	1.6112	0.00065778	0.74053	0.00030232	2.3518	0.00096011	408.2516792617374	66.479	0.67468	67.868	67.478	68.153	1.3887					45	21	3	0	0	0	0.89051	1	27905	27905		2.3027	0	1	2939200			7160	6470	3527	3547	8940	8940					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2521240115166	2	408.25156	814.488568	1.5761	0.00064345	-0.036432	-1.4873E-05	1.5397	0.00062857	408.251393618327	67.588	0.51806	68.966	68.724	69.242	1.3778					42	16	4	0	0	0	0.89051	3	28306	28306;28355;28411		2.3027	1.6124	1	6217400			7161	6470	3527	3547	8941;8942;8943	8941					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2523986697197	2	408.25156	814.488568	1.6308	0.0006658	0.07358	3.0039E-05	1.7044	0.00069584	408.25143738117913	66.207	0.65449	68.096	67.687	68.341	1.8889					32	20	2	0	0	0	0.89051	1	27787	27787		2.3027	1.5091	1	2214200			7162	6470	3527	3547	8944	8944					0.07390293117066449
GGKGKGRR	8	Unmodified	_GGKGKGRR_					0	0	0		ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	ENST00000426538.6_1_16:58439143-58439287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2502929568291	2	408.25156	814.488568	1.1176	0.00045626	-0.32532	-0.00013281	0.79228	0.00032345	408.2513192513237	67.239	0.48973	69.128	68.828	69.318	1.8889					34	15	3	0	0	0	0.89051	3	28167	28167;28212;28267		2.3027	1.6124	1	6576100			7163	6470	3527	3547	8945;8946;8947	8945					0.07390293117066449
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.7130920290947	2	359.713945	717.413337	-0.59868	-0.00021535	-0.19288	-6.9381E-05	-0.79156	-0.00028473	359.71341175550793	60.154	0.43298	60.154	59.915	60.348	0					24	14	2	0	0	0	0.89051	2	25047	25047;25091		2.3027	1.6124	1	7022300	+		7164	9074	3528	3548	8948;8949	8948					0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.7137023806572	2	359.713945	717.413337	2.0362	0.00073245	-2.6815	-0.00096456	-0.64527	-0.00023211	359.712798780091	59.947	0.50755	60.275	59.997	60.505	0.32809					32	16	3	0	0	0	0.89051	3	25068	25068;25116;25167		2.3027	1.6124	1	5935400	+		7165	9074	3528	3548	8950;8951;8952	8950					0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7130309939384	2	359.713945	717.413337	0.71422	0.00025692	-2.2413	-0.00080621	-1.527	-0.00054929	359.71294384684614	58.916	0.42614	60.336	60.1	60.527	1.4196					20	13	2	0	0	0	0.89051	2	24695	24695;24742		2.3027	1.6124	1	6147200	+		7166	9074	3528	3548	8953;8954	8953					0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.7130309939384	2	359.713945	717.413337	1.4094	0.00050698	-2.3276	-0.00083726	-0.91818	-0.00033028	359.71266415341984	58.558	0.44758	60.527	60.247	60.694	1.969					27	14	3	0	0	0	0.89051	2	24524	24524;24571		2.3027	1.6124	1	6897200	+		7167	9074	3528	3548	8955;8956	8955					0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	359.713945	717.413337	-0.59868	-0.00021535	-0.19288	-6.9381E-05	-0.79156	-0.00028473	359.71341175550793	60.154	0.43298	60.154	59.915	60.348	0	-0.16916	0.0013689	NaN	2.3027	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7022300	+		7168	9074	3528	3548							0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	359.713945	717.413337	2.0362	0.00073245	-2.6815	-0.00096456	-0.64527	-0.00023211	359.712798780091	59.947	0.50755	60.275	59.997	60.505	0.32809	-0.048185	-0.00042142	NaN	2.3027	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5935400	+		7169	9074	3528	3548							0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	359.713945	717.413337	0.71422	0.00025692	-2.2413	-0.00080621	-1.527	-0.00054929	359.71294384684614	58.916	0.42614	60.336	60.1	60.527	1.4196	0.013141	-0.00010472	NaN	2.3027	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6147200	+		7170	9074	3528	3548							0.04332690865987843
GGKGKGSK	8	Unmodified	_GGKGKGSK_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	359.713945	717.413337	1.4094	0.00050698	-2.3276	-0.00083726	-0.91818	-0.00033028	359.71266415341984	58.558	0.44758	60.527	60.247	60.694	1.969	0.20421	-0.00016683	NaN	2.3027	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6897200	+		7171	9074	3528	3548							0.04332690865987843
GGKGRKRT	8	Unmodified	_GGKGRKRT_					0	0	0		ENST00000257663.3_1_7:77423607-77427674:-|nuORF	ENST00000257663.3_1_7:77423607-77427674:-|nuORF	ENST00000257663.3_1_7:77423607-77427674:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2662231326103	2	430.264668	858.514782	1.5889	0.00068365	-0.36259	-0.00015601	1.2263	0.00052764	430.2644195901726	70.469	0.49104	72.307	72.041	72.532	1.8378					37	15	3	0	0	0	0.89178	1	29524	29524		0.69038	0	1	8051300			7172	5606	3529	3549	8957	8957					0.07986562288544974
GGKGTLRH	8	Unmodified	_GGKGTLRH_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|108|2|sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|108|2|sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|108|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2383911013603	2	413.238119	824.461684	0.52111	0.00021534	0.40259	0.00016636	0.9237	0.00038171	413.23829808419526	71.918	0.47409	71.918	71.668	72.142	0					40	14	4	0	0	0	0.88791	1	29970	29970		3.9444	1.8846	1	11279000			7173	7732	3530	3550	8958	8958					0.04243184505901354
GGKGYWTW	8	Unmodified	_GGKGYWTW_					0	0	0			REV__ENST00000570209.1_1_15:31107479-31108768:+|nuORF	REV__ENST00000570209.1_1_15:31107479-31108768:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	318.1930419802666	3	318.82046	953.439552	-2.0989	-0.00066916	-3.2725	-0.0010434	-5.3714	-0.0017125	318.82117462190615	56.696	0.52466	56.696	56.286	56.81	0					38	17	5	0	0	0	2.3239	1	23529	23529		0.40072	0	1	2724400	+		7174	13962	3531	3551	8959	8959					-0.03903039962528965
GGKIFWLIP	9	Unmodified	_GGKIFWLIP_					0	0	0		KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant;nc|ENSG00000089094|Q8NHM5-5|KDM2B;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;ENSG00000089094|ENST00000377071|KDM2B;ENST00000541318.1_1_12:121954314-121973995:-|nuORF	KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant	KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2061340212822	3	344.207656	1029.60114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.544	1	77.86	77.36	78.36	0.31653								0	0	0	0.42693	1	32427	32427		1.0715	0.61312	1				7175	1118	3532	3552	8960	8960					0.08752129070558112
GGKKEGIT	8	Unmodified	_GGKKEGIT_					0	0	0			REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	395.2258788943291	2	395.226885	788.439217	0.018043	7.1312E-06	-2.3702	-0.00093677	-2.3522	-0.00092964	395.22582885063474	67.213	0.57988	67.213	66.924	67.504	0					40	18	3	0	0	0	0.8873	1	28012	28012		4.3292	2.0265	1	14824000	+		7176	15877	3533	3553	8961	8961					0.03653540317623083
GGKKEGIT	8	Unmodified	_GGKKEGIT_					0	0	0			REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	395.226885	788.439217	0.018043	7.1312E-06	-2.3702	-0.00093677	-2.3522	-0.00092964	395.22582885063474	67.213	0.57988	67.213	66.924	67.504	0	-0.207	9.9999E-05	NaN	4.3292	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14824000	+		7177	15877	3533	3553							0.03653540317623083
GGKKEGIT	8	Unmodified	_GGKKEGIT_					0	0	0			REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	395.226885	788.439217	1.8643	0.0007368	-3.5008	-0.0013836	-1.6366	-0.00064682	395.22525371852765	67.037	0.49307	67.36	67.126	67.619	0.32269	-0.060107	-0.00079371	NaN	4.3292	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13356000	+		7178	15877	3533	3553							0.03653540317623083
GGKKEGIT	8	Unmodified	_GGKKEGIT_					0	0	0			REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	REV__tr|A0A7D7A4X8|A0A7D7A4X8_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	395.226885	788.439217	1.5932	0.00062968	-2.1543	-0.00085143	-0.56106	-0.00022175	395.225989778449	65.756	0.51432	67.664	67.344	67.858	1.9085	0.24427	0.00027068	NaN	4.3292	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6160900	+		7179	15877	3533	3553							0.03653540317623083
GGKKGGGGE	9	Unmodified	_GGKKGGGGE_					0	0	0			REV__ENSG00000264424|ENST00000255381|MYH4	REV__ENSG00000264424|ENST00000255381|MYH4	MSMS	GG20161007_CRH_Patient100_W632_02	4	373.6932250857353	2	373.69321	745.371866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.373	1	53.348	52.848	53.848	1.9753								0	0	0	0.42693	1	21529	21529		1.8442	1.0506	1		+		7180	11992	3534	3554	8962	8962					-0.011004898933265395
GGKKGGKVI	9	Unmodified	_GGKKGGKVI_					0	0	0			REV__tr|A0A7D6ZEZ4|A0A7D6ZEZ4_9CLOTFlavodoxinfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12900PE=4SV=1	REV__tr|A0A7D6ZEZ4|A0A7D6ZEZ4_9CLOTFlavodoxinfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2681152224541	2	422.27417	842.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.86	1	83.13	82.63	83.63	0.27029								0	0	0	0.42693	1	34652	34652		1.8442	1.1539	1		+		7181	15625	3535	3555	8963	8963					0.10622098859607831
GGKKKKKK	8	Unmodified	_GGKKKKKK_					0	0	0		nc|ENSG00000133226|Q8IYB3-2|SRRM1;ENSG00000133226|ENST00000323848|SRRM1	nc|ENSG00000133226|Q8IYB3-2|SRRM1;REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.2124511599541	3	301.215033	900.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.143	1	97.143	96.643	97.643	0								0	0	0	1.0178	1	40613	40613		0.40072	0.40072	1				7182	11222;2565	3536	3556	8964	8964					0.1689835353898843
GGKKKKKK	8	Unmodified	_GGKKKKKK_					0	0	0		nc|ENSG00000133226|Q8IYB3-2|SRRM1;ENSG00000133226|ENST00000323848|SRRM1	nc|ENSG00000133226|Q8IYB3-2|SRRM1;REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1284973025322	3	301.215033	900.62327	-2.5466	-0.00076706	-1.4517	-0.00043728	-3.9983	-0.0012043	301.21464118889406	34.528	0.65491	34.528	34.308	34.963	0					29	20	2	0	0	0	2.3239	1	14466	14466		0	0	1	705760			7183	11222;2565	3536	3556	8965	8965					0.1689835353898843
GGKKKPPSTT	10	Unmodified	_GGKKKPPSTT_					0	0	0		sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1;sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1995117068291	3	334.197708	999.571294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.129	1	97.413	96.913	97.913	0.28442								0	0	0	0.66176	1	40867	40867		0.62683	0.16849	1				7184	15997	3537	3557	8966	8966					0.07149145334562945
GGKKQAGW	8	Unmodified	_GGKKQAGW_					0	0	0		ENST00000409304.5_1_2:224840371-224840428:-|nuORF	ENST00000409304.5_1_2:224840371-224840428:-|nuORF	ENST00000409304.5_1_2:224840371-224840428:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2279540896416	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.863	1	35.138	34.638	35.638	1.2746								0	0	0	1.0178	1	14212	14212		2.3027	0	1				7185	6379	3538	3558	8967	8967					0.017883797573290394
GGKLLVPG	8	Unmodified	_GGKLLVPG_					0	0	0		ENST00000555128.5_3_14:23938970-23939105:+|nuORF	ENST00000555128.5_3_14:23938970-23939105:+|nuORF	ENST00000555128.5_3_14:23938970-23939105:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1017333865166	2	370.736889	739.459225	1.9911	0.00073817	-0.4042	-0.00014985	1.5869	0.00058832	370.7358127860868	62.972	0.65167	64.916	64.628	65.279	1.9444					29	20	2	0	0	0	2.3239	1	26479	26479		0.69038	0	1	491320			7186	7293	3539	3559	8968	8968					0.07907336048231173
GGKLSIPV	8	Unmodified	_GGKLSIPV_					0	0	0		ENST00000602875.5_1_5:139930287-139937028:-|nuORF;ENSG00000213523|ENST00000336283|SRA1	ENST00000602875.5_1_5:139930287-139937028:-|nuORF	ENST00000602875.5_1_5:139930287-139937028:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1537658572197	2	385.742171	769.469789	1.8359	0.00070819	4.1693	0.0016083	6.0052	0.0023165	385.74338745148333	77.944	0.44683	78.254	77.974	78.42	0.30933					29	13	3	0	0	0	2.3239	1	32630	32630		0.69038	0	1	1514600			7187	5222	3540	3560	8969	8969					0.0758331870266602
GGKLTKIAVPI	11	Unmodified	_GGKLTKIAVPI_					0	0	0			REV__ENSG00000080224|ENST00000389672|EPHA6	REV__ENSG00000080224|ENST00000389672|EPHA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2408019900322	3	366.241137	1095.70158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.345	1	63.675	63.175	64.175	0.32974								0	0	0	0.63775	1	26538	26538		3.8459	0.77364	1		+		7188	8805	3541	3561	8970	8970					0.15755741333555306
GGKMCCCS	8	Unmodified	_GGKMCCCS_					0	0	0			REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5570556521416	2	394.631537	787.248522	1.5792	0.0006232	0.10805	4.264E-05	1.6872	0.00066584	394.63160813215995	45.409	1.1745	46.774	46.433	47.608	1.3653					58	36	2	0	0	0	2.3239	1	18888	18888		0.69038	0.69038	1	15814000	+		7189	12702	3542	3562	8971	8971					-0.15361271923632103
GGKMCCCS	8	Unmodified	_GGKMCCCS_					0	0	0			REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5574218630791	2	394.631537	787.248522	1.4512	0.00057271	0.255	0.00010063	1.7062	0.00067334	394.63163644328915	46.72	1.4233	48.102	47.624	49.047	1.3816					65	44	2	0	0	0	2.3239	1	19878	19878		0.69038	0.69038	1	8207300	+		7190	12702	3542	3562	8972	8972					-0.15361271923632103
GGKMCCCS	8	Unmodified	_GGKMCCCS_					0	0	0			REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	395.2079650759697	2	394.631537	787.248522	1.5215	0.00060042	0.19137	7.552E-05	1.7128	0.00067594	394.63161870338166	46.371	1.5173	48.341	47.912	49.43	1.9703					63	48	2	0	0	0	2.3239	1	19277	19277		2.5775	2.5775	1	10392000	+		7191	12702	3542	3562	8973	8973					-0.15361271923632103
GGKMCCCS	8	Unmodified	_GGKMCCCS_					0	0	0			REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	394.631537	787.248522	1.783	0.00070364	-0.089346	-3.5259E-05	1.6937	0.00066838	394.63152875572905	48.117	1.5693	48.448	47.989	49.558	0.33034	0.15075	-0.00017017	NaN	0.69038	70	51	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9913600	+		7192	12702	3542	3562							-0.15361271923632103
GGKMCCCS	8	Unmodified	_GGKMCCCS_					0	0	0			REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	REV__ENST00000374140.6_1_9:116279839-116285210:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	394.631537	787.248522	1.5661	0.00061805	0.039552	1.5608E-05	1.6057	0.00063366	394.6315729941189	44.949	1.2637	46.909	46.608	47.871	1.9596	0.067407	-1.9262E-05	NaN	0.69038	64	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16618000	+		7193	12702	3542	3562							-0.15361271923632103
GGKNKKKV	8	Unmodified	_GGKNKKKV_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A;REV__TOP2A-STAU1|1|fusion	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	429.2364379763603	2	429.779619	857.544686	1.2725	0.00054689	-2.2484	-0.00096631	-0.97591	-0.00041943	429.7783894719662	52.146	2.798	52.146	51.354	54.152	0					124	91	2	0	0	0	2.3239	1	22543	22543		5.2307	4.437	1	4211400	+		7194	9826;14680	3543	3563	8974	8974					0.1102150123389265
GGKNKQRL	8	Unmodified	_GGKNKQRL_					0	0	0			REV__ENST00000333775.9_1_17:7761025-7761136:-|nuORF	REV__ENST00000333775.9_1_17:7761025-7761136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7735778689384	2	450.772326	899.530098	3.0103	0.0013569	0.13287	5.9893E-05	3.1431	0.0014168	450.77225736177206	84.16	0.47337	84.421	84.156	84.629	0.26083					36	14	3	0	0	0	0.89156	1	35260	35260		2.3027	2.3027	1	6340300	+		7195	12458	3544	3564	8975	8975					0.07631429085756736
GGKRKHLPR	9	Unmodified	_GGKRKHLPR_					0	0	0			REV__ENSG00000152804|ENST00000282728|HHEX	REV__ENSG00000152804|ENST00000282728|HHEX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8298217654228	2	524.827966	1047.64138	2.7901	0.0014643	-0.85865	-0.00045064	1.9315	0.0010137	524.8275843120056	82.998	0.68253	84.211	83.889	84.572	1.2125					76	21	5	0	0	0	0.83753	1	34789	34789		1.8442	1.8442	1	80288000	+		7196	10435	3545	3565	8976	8976					0.11946488513672193
GGKRLRGV	8	Unmodified	_GGKRLRGV_					0	0	0		EEF1B2|p.E26Gfs*19|1|0.39|ENSG00000114942|chr2:206160053-206160054|-/TGGAGGGAAACGCCTC|frameshift_variant	EEF1B2|p.E26Gfs*19|1|0.39|ENSG00000114942|chr2:206160053-206160054|-/TGGAGGGAAACGCCTC|frameshift_variant	EEF1B2|p.E26Gfs*19|1|0.39|ENSG00000114942|chr2:206160053-206160054|-/TGGAGGGAAACGCCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7711669802666	2	421.769586	841.524619	2.5471	0.0010743	1.0478	0.00044191	3.5949	0.0015162	421.7697671446244	80.297	0.7689	81.548	81.232	82.001	1.2512					57	24	4	0	0	0	0.89051	1	33711	33711		2.3027	1.5091	1	3784700			7197	440	3546	3566	8977	8977					0.0975175029394677
GGKRRRKL	8	Unmodified	_GGKRRRKL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;PHTF2|p.G313Efs*3|1|0.48|ENSG00000006576|chr7:77920439-77920439|G/-|frameshift_variant;PHTF2|p.H252Lfs*65|1|0.04|ENSG00000006576|chr7:77910387-77910388|-/TG|frameshift_variant;ENST00000454592.5_1_7:77538159-77567164:+|nuORF;nc|ENSG00000006576|Q8N3S3-6|PHTF2;nc|ENSG00000006576|Q8N3S3-5|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2;nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2174865603447	3	324.217548	969.630815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.192	1	92.173	91.673	92.673	0.98157								0	0	0	1.0178	1	38409	38409		0.40072	0	1				7198	509	3547	3567	8978	8978					0.14478505859267443
GGKRRRKL	8	Unmodified	_GGKRRRKL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;PHTF2|p.G313Efs*3|1|0.48|ENSG00000006576|chr7:77920439-77920439|G/-|frameshift_variant;PHTF2|p.H252Lfs*65|1|0.04|ENSG00000006576|chr7:77910387-77910388|-/TG|frameshift_variant;ENST00000454592.5_1_7:77538159-77567164:+|nuORF;nc|ENSG00000006576|Q8N3S3-6|PHTF2;nc|ENSG00000006576|Q8N3S3-5|PHTF2;nc|ENSG00000006576|Q8N3S3-7|PHTF2;nc|ENSG00000006576|Q8N3S3-4|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MSMS	GG20161007_CRH_Patient100_W632_02	4	324.2180663943291	3	324.217548	969.630815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.254	1	23.87	23.37	24.37	1.6158								0	0	0	1.0178	1	9284	9284		0.40072	0	1				7199	509	3547	3567	8979	8979					0.14478505859267443
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2270995974541	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.283	1	75.283	74.783	75.783	0								0	0	0	1.0178	1	31342	31342		2.3027	1.6124	1				7200	1556	3548	3568	8980	8980					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2285339236259	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.654	1	76.654	76.154	77.154	0								0	0	0	1.0178	1	31912	31912		2.3027	1.6124	1				7201	1556	3548	3568	8981	8981					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2288696169853	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.634	1	78.634	78.134	79.134	0								0	0	0	1.0178	1	32733	32733		2.3027	1.6124	1				7202	1556	3548	3568	8982	8982					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2283203005791	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.222	1	80.222	79.722	80.722	0								0	0	0	1.0178	1	33406	33406		2.3027	1.6124	1				7203	1556	3548	3568	8983	8983					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2290527224541	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.291	1	81.291	80.791	81.791	0								0	0	0	1.0178	1	33851	33851		2.3027	1.6124	1				7204	1556	3548	3568	8984	8984					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2284118533134	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.452	1	81.452	80.952	81.952	0								0	0	0	1.0178	1	33920	33920		2.3027	1.6124	1				7205	1556	3548	3568	8985	8985					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2282287478447	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.744	1	81.744	81.244	82.244	0								0	0	0	1.0178	1	34049	34049		2.3027	1.6124	1				7206	1556	3548	3568	8986	8986					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278930544853	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.93	1	73.255	72.755	73.755	0.32494								0	0	0	1.0178	1	30508	30508		2.3027	1.6124	1				7207	1556	3548	3568	8987	8987					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284423708916	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.497	1	73.822	73.322	74.322	0.32494								0	0	0	1.0178	1	30751	30751		2.3027	1.6124	1				7208	1556	3548	3568	8988	8988					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285339236259	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.49	1	79.791	79.291	80.291	0.30047								0	0	0	1.0178	1	33235	33235		2.3027	1.6124	1				7209	1556	3548	3568	8989	8989					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2279846072197	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.562	1	81.842	81.342	82.342	0.2802								0	0	0	1.0178	1	34102	34102		2.3027	1.6124	1				7210	1556	3548	3568	8990	8990					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2284118533134	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.5	1	83.771	83.271	84.271	0.27029								0	0	0	1.0178	1	34922	34922		2.3027	1.6124	1				7211	1556	3548	3568	8991	8991					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2282897830009	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.269	1	86.517	86.017	87.017	0.24876								0	0	0	1.0178	1	36077	36077		2.3027	1.6124	1				7212	1556	3548	3568	8992	8992					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2289001345634	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.862	1	89.918	89.418	90.418	1.0562								0	0	0	1.0178	1	37457	37457		2.3027	1.6124	1				7213	1556	3548	3568	8993	8993					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2306396365166	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.222	1	94.963	94.463	95.463	0.74124								0	0	0	1.0178	1	39646	39646		2.3027	1.6124	1				7214	1556	3548	3568	8994	8994					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2287780642509	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.062	1	74.872	74.372	75.372	1.8101								0	0	0	1.0178	1	30649	30649		2.3027	1.6124	1				7215	1556	3548	3568	8995	8995					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2296325564384	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.097	1	89.543	89.043	90.043	1.4467								0	0	0	1.0178	1	37132	37132		2.3027	1.6124	1				7216	1556	3548	3568	8996	8996					0.05100379757323026
GGKSLARA	8	Unmodified	_GGKSLARA_					0	0	0		ENST00000434755.5_1_7:30468991-30485839:-|nuORF;NOD1|p.Q907Rfs*20|1|0.04|ENSG00000106100|chr7:30429444-30429444|G/-|frameshift_variant;nc|ENSG00000106100|Q9Y239-3|NOD1;ENSG00000106100|ENST00000222823|NOD1	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	ENST00000434755.5_1_7:30468991-30485839:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2301208376884	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.225	1	89.672	89.172	90.172	1.4467								0	0	0	1.0178	1	37184	37184		2.3027	1.6124	1				7217	1556	3548	3568	8997	8997					0.05100379757323026
GGKSRGGG	8	Unmodified	_GGKSRGGG_					0	0	0		ENST00000253251.12_1_1:10093057-10093417:+|nuORF	ENST00000253251.12_1_1:10093057-10093417:+|nuORF	ENST00000253251.12_1_1:10093057-10093417:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.1810485720634	2	338.180269	674.345986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.194	1	94.194	93.694	94.694	0								0	0	0	1.0178	1	39364	39364		0.69038	0	1				7218	5589	3549	3569	8998	8998					-0.0042133934493904235
GGKVGGGV	8	Unmodified	_GGKVGGGV_					0	0	0		ENST00000392547.6_1_2:175427025-175427217:-|nuORF	ENST00000392547.6_1_2:175427025-175427217:-|nuORF	ENST00000392547.6_1_2:175427025-175427217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	315.6830322146416	2	315.682114	629.349674	-0.035307	-1.1146E-05	2.4263	0.00076593	2.391	0.00075478	315.68295041682944	25.604	0.24615	27.321	27.245	27.492	1.7167					14	7	3	0	0	0	0.89051	1	10730	10730		2.3027	0	1	986850			7219	6258	3550	3570	8999	8999					0.020173304289073712
GGKVISPP	8	Unmodified	_GGKVISPP_					0	0	0		ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7255126833916	2	377.726521	753.438489	-0.22885	-8.6442E-05	-1.5261	-0.00057644	-1.7549	-0.00066288	377.72563865433824	64.254	0.90953	64.254	63.651	64.56	0					48	28	3	0	0	0	0.89178	1	26854	26854		0.69038	0	1	3488400			7220	5892	3551	3571	9000	9000					0.05190745668562613
GGKVISPP	8	Unmodified	_GGKVISPP_					0	0	0		ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7255737185478	2	377.726521	753.438489	-0.34093	-0.00012878	-1.4922	-0.00056364	-1.8331	-0.00069242	377.725753156684	65.238	0.53604	65.238	64.946	65.482	0					45	16	4	0	0	0	0.89178	1	27266	27266		0.69038	0	1	10996000			7221	5892	3551	3571	9001	9001					0.05190745668562613
GGKVISPP	8	Unmodified	_GGKVISPP_					0	0	0		ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	ENST00000331203.6_1_2:112896141-112922743:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7263366580009	2	377.726521	753.438489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.504	1	63.504	63.004	64.004	0								0	0	0	1.0178	1	26474	26474		0.69038	0	1				7222	5892	3551	3571	9002	9002					0.05190745668562613
GGKVKPAA	8	Unmodified	_GGKVKPAA_					0	0	0			REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2260619997978	2	364.226688	726.438824	1.8224	0.00066378	-3.1995	-0.0011653	-1.377	-0.00050155	364.2255472779017	61.42	0.43278	61.75	61.516	61.949	0.32974					27	13	3	0	0	0	0.89051	1	25711	25711		2.3027	1.6124	1	5875500	+		7223	8095	3552	3572	9003	9003					0.06466165388417267
GGKVKPAA	8	Unmodified	_GGKVKPAA_					0	0	0			REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	364.226688	726.438824	1.8224	0.00066378	-3.1995	-0.0011653	-1.377	-0.00050155	364.2255472779017	61.42	0.43278	61.75	61.516	61.949	0.32974	-0.12159	-0.00013346	NaN	2.3027	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5875500	+		7224	8095	3552	3572							0.06466165388417267
GGKVKPAA	8	Unmodified	_GGKVKPAA_					0	0	0			REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	364.226688	726.438824	1.8773	0.00068376	-2.7638	-0.0010067	-0.88654	-0.0003229	364.22578516344123	60.41	0.4325	61.83	61.626	62.059	1.4196	-0.041616	0.00018387	NaN	2.3027	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2912800	+		7225	8095	3552	3572							0.06466165388417267
GGKVKPAA	8	Unmodified	_GGKVKPAA_					0	0	0			REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	REV__AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	364.226688	726.438824	2.7698	0.0010088	-3.0144	-0.0010979	-0.24464	-8.9105E-05	364.2256054076636	60.07	0.37589	62.035	61.854	62.23	1.9653	0.16321	1.3472E-06	NaN	2.3027	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3766500	+		7226	8095	3552	3572							0.06466165388417267
GGKWSFDDWSV	11	Unmodified	_GGKWSFDDWSV_					0	0	0		nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	321.9808532595634	4	321.647739	1282.56185	1.5386	0.00049489	-0.40191	-0.00012928	1.1367	0.00036562	321.6474786907515	56.261	0.92356	56.582	56.308	57.231	0.32103					50	31	3	0	0	0	0.14606	1	23746	23746		0.073264	0.073264	1	2422800			7227	7849	3553	3573	9004	9004					-0.0681266774163305
GGKWSFDDWSV	11	Unmodified	_GGKWSFDDWSV_					0	0	0		nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	nc|ENSG00000107949|Q9P287-3|BCCIP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	321.647739	1282.56185	1.4507	0.00046661	-2.946	-0.00094759	-1.4953	-0.00048097	321.8971934059152	54.379	0.37099	56.347	56.096	56.467	1.9684	-0.11735	-0.0022617	NaN	0.073264	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3521400			7228	7849	3553	3573							-0.0681266774163305
GGLELTPPV	9	Unmodified	_GGLELTPPV_					0	0	0		nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.7521850466728	2	441.750193	881.485833	1.7624	0.00077853	1.3775	0.00060851	3.1399	0.001387	441.7506086089048	69.728	0.6557	70.05	69.847	70.503	0.32224					28	20	2	0	0	0	0.7849	1	29248	29248		3.9444	1.3669	1	542130			7229	1005	3554	3574	9005	9005					0.04034980148901468
GGNFGFGDSR	10	Unmodified	_GGNFGFGDSR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000495810.1_1_7:26235422-26236427:-|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2271606326103	2	507.225405	1012.43626	1.4576	0.00073932	0.2484	0.00012599	1.706	0.00086531	507.2257142041454	22.422	0.2557	23.599	23.476	23.731	1.177					13	7	2	0	0	0	0.44353	2	9363	9363;9412		30.703	20.63	1	741910			7230	2162	3555	3575	9006;9007	9006					-0.06946334807196308
GGNFGFGDSR	10	Unmodified	_GGNFGFGDSR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000495810.1_1_7:26235422-26236427:-|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2244140505791	2	507.225405	1012.43626	0.57184	0.00029005	0.24266	0.00012308	0.81451	0.00041314	507.2252757164759	22.1	0.25192	23.716	23.548	23.8	1.6158					18	7	3	0	0	0	0.36152	1	9205	9205		35.612	22.104	1	839060			7231	2162	3555	3575	9008	9008					-0.06946334807196308
GGNFGFGDSR	10	Unmodified	_GGNFGFGDSR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000495810.1_1_7:26235422-26236427:-|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2267028689384	2	507.225405	1012.43626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.197	1	23.813	23.313	24.313	1.6158								0	0	0	0.65149	1	9260	9260		12.873	8.9282	1				7232	2162	3555	3575	9009	9009					-0.06946334807196308
GGPGFPGA	8	Unmodified	_GGPGFPGA_					0	0	0		nc|ENSG00000139219|P02458-1|COL2A1;COL2A1|p.C1438Afs*33|1|0.26|ENSG00000139219|chr12:47974095-47974095|G/-|frameshift_variant;ENSG00000139219|ENST00000380518|COL2A1	nc|ENSG00000139219|P02458-1|COL2A1	nc|ENSG00000139219|P02458-1|COL2A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	659.3156005740166	1	659.314751	658.307475	2.6724	0.001762	0.16943	0.00011171	2.8419	0.0018737	659.3141660617171	103.9	0.094635	103.96	103.92	104.01	0.059502					11	4	3	0	0	0	0.89176	1	43700	43700		0.79363	0	1	49752000			7233	320	3556	3576	9010	9010					-0.035346449794701584
GGPGFPGA	8	Unmodified	_GGPGFPGA_					0	0	0		nc|ENSG00000139219|P02458-1|COL2A1;COL2A1|p.C1438Afs*33|1|0.26|ENSG00000139219|chr12:47974095-47974095|G/-|frameshift_variant;ENSG00000139219|ENST00000380518|COL2A1	nc|ENSG00000139219|P02458-1|COL2A1	nc|ENSG00000139219|P02458-1|COL2A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	659.314751	658.307475	1.4869	0.00098031	1.0491	0.00069166	2.5359	0.001672	659.3151281492878	103.94	0.095139	103.94	103.88	103.97	0	-0.020066	0.00049311	NaN	0.79363	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41421000			7234	320	3556	3576							-0.035346449794701584
GGPGSVLL	8	Unmodified	_GGPGSVLL_					0	0	0		ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2059814333916	2	350.205421	698.39629	0.8532	0.0002988	3.4825	0.0012196	4.3357	0.0015184	350.2064603781969	31.782	1.0442	32.072	31.449	32.494	0.29086					56	33	2	0	0	0	0.89178	1	13358	13358		0.69038	0	1	1695400			7235	6276	3557	3577	9011	9011					0.03502770260206489
GGPGSVLL	8	Unmodified	_GGPGSVLL_					0	0	0		ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2062560915947	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89178	1	13800	13800		0.69038	0	1	2241600			7236	6276	3557	3577	9012	9012					0.03502770260206489
GGPGSVLL	8	Unmodified	_GGPGSVLL_					0	0	0		ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.1816894412041	2	350.205421	698.39629	1.3621	0.00047703	4.4861	0.0015711	5.8482	0.0020481	350.20700870565395	44.708	0.50134	46.073	45.836	46.337	1.3653					22	15	2	0	0	0	2.3239	1	18840	18840		2.5775	0	1	922780			7237	6276	3557	3577	9013	9013					0.03502770260206489
GGPGSVLL	8	Unmodified	_GGPGSVLL_					0	0	0		ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	ENST00000393881.7_1_17:40172139-40173590:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.2056457400322	2	350.205421	698.39629	0.36994	0.00012956	1.316	0.00046088	1.686	0.00059044	350.20545594093073	30.022	0.58441	31.837	31.615	32.199	1.8151					27	18	2	0	0	0	0.89178	1	12607	12607		0.69038	0	1	2434200			7238	6276	3557	3577	9014	9014					0.03502770260206489
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1801330447197	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.091	1	52.091	51.591	52.591	0								0	0	0	1.0178	1	21727	21727		0.79363	0.19213	1		+		7239	8212	3558	3578	9015	9015					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.212	1	52.212	51.712	52.712	0								0	0	0	1.0178	1	21777	21777		0.79363	0.19213	1		+		7240	8212	3558	3578	9016	9016					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1802551150322	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.5	1	52.5	52	53	0								0	0	0	1.0178	1	21895	21895		0.79363	0.19213	1		+		7241	8212	3558	3578	9017	9017					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1806518435478	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.595	1	52.595	52.095	53.095	0								0	0	0	1.0178	1	21935	21935		0.79363	0.79363	1		+		7242	8212	3558	3578	9018	9018					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.714	1	52.714	52.214	53.214	0								0	0	0	1.0178	1	21984	21984		0.79363	0.79363	1		+		7243	8212	3558	3578	9019	9019					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807433962822	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.808	1	52.808	52.308	53.308	0								0	0	0	1.0178	1	22023	22023		0.79363	0.79363	1		+		7244	8212	3558	3578	9020	9020					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1806823611259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.903	1	52.903	52.403	53.403	0								0	0	0	1.0178	1	22062	22062		0.79363	0.79363	1		+		7245	8212	3558	3578	9021	9021					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1810180544853	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.099	1	61.099	60.599	61.599	0								0	0	0	1.0178	1	25477	25477		0.79363	0.19213	1		+		7246	8212	3558	3578	9022	9022					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.193	1	61.193	60.693	61.693	0								0	0	0	1.0178	1	25516	25516		0.79363	0.79363	1		+		7247	8212	3558	3578	9023	9023					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807739138603	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.286	1	61.286	60.786	61.786	0								0	0	0	1.0178	1	25554	25554		0.79363	0.79363	1		+		7248	8212	3558	3578	9024	9024					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1806823611259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.379	1	61.379	60.879	61.879	0								0	0	0	1.0178	1	25593	25593		0.79363	0.79363	1		+		7249	8212	3558	3578	9025	9025					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1806213259697	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.479	1	61.479	60.979	61.979	0								0	0	0	1.0178	1	25634	25634		0.79363	0.79363	1		+		7250	8212	3558	3578	9026	9026					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807433962822	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.571	1	61.571	61.071	62.071	0								0	0	0	1.0178	1	25672	25672		0.79363	0.79363	1		+		7251	8212	3558	3578	9027	9027					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.668	1	61.668	61.168	62.168	0								0	0	0	1.0178	1	25712	25712		0.79363	0.19213	1		+		7252	8212	3558	3578	9028	9028					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807128787041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.763	1	61.763	61.263	62.263	0								0	0	0	1.0178	1	25751	25751		0.79363	0.79363	1		+		7253	8212	3558	3578	9029	9029					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807128787041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.856	1	61.856	61.356	62.356	0								0	0	0	1.0178	1	25789	25789		0.79363	0.79363	1		+		7254	8212	3558	3578	9030	9030					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.95	1	61.95	61.45	62.45	0								0	0	0	1.0178	1	25828	25828		0.79363	0.79363	1		+		7255	8212	3558	3578	9031	9031					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805908083916	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.044	1	62.044	61.544	62.544	0								0	0	0	1.0178	1	25867	25867		0.79363	0.79363	1		+		7256	8212	3558	3578	9032	9032					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1797057986259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.164	1	98.164	97.664	98.664	0								0	0	0	1.0178	1	41043	41043		0.79363	0.79363	1		+		7257	8212	3558	3578	9033	9033					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1808044314384	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.295	1	98.295	97.795	98.795	0								0	0	0	1.0178	1	41101	41101		0.79363	0.10326	1		+		7258	8212	3558	3578	9034	9034					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1794006228447	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.138	1	35.437	34.937	35.937	0.29942								0	0	0	1.0178	1	14761	14761		0.79363	0	1		+		7259	8212	3558	3578	9035	9035					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1800109744072	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.413	1	35.713	35.213	36.213	0.29942								0	0	0	1.0178	1	14880	14880		0.79363	0	1		+		7260	8212	3558	3578	9036	9036					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1804992556572	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.384	1	47.714	47.214	48.214	0.33034								0	0	0	1.0178	1	19876	19876		0.79363	0.79363	1		+		7261	8212	3558	3578	9037	9037					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1803466677666	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.496	1	47.826	47.326	48.326	0.33034								0	0	0	1.0178	1	19924	19924		0.79363	0.79363	1		+		7262	8212	3558	3578	9038	9038					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1804382205009	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.588	1	47.919	47.419	48.419	0.33034								0	0	0	1.0178	1	19963	19963		0.79363	0.79363	1		+		7263	8212	3558	3578	9039	9039					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1806518435478	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.71	1	48.041	47.541	48.541	0.33034								0	0	0	1.0178	1	20013	20013		0.79363	0.79363	1		+		7264	8212	3558	3578	9040	9040					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1808654665947	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.818	1	48.149	47.649	48.649	0.33034								0	0	0	1.0178	1	20057	20057		0.79363	0.10326	1		+		7265	8212	3558	3578	9041	9041					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1807433962822	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.917	1	48.248	47.748	48.748	0.33034								0	0	0	1.0178	1	20097	20097		0.79363	0.79363	1		+		7266	8212	3558	3578	9042	9042					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1804382205009	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.023	1	48.353	47.853	48.853	0.33034								0	0	0	1.0178	1	20139	20139		0.79363	0.79363	1		+		7267	8212	3558	3578	9043	9043					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1804687380791	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.119	1	48.449	47.949	48.949	0.33034								0	0	0	1.0178	1	20178	20178		0.79363	0.79363	1		+		7268	8212	3558	3578	9044	9044					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1806518435478	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.212	1	48.543	48.043	49.043	0.33034								0	0	0	1.0178	1	20217	20217		0.79363	0.79363	1		+		7269	8212	3558	3578	9045	9045					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.512	1	48.842	48.342	49.342	0.33034								0	0	0	1.0178	1	20339	20339		0.79363	0.79363	1		+		7270	8212	3558	3578	9046	9046					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1807128787041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.605	1	48.936	48.436	49.436	0.33034								0	0	0	1.0178	1	20377	20377		0.79363	0.79363	1		+		7271	8212	3558	3578	9047	9047					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1809570193291	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.7	1	49.03	48.53	49.53	0.33034								0	0	0	1.0178	1	20416	20416		0.79363	0.79363	1		+		7272	8212	3558	3578	9048	9048					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1807739138603	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.82	1	49.151	48.651	49.651	0.33034								0	0	0	1.0178	1	20466	20466		0.79363	0.19213	1		+		7273	8212	3558	3578	9049	9049					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1808959841728	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.318	1	64.647	64.147	65.147	0.32899								0	0	0	1.0178	1	26944	26944		0.79363	0.19213	1		+		7274	8212	3558	3578	9050	9050					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.415	1	64.744	64.244	65.244	0.32899								0	0	0	1.0178	1	26983	26983		0.79363	0.19213	1		+		7275	8212	3558	3578	9051	9051					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1806518435478	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.515	1	64.844	64.344	65.344	0.32899								0	0	0	1.0178	1	27022	27022		0.79363	0.19213	1		+		7276	8212	3558	3578	9052	9052					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1804687380791	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.824	1	65.151	64.651	65.651	0.32689								0	0	0	1.0178	1	27152	27152		0.79363	0.79363	1		+		7277	8212	3558	3578	9053	9053					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1809570193291	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.92	1	65.247	64.747	65.747	0.32689								0	0	0	1.0178	1	27191	27191		0.79363	0.10326	1		+		7278	8212	3558	3578	9054	9054					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1798583865166	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.813	1	97.904	97.404	98.404	0.090881								0	0	0	1.0178	1	40927	40927		0.79363	0.79363	1		+		7279	8212	3558	3578	9055	9055					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1797668337822	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.064	1	98.155	97.655	98.655	0.090881								0	0	0	1.0178	1	41033	41033		0.79363	0.79363	1		+		7280	8212	3558	3578	9056	9056					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800720095634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.5	1	22.677	22.177	23.177	1.177								0	0	0	1.0178	1	8978	8978		0.79363	0.79363	1		+		7281	8212	3558	3578	9057	9057					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1799194216728	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.769	1	30.051	29.551	30.551	1.2825								0	0	0	1.0178	1	12063	12063		0.79363	0.79363	1		+		7282	8212	3558	3578	9058	9058					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1798278689384	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.874	1	30.157	29.657	30.657	1.2825								0	0	0	1.0178	1	12108	12108		0.79363	0.79363	1		+		7283	8212	3558	3578	9059	9059					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1803466677666	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.995	1	30.278	29.778	30.778	1.2825								0	0	0	1.0178	1	12160	12160		0.79363	0.10326	1		+		7284	8212	3558	3578	9060	9060					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800414919853	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.117	1	30.399	29.899	30.899	1.2825								0	0	0	1.0178	1	12212	12212		0.79363	0.79363	1		+		7285	8212	3558	3578	9061	9061					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1802551150322	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.235	1	30.517	30.017	31.017	1.2825								0	0	0	1.0178	1	12263	12263		0.79363	0.79363	1		+		7286	8212	3558	3578	9062	9062					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.468	1	30.751	30.251	31.251	1.2825								0	0	0	1.0178	1	12364	12364		0.79363	0.79363	1		+		7287	8212	3558	3578	9063	9063					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800720095634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.741	1	34.02	33.52	34.52	1.2782								0	0	0	1.0178	1	13732	13732		0.79363	0.79363	1		+		7288	8212	3558	3578	9064	9064					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1796142458916	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.039	1	34.317	33.817	34.817	1.2782								0	0	0	1.0178	1	13855	13855		0.79363	0.79363	1		+		7289	8212	3558	3578	9065	9065					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797363162041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.155	1	34.434	33.934	34.934	1.2782								0	0	0	1.0178	1	13903	13903		0.79363	0.79363	1		+		7290	8212	3558	3578	9066	9066					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800720095634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.278	1	34.556	34.056	35.056	1.2782								0	0	0	1.0178	1	13955	13955		0.79363	0.10326	1		+		7291	8212	3558	3578	9067	9067					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1806823611259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.01	1	47.385	46.885	47.885	1.3751								0	0	0	1.0178	1	19272	19272		0.79363	0.79363	1		+		7292	8212	3558	3578	9068	9068					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1803161501884	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.105	1	47.481	46.981	47.981	1.3751								0	0	0	1.0178	1	19311	19311		0.79363	0.79363	1		+		7293	8212	3558	3578	9069	9069					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1802245974541	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.328	1	47.703	47.203	48.203	1.3751								0	0	0	1.0178	1	19404	19404		0.79363	0.79363	1		+		7294	8212	3558	3578	9070	9070					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1801635622978	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.457	1	47.832	47.332	48.332	1.3751								0	0	0	1.0178	1	19460	19460		0.79363	0.79363	1		+		7295	8212	3558	3578	9071	9071					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1802551150322	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.005	1	58.419	57.919	58.919	1.4145								0	0	0	1.0178	1	23892	23892		0.79363	0.19213	1		+		7296	8212	3558	3578	9072	9072					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1809875369072	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.765	1	74.095	73.595	74.595	1.3297								0	0	0	1.0178	1	30540	30540		0.79363	0.79363	1		+		7297	8212	3558	3578	9073	9073					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1808349490166	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.888	1	74.217	73.717	74.717	1.3297								0	0	0	1.0178	1	30591	30591		0.79363	0.79363	1		+		7298	8212	3558	3578	9074	9074					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1811401247978	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.019	1	74.348	73.848	74.848	1.3297								0	0	0	1.0178	1	30646	30646		0.79363	0.10326	1		+		7299	8212	3558	3578	9075	9075					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1808654665947	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.25	1	83.463	82.963	83.963	1.2125								0	0	0	1.0178	1	34529	34529		0.79363	0.79363	1		+		7300	8212	3558	3578	9076	9076					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.349	1	83.562	83.062	84.062	1.2125								0	0	0	1.0178	1	34569	34569		0.79363	0.79363	1		+		7301	8212	3558	3578	9077	9077					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1816894412041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.453	1	83.665	83.165	84.165	1.2125								0	0	0	1.0178	1	34611	34611		0.79363	0.79363	1		+		7302	8212	3558	3578	9078	9078					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1810485720634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.573	1	83.786	83.286	84.286	1.2125								0	0	0	1.0178	1	34660	34660		0.79363	0.79363	1		+		7303	8212	3558	3578	9079	9079					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1810485720634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.665	1	83.878	83.378	84.378	1.2125								0	0	0	1.0178	1	34698	34698		0.79363	0.79363	1		+		7304	8212	3558	3578	9080	9080					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1816894412041	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.763	1	97.047	96.547	97.547	0.28442								0	0	0	1.0178	1	40715	40715		0.79363	0	1		+		7305	8212	3558	3578	9081	9081					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1821777224541	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.874	1	97.158	96.658	97.658	0.28442								0	0	0	1.0178	1	40761	40761		0.79363	0.79363	1		+		7306	8212	3558	3578	9082	9082					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1809570193291	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.105	1	97.389	96.889	97.889	0.28442								0	0	0	1.0178	1	40857	40857		0.79363	0.10326	1		+		7307	8212	3558	3578	9083	9083					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1799194216728	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.287	1	97.571	97.071	98.071	0.28442								0	0	0	1.0178	1	40936	40936		0.79363	0.10326	1		+		7308	8212	3558	3578	9084	9084					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797057986259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.49	1	97.774	97.274	98.274	0.28442								0	0	0	1.0178	1	41024	41024		0.79363	0.79363	1		+		7309	8212	3558	3578	9085	9085					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800720095634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.756	1	97.984	97.484	98.484	0.22776								0	0	0	1.0178	1	41141	41141		0.79363	0.19213	1		+		7310	8212	3558	3578	9086	9086					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803771853447	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.839	1	25.524	25.024	26.024	1.6845								0	0	0	1.0178	1	9954	9954		0.79363	0.79363	1		+		7311	8212	3558	3578	9087	9087					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1801940798759	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.936	1	25.62	25.12	26.12	1.6845								0	0	0	1.0178	1	9994	9994		0.79363	0.79363	1		+		7312	8212	3558	3578	9088	9088					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1801025271416	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.058	1	25.742	25.242	26.242	1.6845								0	0	0	1.0178	1	10046	10046		0.79363	0.10326	1		+		7313	8212	3558	3578	9089	9089					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1799499392509	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.442	1	35.266	34.766	35.766	1.8237								0	0	0	1.0178	1	14025	14025		0.79363	0.10326	1		+		7314	8212	3558	3578	9090	9090					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1802551150322	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.557	1	47.527	47.027	48.027	1.9703								0	0	0	1.0178	1	19086	19086		0.79363	0.79363	1		+		7315	8212	3558	3578	9091	9091					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1804992556572	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.65	1	47.62	47.12	48.12	1.9703								0	0	0	1.0178	1	19124	19124		0.79363	0.79363	1		+		7316	8212	3558	3578	9092	9092					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1802856326103	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.743	1	47.714	47.214	48.214	1.9703								0	0	0	1.0178	1	19162	19162		0.79363	0.79363	1		+		7317	8212	3558	3578	9093	9093					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.837	1	47.808	47.308	48.308	1.9703								0	0	0	1.0178	1	19201	19201		0.79363	0.79363	1		+		7318	8212	3558	3578	9094	9094					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1802856326103	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.054	1	48.024	47.524	48.524	1.9703								0	0	0	1.0178	1	19294	19294		0.79363	0.79363	1		+		7319	8212	3558	3578	9095	9095					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805908083916	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.105	1	59.073	58.573	59.573	1.9684								0	0	0	1.0178	1	23955	23955		0.79363	0.79363	1		+		7320	8212	3558	3578	9096	9096					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1802245974541	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.198	1	59.166	58.666	59.666	1.9684								0	0	0	1.0178	1	23994	23994		0.79363	0.79363	1		+		7321	8212	3558	3578	9097	9097					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805602908134	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.729	1	75.525	75.025	76.025	1.7962								0	0	0	1.0178	1	30926	30926		0.79363	0.79363	1		+		7322	8212	3558	3578	9098	9098					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1806823611259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.853	1	75.649	75.149	76.149	1.7962								0	0	0	1.0178	1	30979	30979		0.79363	0.79363	1		+		7323	8212	3558	3578	9099	9099					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1804077029228	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.973	1	75.769	75.269	76.269	1.7962								0	0	0	1.0178	1	31031	31031		0.79363	0.79363	1		+		7324	8212	3558	3578	9100	9100					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803771853447	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.571	1	81.288	80.788	81.788	1.7167								0	0	0	1.0178	1	33374	33374		0.79363	0.79363	1		+		7325	8212	3558	3578	9101	9101					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1801025271416	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.689	1	81.406	80.906	81.906	1.7167								0	0	0	1.0178	1	33424	33424		0.79363	0	1		+		7326	8212	3558	3578	9102	9102					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803466677666	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.813	1	81.53	81.03	82.03	1.7167								0	0	0	1.0178	1	33476	33476		0.79363	0	1		+		7327	8212	3558	3578	9103	9103					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.935	1	81.652	81.152	82.152	1.7167								0	0	0	1.0178	1	33526	33526		0.79363	0	1		+		7328	8212	3558	3578	9104	9104					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1800720095634	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.117	1	81.834	81.334	82.334	1.7167								0	0	0	1.0178	1	33603	33603		0.79363	0	1		+		7329	8212	3558	3578	9105	9105					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1796752810478	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.208	1	81.925	81.425	82.425	1.7167								0	0	0	1.0178	1	33643	33643		0.79363	0.79363	1		+		7330	8212	3558	3578	9106	9106					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1793395876884	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.329	1	82.046	81.546	82.546	1.7167								0	0	0	1.0178	1	33698	33698		0.79363	0.79363	1		+		7331	8212	3558	3578	9107	9107					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1797057986259	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.445	1	82.161	81.661	82.661	1.7167								0	0	0	1.0178	1	33748	33748		0.79363	0.79363	1		+		7332	8212	3558	3578	9108	9108					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1797973513603	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.565	1	82.278	81.778	82.778	1.7137								0	0	0	1.0178	1	33799	33799		0.79363	0.79363	1		+		7333	8212	3558	3578	9109	9109					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803466677666	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.659	1	82.355	81.855	82.855	1.6959								0	0	0	1.0178	1	33839	33839		0.79363	0.79363	1		+		7334	8212	3558	3578	9110	9110					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1804382205009	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.782	1	82.478	81.978	82.978	1.6959								0	0	0	1.0178	1	33891	33891		0.79363	0.79363	1		+		7335	8212	3558	3578	9111	9111					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1806213259697	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.03	1	82.725	82.225	83.225	1.6959								0	0	0	1.0178	1	33995	33995		0.79363	0.10326	1		+		7336	8212	3558	3578	9112	9112					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1794616580009	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.715	1	87.262	86.762	87.762	1.547								0	0	0	1.0178	1	36057	36057		0.79363	0.10326	1		+		7337	8212	3558	3578	9113	9113					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803161501884	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.16	1	101.35	100.85	101.85	0.19076								0	0	0	1.0178	1	42536	42536		0.79363	0.79363	1		+		7338	8212	3558	3578	9114	9114					-0.0658693079412842
GGPSCHFV	8	Unmodified	_GGPSCHFV_					0	0	0			REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	REV__chr1:17409194-17410007|96|47.83|0.06|9.75|-|2|RCC2,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1789123415947	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.11	1	102.3	101.8	102.8	0.19076								0	0	0	1.0178	1	42938	42938		0.79363	0.79363	1		+		7339	8212	3558	3578	9115	9115					-0.0658693079412842
GGQGGGDGGGG	11	Unmodified	_GGQGGGDGGGG_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1520568728447	2	388.151906	774.289259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.936	1	36.936	36.436	37.436	0								0	0	0	0.63775	1	15484	15484		0	0	1		+		7340	11574	3559	3579	9116	9116					-0.10691431692112019
GGQGGGDGGGG	11	Unmodified	_GGQGGGDGGGG_					0	0	0			REV__ENSG00000188573|ENST00000338333|FBLL1	REV__ENSG00000188573|ENST00000338333|FBLL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1523925662041	2	388.151906	774.289259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.076	1	79.376	78.876	79.876	0.30047								0	0	0	0.63775	1	33065	33065		0	0	1		+		7341	11574	3559	3579	9117	9117					-0.10691431692112019
GGRLLLST	8	Unmodified	_GGRLLLST_					0	0	0		INTS3|p.L98Tfs*3|1|0.05|ENSG00000143624|chr1:153741341-153741342|-/A|frameshift_variant;ENST00000481797.5_1_1:153701080-153719633:+|nuORF;ENSG00000143624|ENST00000318967|INTS3;nc|ENSG00000143624|Q68E01|INTS3	INTS3|p.L98Tfs*3|1|0.05|ENSG00000143624|chr1:153741341-153741342|-/A|frameshift_variant	INTS3|p.L98Tfs*3|1|0.05|ENSG00000143624|chr1:153741341-153741342|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	409.2980529665947	2	408.750527	815.486502	2.921	0.0011939	1.8873	0.00077145	4.8083	0.0019654	408.7505967310386	107.74	0.088913	107.79	107.73	107.82	0.052452					7	4	2	0	0	0	2.3239	1	46130	46130		2.3027	1.5091	1	7013500			7342	3044	3560	3580	9118	9118					0.07137819588615457
GGRVRTLP	8	Unmodified	_GGRVRTLP_					0	0	0		ENST00000252675.6_1_19:5866654-5867368:-|nuORF	ENST00000252675.6_1_19:5866654-5867368:-|nuORF	ENST00000252675.6_1_19:5866654-5867368:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2626525759697	2	428.261594	854.508634	1.042	0.00044623	0.3961	0.00016963	1.4381	0.00061587	428.26172948888245	73.476	0.98903	73.476	73.184	74.173	0					91	31	5	0	0	0	0.88663	1	30716	30716		4.756	0	1	296800000			7343	5586	3561	3581	9119	9119					0.07556044057048439
GGSAGRRAPRR	11	Unmodified	_GGSAGRRAPRR_					0	0	0			REV__ENST00000554224.5_1_14:100762018-100772718:-|nuORF	REV__ENST00000554224.5_1_14:100762018-100772718:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8855468630791	3	380.88675	1139.63842	0.27359	0.00010421	-2.1313	-0.00081177	-1.8577	-0.00070756	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.98969	1	21462	21462		4.4062	1.5629	1	18085000	+		7344	13850	3562	3582	9120	9120					0.07418613388881568
GGSLLVGP	8	Unmodified	_GGSLLVGP_					0	0	0			REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2078124880791	2	350.205421	698.39629	0.8532	0.0002988	3.4825	0.0012196	4.3357	0.0015184	350.2064603781969	31.782	1.0442	32.072	31.449	32.494	0.29086					56	33	2	0	0	0	0.89008	1	13249	13249		2.5775	0	1	1695400	+		7345	14594	3563	3583	9121	9121					0.035027702601951205
GGVPLIIN	8	Unmodified	_GGVPLIIN_					0	0	0		ENST00000579096.1_1_17:73110716-73125130:+|nuORF;ENSG00000125449|ENST00000245543|ARMC7	ENST00000579096.1_1_17:73110716-73125130:+|nuORF	ENST00000579096.1_1_17:73110716-73125130:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.7411376833916	2	391.742171	781.469789	0.21709	8.5043E-05	-2.9576	-0.0011586	-2.7405	-0.0010736	391.7407031817206	63.817	1.2871	63.817	63.24	64.527	0					54	40	2	0	0	0	0.89008	1	26566	26566		2.5775	0	1	4876600			7346	2261	3564	3584	9122	9122					0.07031318702661338
GGVSIAVP	8	Unmodified	_GGVSIAVP_					0	0	0		ENST00000590787.1_1_19:10922561-10934848:+|nuORF;ENST00000590806.5_1_19:10922561-10941720:+|nuORF	ENST00000590787.1_1_19:10922561-10934848:+|nuORF	ENST00000590787.1_1_19:10922561-10934848:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.2053100466728	2	350.205421	698.39629	0.36994	0.00012956	1.316	0.00046088	1.686	0.00059044	350.20545594093073	30.022	0.58441	31.837	31.615	32.199	1.8151					27	18	2	0	0	0	0.89051	1	12545	12545		2.3027	0	1	2434200			7347	7483	3565	3585	9123	9123					0.035027702601951205
GGWAGGNA	8	Unmodified	_GGWAGGNA_					0	0	0		QDPR|p.V157Ffs*33|1|0.08|ENSG00000151552|chr4:17492308-17492308|C/-|frameshift_variant;nc|ENSG00000151552|P09417-2|QDPR;ENSG00000151552|ENST00000281243|QDPR	QDPR|p.V157Ffs*33|1|0.08|ENSG00000151552|chr4:17492308-17492308|C/-|frameshift_variant	QDPR|p.V157Ffs*33|1|0.08|ENSG00000151552|chr4:17492308-17492308|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.1513854861259	2	345.15372	688.292888	-1.6311	-0.00056296	-2.6905	-0.00092865	-4.3216	-0.0014916	345.15313135684147	34.798	0.65491	34.798	34.308	34.963	0					31	20	2	0	0	0	0.89198	1	14603	14603		0	0	1	804570			7348	3293	3566	3586	9124	9124					-0.06372717127635497
GGWLAAVLVL	10	Unmodified	_GGWLAAVLVL_					0	0	0			REV__TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	REV__TMEM234|p.L53Yfs*10|1|0.19|ENSG00000160055|chr1:32221882-32221883|-/CACCACATACACATAAAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8093444705009	2	499.805303	997.596052	3.0933	0.001546	2.7409	0.0013699	5.8342	0.002916	499.80690867369685	60.509	0.4043	61.928	61.748	62.153	1.4196					36	12	4	0	0	0	0.28071	1	25346	25346		40.449	2.2974	1	4584800	+		7349	10586	3567	3587	9125	9125					0.09715825207922535
GGWQWREREV	10	Unmodified	_GGWQWREREV_					0	0	0		ENST00000256649.8_1_1:117664141-117664195:-|nuORF	ENST00000256649.8_1_1:117664141-117664195:-|nuORF	ENST00000256649.8_1_1:117664141-117664195:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8829223513603	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1502	1	3.8986	3.3986	4.3986	0.7484								0	0	0	0.66254	1	1307	1307		0.15932	0	1				7350	5599	3568	3588	9126	9126					-0.012230481449932995
GGYGGGYA	8	Unmodified	_GGYGGGYA_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.1487914919853	2	351.148104	700.281654	2.9338	0.0010302	-0.64902	-0.0002279	2.2848	0.0008023	351.147991681512	93.852	0.69649	94.724	94.353	95.05	0.87176					66	21	4	0	0	0	0.89198	4	39429	39429;39466;39505;39545		0	0	1	9130700	+	+	7351	11021	3569	3589	9127;9128;9129;9130	9127					-0.080475392217636
GGYGGGYA	8	Unmodified	_GGYGGGYA_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	351.2381469607353	2	351.148104	700.281654	2.9338	0.0010302	-0.64902	-0.0002279	2.2848	0.0008023	351.147991681512	93.852	0.69649	94.724	94.353	95.05	0.87176					66	21	4	0	0	0	2.3239	1	39617	39617		0	0	1	9130700	+	+	7352	11021	3569	3589	9131	9131					-0.080475392217636
GGYGGGYA	8	Unmodified	_GGYGGGYA_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.1486389040947	2	351.148104	700.281654	2.8245	0.00099183	-1.3268	-0.00046592	1.4977	0.00052592	351.147803730195	93.442	0.71812	94.719	94.388	95.106	1.277					67	22	4	0	0	0	0.89198	3	39284	39284;39334;39389		0	0	1	10838000	+	+	7353	11021	3569	3589	9132;9133;9134	9132					-0.080475392217636
GGYGGGYA	8	Unmodified	_GGYGGGYA_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2383605837822	2	351.148104	700.281654	2.8245	0.00099183	-1.3268	-0.00046592	1.4977	0.00052592	351.147803730195	93.442	0.71812	94.719	94.388	95.106	1.277					67	22	4	0	0	0	2.3239	1	39196	39196		0	0	1	10838000	+	+	7354	11021	3569	3589	9135	9135					-0.080475392217636
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1339294314384	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.826	1	65.826	65.326	66.326	0								0	0	0	0.42693	1	27427	27427		0.26902	0.1097	1				7355	1211	3570	3590	9136	9136					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1335632205009	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.93	1	102.99	102.49	103.49	0.062805								0	0	0	0.42693	1	43130	43130		0.26902	0.26902	1				7356	1211	3570	3590	9137	9137					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1361572146416	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.85	1	112.89	112.39	113.39	0.044189								0	0	0	0.42693	1	48622	48622		0.26902	0.26902	1				7357	1211	3570	3590	9138	9138					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1352722048759	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.95	1	112.99	112.49	113.49	0.044189								0	0	0	0.42693	1	48660	48660		0.26902	0.26902	1				7358	1211	3570	3590	9139	9139					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349365115166	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.04	1	113.09	112.59	113.59	0.044189								0	0	0	0.42693	1	48699	48699		0.26902	0.1097	1				7359	1211	3570	3590	9140	9140					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349975466728	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.13	1	113.18	112.68	113.68	0.044189								0	0	0	0.42693	1	48737	48737		0.26902	0.26902	1				7360	1211	3570	3590	9141	9141					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349059939384	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.23	1	113.28	112.78	113.78	0.044189								0	0	0	0.42693	1	48777	48777		0.26902	0.1097	1				7361	1211	3570	3590	9142	9142					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346313357353	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.33	1	113.37	112.87	113.87	0.044189								0	0	0	0.42693	1	48816	48816		0.26902	0.26902	1				7362	1211	3570	3590	9143	9143					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346923708916	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.43	1	113.48	112.98	113.98	0.044189								0	0	0	0.42693	1	48857	48857		0.26902	0.26902	1				7363	1211	3570	3590	9144	9144					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1348144412041	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.56	1	113.6	113.1	114.1	0.044189								0	0	0	0.42693	1	48909	48909		0.26902	0.1097	1				7364	1211	3570	3590	9145	9145					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1351196169853	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.7	113.2	114.2	0.044189								0	0	0	0.42693	1	48949	48949		0.26902	0.26902	1				7365	1211	3570	3590	9146	9146					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347534060478	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.76	1	113.8	113.3	114.3	0.044189								0	0	0	0.42693	1	48988	48988		0.26902	0.26902	1				7366	1211	3570	3590	9147	9147					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346313357353	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.88	1	113.93	113.43	114.43	0.044189								0	0	0	0.42693	1	49039	49039		0.26902	0.1097	1				7367	1211	3570	3590	9148	9148					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1348754763603	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	114.02	113.52	114.52	0.042839								0	0	0	0.42693	1	49078	49078		0.26902	0.1097	1				7368	1211	3570	3590	9149	9149					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347228884697	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.08	1	114.12	113.62	114.62	0.042839								0	0	0	0.42693	1	49117	49117		0.26902	0.1097	1				7369	1211	3570	3590	9150	9150					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349975466728	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.18	1	114.22	113.72	114.72	0.042839								0	0	0	0.42693	1	49157	49157		0.26902	0.26902	1				7370	1211	3570	3590	9151	9151					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347534060478	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.3	1	114.34	113.84	114.84	0.042839								0	0	0	0.42693	1	49206	49206		0.26902	0.1097	1				7371	1211	3570	3590	9152	9152					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1348449587822	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.4	1	114.44	113.94	114.94	0.042839								0	0	0	0.42693	1	49247	49247		0.26902	0.1097	1				7372	1211	3570	3590	9153	9153					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349365115166	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.49	1	114.54	114.04	115.04	0.042839								0	0	0	0.42693	1	49285	49285		0.26902	0.1097	1				7373	1211	3570	3590	9154	9154					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345397830009	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.59	1	114.63	114.13	115.13	0.042839								0	0	0	0.42693	1	49323	49323		0.26902	0.1097	1				7374	1211	3570	3590	9155	9155					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1348449587822	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.69	1	114.73	114.23	115.23	0.042839								0	0	0	0.42693	1	49362	49362		0.26902	0.26902	1				7375	1211	3570	3590	9156	9156					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344787478447	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.78	1	114.83	114.33	115.33	0.042839								0	0	0	0.42693	1	49401	49401		0.26902	0.1097	1				7376	1211	3570	3590	9157	9157					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346008181572	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.98	1	115.02	114.52	115.52	0.042839								0	0	0	0.42693	1	49479	49479		0.26902	0.1097	1				7377	1211	3570	3590	9158	9158					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346008181572	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.17	1	115.22	114.72	115.72	0.041786								0	0	0	0.42693	1	49557	49557		0.26902	0.26902	1				7378	1211	3570	3590	9159	9159					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345092654228	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.27	1	115.31	114.81	115.81	0.041786								0	0	0	0.42693	1	49596	49596		0.26902	0.26902	1				7379	1211	3570	3590	9160	9160					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1349975466728	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.47	1	115.51	115.01	116.01	0.041786								0	0	0	0.42693	1	49674	49674		0.26902	0.1097	1				7380	1211	3570	3590	9161	9161					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346313357353	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.57	1	115.61	115.11	116.11	0.041786								0	0	0	0.42693	1	49714	49714		0.26902	0.1097	1				7381	1211	3570	3590	9162	9162					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346313357353	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.76	1	115.8	115.3	116.3	0.041786								0	0	0	0.42693	1	49793	49793		0.26902	0.26902	1				7382	1211	3570	3590	9163	9163					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343566775322	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.86	1	115.9	115.4	116.4	0.041786								0	0	0	0.42693	1	49831	49831		0.26902	0.1097	1				7383	1211	3570	3590	9164	9164					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345703005791	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.96	1	116	115.5	116.5	0.041786								0	0	0	0.42693	1	49871	49871		0.26902	0.26902	1				7384	1211	3570	3590	9165	9165					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344177126884	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.06	1	116.1	115.6	116.6	0.041786								0	0	0	0.42693	1	49911	49911		0.26902	0.26902	1				7385	1211	3570	3590	9166	9166					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345703005791	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.38	1	116.42	115.92	116.92	0.041519								0	0	0	0.42693	1	50040	50040		0.26902	0.1097	1				7386	1211	3570	3590	9167	9167					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344787478447	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.67	1	116.71	116.21	117.21	0.041039								0	0	0	0.42693	1	50156	50156		0.26902	0.26902	1				7387	1211	3570	3590	9168	9168					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343566775322	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.77	1	116.81	116.31	117.31	0.041039								0	0	0	0.42693	1	50197	50197		0.26902	0.26902	1				7388	1211	3570	3590	9169	9169					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343566775322	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.12	1	117.16	116.66	117.66	0.041039								0	0	0	0.42693	1	50339	50339		0.26902	0.26902	1				7389	1211	3570	3590	9170	9170					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345703005791	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.22	1	117.26	116.76	117.76	0.041039								0	0	0	0.42693	1	50377	50377		0.26902	0.1097	1				7390	1211	3570	3590	9171	9171					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345092654228	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.32	1	117.36	116.86	117.86	0.041039								0	0	0	0.42693	1	50419	50419		0.26902	0.26902	1				7391	1211	3570	3590	9172	9172					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346618533134	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.7	1	117.74	117.24	118.24	0.041039								0	0	0	0.42693	1	50573	50573		0.26902	0.1097	1				7392	1211	3570	3590	9173	9173					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345703005791	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.8	1	117.84	117.34	118.34	0.041039								0	0	0	0.42693	1	50613	50613		0.26902	0.26902	1				7393	1211	3570	3590	9174	9174					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345092654228	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.92	1	117.97	117.47	118.47	0.041039								0	0	0	0.42693	1	50665	50665		0.26902	0.26902	1				7394	1211	3570	3590	9175	9175					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346618533134	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.06	1	118.1	117.6	118.6	0.041039								0	0	0	0.42693	1	50719	50719		0.26902	0.1097	1				7395	1211	3570	3590	9176	9176					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1342040896416	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.18	1	118.22	117.72	118.72	0.041039								0	0	0	0.42693	1	50771	50771		0.26902	0.26902	1				7396	1211	3570	3590	9177	9177					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344177126884	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.48	1	119.52	119.02	120.02	0.041039								0	0	0	0.42693	1	51301	51301		0.26902	0.1097	1				7397	1211	3570	3590	9178	9178					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1339599490166	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.88	1	103.04	102.54	103.54	0.16445								0	0	0	0.42693	1	43339	43339		0.26902	0.26902	1				7398	1211	3570	3590	9179	9179					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1338989138603	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.34	1	111.5	111	112	0.16445								0	0	0	0.42693	1	48322	48322		0.26902	0.26902	1				7399	1211	3570	3590	9180	9180					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1340820193291	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.43	1	57.398	56.898	57.898	1.9684								0	0	0	0.42693	1	23243	23243		0.26902	0.1097	1				7400	1211	3570	3590	9181	9181					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1354247927666	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.18	1	103.36	102.86	103.86	0.18066								0	0	0	0.42693	1	43423	43423		0.26902	0.26902	1				7401	1211	3570	3590	9182	9182					-0.08481712589866675
GGYGGSRDY	9	Unmodified	_GGYGGSRDY_					0	0	0		ENST00000591055.5_1_19:1271297-1272439:+|nuORF;ENST00000593128.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011|CIRBP;ENST00000590347.5_1_19:1271297-1272439:+|nuORF;ENST00000590704.5_1_19:1271297-1272439:+|nuORF;nc|ENSG00000099622|Q14011-3|CIRBP;nc|ENSG00000099622|Q14011-2|CIRBP;ENSG00000099622|ENST00000587896|CIRBP	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	ENST00000591055.5_1_19:1271297-1272439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1337158083916	3	311.134996	930.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.29	109.79	110.79	0.15228								0	0	0	0.42693	1	47774	47774		0.26902	0.1097	1				7402	1211	3570	3590	9183	9183					-0.08481712589866675
GGYMPVDG	8	Unmodified	_GGYMPVDG_					0	0	0		tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	795.3359863162041	1	795.334166	794.32689	1.2894	0.0010255	1.4843	0.0011805	2.7737	0.002206	795.3349846576531	103.55	0.09433	103.55	103.5	103.6	0					14	4	4	0	0	0	0.89176	1	43499	43499		0.79363	0	1	55907000			7403	16651	3571	3591	9184	9184					-0.07850056750874046
GGYMPVDG	8	Unmodified	_GGYMPVDG_					0	0	0		tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	tr|A0A553STH4|A0A553STH4_NIACIMembranetransportproteinOS=NialliacirculansOX=1397GN=CEQ21_05050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	795.3362304568291	1	795.334166	794.32689	2.7521	0.0021889	0.3899	0.0003101	3.142	0.002499	795.3342578014838	103.53	0.080559	103.59	103.54	103.62	0.059502					9	3	3	0	0	0	0.89176	1	43451	43451		0.79363	0	1	41378000			7404	16651	3571	3591	9185	9185					-0.07850056750874046
GHCCDCYC	8	Unmodified	_GHCCDCYC_					0	0	0		ENST00000471987.1_1_1:207958419-207959036:+|nuORF;ENST00000367041.5_1_1:207958419-207963612:+|nuORF;ENST00000480003.5_1_1:207958419-207966884:+|nuORF	ENST00000471987.1_1_1:207958419-207959036:+|nuORF	ENST00000471987.1_1_1:207958419-207959036:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	904.0298339724541	1	903.225226	902.21795	1.5042	0.0013586	-3.7485	-0.0033858	-2.2443	-0.0020272	903.2221372431404	83.955	2.0709	85.143	84.547	86.618	1.1879					89	68	2	0	0	0	2.3239	1	35869	35869		0	0	1	54735000			7405	6056	3572	3592	9186	9186					-0.2370705030868976
GHCCDCYC	8	Unmodified	_GHCCDCYC_					0	0	0		ENST00000471987.1_1_1:207958419-207959036:+|nuORF;ENST00000367041.5_1_1:207958419-207963612:+|nuORF;ENST00000480003.5_1_1:207958419-207966884:+|nuORF	ENST00000471987.1_1_1:207958419-207959036:+|nuORF	ENST00000471987.1_1_1:207958419-207959036:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	903.225226	902.21795	1.5118	0.0013655	-5.394	-0.004872	-3.8822	-0.0035065	903.2213188516864	83.556	0.65173	85.194	84.823	85.475	1.6379	0.025526	-0.00086607	NaN	0	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27546000			7406	6056	3572	3592							-0.2370705030868976
GHCLKGLH	8	Unmodified	_GHCLKGLH_					0	0	0			REV__ENSG00000119698|ENST00000304338|PPP4R4	REV__ENSG00000119698|ENST00000304338|PPP4R4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	433.2671996951103	2	432.729072	863.443591	2.1029	0.00090998	2.4073	0.0010417	4.5102	0.0019517	432.72977635296894	44.582	1.268	46.541	45.878	47.146	1.9596					66	39	2	0	0	0	2.3239	1	18466	18466		2.5775	1.976	1	2579300	+		7407	9551	3573	3593	9187	9187					0.006407262595416796
GHDSCGCP	8	Unmodified	_GHDSCGCP_					0	0	0			REV__ENSG00000136011|ENST00000388887|STAB2	REV__ENSG00000136011|ENST00000388887|STAB2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1271240115166	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8977	1	9.9756	9.4756	10.476	0.077971								0	0	0	1.0178	1	4102	4102		0.69038	0.69038	1		+		7408	9968	3574	3594	9188	9188					-0.15364330839281592
GHFHFFCG	8	Unmodified	_GHFHFFCG_					0	0	0		LTR7_dup579|chr3:187466299-187466711:-|1.8444027474498268|0.0504993796162977|5.19|418.0|30|3|anti-sense	LTR7_dup579|chr3:187466299-187466711:-|1.8444027474498268|0.0504993796162977|5.19|418.0|30|3|anti-sense	LTR7_dup579|chr3:187466299-187466711:-|1.8444027474498268|0.0504993796162977|5.19|418.0|30|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	476.1977111697197	2	476.200148	950.385742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.86	1	110.91	110.41	111.41	0.047043								0	0	0	1.0178	1	47815	47815		0	0	1				7409	7787	3575	3595	9189	9189					-0.09143535665884883
GHGGAGGY	8	Unmodified	_GHGGAGGY_					0	0	0			REV__CON__Q9D312	REV__CON__Q9D312	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	674.4523193240166	1	675.284514	674.277237	2.681	0.0018104	-3.2883	-0.0022205	-0.60732	-0.00041011	675.2825912805561	103.9	0.094635	103.96	103.92	104.01	0.059502					7	4	2	0	0	0	2.3239	1	43714	43714		0	0	1	13292000	+	+	7410	8399	3576	3596	9190	9190					-0.07293003644667806
GHGGAGGY	8	Unmodified	_GHGGAGGY_					0	0	0			REV__CON__Q9D312	REV__CON__Q9D312	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	675.284514	674.277237	1.4635	0.00098828	-2.3835	-0.0016095	-0.91998	-0.00062125	675.2830511291062	103.94	0.095139	103.94	103.88	103.97	0	-0.034228	0.00028109	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11395000	+	+	7411	8399	3576	3596							-0.07293003644667806
GHGGAGGY	8	Unmodified	_GHGGAGGY_					0	0	0			REV__CON__Q9D312	REV__CON__Q9D312	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	675.284514	674.277237	2.8942	0.0019544	-4.7117	-0.0031817	-1.8175	-0.0012274	675.2814357267599	103.86	0.076233	104.03	103.97	104.05	0.16055	0.047647	-0.0012911	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8761600	+	+	7412	8399	3576	3596							-0.07293003644667806
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	686.3056518435478	1	686.303869	685.296593	1.3362	0.00091707	2.1201	0.0014551	3.4564	0.0023721	686.3042922521214	43.212	0.33216	44.565	44.344	44.677	1.3536					21	10	3	0	0	0	0.89176	2	18069	18069;18117		0.79363	0.10326	1	1867300	+		7413	12140	3577	3597	9191;9192	9191					-0.05864370625420179
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	686.3078491091728	1	686.303869	685.296593	1.8788	0.0012894	3.2642	0.0022402	5.143	0.0035297	686.3061089198555	44.056	0.40191	45.41	45.163	45.565	1.3536					24	12	3	0	0	0	0.89008	1	18471	18471		2.5775	1.8871	1	2195400	+		7414	12140	3577	3597	9193	9193					-0.05864370625420179
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	686.303869	685.296593	1.8788	0.0012894	3.2642	0.0022402	5.143	0.0035297	686.3061089198555	44.056	0.40191	45.41	45.163	45.565	1.3536	-0.071039	2.4772E-05	NaN	2.5775	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2195400	+		7415	12140	3577	3597							-0.05864370625420179
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	686.303869	685.296593	1.3362	0.00091707	2.1201	0.0014551	3.4564	0.0023721	686.3042922521214	43.212	0.33216	44.565	44.344	44.677	1.3536	-0.045237	-0.00076162	NaN	0.79363	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1867300	+		7416	12140	3577	3597							-0.05864370625420179
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	686.303869	685.296593	1.5515	0.0010648	3.1902	0.0021894	4.7417	0.0032542	686.3060293754717	43.608	0.33272	45.552	45.368	45.701	1.9438	0.071039	-2.605E-05	NaN	2.5775	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2350900	+		7417	12140	3577	3597							-0.05864370625420179
GHGKGGAC	8	Unmodified	_GHGKGGAC_					0	0	0			REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	REV__ENST00000507307.5_1_5:179125985-179126592:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	686.303869	685.296593	1.2914	0.00088632	3.6454	0.0025019	4.9369	0.0033882	686.3063954140995	42.735	0.36195	44.656	44.478	44.84	1.9211	0.045237	0.00028521	NaN	0.79363	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2130600	+		7418	12140	3577	3597							-0.05864370625420179
GHHWWQWH	8	Unmodified	_GHHWWQWH_					0	0	0			REV__ENST00000411694.1_1_21:45578646-45579129:-|nuORF	REV__ENST00000411694.1_1_21:45578646-45579129:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	392.2871276736259	3	391.84237	1172.50528	-0.97233	-0.000381	0.54339	0.00021292	-0.42894	-0.00016808	391.8439270023621	8.051	0.1807	8.6876	8.6079	8.7886	0.63651					15	12	2	0	0	0	2.3239	1	3331	3331		0.45834	0	1	104140	+		7419	12921	3578	3598	9194	9194					-0.07407205996969424
GHKKMLTS	8	Unmodified	_GHKKMLTS_					0	0	0			REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2510558962822	2	451.249837	900.485122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.054	1	57.054	56.554	57.554	0								0	0	0	1.0178	1	23806	23806		2.5775	0	1		+		7420	15853	3579	3599	9195	9195					0.0308986222820522
GHKPRWLA	8	Unmodified	_GHKPRWLA_					0	0	0		ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	ENSG00000173930|ENST00000310954|SLCO4C1	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1876098513603	3	322.187366	963.540269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.5	1	103.5	103	104	0								0	0	0	1.0178	1	43461	43461		0.40072	0.40072	1				7421	4309	3580	3600	9196	9196					0.05704036810971047
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	390.51141	1168.5124	-0.57672	-0.00022522	0.66114	0.00025818	0.084424	3.2968E-05	390.5134864600334	28.9	0.39907	28.9	28.779	29.178	0					19	12	2	0	0	0	0.11852	1	12083	12083		4.5289	0.93237	1	297420			7422	7988	3581	3601	9197	9197					-0.06511654231417197
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	390.51141	1168.5124	-0.73582	-0.00028735	0.99262	0.00038763	0.2568	0.00010028	390.5131856014732	25.408	0.67846	25.408	25.163	25.841	0					30	21	2	0	0	0	0.11837	1	10681	10681		4.897	0.36815	1	399850			7423	7988	3581	3601	9198	9198					-0.06511654231417197
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	390.51141	1168.5124	-0.63617	-0.00024843	-0.15521	-6.061E-05	-0.79138	-0.00030904	390.84456615261473	27.579	0.39274	27.579	27.441	27.833	0					18	12	2	0	0	0	0.11837	1	11501	11501		4.897	1.31	1	269510			7424	7988	3581	3601	9199	9199					-0.06511654231417197
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	390.51141	1168.5124	-0.70518	-0.00027538	0.81025	0.00031641	0.10507	4.1033E-05	390.8447660861238	26.226	0.9996	26.226	25.565	26.564	0					41	32	2	0	0	0	0.11837	1	10944	10944		2.4985	1.6341	1	280090			7425	7988	3581	3601	9200	9200					-0.06511654231417197
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845641970634	3	390.51141	1168.5124	0.86301	0.00033701	1.3519	0.00052792	2.2149	0.00086494	390.5126328658329	25.142	0.46309	25.394	25.057	25.52	0.25197					18	14	2	0	0	0	0.11837	1	10390	10390		2.4985	1.0166	1	197320			7426	7988	3581	3601	9201	9201					-0.06511654231417197
GHNAMYWYK	9	Unmodified	_GHNAMYWYK_					0	0	0		nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	nc|ENSG00000211745|A0A539|TRBV4-2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845641970634	3	390.51141	1168.5124	0.83361	0.00032553	3.4298	0.0013394	4.2634	0.0016649	390.5136667871446	24.586	0.60634	24.829	24.412	25.018	0.24251					25	19	2	0	0	0	0.11837	1	10287	10287		4.897	2.1618	1	441240			7427	7988	3581	3601	9202	9202					-0.06511654231417197
GHPNCQCA	8	Unmodified	_GHPNCQCA_					0	0	0			REV__nc|ENSG00000188157|O00468-2|AGRN	REV__nc|ENSG00000188157|O00468-2|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.1560241580009	2	415.157622	828.300692	0.56285	0.00023367	-1.9047	-0.00079075	-1.3419	-0.00055708	415.156771602949	67.647	0.28459	67.647	67.504	67.789	0					12	8	2	0	0	0	0.89178	1	28186	28186		0.69038	0	1	375250	+		7428	11561	3582	3602	9203	9203					-0.12032649194009082
GHQCQCAH	8	Unmodified	_GHQCQCAH_					0	0	0			REV__ENSG00000244486|ENST00000622235|SCARF2	REV__ENSG00000244486|ENST00000622235|SCARF2	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.1682311892509	2	442.168521	882.32249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.28818	1	0.28818	-0.21182	0.78818	0								0	0	0	1.0178	1	117	117		2.5775	0	1		+		7429	11939	3583	3603	9204	9204					-0.12337844445448809
GHQRQKTPEG	10	Unmodified	_GHQRQKTPEG_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2560302615166	2	569.291611	1136.56867	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.34	1	103.52	103.02	104.02	0.18066								0	0	0	0.66176	1	43500	43500		1.4819	0	1				7430	2341	3584	3604	9205	9205					0.005846899296102492
GHRRRRRRRRS	11	Unmodified	_GHRRRRRRRRS_					0	0	0			REV__ENST00000366641.3_1_1:231557623-231557677:-|nuORF	REV__ENST00000366641.3_1_1:231557623-231557677:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.9901306033134	4	387.990241	1547.93186	-0.44651	-0.00017324	1.9112	0.00074151	1.4647	0.00056827	388.24137773707247	36.408	0.7895	37.684	37.456	38.246	1.2762					126	43	5	0	0	0	1.0402	1	15258	15258		0.094841	0	1	17055000	+		7431	12610	3585	3605	9206	9206					0.17980825282256774
GHSHFGVP	8	Unmodified	_GHSHFGVP_					0	0	0			REV__ENST00000437289.1_1_10:2544043-2579735:+|nuORF	REV__ENST00000437289.1_1_10:2544043-2579735:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	419.2054015994072	2	419.203744	836.392936	2.0803	0.00087206	1.1853	0.00049687	3.2655	0.0013689	419.2045665716504	67.032	0.37221	67.354	67.157	67.529	0.32269					22	12	2	0	0	0	0.89176	1	28074	28074		0.79363	0	1	2339500	+		7432	13059	3586	3606	9207	9207					-0.03180479793809354
GHVFEWQV	8	Unmodified	_GHVFEWQV_					0	0	0			REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	500.7786437869072	2	501.245609	1000.47667	2.6796	0.0013431	-1.6992	-0.00085171	0.98038	0.00049141	501.7442279951283	69.889	0.47009	71.242	70.896	71.366	1.3536					20	14	2	0	0	0	2.3239	1	29191	29191		10.183	0	1	736650	+		7433	11531	3587	3607	9208	9208					-0.023553684167723077
GHVFEWQV	8	Unmodified	_GHVFEWQV_					0	0	0			REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	REV__nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	501.245609	1000.47667	1.6669	0.00083551	-3.2238	-0.0016159	-1.557	-0.00078042	501.24466388273277	69.344	0.31466	71.197	71.041	71.356	1.853	-0.022645	-0.00029334	NaN	10.183	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	595730	+		7434	11531	3587	3607							-0.023553684167723077
GHVGTVYAL	9	Unmodified	_GHVGTVYAL_					0	0	0		ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7	ENSG00000131653|ENST00000326181|TRAF7	ENSG00000131653|ENST00000326181|TRAF7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1726867556572	2	458.747985	915.481417	2.0142	0.00092399	-0.58382	-0.00026783	1.4303	0.00065617	458.7484179237502	42.485	0.35055	43.825	43.602	43.953	1.3399					23	10	3	0	0	0	0.11645	1	17858	17858		4.756	0	1	2735700			7435	2499	3588	3608	9209	9209					0.020295157259852203
GHWLLTTWSL	10	Unmodified	_GHWLLTTWSL_					0	0	0		ENST00000491346.5_1_1:11796265-11806023:+|nuORF	ENST00000491346.5_1_1:11796265-11806023:+|nuORF	ENST00000491346.5_1_1:11796265-11806023:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	607.3231689333916	2	607.321848	1212.62914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.89	1	106.94	106.44	107.44	0.052452								0	0	0	0.66166	1	45627	45627		1.6526	0.17072	1				7436	6912	3589	3609	9210	9210					0.031334072599975116
GIADYTINKG	10	Unmodified	_GIADYTINKG_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1051.548754870892	1	1051.54185	1050.53457	2.7209	0.0028612	3.6491	0.0038372	6.37	0.0066984	1051.545558682631	86.5	0.39273	86.5	86.277	86.67	0					28	12	3	0	0	0	0.41677	1	36098	36098		32.305	2.0807	1	4377500	+		7437	15323	3590	3610	9211	9211					0.011328487179980584
GIAGAGIVGL	10	Unmodified	_GIAGAGIVGL_					0	0	0			REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	827.5018188357353	1	827.498529	826.491253	1.7328	0.0014339	1.6469	0.0013628	3.3797	0.0027967	827.4999590001303	51.675	0.24981	52	51.85	52.1	0.32553					12	7	2	0	0	0	0.70643	1	21679	21679		18.135	0	1	513920	+		7438	15894	3591	3611	9212	9212					0.07106703731381003
GIAGAGIVGL	10	Unmodified	_GIAGAGIVGL_					0	0	0			REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	827.5009643435478	1	827.498529	826.491253	1.408	0.0011651	0.65268	0.00054009	2.0606	0.0017052	827.4992673947737	49.882	0.31155	51.859	51.665	51.977	1.9772					20	9	3	0	0	0	0.19438	1	20856	20856		49.669	0	1	2066000	+		7439	15894	3591	3611	9213	9213					0.07106703731381003
GIAGAGIVGL	10	Unmodified	_GIAGAGIVGL_					0	0	0			REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	827.498529	826.491253	1.7328	0.0014339	1.6469	0.0013628	3.3797	0.0027967	827.4999590001303	51.675	0.24981	52	51.85	52.1	0.32553	0.1181	0.00097503	NaN	49.669	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513920	+		7440	15894	3591	3611							0.07106703731381003
GIAGAGIVGL	10	Unmodified	_GIAGAGIVGL_					0	0	0			REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	REV__tr|A0A7D7A6S2|A0A7D7A6S2_9CLOTD-2-hydroxyaciddehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11285PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	827.498529	826.491253	1.408	0.0011651	0.65268	0.00054009	2.0606	0.0017052	827.4992673947737	49.882	0.31155	51.859	51.665	51.977	1.9772	-0.022971	0.00015231	NaN	49.669	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2066000	+		7441	15894	3591	3611							0.07106703731381003
GIALFTSGFL	10	Unmodified	_GIALFTSGFL_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35094156-35095562:-|nuORF;ENST00000474436.1_1_9:35093318-35095562:-|nuORF;nc|ENSG00000165282|Q8TEQ8-2|PIGO	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2897216677666	2	513.286943	1024.55933	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.557	1	61.557	61.057	62.057	0								0	0	0	0.64816	1	25666	25666		15.847	0	1				7442	3827	3592	3612	9214	9214					0.04803528591401118
GIASIIVLS	9	Unmodified	_GIASIIVLS_					0	0	0		tr|A0A7D7AB03|A0A7D7AB03_9CLOTLrgBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13380PE=4SV=1	tr|A0A7D7AB03|A0A7D7AB03_9CLOTLrgBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13380PE=4SV=1	tr|A0A7D7AB03|A0A7D7AB03_9CLOTLrgBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	872.5444824099541	1	872.545145	871.537869	1.7108	0.0014928	-0.75872	-0.00066202	0.95211	0.00083076	872.5444890167948	78.831	0.39501	78.831	78.629	79.024	0					29	12	3	0	0	0	0.051699	1	32769	32769		67.344	0	1	5079200			7443	17317	3593	3613	9215	9215					0.09696143562666748
GIATAFYGII	10	Unmodified	_GIATAFYGII_					0	0	0			REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2886840701103	2	513.286943	1024.55933	2.3949	0.0012293	0.58661	0.0003011	2.9815	0.0015304	513.2871967345674	61.126	0.65997	61.126	60.892	61.552	0					61	20	4	0	0	0	0.44465	1	25598	25598		30.637	2.4633	1	36811000	+		7444	15182	3594	3614	9216	9216					0.04803528591378381
GIATAFYGII	10	Unmodified	_GIATAFYGII_					0	0	0			REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2886840701103	2	513.286943	1024.55933	2.3511	0.0012068	0.86642	0.00044472	3.2175	0.0016515	513.2873462737851	60.481	0.7282	60.809	60.568	61.296	0.32809					60	22	4	0	0	0	0.047799	1	25383	25383		85.272	12.304	1	33109000	+		7445	15182	3594	3614	9217	9217					0.04803528591378381
GIATAFYGII	10	Unmodified	_GIATAFYGII_					0	0	0			REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2887451052666	2	513.286943	1024.55933	2.7666	0.0014201	0.3256	0.00016713	3.0922	0.0015872	513.2871281548722	59.279	0.79425	60.698	60.32	61.115	1.4196					71	22	4	0	0	0	0.076926	1	24895	24895		68.081	4.1202	1	72289000	+		7446	15182	3594	3614	9218	9218					0.04803528591378381
GIATAFYGII	10	Unmodified	_GIATAFYGII_					0	0	0			REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	REV__tr|A0A553SRY9|A0A553SRY9_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2888061404228	2	513.286943	1024.55933	2.617	0.0013433	-0.061299	-3.1464E-05	2.5557	0.0013118	513.2869124876555	58.813	0.70518	60.782	60.457	61.162	1.969					70	22	4	0	0	0	0.32206	1	24785	24785		37.974	5.1883	1	63329000	+		7447	15182	3594	3614	9219	9219					0.04803528591378381
GIDADHASGL	10	Unmodified	_GIDADHASGL_					0	0	0			REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4	REV__nc|ENSG00000253953|Q9UN71-2|PCDHGB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2284118533134	2	478.227613	954.440674	1.934	0.00092491	-2.749	-0.0013146	-0.81494	-0.00038973	478.2268292930632	67.207	0.36061	68.596	68.407	68.768	1.3888					29	11	3	0	0	0	0.84024	1	28228	28228		7.9102	1.187	1	3246700	+		7448	11961	3595	3615	9220	9220					-0.03836870384282065
GIDHFLAAL	9	Unmodified	_GIDHFLAAL_					0	0	0			REV__tr|A0A7D6ZUH8|A0A7D6ZUH8_9CLOTCCAtRNAnucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00175PE=3SV=1	REV__tr|A0A7D6ZUH8|A0A7D6ZUH8_9CLOTCCAtRNAnucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00175PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7660705447197	2	478.763635	955.512717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.464	1	63.877	63.377	64.377	1.4134								0	0	0	0.16797	1	26191	26191		28.487	3.0875	1		+		7449	15720	3596	3616	9221	9221					0.03318088760090632
GIDKRAPNRL	10	Unmodified	_GIDKRAPNRL_					0	0	0			REV__ENST00000464835.1_1_7:110731500-110737228:+|nuORF	REV__ENST00000464835.1_1_7:110731500-110737228:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3392211794853	2	570.335821	1138.65709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.426	1	70.749	70.249	71.249	0.32224								0	0	0	0.66087	1	29482	29482		2.9952	1.151	1		+		7450	12351	3597	3617	9222	9222					0.09330730240071716
GIDKYRVLYKK	11	Unmodified	_GIDKYRVLYKK_					0	0	0			REV__tr|A0A7D6VTN2|A0A7D6VTN2_9CLOTTranscriptionalregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08615PE=4SV=1	REV__tr|A0A7D6VTN2|A0A7D6VTN2_9CLOTTranscriptionalregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08615PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1450683474541	3	461.61	1381.80817	0.56381	0.00026026	-0.47132	-0.00021757	0.092495	4.2696E-05	461.61002001038565	50.706	0.18268	52.682	52.606	52.788	1.9753					7	5	2	0	0	0	0.14606	1	21243	21243		0.094841	0	1	502630	+		7451	15494	3598	3618	9223	9223					0.13253871828055708
GIEGIVLID	9	Unmodified	_GIEGIVLID_					0	0	0		tr|A0A553SH47|A0A553SH47_NIACIAdenosine5'-phosphosulfatereductaseOS=NialliacirculansOX=1397GN=cysHPE=3SV=1	tr|A0A553SH47|A0A553SH47_NIACIAdenosine5'-phosphosulfatereductaseOS=NialliacirculansOX=1397GN=cysHPE=3SV=1	tr|A0A553SH47|A0A553SH47_NIACIAdenosine5'-phosphosulfatereductaseOS=NialliacirculansOX=1397GN=cysHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.5355712771416	1	928.534975	927.527698	2.6963	0.0025036	-0.75931	-0.00070505	1.937	0.0017986	928.5339878844514	78.041	0.41881	79.322	79.108	79.527	1.2809					31	13	3	0	0	0	0.03795	1	32703	32703		77.984	7.2688	1	5334800			7452	16134	3599	3619	9224	9224					0.061035358374169846
GIEPLVYL	8	Unmodified	_GIEPLVYL_					0	0	0		ENSG00000039523|ENST00000042381|RIPOR1;nc|ENSG00000039523|Q6ZS17|RIPOR1;nc|ENSG00000039523|Q6ZS17-3|RIPOR1;nc|ENSG00000039523|Q6ZS17-4|RIPOR1	ENSG00000039523|ENST00000042381|RIPOR1	ENSG00000039523|ENST00000042381|RIPOR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	451.7638732790947	2	452.262936	902.51132	2.0718	0.00093698	3.4652	0.0015672	5.537	0.0025042	452.2645260780874	79.221	0.1245	80.956	80.846	80.97	1.735					6	3	2	0	0	0	2.3239	1	33208	33208		5.7604	0	1	611000			7453	658	3600	3620	9225	9225					0.056164546713375785
GIFFFFLSFFL	11	Unmodified	_GIFFFFLSFFL_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|228|1|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|228|1|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|228|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.3737670779228	2	692.870643	1383.72673	2.9314	0.0020311	-3.0498	-0.0021131	-0.11839	-8.2032E-05	692.8684274528998	81.345	0.52576	82.579	82.348	82.873	1.2332					45	16	3	0	0	0	0.81656	1	34097	34097		14.838	1.7958	1	10840000			7454	7748	3601	3621	9226	9226					0.05021796136111334
GIGFVGLGL	9	Unmodified	_GIGFVGLGL_					0	0	0			REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	416.7507812380791	2	416.749996	831.485439	1.2149	0.00050631	0.45162	0.00018821	1.6665	0.00069452	416.75005273463694	46.038	0.36689	48.008	47.789	48.156	1.9703					21	11	2	0	0	0	0.08022	2	19283	19237;19283		56.048	8.2929	1	2772300	+		7455	15247	3602	3622	9227;9228	9228					0.06295605219713707
GIGFVGLGL	9	Unmodified	_GIGFVGLGL_					0	0	0			REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	416.749996	831.485439	1.6083	0.00067025	-0.11479	-4.7841E-05	1.4935	0.00062241	416.7499532692917	46.503	0.36938	47.878	47.681	48.051	1.3751	-0.065143	-0.00022749	NaN	56.048	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3337500	+		7456	15247	3602	3622							0.06295605219713707
GIGFVGLGL	9	Unmodified	_GIGFVGLGL_					0	0	0			REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	REV__tr|A0A553STM7|A0A553STM7_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05430PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	416.749996	831.485439	1.2149	0.00050631	0.45162	0.00018821	1.6665	0.00069452	416.75005273463694	46.038	0.36689	48.008	47.789	48.156	1.9703	0.065143	0.00024462	NaN	56.048	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2772300	+		7457	15247	3602	3622							0.06295605219713707
GIGGALAGLV	10	Unmodified	_GIGGALAGLV_					0	0	0			REV__tr|A0A7D6ZE49|A0A7D6ZE49_9CLOTChromateeffluxtransporterOS=ClostridiumintestinaleOX=36845GN=chrAPE=3SV=1	REV__tr|A0A7D6ZE49|A0A7D6ZE49_9CLOTChromateeffluxtransporterOS=ClostridiumintestinaleOX=36845GN=chrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	827.5002929568291	1	827.498529	826.491253	1.408	0.0011651	0.65268	0.00054009	2.0606	0.0017052	827.4992673947737	49.882	0.31155	51.859	51.665	51.977	1.9772					20	9	3	0	0	0	0.19438	1	20902	20902		49.669	0	1	2066000	+		7458	15620	3603	3623	9229	9229					0.07106703731392372
GIGIIALIFSF	11	Unmodified	_GIGIIALIFSF_					0	0	0		tr|A0A7D6VTT2|A0A7D6VTT2_9CLOTPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=ClostridiumintestinaleOX=36845GN=hppAPE=3SV=1	tr|A0A7D6VTT2|A0A7D6VTT2_9CLOTPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=ClostridiumintestinaleOX=36845GN=hppAPE=3SV=1	tr|A0A7D6VTT2|A0A7D6VTT2_9CLOTPutativeK(+)-stimulatedpyrophosphate-energizedsodiumpumpOS=ClostridiumintestinaleOX=36845GN=hppAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8483154177666	2	575.847167	1149.67978	1.5669	0.00090227	-2.0907	-0.0012039	-0.52384	-0.00030165	575.8459819690881	40.275	0.4487	40.275	40.041	40.49	0					31	13	3	0	0	0	0.95124	1	16939	16939		6.7232	0.51738	1	1070000			7459	16927	3604	3624	9230	9230					0.11092936585009738
GIHLFPSLV	9	Unmodified	_GIHLFPSLV_					0	0	0			REV__ENSG00000134255|ENST00000357172|CEPT1	REV__ENSG00000134255|ENST00000357172|CEPT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7906066775322	2	491.789653	981.564752	1.4803	0.000728	2.1392	0.001052	3.6195	0.00178	491.79060555910627	72.295	0.28513	72.295	72.142	72.427	0					13	8	2	0	0	0	0.13437	1	30118	30118		40.449	0	1	933430	+		7460	9899	3605	3625	9231	9231					0.07323252173841865
GIHLFPSLV	9	Unmodified	_GIHLFPSLV_					0	0	0			REV__ENSG00000134255|ENST00000357172|CEPT1	REV__ENSG00000134255|ENST00000357172|CEPT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7918884158134	2	491.789653	981.564752	2.3764	0.0011687	0.41156	0.0002024	2.788	0.0013711	491.7897408615895	71.636	0.41193	71.959	71.751	72.163	0.32359					20	12	2	0	0	0	0.18999	1	29950	29950		34.187	0	1	1065700	+		7461	9899	3605	3625	9232	9232					0.07323252173841865
GIHLFPSLV	9	Unmodified	_GIHLFPSLV_					0	0	0			REV__ENSG00000134255|ENST00000357172|CEPT1	REV__ENSG00000134255|ENST00000357172|CEPT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	492.3351318240166	2	491.789653	981.564752	2.3764	0.0011687	0.41156	0.0002024	2.788	0.0013711	491.7897408615895	71.636	0.41193	71.959	71.751	72.163	0.32359					20	12	2	0	0	0	0.039547	1	29962	29962		32.117	1.8922	1	1065700	+		7462	9899	3605	3625	9233	9233					0.07323252173841865
GIHQLTIVV	9	Unmodified	_GIHQLTIVV_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MSMS	GG20161007_CRH_Patient100_A02_01	1	490.3008605837822	2	490.300384	978.586216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.084	1	51.084	50.584	51.584	0								0	0	0	0.27791	1	21306	21306		20.454	1.1966	1		+		7463	10526	3606	3626	9234	9234					0.09606637202557522
GIILIFLRVKF	11	Unmodified	_GIILIFLRVKF_					0	0	0		nc|ENSG00000102078|O95258-2|SLC25A14;ENSG00000102078|ENST00000545805|SLC25A14;nc|ENSG00000102078|O95258-3|SLC25A14;ENST00000467496.5_1_X:129474252-129484631:+|nuORF	nc|ENSG00000102078|O95258-2|SLC25A14	nc|ENSG00000102078|O95258-2|SLC25A14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	439.7785217165947	3	440.291831	1317.85366	2.5547	0.0011248	0.58195	0.00025623	3.1366	0.001381	440.29221464336075	45.278	0.16222	46.643	46.53	46.692	1.3653					5	4	2	0	0	0	0.14606	1	18931	18931		1.2148	1.092	1	239500			7464	1379	3607	3627	9235	9235					0.20745142081091217
GIKIIQWLLGL	11	Unmodified	_GIKIIQWLLGL_					0	0	0			REV__nc|ENSG00000102024|P13797-3|PLS3	REV__nc|ENSG00000102024|P13797-3|PLS3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3161193728447	3	418.604186	1252.79073	1.9794	0.00082859	0.79091	0.00033108	2.7703	0.0011597	418.6044830203745	50.749	0.46689	51.077	50.856	51.323	0.32824					18	14	2	0	0	0	0.14606	1	21298	21298		0.50596	0.41111	1	466250	+		7465	9057	3608	3628	9236	9236					0.1744457629306453
GIKRGKTEKV	10	Unmodified	_GIKRGKTEKV_					0	0	0			REV__SPEN|p.S920Wfs*24|1|0.06|ENSG00000065526|chr1:15928998-15928999|-/GGTCTCAAATTCCTGAC|frameshift_variant	REV__SPEN|p.S920Wfs*24|1|0.06|ENSG00000065526|chr1:15928998-15928999|-/GGTCTCAAATTCCTGAC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3493530154228	2	558.348397	1114.68224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.437	1	39.749	39.249	40.249	0.31263								0	0	0	0.66031	1	16586	16586		3.9444	0	1		+		7466	8675	3609	3629	9237	9237					0.12948785042658528
GIKWACEYC	9	Unmodified	_GIKWACEYC_					0	0	0		ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant;ZRANB1|p.R366Ifs*18|1|0.03|ENSG00000019995|chr10:124972058-124972059|-/TTTTTTTGGCAGAGTCTCTCTCT|frameshift_variant;ENSG00000019995|ENST00000359653|ZRANB1	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	358.1561157107353	3	358.157867	1071.45177	-0.98044	-0.00035115	-1.417	-0.00050752	-2.3975	-0.00085867	358.15722032915073	79.426	0.36963	79.426	79.206	79.576	0					32	11	3	0	0	0	0.81521	1	33097	33097		2.7352	1.5419	1	1985900			7467	17372	3610	3630	9238	9238					-0.08109507606013722
GIKWACEYC	9	Unmodified	_GIKWACEYC_					0	0	0		ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant;ZRANB1|p.R366Ifs*18|1|0.03|ENSG00000019995|chr10:124972058-124972059|-/TTTTTTTGGCAGAGTCTCTCTCT|frameshift_variant;ENSG00000019995|ENST00000359653|ZRANB1	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	358.157867	1071.45177	1.4159	0.00050711	-3.5668	-0.0012775	-2.1509	-0.00077035	358.49058688669237	78.994	0.36446	79.303	79.078	79.443	0.30933	-0.068116	-0.00049099	NaN	2.7352	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1525600			7468	17372	3610	3630							-0.08109507606013722
GIKWACEYC	9	Unmodified	_GIKWACEYC_					0	0	0		ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant;ZRANB1|p.R366Ifs*18|1|0.03|ENSG00000019995|chr10:124972058-124972059|-/TTTTTTTGGCAGAGTCTCTCTCT|frameshift_variant;ENSG00000019995|ENST00000359653|ZRANB1	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	358.157867	1071.45177	1.3098	0.0004691	-3.3039	-0.0011833	-1.9941	-0.00071421	358.4911596885108	78.11	0.47916	79.391	79.137	79.616	1.2809	0.019313	-0.00020852	NaN	2.7352	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3415900			7469	17372	3610	3630							-0.08109507606013722
GIKWACEYC	9	Unmodified	_GIKWACEYC_					0	0	0		ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant;ZRANB1|p.R366Ifs*18|1|0.03|ENSG00000019995|chr10:124972058-124972059|-/TTTTTTTGGCAGAGTCTCTCTCT|frameshift_variant;ENSG00000019995|ENST00000359653|ZRANB1	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	358.157867	1071.45177	0.93773	0.00033586	-4.5085	-0.0016148	-3.5708	-0.0012789	358.49072914150497	77.614	0.39077	79.366	79.231	79.622	1.7514	-0.0057478	-0.0015029	NaN	2.7352	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2861400			7470	17372	3610	3630							-0.08109507606013722
GILGIQPPSV	10	Unmodified	_GILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.7954284548759	2	490.792392	979.570232	1.4035	0.00068882	0.1469	7.2098E-05	1.5504	0.00076091	490.79267560610697	69.398	0.62761	69.398	69.047	69.675	0					32	19	2	0	0	0	0.28892	3	28923	28863;28923;28978		39.957	18.211	1	594120			7471	5212	3611	3631	9239;9240;9241	9240					0.07962930965663872
GILGIQPPSV	10	Unmodified	_GILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.7946349978447	2	490.792392	979.570232	2.1553	0.0010578	-0.28829	-0.00014149	1.867	0.00091631	490.7923533610156	69.006	0.56418	69.328	68.967	69.532	0.32224					28	17	2	0	0	0	0.20516	2	28894	28818;28894		48.346	25.197	1	730310			7472	5212	3611	3631	9242;9243	9243					0.07962930965663872
GILGIQPPSV	10	Unmodified	_GILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.7938720583916	2	490.792392	979.570232	2.024	0.00099334	0.85375	0.00041901	2.8777	0.0014124	490.7928527242531	67.878	0.73391	69.256	68.789	69.523	1.3778					54	23	3	0	0	0	0.11481	2	28506	28452;28506		61.357	25.313	1	2259100			7473	5212	3611	3631	9244;9245	9245					0.07962930965663872
GILGIQPPSV	10	Unmodified	_GILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.7932006716728	2	490.792392	979.570232	1.4156	0.00069478	1.268	0.0006223	2.6836	0.0013171	490.79309766457527	67.365	0.70935	69.235	68.809	69.519	1.87					41	22	2	0	0	0	0.20516	2	28241	28241;28295		48.346	19.859	1	1407300			7474	5212	3611	3631	9246;9247	9246					0.07962930965663872
GILPMVPEV	9	Unmodified	_GILPMVPEV_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	TOP2A-STAU1|2|fusion	TOP2A-STAU1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.5291625857353	1	954.532866	953.52559	1.8583	0.0017738	-3.2664	-0.0031179	-1.4081	-0.001344	954.5306498128168	80.141	0.25082	81.392	81.232	81.483	1.2512					11	7	2	0	0	0	0.15478	1	33628	33628		38.151	16.405	1	736980			7475	16031	3612	3632	9248	9248					0.04696783827978379
GILRWHKE	8	Unmodified	_GILRWHKE_					0	0	0			REV__ENSG00000180574|ENST00000538173|EIF2S3B	REV__ENSG00000180574|ENST00000538173|EIF2S3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1039.585620105267	1	1038.58432	1037.57705	1.2052	0.0012517	0.16356	0.00016987	1.3688	0.0014216	1039.5901726581576	15.728	0.16483	16.767	16.696	16.861	1.0392					16	14	2	0	0	0	0.88055	1	6513	6513		8.5933	1.304	1	4982600	+		7476	9796	3613	3633	9249	9249					0.05976288636884419
GILSTVFLTL	10	Unmodified	_GILSTVFLTL_					0	0	0			REV__ENST00000479939.1_1_7:30062251-30066124:-|nuORF	REV__ENST00000479939.1_1_7:30062251-30066124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3239013552666	2	532.323525	1062.6325	2.9975	0.0015956	-0.17226	-9.1699E-05	2.8252	0.0015039	532.3237584775205	59.481	0.57289	61.45	61.067	61.64	1.969					46	18	3	0	0	0	0.068389	1	24958	24958		71.134	3.0529	1	16488000	+		7477	9202	3614	3634	9250	9250					0.10368657313983931
GILSVLRSVPL	11	Unmodified	_GILSVLRSVPL_					0	0	0			REV__ENST00000526443.5_1_11:14535901-14541492:-|nuORF	REV__ENST00000526443.5_1_11:14535901-14541492:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3697997927666	2	577.368798	1152.72304	4.5246	0.0026123	-2.7104	-0.0015649	1.8142	0.0010475	577.3671038935288	87.504	0.56018	88.596	88.335	88.895	1.0918					64	17	5	0	0	0	0.96769	1	36950	36950		5.7319	2.7366	1	32880000	+		7478	9746	3615	3635	9251	9251					0.15279126362293027
GINSIFLTIL	10	Unmodified	_GINSIFLTIL_					0	0	0			REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8300659060478	2	545.828975	1089.6434	1.3731	0.00074948	0.70203	0.00038319	2.0751	0.0011327	545.8292523276521	68.095	0.41151	68.095	67.915	68.327	0					36	12	4	0	0	0	0.065687	1	28390	28390		103.35	17.022	1	3505700	+		7479	9553	3616	3636	9252	9252					0.10216059688286805
GINSIFLTIL	10	Unmodified	_GINSIFLTIL_					0	0	0			REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.8300659060478	2	545.828975	1089.6434	1.7252	0.00094168	0.66206	0.00036137	2.3873	0.0013031	545.8291682662417	67.497	0.40701	67.82	67.619	68.026	0.32269					35	12	4	0	0	0	0.058152	2	28302	28262;28302		103.35	13.219	1	4161000	+		7480	9553	3616	3636	9253;9254	9254					0.10216059688286805
GINSIFLTIL	10	Unmodified	_GINSIFLTIL_					0	0	0			REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8298828005791	2	545.828975	1089.6434	1.8685	0.0010199	0.055015	3.0029E-05	1.9235	0.0010499	545.8288293706106	66.192	0.51363	67.581	67.36	67.874	1.3888					40	16	3	0	0	0	0.064287	1	27757	27757		114.65	7.7089	1	19446000	+		7481	9553	3616	3636	9255	9255					0.10216059688286805
GINSIFLTIL	10	Unmodified	_GINSIFLTIL_					0	0	0			REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	REV__ENST00000556668.1_1_14:75473249-75475888:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8299438357353	2	545.828975	1089.6434	1.7541	0.00095743	-0.99145	-0.00054116	0.76264	0.00041627	545.828438784151	65.687	0.54359	67.596	67.407	67.951	1.9085					42	17	3	0	0	0	0.058152	2	27601	27549;27601		103.35	6.9869	1	16207000	+		7482	9553	3616	3636	9256;9257	9257					0.10216059688286805
GIPHDSKK	8	Unmodified	_GIPHDSKK_					0	0	0		ENSG00000162526|ENST00000373534|TSSK3	ENSG00000162526|ENST00000373534|TSSK3	ENSG00000162526|ENST00000373534|TSSK3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	440.8448058962822	2	441.245609	880.476666	0.23874	0.00010534	1.5471	0.00068266	1.7859	0.00078801	441.24606390912896	15.066	0.59182	15.066	14.719	15.311	0					24	18	2	0	0	0	2.3239	1	6280	6280		5.2307	0	1	268660			7483	3624	3617	3637	9258	9258					0.031646315832290384
GIPIKKTK	8	Unmodified	_GIPIKKTK_					0	0	0		MBD4|p.Y485Ifs*6|1|0.11|ENSG00000129071|chr3:129433206-129433206|A/-|frameshift_variant;nc|ENSG00000129071|O95243-3|MBD4;nc|ENSG00000129071|O95243-5|MBD4;ENSG00000129071|ENST00000429544|MBD4;nc|ENSG00000129071|O95243|MBD4	MBD4|p.Y485Ifs*6|1|0.11|ENSG00000129071|chr3:129433206-129433206|A/-|frameshift_variant	MBD4|p.Y485Ifs*6|1|0.11|ENSG00000129071|chr3:129433206-129433206|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5949584841728	1	884.592764	883.585488	3.0212	0.0026726	-0.48466	-0.00042872	2.5366	0.0022438	884.5921396521824	106.15	0.19876	106.31	106.21	106.41	0.15781					38	10	5	0	0	0	0.89176	1	45372	45372		0.79363	0	1	651890000			7484	2391	3618	3638	9259	9259					0.13903842553497725
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2279235720634	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.819	1	78.819	78.319	79.319	0								0	0	0	0.66218	1	32810	32810		0.77653	0.14971	1				7485	7681	3619	3639	9260	9260					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2292358279228	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.22	1	79.22	78.72	79.72	0								0	0	0	0.66218	1	32984	32984		0.77653	0.21336	1				7486	7681	3619	3639	9261	9261					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2281677126884	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.838	1	79.838	79.338	80.338	0								0	0	0	0.66218	1	33244	33244		0.77653	0.27058	1				7487	7681	3619	3639	9262	9262					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2273132205009	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.361	1	80.361	79.861	80.861	0								0	0	0	0.66218	1	33462	33462		0.77653	0.21336	1				7488	7681	3619	3639	9263	9263					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2283203005791	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.281	1	86.281	85.781	86.781	0								0	0	0	0.66222	1	35954	35954		0.69767	0.07084	1				7489	7681	3619	3639	9264	9264					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2286865115166	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.623	1	87.623	87.123	88.123	0								0	0	0	0.66218	1	36621	36621		0.77653	0.078866	1				7490	7681	3619	3639	9265	9265					0.10253703876537656
GIPIRLSVHF	10	Unmodified	_GIPIRLSVHF_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|45|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281066775322	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.118	1	81.408	80.908	81.908	0.29056								0	0	0	0.66151	1	33911	33911		1.9064	0.9441	1				7491	7681	3619	3639	9266	9266					0.10253703876537656
GIPKRMSTL	9	Unmodified	_GIPKRMSTL_					0	0	0		nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000147862|O00712-4|NFIB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7936279177666	2	501.791869	1001.56919	2.337	0.0011727	0.23053	0.00011568	2.5675	0.0012883	501.79180630441834	73.103	0.38015	74.913	74.734	75.114	1.8101					24	11	3	0	0	0	0.44535	1	30699	30699		18.135	1.1927	1	2591300			7492	7893	3620	3640	9267	9267					0.06846393325110967
GIPVLSDVAKI	11	Unmodified	_GIPVLSDVAKI_					0	0	0			REV__ENST00000573189.2_1_16:72039593-72040031:-|nuORF	REV__ENST00000573189.2_1_16:72039593-72040031:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.3424560427666	2	556.339707	1110.66486	2.0785	0.0011563	1.6983	0.0009448	3.7767	0.0021011	556.3409613278841	87.397	0.76992	87.397	87.259	88.029	0					44	26	3	0	0	0	0.89563	1	36634	36634		10.074	2.1638	1	1976300	+		7493	10418	3621	3641	9268	9268					0.11395444716981729
GIPVLSDVAKI	11	Unmodified	_GIPVLSDVAKI_					0	0	0			REV__ENST00000573189.2_1_16:72039593-72040031:-|nuORF	REV__ENST00000573189.2_1_16:72039593-72040031:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	556.339707	1110.66486	2.5364	0.0014111	2.1469	0.0011944	4.6833	0.0026055	556.3411990872304	87.248	0.35551	87.492	87.385	87.74	0.24387	0.047522	0.00030415	NaN	10.074	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	579210	+		7494	10418	3621	3641							0.11395444716981729
GIQQFCDDL	9	Unmodified	_GIQQFCDDL_					0	0	0		ENSG00000043093|ENST00000292782|DCUN1D1;ENST00000460318.1_1_13:114134888-114138209:-|nuORF;nc|ENSG00000150401|Q6PH85-2|DCUN1D2;ENSG00000150401|ENST00000478244|DCUN1D2	ENSG00000043093|ENST00000292782|DCUN1D1	ENSG00000043093|ENST00000292782|DCUN1D1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1404907107353	2	519.731674	1037.4488	1.5946	0.00082874	-2.8704	-0.0014918	-1.2758	-0.00066309	519.7286547828461	83.801	0.19174	84.989	84.827	85.019	1.1879					6	5	2	0	0	0	0.11645	1	35103	35103		8.5933	2.2392	1	228020			7495	668	3622	3642	9269	9269					-0.06843059459174583
GIQRRHLQV	9	Unmodified	_GIQRRHLQV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8315917849541	2	553.830706	1105.64686	2.0306	0.0011246	-0.75446	-0.00041784	1.2761	0.00070677	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.76456	1	29774	29774		4.756	4.756	1	7375800			7496	6535	3623	3643	9270	9270					0.09826167305504896
GIQSQDSWSA	10	Unmodified	_GIQSQDSWSA_					0	0	0		ENST00000204615.11_1_3:184090388-184093318:-|nuORF	ENST00000204615.11_1_3:184090388-184093318:-|nuORF	ENST00000204615.11_1_3:184090388-184093318:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7438842654228	2	539.743628	1077.4727	2.2314	0.0012044	-1.2356	-0.00066692	0.99582	0.00053749	539.7426836169067	60.481	0.25321	60.809	60.696	60.949	0.32809					12	7	2	0	0	0	0.88022	1	25337	25337		3.5965	0	1	632860			7497	5510	3624	3644	9271	9271					-0.06293502701146281
GIQYLSDYL	9	Unmodified	_GIQYLSDYL_					0	0	0		ENST00000440748.1_1_7:37415149-37415623:+|nuORF	ENST00000440748.1_1_7:37415149-37415623:+|nuORF	ENST00000440748.1_1_7:37415149-37415623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2776367068291	2	536.27149	1070.52843	1.0433	0.00055949	3.6543	0.0019597	4.6976	0.0025192	536.2739436372027	58.083	0.39674	60.052	59.784	60.181	1.969					15	12	2	0	0	0	0.34572	1	24385	24385		23.148	0	1	1873500			7498	6553	3625	3645	9272	9272					-0.004016695135305781
GIRRVKPKRT	10	Unmodified	_GIRRVKPKRT_					0	0	0		SCYL1-FRMD8|1|fusion;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8;ENSG00000126391|ENST00000317568|FRMD8;SCYL1-FRMD8|2|fusion	SCYL1-FRMD8|1|fusion	SCYL1-FRMD8|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	404.2652160525322	3	404.266679	1209.77821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.35	1	100.42	99.92	100.92	0.072716								0	0	0	0.66227	1	42012	42012		0.62683	0.41997	1				7499	2306	3626	3646	9273	9273					0.18170977673389643
GISAVAVLG	9	Unmodified	_GISAVAVLG_					0	0	0			REV__tr|A0A7D6ZQV5|A0A7D6ZQV5_9CLOTDUF1538domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01920PE=4SV=1	REV__tr|A0A7D6ZQV5|A0A7D6ZQV5_9CLOTDUF1538domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01920PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	786.4705688357353	1	786.47198	785.464704	1.9181	0.0015085	-0.64878	-0.00051024	1.2693	0.00099829	786.4713371980562	65.363	0.22332	65.69	65.517	65.74	0.32689					11	6	2	0	0	0	0.087207	1	27368	27368		53.576	6.6547	1	572280	+		7500	15685	3627	3647	9274	9274					0.06339014840034451
GISPTRQVFF	10	Unmodified	_GISPTRQVFF_					0	0	0		ENST00000545209.1_1_12:121202804-121206399:-|nuORF	ENST00000545209.1_1_12:121202804-121206399:-|nuORF	ENST00000545209.1_1_12:121202804-121206399:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.8150512576103	2	576.314023	1150.61349	0.50543	0.00029129	-2.6181	-0.0015088	-2.1126	-0.0012175	576.3124568732056	20.628	0.50461	20.838	20.63	21.135	0.21024					32	15	3	0	0	0	0.846	1	8585	8585		7.2892	1.5574	1	966280			7501	7235	3628	3648	9275	9275					0.04421120742927087
GISPTRQVFF	10	Unmodified	_GISPTRQVFF_					0	0	0		ENST00000545209.1_1_12:121202804-121206399:-|nuORF	ENST00000545209.1_1_12:121202804-121206399:-|nuORF	ENST00000545209.1_1_12:121202804-121206399:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3123046755791	2	576.314023	1150.61349	0.39455	0.00022739	-2.0055	-0.0011558	-1.611	-0.00092842	576.3128609386288	19.377	0.35479	20.901	20.753	21.108	1.5237					23	11	3	0	0	0	0.87343	1	8102	8102		4.3292	0.38484	1	841280			7502	7235	3628	3648	9276	9276					0.04421120742927087
GISVLAKVKGF	11	Unmodified	_GISVLAKVKGF_					0	0	0		tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	559.3011352419853	2	559.850242	1117.68593	2.372	0.001328	1.4113	0.00079013	3.7834	0.0021181	559.8512364820022	71.263	0.17624	72.605	72.482	72.658	1.3415					9	5	2	0	0	0	0.14606	1	29875	29875		10.074	1.4806	1	495550			7503	16809	3629	3649	9277	9277					0.13179454816531688
GITPELSII	9	Unmodified	_GITPELSII_					0	0	0		tr|A0A553SRW8|A0A553SRW8_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_02015PE=4SV=1	tr|A0A553SRW8|A0A553SRW8_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_02015PE=4SV=1	tr|A0A553SRW8|A0A553SRW8_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_02015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7802612185478	2	471.778951	941.543348	3.0825	0.0014543	-0.47849	-0.00022574	2.604	0.0012285	471.7787606076431	76.408	0.44368	78.175	77.845	78.288	1.7672					23	13	2	0	0	0	0.11478	1	32013	32013		44.407	2.3125	1	3029400			7504	16582	3630	3650	9278	9278					0.070238223544834
GITVLHHV	8	Unmodified	_GITVLHHV_					0	0	0			REV__ENST00000547138.5_1_12:50529516-50531570:-|nuORF	REV__ENST00000547138.5_1_12:50529516-50531570:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	437.7585937380791	2	438.25852	874.502486	2.7996	0.001227	-1.7645	-0.00077332	1.0351	0.00045365	438.25803794770417	76.408	0.28833	78.175	78.033	78.321	1.7672					13	8	2	0	0	0	2.3239	1	32048	32048		34.187	6.0141	1	2347400	+		7505	10106	3631	3651	9279	9279					0.06021525825519802
GIVGMSHC	8	Unmodified	_GIVGMSHC_					0	0	0		ENST00000373871.7_1_1:28299377-28299578:-|nuORF	ENST00000373871.7_1_1:28299377-28299578:-|nuORF	ENST00000373871.7_1_1:28299377-28299578:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1801635622978	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.746	1	28.018	27.518	28.518	1.2715								0	0	0	1.0178	1	11201	11201		0.79363	0	1				7506	6165	3632	3652	9280	9280					-0.06250004011769761
GIVGMSHC	8	Unmodified	_GIVGMSHC_					0	0	0		ENST00000373871.7_1_1:28299377-28299578:-|nuORF	ENST00000373871.7_1_1:28299377-28299578:-|nuORF	ENST00000373871.7_1_1:28299377-28299578:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1782714724541	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.99	1	28.261	27.761	28.761	1.2715								0	0	0	1.0178	1	11306	11306		0.79363	0	1				7507	6165	3632	3652	9281	9281					-0.06250004011769761
GIVTTFVLTI	10	Unmodified	_GIVTTFVLTI_					0	0	0		ENSG00000170412|ENST00000392627|GPRC5C;nc|ENSG00000170412|Q9NQ84-2|GPRC5C	ENSG00000170412|ENST00000392627|GPRC5C	ENSG00000170412|ENST00000392627|GPRC5C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3239013552666	2	532.323525	1062.6325	2.5536	0.0013593	-0.95592	-0.00050886	1.5976	0.00085046	532.3229613507932	60.015	0.47913	61.435	61.176	61.656	1.4196					44	15	4	0	0	0	0.068389	1	25173	25173		71.134	0	1	16625000			7508	4144	3633	3653	9282	9282					0.10368657313983931
GIWEGIVRP	9	Unmodified	_GIWEGIVRP_					0	0	0			REV__nc|nan|Q49A92-3|C8orf34	REV__nc|nan|Q49A92-3|C8orf34	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.5475036501884	3	342.862548	1025.56581	0.64639	0.00022162	2.0335	0.00069719	2.6798	0.00091882	342.8631649873456	29.567	0.4273	29.846	29.59	30.017	0.2793					41	13	4	0	0	0	0.11901	1	12308	12308		2.7352	0	1	7611400	+		7509	10764	3634	3654	9283	9283					0.05405466542742943
GIWGFIKGV	9	Unmodified	_GIWGFIKGV_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1;nc|ENSG00000164244|Q96M27-4|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	488.7840453982353	2	488.78437	975.554188	1.498	0.0007322	-1.8922	-0.00092489	-0.39421	-0.00019268	488.78332150268847	70.535	0.47671	70.535	70.303	70.78	0					29	15	2	0	0	0	0.09539	3	29394	29343;29394;29447		50.855	23.226	1	1824700			7510	3763	3635	3655	9284;9285;9286	9285					0.06543269519420392
GIWGFIKGV	9	Unmodified	_GIWGFIKGV_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1;nc|ENSG00000164244|Q96M27-4|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	488.7852966189384	2	488.78437	975.554188	1.9931	0.00097417	0.032346	1.581E-05	2.0254	0.00098998	488.7843352009102	69.857	0.52855	70.179	70.002	70.53	0.32224					36	16	3	0	0	0	0.09539	3	29265	29220;29265;29326		50.855	14.389	1	2127200			7511	3763	3635	3655	9287;9288;9289	9288					0.06543269519420392
GIWGFIKGV	9	Unmodified	_GIWGFIKGV_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1;nc|ENSG00000164244|Q96M27-4|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.7852966189384	2	488.78437	975.554188	2.1693	0.0010603	-0.098224	-4.801E-05	2.071	0.0010123	488.7838692508139	68.737	0.56844	70.103	69.875	70.443	1.3657					46	17	3	0	0	0	0.046276	3	28815	28815;28861;28909		70.716	32.564	1	4819800			7512	3763	3635	3655	9290;9291;9292	9290					0.06543269519420392
GIWGFIKGV	9	Unmodified	_GIWGFIKGV_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1;nc|ENSG00000164244|Q96M27-4|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7851745486259	2	488.78437	975.554188	2.3248	0.0011363	-0.06665	-3.2578E-05	2.2582	0.0011038	488.78403154017786	68.122	0.68983	69.992	69.736	70.426	1.87					53	21	4	0	0	0	0.046276	3	28601	28553;28601;28660		70.716	32.564	1	5063000			7513	3763	3635	3655	9293;9294;9295	9294					0.06543269519420392
GIYQKAIEVL	10	Unmodified	_GIYQKAIEVL_					0	0	0		ENST00000595288.5_1_19:7685297-7685959:-|nuORF;ENST00000600230.1_1_19:7685297-7686162:-|nuORF;ENSG00000076924|ENST00000358368|XAB2	ENST00000595288.5_1_19:7685297-7685959:-|nuORF	ENST00000595288.5_1_19:7685297-7685959:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3317748904228	2	567.331882	1132.64921	1.3794	0.00078255	-2.7982	-0.0015875	-1.4188	-0.00080495	567.3305498186903	71.32	1.1118	73.144	72.458	73.57	1.824					57	35	2	0	0	0	0.85124	1	30000	30000		6.7232	0.51738	1	3066800			7514	950	3636	3656	9296	9296					0.0881915819995811
GKAGKGGG	8	Unmodified	_GKAGKGGG_					0	0	0		ENST00000469080.5_1_X:47104878-47106896:+|nuORF	ENST00000469080.5_1_X:47104878-47106896:+|nuORF	ENST00000469080.5_1_X:47104878-47106896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3557006716728	1	631.3522	630.344923	2.3047	0.0014551	2.4193	0.0015274	4.724	0.0029825	631.3535362140738	50.707	0.53918	50.707	50.373	50.913	0					21	16	2	0	0	0	0.89178	1	21196	21196		0.69038	0	1	1344600			7515	6723	3637	3657	9297	9297					0.014964462861485117
GKAKGFLG	8	Unmodified	_GKAKGFLG_					0	0	0			REV__ENST00000396908.8_2_19:36259471-36259852:+|nuORF	REV__ENST00000396908.8_2_19:36259471-36259852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.4650756716728	1	777.46175	776.454474	2.6189	0.0020361	2.652	0.0020618	5.2709	0.004098	777.4635177115023	108.92	0.91776	109.08	108.67	109.58	0.15898					86	44	2	0	0	0	0.89178	1	47118	47118		0.69038	0	1	18832000	+		7516	12857	3638	3658	9298	9298					0.057304519054810044
GKDTQILLV	9	Unmodified	_GKDTQILLV_					0	0	0			REV__nc|ENSG00000197748|Q8NDM7-4|CFAP43	REV__nc|ENSG00000197748|Q8NDM7-4|CFAP43	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5955078005791	1	986.588073	985.580796	5.2901	0.0052191	-0.74623	-0.00073622	4.5438	0.0044829	986.5855770478908	92.386	0.39262	93.322	93.114	93.506	0.93624					25	11	3	0	0	0	0.18809	1	38910	38910		34.402	6.7729	1	2826200	+		7517	11689	3639	3659	9299	9299					0.08742913620096715
GKEFHKLAV	9	Unmodified	_GKEFHKLAV_					0	0	0			REV__tr|A0A7D6VQ83|A0A7D6VQ83_9CLOTRibose5-phosphateisomeraseBOS=ClostridiumintestinaleOX=36845GN=rpiBPE=3SV=1	REV__tr|A0A7D6VQ83|A0A7D6VQ83_9CLOTRibose5-phosphateisomeraseBOS=ClostridiumintestinaleOX=36845GN=rpiBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.5348388552666	3	343.534431	1027.58147	0.083565	2.8707E-05	1.0256	0.00035233	1.1092	0.00038104	343.5347591249794	25.13	0.63678	26.39	26.195	26.832	1.2594					35	20	2	0	0	0	0.77876	1	10551	10551		4.1895	1.691	1	3571600	+		7518	15378	3640	3660	9300	9300					0.06877753059779934
GKFIAFYLL	9	Unmodified	_GKFIAFYLL_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3164550662041	2	536.315503	1070.61645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.333	1	79.084	78.584	79.584	1.7514								0	0	0	0.41514	1	32430	32430		7.2892	0.56607	1				7519	1202	3641	3661	9301	9301					0.08396995867747137
GKGAKRSP	8	Unmodified	_GKGAKRSP_					0	0	0			REV__HERVH-int_dup82|chr1:53424769-53427698:+|2.2654386177007835|0.0864871400321217|4.71|417.0|102|1|anti-sense	REV__HERVH-int_dup82|chr1:53424769-53427698:+|2.2654386177007835|0.0864871400321217|4.71|417.0|102|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	800.5723754763603	1	800.473712	799.466435	3.6788	0.0029448	2.2276	0.0017831	5.9063	0.0047279	800.47565426347	94.911	0.098763	95.652	95.582	95.681	0.74124					5	3	2	0	0	0	2.3239	1	39930	39930		3.5965	0	1	1992300	+		7520	8224	3642	3662	9302	9302					0.05868068648658209
GKGAPRRG	8	Unmodified	_GKGAPRRG_					0	0	0		ENSG00000070193|ENST00000264664|FGF10	ENSG00000070193|ENST00000264664|FGF10	ENSG00000070193|ENST00000264664|FGF10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7388488650322	2	399.738286	797.462019	0.079915	3.1945E-05	1.1161	0.00044616	1.196	0.00047811	399.7387640923591	68.605	0.53471	68.605	68.359	68.893	0					47	16	4	0	0	0	0.89051	1	28593	28593		2.3027	0	1	14166000			7521	848	3643	3663	9303	9303					0.055186042257560075
GKGARPLV	8	Unmodified	_GKGARPLV_					0	0	0			REV__ENST00000339560.9_1_19:14048664-14049262:-|nuORF	REV__ENST00000339560.9_1_19:14048664-14049262:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2505981326103	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.13	1	90.13	89.63	90.63	0								0	0	0	1.0178	1	37669	37669		2.5775	0	1		+		7522	12490	3644	3664	9304	9304					0.08553543171080946
GKGARRLG	8	Unmodified	_GKGARRLG_					0	0	0		ENST00000592974.5_1_17:40825317-40826415:-|nuORF;nc|ENSG00000068137|Q7Z736-4|PLEKHH3;ENST00000456950.6_1_17:40821512-40828020:-|nuORF;nc|ENSG00000068137|Q7Z736-3|PLEKHH3;nc|ENSG00000068137|Q7Z736-2|PLEKHH3;ENST00000591490.5_1_17:40821740-40828722:-|nuORF;ENSG00000068137|ENST00000591022|PLEKHH3	ENST00000592974.5_1_17:40825317-40826415:-|nuORF	ENST00000592974.5_1_17:40825317-40826415:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	407.7552062869072	2	407.753936	813.493319	2.1552	0.00087878	0.36235	0.00014775	2.5175	0.0010265	407.75426115360494	61.68	0.55722	62.01	61.796	62.353	0.32974					29	17	3	0	0	0	0.89051	1	25865	25865		2.3027	0	1	938780			7523	829	3645	3665	9305	9305					0.07911177259848046
GKGCHSGN	8	Unmodified	_GKGCHSGN_					0	0	0			REV__ENST00000494293.1_1_1:26146491-26149675:+|nuORF	REV__ENST00000494293.1_1_1:26146491-26149675:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.1624023318291	2	380.163762	758.312971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.39	1	55.39	54.89	55.89	0								0	0	0	1.0178	1	23073	23073		2.3027	2.3027	1		+		7524	13452	3646	3666	9306	9306					-0.07585289459314026
GKGCKKKKKK	10	Unmodified	_GKGCKKKKKK_					0	0	0			REV__L1MD1_dup3486|chr9:6488282-6488529:-|1.1290293695577864|0.0199908630641251|5.82|429.0|16|3|anti-sense	REV__L1MD1_dup3486|chr9:6488282-6488529:-|1.1290293695577864|0.0199908630641251|5.82|429.0|16|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2509338259697	3	378.249749	1131.72742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.741	1	99.741	99.241	100.24	0								0	0	0	0.66255	1	41751	41751		0.13989	0.13989	1		+		7525	14281	3647	3667	9307	9307					0.16682312304192237
GKGCMPNP	8	Unmodified	_GKGCMPNP_					0	0	0			REV__NPC1|p.K1010M|1|0.05|ENSG00000141458|chr18:23538554-23538554|T/A|missense_variant	REV__NPC1|p.K1010M|1|0.05|ENSG00000141458|chr18:23538554-23538554|T/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1801940798759	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.766	1	58.181	57.681	58.681	1.4145								0	0	0	1.0178	1	23791	23791		2.3027	1.5091	1		+		7526	14584	3648	3668	9308	9308					-0.06250004011769761
GKGFDWPLL	9	Unmodified	_GKGFDWPLL_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB;nc|ENSG00000169919|P08236-3|GUSB	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.2278015017509	3	344.855282	1031.54402	-1.0784	-0.00037188	2.2954	0.00079159	1.2171	0.00041971	344.8558399897956	49.838	0.79969	49.838	49.413	50.212	0					37	26	2	0	0	0	0.11941	1	20800	20800		1.0715	0.83562	1	588990			7527	4120	3649	3669	9309	9309					0.029506617941933655
GKGFIGSQ	8	Unmodified	_GKGFIGSQ_					0	0	0			REV__ENST00000558825.5_1_15:91337395-91358506:+|nuORF	REV__ENST00000558825.5_1_15:91337395-91358506:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2149841189384	2	397.213778	792.413003	0.054481	2.1641E-05	2.1295	0.00084587	2.184	0.00086751	397.21474426386453	67.632	0.44196	67.632	67.441	67.883	0					29	13	3	0	0	0	0.89051	2	28146	28146;28195		2.3027	0	1	1154100	+		7528	11667	3650	3670	9310;9311	9310					0.008492711461599356
GKGFIGSQ	8	Unmodified	_GKGFIGSQ_					0	0	0			REV__ENST00000558825.5_1_15:91337395-91358506:+|nuORF	REV__ENST00000558825.5_1_15:91337395-91358506:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	397.2145873904228	2	397.213778	792.413003	1.5355	0.00060992	1.3711	0.00054461	2.9066	0.0011545	397.21468738788	68.83	0.65696	69.153	68.905	69.562	0.32223					46	20	3	0	0	0	0.89051	2	28791	28791;28853		2.3027	0	1	1046700	+		7529	11667	3650	3670	9312;9313	9312					0.008492711461599356
GKGGGKGP	8	Unmodified	_GKGGGKGP_					0	0	0			REV__DHX57|p.V297Dfs*38|1|0.04|ENSG00000163214|chr2:38861520-38861520|A/-|frameshift_variant	REV__DHX57|p.V297Dfs*38|1|0.04|ENSG00000163214|chr2:38861520-38861520|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.0701476931572	2	329.187563	656.360573	-1.8111	-0.0005962	0.13462	4.4314E-05	-1.6765	-0.00055189	329.1875011918053	56.157	0.40063	56.157	55.97	56.371	0					23	13	2	0	0	0	2.3239	1	23473	23473		0.69038	0	1	7836400	+		7530	8442	3651	3671	9314	9314					0.018647328031875077
GKGGSRAA	8	Unmodified	_GKGGSRAA_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	352.1962158083916	2	352.195919	702.377286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.259	1	76.581	76.081	77.081	0.32163								0	0	0	1.0178	1	31896	31896		0.69038	0	1				7531	4452	3652	3672	9315	9315					0.014192336891255763
GKGHSPGR	8	Unmodified	_GKGHSPGR_					0	0	0			REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2153198122978	2	398.214643	794.414734	-0.010828	-4.3118E-06	1.7041	0.00067859	1.6933	0.00067428	398.21526851632717	70.194	0.4981	70.194	69.866	70.364	0					37	15	4	0	0	0	0.88663	1	29263	29263		4.756	2.4533	1	5862900	+		7532	13031	3653	3673	9316	9316					0.009303249547656378
GKGHSPGR	8	Unmodified	_GKGHSPGR_					0	0	0			REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	398.214643	794.414734	-0.010828	-4.3118E-06	1.7041	0.00067859	1.6933	0.00067428	398.21526851632717	70.194	0.4981	70.194	69.866	70.364	0	-0.24745	0.00056988	NaN	4.756	37	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5862900	+		7533	13031	3653	3673							0.009303249547656378
GKGHSPGR	8	Unmodified	_GKGHSPGR_					0	0	0			REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	REV__ENST00000431648.8_2_18:14189184-14208232:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	398.214643	794.414734	1.4919	0.0005941	0.38208	0.00015215	1.874	0.00074625	398.2147183091544	69.179	0.53235	70.545	70.284	70.817	1.3657	0.10352	-0.00048301	NaN	4.756	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9954800	+		7534	13031	3653	3673							0.009303249547656378
GKGKIDVL	8	Unmodified	_GKGKIDVL_					0	0	0		tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2597228884697	2	415.260728	828.506903	1.7158	0.00071252	-3.2784	-0.0013614	-1.5626	-0.00064889	415.2591536787977	76.968	0.44868	78.728	78.506	78.955	1.7598					29	13	3	0	0	0	0.89051	1	32321	32321		2.3027	1.6124	1	1640900			7535	17190	3654	3674	9317	9317					0.08578990248417995
GKGKKSTD	8	Unmodified	_GKGKKSTD_					0	0	0			REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.7309448122978	2	410.729792	819.445031	1.7271	0.00070937	-0.62671	-0.00025741	1.1004	0.00045196	410.72900376975093	68.568	0.34113	68.891	68.657	68.998	0.32224					18	10	2	0	0	0	0.8909	1	28660	28660		2.0598	1.2661	1	802490	+		7536	9023	3655	3675	9318	9318					0.028086388292877018
GKGKKSTD	8	Unmodified	_GKGKKSTD_					0	0	0			REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	410.729792	819.445031	0.39003	0.0001602	-0.028176	-1.1573E-05	0.36186	0.00014862	410.729310466655	68.604	0.34621	68.604	68.453	68.799	0	-0.14327	0.00018208	NaN	2.0598	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	623990	+		7537	9023	3655	3675							0.028086388292877018
GKGKKSTD	8	Unmodified	_GKGKKSTD_					0	0	0			REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	410.729792	819.445031	1.7271	0.00070937	-0.62671	-0.00025741	1.1004	0.00045196	410.72900376975093	68.568	0.34113	68.891	68.657	68.998	0.32224	0.14327	-0.00030959	NaN	2.0598	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802490	+		7538	9023	3655	3675							0.028086388292877018
GKGKMFMC	8	Unmodified	_GKGKMFMC_					0	0	0			REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1426574587822	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.366	1	80.656	80.156	81.156	0.29056								0	0	0	1.0178	1	33596	33596		0.40072	0	1		+		7539	12939	3656	3676	9319	9319					-0.05219913815653854
GKGKMFMC	8	Unmodified	_GKGKMFMC_					0	0	0			REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1420471072197	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.444	1	55.848	55.348	56.348	1.4048								0	0	0	1.0178	1	22787	22787		0.40072	0	1		+		7540	12939	3656	3676	9320	9320					-0.05219913815653854
GKGKMFMC	8	Unmodified	_GKGKMFMC_					0	0	0			REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414977908134	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.434	1	82.667	82.167	83.167	1.2332								0	0	0	1.0178	1	34187	34187		0.40072	0	1		+		7541	12939	3656	3676	9321	9321					-0.05219913815653854
GKGKMFMC	8	Unmodified	_GKGKMFMC_					0	0	0			REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1421081423759	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.006	1	94.747	94.247	95.247	0.74124								0	0	0	1.0178	1	39555	39555		0.40072	0	1		+		7542	12939	3656	3676	9322	9322					-0.05219913815653854
GKGKMFMC	8	Unmodified	_GKGKMFMC_					0	0	0			REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	REV__ENST00000415083.6_1_18:23597971-23598028:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1428405642509	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.519	1	41.381	40.881	41.881	1.8624								0	0	0	1.0178	1	16568	16568		0.40072	0	1		+		7543	12939	3656	3676	9323	9323					-0.05219913815653854
GKGKPRARGIP	11	Unmodified	_GKGKPRARGIP_					0	0	0		ENSG00000100167|ENST00000644076|SEPTIN3	ENSG00000100167|ENST00000644076|SEPTIN3	ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5722228884697	3	379.57188	1135.69381	1.7272	0.00065561	-1.1583	-0.00043965	0.56896	0.00021596	379.5713068289144	76.81	0.48045	78.577	78.353	78.834	1.7672					27	14	2	0	0	0	1.0365	1	32236	32236		1.2148	0.14337	1	1201800			7544	1249	3657	3677	9324	9324					0.1313902685665198
GKGKRNFA	8	Unmodified	_GKGKRNFA_					0	0	0		ENST00000302424.11_1_10:104417711-104417816:+|nuORF	ENST00000302424.11_1_10:104417711-104417816:+|nuORF	ENST00000302424.11_1_10:104417711-104417816:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2533447146416	2	439.253769	876.492984	2.7573	0.0012112	-2.5193	-0.0011066	0.23804	0.00010456	439.25206732274063	72.031	0.48639	73.855	73.57	74.056	1.824					31	15	3	0	0	0	0.89008	1	30185	30185		2.5775	0.27475	1	9800100			7545	5763	3658	3678	9325	9325					0.049797575399907146
GKGLGKGG	8	Unmodified	_GKGLGKGG_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000275663|ENST00000611444|H4C7	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MSMS	GG20161007_CRH_Patient100_A02_01	1	337.2037536501884	2	337.203213	672.391873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.459	1	64.459	63.959	64.959	0								0	0	0	1.0178	1	26871	26871		0.69038	0	1				7546	3501	3659	3679	9326	9326					0.042573058372909145
GKGLGKGG	8	Unmodified	_GKGLGKGG_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3;ENSG00000275663|ENST00000611444|H4C7	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MSMS	GG20161007_CRH_Patient100_A02_01	1	337.2042419314384	2	337.203213	672.391873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.62	1	64.62	64.12	65.12	0								0	0	0	1.0178	1	26935	26935		0.69038	0	1				7547	3501	3659	3679	9327	9327					0.042573058372909145
GKGLLAPL	8	Unmodified	_GKGLLAPL_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	384.2968017458916	2	384.752539	767.490525	1.9642	0.00075574	-2.0779	-0.00079946	-0.11365	-4.3727E-05	384.7511837698875	83.002	0.55602	84.215	83.92	84.476	1.2125					21	17	2	0	0	0	2.3239	1	34905	34905		0	0	1	790170			7548	5792	3660	3680	9328	9328					0.0974790908230716
GKGLLAPL	8	Unmodified	_GKGLLAPL_					0	0	0		ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	ENST00000308893.8_1_16:29985383-29985953:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	384.2967101931572	2	384.752539	767.490525	2.5097	0.00096562	-4.1953	-0.0016141	-1.6856	-0.00064853	384.7505145306228	82.672	0.3983	84.342	84.081	84.48	1.67					18	12	2	0	0	0	2.3239	1	34631	34631		0	0	1	1186600			7549	5792	3660	3680	9329	9329					0.0974790908230716
GKGNTVPL	8	Unmodified	_GKGNTVPL_					0	0	0			REV__nc|ENSG00000071564|P15923-2|TCF3	REV__nc|ENSG00000071564|P15923-2|TCF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2283813357353	2	393.229428	784.444303	-0.014184	-5.5775E-06	-2.1787	-0.00085674	-2.1929	-0.00086231	393.2284845639437	66.653	0.57468	66.653	66.35	66.924	0					35	17	3	0	0	0	0.8909	1	27718	27718		2.0598	0	1	6423000	+		7550	8727	3661	3681	9330	9330					0.04345844180215863
GKGPAAPL	8	Unmodified	_GKGPAAPL_					0	0	0			REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	355.7122070193291	2	355.713414	709.412274	-0.60313	-0.00021454	-1.7624	-0.0006269	-2.3655	-0.00084144	355.71282830834576	61.537	0.47302	61.537	61.331	61.804	0					34	14	3	0	0	0	0.89178	1	25622	25622		0.69038	0	1	9138200	+		7551	10441	3662	3682	9331	9331					0.04594476497072719
GKGPAAPL	8	Unmodified	_GKGPAAPL_					0	0	0			REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	355.7123901247978	2	355.713414	709.412274	1.7557	0.00062453	-3.3916	-0.0012064	-1.6359	-0.00058191	355.7122667858748	60.453	0.52407	61.873	61.597	62.121	1.4196					38	16	3	0	0	0	0.89178	1	25309	25309		0.69038	0	1	5771600	+		7552	10441	3662	3682	9332	9332					0.04594476497072719
GKGPAAPL	8	Unmodified	_GKGPAAPL_					0	0	0			REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	REV__nc|ENSG00000153064|Q8NDB2-4|BANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	355.7125732302666	2	355.713414	709.412274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.44	1	59.858	59.358	60.358	1.4181								0	0	0	1.0178	1	24503	24503		0.69038	0	1		+		7553	10441	3662	3682	9333	9333					0.04594476497072719
GKGPIRGW	8	Unmodified	_GKGPIRGW_					0	0	0		ENST00000342112.9_1_9:101006372-101017832:-|nuORF;TBC1D2|p.Q313Lfs*43|1|0.05|ENSG00000095383|chr9:98228992-98228993|-/ATCA|frameshift_variant;TBC1D2|p.Q313Hfs*44|1|0.06|ENSG00000095383|chr9:98228991-98228992|-/GCCCAGA|frameshift_variant;nc|ENSG00000095383|Q9BYX2-3|TBC1D2;nc|ENSG00000095383|Q9BYX2-2|TBC1D2;ENSG00000095383|ENST00000465784|TBC1D2	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7525207400322	2	435.750862	869.487171	1.4128	0.00061564	2.5937	0.0011302	4.0066	0.0017459	435.751903025503	64.36	0.73857	64.36	63.983	64.722	0					51	22	3	0	0	0	0.88663	1	26882	26882		4.756	2.4533	1	3672300			7554	1186	3663	3683	9334	9334					0.047206590283167316
GKGPIRGW	8	Unmodified	_GKGPIRGW_					0	0	0		ENST00000342112.9_1_9:101006372-101017832:-|nuORF;TBC1D2|p.Q313Lfs*43|1|0.05|ENSG00000095383|chr9:98228992-98228993|-/ATCA|frameshift_variant;TBC1D2|p.Q313Hfs*44|1|0.06|ENSG00000095383|chr9:98228991-98228992|-/GCCCAGA|frameshift_variant;nc|ENSG00000095383|Q9BYX2-3|TBC1D2;nc|ENSG00000095383|Q9BYX2-2|TBC1D2;ENSG00000095383|ENST00000465784|TBC1D2	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7528259158134	2	435.750862	869.487171	3.0613	0.001334	1.6333	0.0007117	4.6946	0.0020457	435.7513965074529	62.348	0.62634	63.766	63.365	63.992	1.4177					48	19	3	0	0	0	0.88663	2	26093	26093;26135		4.756	2.1785	1	4701700			7555	1186	3663	3683	9335;9336	9335					0.047206590283167316
GKGPIRGW	8	Unmodified	_GKGPIRGW_					0	0	0		ENST00000342112.9_1_9:101006372-101017832:-|nuORF;TBC1D2|p.Q313Lfs*43|1|0.05|ENSG00000095383|chr9:98228992-98228993|-/ATCA|frameshift_variant;TBC1D2|p.Q313Hfs*44|1|0.06|ENSG00000095383|chr9:98228991-98228992|-/GCCCAGA|frameshift_variant;nc|ENSG00000095383|Q9BYX2-3|TBC1D2;nc|ENSG00000095383|Q9BYX2-2|TBC1D2;ENSG00000095383|ENST00000465784|TBC1D2	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	ENST00000342112.9_1_9:101006372-101017832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7526733279228	2	435.750862	869.487171	2.5781	0.0011234	1.7084	0.00074444	4.2865	0.0018678	435.7514947311532	61.684	0.6664	63.641	63.241	63.908	1.9571					51	20	3	0	0	0	0.88663	1	25885	25885		4.756	4.756	1	4444500			7556	1186	3663	3683	9337	9337					0.047206590283167316
GKGPKVHLF	9	Unmodified	_GKGPKVHLF_					0	0	0			REV__tr|A0A7D6VMS5|A0A7D6VMS5_9CLOTElongationfactorPOS=ClostridiumintestinaleOX=36845GN=efpPE=3SV=1	REV__tr|A0A7D6VMS5|A0A7D6VMS5_9CLOTElongationfactorPOS=ClostridiumintestinaleOX=36845GN=efpPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7959777712822	2	491.795269	981.575986	0.65487	0.00032206	1.7203	0.00084602	2.3751	0.0011681	491.7957261214561	32.11	0.38503	33.391	33.202	33.587	1.2813					27	13	3	0	0	0	0.68551	1	13469	13469		7.9102	2.6795	1	4557600	+		7557	15322	3664	3684	9338	9338					0.08446074267988024
GKGPKVHLF	9	Unmodified	_GKGPKVHLF_					0	0	0			REV__tr|A0A7D6VMS5|A0A7D6VMS5_9CLOTElongationfactorPOS=ClostridiumintestinaleOX=36845GN=efpPE=3SV=1	REV__tr|A0A7D6VMS5|A0A7D6VMS5_9CLOTElongationfactorPOS=ClostridiumintestinaleOX=36845GN=efpPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7962829470634	2	491.795269	981.575986	0.99066	0.0004872	1.3367	0.00065739	2.3274	0.0011446	491.7956159473475	31.524	0.35549	33.349	33.155	33.51	1.8246					23	12	3	0	0	0	0.68551	1	13218	13218		7.9102	2.6795	1	3409100	+		7558	15322	3664	3684	9339	9339					0.08446074267988024
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7462646365166	2	412.746111	823.477669	0.58265	0.00024049	1.0135	0.00041833	1.5962	0.00065882	412.7465388548211	65.913	0.479	65.913	65.644	66.123	0					43	14	4	0	0	0	0.89051	1	27522	27522		2.3027	0	1	23193000	+		7559	12683	3665	3685	9340	9340					0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7473632693291	2	412.746111	823.477669	0.4205	0.00017356	0.34555	0.00014262	0.76605	0.00031618	412.74625749755745	69.219	0.37141	69.219	68.955	69.326	0					17	11	2	0	0	0	0.89051	1	28820	28820		2.3027	0	1	856540	+		7560	12683	3665	3685	9341	9341					0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7476074099541	2	412.746111	823.477669	2.1362	0.00088169	0.0042341	1.7476E-06	2.1404	0.00088344	412.7463290213709	62.071	0.43883	62.401	62.165	62.604	0.32974					19	13	2	0	0	0	0.89051	1	25973	25973		2.3027	0	1	916750	+		7561	12683	3665	3685	9342	9342					0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7459289431572	2	412.746111	823.477669	1.6513	0.00068157	0.6073	0.00025066	2.2586	0.00093223	412.74626758539716	68.999	0.43719	69.321	69.094	69.532	0.32224					19	13	2	0	0	0	0.89051	1	28858	28858		2.3027	0	1	772740	+		7562	12683	3665	3685	9343	9343					0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.746111	823.477669	0.4205	0.00017356	0.34555	0.00014262	0.76605	0.00031618	412.74625749755745	69.219	0.37141	69.219	68.955	69.326	0	-0.13082	0.00018481	NaN	2.3027	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	856540	+		7563	12683	3665	3685							0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.746111	823.477669	1.6513	0.00068157	0.6073	0.00025066	2.2586	0.00093223	412.74626758539716	68.999	0.43719	69.321	69.094	69.532	0.32224	-0.028248	0.00040088	NaN	2.3027	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	772740	+		7564	12683	3665	3685							0.05886890742806372
GKGPRPRG	8	Unmodified	_GKGPRPRG_					0	0	0			REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	REV__ENST00000372718.7_1_1:40839538-40839793:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	412.746111	823.477669	1.7131	0.00070709	-1.971	-0.00081353	-0.25789	-0.00010644	412.7454109980819	67.639	0.34296	69.509	69.331	69.674	1.87	0.15907	-0.0017275	NaN	2.3027	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	469090	+		7565	12683	3665	3685							0.05886890742806372
GKGRGGEH	8	Unmodified	_GKGRGGEH_					0	0	0			REV__ENST00000393640.8_1_16:70432458-70432647:-|nuORF	REV__ENST00000393640.8_1_16:70432458-70432647:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2500488162041	2	399.204276	796.393999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.408	1	94.553	94.053	95.053	0.14493								0	0	0	1.0178	1	39514	39514		2.3027	0	1		+		7566	12814	3666	3686	9344	9344					-0.012342654249096086
GKGRIGVV	8	Unmodified	_GKGRIGVV_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2553588747978	2	393.253237	784.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.575	1	32.869	32.369	33.369	0.29431								0	0	0	1.0178	1	13673	13673		0.69038	0	1				7567	2711	3667	3687	9345	9345					0.09105543171096997
GKGRLFVK	8	Unmodified	_GKGRLFVK_					0	0	0			REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1954833865166	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.977	1	35.977	35.477	36.477	0								0	0	0	1.0178	1	15084	15084		0.40072	0	1		+		7568	9855	3668	3688	9346	9346					0.10978091613571905
GKGRLFVK	8	Unmodified	_GKGRLFVK_					0	0	0			REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1966125369072	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.796	1	49.126	48.626	49.626	0.33034								0	0	0	1.0178	1	20456	20456		0.40072	0	1		+		7569	9855	3668	3688	9347	9347					0.10978091613571905
GKGRLFVK	8	Unmodified	_GKGRLFVK_					0	0	0			REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1965515017509	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.136	1	31.418	30.918	31.918	1.2825								0	0	0	1.0178	1	12646	12646		0.40072	0	1		+		7570	9855	3668	3688	9348	9348					0.10978091613571905
GKGRLFVK	8	Unmodified	_GKGRLFVK_					0	0	0			REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	REV__ENST00000478002.5_1_1:155885750-155895538:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1966735720634	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.989	1	86.148	85.648	86.648	1.159								0	0	0	1.0178	1	35664	35664		0.40072	0	1		+		7571	9855	3668	3688	9349	9349					0.10978091613571905
GKGRRAGP	8	Unmodified	_GKGRRAGP_					0	0	0		ENST00000491771.5_1_2:152135291-152146334:-|nuORF	ENST00000491771.5_1_2:152135291-152146334:-|nuORF	ENST00000491771.5_1_2:152135291-152146334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7386352419853	2	399.738286	797.462019	1.8209	0.0007279	-0.564	-0.00022545	1.2569	0.00050245	399.73811130518754	67.593	0.90329	67.916	67.218	68.121	0.32269					51	29	3	0	0	0	0.88663	1	28301	28301		4.756	0	1	4823200			7572	6914	3669	3689	9350	9350					0.055186042257560075
GKGRRAGP	8	Unmodified	_GKGRRAGP_					0	0	0		ENST00000491771.5_1_2:152135291-152146334:-|nuORF	ENST00000491771.5_1_2:152135291-152146334:-|nuORF	ENST00000491771.5_1_2:152135291-152146334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7389099001884	2	399.738286	797.462019	1.4665	0.00058622	0.13014	5.2023E-05	1.5967	0.00063824	399.73848943590565	66.526	0.88463	67.915	67.299	68.184	1.3888					59	28	3	0	0	0	0.88663	1	27940	27940		4.756	0.42677	1	4450800			7573	6914	3669	3689	9351	9351					0.055186042257560075
GKGRWRRP	8	Unmodified	_GKGRWRRP_					0	0	0		ENST00000372852.3_1_1:40105296-40105449:-|nuORF	ENST00000372852.3_1_1:40105296-40105449:-|nuORF	ENST00000372852.3_1_1:40105296-40105449:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.0809814333916	3	338.201898	1011.58387	-0.35373	-0.00011963	3.7916	0.0012823	3.4379	0.0011627	338.20270269860305	29.365	0.72982	30.647	30.312	31.042	1.2825					37	23	2	0	0	0	2.3239	1	12198	12198		0.40072	0	1	706120			7574	6148	3670	3690	9352	9352					0.07853646308126372
GKGSSVGK	8	Unmodified	_GKGSSVGK_					0	0	0			REV__ENST00000488673.6_1_9:37763841-37777701:+|nuORF	REV__ENST00000488673.6_1_9:37763841-37777701:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2067138552666	2	360.205953	718.397353	2.2196	0.00079952	-2.5094	-0.00090388	-0.28973	-0.00010436	360.204742561043	58.592	0.53065	58.918	58.653	59.184	0.32526					38	17	3	0	0	0	0.8909	3	24511	24511;24562;24626		2.0598	1.3694	1	5739300	+		7575	10774	3671	3691	9353;9354;9355	9353					0.02688984629105562
GKGTARRK	8	Unmodified	_GKGTARRK_					0	0	0		nc|ENSG00000134717|Q96K17-3|BTF3L4;ENST00000524414.5_1_1:52521992-52530613:+|nuORF;ENST00000533836.1_1_1:52522019-52536962:+|nuORF;ENST00000510787.5_1_5:72794492-72798477:+|nuORF;ENSG00000134717|ENST00000313334|BTF3L4;nc|ENSG00000145741|P20290-2|BTF3;ENSG00000145741|ENST00000380591|BTF3	nc|ENSG00000134717|Q96K17-3|BTF3L4	nc|ENSG00000134717|Q96K17-3|BTF3L4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2771484255791	2	437.272493	872.530432	2.8067	0.0012273	1.2619	0.00055178	4.0686	0.0017791	437.2742461133909	80.421	0.73233	81.672	81.388	82.12	1.2512					41	23	3	0	0	0	0.89178	1	33731	33731		0.69038	0	1	1855700			7576	2631	3672	3692	9356	9356					0.08906848805611389
GKGTLAGR	8	Unmodified	_GKGTLAGR_					0	0	0		ENST00000568025.1_1_6:166796808-166797144:+|nuORF	ENST00000568025.1_1_6:166796808-166797144:+|nuORF	ENST00000568025.1_1_6:166796808-166797144:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2289611697197	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.344	1	85.503	85.003	86.003	1.159								0	0	0	1.0178	1	35394	35394		2.0598	0	1				7577	7368	3673	3693	9357	9357					0.05100379757323026
GKGTPLPV	8	Unmodified	_GKGTPLPV_					0	0	0		nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB	nc|ENSG00000183091|P20929-3|NEB	nc|ENSG00000183091|P20929-3|NEB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1537658572197	2	384.734346	767.454139	2.4959	0.00096027	-3.272	-0.0012588	-0.77604	-0.00029857	384.7326588388772	75.491	0.75857	77.273	76.945	77.704	1.7817					37	24	2	0	0	0	2.3239	1	31798	31798		0.69038	0	1	1570000			7578	4640	3674	3694	9358	9358					0.06111032185606291
GKGTTLKL	8	Unmodified	_GKGTTLKL_					0	0	0			REV__ENSG00000198876|ENST00000361264|DCAF12	REV__ENSG00000198876|ENST00000361264|DCAF12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2610351443291	2	409.260728	816.506903	0.72119	0.00029516	-2.1981	-0.0008996	-1.4769	-0.00060444	409.25966088111403	63.843	1.1899	63.843	63.24	64.43	0					87	37	3	0	0	0	0.89178	3	26558	26558;26612;26758		0.69038	0	1	3268700	+		7579	11751	3675	3695	9359;9360;9361	9359					0.09130990248422677
GKGTTLKL	8	Unmodified	_GKGTTLKL_					0	0	0			REV__ENSG00000198876|ENST00000361264|DCAF12	REV__ENSG00000198876|ENST00000361264|DCAF12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.2599365115166	2	409.260728	816.506903	2.5003	0.0010233	-1.2517	-0.00051228	1.2485	0.00051098	409.25963866586676	59.767	0.47921	60.094	59.87	60.349	0.32701					20	15	2	0	0	0	0.89178	1	25058	25058		0.69038	0	1	577070	+		7580	11751	3675	3695	9362	9362					0.09130990248422677
GKGVRGRP	8	Unmodified	_GKGVRGRP_					0	0	0			REV__ENST00000524928.1_1_11:47436156-47436711:+|nuORF	REV__ENST00000524928.1_1_11:47436156-47436711:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7547180056572	2	413.753936	825.493319	1.0627	0.00043971	0.30682	0.00012695	1.3696	0.00056666	413.7544771569785	82.976	0.40123	82.976	82.737	83.138	0					20	12	2	0	0	0	0.89051	1	34536	34536		2.3027	0	1	1835000	+		7581	13652	3676	3696	9363	9363					0.07359177259854732
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2247192263603	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.033	1	84.033	83.533	84.533	0								0	0	0	1.0178	1	35018	35018		2.5775	1.7838	1		+		7582	13269	3677	3697	9364	9364					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2230102419853	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.32	1	84.32	83.82	84.82	0								0	0	0	1.0178	1	35139	35139		2.5775	1.7838	1		+		7583	13269	3677	3697	9365	9365					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2250244021416	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.455	1	84.455	83.955	84.955	0								0	0	0	1.0178	1	35196	35196		2.5775	1.7838	1		+		7584	13269	3677	3697	9366	9366					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2240478396416	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.222	1	84.483	83.983	84.983	0.26083								0	0	0	1.0178	1	35226	35226		2.5775	1.7838	1		+		7585	13269	3677	3697	9367	9367					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2245056033134	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.118	1	89.342	88.842	89.842	0.22359								0	0	0	1.0178	1	37356	37356		2.5775	1.7838	1		+		7586	13269	3677	3697	9368	9368					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2249938845634	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.458	1	89.682	89.182	90.182	0.22359								0	0	0	1.0178	1	37494	37494		2.5775	1.7838	1		+		7587	13269	3677	3697	9369	9369					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2238036990166	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.729	1	85.887	85.387	86.387	1.159								0	0	0	1.0178	1	35552	35552		2.5775	1.7838	1		+		7588	13269	3677	3697	9370	9370					0.019098615257917118
GKGVTPWA	8	Unmodified	_GKGVTPWA_					0	0	0			REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	REV__ENST00000491221.1_1_19:19762333-19764718:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2236205935478	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.99	1	77.757	77.257	78.257	1.7672								0	0	0	1.0178	1	31882	31882		2.5775	0.51773	1		+		7589	13269	3677	3697	9371	9371					0.019098615257917118
GKGVVIPA	8	Unmodified	_GKGVVIPA_					0	0	0		tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1017639040947	2	370.736889	739.459225	-0.38267	-0.00014187	-2.125	-0.00078783	-2.5077	-0.0009297	370.73617738786766	63.817	1.7041	63.817	63.492	65.197	0					127	53	5	0	0	0	2.3239	1	26477	26477		0	0	1	286640000			7590	16911	3678	3698	9372	9372					0.07907336048219804
GKGVVIPA	8	Unmodified	_GKGVVIPA_					0	0	0		tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1019164919853	2	370.736889	739.459225	1.7446	0.0006468	-0.89619	-0.00033225	0.84843	0.00031455	370.7359009413836	64.35	0.92362	64.679	64.401	65.325	0.32899					41	28	2	0	0	0	2.3239	1	26930	26930		0.69038	0	1	585760			7591	16911	3678	3698	9373	9373					0.07907336048219804
GKGVVIPA	8	Unmodified	_GKGVVIPA_					0	0	0		tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1017639040947	2	370.736889	739.459225	1.7472	0.00064777	-2.8248	-0.0010473	-1.0775	-0.00039949	370.73370417082054	64.556	0.1288	66.484	66.422	66.551	1.928					5	3	2	0	0	0	2.3239	1	27064	27064		0.69038	0	1	77955			7592	16911	3678	3698	9374	9374					0.07907336048219804
GKGVVPVP	8	Unmodified	_GKGVVPVP_					0	0	0			REV__ENSG00000100599|ENST00000216487|RIN3	REV__ENSG00000100599|ENST00000216487|RIN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	376.7377197146416	2	376.736889	751.459225	0.32555	0.00012265	2.5549	0.00096254	2.8805	0.0010852	376.7384245643451	88.183	0.48672	88.183	87.847	88.334	0					21	15	2	0	0	0	0.89178	1	36851	36851		0.69038	0	1	425790			7593	8999	3679	3699	9375	9375					0.0735533604823786
GKGVVPVP	8	Unmodified	_GKGVVPVP_					0	0	0			REV__ENSG00000100599|ENST00000216487|RIN3	REV__ENSG00000100599|ENST00000216487|RIN3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	377.1491577029228	2	376.736889	751.459225	0.32555	0.00012265	2.5549	0.00096254	2.8805	0.0010852	376.7384245643451	88.183	0.48672	88.183	87.847	88.334	0					21	15	2	0	0	0	2.3239	1	36775	36775		0.69038	0	1	425790			7594	8999	3679	3699	9376	9376					0.0735533604823786
GKGWPRLL	8	Unmodified	_GKGWPRLL_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	3	309.523867	925.549771	-0.14219	-4.401E-05	2.0227	0.00062606	1.8805	0.00058205	309.524466835034	23.109	0.33987	24.76	24.56	24.9	1.6511					34	10	4	0	0	0	0.89152	1	9652	9652		1.6526	0	1	7890300	+		7595	14200	3680	3700	9377	9377					0.08401805096514181
GKGWPRLL	8	Unmodified	_GKGWPRLL_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	309.523867	925.549771	-0.14219	-4.401E-05	2.0227	0.00062606	1.8805	0.00058205	309.524466835034	23.109	0.33987	24.76	24.56	24.9	1.6511	-0.036972	-6.5468E-05	NaN	1.6526	34	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7890300	+		7596	14200	3680	3700							0.08401805096514181
GKKGARTR	8	Unmodified	_GKKGARTR_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2763244509697	2	437.272493	872.530432	2.4741	0.0010819	-0.51027	-0.00022313	1.9639	0.00085874	437.2730638632055	81.321	0.7651	81.611	81.089	81.854	0.29056					47	24	3	0	0	0	0.89051	1	33986	33986		2.3027	0	1	4805800			7597	2513	3681	3701	9378	9378					0.0890684880560002
GKKGVMKF	8	Unmodified	_GKKGVMKF_					0	0	0		tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	447.7665893435478	2	447.765123	893.515694	1.5958	0.00071455	-0.3635	-0.00016276	1.2323	0.00055179	447.76477768325645	73.498	0.5818	73.498	73.153	73.734	0					44	18	3	0	0	0	0.89008	1	30665	30665		2.5775	0	1	12503000			7598	17173	3682	3702	9379	9379					0.06467640613243475
GKKGVMKF	8	Unmodified	_GKKGVMKF_					0	0	0		tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	tr|A0A7D6ZWM6|A0A7D6ZWM6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_18540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	447.7664672732353	2	447.765123	893.515694	2.8047	0.0012558	-0.086711	-3.8826E-05	2.718	0.001217	447.7650438141742	71.969	0.80282	73.793	73.253	74.056	1.8239					60	25	4	0	0	0	0.89008	1	30156	30156		2.5775	1.7838	1	12041000			7599	17173	3682	3702	9380	9380					0.06467640613243475
GKKKKKKKKA	10	Unmodified	_GKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.108	1	37.384	36.884	37.884	1.2762								0	0	0	0.66255	1	15158	15158		0.13989	0.13989	1		+		7600	12904	3683	3703	9381	9381					0.25026506998392506
GKKKKKKKKA	10	Unmodified	_GKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.203	1	37.479	36.979	37.979	1.2762								0	0	0	0.66255	1	15198	15198		0.13989	0.13989	1		+		7601	12904	3683	3703	9382	9382					0.25026506998392506
GKKKKKKKKA	10	Unmodified	_GKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2837707400322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.296	1	37.573	37.073	38.073	1.2762								0	0	0	0.66255	1	15237	15237		0.13989	0.13989	1		+		7602	12904	3683	3703	9383	9383					0.25026506998392506
GKKKLLHC	8	Unmodified	_GKKKLLHC_					0	0	0			REV__ENSG00000181826|ENST00000454158|RELL1	REV__ENSG00000181826|ENST00000454158|RELL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	309.5242492556572	3	309.52499	925.553142	0.12763	3.9506E-05	-1.4715	-0.00045548	-1.3439	-0.00041597	309.5245021808524	24.198	0.43472	25.439	25.206	25.641	1.241					42	13	4	0	0	0	0.89124	1	10109	10109		1.8442	0	1	16860000	+		7603	11333	3684	3704	9384	9384					0.08738731878861472
GKKKLLHC	8	Unmodified	_GKKKLLHC_					0	0	0			REV__ENSG00000181826|ENST00000454158|RELL1	REV__ENSG00000181826|ENST00000454158|RELL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	309.52499	925.553142	0.12763	3.9506E-05	-1.4715	-0.00045548	-1.3439	-0.00041597	309.5245021808524	24.198	0.43472	25.439	25.206	25.641	1.241	-0.068383	0.0004914	NaN	1.8442	42	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16860000	+		7604	11333	3684	3704							0.08738731878861472
GKKKRKIKKGP	11	Unmodified	_GKKKRKIKKGP_					0	0	0			REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4376708865166	2	634.437881	1266.86121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.499	1	93.499	92.999	93.999	0								0	0	0	0.63775	1	39077	39077		1.4819	0.51963	1		+		7605	8778	3685	3705	9385	9385					0.23845294401394312
GKKLKLGP	8	Unmodified	_GKKLKLGP_					0	0	0		ENSG00000092345|ENST00000399444|DAZL;nc|ENSG00000092345|Q92904-2|DAZL;nc|ENSG00000205944|Q13117-2|DAZ2;nc|ENSG00000205916|Q86SG3-2|DAZ4;ENSG00000187191|ENST00000382365|DAZ3;nc|ENSG00000187191|Q9NR90|DAZ3;nc|ENSG00000205944|Q13117-3|DAZ2;nc|ENSG00000205944|Q13117|DAZ2;nc|ENSG00000205916|Q86SG3|DAZ4;nc|ENSG00000188120|Q9NQZ3-2|DAZ1;ENSG00000205944|ENST00000382440|DAZ2;ENSG00000205916|ENST00000682740|DAZ4;ENSG00000188120|ENST00000405239|DAZ1	ENSG00000092345|ENST00000399444|DAZL	ENSG00000092345|ENST00000399444|DAZL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5680419802666	1	840.566549	839.559273	3.0348	0.0025509	-0.94619	-0.00079534	2.0886	0.0017556	840.5655805576565	106.16	0.70501	106.32	106.2	106.91	0.16174					68	35	5	0	0	0	0.89176	1	45303	45303		0.79363	0	1	591290000			7606	1164	3686	3706	9386	9386					0.133075733820192
GKKNGKLR	8	Unmodified	_GKKNGKLR_					0	0	0			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.7915222048759	2	450.790518	899.566484	1.94	0.00087454	-0.24184	-0.00010902	1.6982	0.00076552	450.7902453307042	92.428	0.36282	92.428	92.197	92.559	0					16	11	2	0	0	0	0.89178	1	38609	38609		0.69038	0	1	539150	+		7607	11095	3687	3707	9387	9387					0.11268305982446236
GKKNGKLR	8	Unmodified	_GKKNGKLR_					0	0	0			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	450.790518	899.566484	1.94	0.00087454	-0.24184	-0.00010902	1.6982	0.00076552	450.7902453307042	92.428	0.36282	92.428	92.197	92.559	0	-0.02215	-0.00024019	NaN	0.69038	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	539150	+		7608	11095	3687	3707							0.11268305982446236
GKKNGKLR	8	Unmodified	_GKKNGKLR_					0	0	0			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	450.790518	899.566484	3.2081	0.0014462	-0.56581	-0.00025506	2.6423	0.0011911	450.78994779897806	92.291	0.3501	92.459	92.184	92.534	0.16835	0.0091439	-0.00053227	NaN	0.69038	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	537870	+		7609	11095	3687	3707							0.11268305982446236
GKKNGKLR	8	Unmodified	_GKKNGKLR_					0	0	0			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	450.790518	899.566484	4.3558	0.0019635	0.19136	8.6263E-05	4.5471	0.0020498	450.79002900572544	91.492	0.31519	92.459	92.275	92.591	0.967	0.0092629	0.00015038	NaN	0.69038	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415650	+		7610	11095	3687	3707							0.11268305982446236
GKKNGKLR	8	Unmodified	_GKKNGKLR_					0	0	0			REV__ENSG00000173376|ENST00000379692|NDNF	REV__ENSG00000173376|ENST00000379692|NDNF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	450.790518	899.566484	3.6703	0.0016545	0.85965	0.00038752	4.5299	0.0020421	450.7904527796575	91.088	0.34695	92.454	92.28	92.627	1.366	0.0037428	0.0007529	NaN	0.69038	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426300	+		7611	11095	3687	3707							0.11268305982446236
GKKQIKKKK	9	Unmodified	_GKKQIKKKK_					0	0	0			REV__ENST00000587928.5_1_19:10781281-10792148:+|nuORF	REV__ENST00000587928.5_1_19:10781281-10792148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1085.752612292767	1	1085.75172	1084.74445	1.314	0.0014266	0.91422	0.00099262	2.2282	0.0024192	1085.7524665821425	107.24	0.71374	107.24	107.02	107.74	0					78	35	3	0	0	0	0.85019	1	45895	45895		0.52476	0.12405	1	22669000	+		7612	14039	3688	3708	9388	9388					0.20546556181648157
GKKRAADS	8	Unmodified	_GKKRAADS_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	832.4659301638603	1	832.463541	831.456264	2.7741	0.0023093	0.58967	0.00049088	3.3638	0.0028002	832.4642121353882	108.28	0.17934	108.33	108.26	108.44	0.050644					19	8	3	0	0	0	0.89008	1	46526	46526		2.5775	1.8871	1	30328000			7613	4960	3689	3709	9389	9389					0.03379460923406441
GKKRAADS	8	Unmodified	_GKKRAADS_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	832.463541	831.456264	1.2355	0.0010285	2.6635	0.0022173	3.899	0.0032457	832.4659581775816	108.3	0.15721	108.3	108.26	108.42	0	-0.054905	0.0016738	NaN	2.5775	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7224100			7614	4960	3689	3709							0.03379460923406441
GKKRAADS	8	Unmodified	_GKKRAADS_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	832.463541	831.456264	2.8754	0.0023936	-1.1585	-0.00096444	1.7168	0.0014292	832.4619539553448	108.28	0.057228	108.43	108.4	108.46	0.15781	0.079914	-0.0015079	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5333600			7615	4960	3689	3709							0.03379460923406441
GKLHKAVKKL	10	Unmodified	_GKLHKAVKKL_					0	0	0		ENSG00000164010|ENST00000372517|ERMAP	ENSG00000164010|ENST00000372517|ERMAP	ENSG00000164010|ENST00000372517|ERMAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3796264529228	2	561.3795	1120.74445	3.2012	0.0017971	-2.7564	-0.0015474	0.44476	0.00024968	561.3778075039644	106.03	0.45152	106.19	106	106.45	0.15781					42	23	4	0	0	0	0.89803	1	45267	45267		1.6526	0	1	595540000			7616	3741	3690	3710	9390	9390					0.1889055618164548
GKLIFFKIL	9	Unmodified	_GKLIFFKIL_					0	0	0		tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2401306033134	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101	1	101	100.5	101.5	0								0	0	0	0.42693	1	42283	42283		0.23584	0.23584	1				7617	16961	3691	3711	9391	9391					0.15929848172845595
GKPFCKKEKL	10	Unmodified	_GKPFCKKEKL_					0	0	0			REV__ENSG00000135423|ENST00000311966|GLS2	REV__ENSG00000135423|ENST00000311966|GLS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3431274294853	2	589.341726	1176.6689	2.0327	0.0011979	0.87386	0.000515	2.9065	0.0017129	589.3421321319817	74.901	2.0207	74.901	74.206	76.226	0					125	63	3	0	0	0	0.89803	1	31134	31134		0.40072	0	1	2129700	+		7618	9940	3692	3712	9392	9392					0.08763210939059718
GKPFCKKEKL	10	Unmodified	_GKPFCKKEKL_					0	0	0			REV__ENSG00000135423|ENST00000311966|GLS2	REV__ENSG00000135423|ENST00000311966|GLS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3444091677666	2	589.341726	1176.6689	1.6397	0.00096635	2.5885	0.0015255	4.2282	0.0024919	589.3432936317366	78.417	0.74825	78.726	78.388	79.136	0.30932					56	23	3	0	0	0	0.89803	2	32677	32677;32884		0.40072	0	1	1708800	+		7619	9940	3692	3712	9393;9394	9393					0.08763210939059718
GKPFCKKEKL	10	Unmodified	_GKPFCKKEKL_					0	0	0			REV__ENSG00000135423|ENST00000311966|GLS2	REV__ENSG00000135423|ENST00000311966|GLS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3444091677666	2	589.341726	1176.6689	2.6941	0.0015878	2.2489	0.0013254	4.943	0.0029131	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.89588	1	31997	31997		0.40072	0	1	8587800	+		7620	9940	3692	3712	9395	9395					0.08763210939059718
GKPFLTLIF	9	Unmodified	_GKPFLTLIF_					0	0	0		tr|A0A553SFW0|A0A553SFW0_NIACI3'-5'exoribonucleaseYhaMOS=NialliacirculansOX=1397GN=yhaMPE=4SV=1	tr|A0A553SFW0|A0A553SFW0_NIACI3'-5'exoribonucleaseYhaMOS=NialliacirculansOX=1397GN=yhaMPE=4SV=1	tr|A0A553SFW0|A0A553SFW0_NIACI3'-5'exoribonucleaseYhaMOS=NialliacirculansOX=1397GN=yhaMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3189575076103	2	518.315503	1034.61645	4.0147	0.0020809	2.6017	0.0013485	6.6164	0.0034294	518.3173692218285	81.902	0.37341	83.115	82.975	83.349	1.2125					29	11	3	0	0	0	0.76456	1	34388	34388		4.756	0.42677	1	3669200			7621	16080	3693	3713	9396	9396					0.10052995867727077
GKPITKLPP	9	Unmodified	_GKPITKLPP_					0	0	0			REV__ENST00000527401.5_1_11:45957138-45987102:-|nuORF	REV__ENST00000527401.5_1_11:45957138-45987102:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.8068725466728	2	475.805303	949.596052	3.2827	0.0015619	-2.5253	-0.0012016	0.75741	0.00036038	475.80414037016857	107.71	0.1439	107.87	107.77	107.92	0.15781					20	7	4	0	0	0	0.84195	1	46374	46374		1.6526	0.17072	1	136170000	+		7622	9935	3694	3714	9397	9397					0.11923825207929895
GKPKRRYFL	9	Unmodified	_GKPKRRYFL_					0	0	0			REV__nc|ENSG00000196678|A8K979-2|ERI2	REV__nc|ENSG00000196678|A8K979-2|ERI2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8527709841728	2	582.85365	1163.69275	1.5351	0.00089472	-1.9328	-0.0011265	-0.39774	-0.00023182	582.8521601625032	96.981	0.18724	96.981	96.862	97.049	0					12	5	3	0	0	0	0.85019	1	40534	40534		0.52476	0.066424	1	2410300	+		7623	11645	3695	3715	9398	9398					0.11744812487722811
GKPKRRYFL	9	Unmodified	_GKPKRRYFL_					0	0	0			REV__nc|ENSG00000196678|A8K979-2|ERI2	REV__nc|ENSG00000196678|A8K979-2|ERI2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	582.85365	1163.69275	3.1883	0.0018583	-3.6468	-0.0021256	-0.45849	-0.00026723	582.8513456153555	96.497	0.15678	96.804	96.694	96.851	0.3062	-0.13195	-0.0018181	NaN	0.52476	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1367800	+		7624	11645	3695	3715							0.11744812487722811
GKPKTTTT	8	Unmodified	_GKPKTTTT_					0	0	0		ENST00000352536.7_1_6:117593658-117593937:+|nuORF	ENST00000352536.7_1_6:117593658-117593937:+|nuORF	ENST00000352536.7_1_6:117593658-117593937:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2386657595634	2	417.239993	832.465432	0.55022	0.00022957	-3.0648	-0.0012788	-2.5146	-0.0010492	417.23838305195636	70.461	0.8559	70.461	70.179	71.035	0					56	27	3	0	0	0	0.8909	1	29338	29338		2.0598	1.2661	1	21308000			7625	5972	3696	3716	9399	9399					0.04249809489078871
GKPLKGPLP	9	Unmodified	_GKPLKGPLP_					0	0	0			REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7924377322197	2	453.792195	905.569838	3.3618	0.0015255	-3.8508	-0.0017474	-0.48899	-0.0002219	453.79093679799337	106.15	0.14511	106.31	106.25	106.39	0.15781					18	7	3	0	0	0	0.83213	1	45400	45400		2.0598	1.2661	1	55335000	+		7626	9332	3697	3717	9400	9400					0.11327556036474107
GKPLKGPLP	9	Unmodified	_GKPLKGPLP_					0	0	0			REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	453.792195	905.569838	3.3287	0.0015105	-4.0873	-0.0018548	-0.7586	-0.00034425	453.791714157592	106.18	0.10023	106.24	106.19	106.29	0.05455	-0.044731	0.0001994	NaN	2.0598	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15690000	+		7627	9332	3697	3717							0.11327556036474107
GKPLKGPLP	9	Unmodified	_GKPLKGPLP_					0	0	0			REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	453.792195	905.569838	3.3618	0.0015255	-3.8508	-0.0017474	-0.48899	-0.0002219	453.79093679799337	106.15	0.14511	106.31	106.25	106.39	0.15781	0.026921	0.00041402	NaN	2.0598	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55335000	+		7628	9332	3697	3717							0.11327556036474107
GKPLKGPLP	9	Unmodified	_GKPLKGPLP_					0	0	0			REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	453.792195	905.569838	3.4525	0.0015667	-4.8826	-0.0022157	-1.4302	-0.000649	453.79051205893467	106.14	0.14248	106.3	106.22	106.36	0.16174	0.01781	-0.00052248	NaN	2.0598	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71012000	+		7629	9332	3697	3717							0.11327556036474107
GKPLQARRR	9	Unmodified	_GKPLQARRR_					0	0	0		ENST00000560255.2_1_15:80216218-80216353:+|nuORF	ENST00000560255.2_1_15:80216218-80216353:+|nuORF	ENST00000560255.2_1_15:80216218-80216353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3397704958916	2	541.338698	1080.66284	1.7852	0.00096641	-0.79659	-0.00043123	0.98864	0.00053519	541.3381543684688	80.993	1.0405	80.993	80.572	81.613	0					56	33	3	0	0	0	0.85019	1	33709	33709		0.52476	0.066424	1	2232100			7630	7328	3698	3718	9401	9401					0.12573873542419278
GKPLQARRR	9	Unmodified	_GKPLQARRR_					0	0	0		ENST00000560255.2_1_15:80216218-80216353:+|nuORF	ENST00000560255.2_1_15:80216218-80216353:+|nuORF	ENST00000560255.2_1_15:80216218-80216353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3400756716728	2	541.338698	1080.66284	2.0005	0.0010829	-0.54372	-0.00029433	1.4568	0.0007886	541.33828660629	80.926	1.1083	81.217	80.655	81.763	0.29056					79	35	3	0	0	0	0.85019	3	33701	33701;33755;34000		0.52476	0.12405	1	2735700			7631	7328	3698	3718	9402;9403;9404	9402					0.12573873542419278
GKPPTLRALHP	11	Unmodified	_GKPPTLRALHP_					0	0	0			REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	594.1610595583916	2	593.85639	1185.69823	1.5034	0.00089281	2.1616	0.0012837	3.665	0.0021765	593.8578030656372	107.52	0.1163	107.52	107.45	107.57	0					13	5	3	0	0	0	0.14606	1	46075	46075		1.0715	1.0715	1	8460500	+		7632	14050	3699	3719	9405	9405					0.11280491279558191
GKPPTLRALHP	11	Unmodified	_GKPPTLRALHP_					0	0	0			REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	593.85639	1185.69823	2.6432	0.0015697	1.3068	0.00077608	3.95	0.0023458	593.856727158328	107.5	0.11926	107.55	107.48	107.6	0.052452	-0.022792	0.0010014	NaN	1.0715	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9915900	+		7633	14050	3699	3719							0.11280491279558191
GKPPTLRALHP	11	Unmodified	_GKPPTLRALHP_					0	0	0			REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	593.85639	1185.69823	3.1965	0.0018983	-0.70199	-0.00041688	2.4945	0.0014814	593.8558629365277	107.48	0.15547	107.64	107.54	107.7	0.15781	0.060149	-0.0013845	NaN	1.0715	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18935000	+		7634	14050	3699	3719							0.11280491279558191
GKPPTLRALHP	11	Unmodified	_GKPPTLRALHP_					0	0	0			REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	REV__ENST00000589123.5_2_19:3462863-3463967:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	593.85639	1185.69823	3.304	0.0019621	-0.38	-0.00022566	2.924	0.0017364	593.855953604088	107.43	0.13706	107.59	107.52	107.66	0.15795	0.017383	-0.0010021	NaN	1.0715	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11593000	+		7635	14050	3699	3719							0.11280491279558191
GKPQNPRV	8	Unmodified	_GKPQNPRV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2589904665947	2	448.259051	894.503549	1.5305	0.00068607	-0.0034734	-1.557E-06	1.527	0.00068451	448.25886577583697	72.097	0.66389	72.097	71.7	72.364	0					48	20	4	0	0	0	0.89051	1	30000	30000		2.3027	0.24298	1	8164100			7636	3425;7900	3700	3720	9406	9406					0.05207740194418875
GKPQNPRV	8	Unmodified	_GKPQNPRV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2599670290947	2	448.259051	894.503549	2.2974	0.0010298	-0.24129	-0.00010816	2.0561	0.00092167	448.2587884397399	71.888	0.89194	72.213	71.656	72.547	0.32494					49	27	3	0	0	0	0.89051	1	30124	30124		2.3027	0.24298	1	8878300			7637	3425;7900	3700	3720	9407	9407					0.05207740194418875
GKPQNPRV	8	Unmodified	_GKPQNPRV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2597534060478	2	448.259051	894.503549	2.9751	0.0013336	-0.66554	-0.00029834	2.3096	0.0010353	448.2588239438045	71.055	0.49245	72.397	71.99	72.482	1.3415					35	15	3	0	0	0	0.89051	1	29799	29799		2.3027	0.4585	1	6184900			7638	3425;7900	3700	3720	9408	9408					0.05207740194418875
GKPQNPRV	8	Unmodified	_GKPQNPRV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2606689333916	2	448.259051	894.503549	1.4021	0.00062849	0.24223	0.00010858	1.6443	0.00073707	448.25909628097116	70.617	0.66951	72.455	72.073	72.742	1.8378					39	21	3	0	0	0	0.89051	2	29593	29593;29644		2.3027	0.4585	1	3333900			7639	3425;7900	3700	3720	9409;9410	9409					0.05207740194418875
GKPRKGHPTIT	11	Unmodified	_GKPRKGHPTIT_					0	0	0		ENST00000371817.7_1_9:137734384-137734717:+|nuORF	ENST00000371817.7_1_9:137734384-137734717:+|nuORF	ENST00000371817.7_1_9:137734384-137734717:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.3523437380791	2	596.351471	1190.68839	1.7619	0.0010507	0.78942	0.00047077	2.5513	0.0015215	596.3518578204387	97.614	0.12242	97.614	97.537	97.66	0					9	3	3	0	0	0	1.0366	1	40818	40818		1.1933	0.66858	1	2051300			7640	6129	3701	3721	9411	9411					0.10067303274172446
GKPRKHRKDR	10	Unmodified	_GKPRKHRKDR_					0	0	0		nc|ENSG00000157741|Q6ZU65-2|UBN2;ENSG00000157741|ENST00000473989|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.5938903689384	3	426.593566	1276.75887	2.002	0.00085405	-1.83	-0.00078068	0.17197	7.3363E-05	426.5925712615957	40.079	0.53226	40.391	40.227	40.759	0.31263					30	16	3	0	0	0	0.8872	1	16847	16847		2.8433	1.6285	1	1606900			7641	3479	3702	3722	9412	9412					0.13156021382496874
GKPRKWRVAPG	11	Unmodified	_GKPRKWRVAPG_					0	0	0			REV__ENSG00000149260|ENST00000648180|CAPN5	REV__ENSG00000149260|ENST00000648180|CAPN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9210998415947	3	417.919279	1250.73601	0.76201	0.00031846	2.7067	0.0011312	3.4687	0.0014497	417.9206287305811	29.391	0.33407	31.19	31.082	31.416	1.7987					24	10	3	0	0	0	1.0174	1	12377	12377		1.1098	0.48293	1	2975000	+		7642	10366	3703	3723	9413	9413					0.12067002265030169
GKPRLKIYL	9	Unmodified	_GKPRLKIYL_					0	0	0		ENST00000419462.1_1_8:102381113-102381542:+|nuORF	ENST00000419462.1_1_8:102381113-102381542:+|nuORF	ENST00000419462.1_1_8:102381113-102381542:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3557006716728	2	544.352951	1086.69135	2.7549	0.0014997	-1.4334	-0.00078028	1.3215	0.00071937	544.35213255309	106.04	0.18752	106.1	106	106.19	0.054558					25	8	5	0	0	0	0.85019	1	45079	45079		0.52476	0	1	203900000			7643	6436	3704	3724	9414	9414					0.15147178398956385
GKPRLLRRVAA	11	Unmodified	_GKPRLLRRVAA_					0	0	0			REV__ENSG00000278889|ENST00000341959|OR2S2	REV__ENSG00000278889|ENST00000341959|OR2S2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.9050170779228	2	618.904205	1235.79386	2.8744	0.001779	0.42871	0.00026533	3.3031	0.0020443	618.9044088530143	107.38	0.22867	107.53	107.41	107.64	0.15781					41	11	5	0	0	0	1.0395	1	46218	46218		0.30703	0	1	427610000	+		7644	12026	3705	3725	9415	9415					0.18539264190462745
GKPRRPSIDVP	11	Unmodified	_GKPRRPSIDVP_					0	0	0			REV__ENSG00000214814|ENST00000522917|FER1L6	REV__ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3567382693291	2	611.356754	1220.69895	1.6593	0.0010144	-0.21707	-0.00013271	1.4423	0.00088174	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	1.0366	1	33685	33685		1.1933	0	1	10904000	+		7645	11860	3706	3726	9416	9416					0.09743285928584555
GKPTGRAR	8	Unmodified	_GKPTGRAR_					0	0	0			REV__ENST00000585386.1_1_19:46145287-46148597:-|nuORF	REV__ENST00000585386.1_1_19:46145287-46148597:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7515441775322	2	421.751393	841.488233	0.76324	0.0003219	0.010193	4.299E-06	0.77343	0.00032619	421.7513746790956	71.908	0.60112	71.908	71.636	72.237	0					49	18	4	0	0	0	0.89051	2	29919	29919;29996		2.3027	2.3027	1	23435000	+		7646	14021	3707	3727	9417;9418	9417					0.06114873397223164
GKPTGRAR	8	Unmodified	_GKPTGRAR_					0	0	0			REV__ENST00000585386.1_1_19:46145287-46148597:-|nuORF	REV__ENST00000585386.1_1_19:46145287-46148597:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7524597048759	2	421.751393	841.488233	2.9295	0.0012355	0.2926	0.0001234	3.2221	0.0013589	421.7514556497293	70.791	0.55908	72.145	71.873	72.432	1.3536					41	17	4	0	0	0	0.89051	1	29719	29719		2.3027	0.24298	1	9287600	+		7647	14021	3707	3727	9419	9419					0.06114873397223164
GKRAAVHS	8	Unmodified	_GKRAAVHS_					0	0	0		ENST00000366582.7_1_1:236719535-236721710:-|nuORF	ENST00000366582.7_1_1:236719535-236721710:-|nuORF	ENST00000366582.7_1_1:236719535-236721710:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2389099001884	2	413.238119	824.461684	2.355	0.00097317	-0.15076	-6.23E-05	2.2042	0.00091087	413.23785758739774	69.793	0.64928	71.147	70.717	71.366	1.3536					39	20	3	0	0	0	0.8873	1	29319	29319		4.3292	0	1	2018100			7648	6047	3708	3728	9420	9420					0.04243184505889985
GKRAPRAR	8	Unmodified	_GKRAPRAR_					0	0	0			REV__ENST00000531072.1_1_11:64808545-64809015:+|nuORF	REV__ENST00000531072.1_1_11:64808545-64809015:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.1924621462822	3	304.526382	910.557316	-0.29259	-8.9103E-05	-2.8209	-0.00085905	-3.1135	-0.00094816	304.52549615097985	28.809	0.24429	30.091	29.947	30.191	1.2825					15	7	3	0	0	0	2.3239	1	12068	12068		1.4819	0	1	3854300	+		7649	13706	3709	3729	9421	9421					0.09845957416780493
GKSNWKYVISL	11	Unmodified	_GKSNWKYVISL_					0	0	0			REV__LGI2|p.T352I|1|0.06|ENSG00000153012|chr4:25004034-25004034|G/A|missense_variant	REV__LGI2|p.T352I|1|0.06|ENSG00000153012|chr4:25004034-25004034|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	432.9018432497978	3	432.243317	1293.70812	2.1326	0.00092179	3.2858	0.0014203	5.4184	0.0023421	432.24466173676797	41.63	0.527	41.946	41.696	42.223	0.31683					27	16	2	0	0	0	0.14606	1	17465	17465		2.8433	0	1	2262500	+		7650	14351	3710	3730	9422	9422					0.07301634494274367
GKVAGKNG	8	Unmodified	_GKVAGKNG_					0	0	0		nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	nc|ENSG00000047849|P27816-3|MAP4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	365.2112304568291	2	365.713945	729.413337	0.12933	4.7296E-05	-1.6562	-0.00060569	-1.5269	-0.00055839	365.71357817091894	22.943	0.25025	24.157	24.04	24.29	1.2145					12	7	2	0	0	0	2.3239	1	9582	9582		5.2307	0	1	323530			7651	7819	3711	3731	9423	9423					0.037806908659831606
GKVIYVLV	8	Unmodified	_GKVIYVLV_					0	0	0		nc|ENSG00000063127|Q9GZN6-2|SLC6A16;ENSG00000063127|ENST00000335875|SLC6A16	nc|ENSG00000063127|Q9GZN6-2|SLC6A16	nc|ENSG00000063127|Q9GZN6-2|SLC6A16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1210510134697	2	445.789121	889.56369	2.2659	0.0010101	1.0459	0.00046627	3.3118	0.0014764	445.78976954128325	41.828	0.18612	42.149	42.01	42.196	0.32058					9	5	2	0	0	0	2.3239	1	17573	17573		0.69038	0	1	378040			7652	759	3712	3732	9424	9424					0.11449037804936779
GKVKKPPVQIV	11	Unmodified	_GKVKKPPVQIV_					0	0	0			REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1192.778491199017	1	1192.7776	1191.77033	2.6109	0.0031142	-2.1192	-0.0025277	0.49167	0.00058646	1192.774624911229	107.42	0.17166	107.58	107.47	107.64	0.15795					24	8	4	0	0	0	1.0362	1	46141	46141		1.3295	0.87119	1	32523000	+		7653	10212	3713	3733	9425	9425					0.1821140563326935
GKVKKPPVQIV	11	Unmodified	_GKVKKPPVQIV_					0	0	0			REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1192.7776	1191.77033	1.3528	0.0016135	-0.19203	-0.00022905	1.1607	0.0013845	1192.7765639759307	107.48	0.11742	107.48	107.41	107.53	0	-0.056393	0.0026579	NaN	1.3295	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5269400	+		7654	10212	3713	3733							0.1821140563326935
GKVKKPPVQIV	11	Unmodified	_GKVKKPPVQIV_					0	0	0			REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1192.7776	1191.77033	3.9274	0.0046846	-3.6547	-0.0043593	0.2727	0.00032527	1192.7738095669417	107.46	0.14609	107.51	107.39	107.54	0.052452	-0.023698	-0.0014723	NaN	1.3295	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6597300	+		7655	10212	3713	3733							0.1821140563326935
GKVKKPPVQIV	11	Unmodified	_GKVKKPPVQIV_					0	0	0			REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	REV__ENST00000474352.5_1_1:151337855-151338307:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1192.7776	1191.77033	2.6109	0.0031142	-2.1192	-0.0025277	0.49167	0.00058646	1192.774624911229	107.42	0.17166	107.58	107.47	107.64	0.15795	0.044767	0.00035925	NaN	1.3295	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32523000	+		7656	10212	3713	3733							0.1821140563326935
GKVRSLLP	8	Unmodified	_GKVRSLLP_					0	0	0		nc|ENSG00000054179|Q9Y5L3-3|ENTPD2;nc|ENSG00000054179|Q9Y5L3-2|ENTPD2;ENSG00000054179|ENST00000355097|ENTPD2	nc|ENSG00000054179|Q9Y5L3-3|ENTPD2	nc|ENSG00000054179|Q9Y5L3-3|ENTPD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2828857302666	2	435.281995	868.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.147	1	34.425	33.925	34.925	1.2782								0	0	0	1.0178	1	13899	13899		4.3292	1.7518	1				7657	710	3714	3734	9426	9426					0.10990385376669565
GKVVKRLLI	9	Unmodified	_GKVVKRLLI_					0	0	0		tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3684570193291	2	513.363319	1024.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.868	1	99.94	99.44	100.44	0.072716								0	0	0	0.42693	1	41816	41816		0.52476	0	1				7658	16446	3715	3735	9427	9427					0.2007176877866641
GKVVKRLLI	9	Unmodified	_GKVVKRLLI_					0	0	0		tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	tr|A0A553SP26|A0A553SP26_NIACISuccinate--CoAligase[ADP-forming]subunitbetaOS=NialliacirculansOX=1397GN=sucCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3655883669853	2	513.363319	1024.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.02	1	100.09	99.588	100.59	0.072716								0	0	0	0.42693	1	41878	41878		0.52476	0	1				7659	16446	3715	3735	9428	9428					0.2007176877866641
GLAAGGIVAV	10	Unmodified	_GLAAGGIVAV_					0	0	0		nc|ENSG00000186260|Q9ULH7-4|MRTFB;nc|ENSG00000186260|Q9ULH7|MRTFB;ENSG00000186260|ENST00000571589|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	827.5002319216728	1	827.498529	826.491253	2.1615	0.0017886	-0.42618	-0.00035267	1.7353	0.001436	827.4982996035648	50.393	0.33959	51.787	51.615	51.955	1.3938					21	10	3	0	0	0	0.28071	1	21085	21085		40.449	0	1	2495100			7660	4783	3716	3736	9429	9429					0.07106703731369635
GLAAPNLAALV	11	Unmodified	_GLAAPNLAALV_					0	0	0			REV__ENST00000393927.8_1_19:8575473-8576517:-|nuORF	REV__ENST00000393927.8_1_19:8575473-8576517:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.7954284548759	2	505.305667	1008.59678	1.6611	0.00083936	-3.1657	-0.0015997	-1.5046	-0.0007603	505.80454282776947	53.952	0.22985	55.353	55.225	55.455	1.4005					11	7	2	0	0	0	0.14606	1	22611	22611		9.3831	0	1	633550	+		7661	12820	3717	3737	9430	9430					0.09282619856981
GLACGWAISL	10	Unmodified	_GLACGWAISL_					0	0	0		ENST00000435880.6_1_2:70190299-70191494:-|nuORF	ENST00000435880.6_1_2:70190299-70191494:-|nuORF	ENST00000435880.6_1_2:70190299-70191494:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	495.3119689822197	2	495.757495	989.500437	2.3673	0.0011736	0.43443	0.00021537	2.8018	0.001389	495.75809740803146	64.327	0.21732	66.255	66.139	66.356	1.928					9	6	2	0	0	0	0.1245	1	27022	27022		10.824	1.4765	1	341540			7662	6527	3718	3738	9431	9431					0.00526729025386885
GLACGWAISL	10	Unmodified	_GLACGWAISL_					0	0	0		ENST00000435880.6_1_2:70190299-70191494:-|nuORF	ENST00000435880.6_1_2:70190299-70191494:-|nuORF	ENST00000435880.6_1_2:70190299-70191494:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	495.757495	989.500437	3.0915	0.0015327	0.68285	0.00033853	3.7744	0.0018712	495.7572743539058	64.859	0.24532	66.261	66.074	66.319	1.4021	0.0030466	0.00017047	NaN	6.7232	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491980			7663	6527	3718	3738							0.00526729025386885
GLADASLLKKV	11	Unmodified	_GLADASLLKKV_					0	0	0		nc|ENSG00000130638|Q9UBB4-2|ATXN10;ENSG00000130638|ENST00000252934|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	nc|ENSG00000130638|Q9UBB4-2|ATXN10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8466064333916	2	557.845156	1113.67576	1.1668	0.00065089	1.3616	0.00075954	2.5284	0.0014104	557.8460557967608	37.973	0.1922	39.257	39.113	39.305	1.284					10	7	2	0	0	0	0.25639	1	15945	15945		35.612	11.822	1	977430			7664	2445	3719	3739	9432	9432					0.12346847091271229
GLADKVYFL	9	Unmodified	_GLADKVYFL_					0	0	0		CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant;CAD|p.D2198Sfs*15|1|0.29|ENSG00000084774|chr2:27243430-27243448|CGGATCCCCGCGCAGCCTA/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2885009646416	2	513.286943	1024.55933	2.3949	0.0012293	0.58661	0.0003011	2.9815	0.0015304	513.2871967345674	61.126	0.65997	61.126	60.892	61.552	0					61	20	4	0	0	0	0.015029	4	25476	25439;25476;25515;25556		103.35	25.309	1	36811000			7665	114	3720	3740	9433;9434;9435;9436	9434					0.04803528591378381
GLADKVYFL	9	Unmodified	_GLADKVYFL_					0	0	0		CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant;CAD|p.D2198Sfs*15|1|0.29|ENSG00000084774|chr2:27243430-27243448|CGGATCCCCGCGCAGCCTA/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2885619997978	2	513.286943	1024.55933	2.3511	0.0012068	0.86642	0.00044472	3.2175	0.0016515	513.2873462737851	60.481	0.7282	60.809	60.568	61.296	0.32809					60	22	4	0	0	0	0.0069529	3	25344	25307;25344;25423		114.65	18.364	1	33109000			7666	114	3720	3740	9437;9438;9439	9438					0.04803528591378381
GLADKVYFL	9	Unmodified	_GLADKVYFL_					0	0	0		CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant;CAD|p.D2198Sfs*15|1|0.29|ENSG00000084774|chr2:27243430-27243448|CGGATCCCCGCGCAGCCTA/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2884399294853	2	513.286943	1024.55933	2.7666	0.0014201	0.3256	0.00016713	3.0922	0.0015872	513.2871281548722	59.279	0.79425	60.698	60.32	61.115	1.4196					71	22	4	0	0	0	0.015029	4	24818	24775;24818;24856;24935		103.35	14.45	1	72289000			7667	114	3720	3740	9440;9441;9442;9443	9441					0.04803528591378381
GLADKVYFL	9	Unmodified	_GLADKVYFL_					0	0	0		CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant;CAD|p.D2198Sfs*15|1|0.29|ENSG00000084774|chr2:27243430-27243448|CGGATCCCCGCGCAGCCTA/-|frameshift_variant;ENSG00000084774|ENST00000264705|CAD	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	CAD|p.A899Dfs*6|1|0.15|ENSG00000084774|chr2:27232497-27232498|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2886840701103	2	513.286943	1024.55933	2.617	0.0013433	-0.061299	-3.1464E-05	2.5557	0.0013118	513.2869124876555	58.813	0.70518	60.782	60.457	61.162	1.969					70	22	4	0	0	0	0.0069529	4	24724	24598;24646;24685;24724		114.65	25.745	1	63329000			7668	114	3720	3740	9444;9445;9446;9447	9447					0.04803528591378381
GLADNTVIAKV	11	Unmodified	_GLADNTVIAKV_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2187377810478	2	550.819138	1099.62372	1.3889	0.00076504	3.9942	0.0022001	5.3831	0.0029651	550.8217942316594	38.431	0.20497	39.727	39.6	39.805	1.2961					11	6	2	0	0	0	0.14606	1	16157	16157		1.3295	0	1	1430600			7669	1822	3721	3741	9448	9448					0.07789683677492576
GLAEEVQRL	9	Unmodified	_GLAEEVQRL_					0	0	0		ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7848693728447	2	507.782556	1013.55056	1.9138	0.0009718	1.5398	0.00078189	3.4536	0.0017537	507.78384566246524	40.123	0.25689	40.123	40.009	40.266	0					10	7	2	0	0	0	0.25667	1	16822	16822		27.629	4.8925	1	339300			7670	3222	3722	3742	9449	9449					0.04432554954905754
GLAEEVQRL	9	Unmodified	_GLAEEVQRL_					0	0	0		ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	ENSG00000148798|ENST00000369849|INA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	507.782556	1013.55056	1.9156	0.00097272	2.3696	0.0012032	4.2852	0.0021759	507.7834178876107	39.594	0.25294	39.907	39.797	40.05	0.31263	-0.10805	0.00039896	NaN	27.629	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388570			7671	3222	3722	3742							0.04432554954905754
GLAEHLYLA	9	Unmodified	_GLAEHLYLA_					0	0	0		ENST00000487209.5_1_1:43830638-43833598:-|nuORF;ENST00000479686.5_1_1:43830638-43833178:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.7714111208916	2	493.768917	985.523281	1.5767	0.00077854	2.3052	0.0011382	3.8819	0.0019168	493.7696732121586	45.044	0.31612	45.044	44.902	45.219	0					13	9	2	0	0	0	0.34572	1	18857	18857		23.148	7.3012	1	557940			7672	6811	3723	3743	9450	9450					0.0299407141451411
GLAEHLYLA	9	Unmodified	_GLAEHLYLA_					0	0	0		ENST00000487209.5_1_1:43830638-43833598:-|nuORF;ENST00000479686.5_1_1:43830638-43833178:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.2741577029228	2	493.768917	985.523281	2.4333	0.0012015	3.5129	0.0017345	5.9462	0.002936	493.769746899881	44.493	0.26682	44.82	44.66	44.927	0.32674					12	8	2	0	0	0	0.5697	1	18706	18706		12.532	3.1841	1	454520			7673	6811	3723	3743	9451	9451					0.0299407141451411
GLAEHLYLA	9	Unmodified	_GLAEHLYLA_					0	0	0		ENST00000487209.5_1_1:43830638-43833598:-|nuORF;ENST00000479686.5_1_1:43830638-43833178:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	ENST00000487209.5_1_1:43830638-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7708618044853	2	493.768917	985.523281	1.6334	0.00080654	2.8994	0.0014316	4.5328	0.0022382	493.7696845926296	43.038	0.86029	44.378	43.921	44.782	1.3399					33	27	2	0	0	0	0.5697	1	18005	18005		12.532	1.7076	1	1841200			7674	6811	3723	3743	9452	9452					0.0299407141451411
GLAELYVMV	9	Unmodified	_GLAELYVMV_					0	0	0		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	994.5316039919853	1	994.527781	993.520504	1.8776	0.0018673	-0.41848	-0.00041619	1.4591	0.0014512	994.5274848029717	80.476	0.31252	80.476	80.354	80.666	0					20	9	3	0	0	0	0.22519	2	33564	33504;33564		30.225	3.8835	1	923420			7675	5361	3724	3744	9453;9454	9454					0.023484799653488153
GLAELYVMV	9	Unmodified	_GLAELYVMV_					0	0	0		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	994.5339843630791	1	994.527781	993.520504	2.0291	0.002018	-0.67857	-0.00067486	1.3505	0.0013431	994.5280759336226	80.068	0.31526	80.369	80.163	80.478	0.30047					16	9	2	0	0	0	0.24063	1	33458	33458		28.487	3.813	1	848920			7676	5361	3724	3744	9455	9455					0.023484799653488153
GLAELYVMV	9	Unmodified	_GLAELYVMV_					0	0	0		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5325805544853	1	994.527781	993.520504	4.0529	0.0040307	-0.36601	-0.000364	3.6869	0.0036667	994.5272458499006	79.057	0.37462	80.324	80.161	80.536	1.2668					21	11	2	0	0	0	0.061246	2	33221	33168;33221		63.563	9.9873	1	3593100			7677	5361	3724	3744	9456;9457	9457					0.023484799653488153
GLAELYVMV	9	Unmodified	_GLAELYVMV_					0	0	0		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5312377810478	1	994.527781	993.520504	2.7971	0.0027818	0.43653	0.00043414	3.2336	0.0032159	994.5279324856187	78.549	0.43338	80.284	80.165	80.598	1.735					24	13	2	0	0	0	0.061246	2	32984	32937;32984		63.563	19.156	1	3252400			7678	5361	3724	3744	9458;9459	9459					0.023484799653488153
GLAELYVMV	9	Unmodified	_GLAELYVMV_					0	0	0		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7693359255791	2	497.767529	993.520504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.562	1	80.297	79.797	80.797	1.735								0	0	0	0.35192	1	32949	32949		13.508	2.3934	1				7679	5361	3724	3744	9460	9460					0.023484799653488153
GLAELYVMV	9	Oxidation (M)	_GLAELYVM(Oxidation (M))V_		GLAELYVM(1)V		GLAELYVM(54)V	0	0	1		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7657348513603	2	505.764986	1009.51542	1.7273	0.00087361	0.079823	4.0372E-05	1.8071	0.00091398	505.7655465804608	65.82	0.57661	67.728	67.344	67.921	1.9085					28	18	2	0	0	0	0.087207	1	27568	27568		53.576	9.1686	1	1061300			7680	5361	3724	3745	9461	9461		98			0.011041761027399843
GLAELYVMV	9	Oxidation (M)	_GLAELYVM(Oxidation (M))V_					0	0	1		ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	ENSG00000244045|ENST00000292114|TMEM199	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	505.764986	1009.51542	2.2975	0.001162	0.59293	0.00029988	2.8904	0.0014619	505.7658161778443	66.104	0.45232	67.493	67.329	67.782	1.3888	-0.15473	0.00055738	NaN	53.576	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1347700			7681	5361	3724	3745				98			0.011041761027399843
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	877.4781982302666	1	877.477794	876.470518	1.5882	0.0013936	0.034959	3.0676E-05	1.6232	0.0014243	877.4776656664529	68.123	0.31523	68.123	67.98	68.296	0					16	9	2	0	0	0	0.069258	1	28366	28366		60.39	15.983	1	1112200			7682	1333	3725	3746	9462	9462					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	877.4800903201103	1	877.477794	876.470518	1.7432	0.0015296	1.1572	0.0010154	2.9004	0.002545	877.4788424050743	67.675	0.28484	67.997	67.869	68.154	0.32269					15	8	2	0	0	0	0.069258	2	28331	28331;28384		60.39	14.369	1	1185100			7683	1333	3725	3746	9463;9464	9463					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	877.4795410037041	1	877.477794	876.470518	1.8342	0.0016095	0.91653	0.00080423	2.7507	0.0024137	877.4786753966566	66.528	0.36853	67.917	67.689	68.057	1.3888					22	11	3	0	0	0	0.022807	2	27881	27881;27930		97.075	42.301	1	2441100			7684	1333	3725	3746	9465;9466	9465					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2433959841728	2	439.242535	876.470518	2.1457	0.00094248	0.10485	4.6055E-05	2.2506	0.00098854	439.24246106074605	66.469	0.30656	67.858	67.751	68.057	1.3888					21	9	3	0	0	0	0.28226	1	27894	27894		26.341	6.9023	1	1637300			7685	1333	3725	3746	9467	9467					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	877.4789306521416	1	877.477794	876.470518	1.6349	0.0014346	0.78682	0.00069042	2.4217	0.002125	877.4782027887377	66.07	0.34054	67.971	67.759	68.1	1.9008					18	10	2	0	0	0	0.013238	2	27733	27683;27733		104.8	29.87	1	1850100			7686	1333	3725	3746	9468;9469	9469					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2439758181572	2	439.242535	876.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.025	1	67.933	67.433	68.433	1.9085								0	0	0	0.19733	1	27699	27699		26.341	6.9023	1				7687	1333	3725	3746	9470	9470					0.02734113351709766
GLAFSLNGV	9	Unmodified	_GLAFSLNGV_					0	0	0		nc|ENSG00000101294|Q8TCT9|HM13;nc|ENSG00000101294|Q8TCT9-4|HM13;ENSG00000101294|ENST00000398174|HM13;ENST00000464173.5_1_20:30136866-30137929:+|nuORF;ENST00000483310.5_1_20:30136863-30150236:+|nuORF;ENST00000472128.5_1_20:30136905-30155443:+|nuORF;ENST00000492709.5_1_20:30132820-30157019:+|nuORF;ENST00000460389.5_1_20:30136650-30157019:+|nuORF	nc|ENSG00000101294|Q8TCT9|HM13	nc|ENSG00000101294|Q8TCT9|HM13	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	439.242535	876.470518	2.1409	0.00094039	0.10011	4.3974E-05	2.241	0.00098436	439.2425659743447	67.657	0.25423	67.98	67.9	68.154	0.32269	0.060739	-2.7074E-06	NaN	26.341	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485840			7688	1333	3725	3746							0.02734113351709766
GLAGMLTEV	9	Unmodified	_GLAGMLTEV_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	890.4655639529228	1	890.46518	889.457904	2.3406	0.0020842	-0.47918	-0.00042669	1.8614	0.0016575	890.465041524823	63.388	0.33803	64.801	64.626	64.965	1.4134					20	10	3	0	0	0	0.033521	1	26581	26581		81.864	3.4193	1	1255000			7689	4956	3726	3747	9471	9471					0.008753338971700941
GLAGRKPA	8	Unmodified	_GLAGRKPA_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	769.4709960818291	1	769.467898	768.460622	2.7365	0.0021057	1.4332	0.0011028	4.1697	0.0032084	769.4684421578096	108.26	0.15701	108.31	108.24	108.4	0.050644					13	7	2	0	0	0	0.89176	1	46497	46497		0.79363	0	1	64300000			7690	1488	3727	3748	9472	9472					0.06712970136982221
GLAHFVNEI	9	Unmodified	_GLAHFVNEI_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2;ENST00000490152.1_1_13:20641134-20642237:+|nuORF	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2704955935478	2	500.266542	998.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.569	1	45.934	45.434	46.434	1.3653								0	0	0	0.14418	1	18681	18681		30.225	15.643	1				7691	2138	3728	3749	9473	9473					0.01921187271761937
GLAHFVNEI	9	Unmodified	_GLAHFVNEI_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2;ENST00000490152.1_1_13:20641134-20642237:+|nuORF	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2696105837822	2	500.266542	998.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.99	1	45.934	45.434	46.434	1.9438								0	0	0	0.317	1	18443	18443		16.942	4.4107	1				7692	2138	3728	3749	9474	9474					0.01921187271761937
GLAIRVPV	8	Unmodified	_GLAIRVPV_					0	0	0			REV__nc|ENSG00000182670|P53804-3|TTC3	REV__nc|ENSG00000182670|P53804-3|TTC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	824.5417968630791	1	824.535249	823.527973	2.7697	0.0022837	2.5132	0.0020722	5.283	0.004356	824.5371571232979	109.51	0.27331	109.56	109.4	109.68	0.048851					34	10	4	0	0	0	0.88958	1	47296	47296		2.8892	0	1	24768000	+		7693	11359	3729	3750	9475	9475					0.10915000347949899
GLAKLIADV	9	Unmodified	_GLAKLIADV_					0	0	0		ENST00000401028.2_1_1:91793937-91794252:+|nuORF;ENSG00000168496|ENST00000305885|FEN1	ENST00000401028.2_1_1:91793937-91794252:+|nuORF	ENST00000401028.2_1_1:91793937-91794252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2823058962822	2	450.28166	898.548768	0.50967	0.00022949	0.0023517	1.0589E-06	0.51202	0.00023055	450.28156807045167	50.664	0.30478	52.64	52.546	52.851	1.9753					16	9	2	0	0	0	0.053939	1	21230	21230		66.457	3.884	1	2480700			7694	4037	3730	3751	9476	9476					0.09543545936935516
GLAKLIADV	9	Unmodified	_GLAKLIADV_					0	0	0		ENST00000401028.2_1_1:91793937-91794252:+|nuORF;ENSG00000168496|ENST00000305885|FEN1	ENST00000401028.2_1_1:91793937-91794252:+|nuORF	ENST00000401028.2_1_1:91793937-91794252:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	450.28166	898.548768	0.88501	0.00039851	0.23069	0.00010387	1.1157	0.00050238	450.281673480242	51.33	0.36934	52.724	52.498	52.868	1.3938	0.042067	6.8056E-05	NaN	66.457	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2493700			7695	4037	3730	3751							0.09543545936935516
GLALGAIAVV	10	Unmodified	_GLALGAIAVV_					0	0	0		nc|ENSG00000146373|Q8TC41-2|RNF217;ENSG00000146373|ENST00000521654|RNF217	nc|ENSG00000146373|Q8TC41-2|RNF217	nc|ENSG00000146373|Q8TC41-2|RNF217	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	883.5636474490166	1	883.56113	882.553853	2.9863	0.0026386	0.55963	0.00049447	3.5459	0.003133	883.561931692883	72.627	0.49326	73.957	73.702	74.195	1.3297					37	15	3	0	0	0	0.19438	1	30474	30474		49.669	0	1	16460000			7696	7890	3731	3752	9477	9477					0.10787849799567084
GLAMFLVKL	9	Unmodified	_GLAMFLVKL_					0	0	0		tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3030883669853	2	496.304081	990.59361	2.7493	0.0013645	-2.2816	-0.0011324	0.46768	0.00023211	496.3029158225935	64.018	0.55764	65.946	65.613	66.17	1.928					27	17	2	0	0	0	0.75267	1	26930	26930		5.2307	0.90143	1	845920			7697	16435	3732	3753	9478	9478					0.09793653478641318
GLAMFLVKL	9	Unmodified	_GLAMFLVKL_					0	0	0		tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	496.304081	990.59361	3.0319	0.0015047	-2.3222	-0.0011525	0.70967	0.00035221	496.3030917742722	64.572	1.0195	65.979	65.305	66.324	1.4071	0.016731	-1.9672E-05	NaN	5.2307	43	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029700			7698	16435	3732	3753							0.09793653478641318
GLAMVPKIE	9	Unmodified	_GLAMVPKIE_					0	0	0			REV__nc|ENSG00000205560|Q92523-2|CPT1B	REV__nc|ENSG00000205560|Q92523-2|CPT1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2791931033134	2	479.275521	956.536489	2.2122	0.0010603	2.6073	0.0012496	4.8196	0.0023099	479.27669627777755	64.483	1.0819	64.483	63.832	64.914	0					60	33	2	0	0	0	0.77526	1	26862	26862		4.3292	0	1	1074600	+		7699	11817	3733	3754	9479	9479					0.05648186202245142
GLAPIHALLG	10	Unmodified	_GLAPIHALLG_					0	0	0			REV__sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	REV__sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2969238162041	2	481.295102	960.575651	2.4196	0.0011646	0.15239	7.3345E-05	2.572	0.0012379	481.295125463509	61.89	0.15685	61.89	61.804	61.96	0					6	4	2	0	0	0	0.56346	1	25821	25821		24.674	1.5255	1	479580	+		7700	14649	3734	3755	9480	9480					0.09378654548129362
GLAPIHALLG	10	Unmodified	_GLAPIHALLG_					0	0	0			REV__sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	REV__sp|Q6SVZ0|US16_HCMVMProteinUS16OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US16PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	481.295102	960.575651	2.4196	0.0011646	0.15239	7.3345E-05	2.572	0.0012379	481.295125463509	61.89	0.15685	61.89	61.804	61.96	0	0	0	NaN	24.674	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479580	+		7701	14649	3734	3755							0.09378654548129362
GLAPLHIQL	9	Unmodified	_GLAPLHIQL_					0	0	0		ENSG00000126903|ENST00000651600|SLC10A3	ENSG00000126903|ENST00000651600|SLC10A3	ENSG00000126903|ENST00000651600|SLC10A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2943603396416	2	481.295102	960.575651	2.6022	0.0012524	-2.0033	-0.00096418	0.59885	0.00028822	481.29413725086954	60.025	0.33006	61.444	61.236	61.566	1.4196					15	10	2	0	0	0	0.11478	1	25188	25188		44.407	3.9584	1	1487400			7702	2324	3735	3756	9481	9481					0.0937865454814073
GLARSEESD	9	Unmodified	_GLARSEESD_					0	0	0		ENSG00000122335|ENST00000647468|SERAC1;ENST00000607742.5_1_6:158538757-158579378:-|nuORF;nc|ENSG00000122335|Q96JX3-2|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.2226745486259	2	482.222528	962.430503	2.515	0.0012128	-0.27192	-0.00013113	2.2431	0.0010817	482.22196701850066	79.153	0.40729	79.453	79.247	79.654	0.30046					39	12	4	0	0	0	0.77526	1	33171	33171		4.3292	1.44	1	1524000			7703	2152	3736	3757	9482	9482					-0.05221478109524469
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	903.4827148318291	1	903.478188	902.470912	1.3361	0.0012072	0.9212	0.00083229	2.2574	0.0020395	903.4791746269979	32.769	0.21093	33.063	32.928	33.139	0.29431					11	6	2	0	0	0	0.031324	1	13738	13738		85.357	26.678	1	1100800			7704	5475	3737	3758	9483	9483					0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2431213259697	2	452.242732	902.470912	0.86737	0.00039226	0.39827	0.00018012	1.2656	0.00057238	452.242773882658	31.701	0.27525	32.982	32.865	33.141	1.2813					23	8	3	0	0	0	0.013238	2	13324	13277;13324		104.8	29.87	1	7136000			7705	5475	3737	3758	9484;9485	9485					0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	903.4774047732353	1	903.478188	902.470912	0.35519	0.00032091	1.6159	0.0014599	1.9711	0.0017808	903.4797964561074	31.742	0.33698	33.023	32.835	33.172	1.2813					26	10	3	0	0	0	0.00032761	3	13278	13278;13321;13360		136.33	54.443	1	9359500			7706	5475	3737	3758	9486;9487;9488	9486					0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2427551150322	2	452.242732	902.470912	1.0581	0.00047853	-0.3722	-0.00016832	0.68594	0.00031021	452.24246002470903	31.228	0.34949	33.053	32.865	33.215	1.8246					28	11	3	0	0	0	0.0054014	2	13110	13064;13110		120.45	38.56	1	13173000			7707	5475	3737	3758	9489;9490	9490					0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	903.4781371951103	1	903.478188	902.470912	0.68513	0.000619	1.7883	0.0016156	2.4734	0.0022346	903.4798816826865	31.264	0.319	33.089	32.896	33.215	1.8246					30	10	3	0	0	0	0.00090036	2	13065	13065;13111		133.7	41.211	1	6823300			7708	5475	3737	3758	9491;9492	9491					0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	452.242732	902.470912	1.3557	0.00061311	0.059613	2.696E-05	1.4153	0.00064007	452.24291687464796	33.142	0.29545	33.142	33.001	33.296	0	0.075303	7.7354E-05	NaN	120.45	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2157700			7709	5475	3737	3758							0.015774882809068913
GLATDVQTV	9	Unmodified	_GLATDVQTV_					0	0	0		ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	ENSG00000277791|ENST00000619426|PSMB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	452.242732	902.470912	1.8361	0.00083036	-0.19038	-8.6098E-05	1.6457	0.00074427	452.2425961284896	32.797	0.20826	33.091	32.959	33.167	0.29431	0.024293	-0.00014876	NaN	120.45	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1946300			7710	5475	3737	3758							0.015774882809068913
GLAVLCGLLL	10	Carbamidomethyl (C)	_GLAVLC(Carbamidomethyl (C))GLLL_	GLAVLC(1)GLLL		GLAVLC(71)GLLL		0	1	0			REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8153564333916	2	514.81227	1027.60999	3.3499	0.0017246	-0.82383	-0.00042412	2.5261	0.0013005	514.811846374459	64.854	0.3404	66.257	66.075	66.416	1.4035					24	10	3	0	0	0	0.069028	2	27180	27180;27230		70.865	10.791	1	1808700	+		7711	8466	3738	3759	9493;9494	9493	15				0.0972873464472741
GLAVLCGLLL	10	Carbamidomethyl (C)	_GLAVLC(Carbamidomethyl (C))GLLL_	GLAVLC(1)GLLL		GLAVLC(71)GLLL		0	1	0			REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8137695193291	2	514.81227	1027.60999	2.6764	0.0013778	-0.71844	-0.00036986	1.9579	0.001008	514.8118511280976	64.322	0.40992	66.25	66.045	66.455	1.928					27	12	3	0	0	0	0.069028	1	26970	26970		70.865	11.069	1	2103000	+		7712	8466	3738	3759	9495	9495	15				0.0972873464472741
GLAVLCGLLL	10	Carbamidomethyl (C)	_GLAVLC(Carbamidomethyl (C))GLLL_					0	1	0			REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	514.81227	1027.60999	2.0886	0.0010752	-2.4314	-0.0012517	-0.34279	-0.00017647	514.810696947115	66.14	0.18973	66.464	66.401	66.591	0.32449	0.14045	-0.0015056	NaN	70.865	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	354970	+		7713	8466	3738	3759			15				0.0972873464472741
GLAVLCGLLL	10	Carbamidomethyl (C)	_GLAVLC(Carbamidomethyl (C))GLLL_					0	1	0			REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	514.81227	1027.60999	3.3499	0.0017246	-0.82383	-0.00042412	2.5261	0.0013005	514.811846374459	64.854	0.3404	66.257	66.075	66.416	1.4035	-0.066652	0.00014956	NaN	70.865	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1808700	+		7714	8466	3738	3759			15				0.0972873464472741
GLAVLCGLLL	10	Carbamidomethyl (C)	_GLAVLC(Carbamidomethyl (C))GLLL_					0	1	0			REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	REV__ECE2|p.Q676Rfs*3|1|0.34|ENSG00000145194|chr3:184290568-184290568|C/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	514.81227	1027.60999	2.6764	0.0013778	-0.71844	-0.00036986	1.9579	0.001008	514.8118511280976	64.322	0.40992	66.25	66.045	66.455	1.928	-0.073796	0.00025807	NaN	70.865	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2103000	+		7715	8466	3738	3759			15				0.0972873464472741
GLCPMKLGIKL	11	Unmodified	_GLCPMKLGIKL_					0	0	0			REV__ENST00000269919.10_1_19:18475054-18475243:+|nuORF	REV__ENST00000269919.10_1_19:18475054-18475243:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.8464233279228	2	586.84833	1171.68211	1.8862	0.0011069	-0.62806	-0.00036857	1.2582	0.00073837	586.8479537387357	42.127	0.34246	42.127	41.98	42.322	0					23	10	3	0	0	0	0.62604	1	17608	17608		20.415	6.5085	1	2018700	+		7716	12229	3739	3760	9496	9496					0.10313325726792755
GLCSCCCSW	9	Unmodified	_GLCSCCCSW_					0	0	0		ENST00000305557.9_1_2:74657430-74657594:-|nuORF	ENST00000305557.9_1_2:74657430-74657594:-|nuORF	ENST00000305557.9_1_2:74657430-74657594:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2967407107353	2	481.155377	960.2962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.351	1	61.68	61.18	62.18	0.32974								0	0	0	0.42693	1	25704	25704		2.3027	1.5091	1				7717	5775	3740	3761	9497	9497					-0.1855361772344395
GLDAIITQV	9	Unmodified	_GLDAIITQV_					0	0	0		ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2692443728447	2	465.26875	928.522947	3.1404	0.0014611	-1.4291	-0.00066491	1.7113	0.00079623	465.26754461539156	63.976	0.24843	65.904	65.764	66.012	1.928					13	7	2	0	0	0	0.13873	1	26850	26850		39.957	5.8549	1	1742800			7718	7457	3741	3762	9498	9498					0.05582651694658125
GLDAIITQV	9	Unmodified	_GLDAIITQV_					0	0	0		ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	465.26875	928.522947	2.6047	0.0012119	-1.5962	-0.00074266	1.0085	0.00046922	465.26767559862503	65.553	0.095604	65.88	65.833	65.929	0.32689	-0.016905	-0.00020491	NaN	39.957	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334400			7719	7457	3741	3762							0.05582651694658125
GLDAIITQV	9	Unmodified	_GLDAIITQV_					0	0	0		ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	ENST00000586749.1_1_19:649375-650400:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	465.26875	928.522947	3.3704	0.0015682	-0.78699	-0.00036616	2.5835	0.001202	465.2670717718951	64.5	0.27602	65.907	65.74	66.016	1.4071	0.0098598	0.00054809	NaN	39.957	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1369500			7720	7457	3741	3762							0.05582651694658125
GLDALKVTV	9	Unmodified	_GLDALKVTV_					0	0	0		HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant;ENST00000447818.2_1_X:79827372-79827747:-|nuORF;ENSG00000159399|ENST00000290573|HK2	HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant	HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2800781130791	2	458.279118	914.543683	1.9851	0.00090971	0.44638	0.00020457	2.4314	0.0011143	458.2792825633792	45.914	0.40707	47.289	47.053	47.46	1.3751					37	12	4	0	0	0	0.0051116	2	19246	19209;19246		121.53	36.262	1	9607600			7721	3526	3742	3763	9499;9500	9500					0.08299242074326685
GLDALKVTV	9	Unmodified	_GLDALKVTV_					0	0	0		HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant;ENST00000447818.2_1_X:79827372-79827747:-|nuORF;ENSG00000159399|ENST00000290573|HK2	HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant	HK2|p.R849C|1|0.44|ENSG00000159399|chr2:74889414-74889414|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2803222537041	2	458.279118	914.543683	1.8028	0.00082618	0.1793	8.2168E-05	1.9821	0.00090835	458.279181261927	45.417	0.41238	47.376	47.176	47.589	1.9596					39	12	4	0	0	0	0.0080484	1	19021	19021		110.55	28.94	1	7071100			7722	3526	3742	3763	9501	9501					0.08299242074326685
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3199340701103	2	558.318971	1114.62339	1.2882	0.00071922	1.1187	0.00062457	2.4068	0.0013438	558.3196167242106	43.208	0.39662	43.208	42.999	43.395	0					30	12	3	0	0	0	0.063492	2	18065	18065;18115		100.71	39.107	1	5300200			7723	3416	3743	3764	9502;9503	9502					0.0706626395767671
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3200561404228	2	558.318971	1114.62339	1.7195	0.00096002	0.48445	0.00027048	2.2039	0.0012305	558.3192008060937	42.781	0.37552	43.101	42.88	43.256	0.32058					30	12	3	0	0	0	0.068074	3	17962	17917;17962;18010		108.26	37.93	1	5032500			7724	3416	3743	3764	9504;9505;9506	9505					0.0706626395767671
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3202392458916	2	558.318971	1114.62339	2.3547	0.0013147	0.30935	0.00017271	2.664	0.0014874	558.3191967786934	41.121	0.4404	42.446	42.21	42.65	1.3254					42	13	4	0	0	0	0.061315	3	17210	17210;17260;17299		108.26	33.307	1	13025000			7725	3416	3743	3764	9507;9508;9509	9507					0.0706626395767671
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	372.5489074587822	3	372.548406	1114.62339	1.3983	0.00052093	0.20282	7.556E-05	1.6011	0.00059649	372.54851940336204	41.121	0.53616	42.447	42.178	42.715	1.3254					62	16	5	0	0	0	0.11344	2	17221	17221;17258		53.47	15.664	1	30206000			7726	3416	3743	3764	9510;9511	9510					0.0706626395767671
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3196288943291	2	558.318971	1114.62339	2.0514	0.0011453	0.13176	7.3567E-05	2.1831	0.0012189	558.3190588768116	40.796	0.34742	42.689	42.452	42.8	1.8927					35	10	4	0	0	0	0.059807	3	17101	17054;17101;17141		121.93	42.333	1	15703000			7727	3416	3743	3764	9512;9513;9514	9513					0.0706626395767671
GLDDIKDLKV	10	Unmodified	_GLDDIKDLKV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;ENST00000488160.5_1_1:113239361-113241636:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	372.5486938357353	3	372.548406	1114.62339	1.7774	0.00066216	-0.59625	-0.00022213	1.1811	0.00044003	372.5481954709192	40.795	0.50702	42.688	42.389	42.896	1.8927					48	15	4	0	0	0	0.18015	2	17077	17077;17114		44.945	17.954	1	37085000			7728	3416	3743	3764	9515;9516	9515					0.0706626395767671
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2748901247978	2	510.274032	1018.53351	1.9808	0.0010107	0.11968	6.1071E-05	2.1005	0.0010718	510.2740924228762	79.407	0.6823	79.407	79.144	79.826	0					73	21	5	0	0	0	0.022807	6	33027	32982;33027;33064;33103;33143;33187		97.075	20.513	1	36900000			7729	5054	3744	3765	9517;9518;9519;9520;9521;9522	9518					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1019.541430652142	1	1019.54079	1018.53351	1.7641	0.0017985	0.053953	5.5008E-05	1.818	0.0018535	1019.5406099846113	79.407	0.49625	79.407	79.175	79.671	0					39	15	3	0	0	0	0.042029	2	33031	33031;33082		74.423	0	1	6272900			7730	5054	3744	3765	9523;9524	9523					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.2751953005791	2	510.274032	1018.53351	1.861	0.00094962	-0.041475	-2.1164E-05	1.8195	0.00092845	510.2739642583519	78.995	0.9936	79.305	78.957	79.951	0.30933					93	31	5	0	0	0	0.026628	5	33044	32949;32994;33044;33083;33129		92.822	17.514	1	34485000			7731	5054	3744	3765	9525;9526;9527;9528;9529	9527					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1019.542773425579	1	1019.54079	1018.53351	2.0432	0.0020831	-0.76928	-0.00078432	1.2739	0.0012988	1019.5399788111677	78.952	0.45789	79.261	79.078	79.536	0.30933					40	14	4	0	0	0	0.029093	2	32975	32975;33020		88.904	14.481	1	6895800			7732	5054	3744	3765	9530;9531	9530					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2743408083916	2	510.274032	1018.53351	2.8738	0.0014664	-0.9084	-0.00046354	1.9654	0.0010029	510.2734382073758	78.082	0.97401	79.363	78.95	79.924	1.2809					118	31	6	0	0	0	0.022807	3	32700	32700;32748;32800		97.075	11.718	1	144930000			7733	5054	3744	3765	9532;9533;9534	9532					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1019.542285144329	1	1019.54079	1018.53351	1.9143	0.0019517	0.32385	0.00033018	2.2382	0.0022819	1019.540258049694	78.076	0.60324	79.357	79.077	79.68	1.2809					62	19	4	0	0	0	0.029093	3	32737	32737;32786;32838		88.904	14.481	1	21043000			7734	5054	3744	3765	9535;9536;9537	9535					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1019.542468249798	1	1019.54079	1018.53351	1.3162	0.0013419	-1.1463	-0.0011687	0.16991	0.00017323	1019.5394012285734	77.631	0.58076	79.382	79.073	79.654	1.7514					52	18	4	0	0	0	0.018723	3	32520	32520;32565;32617		100.37	22.222	1	16018000			7735	5054	3744	3765	9538;9539;9540	9538					0.024986343491036678
GLDELFVQV	9	Unmodified	_GLDELFVQV_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2751342654228	2	510.274032	1018.53351	1.618	0.00082562	-1.1327	-0.00057798	0.48531	0.00024764	510.2732537599685	77.615	1.1719	79.366	79.041	80.213	1.7514					104	37	5	0	0	0	0.051699	1	32672	32672		67.344	16.489	1	122010000			7736	5054	3744	3765	9541	9541					0.024986343491036678
GLDFSVGLGV	10	Unmodified	_GLDFSVGLGV_					0	0	0			REV__tr|A0A553SQ66|A0A553SQ66_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_19810PE=3SV=1	REV__tr|A0A553SQ66|A0A553SQ66_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_19810PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.2601806521416	2	482.260925	962.507297	1.9405	0.00093582	-2.6376	-0.001272	-0.69714	-0.0003362	482.25931066315025	65.757	0.29123	65.757	65.546	65.837	0					15	8	2	0	0	0	0.35292	2	27410	27357;27410		36.127	3.8215	1	984330	+		7737	15122	3745	3766	9542;9543	9543					0.024543651776411934
GLDFSVGLGV	10	Unmodified	_GLDFSVGLGV_					0	0	0			REV__tr|A0A553SQ66|A0A553SQ66_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_19810PE=3SV=1	REV__tr|A0A553SQ66|A0A553SQ66_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_19810PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.2609130740166	2	482.260925	962.507297	2.7118	0.0013078	-2.9167	-0.0014066	-0.20484	-9.8786E-05	482.25948270903143	65.311	0.4454	65.638	65.356	65.801	0.32689					22	13	2	0	0	0	0.35292	1	27316	27316		36.127	1.7253	1	1346000	+		7738	15122	3745	3766	9544	9544					0.024543651776411934
GLDGSLVFL	9	Unmodified	_GLDGSLVFL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;ENST00000511802.5_1_5:10353827-10401026:+|nuORF	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	920.5137206912041	1	920.50876	919.501483	2.1197	0.0019512	-0.6284	-0.00057845	1.4913	0.0013728	920.5080827990334	82.956	0.33789	82.956	82.83	83.168	0					16	10	2	0	0	0	0.09539	2	34559	34559;34614		50.855	12.704	1	1490500			7739	3111	3746	3767	9545;9546	9545					0.03851266665969888
GLDGSLVFL	9	Unmodified	_GLDGSLVFL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;ENST00000511802.5_1_5:10353827-10401026:+|nuORF	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	920.5114013552666	1	920.50876	919.501483	2.2778	0.0020967	0.9722	0.00089492	3.25	0.0029916	920.5089910712626	82.531	0.30493	82.811	82.644	82.949	0.2802					17	9	2	0	0	0	0.09539	1	34481	34481		50.855	8.7605	1	1955700			7740	3111	3746	3767	9547	9547					0.03851266665969888
GLDGSLVFL	9	Unmodified	_GLDGSLVFL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;ENST00000511802.5_1_5:10353827-10401026:+|nuORF	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.5098754763603	1	920.50876	919.501483	3.4418	0.0031682	-0.92659	-0.00085293	2.5152	0.0023152	920.5076080330815	81.623	0.37109	82.856	82.595	82.966	1.2332					26	11	3	0	0	0	0.051699	2	34221	34221;34272		67.344	6.9543	1	3621500			7741	3111	3746	3767	9548;9549	9548					0.03851266665969888
GLDGSLVFL	9	Unmodified	_GLDGSLVFL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6;ENST00000511802.5_1_5:10353827-10401026:+|nuORF	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.5149413943291	1	920.50876	919.501483	2.979	0.0027422	0.1973	0.00018161	3.1763	0.0029238	920.5086658809447	81.168	0.3736	82.864	82.61	82.983	1.6959					25	11	3	0	0	0	0.051699	2	34012	34012;34062		67.344	6.9543	1	3496500			7742	3111	3746	3767	9550;9551	9550					0.03851266665969888
GLDIDGIYRV	10	Unmodified	_GLDIDGIYRV_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8004028201103	2	560.803488	1119.59242	1.395	0.00078232	-1.0808	-0.00060613	0.31418	0.00017619	560.802744025059	56.93	0.44378	56.93	56.78	57.224	0					46	14	4	0	0	0	0.048298	3	23732	23732;23783;23843		99.755	42.033	1	11557000			7743	3830	3747	3768	9552;9553;9554	9552					0.03741110643431966
GLDIDGIYRV	10	Unmodified	_GLDIDGIYRV_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.8002197146416	2	560.803488	1119.59242	2.1375	0.0011987	-0.25544	-0.00014325	1.882	0.0010555	560.8030208621046	56.51	0.46541	56.831	56.644	57.109	0.32103					39	15	3	0	0	0	0.062288	3	23656	23656;23705;23763		96.367	33.794	1	14824000			7744	3830	3747	3768	9555;9556;9557	9555					0.03741110643431966
GLDIDGIYRV	10	Unmodified	_GLDIDGIYRV_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8011962771416	2	560.803488	1119.59242	1.2995	0.00072876	0.27301	0.0001531	1.5725	0.00088186	560.8033141499753	55.394	0.43422	56.804	56.56	56.995	1.4099					52	14	5	0	0	0	0.043952	3	23143	23143;23194;23249		118.07	46.146	1	39232000			7745	3830	3747	3768	9558;9559;9560	9558					0.03741110643431966
GLDIDGIYRV	10	Unmodified	_GLDIDGIYRV_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8002807497978	2	560.803488	1119.59242	0.75826	0.00042524	0.97203	0.00054512	1.7303	0.00097035	560.8037417293021	54.917	0.43403	56.885	56.695	57.129	1.9684					49	14	5	0	0	0	0.048298	3	22971	22971;23009;23067		142.08	75.623	1	50144000			7746	3830	3747	3768	9561;9562;9563	9561					0.03741110643431966
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2702514529228	2	471.26875	940.522947	2.2678	0.0010688	0.84366	0.00039759	3.1115	0.0014664	471.2690322624514	65.692	0.44727	65.692	65.482	65.929	0					34	13	3	0	0	0	0.01454	3	27376	27327;27376;27418		103.75	22.135	1	7338900			7747	1531	3748	3769	9564;9565;9566	9565					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	941.5318481326103	1	941.530224	940.522947	1.7028	0.0016032	0.61077	0.00057506	2.3135	0.0021783	941.5308551560638	65.725	0.3864	65.725	65.513	65.9	0					28	11	3	0	0	0	0.007852	2	27391	27342;27391		111.29	33.138	1	2706100			7748	1531	3748	3769	9567;9568	9568					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2698852419853	2	471.26875	940.522947	2.657	0.0012522	-0.38181	-0.00017994	2.2752	0.0010722	471.2685320432042	65.263	0.51015	65.59	65.323	65.833	0.32689					37	15	3	0	0	0	0.037761	2	27321	27321;27363		78.149	10.069	1	4986200			7749	1531	3748	3769	9569;9570	9569					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	941.5323364138603	1	941.530224	940.522947	1.9603	0.0018457	0.3145	0.00029611	2.2748	0.0021418	941.5305598757054	65.3	0.41309	65.627	65.388	65.801	0.32689					30	12	3	0	0	0	0.026836	2	27376	27333;27376		92.491	10.878	1	3518000			7750	1531	3748	3769	9571;9572	9572					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	941.5324584841728	1	941.530224	940.522947	2.6446	0.00249	0.096356	9.0722E-05	2.741	0.0025807	941.5303130566159	64.142	0.46539	65.549	65.305	65.77	1.4071					33	14	3	0	0	0	0.019432	3	26913	26869;26913;26968		99.799	10.895	1	6421200			7751	1531	3748	3769	9573;9574;9575	9574					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2698547244072	2	471.26875	940.522947	2.9139	0.0013732	0.10123	4.7707E-05	3.0152	0.001421	471.2687754535121	64.198	0.52872	65.605	65.272	65.801	1.4071					48	16	4	0	0	0	0.031324	1	26943	26943		85.357	7.2073	1	12069000			7752	1531	3748	3769	9576	9576					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	941.5320312380791	1	941.530224	940.522947	3.0189	0.0028424	-0.21348	-0.000201	2.8055	0.0026414	941.5298684525964	63.638	0.49975	65.583	65.312	65.812	1.9444					36	15	3	0	0	0	0.007852	2	26716	26671;26716		111.29	29.397	1	5391800			7753	1531	3748	3769	9577;9578	9578					0.0503065169467618
GLDIPTVQV	9	Unmodified	_GLDIPTVQV_					0	0	0		ENST00000601772.1_1_19:19035054-19035967:+|nuORF;ENSG00000105671|ENST00000247003|DDX49	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2699462771416	2	471.26875	940.522947	3.1464	0.0014828	-0.076337	-3.5975E-05	3.07	0.0014468	471.2686549580197	63.609	0.49975	65.553	65.312	65.812	1.9444					50	15	4	0	0	0	0.019432	1	26734	26734		99.799	17.909	1	11215000			7754	1531	3748	3769	9579	9579					0.0503065169467618
GLDMEGILRV	10	Unmodified	_GLDMEGILRV_					0	0	0		ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.2606078982353	2	551.799891	1101.58523	1.7214	0.00094989	0.34397	0.0001898	2.0654	0.0011397	551.8004070133255	65.325	0.28108	67.234	67.095	67.376	1.9085					12	8	2	0	0	0	0.12345	1	27411	27411		29.841	13.993	1	834110			7755	2207	3749	3770	9580	9580					0.03850054771373834
GLDMEGILRV	10	Unmodified	_GLDMEGILRV_					0	0	0		ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	ENSG00000124143|ENST00000373345|ARHGAP40	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	551.799891	1101.58523	2.1689	0.0011968	1.205	0.00066493	3.3739	0.0018617	551.8008871862658	65.802	0.27542	67.2	67.034	67.31	1.3989	-0.016529	0.00060796	NaN	29.841	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	954990			7756	2207	3749	3770							0.03850054771373834
GLDNAVSLFQV	11	Unmodified	_GLDNAVSLFQV_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3127929568291	2	581.808771	1161.60299	1.7872	0.0010398	0.82712	0.00048122	2.6143	0.001521	581.8090280605933	79.705	0.25064	79.705	79.545	79.795	0					12	7	2	0	0	0	0.84637	1	33190	33190		13.042	1.4022	1	611020			7757	565	3750	3771	9581	9581					0.028650932978280252
GLDNAVSLFQV	11	Unmodified	_GLDNAVSLFQV_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	581.8088867068291	2	581.808771	1161.60299	1.6251	0.00094551	1.0055	0.000585	2.6306	0.0015305	581.8089073122507	79.23	0.28409	79.531	79.402	79.686	0.30047					14	8	2	0	0	0	0.58697	1	33120	33120		21.537	5.6898	1	694030			7758	565	3750	3771	9582	9582					0.028650932978280252
GLDNAVSLFQV	11	Unmodified	_GLDNAVSLFQV_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8112060427666	2	581.808771	1161.60299	2.5361	0.0014755	-0.3387	-0.00019706	2.1974	0.0012785	581.808911289074	78.325	0.36721	79.592	79.449	79.817	1.2668					25	11	3	0	0	0	0.09159	1	32886	32886		57.722	38.465	1	1979500			7759	565	3750	3771	9583	9583					0.028650932978280252
GLDNAVSLFQV	11	Unmodified	_GLDNAVSLFQV_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8123046755791	2	581.808771	1161.60299	1.53	0.00089017	1.1852	0.00068957	2.7152	0.0015797	581.8097563065935	77.854	0.31043	79.605	79.467	79.777	1.7514					22	9	3	0	0	0	0.20118	2	32649	32649;32700		39.95	24.103	1	1623000			7760	565	3750	3771	9584;9585	9584					0.028650932978280252
GLDPAVIKV	9	Unmodified	_GLDPAVIKV_					0	0	0		ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2823669314384	2	456.28166	910.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.188	1	44.542	44.042	45.042	1.3536								0	0	0	0.06286	1	18101	18101		41.84	18.691	1				7761	3864	3751	3772	9586	9586					0.08991545936953571
GLDPAVIKV	9	Unmodified	_GLDPAVIKV_					0	0	0		ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2844116091728	2	456.28166	910.548768	2.0237	0.00092339	1.4894	0.0006796	3.5132	0.001603	456.28227447145633	42.603	0.24785	44.524	44.384	44.632	1.9211					12	7	2	0	0	0	0.098163	1	17851	17851		49.933	23.049	1	1202100			7762	3864	3751	3772	9587	9587					0.08991545936953571
GLDPLGYEIQL	11	Unmodified	_GLDPLGYEIQL_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3256713747978	2	609.324254	1216.63395	2.7432	0.0016715	1.1783	0.00071799	3.9216	0.0023895	609.3246549002231	82.952	0.36715	84.165	83.983	84.35	1.2125					21	11	3	0	0	0	0.1347	1	34823	34823		49.554	26.818	1	1015400			7763	1742	3752	3773	9588	9588					0.034302466121062025
GLDPLGYEIQL	11	Unmodified	_GLDPLGYEIQL_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3282958865166	2	609.324254	1216.63395	2.9639	0.001806	1.13	0.00068854	4.0939	0.0024945	609.3257637704268	82.491	0.27688	84.161	84.017	84.294	1.67					17	8	3	0	0	0	0.14563	1	34611	34611		47.594	23.805	1	2204600			7764	1742	3752	3773	9589	9589					0.034302466121062025
GLDPLGYEIQL	11	Unmodified	_GLDPLGYEIQL_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	609.324254	1216.63395	2.3026	0.001403	-2.4366	-0.0014847	-0.13401	-8.1653E-05	609.3218056480497	83.828	0.20959	84.099	83.925	84.135	0.27029	-0.042933	-0.004159	NaN	49.554	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	383400			7765	1742	3752	3773							0.034302466121062025
GLDWALYSI	9	Unmodified	_GLDWALYSI_					0	0	0		nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1;ENSG00000163357|ENST00000295542|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1395751833916	2	519.26875	1036.52295	2.1423	0.0011124	-0.64843	-0.00033671	1.4938	0.00077571	519.2677591893344	57.737	0.21684	57.737	57.536	57.753	0					10	6	2	0	0	0	0.11333	1	24048	24048		13.508	0	1	419230			7766	3672	3753	3774	9590	9590					0.006146516946500924
GLDWALYSI	9	Unmodified	_GLDWALYSI_					0	0	0		nc|ENSG00000163357|Q5T197-2|DCST1;nc|ENSG00000163357|Q5T197-3|DCST1;ENSG00000163357|ENST00000295542|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	nc|ENSG00000163357|Q5T197-2|DCST1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.26875	1036.52295	0.75896	0.00039411	-0.13978	-7.2581E-05	0.61919	0.00032152	519.269232525348	55.704	0.14933	57.672	57.599	57.749	1.9684	0.00066644	0.00082054	NaN	13.508	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1067800			7767	3672	3753	3774							0.006146516946500924
GLDWIDQSL	9	Unmodified	_GLDWIDQSL_					0	0	0		ENSG00000006042|ENST00000579849|TMEM98	ENSG00000006042|ENST00000579849|TMEM98	ENSG00000006042|ENST00000579849|TMEM98	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.7232543826103	2	523.761289	1045.50803	2.6695	0.0013982	4.2545	0.0022283	6.9239	0.0036265	524.2662630045801	76.749	0.18657	78.042	77.92	78.106	1.2938					8	5	2	0	0	0	0.097511	1	32199	32199		23.148	9.6405	1	516860			7768	500	3754	3775	9591	9591					-0.01290840173351171
GLDWLSHEL	9	Unmodified	_GLDWLSHEL_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000463733.5_1_7:127230086-127231350:+|nuORF	ENSG00000004059|ENST00000000233|ARF5	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.2700073122978	2	535.269281	1068.52401	1.6833	0.00090102	0.34128	0.00018268	2.0246	0.0010837	535.2694910783581	66.217	0.38927	66.217	66.058	66.448	0					21	11	2	0	0	0	0.033794	2	27624	27571;27624		81.613	29.039	1	3467900			7769	467	3755	3776	9592;9593	9593					-0.007511339364327796
GLDWLSHEL	9	Unmodified	_GLDWLSHEL_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000463733.5_1_7:127230086-127231350:+|nuORF	ENSG00000004059|ENST00000000233|ARF5	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.2706786990166	2	535.269281	1068.52401	2.0047	0.0010731	0.30064	0.00016093	2.3054	0.001234	535.2694042044271	65.774	0.50558	66.101	65.865	66.37	0.32689					35	15	3	0	0	0	0.029093	2	27558	27505;27558		88.904	31.432	1	4308900			7770	467	3755	3776	9594;9595	9595					-0.007511339364327796
GLDWLSHEL	9	Unmodified	_GLDWLSHEL_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000463733.5_1_7:127230086-127231350:+|nuORF	ENSG00000004059|ENST00000000233|ARF5	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.2709838747978	2	535.269281	1068.52401	3.2544	0.001742	-0.42573	-0.00022788	2.8287	0.0015141	535.2691786309299	64.58	0.67863	65.987	65.71	66.388	1.4071					44	21	3	0	0	0	0.029093	3	27047	27047;27093;27136		88.904	31.432	1	12141000			7771	467	3755	3776	9596;9597;9598	9596					-0.007511339364327796
GLDWLSHEL	9	Unmodified	_GLDWLSHEL_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000463733.5_1_7:127230086-127231350:+|nuORF	ENSG00000004059|ENST00000000233|ARF5	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.2705566287041	2	535.269281	1068.52401	2.9572	0.0015829	-0.25966	-0.00013899	2.6975	0.0014439	535.2692175164254	64.009	0.59189	65.937	65.733	66.325	1.928					40	18	3	0	0	0	0.026628	3	26832	26832;26869;26915		92.822	41.967	1	10955000			7772	467	3755	3776	9599;9600;9601	9599					-0.007511339364327796
GLDWLSNEL	9	Unmodified	_GLDWLSNEL_					0	0	0		ENSG00000168374|ENST00000303436|ARF4	ENSG00000168374|ENST00000303436|ARF4	ENSG00000168374|ENST00000303436|ARF4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.7244750857353	2	523.761289	1045.50803	2.7446	0.0014375	-1.9358	-0.0010139	0.80881	0.00042362	523.7597856528868	76.239	0.25083	78.006	77.845	78.095	1.7672					10	7	2	0	0	0	0.11463	1	31963	31963		7.9102	3.1541	1	218560			7773	4031	3756	3777	9602	9602					-0.01290840173351171
GLEDYLLGL	9	Unmodified	_GLEDYLLGL_					0	0	0		tr|A0A553SKJ0|A0A553SKJ0_NIACIU32familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_18720PE=3SV=1	tr|A0A553SKJ0|A0A553SKJ0_NIACIU32familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_18720PE=3SV=1	tr|A0A553SKJ0|A0A553SKJ0_NIACIU32familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_18720PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7678710818291	2	496.768583	991.522613	1.3653	0.00067825	-0.5989	-0.00029752	0.76643	0.00038074	496.7680920696449	79.711	0.24672	81.428	81.353	81.6	1.7167					13	7	2	0	0	0	0.64949	1	33439	33439		9.3474	0	1	845650			7774	16292	3757	3778	9603	9603					0.02651231974800794
GLEILGPK	8	Unmodified	_GLEILGPK_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7541686892509	2	413.755278	825.496004	1.0627	0.00043971	-2.9383	-0.0012157	-1.8755	-0.00077601	413.7544771569785	82.976	0.40123	82.976	82.737	83.138	0					20	12	2	0	0	0	0.88504	1	34587	34587		5.7604	0	1	1835000			7775	669	3758	3779	9604	9604					0.07627587874139863
GLEQQENLPR	10	Unmodified	_GLEQQENLPR_					0	0	0		ENST00000394456.9_1_19:6389571-6391922:-|nuORF	ENST00000394456.9_1_19:6389571-6391922:-|nuORF	ENST00000394456.9_1_19:6389571-6391922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	592.3054687380791	2	592.306926	1182.5993	0.4352	0.00025777	-1.0364	-0.00061387	-0.60122	-0.0003561	592.3059325031951	19.294	0.23656	19.487	19.325	19.562	0.19342					13	7	2	0	0	0	0.8325	1	8008	8008		8.7454	0.83525	1	897450			7776	6281	3759	3780	9605	9605					0.015304235239909758
GLEQQENLPR	10	Unmodified	_GLEQQENLPR_					0	0	0		ENST00000394456.9_1_19:6389571-6391922:-|nuORF	ENST00000394456.9_1_19:6389571-6391922:-|nuORF	ENST00000394456.9_1_19:6389571-6391922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3083984255791	2	592.306926	1182.5993	0.68041	0.00040301	1.0241	0.00060659	1.7045	0.0010096	592.3076365390702	18.642	0.389	19.621	19.506	19.895	0.97922					22	12	3	0	0	0	0.79268	1	7793	7793		13.042	0.80181	1	1444400			7777	6281	3759	3780	9606	9606					0.015304235239909758
GLFAPQFYV	9	Unmodified	_GLFAPQFYV_					0	0	0		nc|ENSG00000136603|P12757-2|SKIL;nc|ENSG00000136603|P12757-4|SKIL;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL;ENSG00000136603|ENST00000259119|SKIL	nc|ENSG00000136603|P12757-2|SKIL	nc|ENSG00000136603|P12757-2|SKIL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.7330200076103	2	521.273835	1040.53312	2.4004	0.0012513	-1.8586	-0.00096885	0.54179	0.00028242	521.2727319073397	82.56	0.30619	82.56	82.43	82.737	0					15	9	2	0	0	0	0.20838	1	34410	34410		32.117	18.609	1	1322600			7778	7878	3760	3781	9607	9607					0.014472594198878141
GLFAPQFYV	9	Unmodified	_GLFAPQFYV_					0	0	0		nc|ENSG00000136603|P12757-2|SKIL;nc|ENSG00000136603|P12757-4|SKIL;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL;ENSG00000136603|ENST00000259119|SKIL	nc|ENSG00000136603|P12757-2|SKIL	nc|ENSG00000136603|P12757-2|SKIL	MSMS	GG20161007_CRH_Patient100_A02_02	2	521.2725097537041	2	521.273835	1040.53312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.089	1	82.369	81.869	82.869	0.2802								0	0	0	0.11829	1	34325	34325		32.117	18.609	1				7779	7878	3760	3781	9608	9608					0.014472594198878141
GLFAPQFYV	9	Unmodified	_GLFAPQFYV_					0	0	0		nc|ENSG00000136603|P12757-2|SKIL;nc|ENSG00000136603|P12757-4|SKIL;nc|ENSG00000136603|P12757-3|SKIL;nc|ENSG00000136603|P12757-5|SKIL;ENSG00000136603|ENST00000259119|SKIL	nc|ENSG00000136603|P12757-2|SKIL	nc|ENSG00000136603|P12757-2|SKIL	MSMS	GG20161007_CRH_Patient100_A02_02	2	521.2736694216728	2	521.273835	1040.53312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.222	1	82.502	82.002	83.002	0.2802								0	0	0	0.39421	1	34381	34381		9.3474	4.1168	1				7780	7878	3760	3781	9609	9609					0.014472594198878141
GLFDGLVSL	9	Unmodified	_GLFDGLVSL_					0	0	0		ENST00000518140.5_1_5:168199753-168727722:-|nuORF;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;ENST00000519486.5_1_5:168179958-168216668:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.5131713747978	1	920.50876	919.501483	4.103	0.0037769	0.5817	0.00053546	4.6847	0.0043123	920.5092107669765	92.258	0.35363	93.194	92.955	93.309	0.93623					25	10	3	0	0	0	0.069258	3	38846	38797;38846;38882		60.39	5.616	1	3659100			7781	4690	3761	3782	9610;9611;9612	9611					0.038512666659471506
GLFDGLVSL	9	Unmodified	_GLFDGLVSL_					0	0	0		ENST00000518140.5_1_5:168199753-168727722:-|nuORF;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;ENST00000519486.5_1_5:168179958-168216668:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.5031616091728	1	920.50876	919.501483	3.2842	0.0030231	0.96554	0.00088878	4.2497	0.0039119	920.5101486811611	91.807	0.32066	93.134	92.989	93.31	1.3269					14	9	2	0	0	0	0.069258	2	38614	38614;38673		60.39	8.1212	1	2814500			7782	4690	3761	3782	9613;9614	9613					0.038512666659471506
GLFDQHFRL	9	Unmodified	_GLFDQHFRL_					0	0	0		ENST00000467594.1_1_3:52524105-52525540:+|nuORF;nc|ENSG00000010322|Q9Y2I1-2|NISCH;ENSG00000010322|ENST00000345716|NISCH	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2008849978447	3	378.201452	1131.58253	2.1492	0.00081284	-1.1196	-0.00042344	1.0296	0.00038939	378.2001560410431	56.799	0.34589	57.12	56.962	57.308	0.32103					20	11	3	0	0	0	0.17276	1	23815	23815		27.223	5.6331	1	2213900			7783	552	3762	3783	9615	9615					0.021999674287144444
GLFDQHFRL	9	Unmodified	_GLFDQHFRL_					0	0	0		ENST00000467594.1_1_3:52524105-52525540:+|nuORF;nc|ENSG00000010322|Q9Y2I1-2|NISCH;ENSG00000010322|ENST00000345716|NISCH	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2012206912041	3	378.201452	1131.58253	0.059903	2.2655E-05	-1.7344	-0.00065593	-1.6744	-0.00063328	378.2008857786769	55.676	0.29316	57.086	56.85	57.144	1.4099					14	11	2	0	0	0	0.091139	1	23348	23348		40.239	18.649	1	5069000			7784	552	3762	3783	9616	9616					0.021999674287144444
GLFDQHFRL	9	Unmodified	_GLFDQHFRL_					0	0	0		ENST00000467594.1_1_3:52524105-52525540:+|nuORF;nc|ENSG00000010322|Q9Y2I1-2|NISCH;ENSG00000010322|ENST00000345716|NISCH	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	ENST00000467594.1_1_3:52524105-52525540:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2012512087822	3	378.201452	1131.58253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.141	1	57.109	56.609	57.609	1.9684								0	0	0	0.091705	1	23120	23120		27.223	9.3601	1				7785	552	3762	3783	9617	9617					0.021999674287144444
GLFDTAISL	9	Unmodified	_GLFDTAISL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	936.5048705935478	1	936.503674	935.496398	2.5208	0.0023608	0.96393	0.00090272	3.4848	0.0032635	936.5053918996473	84.273	0.2866	84.534	84.406	84.693	0.26083					18	8	3	0	0	0	0.03795	1	35249	35249		77.984	6.8507	1	1310500			7786	633	3763	3784	9618	9618					0.026069628033155823
GLFDTAISL	9	Unmodified	_GLFDTAISL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7562744021416	2	468.755475	935.496398	2.1295	0.00099824	-0.84371	-0.00039549	1.2858	0.00060274	468.7550461163094	83.469	0.28388	84.657	84.484	84.767	1.1879					11	8	2	0	0	0	0.09539	1	35040	35040		50.855	0	1	1370400			7787	633	3763	3784	9619	9619					0.026069628033155823
GLFDTAISL	9	Unmodified	_GLFDTAISL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.5040771365166	1	936.503674	935.496398	2.0946	0.0019616	-0.97619	-0.00091421	1.1184	0.0010474	936.503584515255	83.453	0.28388	84.641	84.484	84.767	1.1879					18	8	3	0	0	0	0.069258	1	35051	35051		60.39	5.616	1	3349200			7788	633	3763	3784	9620	9620					0.026069628033155823
GLFDTAISL	9	Unmodified	_GLFDTAISL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	936.5067626833916	1	936.503674	935.496398	2.4418	0.0022868	-1.0232	-0.00095825	1.4186	0.0013285	936.5029830190564	83.014	0.28114	84.652	84.509	84.791	1.6379					14	8	2	0	0	0	0.051699	1	34807	34807		67.344	5.9864	1	5217300			7789	633	3763	3784	9621	9621					0.026069628033155823
GLFFMKQSV	9	Unmodified	_GLFFMKQSV_					0	0	0		ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.7819091677666	2	528.78097	1055.54739	1.9768	0.0010453	-1.4233	-0.00075263	0.55343	0.00029265	528.7802911177168	55.577	0.29451	55.577	55.362	55.656	0					16	10	2	0	0	0	0.019432	1	23128	23128		99.799	72.17	1	2000900			7790	7323	3764	3785	9622	9622					0.021835885765540297
GLFFMKQSV	9	Unmodified	_GLFFMKQSV_					0	0	0		ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.7817260622978	2	528.78097	1055.54739	2.1516	0.0011377	-1.5704	-0.00083042	0.5812	0.00030733	528.7803962279842	54.921	0.26403	55.242	55.056	55.32	0.32088					19	8	3	0	0	0	0.037098	2	23007	22958;23007		78.728	40.577	1	2329900			7791	7323	3764	3785	9623;9624	9624					0.021835885765540297
GLFFMKQSV	9	Unmodified	_GLFFMKQSV_					0	0	0		ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7809936404228	2	528.78097	1055.54739	1.0792	0.00057067	-2.349	-0.0012421	-1.2698	-0.00067143	528.7791650232137	53.593	0.47655	54.994	54.778	55.255	1.4005					38	20	3	0	0	0	0.00026547	2	22407	22407;22457		139.14	92.218	1	12057000			7792	7323	3764	3785	9625;9626	9625					0.021835885765540297
GLFFMKQSV	9	Unmodified	_GLFFMKQSV_					0	0	0		ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	ENST00000559345.5_1_15:79165548-79172860:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7797729372978	2	528.78097	1055.54739	0.97005	0.00051294	-3.1139	-0.0016466	-2.1439	-0.0011337	528.7791441784656	53.007	0.39181	54.977	54.842	55.234	1.9697					37	19	3	0	0	0	1.0041E-05	2	22220	22220;22263		181.33	129.06	1	9193200			7793	7323	3764	3785	9627;9628	9627					0.021835885765540297
GLFFTPTAV	9	Unmodified	_GLFFTPTAV_					0	0	0		ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	ENSG00000102452|ENST00000251127|NALCN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	475.9625427126884	2	476.760561	951.506569	2.493	0.0011886	-0.16422	-7.8295E-05	2.3288	0.0011103	476.76073879904993	52.241	0.37017	52.566	52.313	52.683	0.32554					23	11	3	0	0	0	0.11333	1	21919	21919		13.508	0	1	2613600			7794	1392	3765	3786	9629	9629					0.028875705285713593
GLFGRLPLV	9	Unmodified	_GLFGRLPLV_					0	0	0			REV__ENST00000491113.1_1_20:35234354-35236222:+|nuORF	REV__ENST00000491113.1_1_20:35234354-35236222:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3077270388603	2	486.30547	970.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.907	1	65.835	65.335	66.335	1.928								0	0	0	0.14418	1	26813	26813		30.225	0	1		+		7795	9022	3766	3787	9630	9630					0.10991244927788557
GLFIPMEEQ	9	Unmodified	_GLFIPMEEQ_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;ENST00000471341.5_1_1:155785942-155827007:-|nuORF	ENSG00000116580|ENST00000368331|GON4L	ENSG00000116580|ENST00000368331|GON4L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.7130615115166	3	355.175804	1062.50558	1.2202	0.00043337	-1.0561	-0.00037512	0.164	5.825E-05	355.17493297429854	59.258	0.52313	60.677	60.467	60.99	1.4196					21	16	2	0	0	0	0.11716	1	24873	24873		4.897	0.36815	1	729700			7796	1974	3767	3788	9631	9631					-0.023170119026417524
GLFNMGLKEV	10	Unmodified	_GLFNMGLKEV_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2996703982353	2	554.296985	1106.57942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.285	1	59.703	59.203	60.203	1.4181								0	0	0	0.18994	1	24437	24437		38.615	19.176	1				7797	4692	3768	3789	9632	9632					0.030389562596838005
GLFPWTPKL	9	Unmodified	_GLFPWTPKL_					0	0	0		INADL-EIF3E|1|fusion;nc|ENSG00000132849|Q8NI35-4|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-3|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ	INADL-EIF3E|1|fusion	INADL-EIF3E|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	529.7645751833916	2	529.805303	1057.59605	1.9134	0.0010137	-0.44688	-0.00023676	1.4665	0.00077697	529.8052112502569	75.926	0.31748	75.926	75.787	76.105	0					14	9	2	0	0	0	0.058421	1	31654	31654		38.176	7.9508	1	1682400			7798	7657	3769	3790	9633	9633					0.0695582520793323
GLFPWTPKL	9	Unmodified	_GLFPWTPKL_					0	0	0		INADL-EIF3E|1|fusion;nc|ENSG00000132849|Q8NI35-4|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-3|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ	INADL-EIF3E|1|fusion	INADL-EIF3E|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8076660037041	2	529.805303	1057.59605	3.412	0.0018077	4.2483	0.0022507	7.6602	0.0040584	529.8077960291729	74.227	0.42924	75.545	75.31	75.739	1.318					30	13	3	0	0	0	0.079895	1	31106	31106		56.177	31.503	1	5523400			7799	7657	3769	3790	9634	9634					0.0695582520793323
GLFPWTPKL	9	Unmodified	_GLFPWTPKL_					0	0	0		INADL-EIF3E|1|fusion;nc|ENSG00000132849|Q8NI35-4|PATJ;ENST00000459752.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-3|PATJ;ENST00000484562.5_1_1:62228564-62579919:+|nuORF;nc|ENSG00000132849|Q8NI35-2|PATJ;nc|ENSG00000132849|Q8NI35|PATJ;ENSG00000132849|ENST00000642238|PATJ	INADL-EIF3E|1|fusion	INADL-EIF3E|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8104125857353	2	529.805303	1057.59605	3.0609	0.0016217	4.0714	0.002157	7.1323	0.0037787	529.8072657056649	73.724	0.40274	75.52	75.255	75.657	1.7962					34	12	3	0	0	0	0.057024	2	30931	30883;30931		65.235	28.004	1	5727000			7800	7657	3769	3790	9635;9636	9636					0.0695582520793323
GLFQGKTPL	9	Unmodified	_GLFQGKTPL_					0	0	0		ENSG00000088325|ENST00000300403|TPX2;nc|ENSG00000088325|Q9ULW0-2|TPX2	ENSG00000088325|ENST00000300403|TPX2	ENSG00000088325|ENST00000300403|TPX2	MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7801086306572	2	480.779285	959.544017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.939	1	41.25	40.75	41.75	1.3102								0	0	0	0.082379	1	16752	16752		37.974	17.103	1				7801	1099	3770	3791	9637	9637					0.06262661794187352
GLFVAVSYLF	10	Unmodified	_GLFVAVSYLF_					0	0	0			REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3112060427666	2	558.310418	1114.60628	3.9715	0.0022173	-3.5575	-0.0019862	0.414	0.00023114	558.3080805141799	86.965	0.27995	88.057	87.899	88.179	1.0918					17	9	3	0	0	0	0.62746	1	36683	36683		21.747	0	1	1619500	+		7802	15401	3771	3792	9638	9638					0.05356388142513424
GLFVAVSYLF	10	Unmodified	_GLFVAVSYLF_					0	0	0			REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	558.3112060427666	2	558.310418	1114.60628	4.0933	0.0022854	3.3647	0.0018785	7.458	0.0041639	558.8141177590702	87.055	0.14857	88.147	88.062	88.21	1.0918					6	4	2	0	0	0	0.12397	1	36683	36683		21.747	0	1	1205600	+		7803	15401	3771	3792	9639	9639					0.05356388142513424
GLFVAVSYLF	10	Unmodified	_GLFVAVSYLF_					0	0	0			REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	558.310418	1114.60628	3.9715	0.0022173	-3.5575	-0.0019862	0.414	0.00023114	558.3080805141799	86.965	0.27995	88.057	87.899	88.179	1.0918	0.042654	-0.00034769	NaN	21.747	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1619500	+		7804	15401	3771	3792							0.05356388142513424
GLFVAVSYLF	10	Unmodified	_GLFVAVSYLF_					0	0	0			REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	558.310418	1114.60628	4.2024	0.0023463	-3.0796	-0.0017194	1.1229	0.00062692	558.3080182860709	86.425	0.41359	87.972	87.879	88.293	1.547	-0.042654	0.00018603	NaN	21.747	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1589300	+		7805	15401	3771	3792							0.05356388142513424
GLGAPVIK	8	Unmodified	_GLGAPVIK_					0	0	0			REV__tr|A0A7D7AE28|A0A7D7AE28_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01285PE=4SV=1	REV__tr|A0A7D7AE28|A0A7D7AE28_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7465698122978	2	377.744714	753.474875	1.4494	0.0005475	2.5906	0.00097859	4.04	0.0015261	377.74600072573423	68.432	0.81116	68.754	68.377	69.188	0.32224					55	25	3	0	0	0	0.89176	1	28642	28642		0.79363	0	1	4671300	+		7806	15911	3772	3793	9640	9640					0.0882762256528622
GLGAPVIK	8	Unmodified	_GLGAPVIK_					0	0	0			REV__tr|A0A7D7AE28|A0A7D7AE28_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01285PE=4SV=1	REV__tr|A0A7D7AE28|A0A7D7AE28_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01285PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	377.744714	753.474875	1.3257	0.00050078	3.5713	0.0013491	4.8971	0.0018498	377.7459888837215	66.482	0.59058	68.371	68.025	68.616	1.8889	-0.19153	0.000302	NaN	0.79363	48	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3741500	+		7807	15911	3772	3793							0.0882762256528622
GLGELAGLTV	10	Unmodified	_GLGELAGLTV_					0	0	0		nc|ENSG00000115808|O43815-2|STRN;ENSG00000115808|ENST00000263918|STRN	nc|ENSG00000115808|O43815-2|STRN	nc|ENSG00000115808|O43815-2|STRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	929.5274536013603	1	929.530224	928.522947	1.5039	0.0013979	-1.414	-0.0013144	0.089926	8.3589E-05	929.527315802121	70.348	0.26675	70.348	70.21	70.477	0					12	8	2	0	0	0	0.24174	1	29273	29273		43.858	5.6827	1	706730			7808	1936	3773	3794	9641	9641					0.05582651694658125
GLGELAGLTV	10	Unmodified	_GLGELAGLTV_					0	0	0		nc|ENSG00000115808|O43815-2|STRN;ENSG00000115808|ENST00000263918|STRN	nc|ENSG00000115808|O43815-2|STRN	nc|ENSG00000115808|O43815-2|STRN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	929.5337402224541	1	929.530224	928.522947	1.3339	0.0012399	0.81823	0.00076057	2.1521	0.0020004	929.5310041493142	69.854	0.25404	70.176	70.034	70.288	0.32224					11	7	2	0	0	0	0.051733	1	29246	29246		78.149	19.471	1	650010			7809	1936	3773	3794	9642	9642					0.05582651694658125
GLGELAGLTV	10	Unmodified	_GLGELAGLTV_					0	0	0		nc|ENSG00000115808|O43815-2|STRN;ENSG00000115808|ENST00000263918|STRN	nc|ENSG00000115808|O43815-2|STRN	nc|ENSG00000115808|O43815-2|STRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	929.5338012576103	1	929.530224	928.522947	2.275	0.0021147	2.4276	0.0022565	4.7026	0.0043712	929.5311283211812	68.837	0.35312	70.203	70.028	70.381	1.3657					19	10	2	0	0	0	0.060543	2	28868	28868;28923		120.45	42.301	1	1595000			7810	1936	3773	3794	9643;9644	9643					0.05582651694658125
GLGELAGLTV	10	Unmodified	_GLGELAGLTV_					0	0	0		nc|ENSG00000115808|O43815-2|STRN;ENSG00000115808|ENST00000263918|STRN	nc|ENSG00000115808|O43815-2|STRN	nc|ENSG00000115808|O43815-2|STRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	929.5319702029228	1	929.530224	928.522947	2.2662	0.0021065	1.8814	0.0017488	4.1476	0.0038553	929.530391852747	68.316	0.28761	70.186	70.01	70.298	1.87					14	8	2	0	0	0	0.052892	1	28645	28645		88.904	26.331	1	1413300			7811	1936	3773	3794	9645	9645					0.05582651694658125
GLGELGESFI	10	Unmodified	_GLGELGESFI_					0	0	0			REV__CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	REV__CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2634765505791	2	511.263665	1020.51278	2.6808	0.0013706	-0.19954	-0.00010202	2.4812	0.0012686	511.26349890458596	76.679	0.76981	78.447	78.095	78.865	1.7672					31	23	2	0	0	0	0.79742	1	32090	32090		12.532	3.1841	1	1143400	+		7812	8204	3774	3795	9646	9646					0.003340439694284214
GLGFKAKLFKF	11	Unmodified	_GLGFKAKLFKF_					0	0	0			REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3835937380791	2	628.381709	1254.74886	2.0785	0.0013061	1.4342	0.00090123	3.5128	0.0022073	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	1.0362	2	33129	33129;33171		1.3295	0.13619	1	6184900	+		7813	11259	3775	3796	9647;9648	9647					0.13168020604530284
GLGFKAKLFKF	11	Unmodified	_GLGFKAKLFKF_					0	0	0			REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3838989138603	2	628.381709	1254.74886	2.2153	0.0013921	1.6789	0.001055	3.8941	0.002447	628.3827071245355	80.74	0.59271	80.74	80.447	81.04	0					36	18	3	0	0	0	1.0362	1	33592	33592		1.3295	0.13619	1	1573100	+		7814	11259	3775	3796	9649	9649					0.13168020604530284
GLGFKAKLFKF	11	Unmodified	_GLGFKAKLFKF_					0	0	0			REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3837158083916	2	628.381709	1254.74886	2.0099	0.001263	1.8396	0.0011559	3.8495	0.0024189	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	1.0362	1	32267	32267		1.3295	0.13619	1	2978200	+		7815	11259	3775	3796	9650	9650					0.13168020604530284
GLGFKAKLFKF	11	Unmodified	_GLGFKAKLFKF_					0	0	0			REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3842040896416	2	628.381709	1254.74886	1.2793	0.0008039	2.0841	0.0013096	3.3634	0.0021135	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	1.0031	1	32867	32867		3.5965	0.8613	1	6175000	+		7816	11259	3775	3796	9651	9651					0.13168020604530284
GLGGVFKV	8	Unmodified	_GLGGVFKV_					0	0	0		ENST00000512600.1_1_5:112919975-112927944:+|nuORF;ENSG00000047188|ENST00000161863|YTHDC2	ENST00000512600.1_1_5:112919975-112927944:+|nuORF	ENST00000512600.1_1_5:112919975-112927944:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1528808474541	2	388.736889	775.459225	1.7692	0.00068774	-0.47691	-0.00018539	1.2923	0.00050235	388.7370757442339	43.358	0.19249	43.682	43.547	43.739	0.32388					8	5	2	0	0	0	2.3239	1	18194	18194		2.3027	0	1	467420			7817	676	3776	3797	9652	9652					0.06251336048239864
GLGKLYLFC	9	Unmodified	_GLGKLYLFC_					0	0	0			REV__ENST00000245817.4_1_19:6535085-6535202:+|nuORF	REV__ENST00000245817.4_1_19:6535085-6535202:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	507.8147155642509	2	507.278063	1012.54157	2.6916	0.0013654	3.2156	0.0016312	5.9072	0.0029966	507.27962725612736	84.957	0.51184	84.957	84.749	85.261	0					33	15	3	0	0	0	0.094078	1	35509	35509		18.135	2.2878	1	1787900	+		7818	12135	3777	3798	9653	9653					0.03580490064859987
GLGLLFAFTV	10	Unmodified	_GLGLLFAFTV_					0	0	0		nc|ENSG00000134313|Q9ULH0-3|KIDINS220;KIDINS220|p.H1622Qfs*20|1|0.07|ENSG00000134313|chr2:8731170-8731171|-/CACTTTGTTGGCAATTTTTAAAGCCC|frameshift_variant;KIDINS220|p.L1658*|1|0.1|ENSG00000134313|chr2:8731063-8731063|A/-|frameshift_variant;nc|ENSG00000134313|Q9ULH0-2|KIDINS220;ENST00000488729.5_1_2:8870852-8965899:-|nuORF;nc|ENSG00000134313|Q9ULH0-4|KIDINS220;ENSG00000134313|ENST00000256707|KIDINS220	nc|ENSG00000134313|Q9ULH0-3|KIDINS220	nc|ENSG00000134313|Q9ULH0-3|KIDINS220	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1406127810478	2	519.305136	1036.59572	0.91256	0.0004739	0.33633	0.00017466	1.2489	0.00064856	519.3057131172799	53.003	0.38562	54.404	54.184	54.57	1.4005					17	11	2	0	0	0	0.12438	1	22240	22240		7.2892	0	1	938240			7819	2607	3778	3799	9654	9654					0.07888405488074568
GLGLLHALLL	10	Unmodified	_GLGLLHALLL_					0	0	0		nc|ENSG00000203618|P13224|GP1BB;nc|ENSG00000203618|P13224-2|GP1BB	nc|ENSG00000203618|P13224|GP1BB	nc|ENSG00000203618|P13224|GP1BB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.7957641482353	2	510.334227	1018.6539	3.4322	0.0017516	-1.7203	-0.00087792	1.7119	0.00087365	510.3331769183081	61.247	1.2136	62.664	61.993	63.207	1.4179					60	38	2	0	0	0	0.12288	1	25759	25759		24.674	6.5389	1	978890			7820	7972	3779	3800	9655	9655					0.14532087133352434
GLGPNLVGV	9	Unmodified	_GLGPNLVGV_					0	0	0		nc|ENSG00000114120|Q96CQ1-2|SLC25A36;nc|ENSG00000114120|Q96CQ1-3|SLC25A36;ENSG00000114120|ENST00000324194|SLC25A36;ENSG00000171612|ENST00000302692|SLC25A33	nc|ENSG00000114120|Q96CQ1-2|SLC25A36	nc|ENSG00000114120|Q96CQ1-2|SLC25A36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	825.4838134646416	1	825.482879	824.475603	1.4308	0.0011811	0.94887	0.00078328	2.3797	0.0019644	825.4838834000976	54.435	0.28814	55.84	55.676	55.964	1.4048					13	8	2	0	0	0	0.19075	1	22786	22786		34.102	1.9855	1	895200			7821	1851	3780	3801	9656	9656					0.05634417214332643
GLGQLGFHV	9	Unmodified	_GLGQLGFHV_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3;ENST00000601881.1_1_19:38610303-38621413:+|nuORF;nc|ENSG00000116991|Q9P2F8-2|SIPA1L2;ENSG00000116991|ENST00000674635|SIPA1L2;nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2563964724541	2	464.255977	926.497401	1.8771	0.00087144	-2.3343	-0.0010837	-0.4572	-0.00021226	464.25479597317513	50.197	0.2421	52.174	52.007	52.25	1.9772					12	7	2	0	0	0	0.18999	1	21034	21034		34.187	7.8461	1	645770			7822	5013;1994;1540	3781	3802	9657	9657					0.031212219629082938
GLGQLGFHV	9	Unmodified	_GLGQLGFHV_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3;ENST00000601881.1_1_19:38610303-38621413:+|nuORF;nc|ENSG00000116991|Q9P2F8-2|SIPA1L2;ENSG00000116991|ENST00000674635|SIPA1L2;nc|ENSG00000197555|O43166-3|SIPA1L1;ENSG00000197555|ENST00000381232|SIPA1L1;nc|ENSG00000197555|O43166|SIPA1L1	ENSG00000105738|ENST00000222345|SIPA1L3;ENSG00000116991|ENST00000674635|SIPA1L2;nc|ENSG00000197555|O43166-3|SIPA1L1	nc|ENSG00000197555|O43166-3|SIPA1L1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	464.255977	926.497401	1.6872	0.00078332	-1.4557	-0.00067582	0.23155	0.0001075	464.25551910569595	50.783	0.2098	52.177	52.016	52.226	1.3938	0.0013651	0.00050606	NaN	34.187	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	918170			7823	5013;1994;1540	3781	3802							0.031212219629082938
GLGSFVVGV	9	Unmodified	_GLGSFVVGV_					0	0	0		ENST00000425389.2_1_7:150070026-150070173:+|nuORF	ENST00000425389.2_1_7:150070026-150070173:+|nuORF	ENST00000425389.2_1_7:150070026-150070173:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	834.4756957888603	1	834.47198	833.464704	2.1309	0.0017782	0.30302	0.00025286	2.4339	0.002031	834.4722976135423	60.994	0.31306	61.324	61.203	61.516	0.32974					15	9	2	0	0	0	0.22519	1	25610	25610		30.225	3.3412	1	751950			7824	6463	3782	3803	9658	9658					0.04131014840049829
GLGVTLISNYV	11	Unmodified	_GLGVTLISNYV_					0	0	0		tr|A0A7D7A4H6|A0A7D7A4H6_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03160PE=3SV=1	tr|A0A7D7A4H6|A0A7D7A4H6_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03160PE=3SV=1	tr|A0A7D7A4H6|A0A7D7A4H6_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03160PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.3230468630791	2	568.321514	1134.62847	1.6964	0.00096408	-0.0041774	-2.3741E-06	1.6922	0.0009617	568.3215163498562	51.276	0.15669	51.276	51.167	51.323	0					7	4	2	0	0	0	0.85967	1	21393	21393		12.241	0.74595	1	492100			7825	17288	3783	3804	9659	9659					0.06654567820260127
GLHAQCPQL	9	Unmodified	_GLHAQCPQL_					0	0	0			REV__ENSG00000243627|ENST00000450895|SMIM34	REV__ENSG00000243627|ENST00000450895|SMIM34	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.7465698122978	2	483.744919	965.475285	2.6603	0.0012869	0.48218	0.00023325	3.1425	0.0015202	483.7455074478234	87.717	0.44772	87.717	87.49	87.938	0					60	14	7	0	0	0	0.44535	1	36676	36676		18.135	3.5533	1	10327000	+		7826	11933	3784	3805	9660	9660					-0.008833257771925673
GLHAQCPQL	9	Unmodified	_GLHAQCPQL_					0	0	0			REV__ENSG00000243627|ENST00000450895|SMIM34	REV__ENSG00000243627|ENST00000450895|SMIM34	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	483.744919	965.475285	3.5155	0.0017006	1.1254	0.00054439	4.6409	0.002245	483.745149691799	86.423	0.20638	87.55	87.487	87.694	1.1265	-0.052673	0.00032334	NaN	18.135	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2995300	+		7827	11933	3784	3805							-0.008833257771925673
GLHFCFCF	8	Unmodified	_GLHFCFCF_					0	0	0		ENST00000503562.1_1_4:24541566-24543501:-|nuORF	ENST00000503562.1_1_4:24541566-24543501:-|nuORF	ENST00000503562.1_1_4:24541566-24543501:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2085449099541	2	487.206584	972.398615	1.9002	0.00092578	1.1948	0.00058213	3.095	0.0015079	487.2068028222001	67.172	0.89201	68.56	68.215	69.107	1.3888					55	28	2	0	0	0	0.88409	1	28102	28102		6.3541	0	1	2510100			7828	6987	3785	3806	9661	9661					-0.08868840598017869
GLHFCFCF	8	Unmodified	_GLHFCFCF_					0	0	0		ENST00000503562.1_1_4:24541566-24543501:-|nuORF	ENST00000503562.1_1_4:24541566-24543501:-|nuORF	ENST00000503562.1_1_4:24541566-24543501:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2070190310478	2	487.206584	972.398615	1.442	0.00070255	1.0182	0.0004961	2.4602	0.0011986	487.2065940005841	66.622	0.7707	68.511	68.278	69.048	1.8889					46	24	2	0	0	0	0.88409	1	28050	28050		6.3541	0	1	3037200			7829	6987	3785	3806	9662	9662					-0.08868840598017869
GLHGWAFTL	9	Unmodified	_GLHGWAFTL_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2633544802666	2	501.263802	1000.51305	2.1129	0.0010591	-1.4622	-0.00073296	0.65069	0.00032617	501.26240990389607	66.189	0.42138	67.578	67.329	67.751	1.3888					39	13	4	0	0	0	0.070759	3	27755	27713;27755;27795		59.795	19.347	1	11510000			7830	3983	3786	3807	9663;9664;9665	9664					0.012815084799399301
GLHGWAFTL	9	Unmodified	_GLHGWAFTL_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2632629275322	2	501.263802	1000.51305	1.5067	0.00075526	-0.9796	-0.00049104	0.5271	0.00026422	501.2622479161596	65.666	0.42264	67.575	67.376	67.799	1.9085					37	13	4	0	0	0	0.070759	2	27550	27503;27550		59.795	21.644	1	11133000			7831	3983	3786	3807	9666;9667	9667					0.012815084799399301
GLHSFSNF	8	Unmodified	_GLHSFSNF_					0	0	0			REV__PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	REV__PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.7174255251884	2	454.716685	907.418816	2.8043	0.0012752	-0.4918	-0.00022363	2.3125	0.0010515	454.716141445759	73.248	0.54039	73.573	73.308	73.849	0.32494					45	17	3	0	0	0	0.8909	1	30681	30681		2.0598	2.0598	1	23866000	+		7832	14597	3787	3808	9668	9668					-0.03859630342185483
GLIDEIYGI	9	Unmodified	_GLIDEIYGI_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122734385-122734640:-|nuORF;ENST00000542790.1_1_12:122734385-122735751:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	992.5320922732353	1	992.529889	991.522613	1.981	0.0019662	0.51743	0.00051356	2.4984	0.0024798	992.5312695789643	81.324	0.24237	81.324	81.226	81.469	0					11	7	2	0	0	0	0.087207	1	33854	33854		53.576	9.1686	1	854560			7833	2890	3788	3809	9669	9669					0.026512319748235313
GLIDEIYGI	9	Unmodified	_GLIDEIYGI_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122734385-122734640:-|nuORF;ENST00000542790.1_1_12:122734385-122735751:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	992.5313598513603	1	992.529889	991.522613	2.1497	0.0021336	-1.4832	-0.0014721	0.66649	0.00066151	992.5290106336857	80.985	0.27931	81.275	81.121	81.4	0.29056					12	8	2	0	0	0	0.22519	1	33833	33833		30.225	1.738	1	796510			7834	2890	3788	3809	9670	9670					0.026512319748235313
GLIDEIYGI	9	Unmodified	_GLIDEIYGI_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122734385-122734640:-|nuORF;ENST00000542790.1_1_12:122734385-122735751:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	992.5322143435478	1	992.529889	991.522613	4.0446	0.0040144	-0.75544	-0.0007498	3.2891	0.0032646	992.5282948654392	80.154	0.34357	81.406	81.232	81.575	1.2512					21	10	3	0	0	0	0.061246	2	33659	33616;33659		63.563	12.708	1	3281600			7835	2890	3788	3809	9671;9672	9672					0.026512319748235313
GLIDEIYGI	9	Unmodified	_GLIDEIYGI_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A;ENST00000544349.5_1_12:122734385-122734640:-|nuORF;ENST00000542790.1_1_12:122734385-122735751:-|nuORF	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7712585330009	2	496.768583	991.522613	2.6156	0.0012993	0.37495	0.00018626	2.9905	0.0014856	496.76871279937706	80.151	0.31226	81.402	81.232	81.544	1.2512					14	9	2	0	0	0	0.20838	1	33677	33677		32.117	12.678	1	1117200			7836	2890	3788	3809	9673	9673					0.026512319748235313
GLIDFAIQL	9	Unmodified	_GLIDFAIQL_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant;ENST00000462984.1_1_X:70346235-70347318:+|nuORF;MED12L|p.R1007Vfs*12|1|0.32|ENSG00000144893|chr3:151365144-151365145|-/GTCTG|frameshift_variant;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000184634|Q93074-3|MED12;nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	989.5696899294853	1	989.566609	988.559333	3.7545	0.0037153	0.91905	0.00090946	4.6735	0.0046248	989.5676193588471	94.27	0.22557	95.459	95.302	95.527	1.1887					9	6	2	0	0	0	0.12174	1	39622	39622		42.095	6.0504	1	743540			7837	4700;3097	3789	3810	9674	9674					0.0645952859136969
GLIDFAIQL	9	Unmodified	_GLIDFAIQL_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant;ENST00000462984.1_1_X:70346235-70347318:+|nuORF;MED12L|p.R1007Vfs*12|1|0.32|ENSG00000144893|chr3:151365144-151365145|-/GTCTG|frameshift_variant;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000184634|Q93074-3|MED12;nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2885925173759	2	495.286943	988.559333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.217	1	95.406	94.906	95.906	1.1887								0	0	0	0.24103	1	39639	39639		23.148	1.4018	1				7838	4700;3097	3789	3810	9675	9675					0.0645952859136969
GLIDFAIQL	9	Unmodified	_GLIDFAIQL_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant;ENST00000462984.1_1_X:70346235-70347318:+|nuORF;MED12L|p.R1007Vfs*12|1|0.32|ENSG00000144893|chr3:151365144-151365145|-/GTCTG|frameshift_variant;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000184634|Q93074-3|MED12;nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2900573611259	2	495.286943	988.559333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.349	1	95.538	95.038	96.038	1.1887								0	0	0	0.30487	1	39693	39693		18.135	1.1927	1				7839	4700;3097	3789	3810	9676	9676					0.0645952859136969
GLIDGVVEA	9	Unmodified	_GLIDGVVEA_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	872.4738036990166	1	872.472374	871.465098	1.4709	0.0012834	0.99794	0.00087068	2.4689	0.002154	872.4727644973638	50.73	0.27129	52.124	51.955	52.226	1.3938					13	8	2	0	0	0	0.10294	1	21215	21215		48.346	0	1	1527900			7840	1478	3790	3811	9677	9677					0.024223897692309038
GLIDGVVEA	9	Unmodified	_GLIDGVVEA_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	872.4761840701103	1	872.472374	871.465098	1.4162	0.0012356	1.0564	0.00092165	2.4726	0.0021573	872.4736650370726	50.206	0.29921	52.183	52.039	52.338	1.9772					14	9	2	0	0	0	0.076627	1	21049	21049		57.471	0	1	1179000			7841	1478	3790	3811	9678	9678					0.024223897692309038
GLIDSLVHYV	10	Unmodified	_GLIDSLVHYV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3093749880791	2	558.308406	1114.60226	1.4769	0.00082457	1.2771	0.00071303	2.754	0.0015376	558.3086516369077	81.305	0.36565	81.305	81.133	81.498	0					29	11	4	0	0	0	0.25611	2	33834	33834;33892		42.095	18.074	1	3188300			7842	727	3791	3812	9679;9680	9679					0.04954298648794975
GLIDSLVHYV	10	Unmodified	_GLIDSLVHYV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3092529177666	2	558.308406	1114.60226	1.9065	0.0010644	0.80975	0.00045209	2.7162	0.0015165	558.3087328848991	80.814	0.40501	81.104	80.933	81.338	0.29056					30	12	4	0	0	0	0.20516	2	33767	33767;33819		48.346	19.264	1	2851000			7843	727	3791	3812	9681;9682	9681					0.04954298648794975
GLIDSLVHYV	10	Unmodified	_GLIDSLVHYV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3105346560478	2	558.308406	1114.60226	2.696	0.0015052	0.9081	0.000507	3.6041	0.0020122	558.3086835833299	79.925	0.49615	81.176	80.987	81.483	1.2512					41	15	4	0	0	0	0.052125	2	33520	33520;33569		77.984	41.857	1	5091600			7844	727	3791	3812	9683;9684	9683					0.04954298648794975
GLIDSLVHYV	10	Unmodified	_GLIDSLVHYV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3095580935478	2	558.308406	1114.60226	1.6329	0.00091168	0.98338	0.00054903	2.6163	0.0014607	558.3088721678455	79.434	0.46172	81.151	80.921	81.383	1.7167					36	14	4	0	0	0	0.062633	2	33332	33285;33332		97.075	53.216	1	4525300			7845	727	3791	3812	9685;9686	9686					0.04954298648794975
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8408386111259	2	506.841885	1011.66922	2.0807	0.0010546	-2.1836	-0.0011068	-0.10292	-5.2163E-05	506.8407600910082	57.298	0.74689	57.298	57.07	57.817	0					57	27	3	0	0	0	0.0049178	4	23910	23865;23910;23951;23998		122.18	50.257	1	12142000			7846	1500	3792	3813	9687;9688;9689;9690	9688					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2302734255791	3	338.230349	1011.66922	-1.461	-0.00049417	0.44612	0.00015089	-1.0149	-0.00034328	338.2306182186145	57.305	0.77578	57.305	57.009	57.785	0					60	28	3	0	0	0	0.10473	3	23880	23880;23918;23961		37.075	7.6878	1	14703000			7847	1500	3792	3813	9691;9692;9693	9691					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2318298220634	3	338.230349	1011.66922	1.7393	0.00058827	2.3857	0.00080691	4.125	0.0013952	338.2312169613883	56.774	0.47966	57.096	56.845	57.325	0.32103					52	16	4	0	0	0	0.1388	3	23770	23770;23820;23867		30.703	11.559	1	15705000			7848	1500	3792	3813	9694;9695;9696	9694					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.8436462283134	2	506.841885	1011.66922	2.5559	0.0012955	0.88522	0.00044866	3.4411	0.0017441	506.84227526436865	56.775	0.47966	57.096	56.845	57.325	0.32103					47	16	4	0	0	0	0.0080158	2	23785	23785;23836		110.67	38.752	1	12312000			7849	1500	3792	3813	9697;9698	9697					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2312499880791	3	338.230349	1011.66922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.021	1	57.342	56.842	57.842	0.32103								0	0	0	0.31526	1	23911	23911		12.175	5.9829	1				7850	1500	3792	3813	9699	9699					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2299682497978	3	338.230349	1011.66922	-0.23509	-7.9516E-05	0.35486	0.00012003	0.11977	4.051E-05	338.2304166295711	55.518	0.72429	56.928	56.504	57.228	1.4099					64	29	4	0	0	0	0.079895	3	23320	23221;23272;23320		43.982	9.8323	1	28855000			7851	1500	3792	3813	9700;9701;9702	9702					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8430053591728	2	506.841885	1011.66922	1.3056	0.00066175	-0.81933	-0.00041527	0.48631	0.00024648	506.84156531399503	55.513	0.50935	56.923	56.675	57.184	1.4099					56	20	4	0	0	0	0.0017491	4	23223	23223;23273;23315;23363		131.27	49.377	1	20727000			7852	1500	3792	3813	9703;9704;9705;9706	9703					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2317077517509	3	338.230349	1011.66922	-0.051863	-1.7542E-05	1.2309	0.00041633	1.1791	0.00039879	338.23077313549123	55.033	0.53852	57.001	56.695	57.233	1.9684					61	21	4	0	0	0	0.12251	4	22998	22998;23048;23101;23144		32.037	14.595	1	21344000			7853	1500	3792	3813	9707;9708;9709;9710	9707					0.16384953930571555
GLIEILKKV	9	Unmodified	_GLIEILKKV_					0	0	0		ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	ENSG00000105185|ENST00000590247|PDCD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8423034548759	2	506.841885	1011.66922	0.52094	0.00026404	0.82934	0.00042034	1.3503	0.00068438	506.8423328444731	54.964	0.468	56.933	56.751	57.219	1.9684					48	18	4	0	0	0	8.9999E-05	3	23088	23038;23088;23135		147.06	54.568	1	14369000			7854	1500	3792	3813	9711;9712;9713	9712					0.16384953930571555
GLIEKNIEL	9	Unmodified	_GLIEKNIEL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant;DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.8037597537041	2	514.802957	1027.59136	2.1271	0.001095	0.18864	9.7112E-05	2.3157	0.0011921	514.8027747956656	45.404	0.34332	45.404	45.219	45.562	0					26	10	3	0	0	0	0.0022704	2	19009	18960;19009		129.77	10.713	1	5473200			7855	2463	3793	3814	9714;9715	9715					0.0786689627452688
GLIEKNIEL	9	Unmodified	_GLIEKNIEL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant;DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8044311404228	2	514.802957	1027.59136	1.9234	0.00099017	1.1356	0.00058458	3.0589	0.0015748	514.8033384354393	44.82	0.35885	45.147	44.952	45.311	0.32674					28	11	3	0	0	0	0.0011269	2	18828	18778;18828		133.05	25.865	1	5732100			7856	2463	3793	3814	9716;9717	9717					0.0786689627452688
GLIEKNIEL	9	Unmodified	_GLIEKNIEL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant;DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8030883669853	2	514.802957	1027.59136	2.0348	0.0010475	-2.3431	-0.0012062	-0.30826	-0.00015869	514.8017707683778	43.368	0.32651	44.721	44.529	44.855	1.3536					25	10	3	0	0	0	0.00013275	2	18185	18140;18185		145.13	33.843	1	14601000			7857	2463	3793	3814	9718;9719	9719					0.0786689627452688
GLIEKNIEL	9	Unmodified	_GLIEKNIEL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant;DNMT1|p.Q503Rfs*25|1|0.04|ENSG00000130816|chr19:10154994-10154994|G/-|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8035766482353	2	514.802957	1027.59136	2.1158	0.0010892	-1.6293	-0.00083877	0.48649	0.00025045	514.8020388722068	42.736	0.30293	44.658	44.478	44.781	1.9211					28	9	4	0	0	0	0.0022704	2	17908	17863;17908		129.77	18.485	1	13608000			7858	2463	3793	3814	9720;9721	9721					0.0786689627452688
GLIFATIAI	9	Unmodified	_GLIFATIAI_					0	0	0		tr|A0A7D7A106|A0A7D7A106_9CLOTUracilpermeaseOS=ClostridiumintestinaleOX=36845GN=uraAPE=3SV=1	tr|A0A7D7A106|A0A7D7A106_9CLOTUracilpermeaseOS=ClostridiumintestinaleOX=36845GN=uraAPE=3SV=1	tr|A0A7D7A106|A0A7D7A106_9CLOTUracilpermeaseOS=ClostridiumintestinaleOX=36845GN=uraAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5637084841728	1	918.565881	917.558604	4.034	0.0037055	-2.9843	-0.0027413	1.0497	0.00096419	918.5631482913199	91.786	0.42603	92.722	92.529	92.955	0.93623					22	13	2	0	0	0	0.13437	1	38604	38604		40.449	2.2974	1	3178800			7859	17228	3794	3815	9722	9722					0.09652733942323266
GLIIALGTI	9	Unmodified	_GLIIALGTI_					0	0	0		ENSG00000148483|ENST00000377495|TMEM236	ENSG00000148483|ENST00000377495|TMEM236	ENSG00000148483|ENST00000377495|TMEM236	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	870.5673705935478	1	870.565881	869.558604	2.6826	0.0023354	0.084513	7.3574E-05	2.7671	0.002409	870.566149907751	90.673	0.28943	90.882	90.74	91.03	0.20904					12	8	2	0	0	0	0.20838	1	38002	38002		32.117	0	1	564940			7860	3213	3795	3816	9723	9723					0.11860733942353363
GLIMFLKTI	9	Unmodified	_GLIMFLKTI_					0	0	0			REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	518.3182250857353	2	518.317189	1034.61982	1.8468	0.00095721	0.11184	5.7966E-05	1.9586	0.0010152	518.3170602366773	78.785	0.86269	79.095	78.832	79.695	0.30933					65	27	3	0	0	0	0.087207	1	32999	32999		53.576	2.7205	1	14528000	+		7861	15454	3796	3817	9724	9724					0.10389922650119843
GLIMFLKTI	9	Unmodified	_GLIMFLKTI_					0	0	0			REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3179199099541	2	518.317189	1034.61982	2.6638	0.0013807	0.65477	0.00033938	3.3185	0.0017201	518.3176131956362	77.749	1.5071	79.03	78.791	80.299	1.2809					89	48	2	0	0	0	0.11478	1	32778	32778		44.407	2.3125	1	56267000	+		7862	15454	3796	3817	9725	9725					0.10389922650119843
GLISGILRV	9	Unmodified	_GLISGILRV_					0	0	0		ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.3039428591728	2	464.302927	926.591301	2.2483	0.0010439	-0.023385	-1.0858E-05	2.2249	0.001033	464.30286506895675	64.135	0.31752	64.135	63.952	64.27	0					16	9	2	0	0	0	0.079895	1	26729	26729		56.177	0	1	1288400			7863	2139	3797	3818	9726	9726					0.125069410651804
GLISGILRV	9	Unmodified	_GLISGILRV_					0	0	0		ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.3039428591728	2	464.302927	926.591301	2.5702	0.0011933	-0.62076	-0.00028822	1.9494	0.00090511	464.30246842611393	63.494	0.30727	63.823	63.661	63.968	0.32899					14	9	2	0	0	0	0.098163	1	26609	26609		49.933	0	1	1282200			7864	2139	3797	3818	9727	9727					0.125069410651804
GLISGILRV	9	Unmodified	_GLISGILRV_					0	0	0		ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.3050720095634	2	464.302927	926.591301	3.079	0.0014296	1.2108	0.00056218	4.2898	0.0019918	464.3035902844305	62.218	0.31988	63.636	63.459	63.779	1.4177					23	9	3	0	0	0	0.037761	2	26080	26080;26121		78.149	0	1	4287000			7865	2139	3797	3818	9728;9729	9728					0.125069410651804
GLISGILRV	9	Unmodified	_GLISGILRV_					0	0	0		ENSG00000121749|ENST00000485960|TBC1D15;nc|ENSG00000121749|Q8TC07-3|TBC1D15;nc|ENSG00000121749|Q8TC07|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	ENSG00000121749|ENST00000485960|TBC1D15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.3048889040947	2	464.302927	926.591301	2.7551	0.0012792	1.543	0.00071642	4.2981	0.0019956	464.3037505953451	61.597	0.31866	63.554	63.4	63.719	1.9571					22	9	3	0	0	0	0.049839	1	25887	25887		68.081	0	1	2847900			7866	2139	3797	3818	9730	9730					0.125069410651804
GLITSWWDRAK	11	Unmodified	_GLITSWWDRAK_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-6|BBS9	REV__nc|ENSG00000122507|Q3SYG4-6|BBS9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	666.7831298708916	2	666.856586	1331.69862	0.50576	0.00033727	-3.1059	-0.0020712	-2.6001	-0.0017339	666.854377804387	27.9	0.21767	29.675	29.51	29.727	1.7754					12	6	3	0	0	0	0.14337	1	11647	11647		20.415	8.1739	1	909810	+		7867	9609	3798	3819	9731	9731					0.04603866208731233
GLITSWWDRAK	11	Unmodified	_GLITSWWDRAK_					0	0	0			REV__nc|ENSG00000122507|Q3SYG4-6|BBS9	REV__nc|ENSG00000122507|Q3SYG4-6|BBS9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	666.856586	1331.69862	0.79956	0.00053319	-5.5264	-0.0036853	-4.7268	-0.0031521	666.852299790007	28.391	0.18395	29.67	29.576	29.76	1.2789	-0.0023493	-0.0018355	NaN	20.415	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	637210	+		7868	9609	3798	3819							0.04603866208731233
GLKKLILLPI	10	Unmodified	_GLKKLILLPI_					0	0	0			REV__ENST00000590156.5_1_18:43671730-43674948:-|nuORF	REV__ENST00000590156.5_1_18:43671730-43674948:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	369.5987426638603	3	369.933644	1106.7791	2.1661	0.00080131	-2.3722	-0.00087755	-0.2061	-7.6242E-05	369.93304249683894	101.24	0.091324	101.41	101.36	101.45	0.17032					6	2	3	0	0	0	0.12561	1	42602	42602		0.15932	0.15932	1	7628300	+		7869	14063	3799	3820	9732	9732					0.22998379269756697
GLKQTRAR	8	Unmodified	_GLKQTRAR_					0	0	0			REV__tr|A0A553SF88|A0A553SF88_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08460PE=3SV=1	REV__tr|A0A553SF88|A0A553SF88_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08460PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2864257693291	2	465.2856	928.556647	1.5669	0.00072906	1.1587	0.00053911	2.7256	0.0012682	465.2858669506745	70.616	0.42434	72.454	72.228	72.653	1.8378					33	13	3	0	0	0	0.88846	1	29628	29628		3.5965	1.2938	1	7021000	+		7870	14695	3800	3821	9733	9733					0.08951117977073864
GLKRLSPRWRE	11	Unmodified	_GLKRLSPRWRE_					0	0	0		ENST00000356674.7_2_7:26237309-26240268:-|nuORF	ENST00000356674.7_2_7:26237309-26240268:-|nuORF	ENST00000356674.7_2_7:26237309-26240268:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6100341677666	3	466.608993	1396.80515	3.2842	0.0015324	-2.2502	-0.00105	1.0339	0.00048245	466.6077737302514	87.191	1.6586	87.434	87.17	88.829	0.24387					94	55	3	0	0	0	1.0131	1	36635	36635		1.2148	0	1	5112000			7871	5990	3801	3822	9734	9734					0.122620414938865
GLKTPLMWL	9	Unmodified	_GLKTPLMWL_					0	0	0			REV__ENST00000580755.1_1_17:27050626-27050918:+|nuORF	REV__ENST00000580755.1_1_17:27050626-27050918:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8077880740166	2	529.806988	1057.59942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.397	1	75.722	75.222	76.222	0.32464								0	0	0	0.26021	1	31532	31532		21.747	0	1		+		7872	13998	3802	3823	9735	9735					0.07292751990280522
GLKVRIMGP	9	Unmodified	_GLKVRIMGP_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2012512087822	3	324.200395	969.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.119	1	24.362	23.862	24.862	0.24251								0	0	0	0.42693	1	10060	10060		0.26902	0	1				7873	3983	3803	3824	9736	9736					0.09335001050351366
GLLAGYLIY	9	Unmodified	_GLLAGYLIY_					0	0	0			REV__MYO3B|p.C956Sfs*48|1|0.03|ENSG00000071909|chr2:170466564-170466564|G/-|frameshift_variant	REV__MYO3B|p.C956Sfs*48|1|0.03|ENSG00000071909|chr2:170466564-170466564|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5670654177666	1	982.560795	981.553519	3.8716	0.0038041	3.1462	0.0030913	7.0178	0.0068954	982.5621159443963	113.27	0.097115	113.44	113.39	113.49	0.16914					4	2	2	0	0	0	0.39097	1	49123	49123		20.871	6.2895	1	1019900	+		7874	8728	3804	3825	9737	9737					0.06200430079718444
GLLAVRRHLV	10	Unmodified	_GLLAVRRHLV_					0	0	0			REV__ENST00000568339.5_1_16:85838717-85838885:+|nuORF	REV__ENST00000568339.5_1_16:85838717-85838885:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5793945193291	3	378.580375	1132.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.297	1	31.587	31.087	32.087	0.29086								0	0	0	0.66166	1	13136	13136		0.69767	0	1		+		7875	13948	3805	3826	9738	9738					0.1582450137905198
GLLDGVFNV	9	Unmodified	_GLLDGVFNV_					0	0	0		nc|ENSG00000172508|A5YM72-2|CARNS1;nc|ENSG00000172508|A5YM72|CARNS1;nc|ENSG00000172508|A5YM72-4|CARNS1;ENSG00000172508|ENST00000687366|CARNS1;nc|ENSG00000172508|A5YM72-3|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	933.5052978396416	1	933.504009	932.496732	2.4503	0.0022874	-0.89631	-0.00083671	1.554	0.0014507	933.5034791276074	85.412	0.37575	85.412	85.196	85.572	0					22	11	3	0	0	0	0.076627	2	35565	35565;35618		57.471	19.32	1	1667300			7876	4241	3806	3827	9739;9740	9739					0.02778382523183609
GLLDGVFNV	9	Unmodified	_GLLDGVFNV_					0	0	0		nc|ENSG00000172508|A5YM72-2|CARNS1;nc|ENSG00000172508|A5YM72|CARNS1;nc|ENSG00000172508|A5YM72-4|CARNS1;ENSG00000172508|ENST00000687366|CARNS1;nc|ENSG00000172508|A5YM72-3|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	933.5049926638603	1	933.504009	932.496732	2.6054	0.0024322	-0.091767	-8.5665E-05	2.5137	0.0023465	933.5041828954314	85.043	0.34737	85.303	85.109	85.457	0.26083					24	10	3	0	0	0	0.09539	2	35525	35525;35570		50.855	23.971	1	1673900			7877	4241	3806	3827	9741;9742	9741					0.02778382523183609
GLLDGVFNV	9	Unmodified	_GLLDGVFNV_					0	0	0		nc|ENSG00000172508|A5YM72-2|CARNS1;nc|ENSG00000172508|A5YM72|CARNS1;nc|ENSG00000172508|A5YM72-4|CARNS1;ENSG00000172508|ENST00000687366|CARNS1;nc|ENSG00000172508|A5YM72-3|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5056640505791	1	933.504009	932.496732	1.9728	0.0018416	-0.32158	-0.00030019	1.6512	0.0015414	933.5027503912446	84.238	0.33879	85.397	85.251	85.589	1.159					14	10	2	0	0	0	0.045797	2	35357	35357;35400		71.134	25.113	1	4871600			7878	4241	3806	3827	9743;9744	9743					0.02778382523183609
GLLDGVFNV	9	Unmodified	_GLLDGVFNV_					0	0	0		nc|ENSG00000172508|A5YM72-2|CARNS1;nc|ENSG00000172508|A5YM72|CARNS1;nc|ENSG00000172508|A5YM72-4|CARNS1;ENSG00000172508|ENST00000687366|CARNS1;nc|ENSG00000172508|A5YM72-3|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	nc|ENSG00000172508|A5YM72-2|CARNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	933.5088378787041	1	933.504009	932.496732	2.0797	0.0019414	-0.1229	-0.00011473	1.9568	0.0018267	933.5027128378761	83.867	0.27554	85.505	85.347	85.623	1.6379					14	8	2	0	0	0	0.045797	2	35180	35142;35180		71.134	32.982	1	4675200			7879	4241	3806	3827	9745;9746	9746					0.02778382523183609
GLLDLPFRV	9	Unmodified	_GLLDLPFRV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3093749880791	2	515.30821	1028.60187	3.1676	0.0016323	-1.8188	-0.00093723	1.3489	0.00069507	515.3073488811829	80.922	0.39246	82.155	81.923	82.316	1.2332					19	12	2	0	0	0	0.12251	1	33989	33989		41.84	9.5341	1	2008700			7880	1358	3807	3828	9747	9747					0.08870923719587154
GLLDLPFRV	9	Unmodified	_GLLDLPFRV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3093749880791	2	515.30821	1028.60187	1.8387	0.00094751	-1.8946	-0.00097628	-0.055841	-2.8775E-05	515.3074968129072	80.483	0.29892	82.2	82.025	82.324	1.7167					21	9	3	0	0	0	0.12251	1	33779	33779		41.84	7.7372	1	1751300			7881	1358	3807	3828	9748	9748					0.08870923719587154
GLLDLPFRV	9	Unmodified	_GLLDLPFRV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	515.30821	1028.60187	2.2812	0.0011755	-1.2204	-0.00062886	1.0609	0.00054668	515.307997378242	81.887	0.21474	82.167	82.029	82.244	0.2802	-0.0071304	0.00039375	NaN	41.84	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	889180			7882	1358	3807	3828							0.08870923719587154
GLLDMNKGLSL	11	Unmodified	_GLLDMNKGLSL_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	580.8215820193291	2	580.820824	1159.62709	1.7202	0.00099915	-0.014395	-8.3609E-06	1.7058	0.00099079	580.8205183969377	66.263	0.19353	66.263	66.156	66.35	0					12	5	3	0	0	0	0.87205	1	27591	27591		11.495	1.4208	1	380230			7883	2008	3808	3829	9749	9749					0.053666104598733
GLLDMNKGLSL	11	Unmodified	_GLLDMNKGLSL_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.8237792849541	2	580.820824	1159.62709	1.8167	0.0010552	1.5418	0.0008955	3.3585	0.0019507	580.8214817005143	65.788	0.25114	66.113	65.99	66.241	0.32583					12	7	2	0	0	0	0.34699	1	27562	27562		28.495	8.0409	1	413330			7884	2008	3808	3829	9750	9750					0.053666104598733
GLLDMNKGLSL	11	Unmodified	_GLLDMNKGLSL_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8250610232353	2	580.820824	1159.62709	3.0503	0.0017717	2.7863	0.0016184	5.8366	0.00339	580.8223962326122	64.577	0.27427	65.984	65.865	66.139	1.4071					13	8	3	0	0	0	0.12391	1	27077	27077		51.488	11.249	1	1587500			7885	2008	3808	3829	9751	9751					0.053666104598733
GLLDMNKGLSL	11	Unmodified	_GLLDMNKGLSL_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8239623904228	2	580.820824	1159.62709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.122	1	66.05	65.55	66.55	1.928								0	0	0	0.1562	1	26902	26902		42.312	14.684	1				7886	2008	3808	3829	9752	9752					0.053666104598733
GLLDPKLCYL	10	Unmodified	_GLLDPKLCYL_					0	0	0		ENST00000483825.5_1_1:167404074-167487702:-|nuORF;ENST00000479979.1_1_1:167409855-167487702:-|nuORF;nc|ENSG00000198821|P20963-3|CD247;ENSG00000198821|ENST00000362089|CD247	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8164550662041	2	567.81501	1133.61547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.574	1	56.983	56.483	57.483	1.4099								0	0	0	0.64435	1	23284	23284		19.257	3.4098	1				7887	6846	3809	3830	9753	9753					0.05400413436541385
GLLDSEWIPV	10	Unmodified	_GLLDSEWIPV_					0	0	0		AMIGO2|p.N439Kfs*24|1|0.45|ENSG00000139211|chr12:47077686-47077687|-/AAGTCTATTTTTAAAGGACACTAATACATAAAGT|frameshift_variant;ENSG00000139211|ENST00000550413|AMIGO2	AMIGO2|p.N439Kfs*24|1|0.45|ENSG00000139211|chr12:47077686-47077687|-/AAGTCTATTTTTAAAGGACACTAATACATAAAGT|frameshift_variant	AMIGO2|p.N439Kfs*24|1|0.45|ENSG00000139211|chr12:47077686-47077687|-/AAGTCTATTTTTAAAGGACACTAATACATAAAGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8035766482353	2	564.800414	1127.58628	1.9511	0.001102	1.8986	0.0010723	3.8497	0.0021743	564.8015786655096	38.784	0.33155	40.081	39.895	40.226	1.2961					23	10	3	0	0	0	0.62746	1	16241	16241		21.747	0.20967	1	2398700			7888	60	3810	3831	9754	9754					0.02758592411896643
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5617553591728	1	972.561189	971.553913	2.5388	0.0024691	-1.149	-0.0011175	1.3898	0.0013516	972.560677451719	85.785	0.3419	85.785	85.572	85.914	0					18	10	2	0	0	0	0.046276	2	35744	35697;35744		70.716	0	1	1155600			7889	5162	3811	3832	9755;9756	9756					0.06699805008906878
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7844116091728	2	486.784233	971.553913	2.5544	0.0012435	-0.62566	-0.00030456	1.9288	0.0009389	486.7836414637707	85.774	0.40565	85.774	85.572	85.978	0					26	12	3	0	0	0	0.1735	1	35705	35705		36.044	9.7029	1	4269100			7890	5162	3811	3832	9757	9757					0.06699805008906878
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7830993533134	2	486.784233	971.553913	3.3034	0.0016081	-2.2022	-0.001072	1.1013	0.00053607	486.7829099793809	85.299	0.4026	85.551	85.323	85.726	0.25227					25	12	3	0	0	0	0.11478	2	35653	35653;35701		44.407	4.4497	1	2050100			7891	5162	3811	3832	9758;9759	9758					0.06699805008906878
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7858154177666	2	486.784233	971.553913	1.9108	0.00093014	1.0439	0.00050815	2.9547	0.0014383	486.7846716594498	84.48	0.4711	85.639	85.402	85.874	1.159					25	14	2	0	0	0	0.01705	2	35450	35450;35490		101.72	18.301	1	10686000			7892	5162	3811	3832	9760;9761	9760					0.06699805008906878
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7852355837822	2	486.784233	971.553913	1.9932	0.00097024	-0.10386	-5.0559E-05	1.8893	0.00091968	486.78410773276886	84	0.39546	85.638	85.444	85.84	1.6379					21	12	2	0	0	0	0.01705	2	35245	35198;35245		101.72	28.069	1	8854300			7893	5162	3811	3832	9762;9763	9763					0.06699805008906878
GLLEELVTV	9	Unmodified	_GLLEELVTV_					0	0	0		ENST00000533210.5_1_8:144649355-144650416:-|nuORF;ENSG00000204839|ENST00000398882|MROH6	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	ENST00000533210.5_1_8:144649355-144650416:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	972.561189	971.553913	2.5863	0.0025153	-0.25592	-0.0002489	2.3304	0.0022664	972.5605767988875	85.304	0.37265	85.557	85.416	85.789	0.25227	-0.11427	0.00052853	NaN	70.716	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1714200			7894	5162	3811	3832							0.06699805008906878
GLLEGLVEV	9	Unmodified	_GLLEGLVEV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	928.5370361208916	1	928.534975	927.527698	1.7457	0.0016209	1.4525	0.0013487	3.1982	0.0029697	928.5350945693943	78.93	0.24261	79.239	79.136	79.379	0.30933					12	7	2	0	0	0	0.042029	1	33014	33014		74.423	3.7072	1	1016300			7895	3772	3812	3833	9764	9764					0.06103535837428353
GLLEGLVEV	9	Unmodified	_GLLEGLVEV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.5363647341728	1	928.534975	927.527698	2.6963	0.0025036	-0.75931	-0.00070505	1.937	0.0017986	928.5339878844514	78.041	0.41881	79.322	79.108	79.527	1.2809					31	13	3	0	0	0	0.018723	1	32753	32753		100.37	10.945	1	5334800			7896	3772	3812	3833	9765	9765					0.06103535837428353
GLLEGLVEV	9	Unmodified	_GLLEGLVEV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.5363647341728	1	928.534975	927.527698	1.3676	0.0012698	-0.80059	-0.00074337	0.56697	0.00052645	928.5340410277554	77.554	0.36221	79.305	79.105	79.467	1.7514					21	11	3	0	0	0	0.026628	1	32496	32496		92.822	10.958	1	6873700			7897	3772	3812	3833	9766	9766					0.06103535837428353
GLLEGLVEV	9	Unmodified	_GLLEGLVEV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	928.534975	927.527698	1.6662	0.0015471	0.80868	0.00075089	2.4749	0.002298	928.5352902125571	79.398	0.34226	79.398	79.267	79.609	0	0.082016	0.00090807	NaN	100.37	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	773780			7898	3772	3812	3833							0.06103535837428353
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7792541384697	2	465.778951	929.543348	2.5537	0.0011895	-0.75116	-0.00034988	1.8025	0.00083958	465.7781926605775	82.999	0.42797	82.999	82.8	83.228	0					33	13	3	0	0	0	0.03795	3	34637	34541;34585;34637		77.984	29.638	1	7314200			7899	535	3813	3834	9767;9768;9769	9769					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.5523559451103	1	930.550625	929.543348	2.1364	0.001988	-1.5829	-0.0014729	0.55354	0.00051509	930.5494970189022	83.038	0.39733	83.038	82.861	83.258	0					19	12	2	0	0	0	0.12174	1	34560	34560		42.095	6.0504	1	1562400			7900	535	3813	3834	9770	9770					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7800170779228	2	465.778951	929.543348	2.9175	0.0013589	-0.3776	-0.00017588	2.5399	0.0011831	465.7784219797232	82.642	0.45697	82.922	82.674	83.131	0.2802					33	14	3	0	0	0	0.069258	2	34556	34509;34556		60.39	2.9182	1	6243100			7901	535	3813	3834	9771;9772	9772					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7801391482353	2	465.778951	929.543348	3.796	0.0017681	-0.73881	-0.00034412	3.0572	0.001424	465.7783898202812	81.655	0.80576	82.889	82.626	83.432	1.2332					57	25	4	0	0	0	0.01705	4	34270	34223;34270;34310;34368		101.72	21.427	1	13614000			7902	535	3813	3834	9773;9774;9775;9776	9774					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	930.5529052615166	1	930.550625	929.543348	3.8443	0.0035773	-1.2648	-0.001177	2.5794	0.0024003	930.5491477103212	81.667	0.5883	82.9	82.687	83.275	1.2332					32	18	3	0	0	0	0.051699	2	34283	34240;34283		67.344	9.8725	1	5227300			7903	535	3813	3834	9777;9778	9778					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7803222537041	2	465.778951	929.543348	3.4992	0.0016299	-0.097313	-4.5326E-05	3.4019	0.0015845	465.7787321683004	81.242	0.52333	82.938	82.703	83.226	1.6959					48	16	4	0	0	0	0.046276	4	34059	34021;34059;34098;34150		70.716	24.345	1	20297000			7904	535	3813	3834	9779;9780;9781;9782	9780					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.5548583865166	1	930.550625	929.543348	3.3886	0.0031532	0.27141	0.00025256	3.66	0.0034058	930.5512444363246	81.242	0.43107	82.938	82.735	83.166	1.6959					22	13	2	0	0	0	0.042029	2	34100	34051;34100		74.423	11.45	1	5617500			7905	535	3813	3834	9783;9784	9784					0.07575822354488082
GLLEIVTSV	9	Unmodified	_GLLEIVTSV_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	930.550625	929.543348	2.2793	0.002121	-0.56294	-0.00052384	1.7163	0.0015971	930.5494549792984	82.591	0.33469	82.871	82.704	83.039	0.2802	-0.065377	9.6468E-05	NaN	74.423	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2034300			7906	535	3813	3834							0.07575822354488082
GLLENIRQL	9	Unmodified	_GLLENIRQL_					0	0	0		ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A;ENSG00000131437|ENST00000403231|KIF3A	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3158447146416	2	528.314023	1054.61349	1.9687	0.0010401	0.019956	1.0543E-05	1.9886	0.0010506	528.3139642637506	56.309	0.25483	56.309	56.173	56.427	0					13	8	2	0	0	0	0.031377	1	23464	23464		85.272	33.004	1	1498500			7907	2492	3814	3835	9785	9785					0.08837120742941806
GLLENIRQL	9	Unmodified	_GLLENIRQL_					0	0	0		ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A;ENSG00000131437|ENST00000403231|KIF3A	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8154785037041	2	528.314023	1054.61349	2.271	0.0011998	-0.26861	-0.00014191	2.0024	0.0010579	528.3140276734259	55.809	0.23578	56.13	55.988	56.223	0.32088					13	7	2	0	0	0	0.098163	1	23337	23337		49.933	17.628	1	1021700			7908	2492	3814	3835	9786	9786					0.08837120742941806
GLLENIRQL	9	Unmodified	_GLLENIRQL_					0	0	0		ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A;ENSG00000131437|ENST00000403231|KIF3A	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3159667849541	2	528.314023	1054.61349	1.7825	0.0009417	0.6169	0.00032592	2.3994	0.0012676	528.3142925856392	54.072	0.34592	56.041	55.877	56.223	1.9684					14	10	2	0	0	0	0.04145	1	22655	22655		74.929	12.356	1	1786500			7909	2492	3814	3835	9787	9787					0.08837120742941806
GLLENIRQL	9	Unmodified	_GLLENIRQL_					0	0	0		ENST00000487055.1_1_5:132036305-132039285:-|nuORF;nc|ENSG00000131437|Q9Y496|KIF3A;ENSG00000131437|ENST00000403231|KIF3A	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	ENST00000487055.1_1_5:132036305-132039285:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	528.314023	1054.61349	1.6776	0.00088631	3.8721	0.0020457	5.5498	0.002932	528.3146559905198	54.595	0.3174	56	55.835	56.152	1.4048	-0.12001	0.0038229	NaN	85.272	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2482100			7910	2492	3814	3835							0.08837120742941806
GLLERVKEL	9	Unmodified	_GLLERVKEL_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP;ENST00000487169.5_1_2:242169444-242174670:-|nuORF	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8248168826103	2	528.824224	1055.63389	1.8311	0.00096833	1.0531	0.00055688	2.8842	0.0015252	528.8243096683696	40.43	0.37404	40.743	40.602	40.976	0.31263					16	11	2	0	0	0	0.056421	1	17006	17006		65.474	11.641	1	1101500			7911	1932	3815	3836	9788	9788					0.10830291402771763
GLLFRRLS	8	Unmodified	_GLLFRRLS_					0	0	0		ENSG00000010319|ENST00000231721|SEMA3G;SEMA3G|p.V722Kfs*11|1|0.31|ENSG00000010319|chr3:52435789-52435790|-/AAGTCGGTCAGGTAGGCTCTTCTTA|frameshift_variant;SEMA3G|p.D709Tfs*52|1|0.19|ENSG00000010319|chr3:52435827-52435827|C/-|frameshift_variant	ENSG00000010319|ENST00000231721|SEMA3G	ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.3024169802666	2	481.300719	960.586885	0.77086	0.00037101	1.0623	0.00051128	1.8331	0.00088229	481.30113390984224	70.836	0.32962	72.673	72.503	72.832	1.8378					19	10	2	0	0	0	0.87803	1	29727	29727		10.183	0	1	1865000			7912	551	3816	3837	9789	9789					0.10501476642286889
GLLGGVIMMV	10	Unmodified	_GLLGGVIMMV_					0	0	0		ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2829467654228	2	495.279749	988.544945	4.1718	0.0020662	-0.80042	-0.00039643	3.3713	0.0016698	495.2798684659653	93.1	0.35883	93.972	93.769	94.128	0.87176					22	10	3	0	0	0	0.70643	1	39175	39175		18.135	4.6271	1	609830			7913	1786	3817	3838	9790	9790					0.05021416847228011
GLLGNVAEV	9	Unmodified	_GLLGNVAEV_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	871.4895507693291	1	871.488359	870.481082	1.5389	0.0013412	-0.48628	-0.00042378	1.0527	0.00091739	871.487743728703	54.721	0.34143	56.126	55.899	56.24	1.4048					22	10	3	0	0	0	0.03795	2	22873	22873;22926		77.984	13.748	1	3243000			7914	3560	3818	3839	9791;9792	9791					0.04066096006135922
GLLGNVAEV	9	Unmodified	_GLLGNVAEV_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.2485534548759	2	436.247818	870.481082	1.8245	0.00079593	0.073054	3.1869E-05	1.8975	0.0008278	436.2479857800724	54.67	0.4049	56.075	55.867	56.272	1.4048					19	12	2	0	0	0	0.15478	1	22887	22887		38.151	6.0342	1	3314200			7915	3560	3818	3839	9793	9793					0.04066096006135922
GLLGNVAEV	9	Unmodified	_GLLGNVAEV_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.2493774294853	2	436.247818	870.481082	1.9849	0.0008659	1.3736	0.00059925	3.3585	0.0014652	436.2486870873497	54.209	0.49672	56.177	55.97	56.467	1.9684					23	15	2	0	0	0	0.11478	2	22742	22689;22742		44.407	3.8835	1	2614800			7916	3560	3818	3839	9794;9795	9795					0.04066096006135922
GLLGNVAEV	9	Unmodified	_GLLGNVAEV_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	871.4914428591728	1	871.488359	870.481082	1.7875	0.0015578	0.23487	0.00020468	2.0224	0.0017625	871.488394895229	54.209	0.31644	56.177	56.001	56.318	1.9684					15	9	2	0	0	0	0.031324	2	22693	22693;22741		85.357	22.37	1	2793500			7917	3560	3818	3839	9796;9797	9796					0.04066096006135922
GLLGNVAEV	9	Unmodified	_GLLGNVAEV_					0	0	0		ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	ENSG00000160445|ENST00000291900|ZER1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	436.247818	870.481082	2.555	0.0011146	1.118	0.00048774	3.6731	0.0016024	436.24865330613824	55.926	0.1986	56.247	56.109	56.307	0.32088	0.080556	0.00050041	NaN	44.407	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1130700			7918	3560	3818	3839							0.04066096006135922
GLLGTLVQL	9	Unmodified	_GLLGTLVQL_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	457.2914611697197	2	457.289485	912.564418	3.2001	0.0014634	0.071612	3.2747E-05	3.2717	0.0014961	457.28940892099257	87.271	0.39568	87.514	87.314	87.71	0.24387					41	13	4	0	0	0	0.02596	1	36622	36622		93.883	4.4566	1	15924000			7919	4010	3819	3840	9798	9798					0.10463832454001931
GLLGYLHFV	9	Unmodified	_GLLGYLHFV_					0	0	0		ENSG00000100564|ENST00000216452|PIGH;PIGH-AFTPH|2|fusion;PIGH-AFTPH|1|fusion;PIGH-AFTPH|3|fusion	ENSG00000100564|ENST00000216452|PIGH	ENSG00000100564|ENST00000216452|PIGH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7904235720634	2	509.789653	1017.56475	1.9845	0.0010117	-1.4678	-0.00074826	0.51674	0.00026343	509.7889656768584	79.076	0.29977	79.076	78.907	79.206	0					17	9	2	0	0	0	0.11074	2	32902	32902;32955		45.75	24.879	1	1594500			7920	1287	3820	3841	9799;9800	9799					0.056672521738505566
GLLGYLHFV	9	Unmodified	_GLLGYLHFV_					0	0	0		ENSG00000100564|ENST00000216452|PIGH;PIGH-AFTPH|2|fusion;PIGH-AFTPH|1|fusion;PIGH-AFTPH|3|fusion	ENSG00000100564|ENST00000216452|PIGH	ENSG00000100564|ENST00000216452|PIGH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.7899658083916	2	509.789653	1017.56475	1.9323	0.00098508	-0.09368	-4.7757E-05	1.8386	0.00093732	509.7896506994519	78.444	0.3157	78.754	78.61	78.925	0.30933					15	9	2	0	0	0	0.16975	2	32779	32779;32831		36.466	17.027	1	1587500			7921	1287	3820	3841	9801;9802	9801					0.056672521738505566
GLLGYLHFV	9	Unmodified	_GLLGYLHFV_					0	0	0		ENSG00000100564|ENST00000216452|PIGH;PIGH-AFTPH|2|fusion;PIGH-AFTPH|1|fusion;PIGH-AFTPH|3|fusion	ENSG00000100564|ENST00000216452|PIGH	ENSG00000100564|ENST00000216452|PIGH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7910949587822	2	509.789653	1017.56475	2.8393	0.0014475	-0.41395	-0.00021103	2.4254	0.0012364	509.7899611631063	77.459	0.41137	78.74	78.538	78.95	1.2809					30	12	3	0	0	0	0.08022	2	32480	32480;32532		56.048	25.823	1	4134100			7922	1287	3820	3841	9803;9804	9803					0.056672521738505566
GLLGYLHFV	9	Unmodified	_GLLGYLHFV_					0	0	0		ENSG00000100564|ENST00000216452|PIGH;PIGH-AFTPH|2|fusion;PIGH-AFTPH|1|fusion;PIGH-AFTPH|3|fusion	ENSG00000100564|ENST00000216452|PIGH	ENSG00000100564|ENST00000216452|PIGH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7905456423759	2	509.789653	1017.56475	2.2157	0.0011295	0.058104	2.9621E-05	2.2738	0.0011592	509.79013554430867	76.824	0.57488	78.592	78.45	79.025	1.7672					37	17	3	0	0	0	0.051525	2	32210	32210;32255		67.413	23.555	1	4768600			7923	1287	3820	3841	9805;9806	9805					0.056672521738505566
GLLHLIKTAL	10	Unmodified	_GLLHLIKTAL_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2414123415947	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.249	1	95.372	94.872	95.872	0.12331								0	0	0	0.66218	1	39858	39858		0.77653	0.14971	1		+		7924	10559	3821	3842	9807	9807					0.15527758679127146
GLLHLIKTAL	10	Unmodified	_GLLHLIKTAL_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2386962771416	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.412	1	93.738	93.238	94.238	1.3269								0	0	0	0.66218	1	38899	38899		0.77653	0.14971	1		+		7925	10559	3821	3842	9808	9808					0.15527758679127146
GLLHLTLLL	9	Unmodified	_GLLHLTLLL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.8301574587822	2	496.828778	991.643003	1.9879	0.00098765	0.36177	0.00017974	2.3497	0.0011674	496.8288516960835	84.68	0.43165	85.839	85.655	86.086	1.159					22	13	2	0	0	0	0.078975	1	35499	35499		56.541	9.6204	1	1475800			7926	699	3822	3843	9809	9809					0.14684684759083666
GLLHLTLLL	9	Unmodified	_GLLHLTLLL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	496.828778	991.643003	3.1978	0.0015887	0.47763	0.0002373	3.6754	0.001826	496.8291279065108	85.607	0.40407	85.859	85.726	86.13	0.25227	0.03583	-0.00018562	NaN	56.541	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	505040			7927	699	3822	3843							0.14684684759083666
GLLHLTLLL	9	Unmodified	_GLLHLTLLL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	496.828778	991.643003	2.064	0.0010254	1.0498	0.00052158	3.1138	0.001547	496.82937204191785	84.133	0.42141	85.771	85.623	86.044	1.6379	-0.051801	0.00038294	NaN	56.541	15	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1461700			7928	699	3822	3843							0.14684684759083666
GLLIGTTGV	9	Unmodified	_GLLIGTTGV_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	830.9042846560478	1	830.498195	829.490919	1.8811	0.0015623	-0.85025	-0.00070613	1.0308	0.00085612	830.4977778257346	57.186	0.21248	57.186	57.041	57.253	0					12	6	2	0	0	0	0.040432	1	23835	23835		50.855	0	1	1043900			7929	4158	3823	3844	9810	9810					0.06935284011524345
GLLIGTTGV	9	Unmodified	_GLLIGTTGV_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	830.5018188357353	1	830.498195	829.490919	2.2665	0.0018823	1.8434	0.0015309	4.1099	0.0034133	830.4999883917869	56.757	0.2689	57.078	56.931	57.2	0.32103					14	8	2	0	0	0	0.04206	1	23792	23792		74.396	3.6808	1	1122200			7930	4158	3823	3844	9811	9811					0.06935284011524345
GLLIGTTGV	9	Unmodified	_GLLIGTTGV_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	830.498195	829.490919	0.79828	0.00066297	-1.5257	-0.0012671	-0.72739	-0.0006041	830.4976425447109	55.522	0.17289	56.932	56.793	56.966	1.4099	-0.12128	-0.0023173	NaN	50.855	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1529900			7931	4158	3823	3844							0.06935284011524345
GLLIGTTGV	9	Unmodified	_GLLIGTTGV_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	830.498195	829.490919	0.21251	0.00017649	2.5199	0.0020928	2.7324	0.0022692	830.5002785826207	55.049	0.23373	57.018	56.871	57.105	1.9684	-0.035925	0.0010426	NaN	50.855	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1354600			7932	4158	3823	3844							0.06935284011524345
GLLKVVFVV	9	Unmodified	_GLLKVVFVV_					0	0	0		ENST00000479810.6_1_21:42692883-42718146:+|nuORF;ENSG00000183844|ENST00000357985|FAM3B;nc|ENSG00000183844|P58499-2|FAM3B;BACE2-FAM3B|3|fusion;BACE2-FAM3B|4|fusion	ENST00000479810.6_1_21:42692883-42718146:+|nuORF	ENST00000479810.6_1_21:42692883-42718146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3270751833916	2	487.325871	972.637189	3.5739	0.0017416	-0.38129	-0.00018581	3.1926	0.0015558	487.3255590899212	73.265	0.72125	74.595	74.288	75.009	1.3297					40	22	2	0	0	0	0.24063	1	30741	30741		28.487	13.905	1	666510			7933	100	3824	3845	9812	9812					0.14977586247425734
GLLKVVFVV	9	Unmodified	_GLLKVVFVV_					0	0	0		ENST00000479810.6_1_21:42692883-42718146:+|nuORF;ENSG00000183844|ENST00000357985|FAM3B;nc|ENSG00000183844|P58499-2|FAM3B;BACE2-FAM3B|3|fusion;BACE2-FAM3B|4|fusion	ENST00000479810.6_1_21:42692883-42718146:+|nuORF	ENST00000479810.6_1_21:42692883-42718146:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.325871	972.637189	2.6612	0.0012969	-0.33457	-0.00016304	2.3266	0.0011338	487.32576130839857	72.713	0.72524	74.523	74.167	74.893	1.8101	-0.035696	2.2278E-05	NaN	28.487	37	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	611530			7934	100	3824	3845							0.14977586247425734
GLLLLHLELKR	11	Unmodified	_GLLLLHLELKR_					0	0	0		ENST00000534138.1_1_19:50311551-50312077:-|nuORF;ENST00000525370.5_1_19:50310410-50314932:-|nuORF;nc|ENSG00000010361|Q9BT04-3|FUZ;nc|ENSG00000010361|Q9BT04-2|FUZ;ENSG00000010361|ENST00000313777|FUZ	ENST00000534138.1_1_19:50311551-50312077:-|nuORF	ENST00000534138.1_1_19:50311551-50312077:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.0084716677666	4	326.965774	1303.83399	-1.7939	-0.00058655	-0.91503	-0.00029918	-2.7089	-0.00088573	326.96570341283996	52.442	0.34637	52.442	52.255	52.602	0					12	10	2	0	0	0	0.14606	1	21824	21824		0.094841	0	1	734200			7935	554	3825	3846	9813	9813					0.19422766070351827
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	910.5260497927666	1	910.52441	909.517133	1.6723	0.0015226	-0.021512	-1.9587E-05	1.6507	0.001503	910.5245422373105	79.687	0.52798	79.687	79.359	79.887	0					37	16	3	0	0	0	0.022807	3	33200	33100;33145;33200		97.075	19.09	1	3870500			7936	2264	3826	3847	9814;9815;9816	9816					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.5284301638603	1	910.52441	909.517133	1.7913	0.001631	0.73942	0.00067326	2.5307	0.0023043	910.5246236051892	79.168	0.50041	79.468	79.217	79.718	0.30046					37	15	3	0	0	0	0.031324	1	33055	33055		85.357	7.3724	1	4005700			7937	2264	3826	3847	9817	9817					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	910.5251342654228	1	910.52441	909.517133	2.2322	0.0020324	-0.41036	-0.00037364	1.8218	0.0016588	910.5239500676283	78.22	0.57126	79.487	79.184	79.755	1.2668					46	18	3	0	0	0	0.013238	2	32816	32816;32912		104.8	19.442	1	8799000			7938	2264	3826	3847	9818;9819	9818					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7669250369072	2	455.765843	909.517133	2.7905	0.0012718	-1.0078	-0.00045934	1.7826	0.00081246	455.76538827433683	78.167	0.41948	79.448	79.289	79.709	1.2809					24	13	2	0	0	0	0.046276	1	32887	32887		70.716	26.309	1	1627600			7939	2264	3826	3847	9820	9820					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	910.5267822146416	1	910.52441	909.517133	1.3061	0.0011892	-0.35221	-0.0003207	0.95389	0.00086854	910.5244982087246	77.779	0.51602	79.531	79.261	79.777	1.7514					38	16	3	0	0	0	0.006164	3	32642	32544;32592;32642		117.6	15.015	1	9192300			7940	2264	3826	3847	9821;9822;9823	9823					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.7665283083916	2	455.765843	909.517133	1.6738	0.00076287	-0.7424	-0.00033836	0.93143	0.00042451	455.765513791405	77.75	0.45468	79.501	79.261	79.716	1.7514					26	14	2	0	0	0	0.09539	1	32626	32626		50.855	14.811	1	1580100			7941	2264	3826	3847	9824	9824					0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	455.765843	909.517133	1.8291	0.00083363	-0.77301	-0.00035231	1.0561	0.00048131	455.7656991029311	79.748	0.3726	79.748	79.453	79.826	0	0.19064	-6.9011E-05	NaN	70.716	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	691250			7942	2264	3826	3847							0.05875553183000193
GLLPDVPSL	9	Unmodified	_GLLPDVPSL_					0	0	0		nc|ENSG00000125505|Q96N66-3|MBOAT7;nc|ENSG00000125505|Q96N66-2|MBOAT7;ENSG00000125505|ENST00000245615|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	nc|ENSG00000125505|Q96N66-3|MBOAT7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	455.765843	909.517133	2.3252	0.0010598	-0.2179	-9.9312E-05	2.1073	0.00096045	455.76601254925663	79.232	0.31243	79.532	79.31	79.623	0.30046	-0.025336	0.00043699	NaN	70.716	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	868150			7943	2264	3826	3847							0.05875553183000193
GLLQKQKEL	9	Unmodified	_GLLQKQKEL_					0	0	0		nc|ENSG00000180376|A2RUB6-3|CCDC66;ENSG00000180376|ENST00000394672|CCDC66	nc|ENSG00000180376|A2RUB6-3|CCDC66	nc|ENSG00000180376|A2RUB6-3|CCDC66	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	528.2490722537041	2	528.824224	1055.63389	1.8091	0.00095671	-0.33672	-0.00017806	1.4724	0.00077865	528.8240956036768	41.012	0.31657	41.012	40.859	41.176	0					16	9	2	0	0	0	0.080611	1	17165	17165		34.402	0	1	674930			7944	4546	3827	3848	9825	9825					0.10830291402771763
GLLSALENV	9	Unmodified	_GLLSALENV_					0	0	0		ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	ENSG00000188822|ENST00000374472|CNR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2615844607353	2	458.260925	914.507297	3.36	0.0015397	1.0635	0.00048736	4.4235	0.0020271	458.26117479241805	85.106	1.1491	86.703	86.341	87.491	1.5962					144	46	4	0	0	0	0.22519	1	36095	36095		30.225	0	1	73803000			7945	4879	3828	3849	9826	9826					0.04662365177625816
GLLSIFTKV	9	Unmodified	_GLLSIFTKV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;THADA|p.I470Dfs*6|2|0.05|ENSG00000115970|chr2:43574657-43574658|-/C|frameshift_variant;nc|ENSG00000115970|Q6YHU6-6|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.3059875369072	2	489.305136	976.595718	1.7348	0.00084884	-0.50083	-0.00024506	1.234	0.00060379	489.30499577011466	75.472	0.3814	75.472	75.279	75.66	0					28	11	3	0	0	0	0.037098	2	31442	31391;31442		78.728	27.873	1	3239300			7946	1943	3829	3850	9827;9828	9828					0.10648405488097978
GLLSIFTKV	9	Unmodified	_GLLSIFTKV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;THADA|p.I470Dfs*6|2|0.05|ENSG00000115970|chr2:43574657-43574658|-/C|frameshift_variant;nc|ENSG00000115970|Q6YHU6-6|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3063232302666	2	489.305136	976.595718	3.3002	0.0016148	-1.0205	-0.00049933	2.2797	0.0011155	489.3046366736262	74.886	0.40381	75.211	74.958	75.361	0.32464					30	12	3	0	0	0	0.04812	1	31332	31332		69.105	23.084	1	4019700			7947	1943	3829	3850	9829	9829					0.10648405488097978
GLLSIFTKV	9	Unmodified	_GLLSIFTKV_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;THADA|p.I470Dfs*6|2|0.05|ENSG00000115970|chr2:43574657-43574658|-/C|frameshift_variant;nc|ENSG00000115970|Q6YHU6-6|THADA;nc|ENSG00000115970|Q6YHU6-5|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.3076660037041	2	489.305136	976.595718	3.5693	0.0017465	3.3	0.0016147	6.8692	0.0033612	489.3065103545676	73.729	0.40681	75.047	74.841	75.248	1.318					31	12	4	0	0	0	0.04812	2	30896	30896;30943		69.105	18.25	1	6127000			7948	1943	3829	3850	9830;9831	9830					0.10648405488097978
GLLTGDVQL	9	Unmodified	_GLLTGDVQL_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;SKIV2L|p.K777Lfs*25|1|0.48|ENSG00000204351|chr6:31966833-31966834|-/ACTTCTGGGCTCAAGCAGTCTGTCTGCCTCAGCTT|frameshift_variant;ENST00000465703.5_1_6:31929724-31930734:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2625610232353	2	458.260925	914.507297	4.0692	0.0018647	1.5454	0.00070819	5.6145	0.0025729	458.26133246265863	86.024	0.31844	87.571	87.371	87.69	1.547					29	12	3	0	0	0	0.3154	1	36156	36156		24.674	5.2349	1	80625000			7949	5135	3830	3851	9832	9832					0.04662365177614447
GLLTGDVQL	9	Unmodified	_GLLTGDVQL_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;SKIV2L|p.K777Lfs*25|1|0.48|ENSG00000204351|chr6:31966833-31966834|-/ACTTCTGGGCTCAAGCAGTCTGTCTGCCTCAGCTT|frameshift_variant;ENST00000465703.5_1_6:31929724-31930734:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	458.260925	914.507297	3.568	0.0016351	1.266	0.00058017	4.8341	0.0022153	458.2611050683286	86.398	0.54626	87.525	87.147	87.694	1.1265	-0.023379	-0.00016177	NaN	24.674	49	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68529000			7950	5135	3830	3851							0.04662365177614447
GLLTRKAYAF	10	Unmodified	_GLLTRKAYAF_					0	0	0			REV__nc|ENSG00000100031|P19440-2|GGT1	REV__nc|ENSG00000100031|P19440-2|GGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.5571166872978	3	380.557236	1138.64988	0.051164	1.9471E-05	0.11808	4.4936E-05	0.16924	6.4407E-05	380.5573472204203	51.666	0.39768	53.062	52.839	53.237	1.3966					21	13	2	0	0	0	0.88508	1	21601	21601		3.0723	0.78949	1	2688100	+		7951	8962	3831	3852	9833	9833					0.08609997639632638
GLLWQIIKV	9	Unmodified	_GLLWQIIKV_					0	0	0		ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1603271365166	2	535.342052	1068.66955	1.9908	0.0010658	-0.18629	-9.9728E-05	1.8046	0.00096605	535.341990521121	81.706	0.35776	81.706	81.527	81.885	0					17	11	2	0	0	0	0.11812	1	33998	33998		2.0598	0	1	661360			7952	2116	3832	3853	9834	9834					0.13796373650416172
GLLWQIIKV	9	Unmodified	_GLLWQIIKV_					0	0	0		ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.3427001833916	2	535.342052	1068.66955	2.7545	0.0014746	-0.17496	-9.3665E-05	2.5795	0.0013809	535.3419289775742	80.043	0.68167	81.294	81.078	81.76	1.2512					46	21	3	0	0	0	0.029093	2	33572	33572;33622		88.904	27.546	1	2740900			7953	2116	3832	3853	9835;9836	9835					0.13796373650416172
GLLWQIIKV	9	Unmodified	_GLLWQIIKV_					0	0	0		ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	ENSG00000120756|ENST00000457734|PLS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.3434326052666	2	535.342052	1068.66955	1.8019	0.00096465	0.28587	0.00015304	2.0878	0.0011177	535.342347538075	79.528	0.55477	81.245	80.982	81.537	1.7167					40	17	3	0	0	0	0.045797	1	33360	33360		71.134	20.279	1	2142800			7954	2116	3832	3853	9837	9837					0.13796373650416172
GLMEDLLKL	9	Unmodified	_GLMEDLLKL_					0	0	0		ENST00000420969.1_1_2:162360026-162361742:-|nuORF;ENST00000470300.5_1_1:247027247-247061635:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.2932617068291	2	516.293911	1030.57327	2.5298	0.0013061	-4.3221	-0.0022315	-1.7923	-0.00092533	516.2928233533157	83.602	0.49361	83.602	83.258	83.752	0					29	15	3	0	0	0	0.12251	1	34871	34871		41.84	16.44	1	1824400			7955	3350	3833	3854	9838	9838					0.05920438028147146
GLMEDLLKL	9	Unmodified	_GLMEDLLKL_					0	0	0		ENST00000420969.1_1_2:162360026-162361742:-|nuORF;ENST00000470300.5_1_1:247027247-247061635:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2955810427666	2	516.293911	1030.57327	4.0857	0.0021094	-1.2148	-0.00062718	2.8709	0.0014822	516.2931835133608	82.238	0.97755	83.45	83.038	84.015	1.2125					76	30	5	0	0	0	0.019432	2	34531	34531;34570		99.799	46.47	1	7844800			7956	3350	3833	3854	9839;9840	9839					0.05920438028147146
GLMEDLLKL	9	Unmodified	_GLMEDLLKL_					0	0	0		ENST00000420969.1_1_2:162360026-162361742:-|nuORF;ENST00000470300.5_1_1:247027247-247061635:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2959472537041	2	516.293911	1030.57327	4.1457	0.0021404	-1.7935	-0.00092596	2.3522	0.0012144	516.2927210138109	81.75	1.217	83.446	82.953	84.17	1.6959					79	38	4	0	0	0	0.019432	3	34294	34294;34332;34371		99.799	31.718	1	6780200			7957	3350	3833	3854	9841;9842;9843	9841					0.05920438028147146
GLMEDLLKL	9	Unmodified	_GLMEDLLKL_					0	0	0		ENST00000420969.1_1_2:162360026-162361742:-|nuORF;ENST00000470300.5_1_1:247027247-247061635:-|nuORF;ENSG00000153207|ENST00000648844|AHCTF1;nc|ENSG00000153207|Q8WYP5-3|AHCTF1;nc|ENSG00000153207|Q8WYP5-2|AHCTF1	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	ENST00000420969.1_1_2:162360026-162361742:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.293911	1030.57327	2.4788	0.0012798	-1.1395	-0.00058831	1.3394	0.0006915	516.2931251564545	83.145	0.49496	83.415	83.275	83.77	0.27029	-0.063286	0.0004079	NaN	99.799	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2506900			7958	3350	3833	3854							0.05920438028147146
GLNEFVVKF	9	Unmodified	_GLNEFVVKF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H;ENST00000496698.5_1_7:129519475-129591134:-|nuORF;nc|ENSG00000186591|P62256-2|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.7924072146416	2	526.792392	1051.57023	2.1123	0.0011128	-0.34508	-0.00018179	1.7672	0.00093097	526.7918089916274	63.888	0.18096	63.888	63.832	64.013	0					7	5	2	0	0	0	0.39927	1	26657	26657		20.454	8.8133	1	421960			7959	4798	3834	3855	9844	9844					0.046509309656585174
GLNEFVVKF	9	Unmodified	_GLNEFVVKF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H;ENST00000496698.5_1_7:129519475-129591134:-|nuORF;nc|ENSG00000186591|P62256-2|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	526.7918578982353	2	526.792392	1051.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.379	1	63.708	63.208	64.208	0.32974								0	0	0	0.27791	1	26551	26551		20.454	8.8133	1				7960	4798	3834	3855	9845	9845					0.046509309656585174
GLNEFVVKF	9	Unmodified	_GLNEFVVKF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H;ENST00000496698.5_1_7:129519475-129591134:-|nuORF;nc|ENSG00000186591|P62256-2|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7955810427666	2	526.792392	1051.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.088	1	63.506	63.006	64.006	1.4177								0	0	0	0.045657	1	26037	26037		62.573	34.086	1				7961	4798	3834	3855	9846	9846					0.046509309656585174
GLNEFVVKF	9	Unmodified	_GLNEFVVKF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H;ENST00000496698.5_1_7:129519475-129591134:-|nuORF;nc|ENSG00000186591|P62256-2|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7937499880791	2	526.792392	1051.57023	2.4372	0.0012839	0.7112	0.00037465	3.1484	0.0016586	526.7927400510871	61.56	0.3527	63.517	63.305	63.657	1.9571					18	10	3	0	0	0	0.063746	1	25809	25809		62.573	34.086	1	2109100			7962	4798	3834	3855	9847	9847					0.046509309656585174
GLNESPPILL	10	Unmodified	_GLNESPPILL_					0	0	0			REV__ENSG00000116285|ENST00000377482|ERRFI1	REV__ENSG00000116285|ENST00000377482|ERRFI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.8045532107353	2	526.802957	1051.59136	2.0917	0.0011019	0.034384	1.8114E-05	2.1261	0.00112	526.8031145417989	65.791	0.25114	66.117	65.989	66.241	0.32552					12	7	2	0	0	0	0.70618	1	27535	27535		18.146	0.011366	1	473500	+		7963	9472	3835	3856	9848	9848					0.06762896274517516
GLNEVLVVT	9	Unmodified	_GLNEVLVVT_					0	0	0		tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2782775759697	2	472.276575	942.538597	2.639	0.0012463	-0.15195	-7.1764E-05	2.487	0.0011746	472.2765877284187	63.188	0.37591	63.518	63.318	63.694	0.32974					22	11	3	0	0	0	0.073578	1	26512	26512		58.679	0	1	2494800			7964	16540	3836	3857	9849	9849					0.06502938211713172
GLNEVLVVT	9	Unmodified	_GLNEVLVVT_					0	0	0		tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	tr|A0A553SR37|A0A553SR37_NIACIBifunctionalhomocysteineS-methyltransferase/methylenetetrahydrofolatereductaseOS=NialliacirculansOX=1397GN=CEQ21_00280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2781860232353	2	472.276575	942.538597	3.0252	0.0014287	-0.024703	-1.1667E-05	3.0005	0.0014171	472.27663054903593	62.123	0.44549	63.541	63.238	63.683	1.4177					30	13	3	0	0	0	0.04145	1	26031	26031		74.929	0	1	5536000			7965	16540	3836	3857	9850	9850					0.06502938211713172
GLPELVIQL	9	Unmodified	_GLPELVIQL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.3059265017509	2	491.302593	980.590633	4.9957	0.0024544	2.2155	0.0010885	7.2112	0.0035429	491.3031292813745	87.777	0.34838	88.869	88.704	89.052	1.0918					22	10	3	0	0	0	0.24063	1	37019	37019		28.487	6.7402	1	1270000			7966	633	3837	3858	9851	9851					0.09956101625471092
GLPELVIQL	9	Unmodified	_GLPELVIQL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3059265017509	2	491.302593	980.590633	4.7901	0.0023534	1.5991	0.00078563	6.3892	0.003139	491.3027852543147	87.367	0.3129	88.862	88.734	89.047	1.4953					20	9	3	0	0	0	0.19075	1	36832	36832		34.102	5.6156	1	1156900			7967	633	3837	3858	9852	9852					0.09956101625471092
GLPELVIQL	9	Unmodified	_GLPELVIQL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	491.302593	980.590633	2.2063	0.001084	1.1668	0.00057327	3.3732	0.0016573	491.3030436944224	89.099	0.22118	89.099	88.988	89.209	0	0.1758	-0.00037086	NaN	34.102	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593130			7968	633	3837	3858							0.09956101625471092
GLPELVIQL	9	Unmodified	_GLPELVIQL_					0	0	0		ENSG00000030066|ENST00000378460|NUP160;nc|ENSG00000030066|Q12769|NUP160	ENSG00000030066|ENST00000378460|NUP160	ENSG00000030066|ENST00000378460|NUP160	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	491.302593	980.590633	3.2994	0.001621	0.72028	0.00035388	4.0197	0.0019749	491.30261744931056	88.628	0.32426	88.863	88.723	89.047	0.23471	-0.060504	-0.00080964	NaN	34.102	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449470			7969	633	3837	3858							0.09956101625471092
GLPGFLASRSF	11	Unmodified	_GLPGFLASRSF_					0	0	0		tr|A0A553SQ49|A0A553SQ49_NIACIRibonucleaseZOS=NialliacirculansOX=1397GN=rnzPE=3SV=1	tr|A0A553SQ49|A0A553SQ49_NIACIRibonucleaseZOS=NialliacirculansOX=1397GN=rnzPE=3SV=1	tr|A0A553SQ49|A0A553SQ49_NIACIRibonucleaseZOS=NialliacirculansOX=1397GN=rnzPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3171264529228	2	576.314023	1150.61349	0.72433	0.00041744	-0.65359	-0.00037667	0.070744	4.0771E-05	576.3137583007139	19.844	0.40775	20.903	20.762	21.17	1.0585					28	12	3	0	0	0	0.96769	1	8249	8249		5.7319	0.97584	1	734050			7970	16500	3838	3859	9853	9853					0.04421120742927087
GLPKRMVL	8	Unmodified	_GLPKRMVL_					0	0	0		nc|ENSG00000165209|Q96SI9-2|STRBP;ENSG00000165209|ENST00000348403|STRBP	nc|ENSG00000165209|Q96SI9-2|STRBP	nc|ENSG00000165209|Q96SI9-2|STRBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	913.5674316287041	1	913.565169	912.557893	3.6145	0.0033021	1.8314	0.0016731	5.4459	0.0049752	913.5663570292894	85.865	0.33585	87.412	87.274	87.61	1.547					25	13	2	0	0	0	0.83518	1	36159	36159		18.135	2.3668	1	7858700			7971	3821	3839	3860	9854	9854					0.09811616021625014
GLQDFDLLRV	10	Unmodified	_GLQDFDLLRV_					0	0	0		ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.3254882693291	2	588.324588	1174.63462	1.906	0.0011214	1.2804	0.00075328	3.1864	0.0018746	588.3249106031345	73.132	0.37644	73.132	72.964	73.341	0					23	11	3	0	0	0	0.12602	1	30445	30445		59.368	0	1	1296300			7972	3699	3840	3861	9855	9855					0.05429086051799459
GLQDFDLLRV	10	Unmodified	_GLQDFDLLRV_					0	0	0		ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3266479372978	2	588.324588	1174.63462	1.8952	0.001115	-0.098353	-5.7863E-05	1.7968	0.0010571	588.3239833333995	72.596	0.31474	72.921	72.767	73.082	0.32494					23	9	3	0	0	0	0.078293	1	30403	30403		67.838	0	1	1692700			7973	3699	3840	3861	9856	9856					0.05429086051799459
GLQDFDLLRV	10	Unmodified	_GLQDFDLLRV_					0	0	0		ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	587.7356445193291	2	588.324588	1174.63462	1.9783	0.0011639	-2.9539	-0.0017378	-0.9756	-0.00057397	588.3224752781089	71.457	0.89713	72.798	72.601	73.498	1.3415					45	28	3	0	0	0	0.11927	1	29955	29955		41.956	0	1	4556000			7974	3699	3840	3861	9857	9857					0.05429086051799459
GLQDFDLLRV	10	Unmodified	_GLQDFDLLRV_					0	0	0		ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	ENSG00000163558|ENST00000295797|PRKCI	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	587.7354003787041	2	588.324588	1174.63462	1.094	0.00064363	-2.1631	-0.0012726	-1.0691	-0.00062898	588.3226377149741	71.01	0.74191	72.834	72.639	73.381	1.824					39	23	3	0	0	0	0.11433	1	29768	29768		40.239	0	1	5729300			7975	3699	3840	3861	9858	9858					0.05429086051799459
GLQHWVPEL	9	Unmodified	_GLQHWVPEL_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.7889892458916	2	539.787641	1077.56073	1.7826	0.00096222	0.83995	0.0004534	2.6226	0.0014156	539.7881287374996	58.027	0.67303	58.027	57.658	58.331	0					69	20	5	0	0	0	0.045797	5	24226	24150;24187;24226;24266;24307		71.134	35.007	1	9339500			7976	2924	3841	3862	9859;9860;9861;9862;9863	9861					0.02505162680131434
GLQHWVPEL	9	Unmodified	_GLQHWVPEL_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7889892458916	2	539.787641	1077.56073	2.3649	0.0012765	-0.16926	-9.1365E-05	2.1956	0.0011852	539.7874865227926	57.516	0.63527	57.839	57.474	58.109	0.32299					65	20	5	0	0	0	0.049839	5	24095	24014;24056;24095;24132;24173		68.081	30.107	1	10710000			7977	2924	3841	3862	9864;9865;9866;9867;9868	9866					0.02505162680131434
GLQHWVPEL	9	Unmodified	_GLQHWVPEL_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7875244021416	2	539.787641	1077.56073	0.53057	0.00028639	0.003088	1.6669E-06	0.53366	0.00028806	539.787694329345	56.292	0.66141	57.702	57.366	58.028	1.4099					91	26	5	0	0	0	0.04145	5	23560	23513;23560;23605;23644;23684		74.929	38.802	1	50840000			7978	2924	3841	3862	9869;9870;9871;9872;9873	9870					0.02505162680131434
GLQHWVPEL	9	Unmodified	_GLQHWVPEL_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;MFGE8-CRTC1|1|fusion;ENST00000559997.5_1_15:89448698-89456595:-|nuORF;ENST00000558352.5_1_15:89449802-89456595:-|nuORF	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7874023318291	2	539.787641	1077.56073	0.82633	0.00044604	-0.5866	-0.00031664	0.23973	0.0001294	539.7874416066375	55.725	0.5942	57.694	57.432	58.026	1.9684					86	23	5	0	0	0	0.049839	4	23364	23322;23364;23412;23451		68.081	31.954	1	38231000			7979	2924	3841	3862	9874;9875;9876;9877	9875					0.02505162680131434
GLQVLNVHF	9	Unmodified	_GLQVLNVHF_					0	0	0		ENSG00000002726|ENST00000360937|AOC1;nc|ENSG00000002726|P19801-2|AOC1	ENSG00000002726|ENST00000360937|AOC1	ENSG00000002726|ENST00000360937|AOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8632995486259	3	342.862548	1025.56581	0.24007	8.2312E-05	1.7267	0.00059204	1.9668	0.00067435	342.86305769898695	27.738	0.43248	29.514	29.295	29.727	1.7754					41	13	4	0	0	0	0.75101	1	11582	11582		5.2969	2.0156	1	7246900			7980	460	3842	3863	9878	9878					0.05405466542742943
GLRNEENS	8	Unmodified	_GLRNEENS_					0	0	0		ENST00000367806.7_1_1:169388269-169388332:-|nuORF	ENST00000367806.7_1_1:169388269-169388332:-|nuORF	ENST00000367806.7_1_1:169388269-169388332:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1716796755791	2	459.717413	917.420273	0.8996	0.00041356	2.8209	0.0012968	3.7205	0.0017104	459.7188995176275	25.623	0.15115	27.34	27.276	27.427	1.7167					7	4	2	0	0	0	2.3239	1	10695	10695		2.5775	0	1	332400			7981	6073	3843	3864	9879	9879					-0.04174041044097976
GLRQRRGL	8	Unmodified	_GLRQRRGL_					0	0	0		ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3020812869072	2	478.299042	954.583531	2.9804	0.0014255	2.9389	0.0014057	5.9193	0.0028312	478.30039045434154	59.81	0.36826	61.779	61.582	61.95	1.969					27	11	3	0	0	0	0.74212	1	25070	25070		26.341	0.94196	1	3803800			7982	5710	3844	3865	9880	9880					0.10442226588270387
GLSAGSYA	8	Unmodified	_GLSAGSYA_					0	0	0		ENSG00000174326|ENST00000574600|SLC16A11;nc|ENSG00000174326|Q8NCK7|SLC16A11	ENSG00000174326|ENST00000574600|SLC16A11	ENSG00000174326|ENST00000574600|SLC16A11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2543517947197	2	363.176861	724.339169	-1.1584	-0.00042072	-3.2923	-0.0011957	-4.4508	-0.0016164	363.1756798071571	97.569	0.15294	97.569	97.477	97.63	0					6	4	2	0	0	0	2.3239	1	40787	40787		0	0	1	499530			7983	4326	3845	3866	9881	9881					-0.03402697016201728
GLSARQRREL	10	Unmodified	_GLSARQRREL_					0	0	0		ENST00000588551.5_1_19:30097225-30101540:+|nuORF;ENST00000586136.5_1_19:30097284-30104129:+|nuORF;ENSG00000105171|ENST00000585603|POP4	ENST00000588551.5_1_19:30097225-30101540:+|nuORF	ENST00000588551.5_1_19:30097225-30101540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.3427612185478	2	593.344178	1184.6738	2.5153	0.0014924	-2.005	-0.0011897	0.51032	0.00030279	593.3422066770528	90.486	0.36383	90.486	90.288	90.651	0					26	11	3	0	0	0	0.87472	1	37812	37812		4.1895	0.24511	1	2821000			7984	1499	3846	3867	9882	9882					0.08885231126032522
GLSARQRREL	10	Unmodified	_GLSARQRREL_					0	0	0		ENST00000588551.5_1_19:30097225-30101540:+|nuORF;ENST00000586136.5_1_19:30097284-30104129:+|nuORF;ENSG00000105171|ENST00000585603|POP4	ENST00000588551.5_1_19:30097225-30101540:+|nuORF	ENST00000588551.5_1_19:30097225-30101540:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	593.344178	1184.6738	5.1266	0.0030418	-3.3191	-0.0019694	1.8075	0.0010725	593.3411388121305	89.659	0.21265	90.678	90.556	90.769	1.0199	0.11021	-0.0010249	NaN	4.1895	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	717550			7985	1499	3846	3867							0.08885231126032522
GLSDLRLEL	9	Unmodified	_GLSDLRLEL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;nc|ENSG00000131558|Q96A65-2|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4-TRUB2|1|fusion	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2936279177666	2	508.292756	1014.57096	2.1679	0.0011019	-0.54888	-0.00027899	1.619	0.00082292	508.2919581977428	64.254	0.57811	64.254	64.046	64.624	0					23	17	3	0	0	0	0.22861	1	26797	26797		29.841	7.1043	1	1068300			7986	2496	3847	3868	9883	9883					0.06425725614690236
GLSDLRLEL	9	Unmodified	_GLSDLRLEL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;nc|ENSG00000131558|Q96A65-2|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4-TRUB2|1|fusion	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2938720583916	2	508.292756	1014.57096	2.1518	0.0010938	0.35713	0.00018153	2.509	0.0012753	508.2924961852807	63.76	0.32974	64.089	63.912	64.241	0.32899					16	10	2	0	0	0	0.15456	1	26714	26714		38.176	3.7738	1	1089100			7987	2496	3847	3868	9884	9884					0.06425725614690236
GLSDLRLEL	9	Unmodified	_GLSDLRLEL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;nc|ENSG00000131558|Q96A65-2|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4-TRUB2|1|fusion	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2953674197197	2	508.292756	1014.57096	3.2759	0.0016651	2.8842	0.001466	6.1601	0.0031311	508.2953744548008	62.637	0.47756	64.05	63.807	64.284	1.4134					46	15	4	0	0	0	0.0060384	2	26217	26217;26269		118.07	25.577	1	6397800			7988	2496	3847	3868	9885;9886	9885					0.06425725614690236
GLSDLRLEL	9	Unmodified	_GLSDLRLEL_					0	0	0		ENSG00000131558|ENST00000253861|EXOC4;nc|ENSG00000131558|Q96A65-2|EXOC4;ENST00000462055.5_1_7:132937857-133164897:+|nuORF;ENST00000486013.5_1_7:132937857-133314895:+|nuORF;EXOC4-TRUB2|1|fusion	ENSG00000131558|ENST00000253861|EXOC4	ENSG00000131558|ENST00000253861|EXOC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2951843142509	2	508.292756	1014.57096	3.165	0.0016087	3.1766	0.0016147	6.3416	0.0032234	508.2961241498458	62.059	0.39253	64.016	63.815	64.208	1.9571					38	12	4	0	0	0	0.039278	2	25993	25993;26056		76.825	11.59	1	5357600			7989	2496	3847	3868	9887;9888	9887					0.06425725614690236
GLSEFTEYL	9	Unmodified	_GLSEFTEYL_					0	0	0		MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant;ENSG00000131711|ENST00000296755|MAP1B	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1058.503100574017	1	1058.50407	1057.49679	4.0054	0.0042398	-0.14478	-0.00015325	3.8606	0.0040865	1058.5034440123725	73.632	0.4404	74.95	74.685	75.125	1.318					20	13	2	0	0	0	0.09539	1	30910	30910		50.855	10.898	1	1315900			7990	2501	3848	3869	9889	9889					-0.02965662267456537
GLSEFTEYL	9	Unmodified	_GLSEFTEYL_					0	0	0		MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant;ENSG00000131711|ENST00000296755|MAP1B	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1058.50407	1057.49679	1.9195	0.0020318	-2.198	-0.0023266	-0.27851	-0.00029481	1058.4978327850451	75.043	0.18665	75.043	74.872	75.059	0	0.045063	-0.0005343	NaN	50.855	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	616440			7991	2501	3848	3869							-0.02965662267456537
GLSEFTEYL	9	Unmodified	_GLSEFTEYL_					0	0	0		MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant;ENSG00000131711|ENST00000296755|MAP1B	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1058.50407	1057.49679	3.3438	0.0035394	-2.4608	-0.0026048	0.88295	0.0009346	1058.4997817767837	73.191	0.28644	75.001	74.797	75.083	1.8101	0.0026724	-0.00081251	NaN	50.855	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1088800			7992	2501	3848	3869							-0.02965662267456537
GLSEPIFQL	9	Unmodified	_GLSEPIFQL_					0	0	0		ENSG00000171109|ENST00000471841|MFN1	ENSG00000171109|ENST00000471841|MFN1	ENSG00000171109|ENST00000471841|MFN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2770263552666	2	502.276575	1002.5386	1.794	0.00090107	-0.45571	-0.00022889	1.3383	0.00067218	502.27644432738504	76.924	0.34443	76.924	76.75	77.095	0					17	10	2	0	0	0	0.069258	1	32033	32033		60.39	9.5345	1	1075600			7993	4178	3849	3870	9890	9890					0.03742938211712499
GLSEPIFQL	9	Unmodified	_GLSEPIFQL_					0	0	0		ENSG00000171109|ENST00000471841|MFN1	ENSG00000171109|ENST00000471841|MFN1	ENSG00000171109|ENST00000471841|MFN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2779724001884	2	502.276575	1002.5386	2.7269	0.0013697	-0.99514	-0.00049983	1.7318	0.00086982	502.27590465281384	76.434	0.34697	76.755	76.602	76.949	0.32163					17	10	2	0	0	0	0.051699	1	31974	31974		67.344	16.489	1	712220			7994	4178	3849	3870	9891	9891					0.03742938211712499
GLSETILAV	9	Unmodified	_GLSETILAV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	902.5226318240166	1	902.519325	901.512048	1.8281	0.0016499	1.4694	0.0013261	3.2975	0.002976	902.5206871077024	64.414	0.35369	64.414	64.238	64.592	0					17	10	2	0	0	0	0.1735	1	26886	26886		36.044	7.5574	1	1270500			7995	1828	3850	3871	9892	9892					0.057352493203779886
GLSETILAV	9	Unmodified	_GLSETILAV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	902.5227538943291	1	902.519325	901.512048	1.9695	0.0017775	1.2278	0.0011081	3.1973	0.0028856	902.5209118093302	64.024	0.3193	64.353	64.146	64.466	0.32899					21	9	3	0	0	0	0.069258	1	26830	26830		60.39	15.983	1	1118700			7996	1828	3850	3871	9893	9893					0.057352493203779886
GLSETILAV	9	Unmodified	_GLSETILAV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5222045779228	1	902.519325	901.512048	2.6383	0.0023811	0.43026	0.00038832	3.0686	0.0027694	902.5194857147502	62.799	0.56913	64.212	63.807	64.376	1.4134					42	18	3	0	0	0	0.01705	2	26358	26307;26358		101.72	23.738	1	5489900			7997	1828	3850	3871	9894;9895	9895					0.057352493203779886
GLSETILAV	9	Unmodified	_GLSETILAV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5204345583916	1	902.519325	901.512048	2.9354	0.0026493	-0.22117	-0.00019961	2.7142	0.0024497	902.5191576294263	62.23	0.60378	64.187	63.815	64.419	1.9571					45	19	3	0	0	0	0.028763	2	26121	26121;26177		89.427	22.083	1	4031800			7998	1828	3850	3871	9896;9897	9896					0.057352493203779886
GLSETILAV	9	Unmodified	_GLSETILAV_					0	0	0		NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant;nc|ENSG00000113569|O75694-2|NUP155;ENSG00000113569|ENST00000231498|NUP155	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.7638427615166	2	451.7633	901.512048	3.3306	0.0015046	-0.52355	-0.00023652	2.8071	0.0012681	451.7628935198611	62.256	0.54241	64.214	63.815	64.358	1.9571					29	17	3	0	0	0	0.078975	1	26123	26123		56.541	18.39	1	3043200			7999	1828	3850	3871	9898	9898					0.057352493203779886
GLSIRFKVVL	10	Unmodified	_GLSIRFKVVL_					0	0	0		ENSG00000119913|ENST00000646139|TECTB	ENSG00000119913|ENST00000646139|TECTB	ENSG00000119913|ENST00000646139|TECTB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.3655883669853	2	566.366059	1130.71756	2.6466	0.0014989	-1.7209	-0.00097467	0.92563	0.00052425	566.3649984674998	106.02	0.14369	106.07	105.98	106.12	0.05455					17	6	4	0	0	0	0.89803	1	45067	45067		1.3295	0.63916	1	117670000			8000	2090	3851	3872	9899	9899					0.15743447570457647
GLSLSTLVVT	10	Unmodified	_GLSLSTLVVT_					0	0	0			REV__ENST00000228506.7_1_12:121137680-121137947:+|nuORF	REV__ENST00000228506.7_1_12:121137680-121137947:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2990905642509	2	495.297507	988.580462	2.0128	0.00099693	0.50152	0.0002484	2.5143	0.0012453	495.29759211394065	84.004	0.33507	85.642	85.475	85.81	1.6379					22	10	3	0	0	0	0.75645	1	35209	35209		15.847	0.078963	1	4148600	+		8001	12095	3852	3873	9900	9900					0.08571493900228688
GLSTEGIYRV	10	Unmodified	_GLSTEGIYRV_					0	0	0		ENST00000595822.1_1_19:47440583-47491508:+|nuORF;ARHGAP35|p.N1348Tfs*14|1|0.33|ENSG00000160007|chr19:46999308-46999308|C/-|frameshift_variant;ENSG00000160007|ENST00000672722|ARHGAP35	ENST00000595822.1_1_19:47440583-47491508:+|nuORF	ENST00000595822.1_1_19:47440583-47491508:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	547.7978393435478	2	547.795663	1093.57677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.521	1	36.823	36.323	37.323	0.30197								0	0	0	0.64423	1	15358	15358		19.362	6.3195	1				8002	74	3853	3874	9901	9901					0.03372824126358864
GLSWWQEKEK	10	Unmodified	_GLSWWQEKEK_					0	0	0			REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8881713747978	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.454	1	19.454	18.954	19.954	0								0	0	0	0.66161	1	8086	8086		1.7423	0.14999	1		+		8003	12596	3854	3875	9902	9902					0.0072018456346540916
GLSWWQEKEK	10	Unmodified	_GLSWWQEKEK_					0	0	0			REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.68	1	25.921	25.421	26.421	1.241								0	0	0	0.66035	1	10325	10325		3.8763	1.033	1		+		8004	12596	3854	3875	9903	9903					0.0072018456346540916
GLSWWQEKEK	10	Unmodified	_GLSWWQEKEK_					0	0	0			REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887817263603	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.231	1	25.915	25.415	26.415	1.6845								0	0	0	0.66035	1	10119	10119		3.8763	0	1		+		8005	12596	3854	3875	9904	9904					0.0072018456346540916
GLSWWQEKEK	10	Unmodified	_GLSWWQEKEK_					0	0	0			REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	REV__ENST00000360943.9_1_17:47004499-47005111:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.344	1	26.029	25.529	26.529	1.6845								0	0	0	0.66151	1	10168	10168		1.9064	0	1		+		8006	12596	3854	3875	9905	9905					0.0072018456346540916
GLTEALHFV	9	Unmodified	_GLTEALHFV_					0	0	0		ENSG00000125817|ENST00000379751|CENPB	ENSG00000125817|ENST00000379751|CENPB	ENSG00000125817|ENST00000379751|CENPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.7702209353447	2	493.768917	985.523281	1.7254	0.00085195	0.80488	0.00039742	2.5303	0.0012494	493.76961968546976	59.368	0.34938	59.368	59.194	59.543	0					21	10	3	0	0	0	0.052478	2	24776	24724;24776		67.035	36.811	1	1443500			8007	2278	3855	3876	9906;9907	9907					0.029940714145254788
GLTEALHFV	9	Unmodified	_GLTEALHFV_					0	0	0		ENSG00000125817|ENST00000379751|CENPB	ENSG00000125817|ENST00000379751|CENPB	ENSG00000125817|ENST00000379751|CENPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.7698547244072	2	493.768917	985.523281	3.1531	0.0015569	-0.90139	-0.00044508	2.2517	0.0011118	493.76861038494457	58.821	0.25364	59.146	58.994	59.248	0.32554					18	7	3	0	0	0	0.052478	2	24628	24628;24680		67.035	34.73	1	2167800			8008	2278	3855	3876	9908;9909	9908					0.029940714145254788
GLTEGIWQL	9	Unmodified	_GLTEGIWQL_					0	0	0		nc|ENSG00000087206|Q96RL1-2|UIMC1;nc|ENSG00000087206|Q96RL1-3|UIMC1;ENSG00000087206|ENST00000511320|UIMC1	nc|ENSG00000087206|Q96RL1-2|UIMC1	nc|ENSG00000087206|Q96RL1-2|UIMC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.7740966677666	2	508.7742	1015.53385	2.4245	0.0012335	-1.0081	-0.00051291	1.4164	0.00072062	508.77402997490145	76.559	0.28703	76.881	76.694	76.981	0.32163					13	8	2	0	0	0	0.22519	1	32038	32038		30.225	10.786	1	477340			8009	1086	3856	3877	9910	9910					0.02670054068948957
GLTSTDLLFHL	11	Unmodified	_GLTSTDLLFHL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000534785.1_1_11:65061654-65063444:+|nuORF;ENST00000533192.1_1_11:65055200-65062124:+|nuORF;EHBP1L1-POLA2|1|fusion;nc|ENSG00000014138|Q14181-2|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	608.8348876833916	2	608.832246	1215.64994	2.1318	0.0012979	2.1441	0.0013054	4.2759	0.0026033	608.8323929702967	77.548	0.21825	77.548	77.44	77.658	0					14	6	3	0	0	0	0.2718	1	32292	32292		34.402	20.496	1	1022300			8010	592	3857	3878	9911	9911					0.05073952849011221
GLTSTDLLFHL	11	Unmodified	_GLTSTDLLFHL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000534785.1_1_11:65061654-65063444:+|nuORF;ENST00000533192.1_1_11:65055200-65062124:+|nuORF;EHBP1L1-POLA2|1|fusion;nc|ENSG00000014138|Q14181-2|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8342773318291	2	608.832246	1215.64994	2.4146	0.0014701	1.8345	0.0011169	4.2491	0.002587	608.8335672068671	75.94	0.24327	77.234	77.128	77.371	1.2938					14	7	2	0	0	0	0.087153	1	31885	31885		58.679	38.264	1	2289800			8011	592	3857	3878	9912	9912					0.05073952849011221
GLTSTDLLFHL	11	Unmodified	_GLTSTDLLFHL_					0	0	0		ENSG00000014138|ENST00000265465|POLA2;ENST00000534785.1_1_11:65061654-65063444:+|nuORF;ENST00000533192.1_1_11:65055200-65062124:+|nuORF;EHBP1L1-POLA2|1|fusion;nc|ENSG00000014138|Q14181-2|POLA2;ENST00000527850.5_1_11:65029833-65063521:+|nuORF	ENSG00000014138|ENST00000265465|POLA2	ENSG00000014138|ENST00000265465|POLA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8339111208916	2	608.832246	1215.64994	2.7098	0.0016498	0.88583	0.00053932	3.5957	0.0021892	608.8329185709508	75.417	0.33755	77.199	77.04	77.377	1.7817					17	10	2	0	0	0	0.031838	1	31624	31624		78.149	51.881	1	2242200			8012	592	3857	3878	9913	9913					0.05073952849011221
GLTTILKNV	9	Unmodified	_GLTTILKNV_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;NF1-RAB11FIP4|4|fusion;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-3|NF1;NF1|p.R487Wfs*2|1|0.04|ENSG00000196712|chr17:31214515-31214542|CAAGAAGCTATAAGTATCTTCTCTTGTC/-|frameshift_variant;NF1|p.A463Hfs*10|1|0.71|ENSG00000196712|chr17:31206365-31206365|G/-|frameshift_variant;NF1|p.T467Nfs*3|1|0.61|ENSG00000196712|chr17:31214456-31214457|-/A|frameshift_variant;NF1|p.I85Kfs*12|1|0.58|ENSG00000196712|chr17:31159057-31159075|GATTATATTGGATACACTG/-|frameshift_variant;NF1|p.Y80Lfs*27|1|0.91|ENSG00000196712|chr17:31159042-31159043|-/T|frameshift_variant;NF1|p.Q83*|1|0.44|ENSG00000196712|chr17:31159045-31159048|TCTC/-|frameshift_variant	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.8029662966728	2	479.800217	957.585882	1.6351	0.0007845	1.902	0.0009126	3.5371	0.0016971	479.80095899298584	48.948	0.3428	50.336	50.17	50.513	1.388					22	10	3	0	0	0	0.04145	2	20495	20495;20543		74.929	13.953	1	2929000			8013	4961	3858	3879	9914;9915	9914					0.10539217482710228
GLTTILKNV	9	Unmodified	_GLTTILKNV_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;NF1-RAB11FIP4|4|fusion;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-3|NF1;NF1|p.R487Wfs*2|1|0.04|ENSG00000196712|chr17:31214515-31214542|CAAGAAGCTATAAGTATCTTCTCTTGTC/-|frameshift_variant;NF1|p.A463Hfs*10|1|0.71|ENSG00000196712|chr17:31206365-31206365|G/-|frameshift_variant;NF1|p.T467Nfs*3|1|0.61|ENSG00000196712|chr17:31214456-31214457|-/A|frameshift_variant;NF1|p.I85Kfs*12|1|0.58|ENSG00000196712|chr17:31159057-31159075|GATTATATTGGATACACTG/-|frameshift_variant;NF1|p.Y80Lfs*27|1|0.91|ENSG00000196712|chr17:31159042-31159043|-/T|frameshift_variant;NF1|p.Q83*|1|0.44|ENSG00000196712|chr17:31159045-31159048|TCTC/-|frameshift_variant	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.8027526736259	2	479.800217	957.585882	2.0403	0.00097894	1.1605	0.00055679	3.2008	0.0015357	479.79982680146645	48.397	0.27953	50.374	50.266	50.546	1.9772					18	8	3	0	0	0	0.12251	1	20275	20275		41.84	5.7126	1	2557900			8014	4961	3858	3879	9916	9916					0.10539217482710228
GLTTILKNV	9	Unmodified	_GLTTILKNV_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;NF1-RAB11FIP4|4|fusion;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-3|NF1;NF1|p.R487Wfs*2|1|0.04|ENSG00000196712|chr17:31214515-31214542|CAAGAAGCTATAAGTATCTTCTCTTGTC/-|frameshift_variant;NF1|p.A463Hfs*10|1|0.71|ENSG00000196712|chr17:31206365-31206365|G/-|frameshift_variant;NF1|p.T467Nfs*3|1|0.61|ENSG00000196712|chr17:31214456-31214457|-/A|frameshift_variant;NF1|p.I85Kfs*12|1|0.58|ENSG00000196712|chr17:31159057-31159075|GATTATATTGGATACACTG/-|frameshift_variant;NF1|p.Y80Lfs*27|1|0.91|ENSG00000196712|chr17:31159042-31159043|-/T|frameshift_variant;NF1|p.Q83*|1|0.44|ENSG00000196712|chr17:31159045-31159048|TCTC/-|frameshift_variant	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	479.800217	957.585882	2.5349	0.0012163	-0.32004	-0.00015356	2.2149	0.0010627	479.7999291636438	50.377	0.21884	50.705	50.574	50.793	0.32824	0.23363	-0.0011405	NaN	74.929	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	933930			8015	4961	3858	3879							0.10539217482710228
GLVDDVEKLK	10	Unmodified	_GLVDDVEKLK_					0	0	0			REV__ENSG00000161980|ENST00000293860|POLR3K	REV__ENSG00000161980|ENST00000293860|POLR3K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	372.5491821169853	3	372.548406	1114.62339	1.3983	0.00052093	0.20282	7.556E-05	1.6011	0.00059649	372.54851940336204	41.121	0.53616	42.447	42.178	42.715	1.3254					62	16	5	0	0	0	0.22673	1	17297	17297		39.213	0	1	30206000	+		8016	10629	3859	3880	9917	9917					0.07066263957653973
GLVESYFQD	9	Unmodified	_GLVESYFQD_					0	0	0			REV__ENSG00000197888|ENST00000317746|UGT2B17;REV__ENSG00000213759|ENST00000446444|UGT2B11	REV__ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	353.1670410037041	3	353.166073	1056.47639	0.90876	0.00032094	2.4183	0.00085408	3.3271	0.001175	353.1669652311361	77.645	0.39077	79.397	79.231	79.622	1.7514					32	12	3	0	0	0	0.30098	1	32560	32560		18.373	0	1	4371200	+		8017	11693;11840	3860	3881	9918	9918					-0.049588329272637566
GLVEYEWI	8	Unmodified	_GLVEYEWI_					0	0	0			REV__tr|A0A7D6ZSH7|A0A7D6ZSH7_9CLOTAntitoxinYezGfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07835PE=4SV=1	REV__tr|A0A7D6ZSH7|A0A7D6ZSH7_9CLOTAntitoxinYezGfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07835PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.2989684939384	2	504.755475	1007.4964	2.9176	0.0014727	4.3213	0.0021812	7.2388	0.0036538	504.7579835355038	44.829	0.092453	46.195	46.149	46.242	1.3653					4	2	2	0	0	0	2.3239	1	18780	18780		10.183	0	1	493460	+		8018	15708	3861	3882	9919	9919					-0.007050371966784041
GLVFILYPEAI	11	Unmodified	_GLVFILYPEAI_					0	0	0		nc|ENSG00000103546|P23975-3|SLC6A2;SLC6A2|p.F523Lfs*59|1|0.05|ENSG00000103546|chr16:55699632-55699633|-/GCAAGGGAGACTGAGA|frameshift_variant;ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.8584472537041	2	617.857732	1233.70091	3.256	0.0020117	-3.4347	-0.0021222	-0.17874	-0.00011044	617.8555658383094	73.632	0.34615	74.95	74.748	75.094	1.318					25	10	3	0	0	0	0.81656	2	30885	30885;30934		14.838	4.0143	1	2469000			8019	1435	3862	3883	9920;9921	9920					0.09340901893847331
GLVKQKWL	8	Unmodified	_GLVKQKWL_					0	0	0			REV__nc|ENSG00000198089|A8K8P3-5|SFI1	REV__nc|ENSG00000198089|A8K8P3-5|SFI1	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3064453005791	2	486.30547	970.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.6	1	66.007	65.507	66.507	1.4071								0	0	0	0.56714	1	27094	27094		59.795	12.874	1		+		8020	11702	3863	3884	9922	9922					0.10991244927799926
GLVNPLYGRY	10	Unmodified	_GLVNPLYGRY_					0	0	0			REV__nc|ENSG00000125648|Q9BV35-4|SLC25A23	REV__nc|ENSG00000125648|Q9BV35-4|SLC25A23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3134643435478	2	576.314023	1150.61349	0.72433	0.00041744	-0.65359	-0.00037667	0.070744	4.0771E-05	576.3137583007139	19.844	0.40775	20.903	20.762	21.17	1.0585					28	12	3	0	0	0	0.85124	1	8298	8298		6.7232	0.99131	1	734050	+		8021	9673	3864	3885	9923	9923					0.04421120742927087
GLVNYQISV	9	Unmodified	_GLVNYQISV_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7753784060478	2	496.7742	991.533846	0.76056	0.00037783	-0.038446	-1.9099E-05	0.72212	0.00035873	496.77439088740175	57.33	0.32417	58.745	58.58	58.904	1.4145					17	11	2	0	0	0	0.44535	1	24065	24065		18.135	8.7875	1	2339900			8022	4120	3865	3886	9924	9924					0.03774054068958321
GLVNYQISV	9	Unmodified	_GLVNYQISV_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7754089236259	2	496.7742	991.533846	0.73704	0.00036614	0.48479	0.00024083	1.2218	0.00060697	496.7747879214174	56.767	0.29925	58.735	58.575	58.874	1.9684					16	9	2	0	0	0	0.042029	1	23819	23819		74.423	36.449	1	2864600			8023	4120	3865	3886	9925	9925					0.03774054068958321
GLVNYQISV	9	Unmodified	_GLVNYQISV_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	496.7742	991.533846	1.7129	0.00085092	1.6655	0.00082738	3.3784	0.0016783	496.774969716067	58.861	0.22087	58.861	58.721	58.942	0	0.084411	0.0010107	NaN	74.423	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1046500			8024	4120	3865	3886							0.03774054068958321
GLVNYQISV	9	Unmodified	_GLVNYQISV_					0	0	0		ENST00000475316.5_1_7:65439511-65446985:-|nuORF;nc|ENSG00000169919|P08236-2|GUSB;ENSG00000169919|ENST00000304895|GUSB	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	ENST00000475316.5_1_7:65439511-65446985:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	496.7742	991.533846	3.088	0.0015341	0.81898	0.00040685	3.907	0.0019409	496.77461122491286	58.442	0.21969	58.765	58.619	58.839	0.32299	-0.011614	0.00016968	NaN	74.423	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	676930			8025	4120	3865	3886							0.03774054068958321
GLVPFLVSV	9	Unmodified	_GLVPFLVSV_					0	0	0		ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.5664550662041	1	930.565881	929.558604	1.7365	0.0016159	-0.0091772	-8.54E-06	1.7273	0.0016074	930.565868874618	94.228	0.28092	94.228	94.056	94.337	0					13	8	2	0	0	0	0.22519	1	39373	39373		30.225	0	1	851800			8026	4617	3866	3887	9926	9926					0.09100733942329953
GLVPFLVSV	9	Unmodified	_GLVPFLVSV_					0	0	0		ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.5671264529228	1	930.565881	929.558604	2.7268	0.0025375	-0.84924	-0.00079028	1.8776	0.0017472	930.5647226045871	93.749	0.28664	93.894	93.718	94.005	0.14493					13	8	2	0	0	0	0.10722	1	39237	39237		46.921	6.4723	1	884690			8027	4617	3866	3887	9927	9927					0.09100733942329953
GLVPFLVSV	9	Unmodified	_GLVPFLVSV_					0	0	0		ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	ENSG00000182481|ENST00000330459|KPNA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.5714599490166	1	930.565881	929.558604	3.4521	0.0032124	-1.3717	-0.0012765	2.0804	0.0019359	930.5652835402059	92.397	0.32764	93.724	93.502	93.83	1.3269					15	9	2	0	0	0	0.12174	2	38897	38845;38897		42.095	15.753	1	1513700			8028	4617	3866	3887	9928;9929	9929					0.09100733942329953
GLVRAAKRG	9	Unmodified	_GLVRAAKRG_					0	0	0			REV__LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	REV__LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.2981445193291	2	464.295968	926.577383	1.518	0.00070481	2.8242	0.0013113	4.3423	0.0020161	464.29683607474817	99.574	0.11565	99.574	99.502	99.617	0					6	3	2	0	0	0	0.83753	1	41685	41685		1.8442	1.1539	1	1222200	+		8029	9177	3867	3888	9930	9930					0.1111570835674911
GLVTTLWFIFL	11	Unmodified	_GLVTTLWFIFL_					0	0	0		ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	ENSG00000176200|ENST00000313253|OR4D11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2599670290947	3	437.256675	1308.7482	1.8237	0.00079744	1.069	0.00046742	2.8927	0.0012649	437.25680180361326	83.571	1.6615	83.571	82.8	84.461	0					112	53	3	0	0	0	1.0362	1	35136	35136		1.3296	0.11481	1	2658900			8030	4398	3868	3889	9931	9931					0.10617181164820977
GLWEDGRSTLL	11	Unmodified	_GLWEDGRSTLL_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1;nc|ENSG00000157613|Q96BA8-2|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.8279907107353	2	623.824952	1245.63535	1.1582	0.00072254	1.8662	0.0011642	3.0244	0.0018867	623.8264366065126	55.167	0.256	56.573	56.471	56.727	1.4057					14	8	2	0	0	0	0.093783	1	23123	23123		57.249	13.391	1	1602400			8031	3477	3869	3890	9932	9932					0.0223588070086862
GLWEDGRSTLL	11	Unmodified	_GLWEDGRSTLL_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1;nc|ENSG00000157613|Q96BA8-2|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8256103396416	2	623.824952	1245.63535	0.68463	0.00042709	-0.30642	-0.00019115	0.37821	0.00023594	623.8241939156758	54.732	0.25666	56.7	56.583	56.84	1.9684					15	8	2	0	0	0	0.14563	1	22980	22980		47.594	21.326	1	1570900			8032	3477	3869	3890	9933	9933					0.0223588070086862
GLWEEAYRV	9	Unmodified	_GLWEEAYRV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.7828246951103	2	561.782556	1121.55056	1.5714	0.00088278	0.18481	0.00010382	1.7562	0.0009866	561.7830794029976	50.387	0.605	50.387	50.245	50.85	0					27	18	3	0	0	0	0.079895	1	21016	21016		56.177	18.203	1	1518500			8033	2806	3870	3891	9934	9934					-0.005354450451250159
GLWEEAYRV	9	Unmodified	_GLWEEAYRV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.7843505740166	2	561.782556	1121.55056	1.6456	0.00092446	-0.49604	-0.00027866	1.1495	0.0006458	561.7831935813294	49.862	0.34142	50.192	50.017	50.358	0.33019					22	10	3	0	0	0	0.18809	2	20936	20870;20936		34.402	15.145	1	2100000			8034	2806	3870	3891	9935;9936	9936					-0.005354450451250159
GLWEEAYRV	9	Unmodified	_GLWEEAYRV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7843505740166	2	561.782556	1121.55056	1.3967	0.00078466	0.62491	0.00035107	2.0216	0.0011357	561.7831126548541	48.556	0.48849	49.944	49.743	50.231	1.388					34	15	3	0	0	0	0.031377	2	20342	20291;20342		85.272	33.004	1	5452700			8035	2806	3870	3891	9937;9938	9938					-0.005354450451250159
GLWEEAYRV	9	Unmodified	_GLWEEAYRV_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7837402224541	2	561.782556	1121.55056	2.2612	0.0012703	0.063568	3.5712E-05	2.3247	0.001306	561.7826198698635	48.091	0.55402	50.068	49.868	50.422	1.9772					41	17	4	0	0	0	0.031377	3	20146	20095;20146;20203		85.272	33.004	1	5014400			8036	2806	3870	3891	9939;9940;9941	9940					-0.005354450451250159
GLWGHALLL	9	Unmodified	_GLWGHALLL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.2906066775322	2	490.28982	978.565087	1.5042	0.00073751	-0.49178	-0.00024111	1.0125	0.0004964	490.28983682094696	71.697	0.28808	71.697	71.541	71.829	0					14	8	2	0	0	0	0.16975	1	29851	29851		36.466	4.3492	1	551280			8037	3208	3871	3892	9942	9942					0.07494671893698523
GLWGHALLL	9	Unmodified	_GLWGHALLL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2913696169853	2	490.28982	978.565087	2.1903	0.0010739	0.95103	0.00046628	3.1414	0.0015402	490.2905135815331	71.006	0.28857	71.33	71.174	71.462	0.32359					14	8	2	0	0	0	0.16975	1	29710	29710		36.466	0	1	867960			8038	3208	3871	3892	9943	9943					0.07494671893698523
GLWGHALLL	9	Unmodified	_GLWGHALLL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2920715212822	2	490.28982	978.565087	2.582	0.0012659	0.87167	0.00042737	3.4536	0.0016933	490.29047413471795	69.757	0.40749	71.111	70.896	71.304	1.3536					30	12	3	0	0	0	0.051525	2	29258	29258;29310		67.413	11.365	1	2681700			8039	3208	3871	3892	9944;9945	9944					0.07494671893698523
GLWGHALLL	9	Unmodified	_GLWGHALLL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2910644412041	2	490.28982	978.565087	1.5808	0.00077506	1.7585	0.00086216	3.3393	0.0016372	490.2909631088375	69.197	0.6455	71.05	70.648	71.293	1.853					42	20	4	0	0	0	0.08022	2	29033	28986;29033		56.048	19.582	1	2249900			8040	3208	3871	3892	9946;9947	9947					0.07494671893698523
GLWGPVHEL	9	Unmodified	_GLWGPVHEL_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2716552615166	2	504.269084	1006.52362	2.2144	0.0011166	1.3842	0.00069803	3.5986	0.0018147	504.2699025568288	53.147	0.37093	53.47	53.29	53.661	0.32283					19	11	2	0	0	0	0.24063	1	22238	22238		28.487	0.31361	1	1418200			8041	5052	3872	3893	9948	9948					0.020614911343841413
GLWGPVHEL	9	Unmodified	_GLWGPVHEL_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2675964236259	2	504.269084	1006.52362	1.1509	0.00058037	-1.9448	-0.00098071	-0.79389	-0.00040033	504.2676361074291	51.864	0.36532	53.261	53.095	53.46	1.3966					24	12	3	0	0	0	0.11478	2	21717	21677;21717		44.407	6.2558	1	4078700			8042	5052	3872	3893	9949;9950	9950					0.020614911343841413
GLWGPVHEL	9	Unmodified	_GLWGPVHEL_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2679626345634	2	504.269084	1006.52362	-0.089961	-4.5365E-05	-4.1194	-0.0020773	-4.2094	-0.0021227	504.2662722195981	51.182	0.51732	53.157	52.942	53.46	1.9753					25	20	2	0	0	0	0.11478	2	21473	21473;21526		44.407	7.9409	1	4008600			8043	5052	3872	3893	9951;9952	9951					0.020614911343841413
GLWGTVVNI	9	Unmodified	_GLWGTVVNI_					0	0	0		ENST00000583043.5_1_18:67684852-67806940:-|nuORF;nc|ENSG00000176225|Q86VV8-3|RTTN;ENSG00000176225|ENST00000640769|RTTN	ENST00000583043.5_1_18:67684852-67806940:-|nuORF	ENST00000583043.5_1_18:67684852-67806940:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.5378906130791	1	958.535643	957.528367	1.9775	0.0018955	1.4761	0.0014149	3.4536	0.0033104	958.5377079000181	78.597	0.24496	79.864	79.694	79.939	1.2668					10	7	2	0	0	0	0.069258	1	33005	33005		60.39	16.531	1	877980			8044	4400	3873	3894	9953	9953					0.04790375277127623
GLWHAGVEPL	10	Unmodified	_GLWHAGVEPL_					0	0	0			REV__ENST00000156825.5_1_19:1576705-1576897:-|nuORF	REV__ENST00000156825.5_1_19:1576705-1576897:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.7870971560478	2	539.787641	1077.56073	1.7826	0.00096222	0.83995	0.0004534	2.6226	0.0014156	539.7881287374996	58.027	0.67303	58.027	57.658	58.331	0					69	20	5	0	0	0	0.73251	1	24103	24103		16.942	0	1	9339500	+		8045	12044	3874	3895	9954	9954					0.02505162680131434
GLWHGMFANV	10	Unmodified	_GLWHGMFANV_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MSMS	GG20161007_CRH_Patient100_A02_01	1	566.2758056521416	2	566.273844	1130.53313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.475	1	62.475	61.975	62.975	0								0	0	0	0.55159	1	26046	26046		23.148	13.074	1				8046	799	3875	3896	9955	9955					-0.0269106385176201
GLWHGMFANV	10	Unmodified	_GLWHGMFANV_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.2744018435478	2	566.273844	1130.53313	1.8595	0.001053	0.6116	0.00034633	2.4711	0.0013993	566.2744266420214	61.878	0.21741	62.208	62.073	62.29	0.32974					10	6	2	0	0	0	0.48057	1	25914	25914		28.487	15.444	1	325280			8047	799	3875	3896	9956	9956					-0.0269106385176201
GLWHGMFANV	10	Unmodified	_GLWHGMFANV_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	566.3152953982353	2	566.273844	1130.53313	3.2905	0.0018633	-0.045449	-2.5737E-05	3.2451	0.0018376	566.275416174952	60.667	0.25021	62.086	61.903	62.153	1.4196					17	7	3	0	0	0	0.12332	1	25468	25468		21.747	12.364	1	682060			8048	799	3875	3896	9957	9957					-0.0269106385176201
GLWHGMFANV	10	Unmodified	_GLWHGMFANV_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	ENSG00000066084|ENST00000301180|DIP2B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	566.3152343630791	2	566.273844	1130.53313	3.1647	0.0017921	0.8081	0.00045761	3.9728	0.0022497	566.2753824909989	60.104	0.31518	62.07	61.883	62.199	1.9653					20	9	3	0	0	0	0.12381	1	25271	25271		11.64	4.3511	1	658760			8049	799	3875	3896	9958	9958					-0.0269106385176201
GLWHGVLTSV	10	Unmodified	_GLWHGVLTSV_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	534.7628051638603	2	534.795466	1067.57638	1.8221	0.00097443	1.2154	0.00064999	3.0375	0.0016244	534.7957848535151	54.303	0.43958	55.708	55.459	55.899	1.4048					32	13	3	0	0	0	0.099098	1	22744	22744		48.346	27.892	1	2155300			8050	3554	3876	3897	9959	9959					0.04529449197161739
GLWHGVLTSV	10	Unmodified	_GLWHGVLTSV_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	534.3488036990166	2	534.795466	1067.57638	1.3403	0.00071677	0.84986	0.0004545	2.1901	0.0011713	534.7957631970721	53.755	0.40667	55.725	55.533	55.939	1.9697					23	12	2	0	0	0	0.12484	1	22490	22490		7.2892	2.5332	1	2007400			8051	3554	3876	3897	9960	9960					0.04529449197161739
GLWHGVLTSV	10	Unmodified	_GLWHGVLTSV_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;ENST00000494435.5_1_21:47924311-47965916:+|nuORF;nc|ENSG00000160305|Q14689-3|DIP2A;nc|ENSG00000160305|Q14689-2|DIP2A;nc|ENSG00000160305|Q14689-4|DIP2A;nc|ENSG00000160305|Q14689-5|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	534.795466	1067.57638	1.8467	0.00098758	-2.0399	-0.0010909	-0.19325	-0.00010335	534.7944561987973	55.508	0.17038	55.508	55.433	55.603	0	-0.13908	-0.0030124	NaN	48.346	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	746930			8052	3554	3876	3897							0.04529449197161739
GLWKLLGG	8	Unmodified	_GLWKLLGG_					0	0	0		nc|ENSG00000163938|Q9BVP2-2|GNL3;ENSG00000163938|ENST00000418458|GNL3	nc|ENSG00000163938|Q9BVP2-2|GNL3	nc|ENSG00000163938|Q9BVP2-2|GNL3	MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2574340701103	2	422.257988	842.501424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.324	1	92.324	91.824	92.824	0								0	0	0	1.0178	1	38580	38580		2.3027	0	1				8053	3734	3877	3898	9961	9961					0.07387311456625412
GLWKVALNQ	9	Unmodified	_GLWKVALNQ_					0	0	0			REV__nc|ENSG00000144712|O75155-2|CAND2	REV__nc|ENSG00000144712|O75155-2|CAND2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5350219607353	3	343.534431	1027.58147	0.44265	0.00015206	1.3611	0.00046757	1.8037	0.00061963	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.82654	1	10539	10539		2.2828	0.5405	1	4123700	+		8054	14454	3878	3899	9962	9962					0.06877753059779934
GLWLVPEGL	9	Unmodified	_GLWLVPEGL_					0	0	0			REV__ENSG00000154153|ENST00000306320|RETREG1	REV__ENSG00000154153|ENST00000306320|RETREG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2807800173759	2	492.28166	982.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.793	1	91.984	91.484	92.484	0.19042								0	0	0	0.42693	1	38443	38443		5.2307	0	1		+		8055	10461	3879	3900	9963	9963					0.05679545936936847
GLWRGEEVTL	10	Unmodified	_GLWRGEEVTL_					0	0	0		nc|ENSG00000153827|Q14669-4|TRIP12;TRIP12-MFI2|1|fusion;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3098022341728	2	580.308938	1158.60332	1.4703	0.00085325	1.9172	0.0011126	3.3875	0.0019658	580.3100311267676	48.371	0.37403	49.758	49.49	49.864	1.388					18	11	2	0	0	0	0.63205	1	20245	20245		21.537	1.0834	1	1173300			8056	3366	3880	3901	9964	9964					0.030365130177187893
GLWRRLRPRQ	10	Unmodified	_GLWRRLRPRQ_					0	0	0		ENST00000315930.10_3_X:137793281-137793449:-|nuORF	ENST00000315930.10_3_X:137793281-137793449:-|nuORF	ENST00000315930.10_3_X:137793281-137793449:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	669.4070922732353	2	669.404904	1336.79525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.77	1	101.96	101.46	102.46	0.19076								0	0	0	0.66166	1	42790	42790		1.6526	0.69035	1				8057	5828	3881	3902	9965	9965					0.1403289827919707
GLWRWLRRL	9	Unmodified	_GLWRWLRRL_					0	0	0		ENST00000269321.11_1_17:79825624-79826158:-|nuORF	ENST00000269321.11_1_17:79825624-79826158:-|nuORF	ENST00000269321.11_1_17:79825624-79826158:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	419.3165771365166	3	419.256003	1254.74618	1.8584	0.00077916	4.4224	0.0018541	6.2808	0.0026333	419.25651902840485	39.954	0.28134	41.816	41.738	42.019	1.8624					12	8	2	0	0	0	0.11938	1	16799	16799		0.26902	0	1	622070			8058	5670	3882	3903	9966	9966					0.1289960999026789
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1051.541430652142	1	1051.54587	1050.5386	2.7209	0.0028612	-0.17649	-0.00018558	2.5445	0.0026756	1051.545558682631	86.5	0.39273	86.5	86.277	86.67	0					28	12	3	0	0	0	0.11478	1	35997	35997		44.407	2.5674	1	4377500			8059	3845	3883	3904	9967	9967					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2787353396416	2	526.276575	1050.5386	2.815	0.0014815	0.50589	0.00026624	3.3209	0.0017477	526.2768844360239	86.443	0.33514	86.443	86.277	86.612	0					16	10	2	0	0	0	0.41943	1	36022	36022		19.439	5.9311	1	1009600			8060	3845	3883	3904	9968	9968					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.2771484255791	2	526.276575	1050.5386	2.7411	0.0014426	0.025252	1.3289E-05	2.7664	0.0014559	526.2765747100233	85.924	0.33555	86.176	86.006	86.341	0.25227					16	10	2	0	0	0	0.51832	1	35924	35924		14.582	5.2343	1	1313900			8061	3845	3883	3904	9969	9969					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1051.546191394329	1	1051.54587	1050.5386	3.1378	0.0032995	-2.3346	-0.0024549	0.80319	0.00084459	1051.5434570704933	86.013	0.39669	86.265	86.006	86.402	0.25227					29	12	3	0	0	0	0.069258	2	35961	35961;36013		60.39	8.1212	1	5699800			8062	3845	3883	3904	9970;9971	9970					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1051.551196277142	1	1051.54587	1050.5386	2.4705	0.0025979	1.9505	0.002051	4.4211	0.0046489	1051.5478917749015	85.071	0.33508	86.23	86.026	86.361	1.159					28	10	3	0	0	0	0.046276	2	35699	35656;35699		70.716	19.86	1	12647000			8063	3845	3883	3904	9972;9973	9973					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2762939333916	2	526.276575	1050.5386	2.386	0.0012557	0.67363	0.00035452	3.0596	0.0016102	526.2766589771653	85.097	0.36227	86.256	86.056	86.418	1.159					21	11	2	0	0	0	0.22519	2	35680	35680;35733		30.225	12.09	1	3962900			8064	3845	3883	3904	9974;9975	9974					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2788574099541	2	526.276575	1050.5386	2.5936	0.0013649	1.1113	0.00058486	3.7049	0.0019498	526.2769294518157	84.607	0.42871	86.203	85.972	86.401	1.5962					29	13	3	0	0	0	0.09539	2	35489	35442;35489		50.855	16.753	1	4894000			8065	3845	3883	3904	9976;9977	9977					0.015349382117165078
GLYEGLTWL	9	Unmodified	_GLYEGLTWL_					0	0	0		ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	ENSG00000165527|ENST00000298316|ARF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1051.551318347454	1	1051.54587	1050.5386	3.4272	0.0036039	0.69192	0.00072758	4.1191	0.0043315	1051.5466218132633	84.586	0.36967	86.182	85.972	86.341	1.5962					28	11	3	0	0	0	0.051699	2	35502	35451;35502		67.344	17.531	1	10074000			8066	3845	3883	3904	9978;9979	9979					0.015349382117165078
GLYGLIVAL	9	Unmodified	_GLYGLIVAL_					0	0	0		ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	ENSG00000185883|ENST00000330398|ATP6V0C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	918.5700561404228	1	918.565881	917.558604	1.8488	0.0016983	0.88248	0.00081062	2.7313	0.0025089	918.5663846416262	93.122	0.37431	93.122	92.953	93.327	0					20	11	2	0	0	0	0.08022	1	38938	38938		56.048	10.298	1	1562700			8067	4768	3884	3905	9980	9980					0.09652733942323266
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.7939330935478	2	508.792392	1015.57023	1.9581	0.00099626	2.0307	0.0010332	3.9888	0.0020295	508.7935651865135	72.759	0.4716	72.759	72.524	72.996	0					24	14	3	0	0	0	0.11478	1	30301	30301		44.407	14.182	1	1590400			8068	2514	3885	3906	9981	9981					0.06306930965672564
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1016.576220691204	1	1016.57751	1015.57023	1.7402	0.0017691	1.1448	0.0011638	2.8851	0.0029329	1016.57959610568	72.73	0.28432	72.73	72.588	72.872	0					14	8	2	0	0	0	0.49082	1	30332	30332		15.847	4.2069	1	1003000			8069	2514	3885	3906	9982	9982					0.06306930965672564
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1016.578662097454	1	1016.57751	1015.57023	2.214	0.0022507	-0.15141	-0.00015392	2.0626	0.0020968	1016.5794526750292	72.247	0.28519	72.572	72.42	72.705	0.32494					11	8	2	0	0	0	0.12174	1	30209	30209		42.095	4.1206	1	1015200			8070	2514	3885	3906	9983	9983					0.06306930965672564
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.7943908572197	2	508.792392	1015.57023	2.1222	0.0010797	2.0268	0.0010312	4.149	0.002111	508.79357168959444	72.273	0.47059	72.598	72.388	72.859	0.32494					31	14	3	0	0	0	0.09539	1	30242	30242		50.855	14.811	1	1520000			8071	2514	3885	3906	9984	9984					0.06306930965672564
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.583972156048	1	1016.57751	1015.57023	1.9192	0.001951	1.4632	0.0014875	3.3824	0.0034385	1016.5792821023535	71.094	0.26893	72.435	72.302	72.571	1.3415					14	8	2	0	0	0	0.066815	1	29832	29832		61.357	2.6787	1	2450400			8072	2514	3885	3906	9985	9985					0.06306930965672564
GLYPNLIQV	9	Unmodified	_GLYPNLIQV_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1016.57751	1015.57023	1.102	0.0011202	-0.14652	-0.00014895	0.95543	0.00097127	1016.5779773166884	70.649	0.3031	72.487	72.319	72.622	1.8378	-0.069021	-0.00082782	NaN	61.357	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2353200			8073	2514	3885	3906							0.06306930965672564
GMAALLTGV	9	Unmodified	_GMAALLTGV_					0	0	0		ENSG00000233493|ENST00000444469|TMEM238	ENSG00000233493|ENST00000444469|TMEM238	ENSG00000233493|ENST00000444469|TMEM238	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	832.4619018435478	1	832.459701	831.452425	2.6416	0.002199	1.1014	0.00091691	3.743	0.0031159	832.4607507062369	63.958	0.2789	65.886	65.733	66.012	1.928					13	8	2	0	0	0	0.078975	1	26841	26841		56.541	3.8482	1	1013300			8074	5310	3886	3907	9986	9986					0.0299565510534876
GMAALLTGV	9	Unmodified	_GMAALLTGV_					0	0	0		ENSG00000233493|ENST00000444469|TMEM238	ENSG00000233493|ENST00000444469|TMEM238	ENSG00000233493|ENST00000444469|TMEM238	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	832.459701	831.452425	1.7489	0.0014559	4.4301	0.0036879	6.179	0.0051438	832.4626342161554	66.085	0.22878	66.085	65.992	66.221	0	0.13736	0.0032919	NaN	56.541	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343180			8075	5310	3886	3907							0.0299565510534876
GMADDLKR	8	Unmodified	_GMADDLKR_					0	0	0		nc|ENSG00000177694|Q58DX5-2|NAALADL2;ENST00000485853.5_1_3:174577149-174974391:+|nuORF;ENST00000473253.5_1_3:174581768-175298945:+|nuORF;ENSG00000177694|ENST00000454872|NAALADL2	nc|ENSG00000177694|Q58DX5-2|NAALADL2	nc|ENSG00000177694|Q58DX5-2|NAALADL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	302.4882079958916	3	302.488493	904.443651	-0.63894	-0.00019327	-0.40287	-0.00012186	-1.0418	-0.00031513	302.4884156063744	10.837	0.29532	11.599	11.436	11.731	0.76165					28	11	3	0	0	0	0.71199	1	4510	4510		29.082	1.4528	1	3151200			8076	4459	3887	3908	9987	9987					-0.012393185311225352
GMFNGIISI	9	Unmodified	_GMFNGIISI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	951.4977905154228	1	951.496815	950.489538	2.2168	0.0021093	-1.7353	-0.0016512	0.48146	0.00045811	951.49590632668	82.298	0.27643	82.578	82.428	82.704	0.2802					13	8	2	0	0	0	0.34572	1	34402	34402		23.148	6.2061	1	877890			8077	3732	3888	3909	9988	9988					0.012313266511227994
GMFNGIISI	9	Unmodified	_GMFNGIISI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	951.4986450076103	1	951.496815	950.489538	2.6671	0.0025377	0.030509	2.9029E-05	2.6976	0.0025668	951.4976101135877	81.345	0.37054	82.579	82.378	82.749	1.2332					17	11	2	0	0	0	0.076627	1	34146	34146		57.471	9.1255	1	1759100			8078	3732	3888	3909	9989	9989					0.012313266511227994
GMFNGIISI	9	Unmodified	_GMFNGIISI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	951.496815	950.489538	2.127	0.0020239	-1.3936	-0.001326	0.73347	0.00069789	951.4953387385782	82.785	0.30718	82.785	82.615	82.922	0	0.15436	-0.00023855	NaN	57.471	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1068900			8079	3732	3888	3909							0.012313266511227994
GMFNGIISI	9	Unmodified	_GMFNGIISI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	951.496815	950.489538	2.7264	0.0025941	-0.57831	-0.00055026	2.1481	0.0020439	951.4964938243427	80.885	0.37144	82.581	82.394	82.766	1.6959	-0.049603	0.00053716	NaN	57.471	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1230000			8080	3732	3888	3909							0.012313266511227994
GMLDGLVNV	9	Unmodified	_GMLDGLVNV_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-3|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	917.4795410037041	1	917.476079	916.468803	1.6373	0.0015021	3.31	0.0030368	4.9473	0.004539	917.4794912921643	72.825	0.21844	72.825	72.715	72.933	0					11	6	2	0	0	0	0.051699	1	30326	30326		67.344	27.387	1	1245400			8081	956	3889	3910	9990	9990					0.007227362714502306
GMLDGLVNV	9	Unmodified	_GMLDGLVNV_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-3|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	917.4803954958916	1	917.476079	916.468803	2.0139	0.0018477	1.6939	0.0015541	3.7078	0.0034018	917.4776835362153	72.479	0.31052	72.804	72.611	72.921	0.32494					14	9	2	0	0	0	0.076627	1	30286	30286		57.471	13.064	1	1243000			8082	956	3889	3910	9991	9991					0.007227362714502306
GMLDGLVNV	9	Unmodified	_GMLDGLVNV_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-3|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	917.4746581912041	1	917.476079	916.468803	1.8987	0.001742	-2.9962	-0.002749	-1.0975	-0.001007	917.475008320613	71.412	0.36514	72.753	72.571	72.936	1.3415					22	11	3	0	0	0	0.051699	2	29949	29949;29996		67.344	21.323	1	2489400			8083	956	3889	3910	9992;9993	9992					0.007227362714502306
GMLDGLVNV	9	Unmodified	_GMLDGLVNV_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-3|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	917.4821044802666	1	917.476079	916.468803	1.064	0.00097616	-0.84397	-0.00077433	0.21999	0.00020184	917.4760565399579	71.014	0.30531	72.838	72.667	72.972	1.824					20	9	3	0	0	0	0.051699	2	29774	29774;29824		67.344	27.387	1	2664300			8084	956	3889	3910	9994;9995	9994					0.007227362714502306
GMLEKIDMI	9	Unmodified	_GMLEKIDMI_					0	0	0		ENSG00000244462|ENST00000374114|RBM12	ENSG00000244462|ENST00000374114|RBM12	ENSG00000244462|ENST00000374114|RBM12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2723266482353	2	525.272121	1048.52969	1.3433	0.00070557	0.6257	0.00032866	1.969	0.0010342	525.2723989401724	54.729	0.31398	56.697	56.495	56.809	1.9684					14	10	2	0	0	0	0.043696	1	22926	22926		72.968	11.61	1	1449900			8085	5364	3890	3911	9996	9996					0.007365052593740984
GMRKGKGG	8	Unmodified	_GMRKGKGG_					0	0	0			REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	790.5885497927666	1	790.435218	789.427941	1.2965	0.0010248	3.7294	0.0029478	5.0258	0.0039726	790.4380973274706	107.56	0.15385	107.56	107.47	107.62	0					12	7	2	0	0	0	2.3239	1	46163	46163		0	0	1	8870500	+		8086	15759	3891	3912	9997	9997					0.024804397424986746
GMRKGKGG	8	Unmodified	_GMRKGKGG_					0	0	0			REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	790.5896484255791	1	790.435218	789.427941	2.7487	0.0021727	3.3212	0.0026252	6.0699	0.0047979	790.4379843532415	107.53	0.15825	107.58	107.48	107.64	0.052452					11	7	2	0	0	0	2.3239	1	46010	46010		0	0	1	8495700	+		8087	15759	3891	3912	9998	9998					0.024804397424986746
GMRKGKGG	8	Unmodified	_GMRKGKGG_					0	0	0			REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	790.5890380740166	1	790.435218	789.427941	2.6858	0.002123	0.73412	0.00058027	3.4199	0.0027032	790.4359167269226	107.51	0.11388	107.66	107.6	107.72	0.15781					8	5	2	0	0	0	2.3239	1	46257	46257		0	0	1	5307500	+		8088	15759	3891	3912	9999	9999					0.024804397424986746
GMRKGKGG	8	Unmodified	_GMRKGKGG_					0	0	0			REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	REV__tr|A0A7D6ZXD4|A0A7D6ZXD4_9CLOT2-C-methyl-D-erythritol4-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=ispDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	790.5886108279228	1	790.435218	789.427941	2.855	0.0022567	0.2209	0.0001746	3.0759	0.0024313	790.435480089163	107.49	0.095322	107.65	107.56	107.66	0.15795					7	4	2	0	0	0	2.3239	1	46187	46187		0	0	1	1736100	+		8089	15759	3891	3912	10000	10000					0.024804397424986746
GMWGGAMLGV	10	Unmodified	_GMWGGAMLGV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	978.4543334841728	1	978.45357	977.446293	2.7413	0.0026822	-0.18059	-0.0001767	2.5607	0.0025055	978.4531011444228	72.249	0.34106	73.579	73.391	73.732	1.3297					21	10	3	0	0	0	0.56346	2	30288	30288;30336		24.674	8.8267	1	1933200			8090	8023	3892	3913	10001;10002	10001					-0.04333186397809641
GMWGGAMLGV	10	Unmodified	_GMWGGAMLGV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7318908572197	2	489.730423	977.446293	2.488	0.0012184	-0.12438	-6.0912E-05	2.3636	0.0011575	489.73070748897	72.232	0.40146	73.561	73.361	73.762	1.3298					26	12	3	0	0	0	0.56346	2	30310	30310;30366		24.674	12.142	1	1766700			8091	8023	3892	3913	10003;10004	10003					-0.04333186397809641
GMWGGAMLGV	10	Unmodified	_GMWGGAMLGV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7307617068291	2	489.730423	977.446293	2.3749	0.0011631	-0.51058	-0.00025005	1.8643	0.000913	489.7304177908733	71.757	0.34305	73.581	73.412	73.756	1.824					24	10	3	0	0	0	0.12362	2	30084	30084;30137		59.795	38.924	1	2227100			8092	8023	3892	3913	10005;10006	10005					-0.04333186397809641
GMWGGAMLGV	10	Unmodified	_GMWGGAMLGV_					0	0	0		nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	nc|ENSG00000291317|P0DTL5|TMEM276	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	978.4545776247978	1	978.45357	977.446293	2.3391	0.0022887	-0.33706	-0.0003298	2.002	0.0019589	978.4529332469091	71.805	0.34305	73.629	73.412	73.756	1.824					16	10	2	0	0	0	0.70643	1	30101	30101		18.135	0	1	1361100			8093	8023	3892	3913	10007	10007					-0.04333186397809641
GMYGKIAVMEL	11	Oxidation (M)	_GM(Oxidation (M))YGKIAVMEL_		GM(1)YGKIAVMEL		GM(36)YGKIAVM(-36)EL	0	0	1		ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1;ENST00000537120.5_1_11:61091345-61100440:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3092529177666	2	614.309235	1226.60392	1.5411	0.0009467	-0.54694	-0.00033599	0.99415	0.00061071	614.3094174146986	49.953	0.28121	51.93	51.758	52.039	1.9772					18	8	3	0	0	0	0.17708	1	20920	20920		41.956	26.108	2	1043200			8094	4005	3893	3914	10008	10008		67			-0.0003215164911125612
GMYIFLHTV	9	Oxidation (M)	_GM(Oxidation (M))YIFLHTV_		GM(1)YIFLHTV		GM(67)YIFLHTV	0	0	1		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	548.7800170779228	2	548.778428	1095.5423	1.6397	0.00089985	1.1294	0.00061978	2.7691	0.0015196	548.7792010980944	52.059	0.43326	52.059	51.822	52.255	0					30	13	3	0	0	0	0.051699	1	21718	21718		67.344	40.46	1	1829700			8095	4227	3894	3915	10009	10009		72			-0.0016471528608690278
GMYIFLHTV	9	Oxidation (M)	_GM(Oxidation (M))YIFLHTV_		GM(1)YIFLHTV		GM(67)YIFLHTV	0	0	1		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.7790405154228	2	548.778428	1095.5423	2.3641	0.0012974	0.90683	0.00049765	3.2709	0.001795	548.7784633405857	50.149	1.0333	51.54	51.042	52.075	1.3911					59	32	3	0	0	0	0.051699	1	21010	21010		67.344	45.597	1	2701100			8096	4227	3894	3915	10010	10010		72			-0.0016471528608690278
GMYIFLHTV	9	Oxidation (M)	_GM(Oxidation (M))YIFLHTV_					0	0	1		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	548.778428	1095.5423	1.6966	0.00093106	1.5109	0.00082913	3.2075	0.0017602	548.7788980495137	51.487	0.40725	51.812	51.663	52.071	0.32554	0.0084209	0.00039217	NaN	67.344	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1853300			8097	4227	3894	3915				72			-0.0016471528608690278
GMYIFLHTV	9	Unmodified	_GMYIFLHTV_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.7813598513603	2	540.78097	1079.54739	1.82	0.00098422	-0.8847	-0.00047843	0.93531	0.0005058	540.7806872404086	63.817	0.39561	63.817	63.651	64.046	0					30	12	3	0	0	0	0.03795	2	26611	26564;26611		77.984	52.585	1	3957000			8098	4227	3894	3916	10011;10012	10012					0.010795885765219282
GMYIFLHTV	9	Unmodified	_GMYIFLHTV_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.7820922732353	2	540.78097	1079.54739	1.9175	0.0010369	0.33243	0.00017977	2.2499	0.0012167	540.7811086489103	63.248	0.34486	63.578	63.381	63.726	0.32974					33	10	4	0	0	0	0.028763	3	26493	26447;26493;26545		89.427	70.17	1	3453100			8099	4227	3894	3916	10013;10014;10015	10014					0.010795885765219282
GMYIFLHTV	9	Unmodified	_GMYIFLHTV_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7827636599541	2	540.78097	1079.54739	2.9527	0.0015968	-0.38014	-0.00020557	2.5725	0.0013912	540.7807795061035	61.964	0.50664	63.382	63.145	63.652	1.4177					28	15	2	0	0	0	0.01705	3	26027	25951;25989;26027		101.72	69.416	1	8965700			8100	4227	3894	3916	10016;10017;10018	10018					0.010795885765219282
GMYIFLHTV	9	Unmodified	_GMYIFLHTV_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7828246951103	2	540.78097	1079.54739	2.2426	0.0012127	0.67505	0.00036505	2.9176	0.0015778	540.7812181454558	61.327	0.62969	63.284	63.028	63.657	1.9571					42	19	3	0	0	0	0.028763	2	25727	25727;25766		89.427	66.278	1	8795600			8101	4227	3894	3916	10019;10020	10019					0.010795885765219282
GMYVFLHAV	9	Unmodified	_GMYVFLHAV_					0	0	0		ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1403076052666	2	518.767863	1035.52117	2.3506	0.0012194	0.089072	4.6208E-05	2.4397	0.0012656	518.7673847626488	60.584	0.15788	60.912	60.792	60.949	0.32809					7	4	2	0	0	0	0.116	1	25374	25374		9.3474	2.9933	1	465800			8102	2380	3895	3917	10021	10021					0.004833194050661405
GNDDFGHTIE	10	Unmodified	_GNDDFGHTIE_					0	0	0			REV__nc|ENSG00000142606|Q495T6-3|MMEL1	REV__nc|ENSG00000142606|Q495T6-3|MMEL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7338134646416	2	552.73326	1103.45197	2.4511	0.0013548	0.30961	0.00017113	2.7607	0.0015259	552.7330748507584	84.596	0.33781	86.192	86.033	86.371	1.5962					25	10	3	0	0	0	0.82659	1	35453	35453		9.3831	0	1	3510600	+		8103	10182	3896	3918	10022	10022					-0.09562093080785417
GNDVDFFD	8	Unmodified	_GNDVDFFD_					0	0	0		nc|ENSG00000076716|O75487-2|GPC4;ENSG00000076716|ENST00000370828|GPC4	nc|ENSG00000076716|O75487-2|GPC4	nc|ENSG00000076716|O75487-2|GPC4	MSMS	GG20161007_CRH_Patient100_A02_02	2	310.1272765994072	3	310.127619	927.361027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.57	1	100.65	100.15	101.15	0.072716								0	0	0	1.0178	1	42106	42106		1.4819	0.51963	1				8104	949	3897	3919	10023	10023					-0.10555937058279596
GNGDCDCGECV	11	Unmodified	_GNGDCDCGECV_					0	0	0		ENSG00000115221|ENST00000283249|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1627685427666	2	536.162441	1070.31033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2401	1	7.8673	7.3673	8.3673	0.62713								0	0	0	0.63775	1	2995	2995		0.26902	0.26902	1				8105	1904	3898	3920	10024	10024					-0.22201293761440866
GNIMKIRPVN	10	Unmodified	_GNIMKIRPVN_					0	0	0		tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.3316528201103	2	571.32915	1140.64375	2.2647	0.0012939	1.8302	0.0010456	4.0949	0.0023395	571.3299637942055	88.422	0.45456	88.422	88.119	88.574	0					34	14	3	0	0	0	0.88022	1	36965	36965		3.5965	0.31518	1	2661300			8106	16089	3899	3921	10025	10025					0.07905156136507685
GNIMKIRPVN	10	Unmodified	_GNIMKIRPVN_					0	0	0		tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3325683474541	2	571.32915	1140.64375	2.4905	0.0014229	3.6315	0.0020748	6.122	0.0034977	571.3308156708798	88.248	0.36931	88.483	88.322	88.691	0.23471					27	11	3	0	0	0	0.88022	1	37038	37038		3.5965	0.31518	1	3086400			8107	16089	3899	3921	10026	10026					0.07905156136507685
GNIMKIRPVN	10	Unmodified	_GNIMKIRPVN_					0	0	0		tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	571.32915	1140.64375	4.6843	0.0026763	5.0029	0.0028583	9.6872	0.0055346	571.3320870307065	87.562	0.34007	88.654	88.49	88.831	1.0918	0.077285	0.0015896	NaN	3.5965	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1050500			8108	16089	3899	3921							0.07905156136507685
GNIMKIRPVN	10	Unmodified	_GNIMKIRPVN_					0	0	0		tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	tr|A0A553SG01|A0A553SG01_NIACIInorganicphosphatetransporterOS=NialliacirculansOX=1397GN=CEQ21_09820PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	571.32915	1140.64375	4.7033	0.0026871	4.5627	0.0026068	9.266	0.0052939	571.3313680715121	87.254	0.33826	88.749	88.581	88.919	1.4953	0.17223	0.0010867	NaN	3.5965	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1116200			8109	16089	3899	3921							0.07905156136507685
GNINAVHLK	9	Unmodified	_GNINAVHLK_					0	0	0		ENST00000510885.2_1_4:57460626-57460989:+|nuORF	ENST00000510885.2_1_4:57460626-57460989:+|nuORF	ENST00000510885.2_1_4:57460626-57460989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2798644900322	2	483.279983	964.545414	2.5868	0.0012502	-3.1917	-0.0015425	-0.60489	-0.00029233	483.2784402268643	77.933	0.45296	79.213	78.982	79.435	1.2809					35	14	3	0	0	0	0.77526	1	32680	32680		4.3292	2.0265	1	5020200			8110	7030	3900	3922	10027	10027					0.06172295882947765
GNIVFVLK	8	Unmodified	_GNIVFVLK_					0	0	0		nc|ENSG00000116701|P19878-2|NCF2;nc|ENSG00000116701|P19878-4|NCF2;nc|ENSG00000116701|P19878-3|NCF2;ENSG00000116701|ENST00000367535|NCF2	nc|ENSG00000116701|P19878-2|NCF2	nc|ENSG00000116701|P19878-2|NCF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.2778808474541	2	445.278921	888.543289	0.98124	0.00043693	-3.0626	-0.0013637	-2.0814	-0.00092679	445.277580905669	107.8	0.17526	107.8	107.72	107.89	0					26	9	4	0	0	0	0.89176	1	46295	46295		0.79363	0	1	75870000			8111	1982	3901	3923	10028	10028					0.0945586714512956
GNKQHKTLGAE	11	Unmodified	_GNKQHKTLGAE_					0	0	0		ENSG00000163617|ENST00000295878|CCDC191;nc|ENSG00000163617|Q8NCU4-2|CCDC191;ENST00000460813.5_1_3:113723412-113755878:-|nuORF	ENSG00000163617|ENST00000295878|CCDC191	ENSG00000163617|ENST00000295878|CCDC191	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.8152953982353	2	591.814919	1181.61528	0.33361	0.00019743	0.56777	0.00033602	0.90138	0.00053345	591.8150790232851	16.997	0.3602	18.3	18.112	18.472	1.3023					27	11	4	0	0	0	0.66268	1	7094	7094		19.362	0.10495	1	3242800			8112	3702	3902	3924	10029	10029					0.03174129760918731
GNRILPVL	8	Unmodified	_GNRILPVL_					0	0	0		tr|A0A7D6VNL6|A0A7D6VNL6_9CLOTAcyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13080PE=4SV=1	tr|A0A7D6VNL6|A0A7D6VNL6_9CLOTAcyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13080PE=4SV=1	tr|A0A7D6VNL6|A0A7D6VNL6_9CLOTAcyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2841369509697	2	441.281995	880.549437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.37	1	107.53	107.03	108.03	0.15781								0	0	0	1.0178	1	46171	46171		2.5775	0	1				8113	16739	3903	3925	10030	10030					0.10438385376664883
GNRQIQIK	8	Unmodified	_GNRQIQIK_					0	0	0		ENST00000565516.5_1_16:71898855-71913932:-|nuORF;ENST00000563827.5_1_16:71901919-71917343:-|nuORF;ENST00000565601.5_2_16:71901919-71917197:-|nuORF;ENST00000568322.5_1_16:71901919-71918589:-|nuORF;ENST00000562985.5_1_16:71901919-71918510:-|nuORF;ENST00000568961.5_1_16:71901919-71917908:-|nuORF;ENST00000313565.10_1_16:71898855-71918020:-|nuORF	ENST00000565516.5_1_16:71898855-71913932:-|nuORF	ENST00000565516.5_1_16:71898855-71913932:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.7860595583916	2	478.785433	955.556313	2.1649	0.0010365	-0.42093	-0.00020153	1.7439	0.00083497	478.78511205098243	74.98	0.43968	74.98	74.745	75.185	0					39	13	4	0	0	0	0.89008	1	31207	31207		2.5775	0.27475	1	8706400			8114	5815	3904	3926	10031	10031					0.07675698257241947
GNRRRKRPR	9	Unmodified	_GNRRRKRPR_					0	0	0			REV__nc|ENSG00000133193|Q969W3|VCF1	REV__nc|ENSG00000133193|Q969W3|VCF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2507202029228	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.476	1	32.476	31.976	32.976	0								0	0	0	0.42693	1	13606	13606		0.26902	0	1		+		8115	9873	3905	3927	10032	10032					0.13866287788118825
GNRRRKRPR	9	Unmodified	_GNRRRKRPR_					0	0	0			REV__nc|ENSG00000133193|Q969W3|VCF1	REV__nc|ENSG00000133193|Q969W3|VCF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2506591677666	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.376	1	31.667	31.167	32.167	0.29086								0	0	0	0.42693	1	13170	13170		0.26902	0	1		+		8116	9873	3905	3927	10033	10033					0.13866287788118825
GNRRRKRPR	9	Unmodified	_GNRRRKRPR_					0	0	0			REV__nc|ENSG00000133193|Q969W3|VCF1	REV__nc|ENSG00000133193|Q969W3|VCF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2512695193291	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.924	1	55.325	54.825	55.825	1.4005								0	0	0	0.42693	1	22572	22572		2.4985	0	1		+		8117	9873	3905	3927	10034	10034					0.13866287788118825
GNRRRKRPR	9	Unmodified	_GNRRRKRPR_					0	0	0			REV__nc|ENSG00000133193|Q969W3|VCF1	REV__nc|ENSG00000133193|Q969W3|VCF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2518188357353	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.302	1	32.117	31.617	32.617	1.8151								0	0	0	0.42693	1	12703	12703		0.26902	0	1		+		8118	9873	3905	3927	10035	10035					0.13866287788118825
GNRSEKST	8	Unmodified	_GNRSEKST_					0	0	0			REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	878.4361450076103	1	878.432635	877.425358	2.8014	0.0024608	1.4429	0.0012675	4.2443	0.0037283	878.4339869144602	104.82	0.094742	104.88	104.83	104.93	0.056801					13	4	4	0	0	0	0.89051	1	44294	44294		2.3027	0.4585	1	163850000	+		8119	12878	3906	3928	10036	10036					-0.01825737181468412
GNRSEKST	8	Unmodified	_GNRSEKST_					0	0	0			REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	878.4363891482353	1	878.432635	877.425358	3.1409	0.002759	1.5245	0.0013391	4.6653	0.0040982	878.4343228413452	104.74	0.12895	104.91	104.87	105	0.1731					17	6	5	0	0	0	0.89051	1	44394	44394		2.3027	0.4585	1	118400000	+		8120	12878	3906	3928	10037	10037					-0.01825737181468412
GNRSEKST	8	Unmodified	_GNRSEKST_					0	0	0			REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	878.432635	877.425358	2.8014	0.0024608	1.4429	0.0012675	4.2443	0.0037283	878.4339869144602	104.82	0.094742	104.88	104.83	104.93	0.056801	-0.016741	-0.00024604	NaN	2.3027	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	163850000	+		8121	12878	3906	3928							-0.01825737181468412
GNRSEKST	8	Unmodified	_GNRSEKST_					0	0	0			REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	REV__ENST00000400109.2_1_13:19879246-19879522:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	878.432635	877.425358	3.1409	0.002759	1.5245	0.0013391	4.6653	0.0040982	878.4343228413452	104.74	0.12895	104.91	104.87	105	0.1731	0.014307	-0.00017435	NaN	2.3027	17	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	118400000	+		8122	12878	3906	3928							-0.01825737181468412
GNRVGKRV	8	Unmodified	_GNRVGKRV_					0	0	0		AOC2|p.E509K|1|0.42|ENSG00000131480|chr17:42846151-42846151|G/A|missense_variant	AOC2|p.E509K|1|0.42|ENSG00000131480|chr17:42846151-42846151|G/A|missense_variant	AOC2|p.E509K|1|0.42|ENSG00000131480|chr17:42846151-42846151|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2734252810478	2	443.272493	884.530432	1.9507	0.00086467	0.52554	0.00023296	2.4762	0.0010976	443.27258903239255	68.914	0.59289	69.237	68.876	69.469	0.32223					48	18	4	0	0	0	0.89008	1	28849	28849		2.5775	0.27475	1	10679000			8123	66	3907	3929	10038	10038					0.08354848805606707
GNSKLNIVPKK	11	Unmodified	_GNSKLNIVPKK_					0	0	0			REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3712036013603	2	599.36933	1196.72411	3.1985	0.0019171	-1.4838	-0.00088933	1.7147	0.0010277	599.3683033185495	107.42	0.13438	107.58	107.51	107.64	0.15781					11	6	2	0	0	0	1.0174	1	46209	46209		2.7352	0.23671	1	12645000	+		8124	14399	3908	3930	10039	10039					0.13361340731171367
GNSKLNIVPKK	11	Unmodified	_GNSKLNIVPKK_					0	0	0			REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	599.36933	1196.72411	3.1985	0.0019171	-1.4838	-0.00088933	1.7147	0.0010277	599.3683033185495	107.42	0.13438	107.58	107.51	107.64	0.15781	0.0073895	0.00053433	NaN	2.7352	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12645000	+		8125	14399	3908	3930							0.13361340731171367
GNSKLNIVPKK	11	Unmodified	_GNSKLNIVPKK_					0	0	0			REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	REV__nc|ENSG00000088970|Q2M2Z5-4|KIZ	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	599.36933	1196.72411	3.2914	0.0019728	-2.5307	-0.0015168	0.76078	0.00045599	599.367390748929	107.41	0.13447	107.57	107.49	107.62	0.15795	-0.0073895	-0.0007206	NaN	2.7352	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7335100	+		8126	14399	3908	3930							0.13361340731171367
GNVAQMRCRQK	11	Unmodified	_GNVAQMRCRQK_					0	0	0			REV__ENST00000564224.1_1_9:34664535-34664784:-|nuORF	REV__ENST00000564224.1_1_9:34664535-34664784:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.888774	1289.64449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1786	1	1.1786	0.67862	1.6786	0								0	0	0	0.63775	1	484	484		0.094841	0	1		+		8127	13920	3909	3931	10040	10040					0.011256275138748606
GNVLGRPR	8	Unmodified	_GNVLGRPR_					0	0	0		ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.7599059939384	2	434.759218	867.503883	1.0567	0.00045943	0.20501	8.9128E-05	1.2617	0.00054856	434.7592833629648	69.063	0.62156	69.063	68.737	69.358	0					50	19	4	0	0	0	0.89008	1	28815	28815		2.5775	0.27475	1	17095000			8128	7417	3910	3932	10041	10041					0.06483159914284897
GNVLGRPR	8	Unmodified	_GNVLGRPR_					0	0	0		ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7600280642509	2	434.759218	867.503883	1.8739	0.0008147	0.38887	0.00016906	2.2628	0.00098377	434.75929391937945	68.908	0.62457	69.23	68.844	69.469	0.32224					50	19	4	0	0	0	0.89008	1	28787	28787		2.5775	0.27475	1	16388000			8129	7417	3910	3932	10042	10042					0.06483159914284897
GNVLGRPR	8	Unmodified	_GNVLGRPR_					0	0	0		ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	ENST00000577698.1_1_17:66243842-66243974:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7600280642509	2	434.759218	867.503883	1.7353	0.00075444	0.13578	5.9031E-05	1.8711	0.00081347	434.7593541692662	67.545	0.58881	69.415	69.147	69.736	1.87					54	18	4	0	0	0	0.89008	2	28351	28351;28391		2.5775	2.5775	1	9838000			8130	7417	3910	3932	10043;10044	10043					0.06483159914284897
GNVVRVPH	8	Unmodified	_GNVVRVPH_					0	0	0			REV__ENST00000527401.5_1_11:45957138-45987102:-|nuORF	REV__ENST00000527401.5_1_11:45957138-45987102:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2529479861259	2	439.253769	876.492984	2.8428	0.0012487	-2.6245	-0.0011528	0.21826	9.5872E-05	439.25201476063216	72.378	0.45927	73.708	73.423	73.883	1.3298					36	14	3	0	0	0	0.89008	1	30372	30372		2.5775	0.27475	1	5635700	+		8131	9935	3911	3933	10045	10045					0.04979757540002083
GPAAGKPL	8	Unmodified	_GPAAGKPL_					0	0	0		CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	710.4192993044853	1	710.419551	709.412274	2.303	0.0016361	-3.0462	-0.0021641	-0.74321	-0.00052799	710.4171969375559	60.54	0.56599	60.54	60.199	60.765	0					29	17	2	0	0	0	0.89176	2	25210	25210;25301		0.79363	0	1	1459200			8132	133	3912	3934	10046;10047	10046					0.04594476497072719
GPAAGKPL	8	Unmodified	_GPAAGKPL_					0	0	0		CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.4186889529228	1	710.419551	709.412274	1.9925	0.0014155	-2.1257	-0.0015101	-0.13317	-9.461E-05	710.4174152347438	59.334	0.58071	60.753	60.409	60.99	1.4196					27	18	2	0	0	0	0.89176	1	24914	24914		0.79363	0	1	2696800			8133	133	3912	3934	10048	10048					0.04594476497072719
GPAAGKPL	8	Unmodified	_GPAAGKPL_					0	0	0		CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.4189330935478	1	710.419551	709.412274	2.5246	0.0017935	-3.0822	-0.0021897	-0.55761	-0.00039613	710.4171645355646	60.469	0.49185	61.889	61.597	62.089	1.4196					32	15	3	0	0	0	0.89176	1	25365	25365		0.79363	0	1	4564800			8134	133	3912	3934	10049	10049					0.04594476497072719
GPAAGKPL	8	Unmodified	_GPAAGKPL_					0	0	0		CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.4194213747978	1	710.419551	709.412274	1.6918	0.0012019	-1.7055	-0.0012116	-0.013704	-9.7355E-06	710.4178956949002	58.908	0.64467	60.877	60.487	61.131	1.969					34	20	2	0	0	0	0.89176	1	24677	24677		0.79363	0	1	1796100			8135	133	3912	3934	10050	10050					0.04594476497072719
GPAAGKPL	8	Unmodified	_GPAAGKPL_					0	0	0		CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	CDC25B|p.E193Gfs*42|1|0.12|ENSG00000101224|chr20:3800861-3800861|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.4188110232353	1	710.419551	709.412274	2.4686	0.0017537	-2.2771	-0.0016177	0.19148	0.00013603	710.417763393994	60.058	0.40676	62.024	61.854	62.261	1.9655					23	12	3	0	0	0	0.89176	1	25190	25190		0.79363	0	1	4733400			8136	133	3912	3934	10051	10051					0.04594476497072719
GPAEGDGG	8	Unmodified	_GPAEGDGG_					0	0	0			REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.2684203982353	1	659.26311	658.255833	3.5235	0.0023229	1.3901	0.00091643	4.9135	0.0032393	659.2647454528822	97.589	0.23529	97.817	97.716	97.951	0.22776					21	7	5	0	0	0	0.89176	1	41045	41045		0.79363	0	1	668380000	+		8137	12173	3913	3935	10052	10052					-0.08696433464024267
GPAEGDGG	8	Unmodified	_GPAEGDGG_					0	0	0			REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	REV__ENST00000258111.4_1_12:70760360-70760789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.2666503787041	1	659.26311	658.255833	3.1582	0.0020821	0.88175	0.00058131	4.04	0.0026634	659.2642770574172	97.454	0.23989	97.76	97.654	97.894	0.3062					23	7	4	0	0	0	0.89176	1	40985	40985		0.79363	0	1	455090000	+		8138	12173	3913	3935	10053	10053					-0.08696433464024267
GPAKNAVSLKG	11	Unmodified	_GPAKNAVSLKG_					0	0	0			REV__ENSG00000135472|ENST00000320634|FAIM2	REV__ENSG00000135472|ENST00000320634|FAIM2	MSMS	GG20161007_CRH_Patient100_A02_02	2	521.3093139529228	2	521.306198	1040.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.36	1	103.42	102.92	103.92	0.059502								0	0	0	0.63775	1	43339	43339		1.0715	0.27783	1		+		8139	9942	3914	3936	10054	10054					0.07916834225898128
GPAPAAARP	9	Unmodified	_GPAPAAARP_					0	0	0		nc|ENSG00000129993|O75081-2|CBFA2T3;nc|ENSG00000129993|O75081-4|CBFA2T3;ENSG00000129993|ENST00000268679|CBFA2T3	nc|ENSG00000129993|O75081-2|CBFA2T3	nc|ENSG00000129993|O75081-2|CBFA2T3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2269164919853	2	404.22722	806.439886	-0.041264	-1.668E-05	0.16994	6.8693E-05	0.12867	5.2013E-05	404.22724318838715	11.639	0.25386	12.401	12.225	12.479	0.76165					10	7	2	0	0	0	0.15478	1	4837	4837		38.151	0	1	1783400			8140	2413	3915	3937	10055	10055					0.028923797573156662
GPAPAAARP	9	Unmodified	_GPAPAAARP_					0	0	0		nc|ENSG00000129993|O75081-2|CBFA2T3;nc|ENSG00000129993|O75081-4|CBFA2T3;ENSG00000129993|ENST00000268679|CBFA2T3	nc|ENSG00000129993|O75081-2|CBFA2T3	nc|ENSG00000129993|O75081-2|CBFA2T3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	404.22722	806.439886	-0.66648	-0.00026941	1.3605	0.00054997	0.69406	0.00028056	404.22761430979114	11.738	0.25194	12.432	12.259	12.511	0.69396	0.015794	0.00034219	NaN	38.151	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1579900			8141	2413	3915	3937							0.028923797573156662
GPARSCAKEK	10	Unmodified	_GPARSCAKEK_					0	0	0			REV__ENST00000418888.5_2_2:170441100-170441295:+|nuORF	REV__ENST00000418888.5_2_2:170441100-170441295:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	523.2751342654228	2	523.774208	1045.53386	1.8865	0.0009881	-1.5733	-0.00082408	0.31316	0.00016403	523.7747817040771	51.479	0.65053	51.804	51.57	52.22	0.32553					33	20	2	0	0	0	0.12484	1	21575	21575		11.64	0	1	752850	+		8142	12962	3916	3938	10056	10056					0.012917307972884373
GPCCCPCCSCC	11	Unmodified	_GPCCCPCCSCC_					0	0	0		ENST00000608825.1_3_7:99954396-99956429:+|nuORF;ENST00000609309.2_3_7:99955758-99956429:+|nuORF;ENST00000452089.5_3_7:99950889-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.0851318240166	3	360.085235	1077.23388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.821	1	40.821	40.321	41.321	0								0	0	0	0.63775	1	17099	17099		0	0	1				8143	6616	3917	3939	10057	10057					-0.301651714499485
GPCCCPCCSCC	11	Unmodified	_GPCCCPCCSCC_					0	0	0		ENST00000608825.1_3_7:99954396-99956429:+|nuORF;ENST00000609309.2_3_7:99955758-99956429:+|nuORF;ENST00000452089.5_3_7:99950889-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.0858337283134	3	360.085235	1077.23388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.224	1	41.224	40.724	41.724	0								0	0	0	0.63775	1	17263	17263		0	0	1				8144	6616	3917	3939	10058	10058					-0.301651714499485
GPCCCPCCSCC	11	Unmodified	_GPCCCPCCSCC_					0	0	0		ENST00000608825.1_3_7:99954396-99956429:+|nuORF;ENST00000609309.2_3_7:99955758-99956429:+|nuORF;ENST00000452089.5_3_7:99950889-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.0858947634697	3	360.085235	1077.23388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.417	1	41.417	40.917	41.917	0								0	0	0	0.63775	1	17341	17341		0	0	1				8145	6616	3917	3939	10059	10059					-0.301651714499485
GPCCCPCCSCC	11	Unmodified	_GPCCCPCCSCC_					0	0	0		ENST00000608825.1_3_7:99954396-99956429:+|nuORF;ENST00000609309.2_3_7:99955758-99956429:+|nuORF;ENST00000452089.5_3_7:99950889-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.0862914919853	3	360.085235	1077.23388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.631	1	41.631	41.131	42.131	0								0	0	0	0.63775	1	17428	17428		0	0	1				8146	6616	3917	3939	10060	10060					-0.301651714499485
GPCCCPCCSCC	11	Unmodified	_GPCCCPCCSCC_					0	0	0		ENST00000608825.1_3_7:99954396-99956429:+|nuORF;ENST00000609309.2_3_7:99955758-99956429:+|nuORF;ENST00000452089.5_3_7:99950889-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	ENST00000608825.1_3_7:99954396-99956429:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.0868102908134	3	360.085235	1077.23388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.362	1	41.678	41.178	42.178	0.31683								0	0	0	0.63775	1	17375	17375		0	0	1				8147	6616	3917	3939	10061	10061					-0.301651714499485
GPDGEEEEDE	10	Unmodified	_GPDGEEEEDE_					0	0	0			REV__ENSG00000130037|ENST00000252321|KCNA5	REV__ENSG00000130037|ENST00000252321|KCNA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.1925536990166	2	553.19383	1104.37311	0.98739	0.00054622	-0.02181	-1.2065E-05	0.96558	0.00053416	553.1928345089474	33.291	0.30544	33.291	33.147	33.452	0					16	9	2	0	0	0	0.81324	2	13932	13932;13994		10.824	6.4947	1	1242300	+		8148	9763	3918	3940	10062;10063	10062					-0.1749040989641344
GPEERFKIK	9	Unmodified	_GPEERFKIK_					0	0	0			REV__ENSG00000112245|ENST00000626021|PTP4A1	REV__ENSG00000112245|ENST00000626021|PTP4A1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	552.4839965701103	2	552.314023	1102.61349	2.7157	0.0014999	-1.6435	-0.00090774	1.0722	0.0005922	552.3132859606891	108.48	0.17579	108.53	108.42	108.6	0.050644					19	10	3	0	0	0	0.11923	1	46606	46606		1.6526	0.96225	1	23727000	+		8149	9359	3919	3941	10064	10064					0.06629120742945815
GPEERFKIK	9	Unmodified	_GPEERFKIK_					0	0	0			REV__ENSG00000112245|ENST00000626021|PTP4A1	REV__ENSG00000112245|ENST00000626021|PTP4A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	552.314023	1102.61349	0.8237	0.00045494	-0.51633	-0.00028518	0.30737	0.00016977	552.3139981091296	108.5	0.18224	108.5	108.4	108.58	0	-0.013389	0.00044272	NaN	1.6526	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8765300	+		8150	9359	3919	3941							0.06629120742945815
GPFPAGGG	8	Unmodified	_GPFPAGGG_					0	0	0			REV__ENSG00000162627|ENST00000306121|SNX7	REV__ENSG00000162627|ENST00000306121|SNX7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	659.3157836794853	1	659.314751	658.307475	1.4869	0.00098031	1.0491	0.00069166	2.5359	0.001672	659.3151281492878	103.94	0.095139	103.94	103.88	103.97	0					10	4	3	0	0	0	0.89198	1	43760	43760		0	0	1	41421000	+		8151	10652	3920	3942	10065	10065					-0.0353464497945879
GPGAHGGV	8	Unmodified	_GPGAHGGV_					0	0	0		ENST00000528368.2_1_11:119209668-119209890:-|nuORF	ENST00000528368.2_1_11:119209668-119209890:-|nuORF	ENST00000528368.2_1_11:119209668-119209890:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	651.6567870974541	1	651.320899	650.313623	2.6307	0.0017134	0.66761	0.00043483	3.2983	0.0021482	651.3221572658667	89.632	0.94897	89.632	89.146	90.095	0					38	29	2	0	0	0	2.3239	1	37590	37590		2.8892	0	1	725520			8152	7147	3921	3943	10066	10066					-0.02552126747946204
GPGELVSGSNG	11	Unmodified	_GPGELVSGSNG_					0	0	0			REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.9238159060478	2	487.232896	972.451239	1.7052	0.00083081	-2.1956	-0.0010698	-0.49041	-0.00023895	487.23128156217314	71.721	0.31207	73.062	72.936	73.248	1.3415					17	9	2	0	0	0	0.14538	1	30123	30123		16.149	7.5558	1	1827900	+		8153	10681	3922	3944	10067	10067					-0.03608887729842536
GPGELVSGSNG	11	Unmodified	_GPGELVSGSNG_					0	0	0			REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	487.232896	972.451239	2.8626	0.0013947	-1.4197	-0.00069173	1.4429	0.00070302	487.2318696437928	72.976	0.22318	73.3	73.179	73.403	0.32494	0.13158	0.00074967	NaN	16.149	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455420	+		8154	10681	3922	3944							-0.03608887729842536
GPGHAAAA	8	Unmodified	_GPGHAAAA_					0	0	0		ENST00000371712.3_1_9:139333425-139334268:-|nuORF	ENST00000371712.3_1_9:139333425-139334268:-|nuORF	ENST00000371712.3_1_9:139333425-139334268:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3237182497978	1	651.320899	650.313623	1.8672	0.0012162	-0.66055	-0.00043023	1.2067	0.00078595	651.3212371427129	70.492	0.91625	70.492	70.056	70.972	0					50	29	2	0	0	0	0.89176	1	29508	29508		0.79363	0	1	1876100			8155	6128	3923	3945	10068	10068					-0.025521267479689413
GPGPGGGE	8	Unmodified	_GPGPGGGE_					0	0	0			REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1387817263603	2	314.140279	626.266004	-1.619	-0.00050861	-4.2398	-0.0013319	-5.8589	-0.0018405	314.1386555751306	84.355	0.50256	84.355	84.086	84.589	0					31	15	3	0	0	0	0.89198	2	35120	35120;35173		0	0	1	923370	+		8156	12072	3924	3946	10069;10070	10069					-0.062078257388179736
GPGPGGGE	8	Unmodified	_GPGPGGGE_					0	0	0			REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	314.140279	626.266004	-1.619	-0.00050861	-4.2398	-0.0013319	-5.8589	-0.0018405	314.1386555751306	84.355	0.50256	84.355	84.086	84.589	0	-0.078739	0.00078173	NaN	0	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	923370	+		8157	12072	3924	3946							-0.062078257388179736
GPGPGGGE	8	Unmodified	_GPGPGGGE_					0	0	0			REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	314.140279	626.266004	1.764	0.00055413	-7.1529	-0.002247	-5.3889	-0.0016929	314.13770882333216	84.16	0.47337	84.421	84.156	84.629	0.26083	-0.012076	-0.0010485	NaN	0	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	686850	+		8158	12072	3924	3946							-0.062078257388179736
GPGPGGGE	8	Unmodified	_GPGPGGGE_					0	0	0			REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	REV__ENST00000216802.9_1_14:24615845-24615968:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	314.140279	626.266004	0.9174	0.00028819	-5.0788	-0.0015954	-4.1614	-0.0013072	314.138437230703	83.336	0.47469	84.524	84.262	84.736	1.1879	0.090816	0.00025464	NaN	0	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	799400	+		8159	12072	3924	3946							-0.062078257388179736
GPGPGGGR	8	Unmodified	_GPGPGGGR_					0	0	0		ENSG00000125878|ENST00000246080|TCF15	REV__ENST00000604729.5_1_10:75545341-75545701:+|nuORF	REV__ENST00000604729.5_1_10:75545341-75545701:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	654.3834716677666	1	654.331799	653.324522	3.2296	0.0021132	-2.5598	-0.0016749	0.66985	0.0004383	654.3299702375613	106.4	0.30595	106.56	106.4	106.71	0.16174					25	14	2	0	0	0	2.3239	1	45526	45526		0	0	1	3689400			8160	2289	3925	3947	10071	10071					-0.016007243736794408
GPGPGKPA	8	Unmodified	_GPGPGKPA_					0	0	0		TAF4|p.K971Ffs*103|1|0.04|ENSG00000130699|chr20:61998986-61998987|-/GAGGGTGAAG|frameshift_variant;ENSG00000130699|ENST00000252996|TAF4	TAF4|p.K971Ffs*103|1|0.04|ENSG00000130699|chr20:61998986-61998987|-/GAGGGTGAAG|frameshift_variant	TAF4|p.K971Ffs*103|1|0.04|ENSG00000130699|chr20:61998986-61998987|-/GAGGGTGAAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	340.6897460818291	2	340.689939	679.365324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.104	1	14.964	14.464	15.464	0.85972								0	0	0	1.0178	1	5849	5849		2.5775	0	1				8161	2450	3926	3948	10072	10072					0.01281616945937003
GPGQLVFGR	9	Unmodified	_GPGQLVFGR_					0	0	0		ENST00000296504.3_1_4:174292140-174292233:+|nuORF	ENST00000296504.3_1_4:174292140-174292233:+|nuORF	ENST00000296504.3_1_4:174292140-174292233:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	931.5257446169853	1	930.515577	929.5083	2.9028	0.0027011	-1.2552	-0.001168	1.6476	0.0015331	930.5137309747304	72.154	0.57843	73.964	73.62	74.198	1.8101					46	18	3	0	0	0	0.11478	1	30182	30182		44.407	10.305	1	11350000			8162	5735	3927	3949	10073	10073					0.04072624337186426
GPGRLGPVLS	10	Unmodified	_GPGRLGPVLS_					0	0	0			REV__ENST00000491971.5_1_1:249149922-249151721:-|nuORF	REV__ENST00000491971.5_1_1:249149922-249151721:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1910583376884	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.508	1	61.477	60.977	61.977	1.969								0	0	0	0.66151	1	24968	24968		1.9064	0.42447	1		+		8163	11014	3928	3950	10074	10074					0.07245180025711306
GPILFVPRTVL	11	Unmodified	_GPILFVPRTVL_					0	0	0			REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6937438845634	4	303.693221	1210.74378	-0.084505	-2.5663E-05	2.2371	0.00067941	2.1526	0.00065374	303.6938641817456	22.618	0.58895	23.833	23.609	24.198	1.2145					48	18	4	0	0	0	1.0191	1	9408	9408		2.6312	0.34846	1	4147800	+		8164	13824	3929	3951	10075	10075					0.14683716741933495
GPILFVPRTVL	11	Unmodified	_GPILFVPRTVL_					0	0	0			REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6936218142509	4	303.693221	1210.74378	0.11758	3.571E-05	1.6395	0.00049789	1.757	0.0005336	303.69368568503904	24.255	0.74282	25.496	24.928	25.67	1.241					83	23	4	0	0	0	1.0365	1	9994	9994		1.2148	0.14337	1	3548200	+		8165	13824	3929	3951	10076	10076					0.14683716741933495
GPILFVPRTVL	11	Unmodified	_GPILFVPRTVL_					0	0	0			REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.6934692263603	4	303.693221	1210.74378	-0.1925	-5.846E-05	1.2842	0.00039001	1.0917	0.00033155	303.69356837698035	21.716	1.2298	23.332	23.02	24.25	1.6158					94	40	3	0	0	0	1.0365	1	9041	9041		1.2148	1.2148	1	6484900	+		8166	13824	3929	3951	10077	10077					0.14683716741933495
GPILFVPRTVL	11	Unmodified	_GPILFVPRTVL_					0	0	0			REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	REV__ENST00000550078.2_2_1:203764919-203765303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.6936828494072	4	303.693221	1210.74378	-0.11669	-3.5439E-05	1.2728	0.00038653	1.1561	0.00035109	303.6935871462227	23.863	0.81911	25.547	24.934	25.753	1.6845					94	26	4	0	0	0	1.0191	1	9908	9908		2.6312	1.4164	1	3746200	+		8167	13824	3929	3951	10078	10078					0.14683716741933495
GPKATRRA	8	Unmodified	_GPKATRRA_					0	0	0		EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant;ENSG00000116903|ENST00000366645|EXOC8	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	428.7592346072197	2	428.759218	855.503883	2.3977	0.001028	-1.393	-0.00059727	1.0047	0.00043075	428.7584350107954	81.31	0.48492	81.6	81.369	81.854	0.29056					36	15	3	0	0	0	0.88663	1	34028	34028		4.756	0	1	7014600			8168	1991	3930	3952	10079	10079					0.07035159914266842
GPKATRRA	8	Unmodified	_GPKATRRA_					0	0	0		EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant;ENSG00000116903|ENST00000366645|EXOC8	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	428.759218	855.503883	1.3069	0.00056036	-0.75044	-0.00032176	0.55648	0.0002386	428.75868345445247	81.524	0.50581	81.524	81.288	81.794	0	-0.12423	-0.00012736	NaN	4.756	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6863500			8169	1991	3930	3952							0.07035159914266842
GPKATRRA	8	Unmodified	_GPKATRRA_					0	0	0		EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant;ENSG00000116903|ENST00000366645|EXOC8	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	EXOC8|p.G422Efs*18|1|0.24|ENSG00000116903|chr1:231336481-231336482|-/TCAAAGTTACTTACCCCACAACTTTTCATCT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	428.759218	855.503883	1.2115	0.00051946	0.44043	0.00018884	1.652	0.0007083	428.75925633030613	80.071	0.51861	81.788	81.506	82.025	1.7167	0.14016	0.00089383	NaN	4.756	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3170300			8170	1991	3930	3952							0.07035159914266842
GPKFMAKV	8	Unmodified	_GPKFMAKV_					0	0	0			REV__ENST00000585624.1_1_19:38169626-38177384:-|nuORF	REV__ENST00000585624.1_1_19:38169626-38177384:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.2517883181572	2	439.251849	876.489145	1.3543	0.00059488	0.014444	6.3447E-06	1.3687	0.00060122	439.25151564437147	73.476	0.51829	73.476	73.216	73.734	0					41	16	3	0	0	0	0.89051	1	30610	30610		2.3027	1.5091	1	15482000	+		8171	14026	3931	3953	10080	10080					0.04595951721910296
GPKFMAKV	8	Unmodified	_GPKFMAKV_					0	0	0			REV__ENST00000585624.1_1_19:38169626-38177384:-|nuORF	REV__ENST00000585624.1_1_19:38169626-38177384:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.2525207400322	2	439.251849	876.489145	2.6624	0.0011695	-0.17469	-7.6732E-05	2.4877	0.0010927	439.2514146861175	73.223	0.47614	73.548	73.34	73.816	0.32494					39	15	3	0	0	0	0.89051	1	30666	30666		2.3027	0	1	18127000	+		8172	14026	3931	3953	10081	10081					0.04595951721910296
GPKKRYLQE	9	Unmodified	_GPKKRYLQE_					0	0	0			REV__nc|ENSG00000070159|P26045-3|PTPN3	REV__nc|ENSG00000070159|P26045-3|PTPN3	MSMS	GG20161007_CRH_Patient100_A02_01	1	559.8217651247978	2	559.819473	1117.62439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.6	1	90.6	90.1	91.1	0								0	0	0	0.42693	1	37868	37868		0.52476	0	1		+		8173	8715	3932	3954	10082	10082					0.07028523117196528
GPKKTKRE	8	Unmodified	_GPKKTKRE_					0	0	0		nc|ENSG00000154767|Q01831-2|XPC;ENSG00000154767|ENST00000285021|XPC	nc|ENSG00000154767|Q01831-2|XPC	nc|ENSG00000154767|Q01831-2|XPC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2893859744072	2	472.287808	942.561064	2.4251	0.0011453	0.05505	2.6E-05	2.4801	0.0011713	472.28773622635293	78.785	1.0207	79.095	78.738	79.759	0.30933					85	32	5	0	0	0	0.89178	2	32866	32866;32915		0.69038	0	1	172350000			8174	3396	3933	3955	10083;10084	10083					0.0874858239999412
GPKKTKRE	8	Unmodified	_GPKKTKRE_					0	0	0		nc|ENSG00000154767|Q01831-2|XPC;ENSG00000154767|ENST00000285021|XPC	nc|ENSG00000154767|Q01831-2|XPC	nc|ENSG00000154767|Q01831-2|XPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2887756228447	2	472.287808	942.561064	2.6521	0.0012526	0.44423	0.0002098	3.0963	0.0014624	472.28789374237107	77.933	0.67142	79.213	78.823	79.495	1.2809					71	21	5	0	0	0	0.89178	3	32628	32628;32670;32721		0.69038	0	1	92817000			8175	3396	3933	3955	10085;10086;10087	10085					0.0874858239999412
GPKLKPKKR	9	Unmodified	_GPKLKPKKR_					0	0	0			REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2426330447197	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.546	1	22.779	22.279	23.279	0.23306								0	0	0	0.42693	1	9395	9395		0.26902	0.033176	1		+		8176	10937	3934	3956	10088	10088					0.1792600049311659
GPKLKPKKR	9	Unmodified	_GPKLKPKKR_					0	0	0			REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2417785525322	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.808	1	23.041	22.541	23.541	0.23306								0	0	0	0.42693	1	9510	9510		0.26902	0.033176	1		+		8177	10937	3934	3956	10089	10089					0.1792600049311659
GPKLKPKKR	9	Unmodified	_GPKLKPKKR_					0	0	0			REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	REV__ENST00000512000.1_1_5:176794318-176794990:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2435790896416	3	351.241471	1050.70258	0.051373	1.8044E-05	3.1328	0.0011004	3.1842	0.0011184	351.24256174002704	21.728	1.1454	23.344	23.02	24.165	1.6158					55	37	3	0	0	0	0.85206	2	8948	8948;9247		0.26902	0.033176	1	1320600	+		8178	10937	3934	3956	10090;10091	10090					0.1792600049311659
GPKLKYTS	8	Unmodified	_GPKLKYTS_					0	0	0			REV__NIPSNAP1|p.R188S|1|0.24|ENSG00000184117|chr22:29561521-29561521|C/G|missense_variant	REV__NIPSNAP1|p.R188S|1|0.24|ENSG00000184117|chr22:29561521-29561521|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	447.2585632205009	2	447.258185	892.501818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.07	1	108.22	107.72	108.72	0.15781								0	0	0	1.0178	1	46640	46640		2.3027	0	1		+		8179	14583	3935	3957	10092	10092					0.05126686385801804
GPKLKYTS	8	Unmodified	_GPKLKYTS_					0	0	0			REV__NIPSNAP1|p.R188S|1|0.24|ENSG00000184117|chr22:29561521-29561521|C/G|missense_variant	REV__NIPSNAP1|p.R188S|1|0.24|ENSG00000184117|chr22:29561521-29561521|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	447.2588989138603	2	447.258185	892.501818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.08	1	108.23	107.73	108.73	0.15795								0	0	0	1.0178	1	46585	46585		2.3027	0	1		+		8180	14583	3935	3957	10093	10093					0.05126686385801804
GPKNLTIG	8	Unmodified	_GPKNLTIG_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	400.2384826540947	2	400.237253	798.459953	-0.30309	-0.00012131	1.433	0.00057356	1.13	0.00045225	400.23792735945204	107.77	0.17513	107.77	107.67	107.84	0					17	9	2	0	0	0	0.89178	1	46270	46270		0.69038	0	1	42767000	+		8181	10246	3936	3958	10094	10094					0.05266130697293647
GPKNLTIG	8	Unmodified	_GPKNLTIG_					0	0	0			REV__nc|ENSG00000144369|Q6P995-2|FAM171B	REV__nc|ENSG00000144369|Q6P995-2|FAM171B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	400.237253	798.459953	-0.30309	-0.00012131	1.433	0.00057356	1.13	0.00045225	400.23792735945204	107.77	0.17513	107.77	107.67	107.84	0	0	0	NaN	0.69038	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42767000	+		8182	10246	3936	3958							0.05266130697293647
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3975097537041	2	677.396744	1352.77894	2.4756	0.001677	-2.707	-0.0018337	-0.23144	-0.00015678	677.3949411725933	83.276	1.3837	83.276	82.493	83.876	0					99	44	3	0	0	0	1.0362	2	34757	34757;34891		1.3295	0.92882	1	1972200			8183	16348	3937	3959	10095;10096	10095					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9346496462822	3	451.933588	1352.77894	2.4766	0.0011192	-1.1377	-0.00051414	1.3389	0.0006051	451.933098551888	85.54	1.3865	85.54	84.716	86.103	0					111	43	3	0	0	0	1.0362	2	35416	35416;35553		0.45452	0.12525	1	3321100			8184	16348	3937	3959	10097;10098	10097					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3959228396416	2	677.396744	1352.77894	2.8727	0.001946	-3.1127	-0.0021085	-0.23992	-0.00016252	677.3943835412952	86.11	0.7575	86.11	85.884	86.641	0					57	24	3	0	0	0	1.0362	2	35850	35850;36048		1.3295	0.92882	1	1252200			8185	16348	3937	3959	10099;10100	10099					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.8968383669853	2	677.396744	1352.77894	2.2271	0.0015086	-2.3905	-0.0016193	-0.16341	-0.00011069	677.3951106076005	83.067	1.4121	83.337	82.634	84.046	0.27029					101	45	3	0	0	0	1.0362	6	34573	34573;34623;34679;34779;34831;34884		1.3295	0.92882	1	1706000			8186	16348	3937	3959	10101;10102;10103;10104;10105;10106	10101					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3968994021416	2	677.396744	1352.77894	2.4766	0.0016776	-1.3145	-0.00089044	1.1621	0.00078719	677.3955617934563	84.715	0.47845	84.976	84.726	85.204	0.26083					36	14	3	0	0	0	1.0362	2	35403	35403;35519		1.3295	0.92882	1	2097100			8187	16348	3937	3959	10107;10108	10107					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.8987304568291	2	677.396744	1352.77894	2.4956	0.0016905	-2.3177	-0.00157	0.17788	0.0001205	677.3949932474914	85.234	0.81022	85.487	85.133	85.943	0.25227					86	25	4	0	0	0	1.0362	5	35571	35571;35620;35677;35741;35794		1.3295	0.92882	1	5092100			8188	16348	3937	3959	10109;10110;10111;10112;10113	10109					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9349853396416	3	451.933588	1352.77894	3.1235	0.0014116	-1.3979	-0.00063178	1.7255	0.00077982	451.9330334707084	85.264	1.3791	85.516	84.814	86.193	0.25227					106	43	3	0	0	0	1.0362	2	35641	35641;35743		0.45452	0.31463	1	3258700			8189	16348	3937	3959	10114;10115	10114					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3978759646416	2	677.396744	1352.77894	3.4726	0.0023523	-2.1095	-0.001429	1.3631	0.00092335	677.3954511194552	82.437	1.1918	83.649	82.728	83.92	1.2125					59	37	2	0	0	0	1.0362	1	34486	34486		1.3295	0.25807	1	2089600			8190	16348	3937	3959	10116	10116					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9347411990166	3	451.933588	1352.77894	2.1825	0.00098634	-0.37083	-0.00016759	1.8117	0.00081876	451.93377716668147	84.549	1.375	85.708	85.118	86.493	1.159					84	45	3	0	0	0	1.0362	1	35482	35482		0.45452	0.29519	1	4016500			8191	16348	3937	3959	10117	10117					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3953735232353	2	677.396744	1352.77894	3.2691	0.0022145	-1.3515	-0.0009155	1.9176	0.001299	677.3956887162482	82.145	0.97081	83.815	83.11	84.081	1.67					46	30	2	0	0	0	1.0362	1	34399	34399		1.3295	0.92882	1	1365200			8192	16348	3937	3959	10118	10118					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9334899783134	3	451.933588	1352.77894	2.412	0.0010901	-1.4291	-0.00064585	0.9829	0.0004442	451.93304441998373	84.325	1.0391	85.921	85.18	86.219	1.5962					54	33	3	0	0	0	1.0362	1	35314	35314		0.45452	0.31463	1	3153200			8193	16348	3937	3959	10119	10119					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3960449099541	2	677.396744	1352.77894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.657	1	85.295	84.795	85.795	1.6379								0	0	0	0.63775	1	35089	35089		1.3295	0.72803	1				8194	16348	3937	3959	10120	10120					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3973266482353	2	677.396744	1352.77894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.436	1	86.032	85.532	86.532	1.5962								0	0	0	0.63775	1	35414	35414		1.3295	0	1				8195	16348	3937	3959	10121	10121					0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	677.396744	1352.77894	2.5913	0.0017553	-2.0045	-0.0013578	0.58681	0.0003975	677.3950001596285	84.07	0.49205	84.07	83.876	84.368	0	0.086247	-0.0011566	NaN	1.3295	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749950			8196	16348	3937	3959							0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	677.396744	1352.77894	2.3612	0.0015995	-0.95618	-0.00064772	1.405	0.00095175	677.3961024538366	83.881	0.65582	84.141	84.006	84.662	0.26083	0.15732	0.0002636	NaN	1.3295	29	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842160			8197	16348	3937	3959							0.11665772322430712
GPKRDRRLWLG	11	Unmodified	_GPKRDRRLWLG_					0	0	0		tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	tr|A0A553SLR2|A0A553SLR2_NIACIalpha-L-rhamnosidaseOS=NialliacirculansOX=1397GN=CEQ21_21125PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	677.396744	1352.77894	2.8625	0.0019391	3.7081	0.0025119	6.5707	0.004451	677.4004632152312	82.697	0.31311	83.91	83.795	84.108	1.2125	-0.074649	0.0065828	NaN	1.3295	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	746680			8198	16348	3937	3959							0.11665772322430712
GPKRVPVF	8	Unmodified	_GPKRVPVF_					0	0	0			REV__tr|A0A7D6VNZ0|A0A7D6VNZ0_9CLOTAdeninephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=aptPE=3SV=1	REV__tr|A0A7D6VNZ0|A0A7D6VNZ0_9CLOTAdeninephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=aptPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2762634158134	2	450.276712	898.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.967	1	76.749	76.249	77.249	1.7817								0	0	0	1.0178	1	31445	31445		2.5775	1.7838	1		+		8199	15347	3938	3960	10122	10122					0.08554402722222676
GPKSLKHLF	9	Unmodified	_GPKSLKHLF_					0	0	0		ENSG00000134061|ENST00000256447|CD180	ENSG00000134061|ENST00000256447|CD180	ENSG00000134061|ENST00000256447|CD180	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8746520876884	3	342.874677	1025.6022	-0.73935	-0.0002535	-0.056115	-1.924E-05	-0.79546	-0.00027274	342.87453964330683	33.266	0.2902	34.545	34.335	34.625	1.2782					32	16	3	0	0	0	0.80869	1	13906	13906		2.9952	2.9952	1	10913000			8200	2593	3939	3961	10123	10123					0.0904234343945518
GPKVRPGSRRR	11	Unmodified	_GPKVRPGSRRR_					0	0	0			REV__ENST00000366769.7_1_1:227505620-227505818:-|nuORF	REV__ENST00000366769.7_1_1:227505620-227505818:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5932189822197	3	422.593566	1264.75887	0.38648	0.00016332	-1.8449	-0.00077966	-1.4585	-0.00061634	422.5928765355281	34.084	0.26704	35.359	35.211	35.478	1.2746					38	27	2	0	0	0	0.99899	1	14322	14322		3.8459	0.25885	1	11289000	+		8201	12613	3940	3962	10124	10124					0.13708021382490188
GPLGASPGLMI	11	Unmodified	_GPLGASPGLMI_					0	0	0		ENST00000357590.9_2_11:118900045-118901265:-|nuORF;ENST00000330775.9_2_11:118900045-118901566:-|nuORF;ENST00000534384.1_1_11:118900045-118900639:-|nuORF;ENST00000525102.5_1_11:118900045-118901045:-|nuORF;ENST00000538950.5_1_11:118899072-118901566:-|nuORF;ENST00000532085.1_1_11:118900045-118900432:-|nuORF	ENST00000357590.9_2_11:118900045-118901265:-|nuORF	ENST00000357590.9_2_11:118900045-118901265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.556811511517	1	1012.54958	1011.5423	3.7671	0.0038144	2.9336	0.0029704	6.7008	0.0067849	1012.5520216877118	91.972	0.49654	92.908	92.617	93.114	0.93623					31	15	3	0	0	0	0.20108	1	38770	38770		39.957	3.4912	1	5856000			8202	5890	3941	3963	10125	10125					0.036992847139231344
GPPKKLFNK	9	Unmodified	_GPPKKLFNK_					0	0	0		ENST00000479665.5_2_3:28365438-28365531:-|nuORF	ENST00000479665.5_2_3:28365438-28365531:-|nuORF	ENST00000479665.5_2_3:28365438-28365531:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	515.2764770388603	2	514.816202	1027.61785	2.2507	0.0011587	-3.354	-0.0017267	-1.1033	-0.000568	514.8153475544916	59.196	0.22057	59.196	59.037	59.257	0					9	6	2	0	0	0	0.08828	1	24640	24640		28.487	14.581	1	603750			8203	6810	3942	3964	10126	10126					0.10514629956514909
GPPPPPRLVP	10	Unmodified	_GPPPPPRLVP_					0	0	0		ENSG00000185085|ENST00000330574|INTS5;INTS5|p.L462P|1|0.36|ENSG00000185085|chr11:62648695-62648695|A/G|missense_variant	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8748046755791	3	342.874677	1025.6022	1.0272	0.0003522	0.26034	8.9263E-05	1.2875	0.00044146	342.8746265208564	36.497	0.72542	36.799	36.569	37.295	0.30197					125	48	4	0	0	0	0.88031	1	15442	15442		3.5871	0.59182	1	15443000			8204	4733	3943	3965	10127	10127					0.0904234343945518
GPRKAQRLRGH	11	Unmodified	_GPRKAQRLRGH_					0	0	0		ENST00000278559.7_1_11:76796081-76823747:+|nuORF;ENST00000456580.6_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3898803591728	2	638.378886	1274.74322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.92	1	104.08	103.58	104.58	0.16055								0	0	0	0.63775	1	43925	43925		1.1933	0	1				8205	5693	3944	3966	10128	10128					0.11683734865414408
GPRLSRWRREF	11	Unmodified	_GPRLSRWRREF_					0	0	0			REV__nc|ENSG00000181409|Q6ZMQ8-3|AATK	REV__nc|ENSG00000181409|Q6ZMQ8-3|AATK	MSMS	GG20161007_CRH_Patient100_W632_01	3	730.4050170779228	2	730.405101	1458.79565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.559	1	91.54	91.04	92.04	0.98157								0	0	0	0.63775	1	38152	38152		0.35063	0	1		+		8206	11321	3945	3967	10129	10129					0.08460273208402214
GPRTRVFWLSI	11	Unmodified	_GPRTRVFWLSI_					0	0	0			REV__ENST00000507044.1_1_4:1243919-1243994:+|nuORF	REV__ENST00000507044.1_1_4:1243919-1243994:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	666.3831664919853	2	666.382771	1330.75099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.89	1	104.05	103.55	104.55	0.16055								0	0	0	0.63775	1	43905	43905		2.4985	0.84587	1		+		8207	13542	3946	3968	10130	10130					0.09884449342371227
GPSSGNWD	8	Unmodified	_GPSSGNWD_					0	0	0		ENST00000395900.1_1_11:32462613-32462721:+|nuORF	ENST00000395900.1_1_11:32462613-32462721:+|nuORF	ENST00000395900.1_1_11:32462613-32462721:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	410.1661865115166	2	410.167025	818.319496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.82	1	110.86	110.36	111.36	0.047043								0	0	0	1.0178	1	47796	47796		0.69038	0	1				8208	6296	3947	3969	10131	10131					-0.0969307302694915
GPSSVEDIK	9	Unmodified	_GPSSVEDIK_					0	0	0		nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;FBXW11-NPM1|2|fusion;FBXW11-NPM1|1|fusion	nc|ENSG00000181163|P06748-3|NPM1	nc|ENSG00000181163|P06748-3|NPM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.2386962771416	2	466.24019	930.465826	0.25982	0.00012114	-2.0419	-0.00095199	-1.782	-0.00083086	466.23914037053584	14.333	0.16755	15.103	15.002	15.17	0.76937					14	6	3	0	0	0	0.032536	1	5950	5950		83.429	39.57	1	4229600			8209	4570	3948	3970	10132	10132					-0.0021881558171799043
GPSSVEDIK	9	Unmodified	_GPSSVEDIK_					0	0	0		nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;FBXW11-NPM1|2|fusion;FBXW11-NPM1|1|fusion	nc|ENSG00000181163|P06748-3|NPM1	nc|ENSG00000181163|P06748-3|NPM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.2391845583916	2	466.24019	930.465826	0.49407	0.00023036	-2.1785	-0.0010157	-1.6844	-0.00078533	466.23892831559795	14.257	0.15764	15.154	15.074	15.232	0.89664					31	11	4	0	0	0	0.039278	1	5909	5909		76.825	32.966	1	3669900			8210	4570	3948	3970	10133	10133					-0.0021881558171799043
GPVHQENYKVL	11	Unmodified	_GPVHQENYKVL_					0	0	0			REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	642.3425170779228	2	642.340769	1282.66699	1.2677	0.00081429	1.7398	0.0011175	3.0075	0.0019318	642.3421193242947	23.464	0.27318	23.464	23.352	23.625	0					20	8	3	0	0	0	0.71484	1	9820	9820		17.113	0	1	1536000	+		8211	11651	3949	3971	10134	10134					0.036958734547852146
GPVLCAAC	8	Unmodified	_GPVLCAAC_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100;nc|ENSG00000185504|Q0VG06-3|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MSMS	GG20161007_CRH_Patient100_W632_02	4	367.1718627810478	2	367.17221	732.329867	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.756	1	50.733	50.233	51.233	1.9772								0	0	0	1.0178	1	20423	20423		0.79363	0	1				8212	4749	3950	3972	10135	10135					-0.047005048977325714
GPYDSNQPHK	10	Unmodified	_GPYDSNQPHK_					0	0	0		ENSG00000266338|ENST00000581897|NBPF15	ENSG00000266338|ENST00000581897|NBPF15	ENSG00000266338|ENST00000581897|NBPF15	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5117370486259	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.832	1	26.832	26.332	27.332	0								0	0	0	0.59099	1	11216	11216		21.59	1.9642	1				8213	5435	3951	3973	10136	10136					-0.04986107572926812
GPYDSNQPHK	10	Unmodified	_GPYDSNQPHK_					0	0	0		ENSG00000266338|ENST00000581897|NBPF15	ENSG00000266338|ENST00000581897|NBPF15	ENSG00000266338|ENST00000581897|NBPF15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5118896365166	3	381.512355	1141.51524	0.31982	0.00012202	-2.9958	-0.0011429	-2.676	-0.0010209	381.51152916285906	24.47	2.0064	26.154	24.719	26.726	1.6845					110	66	3	0	0	0	0.86677	1	9661	9661		5.0475	0.15051	1	754460			8214	5435	3951	3973	10137	10137					-0.04986107572926812
GQACRRVVH	9	Unmodified	_GQACRRVVH_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2761718630791	2	513.274709	1024.53487	1.0167	0.00052185	0.87124	0.00044718	1.8879	0.00096903	513.2752581202762	30.981	0.28693	32.262	32.151	32.438	1.2813					12	8	2	0	0	0	0.61249	1	13035	13035		10.824	0	1	618670			8215	4945	3952	3974	10138	10138					0.023579899568630935
GQEARRGTA	9	Unmodified	_GQEARRGTA_					0	0	0		ENST00000601438.2_1_19:47724796-47724889:-|nuORF	ENST00000601438.2_1_19:47724796-47724889:-|nuORF	ENST00000601438.2_1_19:47724796-47724889:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.4905883669853	1	945.486067	944.478791	2.0768	0.0019636	2.5644	0.0024246	4.6412	0.0043882	945.4888646568169	48.854	0.37057	50.831	50.637	51.008	1.9772					24	11	3	0	0	0	0.63129	1	20531	20531		10.074	2.1638	1	1848200			8216	7543	3953	3975	10139	10139					0.004330603210519257
GQFDEESPV	9	Unmodified	_GQFDEESPV_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.7915222048759	2	504.219454	1006.42436	2.4289	0.0012247	-2.1644	-0.0010914	0.26448	0.00013335	504.21822784187736	63.611	0.52612	65.024	64.785	65.311	1.4134					35	16	3	0	0	0	0.1006	1	26664	26664		21.747	2.4897	1	3732400	+		8217	9112	3954	3976	10140	10140					-0.07859996341039732
GQFDEESPV	9	Unmodified	_GQFDEESPV_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.7911865115166	2	504.219454	1006.42436	2.0977	0.0010577	-1.8658	-0.00094076	0.23195	0.00011696	504.2185131978782	63.041	0.55852	64.985	64.721	65.279	1.9444					43	17	3	0	0	0	0.1006	1	26443	26443		21.747	2.4897	1	3912700	+		8218	9112	3954	3976	10141	10141					-0.07859996341039732
GQFSTFCSM	9	Unmodified	_GQFSTFCSM_					0	0	0			REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	REV__ENST00000577198.5_1_17:26603697-26633156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2054931521416	2	504.201696	1006.38884	3.6903	0.0018606	2.8174	0.0014205	6.5077	0.0032812	504.2035808579229	72.976	0.50072	74.306	74.069	74.569	1.3298					47	15	5	0	0	0	0.42097	1	30656	30656		20.454	0	1	7644600	+		8219	13986	3955	3977	10142	10142					-0.11410073394051778
GQGETLRVR	9	Unmodified	_GQGETLRVR_					0	0	0			REV__MGA|p.D2061Vfs*3|1|0.09|ENSG00000174197|chr15:41749788-41749789|-/T|frameshift_variant	REV__MGA|p.D2061Vfs*3|1|0.09|ENSG00000174197|chr15:41749788-41749789|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2885619997978	2	508.285797	1014.55704	1.7513	0.00089016	3.8328	0.0019481	5.5841	0.0028383	508.28813319835047	46.36	0.19044	48.33	48.251	48.441	1.9703					7	5	2	0	0	0	0.53525	1	19432	19432		13.906	1.3745	1	556700	+		8220	11118	3956	3978	10143	10143					0.050344929062816846
GQGWGPDA	8	Unmodified	_GQGWGPDA_					0	0	0		ENSG00000125650|ENST00000245810|PSPN	ENSG00000125650|ENST00000245810|PSPN	ENSG00000125650|ENST00000245810|PSPN	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.1711608767509	2	394.17211	786.329667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.81	1	110.85	110.35	111.35	0.047043								0	0	0	1.0178	1	47793	47793		0	0	1				8221	2267	3957	3979	10144	10144					-0.07204465301731489
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2681457400322	2	485.266207	968.517862	2.4724	0.0011998	0.04961	2.4074E-05	2.522	0.0012238	485.2659448349651	51.322	0.27915	51.65	51.511	51.791	0.32824					14	8	2	0	0	0	0.39927	2	21535	21483;21535		20.454	3.1841	1	1368700			8222	2035	3958	3980	10145;10146	10146					0.032343478320512986
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.5255615115166	1	969.525138	968.517862	2.3249	0.002254	0.43412	0.00042089	2.759	0.0026749	969.5256411179365	50.184	0.28751	51.576	51.419	51.706	1.3911					14	8	2	0	0	0	0.20244	1	20971	20971		32.786	5.1569	1	900400			8223	2035	3958	3980	10147	10147					0.032343478320512986
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2672912478447	2	485.266207	968.517862	2.7856	0.0013518	0.98264	0.00047684	3.7682	0.0018286	485.2665124116481	50.182	0.38203	51.573	51.355	51.737	1.3911					28	11	3	0	0	0	0.033504	2	20978	20978;21017		81.89	31.957	1	2832000			8224	2035	3958	3980	10148;10149	10148					0.032343478320512986
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2669860720634	2	485.266207	968.517862	1.6271	0.00078959	1.8863	0.00091538	3.5135	0.001705	485.2669918192443	49.685	0.43888	51.663	51.381	51.819	1.9772					30	13	3	0	0	0	0.044893	2	20804	20749;20804		71.922	28.064	1	2851100			8225	2035	3958	3980	10150;10151	10151					0.032343478320512986
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	485.266207	968.517862	2.0246	0.00098248	-0.55467	-0.00026916	1.4699	0.00071331	485.2658032648242	51.698	0.31463	51.698	51.539	51.854	0	0.052065	-0.001503	NaN	81.89	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570870			8226	2035	3958	3980							0.032343478320512986
GQIEVVPEV	9	Unmodified	_GQIEVVPEV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	969.525138	968.517862	1.5373	0.0014904	1.8345	0.0017786	3.3718	0.003269	969.5272707314352	49.64	0.28377	51.617	51.443	51.727	1.9772	0.020972	0.0003795	NaN	32.786	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1112200			8227	2035	3958	3980							0.032343478320512986
GQIVDHDLD	9	Unmodified	_GQIVDHDLD_					0	0	0		LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant;nc|ENSG00000167419|P22079-2|LPO;ENSG00000167419|ENST00000262290|LPO;ENST00000580346.5_1_17:56316099-56327997:+|nuORF;ENST00000578403.5_1_17:56316099-56327997:+|nuORF	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	LPO|p.L516Tfs*13|1|0.09|ENSG00000167419|chr17:58266178-58266179|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2423889040947	2	506.240721	1010.46689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.807	1	18.807	18.307	19.307	0								0	0	0	0.21022	1	7817	7817		25.399	12.868	1				8228	3967	3959	3981	10152	10152					-0.03792601212808222
GQKIAKVLLFY	11	Unmodified	_GQKIAKVLLFY_					0	0	0		Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|60|2|sense	Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|60|2|sense	Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|60|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7000610232353	4	320.699775	1278.76999	1.3893	0.00044555	-0.59585	-0.00019109	0.79347	0.00025447	320.6997533231677	40.294	1.1013	42.157	41.987	43.089	1.8624					85	34	3	0	0	0	1.0224	1	16894	16894		2.4348	0.52841	1	190230000			8229	7601	3960	3982	10153	10153					0.14175985913402656
GQPEIFYTF	9	Unmodified	_GQPEIFYTF_					0	0	0		nc|ENSG00000164597|Q9UP83-3|COG5;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1101.524951159954	1	1101.52514	1100.51786	2.149	0.0023671	-0.52055	-0.0005734	1.6284	0.0017937	1101.5236269705936	71.064	0.50663	72.405	72.241	72.748	1.3415					38	16	3	0	0	0	0.053939	2	29794	29794;29841		66.457	22.598	1	3901600			8230	3783	3961	3983	10154;10155	10154					-0.02837652167977467
GQPEIFYTF	9	Unmodified	_GQPEIFYTF_					0	0	0		nc|ENSG00000164597|Q9UP83-3|COG5;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.2661010622978	2	551.266207	1100.51786	2.3393	0.0012896	-1.3827	-0.00076224	0.95662	0.00052735	551.2657757618437	71.064	0.6627	72.405	72.117	72.779	1.3415					55	21	3	0	0	0	0.063746	2	29818	29818;29866		62.573	28.47	1	10414000			8231	3783	3961	3983	10156;10157	10156					-0.02837652167977467
GQPEIFYTF	9	Unmodified	_GQPEIFYTF_					0	0	0		nc|ENSG00000164597|Q9UP83-3|COG5;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1101.526171863079	1	1101.52514	1100.51786	1.3087	0.0014415	-0.59249	-0.00065265	0.71617	0.00078888	1101.5231587434644	70.68	0.51159	72.518	72.26	72.772	1.8378					25	16	2	0	0	0	0.0069529	2	29662	29596;29662		114.65	62.381	1	2382500			8232	3783	3961	3983	10158;10159	10159					-0.02837652167977467
GQPEIFYTF	9	Unmodified	_GQPEIFYTF_					0	0	0		nc|ENSG00000164597|Q9UP83-3|COG5;ENSG00000164597|ENST00000297135|COG5;nc|ENSG00000164597|Q9UP83-1|COG5;nc|ENSG00000164597|Q9UP83|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	nc|ENSG00000164597|Q9UP83-3|COG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.2655517458916	2	551.266207	1100.51786	1.081	0.00059591	1.1425	0.00062984	2.2235	0.0012258	551.2665155174723	70.619	0.57349	72.457	72.291	72.864	1.8378					33	18	2	0	0	0	0.10473	3	29606	29606;29659;29726		47.749	13.347	1	6893200			8233	3783	3961	3983	10160;10161;10162	10160					-0.02837652167977467
GQPSLAVFL	9	Unmodified	_GQPSLAVFL_					0	0	0			REV__ENSG00000089597|ENST00000356638|GANAB	REV__ENSG00000089597|ENST00000356638|GANAB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	466.1717712283134	2	466.26601	930.517468	3.1692	0.0014777	-0.59254	-0.00027628	2.5767	0.0012014	466.2656461708592	73.614	0.85727	75.41	75.132	75.989	1.7962					38	27	2	0	0	0	0.11275	1	30960	30960		14.838	6.9281	1	1162700	+		8234	8886	3962	3984	10163	10163					0.049429729028588554
GQQQGLPR	8	Unmodified	_GQQQGLPR_					0	0	0		nc|ENSG00000211891|P01854|IGHE	nc|ENSG00000211891|P01854|IGHE	nc|ENSG00000211891|P01854|IGHE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2407409548759	2	442.240858	882.467164	1.5012	0.00066391	0.42839	0.00018945	1.9296	0.00085336	442.24093027017983	76.38	0.45601	76.38	76.073	76.529	0					32	14	3	0	0	0	0.89051	1	31852	31852		2.3027	0	1	10378000			8235	7993	3963	3985	10164	10164					0.021228632977113193
GQQSQRST	8	Unmodified	_GQQSQRST_					0	0	0		ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	ENSG00000184384|ENST00000524717|MAML2	MSMS	GG20161007_CRH_Patient100_A02_01	1	446.2174865603447	2	446.21758	890.420607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.16	1	105.16	104.66	105.66	0								0	0	0	1.0178	1	44570	44570		2.0598	0.40713	1				8236	4692	3964	3986	10165	10165					-0.028986213242433223
GQRQRHNK	8	Unmodified	_GQRQRHNK_					0	0	0			REV__ENST00000253401.10_1_X:62974200-62974368:-|nuORF	REV__ENST00000253401.10_1_X:62974200-62974368:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.8571349978447	3	341.856679	1022.54821	-1.3685	-0.00046782	3.2331	0.0011053	1.8646	0.00063744	341.8578305151052	13.077	0.15624	13.804	13.695	13.851	0.72639					6	4	2	0	0	0	0.88663	1	5441	5441		3.2813	0.78282	1	348760	+		8237	12150	3965	3987	10166	10166					0.03783564060461231
GQSFKGCYL	9	Unmodified	_GQSFKGCYL_					0	0	0			REV__tr|A0A7D6ZX28|A0A7D6ZX28_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10210PE=4SV=1	REV__tr|A0A7D6ZX28|A0A7D6ZX28_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10210PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.7419006228447	2	501.739302	1001.46405	2.3527	0.0011804	2.5084	0.0012586	4.861	0.002439	501.7408643909961	63.537	0.62184	64.95	64.753	65.375	1.4134					48	19	4	0	0	0	0.39927	1	26667	26667		20.454	1.0146	1	8260100	+		8238	15755	3966	3988	10167	10167					-0.036621478713072975
GQSFKGCYL	9	Unmodified	_GQSFKGCYL_					0	0	0			REV__tr|A0A7D6ZX28|A0A7D6ZX28_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10210PE=4SV=1	REV__tr|A0A7D6ZX28|A0A7D6ZX28_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10210PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7420226931572	2	501.739302	1001.46405	1.9725	0.00098967	2.6618	0.0013355	4.6343	0.0023252	501.7409596059806	63.068	0.81265	65.012	64.532	65.345	1.9444					62	25	4	0	0	0	0.39927	1	26480	26480		20.454	1.0146	1	6830800	+		8239	15755	3966	3988	10168	10168					-0.036621478713072975
GQSSLVLSK	9	Unmodified	_GQSSLVLSK_					0	0	0			REV__tr|A0A553ST72|A0A553ST72_NIACIYndJ-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_04470PE=4SV=1	REV__tr|A0A553ST72|A0A553ST72_NIACIYndJ-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_04470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	918.5265380740166	1	918.525473	917.518196	2.8089	0.00258	-1.3495	-0.0012396	1.4593	0.0013404	918.5241296655298	103.45	0.063293	103.51	103.46	103.52	0.059502					4	2	2	0	0	0	0.85068	1	43401	43401		0.45834	0	1	40532000	+		8240	15231	3967	3989	10169	10169					0.05613767551892579
GQTKKKVHSNI	11	Unmodified	_GQTKKKVHSNI_					0	0	0			REV__nc|ENSG00000170054|Q86WD7-5|SERPINA9	REV__nc|ENSG00000170054|Q86WD7-5|SERPINA9	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.3651611208916	2	620.362036	1238.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.49	103.99	104.99	0								0	0	0	0.63775	1	44106	44106		2.7352	0.89096	1		+		8241	10973	3968	3990	10170	10170					0.0997126858305819
GQWASVIRV	9	Unmodified	_GQWASVIRV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;nc|ENSG00000189091|Q15393-3|SF3B3;ENST00000562722.1_1_16:70597761-70599451:+|nuORF	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2890197634697	2	508.287808	1014.56106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.911	1	48.293	47.793	48.793	1.3825								0	0	0	0.27844	1	19646	19646		20.415	7.3721	1				8242	4895	3969	3991	10171	10171					0.05436582400000134
GRAEKRKH	8	Unmodified	_GRAEKRKH_					0	0	0		ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2900268435478	2	491.288674	980.562795	3.3755	0.0016584	0.77773	0.00038209	4.1533	0.0020405	491.2892234625077	96.817	0.28338	97.123	96.913	97.196	0.3062					16	8	2	0	0	0	0.8909	1	40722	40722		2.0598	0	1	1014000			8243	6930	3970	3992	10172	10172					0.07173636208608514
GRAEKRKH	8	Unmodified	_GRAEKRKH_					0	0	0		ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	491.288674	980.562795	1.295	0.0006362	-0.40878	-0.00020083	0.88619	0.00043538	491.2882734869111	97.003	0.18441	97.003	96.925	97.109	0	-0.052717	-0.00031794	NaN	2.0598	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	839860			8244	6930	3970	3992							0.07173636208608514
GRAEKRKH	8	Unmodified	_GRAEKRKH_					0	0	0		ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	ENST00000493960.6_2_3:56707735-56716751:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	491.288674	980.562795	3.4125	0.0016765	-0.99835	-0.00049048	2.4142	0.0011861	491.2880087639124	96.937	0.19261	97.042	96.878	97.07	0.105	-0.013948	-0.00089724	NaN	2.0598	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366970			8245	6930	3970	3992							0.07173636208608514
GRARLRLA	8	Unmodified	_GRARLRLA_					0	0	0			REV__ENST00000596105.2_1_19:18119032-18119587:+|nuORF	REV__ENST00000596105.2_1_19:18119032-18119587:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8643676638603	3	304.866515	911.577717	-2.9487	-0.00089897	-2.2464	-0.00068487	-5.1952	-0.0015838	304.86570738366015	25.306	0.95262	25.306	24.858	25.811	0					61	30	4	0	0	0	0.89187	1	10538	10538		0.40072	0	1	4970700	+		8246	9184	3971	3993	10173	10173					0.11839128076587713
GRDAPPRLW	9	Unmodified	_GRDAPPRLW_					0	0	0		nc|ENSG00000120318|Q8WWN8-2|ARAP3;ARAP3|p.M1385Dfs*25|1|0.05|ENSG00000120318|chr5:141654432-141654433|-/C|frameshift_variant;ENSG00000120318|ENST00000239440|ARAP3	nc|ENSG00000120318|Q8WWN8-2|ARAP3	nc|ENSG00000120318|Q8WWN8-2|ARAP3	MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2927123904228	2	534.290882	1066.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.67	1	105.83	105.33	106.33	0.15859								0	0	0	0.42693	1	45061	45061		1.8442	0	1				8247	71	3972	3994	10174	10174					0.03659100631512047
GRDRRRPRRAR	11	Unmodified	_GRDRRRPRRAR_					0	0	0			REV__ENST00000530151.5_1_11:47586908-47587052:-|nuORF	REV__ENST00000530151.5_1_11:47586908-47587052:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537109255791	4	363.721433	1450.85663	1.9242	0.00069987	-0.83465	-0.00030358	1.0895	0.00039629	363.7207088654881	65.08	0.25511	66.479	66.316	66.571	1.3989					10	7	2	0	0	0	0.14606	1	27315	27315		0.36667	0.27183	1	278300	+		8248	13698	3973	3995	10175	10175					0.14923223031200905
GRDSIKIT	8	Unmodified	_GRDSIKIT_					0	0	0			REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	889.5077392458916	1	889.510157	888.50288	2.9777	0.0026487	-3.8808	-0.003452	-0.90306	-0.00080328	889.5059515581133	106.95	0.090744	107.11	107.05	107.14	0.15781					5	3	2	0	0	0	0.8873	1	45905	45905		4.3292	0	1	16914000	+		8249	8489	3974	3996	10176	10176					0.05416900754698872
GRDSIKIT	8	Unmodified	_GRDSIKIT_					0	0	0			REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	889.510157	888.50288	2.9777	0.0026487	-3.8808	-0.003452	-0.90306	-0.00080328	889.5059515581133	106.95	0.090744	107.11	107.05	107.14	0.15781	0.0071001	0.0014457	NaN	4.3292	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16914000	+		8250	8489	3974	3996							0.05416900754698872
GRDSIKIT	8	Unmodified	_GRDSIKIT_					0	0	0			REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	889.510157	888.50288	3.1054	0.0027623	-6.2559	-0.0055647	-3.1505	-0.0028024	889.5039542240135	106.93	0.08725	107.1	107.04	107.13	0.16174	-0.0071001	-0.000667	NaN	4.3292	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9710200	+		8251	8489	3974	3996							0.05416900754698872
GRDSRLHRLR	10	Unmodified	_GRDSRLHRLR_					0	0	0		ENST00000526402.1_1_11:43543828-43544716:+|nuORF	ENST00000526402.1_1_11:43543828-43544716:+|nuORF	ENST00000526402.1_1_11:43543828-43544716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5834838747978	3	422.581438	1264.72248	1.157	0.00048893	2.1314	0.00090068	3.2884	0.0013896	422.582359893431	81.718	1.5156	81.718	80.977	82.493	0					71	49	3	0	0	0	0.89803	1	34291	34291		1.5923	1.2256	1	2207800			8252	7125	3975	3997	10177	10177					0.1007114448577795
GRDSRLHRLR	10	Unmodified	_GRDSRLHRLR_					0	0	0		ENST00000526402.1_1_11:43543828-43544716:+|nuORF	ENST00000526402.1_1_11:43543828-43544716:+|nuORF	ENST00000526402.1_1_11:43543828-43544716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5844299197197	3	422.581438	1264.72248	2.3578	0.00099636	1.2851	0.00054305	3.6429	0.0015394	422.5820980837992	81.569	1.164	81.849	81.11	82.274	0.2802					65	37	2	0	0	0	0.89803	2	34049	34049;34119		0.56317	0.15491	1	1152200			8253	7125	3975	3997	10178;10179	10178					0.1007114448577795
GRGARKPG	8	Unmodified	_GRGARKPG_					0	0	0		nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7384521365166	2	399.738286	797.462019	0.079915	3.1945E-05	1.1161	0.00044616	1.196	0.00047811	399.7387640923591	68.605	0.53471	68.605	68.359	68.893	0					47	16	4	0	0	0	0.89051	1	28508	28508		2.3027	0	1	14166000			8254	7952	3976	3998	10180	10180					0.055186042257560075
GRGARKPG	8	Unmodified	_GRGARKPG_					0	0	0		nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7392150759697	2	399.738286	797.462019	1.4665	0.00058622	0.13014	5.2023E-05	1.5967	0.00063824	399.73848943590565	66.526	0.88463	67.915	67.299	68.184	1.3888					59	28	3	0	0	0	0.89051	1	27888	27888		2.3027	0	1	4450800			8255	7952	3976	3998	10181	10181					0.055186042257560075
GRGGGKGK	8	Unmodified	_GRGGGKGK_					0	0	0		ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	358.7132751345634	2	358.711737	715.40892	0.10999	3.9456E-05	2.475	0.00088782	2.585	0.00092727	358.7127125037179	16.252	0.7557	16.382	16.025	16.781	0.13022					38	26	2	0	0	0	0.88587	2	6712	6712;6750		5.2307	2.6532	1	1230800			8256	2456	3977	3999	10182;10183	10182					0.0398322644309701
GRGRDMEWRK	10	Unmodified	_GRGRDMEWRK_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878051638603	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.008	1	16.834	16.334	17.334	0.82643								0	0	0	0.66227	1	6655	6655		0.62683	0	1		+		8257	9803	3978	4000	10184	10184					0.007887007315048322
GRGRLPKK	8	Unmodified	_GRGRLPKK_					0	0	0			REV__ENSG00000116544|ENST00000373347|DLGAP3	REV__ENSG00000116544|ENST00000373347|DLGAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3006164431572	2	456.29851	910.582468	3.4717	0.0015841	1.3757	0.00062772	4.8473	0.0022118	456.29931911919067	107.68	0.91288	107.84	107.08	107.99	0.15795					91	46	6	0	0	0	0.89178	1	46280	46280		0.69038	0.69038	1	9888700000	+		8258	9475	3979	4001	10185	10185					0.1236001221936931
GRGVRSLKT	9	Unmodified	_GRGVRSLKT_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2014953494072	3	325.201564	972.582862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.1	1	101.1	100.6	101.6	0								0	0	0	0.42693	1	42326	42326		0.26902	0	1		+		8259	11110	3980	4002	10186	10186					0.09547387148563757
GRGVSGSG	8	Unmodified	_GRGVSGSG_					0	0	0			REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.6729614138603	2	338.672277	675.330001	-1.5103	-0.00051151	3.4279	0.0011609	1.9176	0.00064943	338.67332342852626	76.984	1.1596	76.984	76.373	77.533	0					77	36	4	0	0	0	0.88055	2	32082	32082;32136		8.5933	0	1	2788900	+		8260	12051	3981	4003	10187;10188	10187					-0.020650455818440605
GRGVSGSG	8	Unmodified	_GRGVSGSG_					0	0	0			REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.6727477908134	2	338.672277	675.330001	1.6305	0.0005522	0.70032	0.00023718	2.3308	0.00078938	338.67228682145486	76.832	1.0641	77.149	76.479	77.543	0.31653					67	33	3	0	0	0	0.88055	2	32073	32073;32174		8.5933	0	1	3451000	+		8261	12051	3981	4003	10189;10190	10189					-0.020650455818440605
GRGVSGSG	8	Unmodified	_GRGVSGSG_					0	0	0			REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	REV__ENST00000409016.8_1_2:99061347-99061425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.6727783083916	2	338.672277	675.330001	1.2173	0.00041225	0.17199	5.8247E-05	1.3892	0.0004705	338.672476824883	75.91	1.4111	77.203	76.634	78.045	1.2938					130	45	5	0	0	0	0.88055	5	31799	31799;31850;31889;31929;31998		8.5933	0	1	56369000	+		8262	12051	3981	4003	10191;10192;10193;10194;10195	10191					-0.020650455818440605
GRHRLGHVF	9	Unmodified	_GRHRLGHVF_					0	0	0		ENST00000491118.1_1_10:70138969-70141006:-|nuORF	ENST00000491118.1_1_10:70138969-70141006:-|nuORF	ENST00000491118.1_1_10:70138969-70141006:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2061340212822	3	360.20542	1077.59443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.486	1	58.901	58.401	59.401	1.4145								0	0	0	0.42693	1	24100	24100		1.0715	0	1				8263	6908	3982	4004	10196	10196					0.05873628962535804
GRHRRRRRWW	10	Unmodified	_GRHRRRRRWW_					0	0	0			REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2929870486259	3	507.959354	1520.85623	1.457	0.0007401	-2.7488	-0.0013963	-1.2918	-0.00065617	508.2923787234602	112.86	0.16445	112.86	112.78	112.94	0					6	4	2	0	0	0	0.89803	1	48785	48785		0.69767	0.19171	1	2302700	+		8264	12667	3983	4005	10197	10197					0.1166384810198906
GRILLIVLMLY	11	Unmodified	_GRILLIVLMLY_					0	0	0			REV__ENST00000542825.5_1_12:306559-308154:-|nuORF	REV__ENST00000542825.5_1_12:306559-308154:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	651.9114257693291	2	652.412152	1302.80975	1.4966	0.00097642	0.026734	1.7442E-05	1.5234	0.00099386	652.4122572770825	107.38	0.12236	107.38	107.31	107.43	0					8	5	2	0	0	0	0.14606	1	46023	46023		1.4819	0	1	12115000	+		8265	9318	3984	4006	10198	10198					0.17045789592475558
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2697021365166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3884	1	1.3884	0.88845	1.8884	0								0	0	0	1.0178	1	570	570		0.69038	0	1		+		8266	9948	3985	4007	10199	10199					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2676879763603	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7041	1	1.7041	1.2041	2.2041	0								0	0	0	1.0178	1	699	699		0.69038	0	1		+		8267	9948	3985	4007	10200	10200					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2679321169853	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0278	1	2.0278	1.5278	2.5278	0								0	0	0	1.0178	1	831	831		0.69038	0	1		+		8268	9948	3985	4007	10201	10201					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2689697146416	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3777	1	2.3777	1.8777	2.8777	0								0	0	0	1.0178	1	975	975		0.69038	0	1		+		8269	9948	3985	4007	10202	10202					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2682067751884	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1632	1	3.1632	2.6632	3.6632	0								0	0	0	1.0178	1	1298	1298		0.69038	0	1		+		8270	9948	3985	4007	10203	10203					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2695495486259	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.508	1	3.508	3.008	4.008	0								0	0	0	1.0178	1	1440	1440		0.69038	0	1		+		8271	9948	3985	4007	10204	10204					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2674743533134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7443	1	3.7443	3.2443	4.2443	0								0	0	0	1.0178	1	1538	1538		0.69038	0	1		+		8272	9948	3985	4007	10205	10205					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2701904177666	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1464	1	4.1464	3.6464	4.6464	0								0	0	0	1.0178	1	1705	1705		0.69038	0	1		+		8273	9948	3985	4007	10206	10206					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2673522830009	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7053	1	4.7053	4.2053	5.2053	0								0	0	0	1.0178	1	1933	1933		0.69038	0	1		+		8274	9948	3985	4007	10207	10207					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2680541872978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4333	1	5.4333	4.9333	5.9333	0								0	0	0	1.0178	1	2232	2232		0.69038	0	1		+		8275	9948	3985	4007	10208	10208					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2697936892509	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0851	1	6.0851	5.5851	6.5851	0								0	0	0	1.0178	1	2500	2500		0.69038	0	1		+		8276	9948	3985	4007	10209	10209					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2692443728447	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4385	1	6.4385	5.9385	6.9385	0								0	0	0	1.0178	1	2644	2644		0.69038	0	1		+		8277	9948	3985	4007	10210	10210					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2694579958916	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8254	1	6.8254	6.3254	7.3254	0								0	0	0	1.0178	1	2805	2805		0.69038	0	1		+		8278	9948	3985	4007	10211	10211					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2662231326103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.97136	1	1.1184	0.61839	1.6184	0.14703								0	0	0	1.0178	1	400	400		0.69038	0	1		+		8279	9948	3985	4007	10212	10212					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2691223025322	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0848	1	1.2318	0.73184	1.7318	0.14703								0	0	0	1.0178	1	447	447		0.69038	0	1		+		8280	9948	3985	4007	10213	10213					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2692748904228	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1938	1	1.3408	0.84085	1.8408	0.14703								0	0	0	1.0178	1	492	492		0.69038	0	1		+		8281	9948	3985	4007	10214	10214					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2684203982353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3511	1	1.4981	0.99815	1.9981	0.14703								0	0	0	1.0178	1	558	558		0.69038	0	1		+		8282	9948	3985	4007	10215	10215					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2691833376884	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9608	1	3.0833	2.5833	3.5833	0.12256								0	0	0	1.0178	1	1221	1221		0.69038	0	1		+		8283	9948	3985	4007	10216	10216					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2688171267509	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0886	1	3.2111	2.7111	3.7111	0.12256								0	0	0	1.0178	1	1275	1275		0.69038	0	1		+		8284	9948	3985	4007	10217	10217					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2681762576103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1892	1	3.2972	2.7972	3.7972	0.10802								0	0	0	1.0178	1	1316	1316		0.69038	0	1		+		8285	9948	3985	4007	10218	10218					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2699462771416	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2891	1	3.3911	2.8911	3.8911	0.10199								0	0	0	1.0178	1	1358	1358		0.69038	0	1		+		8286	9948	3985	4007	10219	10219					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2697631716728	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3998	1	3.5018	3.0018	4.0018	0.10199								0	0	0	1.0178	1	1404	1404		0.69038	0	1		+		8287	9948	3985	4007	10220	10220					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2700378298759	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4967	1	3.5987	3.0987	4.0987	0.10199								0	0	0	1.0178	1	1444	1444		0.69038	0	1		+		8288	9948	3985	4007	10221	10221					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2699767947197	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6124	1	3.7144	3.2144	4.2144	0.10199								0	0	0	1.0178	1	1490	1490		0.69038	0	1		+		8289	9948	3985	4007	10222	10222					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2687255740166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7228	1	3.8248	3.3248	4.3248	0.10199								0	0	0	1.0178	1	1536	1536		0.69038	0	1		+		8290	9948	3985	4007	10223	10223					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2683898806572	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0437	1	6.1236	5.6236	6.6236	0.079923								0	0	0	1.0178	1	2499	2499		0.69038	0	1		+		8291	9948	3985	4007	10224	10224					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2683593630791	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8376	1	6.9139	6.4139	7.4139	0.07632								0	0	0	1.0178	1	2827	2827		0.69038	0	1		+		8292	9948	3985	4007	10225	10225					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2687255740166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1516	1	7.228	6.728	7.728	0.07632								0	0	0	1.0178	1	2958	2958		0.69038	0	1		+		8293	9948	3985	4007	10226	10226					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2683593630791	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2488	1	7.3251	6.8251	7.8251	0.07632								0	0	0	1.0178	1	2998	2998		0.69038	0	1		+		8294	9948	3985	4007	10227	10227					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2685424685478	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3882	1	7.4646	6.9646	7.9646	0.07632								0	0	0	1.0178	1	3056	3056		0.69038	0	1		+		8295	9948	3985	4007	10228	10228					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2682983279228	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5208	1	7.5971	7.0971	8.0971	0.07632								0	0	0	1.0178	1	3111	3111		0.69038	0	1		+		8296	9948	3985	4007	10229	10229					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2683898806572	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7408	1	7.8172	7.3172	8.3172	0.07632								0	0	0	1.0178	1	3202	3202		0.69038	0	1		+		8297	9948	3985	4007	10230	10230					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2701293826103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.52643	1	1.1938	0.69381	1.6938	0.66738								0	0	0	1.0178	1	215	215		0.69038	0	1		+		8298	9948	3985	4007	10231	10231					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2695800662041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.62642	1	1.2938	0.79381	1.7938	0.66738								0	0	0	1.0178	1	256	256		0.69038	0	1		+		8299	9948	3985	4007	10232	10232					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2698547244072	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8966	1	6.5178	6.0178	7.0178	0.62127								0	0	0	1.0178	1	2435	2435		0.69038	0	1		+		8300	9948	3985	4007	10233	10233					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2691528201103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0234	1	6.6447	6.1447	7.1447	0.62127								0	0	0	1.0178	1	2487	2487		0.69038	0	1		+		8301	9948	3985	4007	10234	10234					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2678405642509	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1132	1	6.7345	6.2345	7.2345	0.62127								0	0	0	1.0178	1	2524	2524		0.69038	0	1		+		8302	9948	3985	4007	10235	10235					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2689086794853	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9811	1	8.6176	8.1176	9.1176	0.63651								0	0	0	1.0178	1	3305	3305		0.69038	0	1		+		8303	9948	3985	4007	10236	10236					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2692138552666	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0957	1	8.7322	8.2322	9.2322	0.63651								0	0	0	1.0178	1	3353	3353		0.69038	0	1		+		8304	9948	3985	4007	10237	10237					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2673828005791	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2091	1	8.8456	8.3456	9.3456	0.63651								0	0	0	1.0178	1	3401	3401		0.69038	0	1		+		8305	9948	3985	4007	10238	10238					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2681762576103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6714	1	9.308	8.808	9.808	0.63651								0	0	0	1.0178	1	3600	3600		0.69038	0	1		+		8306	9948	3985	4007	10239	10239					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2677795290947	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8715	1	9.508	9.008	10.008	0.63651								0	0	0	1.0178	1	3684	3684		0.69038	0	1		+		8307	9948	3985	4007	10240	10240					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2685424685478	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.038	1	9.6745	9.1745	10.175	0.63651								0	0	0	1.0178	1	3754	3754		0.69038	0	1		+		8308	9948	3985	4007	10241	10241					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2664672732353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3044	1	2.0528	1.5528	2.5528	0.7484								0	0	0	1.0178	1	539	539		0.69038	0	1		+		8309	9948	3985	4007	10242	10242					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2704040408134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8492	1	3.5976	3.0976	4.0976	0.7484								0	0	0	1.0178	1	1182	1182		0.69038	0	1		+		8310	9948	3985	4007	10243	10243					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2659179568291	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9645	1	4.7097	4.2097	5.2097	0.74525								0	0	0	1.0178	1	1643	1643		0.69038	0	1		+		8311	9948	3985	4007	10244	10244					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2696716189384	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0569	1	4.8022	4.3022	5.3022	0.74525								0	0	0	1.0178	1	1681	1681		0.69038	0	1		+		8312	9948	3985	4007	10245	10245					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2690917849541	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1564	1	4.9017	4.4017	5.4017	0.74525								0	0	0	1.0178	1	1722	1722		0.69038	0	1		+		8313	9948	3985	4007	10246	10246					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2699157595634	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2597	1	5.0049	4.5049	5.5049	0.74525								0	0	0	1.0178	1	1764	1764		0.69038	0	1		+		8314	9948	3985	4007	10247	10247					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2684814333916	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3518	1	5.097	4.597	5.597	0.74525								0	0	0	1.0178	1	1802	1802		0.69038	0	1		+		8315	9948	3985	4007	10248	10248					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2687255740166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4626	1	5.199	4.699	5.699	0.73642								0	0	0	1.0178	1	1848	1848		0.69038	0	1		+		8316	9948	3985	4007	10249	10249					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2683593630791	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.735	1	5.4714	4.9714	5.9714	0.73642								0	0	0	1.0178	1	1963	1963		0.69038	0	1		+		8317	9948	3985	4007	10250	10250					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2686340212822	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8367	1	5.5731	5.0731	6.0731	0.73642								0	0	0	1.0178	1	2006	2006		0.69038	0	1		+		8318	9948	3985	4007	10251	10251					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2702819705009	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9374	1	5.6738	5.1738	6.1738	0.73642								0	0	0	1.0178	1	2048	2048		0.69038	0	1		+		8319	9948	3985	4007	10252	10252					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2699157595634	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0479	1	5.7843	5.2843	6.2843	0.73642								0	0	0	1.0178	1	2095	2095		0.69038	0	1		+		8320	9948	3985	4007	10253	10253					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2695800662041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1408	1	5.8772	5.3772	6.3772	0.73642								0	0	0	1.0178	1	2133	2133		0.69038	0	1		+		8321	9948	3985	4007	10254	10254					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2702209353447	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2411	1	5.9776	5.4776	6.4776	0.73642								0	0	0	1.0178	1	2174	2174		0.69038	0	1		+		8322	9948	3985	4007	10255	10255					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2696716189384	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3415	1	6.0779	5.5779	6.5779	0.73642								0	0	0	1.0178	1	2216	2216		0.69038	0	1		+		8323	9948	3985	4007	10256	10256					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2685119509697	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4366	1	6.173	5.673	6.673	0.73642								0	0	0	1.0178	1	2254	2254		0.69038	0	1		+		8324	9948	3985	4007	10257	10257					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2695800662041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5536	1	6.29	5.79	6.79	0.73642								0	0	0	1.0178	1	2303	2303		0.69038	0	1		+		8325	9948	3985	4007	10258	10258					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2672302126884	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6165	1	9.3511	8.8511	9.8511	0.73452								0	0	0	1.0178	1	3583	3583		0.69038	0	1		+		8326	9948	3985	4007	10259	10259					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2684203982353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7288	1	9.4633	8.9633	9.9633	0.73452								0	0	0	1.0178	1	3630	3630		0.69038	0	1		+		8327	9948	3985	4007	10260	10260					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2705566287041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9283	1	9.6628	9.1628	10.163	0.73452								0	0	0	1.0178	1	3714	3714		0.69038	0	1		+		8328	9948	3985	4007	10261	10261					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2684509158134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1475	1	9.8821	9.3821	10.382	0.73452								0	0	0	1.0178	1	3806	3806		0.69038	0	1		+		8329	9948	3985	4007	10262	10262					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2676574587822	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2799	1	10.025	9.5245	10.525	0.74462								0	0	0	1.0178	1	3861	3861		0.69038	0	1		+		8330	9948	3985	4007	10263	10263					0.10394116205168302
GRKALALP	8	Unmodified	_GRKALALP_					0	0	0			REV__nc|ENSG00000135622|O95754-2|SEMA4F	REV__nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2684509158134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4924	1	10.237	9.7371	10.737	0.74462								0	0	0	1.0178	1	3950	3950		0.69038	0	1		+		8331	9948	3985	4007	10264	10264					0.10394116205168302
GRKARAPA	8	Unmodified	_GRKARAPA_					0	0	0		ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7544738650322	2	413.753936	825.493319	0.55001	0.00022757	-0.37836	-0.00015655	0.17165	7.102E-05	413.7540015914325	67.134	1.3383	67.134	66.512	67.85	0					89	42	3	0	0	0	0.89051	4	27821	27821;27908;27948;27998		2.3027	0	1	5692800			8332	6898	3986	4008	10265;10266;10267;10268	10265					0.07359177259831995
GRKARAPA	8	Unmodified	_GRKARAPA_					0	0	0		ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.7549621462822	2	413.753936	825.493319	2.05	0.00084819	-1.3545	-0.00056042	0.6955	0.00028777	413.753491257711	66.973	1.2478	67.298	66.718	67.965	0.32449					89	40	3	0	0	0	0.89051	7	27884	27884;27935;27984;28023;28073;28122;28188		2.3027	0	1	6023000			8333	6898	3986	4008	10269;10270;10271;10272;10273;10274;10275	10269					0.07359177259831995
GRKARAPA	8	Unmodified	_GRKARAPA_					0	0	0		ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	ENST00000489702.6_2_7:128588962-128589106:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.7543517947197	2	413.753936	825.493319	1.7174	0.00071058	-0.37364	-0.0001546	1.3437	0.00055598	413.7539627971385	65.544	1.1385	67.452	66.969	68.107	1.9085					60	36	2	0	0	0	0.89051	1	27580	27580		2.3027	0	1	2131800			8334	6898	3986	4008	10276	10276					0.07359177259831995
GRKFKWLYY	9	Unmodified	_GRKFKWLYY_					0	0	0			REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	630.2421142458916	2	630.848033	1259.68151	1.528	0.00096393	1.9127	0.0012066	3.4407	0.0021706	630.8489452456336	101.52	0.090118	101.52	101.47	101.56	0					4	2	2	0	0	0	0.11946	1	42494	42494		0.6015	0.14316	1	1150600	+		8335	14764	3987	4009	10277	10277					0.062059903936187766
GRKFKWLYY	9	Unmodified	_GRKFKWLYY_					0	0	0			REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	630.848033	1259.68151	2.6547	0.0016747	2.9876	0.0018847	5.6423	0.0035594	630.8499880786028	101.49	0.092651	101.56	101.52	101.61	0.067009	0.023233	0.001076	NaN	0.6015	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	974290	+		8336	14764	3987	4009							0.062059903936187766
GRKGKMKK	8	Unmodified	_GRKGKMKK_					0	0	0			REV__ENST00000465155.5_1_1:212791475-212791580:+|nuORF	REV__ENST00000465155.5_1_1:212791475-212791580:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	467.1845275759697	2	466.794746	931.57494	3.555	0.0016595	-0.01648	-7.6926E-06	3.5386	0.0016518	466.7950450456607	109.12	0.26772	109.27	109.05	109.32	0.1548					20	12	2	0	0	0	2.3239	1	47223	47223		0.69038	0	1	2974200	+		8337	13232	3988	4010	10278	10278					0.10641536627429105
GRKIGRNVP	9	Unmodified	_GRKIGRNVP_					0	0	0		ENST00000314833.10_1_1:242511449-242612731:-|nuORF	ENST00000314833.10_1_1:242511449-242612731:-|nuORF	ENST00000314833.10_1_1:242511449-242612731:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.8724548220634	3	332.873559	995.598846	-1.8456	-0.00061435	-1.8558	-0.00061776	-3.7014	-0.0012321	332.87326083576136	40.441	0.49597	40.441	40.202	40.698	0					68	15	5	0	0	0	0.76103	1	16930	16930		4.897	2.3985	1	240640000			8338	5823	3989	4011	10279	10279					0.10087093385459411
GRKLHLGVMI	10	Unmodified	_GRKLHLGVMI_					0	0	0		ENST00000314128.8_1_12:56749998-56750273:-|nuORF	ENST00000314128.8_1_12:56749998-56750273:-|nuORF	ENST00000314128.8_1_12:56749998-56750273:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3435546755791	2	562.342061	1122.66957	1.2783	0.00071885	3.1732	0.0017844	4.4515	0.0025033	562.3438163433274	71.225	0.89718	73.049	72.547	73.445	1.824					52	28	3	0	0	0	0.87343	1	29864	29864		4.3292	4.3292	1	5197600			8339	5819	3990	4012	10280	10280					0.11314050378769025
GRKQLRLRTLI	11	Unmodified	_GRKQLRLRTLI_					0	0	0			REV__MARK4-CKM|1|fusion	REV__MARK4-CKM|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.4472534060478	2	677.443695	1352.87284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.13	1	107.29	106.79	107.79	0.16174								0	0	0	0.63775	1	45955	45955		0.35063	0	1		+		8340	9154	3991	4013	10281	10281					0.21051491424714186
GRKRKVPDEIL	11	Unmodified	_GRKRKVPDEIL_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.6019470095634	3	437.601616	1309.78302	1.4101	0.00061708	0.27414	0.00011996	1.6843	0.00073705	437.60170524673214	93.824	0.91581	93.824	93.296	94.212	0					46	28	2	0	0	0	1.039	1	39156	39156		0.45452	0	1	489820			8341	4657	3992	4014	10282	10282					0.1405181702552909
GRLKRKKLLK	10	Unmodified	_GRLKRKKLLK_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4421874880791	2	620.440424	1238.86629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.64	1	104.64	104.14	105.14	0								0	0	0	0.6624	1	44215	44215		0.40072	0	1				8342	1748	3993	4015	10283	10283					0.25641598264019194
GRLQRRNRLP	10	Unmodified	_GRLQRRNRLP_					0	0	0			REV__ENST00000549469.1_1_2:176973927-176983694:+|nuORF	REV__ENST00000549469.1_1_2:176973927-176983694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5931579470634	3	422.593566	1264.75887	0.63894	0.00027001	-3.0042	-0.0012695	-2.3652	-0.00099953	422.5921838510224	36.29	0.4326	36.29	36.151	36.584	0					56	40	2	0	0	0	0.8974	1	15208	15208		1.7423	0.41263	1	10275000	+		8343	13820	3994	4016	10284	10284					0.13708021382512925
GRLQRRNRLP	10	Unmodified	_GRLQRRNRLP_					0	0	0			REV__ENST00000549469.1_1_2:176973927-176983694:+|nuORF	REV__ENST00000549469.1_1_2:176973927-176983694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1964294314384	4	317.196994	1264.75887	1.0711	0.00033975	-1.9649	-0.00062326	-0.89379	-0.00028351	317.1961583985246	40.829	1.8044	42.154	41.038	42.843	1.3254					142	57	4	0	0	0	0.8974	1	17105	17105		1.7423	0.41263	1	3140200	+		8344	13820	3994	4016	10285	10285					0.13708021382512925
GRPLRVRLRLL	11	Unmodified	_GRPLRVRLRLL_					0	0	0		ENST00000532085.1_1_11:118900878-118901178:-|nuORF	ENST00000532085.1_1_11:118900878-118901178:-|nuORF	ENST00000532085.1_1_11:118900878-118901178:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9819824099541	4	337.980753	1347.89391	0.15388	5.2008E-05	2.5104	0.00084847	2.6643	0.00090047	337.9816268965318	26.379	0.42468	28.126	27.884	28.308	1.747					23	13	2	0	0	0	1.039	1	10973	10973		0.45452	0.35968	1	2269800			8345	7174	3995	4017	10286	10286					0.2338750152425746
GRPMSKKK	8	Unmodified	_GRPMSKKK_					0	0	0		nc|ENSG00000064607|Q8IX01-4|SUGP2;nc|ENSG00000064607|Q8IX01-3|SUGP2;ENSG00000064607|ENST00000452918|SUGP2;ENST00000598240.1_1_19:19105804-19136912:-|nuORF	nc|ENSG00000064607|Q8IX01-4|SUGP2	nc|ENSG00000064607|Q8IX01-4|SUGP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1869994997978	3	311.188378	930.543305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	103.99	103.49	104.49	0								0	0	0	1.0178	1	43793	43793		0.40072	0	1				8346	775	3996	4018	10287	10287					0.07525543873487095
GRPRRRQRV	9	Unmodified	_GRPRRRQRV_					0	0	0			REV__ENST00000574741.1_1_17:45159638-45177554:-|nuORF	REV__ENST00000574741.1_1_17:45159638-45177554:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2478210330009	3	394.246389	1179.71734	0.55191	0.00021759	2.0327	0.00080137	2.5846	0.001019	394.2470764659531	90.454	1.5663	90.454	90.095	91.662	0					97	49	5	0	0	0	0.84531	1	37891	37891		1.1933	0.41681	1	33909000	+		8347	13979	3997	4019	10288	10288					0.13466885413822638
GRQQRWKMRLR	11	Unmodified	_GRQQRWKMRLR_					0	0	0		ENST00000487755.1_1_1:155939986-155940142:-|nuORF	ENST00000487755.1_1_1:155939986-155940142:-|nuORF	ENST00000487755.1_1_1:155939986-155940142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.9372436404228	2	757.933503	1513.85245	3.659	0.0027732	0.47888	0.00036296	4.1378	0.0031362	758.4361656052151	86.373	0.53951	87.92	87.663	88.203	1.547					120	19	8	0	0	0	1.0395	1	36510	36510		0.30703	0.03801	1	43001000			8348	6881	3998	4020	10289	10289					0.11607997493251787
GRRQVPLS	8	Unmodified	_GRRQVPLS_					0	0	0		ENST00000220592.9_2_8:141534574-141534862:-|nuORF	ENST00000220592.9_2_8:141534574-141534862:-|nuORF	ENST00000220592.9_2_8:141534574-141534862:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7738525271416	2	456.772326	911.530098	2.965	0.0013543	0.39294	0.00017948	3.3579	0.0015338	456.77228649603853	70.973	0.48708	72.314	72.054	72.541	1.3415					37	15	3	0	0	0	0.88663	1	29760	29760		4.756	0	1	10062000			8349	5528	3999	4021	10290	10290					0.07079429085752054
GRRQVPLS	8	Unmodified	_GRRQVPLS_					0	0	0		ENST00000220592.9_2_8:141534574-141534862:-|nuORF	ENST00000220592.9_2_8:141534574-141534862:-|nuORF	ENST00000220592.9_2_8:141534574-141534862:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	456.772326	911.530098	2.3782	0.0010863	0.17012	7.7705E-05	2.5483	0.001164	456.77228369656086	71.907	0.60027	72.232	71.882	72.483	0.32494	-0.050326	-7.1131E-05	NaN	4.756	51	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12516000			8350	5528	3999	4021							0.07079429085752054
GRRRKITRYTK	11	Unmodified	_GRRRKITRYTK_					0	0	0		chrX:101408307-101411936|428|54.09|0.0|22.37|+|1|None,RPL36A-HNRNPH2|1	chrX:101408307-101411936|428|54.09|0.0|22.37|+|1|None,RPL36A-HNRNPH2|1	chrX:101408307-101411936|428|54.09|0.0|22.37|+|1|None,RPL36A-HNRNPH2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4736511111259	4	359.474563	1433.86915	-0.84322	-0.00030312	-0.67758	-0.00024357	-1.5208	-0.00054669	359.47424480500956	75.712	0.69347	75.712	75.471	76.164	0					51	21	3	0	0	0	1.0369	1	31514	31514		1.1098	0.26481	1	2345600			8351	301	4000	4022	10291	10291					0.16956821650842357
GRRRLQHQRLR	11	Unmodified	_GRRRLQHQRLR_					0	0	0		ENST00000262304.8_1_16:2141877-2142581:-|nuORF	ENST00000262304.8_1_16:2141877-2142581:-|nuORF	ENST00000262304.8_1_16:2141877-2142581:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6362792849541	3	492.634536	1474.88178	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.776	1	88.776	88.276	89.276	0								0	0	0	0.63775	1	37115	37115		0.08335	0	1				8352	5635	4001	4023	10292	10292					0.1633327783376899
GRRRQQIH	8	Unmodified	_GRRRQQIH_					0	0	0			REV__ENST00000420651.2_1_6:111804764-111824499:+|nuORF	REV__ENST00000420651.2_1_6:111804764-111824499:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.8054687380791	2	525.805023	1049.59549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.49	1	103.55	103.05	104.05	0.059502								0	0	0	1.0178	1	43418	43418		2.3027	0.4585	1		+		8353	12974	4002	4024	10293	10293					0.07267843331464974
GRRRRRGQPRE	11	Unmodified	_GRRRRRGQPRE_					0	0	0		nc|ENSG00000047644|Q9ULE0-2|WWC3;WWC3|p.F662Lfs*14|1|0.03|ENSG00000047644|chrX:10126184-10126202|TTCCAAGTGCCGCTGGTGT/-|frameshift_variant;ENSG00000047644|ENST00000380861|WWC3	nc|ENSG00000047644|Q9ULE0-2|WWC3	nc|ENSG00000047644|Q9ULE0-2|WWC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7109557986259	4	356.7108	1422.81409	-0.81592	-0.00029105	1.4438	0.00051503	0.62792	0.00022399	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	1.0308	1	22127	22127		1.9275	0.71267	1	19031000			8354	681	4003	4025	10294	10294					0.11959827902978759
GRRRRRRRMR	10	Unmodified	_GRRRRRRRMR_					0	0	0		nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9679138064384	3	485.967744	1454.8814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.902	1	14.001	13.501	14.501	0.09944								0	0	0	0.66227	1	5769	5769		0.62683	0	1				8355	7943	4004	4026	10295	10295					0.17215579632920708
GRRRRRRRMR	10	Unmodified	_GRRRRRRRMR_					0	0	0		nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9669372439384	3	485.967744	1454.8814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.626	1	14.739	14.239	15.239	0.11295								0	0	0	0.66227	1	6069	6069		0.62683	0	1				8356	7943	4004	4026	10296	10296					0.17215579632920708
GRRRRRRRMR	10	Unmodified	_GRRRRRRRMR_					0	0	0		nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9669677615166	3	485.967744	1454.8814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.064	1	15.177	14.677	15.677	0.11295								0	0	0	0.66255	1	6252	6252		0.13989	0	1				8357	7943	4004	4026	10297	10297					0.17215579632920708
GRRRRRRRMR	10	Unmodified	_GRRRRRRRMR_					0	0	0		nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9686157107353	3	485.967744	1454.8814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.343	1	15.473	14.973	15.973	0.13022								0	0	0	0.66227	1	6368	6368		0.62683	0.21856	1				8358	7943	4004	4026	10298	10298					0.17215579632920708
GRRRVLAILIR	11	Unmodified	_GRRRVLAILIR_					0	0	0			REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9438964724541	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.48	1	14.48	13.98	14.98	0								0	0	0	0.63775	1	6008	6008		1.1933	0.79263	1		+		8359	12478	4005	4027	10299	10299					0.23019215007184357
GRRRVLAILIR	11	Unmodified	_GRRRVLAILIR_					0	0	0			REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9429199099541	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.787	1	14.787	14.287	15.287	0								0	0	0	0.63775	1	6137	6137		1.1933	0.735	1		+		8360	12478	4005	4027	10300	10300					0.23019215007184357
GRRRVLAILIR	11	Unmodified	_GRRRVLAILIR_					0	0	0			REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	REV__ENST00000337872.8_1_4:4304620-4317556:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9438964724541	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.169	1	21.169	20.669	21.669	0								0	0	0	0.63775	1	8801	8801		1.1933	0.79263	1		+		8361	12478	4005	4027	10301	10301					0.23019215007184357
GRRWSWQWWWQ	11	Unmodified	_GRRWSWQWWWQ_					0	0	0		ENST00000320785.9_1_17:4925760-4925838:+|nuORF	ENST00000320785.9_1_17:4925760-4925838:+|nuORF	ENST00000320785.9_1_17:4925760-4925838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.4042236208916	2	831.397276	1660.78	1.9814	0.0016473	3.1576	0.0026253	5.139	0.0042726	831.4004015684078	51.67	2.0526	51.67	51.199	53.251	0					153	66	3	0	0	0	1.0366	1	22093	22093		1.1933	0.88631	1	2013500			8362	5845	4006	4028	10302	10302					-0.023960133086575297
GRVKLGAP	8	Unmodified	_GRVKLGAP_					0	0	0		ENST00000568546.5_3_16:2029772-2030570:+|nuORF	ENST00000568546.5_3_16:2029772-2030570:+|nuORF	ENST00000568546.5_3_16:2029772-2030570:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2562744021416	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.119	1	27.836	27.336	28.336	1.7167								0	0	0	1.0178	1	10922	10922		9.3474	0	1				8363	7374	4007	4029	10303	10303					0.08553543171092315
GRVLAAGEV	9	Unmodified	_GRVLAAGEV_					0	0	0			REV__ENST00000423600.1_1_3:195384570-195384792:-|nuORF	REV__ENST00000423600.1_1_3:195384570-195384792:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	436.2559692263603	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.354	1	97.445	96.945	97.945	0.090881								0	0	0	0.42693	1	40736	40736		1.8442	0	1		+		8364	12988	4008	4030	10304	10304					0.051889181002820806
GRWAKKRKLPR	11	Unmodified	_GRWAKKRKLPR_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	698.4477416872978	2	698.444029	1394.87351	2.7485	0.0019197	0.87217	0.00060917	3.6207	0.0025289	698.4444533511976	107.21	0.13708	107.37	107.28	107.41	0.15781					12	6	2	0	0	0	1.0402	1	46080	46080		0	0	1	27541000			8365	16438	4009	4031	10305	10305					0.19186330864454249
GRWAKKRKLPR	11	Unmodified	_GRWAKKRKLPR_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	698.444029	1394.87351	2.6946	0.001882	1.7515	0.0012234	4.4461	0.0031054	698.9461987072722	107.23	0.089706	107.28	107.2	107.29	0.052452	-0.055433	0.00052542	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6070700			8366	16438	4009	4031							0.19186330864454249
GRWAKKRKLPR	11	Unmodified	_GRWAKKRKLPR_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	698.444029	1394.87351	2.536	0.0017713	2.1353	0.0014914	4.6713	0.0032626	698.4454887512384	107.2	0.12247	107.36	107.27	107.39	0.15795	0.025193	0.0010614	NaN	0	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28673000			8367	16438	4009	4031							0.19186330864454249
GRYTTQTQL	9	Unmodified	_GRYTTQTQL_					0	0	0			REV__ENST00000533629.5_1_11:65144527-65149406:-|nuORF	REV__ENST00000533629.5_1_11:65144527-65149406:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.2820922732353	2	534.277638	1066.54072	2.7177	0.001452	-0.48742	-0.00026042	2.2303	0.0011916	534.2772383003182	47.383	0.99456	49.359	48.592	49.587	1.976					71	31	3	0	0	0	0.10473	1	19848	19848		47.749	1.7277	1	4644300	+		8368	10636	4010	4032	10306	10306					0.010113669495467548
GSAASDRVSD	10	Unmodified	_GSAASDRVSD_					0	0	0			REV__ENST00000554664.5_1_14:74485534-74485702:-|nuORF	REV__ENST00000554664.5_1_14:74485534-74485702:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1506835818291	3	322.149194	963.425752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.243	1	62.572	62.072	63.072	0.32974								0	0	0	0.66218	1	26077	26077		0.77653	0.31819	1		+		8369	13858	4011	4033	10307	10307					-0.057423622522833284
GSALILEAIQ	10	Unmodified	_GSALILEAIQ_					0	0	0			REV__tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	REV__tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1014.588671863079	1	1014.58299	1013.57571	2.2314	0.0022639	0.36034	0.0003656	2.5917	0.0026295	1014.5834031929616	65.434	0.40222	66.833	66.601	67.004	1.3989					34	12	4	0	0	0	0.059378	1	27495	27495		74.929	1.9611	1	7237600	+		8370	15066	4012	4034	10308	10308					0.06946609757460465
GSAPLAIG	8	Unmodified	_GSAPLAIG_					0	0	0		nc|ENSG00000240583|P29972-4|AQP1;nc|ENSG00000240583|P29972-2|AQP1;nc|ENSG00000240583|P29972-3|AQP1;ENSG00000240583|ENST00000311813|AQP1	nc|ENSG00000240583|P29972-4|AQP1	nc|ENSG00000240583|P29972-4|AQP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1989623904228	2	343.197596	684.38064	-0.048804	-1.6749E-05	3.9965	0.0013716	3.9477	0.0013548	343.19915667099303	20.468	0.92052	22.043	21.639	22.559	1.5748					84	30	5	0	0	0	0.89176	1	8455	8455		0.79363	0	1	240480000			8371	5333	4013	4035	10309	10309					0.025824837431514425
GSAPLAIG	8	Unmodified	_GSAPLAIG_					0	0	0		nc|ENSG00000240583|P29972-4|AQP1;nc|ENSG00000240583|P29972-2|AQP1;nc|ENSG00000240583|P29972-3|AQP1;ENSG00000240583|ENST00000311813|AQP1	nc|ENSG00000240583|P29972-4|AQP1	nc|ENSG00000240583|P29972-4|AQP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	343.197596	684.38064	0.2328	7.9895E-05	4.8338	0.0016589	5.0666	0.0017388	343.19947782035086	21.783	0.83271	22.006	21.572	22.405	0.223	-0.019963	0.00018198	NaN	0.79363	82	27	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221720000			8372	5333	4013	4035							0.025824837431514425
GSAPLAIG	8	Unmodified	_GSAPLAIG_					0	0	0		nc|ENSG00000240583|P29972-4|AQP1;nc|ENSG00000240583|P29972-2|AQP1;nc|ENSG00000240583|P29972-3|AQP1;ENSG00000240583|ENST00000311813|AQP1	nc|ENSG00000240583|P29972-4|AQP1	nc|ENSG00000240583|P29972-4|AQP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	343.197596	684.38064	-0.31075	-0.00010665	4.6739	0.0016041	4.3631	0.0014974	343.199379433134	20.904	0.61901	22.029	21.775	22.394	1.1254	0.0030112	7.222E-05	NaN	0.79363	70	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	235420000			8373	5333	4013	4035							0.025824837431514425
GSCGECIE	8	Unmodified	_GSCGECIE_					0	0	0			REV__ENSG00000155749|ENST00000392257|FLACC1	REV__ENSG00000155749|ENST00000392257|FLACC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2545349001884	2	399.143846	796.27314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.12	1	101.32	100.82	101.82	0.19584								0	0	0	1.0178	1	42519	42519		2.5775	0	1		+		8374	10499	4014	4036	10310	10310					-0.1331459724491424
GSFYGNTYRV	10	Unmodified	_GSFYGNTYRV_					0	0	0		tr|A0A553SQV6|A0A553SQV6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07360PE=4SV=1	tr|A0A553SQV6|A0A553SQV6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07360PE=4SV=1	tr|A0A553SQV6|A0A553SQV6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07360PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2787963747978	2	582.277638	1162.54072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.01	1	101.21	100.71	101.71	0.20527								0	0	0	0.65894	1	42469	42469		6.2058	1.4498	1				8375	16532	4015	4037	10311	10311					-0.03404633050490702
GSGAGRVRGIP	11	Unmodified	_GSGAGRVRGIP_					0	0	0		ENST00000476089.1_1_2:182321937-182323202:+|nuORF;ENST00000465522.5_1_2:182322141-182350724:+|nuORF	ENST00000476089.1_1_2:182321937-182323202:+|nuORF	ENST00000476089.1_1_2:182321937-182323202:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8633605837822	3	342.864952	1025.57303	-1.8314	-0.00062793	-2.6719	-0.00091612	-4.5034	-0.001544	342.8639786052565	31.541	0.56007	31.541	31.261	31.821	0					43	17	4	0	0	0	0.96769	1	13224	13224		2.6312	0	1	6262700			8376	6783	4016	4038	10312	10312					0.061261991431820206
GSGGDFTE	8	Unmodified	_GSGGDFTE_					0	0	0			REV__nc|ENSG00000123106|Q7Z6B0-3|CCDC91	REV__nc|ENSG00000123106|Q7Z6B0-3|CCDC91	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1634399294853	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.79	1	102.97	102.47	103.47	0.18066								0	0	0	1.0178	1	43255	43255		0.69038	0	1		+		8377	9616	4017	4039	10313	10313					-0.1008018163813631
GSGGGGVL	8	Unmodified	_GSGGGGVL_					0	0	0			REV__tr|A0A7D6VNX0|A0A7D6VNX0_9CLOTHydantoinase/oxoprolinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14350PE=4SV=1	REV__tr|A0A7D6VNX0|A0A7D6VNX0_9CLOTHydantoinase/oxoprolinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14350PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1601135134697	2	302.158471	602.30239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.61	1	104.79	104.29	105.29	0.1731								0	0	0	1.0178	1	44304	44304		0.79363	0	1		+		8378	15346	4018	4040	10314	10314					-0.014669488420963717
GSGLLGPV	8	Unmodified	_GSGLLGPV_					0	0	0			REV__nc|ENSG00000182150|Q5T890-2|ERCC6L2	REV__nc|ENSG00000182150|Q5T890-2|ERCC6L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2070190310478	2	350.205421	698.39629	0.8532	0.0002988	3.4825	0.0012196	4.3357	0.0015184	350.2064603781969	31.782	1.0442	32.072	31.449	32.494	0.29086					56	33	2	0	0	0	0.89008	1	13307	13307		2.5775	0	1	1695400	+		8379	11340	4019	4041	10315	10315					0.035027702601951205
GSGNGGGC	8	Unmodified	_GSGNGGGC_					0	0	0			REV__ENST00000597564.5_1_19:58741406-58741469:+|nuORF	REV__ENST00000597564.5_1_19:58741406-58741469:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.2805053591728	1	608.2093	607.202024	1.8143	0.0011034	-0.49755	-0.00030261	1.3167	0.00080084	608.2111520159934	41.6	0.5584	43.493	43.241	43.799	1.8927					29	17	2	0	0	0	2.3239	1	17457	17457		0.79363	0	1	628760	+		8380	14101	4020	4042	10316	10316					-0.11728929167406932
GSGNGGGC	8	Unmodified	_GSGNGGGC_					0	0	0			REV__ENST00000597564.5_1_19:58741406-58741469:+|nuORF	REV__ENST00000597564.5_1_19:58741406-58741469:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.1506	0.001308	-2.3979	-0.0014585	-0.24735	-0.00015044	608.2101978805953	43.304	1.376	43.304	42.849	44.225	0	-0.09473	-0.00031447	NaN	0	72	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	773650	+		8381	14101	4020	4042							-0.11728929167406932
GSGPAPRATR	10	Unmodified	_GSGPAPRATR_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2672607302666	2	485.264865	968.515176	2.1234	0.0010304	3.4201	0.0016597	5.5435	0.0026901	485.26630225633244	82.024	0.48413	82.024	81.701	82.185	0					27	15	2	0	0	0	0.88579	1	34154	34154		2.9952	0.41776	1	1918100	+		8382	13694	4021	4043	10317	10317					0.029659372177547993
GSGPAPRATR	10	Unmodified	_GSGPAPRATR_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	485.264865	968.515176	2.1234	0.0010304	3.4201	0.0016597	5.5435	0.0026901	485.26630225633244	82.024	0.48413	82.024	81.701	82.185	0	0	0	NaN	2.9952	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1918100	+		8383	13694	4021	4043							0.029659372177547993
GSHSESTSTL	10	Unmodified	_GSHSESTSTL_					0	0	0			REV__ENSG00000166860|ENST00000300101|ZBTB39	REV__ENSG00000166860|ENST00000300101|ZBTB39	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2278320193291	2	503.22781	1004.44107	0.14789	7.4422E-05	1.5796	0.00079488	1.7275	0.0008693	503.2284411531661	18.538	0.23933	19.986	19.85	20.09	1.448					17	7	3	0	0	0	0.82019	1	7705	7705		10.074	0	1	544820	+		8384	10844	4022	4044	10318	10318					-0.06097495455094304
GSIILTPLV	9	Unmodified	_GSIILTPLV_					0	0	0		tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.8643981814384	3	304.863666	911.569169	-0.24227	-7.386E-05	2.6353	0.00080341	2.393	0.00072955	304.86446530000063	21.388	0.42435	22.565	22.415	22.839	1.177					48	13	4	0	0	0	0.68551	2	8956	8956;9007		4.897	1.427	1	7836700			8385	16220	4023	4045	10319;10320	10319					0.10984716596749422
GSIILTPLV	9	Unmodified	_GSIILTPLV_					0	0	0		tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	tr|A0A553SIU1|A0A553SIU1_NIACIUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=NialliacirculansOX=1397GN=CEQ21_15515PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	304.863666	911.569169	-0.22615	-6.8946E-05	2.3667	0.00072152	2.1405	0.00065257	304.8643284790932	20.962	0.54029	22.537	22.349	22.89	1.5748	-0.028582	-0.00010038	NaN	4.897	53	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7364300			8386	16220	4023	4045							0.10984716596749422
GSKGAIIR	8	Unmodified	_GSKGAIIR_					0	0	0		ENST00000586523.1_1_18:43666301-43666454:-|nuORF	ENST00000586523.1_1_18:43666301-43666454:-|nuORF	ENST00000586523.1_1_18:43666301-43666454:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	401.2522460818291	2	401.250695	800.486836	2.8549	0.0011455	2.5811	0.0010357	5.436	0.0021812	401.2517539848629	107.88	0.20351	107.93	107.84	108.04	0.052444					22	10	3	0	0	0	0.89178	1	46253	46253		0.69038	0	1	54952000			8387	7456	4024	4046	10321	10321					0.07861239308476797
GSKGAIIR	8	Unmodified	_GSKGAIIR_					0	0	0		ENST00000586523.1_1_18:43666301-43666454:-|nuORF	ENST00000586523.1_1_18:43666301-43666454:-|nuORF	ENST00000586523.1_1_18:43666301-43666454:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	401.250695	800.486836	-0.27223	-0.00010923	5.3343	0.0021404	5.0621	0.0020312	401.25288464770597	107.92	0.20312	107.92	107.82	108.03	0	-0.0057345	0.0013591	NaN	0.69038	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71725000			8388	7456	4024	4046							0.07861239308476797
GSKIVGYSIEK	11	Unmodified	_GSKIVGYSIEK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2240783572197	3	394.223923	1179.64994	-0.89269	-0.00035192	2.4876	0.00098069	1.5949	0.00062876	394.22489822710133	19.558	0.3115	19.558	19.386	19.697	0					21	9	3	0	0	0	0.50816	1	8109	8109		19.615	0	1	2353100			8389	3425;7900	4025	4047	10322	10322					0.06729952848991161
GSKVTAPAAR	10	Unmodified	_GSKVTAPAAR_					0	0	0			REV__ENST00000392781.6_1_3:160822625-160823042:-|nuORF	REV__ENST00000392781.6_1_3:160822625-160823042:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2783691287041	2	479.277441	956.540328	2.163	0.0010367	-0.11401	-5.4641E-05	2.049	0.00098205	479.2773897537301	80.418	0.50079	80.418	80.165	80.666	0					38	15	3	0	0	0	0.89803	1	33540	33540		1.3295	1.3295	1	7658600	+		8390	12804	4026	4048	10323	10323					0.06031992020314192
GSLFMGLLYP	10	Unmodified	_GSLFMGLLYP_					0	0	0			REV__tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	REV__tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.7883788943291	2	549.288628	1096.5627	2.797	0.0015364	4.4411	0.0024395	7.2381	0.0039758	549.290989077485	65.138	0.62417	66.537	66.193	66.817	1.3989					27	19	2	0	0	0	0.12425	1	27413	27413		19.257	12.534	1	638050	+		8391	15211	4027	4049	10324	10324					0.018284553737430542
GSLFMGLLYP	10	Unmodified	_GSLFMGLLYP_					0	0	0			REV__tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	REV__tr|A0A553SSP7|A0A553SSP7_NIACIYwiC-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_03390PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.288628	1096.5627	2.1035	0.0011554	2.0818	0.0011435	4.1853	0.0022989	549.2899730025684	64.671	0.85092	66.599	65.919	66.77	1.928	0.030981	-0.001374	NaN	30.637	32	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	721200	+		8392	15211	4027	4049							0.018284553737430542
GSLLVKPVIRK	11	Unmodified	_GSLLVKPVIRK_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.4058715701103	2	605.405715	1208.79688	3.1307	0.0018953	-2.1759	-0.0013173	0.95475	0.00057801	605.4042926836894	107.42	0.24654	107.58	107.45	107.7	0.15781					43	12	5	0	0	0	1.0362	1	46225	46225		1.3295	0.80477	1	705510000			8393	6919	4028	4050	10325	10325					0.20083094524579792
GSNMLKWLQDV	11	Unmodified	_GSNMLKWLQDV_					0	0	0			REV__ENSG00000064313|ENST00000378164|TAF2	REV__ENSG00000064313|ENST00000378164|TAF2	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9432	1	9.5797	9.0797	10.08	0.63651								0	0	0	0.63775	1	3714	3714		0.073264	0	1		+		8394	8660	4029	4051	10326	10326					0.010571113457899628
GSRKRRKHQV	10	Unmodified	_GSRKRRKHQV_					0	0	0		ENST00000272462.2_1_2:110873982-110874102:-|nuORF	ENST00000272462.2_1_2:110873982-110874102:-|nuORF	ENST00000272462.2_1_2:110873982-110874102:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6927062869072	4	313.693081	1250.74322	0.49634	0.0001557	-1.3944	-0.00043742	-0.89807	-0.00028172	313.6924856197585	31.201	0.69389	31.492	31.211	31.905	0.29086					81	22	5	0	0	0	0.88508	1	13124	13124		3.0723	1.33	1	12502000			8395	5679	4030	4052	10327	10327					0.1278773486544651
GSRKRRKHQV	10	Unmodified	_GSRKRRKHQV_					0	0	0		ENST00000272462.2_1_2:110873982-110874102:-|nuORF	ENST00000272462.2_1_2:110873982-110874102:-|nuORF	ENST00000272462.2_1_2:110873982-110874102:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	313.693081	1250.74322	0.11039	3.4628E-05	-3.0782	-0.00096561	-2.9678	-0.00093098	313.691993126686	29.416	0.48679	31.215	31.02	31.506	1.7987	-0.079691	-0.0015103	NaN	3.0723	55	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16906000			8396	5679	4030	4052							0.1278773486544651
GSRNWRLGVES	11	Unmodified	_GSRNWRLGVES_					0	0	0		ENSG00000178394|ENST00000323865|HTR1A	ENSG00000178394|ENST00000323865|HTR1A	ENSG00000178394|ENST00000323865|HTR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1260.647143542767	1	1260.64436	1259.63708	2.1071	0.0026563	0.4577	0.000577	2.5648	0.0032333	1260.6446918457955	104.72	0.077225	104.89	104.85	104.92	0.1731					12	3	4	0	0	0	1.0366	1	44380	44380		1.1933	0	1	102360000			8397	4482	4031	4053	10328	10328					0.017649345094923774
GSRSFFGLKG	10	Unmodified	_GSRSFFGLKG_					0	0	0		nc|ENSG00000091129|Q92823-2|NRCAM;ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2846557497978	2	528.285266	1054.55598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.949	1	54.919	54.419	55.419	1.9697								0	0	0	0.62071	1	22182	22182		20.415	3.4722	1				8398	1147	4032	4054	10329	10329					0.0308827853737057
GSSAAGLVFLI	11	Unmodified	_GSSAAGLVFLI_					0	0	0		ENSG00000133216|ENST00000374630|EPHB2;nc|ENSG00000133216|P29323-3|EPHB2;nc|ENSG00000133216|P29323|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	ENSG00000133216|ENST00000374630|EPHB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7993652224541	2	517.797675	1033.5808	3.3939	0.0017573	0.43413	0.00022479	3.828	0.0019821	517.7979100840887	97.482	0.20932	97.788	97.685	97.894	0.3062					18	6	4	0	0	0	0.13258	2	40987	40987;41036		49.933	0	1	96728000			8399	2564	4033	4055	10330;10331	10330					0.06534913620112093
GSSCAALFVAG	11	Unmodified	_GSSCAALFVAG_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1606933474541	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.478	1	4.1016	3.6016	4.6016	0.62362								0	0	0	0.63775	1	1436	1436		0.094841	0.094841	1		+		8400	8777	4034	4056	10332	10332					-0.03250451733936188
GSSLILFID	9	Unmodified	_GSSLILFID_					0	0	0			REV__ENST00000562948.1_1_15:76643474-76646365:-|nuORF	REV__ENST00000562948.1_1_15:76643474-76646365:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1849548220634	3	322.183176	963.527698	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.49	1	102.55	102.05	103.05	0.062805								0	0	0	0.42693	1	42932	42932		1.0715	0	1		+		8401	13909	4035	4057	10333	10333					0.04447535837425676
GSSSYLFFRIN	11	Unmodified	_GSSSYLFFRIN_					0	0	0			REV__tr|A0A553SGT6|A0A553SGT6_NIACIPhosphoserinephosphataseOS=NialliacirculansOX=1397GN=CEQ21_11545PE=4SV=1	REV__tr|A0A553SGT6|A0A553SGT6_NIACIPhosphoserinephosphataseOS=NialliacirculansOX=1397GN=CEQ21_11545PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9866	1	3.9866	3.4866	4.4866	0								0	0	0	0.63775	1	1638	1638		0.094841	0.011491	1		+		8402	14768	4036	4058	10334	10334					0.007201845634881465
GSTTLQFILL	10	Unmodified	_GSTTLQFILL_					0	0	0			REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8208495974541	2	546.818607	1091.62266	3.1006	0.0016955	0.44417	0.00024288	3.5448	0.0019384	546.8187786967859	74.522	0.79125	75.84	75.31	76.101	1.318					67	25	4	0	0	0	0.78468	1	31146	31146		13.906	2.2658	1	12766000	+		8403	14720	4037	4059	10335	10335					0.08051469308611559
GSVDFQRTWK	10	Unmodified	_GSVDFQRTWK_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5446655154228	3	408.543767	1222.60947	-0.72954	-0.00029805	1.9261	0.00078691	1.1966	0.00048886	408.5446707320336	14.024	1.3925	14.024	13.887	15.28	0					98	44	4	0	0	0	0.70618	2	5872	5872;5917		11.518	2.7661	1	17343000			8404	1155	4038	4060	10336;10337	10336					0.007070312492032826
GSVDFQRTWK	10	Unmodified	_GSVDFQRTWK_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5442077517509	3	408.543767	1222.60947	0.3977	0.00016248	0.59806	0.00024433	0.99576	0.00040681	408.54407096939843	13.384	0.59533	13.483	13.185	13.78	0.09944					62	18	5	0	0	0	0.49886	3	5581	5500;5581;5620		18.721	2.1553	1	12986000			8405	1155	4038	4060	10338;10339;10340	10339					0.007070312492032826
GSVDFQRTWK	10	Unmodified	_GSVDFQRTWK_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.8788024783134	3	408.543767	1222.60947	-0.41577	-0.00016986	1.1297	0.00046155	0.71397	0.00029169	408.54427750083966	12.999	0.56661	13.725	13.473	14.04	0.72639					54	17	4	0	0	0	0.8325	1	5351	5351		5.0475	1.4605	1	8421300			8406	1155	4038	4060	10341	10341					0.007070312492032826
GSVDFQRTWK	10	Unmodified	_GSVDFQRTWK_					0	0	0		nc|ENSG00000091879|O15123-2|ANGPT2;ENSG00000091879|ENST00000629816|ANGPT2;nc|ENSG00000091879|O15123|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	nc|ENSG00000091879|O15123-2|ANGPT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5438720583916	3	408.543767	1222.60947	0.032474	1.3267E-05	0.91196	0.00037258	0.94443	0.00038584	408.5441732319128	12.746	0.55992	13.533	13.303	13.863	0.78751					51	18	4	0	0	0	0.70618	1	5327	5327		11.518	3.2314	1	3462600			8407	1155	4038	4060	10342	10342					0.007070312492032826
GSVHVTLCGT	10	Unmodified	_GSVHVTLCGT_					0	0	0		ENST00000518010.5_1_8:134269105-134296554:-|nuORF;ENSG00000104419|ENST00000323851|NDRG1;E2F5-NDRG1|1|fusion	ENST00000518010.5_1_8:134269105-134296554:-|nuORF	ENST00000518010.5_1_8:134269105-134296554:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1636840701103	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.796	1	87.796	87.296	88.296	0								0	0	0	0.66222	1	36696	36696		0.69767	0.29695	1				8408	436	4039	4061	10343	10343					-0.017470493596420056
GSVLERVTAF	10	Unmodified	_GSVLERVTAF_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2014953494072	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.787	1	13.574	13.074	14.074	0.78751								0	0	0	0.66031	1	5304	5304		1.9064	0.1641	1		+		8409	10829	4040	4062	10344	10344					0.046171279889904326
GSWEVIEGYR	10	Unmodified	_GSWEVIEGYR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	598.2939941287041	2	598.290745	1194.56694	2.1998	0.0013161	0.90644	0.00054232	3.1063	0.0018585	598.2915961541966	44.19	0.31357	44.19	44.035	44.349	0					15	9	2	0	0	0	0.42124	1	18497	18497		32.037	20.543	1	455900			8410	3217	4041	4063	10345	10345					-0.022563638790188634
GSYDFRVR	8	Unmodified	_GSYDFRVR_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2549316287041	2	500.253966	998.493378	3.2421	0.0016219	3.2507	0.0016262	6.4928	0.0032481	500.2553041635094	100.67	0.15335	100.85	100.76	100.91	0.18047					12	4	3	0	0	0	0.89008	1	42347	42347		2.5775	0	1	7396000	+		8411	15323	4042	4064	10346	10346					-0.00592867530804142
GSYDFRVR	8	Unmodified	_GSYDFRVR_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2575561404228	2	500.253966	998.493378	3.0387	0.0015201	2.2828	0.001142	5.3214	0.0026621	500.2548861500399	100.59	0.17957	100.79	100.69	100.87	0.20527					12	5	3	0	0	0	0.89008	1	42291	42291		2.5775	0.27475	1	8734700	+		8412	15323	4042	4064	10347	10347					-0.00592867530804142
GSYDFRVR	8	Unmodified	_GSYDFRVR_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	500.253966	998.493378	3.2421	0.0016219	3.2507	0.0016262	6.4928	0.0032481	500.2553041635094	100.67	0.15335	100.85	100.76	100.91	0.18047	0.03081	0.00055298	NaN	2.5775	12	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7396000	+		8413	15323	4042	4064							-0.00592867530804142
GSYDFRVR	8	Unmodified	_GSYDFRVR_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	500.253966	998.493378	3.0387	0.0015201	2.2828	0.001142	5.3214	0.0026621	500.2548861500399	100.59	0.17957	100.79	100.69	100.87	0.20527	-0.03081	-0.00041545	NaN	2.5775	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8734700	+		8414	15323	4042	4064							-0.00592867530804142
GTACEMCWP	9	Unmodified	_GTACEMCWP_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MSMS	GG20161007_CRH_Patient100_A02_01	1	333.1230346560478	3	333.124058	996.350344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.172	1	97.172	96.672	97.672	0								0	0	0	0.42693	1	40625	40625		2.7352	0	1				8415	2700	4043	4065	10348	10348					-0.1479770230023405
GTFGIFAIF	9	Unmodified	_GTFGIFAIF_					0	0	0			REV__tr|A0A7D6ZT74|A0A7D6ZT74_9CLOTNCS2familypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10360PE=3SV=1	REV__tr|A0A7D6ZT74|A0A7D6ZT74_9CLOTNCS2familypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10360PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.3471862673759	2	486.763104	971.511654	3.237	0.0015757	-3.5628	-0.0017342	-0.32578	-0.00015858	486.76163117783807	96.104	0.17941	96.506	96.398	96.577	0.40208					10	5	2	0	0	0	0.11645	1	40389	40389		8.5933	0.68312	1	3554600	+		8416	15712	4044	4066	10349	10349					0.024758743911775127
GTFGIFAIF	9	Unmodified	_GTFGIFAIF_					0	0	0			REV__tr|A0A7D6ZT74|A0A7D6ZT74_9CLOTNCS2familypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10360PE=3SV=1	REV__tr|A0A7D6ZT74|A0A7D6ZT74_9CLOTNCS2familypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10360PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	486.763104	971.511654	3.9632	0.0019292	-6.1025	-0.0029705	-2.1392	-0.0010413	486.7602976818575	96.29	0.18462	96.711	96.572	96.756	0.4212	0.10238	-0.001211	NaN	8.5933	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2639500	+		8417	15712	4044	4066							0.024758743911775127
GTGLALYAL	9	Unmodified	_GTGLALYAL_					0	0	0			REV__nc|ENSG00000124780|Q96T54-4|KCNK17	REV__nc|ENSG00000124780|Q96T54-4|KCNK17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	878.5004150271416	1	878.498195	877.490919	2.1062	0.0018503	0.25731	0.00022605	2.3635	0.0020763	878.4986289438108	62.32	0.3429	62.32	62.118	62.461	0					17	10	2	0	0	0	0.076627	1	25989	25989		57.471	3.8958	1	1222900	+		8418	9656	4045	4067	10350	10350					0.04727284011505617
GTHIKLWK	8	Unmodified	_GTHIKLWK_					0	0	0		ENSG00000166912|ENST00000435680|MTMR10;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENST00000566338.5_1_15:31233675-31240771:-|nuORF	ENSG00000166912|ENST00000435680|MTMR10	ENSG00000166912|ENST00000435680|MTMR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7954284548759	2	491.795269	981.575986	0.99299	0.00048835	1.458	0.00071706	2.451	0.0012054	491.7950287094038	31.123	0.44264	32.948	32.712	33.155	1.8246					24	14	2	0	0	0	0.87935	1	13050	13050		9.3474	0.75416	1	1925200			8419	3934	4046	4068	10351	10351					0.08446074267988024
GTHIKLWK	8	Unmodified	_GTHIKLWK_					0	0	0		ENSG00000166912|ENST00000435680|MTMR10;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENST00000566338.5_1_15:31233675-31240771:-|nuORF	ENSG00000166912|ENST00000435680|MTMR10	ENSG00000166912|ENST00000435680|MTMR10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	491.795269	981.575986	1.1763	0.00057851	2.0357	0.0010012	3.2121	0.0015797	491.7959331921709	33.039	0.45241	33.039	32.844	33.296	0	0.030945	0.00062172	NaN	9.3474	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3732700			8420	3934	4046	4068							0.08446074267988024
GTHIKLWK	8	Unmodified	_GTHIKLWK_					0	0	0		ENSG00000166912|ENST00000435680|MTMR10;ENST00000567567.5_1_15:31233675-31258111:-|nuORF;ENST00000566338.5_1_15:31233675-31240771:-|nuORF	ENSG00000166912|ENST00000435680|MTMR10	ENSG00000166912|ENST00000435680|MTMR10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	491.795269	981.575986	1.9608	0.0009643	0.17723	8.7162E-05	2.138	0.0010515	491.79495883205124	32.83	0.31792	33.124	32.959	33.276	0.29431	0.1163	-0.0012063	NaN	9.3474	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3581200			8421	3934	4046	4068							0.08446074267988024
GTHYWNKEWHH	11	Unmodified	_GTHYWNKEWHH_					0	0	0		ENST00000519217.1_1_8:105441771-105456521:-|nuORF;ENSG00000147647|ENST00000351513|DPYS	ENST00000519217.1_1_8:105441771-105456521:-|nuORF	ENST00000519217.1_1_8:105441771-105456521:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.0995971560478	4	374.421997	1493.65888	-1.7404	-0.00065166	-1.1756	-0.00044016	-2.916	-0.0010918	374.6720878100618	13.242	0.31009	13.242	13.177	13.487	0					19	9	3	0	0	0	0.14606	1	5575	5575		0.50596	0.051438	1	676150			8422	3189	4047	4069	10352	10352					-0.06820260741983475
GTIDAHMQVF	10	Unmodified	_GTIDAHMQVF_					0	0	0			REV__nc|ENSG00000172456|Q96C11-4|FGGY	REV__nc|ENSG00000172456|Q96C11-4|FGGY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2696411013603	2	559.768591	1117.52263	2.5246	0.0014132	3.3468	0.0018734	5.8714	0.0032866	559.7742356081283	75.975	0.48248	77.269	77.006	77.488	1.2938					36	15	3	0	0	0	0.60583	1	31912	31912		22.736	0.98964	1	6308000	+		8423	11065	4048	4070	10353	10353					-0.031430912968289704
GTIGLIHAV	9	Unmodified	_GTIGLIHAV_					0	0	0		ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF	ENSG00000154277|ENST00000284440|UCHL1	ENSG00000154277|ENST00000284440|UCHL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	440.7676269412041	2	440.766178	879.517802	2.1975	0.0009686	1.1275	0.00049696	3.325	0.0014656	440.76631730880104	41.357	0.30867	41.674	41.549	41.857	0.31683					25	10	3	0	0	0	0.11911	2	17392	17353;17392		42.968	16.627	1	1413000			8424	3382	4049	4071	10354;10355	10355					0.07322392622711504
GTIGLIHAV	9	Unmodified	_GTIGLIHAV_					0	0	0		ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF	ENSG00000154277|ENST00000284440|UCHL1	ENSG00000154277|ENST00000284440|UCHL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.7660095095634	2	440.766178	879.517802	2.5559	0.0011266	-2.5462	-0.0011223	0.0096629	4.2591E-06	440.7648941083818	39.697	0.33104	41.007	40.846	41.177	1.3102					22	10	3	0	0	0	0.070759	2	16666	16626;16666		59.795	19.347	1	5126700			8425	3382	4049	4071	10356;10357	10357					0.07322392622711504
GTIGLIHAV	9	Unmodified	_GTIGLIHAV_					0	0	0		ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF	ENSG00000154277|ENST00000284440|UCHL1	ENSG00000154277|ENST00000284440|UCHL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	440.7654601931572	2	440.766178	879.517802	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.845	1	41.156	40.656	41.656	1.3102								0	0	0	0.29162	1	16712	16712		19.439	5.9311	1				8426	3382	4049	4071	10358	10358					0.07322392622711504
GTIGLIHAV	9	Unmodified	_GTIGLIHAV_					0	0	0		ENSG00000154277|ENST00000284440|UCHL1;ENST00000512419.5_1_4:41258929-41270087:+|nuORF	ENSG00000154277|ENST00000284440|UCHL1	ENSG00000154277|ENST00000284440|UCHL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.7666198611259	2	440.766178	879.517802	1.602	0.00070612	-0.50987	-0.00022473	1.0922	0.00048139	440.76586099423395	39.16	0.34244	40.996	40.848	41.19	1.8366					23	10	3	0	0	0	0.070759	2	16419	16419;16471		59.795	19.347	1	3128300			8427	3382	4049	4071	10359;10360	10359					0.07322392622711504
GTITSWVVI	9	Unmodified	_GTITSWVVI_					0	0	0		nc|ENSG00000171509|Q9HBX9-5|RXFP1;nc|ENSG00000171509|Q9HBX9-4|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;ENSG00000171509|ENST00000307765|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2798339724541	2	488.279118	974.543683	2.6817	0.0013094	2.3812	0.0011627	5.0629	0.0024721	488.27994090728026	80.277	0.31216	81.528	81.357	81.669	1.2512					14	9	3	0	0	0	0.22519	1	33704	33704		30.225	0	1	1141100			8428	4195	4050	4072	10361	10361					0.055392420743373805
GTITSWVVI	9	Unmodified	_GTITSWVVI_					0	0	0		nc|ENSG00000171509|Q9HBX9-5|RXFP1;nc|ENSG00000171509|Q9HBX9-4|RXFP1;nc|ENSG00000171509|Q9HBX9-2|RXFP1;ENSG00000171509|ENST00000307765|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	nc|ENSG00000171509|Q9HBX9-5|RXFP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	488.279118	974.543683	1.4311	0.0006988	3.6683	0.0017911	5.0994	0.0024899	488.2803947045435	79.743	0.27801	81.459	81.353	81.631	1.7167	-0.034342	0.00035327	NaN	30.225	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	794610			8429	4195	4050	4072							0.055392420743373805
GTKPRTKTV	9	Unmodified	_GTKPRTKTV_					0	0	0		nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENSG00000099290|ENST00000282633|WASHC2A	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3022949099541	2	494.300916	986.587279	2.6068	0.0012885	0.076175	3.7653E-05	2.683	0.0013262	494.30092697220897	80.494	0.58011	81.745	81.45	82.03	1.2512					68	18	5	0	0	0	0.5697	1	33853	33853		12.532	0	1	104910000			8430	1203	4051	4073	10362	10362					0.09344851571472645
GTKPRTKTV	9	Unmodified	_GTKPRTKTV_					0	0	0		nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENSG00000099290|ENST00000282633|WASHC2A	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3010742068291	2	494.300916	986.587279	1.1906	0.00058849	0.18984	9.3836E-05	1.3804	0.00068233	494.30095493188617	80.196	1.2804	81.912	81.443	82.724	1.7167					95	41	5	0	0	0	0.5697	1	33685	33685		12.532	0	1	53493000			8431	1203	4051	4073	10363	10363					0.09344851571472645
GTKPRTKTV	9	Unmodified	_GTKPRTKTV_					0	0	0		nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENSG00000099290|ENST00000282633|WASHC2A	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	494.300916	986.587279	2.6068	0.0012885	0.076175	3.7653E-05	2.683	0.0013262	494.30092697220897	80.494	0.58011	81.745	81.45	82.03	1.2512	0.030113	0.0002302	NaN	12.532	68	18	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104910000			8432	1203	4051	4073							0.09344851571472645
GTPVVLGG	8	Unmodified	_GTPVVLGG_					0	0	0			REV__tr|A0A553SRA2|A0A553SRA2_NIACIGlycosidehydrolasefamily125proteinOS=NialliacirculansOX=1397GN=CEQ21_00695PE=4SV=1	REV__tr|A0A553SRA2|A0A553SRA2_NIACIGlycosidehydrolasefamily125proteinOS=NialliacirculansOX=1397GN=CEQ21_00695PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	350.2063476443291	2	350.205421	698.39629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.479	1	38.479	37.979	38.979	0								0	0	0	1.0178	1	16129	16129		2.5775	0	1		+		8433	15150	4052	4074	10364	10364					0.03502770260206489
GTVLPVAT	8	Unmodified	_GTVLPVAT_					0	0	0		nc|ENSG00000143373|Q8N1G0-2|ZNF687;ENSG00000143373|ENST00000336715|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2277404665947	2	379.226354	756.438155	1.431	0.00054267	3.3024	0.0012524	4.7334	0.001795	379.22751908367326	42.268	0.34266	44.189	44.041	44.384	1.9211					22	10	3	0	0	0	0.88587	1	17728	17728		5.2307	2.3415	1	4163200			8434	3027	4053	4075	10365	10365					0.05019325948694586
GTVLPVAT	8	Unmodified	_GTVLPVAT_					0	0	0		nc|ENSG00000143373|Q8N1G0-2|ZNF687;ENSG00000143373|ENST00000336715|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	379.226354	756.438155	-0.27108	-0.0001028	6.4426	0.0024432	6.1716	0.0023404	379.2293362584187	44.395	0.68986	44.395	43.873	44.563	0	0.17148	0.0015977	NaN	5.2307	38	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1962400			8435	3027	4053	4075							0.05019325948694586
GTVLPVAT	8	Unmodified	_GTVLPVAT_					0	0	0		nc|ENSG00000143373|Q8N1G0-2|ZNF687;ENSG00000143373|ENST00000336715|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	379.226354	756.438155	1.6823	0.00063798	4.0355	0.0015304	5.7178	0.0021683	379.2281871684443	43.709	0.34773	44.033	43.834	44.182	0.32388	-0.19084	-0.00022801	NaN	5.2307	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1925700			8436	3027	4053	4075							0.05019325948694586
GTVLPVAT	8	Unmodified	_GTVLPVAT_					0	0	0		nc|ENSG00000143373|Q8N1G0-2|ZNF687;ENSG00000143373|ENST00000336715|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	nc|ENSG00000143373|Q8N1G0-2|ZNF687	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	379.226354	756.438155	0.80071	0.00030365	4.6451	0.0017615	5.4458	0.0020652	379.2282132291554	42.938	0.40944	44.278	44.046	44.455	1.3399	0.053886	0.00023435	NaN	5.2307	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3871700			8437	3027	4053	4075							0.05019325948694586
GTVNGEPESL	10	Unmodified	_GTVNGEPESL_					0	0	0		ENSG00000134917|ENST00000257359|ADAMTS8	ENSG00000134917|ENST00000257359|ADAMTS8	ENSG00000134917|ENST00000257359|ADAMTS8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.7422057986259	2	501.740554	1001.46655	2.5659	0.0012874	0.82117	0.00041201	3.387	0.0016994	501.74105228382103	59.22	0.36396	60.64	60.467	60.831	1.4196					34	11	4	0	0	0	0.72878	1	24862	24862		17.113	0.1706	1	6449100			8438	2643	4054	4076	10366	10366					-0.03412020932660198
GTVNGEPESL	10	Unmodified	_GTVNGEPESL_					0	0	0		ENSG00000134917|ENST00000257359|ADAMTS8	ENSG00000134917|ENST00000257359|ADAMTS8	ENSG00000134917|ENST00000257359|ADAMTS8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7425720095634	2	501.740554	1001.46655	1.9272	0.00096695	1.5325	0.00076893	3.4597	0.0017359	501.7414505847425	58.711	0.42454	60.68	60.516	60.94	1.969					30	13	3	0	0	0	0.78468	1	24665	24665		13.906	0.39817	1	5833800			8439	2643	4054	4076	10367	10367					-0.03412020932660198
GTYPFCAEEVL	11	Unmodified	_GTYPFCAEEVL_					0	0	0			REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.7823364138603	2	614.781364	1227.54818	2.1633	0.0013299	-3.2297	-0.0019856	-1.0665	-0.00065564	614.7796295291131	49.771	0.34389	51.162	50.98	51.324	1.3911					23	10	3	0	0	0	0.96769	1	20851	20851		5.7319	0.43497	1	703870	+		8440	9283	4055	4077	10368	10368					-0.05649661565075803
GTYPFCAEEVL	11	Unmodified	_GTYPFCAEEVL_					0	0	0			REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.7780639529228	2	614.781364	1227.54818	1.6172	0.00099424	-2.8928	-0.0017784	-1.2755	-0.00078417	614.7792280832624	49.297	0.37398	51.274	51.038	51.412	1.9772					21	11	3	0	0	0	0.91768	1	20619	20619		8.7454	0.83525	1	740970	+		8441	9283	4055	4077	10369	10369					-0.05649661565075803
GTYPFCAEEVL	11	Unmodified	_GTYPFCAEEVL_					0	0	0			REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	614.781364	1227.54818	2.1633	0.0013299	-3.2297	-0.0019856	-1.0665	-0.00065564	614.7796295291131	49.771	0.34389	51.162	50.98	51.324	1.3911	-0.056098	-0.0001027	NaN	8.7454	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	703870	+		8442	9283	4055	4077							-0.05649661565075803
GTYPFCAEEVL	11	Unmodified	_GTYPFCAEEVL_					0	0	0			REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	REV__ENST00000533897.1_1_11:88027176-88029469:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	614.781364	1227.54818	1.6172	0.00099424	-2.8928	-0.0017784	-1.2755	-0.00078417	614.7792280832624	49.297	0.37398	51.274	51.038	51.412	1.9772	0.056098	0.00031164	NaN	8.7454	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740970	+		8443	9283	4055	4077							-0.05649661565075803
GVAAAEKALNG	11	Unmodified	_GVAAAEKALNG_					0	0	0			REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B	REV__nc|ENSG00000038274|Q9NZL9-3|MAT2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1857177615166	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.321	1	16.148	15.648	16.648	0.82643								0	0	0	0.63775	1	6367	6367		0.50596	0.047615	1		+		8444	8586	4056	4078	10370	10370					0.03512268437839339
GVAADLVVTV	10	Unmodified	_GVAADLVVTV_					0	0	0			REV__ENST00000537073.1_1_12:124110970-124111033:-|nuORF	REV__ENST00000537073.1_1_12:124110970-124111033:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2775146365166	2	472.276575	942.538597	2.535	0.0011972	-0.17356	-8.1967E-05	2.3614	0.0011152	472.27662451810806	63.571	0.40396	63.571	63.398	63.802	0					24	12	3	0	0	0	0.44465	1	26483	26483		30.637	1.555	1	2884400	+		8445	9327	4057	4079	10371	10371					0.06502938211701803
GVAAEALTK	9	Unmodified	_GVAAEALTK_					0	0	0		ENST00000226796.6_1_4:110736862-110737531:+|nuORF	ENST00000226796.6_1_4:110736862-110737531:+|nuORF	ENST00000226796.6_1_4:110736862-110737531:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	430.8880798220634	2	430.247818	858.481082	0.16521	7.1079E-05	-1.5594	-0.00067092	-1.3942	-0.00059984	430.24683208655364	14.538	0.17311	15.307	15.209	15.382	0.76937					9	5	2	0	0	0	0.11518	1	6052	6052		7.2892	2.0586	1	400990			8446	5539	4058	4080	10372	10372					0.04618096006129235
GVAAILVNV	9	Unmodified	_GVAAILVNV_					0	0	0		tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	tr|A0A553SRX7|A0A553SRX7_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_01895PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	428.2690612673759	2	428.268553	854.522553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.778	1	74.588	74.088	75.088	1.8101								0	0	0	0.19733	1	30533	30533		26.341	0	1				8447	16585	4059	4081	10373	10373					0.0894727676546836
GVAAYAWAP	9	Unmodified	_GVAAYAWAP_					0	0	0			REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	302.1960632205009	3	302.488711	904.444303	-1.6352	-0.00049462	-0.43122	-0.00013044	-2.0664	-0.00062506	302.48861614914335	10.988	0.38087	11.658	11.415	11.796	0.66934					30	11	3	0	0	0	0.11938	1	4490	4490		0.26902	0	1	2841400	+		8448	11293	4060	4082	10374	10374					-0.011741558197854829
GVAELGVRPGG	11	Unmodified	_GVAELGVRPGG_					0	0	0		ENSG00000162729|ENST00000314485|IGSF8;nc|ENSG00000162729|Q969P0-2|IGSF8	ENSG00000162729|ENST00000314485|IGSF8	ENSG00000162729|ENST00000314485|IGSF8	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.2822753787041	2	506.282723	1010.55089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.289	1	33.585	33.085	34.085	0.29575								0	0	0	0.63775	1	13979	13979		1.3295	0.13619	1				8449	3642	4061	4083	10375	10375					0.04603974674773781
GVAESIHLWEV	11	Unmodified	_GVAESIHLWEV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	620.3214599490166	2	620.322045	1238.62954	1.8014	0.0011174	-2.6778	-0.0016611	-0.87646	-0.00054369	620.3193769850282	63.687	0.42159	64.016	63.82	64.241	0.32899					31	13	3	0	0	0	0.0027347	2	26689	26642;26689		118.07	86.031	1	3073700			8450	784	4062	4084	10376;10377	10377					0.01976782189194637
GVAESIHLWEV	11	Unmodified	_GVAESIHLWEV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.3232299685478	2	620.322045	1238.62954	2.599	0.0016122	-0.39053	-0.00024225	2.2085	0.00137	620.3215037474373	62.441	0.42719	63.854	63.648	64.075	1.4134					37	13	4	0	0	0	0.0022445	3	26201	26153;26201;26257		149.91	113.41	1	8406900			8451	784	4062	4084	10378;10379;10380	10379					0.01976782189194637
GVAESIHLWEV	11	Unmodified	_GVAESIHLWEV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.3242065310478	2	620.322045	1238.62954	2.4364	0.0015114	-0.20927	-0.00012981	2.2272	0.0013816	620.3217047126025	61.924	0.37305	63.881	63.657	64.03	1.9571					31	11	3	0	0	0	0.0027347	3	25929	25929;25976;26035		129.77	93.266	1	5900800			8452	784	4062	4084	10381;10382;10383	10381					0.01976782189194637
GVAESIHLWEV	11	Unmodified	_GVAESIHLWEV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	620.322045	1238.62954	2.2565	0.0013998	-0.58412	-0.00036234	1.6724	0.0010374	620.321224599451	64.254	0.38387	64.254	64.046	64.43	0	0.25254	9.0759E-05	NaN	149.91	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2247600			8453	784	4062	4084							0.01976782189194637
GVAFIAAWLL	10	Unmodified	_GVAFIAAWLL_					0	0	0		tr|A0A553SI29|A0A553SI29_NIACIDUF423domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14105PE=3SV=1	tr|A0A553SI29|A0A553SI29_NIACIDUF423domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14105PE=3SV=1	tr|A0A553SI29|A0A553SI29_NIACIDUF423domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14105PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8189575076103	2	530.813128	1059.6117	2.0445	0.0010852	2.3964	0.001272	4.4408	0.0023573	530.8142953149015	69.16	2.2442	70.526	69.352	71.596	1.3657					144	72	4	0	0	0	0.84024	1	28887	28887		7.9102	1.5561	1	15337000			8454	16179	4063	4085	10384	10384					0.0842811172499296
GVAFLVIEK	9	Unmodified	_GVAFLVIEK_					0	0	0		tr|A0A7D6VT75|A0A7D6VT75_9CLOTUndecaprenyl-diphosphataseOS=ClostridiumintestinaleOX=36845GN=uppPPE=3SV=1	tr|A0A7D6VT75|A0A7D6VT75_9CLOTUndecaprenyl-diphosphataseOS=ClostridiumintestinaleOX=36845GN=uppPPE=3SV=1	tr|A0A7D6VT75|A0A7D6VT75_9CLOTUndecaprenyl-diphosphataseOS=ClostridiumintestinaleOX=36845GN=uppPPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	488.2980529665947	2	488.29731	974.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.505	1	45.505	45.005	46.005	0								0	0	0	0.42693	1	19040	19040		4.756	2.1785	1				8455	16903	4064	4086	10385	10385					0.0917611897103825
GVAHGKRG	8	Unmodified	_GVAHGKRG_					0	0	0			REV__ENST00000429775.2_1_X:70182861-70183140:+|nuORF	REV__ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845031619072	2	391.225011	780.435469	1.5538	0.00060788	0.32548	0.00012733	1.8793	0.00073522	391.2251703842945	68.505	0.91016	68.827	68.153	69.064	0.32224					54	28	3	0	0	0	2.3239	1	28771	28771		0	0	1	12823000	+		8456	11500	4065	4087	10386	10386					0.03646915334422829
GVAIARDKMP	10	Unmodified	_GVAIARDKMP_					0	0	0		ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	ENSG00000277481|ENST00000620267|PKD1L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.2950927615166	2	529.294776	1056.575	2.626	0.0013899	-2.9372	-0.0015546	-0.31119	-0.00016471	529.293396464459	87.886	0.41676	87.886	87.671	88.088	0					36	13	4	0	0	0	0.89803	1	36732	36732		1.6526	0.17072	1	2574800			8457	5474	4066	4088	10387	10387					0.0489749183677759
GVAIGIIKKL	10	Unmodified	_GVAIGIIKKL_					0	0	0		tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.2184020876884	3	337.902344	1010.6852	4.6477	0.0015705	-3.1756	-0.001073	1.4722	0.00049745	337.901429658789	88.742	0.58042	89.798	89.562	90.142	1.0562					25	17	2	0	0	0	0.12559	1	37371	37371		0.15932	0	1	279520			8458	16765	4067	4089	10388	10388					0.18028660167453836
GVAIGIIKKL	10	Unmodified	_GVAIGIIKKL_					0	0	0		tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.3436767458916	3	337.902344	1010.6852	1.8972	0.00064105	1.1945	0.00040363	3.0917	0.0010447	337.90274535277234	112.95	0.58083	113.12	113.01	113.59	0.16914					21	17	2	0	0	0	0.12556	1	48965	48965		0.13989	0	1	3080000			8459	16765	4067	4089	10389	10389					0.18028660167453836
GVAIGIIKKL	10	Unmodified	_GVAIGIIKKL_					0	0	0		tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	tr|A0A7D6VPF9|A0A7D6VPF9_9CLOTRepressorLexAOS=ClostridiumintestinaleOX=36845GN=lexAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.2179748415947	3	337.902344	1010.6852	1.1339	0.00038315	-1.0263	-0.00034677	0.10766	3.638E-05	337.90213844850524	68.98	0.89772	70.833	70.679	71.577	1.853					39	28	2	0	0	0	0.12555	1	29181	29181		2.086	1.0145	1	515410			8460	16765	4067	4089	10390	10390					0.18028660167453836
GVAITDLRPSG	11	Unmodified	_GVAITDLRPSG_					0	0	0		tr|A0A7D6VP92|A0A7D6VP92_9CLOTSerineproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17830PE=4SV=1	tr|A0A7D6VP92|A0A7D6VP92_9CLOTSerineproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17830PE=4SV=1	tr|A0A7D6VP92|A0A7D6VP92_9CLOTSerineproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17830PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3043090701103	2	543.301113	1084.58767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.694	1	47.024	46.524	47.524	0.33034								0	0	0	0.63775	1	19591	19591		1.3295	0.5359	1				8461	16759	4068	4090	10391	10391					0.04876226500641678
GVAITYVCKV	10	Unmodified	_GVAITYVCKV_					0	0	0		tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.7912475466728	2	526.794078	1051.5736	1.923	0.001013	-2.2332	-0.0011764	-0.31025	-0.00016344	526.7932205521194	45.874	0.25292	46.203	46.08	46.333	0.32899					10	7	2	0	0	0	0.84024	1	19229	19229		7.9102	0.62092	1	413730			8462	16961	4069	4091	10392	10392					0.049878577480058084
GVAKKTEI	8	Unmodified	_GVAKKTEI_					0	0	0		tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.2564575076103	2	423.258185	844.501818	1.7233	0.00072941	-2.4634	-0.0010427	-0.7401	-0.00031325	423.2562944944814	69.166	0.34476	69.488	69.312	69.657	0.32224					14	10	2	0	0	0	0.89008	1	28972	28972		2.5775	0	1	416960			8463	16880	4070	4092	10393	10393					0.07334686385797795
GVAKKTEI	8	Unmodified	_GVAKKTEI_					0	0	0		tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	tr|A0A7D6VSQ5|A0A7D6VSQ5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05950PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	423.258185	844.501818	0.72005	0.00030477	-0.75738	-0.00032057	-0.037323	-1.5797E-05	423.25748974174996	69.311	0.31079	69.311	69.109	69.42	0	-0.088766	0.00061717	NaN	2.5775	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	766100			8464	16880	4070	4092							0.07334686385797795
GVALGHLK	8	Unmodified	_GVALGHLK_					0	0	0		ENSG00000283199|ENST00000636427|C13orf46	ENSG00000283199|ENST00000636427|C13orf46	ENSG00000283199|ENST00000636427|C13orf46	MSMS	GG20161007_CRH_Patient100_A02_02	2	397.7509948611259	2	397.747788	793.481023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.688	1	97.779	97.279	98.279	0.090881								0	0	0	1.0178	1	40874	40874		2.3027	0	1				8465	5485	4071	4093	10394	10394					0.07602140796802814
GVALLENE	8	Unmodified	_GVALLENE_					0	0	0		nc|ENSG00000146530|Q8N2E2-3|VWDE;ENSG00000146530|ENST00000275358|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.7267944216728	2	422.724175	843.433798	2.6402	0.0011161	3.2477	0.0013729	5.8879	0.002489	422.72548477980985	44.8	0.25035	46.165	46.023	46.274	1.3653					11	7	2	0	0	0	0.88958	1	18785	18785		2.8892	0.31174	1	612270			8466	3157	4072	4094	10395	10395					0.005818167351435477
GVALLENE	8	Unmodified	_GVALLENE_					0	0	0		nc|ENSG00000146530|Q8N2E2-3|VWDE;ENSG00000146530|ENST00000275358|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	422.724175	843.433798	1.0282	0.00043463	4.9373	0.0020871	5.9654	0.0025217	422.7260818240795	45.994	0.25166	45.994	45.819	46.07	0	-0.021589	0.0012407	NaN	2.8892	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607330			8467	3157	4072	4094							0.005818167351435477
GVALLENE	8	Unmodified	_GVALLENE_					0	0	0		nc|ENSG00000146530|Q8N2E2-3|VWDE;ENSG00000146530|ENST00000275358|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	422.724175	843.433798	2.0591	0.00087044	2.6296	0.0011116	4.6887	0.001982	422.7250896280459	45.45	0.28433	45.779	45.641	45.926	0.32899	-0.2365	-0.00071032	NaN	2.8892	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487420			8468	3157	4072	4094							0.005818167351435477
GVALLENE	8	Unmodified	_GVALLENE_					0	0	0		nc|ENSG00000146530|Q8N2E2-3|VWDE;ENSG00000146530|ENST00000275358|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	422.724175	843.433798	2.2772	0.00096265	1.9629	0.00082977	4.2402	0.0017924	422.7250387845985	44.181	0.2822	46.125	45.957	46.239	1.9438	0.10885	-0.001274	NaN	2.8892	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	506130			8469	3157	4072	4094							0.005818167351435477
GVALRMKRTRR	11	Unmodified	_GVALRMKRTRR_					0	0	0			REV__ENST00000474287.5_1_3:133465176-133472639:+|nuORF	REV__ENST00000474287.5_1_3:133465176-133472639:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4068481326103	2	672.411872	1342.80919	2.0862	0.0014028	-3.8454	-0.0025857	-1.7592	-0.0011829	672.4090209203113	80.218	0.56029	80.218	79.918	80.478	0					24	17	2	0	0	0	1.0393	1	33335	33335		0.35063	0	1	635870	+		8470	13306	4073	4095	10396	10396					0.15149807715988572
GVALRVMARV	10	Unmodified	_GVALRVMARV_					0	0	0			REV__ENSG00000068394|ENST00000156109|GPKOW	REV__ENSG00000068394|ENST00000156109|GPKOW	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1640502810478	2	536.326411	1070.63827	1.6647	0.00089281	-0.041766	-2.24E-05	1.6229	0.00087041	536.3266340447981	41.515	0.3207	41.515	41.338	41.659	0					21	9	3	0	0	0	0.12554	1	17337	17337		1.8442	0	1	3363700	+		8471	8702	4074	4096	10397	10397					0.10577477344668296
GVANAAAK	8	Unmodified	_GVANAAAK_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	701.3937255740166	1	701.394064	700.386788	2.288	0.0016048	-2.9251	-0.0020516	-0.63711	-0.00044687	701.3920419156136	60.132	0.37067	60.132	59.977	60.348	0					20	12	2	0	0	0	0.88504	2	25052	25052;25114		5.7604	0	1	2469000			8472	2309	4075	4097	10398;10399	10398					0.02461001974654664
GVANAAAK	8	Unmodified	_GVANAAAK_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	701.394064	700.386788	2.2447	0.0015744	-2.186	-0.0015332	0.058714	4.1182E-05	701.39258158399	59.871	0.41277	60.199	60.029	60.442	0.32809	-0.11376	0.00033432	NaN	5.7604	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1714200			8473	2309	4075	4097							0.02461001974654664
GVANAAAK	8	Unmodified	_GVANAAAK_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	701.394064	700.386788	1.4757	0.0010351	-2.7018	-0.001895	-1.226	-0.00085992	701.3921666520641	58.97	0.30099	60.39	60.166	60.467	1.4196	0.07751	-2.7431E-05	NaN	5.7604	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2231800			8474	2309	4075	4097							0.02461001974654664
GVANAAAK	8	Unmodified	_GVANAAAK_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	701.394064	700.386788	1.1027	0.0007734	-3.156	-0.0022136	-2.0533	-0.0014402	701.3919624592178	58.56	0.35401	60.529	60.279	60.633	1.969	0.2167	-0.000346	NaN	5.7604	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2118900			8475	2309	4075	4097							0.02461001974654664
GVAPKAVL	8	Unmodified	_GVAPKAVL_					0	0	0		nc|ENSG00000160856|Q96P31-4|FCRL3;ENST00000480682.5_1_1:157667440-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-5|FCRL3;ENST00000494724.5_1_1:157667081-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-2|FCRL3;nc|ENSG00000160856|Q96P31-7|FCRL3;ENSG00000160856|ENST00000368184|FCRL3;nc|ENSG00000160856|Q96P31-3|FCRL3;nc|ENSG00000160856|Q96P31-6|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7462036013603	2	377.744714	753.474875	2.3343	0.00088176	1.9497	0.00073647	4.2839	0.0016182	377.74521705315453	69.897	1.4148	71.735	70.783	72.198	1.8378					61	44	2	0	0	0	0.88587	1	29396	29396		5.2307	0.47466	1	6872900			8476	3579	4076	4098	10400	10400					0.08827622565274851
GVAPKAVL	8	Unmodified	_GVAPKAVL_					0	0	0		nc|ENSG00000160856|Q96P31-4|FCRL3;ENST00000480682.5_1_1:157667440-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-5|FCRL3;ENST00000494724.5_1_1:157667081-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-2|FCRL3;nc|ENSG00000160856|Q96P31-7|FCRL3;ENSG00000160856|ENST00000368184|FCRL3;nc|ENSG00000160856|Q96P31-3|FCRL3;nc|ENSG00000160856|Q96P31-6|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	377.744714	753.474875	1.6563	0.00062565	3.8809	0.001466	5.5372	0.0020916	377.7459279091807	71.95	1.6534	72.275	71.02	72.674	0.32494	0.29932	0.00066589	NaN	5.2307	116	51	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7718500			8477	3579	4076	4098							0.08827622565274851
GVAPKAVL	8	Unmodified	_GVAPKAVL_					0	0	0		nc|ENSG00000160856|Q96P31-4|FCRL3;ENST00000480682.5_1_1:157667440-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-5|FCRL3;ENST00000494724.5_1_1:157667081-157670285:-|nuORF;nc|ENSG00000160856|Q96P31-2|FCRL3;nc|ENSG00000160856|Q96P31-7|FCRL3;ENSG00000160856|ENST00000368184|FCRL3;nc|ENSG00000160856|Q96P31-3|FCRL3;nc|ENSG00000160856|Q96P31-6|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	nc|ENSG00000160856|Q96P31-4|FCRL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	377.744714	753.474875	2.1772	0.00082241	3.1292	0.001182	5.3063	0.0020044	377.74577034532587	70.564	0.67022	71.918	71.521	72.191	1.3536	-0.058063	9.7967E-05	NaN	5.2307	56	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10090000			8478	3579	4076	4098							0.08827622565274851
GVARKRRPW	9	Unmodified	_GVARKRRPW_					0	0	0			REV__nc|ENSG00000140534|Q7Z2Z1-2|TICRR	REV__nc|ENSG00000140534|Q7Z2Z1-2|TICRR	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3402587771416	2	563.341241	1124.66793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.315	1	46.644	46.144	47.144	0.32899								0	0	0	0.42693	1	19435	19435		0.6015	0.076735	1		+		8479	10129	4077	4099	10401	10401					0.11058177405038805
GVARRWRRRQG	11	Unmodified	_GVARRWRRRQG_					0	0	0			REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6091491580009	3	466.608098	1396.80247	3.2419	0.0015127	0.081035	3.7812E-05	3.3229	0.0015505	466.6080431332682	85.09	1.6077	85.343	84.367	85.975	0.25227					86	50	2	0	0	0	1.0393	1	35381	35381		0.094841	0	1	1211800	+		8480	12625	4078	4100	10402	10402					0.11993630879601369
GVARRWRRRQG	11	Unmodified	_GVARRWRRRQG_					0	0	0			REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	699.4134399294853	2	699.408509	1396.80247	2.5356	0.0017734	-0.31746	-0.00022203	2.2181	0.0015514	699.4080920657195	87.117	1.2908	87.36	87.195	88.486	0.24387					86	43	3	0	0	0	1.0393	1	36849	36849		0.35063	0	1	3164400	+		8481	12625	4078	4100	10403	10403					0.11993630879601369
GVARRWRRRQG	11	Unmodified	_GVARRWRRRQG_					0	0	0			REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	REV__ENST00000367330.5_1_1:201123337-201123409:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	466.6109191775322	3	466.608098	1396.80247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.156	1	88.651	88.151	89.151	1.4953								0	0	0	0.63775	1	36744	36744		0.094841	0	1		+		8482	12625	4078	4100	10404	10404					0.11993630879601369
GVARTRVLS	9	Unmodified	_GVARTRVLS_					0	0	0			REV__ENST00000543879.6_1_15:35148995-35166226:-|nuORF	REV__ENST00000543879.6_1_15:35148995-35166226:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.7934448122978	2	479.793258	957.571963	2.1107	0.0010127	-0.83365	-0.00039998	1.277	0.00061271	479.7928109753818	76.02	1.217	76.02	75.439	76.656	0					82	38	3	0	0	0	0.83753	1	31495	31495		1.8442	1.0506	1	3896800	+		8483	8558	4079	4101	10405	10405					0.0914798477426757
GVAVAKGH	8	Unmodified	_GVAVAKGH_					0	0	0		ENST00000278559.7_1_11:76796081-76823747:+|nuORF;ENST00000456580.6_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	738.4304077029228	1	738.425699	737.418422	2.4868	0.0018363	2.853	0.0021067	5.3398	0.003943	738.4279774325225	105.34	0.098946	105.5	105.43	105.53	0.15859					9	4	3	0	0	0	0.89008	1	44855	44855		2.5775	1.7838	1	12210000			8484	5693	4080	4102	10406	10406					0.039209947286167335
GVAVAKGH	8	Unmodified	_GVAVAKGH_					0	0	0		ENST00000278559.7_1_11:76796081-76823747:+|nuORF;ENST00000456580.6_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	738.425699	737.418422	2.6781	0.0019776	0.27706	0.00020458	2.9551	0.0021821	738.4260855495692	105.32	0.078247	105.48	105.42	105.5	0.16679	-0.0067872	-0.0012374	NaN	2.5775	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8167700			8485	5693	4080	4102							0.039209947286167335
GVAVCWYQS	9	Unmodified	_GVAVCWYQS_					0	0	0			REV__ENST00000350459.8_1_3:43591329-43596827:-|nuORF	REV__ENST00000350459.8_1_3:43591329-43596827:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.1566650271416	3	338.156744	1011.4484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.863	1	81.579	81.079	82.079	1.7167								0	0	0	0.42693	1	33496	33496		1.1933	0	1		+		8486	12530	4081	4103	10407	10407					-0.0568643438836034
GVAVETKIL	9	Unmodified	_GVAVETKIL_					0	0	0		ENST00000594099.5_2_19:14638565-14640206:-|nuORF	ENST00000594099.5_2_19:14638565-14640206:-|nuORF	ENST00000594099.5_2_19:14638565-14640206:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2879516482353	2	465.286943	928.559333	1.5669	0.00072906	-1.727	-0.00080356	-0.1601	-7.4494E-05	465.2858669506745	70.616	0.42434	72.454	72.228	72.653	1.8378					33	13	3	0	0	0	0.51832	1	29701	29701		14.582	5.2343	1	7021000			8487	7506	4082	4104	10408	10408					0.09219528591370363
GVAVLVRHL	9	Unmodified	_GVAVLVRHL_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.3074218630791	2	482.308544	962.602535	1.7952	0.00086586	-3.1934	-0.0015402	-1.3982	-0.00067435	482.3070614190771	70.94	0.57214	70.94	70.842	71.415	0					21	17	2	0	0	0	0.82604	1	29572	29572		2.3027	1.5091	1	714260			8488	5026	4083	4105	10409	10409					0.1197376315932388
GVAVLVRHL	9	Unmodified	_GVAVLVRHL_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	482.308544	962.602535	2.2116	0.0010667	-2.0904	-0.0010082	0.12119	5.8451E-05	482.30756438236	70.835	0.44267	71.158	70.893	71.336	0.32359	-0.0091366	-0.00012439	NaN	2.3027	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1230000			8489	5026	4083	4105							0.1197376315932388
GVAVLVRHL	9	Unmodified	_GVAVLVRHL_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	482.308544	962.602535	2.7315	0.0013174	1.5064	0.00072655	4.2379	0.002044	482.30998006482895	69.809	0.40739	71.163	71.021	71.429	1.3536	-0.0046361	0.0033452	NaN	2.3027	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	759790			8490	5026	4083	4105							0.1197376315932388
GVAVLVRHL	9	Unmodified	_GVAVLVRHL_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	482.308544	962.602535	2.0882	0.0010072	-0.034399	-1.6591E-05	2.0538	0.00099056	482.3082008489494	69.556	0.31538	71.409	71.168	71.484	1.853	0.24123	0.0018589	NaN	2.3027	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708470			8491	5026	4083	4105							0.1197376315932388
GVAVPRGPLTI	11	Unmodified	_GVAVPRGPLTI_					0	0	0			REV__tr|A0A553SK55|A0A553SK55_NIACIPhenylalanine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=pheSPE=3SV=1	REV__tr|A0A553SK55|A0A553SK55_NIACIPhenylalanine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=pheSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3321411013603	2	540.332216	1078.64988	1.5162	0.00081928	-1.485	-0.00080239	0.03125	1.6885E-05	540.3316965259384	67.303	0.99051	67.303	66.99	67.98	0					49	31	2	0	0	0	1.0031	1	28042	28042		3.5965	0.31518	1	928520	+		8492	14934	4084	4106	10410	10410					0.11369997639667417
GVAVPRGPLTI	11	Unmodified	_GVAVPRGPLTI_					0	0	0			REV__tr|A0A553SK55|A0A553SK55_NIACIPhenylalanine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=pheSPE=3SV=1	REV__tr|A0A553SK55|A0A553SK55_NIACIPhenylalanine--tRNAligasealphasubunitOS=NialliacirculansOX=1397GN=pheSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3326293826103	2	540.332216	1078.64988	1.9151	0.0010348	-2.1296	-0.0011507	-0.21457	-0.00011594	540.3310747216185	68.672	2.14	70.525	69.626	71.766	1.853					98	68	2	0	0	0	0.95124	1	28658	28658		6.7232	1.9672	1	2951700	+		8493	14934	4084	4106	10411	10411					0.11369997639667417
GVCCLHCI	8	Unmodified	_GVCCLHCI_					0	0	0			REV__ENST00000355739.8_3_13:103498466-103498565:+|nuORF	REV__ENST00000355739.8_3_13:103498466-103498565:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.1865722537041	2	424.184794	846.355036	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.256	1	27.528	27.028	28.028	1.2715								0	0	0	1.0178	1	10995	10995		0.79363	0	1		+		8494	12546	4085	4107	10412	10412					-0.07428773366814312
GVCCLHCI	8	Unmodified	_GVCCLHCI_					0	0	0			REV__ENST00000355739.8_3_13:103498466-103498565:+|nuORF	REV__ENST00000355739.8_3_13:103498466-103498565:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.1842834353447	2	424.184794	846.355036	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.577	1	27.848	27.348	28.348	1.2715								0	0	0	1.0178	1	11129	11129		0.79363	0	1		+		8495	12546	4085	4107	10413	10413					-0.07428773366814312
GVCCSTTT	8	Unmodified	_GVCCSTTT_					0	0	0			REV__ENST00000256412.8_1_8:24241976-24249777:+|nuORF	REV__ENST00000256412.8_1_8:24241976-24249777:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	386.1540405154228	2	386.154214	770.293875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.742	1	23.984	23.484	24.484	0.24251								0	0	0	1.0178	1	9901	9901		0.79363	0	1		+		8496	12164	4086	4108	10414	10414					-0.10046006865263735
GVCGRGRG	8	Unmodified	_GVCGRGRG_					0	0	0		nc|ENSG00000134046|Q9UBB5-3|MBD2;ENSG00000134046|ENST00000256429|MBD2	nc|ENSG00000134046|Q9UBB5-3|MBD2	nc|ENSG00000134046|Q9UBB5-3|MBD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.7267333865166	2	381.195396	760.37624	2.1395	0.00081555	2.7929	0.0010646	4.9323	0.0018802	381.1961389186663	62.586	0.3568	63.999	63.838	64.195	1.4134					24	11	3	0	0	0	2.3239	1	26315	26315		5.2307	4.437	1	4128700			8497	2591	4087	4109	10415	10415					-0.013533039514072698
GVCKPPLS	8	Unmodified	_GVCKPPLS_					0	0	0		ENST00000428449.5_1_7:121945734-121946145:+|nuORF	ENST00000428449.5_1_7:121945734-121946145:+|nuORF	ENST00000428449.5_1_7:121945734-121946145:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	800.7698242068291	1	800.433486	799.42621	1.7836	0.0014277	3.4605	0.0027699	5.2441	0.0041976	800.435562944491	43.382	0.19249	43.706	43.547	43.739	0.32388					7	5	2	0	0	0	0.89008	1	18208	18208		2.5775	1.7838	1	250700			8498	6482	4088	4110	10416	10416					0.018473859338769216
GVCPQPREWR	10	Unmodified	_GVCPQPREWR_					0	0	0		ENST00000558187.5_1_15:84748925-84782396:+|nuORF	ENST00000558187.5_1_15:84748925-84782396:+|nuORF	ENST00000558187.5_1_15:84748925-84782396:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	614.3068115115166	2	614.306207	1226.59786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.567	1	47.567	47.067	48.067	0								0	0	0	0.66166	1	19874	19874		1.6526	0	1				8499	7313	4089	4111	10417	10417					-0.006374890457891524
GVCRWHSG	8	Unmodified	_GVCRWHSG_					0	0	0		ENST00000429300.5_1_22:18905996-18910521:-|nuORF	ENST00000429300.5_1_22:18905996-18910521:-|nuORF	ENST00000429300.5_1_22:18905996-18910521:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413452029228	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.275	1	2.0234	1.5234	2.5234	0.7484								0	0	0	1.0178	1	527	527		0.45834	0	1				8500	6489	4090	4112	10418	10418					-0.05173034779943464
GVCVFRAKK	9	Unmodified	_GVCVFRAKK_					0	0	0			REV__ENSG00000173198|ENST00000373304|CYSLTR1	REV__ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	336.5304138064384	3	336.532145	1006.57461	-2.6326	-0.00088594	-2.611	-0.0008787	-5.2436	-0.0017646	336.5313678194501	18.823	0.61623	18.823	18.461	19.077	0					40	19	3	0	0	0	0.66839	1	7815	7815		5.2969	0.76802	1	1536700	+		8501	11086	4091	4113	10419	10419					0.0715811690757846
GVCVFRAKK	9	Unmodified	_GVCVFRAKK_					0	0	0			REV__ENSG00000173198|ENST00000373304|CYSLTR1	REV__ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	336.532145	1006.57461	-2.6326	-0.00088594	-2.611	-0.0008787	-5.2436	-0.0017646	336.5313678194501	18.823	0.61623	18.823	18.461	19.077	0	0.1981	0.00082061	NaN	5.2969	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1536700	+		8502	11086	4091	4113							0.0715811690757846
GVDDCGDG	8	Unmodified	_GVDDCGDG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1224243044853	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8228	1	2.8228	2.3228	3.3228	0								0	0	0	1.0178	1	1157	1157		0.79363	0.79363	1				8503	1021	4092	4114	10420	10420					-0.14528400923961726
GVDDCGDG	8	Unmodified	_GVDDCGDG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1227294802666	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6571	1	4.6571	4.1571	5.1571	0								0	0	0	1.0178	1	1913	1913		0.79363	0.79363	1				8504	1021	4092	4114	10421	10421					-0.14528400923961726
GVDDCGDG	8	Unmodified	_GVDDCGDG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1223632693291	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0342	1	6.0342	5.5342	6.5342	0								0	0	0	1.0178	1	2479	2479		0.79363	0.79363	1				8505	1021	4092	4114	10422	10422					-0.14528400923961726
GVDDCGDG	8	Unmodified	_GVDDCGDG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1218749880791	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6735	1	6.6735	6.1735	7.1735	0								0	0	0	1.0178	1	2742	2742		0.79363	0.79363	1				8506	1021	4092	4114	10423	10423					-0.14528400923961726
GVDDCGDG	8	Unmodified	_GVDDCGDG_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1221801638603	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2932	1	8.2932	7.7932	8.7932	0								0	0	0	1.0178	1	3411	3411		0.79363	0.79363	1				8507	1021	4092	4114	10424	10424					-0.14528400923961726
GVDELGLRTTA	11	Unmodified	_GVDELGLRTTA_					0	0	0			REV__NID1|p.H677Vfs*128|1|0.3|ENSG00000116962|chr1:236024169-236024170|-/AC|frameshift_variant	REV__NID1|p.H677Vfs*128|1|0.3|ENSG00000116962|chr1:236024169-236024170|-/AC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	565.8010742068291	2	566.303852	1130.59315	0.38694	0.00021912	-1.6229	-0.00091903	-1.2359	-0.0006999	566.3026786565564	18.924	0.18373	20.372	20.243	20.427	1.448					7	5	2	0	0	0	0.14606	1	7879	7879		1.3295	0	1	215450	+		8508	9486	4093	4115	10425	10425					0.03307905292490432
GVDEMDSF	8	Unmodified	_GVDEMDSF_					0	0	0		tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.1772338747978	2	450.176201	898.337848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.634	1	78.402	77.902	78.902	1.7672								0	0	0	1.0178	1	32145	32145		2.8892	2.0956	1				8509	16704	4094	4116	10426	10426					-0.11538699167249433
GVDEMFVRG	9	Unmodified	_GVDEMFVRG_					0	0	0			REV__AFF1-UBR5|1|fusion	REV__AFF1-UBR5|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2442199587822	2	505.242209	1008.46987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.52	103.02	104.02	0.059502								0	0	0	0.42693	1	43402	43402		2.0598	1.2661	1		+		8510	8092	4095	4117	10427	10427					-0.034030493596333145
GVDHMVTLAK	10	Unmodified	_GVDHMVTLAK_					0	0	0		ENST00000420642.1_7:74765936-74789271:+|nuORF;ENSG00000274523|ENST00000610322|RCC1L	ENST00000420642.1_7:74765936-74789271:+|nuORF	ENST00000420642.1_7:74765936-74789271:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1649658083916	2	535.786784	1069.55902	1.6478	0.00088289	-1.9294	-0.0010338	-0.28158	-0.00015087	535.7860769580476	40.746	0.15905	40.746	40.668	40.827	0					8	4	2	0	0	0	0.12525	1	17040	17040		1.4819	0	1	443160			8511	5455	4096	4118	10428	10428					0.027017855998792584
GVDLKTQPVR	10	Unmodified	_GVDLKTQPVR_					0	0	0		ENSG00000254087|ENST00000519728|LYN	ENSG00000254087|ENST00000519728|LYN	ENSG00000254087|ENST00000519728|LYN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1010314822197	3	371.552262	1111.63496	-1.0022	-0.00037238	0.82717	0.00030734	-0.17507	-6.5047E-05	371.5525093509687	13.56	0.3103	14.286	14.1	14.411	0.72639					19	9	3	0	0	0	0.1256	1	5573	5573		0.69767	0.29695	1	751270			8512	5389	4097	4119	10429	10429					0.0836050577165679
GVDMTQFKL	9	Unmodified	_GVDMTQFKL_					0	0	0			REV__ENST00000414507.1_1_7:66762227-66762272:-|nuORF	REV__ENST00000414507.1_1_7:66762227-66762272:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1394531130791	2	519.76806	1037.52157	1.9897	0.0010342	0.95886	0.00049839	2.9485	0.0015325	519.767344110491	79.846	0.12636	80.147	80.069	80.195	0.30047					5	3	2	0	0	0	0.11898	1	33391	33391		2.3027	0	1	176020	+		8513	12222	4098	4120	10430	10430					0.004306943342726299
GVDPVLLK	8	Unmodified	_GVDPVLLK_					0	0	0		ENST00000466027.1_1_13:96289346-96294343:-|nuORF;nc|ENSG00000134874|Q86YF9-3|DZIP1;nc|ENSG00000134874|Q86YF9-2|DZIP1;ENSG00000134874|ENST00000376829|DZIP1	ENST00000466027.1_1_13:96289346-96294343:-|nuORF	ENST00000466027.1_1_13:96289346-96294343:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.7638122439384	2	420.763104	839.511654	0.15974	6.7214E-05	2.2453	0.00094474	2.4051	0.001012	420.76382744096736	15.735	0.1605	16.561	16.472	16.633	0.82643					22	12	2	0	0	0	0.89008	1	6526	6526		2.5775	0	1	3972900			8514	2639	4099	4121	10431	10431					0.0854787439119491
GVDPVLLK	8	Unmodified	_GVDPVLLK_					0	0	0		ENST00000466027.1_1_13:96289346-96294343:-|nuORF;nc|ENSG00000134874|Q86YF9-3|DZIP1;nc|ENSG00000134874|Q86YF9-2|DZIP1;ENSG00000134874|ENST00000376829|DZIP1	ENST00000466027.1_1_13:96289346-96294343:-|nuORF	ENST00000466027.1_1_13:96289346-96294343:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2649719119072	2	420.763104	839.511654	0.22411	9.4296E-05	1.4665	0.00061703	1.6906	0.00071133	420.7637277857038	15.639	0.11895	16.678	16.601	16.72	1.0392					16	9	2	0	0	0	0.89008	1	6479	6479		2.5775	0	1	3708000			8515	2639	4099	4121	10432	10432					0.0854787439119491
GVDPWEYVPLQ	11	Unmodified	_GVDPWEYVPLQ_					0	0	0			REV__nc|ENSG00000103707|Q96DP5-2|MTFMT	REV__nc|ENSG00000103707|Q96DP5-2|MTFMT	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8831664919853	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8359	1	1.8359	1.3359	2.3359	0								0	0	0	0.63775	1	753	753		0.45452	0	1		+		8516	9118	4100	4122	10433	10433					-0.009546375306626942
GVDRAPWLL	9	Unmodified	_GVDRAPWLL_					0	0	0		ENST00000374409.5_1_1:24684664-24685051:-|nuORF	ENST00000374409.5_1_1:24684664-24685051:-|nuORF	ENST00000374409.5_1_1:24684664-24685051:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.7913085818291	2	513.790184	1025.56581	1.2522	0.00064339	2.1504	0.0011049	3.4026	0.0017482	513.7911803061949	29.559	0.30569	29.838	29.65	29.956	0.2793					18	9	2	0	0	0	0.84531	1	12402	12402		2.3027	0.4585	1	1343400			8517	6174	4101	4123	10434	10434					0.05405466542742943
GVDTSRSKTKK	11	Unmodified	_GVDTSRSKTKK_					0	0	0			REV__ENST00000502249.6_1_4:119435248-119475252:+|nuORF	REV__ENST00000502249.6_1_4:119435248-119475252:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1802551150322	3	402.89821	1205.6728	0.74295	0.00029933	3.9202	0.0015794	4.6631	0.0018788	402.8992403636589	22.41	0.12877	23.587	23.507	23.635	1.177					5	3	2	0	0	0	0.14606	1	9354	9354		0.50596	0.23694	1	248220	+		8518	10221	4102	4124	10435	10435					0.07818971966457866
GVDVVLLSLM	10	Unmodified	_GVDVVLLSLM_					0	0	0			REV__ENSG00000179409|ENST00000319004|GEMIN4	REV__ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3053466677666	2	523.301736	1044.58892	1.7919	0.00093771	2.7263	0.0014267	4.5182	0.0023644	523.3033827690094	70.122	2.1807	70.122	69.202	71.383	0					180	69	4	0	0	0	0.87699	2	29471	29471;29701		3.9444	1.8846	1	4159100	+		8519	11278	4103	4125	10436;10437	10436					0.06840724545213561
GVDWLQDQIQT	11	Unmodified	_GVDWLQDQIQT_					0	0	0		ENSG00000113966|ENST00000463745|ARL6	ENSG00000113966|ENST00000463745|ARL6	ENSG00000113966|ENST00000463745|ARL6	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8823425173759	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.085	1	15.982	15.482	16.482	0.89664								0	0	0	0.63775	1	6258	6258		0.45452	0.1855	1				8520	1843	4104	4126	10438	10438					-0.013567270243811436
GVDYIFITVED	11	Unmodified	_GVDYIFITVED_					0	0	0		MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant;nc|ENSG00000187391|Q86UL8-2|MAGI2;ENSG00000187391|ENST00000354212|MAGI2;MAGI2|p.A263Kfs*25|1|0.1|ENSG00000187391|chr7:78501756-78501757|-/TAGGCCATTTC|frameshift_variant	MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant	MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.2123901247978	3	424.211571	1269.61288	0.75161	0.00031884	1.713	0.00072668	2.4646	0.0010455	424.2120832489897	37.917	0.32453	37.917	37.752	38.076	0					26	10	3	0	0	0	0.89163	1	15866	15866		10.315	1.0715	1	2345100			8521	4823	4105	4127	10439	10439					-0.011137634874557989
GVEDDSLC	8	Unmodified	_GVEDDSLC_					0	0	0			REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	837.3320190310478	1	837.329475	836.322198	1.2934	0.001083	1.8818	0.0015757	3.1752	0.0026586	837.3307439894804	98.809	0.19093	98.809	98.686	98.877	0					17	6	4	0	0	0	0.88504	1	41366	41366		5.7604	2.8712	1	97915000	+		8522	13379	4106	4128	10440	10440					-0.1025098568429712
GVEDDSLC	8	Unmodified	_GVEDDSLC_					0	0	0			REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	837.3323242068291	1	837.329475	836.322198	3.0356	0.0025418	3.5473	0.0029703	6.5829	0.005512	837.3323623970465	98.44	0.20045	98.696	98.565	98.765	0.25636					14	6	3	0	0	0	0.89008	1	41416	41416		2.5775	0.27475	1	44310000	+		8523	13379	4106	4128	10441	10441					-0.1025098568429712
GVEDDSLC	8	Unmodified	_GVEDDSLC_					0	0	0			REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	837.329475	836.322198	3.0356	0.0025418	3.5473	0.0029703	6.5829	0.005512	837.3323623970465	98.44	0.20045	98.696	98.565	98.765	0.25636	-0.036024	-0.00072071	NaN	2.5775	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44310000	+		8524	13379	4106	4128							-0.1025098568429712
GVEELRRRRR	10	Unmodified	_GVEELRRRRR_					0	0	0		ENST00000514449.5_1_5:140019112-140019241:+|nuORF;ENST00000511410.5_1_5:140019112-140021405:+|nuORF;ENSG00000113119|ENST00000394671|TMCO6;nc|ENSG00000113119|Q96DC7-2|TMCO6	ENST00000514449.5_1_5:140019112-140019241:+|nuORF	ENST00000514449.5_1_5:140019112-140019241:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8967773318291	2	663.8949	1325.77525	2.1065	0.0013985	2.102	0.0013955	4.2085	0.002794	663.8962104692251	80.085	0.74905	80.085	79.887	80.636	0					42	23	2	0	0	0	0.89803	1	33515	33515		0.45834	0	1	1092100			8525	1807	4107	4129	10442	10442					0.12539102548589653
GVEFTVHVAL	10	Unmodified	_GVEFTVHVAL_					0	0	0		nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1;ENST00000375290.6_3_9:98215758-98232201:-|nuORF;PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant;nc|ENSG00000117425|Q9Y6C5-2|PTCH2;PTCH1|p.S1176Yfs*8|1|0.05|ENSG00000185920|chr9:95449863-95449864|-/T|frameshift_variant;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000185920|Q13635-4|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1613647341728	2	536.295299	1070.57605	1.9438	0.0010425	1.4447	0.0007748	3.3885	0.0018173	536.296357903667	41.847	0.19422	43.74	43.573	43.767	1.8927					9	5	2	0	0	0	0.12539	1	17488	17488		1.8442	1.4435	1	605130			8526	4772	4108	4130	10443	10443					0.043580294773164496
GVEFTVHVAL	10	Unmodified	_GVEFTVHVAL_					0	0	0		nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1;ENST00000375290.6_3_9:98215758-98232201:-|nuORF;PTCH2|p.D1064Efs*30|1|0.17|ENSG00000117425|chr1:44823308-44823309|-/CTTTGCCCCTCTGCCTTGCCGTT|frameshift_variant;nc|ENSG00000117425|Q9Y6C5-2|PTCH2;PTCH1|p.S1176Yfs*8|1|0.05|ENSG00000185920|chr9:95449863-95449864|-/T|frameshift_variant;ENSG00000117425|ENST00000372192|PTCH2	nc|ENSG00000185920|Q13635-4|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	536.295299	1070.57605	1.9829	0.0010634	0.62061	0.00033283	2.6035	0.0013963	536.2960918923053	42.363	0.25769	43.703	43.539	43.796	1.3399	-0.018287	-0.00024891	NaN	1.8442	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497810			8527	4772	4108	4130							0.043580294773164496
GVEGGGCC	8	Unmodified	_GVEGGGCC_					0	0	0		ENST00000370008.3_1_1:109289315-109289390:+|nuORF	ENST00000370008.3_1_1:109289315-109289390:+|nuORF	ENST00000370008.3_1_1:109289315-109289390:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2321044802666	1	681.233072	680.225796	1.0789	0.00073498	-4.3977	-0.0029958	-3.3188	-0.0022609	681.2311770876145	30.394	0.38379	30.68	30.469	30.853	0.2859					18	12	2	0	0	0	0.89176	1	12793	12793		0.79363	0.79363	1	400350			8528	6104	4109	4131	10444	10444					-0.12710831725246408
GVEGKPNVIFL	11	Unmodified	_GVEGKPNVIFL_					0	0	0			REV__tr|A0A553SPR3|A0A553SPR3_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26870PE=3SV=1	REV__tr|A0A553SPR3|A0A553SPR3_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26870PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	586.8364745974541	2	586.837331	1171.66011	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.288	1	76.609	76.109	77.109	0.32163								0	0	0	0.63775	1	31909	31909		1.4819	0.68827	1		+		8529	15101	4110	4132	10445	10445					0.08114560574222196
GVEHELQLL	9	Unmodified	_GVEHELQLL_					0	0	0		ENST00000548316.1_1_12:41903559-41967689:+|nuORF;nc|ENSG00000165966|Q6ZMN7-4|PDZRN4;nc|ENSG00000165966|Q6ZMN7-2|PDZRN4;ENSG00000165966|ENST00000402685|PDZRN4	ENST00000548316.1_1_12:41903559-41967689:+|nuORF	ENST00000548316.1_1_12:41903559-41967689:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1401855349541	2	519.284931	1036.55531	0.8006	0.00041574	1.2773	0.00066328	2.0779	0.001079	519.2855022441278	27.913	0.21767	29.688	29.51	29.727	1.7754					9	6	2	0	0	0	0.11898	1	11652	11652		2.3027	0	1	513640			8530	3874	4111	4133	10446	10446					0.03849439097666618
GVEHELQLL	9	Unmodified	_GVEHELQLL_					0	0	0		ENST00000548316.1_1_12:41903559-41967689:+|nuORF;nc|ENSG00000165966|Q6ZMN7-4|PDZRN4;nc|ENSG00000165966|Q6ZMN7-2|PDZRN4;ENSG00000165966|ENST00000402685|PDZRN4	ENST00000548316.1_1_12:41903559-41967689:+|nuORF	ENST00000548316.1_1_12:41903559-41967689:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	519.284931	1036.55531	1.1744	0.00060987	0.59122	0.00030701	1.7657	0.00091688	519.2851429401641	28.421	0.27614	29.7	29.576	29.852	1.2789	0.006159	-0.00042095	NaN	2.3027	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231990			8531	3874	4111	4133							0.03849439097666618
GVEIEKFGV	9	Unmodified	_GVEIEKFGV_					0	0	0			REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.2719604372978	2	489.26875	976.522947	2.4951	0.0012208	2.012	0.00098443	4.5071	0.0022052	489.27051776643134	42.91	0.48025	43.233	43.065	43.545	0.32276					24	15	3	0	0	0	0.27148	1	18036	18036		26.884	1.8927	1	1181200	+		8532	15139	4112	4134	10447	10447					0.03374651694673503
GVEIEKFGV	9	Unmodified	_GVEIEKFGV_					0	0	0			REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	489.26875	976.522947	1.6916	0.00082764	3.3216	0.0016252	5.0132	0.0024528	489.27065106064936	43.36	0.34457	43.36	43.179	43.523	0	0.063396	0.00020703	NaN	26.884	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1177400	+		8533	15139	4112	4134							0.03374651694673503
GVEIEKFGV	9	Unmodified	_GVEIEKFGV_					0	0	0			REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	REV__tr|A0A553SQZ7|A0A553SQZ7_NIACI2-isopropylmalatesynthaseOS=NialliacirculansOX=1397GN=leuAPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	489.26875	976.522947	2.4951	0.0012208	2.012	0.00098443	4.5071	0.0022052	489.27051776643134	42.91	0.48025	43.233	43.065	43.545	0.32276	-0.063396	-0.0010744	NaN	26.884	24	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1181200	+		8534	15139	4112	4134							0.03374651694673503
GVEIQQRLI	9	Unmodified	_GVEIQQRLI_					0	0	0			REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3158447146416	2	528.314023	1054.61349	2.3684	0.0012512	1.2071	0.00063774	3.5755	0.001889	528.3145733558451	83.53	0.55167	83.53	83.045	83.596	0					24	17	2	0	0	0	0.82604	1	34801	34801		2.3027	0	1	612690	+		8535	15296	4113	4135	10448	10448					0.08837120742964544
GVEIQQRLI	9	Unmodified	_GVEIQQRLI_					0	0	0			REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	528.314023	1054.61349	2.3684	0.0012512	1.2071	0.00063774	3.5755	0.001889	528.3145733558451	83.53	0.55167	83.53	83.045	83.596	0	0	0	NaN	2.3027	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612690	+		8536	15296	4113	4135							0.08837120742964544
GVEKKLLLGPN	11	Unmodified	_GVEKKLLLGPN_					0	0	0		nc|ENSG00000135720|O43237-2|DYNC1LI2;ENSG00000135720|ENST00000258198|DYNC1LI2	nc|ENSG00000135720|O43237-2|DYNC1LI2	nc|ENSG00000135720|O43237-2|DYNC1LI2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3572875857353	2	584.358431	1166.70231	1.7917	0.001047	-2.8624	-0.0016727	-1.0707	-0.00062568	584.3565666148345	72.795	1.6696	72.795	71.764	73.433	0					67	52	2	0	0	0	1.0362	1	30107	30107		1.3295	0.63916	1	1868000			8537	2683	4114	4136	10449	10449					0.1256253598260173
GVEKPSSHQ	9	Unmodified	_GVEKPSSHQ_					0	0	0		ENSG00000181754|ENST00000369864|AMIGO1	ENSG00000181754|ENST00000369864|AMIGO1	ENSG00000181754|ENST00000369864|AMIGO1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	484.7887451052666	2	484.743431	967.472308	1.2101	0.0005866	-1.8602	-0.00090171	-0.65005	-0.00031511	484.74267998738577	27.216	0.24301	27.216	27.107	27.35	0					16	7	3	0	0	0	0.11916	1	11354	11354		1.8442	0.19162	1	1224900			8538	4585	4115	4137	10450	10450					-0.012728776303333689
GVELFEILY	9	Unmodified	_GVELFEILY_					0	0	0			REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1082.572680652142	1	1082.57684	1081.56956	2.5524	0.0027632	-0.5157	-0.00055829	2.0367	0.0022049	1082.5762443592325	78.653	0.24816	80.388	80.289	80.537	1.735					9	7	2	0	0	0	0.24063	1	33003	33003		28.487	10.352	1	750590	+		8539	11715	4116	4138	10451	10451					0.032040915259585745
GVELFEILY	9	Unmodified	_GVELFEILY_					0	0	0			REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1082.57684	1081.56956	2.7493	0.0029764	0.67156	0.00072701	3.4209	0.0037034	1082.5794623935208	79.114	0.2516	80.381	80.284	80.536	1.2668	-0.0033733	0.00077199	NaN	28.487	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	925730	+		8540	11715	4116	4138							0.032040915259585745
GVELFEILY	9	Unmodified	_GVELFEILY_					0	0	0			REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	REV__nc|ENSG00000198520|Q6PIY5-2|ARMH1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1082.57684	1081.56956	2.5524	0.0027632	-0.5157	-0.00055829	2.0367	0.0022049	1082.5762443592325	78.653	0.24816	80.388	80.289	80.537	1.735	0.0033733	-0.00051331	NaN	28.487	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	750590	+		8541	11715	4116	4138							0.032040915259585745
GVERRRTRPR	10	Unmodified	_GVERRRTRPR_					0	0	0		ENST00000308110.8_1_11:65628088-65628496:+|nuORF	ENST00000308110.8_1_11:65628088-65628496:+|nuORF	ENST00000308110.8_1_11:65628088-65628496:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8821899294853	2	641.881793	1281.74903	1.9822	0.0012723	0.78116	0.00050141	2.7633	0.0017737	641.8820510835203	81.341	2.8576	81.632	80.778	83.635	0.29056					269	92	4	0	0	0	0.89803	1	34705	34705		0.45834	0.10771	1	11140000			8542	5785	4117	4139	10452	10452					0.11942833377088391
GVESSEEPV	9	Unmodified	_GVESSEEPV_					0	0	0		nc|ENSG00000264522|Q6GQQ9-2|OTUD7B;ENSG00000264522|ENST00000581312|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.7163574099541	2	466.714005	931.413456	2.0305	0.00094766	3.0408	0.0014192	5.0713	0.0023668	466.7147159665004	42.42	0.28859	43.76	43.602	43.891	1.3399					14	8	2	0	0	0	0.68551	1	17773	17773		7.9102	0.62092	1	541640			8543	5431	4118	4140	10453	10453					-0.05499398715323878
GVESSEEPV	9	Unmodified	_GVESSEEPV_					0	0	0		nc|ENSG00000264522|Q6GQQ9-2|OTUD7B;ENSG00000264522|ENST00000581312|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	466.714005	931.413456	2.4698	0.0011527	1.1274	0.00052616	3.5972	0.0016789	466.7142510176674	43.634	0.1887	43.958	43.803	43.992	0.32389	0.094461	-0.00069653	NaN	7.9102	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266320			8544	5431	4118	4140							-0.05499398715323878
GVESSEEPV	9	Unmodified	_GVESSEEPV_					0	0	0		nc|ENSG00000264522|Q6GQQ9-2|OTUD7B;ENSG00000264522|ENST00000581312|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	nc|ENSG00000264522|Q6GQQ9-2|OTUD7B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	466.714005	931.413456	2.0536	0.00095843	1.3845	0.00064616	3.4381	0.0016046	466.7141391098167	41.951	0.25197	43.872	43.666	43.918	1.9211	0.0088512	-0.00045654	NaN	7.9102	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603320			8545	5431	4118	4140							-0.05499398715323878
GVEVPDVEL	9	Unmodified	_GVEVPDVEL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	956.4944946169853	1	956.493504	955.486227	1.7055	0.0016313	-2.3874	-0.0022835	-0.68187	-0.00065221	956.4904980281805	59.751	0.30732	61.171	61.02	61.328	1.4196					20	9	3	0	0	0	0.023786	2	25044	25044;25098		96.285	50.264	1	1427500			8546	30	4119	4141	10454;10455	10454					0.006703550781026024
GVEVPDVEL	9	Unmodified	_GVEVPDVEL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7513610720634	2	478.75039	955.486227	2.5903	0.0012401	-1.5649	-0.00074918	1.0254	0.00049091	478.7497971388483	59.772	0.30732	61.192	61.02	61.328	1.4196					18	9	3	0	0	0	0.19075	1	25058	25058		34.102	9.4286	1	2523200			8547	30	4119	4141	10456	10456					0.006703550781026024
GVEVPDVEL	9	Unmodified	_GVEVPDVEL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	956.4951660037041	1	956.493504	955.486227	2.8368	0.0027133	-4.3405	-0.0041516	-1.5037	-0.0014383	956.4888364376014	59.36	0.30324	61.329	61.131	61.435	1.969					16	9	2	0	0	0	0.066815	2	24874	24874;24926		61.357	21.4	1	1875500			8548	30	4119	4141	10457;10458	10457					0.006703550781026024
GVEVPDVEL	9	Unmodified	_GVEVPDVEL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7499877810478	2	478.75039	955.486227	2.6687	0.0012776	-1.1811	-0.00056545	1.4876	0.00071218	478.74994714134624	59.34	0.21339	61.309	61.162	61.376	1.969					9	6	2	0	0	0	0.20671	1	24916	24916		32.305	10.559	1	1130300			8549	30	4119	4141	10459	10459					0.006703550781026024
GVEWSDIKFF	10	Unmodified	_GVEWSDIKFF_					0	0	0		ENSG00000175115|ENST00000320580|PACS1	ENSG00000175115|ENST00000320580|PACS1	ENSG00000175115|ENST00000320580|PACS1	MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3052245974541	2	614.305864	1226.59717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.563	1	48.893	48.393	49.393	0.33034								0	0	0	0.66237	1	20360	20360		0.45834	0	1				8550	4355	4120	4142	10460	10460					-0.007060052138285755
GVEYTFSLTVW	11	Unmodified	_GVEYTFSLTVW_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1;ENST00000532739.1_1_16:16461165-16462877:+|nuORF;ENST00000343738.10_1_16:15227853-15229959:-|nuORF;ENST00000532415.5_1_16:18477017-18479494:-|nuORF	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3233520388603	2	651.324254	1300.63395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.74	1	71.74	71.24	72.24	0								0	0	0	0.63775	1	29875	29875		6.2058	0.47393	1				8551	532	4121	4143	10461	10461					-0.0043375338791520335
GVEYTFSLTVW	11	Unmodified	_GVEYTFSLTVW_					0	0	0		nc|ENSG00000008710|P98161-2|PKD1;nc|ENSG00000008710|P98161-3|PKD1;ENSG00000008710|ENST00000262304|PKD1;ENST00000532739.1_1_16:16461165-16462877:+|nuORF;ENST00000343738.10_1_16:15227853-15229959:-|nuORF;ENST00000532415.5_1_16:18477017-18479494:-|nuORF	nc|ENSG00000008710|P98161-2|PKD1	nc|ENSG00000008710|P98161-2|PKD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	651.3212768435478	2	651.324254	1300.63395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.371	1	91.562	91.062	92.062	0.19042								0	0	0	0.63775	1	38273	38273		3.2813	0.28607	1				8552	532	4121	4143	10462	10462					-0.0043375338791520335
GVFAFIDVCL	10	Unmodified	_GVFAFIDVCL_					0	0	0		nc|ENSG00000140932|Q8TAZ6-2|CMTM2;ENSG00000140932|ENST00000268595|CMTM2	nc|ENSG00000140932|Q8TAZ6-2|CMTM2	nc|ENSG00000140932|Q8TAZ6-2|CMTM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2801391482353	2	542.280803	1082.54705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.243	1	41.079	40.579	41.579	1.8366								0	0	0	0.45714	1	16452	16452		26.884	1.4843	1				8553	2939	4122	4144	10463	10463					0.009081688566766388
GVFAKVKAAQ	10	Unmodified	_GVFAKVKAAQ_					0	0	0		tr|A0A553SK61|A0A553SK61_NIACIendopeptidaseLaOS=NialliacirculansOX=1397GN=lonBPE=3SV=1	tr|A0A553SK61|A0A553SK61_NIACIendopeptidaseLaOS=NialliacirculansOX=1397GN=lonBPE=3SV=1	tr|A0A553SK61|A0A553SK61_NIACIendopeptidaseLaOS=NialliacirculansOX=1397GN=lonBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8044006228447	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.152	1	67.152	66.652	67.652	0								0	0	0	0.66166	1	27968	27968		1.6526	0.17072	1				8554	16272	4123	4145	10464	10464					0.08902039576832976
GVFAVSIYRI	10	Unmodified	_GVFAVSIYRI_					0	0	0		tr|A0A7D6VML4|A0A7D6VML4_9CLOTSerineacetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14140PE=4SV=1	tr|A0A7D6VML4|A0A7D6VML4_9CLOTSerineacetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14140PE=4SV=1	tr|A0A7D6VML4|A0A7D6VML4_9CLOTSerineacetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14140PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5535156130791	3	375.553603	1123.63898	0.48542	0.0001823	-1.1154	-0.0004189	-0.63001	-0.0002366	375.5532564904258	35.863	0.50283	37.68	37.473	37.976	1.8176					66	30	3	0	0	0	0.85617	1	15121	15121		6.1918	2.5954	1	10342000			8555	16716	4124	4146	10465	10465					0.08210595265359188
GVFFIFNLLVP	11	Unmodified	_GVFFIFNLLVP_					0	0	0		tr|A0A553ST40|A0A553ST40_NIACILowtemperaturerequirementproteinAOS=NialliacirculansOX=1397GN=CEQ21_04330PE=4SV=1	tr|A0A553ST40|A0A553ST40_NIACILowtemperaturerequirementproteinAOS=NialliacirculansOX=1397GN=CEQ21_04330PE=4SV=1	tr|A0A553ST40|A0A553ST40_NIACILowtemperaturerequirementproteinAOS=NialliacirculansOX=1397GN=CEQ21_04330PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3712646365166	2	633.368267	1264.72198	1.6313	0.0010332	2.0474	0.0012967	3.6786	0.0023299	633.369142933459	79.157	1.5931	79.458	78.444	80.037	0.30047					112	50	3	0	0	0	1.0357	1	32742	32742		1.4819	0	1	3402400			8556	16637	4125	4147	10466	10466					0.10020911993365189
GVFHGIENF	9	Unmodified	_GVFHGIENF_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2541686892509	2	510.250892	1018.48723	2.1902	0.0011176	1.2239	0.00062448	3.4141	0.001742	510.2515904887428	47.048	0.28649	47.048	46.863	47.149	0					14	8	2	0	0	0	0.1735	1	19636	19636		36.044	19.102	1	880000			8557	3217	4126	4148	10467	10467					-0.021273857623327785
GVFHGIENF	9	Unmodified	_GVFHGIENF_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	510.250892	1018.48723	1.9155	0.00097739	-0.40666	-0.0002075	1.5088	0.00076989	510.2512060351656	46.545	0.17252	46.876	46.819	46.991	0.33034	-0.086203	-0.0013263	NaN	36.044	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	276560			8558	3217	4126	4148							-0.021273857623327785
GVFIVILHWK	10	Unmodified	_GVFIVILHWK_					0	0	0		tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3727294802666	2	606.368601	1210.72265	2.4428	0.0014813	2.3925	0.0014507	4.8353	0.002932	606.3711773272923	77.57	0.95656	78.851	78.507	79.464	1.2809					48	30	3	0	0	0	0.89803	1	32601	32601		1.6526	0.17072	1	1477500			8559	16462	4127	4149	10468	10468					0.1257175143305176
GVFIVILHWK	10	Unmodified	_GVFIVILHWK_					0	0	0		tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	tr|A0A553SPD7|A0A553SPD7_NIACIDUF3397domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26020PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3717529177666	2	606.368601	1210.72265	2.699	0.0016366	1.8286	0.0011088	4.5276	0.0027454	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	0.89803	1	31638	31638		1.6526	0.17072	1	6855700			8560	16462	4127	4149	10469	10469					0.1257175143305176
GVFIYPVVI	9	Unmodified	_GVFIYPVVI_					0	0	0		tr|A0A7D6VTH6|A0A7D6VTH6_9CLOTM48familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09035PE=3SV=1	tr|A0A7D6VTH6|A0A7D6VTH6_9CLOTM48familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09035PE=3SV=1	tr|A0A7D6VTH6|A0A7D6VTH6_9CLOTM48familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09035PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	503.2018615603447	2	503.802229	1005.5899	1.6337	0.00082308	-0.035609	-1.794E-05	1.5981	0.00080514	504.3043055286883	42.603	0.21639	44.524	44.416	44.632	1.9211					9	6	2	0	0	0	0.116	1	17834	17834		9.3474	0	1	337170			8561	16918	4128	4150	10470	10470					0.08733306976421318
GVFKVKWV	8	Unmodified	_GVFKVKWV_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7966796755791	2	481.794738	961.574923	1.8931	0.00091208	2.6036	0.0012544	4.4967	0.0021665	481.79602051550836	66.878	0.18953	66.878	66.735	66.924	0					6	5	2	0	0	0	0.89176	1	27865	27865		0.79363	0	1	369870	+		8562	9737	4129	4151	10471	10471					0.09259859899077583
GVFLVIMLL	9	Unmodified	_GVFLVIMLL_					0	0	0		tr|A0A553SM39|A0A553SM39_NIACICopperresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_21855PE=4SV=1	tr|A0A553SM39|A0A553SM39_NIACICopperresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_21855PE=4SV=1	tr|A0A553SM39|A0A553SM39_NIACICopperresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_21855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1004.626208484173	1	1004.62129	1003.61401	2.2915	0.0023021	-1.6367	-0.0016443	0.65484	0.00065787	1004.6205027165731	81.384	0.29814	81.675	81.493	81.791	0.29056					17	9	2	0	0	0	0.84963	2	33999	33999;34050		0.6015	0	1	1282400			8563	16366	4130	4152	10472;10473	10472					0.11234824138421118
GVFPGNYVTPV	11	Unmodified	_GVFPGNYVTPV_					0	0	0		ENSG00000172985|ENST00000309415|SH3RF3	ENSG00000172985|ENST00000309415|SH3RF3	ENSG00000172985|ENST00000309415|SH3RF3	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.3027831912041	2	575.300581	1148.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.662	1	38.97	38.47	39.47	0.30857								0	0	0	0.63775	1	16265	16265		1.3295	0.5359	1				8564	4263	4131	4153	10474	10474					0.018260121317553057
GVFRHHQYL	9	Unmodified	_GVFRHHQYL_					0	0	0		ENST00000420915.1_1_X:26576018-26576444:+|nuORF	ENST00000420915.1_1_X:26576018-26576444:+|nuORF	ENST00000420915.1_1_X:26576018-26576444:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.8055297732353	2	578.804157	1155.59376	1.9714	0.0011411	-1.7924	-0.0010374	0.17904	0.00010363	578.803940576307	59.372	0.22311	59.372	59.226	59.449	0					11	6	2	0	0	0	0.82604	1	24753	24753		2.3027	0	1	471490			8565	6445	4132	4154	10475	10475					0.022187895228626076
GVFRKNREK	9	Unmodified	_GVFRKNREK_					0	0	0			REV__ENST00000470112.1_1_3:71345519-71349010:-|nuORF	REV__ENST00000470112.1_1_3:71345519-71349010:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3322021365166	2	567.330539	1132.64652	1.4037	0.00079635	-0.30304	-0.00017192	1.1006	0.00062443	567.3302083958685	72.689	1.6753	72.689	71.636	73.312	0					116	52	3	0	0	0	0.83213	1	29981	29981		2.0598	0.40713	1	2431800	+		8566	13276	4133	4155	10476	10476					0.08550747585650242
GVFSLTRLL	9	Unmodified	_GVFSLTRLL_					0	0	0			REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	REV__nc|ENSG00000180264|Q7Z7M1|ADGRD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3090087771416	2	503.30821	1004.60187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.81	1	63.81	63.31	64.31	0								0	0	0	0.42693	1	26603	26603		2.3027	0.4585	1		+		8567	11293	4134	4156	10477	10477					0.09974923719596518
GVFVTLPFQ	9	Unmodified	_GVFVTLPFQ_					0	0	0		FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant;ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2802917361259	2	504.28166	1006.54877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.321	1	31.612	31.112	32.112	0.29086								0	0	0	0.42693	1	13147	13147		1.8442	0.19162	1				8568	5461	4135	4157	10478	10478					0.045755459369502205
GVFVWFVV	8	Unmodified	_GVFVWFVV_					0	0	0		ENST00000341617.7_1_7:126079175-126341814:-|nuORF;nc|ENSG00000179603|O00222-2|GRM8;ENSG00000179603|ENST00000339582|GRM8	ENST00000341617.7_1_7:126079175-126341814:-|nuORF	ENST00000341617.7_1_7:126079175-126341814:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1996642947197	2	476.768189	951.521825	2.7441	0.0013083	0.20421	9.7361E-05	2.9483	0.0014057	476.7688132920047	77.524	0.37527	77.841	77.701	78.076	0.31653					15	11	2	0	0	0	2.3239	1	32409	32409		0	0	1	1369500			8569	4520	4136	4158	10479	10479					0.044124821164245986
GVGAAEKVFEF	11	Unmodified	_GVGAAEKVFEF_					0	0	0		nc|ENSG00000150967|Q9NP78-3|ABCB9;ENST00000538895.5_1_12:123424612-123444782:-|nuORF;nc|ENSG00000150967|Q9NP78-6|ABCB9;nc|ENSG00000150967|Q9NP78-5|ABCB9;nc|ENSG00000150967|Q9NP78-2|ABCB9;ENSG00000150967|ENST00000280560|ABCB9	nc|ENSG00000150967|Q9NP78-3|ABCB9	nc|ENSG00000150967|Q9NP78-3|ABCB9	MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3041869997978	2	577.298039	1152.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.96	1	101.14	100.64	101.64	0.18047								0	0	0	0.63775	1	42481	42481		1.4819	0	1				8570	3275	4137	4159	10480	10480					0.011337082691397882
GVGARREPRR	10	Unmodified	_GVGARREPRR_					0	0	0			REV__ENST00000401827.7_1_8:66753887-66754151:-|nuORF	REV__ENST00000401827.7_1_8:66753887-66754151:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3382446169853	2	577.336687	1152.65882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.101	1	93.269	92.769	93.769	0.16835								0	0	0	0.66155	1	38981	38981		1.8442	0.36234	1		+		8571	12886	4138	4160	10481	10481					0.08859784048695474
GVGASHLA	8	Unmodified	_GVGASHLA_					0	0	0		tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	711.3752929568291	1	711.378414	710.371138	2.3397	0.0016644	-3.4693	-0.002468	-1.1296	-0.00080361	711.3755318475291	83.662	0.36525	83.932	83.77	84.135	0.27029					18	11	2	0	0	0	0.88504	2	34952	34952;35001		5.7604	0	1	914730			8572	16078	4139	4161	10482;10483	10482					0.004367154576129906
GVGASHLA	8	Unmodified	_GVGASHLA_					0	0	0		tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	711.378414	710.371138	2.5114	0.0017866	-6.1276	-0.004359	-3.6162	-0.0025725	711.3745368136255	83.874	0.24484	83.874	83.721	83.966	0	-0.19025	-0.0010076	NaN	5.7604	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	894610			8573	16078	4139	4161							0.004367154576129906
GVGASHLA	8	Unmodified	_GVGASHLA_					0	0	0		tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	711.378414	710.371138	2.3598	0.0016787	-6.0008	-0.0042688	-3.641	-0.0025901	711.3743050643035	82.914	0.3351	84.127	83.951	84.286	1.2125	0.06239	-0.00091738	NaN	5.7604	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1159400			8574	16078	4139	4161							0.004367154576129906
GVGDLPSNLAC	11	Unmodified	_GVGDLPSNLAC_					0	0	0		ENST00000337318.7_2_10:126309523-126309826:-|nuORF	ENST00000337318.7_2_10:126309523-126309826:-|nuORF	ENST00000337318.7_2_10:126309523-126309826:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.496508777142	1	1045.49827	1044.491	2.28	0.0023838	-0.44705	-0.00046739	1.833	0.0019164	1045.496805713262	69.559	0.98605	70.925	70.674	71.66	1.3657					54	31	2	0	0	0	0.1562	1	29323	29323		45.7	7.7256	1	2077000			8575	5919	4140	4162	10484	10484					-0.029470840508110996
GVGEILALLI	10	Unmodified	_GVGEILALLI_					0	0	0			REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3221008181572	2	499.318243	996.621933	4.5067	0.0022503	2.0098	0.0010035	6.5165	0.0032538	499.3195633101277	88.682	0.29037	90.129	89.953	90.243	1.4467					19	8	3	0	0	0	0.13671	1	37376	37376		57.471	21.344	1	2506700	+		8576	9702	4141	4163	10485	10485					0.12348674659574499
GVGEILALLI	10	Unmodified	_GVGEILALLI_					0	0	0			REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	499.318243	996.621933	5.5989	0.0027956	0.8608	0.00042981	6.4597	0.0032254	499.3190168823209	89.135	0.28963	90.155	89.945	90.235	1.0199	0.014823	-1.4425E-05	NaN	57.471	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1296400	+		8577	9702	4141	4163							0.12348674659574499
GVGEILALLI	10	Unmodified	_GVGEILALLI_					0	0	0			REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	REV__TIMM17B|p.G120R|1|0.36|ENSG00000126768|chrX:48893972-48893972|C/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.318243	996.621933	4.5067	0.0022503	2.0098	0.0010035	6.5165	0.0032538	499.3195633101277	88.682	0.29037	90.129	89.953	90.243	1.4467	-0.010701	0.001133	NaN	57.471	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2506700	+		8578	9702	4141	4163							0.12348674659574499
GVGHGGGG	8	Unmodified	_GVGHGGGG_					0	0	0			REV__ENST00000300087.6_1_16:23652841-23652898:+|nuORF	REV__ENST00000300087.6_1_16:23652841-23652898:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2736694216728	1	597.273949	596.266673	1.8364	0.0010968	-1.3299	-0.00079434	0.50646	0.00030249	597.2729837122845	49.045	0.39977	51.022	50.761	51.161	1.9772					14	12	2	0	0	0	0.88958	1	20556	20556		2.8892	2.0956	1	975660	+		8579	12311	4142	4164	10486	10486					-0.04760986299083925
GVGILGGK	8	Unmodified	_GVGILGGK_					0	0	0		ENST00000415531.5_1_1:35496252-35497220:-|nuORF	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.7214843630791	2	350.721239	699.427924	-1.2514	-0.0004389	1.4597	0.00051196	0.20832	7.3061E-05	350.7218195027566	13.941	0.18434	14.668	14.535	14.719	0.72639					9	5	2	0	0	0	0.76103	1	5787	5787		24.674	10.092	1	798440			8580	6400	4143	4165	10487	10487					0.06618763014148499
GVGILGGK	8	Unmodified	_GVGILGGK_					0	0	0		ENST00000415531.5_1_1:35496252-35497220:-|nuORF	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	ENST00000415531.5_1_1:35496252-35497220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.7213317751884	2	350.721239	699.427924	-0.28047	-9.8367E-05	0.22223	7.794E-05	-0.058243	-2.0427E-05	350.72144927358727	13.797	0.18782	14.625	14.485	14.673	0.82788					10	5	3	0	0	0	0.76103	1	5714	5714		24.674	10.092	1	894100			8581	6400	4143	4165	10488	10488					0.06618763014148499
GVGIQTRR	8	Unmodified	_GVGIQTRR_					0	0	0		ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7657958865166	2	443.764501	885.514448	2.8795	0.0012778	-0.029201	-1.2958E-05	2.8503	0.0012648	443.7643183862017	73.86	0.81805	74.185	73.605	74.423	0.32494					59	25	3	0	0	0	0.89176	1	30903	30903		0.79363	0	1	5334600			8582	3067	4144	4166	10489	10489					0.0671114256869032
GVGIQTRR	8	Unmodified	_GVGIQTRR_					0	0	0		ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.7661620974541	2	443.764501	885.514448	2.8122	0.001248	-0.17217	-7.6403E-05	2.64	0.0011716	443.7640263451187	72.527	1.1566	74.337	73.801	74.957	1.8101					64	36	3	0	0	0	0.89176	1	30414	30414		0.79363	0	1	3543300			8583	3067	4144	4166	10490	10490					0.0671114256869032
GVGIQTRR	8	Unmodified	_GVGIQTRR_					0	0	0		ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.7655212283134	2	443.764501	885.514448	2.8877	0.0012815	-0.37127	-0.00016475	2.5164	0.0011167	443.76426510790776	73.542	0.68103	75.338	75.006	75.687	1.7962					47	21	3	0	0	0	0.89176	1	30860	30860		0.79363	0	1	7102400			8584	3067	4144	4166	10491	10491					0.0671114256869032
GVGIQTRR	8	Unmodified	_GVGIQTRR_					0	0	0		ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	ENSG00000144229|ENST00000409968|THSD7B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	443.764501	885.514448	1.5127	0.00067128	0.49139	0.00021806	2.0041	0.00088934	443.764529440748	74.095	0.78384	74.095	73.55	74.334	0	-0.13303	0.00037475	NaN	0.79363	56	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5351700			8585	3067	4144	4166							0.0671114256869032
GVGIRIEKF	9	Unmodified	_GVGIRIEKF_					0	0	0			REV__tr|A0A553ST78|A0A553ST78_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04375PE=3SV=1	REV__tr|A0A553ST78|A0A553ST78_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04375PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8058044314384	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	0.82604	1	28942	28942		2.3027	0.24298	1	1556700	+		8586	15232	4145	4167	10492	10492					0.08902039576832976
GVGIYFSKFK	10	Unmodified	_GVGIYFSKFK_					0	0	0			REV__tr|A0A553SKX1|A0A553SKX1_NIACIMembraneproteinYqhROS=NialliacirculansOX=1397GN=CEQ21_19420PE=4SV=1	REV__tr|A0A553SKX1|A0A553SKX1_NIACIMembraneproteinYqhROS=NialliacirculansOX=1397GN=CEQ21_19420PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3231078982353	2	573.321317	1144.62808	2.5769	0.0014774	-0.90984	-0.00052163	1.6671	0.00095576	573.3211411284734	94.559	0.47587	94.703	94.448	94.924	0.14493					29	14	3	0	0	0	0.89646	1	39550	39550		1.8442	0.36234	1	916150	+		8587	14971	4146	4168	10493	10493					0.061551928911057985
GVGLGAGPP	9	Unmodified	_GVGLGAGPP_					0	0	0			REV__nc|ENSG00000128604|Q13568-5|IRF5	REV__nc|ENSG00000128604|Q13568-5|IRF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.3997680544853	1	724.398815	723.391539	2.3019	0.0016675	-3.5045	-0.0025386	-1.2025	-0.00087112	724.3963607123143	62.059	0.47706	63.477	63.238	63.715	1.4177					33	14	3	0	0	0	0.82604	1	26100	26100		2.3027	0	1	5991000	+		8588	9734	4147	4169	10494	10494					0.018778861174268968
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3481933474541	2	575.344269	1148.67399	3.8803	0.0022325	1.6788	0.00096592	5.5591	0.0031984	575.345338403377	82.165	0.50443	83.377	83.162	83.666	1.2125					24	15	2	0	0	0	0.846	1	34496	34496		7.2892	3.3448	1	1095000	+		8589	13050	4148	4170	10495	10495					0.105595148016846
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3484374880791	2	575.344269	1148.67399	3.9366	0.0022649	1.0328	0.00059422	4.9694	0.0028591	575.3447099359759	81.796	0.37749	83.466	83.357	83.734	1.67					18	11	2	0	0	0	0.87343	1	34302	34302		4.3292	2.0265	1	821280	+		8590	13050	4148	4170	10496	10496					0.105595148016846
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	575.344269	1148.67399	2.096	0.0012059	0.64779	0.0003727	2.7438	0.0015786	575.3446165773247	83.123	0.55095	83.123	82.922	83.473	0	-0.17015	-0.00048198	NaN	7.2892	31	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1539800	+		8591	13050	4148	4170							0.105595148016846
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	575.344269	1148.67399	2.1732	0.0012503	1.1125	0.00064006	3.2857	0.0018904	575.3449557963314	82.936	0.58424	83.206	83.001	83.585	0.27029	-0.086975	5.2727E-05	NaN	7.2892	37	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1159400	+		8592	13050	4148	4170							0.105595148016846
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	575.344269	1148.67399	3.8803	0.0022325	1.6788	0.00096592	5.5591	0.0031984	575.345338403377	82.165	0.50443	83.377	83.162	83.666	1.2125	0.083897	0.00070445	NaN	7.2892	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1095000	+		8593	13050	4148	4170							0.105595148016846
GVGLKIMRYI	10	Unmodified	_GVGLKIMRYI_					0	0	0			REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	REV__ENST00000436135.1_1_1:158495283-158495625:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	575.344269	1148.67399	3.9366	0.0022649	1.0328	0.00059422	4.9694	0.0028591	575.3447099359759	81.796	0.37749	83.466	83.357	83.734	1.67	0.17323	-3.8949E-05	NaN	7.2892	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	821280	+		8594	13050	4148	4170							0.105595148016846
GVGLLIGFTKT	11	Unmodified	_GVGLLIGFTKT_					0	0	0			REV__tr|A0A553SJQ1|A0A553SJQ1_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_17330PE=3SV=1	REV__tr|A0A553SJQ1|A0A553SJQ1_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_17330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3330566287041	2	553.334424	1104.6543	1.4676	0.0008121	-1.3768	-0.00076184	0.09083	5.0259E-05	553.3342039631581	79.586	0.4004	81.303	81.106	81.506	1.7167					26	12	3	0	0	0	1.0131	1	33366	33366		2.9952	0.69251	1	1156200	+		8595	14917	4149	4171	10497	10497					0.10615462062582992
GVGNDDRWLNR	11	Unmodified	_GVGNDDRWLNR_					0	0	0			REV__SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	REV__SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3246337771416	2	651.320899	1300.62725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.405	1	91.405	90.905	91.905	0								0	0	0	0.63775	1	38202	38202		5.2969	0.39987	1		+		8596	10407	4150	4172	10498	10498					-0.011042534959187833
GVGQGCWP	8	Unmodified	_GVGQGCWP_					0	0	0		ENST00000402119.8_1_19:16045502-16045571:-|nuORF	ENST00000402119.8_1_19:16045502-16045571:-|nuORF	ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797668337822	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.944	1	34.222	33.722	34.722	1.2782								0	0	0	1.0178	1	13815	13815		2.8892	0.31174	1				8597	6348	4151	4173	10499	10499					-0.0658693079412842
GVGRILICL	9	Unmodified	_GVGRILICL_					0	0	0			REV__nc|ENSG00000147364|Q8TCJ0-3|FBXO25	REV__nc|ENSG00000147364|Q8TCJ0-3|FBXO25	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2908203005791	2	472.291505	942.568457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.195	1	58.61	58.11	59.11	1.4145								0	0	0	0.42693	1	23976	23976		5.2307	0	1		+		8598	10325	4152	4174	10500	10500					0.09487598676037123
GVGRPSFG	8	Unmodified	_GVGRPSFG_					0	0	0		ENSG00000167548|ENST00000301067|KMT2D;nc|ENSG00000167548|O14686-3|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	ENSG00000167548|ENST00000301067|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	776.4049560427666	1	776.404963	775.397687	1.3168	0.0010224	-2.3899	-0.0018555	-1.0731	-0.00083315	776.4031682939063	100.18	0.12878	100.18	100.1	100.23	0					8	3	3	0	0	0	0.88163	1	41942	41942		7.9102	2.6795	1	2726400			8599	3974	4153	4175	10501	10501					0.0010040434896154693
GVGSLASS	8	Unmodified	_GVGSLASS_					0	0	0			REV__ENST00000462201.1_1_7:50348444-50444544:+|nuORF	REV__ENST00000462201.1_1_7:50348444-50444544:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1773559451103	2	339.176861	676.339169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.012	1	20.012	19.512	20.512	0								0	0	0	1.0178	1	8317	8317		2.5775	0	1		+		8600	11474	4154	4176	10502	10502					-0.011946970161829995
GVGSLASS	8	Unmodified	_GVGSLASS_					0	0	0			REV__ENST00000462201.1_1_7:50348444-50444544:+|nuORF	REV__ENST00000462201.1_1_7:50348444-50444544:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1765930056572	2	339.176861	676.339169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.58	1	20.58	20.08	21.08	0								0	0	0	1.0178	1	8555	8555		2.5775	0	1		+		8601	11474	4154	4176	10503	10503					-0.011946970161829995
GVGTKARA	8	Unmodified	_GVGTKARA_					0	0	0		nc|ENSG00000144451|Q8N0X2-3|SPAG16	nc|ENSG00000144451|Q8N0X2-3|SPAG16	nc|ENSG00000144451|Q8N0X2-3|SPAG16	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2293884158134	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.495	1	77.495	76.995	77.995	0								0	0	0	1.0178	1	32261	32261		2.5775	0.27475	1				8602	7887	4155	4177	10504	10504					0.05100379757311657
GVGVISVKT	9	Unmodified	_GVGVISVKT_					0	0	0			REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	430.8888122439384	2	430.26601	858.517468	0.89987	0.00038719	-1.9532	-0.00084038	-1.0533	-0.0004532	430.26510895390845	70.127	0.30943	70.127	70.024	70.333	0					16	9	2	0	0	0	0.11898	1	29175	29175		0.6015	0.6015	1	643030	+		8603	15460	4156	4178	10505	10505					0.08254972902852842
GVGVISVKT	9	Unmodified	_GVGVISVKT_					0	0	0			REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	430.26601	858.517468	1.6315	0.000702	-1.0217	-0.00043962	0.6098	0.00026238	430.2650579122892	69.961	0.34401	70.283	70.098	70.442	0.32224	-0.033577	0.00035188	NaN	0.6015	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1425800	+		8604	15460	4156	4178							0.08254972902852842
GVGVISVKT	9	Unmodified	_GVGVISVKT_					0	0	0			REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	430.26601	858.517468	2.0591	0.00088595	-0.52855	-0.00022742	1.5305	0.00065853	430.2654553263664	69.03	0.31052	70.396	70.22	70.53	1.3657	0.079128	0.00077629	NaN	0.6015	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	817260	+		8605	15460	4156	4178							0.08254972902852842
GVGVISVKT	9	Unmodified	_GVGVISVKT_					0	0	0			REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	REV__tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	430.26601	858.517468	1.69	0.00072713	-1.7157	-0.0007382	-0.025733	-1.1072E-05	430.2649902910847	68.608	0.36581	70.461	70.313	70.679	1.853	0.14444	-0.00024528	NaN	0.6015	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568360	+		8606	15460	4156	4178							0.08254972902852842
GVGVRVLQF	9	Unmodified	_GVGVRVLQF_					0	0	0			REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	487.2940246462822	2	487.792727	973.5709	2.4299	0.0011853	-3.3071	-0.0016132	-0.87724	-0.00042791	487.7897088937021	78.648	0.34035	78.958	78.738	79.078	0.30933					23	10	3	0	0	0	0.11908	1	32820	32820		0.52476	0.52476	1	1130700	+		8607	14522	4157	4179	10506	10506					0.08305770405388557
GVGVRVLQF	9	Unmodified	_GVGVRVLQF_					0	0	0			REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	487.792727	973.5709	1.7016	0.00083005	-4.2598	-0.0020779	-2.5582	-0.0012479	487.79023097524765	78.822	0.37022	78.822	78.597	78.968	0	-0.19321	0.0012587	NaN	0.52476	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1350200	+		8608	14522	4157	4179							0.08305770405388557
GVGVRVLQF	9	Unmodified	_GVGVRVLQF_					0	0	0			REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	487.792727	973.5709	2.5253	0.0012318	-7.1774	-0.0035011	-4.6522	-0.0022693	487.788880200984	77.801	0.37261	79.082	78.856	79.229	1.2809	0.067055	-0.0015877	NaN	0.52476	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1077300	+		8609	14522	4157	4179							0.08305770405388557
GVGVRVLQF	9	Unmodified	_GVGVRVLQF_					0	0	0			REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	REV__nc|ENSG00000197558|A2VEC9-2|SSPOP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.792727	973.5709	1.1605	0.00056607	-6.5944	-0.0032167	-5.4339	-0.0026506	487.7892551191613	77.447	0.344	79.199	78.946	79.29	1.7514	0.18362	-0.0010189	NaN	0.52476	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	661710	+		8610	14522	4157	4179							0.08305770405388557
GVGYCATC	8	Unmodified	_GVGYCATC_					0	0	0		tr|A0A7D7ACX6|A0A7D7ACX6_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21015PE=4SV=1	tr|A0A7D7ACX6|A0A7D7ACX6_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21015PE=4SV=1	tr|A0A7D7ACX6|A0A7D7ACX6_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21015PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	387.1516906619072	2	387.151474	772.288396	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.06	1	67.453	66.953	67.953	1.3936								0	0	0	1.0178	1	27709	27709		0.79363	0	1				8611	17321	4158	4180	10507	10507					-0.10685685657074373
GVHACAMH	8	Unmodified	_GVHACAMH_					0	0	0		tr|A0A553SFD6|A0A553SFD6_NIACINucleosidehydrolaseOS=NialliacirculansOX=1397GN=CEQ21_08730PE=4SV=1	tr|A0A553SFD6|A0A553SFD6_NIACINucleosidehydrolaseOS=NialliacirculansOX=1397GN=CEQ21_08730PE=4SV=1	tr|A0A553SFD6|A0A553SFD6_NIACINucleosidehydrolaseOS=NialliacirculansOX=1397GN=CEQ21_08730PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.1789428591728	2	413.178358	824.342163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.872	1	30.671	30.171	31.171	1.7987								0	0	0	1.0178	1	12095	12095		0.79363	0	1				8612	16050	4159	4181	10508	10508					-0.07703468434681326
GVHDNFFCLSS	11	Unmodified	_GVHDNFFCLSS_					0	0	0			REV__ENSG00000129317|ENST00000344862|PUS7L	REV__ENSG00000129317|ENST00000344862|PUS7L	MSMS	GG20161007_CRH_Patient100_A02_02	2	409.1836120486259	3	409.181729	1224.52336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.88	1	28.151	27.651	28.651	0.27119								0	0	0	0.63775	1	11660	11660		0.40827	0.24894	1		+		8613	9753	4160	4182	10509	10509					-0.07992296647785224
GVHEEIER	8	Unmodified	_GVHEEIER_					0	0	0			REV__TCEANC|p.F210Gfs*24|1|0.05|ENSG00000176896|chrX:13663135-13663136|-/GGGGA|frameshift_variant	REV__TCEANC|p.F210Gfs*24|1|0.05|ENSG00000176896|chrX:13663135-13663136|-/GGGGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7440978884697	2	484.743431	967.472308	1.1666	0.0005655	-1.1515	-0.0005582	0.015073	7.3066E-06	484.7430231169829	26.191	0.29952	26.191	26.057	26.357	0					24	9	3	0	0	0	0.89008	1	10918	10918		2.5775	0	1	2986900	+		8614	14675	4161	4183	10510	10510					-0.012728776303333689
GVHEEIER	8	Unmodified	_GVHEEIER_					0	0	0			REV__TCEANC|p.F210Gfs*24|1|0.05|ENSG00000176896|chrX:13663135-13663136|-/GGGGA|frameshift_variant	REV__TCEANC|p.F210Gfs*24|1|0.05|ENSG00000176896|chrX:13663135-13663136|-/GGGGA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	484.7884399294853	2	484.743431	967.472308	1.702	0.00082501	-2.8131	-0.0013637	-1.1112	-0.00053864	484.74235966237563	26.609	0.30468	26.87	26.712	27.017	0.26173					21	9	3	0	0	0	2.3239	1	11106	11106		2.5775	0.27475	1	1744200	+		8615	14675	4161	4183	10511	10511					-0.012728776303333689
GVHKRYFRKIK	11	Unmodified	_GVHKRYFRKIK_					0	0	0		ENST00000491950.5_1_X:123480470-123505238:+|nuORF;nc|ENSG00000183918|O60880-4|SH2D1A;ENSG00000183918|ENST00000371139|SH2D1A	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	ENST00000491950.5_1_X:123480470-123505238:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	716.4403564333916	2	716.438412	1430.86227	2.656	0.0019029	-3.7923	-0.002717	-1.1363	-0.00081408	716.4357562161748	85.18	0.8282	85.18	84.558	85.386	0					40	25	2	0	0	0	1.0393	2	35437	35437;35502		0.35063	0	1	1281000			8616	4676	4162	4184	10512;10513	10512					0.16407508770271306
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3944579958916	2	677.395402	1352.77625	2.3374	0.0015833	-2.2973	-0.0015562	0.040108	2.7169E-05	677.393399060344	82.17	0.63833	82.17	81.854	82.493	0					36	20	2	0	0	0	1.0362	1	34150	34150		1.3295	0.80477	1	1352300	+		8617	12265	4163	4185	10514	10514					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3967773318291	2	677.395402	1352.77625	2.4756	0.001677	-0.72493	-0.00049107	1.7507	0.0011859	677.3949411725933	83.276	1.3837	83.276	82.493	83.876	0					99	44	3	0	0	0	1.0362	1	34691	34691		1.3295	0	1	1972200	+		8618	12265	4163	4185	10515	10515					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3976928591728	2	677.395402	1352.77625	2.5913	0.0017553	-0.022349	-1.5139E-05	2.5689	0.0017402	677.3950001596285	84.07	0.49205	84.07	83.876	84.368	0					30	15	3	0	0	0	1.0393	1	35047	35047		0.35063	0	1	749950	+		8619	12265	4163	4185	10516	10516					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3960449099541	2	677.395402	1352.77625	2.753	0.0018649	-0.36098	-0.00024453	2.3921	0.0016204	677.3951051592902	85.403	1.3251	85.403	84.589	85.914	0					130	41	4	0	0	0	1.0393	1	35757	35757		0.35063	0	1	4030800	+		8620	12265	4163	4185	10517	10517					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3988525271416	2	677.395402	1352.77625	2.2271	0.0015086	-0.4084	-0.00027665	1.8187	0.001232	677.3951106076005	83.067	1.4121	83.337	82.634	84.046	0.27029					101	45	3	0	0	0	1.0362	1	34725	34725		1.3295	0	1	1706000	+		8621	12265	4163	4185	10518	10518					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3992797732353	2	677.395402	1352.77625	2.5056	0.0016973	-1.7286	-0.001171	0.77698	0.00052632	677.3942794699842	85.883	0.75523	86.135	85.943	86.699	0.25227					42	24	2	0	0	0	1.0362	1	36096	36096		1.3295	0.92882	1	2135800	+		8622	12265	4163	4185	10519	10519					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3976318240166	2	677.395402	1352.77625	3.4726	0.0023523	-0.12739	-8.629E-05	3.3452	0.002266	677.3954511194552	82.437	1.1918	83.649	82.728	83.92	1.2125					59	37	2	0	0	0	1.0362	1	34536	34536		1.3295	0	1	2089600	+		8623	12265	4163	4185	10520	10520					0.11397361708145581
GVHRGFGRRRR	11	Unmodified	_GVHRGFGRRRR_					0	0	0			REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	REV__ENST00000283429.10_1_16:4524572-4524719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3937866091728	2	677.395402	1352.77625	1.5971	0.0010819	0.21006	0.00014229	1.8072	0.0012242	677.3953680562546	84.546	1.1548	85.705	85.086	86.241	1.159					67	37	3	0	0	0	1.0362	2	35262	35262;35420		1.3295	0	1	5749300	+		8624	12265	4163	4185	10521;10522	10521					0.11397361708145581
GVHRPLVF	8	Unmodified	_GVHRPLVF_					0	0	0			REV__ENSG00000078898|ENST00000170150|BPIFB2	REV__ENSG00000078898|ENST00000170150|BPIFB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1458007693291	2	462.774337	923.534121	2.046	0.00094686	0.68754	0.00031818	2.7336	0.001265	462.77418105728214	77.631	0.15465	77.631	77.533	77.688	0					6	4	2	0	0	0	2.3239	1	32312	32312		0.79363	0	1	416400	+		8625	8793	4164	4186	10523	10523					0.06929518579454452
GVHRRRPI	8	Unmodified	_GVHRRRPI_					0	0	0		nc|ENSG00000049323|Q14766-2|LTBP1;nc|ENSG00000049323|Q14766-5|LTBP1;ENSG00000049323|ENST00000404816|LTBP1;nc|ENSG00000049323|Q14766-4|LTBP1	nc|ENSG00000049323|Q14766-2|LTBP1	nc|ENSG00000049323|Q14766-2|LTBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.8067199587822	2	495.807034	989.599515	2.6984	0.0013379	-1.4223	-0.00070519	1.2761	0.00063271	495.80584315139487	72.196	0.49049	74.006	73.831	74.321	1.8101					26	15	2	0	0	0	0.88409	1	30295	30295		6.3541	0.59368	1	1491000			8626	690	4165	4187	10524	10524					0.10429932825161359
GVHRRRPI	8	Unmodified	_GVHRRRPI_					0	0	0		nc|ENSG00000049323|Q14766-2|LTBP1;nc|ENSG00000049323|Q14766-5|LTBP1;ENSG00000049323|ENST00000404816|LTBP1;nc|ENSG00000049323|Q14766-4|LTBP1	nc|ENSG00000049323|Q14766-2|LTBP1	nc|ENSG00000049323|Q14766-2|LTBP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	495.807034	989.599515	1.4842	0.00073587	-0.51159	-0.00025365	0.9726	0.00048222	495.80631335741487	74.089	0.22349	74.089	74.014	74.238	0	0.041285	0.00068943	NaN	6.3541	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260330			8627	690	4165	4187							0.10429932825161359
GVHSRLGKPR	10	Unmodified	_GVHSRLGKPR_					0	0	0		ENST00000270586.7_1_17:4699536-4700048:+|nuORF	ENST00000270586.7_1_17:4699536-4700048:+|nuORF	ENST00000270586.7_1_17:4699536-4700048:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8314697146416	2	553.830706	1105.64686	1.2808	0.00070934	-1.0285	-0.00056959	0.25232	0.00013974	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.89803	1	29677	29677		1.4819	0.15237	1	2160700			8628	5676	4166	4188	10525	10525					0.09826167305504896
GVHTRHWLR	9	Unmodified	_GVHTRHWLR_					0	0	0			REV__ENST00000301215.7_1_19:42729646-42729958:+|nuORF	REV__ENST00000301215.7_1_19:42729646-42729958:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1270934939384	3	387.884458	1160.63154	-0.0088989	-3.4517E-06	-1.8961	-0.00073545	-1.905	-0.0007389	387.8837588279959	14.875	0.27861	15.772	15.651	15.93	0.89664					21	8	4	0	0	0	0.11941	1	6123	6123		1.0715	0.3738	1	5670700	+		8629	12314	4167	4189	10526	10526					0.05765300508301152
GVHYPPFRR	9	Unmodified	_GVHYPPFRR_					0	0	0			REV__ENST00000540447.5_1_12:10856597-10862620:-|nuORF	REV__ENST00000540447.5_1_12:10856597-10862620:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.8080932497978	2	564.8067	1127.59885	2.5939	0.0014651	-0.27353	-0.00015449	2.3204	0.0013106	564.8071693751708	94.526	0.47587	94.671	94.448	94.924	0.14493					21	14	2	0	0	0	0.84963	1	39551	39551		0.6015	0	1	508650	+		8630	8648	4168	4190	10527	10527					0.04015093385464752
GVIAEILRGV	10	Unmodified	_GVIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.8201782107353	2	513.818941	1025.62333	1.935	0.00099425	1.5521	0.00079751	3.4871	0.0017918	513.8194635585373	72.316	0.28642	72.316	72.173	72.46	0					15	8	2	0	0	0	0.21129	1	30108	30108		47.594	18.513	1	1107300			8631	1340	4169	4191	10528	10528					0.11154308748336916
GVIAEILRGV	10	Unmodified	_GVIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.8203613162041	2	513.818941	1025.62333	1.8502	0.00095067	0.73241	0.00037633	2.5826	0.001327	513.8193731995817	71.675	0.38066	71.998	71.751	72.132	0.32359					19	11	2	0	0	0	0.37288	2	30001	29949;30001		34.932	12.196	1	875740			8632	1340	4169	4191	10529;10530	10530					0.11154308748336916
GVIAEILRGV	10	Unmodified	_GVIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.8196899294853	2	513.818941	1025.62333	3.2495	0.0016696	-0.43568	-0.00022386	2.8138	0.0014458	513.8184254333484	70.426	0.32193	71.779	71.648	71.97	1.3536					14	9	2	0	0	0	0.21129	1	29554	29554		47.594	22.195	1	2271500			8633	1340	4169	4191	10531	10531					0.11154308748336916
GVIAEILRGV	10	Unmodified	_GVIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.8203002810478	2	513.818941	1025.62333	3.1348	0.0016107	-0.85331	-0.00043845	2.2815	0.0011723	513.8180804767011	69.865	0.38142	71.703	71.5	71.881	1.8378					23	11	3	0	0	0	0.11344	1	29305	29305		61.602	13.853	1	2519200			8634	1340	4169	4191	10532	10532					0.11154308748336916
GVIETMKQTF	10	Unmodified	_GVIETMKQTF_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3005248904228	2	577.299724	1152.5849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.96	1	101.16	100.66	101.66	0.20527								0	0	0	0.66176	1	42449	42449		1.4819	0.41044	1		+		8635	11133	4170	4192	10533	10533					0.014706350514870792
GVIETMKQTF	10	Unmodified	_GVIETMKQTF_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3006469607353	2	577.299724	1152.5849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.08	1	101.29	100.79	101.79	0.20527								0	0	0	0.66176	1	42502	42502		1.4819	0.41044	1		+		8636	11133	4170	4192	10534	10534					0.014706350514870792
GVIFLPMII	9	Unmodified	_GVIFLPMII_					0	0	0		tr|A0A7D6ZJJ7|A0A7D6ZJJ7_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11300PE=3SV=1	tr|A0A7D6ZJJ7|A0A7D6ZJJ7_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11300PE=3SV=1	tr|A0A7D6ZJJ7|A0A7D6ZJJ7_9CLOTFtsX-likepermeasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11300PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.8100768923759	2	501.806457	1001.59836	1.7263	0.00086625	0.48329	0.00024252	2.2096	0.0011088	501.8063087978377	78.581	1.2359	78.581	78.001	79.237	0					73	39	3	0	0	0	0.64949	1	32965	32965		9.3474	0	1	2518700			8637	17109	4171	4193	10535	10535					0.09762537621384126
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.3022033572197	2	429.300188	856.585822	3.1083	0.0013344	1.0566	0.00045361	4.1649	0.001788	429.3005705149137	106.22	0.16132	106.28	106.19	106.35	0.05455					18	7	4	0	0	0	0.89176	1	45194	45194		0.79363	0.10326	1	54651000			8638	3283	4172	4194	10536	10536					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.3016540408134	2	429.300188	856.585822	3.2193	0.001382	-0.31074	-0.0001334	2.9086	0.0012486	429.299978850207	106.18	0.16426	106.34	106.26	106.43	0.15781					28	8	5	0	0	0	0.89176	1	45397	45397		0.79363	0.79363	1	313130000			8639	3283	4172	4194	10537	10537					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.3020812869072	2	429.300188	856.585822	3.2184	0.0013817	-0.70958	-0.00030462	2.5088	0.001077	429.2996077631802	107.81	0.16229	107.96	107.86	108.03	0.15781					19	8	3	0	0	0	0.89176	1	46436	46436		0.79363	0.79363	1	165650000			8640	3283	4172	4194	10538	10538					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.3018066287041	2	429.300188	856.585822	3.2168	0.001381	1.6855	0.00072357	4.9022	0.0021045	429.3008215615932	108.35	0.36236	108.51	108.42	108.78	0.15781					26	18	2	0	0	0	0.89176	1	46846	46846		0.79363	0.79363	1	23759000			8641	3283	4172	4194	10539	10539					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.3010742068291	2	429.300188	856.585822	3.2847	0.0014101	-0.51	-0.00021894	2.7747	0.0011912	429.2998835512843	106.17	0.16205	106.33	106.24	106.4	0.16174					29	8	4	0	0	0	0.89176	1	45318	45318		0.79363	0.10326	1	219550000			8642	3283	4172	4194	10540	10540					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.3015624880791	2	429.300188	856.585822	3.2818	0.0014089	-1.4935	-0.00064117	1.7883	0.00076772	429.299398254954	107.77	0.18404	107.92	107.83	108.01	0.15795					21	9	3	0	0	0	0.89176	1	46376	46376		0.79363	0.79363	1	153610000			8643	3283	4172	4194	10541	10541					0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	429.300188	856.585822	0.52162	0.00022393	2.0882	0.00089646	2.6098	0.0011204	429.30088415315055	108.37	0.076752	108.37	108.34	108.42	0	-0.090285	0.00040143	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3409500			8644	3283	4172	4194							0.15179262273363747
GVIGKKKK	8	Unmodified	_GVIGKKKK_					0	0	0		nc|ENSG00000151327|Q8N128|FAM177A1;ENSG00000151327|ENST00000280987|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	429.300188	856.585822	3.2801	0.0014081	0.45108	0.00019365	3.7311	0.0016018	429.29995883294816	108.35	0.22137	108.51	108.42	108.64	0.15795	0.047933	-0.0010042	NaN	0.79363	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4706500			8645	3283	4172	4194							0.15179262273363747
GVIGVLVADT	10	Unmodified	_GVIGVLVADT_					0	0	0		nc|ENSG00000204653|A6ND91-2|ASPDH;ENSG00000204653|ENST00000389208|ASPDH	nc|ENSG00000204653|A6ND91-2|ASPDH	nc|ENSG00000204653|A6ND91-2|ASPDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2757446169853	2	472.276575	942.538597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.081	1	53.403	52.903	53.903	0.32283								0	0	0	0.66008	1	22237	22237		4.3292	0	1				8646	5158	4173	4195	10542	10542					0.06502938211690434
GVIGVQLNVKP	11	Unmodified	_GVIGVQLNVKP_					0	0	0		tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3446533083916	2	562.345323	1122.67609	1.3848	0.00077873	-1.9933	-0.0011209	-0.6085	-0.00034219	562.3440565614203	74.125	1.2926	74.125	73.734	75.027	0					60	40	2	0	0	0	1.0357	2	30875	30875;30950		1.4819	0	1	1676500			8647	16937	4174	4196	10543;10544	10543					0.11966266811100468
GVIGVQLNVKP	11	Unmodified	_GVIGVQLNVKP_					0	0	0		tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	tr|A0A7D6VTZ8|A0A7D6VTZ8_9CLOTArgininebiosynthesisbifunctionalproteinArgJOS=ClostridiumintestinaleOX=36845GN=argJPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3463012576103	2	562.345323	1122.67609	2.3852	0.0013413	-2.6967	-0.0015165	-0.31153	-0.00017519	562.3437694890226	73.779	1.3866	74.104	73.881	75.267	0.32494					94	43	3	0	0	0	1.0357	2	30817	30817;30973		1.4819	0	1	2032100			8648	16937	4174	4196	10545;10546	10545					0.11966266811100468
GVIKVWRKVV	10	Unmodified	_GVIKVWRKVV_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3895141482353	2	592.387326	1182.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.411	1	73.411	72.911	73.911	0								0	0	0	0.66237	1	30564	30564		0.45834	0.057624	1				8649	3464	4175	4197	10547	10547					0.1760284269867043
GVIKVWRKVV	10	Unmodified	_GVIKVWRKVV_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3887817263603	2	592.387326	1182.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.525	1	73.525	73.025	74.025	0								0	0	0	0.66237	1	30615	30615		0.45834	0.10771	1				8650	3464	4175	4197	10548	10548					0.1760284269867043
GVILPPWH	8	Unmodified	_GVILPPWH_					0	0	0		ENST00000603175.1_1_2:74730086-74730338:+|nuORF	ENST00000603175.1_1_2:74730086-74730338:+|nuORF	ENST00000603175.1_1_2:74730086-74730338:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.5242797732353	1	918.519599	917.512323	3.2363	0.0029726	1.7949	0.0016486	5.0311	0.0046212	918.5213239629236	103.41	0.068062	103.59	103.53	103.6	0.18066					6	2	3	0	0	0	0.88958	1	43542	43542		2.8892	2.0956	1	99921000			8651	7549	4176	4198	10549	10549					0.050267138308981885
GVINLARVDER	11	Unmodified	_GVINLARVDER_					0	0	0		tr|A0A7D6ZJ31|A0A7D6ZJ31_9CLOTPTSsugartransportersubunitIIBOS=ClostridiumintestinaleOX=36845GN=HZF06_06875PE=4SV=1	tr|A0A7D6ZJ31|A0A7D6ZJ31_9CLOTPTSsugartransportersubunitIIBOS=ClostridiumintestinaleOX=36845GN=HZF06_06875PE=4SV=1	tr|A0A7D6ZJ31|A0A7D6ZJ31_9CLOTPTSsugartransportersubunitIIBOS=ClostridiumintestinaleOX=36845GN=HZF06_06875PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	621.3553344607353	2	621.351668	1240.68878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.874	1	96.979	96.479	97.479	0.105								0	0	0	0.63775	1	40537	40537		1.3295	0	1				8652	17106	4177	4199	10550	10550					0.07806678203360207
GVIRAAEKN	9	Unmodified	_GVIRAAEKN_					0	0	0			REV__tr|A0A7D7ACZ4|A0A7D7ACZ4_9CLOTLargeribosomalsubunitproteinuL18OS=ClostridiumintestinaleOX=36845GN=rplRPE=3SV=1	REV__tr|A0A7D7ACZ4|A0A7D7ACZ4_9CLOTLargeribosomalsubunitproteinuL18OS=ClostridiumintestinaleOX=36845GN=rplRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2783080935478	2	479.277441	956.540328	2.7224	0.0013048	0.52914	0.0002536	3.2515	0.0015584	479.2777388362033	64.549	1.1454	64.878	64.658	65.803	0.32899					62	35	3	0	0	0	0.77526	1	27031	27031		4.3292	1.7518	1	1127300	+		8653	15904	4178	4200	10551	10551					0.06031992020314192
GVIRKQPLP	9	Unmodified	_GVIRKQPLP_					0	0	0		chr16:7423028-7518147|168|13.12|0.49|4.74|+|1|RBFOX1,RBFOX1|1	chr16:7423028-7518147|168|13.12|0.49|4.74|+|1|RBFOX1,RBFOX1|1	chr16:7423028-7518147|168|13.12|0.49|4.74|+|1|RBFOX1,RBFOX1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.3217956423759	2	504.321651	1006.62875	2.7117	0.0013676	-3.2587	-0.0016434	-0.54693	-0.00027583	504.32006229664813	73.442	0.69125	73.767	73.605	74.296	0.32494					45	21	3	0	0	0	0.82604	2	30696	30696;30806		2.3027	1.5091	1	1512500			8654	213	4179	4201	10552;10553	10552					0.12570032330802405
GVIRQLPPTV	10	Unmodified	_GVIRQLPPTV_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A;nc|ENSG00000110046|Q2TAZ0-4|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3320800662041	2	540.332216	1078.64988	2.2608	0.0012216	-2.7776	-0.0015008	-0.51685	-0.00027927	540.3307221851405	84.586	0.59726	84.586	84.151	84.749	0					25	18	2	0	0	0	0.89803	1	35290	35290		1.6526	0	1	1196200			8655	1690	4180	4202	10554	10554					0.1136999763964468
GVISVKKHSKI	11	Unmodified	_GVISVKKHSKI_					0	0	0			REV__tr|A0A7D6VX34|A0A7D6VX34_9CLOTDNA-protectingproteinDprAOS=ClostridiumintestinaleOX=36845GN=dprAPE=3SV=1	REV__tr|A0A7D6VX34|A0A7D6VX34_9CLOTDNA-protectingproteinDprAOS=ClostridiumintestinaleOX=36845GN=dprAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	400.0451537966728	3	399.255557	1194.74484	0.40191	0.00016046	1.4539	0.00058048	1.8558	0.00074094	399.25450149790606	23.233	0.58392	24.884	24.716	25.3	1.6511					35	18	3	0	0	0	0.14606	1	9810	9810		0.50596	0	1	3000900	+		8656	15547	4181	4203	10555	10555					0.15525931110846614
GVITEFQEKI	10	Unmodified	_GVITEFQEKI_					0	0	0		tr|A0A7D7AED1|A0A7D7AED1_9CLOTPhosphotriesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02025PE=3SV=1	tr|A0A7D7AED1|A0A7D7AED1_9CLOTPhosphotriesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02025PE=3SV=1	tr|A0A7D7AED1|A0A7D7AED1_9CLOTPhosphotriesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1540405154228	3	388.548406	1162.62339	-0.57394	-0.000223	2.1934	0.00085223	1.6194	0.00062923	388.5490659163497	30.298	0.30786	30.298	30.131	30.439	0					19	9	3	0	0	0	0.1256	1	12717	12717		0.69767	0.34703	1	1274800			8657	17333	4182	4204	10556	10556					0.04858263957657982
GVITGKPV	8	Unmodified	_GVITGKPV_					0	0	0		tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	386.1550170779228	2	385.742171	769.469789	1.5857	0.00061168	-4.1507	-0.0016011	-2.565	-0.00098943	385.7411387273553	65.228	0.37294	67.137	66.907	67.28	1.9085					18	11	2	0	0	0	2.3239	1	27381	27381		0.69038	0.088878	1	583920			8658	16761	4183	4205	10557	10557					0.0758331870266602
GVITGKPV	8	Unmodified	_GVITGKPV_					0	0	0		tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	tr|A0A7D6VPC6|A0A7D6VPC6_9CLOTFlavodoxinOS=ClostridiumintestinaleOX=36845GN=HZF06_22255PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	385.742171	769.469789	1.9504	0.00075236	-4.6101	-0.0017783	-2.6597	-0.001026	385.7405413458319	65.558	0.36684	66.957	66.757	67.124	1.3989	-0.089795	-0.00015839	NaN	0.69038	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892910			8659	16761	4183	4205							0.0758331870266602
GVITIHALSVP	11	Unmodified	_GVITIHALSVP_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|18|1|sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|18|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8315917849541	2	553.832049	1105.64954	1.3705	0.00075904	-2.489	-0.0013785	-1.1185	-0.00061944	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	1.0131	1	30779	30779		2.9952	1.6657	1	2354100	+		8660	14195	4184	4206	10558	10558					0.10094577919812764
GVITRVQFV	9	Unmodified	_GVITRVQFV_					0	0	0			REV__IL18RAP|p.V238F|1|0.46|ENSG00000115607|chr2:102437344-102437344|G/T|missense_variant	REV__IL18RAP|p.V238F|1|0.46|ENSG00000115607|chr2:102437344-102437344|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8058959841728	2	509.805834	1017.59712	2.1026	0.0010719	-2.4021	-0.0012246	-0.29949	-0.00015268	509.80429217284916	64.884	0.51175	65.21	65.131	65.643	0.32689					19	15	2	0	0	0	0.83213	1	27240	27240		2.0598	0.40713	1	704080	+		8661	14231	4185	4207	10559	10559					0.08902039576844345
GVITRVQFV	9	Unmodified	_GVITRVQFV_					0	0	0			REV__IL18RAP|p.V238F|1|0.46|ENSG00000115607|chr2:102437344-102437344|G/T|missense_variant	REV__IL18RAP|p.V238F|1|0.46|ENSG00000115607|chr2:102437344-102437344|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8049499392509	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	0.76456	1	29091	29091		4.756	0	1	1556700	+		8662	14231	4185	4207	10560	10560					0.08902039576844345
GVIVEAVSHVE	11	Unmodified	_GVIVEAVSHVE_					0	0	0			REV__tr|A0A7D7A1P9|A0A7D7A1P9_9CLOTDiacylglycerolkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16425PE=3SV=1	REV__tr|A0A7D7A1P9|A0A7D7A1P9_9CLOTDiacylglycerolkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16425PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8078491091728	2	569.808771	1137.60299	1.2854	0.00073241	-1.3569	-0.00077315	-0.071495	-4.0738E-05	569.8079435789375	26.073	0.37622	27.332	27.172	27.549	1.2594					30	11	4	0	0	0	1.0362	1	10960	10960		1.3295	0.5359	1	1204400	+		8663	15832	4186	4208	10561	10561					0.03969093297860127
GVIVGHLL	8	Unmodified	_GVIVGHLL_					0	0	0		tr|A0A7D6VYV8|A0A7D6VYV8_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17960PE=4SV=1	tr|A0A7D6VYV8|A0A7D6VYV8_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17960PE=4SV=1	tr|A0A7D6VYV8|A0A7D6VYV8_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	807.5127441287041	1	807.5087	806.501424	2.7637	0.0022317	3.6061	0.002912	6.3699	0.0051437	807.5114634764548	109.46	0.3873	109.62	109.39	109.78	0.15898					33	16	3	0	0	0	0.89176	2	47505	47505;47566		0.79363	0	1	77584000			8664	17003	4187	4209	10562;10563	10562					0.09043311456628089
GVIVKLGP	8	Unmodified	_GVIVKLGP_					0	0	0			REV__ENSG00000185313|ENST00000449082|SCN10A	REV__ENSG00000185313|ENST00000449082|SCN10A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	2	391.760364	781.506175	0.57137	0.00022384	2.4332	0.00095321	3.0045	0.0011771	391.7610843783418	19.459	0.21289	19.653	19.531	19.744	0.19342					11	6	2	0	0	0	2.3239	1	8042	8042		2.8892	0	1	738160	+		8665	11459	4188	4210	10564	10564					0.10668195599384944
GVIVKLGP	8	Unmodified	_GVIVKLGP_					0	0	0			REV__ENSG00000185313|ENST00000449082|SCN10A	REV__ENSG00000185313|ENST00000449082|SCN10A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	2	391.760364	781.506175	0.55564	0.00021768	3.79	0.0014848	4.3456	0.0017024	391.76170436379425	19.158	0.18789	19.351	19.231	19.419	0.19342					9	5	2	0	0	0	2.3239	1	7932	7932		2.8892	0	1	405510	+		8666	11459	4188	4210	10565	10565					0.10668195599384944
GVIVKLGP	8	Unmodified	_GVIVKLGP_					0	0	0			REV__ENSG00000185313|ENST00000449082|SCN10A	REV__ENSG00000185313|ENST00000449082|SCN10A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	391.760364	781.506175	-0.95008	-0.0003722	5.2562	0.0020592	4.3061	0.001687	391.7623587390801	19.869	0.21972	19.869	19.76	19.979	0	0.19407	0.00086	NaN	2.8892	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	831190	+		8667	11459	4188	4210							0.10668195599384944
GVKATKPQILL	11	Unmodified	_GVKATKPQILL_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3784057497978	2	584.376623	1166.73869	2.6101	0.0015253	0.059709	3.4893E-05	2.6698	0.0015602	584.3771860005438	96.789	0.15626	96.894	96.785	96.941	0.105					7	4	2	0	0	0	1.0131	1	40513	40513		2.9952	1.5133	1	1287100			8668	2405	4189	4211	10566	10566					0.16199412879313968
GVKCDPESEK	10	Unmodified	_GVKCDPESEK_					0	0	0		ENSG00000242550|ENST00000238508|SERPINB10	ENSG00000242550|ENST00000238508|SERPINB10	ENSG00000242550|ENST00000238508|SERPINB10	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.2558471560478	2	546.255514	1090.49647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.455	1	31.455	30.955	31.955	0								0	0	0	0.66031	1	13181	13181		3.9444	0.66309	1				8669	5345	4190	4212	10567	10567					-0.045154052589850835
GVKEKFYR	8	Unmodified	_GVKEKFYR_					0	0	0			REV__tr|A0A553STQ6|A0A553STQ6_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05570PE=4SV=1	REV__tr|A0A553STQ6|A0A553STQ6_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05570PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7906371951103	2	513.790184	1025.56581	1.5397	0.00079106	3.2986	0.0016948	4.8383	0.0024859	513.7913569233076	30.65	0.39769	30.65	30.498	30.896	0					18	12	2	0	0	0	0.88791	2	12840	12840;12895		2.5775	0.51773	1	545250	+		8670	15253	4191	4213	10568;10569	10568					0.05405466542742943
GVKEKFYR	8	Unmodified	_GVKEKFYR_					0	0	0			REV__tr|A0A553STQ6|A0A553STQ6_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05570PE=4SV=1	REV__tr|A0A553STQ6|A0A553STQ6_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05570PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	513.790184	1025.56581	1.5397	0.00079106	3.2986	0.0016948	4.8383	0.0024859	513.7913569233076	30.65	0.39769	30.65	30.498	30.896	0	0.045254	0.00029661	NaN	2.5775	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	545250	+		8671	15253	4191	4213							0.05405466542742943
GVKIPALT	8	Unmodified	_GVKIPALT_					0	0	0		COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	798.5072509646416	1	798.508366	797.501089	1.8305	0.0014617	-2.9367	-0.0023449	-1.1061	-0.00088326	798.5058480956909	78.424	0.40867	78.424	78.189	78.597	0					20	12	2	0	0	0	0.89176	2	32612	32612;32667		0.79363	0	1	1269800			8672	368	4192	4214	10570;10571	10570					0.09423891736730639
GVKIPALT	8	Unmodified	_GVKIPALT_					0	0	0		COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	798.508366	797.501089	1.8044	0.0014408	-3.7635	-0.0030052	-1.9591	-0.0015644	798.5049780021137	78.223	0.384	78.532	78.323	78.707	0.30933	0.029129	-0.00037167	NaN	0.79363	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1341900			8673	368	4192	4214							0.09423891736730639
GVKIPALT	8	Unmodified	_GVKIPALT_					0	0	0		COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	798.508366	797.501089	2.0871	0.0016666	-2.2955	-0.0018329	-0.20835	-0.00016637	798.5058746465643	77.272	0.22163	78.553	78.474	78.695	1.2809	0.049946	0.00080057	NaN	0.79363	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730480			8674	368	4192	4214							0.09423891736730639
GVKKLLKKIY	10	Unmodified	_GVKKLLKKIY_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2753478884697	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.06	1	113.23	112.73	113.73	0.16914								0	0	0	0.66254	1	49029	49029		0.15932	0	1		+		8675	15564	4193	4215	10572	10572					0.20896880155714825
GVKKLLKKIY	10	Unmodified	_GVKKLLKKIY_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2746765017509	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119	1	119.23	118.73	119.73	0.23128								0	0	0	0.66254	1	51423	51423		0.15932	0	1		+		8676	15564	4193	4215	10573	10573					0.20896880155714825
GVKKLLKKIY	10	Unmodified	_GVKKLLKKIY_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2741882205009	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.56	1	108.71	108.21	109.21	0.1548								0	0	0	0.66254	1	46891	46891		0.15932	0	1		+		8677	15564	4193	4215	10574	10574					0.20896880155714825
GVKKLLKKIY	10	Unmodified	_GVKKLLKKIY_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2742187380791	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.94	1	109.1	108.6	109.6	0.1548								0	0	0	0.66254	1	47139	47139		0.15932	0	1		+		8678	15564	4193	4215	10575	10575					0.20896880155714825
GVKKWRKR	8	Unmodified	_GVKKWRKR_					0	0	0			REV__ENST00000304141.4_1_2:192701235-192701394:-|nuORF	REV__ENST00000304141.4_1_2:192701235-192701394:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	354.0396301150322	3	353.229565	1056.66687	1.805	0.00063756	2.2719	0.00080251	4.0769	0.0014401	353.2304685797941	48.159	0.58346	50.136	49.806	50.39	1.9772					26	18	2	0	0	0	2.3239	1	20161	20161		0.45834	0.18932	1	1662800	+		8679	12329	4194	4216	10576	10576					0.14079963036101617
GVKLVNDLAH	10	Unmodified	_GVKLVNDLAH_					0	0	0		nc|ENSG00000102385|Q13474-2|DRP2;ENSG00000102385|ENST00000395209|DRP2	nc|ENSG00000102385|Q13474-2|DRP2	nc|ENSG00000102385|Q13474-2|DRP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3080932497978	2	533.306198	1064.59784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.631	1	44.984	44.484	45.484	1.3536								0	0	0	0.66155	1	18293	18293		1.8442	0.36234	1				8680	1389	4195	4217	10577	10577					0.06812834225888764
GVKPGVPA	8	Unmodified	_GVKPGVPA_					0	0	0		tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	724.4346191287041	1	724.435201	723.427924	1.9387	0.0014044	-3.7543	-0.0027197	-1.8156	-0.0013153	724.432190001134	73.501	0.54807	73.501	73.216	73.764	0					23	17	2	0	0	0	0.89176	1	30617	30617		0.79363	0	1	863500			8681	16544	4196	4218	10578	10578					0.05514763014127766
GVKPGVPA	8	Unmodified	_GVKPGVPA_					0	0	0		tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	724.4349243044853	1	724.435201	723.427924	1.6221	0.0011751	-2.9965	-0.0021708	-1.3744	-0.00099565	724.4328635006916	71.558	0.47836	71.882	71.622	72.101	0.32359					33	14	3	0	0	0	0.89176	3	29894	29894;29941;29982		0.79363	0	1	2915100			8682	16544	4196	4218	10579;10580;10581	10579					0.05514763014127766
GVKPGVPA	8	Unmodified	_GVKPGVPA_					0	0	0		tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	724.4339477419853	1	724.435201	723.427924	2.1847	0.0015827	-4.4023	-0.0031892	-2.2175	-0.0016065	724.4319974061898	73.26	0.4447	73.584	73.371	73.816	0.32494					22	14	2	0	0	0	0.89176	2	30626	30626;30695		0.79363	0	1	1390800			8683	16544	4196	4218	10582;10583	10582					0.05514763014127766
GVKPGVPA	8	Unmodified	_GVKPGVPA_					0	0	0		tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.4349853396416	1	724.435201	723.427924	1.5258	0.0011054	-3.3658	-0.0024383	-1.8399	-0.0013329	724.4327740902527	70.209	0.44433	72.047	71.784	72.228	1.8378					21	13	2	0	0	0	0.89176	1	29411	29411		0.79363	0	1	2281000			8684	16544	4196	4218	10584	10584					0.05514763014127766
GVKPGVPA	8	Unmodified	_GVKPGVPA_					0	0	0		tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.4352905154228	1	724.435201	723.427924	2.0472	0.0014831	-3.1783	-0.0023025	-1.1311	-0.00081939	724.4326893270318	71.991	0.36435	73.815	73.601	73.966	1.8239					15	11	2	0	0	0	0.89176	1	30233	30233		0.79363	0	1	1146900			8685	16544	4196	4218	10585	10585					0.05514763014127766
GVKPHRYR	8	Unmodified	_GVKPHRYR_					0	0	0		ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7920104861259	2	506.793592	1011.57263	0.62792	0.00031823	-2.4739	-0.0012538	-1.846	-0.00093555	506.7920511196814	15.002	0.12476	15.115	15.038	15.163	0.11295					6	3	2	0	0	0	0.89008	1	6232	6232		2.5775	0.27475	1	573620			8686	4858	4197	4219	10586	10586					0.06730824213980213
GVKPHRYR	8	Unmodified	_GVKPHRYR_					0	0	0		ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7928649783134	2	506.793592	1011.57263	0.63864	0.00032366	-1.542	-0.0007815	-0.90341	-0.00045784	506.792862163838	15.179	0.15635	15.292	15.194	15.35	0.11295					6	4	2	0	0	0	0.89008	1	6311	6311		2.5775	0.27475	1	767620			8687	4858	4197	4219	10587	10587					0.06730824213980213
GVKPHRYR	8	Unmodified	_GVKPHRYR_					0	0	0		ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7936279177666	2	506.793592	1011.57263	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.593	1	15.362	14.862	15.862	0.76937								0	0	0	1.0178	1	6066	6066		2.5775	0.51773	1				8688	4858	4197	4219	10588	10588					0.06730824213980213
GVKPQKPGF	9	Unmodified	_GVKPQKPGF_					0	0	0		ENSG00000262152|ENST00000573315|GREP1	ENSG00000262152|ENST00000573315|GREP1	ENSG00000262152|ENST00000573315|GREP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	479.2816955447197	2	479.279452	956.544351	2.6042	0.0012481	-1.7345	-0.00083132	0.86964	0.0004168	479.27921221883975	62.845	1.1168	64.789	64.195	65.312	1.9444					55	35	2	0	0	0	0.116	1	26451	26451		2.3027	0	1	1043000			8689	5426	4198	4220	10589	10589					0.0643408151404401
GVKQYNEK	8	Unmodified	_GVKQYNEK_					0	0	0			REV__ENST00000523637.2_1_8:9953486-10177544:+|nuORF	REV__ENST00000523637.2_1_8:9953486-10177544:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2563354372978	2	483.256174	964.497795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.267	1	34.091	33.591	34.591	1.8246								0	0	0	1.0178	1	13525	13525		2.5775	0	1		+		8690	13644	4199	4221	10590	10590					0.014125968920893683
GVKRYLRRS	9	Unmodified	_GVKRYLRRS_					0	0	0		nc|ENSG00000179886|Q53EQ6-2|TIGD5;ENSG00000179886|ENST00000504548|TIGD5	nc|ENSG00000179886|Q53EQ6-2|TIGD5	nc|ENSG00000179886|Q53EQ6-2|TIGD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.8469726443291	2	567.846356	1133.67816	2.4557	0.0013945	-1.2884	-0.00073164	1.1672	0.00066281	567.8458730941629	85.542	0.86931	85.795	85.291	86.16	0.25227					44	27	2	0	0	0	0.84963	1	35836	35836		0.6015	0.076735	1	926650			8691	4530	4200	4222	10591	10591					0.11666740339592252
GVKSAPLA	8	Unmodified	_GVKSAPLA_					0	0	0		ENST00000460865.3_1_3:133560493-133614670:-|nuORF	ENST00000460865.3_1_3:133560493-133614670:-|nuORF	ENST00000460865.3_1_3:133560493-133614670:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1011535525322	2	371.726521	741.438489	-1.6686	-0.00062027	4.4095	0.0016391	2.7409	0.0010189	371.72815185947127	16.675	0.19072	16.675	16.531	16.722	0					9	5	2	0	0	0	2.3239	1	6922	6922		2.8892	0.31174	1	290800			8692	6667	4201	4223	10592	10592					0.05742745668567295
GVKSAPLA	8	Unmodified	_GVKSAPLA_					0	0	0		ENST00000460865.3_1_3:133560493-133614670:-|nuORF	ENST00000460865.3_1_3:133560493-133614670:-|nuORF	ENST00000460865.3_1_3:133560493-133614670:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	371.726521	741.438489	0.22326	8.2992E-05	4.815	0.0017898	5.0382	0.0018728	371.72789890382785	16.277	0.20396	16.408	16.272	16.476	0.13022	-0.13368	0.00017236	NaN	2.8892	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342100			8693	6667	4201	4223							0.05742745668567295
GVKTWEYR	8	Unmodified	_GVKTWEYR_					0	0	0		tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1401855349541	2	519.771991	1037.52943	2.6229	0.0013633	0.068402	3.5554E-05	2.6913	0.0013989	519.7724929379482	84.131	0.31744	84.392	84.248	84.565	0.26083					19	9	3	0	0	0	2.3239	1	35143	35143		0.79363	0	1	738110			8694	17214	4202	4224	10593	10593					0.012165896460373915
GVKVGYKP	8	Unmodified	_GVKVGYKP_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	424.3058044314384	2	424.255446	846.496338	0.10172	4.3154E-05	2.164	0.00091808	2.2657	0.00096123	424.2563751131116	12.073	0.15813	12.86	12.813	12.971	0.78751					6	4	2	0	0	0	2.3239	1	5029	5029		2.5775	0.51773	1	198480	+		8695	9606	4203	4225	10594	10594					0.06695007593987157
GVKVHFRIPVT	11	Unmodified	_GVKVHFRIPVT_					0	0	0			REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	417.9217101931572	3	418.255669	1251.74518	0.7204	0.00030131	4.2633	0.0017832	4.9837	0.0020845	418.25808679225645	29.918	0.27612	31.201	30.98	31.256	1.2825					13	8	2	0	0	0	0.14606	1	12540	12540		2.2527	1.2905	1	1933400	+		8696	15030	4204	4226	10595	10595					0.1293735083067986
GVKVLAWEK	9	Unmodified	_GVKVLAWEK_					0	0	0		ENST00000313146.10_1_1:156697916-156698111:-|nuORF	ENST00000313146.10_1_1:156697916-156698111:-|nuORF	ENST00000313146.10_1_1:156697916-156698111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.3099853396416	2	515.30821	1028.60187	2.209	0.0011383	0.32286	0.00016637	2.5318	0.0013047	515.3086554964119	81.22	1.0047	81.22	80.728	81.733	0					44	32	2	0	0	0	0.77526	1	33798	33798		4.3292	0	1	1064100			8697	5810	4205	4227	10596	10596					0.08870923719587154
GVKVLAWEK	9	Unmodified	_GVKVLAWEK_					0	0	0		ENST00000313146.10_1_1:156697916-156698111:-|nuORF	ENST00000313146.10_1_1:156697916-156698111:-|nuORF	ENST00000313146.10_1_1:156697916-156698111:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	515.30821	1028.60187	2.1317	0.0010985	1.644	0.00084715	3.7757	0.0019456	515.3096468577795	80.898	0.62218	81.188	80.778	81.4	0.29056	-0.015794	0.00095318	NaN	4.3292	32	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	894340			8698	5810	4205	4227							0.08870923719587154
GVKVYDLV	8	Unmodified	_GVKVYDLV_					0	0	0			REV__FARP1|p.E353V|1|0.14|ENSG00000152767|chr13:98390850-98390850|A/T|missense_variant	REV__FARP1|p.E353V|1|0.14|ENSG00000152767|chr13:98390850-98390850|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	447.3476440310478	2	446.760561	891.506569	3.2233	0.0014401	-0.99114	-0.0004428	2.2322	0.00099726	446.76016200460236	70.567	0.29111	71.921	71.775	72.066	1.3536					13	8	2	0	0	0	2.3239	1	29662	29662		0	0	1	1566600	+		8699	14160	4206	4228	10597	10597					0.05647570528549295
GVKVYDLV	8	Unmodified	_GVKVYDLV_					0	0	0			REV__FARP1|p.E353V|1|0.14|ENSG00000152767|chr13:98390850-98390850|A/T|missense_variant	REV__FARP1|p.E353V|1|0.14|ENSG00000152767|chr13:98390850-98390850|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	446.760561	891.506569	2.5591	0.0011433	-1.1429	-0.00051061	1.4162	0.00063269	446.7602209511365	70.06	0.38568	71.898	71.687	72.073	1.8378	-0.01136	-7.0467E-05	NaN	0	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1889900	+		8700	14160	4206	4228							0.05647570528549295
GVKWARLPRL	10	Unmodified	_GVKWARLPRL_					0	0	0			REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	REV__ENST00000485975.1_1_9:139264538-139264880:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2516052126884	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.762	1	28.762	28.262	29.262	0								0	0	0	0.66222	1	12037	12037		0.69767	0.1345	1		+		8701	13392	4207	4229	10598	10598					0.14536787896099668
GVLCMWQC	8	Unmodified	_GVLCMWQC_					0	0	0		ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	470.2008544802666	2	470.197902	938.38125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.049	1	74.374	73.874	74.874	0.32494								0	0	0	1.0178	1	30975	30975		2.5775	0	1				8702	5340	4208	4230	10599	10599					-0.09040504195320409
GVLDPGCILL	10	Unmodified	_GVLDPGCILL_					0	0	0		ENST00000503674.5_1_5:250762-256532:+|nuORF	ENST00000503674.5_1_5:250762-256532:+|nuORF	ENST00000503674.5_1_5:250762-256532:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2788268923759	2	500.280803	998.547053	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.695	1	33.973	33.473	34.473	1.2782								0	0	0	0.65773	1	13712	13712		7.2892	2.0586	1				8703	6989	4209	4231	10600	10600					0.04772168856698045
GVLDTLTKV	9	Unmodified	_GVLDTLTKV_					0	0	0		ENST00000495043.5_1_1:39330344-39338774:-|nuORF;ENSG00000214114|ENST00000397572|MYCBP	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2855712771416	2	473.2844	944.554247	2.4719	0.0011699	1.6853	0.00079764	4.1573	0.0019676	473.28501482227415	53.889	0.28626	53.889	53.712	53.998	0					11	8	2	0	0	0	0.12251	1	22474	22474		41.84	7.4379	1	604880			8704	5236	4210	4232	10601	10601					0.07975224728750163
GVLDTLTKV	9	Unmodified	_GVLDTLTKV_					0	0	0		ENST00000495043.5_1_1:39330344-39338774:-|nuORF;ENSG00000214114|ENST00000397572|MYCBP	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	473.2844	944.554247	2.5573	0.0012103	-0.91448	-0.00043281	1.6428	0.00077752	473.2835848929839	53.316	0.21925	53.639	53.475	53.694	0.32283	-0.013406	-0.00073685	NaN	41.84	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479880			8705	5236	4210	4232							0.07975224728750163
GVLDTLTKV	9	Unmodified	_GVLDTLTKV_					0	0	0		ENST00000495043.5_1_1:39330344-39338774:-|nuORF;ENSG00000214114|ENST00000397572|MYCBP	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	473.2844	944.554247	1.2317	0.00058294	-1.6057	-0.00075994	-0.37398	-0.000177	473.283301094081	52.142	0.28322	53.539	53.368	53.652	1.3966	-0.11378	-0.0013911	NaN	41.84	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1109600			8706	5236	4210	4232							0.07975224728750163
GVLDTLTKV	9	Unmodified	_GVLDTLTKV_					0	0	0		ENST00000495043.5_1_1:39330344-39338774:-|nuORF;ENSG00000214114|ENST00000397572|MYCBP	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	ENST00000495043.5_1_1:39330344-39338774:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	473.2844	944.554247	0.90038	0.00042613	-1.1578	-0.00054796	-0.25741	-0.00012183	473.2832300746624	51.567	0.28149	53.543	53.398	53.679	1.9751	-0.10976	-0.00096716	NaN	41.84	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1047800			8707	5236	4210	4232							0.07975224728750163
GVLEVSSR	8	Unmodified	_GVLEVSSR_					0	0	0			REV__nc|ENSG00000214128|A2RRL7-4|TMEM213	REV__nc|ENSG00000214128|A2RRL7-4|TMEM213	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.7383300662041	2	423.737617	845.460681	2.3868	0.0010114	-1.8708	-0.00079274	0.51603	0.00021866	423.7366731856933	64.344	0.37788	66.272	66.077	66.455	1.928					16	11	2	0	0	0	0.88587	1	26991	26991		5.2307	0	1	897610	+		8708	14535	4211	4233	10602	10602					0.031769253463380664
GVLFIFLSLWA	11	Unmodified	_GVLFIFLSLWA_					0	0	0			REV__sp|F5HAM0|UL144_HCMVMMembraneglycoproteinUL144OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL144PE=3SV=1	REV__sp|F5HAM0|UL144_HCMVMMembraneglycoproteinUL144OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL144PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3708984255791	2	633.368267	1264.72198	2.3357	0.0014794	0.61045	0.00038664	2.9462	0.001866	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	1.0357	1	34562	34562		1.4819	1.0236	1	11549000	+		8709	14636	4212	4234	10603	10603					0.10020911993365189
GVLFRQRH	8	Unmodified	_GVLFRQRH_					0	0	0			REV__ENST00000570769.5_1_16:3707099-3707303:+|nuORF	REV__ENST00000570769.5_1_16:3707099-3707303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7957641482353	2	506.793592	1011.57263	0.56241	0.00028503	0.032613	1.6528E-05	0.59503	0.00030156	506.79507805739115	13.838	0.12427	13.937	13.873	13.998	0.09944					7	3	3	0	0	0	0.88958	1	5759	5759		2.8892	0	1	378510	+		8710	13964	4213	4235	10604	10604					0.06730824213991582
GVLFRQRH	8	Unmodified	_GVLFRQRH_					0	0	0			REV__ENST00000570769.5_1_16:3707099-3707303:+|nuORF	REV__ENST00000570769.5_1_16:3707099-3707303:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	506.793592	1011.57263	0.56241	0.00028503	0.032613	1.6528E-05	0.59503	0.00030156	506.79507805739115	13.838	0.12427	13.937	13.873	13.998	0.09944	-0.12057	-4.0202E-05	NaN	2.8892	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378510	+		8711	13964	4213	4235							0.06730824213991582
GVLGLHQRLW	10	Unmodified	_GVLGLHQRLW_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	589.3445922732353	2	589.843282	1177.67201	1.9522	0.0011515	1.2678	0.00074779	3.22	0.0018993	589.8440297586517	78.458	0.59227	78.458	78.314	78.907	0					33	18	2	0	0	0	0.12559	1	32759	32759		0.45834	0.057624	1	1152100	+		8712	11252	4214	4236	10605	10605					0.09028222108076989
GVLGLRRWHFL	11	Unmodified	_GVLGLRRWHFL_					0	0	0		L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|78|3|anti-sense	L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|78|3|anti-sense	L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|78|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9349853396416	3	451.934929	1352.78296	3.8071	0.0017206	-3.3664	-0.0015214	0.44078	0.0001992	451.93372045858547	82.437	1.408	83.649	82.791	84.199	1.2125					64	44	2	0	0	0	1.0388	1	34615	34615		0.50596	0.34663	1	1474100			8713	7726	4215	4237	10606	10606					0.12067861816171899
GVLGPPLQ	8	Unmodified	_GVLGPPLQ_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	780.4617187380791	1	780.461416	779.454139	2.5501	0.0019903	-3.2428	-0.0025309	-0.69264	-0.00054058	780.4588740894798	61.281	0.42641	62.699	62.439	62.865	1.4177					23	13	2	0	0	0	0.88958	1	25670	25670		2.8892	0	1	3351100			8714	7637	4216	4238	10607	10607					0.055590321856129776
GVLGPPLQ	8	Unmodified	_GVLGPPLQ_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	780.461416	779.454139	2.2334	0.0017431	-3.7123	-0.0028973	-1.4789	-0.0011542	780.4583790160989	62.414	0.46479	62.414	62.18	62.645	0	-0.22686	-0.00040173	NaN	2.8892	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3186600			8715	7637	4216	4238							0.055590321856129776
GVLGPPLQ	8	Unmodified	_GVLGPPLQ_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|327|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	780.461416	779.454139	1.8885	0.0014739	-2.9616	-0.0023114	-1.0731	-0.00083752	780.4589656812357	62.286	0.49722	62.616	62.321	62.819	0.32974	-0.025381	0.00018421	NaN	2.8892	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3462500			8716	7637	4216	4238							0.055590321856129776
GVLGTKELL	9	Unmodified	_GVLGTKELL_					0	0	0		DGKD|p.T856Yfs*5|1|0.17|ENSG00000077044|chr2:233457305-233457306|-/G|frameshift_variant;ENST00000490764.5_1_2:234327938-234366271:+|nuORF;nc|ENSG00000077044|Q16760-2|DGKD;ENSG00000077044|ENST00000264057|DGKD	DGKD|p.T856Yfs*5|1|0.17|ENSG00000077044|chr2:233457305-233457306|-/G|frameshift_variant	DGKD|p.T856Yfs*5|1|0.17|ENSG00000077044|chr2:233457305-233457306|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2864562869072	2	465.286943	928.559333	2.9675	0.0013807	-2.812	-0.0013084	0.15547	7.2338E-05	465.28551404344745	70.964	0.48708	72.305	72.054	72.541	1.3415					32	15	3	0	0	0	0.77526	2	29752	29752;29801		4.3292	0	1	7272500			8717	404	4217	4239	10608;10609	10608					0.09219528591370363
GVLGTLLLP	9	Unmodified	_GVLGTLLLP_					0	0	0			REV__nc|ENSG00000149091|Q13574-1|DGKZ	REV__nc|ENSG00000149091|Q13574-1|DGKZ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.7883178591728	2	441.786579	881.558604	1.4167	0.00062586	2.2262	0.00098351	3.6429	0.0016094	441.7875899299477	26.739	0.4009	27.001	26.802	27.203	0.26173					35	12	4	0	0	0	0.75267	1	11209	11209		5.2307	0.47466	1	16176000	+		8718	14459	4218	4240	10610	10610					0.11308733942325944
GVLGTLLLP	9	Unmodified	_GVLGTLLLP_					0	0	0			REV__nc|ENSG00000149091|Q13574-1|DGKZ	REV__nc|ENSG00000149091|Q13574-1|DGKZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	441.786579	881.558604	0.81329	0.0003593	3.7958	0.0016769	4.6091	0.0020362	441.78817759525305	27.39	0.36118	27.39	27.2	27.562	0	0.38001	0.00057014	NaN	5.2307	34	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17442000	+		8719	14459	4218	4240							0.11308733942325944
GVLGTLLLP	9	Unmodified	_GVLGTLLLP_					0	0	0			REV__nc|ENSG00000149091|Q13574-1|DGKZ	REV__nc|ENSG00000149091|Q13574-1|DGKZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	441.786579	881.558604	0.74097	0.00032735	3.36	0.0014844	4.101	0.0018118	441.78800879764447	25.115	0.33115	26.832	26.697	27.028	1.7167	-0.17814	0.00018513	NaN	5.2307	31	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16001000	+		8720	14459	4218	4240							0.11308733942325944
GVLGVVIEV	9	Unmodified	_GVLGVVIEV_					0	0	0			REV__tr|A0A7D7A008|A0A7D7A008_9CLOTSporematurationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22195PE=4SV=1	REV__tr|A0A7D7A008|A0A7D7A008_9CLOTSporematurationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22195PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	442.2405578494072	2	442.776211	883.537869	0.82737	0.00036634	3.1344	0.0013878	3.9618	0.0017542	442.77756927077115	27.143	0.21708	27.143	26.983	27.2	0					10	6	2	0	0	0	0.11787	1	11302	11302		5.2307	2.6532	1	627910	+		8721	15804	4219	4241	10611	10611					0.09144143562662066
GVLGVVIEV	9	Unmodified	_GVLGVVIEV_					0	0	0			REV__tr|A0A7D7A008|A0A7D7A008_9CLOTSporematurationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22195PE=4SV=1	REV__tr|A0A7D7A008|A0A7D7A008_9CLOTSporematurationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22195PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.7778503298759	2	442.776211	883.537869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.54	1	26.802	26.302	27.302	0.26173								0	0	0	0.42693	1	11095	11095		5.2307	2.6532	1		+		8722	15804	4219	4241	10612	10612					0.09144143562662066
GVLGVVTGV	9	Unmodified	_GVLGVVTGV_					0	0	0		MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant;ENSG00000124217|ENST00000244051|MOCS3	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	800.4889404177666	1	800.48763	799.480354	0.52338	0.00041896	1.0509	0.00084123	1.5743	0.0012602	800.4883097561168	56.487	0.24827	57.902	57.753	58.001	1.4145					12	7	2	0	0	0	0.052478	1	23690	23690		67.035	17.366	1	1309600			8723	2219	4220	4242	10613	10613					0.07259301357089498
GVLGVVTGV	9	Unmodified	_GVLGVVTGV_					0	0	0		MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant;ENSG00000124217|ENST00000244051|MOCS3	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	800.4886352419853	1	800.48763	799.480354	0.64222	0.00051409	-0.16174	-0.00012947	0.48049	0.00038462	800.4876040109243	55.94	0.21482	57.909	57.78	57.995	1.9684					9	6	2	0	0	0	0.030843	1	23458	23458		86.121	19.086	1	1452400			8724	2219	4220	4242	10614	10614					0.07259301357089498
GVLGVVTGV	9	Unmodified	_GVLGVVTGV_					0	0	0		MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant;ENSG00000124217|ENST00000244051|MOCS3	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MOCS3|p.A404Ffs*15|1|0.29|ENSG00000124217|chr20:50960050-50960051|-/ATTC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	800.48763	799.480354	2.3581	0.0018877	1.5723	0.0012586	3.9304	0.0031463	800.4889257001527	57.631	0.22375	57.954	57.822	58.046	0.32299	0.032206	0.00041507	NaN	86.121	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404580			8725	2219	4220	4242							0.07259301357089498
GVLGYYIIN	9	Unmodified	_GVLGYYIIN_					0	0	0		tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2814514040947	2	506.279118	1010.54368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.378	1	32.378	31.878	32.878	0								0	0	0	0.42693	1	13565	13565		5.2307	0.47466	1				8726	17023	4221	4243	10615	10615					0.03883242074323334
GVLIQKTKHK	10	Unmodified	_GVLIQKTKHK_					0	0	0			REV__tr|A0A553SP79|A0A553SP79_NIACICoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=NialliacirculansOX=1397GN=coaBCPE=3SV=1	REV__tr|A0A553SP79|A0A553SP79_NIACICoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=NialliacirculansOX=1397GN=coaBCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1532165408134	3	384.580152	1150.71863	0.65518	0.00025197	2.969	0.0011418	3.6242	0.0013938	384.5817304481006	22.125	0.5048	22.348	22.289	22.794	0.223					20	16	2	0	0	0	0.12556	1	9259	9259		0.69767	0.46182	1	649040	+		8727	15074	4222	4244	10616	10616					0.14929661939368088
GVLKILELVKK	11	Unmodified	_GVLKILELVKK_					0	0	0			REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4222900271416	2	620.423574	1238.83259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.129	1	82.129	81.629	82.629	0								0	0	0	0.63775	1	34213	34213		0.35063	0.35063	1		+		8728	14904	4223	4245	10617	10617					0.22273131981592087
GVLKILELVKK	11	Unmodified	_GVLKILELVKK_					0	0	0			REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4227172732353	2	620.423574	1238.83259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.41	1	82.41	81.91	82.91	0								0	0	0	0.63775	1	34332	34332		0.35063	0.043601	1		+		8729	14904	4223	4245	10618	10618					0.22273131981592087
GVLKILELVKK	11	Unmodified	_GVLKILELVKK_					0	0	0			REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4227172732353	2	620.423574	1238.83259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.715	1	82.715	82.215	83.215	0								0	0	0	0.63775	1	34461	34461		0.35063	0.35063	1		+		8730	14904	4223	4245	10619	10619					0.22273131981592087
GVLKILELVKK	11	Unmodified	_GVLKILELVKK_					0	0	0			REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4227783083916	2	620.423574	1238.83259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.123	1	82.403	81.903	82.903	0.2802								0	0	0	0.63775	1	34339	34339		0.35063	0.35063	1		+		8731	14904	4223	4245	10620	10620					0.22273131981592087
GVLKILELVKK	11	Unmodified	_GVLKILELVKK_					0	0	0			REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	REV__tr|A0A553SJH1|A0A553SJH1_NIACIMethionineABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4213744997978	2	620.423574	1238.83259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.275	1	82.555	82.055	83.055	0.2802								0	0	0	0.63775	1	34403	34403		0.35063	0.35063	1		+		8732	14904	4223	4245	10621	10621					0.22273131981592087
GVLLILSPRL	10	Unmodified	_GVLLILSPRL_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|299|2|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|299|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.9091979861259	3	360.909498	1079.70667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.089	1	24.304	23.804	24.804	1.2145								0	0	0	0.66227	1	9650	9650		0.62683	0	1		+		8733	14186	4224	4246	10622	10622					0.17000045196164137
GVLLLLLAK	9	Unmodified	_GVLLLLLAK_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MSMS	GG20161007_CRH_Patient100_W632_01	3	470.3335754275322	2	470.333696	938.652839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.88	1	93.751	93.251	94.251	0.87176								0	0	0	0.42693	1	39100	39100		0.6015	0	1		+		8734	10829	4225	4247	10623	10623					0.18105872764454034
GVLLLLLAK	9	Unmodified	_GVLLLLLAK_					0	0	0			REV__ENSG00000166508|ENST00000303887|MCM7	REV__ENSG00000166508|ENST00000303887|MCM7	MSMS	GG20161007_CRH_Patient100_W632_01	3	470.3343688845634	2	470.333696	938.652839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.065	1	94.807	94.307	95.307	0.74124								0	0	0	0.42693	1	39580	39580		0.6015	0	1		+		8735	10829	4225	4247	10624	10624					0.18105872764454034
GVLLSTIHGVK	11	Unmodified	_GVLLSTIHGVK_					0	0	0		tr|A0A7D6W2H2|A0A7D6W2H2_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06065PE=3SV=1	tr|A0A7D6W2H2|A0A7D6W2H2_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06065PE=3SV=1	tr|A0A7D6W2H2|A0A7D6W2H2_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06065PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3455688357353	2	562.345323	1122.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.578	1	43.902	43.402	44.402	0.32389								0	0	0	0.63775	1	18295	18295		1.3295	0.63916	1				8736	17033	4226	4248	10625	10625					0.11966266811123205
GVLQFRHL	8	Unmodified	_GVLQFRHL_					0	0	0		tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2862426638603	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.217	1	17.368	16.868	17.868	0.15093								0	0	0	1.0178	1	7141	7141		0.79363	0	1				8737	16256	4227	4249	10626	10626					0.07004903608185487
GVLQFRHL	8	Unmodified	_GVLQFRHL_					0	0	0		tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2878906130791	2	485.285069	968.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.938	1	28.685	28.185	29.185	1.747								0	0	0	1.0178	1	11272	11272		0.79363	0	1				8738	16256	4227	4249	10627	10627					0.07004903608185487
GVLQRTRG	8	Unmodified	_GVLQRTRG_					0	0	0		ENST00000523753.5_1_8:81032086-81083725:-|nuORF;ENST00000379096.9_2_8:80976822-81083761:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF	ENST00000523753.5_1_8:81032086-81083725:-|nuORF	ENST00000523753.5_1_8:81032086-81083725:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	886.5260497927666	1	886.521725	885.514448	1.7853	0.0015827	0.3269	0.0002898	2.1122	0.0018725	886.5219386750043	74.889	0.28171	74.889	74.745	75.027	0					16	8	2	0	0	0	0.89176	2	31176	31176;31224		0.79363	0	1	811000			8739	6209	4228	4250	10628;10629	10628					0.06711142568713058
GVLQRTRG	8	Unmodified	_GVLQRTRG_					0	0	0		ENST00000523753.5_1_8:81032086-81083725:-|nuORF;ENST00000379096.9_2_8:80976822-81083761:-|nuORF;ENST00000521354.5_1_8:80950353-81083761:-|nuORF	ENST00000523753.5_1_8:81032086-81083725:-|nuORF	ENST00000523753.5_1_8:81032086-81083725:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	886.5228149294853	1	886.521725	885.514448	2.6754	0.0023718	1.1655	0.0010332	3.8409	0.003405	886.5221535502727	74.742	0.34142	75.066	74.864	75.205	0.32464					16	10	2	0	0	0	0.89176	1	31287	31287		0.79363	0	1	798480			8740	6209	4228	4250	10630	10630					0.06711142568713058
GVLRQHQLR	9	Unmodified	_GVLRQHQLR_					0	0	0		ENST00000319836.7_1_10:45956824-45959774:-|nuORF	ENST00000319836.7_1_10:45956824-45959774:-|nuORF	ENST00000319836.7_1_10:45956824-45959774:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8295165896416	2	553.830706	1105.64686	1.1393	0.00063097	-1.5458	-0.00085609	-0.40649	-0.00022513	553.8296328426109	70.359	1.9249	70.359	69.047	70.972	0					100	61	3	0	0	0	0.77526	1	28926	28926		4.3292	1.7518	1	1989600			8741	5841	4229	4251	10631	10631					0.09826167305504896
GVLRQHQLR	9	Unmodified	_GVLRQHQLR_					0	0	0		ENST00000319836.7_1_10:45956824-45959774:-|nuORF	ENST00000319836.7_1_10:45956824-45959774:-|nuORF	ENST00000319836.7_1_10:45956824-45959774:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8313476443291	2	553.830706	1105.64686	1.5125	0.00083768	-0.44136	-0.00024444	1.0712	0.00059324	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.77526	1	30120	30120		4.3292	0	1	5931400			8742	5841	4229	4251	10632	10632					0.09826167305504896
GVLSLLFSRF	10	Unmodified	_GVLSLLFSRF_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|347|3|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|347|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2256042361259	3	380.225486	1137.65463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.99	1	112.99	112.49	113.49	0								0	0	0	0.66151	1	48829	48829		1.9064	0.9441	1		+		8743	8325	4230	4252	10633	10633					0.09130881782425604
GVLSLLLDL	9	Unmodified	_GVLSLLLDL_					0	0	0		HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|107|1|anti-sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|107|1|anti-sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|107|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	942.5860473513603	1	942.58701	941.579734	2.4266	0.0022873	-2.6516	-0.0024993	-0.22495	-0.00021203	942.5837320219952	75.734	0.28088	76.055	75.895	76.176	0.32164					11	8	2	0	0	0	0.22519	1	31676	31676		30.225	3.3412	1	436510			8744	7644	4231	4253	10634	10634					0.10660699251184269
GVLSSQDSPH	10	Unmodified	_GVLSSQDSPH_					0	0	0		ENSG00000240445|ENST00000395675|FOXO3B;nc|ENSG00000290687|P0CG31|ZNF286B	ENSG00000240445|ENST00000395675|FOXO3B	ENSG00000240445|ENST00000395675|FOXO3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7476684451103	2	513.74617	1025.47779	0.67451	0.00034653	2.0432	0.0010497	2.7177	0.0013962	513.7473371379857	9.8606	1.8933	9.8606	9.496	11.389	0					114	62	3	0	0	0	0.70618	6	4091	4091;4141;4184;4238;4290;4342		18.146	2.9685	1	2009400			8745	5332	4232	4254	10635;10636;10637;10638;10639;10640	10635					-0.03393198838512035
GVLTIISSI	9	Unmodified	_GVLTIISSI_					0	0	0			REV__tr|A0A553SUE4|A0A553SUE4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_06775PE=4SV=1	REV__tr|A0A553SUE4|A0A553SUE4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_06775PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7814514040947	2	451.781493	901.548434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.927	1	68.316	67.816	68.816	1.3888								0	0	0	0.40883	1	28075	28075		7.9102	2.1497	1		+		8746	15289	4233	4255	10641	10641					0.09372126217101595
GVLTKATVPI	10	Unmodified	_GVLTKATVPI_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.3484985232353	2	499.815867	997.617182	3.0647	0.0015318	-0.11594	-5.7947E-05	2.9488	0.0014739	500.3172514099766	93.513	0.46693	94.79	94.515	94.982	1.277					17	14	2	0	0	0	0.12529	1	39378	39378		6.2058	2.2614	1	622180			8747	2616	4234	4256	10642	10642					0.11827790516781533
GVLTKYDDR	9	Unmodified	_GVLTKYDDR_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.9642822146416	2	533.780013	1065.54547	0.65249	0.00034829	1.9804	0.0010571	2.6329	0.0014054	533.7810364020786	18.208	0.3809	19.187	18.932	19.312	0.97922					17	12	2	0	0	0	0.091909	1	7510	7510		20.454	0	1	633650	+		8748	10281	4235	4257	10643	10643					0.015322510922487709
GVLTRLRAD	9	Unmodified	_GVLTRLRAD_					0	0	0		nc|ENSG00000095752|P20809-2|IL11;ENSG00000095752|ENST00000264563|IL11	nc|ENSG00000095752|P20809-2|IL11	nc|ENSG00000095752|P20809-2|IL11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7982665896416	2	500.79854	999.582528	2.5174	0.0012607	-0.35401	-0.00017729	2.1633	0.0010834	500.7983536312579	76.192	0.47296	77.959	77.782	78.255	1.7672					32	14	3	0	0	0	0.83213	1	31949	31949		2.0598	0	1	2384700			8749	1189	4236	4258	10644	10644					0.08271967428686366
GVLVGDLS	8	Unmodified	_GVLVGDLS_					0	0	0			REV__ENSG00000136699|ENST00000680298|SMPD4	REV__ENSG00000136699|ENST00000680298|SMPD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2169677615166	2	380.215986	758.417419	0.4019	0.00015281	2.3971	0.00091143	2.799	0.0010642	380.2166902714722	26.274	0.48514	28.021	27.733	28.218	1.747					37	15	3	0	0	0	0.88958	1	10938	10938		2.8892	0	1	9115100	+		8750	9987	4237	4259	10645	10645					0.02854735569053446
GVLWFIMKKWQ	11	Unmodified	_GVLWFIMKKWQ_					0	0	0			REV__tr|A0A553SJC7|A0A553SJC7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16465PE=4SV=1	REV__tr|A0A553SJC7|A0A553SJC7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	718.4026367068291	2	718.399576	1434.7846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.93	1	113.98	113.48	114.48	0.044189								0	0	0	0.63775	1	49058	49058		0.35063	0.35063	1		+		8751	14896	4238	4260	10646	10646					0.0845973478990345
GVMAVKKGK	9	Unmodified	_GVMAVKKGK_					0	0	0			REV__nc|ENSG00000123191|P35670-2|ATP7B	REV__nc|ENSG00000123191|P35670-2|ATP7B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1731445193291	2	459.28368	916.552807	2.6176	0.0012022	2.1525	0.00098859	4.7701	0.0021908	459.2841114559373	82.979	0.25346	84.649	84.415	84.668	1.67					13	7	3	0	0	0	0.11908	1	34753	34753		2.0598	1.2661	1	1538200	+		8752	9620	4239	4261	10647	10647					0.09119312159009496
GVMESVIAL	9	Unmodified	_GVMESVIAL_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000554481.1_1_15:91489865-91490237:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	918.4970580935478	1	918.496481	917.489204	1.4825	0.0013616	0.22572	0.00020733	1.7082	0.001569	918.4971784852527	70.195	0.27899	70.195	70.024	70.303	0					12	8	2	0	0	0	0.34572	1	29226	29226		23.148	6.2061	1	724910			8753	2925	4240	4262	10648	10648					0.027159069312460815
GVMESVIAL	9	Unmodified	_GVMESVIAL_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000554481.1_1_15:91489865-91490237:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	918.5033447146416	1	918.496481	917.489204	1.3781	0.0012658	0.86473	0.00079426	2.2428	0.00206	918.4980005035552	69.695	0.3132	70.017	69.847	70.16	0.32224					15	9	2	0	0	0	0.46905	1	29143	29143		16.942	4.4107	1	771350			8754	2925	4240	4262	10649	10649					0.027159069312460815
GVMESVIAL	9	Unmodified	_GVMESVIAL_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000554481.1_1_15:91489865-91490237:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5004150271416	1	918.496481	917.489204	2.0774	0.0019081	-0.39075	-0.0003589	1.6867	0.0015492	918.4969501052469	68.551	0.4278	69.917	69.694	70.122	1.3657					30	13	3	0	0	0	0.087207	2	28818	28760;28818		53.576	7.9264	1	2437300			8755	2925	4240	4262	10650;10651	10651					0.027159069312460815
GVMESVIAL	9	Unmodified	_GVMESVIAL_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000554481.1_1_15:91489865-91490237:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.4998046755791	1	918.496481	917.489204	2.2986	0.0021113	0.14907	0.00013692	2.4477	0.0022482	918.4967750537808	68.057	0.40063	69.927	69.704	70.105	1.87					28	12	3	0	0	0	0.087207	1	28567	28567		53.576	9.1686	1	2269200			8756	2925	4240	4262	10652	10652					0.027159069312460815
GVMIVKHLA	9	Unmodified	_GVMIVKHLA_					0	0	0			REV__ENSG00000144118|ENST00000272519|RALB	REV__ENSG00000144118|ENST00000272519|RALB	MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2905456423759	2	484.291505	966.568457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.049	1	29.825	29.325	30.325	1.7754								0	0	0	0.42693	1	11741	11741		2.0598	0	1		+		8757	8507	4241	4263	10653	10653					0.08383598676050497
GVMLCGSH	8	Unmodified	_GVMLCGSH_					0	0	0		nc|ENSG00000189056|P78509-3|RELN;nc|ENSG00000189056|P78509-2|RELN;ENSG00000189056|ENST00000428762|RELN	nc|ENSG00000189056|P78509-3|RELN	nc|ENSG00000189056|P78509-3|RELN	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807128787041	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.64	1	30.64	30.14	31.14	0								0	0	0	1.0178	1	12833	12833		2.5775	1.7838	1				8758	4892	4242	4264	10654	10654					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807433962822	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.278	1	30.278	29.778	30.778	0								0	0	0	1.0178	1	12678	12678		0.79363	0	1				8759	2504	4243	4265	10655	10655					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1806518435478	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.397	1	30.397	29.897	30.897	0								0	0	0	1.0178	1	12729	12729		0.79363	0	1				8760	2504	4243	4265	10656	10656					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805297732353	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.763	1	30.763	30.263	31.263	0								0	0	0	1.0178	1	12885	12885		0.79363	0	1				8761	2504	4243	4265	10657	10657					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805908083916	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.952	1	30.952	30.452	31.452	0								0	0	0	1.0178	1	12965	12965		0.79363	0	1				8762	2504	4243	4265	10658	10658					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1808349490166	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.194	1	31.194	30.694	31.694	0								0	0	0	1.0178	1	13069	13069		0.79363	0	1				8763	2504	4243	4265	10659	10659					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1803771853447	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.311	1	31.311	30.811	31.811	0								0	0	0	1.0178	1	13120	13120		0.79363	0	1				8764	2504	4243	4265	10660	10660					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1809265017509	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.435	1	31.435	30.935	31.935	0								0	0	0	1.0178	1	13173	13173		0.79363	0	1				8765	2504	4243	4265	10661	10661					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800414919853	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.456	1	15.225	14.725	15.725	0.76937								0	0	0	1.0178	1	6009	6009		0.79363	0	1				8766	2504	4243	4265	10662	10662					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1795837283134	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.679	1	15.448	14.948	15.948	0.76937								0	0	0	1.0178	1	6101	6101		0.79363	0	1				8767	2504	4243	4265	10663	10663					-0.06250004011758392
GVMVCTGH	8	Unmodified	_GVMVCTGH_					0	0	0		FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant;nc|ENSG00000131781|P49326-2|FMO5;nc|ENSG00000131781|P49326-3|FMO5;ENSG00000131781|ENST00000254090|FMO5	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	FMO5|p.R264Kfs*3|1|0.61|ENSG00000131781|chr1:147208893-147208894|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1798278689384	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.799	1	15.569	15.069	16.069	0.76937								0	0	0	1.0178	1	6151	6151		0.79363	0	1				8768	2504	4243	4265	10664	10664					-0.06250004011758392
GVNDFNGD	8	Unmodified	_GVNDFNGD_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	837.3328124880791	1	837.337337	836.330061	1.2284	0.0010286	-3.6584	-0.0030633	-2.43	-0.0020347	837.3335825247644	100.39	0.15311	100.39	100.29	100.44	0					10	4	3	0	0	0	0.89008	1	42021	42021		2.5775	1.7838	1	7832600	+		8769	15846	4244	4266	10665	10665					-0.09465090372509621
GVNDFNGD	8	Unmodified	_GVNDFNGD_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	837.337337	836.330061	1.2284	0.0010286	-3.6584	-0.0030633	-2.43	-0.0020347	837.3335825247644	100.39	0.15311	100.39	100.29	100.44	0	0	0	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7832600	+		8770	15846	4244	4266							-0.09465090372509621
GVNEFIFMDE	10	Unmodified	_GVNEFIFMDE_					0	0	0			REV__ENSG00000183155|ENST00000367262|RABIF	REV__ENSG00000183155|ENST00000367262|RABIF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0450012087822	3	400.846235	1199.51688	-0.57405	-0.0002301	0.13265	5.3174E-05	-0.44139	-0.00017693	400.8466595787918	22.512	0.14654	22.512	22.432	22.578	0					6	4	2	0	0	0	0.12559	1	9356	9356		0.15932	0	1	277630	+		8771	11378	4245	4267	10666	10666					-0.07490234599185897
GVNEIHLNK	9	Unmodified	_GVNEIHLNK_					0	0	0		tr|A0A7D6ZJD8|A0A7D6ZJD8_9CLOTPHPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10770PE=4SV=1	tr|A0A7D6ZJD8|A0A7D6ZJD8_9CLOTPHPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10770PE=4SV=1	tr|A0A7D6ZJD8|A0A7D6ZJD8_9CLOTPHPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10770PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.8572570681572	3	341.857574	1022.55089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.848	1	13.635	13.135	14.135	0.78751								0	0	0	0.317	1	5329	5329		11.495	0.6952	1				8772	17108	4246	4268	10667	10667					0.0405197467475773
GVNESSPK	8	Unmodified	_GVNESSPK_					0	0	0			REV__FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	REV__FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2049133181572	2	409.20615	816.397747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.941	1	23.941	23.441	24.441	0								0	0	0	1.0178	1	9985	9985		5.7604	0	1		+		8773	8860	4247	4269	10668	10668					-0.017796404417140366
GVNEYRHWI	9	Unmodified	_GVNEYRHWI_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2919799685478	2	587.293622	1172.57269	1.9107	0.0011221	-1.1661	-0.00068486	0.74456	0.00043728	587.2929186087231	56.84	0.27644	58.254	58.093	58.369	1.4145					16	8	3	0	0	0	0.44535	1	23802	23802		18.135	4.5201	1	4177900			8774	770	4248	4270	10669	10669					-0.006692205766512416
GVNFEVQRG	9	Unmodified	_GVNFEVQRG_					0	0	0		tr|A0A553SU01|A0A553SU01_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06055PE=4SV=1	tr|A0A553SU01|A0A553SU01_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06055PE=4SV=1	tr|A0A553SU01|A0A553SU01_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06055PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2610961794853	2	503.259248	1004.50394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.339	1	26.024	25.524	26.524	1.6845								0	0	0	0.42693	1	10166	10166		2.0598	0.21551	1				8775	16676	4249	4271	10670	10670					0.0018711512361733185
GVNGGPLK	8	Unmodified	_GVNGGPLK_					0	0	0		nc|ENSG00000120519|Q0GE19-3|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7;nc|ENSG00000120519|Q0GE19-6|SLC10A7;nc|ENSG00000120519|Q0GE19-7|SLC10A7;nc|ENSG00000120519|Q0GE19-5|SLC10A7;nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	741.4260131716728	1	741.425365	740.418088	2.5659	0.0019025	-3.1878	-0.0023635	-0.62186	-0.00046106	741.4231887284592	88.965	0.4454	88.965	88.732	89.178	0					18	13	2	0	0	0	0.89008	1	37205	37205		2.5775	0	1	588920			8776	2106	4250	4272	10671	10671					0.03749575008748707
GVNGGPLK	8	Unmodified	_GVNGGPLK_					0	0	0		nc|ENSG00000120519|Q0GE19-3|SLC10A7;ENSG00000120519|ENST00000335472|SLC10A7;nc|ENSG00000120519|Q0GE19-1|SLC10A7;nc|ENSG00000120519|Q0GE19-6|SLC10A7;nc|ENSG00000120519|Q0GE19-7|SLC10A7;nc|ENSG00000120519|Q0GE19-5|SLC10A7;nc|ENSG00000120519|Q0GE19-4|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	nc|ENSG00000120519|Q0GE19-3|SLC10A7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	741.4246093630791	1	741.425365	740.418088	2.5799	0.0019128	-3.6443	-0.002702	-1.0644	-0.00078918	741.4224852772803	88.739	0.38808	88.963	88.745	89.133	0.22359					19	11	2	0	0	0	0.89008	1	37206	37206		2.5775	0	1	583440			8777	2106	4250	4272	10672	10672					0.03749575008748707
GVNGNIDD	8	Unmodified	_GVNGNIDD_					0	0	0			REV__tr|A0A7D6ZZE0|A0A7D6ZZE0_9CLOTP1familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05700PE=3SV=1	REV__tr|A0A7D6ZZE0|A0A7D6ZZE0_9CLOTP1familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05700PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1801025271416	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.154	1	25.838	25.338	26.338	1.6845								0	0	0	1.0178	1	10087	10087		0.79363	0	1		+		8778	15791	4251	4273	10673	10673					-0.06336803855481321
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9504882693291	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.981	1	19.981	19.481	20.481	0								0	0	0	0.63775	1	8304	8304		1.3295	0.13619	1				8779	110	4252	4274	10674	10674					0.19754465839127988
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9506103396416	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.136	1	20.136	19.636	20.636	0								0	0	0	0.63775	1	8369	8369		1.3295	0.92882	1				8780	110	4252	4274	10675	10675					0.19754465839127988
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9502441287041	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.376	1	20.376	19.876	20.876	0								0	0	0	0.63775	1	8470	8470		1.3295	0.92882	1				8781	110	4252	4274	10676	10676					0.19754465839127988
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9515258669853	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.549	1	28.549	28.049	29.049	0								0	0	0	0.63775	1	11946	11946		1.3295	0.13619	1				8782	110	4252	4274	10677	10677					0.19754465839127988
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9498168826103	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.665	1	28.665	28.165	29.165	0								0	0	0	0.63775	1	11995	11995		1.3295	0.13619	1				8783	110	4252	4274	10678	10678					0.19754465839127988
GVNRRPRKRKR	11	Unmodified	_GVNRRPRKRKR_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9523803591728	2	711.953084	1421.89161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.897	1	28.897	28.397	29.397	0								0	0	0	0.63775	1	12095	12095		1.3295	0.92882	1				8784	110	4252	4274	10679	10679					0.19754465839127988
GVNRVHMPSR	10	Unmodified	_GVNRVHMPSR_					0	0	0			REV__ENSG00000171295|ENST00000304060|ZNF440	REV__ENSG00000171295|ENST00000304060|ZNF440	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.8051025271416	2	576.806374	1151.59819	0.82006	0.00047301	-2.6232	-0.0015131	-1.8032	-0.0010401	576.8047231239269	22.15	0.4349	22.15	21.966	22.401	0					27	13	3	0	0	0	0.82019	1	9202	9202		10.074	0.6908	1	1463200	+		8785	11018	4253	4275	10680	10680					0.028459306740842294
GVNSPYQLIYH	11	Unmodified	_GVNSPYQLIYH_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889343142509	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.818	1	18.121	17.621	18.621	1.3023								0	0	0	0.63775	1	6985	6985		0.50596	0.051438	1				8786	2486	4254	4276	10681	10681					0.007201845634881465
GVNSTRRQ	8	Unmodified	_GVNSTRRQ_					0	0	0			REV__ENST00000525247.1_1_11:86130859-86133754:+|nuORF	REV__ENST00000525247.1_1_11:86130859-86133754:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1731140017509	2	459.249215	916.483876	1.8401	0.00084506	1.4438	0.00066306	3.2839	0.0015081	459.2497318344501	72.111	0.22133	72.111	72.016	72.237	0					9	6	2	0	0	0	2.3239	1	30076	30076		0.6015	0.076735	1	677190	+		8787	10361	4255	4277	10682	10682					0.0222936418365407
GVNVNIPGLT	10	Unmodified	_GVNVNIPGLT_					0	0	0			REV__ENSG00000114126|ENST00000489671|TFDP2	REV__ENSG00000114126|ENST00000489671|TFDP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2830688357353	2	492.279649	982.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.772	1	92.138	91.638	92.638	1.366								0	0	0	0.66166	1	38226	38226		1.6526	0	1		+		8788	9401	4256	4278	10683	10683					0.05277456443218398
GVNWHKMP	8	Unmodified	_GVNWHKMP_					0	0	0			REV__tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	REV__tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7433349490166	2	484.742179	967.469806	1.4951	0.00072473	0.60684	0.00029416	2.1019	0.0010189	484.74269491470244	24.443	0.24636	25.684	25.547	25.794	1.241					21	7	3	0	0	0	0.88958	1	10243	10243		2.8892	0.31174	1	4795100	+		8789	15307	4257	4279	10684	10684					-0.015230045689804683
GVPASILE	8	Unmodified	_GVPASILE_					0	0	0		ZBTB25|p.D278G|1|0.08|ENSG00000089775|chr14:64487398-64487398|T/C|missense_variant;ENSG00000089775|ENST00000608382|ZBTB25	ZBTB25|p.D278G|1|0.08|ENSG00000089775|chr14:64487398-64487398|T/C|missense_variant	ZBTB25|p.D278G|1|0.08|ENSG00000089775|chr14:64487398-64487398|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2252990603447	2	393.223811	784.433069	0.99432	0.00039099	1.0577	0.00041593	2.0521	0.00080692	393.22530014578876	27.005	0.21993	27.267	27.14	27.36	0.26173					14	6	3	0	0	0	0.89176	1	11321	11321		0.79363	0	1	461150			8790	1130	4258	4280	10685	10685					0.032230220861038106
GVPASLGG	8	Unmodified	_GVPASLGG_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.0046264529228	2	329.181946	656.34934	-2.9892	-0.000984	2.0568	0.00067706	-0.93241	-0.00030693	329.18237787295607	17.02	0.37623	17.02	16.878	17.254	0					13	11	2	0	0	0	2.3239	1	7122	7122		0.79363	0	1	178920			8791	2233	4259	4281	10686	10686					0.007419107090640864
GVPASLGG	8	Unmodified	_GVPASLGG_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0047180056572	2	329.181946	656.34934	-0.27761	-9.1385E-05	3.0961	0.0010192	2.8185	0.0009278	329.18289725506713	17.135	0.2948	18.437	18.264	18.559	1.3023					14	9	2	0	0	0	2.3239	1	7049	7049		0.79363	0	1	1818800			8792	2233	4259	4281	10687	10687					0.007419107090640864
GVPASLGG	8	Unmodified	_GVPASLGG_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	329.181946	656.34934	-2.9264	-0.00096332	5.2849	0.0017397	2.3585	0.00077637	329.18335344610216	18.283	0.30381	18.283	18.188	18.492	0	-0.019029	0.00071579	NaN	0.79363	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1148900			8793	2233	4259	4281							0.007419107090640864
GVPASLGG	8	Unmodified	_GVPASLGG_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	329.181946	656.34934	-0.12761	-4.2007E-05	3.6776	0.0012106	3.55	0.0011686	329.1830725087391	18.045	0.30803	18.218	18.075	18.383	0.17285	-0.08393	-0.00034239	NaN	0.79363	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1397000			8794	2233	4259	4281							0.007419107090640864
GVPASLGG	8	Unmodified	_GVPASLGG_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	329.181946	656.34934	-0.78994	-0.00026003	4.8919	0.0016103	4.1019	0.0013503	329.1832829106567	17.372	0.30563	18.27	18.113	18.419	0.89794	-0.032339	0.00045704	NaN	0.79363	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1913300			8795	2233	4259	4281							0.007419107090640864
GVPCCRAGGV	10	Unmodified	_GVPCCRAGGV_					0	0	0			REV__ENST00000374902.8_1_9:103111637-103115189:-|nuORF	REV__ENST00000374902.8_1_9:103111637-103115189:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1732971072197	2	459.717847	917.421141	2.3592	0.0010846	-1.4244	-0.00065482	0.93483	0.00042976	459.7161529999094	68.659	0.18594	70.025	69.936	70.122	1.3657					6	5	2	0	0	0	0.12542	1	28850	28850		1.6526	0.85899	1	174800	+		8796	12707	4260	4282	10688	10688					-0.04087241200397784
GVPCCRAGGV	10	Unmodified	_GVPCCRAGGV_					0	0	0			REV__ENST00000374902.8_1_9:103111637-103115189:-|nuORF	REV__ENST00000374902.8_1_9:103111637-103115189:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	459.717847	917.421141	2.6401	0.0012137	-3.1233	-0.0014358	-0.48323	-0.00022215	459.71697677611996	68.063	0.15265	69.933	69.858	70.01	1.87	-0.045983	-0.00089161	NaN	1.6526	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389030	+		8797	12707	4260	4282							-0.04087241200397784
GVPDSCPV	8	Unmodified	_GVPDSCPV_					0	0	0		nc|ENSG00000160271|Q12967-6|RALGDS;ENSG00000160271|ENST00000372050|RALGDS;nc|ENSG00000160271|Q12967-2|RALGDS	nc|ENSG00000160271|Q12967-6|RALGDS	nc|ENSG00000160271|Q12967-6|RALGDS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	773.3522216677666	1	773.349816	772.34254	2.8072	0.002171	0.28567	0.00022092	3.0929	0.0023919	773.3500158042121	103.44	0.1024	103.63	103.56	103.66	0.18066					8	4	2	0	0	0	0.89008	1	43568	43568		2.5775	1.7838	1	21034000			8798	3551	4261	4283	10689	10689					-0.052737702338276904
GVPFGQRA	8	Unmodified	_GVPFGQRA_					0	0	0			REV__nc|ENSG00000100031|P19440-2|GGT1	REV__nc|ENSG00000100031|P19440-2|GGT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2283508181572	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.055	1	25.055	24.555	25.555	0								0	0	0	1.0178	1	10454	10454		2.5775	0	1		+		8799	8962	4262	4284	10690	10690					0.017883797573176707
GVPGEGVWLP	10	Unmodified	_GVPGEGVWLP_					0	0	0		ENST00000341255.3_1_22:44891951-44892347:-|nuORF	ENST00000341255.3_1_22:44891951-44892347:-|nuORF	ENST00000341255.3_1_22:44891951-44892347:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.7717468142509	2	505.768917	1009.52328	2.2026	0.001114	2.8274	0.00143	5.0301	0.002544	505.77070278449577	81.878	0.21403	81.878	81.701	81.915	0					10	6	2	0	0	0	0.87699	1	34085	34085		3.9444	1.0552	1	577390			8800	5933	4263	4285	10691	10691					0.018900714145274833
GVPGLQPARV	10	Unmodified	_GVPGLQPARV_					0	0	0		ENSG00000163501|ENST00000295731|IHH	ENSG00000163501|ENST00000295731|IHH	ENSG00000163501|ENST00000295731|IHH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.8670532107353	3	331.866181	992.576714	-0.026259	-8.7145E-06	2.5622	0.0008503	2.5359	0.00084159	331.86702663937666	22.802	0.37205	24.453	24.314	24.686	1.6511					24	11	3	0	0	0	0.846	1	9564	9564		3.8763	0	1	2262900			8801	3689	4264	4286	10692	10692					0.08012868917035121
GVPIPVFH	8	Unmodified	_GVPIPVFH_					0	0	0		ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	ENSG00000067704|ENST00000366922|IARS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	865.6345703005791	1	865.49305	864.485774	0.071896	6.2225E-05	0.30199	0.00026137	0.37388	0.00032359	865.4938554092007	14.62	0.11574	15.516	15.415	15.531	0.89664					5	4	2	0	0	0	0.89176	1	6055	6055		0.79363	0	1	398670			8802	825	4265	4287	10693	10693					0.048110249395676874
GVPKIPTA	8	Unmodified	_GVPKIPTA_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	782.4760009646416	1	782.477066	781.469789	1.8926	0.0014809	-2.6262	-0.0020549	-0.73356	-0.00057399	782.4744990972391	79.942	0.30803	79.942	79.733	80.041	0					13	9	2	0	0	0	0.89176	1	33295	33295		0.79363	0	1	402920			8803	1456	4266	4288	10694	10694					0.070313187026386
GVPKIPTA	8	Unmodified	_GVPKIPTA_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2848388552666	2	391.742171	781.469789	2.3204	0.00090901	-3.3031	-0.001294	-0.98266	-0.00038495	391.7405715212326	62.561	1.0135	63.974	63.552	64.566	1.4134					48	32	3	0	0	0	2.3239	1	26446	26446		0	0	1	2198100			8804	1456	4266	4288	10695	10695					0.070313187026386
GVPKIPTA	8	Unmodified	_GVPKIPTA_					0	0	0		ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	ENSG00000104324|ENST00000220763|CPQ	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	782.477066	781.469789	1.8001	0.0014085	-3.7246	-0.0029144	-1.9245	-0.0015059	782.4741024066144	79.686	0.31799	79.987	79.845	80.163	0.30047	0.022556	-0.00061542	NaN	0.79363	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	359050			8805	1456	4266	4288							0.070313187026386
GVPKPPAA	8	Unmodified	_GVPKPPAA_					0	0	0		nc|ENSG00000197283|Q96PV0-3|SYNGAP1;nc|ENSG00000197283|Q96PV0-2|SYNGAP1;nc|ENSG00000197283|Q96PV0-4|SYNGAP1;ENSG00000197283|ENST00000646630|SYNGAP1	nc|ENSG00000197283|Q96PV0-3|SYNGAP1	nc|ENSG00000197283|Q96PV0-3|SYNGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	736.4330932497978	1	736.435201	735.427924	2.1351	0.0015724	-2.9268	-0.0021554	-0.79168	-0.00058302	736.4328309221552	58.771	0.6423	58.771	58.331	58.974	0					39	19	3	0	0	0	0.89176	3	24451	24451;24501;24553		0.79363	0	1	3483700			8806	4993	4267	4289	10696;10697;10698	10696					0.04962763014123084
GVPKPPAA	8	Unmodified	_GVPKPPAA_					0	0	0		nc|ENSG00000197283|Q96PV0-3|SYNGAP1;nc|ENSG00000197283|Q96PV0-2|SYNGAP1;nc|ENSG00000197283|Q96PV0-4|SYNGAP1;ENSG00000197283|ENST00000646630|SYNGAP1	nc|ENSG00000197283|Q96PV0-3|SYNGAP1	nc|ENSG00000197283|Q96PV0-3|SYNGAP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	736.435201	735.427924	2.4454	0.0018008	-4.5419	-0.0033448	-2.0966	-0.001544	736.4316662552279	58.599	0.5922	58.925	58.527	59.119	0.32553	0.076859	-0.00066134	NaN	0.79363	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5101800			8807	4993	4267	4289							0.04962763014123084
GVPPGGKP	8	Unmodified	_GVPPGGKP_					0	0	0		nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB;TNXB|p.G3000Vfs*44|1|0.13|ENSG00000168477|chr6:32052786-32052787|-/A|frameshift_variant;TNXB|p.R1926Pfs*15|1|0.16|ENSG00000168477|chr6:32068926-32068947|TCATTCCGGTCACCTCCTATGC/-|frameshift_variant	nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0695373415947	2	354.705589	707.396624	0.021338	7.5686E-06	-0.65783	-0.00023334	-0.6365	-0.00022577	354.7053385952702	15.44	0.18828	15.57	15.462	15.65	0.13022					7	5	2	0	0	0	2.3239	1	6371	6371		0.79363	0	1	229020			8808	4036	4268	4290	10699	10699					0.031221899800357278
GVPPPAFEWYK	11	Unmodified	_GVPPPAFEWYK_					0	0	0		nc|ENSG00000172260|Q7Z3B1-2|NEGR1;ENSG00000172260|ENST00000357731|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7963	1	9.7963	9.2963	10.296	0								0	0	0	0.63775	1	4034	4034		0.45452	0	1				8809	4233	4269	4291	10700	10700					0.011222740571838585
GVPPPAFEWYK	11	Unmodified	_GVPPPAFEWYK_					0	0	0		nc|ENSG00000172260|Q7Z3B1-2|NEGR1;ENSG00000172260|ENST00000357731|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883544802666	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.095	1	10.095	9.5947	10.595	0								0	0	0	0.63775	1	4160	4160		1.3296	0	1				8810	4233	4269	4291	10701	10701					0.011222740571838585
GVPPPAFEWYK	11	Unmodified	_GVPPPAFEWYK_					0	0	0		nc|ENSG00000172260|Q7Z3B1-2|NEGR1;ENSG00000172260|ENST00000357731|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883849978447	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.228	1	10.228	9.7276	10.728	0								0	0	0	0.63775	1	4216	4216		1.3296	0	1				8811	4233	4269	4291	10702	10702					0.011222740571838585
GVPPPAFEWYK	11	Unmodified	_GVPPPAFEWYK_					0	0	0		nc|ENSG00000172260|Q7Z3B1-2|NEGR1;ENSG00000172260|ENST00000357731|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.137	1	21.137	20.637	21.637	0								0	0	0	0.63775	1	8788	8788		0.45452	0	1				8812	4233	4269	4291	10703	10703					0.011222740571838585
GVPPPAFEWYK	11	Unmodified	_GVPPPAFEWYK_					0	0	0		nc|ENSG00000172260|Q7Z3B1-2|NEGR1;ENSG00000172260|ENST00000357731|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	nc|ENSG00000172260|Q7Z3B1-2|NEGR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8878051638603	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.539	1	28.286	27.786	28.786	1.747								0	0	0	0.63775	1	11102	11102		0.50596	0.34663	1				8813	4233	4269	4291	10704	10704					0.011222740571838585
GVPSTKLQ	8	Unmodified	_GVPSTKLQ_					0	0	0		chr14:53750100-53768801|247|12.29|0.0|20.23|-|0|LINC02331,LINC02331|1	chr14:53750100-53768801|247|12.29|0.0|20.23|-|0|LINC02331,LINC02331|1	chr14:53750100-53768801|247|12.29|0.0|20.23|-|0|LINC02331,LINC02331|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2415038943291	2	415.242535	828.470518	0.47144	0.00019576	-3.1546	-0.0013099	-2.6831	-0.0011141	415.24112892526693	70.132	0.40575	70.132	69.897	70.303	0					32	12	3	0	0	0	0.89008	1	29205	29205		2.5775	0	1	7687400			8814	202	4270	4292	10705	10705					0.04942113351694388
GVPSWSLYQI	10	Unmodified	_GVPSWSLYQI_					0	0	0			REV__FAP|p.C154S|1|0.05|ENSG00000078098|chr2:162219878-162219878|C/G|missense_variant	REV__FAP|p.C154S|1|0.05|ENSG00000078098|chr2:162219878-162219878|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.3028442263603	2	575.300581	1148.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.549	1	38.858	38.358	39.358	0.30857								0	0	0	0.66166	1	16218	16218		1.6526	0.17072	1		+		8815	14159	4271	4293	10706	10706					0.018260121317553057
GVPTALMFL	9	Unmodified	_GVPTALMFL_					0	0	0		ENST00000449943.5_1_11:64897669-64899838:-|nuORF	ENST00000449943.5_1_11:64897669-64899838:-|nuORF	ENST00000449943.5_1_11:64897669-64899838:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.5295287966728	1	948.522301	947.515025	2.5347	0.0024043	1.9558	0.0018551	4.4906	0.0042594	948.5248196512671	84.448	0.54577	84.709	84.437	84.983	0.26083					28	16	2	0	0	0	0.22519	1	35326	35326		30.225	1.738	1	876750			8816	6602	4272	4294	10707	10707					0.039168011735455366
GVPTKLGP	8	Unmodified	_GVPTKLGP_					0	0	0			REV__nc|ENSG00000018189|Q7L099|RUFY3	REV__nc|ENSG00000018189|Q7L099|RUFY3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1532165408134	2	384.734346	767.454139	0.47592	0.0001831	0.11423	4.395E-05	0.59015	0.00022705	384.7360901195717	22.679	0.52104	23.894	23.828	24.349	1.2145					18	16	2	0	0	0	2.3239	1	9498	9498		2.5775	1.7838	1	341150	+		8817	8549	4273	4295	10708	10708					0.0611103218561766
GVPVGFCR	8	Unmodified	_GVPVGFCR_					0	0	0			REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	417.2395507693291	2	417.718173	833.421793	1.8141	0.00075776	-0.67892	-0.0002836	1.1351	0.00047417	417.717894216646	69.15	0.26363	70.516	70.381	70.645	1.3657					13	8	2	0	0	0	2.3239	1	29071	29071		0.69038	0	1	988550	+		8818	12122	4274	4296	10709	10709					-0.0015807848903932609
GVPVGFCR	8	Unmodified	_GVPVGFCR_					0	0	0			REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	417.718173	833.421793	0.54127	0.0002261	0.64403	0.00026902	1.1853	0.00049512	417.7183684291674	70.114	0.34317	70.114	69.929	70.272	0	-0.19676	0.00037433	NaN	0.69038	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503420	+		8819	12122	4274	4296							-0.0015807848903932609
GVPVGFCR	8	Unmodified	_GVPVGFCR_					0	0	0			REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	REV__ENST00000240185.7_1_1:11072733-11073789:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	417.718173	833.421793	1.5088	0.00063024	0.38273	0.00015987	1.8915	0.00079011	417.7184468077978	69.981	0.28138	70.304	70.192	70.474	0.32224	-0.0075323	0.00015603	NaN	0.69038	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	792100	+		8820	12122	4274	4296							-0.0015807848903932609
GVPWHRLLLPR	11	Unmodified	_GVPWHRLLLPR_					0	0	0			REV__ENST00000565396.5_1_16:2052722-2053019:-|nuORF	REV__ENST00000565396.5_1_16:2052722-2053019:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4099609255791	2	672.406581	1342.79861	2.2311	0.0015002	2.7272	0.0018338	4.9582	0.0033339	672.4084396282121	81.377	1.4672	81.377	80.478	81.946	0					66	47	2	0	0	0	1.039	1	33736	33736		1.3295	1.0605	1	2220000	+		8821	13933	4275	4297	10710	10710					0.14092148333202204
GVPWHRLLLPR	11	Unmodified	_GVPWHRLLLPR_					0	0	0			REV__ENST00000565396.5_1_16:2052722-2053019:-|nuORF	REV__ENST00000565396.5_1_16:2052722-2053019:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4100219607353	2	672.406581	1342.79861	1.9383	0.0013033	3.3614	0.0022602	5.2997	0.0035635	672.408867948159	81.206	1.355	81.497	80.561	81.916	0.29056					107	43	3	0	0	0	1.0388	1	33842	33842		0.35063	0.081612	1	2380900	+		8822	13933	4275	4297	10711	10711					0.14092148333202204
GVPYLAPVAP	10	Unmodified	_GVPYLAPVAP_					0	0	0		tr|A0A553SGF6|A0A553SGF6_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_10800PE=3SV=1	tr|A0A553SGF6|A0A553SGF6_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_10800PE=3SV=1	tr|A0A553SGF6|A0A553SGF6_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_10800PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2856017947197	2	492.28166	982.548768	3.1733	0.0015622	2.856	0.001406	6.0294	0.0029682	492.28222079979395	74.177	0.31737	74.502	74.296	74.614	0.32494					13	9	2	0	0	0	0.89646	1	30999	30999		1.8442	0.19162	1	418120			8823	16107	4276	4298	10712	10712					0.05679545936948216
GVQELTHCPDT	11	Unmodified	_GVQELTHCPDT_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000310331.2_1_5:139927339-139928819:+|nuORF	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	400.0457946658134	3	400.516889	1198.52884	0.9661	0.00038694	-2.0932	-0.00083835	-1.1271	-0.00045141	400.5170386800681	25.325	0.30782	25.577	25.397	25.705	0.25197					11	9	2	0	0	0	0.14606	1	10585	10585		0.094841	0	1	165820			8824	7871	4277	4299	10713	10713					-0.06248617855999328
GVQGRRAL	8	Unmodified	_GVQGRRAL_					0	0	0			REV__ENST00000462875.1_1_6:31609004-31609235:-|nuORF	REV__ENST00000462875.1_1_6:31609004-31609235:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	856.5175659060478	1	856.51116	855.503883	2.0818	0.0017831	-0.54657	-0.00046814	1.5353	0.001315	856.5115983265381	81.35	0.3008	81.64	81.462	81.763	0.29056					14	9	2	0	0	0	0.89176	1	33990	33990		0.79363	0	1	696750	+		8825	13211	4278	4300	10714	10714					0.07035159914255473
GVQKFIKVFH	10	Unmodified	_GVQKFIKVFH_					0	0	0			REV__tr|A0A553SIL1|A0A553SIL1_NIACIGlycosyltransferasefamily4proteinOS=NialliacirculansOX=1397GN=CEQ21_15050PE=4SV=1	REV__tr|A0A553SIL1|A0A553SIL1_NIACIGlycosyltransferasefamily4proteinOS=NialliacirculansOX=1397GN=CEQ21_15050PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1809570193291	3	401.572998	1201.69716	2.7389	0.0010999	3.5979	0.0014448	6.3368	0.0025447	401.5744959806117	90.331	0.4005	90.541	90.34	90.74	0.20904					22	12	2	0	0	0	0.12559	1	37919	37919		0.15932	0	1	2328900	+		8826	14854	4279	4301	10715	10715					0.10438276910645072
GVQLQHRD	8	Unmodified	_GVQLQHRD_					0	0	0		ENST00000555626.5_1_14:96969281-96986468:+|nuORF	ENST00000555626.5_1_14:96969281-96986468:+|nuORF	ENST00000555626.5_1_14:96969281-96986468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1992980837822	2	476.75159	951.488627	2.4882	0.0011862	4.3076	0.0020536	6.7957	0.0032399	476.7538140230126	82.009	0.36315	82.009	81.763	82.127	0					16	11	2	0	0	0	2.3239	1	34202	34202		0	0	1	782530			8827	7297	4280	4302	10716	10716					0.01094248326410252
GVQLQHRD	8	Unmodified	_GVQLQHRD_					0	0	0		ENST00000555626.5_1_14:96969281-96986468:+|nuORF	ENST00000555626.5_1_14:96969281-96986468:+|nuORF	ENST00000555626.5_1_14:96969281-96986468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1999084353447	2	476.75159	951.488627	3.0913	0.0014738	2.5442	0.0012129	5.6355	0.0026867	476.75334755236264	83.107	0.43175	83.377	83.183	83.615	0.27029					21	13	2	0	0	0	2.3239	1	34787	34787		0.6015	0.14316	1	463340			8828	7297	4280	4302	10717	10717					0.01094248326410252
GVQLWRLLV	9	Unmodified	_GVQLWRLLV_					0	0	0		ENST00000370081.6_1_6:75950925-75953508:-|nuORF	ENST00000370081.6_1_6:75950925-75953508:-|nuORF	ENST00000370081.6_1_6:75950925-75953508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	541.8171874880791	2	542.337301	1082.66005	3.2991	0.0017892	-2.5687	-0.0013931	0.73042	0.00039613	542.3359239342411	93.094	0.35051	94.371	94.197	94.548	1.277					14	10	2	0	0	0	0.11898	1	39109	39109		2.3027	0.4585	1	773450			8829	6107	4281	4303	10718	10718					0.12202605364882402
GVQPIRQKQY	10	Unmodified	_GVQPIRQKQY_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|181|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|181|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|181|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8468505740166	2	608.843479	1215.67241	4.6572	0.0028355	0.048944	2.9799E-05	4.7061	0.0028653	608.8440137465943	87.97	0.31947	89.416	89.253	89.572	1.4467					19	9	3	0	0	0	0.89803	1	37090	37090		1.6526	0.32309	1	1823300			8830	7619	4282	4304	10719	10719					0.073195970372808
GVQRGVQRR	9	Unmodified	_GVQRGVQRR_					0	0	0		ENST00000248846.9_2_22:50664617-50678653:-|nuORF	ENST00000248846.9_2_22:50664617-50678653:-|nuORF	ENST00000248846.9_2_22:50664617-50678653:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	527.9170410037041	2	528.312681	1054.61081	1.898	0.0010028	-0.42523	-0.00022466	1.4728	0.0007781	528.3120084628388	42.974	0.23866	42.974	42.819	43.057	0					13	7	2	0	0	0	0.11684	1	17921	17921		4.3292	2.485	1	536370			8831	5579	4283	4305	10720	10720					0.08568710128656676
GVQRSSTS	8	Unmodified	_GVQRSSTS_					0	0	0			REV__nc|ENSG00000146776|Q9ULK2-3|ATXN7L1	REV__nc|ENSG00000146776|Q9ULK2-3|ATXN7L1	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2097045779228	2	411.209224	820.403895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.907	1	19.355	18.855	19.855	1.448								0	0	0	1.0178	1	7441	7441		2.3027	0	1		+		8832	10312	4284	4306	10721	10721					-0.013491222101833955
GVQTLLGV	8	Unmodified	_GVQTLLGV_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;ENST00000478415.1_1_X:79999455-80064970:-|nuORF;BRWD3|p.I344Ffs*2|1|0.42|ENSG00000165288|chrX:80734162-80734175|CCAAATAATATATT/-|frameshift_variant	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.7401000857353	2	393.739628	785.464704	0.71971	0.00028338	0.2268	8.9299E-05	0.94651	0.00037268	393.7397953432122	56.678	0.26749	58.646	58.425	58.693	1.9684					16	8	2	0	0	0	0.59872	2	23766	23714;23766		40.449	2.2974	1	8616500			8833	3829	4285	4307	10722;10723	10723					0.0633901484004582
GVRAALEAL	9	Unmodified	_GVRAALEAL_					0	0	0		ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2703430056572	2	450.269084	898.523616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.495	1	55.9	55.4	56.4	1.4048								0	0	0	0.42693	1	22808	22808		4.756	0	1				8834	4664	4286	4308	10724	10724					0.07029491134358068
GVRAAWRRLPQ	11	Unmodified	_GVRAAWRRLPQ_					0	0	0		ENSG00000108622|ENST00000579788|ICAM2	ENSG00000108622|ENST00000579788|ICAM2	ENSG00000108622|ENST00000579788|ICAM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2580444216728	3	437.258184	1308.75272	0.94288	0.00041228	-2.7294	-0.0011934	-1.7865	-0.00078116	437.25770357346516	33.506	0.31079	33.506	33.296	33.607	0					21	9	3	0	0	0	1.0362	1	14033	14033		1.3296	0.31607	1	850800			8835	1641	4287	4309	10725	10725					0.11069503150952187
GVRAHLYD	8	Unmodified	_GVRAHLYD_					0	0	0		ENST00000478380.5_1_9:286487-312499:+|nuORF	ENST00000478380.5_1_9:286487-312499:+|nuORF	ENST00000478380.5_1_9:286487-312499:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.4869262576103	1	930.479191	929.471915	3.1999	0.0029774	2.2724	0.0021144	5.4723	0.0050918	930.4818846989785	85.064	0.70243	86.66	86.431	87.133	1.5962					63	28	3	0	0	0	0.89008	1	35791	35791		2.5775	0.51773	1	23483000			8836	6802	4288	4310	10726	10726					0.004357474404628192
GVRARHQR	8	Unmodified	_GVRARHQR_					0	0	0		ENST00000378024.8_2_11:62300900-62300945:-|nuORF	ENST00000378024.8_2_11:62300900-62300945:-|nuORF	ENST00000378024.8_2_11:62300900-62300945:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2873107790947	2	490.286466	978.558379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.544	1	40.861	40.361	41.361	0.31683								0	0	0	1.0178	1	17044	17044		0.79363	0	1				8837	6202	4289	4311	10727	10727					0.06824171785694944
GVRCKGLP	8	Unmodified	_GVRCKGLP_					0	0	0		ENST00000371273.3_1_1:55279632-55307494:+|nuORF;ENST00000358193.7_1_1:55280606-55307494:+|nuORF	ENST00000371273.3_1_1:55279632-55307494:+|nuORF	ENST00000371273.3_1_1:55279632-55307494:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	414.7619201540947	2	415.239273	828.463992	1.3158	0.00054636	1.0148	0.0004214	2.3306	0.00096776	415.2397560929194	68.813	0.4208	70.666	70.527	70.948	1.853					29	13	3	0	0	0	2.3239	1	28849	28849		2.5775	0	1	5088500			8838	6008	4290	4312	10728	10728					0.04289896919351577
GVREEFLTK	9	Unmodified	_GVREEFLTK_					0	0	0			REV__tr|A0A553SN95|A0A553SN95_NIACIErythromycinesterasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_23950PE=4SV=1	REV__tr|A0A553SN95|A0A553SN95_NIACIErythromycinesterasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_23950PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2004272341728	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.622	1	13.316	12.816	13.816	0.69396								0	0	0	0.42693	1	5242	5242		0.86438	0.40604	1		+		8839	15048	4291	4313	10729	10729					0.046171279889904326
GVREHEMER	9	Unmodified	_GVREHEMER_					0	0	0		PHOSPHO2|p.K66E|1|0.15|ENSG00000144362|chr2:169701167-169701167|A/G|missense_variant	PHOSPHO2|p.K66E|1|0.15|ENSG00000144362|chr2:169701167-169701167|A/G|missense_variant	PHOSPHO2|p.K66E|1|0.15|ENSG00000144362|chr2:169701167-169701167|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.7726318240166	2	571.772197	1141.52984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.35	1	73.35	72.85	73.85	0								0	0	0	0.42693	1	30539	30539		2.0598	0	1				8840	8052	4292	4314	10730	10730					-0.03526358696421994
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1346923708916	3	311.539517	931.596721	-3.4134	-0.0010634	4.1948	0.0013068	0.78134	0.00024342	311.5411437831364	14.92	0.37177	14.92	14.689	15.061	0					14	11	2	0	0	0	2.3239	1	6116	6116		0.45834	0.45834	1	335340			8841	4791	4293	4315	10731	10731					0.12818664647659261
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1345397830009	3	311.539517	931.596721	-0.32683	-0.00010182	1.1872	0.00036985	0.86033	0.00026803	311.53997176010307	15.921	0.46406	16.052	15.839	16.303	0.13022					32	14	3	0	0	0	2.3239	1	6710	6710		0	0	1	776340			8842	4791	4293	4315	10732	10732					0.12818664647659261
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1344482302666	3	311.539517	931.596721	-1.225	-0.00038165	0.29157	9.0836E-05	-0.93346	-0.00029081	311.53967386845056	14.19	0.50282	14.959	14.639	15.142	0.76937					42	20	3	0	0	0	2.3239	1	5796	5796		0.45834	0.45834	1	1944400			8843	4791	4293	4315	10733	10733					0.12818664647659261
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1342040896416	3	311.539517	931.596721	-1.064	-0.00033149	2.0377	0.00063481	0.97361	0.00030332	311.5401157243062	15.325	0.40186	16.152	15.951	16.353	0.82643					35	12	4	0	0	0	2.3239	1	6398	6398		0	0	1	4308100			8844	4791	4293	4315	10734	10734					0.12818664647659261
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1345397830009	3	311.539517	931.596721	-0.50915	-0.00015862	0.48405	0.0001508	-0.025098	-7.8189E-06	311.53957297552245	14.111	0.56148	14.987	14.626	15.188	0.87539					56	24	3	0	0	0	2.3239	1	5723	5723		0.40072	0.40072	1	2280400			8845	4791	4293	4315	10735	10735					0.12818664647659261
GVRFKVVK	8	Unmodified	_GVRFKVVK_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1340820193291	3	311.539517	931.596721	-0.46174	-0.00014385	1.523	0.00047447	1.0612	0.00033062	311.53990655576195	15.246	0.41601	16.143	15.93	16.346	0.89665					40	13	4	0	0	0	2.3239	1	6257	6257		0	0	1	5490000			8846	4791	4293	4315	10736	10736					0.12818664647659261
GVRGEMPY	8	Unmodified	_GVRGEMPY_					0	0	0		ENST00000372518.4_1_20:44519377-44519782:-|nuORF	ENST00000372518.4_1_20:44519377-44519782:-|nuORF	ENST00000372518.4_1_20:44519377-44519782:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.7182800173759	2	454.71837	907.422187	2.8708	0.0013054	-1.6796	-0.00076374	1.1913	0.00054169	454.71696579769304	71.977	0.48639	73.801	73.57	74.056	1.824					38	15	3	0	0	0	0.89008	1	30260	30260		2.5775	0	1	6282300			8847	6140	4294	4316	10737	10737					-0.035227035598495604
GVRGPHFL	8	Unmodified	_GVRGPHFL_					0	0	0		nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	441.2166931033134	2	441.750862	881.487171	1.249	0.00055177	-2.3695	-0.0010467	-1.1205	-0.00049498	441.74968774526167	70.44	0.57028	70.44	70.272	70.842	0					29	18	2	0	0	0	2.3239	1	29303	29303		2.8892	0.31174	1	961760			8848	7831	4295	4317	10738	10738					0.04168659028323418
GVRGRRLP	8	Unmodified	_GVRGRRLP_					0	0	0		ENST00000442329.6_1_2:179387905-179388028:+|nuORF	ENST00000442329.6_1_2:179387905-179388028:+|nuORF	ENST00000442329.6_1_2:179387905-179388028:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7869750857353	2	455.78831	909.562067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.403	1	30.685	30.185	31.185	1.2825								0	0	0	1.0178	1	12335	12335		0.79363	0	1				8849	6564	4296	4318	10739	10739					0.10366841559539353
GVRGSGSG	8	Unmodified	_GVRGSGSG_					0	0	0		ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	676.3371459841728	1	676.337278	675.330001	2.0494	0.0013861	0.11909	8.0547E-05	2.1685	0.0014667	676.3371499843572	77.022	0.56504	77.022	76.719	77.284	0					31	17	2	0	0	0	0.87276	3	31996	31996;32045;32094		13.508	0	1	1074800			8850	6534	4297	4319	10740;10741;10742	10740					-0.020650455818554292
GVRGSGSG	8	Unmodified	_GVRGSGSG_					0	0	0		ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	676.3389770388603	1	676.337278	675.330001	2.065	0.0013967	0.34127	0.00023081	2.4063	0.0016275	676.3374549679082	76.756	0.6319	77.072	76.786	77.418	0.31653					36	19	2	0	0	0	0.87276	4	32048	32048;32098;32150;32193		13.508	0	1	1575200			8851	6534	4297	4319	10743;10744;10745;10746	10743					-0.020650455818554292
GVRGSGSG	8	Unmodified	_GVRGSGSG_					0	0	0		ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	676.3385497927666	1	676.337278	675.330001	2.2073	0.0014928	-0.402	-0.00027188	1.8053	0.001221	676.3372775765476	76.005	0.91266	77.298	76.787	77.699	1.2938					93	29	4	0	0	0	0.87276	6	31764	31764;31811;31852;31902;31954;32015		13.508	0	1	26511000			8852	6534	4297	4319	10747;10748;10749;10750;10751;10752	10747					-0.020650455818554292
GVRGSGSG	8	Unmodified	_GVRGSGSG_					0	0	0		ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	676.3383666872978	1	676.337278	675.330001	2.3482	0.0015882	-1.2	-0.00081162	1.1482	0.00077656	676.3366948317081	75.559	0.82031	77.341	76.945	77.765	1.7817					86	26	4	0	0	0	0.87276	7	31592	31592;31641;31679;31719;31770;31809;31858		13.508	0	1	28909000			8853	6534	4297	4319	10753;10754;10755;10756;10757;10758;10759	10753					-0.020650455818554292
GVRGSGSG	8	Unmodified	_GVRGSGSG_					0	0	0		ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	ENST00000436944.5_1_7:73098152-73100976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.6729003787041	2	338.672277	675.330001	2.2239	0.00075317	-1.7537	-0.00059392	0.47021	0.00015925	338.67184024308284	75.461	1.1633	77.243	76.854	78.017	1.7817					112	37	5	0	0	0	0.88055	5	31627	31627;31666;31705;31757;31815		8.5933	0	1	45175000			8854	6534	4297	4319	10760;10761;10762;10763;10764	10760					-0.020650455818554292
GVRHAWIL	8	Unmodified	_GVRHAWIL_					0	0	0			REV__ENST00000342085.8_1_16:2648895-2649351:+|nuORF	REV__ENST00000342085.8_1_16:2648895-2649351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1995727419853	2	476.279786	950.54502	1.4436	0.00068755	4.4207	0.0021055	5.8643	0.0027931	476.2818579039441	79.836	0.40451	81.552	81.413	81.817	1.7167					19	12	2	0	0	0	2.3239	1	33474	33474		0.79363	0	1	592310	+		8855	12500	4298	4320	10765	10765					0.06776920953745957
GVRITLEDDH	10	Unmodified	_GVRITLEDDH_					0	0	0			REV__ENSG00000198087|ENST00000359314|CD2AP	REV__ENSG00000198087|ENST00000359314|CD2AP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1528503298759	3	385.531527	1153.57275	0.21029	8.1075E-05	0.061874	2.3854E-05	0.27217	0.00010493	385.5319176149737	20.63	0.14437	22.205	22.119	22.263	1.5748					6	4	2	0	0	0	0.12559	1	8583	8583		0.15932	0	1	223070	+		8856	11701	4299	4321	10766	10766					0.002107346326283732
GVRKPDTWV	9	Unmodified	_GVRKPDTWV_					0	0	0		ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	ENST00000527370.5_1_11:67264693-67266053:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2946655154228	2	529.293091	1056.57163	4.4171	0.0023379	-0.58797	-0.00031121	3.8291	0.0020267	529.2929826998064	89.971	0.53304	91.375	91.019	91.552	1.4045					27	16	2	0	0	0	0.84963	1	37838	37838		0.6015	0	1	621980			8857	7135	4300	4322	10767	10767					0.045605650544075615
GVRKRHRK	8	Unmodified	_GVRKRHRK_					0	0	0		ENST00000487064.1_1_19:33832314-33832719:+|nuORF	ENST00000487064.1_1_19:33832314-33832719:+|nuORF	ENST00000487064.1_1_19:33832314-33832719:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1415283083916	2	518.833583	1035.65261	4.318	0.0022403	0.90138	0.00046767	5.2194	0.002708	518.8348072385571	91.018	0.44793	92	91.717	92.165	0.98157					24	13	3	0	0	0	2.3239	1	38253	38253		0.79363	0.10326	1	757860			8858	6874	4301	4323	10768	10768					0.13621310607823034
GVRKWTRW	8	Unmodified	_GVRKWTRW_					0	0	0		ENST00000343979.5_1_19:12273950-12296624:+|nuORF	ENST00000343979.5_1_19:12273950-12296624:+|nuORF	ENST00000343979.5_1_19:12273950-12296624:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2534667849541	3	363.54192	1087.60393	0.61799	0.00022466	0.3609	0.0001312	0.97889	0.00035587	363.5420304728703	24.958	0.37103	25.21	24.934	25.305	0.25197					19	11	2	0	0	0	2.3239	1	10430	10430		0	0	1	256740			8859	5953	4302	4324	10769	10769					0.06363397248082947
GVRLARLPRSS	11	Unmodified	_GVRLARLPRSS_					0	0	0		ENSG00000047056|ENST00000263150|WDR37;nc|ENSG00000047056|Q9Y2I8-2|WDR37	ENSG00000047056|ENST00000263150|WDR37	ENSG00000047056|ENST00000263150|WDR37	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3693115115166	2	606.370195	1210.72584	3.4442	0.0020885	-1.9755	-0.0011979	1.4687	0.00089055	606.3687378305891	73.878	1.2105	75.196	74.558	75.768	1.318					93	38	3	0	0	0	1.0131	1	31000	31000		2.9952	0.93549	1	2218100			8860	675	4303	4325	10770	10770					0.12890394539772387
GVRLFILFIAL	11	Unmodified	_GVRLFILFIAL_					0	0	0			REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4058105349541	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.57	1	112.62	112.12	113.12	0.04554								0	0	0	0.63775	1	48514	48514		0.35063	0	1		+		8861	15450	4304	4326	10771	10771					0.17584880155686733
GVRLFILFIAL	11	Unmodified	_GVRLFILFIAL_					0	0	0			REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4071533083916	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.03	1	113.07	112.57	113.57	0.044189								0	0	0	0.63775	1	48694	48694		0.35063	0	1		+		8862	15450	4304	4326	10772	10772					0.17584880155686733
GVRLFILFIAL	11	Unmodified	_GVRLFILFIAL_					0	0	0			REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4066650271416	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.45	1	113.49	112.99	113.99	0.044189								0	0	0	0.63775	1	48863	48863		0.35063	0	1		+		8863	15450	4304	4326	10773	10773					0.17584880155686733
GVRLFILFIAL	11	Unmodified	_GVRLFILFIAL_					0	0	0			REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4072753787041	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.8	1	113.85	113.35	114.35	0.044189								0	0	0	0.63775	1	49006	49006		0.35063	0	1		+		8864	15450	4304	4326	10774	10774					0.17584880155686733
GVRLFILFIAL	11	Unmodified	_GVRLFILFIAL_					0	0	0			REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	REV__tr|A0A7D6VSJ2|A0A7D6VSJ2_9CLOTFlagellarbiosyntheticproteinFlhBOS=ClostridiumintestinaleOX=36845GN=flhBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4063598513603	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.93	1	113.97	113.47	114.47	0.044189								0	0	0	0.63775	1	49057	49057		0.35063	0	1		+		8865	15450	4304	4326	10775	10775					0.17584880155686733
GVRLFRQSKS	10	Unmodified	_GVRLFRQSKS_					0	0	0			REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3444702029228	2	589.343646	1176.67274	2.6941	0.0015878	-1.0088	-0.00059453	1.6853	0.00099323	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.89803	1	32102	32102		1.4819	0	1	8587800	+		8866	10484	4305	4327	10776	10776					0.09147016757128767
GVRLIWELCDS	11	Unmodified	_GVRLIWELCDS_					0	0	0			REV__ENSG00000177721|ENST00000616064|ANXA2R	REV__ENSG00000177721|ENST00000616064|ANXA2R	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8891784548759	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.252	1	41.252	40.752	41.752	0								0	0	0	0.63775	1	17275	17275		0.45452	0.29519	1		+		8867	11224	4306	4328	10777	10777					0.010571113458127002
GVRLIWELCDS	11	Unmodified	_GVRLIWELCDS_					0	0	0			REV__ENSG00000177721|ENST00000616064|ANXA2R	REV__ENSG00000177721|ENST00000616064|ANXA2R	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8892089724541	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.277	1	32.571	32.071	33.071	0.29431								0	0	0	0.63775	1	13546	13546		0.45452	0	1		+		8868	11224	4306	4328	10778	10778					0.010571113458127002
GVRLIWELCDS	11	Unmodified	_GVRLIWELCDS_					0	0	0			REV__ENSG00000177721|ENST00000616064|ANXA2R	REV__ENSG00000177721|ENST00000616064|ANXA2R	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.994	1	39.278	38.778	39.778	1.284								0	0	0	0.63775	1	15946	15946		0.45452	0.087843	1		+		8869	11224	4306	4328	10779	10779					0.010571113458127002
GVRLIWELCDS	11	Unmodified	_GVRLIWELCDS_					0	0	0			REV__ENSG00000177721|ENST00000616064|ANXA2R	REV__ENSG00000177721|ENST00000616064|ANXA2R	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8894225955009	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.425	1	32.24	31.74	32.74	1.8151								0	0	0	0.63775	1	12754	12754		0.45452	0.1855	1		+		8870	11224	4306	4328	10780	10780					0.010571113458127002
GVRLIWELCDS	11	Unmodified	_GVRLIWELCDS_					0	0	0			REV__ENSG00000177721|ENST00000616064|ANXA2R	REV__ENSG00000177721|ENST00000616064|ANXA2R	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882018923759	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.535	1	37.352	36.852	37.852	1.8176								0	0	0	0.63775	1	14902	14902		0.45452	0.29519	1		+		8871	11224	4306	4328	10781	10781					0.010571113458127002
GVRLKAFL	8	Unmodified	_GVRLKAFL_					0	0	0		ENST00000398733.7_1_5:139006611-139006695:+|nuORF	ENST00000398733.7_1_5:139006611-139006695:+|nuORF	ENST00000398733.7_1_5:139006611-139006695:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2906066775322	2	452.292362	902.570172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.407	1	59.825	59.325	60.325	1.4181								0	0	0	1.0178	1	24489	24489		0.79363	0	1				8872	6328	4307	4329	10782	10782					0.11498975756308027
GVRLKRPIK	9	Unmodified	_GVRLKRPIK_					0	0	0		ENSG00000145723|ENST00000399004|GIN1	ENSG00000145723|ENST00000399004|GIN1	ENSG00000145723|ENST00000399004|GIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1066.718798816204	1	1066.72076	1065.71348	2.6729	0.0028512	-4.0909	-0.0043639	-1.4181	-0.0015127	1066.7167127338769	39.008	0.092564	40.304	40.258	40.35	1.2961					4	2	2	0	0	0	0.85206	1	16377	16377		0.6015	0	1	1180500			8873	3120	4308	4330	10783	10783					0.1832540286739004
GVRLLFSVVS	10	Unmodified	_GVRLLFSVVS_					0	0	0			REV__nc|ENSG00000077150|Q00653-4|NFKB2	REV__nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8272582888603	2	538.826766	1075.63898	2.7236	0.0014676	-2.7017	-0.0014558	0.021898	1.1799E-05	538.8253751971384	94.007	0.47564	94.152	93.942	94.417	0.14493					33	14	3	0	0	0	0.89803	1	39421	39421		1.6526	1.0511	1	1794400	+		8874	8776	4309	4331	10784	10784					0.1041859526535518
GVRNIKSMWEK	11	Unmodified	_GVRNIKSMWEK_					0	0	0		ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-6|CALD1;nc|ENSG00000122786|Q05682-2|CALD1;ENSG00000122786|ENST00000361675|CALD1	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9120361208916	3	449.911573	1346.71289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.006	1	15.775	15.275	16.275	0.76937								0	0	0	0.63775	1	6236	6236		1.3296	0	1				8875	2169	4310	4332	10785	10785					0.053401953653747114
GVRNIKSMWEK	11	Unmodified	_GVRNIKSMWEK_					0	0	0		ENST00000482470.5_1_7:134552484-134644871:+|nuORF;nc|ENSG00000122786|Q05682-5|CALD1;nc|ENSG00000122786|Q05682-4|CALD1;nc|ENSG00000122786|Q05682-3|CALD1;nc|ENSG00000122786|Q05682-6|CALD1;nc|ENSG00000122786|Q05682-2|CALD1;ENSG00000122786|ENST00000361675|CALD1	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	ENST00000482470.5_1_7:134552484-134644871:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9110290408134	3	449.911573	1346.71289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.163	1	15.06	14.56	15.56	0.89664								0	0	0	0.63775	1	5874	5874		0.45452	0	1				8876	2169	4310	4332	10786	10786					0.053401953653747114
GVRNNETK	8	Unmodified	_GVRNNETK_					0	0	0		tr|A0A7D6ZX31|A0A7D6ZX31_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20530PE=4SV=1	tr|A0A7D6ZX31|A0A7D6ZX31_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20530PE=4SV=1	tr|A0A7D6ZX31|A0A7D6ZX31_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20530PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1728393435478	2	459.243598	916.472643	1.8817	0.00086414	-3.8768	-0.0017804	-1.9951	-0.00091623	459.2418158574216	72.795	0.12582	72.795	72.715	72.84	0					5	3	2	0	0	0	2.3239	1	30279	30279		0.69038	0	1	342820			8877	17184	4311	4333	10787	10787					0.011065420895079114
GVRPKIIRI	9	Unmodified	_GVRPKIIRI_					0	0	0			REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2432739138603	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.806	1	18.978	18.478	19.478	0.17285								0	0	0	0.42693	1	7807	7807		0.26902	0.033176	1		+		8878	15415	4312	4334	10788	10788					0.1792600049311659
GVRPKIIRI	9	Unmodified	_GVRPKIIRI_					0	0	0			REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2430602908134	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.816	1	22.993	22.493	23.493	1.177								0	0	0	0.42693	1	9113	9113		0.26902	0	1		+		8879	15415	4312	4334	10789	10789					0.1792600049311659
GVRPKIIRI	9	Unmodified	_GVRPKIIRI_					0	0	0			REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2431213259697	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.403	1	23.58	23.08	24.08	1.177								0	0	0	0.42693	1	9362	9362		0.26902	0.033176	1		+		8880	15415	4312	4334	10790	10790					0.1792600049311659
GVRPKIIRI	9	Unmodified	_GVRPKIIRI_					0	0	0			REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2426635622978	3	351.241471	1050.70258	0.051373	1.8044E-05	3.1328	0.0011004	3.1842	0.0011184	351.24256174002704	21.728	1.1454	23.344	23.02	24.165	1.6158					55	37	3	0	0	0	0.85206	2	9320	9320;9374		0.26902	0.033176	1	1320600	+		8881	15415	4312	4334	10791;10792	10791					0.1792600049311659
GVRPKIIRI	9	Unmodified	_GVRPKIIRI_					0	0	0			REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	REV__tr|A0A7D6VRM3|A0A7D6VRM3_9CLOTMolybdopterin-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2419921755791	3	351.241471	1050.70258	0.08191	2.877E-05	2.7621	0.00097015	2.844	0.00099892	351.2420449016967	22.572	0.42069	24.223	24.047	24.467	1.6511					17	13	2	0	0	0	0.11954	1	9374	9374		0.26902	0.033176	1	440850	+		8882	15415	4312	4334	10793	10793					0.1792600049311659
GVRRGQWHY	9	Unmodified	_GVRRGQWHY_					0	0	0			REV__ENST00000448759.1_1_1:43352960-43353698:-|nuORF	REV__ENST00000448759.1_1_1:43352960-43353698:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	387.1508056521416	3	386.868696	1157.58426	0.35863	0.00013874	-1.8462	-0.00071423	-1.4875	-0.00057548	386.86814520437326	24.099	0.33836	25.783	25.568	25.906	1.6845					14	10	2	0	0	0	0.11954	1	10024	10024		0.26902	0.1097	1	239320	+		8883	13116	4313	4335	10794	10794					0.011770212373221511
GVRRGQWHY	9	Unmodified	_GVRRGQWHY_					0	0	0			REV__ENST00000448759.1_1_1:43352960-43353698:-|nuORF	REV__ENST00000448759.1_1_1:43352960-43353698:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	386.868696	1157.58426	0.72737	0.0002814	-1.7872	-0.00069142	-1.0598	-0.00041002	386.8680531562591	24.517	0.30734	25.758	25.516	25.823	1.241	-0.012406	3.4786E-05	NaN	0.26902	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	510740	+		8884	13116	4313	4335							0.011770212373221511
GVRRKKKPP	9	Unmodified	_GVRRKKKPP_					0	0	0			REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0701782107353	3	355.90497	1064.69308	-1.7669	-0.00062884	-3.8258	-0.0013616	-5.5927	-0.0019905	355.9037985912423	24.509	0.3091	24.509	24.304	24.613	0					13	9	2	0	0	0	0.11938	1	10240	10240		0.26902	0.1097	1	341490	+		8885	9612	4314	4336	10795	10795					0.1633223220758282
GVRRQQRRR	9	Unmodified	_GVRRQQRRR_					0	0	0		ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2115356326103	2	606.368853	1210.72315	2.4321	0.0014747	0.92986	0.00056384	3.362	0.0020386	606.3695591643277	91.803	0.34681	91.803	91.693	92.04	0					24	10	3	0	0	0	0.11946	1	38448	38448		0	0	1	1757200			8886	7100	4315	4337	10796	10796					0.12621983925487257
GVRRQQRRR	9	Unmodified	_GVRRQQRRR_					0	0	0		ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2105590701103	2	606.368853	1210.72315	2.514	0.0015244	1.2027	0.00072926	3.7167	0.0022537	606.369642036181	91.088	0.31364	91.088	90.968	91.281	0					13	9	2	0	0	0	0.11946	1	38124	38124		0	0	1	533370			8887	7100	4315	4337	10797	10797					0.12621983925487257
GVRRQQRRR	9	Unmodified	_GVRRQQRRR_					0	0	0		ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2105590701103	2	606.368853	1210.72315	1.9807	0.0012011	1.3707	0.00083117	3.3515	0.0020322	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	0.11946	1	31829	31829		0.6015	0.14316	1	10235000			8888	7100	4315	4337	10798	10798					0.12621983925487257
GVRRQQRRR	9	Unmodified	_GVRRQQRRR_					0	0	0		ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	ENST00000523367.1_1_8:63161359-63775831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2101318240166	2	606.368853	1210.72315	2.2972	0.0013929	0.98005	0.00059427	3.2772	0.0019872	606.3688892844051	75.627	0.6862	75.949	75.678	76.364	0.32163					36	21	2	0	0	0	0.11946	1	31543	31543		0.6015	0.14316	1	1122300			8889	7100	4315	4337	10799	10799					0.12621983925487257
GVRRQRRP	8	Unmodified	_GVRRQRRP_					0	0	0			REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2117492556572	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.265	1	19.265	18.765	19.765	0								0	0	0	1.0178	1	8006	8006		0.45834	0	1		+		8890	14553	4316	4338	10800	10800					0.10536433711126847
GVRRQRRP	8	Unmodified	_GVRRQRRP_					0	0	0			REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2116271853447	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.459	1	19.459	18.959	19.959	0								0	0	0	1.0178	1	8088	8088		0.45834	0	1		+		8891	14553	4316	4338	10801	10801					0.10536433711126847
GVRRQRRP	8	Unmodified	_GVRRQRRP_					0	0	0			REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2120544314384	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.577	1	19.577	19.077	20.077	0								0	0	0	1.0178	1	8137	8137		0.45834	0	1		+		8892	14553	4316	4338	10802	10802					0.10536433711126847
GVRRQRRP	8	Unmodified	_GVRRQRRP_					0	0	0			REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2119018435478	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.706	1	19.706	19.206	20.206	0								0	0	0	1.0178	1	8190	8190		0.45834	0	1		+		8893	14553	4316	4338	10803	10803					0.10536433711126847
GVRRQRRP	8	Unmodified	_GVRRQRRP_					0	0	0			REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	REV__nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2120849490166	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.231	1	19.425	18.925	19.925	0.19342								0	0	0	1.0178	1	7986	7986		0.45834	0	1		+		8894	14553	4316	4338	10804	10804					0.10536433711126847
GVRRTNHLRVK	11	Unmodified	_GVRRTNHLRVK_					0	0	0			REV__ENST00000511815.1_3_5:141703462-141703594:-|nuORF	REV__ENST00000511815.1_3_5:141703462-141703594:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.4089233279228	2	668.407644	1334.80073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.947	1	48.947	48.447	49.447	0								0	0	0	0.63775	1	20437	20437		3.2813	0	1		+		8895	13574	4317	4339	10805	10805					0.14672577070973603
GVRRTRRRGK	10	Unmodified	_GVRRTRRRGK_					0	0	0		ENST00000324771.12_1_6:30867402-30867627:+|nuORF	ENST00000324771.12_1_6:30867402-30867627:+|nuORF	ENST00000324771.12_1_6:30867402-30867627:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3961669802666	2	621.392328	1240.7701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.512	1	92.839	92.339	93.339	1.3269								0	0	0	0.66237	1	38537	38537		0.45834	0	1				8896	5864	4318	4340	10806	10806					0.15934843476611604
GVRRWPNQL	9	Unmodified	_GVRRWPNQL_					0	0	0		ENST00000592891.1_1_19:55831331-55832446:-|nuORF;ENSG00000180061|ENST00000326652|TMEM150B	ENST00000592891.1_1_19:55831331-55832446:-|nuORF	ENST00000592891.1_1_19:55831331-55832446:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3215820193291	2	563.317432	1124.62031	2.5093	0.0014135	1.1835	0.00066666	3.6928	0.0020802	563.3178781751456	87.727	0.49886	87.962	87.855	88.354	0.23471					29	15	2	0	0	0	0.44535	1	36830	36830		18.135	1.1927	1	1196100			8897	4536	4319	4341	10807	10807					0.0629847841416904
GVRSKINR	8	Unmodified	_GVRSKINR_					0	0	0		SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|69|3|anti-sense	SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|69|3|anti-sense	SVA_C_dup104|chr4:48291729-48293365:+|1.5948730950857304|0.4994645192076182|1.67|429.0|69|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2865783572197	2	465.2856	928.556647	1.5669	0.00072906	1.1587	0.00053911	2.7256	0.0012682	465.2858669506745	70.616	0.42434	72.454	72.228	72.653	1.8378					33	13	3	0	0	0	0.89051	1	29577	29577		2.3027	0	1	7021000			8898	16015	4320	4342	10808	10808					0.08951117977085232
GVRTAKYKI	9	Unmodified	_GVRTAKYKI_					0	0	0			REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1386596560478	2	518.319109	1034.62366	2.3332	0.0012094	-2.7583	-0.0014297	-0.42503	-0.0002203	518.3186892219355	82.139	0.39162	82.139	81.946	82.337	0					18	12	2	0	0	0	0.11916	1	34233	34233		1.8442	1.0506	1	2513100	+		8899	15367	4321	4343	10809	10809					0.10773728468188892
GVRTVHKIWHV	11	Unmodified	_GVRTVHKIWHV_					0	0	0			REV__ENST00000251808.7_1_8:102504921-102555471:+|nuORF	REV__ENST00000251808.7_1_8:102504921-102555471:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	666.3917724490166	2	666.388388	1330.76222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.972	1	56.293	55.793	56.793	0.32088								0	0	0	0.63775	1	23441	23441		0.35063	0	1		+		8900	12145	4322	4344	10810	10810					0.11007271436483279
GVRVRGAH	8	Unmodified	_GVRVRGAH_					0	0	0		chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	426.0271179080009	2	426.25156	850.488568	2.0605	0.0008783	-4.3951	-0.0018734	-2.3346	-0.00099512	426.2497316438194	40.955	0.28695	42.848	42.673	42.96	1.8927					12	8	2	0	0	0	2.3239	1	17134	17134		2.5775	1.7838	1	763640			8901	172	4323	4345	10811	10811					0.057342931170865086
GVRVRGAH	8	Unmodified	_GVRVRGAH_					0	0	0		chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	chr1:44313228-44355260|91|18.95|0.0|20.85|-|2|ERI3,ERI3|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	426.25156	850.488568	2.2706	0.00096784	-6.0645	-0.002585	-3.7939	-0.0016171	426.24897607554254	41.373	0.28672	42.699	42.556	42.843	1.3254	-0.07454	-0.00051126	NaN	2.5775	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	480550			8902	172	4323	4345							0.057342931170865086
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1535217165947	3	384.581493	1150.72265	0.87447	0.00033631	0.80864	0.00031099	1.6831	0.00064729	384.5816531858923	26.246	0.87601	26.507	26.295	27.171	0.26173					62	28	3	0	0	0	0.12559	1	11080	11080		0.15932	0	1	11657000	+		8903	14064	4324	4346	10812	10812					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1534911990166	3	384.581493	1150.72265	0.97566	0.00037522	1.9445	0.00074783	2.9202	0.0011231	384.5825407558732	28.166	0.73463	28.437	28.088	28.823	0.27119					34	23	2	0	0	0	0.12559	1	11875	11875		0.15932	0	1	1337100	+		8904	14064	4324	4346	10813	10813					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1537658572197	3	384.581493	1150.72265	0.84647	0.00032554	1.8614	0.00071584	2.7078	0.0010414	384.5820342608022	25.621	0.85708	25.873	25.428	26.285	0.25197					89	27	5	0	0	0	0.12559	1	10661	10661		0.77653	0.77653	1	15357000	+		8905	14064	4324	4346	10814	10814					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1539489626884	3	384.581493	1150.72265	1.6432	0.00063194	1.0628	0.00040872	2.7059	0.0010407	384.58187515051753	40.659	0.50139	40.975	40.606	41.108	0.31683					17	15	2	0	0	0	0.12559	1	16998	16998		0.15932	0	1	395220	+		8906	14064	4324	4346	10815	10815					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1537048220634	3	384.581493	1150.72265	1.1716	0.00045057	1.1717	0.00045062	2.3433	0.00090119	384.58174683595945	31.687	1.0493	31.978	31.6	32.649	0.29086					56	33	2	0	0	0	0.12559	1	13510	13510		0.77653	0.54069	1	1230900	+		8907	14064	4324	4346	10816	10816					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1534911990166	3	384.581493	1150.72265	0.68334	0.0002628	1.8683	0.00071851	2.5516	0.00098131	384.5819498397828	24.384	0.85336	25.625	25.175	26.028	1.241					78	27	4	0	0	0	0.12559	1	10173	10173		0.15932	0.15932	1	15059000	+		8908	14064	4324	4346	10817	10817					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1538268923759	3	384.581493	1150.72265	0.074914	2.881E-05	1.7002	0.00065387	1.7751	0.00068268	384.5819476311714	30.281	1.5539	31.563	31.072	32.626	1.2825					68	49	2	0	0	0	0.12559	1	12951	12951		0.15932	0	1	928820	+		8909	14064	4324	4346	10818	10818					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1533691287041	3	384.581493	1150.72265	0.36719	0.00014121	1.158	0.00044535	1.5252	0.00058657	384.58176306113705	24.6	0.82214	26.285	26.143	26.965	1.6845					73	27	4	0	0	0	0.12559	1	10534	10534		0.77653	0.50751	1	15538000	+		8910	14064	4324	4346	10819	10819					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1537353396416	3	384.581493	1150.72265	0.5101	0.00019617	0.92785	0.00035683	1.438	0.00055301	384.581951972122	28.148	1.4266	29.924	29.479	30.906	1.7754					55	46	2	0	0	0	0.12559	1	11694	11694		0.77653	0.50751	1	1936000	+		8911	14064	4324	4346	10820	10820					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1536743044853	3	384.581493	1150.72265	0.57232	0.0002201	0.062974	2.4219E-05	0.63529	0.00024432	384.58139666063533	29.76	0.64149	31.559	31.356	31.997	1.7987					36	20	2	0	0	0	0.12559	1	12397	12397		0.15932	0	1	2094900	+		8912	14064	4324	4346	10821	10821					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1529724001884	3	384.581493	1150.72265	0.28013	0.00010773	1.5146	0.00058249	1.7947	0.00069022	384.58178732549754	22.47	0.57208	24.086	23.89	24.462	1.6158					50	18	4	0	0	0	0.12559	1	9433	9433		0.15932	0	1	11985000	+		8913	14064	4324	4346	10822	10822					0.15331751433086538
GVRWLLLVVP	10	Unmodified	_GVRWLLLVVP_					0	0	0			REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	REV__ENST00000590207.1_1_2:11268741-11272130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1533996462822	3	384.581493	1150.72265	0.59534	0.00022896	2.7071	0.0010411	3.3024	0.0012701	384.58221508144186	30.47	0.40726	32.285	32.044	32.452	1.8151					17	12	2	0	0	0	0.12559	1	12836	12836		0.15932	0	1	352350	+		8914	14064	4324	4346	10823	10823					0.15331751433086538
GVRWLRGIR	9	Unmodified	_GVRWLRGIR_					0	0	0		ENST00000278935.7_2_11:117283083-117283290:+|nuORF	ENST00000278935.7_2_11:117283083-117283290:+|nuORF	ENST00000278935.7_2_11:117283083-117283290:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	372.1022521853447	3	371.564836	1111.67268	1.5259	0.00056695	-1.8007	-0.00066907	-0.27482	-0.00010211	371.56418805059616	41.576	0.21661	43.469	43.325	43.541	1.8927					10	6	2	0	0	0	0.11938	1	17408	17408		1.1933	0.92432	1	410780			8915	5694	4325	4347	10824	10824					0.12131061547779609
GVSAGGGH	8	Unmodified	_GVSAGGGH_					0	0	0		ENST00000490362.1_1_2:217498183-217525611:+|nuORF	ENST00000490362.1_1_2:217498183-217525611:+|nuORF	ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.2995483279228	1	641.300164	640.292888	2.188	0.0014031	-2.4509	-0.0015717	-0.26288	-0.00016858	641.2984516741707	54.909	0.25739	54.909	54.725	54.982	0					9	7	2	0	0	0	0.89176	1	22873	22873		0.79363	0	1	410730			8916	6903	4326	4348	10825	10825					-0.04164717127628137
GVSAGGHT	8	Unmodified	_GVSAGGHT_					0	0	0		ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.3294555544853	1	685.326379	684.319102	1.9921	0.0013653	-2.6314	-0.0018034	-0.63923	-0.00043808	685.3249827769357	94.656	0.46317	94.656	94.425	94.889	0					24	14	2	0	0	0	0.89176	3	39515	39515;39564;39624		0.79363	0	1	1706100			8917	830	4327	4349	10826;10827;10828	10826					-0.035684479561609805
GVSAGGHT	8	Unmodified	_GVSAGGHT_					0	0	0		ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.3262206912041	1	685.326379	684.319102	2.6256	0.0017994	-2.5451	-0.0017442	0.080505	5.5172E-05	685.3250431333854	94.409	0.50438	94.553	94.356	94.861	0.14493					35	15	3	0	0	0	0.89176	3	39475	39475;39520;39571		0.79363	0	1	1921100			8918	830	4327	4349	10829;10830;10831	10829					-0.035684479561609805
GVSAGGHT	8	Unmodified	_GVSAGGHT_					0	0	0		ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	685.326379	684.319102	3.8666	0.0026499	-4.7219	-0.0032361	-0.85534	-0.00058619	685.3234514327096	93.806	0.57259	94.678	94.353	94.926	0.87176	0.01655	-0.00091018	NaN	0.79363	46	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8597200			8919	830	4327	4349							-0.035684479561609805
GVSAGGHT	8	Unmodified	_GVSAGGHT_					0	0	0		ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	ENSG00000068323|ENST00000315869|TFE3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	685.326379	684.319102	2.7276	0.0018693	-3.8026	-0.002606	-1.075	-0.00073673	685.3238354048508	93.481	0.62295	94.758	94.42	95.043	1.277	0.096814	-0.00028013	NaN	0.79363	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9719600			8920	830	4327	4349							-0.035684479561609805
GVSALLGV	8	Unmodified	_GVSALLGV_					0	0	0		tr|A0A553SRP9|A0A553SRP9_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_01485PE=4SV=1	tr|A0A553SRP9|A0A553SRP9_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_01485PE=4SV=1	tr|A0A553SRP9|A0A553SRP9_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_01485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	715.4352905154228	1	715.434867	714.42759	1.3818	0.00098858	1.163	0.00083207	2.5448	0.0018207	715.4355413678037	41.003	0.25481	42.896	42.736	42.991	1.8927					11	7	2	0	0	0	0.66111	1	17201	17201		34.187	0	1	605930			8921	16573	4328	4350	10832	10832					0.0589534329427579
GVSDHLKRVH	10	Unmodified	_GVSDHLKRVH_					0	0	0			REV__ENSG00000153266|ENST00000283268|FEZF2	REV__ENSG00000153266|ENST00000283268|FEZF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3265258669853	2	574.320171	1146.62579	4.1029	0.0023564	-0.47066	-0.00027031	3.6323	0.0020861	574.3199571913095	90.194	0.30949	91.599	91.431	91.74	1.4045					16	9	2	0	0	0	0.89803	1	37974	37974		1.6526	1.0511	1	1022700	+		8922	10452	4329	4351	10833	10833					0.0583415720600442
GVSHCHQS	8	Unmodified	_GVSHCHQS_					0	0	0		ENST00000555968.1_1_14:24034769-24034943:+|nuORF	ENST00000555968.1_1_14:24034769-24034943:+|nuORF	ENST00000555968.1_1_14:24034769-24034943:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.3614379763603	1	854.357361	853.350085	3.0955	0.0026447	2.2754	0.001944	5.3709	0.0045886	854.3588273526924	98.438	0.23138	98.694	98.565	98.796	0.25636					20	7	4	0	0	0	0.88504	1	41403	41403		5.7604	0	1	178210000			8923	7300	4330	4352	10834	10834					-0.0824561791355336
GVSHCHQS	8	Unmodified	_GVSHCHQS_					0	0	0		ENST00000555968.1_1_14:24034769-24034943:+|nuORF	ENST00000555968.1_1_14:24034769-24034943:+|nuORF	ENST00000555968.1_1_14:24034769-24034943:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	854.357361	853.350085	1.2694	0.0010845	0.27428	0.00023433	1.5437	0.0013188	854.3571405576064	98.78	0.24715	98.78	98.66	98.907	0	0.025484	-0.00059139	NaN	5.7604	21	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214540000			8924	7300	4330	4352							-0.0824561791355336
GVSHYRFSI	9	Unmodified	_GVSHYRFSI_					0	0	0		LCT|p.A1603Cfs*2|1|0.24|ENSG00000115850|chr2:135800666-135800667|-/A|frameshift_variant;ENSG00000115850|ENST00000264162|LCT	LCT|p.A1603Cfs*2|1|0.24|ENSG00000115850|chr2:135800666-135800667|-/A|frameshift_variant	LCT|p.A1603Cfs*2|1|0.24|ENSG00000115850|chr2:135800666-135800667|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1919433474541	2	533.277441	1064.54033	2.4475	0.0013052	-1.2884	-0.00068709	1.1591	0.0006181	533.2768979186621	83.413	0.27779	83.683	83.523	83.801	0.27029					10	8	2	0	0	0	0.11645	1	34912	34912		4.756	0.42677	1	301060			8925	1940	4331	4353	10835	10835					0.01063992020317528
GVSIVDTR	8	Unmodified	_GVSIVDTR_					0	0	0		tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.7380248904228	2	423.737617	845.460681	0.8928	0.00037831	-1.1834	-0.00050145	-0.29059	-0.00012313	423.736884103005	65.907	0.31704	65.907	65.708	66.025	0					14	9	2	0	0	0	0.88163	1	27435	27435		7.9102	0	1	990320			8926	16901	4332	4354	10836	10836					0.03176925346315329
GVSIVDTR	8	Unmodified	_GVSIVDTR_					0	0	0		tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	423.737617	845.460681	2.2323	0.00094592	-2.3876	-0.0010117	-0.15527	-6.5795E-05	423.73659391303806	65.679	0.37793	66.006	65.833	66.211	0.32689	-0.055307	-0.00052472	NaN	7.9102	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1365900			8927	16901	4332	4354							0.03176925346315329
GVSIVDTR	8	Unmodified	_GVSIVDTR_					0	0	0		tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	423.737617	845.460681	2.3868	0.0010114	-1.8708	-0.00079274	0.51603	0.00021866	423.7366731856933	64.344	0.37788	66.272	66.077	66.455	1.928	0.21048	-8.6761E-05	NaN	7.9102	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	897610			8928	16901	4332	4354							0.03176925346315329
GVSKKGGS	8	Unmodified	_GVSKKGGS_					0	0	0		ENST00000240185.7_1_1:11083899-11083992:+|nuORF	ENST00000240185.7_1_1:11083899-11083992:+|nuORF	ENST00000240185.7_1_1:11083899-11083992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	719.4106933474541	1	719.404629	718.397353	2.1603	0.0015541	2.5881	0.0018619	4.7484	0.003416	719.4072515619165	58.736	0.35183	58.736	58.59	58.942	0					15	10	2	0	0	0	0.89176	2	24488	24488;24554		0.79363	0	1	1042500			8929	5565	4333	4355	10837;10838	10837					0.02688984629105562
GVSKKGGS	8	Unmodified	_GVSKKGGS_					0	0	0		ENST00000240185.7_1_1:11083899-11083992:+|nuORF	ENST00000240185.7_1_1:11083899-11083992:+|nuORF	ENST00000240185.7_1_1:11083899-11083992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	719.4086791872978	1	719.404629	718.397353	2.435	0.0017517	0.55434	0.0003988	2.9893	0.0021505	719.4051504763522	58.617	0.40282	58.943	58.716	59.119	0.32553					19	13	2	0	0	0	0.89176	2	24551	24551;24599		0.79363	0	1	615110			8930	5565	4333	4355	10839;10840	10839					0.02688984629105562
GVSKLPERQLR	11	Unmodified	_GVSKLPERQLR_					0	0	0			REV__PRKDC|p.A2691E|1|0.04|ENSG00000253729|chr8:47834276-47834276|G/T|missense_variant	REV__PRKDC|p.A2691E|1|0.04|ENSG00000253729|chr8:47834276-47834276|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8845092654228	2	641.883136	1281.75172	1.6316	0.0010473	-0.35532	-0.00022808	1.2763	0.00081925	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	1.0362	1	33311	33311		1.3295	0.25807	1	3189400	+		8931	14604	4334	4356	10841	10841					0.12211243991396259
GVSKNGPLEA	10	Unmodified	_GVSKNGPLEA_					0	0	0			REV__ENST00000577164.1_1_17:1617268-1619543:-|nuORF	REV__ENST00000577164.1_1_17:1617268-1619543:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2632018923759	2	486.261456	970.50836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.741	1	25.392	24.892	25.892	1.6511								0	0	0	0.6607	1	9914	9914		3.2813	0.97858	1		+		8932	13985	4335	4357	10842	10842					0.021925795465108422
GVSKRSNTVV	10	Unmodified	_GVSKRSNTVV_					0	0	0		ENSG00000255423|ENST00000533473|EBLN2	ENSG00000255423|ENST00000533473|EBLN2	ENSG00000255423|ENST00000533473|EBLN2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.1807739138603	3	349.536612	1045.58801	1.3473	0.00047092	3.2752	0.0011448	4.6225	0.0016157	349.5377541383502	50.73	0.46689	51.058	50.856	51.323	0.32824					18	14	2	0	0	0	0.12556	1	21353	21353		0.12286	0	1	717460			8933	5404	4336	4358	10843	10843					0.0670364622053512
GVSKSAEMW	9	Unmodified	_GVSKSAEMW_					0	0	0		ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7373535037041	2	497.73676	993.458967	0.88574	0.00044087	-0.11454	-5.7012E-05	0.7712	0.00038385	497.7373599285688	26.272	0.41897	26.272	26.087	26.506	0					38	13	4	0	0	0	0.30098	1	10970	10970		25.399	4.9457	1	1371100			8934	5966	4337	4359	10844	10844					-0.038024517339295016
GVSKSAEMW	9	Unmodified	_GVSKSAEMW_					0	0	0		ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	497.73676	993.458967	1.5225	0.00075779	-0.37159	-0.00018495	1.1509	0.00057283	497.73685966505514	25.896	0.27031	26.147	26.044	26.314	0.25197	-0.01615	0.00028293	NaN	25.399	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	530500			8935	5966	4337	4359							-0.038024517339295016
GVSKSAEMW	9	Unmodified	_GVSKSAEMW_					0	0	0		ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	ENST00000347230.8_2_14:68275974-68282693:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	497.73676	993.458967	1.3434	0.00066865	-1.1278	-0.00056134	0.2156	0.00010731	497.73595339990095	24.83	0.11884	26.071	26	26.119	1.241	-0.092599	-0.00046984	NaN	25.399	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	145660			8936	5966	4337	4359							-0.038024517339295016
GVSLPLVAWF	10	Unmodified	_GVSLPLVAWF_					0	0	0			REV__ENST00000471811.1_1_3:49211676-49212464:+|nuORF	REV__ENST00000471811.1_1_3:49211676-49212464:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.542816	1087.60662	-1.4677	-0.00053356	-0.37014	-0.00013456	-1.8378	-0.00066812	363.5426688068638	26.347	0.47726	26.347	26.087	26.564	0					24	15	2	0	0	0	0.12559	1	11088	11088		0.15932	0.15932	1	268080	+		8937	13289	4338	4360	10845	10845					0.06631807862368078
GVSLTRAFIT	10	Unmodified	_GVSLTRAFIT_					0	0	0			REV__tr|A0A7D6VRR2|A0A7D6VRR2_9CLOTPTSmannose/fructose/sorbosetransportersubunitIICOS=ClostridiumintestinaleOX=36845GN=HZF06_01835PE=4SV=1	REV__tr|A0A7D6VRR2|A0A7D6VRR2_9CLOTPTSmannose/fructose/sorbosetransportersubunitIICOS=ClostridiumintestinaleOX=36845GN=HZF06_01835PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0696594119072	3	355.541475	1063.60259	-0.1825	-6.4885E-05	-0.40312	-0.00014333	-0.58562	-0.00020821	355.5419054154384	27.734	0.28052	29.013	28.873	29.153	1.2789					12	8	2	0	0	0	0.12547	1	11651	11651		0.69767	0	1	670270	+		8938	15422	4339	4361	10846	10846					0.07333718368636255
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1422302126884	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.39032	1	1.0577	0.55771	1.5577	0.66738								0	0	0	0.42693	1	159	159		1.1933	0.735	1				8939	6384	4340	4362	10847	10847					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414062380791	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2851	1	1.9384	1.4384	2.4384	0.65331								0	0	0	0.42693	1	526	526		1.1933	0.735	1				8940	6384	4340	4362	10848	10848					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415588259697	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1328	1	4.7564	4.2564	5.2564	0.62362								0	0	0	0.42693	1	1705	1705		1.1933	0.735	1				8941	6384	4340	4362	10849	10849					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414062380791	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.67	1	7.2912	6.7912	7.7912	0.62127								0	0	0	0.42693	1	2757	2757		1.1933	0.735	1				8942	6384	4340	4362	10850	10850					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414367556572	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5871	1	9.2236	8.7236	9.7236	0.63651								0	0	0	0.42693	1	3564	3564		1.1933	0.735	1				8943	6384	4340	4362	10851	10851					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415588259697	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8031	1	3.5515	3.0515	4.0515	0.7484								0	0	0	0.42693	1	1163	1163		1.1933	0.735	1				8944	6384	4340	4362	10852	10852					-0.053067136593540454
GVSPMEQPG	9	Unmodified	_GVSPMEQPG_					0	0	0		ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	ENST00000411683.1_1_11:64645871-64647159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414062380791	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4714	1	9.2059	8.7059	9.7059	0.73452								0	0	0	0.42693	1	3521	3521		1.1933	0.735	1				8945	6384	4340	4362	10853	10853					-0.053067136593540454
GVSPPWPGW	9	Unmodified	_GVSPPWPGW_					0	0	0		AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|15|2|anti-sense	AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|15|2|anti-sense	AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|15|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7435790896416	2	491.742702	981.470852	1.604	0.00078874	0.63067	0.00031013	2.2346	0.0010989	491.74287916846924	65.156	0.53545	65.156	64.914	65.449	0					45	16	5	0	0	0	0.76456	1	27213	27213		4.756	0	1	3393300			8946	51	4341	4363	10854	10854					-0.020624669284416086
GVSRLRNLRP	10	Unmodified	_GVSRLRNLRP_					0	0	0		ENSG00000128268|ENST00000341184|MGAT3	ENSG00000128268|ENST00000341184|MGAT3	ENSG00000128268|ENST00000341184|MGAT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3562499880791	2	584.357088	1166.69962	1.8949	0.0011073	-1.9139	-0.0011184	-0.018965	-1.1082E-05	584.3564719040249	76.338	0.93048	76.338	76.164	77.095	0					49	29	3	0	0	0	0.89803	2	31736	31736;31955		0.45834	0	1	2118400			8947	2361	4342	4364	10855;10856	10855					0.12294125368293862
GVSRRAVNKF	10	Unmodified	_GVSRRAVNKF_					0	0	0			REV__nc|ENSG00000108406|Q8IX18-4|DHX40	REV__nc|ENSG00000108406|Q8IX18-4|DHX40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3311035037041	2	567.330539	1132.64652	2.677	0.0015188	1.1545	0.00065498	3.8315	0.0021737	567.3310613782425	73.454	1.2245	75.25	74.184	75.409	1.7962					84	38	3	0	0	0	0.89803	1	30675	30675		1.4819	0	1	3948400	+		8948	9255	4343	4365	10857	10857					0.08550747585650242
GVSRSDPSF	9	Unmodified	_GVSRSDPSF_					0	0	0		ENST00000326005.10_1_15:64980320-64980389:-|nuORF	ENST00000326005.10_1_15:64980320-64980389:-|nuORF	ENST00000326005.10_1_15:64980320-64980389:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1987182497978	2	476.230156	950.445759	1.0921	0.00052008	-0.53747	-0.00025596	0.55461	0.00026412	476.2298340267163	14.938	0.62344	15.051	14.758	15.382	0.11295					32	19	2	0	0	0	0.11645	1	6236	6236		2.0598	0	1	656320			8949	5868	4344	4366	10858	10858					-0.031445665216665475
GVSSEAIPIL	10	Unmodified	_GVSSEAIPIL_					0	0	0		nc|ENSG00000125319|Q8N3J3-3|HROB;ENSG00000125319|ENST00000585683|HROB;nc|ENSG00000125319|Q8N3J3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2848998904228	2	493.281857	984.549162	3.9877	0.0019671	3.0456	0.0015024	7.0333	0.0034694	493.2835854953811	95.752	0.36935	96.174	95.975	96.344	0.4212					23	11	3	0	0	0	0.65574	1	40309	40309		20.454	2.3073	1	4427900			8950	2256	4345	4367	10859	10859					0.056269208661547054
GVSSEAIPIL	10	Unmodified	_GVSSEAIPIL_					0	0	0		nc|ENSG00000125319|Q8N3J3-3|HROB;ENSG00000125319|ENST00000585683|HROB;nc|ENSG00000125319|Q8N3J3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2835265994072	2	493.281857	984.549162	3.3513	0.0016531	1.7571	0.00086673	5.1084	0.0025199	493.28262896714136	95.489	0.37402	95.891	95.681	96.055	0.40208					29	13	3	0	0	0	0.65574	1	40165	40165		20.454	2.3186	1	3296100			8951	2256	4345	4367	10860	10860					0.056269208661547054
GVSVLYTVTLW	11	Unmodified	_GVSVLYTVTLW_					0	0	0		nc|ENSG00000096996|P42701-3|IL12RB1;nc|ENSG00000096996|P42701-2|IL12RB1;ENSG00000096996|ENST00000593993|IL12RB1	nc|ENSG00000096996|P42701-3|IL12RB1	nc|ENSG00000096996|P42701-3|IL12RB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	619.3446533083916	2	619.344989	1236.67542	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.536	1	63.536	63.036	64.036	0								0	0	0	0.63775	1	26487	26487		1.1933	0.66858	1				8952	1198	4346	4368	10861	10861					0.06655427371424594
GVSYQKAMFIF	11	Unmodified	_GVSYQKAMFIF_					0	0	0		ENST00000473604.2_1_9:132580793-132585603:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	ENST00000473604.2_1_9:132580793-132585603:-|nuORF	ENST00000473604.2_1_9:132580793-132585603:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.584	1	22.584	22.084	23.084	0								0	0	0	0.63775	1	9398	9398		0.50596	0.34663	1				8953	2740	4347	4369	10862	10862					0.014592008395084122
GVSYQKAMFIF	11	Unmodified	_GVSYQKAMFIF_					0	0	0		ENST00000473604.2_1_9:132580793-132585603:-|nuORF;ENSG00000136827|ENST00000351698|TOR1A	ENST00000473604.2_1_9:132580793-132585603:-|nuORF	ENST00000473604.2_1_9:132580793-132585603:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.846	1	38.122	37.622	38.622	1.2762								0	0	0	0.63775	1	15464	15464		0.50596	0.051438	1				8954	2740	4347	4369	10863	10863					0.014592008395084122
GVSYSCNITI	10	Unmodified	_GVSYSCNITI_					0	0	0			REV__nc|ENSG00000211820|A0A0B4J266|TRAV41	REV__nc|ENSG00000211820|A0A0B4J266|TRAV41	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.7552368044853	2	528.755149	1055.49575	2.5054	0.0013247	0.098491	5.2078E-05	2.6039	0.0013768	528.7547790210236	59.559	0.28331	59.885	59.743	60.027	0.32553					10	8	2	0	0	0	0.87699	1	24929	24929		3.9444	0.66309	1	1966600	+		8955	14533	4348	4370	10864	10864					-0.029781999080341848
GVSYSVHAY	9	Unmodified	_GVSYSVHAY_					0	0	0		ENSG00000099812|ENST00000215582|MISP	ENSG00000099812|ENST00000215582|MISP	ENSG00000099812|ENST00000215582|MISP	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1607543826103	3	328.159142	981.455596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.843	1	18.016	17.516	18.516	0.17285								0	0	0	0.42693	1	7406	7406		1.1933	0.735	1				8956	1216	4349	4371	10865	10865					-0.03587378516294848
GVTARVEPPK	10	Unmodified	_GVTARVEPPK_					0	0	0			REV__ENST00000595984.5_1_19:19010755-19014100:-|nuORF	REV__ENST00000595984.5_1_19:19010755-19014100:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3070556521416	2	527.306198	1052.59784	1.8244	0.00096204	-3.433	-0.0018103	-1.6086	-0.00084822	527.3057192467344	41.965	0.97211	43.886	43.537	44.509	1.9211					57	30	3	0	0	0	0.88314	1	17578	17578		3.2813	0.39209	1	2926000	+		8957	14092	4350	4372	10866	10866					0.07364834225904815
GVTDSTET	8	Unmodified	_GVTDSTET_					0	0	0		ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	ENSG00000182348|ENST00000333190|ZNF804B	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1788818240166	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.301	1	40.301	39.801	40.801	0								0	0	0	1.0178	1	16884	16884		2.5775	0	1				8958	4614	4351	4373	10867	10867					-0.066796432951719
GVTELSAFTL	10	Unmodified	_GVTELSAFTL_					0	0	0			REV__ENST00000476331.5_1_3:12776275-12782752:-|nuORF	REV__ENST00000476331.5_1_3:12776275-12782752:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1411010622978	2	519.279315	1036.54408	3.1854	0.0016541	1.4109	0.00073267	4.5963	0.0023868	519.2807286899014	62.178	0.18201	64.135	63.968	64.15	1.9571					9	5	2	0	0	0	0.1245	1	26022	26022		10.824	2.2306	1	831040	+		8959	8876	4352	4374	10868	10868					0.027266170035318282
GVTFPCHFARR	11	Unmodified	_GVTFPCHFARR_					0	0	0		ENST00000397501.5_1_8:27316032-27316239:+|nuORF	ENST00000397501.5_1_8:27316032-27316239:+|nuORF	ENST00000397501.5_1_8:27316032-27316239:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8893310427666	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.488	1	26.488	25.988	26.988	0								0	0	0	0.63775	1	11065	11065		0.45452	0	1				8960	6312	4353	4375	10869	10869					0.011907902252232816
GVTGISLK	8	Unmodified	_GVTGISLK_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1275817751884	2	387.739628	773.464704	0.055398	2.148E-05	-2.1673	-0.00084033	-2.1119	-0.00081885	387.73993497285653	16.504	0.17858	17.543	17.437	17.615	1.0392					7	5	2	0	0	0	2.3239	1	6853	6853		2.3027	0	1	363100			8961	17094	4354	4376	10870	10870					0.06891014840039134
GVTGLAVLG	9	Unmodified	_GVTGLAVLG_					0	0	0			REV__nc|ENSG00000138172|Q9HA72-3|CALHM2	REV__nc|ENSG00000138172|Q9HA72-3|CALHM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	786.4717895388603	1	786.47198	785.464704	1.8394	0.0014466	-0.39298	-0.00030906	1.4464	0.0011376	786.4714192884007	65.797	0.25557	65.797	65.644	65.9	0					12	7	2	0	0	0	0.1735	1	27436	27436		36.044	1.9418	1	522790	+		8962	10050	4355	4377	10871	10871					0.06339014840034451
GVTHRRPR	8	Unmodified	_GVTHRRPR_					0	0	0			REV__ENST00000567322.1_1_16:30665560-30666759:+|nuORF	REV__ENST00000567322.1_1_16:30665560-30666759:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	489.5903198122978	2	489.788841	977.56313	-0.097706	-4.7855E-05	3.6971	0.0018108	3.5993	0.0017629	489.790458366593	12.795	0.096316	13.489	13.408	13.505	0.69396					4	2	2	0	0	0	2.3239	1	5295	5295		5.7604	0.52976	1	194200	+		8963	10521	4356	4378	10872	10872					0.07345055928465172
GVTIIPHSGIL	11	Unmodified	_GVTIIPHSGIL_					0	0	0			REV__tr|A0A553SLQ8|A0A553SLQ8_NIACINUDIXdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21105PE=3SV=1	REV__tr|A0A553SLQ8|A0A553SLQ8_NIACINUDIXdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21105PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8309814333916	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	1.0084	1	30229	30229		3.2813	0.97858	1	5931400	+		8964	14994	4357	4379	10873	10873					0.10094577919812764
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3608886599541	2	526.359911	1050.70527	0.89321	0.00047015	1.722	0.00090639	2.6152	0.0013765	526.3606858639121	18.286	0.68093	18.286	17.996	18.677	0					45	24	2	0	0	0	0.89803	3	7610	7610;7661;7736		0.45834	0.45834	1	2183400	+		8965	15212	4358	4380	10874;10875;10876	10874					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3607665896416	2	526.359911	1050.70527	0.60337	0.00031759	2.3954	0.0012609	2.9988	0.0015785	526.3610059998538	17.318	0.40821	17.469	17.217	17.625	0.15093					46	15	4	0	0	0	0.89803	4	7113	7113;7158;7199;7247		0.45834	0.45834	1	11521000	+		8966	15212	4358	4380	10877;10878;10879;10880	10877					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2431518435478	3	351.242366	1050.70527	0.085562	3.0053E-05	2.1527	0.00075613	2.2383	0.00078618	351.2432691140426	17.318	1.491	17.469	17.151	18.642	0.15093					166	53	6	0	0	0	0.89803	1	7353	7353		0.77653	0.50751	1	243130000	+		8967	15212	4358	4380	10881	10881					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2432128787041	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89803	3	8378	8378;8536;8586		0.15932	0	1	155460000	+		8968	15212	4358	4380	10882;10883;10884	10882					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2431823611259	3	351.242366	1050.70527	0.41649	0.00014629	2.4862	0.00087327	2.9027	0.0010196	351.243198218401	23.418	0.68784	23.651	23.346	24.033	0.23306					40	21	2	0	0	0	0.89803	1	9723	9723		0.15932	0	1	455340	+		8969	15212	4358	4380	10885	10885					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3613769412041	2	526.359911	1050.70527	0.38444	0.00020235	2.6914	0.0014166	3.0758	0.001619	526.3611431956508	16.416	0.27876	17.243	17.188	17.467	0.82643					23	13	2	0	0	0	0.89803	2	6829	6829;6917		0.45834	0	1	5206300	+		8970	15212	4358	4380	10886;10887	10886					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2428161501884	3	351.242366	1050.70527	-0.31456	-0.00011049	2.7544	0.00096747	2.4399	0.00085699	351.24338489352726	20.872	1.9953	21.997	21.775	23.77	1.1254					139	65	5	0	0	0	0.89803	2	8853	8853;9168		0.15932	0	1	92439000	+		8971	15212	4358	4380	10888;10889	10888					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2430602908134	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.922	1	18.901	18.401	19.401	0.97922								0	0	0	0.66254	1	7461	7461		0.15932	0	1		+		8972	15212	4358	4380	10890	10890					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3619872927666	2	526.359911	1050.70527	0.33269	0.00017512	2.0773	0.0010934	2.41	0.0012685	526.3609079169217	16.233	0.37689	17.272	17.091	17.467	1.0392					42	13	4	0	0	0	0.89803	1	6810	6810		0.45834	0	1	28760000	+		8973	15212	4358	4380	10891	10891					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2434265017509	3	351.242366	1050.70527	-0.14765	-5.186E-05	2.7716	0.0009735	2.6239	0.00092164	351.24329138237425	17.008	0.39231	18.31	18.08	18.472	1.3023					15	12	2	0	0	0	0.89803	1	7075	7075		0.15932	0	1	648460	+		8974	15212	4358	4380	10892	10892					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3615600466728	2	526.359911	1050.70527	0.40819	0.00021486	2.7741	0.0014602	3.1822	0.001675	526.361331174261	18.028	0.46588	19.476	19.292	19.758	1.448					36	15	3	0	0	0	0.89803	2	7446	7446;7496		0.45834	0.45834	1	11213000	+		8975	15212	4358	4380	10893;10894	10893					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2432128787041	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	1	7802	7802		0.15932	0	1	364430000	+		8976	15212	4358	4380	10895	10895					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2434875369072	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.315	1	20.839	20.339	21.339	1.5237								0	0	0	0.66254	1	8028	8028		0.15932	0	1		+		8977	15212	4358	4380	10896	10896					0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	351.242366	1050.70527	-1.9139	-0.00067226	4.1832	0.0014693	2.2693	0.00079706	351.2434757421245	24.024	0.43447	24.024	23.839	24.273	0	0.18646	0.00096223	NaN	0.15932	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245030	+		8978	15212	4358	4380							0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	351.242366	1050.70527	-2.1673	-0.00076125	3.6361	0.0012772	1.4688	0.00051591	351.24373139286627	18.366	1.3628	18.366	17.964	19.327	0	0.051302	0.0003009	NaN	0.15932	171	46	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111270000	+		8979	15212	4358	4380							0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	526.359911	1050.70527	0.72452	0.00038136	3.1957	0.0016821	3.9202	0.0020634	526.3614375181975	19.628	0.78638	19.822	19.325	20.112	0.19342	0.12706	1.5209E-06	NaN	0.45834	49	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5471300	+		8980	15212	4358	4380							0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	526.359911	1050.70527	0.69343	0.000365	3.8874	0.0020462	4.5809	0.0024112	526.3618393138505	18.808	0.45167	19.787	19.506	19.957	0.97922	0.092146	0.00072976	NaN	0.45834	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	706200	+		8981	15212	4358	4380							0.18194411107424457
GVTILPLIIL	10	Unmodified	_GVTILPLIIL_					0	0	0			REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	REV__tr|A0A553SSS9|A0A553SSS9_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_03630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	351.242366	1050.70527	-0.78857	-0.00027698	1.3704	0.00048135	0.58185	0.00020437	351.24265663822615	17.37	0.14264	18.268	18.196	18.339	0.89794	-0.046788	-0.0020865	NaN	0.15932	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183480	+		8982	15212	4358	4380							0.18194411107424457
GVTIRKHE	8	Unmodified	_GVTIRKHE_					0	0	0		ENSG00000179454|ENST00000396128|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	ENSG00000179454|ENST00000396128|KLHL28	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.2731811404228	2	470.272158	938.529764	3.3424	0.0015719	-0.62052	-0.00029181	2.7219	0.00128	470.2716043850619	74.757	0.43356	75.081	74.864	75.297	0.32463					29	13	3	0	0	0	0.89008	1	31233	31233		2.5775	0.27475	1	4037300			8983	4516	4359	4381	10897	10897					0.058040093658974
GVTKAKTG	8	Unmodified	_GVTKAKTG_					0	0	0		ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.2239562869072	2	381.229428	760.444303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.31	1	88.31	87.81	88.81	0								0	0	0	1.0178	1	36917	36917		2.3027	1.5091	1				8984	3538	4360	4382	10898	10898					0.05449844180236596
GVTKLPPG	8	Unmodified	_GVTKLPPG_					0	0	0		ENSG00000176641|ENST00000312828|RNF152	ENSG00000176641|ENST00000312828|RNF152	ENSG00000176641|ENST00000312828|RNF152	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1537963747978	2	384.734346	767.454139	0.064555	2.4837E-05	2.8321	0.0010896	2.8966	0.0011144	384.73614030038965	49.562	0.70657	49.562	49.222	49.928	0					35	22	2	0	0	0	2.3239	1	20596	20596		0.6015	0.6015	1	482980			8985	4413	4361	4383	10899	10899					0.0611103218561766
GVTKSIIKK	9	Unmodified	_GVTKSIIKK_					0	0	0		tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2170593142509	3	325.218332	972.633166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.927	1	12.715	12.215	13.215	0.78751								0	0	0	0.42693	1	4952	4952		1.0715	0.67075	1				8986	16745	4362	4384	10900	10900					0.14575496753718653
GVTLAALLL	9	Unmodified	_GVTLAALLL_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	870.5669433474541	1	870.565881	869.558604	3.504	0.0030505	-0.30617	-0.00026654	3.1979	0.002784	870.5644012110631	81.719	0.30876	82.952	82.78	83.089	1.2332					16	9	2	0	0	0	0.03795	1	34286	34286		77.984	0	1	1581000			8987	3015	4363	4385	10901	10901					0.11860733942330626
GVTLAALLL	9	Unmodified	_GVTLAALLL_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	870.5712768435478	1	870.565881	869.558604	3.0151	0.0026248	-0.33235	-0.00028933	2.6828	0.0023355	870.56664955434	81.18	0.24811	82.876	82.766	83.014	1.6959					11	7	2	0	0	0	0.069258	1	34056	34056		60.39	0	1	1851500			8988	3015	4363	4385	10902	10902					0.11860733942330626
GVTLAALLL	9	Unmodified	_GVTLAALLL_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000489018.1_1_1:109812400-109812848:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	870.565881	869.558604	2.2929	0.0019961	-3.327	-0.0028964	-1.0341	-0.00090029	870.5616457066897	82.715	0.21222	82.985	82.847	83.06	0.27029	0.047646	-0.0016653	NaN	77.984	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	878010			8989	3015	4363	4385							0.11860733942330626
GVTLHTRDLQ	10	Unmodified	_GVTLHTRDLQ_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000505306.5_1_17:48154319-48165696:+|nuORF;ENST00000507771.5_1_17:48154781-48156326:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3124267458916	2	570.312012	1138.60947	0.53181	0.0003033	0.34445	0.00019645	0.87626	0.00049974	570.312185644327	22.106	0.28215	23.721	23.579	23.862	1.6158					21	8	4	0	0	0	0.78468	1	9214	9214		13.906	0	1	1358300			8990	496	4364	4386	10903	10903					0.04571031249201951
GVTLINTVLGF	11	Unmodified	_GVTLINTVLGF_					0	0	0		tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3336669802666	2	567.331882	1132.64921	2.659	0.0015086	-1.8854	-0.0010696	0.77363	0.00043891	567.3307807089376	75.381	1.1833	76.688	76.404	77.588	1.3063					51	38	2	0	0	0	1.0031	1	31585	31585		3.5965	0.60125	1	1748300			8991	17282	4365	4387	10904	10904					0.0881915819995811
GVTLINTVLGF	11	Unmodified	_GVTLINTVLGF_					0	0	0		tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	tr|A0A7D7A452|A0A7D7A452_9CLOTCollagen-likerepeatprefacedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3340942263603	2	567.331882	1132.64921	2.944	0.0016702	-0.41324	-0.00023445	2.5308	0.0014358	567.332196888685	74.244	0.7532	76.041	75.869	76.622	1.7962					58	23	3	0	0	0	0.95983	2	31339	31287;31339		6.2058	2.6093	1	1493700			8992	17282	4365	4387	10905;10906	10906					0.0881915819995811
GVTLQICLK	9	Unmodified	_GVTLQICLK_					0	0	0			REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7902709841728	2	487.788795	973.563038	2.5722	0.0012547	1.293	0.00063071	3.8652	0.0018854	487.78874139269897	66.902	0.3257	67.227	67.063	67.389	0.32449					15	10	2	0	0	0	0.83213	1	28031	28031		2.0598	0.21551	1	522610	+		8993	11297	4366	4388	10907	10907					0.07519875093578321
GVTLQICLK	9	Unmodified	_GVTLQICLK_					0	0	0			REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	487.788795	973.563038	2.5722	0.0012547	1.293	0.00063071	3.8652	0.0018854	487.78874139269897	66.902	0.3257	67.227	67.063	67.389	0.32449	0.10094	-0.0010157	NaN	2.0598	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522610	+		8994	11297	4366	4388							0.07519875093578321
GVTLQICLK	9	Unmodified	_GVTLQICLK_					0	0	0			REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.788795	973.563038	1.8216	0.00088853	2.7753	0.0013537	4.5968	0.0022423	487.7907549148769	65.117	0.80289	67.025	66.783	67.586	1.9085	-0.10094	0.00043032	NaN	2.0598	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	932670	+		8995	11297	4366	4388							0.07519875093578321
GVTLVGRPRG	10	Unmodified	_GVTLVGRPRG_					0	0	0		ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	ENSG00000261949|ENST00000610896|GFY	MSMS	GG20161007_CRH_Patient100_W632_02	4	337.8746215701103	3	337.873447	1010.59851	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.217	1	17.256	16.756	17.756	1.0392								0	0	0	0.66166	1	6732	6732		0.69767	0.23933	1				8996	5425	4367	4389	10908	10908					0.0936367366560944
GVTQFKRALKK	11	Unmodified	_GVTQFKRALKK_					0	0	0		nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A;ENST00000562028.1_1_15:65988668-65993524:-|nuORF	nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000174485|Q7Z401|DENND4A	MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3986694216728	2	638.398422	1274.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.748	1	47.123	46.623	47.623	1.3751								0	0	0	0.63775	1	19164	19164		0.35063	0	1				8997	4333	4368	4390	10909	10909					0.15589022376434514
GVTRHRSIF	9	Unmodified	_GVTRHRSIF_					0	0	0		nc|ENSG00000214960|A4D126-2|CRPPA;ENSG00000214960|ENST00000407010|CRPPA	nc|ENSG00000214960|A4D126-2|CRPPA	nc|ENSG00000214960|A4D126-2|CRPPA	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2045165896416	3	358.205197	1071.59376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.868	1	21.392	20.892	21.892	1.5237								0	0	0	0.42693	1	8258	8258		1.0715	0	1				8998	5251	4369	4391	10910	10910					0.06082789522838539
GVTVIRGRSS	10	Unmodified	_GVTVIRGRSS_					0	0	0			REV__ENSG00000176387|ENST00000326152|HSD11B2	REV__ENSG00000176387|ENST00000326152|HSD11B2	MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3018066287041	2	516.301447	1030.58834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.831	1	37.133	36.633	37.633	0.30197								0	0	0	0.66176	1	15490	15490		1.4819	0	1		+		8999	11180	4370	4392	10911	10911					0.07427065940373723
GVTWLEYG	8	Unmodified	_GVTWLEYG_					0	0	0		ENST00000425412.1_1_1:231663082-231664218:-|nuORF;ENST00000450783.5_1_1:231658373-231663995:-|nuORF;ENST00000416221.5_1_1:231658373-231664296:-|nuORF;ENST00000454631.1_1_1:231660190-231664218:-|nuORF;ENST00000440665.5_1_1:231658373-231663995:-|nuORF	ENST00000425412.1_1_1:231663082-231664218:-|nuORF	ENST00000425412.1_1_1:231663082-231664218:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1453124880791	2	462.726718	923.438883	1.7485	0.00080909	-0.33307	-0.00015412	1.4155	0.00065498	462.7269403451144	29.401	0.27249	29.68	29.501	29.773	0.2793					10	8	2	0	0	0	2.3239	1	12314	12314		2.5775	0	1	218420			9000	6408	4371	4393	10912	10912					-0.025898794022396032
GVVALFKV	8	Unmodified	_GVVALFKV_					0	0	0		INSC|p.D333Pfs*13|1|0.03|ENSG00000188487|chr11:15221512-15221513|-/CCAGGCA|frameshift_variant;INSC|p.T332Sfs*48|1|0.04|ENSG00000188487|chr11:15221510-15221511|-/GTGCTTGGTGGCATGGT|frameshift_variant;nc|ENSG00000188487|Q1MX18-6|INSC;ENSG00000188487|ENST00000379556|INSC;nc|ENSG00000188487|Q1MX18-5|INSC;nc|ENSG00000188487|Q1MX18|INSC	INSC|p.D333Pfs*13|1|0.03|ENSG00000188487|chr11:15221512-15221513|-/CCAGGCA|frameshift_variant	INSC|p.D333Pfs*13|1|0.03|ENSG00000188487|chr11:15221512-15221513|-/CCAGGCA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	417.2393371462822	2	416.768189	831.521825	1.9006	0.00079211	-4.4715	-0.0018636	-2.5709	-0.0010715	416.76642094227395	69.343	0.3164	70.709	70.53	70.847	1.3657					12	10	2	0	0	0	2.3239	1	29121	29121		0.79363	0	1	1093300			9001	4865	4372	4394	10913	10913					0.09932482116414576
GVVARKGSSL	10	Unmodified	_GVVARKGSSL_					0	0	0			REV__ENST00000475678.5_1_2:219130391-219130901:-|nuORF	REV__ENST00000475678.5_1_2:219130391-219130901:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2938415408134	2	487.293091	972.571629	3.0301	0.0014766	-0.017423	-8.4903E-06	3.0127	0.0014681	487.292767511273	73.444	0.59594	73.769	73.605	74.201	0.32494					27	18	2	0	0	0	0.89646	1	30715	30715		1.8442	1.8442	1	1350300	+		9002	13313	4373	4395	10914	10914					0.08424565054417599
GVVATVLVQ	9	Unmodified	_GVVATVLVQ_					0	0	0			REV__L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|136|2|anti-sense	REV__L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|136|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.2750427126884	2	443.273835	884.533118	2.2639	0.0010035	-1.5361	-0.00068093	0.72772	0.00032258	443.2730890217974	67.972	0.4878	69.35	69.035	69.523	1.3778					42	15	4	0	0	0	0.82604	1	28567	28567		2.3027	0	1	7548800	+		9003	14346	4374	4396	10915	10915					0.08623259419880469
GVVAVNFGKK	10	Unmodified	_GVVAVNFGKK_					0	0	0			REV__tr|A0A553SNW2|A0A553SNW2_NIACIAspartate-semialdehydedehydrogenaseOS=NialliacirculansOX=1397GN=asdPE=3SV=1	REV__tr|A0A553SNW2|A0A553SNW2_NIACIAspartate-semialdehydedehydrogenaseOS=NialliacirculansOX=1397GN=asdPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8058044314384	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	0.89646	1	28999	28999		1.8442	1.0506	1	1556700	+		9004	15065	4375	4397	10916	10916					0.08902039576844345
GVVCCSSC	8	Unmodified	_GVVCCSSC_					0	0	0		ENST00000563829.5_1_15:75145788-75146232:-|nuORF	ENST00000563829.5_1_15:75145788-75146232:-|nuORF	ENST00000563829.5_1_15:75145788-75146232:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	379.1368591189384	2	379.13751	756.260466	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.557	1	23.557	23.057	24.057	0								0	0	0	1.0178	1	9821	9821		0.79363	0	1				9005	7345	4376	4398	10917	10917					-0.12741331908796383
GVVDEGLRYV	10	Unmodified	_GVVDEGLRYV_					0	0	0			REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.7945434451103	2	553.795663	1105.57677	0.84535	0.00046815	-0.34363	-0.0001903	0.50171	0.00027785	553.7956897340458	25.645	0.21514	25.897	25.767	25.982	0.25197					10	6	2	0	0	0	0.89803	1	10709	10709		1.6526	0.17072	1	387580	+		9006	9224	4377	4399	10918	10918					0.02820824126365551
GVVDEGLRYV	10	Unmodified	_GVVDEGLRYV_					0	0	0			REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	553.795663	1105.57677	0.6609	0.00036601	-0.01109	-6.1414E-06	0.64981	0.00035986	553.7958083899522	26.206	0.17996	26.206	26.117	26.297	0	0.15431	0.00019253	NaN	1.6526	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449410	+		9007	9224	4377	4399							0.02820824126365551
GVVDEGLRYV	10	Unmodified	_GVVDEGLRYV_					0	0	0			REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	REV__ENST00000496906.1_1_9:35750742-35753913:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	553.795663	1105.57677	0.84535	0.00046815	-0.34363	-0.0001903	0.50171	0.00027785	553.7956897340458	25.645	0.21514	25.897	25.767	25.982	0.25197	-0.15431	-0.00017579	NaN	1.6526	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387580	+		9008	9224	4377	4399							0.02820824126365551
GVVFLILLP	9	Unmodified	_GVVFLILLP_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2163574099541	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6289	1	10.279	9.7795	10.779	0.65058								0	0	0	0.42693	1	4002	4002		0.26902	0	1		+		9009	11415	4378	4400	10919	10919					0.14026183873147602
GVVFLILLP	9	Unmodified	_GVVFLILLP_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2164794802666	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7404	1	10.391	9.891	10.891	0.65058								0	0	0	0.42693	1	4049	4049		0.26902	0	1		+		9010	11415	4378	4400	10920	10920					0.14026183873147602
GVVFLILLP	9	Unmodified	_GVVFLILLP_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2163879275322	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8694	1	10.52	10.02	11.02	0.65058								0	0	0	0.42693	1	4104	4104		0.26902	0	1		+		9011	11415	4378	4400	10921	10921					0.14026183873147602
GVVFLILLP	9	Unmodified	_GVVFLILLP_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2163268923759	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.449	1	19.428	18.928	19.928	0.97922								0	0	0	0.42693	1	7682	7682		0.26902	0	1		+		9012	11415	4378	4400	10922	10922					0.14026183873147602
GVVFLILLP	9	Unmodified	_GVVFLILLP_					0	0	0			REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	REV__nc|ENSG00000184178|Q8WU76-2|SCFD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2165099978447	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.516	1	20.575	20.075	21.075	1.0585								0	0	0	0.42693	1	8129	8129		0.26902	0	1		+		9013	11415	4378	4400	10923	10923					0.14026183873147602
GVVGWGGG	8	Unmodified	_GVVGWGGG_					0	0	0			REV__ENST00000447266.6_1_6:76311842-76312094:+|nuORF	REV__ENST00000447266.6_1_6:76311842-76312094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	688.3453246951103	1	688.341301	687.334024	2.1842	0.0015035	2.3408	0.0016113	4.525	0.0031147	688.3430510131295	60.289	0.47123	60.617	60.32	60.792	0.32809					21	14	2	0	0	0	0.89176	1	25223	25223		0.79363	0	1	764820	+		9014	13111	4379	4401	10924	10924					-0.022149560881302932
GVVHQLMEK	9	Unmodified	_GVVHQLMEK_					0	0	0			REV__tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	REV__tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.7812377810478	2	520.781502	1039.54845	2.7826	0.0014491	-3.4218	-0.001782	-0.63919	-0.00033288	520.779951636593	89.067	0.51449	89.291	89.036	89.551	0.22359					35	15	3	0	0	0	0.83753	1	37380	37380		1.8442	1.0506	1	794700	+		9015	15120	4380	4402	10925	10925					0.03025802945421674
GVVHQLMEK	9	Unmodified	_GVVHQLMEK_					0	0	0			REV__tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	REV__tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	520.781502	1039.54845	2.7826	0.0014491	-3.4218	-0.001782	-0.63919	-0.00033288	520.779951636593	89.067	0.51449	89.291	89.036	89.551	0.22359	0	0	NaN	1.8442	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	794700	+		9016	15120	4380	4402							0.03025802945421674
GVVIHKVKMGK	11	Unmodified	_GVVIHKVKMGK_					0	0	0			REV__tr|A0A7D7A297|A0A7D7A297_9CLOTCadmiumresistancetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15895PE=4SV=1	REV__tr|A0A7D7A297|A0A7D7A297_9CLOTCadmiumresistancetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15895PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2501403689384	3	399.249638	1194.72708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.988	1	20.511	20.011	21.011	1.5237								0	0	0	0.63775	1	7894	7894		0.45452	0.1855	1		+		9017	15847	4381	4403	10926	10926					0.1375089258431217
GVVKIPLIV	9	Unmodified	_GVVKIPLIV_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MSMS	GG20161007_CRH_Patient100_A02_01	1	469.3289672732353	2	469.325871	936.637189	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.682	1	44.682	44.182	45.182	0								0	0	0	0.42693	1	18699	18699		0.6015	0	1		+		9018	10538	4382	4404	10927	10927					0.1663358624742841
GVVLKLKP	8	Unmodified	_GVVLKLKP_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-6|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;nc|ENSG00000163374|Q9H869-4|YY1AP1;YY1AP1|p.N771Tfs*7|1|0.1|ENSG00000163374|chr1:155659736-155659736|T/-|frameshift_variant;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;ARHGEF2-GON4L|1|fusion;nc|ENSG00000163374|Q9H869-5|YY1AP1;ARHGEF2-GON4L|2|fusion;ARHGEF2-GON4L|3|fusion;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;ENSG00000163374|ENST00000355499|YY1AP1	ENSG00000116580|ENST00000368331|GON4L	ENSG00000116580|ENST00000368331|GON4L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	853.5862914919853	1	853.586951	852.579674	1.2048	0.0010284	-1.9458	-0.0016609	-0.741	-0.00063251	853.5854215939673	109.1	1.0551	109.1	108.64	109.69	0					138	48	4	0	0	0	0.89176	1	47007	47007		0.79363	0	1	126920000			9019	1974	4383	4405	10928	10928					0.14748744041833106
GVVLKLKP	8	Unmodified	_GVVLKLKP_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-6|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;nc|ENSG00000163374|Q9H869-4|YY1AP1;YY1AP1|p.N771Tfs*7|1|0.1|ENSG00000163374|chr1:155659736-155659736|T/-|frameshift_variant;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;ARHGEF2-GON4L|1|fusion;nc|ENSG00000163374|Q9H869-5|YY1AP1;ARHGEF2-GON4L|2|fusion;ARHGEF2-GON4L|3|fusion;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;ENSG00000163374|ENST00000355499|YY1AP1	ENSG00000116580|ENST00000368331|GON4L	ENSG00000116580|ENST00000368331|GON4L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	853.586951	852.579674	2.7864	0.0023784	-3.2158	-0.002745	-0.42947	-0.00036659	853.584276375234	109.16	0.98981	109.21	108.66	109.65	0.048843	-0.0011465	-0.00013907	NaN	0.79363	106	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86984000			9020	1974	4383	4405							0.14748744041833106
GVVLKLKP	8	Unmodified	_GVVLKLKP_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-6|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;nc|ENSG00000163374|Q9H869-4|YY1AP1;YY1AP1|p.N771Tfs*7|1|0.1|ENSG00000163374|chr1:155659736-155659736|T/-|frameshift_variant;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;ARHGEF2-GON4L|1|fusion;nc|ENSG00000163374|Q9H869-5|YY1AP1;ARHGEF2-GON4L|2|fusion;ARHGEF2-GON4L|3|fusion;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;ENSG00000163374|ENST00000355499|YY1AP1	ENSG00000116580|ENST00000368331|GON4L	ENSG00000116580|ENST00000368331|GON4L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	853.586951	852.579674	2.9729	0.0025376	-3.8084	-0.0032508	-0.83551	-0.00071318	853.584276626244	109.07	0.92274	109.23	108.73	109.65	0.15899	0.012537	-0.00064485	NaN	0.79363	100	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91816000			9021	1974	4383	4405							0.14748744041833106
GVVLKLKP	8	Unmodified	_GVVLKLKP_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;nc|ENSG00000163374|Q9H869-6|YY1AP1;ENST00000436865.5_1_1:155629450-155649007:-|nuORF;nc|ENSG00000163374|Q9H869-4|YY1AP1;YY1AP1|p.N771Tfs*7|1|0.1|ENSG00000163374|chr1:155659736-155659736|T/-|frameshift_variant;nc|ENSG00000163374|Q9H869-3|YY1AP1;nc|ENSG00000163374|Q9H869-7|YY1AP1;nc|ENSG00000163374|Q9H869|YY1AP1;nc|ENSG00000163374|Q9H869-8|YY1AP1;nc|ENSG00000163374|Q9H869-9|YY1AP1;ARHGEF2-GON4L|1|fusion;nc|ENSG00000163374|Q9H869-5|YY1AP1;ARHGEF2-GON4L|2|fusion;ARHGEF2-GON4L|3|fusion;ENST00000442834.6_1_1:155629450-155640310:-|nuORF;ENSG00000163374|ENST00000355499|YY1AP1	ENSG00000116580|ENST00000368331|GON4L	ENSG00000116580|ENST00000368331|GON4L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	853.586951	852.579674	3.0753	0.002625	-4.0678	-0.0034722	-0.99256	-0.00084724	853.5837752727715	109.17	0.89985	109.32	108.77	109.67	0.1548	0.10742	-0.00086632	NaN	0.79363	93	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47967000			9022	1974	4383	4405							0.14748744041833106
GVVLRALDPAL	11	Unmodified	_GVVLRALDPAL_					0	0	0		ENST00000527067.1_1_8:146228418-146228628:+|nuORF	ENST00000527067.1_1_8:146228418-146228628:+|nuORF	ENST00000527067.1_1_8:146228418-146228628:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3446533083916	2	562.345323	1122.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.88	1	73.704	73.204	74.204	1.824								0	0	0	0.63775	1	30155	30155		3.2813	0	1				9023	7129	4384	4406	10929	10929					0.11966266811100468
GVVQKARRRH	10	Unmodified	_GVVQKARRRH_					0	0	0		ENST00000507952.1_1_10:75490478-75490948:+|nuORF	ENST00000507952.1_1_10:75490478-75490948:+|nuORF	ENST00000507952.1_1_10:75490478-75490948:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1800109744072	3	402.914528	1205.72176	1.6841	0.00067854	0.69637	0.00028058	2.3804	0.00095911	402.9150653795987	39.86	0.24736	41.722	41.584	41.831	1.8624					10	7	2	0	0	0	0.12559	1	16664	16664		0.77653	0.61721	1	1027600			9024	7015	4385	4407	10930	10930					0.12712349836738213
GVVRMKGLW	9	Unmodified	_GVVRMKGLW_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3055908083916	2	523.302404	1044.59026	1.4904	0.00077995	2.4425	0.0012782	3.9329	0.0020581	523.3038467566931	70.036	2.0531	70.359	69.344	71.397	0.32224					160	65	3	0	0	0	0.82604	1	28968	28968		2.3027	0.82083	1	4121700			9025	7947	4386	4408	10931	10931					0.06974403424624143
GVVRMKGLW	9	Unmodified	_GVVRMKGLW_					0	0	0		nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	nc|ENSG00000185332|Q8N8V8|TMEM105	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3059570193291	2	523.302404	1044.59026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.209	1	67.532	67.032	68.032	0.32269								0	0	0	0.42693	1	28139	28139		2.3027	0.4585	1				9026	7947	4386	4408	10932	10932					0.06974403424624143
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.7726623415947	2	470.771794	939.529036	1.5165	0.00071395	1.1713	0.00055141	2.6878	0.0012654	470.7722819353935	23.763	0.18645	24.005	23.917	24.104	0.24251					9	5	2	0	0	0	0.89008	1	9914	9914		2.5775	0.27475	1	452870			9027	7955	4387	4409	10933	10933					0.056852147168342526
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.7735473513603	2	470.771794	939.529036	1.5364	0.0007233	0.36591	0.00017226	1.9023	0.00089556	470.7720203059509	24.091	0.30599	24.334	24.227	24.533	0.24251					14	9	2	0	0	0	0.89008	1	10058	10058		2.5775	0.27475	1	569580			9028	7955	4387	4409	10934	10934					0.056852147168342526
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7737609744072	2	470.771794	939.529036	1.3538	0.00063731	1.0728	0.00050505	2.4266	0.0011424	470.7725071005839	22.749	0.18096	23.963	23.859	24.04	1.2145					9	5	2	0	0	0	0.89008	1	9502	9502		2.5775	0.27475	1	800690			9029	7955	4387	4409	10935	10935					0.056852147168342526
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7724487185478	2	470.771794	939.529036	1.396	0.00065719	0.90201	0.00042464	2.298	0.0010818	470.7722410016322	23.066	0.30853	24.281	24.103	24.412	1.2145					16	9	2	0	0	0	0.89008	2	9618	9618;9670		2.5775	0.27475	1	454200			9030	7955	4387	4409	10936;10937	10936					0.056852147168342526
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7724182009697	2	470.771794	939.529036	0.86024	0.00040498	2.0131	0.0009477	2.8733	0.0013527	470.7724567156519	22.336	0.2104	23.952	23.831	24.041	1.6158					12	6	3	0	0	0	0.89008	1	9319	9319		2.5775	0.51773	1	533250			9031	7955	4387	4409	10938	10938					0.056852147168342526
GVVRNPLW	8	Unmodified	_GVVRNPLW_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	470.771794	939.529036	0.87212	0.00041057	1.2517	0.00058928	2.1239	0.00099985	470.7725060022819	22.678	0.26726	24.329	24.169	24.436	1.6511	0.01429	0.00046005	NaN	2.5775	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	340060			9032	7955	4387	4409							0.056852147168342526
GVVRRRIGVGG	11	Unmodified	_GVVRRRIGVGG_					0	0	0			REV__ENST00000394518.6_1_15:86292214-86292364:+|nuORF	REV__ENST00000394518.6_1_15:86292214-86292364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3530151247978	2	563.351806	1124.68906	1.8611	0.0010484	-0.46538	-0.00026217	1.3957	0.00078627	563.3514764376096	83.287	1.0447	83.287	82.892	83.937	0					66	33	3	0	0	0	1.0362	1	34784	34784		1.3295	0.72803	1	1643900	+		9033	12829	4388	4410	10939	10939					0.13170142713875066
GVVSEKAKVEV	11	Unmodified	_GVVSEKAKVEV_					0	0	0			REV__ENST00000531401.5_1_11:64850926-64851618:-|nuORF	REV__ENST00000531401.5_1_11:64850926-64851618:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	382.2245971560478	3	382.223923	1143.64994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.285	1	93.221	92.721	93.721	0.93623								0	0	0	0.63775	1	38864	38864		1.3296	0	1		+		9034	13710	4389	4411	10940	10940					0.08385952848971101
GVVSLLLPRLE	11	Unmodified	_GVVSLLLPRLE_					0	0	0		ENST00000459976.2_1_3:49002373-49005591:+|nuORF	ENST00000459976.2_1_3:49002373-49005591:+|nuORF	ENST00000459976.2_1_3:49002373-49005591:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2504455447197	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.865	1	23.481	22.981	23.981	1.6158								0	0	0	0.63775	1	9122	9122		0.50596	0.23694	1				9035	6664	4390	4412	10941	10941					0.14403109016711824
GVVTMLLMVI	10	Unmodified	_GVVTMLLMVI_					0	0	0			REV__ENSG00000135973|ENST00000258456|GPR45	REV__ENSG00000135973|ENST00000258456|GPR45	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.2815429568291	2	538.316331	1074.61811	2.2785	0.0012265	1.7878	0.0009624	4.0663	0.002189	538.3178375870303	71.529	0.60332	72.871	72.333	72.936	1.3415					34	19	2	0	0	0	0.12351	1	29829	29829		26.884	7.6267	1	1135000	+		9036	9966	4391	4413	10942	10942					0.08378545569848939
GVVTMLLMVI	10	Unmodified	_GVVTMLLMVI_					0	0	0			REV__ENSG00000135973|ENST00000258456|GPR45	REV__ENSG00000135973|ENST00000258456|GPR45	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	538.316331	1074.61811	1.1221	0.00060404	3.8565	0.002076	4.9786	0.00268	538.3188304051212	70.971	0.57509	72.795	72.335	72.91	1.824	-0.037969	0.0010594	NaN	20.454	39	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1042500	+		9037	9966	4391	4413							0.08378545569848939
GVVVAPVN	8	Unmodified	_GVVVAPVN_					0	0	0			REV__ENST00000423172.6_1_17:7489353-7495764:+|nuORF	REV__ENST00000423172.6_1_17:7489353-7495764:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4444457888603	1	754.445766	753.438489	1.8833	0.0014208	-2.0454	-0.0015431	-0.16211	-0.0001223	754.443782634839	64.121	0.56931	64.45	64.056	64.626	0.32899					25	17	2	0	0	0	0.88958	1	26817	26817		2.8892	0	1	1029700	+		9038	9752	4392	4414	10943	10943					0.05190745668562613
GVVVEKLEV	9	Unmodified	_GVVVEKLEV_					0	0	0			REV__nc|ENSG00000185324|Q15131-4|CDK10	REV__nc|ENSG00000185324|Q15131-4|CDK10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2926818728447	2	486.292225	970.569897	1.9678	0.00095693	0.47456	0.00023078	2.4424	0.0011877	486.29286942125054	43.519	0.27485	44.872	44.735	45.01	1.3536					16	8	3	0	0	0	0.23535	1	18251	18251		29.082	0	1	800330	+		9039	14507	4393	4415	10944	10944					0.08343511245811897
GVVVEKLEV	9	Unmodified	_GVVVEKLEV_					0	0	0			REV__nc|ENSG00000185324|Q15131-4|CDK10	REV__nc|ENSG00000185324|Q15131-4|CDK10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	486.292225	970.569897	1.9678	0.00095693	0.47456	0.00023078	2.4424	0.0011877	486.29286942125054	43.519	0.27485	44.872	44.735	45.01	1.3536	0.0043376	0.00018362	NaN	29.082	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	800330	+		9040	14507	4393	4415							0.08343511245811897
GVVVFVCHLV	10	Unmodified	_GVVVFVCHLV_					0	0	0			REV__L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|71|1|anti-sense	REV__L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|71|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3074828982353	2	536.304613	1070.59467	2.1785	0.0011683	-1.7111	-0.00091768	0.46736	0.00025065	536.3041551906354	43.036	1.9062	44.957	44.694	46.6	1.9211					100	61	3	0	0	0	0.84024	1	17974	17974		7.9102	1.7044	1	3738100	+		9041	14293	4394	4416	10945	10945					0.0621986784751698
GVVVKVPG	8	Unmodified	_GVVVKVPG_					0	0	0			REV__ENSG00000155660|ENST00000652332|PDIA4	REV__ENSG00000155660|ENST00000652332|PDIA4	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7464477419853	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.075	1	68.464	67.964	68.964	1.3888								0	0	0	1.0178	1	28137	28137		2.8892	0.31174	1		+		9042	10497	4395	4417	10946	10946					0.0882762256528622
GVVVKVPG	8	Unmodified	_GVVVKVPG_					0	0	0			REV__ENSG00000155660|ENST00000652332|PDIA4	REV__ENSG00000155660|ENST00000652332|PDIA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7462036013603	2	377.744714	753.474875	2.3343	0.00088176	1.9497	0.00073647	4.2839	0.0016182	377.74521705315453	69.897	1.4148	71.735	70.783	72.198	1.8378					61	44	2	0	0	0	0.88958	1	29304	29304		2.8892	0.31174	1	6872900	+		9043	10497	4395	4417	10947	10947					0.0882762256528622
GVVVWVPFVP	10	Unmodified	_GVVVWVPFVP_					0	0	0			REV__nc|ENSG00000197965|O95297-3|MPZL1	REV__nc|ENSG00000197965|O95297-3|MPZL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	366.4819518923759	3	366.883061	1097.62735	-1.0754	-0.00039455	-0.22989	-8.4342E-05	-1.3053	-0.00047889	366.8832752029091	33.226	0.31774	33.226	33.103	33.421	0					15	10	2	0	0	0	0.12513	1	13944	13944		2.086	0	1	348460	+		9044	11695	4396	4418	10948	10948					0.0824439824205001
GVVWKLHSDC	10	Unmodified	_GVVWKLHSDC_					0	0	0		ENST00000593460.1_1_19:18120319-18120565:+|nuORF	ENST00000593460.1_1_19:18120319-18120565:+|nuORF	ENST00000593460.1_1_19:18120319-18120565:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.2886840701103	2	572.284408	1142.55426	2.5707	0.0014712	3.0066	0.0017206	5.5773	0.0031918	572.2859783817144	44.613	0.63052	45.978	45.738	46.369	1.3653					39	19	3	0	0	0	0.846	1	18749	18749		7.2892	2.0586	1	5466600			9045	7503	4397	4419	10949	10949					-0.011310985428735876
GVVYFILTVI	10	Unmodified	_GVVYFILTVI_					0	0	0		tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3448974490166	2	562.341718	1122.66888	1.3693	0.00077	3.2938	0.0018522	4.663	0.0026222	562.3431954195366	70.866	1.0717	71.19	70.679	71.751	0.32359					54	33	3	0	0	0	0.89646	1	29673	29673		1.8442	0.19162	1	1190300			9046	16757	4398	4420	10950	10950					0.11245534210684127
GVVYGRGH	8	Unmodified	_GVVYGRGH_					0	0	0		ENST00000446295.1_1_X:47372487-47372766:-|nuORF	ENST00000446295.1_1_X:47372487-47372766:-|nuORF	ENST00000446295.1_1_X:47372487-47372766:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.7265502810478	2	422.724844	843.435135	1.0572	0.00044692	2.8108	0.0011882	3.8681	0.0016351	422.7261293299671	46.756	0.26646	46.756	46.596	46.863	0					13	8	2	0	0	0	0.88958	1	19542	19542		2.8892	0	1	535870			9047	6584	4399	4421	10951	10951					0.007154956145541291
GVWCHEDK	8	Unmodified	_GVWCHEDK_					0	0	0			REV__SGSM3|p.E521G|1|0.29|ENSG00000100359|chr22:40407826-40407826|A/G|missense_variant	REV__SGSM3|p.E521G|1|0.29|ENSG00000100359|chr22:40407826-40407826|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2122375369072	2	487.213452	972.412351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9703	1	9.9703	9.4703	10.47	0								0	0	0	1.0178	1	4107	4107		5.7604	0	1		+		9048	8987	4400	4422	10952	10952					-0.0749589156522461
GVWGLILGIP	10	Unmodified	_GVWGLILGIP_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2125427126884	3	342.211177	1023.6117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.047	1	19.24	18.74	19.74	0.19342								0	0	0	0.66155	1	7909	7909		0.77653	0.31819	1				9049	16129	4401	4423	10953	10953					0.10084111724984268
GVWGLILGIP	10	Unmodified	_GVWGLILGIP_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2124206423759	3	342.211177	1023.6117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.453	1	19.647	19.147	20.147	0.19342								0	0	0	0.66155	1	8081	8081		0.77653	0.31819	1				9050	16129	4401	4423	10954	10954					0.10084111724984268
GVWGLILGIP	10	Unmodified	_GVWGLILGIP_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2128478884697	3	342.211177	1023.6117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.072	1	20.131	19.631	20.631	1.0585								0	0	0	0.66155	1	7947	7947		0.77653	0.31819	1				9051	16129	4401	4423	10955	10955					0.10084111724984268
GVWHGAPG	8	Unmodified	_GVWHGAPG_					0	0	0		ENST00000496425.1_1_20:62373927-62374363:+|nuORF;ENST00000473157.1_1_20:62373310-62374363:+|nuORF	ENST00000496425.1_1_20:62373927-62374363:+|nuORF	ENST00000496425.1_1_20:62373927-62374363:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	390.6916992068291	2	390.693013	779.371472	-1.0477	-0.00040934	-1.2658	-0.00049453	-2.3135	-0.00090387	390.6923300497203	18.377	1.2668	18.377	17.81	19.077	0					102	43	3	0	0	0	0.88409	1	7564	7564		6.3541	3.4649	1	10037000			9052	6764	4402	4424	10956	10956					-0.027038648225357065
GVWKSDPK	8	Unmodified	_GVWKSDPK_					0	0	0		nc|ENSG00000100354|Q9UPQ9-1|TNRC6B;TNRC6B|p.Q1753Rfs*11|1|0.24|ENSG00000100354|chr22:40322995-40322995|C/-|frameshift_variant;ENSG00000100354|ENST00000454349|TNRC6B	nc|ENSG00000100354|Q9UPQ9-1|TNRC6B	nc|ENSG00000100354|Q9UPQ9-1|TNRC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1683837771416	3	306.167749	915.481417	-0.63881	-0.00019558	0.76262	0.00023349	0.12381	3.7905E-05	306.16810135326836	10.787	0.16308	11.548	11.42	11.584	0.76165					10	7	2	0	0	0	0.87935	1	4487	4487		6.7232	2.7788	1	314450			9053	1268	4403	4425	10957	10957					0.020295157259852203
GVWSVVLLL	9	Unmodified	_GVWSVVLLL_					0	0	0			REV__nc|ENSG00000254769|Q8NGN8|OR4A4P	REV__nc|ENSG00000254769|Q8NGN8|OR4A4P	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.3243286013603	3	329.207544	984.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.23	1	13.23	12.73	13.73	0								0	0	0	0.42693	1	5481	5481		0.26902	0	1		+		9054	14554	4404	4426	10958	10958					0.10788709350720183
GVWTNRKRPR	10	Unmodified	_GVWTNRKRPR_					0	0	0		ENST00000301071.11_1_12:49582839-49582968:-|nuORF	ENST00000301071.11_1_12:49582839-49582968:-|nuORF	ENST00000301071.11_1_12:49582839-49582968:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	635.3675414919853	2	635.367987	1268.72142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.782	1	19.23	18.73	19.73	1.448								0	0	0	0.66237	1	7387	7387		0.45834	0	1				9055	5759	4405	4427	10959	10959					0.09780930116880882
GVWTVHKRF	9	Unmodified	_GVWTVHKRF_					0	0	0			REV__chr11:65856381-65858097|127|11.18|0.65|4.11|-|2|None,CFL1|1	REV__chr11:65856381-65858097|127|11.18|0.65|4.11|-|2|None,CFL1|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2151367068291	3	377.213692	1128.61925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.362	1	29.641	29.141	30.141	1.2789								0	0	0	0.42693	1	11890	11890		1.1933	0.41681	1		+		9056	8239	4406	4428	10960	10960					0.060082640452719716
GVWVRTKQQK	10	Unmodified	_GVWVRTKQQK_					0	0	0		tr|A0A553SUK9|A0A553SUK9_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_00840PE=4SV=1	tr|A0A553SUK9|A0A553SUK9_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_00840PE=4SV=1	tr|A0A553SUK9|A0A553SUK9_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_00840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	615.3613159060478	2	615.359296	1228.70404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.276	1	52.602	52.102	53.102	0.32553								0	0	0	0.66237	1	21902	21902		0.45834	0	1				9057	16697	4407	4429	10961	10961					0.0988358979120676
GVWWPDMH	8	Unmodified	_GVWWPDMH_					0	0	0		nc|ENSG00000124299|P12955-3|PEPD;nc|ENSG00000124299|P12955-2|PEPD;ENSG00000124299|ENST00000244137|PEPD	nc|ENSG00000124299|P12955-3|PEPD	nc|ENSG00000124299|P12955-3|PEPD	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.3026916384697	3	343.153334	1026.43817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9624	1	8.9624	8.4624	9.4624	0								0	0	0	1.0178	1	3688	3688		0.45834	0.057624	1				9058	2223	4408	4430	10962	10962					-0.07398997322957257
GVWWQRVR	8	Unmodified	_GVWWQRVR_					0	0	0			REV__ENST00000496700.5_1_14:105954396-105954633:+|nuORF	REV__ENST00000496700.5_1_14:105954396-105954633:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2532531619072	3	362.870037	1085.58828	0.82063	0.00029778	1.064	0.00038611	1.8847	0.00068389	362.8705605032373	28.771	0.45991	29.05	28.8	29.26	0.27929					20	14	2	0	0	0	2.3239	1	11941	11941		0	0	1	368170	+		9059	13469	4409	4431	10963	10963					0.04891110731023218
GVWWQRVR	8	Unmodified	_GVWWQRVR_					0	0	0			REV__ENST00000496700.5_1_14:105954396-105954633:+|nuORF	REV__ENST00000496700.5_1_14:105954396-105954633:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2532531619072	3	362.870037	1085.58828	-0.054506	-1.9778E-05	1.0184	0.00036953	0.96386	0.00034975	362.87034169175183	27.547	0.37275	28.826	28.625	28.998	1.2789					16	11	2	0	0	0	2.3239	1	11589	11589		0.45834	0	1	388430	+		9060	13469	4409	4431	10964	10964					0.04891110731023218
GVWYWYLRQMH	11	Unmodified	_GVWYWYLRQMH_					0	0	0		ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.5813476443291	3	513.583568	1537.72887	0.66526	0.00034167	-3.7942	-0.0019486	-3.1289	-0.001607	513.5815190603462	18.664	0.24506	18.837	18.751	18.997	0.17285					10	7	2	0	0	0	1.0357	1	7753	7753		1.4551	1.0006	1	560250			9061	7562	4410	4432	10965	10965					-0.018480983977269716
GVWYWYLRQMH	11	Unmodified	_GVWYWYLRQMH_					0	0	0		ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	513.583568	1537.72887	0.8141	0.00041811	-4.1487	-0.0021307	-3.3346	-0.0017126	513.5817278068196	17.855	0.25871	18.834	18.766	19.024	0.97922	0.0051212	0.00053324	NaN	1.4551	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330850			9062	7562	4410	4432							-0.018480983977269716
GVWYWYLRQMH	11	Unmodified	_GVWYWYLRQMH_					0	0	0		ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	ENST00000606723.2_1_6:25998815-25999043:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	513.583568	1537.72887	0.65548	0.00033664	-5.7537	-0.002955	-5.0982	-0.0026183	513.5809224273353	17.514	0.12029	18.816	18.75	18.87	1.3023	-0.012848	-0.0019397	NaN	1.4551	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227440			9063	7562	4410	4432							-0.018480983977269716
GVYEFWIEK	9	Unmodified	_GVYEFWIEK_					0	0	0			REV__tr|A0A553SK11|A0A553SK11_NIACICvpAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17985PE=4SV=1	REV__tr|A0A553SK11|A0A553SK11_NIACICvpAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17985PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2841674685478	3	390.865847	1169.57571	0.19976	7.8079E-05	-2.8305	-0.0011063	-2.6307	-0.0010283	391.1984963178745	19.635	0.15014	21.159	21.045	21.196	1.5237					5	4	2	0	0	0	0.11901	1	8135	8135		2.7352	0.23671	1	147160	+		9064	14928	4411	4433	10966	10966					-0.00229390242543559
GVYEKLDVR	9	Unmodified	_GVYEKLDVR_					0	0	0			REV__ENST00000460579.5_1_2:219527197-219528106:+|nuORF	REV__ENST00000460579.5_1_2:219527197-219528106:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2018005251884	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.646	1	13.433	12.933	13.933	0.78751								0	0	0	0.42693	1	5246	5246		1.0715	0	1		+		9065	8751	4412	4434	10967	10967					0.0461712798901317
GVYINKQEK	9	Unmodified	_GVYINKQEK_					0	0	0			REV__tr|A0A7D6ZVT4|A0A7D6ZVT4_9CLOTYncEfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14940PE=4SV=1	REV__tr|A0A7D6ZVT4|A0A7D6ZVT4_9CLOTYncEfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14940PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2022888064384	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.753	1	13.447	12.947	13.947	0.69396								0	0	0	0.42693	1	5296	5296		1.0715	0	1		+		9066	15736	4413	4435	10968	10968					0.0461712798901317
GVYINKQEK	9	Unmodified	_GVYINKQEK_					0	0	0			REV__tr|A0A7D6ZVT4|A0A7D6ZVT4_9CLOTYncEfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14940PE=4SV=1	REV__tr|A0A7D6ZVT4|A0A7D6ZVT4_9CLOTYncEfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14940PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.1999999880791	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.249	1	13.976	13.476	14.476	0.72639								0	0	0	0.42693	1	5501	5501		1.0715	0	1		+		9067	15736	4413	4435	10969	10969					0.0461712798901317
GVYMRFMRSHK	11	Unmodified	_GVYMRFMRSHK_					0	0	0		ENST00000488258.5_1_7:151265789-151372578:-|nuORF;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;GBX1-PRKAG2|1|fusion;ENSG00000106617|ENST00000287878|PRKAG2;ENST00000483775.1_1_7:151273415-151329218:-|nuORF;ENST00000491938.5_1_7:151269720-151329218:-|nuORF	ENST00000488258.5_1_7:151265789-151372578:-|nuORF	ENST00000488258.5_1_7:151265789-151372578:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2419616580009	3	471.241036	1410.70128	1.0471	0.00049344	-0.62752	-0.00029571	0.41958	0.00019772	471.2410135505491	14.019	0.21212	14.019	13.887	14.1	0					10	6	2	0	0	0	1.0191	1	5827	5827		2.6312	0	1	381810			9068	1575	4414	4436	10970	10970					0.01235675070392972
GVYRCDYC	8	Unmodified	_GVYRCDYC_					0	0	0		tr|A0A7D7A653|A0A7D7A653_9CLOTAspartatecarbamoyltransferaseregulatorysubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_08990PE=4SV=1	tr|A0A7D7A653|A0A7D7A653_9CLOTAspartatecarbamoyltransferaseregulatorysubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_08990PE=4SV=1	tr|A0A7D7A653|A0A7D7A653_9CLOTAspartatecarbamoyltransferaseregulatorysubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_08990PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	489.6942016482353	2	489.694038	977.373522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.68	1	111.84	111.34	112.34	0.16445								0	0	0	1.0178	1	48464	48464		0.79363	0	1				9069	17304	4415	4437	10971	10971					-0.11606940191245485
GVYVKKKRR	9	Unmodified	_GVYVKKKRR_					0	0	0			REV__ENST00000486056.1_1_9:35733177-35736720:+|nuORF	REV__ENST00000486056.1_1_9:35733177-35736720:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3652221560478	2	567.366924	1132.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.564	1	48.564	48.064	49.064	0								0	0	0	0.42693	1	20282	20282		0.6015	0.076735	1		+		9070	9223	4416	4438	10972	10972					0.15824501379074718
GVYWFYNKK	9	Unmodified	_GVYWFYNKK_					0	0	0		tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	602.8151122927666	2	602.811116	1203.60768	2.0602	0.0012419	4.0281	0.0024282	6.0883	0.0036701	602.8133147036258	40.97	0.35036	40.97	40.731	41.081	0					18	10	2	0	0	0	0.83213	1	17102	17102		2.0598	0.40713	1	1027900			9071	17297	4417	4439	10973	10973					0.014020222312637998
GVYWFYNKK	9	Unmodified	_GVYWFYNKK_					0	0	0		tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	tr|A0A7D7A5E0|A0A7D7A5E0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_06870PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1794921755791	3	402.209836	1203.60768	-0.72409	-0.00029123	-0.62693	-0.00025216	-1.351	-0.00054339	402.20928598759014	18.222	0.5881	18.222	18.119	18.708	0					26	21	2	0	0	0	0.11901	1	7631	7631		1.0715	0.67075	1	868420			9072	17297	4417	4439	10974	10974					0.014020222312637998
GVYYEQYWEYM	11	Unmodified	_GVYYEQYWEYM_					0	0	0			REV__ENSG00000115365|ENST00000450366|LANCL1	REV__ENSG00000115365|ENST00000450366|LANCL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	511.2470580935478	3	510.879716	1529.61732	0.4833	0.00024691	-1.6336	-0.00083455	-1.1503	-0.00058765	510.8787580993811	15.052	0.4067	15.821	15.674	16.081	0.76937					14	12	2	0	0	0	0.14606	1	6300	6300		0.50596	0.36606	1	298890	+		9073	9436	4418	4440	10975	10975					-0.12630622336155284
GVYYLHSL	8	Unmodified	_GVYYLHSL_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1;ENST00000469067.5_1_9:90113992-90265069:+|nuORF	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1997253298759	2	476.25036	950.486168	3.4195	0.0016285	-0.076555	-3.6459E-05	3.3429	0.0015921	476.2496728909814	81.395	0.33952	82.628	82.378	82.718	1.2332					15	10	2	0	0	0	2.3239	1	34141	34141		2.5775	0	1	664970			9074	4962	4419	4441	10976	10976					0.00894399868752771
GVYYLHSL	8	Unmodified	_GVYYLHSL_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1;ENST00000469067.5_1_9:90113992-90265069:+|nuORF	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1994506716728	2	476.25036	950.486168	2.6177	0.0012467	1.2732	0.00060634	3.8909	0.001853	476.24956292800033	80.898	0.21516	82.594	82.456	82.671	1.6959					11	6	2	0	0	0	2.3239	1	33917	33917		0.69038	0	1	1566900			9075	4962	4419	4441	10977	10977					0.00894399868752771
GWGAPATPRRR	11	Unmodified	_GWGAPATPRRR_					0	0	0			REV__ENST00000383811.7_1_3:9975536-9975776:+|nuORF	REV__ENST00000383811.7_1_3:9975536-9975776:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.8452636599541	2	612.839062	1223.66357	2.9774	0.0018246	0.38367	0.00023513	3.361	0.0020598	613.3415827818061	87.006	0.85252	87.006	86.581	87.434	0					231	34	7	0	0	0	1.0362	1	36341	36341		1.3295	0.72803	1	184780000	+		9076	12788	4420	4442	10978	10978					0.06068668191460347
GWMEISHTF	9	Unmodified	_GWMEISHTF_					0	0	0		ENSG00000116661|ENST00000354287|FBXO2	ENSG00000116661|ENST00000354287|FBXO2	ENSG00000116661|ENST00000354287|FBXO2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	554.7892944216728	2	554.250034	1106.48552	1.5142	0.00083926	-0.011781	-6.5298E-06	1.5024	0.00083273	554.250739130569	54.742	0.30703	56.146	55.995	56.302	1.4048					14	9	2	0	0	0	0.0049099	1	22900	22900		70.716	52.581	1	1165400			9077	1976	4421	4443	10979	10979					-0.06346762842599674
GWMEISHTF	9	Unmodified	_GWMEISHTF_					0	0	0		ENSG00000116661|ENST00000354287|FBXO2	ENSG00000116661|ENST00000354287|FBXO2	ENSG00000116661|ENST00000354287|FBXO2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.7900268435478	2	554.250034	1106.48552	1.9284	0.0010688	-0.58506	-0.00032427	1.3433	0.00074455	554.2501208834836	54.293	0.28154	56.262	56.127	56.409	1.9684					14	8	2	0	0	0	0.040432	1	22727	22727		50.855	26.181	1	1389800			9078	1976	4421	4443	10980	10980					-0.06346762842599674
GWPHKQRL	8	Unmodified	_GWPHKQRL_					0	0	0		ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1955139040947	3	341.194521	1020.56173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.402	1	86.402	85.902	86.902	0								0	0	0	1.0178	1	36007	36007		0.45834	0	1				9079	6254	4422	4444	10981	10981					0.05227421839708768
GWPHKQRL	8	Unmodified	_GWPHKQRL_					0	0	0		ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1953918337822	3	341.194521	1020.56173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.616	1	93.761	93.261	94.261	0.14493								0	0	0	1.0178	1	39187	39187		0.45834	0	1				9080	6254	4422	4444	10982	10982					0.05227421839708768
GWPHKQRL	8	Unmodified	_GWPHKQRL_					0	0	0		ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.1962463259697	3	341.194521	1020.56173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.87	1	93.741	93.241	94.241	0.87176								0	0	0	1.0178	1	39096	39096		0.45834	0	1				9081	6254	4422	4444	10983	10983					0.05227421839708768
GWPHKQRL	8	Unmodified	_GWPHKQRL_					0	0	0		ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	ENST00000392011.6_1_2:235963415-235963535:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.1958495974541	3	341.194521	1020.56173	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.343	1	93.67	93.17	94.17	1.3269								0	0	0	1.0178	1	38872	38872		0.45834	0	1				9082	6254	4422	4444	10984	10984					0.05227421839708768
GWPWNTFN	8	Unmodified	_GWPWNTFN_					0	0	0		ENST00000283534.4_2_14:93652711-93652795:+|nuORF	ENST00000283534.4_2_14:93652711-93652795:+|nuORF	ENST00000283534.4_2_14:93652711-93652795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.2235290408134	3	341.155732	1020.44537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.256	1	53.578	53.078	54.078	0.32283								0	0	0	1.0178	1	22309	22309		0.45834	0.057624	1				9083	5708	4423	4445	10985	10985					-0.06403941450855655
GWPWNTFN	8	Unmodified	_GWPWNTFN_					0	0	0		ENST00000283534.4_2_14:93652711-93652795:+|nuORF	ENST00000283534.4_2_14:93652711-93652795:+|nuORF	ENST00000283534.4_2_14:93652711-93652795:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.1578246951103	3	341.155732	1020.44537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.058	1	54.03	53.53	54.53	1.9722								0	0	0	1.0178	1	21815	21815		0.45834	0.057624	1				9084	5708	4423	4445	10986	10986					-0.06403941450855655
GWQYNPGDRH	10	Unmodified	_GWQYNPGDRH_					0	0	0			REV__SEMA3A|p.V367G|1|0.34|ENSG00000075213|chr7:84007393-84007393|A/C|missense_variant	REV__SEMA3A|p.V367G|1|0.34|ENSG00000075213|chr7:84007393-84007393|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.5197021365166	3	410.519733	1228.53737	-0.79654	-0.00032699	-1.8008	-0.00073928	-2.5974	-0.0010663	410.5186837761138	10.079	0.65051	10.079	9.9375	10.588	0					32	20	2	0	0	0	0.85617	1	4134	4134		6.1918	1.663	1	1001400	+		9085	14616	4424	4446	10987	10987					-0.06775883104478453
GWRRRRWRRRL	11	Unmodified	_GWRRRRWRRRL_					0	0	0		ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.8262817263603	3	552.001442	1652.9825	2.0237	0.0011171	2.8945	0.0015978	4.9182	0.0027149	552.3366146164774	63.819	0.25686	65.226	65.112	65.368	1.4071					16	7	3	0	0	0	0.14606	1	26721	26721		0	0	1	534760			9086	7526	4425	4447	10988	10988					0.18212354607271664
GWRRRRWRRRL	11	Unmodified	_GWRRRRWRRRL_					0	0	0		ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	552.001442	1652.9825	1.3783	0.00076081	4.3875	0.0024219	5.7658	0.0031827	552.3385053755347	65.665	0.29123	65.665	65.546	65.837	0	0.29115	0.0017642	NaN	0.094841	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	882660			9087	7526	4425	4447							0.18212354607271664
GWRRRRWRRRL	11	Unmodified	_GWRRRRWRRRL_					0	0	0		ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	552.001442	1652.9825	1.8858	0.001041	3.4381	0.0018979	5.3239	0.0029388	552.337817065911	65.083	0.32137	65.41	65.226	65.548	0.32689	0.036587	0.00019199	NaN	0.094841	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	849480			9088	7526	4425	4447							0.18212354607271664
GWRRRRWRRRL	11	Unmodified	_GWRRRRWRRRL_					0	0	0		ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	552.001442	1652.9825	2.2707	0.0012534	1.382	0.00076285	3.6526	0.0020163	552.3361566332405	63.249	0.28691	65.193	65.058	65.345	1.9444	-0.18004	-0.003213	NaN	0.094841	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	529460			9089	7526	4425	4447							0.18212354607271664
GWVRLLQR	8	Unmodified	_GWVRLLQR_					0	0	0			REV__ENSG00000275793|ENST00000619918|RIMBP3	REV__ENSG00000275793|ENST00000619918|RIMBP3	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.2117187380791	3	343.210171	1026.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.78	1	100.98	100.48	101.48	0.20527								0	0	0	1.0178	1	42376	42376		0.45834	0.057624	1		+		9090	11382	4426	4448	10989	10989					0.0964428139084248
GWYDEEHPLVF	11	Unmodified	_GWYDEEHPLVF_					0	0	0		MED1-CLPB|1|fusion;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078-3|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB	MED1-CLPB|1|fusion	MED1-CLPB|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	696.3188354372978	2	696.31696	1390.61937	2.4487	0.001705	-0.35761	-0.00024901	2.0911	0.001456	696.316587829605	65.375	0.52392	66.774	66.54	67.064	1.3989					58	16	5	0	0	0	0.0014353	3	27420	27368;27420;27473		160.52	137.78	1	18016000			9091	3607	4427	4449	10990;10991;10992	10991					-0.060318255360471085
GWYDEEHPLVF	11	Unmodified	_GWYDEEHPLVF_					0	0	0		MED1-CLPB|1|fusion;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078-3|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB	MED1-CLPB|1|fusion	MED1-CLPB|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	696.3181030154228	2	696.31696	1390.61937	1.1344	0.00078987	0.23937	0.00016668	1.3737	0.00095655	696.317079614034	64.981	0.65279	66.89	66.596	67.248	1.9085					57	20	4	0	0	0	0.0023981	4	27235	27196;27235;27276;27334		139.14	122.03	1	12535000			9092	3607	4427	4449	10993;10994;10995;10996	10994					-0.060318255360471085
GYADIVQLL	9	Unmodified	_GYADIVQLL_					0	0	0		ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2776672244072	2	496.276575	990.538597	3.8627	0.001917	-0.87231	-0.00043291	2.9904	0.0014841	496.2762599633039	81.998	0.46748	83.21	82.975	83.443	1.2125					33	14	3	0	0	0	0.15635	2	34441	34393;34441		37.974	16.227	1	2349500			9093	2645	4428	4450	10997;10998	10998					0.04294938211717181
GYADIVQLL	9	Unmodified	_GYADIVQLL_					0	0	0		ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5538818240166	1	991.545874	990.538597	5.3995	0.0053539	1.315	0.0013039	6.7145	0.0066578	991.5466068602668	82.005	0.40466	83.218	82.975	83.38	1.2125					19	12	2	0	0	0	0.033794	1	34420	34420		81.613	6.6841	1	1425200			9094	2645	4428	4450	10999	10999					0.04294938211717181
GYADIVQLL	9	Unmodified	_GYADIVQLL_					0	0	0		ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	ENSG00000134996|ENST00000346234|OSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2783080935478	2	496.276575	990.538597	3.8391	0.0019052	-0.53768	-0.00026684	3.3014	0.0016384	496.27643490561223	81.59	0.43253	83.286	83.043	83.476	1.6959					31	13	3	0	0	0	0.051699	2	34232	34182;34232		67.344	12.57	1	2468000			9095	2645	4428	4450	11000;11001	11001					0.04294938211717181
GYAEFLYQI	9	Unmodified	_GYAEFLYQI_					0	0	0		CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant;ENSG00000106066|ENST00000265394|CPVL	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2756835818291	2	552.274032	1102.53351	2.389	0.0013194	0.20719	0.00011443	2.5962	0.0014338	552.2743484197414	76.449	0.40619	77.743	77.546	77.952	1.2938					28	12	3	0	0	0	0.069258	2	32081	32081;32126		60.39	26.202	1	3304500			9096	372	4429	4451	11002;11003	11002					-0.013653656509177381
GYAEFLYQI	9	Unmodified	_GYAEFLYQI_					0	0	0		CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant;ENSG00000106066|ENST00000265394|CPVL	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2755004763603	2	552.274032	1102.53351	2.6651	0.0014719	-0.43846	-0.00024215	2.2267	0.0012297	552.2735394399481	75.94	0.33947	77.707	77.537	77.877	1.7672					29	10	4	0	0	0	0.069258	2	31894	31841;31894		60.39	35.716	1	4064000			9097	372	4429	4451	11004;11005	11005					-0.013653656509177381
GYAGCCQN	8	Unmodified	_GYAGCCQN_					0	0	0			REV__nc|ENSG00000108219|Q8NG11-3|TSPAN14	REV__nc|ENSG00000108219|Q8NG11-3|TSPAN14	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.1452209353447	2	408.144181	814.273808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.202	1	87.749	87.249	88.249	1.547								0	0	0	1.0178	1	36313	36313		0.79363	0.19213	1		+		9098	9251	4430	4452	11006	11006					-0.14075757805198919
GYAGCCQN	8	Unmodified	_GYAGCCQN_					0	0	0			REV__nc|ENSG00000108219|Q8NG11-3|TSPAN14	REV__nc|ENSG00000108219|Q8NG11-3|TSPAN14	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.1457702517509	2	408.144181	814.273808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.627	1	88.148	87.648	88.648	1.5209								0	0	0	1.0178	1	36520	36520		0.79363	0.10326	1		+		9099	9251	4430	4452	11007	11007					-0.14075757805198919
GYAGSWVSI	9	Unmodified	_GYAGSWVSI_					0	0	0		ENST00000531831.5_1_1:155023862-155026718:+|nuORF;ENST00000480331.5_1_1:155023340-155028240:+|nuORF;nc|ENSG00000143537|Q13444-13|ADAM15;nc|ENSG00000143537|Q13444-10|ADAM15;nc|ENSG00000143537|Q13444-9|ADAM15;nc|ENSG00000143537|Q13444-8|ADAM15;nc|ENSG00000143537|Q13444-2|ADAM15;nc|ENSG00000143537|Q13444-7|ADAM15;nc|ENSG00000143537|Q13444-6|ADAM15;nc|ENSG00000143537|Q13444-12|ADAM15;ENST00000461564.6_1_1:155023817-155033989:+|nuORF;nc|ENSG00000143537|Q13444-5|ADAM15;nc|ENSG00000143537|Q13444-4|ADAM15;ENST00000527418.5_1_1:155025082-155034975:+|nuORF;nc|ENSG00000143537|Q13444-3|ADAM15;ENSG00000143537|ENST00000356955|ADAM15	ENST00000531831.5_1_1:155023862-155026718:+|nuORF	ENST00000531831.5_1_1:155023862-155026718:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	939.4583007693291	1	939.457059	938.449782	2.4667	0.0023174	-1.2488	-0.0011732	1.2179	0.0011442	939.4552542940571	59.832	0.24372	61.252	61.115	61.358	1.4196					11	7	2	0	0	0	0.44535	1	25111	25111		18.135	4.6271	1	673250			9100	3039	4431	4453	11008	11008					-0.021904770279661534
GYAGSWVSI	9	Unmodified	_GYAGSWVSI_					0	0	0		ENST00000531831.5_1_1:155023862-155026718:+|nuORF;ENST00000480331.5_1_1:155023340-155028240:+|nuORF;nc|ENSG00000143537|Q13444-13|ADAM15;nc|ENSG00000143537|Q13444-10|ADAM15;nc|ENSG00000143537|Q13444-9|ADAM15;nc|ENSG00000143537|Q13444-8|ADAM15;nc|ENSG00000143537|Q13444-2|ADAM15;nc|ENSG00000143537|Q13444-7|ADAM15;nc|ENSG00000143537|Q13444-6|ADAM15;nc|ENSG00000143537|Q13444-12|ADAM15;ENST00000461564.6_1_1:155023817-155033989:+|nuORF;nc|ENSG00000143537|Q13444-5|ADAM15;nc|ENSG00000143537|Q13444-4|ADAM15;ENST00000527418.5_1_1:155025082-155034975:+|nuORF;nc|ENSG00000143537|Q13444-3|ADAM15;ENSG00000143537|ENST00000356955|ADAM15	ENST00000531831.5_1_1:155023862-155026718:+|nuORF	ENST00000531831.5_1_1:155023862-155026718:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	939.457059	938.449782	2.8856	0.0027109	-2.4633	-0.0023141	0.42232	0.00039675	939.4546063403695	59.355	0.27319	61.324	61.131	61.405	1.969	0.036427	-0.0005468	NaN	18.135	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	925470			9101	3039	4431	4453							-0.021904770279661534
GYASRFIVI	9	Unmodified	_GYASRFIVI_					0	0	0		ENSG00000153574|ENST00000283646|RPIA	ENSG00000153574|ENST00000283646|RPIA	ENSG00000153574|ENST00000283646|RPIA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2933227419853	2	513.292559	1024.57057	1.6201	0.00083157	-0.254	-0.00013038	1.3661	0.00070119	513.2921195743568	53.871	0.36175	55.272	55.072	55.434	1.4005					25	12	4	0	0	0	0.12216	2	22566	22515;22566		41.956	17.282	1	4557500			9102	3363	4432	4454	11009;11010	11010					0.05926350685513171
GYASRFIVI	9	Unmodified	_GYASRFIVI_					0	0	0		ENSG00000153574|ENST00000283646|RPIA	ENSG00000153574|ENST00000283646|RPIA	ENSG00000153574|ENST00000283646|RPIA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2923461794853	2	513.292559	1024.57057	0.96256	0.00049408	0.33753	0.00017325	1.3001	0.00066733	513.2922970238324	53.332	0.2934	55.301	55.147	55.44	1.9697					24	9	3	0	0	0	0.099302	2	22318	22318;22366		49.554	24.155	1	2913700			9103	3363	4432	4454	11011;11012	11011					0.05926350685513171
GYATEFFQDF	10	Unmodified	_GYATEFFQDF_					0	0	0			REV__ENSG00000005073|ENST00000006015|HOXA11	REV__ENSG00000005073|ENST00000006015|HOXA11	MSMS	GG20161007_CRH_Patient100_W632_02	4	612.7670776247978	2	612.764029	1223.5135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.383	1	44.304	43.804	44.804	1.9211								0	0	0	0.65539	1	17761	17761		9.3831	0.63772	1		+		9104	8492	4433	4455	11013	11013					-0.08931161381519814
GYDCSDMS	8	Unmodified	_GYDCSDMS_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	439.1378051638603	2	439.138761	876.262969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.89	1	101.96	101.46	102.46	0.067009								0	0	0	1.0178	1	42660	42660		2.5775	1.8871	1				9105	663	4434	4456	11014	11014					-0.1801120497013926
GYEVEESIEFS	11	Unmodified	_GYEVEESIEFS_					0	0	0		tr|A0A553SPR6|A0A553SPR6_NIACINADH:flavinoxidoreductase/NADHoxidaseOS=NialliacirculansOX=1397GN=CEQ21_26720PE=4SV=1	tr|A0A553SPR6|A0A553SPR6_NIACINADH:flavinoxidoreductase/NADHoxidaseOS=NialliacirculansOX=1397GN=CEQ21_26720PE=4SV=1	tr|A0A553SPR6|A0A553SPR6_NIACINADH:flavinoxidoreductase/NADHoxidaseOS=NialliacirculansOX=1397GN=CEQ21_26720PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.7840453982353	2	644.782615	1287.55068	1.4691	0.00094724	1.7178	0.0011076	3.1869	0.0020549	644.7847162377794	84.476	0.4094	85.635	85.464	85.874	1.159					28	12	4	0	0	0	0.84637	1	35494	35494		13.042	0	1	3343200			9106	16480	4435	4457	11015	11015					-0.08159534626406639
GYHDIVVTF	9	Unmodified	_GYHDIVVTF_					0	0	0		nc|ENSG00000125875|Q96BZ9-3|TBC1D20;ENSG00000125875|ENST00000354200|TBC1D20	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7664672732353	2	525.766374	1049.5182	2.1472	0.0011289	-0.72484	-0.0003811	1.4223	0.00074782	525.766789695904	49.541	0.33826	50.932	50.765	51.103	1.3911					18	10	2	0	0	0	0.19075	1	20762	20762		34.102	7.7612	1	1252200			9107	2288	4436	4458	11016	11016					-0.004582324481134492
GYHDIVVTF	9	Unmodified	_GYHDIVVTF_					0	0	0		nc|ENSG00000125875|Q96BZ9-3|TBC1D20;ENSG00000125875|ENST00000354200|TBC1D20	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7668334841728	2	525.766374	1049.5182	1.833	0.00096371	0.070583	3.711E-05	1.9035	0.0010008	525.7667907621449	48.995	0.33791	50.972	50.792	51.13	1.9772					14	10	2	0	0	0	0.20671	1	20542	20542		32.305	5.4218	1	1294400			9108	2288	4436	4458	11017	11017					-0.004582324481134492
GYHPFLFL	8	Unmodified	_GYHPFLFL_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF;ENSG00000116151|ENST00000378531|MORN1	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2639953494072	2	497.263271	992.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.088	1	31.903	31.403	32.403	1.8151								0	0	0	1.0178	1	12613	12613		6.3541	0	1				9109	7559	4437	4459	11018	11018					0.015432941110361753
GYIERPQLI	9	Unmodified	_GYIERPQLI_					0	0	0		nc|ENSG00000164329|Q6PIY7-2|TENT2;ENSG00000164329|ENST00000453514|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8108398318291	2	544.808574	1087.60259	2.2195	0.0012092	3.4585	0.0018842	5.6781	0.0030935	544.8113209753831	40.187	0.30832	41.497	41.3	41.608	1.3102					17	9	2	0	0	0	0.093059	2	16839	16839;16894		51.63	28.894	1	1264300			9110	3773	4438	4460	11019;11020	11019					0.062297183686723656
GYIERPQLI	9	Unmodified	_GYIERPQLI_					0	0	0		nc|ENSG00000164329|Q6PIY7-2|TENT2;ENSG00000164329|ENST00000453514|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8133422732353	2	544.808574	1087.60259	1.7811	0.00097035	3.266	0.0017793	5.0471	0.0027497	544.810858057438	39.767	0.36744	41.63	41.433	41.8	1.8624					19	11	3	0	0	0	0.093059	1	16684	16684		51.63	26.956	1	908010			9111	3773	4438	4460	11021	11021					0.062297183686723656
GYIESIILS	9	Unmodified	_GYIESIILS_					0	0	0		tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	994.5442993044853	1	994.545539	993.538263	1.8217	0.0018118	-0.89215	-0.00088729	0.92956	0.00092449	994.5455353771939	76.359	0.49133	76.359	76.164	76.656	0					24	15	2	0	0	0	0.069258	1	31755	31755		60.39	5.616	1	1523100			9112	17068	4439	4461	11022	11022					0.04123518491860523
GYIESIILS	9	Unmodified	_GYIESIILS_					0	0	0		tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	tr|A0A7D6ZGA4|A0A7D6ZGA4_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17370PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5544311404228	1	994.545539	993.538263	4.2488	0.0042257	3.3255	0.0033074	7.5744	0.0075331	994.5510858014783	74.945	0.4965	76.251	76.028	76.524	1.3063					27	15	3	0	0	0	0.03795	1	31406	31406		77.984	6.8507	1	2956700			9113	17068	4439	4461	11023	11023					0.04123518491860523
GYKTFFNEF	9	Unmodified	_GYKTFFNEF_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MSMS	GG20161007_CRH_Patient100_W632_02	4	576.7697631716728	2	576.771657	1151.52876	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.976	1	58.944	58.444	59.444	1.9684								0	0	0	0.3792	1	23900	23900		10.824	1.4408	1				9114	5012	4440	4462	11024	11024					-0.04094249793683957
GYLPNQLFRTF	11	Unmodified	_GYLPNQLFRTF_					0	0	0		ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-3|DDX1	ENSG00000079785|ENST00000233084|DDX1	ENSG00000079785|ENST00000233084|DDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	678.3601562380791	2	678.358962	1354.70337	2.4984	0.0016948	-0.011289	-7.658E-06	2.4871	0.0016871	678.3589172626015	69.995	0.56361	71.348	71.116	71.679	1.3536					48	17	4	0	0	0	0.026334	3	29398	29349;29398;29467		100.71	86.303	1	5476200			9115	995	4441	4463	11025;11026;11027	11026					0.040207503515148346
GYLPNQLFRTF	11	Unmodified	_GYLPNQLFRTF_					0	0	0		ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-3|DDX1	ENSG00000079785|ENST00000233084|DDX1	ENSG00000079785|ENST00000233084|DDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	678.3596069216728	2	678.358962	1354.70337	1.8356	0.0012452	0.25733	0.00017456	2.0929	0.0014197	678.3592543365429	69.465	0.50508	71.318	71.103	71.608	1.853					43	15	4	0	0	0	0.067609	3	29160	29109;29160;29213		75.571	49.302	1	4793100			9116	995	4441	4463	11028;11029;11030	11029					0.040207503515148346
GYMEGYYTF	9	Unmodified	_GYMEGYYTF_					0	0	0		ENST00000527772.1_1_11:33767599-33770353:-|nuORF;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3;FBXO3|p.E433Rfs*3|1|0.22|ENSG00000110429|chr11:33742024-33742028|CTTCC/-|frameshift_variant;ENSG00000110429|ENST00000265651|FBXO3	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1130.449145495892	1	1130.44992	1129.44265	1.1715	0.0013243	-1.0494	-0.0011863	0.12204	0.00013796	1130.4490326624107	58.247	0.28858	60.216	60.084	60.373	1.969					14	8	2	0	0	0	0.1735	1	24435	24435		36.044	12.896	1	1202300			9117	1705	4442	4464	11031	11031					-0.11689577690708575
GYMEGYYTF	9	Unmodified	_GYMEGYYTF_					0	0	0		ENST00000527772.1_1_11:33767599-33770353:-|nuORF;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3;FBXO3|p.E433Rfs*3|1|0.22|ENSG00000110429|chr11:33742024-33742028|CTTCC/-|frameshift_variant;ENSG00000110429|ENST00000265651|FBXO3	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7280151247978	2	565.7286	1129.44265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.222	1	60.191	59.691	60.691	1.969								0	0	0	0.29162	1	24422	24422		19.439	5.9311	1				9118	1705	4442	4464	11032	11032					-0.11689577690708575
GYMEGYYTF	9	Unmodified	_GYMEGYYTF_					0	0	0		ENST00000527772.1_1_11:33767599-33770353:-|nuORF;nc|ENSG00000110429|Q9UK99-3|FBXO3;nc|ENSG00000110429|Q9UK99-2|FBXO3;FBXO3|p.E433Rfs*3|1|0.22|ENSG00000110429|chr11:33742024-33742028|CTTCC/-|frameshift_variant;ENSG00000110429|ENST00000265651|FBXO3	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	ENST00000527772.1_1_11:33767599-33770353:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1130.44992	1129.44265	1.1427	0.0012917	0.28283	0.00031973	1.4255	0.0016114	1130.4504290442585	58.71	0.28603	60.128	60.003	60.289	1.4181	-0.043818	0.00087524	NaN	36.044	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1236000			9119	1705	4442	4464							-0.11689577690708575
GYMHKTIK	8	Unmodified	_GYMHKTIK_					0	0	0		ENSG00000165370|ENST00000651716|GPR101	ENSG00000165370|ENST00000651716|GPR101	ENSG00000165370|ENST00000651716|GPR101	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2660095095634	2	489.265487	976.516422	0.83782	0.00040991	-0.32261	-0.00015784	0.5152	0.00025207	489.2653400259672	37.744	0.77	39.564	39.078	39.848	1.8202					50	26	2	0	0	0	0.68174	1	15808	15808		32.117	5.7757	1	53307000			9120	3833	4443	4465	11033	11033					0.027224352623193226
GYMLRLGAP	9	Unmodified	_GYMLRLGAP_					0	0	0		ENST00000472064.1_1_1:203149576-203151929:-|nuORF;ENSG00000133048|ENST00000255409|CHI3L1	ENST00000472064.1_1_1:203149576-203151929:-|nuORF	ENST00000472064.1_1_1:203149576-203151929:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2662536501884	2	489.265487	976.516422	0.83782	0.00040991	-0.32261	-0.00015784	0.5152	0.00025207	489.2653400259672	37.744	0.77	39.564	39.078	39.848	1.8202					50	26	2	0	0	0	0.22519	1	15717	15717		30.225	10.786	1	53307000			9121	2557	4444	4466	11034	11034					0.02722435262307954
GYNVKFDMF	9	Unmodified	_GYNVKFDMF_					0	0	0		ENST00000589115.5_1_19:1105440-1106426:+|nuORF;ENST00000588919.5_1_19:1105440-1106636:+|nuORF;nc|ENSG00000167468|P36969-2|GPX4;ENSG00000167468|ENST00000354171|GPX4	ENST00000589115.5_1_19:1105440-1106426:+|nuORF	ENST00000589115.5_1_19:1105440-1106426:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7601196169853	2	560.760235	1119.50592	0.46986	0.00026348	-0.5632	-0.00031582	-0.093338	-5.234E-05	560.7603533509492	57.465	0.34567	58.88	58.696	59.042	1.4145					37	17	4	0	0	0	0.0033884	2	24054	24054;24096		126.57	61.331	1	19117000			9122	3969	4445	4467	11035;11036	11035					-0.049055921827857674
GYNVKFDMF	9	Unmodified	_GYNVKFDMF_					0	0	0		ENST00000589115.5_1_19:1105440-1106426:+|nuORF;ENST00000588919.5_1_19:1105440-1106636:+|nuORF;nc|ENSG00000167468|P36969-2|GPX4;ENSG00000167468|ENST00000354171|GPX4	ENST00000589115.5_1_19:1105440-1106426:+|nuORF	ENST00000589115.5_1_19:1105440-1106426:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7609130740166	2	560.760235	1119.50592	0.72232	0.00040505	-0.85244	-0.00047801	-0.13012	-7.2963E-05	560.7601372977426	56.89	0.37212	58.858	58.662	59.034	1.9684					33	12	4	0	0	0	0.0069529	3	23868	23820;23868;23923		114.65	49.414	1	24042000			9123	3969	4445	4467	11037;11038;11039	11038					-0.049055921827857674
GYPEVALHF	9	Unmodified	_GYPEVALHF_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.3249999880791	2	516.761092	1031.50763	1.7621	0.0009106	0.54964	0.00028403	2.3118	0.0011946	516.761570668981	54.981	0.43396	56.386	56.121	56.555	1.4048					39	14	3	0	0	0	0.061353	1	22977	22977		24.674	0	1	4877400			9124	2150	4446	4468	11040	11040					-0.006862151025416097
GYPEVALHF	9	Unmodified	_GYPEVALHF_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.3232299685478	2	516.761092	1031.50763	2.0408	0.0010546	0.50969	0.00026339	2.5505	0.001318	516.7615127667582	54.534	0.38425	56.502	56.255	56.639	1.9684					32	12	3	0	0	0	0.061353	1	22798	22798		24.674	2.9272	1	3645700			9125	2150	4446	4468	11041	11041					-0.006862151025416097
GYPLWKVTF	9	Unmodified	_GYPLWKVTF_					0	0	0		ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8040649294853	2	555.80276	1109.59097	1.7483	0.00097171	-3.1799	-0.0017674	-1.4316	-0.00079571	555.8029015924383	66.897	0.58935	68.286	67.996	68.586	1.3888					72	18	5	0	0	0	0.01454	3	28030	27985;28030;28067		103.75	67.621	1	19916000			9126	5087	4447	4469	11042;11043;11044	11043					0.04055521345298985
GYPLWKVTF	9	Unmodified	_GYPLWKVTF_					0	0	0		ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8037597537041	2	555.80276	1109.59097	1.5797	0.00087801	-2.8325	-0.0015743	-1.2528	-0.00069631	555.8027180507968	66.379	0.70967	68.268	67.994	68.704	1.8889					70	22	5	0	0	0	0.033504	3	27831	27789;27831;27870		81.89	42.601	1	20497000			9127	5087	4447	4469	11045;11046;11047	11046					0.04055521345298985
GYRRRKNIWYL	11	Unmodified	_GYRRRKNIWYL_					0	0	0			REV__ENSG00000186118|ENST00000334122|TEX38	REV__ENSG00000186118|ENST00000334122|TEX38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	508.2902709841728	3	508.956393	1523.84735	2.1932	0.0011162	0.98211	0.00049985	3.1753	0.0016161	508.956783561595	40.286	0.27761	42.149	41.987	42.265	1.8624					14	8	2	0	0	0	0.14606	1	16860	16860		1.2148	0	1	3660200	+		9128	11489	4448	4470	11048	11048					0.10638016902339587
GYSEHFVEF	9	Unmodified	_GYSEHFVEF_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;ENST00000559287.5_1_14:24702733-24706289:+|nuORF;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7468139529228	2	557.745639	1113.47673	2.6241	0.0014636	-0.62492	-0.00034855	1.9992	0.0011151	557.7453560404615	44.674	0.66284	46.039	45.738	46.401	1.3653					68	20	5	0	0	0	0.022807	4	18739	18652;18700;18739;18779		97.075	62.887	1	89465000			9129	2761	4449	4471	11049;11050;11051;11052	11051					-0.07547413207407772
GYSEHFVEF	9	Unmodified	_GYSEHFVEF_					0	0	0		ENSG00000137198|ENST00000259727|GMPR;ENST00000559606.1_1_14:24704927-24706289:+|nuORF;ENST00000559287.5_1_14:24702733-24706289:+|nuORF;nc|ENSG00000100938|Q9P2T1-3|GMPR2;ENSG00000100938|ENST00000399440|GMPR2;nc|ENSG00000100938|Q9P2T1-2|GMPR2	ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7469360232353	2	557.745639	1113.47673	2.2024	0.0012284	-0.058243	-3.2485E-05	2.1441	0.0011959	557.7456299837837	44.062	0.69828	46.005	45.701	46.399	1.9438					74	21	5	0	0	0	0.013238	5	18421	18379;18421;18460;18499;18539		104.8	72.494	1	68106000			9130	2761	4449	4471	11053;11054;11055;11056;11057	11054					-0.07547413207407772
GYSFTTTAER	10	Unmodified	_GYSFTTTAER_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000417985.1_1_X:46147855-46148119:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7681152224541	2	566.767103	1131.51965	1.0941	0.00062013	0.14747	8.3584E-05	1.2416	0.00070371	566.767168105921	21.647	0.27194	22.824	22.688	22.96	1.177					26	8	4	0	0	0	0.14932	2	9026	9026;9077		55.235	19.108	1	3872700			9131	937	4450	4472	11058;11059	11058					-0.040846431500312974
GYSFTTTAER	10	Unmodified	_GYSFTTTAER_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;ENST00000417985.1_1_X:46147855-46148119:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.7675048708916	2	566.767103	1131.51965	0.48623	0.00027558	0.090045	5.1035E-05	0.57628	0.00032662	566.7671951801084	21.298	0.26685	22.873	22.712	22.979	1.5748					27	8	4	0	0	0	0.21017	2	8891	8845;8891		47.732	18.65	1	4299000			9132	937	4450	4472	11060;11061	11061					-0.040846431500312974
GYTGDIKFRYL	11	Unmodified	_GYTGDIKFRYL_					0	0	0			REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	666.8454467654228	2	666.85097	1331.68739	0.24771	0.00016519	-3.2134	-0.0021428	-2.9657	-0.0019777	667.3504434915659	33.918	0.20018	35.193	35.078	35.279	1.2746					47	22	3	0	0	0	0.20118	2	14216	14216;14256		39.95	11.716	1	27375000	+		9133	15681	4451	4473	11062;11063	11062					0.034810441146191806
GYTGDIKFRYL	11	Unmodified	_GYTGDIKFRYL_					0	0	0			REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	666.8496581912041	2	666.85097	1331.68739	0.59891	0.00039938	-2.4217	-0.0016149	-1.8228	-0.0012155	666.8490580104585	33.405	0.26826	35.229	35.11	35.378	1.8246					50	22	3	0	0	0	0.14477	3	14062	13979;14019;14062		47.749	12.371	1	28400000	+		9134	15681	4451	4473	11064;11065;11066	11066					0.034810441146191806
GYTGDIKFRYL	11	Unmodified	_GYTGDIKFRYL_					0	0	0			REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	666.85097	1331.68739	0.24771	0.00016519	-3.2134	-0.0021428	-2.9657	-0.0019777	667.3504434915659	33.918	0.20018	35.193	35.078	35.279	1.2746	-0.01843	-0.00055506	NaN	47.749	47	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27375000	+		9135	15681	4451	4473							0.034810441146191806
GYTGDIKFRYL	11	Unmodified	_GYTGDIKFRYL_					0	0	0			REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	REV__tr|A0A7D6ZPF0|A0A7D6ZPF0_9CLOTTripletyrosinemotif-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20015PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	666.85097	1331.68739	0.59891	0.00039938	-2.4217	-0.0016149	-1.8228	-0.0012155	666.8490580104585	33.405	0.26826	35.229	35.11	35.378	1.8246	0.01843	0.00050086	NaN	47.749	50	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28400000	+		9136	15681	4451	4473							0.034810441146191806
GYYEIYYK	8	Unmodified	_GYYEIYYK_					0	0	0		tr|A0A7D6VNT3|A0A7D6VNT3_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14250PE=4SV=1	tr|A0A7D6VNT3|A0A7D6VNT3_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14250PE=4SV=1	tr|A0A7D6VNT3|A0A7D6VNT3_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14250PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2195312380791	2	549.760758	1097.50696	2.5398	0.0013963	-4.3673	-0.002401	-1.8275	-0.0010047	549.7590396889938	85.201	0.15379	85.453	85.354	85.508	0.25227					6	4	2	0	0	0	2.3239	1	35626	35626		0.69038	0.088878	1	271950			9137	16744	4452	4474	11067	11067					-0.037890545422669675
HAAELIKTV	9	Unmodified	_HAAELIKTV_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2888671755791	2	491.290017	980.565481	0.66829	0.00032833	-0.37456	-0.00018402	0.29374	0.00014431	491.28980100021874	18.599	0.17445	19.578	19.478	19.653	0.97922					8	5	2	0	0	0	0.17276	1	7760	7760		36.127	20.28	1	586980			9138	4132	4453	4475	11068	11068					0.07442046822905013
HAAELIKTV	9	Unmodified	_HAAELIKTV_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2890807986259	2	491.290017	980.565481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.115	1	19.563	19.063	20.063	1.448								0	0	0	0.10913	1	7531	7531		32.786	13.529	1				9139	4132	4453	4475	11069	11069					0.07442046822905013
HAALETQTL	9	Unmodified	_HAALETQTL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2612487673759	2	492.261456	982.50836	0.98611	0.00048542	-0.45392	-0.00022345	0.5322	0.00026198	492.2610045646066	21.05	0.23296	22.175	22.043	22.276	1.1254					14	7	2	0	0	0	0.046276	2	8802	8753;8802		70.716	42.229	1	3203400			9140	4424	4454	4476	11070;11071	11071					0.016405795465175288
HAALETQTL	9	Unmodified	_HAALETQTL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2614013552666	2	492.261456	982.50836	0.57529	0.00028319	-0.74476	-0.00036662	-0.16947	-8.3422E-05	492.2610399905788	20.62	0.26084	22.195	22.059	22.32	1.5748					19	8	3	0	0	0	0.059546	2	8606	8561;8606		64.236	37.241	1	2576500			9141	4424	4454	4476	11072;11073	11073					0.016405795465175288
HAAPFQNIL	9	Unmodified	_HAAPFQNIL_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENST00000522892.1_1_5:156788429-156810457:+|nuORF;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7758056521416	2	505.774534	1009.53451	1.8535	0.00093748	1.9056	0.0009638	3.7591	0.0019013	505.7751379167779	46.173	0.53304	47.549	47.24	47.773	1.3751					38	16	3	0	0	0	0.078975	2	19354	19307;19354		56.541	16.27	1	4419800			9142	5452;719	4455	4477	11074;11075	11075					0.03012893508673642
HAAPFQNIL	9	Unmodified	_HAAPFQNIL_					0	0	0		nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000055163|ENST00000620254|CYFIP2;ENST00000522892.1_1_5:156788429-156810457:+|nuORF;ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	nc|ENSG00000055163|Q96F07|CYFIP2;ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7756225466728	2	505.774534	1009.53451	1.3694	0.00069262	1.8912	0.00095652	3.2606	0.0016491	505.7751770645598	45.677	0.5377	47.647	47.375	47.912	1.9703					38	16	3	0	0	0	0.10722	2	19138	19093;19138		46.921	12.818	1	4041700			9143	5452;719	4455	4477	11076;11077	11077					0.03012893508673642
HACATHNT	8	Unmodified	_HACATHNT_					0	0	0			REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.3580810427666	1	854.357361	853.350085	1.2694	0.0010845	0.27428	0.00023433	1.5437	0.0013188	854.3571405576064	98.78	0.24715	98.78	98.66	98.907	0					21	8	4	0	0	0	0.89176	1	41354	41354		0.79363	0	1	214540000	+		9144	10945	4456	4478	11078	11078					-0.08245617913541992
HACATHNT	8	Unmodified	_HACATHNT_					0	0	0			REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.3590576052666	1	854.357361	853.350085	1.2037	0.0010284	1.5972	0.0013646	2.8009	0.0023929	854.3583033098148	102.19	0.15975	102.19	102.1	102.26	0					13	5	4	0	0	0	0.89176	1	42798	42798		0.79363	0	1	43107000	+		9145	10945	4456	4478	11079	11079					-0.08245617913541992
HACATHNT	8	Unmodified	_HACATHNT_					0	0	0			REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	REV__GP2|p.V397Lfs*8|1|0.1|ENSG00000169347|chr16:20318232-20318259|GGGGGTGGCATAGCAGTTCCTCAACACC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	854.3591186404228	1	854.357361	853.350085	2.7869	0.002381	0.050756	4.3364E-05	2.8377	0.0024244	854.3570034277626	102.14	0.17025	102.2	102.13	102.3	0.062805					15	5	4	0	0	0	0.89176	1	42771	42771		0.79363	0	1	100360000	+		9146	10945	4456	4478	11080	11080					-0.08245617913541992
HADDSFLVL	9	Unmodified	_HADDSFLVL_					0	0	0		ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7568237185478	2	508.756007	1015.49746	1.31	0.00066648	0.016794	8.5438E-06	1.3268	0.00067502	508.7559621326201	56.531	0.21703	57.946	57.784	58.001	1.4145					11	6	2	0	0	0	0.11478	1	23664	23664		44.407	14.182	1	1252800			9147	3707	4457	4479	11081	11081					-0.00966822827751912
HADDSFLVL	9	Unmodified	_HADDSFLVL_					0	0	0		ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	ENSG00000163644|ENST00000608933|PPM1K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7567932009697	2	508.756007	1015.49746	1.1794	0.0006	0.75353	0.00038336	1.9329	0.00098336	508.75642125012	55.936	0.24617	57.904	57.78	58.026	1.9684					10	7	2	0	0	0	0.37357	1	23461	23461		21.747	4.8044	1	835270			9148	3707	4457	4479	11082	11082					-0.00966822827751912
HAELTVPVL	9	Unmodified	_HAELTVPVL_					0	0	0		ENSG00000127220|ENST00000247706|ABHD8	ENSG00000127220|ENST00000247706|ABHD8	ENSG00000127220|ENST00000247706|ABHD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7846252322197	2	489.784567	977.554582	1.0685	0.00052335	0.57259	0.00028045	1.6411	0.00080379	489.7849408806825	51.983	0.28921	53.379	53.265	53.554	1.3966					17	9	2	0	0	0	0.046276	2	21796	21745;21796		70.716	19.86	1	2097200			9149	2331	4458	4480	11083;11084	11084					0.06490644448626881
HAELTVPVL	9	Unmodified	_HAELTVPVL_					0	0	0		ENSG00000127220|ENST00000247706|ABHD8	ENSG00000127220|ENST00000247706|ABHD8	ENSG00000127220|ENST00000247706|ABHD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2856017947197	2	489.784567	977.554582	0.36354	0.00017806	0.25502	0.0001249	0.61856	0.00030296	489.7847265969504	51.364	0.42302	53.34	53.165	53.588	1.9753					23	15	2	0	0	0	0.087207	1	21528	21528		53.576	17.531	1	1858400			9150	2331	4458	4480	11085	11085					0.06490644448626881
HAFWGGSVV	9	Unmodified	_HAFWGGSVV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2411987185478	2	480.240327	958.466101	1.7845	0.000857	0.014142	6.7914E-06	1.7987	0.00086379	480.2402461712166	42.784	0.50314	44.124	43.859	44.362	1.3399					45	15	4	0	0	0	0.046105	3	17898	17898;17949;17989		70.865	44.523	1	11887000			9151	2533	4459	4481	11086;11087;11088	11086					-0.014793510711797353
HAFWGGSVV	9	Unmodified	_HAFWGGSVV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2407409548759	2	480.240327	958.466101	1.5928	0.00076494	-0.54158	-0.00026009	1.0512	0.00050485	480.23992342914	42.166	0.40412	44.087	43.918	44.322	1.9211					35	12	4	0	0	0	0.046105	3	17649	17649;17698;17737		70.865	44.523	1	14889000			9152	2533	4459	4481	11089;11090;11091	11089					-0.014793510711797353
HAGNASGSGSS	11	Unmodified	_HAGNASGSGSS_					0	0	0		ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1338989138603	3	311.133655	930.379136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.37	1	110.42	109.92	110.92	0.047043								0	0	0	0.63775	1	47616	47616		0.094841	0.094841	1				9153	7384	4460	4482	11092	11092					-0.08883802083551018
HAGNASGSGSS	11	Unmodified	_HAGNASGSGSS_					0	0	0		ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1337768435478	3	311.133655	930.379136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.83	1	110.88	110.38	111.38	0.047043								0	0	0	0.63775	1	47802	47802		0.094841	0.094841	1				9154	7384	4460	4482	11093	11093					-0.08883802083551018
HAGNASGSGSS	11	Unmodified	_HAGNASGSGSS_					0	0	0		ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	ENST00000569914.5_1_16:67144038-67154090:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1339294314384	3	311.133655	930.379136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.38	1	111.43	110.93	111.93	0.047043								0	0	0	0.63775	1	48025	48025		0.094841	0.094841	1				9155	7384	4460	4482	11094	11094					-0.08883802083551018
HAHHGDEDW	9	Unmodified	_HAHHGDEDW_					0	0	0			REV__DHH|p.Q137H|1|0.13|ENSG00000139549|chr12:49091282-49091282|C/A|missense_variant	REV__DHH|p.Q137H|1|0.13|ENSG00000139549|chr12:49091282-49091282|C/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2136718630791	2	552.218111	1102.42167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.528	1	27.245	26.745	27.745	1.7167								0	0	0	0.42693	1	10673	10673		2.3027	0.4585	1		+		9156	8441	4461	4483	11095	11095					-0.12544406955339582
HAIDKYSRLI	10	Unmodified	_HAIDKYSRLI_					0	0	0		ENSG00000111886|ENST00000402938|GABRR2;nc|ENSG00000111886|P28476-2|GABRR2	ENSG00000111886|ENST00000402938|GABRR2	ENSG00000111886|ENST00000402938|GABRR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1215.688281238079	1	1215.68443	1214.67716	1.353	0.0016448	1.355	0.0016472	2.708	0.003292	1215.685740723168	103.68	0.097115	103.68	103.62	103.71	0					14	4	4	0	0	0	0.88579	1	43580	43580		2.9952	0	1	22575000			9157	1761	4462	4484	11096	11096					0.07840481180028291
HAKVTSKT	8	Unmodified	_HAKVTSKT_					0	0	0			REV__ENST00000483123.1_1_1:179845162-179845291:-|nuORF	REV__ENST00000483123.1_1_1:179845162-179845291:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	436.2533447146416	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.88	1	103.88	103.38	104.38	0								0	0	0	1.0178	1	43722	43722		0.6015	0	1		+		9158	13377	4463	4485	11097	11097					0.051889181002820806
HALAKKNN	8	Unmodified	_HALAKKNN_					0	0	0			REV__tr|A0A7D6ZX93|A0A7D6ZX93_9CLOTAminopyrimidineaminohydrolaseOS=ClostridiumintestinaleOX=36845GN=tenAPE=3SV=1	REV__tr|A0A7D6ZX93|A0A7D6ZX93_9CLOTAminopyrimidineaminohydrolaseOS=ClostridiumintestinaleOX=36845GN=tenAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2592956423759	2	448.259051	894.503549	2.2974	0.0010298	-0.24129	-0.00010816	2.0561	0.00092167	448.2587884397399	71.888	0.89194	72.213	71.656	72.547	0.32494					49	27	3	0	0	0	0.89051	1	30027	30027		2.3027	0	1	8878300	+		9159	15758	4464	4486	11098	11098					0.05207740194418875
HALKVVRF	8	Unmodified	_HALKVVRF_					0	0	0		ENST00000607532.5_1_6:13307806-13327130:-|nuORF;nc|ENSG00000145979|Q9P0N9-3|TBC1D7;nc|ENSG00000145979|Q9P0N9-4|TBC1D7;nc|ENSG00000145979|Q9P0N9-2|TBC1D7;ENSG00000145979|ENST00000379300|TBC1D7	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	ENST00000607532.5_1_6:13307806-13327130:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	323.8717834353447	3	323.871267	968.59197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.07778	1	0.23622	-0.26378	0.73622	0.15844								0	0	0	1.0178	1	32	32		0.45834	0	1				9160	3131	4465	4487	11099	11099					0.10641780504897724
HARLRLTGRF	10	Unmodified	_HARLRLTGRF_					0	0	0		FXYD3|p.C61Nfs*90|1|0.09|ENSG00000089356|chr19:35122921-35122922|-/CA|frameshift_variant	FXYD3|p.C61Nfs*90|1|0.09|ENSG00000089356|chr19:35122921-35122922|-/CA|frameshift_variant	FXYD3|p.C61Nfs*90|1|0.09|ENSG00000089356|chr19:35122921-35122922|-/CA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	613.3666869997978	2	613.86508	1225.71561	5.5938	0.0034338	2.8265	0.0017351	8.4202	0.0051689	613.8663077693176	88.463	0.32185	89.519	89.337	89.659	1.0562					14	9	2	0	0	0	0.12493	1	37315	37315		6.7232	0.99131	1	664370			9161	7586	4466	4488	11100	11100					0.11177831605186839
HARPSRCP	8	Unmodified	_HARPSRCP_					0	0	0			REV__ENST00000553961.1_1_14:69446487-69454135:+|nuORF	REV__ENST00000553961.1_1_14:69446487-69454135:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.2362548708916	2	462.235053	922.455553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.84	1	100.91	100.41	101.41	0.067009								0	0	0	1.0178	1	42218	42218		2.5775	0	1		+		9162	13845	4467	4489	11101	11101					-0.008776569972837933
HASDRIIAL	9	Unmodified	_HASDRIIAL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2879211306572	2	498.285266	994.555979	1.2118	0.00060384	0.37356	0.00018614	1.5854	0.00078998	498.28573547447456	26.066	0.37636	27.325	27.141	27.517	1.2594					24	11	3	0	0	0	0.11077	2	10896	10896;10943		45.74	23.993	1	2503800			9163	3733	4468	4490	11102;11103	11102					0.058482785373598745
HASDRIIAL	9	Unmodified	_HASDRIIAL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000469678.1_1_3:53259917-53265542:-|nuORF;ENST00000461139.5_1_3:53259774-53265639:-|nuORF;ENST00000460343.5_1_3:53261754-53265639:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2855407595634	2	498.285266	994.555979	0.51064	0.00025444	0.2768	0.00013793	0.78743	0.00039237	498.28592118902594	25.585	0.33912	27.302	27.183	27.523	1.7167					23	10	3	0	0	0	0.066197	2	10703	10703;10753		61.602	33.115	1	2055700			9164	3733	4468	4490	11104;11105	11104					0.058482785373598745
HASDVLLNL	9	Unmodified	_HASDVLLNL_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2720519900322	2	491.271824	980.529095	1.8372	0.00090258	-0.53561	-0.00026313	1.3016	0.00063945	491.27165741737315	49.257	0.49736	50.648	50.391	50.888	1.3911					36	15	3	0	0	0	0.018723	2	20640	20588;20640		100.37	29.238	1	5200800			9165	1842	4469	4491	11106;11107	11107					0.03805169926170038
HASDVLLNL	9	Unmodified	_HASDVLLNL_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2724792361259	2	491.271824	980.529095	2.0603	0.0010122	-0.97064	-0.00047685	1.0897	0.00053533	491.27126696803964	48.709	0.43205	50.686	50.422	50.854	1.9772					32	13	3	0	0	0	0.018723	1	20408	20408		100.37	29.238	1	5756700			9166	1842	4469	4491	11108	11108					0.03805169926170038
HASIVEVLL	9	Unmodified	_HASIVEVLL_					0	0	0		nc|ENSG00000104064|Q06547-4|GABPB1;nc|ENSG00000104064|Q06547-3|GABPB1;ENSG00000104064|ENST00000380877|GABPB1;nc|ENSG00000104064|Q06547|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.7938720583916	2	490.792392	979.570232	3.2085	0.0015747	0.058853	2.8884E-05	3.2673	0.0016036	490.7924246253558	60.941	0.53218	62.36	62.184	62.716	1.4196					41	16	3	0	0	0	0.028763	3	25573	25530;25573;25614		89.427	29.037	1	4948100			9167	1448	4470	4492	11109;11110;11111	11110					0.07962930965663872
HASIVEVLL	9	Unmodified	_HASIVEVLL_					0	0	0		nc|ENSG00000104064|Q06547-4|GABPB1;nc|ENSG00000104064|Q06547-3|GABPB1;ENSG00000104064|ENST00000380877|GABPB1;nc|ENSG00000104064|Q06547|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	nc|ENSG00000104064|Q06547-4|GABPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.7938720583916	2	490.792392	979.570232	3.4335	0.0016851	0.098967	4.8572E-05	3.5325	0.0017337	490.7923492938707	60.406	0.56193	62.371	62.167	62.729	1.9653					32	17	2	0	0	0	0.051699	3	25393	25305;25351;25393		67.344	25.249	1	4894300			9168	1448	4470	4492	11112;11113;11114	11114					0.07962930965663872
HAVEIQIQEL	10	Unmodified	_HAVEIQIQEL_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3240234255791	2	590.322045	1178.62954	1.5267	0.00090124	0.57088	0.000337	2.0976	0.0012382	590.3228320064746	45.516	0.25684	47.476	47.332	47.589	1.9596					11	7	2	0	0	0	0.58279	1	19080	19080		23.79	5.6434	1	560680			9169	472	4471	4493	11115	11115					0.04736782189183941
HAVEIQIQEL	10	Unmodified	_HAVEIQIQEL_					0	0	0		ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	ENSG00000004700|ENST00000444129|RECQL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	590.322045	1178.62954	1.7432	0.0010291	1.5452	0.00091217	3.2884	0.0019412	590.3240763027159	46.039	0.25123	47.415	47.209	47.46	1.3751	-0.030589	0.0006334	NaN	23.79	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	657010			9170	472	4471	4493							0.04736782189183941
HAVEWPVVM	9	Unmodified	_HAVEWPVVM_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2722045779228	2	534.27077	1066.52699	1.384	0.00073942	0.86451	0.00046188	2.2485	0.0012013	534.271074089013	55.332	0.51624	56.742	56.449	56.966	1.4099					45	17	5	0	0	0	0.046276	3	23160	23108;23160;23210		70.716	52.569	1	8481200			9171	4351	4472	4494	11116;11117;11118	11117					-0.0036158208329197805
HAVEWPVVM	9	Unmodified	_HAVEWPVVM_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.2712890505791	2	534.27077	1066.52699	1.1821	0.00063158	1.1161	0.00059628	2.2982	0.0012279	534.2708565782573	54.833	0.60998	56.801	56.495	57.105	1.9684					49	20	4	0	0	0	0.046276	1	23014	23014		70.716	53.773	1	8158400			9172	4351	4472	4494	11119	11119					-0.0036158208329197805
HAVLLPIL	8	Unmodified	_HAVLLPIL_					0	0	0			REV__ENST00000254846.9_1_17:7748945-7749936:+|nuORF	REV__ENST00000254846.9_1_17:7748945-7749936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2890807986259	2	438.289288	874.564024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	104.96	104.46	105.46	0								0	0	0	1.0178	1	44438	44438		0.79363	0	1		+		9173	12156	4473	4495	11120	11120					0.12172457524798119
HAVTVVNIL	9	Unmodified	_HAVTVVNIL_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2943603396416	2	483.292559	964.570566	1.4756	0.00071315	1.3579	0.00065628	2.8335	0.0013694	483.29314037795353	48.536	0.30531	49.923	49.743	50.048	1.388					17	9	2	0	0	0	0.046276	2	20296	20296;20345		70.716	34.671	1	1700000			9174	1446	4474	4496	11121;11122	11121					0.08686350685513844
HAVTVVNIL	9	Unmodified	_HAVTVVNIL_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2934753298759	2	483.292559	964.570566	2.2101	0.0010681	-0.29911	-0.00014456	1.911	0.00092356	483.29243846537787	47.994	0.33921	49.972	49.775	50.114	1.9772					20	10	3	0	0	0	0.059546	1	20088	20088		64.236	28.109	1	1876400			9175	1446	4474	4496	11123	11123					0.08686350685513844
HCAPCPPA	8	Unmodified	_HCAPCPPA_					0	0	0			REV__CIITA|p.C179Hfs*48|1|0.09|ENSG00000179583|chr16:10902090-10902091|-/CATTATATTTTTGGTACATTTCAATG|frameshift_variant	REV__CIITA|p.C179Hfs*48|1|0.09|ENSG00000179583|chr16:10902090-10902091|-/CATTATATTTTTGGTACATTTCAATG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	795.3343383669853	1	795.327641	794.320365	2.877	0.0022882	3.946	0.0031384	6.823	0.0054265	795.3300901757063	104.96	0.081276	105.13	105.08	105.17	0.16679					6	3	2	0	0	0	0.89176	1	44555	44555		0.79363	0	1	13575000	+		9176	8358	4475	4497	11124	11124					-0.08502273183250963
HCCALSCCA	9	Unmodified	_HCCALSCCA_					0	0	0		ENSG00000215455|ENST00000400375|KRTAP10-1	ENSG00000215455|ENST00000400375|KRTAP10-1	ENSG00000215455|ENST00000400375|KRTAP10-1	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1066161990166	3	304.106121	909.296534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.693	1	75.011	74.511	75.511	1.318								0	0	0	0.42693	1	30925	30925		0	0	1				9177	5257	4476	4498	11125	11125					-0.161741980035913
HCKEIRWYR	9	Unmodified	_HCKEIRWYR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8878356814384	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.118	1	10.863	10.363	11.363	0.74462								0	0	0	0.42693	1	4211	4211		1.0715	0.10919	1		+		9178	8998	4477	4499	11126	11126					0.011907902252232816
HCKLRCHK	8	Unmodified	_HCKLRCHK_					0	0	0			REV__nc|ENSG00000141068|Q8IVT5-4|KSR1	REV__nc|ENSG00000141068|Q8IVT5-4|KSR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	342.1556579470634	3	342.181229	1023.52186	1.4167	0.00048476	1.2013	0.00041105	2.6179	0.00089581	342.1807733475437	78.112	0.59066	79.863	79.622	80.213	1.7514					27	18	2	0	0	0	2.3239	1	32894	32894		0	0	1	498260	+		9179	10137	4478	4500	11127	11127					0.011038355731102456
HCKLRLPS	8	Unmodified	_HCKLRLPS_					0	0	0		AluYf1_dup91|chr1:154980524-154980825:+|1.0190371886422676|0.2721315892790703|1.9|429.0|14|1|anti-sense	AluYf1_dup91|chr1:154980524-154980825:+|1.0190371886422676|0.2721315892790703|1.9|429.0|14|1|anti-sense	AluYf1_dup91|chr1:154980524-154980825:+|1.0190371886422676|0.2721315892790703|1.9|429.0|14|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.2744628787041	2	477.271104	952.527655	4.865	0.0023219	1.1787	0.00056257	6.0437	0.0028845	477.27160585999707	90.005	0.57103	91.025	90.769	91.34	1.0199					43	17	3	0	0	0	0.89051	1	37925	37925		2.3027	1.5091	1	3185900			9180	58	4479	4501	11128	11128					0.04949257356429371
HCPAHSLH	8	Unmodified	_HCPAHSLH_					0	0	0		ACER1|p.N116Efs*52|1|0.04|ENSG00000167769|chr19:6312153-6312154|-/C|frameshift_variant	ACER1|p.N116Efs*52|1|0.04|ENSG00000167769|chr19:6312153-6312154|-/C|frameshift_variant	ACER1|p.N116Efs*52|1|0.04|ENSG00000167769|chr19:6312153-6312154|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412231326103	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8333	1	4.4569	3.9569	4.9569	0.62362								0	0	0	1.0178	1	1582	1582		0.45834	0	1				9181	17	4480	4502	11129	11129					-0.05173034779932095
HCPASSES	8	Unmodified	_HCPASSES_					0	0	0		ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant;ENSG00000139083|ENST00000396373|ETV6	ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant	ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.1613342165947	2	409.160885	816.307217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.07	1	105.07	104.57	105.57	0								0	0	0	1.0178	1	44515	44515		2.5775	0	1				9182	2863	4481	4503	11130	11130					-0.10828432761627482
HCRGYKRRN	9	Unmodified	_HCRGYKRRN_					0	0	0			REV__ENSG00000133019|ENST00000676153|CHRM3	REV__ENSG00000133019|ENST00000676153|CHRM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2092162966728	3	397.208835	1188.60468	0.87472	0.00034745	0.29262	0.00011623	1.1673	0.00046368	397.208333772295	88.425	0.39382	88.425	88.18	88.574	0					22	12	2	0	0	0	0.82114	1	36928	36928		2.4985	0.59211	1	3625600	+		9183	8221	4482	4504	11131	11131					0.017918686254915883
HCRGYKRRN	9	Unmodified	_HCRGYKRRN_					0	0	0			REV__ENSG00000133019|ENST00000676153|CHRM3	REV__ENSG00000133019|ENST00000676153|CHRM3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	397.208835	1188.60468	2.6715	0.0010611	-0.91964	-0.00036529	1.7519	0.00069585	397.2076018041003	88.258	0.37015	88.493	88.291	88.661	0.23471	-0.078533	-0.00081684	NaN	2.4985	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2991500	+		9184	8221	4482	4504							0.017918686254915883
HCRGYKRRN	9	Unmodified	_HCRGYKRRN_					0	0	0			REV__ENSG00000133019|ENST00000676153|CHRM3	REV__ENSG00000133019|ENST00000676153|CHRM3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	397.208835	1188.60468	4.5082	0.0017907	-1.0879	-0.00043211	3.4203	0.0013586	397.2071854290981	87.301	0.33986	88.797	88.611	88.951	1.4953	0.22516	-0.0010173	NaN	2.4985	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	407340	+		9185	8221	4482	4504							0.017918686254915883
HCSAGGVW	8	Unmodified	_HCSAGGVW_					0	0	0		CON__Q28085	CON__Q28085	CON__Q28085	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.6769592165947	2	408.676505	815.338458	2.066	0.00084434	-1.3401	-0.00054767	0.72592	0.00029667	408.6757268579722	62.249	0.34117	62.578	62.385	62.726	0.32974					18	10	2	0	0	0	0.89178	1	26080	26080		0.69038	0.69038	1	861480		+	9186	355	4483	4505	11132	11132					-0.07659814936891962
HDAEMSDC	8	Unmodified	_HDAEMSDC_					0	0	0			REV__ZBED9|p.N1045S|1|0.04|ENSG00000232040|chr6:28572755-28572755|T/C|missense_variant	REV__ZBED9|p.N1045S|1|0.04|ENSG00000232040|chr6:28572755-28572755|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	454.1518127322197	2	454.14966	906.284767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.627	1	87.861	87.361	88.361	0.23471								0	0	0	1.0178	1	36742	36742		0.69038	0.69038	1		+		9187	15937	4484	4506	11133	11133					-0.17212400221558255
HDDDRIHK	8	Unmodified	_HDDDRIHK_					0	0	0			REV__tr|A0A7D6ZZB7|A0A7D6ZZB7_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05660PE=4SV=1	REV__tr|A0A7D6ZZB7|A0A7D6ZZB7_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_05660PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	345.2386657595634	3	345.837062	1034.48936	-2.6214	-0.00090656	-0.76337	-0.000264	-3.3847	-0.0011706	345.83688303875437	11.711	0.42908	11.711	11.543	11.972	0					17	13	2	0	0	0	2.3239	1	4885	4885		0.35063	0	1	1208300	+		9188	15789	4485	4507	11134	11134					-0.026509570245480063
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5116454958916	3	381.512355	1141.51524	-1.6209	-0.0006184	-1.2012	-0.00045826	-2.8221	-0.0010767	381.512341337049	0.97899	1.6227	0.97899	-0.00030207	1.6224	0					149	79	2	0	0	0	0.46566	1	450	450		17.113	0.54702	1	5069800			9189	16932	4486	4508	11135	11135					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5117980837822	3	381.512355	1141.51524	-1.6183	-0.00061742	-1.9609	-0.00074809	-3.5792	-0.0013655	381.51217322987355	2.7082	2.1198	2.7082	1.4289	3.5486	0					189	92	4	0	0	0	0.44062	1	920	920		18.373	0.22675	1	2908400			9190	16932	4486	4508	11136	11136					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5127746462822	3	381.512355	1141.51524	-0.75121	-0.0002866	0.49376	0.00018837	-0.25745	-9.8222E-05	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.37668	4	12778	12304;12778;12997;13306		21.59	2.0414	1	2428000			9191	16932	4486	4508	11137;11138;11139;11140	11138					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5133239626884	3	381.512355	1141.51524	-0.044727	-1.7064E-05	-1.8058	-0.00068894	-1.8505	-0.00070601	381.51232757371633	50.352	2.3511	50.352	49.157	51.508	0					111	75	2	0	0	0	0.59568	1	21214	21214		11.495	0.6952	1	1469700			9192	16932	4486	4508	11141	11141					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5127136111259	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.46	1	24.46	23.96	24.96	0								0	0	0	0.26235	1	10201	10201		21.59	1.0092	1				9193	16932	4486	4508	11142	11142					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5132934451103	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.59	1	24.59	24.09	25.09	0								0	0	0	0.30245	1	10257	10257		18.373	2.224	1				9194	16932	4486	4508	11143	11143					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5126830935478	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.003	1	25.003	24.503	25.503	0								0	0	0	0.35083	1	10433	10433		13.615	0	1				9195	16932	4486	4508	11144	11144					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5114318728447	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.619	1	25.619	25.119	26.119	0								0	0	0	0.26235	1	10693	10693		21.59	1.9642	1				9196	16932	4486	4508	11145	11145					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5118896365166	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.266	1	26.266	25.766	26.766	0								0	0	0	0.33422	1	10967	10967		15.248	2.206	1				9197	16932	4486	4508	11146	11146					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5117980837822	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.377	1	26.377	25.877	26.877	0								0	0	0	0.30245	1	11016	11016		18.373	2.224	1				9198	16932	4486	4508	11147	11147					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5140258669853	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.372	1	39.372	38.872	39.872	0								0	0	0	0.33422	1	16501	16501		15.248	0	1				9199	16932	4486	4508	11148	11148					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5127441287041	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.152	1	40.152	39.652	40.652	0								0	0	0	0.33422	1	16824	16824		15.248	0	1				9200	16932	4486	4508	11149	11149					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5122558474541	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.071	1	43.071	42.571	43.571	0								0	0	0	0.39222	1	18030	18030		9.544	0	1				9201	16932	4486	4508	11150	11150					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119811892509	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.555	1	43.555	43.055	44.055	0								0	0	0	0.33422	1	18232	18232		15.248	0	1				9202	16932	4486	4508	11151	11151					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5129272341728	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.984	1	43.984	43.484	44.484	0								0	0	0	0.3648	1	18407	18407		12.241	0	1				9203	16932	4486	4508	11152	11152					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5108520388603	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.289	1	46.289	45.789	46.789	0								0	0	0	0.37945	1	19356	19356		10.8	2.0541	1				9204	16932	4486	4508	11153	11153					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5135070681572	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.361	1	48.361	47.861	48.861	0								0	0	0	0.31526	1	20199	20199		17.113	0.96379	1				9205	16932	4486	4508	11154	11154					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5122558474541	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.554	1	48.554	48.054	49.054	0								0	0	0	0.39222	1	20278	20278		9.544	0	1				9206	16932	4486	4508	11155	11155					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5126220583916	3	381.512355	1141.51524	0.98822	0.00037702	-2.4993	-0.00095352	-1.5111	-0.0005765	381.51213911796185	28.152	2.0719	28.424	28.059	30.131	0.27119					125	67	2	0	0	0	0.54255	1	12165	12165		13.615	1.4401	1	1409100			9207	16932	4486	4508	11156	11156					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5106384158134	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.794	1	27.056	26.556	27.556	0.26173								0	0	0	0.27844	1	11202	11202		20.415	5.1661	1				9208	16932	4486	4508	11157	11157					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5111266970634	3	381.512355	1141.51524	0.096957	3.699E-05	-3.6288	-0.0013844	-3.5318	-0.0013474	381.51123605439795	20.176	1.4503	21.301	20.796	22.247	1.1254					89	47	2	0	0	0	0.46566	2	8703	8401;8703		17.113	3.0737	1	1360700			9209	16932	4486	4508	11158;11159	11159					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5098449587822	3	381.512355	1141.51524	0.47591	0.00018157	-3.4865	-0.0013301	-3.0105	-0.0011486	381.5113313478704	23.025	1.6605	24.239	23.736	25.397	1.2145					71	53	2	0	0	0	0.50272	1	9816	9816		15.248	4.449	1	980710			9210	16932	4486	4508	11160	11160					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5120117068291	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9774	1	5.5987	5.0987	6.0987	0.62127								0	0	0	0.3648	1	2054	2054		12.241	4.0851	1				9211	16932	4486	4508	11161	11161					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5095092654228	3	381.512355	1141.51524	0.31982	0.00012202	-2.9958	-0.0011429	-2.676	-0.0010209	381.51152916285906	24.47	2.0064	26.154	24.719	26.726	1.6845					110	66	3	0	0	0	0.57699	1	9988	9988		12.241	2.0901	1	754460			9212	16932	4486	4508	11162	11162					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5118591189384	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.051	1	13.879	13.379	14.379	0.82789								0	0	0	0.27844	1	5411	5411		20.415	3.8487	1				9213	16932	4486	4508	11163	11163					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5089294314384	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.418	1	23.034	22.534	23.534	1.6158								0	0	0	0.40633	1	8928	8928		8.1555	3.2585	1				9214	16932	4486	4508	11164	11164					-0.04986107572904075
HDDEFSHKK	9	Unmodified	_HDDEFSHKK_					0	0	0		tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	tr|A0A7D6VTW1|A0A7D6VTW1_9CLOTNicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5094177126884	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.072	1	23.688	23.188	24.188	1.6158								0	0	0	0.40633	1	9208	9208		8.1555	0.54658	1				9215	16932	4486	4508	11165	11165					-0.04986107572904075
HDGCSTKWHV	10	Unmodified	_HDGCSTKWHV_					0	0	0			REV__ENST00000466652.1_1_1:167502528-167515399:-|nuORF	REV__ENST00000466652.1_1_1:167502528-167515399:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845336794853	3	390.510069	1168.50838	0.22596	8.824E-05	2.052	0.00080132	2.278	0.00088956	390.84376182912536	13.213	0.59514	13.312	13.027	13.622	0.09944					29	18	2	0	0	0	0.12549	1	5519	5519		3.5871	0	1	628140	+		9216	13241	4487	4509	11166	11166					-0.06913743725135646
HDGDARNQNF	10	Unmodified	_HDGDARNQNF_					0	0	0		tr|A0A553SLF0|A0A553SLF0_NIACITerDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20485PE=3SV=1	tr|A0A553SLF0|A0A553SLF0_NIACITerDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20485PE=3SV=1	tr|A0A553SLF0|A0A553SLF0_NIACITerDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20485PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2840759158134	3	391.839242	1172.4959	-0.13907	-5.4491E-05	0.17912	7.0186E-05	0.040053	1.5694E-05	392.17261497561293	11.14	0.14631	11.902	11.795	11.941	0.76165					6	4	2	0	0	0	0.12549	1	4642	4642		3.5871	1.8448	1	183660			9217	16330	4488	4510	11167	11167					-0.08345063863816904
HDGRKKTIL	9	Unmodified	_HDGRKKTIL_					0	0	0			REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	534.3212158083916	2	534.31964	1066.62473	1.1928	0.00063735	1.1554	0.00061734	2.3482	0.0012547	534.3215257330622	103.49	0.096367	103.49	103.41	103.5	0					9	4	4	0	0	0	0.83753	1	43451	43451		1.8442	0	1	20581000	+		9218	9704	4489	4511	11168	11168					0.0940794283710602
HDGRKKTIL	9	Unmodified	_HDGRKKTIL_					0	0	0			REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	REV__ENST00000490180.2_1_14:65197520-65198405:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	534.31964	1066.62473	1.1928	0.00063735	1.1554	0.00061734	2.3482	0.0012547	534.3215257330622	103.49	0.096367	103.49	103.41	103.5	0	-0.059358	0.0023713	NaN	1.8442	9	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20581000	+		9219	9704	4489	4511							0.0940794283710602
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5113403201103	3	381.511014	1141.51121	-1.6209	-0.0006184	2.3136	0.00088265	0.69264	0.00026425	381.512341337049	0.97899	1.6227	0.97899	-0.00030207	1.6224	0					149	79	2	0	0	0	0.48563	9	11	11;56;194;236;323;361;403;488;575		28.234	8.8501	1	5069800			9220	4073	4490	4512	11169;11170;11171;11172;11173;11174;11175;11176;11177	11169					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5105163455009	3	381.511014	1141.51121	-1.6183	-0.00061742	1.5539	0.00059282	-0.064465	-2.4594E-05	381.51217322987355	2.7082	2.1198	2.7082	1.4289	3.5486	0					189	92	4	0	0	0	0.38475	12	958	620;704;743;873;958;1084;1125;1209;1296;1335;1380;1426		34.222	12.632	1	2908400			9221	4073	4490	4512	11178;11179;11180;11181;11182;11183;11184;11185;11186;11187;11188;11189	11182					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119506716728	3	381.511014	1141.51121	-1.618	-0.00061728	0.90136	0.00034388	-0.71663	-0.0002734	381.51207025330694	4.0985	1.6746	4.0985	3.4265	5.1012	0					158	70	4	0	0	0	0.42796	3	1467	1467;1601;1691		31.636	10.046	1	1883900			9222	4073	4490	4512	11190;11191;11192	11190					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5111572146416	3	381.511014	1141.51121	-1.6183	-0.00061739	0.10759	4.1049E-05	-1.5107	-0.00057634	381.51160921533807	5.6705	1.5989	5.6705	4.5201	6.119	0					169	69	4	0	0	0	0.51067	3	2321	2278;2321;2456		27.088	2.2109	1	3874200			9223	4073	4490	4512	11193;11194;11195	11194					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5106994509697	3	381.511014	1141.51121	-1.6171	-0.00061692	-0.88241	-0.00033665	-2.4995	-0.00095357	381.51130096202644	7.5981	2.0999	7.5981	5.9543	8.0542	0					250	88	4	0	0	0	0.42124	3	2932	2581;2932;2975		32.037	16.299	1	3396000			9224	4073	4490	4512	11196;11197;11198	11197					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5101501345634	3	381.511014	1141.51121	-1.6184	-0.00061744	-1.0821	-0.00041283	-2.7005	-0.0010303	381.5112343734096	8.8674	1.722	8.8674	7.7247	9.4467	0					143	75	3	0	0	0	0.53402	3	3702	3663;3702;3788		26.021	5.428	1	4387900			9225	4073	4490	4512	11199;11200;11201	11200					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5102722048759	3	381.511014	1141.51121	-1.6209	-0.00061839	-0.36666	-0.00013988	-1.9876	-0.00075828	381.5112659643817	9.8606	1.5397	9.8606	9.4467	10.986	0					104	53	2	0	0	0	0.30136	8	4115	4013;4064;4115;4169;4220;4266;4309;4481		39.213	10.806	1	11284000			9226	4073	4490	4512	11202;11203;11204;11205;11206;11207;11208;11209	11204					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5117065310478	3	381.511014	1141.51121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6351	1	4.6351	4.1351	5.1351	0								0	0	0	0.42301	1	1904	1904		28.234	6.6435	1				9227	4073	4490	4512	11210	11210					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5109741091728	3	381.511014	1141.51121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7414	1	4.7414	4.2414	5.2414	0								0	0	0	0.64065	1	1948	1948		19.626	0	1				9228	4073	4490	4512	11211	11211					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5116454958916	3	381.511014	1141.51121	0.054861	2.093E-05	-1.8388	-0.00070151	-1.7839	-0.00068058	381.5106940845672	4.8869	1.3206	4.9749	4.2561	5.5768	0.08803					174	68	3	0	0	0	0.80072	1	2000	2000		12.175	0.68004	1	1115700			9229	4073	4490	4512	11212	11212					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5105468630791	3	381.511014	1141.51121	0.054149	2.0659E-05	-2.1096	-0.00080485	-2.0555	-0.00078419	381.51045234998406	5.7242	0.89588	5.8041	5.5686	6.4645	0.079923					97	49	2	0	0	0	0.78738	1	2509	2509		13.615	2.1202	1	1474800			9230	4073	4490	4512	11213	11213					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5102722048759	3	381.511014	1141.51121	0.054802	2.0908E-05	-2.3686	-0.00090364	-2.3138	-0.00088274	381.5105664412997	7.267	1.5554	7.3433	6.4404	7.9959	0.07632					178	91	3	0	0	0	0.78738	1	2676	2676		13.615	2.8154	1	1266100			9231	4073	4490	4512	11214	11214					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5099059939384	3	381.511014	1141.51121	0.054849	2.0925E-05	-2.1962	-0.00083789	-2.1414	-0.00081696	381.5105031695052	8.882	0.93085	8.9583	8.6021	9.533	0.07632					151	71	3	0	0	0	0.74074	1	3576	3576		16.566	3.5234	1	971840			9232	4073	4490	4512	11215	11215					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5109130740166	3	381.511014	1141.51121	0.054658	2.0853E-05	-2.226	-0.00084924	-2.1713	-0.00082839	381.51058650452956	9.9269	1.5067	10.005	9.3949	10.902	0.077971					164	64	3	0	0	0	0.30136	4	4075	3946;4075;4176;4214		39.213	10.02	1	4756800			9233	4073	4490	4512	11216;11217;11218;11219	11217					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5113403201103	3	381.511014	1141.51121	0.061526	2.3473E-05	-0.81883	-0.00031239	-0.75731	-0.00028892	381.5111925314169	11.514	1.7982	11.596	10.842	12.641	0.082325					135	58	3	0	0	0	0.38475	4	4742	4561;4742;4794;4848		34.222	10.421	1	6452300			9234	4073	4490	4512	11220;11221;11222;11223	11221					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5118896365166	3	381.511014	1141.51121	0.19803	7.5549E-05	-0.36401	-0.00013887	-0.16599	-6.3326E-05	381.51134444353505	14.465	4.0246	14.578	12.331	16.355	0.11295					244	129	2	0	0	0	0.42796	9	5520	5300;5520;5621;5854;5906;6063;6166;6462;6502		31.636	11.982	1	3205700			9235	4073	4490	4512	11224;11225;11226;11227;11228;11229;11230;11231;11232	11225					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5116454958916	3	381.511014	1141.51121	0.4194	0.00016001	-0.26673	-0.00010176	0.15267	5.8246E-05	381.5112020083188	17.474	4.5951	17.625	16.324	20.919	0.15093					252	157	2	0	0	0	0.38475	4	7414	7038;7414;7547;8096		34.222	15.078	1	3251900			9236	4073	4490	4512	11233;11234;11235;11236	11234					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5121948122978	3	381.511014	1141.51121	0.57045	0.00021763	0.31188	0.00011899	0.88234	0.00033662	381.5115824043653	21.017	2.0525	21.228	20.282	22.334	0.21024					132	66	3	0	0	0	0.67383	1	8676	8676		19.626	0.90473	1	2051000			9237	4073	4490	4512	11237	11237					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5116149783134	3	381.511014	1141.51121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.484	1	23.717	23.217	24.217	0.23306								0	0	0	0.59099	1	9794	9794		21.59	1.0092	1				9238	4073	4490	4512	11238	11238					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5123779177666	3	381.511014	1141.51121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.774	1	25.017	24.517	25.517	0.24251								0	0	0	0.50777	1	10341	10341		24.882	1.0918	1				9239	4073	4490	4512	11239	11239					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5109741091728	3	381.511014	1141.51121	-1.1539	-0.00044021	-0.62789	-0.00023955	-1.7817	-0.00067975	381.51106830842133	1.6695	1.5644	2.3228	2.1292	3.6937	0.65331					130	93	2	0	0	0	0.8251	1	654	654		9.544	0	1	831700			9240	4073	4490	4512	11240	11240					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5102111697197	3	381.511014	1141.51121	-1.1538	-0.00044018	-0.93566	-0.00035696	-2.0894	-0.00079714	381.5109525285608	3.8283	2.3664	4.4519	2.7819	5.1483	0.62362					214	148	2	0	0	0	0.80072	1	913	913		12.175	1.2758	1	966510			9241	4073	4490	4512	11241	11241					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5109130740166	3	381.511014	1141.51121	-1.1539	-0.00044024	-0.523	-0.00019953	-1.6769	-0.00063977	381.511067676409	6.4115	0.57496	7.0327	6.793	7.368	0.62127					58	38	2	0	0	0	0.8251	1	2602	2602		9.544	3.8121	1	704960			9242	4073	4490	4512	11242	11242					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5104858279228	3	381.511014	1141.51121	-1.1244	-0.00042897	-0.74238	-0.00028323	-1.8668	-0.00071219	381.51128310486564	9.995	4.1706	10.646	9.8234	13.994	0.65058					249	148	4	0	0	0	0.32544	10	4154	4154;4258;4398;4466;4597;5191;5239;5330;5488;5539		37.771	8.3342	1	7239100			9243	4073	4490	4512	11243;11244;11245;11246;11247;11248;11249;11250;11251;11252	11243					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5128051638603	3	381.511014	1141.51121	-0.70704	-0.00026975	-0.57838	-0.00022066	-1.2854	-0.0004904	381.51117960577915	14.231	2.3439	15	14.02	16.364	0.76937					157	83	2	0	0	0	0.55892	3	6264	5680;6264;6446		24.882	8.3157	1	1636800			9244	4073	4490	4512	11253;11254;11255	11254					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5115844607353	3	381.511014	1141.51121	-0.40373	-0.00015403	-0.1727	-6.5889E-05	-0.57643	-0.00021992	381.5113590926299	16.554	2.142	17.452	16.493	18.635	0.89794					150	109	2	0	0	0	0.67383	4	7185	6502;6778;7138;7185		19.626	6.7534	1	1342400			9245	4073	4490	4512	11256;11257;11258;11259	11259					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5113098025322	3	381.511014	1141.51121	-0.090453	-3.4509E-05	0.58938	0.00022485	0.49892	0.00019035	381.51156702553504	18.475	1.5676	19.454	19.147	20.715	0.97922					90	52	2	0	0	0	0.80072	1	8165	8165		12.175	0	1	1319900			9246	4073	4490	4512	11260	11260					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5105468630791	3	381.511014	1141.51121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.841	1	18.82	18.32	19.32	0.97922								0	0	0	0.59099	1	7428	7428		21.59	3.2171	1				9247	4073	4490	4512	11261	11261					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5092651247978	3	381.511014	1141.51121	-0.21258	-8.1103E-05	-1.8067	-0.00068929	-2.0193	-0.0007704	381.51086474042904	9.6978	0.99765	10.442	10.149	11.146	0.74462					82	35	4	0	0	0	0.44353	3	4142	4091;4142;4247		30.703	6.9024	1	6417600			9248	4073	4490	4512	11262;11263;11264	11263					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5112182497978	3	381.511014	1141.51121	-0.20053	-7.6506E-05	-1.1522	-0.00043956	-1.3527	-0.00051607	381.51097807764177	10.919	1.673	11.681	11.114	12.787	0.76165					109	58	2	0	0	0	0.74074	1	4739	4739		16.566	2.1605	1	1246200			9249	4073	4490	4512	11265	11265					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5112182497978	3	381.511014	1141.51121	-0.073973	-2.8222E-05	-2.299	-0.0008771	-2.373	-0.00090533	381.5104950262865	14.346	0.61043	15.242	14.805	15.415	0.89664					44	30	2	0	0	0	0.72157	1	5817	5817		17.443	2.1942	1	964280			9250	4073	4490	4512	11266	11266					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5115844607353	3	381.511014	1141.51121	0.042127	1.6072E-05	-0.79023	-0.00030148	-0.74811	-0.00028541	381.511076400695	16.807	1.268	18.109	17.878	19.146	1.3023					73	42	2	0	0	0	0.85617	1	7136	7136		6.1918	0.89496	1	677290			9251	4073	4490	4512	11267	11267					-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	381.511014	1141.51121	-1.1528	-0.00043982	-0.99377	-0.00037914	-2.1466	-0.00081896	381.51087520460595	9.047	0.20312	9.6836	9.6062	9.8093	0.63651	-0.22819	0.00022041	NaN	39.213	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567080			9252	4073	4490	4512							-0.05388197066622524
HDGSTDVQQR	10	Unmodified	_HDGSTDVQQR_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3;ENSG00000196436|ENST00000692376|NPIPB15;NPIPA5|p.A88_Q96del|1|0.47|ENSG00000183889|chr16:15370023-15370049|CCTGTCTACGGCAGTTGGACCTCCTGG/-|inframe_deletion;nc|ENSG00000183889|E9PKD4-2|NPIPA5;chr16:74378039-74381516|177|17.78|0.67|4.74|+|ENST00000429990|NPIPB15,NPIPB15;ENSG00000183889|ENST00000381497|NPIPA9;ENSG00000214940|ENST00000525596|NPIPA8;ENSG00000214967|ENST00000530217|NPIPA7;ENSG00000224712|ENST00000531598|NPIPA3;ENSG00000233024|ENST00000427999|NPIPA9;ENSG00000254852|ENST00000529166|NPIPA2;ENSG00000183426|ENST00000328085|NPIPA1;ENSG00000183793|ENST00000360151|NPIPA5;nc|ENSG00000254852|F8WFD2|NPIPA3;chr16:74381698-74385342|202|15.12|0.67|4.49|+|ENST00000429990|NPIPB15,NPIPB15	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	381.511014	1141.51121	-0.21263	-8.1121E-05	-1.2367	-0.00047183	-1.4494	-0.00055295	381.5113225322652	9.3534	0.14981	10.098	9.9988	10.149	0.74462	0.18622	-5.7658E-05	NaN	39.213	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213530			9253	4073	4490	4512							-0.05388197066622524
HDINYEELH	9	Unmodified	_HDINYEELH_					0	0	0			REV__tr|A0A553STM4|A0A553STM4_NIACIGlycosylhydrolasefamily88OS=NialliacirculansOX=1397GN=CEQ21_05420PE=4SV=1	REV__tr|A0A553STM4|A0A553STM4_NIACIGlycosylhydrolasefamily88OS=NialliacirculansOX=1397GN=CEQ21_05420PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	390.512244	1168.5149	-1.2856	-0.00050203	-0.58145	-0.00022706	-1.867	-0.0007291	390.5133477314281	13.436	1.2023	13.436	12.53	13.732	0					55	38	2	0	0	0	0.11837	1	5508	5508		4.897	1.31	1	829930	+		9254	15245	4491	4513	11268	11268					-0.06261527292781466
HDITLAELL	9	Unmodified	_HDITLAELL_					0	0	0			REV__ENSG00000183273|ENST00000327554|CCDC60	REV__ENSG00000183273|ENST00000327554|CCDC60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7883178591728	2	512.787307	1023.56006	1.6893	0.00086626	1.4327	0.00073469	3.1221	0.0016009	512.7876913375973	58.665	0.31906	60.083	59.941	60.26	1.4181					22	9	3	0	0	0	0.076627	1	24567	24567		57.471	0	1	5689300	+		9255	11385	4492	4514	11269	11269					0.04922323240418791
HDIVKKYK	8	Unmodified	_HDIVKKYK_					0	0	0		tr|A0A7D6VQE3|A0A7D6VQE3_9CLOTSerine/threonineproteinphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15020PE=4SV=1	tr|A0A7D6VQE3|A0A7D6VQE3_9CLOTSerine/threonineproteinphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15020PE=4SV=1	tr|A0A7D6VQE3|A0A7D6VQE3_9CLOTSerine/threonineproteinphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15020PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2061035037041	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.034	1	16.861	16.361	17.361	0.82643								0	0	0	1.0178	1	6665	6665		1.4819	0	1				9256	16793	4493	4515	11270	11270					0.08350039576839663
HDKDGKYLL	9	Unmodified	_HDKDGKYLL_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7914916872978	2	544.790381	1087.56621	0.61744	0.00033638	2.7055	0.0014739	3.3229	0.0018103	544.7918366492547	53.34	0.41628	55.31	55.147	55.563	1.9697					23	13	2	0	0	0	0.11643	1	22339	22339		43.858	1.7637	1	3976600	+		9257	10269	4494	4516	11271	11271					0.025928414719373905
HDMADTCV	8	Unmodified	_HDMADTCV_					0	0	0		PRPS1L1|p.D220H|1|0.05|ENSG00000229937|chr7:18027125-18027125|C/G|missense_variant	PRPS1L1|p.D220H|1|0.05|ENSG00000229937|chr7:18027125-18027125|C/G|missense_variant	PRPS1L1|p.D220H|1|0.05|ENSG00000229937|chr7:18027125-18027125|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.5070983767509	2	446.170395	890.326238	0.68799	0.00030696	2.9604	0.0013209	3.6484	0.0016278	446.1715453566683	12.56	0.9626	12.649	12.244	13.207	0.089381					49	30	2	0	0	0	2.3239	1	5196	5196		12.532	3.9383	1	1633600			9258	8064	4495	4517	11272	11272					-0.12331219462237186
HDPHSLHYH	9	Unmodified	_HDPHSLHYH_					0	0	0			REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5099365115166	3	381.509056	1141.50534	0.054996	2.0981E-05	2.9523	0.0011263	3.0073	0.0011473	381.510606562006	3.7294	1.3115	3.8314	2.9912	4.3027	0.10199					163	71	3	0	0	0	0.46566	1	1514	1514		17.113	1.8644	1	1234400	+		9259	8187	4496	4518	11273	11273					-0.059752507876282834
HDPHSLHYH	9	Unmodified	_HDPHSLHYH_					0	0	0			REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5106384158134	3	381.509056	1141.50534	0.054802	2.0908E-05	2.763	0.0010541	2.8178	0.001075	381.5105664412997	7.267	1.5554	7.3433	6.4404	7.9959	0.07632					178	91	3	0	0	0	0.67936	1	3219	3219		8.1555	1.9637	1	1266100	+		9260	8187	4496	4518	11274	11274					-0.059752507876282834
HDPHSLHYH	9	Unmodified	_HDPHSLHYH_					0	0	0			REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5105163455009	3	381.509056	1141.50534	0.054849	2.0925E-05	2.9353	0.0011199	2.9902	0.0011408	381.5105031695052	8.882	0.93085	8.9583	8.6021	9.533	0.07632					151	71	3	0	0	0	0.66458	1	3906	3906		8.7454	2.5536	1	971840	+		9261	8187	4496	4518	11275	11275					-0.059752507876282834
HDPHSLHYH	9	Unmodified	_HDPHSLHYH_					0	0	0			REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	REV__ENST00000494144.5_1_10:86177532-86230140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5099365115166	3	381.509056	1141.50534	-1.1528	-0.00043982	4.1378	0.0015786	2.985	0.0011388	381.51087520460595	9.047	0.20312	9.6836	9.6062	9.8093	0.63651					37	15	3	0	0	0	0.75101	1	3795	3795		5.2969	0.76802	1	567080	+		9262	8187	4496	4518	11276	11276					-0.059752507876282834
HDQKVCERE	9	Unmodified	_HDQKVCERE_					0	0	0		nc|ENSG00000100100|Q96FE7-5|PIK3IP1;ENSG00000100100|ENST00000215912|PIK3IP1;nc|ENSG00000100100|Q96FE7-3|PIK3IP1;ENST00000493034.1_1_22:31679072-31685925:-|nuORF;ENST00000480654.5_1_22:31679072-31685707:-|nuORF	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	nc|ENSG00000100100|Q96FE7-5|PIK3IP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5091735720634	3	381.845228	1142.51386	-0.21091	-8.0534E-05	-0.011019	-4.2077E-06	-0.22193	-8.4741E-05	381.8450536559794	9.6694	0.21668	10.414	10.231	10.448	0.74462					13	8	2	0	0	0	0.11654	1	3991	3991		10.151	1.995	1	812080			9263	1241	4497	4519	11277	11277					-0.05170064933327012
HDSDEVRER	9	Unmodified	_HDSDEVRER_					0	0	0			REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5122558474541	3	381.511014	1141.51121	-1.1533	-0.00044	-0.21029	-8.0227E-05	-1.3636	-0.00052023	381.51136013785384	8.0471	1.1783	8.6836	8.4279	9.6062	0.63651					125	84	3	0	0	0	0.62937	1	3272	3272		10.151	1.7063	1	1285100	+		9264	12116	4498	4520	11278	11278					-0.05388197066622524
HDSDEVRER	9	Unmodified	_HDSDEVRER_					0	0	0			REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5121337771416	3	381.511014	1141.51121	-0.21251	-8.1076E-05	-0.49407	-0.00018849	-0.70659	-0.00026957	381.5109626703383	1.2417	1.2917	1.9901	1.6526	2.9443	0.7484					120	78	3	0	0	0	0.77025	1	648	648		4.5289	0.94181	1	689450	+		9265	12116	4498	4520	11279	11279					-0.05388197066622524
HDSDEVRER	9	Unmodified	_HDSDEVRER_					0	0	0			REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	REV__ENST00000237841.5_1_12:3948629-3949796:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5108520388603	3	381.511014	1141.51121	-0.21274	-8.1162E-05	-0.79406	-0.00030294	-1.0068	-0.0003841	381.5108493065002	7.9671	0.33301	8.6978	8.4873	8.8203	0.73074					37	24	2	0	0	0	0.77025	1	3300	3300		4.5289	0.65253	1	292200	+		9266	12116	4498	4520	11280	11280					-0.05388197066622524
HDSFLFVTL	9	Unmodified	_HDSFLFVTL_					0	0	0		ENST00000262942.9_2_7:98942077-98946482:+|nuORF	ENST00000262942.9_2_7:98942077-98946482:+|nuORF	ENST00000262942.9_2_7:98942077-98946482:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7816650271416	2	539.782025	1077.5495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.716	1	59.685	59.185	60.185	1.969								0	0	0	0.061573	1	24209	24209		42.095	3.9434	1				9267	5638	4499	4521	11281	11281					0.013823405859966442
HDSYQWCPETS	11	Unmodified	_HDSYQWCPETS_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.5107299685478	3	451.511915	1351.51392	0.40343	0.00018216	-2.0587	-0.00092954	-1.6553	-0.00074738	451.5111739444497	12.06	0.92759	12.06	11.911	12.838	0					43	22	2	0	0	0	0.81657	4	5000	4952;5000;5083;5178		14.838	6.7282	1	5200400	+		9268	8711	4500	4522	11282;11283;11284;11285	11283					-0.14778109723965827
HDSYQWCPETS	11	Unmodified	_HDSYQWCPETS_					0	0	0			REV__ENSG00000069956|ENST00000261845|MAPK6	REV__ENSG00000069956|ENST00000261845|MAPK6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	451.2338744997978	3	451.511915	1351.51392	0.40343	0.00018216	-2.0587	-0.00092954	-1.6553	-0.00074738	451.5111739444497	12.06	0.92759	12.06	11.911	12.838	0					43	22	2	0	0	0	0.14606	1	5279	5279		4.7159	1.8726	1	5200400	+		9269	8711	4500	4522	11286	11286					-0.14778109723965827
HDYEVVFPH	9	Unmodified	_HDYEVVFPH_					0	0	0		nc|ENSG00000169224|Q5JQS6-2|GCSAML;ENSG00000169224|ENST00000366488|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5125915408134	3	381.513696	1141.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.887	1	24.887	24.387	25.387	0								0	0	0	0.26308	1	10383	10383		21.537	1.911	1				9270	4075	4501	4523	11287	11287					-0.045840180791856255
HDYEVVFPH	9	Unmodified	_HDYEVVFPH_					0	0	0		nc|ENSG00000169224|Q5JQS6-2|GCSAML;ENSG00000169224|ENST00000366488|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5125915408134	3	381.513696	1141.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.069	1	27.069	26.569	27.569	0								0	0	0	0.26308	1	11317	11317		21.537	3.1639	1				9271	4075	4501	4523	11288	11288					-0.045840180791856255
HDYEVVFPH	9	Unmodified	_HDYEVVFPH_					0	0	0		nc|ENSG00000169224|Q5JQS6-2|GCSAML;ENSG00000169224|ENST00000366488|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5125915408134	3	381.513696	1141.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.741	1	39.741	39.241	40.241	0								0	0	0	0.32506	1	16655	16655		16.149	0.90062	1				9272	4075	4501	4523	11289	11289					-0.045840180791856255
HDYEVVFPH	9	Unmodified	_HDYEVVFPH_					0	0	0		nc|ENSG00000169224|Q5JQS6-2|GCSAML;ENSG00000169224|ENST00000366488|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5124999880791	3	381.513696	1141.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.863	1	39.863	39.363	40.363	0								0	0	0	0.3648	1	16706	16706		12.241	1.3417	1				9273	4075	4501	4523	11290	11290					-0.045840180791856255
HDYEVVFPH	9	Unmodified	_HDYEVVFPH_					0	0	0		nc|ENSG00000169224|Q5JQS6-2|GCSAML;ENSG00000169224|ENST00000366488|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	nc|ENSG00000169224|Q5JQS6-2|GCSAML	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5140563845634	3	381.513696	1141.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.687	1	48.687	48.187	49.187	0								0	0	0	0.40033	1	20332	20332		8.7454	1.1365	1				9274	4075	4501	4523	11291	11291					-0.045840180791856255
HEEDDDDDDD	10	Unmodified	_HEEDDDDDDD_					0	0	0		ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1876098513603	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0634	1	5.1515	4.6515	5.6515	0.08803								0	0	0	0.66264	1	2093	2093		0	0	1				9275	2438	4502	4524	11292	11292					-0.2571739363240795
HEEDDDDDDD	10	Unmodified	_HEEDDDDDDD_					0	0	0		ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1779052615166	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8555	1	3.4897	2.9897	3.9897	0.63417								0	0	0	0.66264	1	1176	1176		0	0	1				9276	2438	4502	4524	11293	11293					-0.2571739363240795
HEEDDDDDDD	10	Unmodified	_HEEDDDDDDD_					0	0	0		ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	ENSG00000130528|ENST00000252825|HRC	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1787597537041	2	610.178908	1218.34326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5333	1	5.1545	4.6545	5.6545	0.62127								0	0	0	0.66264	1	1871	1871		0	0	1				9277	2438	4502	4524	11294	11294					-0.2571739363240795
HEEKMWRQEQR	11	Unmodified	_HEEKMWRQEQR_					0	0	0		ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.5840331912041	3	519.584408	1555.73139	0.48833	0.00025373	-1.3329	-0.00069257	-0.84461	-0.00043884	519.5839372109491	15.187	0.34512	15.3	15.131	15.476	0.11295					41	10	6	0	0	0	1.0254	1	6283	6283		2.2527	0.32522	1	22604000			9278	5423	4503	4525	11295	11295					-0.024242947307129725
HEEKMWRQEQR	11	Unmodified	_HEEKMWRQEQR_					0	0	0		ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.5837890505791	3	519.584408	1555.73139	0.26411	0.00013723	-1.5943	-0.00082836	-1.3302	-0.00069113	519.5836593884144	14.656	0.34683	15.425	15.233	15.58	0.76937					40	11	5	0	0	0	1.0365	1	6113	6113		1.2148	0.80657	1	13095000			9279	5423	4503	4525	11296	11296					-0.024242947307129725
HEEKMWRQEQR	11	Unmodified	_HEEKMWRQEQR_					0	0	0		ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	ENSG00000261649|ENST00000567390|GOLGA6L7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.5842773318291	3	519.584408	1555.73139	0.24545	0.00012753	-1.5996	-0.00083115	-1.3542	-0.00070362	519.5836573407021	14.645	0.29949	15.542	15.352	15.651	0.89664					39	11	5	0	0	0	1.0365	1	6094	6094		1.2148	0.76031	1	7763000			9280	5423	4503	4525	11297	11297					-0.024242947307129725
HEEQMVPL	8	Unmodified	_HEEQMVPL_					0	0	0			REV__nc|ENSG00000001461|Q6P499-2|NIPAL3	REV__nc|ENSG00000001461|Q6P499-2|NIPAL3	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1609069705009	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.974	1	25.226	24.726	25.726	0.25197								0	0	0	1.0178	1	10425	10425		1.8442	1.3859	1		+		9281	8478	4504	4526	11298	11298					-0.03250451733936188
HEEWDFFHV	9	Unmodified	_HEEWDFFHV_					0	0	0			REV__ENSG00000002587|ENST00000002596|HS3ST1	REV__ENSG00000002587|ENST00000002596|HS3ST1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	415.2637817263603	3	415.848967	1244.52507	4.1931	0.0017437	-2.6705	-0.0011105	1.5225	0.00063314	416.18201807974845	87.313	0.15557	88.405	88.304	88.459	1.0918					9	4	3	0	0	0	0.11938	1	36824	36824		0.26902	0.1097	1	326190	+		9282	8480	4505	4527	11299	11299					-0.08740919567549099
HEGISRQGK	9	Unmodified	_HEGISRQGK_					0	0	0		ENST00000413379.7_1_19:47712517-47712769:+|nuORF	ENST00000413379.7_1_19:47712517-47712769:+|nuORF	ENST00000413379.7_1_19:47712517-47712769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7751647830009	2	506.270147	1010.52574	0.56745	0.00028728	-1.7814	-0.00090189	-1.214	-0.0006146	506.26669631558775	13.497	0.65401	13.596	13.312	13.966	0.09944					42	20	3	0	0	0	0.46905	1	5585	5585		16.942	2.104	1	1397500			9283	6393	4506	4528	11300	11300					0.02089919872196333
HEHGCFVK	8	Carbamidomethyl (C)	_HEHGC(Carbamidomethyl (C))FVK_	HEHGC(1)FVK		HEHGC(44)FVK		0	1	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.4909240603447	3	338.492238	1012.45488	-2.7926	-0.00094526	-0.95676	-0.00032385	-3.7493	-0.0012691	338.4919816359684	13.563	1.173	13.563	13.239	14.412	0					101	37	5	0	0	0	0.55531	2	5661	5622;5661		43.858	23.405	1	29661000	+		9284	9101	4507	4529	11301;11302	11302					-0.050844964369730405
HEHKSVLI	8	Unmodified	_HEHKSVLI_					0	0	0			REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	962.5491821169853	1	962.541791	961.534515	3.2651	0.0031428	4.1966	0.0040394	7.4618	0.0071822	962.5453649174108	103.41	0.059204	103.59	103.56	103.62	0.18066					4	2	2	0	0	0	0.89008	1	43546	43546		2.5775	0.27475	1	19400000	+		9285	12811	4508	4530	11303	11303					0.05220893508669633
HEHKSVLI	8	Unmodified	_HEHKSVLI_					0	0	0			REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	962.541791	961.534515	2.5637	0.0024676	7.7874	0.0074957	10.351	0.0099633	962.5480802628355	103.45	0.062149	103.61	103.56	103.62	0.16445	0.012564	0.0028852	NaN	2.5775	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5905400	+		9286	12811	4508	4530							0.05220893508669633
HEHKSVLI	8	Unmodified	_HEHKSVLI_					0	0	0			REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	REV__ENST00000393445.7_1_2:100017150-100017303:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	962.541791	961.534515	3.2651	0.0031428	4.1966	0.0040394	7.4618	0.0071822	962.5453649174108	103.41	0.059204	103.59	103.56	103.62	0.18066	-0.012564	-0.00057106	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19400000	+		9287	12811	4508	4530							0.05220893508669633
HEIFAKLIV	9	Unmodified	_HEIFAKLIV_					0	0	0			REV__ENST00000358506.6_1_2:29023559-29023673:+|nuORF	REV__ENST00000358506.6_1_2:29023559-29023673:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.7895385622978	2	535.32386	1068.63317	2.4602	0.001317	-4.0426	-0.0021641	-1.5824	-0.00084709	535.8233340712039	65.843	0.33678	67.242	66.973	67.31	1.3989					13	10	2	0	0	0	0.10844	1	27602	27602		3.9444	0	1	940430	+		9288	12573	4509	4531	11304	11304					0.10159496753703934
HEIFAKLIV	9	Unmodified	_HEIFAKLIV_					0	0	0			REV__ENST00000358506.6_1_2:29023559-29023673:+|nuORF	REV__ENST00000358506.6_1_2:29023559-29023673:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	535.7884399294853	2	535.32386	1068.63317	2.0035	0.0010725	-1.8921	-0.0010129	0.11138	5.9626E-05	535.3236424876685	65.285	0.15351	67.194	67.126	67.28	1.9085					6	4	2	0	0	0	0.10844	1	27418	27418		7.2892	0	1	426790	+		9289	12573	4509	4531	11305	11305					0.10159496753703934
HEKELARKEQ	10	Unmodified	_HEKELARKEQ_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4;ENST00000435830.6_1_3:37354991-37360805:+|nuORF	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.9212219119072	4	317.674289	1266.66805	-1.5863	-0.00050391	-2.2493	-0.00071456	-3.8356	-0.0012185	317.67365346968467	11.45	0.092834	12.119	12.045	12.138	0.66934					4	2	2	0	0	0	0.12486	1	4751	4751		7.0371	0	1	389410			9290	3088	4510	4532	11306	11306					0.04538087823721071
HEKHPDEKVK	10	Unmodified	_HEKHPDEKVK_					0	0	0		tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2223693728447	3	416.222805	1245.64658	-0.33338	-0.00013876	2.0778	0.00086482	1.7444	0.00072606	416.22391453757007	12.639	0.36961	13.333	13.167	13.536	0.69396					16	11	3	0	0	0	0.86348	1	5260	5260		5.4027	0.5057	1	425080			9291	16841	4511	4533	11307	11307					0.033587027949806725
HEKLEHMKTWK	11	Unmodified	_HEKLEHMKTWK_					0	0	0			REV__ARPC1B|p.V45M|1|0.32|ENSG00000130429|chr7:99386753-99386753|G/A|missense_variant	REV__ARPC1B|p.V45M|1|0.32|ENSG00000130429|chr7:99386753-99386753|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.5916931033134	3	489.590611	1465.75	0.91896	0.00044992	1.7096	0.00083698	2.6285	0.0012869	489.5913894867563	13.101	0.25285	13.201	13.059	13.312	0.09944					22	7	4	0	0	0	0.85967	1	5420	5420		6.6235	0.75532	1	6681800	+		9292	8144	4512	4534	11308	11308					0.035758669111146446
HEKLEHMKTWK	11	Unmodified	_HEKLEHMKTWK_					0	0	0			REV__ARPC1B|p.V45M|1|0.32|ENSG00000130429|chr7:99386753-99386753|G/A|missense_variant	REV__ARPC1B|p.V45M|1|0.32|ENSG00000130429|chr7:99386753-99386753|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	489.590611	1465.75	0.91896	0.00044992	1.7096	0.00083698	2.6285	0.0012869	489.5913894867563	13.101	0.25285	13.201	13.059	13.312	0.09944	-0.11148	-0.00073309	NaN	6.6235	22	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6681800	+		9293	8144	4512	4534							0.035758669111146446
HELEALLDFHH	11	Unmodified	_HELEALLDFHH_					0	0	0			REV__ENST00000517612.5_1_8:59498999-59503485:-|nuORF	REV__ENST00000517612.5_1_8:59498999-59503485:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	453.9443542361259	3	454.226326	1359.65715	0.76057	0.00034547	2.0878	0.00094833	2.8484	0.0012938	454.2273940865838	12.525	0.12516	12.615	12.522	12.648	0.089381					7	3	3	0	0	0	0.14606	1	5203	5203		1.3296	0	1	332390	+		9294	8582	4513	4535	11309	11309					-0.008293145506058863
HENILFLSI	9	Unmodified	_HENILFLSI_					0	0	0		TMEM45A|p.T222S|1|0.21|ENSG00000181458|chr3:100568897-100568897|A/T|missense_variant	TMEM45A|p.T222S|1|0.21|ENSG00000181458|chr3:100568897-100568897|A/T|missense_variant	TMEM45A|p.T222S|1|0.21|ENSG00000181458|chr3:100568897-100568897|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3033935427666	2	543.303124	1084.5917	2.5835	0.0014036	-1.6559	-0.00089964	0.92765	0.00050399	543.3019162571022	63.479	0.32093	65.423	65.216	65.537	1.9444					26	9	3	0	0	0	0.024001	1	26629	26629		96.111	13.582	1	4300400			9295	16027	4514	4536	11310	11310					0.05278315994382865
HENISNSTSFK	11	Unmodified	_HENISNSTSFK_					0	0	0		ENSG00000164252|ENST00000312916|AGGF1	ENSG00000164252|ENST00000312916|AGGF1	ENSG00000164252|ENST00000312916|AGGF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	422.5432922244072	3	421.87032	1262.58913	-0.21529	-9.0825E-05	0.50435	0.00021277	0.28906	0.00012194	421.87166275010264	17.155	0.40602	17.155	16.941	17.347	0					22	12	2	0	0	0	0.14606	1	7087	7087		4.4062	0.81909	1	362600			9296	3765	4515	4537	11311	11311					-0.031661842012454144
HEREYLFDYKI	11	Unmodified	_HEREYLFDYKI_					0	0	0			REV__QRFPR|p.K196R|1|0.05|ENSG00000186867|chr4:121333031-121333031|T/C|missense_variant	REV__QRFPR|p.K196R|1|0.05|ENSG00000186867|chr4:121333031-121333031|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.9423400759697	4	378.942496	1511.74088	-0.16042	-6.0791E-05	0.57808	0.00021906	0.41765	0.00015827	378.9424336122585	12.537	0.33361	13.324	13.124	13.458	0.78751					28	10	4	0	0	0	1.0362	1	5225	5225		0.45452	0	1	2286500	+		9297	14609	4516	4538	11312	11312					0.005477968264813171
HERHRDRER	9	Unmodified	_HERHRDRER_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7;ENST00000537641.5_1_11:61178417-61183276:-|nuORF	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0924	1	4.0924	3.5924	4.5924	0								0	0	0	0.42693	1	1682	1682		0.26902	0	1				9298	3244	4517	4539	11313	11313					0.011725065495966192
HERHRDRER	9	Unmodified	_HERHRDRER_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7;ENST00000537641.5_1_11:61178417-61183276:-|nuORF	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890258669853	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.851	1	28.851	28.351	29.351	0								0	0	0	0.42693	1	12075	12075		0.26902	0	1				9299	3244	4517	4539	11314	11314					0.011725065495966192
HESPILLSL	9	Unmodified	_HESPILLSL_					0	0	0			REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7906982302666	2	504.78985	1007.56515	1.3036	0.00065803	0.90462	0.00045664	2.2082	0.0011147	504.7903377623838	52.171	0.40548	53.568	53.368	53.774	1.3966					30	12	3	0	0	0	0.076627	1	21844	21844		57.471	3.8958	1	5122200	+		9300	8856	4518	4540	11315	11315					0.06166627103061728
HESYRDSSRH	10	Unmodified	_HESYRDSSRH_					0	0	0		ENST00000413366.7_1_17:64804688-64804799:+|nuORF	ENST00000413366.7_1_17:64804688-64804799:+|nuORF	ENST00000413366.7_1_17:64804688-64804799:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	425.1937438845634	3	425.193797	1272.55956	-0.22233	-9.4533E-05	0.91034	0.00038707	0.68801	0.00029254	425.19417593992944	14.92	0.15551	14.92	14.812	14.967	0					8	4	2	0	0	0	0.89803	1	6203	6203		0.69767	0	1	387730			9301	6392	4519	4541	11316	11316					-0.06581703426718377
HETATVQQNN	10	Unmodified	_HETATVQQNN_					0	0	0		tr|A0A553SKJ6|A0A553SKJ6_NIACIRibosomalproteinL11methyltransferaseOS=NialliacirculansOX=1397GN=prmAPE=3SV=1	tr|A0A553SKJ6|A0A553SKJ6_NIACIRibosomalproteinL11methyltransferaseOS=NialliacirculansOX=1397GN=prmAPE=3SV=1	tr|A0A553SKJ6|A0A553SKJ6_NIACIRibosomalproteinL11methyltransferaseOS=NialliacirculansOX=1397GN=prmAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	571.5560180544853	2	571.265259	1140.51596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.348	1	14.074	13.574	14.574	0.72639								0	0	0	0.66087	1	5542	5542		2.9952	0.93549	1				9302	16293	4520	4542	11317	11317					-0.04867312923852296
HETGEVFEML	10	Unmodified	_HETGEVFEML_					0	0	0			REV__nc|ENSG00000172508|A5YM72-2|CARNS1	REV__nc|ENSG00000172508|A5YM72-2|CARNS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	596.2712280154228	2	596.271164	1190.52777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.686	1	85.323	84.823	85.823	1.6379								0	0	0	0.64929	1	35101	35101		14.838	2.3067	1		+		9303	11070	4521	4543	11318	11318					-0.05986832224880345
HEWAHLRWGV	10	Unmodified	_HEWAHLRWGV_					0	0	0		ENSG00000016490|ENST00000394711|CLCA1;ENSG00000016602|ENST00000370563|CLCA4;ENSG00000137975|ENST00000370565|CLCA2	ENSG00000016490|ENST00000394711|CLCA1	ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878051638603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.27	1	110.43	109.93	110.93	0.16133								0	0	0	0.66264	1	47904	47904		0	0	1				9304	603	4522	4544	11319	11319					0.008538634428532532
HEWVYSFPLPL	11	Unmodified	_HEWVYSFPLPL_					0	0	0			REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	REV__ENST00000572841.1_1_17:2279931-2282811:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3544189333916	2	694.355888	1386.69722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.13	1	119.13	118.63	119.63	0								0	0	0	0.63775	1	51310	51310		3.2813	0.28607	1		+		9305	13970	4523	4545	11320	11320					0.01934232120015622
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.9250366091728	3	518.925316	1553.75412	0.73455	0.00038118	-1.2167	-0.00063139	-0.48218	-0.00025021	518.9250061475844	12.731	0.67841	12.731	12.498	13.177	0					69	21	6	0	0	0	0.89803	1	5234	5234		0.69767	0.24315	1	57161000	+		9306	12600	4524	4546	11321	11321					-0.0006086276027872373
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	777.8838378787041	2	777.884336	1553.75412	0.58771	0.00045717	-2.5245	-0.0019638	-1.9368	-0.0015066	777.8829022985266	12.711	0.18598	12.711	12.622	12.808	0					12	5	3	0	0	0	0.89803	1	5269	5269		0.40072	0.050084	1	649340	+		9307	12600	4524	4546	11322	11322					-0.0006086276027872373
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	518.9250366091728	3	518.925316	1553.75412	0.34662	0.00017987	-1.1693	-0.00060678	-0.82269	-0.00042691	518.924910580908	12.605	0.31138	12.694	12.522	12.834	0.089381					32	9	6	0	0	0	0.89803	1	5222	5222		0.69767	0.24315	1	15048000	+		9308	12600	4524	4546	11323	11323					-0.0006086276027872373
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1396972537041	3	518.925316	1553.75412	0.74934	0.00038885	-0.72842	-0.000378	0.020917	1.0854E-05	519.2592385008248	20.077	0.15875	20.287	20.155	20.314	0.21024					7	4	2	0	0	0	0.12561	1	8341	8341		0.13989	0.056541	1	182870	+		9309	12600	4524	4546	11324	11324					-0.0006086276027872373
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1395141482353	3	518.925316	1553.75412	0.34662	0.00017987	-1.1693	-0.00060678	-0.82269	-0.00042691	518.924910580908	12.605	0.31138	12.694	12.522	12.834	0.089381					32	9	6	0	0	0	0.1256	1	5169	5169		0.69767	0.24315	1	15048000	+		9310	12600	4524	4546	11325	11325					-0.0006086276027872373
HEWWRWRGRW	10	Unmodified	_HEWWRWRGRW_					0	0	0			REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	REV__ENST00000361226.7_1_9:35546604-35546643:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	518.925316	1553.75412	0.17555	9.1099E-05	-1.8202	-0.00094453	-1.6446	-0.00085343	518.9245438112364	12.073	0.15629	12.86	12.752	12.908	0.78751	0.055647	-0.00058538	NaN	0.69767	15	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5398000	+		9311	12600	4524	4546							-0.0006086276027872373
HEYEKEKRK	9	Unmodified	_HEYEKEKRK_					0	0	0			REV__ENSG00000070444|ENST00000174618|MNT	REV__ENSG00000070444|ENST00000174618|MNT	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	415.8448058962822	3	416.222805	1245.64658	-0.54758	-0.00022791	1.9464	0.00081013	1.3988	0.00058222	416.22374467893934	13.336	0.46548	13.336	13.021	13.487	0					25	14	3	0	0	0	0.11837	1	5431	5431		4.897	1.31	1	1706000	+		9312	8718	4525	4547	11326	11326					0.033587027949806725
HFDDDEQWTK	10	Unmodified	_HFDDDEQWTK_					0	0	0		ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	440.8566161990166	3	440.854558	1319.54184	0.6334	0.00027924	2.2901	0.0010096	2.9235	0.0012888	440.8556970056573	12.389	0.71601	12.478	12.118	12.834	0.089381					63	22	5	0	0	0	0.82019	1	5188	5188		5.7834	1.9071	1	18598000			9313	3258	4526	4548	11327	11327					-0.10514463472236457
HFDDDEQWTK	10	Unmodified	_HFDDDEQWTK_					0	0	0		ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	ENSG00000149968|ENST00000299855|MMP3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	440.854558	1319.54184	0.19589	8.636E-05	2.8664	0.0012637	3.0623	0.00135	440.8560459353282	11.826	0.43578	12.613	12.505	12.941	0.78751	0.11916	0.00024224	NaN	5.7834	32	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3328600			9314	3258	4526	4548							-0.10514463472236457
HFDEDENWTK	10	Unmodified	_HFDEDENWTK_					0	0	0		MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant;ENSG00000137675|ENST00000260229|MMP27	MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant	MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	440.8567687869072	3	440.854558	1319.54184	0.6334	0.00027924	2.2901	0.0010096	2.9235	0.0012888	440.8556970056573	12.389	0.71601	12.478	12.118	12.834	0.089381					63	22	5	0	0	0	0.846	2	5100	5100;5257		3.8763	0	1	18598000			9315	2783	4527	4549	11328;11329	11328					-0.10514463472236457
HFDEDENWTK	10	Unmodified	_HFDEDENWTK_					0	0	0		MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant;ENSG00000137675|ENST00000260229|MMP27	MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant	MMP27|p.F298Lfs*20|1|0.19|ENSG00000137675|chr11:102696382-102696382|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.8558227419853	3	440.854558	1319.54184	-0.025532	-1.1256E-05	2.7285	0.0012029	2.703	0.0011916	440.8559520594733	11.925	0.50072	12.619	12.479	12.98	0.69396					46	15	5	0	0	0	0.87699	2	5069	4998;5069		1.9064	0	1	5657100			9316	2783	4527	4549	11330;11331	11331					-0.10514463472236457
HFDKKIRFWDI	11	Unmodified	_HFDKKIRFWDI_					0	0	0		ENST00000473865.1_1_2:234198871-234200845:+|nuORF;ENST00000479942.5_1_2:234198871-234202993:+|nuORF;nc|ENSG00000085978|Q676U5-4|ATG16L1;nc|ENSG00000085978|Q676U5-5|ATG16L1;nc|ENSG00000085978|Q676U5-2|ATG16L1;ENSG00000085978|ENST00000392017|ATG16L1	ENST00000473865.1_1_2:234198871-234200845:+|nuORF	ENST00000473865.1_1_2:234198871-234200845:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1505.806811511517	1	1504.80594	1503.79867	-0.39086	-0.00058816	-2.1222	-0.0031935	-2.5131	-0.0037817	1505.8041167368178	28.311	0.15162	30.086	30.031	30.183	1.7754					6	4	2	0	0	0	1.0393	1	11871	11871		0.35063	0	1	2961900			9317	1068	4528	4550	11332	11332					0.0669210354255938
HFFDHMHWRPW	11	Unmodified	_HFFDHMHWRPW_					0	0	0			REV__ENSG00000185313|ENST00000449082|SCN10A	REV__ENSG00000185313|ENST00000449082|SCN10A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1915771365166	3	532.575295	1594.70406	1.3539	0.00072104	3.803	0.0020254	5.1569	0.0027464	532.5780290362358	31.645	0.15691	31.645	31.503	31.66	0					5	4	2	0	0	0	0.14606	1	13213	13213		0.50596	0.43269	1	231550	+		9318	11459	4529	4551	11333	11333					-0.06950733480448434
HFGATEECR	9	Unmodified	_HFGATEECR_					0	0	0			REV__ENST00000377245.8_3_9:71789208-71827482:+|nuORF	REV__ENST00000377245.8_3_9:71789208-71827482:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2260009646416	2	525.227091	1048.43963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.176	1	19.155	18.655	19.655	0.97922								0	0	0	0.42693	1	7568	7568		3.9444	1.3669	1		+		9319	12727	4530	4552	11334	11334					-0.08265408024840326
HFGIKTLEEIK	11	Unmodified	_HFGIKTLEEIK_					0	0	0		nc|ENSG00000214558|P0DQW0|ZC3H11C;ENSG00000215817|ENST00000651890|ZC3H11B	nc|ENSG00000214558|P0DQW0|ZC3H11C	nc|ENSG00000214558|P0DQW0|ZC3H11C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.9175903201103	3	438.918722	1313.73434	0.22655	9.9436E-05	-2.785	-0.0012224	-2.5585	-0.001123	438.91834166769723	16.165	0.28544	16.165	16.087	16.373	0					13	8	2	0	0	0	0.65349	1	6725	6725		19.626	1.7628	1	703570			9320	5261	4531	4553	11335	11335					0.09001903665762256
HFHPDDSH	8	Unmodified	_HFHPDDSH_					0	0	0			REV__CASP7|p.Q276H|1|0.06|ENSG00000165806|chr10:113729456-113729456|G/T|missense_variant	REV__CASP7|p.Q276H|1|0.06|ENSG00000165806|chr10:113729456-113729456|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.4552795290947	2	496.204473	990.394393	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.519	1	11.281	10.781	11.781	0.76165								0	0	0	1.0178	1	4374	4374		0.79363	0	1		+		9321	8179	4532	4554	11336	11336					-0.10118890495721189
HFHPSVALF	9	Unmodified	_HFHPSVALF_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7791625857353	2	527.777077	1053.5396	2.2113	0.0011671	-0.24096	-0.00012717	1.9703	0.0010399	527.7769488961862	41.536	0.41552	42.862	42.65	43.066	1.3254					25	12	3	0	0	0	0.11478	1	17410	17410		44.407	21.259	1	891010			9322	1937	4533	4555	11337	11337					0.014971973712817999
HFHPSVALF	9	Unmodified	_HFHPSVALF_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7786132693291	2	527.777077	1053.5396	2.1174	0.0011175	-0.42444	-0.00022401	1.693	0.00089351	527.7767376403556	41.099	0.41143	42.992	42.768	43.179	1.8927					24	12	3	0	0	0	0.20838	1	17228	17228		32.117	13.982	1	758670			9323	1937	4533	4555	11338	11338					0.014971973712817999
HFHRMEKA	8	Unmodified	_HFHRMEKA_					0	0	0		ENST00000562941.1_1_16:29473130-29474884:+|nuORF;ENST00000562257.5_1_16:30212387-30214357:+|nuORF;nc|ENSG00000261052|P0DMM9-2|SULT1A3;ENST00000569959.5_1_16:30212049-30214229:+|nuORF;ENSG00000261052|ENST00000338971|SULT1A3;ENSG00000213648|ENST00000360423|SULT1A4;nc|ENSG00000261052|P0DMM9-3|SULT1A3	ENST00000562941.1_1_16:29473130-29474884:+|nuORF	ENST00000562941.1_1_16:29473130-29474884:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.2625610232353	2	528.26381	1054.51307	0.53534	0.0002828	-1.0338	-0.00054613	-0.49848	-0.00026333	528.263011108462	16.428	0.45945	16.565	16.247	16.707	0.13736					30	16	2	0	0	0	0.86202	1	6844	6844		15.768	3.2367	1	883480			9324	5226	4534	4556	11339	11339					-0.012008147916958478
HFIAEHYMF	9	Unmodified	_HFIAEHYMF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7750121951103	2	597.773677	1193.5328	2.2844	0.0013656	0.33932	0.00020284	2.6237	0.0015684	597.7737547577259	41.453	0.44791	42.778	42.556	43.004	1.3254					38	13	4	0	0	0	0.028763	2	17379	17334;17379		89.427	66.691	1	2421000			9325	3050	4535	4557	11340;11341	11341					-0.05622483571619341
HFIAEHYMF	9	Unmodified	_HFIAEHYMF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.7752563357353	2	597.773677	1193.5328	2.0674	0.0012358	0.25974	0.00015527	2.3271	0.0013911	597.7738766947921	41.016	0.41411	42.909	42.705	43.119	1.8927					36	12	4	0	0	0	0.0045981	2	17175	17175;17224		123.1	103.84	1	2534000			9326	3050	4535	4557	11342;11343	11342					-0.05622483571619341
HFIRMFTL	8	Unmodified	_HFIRMFTL_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|133|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|133|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|133|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7914306521416	2	532.78913	1063.56371	2.1587	0.0011501	0.58626	0.00031235	2.745	0.0014625	532.7895162626795	48.767	0.5561	50.744	50.422	50.978	1.9772					57	17	5	0	0	0	0.35773	1	20456	20456		63.563	7.3858	1	20749000			9327	7598	4536	4558	11344	11344					0.034467145332882865
HFISLYYVF	9	Unmodified	_HFISLYYVF_					0	0	0			REV__tr|A0A553ST78|A0A553ST78_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04375PE=3SV=1	REV__tr|A0A553ST78|A0A553ST78_NIACIPucRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04375PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8044921755791	2	594.808042	1187.60153	0.82453	0.00049044	-3.6391	-0.0021646	-2.8146	-0.0016742	594.8054847229952	50.515	0.38923	52.49	52.308	52.697	1.9753					33	12	4	0	0	0	0.5697	1	21227	21227		12.532	0.29089	1	8029700	+		9328	15232	4537	4559	11345	11345					0.015235039997151034
HFITQSAPDFK	11	Unmodified	_HFITQSAPDFK_					0	0	0		HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|17|1|sense	HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|17|1|sense	HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|17|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8887512087822	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.771	1	17.669	17.169	18.169	0.89794								0	0	0	0.63775	1	6977	6977		1.2148	0.10508	1				9329	7625	4538	4560	11346	11346					0.0072018456346540916
HFKFVIFLLF	10	Unmodified	_HFKFVIFLLF_					0	0	0		nc|ENSG00000170776|Q12802-5|AKAP13	nc|ENSG00000170776|Q12802-5|AKAP13	nc|ENSG00000170776|Q12802-5|AKAP13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	655.3834716677666	2	655.886627	1309.7587	3.9506	0.0025911	-4.2366	-0.0027787	-0.28604	-0.00018761	655.8838479751155	81.796	0.43524	83.466	83.14	83.575	1.67					20	13	2	0	0	0	0.1256	1	34335	34335		0.45834	0.057624	1	1200500			9330	7925	4539	4561	11347	11347					0.11621208609926725
HFKRFEKYDKW	11	Unmodified	_HFKRFEKYDKW_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.6113769412041	3	528.60877	1582.80448	0.98385	0.00052007	2.9713	0.0015707	3.9552	0.0020907	528.6111041799679	21.422	0.43636	21.422	21.252	21.688	0					38	13	4	0	0	0	0.92747	1	8901	8901		6.6235	6.1175	1	2567200			9331	918	4540	4562	11348	11348					0.036392020542052705
HFKRFEKYDKW	11	Unmodified	_HFKRFEKYDKW_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	528.60877	1582.80448	0.77699	0.00041072	2.4414	0.0012906	3.2184	0.0017013	528.6112424241325	20.877	0.27929	21.088	20.978	21.257	0.21024	-0.022862	-0.0013071	NaN	6.6235	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642790			9332	918	4540	4562							0.036392020542052705
HFKRFEKYDKW	11	Unmodified	_HFKRFEKYDKW_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	528.60877	1582.80448	0.81234	0.00042941	4.0298	0.0021302	4.8421	0.0025596	528.6110439515398	19.973	0.21941	21.032	20.921	21.14	1.0585	-0.0788	0.0012118	NaN	6.6235	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559690			9333	918	4540	4562							0.036392020542052705
HFKRFEKYDKW	11	Unmodified	_HFKRFEKYDKW_					0	0	0		nc|ENSG00000074755|O43149-3|ZZEF1;ENST00000574474.1_1_17:3979912-4046255:-|nuORF;ENSG00000074755|ENST00000381638|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	nc|ENSG00000074755|O43149-3|ZZEF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	528.60877	1582.80448	0.52832	0.00027928	3.7068	0.0019594	4.2351	0.0022387	528.9444029962077	19.377	0.14904	20.901	20.832	20.981	1.5237	-0.20968	0.00069959	NaN	6.6235	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270850			9334	918	4540	4562							0.036392020542052705
HFPRTVRWFHR	11	Unmodified	_HFPRTVRWFHR_					0	0	0		nc|ENSG00000011478|Q9NXS2-3|QPCTL;ENSG00000011478|ENST00000012049|QPCTL	nc|ENSG00000011478|Q9NXS2-3|QPCTL	nc|ENSG00000011478|Q9NXS2-3|QPCTL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1539.576586902142	1	1538.82399	1537.81672	2.4216	0.0037264	-0.99464	-0.0015306	1.4269	0.0021958	1538.8188068271195	32.265	0.15445	32.559	32.466	32.621	0.29431					6	4	2	0	0	0	0.14606	1	13508	13508		0.35063	0	1	447850			9335	573	4541	4563	11349	11349					0.06932283307924081
HFRDSCHS	8	Unmodified	_HFRDSCHS_					0	0	0		ENST00000469852.5_1_20:61463352-61467329:+|nuORF;ENST00000466192.5_1_20:61463352-61472081:+|nuORF	ENST00000469852.5_1_20:61463352-61467329:+|nuORF	ENST00000469852.5_1_20:61463352-61467329:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.1399413943291	3	330.139976	987.398098	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.714	1	11.475	10.975	11.975	0.76165								0	0	0	1.0178	1	4453	4453		1.8442	0	1				9336	6705	4542	4564	11350	11350					-0.09610543993505871
HFRGKSDNMS	10	Unmodified	_HFRGKSDNMS_					0	0	0			REV__ENST00000584580.1_1_17:45911366-45911959:+|nuORF	REV__ENST00000584580.1_1_17:45911366-45911959:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	589.7722045779228	2	589.772197	1177.52984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.045	1	26.297	25.797	26.797	0.25197								0	0	0	0.66031	1	10879	10879		3.9444	0	1		+		9337	14010	4543	4565	11351	11351					-0.05182358696401934
HFRKVAVPQ	9	Unmodified	_HFRKVAVPQ_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1081.627612292767	1	1081.62652	1080.61925	3.1293	0.0033847	-1.1356	-0.0012283	1.9936	0.0021564	1081.6249537136662	107.54	0.14882	107.69	107.62	107.77	0.15781					19	7	3	0	0	0	0.84963	1	46284	46284		0.6015	0	1	27982000	+		9338	10465	4544	4566	11352	11352					0.08216264045267963
HFRKVAVPQ	9	Unmodified	_HFRKVAVPQ_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1081.62652	1080.61925	1.31	0.001417	1.4525	0.0015711	2.7625	0.002988	1081.6291458541689	107.61	0.098969	107.61	107.55	107.65	0	-0.046857	0.0025961	NaN	0.6015	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6911800	+		9339	10465	4544	4566							0.08216264045267963
HFRKVAVPQ	9	Unmodified	_HFRKVAVPQ_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1081.62652	1080.61925	3.1293	0.0033847	-1.1356	-0.0012283	1.9936	0.0021564	1081.6249537136662	107.54	0.14882	107.69	107.62	107.77	0.15781	0.03364	-0.00020333	NaN	0.6015	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27982000	+		9340	10465	4544	4566							0.08216264045267963
HFSAMTLI	8	Unmodified	_HFSAMTLI_					0	0	0			REV__ENST00000500268.6_1_4:10456341-10456455:-|nuORF	REV__ENST00000500268.6_1_4:10456341-10456455:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	460.2391235232353	2	460.238938	918.463324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.127	1	34.405	33.905	34.905	1.2782								0	0	0	1.0178	1	13891	13891		2.5775	0	1		+		9341	13504	4545	4567	11353	11353					0.000830574796395922
HFSDILVQ	8	Unmodified	_HFSDILVQ_					0	0	0			REV__tr|A0A7D7A5U3|A0A7D7A5U3_9CLOTMethionyl-tRNAsynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07510PE=3SV=1	REV__tr|A0A7D7A5U3|A0A7D7A5U3_9CLOTMethionyl-tRNAsynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07510PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.1707336306572	3	320.17127	957.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.306	1	33.306	32.806	33.806	0								0	0	0	1.0178	1	13956	13956		0.45834	0	1		+		9342	15886	4546	4568	11354	11354					0.011534983804381227
HFSKRRFA	8	Unmodified	_HFSKRRFA_					0	0	0			REV__ENST00000377653.2_1_9:39174468-39266986:-|nuORF	REV__ENST00000377653.2_1_9:39174468-39266986:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.8297607302666	2	524.793592	1047.57263	3.0576	0.0016046	-2.7446	-0.0014403	0.31304	0.00016428	524.7918768888131	82.85	0.15845	84.062	83.92	84.079	1.2125					7	4	2	0	0	0	2.3239	1	34751	34751		2.8892	0.82947	1	430440	+		9343	9215	4547	4569	11355	11355					0.05074824214011642
HFSLEEDD	8	Unmodified	_HFSLEEDD_					0	0	0			REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	REV__nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9483215212822	2	496.203804	990.393055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.108	1	11.778	11.278	12.278	0.66934								0	0	0	1.0178	1	4617	4617		2.8892	0	1		+		9344	10421	4548	4570	11356	11356					-0.10252569375143139
HFTHKNILF	9	Unmodified	_HFTHKNILF_					0	0	0			REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	REV__ENST00000396403.8_1_19:53994954-53995710:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	386.1540405154228	3	386.213581	1155.61891	0.33233	0.00012835	-1.3128	-0.00050702	-0.98047	-0.00037867	386.21282670551983	23.543	0.36303	25.194	24.991	25.354	1.6511					15	11	2	0	0	0	0.11938	1	9851	9851		0.26902	0	1	953740	+		9345	12845	4549	4571	11357	11357					0.04732844325417318
HFTNIKPVE	9	Unmodified	_HFTNIKPVE_					0	0	0		nc|ENSG00000169554|O60315-2|ZEB2;ENSG00000169554|ENST00000627532|ZEB2	nc|ENSG00000169554|O60315-2|ZEB2	nc|ENSG00000169554|O60315-2|ZEB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	362.9873535037041	3	362.197708	1083.57129	1.1237	0.00040699	1.6445	0.00059563	2.7682	0.0010026	362.19807356772856	34.479	0.26049	34.776	34.63	34.891	0.29701					14	9	2	0	0	0	0.11923	1	14505	14505		2.086	0	1	966990			9346	4095	4550	4572	11358	11358					0.03285145334598383
HFTVILPLL	9	Unmodified	_HFTVILPLL_					0	0	0			REV__ENSG00000139826|ENST00000375898|ABHD13	REV__ENSG00000139826|ENST00000375898|ABHD13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8318359255791	2	526.828778	1051.643	3.9214	0.0020659	1.028	0.00054159	4.9495	0.0026075	526.8296603907302	96.259	0.15435	96.68	96.572	96.726	0.4212					7	4	2	0	0	0	0.66839	1	40495	40495		8.5933	0	1	4920200	+		9347	10110	4551	4573	11359	11359					0.11924684759082993
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1577026247978	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.054	1	37.054	36.554	37.554	0								0	0	0	1.0178	1	15533	15533		0.45834	0	1		+		9348	8299	4552	4574	11360	11360					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1568786501884	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.761	1	38.761	38.261	39.261	0								0	0	0	1.0178	1	16248	16248		0.45834	0	1		+		9349	8299	4552	4574	11361	11361					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1572753787041	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.134	1	39.134	38.634	39.634	0								0	0	0	1.0178	1	16402	16402		0.45834	0	1		+		9350	8299	4552	4574	11362	11362					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1580383181572	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.067	1	40.067	39.567	40.567	0								0	0	0	1.0178	1	16790	16790		0.45834	0	1		+		9351	8299	4552	4574	11363	11363					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1580993533134	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.163	1	40.163	39.663	40.663	0								0	0	0	1.0178	1	16829	16829		0.45834	0	1		+		9352	8299	4552	4574	11364	11364					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1582214236259	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.262	1	40.262	39.762	40.762	0								0	0	0	1.0178	1	16869	16869		0.45834	0	1		+		9353	8299	4552	4574	11365	11365					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1580688357353	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.392	1	40.392	39.892	40.892	0								0	0	0	1.0178	1	16921	16921		0.45834	0	1		+		9354	8299	4552	4574	11366	11366					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1580383181572	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.013	1	41.013	40.513	41.513	0								0	0	0	1.0178	1	17178	17178		0.45834	0	1		+		9355	8299	4552	4574	11367	11367					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1581603884697	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.269	1	41.269	40.769	41.769	0								0	0	0	1.0178	1	17281	17281		0.45834	0	1		+		9356	8299	4552	4574	11368	11368					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1583129763603	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.491	1	41.491	40.991	41.991	0								0	0	0	1.0178	1	17371	17371		0.45834	0	1		+		9357	8299	4552	4574	11369	11369					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1581909060478	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.586	1	41.586	41.086	42.086	0								0	0	0	1.0178	1	17410	17410		0.45834	0	1		+		9358	8299	4552	4574	11370	11370					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1582214236259	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.365	1	43.365	42.865	43.865	0								0	0	0	1.0178	1	18155	18155		0.45834	0	1		+		9359	8299	4552	4574	11371	11371					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1572448611259	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.911	1	39.195	38.695	39.695	1.284								0	0	0	1.0178	1	15912	15912		0.45834	0	1		+		9360	8299	4552	4574	11372	11372					-0.040089251747986054
HFVICGYF	8	Unmodified	_HFVICGYF_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|168|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1573364138603	3	329.158196	984.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.999	1	40.295	39.795	40.795	1.2961								0	0	0	1.0178	1	16362	16362		0.45834	0	1		+		9361	8299	4552	4574	11373	11373					-0.040089251747986054
HFWQNDYK	8	Unmodified	_HFWQNDYK_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2584716677666	2	569.259248	1136.50394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.399	1	29.678	29.178	30.178	1.2789								0	0	0	1.0178	1	11906	11906		5.7604	0.46354	1		+		9362	8531	4553	4575	11374	11374					-0.05884884876400065
HFWQNDYK	8	Unmodified	_HFWQNDYK_					0	0	0			REV__ENSG00000011028|ENST00000303375|MRC2	REV__ENSG00000011028|ENST00000303375|MRC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2578613162041	2	569.259248	1136.50394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.534	1	30.309	29.809	30.809	1.7754								0	0	0	1.0178	1	11948	11948		5.7604	0.52976	1		+		9363	8531	4553	4575	11375	11375					-0.05884884876400065
HFWRRRLQRLE	11	Unmodified	_HFWRRRLQRLE_					0	0	0			REV__ENSG00000179314|ENST00000317744|WSCD1	REV__ENSG00000179314|ENST00000317744|WSCD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1918212771416	3	532.970925	1595.89095	1.8667	0.0009949	3.0712	0.0016369	4.938	0.0026318	533.3068851046767	44.915	0.53789	45.241	44.927	45.465	0.32674					24	17	2	0	0	0	0.14606	1	18921	18921		0.094841	0.011491	1	1964800	+		9364	11274	4554	4576	11376	11376					0.11683626399440072
HFYLRRRRRV	10	Unmodified	_HFYLRRRRRV_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.9593383669853	3	486.96036	1457.85925	2.3899	0.0011638	-2.2315	-0.0010867	0.15831	7.7091E-05	486.9592425722195	88.983	1.9506	88.983	88.274	90.225	0					145	61	3	0	0	0	0.89803	1	37160	37160		0.15932	0	1	2426300			9365	1803	4555	4577	11377	11377					0.14863678436108785
HFYWWEFIRQW	11	Unmodified	_HFYWWEFIRQW_					0	0	0			REV__ENST00000470683.1_1_1:113153424-113161548:-|nuORF	REV__ENST00000470683.1_1_1:113153424-113161548:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.9362670779228	3	566.605249	1696.79392	1.3009	0.00073709	-4.2117	-0.0023864	-2.9108	-0.0016493	566.6030734039396	23.214	0.18329	24.428	24.29	24.473	1.2145					8	5	2	0	0	0	0.14606	1	9700	9700		0	0	1	417320	+		9366	13278	4556	4578	11378	11378					-0.026607806002175494
HGADGGAA	8	Unmodified	_HGADGGAA_					0	0	0			REV__nc|ENSG00000181577|Q8N319|LINC03040	REV__nc|ENSG00000181577|Q8N319|LINC03040	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1610290408134	2	328.143353	654.272152	-1.2616	-0.00041398	-1.6067	-0.00052722	-2.8682	-0.0009412	328.142687753198	88.684	0.50385	88.684	88.484	88.988	0					26	15	2	0	0	0	2.3239	1	37185	37185		0	0	1	800680	+		9367	14499	4557	4579	11379	11379					-0.06881307507296697
HGERCCCC	8	Unmodified	_HGERCCCC_					0	0	0			REV__nc|ENSG00000214900|Q8WXQ3|LINC01599	REV__nc|ENSG00000214900|Q8WXQ3|LINC01599	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.0964538455009	3	304.097737	909.271382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.786	1	41.786	41.286	42.286	0								0	0	0	1.0178	1	17490	17490		0	0	1		+		9368	14537	4558	4580	11380	11380					-0.1868825280615738
HGGAGEGG	8	Unmodified	_HGGAGEGG_					0	0	0		GJA8|p.S254Lfs*126|1|0.17|ENSG00000121634|chr1:147908713-147908714|-/C|frameshift_variant	GJA8|p.S254Lfs*126|1|0.17|ENSG00000121634|chr1:147908713-147908714|-/C|frameshift_variant	GJA8|p.S254Lfs*126|1|0.17|ENSG00000121634|chr1:147908713-147908714|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.6339904665947	2	321.135527	640.256502	-1.272	-0.00040849	0.79101	0.00025402	-0.48101	-0.00015447	321.13570353491417	13.772	0.34095	14.499	14.317	14.658	0.72639					14	10	2	0	0	0	2.3239	1	5733	5733		0	0	1	256460			9369	7589	4559	4581	11381	11381					-0.07801594024306269
HGGGAHPG	8	Unmodified	_HGGGAHPG_					0	0	0		ENST00000382141.4_1_13:24553874-24557904:+|nuORF	ENST00000382141.4_1_13:24553874-24557904:+|nuORF	ENST00000382141.4_1_13:24553874-24557904:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.1584960818291	2	345.159337	688.304121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6389	1	5.6389	5.1389	6.1389	0								0	0	0	1.0178	1	2316	2316		6.3541	0	1				9370	6236	4560	4582	11382	11382					-0.05249895033477969
HGGGGRSV	8	Unmodified	_HGGGGRSV_					0	0	0		ENST00000343638.9_1_17:42283996-42284245:-|nuORF	ENST00000343638.9_1_17:42283996-42284245:-|nuORF	ENST00000343638.9_1_17:42283996-42284245:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	726.3687011599541	1	726.364161	725.356885	2.7115	0.0019696	2.3747	0.0017249	5.0862	0.0036945	726.3658588406892	104.75	0.14804	104.81	104.72	104.87	0.056801					16	7	3	0	0	0	0.89176	1	44233	44233		0.79363	0.79363	1	96897000			9371	5950	4561	4583	11383	11383					-0.0167793697066827
HGGGGRSV	8	Unmodified	_HGGGGRSV_					0	0	0		ENST00000343638.9_1_17:42283996-42284245:-|nuORF	ENST00000343638.9_1_17:42283996-42284245:-|nuORF	ENST00000343638.9_1_17:42283996-42284245:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	726.364161	725.356885	2.6385	0.0019165	2.409	0.0017498	5.0475	0.0036663	726.365810007141	104.64	0.13056	104.82	104.75	104.88	0.1731	0.0042892	1.0521E-05	NaN	0.79363	17	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46915000			9372	5950	4561	4583							-0.0167793697066827
HGHRPSKLEET	11	Unmodified	_HGHRPSKLEET_					0	0	0		ENST00000245796.10_1_2:113960379-113960733:+|nuORF	ENST00000245796.10_1_2:113960379-113960733:+|nuORF	ENST00000245796.10_1_2:113960379-113960733:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8895446658134	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.437	1	60.765	60.265	61.265	0.32809								0	0	0	0.63775	1	25326	25326		0.50596	0.051438	1				9373	5576	4562	4584	11384	11384					0.014409171639272245
HGHSGFFP	8	Unmodified	_HGHSGFFP_					0	0	0		ENSG00000107295|ENST00000380607|SH3GL2	ENSG00000107295|ENST00000380607|SH3GL2	ENSG00000107295|ENST00000380607|SH3GL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2059509158134	2	443.203744	884.392936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.95	1	106	105.5	106.5	0.05455								0	0	0	1.0178	1	45042	45042		0.79363	0	1				9374	1598	4563	4585	11385	11385					-0.05388479793816714
HGIPPAFNK	9	Unmodified	_HGIPPAFNK_					0	0	0		tr|A0A553SNL7|A0A553SNL7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24680PE=4SV=1	tr|A0A553SNL7|A0A553SNL7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24680PE=4SV=1	tr|A0A553SNL7|A0A553SNL7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24680PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	327.0077087283134	3	327.51526	979.52395	-0.42754	-0.00014002	-1.2986	-0.0004253	-1.7261	-0.00056532	327.51526824395376	13.766	0.1574	14.594	14.485	14.643	0.82789					11	4	3	0	0	0	0.11819	1	5694	5694		1.0715	0	1	1026000			9375	16426	4564	4586	11386	11386					0.03336910854227426
HGKKKRRKR	9	Unmodified	_HGKKKRRKR_					0	0	0			REV__nc|ENSG00000185404|Q9H930-1|SP140L	REV__nc|ENSG00000185404|Q9H930-1|SP140L	MSMS	GG20161007_CRH_Patient100_W632_01	3	597.4005004763603	2	597.394339	1192.77413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.42	1	100.6	100.1	101.1	0.18047								0	0	0	0.42693	1	42258	42258		1.8442	0.6509	1		+		9376	11462	4565	4587	11387	11387					0.18544932970326045
HGKRKRKKK	9	Unmodified	_HGKRKRKKK_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3937255740166	2	583.391265	1164.76798	2.6404	0.0015404	1.7485	0.0010201	4.3889	0.0025604	583.3921933462117	107.5	0.24063	107.55	107.42	107.66	0.052452					46	11	5	0	0	0	0.85019	1	46022	46022		0.52476	0.12405	1	264770000			9377	722	4566	4588	11388	11388					0.19218414738816136
HGNCFCSG	8	Unmodified	_HGNCFCSG_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.6449767947197	2	412.644348	823.274143	2.504	0.0010333	-3.2316	-0.0013335	-0.72759	-0.00030024	412.6433227508923	78.711	0.37498	79.977	79.755	80.13	1.2668					22	11	3	0	0	0	0.89178	1	33044	33044		0.69038	0	1	726000	+		9378	8899	4567	4589	11389	11389					-0.14456338085335574
HGNCFCSG	8	Unmodified	_HGNCFCSG_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	412.644348	823.274143	1.9761	0.00081541	-1.7507	-0.0007224	0.22539	9.3006E-05	412.64304600309225	79.483	0.31863	79.784	79.59	79.909	0.30047	-0.03895	0.00081806	NaN	0.69038	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	476480	+		9379	8899	4567	4589							-0.14456338085335574
HGNCFCSG	8	Unmodified	_HGNCFCSG_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	412.644348	823.274143	2.504	0.0010333	-3.2316	-0.0013335	-0.72759	-0.00030024	412.6433227508923	78.711	0.37498	79.977	79.755	80.13	1.2668	0.15485	-0.00040413	NaN	0.69038	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	726000	+		9380	8899	4567	4589							-0.14456338085335574
HGNDCRESCCK	11	Unmodified	_HGNDCRESCCK_					0	0	0		ENST00000587994.5_1_18:47320687-47320783:-|nuORF	ENST00000587994.5_1_18:47320687-47320783:-|nuORF	ENST00000587994.5_1_18:47320687-47320783:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	626.2368041872978	2	626.236806	1250.45906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.174	1	32.468	31.968	32.968	0.29431								0	0	0	0.63775	1	13503	13503		3.2813	1.2216	1				9381	7462	4568	4590	11390	11390					-0.1561514306790741
HGNRKKLKKK	10	Unmodified	_HGNRKKLKKK_					0	0	0			REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	618.9070312380791	2	618.904205	1235.79386	2.6501	0.0016402	1.6317	0.0010099	4.2818	0.00265	618.9046523667612	107.4	0.1658	107.45	107.36	107.52	0.052452					18	7	3	0	0	0	0.89803	1	45922	45922		1.4819	0.28856	1	44619000	+		9382	13562	4569	4591	11391	11391					0.18539264190462745
HGNRKKLKKK	10	Unmodified	_HGNRKKLKKK_					0	0	0			REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	618.904205	1235.79386	1.5455	0.00095651	1.5163	0.00093841	3.0617	0.0018949	618.9047220054439	107.44	0.1989	107.44	107.35	107.55	0	-0.046805	0.00069075	NaN	1.4819	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34080000	+		9383	13562	4569	4591							0.18539264190462745
HGNRKKLKKK	10	Unmodified	_HGNRKKLKKK_					0	0	0			REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	REV__ENST00000509622.5_1_4:113565874-113567513:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	618.904205	1235.79386	2.6501	0.0016402	1.6317	0.0010099	4.2818	0.00265	618.9046523667612	107.4	0.1658	107.45	107.36	107.52	0.052452	-0.037039	0.0008337	NaN	1.4819	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44619000	+		9384	13562	4569	4591							0.18539264190462745
HGPCAVAA	8	Unmodified	_HGPCAVAA_					0	0	0		ENST00000510971.5_1_4:110351896-110354919:-|nuORF;ENST00000499359.2_1_4:110351922-110354928:-|nuORF	ENST00000510971.5_1_4:110351896-110354919:-|nuORF	ENST00000510971.5_1_4:110351896-110354919:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2531921267509	2	363.173598	724.332644	-1.9815	-0.00071962	-1.4139	-0.0005135	-3.3954	-0.0012331	363.1731708496587	15.012	1.2739	15.012	14.534	15.808	0					59	40	3	0	0	0	2.3239	1	6210	6210		0.79363	0	1	1642200			9385	6972	4570	4592	11392	11392					-0.040549134485672766
HGSCDGPC	8	Unmodified	_HGSCDGPC_					0	0	0			REV__ENSG00000120332|ENST00000239462|TNN	REV__ENSG00000120332|ENST00000239462|TNN	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1275207400322	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8245	1	4.4481	3.9481	4.9481	0.62362								0	0	0	1.0178	1	1578	1578		0.79363	0	1		+		9386	9570	4571	4593	11393	11393					-0.15364330839281592
HGSCDGPC	8	Unmodified	_HGSCDGPC_					0	0	0			REV__ENSG00000120332|ENST00000239462|TNN	REV__ENSG00000120332|ENST00000239462|TNN	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273376345634	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.123	1	4.7466	4.2466	5.2466	0.62362								0	0	0	1.0178	1	1701	1701		0.79363	0	1		+		9387	9570	4571	4593	11394	11394					-0.15364330839281592
HGYRLRNR	8	Unmodified	_HGYRLRNR_					0	0	0			REV__ENST00000597072.1_1_19:50812261-50812477:+|nuORF	REV__ENST00000597072.1_1_19:50812261-50812477:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	357.8676330447197	3	357.868808	1070.58459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.998	1	62.327	61.827	62.827	0.32974								0	0	0	1.0178	1	25976	25976		0.45834	0.057624	1		+		9388	14096	4572	4594	11395	11395					0.05212440957166109
HHGCTMGGSKK	11	Unmodified	_HHGCTMGGSKK_					0	0	0		ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5100280642509	3	381.511304	1141.51208	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3277	1	8.4041	7.9041	8.9041	0.07632								0	0	0	0.63773	1	3448	3448		8.7518	0.30748	1				9389	6580	4573	4595	11396	11396					-0.05301397222910964
HHGCTMGGSKK	11	Unmodified	_HHGCTMGGSKK_					0	0	0		ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5106078982353	3	381.511304	1141.51208	-1.1538	-0.00044018	-1.6944	-0.00064643	-2.8482	-0.0010866	381.5109525285608	3.8283	2.3664	4.4519	2.7819	5.1483	0.62362					214	148	2	0	0	0	0.83846	1	1136	1136		13.519	2.7192	1	966510			9390	6580	4573	4595	11397	11397					-0.05301397222910964
HHGCTMGGSKK	11	Unmodified	_HHGCTMGGSKK_					0	0	0		ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	ENST00000445477.1_1_22:31955550-31955922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5099059939384	3	381.511304	1141.51208	0.091589	3.4942E-05	-1.3332	-0.00050862	-1.2416	-0.00047368	381.51128335645575	18.079	1.6887	19.527	19.016	20.705	1.448					88	55	2	0	0	0	0.88194	1	7430	7430		10.899	2.4547	1	793540			9391	6580	4573	4595	11398	11398					-0.05301397222910964
HHGDNASR	8	Unmodified	_HHGDNASR_					0	0	0		nc|ENSG00000197579|Q9NS56-2|TOPORS;ENSG00000197579|ENST00000360538|TOPORS	nc|ENSG00000197579|Q9NS56-2|TOPORS	nc|ENSG00000197579|Q9NS56-2|TOPORS	MSMS	GG20161007_CRH_Patient100_A02_01	1	447.2011901736259	2	447.202264	892.389976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.6	1	102.6	102.1	103.1	0								0	0	0	1.0178	1	43000	43000		2.0598	1.2661	1				9392	5015	4574	4596	11399	11399					-0.0605235491862004
HHHHNNHLRT	10	Unmodified	_HHHHNNHLRT_					0	0	0		ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8820983767509	3	434.881887	1301.62383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.28	1	110.28	109.78	110.78	0								0	0	0	0.66264	1	47743	47743		0	0	1				9393	6412	4575	4597	11400	11400					-0.0149145875927843
HHHHNNHLRT	10	Unmodified	_HHHHNNHLRT_					0	0	0		ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8821288943291	3	434.881887	1301.62383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.75	1	110.75	110.25	111.25	0								0	0	0	0.66264	1	47925	47925		0	0	1				9394	6412	4575	4597	11401	11401					-0.0149145875927843
HHHHNNHLRT	10	Unmodified	_HHHHNNHLRT_					0	0	0		ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8824035525322	3	434.881887	1301.62383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4026	1	9.4805	8.9805	9.9805	0.077971								0	0	0	0.66254	1	3896	3896		0.15932	0	1				9395	6412	4575	4597	11402	11402					-0.0149145875927843
HHHHNNHLRT	10	Unmodified	_HHHHNNHLRT_					0	0	0		ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	ENST00000417098.5_1_2:200322217-200322325:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8818847537041	3	434.881887	1301.62383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.96	1	111.11	110.61	111.61	0.15038								0	0	0	0.66264	1	48102	48102		0	0	1				9396	6412	4575	4597	11403	11403					-0.0149145875927843
HHIVIILKC	9	Unmodified	_HHIVIILKC_					0	0	0			REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|84|3|sense	REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|84|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3265869021416	2	538.325879	1074.63721	3.0129	0.0016219	1.357	0.00073053	4.3699	0.0023524	538.3256708523464	84.956	0.57192	86.553	86.25	86.822	1.5962					47	21	3	0	0	0	0.84963	1	35729	35729		0.6015	0	1	53984000	+		9397	14264	4576	4598	11404	11404					0.10287262975771228
HHIWLIFVFLV	11	Unmodified	_HHIWLIFVFLV_					0	0	0		ENST00000511697.1_1_17:46919069-46919841:+|nuORF	ENST00000511697.1_1_17:46919069-46919841:+|nuORF	ENST00000511697.1_1_17:46919069-46919841:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	475.9625427126884	3	475.279814	1422.81761	2.4809	0.0011791	-2.7622	-0.0013128	-0.2813	-0.00013369	475.27858595076043	51.901	0.77156	52.226	51.943	52.715	0.32554					58	24	3	0	0	0	0.14606	1	21919	21919		5.4027	2.5594	1	2959700			9398	7035	4577	4599	11405	11405					0.1231168490426171
HHPVRRLA	8	Unmodified	_HHPVRRLA_					0	0	0		ENST00000369980.7_2_X:153276977-153277313:-|nuORF	ENST00000369980.7_2_X:153276977-153277313:-|nuORF	ENST00000369980.7_2_X:153276977-153277313:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2966186404228	2	493.293759	984.572966	2.4273	0.0011974	1.9355	0.00095478	4.3629	0.0021522	493.2949860523372	78.462	0.88089	78.771	78.227	79.108	0.30932					58	27	3	0	0	0	0.89152	1	32808	32808		2.5775	1.8871	1	1243200			9399	6102	4578	4600	11406	11406					0.08006243933846235
HHRKEHYL	8	Unmodified	_HHRKEHYL_					0	0	0		ENSG00000114554|ENST00000393409|PLXNA1;PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant;PLXNA3|p.L1776Rfs*78|1|0.25|ENSG00000130827|chrX:154471271-154471275|CTGCT/-|frameshift_variant;ENSG00000130827|ENST00000369682|PLXNA3	ENSG00000114554|ENST00000393409|PLXNA1;PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2933837771416	2	560.293956	1118.57336	3.2375	0.0018139	-2.1881	-0.001226	1.0494	0.00058797	560.2927324910361	60.283	0.31335	62.248	62.073	62.387	1.9653					20	9	3	0	0	0	0.71791	1	25302	25302		28.487	0.85804	1	3104600			9400	1870;2466	4579	4601	11407	11407					0.01881618863035328
HHVLHDQNVEK	11	Unmodified	_HHVLHDQNVEK_					0	0	0		OGDH|p.D696E|1|0.05|ENSG00000105953|chr7:44697406-44697406|C/G|missense_variant	OGDH|p.D696E|1|0.05|ENSG00000105953|chr7:44697406-44697406|C/G|missense_variant	OGDH|p.D696E|1|0.05|ENSG00000105953|chr7:44697406-44697406|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.6761047244072	4	339.675826	1354.6742	-2.8449	-0.00096635	3.5215	0.0011962	0.67654	0.0002298	339.6769799214411	11.436	0.52316	11.436	11.325	11.849	0					33	16	3	0	0	0	1.0084	1	4770	4770		1.3296	0	1	1863400			9401	8043	4580	4602	11408	11408					0.011046060552189374
HICHVHPGFHL	11	Unmodified	_HICHVHPGFHL_					0	0	0		ENST00000591278.5_1_19:9266676-9268567:+|nuORF	ENST00000591278.5_1_19:9266676-9268567:+|nuORF	ENST00000591278.5_1_19:9266676-9268567:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9039794802666	3	432.88547	1295.63458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.341	1	43.681	43.181	44.181	1.3399								0	0	0	0.6377	1	17750	17750		12.175	4.6977	1				9402	7485	4581	4603	11409	11409					-0.0014119242919150565
HIEFRNHRET	10	Unmodified	_HIEFRNHRET_					0	0	0		tr|A0A553SIC9|A0A553SIC9_NIACIRNAhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14640PE=4SV=1	tr|A0A553SIC9|A0A553SIC9_NIACIRNAhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14640PE=4SV=1	tr|A0A553SIC9|A0A553SIC9_NIACIRNAhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	669.8366577029228	2	669.836717	1337.65888	0.70429	0.00047176	-2.0703	-0.0013868	-1.366	-0.00091501	669.8354089366368	11.833	0.12344	11.833	11.757	11.88	0					5	3	2	0	0	0	0.63205	1	4904	4904		21.537	1.1224	1	1993200			9403	16188	4582	4604	11410	11410					0.003557392580432861
HIEHVVYKSVL	11	Unmodified	_HIEHVVYKSVL_					0	0	0		tr|A0A7D6VNS5|A0A7D6VNS5_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20185PE=4SV=1	tr|A0A7D6VNS5|A0A7D6VNS5_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20185PE=4SV=1	tr|A0A7D6VNS5|A0A7D6VNS5_9CLOTPRDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20185PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	662.9316284060478	2	662.374612	1322.73467	3.0915	0.0020477	-2.9498	-0.0019539	0.14171	9.3867E-05	662.3720421231754	107.3	0.13069	107.46	107.39	107.52	0.15796					17	6	4	0	0	0	0.14606	1	46037	46037		0.35063	0	1	33042000			9404	16743	4583	4605	11411	11411					0.08621323385614232
HIELYEGNE	9	Unmodified	_HIELYEGNE_					0	0	0		tr|A0A7D6VT10|A0A7D6VT10_9CLOTSugartransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18790PE=3SV=1	tr|A0A7D6VT10|A0A7D6VT10_9CLOTSugartransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18790PE=3SV=1	tr|A0A7D6VT10|A0A7D6VT10_9CLOTSugartransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18790PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	551.7935058474541	2	552.253828	1102.4931	2.8556	0.001577	2.8688	0.0015843	5.7244	0.0031613	552.2563768192642	74.408	0.31349	76.205	75.929	76.242	1.7962					12	9	2	0	0	0	0.097511	1	31147	31147		16.942	3.0362	1	1104600			9405	16895	4584	4606	11412	11412					-0.05404332041325688
HIFKLEQV	8	Unmodified	_HIFKLEQV_					0	0	0		ENST00000589459.5_1_17:66423364-66453609:-|nuORF;nc|ENSG00000070540|Q5MNZ9-2|WIPI1;ENSG00000070540|ENST00000262139|WIPI1	ENST00000589459.5_1_17:66423364-66453609:-|nuORF	ENST00000589459.5_1_17:66423364-66453609:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	507.2576476931572	2	507.292559	1012.57057	1.9746	0.0010017	-1.2801	-0.00064938	0.69448	0.0003523	507.29287213857526	78.964	0.147	78.964	78.877	79.024	0					5	4	2	0	0	0	2.3239	1	32861	32861		0.6015	0.076735	1	249290			9406	855	4585	4607	11413	11413					0.06478350685517853
HIGFGIVLCL	10	Unmodified	_HIGFGIVLCL_					0	0	0		ENSG00000071203|ENST00000016913|MS4A12	ENSG00000071203|ENST00000016913|MS4A12	ENSG00000071203|ENST00000016913|MS4A12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3090087771416	2	536.304613	1070.59467	2.1785	0.0011683	-1.7111	-0.00091768	0.46736	0.00025065	536.3041551906354	43.036	1.9062	44.957	44.694	46.6	1.9211					100	61	3	0	0	0	0.79742	1	18054	18054		12.532	1.7076	1	3738100			9407	866	4586	4608	11414	11414					0.0621986784751698
HIIENIVAV	9	Unmodified	_HIIENIVAV_					0	0	0		ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENSG00000171490|ENST00000571133|RSL1D1	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2990905642509	2	504.297842	1006.58113	2.0305	0.001024	0.34303	0.00017299	2.3735	0.001197	504.29805551399113	46.821	0.42542	46.821	46.628	47.053	0					36	13	4	0	0	0	0.029093	3	19571	19530;19571;19626		88.904	21.56	1	6966300			9408	4192	4587	4609	11415;11416;11417	11416					0.07810333339944009
HIIENIVAV	9	Unmodified	_HIIENIVAV_					0	0	0		ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENSG00000171490|ENST00000571133|RSL1D1	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2993041872978	2	504.297842	1006.58113	2.1779	0.0010983	0.17201	8.6747E-05	2.3499	0.001185	504.29798281736504	46.277	0.43015	46.606	46.416	46.846	0.32899					39	14	4	0	0	0	0.037761	3	19423	19380;19423;19470		78.149	20.678	1	5776200			9409	4192	4587	4609	11418;11419;11420	11419					0.07810333339944009
HIIENIVAV	9	Unmodified	_HIIENIVAV_					0	0	0		ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENSG00000171490|ENST00000571133|RSL1D1	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2989684939384	2	504.297842	1006.58113	2.8785	0.0014516	-0.37939	-0.00019132	2.4991	0.0012603	504.29767783618485	44.8	0.50221	46.165	45.962	46.464	1.3653					40	15	3	0	0	0	0.018723	3	18780	18731;18780;18831		100.37	22.387	1	24230000			9410	4192	4587	4609	11421;11422;11423	11422					0.07810333339944009
HIIENIVAV	9	Unmodified	_HIIENIVAV_					0	0	0		ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENSG00000171490|ENST00000571133|RSL1D1	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2991821169853	2	504.297842	1006.58113	2.1247	0.0010715	0.26047	0.00013135	2.3852	0.0012028	504.29805286622695	44.218	0.60325	46.162	45.957	46.56	1.9438					53	18	4	0	0	0	0.029093	4	18552	18505;18552;18591;18632		88.904	21.56	1	21843000			9411	4192	4587	4609	11424;11425;11426;11427	11425					0.07810333339944009
HIIENIVAV	9	Unmodified	_HIIENIVAV_					0	0	0		ENST00000574823.5_1_16:11935494-11935832:-|nuORF;nc|ENSG00000171490|O76021-2|RSL1D1;ENST00000396503.7_1_16:11931646-11945380:-|nuORF;ENSG00000171490|ENST00000571133|RSL1D1	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	ENST00000574823.5_1_16:11935494-11935832:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	504.297842	1006.58113	1.7927	0.00090406	-1.1186	-0.00056412	0.67408	0.00033994	504.29816555864744	44.814	0.35216	46.773	46.576	46.928	1.9596	0.03994	-0.001362	NaN	88.904	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492150			9412	4192	4587	4609							0.07810333339944009
HIIGGVIAV	9	Unmodified	_HIIGGVIAV_					0	0	0		ENST00000550528.5_1_12:58133675-58140075:+|nuORF;ENST00000546993.5_1_12:58138937-58140584:+|nuORF;ENSG00000135452|ENST00000257910|TSPAN31	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	ENST00000550528.5_1_12:58133675-58140075:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.7785217165947	2	439.776545	877.538538	2.6273	0.0011554	0.71271	0.00031343	3.34	0.0014689	439.7765948602291	45.199	0.19556	46.565	46.464	46.66	1.3653					8	5	2	0	0	0	0.16975	1	18931	18931		36.466	15.595	1	501610			9413	2668	4588	4610	11428	11428					0.09486983002375382
HIIRSKTLLSK	11	Unmodified	_HIIRSKTLLSK_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|38|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|38|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|38|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.7077514529228	4	324.709403	1294.8085	-1.9363	-0.00062875	-1.3877	-0.0004506	-3.324	-0.0010793	324.70862342540585	45.28	0.75286	45.28	44.872	45.625	0					44	23	2	0	0	0	1.0357	1	18896	18896		1.4551	0.44154	1	2491500			9414	7729	4589	4611	11429	11429					0.17289291547922403
HIISFTVKY	9	Unmodified	_HIISFTVKY_					0	0	0		ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2	ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3142578005791	2	554.313492	1106.61243	1.9343	0.0010722	-0.84614	-0.00046902	1.0881	0.00060317	554.3129989170412	38.905	0.18842	40.201	40.069	40.258	1.2961					9	5	3	0	0	0	0.10294	1	16325	16325		48.346	27.931	1	648890			9415	7306;4152	4590	4612	11430	11430					0.06338906374048747
HIITAYHLPQ	10	Unmodified	_HIITAYHLPQ_					0	0	0			REV__ENSG00000204657|ENST00000641840|OR2H2	REV__ENSG00000204657|ENST00000641840|OR2H2	MSMS	GG20161007_CRH_Patient100_A02_01	1	596.8273803591728	2	596.827298	1191.64004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.866	1	96.866	96.366	97.366	0								0	0	0	0.65773	1	40495	40495		7.2892	1.0834	1		+		9416	11796	4591	4613	11431	11431					0.05188809634273639
HIKKHKILTSK	11	Unmodified	_HIKKHKILTSK_					0	0	0			REV__ENST00000344302.8_1_X:46332625-46332913:+|nuORF	REV__ENST00000344302.8_1_X:46332625-46332913:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1211120486259	3	444.95399	1331.84014	2.1433	0.00095368	-3.8249	-0.0017019	-1.6816	-0.00074823	444.9523096622527	89.13	0.28641	89.13	89.019	89.306	0					11	8	2	0	0	0	0.14606	1	37262	37262		0.08335	0.08335	1	488000	+		9417	12517	4592	4614	11432	11432					0.18749284301884472
HIKRKILIA	9	Unmodified	_HIKRKILIA_					0	0	0		ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3744384646416	2	546.374218	1090.73388	0.94387	0.0005157	0.62083	0.00033921	1.5647	0.00085491	546.3746802302489	109.41	0.33636	109.41	109.25	109.59	0					35	14	3	0	0	0	0.85403	1	47344	47344		0	0	1	13634000			9418	6004	4593	4615	11433	11433					0.19214573527256107
HIKRKILIA	9	Unmodified	_HIKRKILIA_					0	0	0		ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	ENST00000358015.7_1_9:110093006-110093297:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3776122927666	2	546.374218	1090.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.68	1	105.84	105.34	106.34	0.15859								0	0	0	0.42693	1	45064	45064		0.52476	0	1				9419	6004	4593	4615	11434	11434					0.19214573527256107
HILDFSPSL	9	Unmodified	_HILDFSPSL_					0	0	0		ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.7758666872978	2	514.7742	1027.53385	2.3098	0.001189	-1.5919	-0.00081947	0.71794	0.00036958	514.7738779028643	59.952	0.29783	59.952	59.827	60.124	0					15	9	2	0	0	0	0.09539	1	24995	24995		50.855	22.368	1	1348400			9420	2239	4594	4616	11435	11435					0.021180540689556437
HILDFSPSL	9	Unmodified	_HILDFSPSL_					0	0	0		ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.7747680544853	2	514.7742	1027.53385	2.5447	0.00131	-0.74837	-0.00038524	1.7963	0.00092471	514.774344684531	59.36	0.39031	59.685	59.604	59.995	0.32554					20	12	2	0	0	0	0.03795	2	24866	24866;24913		77.984	29.638	1	1871000			9421	2239	4594	4616	11436;11437	11436					0.021180540689556437
HILRQRVKS	9	Unmodified	_HILRQRVKS_					0	0	0			REV__ENSG00000283297|ENST00000637658|TEX52	REV__ENSG00000283297|ENST00000637658|TEX52	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8550903201103	2	568.854181	1135.69381	2.2108	0.0012576	-0.22364	-0.00012722	1.9872	0.0011304	568.8540865699008	88.409	0.8358	88.409	88.119	88.955	0					87	26	5	0	0	0	0.8462	1	37000	37000		2.0598	1.4583	1	105930000	+		9422	12031	4595	4617	11438	11438					0.1313902685665198
HILTRKRIRYR	11	Unmodified	_HILTRKRIRYR_					0	0	0		JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant;JAK2|p.Y913Vfs*12|1|0.15|ENSG00000096968|chr9:5089834-5089835|-/A|frameshift_variant;ENSG00000096968|ENST00000381652|JAK2	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	756.4731933474541	2	756.473318	1510.93208	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.94	1	103.94	103.44	104.44	0								0	0	0	0.63775	1	43761	43761		0.35063	0	1				9423	1197	4596	4618	11439	11439					0.19705387438921207
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	335.1754943728447	4	335.175658	1336.67353	-3.0167	-0.0010111	2.248	0.00075348	-0.7687	-0.00025765	335.1763344480327	11.182	0.64899	11.182	10.802	11.451	0					52	20	4	0	0	0	0.1286	2	4610	4610;4649		50.648	41.896	1	3718400		+	9424	335	4597	4619	11440;11441	11440					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	446.5654785037041	3	446.565119	1336.67353	0.24068	0.00010748	0.020487	9.1489E-06	0.26117	0.00011663	446.56655938472124	11.59	1.0196	11.59	11.295	12.314	0					73	32	6	0	0	0	0.025429	3	4755	4755;4803;4842		95.507	77.644	1	509280000		+	9425	335	4597	4619	11442;11443;11444	11442					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	669.3439819216728	2	669.34404	1336.67353	0.69502	0.00046521	-1.189	-0.00079583	-0.49395	-0.00033063	669.3431726978451	11.59	0.27483	11.59	11.451	11.726	0					20	8	4	0	0	0	0.040978	1	4784	4784		79.86	53.592	1	8883900		+	9426	335	4597	4619	11445	11445					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	335.1743347048759	4	335.175658	1336.67353	-0.4139	-0.00013873	-1.2549	-0.00042061	-1.6688	-0.00055934	335.1750684946007	10.203	0.83449	10.281	10.13	10.964	0.077971					35	26	3	0	0	0	0.95935	1	4218	4218		6.2344	2.6473	1	1036600		+	9427	335	4597	4619	11446	11446					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	446.5656310915947	3	446.565119	1336.67353	0.64326	0.00028726	-0.18645	-8.3264E-05	0.4568	0.00020399	446.5655311481171	11.606	0.95291	11.688	11.19	12.143	0.082325					75	30	4	0	0	0	0.034049	3	4793	4793;4843;4883		75.986	60.248	1	119480000		+	9428	335	4597	4619	11447;11448;11449	11447					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	669.3450195193291	2	669.34404	1336.67353	0.057744	3.8651E-05	0.48055	0.00032165	0.5383	0.0003603	669.3439509609194	11.606	0.18579	11.688	11.612	11.798	0.082325					12	5	3	0	0	0	0.32054	1	4827	4827		42.068	26.819	1	1566700		+	9429	335	4597	4619	11450	11450					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	446.5651122927666	3	446.565119	1336.67353	-0.16522	-7.3781E-05	0.059873	2.6737E-05	-0.10534	-4.7043E-05	446.5652638245472	11.081	1.4809	11.75	10.88	12.36	0.66934					104	48	4	0	0	0	0.027803	3	4607	4569;4607;4646		83.455	67.318	1	39160000		+	9430	335	4597	4619	11451;11452;11453	11452					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	446.5651428103447	3	446.565119	1336.67353	0.19341	8.6372E-05	0.044028	1.9661E-05	0.23744	0.00010603	446.5652352922416	10.881	1.1283	11.642	11.001	12.13	0.76165					105	41	4	0	0	0	0.026527	2	4507	4507;4554		91.233	72.089	1	23481000		+	9431	335	4597	4619	11454;11455	11454					0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	669.34404	1336.67353	-0.59819	-0.0004004	0.72034	0.00048216	0.12215	8.176E-05	669.3446018111852	11.081	0.18965	11.75	11.639	11.829	0.66934	0.073843	0.0015087	NaN	79.86	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	361310		+	9432	335	4597	4619							0.018657666155149855
HIQKEDVPSER	11	Unmodified	_HIQKEDVPSER_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	335.175658	1336.67353	-1.6352	-0.00054807	-0.49403	-0.00016559	-2.1292	-0.00071365	335.17539166937473	9.8194	0.58419	10.47	10.307	10.891	0.65058	0.094584	0.00057989	NaN	6.2344	25	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	799210		+	9433	335	4597	4619							0.018657666155149855
HIRHLREKLEK	11	Unmodified	_HIRHLREKLEK_					0	0	0		tr|A0A7D6VMR5|A0A7D6VMR5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12830PE=4SV=1	tr|A0A7D6VMR5|A0A7D6VMR5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12830PE=4SV=1	tr|A0A7D6VMR5|A0A7D6VMR5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	729.9367553591728	2	729.936234	1457.85791	2.5876	0.0018888	-1.5511	-0.0011322	1.0365	0.0007566	729.9350352674447	89.038	1.2216	89.038	88.304	89.526	0					87	38	3	0	0	0	1.0402	1	37097	37097		0	0	1	1478000			9434	16717	4598	4620	11456	11456					0.14729999556743678
HIRYMNFDQK	10	Unmodified	_HIRYMNFDQK_					0	0	0			REV__ENST00000178640.9_1_15:67938636-67950909:+|nuORF	REV__ENST00000178640.9_1_15:67938636-67950909:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	451.1763793826103	3	451.22404	1350.65029	0.68307	0.00030822	2.7635	0.001247	3.4466	0.0015552	451.22593287763283	11.483	0.27809	11.565	11.394	11.672	0.082325					11	8	2	0	0	0	0.12547	1	4771	4771		3.8763	1.1411	1	325050	+		9435	12048	4599	4621	11457	11457					-0.011009507028120424
HITRKKLK	8	Unmodified	_HITRKKLK_					0	0	0		ENSG00000172020|ENST00000305124|GAP43;nc|ENSG00000172020|P17677-2|GAP43	ENSG00000172020|ENST00000305124|GAP43	ENSG00000172020|ENST00000305124|GAP43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.1760436892509	3	341.897704	1022.67128	0.51708	0.00017679	1.808	0.00061814	2.325	0.00079493	341.89861569403917	27.422	0.27725	27.693	27.494	27.771	0.27119					11	8	2	0	0	0	2.3239	1	11459	11459		0.40072	0	1	242230			9436	4225	4600	4622	11458	11458					0.16085427459040602
HIVHPQAAY	9	Unmodified	_HIVHPQAAY_					0	0	0			REV__ENSG00000054965|ENST00000356467|FAM168A	REV__ENSG00000054965|ENST00000356467|FAM168A	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.8508178591728	3	345.850531	1034.52976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.02	1	14.125	13.625	14.625	0.10502								0	0	0	0.22015	1	5817	5817		17.113	0	1		+		9437	8634	4601	4623	11459	11459					0.013880093659054182
HIVHPQAAY	9	Unmodified	_HIVHPQAAY_					0	0	0			REV__ENSG00000054965|ENST00000356467|FAM168A	REV__ENSG00000054965|ENST00000356467|FAM168A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.8506347537041	3	345.850531	1034.52976	-1.2971	-0.00044862	1.6833	0.00058218	0.38618	0.00013356	345.8511749255907	13.561	0.96114	14.288	13.82	14.781	0.72639					48	30	2	0	0	0	0.54523	2	5629	5629;5685		13.042	1.4562	1	1011900	+		9438	8634	4601	4623	11460;11461	11460					0.013880093659054182
HIYYITGETK	10	Unmodified	_HIYYITGETK_					0	0	0		ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000205955|Q58FG0|HSP90AA5P;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENST00000530115.1_1_11:27910903-27911533:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8168212771416	2	612.816596	1223.61864	0.30927	0.00018952	1.3366	0.00081909	1.6459	0.0010086	612.817390587373	18.963	0.21612	20.487	20.349	20.565	1.5237					10	6	2	0	0	0	0.2264	1	7890	7890		45.74	27.367	1	570550			9439	1010;7159	4602	4624	11462	11462					0.015773798148757123
HKDAKRKMK	9	Unmodified	_HKDAKRKMK_					0	0	0		nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;ENSG00000198000|ENST00000442668|NOL8;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;ENST00000463593.6_1_9:95060120-95060712:-|nuORF	nc|ENSG00000198000|Q76FK4-2|NOL8;ENST00000463593.6_1_9:95060120-95060712:-|nuORF	nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.2239562869072	3	381.225603	1140.65498	0.4199	0.00016008	-2.7249	-0.0010388	-2.305	-0.00087874	381.22460927415614	88.398	0.36269	88.398	88.211	88.574	0					21	11	3	0	0	0	0.11878	1	36917	36917		1.9064	1.6995	1	1305000			9440	5035;6686	4603	4625	11463	11463					0.09027978230619738
HKDAKRKMK	9	Unmodified	_HKDAKRKMK_					0	0	0		nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;ENSG00000198000|ENST00000442668|NOL8;ENST00000544867.5_1_9:95060120-95062368:-|nuORF;ENST00000463593.6_1_9:95060120-95060712:-|nuORF	nc|ENSG00000198000|Q76FK4-2|NOL8;ENST00000463593.6_1_9:95060120-95060712:-|nuORF	nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	381.225603	1140.65498	2.5267	0.00096323	-3.5261	-0.0013442	-0.99941	-0.000381	381.22492881367594	88.227	0.33894	88.461	88.322	88.661	0.23471	0.031858	-0.00067087	NaN	1.9064	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1622800			9441	5035;6686	4603	4625							0.09027978230619738
HKDKIKKNQ	9	Unmodified	_HKDKIKKNQ_					0	0	0			REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2284423708916	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.869	1	77.869	77.369	78.369	0								0	0	0	0.42693	1	32418	32418		0.86438	0.087843	1		+		9442	8817	4604	4626	11464	11464					0.09851614382819207
HKDKIKKNQ	9	Unmodified	_HKDKIKKNQ_					0	0	0			REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2288696169853	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.956	1	81.247	80.747	81.747	0.29056								0	0	0	0.42693	1	33843	33843		0.96228	0	1		+		9443	8817	4604	4626	11465	11465					0.09851614382819207
HKDKIKKNQ	9	Unmodified	_HKDKIKKNQ_					0	0	0			REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	REV__ZNF510|p.M172Nfs*17|1|0.24|ENSG00000081386|chr9:96760315-96760316|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2291137576103	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.274	1	81.564	81.064	82.064	0.29056								0	0	0	0.42693	1	33977	33977		0.96228	0	1		+		9444	8817	4604	4626	11466	11466					0.09851614382819207
HKHFYWWEFIR	11	Unmodified	_HKHFYWWEFIR_					0	0	0			REV__ENST00000470683.1_1_1:113153424-113161548:-|nuORF	REV__ENST00000470683.1_1_1:113153424-113161548:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2179443240166	3	550.277244	1647.8099	0.36723	0.00020208	0.11984	6.5945E-05	0.48707	0.00026802	550.2768238279288	32.446	0.23997	33.724	33.584	33.824	1.2782					10	7	2	0	0	0	0.14606	1	13564	13564		0.08335	0	1	861520	+		9445	13278	4605	4627	11467	11467					0.011909256366834597
HKHKHKHK	8	Unmodified	_HKHKHKHK_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;ENSG00000112739|ENST00000337659|PRPF4B;ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1;ENSG00000064313|ENST00000378164|TAF2;ENSG00000112739|ENST00000337659|PRPF4B;ENSG00000152217|ENST00000649279|SETBP1;REV__ENSG00000064313|ENST00000378164|TAF2;REV__ENSG00000112739|ENST00000337659|PRPF4B	ENSG00000064313|ENST00000378164|TAF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.2016784548759	3	360.549298	1078.62606	-2.21	-0.00079681	1.7332	0.00062491	-0.47679	-0.00017191	360.54985527759175	11.681	0.36775	11.681	11.513	11.88	0					19	11	2	0	0	0	2.3239	1	4780	4780		1.3295	0.36726	1	3080200			9446	770;10416;1794;3314;8660;9367	4606	4628	11468	11468					0.08989621716500551
HKKPKKRKEKR	11	Unmodified	_HKKPKKRKEKR_					0	0	0			REV__ENST00000587110.1_1_17:41796950-41797316:-|nuORF	REV__ENST00000587110.1_1_17:41796950-41797316:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	366.7420226931572	4	366.491485	1461.93683	-0.78159	-0.00028645	-0.62875	-0.00023043	-1.4103	-0.00051688	366.4912854200966	40.843	0.59569	40.843	40.58	41.176	0					29	18	2	0	0	0	1.0402	1	17132	17132		0.094841	0	1	1009700	+		9447	14035	4607	4629	11469	11469					0.2243427158164195
HKKVLKLAKG	10	Unmodified	_HKKVLKLAKG_					0	0	0		tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3793823122978	2	561.3795	1120.74445	0.77778	0.00043663	-0.31612	-0.00017747	0.46165	0.00025916	561.3790275700298	106.09	0.12723	106.09	106.01	106.13	0					14	5	3	0	0	0	0.88022	1	45173	45173		3.5965	0	1	79472000			9448	17054	4608	4630	11470	11470					0.1889055618164548
HKKVLKLAKG	10	Unmodified	_HKKVLKLAKG_					0	0	0		tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	tr|A0A7D6ZES3|A0A7D6ZES3_9CLOTLargeribosomalsubunitproteinbL20OS=ClostridiumintestinaleOX=36845GN=rplTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3790771365166	2	561.3795	1120.74445	3.2341	0.0018156	-3.1117	-0.0017468	0.1224	6.8714E-05	561.3775781716377	105.99	0.15226	106.15	106.07	106.22	0.16174					30	7	5	0	0	0	0.88022	1	45193	45193		3.5965	1.5367	1	549750000			9449	17054	4608	4630	11471	11471					0.1889055618164548
HKLKPLRRQ	9	Unmodified	_HKLKPLRRQ_					0	0	0			REV__nc|ENSG00000114631|Q9NZ53-2|PODXL2	REV__nc|ENSG00000114631|Q9NZ53-2|PODXL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3801147341728	2	588.377823	1174.74109	2.6418	0.0015544	0.48879	0.00028759	3.1306	0.001842	588.3781725106446	105.97	0.12274	106.03	105.96	106.08	0.05455					18	5	4	0	0	0	0.85019	1	45061	45061		0.52476	0	1	151860000	+		9450	9409	4609	4631	11472	11472					0.16071306127651042
HKLLAAIIAIF	11	Unmodified	_HKLLAAIIAIF_					0	0	0		tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1987487673759	4	303.198405	1208.76451	0.16026	4.859E-05	1.0072	0.00030537	1.1674	0.00035396	303.1985862636281	32.312	0.76095	34.136	33.818	34.579	1.8246					68	28	4	0	0	0	1.0357	1	13661	13661		1.4551	0.82829	1	6319200			9451	16333	4610	4632	11473	11473					0.16848307121563266
HKQILVKIIAK	11	Unmodified	_HKQILVKIIAK_					0	0	0			REV__ENSG00000176925|ENST00000322110|OR51F2	REV__ENSG00000176925|ENST00000322110|OR51F2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.958852	1289.85473	1.4306	0.00061653	3.365	0.0014502	4.7956	0.0020667	430.96022733482636	23.871	0.21657	25.112	24.989	25.206	1.241					10	6	2	0	0	0	0.14606	1	9948	9948		0.08335	0	1	263190	+		9452	11198	4611	4633	11474	11474					0.22139356450043124
HKQILVKIIAK	11	Unmodified	_HKQILVKIIAK_					0	0	0			REV__ENSG00000176925|ENST00000322110|OR51F2	REV__ENSG00000176925|ENST00000322110|OR51F2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.958852	1289.85473	0.60508	0.00026076	3.9647	0.0017086	4.5698	0.0019694	431.2956284541042	23.403	0.21881	25.054	24.991	25.209	1.6511					12	6	2	0	0	0	0.14606	1	9798	9798		0.08335	0	1	716030	+		9453	11198	4611	4633	11475	11475					0.22139356450043124
HKQLWLLLIIL	11	Unmodified	_HKQLWLLLIIL_					0	0	0		tr|A0A553SGW9|A0A553SGW9_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11720PE=3SV=1	tr|A0A553SGW9|A0A553SGW9_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11720PE=3SV=1	tr|A0A553SGW9|A0A553SGW9_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11720PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	464.1461059451103	3	463.970869	1388.89078	2.3745	0.0011017	0.68485	0.00031775	3.0593	0.0014194	463.97100532406773	47.617	1.2293	48.999	48.599	49.828	1.3825					66	38	2	0	0	0	0.14606	1	19801	19801		0.094841	0	1	2542200			9454	16126	4612	4634	11476	11476					0.2118881362691809
HKREFQVKKHG	11	Unmodified	_HKREFQVKKHG_					0	0	0			REV__ENSG00000152767|ENST00000319562|FARP1	REV__ENSG00000152767|ENST00000319562|FARP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	697.3978759646416	2	697.394202	1392.77385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.701	1	85.701	85.201	86.201	0								0	0	0	0.63775	1	35707	35707		1.3295	0.13619	1		+		9455	10432	4613	4635	11477	11477					0.09317468459812517
HKSEIAHR	8	Unmodified	_HKSEIAHR_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.0081054568291	3	326.51403	976.520262	-3.3283	-0.0010867	2.7992	0.00091397	-0.5291	-0.00017276	326.5149471520113	9.6167	0.29552	9.6167	9.4572	9.7527	0					16	12	2	0	0	0	2.3239	1	3953	3953		3.2813	2.8806	1	633210		+	9456	341	4614	4636	11478	11478					0.03106241080365635
HKSMALKGW	9	Unmodified	_HKSMALKGW_					0	0	0			REV__ENST00000216629.10_1_14:96722250-96722388:+|nuORF	REV__ENST00000216629.10_1_14:96722250-96722388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	353.1924316287041	3	353.1919	1056.55387	0.78876	0.00027858	0.06525	2.3046E-05	0.85401	0.00030163	353.19216106972675	66.195	1.383	67.584	67.113	68.496	1.3887					64	44	3	0	0	0	0.83753	1	27821	27821		0.96228	0	1	6326400	+		9457	12071	4615	4637	11479	11479					0.027855265279185915
HKSMALKGW	9	Unmodified	_HKSMALKGW_					0	0	0			REV__ENST00000216629.10_1_14:96722250-96722388:+|nuORF	REV__ENST00000216629.10_1_14:96722250-96722388:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	353.1920349001884	3	353.1919	1056.55387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.68	1	38.498	37.998	38.998	1.8176								0	0	0	0.42693	1	15390	15390		0.96228	0	1		+		9458	12071	4615	4637	11480	11480					0.027855265279185915
HKSRTWVYTQK	11	Unmodified	_HKSRTWVYTQK_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MSMS	GG20161007_CRH_Patient100_W632_01	3	717.0168945193291	2	717.386042	1432.75753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.67	1	112.84	112.34	113.34	0.16914								0	0	0	0.63769	1	48873	48873		13.615	2.1202	1		+		9459	8253	4616	4638	11481	11481					0.05846342503082269
HKTYKKHR	8	Unmodified	_HKTYKKHR_					0	0	0		nc|ENSG00000114948|O75077-3|ADAM23;nc|ENSG00000114948|O75077-2|ADAM23;ENSG00000114948|ENST00000264377|ADAM23	nc|ENSG00000114948|O75077-3|ADAM23	nc|ENSG00000114948|O75077-3|ADAM23	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	367.2694885134697	3	366.549075	1096.6254	0.14235	5.2177E-05	-4.4195	-0.00162	-4.2772	-0.0015678	366.54742380111554	86.221	0.26456	86.221	86.103	86.367	0					13	8	2	0	0	0	2.3239	1	35888	35888		1.4819	0	1	1168100			9460	1890	4617	4639	11482	11482					0.08094782276793921
HKVPVHPI	8	Unmodified	_HKVPVHPI_					0	0	0		ENST00000491836.2_1_6:166853785-166873036:-|nuORF;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2	ENST00000491836.2_1_6:166853785-166873036:-|nuORF	ENST00000491836.2_1_6:166853785-166873036:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9008666872978	3	309.523867	925.549771	-2.6821	-0.00083016	1.6565	0.00051273	-1.0256	-0.00031743	309.52408614711186	31.232	0.3606	31.232	31.049	31.41	0					13	11	2	0	0	0	2.3239	1	13113	13113		0.45834	0	1	439960			9461	867	4618	4640	11483	11483					0.08401805096514181
HKWALTRQRKR	11	Unmodified	_HKWALTRQRKR_					0	0	0			REV__ENST00000495360.5_1_9:32987651-32989804:-|nuORF	REV__ENST00000495360.5_1_9:32987651-32989804:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9650756716728	3	493.963771	1478.86948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4033	1	6.4033	5.9033	6.9033	0								0	0	0	0.63775	1	2629	2629		0.45452	0.046251	1		+		9462	13459	4619	4641	11484	11484					0.14920241370668919
HKWRIYYKKRL	11	Unmodified	_HKWRIYYKKRL_					0	0	0		nc|ENSG00000009950|Q9NP71-5|MLXIPL;nc|ENSG00000009950|Q9NP71-4|MLXIPL;nc|ENSG00000009950|Q9NP71-2|MLXIPL;nc|ENSG00000009950|Q9NP71-3|MLXIPL;ENSG00000009950|ENST00000313375|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	MSMS	GG20161007_CRH_Patient100_W632_01	3	530.9878417849541	3	530.984172	1589.93069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.292	1	94.164	93.664	94.664	0.87176								0	0	0	0.63775	1	39264	39264		0.094841	0	1				9463	541	4620	4642	11485	11485					0.1593175335012802
HKWRIYYKKRL	11	Unmodified	_HKWRIYYKKRL_					0	0	0		nc|ENSG00000009950|Q9NP71-5|MLXIPL;nc|ENSG00000009950|Q9NP71-4|MLXIPL;nc|ENSG00000009950|Q9NP71-2|MLXIPL;nc|ENSG00000009950|Q9NP71-3|MLXIPL;ENSG00000009950|ENST00000313375|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.9879638552666	3	530.984172	1589.93069	3.478	0.0018467	1.2096	0.0006423	4.6876	0.002489	530.9851740558529	92.844	0.99843	94.121	93.486	94.484	1.277					53	30	2	0	0	0	1.0402	1	39108	39108		0.094841	0	1	974050			9464	541	4620	4642	11486	11486					0.1593175335012802
HKWRIYYKKRL	11	Unmodified	_HKWRIYYKKRL_					0	0	0		nc|ENSG00000009950|Q9NP71-5|MLXIPL;nc|ENSG00000009950|Q9NP71-4|MLXIPL;nc|ENSG00000009950|Q9NP71-2|MLXIPL;nc|ENSG00000009950|Q9NP71-3|MLXIPL;ENSG00000009950|ENST00000313375|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	530.984172	1589.93069	2.8006	0.0014871	2.1275	0.0011297	4.9281	0.0026167	530.9855272929941	93.921	1.278	94.066	93.232	94.51	0.14494	-0.0016896	0.00017845	NaN	0.094841	93	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1127700			9465	541	4620	4642							0.1593175335012802
HKYLRLRRKLR	11	Unmodified	_HKYLRLRRKLR_					0	0	0			REV__ENST00000509910.1_1_5:115167175-115167292:-|nuORF	REV__ENST00000509910.1_1_5:115167175-115167292:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1534911990166	4	385.502118	1537.97937	2.1816	0.00084101	1.3442	0.00051819	3.5258	0.0013592	385.5027212317877	56.75	1.0173	57.071	56.334	57.351	0.32103					49	36	2	0	0	0	0.14606	1	23470	23470		0.094841	0	1	6873700	+		9466	13564	4621	4643	11487	11487					0.23189666709890844
HKYTYFFTAL	10	Unmodified	_HKYTYFFTAL_					0	0	0		PKP4|p.A893_T894insMHFAHKYTYFF|1|0.12|ENSG00000144283|chr2:158666514-158666515|-/ATGCATTTTGCACACAAATATACTTACTTTTTC|inframe_insertion	PKP4|p.A893_T894insMHFAHKYTYFF|1|0.12|ENSG00000144283|chr2:158666514-158666515|-/ATGCATTTTGCACACAAATATACTTACTTTTTC|inframe_insertion	PKP4|p.A893_T894insMHFAHKYTYFF|1|0.12|ENSG00000144283|chr2:158666514-158666515|-/ATGCATTTTGCACACAAATATACTTACTTTTTC|inframe_insertion	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889953494072	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.928	1	32.743	32.243	33.243	1.8151								0	0	0	0.66151	1	12964	12964		1.9064	0.45126	1				9467	8055	4622	4644	11488	11488					0.011222740572065959
HLAELIAEL	9	Unmodified	_HLAELIAEL_					0	0	0		nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.7912475466728	2	504.78985	1007.56515	1.9258	0.00097215	-0.42971	-0.00021692	1.4961	0.00075523	504.7901491083225	65.254	0.57117	65.254	65.008	65.579	0					42	17	3	0	0	0	0.051699	4	27238	27148;27193;27238;27291		67.344	27.387	1	2590000			9468	3387	4623	4645	11489;11490;11491;11492	11491					0.06166627103038991
HLAELIAEL	9	Unmodified	_HLAELIAEL_					0	0	0		nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.7907897830009	2	504.78985	1007.56515	2.3159	0.001169	-0.4645	-0.00023448	1.8514	0.00093455	504.7900152354898	64.727	0.66585	65.053	64.819	65.485	0.32689					46	20	3	0	0	0	0.051699	4	27091	27045;27091;27149;27214		67.344	17.16	1	3207600			9469	3387	4623	4645	11493;11494;11495;11496	11494					0.06166627103038991
HLAELIAEL	9	Unmodified	_HLAELIAEL_					0	0	0		nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7911254763603	2	504.78985	1007.56515	2.5853	0.001305	-0.25525	-0.00012885	2.33	0.0011762	504.7900294540609	63.486	0.8762	64.899	64.596	65.472	1.4134					75	27	4	0	0	0	0.022807	3	26613	26563;26613;26664		97.075	32.838	1	9387700			9470	3387	4623	4645	11497;11498;11499	11498					0.06166627103038991
HLAELIAEL	9	Unmodified	_HLAELIAEL_					0	0	0		nc|ENSG00000154370|Q96F44-2|TRIM11;nc|ENSG00000154370|Q96F44-3|TRIM11;ENSG00000154370|ENST00000284551|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	nc|ENSG00000154370|Q96F44-2|TRIM11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7907592654228	2	504.78985	1007.56515	2.2551	0.0011383	-0.28371	-0.00014321	1.9714	0.00099513	504.78993137648877	62.914	1.0033	64.859	64.564	65.567	1.9444					74	31	4	0	0	0	0.0082953	3	26391	26341;26391;26443		109.63	35.207	1	11352000			9471	3387	4623	4645	11500;11501;11502	11501					0.06166627103038991
HLAGEREVQL	10	Unmodified	_HLAGEREVQL_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000007350	REV__CON__ENSEMBL:ENSBTAP00000007350	MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3102294802666	2	576.312012	1150.60947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.247	1	62.212	61.712	62.712	1.9653								0	0	0	0.65033	1	25281	25281		13.906	0.86358	1		+	+	9472	8370	4624	4646	11503	11503					0.04019031249231375
HLAIKLEQV	9	Unmodified	_HLAIKLEQV_					0	0	0		nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8203002810478	2	525.818941	1049.62333	0.75912	0.00039916	1.5023	0.00078996	2.2615	0.0011891	525.8196366914877	31.225	0.3118	32.506	32.343	32.655	1.2813					17	9	2	0	0	0	0.040497	1	13095	13095		75.761	31.903	1	1571100			9473	3101	4625	4647	11504	11504					0.10050308748327552
HLAIKLEQV	9	Unmodified	_HLAIKLEQV_					0	0	0		nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8192626833916	2	525.818941	1049.62333	0.89046	0.00046822	0.44886	0.00023602	1.3393	0.00070424	525.8187706518821	30.652	0.29788	32.467	32.294	32.591	1.8151					14	9	2	0	0	0	0.093059	1	12856	12856		51.63	20.993	1	1618500			9474	3101	4625	4647	11505	11505					0.10050308748327552
HLALQAPQS	9	Unmodified	_HLALQAPQS_					0	0	0			REV__nc|ENSG00000183495|Q96L91-4|EP400	REV__nc|ENSG00000183495|Q96L91-4|EP400	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1807128787041	3	322.178536	963.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.98	1	107.03	106.53	107.53	0.052452								0	0	0	0.42693	1	45678	45678		0.96228	0.50394	1		+		9475	11394	4626	4648	11506	11506					0.030563031289943865
HLAPLWPFL	9	Unmodified	_HLAPLWPFL_					0	0	0		ENST00000565325.5_1_15:73854253-73925580:-|nuORF;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN;ENSG00000156642|ENST00000345330|NPTN;USP32-NPTN|2|fusion;USP32-NPTN|1|fusion	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3162719607353	2	547.313295	1092.61204	5.6438	0.0030889	-0.27627	-0.00015121	5.3675	0.0029377	547.3131952288129	88.534	0.45213	89.59	89.401	89.853	1.0562					20	13	2	0	0	0	0.16975	1	37329	37329		36.466	22.958	1	885170			9476	3453	4627	4649	11507	11507					0.06943531444835571
HLAPLWPFL	9	Unmodified	_HLAPLWPFL_					0	0	0		ENST00000565325.5_1_15:73854253-73925580:-|nuORF;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN;ENSG00000156642|ENST00000345330|NPTN;USP32-NPTN|2|fusion;USP32-NPTN|1|fusion	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.8177978396416	2	547.313295	1092.61204	4.6505	0.0025453	1.3299	0.00072786	5.9804	0.0032732	547.3139776769794	88.13	0.38309	89.577	89.348	89.731	1.4467					17	11	2	0	0	0	0.24585	1	37110	37110		28.173	8.7342	1	585040			9477	3453	4627	4649	11508	11508					0.06943531444835571
HLARLYQV	8	Unmodified	_HLARLYQV_					0	0	0			REV__nc|ENSG00000187821|A6NFD8-4|HELT	REV__nc|ENSG00000187821|A6NFD8-4|HELT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2983886599541	2	500.290351	998.566149	2.3251	0.0011632	0.28487	0.00014252	2.61	0.0013058	500.2914454698393	64.258	0.81428	66.186	65.704	66.518	1.928					61	25	3	0	0	0	0.87106	1	27072	27072		14.582	2.0501	1	4513600	+		9478	11554	4628	4650	11509	11509					0.06680886262597596
HLARYINI	8	Unmodified	_HLARYINI_					0	0	0			REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|89|2|sense	REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|89|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2979614138603	2	500.290351	998.566149	3.1606	0.0015812	0.44974	0.000225	3.6104	0.0018062	500.2909951796815	64.688	0.74203	66.095	65.71	66.452	1.4071					59	23	3	0	0	0	0.80415	1	27257	27257		20.871	0	1	6054700	+		9479	14330	4629	4651	11510	11510					0.06680886262597596
HLAVFLWIII	10	Unmodified	_HLAVFLWIII_					0	0	0		nc|ENSG00000274355|Q4VXF1|FAM74A3;nc|ENSG00000277260|A6NL05|FAM74A7;nc|ENSG00000215112|Q5RGS3|FAM74A1	nc|ENSG00000274355|Q4VXF1|FAM74A3	nc|ENSG00000274355|Q4VXF1|FAM74A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	612.8802368044853	2	612.878802	1223.74305	2.3494	0.0014399	0.24986	0.00015313	2.5993	0.001593	612.8789699738813	92.457	0.54774	92.457	92.164	92.712	0					69	17	5	0	0	0	0.87343	1	38638	38638		4.3292	0	1	43255000			9480	8016	4630	4652	11511	11511					0.1401292209291114
HLAVLLRDKLI	11	Unmodified	_HLAVLLRDKLI_					0	0	0			REV__nc|ENSG00000085382|Q8IYU2-2|HACE1	REV__nc|ENSG00000085382|Q8IYU2-2|HACE1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	324.2015563845634	4	323.461862	1289.81834	1.1255	0.00036407	2.8762	0.00093033	4.0017	0.0012944	323.4629295725942	42.149	0.26128	42.47	42.313	42.574	0.32058					12	8	2	0	0	0	0.14606	1	17649	17649		0.50596	0.4226	1	560970	+		9481	8849	4631	4653	11512	11512					0.18502479553330886
HLCRYLKHL	9	Unmodified	_HLCRYLKHL_					0	0	0		ENST00000262424.9_1_16:84914153-84922894:+|nuORF	ENST00000262424.9_1_16:84914153-84922894:+|nuORF	ENST00000262424.9_1_16:84914153-84922894:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.8920165896416	3	394.890332	1181.64917	-0.1521	-6.0064E-05	3.8558	0.0015226	3.7037	0.0014626	394.8920555883933	36.293	0.12155	36.293	36.238	36.36	0					14	11	2	0	0	0	0.64949	1	15228	15228		5.7319	0	1	14654000			9482	5637	4632	4654	11513	11513					0.06560879718972501
HLCRYLKHL	9	Unmodified	_HLCRYLKHL_					0	0	0		ENST00000262424.9_1_16:84914153-84922894:+|nuORF	ENST00000262424.9_1_16:84914153-84922894:+|nuORF	ENST00000262424.9_1_16:84914153-84922894:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.8911926150322	3	394.890332	1181.64917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.113	1	35.388	34.888	35.888	1.2746								0	0	0	0.39421	1	14320	14320		5.7319	0	1				9483	5637	4632	4654	11514	11514					0.06560879718972501
HLDATKLLL	9	Unmodified	_HLDATKLLL_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.3154785037041	2	512.313492	1022.61243	2.157	0.0011051	2.1514	0.0011022	4.3084	0.0022073	512.3148376987313	46.13	0.28128	46.13	46.04	46.321	0					13	8	2	0	0	0	0.27148	2	19300	19300;19349		26.884	11.036	1	568640			9484	706	4633	4655	11515;11516	11515					0.10202906374036047
HLDATKLLL	9	Unmodified	_HLDATKLLL_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.3163329958916	2	512.313492	1022.61243	1.915	0.00098109	2.2054	0.0011299	4.1204	0.002111	512.3147879714745	45.589	0.29469	45.918	45.754	46.049	0.32899					16	9	2	0	0	0	0.15635	2	19153	19110;19153		37.974	20.861	1	876370			9485	706	4633	4655	11517;11518	11518					0.10202906374036047
HLDATKLLL	9	Unmodified	_HLDATKLLL_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.3152343630791	2	512.313492	1022.61243	2.4999	0.0012807	0.18172	9.3098E-05	2.6816	0.0013738	512.3134575666379	44.03	0.31025	45.384	45.191	45.502	1.3536					17	9	2	0	0	0	0.023685	3	18467	18422;18467;18509		96.367	41.593	1	3540400			9486	706	4633	4655	11519;11520;11521	11520					0.10202906374036047
HLDATKLLL	9	Unmodified	_HLDATKLLL_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.3130981326103	2	512.313492	1022.61243	2.4351	0.0012475	-1.2252	-0.00062769	1.2099	0.00061986	512.3123477004557	43.375	0.29312	45.319	45.134	45.427	1.9438					21	9	3	0	0	0	0.026734	2	18195	18149;18195		92.653	37.88	1	2667900			9487	706	4633	4655	11522;11523	11523					0.10202906374036047
HLDQPDQTD	9	Unmodified	_HLDQPDQTD_					0	0	0			REV__ENST00000420167.6_1_12:110007871-110011277:-|nuORF	REV__ENST00000420167.6_1_12:110007871-110011277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7336913943291	2	534.73326	1067.45197	3.0212	0.0016156	-2.6393	-0.0014113	0.38198	0.00020426	534.732130885068	64.259	0.46035	65.666	65.433	65.894	1.4071					75	14	7	0	0	0	0.66458	1	26895	26895		8.7454	0.58988	1	13136000	+		9488	12971	4634	4656	11524	11524					-0.07906093080805476
HLDVVQLLV	9	Unmodified	_HLDVVQLLV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1388427615166	2	518.313492	1034.61243	1.4551	0.00075421	2.7721	0.0014368	4.2272	0.002191	518.3154866221578	70.393	0.36271	70.715	70.56	70.923	0.32224					22	11	3	0	0	0	0.11812	1	29449	29449		4.756	4.1545	1	1450900			9489	2533	4635	4657	11525	11525					0.09650906374031365
HLDVVQLLV	9	Unmodified	_HLDVVQLLV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3120605349541	2	518.313492	1034.61243	1.7427	0.00090327	-1.2511	-0.00064848	0.49159	0.0002548	518.311193184346	68.663	0.30174	70.516	70.346	70.648	1.853					20	9	3	0	0	0	0.22154	1	28813	28813		30.637	10.183	1	2603900			9490	2533	4635	4657	11526	11526					0.09650906374031365
HLDVVQLLV	9	Unmodified	_HLDVVQLLV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.313492	1034.61243	2.16	0.0011196	-2.4033	-0.0012457	-0.24328	-0.00012609	518.3111377321844	69.222	0.31484	70.588	70.443	70.758	1.3657	0.036114	-0.00052131	NaN	30.637	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2887800			9491	2533	4635	4657							0.09650906374031365
HLEELGLLKM	10	Unmodified	_HLEELGLLKM_					0	0	0		tr|A0A553SJZ2|A0A553SJZ2_NIACIDNApolymeraseIIIsubunitalphaOS=NialliacirculansOX=1397GN=CEQ21_17785PE=3SV=1	tr|A0A553SJZ2|A0A553SJZ2_NIACIDNApolymeraseIIIsubunitalphaOS=NialliacirculansOX=1397GN=CEQ21_17785PE=3SV=1	tr|A0A553SJZ2|A0A553SJZ2_NIACIDNApolymeraseIIIsubunitalphaOS=NialliacirculansOX=1397GN=CEQ21_17785PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.8914672732353	3	394.889886	1181.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.951	1	34.775	34.275	35.275	1.8246								0	0	0	0.65378	1	13812	13812		6.1918	0.46	1				9492	16265	4636	4658	11527	11527					0.06427200839516445
HLEFLYLFVV	10	Unmodified	_HLEFLYLFVV_					0	0	0		ENST00000433579.1_1_7:42961481-42964274:-|nuORF	ENST00000433579.1_1_7:42961481-42964274:-|nuORF	ENST00000433579.1_1_7:42961481-42964274:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	639.6282836794853	2	640.357899	1278.70125	2.726	0.0017456	3.8875	0.0024894	6.6135	0.004235	640.3596806480388	107.38	0.11311	107.53	107.47	107.58	0.15781					9	5	3	0	0	0	0.1256	1	46188	46188		0.45834	0.057624	1	15971000			9493	6516	4637	4659	11528	11528					0.07304321613673892
HLEKLQTL	8	Unmodified	_HLEKLQTL_					0	0	0			REV__ENST00000464074.6_1_10:16769067-16859404:-|nuORF	REV__ENST00000464074.6_1_10:16769067-16859404:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	491.7641479372978	2	491.290017	980.565481	2.0263	0.00099549	-0.2125	-0.0001044	1.8138	0.00089109	491.2886966870207	46.669	0.39184	48.64	48.41	48.802	1.9703					38	12	4	0	0	0	2.3239	1	19524	19524		52.268	3.9225	1	3140400	+		9494	10349	4638	4660	11529	11529					0.07442046822893644
HLENGDAIPRM	11	Unmodified	_HLENGDAIPRM_					0	0	0		tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	418.2095825076103	3	418.208278	1251.60301	0.8134	0.00034017	2.0474	0.00085623	2.8608	0.0011964	418.2091968020909	43.763	0.70153	43.763	43.523	44.225	0					45	21	4	0	0	0	0.84637	1	18285	18285		10.315	2.1597	1	4955400			9495	16347	4639	4661	11530	11530					-0.01273229973821799
HLENGDAIPRM	11	Unmodified	_HLENGDAIPRM_					0	0	0		tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	tr|A0A553SLR1|A0A553SLR1_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21115PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	418.208278	1251.60301	2.0364	0.00085163	0.51492	0.00021534	2.5513	0.001067	418.2084579918354	43.173	0.35358	43.497	43.29	43.643	0.32389	-0.13308	-0.0013993	NaN	10.315	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1756900			9496	16347	4639	4661							-0.01273229973821799
HLENTHRI	8	Unmodified	_HLENTHRI_					0	0	0		tr|A0A553SJ97|A0A553SJ97_NIACICopper-exportingP-typeATPaseOS=NialliacirculansOX=1397GN=CEQ21_16430PE=3SV=1	tr|A0A553SJ97|A0A553SJ97_NIACICopper-exportingP-typeATPaseOS=NialliacirculansOX=1397GN=CEQ21_16430PE=3SV=1	tr|A0A553SJ97|A0A553SJ97_NIACICopper-exportingP-typeATPaseOS=NialliacirculansOX=1397GN=CEQ21_16430PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.8448058962822	2	510.27269	1018.53083	1.8337	0.0009357	2.1469	0.0010955	3.9806	0.0020312	510.77476998188365	66.609	0.21544	68.498	68.341	68.557	1.8889					13	6	3	0	0	0	2.3239	1	27948	27948		20.454	3.5113	1	853000			9497	16234	4640	4662	11531	11531					0.022302237348071685
HLFGVLYL	8	Unmodified	_HLFGVLYL_					0	0	0			REV__ENST00000462099.1_1_2:103348834-103353269:-|nuORF	REV__ENST00000462099.1_1_2:103348834-103353269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2809936404228	2	481.278921	960.543289	1.6142	0.0007769	3.0912	0.0014877	4.7054	0.0022646	481.2802303911249	78.01	0.53043	79.761	79.526	80.057	1.7514					50	16	4	0	0	0	0.88958	1	32710	32710		2.8892	2.8892	1	10501000	+		9498	13206	4641	4663	11532	11532					0.061438671451242044
HLFPTKRRL	9	Unmodified	_HLFPTKRRL_					0	0	0			REV__ENST00000473202.1_1_2:224840506-224840587:-|nuORF	REV__ENST00000473202.1_1_2:224840506-224840587:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	584.3146240115166	2	584.359099	1166.70365	1.3515	0.00078974	-2.9013	-0.0016954	-1.5498	-0.00090564	584.3572519499879	71.194	0.99309	73.018	72.577	73.57	1.824					55	31	2	0	0	0	0.11787	1	29703	29703		5.2307	0.90143	1	2196700	+		9499	13300	4642	4664	11533	11533					0.1269621486203505
HLFTRIPV	8	Unmodified	_HLFTRIPV_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1998168826103	3	328.199272	981.575986	0.6417	0.0002106	1.7282	0.00056718	2.3699	0.00077779	328.19987610102856	32.434	0.83593	32.728	32.123	32.959	0.29431					90	26	5	0	0	0	0.88163	1	13692	13692		9.3831	3.1773	1	78002000			9500	5347	4643	4665	11534	11534					0.08446074267988024
HLFTRIPV	8	Unmodified	_HLFTRIPV_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	328.199272	981.575986	-2.3093	-0.00075789	3.2912	0.0010802	0.98199	0.00032229	328.2003095172002	33.025	0.57637	33.025	32.688	33.265	0	0.11962	0.0006016	NaN	9.3831	81	19	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	78288000			9501	5347	4643	4665							0.08446074267988024
HLFVRPQL	8	Unmodified	_HLFVRPQL_					0	0	0			REV__ADAD2|p.K330Q|1|0.17|ENSG00000140955|chr16:84195633-84195633|A/C|missense_variant	REV__ADAD2|p.K330Q|1|0.17|ENSG00000140955|chr16:84195633-84195633|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3064758181572	2	505.300719	1008.58688	2.1575	0.0010902	2.4501	0.0012381	4.6076	0.0023282	505.30188513175364	43.585	0.45519	44.939	44.677	45.132	1.3536					34	14	3	0	0	0	0.62161	1	18227	18227		38.151	6.0342	1	5524600	+		9502	8078	4644	4666	11535	11535					0.08293476642290898
HLGALLAR	8	Unmodified	_HLGALLAR_					0	0	0		ENSG00000187094|ENST00000396169|CCK;ENST00000484359.1_1_3:42304789-42306234:-|nuORF	ENSG00000187094|ENST00000396169|CCK	ENSG00000187094|ENST00000396169|CCK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7670165896416	2	425.766512	849.518471	0.9574	0.00040763	-0.48784	-0.00020771	0.46955	0.00019992	425.7664452242287	21.02	0.3204	22.146	21.955	22.276	1.1254					20	10	3	0	0	0	0.11104	1	8752	8752		90.836	0	1	1999700			9503	4816	4645	4667	11536	11536					0.08769232062422816
HLGALLAR	8	Unmodified	_HLGALLAR_					0	0	0		ENSG00000187094|ENST00000396169|CCK;ENST00000484359.1_1_3:42304789-42306234:-|nuORF	ENSG00000187094|ENST00000396169|CCK	ENSG00000187094|ENST00000396169|CCK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7670165896416	2	425.766512	849.518471	0.45487	0.00019367	-0.56916	-0.00024233	-0.11429	-4.866E-05	425.76636997986054	20.529	0.35099	22.103	21.942	22.293	1.5748					19	11	2	0	0	0	0.38673	2	8576	8524;8576		56.541	0	1	1789700			9504	4816	4645	4667	11537;11538	11538					0.08769232062422816
HLGDFLVFL	9	Unmodified	_HLGDFLVFL_					0	0	0		ENSG00000103657|ENST00000443617|HERC1;HERC1|p.Q2480Lfs*11|1|0.07|ENSG00000103657|chr15:63674749-63674750|-/A|frameshift_variant	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	530.7947875857353	2	530.794935	1059.57532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.432	1	92.432	91.932	92.932	0								0	0	0	0.24103	1	38626	38626		23.148	9.6405	1				9505	1440	4646	4668	11539	11539					0.047912348282807216
HLGDFLVFL	9	Unmodified	_HLGDFLVFL_					0	0	0		ENSG00000103657|ENST00000443617|HERC1;HERC1|p.Q2480Lfs*11|1|0.07|ENSG00000103657|chr15:63674749-63674750|-/A|frameshift_variant	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7972289919853	2	530.794935	1059.57532	4.1719	0.0022144	-1.3775	-0.00073116	2.7944	0.0014832	530.7945828417821	90.997	0.66817	91.978	91.749	92.417	0.98157					39	20	3	0	0	0	0.12174	1	38293	38293		42.095	11.87	1	2179500			9506	1440	4646	4668	11540	11540					0.047912348282807216
HLGDFLVFL	9	Unmodified	_HLGDFLVFL_					0	0	0		ENSG00000103657|ENST00000443617|HERC1;HERC1|p.Q2480Lfs*11|1|0.07|ENSG00000103657|chr15:63674749-63674750|-/A|frameshift_variant	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7977172732353	2	530.794935	1059.57532	4.0799	0.0021656	-0.51181	-0.00027167	3.5681	0.0018939	530.7948575015456	90.514	0.57973	91.88	91.607	92.186	1.366					38	17	3	0	0	0	0.09539	2	38125	38079;38125		50.855	20.63	1	2496000			9507	1440	4646	4668	11541;11542	11542					0.047912348282807216
HLGILSFVL	9	Unmodified	_HLGILSFVL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8087951540947	2	499.805303	997.596052	3.0933	0.001546	2.7409	0.0013699	5.8342	0.002916	499.80690867369685	60.509	0.4043	61.928	61.748	62.153	1.4196					36	12	4	0	0	0	0.10722	1	25394	25394		46.921	1.1709	1	4584800	+		9508	9320	4647	4669	11543	11543					0.09715825207945272
HLGILSFVL	9	Unmodified	_HLGILSFVL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	499.805303	997.596052	3.0933	0.001546	2.7409	0.0013699	5.8342	0.002916	499.80690867369685	60.509	0.4043	61.928	61.748	62.153	1.4196	0.012898	-0.00030205	NaN	46.921	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4584800	+		9509	9320	4647	4669							0.09715825207945272
HLGILSFVL	9	Unmodified	_HLGILSFVL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.805303	997.596052	2.87	0.0014344	3.3165	0.0016576	6.1865	0.003092	499.80710008195587	59.934	0.40752	61.903	61.733	62.14	1.969	-0.012898	0.00027329	NaN	46.921	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4506100	+		9510	9320	4647	4669							0.09715825207945272
HLGSGGGG	8	Unmodified	_HLGSGGGG_					0	0	0			REV__nc|ENSG00000143376|Q96L92-3|SNX27	REV__nc|ENSG00000143376|Q96L92-3|SNX27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	321.1554748415947	2	321.15372	640.292888	3.5522	0.0011408	-2.5039	-0.00080415	1.0482	0.00033664	321.15465570982013	86.288	1.0899	87.835	87.512	88.602	1.547					144	38	6	0	0	0	0.89008	1	36471	36471		2.5775	0	1	44648000	+		9511	10207	4648	4670	11544	11544					-0.041647171276053996
HLGSGGGG	8	Unmodified	_HLGSGGGG_					0	0	0			REV__nc|ENSG00000143376|Q96L92-3|SNX27	REV__nc|ENSG00000143376|Q96L92-3|SNX27	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	321.15372	640.292888	-1.3542	-0.00043491	4.2041	0.0013502	2.8499	0.00091526	321.15607132364585	87.833	0.5363	87.833	87.551	88.088	0	0.00041247	0.0027093	NaN	2.5775	56	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3304500	+		9512	10207	4648	4670							-0.041647171276053996
HLGSGGGG	8	Unmodified	_HLGSGGGG_					0	0	0			REV__nc|ENSG00000143376|Q96L92-3|SNX27	REV__nc|ENSG00000143376|Q96L92-3|SNX27	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	321.15372	640.292888	1.9319	0.00062045	0.88174	0.00028317	2.8137	0.00090362	321.1550849582287	87.633	0.49193	87.868	87.641	88.133	0.2347	0.035577	0.00057528	NaN	2.5775	50	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2099200	+		9513	10207	4648	4670							-0.041647171276053996
HLHITRQI	8	Unmodified	_HLHITRQI_					0	0	0			REV__ENSG00000173198|ENST00000373304|CYSLTR1	REV__ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.7910949587822	2	509.30125	1016.58795	2.8751	0.0014643	-1.6072	-0.00081855	1.2679	0.00064575	509.3010296154767	77.305	0.38179	78.585	78.346	78.728	1.2809					17	11	2	0	0	0	2.3239	1	32480	32480		15.768	0	1	2441300	+		9514	11086	4649	4671	11545	11545					0.08031691011160547
HLHLNLPIKPT	11	Unmodified	_HLHLNLPIKPT_					0	0	0			REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF	REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2587768435478	3	428.25919	1281.75574	0.92751	0.00039721	-1.1248	-0.00048171	-0.19729	-8.4493E-05	428.25895627863946	95.646	0.26803	95.646	95.453	95.721	0					18	8	3	0	0	0	1.0174	1	39956	39956		1.1098	0.096179	1	1376500	+		9515	14090	4650	4672	11546	11546					0.1261333348509197
HLIAIGEV	8	Unmodified	_HLIAIGEV_					0	0	0			REV__nc|ENSG00000127249|Q4VNC1-2|ATP13A4	REV__nc|ENSG00000127249|Q4VNC1-2|ATP13A4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	851.6268188357353	1	851.498529	850.491253	3.0702	0.0026143	0.36742	0.00031286	3.4376	0.0029271	851.4991254243647	106.91	0.11021	107.07	107.02	107.13	0.16174					7	4	2	0	0	0	2.3239	1	45843	45843		2.5775	0	1	12512000	+		9516	9710	4651	4673	11547	11547					0.060027037313943765
HLIDFMSEI	9	Unmodified	_HLIDFMSEI_					0	0	0		ENST00000477409.1_1_2:97001567-97024936:+|nuORF;chr2:96335848-96341675|416|19.33|0.71|4.76|+|ENST00000435975|NCAPH,NCAPH;ENSG00000121152|ENST00000240423|NCAPH	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7745239138603	2	552.773342	1103.53213	1.2154	0.00067185	-0.85274	-0.00047137	0.36268	0.00020048	552.7731389500855	70.615	0.60627	72.453	72.136	72.742	1.8378					53	19	4	0	0	0	0.24063	1	29544	29544		28.487	8.0332	1	4651700			9517	243	4652	4674	11548	11548					-0.015493230112952006
HLIDFMSEI	9	Unmodified	_HLIDFMSEI_					0	0	0		ENST00000477409.1_1_2:97001567-97024936:+|nuORF;chr2:96335848-96341675|416|19.33|0.71|4.76|+|ENST00000435975|NCAPH,NCAPH;ENSG00000121152|ENST00000240423|NCAPH	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.773342	1103.53213	1.7936	0.00099145	-0.61561	-0.00034029	1.178	0.00065116	552.7738427901336	72.047	0.25615	72.372	72.259	72.515	0.32494	-0.053067	0.00077579	NaN	28.487	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374830			9518	243	4652	4674							-0.015493230112952006
HLIDFMSEI	9	Unmodified	_HLIDFMSEI_					0	0	0		ENST00000477409.1_1_2:97001567-97024936:+|nuORF;chr2:96335848-96341675|416|19.33|0.71|4.76|+|ENST00000435975|NCAPH,NCAPH;ENSG00000121152|ENST00000240423|NCAPH	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	ENST00000477409.1_1_2:97001567-97024936:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	552.773342	1103.53213	2.4801	0.001371	-2.0574	-0.0011373	0.42272	0.00023367	552.7728256858288	71.108	0.57529	72.449	72.054	72.629	1.3415	0.02451	-0.0008182	NaN	28.487	47	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4849600			9519	243	4652	4674							-0.015493230112952006
HLIDMCCPL	9	Unmodified	_HLIDMCCPL_					0	0	0			REV__ENST00000348367.8_1_10:113942591-113943479:-|nuORF	REV__ENST00000348367.8_1_10:113942591-113943479:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	349.5380737185478	3	348.827353	1043.46023	1.4943	0.00052125	0.10536	3.6751E-05	1.5997	0.00055801	348.8277782315284	48.731	0.3088	50.708	50.514	50.823	1.9772					12	9	2	0	0	0	0.11685	1	20421	20421		5.2969	1.3525	1	149290	+		9520	12526	4653	4675	11549	11549					-0.059762769610188116
HLIIKYKHRLK	11	Unmodified	_HLIIKYKHRLK_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|38|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|38|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|38|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9861328005791	4	362.98577	1447.91397	-0.66717	-0.00024217	1.6016	0.00058136	0.93444	0.00033919	362.98638335306435	33.626	0.3055	34.901	34.819	35.125	1.2746					115	32	5	0	0	0	1.039	1	14103	14103		0.45452	0.31463	1	279370000			9521	7677	4654	4676	11550	11550					0.20793252464181933
HLIILIHVP	9	Unmodified	_HLIILIHVP_					0	0	0		ENST00000334746.9_2_14:93762351-93762387:-|nuORF	ENST00000334746.9_2_14:93762351-93762387:-|nuORF	ENST00000334746.9_2_14:93762351-93762387:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	352.2300598025322	3	352.230572	1053.66989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.339	1	87.886	87.386	88.386	1.547								0	0	0	0.42693	1	36381	36381		0.26902	0.033176	1				9522	5904	4655	4677	11551	11551					0.1451979337030025
HLIKKGVLITA	11	Unmodified	_HLIKKGVLITA_					0	0	0		ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	ENSG00000188050|ENST00000340112|RNF133	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1192.778613269329	1	1192.7776	1191.77033	2.7579	0.0032896	-2.3151	-0.0027614	0.44282	0.00052818	1192.7744862955087	107.41	0.17105	107.57	107.49	107.66	0.15781					26	8	4	0	0	0	1.0395	1	46196	46196		0.30703	0.30703	1	42958000			9523	4849	4656	4678	11552	11552					0.18211405633292088
HLIMHKRIRKL	11	Unmodified	_HLIMHKRIRKL_					0	0	0			REV__ENSG00000249709|ENST00000339282|ZNF564	REV__ENSG00000249709|ENST00000339282|ZNF564	MSMS	GG20161007_CRH_Patient100_W632_01	3	723.2338744997978	2	722.955915	1443.89728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.06	1	102.23	101.73	102.73	0.17032								0	0	0	0.63775	1	42947	42947		0.35063	0	1		+		9524	11947	4657	4679	11553	11553					0.1930842830659003
HLINFSETL	9	Unmodified	_HLINFSETL_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2840453982353	2	537.284931	1072.55531	0.78898	0.00042391	-0.68476	-0.00036791	0.10423	5.6E-05	537.2851438154053	51.226	0.30535	52.62	52.468	52.773	1.3938					21	9	3	0	0	0	0.063746	1	21452	21452		62.573	16.873	1	2484600			9525	5452	4658	4680	11554	11554					0.021934390976639406
HLINFSETL	9	Unmodified	_HLINFSETL_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2805663943291	2	537.284931	1072.55531	0.63752	0.00034253	-0.11464	-6.1593E-05	0.52288	0.00028094	537.2852433950643	50.631	0.27259	52.606	52.454	52.727	1.9753					18	8	3	0	0	0	0.031145	2	21207	21207;21256		85.642	31.809	1	3003100			9526	5452	4658	4680	11555;11556	11555					0.021934390976639406
HLINYIIFL	9	Unmodified	_HLINYIIFL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.3414184451103	2	573.33951	1144.66447	2.2955	0.0013161	1.0764	0.00061717	3.3719	0.0019333	573.3407531635294	88.519	0.58698	88.519	88.304	88.891	0					38	18	3	0	0	0	0.1735	3	36971	36971;37021;37074		36.044	19.102	1	1417500			9527	3904	4659	4681	11557;11558;11559	11557					0.09792069787795299
HLINYIIFL	9	Unmodified	_HLINYIIFL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3406249880791	2	573.33951	1144.66447	2.4867	0.0014257	1.8245	0.0010461	4.3112	0.0024718	573.3406521943448	87.87	0.53021	88.104	87.978	88.508	0.23471					35	16	3	0	0	0	0.1735	3	36833	36833;36880;36949		36.044	19.102	1	1161200			9528	3904	4659	4681	11560;11561;11562	11560					0.09792069787795299
HLINYIIFL	9	Unmodified	_HLINYIIFL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3427001833916	2	573.33951	1144.66447	3.956	0.0022681	-0.057277	-3.2839E-05	3.8987	0.0022353	573.3393056491649	86.915	0.67268	88.007	87.818	88.49	1.0918					38	22	2	0	0	0	0.061246	3	36644	36644;36694;36760		63.563	31.257	1	2972900			9529	3904	4659	4681	11563;11564;11565	11563					0.09792069787795299
HLINYIIFL	9	Unmodified	_HLINYIIFL_					0	0	0		ENSG00000166471|ENST00000528080|TMEM41B;ENST00000524543.5_1_11:9304973-9316821:-|nuORF;ENST00000533867.1_1_11:9304973-9309374:-|nuORF	ENSG00000166471|ENST00000528080|TMEM41B	ENSG00000166471|ENST00000528080|TMEM41B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8410522341728	2	573.33951	1144.66447	4.2845	0.0024565	-2.7301	-0.0015653	1.5544	0.00089117	573.3377280786973	86.436	0.68035	87.983	87.797	88.477	1.547					38	23	2	0	0	0	0.087207	2	36419	36419;36512		53.576	28.902	1	2780800			9530	3904	4659	4681	11566;11567	11566					0.09792069787795299
HLKDKFWNFI	10	Unmodified	_HLKDKFWNFI_					0	0	0		ENST00000568657.1_1_16:56442078-56458825:-|nuORF;ENSG00000159461|ENST00000290649|AMFR	ENST00000568657.1_1_16:56442078-56458825:-|nuORF	ENST00000568657.1_1_16:56442078-56458825:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9119750857353	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8194	1	7.8957	7.3957	8.3957	0.07632								0	0	0	0.66254	1	3235	3235		0.15932	0	1				9531	3532	4660	4682	11568	11568					0.0540535807674587
HLKHKFRW	8	Unmodified	_HLKHKFRW_					0	0	0			REV__ENST00000333003.9_1_12:95434350-95442961:-|nuORF	REV__ENST00000333003.9_1_12:95434350-95442961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3336059451103	2	576.332885	1150.65122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.45	1	45.45	44.95	45.95	0								0	0	0	1.0178	1	19017	19017		0.69038	0.16561	1		+		9532	12456	4661	4683	11569	11569					0.08191676519095381
HLKIPINVL	9	Unmodified	_HLKIPINVL_					0	0	0			REV__tr|A0A553SLK7|A0A553SLK7_NIACINon-homologousendjoiningproteinKuOS=NialliacirculansOX=1397GN=kuPE=3SV=1	REV__tr|A0A553SLK7|A0A553SLK7_NIACINon-homologousendjoiningproteinKuOS=NialliacirculansOX=1397GN=kuPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.5620605349541	3	349.56221	1045.6648	0.28149	9.8397E-05	0.46848	0.00016376	0.74997	0.00026216	349.56240118313167	48.371	1.674	49.758	49.241	50.915	1.388					146	53	4	0	0	0	0.42097	1	20473	20473		19.362	3.2128	1	57760000	+		9533	14987	4662	4684	11570	11570					0.14379489507678045
HLKKLCVRL	9	Unmodified	_HLKKLCVRL_					0	0	0			REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.3546630740166	2	555.352428	1108.6903	2.1451	0.0011913	0.52654	0.00029242	2.6716	0.0014837	555.3527255020417	86.261	0.57384	86.261	85.945	86.519	0					62	18	4	0	0	0	0.83213	2	35858	35858;35908		2.0598	0.21551	1	137760000	+		9534	12468	4663	4685	11571;11572	11571					0.14030640758414847
HLKKLCVRL	9	Unmodified	_HLKKLCVRL_					0	0	0			REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3545410037041	2	555.352428	1108.6903	2.5242	0.0014018	0.070223	3.8998E-05	2.5944	0.0014408	555.3524635252306	86.078	0.55022	86.33	86.006	86.556	0.25227					59	17	4	0	0	0	0.83213	2	35909	35909;35997		2.0598	1.4583	1	103930000	+		9535	12468	4663	4685	11573;11574	11573					0.14030640758414847
HLKKLCVRL	9	Unmodified	_HLKKLCVRL_					0	0	0			REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	REV__ENST00000336095.10_1_20:3914180-3914489:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	555.352428	1108.6903	2.1451	0.0011913	0.52654	0.00029242	2.6716	0.0014837	555.3527255020417	86.261	0.57384	86.261	85.945	86.519	0	-0.15532	0.00071509	NaN	2.0598	62	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137760000	+		9536	12468	4663	4685							0.14030640758414847
HLKKRKKK	8	Unmodified	_HLKKRKKK_					0	0	0		chr17:39730291-39735365|164|15.12|0.68|4.48|-|1|MIEN1,None|1	chr17:39730291-39735365|164|15.12|0.68|4.48|-|1|MIEN1,None|1	chr17:39730291-39735365|164|15.12|0.68|4.48|-|1|MIEN1,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0696594119072	3	355.917099	1064.72947	0.50382	0.00017932	-2.7353	-0.00097353	-2.2315	-0.00079422	355.91602191182983	24.162	0.4292	24.404	24.104	24.533	0.24252					21	13	2	0	0	0	2.3239	1	10041	10041		0.45834	0.45834	1	1431800			9537	215	4664	4686	11575	11575					0.19969109104317795
HLKMVWKLL	9	Unmodified	_HLKMVWKLL_					0	0	0		ENST00000342992.10_3_2:179481608-179481719:-|nuORF	ENST00000342992.10_3_2:179481608-179481719:-|nuORF	ENST00000342992.10_3_2:179481608-179481719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3578979372978	2	584.357179	1166.69981	3.3962	0.0019846	-1.9024	-0.0011117	1.4938	0.00087289	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.75267	1	31249	31249		5.2307	0.47466	1	5910500			9538	5942	4665	4687	11576	11576					0.12312409043966
HLKTKRILRRN	11	Unmodified	_HLKTKRILRRN_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4829589724541	4	359.48366	1433.90553	0.34538	0.00012416	-2.1741	-0.00078154	-1.8287	-0.00065738	359.48278123304226	28.148	1.2888	29.924	28.954	30.243	1.7754					160	41	5	0	0	0	1.039	1	11633	11633		0.45452	0.046251	1	34011000			9539	7911	4666	4688	11577	11577					0.2059369854760007
HLLDFPNIVI	10	Unmodified	_HLLDFPNIVI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	590.8416015505791	2	590.839874	1179.66519	2.6455	0.0015631	0.3758	0.00022204	3.0213	0.0017851	590.8402556709904	84.667	0.38386	84.667	84.493	84.877	0					28	11	3	0	0	0	0.38174	2	35282	35282;35344		34.402	15.145	1	1691400			9540	4323	4667	4689	11578;11579	11578					0.082548644368444
HLLDFPNIVI	10	Unmodified	_HLLDFPNIVI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8420898318291	2	590.839874	1179.66519	2.3444	0.0013852	-2.7804	-0.0016428	-0.43598	-0.00025759	590.8406379698558	84.125	0.47337	84.386	84.156	84.629	0.26083					39	14	4	0	0	0	0.16044	1	35172	35172		53.833	27.565	1	1965200			9541	4323	4667	4689	11580	11580					0.082548644368444
HLLDFPNIVI	10	Unmodified	_HLLDFPNIVI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8414794802666	2	590.839874	1179.66519	2.4147	0.0014267	0.85186	0.00050331	3.2666	0.00193	590.8407546665967	83.184	0.43636	84.372	84.174	84.61	1.1879					31	13	3	0	0	0	0.043055	2	34936	34886;34936		81.89	29.622	1	2935400			9542	4323	4667	4689	11581;11582	11582					0.082548644368444
HLLDFPNIVI	10	Unmodified	_HLLDFPNIVI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8393432497978	2	590.839874	1179.66519	2.7235	0.0016092	0.060777	3.591E-05	2.7843	0.0016451	590.8400664752801	82.676	0.40114	84.346	84.173	84.574	1.67					28	12	3	0	0	0	0.10797	2	34676	34676;34724		62.573	18.714	1	3328600			9543	4323	4667	4689	11583;11584	11583					0.082548644368444
HLLDIAMGV	9	Unmodified	_HLLDIAMGV_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7660095095634	2	484.76532	967.516088	2.2616	0.0010964	-0.66081	-0.00032034	1.6008	0.00077601	484.76531036231995	61.608	0.34779	61.608	61.456	61.804	0					24	10	3	0	0	0	0.069258	2	25715	25663;25715		60.39	28.273	1	2292200			9544	4922	4668	4690	11585;11586	11586					0.031030155424446093
HLLDIAMGV	9	Unmodified	_HLLDIAMGV_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7664977908134	2	484.76532	967.516088	2.8691	0.0013908	-3.1924	-0.0015476	-0.32335	-0.00015675	484.7631865455594	61.05	0.56408	61.38	61.046	61.61	0.32974					34	17	3	0	0	0	0.069258	1	25581	25581		60.39	32.216	1	2145400			9545	4922	4668	4690	11587	11587					0.031030155424446093
HLLDIAMGV	9	Oxidation (M)	_HLLDIAM(Oxidation (M))GV_		HLLDIAM(1)GV		HLLDIAM(82)GV	0	0	1		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7652770876884	2	492.762778	983.511002	2.4184	0.0011917	3.3417	0.0016467	5.7601	0.0028384	492.76450978345224	47.644	0.40585	47.974	47.726	48.132	0.33034					21	13	3	0	0	0	0.033521	2	20004	19959;20004		81.864	53.377	1	1496900			9546	4922	4668	4691	11588;11589	11589		83			0.018587116798357783
HLLDLEEV	8	Unmodified	_HLLDLEEV_					0	0	0		ENSG00000167157|ENST00000372469|PRRX2;PRRX2-PPP2R4|2|fusion;PRRX2-PPP2R4|1|fusion;PRRX2-PPP2R4|3|fusion	ENSG00000167157|ENST00000372469|PRRX2	ENSG00000167157|ENST00000372469|PRRX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7660095095634	2	484.258382	966.502212	2.5654	0.0012423	1.7075	0.00082685	4.2729	0.0020692	484.25691936128015	59.845	0.63834	61.265	60.958	61.597	1.4196					61	20	5	0	0	0	0.56817	1	25125	25125		42.968	6.5019	1	13419000			9547	3952	4669	4692	11590	11590					0.017620613150029385
HLLDLEEV	8	Unmodified	_HLLDLEEV_					0	0	0		ENSG00000167157|ENST00000372469|PRRX2;PRRX2-PPP2R4|2|fusion;PRRX2-PPP2R4|1|fusion;PRRX2-PPP2R4|3|fusion	ENSG00000167157|ENST00000372469|PRRX2	ENSG00000167157|ENST00000372469|PRRX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7655212283134	2	484.258382	966.502212	2.5843	0.0012515	1.8486	0.0008952	4.4329	0.0021467	484.2568676067168	59.336	0.54473	61.305	61.067	61.612	1.969					46	17	4	0	0	0	0.42763	1	24946	24946		52.693	10.853	1	14177000			9548	3952	4669	4692	11591	11591					0.017620613150029385
HLLEEPIYL	9	Unmodified	_HLLEEPIYL_					0	0	0		ENSG00000065457|ENST00000564657|ADAT1;nc|ENSG00000065457|Q9BUB4-2|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.8126708865166	2	563.810782	1125.60701	1.721	0.00097032	1.8235	0.0010281	3.5445	0.0019984	563.8118607306825	60.492	0.44849	60.492	60.317	60.765	0					27	13	3	0	0	0	0.11478	2	25209	25209;25259		44.407	19.733	1	1716000			9549	788	4670	4693	11592;11593	11592					0.04923182791549152
HLLEEPIYL	9	Unmodified	_HLLEEPIYL_					0	0	0		ENSG00000065457|ENST00000564657|ADAT1;nc|ENSG00000065457|Q9BUB4-2|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.8118774294853	2	563.810782	1125.60701	2.221	0.0012522	0.51201	0.00028868	2.733	0.0015409	563.810733640434	59.842	0.41519	60.17	59.966	60.381	0.32809					30	13	3	0	0	0	0.061246	2	25108	25055;25108		63.563	33.338	1	2034300			9550	788	4670	4693	11594;11595	11595					0.04923182791549152
HLLEEPIYL	9	Unmodified	_HLLEEPIYL_					0	0	0		ENSG00000065457|ENST00000564657|ADAT1;nc|ENSG00000065457|Q9BUB4-2|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8109008669853	2	563.810782	1125.60701	1.3882	0.00078266	2.18	0.0012291	3.5682	0.0020118	563.8122250029919	58.621	0.59253	60.04	59.815	60.407	1.4181					38	18	3	0	0	0	0.02596	3	24552	24552;24597;24643		93.883	37.342	1	6556100			9551	788	4670	4693	11596;11597;11598	11596					0.04923182791549152
HLLEEPIYL	9	Unmodified	_HLLEEPIYL_					0	0	0		ENSG00000065457|ENST00000564657|ADAT1;nc|ENSG00000065457|Q9BUB4-2|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8115112185478	2	563.810782	1125.60701	1.0065	0.00056745	1.2182	0.00068686	2.2247	0.0012543	563.8115137752601	58.099	0.55751	60.068	59.871	60.429	1.969					37	17	3	0	0	0	0.02596	3	24366	24317;24366;24433		93.883	37.342	1	9724700			9552	788	4670	4693	11599;11600;11601	11600					0.04923182791549152
HLLGDQISL	9	Unmodified	_HLLGDQISL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;ENST00000493599.1_1_20:44979343-44980935:-|nuORF	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2806274294853	2	498.279649	994.544745	2.2115	0.0011019	1.5089	0.00075188	3.7204	0.0018538	498.2798087411627	47.759	0.40577	49.141	48.922	49.328	1.3825					23	12	3	0	0	0	0.091139	1	19983	19983		52.268	14.294	1	1049700			9553	998	4671	4694	11602	11602					0.04725456443236453
HLLGDQISL	9	Unmodified	_HLLGDQISL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF;ENST00000493599.1_1_20:44979343-44980935:-|nuORF	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2802917361259	2	498.279649	994.544745	2.3827	0.0011873	-0.40479	-0.0002017	1.9779	0.00098557	498.2793387916936	47.226	0.27954	49.202	49.063	49.343	1.976					13	8	2	0	0	0	0.13873	1	19787	19787		39.957	5.8549	1	725530			9554	998	4671	4694	11603	11603					0.04725456443236453
HLLGDVVFL	9	Unmodified	_HLLGDVVFL_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7964355349541	2	506.794935	1011.57532	2.0234	0.0010255	0.15017	7.6104E-05	2.1736	0.0011016	506.79519533657657	74.497	0.31878	74.497	74.334	74.653	0					15	9	2	0	0	0	0.34572	2	31005	31005;31057		23.148	8.5667	1	453730			9555	2766	4672	4695	11604;11605	11604					0.06999234828288081
HLLGDVVFL	9	Unmodified	_HLLGDVVFL_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7962524294853	2	506.794935	1011.57532	2.7406	0.0013889	0.3586	0.00018174	3.0992	0.0015706	506.79491068934993	73.932	0.351	74.257	74.04	74.391	0.32494					18	10	2	0	0	0	0.46905	1	30933	30933		16.942	3.4344	1	566580			9556	2766	4672	4695	11606	11606					0.06999234828288081
HLLHRHRRRLR	11	Unmodified	_HLLHRHRRRLR_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000110719|Q13488-2|TCIRG1;ENSG00000110719|ENST00000265686|TCIRG1	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	775.4805175662041	2	775.4798	1548.94505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105	1	105	104.5	105.5	0								0	0	0	0.63775	1	44465	44465		0	0	1				9557	7180	4673	4696	11607	11607					0.19253263341647653
HLLKKAVGHF	10	Unmodified	_HLLKKAVGHF_					0	0	0		METTL13|p.I166L|1|0.08|ENSG00000010165|chr1:171784082-171784082|A/C|missense_variant	METTL13|p.I166L|1|0.08|ENSG00000010165|chr1:171784082-171784082|A/C|missense_variant	METTL13|p.I166L|1|0.08|ENSG00000010165|chr1:171784082-171784082|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3495361208916	2	575.3482	1148.68185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.352	1	99.352	98.852	99.852	0								0	0	0	0.66155	1	41580	41580		1.8442	0	1				9558	7798	4674	4697	11608	11608					0.11345410113472099
HLLLDQVTV	9	Unmodified	_HLLLDQVTV_					0	0	0		nc|ENSG00000008300|Q9NYQ7-2|CELSR3;ENSG00000008300|ENST00000164024|CELSR3	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1400024294853	2	519.303124	1036.5917	2.0882	0.0010844	2.8151	0.0014619	4.9033	0.0025463	519.3049917627882	54.225	0.22292	54.546	54.444	54.667	0.32088					9	6	2	0	0	0	0.10306	1	22737	22737		13.508	4.9146	1	887780			9559	529	4675	4698	11609	11609					0.07486315994378856
HLLLEAVPA	9	Unmodified	_HLLLEAVPA_					0	0	0		nc|ENSG00000130508|Q92626-2|PXDN;ENSG00000130508|ENST00000252804|PXDN	nc|ENSG00000130508|Q92626-2|PXDN	nc|ENSG00000130508|Q92626-2|PXDN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7876159548759	2	481.78711	961.559667	1.9179	0.00092404	1.2251	0.00059024	3.143	0.0015143	481.78796748667526	45.833	0.47144	47.208	47.053	47.524	1.3751					26	14	3	0	0	0	0.22519	2	19186	19186;19238		30.225	16.717	1	1192700			9560	2437	4676	4699	11610;11611	11610					0.07734948311224343
HLLLEAVPA	9	Unmodified	_HLLLEAVPA_					0	0	0		nc|ENSG00000130508|Q92626-2|PXDN;ENSG00000130508|ENST00000252804|PXDN	nc|ENSG00000130508|Q92626-2|PXDN	nc|ENSG00000130508|Q92626-2|PXDN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7877075076103	2	481.78711	961.559667	1.4433	0.00069537	1.2267	0.00059103	2.6701	0.0012864	481.7874744304906	45.368	0.4418	47.328	47.115	47.556	1.9596					22	13	2	0	0	0	0.22519	2	18986	18986;19041		30.225	16.717	1	1056900			9561	2437	4676	4699	11612;11613	11612					0.07734948311224343
HLLLLMFEVLV	11	Unmodified	_HLLLLMFEVLV_					0	0	0		ENST00000517359.1_1_X:148690238-148690502:-|nuORF;ENST00000502900.2_1_X:148688442-148693021:-|nuORF;ENSG00000269556|ENST00000600449|TMEM185A;ENSG00000226479|ENST00000426077|TMEM185B	ENST00000517359.1_1_X:148690238-148690502:-|nuORF	ENST00000517359.1_1_X:148690238-148690502:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8964721560478	2	663.896334	1325.77812	2.3028	0.0015288	-0.48865	-0.00032441	1.8142	0.0012044	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0362	1	35056	35056		1.3295	0.13619	1	5935800			9562	5294	4677	4700	11614	11614					0.1282579683854692
HLLLLMFEVLV	11	Unmodified	_HLLLLMFEVLV_					0	0	0		ENST00000517359.1_1_X:148690238-148690502:-|nuORF;ENST00000502900.2_1_X:148688442-148693021:-|nuORF;ENSG00000269556|ENST00000600449|TMEM185A;ENSG00000226479|ENST00000426077|TMEM185B	ENST00000517359.1_1_X:148690238-148690502:-|nuORF	ENST00000517359.1_1_X:148690238-148690502:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8968994021416	2	663.896334	1325.77812	2.4525	0.0016282	-0.21406	-0.00014211	2.2385	0.0014861	663.895955838561	80.436	1.3194	81.688	80.769	82.088	1.2512					99	42	3	0	0	0	1.0362	1	33702	33702		1.3295	0	1	2397800			9563	5294	4677	4700	11615	11615					0.1282579683854692
HLLLWTQR	8	Unmodified	_HLLLWTQR_					0	0	0			REV__ENSG00000146540|ENST00000397098|C7orf50	REV__ENSG00000146540|ENST00000397098|C7orf50	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1906005740166	2	533.811451	1065.60835	1.2741	0.00068013	-0.4303	-0.0002297	0.8438	0.00045043	533.8113790656358	57.198	0.17577	58.613	58.491	58.667	1.4145					7	5	2	0	0	0	2.3239	1	23963	23963		10.183	0.83596	1	936290	+		9564	10307	4678	4701	11616	11616					0.07816861670971775
HLLLYQRR	8	Unmodified	_HLLLYQRR_					0	0	0			REV__nc|ENSG00000144712|O75155-2|CAND2	REV__nc|ENSG00000144712|O75155-2|CAND2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	549.4172851443291	2	549.830175	1097.6458	0.875	0.0004811	2.9701	0.001633	3.8451	0.0021141	549.832092808738	107.6	0.15646	107.6	107.49	107.65	0					10	7	2	0	0	0	2.3239	1	46096	46096		2.5775	0.27475	1	5858600	+		9565	14454	4679	4702	11617	11617					0.10087952936601141
HLLNESPML	9	Unmodified	_HLLNESPML_					0	0	0		ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF;NUP205|p.A873*|1|0.07|ENSG00000155561|chr7:135602906-135602909|CTGG/-|frameshift_variant	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2750121951103	2	527.273509	1052.53247	2.3464	0.0012372	-1.309	-0.00069018	1.0374	0.00054701	527.2727533692406	40.995	0.47205	42.321	42.084	42.556	1.3254					40	14	4	0	0	0	0.031377	1	17198	17198		85.272	10.343	1	3843800			9566	3423	4680	4703	11618	11618					0.008300967085460798
HLLNESPML	9	Unmodified	_HLLNESPML_					0	0	0		ENSG00000155561|ENST00000285968|NUP205;ENST00000607647.5_1_7:135285632-135291519:+|nuORF;NUP205|p.A873*|1|0.07|ENSG00000155561|chr7:135602906-135602909|CTGG/-|frameshift_variant	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2745239138603	2	527.273509	1052.53247	2.2348	0.0011783	-1.4509	-0.00076503	0.78387	0.00041331	527.2728878541816	40.564	0.44106	42.427	42.233	42.675	1.8624					40	13	4	0	0	0	0.059546	2	17014	16968;17014		64.236	9.4628	1	3718300			9567	3423	4680	4703	11619;11620	11620					0.008300967085460798
HLLQEELLL	9	Unmodified	_HLLQEELLL_					0	0	0		ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.3244506716728	2	554.324057	1106.63356	1.5423	0.00085492	-0.038528	-2.1357E-05	1.5037	0.00083356	554.3238085152859	63.716	0.30785	63.716	63.524	63.832	0					16	9	2	0	0	0	0.32838	2	26590	26540;26590		24.021	7.3224	1	1379100			9568	5903	4681	4704	11621;11622	11622					0.08450871682907746
HLLQEELLL	9	Unmodified	_HLLQEELLL_					0	0	0		ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.3254882693291	2	554.324057	1106.63356	1.8498	0.0010254	1.0273	0.00056948	2.8771	0.0015948	554.3248770634142	63.146	0.34449	63.476	63.287	63.631	0.32974					25	10	3	0	0	0	0.12251	2	26428	26428;26482		41.84	14.956	1	1169700			9569	5903	4681	4704	11623;11624	11623					0.08450871682907746
HLLQEELLL	9	Unmodified	_HLLQEELLL_					0	0	0		ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3256713747978	2	554.324057	1106.63356	2.807	0.001556	0.29332	0.00016259	3.1003	0.0017186	554.3245719031871	61.896	0.37853	63.313	63.081	63.459	1.4177					28	11	3	0	0	0	0.073578	2	25952	25907;25952		58.679	24.277	1	2577100			9570	5903	4681	4704	11625;11626	11626					0.08450871682907746
HLLQEELLL	9	Unmodified	_HLLQEELLL_					0	0	0		ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3264037966728	2	554.324057	1106.63356	2.0915	0.0011594	0.25857	0.00014333	2.3501	0.0013027	554.3244210088435	61.298	0.37468	63.255	63.058	63.433	1.9571					30	11	4	0	0	0	0.073578	2	25704	25704;25757		58.679	18.721	1	2601900			9571	5903	4681	4704	11627;11628	11627					0.08450871682907746
HLLQSLHLS	9	Unmodified	_HLLQSLHLS_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.7996703982353	2	524.300916	1046.58728	2.3227	0.0012178	-2.5116	-0.0013168	-0.18888	-9.903E-05	524.3003892621765	61.495	0.22527	63.452	63.337	63.562	1.9571					12	6	2	0	0	0	0.094078	1	25800	25800		24.674	1.5255	1	585460	+		9572	10573	4682	4705	11629	11629					0.06584851571483341
HLLRFIKHTYQ	11	Unmodified	_HLLRFIKHTYQ_					0	0	0		nc|ENSG00000133805|Q01432-6|AMPD3;nc|ENSG00000133805|Q01432-3|AMPD3;ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3;ENST00000534047.5_1_11:10503676-10517278:+|nuORF	nc|ENSG00000133805|Q01432-6|AMPD3	nc|ENSG00000133805|Q01432-6|AMPD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	728.9719116091728	2	728.414603	1454.81465	2.5536	0.00186	-4.0692	-0.0029641	-1.5157	-0.001104	728.4134394916066	105.79	0.074135	105.95	105.92	106	0.15859					8	3	3	0	0	0	0.14606	1	45137	45137		1.3295	0	1	14798000			9573	2582	4683	4706	11630	11630					0.10543809779483126
HLLRHLVI	8	Unmodified	_HLLRHLVI_					0	0	0		ENSG00000187792|ENST00000341976|ZNF70	ENSG00000187792|ENST00000341976|ZNF70	ENSG00000187792|ENST00000341976|ZNF70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8251220583916	2	500.824361	999.634169	3.2087	0.001607	-1.2065	-0.00060423	2.0022	0.0010028	500.8239213220121	109	0.20057	109.16	109.05	109.25	0.15898					23	9	3	0	0	0	0.89176	1	47237	47237		0.79363	0	1	45192000			9574	4841	4684	4707	11631	11631					0.13433755913251844
HLLRQDLM	8	Unmodified	_HLLRQDLM_					0	0	0		SFPQ|p.Q531_N533del|1|0.45|ENSG00000116560|chr1:35189198-35189206|GATTTGCCT/-|inframe_deletion	SFPQ|p.Q531_N533del|1|0.45|ENSG00000116560|chr1:35189198-35189206|GATTTGCCT/-|inframe_deletion	SFPQ|p.Q531_N533del|1|0.45|ENSG00000116560|chr1:35189198-35189206|GATTTGCCT/-|inframe_deletion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.7730590701103	2	513.281669	1024.54878	2.1094	0.0010827	-1.3804	-0.00070852	0.72898	0.00037417	513.2812989741414	45.168	0.62877	47.127	46.735	47.364	1.9596					29	19	2	0	0	0	2.3239	1	19011	19011		11.114	4.7604	1	503840			9575	15953	4685	4708	11632	11632					0.03749222665283014
HLLSDELLL	9	Unmodified	_HLLSDELLL_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8043090701103	2	526.802957	1051.59136	3.1814	0.001676	-0.24387	-0.00012847	2.9375	0.0015475	526.8032145599403	64.504	0.36873	65.911	65.77	66.139	1.4071					27	11	3	0	0	0	0.061246	1	27060	27060		63.563	9.9873	1	1813800			9576	494	4686	4709	11633	11633					0.06762896274517516
HLLSDELLL	9	Unmodified	_HLLSDELLL_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8038207888603	2	526.802957	1051.59136	2.9043	0.00153	0.12927	6.8101E-05	3.0336	0.0015981	526.8031306149721	63.976	0.34367	65.904	65.733	66.077	1.928					25	10	3	0	0	0	0.087207	1	26840	26840		53.576	9.1686	1	1695500			9577	494	4686	4709	11634	11634					0.06762896274517516
HLLSDELLL	9	Unmodified	_HLLSDELLL_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	526.802957	1051.59136	1.8652	0.0009826	0.52886	0.0002786	2.3941	0.0012612	526.8036526432402	66.312	0.25902	66.312	66.189	66.448	0	0.25104	0.00053024	NaN	63.563	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	368000			9578	494	4686	4709							0.06762896274517516
HLLSDELLL	9	Unmodified	_HLLSDELLL_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	526.802957	1051.59136	2.0917	0.0011019	0.034384	1.8114E-05	2.1261	0.00112	526.8031145417989	65.791	0.25114	66.117	65.989	66.241	0.32552	0.056044	9.2586E-06	NaN	63.563	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473500			9579	494	4686	4709							0.06762896274517516
HLLTLCCYLEL	11	Unmodified	_HLLTLCCYLEL_					0	0	0		EDA|p.S125Ifs*2|1|0.67|ENSG00000158813|chrX:69616680-69616681|-/A|frameshift_variant;nc|ENSG00000158813|Q92838-2|EDA;nc|ENSG00000158813|Q92838-6|EDA;nc|ENSG00000158813|Q92838-8|EDA;nc|ENSG00000158813|Q92838-5|EDA;ENST00000502251.5_1_X:68836137-68840769:+|nuORF;nc|ENSG00000158813|Q92838-7|EDA;ENST00000374548.5_1_X:68836137-69177014:+|nuORF;nc|ENSG00000158813|Q92838-9|EDA;nc|ENSG00000158813|Q92838-3|EDA;ENSG00000158813|ENST00000374552|EDA	EDA|p.S125Ifs*2|1|0.67|ENSG00000158813|chrX:69616680-69616681|-/A|frameshift_variant	EDA|p.S125Ifs*2|1|0.67|ENSG00000158813|chrX:69616680-69616681|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8423339724541	2	660.838159	1319.66177	3.3456	0.0022109	2.8479	0.001882	6.1936	0.0040929	660.8396075629599	73.793	0.37495	75.111	74.904	75.279	1.318					28	11	3	0	0	0	0.50052	1	30951	30951		24.021	1.2843	1	2143100			9580	439	4687	4710	11635	11635					0.014721102762905502
HLLVALKRY	9	Unmodified	_HLLVALKRY_					0	0	0			REV__ENSG00000115137|ENST00000264711|DNAJC27	REV__ENSG00000115137|ENST00000264711|DNAJC27	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1013976931572	3	371.569476	1111.6866	-0.35716	-0.00013271	2.3371	0.0008684	1.98	0.00073569	371.5702982331203	81.287	0.4287	81.287	81.04	81.469	0					30	13	3	0	0	0	0.11954	1	33753	33753		0.26902	0.033176	1	2532300	+		9581	9426	4688	4711	11636	11636					0.13522294256222267
HLLVALKRY	9	Unmodified	_HLLVALKRY_					0	0	0			REV__ENSG00000115137|ENST00000264711|DNAJC27	REV__ENSG00000115137|ENST00000264711|DNAJC27	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017333865166	3	371.569476	1111.6866	1.8252	0.00067819	1.3424	0.00049881	3.1676	0.001177	371.5698613710679	79.32	0.77869	80.586	80.284	81.063	1.2668					45	24	3	0	0	0	0.11954	1	33242	33242		0.26902	0	1	1159500	+		9582	9426	4688	4711	11637	11637					0.13522294256222267
HLLVLSDPEL	10	Unmodified	_HLLVLSDPEL_					0	0	0		tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3225585818291	2	568.321514	1134.62847	1.9823	0.0011266	0.38929	0.00022124	2.3716	0.0013478	568.3218594992808	69.35	0.31466	71.203	71.041	71.356	1.853					18	9	2	0	0	0	0.80568	1	29088	29088		11.64	1.5664	1	2623700			9583	16472	4689	4712	11638	11638					0.06654567820260127
HLLVSLAMHFR	11	Unmodified	_HLLVSLAMHFR_					0	0	0		PARVB|p.D251Ifs*6|1|0.16|ENSG00000188677|chr22:44147898-44147898|G/-|frameshift_variant;nc|ENSG00000188677|Q9HBI1-3|PARVB;ENSG00000188677|ENST00000338758|PARVB;nc|ENSG00000188677|Q9HBI1-2|PARVB	PARVB|p.D251Ifs*6|1|0.16|ENSG00000188677|chr22:44147898-44147898|G/-|frameshift_variant	PARVB|p.D251Ifs*6|1|0.16|ENSG00000188677|chr22:44147898-44147898|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	662.9321777224541	2	662.371349	1322.72815	2.9755	0.0019709	2.3394	0.0015496	5.3149	0.0035205	662.3722523726475	107.32	0.14868	107.48	107.41	107.56	0.15781					15	7	3	0	0	0	0.14606	1	46093	46093		1.3295	0	1	9185900			9584	4872	4690	4713	11639	11639					0.07969106953214578
HLMDATLLL	9	Unmodified	_HLMDATLLL_					0	0	0		ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7892333865166	2	513.786253	1025.55795	1.9695	0.0010119	1.8183	0.00093422	3.7878	0.0019461	513.7873444283455	66.216	0.32435	66.216	66.025	66.35	0					19	9	3	0	0	0	0.3154	1	27579	27579		24.674	0	1	494860			9585	6573	4691	4714	11640	11640					0.04619571230978181
HLMDATLLL	9	Unmodified	_HLMDATLLL_					0	0	0		ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7883788943291	2	513.786253	1025.55795	3.4296	0.0017621	2.137	0.001098	5.5666	0.00286	513.787145941315	64.427	0.30583	65.834	65.679	65.985	1.4071					18	9	3	0	0	0	0.09539	1	27022	27022		50.855	12.704	1	1405600			9586	6573	4691	4714	11641	11641					0.04619571230978181
HLMDATLLL	9	Unmodified	_HLMDATLLL_					0	0	0		ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7886230349541	2	513.786253	1025.55795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.905	1	65.833	65.333	66.333	1.928								0	0	0	0.046561	1	26812	26812		53.576	17.531	1				9587	6573	4691	4714	11642	11642					0.04619571230978181
HLMDATLLL	9	Unmodified	_HLMDATLLL_					0	0	0		ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	ENST00000444300.1_1_15:89074596-89074887:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	513.786253	1025.55795	2.0801	0.0010687	0.74689	0.00038374	2.8269	0.0014524	513.7867409738936	65.69	0.2823	66.017	65.865	66.147	0.32689	-0.0053568	-0.00084867	NaN	50.855	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	641210			9588	6573	4691	4714							0.04619571230978181
HLMKQLQYET	10	Unmodified	_HLMKQLQYET_					0	0	0			REV__ENST00000508423.1_1_4:6826038-6826173:+|nuORF	REV__ENST00000508423.1_1_4:6826038-6826173:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.662	1	11.752	11.252	12.252	0.089381								0	0	0	0.66141	1	4839	4839		2.086	0	1		+		9589	13552	4692	4715	11643	11643					0.010571113458354375
HLPDAAALLPV	11	Unmodified	_HLPDAAALLPV_					0	0	0		ENST00000292591.11_1_5:179228908-179233794:-|nuORF	ENST00000292591.11_1_5:179228908-179233794:-|nuORF	ENST00000292591.11_1_5:179228908-179233794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.8251220583916	2	558.824224	1115.63389	1.2293	0.00068699	1.7331	0.0009685	2.9625	0.0016555	558.8248093190605	66.154	0.26054	66.154	65.992	66.253	0					13	7	2	0	0	0	0.91768	1	27540	27540		8.7454	1.1365	1	396680			9590	5726	4693	4716	11644	11644					0.08070291402736984
HLPDAAALLPV	11	Unmodified	_HLPDAAALLPV_					0	0	0		ENST00000292591.11_1_5:179228908-179233794:-|nuORF	ENST00000292591.11_1_5:179228908-179233794:-|nuORF	ENST00000292591.11_1_5:179228908-179233794:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	558.824224	1115.63389	1.8587	0.0010387	5.9235	0.0033102	7.7822	0.0043489	559.330694008104	65.585	0.411	65.912	65.674	66.085	0.32689	-0.12105	0.0039642	NaN	8.7454	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845380			9591	5726	4693	4716							0.08070291402736984
HLPKLPPK	8	Unmodified	_HLPKLPPK_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	465.7447082400322	2	465.300188	928.585822	2.5371	0.0011805	-0.3876	-0.00018035	2.1495	0.0010002	465.2998263058565	48.128	0.89314	50.106	49.714	50.607	1.9772					49	28	2	0	0	0	2.3239	1	19997	19997		8.5933	0	1	3400900			9592	1283	4694	4717	11645	11645					0.11867262273369761
HLPKLPPK	8	Unmodified	_HLPKLPPK_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	465.300188	928.585822	2.4074	0.0011201	-0.10123	-4.7103E-05	2.3061	0.001073	465.2999841953194	49.789	1.0363	50.119	49.696	50.732	0.33019	-0.013859	-5.4162E-05	NaN	8.5933	53	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4176400			9593	1283	4694	4717							0.11867262273369761
HLPKLPPK	8	Unmodified	_HLPKLPPK_					0	0	0		nc|ENSG00000100485|Q07890-2|SOS2;ENSG00000100485|ENST00000216373|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	465.300188	928.585822	1.6493	0.00076742	0.3434	0.00015978	1.9927	0.00092721	465.3002094689283	48.786	0.95782	50.174	49.774	50.731	1.388	0.040897	0.00035961	NaN	8.5933	53	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3714900			9594	1283	4694	4717							0.11867262273369761
HLPKMLLLW	9	Unmodified	_HLPKMLLLW_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B;nc|ENSG00000008869|Q9P2D3-2|HEATR5B;HEATR5B|p.A1425Lfs*10|1|0.12|ENSG00000008869|chr2:37013852-37013852|C/-|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8441039919853	2	575.843905	1149.67326	2.4998	0.0014395	-0.0024773	-1.4265E-06	2.4974	0.0014381	575.8437708644321	88.925	0.38797	89.149	88.906	89.294	0.22359					22	11	2	0	0	0	0.84963	1	37302	37302		0.6015	0	1	1035000			9595	535	4695	4718	11646	11646					0.10440720152632821
HLPSALIFL	9	Unmodified	_HLPSALIFL_					0	0	0			REV__ENST00000585554.5_1_19:36235697-36236062:-|nuORF	REV__ENST00000585554.5_1_19:36235697-36236062:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	505.3900329470634	2	505.805303	1009.59605	1.3763	0.00069612	-2.0078	-0.0010155	-0.63152	-0.00031943	505.8049215422508	107.69	0.10744	107.69	107.65	107.75	0					11	5	3	0	0	0	0.11812	1	46247	46247		2.0598	0	1	11774000	+		9596	14025	4696	4719	11647	11647					0.09163825207951959
HLQILTPMKK	10	Unmodified	_HLQILTPMKK_					0	0	0		tr|A0A7D6VNL7|A0A7D6VNL7_9CLOTATP-dependentRecD2DNAhelicaseOS=ClostridiumintestinaleOX=36845GN=recD2PE=3SV=1	tr|A0A7D6VNL7|A0A7D6VNL7_9CLOTATP-dependentRecD2DNAhelicaseOS=ClostridiumintestinaleOX=36845GN=recD2PE=3SV=1	tr|A0A7D6VNL7|A0A7D6VNL7_9CLOTATP-dependentRecD2DNAhelicaseOS=ClostridiumintestinaleOX=36845GN=recD2PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.8643066287041	2	604.862826	1207.7111	2.6264	0.0015886	2.198	0.0013295	4.8244	0.0029181	604.862923369397	97.545	0.15585	97.636	97.559	97.715	0.090881					7	4	2	0	0	0	0.89803	1	40825	40825		1.4819	0.28856	1	2610000			9597	16740	4697	4720	11648	11648					0.11555186347436575
HLQKLRPKL	9	Unmodified	_HLQKLRPKL_					0	0	0		ENST00000602725.5_1_1:32384863-32384938:-|nuORF	ENST00000602725.5_1_1:32384863-32384938:-|nuORF	ENST00000602725.5_1_1:32384863-32384938:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2489807009697	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.614	1	93.759	93.259	94.259	0.14493								0	0	0	0.42693	1	39186	39186		0.23584	0	1				9598	7548	4698	4721	11649	11649					0.16345385521844946
HLRDWLLGWK	10	Unmodified	_HLRDWLLGWK_					0	0	0		ENST00000544583.6_1_17:1003947-1090117:-|nuORF	ENST00000544583.6_1_17:1003947-1090117:-|nuORF	ENST00000544583.6_1_17:1003947-1090117:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	662.3725463747978	2	662.369664	1322.72478	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.852	1	51.243	50.743	51.743	1.3911								0	0	0	0.66031	1	20869	20869		3.9444	0	1				9599	7230	4699	4722	11650	11650					0.07632180170912761
HLRGRLPR	8	Unmodified	_HLRGRLPR_					0	0	0			REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.8152953982353	2	502.814859	1003.61517	2.536	0.0012751	-2.887	-0.0014516	-0.35105	-0.00017652	502.8135007896727	81.37	1.1933	81.661	81.183	82.376	0.29056					105	38	5	0	0	0	0.89176	2	33967	33967;34098		0.79363	0	1	287870000	+		9600	13995	4700	4723	11651;11652	11651					0.11350219342216405
HLRGRLPR	8	Unmodified	_HLRGRLPR_					0	0	0			REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	REV__ENST00000579152.1_1_17:17398683-17399571:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8144103884697	2	502.814859	1003.61517	0.89564	0.00045034	-0.98881	-0.00049719	-0.093173	-4.6849E-05	502.8143264285569	80.232	0.91013	81.948	81.291	82.201	1.7167					92	29	5	0	0	0	0.89176	1	33683	33683		0.79363	0	1	105580000	+		9601	13995	4700	4723	11653	11653					0.11350219342216405
HLRLLVVP	8	Unmodified	_HLRLLVVP_					0	0	0			REV__ENST00000380752.9_1_13:30087987-30088110:-|nuORF	REV__ENST00000380752.9_1_13:30087987-30088110:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2122070193291	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.728	1	84.988	84.488	85.488	0.26083								0	0	0	1.0178	1	35431	35431		0.45834	0	1		+		9602	12763	4701	4724	11654	11654					0.13738951164714308
HLRLNKMIR	9	Unmodified	_HLRLNKMIR_					0	0	0			REV__ENST00000535286.5_2_13:61034553-61034619:+|nuORF	REV__ENST00000535286.5_2_13:61034553-61034619:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2408325076103	3	394.241365	1179.70227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.621	1	79.921	79.421	80.421	0.30047								0	0	0	0.42693	1	33288	33288		1.0715	0.3738	1		+		9603	13742	4702	4725	11655	11655					0.11960257501618798
HLRVYVHLFK	10	Unmodified	_HLRVYVHLFK_					0	0	0		ENST00000328086.11_1_16:25268609-25269107:-|nuORF	ENST00000328086.11_1_16:25268609-25269107:-|nuORF	ENST00000328086.11_1_16:25268609-25269107:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	438.1190063357353	3	437.927663	1310.76116	0.82982	0.0003634	0.91628	0.00040126	1.7461	0.00076466	438.2626536949298	28.09	0.55271	29.865	29.418	29.971	1.7754					21	17	2	0	0	0	0.12561	1	11601	11601		0.15932	0	1	621330			9604	5877	4703	4726	11656	11656					0.11821057067572838
HLSIINEYL	9	Unmodified	_HLSIINEYL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	551.3019286990166	2	551.300581	1100.58661	1.6585	0.00091435	-0.32547	-0.00017943	1.3331	0.00073491	551.300200626028	59.526	0.43991	59.526	59.257	59.697	0					55	18	4	0	0	0	0.0075027	3	24823	24774;24823;24863		112.59	36.31	1	12022000			9605	2927	4704	4727	11657;11658;11659	11658					0.04034012131751297
HLSIINEYL	9	Unmodified	_HLSIINEYL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	551.3020507693291	2	551.300581	1100.58661	2.4403	0.0013454	-0.84744	-0.00046719	1.5929	0.00087817	551.299856767765	58.91	0.42909	59.236	59.023	59.452	0.32553					50	19	4	0	0	0	0.018723	2	24663	24663;24712		100.37	27.546	1	13378000			9606	2927	4704	4727	11660;11661	11660					0.04034012131751297
HLSIINEYL	9	Unmodified	_HLSIINEYL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.3005248904228	2	551.300581	1100.58661	0.27253	0.00015024	0.82111	0.00045268	1.0936	0.00060292	551.3010257642371	57.704	0.88755	59.123	58.465	59.353	1.4181					103	48	4	0	0	0	0.0075027	2	24202	24202;24249		112.59	45.249	1	58166000			9607	2927	4704	4727	11662;11663	11662					0.04034012131751297
HLSIINEYL	9	Unmodified	_HLSIINEYL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	551.3002807497978	2	551.300581	1100.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.943	1	59.361	58.861	59.861	1.4181								0	0	0	0.035377	1	24294	24294		68.081	13.307	1				9608	2927	4704	4727	11664	11664					0.04034012131751297
HLSIINEYL	9	Unmodified	_HLSIINEYL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.3014404177666	2	551.300581	1100.58661	0.54864	0.00030247	0.67288	0.00037096	1.2215	0.00067342	551.3009484126842	57.141	0.95022	59.11	58.394	59.344	1.9684					108	44	3	0	0	0	0.0075027	4	23942	23942;23981;24023;24059		112.59	41.46	1	49188000			9609	2927	4704	4727	11665;11666;11667;11668	11665					0.04034012131751297
HLSNILSEV	9	Unmodified	_HLSNILSEV_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.2801086306572	2	506.277106	1010.53966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.808	1	48.138	47.638	48.638	0.33034								0	0	0	0.24667	1	20052	20052		22.736	3.4793	1				9610	2747	4705	4728	11669	11669					0.03481152580638991
HLSPDGQYVPR	11	Unmodified	_HLSPDGQYVPR_					0	0	0		ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.5514099001884	3	423.550921	1267.63093	0.41365	0.0001752	0.61671	0.00026121	1.0304	0.00043641	423.5513112236767	17.264	0.28553	18.162	18.02	18.305	0.89794					13	9	2	0	0	0	0.90941	1	7192	7192		9.2438	6.2485	1	343520			9611	1572	4706	4729	11670	11670					0.007824162779343169
HLSPDGQYVPR	11	Unmodified	_HLSPDGQYVPR_					0	0	0		ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	ENSG00000106541|ENST00000419304|AGR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.5515319705009	3	423.550921	1267.63093	0.29519	0.00012503	0.62393	0.00026427	0.91912	0.00038929	423.5513598018801	16.93	0.20946	18.232	18.142	18.352	1.3023					9	6	2	0	0	0	0.77014	1	7061	7061		16.275	11.868	1	452590			9612	1572	4706	4729	11671	11671					0.007824162779343169
HLSTVEFLL	9	Unmodified	_HLSTVEFLL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;ENST00000470074.1_1_2:160055548-160076048:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7994262576103	2	529.797675	1057.5808	3.1721	0.0016806	-1.1422	-0.00060514	2.0299	0.0010754	529.7977226246716	64.5	0.27706	65.907	65.77	66.047	1.4071					16	8	2	0	0	0	0.22519	1	27061	27061		30.225	7.0764	1	1689900			9613	1901	4707	4730	11672	11672					0.054309136201027286
HLSTVEFLL	9	Unmodified	_HLSTVEFLL_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant;ENST00000470074.1_1_2:160055548-160076048:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7987548708916	2	529.797675	1057.5808	3.0337	0.0016072	-0.88587	-0.00046933	2.1478	0.0011379	529.7976987778761	63.976	0.31164	65.904	65.733	66.045	1.928					16	9	2	0	0	0	0.046276	1	26839	26839		70.716	38.599	1	1413800			9614	1901	4707	4730	11673	11673					0.054309136201027286
HLTDITLKV	9	Unmodified	_HLTDITLKV_					0	0	0		ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	ENST00000565738.1_1_16:75674022-75675473:-|nuORF	ENST00000565738.1_1_16:75674022-75675473:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3110229372978	2	520.310949	1038.60735	0.33518	0.0001744	0.72748	0.00037851	1.0627	0.00055291	520.3115023835054	36.814	0.2966	38.091	37.873	38.17	1.2762					30	12	3	0	0	0	0.0069936	2	15455	15408;15455		125.53	66.85	1	4817000			9615	787	4708	4731	11674;11675	11675					0.08958602511438585
HLTDITLKV	9	Unmodified	_HLTDITLKV_					0	0	0		ENST00000565738.1_1_16:75674022-75675473:-|nuORF;ENST00000566560.5_1_16:75668010-75682538:-|nuORF;ENSG00000065427|ENST00000302445|KARS1;nc|ENSG00000065427|Q15046-2|KARS1	ENST00000565738.1_1_16:75674022-75675473:-|nuORF	ENST00000565738.1_1_16:75674022-75675473:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3104736208916	2	520.310949	1038.60735	0.78804	0.00041003	-0.46392	-0.00024139	0.32412	0.00016864	520.3108322562791	36.218	0.24599	38.035	37.849	38.095	1.8176					29	13	3	0	0	0	0.013628	2	15184	15142;15184		114.2	56.48	1	4799100			9616	787	4708	4731	11676;11677	11677					0.08958602511438585
HLTEWLQSV	9	Unmodified	_HLTEWLQSV_					0	0	0		ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.7933837771416	2	556.790381	1111.56621	1.4075	0.0007837	3.2051	0.0017846	4.6127	0.0025683	556.7922138759028	53.824	0.22349	53.824	53.712	53.935	0					9	6	2	0	0	0	0.5697	1	22445	22445		12.532	5.2423	1	367870			9617	2779	4709	4732	11678	11678					0.014888414719507637
HLTEWLQSV	9	Unmodified	_HLTEWLQSV_					0	0	0		ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	ENSG00000137628|ENST00000393743|DDX60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.7911254763603	2	556.790381	1111.56621	0.99473	0.00055386	0.66619	0.00037093	1.6609	0.00092478	556.7907171753075	51.971	0.38328	53.367	53.237	53.62	1.3966					16	12	2	0	0	0	0.22154	2	21777	21777;21823		30.637	18.105	1	961160			9618	2779	4709	4732	11679;11680	11679					0.014888414719507637
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.9110290408134	3	435.910227	1304.70885	0.81248	0.00035417	1.4364	0.00062615	2.2489	0.00098031	435.9109855700756	31.1	0.51511	31.1	30.865	31.38	0					46	16	4	0	0	0	0.037135	2	13059	12981;13059		51.765	43.013	1	5571400		+	9619	341	4710	4733	11681;11682	11682					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	653.3629638552666	2	653.361702	1304.70885	1.5934	0.0010411	0.39711	0.00025946	1.9905	0.0013005	653.3620081894421	31.064	1.051	31.064	30.865	31.916	0					96	33	5	0	0	0	1.4234E-06	1	13003	13003		193.01	141.59	1	31342000		+	9620	341	4710	4733	11683	11683					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.9111816287041	3	435.910227	1304.70885	1.5748	0.00068645	0.56661	0.00024699	2.1414	0.00093344	435.91048568889323	30.66	0.38558	30.946	30.79	31.176	0.2859					29	12	3	0	0	0	0.027955	1	12844	12844		59.013	49.249	1	3917400		+	9621	341	4710	4733	11684	11684					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.9109985232353	3	435.910227	1304.70885	1.0738	0.00046806	1.125	0.00049041	2.1988	0.00095848	435.91072059220846	29.475	0.33539	30.758	30.614	30.949	1.2825					18	10	3	0	0	0	0.041084	1	12361	12361		48.073	41.449	1	2455000		+	9622	341	4710	4733	11685	11685					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	653.3622314333916	2	653.361702	1304.70885	0.77679	0.00050752	0.85294	0.00055728	1.6297	0.0010648	653.3622195905625	28.991	0.45539	30.79	30.627	31.082	1.7987					39	14	4	0	0	0	0.00067425	1	12151	12151		173.14	121.72	1	6735300		+	9623	341	4710	4733	11686	11686					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.9112121462822	3	435.910227	1304.70885	0.85694	0.00037355	1.2935	0.00056384	2.1504	0.00093739	435.91075303120357	28.976	0.30206	30.775	30.657	30.959	1.7987					18	9	3	0	0	0	0.11083	1	12181	12181		36.395	30.203	1	1330900		+	9624	341	4710	4733	11687	11687					0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	653.361702	1304.70885	1.0778	0.0007042	0.94233	0.00061568	2.0201	0.0013199	653.3623761908572	30.639	0.91967	30.925	30.735	31.655	0.2859	0.035295	0.00035934	NaN	193.01	68	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13003000		+	9625	341	4710	4733							0.06868429143332833
HLVDEPQNLIK	11	Unmodified	_HLVDEPQNLIK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	653.361702	1304.70885	0.63957	0.00041787	1.0005	0.00065366	1.64	0.0010715	653.3624758400779	29.496	0.48725	30.779	30.585	31.072	1.2825	-0.11056	0.00043531	NaN	193.01	37	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8022100		+	9626	341	4710	4733							0.06868429143332833
HLVHCTLNV	9	Unmodified	_HLVHCTLNV_					0	0	0			REV__ENST00000458670.1_1_20:1755302-1759483:-|nuORF	REV__ENST00000458670.1_1_20:1755302-1759483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.8510009646416	3	345.851655	1034.53313	-2.4759	-0.0008563	-0.2496	-8.6325E-05	-2.7255	-0.00094263	345.85157951877216	14.748	0.90115	14.748	14.503	15.405	0					85	28	4	0	0	0	0.20244	1	6274	6274		32.786	7.3864	1	4894200	+		9627	12964	4711	4734	11688	11688					0.017249361482754466
HLVHWNTK	8	Unmodified	_HLVHWNTK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.5227538943291	3	345.522526	1033.54575	-2.5296	-0.00087404	2.8701	0.00099167	0.34044	0.00011763	345.52362537662907	13.934	0.58417	13.934	13.702	14.286	0					39	18	4	0	0	0	0.065974	1	5767	5767		96.367	54.411	1	20600000			9628	1455	4712	4735	11689	11689					0.03031715602787699
HLVLALPLARV	11	Unmodified	_HLVLALPLARV_					0	0	0			REV__ENSG00000025708|ENST00000252029|TYMP	REV__ENSG00000025708|ENST00000252029|TYMP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2006713747978	4	301.199942	1200.77066	1.0617	0.00031979	2.4482	0.00073739	3.5099	0.0010572	301.20067362691475	46.729	0.67088	47.06	46.562	47.233	0.33034					30	22	2	0	0	0	1.039	1	19487	19487		0.45452	0	1	2296600	+		9629	8568	4713	4736	11690	11690					0.17830825353121327
HLVPEVPTV	9	Unmodified	_HLVPEVPTV_					0	0	0		ENSG00000160685|ENST00000535420|ZBTB7B;nc|ENSG00000160685|O15156-2|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2871276736259	2	495.784567	989.554582	1.5546	0.00077073	1.7095	0.00084756	3.2641	0.0016183	495.78532580765005	44.892	0.37165	44.892	44.656	45.028	0					27	11	3	0	0	0	0.24063	1	18793	18793		28.487	9.0478	1	777240			9630	3567	4714	4737	11691	11691					0.0593864444861083
HLVPEVPTV	9	Unmodified	_HLVPEVPTV_					0	0	0		ENSG00000160685|ENST00000535420|ZBTB7B;nc|ENSG00000160685|O15156-2|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7841674685478	2	495.784567	989.554582	2.413	0.0011963	-1.2177	-0.0006037	1.1953	0.00059262	495.7840909356646	44.296	0.32383	44.623	44.425	44.749	0.32674					17	10	2	0	0	0	0.1735	2	18582	18582;18627		36.044	21.206	1	861620			9631	3567	4714	4737	11692;11693	11692					0.0593864444861083
HLVPEVPTV	9	Unmodified	_HLVPEVPTV_					0	0	0		ENSG00000160685|ENST00000535420|ZBTB7B;nc|ENSG00000160685|O15156-2|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7861205935478	2	495.784567	989.554582	1.601	0.00079377	0.14616	7.2466E-05	1.7472	0.00086623	495.7849362014919	43.051	0.56182	44.397	44.02	44.582	1.3454					38	17	3	0	0	0	0.069258	3	18026	17981;18026;18065		60.39	26.287	1	2471300			9632	3567	4714	4737	11694;11695;11696	11695					0.0593864444861083
HLVPEVPTV	9	Unmodified	_HLVPEVPTV_					0	0	0		ENSG00000160685|ENST00000535420|ZBTB7B;nc|ENSG00000160685|O15156-2|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	ENSG00000160685|ENST00000535420|ZBTB7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7855102419853	2	495.784567	989.554582	1.7117	0.00084862	-0.28108	-0.00013935	1.4306	0.00070927	495.78471075384186	42.419	0.46754	44.34	44.041	44.509	1.9211					30	14	3	0	0	0	0.087207	2	17779	17733;17779		53.576	23.953	1	2849200			9633	3567	4714	4737	11697;11698	11698					0.0593864444861083
HLVRWNDIFLV	11	Unmodified	_HLVRWNDIFLV_					0	0	0			REV__nc|ENSG00000185973|Q9NVH6-7|TMLHE	REV__nc|ENSG00000185973|Q9NVH6-7|TMLHE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	706.9596435427666	2	706.395879	1410.7772	2.6982	0.001906	3.6924	0.0026083	6.3906	0.0045143	706.3981856056739	107.28	0.11215	107.44	107.36	107.47	0.15781					9	5	2	0	0	0	0.14606	1	46051	46051		0.35063	0.35063	1	7415800	+		9634	11486	4715	4738	11699	11699					0.08824718513824337
HLVTSYDLT	9	Unmodified	_HLVTSYDLT_					0	0	0			REV__tr|A0A7D6VQE4|A0A7D6VQE4_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_20465PE=4SV=1	REV__tr|A0A7D6VQE4|A0A7D6VQE4_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_20465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1814147830009	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.561	1	45.89	45.39	46.39	0.32899								0	0	0	0.42693	1	19127	19127		1.1933	0.12188	1		+		9635	15383	4716	4739	11700	11700					0.0018144634370855783
HLWAELVFL	9	Unmodified	_HLWAELVFL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.3176757693291	2	564.316035	1126.61752	1.9408	0.0010952	0.89393	0.00050446	2.8347	0.0015997	564.3164480215605	89.63	1.882	89.63	89.306	91.188	0					129	59	3	0	0	0	0.087207	10	37470	37374;37421;37470;37510;37565;37632;37699;37751;37801;37854		53.576	38.737	1	2404300			9636	851;2954	4717	4740	11701;11702;11703;11704;11705;11706;11707;11708;11709;11710	11703					0.05927210236654901
HLWAELVFL	9	Unmodified	_HLWAELVFL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3186523318291	2	564.316035	1126.61752	2.5223	0.0014233	0.92373	0.00052127	3.446	0.0019446	564.3163443778843	88.925	1.5455	89.149	88.841	90.387	0.22359					117	47	3	0	0	0	0.061246	8	37284	37200;37244;37284;37335;37377;37429;37482;37561		63.563	40.827	1	3415200			9637	851;2954	4717	4740	11711;11712;11713;11714;11715;11716;11717;11718	11713					0.05927210236654901
HLWAELVFL	9	Unmodified	_HLWAELVFL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3201782107353	2	564.316035	1126.61752	5.4049	0.0030501	-0.44896	-0.00025335	4.956	0.0027967	564.3153689083813	87.966	2.0163	89.022	88.576	90.592	1.0562					141	62	3	0	0	0	0.04206	9	37103	37065;37103;37143;37183;37239;37304;37356;37410;37473		74.396	34.439	1	6178700			9638	851;2954	4717	4740	11719;11720;11721;11722;11723;11724;11725;11726;11727	11720					0.05927210236654901
HLWAELVFL	9	Unmodified	_HLWAELVFL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3201782107353	2	564.316035	1126.61752	4.684	0.0026432	0.91208	0.0005147	5.596	0.0031579	564.3164067804694	87.536	1.6851	89.031	88.766	90.451	1.4953					117	52	4	0	0	0	0.04206	11	36905	36811;36858;36905;36945;36985;37027;37080;37146;37199;37263;37339		74.396	45.315	1	6432500			9639	851;2954	4717	4740	11728;11729;11730;11731;11732;11733;11734;11735;11736;11737;11738	11730					0.05927210236654901
HLWIRRNRERN	11	Unmodified	_HLWIRRNRERN_					0	0	0		ENST00000474593.1_1_6:73985278-74020035:-|nuORF;nc|ENSG00000135314|Q4VXA5|KHDC1	ENST00000474593.1_1_6:73985278-74020035:-|nuORF	ENST00000474593.1_1_6:73985278-74020035:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	516.8127929568291	3	517.290546	1548.84981	2.841	0.0014696	1.6543	0.00085574	4.4953	0.0023254	517.6251982072944	93.631	3.6223	93.776	91.872	95.494	0.14493					275	114	4	0	0	0	0.14606	1	38435	38435		0.094841	0	1	2199100			9640	6774	4718	4741	11739	11739					0.09733865359976335
HLWIRRNRERN	11	Unmodified	_HLWIRRNRERN_					0	0	0		ENST00000474593.1_1_6:73985278-74020035:-|nuORF;nc|ENSG00000135314|Q4VXA5|KHDC1	ENST00000474593.1_1_6:73985278-74020035:-|nuORF	ENST00000474593.1_1_6:73985278-74020035:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	517.290546	1548.84981	2.1136	0.0010934	1.4132	0.00073104	3.5269	0.0018244	517.6251819987632	93.733	1.9976	93.733	92.953	94.95	0	-0.021375	-0.00019193	NaN	0.094841	148	63	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1025000			9641	6774	4718	4741							0.09733865359976335
HLWYRLHHE	9	Unmodified	_HLWYRLHHE_					0	0	0			REV__nc|ENSG00000117411|O60909-2|B4GALT2	REV__nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884460330009	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5476	1	7.5476	7.0476	8.0476	0								0	0	0	0.42693	1	3103	3103		0.23584	0.028987	1		+		9642	9501	4719	4742	11740	11740					0.00853863442898728
HLWYRLHHE	9	Unmodified	_HLWYRLHHE_					0	0	0			REV__nc|ENSG00000117411|O60909-2|B4GALT2	REV__nc|ENSG00000117411|O60909-2|B4GALT2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.39	1	14.218	13.718	14.718	0.82789								0	0	0	0.42693	1	5552	5552		0.26902	0	1		+		9643	9501	4719	4742	11741	11741					0.00853863442898728
HLYDIHVTV	9	Unmodified	_HLYDIHVTV_					0	0	0		ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.7930175662041	2	548.792924	1095.57129	2.059	0.0011299	-1.0194	-0.00055944	1.0396	0.0005705	548.792594739104	39.678	0.24461	40.989	40.778	41.023	1.3102					17	8	3	0	0	0	0.00090036	1	16619	16619		133.7	82.847	1	3314600			9644	5233	4720	4743	11742	11742					0.027331453345595946
HLYDIHVTV	9	Unmodified	_HLYDIHVTV_					0	0	0		ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	548.792924	1095.57129	1.4216	0.00078016	-1.5435	-0.00084707	-0.12192	-6.6907E-05	548.7922015075859	39.17	0.21811	41.007	40.848	41.066	1.8366	0.0092632	-0.00023576	NaN	133.7	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2082800			9645	5233	4720	4743							0.027331453345595946
HLYDYTVKL	9	Unmodified	_HLYDYTVKL_					0	0	0		HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant;nc|ENSG00000127946|O00291-3|HIP1;nc|ENSG00000127946|O00291-4|HIP1;ENSG00000127946|ENST00000336926|HIP1	HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3101684451103	2	576.308406	1150.60226	1.717	0.00098953	-0.51291	-0.00029559	1.2041	0.00069394	576.3079906202834	38.644	0.23327	39.94	39.805	40.038	1.2961					13	7	2	0	0	0	0.5697	1	16188	16188		12.532	3.9383	1	1072600			9646	2348	4721	4744	11743	11743					0.032982986488150345
HLYDYTVKL	9	Unmodified	_HLYDYTVKL_					0	0	0		HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant;nc|ENSG00000127946|O00291-3|HIP1;nc|ENSG00000127946|O00291-4|HIP1;ENSG00000127946|ENST00000336926|HIP1	HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	HIP1|p.R940Sfs*47|1|0.08|ENSG00000127946|chr7:75542924-75542925|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3081542849541	2	576.308406	1150.60226	0.9112	0.00052513	-0.3685	-0.00021237	0.54269	0.00031276	576.3082524167894	38.014	0.24131	39.834	39.701	39.942	1.8202					12	7	2	0	0	0	0.10993	1	15958	15958		46.021	24.274	1	1457300			9647	2348	4721	4744	11744	11744					0.032982986488150345
HLYLWGWLH	9	Unmodified	_HLYLWGWLH_					0	0	0		ENST00000457967.1_1_1:113711666-113711915:+|nuORF	ENST00000457967.1_1_1:113711666-113711915:+|nuORF	ENST00000457967.1_1_1:113711666-113711915:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8170043826103	2	612.819276	1223.624	0.60789	0.00037253	-3.027	-0.001855	-2.4191	-0.0014825	612.8174229575279	19.48	0.22232	20.538	20.412	20.634	1.0585					10	6	2	0	0	0	0.39097	1	8117	8117		20.871	2.4981	1	262610			9648	6652	4722	4745	11745	11745					0.021131481880274805
HMGGGSGG	8	Unmodified	_HMGGGSGG_					0	0	0		nc|ENSG00000077150|Q00653-4|NFKB2;ENSG00000077150|ENST00000661543|NFKB2;ENST00000336486.5_1_10:104157832-104159780:+|nuORF;ENST00000467116.5_1_10:104155716-104158713:+|nuORF;nc|ENSG00000077150|Q00653-3|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	658.7869750857353	1	659.256585	658.249308	0.86615	0.00057101	0.68955	0.00045459	1.5557	0.0010256	659.2569886773531	26.7	0.36754	26.962	26.772	27.14	0.26173					14	11	2	0	0	0	2.3239	1	11231	11231		0.69038	0	1	814520			9649	955	4723	4746	11746	11746					-0.09348649896401184
HMKSSSPLS	9	Unmodified	_HMKSSSPLS_					0	0	0			REV__ENSG00000134899|ENST00000652225|ERCC5	REV__ENSG00000134899|ENST00000652225|ERCC5	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2014648318291	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.27	109.77	110.77	0.15228								0	0	0	0.42693	1	47761	47761		1.0715	0.67075	1		+		9650	9922	4724	4747	11747	11747					-0.017470493596420056
HMLDKDKSGFI	11	Unmodified	_HMLDKDKSGFI_					0	0	0		ENSG00000100362|ENST00000417718|PVALB	ENSG00000100362|ENST00000417718|PVALB	ENSG00000100362|ENST00000417718|PVALB	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.846	1	18.825	18.325	19.325	0.97922								0	0	0	0.63775	1	7430	7430		0.50596	0	1				9651	1270	4725	4748	11748	11748					0.010571113458127002
HMLVIINV	8	Unmodified	_HMLVIINV_					0	0	0			REV__ENST00000504235.5_1_19:53926429-53926609:+|nuORF	REV__ENST00000504235.5_1_19:53926429-53926609:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.7795593142509	2	469.778231	937.541908	2.952	0.0013868	0.38407	0.00018043	3.3361	0.0015672	469.7783357274321	75.172	0.48763	76.478	76.28	76.768	1.3063					38	15	3	0	0	0	0.89008	1	31564	31564		2.5775	0	1	7392100	+		9652	13524	4726	4749	11749	11749					0.07063909784733369
HMLVIINV	8	Unmodified	_HMLVIINV_					0	0	0			REV__ENST00000504235.5_1_19:53926429-53926609:+|nuORF	REV__ENST00000504235.5_1_19:53926429-53926609:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	469.778231	937.541908	2.952	0.0013868	0.38407	0.00018043	3.3361	0.0015672	469.7783357274321	75.172	0.48763	76.478	76.28	76.768	1.3063	-0.072913	9.213E-06	NaN	2.5775	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7392100	+		9653	13524	4726	4749							0.07063909784733369
HMSTYVSY	8	Unmodified	_HMSTYVSY_					0	0	0			REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2155334353447	2	494.21566	986.416767	0.12235	6.0466E-05	1.2215	0.00060369	1.3438	0.00066415	494.2163429394539	4.3074	0.34798	4.3074	4.2062	4.5542	0					24	15	2	0	0	0	0.89008	1	1790	1790		2.5775	0.51773	1	537830	+		9654	15722	4727	4750	11750	11750					-0.07698427142304354
HMSTYVSY	8	Unmodified	_HMSTYVSY_					0	0	0			REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2164489626884	2	494.21566	986.416767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8494	1	7.8494	7.3494	8.3494	0								0	0	0	1.0178	1	3227	3227		2.5775	0	1		+		9655	15722	4727	4750	11751	11751					-0.07698427142304354
HMSTYVSY	8	Unmodified	_HMSTYVSY_					0	0	0			REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2152892947197	2	494.21566	986.416767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9491	1	7.9491	7.4491	8.4491	0								0	0	0	1.0178	1	3268	3268		2.5775	0	1		+		9656	15722	4727	4750	11752	11752					-0.07698427142304354
HMSTYVSY	8	Unmodified	_HMSTYVSY_					0	0	0			REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	493.9656860232353	2	494.21566	986.416767	0.12235	6.0466E-05	1.2215	0.00060369	1.3438	0.00066415	494.2163429394539	4.3074	0.34798	4.3074	4.2062	4.5542	0					24	15	2	0	0	0	2.3239	1	1853	1853		2.5775	1.7838	1	537830	+		9657	15722	4727	4750	11753	11753					-0.07698427142304354
HNADDADKQK	10	Unmodified	_HNADDADKQK_					0	0	0		ENST00000570267.2_1_16:89283339-89283555:-|nuORF	ENST00000570267.2_1_16:89283339-89283555:-|nuORF	ENST00000570267.2_1_16:89283339-89283555:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119201540947	3	381.179265	1140.51596	-1.1715	-0.00044655	0.68478	0.00026102	-0.48673	-0.00018553	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.38174	2	9367	9367;9576		23.801	0	1	7559600			9658	7388	4728	4751	11754;11755	11754					-0.048673129238750334
HNGDEIEPFN	10	Unmodified	_HNGDEIEPFN_					0	0	0		tr|A0A553SN01|A0A553SN01_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_23525PE=4SV=1	tr|A0A553SN01|A0A553SN01_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_23525PE=4SV=1	tr|A0A553SN01|A0A553SN01_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_23525PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.171999	1170.49417	-0.79213	-0.00030986	1.3173	0.00051528	0.52515	0.00020542	391.1735076904176	23.709	0.89068	23.709	23.382	24.273	0					45	28	2	0	0	0	0.12549	1	9899	9899		3.5871	0	1	566250			9659	16406	4729	4752	11756	11756					-0.08426117672411237
HNGGSCTD	8	Unmodified	_HNGGSCTD_					0	0	0		ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	MSMS	GG20161007_CRH_Patient100_W632_02	4	395.3195068240166	2	395.642859	789.271166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.259	1	60.228	59.728	60.728	1.969								0	0	0	1.0178	1	24437	24437		0	0	1				9660	3209	4730	4753	11757	11757					-0.13189889938507804
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5114013552666	3	381.17843	1140.51346	-1.5649	-0.0005965	2.0614	0.00078578	0.49656	0.00018928	381.5126641813179	11.436	6.546	11.436	10.986	17.532	0					581	210	4	0	0	0	0.16044	18	4856	4636;4725;4856;4907;4998;5040;5301;5352;5417;5509;5743;6131;6315;6455;6560;6598;6636;6728		53.317	11.004	1	26123000	+		9661	9439	4731	4754	11758;11759;11760;11761;11762;11763;11764;11765;11766;11767;11768;11769;11770;11771;11772;11773;11774;11775	11760					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5118896365166	3	381.17843	1140.51346	-1.1715	-0.00044655	2.8731	0.0010952	1.7016	0.00064861	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.16044	38	6938	6806;6854;6898;6938;7091;7185;7239;7349;7395;7589;7634;7734;7825;8058;8107;8164;8229;8280;8334;8653;8848;9003;9219;9264;9744;9952;10004;10055;10107;10854;11169;11735;12356;12486;12557;12944;13358;13644		46.022	12.954	1	7559600	+		9662	9439	4731	4754	11776;11777;11778;11779;11780;11781;11782;11783;11784;11785;11786;11787;11788;11789;11790;11791;11792;11793;11794;11795;11796;11797;11798;11799;11800;11801;11802;11803;11804;11805;11806;11807;11808;11809;11810;11811;11812;11813	11779					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1806213259697	3	381.17843	1140.51346	-0.51296	-0.00019553	1.1703	0.00044609	0.65733	0.00025056	381.5120625082665	36.936	0.54972	36.936	36.604	37.153	0					58	29	3	0	0	0	0.63205	1	15505	15505		18.721	2.9826	1	2145200	+		9663	9439	4731	4754	11814	11814					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5123168826103	3	381.17843	1140.51346	1.5622	0.00059549	0.72784	0.00027744	2.2901	0.00087293	381.5123003338605	39.382	1.6159	39.694	38.892	40.508	0.31263					99	52	3	0	0	0	0.85604	2	16758	16758;16865		5.7834	0	1	1806400	+		9664	9439	4731	4754	11815;11816	11815					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5121032595634	3	381.17843	1140.51346	1.6908	0.00064451	0.94208	0.0003591	2.6329	0.0010036	381.5120313730317	44.637	1.2143	44.964	44.425	45.639	0.32674					87	40	3	0	0	0	0.82019	2	18946	18847;18946		7.9454	0	1	1639000	+		9665	9439	4731	4754	11817;11818	11818					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5139037966728	3	381.17843	1140.51346	-0.21381	-8.15E-05	0.38256	0.00014583	0.16875	6.4325E-05	381.51186130168713	2.7836	1.0911	3.532	3.1235	4.2146	0.7484					124	67	3	0	0	0	0.8325	3	1200	1086;1146;1200		5.7834	0	1	484800	+		9666	9439	4731	4754	11819;11820;11821	11821					-0.05117439862510764
HNGHLACDFK	10	Unmodified	_HNGHLACDFK_					0	0	0			REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	REV__ENST00000488150.1_1_2:85598540-85598699:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5116149783134	3	381.17843	1140.51346	-0.21381	-8.15E-05	0.38256	0.00014583	0.16875	6.4325E-05	381.51186130168713	2.7836	1.0911	3.532	3.1235	4.2146	0.7484					124	67	3	0	0	0	0.12538	1	1413	1413		5.7834	0	1	484800	+		9667	9439	4731	4754	11822	11822					-0.05117439862510764
HNGILNGKYK	10	Unmodified	_HNGILNGKYK_					0	0	0		ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	ENSG00000174607|ENST00000310836|UGT8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5110046267509	3	381.88049	1142.61964	-0.029352	-1.1209E-05	-0.86777	-0.00033138	-0.89712	-0.00034259	381.8804169961408	19.415	0.18653	20.473	20.353	20.54	1.0585					8	5	2	0	0	0	0.12538	1	8113	8113		5.7834	0.88642	1	241730			9668	4335	4732	4755	11823	11823					0.0540363897446241
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.842987	1172.50713	-1.322	-0.000518	-3.4479	-0.001351	-4.7699	-0.001869	392.1750666247481	9.7972	2.4053	9.7972	8.274	10.679	0					180	95	4	0	0	0	0.12535	1	3603	3603		6.1918	2.6048	1	5122700	+		9669	14248	4733	4756	11824	11824					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.842987	1172.50713	-1.3264	-0.00051973	-1.5271	-0.00059837	-2.8534	-0.0011181	391.8440372313361	8.0074	0.60806	8.0074	7.666	8.274	0					43	25	2	0	0	0	0.12549	1	3266	3266		3.5871	0.85186	1	440850	+		9670	14248	4733	4756	11825	11825					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.842987	1172.50713	-1.3263	-0.0005197	-1.2731	-0.00049886	-2.5994	-0.0010186	391.8440677069002	0.11982	0.25547	0.11982	-0.00030207	0.25517	0					17	12	2	0	0	0	0.12549	1	10	10		3.5871	1.8448	1	362120	+		9671	14248	4733	4756	11826	11826					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.842987	1172.50713	-1.3232	-0.00051848	-3.0356	-0.0011895	-4.3588	-0.0017079	392.1750532119097	0.48248	0.75825	0.48248	0.15354	0.91179	0					64	35	3	0	0	0	0.12535	1	263	263		3.5871	1.8448	1	418400	+		9672	14248	4733	4756	11827	11827					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.842987	1172.50713	-1.3261	-0.00051962	-1.5814	-0.00061968	-2.9075	-0.0011393	391.8438546415968	6.3371	0.58068	6.3371	5.9918	6.5725	0					36	22	2	0	0	0	0.12549	1	2511	2511		3.5871	1.8448	1	340260	+		9673	14248	4733	4756	11828	11828					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.842987	1172.50713	-1.3252	-0.00051926	-2.422	-0.00094905	-3.7472	-0.0014683	392.1752027441046	3.2337	0.67025	3.2337	3.1175	3.7878	0					35	27	2	0	0	0	0.12549	1	1435	1435		3.5871	1.6807	1	297950	+		9674	14248	4733	4756	11829	11829					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.842987	1172.50713	-1.3259	-0.00051953	-1.3894	-0.00054443	-2.7153	-0.001064	392.17523538146094	7.3539	1.0453	7.3539	6.653	7.6982	0					69	43	2	0	0	0	0.12535	1	3066	3066		6.1918	2.6048	1	733010	+		9675	14248	4733	4756	11830	11830					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.842987	1172.50713	-0.69254	-0.00027137	-1.1113	-0.00043545	-1.8038	-0.00070682	391.8434471263506	25.811	1.1066	25.811	25.041	26.148	0					46	35	2	0	0	0	0.12535	1	10891	10891		6.1918	5.3275	1	443250	+		9676	14248	4733	4756	11831	11831					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845641970634	3	391.842987	1172.50713	0.87033	0.00034103	-3.4332	-0.0013453	-2.5629	-0.0010042	391.84281712726164	25.03	0.83151	25.282	24.813	25.645	0.25197					31	26	2	0	0	0	0.12535	1	10287	10287		6.1918	2.6048	1	231820	+		9677	14248	4733	4756	11832	11832					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.842987	1172.50713	0.52091	0.00020411	-3.3333	-0.0013061	-2.8124	-0.001102	391.842646331527	18.488	0.64458	18.661	18.383	19.028	0.17285					29	22	2	0	0	0	0.12535	1	7797	7797		6.1918	1.2948	1	317820	+		9678	14248	4733	4756	11833	11833					-0.07222241769682114
HNGNEKNSHH	10	Unmodified	_HNGNEKNSHH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|21|1|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	391.842987	1172.50713	-0.97206	-0.00038089	-5.9189	-0.0023193	-6.891	-0.0027002	391.8419441786766	6.4659	0.082788	7.0872	7.026	7.1088	0.62127	-0.13337	-0.0044487	NaN	6.1918	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73964	+		9679	14248	4733	4756							-0.07222241769682114
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1806213259697	3	381.181051	1140.52132	-0.48409	-0.00018452	-4.1077	-0.0015658	-4.5918	-0.0017503	381.18122436286313	37.891	1.1732	37.891	37.153	38.326	0					80	44	2	0	0	0	0.047853	6	15740	15602;15688;15740;15815;15868;15951		69.338	53.6	1	2736200			9680	1455	4734	4757	11834;11835;11836;11837;11838;11839	11836					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5133849978447	3	381.181051	1140.52132	-0.16111	-6.1413E-05	-4.0442	-0.0015416	-4.2053	-0.001603	381.512953268708	54.676	1.0262	54.676	54.055	55.081	0					66	34	3	0	0	0	0.30977	1	22834	22834		24.957	19.91	1	1136500			9681	1455	4734	4757	11840	11840					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1810790896416	3	381.181051	1140.52132	-0.2116	-8.0658E-05	1.2055	0.00045952	0.99391	0.00037886	381.1823771160166	56.327	1.2544	56.327	55.999	57.253	0					59	42	2	0	0	0	0.31127	1	23647	23647		24.882	18.251	1	1461300			9682	1455	4734	4757	11841	11841					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1802856326103	3	381.181051	1140.52132	-0.27952	-0.00010655	-2.9079	-0.0011084	-3.1874	-0.001215	381.18136224378526	73.606	1.1876	73.606	73.433	74.621	0					47	36	2	0	0	0	0.72858	1	30696	30696		6.1918	3.4567	1	916190			9683	1455	4734	4757	11842	11842					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1814453005791	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.428	1	13.428	12.928	13.928	0								0	0	0	0.00011312	1	5564	5564		111.31	68.996	1				9684	1455	4734	4757	11843	11843					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1813537478447	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.447	1	15.447	14.947	15.947	0								0	0	0	0.00075648	1	6412	6412		101.54	59.231	1				9685	1455	4734	4757	11844	11844					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1804382205009	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.186	1	34.186	33.686	34.686	0								0	0	0	0.016847	1	14328	14328		91.085	59.047	1				9686	1455	4734	4757	11845	11845					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1805297732353	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.295	1	34.295	33.795	34.795	0								0	0	0	0.076123	1	14376	14376		39.213	26.972	1				9687	1455	4734	4757	11846	11846					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1808044314384	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.556	1	38.556	38.056	39.056	0								0	0	0	0.046358	1	16162	16162		53.317	32.902	1				9688	1455	4734	4757	11847	11847					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1815368533134	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.667	1	38.667	38.167	39.167	0								0	0	0	0.03303	1	16209	16209		69.338	54.09	1				9689	1455	4734	4757	11848	11848					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1805297732353	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.801	1	38.801	38.301	39.301	0								0	0	0	0.026157	1	16266	16266		77.049	50.78	1				9690	1455	4734	4757	11849	11849					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811706423759	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.983	1	38.983	38.483	39.483	0								0	0	0	0.048424	1	16341	16341		61.09	44.941	1				9691	1455	4734	4757	11850	11850					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811401247978	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.243	1	39.243	38.743	39.743	0								0	0	0	0.04174	1	16447	16447		46.022	28.974	1				9692	1455	4734	4757	11851	11851					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1810485720634	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.484	1	39.484	38.984	39.984	0								0	0	0	0.047861	1	16548	16548		55.235	37.792	1				9693	1455	4734	4757	11852	11852					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1812927126884	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.615	1	39.615	39.115	40.115	0								0	0	0	0.026314	1	16603	16603		73.196	56.922	1				9694	1455	4734	4757	11853	11853					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1822692751884	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.991	1	39.991	39.491	40.491	0								0	0	0	0.048424	1	16759	16759		61.09	35.069	1				9695	1455	4734	4757	11854	11854					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1812316775322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.264	1	40.264	39.764	40.764	0								0	0	0	0.043389	1	16870	16870		49.527	27.728	1				9696	1455	4734	4757	11855	11855					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1817199587822	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.41	1	41.41	40.91	41.91	0								0	0	0	0.043389	1	17338	17338		49.527	34.279	1				9697	1455	4734	4757	11856	11856					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1818115115166	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.735	1	41.735	41.235	42.235	0								0	0	0	0.11937	1	17470	17470		32.037	19.863	1				9698	1455	4734	4757	11857	11857					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1812621951103	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.842	1	43.842	43.342	44.342	0								0	0	0	0.10801	1	18349	18349		32.898	17.649	1				9699	1455	4734	4757	11858	11858					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1806213259697	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.095	1	44.095	43.595	44.595	0								0	0	0	0.076123	1	18452	18452		39.213	27.695	1				9700	1455	4734	4757	11859	11859					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1822387576103	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.23	1	44.23	43.73	44.73	0								0	0	0	0.04174	1	18508	18508		46.022	29.748	1				9701	1455	4734	4757	11860	11860					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1819335818291	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.352	1	44.352	43.852	44.852	0								0	0	0	0.094304	1	18559	18559		35.612	22.094	1				9702	1455	4734	4757	11861	11861					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1816894412041	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.539	1	45.539	45.039	46.039	0								0	0	0	0.28924	1	19054	19054		19.626	16.039	1				9703	1455	4734	4757	11862	11862					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1816284060478	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.94	1	47.94	47.44	48.44	0								0	0	0	0.10801	1	20029	20029		32.898	20.67	1				9704	1455	4734	4757	11863	11863					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1808654665947	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.059	1	48.059	47.559	48.559	0								0	0	0	0.04174	1	20077	20077		46.022	29.873	1				9705	1455	4734	4757	11864	11864					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811096072197	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.046	1	51.046	50.546	51.546	0								0	0	0	0.043389	1	21290	21290		49.527	37.353	1				9706	1455	4734	4757	11865	11865					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1826660037041	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.93	1	61.93	61.43	62.43	0								0	0	0	0.36547	1	25820	25820		12.175	9.74	1				9707	1455	4734	4757	11866	11866					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1825439333916	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.713	1	62.713	62.213	63.213	0								0	0	0	0.2321	1	26147	26147		23.801	14.257	1				9708	1455	4734	4757	11867	11867					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1806823611259	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.262	1	66.262	65.762	66.762	0								0	0	0	0.34469	1	27604	27604		14.218	8.0263	1				9709	1455	4734	4757	11868	11868					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1814453005791	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.986	1	67.986	67.486	68.486	0								0	0	0	0.31191	1	28315	28315		17.443	10.812	1				9710	1455	4734	4757	11869	11869					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1822387576103	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.353	1	68.353	67.853	68.853	0								0	0	0	0.32924	1	28466	28466		15.739	10.842	1				9711	1455	4734	4757	11870	11870					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1810485720634	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.518	1	68.518	68.018	69.018	0								0	0	0	0.32083	1	28534	28534		16.566	11.269	1				9712	1455	4734	4757	11871	11871					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1830627322197	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.964	1	68.964	68.464	69.464	0								0	0	0	0.32924	1	28719	28719		15.739	9.5043	1				9713	1455	4734	4757	11872	11872					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811401247978	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.278	1	69.278	68.778	69.778	0								0	0	0	0.32083	1	28851	28851		16.566	11.269	1				9714	1455	4734	4757	11873	11873					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811401247978	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.587	1	69.587	69.087	70.087	0								0	0	0	0.37215	1	28979	28979		11.518	8.4456	1				9715	1455	4734	4757	11874	11874					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5139343142509	3	381.181051	1140.52132	1.6665	0.00063524	-3.8945	-0.0014845	-2.228	-0.00084927	381.51237042835317	47.537	0.98207	47.867	47.512	48.494	0.33034					49	32	2	0	0	0	0.57864	1	19983	19983		12.175	7.2777	1	1426100			9716	1455	4734	4757	11875	11875					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1814453005791	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6344	1	4.7224	4.2224	5.2224	0.08803								0	0	0	0.049973	1	1915	1915		44.392	32.164	1				9717	1455	4734	4757	11876	11876					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1817199587822	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2577	1	5.3457	4.8457	5.8457	0.08803								0	0	0	0.079144	1	2172	2172		38.615	27.815	1				9718	1455	4734	4757	11877	11877					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1814147830009	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.222	1	11.304	10.804	11.804	0.082325								0	0	0	0.00011312	1	4655	4655		111.31	67.537	1				9719	1455	4734	4757	11878	11878					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812316775322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.998	1	15.11	14.61	15.61	0.11295								0	0	0	0.021918	1	6225	6225		88.364	56.326	1				9720	1455	4734	4757	11879	11879					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1816894412041	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.933	1	16.063	15.563	16.563	0.13022								0	0	0	0.00011312	1	6613	6613		111.31	76.377	1				9721	1455	4734	4757	11880	11880					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812927126884	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.15	1	16.28	15.78	16.78	0.13022								0	0	0	0.00075648	1	6704	6704		101.54	69.506	1				9722	1455	4734	4757	11881	11881					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1804382205009	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.17	1	17.321	16.821	17.821	0.15093								0	0	0	0.014767	1	7121	7121		92.201	60.164	1				9723	1455	4734	4757	11882	11882					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812316775322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.288	1	18.461	17.961	18.961	0.17285								0	0	0	0.025902	1	7591	7591		83.278	44.663	1				9724	1455	4734	4757	11883	11883					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812927126884	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.749	1	19.943	19.443	20.443	0.19342								0	0	0	0.014767	1	8206	8206		92.201	68.237	1				9725	1455	4734	4757	11884	11884					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1810180544853	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.236	1	20.446	19.946	20.946	0.21024								0	0	0	0.026217	1	8407	8407		75.571	45.73	1				9726	1455	4734	4757	11885	11885					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1818725466728	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.871	1	22.094	21.594	22.594	0.223								0	0	0	0.0044422	1	9097	9097		97.741	67.9	1				9727	1455	4734	4757	11886	11886					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1808044314384	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.146	1	22.369	21.869	22.869	0.223								0	0	0	0.026249	1	9221	9221		74.772	56.399	1				9728	1455	4734	4757	11887	11887					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812621951103	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.626	1	23.859	23.359	24.359	0.23306								0	0	0	0.025852	1	9852	9852		84.522	59.531	1				9729	1455	4734	4757	11888	11888					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1813232302666	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.24	1	24.483	23.983	24.983	0.24251								0	0	0	0.045104	1	10112	10112		62.869	36.6	1				9730	1455	4734	4757	11889	11889					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1806518435478	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.31	1	25.562	25.062	26.062	0.25197								0	0	0	0.030062	1	10567	10567		70.929	41.088	1				9731	1455	4734	4757	11890	11890					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1810790896416	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.465	1	25.717	25.217	26.217	0.25197								0	0	0	0.050853	1	10632	10632		59.052	30.558	1				9732	1455	4734	4757	11891	11891					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1810180544853	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.757	1	26.009	25.509	26.509	0.25197								0	0	0	0.045104	1	10756	10756		62.869	43.725	1				9733	1455	4734	4757	11892	11892					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1808959841728	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.893	1	26.145	25.645	26.645	0.25197								0	0	0	0.00075648	1	10814	10814		101.54	73.049	1				9734	1455	4734	4757	11893	11893					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1817199587822	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.375	1	26.637	26.137	27.137	0.26173								0	0	0	0.047861	1	11022	11022		55.235	26.74	1				9735	1455	4734	4757	11894	11894					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1813537478447	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.617	1	26.879	26.379	27.379	0.26173								0	0	0	0.016847	1	11127	11127		91.085	56.153	1				9736	1455	4734	4757	11895	11895					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1820861697197	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.893	1	29.172	28.672	29.672	0.2793								0	0	0	0.041982	1	12091	12091		47.732	25.074	1				9737	1455	4734	4757	11896	11896					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1819946169853	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.373	1	29.652	29.152	30.152	0.2793								0	0	0	0.037243	1	12297	12297		67.081	38.586	1				9738	1455	4734	4757	11897	11897					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1817809939384	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.678	1	29.961	29.461	30.461	0.28287								0	0	0	0.041982	1	12427	12427		47.732	34.876	1				9739	1455	4734	4757	11898	11898					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.1812011599541	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.388	1	40.7	40.2	41.2	0.31263								0	0	0	0.32083	1	16979	16979		16.566	11.669	1				9740	1455	4734	4757	11899	11899					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1802551150322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1548	1	7.7819	7.2819	8.2819	0.62713								0	0	0	0.24774	1	2960	2960		22.658	17.361	1				9741	1455	4734	4757	11900	11900					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1801635622978	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5028	1	9.1393	8.6393	9.6393	0.63651								0	0	0	0.38605	1	3527	3527		10.151	6.2742	1				9742	1455	4734	4757	11901	11901					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1808654665947	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8669	1	10.518	10.018	11.018	0.65058								0	0	0	1.5412E-17	1	4103	4103		146.68	91.177	1				9743	1455	4734	4757	11902	11902					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1812927126884	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.118	1	19.098	18.598	19.598	0.97922								0	0	0	0.043389	1	7543	7543		49.527	38.033	1				9744	1455	4734	4757	11903	11903					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1807739138603	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.989	1	20.048	19.548	20.548	1.0585								0	0	0	0.04944	1	7913	7913		57.249	42.001	1				9745	1455	4734	4757	11904	11904					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1816894412041	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.12	1	20.178	19.678	20.678	1.0585								0	0	0	0.10525	1	7966	7966		33.445	23.294	1				9746	1455	4734	4757	11905	11905					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1821472048759	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.749	1	20.807	20.307	21.307	1.0585								0	0	0	0.044869	1	8224	8224		51.415	35.266	1				9747	1455	4734	4757	11906	11906					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1822387576103	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.877	1	20.935	20.435	21.435	1.0585								0	0	0	0.041982	1	8276	8276		47.732	31.457	1				9748	1455	4734	4757	11907	11907					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1811096072197	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.218	1	22.344	21.844	22.844	1.1254								0	0	0	0.079144	1	8857	8857		38.615	30.459	1				9749	1455	4734	4757	11908	11908					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1813232302666	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.345	1	25.586	25.086	26.086	1.241								0	0	0	0.13763	1	10181	10181		30.703	10.289	1				9750	1455	4734	4757	11909	11909					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1808959841728	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.882	1	26.124	25.624	26.624	1.241								0	0	0	0.04174	1	10412	10412		46.022	32.407	1				9751	1455	4734	4757	11910	11910					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.1796142458916	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.735	1	26.994	26.494	27.494	1.2594								0	0	0	0.26235	1	10778	10778		21.59	14.553	1				9752	1455	4734	4757	11911	11911					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1804382205009	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6939	1	10.438	9.9385	10.938	0.74462								0	0	0	7.1464E-26	1	4036	4036		154.04	113.8	1				9753	1455	4734	4757	11912	11912					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1827575564384	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.429	1	11.174	10.674	11.674	0.74462								0	0	0	0.068489	1	4338	4338		40.725	29.207	1				9754	1455	4734	4757	11913	11913					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1930419802666	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.975	1	12.763	12.263	13.263	0.78751								0	0	0	0.052043	1	4972	4972		43.982	28.243	1				9755	1455	4734	4757	11914	11914					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1808349490166	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.47	1	13.258	12.758	13.758	0.78751								0	0	0	0.0511	1	5175	5175		59.368	47.874	1				9756	1455	4734	4757	11915	11915					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1822082400322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.154	1	13.982	13.482	14.482	0.82789								0	0	0	0.049973	1	5453	5453		44.392	28.117	1				9757	1455	4734	4757	11916	11916					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1805297732353	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.655	1	14.483	13.983	14.983	0.82789								0	0	0	0.068489	1	5662	5662		40.725	29.207	1				9758	1455	4734	4757	11917	11917					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1808959841728	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.853	1	16.892	16.392	17.392	1.0392								0	0	0	0.052043	1	6579	6579		43.982	36.036	1				9759	1455	4734	4757	11918	11918					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1812316775322	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.262	1	17.302	16.802	17.802	1.0392								0	0	0	0.043389	1	6752	6752		49.527	35.122	1				9760	1455	4734	4757	11919	11919					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1810790896416	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.059	1	18.361	17.861	18.861	1.3023								0	0	0	0.27617	1	7087	7087		20.581	15.684	1				9761	1455	4734	4757	11920	11920					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1811401247978	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.622	1	20.07	19.57	20.57	1.448								0	0	0	0.041982	1	7744	7744		47.732	32.483	1				9762	1455	4734	4757	11921	11921					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1839172244072	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.896	1	22.471	21.971	22.971	1.5748								0	0	0	0.26235	1	8703	8703		21.59	15.398	1				9763	1455	4734	4757	11922	11922					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1804687380791	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.286	1	24.937	24.437	25.437	1.6511								0	0	0	0.31191	1	9724	9724		17.443	9.2871	1				9764	1455	4734	4757	11923	11923					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1815368533134	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.347	1	26.031	25.531	26.531	1.6845								0	0	0	0.2321	1	10169	10169		23.801	13.002	1				9765	1455	4734	4757	11924	11924					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1796447634697	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.161	1	26.878	26.378	27.378	1.7167								0	0	0	0.35837	1	10518	10518		12.873	9.553	1				9766	1455	4734	4757	11925	11925					-0.043315445507460026
HNGPEHWHK	9	Unmodified	_HNGPEHWHK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	381.181051	1140.52132	2.0101	0.00076622	1.5049	0.00057363	3.515	0.0013398	381.1829348640372	55.694	0.65446	56.015	55.485	56.139	0.32088	-0.15638	0.00027785	NaN	24.882	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	724710			9767	1455	4734	4757							-0.043315445507460026
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8427612185478	3	456.843843	1367.5097	0.52396	0.00023937	-2.3924	-0.0010929	-1.8684	-0.00085357	456.8429189418258	0.97899	1.921	0.97899	-0.00030207	1.9207	0					192	92	3	0	0	0	0.94603	8	293	199;244;293;333;416;458;598;649		7.0371	4.6023	1	2148100	+		9768	13242	4735	4758	11926;11927;11928;11929;11930;11931;11932;11933	11928					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8428527712822	3	456.843843	1367.5097	0.52279	0.00023883	-3.3576	-0.0015339	-2.8348	-0.0012951	456.842278113981	4.5355	0.65651	4.5355	4.1439	4.8004	0					53	28	3	0	0	0	0.9945	3	1919	1828;1919;1962		4.1166	1.2733	1	1469200	+		9769	13242	4735	4758	11934;11935;11936	11935					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8840209841728	4	342.884701	1367.5097	-2.7314	-0.00093655	-0.49201	-0.0001687	-3.2234	-0.0011053	342.88482318624057	10.043	0.91497	10.043	9.5802	10.495	0					39	29	3	0	0	0	0.94603	2	4073	4073;4143		7.0371	4.4058	1	1666000	+		9770	13242	4735	4758	11937;11938	11937					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8835937380791	4	342.884701	1367.5097	-2.7328	-0.00093702	0.77136	0.00026449	-1.9614	-0.00067253	342.8851748939738	10.417	0.65038	10.417	10.182	10.833	0					27	20	2	0	0	0	0.98969	2	4200	4200;4278		4.4062	3.1913	1	936110	+		9771	13242	4735	4758	11939;11940	11939					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8431274294853	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.057225	1	0.057225	-0.44278	0.55722	0								0	0	0	0.63775	1	23	23		2.6312	0.72486	1		+		9772	13242	4735	4758	11941	11941					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8441955447197	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.15496	1	0.15496	-0.34504	0.65496	0								0	0	0	0.63775	1	63	63		4.7159	1.8726	1		+		9773	13242	4735	4758	11942	11942					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8427917361259	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.26374	1	0.26374	-0.23626	0.76374	0								0	0	0	0.63775	1	108	108		3.8459	2.5163	1		+		9774	13242	4735	4758	11943	11943					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8432494997978	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8141	1	1.8141	1.3141	2.3141	0								0	0	0	0.63775	1	744	744		2.4348	1.1051	1		+		9775	13242	4735	4758	11944	11944					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8426391482353	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9319	1	1.9319	1.4319	2.4319	0								0	0	0	0.63775	1	792	792		4.4062	1.5629	1		+		9776	13242	4735	4758	11945	11945					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8418456912041	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0157	1	5.0157	4.5157	5.5157	0								0	0	0	0.63775	1	2060	2060		2.4348	0.52841	1		+		9777	13242	4735	4758	11946	11946					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8420898318291	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.575	1	5.575	5.075	6.075	0								0	0	0	0.63775	1	2289	2289		2.4348	0.97967	1		+		9778	13242	4735	4758	11947	11947					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8428832888603	3	456.843843	1367.5097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9148	1	5.9148	5.4148	6.4148	0								0	0	0	0.63775	1	2431	2431		2.6312	0.72486	1		+		9779	13242	4735	4758	11948	11948					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.8838378787041	4	342.884701	1367.5097	-2.7314	-0.00093655	-0.49201	-0.0001687	-3.2234	-0.0011053	342.88482318624057	10.043	0.91497	10.043	9.5802	10.495	0					39	29	3	0	0	0	0.14606	1	4278	4278		4.4062	3.1913	1	1666000	+		9780	13242	4735	4758	11949	11949					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	456.5092651247978	3	456.843843	1367.5097	0.58188	0.00026583	-1.0942	-0.00049989	-0.51234	-0.00023406	456.8430355135377	12.718	0.30791	12.718	12.622	12.93	0					14	9	2	0	0	0	0.14606	1	5256	5256		1.2148	0.10508	1	705200	+		9781	13242	4735	4758	11950	11950					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8844177126884	4	342.884701	1367.5097	-0.32378	-0.00011102	-0.96281	-0.00033013	-1.2866	-0.00044115	342.88441726314596	9.8914	0.51636	9.9694	9.7678	10.284	0.077971					21	16	2	0	0	0	0.98969	1	4082	4082		4.4062	3.0765	1	316480	+		9782	13242	4735	4758	11951	11951					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.8414184451103	3	456.843843	1367.5097	0.73746	0.00033691	-3.0242	-0.0013816	-2.2868	-0.0010447	456.84210629117496	11.499	1.705	11.581	10.658	12.363	0.082325					103	55	3	0	0	0	0.98969	1	4664	4664		4.4062	3.0765	1	1053400	+		9783	13242	4735	4758	11952	11952					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.8417236208916	3	456.843843	1367.5097	0.27804	0.00012702	-3.6624	-0.0016732	-3.3844	-0.0015461	456.84198364917427	9.8384	0.59873	10.583	10.257	10.856	0.74462					38	20	3	0	0	0	0.99899	1	4148	4148		3.8459	2.5163	1	718080	+		9784	13242	4735	4758	11953	11953					-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	342.884701	1367.5097	-2.7328	-0.00093702	0.77136	0.00026449	-1.9614	-0.00067253	342.8851748939738	10.417	0.65038	10.417	10.182	10.833	0	-0.058081	0.0010467	NaN	4.4062	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	936110	+		9785	13242	4735	4758							-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	456.843843	1367.5097	-0.0047122	-2.1527E-06	-6.7951	-0.0031043	-6.7998	-0.0031065	457.17521380252157	12.333	0.094504	13.027	12.948	13.042	0.69396	0.15454	-0.004169	NaN	1.2148	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104710	+		9786	13242	4735	4758							-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	342.884701	1367.5097	-1.6349	-0.00056059	-1.0672	-0.00036594	-2.7021	-0.00092652	342.8842050837314	9.8829	0.54675	10.534	10.283	10.83	0.65058	0.058081	-0.001475	NaN	4.4062	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316170	+		9787	13242	4735	4758							-0.15935613742908572
HNGSYYCCYMK	11	Unmodified	_HNGSYYCCYMK_					0	0	0			REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	REV__ENST00000466872.2_1_9:72435815-72501795:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	456.843843	1367.5097	0.27804	0.00012702	-3.6624	-0.0016732	-3.3844	-0.0015461	456.84198364917427	9.8384	0.59873	10.583	10.257	10.856	0.74462	-0.045987	0.00011367	NaN	3.8459	38	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718080	+		9788	13242	4735	4758							-0.15935613742908572
HNIIREFEI	9	Unmodified	_HNIIREFEI_					0	0	0			REV__tr|A0A7D7A1C8|A0A7D7A1C8_9CLOTASCHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11930PE=4SV=1	REV__tr|A0A7D7A1C8|A0A7D7A1C8_9CLOTASCHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11930PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	390.880379	1169.61931	1.1434	0.00044694	-0.12549	-4.905E-05	1.0179	0.00039789	390.880228475337	30.122	0.64522	30.407	30.175	30.82	0.2859					28	21	2	0	0	0	0.11901	1	12556	12556		1.0715	0	1	1444700	+		9789	15822	4736	4759	11954	11954					0.04128219254607757
HNKFRYSCS	9	Unmodified	_HNKFRYSCS_					0	0	0			REV__ENST00000512381.1_1_6:41978777-42016405:-|nuORF	REV__ENST00000512381.1_1_6:41978777-42016405:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5122863650322	3	381.17843	1140.51346	-1.1715	-0.00044655	2.8731	0.0010952	1.7016	0.00064861	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.15635	1	8550	8550		28.495	0	1	7559600	+		9790	13580	4737	4760	11955	11955					-0.05117439862488027
HNLQEEMHH	9	Unmodified	_HNLQEEMHH_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1;GOLGB1|p.R1008Efs*9|1|0.15|ENSG00000173230|chr3:121697486-121697486|T/-|frameshift_variant	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	392.2874633669853	3	392.173456	1173.49854	0.15154	5.9429E-05	1.1084	0.00043467	1.2599	0.00049409	392.17455898763103	9.236	0.35495	9.314	9.0399	9.3949	0.077971					42	26	3	0	0	0	0.11941	1	3732	3732		1.0715	0	1	264200			9791	4276	4738	4761	11956	11956					-0.08126931730498654
HNMAEPFVLE	10	Unmodified	_HNMAEPFVLE_					0	0	0			REV__ENSG00000135638|ENST00000258106|EMX1	REV__ENSG00000135638|ENST00000258106|EMX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.7802001833916	2	593.781699	1185.54884	2.5233	0.0014983	-0.65901	-0.00039131	1.8643	0.001107	593.7807968433186	44.403	1.1439	45.768	45.419	46.563	1.3653					89	35	4	0	0	0	0.40874	1	18680	18680		32.786	7.3864	1	3001500	+		9792	9949	4739	4762	11957	11957					-0.036508221253598094
HNMPMSYYK	9	Unmodified	_HNMPMSYYK_					0	0	0		tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	390.840538	1169.49979	0.92987	0.00036343	2.8897	0.0011294	3.8196	0.0014928	391.17559921297936	26.289	0.35726	26.55	26.324	26.681	0.26173					15	11	2	0	0	0	0.11837	1	10978	10978		0.96228	0	1	256220			9793	16917	4740	4763	11958	11958					-0.07818433685974924
HNPLFPALHK	10	Unmodified	_HNPLFPALHK_					0	0	0			REV__ENSG00000178445|ENST00000321612|GLDC	REV__ENSG00000178445|ENST00000321612|GLDC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2848998904228	3	391.889097	1172.64546	0.52023	0.00020387	0.27815	0.00010901	0.79839	0.00031288	392.2233955540726	27.409	0.30877	28.688	28.473	28.782	1.2789					13	9	2	0	0	0	0.12551	1	11483	11483		1.5923	0.63001	1	371060	+		9794	11247	4741	4764	11959	11959					0.06604533216750497
HNQNLMEEK	9	Unmodified	_HNQNLMEEK_					0	0	0			REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5132629275322	3	381.513479	1141.51861	-0.75121	-0.0002866	-2.4514	-0.00093523	-3.2026	-0.0012218	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.42097	1	13570	13570		19.362	0.98885	1	2428000	+		9795	13150	4742	4765	11960	11960					-0.04649180790556784
HNQNLMEEK	9	Unmodified	_HNQNLMEEK_					0	0	0			REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5121032595634	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.213	1	43.213	42.713	43.713	0								0	0	0	0.37238	1	18091	18091		11.495	1.9507	1		+		9796	13150	4742	4765	11961	11961					-0.04649180790556784
HNQNLMEEK	9	Unmodified	_HNQNLMEEK_					0	0	0			REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5115844607353	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.154	1	45.154	44.654	45.654	0								0	0	0	0.37238	1	18895	18895		11.495	3.3392	1		+		9797	13150	4742	4765	11962	11962					-0.04649180790556784
HNQNLMEEK	9	Unmodified	_HNQNLMEEK_					0	0	0			REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	REV__ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5114623904228	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.969	1	48.969	48.469	49.469	0								0	0	0	0.37238	1	20446	20446		11.495	1.9507	1		+		9798	13150	4742	4765	11963	11963					-0.04649180790556784
HNQPEEDFTS	10	Unmodified	_HNQPEEDFTS_					0	0	0			REV__tr|A0A7D6VNU9|A0A7D6VNU9_9CLOTTranscriptionterminationfactorRhoOS=ClostridiumintestinaleOX=36845GN=rhoPE=3SV=1	REV__tr|A0A7D6VNU9|A0A7D6VNU9_9CLOTTranscriptionterminationfactorRhoOS=ClostridiumintestinaleOX=36845GN=rhoPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.2536498904228	2	602.249274	1202.484	4.127	0.0024855	2.2392	0.0013485	6.3661	0.003834	602.2505867698017	94.825	0.44669	95.566	95.325	95.771	0.74124					63	14	6	0	0	0	0.84303	1	39894	39894		7.609	0.50723	1	12260000	+		9799	15341	4743	4766	11964	11964					-0.10914725397651637
HNQRLVFLF	9	Unmodified	_HNQRLVFLF_					0	0	0			REV__ENST00000306801.7_1_17:78939591-78939999:+|nuORF	REV__ENST00000306801.7_1_17:78939591-78939999:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2840759158134	3	391.889097	1172.64546	0.49953	0.00019576	0.62484	0.00024487	1.1244	0.00044063	391.88882503062354	26.874	0.45852	28.621	28.468	28.926	1.747					22	14	2	0	0	0	0.11901	1	11215	11215		2.7352	1.5419	1	320300	+		9800	12343	4744	4767	11965	11965					0.06604533216750497
HNSSRAPVFL	10	Unmodified	_HNSSRAPVFL_					0	0	0		nc|ENSG00000182087|Q4ZIN3-2|TMEM259;ENSG00000182087|ENST00000356663|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	nc|ENSG00000182087|Q4ZIN3-2|TMEM259	MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3000366091728	2	564.301447	1126.58834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.213	1	91.404	90.904	91.904	0.19042								0	0	0	0.66008	1	38210	38210		4.3292	0.38484	1				9801	4594	4745	4768	11966	11966					0.030110659403817408
HNTDDSDDF	9	Unmodified	_HNTDDSDDF_					0	0	0		nc|ENSG00000088970|Q2M2Z5-5|KIZ;nc|ENSG00000088970|Q2M2Z5-2|KIZ;ENSG00000088970|ENST00000619189|KIZ	nc|ENSG00000088970|Q2M2Z5-5|KIZ	nc|ENSG00000088970|Q2M2Z5-5|KIZ	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1916381716728	2	533.191425	1064.3683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.087	1	40.924	40.424	41.424	1.8366								0	0	0	0.42693	1	16387	16387		1.8442	1.0506	1				9802	1113	4746	4769	11967	11967					-0.16131249248519453
HNWHNHGNK	9	Unmodified	_HNWHNHGNK_					0	0	0		sp|P16721|UL11P_HCMVAProteinUL11OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL11PE=2SV=1	sp|P16721|UL11P_HCMVAProteinUL11OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL11PE=2SV=1	sp|P16721|UL11P_HCMVAProteinUL11OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL11PE=2SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5089294314384	3	381.844551	1142.51182	-1.1472	-0.00043804	-0.23803	-9.0891E-05	-1.3852	-0.00052893	381.84450710689697	0.37075	0.51058	1.0381	0.66714	1.1777	0.66738					42	26	3	0	0	0	0.11539	1	72	72		12.241	1.4167	1	475840			9803	15992	4747	4770	11968	11968					-0.05373312836240984
HNWYKRMRRLK	11	Unmodified	_HNWYKRMRRLK_					0	0	0			REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.9658691287041	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.767	1	32.058	31.558	32.558	0.29086								0	0	0	0.63775	1	13334	13334		0.45452	0	1		+		9804	13351	4748	4771	11969	11969					0.10289168153053652
HNWYKRMRRLK	11	Unmodified	_HNWYKRMRRLK_					0	0	0			REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.9645873904228	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.183	1	32.477	31.977	32.977	0.29431								0	0	0	0.63775	1	13507	13507		0.45452	0	1		+		9805	13351	4748	4771	11970	11970					0.10289168153053652
HNWYKRMRRLK	11	Unmodified	_HNWYKRMRRLK_					0	0	0			REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.9656249880791	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.327	1	32.621	32.121	33.121	0.29431								0	0	0	0.63775	1	13568	13568		0.45452	0	1		+		9806	13351	4748	4771	11971	11971					0.10289168153053652
HPAASVGW	8	Unmodified	_HPAASVGW_					0	0	0			REV__ENST00000428931.5_1_1:154242855-154243155:+|nuORF	REV__ENST00000428931.5_1_1:154242855-154243155:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	824.4098388552666	1	824.404963	823.397687	2.8413	0.0023424	1.8929	0.0015605	4.7341	0.0039028	824.4073601576168	104.82	0.09201	104.98	104.91	105.01	0.15859					13	4	4	0	0	0	0.89178	1	44516	44516		0.69038	0	1	31853000	+		9807	13014	4749	4772	11972	11972					-0.021075956510458127
HPACSTDS	8	Unmodified	_HPACSTDS_					0	0	0		ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.1590759158134	2	409.160885	816.307217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.14	1	108.14	107.64	108.64	0								0	0	0	1.0178	1	46538	46538		2.5775	0	1				9808	5219	4750	4773	11973	11973					-0.10828432761638851
HPACSTDS	8	Unmodified	_HPACSTDS_					0	0	0		ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	MSMS	GG20161007_CRH_Patient100_W632_01	3	409.1615173220634	2	409.160885	816.307217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.98	1	105.14	104.64	105.64	0.15859								0	0	0	1.0178	1	44621	44621		2.5775	0	1				9809	5219	4750	4773	11974	11974					-0.10828432761638851
HPACSTDS	8	Unmodified	_HPACSTDS_					0	0	0		ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	ENSG00000213462|ENST00000394323|ERV3-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	409.1615478396416	2	409.160885	816.307217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.95	1	105.12	104.62	105.62	0.16679								0	0	0	1.0178	1	44539	44539		2.5775	0	1				9810	5219	4750	4773	11975	11975					-0.10828432761638851
HPADMQLVL	9	Unmodified	_HPADMQLVL_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2676269412041	2	512.268227	1022.5219	2.5173	0.0012895	-2.582	-0.0013227	-0.064664	-3.3125E-05	512.2661833342327	43.614	0.40113	45.558	45.398	45.799	1.9438					24	12	3	0	0	0	0.39927	1	18325	18325		20.454	2.3186	1	1258500			9811	5028	4751	4774	11976	11976					0.011541140541226014
HPALAIPEL	9	Unmodified	_HPALAIPEL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7796813845634	2	480.779285	959.544017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.852	1	57.261	56.761	57.761	1.4099								0	0	0	0.037328	1	23405	23405		67.035	30.991	1				9812	1284	4752	4775	11977	11977					0.06262661794164615
HPALAIPEL	9	Unmodified	_HPALAIPEL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7794067263603	2	480.779285	959.544017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.982	1	57.391	56.891	57.891	1.4099								0	0	0	0.037328	1	23460	23460		67.035	30.991	1				9813	1284	4752	4775	11978	11978					0.06262661794164615
HPALAIPEL	9	Unmodified	_HPALAIPEL_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7788268923759	2	480.779285	959.544017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.404	1	57.372	56.872	57.872	1.9684								0	0	0	0.043809	1	23232	23232		63.563	27.519	1				9814	1284	4752	4775	11979	11979					0.06262661794164615
HPALSIPEL	9	Unmodified	_HPALSIPEL_					0	0	0		ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.7761108279228	2	488.776742	975.538931	1.7319	0.00084654	-1.0318	-0.00050431	0.70016	0.00034222	488.7762966379538	54.658	0.62653	56.063	55.613	56.24	1.4048					35	19	2	0	0	0	0.069258	2	22825	22825;22875		60.39	17.531	1	2611700			9815	1316	4753	4776	11980;11981	11980					0.05018357931567152
HPALSIPEL	9	Unmodified	_HPALSIPEL_					0	0	0		ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	ENSG00000100994|ENST00000216962|PYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7766906619072	2	488.776742	975.538931	1.7412	0.00085107	-1.1701	-0.00057192	0.57112	0.00027915	488.77637364116947	54.133	0.53615	56.102	55.751	56.287	1.9684					30	16	2	0	0	0	0.069258	2	22677	22677;22728		60.39	15.983	1	1971500			9816	1316	4753	4776	11982;11983	11982					0.05018357931567152
HPARKERR	8	Unmodified	_HPARKERR_					0	0	0		ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant;ENSG00000031081|ENST00000264245|ARHGAP31	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3057739138603	2	525.307398	1048.60024	2.5546	0.0013419	-2.2279	-0.0011704	0.32662	0.00017158	525.3059040956764	84.322	0.37427	84.322	84.151	84.526	0					31	11	3	0	0	0	0.89008	1	35215	35215		2.5775	0	1	5548800			9817	73	4754	4777	11984	11984					0.07788727474212465
HPARKERR	8	Unmodified	_HPARKERR_					0	0	0		ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant;ENSG00000031081|ENST00000264245|ARHGAP31	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3056518435478	2	525.307398	1048.60024	2.6448	0.0013893	-1.4728	-0.0007737	1.1719	0.00061563	525.3063396038295	84.16	0.4451	84.421	84.248	84.693	0.26083					38	13	4	0	0	0	0.89008	1	35187	35187		2.5775	0	1	4336200			9818	73	4754	4777	11985	11985					0.07788727474212465
HPARKERR	8	Unmodified	_HPARKERR_					0	0	0		ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant;ENSG00000031081|ENST00000264245|ARHGAP31	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	ARHGAP31|p.R842Efs*4|1|0.05|ENSG00000031081|chr3:119414452-119414453|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3083984255791	2	525.307398	1048.60024	1.8799	0.00098751	-1.3856	-0.00072784	0.49432	0.00025967	525.3065054852538	83.285	0.4106	84.923	84.726	85.136	1.6379					31	12	3	0	0	0	0.88958	1	34966	34966		2.8892	0	1	4621600			9819	73	4754	4777	11986	11986					0.07788727474212465
HPARPGKA	8	Unmodified	_HPARPGKA_					0	0	0			REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.2396118044853	2	417.240661	832.46677	1.2295	0.000513	-3.4008	-0.001419	-2.1713	-0.00090595	417.238873843555	68.957	0.6408	70.81	70.558	71.199	1.853					45	20	3	0	0	0	0.89008	1	28902	28902		2.5775	0	1	6016300	+		9820	8823	4755	4778	11987	11987					0.043834883685121895
HPATVFILF	9	Unmodified	_HPATVFILF_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7986938357353	2	522.797478	1043.5804	2.6077	0.0013633	0.69671	0.00036424	3.3044	0.0017275	522.7976100602843	76.149	0.79247	77.443	77.16	77.952	1.2938					73	25	4	0	0	0	0.033521	3	31922	31922;31969;32024		81.864	21.474	1	8251000			9821	1799	4756	4779	11988;11989;11990	11988					0.060355386908895525
HPATVFILF	9	Unmodified	_HPATVFILF_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7985717654228	2	522.797478	1043.5804	2.692	0.0014074	-0.041461	-2.1676E-05	2.6506	0.0013857	522.7973327711823	75.581	0.75594	77.362	77.103	77.859	1.7817					62	24	3	0	0	0	0.033521	2	31657	31657;31707		81.864	21.474	1	10217000			9822	1799	4756	4779	11991;11992	11991					0.060355386908895525
HPAVVFSVQL	10	Unmodified	_HPAVVFSVQL_					0	0	0		ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.8121826052666	2	548.811116	1095.60768	2.0599	0.0011305	1.0716	0.00058809	3.1315	0.0017186	548.8114176510616	39.856	0.36966	41.166	40.991	41.361	1.3102					26	11	3	0	0	0	0.049285	1	16719	16719		86.332	0	1	7248100			9823	5362	4757	4780	11993	11993					0.0637002223129457
HPAVVFSVQL	10	Unmodified	_HPAVVFSVQL_					0	0	0		ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	ENSG00000244165|ENST00000321826|P2RY11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8121215701103	2	548.811116	1095.60768	1.5256	0.00083727	1.9089	0.0010476	3.4345	0.0018849	548.8118516770662	39.341	0.3708	41.178	41.066	41.437	1.8366					27	11	3	0	0	0	0.38174	1	16538	16538		34.402	0	1	5565300			9824	5362	4757	4780	11994	11994					0.0637002223129457
HPAVVIRQR	9	Unmodified	_HPAVVIRQR_					0	0	0		ENST00000584912.5_1_17:37006588-37006753:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.3282958865166	2	538.327799	1074.64105	2.6193	0.0014101	-1.3507	-0.00072713	1.2686	0.00068294	538.3269606988542	86.013	0.60841	86.265	86.006	86.614	0.25227					74	19	5	0	0	0	0.85206	1	35996	35996		0	0	1	131330000			9825	2272	4758	4781	11995	11995					0.10671068793840277
HPCCREDREV	10	Unmodified	_HPCCREDREV_					0	0	0			REV__chr6:30886049-30888688|147|24.22|0.22|6.78|+|0|None,DDR1|1	REV__chr6:30886049-30888688|147|24.22|0.22|6.78|+|0|None,DDR1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	622.3651000857353	2	622.268964	1242.52337	0.33439	0.00020808	3.0908	0.0019233	3.4252	0.0021314	622.2711592543218	51.193	0.15162	52.587	52.498	52.65	1.3938					6	4	2	0	0	0	0.12539	1	21432	21432		1.8442	1.4435	1	533770	+		9826	8333	4759	4782	11996	11996					-0.0881861991945243
HPDIHKAI	8	Unmodified	_HPDIHKAI_					0	0	0		ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	ENSG00000146233|ENST00000275016|CYP39A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7624389529228	2	465.761426	929.5083	2.6865	0.0012513	-1.7706	-0.00082467	0.91594	0.00042661	465.75981944509175	59.802	0.30865	61.221	60.99	61.298	1.4196					14	9	2	0	0	0	0.83518	1	25046	25046		18.135	3.5533	1	930700			9827	3141	4760	4783	11997	11997					0.04072624337175057
HPDLLIKVL	9	Unmodified	_HPDLLIKVL_					0	0	0		ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4	ENSG00000134744|ENST00000257177|TUT4	ENSG00000134744|ENST00000257177|TUT4	MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3334838747978	2	524.331685	1046.64882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.959	1	52.353	51.853	52.853	1.3938								0	0	0	0.045537	1	21334	21334		52.268	6.2474	1				9828	2632	4761	4784	11998	11998					0.1273578327075029
HPDLLIKVL	9	Unmodified	_HPDLLIKVL_					0	0	0		ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4;nc|ENSG00000134744|Q5TAX3-2|TUT4	ENSG00000134744|ENST00000257177|TUT4	ENSG00000134744|ENST00000257177|TUT4	MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3318359255791	2	524.331685	1046.64882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.083	1	52.477	51.977	52.977	1.3938								0	0	0	0.045537	1	21387	21387		52.268	12.311	1				9829	2632	4761	4784	11999	11999					0.1273578327075029
HPDPTRLLLF	10	Unmodified	_HPDPTRLLLF_					0	0	0		ENSG00000183751|ENST00000568546|TBL3;TBL3|p.R386Gfs*20|1|0.11|ENSG00000183751|chr16:1976081-1976081|C/-|frameshift_variant	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.8445922732353	2	604.842948	1207.67134	2.4651	0.001491	0.63544	0.00038434	3.1005	0.0018753	604.8433308578467	59.734	0.79721	61.154	60.8	61.597	1.4196					60	25	3	0	0	0	0.054878	4	25029	24984;25029;25081;25135		76.825	51.425	1	5581900			9830	4664	4762	4785	12000;12001;12002;12003	12001					0.07581382668354308
HPDPTRLLLF	10	Unmodified	_HPDPTRLLLF_					0	0	0		ENSG00000183751|ENST00000568546|TBL3;TBL3|p.R386Gfs*20|1|0.11|ENSG00000183751|chr16:1976081-1976081|C/-|frameshift_variant	ENSG00000183751|ENST00000568546|TBL3	ENSG00000183751|ENST00000568546|TBL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.8450195193291	2	604.842948	1207.67134	2.6431	0.0015986	0.64928	0.00039271	3.2923	0.0019913	604.8432451168899	59.225	0.7362	61.194	60.814	61.55	1.969					58	23	3	0	0	0	0.048298	4	24818	24772;24818;24870;24924		79.596	46.811	1	7710200			9831	4664	4762	4785	12004;12005;12006;12007	12005					0.07581382668354308
HPDTVEGLVL	10	Unmodified	_HPDTVEGLVL_					0	0	0		ENST00000366204.6_1_14:21488585-21489215:-|nuORF;ENST00000554277.5_1_14:21487301-21489989:-|nuORF;ENST00000553741.5_1_14:21488585-21492212:-|nuORF;nc|ENSG00000165795|Q9UN36-5|NDRG2;nc|ENSG00000165795|Q9UN36-2|NDRG2;nc|ENSG00000165795|Q9UN36-3|NDRG2;nc|ENSG00000165795|Q9UN36-6|NDRG2;ENSG00000165795|ENST00000556147|NDRG2	ENST00000366204.6_1_14:21488585-21489215:-|nuORF	ENST00000366204.6_1_14:21488585-21489215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2920410037041	2	540.290214	1078.56587	2.108	0.0011389	0.2305	0.00012454	2.3385	0.0012635	540.2901480171704	46.886	0.54025	48.268	47.964	48.504	1.3825					39	16	3	0	0	0	0.15278	2	19629	19629;19696		54.774	20.671	1	1767700			9832	3858	4763	4786	12008;12009	12008					0.029734217520854145
HPDTVEGLVL	10	Unmodified	_HPDTVEGLVL_					0	0	0		ENST00000366204.6_1_14:21488585-21489215:-|nuORF;ENST00000554277.5_1_14:21487301-21489989:-|nuORF;ENST00000553741.5_1_14:21488585-21492212:-|nuORF;nc|ENSG00000165795|Q9UN36-5|NDRG2;nc|ENSG00000165795|Q9UN36-2|NDRG2;nc|ENSG00000165795|Q9UN36-3|NDRG2;nc|ENSG00000165795|Q9UN36-6|NDRG2;ENSG00000165795|ENST00000556147|NDRG2	ENST00000366204.6_1_14:21488585-21489215:-|nuORF	ENST00000366204.6_1_14:21488585-21489215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2916747927666	2	540.290214	1078.56587	1.6793	0.0009073	0.6237	0.00033698	2.303	0.0012443	540.2902790405831	46.36	0.49092	48.33	48.126	48.617	1.9703					34	15	3	0	0	0	0.32206	1	19440	19440		37.974	14.826	1	2125500			9833	3858	4763	4786	12010	12010					0.029734217520854145
HPEHGVLFL	9	Unmodified	_HPEHGVLFL_					0	0	0		ENSG00000103544|ENST00000417362|VPS35L;nc|ENSG00000103544|Q7Z3J2-2|VPS35L;chr16:19681443-19682225|91|10.51|0.0|11.1|+|0|None,VPS35L|1	ENSG00000103544|ENST00000417362|VPS35L	ENSG00000103544|ENST00000417362|VPS35L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7842895388603	2	524.782359	1047.55016	1.6217	0.00085106	0.88749	0.00046574	2.5092	0.0013168	524.7828870523823	38.363	0.42009	39.659	39.445	39.865	1.2961					19	13	2	0	0	0	0.22519	2	16098	16098;16163		30.225	3.8835	1	840870			9834	1434	4764	4787	12011;12012	12011					0.028291800257193245
HPEHGVLFL	9	Unmodified	_HPEHGVLFL_					0	0	0		ENSG00000103544|ENST00000417362|VPS35L;nc|ENSG00000103544|Q7Z3J2-2|VPS35L;chr16:19681443-19682225|91|10.51|0.0|11.1|+|0|None,VPS35L|1	ENSG00000103544|ENST00000417362|VPS35L	ENSG00000103544|ENST00000417362|VPS35L	MSMS	GG20161007_CRH_Patient100_W632_02	4	524.7840453982353	2	524.782359	1047.55016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.673	1	39.493	38.993	39.993	1.8202								0	0	0	0.092123	1	15802	15802		36.044	3.9272	1				9835	1434	4764	4787	12013	12013					0.028291800257193245
HPEKLATVL	9	Unmodified	_HPEKLATVL_					0	0	0		DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant;nc|ENSG00000164934|Q9NV06-2|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;ENSG00000164934|ENST00000612750|DCAF13	DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant	DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2990905642509	2	504.297842	1006.58113	1.3029	0.00065706	2.2419	0.0011306	3.5448	0.0017876	504.29960971214234	22.178	0.33828	23.355	23.201	23.539	1.177					18	10	2	0	0	0	0.53525	1	9245	9245		13.906	0.39817	1	897850			9836	391	4765	4788	12014	12014					0.0781033333993264
HPEKLATVL	9	Unmodified	_HPEKLATVL_					0	0	0		DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant;nc|ENSG00000164934|Q9NV06-2|DCAF13;ENST00000521716.1_1_8:104427674-104432721:+|nuORF;ENSG00000164934|ENST00000612750|DCAF13	DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant	DCAF13|p.G85E|1|0.1|ENSG00000164934|chr8:103420447-103420447|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2960998415947	2	504.297842	1006.58113	0.34745	0.00017522	0.73837	0.00037236	1.0858	0.00054758	504.29887824901397	21.774	0.28601	23.389	23.232	23.518	1.6158					15	9	2	0	0	0	0.30098	1	9077	9077		25.399	4.9457	1	1322900			9837	391	4765	4788	12015	12015					0.0781033333993264
HPELLSLGL	9	Unmodified	_HPELLSLGL_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7865478396416	2	489.784567	977.554582	3.2147	0.0015745	1.7733	0.00086854	4.988	0.002443	489.7853771599873	60.097	0.34579	62.062	61.915	62.26	1.9653					13	10	2	0	0	0	0.1735	1	25216	25216		36.044	14.298	1	623370			9838	2235	4766	4789	12016	12016					0.06490644448604144
HPELLSLGL	9	Unmodified	_HPELLSLGL_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.784567	977.554582	3.2667	0.0016	0.78994	0.0003869	4.0567	0.0019869	489.7848925912932	60.652	0.31407	62.072	61.903	62.217	1.4196	0.0049688	-0.00027528	NaN	36.044	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	560490			9839	2235	4766	4789							0.06490644448604144
HPETTELVVL	10	Unmodified	_HPETTELVVL_					0	0	0		ENSG00000204590|ENST00000376621|GNL1;nc|ENSG00000204590|P36915-2|GNL1	ENSG00000204590|ENST00000376621|GNL1	ENSG00000204590|ENST00000376621|GNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3127929568291	2	569.311146	1136.60774	2.229	0.001269	-0.98096	-0.00055847	1.2481	0.00071054	569.3113330485486	45.434	0.38536	46.799	46.628	47.013	1.3653					25	11	3	0	0	0	0.51515	2	19017	19017;19073		26.884	11.036	1	1161800			9840	5150	4767	4790	12017;12018	12017					0.04489977440630355
HPETTELVVL	10	Unmodified	_HPETTELVVL_					0	0	0		ENSG00000204590|ENST00000376621|GNL1;nc|ENSG00000204590|P36915-2|GNL1	ENSG00000204590|ENST00000376621|GNL1	ENSG00000204590|ENST00000376621|GNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.3127319216728	2	569.311146	1136.60774	1.8958	0.0010793	-0.19112	-0.00010881	1.7047	0.00097049	569.3118180363082	44.92	0.44472	46.879	46.639	47.083	1.9596					20	13	2	0	0	0	0.38674	2	18829	18781;18829		34.102	11.366	1	1120700			9841	5150	4767	4790	12019;12020	12020					0.04489977440630355
HPEWSFTTV	9	Unmodified	_HPEWSFTTV_					0	0	0		nc|ENSG00000134602|Q9P289-2|STK26;nc|ENSG00000134602|Q9P289-3|STK26;ENSG00000134602|ENST00000394334|STK26	nc|ENSG00000134602|Q9P289-2|STK26	nc|ENSG00000134602|Q9P289-2|STK26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2628661990166	2	552.261456	1102.50836	1.7877	0.0009873	2.0604	0.0011379	3.8481	0.0021252	552.2625358834945	46.788	0.38156	48.171	47.932	48.314	1.3825					18	11	2	0	0	0	0.46905	1	19592	19592		16.942	7.5592	1	733770			9842	2626	4768	4791	12021	12021					-0.03879420453495186
HPEWSFTTV	9	Unmodified	_HPEWSFTTV_					0	0	0		nc|ENSG00000134602|Q9P289-2|STK26;nc|ENSG00000134602|Q9P289-3|STK26;ENSG00000134602|ENST00000394334|STK26	nc|ENSG00000134602|Q9P289-2|STK26	nc|ENSG00000134602|Q9P289-2|STK26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2628661990166	2	552.261456	1102.50836	1.4588	0.00080564	2.5282	0.0013962	3.987	0.0022018	552.2628523652693	46.323	0.40316	48.293	48.126	48.529	1.9703					21	12	3	0	0	0	0.5697	1	19417	19417		12.532	3.1484	1	820340			9843	2626	4768	4791	12022	12022					-0.03879420453495186
HPEYAVSVLLR	11	Unmodified	_HPEYAVSVLLR_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	642.3611328005791	2	642.358962	1282.70337	2.0743	0.0013324	-0.098378	-6.3194E-05	1.9759	0.0012692	642.3595104147026	42.819	0.24539	42.819	42.634	42.88	0					12	7	2	0	0	0	0.82685	1	17896	17896		14.218	9.6893	1	378910		+	9844	341	4769	4792	12023	12023					0.0733275035152019
HPEYGEVIQL	10	Unmodified	_HPEYGEVIQL_					0	0	0		ENST00000487533.1_1_2:9411463-9411580:-|nuORF;ENST00000462917.1_1_17:39846204-39847075:+|nuORF;ENST00000310837.8_1_17:39845180-39847075:+|nuORF;ENST00000488260.1_1_3:40351432-40353086:+|nuORF;ENSG00000173812|ENST00000469257|EIF1;ENSG00000114784|ENST00000232905|EIF1B	ENST00000487533.1_1_2:9411463-9411580:-|nuORF	ENST00000487533.1_1_2:9411463-9411580:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	592.8032104372978	2	592.800946	1183.58734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.084	1	46.028	45.528	46.528	1.9438								0	0	0	0.16284	1	18481	18481		39.957	14.558	1				9845	1880	4770	4793	12024	12024					0.002888067808271444
HPFDQRIIL	9	Unmodified	_HPFDQRIIL_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8223144412041	2	569.822015	1137.62948	2.3614	0.0013456	0.35179	0.00020046	2.7132	0.001546	569.8217963768352	39.37	0.26621	40.667	40.54	40.806	1.2961					12	8	2	0	0	0	0.56115	1	16520	16520		13.042	6.3193	1	491970			9846	3829	4771	4794	12025	12025					0.06616826979848156
HPFDQRIIL	9	Unmodified	_HPFDQRIIL_					0	0	0		nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	569.822015	1137.62948	1.3594	0.00077463	0.74546	0.00042478	2.1049	0.0011994	569.8216957928315	38.868	0.38757	40.705	40.493	40.88	1.8366	0.019072	0.00030238	NaN	13.042	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408400			9847	3829	4771	4794							0.06616826979848156
HPFFYEVRK	9	Unmodified	_HPFFYEVRK_					0	0	0		ENST00000492985.1_1_2:25186258-25194710:-|nuORF	ENST00000492985.1_1_2:25186258-25194710:-|nuORF	ENST00000492985.1_1_2:25186258-25194710:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2165710330009	3	408.217102	1221.62948	-0.79018	-0.00032257	-1.1945	-0.0004876	-1.9846	-0.00081017	408.21673392831434	12.914	0.55477	12.914	12.746	13.301	0					59	17	5	0	0	0	0.59568	1	5420	5420		11.495	0.6952	1	17600000			9848	6921	4772	4795	12026	12026					0.027528269798267502
HPFFYEVRK	9	Unmodified	_HPFFYEVRK_					0	0	0		ENST00000492985.1_1_2:25186258-25194710:-|nuORF	ENST00000492985.1_1_2:25186258-25194710:-|nuORF	ENST00000492985.1_1_2:25186258-25194710:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2169067263603	3	408.217102	1221.62948	0.3555	0.00014512	-2.6508	-0.0010821	-2.2953	-0.00093698	408.2161719697631	12.666	0.40033	12.755	12.586	12.986	0.089381					35	12	4	0	0	0	0.75101	1	5304	5304		5.2969	0.24936	1	3715100			9849	6921	4772	4795	12027	12027					0.027528269798267502
HPFIIYTK	8	Unmodified	_HPFIIYTK_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|297|1|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|297|1|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|297|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1969482302666	3	340.195527	1017.56475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.16	1	21.37	20.87	21.87	0.21024								0	0	0	1.0178	1	8792	8792		0.45834	0	1				9850	7623	4773	4796	12028	12028					0.05667252173861925
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3570434451103	2	584.355494	1166.69644	2.4006	0.0014028	2.0002	0.0011688	4.4008	0.0025716	584.3566602555965	89.766	0.34866	89.766	89.588	89.937	0					26	10	3	0	0	0	0.82604	3	37488	37488;37536;37582		2.3027	1.4384	1	2720900	+		9851	14783	4774	4797	12029;12030;12031	12029					0.11975482261573234
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3583251833916	2	584.355494	1166.69644	2.513	0.0014685	2.4129	0.00141	4.9259	0.0028785	584.3569529036686	89.664	0.41656	89.888	89.647	90.063	0.22359					31	12	3	0	0	0	0.82604	1	37596	37596		2.3027	0.82083	1	2973600	+		9852	14783	4774	4797	12032	12032					0.11975482261573234
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3591186404228	2	584.355494	1166.69644	5.7009	0.0033314	0.87067	0.00050878	6.5716	0.0038401	584.3556407766889	88.91	0.32191	89.967	89.853	90.175	1.0562					15	9	2	0	0	0	0.82604	1	37488	37488		2.3027	0	1	1189800	+		9853	14783	4774	4797	12033	12033					0.11975482261573234
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	584.355494	1166.69644	2.4006	0.0014028	2.0002	0.0011688	4.4008	0.0025716	584.3566602555965	89.766	0.34866	89.766	89.588	89.937	0	-0.17158	1.3102E-05	NaN	2.3027	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2720900	+		9854	14783	4774	4797							0.11975482261573234
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	584.355494	1166.69644	5.7009	0.0033314	0.87067	0.00050878	6.5716	0.0038401	584.3556407766889	88.91	0.32191	89.967	89.853	90.175	1.0562	0.028499	-0.001307	NaN	2.3027	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1189800	+		9855	14783	4774	4797							0.11975482261573234
HPFIKIWVK	9	Unmodified	_HPFIKIWVK_					0	0	0			REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	REV__tr|A0A553SH95|A0A553SH95_NIACILargeribosomalsubunitproteinuL16OS=NialliacirculansOX=1397GN=rplPPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	584.355494	1166.69644	4.6241	0.0027021	1.1627	0.00067945	5.7868	0.0033816	584.3559805325389	88.685	0.35326	90.132	89.985	90.338	1.4467	0.1935	-0.00096567	NaN	2.3027	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	772350	+		9856	14783	4774	4797							0.11975482261573234
HPFKDLVQL	9	Unmodified	_HPFKDLVQL_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.8095580935478	2	548.811116	1095.60768	2.0599	0.0011305	1.0716	0.00058809	3.1315	0.0017186	548.8114176510616	39.856	0.36966	41.166	40.991	41.361	1.3102					26	11	3	0	0	0	0.023685	1	16671	16671		96.367	14.476	1	7248100			9857	1832	4775	4798	12034	12034					0.06370022231271832
HPFKDLVQL	9	Unmodified	_HPFKDLVQL_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8124267458916	2	548.811116	1095.60768	1.5256	0.00083727	1.9089	0.0010476	3.4345	0.0018849	548.8118516770662	39.341	0.3708	41.178	41.066	41.437	1.8366					27	11	3	0	0	0	0.03071	1	16486	16486		86.332	18.494	1	5565300			9858	1832	4775	4798	12035	12035					0.06370022231271832
HPFLAIYEL	9	Unmodified	_HPFLAIYEL_					0	0	0		ENST00000574268.1_1_17:4710512-4711565:+|nuORF;nc|ENSG00000129219|O14939-3|PLD2;PLD2|p.M538Tfs*102|1|0.86|ENSG00000129219|chr17:4816967-4816968|TG/-|frameshift_variant;nc|ENSG00000129219|O14939-4|PLD2;ENSG00000129219|ENST00000263088|PLD2	ENST00000574268.1_1_17:4710512-4711565:+|nuORF	ENST00000574268.1_1_17:4710512-4711565:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.8015624880791	2	551.800217	1101.58588	1.8745	0.0010344	2.6901	0.0014844	4.5646	0.0025188	551.8012841069506	68.949	0.61746	70.314	69.997	70.614	1.3657					59	19	4	0	0	0	0.18999	1	28893	28893		34.187	5.7005	1	4414200			9859	2396	4776	4799	12036	12036					0.03915217482699518
HPFLAIYEL	9	Unmodified	_HPFLAIYEL_					0	0	0		ENST00000574268.1_1_17:4710512-4711565:+|nuORF;nc|ENSG00000129219|O14939-3|PLD2;PLD2|p.M538Tfs*102|1|0.86|ENSG00000129219|chr17:4816967-4816968|TG/-|frameshift_variant;nc|ENSG00000129219|O14939-4|PLD2;ENSG00000129219|ENST00000263088|PLD2	ENST00000574268.1_1_17:4710512-4711565:+|nuORF	ENST00000574268.1_1_17:4710512-4711565:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.8018066287041	2	551.800217	1101.58588	2.0123	0.0011104	1.8842	0.0010397	3.8965	0.0021501	551.8010106858909	68.387	0.84505	70.257	69.611	70.456	1.87					63	26	4	0	0	0	0.098957	1	28631	28631		49.669	24.995	1	3673900			9860	2396	4776	4799	12037	12037					0.03915217482699518
HPFPGPGLAI	10	Unmodified	_HPFPGPGLAI_					0	0	0		nc|ENSG00000163655|P49915-2|GMPS;ENSG00000163655|ENST00000496455|GMPS;KDM4C-GMPS|1|fusion;KDM4C-GMPS|2|fusion	nc|ENSG00000163655|P49915-2|GMPS	nc|ENSG00000163655|P49915-2|GMPS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2808410525322	2	503.279452	1004.54435	2.7717	0.0013949	-1.0819	-0.00054448	1.6898	0.00085045	503.27885259519473	50.269	0.65713	51.66	51.387	52.044	1.3911					37	20	2	0	0	0	0.19438	1	21016	21016		49.669	9.7116	1	3947800			9861	3709	4777	4800	12038	12038					0.0422608151403665
HPFPGPGLAI	10	Unmodified	_HPFPGPGLAI_					0	0	0		nc|ENSG00000163655|P49915-2|GMPS;ENSG00000163655|ENST00000496455|GMPS;KDM4C-GMPS|1|fusion;KDM4C-GMPS|2|fusion	nc|ENSG00000163655|P49915-2|GMPS	nc|ENSG00000163655|P49915-2|GMPS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2798034548759	2	503.279452	1004.54435	1.4741	0.0007419	-0.40909	-0.00020588	1.0651	0.00053602	503.27916909978626	49.704	0.69034	51.681	51.349	52.039	1.9772					40	21	2	0	0	0	0.19438	3	20787	20737;20787;20837		49.669	49.669	1	3361500			9862	3709	4777	4800	12039;12040;12041	12040					0.0422608151403665
HPFRDLTQL	9	Unmodified	_HPFRDLTQL_					0	0	0		nc|ENSG00000138802|O95487-2|SEC24B;ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B	nc|ENSG00000138802|O95487-2|SEC24B	nc|ENSG00000138802|O95487-2|SEC24B	MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8055908083916	2	563.803823	1125.59309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.461	1	33.739	33.239	34.239	1.2782								0	0	0	0.42693	1	13615	13615		1.8442	0.19162	1				9863	2856	4778	4801	12042	12042					0.035319500831292316
HPFVEPNKR	9	Unmodified	_HPFVEPNKR_					0	0	0			REV__ENST00000478263.5_1_3:69249557-69249674:-|nuORF	REV__ENST00000478263.5_1_3:69249557-69249674:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3077880740166	2	562.30399	1122.59343	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.217	1	50.217	49.717	50.717	0								0	0	0	0.42693	1	20951	20951		2.0598	0.40713	1		+		9864	13327	4779	4802	12043	12043					0.03703369802974521
HPGFQQMPEDK	11	Unmodified	_HPGFQQMPEDK_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant;DST|p.E3356Afs*12|1|0.31|ENSG00000151914|chr6:56535225-56535226|-/CCAG|frameshift_variant;nc|ENSG00000151914|Q03001-9|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.5374023318291	3	438.536283	1312.58702	0.17478	7.6649E-05	1.4926	0.00065457	1.6674	0.00073122	438.53714955221477	15.197	0.46771	15.197	15.061	15.528	0					31	14	4	0	0	0	1.0156	1	6360	6360		2.8433	0	1	1861600			9865	3306	4780	4803	12044	12044					-0.05676936210693384
HPGGLHSI	8	Unmodified	_HPGGLHSI_					0	0	0			REV__ENST00000480630.5_1_1:40430901-40433516:+|nuORF	REV__ENST00000480630.5_1_1:40430901-40433516:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	409.2242004275322	2	409.219395	816.424236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.25	1	103.3	102.8	103.8	0.059502								0	0	0	1.0178	1	43276	43276		2.5775	0	1		+		9866	13353	4781	4804	12045	12045					0.008680932402853614
HPHDLVILM	9	Unmodified	_HPHDLVILM_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7932006716728	2	537.791869	1073.56919	1.8166	0.00097695	3.8541	0.0020727	5.6707	0.0030496	537.7944891090241	42.124	0.43239	44.045	43.857	44.29	1.9211					27	13	3	0	0	0	0.087207	1	17628	17628		53.576	25.089	1	2144900			9867	706	4782	4805	12046	12046					0.03534393325094243
HPHDLVILM	9	Unmodified	_HPHDLVILM_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;nc|ENSG00000052841|Q96AE7-2|TTC17	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	537.791869	1073.56919	1.8501	0.00099498	5.456	0.0029342	7.3061	0.0039292	537.7949851045826	42.722	0.40581	44.062	43.859	44.265	1.3399	0.0083289	0.0009966	NaN	53.576	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2511000			9868	706	4782	4805							0.03534393325094243
HPHKGKGP	8	Unmodified	_HPHKGKGP_					0	0	0		ENST00000316292.13_1_6:74229958-74230393:-|nuORF	ENST00000316292.13_1_6:74229958-74230393:-|nuORF	ENST00000316292.13_1_6:74229958-74230393:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	428.7420837283134	2	429.240661	856.46677	2.7621	0.0011856	1.9622	0.00084224	4.7243	0.0020279	429.2417831786034	72.122	0.51702	73.934	73.621	74.138	1.8119					33	16	3	0	0	0	2.3239	1	30290	30290		2.8892	0	1	4650000			9869	5829	4783	4806	12047	12047					0.03279488368525563
HPHPHLSF	8	Unmodified	_HPHPHLSF_					0	0	0		CON__P02668	CON__P02668	CON__P02668	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.4992248415947	3	324.499721	970.477334	-3.083	-0.0010004	1.4547	0.00047206	-1.6283	-0.00052838	324.5002048961409	18.19	0.40484	18.19	18.026	18.431	0					44	15	3	0	0	0	0.26264	3	7572	7526;7572;7619		60.39	28.273	1	8577200		+	9870	338	4784	4807	12048;12049;12050	12049					-0.009085289770609961
HPHPHLSF	8	Unmodified	_HPHPHLSF_					0	0	0		CON__P02668	CON__P02668	CON__P02668	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2469970583916	2	486.245944	970.477334	0.75167	0.00036549	0.73657	0.00035815	1.4882	0.00072365	486.2463571364397	18.182	0.31211	18.182	18.088	18.401	0					20	12	2	0	0	0	0.56817	1	7583	7583		42.968	10.514	1	1182500		+	9871	338	4784	4807	12051	12051					-0.009085289770609961
HPHPHLSF	8	Unmodified	_HPHPHLSF_					0	0	0		CON__P02668	CON__P02668	CON__P02668	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.4994689822197	3	324.499721	970.477334	-3.0564	-0.00099179	2.5708	0.00083422	-0.48556	-0.00015756	324.50068759033365	18.617	1.2033	18.617	18.431	19.634	0					85	38	4	0	0	0	0.38877	8	7735	7688;7735;7787;7828;7881;7931;7979;8034		53.576	26.272	1	3475800		+	9872	338	4784	4807	12052;12053;12054;12055;12056;12057;12058;12059	12053					-0.009085289770609961
HPHPHLSF	8	Unmodified	_HPHPHLSF_					0	0	0		CON__P02668	CON__P02668	CON__P02668	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	485.9667846560478	2	486.245944	970.477334	0.76763	0.00037326	2.5457	0.0012378	3.3133	0.0016111	486.24760405676165	18.613	0.37244	18.613	18.431	18.804	0					19	11	2	0	0	0	2.3239	1	7793	7793		13.508	2.3934	1	381640		+	9873	338	4784	4807	12060	12060					-0.009085289770609961
HPIDGFLQSL	10	Unmodified	_HPIDGFLQSL_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8013183474541	2	563.798206	1125.58186	3.1732	0.001789	1.6382	0.00092359	4.8113	0.0027126	563.7989183641574	61.101	0.40071	62.521	62.345	62.746	1.4196					35	12	4	0	0	0	0.04309	3	25638	25589;25638;25693		96.111	28.03	1	7745000			9874	1686	4785	4808	12061;12062;12063	12062					0.024091279889944417
HPIDGFLQSL	10	Unmodified	_HPIDGFLQSL_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8000366091728	2	563.798206	1125.58186	3.3639	0.0018966	0.66636	0.00037569	4.0302	0.0022722	563.7984000844015	60.564	0.43613	62.529	62.324	62.76	1.9653					41	13	4	0	0	0	0.063492	2	25445	25391;25445		85.642	33.921	1	6067300			9875	1686	4785	4808	12064;12065	12065					0.024091279889944417
HPILRHCL	8	Unmodified	_HPILRHCL_					0	0	0		ENST00000448120.6_1_12:3050000-3050282:+|nuORF	ENST00000448120.6_1_12:3050000-3050282:+|nuORF	ENST00000448120.6_1_12:3050000-3050282:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7792846560478	2	494.779096	987.54364	1.72	0.00085101	0.43441	0.00021494	2.1544	0.0010659	494.77916815695636	81.841	0.36776	81.841	81.671	82.039	0					34	11	4	0	0	0	0.88958	2	34067	34067;34120		2.8892	0	1	12209000			9876	6591	4786	4809	12066;12067	12066					0.0493696359334308
HPILRHCL	8	Unmodified	_HPILRHCL_					0	0	0		ENST00000448120.6_1_12:3050000-3050282:+|nuORF	ENST00000448120.6_1_12:3050000-3050282:+|nuORF	ENST00000448120.6_1_12:3050000-3050282:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7811767458916	2	494.779096	987.54364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.791	1	82.487	81.987	82.987	1.6959								0	0	0	1.0178	1	33895	33895		6.3541	1.5981	1				9877	6591	4786	4809	12068	12068					0.0493696359334308
HPIPNRPV	8	Unmodified	_HPIPNRPV_					0	0	0		nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10;ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2710449099541	2	465.269419	928.524284	3.3535	0.0015603	-0.14854	-6.9113E-05	3.205	0.0014912	465.26982952141486	93.216	0.45535	93.385	93.125	93.58	0.16835					34	13	3	0	0	0	0.88504	1	39036	39036		5.7604	2.1639	1	1624000			9878	4138	4787	4810	12069	12069					0.05716330574091444
HPIPNRPV	8	Unmodified	_HPIPNRPV_					0	0	0		nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10;ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2726623415947	2	465.269419	928.524284	4.3925	0.0020437	0.70164	0.00032645	5.0942	0.0023702	465.27000238683627	93.581	0.41489	94.453	94.226	94.641	0.87177					23	12	3	0	0	0	0.88504	1	39370	39370		5.7604	2.8712	1	1401000			9879	4138	4787	4810	12070	12070					0.05716330574091444
HPIPNRPV	8	Unmodified	_HPIPNRPV_					0	0	0		nc|ENSG00000170325|Q9NQV6-2|PRDM10;nc|ENSG00000170325|Q9NQV6-1|PRDM10;nc|ENSG00000170325|Q9NQV6-5|PRDM10;nc|ENSG00000170325|Q9NQV6|PRDM10;ENSG00000170325|ENST00000360871|PRDM10;nc|ENSG00000170325|Q9NQV6-7|PRDM10;nc|ENSG00000170325|Q9NQV6-6|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	nc|ENSG00000170325|Q9NQV6-2|PRDM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2715026736259	2	465.269419	928.524284	3.5694	0.0016607	1.7163	0.00079855	5.2857	0.0024593	465.27037244718196	92.982	0.41354	94.259	94.038	94.452	1.277					26	12	3	0	0	0	0.88504	2	39096	39096;39146		5.7604	2.8712	1	1209300			9880	4138	4787	4810	12071;12072	12071					0.05716330574091444
HPISRLRW	8	Unmodified	_HPISRLRW_					0	0	0			REV__ENST00000590320.2_1_19:10333232-10333358:-|nuORF	REV__ENST00000590320.2_1_19:10333232-10333358:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0697204470634	3	355.54192	1063.60393	0.28723	0.00010212	-0.62201	-0.00022115	-0.33479	-0.00011903	355.8760055521974	27.164	0.24608	28.911	28.835	29.081	1.747					11	7	2	0	0	0	2.3239	1	11361	11361		3.9444	1.6616	1	684510	+		9881	14065	4788	4811	12073	12073					0.07467397248069574
HPKGRGTS	8	Unmodified	_HPKGRGTS_					0	0	0			REV__nc|ENSG00000166105|Q8NCI6-4|GLB1L3	REV__nc|ENSG00000166105|Q8NCI6-4|GLB1L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2291137576103	2	420.227751	838.440949	2.4792	0.0010418	-0.58209	-0.00024461	1.8971	0.00079722	420.2275207023407	73.215	0.47823	73.54	73.276	73.754	0.32494					38	15	3	0	0	0	0.88958	2	30594	30594;30644		2.8892	0	1	11836000	+		9882	10810	4789	4812	12074;12075	12074					0.015265941262214255
HPKLKTTAKK	10	Unmodified	_HPKLKTTAKK_					0	0	0		ENSG00000127364|ENST00000247881|TAS2R4	ENSG00000127364|ENST00000247881|TAS2R4	ENSG00000127364|ENST00000247881|TAS2R4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1533691287041	3	384.580152	1150.71863	0.43098	0.00016575	3.0093	0.0011573	3.4402	0.001323	384.58145974167957	26.313	0.72348	28.06	27.614	28.337	1.747					39	23	2	0	0	0	0.12559	1	10979	10979		0	0	1	2635700			9883	2332	4790	4813	12076	12076					0.1492966193934535
HPKRFLGLRYK	11	Unmodified	_HPKRFLGLRYK_					0	0	0			REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2856628298759	3	472.285851	1413.83572	1.9481	0.00092004	-2.9369	-0.0013871	-0.98887	-0.00046703	472.2846349788624	97.645	0.15261	97.645	97.537	97.69	0					9	4	3	0	0	0	1.0357	1	40833	40833		0.50596	0	1	4413000	+		9884	8132	4791	4814	12077	12077					0.14535819878960865
HPKRFLGLRYK	11	Unmodified	_HPKRFLGLRYK_					0	0	0			REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	472.285851	1413.83572	1.9481	0.00092004	-2.9369	-0.0013871	-0.98887	-0.00046703	472.2846349788624	97.645	0.15261	97.645	97.537	97.69	0	-0.024793	0.00086823	NaN	0.50596	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4413000	+		9885	8132	4791	4814							0.14535819878960865
HPKWKIYI	8	Unmodified	_HPKWKIYI_					0	0	0			REV__ENST00000520545.5_1_8:99229439-99248416:-|nuORF	REV__ENST00000520545.5_1_8:99229439-99248416:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	362.2176086306572	3	362.214922	1083.62294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.29	1	105.45	104.95	105.95	0.16679								0	0	0	1.0178	1	44746	44746		0.40072	0.1317	1		+		9886	13625	4792	4815	12078	12078					0.08446933819118385
HPLDTLFLL	9	Unmodified	_HPLDTLFLL_					0	0	0		nc|ENSG00000123989|Q8IZ52-2|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF;ENSG00000123989|ENST00000243776|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.8092529177666	2	534.808042	1067.60153	2.8184	0.0015073	0.94371	0.00050471	3.7621	0.002012	534.808125450484	79.595	0.4023	80.846	80.707	81.109	1.2512					27	12	3	0	0	0	0.1735	1	33406	33406		36.044	5.8194	1	1222900			9887	2201	4793	4816	12079	12079					0.07043503999761924
HPLDTLFLL	9	Unmodified	_HPLDTLFLL_					0	0	0		nc|ENSG00000123989|Q8IZ52-2|CHPF;nc|ENSG00000123989|Q8IZ52-4|CHPF;ENSG00000123989|ENST00000243776|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	534.808042	1067.60153	2.1728	0.001162	1.255	0.00067118	3.4278	0.0018332	534.808440216827	79.063	0.49493	80.798	80.598	81.093	1.735	-0.023982	0.00021943	NaN	36.044	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1231500			9888	2201	4793	4816							0.07043503999761924
HPLFGGFG	8	Unmodified	_HPLFGGFG_					0	0	0			REV__ENST00000219235.4_1_16:57398042-57398159:+|nuORF	REV__ENST00000219235.4_1_16:57398042-57398159:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2125732302666	2	416.211038	830.407523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.604	1	27.875	27.375	28.375	0.27119								0	0	0	1.0178	1	11542	11542		2.8892	0	1		+		9889	12077	4794	4817	12080	12080					-0.014464076456533803
HPLFGGFG	8	Unmodified	_HPLFGGFG_					0	0	0			REV__ENST00000219235.4_1_16:57398042-57398159:+|nuORF	REV__ENST00000219235.4_1_16:57398042-57398159:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2124511599541	2	416.211038	830.407523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.717	1	27.988	27.488	28.488	0.27119								0	0	0	1.0178	1	11590	11590		2.8892	0	1		+		9890	12077	4794	4817	12081	12081					-0.014464076456533803
HPLGDIVAF	9	Unmodified	_HPLGDIVAF_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7636291384697	2	484.763635	967.512717	0.88085	0.00042701	0.77566	0.00037601	1.6565	0.00080302	484.7641304449054	52.865	0.51102	54.265	54.027	54.538	1.4005					28	15	3	0	0	0	0.061246	3	22112	22112;22163;22216		63.563	23.606	1	2361200			9891	4107	4795	4818	12082;12083;12084	12082					0.027660887600973183
HPLGDIVAF	9	Unmodified	_HPLGDIVAF_					0	0	0		ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	ENSG00000169710|ENST00000306749|FASN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7635070681572	2	484.763635	967.512717	1.2099	0.00058652	-0.52026	-0.0002522	0.68964	0.00033431	484.7635077760793	52.289	0.5282	54.261	54.016	54.545	1.9722					28	16	2	0	0	0	0.087207	3	21888	21888;21932;21978		53.576	13.618	1	2403500			9892	4107	4795	4818	12085;12086;12087	12085					0.027660887600973183
HPLGRWEVK	9	Unmodified	_HPLGRWEVK_					0	0	0		nc|ENSG00000153246|Q13018-2|PLA2R1;ENSG00000153246|ENST00000283243|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3128539919853	2	561.314358	1120.61416	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.957	1	48.957	48.457	49.457	0								0	0	0	0.42693	1	20441	20441		4.3292	0.38484	1				9893	3352	4796	4819	12088	12088					0.058679601826497674
HPLGRWEVK	9	Unmodified	_HPLGRWEVK_					0	0	0		nc|ENSG00000153246|Q13018-2|PLA2R1;ENSG00000153246|ENST00000283243|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3127929568291	2	561.314358	1120.61416	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.051	1	49.051	48.551	49.551	0								0	0	0	0.42693	1	20480	20480		4.3292	0.38484	1				9894	3352	4796	4819	12089	12089					0.058679601826497674
HPLLKILHLLA	11	Unmodified	_HPLLKILHLLA_					0	0	0		ATRIP|p.M541_L542delinsI|1|0.09|ENSG00000164053|chr3:48460676-48460678|TGC/-|inframe_deletion	ATRIP|p.M541_L542delinsI|1|0.09|ENSG00000164053|chr3:48460676-48460678|TGC/-|inframe_deletion	ATRIP|p.M541_L542delinsI|1|0.09|ENSG00000164053|chr3:48460676-48460678|TGC/-|inframe_deletion	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4167968630791	2	634.416083	1266.81761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.03	1	108.03	107.53	108.53	0								0	0	0	0.63775	1	46465	46465		1.4819	0.15237	1				9895	94	4797	4820	12090	12090					0.19487684904288471
HPLMARPVV	9	Unmodified	_HPLMARPVV_					0	0	0		nc|ENSG00000095539|Q9NTN9-3|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000095539|ENST00000210633|SEMA4G	nc|ENSG00000095539|Q9NTN9-3|SEMA4G	nc|ENSG00000095539|Q9NTN9-3|SEMA4G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2951537966728	2	510.294579	1018.57461	1.9655	0.001003	1.4135	0.00072128	3.379	0.0017243	510.2954540205666	42.881	0.41031	44.221	44.014	44.425	1.3399					28	12	3	0	0	0	0.37357	1	18031	18031		21.747	0	1	4084100			9896	1187	4798	4821	12091	12091					0.06606116907585147
HPLMVPAL	8	Unmodified	_HPLMVPAL_					0	0	0			REV__ENST00000318562.12_2_11:727281-727653:+|nuORF	REV__ENST00000318562.12_2_11:727281-727653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.2531616091728	2	439.251849	876.489145	2.6624	0.0011695	-0.17469	-7.6732E-05	2.4877	0.0010927	439.2514146861175	73.223	0.47614	73.548	73.34	73.816	0.32494					39	15	3	0	0	0	0.88958	1	30616	30616		2.8892	0	1	18127000	+		9897	12396	4799	4822	12092	12092					0.04595951721921665
HPLPGSRD	8	Unmodified	_HPLPGSRD_					0	0	0		ENSG00000174109|ENST00000442039|UQCC4;ENST00000563974.1_2_16:1470249-1470717:-|nuORF	ENSG00000174109|ENST00000442039|UQCC4	ENSG00000174109|ENST00000442039|UQCC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	439.2537414431572	2	439.727584	877.440614	2.9961	0.0013175	3.9139	0.001721	6.9099	0.0030385	439.72955545470427	72.415	0.24011	73.744	73.672	73.913	1.3297					11	7	2	0	0	0	2.3239	1	30430	30430		5.2307	2.3415	1	766890			9898	4313	4800	4823	12093	12093					-0.003008255936151727
HPLPSQGLL	9	Unmodified	_HPLPSQGLL_					0	0	0			REV__ENST00000443619.6_1_2:65541275-65559155:-|nuORF	REV__ENST00000443619.6_1_2:65541275-65559155:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2784301638603	2	481.276909	960.539266	1.9542	0.00094049	1.302	0.00062662	3.2562	0.0015671	481.27689063890017	79.251	0.24515	79.251	79.113	79.359	0					19	7	3	0	0	0	0.75267	1	33003	33003		5.2307	0	1	3927900	+		9899	13097	4801	4824	12094	12094					0.05741777651439861
HPLPTKPQ	8	Unmodified	_HPLPTKPQ_					0	0	0		ENST00000303305.10_1_12:56506693-56506738:+|nuORF	ENST00000303305.10_1_12:56506693-56506738:+|nuORF	ENST00000303305.10_1_12:56506693-56506738:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	458.7889892458916	2	459.263802	916.513051	2.8762	0.0013209	2.6653	0.0012241	5.5415	0.002545	459.2649798880568	76.301	0.25108	76.623	76.54	76.791	0.32163					13	7	2	0	0	0	2.3239	1	31939	31939		2.5775	1.7838	1	3838100			9900	5767	4802	4825	12095	12095					0.05145508479949967
HPLQKVYS	8	Unmodified	_HPLQKVYS_					0	0	0			REV__SNRNP200|p.L1960V|1|0.05|ENSG00000144028|chr2:96277592-96277592|G/C|missense_variant	REV__SNRNP200|p.L1960V|1|0.05|ENSG00000144028|chr2:96277592-96277592|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2675659060478	2	486.269084	970.523616	2.8561	0.0013888	-1.2287	-0.0005975	1.6273	0.00079132	486.2662267423876	81.789	0.61306	82.069	81.753	82.366	0.2802					41	19	3	0	0	0	0.88504	1	34164	34164		5.7604	1.816	1	6794100	+		9901	14630	4803	4826	12096	12096					0.0371749113437545
HPLRLRLM	8	Unmodified	_HPLRLRLM_					0	0	0		nc|ENSG00000122008|Q9UBT6-8|POLK;ENSG00000122008|ENST00000241436|POLK	nc|ENSG00000122008|Q9UBT6-8|POLK	nc|ENSG00000122008|Q9UBT6-8|POLK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	518.3183471560478	2	518.315846	1034.61714	2.4171	0.0012528	2.638	0.0013673	5.0551	0.0026201	518.317398312467	82.745	0.48817	83.016	82.787	83.275	0.27029					44	15	4	0	0	0	0.88958	1	34633	34633		2.8892	2.8892	1	11313000			9902	2148	4804	4827	12097	12097					0.10121512035811975
HPLVFLFLG	9	Unmodified	_HPLVFLFLG_					0	0	0		MED1-CLPB|1|fusion;nc|ENSG00000162129|Q9H078-5|CLPB;nc|ENSG00000162129|Q9H078-3|CLPB;nc|ENSG00000162129|Q9H078-4|CLPB;ENSG00000162129|ENST00000538039|CLPB;nc|ENSG00000162129|Q9H078|CLPB	MED1-CLPB|1|fusion	MED1-CLPB|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2072326540947	3	348.207656	1041.60114	-0.46991	-0.00016363	-3.5529	-0.0012371	-4.0228	-0.0014008	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.75267	1	12966	12966		2.9952	0	1	6459500			9903	3607	4805	4828	12098	12098					0.08200129070542062
HPLYRKMK	8	Unmodified	_HPLYRKMK_					0	0	0		ENST00000465571.2_1_20:39794900-39795514:+|nuORF;nc|ENSG00000124181|P19174|PLCG1;ENSG00000124181|ENST00000685551|PLCG1	ENST00000465571.2_1_20:39794900-39795514:+|nuORF	ENST00000465571.2_1_20:39794900-39795514:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2065612673759	3	358.207661	1071.60115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.31	1	24.961	24.461	25.461	1.6511								0	0	0	1.0178	1	9734	9734		1.8442	0.6509	1				9904	2213	4806	4829	12099	12099					0.06821805798927016
HPLYRKMK	8	Unmodified	_HPLYRKMK_					0	0	0		ENST00000465571.2_1_20:39794900-39795514:+|nuORF;nc|ENSG00000124181|P19174|PLCG1;ENSG00000124181|ENST00000685551|PLCG1	ENST00000465571.2_1_20:39794900-39795514:+|nuORF	ENST00000465571.2_1_20:39794900-39795514:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2075378298759	3	358.207661	1071.60115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.476	1	25.127	24.627	25.627	1.6511								0	0	0	1.0178	1	9803	9803		1.8442	0.6509	1				9905	2213	4806	4829	12100	12100					0.06821805798927016
HPLYVDVVL	9	Unmodified	_HPLYVDVVL_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.8018676638603	2	527.800217	1053.58588	0.60049	0.00031694	-0.25223	-0.00013313	0.34826	0.00018381	527.8005782737775	58.085	0.43214	59.504	59.29	59.722	1.4181					27	19	2	0	0	0	0.052478	2	24300	24300;24360		67.035	22.628	1	9196200			9906	4455	4807	4830	12101;12102	12101					0.06123217482695509
HPLYVDVVL	9	Unmodified	_HPLYVDVVL_					0	0	0		nc|ENSG00000177663|Q96F46-2|IL17RA;ENSG00000177663|ENST00000319363|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	nc|ENSG00000177663|Q96F46-2|IL17RA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7994262576103	2	527.800217	1053.58588	0.53981	0.00028491	-0.27284	-0.00014401	0.26697	0.00014091	527.8001808929923	57.467	0.37206	59.436	59.281	59.653	1.9684					33	21	2	0	0	0	0.052478	2	24089	24089;24147		67.035	22.628	1	7447300			9907	4455	4807	4830	12103;12104	12103					0.06123217482695509
HPMDLSTVKR	10	Unmodified	_HPMDLSTVKR_					0	0	0		nc|ENSG00000169925|Q15059-2|BRD3;nc|ENSG00000204256|P25440-4|BRD2;ENSG00000169925|ENST00000303407|BRD3;nc|ENSG00000204256|P25440-3|BRD2;ENSG00000204256|ENST00000374825|BRD2;nc|ENSG00000204256|P25440-2|BRD2	nc|ENSG00000169925|Q15059-2|BRD3	nc|ENSG00000169925|Q15059-2|BRD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3190185427666	2	592.31624	1182.61793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.076	1	49.076	48.576	49.576	0								0	0	0	0.66031	1	20490	20490		3.9444	1.6417	1				9908	4121	4808	4831	12105	12105					0.03392261894191506
HPMKRLAQL	9	Unmodified	_HPMKRLAQL_					0	0	0			REV__nc|ENSG00000081913|O60346-2|PHLPP1	REV__nc|ENSG00000081913|O60346-2|PHLPP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.8231689333916	2	547.318586	1092.62262	2.5716	0.0014075	2.6856	0.0014699	5.2572	0.0028774	547.8228811370597	86.611	0.57671	86.855	86.548	87.124	0.24387					41	22	3	0	0	0	0.46905	1	36311	36311		16.942	3.3274	1	4377600	+		9909	8822	4809	4832	12106	12106					0.0800119082762194
HPMKVLFLIP	10	Unmodified	_HPMKVLFLIP_					0	0	0		ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	ENSG00000102572|ENST00000539966|STK24	ENSG00000102572|ENST00000539966|STK24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8591796755791	2	597.857012	1193.69947	2.4494	0.0014644	-0.90275	-0.00053971	1.5467	0.00092468	597.8563077094012	91.803	0.44281	91.803	91.597	92.04	0					31	13	3	0	0	0	0.89646	2	38347	38347;38396		1.8442	0	1	2571400			9910	1395	4810	4833	12107;12108	12107					0.11036989324111346
HPMKVLFLIP	10	Unmodified	_HPMKVLFLIP_					0	0	0		ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	ENSG00000102572|ENST00000539966|STK24	ENSG00000102572|ENST00000539966|STK24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8570434451103	2	597.857012	1193.69947	2.5351	0.0015156	-1.1153	-0.00066676	1.4199	0.00084889	597.8560562302796	91.03	0.35714	91.239	90.997	91.354	0.20903					22	10	3	0	0	0	0.89803	1	38122	38122		1.6526	1.1279	1	555210			9911	1395	4810	4833	12109	12109					0.11036989324111346
HPMKVLFLIP	10	Unmodified	_HPMKVLFLIP_					0	0	0		ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	ENSG00000102572|ENST00000539966|STK24	ENSG00000102572|ENST00000539966|STK24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8572875857353	2	597.857012	1193.69947	2.5454	0.0015218	-1.3286	-0.00079432	1.2168	0.00072748	597.8560053830457	91.722	0.38878	91.912	91.723	92.112	0.19042					33	11	4	0	0	0	0.89646	1	38378	38378		1.8442	0	1	2017400			9912	1395	4810	4833	12110	12110					0.11036989324111346
HPMKVLFLIP	10	Unmodified	_HPMKVLFLIP_					0	0	0		ENSG00000102572|ENST00000539966|STK24;nc|ENSG00000102572|Q9Y6E0|STK24	ENSG00000102572|ENST00000539966|STK24	ENSG00000102572|ENST00000539966|STK24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8583251833916	2	597.857012	1193.69947	3.7759	0.0022574	-0.58563	-0.00035012	3.1902	0.0019073	597.8562754785125	90.76	0.35089	92.126	91.929	92.28	1.366					18	10	2	0	0	0	0.89646	2	38200	38200;38247		1.8442	0	1	840560			9913	1395	4810	4833	12111;12112	12111					0.11036989324111346
HPNGNITEL	9	Unmodified	_HPNGNITEL_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7524597048759	2	497.751256	993.487959	0.33989	0.00016918	0.50784	0.00025278	0.84774	0.00042196	497.7514942375846	20.727	0.2008	22.301	22.18	22.38	1.5748					10	6	2	0	0	0	0.30098	1	8616	8616		25.399	5.9603	1	414520			9914	4985	4811	4834	12113	12113					-0.00904591113294373
HPNGNITEL	9	Unmodified	_HPNGNITEL_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.751256	993.487959	0.9406	0.00046819	-1.2586	-0.00062645	-0.31796	-0.00015826	497.75075843626433	21.126	0.23198	22.251	22.102	22.334	1.1254	-0.025173	-0.00097927	NaN	25.399	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793820			9915	4985	4811	4834							-0.00904591113294373
HPNREDIL	8	Unmodified	_HPNREDIL_					0	0	0			REV__SCNN1B|p.K282Rfs*14|1|0.06|ENSG00000168447|chr16:23367922-23367922|G/-|frameshift_variant	REV__SCNN1B|p.K282Rfs*14|1|0.06|ENSG00000168447|chr16:23367922-23367922|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2592651247978	2	497.259248	992.503943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.787	1	82.067	81.567	82.567	0.2802								0	0	0	1.0178	1	34197	34197		6.3541	0	1		+		9916	10909	4812	4835	12114	12114					0.007391151236220139
HPNYLGDLIM	10	Unmodified	_HPNYLGDLIM_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000441022.1_1_1:225591007-225592250:-|nuORF;nc|ENSG00000149809|O76062-2|TM7SF2;ENST00000529601.5_1_11:64879444-64883522:+|nuORF;ENSG00000149809|ENST00000279263|TM7SF2;ENST00000530650.5_1_11:64879967-64883522:+|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.7933227419853	2	586.792066	1171.56958	2.6099	0.0015315	-0.61587	-0.00036139	1.9941	0.0011701	586.791839370201	60.066	0.85223	61.486	61.236	62.089	1.4196					64	27	4	0	0	0	0.28905	3	25203	25153;25203;25255		39.95	9.7249	1	4629000			9917	3052	4813	4836	12115;12116;12117	12116					-0.009342317456912497
HPNYLGDLIM	10	Unmodified	_HPNYLGDLIM_					0	0	0		ENSG00000143815|ENST00000272163|LBR;ENST00000441022.1_1_1:225591007-225592250:-|nuORF;nc|ENSG00000149809|O76062-2|TM7SF2;ENST00000529601.5_1_11:64879444-64883522:+|nuORF;ENSG00000149809|ENST00000279263|TM7SF2;ENST00000530650.5_1_11:64879967-64883522:+|nuORF	ENSG00000143815|ENST00000272163|LBR	ENSG00000143815|ENST00000272163|LBR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7925903201103	2	586.792066	1171.56958	2.7996	0.0016428	-0.72524	-0.00042556	2.0744	0.0012172	586.79162594399	59.524	0.75946	61.493	61.286	62.046	1.969					47	24	3	0	0	0	0.16044	3	24998	24952;24998;25044		53.833	11.622	1	4901500			9918	3052	4813	4836	12118;12119;12120	12119					-0.009342317456912497
HPPIRRARRP	10	Unmodified	_HPPIRRARRP_					0	0	0			REV__nc|ENSG00000143674|Q5TCX8-2|MAP3K21	REV__nc|ENSG00000143674|Q5TCX8-2|MAP3K21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	419.2581970095634	3	419.258406	1254.75339	0.87769	0.00036798	-0.6099	-0.00025571	0.26778	0.00011227	419.2582787116295	93.853	0.4102	93.853	93.584	93.994	0					25	12	3	0	0	0	0.89646	1	39232	39232		0.77653	0.078866	1	1094300	+		9919	10220	4814	4837	12121	12121					0.13620342590661494
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5444824099541	3	408.543767	1222.60947	-0.72954	-0.00029805	1.9261	0.00078691	1.1966	0.00048886	408.5446707320336	14.024	1.3925	14.024	13.887	15.28	0					98	44	4	0	0	0	0.846	1	6205	6205		3.8763	0	1	17343000	+		9920	11590	4815	4838	12122	12122					0.0070703124922602
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5440856814384	3	408.543767	1222.60947	0.3977	0.00016248	0.59806	0.00024433	0.99576	0.00040681	408.54407096939843	13.384	0.59533	13.483	13.185	13.78	0.09944					62	18	5	0	0	0	0.846	1	5666	5666		3.8763	0	1	12986000	+		9921	11590	4815	4838	12123	12123					0.0070703124922602
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5452453494072	3	408.543767	1222.60947	0.42548	0.00017383	0.44518	0.00018188	0.87067	0.00035571	408.54410820128203	13.848	1.1511	13.947	13.78	14.931	0.099441					68	36	4	0	0	0	0.87699	1	5819	5819		1.9064	0	1	3050000	+		9922	11590	4815	4838	12124	12124					0.0070703124922602
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5439025759697	3	408.543767	1222.60947	-0.41577	-0.00016986	1.1297	0.00046155	0.71397	0.00029169	408.54427750083966	12.999	0.56661	13.725	13.473	14.04	0.72639					54	17	4	0	0	0	0.81324	1	5476	5476		6.1918	0.78914	1	8421300	+		9923	11590	4815	4838	12125	12125					0.0070703124922602
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5456420779228	3	408.543767	1222.60947	-0.3541	-0.00014466	0.60627	0.00024769	0.25217	0.00010302	408.5441329084293	13.464	0.46385	14.19	14.008	14.472	0.72639					32	14	3	0	0	0	0.846	2	5644	5541;5644		3.8763	0	1	1858000	+		9924	11590	4815	4838	12126;12127	12127					0.0070703124922602
HPPNIQQFDK	10	Unmodified	_HPPNIQQFDK_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5453063845634	3	408.543767	1222.60947	0.052114	2.1291E-05	0.55094	0.00022509	0.60306	0.00024638	408.54407963870585	13.254	0.43885	14.082	13.903	14.342	0.82789					35	16	3	0	0	0	0.846	1	5475	5475		3.8763	0	1	1252100	+		9925	11590	4815	4838	12128	12128					0.0070703124922602
HPPPTKLKT	9	Unmodified	_HPPPTKLKT_					0	0	0			REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8061096072197	2	509.805834	1017.59712	2.4598	0.001254	-2.3563	-0.0012013	0.10345	5.2741E-05	509.8047462228799	80.742	0.39948	82.438	82.272	82.671	1.6959					25	12	3	0	0	0	0.75267	1	33881	33881		5.2307	2.3415	1	1464900	+		9926	9345	4816	4839	12129	12129					0.08902039576844345
HPPPTKLKT	9	Unmodified	_HPPPTKLKT_					0	0	0			REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	509.805834	1017.59712	2.3305	0.0011881	-3.6684	-0.0018702	-1.3379	-0.00068208	509.80371967341677	82.144	0.66705	82.144	81.701	82.368	0	-0.14314	-0.0005455	NaN	5.2307	41	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3248300	+		9927	9345	4816	4839							0.08902039576844345
HPPPTKLKT	9	Unmodified	_HPPPTKLKT_					0	0	0			REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.805834	1017.59712	2.3155	0.0011804	-3.3704	-0.0017182	-1.0549	-0.0005378	509.80379789578944	81.946	0.73679	82.226	81.722	82.459	0.2802	-0.061028	-0.00024163	NaN	5.2307	49	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3485600	+		9928	9345	4816	4839							0.08902039576844345
HPPPTKLKT	9	Unmodified	_HPPPTKLKT_					0	0	0			REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	REV__ENST00000474983.5_1_6:10529144-10530083:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	509.805834	1017.59712	2.4598	0.001254	-2.3563	-0.0012013	0.10345	5.2741E-05	509.8047462228799	80.742	0.39948	82.438	82.272	82.671	1.6959	0.15077	0.00079233	NaN	5.2307	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1464900	+		9929	9345	4816	4839							0.08902039576844345
HPPSSIELC	9	Unmodified	_HPPSSIELC_					0	0	0			REV__ENST00000406961.5_1_2:24991652-24991949:+|nuORF	REV__ENST00000406961.5_1_2:24991652-24991949:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1604797244072	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.968	1	18.141	17.641	18.641	0.17285								0	0	0	0.42693	1	7457	7457		2.9952	0	1		+		9930	12905	4817	4840	12130	12130					-0.03250451733947557
HPQAPRAA	8	Unmodified	_HPQAPRAA_					0	0	0			REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	424.2302429080009	2	424.230294	846.446034	2.0246	0.0008589	-2.7166	-0.0011525	-0.69203	-0.00029358	424.2292577624587	71.697	0.28307	72.021	71.848	72.132	0.32359					13	8	2	0	0	0	0.88587	1	30015	30015		5.2307	0	1	895950	+		9931	12636	4818	4841	12131	12131					0.01666897988832261
HPQAPRAA	8	Unmodified	_HPQAPRAA_					0	0	0			REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	424.230294	846.446034	0.82949	0.0003519	-3.5257	-0.0014957	-2.6962	-0.0011438	424.22883977628754	71.918	0.25249	71.918	71.764	72.016	0	-0.13037	-0.00035351	NaN	5.2307	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1004200	+		9932	12636	4818	4841							0.01666897988832261
HPQAPRAA	8	Unmodified	_HPQAPRAA_					0	0	0			REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	424.230294	846.446034	2.0246	0.0008589	-2.7166	-0.0011525	-0.69203	-0.00029358	424.2292577624587	71.697	0.28307	72.021	71.848	72.132	0.32359	-0.027391	0.0003329	NaN	5.2307	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	895950	+		9933	12636	4818	4841							0.01666897988832261
HPQAPRAA	8	Unmodified	_HPQAPRAA_					0	0	0			REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	REV__ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	424.230294	846.446034	2.9632	0.0012571	-4.3888	-0.0018619	-1.4256	-0.00060478	424.2282117784422	70.853	0.25077	72.206	72.033	72.284	1.3536	0.15776	-0.0010859	NaN	5.2307	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749460	+		9934	12636	4818	4841							0.01666897988832261
HPQKGKRTGS	10	Unmodified	_HPQKGKRTGS_					0	0	0			REV__nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	REV__nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3064453005791	2	548.304521	1094.59449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.33	1	104.49	103.99	104.99	0.16055								0	0	0	0.65836	1	44165	44165		6.7232	1.4925	1		+		9935	10390	4819	4842	12132	12132					0.05097584171903691
HPQKVGMEMEQ	11	Unmodified	_HPQKVGMEMEQ_					0	0	0			REV__ENSG00000159433|ENST00000290607|STARD9	REV__ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.5372802615166	3	438.537407	1312.59039	0.17478	7.6649E-05	-1.0695	-0.00046903	-0.89476	-0.00039238	438.53714955221477	15.197	0.46771	15.197	15.061	15.528	0					31	14	4	0	0	0	0.94603	1	6306	6306		7.0371	1.2537	1	1861600	+		9936	10573	4820	4843	12133	12133					-0.05340009428346093
HPQLGTCSV	9	Unmodified	_HPQLGTCSV_					0	0	0		ENST00000484115.5_1_3:49043105-49043375:+|nuORF;ENST00000472301.5_1_3:49043105-49044337:+|nuORF;nc|ENSG00000178467|Q9NXG6-3|P4HTM	ENST00000484115.5_1_3:49043105-49043375:+|nuORF	ENST00000484115.5_1_3:49043105-49043375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2319213747978	2	471.229102	940.443651	3.8103	0.0017955	-0.071979	-3.3919E-05	3.7383	0.0017616	471.2292961874933	81.746	0.40211	82.98	82.78	83.182	1.2332					46	12	6	0	0	0	0.57699	1	34288	34288		7.9102	2.1497	1	3418300			9937	6748	4821	4844	12134	12134					-0.02895318531113844
HPQPECSEVKK	11	Unmodified	_HPQPECSEVKK_					0	0	0			REV__ENST00000491434.5_1_1:32681819-32682014:-|nuORF	REV__ENST00000491434.5_1_1:32681819-32682014:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.8799926638603	3	427.88005	1280.61832	0.69009	0.00029528	-1.0443	-0.00044683	-0.35419	-0.00015155	427.8792832732395	15.612	0.56687	15.743	15.335	15.902	0.13022					27	17	3	0	0	0	0.95983	1	6482	6482		2.8433	0	1	608120	+		9938	13430	4822	4845	12135	12135					-0.01076363176639461
HPQRRKKRK	9	Unmodified	_HPQRRKKRK_					0	0	0		ENST00000545653.5_1_5:39393468-39394400:-|nuORF	ENST00000545653.5_1_5:39393468-39394400:-|nuORF	ENST00000545653.5_1_5:39393468-39394400:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	617.3920165896416	2	617.391796	1232.76904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.15	1	108.15	107.65	108.65	0								0	0	0	0.42693	1	46539	46539		2.3027	0.82083	1				9939	7237	4823	4846	12136	12136					0.16196629107730587
HPQYEVVEI	9	Unmodified	_HPQYEVVEI_					0	0	0		nc|ENSG00000064419|Q9Y5L0-3|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7856323122978	2	557.282389	1112.55022	0.78843	0.00043938	-0.68553	-0.00038203	0.1029	5.7344E-05	557.2816111944609	37.886	0.17955	39.706	39.579	39.759	1.8202					12	5	3	0	0	0	0.15635	1	15883	15883		37.974	5.6685	1	1345400			9940	772;7828	4824	4847	12137	12137					-0.001548647649542545
HPQYEVVEI	9	Unmodified	_HPQYEVVEI_					0	0	0		nc|ENSG00000064419|Q9Y5L0-3|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	557.282389	1112.55022	1.6559	0.00092281	-0.55394	-0.0003087	1.102	0.00061411	557.2822773264802	38.506	0.24363	39.802	39.651	39.895	1.2961	0.047934	4.0543E-05	NaN	37.974	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1465200			9941	772;7828	4824	4847							-0.001548647649542545
HPRANVPQWW	10	Unmodified	_HPRANVPQWW_					0	0	0		ENST00000078429.8_1_19:3123337-3123766:+|nuORF	ENST00000078429.8_1_19:3123337-3123766:+|nuORF	ENST00000078429.8_1_19:3123337-3123766:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884155154228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.469	1	73.469	72.969	73.969	0								0	0	0	0.66254	1	30590	30590		0.15932	0	1				9942	5500	4825	4848	12138	12138					0.00853863442898728
HPRPRQNK	8	Unmodified	_HPRPRQNK_					0	0	0		chr3:194487172-194487456|390|16.56|0.0|20.66|+|1|ATP13A3-DT,ATP13A3-DT|1	chr3:194487172-194487456|390|16.56|0.0|20.66|+|1|ATP13A3-DT,ATP13A3-DT|1	chr3:194487172-194487456|390|16.56|0.0|20.66|+|1|ATP13A3-DT,ATP13A3-DT|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7933227419853	2	516.794124	1031.57369	2.0507	0.0010598	-1.3023	-0.00067302	0.74841	0.00038678	516.7935468233288	83.553	0.75687	84.741	84.326	85.083	1.1879					54	23	4	0	0	0	0.88958	1	35064	35064		2.8892	0	1	5773900			9943	260	4826	4849	12139	12139					0.05917038582879286
HPRVKRDKA	9	Unmodified	_HPRVKRDKA_					0	0	0		nc|ENSG00000132164|P48066-2|SLC6A11;ENSG00000132164|ENST00000254488|SLC6A11	nc|ENSG00000132164|P48066-2|SLC6A11	nc|ENSG00000132164|P48066-2|SLC6A11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8336669802666	2	553.830706	1105.64686	2.5515	0.0014131	0.82269	0.00045563	3.3742	0.0018687	553.8309887703023	87.48	0.51859	87.715	87.46	87.978	0.23496					43	16	4	0	0	0	0.83753	1	36638	36638		1.8442	0	1	5731100			9944	2515	4827	4850	12140	12140					0.09826167305527633
HPSCCCTV	8	Unmodified	_HPSCCCTV_					0	0	0		nc|ENSG00000100422|Q8TCT0-2|CERK;ENSG00000100422|ENST00000216264|CERK	nc|ENSG00000100422|Q8TCT0-2|CERK	nc|ENSG00000100422|Q8TCT0-2|CERK	MSMS	GG20161007_CRH_Patient100_W632_02	4	425.1570007205009	2	425.156234	848.297915	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.9	1	104.07	103.57	104.57	0.1731								0	0	0	1.0178	1	43860	43860		4.756	0	1				9945	1277	4828	4851	12141	12141					-0.13230240643190427
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3313476443291	2	540.332216	1078.64988	2.2608	0.0012216	-2.7776	-0.0015008	-0.51685	-0.00027927	540.3307221851405	84.586	0.59726	84.586	84.151	84.749	0					25	18	2	0	0	0	0.82604	1	35238	35238		2.3027	0	1	1196200	+		9946	14748	4829	4852	12142	12142					0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3324462771416	2	540.332216	1078.64988	2.5161	0.0013595	-2.1205	-0.0011458	0.39558	0.00021375	540.331120381793	84.366	0.6058	84.627	84.248	84.854	0.26083					32	18	3	0	0	0	0.82604	1	35274	35274		2.3027	0.4585	1	1298700	+		9947	14748	4829	4852	12143	12143					0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3315307497978	2	540.332216	1078.64988	1.8837	0.0010178	-1.9104	-0.0010323	-0.02668	-1.4416E-05	540.3309565093142	84.446	0.28449	85.605	85.402	85.687	1.159					18	8	3	0	0	0	0.75267	1	35409	35409		5.2307	3.3864	1	2965800	+		9948	14748	4829	4852	12144	12144					0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3308593630791	2	540.332216	1078.64988	2.2288	0.0012043	-2.6362	-0.0014244	-0.40743	-0.00022015	540.3309522306506	84.215	0.37144	85.814	85.52	85.891	1.5991					20	11	3	0	0	0	0.75267	1	35303	35303		5.2307	2.9279	1	2672900	+		9949	14748	4829	4852	12145	12145					0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	540.332216	1078.64988	2.2608	0.0012216	-2.7776	-0.0015008	-0.51685	-0.00027927	540.3307221851405	84.586	0.59726	84.586	84.151	84.749	0	-0.020598	-0.00035295	NaN	2.3027	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1196200	+		9950	14748	4829	4852							0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	540.332216	1078.64988	1.8837	0.0010178	-1.9104	-0.0010323	-0.02668	-1.4416E-05	540.3309565093142	84.446	0.28449	85.605	85.402	85.687	1.159	0.065354	0.0014576	NaN	5.2307	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2965800	+		9951	14748	4829	4852							0.11369997639667417
HPSKKLKEL	9	Unmodified	_HPSKKLKEL_					0	0	0			REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	REV__tr|A0A553SGH2|A0A553SGH2_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_10820PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	540.332216	1078.64988	2.2288	0.0012043	-2.6362	-0.0014244	-0.40743	-0.00022015	540.3309522306506	84.215	0.37144	85.814	85.52	85.891	1.5991	0.27449	0.00067329	NaN	5.2307	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2672900	+		9952	14748	4829	4852							0.11369997639667417
HPSPPSHWK	9	Unmodified	_HPSPPSHWK_					0	0	0			REV__ENST00000497493.1_1_21:38599661-38600668:-|nuORF	REV__ENST00000497493.1_1_21:38599661-38600668:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	358.2064697146416	3	358.182281	1071.52501	0.10281	3.6826E-05	0.84829	0.00030384	0.95111	0.00034067	358.18330135353295	22.199	0.24907	23.815	23.641	23.89	1.6158					12	7	2	0	0	0	0.11645	1	9253	9253		2.7352	0	1	573110	+		9953	13479	4830	4853	12146	12146					-0.007888747768674875
HPSVPQRA	8	Unmodified	_HPSVPQRA_					0	0	0		ENST00000368787.3_1_1:152552252-152552420:-|nuORF	ENST00000368787.3_1_1:152552252-152552420:-|nuORF	ENST00000368787.3_1_1:152552252-152552420:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	446.1209289431572	2	446.243401	890.472249	1.633	0.00072872	-4.4498	-0.0019857	-2.8168	-0.001257	446.2410388178388	74.895	0.28169	74.895	74.777	75.059	0					13	8	2	0	0	0	2.3239	1	31214	31214		0	0	1	653500			9954	6089	4831	4854	12147	12147					0.022631671603221548
HPSWLISCV	9	Unmodified	_HPSWLISCV_					0	0	0			REV__ENSG00000117399|ENST00000310955|CDC20	REV__ENSG00000117399|ENST00000310955|CDC20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2631713747978	2	521.262945	1040.51134	2.5581	0.0013334	1.573	0.00081997	4.1311	0.0021534	521.2639746836148	44.395	0.35439	45.76	45.545	45.9	1.3653					46	10	6	0	0	0	0.1735	1	18635	18635		36.044	11.37	1	18984000	+		9955	9498	4832	4855	12148	12148					-0.007298686003196053
HPSWLISCV	9	Unmodified	_HPSWLISCV_					0	0	0			REV__ENSG00000117399|ENST00000310955|CDC20	REV__ENSG00000117399|ENST00000310955|CDC20	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.2928954958916	2	521.262945	1040.51134	2.5581	0.0013334	1.573	0.00081997	4.1311	0.0021534	521.2639746836148	44.395	0.35439	45.76	45.545	45.9	1.3653					46	10	6	0	0	0	0.054363	1	18637	18637		36.044	11.37	1	18984000	+		9956	9498	4832	4855	12149	12149					-0.007298686003196053
HPSWLISCV	9	Unmodified	_HPSWLISCV_					0	0	0			REV__ENSG00000117399|ENST00000310955|CDC20	REV__ENSG00000117399|ENST00000310955|CDC20	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.2911865115166	2	521.262945	1040.51134	2.1203	0.0011052	1.5386	0.00080203	3.659	0.0019073	521.2641672977818	43.749	0.43874	45.693	45.455	45.893	1.9438					49	13	6	0	0	0	0.040432	1	18392	18392		42.095	20.348	1	15062000	+		9957	9498	4832	4855	12150	12150					-0.007298686003196053
HPTGLVAPKV	10	Unmodified	_HPTGLVAPKV_					0	0	0			REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	REV__nc|ENSG00000162437|Q9HCJ3-2|RAVER2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8059570193291	2	509.805834	1017.59712	2.3155	0.0011804	-3.3704	-0.0017182	-1.0549	-0.0005378	509.80379789578944	81.946	0.73679	82.226	81.722	82.459	0.2802					49	23	3	0	0	0	0.87343	1	34194	34194		4.3292	0	1	3485600	+		9958	10646	4833	4856	12151	12151					0.08902039576844345
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7648193240166	2	515.763832	1029.51311	0.42377	0.00021856	0.58817	0.00030336	1.0119	0.00052192	515.7638816986339	36.895	0.28917	38.171	37.945	38.234	1.2762					29	15	2	0	0	0	0.031324	2	15474	15428;15474		85.357	37.011	1	5229200			9959	1923	4834	4857	12152;12153	12153					-0.00046536310719602625
HPTIISESF	9	Unmodified	_HPTIISESF_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7640869021416	2	515.763832	1029.51311	1.0112	0.00052154	-0.057329	-2.9568E-05	0.95387	0.00049197	515.7635994856658	36.246	0.31204	38.064	37.893	38.205	1.8176					36	20	2	0	0	0	0.031324	2	15187	15148;15187		85.357	49.313	1	5218400			9960	1923	4834	4857	12154;12155	12155					-0.00046536310719602625
HPTLVLPLV	9	Unmodified	_HPTLVLPLV_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;ENSG00000149262|ENST00000534064|INTS4;INTS4-CYP2R1|1|fusion;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-3|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000525268.2_1_11:77612547-77635854:-|nuORF	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.2117492556572	3	330.211177	987.611703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.64	1	21.164	20.664	21.664	1.5237								0	0	0	0.42693	1	8161	8161		1.1933	0	1				9961	7658	4835	4858	12156	12156					0.11740111724998314
HPTLVLPLV	9	Unmodified	_HPTLVLPLV_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;ENSG00000149262|ENST00000534064|INTS4;INTS4-CYP2R1|1|fusion;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-3|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;ENST00000525268.2_1_11:77612547-77635854:-|nuORF	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.2119628787041	3	330.211177	987.611703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.764	1	21.287	20.787	21.787	1.5237								0	0	0	0.42693	1	8214	8214		1.1933	0	1				9962	7658	4835	4858	12157	12157					0.11740111724998314
HPTVFVQHG	9	Unmodified	_HPTVFVQHG_					0	0	0		ENSG00000189357|ENST00000419782|SPATA31D4;ENSG00000186788|ENST00000445385|SPATA31D3	ENSG00000189357|ENST00000419782|SPATA31D4	ENSG00000189357|ENST00000419782|SPATA31D4	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1786682009697	3	341.178648	1020.51411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.57	1	21.793	21.293	22.293	0.223								0	0	0	0.42693	1	8969	8969		2.7352	0	1				9963	4804	4836	4859	12158	12158					0.004677228488617402
HPTVFVQHG	9	Unmodified	_HPTVFVQHG_					0	0	0		ENSG00000189357|ENST00000419782|SPATA31D4;ENSG00000186788|ENST00000445385|SPATA31D3	ENSG00000189357|ENST00000419782|SPATA31D4	ENSG00000189357|ENST00000419782|SPATA31D4	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1803161501884	3	341.178648	1020.51411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.062	1	22.285	21.785	22.785	0.223								0	0	0	0.42693	1	9183	9183		5.2969	2.3016	1				9964	4804	4836	4859	12159	12159					0.004677228488617402
HPTVFVQHG	9	Unmodified	_HPTVFVQHG_					0	0	0		ENSG00000189357|ENST00000419782|SPATA31D4;ENSG00000186788|ENST00000445385|SPATA31D3	ENSG00000189357|ENST00000419782|SPATA31D4	ENSG00000189357|ENST00000419782|SPATA31D4	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1790649294853	3	341.178648	1020.51411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.178	1	22.401	21.901	22.901	0.223								0	0	0	0.42693	1	9235	9235		2.7352	0	1				9965	4804	4836	4859	12160	12160					0.004677228488617402
HPTVFVQHG	9	Unmodified	_HPTVFVQHG_					0	0	0		ENSG00000189357|ENST00000419782|SPATA31D4;ENSG00000186788|ENST00000445385|SPATA31D3	ENSG00000189357|ENST00000419782|SPATA31D4	ENSG00000189357|ENST00000419782|SPATA31D4	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1787292361259	3	341.178648	1020.51411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.296	1	22.519	22.019	23.019	0.223								0	0	0	0.42693	1	9286	9286		1.0715	0	1				9966	4804	4836	4859	12161	12161					0.004677228488617402
HPTWGDEQL	9	Unmodified	_HPTWGDEQL_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7491332888603	2	541.748713	1081.48287	0.90058	0.00048789	0.70256	0.00038061	1.6031	0.0008685	541.7491719552761	29.605	0.42937	30.888	30.734	31.164	1.2825					18	13	2	0	0	0	0.24063	1	12423	12423		28.487	15.955	1	1229100			9967	1183	4837	4860	12162	12162					-0.054608949758858216
HPTWGDEQL	9	Unmodified	_HPTWGDEQL_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7489501833916	2	541.748713	1081.48287	0.8277	0.0004484	0.99508	0.00053908	1.8228	0.00098749	541.7488492187751	29.116	0.42714	30.915	30.747	31.174	1.7987					27	13	3	0	0	0	0.098163	2	12198	12198;12256		49.933	25.912	1	976440			9968	1183	4837	4860	12163;12164	12163					-0.054608949758858216
HPVMMAVPRFL	11	Unmodified	_HPVMMAVPRFL_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2353088259697	3	433.235111	1296.6835	2.1731	0.00094147	-1.9709	-0.00085384	0.20225	8.7622E-05	433.2342050868566	42.552	2.0747	42.872	42.404	44.478	0.32058					126	67	2	0	0	0	0.95983	1	18377	18377		2.8433	0	1	2894600	+		9969	11477	4838	4861	12165	12165					0.04702959815540453
HPVRPMRL	8	Unmodified	_HPVRPMRL_					0	0	0		ENSG00000163661|ENST00000295927|PTX3	ENSG00000163661|ENST00000295927|PTX3	ENSG00000163661|ENST00000295927|PTX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.2908203005791	2	503.292371	1004.57019	2.0944	0.0010541	-0.46796	-0.00023552	1.6264	0.00081857	503.2919555970041	81.842	0.30673	81.842	81.701	82.008	0					28	9	4	0	0	0	0.88958	2	34071	34071;34121		2.8892	0	1	9714900			9970	3711	4839	4862	12166;12167	12166					0.0680865248466489
HPVRPMRL	8	Unmodified	_HPVRPMRL_					0	0	0		ENSG00000163661|ENST00000295927|PTX3	ENSG00000163661|ENST00000295927|PTX3	ENSG00000163661|ENST00000295927|PTX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.2900573611259	2	503.292371	1004.57019	2.5711	0.001294	-0.58668	-0.00029527	1.9845	0.00099877	503.29205722050386	81.734	0.52164	82.015	81.844	82.366	0.2802					39	16	4	0	0	0	0.88958	3	34131	34131;34178;34234		2.8892	0	1	11375000			9971	3711	4839	4862	12168;12169;12170	12168					0.0680865248466489
HPVRQHQG	8	Unmodified	_HPVRQHQG_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2054321169853	3	320.170375	957.489296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.016	1	52.41	51.91	52.91	1.3938								0	0	0	1.0178	1	21359	21359		0.45834	0	1		+		9972	11445	4840	4863	12171	12171					0.008850877661416234
HPYIQYNVL	9	Unmodified	_HPYIQYNVL_					0	0	0		ENSG00000125755|ENST00000245934|SYMPK;SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant;nc|ENSG00000125755|Q92797-2|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8003417849541	2	573.800749	1145.58694	2.0935	0.0012013	-2.1442	-0.0012304	-0.050709	-2.9097E-05	573.799915799551	43.877	0.24506	45.23	45.132	45.377	1.3536					14	7	2	0	0	0	0.34572	1	18397	18397		23.148	10.617	1	1354000			9973	2276	4841	4864	12172	12172					0.01997431851600595
HPYIQYNVL	9	Unmodified	_HPYIQYNVL_					0	0	0		ENSG00000125755|ENST00000245934|SYMPK;SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant;nc|ENSG00000125755|Q92797-2|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8031494021416	2	573.800749	1145.58694	2.0337	0.001167	0.085165	4.8868E-05	2.1189	0.0012158	573.8006940201852	43.267	0.24005	45.211	45.072	45.312	1.9438					13	7	2	0	0	0	0.22519	2	18125	18125;18174		30.225	11.508	1	1465200			9974	2276	4841	4864	12173;12174	12173					0.01997431851600595
HQAQEYETM	9	Unmodified	_HQAQEYETM_					0	0	0		ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENST00000506277.1_1_5:36886275-36886596:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.7384521365166	2	568.737488	1135.46042	2.9224	0.0016621	-0.89539	-0.00050924	2.027	0.0011528	568.7371387405832	82.882	0.36626	84.095	83.92	84.286	1.2125					46	11	5	0	0	0	0.71526	1	34804	34804		6.7232	0	1	6373300			9975	7003	4842	4865	12175	12175					-0.10188862435848023
HQARKLKK	8	Unmodified	_HQARKLKK_					0	0	0		ENSG00000019505|ENST00000020926|SYT13	ENSG00000019505|ENST00000020926|SYT13	ENSG00000019505|ENST00000020926|SYT13	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.7192260622978	3	336.885687	1007.63523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.34	1	38.624	38.124	39.124	1.284								0	0	0	1.0178	1	15675	15675		1.4819	0.51963	1				9976	610	4843	4866	12176	12176					0.13171970282178336
HQECSDCGKTF	11	Unmodified	_HQECSDCGKTF_					0	0	0		ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant;nc|ENSG00000275111|Q9BSG1-3|ZNF2;nc|ENSG00000275111|Q9BSG1-4|ZNF2;ENSG00000275111|ENST00000614034|ZNF2	ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant	ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.7522460818291	2	627.74753	1253.48051	1.9273	0.0012099	2.9869	0.001875	4.9143	0.0030849	627.7495060793045	41.51	0.32058	42.836	42.715	43.035	1.3254					25	9	3	0	0	0	0.93654	1	17412	17412		7.609	0.31972	1	1085500			9977	5458	4844	4867	12177	12177					-0.1360943476754528
HQECSDCGKTF	11	Unmodified	_HQECSDCGKTF_					0	0	0		ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant;nc|ENSG00000275111|Q9BSG1-3|ZNF2;nc|ENSG00000275111|Q9BSG1-4|ZNF2;ENSG00000275111|ENST00000614034|ZNF2	ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant	ZNF2|p.H191Ifs*30|1|0.08|ENSG00000275111|chr2:95181398-95181398|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.2520629763603	2	627.74753	1253.48051	1.46	0.00091652	3.6643	0.0023003	5.1243	0.0032168	627.7500813601176	41.103	0.34736	42.996	42.832	43.179	1.8927					25	10	3	0	0	0	0.93654	1	17226	17226		7.609	1.4032	1	1592200			9978	5458	4844	4867	12178	12178					-0.1360943476754528
HQGVMVGMGQK	11	Unmodified	_HQGVMVGMGQK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.2898437380791	2	586.289168	1170.56378	0.03557	2.0854E-05	1.2506	0.00073319	1.2861	0.00075404	586.2899073560177	14.235	0.15767	15.004	14.932	15.09	0.76937					12	7	2	0	0	0	0.017927	1	5917	5917		100.71	82.336	1	1821400			9979	937	4845	4868	12179	12179					-0.014676535290163883
HQGVMVGMGQK	11	Unmodified	_HQGVMVGMGQK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2835265994072	3	391.195204	1170.56378	-0.55935	-0.00021881	-0.37258	-0.00014575	-0.93192	-0.00036456	391.1951669331505	14.23	0.1745	15	14.915	15.09	0.76937					22	8	3	0	0	0	0.14606	1	5900	5900		9.7643	2.7272	1	3602800			9980	937	4845	4868	12180	12180					-0.014676535290163883
HQGVMVGMGQK	11	Unmodified	_HQGVMVGMGQK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.2866088747978	2	586.289168	1170.56378	0.14533	8.5204E-05	-0.8914	-0.00052262	-0.74607	-0.00043741	586.2888238286171	14.142	0.16494	15.038	14.952	15.117	0.89664					15	6	3	0	0	0	0.038423	1	5854	5854		71.708	54.595	1	1189400			9981	937	4845	4868	12181	12181					-0.014676535290163883
HQGVMVGMGQK	11	Unmodified	_HQGVMVGMGQK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ACTB|p.K238Rfs*46|1|0.21|ENSG00000075624|chr7:5528372-5528372|C/-|frameshift_variant;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000576214.2_1_17:79478712-79479765:-|nuORF;ENST00000462494.5_1_7:5568599-5569288:-|nuORF;ENST00000480297.5_1_10:90700968-90708687:-|nuORF;ENST00000473016.1_1_2:74120109-74129648:+|nuORF;ENST00000488967.5_1_10:90706975-90712518:-|nuORF;ENST00000457622.1_1_6:46172676-46173294:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2836181521416	3	391.195204	1170.56378	-0.020185	-7.8961E-06	-1.3345	-0.00052205	-1.3547	-0.00052995	391.195029096704	14.142	0.21571	15.038	14.924	15.139	0.89664					21	9	4	0	0	0	0.14606	1	5888	5888		6.6235	2.0946	1	4506600			9982	937	4845	4868	12182	12182					-0.014676535290163883
HQIDLIVQL	9	Unmodified	_HQIDLIVQL_					0	0	0		ENST00000472018.5_1_16:89760470-89762097:+|nuORF;ENST00000505733.5_1_16:89758861-89762180:+|nuORF;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.8171264529228	2	539.816399	1077.61824	1.8219	0.0009835	-0.28348	-0.00015303	1.5384	0.00083047	539.8167151655541	63.925	0.37372	63.925	63.832	64.206	0					18	11	2	0	0	0	0.40005	1	26708	26708		20.415	4.5674	1	585980			9983	4741	4846	4869	12183	12183					0.0825400488570267
HQIDLIVQL	9	Unmodified	_HQIDLIVQL_					0	0	0		ENST00000472018.5_1_16:89760470-89762097:+|nuORF;ENST00000505733.5_1_16:89758861-89762180:+|nuORF;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8167602419853	2	539.816399	1077.61824	1.9293	0.0010415	-1.4495	-0.00078247	0.47977	0.00025899	539.8154209366998	63.443	0.43347	63.772	63.535	63.968	0.32899					23	13	2	0	0	0	0.28372	2	26563	26563;26615		26.268	6.8291	1	893060			9984	4741	4846	4869	12184;12185	12184					0.0825400488570267
HQIDLIVQL	9	Unmodified	_HQIDLIVQL_					0	0	0		ENST00000472018.5_1_16:89760470-89762097:+|nuORF;ENST00000505733.5_1_16:89758861-89762180:+|nuORF;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8169433474541	2	539.816399	1077.61824	2.9768	0.0016069	-0.7896	-0.00042624	2.1872	0.0011807	539.8156767553539	62.196	0.44564	63.613	63.365	63.811	1.4177					35	13	3	0	0	0	0.060242	2	26059	26059;26113		63.961	20.102	1	3787800			9985	4741	4846	4869	12186;12187	12186					0.0825400488570267
HQIDLIVQL	9	Unmodified	_HQIDLIVQL_					0	0	0		ENST00000472018.5_1_16:89760470-89762097:+|nuORF;ENST00000505733.5_1_16:89758861-89762180:+|nuORF;nc|ENSG00000185324|Q15131-4|CDK10;nc|ENSG00000185324|Q15131-3|CDK10;nc|ENSG00000185324|Q15131-7|CDK10;nc|ENSG00000185324|Q15131-2|CDK10;ENSG00000185324|ENST00000353379|CDK10	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	ENST00000472018.5_1_16:89760470-89762097:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8175536990166	2	539.816399	1077.61824	2.6334	0.0014215	-1.8721	-0.0010106	0.76123	0.00041092	539.8161264720868	61.593	0.78631	63.55	63.305	64.091	1.9571					55	24	3	0	0	0	0.060242	2	25873	25821;25873		63.961	20.102	1	3188200			9986	4741	4846	4869	12188;12189	12189					0.0825400488570267
HQIIKRRLRTK	11	Unmodified	_HQIIKRRLRTK_					0	0	0		nc|ENSG00000138182|Q96Q89-5|KIF20B;nc|ENSG00000138182|Q96Q89-3|KIF20B;ENSG00000138182|ENST00000371728|KIF20B;nc|ENSG00000138182|Q96Q89-2|KIF20B	nc|ENSG00000138182|Q96Q89-5|KIF20B	nc|ENSG00000138182|Q96Q89-5|KIF20B	MSMS	GG20161007_CRH_Patient100_A02_02	2	724.9682494997978	2	724.967868	1447.92118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.104	1	33.399	32.899	33.899	0.29431								0	0	0	0.63775	1	13902	13902		2.7352	1.0826	1				9987	2822	4847	4870	12190	12190					0.21513985064598273
HQKKGKTK	8	Unmodified	_HQKKGKTK_					0	0	0		tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	tr|A0A553SMG1|A0A553SMG1_NIACIRhamnogalacturonanlyaseOS=NialliacirculansOX=1397GN=CEQ21_22500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	477.7964965701103	2	477.795801	953.577048	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.25	1	104.31	103.81	104.81	0.059502								0	0	0	1.0178	1	43921	43921		2.0598	0	1				9988	16377	4848	4871	12191	12191					0.09840288636905825
HQPHLHTTDPR	11	Unmodified	_HQPHLHTTDPR_					0	0	0			REV__nc|ENSG00000166889|Q86TB9-2|PATL1	REV__nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	446.8933288455009	3	446.89357	1337.65888	-0.11961	-5.3454E-05	0.37764	0.00016877	0.25803	0.00011531	446.89378039860804	11.453	0.37868	12.122	11.95	12.328	0.66934					25	11	3	0	0	0	0.6971	1	4762	4762		14.838	0	1	12200000	+		9989	10846	4849	4872	12192	12192					0.0035573925799781136
HQPQPQQPQ	9	Unmodified	_HQPQPQQPQ_					0	0	0		RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENST00000307403.6_1_7:155532339-155538302:+|nuORF	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2534973025322	3	363.180828	1086.52066	2.1044	0.00076426	0.54468	0.00019782	2.649	0.00096208	363.18099481873605	75.954	0.12709	76.276	76.176	76.303	0.32163					6	3	2	0	0	0	0.11916	1	31747	31747		0.96228	0.75542	1	258540			9990	4713;5783	4850	4873	12193	12193					-0.01914383990447277
HQPQPQQPQ	9	Unmodified	_HQPQPQQPQ_					0	0	0		RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENSG00000184863|ENST00000401878|RBM33;ENST00000307403.6_1_7:155532339-155538302:+|nuORF	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant;ENST00000307403.6_1_7:155532339-155538302:+|nuORF	RBM33|p.A828Pfs*51|1|0.12|ENSG00000184863|chr7:155745104-155745105|-/CCCTTGTGCCCACTATCCCCCTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2536804080009	3	363.180828	1086.52066	2.5472	0.00092508	1.3748	0.0004993	3.922	0.0014244	363.18065725822294	74.405	0.31945	76.201	76.051	76.371	1.7962					15	9	2	0	0	0	0.11916	1	31186	31186		0.96228	0.33545	1	855550			9991	4713;5783	4850	4873	12194	12194					-0.01914383990447277
HQQRKKKSK	9	Unmodified	_HQQRKKKSK_					0	0	0			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3581420779228	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.85019	1	31672	31672		0.52476	0.066424	1	7390500	+		9992	10615	4851	4874	12195	12195					0.12294125368293862
HQRLRRWLG	9	Unmodified	_HQRLRRWLG_					0	0	0		ENST00000262304.8_1_16:2141877-2142581:-|nuORF	ENST00000262304.8_1_16:2141877-2142581:-|nuORF	ENST00000262304.8_1_16:2141877-2142581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3593627810478	2	611.357422	1220.70029	1.8236	0.0011148	-1.212	-0.00074094	0.61159	0.0003739	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.83213	1	33156	33156		2.0598	0.86641	1	5176900			9993	5635	4852	4875	12196	12196					0.09876964808040611
HQRRGTHSRGR	11	Unmodified	_HQRRGTHSRGR_					0	0	0		ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.9121276736259	3	449.911958	1346.71404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1312	1	6.1312	5.6312	6.6312	0								0	0	0	0.63775	1	2518	2518		0	0	1				9994	5297	4853	4876	12197	12197					0.054555905691586304
HQRRGTHSRGR	11	Unmodified	_HQRRGTHSRGR_					0	0	0		ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9112121462822	3	449.911958	1346.71404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7479	1	4.3715	3.8715	4.8715	0.62362								0	0	0	0.63775	1	1547	1547		0	0	1				9995	5297	4853	4876	12198	12198					0.054555905691586304
HQRRGTHSRGR	11	Unmodified	_HQRRGTHSRGR_					0	0	0		ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9122497439384	3	449.911958	1346.71404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7052	1	8.3323	7.8323	8.8323	0.62713								0	0	0	0.63775	1	3189	3189		0	0	1				9996	5297	4853	4876	12199	12199					0.054555905691586304
HQRRGTHSRGR	11	Unmodified	_HQRRGTHSRGR_					0	0	0		ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	ENSG00000226763|ENST00000417606|SRRM5	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9130737185478	3	449.911958	1346.71404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1182	1	7.8489	7.3489	8.3489	0.73074								0	0	0	0.63775	1	2956	2956		0	0	1				9997	5297	4853	4876	12200	12200					0.054555905691586304
HQRRQRRGRLL	11	Unmodified	_HQRRQRRGRLL_					0	0	0			REV__ENST00000268296.8_1_16:31373430-31374502:+|nuORF	REV__ENST00000268296.8_1_16:31373430-31374502:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.6374084353447	3	492.634536	1474.88178	3.2872	0.0016194	0.41141	0.00020268	3.6987	0.0018221	492.63459499693073	88.807	1.3038	89.03	88.375	89.679	0.22359					105	40	3	0	0	0	1.0393	1	37186	37186		0.094841	0	1	2745400	+		9998	12225	4854	4877	12201	12201					0.1633327783376899
HQTSHVYMP	9	Unmodified	_HQTSHVYMP_					0	0	0		nc|ENSG00000055208|Q9NYJ8-2|TAB2;ENSG00000055208|ENST00000637181|TAB2	nc|ENSG00000055208|Q9NYJ8-2|TAB2	nc|ENSG00000055208|Q9NYJ8-2|TAB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	367.1736938357353	3	367.171164	1098.49166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.397	1	92.379	91.879	92.879	0.98157								0	0	0	0.42693	1	38494	38494		0.96228	0.18574	1				9999	720	4855	4878	12202	12202					-0.05364244611087088
HQVIASTLS	9	Unmodified	_HQVIASTLS_					0	0	0		ENSG00000070731|ENST00000225276|ST6GALNAC2	ENSG00000070731|ENST00000225276|ST6GALNAC2	ENSG00000070731|ENST00000225276|ST6GALNAC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	478.2662841677666	2	478.263999	954.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.86	1	104.91	104.41	105.41	0.056801								0	0	0	0.42693	1	44326	44326		1.8442	0	1				10000	860	4856	4879	12203	12203					0.03436883409153779
HQVRDVRKL	9	Unmodified	_HQVRDVRKL_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	575.2927123904228	2	575.843813	1149.67307	2.4428	0.0014067	-1.0723	-0.00061749	1.3705	0.00078921	575.8429155797212	74.786	2.1061	75.11	74.169	76.275	0.32463					197	66	4	0	0	0	0.11684	1	31030	31030		7.9102	3.9658	1	9924500			10001	5370	4857	4880	12204	12204					0.10422436476983421
HQVRDVRKL	9	Unmodified	_HQVRDVRKL_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	575.2932006716728	2	575.843813	1149.67307	2.8416	0.0016363	0.22342	0.00012865	3.065	0.001765	575.8437846930709	72.328	0.92616	73.657	73.455	74.381	1.3297					52	29	2	0	0	0	0.11463	1	30634	30634		12.532	1.7076	1	976930			10002	5370	4857	4880	12205	12205					0.10422436476983421
HQVRDVRKL	9	Unmodified	_HQVRDVRKL_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	575.843813	1149.67307	2.692	0.0015502	-0.26966	-0.00015528	2.4224	0.0013949	575.8427358711272	72.065	0.67376	73.888	73.601	74.275	1.824	0.20537	0.00056404	NaN	12.532	38	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1121800			10003	5370	4857	4880							0.10422436476983421
HQWCQCEECQ	10	Unmodified	_HQWCQCEECQ_					0	0	0			REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	647.2241088747978	2	647.225907	1292.43726	3.2139	0.0020801	-2.2704	-0.0014694	0.94355	0.00061069	647.2245550320852	98.456	0.17329	98.712	98.592	98.765	0.25636					13	5	3	0	0	0	0.88579	1	41418	41418		2.9952	1.3426	1	11560000	+		10004	8567	4858	4881	12206	12206					-0.19725947816436928
HQYRTDFAHK	10	Unmodified	_HQYRTDFAHK_					0	0	0			REV__ENST00000553480.1_1_14:45332201-45332396:-|nuORF	REV__ENST00000553480.1_1_14:45332201-45332396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8828918337822	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3894	1	3.0235	2.5235	3.5235	0.63417								0	0	0	0.66255	1	982	982		0.13989	0	1		+		10005	10324	4859	4882	12207	12207					-0.012230481449705621
HRAARARGLTR	11	Unmodified	_HRAARARGLTR_					0	0	0		nc|ENSG00000198711|Q7Z2R9|SSBP3-AS1	nc|ENSG00000198711|Q7Z2R9|SSBP3-AS1	nc|ENSG00000198711|Q7Z2R9|SSBP3-AS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5887634158134	3	422.253433	1263.73847	1.0196	0.00043053	3.0261	0.0012778	4.0457	0.0017083	422.2550698892577	93.304	0.8219	93.304	92.984	93.805	0					57	25	3	0	0	0	1.0224	1	38957	38957		2.4348	0.18206	1	1816300			10006	7970	4860	4883	12208	12208					0.11714850722682968
HRCHRRRDRKQ	11	Unmodified	_HRCHRRRDRKQ_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1548.085986316204	1	1547.83089	1546.82361	-0.3822	-0.00059158	0.58883	0.00091141	0.20663	0.00031983	1547.830571509042	37.04	0.17096	38.857	38.752	38.923	1.8176					10	6	2	0	0	0	0.14606	1	15521	15521		1.3295	0	1	1493900			10007	3210	4861	4884	12209	12209					0.07207272916821239
HREEEALYLH	10	Unmodified	_HREEEALYLH_					0	0	0			REV__ENST00000552606.1_1_12:82750710-82752155:-|nuORF	REV__ENST00000552606.1_1_12:82750710-82752155:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	432.8857604861259	3	432.882559	1295.62585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.403	1	49.733	49.233	50.233	0.33019								0	0	0	0.66218	1	20706	20706		0.77653	0.078866	1		+		10008	9884	4862	4885	12210	12210					-0.010138875846678275
HREWKIVRIKK	11	Unmodified	_HREWKIVRIKK_					0	0	0		tr|A0A553SFW3|A0A553SFW3_NIACIUncharacterizedproteinYhaNAAAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09590PE=4SV=1	tr|A0A553SFW3|A0A553SFW3_NIACIUncharacterizedproteinYhaNAAAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09590PE=4SV=1	tr|A0A553SFW3|A0A553SFW3_NIACIUncharacterizedproteinYhaNAAAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09590PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.0999328494072	4	373.986035	1491.91504	-0.88137	-0.00032962	0.48211	0.0001803	-0.39925	-0.00014931	373.9858174473908	32.913	0.21855	32.913	32.782	33.001	0					14	6	3	0	0	0	0.14606	1	13749	13749		0	0	1	1151300			10009	16082	4863	4886	12211	12211					0.18875466833105747
HRFQWYFLHEC	11	Unmodified	_HRFQWYFLHEC_					0	0	0			REV__ENSG00000273079|ENST00000609686|GRIN2B	REV__ENSG00000273079|ENST00000609686|GRIN2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.9096557497978	3	522.575072	1564.70339	2.1546	0.0011259	-0.48486	-0.00025338	1.6698	0.00087257	522.5747552581768	45.51	3.0986	45.51	45.155	48.254	0					211	98	3	0	0	0	1.0362	6	19154	19154;19203;19244;19293;19380;19436		1.3296	0	1	2880400	+		10010	12010	4864	4887	12212;12213;12214;12215;12216;12217	12212					-0.05637572920113598
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.1797057986259	4	405.257511	1617.00094	1.8883	0.00076527	-3.7967	-0.0015386	-1.9084	-0.00077338	405.2561109754433	47.059	0.61872	47.389	47.077	47.696	0.33034					27	19	2	0	0	0	0.14606	1	19804	19804		0	0	1	839960	+		10011	12276	4865	4888	12218	12218					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.1792175173759	4	405.257511	1617.00094	1.8919	0.00076669	-4.2487	-0.0017218	-2.3569	-0.00095514	405.2561858781037	46.647	0.52842	46.977	46.736	47.265	0.33034					22	17	2	0	0	0	0.14606	1	19623	19623		0	0	1	743390	+		10012	12276	4865	4888	12219	12219					0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	405.257511	1617.00094	1.931	0.00078257	-3.8237	-0.0015496	-1.8926	-0.000767	405.25606400236074	45.215	0.86047	46.58	46.401	47.262	1.3653	-0.24309	0.0004534	NaN	0	35	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	954540	+		10013	12276	4865	4888							0.21711909301825472
HRGRRRRRRRR	11	Unmodified	_HRGRRRRRRRR_					0	0	0			REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	REV__ENST00000288502.8_2_9:117373626-117379440:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	405.257511	1617.00094	1.7227	0.00069813	-4.3546	-0.0017647	-2.6319	-0.0010666	405.25594138704463	44.952	0.91599	46.912	46.544	47.46	1.9596	0.088849	-0.00040723	NaN	0	45	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1282700	+		10014	12276	4865	4888							0.21711909301825472
HRGRVLHL	8	Unmodified	_HRGRVLHL_					0	0	0		chr5:55114318-55119801|209|24.36|0.18|7.07|-|2|CDC20B,CDC20B|1;nc|ENSG00000164287|Q86Y33-3|CDC20B;chr5:55119918-55124803|156|10.71|0.14|6.29|-|ENST00000322374|CDC20B,CDC20B;nc|ENSG00000164287|Q86Y33-2|CDC20B;chr5:55114318-55119813|210|23.03|0.17|7.11|-|ENST00000296733|CDC20B,CDC20B;ENSG00000164287|ENST00000381375|CDC20B	chr5:55114318-55119801|209|24.36|0.18|7.07|-|2|CDC20B,CDC20B|1	chr5:55114318-55119801|209|24.36|0.18|7.07|-|2|CDC20B,CDC20B|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3016235232353	2	494.301585	986.588616	2.7054	0.0013373	-2.1036	-0.0010398	0.60175	0.00029744	494.3004961644446	81.37	1.223	81.661	81.276	82.499	0.29056					97	39	5	0	0	0	0.89178	1	34020	34020		0.69038	0.69038	1	155540000			10015	269	4866	4889	12220	12220					0.09478530450894596
HRILDSSGR	9	Unmodified	_HRILDSSGR_					0	0	0			REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.7852050662041	2	520.783422	1039.55229	1.469	0.00076502	0.89477	0.00046598	2.3638	0.001231	520.7842527825647	101.08	0.15312	101.08	100.97	101.12	0					8	4	3	0	0	0	0.83753	1	42322	42322		1.8442	0	1	3142600	+		10016	11299	4867	4890	12221	12221					0.03409608763513461
HRILDSSGR	9	Unmodified	_HRILDSSGR_					0	0	0			REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	520.783422	1039.55229	1.469	0.00076502	0.89477	0.00046598	2.3638	0.001231	520.7842527825647	101.08	0.15312	101.08	100.97	101.12	0	-0.016824	-0.00052563	NaN	1.8442	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3142600	+		10017	11299	4867	4890							0.03409608763513461
HRILDSSGR	9	Unmodified	_HRILDSSGR_					0	0	0			REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	REV__ENST00000399604.4_1_17:5084193-5085186:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	520.783422	1039.55229	2.9179	0.0015196	1.7392	0.00090576	4.6571	0.0024253	520.7848831875084	101.04	0.12484	101.11	101.03	101.15	0.067009	0.016824	0.00035393	NaN	1.8442	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2951100	+		10018	11299	4867	4890							0.03409608763513461
HRKREKRVYV	10	Unmodified	_HRKREKRVYV_					0	0	0			REV__nc|ENSG00000183495|Q96L91-4|EP400	REV__nc|ENSG00000183495|Q96L91-4|EP400	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9107543826103	2	685.910019	1369.80549	2.4966	0.0017124	-1.6735	-0.0011479	0.82306	0.00056454	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	0.89803	1	35850	35850		0.45834	0.057624	1	4704100	+		10019	11394	4868	4891	12222	12222					0.13537461213786628
HRKRRKLLL	9	Unmodified	_HRKRRKLLL_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	407.2795593142509	3	407.278919	1218.81493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.73	1	103.79	103.29	104.29	0.059502								0	0	0	0.42693	1	43587	43587		0	0	1				10020	6411	4869	4892	12223	12223					0.21427274289999332
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3567382693291	2	611.357422	1220.70029	2.1411	0.001309	-1.9275	-0.0011784	0.21353	0.00013054	611.3559752604883	77.193	1.4644	77.193	76.284	77.749	0					117	46	3	0	0	0	0.84963	2	32068	32068;32282		0.6015	0	1	2596800			10021	7151	4870	4893	12224;12225	12224					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3572265505791	2	611.357422	1220.70029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.63	1	80.63	80.13	81.13	0								0	0	0	0.42693	1	33574	33574		0.6015	0	1				10022	7151	4870	4893	12226	12226					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3566161990166	2	611.357422	1220.70029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.048	1	81.048	80.548	81.548	0								0	0	0	0.42693	1	33749	33749		0.6015	0	1				10023	7151	4870	4893	12227	12227					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3579589724541	2	611.357422	1220.70029	1.9698	0.0012043	-1.0287	-0.00062888	0.94115	0.00057538	611.3566402316326	77.022	2.1695	77.338	76.479	78.648	0.31653					134	68	3	0	0	0	0.84963	4	32024	32024;32130;32231;32391		0.6015	0	1	3044900			10024	7151	4870	4893	12228;12229;12230;12231	12228					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3569824099541	2	611.357422	1220.70029	1.6593	0.0010144	-1.3109	-0.00080141	0.34846	0.00021304	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.84963	1	33560	33560		0.6015	0	1	10904000			10025	7151	4870	4893	12232	12232					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3574706912041	2	611.357422	1220.70029	2.531	0.0015474	-1.3504	-0.00082556	1.1806	0.00072179	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.75267	2	32713	32713;32883		5.2307	1.2863	1	7141600			10026	7151	4870	4893	12233;12234	12233					0.09876964808040611
HRLRQRGLW	9	Unmodified	_HRLRQRGLW_					0	0	0		ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3564941287041	2	611.357422	1220.70029	1.8236	0.0011148	-1.212	-0.00074094	0.61159	0.0003739	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.82604	1	32674	32674		2.3027	0.4585	1	5176900			10027	7151	4870	4893	12235	12235					0.09876964808040611
HRMKCWQKW	9	Unmodified	_HRMKCWQKW_					0	0	0		ENST00000514030.1_1_5:122153007-122163181:+|nuORF;nc|ENSG00000205302|O60749-2|SNX2;SNX2|p.N438Kfs*15|1|0.12|ENSG00000205302|chr5:122826148-122826185|TAACAAACCAGATAAAATACAGCAAGCTAAAAATGAAA/-|frameshift_variant;ENSG00000205302|ENST00000379516|SNX2	ENST00000514030.1_1_5:122153007-122163181:+|nuORF	ENST00000514030.1_1_5:122153007-122163181:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8827392458916	3	434.883072	1301.62739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4981	1	3.4981	2.9981	3.9981	0								0	0	0	0.42693	1	1436	1436		0.26902	0	1				10028	5176	4871	4894	12236	12236					-0.011362483012590019
HRNEWRPPAGA	11	Unmodified	_HRNEWRPPAGA_					0	0	0		nc|ENSG00000197168|Q6P3R8|NEK5;ENSG00000197168|ENST00000684899|NEK5	nc|ENSG00000197168|Q6P3R8|NEK5	nc|ENSG00000197168|Q6P3R8|NEK5	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877136111259	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.01	1	111.16	110.66	111.66	0.15038								0	0	0	0.63775	1	48120	48120		0.094841	0	1				10029	7961	4872	4895	12237	12237					0.004517739491802786
HRPRNTPF	8	Unmodified	_HRPRNTPF_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;ENST00000470074.1_1_2:160076105-160087520:+|nuORF	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7770873904228	2	512.7754	1023.53625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.702	1	57.67	57.17	58.17	1.9684								0	0	0	1.0178	1	23359	23359		14.582	2.0501	1				10030	1901	4873	4896	12238	12238					0.025419473172632934
HRQLSLPR	8	Unmodified	_HRQLSLPR_					0	0	0		ENST00000536668.2_1_12:10999664-11034822:-|nuORF;ENSG00000111215|ENST00000228811|PRR4	ENST00000536668.2_1_12:10999664-11034822:-|nuORF	ENST00000536668.2_1_12:10999664-11034822:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.2016784548759	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.391	1	33.391	32.891	33.891	0								0	0	0	1.0178	1	13992	13992		1.4819	0	1				10031	1729	4874	4897	12239	12239					0.08062806868429107
HRRIVWKAIP	10	Unmodified	_HRRIVWKAIP_					0	0	0			REV__nc|ENSG00000187605|O43151-2|TET3	REV__nc|ENSG00000187605|O43151-2|TET3	MSMS	GG20161007_CRH_Patient100_W632_01	3	425.9306518435478	3	425.931408	1274.77239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.23189	1	0.89928	0.39928	1.3993	0.66738								0	0	0	0.66254	1	95	95		0.15932	0	1		+		10032	11538	4875	4898	12240	12240					0.1459987916175578
HRRQKNKI	8	Unmodified	_HRRQKNKI_					0	0	0			REV__ENSG00000117133|ENST00000370654|RPF1	REV__ENSG00000117133|ENST00000370654|RPF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3328735232353	2	540.330873	1078.64719	1.695	0.00091584	0.48757	0.00026345	2.1825	0.0011793	540.3311474663974	71.38	1.2424	71.704	71.399	72.641	0.32359					68	38	2	0	0	0	0.89178	1	29804	29804		0.69038	0.088878	1	1742100	+		10033	9493	4876	4899	12241	12241					0.1110158702535955
HRRRRRRTPP	10	Unmodified	_HRRRRRRTPP_					0	0	0			REV__nc|ENSG00000171862|P60484-2|PTEN	REV__nc|ENSG00000171862|P60484-2|PTEN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	463.2850524783134	3	463.283726	1386.82935	1.7431	0.00080757	2.2869	0.0010595	4.0301	0.0018671	463.28535193174287	97.181	0.17945	97.181	97.109	97.289	0					13	5	4	0	0	0	0.89803	1	40635	40635		0.15932	0	1	3691200	+		10034	14489	4877	4900	12242	12242					0.15140739490811939
HRRRRRRTPP	10	Unmodified	_HRRRRRRTPP_					0	0	0			REV__nc|ENSG00000171862|P60484-2|PTEN	REV__nc|ENSG00000171862|P60484-2|PTEN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	463.283726	1386.82935	1.7431	0.00080757	2.2869	0.0010595	4.0301	0.0018671	463.28535193174287	97.181	0.17945	97.181	97.109	97.289	0	-0.026998	0.0016881	NaN	0.15932	13	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3691200	+		10035	14489	4877	4900							0.15140739490811939
HRRRRRRTPP	10	Unmodified	_HRRRRRRTPP_					0	0	0			REV__nc|ENSG00000171862|P60484-2|PTEN	REV__nc|ENSG00000171862|P60484-2|PTEN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	463.283726	1386.82935	3.3884	0.0015698	0.48952	0.00022678	3.878	0.0017966	463.28453355793204	97.145	0.18635	97.235	97.149	97.335	0.090881	0.026998	-0.00081006	NaN	0.15932	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3247100	+		10036	14489	4877	4900							0.15140739490811939
HRRRRRRVCRL	11	Unmodified	_HRRRRRRVCRL_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	522.7919189333916	3	521.986915	1562.93892	2.7857	0.0014541	-0.44641	-0.00023302	2.3393	0.0012211	521.9861938246914	89.182	0.28864	89.406	89.327	89.615	0.22359					10	8	2	0	0	0	0.14606	1	37443	37443		0.094841	0	1	313770	+		10037	11427	4878	4901	12243	12243					0.1799642183850665
HRRRRRRVCRL	11	Unmodified	_HRRRRRRVCRL_					0	0	0			REV__ENSG00000184560|ENST00000333870|SPEM2	REV__ENSG00000184560|ENST00000333870|SPEM2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.3812133669853	3	521.986915	1562.93892	3.2082	0.0016746	-1.3444	-0.00070178	1.8637	0.00097284	521.9852585574233	91.844	0.54728	93.171	93.054	93.601	1.3269					22	16	2	0	0	0	0.14606	1	38634	38634		0	0	1	370220	+		10038	11427	4878	4901	12244	12244					0.1799642183850665
HRRRRVRKRK	10	Unmodified	_HRRRRVRKRK_					0	0	0		KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant;ENSG00000083168|ENST00000265713|KAT6A	KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	483.3194152712822	3	483.318771	1446.93448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.38	1	100.38	99.876	100.88	0								0	0	0	0.66255	1	42018	42018		0.13989	0.056541	1				10039	1037	4879	4902	12245	12245					0.2288928068721816
HRRVNAKT	8	Unmodified	_HRRVNAKT_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2890197634697	2	491.288674	980.562795	3.8234	0.0018784	-2.2365	-0.0010988	1.5869	0.00077962	491.2878540904476	96.996	0.28171	97.281	97.047	97.328	0.28442					18	10	2	0	0	0	0.88663	1	40742	40742		4.756	1.8668	1	3161200	+		10040	8611	4880	4903	12246	12246					0.07173636208608514
HRRVNAKT	8	Unmodified	_HRRVNAKT_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	491.288674	980.562795	3.4164	0.0016784	-2.9967	-0.0014722	0.41974	0.00020622	491.2871777152485	97.134	0.31422	97.225	97.149	97.463	0.090881	-0.064042	-0.0013537	NaN	4.756	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3673700	+		10041	8611	4880	4903							0.07173636208608514
HRRVNAKT	8	Unmodified	_HRRVNAKT_					0	0	0			REV__ENSG00000048405|ENST00000265827|ZNF800	REV__ENSG00000048405|ENST00000265827|ZNF800	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.288674	980.562795	3.8234	0.0018784	-2.2365	-0.0010988	1.5869	0.00077962	491.2878540904476	96.996	0.28171	97.281	97.047	97.328	0.28442	-0.0080363	-0.00060681	NaN	4.756	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3161200	+		10042	8611	4880	4903							0.07173636208608514
HRSISRRHMTL	11	Unmodified	_HRSISRRHMTL_					0	0	0			REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	REV__ZNF462|p.K1242Rfs*39|1|0.04|ENSG00000148143|chr9:106927636-106927636|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.3857299685478	2	697.383311	1392.75207	1.9555	0.0013638	1.0629	0.00074122	3.0184	0.002105	697.3840526396834	54.866	0.71276	55.187	54.962	55.675	0.32088					64	24	4	0	0	0	0.87205	1	22953	22953		11.495	0	1	8341500	+		10043	10336	4881	4904	12247	12247					0.07140340439605097
HRSMLRLCRLR	11	Unmodified	_HRSMLRLCRLR_					0	0	0		nc|ENSG00000161996|Q96KV7-10|WDR90;ENST00000553080.1_1_16:715570-716730:+|nuORF	nc|ENSG00000161996|Q96KV7-10|WDR90	nc|ENSG00000161996|Q96KV7-10|WDR90	MSMS	GG20161007_CRH_Patient100_A02_02	2	480.9421569705009	3	480.943213	1439.80781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.849	1	35.148	34.648	35.648	0.29942								0	0	0	0.63775	1	14638	14638		7.0371	0	1				10044	7278	4882	4905	12248	12248					0.10549850355573653
HRSRRQSQRH	10	Unmodified	_HRSRRQSQRH_					0	0	0			REV__ENSG00000198216|ENST00000367573|CACNA1E	REV__ENSG00000198216|ENST00000367573|CACNA1E	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9118835330009	3	449.911958	1346.71404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.259	1	19.707	19.207	20.207	1.448								0	0	0	0.66151	1	7594	7594		1.9064	0.1641	1		+		10045	11704	4883	4906	12249	12249					0.05455590569181368
HRVVTRVLKK	10	Unmodified	_HRVVTRVLKK_					0	0	0			REV__nc|ENSG00000183495|Q96L91-4|EP400	REV__nc|ENSG00000183495|Q96L91-4|EP400	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.6057922244072	3	412.606813	1234.79861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.055	1	10.055	9.5554	10.555	0								0	0	0	0.66068	1	4144	4144		3.3196	0.82116	1		+		10046	11394	4884	4907	12250	12250					0.19060148333210236
HSDDDYDDP	9	Unmodified	_HSDDDYDDP_					0	0	0		nc|ENSG00000109684|Q7Z7G1-2|CLNK;nc|ENSG00000109684|Q7Z7G1-3|CLNK;ENSG00000109684|ENST00000226951|CLNK	nc|ENSG00000109684|Q7Z7G1-2|CLNK	nc|ENSG00000109684|Q7Z7G1-2|CLNK	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.3291808962822	3	360.124714	1077.35231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0964	1	9.0964	8.5964	9.5964	0								0	0	0	0.42693	1	3744	3744		0	0	1				10047	1672	4885	4908	12251	12251					-0.18326955485417784
HSDWFSDR	8	Unmodified	_HSDWFSDR_					0	0	0			REV__ENST00000548091.5_1_12:93965167-93966593:+|nuORF	REV__ENST00000548091.5_1_12:93965167-93966593:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2287475466728	2	525.225405	1048.43626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.778	1	24.778	24.278	25.278	0								0	0	0	1.0178	1	10337	10337		7.2892	0	1		+		10048	13755	4886	4909	12252	12252					-0.08602334807210354
HSKKTVKKV	9	Unmodified	_HSKKTVKKV_					0	0	0		ZNF740|p.S92Kfs*9|1|0.11|ENSG00000139651|chr12:53185976-53185986|GTTCTTTTCAA/-|frameshift_variant;ENST00000549739.1_1_12:53579221-53580407:+|nuORF;ENSG00000139651|ENST00000416904|ZNF740	ZNF740|p.S92Kfs*9|1|0.11|ENSG00000139651|chr12:53185976-53185986|GTTCTTTTCAA/-|frameshift_variant	ZNF740|p.S92Kfs*9|1|0.11|ENSG00000139651|chr12:53185976-53185986|GTTCTTTTCAA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	352.2296020388603	3	352.229231	1053.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.936	1	60.936	60.436	61.436	0								0	0	0	0.42693	1	25409	25409		0.96228	0.56156	1				10049	2887	4887	4910	12253	12253					0.141177038765818
HSQFRVRHR	9	Unmodified	_HSQFRVRHR_					0	0	0			REV__ENSG00000138381|ENST00000260952|ASNSD1	REV__ENSG00000138381|ENST00000260952|ASNSD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.8395873904228	2	611.836854	1221.65916	2.4849	0.0015204	2.1407	0.0013098	4.6257	0.0028302	611.838315691644	87.023	0.9509	87.267	86.576	87.527	0.24387					261	37	8	0	0	0	0.77526	1	36322	36322		4.3292	0.73274	1	264290000	+		10050	10061	4888	4911	12254	12254					0.057192037685581454
HSRTAVRGK	9	Unmodified	_HSRTAVRGK_					0	0	0			REV__ENST00000261402.6_1_12:106532584-106533082:-|nuORF	REV__ENST00000261402.6_1_12:106532584-106533082:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.4911682009697	3	337.865063	1010.57336	-2.8093	-0.00094917	-2.3136	-0.00078167	-5.1229	-0.0017308	337.86417649968666	13.793	0.18531	13.793	13.702	13.887	0					7	5	2	0	0	0	0.11581	1	5701	5701		4.5289	0.93237	1	153620	+		10051	12185	4889	4912	12255	12255					0.06849618863043361
HSSCTSHA	8	Unmodified	_HSSCTSHA_					0	0	0			REV__nc|ENSG00000254769|Q8NGN8|OR4A4P	REV__nc|ENSG00000254769|Q8NGN8|OR4A4P	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.1666137576103	2	415.166502	828.31845	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.971	1	61.3	60.8	61.8	0.32907								0	0	0	1.0178	1	25546	25546		0.69038	0	1		+		10052	14554	4890	4913	12256	12256					-0.10257610667508743
HSSPESGSTL	10	Unmodified	_HSSPESGSTL_					0	0	0			REV__ENST00000342427.6_1_20:32379363-32379447:+|nuORF	REV__ENST00000342427.6_1_20:32379363-32379447:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2319824099541	2	501.230353	1000.44615	2.6888	0.0013477	0.59363	0.00029755	3.2825	0.0016453	501.23062848551655	82.549	0.46038	84.219	83.954	84.415	1.67					57	14	6	0	0	0	0.81324	1	34633	34633		10.824	0.64053	1	6191300	+		10053	12502	4891	4914	12257	12257					-0.0540519159244468
HSYQLAKVTI	10	Unmodified	_HSYQLAKVTI_					0	0	0		nc|ENSG00000164867|P29474-3|NOS3;nc|ENSG00000164867|P29474-2|NOS3;ENSG00000164867|ENST00000297494|NOS3	nc|ENSG00000164867|P29474-3|NOS3	nc|ENSG00000164867|P29474-3|NOS3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	580.7921020388603	2	580.327131	1158.63971	2.9451	0.0017091	-2.9611	-0.0017184	-0.016	-9.2853E-06	580.3242196022348	74.924	0.40797	76.23	75.996	76.404	1.3063					23	12	3	0	0	0	0.125	1	31378	31378		10.074	1.4806	1	2097900			10054	7912	4892	4915	12258	12258					0.06673389914431027
HTFEATSEIL	10	Unmodified	_HTFEATSEIL_					0	0	0			REV__ENSG00000103489|ENST00000261381|XYLT1	REV__ENSG00000103489|ENST00000261381|XYLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	574.2871581912041	2	574.285128	1146.5557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.329	1	56.298	55.798	56.798	1.9684								0	0	0	0.65836	1	22758	22758		6.7232	0.96273	1		+		10055	9107	4893	4916	12259	12259					-0.01171185973134925
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.2908813357353	2	570.287277	1138.56	4.856	0.0027693	1.8619	0.0010618	6.7179	0.0038311	570.2883319936273	87.566	1.8766	88.658	88.366	90.243	1.0918					165	58	5	0	0	0	0.022807	13	37023	36822;36867;36906;36945;36984;37023;37062;37102;37141;37180;37325;37366;37419		97.075	72.401	1	51016000			10056	2004	4894	4917	12260;12261;12262;12263;12264;12265;12266;12267;12268;12269;12270;12271;12272	12265					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	570.2906371951103	2	570.287277	1138.56	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.891	1	89.947	89.447	90.447	1.0562								0	0	0	0.10193	1	37469	37469		34.102	18.255	1				10057	2004	4894	4917	12273	12273					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	570.2911865115166	2	570.287277	1138.56	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.032	1	90.088	89.588	90.588	1.0562								0	0	0	0.092123	1	37526	37526		36.044	20.197	1				10058	2004	4894	4917	12274	12274					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	570.2906371951103	2	570.287277	1138.56	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.23	1	90.249	89.749	90.749	1.0199								0	0	0	0.18991	1	37606	37606		26.884	12.302	1				10059	2004	4894	4917	12275	12275					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	570.2903320193291	2	570.287277	1138.56	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.418	1	90.438	89.938	90.938	1.0199								0	0	0	0.10193	1	37682	37682		34.102	18.255	1				10060	2004	4894	4917	12276	12276					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.2905761599541	2	570.287277	1138.56	4.6935	0.0026766	1.9849	0.0011319	6.6783	0.0038086	570.2883307805956	87.038	2.431	88.533	88.18	90.611	1.4953					208	76	5	0	0	0	0.0082953	16	36644	36598;36644;36683;36722;36761;36803;36853;36892;36933;37079;37144;37196;37251;37302;37406;37458		109.63	75.527	1	55367000			10061	2004	4894	4917	12277;12278;12279;12280;12281;12282;12283;12284;12285;12286;12287;12288;12289;12290;12291;12292	12278					-0.0037363196888691164
HTFWGVVFF	9	Unmodified	_HTFWGVVFF_					0	0	0		ENST00000461320.5_1_1:150238924-150239633:-|nuORF;nc|ENSG00000117362|Q96BI3-3|APH1A;nc|ENSG00000117362|Q96BI3-2|APH1A;ENSG00000117362|ENST00000369109|APH1A	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	ENST00000461320.5_1_1:150238924-150239633:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.2896606326103	2	570.287277	1138.56	4.6471	0.0026502	-0.89143	-0.00050837	3.7557	0.0021418	570.2865575640114	89.305	0.43492	90.71	90.52	90.955	1.4045					24	13	2	0	0	0	0.37357	1	37603	37603		21.747	7.165	1	525510			10062	2004	4894	4917	12293	12293					-0.0037363196888691164
HTKYSKYKF	9	Unmodified	_HTKYSKYKF_					0	0	0		nc|ENSG00000103546|P23975-3|SLC6A2;SLC6A2|p.F523Lfs*59|1|0.05|ENSG00000103546|chr16:55699632-55699633|-/GCAAGGGAGACTGAGA|frameshift_variant;ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	401.1619140505791	3	401.216991	1200.62914	-0.27504	-0.00011035	-2.9633	-0.0011889	-3.2383	-0.0012993	401.2172005432336	99.972	0.94179	99.972	99.381	100.32	0					43	30	2	0	0	0	0.11944	1	41876	41876		0.96228	0.33545	1	946690			10063	1435	4895	4918	12294	12294					0.036854072599680876
HTLKDLKKR	9	Unmodified	_HTLKDLKKR_					0	0	0			REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	REV__tr|A0A553SUM3|A0A553SUM3_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01355PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2393676638603	3	380.240018	1137.69823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.23	1	108.23	107.73	108.73	0								0	0	0	0.42693	1	46591	46591		0.26902	0	1		+		10064	15296	4896	4919	12295	12295					0.13488491279554182
HTMQKVEL	8	Unmodified	_HTMQKVEL_					0	0	0		ENST00000361951.4_1_1:173826846-173826999:+|nuORF	ENST00000361951.4_1_1:173826846-173826999:+|nuORF	ENST00000361951.4_1_1:173826846-173826999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2597534060478	2	493.260402	984.506251	2.0432	0.0010078	2.2448	0.0011073	4.288	0.0021151	493.25934570472845	41.965	0.3355	43.305	43.141	43.476	1.3399					15	10	2	0	0	0	0.66196	1	17620	17620		34.102	3.4659	1	2423200			10065	6045	4897	4920	12296	12296					0.013378275370769188
HTVGFILQL	9	Unmodified	_HTVGFILQL_					0	0	0		ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188;ENSG00000095319|ENST00000372577|NUP188	ENST00000477069.5_1_9:131747266-131765892:+|nuORF	ENST00000477069.5_1_9:131747266-131765892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3019897341728	2	514.300384	1026.58622	2.4247	0.001247	1.3385	0.00068841	3.7633	0.0019354	514.3010203765278	68.186	0.86237	69.564	69.271	70.134	1.3778					56	27	3	0	0	0	0.031377	4	28590	28545;28590;28645;28700		85.272	34.972	1	8357400			10066	1184	4898	4921	12297;12298;12299;12300	12298					0.073986372025729
HTVGFILQL	9	Unmodified	_HTVGFILQL_					0	0	0		ENST00000477069.5_1_9:131747266-131765892:+|nuORF;nc|ENSG00000095319|Q5SRE5-2|NUP188;ENSG00000095319|ENST00000372577|NUP188	ENST00000477069.5_1_9:131747266-131765892:+|nuORF	ENST00000477069.5_1_9:131747266-131765892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3015014529228	2	514.300384	1026.58622	2.0102	0.0010339	0.83733	0.00043064	2.8475	0.0014645	514.3007698984981	67.604	0.65048	69.474	69.176	69.827	1.87					59	20	4	0	0	0	0.0066739	4	28339	28290;28339;28382;28435		115.69	55.302	1	6845400			10067	1184	4898	4921	12301;12302;12303;12304	12302					0.073986372025729
HVAGKPRA	8	Unmodified	_HVAGKPRA_					0	0	0		ENSG00000157895|ENST00000288757|C12orf43;ENST00000508193.2_1_12:121444088-121454277:-|nuORF	ENSG00000157895|ENST00000288757|C12orf43	ENSG00000157895|ENST00000288757|C12orf43	MSMS	GG20161007_CRH_Patient100_W632_02	4	418.2472411990166	2	418.248486	834.48242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.953	1	38.771	38.271	39.271	1.8176								0	0	0	1.0178	1	15506	15506		0.79363	0	1				10068	3485	4899	4922	12305	12305					0.05855774885549181
HVCCEWWC	8	Unmodified	_HVCCEWWC_					0	0	0			REV__ENST00000509294.1_1_5:470082-471349:+|nuORF	REV__ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913940310478	2	533.190608	1064.36666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.075	1	34.075	33.575	34.575	0								0	0	0	1.0178	1	14280	14280		0.79363	0	1		+		10069	13560	4900	4923	12306	12306					-0.1629457634346636
HVEIDPEIQKV	11	Unmodified	_HVEIDPEIQKV_					0	0	0		ENSG00000170477|ENST00000551956|KRT4;CON__P19013;KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	ENSG00000170477|ENST00000551956|KRT4	ENSG00000170477|ENST00000551956|KRT4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	436.2396728396416	3	436.238232	1305.69287	0.90967	0.00039683	1.5233	0.00066452	2.433	0.0010614	436.2392108206057	33.355	0.28035	33.355	33.204	33.484	0					20	8	3	0	0	0	0.80586	1	13976	13976		8.7518	2.1283	1	1807300		+	10070	349	4901	4924	12307	12307					0.05224722906405077
HVHKRGRI	8	Unmodified	_HVHKRGRI_					0	0	0			REV__ENST00000298355.7_1_14:51562604-51562745:-|nuORF	REV__ENST00000298355.7_1_14:51562604-51562745:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8075439333916	2	501.807034	1001.59952	2.2765	0.0011424	-0.44541	-0.00022351	1.8311	0.00091886	501.80662193423024	78.338	1.092	78.648	78.227	79.319	0.30933					73	34	3	0	0	0	0.89178	1	32910	32910		0.69038	0	1	2355400	+		10071	12304	4902	4925	12308	12308					0.09877932825190783
HVHLHVLGGR	10	Unmodified	_HVHLHVLGGR_					0	0	0		ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	375.5524169802666	3	375.552708	1123.63629	-1.4938	-0.000561	0.24481	9.1939E-05	-1.249	-0.00046906	375.5527157428007	17.997	0.40998	17.997	17.902	18.312	0					26	15	2	0	0	0	0.091617	1	7472	7472		65.474	48.361	1	1810800			10072	4097	4903	4926	12309	12309					0.07942184651074058
HVHREPGR	8	Unmodified	_HVHREPGR_					0	0	0			REV__ENST00000447116.6_1_3:40524151-40528303:+|nuORF	REV__ENST00000447116.6_1_3:40524151-40528303:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2664977908134	2	494.265199	986.515845	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.067	1	79.067	78.567	79.567	0								0	0	0	1.0178	1	32918	32918		2.3027	0.24298	1		+		10073	13109	4904	4927	12310	12310					0.0220477665747012
HVHYRIFPIK	10	Unmodified	_HVHYRIFPIK_					0	0	0		ENSG00000123684|ENST00000366997|LPGAT1	ENSG00000123684|ENST00000366997|LPGAT1	ENSG00000123684|ENST00000366997|LPGAT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	655.3840820193291	2	655.380032	1308.74551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.856	1	82.856	82.356	83.356	0								0	0	0	0.66151	1	34520	34520		3.9444	2.1002	1				10074	2198	4905	4928	12311	12311					0.10348770550558584
HVIHKYFLPR	10	Unmodified	_HVIHKYFLPR_					0	0	0		ENST00000495270.1_1_9:130698003-130699012:-|nuORF;ENSG00000136908|ENST00000314392|DPM2	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	655.3831054568291	2	655.380032	1308.74551	2.2567	0.001479	3.6408	0.0023861	5.8975	0.0038651	655.3824661832766	81.241	1.4681	81.241	80.447	81.915	0					103	47	3	0	0	0	0.89588	1	33810	33810		1.6526	0	1	3846400			10075	2748	4906	4929	12312	12312					0.10348770550535846
HVIHKYFLPR	10	Unmodified	_HVIHKYFLPR_					0	0	0		ENST00000495270.1_1_9:130698003-130699012:-|nuORF;ENSG00000136908|ENST00000314392|DPM2	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	655.3842651247978	2	655.380032	1308.74551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.072	1	83.284	82.784	83.784	1.2125								0	0	0	0.66218	1	34455	34455		0.45834	0.057624	1				10076	2748	4906	4929	12313	12313					0.10348770550535846
HVIHKYFLPR	10	Unmodified	_HVIHKYFLPR_					0	0	0		ENST00000495270.1_1_9:130698003-130699012:-|nuORF;ENSG00000136908|ENST00000314392|DPM2	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	ENST00000495270.1_1_9:130698003-130699012:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	655.3852416872978	2	655.380032	1308.74551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.195	1	83.407	82.907	83.907	1.2125								0	0	0	0.66218	1	34506	34506		0.45834	0.10771	1				10077	2748	4906	4929	12314	12314					0.10348770550535846
HVKSMDAFEE	10	Unmodified	_HVKSMDAFEE_					0	0	0			REV__ENST00000555950.5_1_14:33086197-33201884:+|nuORF	REV__ENST00000555950.5_1_14:33086197-33201884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7653076052666	2	596.768788	1191.52302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.931	1	52.906	52.406	53.406	1.9753								0	0	0	0.59233	1	21342	21342		21.537	0	1		+		10078	8096	4907	4930	12315	12315					-0.06507716367627836
HVLDSGLAY	9	Unmodified	_HVLDSGLAY_					0	0	0		ENSG00000104866|ENST00000221462|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7510558962822	2	487.750724	973.486896	1.5493	0.00075568	-1.0958	-0.00053449	0.45349	0.00022119	487.7500704694108	38.252	0.3272	38.252	38.047	38.375	0					29	12	3	0	0	0	0.033521	1	16039	16039		81.864	0.25097	1	6543100			10079	1484	4908	4931	12316	12316					-0.0009080548219344564
HVLFGGHLE	9	Unmodified	_HVLFGGHLE_					0	0	0			REV__tr|A0A553SPP9|A0A553SPP9_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_26815PE=4SV=1	REV__tr|A0A553SPP9|A0A553SPP9_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_26815PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	505.5470458865166	2	504.766709	1007.51886	0.39938	0.0002016	1.002	0.00050576	1.4014	0.00070736	504.7666693370995	15.297	0.18545	16.123	16.014	16.2	0.82643					9	5	2	0	0	0	0.11463	1	6374	6374		12.532	0	1	459530	+		10080	15098	4909	4932	12317	12317					0.015406069916252818
HVLFLGTDR	9	Unmodified	_HVLFLGTDR_					0	0	0		ENSG00000075223|ENST00000265361|SEMA3C	ENSG00000075223|ENST00000265361|SEMA3C	ENSG00000075223|ENST00000265361|SEMA3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.2960082888603	2	529.293091	1056.57163	2.626	0.0013899	0.24706	0.00013077	2.8731	0.0015207	529.293396464459	87.886	0.41676	87.886	87.671	88.088	0					36	13	4	0	0	0	0.7849	1	36684	36684		3.9444	1.3669	1	2574800			10081	926	4910	4933	12318	12318					0.04560565054430299
HVLHKECI	8	Carbamidomethyl (C)	_HVLHKEC(Carbamidomethyl (C))I_	HVLHKEC(1)I		HVLHKEC(46)I		0	1	0		ENST00000534709.1_1_11:117152603-117155864:+|nuORF;nc|ENSG00000167257|Q8ND24-2|RNF214;ENSG00000167257|ENST00000300650|RNF214	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	ENST00000534709.1_1_11:117152603-117155864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.8506042361259	3	345.851655	1034.53313	-2.4759	-0.0008563	-0.2496	-8.6325E-05	-2.7255	-0.00094263	345.85157951877216	14.748	0.90115	14.748	14.503	15.405	0					85	28	4	0	0	0	0.52405	1	6145	6145		46.021	15.384	1	4894200			10082	3959	4911	4934	12319	12319	6				0.017249361482527092
HVLRNNFLLL	10	Unmodified	_HVLRNNFLLL_					0	0	0			REV__ENSG00000176020|ENST00000320431|AMIGO3	REV__ENSG00000176020|ENST00000320431|AMIGO3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8714477419853	2	619.87204	1237.72953	2.0999	0.0013017	-3.6377	-0.0022549	-1.5378	-0.00095326	619.8695638019524	78.079	0.87718	78.079	77.658	78.535	0					59	27	3	0	0	0	0.89803	1	32607	32607		1.6526	0.58116	1	1331100	+		10083	11168	4912	4935	12320	12320					0.1201706431365892
HVLVHCKMGVS	11	Oxidation (M)	_HVLVHCKM(Oxidation (M))GVS_		HVLVHCKM(1)GVS		HVLVHCKM(56)GVS	0	0	1		nc|ENSG00000172830|Q8TE77-2|SSH3;ENSG00000172830|ENST00000308127|SSH3;nc|ENSG00000172830|Q8TE77-5|SSH3;nc|ENSG00000172830|Q8TE77-3|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.3124267458916	2	613.312643	1224.61073	0.97779	0.00059969	-1.1926	-0.00073141	-0.21476	-0.00013172	613.3119368881236	16.072	0.43823	16.072	15.902	16.34	0					37	13	5	0	0	0	0.10188	1	6703	6703		55.503	7.9084	1	13939000			10084	4255	4913	4936	12321	12321		73			0.0074120602212133235
HVNWVVSEL	9	Unmodified	_HVNWVVSEL_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;DYNC1H1|p.P2596Tfs*19|1|0.06|ENSG00000197102|chr14:102016936-102016937|-/A|frameshift_variant;DYNC1H1|p.V1545Afs*34|1|0.16|ENSG00000197102|chr14:102002628-102002628|T/-|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7859985232353	2	541.785099	1081.55564	1.0023	0.00054301	1.0061	0.00054509	2.0084	0.0010881	541.7854855103823	52.505	0.63004	53.902	53.712	54.342	1.3966					36	19	3	0	0	0	0.023786	3	21993	21945;21993;22042		96.285	44.016	1	5247400			10085	433	4914	4937	12322;12323;12324	12323					0.01812858817538654
HVNWVVSEL	9	Unmodified	_HVNWVVSEL_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;DYNC1H1|p.P2596Tfs*19|1|0.06|ENSG00000197102|chr14:102016936-102016937|-/A|frameshift_variant;DYNC1H1|p.V1545Afs*34|1|0.16|ENSG00000197102|chr14:102002628-102002628|T/-|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7862426638603	2	541.785099	1081.55564	1.2815	0.00069429	0.79968	0.00043325	2.0812	0.0011275	541.7853784960241	51.898	0.4329	53.87	53.676	54.109	1.9722					36	13	4	0	0	0	0.023786	3	21765	21719;21765;21811		96.285	44.016	1	5983400			10086	433	4914	4937	12325;12326;12327	12326					0.01812858817538654
HVQETPPTK	9	Unmodified	_HVQETPPTK_					0	0	0			REV__ENST00000306688.7_1_17:79981719-79983267:+|nuORF	REV__ENST00000306688.7_1_17:79981719-79983267:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.8508178591728	3	346.185579	1035.53491	-0.14756	-5.1082E-05	-1.3782	-0.00047713	-1.5258	-0.00052821	346.18510543246407	14.058	1.2162	14.171	13.667	14.883	0.11295					50	38	2	0	0	0	0.11581	1	5817	5817		11.495	3.5846	1	814540	+		10087	12340	4915	4938	12328	12328					0.018562684378366612
HVQHRVAPRPI	11	Unmodified	_HVQHRVAPRPI_					0	0	0			REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	655.3842040896416	2	655.383637	1308.75272	2.2644	0.001484	-1.364	-0.00089397	0.90032	0.00059005	655.3824177491845	83.357	2.4268	83.627	82.756	85.183	0.27029					216	77	5	0	0	0	1.0388	1	34854	34854		0.35063	0	1	5228000	+		10088	14545	4916	4939	12329	12329					0.11069503150974924
HVQHRVAPRPI	11	Unmodified	_HVQHRVAPRPI_					0	0	0			REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.3853027224541	2	655.383637	1308.75272	3.0352	0.0019892	-0.97297	-0.00063767	2.0622	0.0013516	655.3830394817613	82.534	1.8158	83.747	82.945	84.761	1.2125					118	57	3	0	0	0	1.0388	1	34647	34647		0.35063	0	1	7127800	+		10089	14545	4916	4939	12330	12330					0.11069503150974924
HVQHRVAPRPI	11	Unmodified	_HVQHRVAPRPI_					0	0	0			REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	REV__nc|ENSG00000233295|A6NIJ5|FAM90A20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3846923708916	2	655.383637	1308.75272	3.2726	0.0021448	-0.92256	-0.00060463	2.35	0.0015402	655.3825315034384	82.484	1.4639	84.154	83.11	84.574	1.67					100	46	4	0	0	0	1.0388	1	34389	34389		0.35063	0	1	4909200	+		10090	14545	4916	4939	12331	12331					0.11069503150974924
HVQLLKRNA	9	Unmodified	_HVQLLKRNA_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2225524783134	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.214	1	19.407	18.907	19.907	0.19342								0	0	0	0.42693	1	7979	7979		1.1933	0.41681	1		+		10091	12020	4917	4940	12332	12332					0.10499649073994988
HVQLLKRNA	9	Unmodified	_HVQLLKRNA_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2225219607353	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.416	1	19.61	19.11	20.11	0.19342								0	0	0	0.42693	1	8065	8065		1.1933	0.41681	1		+		10092	12020	4917	4940	12333	12333					0.10499649073994988
HVQLLKRNA	9	Unmodified	_HVQLLKRNA_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2225524783134	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.674	1	19.868	19.368	20.368	0.19342								0	0	0	0.42693	1	8174	8174		2.7352	1.5419	1		+		10093	12020	4917	4940	12334	12334					0.10499649073994988
HVQSRPRTRT	10	Unmodified	_HVQSRPRTRT_					0	0	0			REV__ENST00000592094.1_1_17:41454936-41458731:-|nuORF	REV__ENST00000592094.1_1_17:41454936-41458731:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	619.3494750857353	2	619.347252	1236.67995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.337	1	61.337	60.837	61.837	0								0	0	0	0.66166	1	25575	25575		1.6526	0	1		+		10094	14075	4918	4941	12335	12335					0.07107749357533066
HVRCERRD	8	Unmodified	_HVRCERRD_					0	0	0		nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.2071105837822	3	357.513925	1069.51994	-0.095755	-3.4234E-05	0.14784	5.2853E-05	0.052081	1.862E-05	357.51400575218315	22.41	0.22336	23.587	23.444	23.667	1.177					10	6	2	0	0	0	2.3239	1	9317	9317		0	0	1	445290			10095	4772	4919	4942	12336	12336					-0.0120350191111811
HVRCERRD	8	Unmodified	_HVRCERRD_					0	0	0		nc|ENSG00000185920|Q13635-4|PTCH1;nc|ENSG00000185920|Q13635-3|PTCH1;nc|ENSG00000185920|Q13635-2|PTCH1;ENSG00000185920|ENST00000331920|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	nc|ENSG00000185920|Q13635-4|PTCH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	358.2068664431572	3	357.513925	1069.51994	0.091473	3.2703E-05	-0.75806	-0.00027102	-0.66659	-0.00023831	357.51364914734046	22.029	0.25194	23.645	23.486	23.738	1.6158					12	7	2	0	0	0	2.3239	1	9212	9212		1.8442	0	1	350670			10096	4772	4919	4942	12337	12337					-0.0120350191111811
HVRLITKESR	10	Unmodified	_HVRLITKESR_					0	0	0		nc|ENSG00000121988|Q5FWF4-4|ZRANB3;nc|ENSG00000121988|Q5FWF4-2|ZRANB3;ENST00000403017.2_1_2:135957914-136028945:-|nuORF;nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8701049685478	2	619.870028	1237.7255	2.1605	0.0013392	-1.3978	-0.00086644	0.76272	0.00047278	619.8688226108452	75.929	0.74268	75.929	75.723	76.466	0					48	23	3	0	0	0	0.89803	1	31645	31645		1.4819	1.1749	1	1040800			10097	2147	4920	4943	12338	12338					0.11614974819917734
HVRLITKESR	10	Unmodified	_HVRLITKESR_					0	0	0		nc|ENSG00000121988|Q5FWF4-4|ZRANB3;nc|ENSG00000121988|Q5FWF4-2|ZRANB3;ENST00000403017.2_1_2:135957914-136028945:-|nuORF;nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8698608279228	2	619.870028	1237.7255	2.0999	0.0013017	-0.3929	-0.00024355	1.707	0.0010581	619.8695638019524	78.079	0.87718	78.079	77.658	78.535	0					59	27	3	0	0	0	0.89803	1	32502	32502		1.4819	0.8804	1	1331100			10098	2147	4920	4943	12339	12339					0.11614974819917734
HVRLITKESR	10	Unmodified	_HVRLITKESR_					0	0	0		nc|ENSG00000121988|Q5FWF4-4|ZRANB3;nc|ENSG00000121988|Q5FWF4-2|ZRANB3;ENST00000403017.2_1_2:135957914-136028945:-|nuORF;nc|ENSG00000121988|Q5FWF4-3|ZRANB3;ENSG00000121988|ENST00000264159|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	nc|ENSG00000121988|Q5FWF4-4|ZRANB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8705322146416	2	619.870028	1237.7255	2.2512	0.0013954	-0.84956	-0.00052662	1.4016	0.00086883	619.8691419303617	80.651	1.1962	80.651	80.447	81.643	0					58	38	2	0	0	0	0.89803	1	33751	33751		1.4819	1.0236	1	2186700			10099	2147	4920	4943	12340	12340					0.11614974819917734
HVRQHIYL	8	Unmodified	_HVRQHIYL_					0	0	0			REV__ZNF226|p.H469Tfs*18|1|0.05|ENSG00000167380|chr19:44176665-44176665|T/-|frameshift_variant	REV__ZNF226|p.H469Tfs*18|1|0.05|ENSG00000167380|chr19:44176665-44176665|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1915771365166	2	533.30125	1064.58795	1.94	0.0010346	-1.3428	-0.00071612	0.59717	0.00031847	533.3004187919644	46.738	0.26646	46.738	46.596	46.863	0					18	8	3	0	0	0	2.3239	1	19546	19546		2.8892	0	1	808540	+		10100	10863	4921	4944	12341	12341					0.05823691011164556
HVRQHIYL	8	Unmodified	_HVRQHIYL_					0	0	0			REV__ZNF226|p.H469Tfs*18|1|0.05|ENSG00000167380|chr19:44176665-44176665|T/-|frameshift_variant	REV__ZNF226|p.H469Tfs*18|1|0.05|ENSG00000167380|chr19:44176665-44176665|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1924316287041	2	533.30125	1064.58795	1.8537	0.00098859	-1.2525	-0.00066796	0.60122	0.00032063	533.30019469814	46.216	0.28999	46.545	46.391	46.681	0.32899					15	9	2	0	0	0	2.3239	1	19388	19388		0.79363	0	1	1054300	+		10101	10863	4921	4944	12342	12342					0.05823691011164556
HVRRHKTL	8	Unmodified	_HVRRHKTL_					0	0	0			REV__ENST00000596248.1_1_19:58319410-58325921:-|nuORF	REV__ENST00000596248.1_1_19:58319410-58325921:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.8221923708916	2	523.820141	1045.62573	2.1548	0.0011287	0.57312	0.00030021	2.7279	0.001429	523.8202258152819	80.938	1.0776	81.229	80.655	81.732	0.29056					78	34	3	0	0	0	0.88958	1	33894	33894		2.8892	0	1	2133500	+		10102	11262	4922	4945	12343	12343					0.10474201996657939
HVRTLQSIVEK	11	Unmodified	_HVRTLQSIVEK_					0	0	0			REV__ENSG00000242950|ENST00000603053|ERVW-1	REV__ENSG00000242950|ENST00000603053|ERVW-1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	655.3842651247978	2	655.382968	1308.75138	2.2644	0.001484	-0.34372	-0.00022527	1.9206	0.0012588	655.3824177491845	83.357	2.4268	83.627	82.756	85.183	0.27029					216	77	5	0	0	0	1.0156	3	35067	35067;35325;35394		6.2058	4.5532	1	5228000	+		10103	11930	4923	4946	12344;12345;12346	12344					0.10935824271541605
HVSDTSVVL	9	Unmodified	_HVSDTSVVL_					0	0	0		ENSG00000170477|ENST00000551956|KRT4;CON__P19013;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__P07744	ENSG00000170477|ENST00000551956|KRT4;CON__Q922U2	CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7564880251884	2	478.756007	955.497461	1.4243	0.0006819	-0.4394	-0.00021036	0.98492	0.00047153	478.7558639093075	25.407	0.39558	26.667	26.468	26.863	1.2594					27	12	3	0	0	0	0.046276	2	10622	10622;10668		70.716	34.589	1	4212100		+	10104	363;349	4924	4947	12347;12348	12347					0.01793177172248761
HVSDTSVVL	9	Unmodified	_HVSDTSVVL_					0	0	0		ENSG00000170477|ENST00000551956|KRT4;CON__P19013;ENST00000547890.5_1_12:52910884-52911722:-|nuORF;CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__P07744	ENSG00000170477|ENST00000551956|KRT4;CON__Q922U2	CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7563964724541	2	478.756007	955.497461	0.61583	0.00029483	0.12416	5.9444E-05	0.73999	0.00035428	478.75614652165086	25.057	0.33279	26.774	26.574	26.907	1.7167					24	10	3	0	0	0	0.069258	2	10479	10431;10479		60.39	31.308	1	4056500		+	10105	363;349	4924	4947	12349;12350	12350					0.01793177172248761
HVSLVQLTL	9	Unmodified	_HVSLVQLTL_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3057739138603	2	505.305667	1008.59678	0.71412	0.00036085	0.10833	5.474E-05	0.82244	0.00041559	505.3054359714734	57.794	0.26545	59.212	59.087	59.353	1.4181					31	18	2	0	0	0	0.00020592	2	24206	24206;24250		141.83	45.542	1	12463000			10106	2543	4925	4948	12351;12352	12351					0.09282619856992369
HVSLVQLTL	9	Unmodified	_HVSLVQLTL_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3064147830009	2	505.305667	1008.59678	0.50105	0.00025318	0.29048	0.00014678	0.79153	0.00039997	505.30606955772635	57.208	0.26684	59.176	59.077	59.344	1.9684					31	19	2	0	0	0	4.1345E-05	3	23974	23974;24012;24060		156.16	35.705	1	11280000			10107	2543	4925	4948	12353;12354;12355	12353					0.09282619856992369
HVSPLIGR	8	Unmodified	_HVSPLIGR_					0	0	0		ENST00000515736.2_1_5:174938457-174940595:+|nuORF;ENST00000507823.5_1_5:174919260-174949462:+|nuORF;ENSG00000164466|ENST00000321442|SFXN1	ENST00000515736.2_1_5:174938457-174940595:+|nuORF	ENST00000515736.2_1_5:174938457-174940595:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.7641784548759	2	439.763969	877.513385	0.31539	0.0001387	0.069771	3.0683E-05	0.38516	0.00016938	439.76407285179727	14.982	0.12504	15.878	15.805	15.93	0.89664					5	3	2	0	0	0	0.87572	1	6229	6229		11.64	0	1	232550			10108	3779	4926	4949	12356	12356					0.06972928199820672
HVTMVVAEL	9	Unmodified	_HVTMVVAEL_					0	0	0		ENST00000503693.1_1_4:1283701-1322488:+|nuORF;nc|ENSG00000090316|Q7L5Y9-5|MAEA;MAEA|p.Q268Hfs*54|1|0.21|ENSG00000090316|chr4:1336899-1336899|G/-|frameshift_variant;nc|ENSG00000090316|Q7L5Y9-4|MAEA;nc|ENSG00000090316|Q7L5Y9-3|MAEA;nc|ENSG00000090316|Q7L5Y9-2|MAEA;ENSG00000090316|ENST00000303400|MAEA	ENST00000503693.1_1_4:1283701-1322488:+|nuORF	ENST00000503693.1_1_4:1283701-1322488:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2705566287041	2	499.770603	997.526652	1.9781	0.00098862	-0.0296	-1.4793E-05	1.9485	0.00097383	500.27195073484745	43.839	0.22338	45.782	45.639	45.862	1.9438					9	6	2	0	0	0	0.37357	1	18367	18367		21.747	13.836	1	493680			10109	1136	4927	4950	12357	12357					0.027789981968680877
HVTSYIYTNK	10	Unmodified	_HVTSYIYTNK_					0	0	0		tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2108032107353	3	409.211906	1224.61389	-0.62103	-0.00025413	-1.8009	-0.00073696	-2.422	-0.0009911	409.2112370923027	16.083	0.3431	16.083	15.902	16.245	0					27	10	4	0	0	0	0.846	1	6719	6719		3.8763	0.28366	1	5829200			10110	17192	4928	4951	12358	12358					0.010564956721282215
HVTSYIYTNK	10	Unmodified	_HVTSYIYTNK_					0	0	0		tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.3140136599541	2	613.31422	1224.61389	0.26382	0.0001618	-2.6918	-0.0016509	-2.428	-0.0014891	613.312621931397	15.999	0.27702	16.129	15.963	16.24	0.13022					27	8	4	0	0	0	0.74985	1	6599	6599		16.149	1.7437	1	5468000			10111	17192	4928	4951	12359	12359					0.010564956721282215
HVTSYIYTNK	10	Unmodified	_HVTSYIYTNK_					0	0	0		tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.2101928591728	3	409.211906	1224.61389	0.54114	0.00022144	-2.8027	-0.0011469	-2.2616	-0.00092547	409.2108604457665	15.972	0.27702	16.102	15.963	16.24	0.13022					22	8	3	0	0	0	0.846	1	6663	6663		3.8763	0	1	3131600			10112	17192	4928	4951	12360	12360					0.010564956721282215
HVTSYIYTNK	10	Unmodified	_HVTSYIYTNK_					0	0	0		tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3151733279228	2	613.31422	1224.61389	0.046764	2.8681E-05	-2.5056	-0.0015367	-2.4588	-0.001508	613.3126940453661	15.389	0.24733	16.216	16.076	16.324	0.82643					20	7	4	0	0	0	0.79268	1	6429	6429		13.042	2.243	1	3532400			10113	17192	4928	4951	12361	12361					0.010564956721282215
HVTSYIYTNK	10	Unmodified	_HVTSYIYTNK_					0	0	0		tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	tr|A0A7D6ZXN5|A0A7D6ZXN5_9CLOTGlycosyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3120605349541	2	613.31422	1224.61389	0.15207	9.3267E-05	-2.7547	-0.0016895	-2.6027	-0.0015963	613.3124656228277	15.309	0.23396	16.206	16.082	16.315	0.89664					18	7	3	0	0	0	0.79268	1	6388	6388		13.042	2.243	1	2592300			10114	17192	4928	4951	12362	12362					0.010564956721282215
HVYTFRSV	8	Unmodified	_HVYTFRSV_					0	0	0		ENSG00000128253|ENST00000652607|RFPL2;nc|ENSG00000128276|O75679-2|RFPL3;nc|ENSG00000128253|O75678-3|RFPL2;ENSG00000128276|ENST00000249007|RFPL3;ENSG00000128250|ENST00000354373|RFPL1	ENSG00000128253|ENST00000652607|RFPL2	ENSG00000128253|ENST00000652607|RFPL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	505.5471374392509	2	504.766709	1007.51886	0.11532	5.8209E-05	2.0212	0.0010202	2.1365	0.0010785	504.7670899159707	15.198	0.26152	16.094	15.96	16.222	0.89664					12	8	2	0	0	0	2.3239	1	6280	6280		2.3027	0.24298	1	325020			10115	2360	4929	4952	12363	12363					0.015406069916252818
HWCWSCHFR	9	Unmodified	_HWCWSCHFR_					0	0	0			REV__ENSG00000198471|ENST00000358241|RTP2	REV__ENSG00000198471|ENST00000358241|RTP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	631.5752441287041	2	631.260745	1260.50694	0.82672	0.00052188	0.55133	0.00034803	1.378	0.00086991	631.2610257334967	13.294	0.40202	13.294	13.115	13.517	0					31	12	4	0	0	0	0.11812	1	5445	5445		4.756	0.42677	1	2888800	+		10116	11141	4930	4953	12364	12364					-0.11289656294889028
HWETQWEK	8	Unmodified	_HWETQWEK_					0	0	0			REV__ENST00000562955.2_2_1:43918838-43918946:+|nuORF	REV__ENST00000562955.2_2_1:43918838-43918946:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5115539431572	3	381.845446	1142.51451	-0.21093	-8.0544E-05	-2.5758	-0.00098356	-2.7867	-0.0010641	381.84447516932084	5.2458	0.19818	5.9822	5.9199	6.118	0.73642					19	13	2	0	0	0	2.3239	1	2203	2203		7.2892	3.6927	1	277430	+		10117	13910	4931	4954	12365	12365					-0.05104902221955854
HWHDYQYR	8	Unmodified	_HWHDYQYR_					0	0	0		ENSG00000122335|ENST00000647468|SERAC1;ENST00000607742.5_1_6:158538757-158579378:-|nuORF;nc|ENSG00000122335|Q96JX3-2|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	ENSG00000122335|ENST00000647468|SERAC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1800720095634	3	402.18094	1203.52099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2233	1	8.2233	7.7233	8.7233	0								0	0	0	1.0178	1	3382	3382		0.45834	0.18932	1				10118	2152	4932	4955	12366	12366					-0.07262964270580596
HWHWYSRE	8	Unmodified	_HWHWYSRE_					0	0	0		tr|A0A553SRJ0|A0A553SRJ0_NIACIMetal-bindingproteinZinTOS=NialliacirculansOX=1397GN=CEQ21_01180PE=4SV=1	tr|A0A553SRJ0|A0A553SRJ0_NIACIMetal-bindingproteinZinTOS=NialliacirculansOX=1397GN=CEQ21_01180PE=4SV=1	tr|A0A553SRJ0|A0A553SRJ0_NIACIMetal-bindingproteinZinTOS=NialliacirculansOX=1397GN=CEQ21_01180PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0822631716728	3	400.849302	1199.52608	-0.27142	-0.0001088	0.74457	0.00029846	0.47315	0.00018966	400.84962689642526	29.317	0.18297	29.317	29.149	29.332	0					7	5	2	0	0	0	2.3239	1	12206	12206		0.45834	0	1	305870			10119	16561	4933	4956	12367	12367					-0.06570660407965079
HWIQLSTPTT	10	Unmodified	_HWIQLSTPTT_					0	0	0		ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3119384646416	2	592.308938	1182.60332	1.7322	0.001026	2.9093	0.0017232	4.6415	0.0027492	592.3122552226523	46.413	0.59121	47.788	47.365	47.956	1.3751					36	18	3	0	0	0	0.74985	3	19462	19360;19411;19462		16.149	3.6593	1	2314400			10120	5744	4934	4957	12368;12369;12370	12370					0.019325130176866878
HWIQLSTPTT	10	Unmodified	_HWIQLSTPTT_					0	0	0		ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3115112185478	2	592.308938	1182.60332	2.1919	0.0012983	3.2283	0.0019121	5.4202	0.0032105	592.3119070528281	47.076	0.7347	48.459	48.09	48.825	1.3825					32	22	2	0	0	0	0.74985	2	19695	19643;19695		16.149	3.6593	1	1174400			10121	5744	4934	4957	12371;12372	12372					0.019325130176866878
HWIQLSTPTT	10	Unmodified	_HWIQLSTPTT_					0	0	0		ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3116332888603	2	592.308938	1182.60332	1.315	0.0007789	2.3536	0.0013941	3.6687	0.002173	592.3120804705736	45.936	0.46454	47.906	47.599	48.064	1.9703					34	14	3	0	0	0	0.74985	1	19234	19234		16.149	3.6176	1	2208300			10122	5744	4934	4957	12373	12373					0.019325130176866878
HWIQLSTPTT	10	Unmodified	_HWIQLSTPTT_					0	0	0		ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	ENST00000298818.12_1_14:74961032-74961700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3102905154228	2	592.308938	1182.60332	1.8117	0.0010731	2.1765	0.0012892	3.9883	0.0023623	592.3111394470056	46.675	0.67644	48.645	48.188	48.864	1.9703					38	21	2	0	0	0	0.74985	4	19415	19415;19465;19543;19608		16.149	3.6176	1	866650			10123	5744	4934	4957	12374;12375;12376;12377	12374					0.019325130176866878
HWLLWGLLL	9	Unmodified	_HWLLWGLLL_					0	0	0		ENST00000370949.1_1_1:70700379-70700463:+|nuORF	ENST00000370949.1_1_1:70700379-70700463:+|nuORF	ENST00000370949.1_1_1:70700379-70700463:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8430053591728	2	575.84222	1149.66989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.365	1	71.365	70.865	71.865	0								0	0	0	0.42693	1	29721	29721		0.6015	0	1				10124	6123	4935	4958	12378	12378					0.10103793370262792
HWLPKPRCF	9	Unmodified	_HWLPKPRCF_					0	0	0		ENST00000590899.5_1_19:16222711-16232755:+|nuORF	ENST00000590899.5_1_19:16222711-16232755:+|nuORF	ENST00000590899.5_1_19:16222711-16232755:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3163329958916	2	592.313303	1182.61205	2.1919	0.0012983	-4.142	-0.0024533	-1.95	-0.001155	592.3119070528281	47.076	0.7347	48.459	48.09	48.825	1.3825					32	22	2	0	0	0	0.54523	1	19750	19750		13.508	0.46542	1	1174400			10125	7484	4936	4959	12379	12379					0.02805208173185747
HWQKRRFL	8	Unmodified	_HWQKRRFL_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:31904270-32000328:+|nuORF;nc|ENSG00000198089|A8K8P3-5|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	390.892953	1169.65703	2.1506	0.00084067	2.4988	0.00097678	4.6495	0.0018174	390.893795332101	75.183	0.6447	76.489	76.28	76.925	1.3063					27	20	2	0	0	0	2.3239	1	31594	31594		1.8442	0	1	837930			10126	5041	4937	4960	12380	12380					0.07898775030730576
HWQLHRRLAM	10	Unmodified	_HWQLHRRLAM_					0	0	0		ENSG00000148795|ENST00000369887|CYP17A1	ENSG00000148795|ENST00000369887|CYP17A1	ENSG00000148795|ENST00000369887|CYP17A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9123107790947	3	449.912019	1346.71423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.653	1	13.44	12.94	13.94	0.78751								0	0	0	0.66254	1	5249	5249		0.15932	0	1				10127	3221	4938	4961	12381	12381					0.0547387424480803
HWRFKHKLHRK	11	Unmodified	_HWRFKHKLHRK_					0	0	0		ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	524.9762451052666	3	524.976011	1571.9062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.972	1	47.972	47.472	48.472	0								0	0	0	0.63775	1	20042	20042		0.40827	0	1				10128	5899	4939	4962	12382	12382					0.14312537987279939
HWRFKHKLHRK	11	Unmodified	_HWRFKHKLHRK_					0	0	0		ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9753906130791	3	524.976011	1571.9062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.254	1	26.516	26.016	27.016	0.26173								0	0	0	0.63775	1	10970	10970		0.40827	0.32491	1				10129	5899	4939	4962	12383	12383					0.14312537987279939
HWRFKHKLHRK	11	Unmodified	_HWRFKHKLHRK_					0	0	0		ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9753295779228	3	524.976011	1571.9062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.099	1	27.36	26.86	27.86	0.26173								0	0	0	0.63775	1	11330	11330		0.40827	0.32491	1				10130	5899	4939	4962	12384	12384					0.14312537987279939
HWRFKHKLHRK	11	Unmodified	_HWRFKHKLHRK_					0	0	0		ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	ENST00000333003.9_1_12:95434350-95442961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9764282107353	3	524.976011	1571.9062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.095	1	41.411	40.911	41.911	0.31683								0	0	0	0.63775	1	17268	17268		0.40827	0.32491	1				10131	5899	4939	4962	12385	12385					0.14312537987279939
HWRQCFYKSKK	11	Unmodified	_HWRQCFYKSKK_					0	0	0		ENST00000310862.11_1_13:45985504-45985891:-|nuORF;ENST00000519676.5_1_13:45985504-45992464:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2615234255791	3	504.262717	1509.76632	0.54646	0.00027556	-2.511	-0.0012662	-1.9646	-0.00099065	504.2616179750924	12.029	0.24641	12.029	11.88	12.127	0					17	7	3	0	0	0	1.0362	1	4980	4980		1.3296	0.11481	1	2182600			10132	5805	4940	4963	12386	12386					0.031829928678916986
HWRQCFYKSKK	11	Unmodified	_HWRQCFYKSKK_					0	0	0		ENST00000310862.11_1_13:45985504-45985891:-|nuORF;ENST00000519676.5_1_13:45985504-45992464:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2628356814384	3	504.262717	1509.76632	0.55864	0.0002817	-2.9535	-0.0014894	-2.3949	-0.0012077	504.26212267477	11.7	0.15676	11.789	11.679	11.836	0.089381					10	4	3	0	0	0	1.0224	1	4865	4865		2.4348	1.1051	1	870130			10133	5805	4940	4963	12387	12387					0.031829928678916986
HWRQCFYKSKK	11	Unmodified	_HWRQCFYKSKK_					0	0	0		ENST00000310862.11_1_13:45985504-45985891:-|nuORF;ENST00000519676.5_1_13:45985504-45992464:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	ENST00000310862.11_1_13:45985504-45985891:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	504.262717	1509.76632	-0.18263	-9.2095E-05	-3.5672	-0.0017988	-3.7498	-0.0018909	504.2609040389173	11.144	0.12265	11.813	11.765	11.887	0.66934	-0.064251	-0.0010904	NaN	2.4348	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292650			10134	5805	4940	4963							0.031829928678916986
HWVEYWPQ	8	Unmodified	_HWVEYWPQ_					0	0	0			REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	REV__nc|ENSG00000133657|Q9H7F0|ATP13A3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5107299685478	3	382.178536	1143.51378	0.059559	2.2762E-05	-2.6028	-0.00099474	-2.5433	-0.00097198	382.17775572204016	8.4768	0.11299	8.5531	8.4998	8.6128	0.07632					13	9	2	0	0	0	2.3239	1	3496	3496		7.2892	0.56607	1	222620	+		10135	9879	4941	4964	12388	12388					-0.052236968710076326
HWVPCHLRDK	10	Unmodified	_HWVPCHLRDK_					0	0	0		DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887512087822	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.787	1	13.886	13.386	14.386	0.09944								0	0	0	0.66151	1	5721	5721		1.9064	0.57673	1				10136	395	4942	4965	12389	12389					0.011907902252005442
HWYGMGCCA	9	Unmodified	_HWYGMGCCA_					0	0	0			REV__HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|139|3|anti-sense	REV__HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|139|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1242858767509	3	343.124281	1026.35101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.371	1	87.497	86.997	87.997	1.1265								0	0	0	0.42693	1	36384	36384		0.26902	0.26902	1		+		10137	8226	4943	4966	12390	12390					-0.16110862860523412
HYANVACA	8	Unmodified	_HYANVACA_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-4|TMPRSS3;nc|ENSG00000160183|P57727-2|TMPRSS3;ENST00000474596.5_1_21:43792873-43809176:-|nuORF	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.6890136599541	2	424.689613	847.364672	0.93721	0.00039802	-1.9589	-0.00083191	-1.0217	-0.00043389	424.68898366223726	78.532	0.28374	78.532	78.346	78.629	0					13	8	2	0	0	0	0.89176	1	32698	32698		0.79363	0	1	341250			10138	253	4944	4967	12391	12391					-0.06511545765420124
HYATLYFVF	9	Unmodified	_HYATLYFVF_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;nc|ENSG00000157823|P59780-2|AP3S2;ENST00000560224.1_1_15:90408823-90446582:-|nuORF;ENSG00000157823|ENST00000336418|AP3S2;nc|ENSG00000242498|Q7Z6K5-2|ARPIN;ENSG00000177879|ENST00000316788|AP3S1	ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENSG00000177879|ENST00000316788|AP3S1	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7921020388603	2	580.792392	1159.57023	3.1458	0.0018271	-0.66011	-0.00038339	2.4857	0.0014437	580.7905961397672	74.551	0.51328	75.859	75.671	76.184	1.3079					38	16	3	0	0	0	0.22519	1	31378	31378		30.225	8.4782	1	1029400			10139	7327;4466	4945	4968	12392	12392					-0.003170690343267779
HYATLYFVF	9	Unmodified	_HYATLYFVF_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;nc|ENSG00000157823|P59780-2|AP3S2;ENST00000560224.1_1_15:90408823-90446582:-|nuORF;ENSG00000157823|ENST00000336418|AP3S2;nc|ENSG00000242498|Q7Z6K5-2|ARPIN;ENSG00000177879|ENST00000316788|AP3S1	ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENSG00000177879|ENST00000316788|AP3S1	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.7919189333916	2	580.792392	1159.57023	2.9499	0.0017133	-1.5445	-0.00089706	1.4054	0.00081624	580.789657692429	74.113	0.67395	75.909	75.503	76.177	1.7962					52	21	3	0	0	0	0.22519	2	31077	31077;31131		30.225	10.968	1	1448600			10140	7327;4466	4945	4968	12393;12394	12393					-0.003170690343267779
HYDPTINKW	9	Unmodified	_HYDPTINKW_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2877685427666	2	587.288005	1172.56146	1.4059	0.00082567	-1.5569	-0.00091437	-0.15103	-8.8697E-05	587.2870738310673	24.311	0.37039	25.552	25.362	25.732	1.241					16	11	2	0	0	0	0.11643	1	10166	10166		43.858	33.784	1	612240			10141	4201	4946	4969	12395	12395					-0.01792042670808769
HYDPTINKW	9	Unmodified	_HYDPTINKW_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.2871581912041	2	587.288005	1172.56146	0.55524	0.00032609	-1.079	-0.0006337	-0.52379	-0.00030761	587.2869519082782	23.949	0.31032	25.634	25.443	25.753	1.6845					16	9	2	0	0	0	0.073578	1	9990	9990		58.679	46.147	1	522900			10142	4201	4946	4969	12396	12396					-0.01792042670808769
HYFDPQYFEF	10	Unmodified	_HYFDPQYFEF_					0	0	0		ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	696.7994872927666	2	696.798403	1391.58225	1.81	0.0012612	0.3898	0.00027161	2.1998	0.0015328	696.798769922042	68.522	1.5252	69.888	69.603	71.128	1.3657					115	49	5	0	0	0	0.06208	4	28784	28681;28732;28784;28823		125.53	89.023	1	23117000			10143	1051	4947	4970	12397;12398;12399;12400	12399					-0.09787497081833862
HYFDPQYFEF	10	Unmodified	_HYFDPQYFEF_					0	0	0		ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	696.7994262576103	2	696.798403	1391.58225	1.5127	0.0010541	0.46576	0.00032454	1.9785	0.0013786	696.798839370173	67.939	0.96614	69.809	69.519	70.485	1.87					89	30	5	0	0	0	0.064575	4	28547	28449;28495;28547;28586		137.42	93.651	1	25636000			10144	1051	4947	4970	12401;12402;12403;12404	12403					-0.09787497081833862
HYHLCSAP	8	Unmodified	_HYHLCSAP_					0	0	0		ENSG00000169105|ENST00000306243|CHST14;CHST14|p.A346T|1|0.18|ENSG00000169105|chr15:40472249-40472249|G/A|missense_variant	ENSG00000169105|ENST00000306243|CHST14	ENSG00000169105|ENST00000306243|CHST14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2130309939384	2	464.210712	926.406871	3.6973	0.0017163	1.6811	0.00078038	5.3784	0.0024967	464.21143027335006	82.209	0.47394	83.879	83.639	84.113	1.67					69	14	7	0	0	0	0.89008	1	34429	34429		2.5775	0.27475	1	8129400			10145	4068	4948	4971	12405	12405					-0.05927570357039258
HYICTSTK	8	Unmodified	_HYICTSTK_					0	0	0			REV__ENSG00000111863|ENST00000414691|ADTRP	REV__ENSG00000111863|ENST00000414691|ADTRP	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1545593142509	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.035	1	21.035	20.535	21.535	0								0	0	0	1.0178	1	8745	8745		3.9444	0.3479	1		+		10146	9346	4949	4972	12406	12406					-0.029264343883596666
HYIDAGYLGF	10	Unmodified	_HYIDAGYLGF_					0	0	0		ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.2794677615166	2	578.277106	1154.53966	0.49061	0.00028371	-0.41324	-0.00023897	0.077374	4.4743E-05	578.2767653502751	58.065	0.32219	59.483	59.339	59.661	1.4181					27	13	3	0	0	0	0.04351	2	24316	24316;24359		92.822	62.186	1	12089000			10147	1902	4950	4973	12407;12408	12407					-0.03142847419394457
HYIDAGYLGF	10	Unmodified	_HYIDAGYLGF_					0	0	0		ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.2776977419853	2	578.277106	1154.53966	0.37883	0.00021907	0.18022	0.00010421	0.55905	0.00032329	578.2769504004625	57.539	0.26656	59.508	59.387	59.653	1.9684					30	13	3	0	0	0	0.04351	2	24111	24111;24152		81.613	49.308	1	12600000			10148	1902	4950	4973	12409;12410	12409					-0.03142847419394457
HYIDDLVVI	9	Unmodified	_HYIDDLVVI_					0	0	0		ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7942382693291	2	543.795132	1085.57571	2.8251	0.0015363	-2.1133	-0.0011492	0.71172	0.00038703	543.793171195855	61.916	0.38074	63.334	63.176	63.556	1.4177					26	11	3	0	0	0	0.069258	2	25995	25945;25995		60.39	33.506	1	2253200			10149	2746	4951	4974	12411;12412	12412					0.03634609757477847
HYIDDLVVI	9	Unmodified	_HYIDDLVVI_					0	0	0		ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7949096560478	2	543.795132	1085.57571	2.197	0.0011947	-1.5296	-0.00083181	0.6674	0.00036293	543.7936192214539	61.396	0.44532	63.353	63.148	63.594	1.9571					22	13	2	0	0	0	0.09539	1	25744	25744		50.855	27.707	1	2472000			10150	2746	4951	4974	12413	12413					0.03634609757477847
HYILHNSFF	9	Unmodified	_HYILHNSFF_					0	0	0		ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2952758669853	2	589.293091	1176.57163	1.7339	0.0010218	3.0452	0.0017945	4.7791	0.0028163	589.2947336529512	41.95	0.40668	43.871	43.666	44.072	1.9211					36	12	4	0	0	0	0.01454	3	17585	17539;17585;17642		103.75	59.341	1	6650200			10151	3710	4952	4975	12414;12415;12416	12415					-0.009594349455710471
HYILHNSFF	9	Unmodified	_HYILHNSFF_					0	0	0		ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	ENSG00000163659|ENST00000295924|TIPARP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2935058474541	2	589.293091	1176.57163	1.835	0.0010814	2.1505	0.0012673	3.9855	0.0023486	589.2931972634485	42.629	0.45796	44.55	44.353	44.811	1.9211					21	14	2	0	0	0	0.12174	1	17925	17925		42.095	28.587	1	533190			10152	3710	4952	4975	12417	12417					-0.009594349455710471
HYINMPVQF	9	Unmodified	_HYINMPVQF_					0	0	0		ENST00000510237.5_1_18:13103579-13124766:+|nuORF;ENST00000540847.6_1_18:13088862-13124766:+|nuORF;ENST00000513432.5_1_18:13059017-13124766:+|nuORF;nc|ENSG00000101639|Q8TEP8-1|CEP192;ENSG00000101639|ENST00000506447|CEP192;ENST00000513183.1_1_18:13124610-13124766:+|nuORF	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	574.2859985232353	2	574.781502	1147.54845	1.6079	0.00092418	0.3494	0.00020083	1.9573	0.001125	574.7811580909826	54.661	0.49387	56.066	55.835	56.328	1.4048					33	15	3	0	0	0	0.08828	1	22904	22904		28.487	16.847	1	5373800			10153	1362	4953	4976	12418	12418					-0.01942197054540884
HYINMPVQF	9	Unmodified	_HYINMPVQF_					0	0	0		ENST00000510237.5_1_18:13103579-13124766:+|nuORF;ENST00000540847.6_1_18:13088862-13124766:+|nuORF;ENST00000513432.5_1_18:13059017-13124766:+|nuORF;nc|ENSG00000101639|Q8TEP8-1|CEP192;ENSG00000101639|ENST00000506447|CEP192;ENST00000513183.1_1_18:13124610-13124766:+|nuORF	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	574.2865478396416	2	574.781502	1147.54845	1.7905	0.0010292	0.40124	0.00023062	2.1918	0.0012598	574.7809096964055	54.161	0.47142	56.129	55.877	56.348	1.9684					39	14	4	0	0	0	0.097511	1	22705	22705		23.148	6.2061	1	5273600			10154	1362	4953	4976	12419	12419					-0.01942197054540884
HYLDTTTLI	9	Unmodified	_HYLDTTTLI_					0	0	0		ENSG00000167193|ENST00000300574|CRK;nc|ENSG00000167193|P46108-2|CRK;ENSG00000099942|ENST00000354336|CRKL;CRKL-LZTR1|1|fusion	ENSG00000167193|ENST00000300574|CRK;CRKL-LZTR1|1|fusion	ENSG00000167193|ENST00000300574|CRK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7853271365166	2	538.784764	1075.55498	1.5515	0.00083592	3.5419	0.0019083	5.0933	0.0027442	539.288875910526	45.651	0.31821	47.622	47.44	47.758	1.9703					23	9	3	0	0	0	0.34572	1	19117	19117		23.148	6.2061	1	1244400			10155	3953;374	4954	4977	12420	12420					0.02022019377795914
HYLDTTTLI	9	Unmodified	_HYLDTTTLI_					0	0	0		ENSG00000167193|ENST00000300574|CRK;nc|ENSG00000167193|P46108-2|CRK;ENSG00000099942|ENST00000354336|CRKL;CRKL-LZTR1|1|fusion	ENSG00000167193|ENST00000300574|CRK;CRKL-LZTR1|1|fusion	ENSG00000167193|ENST00000300574|CRK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	538.784764	1075.55498	1.7559	0.00094604	3.5501	0.0019127	5.3059	0.0028588	539.2876060352522	46.101	0.34596	47.476	47.271	47.617	1.3751	-0.072946	3.5458E-06	NaN	23.148	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1446900			10156	3953;374	4954	4977							0.02022019377795914
HYLLLPYLL	9	Unmodified	_HYLLLPYLL_					0	0	0		ENSG00000136247|ENST00000335965|ZDHHC4;ENST00000493944.5_1_7:6618325-6621932:+|nuORF;ENST00000474097.5_1_7:6620192-6623202:+|nuORF	ENSG00000136247|ENST00000335965|ZDHHC4	ENSG00000136247|ENST00000335965|ZDHHC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.8455078005791	2	572.841885	1143.66922	5.88	0.0033683	-1.8833	-0.0010788	3.9967	0.0022895	572.8421759107099	88.631	0.32201	89.687	89.466	89.788	1.0562					17	9	2	0	0	0	0.16975	1	37344	37344		36.466	18.331	1	561570			10157	2717	4955	4978	12421	12421					0.10312953930565527
HYLNVAFDL	9	Unmodified	_HYLNVAFDL_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2815429568291	2	546.279649	1090.54475	2.7123	0.0014817	-0.17222	-9.4082E-05	2.5401	0.0013876	546.2796824389086	61.952	0.7606	63.37	63.113	63.873	1.4177					53	23	3	0	0	0	0.013238	3	25990	25950;25990;26033		104.8	60.036	1	6240200			10158	1404	4956	4979	12422;12423;12424	12423					0.003094564432331026
HYLNVAFDL	9	Unmodified	_HYLNVAFDL_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2812377810478	2	546.279649	1090.54475	2.1982	0.0012008	-0.012935	-7.0659E-06	2.1853	0.0011938	546.2797630943268	61.375	0.78887	63.332	63.119	63.908	1.9571					56	24	3	0	0	0	0.026628	3	25768	25716;25768;25822		92.822	44.476	1	5469300			10159	1404	4956	4979	12425;12426;12427	12426					0.003094564432331026
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547729372978	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.687	1	20.687	20.187	21.187	0								0	0	0	1.0178	1	8600	8600		1.8442	0	1				10160	7678	4957	4980	12428	12428					-0.029264343883710353
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548034548759	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.278	1	21.278	20.778	21.778	0								0	0	0	1.0178	1	8847	8847		1.8442	0	1				10161	7678	4957	4980	12429	12429					-0.029264343883710353
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548950076103	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.842	1	21.842	21.342	22.342	0								0	0	0	1.0178	1	9084	9084		0.45834	0	1				10162	7678	4957	4980	12430	12430					-0.029264343883710353
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548950076103	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.961	1	21.961	21.461	22.461	0								0	0	0	1.0178	1	9134	9134		0.45834	0	1				10163	7678	4957	4980	12431	12431					-0.029264343883710353
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1549255251884	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.178	1	22.178	21.678	22.678	0								0	0	0	1.0178	1	9225	9225		0.45834	0	1				10164	7678	4957	4980	12432	12432					-0.029264343883710353
HYLTSKCT	8	Unmodified	_HYLTSKCT_					0	0	0		L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|59|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548644900322	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.331	1	22.331	21.831	22.831	0								0	0	0	1.0178	1	9289	9289		0.45834	0	1				10165	7678	4957	4980	12433	12433					-0.029264343883710353
HYLYQIAHL	9	Unmodified	_HYLYQIAHL_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.3088867068291	2	579.308741	1156.60293	2.205	0.0012774	-1.2281	-0.00071143	0.97695	0.00056595	579.8076779452346	40.744	0.28183	42.069	41.897	42.178	1.3254					11	8	2	0	0	0	0.64949	1	17124	17124		9.3474	4.1168	1	410990			10166	4895;15952	4958	4981	12434	12434					0.030891380884895625
HYMHRYQHRDR	11	Unmodified	_HYMHRYQHRDR_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	534.2193481326103	3	533.588375	1597.7433	0.64289	0.00034304	-0.7412	-0.0003955	-0.098312	-5.2458E-05	533.5877907136975	19.351	0.35692	19.545	19.387	19.744	0.19342					23	11	4	0	0	0	0.14606	1	7972	7972		0.36667	0.28332	1	1020100			10167	7680	4959	4982	12435	12435					-0.03166633196883595
HYMHRYQHRDR	11	Unmodified	_HYMHRYQHRDR_					0	0	0		L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	L1M2_dup9102|chr21:15781465-15783675:+|1.9878716944661228|0.1805436335784144|3.46|428.0|38|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	533.588375	1597.7433	0.71322	0.00038057	0.010475	5.5894E-06	0.7237	0.00038616	533.9235085264743	18.641	0.20556	19.621	19.506	19.711	0.97922	-0.03747	0.001027	NaN	0.36667	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587410			10168	7680	4959	4982							-0.03166633196883595
HYMPPPYASL	10	Unmodified	_HYMPPPYASL_					0	0	0		ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111	ENSG00000157450|ENST00000348370|RNF111	ENSG00000157450|ENST00000348370|RNF111	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2802612185478	2	588.281334	1174.54812	2.357	0.0013866	-0.31138	-0.00018318	2.0456	0.0012034	588.2803600509427	40.857	0.78816	42.183	41.991	42.779	1.3254					55	24	3	0	0	0	0.069382	2	17189	17111;17189		70.716	44.447	1	814880			10169	3472	4960	4983	12436;12437	12437					-0.03217616774418275
HYMPPPYASL	10	Unmodified	_HYMPPPYASL_					0	0	0		ENSG00000157450|ENST00000348370|RNF111;nc|ENSG00000157450|Q6ZNA4|RNF111;nc|ENSG00000157450|Q6ZNA4-4|RNF111;nc|ENSG00000157450|Q6ZNA4-3|RNF111	ENSG00000157450|ENST00000348370|RNF111	ENSG00000157450|ENST00000348370|RNF111	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2804443240166	2	588.281334	1174.54812	2.1114	0.0012421	-0.99619	-0.00058604	1.1152	0.00065603	588.2794774726253	40.53	0.65881	42.393	42.143	42.802	1.8624					44	20	3	0	0	0	0.10239	2	17004	16952;17004		63.563	37.295	1	868030			10170	3472	4960	4983	12438;12439	12439					-0.03217616774418275
HYPLNTVTF	9	Unmodified	_HYPLNTVTF_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1;ENST00000490566.1_1_2:218669184-218678576:-|nuORF	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2803222537041	2	546.279649	1090.54475	1.5389	0.00084066	-1.1608	-0.00063414	0.37804	0.00020652	546.2788883787036	43.326	0.48086	44.68	44.344	44.825	1.3536					38	15	3	0	0	0	0.091139	2	18142	18099;18142		52.268	19.483	1	2588600			10171	988	4961	4984	12440;12441	12441					0.003094564432331026
HYPLNTVTF	9	Unmodified	_HYPLNTVTF_					0	0	0		nc|ENSG00000079308|Q9HBL0-1|TNS1;ENSG00000079308|ENST00000682258|TNS1;ENST00000490566.1_1_2:218669184-218678576:-|nuORF	nc|ENSG00000079308|Q9HBL0-1|TNS1	nc|ENSG00000079308|Q9HBL0-1|TNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2793456912041	2	546.279649	1090.54475	1.7895	0.00097758	-0.86583	-0.00047299	0.92369	0.00050459	546.2792984531314	42.613	0.54975	44.534	44.29	44.84	1.9211					38	17	3	0	0	0	0.066815	2	17871	17822;17871		61.357	21.408	1	2573500			10172	988	4961	4984	12442;12443	12443					0.003094564432331026
HYPPICLL	8	Unmodified	_HYPPICLL_					0	0	0			REV__ENST00000415992.5_1_9:139693810-139699267:+|nuORF	REV__ENST00000415992.5_1_9:139693810-139699267:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1726257205009	3	319.173846	954.499709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.33	1	28.077	27.577	28.577	1.747								0	0	0	1.0178	1	11012	11012		1.8442	0.77278	1		+		10173	12944	4962	4985	12444	12444					0.020639343763377838
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1906310915947	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1913	1	1.3384	0.83837	1.8384	0.14703								0	0	0	1.0178	1	491	491		1.8442	0	1		+		10174	9088	4963	4986	12445	12445					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1907226443291	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2975	1	1.4445	0.94453	1.9445	0.14703								0	0	0	1.0178	1	535	535		1.8442	0	1		+		10175	9088	4963	4986	12446	12446					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1915161013603	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.454	1	1.601	1.101	2.101	0.14703								0	0	0	1.0178	1	599	599		1.8442	0	1		+		10176	9088	4963	4986	12447	12447					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1917907595634	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.8	1	69.122	68.622	69.622	0.32224								0	0	0	1.0178	1	28799	28799		1.8442	0	1		+		10177	9088	4963	4986	12448	12448					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1925231814384	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.18	1	92.37	91.87	92.87	0.19042								0	0	0	1.0178	1	38600	38600		1.8442	0	1		+		10178	9088	4963	4986	12449	12449					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1914550662041	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.152	1	93.321	92.821	93.821	0.16835								0	0	0	1.0178	1	39001	39001		1.8442	0	1		+		10179	9088	4963	4986	12450	12450					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1910583376884	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.31376	1	0.98114	0.48114	1.4811	0.66738								0	0	0	1.0178	1	128	128		1.8442	0	1		+		10180	9088	4963	4986	12451	12451					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1911804080009	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.41677	1	1.0842	0.58415	1.5842	0.66738								0	0	0	1.0178	1	170	170		1.8442	0	1		+		10181	9088	4963	4986	12452	12452					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1905395388603	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.65486	1	1.3222	0.82224	1.8222	0.66738								0	0	0	1.0178	1	268	268		1.8442	0	1		+		10182	9088	4963	4986	12453	12453					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1913024783134	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0492	1	1.7025	1.2025	2.2025	0.65331								0	0	0	1.0178	1	429	429		1.8442	0	1		+		10183	9088	4963	4986	12454	12454					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1914245486259	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.10583	1	0.84162	0.34162	1.3416	0.73579								0	0	0	1.0178	1	42	42		1.8442	0	1		+		10184	9088	4963	4986	12455	12455					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1908447146416	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.22995	1	0.96574	0.46574	1.4657	0.73579								0	0	0	1.0178	1	94	94		1.8442	0	1		+		10185	9088	4963	4986	12456	12456					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1911193728447	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.32631	1	1.0621	0.56209	1.5621	0.73579								0	0	0	1.0178	1	134	134		1.8442	0	1		+		10186	9088	4963	4986	12457	12457					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1901733279228	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.49335	1	1.2291	0.72913	1.7291	0.73579								0	0	0	1.0178	1	203	203		1.8442	0	1		+		10187	9088	4963	4986	12458	12458					0.07647269519407018
HYPPVKVI	8	Unmodified	_HYPPVKVI_					0	0	0			REV__nc|ENSG00000102908|O94916-2|NFAT5	REV__nc|ENSG00000102908|O94916-2|NFAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1920349001884	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.862	1	82.558	82.058	83.058	1.6959								0	0	0	1.0178	1	33925	33925		1.8442	0	1		+		10188	9088	4963	4986	12459	12459					0.07647269519407018
HYPPVQVLF	9	Unmodified	_HYPPVQVLF_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.3003417849541	2	550.300384	1098.58622	0.37798	0.000208	0.093326	5.1358E-05	0.47131	0.00025936	550.3004178985573	57.503	0.88546	58.918	58.276	59.162	1.4145					78	41	2	0	0	0	0.098163	5	24073	23983;24028;24073;24119;24161		67.035	67.035	1	39880000			10189	1949	4964	4987	12460;12461;12462;12463;12464	12462					0.040866372025675446
HYPPVQVLF	9	Unmodified	_HYPPVQVLF_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.3008911013603	2	550.300384	1098.58622	0.7199	0.00039616	0.4886	0.00026888	1.2085	0.00066504	550.3006475580759	56.892	0.77323	58.86	58.364	59.137	1.9684					55	30	2	0	0	0	0.12251	5	23804	23715;23763;23804;23854;23903		56.541	31.142	1	38618000			10190	1949	4964	4987	12465;12466;12467;12468;12469	12467					0.040866372025675446
HYQAAKFIR	9	Unmodified	_HYQAAKFIR_					0	0	0			REV__ENST00000479383.5_1_1:44267185-44297359:+|nuORF	REV__ENST00000479383.5_1_1:44267185-44297359:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	567.8019286990166	2	567.314358	1132.61416	2.2339	0.0012673	-1.0832	-0.00061449	1.1508	0.00065284	567.3139017970802	44.36	0.28551	46.319	46.162	46.448	1.9596					13	8	2	0	0	0	0.11684	1	18645	18645		7.9102	0	1	1006300	+		10191	13336	4965	4988	12470	12470					0.053159601826337166
HYSENMFSF	9	Unmodified	_HYSENMFSF_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1;ENST00000504698.1_1_5:33456142-33459991:+|nuORF	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.2409545779228	2	581.237124	1160.45969	2.1747	0.001264	-0.2661	-0.00015467	1.9086	0.0011094	581.2374938680982	49.717	0.37435	51.108	50.918	51.292	1.3911					24	11	3	0	0	0	0.20671	2	20804	20804;20866		32.305	23.56	1	1143200			10192	1822	4966	4989	12471;12472	12471					-0.11411657084886428
HYSENMFSF	9	Unmodified	_HYSENMFSF_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1;ENST00000504698.1_1_5:33456142-33459991:+|nuORF	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.2397949099541	2	581.237124	1160.45969	1.7026	0.00098962	-0.039426	-2.2916E-05	1.6632	0.0009667	581.2373712293329	49.168	0.27839	51.145	51.008	51.286	1.9772					19	8	3	0	0	0	0.44512	2	20581	20581;20630		18.146	8.0724	1	1125900			10193	1822	4966	4989	12473;12474	12473					-0.11411657084886428
HYSLFPLLF	9	Unmodified	_HYSLFPLLF_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;INTS4-ALG8|4|fusion;INTS4-ALG8|3|fusion	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8104125857353	2	568.810585	1135.60662	4.2408	0.0024122	0.40216	0.00022876	4.643	0.002641	568.8110595596943	94.38	0.37208	95.121	94.919	95.291	0.74124					18	11	2	0	0	0	0.22519	1	39706	39706		30.225	3.3412	1	989700			10194	7658	4967	4990	12475	12475					0.04423807862372087
HYSLFPLLF	9	Unmodified	_HYSLFPLLF_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;INTS4-ALG8|4|fusion;INTS4-ALG8|3|fusion	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8113891482353	2	568.810585	1135.60662	3.2886	0.0018706	0.22635	0.00012875	3.515	0.0019993	568.8103979636211	93.801	0.37389	95.078	94.92	95.294	1.277					20	11	2	0	0	0	0.22519	1	39468	39468		30.225	9.7712	1	565220			10195	7658	4967	4990	12476	12476					0.04423807862372087
HYSPIYLSF	9	Unmodified	_HYSPIYLSF_					0	0	0		FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1	FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant	FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7820312380791	2	563.782025	1125.5495	3.27	0.0018436	-1.2791	-0.00072113	1.9909	0.0011224	563.7813381526132	60.882	0.28805	62.302	62.121	62.409	1.4196					24	8	4	0	0	0	0.051699	1	25526	25526		67.344	38.262	1	2182600			10196	992	4968	4991	12477	12477					-0.008256594140220841
HYSPIYLSF	9	Unmodified	_HYSPIYLSF_					0	0	0		FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant;ENST00000446331.6_1_8:11660331-11696115:+|nuORF;nc|ENSG00000079459|P37268-4|FDFT1;nc|ENSG00000079459|P37268-3|FDFT1;nc|ENSG00000079459|P37268-2|FDFT1;nc|ENSG00000079459|P37268-5|FDFT1;ENSG00000079459|ENST00000220584|FDFT1	FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant	FDFT1|p.S380C|1|0.04|ENSG00000079459|chr8:11838493-11838493|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7842285037041	2	563.782025	1125.5495	3.2667	0.0018417	-0.27391	-0.00015442	2.9928	0.0016873	563.7813930027393	60.265	0.40904	62.231	61.946	62.356	1.9653					25	12	3	0	0	0	0.09539	1	25307	25307		50.855	27.707	1	1462500			10197	992	4968	4991	12478	12478					-0.008256594140220841
HYSQELSLLYL	11	Unmodified	_HYSQELSLLYL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	683.3577758669853	2	683.356085	1364.69762	2.3063	0.001576	-0.085328	-5.831E-05	2.221	0.0015177	683.3564160878126	69.839	0.53245	71.193	70.896	71.429	1.3536					39	16	4	0	0	0	0.066063	2	29299	29299;29351		63.227	36.959	1	3261600			10198	5388	4969	4992	12479;12480	12479					0.029856070492087383
HYSQELSLLYL	11	Unmodified	_HYSQELSLLYL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	683.3589965701103	2	683.356085	1364.69762	1.3332	0.00091105	0.75298	0.00051455	2.0862	0.0014256	683.3567572416124	69.313	0.4677	71.166	70.92	71.387	1.853					27	14	2	0	0	0	0.16578	1	29071	29071		43.982	21.246	1	3112100			10199	5388	4969	4992	12481	12481					0.029856070492087383
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1551086306572	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.351	1	25.002	24.502	25.502	1.6511								0	0	0	1.0178	1	9751	9751		1.8442	0	1		+		10200	11788	4970	4993	12482	12482					-0.03263361170729695
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1548950076103	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.455	1	25.106	24.606	25.606	1.6511								0	0	0	1.0178	1	9794	9794		1.8442	0	1		+		10201	11788	4970	4993	12483	12483					-0.03263361170729695
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1546813845634	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.55	1	25.201	24.701	25.701	1.6511								0	0	0	1.0178	1	9834	9834		1.8442	0	1		+		10202	11788	4970	4993	12484	12484					-0.03263361170729695
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1546813845634	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.642	1	25.293	24.793	25.793	1.6511								0	0	0	1.0178	1	9872	9872		1.8442	0	1		+		10203	11788	4970	4993	12485	12485					-0.03263361170729695
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1548339724541	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.753	1	25.415	24.915	25.915	1.6621								0	0	0	1.0178	1	9919	9919		1.8442	0	1		+		10204	11788	4970	4993	12486	12486					-0.03263361170729695
HYVATNFT	8	Unmodified	_HYVATNFT_					0	0	0			REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	REV__nc|ENSG00000204544|Q5SSG8-3|MUC21	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1546203494072	3	318.15562	951.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.875	1	25.559	25.059	26.059	1.6845								0	0	0	1.0178	1	9969	9969		1.8442	0	1		+		10205	11788	4970	4993	12487	12487					-0.03263361170729695
HYWKHCLML	9	Unmodified	_HYWKHCLML_					0	0	0		ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	MSMS	GG20161007_CRH_Patient100_A02_01	1	615.8008300662041	2	615.799171	1229.58379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.603	1	76.603	76.103	77.103	0								0	0	0	0.42693	1	31891	31891		1.8442	0	1				10206	1958	4971	4994	12488	12488					-0.021818577984049625
HYWKHCLML	9	Unmodified	_HYWKHCLML_					0	0	0		ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	615.7999145388603	2	615.799171	1229.58379	1.9701	0.0012132	-0.40535	-0.00024961	1.5647	0.00096357	615.798438169449	77.06	1.4499	77.376	76.689	78.138	0.31653					74	45	3	0	0	0	0.83753	1	32209	32209		1.8442	0	1	1092600			10207	1958	4971	4994	12489	12489					-0.021818577984049625
HYWKHCLML	9	Unmodified	_HYWKHCLML_					0	0	0		ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	615.799171	1229.58379	2.2651	0.0013948	0.33076	0.00020368	2.5958	0.0015985	615.7989817476389	75.912	0.4205	77.206	77.068	77.488	1.2938	-0.18376	0.00069505	NaN	1.8442	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	736880			10208	1958	4971	4994							-0.021818577984049625
HYWKHCLML	9	Unmodified	_HYWKHCLML_					0	0	0		ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	615.799171	1229.58379	2.5552	0.0015735	1.8621	0.0011467	4.4173	0.0027202	616.3025444189304	75.448	0.33854	77.23	77.009	77.347	1.7817	-0.15994	0.002581	NaN	1.8442	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	543110			10209	1958	4971	4994							-0.021818577984049625
HYYQHYYFFFY	11	Unmodified	_HYYQHYYFFFY_					0	0	0		ENST00000510376.1_1_5:176332285-176333139:-|nuORF	ENST00000510376.1_1_5:176332285-176333139:-|nuORF	ENST00000510376.1_1_5:176332285-176333139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	839.3679687380791	2	839.361702	1676.70885	2.5423	0.0021339	0.79826	0.00067003	3.3405	0.0028039	839.3621493209752	80.767	0.30101	82	81.832	82.133	1.2332					23	9	3	0	0	0	1.0393	1	33883	33883		0.35063	0.35063	1	2876800			10210	7027	4972	4995	12490	12490					-0.10243570856687256
HYYQHYYFFFY	11	Unmodified	_HYYQHYYFFFY_					0	0	0		ENST00000510376.1_1_5:176332285-176333139:-|nuORF	ENST00000510376.1_1_5:176332285-176333139:-|nuORF	ENST00000510376.1_1_5:176332285-176333139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	839.3623535037041	2	839.361702	1676.70885	1.3428	0.0011271	1.4165	0.001189	2.7593	0.0023161	839.8646010804861	80.48	0.32755	82.197	81.996	82.324	1.7167					25	10	3	0	0	0	1.0393	1	33744	33744		0.35063	0.043601	1	2507400			10211	7027	4972	4995	12491	12491					-0.10243570856687256
IAAHSKHKRK	10	Unmodified	_IAAHSKHKRK_					0	0	0		ENST00000332687.10_1_X:73808967-73809075:-|nuORF	ENST00000332687.10_1_X:73808967-73809075:-|nuORF	ENST00000332687.10_1_X:73808967-73809075:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	392.5763122439384	3	392.575513	1174.70471	2.6289	0.001032	-0.16754	-6.5773E-05	2.4614	0.00096627	392.57559107718083	88.258	0.30893	88.493	88.322	88.631	0.23471					17	9	2	0	0	0	0.88278	1	36992	36992		3.3196	2.2099	1	1112500			10212	5897	4973	4996	12492	12492					0.12434429230916066
IAALKPYFL	9	Unmodified	_IAALKPYFL_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1396972537041	2	518.315503	1034.61645	2.0929	0.0010848	-1.642	-0.0008511	0.45085	0.00023368	518.314701401899	64.945	0.4438	64.945	64.753	65.197	0					16	13	2	0	0	0	0.11898	1	27041	27041		2.3027	0	1	565730	+		10213	15546	4974	4997	12493	12493					0.10052995867727077
IAARREPDEPH	11	Unmodified	_IAARREPDEPH_					0	0	0			REV__chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28	REV__chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.15	1	68.15	67.65	68.65	0								0	0	0	0.63775	1	28382	28382		0.45452	0	1		+		10214	8267	4975	4998	12494	12494					0.014409171638817497
IACFVVLFLI	10	Unmodified	_IACFVVLFLI_					0	0	0			REV__ENST00000502857.6_1_5:110002437-110003053:-|nuORF	REV__ENST00000502857.6_1_5:110002437-110003053:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2307006716728	3	379.896201	1136.66677	1.8925	0.00071895	-0.91273	-0.00034674	0.97977	0.00037221	380.22864652313694	70.291	0.84525	72.129	71.687	72.532	1.8378					36	26	2	0	0	0	0.87472	1	29415	29415		4.1895	0.60244	1	1889500	+		10215	13511	4976	4999	12495	12495					0.10390782201261572
IADNCPNDLI	10	Unmodified	_IADNCPNDLI_					0	0	0			REV__ENSG00000075131|ENST00000261881|TIPIN	REV__ENSG00000075131|ENST00000261881|TIPIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.7586547732353	2	544.258056	1086.50156	1.1662	0.00063474	-2.2867	-0.0012445	-1.1204	-0.0006098	544.7582089660676	97.801	0.1246	97.801	97.752	97.877	0					7	3	3	0	0	0	0.77604	1	40897	40897		14.838	2.3067	1	3113400	+		10216	8758	4977	5000	12496	12496					-0.03823101396369566
IADRLNVEF	9	Unmodified	_IADRLNVEF_					0	0	0		ENSG00000101911|ENST00000380668|PRPS2;nc|ENSG00000101911|P11908-2|PRPS2	ENSG00000101911|ENST00000380668|PRPS2	ENSG00000101911|ENST00000380668|PRPS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7910644412041	2	538.790381	1075.56621	2.3735	0.0012788	1.9959	0.0010754	4.3694	0.0023542	538.7897630195254	44.249	0.50375	46.193	45.831	46.335	1.9438					18	15	2	0	0	0	0.6486	1	18575	18575		9.3831	2.0939	1	625620			10217	1370	4978	5001	12497	12497					0.03144841471953441
IADVAVSPIL	10	Unmodified	_IADVAVSPIL_					0	0	0			REV__ENSG00000155850|ENST00000286298|SLC26A2	REV__ENSG00000155850|ENST00000286298|SLC26A2	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3002807497978	2	499.30005	996.585547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.466	1	90.466	89.966	90.966	0								0	0	0	0.65286	1	37810	37810		11.64	0.52583	1		+		10218	10504	4979	5002	12498	12498					0.08711797762850892
IADVSKTAVT	10	Unmodified	_IADVSKTAVT_					0	0	0			REV__tr|A0A553SNT5|A0A553SNT5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25070PE=4SV=1	REV__tr|A0A553SNT5|A0A553SNT5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7871581912041	2	502.784764	1003.55498	2.6822	0.0013486	-0.67546	-0.00033961	2.0067	0.001009	502.7834629872544	76.524	0.4388	77.817	77.575	78.014	1.2938					18	13	2	0	0	0	0.65574	1	32120	32120		20.454	3.3407	1	2221600	+		10219	15062	4980	5003	12499	12499					0.05334019377801269
IAEALNISI	9	Unmodified	_IAEALNISI_					0	0	0		tr|A0A7D6VTV1|A0A7D6VTV1_9CLOT2-C-methyl-D-erythritol2,4-cyclodiphosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=ispFPE=3SV=1	tr|A0A7D6VTV1|A0A7D6VTV1_9CLOT2-C-methyl-D-erythritol2,4-cyclodiphosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=ispFPE=3SV=1	tr|A0A7D6VTV1|A0A7D6VTV1_9CLOT2-C-methyl-D-erythritol2,4-cyclodiphosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=ispFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2778198122978	2	472.276575	942.538597	2.1582	0.0010193	-1.4345	-0.00067746	0.72375	0.00034181	472.27623889875235	69.263	0.22917	70.629	70.472	70.701	1.3657					11	7	2	0	0	0	0.087207	1	29078	29078		53.576	2.7205	1	1627400			10220	16931	4981	5004	12500	12500					0.06502938211713172
IAEFLVANK	9	Unmodified	_IAEFLVANK_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7947570681572	2	502.792392	1003.57023	2.3987	0.0012061	0.62129	0.00031238	3.02	0.0015184	502.7924523865851	47.712	0.50737	49.094	48.759	49.266	1.3825					38	12	4	0	0	0	0.20671	1	19906	19906		32.305	0	1	14577000	+		10221	11372	4982	5005	12501	12501					0.06858930965665877
IAFEFPVLV	9	Unmodified	_IAFEFPVLV_					0	0	0		nc|ENSG00000134508|Q8TDN4-3|CABLES1;nc|ENSG00000134508|Q8TDN4-4|CABLES1;nc|ENSG00000134508|Q8TDN4-2|CABLES1;ENSG00000134508|ENST00000256925|CABLES1	nc|ENSG00000134508|Q8TDN4-3|CABLES1	nc|ENSG00000134508|Q8TDN4-3|CABLES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.591235339642	1	1034.5921	1033.58482	3.0835	0.0031901	-2.7525	-0.0028477	0.33103	0.00034248	1034.5896477891722	97.178	0.11852	97.463	97.39	97.509	0.28442					7	3	3	0	0	0	0.046276	1	40881	40881		70.716	22.37	1	28944000			10222	2619	4983	5006	12502	12502					0.06937003113807805
IAFEFPVLV	9	Unmodified	_IAFEFPVLV_					0	0	0		nc|ENSG00000134508|Q8TDN4-3|CABLES1;nc|ENSG00000134508|Q8TDN4-4|CABLES1;nc|ENSG00000134508|Q8TDN4-2|CABLES1;ENSG00000134508|ENST00000256925|CABLES1	nc|ENSG00000134508|Q8TDN4-3|CABLES1	nc|ENSG00000134508|Q8TDN4-3|CABLES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.8010742068291	2	517.799686	1033.58482	3.3964	0.0017586	-1.7629	-0.00091284	1.6335	0.0008458	517.7987633929083	97.06	0.15117	97.366	97.258	97.409	0.3062					10	4	3	0	0	0	0.02596	1	40818	40818		93.883	49.476	1	12170000			10223	2619	4983	5006	12503	12503					0.06937003113807805
IAFFTTASV	9	Unmodified	_IAFFTTASV_					0	0	0		nc|ENSG00000173662|Q7RTX1-2|TAS1R1;ENSG00000173662|ENST00000333172|TAS1R1	nc|ENSG00000173662|Q7RTX1-2|TAS1R1	nc|ENSG00000173662|Q7RTX1-2|TAS1R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7581054568291	2	478.758018	955.501483	2.2592	0.0010816	-2.2711	-0.0010873	-0.011901	-5.6976E-06	478.75692038763395	68.19	0.40285	69.568	69.334	69.737	1.3778					40	12	4	0	0	0	0.03795	3	28600	28559;28600;28644		77.984	14.421	1	17063000			10224	4295	4984	5007	12504;12505;12506	12505					0.02195266665944473
IAFFTTASV	9	Unmodified	_IAFFTTASV_					0	0	0		nc|ENSG00000173662|Q7RTX1-2|TAS1R1;ENSG00000173662|ENST00000333172|TAS1R1	nc|ENSG00000173662|Q7RTX1-2|TAS1R1	nc|ENSG00000173662|Q7RTX1-2|TAS1R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7577697634697	2	478.758018	955.501483	1.7646	0.00084483	-2.5024	-0.001198	-0.73773	-0.0003532	478.75672519601585	67.634	0.40517	69.504	69.299	69.704	1.87					38	12	4	0	0	0	0.03795	1	28378	28378		77.984	14.421	1	15563000			10225	4295	4984	5007	12507	12507					0.02195266665944473
IAFLPAFIV	9	Unmodified	_IAFLPAFIV_					0	0	0			REV__nc|ENSG00000163630|Q8TBG9|SYNPR	REV__nc|ENSG00000163630|Q8TBG9|SYNPR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.5707275271416	2	495.804771	989.59499	1.8336	0.00090908	-2.7903	-0.0013834	-0.95674	-0.00047436	495.8035312668721	43.478	0.24111	44.831	44.677	44.918	1.3536					13	7	2	0	0	0	0.099861	1	18215	18215		20.871	3.7847	1	1368500	+		10226	14472	4985	5008	12508	12508					0.09977610839041517
IAFLPAFIV	9	Unmodified	_IAFLPAFIV_					0	0	0			REV__nc|ENSG00000163630|Q8TBG9|SYNPR	REV__nc|ENSG00000163630|Q8TBG9|SYNPR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	496.5711242556572	2	495.804771	989.59499	1.8437	0.00091411	-3.3526	-0.0016622	-1.5089	-0.00074811	495.80313879027204	42.803	0.2693	44.724	44.601	44.87	1.9211					14	8	2	0	0	0	0.116	1	17967	17967		9.3474	0.75416	1	1033400	+		10227	14472	4985	5008	12509	12509					0.09977610839041517
IAFPTSISV	9	Unmodified	_IAFPTSISV_					0	0	0		ENST00000550166.1_1_12:56500490-56500880:+|nuORF;ENST00000418595.1_1_6:112938557-112938875:-|nuORF;ENST00000473864.1_1_3:156528118-156528448:-|nuORF;ENST00000414718.1_1_20:12360810-12361446:+|nuORF;nc|ENSG00000170515|Q9UQ80-2|PA2G4;ENSG00000170515|ENST00000303305|PA2G4	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	934.5269653201103	1	934.52441	933.517133	2.3777	0.002222	0.25805	0.00024115	2.6357	0.0024631	934.5245281211992	68.19	0.49294	69.568	69.303	69.796	1.3778					50	15	4	0	0	0	0.03795	4	28626	28543;28587;28626;28665		77.984	10.64	1	73947000			10228	4151	4986	5009	12510;12511;12512;12513	12512					0.04771553183013566
IAFPTSISV	9	Unmodified	_IAFPTSISV_					0	0	0		ENST00000550166.1_1_12:56500490-56500880:+|nuORF;ENST00000418595.1_1_6:112938557-112938875:-|nuORF;ENST00000473864.1_1_3:156528118-156528448:-|nuORF;ENST00000414718.1_1_20:12360810-12361446:+|nuORF;nc|ENSG00000170515|Q9UQ80-2|PA2G4;ENSG00000170515|ENST00000303305|PA2G4	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7671081423759	2	467.765843	933.517133	2.3386	0.0010939	0.68943	0.00032249	3.028	0.0014164	467.76617277128844	68.159	0.46336	69.537	69.303	69.766	1.3778					49	14	5	0	0	0	0.033521	2	28588	28588;28639		81.864	20.513	1	46665000			10229	4151	4986	5009	12514;12515	12514					0.04771553183013566
IAFPTSISV	9	Unmodified	_IAFPTSISV_					0	0	0		ENST00000550166.1_1_12:56500490-56500880:+|nuORF;ENST00000418595.1_1_6:112938557-112938875:-|nuORF;ENST00000473864.1_1_3:156528118-156528448:-|nuORF;ENST00000414718.1_1_20:12360810-12361446:+|nuORF;nc|ENSG00000170515|Q9UQ80-2|PA2G4;ENSG00000170515|ENST00000303305|PA2G4	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	934.5260497927666	1	934.52441	933.517133	1.9668	0.001838	-0.13798	-0.00012894	1.8288	0.001709	934.5242086250013	67.663	0.49834	69.533	69.268	69.767	1.87					52	15	5	0	0	0	0.03795	4	28403	28320;28364;28403;28442		77.984	9.8725	1	73401000			10230	4151	4986	5009	12516;12517;12518;12519	12518					0.04771553183013566
IAFPTSISV	9	Unmodified	_IAFPTSISV_					0	0	0		ENST00000550166.1_1_12:56500490-56500880:+|nuORF;ENST00000418595.1_1_6:112938557-112938875:-|nuORF;ENST00000473864.1_1_3:156528118-156528448:-|nuORF;ENST00000414718.1_1_20:12360810-12361446:+|nuORF;nc|ENSG00000170515|Q9UQ80-2|PA2G4;ENSG00000170515|ENST00000303305|PA2G4	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	ENST00000550166.1_1_12:56500490-56500880:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7666503787041	2	467.765843	933.517133	2.096	0.00098045	-0.051761	-2.4212E-05	2.0443	0.00095624	467.7658492064296	67.634	0.46776	69.504	69.268	69.736	1.87					47	14	4	0	0	0	0.03795	2	28365	28365;28416		77.984	10.326	1	65071000			10231	4151	4986	5009	12520;12521	12520					0.04771553183013566
IAFSLGSMGF	10	Unmodified	_IAFSLGSMGF_					0	0	0		nc|ENSG00000166507|P52849-2|NDST2;ENSG00000166507|ENST00000309979|NDST2	nc|ENSG00000166507|P52849-2|NDST2	nc|ENSG00000166507|P52849-2|NDST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2621948122978	2	515.257328	1028.5001	1.5932	0.0008209	4.4434	0.0022895	6.0366	0.0031104	515.2612806422095	48.792	0.5542	50.18	49.833	50.388	1.388					34	17	3	0	0	0	0.38674	1	20433	20433		34.102	0	1	4717500			10232	3907	4987	5010	12522	12522					-0.013006906944383445
IAFSLGSMGF	10	Unmodified	_IAFSLGSMGF_					0	0	0		nc|ENSG00000166507|P52849-2|NDST2;ENSG00000166507|ENST00000309979|NDST2	nc|ENSG00000166507|P52849-2|NDST2	nc|ENSG00000166507|P52849-2|NDST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2604247927666	2	515.257328	1028.5001	2.438	0.0012562	3.1394	0.0016176	5.5774	0.0028738	515.2605217485113	48.264	0.55402	50.241	49.868	50.422	1.9772					41	17	4	0	0	0	0.48057	1	20214	20214		28.487	0	1	5118500			10233	3907	4987	5010	12523	12523					-0.013006906944383445
IAFSRPVKY	9	Unmodified	_IAFSRPVKY_					0	0	0		MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant;ENSG00000198909|ENST00000361733|MAP3K3;nc|ENSG00000198909|Q99759-2|MAP3K3	MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant	MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.8784057497978	3	360.878198	1079.61277	0.16252	5.8649E-05	0.69332	0.0002502	0.85584	0.00030885	360.8782467274592	23.963	0.24789	25.204	25.052	25.3	1.241					15	7	3	0	0	0	0.52273	1	10037	10037		14.405	2.1647	1	997830			10234	5100	4988	5011	12524	12524					0.07614326093903401
IAFSRPVKY	9	Unmodified	_IAFSRPVKY_					0	0	0		MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant;ENSG00000198909|ENST00000361733|MAP3K3;nc|ENSG00000198909|Q99759-2|MAP3K3	MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant	MAP3K3|p.E159Rfs*26|1|0.07|ENSG00000198909|chr17:63667026-63667027|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	360.878198	1079.61277	0.17263	6.2298E-05	0.088695	3.2008E-05	0.26132	9.4306E-05	360.8779456501617	23.534	0.2483	25.185	25.023	25.271	1.6511	-0.0093742	-0.00041905	NaN	14.405	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	686630			10235	5100	4988	5011							0.07614326093903401
IAGATLSIAAL	11	Unmodified	_IAGATLSIAAL_					0	0	0			REV__ENSG00000107020|ENST00000223864|PLGRKT	REV__ENSG00000107020|ENST00000223864|PLGRKT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8064147830009	2	500.8055	999.596446	2.2445	0.001124	1.2846	0.00064334	3.5291	0.0017674	500.8058997953312	40.105	0.31276	40.418	40.227	40.539	0.31263					22	9	3	0	0	0	0.17773	1	16900	16900		41.84	5.3334	1	3261300	+		10236	9218	4989	5012	12525	12525					0.09663200137140393
IAGDKEEFL	9	Unmodified	_IAGDKEEFL_					0	0	0		tr|A0A553SMP6|A0A553SMP6_NIACIIDEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23010PE=4SV=1	tr|A0A553SMP6|A0A553SMP6_NIACIIDEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23010PE=4SV=1	tr|A0A553SMP6|A0A553SMP6_NIACIIDEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23010PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	511.8171874880791	2	511.263665	1020.51278	2.6808	0.0013706	-0.19954	-0.00010202	2.4812	0.0012686	511.26349890458596	76.679	0.76981	78.447	78.095	78.865	1.7672					31	23	2	0	0	0	0.11684	1	32314	32314		7.9102	0	1	1143400			10237	16384	4990	5013	12526	12526					0.003340439694284214
IAGILFVTMI	10	Unmodified	_IAGILFVTMI_					0	0	0		nc|ENSG00000165194|Q8TAB3-3|PCDH19;chrX:100342072-100350646|343|13.98|0.63|4.47|-|ENST00000420881|PCDH19,PCDH19;nc|ENSG00000165194|Q8TAB3-2|PCDH19;ENSG00000165194|ENST00000373034|PCDH19	nc|ENSG00000165194|Q8TAB3-3|PCDH19	nc|ENSG00000165194|Q8TAB3-3|PCDH19	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	538.7979614138603	2	539.322471	1076.63039	1.8207	0.00098194	2.4396	0.0013157	4.2603	0.0022977	539.3228500182837	66.205	0.92741	68.094	67.54	68.467	1.8889					72	29	4	0	0	0	0.12397	1	27593	27593		21.747	4.8044	1	4530400			10238	300	4991	5014	12527	12527					0.09513905304538639
IAGIVVTAVAY	11	Unmodified	_IAGIVVTAVAY_					0	0	0		ENSG00000166292|ENST00000424486|TMEM100	ENSG00000166292|ENST00000424486|TMEM100	ENSG00000166292|ENST00000424486|TMEM100	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.3094970583916	2	538.82115	1075.62775	1.8439	0.00099352	2.1985	0.0011846	4.0423	0.0021781	538.8225001812591	49.423	0.84114	51.4	50.947	51.788	1.9772					52	26	3	0	0	0	0.14606	1	20862	20862		9.3831	3.1773	1	14615000			10239	3892	4992	5015	12528	12528					0.0929577317122039
IAGLLSICMNY	11	Unmodified	_IAGLLSICMNY_					0	0	0			REV__SLC12A2|p.W714C|1|0.73|ENSG00000064651|chr5:128151275-128151275|G/T|missense_variant	REV__SLC12A2|p.W714C|1|0.73|ENSG00000064651|chr5:128151275-128151275|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.8716308474541	3	399.871727	1196.59335	2.5033	0.001001	-0.77886	-0.00031144	1.7244	0.00068954	399.8714309884311	58.057	0.19165	58.38	58.3	58.492	0.32298					9	5	2	0	0	0	1.0084	1	24329	24329		1.3296	0	1	777460	+		10240	14623	4993	5016	12529	12529					0.002918656964766342
IAGPVLWAL	9	Unmodified	_IAGPVLWAL_					0	0	0			REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2866699099541	2	470.286746	938.558939	1.9911	0.00093641	-2.3891	-0.0011235	-0.39792	-0.00018713	470.2853507485366	96.758	0.076958	96.758	96.695	96.772	0					4	2	2	0	0	0	0.51832	1	40454	40454		14.582	2.9414	1	4580500	+		10241	13249	4994	5017	12530	12530					0.08720153662159191
IAGPVLWAL	9	Unmodified	_IAGPVLWAL_					0	0	0			REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2872802615166	2	470.286746	938.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.062	1	96.464	95.964	96.964	0.40208								0	0	0	0.39421	1	40411	40411		9.3474	0	1		+		10242	13249	4994	5017	12531	12531					0.08720153662159191
IAGPVLWAL	9	Unmodified	_IAGPVLWAL_					0	0	0			REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	470.286746	938.558939	1.9911	0.00093641	-2.3891	-0.0011235	-0.39792	-0.00018713	470.2853507485366	96.758	0.076958	96.758	96.695	96.772	0	0.068936	0.0015459	NaN	14.582	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4580500	+		10243	13249	4994	5017							0.08720153662159191
IAGPVLWAL	9	Unmodified	_IAGPVLWAL_					0	0	0			REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	REV__ENST00000467699.5_1_17:7605498-7605885:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	470.286746	938.558939	3.4421	0.0016188	-4.8112	-0.0022627	-1.3692	-0.0006439	470.28436025715513	96.515	0.18169	96.62	96.573	96.755	0.105	-0.068936	-0.00073235	NaN	14.582	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5483400	+		10244	13249	4994	5017							0.08720153662159191
IAGPYNRLV	9	Unmodified	_IAGPYNRLV_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	501.2943298220634	2	501.790184	1001.56581	1.8387	0.00092262	4.4291	0.0022225	6.2678	0.0031451	501.7919119495905	64.788	0.25725	64.788	64.592	64.849	0					11	7	2	0	0	0	0.11333	1	27007	27007		0.52476	0.52476	1	220540			10245	1932	4995	5018	12532	12532					0.06509466542763676
IAGTTALAIL	10	Unmodified	_IAGTTALAIL_					0	0	0			REV__tr|A0A7D6VMY7|A0A7D6VMY7_9CLOTNa/PicotransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16730PE=4SV=1	REV__tr|A0A7D6VMY7|A0A7D6VMY7_9CLOTNa/PicotransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16730PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2966796755791	2	472.294768	942.574983	2.3116	0.0010918	-0.17396	-8.2162E-05	2.1376	0.0010096	472.2947879433586	42.767	0.3687	42.767	42.541	42.91	0					29	11	3	0	0	0	0.09859	1	17856	17856		64.236	0	1	3881200	+		10246	15326	4996	5019	12533	12533					0.10139815108414041
IAGTTALAIL	10	Unmodified	_IAGTTALAIL_					0	0	0			REV__tr|A0A7D6VMY7|A0A7D6VMY7_9CLOTNa/PicotransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16730PE=4SV=1	REV__tr|A0A7D6VMY7|A0A7D6VMY7_9CLOTNa/PicotransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16730PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2960998415947	2	472.294768	942.574983	2.3156	0.0010936	-1.5667	-0.00073993	0.74893	0.00035372	472.2939552466058	40.237	0.49651	42.1	41.862	42.359	1.8624					41	15	4	0	0	0	0.04351	2	16821	16821;16907		92.822	0	1	13000000	+		10247	15326	4996	5019	12534;12535	12534					0.10139815108414041
IAGVPITLQT	10	Unmodified	_IAGVPITLQT_					0	0	0		tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	506.3084899783134	2	506.8055	1011.59645	2.0938	0.0010611	-3.6545	-0.0018521	-1.5607	-0.00079097	506.804152845265	78.316	0.095139	78.625	78.579	78.674	0.30933					4	2	2	0	0	0	0.12475	1	32736	32736		12.532	0.89125	1	330660			10248	16368	4997	5020	12536	12536					0.09111200137124342
IAHLEITAL	9	Unmodified	_IAHLEITAL_					0	0	0		nc|ENSG00000163728|Q96N46-3|TTC14;nc|ENSG00000163728|Q96N46-2|TTC14;ENSG00000163728|ENST00000296015|TTC14	nc|ENSG00000163728|Q96N46-3|TTC14	nc|ENSG00000163728|Q96N46-3|TTC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.7932006716728	2	490.792392	979.570232	0.6925	0.00033988	-1.435	-0.00070428	-0.74247	-0.0003644	490.7931173621205	51.262	0.43063	52.656	52.437	52.868	1.3938					26	13	3	0	0	0	0.061246	2	21436	21436;21490		63.563	16.642	1	1878700			10249	3717	4998	5021	12537;12538	12537					0.07962930965641135
IAHLKYQI	8	Unmodified	_IAHLKYQI_					0	0	0			REV__tr|A0A553STY7|A0A553STY7_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05970PE=3SV=1	REV__tr|A0A553STY7|A0A553STY7_NIACIROKfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05970PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2949096560478	2	493.295102	984.575651	2.4273	0.0011974	-0.78632	-0.00038789	1.641	0.0008095	493.2949860523372	78.462	0.88089	78.771	78.227	79.108	0.30932					58	27	3	0	0	0	0.89176	1	32739	32739		0.79363	0	1	1243200	+		10250	15271	4999	5022	12539	12539					0.08274654548119997
IAHRKFKIGG	10	Unmodified	_IAHRKFKIGG_					0	0	0		URI1-TYW1B|2|fusion;nc|ENSG00000277149|Q6NUM6-2|TYW1B;ENSG00000277149|ENST00000620995|TYW1B;ENSG00000198874|ENST00000359626|TYW1	URI1-TYW1B|2|fusion	URI1-TYW1B|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2346069216728	3	376.232975	1125.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.04	1	103.11	102.61	103.61	0.062805								0	0	0	0.66218	1	43181	43181		0.77653	0.14971	1				10251	5097	5000	5023	12540	12540					0.11928525970688497
IAIAPLSDTV	10	Unmodified	_IAIAPLSDTV_					0	0	0			REV__tr|A0A7D6VTS4|A0A7D6VTS4_9CLOTP-typeCa(2+)transporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22375PE=4SV=1	REV__tr|A0A7D6VTS4|A0A7D6VTS4_9CLOTP-typeCa(2+)transporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22375PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2954894900322	2	500.289682	998.564812	2.3251	0.0011632	1.6215	0.00081122	3.9466	0.0019745	500.2914454698393	64.258	0.81428	66.186	65.704	66.518	1.928					61	25	3	0	0	0	0.51515	1	27021	27021		26.884	6.43	1	4513600	+		10252	15498	5001	5024	12541	12541					0.06547207383175646
IAIIILKVF	9	Unmodified	_IAIIILKVF_					0	0	0			REV__tr|A0A7D6ZS45|A0A7D6ZS45_9CLOTDUF2953domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14375PE=4SV=1	REV__tr|A0A7D6ZS45|A0A7D6ZS45_9CLOTDUF2953domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14375PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3588744997978	2	515.357171	1028.69979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.19	1	109.35	108.85	109.85	0.1548								0	0	0	0.42693	1	47301	47301		0.52476	0	1		+		10253	15701	5002	5025	12542	12542					0.18658732315589077
IAILDVLHRH	10	Unmodified	_IAILDVLHRH_					0	0	0		ENSG00000247746|ENST00000500968|USP51	ENSG00000247746|ENST00000500968|USP51	ENSG00000247746|ENST00000500968|USP51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2399780154228	3	396.240018	1185.69823	0.80965	0.00032081	-1.2522	-0.00049619	-0.4426	-0.00017538	396.23972202349523	38.142	0.34266	39.962	39.788	40.131	1.8202					25	10	3	0	0	0	0.46469	1	15982	15982		29.437	1.2035	1	3927600			10254	5368	5003	5026	12543	12543					0.11280491279558191
IAIPFLIKL	9	Unmodified	_IAIPFLIKL_					0	0	0		nc|ENSG00000100997|Q8N2K0-3|ABHD12;ENSG00000100997|ENST00000339157|ABHD12;nc|ENSG00000100997|Q8N2K0-2|ABHD12	nc|ENSG00000100997|Q8N2K0-3|ABHD12	nc|ENSG00000100997|Q8N2K0-3|ABHD12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3510009646416	2	514.349346	1026.68414	5.2019	0.0026756	0.0041552	2.1372E-06	5.2061	0.0026778	514.3493228104437	89.817	0.49453	90.837	90.588	91.083	1.0199					48	15	4	0	0	0	0.042029	4	37787	37787;37829;37868;37915		74.423	15.89	1	23508000			10255	1317	5004	5027	12544;12545;12546;12547	12544					0.17186445798552086
IAIPFLIKL	9	Unmodified	_IAIPFLIKL_					0	0	0		nc|ENSG00000100997|Q8N2K0-3|ABHD12;ENSG00000100997|ENST00000339157|ABHD12;nc|ENSG00000100997|Q8N2K0-2|ABHD12	nc|ENSG00000100997|Q8N2K0-3|ABHD12	nc|ENSG00000100997|Q8N2K0-3|ABHD12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3513671755791	2	514.349346	1026.68414	4.9278	0.0025346	-0.63093	-0.00032452	4.2969	0.0022101	514.3490221571005	89.308	0.49886	90.712	90.488	90.986	1.4044					45	15	4	0	0	0	0.042029	3	37585	37585;37632;37671		74.423	14.033	1	18863000			10256	1317	5004	5027	12548;12549;12550	12548					0.17186445798552086
IAIQWQLTI	9	Unmodified	_IAIQWQLTI_					0	0	0			REV__ENST00000486157.1_1_5:78825151-78825526:+|nuORF	REV__ENST00000486157.1_1_5:78825151-78825526:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3207275271416	2	543.321317	1084.62808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.866	1	52.866	52.366	53.366	0								0	0	0	0.317	1	22046	22046		16.942	0.79319	1		+		10257	13393	5005	5028	12551	12551					0.08915192891072365
IAIQWQLTI	9	Unmodified	_IAIQWQLTI_					0	0	0			REV__ENST00000486157.1_1_5:78825151-78825526:+|nuORF	REV__ENST00000486157.1_1_5:78825151-78825526:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3210327029228	2	543.321317	1084.62808	1.7174	0.0009331	-2.1886	-0.0011891	-0.47122	-0.00025602	543.3201706585832	52.3	0.18624	52.625	52.496	52.683	0.32554					8	5	2	0	0	0	0.34572	1	21913	21913		23.148	2.6948	1	448810	+		10258	13393	5005	5028	12552	12552					0.08915192891072365
IAKIDVSW	8	Unmodified	_IAKIDVSW_					0	0	0		tr|A0A7D6ZN53|A0A7D6ZN53_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14730PE=4SV=1	tr|A0A7D6ZN53|A0A7D6ZN53_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14730PE=4SV=1	tr|A0A7D6ZN53|A0A7D6ZN53_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14730PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1817199587822	3	311.179766	930.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.04	1	110.09	109.59	110.59	0.048843								0	0	0	1.0178	1	47487	47487		1.6526	0	1				10259	17117	5006	5029	12553	12553					0.049429729028588554
IAKIINLVK	9	Unmodified	_IAKIINLVK_					0	0	0		tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.2186462283134	3	337.902344	1010.6852	-1.327	-0.0004484	1.978	0.00066836	0.65096	0.00021996	337.9029657457699	59.441	0.31792	59.441	59.194	59.512	0					13	9	2	0	0	0	0.11901	1	24780	24780		0.23584	0	1	371220			10260	16742	5007	5030	12554	12554					0.18028660167453836
IAKIINLVK	9	Unmodified	_IAKIINLVK_					0	0	0		tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	tr|A0A7D6VNP9|A0A7D6VNP9_9CLOTNADPHdehydrogenaseNamAOS=ClostridiumintestinaleOX=36845GN=namAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.1989318728447	3	337.902344	1010.6852	1.6941	0.00057245	-2.0916	-0.00070674	-0.39743	-0.00013429	337.90182116876707	76.658	1.4957	78.425	77.72	79.215	1.7672					63	46	2	0	0	0	0.11938	1	32096	32096		1.1933	0	1	342380			10261	16742	5007	5030	12555	12555					0.18028660167453836
IAKRVRLR	8	Unmodified	_IAKRVRLR_					0	0	0			REV__ENST00000553883.1_1_14:94401004-94406176:-|nuORF	REV__ENST00000553883.1_1_14:94401004-94406176:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.1622192263603	3	337.901449	1010.68252	3.0359	0.0010258	2.246	0.00075894	5.2819	0.0017848	337.9022606450525	87.115	0.64031	88.207	88.034	88.674	1.0918					30	20	2	0	0	0	2.3239	1	36735	36735		0	0	1	349190	+		10262	9000	5008	5031	12556	12556					0.17760249553180074
IALAIWKLI	9	Unmodified	_IALAIWKLI_					0	0	0		THOC2|p.C384W|1|0.84|ENSG00000125676|chrX:123667144-123667144|G/C|missense_variant	THOC2|p.C384W|1|0.84|ENSG00000125676|chrX:123667144-123667144|G/C|missense_variant	THOC2|p.C384W|1|0.84|ENSG00000125676|chrX:123667144-123667144|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	347.2198974490166	3	347.567073	1039.67939	1.5892	0.00055236	1.5218	0.00052892	3.111	0.0010813	347.9015257278612	44.583	0.22313	46.542	46.448	46.671	1.9596					11	6	2	0	0	0	0.11216	1	18718	18718		7.609	2.7119	1	396220			10263	16021	5009	5032	12557	12557					0.16113561655788544
IALALIEPI	9	Unmodified	_IALALIEPI_					0	0	0			REV__tr|A0A553STQ7|A0A553STQ7_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_05565PE=4SV=1	REV__tr|A0A553STQ7|A0A553STQ7_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_05565PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2000915408134	2	476.807511	951.600469	3.927	0.0018724	2.6099	0.0012444	6.5369	0.0031168	476.8087101611053	96.808	0.087807	97.092	97.047	97.134	0.28442					4	2	2	0	0	0	0.090248	1	40725	40725		19.439	0	1	202410	+		10264	15254	5010	5033	12558	12558					0.12273289630843465
IALALIEPI	9	Unmodified	_IALALIEPI_					0	0	0			REV__tr|A0A553STQ7|A0A553STQ7_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_05565PE=4SV=1	REV__tr|A0A553STQ7|A0A553STQ7_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_05565PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2013732790947	2	476.807511	951.600469	3.3539	0.0015992	1.6837	0.00080282	5.0376	0.002402	476.8088945002152	96.683	0.093437	96.989	96.944	97.038	0.3062					4	2	2	0	0	0	0.090248	1	40688	40688		13.508	0	1	435280	+		10265	15254	5010	5033	12559	12559					0.12273289630843465
IALARKKGP	9	Unmodified	_IALARKKGP_					0	0	0		ATP8A1-CRMP1|1|fusion;ENST00000511535.1_1_4:5823489-5889136:-|nuORF;nc|ENSG00000072832|Q14194|CRMP1;ENST00000506216.5_1_4:5749932-5890196:-|nuORF;ENSG00000072832|ENST00000324989|CRMP1	ATP8A1-CRMP1|1|fusion	ATP8A1-CRMP1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	317.8771240115166	3	318.546671	952.618185	-0.9035	-0.00028781	3.8928	0.00124	2.9893	0.00095223	318.5479627895472	16.534	0.058123	17.432	17.387	17.445	0.89794					4	2	2	0	0	0	0.11941	1	6863	6863		1.0715	0.10919	1	378530			10266	91	5011	5034	12560	12560					0.13998049676376922
IALERRRAVRL	11	Unmodified	_IALERRRAVRL_					0	0	0		ENSG00000178015|ENST00000380007|GPR150	ENSG00000178015|ENST00000380007|GPR150	ENSG00000178015|ENST00000380007|GPR150	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.9707824587822	4	338.970385	1351.85244	0.34872	0.00011821	-2.0475	-0.00069405	-1.6988	-0.00057585	338.97023840668885	31.132	0.86855	32.957	32.461	33.33	1.8246					94	29	5	0	0	0	1.0365	1	12893	12893		1.2148	0.10508	1	4520700			10267	4469	5012	5035	12561	12561					0.19058320764906966
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8752319216728	3	342.874677	1025.6022	1.0272	0.0003522	0.26034	8.9263E-05	1.2875	0.00044146	342.8746265208564	36.497	0.72542	36.799	36.569	37.295	0.30197					125	48	4	0	0	0	0.82114	2	15403	15403;15486		2.4985	2.4985	1	15443000	+		10268	11004	5013	5036	12562;12563	12562					0.09042343439477918
IALFPRVPN	9	Unmodified	_IALFPRVPN_					0	0	0			REV__ENSG00000170950|ENST00000304801|PGK2	REV__ENSG00000170950|ENST00000304801|PGK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8744689822197	3	342.874677	1025.6022	-0.89696	-0.00030754	1.9054	0.00065333	1.0085	0.00034578	342.8752400954134	34.925	0.46817	36.2	35.962	36.43	1.2746					64	44	2	0	0	0	0.77025	1	14716	14716		4.5289	0.94181	1	13272000	+		10269	11004	5013	5036	12564	12564					0.09042343439477918
IALGLLTAV	9	Unmodified	_IALGLLTAV_					0	0	0		ENSG00000139187|ENST00000356986|KLRG1;KLRG1|p.E118*|1|0.04|ENSG00000139187|chr12:8995282-8995283|-/T|frameshift_variant;nc|ENSG00000139187|Q96E93|KLRG1	ENSG00000139187|ENST00000356986|KLRG1	ENSG00000139187|ENST00000356986|KLRG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	870.5665771365166	1	870.565881	869.558604	4.8195	0.0041957	-0.61458	-0.00053503	4.2049	0.0036606	870.5646786261689	89.828	0.40628	90.847	90.646	91.053	1.0199					17	12	2	0	0	0	0.030843	1	37845	37845		86.121	0	1	2549700			10270	2868	5014	5037	12565	12565					0.11860733942330626
IALGLLTAV	9	Unmodified	_IALGLLTAV_					0	0	0		ENSG00000139187|ENST00000356986|KLRG1;KLRG1|p.E118*|1|0.04|ENSG00000139187|chr12:8995282-8995283|-/T|frameshift_variant;nc|ENSG00000139187|Q96E93|KLRG1	ENSG00000139187|ENST00000356986|KLRG1	ENSG00000139187|ENST00000356986|KLRG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	870.5693847537041	1	870.565881	869.558604	4.5011	0.0039185	-0.88553	-0.00077091	3.6155	0.0031476	870.565455166675	89.346	0.30745	90.75	90.583	90.891	1.4045					16	9	2	0	0	0	0.033521	1	37682	37682		81.864	0	1	1748200			10271	2868	5014	5037	12566	12566					0.11860733942330626
IALKILHRK	9	Unmodified	_IALKILHRK_					0	0	0		ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	ENSG00000177613|ENST00000331173|CSTF2T	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1092.077929675579	1	1091.74116	1090.73388	1.0946	0.001195	1.7511	0.0019117	2.8456	0.0031067	1091.7420702107008	52.893	0.10593	54.863	54.793	54.899	1.9697					6	5	2	0	0	0	0.84963	1	22162	22162		0.6015	0	1	3687900			10272	4454	5015	5038	12567	12567					0.1921457352723337
IALLSSYSI	9	Unmodified	_IALLSSYSI_					0	0	0		ENST00000497336.1_1_X:48316945-48325440:-|nuORF;nc|ENSG00000017483|Q8WUX1-2|SLC38A5;ENSG00000017483|ENST00000620913|SLC38A5	ENST00000497336.1_1_X:48316945-48325440:-|nuORF	ENST00000497336.1_1_X:48316945-48325440:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.7789794802666	2	483.778951	965.543348	2.2281	0.0010779	-1.9932	-0.00096428	0.23491	0.00011364	483.7777536992857	76.645	0.32225	78.412	78.222	78.545	1.7672					16	9	2	0	0	0	0.24063	1	32184	32184		28.487	5.3384	1	1048500			10273	605	5016	5039	12568	12568					0.059198223544854045
IALSSCALF	9	Carbamidomethyl (C)	_IALSSC(Carbamidomethyl (C))ALF_	IALSSC(1)ALF		IALSSC(64)ALF		0	1	0		nc|ENSG00000185013|Q96P26-3|NT5C1B;NT5C1B|p.L549Sfs*12|1|0.06|ENSG00000185013|chr2:18563985-18563986|-/CTCCACCCATTGCAGGTTCTCCAGACAAGGAA|frameshift_variant;ENSG00000185013|ENST00000304081|NT5C1B;nc|ENSG00000185013|Q96P26-4|NT5C1B;nc|ENSG00000185013|Q96P26|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.2566406130791	2	491.257328	980.500103	1.4863	0.00073015	-3.2096	-0.0015767	-1.7233	-0.0008466	491.2559766280732	40.282	0.35377	40.282	40.073	40.427	0					25	10	3	0	0	0	0.061246	1	16881	16881		63.563	9.9873	1	1997200			10274	4726	5017	5040	12569	12569	7				0.00907309305534909
IALSSCALF	9	Carbamidomethyl (C)	_IALSSC(Carbamidomethyl (C))ALF_					0	1	0		nc|ENSG00000185013|Q96P26-3|NT5C1B;NT5C1B|p.L549Sfs*12|1|0.06|ENSG00000185013|chr2:18563985-18563986|-/CTCCACCCATTGCAGGTTCTCCAGACAAGGAA|frameshift_variant;ENSG00000185013|ENST00000304081|NT5C1B;nc|ENSG00000185013|Q96P26-4|NT5C1B;nc|ENSG00000185013|Q96P26|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	nc|ENSG00000185013|Q96P26-3|NT5C1B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	491.257328	980.500103	2.3469	0.001153	-4.9317	-0.0024227	-2.5847	-0.0012698	491.2554373642322	39.878	0.36377	40.19	39.986	40.35	0.31263	0.077435	-0.00081403	NaN	63.563	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2151600			10275	4726	5017	5040			7				0.00907309305534909
IALVFIDFQL	10	Unmodified	_IALVFIDFQL_					0	0	0		ENSG00000121904|ENST00000373381|CSMD2;nc|ENSG00000121904|Q7Z408|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	ENSG00000121904|ENST00000373381|CSMD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.8465453982353	2	589.844625	1177.6747	3.1327	0.0018478	-3.4559	-0.0020384	-0.32314	-0.0001906	589.8437110369587	64.871	0.24938	66.27	66.131	66.38	1.3989					13	7	2	0	0	0	0.70618	1	27206	27206		18.146	1.0335	1	2455500			10276	2145	5018	5041	12570	12570					0.09296632722362119
IANAALVAML	10	Unmodified	_IANAALVAML_					0	0	0			REV__nc|ENSG00000184908|P51801-2|CLCNKB	REV__nc|ENSG00000184908|P51801-2|CLCNKB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7879821658134	2	493.788795	985.563038	2.4245	0.0011972	2.6388	0.001303	5.0634	0.0025002	493.7915335774286	47.447	0.32187	48.83	48.695	49.017	1.3825					15	9	2	0	0	0	0.62746	1	19842	19842		21.747	2.4897	1	1979000	+		10277	8360	5019	5042	12571	12571					0.0696787509356227
IANAALVAML	10	Unmodified	_IANAALVAML_					0	0	0			REV__nc|ENSG00000184908|P51801-2|CLCNKB	REV__nc|ENSG00000184908|P51801-2|CLCNKB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.788795	985.563038	2.4245	0.0011972	2.6388	0.001303	5.0634	0.0025002	493.7915335774286	47.447	0.32187	48.83	48.695	49.017	1.3825	-0.076011	-0.00073128	NaN	21.747	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1979000	+		10278	8360	5019	5042							0.0696787509356227
IANAALVAML	10	Unmodified	_IANAALVAML_					0	0	0			REV__nc|ENSG00000184908|P51801-2|CLCNKB	REV__nc|ENSG00000184908|P51801-2|CLCNKB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	493.788795	985.563038	2.3558	0.0011633	4.2791	0.002113	6.6349	0.0032762	493.7918106605637	47.006	0.2869	48.982	48.838	49.125	1.976	0.076011	0.00088861	NaN	21.747	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1829100	+		10279	8360	5019	5042							0.0696787509356227
IAPAHGSVLI	10	Unmodified	_IAPAHGSVLI_					0	0	0		nc|ENSG00000138336|Q8NFU7-3|TET1;nc|ENSG00000138336|Q8NFU7-2|TET1;ENSG00000138336|ENST00000373644|TET1	nc|ENSG00000138336|Q8NFU7-3|TET1	nc|ENSG00000138336|Q8NFU7-3|TET1	MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2931701540947	2	489.292559	976.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.222	1	47.181	46.681	47.681	1.9596								0	0	0	0.55159	1	18949	18949		23.148	1.4018	1				10280	2825	5020	5043	12572	12572					0.0813435068552053
IAPDELVDI	9	Unmodified	_IAPDELVDI_					0	0	0			REV__ENSG00000083520|ENST00000377767|DIS3	REV__ENSG00000083520|ENST00000377767|DIS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7665283083916	2	492.76604	983.517527	2.9167	0.0014373	-0.31773	-0.00015657	2.599	0.0012807	492.76568375957925	62.066	1.6737	63.484	62.896	64.57	1.4177					112	53	3	0	0	0	0.12174	1	26048	26048		42.095	0	1	2276700	+		10281	8830	5021	5044	12573	12573					0.025109281121785898
IAPKMLVNFIV	11	Unmodified	_IAPKMLVNFIV_					0	0	0		ENSG00000150261|ENST00000279783|OR8K1	ENSG00000150261|ENST00000279783|OR8K1	ENSG00000150261|ENST00000279783|OR8K1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.5884887576103	3	415.586027	1243.73625	0.32911	0.00013677	4.0442	0.0016807	4.3733	0.0018175	415.5882867068741	18.99	0.18493	20.513	20.411	20.596	1.5237					11	5	3	0	0	0	1.0357	1	7907	7907		1.4551	0.67859	1	298940			10282	3264	5022	5045	12574	12574					0.12413241150011345
IAQELLPLN	9	Unmodified	_IAQELLPLN_					0	0	0			REV__ENSG00000257949|ENST00000397640|TEN1	REV__ENSG00000257949|ENST00000397640|TEN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7975036501884	2	505.797675	1009.5808	2.652	0.0013414	-0.1683	-8.5127E-05	2.4837	0.0012563	505.79761214439736	60.973	0.30649	62.938	62.76	63.067	1.9653					16	9	2	0	0	0	0.27148	1	25619	25619		26.884	0	1	728080	+		10283	11978	5023	5046	12575	12575					0.0763891362009872
IAQELLPLN	9	Unmodified	_IAQELLPLN_					0	0	0			REV__ENSG00000257949|ENST00000397640|TEN1	REV__ENSG00000257949|ENST00000397640|TEN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	505.797675	1009.5808	3.2389	0.0016382	1.119	0.00056599	4.3579	0.0022042	505.7984732412623	61.475	0.33648	62.892	62.683	63.02	1.4177	-0.022678	0.00049776	NaN	26.884	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	679700	+		10284	11978	5023	5046							0.0763891362009872
IAQELLPLN	9	Unmodified	_IAQELLPLN_					0	0	0			REV__ENSG00000257949|ENST00000397640|TEN1	REV__ENSG00000257949|ENST00000397640|TEN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	505.797675	1009.5808	2.652	0.0013414	-0.1683	-8.5127E-05	2.4837	0.0012563	505.79761214439736	60.973	0.30649	62.938	62.76	63.067	1.9653	0.022678	-0.00080448	NaN	26.884	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	728080	+		10285	11978	5023	5046							0.0763891362009872
IAQKQRKLT	9	Unmodified	_IAQKQRKLT_					0	0	0			REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	REV__NGRN|p.S114Qfs*3|1|0.04|ENSG00000182768|chr15:90271250-90271251|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2541076540947	3	362.564502	1084.67168	1.5814	0.00057336	-1.9054	-0.00069083	-0.32401	-0.00011748	362.56371710109653	78.722	0.34476	79.989	79.817	80.161	1.2668					17	10	2	0	0	0	0.11938	1	33075	33075		1.1933	0	1	328310	+		10286	11364	5024	5047	12576	12576					0.1327280238822368
IAQLRFPVP	9	Unmodified	_IAQLRFPVP_					0	0	0		ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5472900271416	3	347.54656	1039.61785	1.4801	0.0005144	-0.45321	-0.00015751	1.0269	0.00035689	347.5464481081264	40.12	0.76942	41.982	41.402	42.171	1.8624					49	24	4	0	0	0	0.77025	1	16809	16809		4.5289	0.58447	1	4356500			10287	2025	5025	5048	12577	12577					0.09962629956521596
IAQLVRSMW	9	Unmodified	_IAQLVRSMW_					0	0	0			REV__nc|ENSG00000160305|Q14689-5|DIP2A;REV__ENSG00000066084|ENST00000301180|DIP2B	REV__nc|ENSG00000160305|Q14689-5|DIP2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.3074828982353	2	552.305144	1102.59573	2.0192	0.0011152	2.7046	0.0014938	4.7238	0.002609	552.3062669554167	89.067	0.35111	89.067	88.795	89.146	0					19	10	2	0	0	0	0.84195	1	37236	37236		1.6526	0.17072	1	1596100	+		10288	10599;8681	5026	5049	12578	12578					0.04854082216434108
IAQLVRSMW	9	Unmodified	_IAQLVRSMW_					0	0	0			REV__nc|ENSG00000160305|Q14689-5|DIP2A;REV__ENSG00000066084|ENST00000301180|DIP2B	REV__nc|ENSG00000160305|Q14689-5|DIP2A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	552.305144	1102.59573	2.0192	0.0011152	2.7046	0.0014938	4.7238	0.002609	552.3062669554167	89.067	0.35111	89.067	88.795	89.146	0	-0.16937	-0.00027056	NaN	1.6526	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1596100	+		10289	10599;8681	5026	5049							0.04854082216434108
IAQLVRSMW	9	Unmodified	_IAQLVRSMW_					0	0	0			REV__nc|ENSG00000160305|Q14689-5|DIP2A;REV__ENSG00000066084|ENST00000301180|DIP2B	REV__nc|ENSG00000160305|Q14689-5|DIP2A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.305144	1102.59573	2.5785	0.0014241	3.1791	0.0017558	5.7575	0.0031799	552.3060421474995	88.925	0.38835	89.149	88.938	89.327	0.22359	-0.087424	0.00025349	NaN	1.6526	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1666200	+		10290	10599;8681	5026	5049							0.04854082216434108
IAQLYQDL	8	Unmodified	_IAQLYQDL_					0	0	0			REV__ENSG00000181215|ENST00000531445|C4orf50	REV__ENSG00000181215|ENST00000531445|C4orf50	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2631408572197	2	482.260925	962.507297	4.059	0.0019575	-0.49496	-0.0002387	3.5641	0.0017188	482.26080265487536	95.783	0.24536	96.204	96.099	96.344	0.4212					14	7	3	0	0	0	0.88055	1	40313	40313		8.5933	0	1	727680	+		10291	11318	5027	5050	12579	12579					0.02454365177618456
IAQNLDFVNL	10	Unmodified	_IAQNLDFVNL_					0	0	0		nc|ENSG00000133063|Q13231-2|CHIT1;nc|ENSG00000133063|Q13231-3|CHIT1;nc|ENSG00000133063|Q13231-4|CHIT1;ENSG00000133063|ENST00000367229|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8155395388603	2	573.811313	1145.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.773	1	62.192	61.692	62.692	1.4196								0	0	0	0.26427	1	25489	25489		34.932	2.1464	1				10292	2558	5028	5051	12580	12580					0.04109397160482331
IAQNLDFVNL	10	Unmodified	_IAQNLDFVNL_					0	0	0		nc|ENSG00000133063|Q13231-2|CHIT1;nc|ENSG00000133063|Q13231-3|CHIT1;nc|ENSG00000133063|Q13231-4|CHIT1;ENSG00000133063|ENST00000367229|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8135864138603	2	573.811313	1145.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.242	1	62.207	61.707	62.707	1.9653								0	0	0	0.12251	1	25279	25279		41.956	2.0059	1				10293	2558	5028	5051	12581	12581					0.04109397160482331
IAQNLDFVNL	10	Unmodified	_IAQNLDFVNL_					0	0	0		nc|ENSG00000133063|Q13231-2|CHIT1;nc|ENSG00000133063|Q13231-3|CHIT1;nc|ENSG00000133063|Q13231-4|CHIT1;ENSG00000133063|ENST00000367229|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8151122927666	2	573.811313	1145.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.355	1	62.321	61.821	62.821	1.9653								0	0	0	0.023935	1	25326	25326		51.63	7.7715	1				10294	2558	5028	5051	12582	12582					0.04109397160482331
IAREIGFPV	9	Unmodified	_IAREIGFPV_					0	0	0		tr|A0A7D6ZJ05|A0A7D6ZJ05_9CLOTBiotincarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09300PE=4SV=1	tr|A0A7D6ZJ05|A0A7D6ZJ05_9CLOTBiotincarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09300PE=4SV=1	tr|A0A7D6ZJ05|A0A7D6ZJ05_9CLOTBiotincarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09300PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.1963378787041	2	501.292559	1000.57057	2.3833	0.0011947	-2.7903	-0.0013987	-0.40696	-0.000204	501.29106682581175	65.826	0.72903	67.225	66.817	67.546	1.3989					47	23	3	0	0	0	0.094078	1	27687	27687		18.135	5.6034	1	1323900			10295	17105	5029	5052	12583	12583					0.07030350685533904
IARKKKISKKY	11	Unmodified	_IARKKKISKKY_					0	0	0		tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.4779540896416	4	341.479049	1361.88709	-1.9776	-0.0006753	-0.75146	-0.00025661	-2.729	-0.00093191	341.4787811110591	29.292	1.0151	29.292	28.993	30.008	0					102	32	5	0	0	0	1.039	2	12197	12197;12235		0.45452	0	1	29706000			10296	17042	5030	5053	12584;12585	12584					0.22062143853031557
IARRGLWAL	9	Unmodified	_IARRGLWAL_					0	0	0		ENST00000269142.9_1_18:23806426-23806600:+|nuORF	ENST00000269142.9_1_18:23806426-23806600:+|nuORF	ENST00000269142.9_1_18:23806426-23806600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3272582888603	2	528.327268	1054.63998	0.66031	0.00034886	-1.173	-0.00061975	-0.51274	-0.00027089	528.3265640705935	51.5	0.3392	53.475	53.311	53.65	1.9753					24	10	3	0	0	0	0.20838	1	21549	21549		32.117	3.6301	1	8318700			10297	5667	5031	5054	12586	12586					0.11484854424929836
IARRSFQR	8	Unmodified	_IARRSFQR_					0	0	0		ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	ENSG00000065457|ENST00000564657|ADAT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6265136599541	2	517.304324	1032.5941	1.6642	0.00086088	3.6143	0.0018697	5.2784	0.0027306	517.3063182539182	50.267	0.30209	52.244	52.007	52.31	1.9772					17	9	3	0	0	0	2.3239	1	20957	20957		18.135	0	1	3557600			10298	788	5032	5055	12587	12587					0.07910209242709243
IARRTFHI	8	Unmodified	_IARRTFHI_					0	0	0			REV__nc|ENSG00000120798|P13056-3|NR2C1	REV__nc|ENSG00000120798|P13056-3|NR2C1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3046447634697	2	507.303793	1012.59303	1.9796	0.0010043	-0.95096	-0.00048242	1.0286	0.00052183	507.3032225769791	42.094	0.33918	42.094	41.918	42.257	0					30	10	4	0	0	0	0.87935	1	17685	17685		9.3474	0	1	5605500	+		10299	14417	5033	5056	12588	12588					0.08723994873787433
IARTFVTRR	9	Unmodified	_IARTFVTRR_					0	0	0			REV__ZSWIM5|p.L701Hfs*6|1|0.15|ENSG00000162415|chr1:45036092-45036093|-/AAGGTAT|frameshift_variant	REV__ZSWIM5|p.L701Hfs*6|1|0.15|ENSG00000162415|chr1:45036092-45036093|-/AAGGTAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3427612185478	2	560.340907	1118.66726	2.53	0.0014177	1.424	0.00079791	3.954	0.0022156	560.3415504621547	88.227	0.5611	88.461	88.228	88.789	0.23471					68	17	5	0	0	0	0.84963	1	36936	36936		0.6015	0	1	57751000	+		10300	10645	5034	5057	12589	12589					0.11267337965318802
IASETHVVLIL	11	Unmodified	_IASETHVVLIL_					0	0	0		nc|ENSG00000089250|P29475-4|NOS1;nc|ENSG00000089250|P29475-2|NOS1;ENSG00000089250|ENST00000317775|NOS1;nc|ENSG00000089250|P29475-5|NOS1	nc|ENSG00000089250|P29475-4|NOS1	nc|ENSG00000089250|P29475-4|NOS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	598.3076660037041	2	597.858264	1193.70197	2.7559	0.0016476	-4.3766	-0.0026166	-1.6207	-0.00096897	597.8569067689729	72.329	0.52596	74.139	73.89	74.416	1.8101					28	16	2	0	0	0	0.14606	1	30419	30419		5.7319	0.50118	1	949880			10301	1123	5035	5058	12590	12590					0.11287116262769814
IASEYCDVES	10	Unmodified	_IASEYCDVES_					0	0	0			REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.7344238162041	2	558.231704	1114.44886	2.1466	0.0011983	0.56877	0.00031751	2.7154	0.0015158	558.2319796612143	59.015	0.26554	60.435	60.29	60.556	1.4196					15	8	2	0	0	0	0.87699	1	24763	24763		3.9444	0.3479	1	1621000	+		10302	15427	5036	5059	12591	12591					-0.10379104249841475
IASEYCDVES	10	Unmodified	_IASEYCDVES_					0	0	0			REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	558.231704	1114.44886	2.1466	0.0011983	0.56877	0.00031751	2.7154	0.0015158	558.2319796612143	59.015	0.26554	60.435	60.29	60.556	1.4196	-0.077002	-0.00032682	NaN	3.9444	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1621000	+		10303	15427	5036	5059							-0.10379104249841475
IASEYCDVES	10	Unmodified	_IASEYCDVES_					0	0	0			REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	REV__tr|A0A7D6VRV5|A0A7D6VRV5_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07180PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	558.231704	1114.44886	1.8811	0.0010501	1.3031	0.00072742	3.1841	0.0017775	558.2321101641401	58.62	0.20402	60.589	60.429	60.633	1.969	0.077002	0.00049301	NaN	3.9444	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1360500	+		10304	15427	5036	5059							-0.10379104249841475
IASFSLTHL	9	Unmodified	_IASFSLTHL_					0	0	0		ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7775756716728	2	494.776742	987.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.467	1	46.467	45.967	46.967	0								0	0	0	0.40883	1	19427	19427		7.9102	0	1				10305	3794	5037	5060	12592	12592					0.0446635793156247
IASLSIYDNG	10	Unmodified	_IASLSIYDNG_					0	0	0		tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.5128661990166	3	351.513473	1051.51859	-0.47912	-0.00016842	-2.8272	-0.00099381	-3.3063	-0.0011622	351.5127750651938	30.583	0.24751	31.865	31.718	31.965	1.2825					19	7	3	0	0	0	0.87271	1	12851	12851		4.4062	1.9077	1	842520			10306	16819	5038	5061	12593	12593					-0.005108575189296971
IASLSIYDNG	10	Unmodified	_IASLSIYDNG_					0	0	0		tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	tr|A0A7D6VR56|A0A7D6VR56_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.5132934451103	3	351.513473	1051.51859	0.37955	0.00013342	-4.0481	-0.0014229	-3.6685	-0.0012895	351.51280457972507	30.074	0.21611	31.889	31.738	31.954	1.8151					11	6	3	0	0	0	0.82788	1	12626	12626		9.2438	4.7149	1	641970			10307	16819	5038	5061	12594	12594					-0.005108575189296971
IASSLLNFAL	10	Unmodified	_IASSLLNFAL_					0	0	0			REV__tr|A0A7D6ZN70|A0A7D6ZN70_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14945PE=4SV=1	REV__tr|A0A7D6ZN70|A0A7D6ZN70_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14945PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.2077819705009	3	350.206092	1047.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.347	1	31.629	31.129	32.129	1.2825								0	0	0	0.66035	1	12735	12735		3.8763	1.3778	1		+		10308	15678	5039	5062	12595	12595					0.07455200137133033
IASYKANA	8	Unmodified	_IASYKANA_					0	0	0		tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	419.2271606326103	2	419.226885	836.439217	0.64899	0.00027207	0.36433	0.00015274	1.0133	0.00042481	419.22708755023353	19.589	0.28595	20.647	20.476	20.762	1.0585					21	8	3	0	0	0	0.37084	1	8139	8139		60.39	5.616	1	4036800			10309	16169	5040	5063	12596	12596					0.014455403176043546
IASYKANA	8	Unmodified	_IASYKANA_					0	0	0		tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	tr|A0A553SHU5|A0A553SHU5_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	419.2277709841728	2	419.226885	836.439217	0.35564	0.00014909	0.93856	0.00039347	1.2942	0.00054256	419.22729416702805	19.088	0.2824	20.611	20.471	20.753	1.5237					20	8	3	0	0	0	0.37084	2	7926	7926;7964		60.39	5.616	1	3902200			10310	16169	5040	5063	12597;12598	12597					0.014455403176043546
IATEIILEI	9	Unmodified	_IATEIILEI_					0	0	0		ENST00000526194.5_1_1:21560049-21616919:-|nuORF;ECE1|p.T697Pfs*6|1|0.03|ENSG00000117298|chr1:21221793-21221794|GT/-|frameshift_variant;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;ENSG00000117298|ENST00000374893|ECE1;nc|ENSG00000117298|P42892-2|ECE1	ENST00000526194.5_1_1:21560049-21616919:-|nuORF	ENST00000526194.5_1_1:21560049-21616919:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8100463747978	2	507.807708	1013.60086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.68	1	83.892	83.392	84.392	1.2125								0	0	0	0.049731	1	34704	34704		60.39	18.295	1				10311	438	5041	5064	12599	12599					0.09460664560037912
IATILSKIS	9	Unmodified	_IATILSKIS_					0	0	0		ENST00000488174.5_1_X:70766398-70766500:+|nuORF	ENST00000488174.5_1_X:70766398-70766500:+|nuORF	ENST00000488174.5_1_X:70766398-70766500:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3030273318291	2	473.302593	944.590633	1.6889	0.00079936	2.8853	0.0013656	4.5742	0.002165	473.30285205342085	50.774	0.42413	52.168	51.862	52.287	1.3938					31	13	4	0	0	0	0.44512	1	21292	21292		18.146	0	1	3216800			10312	6885	5042	5065	12600	12600					0.1161210162547377
IATLRYRV	8	Unmodified	_IATLRYRV_					0	0	0			REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D	REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3059570193291	2	496.306001	990.597449	2.5564	0.0012688	-2.2713	-0.0011273	0.28513	0.00014151	496.304918501009	66.334	0.9093	66.659	66.432	67.341	0.32449					45	28	3	0	0	0	0.88409	1	27718	27718		6.3541	1.1234	1	1712200	+		10313	10034	5043	5066	12601	12601					0.10177459296698999
IATPHITML	9	Unmodified	_IATPHITML_					0	0	0		L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.7834655642509	2	498.78097	995.547388	1.6549	0.00082543	-0.68804	-0.00034318	0.96686	0.00048225	498.7813439446693	43.19	0.29766	44.544	44.408	44.705	1.3536					12	9	2	0	0	0	0.09539	1	18112	18112		50.855	9.0154	1	1124400			10314	7738	5044	5067	12602	12602					0.049435885765319654
IATPHITML	9	Unmodified	_IATPHITML_					0	0	0		L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|18|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7821533083916	2	498.78097	995.547388	1.6357	0.00081583	1.2203	0.00060866	2.8559	0.0014245	498.78128837882304	42.603	0.24831	44.524	44.353	44.601	1.9211					14	7	2	0	0	0	0.11478	1	17852	17852		44.407	8.3628	1	833040			10315	7738	5044	5067	12603	12603					0.049435885765319654
IATSIALLT	9	Unmodified	_IATSIALLT_					0	0	0			REV__tr|A0A7D7A3L8|A0A7D7A3L8_9CLOTIsoleucine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=ileSPE=3SV=1	REV__tr|A0A7D7A3L8|A0A7D7A3L8_9CLOTIsoleucine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=ileSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5557739138603	1	902.55571	901.548434	2.789	0.0025172	-0.50607	-0.00045675	2.2829	0.0020605	902.5554552326445	64.933	0.43932	66.332	66.101	66.54	1.3989					28	13	3	0	0	0	0.051699	1	27194	27194		67.344	0	1	5162700	+		10316	15864	5045	5068	12604	12604					0.09372126217078858
IATTLFFW	8	Unmodified	_IATTLFFW_					0	0	0			REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.7693054080009	2	499.770929	997.527304	1.5499	0.0007746	-2.883	-0.0014408	-1.3331	-0.00066623	499.7693548262144	40.282	0.22665	40.282	40.169	40.396	0					9	6	2	0	0	0	0.88409	1	16901	16901		6.3541	1.1234	1	590350	+		10317	15543	5046	5069	12605	12605					0.028441609082278774
IATVVLAIHSI	11	Unmodified	_IATVVLAIHSI_					0	0	0			REV__ENST00000498999.2_1_5:134262808-134262898:-|nuORF	REV__ENST00000498999.2_1_5:134262808-134262898:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.5725280642509	3	379.572775	1135.69649	2.5131	0.00095392	-2.9017	-0.0011014	-0.38853	-0.00014747	379.5717506133168	88.258	0.49749	88.493	88.259	88.756	0.23471					50	15	5	0	0	0	1.0118	1	37046	37046		3.0723	0.22898	1	20485000	+		10318	13499	5047	5070	12606	12606					0.1340743747093711
IATVVLAIHSI	11	Unmodified	_IATVVLAIHSI_					0	0	0			REV__ENST00000498999.2_1_5:134262808-134262898:-|nuORF	REV__ENST00000498999.2_1_5:134262808-134262898:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5726806521416	3	379.572775	1135.69649	4.3991	0.0016698	-3.1123	-0.0011813	1.2868	0.00048843	379.5715094816345	87.254	0.52708	88.749	88.456	88.983	1.4953					30	16	2	0	0	0	0.97905	1	36753	36753		5.0475	2.3123	1	7926700	+		10319	13499	5047	5070	12607	12607					0.1340743747093711
IAVERVISV	9	Unmodified	_IAVERVISV_					0	0	0		ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.8140136599541	2	493.305667	984.596781	1.59	0.00078436	-1.9073	-0.00094087	-0.31727	-0.00015651	493.304535002902	57.291	0.43835	57.291	57.041	57.479	0					52	17	4	0	0	0	0.053939	1	23842	23842		66.457	4.8548	1	25993000			10320	5381	5048	5071	12608	12608					0.10386619857013102
IAVERVISV	9	Unmodified	_IAVERVISV_					0	0	0		ENSG00000250423|ENST00000691062|KIAA1210;nc|ENSG00000250423|Q9ULL0|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	ENSG00000250423|ENST00000691062|KIAA1210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3062011599541	2	493.305667	984.596781	0.19036	9.3907E-05	-0.58494	-0.00028855	-0.39457	-0.00019465	493.30527863568426	55.219	0.38301	57.187	56.93	57.313	1.9684					51	17	4	0	0	0	0.036104	2	23077	23077;23204		79.596	14.123	1	58579000			10321	5381	5048	5071	12609;12610	12609					0.10386619857013102
IAVFLPIVV	9	Unmodified	_IAVFLPIVV_					0	0	0		ENST00000412573.1_1_7:89792322-89794045:+|nuORF;ENSG00000164647|ENST00000297205|STEAP1	ENST00000412573.1_1_7:89792322-89794045:+|nuORF	ENST00000412573.1_1_7:89792322-89794045:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2167846560478	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.84	1	104.01	103.51	104.51	0.16055								0	0	0	0.42693	1	43873	43873		0.26902	0	1				10322	3788	5049	5072	12611	12611					0.14026183873147602
IAVGGYFLGGV	11	Unmodified	_IAVGGYFLGGV_					0	0	0		ENST00000515554.1_1_5:133861384-133861483:+|nuORF	ENST00000515554.1_1_5:133861384-133861483:+|nuORF	ENST00000515554.1_1_5:133861384-133861483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7969238162041	2	526.792392	1051.57023	2.2252	0.0011722	2.5839	0.0013612	4.8091	0.0025334	526.794746740143	43.745	0.37747	45.689	45.485	45.862	1.9438					16	10	2	0	0	0	0.57967	1	18308	18308		21.747	0	1	1154700			10323	7055	5050	5073	12612	12612					0.046509309656585174
IAVHLITVSIA	11	Unmodified	_IAVHLITVSIA_					0	0	0			REV__ENSG00000203756|ENST00000368143|TMEM244	REV__ENSG00000203756|ENST00000368143|TMEM244	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	380.2284728884697	3	379.572775	1135.69649	1.6296	0.00061853	-1.6459	-0.00062474	-0.016354	-6.2076E-06	379.57147114555113	79.133	0.1559	79.434	79.34	79.496	0.30046					6	4	2	0	0	0	0.14606	1	33092	33092		0.50596	0.23694	1	167980	+		10324	11765	5051	5074	12613	12613					0.1340743747093711
IAVHLITVSIA	11	Unmodified	_IAVHLITVSIA_					0	0	0			REV__ENSG00000203756|ENST00000368143|TMEM244	REV__ENSG00000203756|ENST00000368143|TMEM244	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	379.572775	1135.69649	1.6763	0.00063626	-3.4417	-0.0013064	-1.7654	-0.0006701	379.57139342546265	77.907	0.92838	79.188	78.507	79.435	1.2809	-0.091938	-9.1815E-05	NaN	0.50596	55	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1756700	+		10325	11765	5051	5074							0.1340743747093711
IAVHLITVSIA	11	Unmodified	_IAVHLITVSIA_					0	0	0			REV__ENSG00000203756|ENST00000368143|TMEM244	REV__ENSG00000203756|ENST00000368143|TMEM244	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	379.572775	1135.69649	1.021	0.00038753	-3.4031	-0.0012917	-2.3822	-0.00090421	379.5711961313938	77.468	0.80406	79.219	78.818	79.622	1.7514	-0.061352	-4.7955E-05	NaN	0.50596	36	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1196200	+		10326	11765	5051	5074							0.1340743747093711
IAVKPFTEL	9	Unmodified	_IAVKPFTEL_					0	0	0		tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3050720095634	2	509.302593	1016.59063	2.5106	0.0012787	4.4606	0.0022718	6.9713	0.0035505	509.304469937121	76.061	0.45804	76.383	76.144	76.602	0.32163					26	14	3	0	0	0	0.83213	1	31845	31845		2.0598	0	1	1724100			10327	16186	5052	5075	12614	12614					0.08300101625468415
IAVNAVLTV	9	Unmodified	_IAVNAVLTV_					0	0	0		ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5;ENSG00000150753|ENST00000280326|CCT5	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	899.5567504763603	1	899.556044	898.548768	2.8667	0.0025788	-0.12398	-0.00011153	2.7428	0.0024673	899.5558530311823	61.081	0.402	62.501	62.314	62.716	1.4196					26	12	3	0	0	0	0.069258	1	25630	25630		60.39	0	1	2789600			10328	3271	5053	5076	12615	12615					0.09543545936946884
IAVNAVLTV	9	Unmodified	_IAVNAVLTV_					0	0	0		ENST00000423695.6_1_5:10250480-10261980:+|nuORF;nc|ENSG00000150753|P48643-2|CCT5;ENSG00000150753|ENST00000280326|CCT5	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	ENST00000423695.6_1_5:10250480-10261980:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2829467654228	2	450.28166	898.548768	3.562	0.0016039	-0.33883	-0.00015257	3.2232	0.0014513	450.2815280117947	60.566	0.37378	62.531	62.356	62.729	1.9653					20	11	2	0	0	0	0.03795	1	25403	25403		77.984	7.2688	1	3795000			10329	3271	5053	5076	12616	12616					0.09543545936946884
IAVQHQIPL	9	Unmodified	_IAVQHQIPL_					0	0	0		tr|A0A553STP3|A0A553STP3_NIACIDUF111familyproteinOS=NialliacirculansOX=1397GN=CEQ21_05520PE=4SV=1	tr|A0A553STP3|A0A553STP3_NIACIDUF111familyproteinOS=NialliacirculansOX=1397GN=CEQ21_05520PE=4SV=1	tr|A0A553STP3|A0A553STP3_NIACIDUF111familyproteinOS=NialliacirculansOX=1397GN=CEQ21_05520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8055602908134	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.707	1	68.096	67.596	68.596	1.3888								0	0	0	0.40188	1	27984	27984		8.5933	0	1				10330	16663	5054	5077	12617	12617					0.08902039576844345
IAVSLGLGLFS	11	Unmodified	_IAVSLGLGLFS_					0	0	0			REV__ENSG00000173214|ENST00000671876|MFSD4B	REV__ENSG00000173214|ENST00000671876|MFSD4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8226196169853	2	538.82115	1075.62775	1.8439	0.00099352	2.1985	0.0011846	4.0423	0.0021781	538.8225001812591	49.423	0.84114	51.4	50.947	51.788	1.9772					52	26	3	0	0	0	0.11083	1	20728	20728		53.833	6.2384	1	14615000	+		10331	11088	5055	5078	12618	12618					0.0929577317122039
IAVTYFITL	9	Unmodified	_IAVTYFITL_					0	0	0		ENSG00000164638|ENST00000396872|SLC29A4;nc|ENSG00000164638|Q7RTT9-2|SLC29A4	ENSG00000164638|ENST00000396872|SLC29A4	ENSG00000164638|ENST00000396872|SLC29A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.8074218630791	2	520.804968	1039.59538	2.9417	0.001532	-0.78377	-0.00040819	2.1579	0.0011239	520.8043690398749	65.395	0.33975	66.794	66.601	66.941	1.3989					13	9	2	0	0	0	0.46905	1	27454	27454		16.942	0.79319	1	887110			10332	3786	5056	5079	12619	12619					0.07716985768252016
IAVTYFITL	9	Unmodified	_IAVTYFITL_					0	0	0		ENSG00000164638|ENST00000396872|SLC29A4;nc|ENSG00000164638|Q7RTT9-2|SLC29A4	ENSG00000164638|ENST00000396872|SLC29A4	ENSG00000164638|ENST00000396872|SLC29A4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	520.804968	1039.59538	1.8405	0.00095853	2.3195	0.001208	4.1599	0.0021665	520.8056248635024	64.983	0.24852	66.891	66.72	66.969	1.9085	0.048929	0.0014388	NaN	16.942	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	784510			10333	3786	5056	5079							0.07716985768252016
ICKIWEEKEEP	11	Unmodified	_ICKIWEEKEEP_					0	0	0			REV__nc|ENSG00000108669|Q15438-3|CYTH1	REV__nc|ENSG00000108669|Q15438-3|CYTH1	MSMS	GG20161007_CRH_Patient100_W632_01	3	702.3550292849541	2	702.347403	1402.68025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.25	1	92.231	91.731	92.731	0.98157								0	0	0	0.63775	1	38433	38433		2.9952	0	1		+		10334	9261	5057	5080	12620	12620					-0.004980565481218946
ICLYKISKM	9	Unmodified	_ICLYKISKM_					0	0	0		ENSG00000077585|ENST00000366592|GPR137B	ENSG00000077585|ENST00000366592|GPR137B	ENSG00000077585|ENST00000366592|GPR137B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	366.0763427615166	3	366.873179	1097.59771	0.46471	0.00017049	3.0933	0.0011349	3.558	0.0013053	367.2094247333133	29.865	0.42965	31.68	31.554	31.984	1.8151					16	13	2	0	0	0	0.11946	1	12609	12609		0.26902	0.12913	1	305690			10335	965	5058	5081	12621	12621					0.05281374910055092
ICTAPGVG	8	Unmodified	_ICTAPGVG_					0	0	0		ENST00000457866.6_1_6:135818371-135818824:-|nuORF;ENST00000367800.8_1_6:135811867-135818824:-|nuORF	ENST00000457866.6_1_6:135818371-135818824:-|nuORF	ENST00000457866.6_1_6:135818371-135818824:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.7128784060478	2	359.183632	716.352711	-0.61334	-0.0002203	0.57795	0.00020759	-0.035395	-1.2713E-05	359.1838053082156	60.13	0.37252	60.13	59.944	60.317	0					24	12	2	0	0	0	2.3239	1	25091	25091		0	0	1	3607200			10336	6072	5059	5082	12622	12622					-0.016811625085892956
ICYNFMPV	8	Unmodified	_ICYNFMPV_					0	0	0		tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1;tr|A0A553SHY3|A0A553SHY3_NIACIMannonatedehydrataseOS=NialliacirculansOX=1397GN=uxuAPE=3SV=1;tr|A0A7D6VV18|A0A7D6VV18_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2308532595634	2	493.727349	985.440145	1.8311	0.00090406	3.512	0.001734	5.3431	0.002638	493.7295453057859	65.791	0.45327	67.7	67.529	67.982	1.9085					18	14	2	0	0	0	2.3239	1	27685	27685		11.114	0	1	543490			10337	16768	5060	5083	12623	12623					-0.05315704629344964
IDALNENK	8	Unmodified	_IDALNENK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.7409240603447	2	458.740357	915.46616	0.68301	0.00031333	-0.074104	-3.3995E-05	0.60891	0.00027933	458.7405941647745	13.718	1.2351	13.718	13.177	14.412	0					84	39	4	0	0	0	0.065974	1	5690	5690		99.799	17.909	1	8189200		+	10338	339	5061	5084	12624	12624					0.005046041381433497
IDALNENK	8	Unmodified	_IDALNENK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1724426150322	2	458.740357	915.46616	0.86559	0.00039708	-0.73754	-0.00033834	0.12805	5.8742E-05	458.74040733833516	13.726	0.78032	13.825	13.28	14.061	0.099441					39	24	3	0	0	0	2.3239	1	5720	5720		21.747	0	1	2390700		+	10339	339	5061	5084	12625	12625					0.005046041381433497
IDALNENK	8	Unmodified	_IDALNENK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1725952029228	2	458.740357	915.46616	0.38606	0.0001771	-0.73536	-0.00033734	-0.34929	-0.00016023	458.7404090012319	13.129	0.3951	13.957	13.771	14.166	0.82789					25	15	3	0	0	0	2.3239	1	5433	5433		10.824	0	1	845000		+	10340	339	5061	5084	12626	12626					0.005046041381433497
IDDRGKYPQI	10	Unmodified	_IDDRGKYPQI_					0	0	0			REV__nc|ENSG00000185090|Q5VSG8-3|MANEAL	REV__nc|ENSG00000185090|Q5VSG8-3|MANEAL	MSMS	GG20161007_CRH_Patient100_A02_02	2	602.8194457888603	2	602.81967	1203.62479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.247	1	58.57	58.07	59.07	0.32298								0	0	0	0.65462	1	24414	24414		10.074	0	1		+		10341	11447	5062	5085	12627	12627					0.031118980464270862
IDFHRQDFK	9	Unmodified	_IDFHRQDFK_					0	0	0		tr|A0A7D7A214|A0A7D7A214_9CLOTClassISAM-dependentRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14610PE=4SV=1	tr|A0A7D7A214|A0A7D7A214_9CLOTClassISAM-dependentRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14610PE=4SV=1	tr|A0A7D7A214|A0A7D7A214_9CLOTClassISAM-dependentRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14610PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1801025271416	3	402.540245	1204.59891	0.37136	0.00014949	-0.2007	-8.079E-05	0.17066	6.8696E-05	402.5403011816708	13.913	0.37272	14.013	13.873	14.246	0.09944					19	11	2	0	0	0	0.11901	1	5764	5764		2.7352	0	1	880730			10342	17251	5063	5086	12628	12628					0.0047904859479785955
IDGAVISG	8	Unmodified	_IDGAVISG_					0	0	0		nc|ENSG00000197565|Q14031|COL4A6;ENSG00000197565|ENST00000334504|COL4A6	nc|ENSG00000197565|Q14031|COL4A6	nc|ENSG00000197565|Q14031|COL4A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.2003356814384	2	366.200336	730.386119	-0.90251	-0.0003305	1.3341	0.00048854	0.43158	0.00015804	366.20059667575464	15.181	0.28064	15.95	15.77	16.05	0.76937					12	8	2	0	0	0	0.82039	1	6315	6315		19.439	0	1	394880			10343	7966	5064	5087	12629	12629					0.010141625349660899
IDGAVISG	8	Unmodified	_IDGAVISG_					0	0	0		nc|ENSG00000197565|Q14031|COL4A6;ENSG00000197565|ENST00000334504|COL4A6	nc|ENSG00000197565|Q14031|COL4A6	nc|ENSG00000197565|Q14031|COL4A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.2000915408134	2	366.200336	730.386119	-0.13719	-5.024E-05	0.19585	7.1721E-05	0.058659	2.1481E-05	366.2003655689838	15.109	0.21276	16.006	15.869	16.082	0.89664					10	6	2	0	0	0	0.76103	1	6262	6262		24.674	0	1	589640			10344	7966	5064	5087	12630	12630					0.010141625349660899
IDGDHILII	9	Unmodified	_IDGDHILII_					0	0	0			REV__tr|A0A7D6VPR0|A0A7D6VPR0_9CLOTHistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19790PE=4SV=1	REV__tr|A0A7D6VPR0|A0A7D6VPR0_9CLOTHistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19790PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7909118533134	2	504.78985	1007.56515	1.3036	0.00065803	0.90462	0.00045664	2.2082	0.0011147	504.7903377623838	52.171	0.40548	53.568	53.368	53.774	1.3966					30	12	3	0	0	0	0.087207	1	21888	21888		53.576	2.7205	1	5122200	+		10345	15362	5065	5088	12631	12631					0.06166627103061728
IDGDHILII	9	Unmodified	_IDGDHILII_					0	0	0			REV__tr|A0A7D6VPR0|A0A7D6VPR0_9CLOTHistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19790PE=4SV=1	REV__tr|A0A7D6VPR0|A0A7D6VPR0_9CLOTHistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19790PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7899963259697	2	504.78985	1007.56515	0.50374	0.00025428	0.56437	0.00028489	1.0681	0.00053917	504.79005089419445	51.502	0.46144	53.478	53.311	53.772	1.9753					30	14	3	0	0	0	0.069258	2	21613	21562;21613		60.39	6.814	1	5745000	+		10346	15362	5065	5088	12632;12633	12633					0.06166627103061728
IDGGSPIINYV	11	Unmodified	_IDGGSPIINYV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3047973513603	2	574.303321	1146.59209	1.133	0.00065071	-0.1753	-0.00010067	0.95775	0.00055004	574.3043068133304	53.702	0.36629	55.102	54.92	55.286	1.4005					58	14	5	0	0	0	0.58697	1	22477	22477		21.537	3.3906	1	40455000			10347	3425;7900	5066	5089	12634	12634					0.024656909235773128
IDGPQVCDK	9	Unmodified	_IDGPQVCDK_					0	0	0		ENST00000465215.1_1_3:101659750-101679293:+|nuORF	ENST00000465215.1_1_3:101659750-101679293:+|nuORF	ENST00000465215.1_1_3:101659750-101679293:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	325.4906799197197	3	325.491904	973.453881	-3.1622	-0.0010293	-0.4442	-0.00014458	-3.6064	-0.0011738	325.49176393298416	15.779	0.52664	15.779	15.56	16.087	0					50	16	4	0	0	0	0.42305	1	6536	6536		13.615	0	1	10332000			10348	6697	5067	5090	12635	12635					-0.033907555965583924
IDIDIDPPSKP	11	Unmodified	_IDIDIDPPSKP_					0	0	0			REV__ENSG00000165895|ENST00000298815|ARHGAP42	REV__ENSG00000165895|ENST00000298815|ARHGAP42	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.3242065310478	2	605.321711	1208.62887	4.6644	0.0028235	0.44685	0.00027049	5.1113	0.003094	605.3219403049853	86.945	0.99089	88.44	88.151	89.142	1.4953					62	31	3	0	0	0	0.22376	1	36661	36661		38.176	10.547	1	5693700	+		10349	10802	5068	5091	12636	12636					0.03289942749461261
IDIDIDPPSKP	11	Unmodified	_IDIDIDPPSKP_					0	0	0			REV__ENSG00000165895|ENST00000298815|ARHGAP42	REV__ENSG00000165895|ENST00000298815|ARHGAP42	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	605.321711	1208.62887	4.6644	0.0028235	0.44685	0.00027049	5.1113	0.003094	605.3219403049853	86.945	0.99089	88.44	88.151	89.142	1.4953	0.0021159	-0.00041774	NaN	38.176	62	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5693700	+		10350	10802	5068	5091							0.03289942749461261
IDKILEEIKVI	11	Unmodified	_IDKILEEIKVI_					0	0	0		tr|A0A7D6W299|A0A7D6W299_9CLOTMoxRfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05435PE=4SV=1	tr|A0A7D6W299|A0A7D6W299_9CLOTMoxRfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05435PE=4SV=1	tr|A0A7D6W299|A0A7D6W299_9CLOTMoxRfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.9088622927666	2	656.907953	1311.80135	3.2055	0.0021057	-0.99001	-0.00065035	2.2155	0.0014554	656.9071972574906	95.151	0.31767	95.553	95.363	95.681	0.40208					21	13	2	0	0	0	1.0366	1	40069	40069		1.1933	0	1	5397600			10351	17029	5069	5092	12637	12637					0.15792514156828474
IDKQLRRRRCK	11	Unmodified	_IDKQLRRRRCK_					0	0	0			REV__nc|ENSG00000138741|Q13507-3|TRPC3	REV__nc|ENSG00000138741|Q13507-3|TRPC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	491.2887756228447	3	491.296532	1470.86777	1.1801	0.0005798	3.9876	0.0019591	5.1678	0.0025389	491.29782181842967	98.012	0.11679	98.012	97.939	98.056	0					11	4	3	0	0	0	0.14606	1	40957	40957		1.1098	1.0149	1	46619000	+		10352	10076	5070	5093	12638	12638					0.15116864290462217
IDKQTLAQR	9	Unmodified	_IDKQTLAQR_					0	0	0		tr|A0A7D7AAJ9|A0A7D7AAJ9_9CLOTRecombinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23640PE=4SV=1	tr|A0A7D7AAJ9|A0A7D7AAJ9_9CLOTRecombinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23640PE=4SV=1	tr|A0A7D7AAJ9|A0A7D7AAJ9_9CLOTRecombinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2073852419853	3	358.208495	1071.60366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.387	1	18.285	17.785	18.785	0.89794								0	0	0	0.41189	1	7236	7236		7.609	1.4032	1				10353	17316	5071	5094	12639	12639					0.07071932737562747
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8196288943291	2	582.818607	1163.62266	1.6529	0.00096337	0.41444	0.00024154	2.0674	0.0012049	582.8186211561602	68.619	0.50322	68.619	68.421	68.924	0					31	15	3	0	0	0	0.12251	2	28600	28548;28600		41.84	5.7954	1	1685000	+		10354	8767	5072	5095	12640;12641	12641					0.04739469308628941
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8196899294853	2	582.818607	1163.62266	1.5033	0.00087615	0.97108	0.00056596	2.4744	0.0014421	582.818978761974	68.078	0.50328	68.401	68.218	68.721	0.32269					35	15	3	0	0	0	0.12251	3	28514	28463;28514;28570		41.84	7.3375	1	2237000	+		10355	8767	5072	5095	12642;12643;12644	12643					0.04739469308628941
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8200561404228	2	582.818607	1163.62266	1.729	0.0010077	1.3425	0.00078244	3.0715	0.0017902	582.8190101115669	66.958	0.43685	68.347	68.089	68.526	1.3888					37	13	4	0	0	0	0.098163	2	28096	28046;28096		49.933	7.4379	1	4586100	+		10356	8767	5072	5095	12645;12646	12646					0.04739469308628941
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8199951052666	2	582.818607	1163.62266	1.521	0.0008865	1.2943	0.00075435	2.8154	0.0016408	582.8190763044927	66.499	0.40697	68.388	68.15	68.557	1.8889					35	12	4	0	0	0	0.063746	2	27900	27851;27900		62.573	7.3375	1	5611300	+		10357	8767	5072	5095	12647;12648	12648					0.04739469308628941
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	582.818607	1163.62266	1.6529	0.00096337	0.41444	0.00024154	2.0674	0.0012049	582.8186211561602	68.619	0.50322	68.619	68.421	68.924	0	0.18066	-0.00065835	NaN	62.573	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1685000	+		10358	8767	5072	5095							0.04739469308628941
IDKVDWIYI	9	Unmodified	_IDKVDWIYI_					0	0	0			REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	REV__ENST00000589953.1_1_19:36562547-36565998:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	582.818607	1163.62266	1.5033	0.00087615	0.97108	0.00056596	2.4744	0.0014421	582.818978761974	68.078	0.50328	68.401	68.218	68.721	0.32269	-0.0379	-9.5122E-06	NaN	62.573	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2237000	+		10359	8767	5072	5095							0.04739469308628941
IDKYLKKMR	9	Unmodified	_IDKYLKKMR_					0	0	0			REV__tr|A0A553SI58|A0A553SI58_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14255PE=4SV=1	REV__tr|A0A553SI58|A0A553SI58_NIACIResponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_14255PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	598.3140136599541	2	597.855001	1193.69545	2.8708	0.0017163	1.3595	0.00081276	4.2303	0.0025291	597.8559668340692	73.631	2.3111	75.427	74.402	76.713	1.7962					133	73	3	0	0	0	0.11463	1	30578	30578		1.8442	0	1	1933100	+		10360	14838	5073	5096	12649	12649					0.10634899830370159
IDLSSINTI	9	Unmodified	_IDLSSINTI_					0	0	0		tr|A0A7D6ZET8|A0A7D6ZET8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12265PE=4SV=1	tr|A0A7D6ZET8|A0A7D6ZET8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12265PE=4SV=1	tr|A0A7D6ZET8|A0A7D6ZET8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	975.5354492068291	1	975.535703	974.528426	0.67594	0.0006594	0.24311	0.00023716	0.91904	0.00089656	975.5350079110415	55.805	0.29193	57.773	57.641	57.933	1.9684					18	9	3	0	0	0	0.04145	1	23371	23371		74.929	0	1	3533600			10361	17055	5074	5097	12650	12650					0.0401433048649551
IDLYVHISV	9	Unmodified	_IDLYVHISV_					0	0	0		ENST00000299204.4_1_14:104025949-104026138:-|nuORF	ENST00000299204.4_1_14:104025949-104026138:-|nuORF	ENST00000299204.4_1_14:104025949-104026138:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7960082888603	2	529.797675	1057.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.627	1	48.002	47.502	48.502	1.3751								0	0	0	0.16797	1	19530	19530		28.487	2.2187	1				10362	5746	5075	5098	12651	12651					0.05430913620079991
IDMRMMSGC	9	Unmodified	_IDMRMMSGC_					0	0	0			REV__ENST00000467906.5_1_6:43030793-43034124:+|nuORF	REV__ENST00000467906.5_1_6:43030793-43034124:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1043.414233386517	1	1043.41409	1042.40681	1.3969	0.0014576	0.90893	0.00094839	2.3059	0.002406	1043.4155990697527	17.159	0.47395	18.462	18.142	18.616	1.3023					19	15	2	0	0	0	0.83213	1	7096	7096		2.0598	1.2661	1	510790	+		10363	13253	5076	5099	12652	12652					-0.1126939773516824
IDNALSILL	9	Unmodified	_IDNALSILL_					0	0	0		tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	971.5771972537041	1	971.577174	970.569897	1.5692	0.0015246	-0.7843	-0.00076201	0.78491	0.0007626	971.576188826175	70.674	0.46284	70.674	70.477	70.94	0					38	14	4	0	0	0	0.029061	1	29427	29427		88.954	3.3123	1	8818000			10364	16062	5077	5100	12653	12653					0.08343511245811897
IDNALSILL	9	Unmodified	_IDNALSILL_					0	0	0		tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	tr|A0A553SFK7|A0A553SFK7_NIACIAdapterproteinMecAOS=NialliacirculansOX=1397GN=mecAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5794555544853	1	971.577174	970.569897	1.6393	0.0015927	0.22398	0.00021761	1.8633	0.0018103	971.5773924745769	69.121	0.53832	70.486	70.22	70.758	1.3657					40	17	3	0	0	0	0.057024	1	28948	28948		65.235	2.6623	1	26375000			10365	16062	5077	5100	12654	12654					0.08343511245811897
IDNCEPEEK	9	Unmodified	_IDNCEPEEK_					0	0	0			REV__nc|ENSG00000110799|P04275-2|VWF	REV__nc|ENSG00000110799|P04275-2|VWF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4899780154228	3	359.49034	1075.44919	-2.0549	-0.00073871	-0.21563	-7.7518E-05	-2.2705	-0.00081623	359.4905403607487	15.784	0.52697	15.784	15.497	16.024	0					33	16	3	0	0	0	0.76456	1	6567	6567		2.7352	0.23671	1	768890	+		10366	14407	5078	5101	12655	12655					-0.08551684529993508
IDNCEPEEK	9	Unmodified	_IDNCEPEEK_					0	0	0			REV__nc|ENSG00000110799|P04275-2|VWF	REV__nc|ENSG00000110799|P04275-2|VWF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	359.49034	1075.44919	-2.0549	-0.00073871	-0.21563	-7.7518E-05	-2.2705	-0.00081623	359.4905403607487	15.784	0.52697	15.784	15.497	16.024	0	-0.16126	0.0010273	NaN	2.7352	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	768890	+		10367	14407	5078	5101							-0.08551684529993508
IDNCEPEEK	9	Unmodified	_IDNCEPEEK_					0	0	0			REV__nc|ENSG00000110799|P04275-2|VWF	REV__nc|ENSG00000110799|P04275-2|VWF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	359.49034	1075.44919	0.087422	3.1427E-05	-2.0003	-0.00071909	-1.9129	-0.00068766	359.489700698686	15.787	0.3747	15.917	15.65	16.025	0.13022	-0.028006	-0.00089739	NaN	2.7352	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298880	+		10368	14407	5078	5101							-0.08551684529993508
IDNLEADK	8	Unmodified	_IDNLEADK_					0	0	0			REV__tr|A0A553SSU9|A0A553SSU9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03875PE=4SV=1	REV__tr|A0A553SSU9|A0A553SSU9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03875PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1723205447197	2	459.232364	916.450176	0.91737	0.00042129	-1.4949	-0.00068651	-0.57754	-0.00026523	459.2314921133827	14.537	0.21594	14.65	14.605	14.821	0.11295					10	6	2	0	0	0	2.3239	1	6074	6074		9.3474	0	1	198940	+		10369	15215	5079	5102	12656	12656					-0.011391020987730371
IDNLVAPPA	9	Unmodified	_IDNLVAPPA_					0	0	0			REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2479125857353	3	303.839521	908.496732	2.0312	0.00061715	-1.0686	-0.00032468	0.96258	0.00029247	303.83882710007714	96.851	0.77699	96.956	96.604	97.381	0.105					41	24	2	0	0	0	0.11938	1	40696	40696		0.26902	0	1	682690	+		10370	9503	5080	5103	12657	12657					0.03882382523170236
IDNMLPSCES	10	Unmodified	_IDNMLPSCES_					0	0	0			REV__ENSG00000129083|ENST00000439561|COPB1	REV__ENSG00000129083|ENST00000439561|COPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7361938357353	2	554.736099	1107.45765	2.658	0.0014745	-1.491	-0.00082711	1.167	0.00064739	554.7349415423315	75.12	0.3427	76.902	76.76	77.103	1.7817					26	10	3	0	0	0	0.60583	1	31544	31544		22.736	0	1	2355800	+		10371	9745	5081	5104	12658	12658					-0.0917845388501064
IDNMLPSCES	10	Unmodified	_IDNMLPSCES_					0	0	0			REV__ENSG00000129083|ENST00000439561|COPB1	REV__ENSG00000129083|ENST00000439561|COPB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	554.736099	1107.45765	2.658	0.0014745	-1.491	-0.00082711	1.167	0.00064739	554.7349415423315	75.12	0.3427	76.902	76.76	77.103	1.7817	0.0029808	0.00030088	NaN	22.736	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2355800	+		10372	9745	5081	5104							-0.0917845388501064
IDPFSEDFS	9	Unmodified	_IDPFSEDFS_					0	0	0		tr|A0A7D6ZVJ6|A0A7D6ZVJ6_9CLOTPeptidechainreleasefactor3OS=ClostridiumintestinaleOX=36845GN=prfCPE=3SV=1	tr|A0A7D6ZVJ6|A0A7D6ZVJ6_9CLOTPeptidechainreleasefactor3OS=ClostridiumintestinaleOX=36845GN=prfCPE=3SV=1	tr|A0A7D6ZVJ6|A0A7D6ZVJ6_9CLOTPeptidechainreleasefactor3OS=ClostridiumintestinaleOX=36845GN=prfCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	529.3416015505791	2	528.729655	1055.44476	2.9205	0.0015442	3.3994	0.0017974	6.32	0.0033415	529.2327167300704	74.963	0.15408	76.744	76.668	76.822	1.7817					6	4	2	0	0	0	0.11719	1	31428	31428		7.2892	0.93513	1	220060			10373	17154	5082	5105	12659	12659					-0.08074825681228504
IDRELAEV	8	Unmodified	_IDRELAEV_					0	0	0			REV__ENSG00000102781|ENST00000380615|KATNAL1	REV__ENSG00000102781|ENST00000380615|KATNAL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7568237185478	2	472.756007	943.497461	0.80022	0.00037831	1.0184	0.00048143	1.8186	0.00085974	472.7561267720245	22.139	0.28059	23.755	23.61	23.89	1.6158					17	8	3	0	0	0	0.73597	1	9217	9217		26.884	4.1474	1	1362300	+		10374	9082	5083	5106	12660	12660					0.023451771722307058
IDSCQGDSGGP	11	Unmodified	_IDSCQGDSGGP_					0	0	0		ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2064697146416	2	518.206021	1034.39749	3.1183	0.0016159	-1.7334	-0.00089827	1.3848	0.00071764	518.2050219783588	65.31	0.46489	66.709	66.476	66.941	1.3989					37	14	3	0	0	0	0.62604	1	27405	27405		20.415	5.1661	1	6264300			10375	3392	5084	5107	12661	12661					-0.11833428223849296
IDSCQGDSGGP	11	Unmodified	_IDSCQGDSGGP_					0	0	0		ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	ENSG00000154646|ENST00000284885|TMPRSS15	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	518.206021	1034.39749	1.9709	0.0010213	-2.022	-0.0010478	-0.051132	-2.6497E-05	518.2050079301031	64.92	0.437	66.829	66.564	67.001	1.9085	0.060188	-0.00014967	NaN	20.415	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4374700			10376	3392	5084	5107							-0.11833428223849296
IDSLSVVGL	9	Unmodified	_IDSLSVVGL_					0	0	0			REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7646972537041	2	451.7633	901.512048	2.9183	0.0013184	-0.43702	-0.00019743	2.4813	0.001121	451.76303681381415	79.628	0.40135	80.879	80.739	81.14	1.2512					21	12	2	0	0	0	0.069258	1	33421	33421		60.39	9.5345	1	2955600	+		10377	9443	5085	5108	12662	12662					0.057352493203779886
IDSLSVVGL	9	Unmodified	_IDSLSVVGL_					0	0	0			REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	REV__nc|ENSG00000115592|Q9UGI9-2|PRKAG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5244628787041	1	902.519325	901.512048	1.6439	0.0014837	0.0034588	3.1216E-06	1.6474	0.0014868	902.5191831895478	79.249	0.43216	80.984	80.753	81.185	1.735					40	13	4	0	0	0	0.03795	1	33181	33181		77.984	7.2688	1	13914000	+		10378	9443	5085	5108	12663	12663					0.057352493203779886
IDVLLTGHQH	10	Unmodified	_IDVLLTGHQH_					0	0	0		tr|A0A553SPL5|A0A553SPL5_NIACIBifunctionalmetallophosphatase/5'-nucleotidaseOS=NialliacirculansOX=1397GN=CEQ21_26605PE=3SV=1	tr|A0A553SPL5|A0A553SPL5_NIACIBifunctionalmetallophosphatase/5'-nucleotidaseOS=NialliacirculansOX=1397GN=CEQ21_26605PE=3SV=1	tr|A0A553SPL5|A0A553SPL5_NIACIBifunctionalmetallophosphatase/5'-nucleotidaseOS=NialliacirculansOX=1397GN=CEQ21_26605PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1132.750781238079	1	1132.61093	1131.60366	0.30045	0.0003403	-2.6597	-0.0030124	-2.3592	-0.0026721	1133.6090635379594	31.561	0.15334	32.842	32.773	32.926	1.2813					5	4	2	0	0	0	0.87699	1	13228	13228		3.9444	1.0552	1	628830			10379	16476	5086	5109	12664	12664					0.0431193273759618
IDVYPAFIC	9	Unmodified	_IDVYPAFIC_					0	0	0			REV__nc|ENSG00000159917|Q14590-2|ZNF235	REV__nc|ENSG00000159917|Q14590-2|ZNF235	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1040.521289050579	1	1040.51213	1039.50485	5.6545	0.0058835	-2.2647	-0.0023564	3.3898	0.0035271	1040.5115195005217	89.305	0.68815	90.709	90.425	91.113	1.4044					38	21	3	0	0	0	0.46905	1	37538	37538		16.942	5.302	1	3706400	+		10380	10585	5087	5110	12665	12665					-0.013318065517069044
IEAEESTPVF	10	Unmodified	_IEAEESTPVF_					0	0	0			REV__tr|A0A7D6VSK9|A0A7D6VSK9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23155PE=4SV=1	REV__tr|A0A7D6VSK9|A0A7D6VSK9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23155PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2734863162041	2	561.271687	1120.52882	0.79187	0.00044445	3.9803	0.0022341	4.7722	0.0026785	561.273480305671	51.048	0.30257	52.442	52.287	52.589	1.3938					18	9	3	0	0	0	0.65574	1	21360	21360		20.454	3.3407	1	1801800	+		10381	15453	5088	5111	12666	12666					-0.026622945843200796
IEARLEQWLQR	11	Unmodified	_IEARLEQWLQR_					0	0	0			REV__ENST00000528911.5_1_19:17516975-17531198:+|nuORF	REV__ENST00000528911.5_1_19:17516975-17531198:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	720.9622680544853	2	721.39915	1440.78375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.965	1	98.222	97.722	98.722	0.25636								0	0	0	0.63772	1	41216	41216		10.151	4.8537	1		+		10382	13689	5089	5112	12667	12667					0.08098611674540734
IEDRIYSYKLL	11	Unmodified	_IEDRIYSYKLL_					0	0	0		tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	706.8956176638603	2	706.892835	1411.77112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.23	1	114.41	113.91	114.91	0.17579								0	0	0	0.63775	1	49502	49502		5.2969	0.76802	1				10383	16694	5090	5113	12668	12668					0.08170155491643527
IEDRIYSYKLL	11	Unmodified	_IEDRIYSYKLL_					0	0	0		tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	tr|A0A553SUH3|A0A553SUH3_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_06980PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	706.8963500857353	2	706.892835	1411.77112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.79	1	115.94	115.44	116.44	0.15228								0	0	0	0.63775	1	50056	50056		5.2969	0.76802	1				10384	16694	5090	5113	12669	12669					0.08170155491643527
IEEAVWNNL	9	Unmodified	_IEEAVWNNL_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2750121951103	2	544.274564	1086.53457	2.3834	0.0012972	-0.24067	-0.00013099	2.1428	0.0011663	544.274445484565	75.583	0.43419	76.889	76.646	77.08	1.3063					40	13	4	0	0	0	0.44535	2	31688	31688;31792		18.135	0.81637	1	7307400	+		10385	10538	5091	5114	12670;12671	12670					-0.005231512820046191
IEEAVWNNL	9	Unmodified	_IEEAVWNNL_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2753173708916	2	544.274564	1086.53457	2.7396	0.0014911	-0.88322	-0.00048071	1.8564	0.0010104	544.2741595457899	75.242	0.43546	77.024	76.73	77.166	1.7817					36	13	4	0	0	0	0.34572	1	31543	31543		23.148	1.4018	1	5042800	+		10386	10538	5091	5114	12672	12672					-0.005231512820046191
IEEAVWNNL	9	Unmodified	_IEEAVWNNL_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.274564	1086.53457	2.3834	0.0012972	-0.24067	-0.00013099	2.1428	0.0011663	544.274445484565	75.583	0.43419	76.889	76.646	77.08	1.3063	-0.067078	0.0003497	NaN	23.148	40	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7307400	+		10387	10538	5091	5114							-0.005231512820046191
IEEAVWNNL	9	Unmodified	_IEEAVWNNL_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	544.274564	1086.53457	2.7396	0.0014911	-0.88322	-0.00048071	1.8564	0.0010104	544.2741595457899	75.242	0.43546	77.024	76.73	77.166	1.7817	0.067078	-0.00034975	NaN	23.148	36	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5042800	+		10388	10538	5091	5114							-0.005231512820046191
IEEELGSK	8	Unmodified	_IEEELGSK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.7350036501884	2	452.73474	903.454927	0.13566	6.142E-05	1.4228	0.00064417	1.5585	0.00070559	452.73517383153137	13.358	0.18613	14.084	13.977	14.163	0.72639					8	5	2	0	0	0	0.55655	1	5555	5555		43.772	3.8227	1	654100			10389	919	5092	5115	12673	12673					-0.0006621795597538949
IEEELGSK	8	Unmodified	_IEEELGSK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.7348815798759	2	452.73474	903.454927	0.3367	0.00015243	-0.39157	-0.00017728	-0.054872	-2.4842E-05	452.734503199022	13.186	0.12913	14.014	13.934	14.063	0.82788					9	4	3	0	0	0	0.55655	1	5461	5461		43.772	3.8227	1	588700			10390	919	5092	5115	12674	12674					-0.0006621795597538949
IEEIKEFPL	9	Unmodified	_IEEIKEFPL_					0	0	0			REV__tr|A0A553SSF2|A0A553SSF2_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02795PE=4SV=1	REV__tr|A0A553SSF2|A0A553SSF2_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.3132812380791	2	559.310615	1116.60668	1.2058	0.00067442	4.1417	0.0023165	5.3475	0.0029909	559.3123146396579	72.188	0.37999	72.188	72.016	72.396	0					32	11	4	0	0	0	0.68551	1	30111	30111		7.9102	1.187	1	617220	+		10391	15203	5093	5116	12675	12675					0.05303763071697176
IEELAELIF	9	Unmodified	_IEELAELIF_					0	0	0		NCOA2-EIF3H|1|fusion;ENSG00000140396|ENST00000452400|NCOA2	NCOA2-EIF3H|1|fusion;ENSG00000140396|ENST00000452400|NCOA2	NCOA2-EIF3H|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8008911013603	2	538.79734	1075.58013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.776	1	86.372	85.872	86.872	1.5962								0	0	0	0.14418	1	35558	35558		30.225	3.8835	1				10392	8034;2913	5094	5117	12676	12676					0.04536074180373362
IEEMLKQRREQ	11	Unmodified	_IEEMLKQRREQ_					0	0	0			REV__nc|ENSG00000122482|Q9H582-2|ZNF644	REV__nc|ENSG00000122482|Q9H582-2|ZNF644	MSMS	GG20161007_CRH_Patient100_W632_01	3	730.1926757693291	2	730.387925	1458.7613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.167	1	97.451	96.951	97.951	0.28442								0	0	0	0.63775	1	40885	40885		5.2969	2.3016	1		+		10393	9608	5095	5118	12677	12677					0.050266442146266854
IEEQMTHRKM	10	Unmodified	_IEEQMTHRKM_					0	0	0		nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8831970095634	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.633	1	50.021	49.521	50.521	1.388								0	0	0	0.66222	1	20358	20358		0.69767	0.24315	1				10394	7897	5096	5119	12678	12678					-0.0167201667441077
IEEQMTHRKM	10	Unmodified	_IEEQMTHRKM_					0	0	0		nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8832885622978	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.116	1	50.505	50.005	51.005	1.3886								0	0	0	0.66222	1	20561	20561		0.69767	0.24315	1				10395	7897	5096	5119	12679	12679					-0.0167201667441077
IEEQMTHRKM	10	Unmodified	_IEEQMTHRKM_					0	0	0		nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	nc|ENSG00000151914|Q03001-3|DST	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8834106326103	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.822	1	64.235	63.735	64.735	1.4134								0	0	0	0.66218	1	26348	26348		0.77653	0.50751	1				10396	7897	5096	5119	12680	12680					-0.0167201667441077
IEERDRRRQKQ	11	Unmodified	_IEERDRRRQKQ_					0	0	0		nc|ENSG00000180376|A2RUB6-3|CCDC66;ENSG00000180376|ENST00000394672|CCDC66;ENST00000468108.1_1_3:56627740-56649353:+|nuORF;ENST00000471681.5_1_3:56606414-56647710:+|nuORF	nc|ENSG00000180376|A2RUB6-3|CCDC66	nc|ENSG00000180376|A2RUB6-3|CCDC66	MSMS	GG20161007_CRH_Patient100_W632_02	4	757.2885619997978	2	757.418936	1512.82332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.332	1	97.638	97.138	98.138	0.3062								0	0	0	0.63775	1	40942	40942		2.7352	0	1				10397	4546	5097	5120	12681	12681					0.08742131677968246
IEESLTSFEI	10	Unmodified	_IEESLTSFEI_					0	0	0			REV__tr|A0A7D6VU16|A0A7D6VU16_9CLOTDnaDdomainproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23745PE=4SV=1	REV__tr|A0A7D6VU16|A0A7D6VU16_9CLOTDnaDdomainproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23745PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.8657714724541	3	389.864172	1166.57069	1.7037	0.00066422	3.3317	0.0012989	5.0354	0.0019631	389.8651701849764	41.091	0.4404	42.416	42.21	42.65	1.3254					39	13	4	0	0	0	0.80072	1	17209	17209		12.175	0.68004	1	7355100	+		10398	15508	5098	5121	12682	12682					-0.005937388958045631
IEEVLAVLS	9	Unmodified	_IEEVLAVLS_					0	0	0			REV__ENST00000428135.7_1_7:17831871-17832039:-|nuORF	REV__ENST00000428135.7_1_7:17831871-17832039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7850829958916	2	486.784233	971.553913	2.5544	0.0012435	-0.62566	-0.00030456	1.9288	0.0009389	486.7836414637707	85.774	0.40565	85.774	85.572	85.978	0					26	12	3	0	0	0	0.37357	1	35785	35785		21.747	4.8044	1	4269100	+		10399	13008	5099	5122	12683	12683					0.06699805008918247
IEFEYNVVSS	10	Unmodified	_IEFEYNVVSS_					0	0	0			REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	REV__ENST00000548511.5_1_12:88439351-88442196:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.7867919802666	2	593.784961	1185.55537	2.1266	0.0012627	0.85248	0.00050619	2.9791	0.0017689	593.7854608227688	74.954	1.8684	74.954	74.173	76.041	0					128	58	3	0	0	0	0.88579	1	31221	31221		2.9952	0.93549	1	1620400	+		10400	9878	5100	5123	12684	12684					-0.02998605692982892
IEFRAHHHPF	10	Unmodified	_IEFRAHHHPF_					0	0	0			REV__tr|A0A553SMD9|A0A553SMD9_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22420PE=4SV=1	REV__tr|A0A553SMD9|A0A553SMD9_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22420PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883239626884	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.515	1	57.515	57.015	58.015	0								0	0	0	0.66254	1	24002	24002		0.15932	0	1		+		10401	15014	5101	5124	12685	12685					0.008538634428759906
IEGEEDQQGI	10	Unmodified	_IEGEEDQQGI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2540771365166	2	559.254025	1116.4935	1.665	0.00093115	-2.4995	-0.0013979	-0.83453	-0.00046672	559.2528310702836	82.57	0.36893	82.57	82.4	82.769	0					34	11	4	0	0	0	0.81324	2	34420	34370;34420		10.824	2.2306	1	3233800			10402	4386	5102	5125	12686;12687	12687					-0.06008957112135249
IEGEEDQQGI	10	Unmodified	_IEGEEDQQGI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2553588747978	2	559.254025	1116.4935	3.1595	0.001767	-1.3915	-0.00077822	1.768	0.00098874	559.2534026704495	81.098	0.40242	82.331	82.161	82.564	1.2332					35	12	4	0	0	0	0.81324	1	34089	34089		10.824	2.9138	1	4153400			10403	4386	5102	5125	12688	12688					-0.06008957112135249
IEGEEDQQGI	10	Unmodified	_IEGEEDQQGI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2533447146416	2	559.254025	1116.4935	2.0406	0.0011412	-0.8403	-0.00046994	1.2003	0.00067125	559.2530426516687	80.715	0.36694	82.41	82.18	82.547	1.6959					29	11	4	0	0	0	0.75645	1	33844	33844		15.847	1.0089	1	2826300			10404	4386	5102	5125	12689	12689					-0.06008957112135249
IEGEEDQQGI	10	Unmodified	_IEGEEDQQGI_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	559.254025	1116.4935	2.0907	0.0011692	-2.311	-0.0012924	-0.22025	-0.00012318	559.2526062795412	82.129	0.40022	82.41	82.182	82.582	0.2802	-0.020872	-0.00048359	NaN	15.847	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2107100			10405	4386	5102	5125							-0.06008957112135249
IEHLGLNVVL	10	Unmodified	_IEHLGLNVVL_					0	0	0		nc|ENSG00000141314|P58872-2|RHBDL3;nc|ENSG00000141314|P58872-3|RHBDL3;ENSG00000141314|ENST00000269051|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	nc|ENSG00000141314|P58872-2|RHBDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8308593630791	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.82659	1	29834	29834		9.3831	2.66	1	5931400			10406	2952	5103	5126	12690	12690					0.10094577919812764
IEKECNPNEIL	11	Unmodified	_IEKECNPNEIL_					0	0	0		tr|A0A7D6W1Z5|A0A7D6W1Z5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04565PE=4SV=1	tr|A0A7D6W1Z5|A0A7D6W1Z5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04565PE=4SV=1	tr|A0A7D6W1Z5|A0A7D6W1Z5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04565PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	651.6550781130791	2	651.323928	1300.6333	0.43616	0.00028408	-3.7014	-0.0024108	-3.2653	-0.0021267	651.3229138319717	53.199	0.4944	54.599	54.216	54.711	1.4005					19	15	2	0	0	0	0.14479	1	22185	22185		17.113	8.3675	1	1442000			10407	17026	5104	5127	12691	12691					-0.0049891609926362435
IEKEKREHAKQ	11	Unmodified	_IEKEKREHAKQ_					0	0	0		ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENST00000519169.5_1_8:131191508-131249207:-|nuORF;ASAP1|p.K992Qfs*25|1|0.06|ENSG00000153317|chr8:130060797-130060798|-/G|frameshift_variant	ENSG00000153317|ENST00000518721|ASAP1	ENSG00000153317|ENST00000518721|ASAP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	698.3926269412041	2	698.388782	1394.76301	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.97	1	101.17	100.67	101.67	0.20527								0	0	0	0.63775	1	42453	42453		2.9952	0.26005	1				10408	3354	5105	5128	12692	12692					0.08142021294884216
IEKFYDELLYY	11	Unmodified	_IEKFYDELLYY_					0	0	0			REV__tr|A0A7D6ZZF2|A0A7D6ZZF2_9CLOTBaseplateJ/gp47familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20080PE=3SV=1	REV__tr|A0A7D6ZZF2|A0A7D6ZZF2_9CLOTBaseplateJ/gp47familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20080PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	748.7427245974541	2	748.371401	1494.72825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.327	1	97.633	97.133	98.133	0.3062								0	0	0	0.63766	1	40940	40940		16.149	8.5402	1		+		10409	15793	5106	5129	12693	12693					0.0006734064359079639
IEKGKYVYYRR	11	Unmodified	_IEKGKYVYYRR_					0	0	0			REV__tr|A0A7D6VN45|A0A7D6VN45_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_16155PE=4SV=1	REV__tr|A0A7D6VN45|A0A7D6VN45_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_16155PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	737.1252929568291	2	737.911893	1473.80923	3.1163	0.0022996	-4.2109	-0.0031073	-1.0946	-0.00080773	737.9093947410887	96.991	0.10292	97.275	97.194	97.297	0.28442					5	4	2	0	0	0	0.14592	1	40778	40778		10.8	5.9025	1	3379000	+		10410	15328	5107	5130	12694	12694					0.09128086196960794
IEKIRLLTLKA	11	Unmodified	_IEKIRLLTLKA_					0	0	0		ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	649.4333984255791	2	649.43193	1296.84931	1.5012	0.0009749	1.5192	0.0009866	3.0203	0.0019615	649.4323624524196	105.96	0.13455	105.96	105.89	106.03	0					18	6	4	0	0	0	0.98155	1	45098	45098		4.897	3.5675	1	75026000			10411	5331	5108	5131	12695	12695					0.2127563286755958
IEKIRLLTLKA	11	Unmodified	_IEKIRLLTLKA_					0	0	0		ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	649.4328491091728	2	649.43193	1296.84931	2.666	0.0017314	0.65333	0.00042429	3.3194	0.0021557	649.4320201755886	105.92	0.13867	105.97	105.9	106.04	0.05455					16	6	3	0	0	0	0.98155	1	45005	45005		4.897	1.3005	1	87928000			10412	5331	5108	5131	12696	12696					0.2127563286755958
IEKIRLLTLKA	11	Unmodified	_IEKIRLLTLKA_					0	0	0		ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.4337036013603	2	649.43193	1296.84931	2.8417	0.0018455	-0.41094	-0.00026688	2.4307	0.0015786	649.4312827393261	105.89	0.15666	106.05	105.96	106.12	0.15859					28	7	5	0	0	0	0.98155	1	45188	45188		4.897	0.36815	1	377720000			10413	5331	5108	5131	12697	12697					0.2127563286755958
IEKIRLLTLKA	11	Unmodified	_IEKIRLLTLKA_					0	0	0		ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.4333373904228	2	649.43193	1296.84931	3.2827	0.0021319	-1.3036	-0.00084663	1.979	0.0012852	649.430897614132	105.86	0.16074	106.02	105.95	106.11	0.16679					21	7	4	0	0	0	0.98155	1	45123	45123		4.897	3.4151	1	231290000			10414	5331	5108	5131	12698	12698					0.2127563286755958
IEKKKLKRHQ	10	Unmodified	_IEKKKLKRHQ_					0	0	0		tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.4213134646416	2	654.417146	1306.81974	2.9172	0.001909	3.7408	0.0024481	6.658	0.0043571	654.4196942854946	105.87	0.15476	106.03	105.94	106.1	0.15859					24	7	5	0	0	0	0.89803	1	45182	45182		1.4819	1.0236	1	173480000			10415	16518	5109	5132	12699	12699					0.17860113642086617
IEKKKLKRHQ	10	Unmodified	_IEKKKLKRHQ_					0	0	0		tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	tr|A0A553SQI0|A0A553SQI0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.4204589724541	2	654.417146	1306.81974	3.2277	0.0021123	2.1459	0.0014043	5.3737	0.0035166	654.418713992066	105.85	0.13731	106.01	105.94	106.07	0.16679					21	6	4	0	0	0	0.89803	1	45108	45108		1.4819	0.28856	1	180190000			10416	16518	5109	5132	12700	12700					0.17860113642086617
IEKKQKMI	8	Unmodified	_IEKKQKMI_					0	0	0			REV__ENSG00000158486|ENST00000698260|DNAH3	REV__ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3122131228447	2	509.309895	1016.60524	2.027	0.0010324	3.3964	0.0017298	5.4234	0.0027622	509.31164630594265	77.614	0.37148	77.614	77.44	77.811	0					27	11	3	0	0	0	0.88587	1	32340	32340		5.2307	0	1	3517500	+		10417	10556	5110	5133	12701	12701					0.09759850501984602
IEKLHKRIYL	10	Unmodified	_IEKLHKRIYL_					0	0	0			REV__tr|A0A7D7A0W4|A0A7D7A0W4_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11830PE=4SV=1	REV__tr|A0A7D7A0W4|A0A7D7A0W4_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	438.2764770388603	3	438.27484	1311.80269	4.2445	0.0018603	-0.64161	-0.0002812	3.6029	0.0015791	438.27444087314257	95.412	0.36407	95.834	95.675	96.039	0.4212					43	13	4	0	0	0	0.88031	1	40158	40158		3.5871	0	1	7997100	+		10418	15816	5111	5134	12702	12702					0.1592619303628453
IEKLKEIVPDV	11	Unmodified	_IEKLKEIVPDV_					0	0	0		tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8846923708916	2	641.884478	1281.7544	1.6316	0.0010473	-2.4471	-0.0015707	-0.81544	-0.00052342	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	0.98155	1	33234	33234		4.897	3.2444	1	3189400			10419	16266	5112	5135	12703	12703					0.12479654605704127
IEKLKEIVPDV	11	Unmodified	_IEKLKEIVPDV_					0	0	0		tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8862182497978	2	641.884478	1281.7544	2.163	0.0013884	-1.3989	-0.00089793	0.76412	0.00049048	641.8836429475442	78.151	1.4143	79.432	78.823	80.238	1.2809					100	45	3	0	0	0	0.87205	1	32927	32927		11.495	2.7493	1	2775700			10420	16266	5112	5135	12704	12704					0.12479654605704127
IEKLKEIVPDV	11	Unmodified	_IEKLKEIVPDV_					0	0	0		tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	tr|A0A553SJZ3|A0A553SJZ3_NIACIDNApolymeraseIOS=NialliacirculansOX=1397GN=polAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8848754763603	2	641.884478	1281.7544	1.4898	0.00095626	-1.2969	-0.00083243	0.19292	0.00012383	641.8838270268691	77.925	1.6654	79.677	79.073	80.738	1.7514					106	53	3	0	0	0	0.77451	2	32749	32749;32805		16.149	3.9084	1	2328100			10421	16266	5112	5135	12705;12706	12705					0.12479654605704127
IEKLKLESLVP	11	Unmodified	_IEKLKLESLVP_					0	0	0			REV__nc|ENSG00000117650|P51955-3|NEK2	REV__nc|ENSG00000117650|P51955-3|NEK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	634.8945800662041	2	634.894846	1267.77514	2.5937	0.0016467	-2.4529	-0.0015573	0.1408	8.9392E-05	634.893122609994	94.257	0.50206	94.402	94.165	94.667	0.14493					62	15	5	0	0	0	1.0224	2	39439	39439;39490		5.2969	3.815	1	18758000	+		10422	9506	5113	5136	12707;12708	12707					0.1519624498534995
IEKLLRSPTRN	11	Unmodified	_IEKLLRSPTRN_					0	0	0			REV__ENSG00000130035|ENST00000252318|GALNT8	REV__ENSG00000130035|ENST00000252318|GALNT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8975707888603	2	663.896243	1325.77793	3.1315	0.002079	0.016293	1.0817E-05	3.1478	0.0020898	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	1.0174	1	34482	34482		2.7352	0	1	4734100	+		10423	9762	5114	5137	12709	12709					0.12807513162897521
IEKLRKLKRDR	11	Unmodified	_IEKLRKLKRDR_					0	0	0		ENST00000607166.1_1_10:31606775-31606847:-|nuORF	ENST00000607166.1_1_10:31606775-31606847:-|nuORF	ENST00000607166.1_1_10:31606775-31606847:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	727.9705078005791	2	727.967534	1453.92051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.72	1	102.88	102.38	103.38	0.16445								0	0	0	0.63775	1	43261	43261		1.3295	0.13619	1				10424	7565	5115	5138	12710	12710					0.21171145624907695
IEKQKLIWEPQ	11	Unmodified	_IEKQKLIWEPQ_					0	0	0			REV__DNAJC28|p.N315Qfs*3|1|0.06|ENSG00000177692|chr21:33488451-33488452|-/TG|frameshift_variant	REV__DNAJC28|p.N315Qfs*3|1|0.06|ENSG00000177692|chr21:33488451-33488452|-/TG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	706.9586059451103	2	706.400827	1410.7871	2.6979	0.0019058	-1.4762	-0.0010428	1.2216	0.00086297	706.4008600249466	105.83	0.093536	105.99	105.92	106.02	0.15859					11	4	3	0	0	0	0.14606	1	45142	45142		4.897	3.5675	1	8796300	+		10425	8453	5116	5139	12711	12711					0.09813861728571283
IEKRDEKK	8	Unmodified	_IEKRDEKK_					0	0	0		tr|A0A553SID7|A0A553SID7_NIACIFadRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14680PE=4SV=1	tr|A0A553SID7|A0A553SID7_NIACIFadRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14680PE=4SV=1	tr|A0A553SID7|A0A553SID7_NIACIFadRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14680PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3045532107353	2	523.303655	1044.59276	1.6925	0.00088571	-0.3583	-0.0001875	1.3342	0.00069821	523.303552086807	68.689	1.446	70.542	69.657	71.103	1.853					108	46	3	0	0	0	0.89051	1	28632	28632		2.3027	0	1	7991600			10426	16189	5117	5140	12712	12712					0.07224530363282611
IEKREELFRSR	11	Unmodified	_IEKREELFRSR_					0	0	0			REV__PCNT|p.S1469Ffs*68|1|0.09|ENSG00000160299|chr21:46397454-46397454|C/-|frameshift_variant	REV__PCNT|p.S1469Ffs*68|1|0.09|ENSG00000160299|chr21:46397454-46397454|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	732.2008544802666	2	731.909882	1461.80521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.05	1	101.26	100.76	101.76	0.20527								0	0	0	0.63775	1	42490	42490		5.2969	0	1		+		10427	10598	5118	5141	12713	12713					0.09277996703258395
IEKRKRQRQKK	11	Unmodified	_IEKRKRQRQKK_					0	0	0		ENSG00000022840|ENST00000325954|RNF10;nc|ENSG00000022840|Q8N5U6-2|RNF10	ENSG00000022840|ENST00000325954|RNF10	ENSG00000022840|ENST00000325954|RNF10	MSMS	GG20161007_CRH_Patient100_W632_02	4	749.4770995974541	2	749.476057	1496.93756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.24	1	102.43	101.93	102.93	0.19076								0	0	0	0.63775	1	42996	42996		1.3295	0.13619	1				10428	616	5119	5142	12714	12714					0.2089706623071379
IEKRRKIAHL	10	Unmodified	_IEKRRKIAHL_					0	0	0			REV__ENST00000504251.6_1_5:40728574-40756023:-|nuORF	REV__ENST00000504251.6_1_5:40728574-40756023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.4075195193291	2	632.404038	1262.79352	2.859	0.0018081	0.99388	0.00062853	3.8529	0.0024366	632.4045549574485	105.89	0.15666	106.05	105.96	106.12	0.15859					28	7	5	0	0	0	0.89803	1	45189	45189		1.4819	0	1	393960000	+		10429	9389	5120	5143	12715	12715					0.17263844470608092
IEKRRKIAHL	10	Unmodified	_IEKRRKIAHL_					0	0	0			REV__ENST00000504251.6_1_5:40728574-40756023:-|nuORF	REV__ENST00000504251.6_1_5:40728574-40756023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.4066039919853	2	632.404038	1262.79352	2.7731	0.0017537	0.89908	0.00056858	3.6722	0.0023223	632.4045690957387	105.87	0.16074	106.04	105.95	106.11	0.16679					26	7	5	0	0	0	0.89803	1	45124	45124		1.4819	0	1	275150000	+		10430	9389	5120	5143	12716	12716					0.17263844470608092
IEKVLLKRGW	10	Unmodified	_IEKVLLKRGW_					0	0	0		ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	ENST00000478282.1_1_21:44514579-44514991:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3936035037041	2	621.390065	1240.76558	2.9523	0.0018346	3.3568	0.0020859	6.3091	0.0039204	621.3920755885956	91.335	0.4286	92.701	92.438	92.867	1.366					38	13	3	0	0	0	0.88022	1	38437	38437		3.5965	0	1	10777000			10431	6799	5121	5144	12717	12717					0.1548252149052587
IEKWKLKQKKK	11	Unmodified	_IEKWKLKQKKK_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3164550662041	3	486.316928	1455.92895	3.2094	0.0015608	-3.5819	-0.0017419	-0.37246	-0.00018113	486.31497638712597	105.77	0.15118	105.94	105.85	106	0.16679					18	7	3	0	0	0	1.0366	1	45062	45062		0.40827	0	1	59742000			10432	3407	5122	5145	12718	12718					0.21922699541528345
IEKWKLKQKKK	11	Unmodified	_IEKWKLKQKKK_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	486.316928	1455.92895	1.2247	0.00059561	-1.6251	-0.00079031	-0.40036	-0.0001947	486.31527592028226	105.85	0.11684	105.85	105.79	105.91	0	-0.040897	0.0020819	NaN	0.40827	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9145000			10433	3407	5122	5145							0.21922699541528345
IEKWKLKQKKK	11	Unmodified	_IEKWKLKQKKK_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	486.316928	1455.92895	3.4955	0.0016999	-4.6402	-0.0022566	-1.1447	-0.00055669	486.31362812727343	105.8	0.10072	105.86	105.8	105.9	0.05455	-0.036324	-0.002317	NaN	0.40827	12	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10109000			10434	3407	5122	5145							0.21922699541528345
IELRKLQKNKM	11	Unmodified	_IELRKLQKNKM_					0	0	0			REV__tr|A0A553SQA2|A0A553SQA2_NIACIDUF4275familyproteinOS=NialliacirculansOX=1397GN=CEQ21_21595PE=4SV=1	REV__tr|A0A553SQA2|A0A553SQA2_NIACIDUF4275familyproteinOS=NialliacirculansOX=1397GN=CEQ21_21595PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	700.9217407107353	2	700.923946	1399.83334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.893	1	98.12	97.62	98.62	0.22776								0	0	0	0.63775	1	41199	41199		5.7319	0.43497	1		+		10435	15126	5123	5146	12719	12719					0.14941603358988687
IELTRGRP	8	Unmodified	_IELTRGRP_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000007350	REV__CON__ENSEMBL:ENSBTAP00000007350	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2810546755791	2	471.279983	940.545414	3.1035	0.0014626	-1.2182	-0.0005741	1.8853	0.0008885	471.2794199188793	75.814	0.89359	76.136	75.678	76.572	0.32163					63	28	3	0	0	0	0.88587	1	31737	31737		5.2307	0	1	1833700	+	+	10436	8370	5124	5147	12720	12720					0.07276295882957129
IELTRGRP	8	Unmodified	_IELTRGRP_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000007350	REV__CON__ENSEMBL:ENSBTAP00000007350	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	471.279983	940.545414	3.2208	0.0015179	-0.73944	-0.00034848	2.4813	0.0011694	471.2790343744662	74.892	0.43747	76.199	75.936	76.374	1.3063	0.091861	-0.00022224	NaN	5.2307	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603970	+	+	10437	8370	5124	5147							0.07276295882957129
IENAGANYLS	10	Unmodified	_IENAGANYLS_					0	0	0		ENST00000518252.1_1_3:169511613-169514132:-|nuORF;MECOM-LRRC34|5|fusion;MECOM-LRRC34|2|fusion;ENST00000522080.5_1_3:169513982-169530312:-|nuORF;MECOM-LRRC34|4|fusion;MECOM-LRRC34|1|fusion;MECOM-LRRC34|6|fusion;MECOM-LRRC34|3|fusion;nc|ENSG00000171757|Q8IZ02-3|LRRC34;ENSG00000171757|ENST00000446859|LRRC34	ENST00000518252.1_1_3:169511613-169514132:-|nuORF	ENST00000518252.1_1_3:169511613-169514132:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.2924072146416	2	526.256371	1050.49819	2.0393	0.0010732	1.4879	0.00078304	3.5273	0.0018562	526.2571790289345	66.229	0.21464	67.618	67.536	67.751	1.3887					10	6	2	0	0	0	0.12372	1	27777	27777		15.248	3.6082	1	164810			10438	4204	5125	5148	12721	12721					-0.025040281787141794
IENKFENGSI	10	Unmodified	_IENKFENGSI_					0	0	0			REV__tr|A0A7D6VS43|A0A7D6VS43_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04670PE=4SV=1	REV__tr|A0A7D6VS43|A0A7D6VS43_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7908203005791	2	575.790578	1149.5666	1.4297	0.00082319	2.8278	0.0016282	4.2574	0.0024514	575.792547152794	83.929	1.2876	85.117	84.736	86.024	1.1879					70	41	3	0	0	0	0.25819	1	35275	35275		41.84	1.8899	1	4688200	+		10439	15434	5126	5149	12722	12722					-0.002197835988454244
IENPRVGLL	9	Unmodified	_IENPRVGLL_					0	0	0		tr|A0A553SP34|A0A553SP34_NIACIPhosphateacyltransferaseOS=NialliacirculansOX=1397GN=plsXPE=3SV=1	tr|A0A553SP34|A0A553SP34_NIACIPhosphateacyltransferaseOS=NialliacirculansOX=1397GN=plsXPE=3SV=1	tr|A0A553SP34|A0A553SP34_NIACIPhosphateacyltransferaseOS=NialliacirculansOX=1397GN=plsXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.8036376833916	2	505.803291	1009.59203	2.7581	0.0013951	0.45819	0.00023175	3.2163	0.0016268	505.8031205696398	44.455	0.72844	45.82	45.577	46.305	1.3653					38	22	3	0	0	0	0.46566	1	18693	18693		17.113	0	1	2056600			10440	16449	5127	5150	12723	12723					0.08761735714244878
IEPNFNTAF	9	Unmodified	_IEPNFNTAF_					0	0	0			REV__tr|A0A553SJP7|A0A553SJP7_NIACISaccharopinedehydrogenasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17120PE=4SV=1	REV__tr|A0A553SJP7|A0A553SJP7_NIACISaccharopinedehydrogenasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17120PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7591430544853	2	526.756007	1051.49746	2.1278	0.0011209	3.5811	0.0018864	5.709	0.0030072	526.7583783395431	68.77	0.62885	70.136	69.784	70.413	1.3657					59	19	4	0	0	0	0.51189	1	28853	28853		14.838	3.198	1	5373300	+		10441	14915	5128	5151	12724	12724					-0.026228228277659582
IEQDLLTSTDT	11	Unmodified	_IEQDLLTSTDT_					0	0	0			REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	618.3040649294853	2	618.303715	1234.59288	1.9962	0.0012343	-0.6045	-0.00037376	1.3917	0.00086052	618.3033328636932	71.868	0.34703	71.868	71.7	72.047	0					31	10	4	0	0	0	0.6971	1	29934	29934		18.373	0	1	3155800	+		10442	8437	5129	5152	12725	12725					-0.015035592180538515
IEQDLLTSTDT	11	Unmodified	_IEQDLLTSTDT_					0	0	0			REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	618.3044921755791	2	618.303715	1234.59288	1.5048	0.00093045	-0.21812	-0.00013487	1.2867	0.00079558	618.3036416247627	71.357	0.32187	71.68	71.527	71.848	0.32359					27	9	4	0	0	0	0.50855	2	29840	29840;29891		23.79	5.4167	1	3773500	+		10443	8437	5129	5152	12726;12727	12726					-0.015035592180538515
IEQDLLTSTDT	11	Unmodified	_IEQDLLTSTDT_					0	0	0			REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	REV__ENST00000602708.1_1_9:19230809-19276502:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3057739138603	2	618.303715	1234.59288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.927	1	71.765	71.265	72.265	1.8378								0	0	0	0.63769	1	29337	29337		13.615	0.5724	1		+		10444	8437	5129	5152	12728	12728					-0.015035592180538515
IEQKKRKLLPD	11	Unmodified	_IEQKKRKLLPD_					0	0	0		nc|ENSG00000225921|Q9UMY1-2|NOL7;ENSG00000225921|ENST00000451315|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	nc|ENSG00000225921|Q9UMY1-2|NOL7	MSMS	GG20161007_CRH_Patient100_W632_01	3	684.2545043826103	2	684.422094	1366.82963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.112	1	97.397	96.897	97.897	0.28442								0	0	0	0.63771	1	40860	40860		11.495	2.7493	1				10445	5293	5130	5153	12729	12729					0.1608925685682152
IERFYLNEI	9	Unmodified	_IERFYLNEI_					0	0	0			REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8213989138603	2	598.819138	1195.62372	2.9546	0.0017693	-0.79514	-0.00047615	2.1594	0.0012931	598.818710763631	62.505	0.39246	63.919	63.711	64.103	1.4134					41	12	4	0	0	0	0.35391	1	26282	26282		22.736	0	1	7341200	+		10446	11793	5131	5154	12730	12730					0.033736836775233314
IERIEKVKNKN	11	Unmodified	_IERIEKVKNKN_					0	0	0			REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9105712771416	2	685.90935	1369.80415	2.7523	0.0018878	-1.2023	-0.0008247	1.5499	0.0010631	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.0366	1	35875	35875		1.1933	0.23107	1	4137900	+		10447	15567	5132	5155	12731	12731					0.13403782334376046
IERIEKVKNKN	11	Unmodified	_IERIEKVKNKN_					0	0	0			REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9106323122978	2	685.90935	1369.80415	2.4966	0.0017124	-0.69858	-0.00047916	1.798	0.0012332	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	1.0366	1	35738	35738		1.1933	0	1	4704100	+		10448	15567	5132	5155	12732	12732					0.13403782334376046
IERIEKVKNKN	11	Unmodified	_IERIEKVKNKN_					0	0	0			REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9100829958916	2	685.90935	1369.80415	2.5108	0.0017222	-1.7161	-0.0011771	0.79471	0.0005451	685.9076374213724	85.874	0.72399	86.126	85.975	86.699	0.25227					45	23	2	0	0	0	1.0366	1	36123	36123		1.1933	0	1	1339000	+		10449	15567	5132	5155	12733	12733					0.13403782334376046
IERLNEKLWLL	11	Unmodified	_IERLNEKLWLL_					0	0	0			REV__nc|ENSG00000172456|Q96C11-4|FGGY	REV__nc|ENSG00000172456|Q96C11-4|FGGY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	714.4254638552666	2	713.924469	1425.83439	2.6006	0.0018566	1.1587	0.00082725	3.7593	0.0026838	714.4273812898335	101.33	0.093353	101.52	101.46	101.56	0.19076					4	2	2	0	0	0	1.0084	1	42609	42609		3.2813	0.28607	1	3594000	+		10450	11065	5133	5156	12734	12734					0.1385014099955697
IERQRKML	8	Unmodified	_IERQRKML_					0	0	0		nc|ENSG00000146872|Q86UE8-3|TLK2;ENSG00000146872|ENST00000346027|TLK2;nc|ENSG00000146872|Q86UE8|TLK2	nc|ENSG00000146872|Q86UE8-3|TLK2	nc|ENSG00000146872|Q86UE8-3|TLK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3177368044853	2	537.316043	1072.61753	3.1997	0.0017192	0.64452	0.00034631	3.8442	0.0020656	537.315549917304	70.759	0.60553	72.113	71.648	72.253	1.3536					32	18	3	0	0	0	0.87803	1	29742	29742		10.183	0.83596	1	3647600			10451	3167	5134	5157	12735	12735					0.08412886965015787
IERRPKLQR	9	Unmodified	_IERRPKLQR_					0	0	0		nc|ENSG00000065243|Q16513-5|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;ENSG00000065243|ENST00000370521|PKN2	nc|ENSG00000065243|Q16513-5|PKN2	nc|ENSG00000065243|Q16513-5|PKN2	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509948611259	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.471	1	15.24	14.74	15.74	0.76937								0	0	0	0.42693	1	6015	6015		1.0715	0.10919	1				10452	783	5135	5158	12736	12736					0.14134698402403956
IERRPKLQR	9	Unmodified	_IERRPKLQR_					0	0	0		nc|ENSG00000065243|Q16513-5|PKN2;nc|ENSG00000065243|Q16513-4|PKN2;nc|ENSG00000065243|Q16513-3|PKN2;nc|ENSG00000065243|Q16513-2|PKN2;ENSG00000065243|ENST00000370521|PKN2	nc|ENSG00000065243|Q16513-5|PKN2	nc|ENSG00000065243|Q16513-5|PKN2	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.34	1	116.53	116.03	117.03	0.19572								0	0	0	0.42693	1	50347	50347		0.26902	0.033176	1				10453	783	5135	5158	12737	12737					0.14134698402403956
IESFKKGV	8	Unmodified	_IESFKKGV_					0	0	0		tr|A0A553SQ29|A0A553SQ29_NIACIPseudouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_17460PE=3SV=1	tr|A0A553SQ29|A0A553SQ29_NIACIPseudouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_17460PE=3SV=1	tr|A0A553SQ29|A0A553SQ29_NIACIPseudouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_17460PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1819640994072	3	303.179766	906.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.05	1	101.12	100.62	101.62	0.067009								0	0	0	1.0178	1	42305	42305		3.5965	0	1				10454	16495	5136	5159	12738	12738					0.060469729028682195
IESLDIQFL	9	Unmodified	_IESLDIQFL_					0	0	0			REV__tr|A0A553SKW5|A0A553SKW5_NIACITranscriptionantiterminationproteinNusBOS=NialliacirculansOX=1397GN=nusBPE=3SV=1	REV__tr|A0A553SKW5|A0A553SKW5_NIACITranscriptionantiterminationproteinNusBOS=NialliacirculansOX=1397GN=nusBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.2950927615166	2	539.294965	1076.57538	1.6013	0.00086357	-2.0478	-0.0011043	-0.44647	-0.00024078	539.294485522004	68.382	0.37416	68.704	68.502	68.876	0.32224					36	11	4	0	0	0	0.10294	1	28595	28595		48.346	3.9388	1	2829500	+		10455	14970	5137	5160	12739	12739					0.04015190037625871
IESLDIQFL	9	Unmodified	_IESLDIQFL_					0	0	0			REV__tr|A0A553SKW5|A0A553SKW5_NIACITranscriptionantiterminationproteinNusBOS=NialliacirculansOX=1397GN=nusBPE=3SV=1	REV__tr|A0A553SKW5|A0A553SKW5_NIACITranscriptionantiterminationproteinNusBOS=NialliacirculansOX=1397GN=nusBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2968627810478	2	539.294965	1076.57538	1.94	0.0010462	-0.40401	-0.00021788	1.536	0.00082836	539.2946608144024	67.195	0.5184	68.584	68.343	68.861	1.3888					49	16	5	0	0	0	0.12251	1	28254	28254		41.84	1.8823	1	9442600	+		10456	14970	5137	5160	12740	12740					0.04015190037625871
IESPRRELVKW	11	Unmodified	_IESPRRELVKW_					0	0	0			REV__ENST00000594376.6_1_2:70221143-70221227:-|nuORF	REV__ENST00000594376.6_1_2:70221143-70221227:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	707.1525146365166	2	706.904068	1411.79358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.9	1	101.11	100.61	101.61	0.20527								0	0	0	0.63775	1	42426	42426		4.5289	1.2476	1		+		10457	14087	5138	5161	12741	12741					0.10415799679913107
IEVNKRKKSQI	11	Unmodified	_IEVNKRKKSQI_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2790710330009	3	448.277021	1341.80923	2.028	0.00090912	1.1085	0.00049693	3.1366	0.001406	448.2781292519799	91.017	0.37536	91.017	90.843	91.218	0					26	11	3	0	0	0	1.0388	1	38050	38050		0.50596	0	1	753280	+		10458	9272	5139	5162	12742	12742					0.15200086197000928
IEVNKRKKSQI	11	Unmodified	_IEVNKRKKSQI_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	448.277021	1341.80923	2.028	0.00090912	1.1085	0.00049693	3.1366	0.001406	448.2781292519799	91.017	0.37536	91.017	90.843	91.218	0	-0.12801	0.00073112	NaN	0.50596	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	753280	+		10459	9272	5139	5162							0.15200086197000928
IEVNKRKKSQI	11	Unmodified	_IEVNKRKKSQI_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	448.277021	1341.80923	4.7602	0.0021339	-0.064908	-2.9097E-05	4.6953	0.0021048	448.27770730317354	90.228	0.38356	91.248	91.022	91.405	1.0199	0.10346	-0.00084694	NaN	0.50596	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384290	+		10460	9272	5139	5162							0.15200086197000928
IEVNKRKKSQI	11	Unmodified	_IEVNKRKKSQI_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	448.277021	1341.80923	4.4466	0.0019933	0.23779	0.0001066	4.6843	0.0020999	448.61105024432254	89.82	0.31794	91.225	91.113	91.431	1.4045	0.080073	-0.00043987	NaN	0.50596	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	726520	+		10461	9272	5139	5162							0.15200086197000928
IEWIIILILHK	11	Unmodified	_IEWIIILILHK_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000463793.1_1_1:234546169-234556549:-|nuORF;TARBP1|p.V1274Dfs*15|1|0.03|ENSG00000059588|chr1:234406071-234406072|-/GATGAAAAAT|frameshift_variant	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.4765197634697	4	348.475975	1389.87479	0.77962	0.00027168	0.26263	9.1521E-05	1.0423	0.0003632	348.4760796759304	30.759	0.97569	31.045	30.469	31.444	0.2859					88	32	3	0	0	0	1.0391	1	13051	13051		0.40827	0.26837	1	3326500			10462	740	5140	5163	12743	12743					0.19545107390013072
IEWIIILILHK	11	Unmodified	_IEWIIILILHK_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000463793.1_1_1:234546169-234556549:-|nuORF;TARBP1|p.V1274Dfs*15|1|0.03|ENSG00000059588|chr1:234406071-234406072|-/GATGAAAAAT|frameshift_variant	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.7272521853447	4	348.475975	1389.87479	0.81233	0.00028308	-0.1707	-5.9486E-05	0.64163	0.00022359	348.47612365679896	31.311	0.51455	31.602	31.449	31.964	0.29086					41	16	3	0	0	0	1.0391	2	13115	13115;13167		0.40827	0.26837	1	1940000			10463	740	5140	5163	12744;12745	12744					0.19545107390013072
IEWIIILILHK	11	Unmodified	_IEWIIILILHK_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000463793.1_1_1:234546169-234556549:-|nuORF;TARBP1|p.V1274Dfs*15|1|0.03|ENSG00000059588|chr1:234406071-234406072|-/GATGAAAAAT|frameshift_variant	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.4761230349541	4	348.475975	1389.87479	0.32226	0.0001123	0.29139	0.00010154	0.61365	0.00021384	348.4760079941895	29.243	1.058	31.042	30.206	31.264	1.7987					97	34	4	0	0	0	1.0369	1	12254	12254		1.1098	0.48293	1	4132000			10464	740	5140	5163	12746	12746					0.19545107390013072
IEWIIILILHK	11	Unmodified	_IEWIIILILHK_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000463793.1_1_1:234546169-234556549:-|nuORF;TARBP1|p.V1274Dfs*15|1|0.03|ENSG00000059588|chr1:234406071-234406072|-/GATGAAAAAT|frameshift_variant	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.4753295779228	4	348.475975	1389.87479	0.34436	0.00012	-0.76023	-0.00026492	-0.41587	-0.00014492	348.47586219992024	29.662	0.36464	31.461	31.234	31.598	1.7987					27	11	3	0	0	0	1.039	1	12439	12439		0.45452	0.31463	1	3354200			10465	740	5140	5163	12747	12747					0.19545107390013072
IEWIIILILHK	11	Unmodified	_IEWIIILILHK_					0	0	0		ENSG00000059588|ENST00000040877|TARBP1;ENST00000463793.1_1_1:234546169-234556549:-|nuORF;TARBP1|p.V1274Dfs*15|1|0.03|ENSG00000059588|chr1:234406071-234406072|-/GATGAAAAAT|frameshift_variant	ENSG00000059588|ENST00000040877|TARBP1	ENSG00000059588|ENST00000040877|TARBP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	348.475975	1389.87479	0.34436	0.00012	-0.76023	-0.00026492	-0.41587	-0.00014492	348.47586219992024	29.662	0.36464	31.461	31.234	31.598	1.7987	-0.070795	-0.0004087	NaN	0.45452	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3354200			10466	740	5140	5163							0.19545107390013072
IEWRCVII	8	Unmodified	_IEWRCVII_					0	0	0		nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9;ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000177200|Q3L8U1-2|CHD9;ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.3762695193291	2	516.288963	1030.56337	4.4078	0.0022757	4.3701	0.0022562	8.7779	0.0045319	516.2916804556503	93.338	0.22505	94.21	94.128	94.353	0.87176					11	6	2	0	0	0	2.3239	1	39278	39278		2.5775	0.92486	1	657270			10467	1308;4440	5141	5164	12748	12748					0.04931294813445675
IEWRCVII	8	Unmodified	_IEWRCVII_					0	0	0		nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9;ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF;ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	nc|ENSG00000177200|Q3L8U1-2|CHD9;ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	516.288963	1030.56337	3.4807	0.001797	3.7304	0.001926	7.2111	0.003723	516.2911151226627	92.881	0.2216	94.158	94.07	94.292	1.277	-0.025858	-0.00022037	NaN	2.5775	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366680			10468	1308;4440	5141	5164							0.04931294813445675
IEWRLRKEQIK	11	Unmodified	_IEWRLRKEQIK_					0	0	0		ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2;ENST00000517941.1_1_5:167653258-167667917:+|nuORF	ENSG00000145934|ENST00000518659|TENM2	ENSG00000145934|ENST00000518659|TENM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	749.9138671755791	2	749.946267	1497.87798	2.4662	0.0018495	-2.1204	-0.0015902	0.34585	0.00025937	749.9449857258267	117.08	0.12914	117.29	117.18	117.31	0.21096					5	3	2	0	0	0	1.0362	1	50620	50620		1.3295	0	1	675730			10469	3130	5142	5165	12749	12749					0.1489575049670293
IEYIKSIRF	9	Unmodified	_IEYIKSIRF_					0	0	0		tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	390.2295410037041	3	390.229008	1167.66519	1.1549	0.00045069	0.34792	0.00013577	1.5029	0.00058646	390.22913634540225	48.024	1.4907	49.412	49.241	50.731	1.388					105	47	3	0	0	0	0.32838	1	20067	20067		17.443	0.39407	1	13696000			10470	16832	5143	5166	12750	12750					0.08806864436837714
IEYIKSIRF	9	Unmodified	_IEYIKSIRF_					0	0	0		tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	tr|A0A7D6VRK4|A0A7D6VRK4_9CLOTDNAligaseOS=ClostridiumintestinaleOX=36845GN=ligAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	390.2291747927666	3	390.229008	1167.66519	2.2584	0.00088131	-0.63688	-0.00024853	1.6215	0.00063277	390.22892260138923	47.165	1.8288	49.141	48.87	50.699	1.976					205	58	5	0	0	0	0.32838	1	20013	20013		17.443	0	1	110590000			10471	16832	5143	5166	12751	12751					0.08806864436837714
IFADMQGFTF	10	Unmodified	_IFADMQGFTF_					0	0	0		nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A;ENSG00000169894|ENST00000379458|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7714111208916	2	588.773342	1175.53213	3.8958	0.0022938	-1.9451	-0.0011452	1.9508	0.0011486	588.7716845384299	82.281	0.28522	83.493	83.349	83.634	1.2125					19	8	3	0	0	0	0.22411	2	34523	34523;34574		46.021	25.606	1	1877200			10472	4117	5144	5167	12752;12753	12752					-0.04861323011323293
IFADMQGFTF	10	Unmodified	_IFADMQGFTF_					0	0	0		nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A;ENSG00000169894|ENST00000379458|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7733642458916	2	588.773342	1175.53213	3.9181	0.0023069	-4.1134	-0.0024218	-0.19525	-0.00011496	588.7699669135286	81.842	0.31365	83.512	83.326	83.639	1.67					21	9	3	0	0	0	0.41677	1	34336	34336		32.305	16.458	1	1194900			10473	4117	5144	5167	12754	12754					-0.04861323011323293
IFATLDLAMI	10	Unmodified	_IFATLDLAMI_					0	0	0		tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.3079711794853	2	554.309561	1106.60457	1.3733	0.00076123	-3.0385	-0.0016843	-1.6652	-0.00092306	554.3072563999274	76.319	0.3643	76.319	76.164	76.529	0					29	11	3	0	0	0	0.38674	1	31799	31799		34.102	5.0209	1	3467000			10474	16149	5145	5168	12755	12755					0.05553011062261248
IFATLDLAMI	10	Unmodified	_IFATLDLAMI_					0	0	0		tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3125488162041	2	554.309561	1106.60457	3.0739	0.0017039	0.061123	3.3881E-05	3.1351	0.0017378	554.3102390044436	74.768	0.46422	76.074	75.847	76.311	1.3063					41	14	4	0	0	0	0.18471	1	31384	31384		50.855	2.5092	1	7922200			10475	16149	5145	5168	12756	12756					0.05553011062261248
IFATLDLAMI	10	Unmodified	_IFATLDLAMI_					0	0	0		tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	tr|A0A553SHF9|A0A553SHF9_NIACIStageIIsporulationproteinEOS=NialliacirculansOX=1397GN=spoIIEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3114501833916	2	554.309561	1106.60457	2.8795	0.0015961	-0.17441	-9.6677E-05	2.7051	0.0014995	554.3102728295421	74.28	0.40559	76.076	75.869	76.275	1.7962					36	12	4	0	0	0	0.25611	1	31172	31172		42.095	2.1372	1	6686200			10476	16149	5145	5168	12757	12757					0.05553011062261248
IFATWYGAI	9	Unmodified	_IFATWYGAI_					0	0	0			REV__tr|A0A7D6W189|A0A7D6W189_9CLOTCarotenoidbiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02810PE=4SV=1	REV__tr|A0A7D6W189|A0A7D6W189_9CLOTCarotenoidbiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02810PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.7325927615166	2	521.273835	1040.53312	1.9653	0.0010245	0.88825	0.00046302	2.8535	0.0014875	521.2740739616031	80.653	0.36694	82.349	82.18	82.547	1.6959					18	11	2	0	0	0	0.11109	1	33795	33795		9.3474	0	1	1817300	+		10477	15588	5146	5169	12758	12758					0.014472594198878141
IFDMVRRF	8	Unmodified	_IFDMVRRF_					0	0	0			REV__SHMT2|p.V445M|1|0.06|ENSG00000182199|chr12:57234056-57234056|G/A|missense_variant	REV__SHMT2|p.V445M|1|0.06|ENSG00000182199|chr12:57234056-57234056|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.8366577029228	2	542.292037	1082.56952	5.648	0.0030629	-0.8428	-0.00045704	4.8052	0.0026058	542.2911121687767	89.05	0.25644	90.106	89.951	90.207	1.0562					10	6	3	0	0	0	2.3239	1	37562	37562		8.5933	0	1	675510	+		10478	14620	5147	5170	12759	12759					0.03153813044968956
IFEDSILNF	9	Unmodified	_IFEDSILNF_					0	0	0			REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2810546755791	2	549.279315	1096.54408	2.5599	0.0014061	0.72315	0.00039721	3.283	0.0018033	549.2794174132085	79.013	0.53195	80.28	79.939	80.471	1.2668					32	16	3	0	0	0	0.1735	1	33173	33173		36.044	3.7387	1	1342200	+		10479	15469	5148	5171	12760	12760					-0.0003338299648021348
IFEDSILNF	9	Unmodified	_IFEDSILNF_					0	0	0			REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	549.279315	1096.54408	2.5599	0.0014061	0.72315	0.00039721	3.283	0.0018033	549.2794174132085	79.013	0.53195	80.28	79.939	80.471	1.2668	-0.0097312	0.00053956	NaN	36.044	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1342200	+		10480	15469	5148	5171							-0.0003338299648021348
IFEDSILNF	9	Unmodified	_IFEDSILNF_					0	0	0			REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	REV__tr|A0A7D6VT22|A0A7D6VT22_9CLOTOligosacchariderepeatunitpolymeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18900PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.279315	1096.54408	2.2743	0.0012492	-0.51779	-0.00028441	1.7565	0.0009648	549.2788723950256	78.564	0.52731	80.299	79.948	80.475	1.735	0.0097312	-0.00082368	NaN	36.044	29	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2067500	+		10481	15469	5148	5171							-0.0003338299648021348
IFEFFRRL	8	Unmodified	_IFEFFRRL_					0	0	0			REV__tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	REV__tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	563.7448608279228	2	564.321651	1126.62875	2.5033	0.0014127	0.87734	0.0004951	3.3807	0.0019078	564.3218965097886	84.577	0.12357	86.173	86.064	86.188	1.5962					6	3	2	0	0	0	2.3239	1	35430	35430		6.3541	0	1	282800	+		10482	14884	5149	5172	12761	12761					0.07050032330812428
IFEIFYLTF	9	Unmodified	_IFEIFYLTF_					0	0	0			REV__L1P2_dup554|chr5:118974817-118975709:-|1.3792945865888482|0.1408758943517007|3.29|429.0|30|1|anti-sense	REV__L1P2_dup554|chr5:118974817-118975709:-|1.3792945865888482|0.1408758943517007|3.29|429.0|30|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	596.2795287966728	2	596.818076	1191.6216	3.5881	0.0021414	-2.0964	-0.0012511	1.4917	0.0008903	596.8163285666652	82.487	0.32082	83.699	83.505	83.826	1.2125					14	9	2	0	0	0	0.11333	1	34560	34560		13.508	0.97634	1	1323600	+		10483	14289	5150	5173	12762	12762					0.03345254939699771
IFEKLEKL	8	Unmodified	_IFEKLEKL_					0	0	0			REV__nc|ENSG00000084112|Q8WYL5-2|SSH1	REV__nc|ENSG00000084112|Q8WYL5-2|SSH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8047973513603	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.88055	1	28421	28421		8.5933	0	1	98417000	+		10484	8840	5151	5174	12763	12763					0.09772388142516775
IFEMLQERQP	10	Unmodified	_IFEMLQERQP_					0	0	0		nc|ENSG00000002746|Q76N89-2|HECW1;ENSG00000002746|ENST00000395891|HECW1	nc|ENSG00000002746|Q76N89-2|HECW1	nc|ENSG00000002746|Q76N89-2|HECW1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880493044853	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.069	1	36.887	36.387	37.387	1.8176								0	0	0	0.66222	1	14704	14704		0.69767	0.19171	1				10485	461	5152	5175	12764	12764					0.010571113458127002
IFFENHPYF	9	Unmodified	_IFFENHPYF_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2885619997978	2	607.287474	1212.5604	2.4441	0.0014843	-0.45826	-0.00027829	1.9858	0.001206	607.2870127626244	59.523	0.46786	60.942	60.769	61.236	1.4196					44	14	4	0	0	0	0.022807	3	24977	24932;24977;25034		97.075	53.216	1	7697000			10486	3476	5153	5176	12765;12766;12767	12766					-0.03738257039731252
IFFENHPYF	9	Unmodified	_IFFENHPYF_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2889282107353	2	607.287474	1212.5604	2.5166	0.0015283	-0.61184	-0.00037156	1.9048	0.0011568	607.2868405615633	59.103	0.41203	61.072	60.844	61.256	1.969					39	12	4	0	0	0	0.022807	3	24803	24756;24803;24849		97.075	53.216	1	6963500			10487	3476	5153	5176	12768;12769;12770	12769					-0.03738257039731252
IFFGGLVFKF	10	Unmodified	_IFFGGLVFKF_					0	0	0		ENST00000480937.5_1_1:25666968-25687193:+|nuORF;ENSG00000183726|ENST00000374358|TMEM50A	ENST00000480937.5_1_1:25666968-25687193:+|nuORF	ENST00000480937.5_1_1:25666968-25687193:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8389770388603	2	587.836603	1173.65865	4.175	0.0024542	0.13119	7.7118E-05	4.3062	0.0025313	587.8368520173262	91.884	0.37302	92.82	92.678	93.051	0.93624					25	11	3	0	0	0	0.19223	2	38732	38683;38732		49.933	21.446	1	1659600			10488	4661	5154	5177	12771;12772	12772					0.07876971276095901
IFFGGLVFKF	10	Unmodified	_IFFGGLVFKF_					0	0	0		ENST00000480937.5_1_1:25666968-25687193:+|nuORF;ENSG00000183726|ENST00000374358|TMEM50A	ENST00000480937.5_1_1:25666968-25687193:+|nuORF	ENST00000480937.5_1_1:25666968-25687193:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8405029177666	2	587.836603	1173.65865	3.2772	0.0019265	2.4247	0.0014253	5.7019	0.0033518	587.8370785220253	91.454	0.46176	92.82	92.566	93.028	1.366					18	14	2	0	0	0	0.19223	1	38516	38516		49.933	19.708	1	1413300			10489	4661	5154	5177	12773	12773					0.07876971276095901
IFGAALFAL	9	Unmodified	_IFGAALFAL_					0	0	0			REV__tr|A0A553SI74|A0A553SI74_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14325PE=3SV=1	REV__tr|A0A553SI74|A0A553SI74_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	922.5320922732353	1	922.539666	921.53239	2.7751	0.0025601	0.64462	0.00059469	3.4197	0.0031548	922.5411626632622	96.739	0.1888	96.844	96.785	96.974	0.105					6	5	2	0	0	0	0.16975	1	40475	40475		36.466	6.2678	1	1394700	+		10490	14839	5155	5178	12774	12774					0.0684846477084875
IFGLLYNIL	9	Unmodified	_IFGLLYNIL_					0	0	0			REV__tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	REV__tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1931640505791	2	533.320786	1064.62702	4.9158	0.0026217	-0.81789	-0.0004362	4.0979	0.0021855	533.3200897062726	87.352	0.40693	88.847	88.703	89.11	1.4953					21	12	3	0	0	0	0.116	1	36871	36871		5.2307	0	1	1165000	+		10491	15612	5156	5179	12775	12775					0.09728978522161924
IFGVIIDTF	9	Unmodified	_IFGVIIDTF_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	ENSG00000096433|ENST00000605930|ITPR3;ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7918578982353	2	512.789318	1023.56408	4.4475	0.0022806	-0.16748	-8.5883E-05	4.28	0.0021948	512.7894772917847	90.674	0.51185	91.655	91.398	91.91	0.98157					33	15	3	0	0	0	0.037423	3	38196	38151;38196;38254		78.445	28.776	1	3023900			10492	2180;1195	5157	5180	12776;12777;12778	12777					0.053244127341372405
IFGVIIDTF	9	Unmodified	_IFGVIIDTF_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	ENSG00000096433|ENST00000605930|ITPR3;ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1024.577441394329	1	1024.57136	1023.56408	3.5171	0.0036035	2.5023	0.0025638	6.0195	0.0061674	1024.5736582691768	90.656	0.51215	91.638	91.43	91.942	0.98157					32	15	3	0	0	0	0.02596	3	38159	38159;38210;38268		93.883	40.308	1	7372400			10493	2180;1195	5157	5180	12779;12780;12781	12779					0.053244127341372405
IFGVIIDTF	9	Unmodified	_IFGVIIDTF_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	ENSG00000096433|ENST00000605930|ITPR3;ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7925903201103	2	512.789318	1023.56408	4.4299	0.0022716	0.59501	0.00030511	5.0249	0.0025767	512.7896708190095	90.194	0.50225	91.598	91.4	91.903	1.4045					38	15	4	0	0	0	0.030843	3	37972	37972;38024;38083		86.121	36.452	1	3961500			10494	2180;1195	5157	5180	12782;12783;12784	12782					0.053244127341372405
IFGVIIDTF	9	Unmodified	_IFGVIIDTF_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1	ENSG00000096433|ENST00000605930|ITPR3;ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1024.576342761517	1	1024.57136	1023.56408	4.3053	0.0044111	1.1686	0.0011973	5.4739	0.0056084	1024.5728548023963	90.208	0.40549	91.613	91.4	91.806	1.4044					30	12	3	0	0	0	0.010702	2	37996	37996;38035		106.85	43.283	1	6365300			10495	2180;1195	5157	5180	12785;12786	12785					0.053244127341372405
IFHEVPLKF	9	Unmodified	_IFHEVPLKF_					0	0	0		ENSG00000128915|ENST00000261520|ICE2;ENST00000483823.1_1_3:88997907-88998639:+|nuORF	ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2194702029228	3	377.218332	1128.63317	1.1942	0.00045046	-0.025747	-9.7123E-06	1.1684	0.00044075	377.21875136428406	45.623	0.34808	46.998	46.768	47.116	1.3751					24	10	3	0	0	0	0.099383	1	19082	19082		49.527	26.869	1	2652800			10496	2389	5158	5181	12787	12787					0.07399496753691892
IFHEVPLKF	9	Unmodified	_IFHEVPLKF_					0	0	0		ENSG00000128915|ENST00000261520|ICE2;ENST00000483823.1_1_3:88997907-88998639:+|nuORF	ENSG00000128915|ENST00000261520|ICE2	ENSG00000128915|ENST00000261520|ICE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2194091677666	3	377.218332	1128.63317	1.4939	0.00056352	-0.067007	-2.5276E-05	1.4269	0.00053825	377.21854716670134	45.061	0.34524	47.02	46.831	47.176	1.9596					24	10	3	0	0	0	0.22094	2	18878	18878;18919		30.703	18.529	1	2208100			10497	2389	5158	5181	12788;12789	12788					0.07399496753691892
IFHIKLILH	9	Unmodified	_IFHIKLILH_					0	0	0			REV__chr1:221918712-221976287|206|38.49|0.18|7.74|-|2|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|16	REV__chr1:221918712-221976287|206|38.49|0.18|7.74|-|2|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5789367556572	3	378.577972	1132.71209	1.0692	0.00040476	1.8222	0.00068984	2.8913	0.0010946	378.5787845962251	30.785	1.2845	31.071	30.674	31.959	0.2859					126	42	5	0	0	0	0.85206	2	12791	12791;12838		0.26902	0	1	107130000	+		10498	8217	5159	5182	12790;12791	12790					0.15103768778658377
IFHIKLILH	9	Unmodified	_IFHIKLILH_					0	0	0			REV__chr1:221918712-221976287|206|38.49|0.18|7.74|-|2|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|16	REV__chr1:221918712-221976287|206|38.49|0.18|7.74|-|2|TE_info:HERVH-int,HERVH-int_dup364,ERV1,LTR,donor,-,221976287,221978506|LINC02257,None|16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5785400271416	3	378.577972	1132.71209	0.50186	0.00018999	1.6123	0.00061038	2.1142	0.00080037	378.5788022668036	28.964	0.753	30.763	30.298	31.051	1.7987					82	24	6	0	0	0	0.85206	1	12032	12032		0.26902	0	1	143200000	+		10499	8217	5159	5182	12792	12792					0.15103768778658377
IFHLWRCKKYR	11	Unmodified	_IFHLWRCKKYR_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6262695193291	3	517.290607	1548.84999	2.1937	0.0011348	-1.0113	-0.00052315	1.1824	0.00061163	517.6239096368689	52.824	1.495	52.824	51.756	53.251	0					97	48	3	0	0	0	1.0362	1	21798	21798		1.3296	0.11481	1	2569700			10500	2378	5160	5183	12793	12793					0.09752149035602997
IFHLWRCKKYR	11	Unmodified	_IFHLWRCKKYR_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6285888552666	3	517.290607	1548.84999	2.2757	0.0011772	2.7682	0.001432	5.0439	0.0026092	517.291798434614	41.681	4.8489	43.007	41.771	46.62	1.3254					319	154	4	0	0	0	1.0357	1	17289	17289		1.4551	0.24029	1	12100000			10501	2378	5160	5183	12794	12794					0.09752149035602997
IFHLWRCKKYR	11	Unmodified	_IFHLWRCKKYR_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2942993044853	3	517.290607	1548.84999	2.4658	0.0012755	0.53345	0.00027595	2.9993	0.0015515	517.2930720366364	50.53	1.1778	51.924	51.169	52.346	1.3938					80	37	3	0	0	0	1.0357	1	21073	21073		1.4551	0	1	3806500			10502	2378	5160	5183	12795	12795					0.09752149035602997
IFHLWRCKKYR	11	Unmodified	_IFHLWRCKKYR_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6263915896416	3	517.290607	1548.84999	3.0709	0.0015885	0.68186	0.00035272	3.7527	0.0019412	517.6248844590943	59.925	2.5477	61.344	60.35	62.898	1.4196					133	82	3	0	0	0	1.0362	1	25552	25552		1.3296	0	1	2544800			10503	2378	5160	5183	12796	12796					0.09752149035602997
IFIDEIDSF	9	Unmodified	_IFIDEIDSF_					0	0	0		nc|ENSG00000138138|Q8NBU5-2|ATAD1;ENSG00000138138|ENST00000680024|ATAD1	nc|ENSG00000138138|Q8NBU5-2|ATAD1	nc|ENSG00000138138|Q8NBU5-2|ATAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7726928591728	2	549.771322	1097.52809	1.408	0.0007741	1.4155	0.0007782	2.8235	0.0015523	549.7715469987262	77.77	0.33394	79.522	79.35	79.684	1.7514					29	10	4	0	0	0	0.087207	1	32632	32632		53.576	23.351	1	3239000			10504	2817	5161	5184	12797	12797					-0.016770892333852316
IFIDKIYSI	9	Unmodified	_IFIDKIYSI_					0	0	0		nc|ENSG00000168116|Q9HCI6-2|KIAA1586;ENSG00000168116|ENST00000370733|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3238403201103	2	556.323525	1110.6325	2.9242	0.0016268	-1.1861	-0.00065987	1.7381	0.00096694	556.3228441343516	63.074	0.34241	64.487	64.284	64.626	1.4134					25	10	3	0	0	0	0.043696	2	26475	26425;26475		72.968	29.11	1	4292600			10505	4017	5162	5185	12798;12799	12799					0.0816065731398794
IFIDKIYSI	9	Unmodified	_IFIDKIYSI_					0	0	0		nc|ENSG00000168116|Q9HCI6-2|KIAA1586;ENSG00000168116|ENST00000370733|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	nc|ENSG00000168116|Q9HCI6-2|KIAA1586	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.3244506716728	2	556.323525	1110.6325	2.8453	0.0015829	-0.42124	-0.00023434	2.4241	0.0013486	556.3233258233859	62.479	0.34244	64.424	64.254	64.597	1.9444					31	10	4	0	0	0	0.026734	2	26248	26201;26248		92.653	44.307	1	4568800			10506	4017	5162	5185	12800;12801	12801					0.0816065731398794
IFIDPGYQTF	10	Unmodified	_IFIDPGYQTF_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8023559451103	2	600.800414	1199.58628	1.9809	0.0011901	0.81889	0.00049199	2.7997	0.0016821	600.8006845517689	69.18	0.41198	70.546	70.317	70.729	1.3657					50	13	5	0	0	0	0.062288	3	28995	28995;29045;29101		96.367	42.534	1	17910000			10507	2138	5163	5186	12802;12803;12804	12802					-0.005534075881087119
IFIDPGYQTF	10	Unmodified	_IFIDPGYQTF_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8010742068291	2	600.800414	1199.58628	1.6373	0.0009837	0.23729	0.00014256	1.8746	0.0011263	600.8006404849623	68.689	0.42384	70.542	70.313	70.737	1.853					37	13	3	0	0	0	0.043952	3	28848	28752;28796;28848		106.94	45.338	1	25501000			10508	2138	5163	5186	12805;12806;12807	12807					-0.005534075881087119
IFIEKDKEKL	10	Unmodified	_IFIEKDKEKL_					0	0	0			REV__tr|A0A7D6VU54|A0A7D6VU54_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_05780PE=3SV=1	REV__tr|A0A7D6VU54|A0A7D6VU54_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_05780PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.9184753298759	3	421.583339	1261.72819	0.98688	0.00041605	0.98658	0.00041592	1.9735	0.00083198	421.91810379765093	54.611	0.22289	54.611	54.502	54.725	0					11	6	2	0	0	0	0.83036	1	22766	22766		8.9762	0.53194	1	802210	+		10509	15510	5164	5187	12808	12808					0.10779385434238975
IFIFALRQL	9	Unmodified	_IFIFALRQL_					0	0	0			REV__ENST00000396299.6_1_7:28858911-28859157:+|nuORF	REV__ENST00000396299.6_1_7:28858911-28859157:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8484374880791	2	560.847502	1119.68045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.168	1	49.556	49.056	50.056	1.388								0	0	0	0.317	1	20163	20163		16.942	3.0362	1		+		10510	12844	5165	5188	12809	12809					0.12539776024686944
IFIIEEKNL	9	Unmodified	_IFIIEEKNL_					0	0	0			REV__ENST00000554908.5_1_14:54944592-54944661:-|nuORF	REV__ENST00000554908.5_1_14:54944592-54944661:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.8273803591728	2	559.826432	1117.63831	1.6914	0.00094692	0.87451	0.00048957	2.566	0.0014365	559.826692974592	61.365	0.31515	61.365	61.172	61.487	0					17	9	2	0	0	0	0.20244	1	25585	25585		32.786	2.9451	1	1038100	+		10511	13862	5166	5189	12810	12810					0.08419755825661923
IFIIEEKNL	9	Unmodified	_IFIIEEKNL_					0	0	0			REV__ENST00000554908.5_1_14:54944592-54944661:-|nuORF	REV__ENST00000554908.5_1_14:54944592-54944661:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	559.2822143435478	2	559.826432	1117.63831	2.5377	0.0014207	0.41859	0.00023434	2.9563	0.001655	559.8264335811195	59.461	0.46728	60.881	60.678	61.146	1.4196					30	14	3	0	0	0	0.11071	1	25036	25036		10.824	1.4408	1	3780200	+		10512	13862	5166	5189	12811	12811					0.08419755825661923
IFILRKKH	8	Unmodified	_IFILRKKH_					0	0	0		tr|A0A7D6VQS4|A0A7D6VQS4_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22470PE=4SV=1	tr|A0A7D6VQS4|A0A7D6VQS4_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22470PE=4SV=1	tr|A0A7D6VQS4|A0A7D6VQS4_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22470PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	352.2348815798759	3	352.234316	1053.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.841	1	100.04	99.539	100.54	0.19767								0	0	0	1.0178	1	42025	42025		0.40072	0.1317	1				10513	16807	5167	5190	12812	12812					0.15642615464412302
IFIMPTVVV	9	Unmodified	_IFIMPTVVV_					0	0	0		ENST00000431261.6_1_15:65897563-65899763:-|nuORF;ENST00000564306.5_1_15:65892084-65903486:-|nuORF	ENST00000431261.6_1_15:65897563-65899763:-|nuORF	ENST00000431261.6_1_15:65897563-65899763:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8041869997978	2	509.803914	1017.59328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.432	1	68.432	67.932	68.932	0								0	0	0	0.40188	1	28499	28499		8.5933	0	1				10514	6500	5168	5191	12813	12813					0.08518233758775295
IFIQNSKLYF	10	Unmodified	_IFIQNSKLYF_					0	0	0		ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.8542358279228	2	636.852981	1271.69141	2.1169	0.0013482	0.50766	0.00032331	2.6246	0.0016715	636.8535004523477	59.585	0.31496	61.005	60.831	61.146	1.4196					21	9	3	0	0	0	0.078293	2	25010	24957;25010		67.838	31.332	1	1679900			10515	2833	5169	5192	12814;12815	12815					0.06643133608326934
IFIQNSKLYF	10	Unmodified	_IFIQNSKLYF_					0	0	0		ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	ENSG00000138459|ENST00000492406|SLC35A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.8547851443291	2	636.852981	1271.69141	2.1374	0.0013612	1.7204	0.0010957	3.8578	0.0024569	636.8538665242372	59.113	0.28506	61.082	60.94	61.225	1.969					17	8	3	0	0	0	0.045213	1	24810	24810		83.429	46.923	1	1618500			10516	2833	5169	5192	12816	12816					0.06643133608326934
IFKKKKRA	8	Unmodified	_IFKKKKRA_					0	0	0			REV__tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	REV__tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.2325927615166	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.49	1	64.49	63.99	64.99	0								0	0	0	1.0178	1	26884	26884		0.40072	0	1		+		10517	15467	5170	5193	12817	12817					0.1729861546440361
IFKKKKRA	8	Unmodified	_IFKKKKRA_					0	0	0			REV__tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	REV__tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2333557009697	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.647	1	62.976	62.476	63.476	0.32974								0	0	0	1.0178	1	26247	26247		0.40072	0	1		+		10518	15467	5170	5193	12818	12818					0.1729861546440361
IFKKREIKRRF	11	Unmodified	_IFKKREIKRRF_					0	0	0			REV__nc|ENSG00000241356|P0C626|OR5G3	REV__nc|ENSG00000241356|P0C626|OR5G3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2491332888603	5	304.996544	1519.94634	-2.3288	-0.00071028	-0.2796	-8.5278E-05	-2.6084	-0.00079556	304.9966494047793	39.995	0.5116	39.995	39.82	40.331	0					23	15	2	0	0	0	0.14606	1	16764	16764		0	0	1	741410	+		10519	14548	5171	5194	12819	12819					0.20716039867170366
IFKPPDPDNTF	11	Unmodified	_IFKPPDPDNTF_					0	0	0		MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant;ENSG00000165943|ENST00000298894|MOAP1	MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant	MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.8237792849541	2	645.821878	1289.6292	1.3627	0.00088003	-0.15971	-0.00010315	1.2029	0.00077688	645.8220523528338	43.315	0.54203	44.668	44.344	44.886	1.3536					40	17	4	0	0	0	0.022207	3	18174	18072;18121;18174		97.741	59.565	1	2780900			10520	3870	5172	5195	12820;12821;12822	12822					-0.004026375306921182
IFKPPDPDNTF	11	Unmodified	_IFKPPDPDNTF_					0	0	0		MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant;ENSG00000165943|ENST00000298894|MOAP1	MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant	MOAP1|p.L150Cfs*8|1|0.17|ENSG00000165943|chr14:93183780-93183796|GCTGAAGAGCCTCTAAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.8240234255791	2	645.821878	1289.6292	1.7255	0.0011144	0.82878	0.00053525	2.5543	0.0016496	645.822310996328	42.648	0.58185	44.569	44.258	44.84	1.9211					41	18	3	0	0	0	0.026551	3	17848	17795;17848;17897		91.085	59.816	1	2357900			10521	3870	5172	5195	12823;12824;12825	12824					-0.004026375306921182
IFKVQLRA	8	Unmodified	_IFKVQLRA_					0	0	0		tr|A0A7D6VQH6|A0A7D6VQH6_9CLOTPhosphoenolpyruvate-proteinphosphotransferaseOS=ClostridiumintestinaleOX=36845GN=ptsPPE=3SV=1	tr|A0A7D6VQH6|A0A7D6VQH6_9CLOTPhosphoenolpyruvate-proteinphosphotransferaseOS=ClostridiumintestinaleOX=36845GN=ptsPPE=3SV=1	tr|A0A7D6VQH6|A0A7D6VQH6_9CLOTPhosphoenolpyruvate-proteinphosphotransferaseOS=ClostridiumintestinaleOX=36845GN=ptsPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.8116027712822	2	487.810919	973.607286	4.6854	0.0022856	-2.8125	-0.0013719	1.873	0.00091367	487.8093941898909	88.205	0.38309	89.652	89.348	89.731	1.4467					20	11	2	0	0	0	0.89051	1	37157	37157		2.3027	0	1	1574600			10522	16797	5173	5196	12826	12826					0.11942647302066689
IFKVRNINIF	10	Unmodified	_IFKVRNINIF_					0	0	0		ENST00000577307.1_1_17:33269786-33269990:-|nuORF	ENST00000577307.1_1_17:33269786-33269990:-|nuORF	ENST00000577307.1_1_17:33269786-33269990:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.9254638552666	3	421.923919	1262.74993	1.6044	0.00067694	0.93786	0.00039571	2.5423	0.0010726	421.9244388642927	50.668	0.21148	52.062	51.986	52.197	1.3938					12	6	3	0	0	0	0.85617	1	21216	21216		6.1918	0.78914	1	561060			10523	7416	5174	5197	12827	12827					0.1290623497343404
IFKVRNINIF	10	Unmodified	_IFKVRNINIF_					0	0	0		ENST00000577307.1_1_17:33269786-33269990:-|nuORF	ENST00000577307.1_1_17:33269786-33269990:-|nuORF	ENST00000577307.1_1_17:33269786-33269990:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	421.9256774783134	3	421.923919	1262.74993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.01	1	51.987	51.487	52.487	1.9772								0	0	0	0.65895	1	20946	20946		6.1918	0.78914	1				10524	7416	5174	5197	12828	12828					0.1290623497343404
IFLKLFKLIR	10	Unmodified	_IFLKLFKLIR_					0	0	0			REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	323.4728271365166	4	323.471964	1289.85875	-0.072529	-2.3461E-05	1.6528	0.00053465	1.5803	0.00051119	323.4725391582318	23.418	1.2518	25.069	24.56	25.812	1.6511					124	40	5	0	0	0	0.89803	5	9619	9619;9664;9720;9768;9806		0	0	1	29563000	+		10525	13808	5175	5198	12829;12830;12831;12832;12833	12829					0.22541445943738836
IFLKLFKLIR	10	Unmodified	_IFLKLFKLIR_					0	0	0			REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.960193	1289.85875	0.6799	0.00029301	0.6217	0.00026793	1.3016	0.00056094	430.9599316209052	25.358	0.15336	27.074	26.936	27.089	1.7167					7	4	2	0	0	0	0.12561	1	10571	10571		0	0	1	767480	+		10526	13808	5175	5198	12834	12834					0.22541445943738836
IFLKLFKLIR	10	Unmodified	_IFLKLFKLIR_					0	0	0			REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	REV__ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	430.960193	1289.85875	0.49744	0.00021438	2.1892	0.00094344	2.6866	0.0011578	430.96106812773803	27.306	0.33647	27.306	27.014	27.35	0	0.11381	0.0006164	NaN	0	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2174400	+		10527	13808	5175	5198							0.22541445943738836
IFLLMGKWLT	10	Unmodified	_IFLLMGKWLT_					0	0	0			REV__ENSG00000261587|ENST00000696146|TMEM249	REV__ENSG00000261587|ENST00000696146|TMEM249	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3579589724541	2	611.356845	1220.69914	1.6593	0.0010144	-0.36667	-0.00022417	1.2927	0.00079028	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.89803	1	32868	32868		1.6526	0.45928	1	10904000	+		10528	11986	5176	5199	12835	12835					0.09761569604233955
IFLNKTFQW	9	Unmodified	_IFLNKTFQW_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8281127810478	2	598.826766	1195.63898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.134	1	64.548	64.048	65.048	1.4134								0	0	0	0.05032	1	26479	26479		60.074	23.947	1				10529	2865	5177	5200	12836	12836					0.04898595265376571
IFLNKTFQW	9	Unmodified	_IFLNKTFQW_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.8287841677666	2	598.826766	1195.63898	2.9533	0.0017685	0.65481	0.00039212	3.6081	0.0021606	598.8273927013093	62.478	0.30989	64.423	64.254	64.564	1.9444					21	9	3	0	0	0	0.032536	1	26226	26226		83.429	23.355	1	3157600			10530	2865	5177	5200	12837	12837					0.04898595265376571
IFLSQPILL	9	Unmodified	_IFLSQPILL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1043.656909167767	1	1043.64994	1042.64267	4.6972	0.0049023	-1.301	-0.0013578	3.3962	0.0035445	1043.6504418825775	87.815	0.31813	88.907	88.734	89.052	1.0918					18	9	3	0	0	0	0.0092758	2	37067	37007;37067		108	0	1	3392500			10531	5225;8062;4242;4785	5178	5201	12838;12839	12839					0.12305265039231017
IFLSQPILL	9	Unmodified	_IFLSQPILL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3309814333916	2	522.328611	1042.64267	5.1063	0.0026672	0.2819	0.00014725	5.3882	0.0028144	522.328718469515	87.832	0.50565	88.924	88.674	89.18	1.0918					44	15	4	0	0	0	0.022807	1	37041	37041		97.075	0	1	7756400			10532	5225;8062;4242;4785	5178	5201	12840	12840					0.12305265039231017
IFLSQPILL	9	Unmodified	_IFLSQPILL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3311035037041	2	522.328611	1042.64267	4.613	0.0024095	0.23406	0.00012226	4.847	0.0025317	522.3286740673203	87.346	0.46768	88.841	88.642	89.11	1.4953					42	14	4	0	0	0	0.022807	1	36792	36792		97.075	0	1	7583900			10533	5225;8062;4242;4785	5178	5201	12841	12841					0.12305265039231017
IFLVPVFLI	9	Unmodified	_IFLVPVFLI_					0	0	0		tr|A0A7D7A6L1|A0A7D7A6L1_9CLOTCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pgsAPE=3SV=1	tr|A0A7D7A6L1|A0A7D7A6L1_9CLOTCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pgsAPE=3SV=1	tr|A0A7D7A6L1|A0A7D7A6L1_9CLOTCDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pgsAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8446533083916	2	530.843897	1059.67324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.465	1	88.961	88.461	89.461	1.4953								0	0	0	0.341	1	36874	36874		14.582	0	1				10534	17310	5179	5202	12842	12842					0.14579043424282645
IFNPVSKNF	9	Unmodified	_IFNPVSKNF_					0	0	0		ENST00000589391.5_1_2:179401165-179403504:+|nuORF;ENST00000415561.1_1_2:179402212-179403504:+|nuORF;ENST00000588244.5_1_2:179402120-179403504:+|nuORF;ENST00000419746.5_1_2:179402219-179403504:+|nuORF;ENST00000589434.5_1_2:179388144-179403504:+|nuORF	ENST00000589391.5_1_2:179401165-179403504:+|nuORF	ENST00000589391.5_1_2:179401165-179403504:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1920043826103	2	533.290017	1064.56548	2.149	0.001146	0.78188	0.00041697	2.9309	0.001563	533.7910798254229	40.075	0.46349	41.938	41.707	42.171	1.8624					27	14	3	0	0	0	0.11684	1	16737	16737		7.9102	1.5561	1	1416000			10535	6402	5180	5203	12843	12843					0.03578046822894976
IFPAIFYFR	9	Unmodified	_IFPAIFYFR_					0	0	0		ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000188338|ENST00000614032|SLC38A3	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3285400271416	2	587.326402	1172.63825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.938	1	66.938	66.438	67.438	0								0	0	0	0.42693	1	27879	27879		2.0598	0	1				10536	4857	5181	5204	12844	12844					0.05883800616311419
IFPKPPLYTF	10	Unmodified	_IFPKPPLYTF_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.8494750857353	2	611.847167	1221.67978	2.9613	0.0018118	0.75191	0.00046005	3.7132	0.0022719	611.8478251043954	64.943	0.56119	66.342	66.071	66.632	1.3989					43	17	3	0	0	0	0.16044	2	27216	27216;27271		53.833	19.431	1	2480700			10537	4465	5182	5205	12845;12846	12845					0.07780936584981646
IFPKPPLYTF	10	Unmodified	_IFPKPPLYTF_					0	0	0		ENSG00000177853|ENST00000316045|ZNF518A;nc|ENSG00000177853|Q6AHZ1-2|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	ENSG00000177853|ENST00000316045|ZNF518A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.8484374880791	2	611.847167	1221.67978	2.2298	0.0013643	1.3754	0.00084156	3.6053	0.0022059	611.8480656632906	64.436	0.63208	66.364	66.077	66.709	1.928					41	19	3	0	0	0	0.12205	2	27033	26980;27033		60.074	30.992	1	2202600			10538	4465	5182	5205	12847;12848	12848					0.07780936584981646
IFPRMVKKG	9	Unmodified	_IFPRMVKKG_					0	0	0		ENST00000563315.2_2_16:50775163-50775262:-|nuORF	ENST00000563315.2_2_16:50775163-50775262:-|nuORF	ENST00000563315.2_2_16:50775163-50775262:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3285400271416	2	538.325879	1074.63721	2.518	0.0013555	2.1751	0.0011709	4.6931	0.0025264	538.3270153260037	86.206	0.66693	86.206	85.945	86.612	0					77	21	5	0	0	0	0.84963	1	35990	35990		0.6015	0	1	163540000			10539	7343	5183	5206	12849	12849					0.10287262975771228
IFQDVLLQF	9	Unmodified	_IFQDVLLQF_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8151122927666	2	561.813325	1121.6121	4.8627	0.002732	0.52159	0.00029304	5.3843	0.003025	561.8135086117438	89.937	0.34593	90.957	90.769	91.115	1.0199					21	10	3	0	0	0	0.44512	1	37941	37941		18.146	3.3081	1	1453200			10540	4700	5184	5207	12850	12850					0.05615486654187407
IFQDVLLQF	9	Unmodified	_IFQDVLLQF_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8131591677666	2	561.813325	1121.6121	4.5099	0.0025337	-0.059412	-3.3379E-05	4.4505	0.0025003	561.812370248894	89.49	0.34607	90.894	90.735	91.081	1.4045					21	10	3	0	0	0	0.23535	1	37705	37705		29.082	8.628	1	978350			10541	4700	5184	5207	12851	12851					0.05615486654187407
IFQLLSVINLV	11	Unmodified	_IFQLLSVINLV_					0	0	0		PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant;nc|ENSG00000110218|Q96RD7-2|PANX1;ENSG00000110218|ENST00000227638|PANX1	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8957397341728	2	629.892106	1257.76966	2.8908	0.0018209	3.5868	0.0022593	6.4776	0.0040802	629.8941528578623	105.92	0.14058	106.08	106	106.14	0.15859					13	6	3	0	0	0	0.98155	1	45233	45233		4.897	1.9018	1	31733000			10542	1701	5185	5208	12852	12852					0.1510856619356673
IFQVARQL	8	Unmodified	_IFQVARQL_					0	0	0		ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	ENSG00000178163|ENST00000326756|ZNF518B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.2892944216728	2	487.792727	973.5709	1.3993	0.00068256	-0.31012	-0.00015127	1.0892	0.00053128	487.79066327052357	48.798	0.27593	50.186	49.987	50.263	1.388					13	8	2	0	0	0	2.3239	1	20440	20440		9.3474	0	1	570740			10543	4475	5186	5209	12853	12853					0.08305770405377189
IFRALLQN	8	Unmodified	_IFRALLQN_					0	0	0		nc|ENSG00000163431|P29536-2|LMOD1;ENSG00000163431|ENST00000367288|LMOD1	nc|ENSG00000163431|P29536-2|LMOD1	nc|ENSG00000163431|P29536-2|LMOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7921325564384	2	487.792727	973.5709	2.6512	0.0012932	-2.7428	-0.0013379	-0.091671	-4.4716E-05	487.79142141632246	63.374	1.9768	64.787	64.045	66.022	1.4134					86	63	2	0	0	0	0.88587	1	26556	26556		5.2307	0.90143	1	1312000			10544	3680	5187	5210	12854	12854					0.0830577040536582
IFREDRQV	8	Unmodified	_IFREDRQV_					0	0	0		tr|A0A7D6VRW7|A0A7D6VRW7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08610PE=4SV=1	tr|A0A7D6VRW7|A0A7D6VRW7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08610PE=4SV=1	tr|A0A7D6VRW7|A0A7D6VRW7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08610PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0699951052666	3	354.861207	1061.56179	0.78749	0.00027945	0.21577	7.6569E-05	1.0033	0.00035602	354.8614885644849	29.59	0.30581	29.869	29.681	29.987	0.2793					14	9	2	0	0	0	2.3239	1	12335	12335		0.45834	0	1	465750			10545	16848	5188	5211	12855	12855					0.03347377049021816
IFRFALALFK	10	Unmodified	_IFRFALALFK_					0	0	0		ENST00000491479.1_1_15:78290504-78294097:-|nuORF;nc|ENSG00000167202|Q9UPU7-2|TBC1D2B;ENSG00000167202|ENST00000300584|TBC1D2B	ENST00000491479.1_1_15:78290504-78294097:-|nuORF	ENST00000491479.1_1_15:78290504-78294097:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.3761474490166	2	613.376426	1224.7383	2.6287	0.0016124	-0.32497	-0.00019933	2.3037	0.0014131	613.3757693998759	97.545	0.12382	97.636	97.559	97.683	0.090881					6	3	2	0	0	0	0.89646	1	40820	40820		1.8442	0	1	2167900			10546	3955	5189	5212	12856	12856					0.13492037950095437
IFRKYREQRLL	11	Unmodified	_IFRKYREQRLL_					0	0	0			REV__nc|ENSG00000198881|Q8WXK4|ASB12	REV__nc|ENSG00000198881|Q8WXK4|ASB12	MSMS	GG20161007_CRH_Patient100_A02_02	2	761.3991577029228	2	761.454259	1520.89397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.099	1	93.267	92.767	93.767	0.16835								0	0	0	0.63775	1	38980	38980		1.4819	0	1		+		10547	11752	5191	5213	12857	12857					0.15435456733598585
IFSAHWES	8	Unmodified	_IFSAHWES_					0	0	0		tr|A0A7D6VSG1|A0A7D6VSG1_9CLOTDioxygenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22730PE=3SV=1	tr|A0A7D6VSG1|A0A7D6VSG1_9CLOTDioxygenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22730PE=3SV=1	tr|A0A7D6VSG1|A0A7D6VSG1_9CLOTDioxygenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22730PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	326.8262206912041	3	326.15562	975.445031	2.6342	0.00085916	2.7591	0.0008999	5.3933	0.0017591	326.1564634804055	96.267	0.21574	96.688	96.572	96.787	0.4212					11	6	2	0	0	0	2.3239	1	40488	40488		1.4819	0	1	1878900			10548	16867	5192	5214	12858	12858					-0.04367361170716322
IFSALPDFSL	10	Unmodified	_IFSALPDFSL_					0	0	0			REV__TMEM62|p.A601Lfs*11|1|0.07|ENSG00000137842|chr15:43184454-43184454|A/-|frameshift_variant	REV__TMEM62|p.A601Lfs*11|1|0.07|ENSG00000137842|chr15:43184454-43184454|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.2978393435478	2	555.297507	1108.58046	2.3094	0.0012824	-0.71974	-0.00039967	1.5896	0.00088272	555.2970850221983	59.559	0.21888	59.885	59.776	59.995	0.32553					11	6	2	0	0	0	0.80568	1	24954	24954		11.64	0	1	854330	+		10549	10032	5193	5215	12859	12859					0.03051493900238711
IFSALPDFSL	10	Unmodified	_IFSALPDFSL_					0	0	0			REV__TMEM62|p.A601Lfs*11|1|0.07|ENSG00000137842|chr15:43184454-43184454|A/-|frameshift_variant	REV__TMEM62|p.A601Lfs*11|1|0.07|ENSG00000137842|chr15:43184454-43184454|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2966796755791	2	555.297507	1108.58046	0.88918	0.00049376	-2.5476	-0.0014147	-1.6584	-0.00092091	555.2953861408938	58.068	0.34273	60.037	59.871	60.214	1.969					20	10	3	0	0	0	0.75645	1	24375	24375		15.847	2.3393	1	4454000	+		10550	10032	5193	5215	12860	12860					0.03051493900238711
IFSIEIHQI	9	Unmodified	_IFSIEIHQI_					0	0	0			REV__tr|A0A553STX4|A0A553STX4_NIACIABCtransporterpermease/substrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05855PE=3SV=1	REV__tr|A0A553STX4|A0A553STX4_NIACIABCtransporterpermease/substrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05855PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2187988162041	2	550.310949	1098.60735	1.6591	0.00091303	1.1285	0.000621	2.7876	0.001534	550.3113351511971	63.545	0.22152	63.545	63.429	63.651	0					12	6	2	0	0	0	0.11833	1	26498	26498		4.3292	0	1	501730	+		10551	15267	5194	5216	12861	12861					0.06198602511426543
IFSIKPLQF	9	Unmodified	_IFSIKPLQF_					0	0	0		GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant;nc|ENSG00000151233|Q4G148-2|GXYLT1;ENSG00000151233|ENST00000398675|GXYLT1	GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant	GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8277465701103	2	546.826235	1091.63792	1.9928	0.0010897	0.64446	0.00035241	2.6372	0.0014421	546.8270647244883	68.534	0.55863	69.899	69.694	70.253	1.3657					38	17	3	0	0	0	0.015029	1	28754	28754		103.35	51.085	1	2162000			10552	3280	5195	5217	12862	12862					0.0957638089644206
IFSIKPLQF	9	Unmodified	_IFSIKPLQF_					0	0	0		GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant;nc|ENSG00000151233|Q4G148-2|GXYLT1;ENSG00000151233|ENST00000398675|GXYLT1	GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant	GXYLT1|p.T239Hfs*15|1|0.3|ENSG00000151233|chr12:42105967-42105967|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8280517458916	2	546.826235	1091.63792	2.2456	0.001228	1.0758	0.00058829	3.3215	0.0018163	546.8268595357673	67.952	0.43041	69.822	69.643	70.073	1.87					30	13	3	0	0	0	0.033504	1	28509	28509		81.89	24.168	1	2338100			10553	3280	5195	5217	12863	12863					0.0957638089644206
IFSISAKKSD	10	Unmodified	_IFSISAKKSD_					0	0	0			REV__tr|A0A7D7A5U3|A0A7D7A5U3_9CLOTMethionyl-tRNAsynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07510PE=3SV=1	REV__tr|A0A7D7A5U3|A0A7D7A5U3_9CLOTMethionyl-tRNAsynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07510PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	548.2510864138603	2	548.305864	1094.59717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.73	1	104.78	104.28	105.28	0.056801								0	0	0	0.66087	1	44237	44237		2.9952	0.93549	1		+		10554	15886	5196	5218	12864	12864					0.05365994786188821
IFSLQSVELF	10	Unmodified	_IFSLQSVELF_					0	0	0			REV__nc|ENSG00000129219|O14939-3|PLD2	REV__nc|ENSG00000129219|O14939-3|PLD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8287841677666	2	591.823889	1181.63323	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.746	1	91.728	91.228	92.228	0.98157								0	0	0	0.65378	1	38229	38229		10.824	0	1		+		10555	9750	5197	5219	12865	12865					0.04967451963034364
IFSRCIFI	8	Unmodified	_IFSRCIFI_					0	0	0		ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7792846560478	2	499.778231	997.541908	2.4165	0.0012077	1.2595	0.00062948	3.676	0.0018372	499.7788372427679	69.606	0.40845	70.972	70.847	71.255	1.3657					22	12	2	0	0	0	0.54738	1	29247	29247		44.407	2.3125	1	2147600			10556	5323	5198	5220	12866	12866					0.04303909784709958
IFSRCIFI	8	Unmodified	_IFSRCIFI_					0	0	0		ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	ENSG00000236532.6,LINC01695,chr21,-,I6.1,28167320,28170077|97|30.84|1|intron	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.778231	997.541908	1.1262	0.00056283	2.4516	0.0012253	3.5778	0.0017881	499.7793727546139	69.052	0.45917	70.905	70.709	71.168	1.853	-0.033575	0.00070857	NaN	44.407	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2080900			10557	5323	5198	5220							0.04303909784709958
IFSSHFLIL	9	Unmodified	_IFSSHFLIL_					0	0	0			REV__ENST00000367607.7_2_1:180082752-180082971:+|nuORF	REV__ENST00000367607.7_2_1:180082752-180082971:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8082763552666	2	538.810585	1075.60662	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.175	1	72.175	71.675	72.675	0								0	0	0	0.14418	1	30054	30054		30.225	1.738	1		+		10558	12630	5199	5221	12867	12867					0.07183807862384128
IFSSRTTILI	10	Unmodified	_IFSSRTTILI_					0	0	0			REV__tr|A0A7D6VSD5|A0A7D6VSD5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06040PE=4SV=1	REV__tr|A0A7D6VSD5|A0A7D6VSD5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06040PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8452636599541	2	575.845156	1149.67576	1.3664	0.00078685	-1.6455	-0.00094757	-0.27912	-0.00016073	575.843704600643	71.038	1.4163	72.861	72.154	73.57	1.8239					89	45	3	0	0	0	0.85124	1	29906	29906		6.7232	0.51738	1	1907700	+		10559	15442	5200	5222	12868	12868					0.10690847091291289
IFTDLSSRF	9	Unmodified	_IFTDLSSRF_					0	0	0		XRCC5-VWA3B|1|fusion;ENSG00000079246|ENST00000392132|XRCC5	XRCC5-VWA3B|1|fusion	XRCC5-VWA3B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2860595583916	2	543.284931	1084.55531	2.019	0.0010969	0.60226	0.0003272	2.6213	0.0014241	543.2852062753301	49.508	0.49218	50.899	50.643	51.135	1.3911					48	15	4	0	0	0	0.019486	3	20730	20679;20730;20781		99.755	27.833	1	16480000			10560	17358	5201	5223	12869;12870;12871	12870					0.016414390976706272
IFTDLSSRF	9	Unmodified	_IFTDLSSRF_					0	0	0		XRCC5-VWA3B|1|fusion;ENSG00000079246|ENST00000392132|XRCC5	XRCC5-VWA3B|1|fusion	XRCC5-VWA3B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2858764529228	2	543.284931	1084.55531	1.8166	0.00098694	0.20582	0.00011182	2.0224	0.0010988	543.2849888788095	48.983	0.58659	50.96	50.7	51.286	1.9772					49	18	4	0	0	0	0.0037498	4	20546	20463;20507;20546;20594		125.53	29.418	1	18888000			10561	17358	5201	5223	12872;12873;12874;12875	12874					0.016414390976706272
IFTDVALKF	9	Unmodified	_IFTDVALKF_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3042480349541	2	527.302593	1052.59063	2.2643	0.001194	3.152	0.001662	5.4162	0.002856	527.3035636469564	63.585	0.40068	64.998	64.845	65.246	1.4134					20	12	2	0	0	0	0.063746	1	26648	26648		62.573	20.478	1	4475300			10562	2263	5202	5224	12876	12876					0.06644101625465737
IFTDVALKF	9	Unmodified	_IFTDVALKF_					0	0	0		ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3047363162041	2	527.302593	1052.59063	2.339	0.0012334	2.3861	0.0012582	4.7251	0.0024915	527.3031671080352	63.037	0.36987	64.982	64.782	65.152	1.9444					20	11	2	0	0	0	0.037098	1	26422	26422		78.728	30.979	1	4205000			10563	2263	5202	5224	12877	12877					0.06644101625465737
IFTFFNIKG	9	Unmodified	_IFTFFNIKG_					0	0	0		ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	ENSG00000221947|ENST00000408926|XKR9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2531310915947	3	362.870932	1085.59097	0.32352	0.0001174	-1.1597	-0.00042081	-0.83615	-0.00030341	362.8705142825935	27.053	0.46316	28.8	28.556	29.019	1.747					21	14	2	0	0	0	0.11938	1	11306	11306		1.1933	0	1	513830			10564	5276	5203	5225	12878	12878					0.05159521345308349
IFVAMKEV	8	Unmodified	_IFVAMKEV_					0	0	0		ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.7658569216728	2	468.764789	935.515025	2.6048	0.001221	-0.29468	-0.00013813	2.3101	0.0010829	468.7647610373462	62.937	0.43812	63.267	63.067	63.505	0.32974					33	13	3	0	0	0	0.47134	1	26374	26374		49.669	3.648	1	3248600			10565	893	5204	5226	12879	12879					0.0446880117353885
IFVAMKEV	8	Unmodified	_IFVAMKEV_					0	0	0		ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	ENSG00000072954|ENST00000187762|TMEM38A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7665893435478	2	468.764789	935.515025	3.1347	0.0014695	0.49506	0.00023207	3.6298	0.0017015	468.7651857546555	61.615	0.49845	63.032	62.804	63.303	1.4177					35	15	3	0	0	0	0.41488	1	25847	25847		53.576	5.2297	1	3736900			10566	893	5204	5226	12880	12880					0.0446880117353885
IFVFEKGEQTF	11	Unmodified	_IFVFEKGEQTF_					0	0	0		nc|ENSG00000164188|Q86VV4-2|RANBP3L;ENSG00000164188|ENST00000296604|RANBP3L;nc|ENSG00000164188|Q86VV4-3|RANBP3L	nc|ENSG00000164188|Q86VV4-2|RANBP3L	nc|ENSG00000164188|Q86VV4-2|RANBP3L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	672.2513915896416	2	672.845353	1343.67615	4.8276	0.0032482	-2.8558	-0.0019215	1.9717	0.0013267	673.3447824013721	89.674	0.30756	90.694	90.524	90.831	1.0199					17	9	2	0	0	0	0.14606	1	37759	37759		3.2813	0	1	631100			10567	3758	5205	5227	12881	12881					0.018062220204456025
IFVYEGYVV	9	Unmodified	_IFVYEGYVV_					0	0	0		ENSG00000078898|ENST00000170150|BPIFB2	ENSG00000078898|ENST00000170150|BPIFB2	ENSG00000078898|ENST00000170150|BPIFB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.7853271365166	2	544.786776	1087.559	2.254	0.001228	-3.0254	-0.0016482	-0.77134	-0.00042021	544.7847509285551	82.72	0.30482	82.99	82.847	83.152	0.27029					15	9	2	0	0	0	0.44535	1	34589	34589		18.135	1.0221	1	913920			10568	984	5206	5228	12882	12882					0.0187210887152105
IFWKKKLGM	9	Unmodified	_IFWKKKLGM_					0	0	0			REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8438598513603	2	575.843905	1149.67326	1.7289	0.00099559	-0.86713	-0.00049933	0.8618	0.00049626	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.76456	6	31169	31169;31219;31257;31297;31482;31587		4.756	2.4533	1	9020800	+		10569	14763	5207	5229	12883;12884;12885;12886;12887;12888	12883					0.10440720152632821
IFWKKKLGM	9	Unmodified	_IFWKKKLGM_					0	0	0			REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8442260622978	2	575.843905	1149.67326	2.4428	0.0014067	-1.2311	-0.00070895	1.2117	0.00069775	575.8429155797212	74.786	2.1061	75.11	74.169	76.275	0.32463					197	66	4	0	0	0	0.82604	7	31108	31108;31149;31240;31368;31446;31489;31696		2.3027	0.40713	1	9924500	+		10570	14763	5207	5229	12889;12890;12891;12892;12893;12894;12895	12889					0.10440720152632821
IFWKKKLGM	9	Unmodified	_IFWKKKLGM_					0	0	0			REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	REV__tr|A0A553SGP7|A0A553SGP7_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11250PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8445922732353	2	575.843905	1149.67326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.275	1	71.599	71.099	72.099	0.32359								0	0	0	0.42693	1	29831	29831		2.0598	0.57785	1		+		10571	14763	5207	5229	12896	12896					0.10440720152632821
IFYFLRLL	8	Unmodified	_IFYFLRLL_					0	0	0			REV__ENST00000348520.10_2_14:104168248-104168920:+|nuORF	REV__ENST00000348520.10_2_14:104168248-104168920:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8361694216728	2	542.83132	1083.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.767	1	90.214	89.714	90.714	1.4467								0	0	0	1.0178	1	37405	37405		6.3541	0	1		+		10572	12527	5208	5230	12897	12897					0.1096098862171857
IFYHFSIL	8	Unmodified	_IFYHFSIL_					0	0	0			REV__tr|A0A553SGS5|A0A553SGS5_NIACIDUF4305domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11415PE=4SV=1	REV__tr|A0A553SGS5|A0A553SGS5_NIACIDUF4305domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11415PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7885009646416	2	520.284203	1038.55385	1.7556	0.00091341	1.0059	0.00052335	2.7615	0.0014368	520.282724540252	49.272	0.49815	51.249	51.008	51.506	1.9772					29	15	3	0	0	0	0.78622	1	20629	20629		22.453	0	1	1765800	+		10573	14766	5209	5231	12898	12898					0.03611849799585798
IGAEVYHNLK	10	Unmodified	_IGAEVYHNLK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.8762084841728	3	381.876746	1142.60841	-0.1826	-6.973E-05	-0.71024	-0.00027122	-0.89284	-0.00034095	381.8763231183927	18.265	0.25149	19.244	19.117	19.369	0.97922					20	8	3	0	0	0	0.62631	1	7624	7624		21.799	13.854	1	770760			10574	919	5210	5232	12899	12899					0.04280816880304883
IGAEVYHNLK	10	Unmodified	_IGAEVYHNLK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.8764526247978	3	381.876746	1142.60841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.761	1	19.209	18.709	19.709	1.448								0	0	0	0.45197	1	7378	7378		27.088	14.861	1				10575	919	5210	5232	12900	12900					0.04280816880304883
IGAIAATLYSL	11	Unmodified	_IGAIAATLYSL_					0	0	0		tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	tr|A0A7D6VV32|A0A7D6VV32_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8195068240166	2	546.818607	1091.62266	2.4194	0.001323	-0.33541	-0.00018341	2.084	0.0011396	546.8185197225661	75.558	0.37123	75.88	75.678	76.049	0.32163					27	11	3	0	0	0	0.81656	1	31573	31573		14.838	0.93222	1	2810900			10576	16961	5211	5233	12901	12901					0.08051469308588821
IGAYAVIYL	9	Unmodified	_IGAYAVIYL_					0	0	0		nc|ENSG00000079335|Q9UNH5-4|CDC14A;nc|ENSG00000079335|Q9UNH5-3|CDC14A;CDC14A|p.S479*|1|0.31|ENSG00000079335|chr1:100498941-100498959|CTCCCGGCTAGCCAGTTCT/-|frameshift_variant;ENSG00000079335|ENST00000336454|CDC14A;nc|ENSG00000079335|Q9UNH5-5|CDC14A;nc|ENSG00000079335|Q9UNH5-2|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5636474490166	1	982.560795	981.553519	3.2927	0.0032353	-0.58403	-0.00057384	2.7087	0.0026614	982.5600930018919	75.445	4.7328	76.752	76.247	80.98	1.3063					380	152	4	0	0	0	0.24585	1	32543	32543		28.173	0	1	50304000			10577	131	5212	5234	12902	12902					0.062004300797070755
IGAYAVIYL	9	Unmodified	_IGAYAVIYL_					0	0	0		nc|ENSG00000079335|Q9UNH5-4|CDC14A;nc|ENSG00000079335|Q9UNH5-3|CDC14A;CDC14A|p.S479*|1|0.31|ENSG00000079335|chr1:100498941-100498959|CTCCCGGCTAGCCAGTTCT/-|frameshift_variant;ENSG00000079335|ENST00000336454|CDC14A;nc|ENSG00000079335|Q9UNH5-5|CDC14A;nc|ENSG00000079335|Q9UNH5-2|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	nc|ENSG00000079335|Q9UNH5-4|CDC14A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5653564333916	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.24585	2	32375	32375;32750		28.173	0	1	44767000			10578	131	5212	5234	12903;12904	12903					0.062004300797070755
IGCEKMVFM	9	Unmodified	_IGCEKMVFM_					0	0	0		tr|A0A7D7A696|A0A7D7A696_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09495PE=4SV=1	tr|A0A7D7A696|A0A7D7A696_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09495PE=4SV=1	tr|A0A7D7A696|A0A7D7A696_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2509033083916	2	529.247591	1056.48063	1.8361	0.00097176	1.2138	0.00064242	3.05	0.0016142	529.248390571443	78.989	0.36446	79.299	79.078	79.443	0.30932					22	11	3	0	0	0	0.46566	1	33066	33066		18.135	0	1	1681300			10579	17306	5213	5235	12905	12905					-0.04535106301227643
IGDEFGKYI	9	Unmodified	_IGDEFGKYI_					0	0	0			REV__nc|ENSG00000169599|Q9UMS0-2|NFU1	REV__nc|ENSG00000169599|Q9UMS0-2|NFU1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2670165896416	2	521.266207	1040.51786	2.666	0.0013897	-4.4477	-0.0023184	-1.7817	-0.00092876	521.2631088576974	78.094	0.7308	79.375	78.95	79.68	1.2809					55	23	4	0	0	0	0.059546	1	32831	32831		64.236	0.2758	1	10880000	+		10580	10956	5214	5236	12906	12906					-0.0007765216794268781
IGDEFGKYI	9	Unmodified	_IGDEFGKYI_					0	0	0			REV__nc|ENSG00000169599|Q9UMS0-2|NFU1	REV__nc|ENSG00000169599|Q9UMS0-2|NFU1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2651244997978	2	521.266207	1040.51786	1.3054	0.00068046	-3.1089	-0.0016206	-1.8035	-0.00094011	521.2644835648051	77.62	0.61324	79.371	79.009	79.622	1.7514					41	19	3	0	0	0	0.059546	1	32541	32541		64.236	6.5143	1	11848000	+		10581	10956	5214	5236	12907	12907					-0.0007765216794268781
IGDFISKTI	9	Unmodified	_IGDFISKTI_					0	0	0			REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	498.1343261599541	2	497.2844	992.554247	1.6213	0.00080625	0.33938	0.00016877	1.9607	0.00097502	497.2847419883121	55.871	0.23618	55.871	55.762	55.999	0					11	7	2	0	0	0	0.11645	1	23282	23282		4.756	0	1	784880	+		10582	15753	5215	5237	12908	12908					0.057672247287769096
IGDFISKTI	9	Unmodified	_IGDFISKTI_					0	0	0			REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	497.2844	992.554247	2.6849	0.0013351	1.1845	0.00058904	3.8694	0.0019242	497.2851992984562	55.317	0.25346	55.638	55.485	55.738	0.32088	0.052041	-5.8886E-05	NaN	4.756	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	804670	+		10583	15753	5215	5237							0.057672247287769096
IGDFISKTI	9	Unmodified	_IGDFISKTI_					0	0	0			REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	REV__tr|A0A7D6ZWX8|A0A7D6ZWX8_9CLOTRusAfamilycrossoverjunctionendodeoxyribonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.2844	992.554247	1.4341	0.00071316	2.5844	0.0012852	4.0185	0.0019983	497.2859741043353	53.981	0.28901	55.384	55.228	55.517	1.4034	-0.20123	0.0013333	NaN	4.756	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1793300	+		10584	15753	5215	5237							0.057672247287769096
IGERKQNI	8	Unmodified	_IGERKQNI_					0	0	0			REV__nc|ENSG809|P63128|ERVK-9_pol	REV__nc|ENSG809|P63128|ERVK-9_pol	MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2790405154228	2	479.277441	956.540328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.222	1	79.957	79.457	80.457	1.735								0	0	0	1.0178	1	32806	32806		5.7604	0	1		+		10585	14579	5216	5238	12909	12909					0.06031992020314192
IGFHSLHE	8	Unmodified	_IGFHSLHE_					0	0	0			REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2403137087822	2	470.237784	938.461016	2.2722	0.0010685	4.015	0.001888	6.2873	0.0029565	470.23906612421587	65.411	0.22424	65.411	65.258	65.482	0					11	6	2	0	0	0	0.88504	1	27281	27281		5.7604	0	1	444460	+		10586	9335	5217	5239	12910	12910					-0.01067654933808626
IGFHSLHE	8	Unmodified	_IGFHSLHE_					0	0	0			REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	470.237784	938.461016	2.2722	0.0010685	4.015	0.001888	6.2873	0.0029565	470.23906612421587	65.411	0.22424	65.411	65.258	65.482	0	0.15254	-1.4283E-05	NaN	5.7604	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444460	+		10587	9335	5217	5239							-0.01067654933808626
IGFHSLHE	8	Unmodified	_IGFHSLHE_					0	0	0			REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	REV__ENST00000535080.1_1_12:6966027-6967782:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	470.237784	938.461016	2.5645	0.0012059	4.0481	0.0019036	6.6126	0.0031095	470.2394397399091	63.162	0.28206	65.106	64.934	65.216	1.9444	-0.15254	1.6849E-05	NaN	5.7604	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565220	+		10588	9335	5217	5239							-0.01067654933808626
IGGFASLVV	9	Unmodified	_IGGFASLVV_					0	0	0			REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	862.5056030154228	1	862.503281	861.496004	2.0215	0.0017435	0.5452	0.00047024	2.5667	0.0022138	862.50360305297	68.646	0.49842	70.012	69.754	70.253	1.3657					37	15	3	0	0	0	0.078975	3	28810	28759;28810;28847		56.541	5.2297	1	7080800	+		10589	14734	5218	5240	12911;12912;12913	12912					0.05971587874148554
IGGFASLVV	9	Unmodified	_IGGFASLVV_					0	0	0			REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	862.5053588747978	1	862.503281	861.496004	2.1871	0.0018864	0.16652	0.00014362	2.3536	0.00203	862.5031956448053	68.063	0.46483	69.933	69.704	70.169	1.87					33	14	3	0	0	0	0.078975	2	28615	28562;28615		56.541	0	1	6825200	+		10590	14734	5218	5240	12914;12915	12915					0.05971587874148554
IGGFASLVV	9	Unmodified	_IGGFASLVV_					0	0	0			REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	REV__tr|A0A553SG62|A0A553SG62_NIACIFtsX-likepermeasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10280PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	862.503281	861.496004	2.0215	0.0017435	0.5452	0.00047024	2.5667	0.0022138	862.50360305297	68.646	0.49842	70.012	69.754	70.253	1.3657	0.039539	0.00015258	NaN	56.541	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7080800	+		10591	14734	5218	5240							0.05971587874148554
IGGIGTVPVGR	11	Unmodified	_IGGIGTVPVGR_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.3096191287041	2	513.308741	1024.60293	1.0726	0.00055055	1.8739	0.00096187	2.9464	0.0015124	513.3094043269076	30.442	0.34088	31.724	31.564	31.905	1.2825					23	10	3	0	0	0	0.13485	2	12749	12749;12812		49.527	24.853	1	1306200			10592	1331	5219	5241	12916;12917	12916					0.09161138088529697
IGGIGTVPVGR	11	Unmodified	_IGGIGTVPVGR_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000436459.2_1_9:135895553-135896258:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.3087646365166	2	513.308741	1024.60293	1.1716	0.00060137	0.10303	5.2887E-05	1.2746	0.00065426	513.3085345053909	29.938	0.24617	31.753	31.646	31.892	1.8151					14	7	2	0	0	0	0.10312	2	12535	12535;12586		55.235	28.967	1	1798200			10593	1331	5219	5241	12918;12919	12918					0.09161138088529697
IGGLAARLQL	10	Unmodified	_IGGLAARLQL_					0	0	0		ENSG00000135723|ENST00000258201|FHOD1	ENSG00000135723|ENST00000258201|FHOD1	ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3189575076103	2	506.319109	1010.62366	1.6706	0.00084585	-1.8268	-0.00092497	-0.15626	-7.9119E-05	506.31828180432035	53.889	0.3509	55.289	55.163	55.514	1.4005					17	11	2	0	0	0	0.28892	2	22548	22548;22597		39.957	5.8549	1	1389100			10594	2684	5220	5242	12920;12921	12920					0.11877728468175519
IGGLEVLEV	9	Unmodified	_IGGLEVLEV_					0	0	0		tr|A0A553SS42|A0A553SS42_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_02250PE=3SV=1	tr|A0A553SS42|A0A553SS42_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_02250PE=3SV=1	tr|A0A553SS42|A0A553SS42_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_02250PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.5336791872978	1	928.534975	927.527698	1.3676	0.0012698	-0.80059	-0.00074337	0.56697	0.00052645	928.5340410277554	77.554	0.36221	79.305	79.105	79.467	1.7514					21	11	3	0	0	0	0.033521	1	32539	32539		81.864	3.8797	1	6873700			10595	16593	5221	5243	12922	12922					0.061035358374169846
IGGLGAIGV	9	Unmodified	_IGGLGAIGV_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	756.4617797732353	1	756.461416	755.454139	1.1843	0.00089591	-0.094782	-7.1699E-05	1.0896	0.00082421	756.4612628146917	56.815	0.30641	58.229	58.063	58.369	1.4145					16	9	2	0	0	0	0.11074	1	23797	23797		45.75	0	1	3366300			10596	16590	5222	5244	12923	12923					0.06663032185610973
IGGLQNNN	8	Unmodified	_IGGLQNNN_					0	0	0			REV__ENSG00000156564|ENST00000338305|LRFN2	REV__ENSG00000156564|ENST00000338305|LRFN2	MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2119933962822	2	415.211766	828.40898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.42	1	106.42	105.92	106.92	0								0	0	0	1.0178	1	45400	45400		0.79363	0	1		+		10597	10515	5223	5245	12924	12924					-0.012088183475839287
IGGTELNLS	9	Unmodified	_IGGTELNLS_					0	0	0			REV__tr|A0A553SFS5|A0A553SFS5_NIACIS9familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09430PE=4SV=1	REV__tr|A0A553SFS5|A0A553SFS5_NIACIS9familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2433959841728	2	452.242732	902.470912	1.8361	0.00083036	-0.19038	-8.6098E-05	1.6457	0.00074427	452.2425961284896	32.797	0.20826	33.091	32.959	33.167	0.29431					12	6	3	0	0	0	0.15478	1	13755	13755		38.151	2.107	1	1946300	+		10598	14717	5224	5246	12925	12925					0.015774882808955226
IGHELETII	9	Unmodified	_IGHELETII_					0	0	0			REV__tr|A0A7D6VRT2|A0A7D6VRT2_9CLOTMolybdenumcofactorbiosynthesisproteinBOS=ClostridiumintestinaleOX=36845GN=HZF06_02155PE=3SV=1	REV__tr|A0A7D6VRT2|A0A7D6VRT2_9CLOTMolybdenumcofactorbiosynthesisproteinBOS=ClostridiumintestinaleOX=36845GN=HZF06_02155PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7895995974541	2	512.787307	1023.56006	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.646	1	60.646	60.146	61.146	0								0	0	0	0.40883	1	25290	25290		7.9102	3.1541	1		+		10599	15425	5225	5247	12926	12926					0.049223232404415285
IGHLLLVSFRA	11	Unmodified	_IGHLLLVSFRA_					0	0	0			REV__ENST00000473912.1_1_3:52005470-52008081:-|nuORF	REV__ENST00000473912.1_1_3:52005470-52008081:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	307.7905151247978	4	307.190846	1224.73428	-2.5448	-0.00078173	-1.1568	-0.00035535	-3.7016	-0.0011371	307.19101779138515	34.669	0.65642	34.669	34.338	34.995	0					30	20	3	0	0	0	0.14606	1	14566	14566		0.08335	0	1	845990	+		10600	9417	5226	5248	12927	12927					0.13089948456422462
IGIGTSKFL	9	Unmodified	_IGIGTSKFL_					0	0	0			REV__nc|ENSG00000179593|O15296-2|ALOX15B	REV__nc|ENSG00000179593|O15296-2|ALOX15B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2819702029228	2	468.28166	934.548768	2.9761	0.0013937	-2.8285	-0.0013245	0.14764	6.9135E-05	468.2805387145009	87.716	0.35765	87.716	87.551	87.909	0					25	11	3	0	0	0	0.10473	2	36693	36642;36693		47.749	3.901	1	3135800	+		10601	14496	5227	5249	12928;12929	12929					0.07887545936955576
IGIGTSKFL	9	Unmodified	_IGIGTSKFL_					0	0	0			REV__nc|ENSG00000179593|O15296-2|ALOX15B	REV__nc|ENSG00000179593|O15296-2|ALOX15B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.2823974490166	2	468.28166	934.548768	3.2988	0.0015448	-2.2851	-0.0010701	1.0137	0.0004747	468.2808046019329	87.289	0.31976	87.533	87.361	87.681	0.24387					21	10	3	0	0	0	0.091139	1	36613	36613		52.268	3.9225	1	2166400	+		10602	14496	5227	5249	12930	12930					0.07887545936955576
IGIGTSKFL	9	Unmodified	_IGIGTSKFL_					0	0	0			REV__nc|ENSG00000179593|O15296-2|ALOX15B	REV__nc|ENSG00000179593|O15296-2|ALOX15B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	468.28166	934.548768	3.2988	0.0015448	-2.2851	-0.0010701	1.0137	0.0004747	468.2808046019329	87.289	0.31976	87.533	87.361	87.681	0.24387	-0.069999	0.00064859	NaN	52.268	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2166400	+		10603	14496	5227	5249							0.07887545936955576
IGIGTSKFL	9	Unmodified	_IGIGTSKFL_					0	0	0			REV__nc|ENSG00000179593|O15296-2|ALOX15B	REV__nc|ENSG00000179593|O15296-2|ALOX15B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	468.28166	934.548768	3.6107	0.0016908	-4.4819	-0.0020988	-0.87119	-0.00040796	468.28008190951675	86.432	0.15335	87.559	87.487	87.641	1.1265	-0.043664	-0.0014088	NaN	52.268	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1906300	+		10604	14496	5227	5249							0.07887545936955576
IGIPTKLLP	9	Unmodified	_IGIPTKLLP_					0	0	0		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.8792602419853	3	317.879428	950.616454	-0.40613	-0.0001291	-0.6641	-0.0002111	-1.0702	-0.0003402	317.8792723075811	16.243	0.31455	17.282	17.091	17.405	1.0392					21	11	2	0	0	0	0.83148	1	6745	6745		2.086	0.43339	1	2218400			10605	930	5228	5250	12931	12931					0.13916995867759852
IGIPTKLLP	9	Unmodified	_IGIPTKLLP_					0	0	0		ENSG00000075399|ENST00000389386|VPS9D1;nc|ENSG00000075399|Q9Y2B5-2|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	ENSG00000075399|ENST00000389386|VPS9D1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	317.879428	950.616454	-0.24474	-7.7798E-05	0.055687	1.7702E-05	-0.18905	-6.0096E-05	317.87919358515984	17.318	0.43815	17.469	17.217	17.655	0.15093	0.079863	0.00095512	NaN	2.086	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1452600			10606	930	5228	5250							0.13916995867759852
IGIRQLSQS	9	Unmodified	_IGIRQLSQS_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2901183962822	2	501.290548	1000.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.671	1	64.671	64.171	65.171	0								0	0	0	0.42693	1	26956	26956		3.9444	0	1				10607	1526	5229	5251	12932	12932					0.06628261191815454
IGIVLGPAVL	10	Unmodified	_IGIVLGPAVL_					0	0	0		tr|A0A553SRH3|A0A553SRH3_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_01090PE=3SV=1	tr|A0A553SRH3|A0A553SRH3_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_01090PE=3SV=1	tr|A0A553SRH3|A0A553SRH3_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_01090PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	317.1956970095634	3	317.879428	950.616454	1.4353	0.00045624	-0.35232	-0.000112	1.083	0.00034425	317.8791888619003	40.427	0.40304	42.29	42.114	42.517	1.8624					17	12	2	0	0	0	0.12555	1	16910	16910		2.086	0	1	2162900			10608	16557	5230	5252	12933	12933					0.13916995867759852
IGKLNMRRQPP	11	Unmodified	_IGKLNMRRQPP_					0	0	0			REV__ENSG00000198286|ENST00000396946|CARD11	REV__ENSG00000198286|ENST00000396946|CARD11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2584716677666	3	437.255563	1308.74486	2.7867	0.0012185	3.0858	0.0013493	5.8725	0.0025678	437.25661761529017	83.584	1.1665	83.855	83.091	84.257	0.27029					77	37	3	0	0	0	1.039	1	35015	35015		0.45452	0.046251	1	1929400	+		10609	11707	5231	5253	12934	12934					0.10283607839210163
IGKPATAKL	9	Unmodified	_IGKPATAKL_					0	0	0		ARID4B-GNPAT|1|fusion;nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT	ARID4B-GNPAT|1|fusion	ARID4B-GNPAT|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	898.5737792849541	1	898.572029	897.564752	2.8126	0.0025273	-0.73112	-0.00065697	2.0814	0.0018703	898.5718228748841	107.69	0.39594	107.74	107.48	107.88	0.052452					33	20	3	0	0	0	0.83753	1	46123	46123		1.8442	1.0506	1	17696000			10610	78	5232	5254	12935	12935					0.11187252173851903
IGKPATAKL	9	Unmodified	_IGKPATAKL_					0	0	0		ARID4B-GNPAT|1|fusion;nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT	ARID4B-GNPAT|1|fusion	ARID4B-GNPAT|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	898.572029	897.564752	1.1395	0.0010239	0.79058	0.0007104	1.9301	0.0017343	898.5734144699462	107.73	0.22084	107.73	107.58	107.81	0	-0.046703	0.0013867	NaN	1.8442	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21657000			10611	78	5232	5254							0.11187252173851903
IGKPATAKL	9	Unmodified	_IGKPATAKL_					0	0	0		ARID4B-GNPAT|1|fusion;nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT	ARID4B-GNPAT|1|fusion	ARID4B-GNPAT|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	898.572029	897.564752	2.8945	0.0026009	0.16009	0.00014386	3.0546	0.0027448	898.5734258203846	107.66	0.16335	107.82	107.72	107.88	0.15781	0.0413	0.00082018	NaN	1.8442	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22312000			10612	78	5232	5254							0.11187252173851903
IGKPATAKL	9	Unmodified	_IGKPATAKL_					0	0	0		ARID4B-GNPAT|1|fusion;nc|ENSG00000116906|O15228-2|GNPAT;ENSG00000116906|ENST00000366647|GNPAT	ARID4B-GNPAT|1|fusion	ARID4B-GNPAT|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	898.572029	897.564752	3.0783	0.0027661	-1.8945	-0.0017024	1.1838	0.0010637	898.5708330266469	107.66	0.32079	107.81	107.54	107.86	0.15795	0.03826	-0.001026	NaN	1.8442	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19301000			10613	78	5232	5254							0.11187252173851903
IGLARHRTL	9	Unmodified	_IGLARHRTL_					0	0	0			REV__chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|1	REV__chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1379882693291	2	518.82235	1035.63015	1.3142	0.00068181	0.63219	0.00032799	1.9463	0.0010098	518.822991132039	70.665	0.30009	72.503	72.291	72.591	1.8378					14	9	2	0	0	0	0.11333	1	29595	29595		4.756	0	1	816440	+		10614	8298	5233	5255	12936	12936					0.11375666419553454
IGLARHRTL	9	Unmodified	_IGLARHRTL_					0	0	0			REV__chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|1	REV__chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.82235	1035.63015	2.6572	0.0013786	2.1897	0.0011361	4.8469	0.0025147	518.823662156668	71.157	0.2962	72.499	72.333	72.629	1.3415	-0.0021796	0.0011975	NaN	4.756	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793620	+		10615	8298	5233	5255							0.11375666419553454
IGLAWFFV	8	Unmodified	_IGLAWFFV_					0	0	0			REV__tr|A0A553SSZ6|A0A553SSZ6_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_04125PE=4SV=1	REV__tr|A0A553SSZ6|A0A553SSZ6_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_04125PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1992980837822	2	476.768189	951.521825	3.0141	0.001437	2.9472	0.0014051	5.9613	0.0028421	476.7694375498642	82.588	0.21439	82.868	82.766	82.98	0.2802					10	6	2	0	0	0	2.3239	1	34529	34529		2.8892	0	1	546570	+		10616	15224	5234	5256	12937	12937					0.044124821164245986
IGLHRRRFHRR	11	Unmodified	_IGLHRRRFHRR_					0	0	0			REV__ENST00000361384.6_1_10:115612897-115612960:-|nuORF	REV__ENST00000361384.6_1_10:115612897-115612960:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9726440310478	3	501.97126	1502.89195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.606	1	50.606	50.106	51.106	0								0	0	0	0.63775	1	21110	21110		0.45452	0	1		+		10617	12603	5235	5257	12938	12938					0.16061885558997346
IGLIALREK	9	Unmodified	_IGLIALREK_					0	0	0			REV__nc|ENSG00000072110|P12814-2|ACTN1	REV__nc|ENSG00000072110|P12814-2|ACTN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8281127810478	2	506.829309	1011.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.163	1	12.163	11.663	12.663	0								0	0	0	0.317	1	5032	5032		16.942	6.7589	1		+		10618	8731	5236	5258	12939	12939					0.13870899127994107
IGMEKFFNI	9	Unmodified	_IGMEKFFNI_					0	0	0		MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant;ENSG00000100714|ENST00000652337|MTHFD1;MTHFD1-CASK|3|fusion;MTHFD1-CASK|2|fusion;MTHFD1-CASK|1|fusion	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7871581912041	2	549.786253	1097.55795	2.5595	0.0014072	-3.0544	-0.0016793	-0.49489	-0.00027208	549.7860515768384	65.425	0.37172	66.824	66.632	67.004	1.3989					25	11	3	0	0	0	0.0037498	2	27464	27413;27464		125.53	36.128	1	4680600			10619	1298	5237	5259	12940;12941	12941					0.01307571230972826
IGMEKFFNI	9	Unmodified	_IGMEKFFNI_					0	0	0		MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant;ENSG00000100714|ENST00000652337|MTHFD1;MTHFD1-CASK|3|fusion;MTHFD1-CASK|2|fusion;MTHFD1-CASK|1|fusion	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7868530154228	2	549.786253	1097.55795	1.7903	0.0009843	-0.46662	-0.00025654	1.3237	0.00072775	549.7862708334203	64.983	0.37363	66.891	66.658	67.032	1.9085					25	11	3	0	0	0	0.0070725	2	27281	27230;27281		114.2	43.87	1	4900100			10620	1298	5237	5259	12942;12943	12943					0.01307571230972826
IGMELLTGFI	10	Unmodified	_IGMELLTGFI_					0	0	0		ENST00000489756.1_1_2:25705728-25720263:-|nuORF;ENST00000486555.5_1_2:25705724-25720338:-|nuORF	ENST00000489756.1_1_2:25705728-25720263:-|nuORF	ENST00000489756.1_1_2:25705728-25720263:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3041259646416	2	547.301736	1092.58892	3.9309	0.0021514	0.18305	0.00010018	4.1139	0.0022516	547.3016428768653	91.533	0.40633	92.469	92.182	92.588	0.93623					31	12	3	0	0	0	0.77604	1	38498	38498		14.838	0.25658	1	1985500			10621	6865	5238	5260	12944	12944					0.0463272454521757
IGMGATLDI	9	Unmodified	_IGMGATLDI_					0	0	0		nc|ENSG00000134882|Q8NBM4-4|UBAC2;ENST00000480738.1_1_13:99967048-100037586:+|nuORF;nc|ENSG00000134882|Q8NBM4-3|UBAC2;nc|ENSG00000134882|Q8NBM4-2|UBAC2;ENSG00000134882|ENST00000403766|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	nc|ENSG00000134882|Q8NBM4-4|UBAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	890.4658080935478	1	890.46518	889.457904	2.3488	0.0020915	2.165	0.0019278	4.5138	0.0040194	890.4670218231532	62.885	0.40136	64.829	64.532	64.934	1.9444					19	12	2	0	0	0	0.10722	1	26360	26360		46.921	0	1	905440			10622	2640	5239	5261	12945	12945					0.008753338971700941
IGMKALNLI	9	Unmodified	_IGMKALNLI_					0	0	0		tr|A0A553SRN4|A0A553SRN4_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01480PE=4SV=1	tr|A0A553SRN4|A0A553SRN4_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01480PE=4SV=1	tr|A0A553SRN4|A0A553SRN4_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01480PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8005248904228	2	486.799163	971.583773	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.937	1	58.352	57.852	58.852	1.4145								0	0	0	0.22015	1	23863	23863		24.674	0.46393	1				10623	16570	5240	5262	12946	12946					0.09684465473253567
IGNEFILKA	9	Unmodified	_IGNEFILKA_					0	0	0			REV__tr|A0A7D6ZSG7|A0A7D6ZSG7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07730PE=3SV=1	REV__tr|A0A7D6ZSG7|A0A7D6ZSG7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07730PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	502.2213928103447	2	502.792392	1003.57023	2.1964	0.0011043	1.2285	0.00061766	3.4248	0.001722	502.79320402286953	52.287	0.34224	52.613	52.435	52.777	0.32554					24	10	3	0	0	0	0.098208	1	21870	21870		24.021	3.5669	1	3403700	+		10624	15707	5241	5263	12947	12947					0.06858930965665877
IGNVTYKIP	9	Unmodified	_IGNVTYKIP_					0	0	0		tr|A0A553SNG8|A0A553SNG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24360PE=4SV=1	tr|A0A553SNG8|A0A553SNG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24360PE=4SV=1	tr|A0A553SNG8|A0A553SNG8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.7931701540947	2	502.792392	1003.57023	1.9581	0.00098451	0.71643	0.00036022	2.6745	0.0013447	502.79260579256135	52.9	0.37931	52.9	52.695	53.075	0					27	11	3	0	0	0	0.30098	1	22106	22106		25.399	1.3787	1	3492000			10625	16420	5242	5264	12948	12948					0.06858930965665877
IGPLDLLQI	9	Unmodified	_IGPLDLLQI_					0	0	0			REV__ENST00000578767.5_1_17:17997264-18002438:+|nuORF	REV__ENST00000578767.5_1_17:17997264-18002438:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.3050414919853	2	491.302593	980.590633	2.2063	0.001084	1.1668	0.00057327	3.3732	0.0016573	491.3030436944224	89.099	0.22118	89.099	88.988	89.209	0					10	6	2	0	0	0	0.44535	1	37254	37254		18.135	0	1	593130	+		10626	9259	5243	5265	12949	12949					0.09956101625471092
IGPLSLLLIL	10	Unmodified	_IGPLSLLLIL_					0	0	0			REV__ENSG00000133302|ENST00000265140|SLF1	REV__ENSG00000133302|ENST00000265140|SLF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2014037966728	3	351.242366	1050.70527	0.10634	3.7351E-05	2.5441	0.00089361	2.6505	0.00093096	351.24297609811674	23.325	0.70945	24.976	24.467	25.177	1.6511					33	22	2	0	0	0	0.12559	1	9600	9600		0.15932	0	1	443610	+		10627	9874	5244	5266	12950	12950					0.18194411107424457
IGRKHDNL	8	Unmodified	_IGRKHDNL_					0	0	0			REV__tr|A0A7D6W1F1|A0A7D6W1F1_9CLOTUronateisomeraseOS=ClostridiumintestinaleOX=36845GN=uxaCPE=3SV=1	REV__tr|A0A7D6W1F1|A0A7D6W1F1_9CLOTUronateisomeraseOS=ClostridiumintestinaleOX=36845GN=uxaCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1997253298759	2	476.769783	951.525013	3.7153	0.0017713	-1.4336	-0.00068349	2.2817	0.0010878	476.76931818003567	81.687	0.37089	82.92	82.718	83.089	1.2332					20	11	2	0	0	0	2.3239	1	34244	34244		0.79363	0	1	1346200	+		10628	15591	5245	5267	12951	12951					0.047311252231338585
IGRLQGEIRKV	11	Unmodified	_IGRLQGEIRKV_					0	0	0			REV__tr|A0A553SU34|A0A553SU34_NIACIMetal-sensitivetranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06190PE=4SV=1	REV__tr|A0A553SU34|A0A553SU34_NIACIMetal-sensitivetranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.5990173220634	3	423.598094	1267.77245	0.93723	0.00039701	0.076208	3.2282E-05	1.0134	0.00042929	423.59812200535475	94.407	0.58418	94.407	94.087	94.671	0					63	17	5	0	0	0	1.0362	1	39383	39383		1.3296	0.11481	1	35375000	+		10629	15278	5246	5268	12952	12952					0.1492783437104208
IGRNIARPWKL	11	Unmodified	_IGRNIARPWKL_					0	0	0		ENSG00000125482|ENST00000334270|TTF1	ENSG00000125482|ENST00000334270|TTF1	ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2075378298759	4	331.705657	1322.79352	1.1785	0.00039091	1.489	0.00049393	2.6675	0.00088483	332.2068400206555	46.01	1.7584	46.339	45.724	47.482	0.32899					138	58	3	0	0	0	1.039	1	19472	19472		0.45452	0.29519	1	5569000			10630	2262	5247	5269	12953	12953					0.14503844470573313
IGRVIAKKAKR	11	Unmodified	_IGRVIAKKAKR_					0	0	0		tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4239990115166	2	620.422231	1238.82991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.224	1	84.224	83.724	84.724	0								0	0	0	0.63775	1	35099	35099		1.3295	0.87119	1				10631	17327	5248	5270	12954	12954					0.2200472136728422
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	786.4740478396416	1	786.47198	785.464704	2.2741	0.0017885	-0.17033	-0.00013396	2.1038	0.0016546	786.4716230480592	64.146	0.33909	65.553	65.401	65.74	1.4071					17	10	2	0	0	0	0.028763	1	26901	26901		89.427	15.03	1	1523300	+		10632	14558	5249	5271	12955	12955					0.06339014840034451
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	786.4756347537041	1	786.47198	785.464704	2.4006	0.001888	0.0084111	6.6151E-06	2.409	0.0018946	786.4718016506214	63.616	0.30835	65.561	65.441	65.75	1.9444					17	9	2	0	0	0	0.02596	1	26694	26694		93.883	15.439	1	1650600	+		10633	14558	5249	5271	12956	12956					0.06339014840034451
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	786.47198	785.464704	1.8394	0.0014466	-0.39298	-0.00030906	1.4464	0.0011376	786.4714192884007	65.797	0.25557	65.797	65.644	65.9	0	0.14661	-0.00013117	NaN	93.883	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522790	+		10634	14558	5249	5271							0.06339014840034451
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	786.47198	785.464704	1.9181	0.0015085	-0.64878	-0.00051024	1.2693	0.00099829	786.4713371980562	65.363	0.22332	65.69	65.517	65.74	0.32689	0.039729	-0.00033235	NaN	93.883	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572280	+		10635	14558	5249	5271							0.06339014840034451
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	786.47198	785.464704	2.2741	0.0017885	-0.17033	-0.00013396	2.1038	0.0016546	786.4716230480592	64.146	0.33909	65.553	65.401	65.74	1.4071	-0.096992	4.3936E-05	NaN	93.883	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1523300	+		10636	14558	5249	5271							0.06339014840034451
IGSGIIAGV	9	Unmodified	_IGSGIIAGV_					0	0	0			REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	REV__nc|ENSG00000260727|Q8MH63|SLC7A5P1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	786.47198	785.464704	2.4006	0.001888	0.0084111	6.6151E-06	2.409	0.0018946	786.4718016506214	63.616	0.30835	65.561	65.441	65.75	1.9444	-0.089349	0.00018451	NaN	93.883	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1650600	+		10637	14558	5249	5271							0.06339014840034451
IGSILGGG	8	Unmodified	_IGSILGGG_					0	0	0			REV__tr|A0A7D6ZX11|A0A7D6ZX11_9CLOTL-threoninedehydratasecatabolicTdcBOS=ClostridiumintestinaleOX=36845GN=HZF06_20320PE=3SV=1	REV__tr|A0A7D6ZX11|A0A7D6ZX11_9CLOTL-threoninedehydratasecatabolicTdcBOS=ClostridiumintestinaleOX=36845GN=HZF06_20320PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1971618533134	2	337.197596	672.38064	-2.779	-0.00093706	3.3668	0.0011353	0.58781	0.00019821	337.1986537995666	14.98	0.53038	14.98	14.812	15.342	0					27	16	2	0	0	0	0.87106	1	6257	6257		14.582	0	1	602360	+		10638	15754	5250	5272	12957	12957					0.031344837431561245
IGSILGGG	8	Unmodified	_IGSILGGG_					0	0	0			REV__tr|A0A7D6ZX11|A0A7D6ZX11_9CLOTL-threoninedehydratasecatabolicTdcBOS=ClostridiumintestinaleOX=36845GN=HZF06_20320PE=3SV=1	REV__tr|A0A7D6ZX11|A0A7D6ZX11_9CLOTL-threoninedehydratasecatabolicTdcBOS=ClostridiumintestinaleOX=36845GN=HZF06_20320PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	337.197596	672.38064	-2.779	-0.00093706	3.3668	0.0011353	0.58781	0.00019821	337.1986537995666	14.98	0.53038	14.98	14.812	15.342	0	0	0	NaN	14.582	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602360	+		10639	15754	5250	5272							0.031344837431561245
IGSLSIVLD	9	Unmodified	_IGSLSIVLD_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	916.5358154177666	1	916.534975	915.527698	2.7411	0.0025123	-2.2379	-0.0020511	0.50316	0.00046116	916.5320422960476	93.907	0.34943	94.052	93.815	94.165	0.14493					16	10	2	0	0	0	0.11478	1	39292	39292		44.407	2.3125	1	681020	+		10640	11425	5251	5273	12958	12958					0.06655535837421667
IGTGPAVTDSR	11	Unmodified	_IGTGPAVTDSR_					0	0	0			REV__ENSG00000101138|ENST00000217109|CSTF1	REV__ENSG00000101138|ENST00000217109|CSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1073.565112292767	1	1073.55856	1072.55129	2.5041	0.0026883	2.8315	0.0030397	5.3356	0.005728	1073.5600815425846	84.994	0.30769	86.153	85.964	86.271	1.159					18	9	3	0	0	0	0.77451	1	35636	35636		16.149	0.30192	1	5304400	+		10641	9024	5252	5274	12959	12959					0.017913496039454913
IGTGPAVTDSR	11	Unmodified	_IGTGPAVTDSR_					0	0	0			REV__ENSG00000101138|ENST00000217109|CSTF1	REV__ENSG00000101138|ENST00000217109|CSTF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1073.55856	1072.55129	2.5041	0.0026883	2.8315	0.0030397	5.3356	0.005728	1073.5600815425846	84.994	0.30769	86.153	85.964	86.271	1.159	0.051786	-3.0894E-05	NaN	16.149	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5304400	+		10642	9024	5252	5274							0.017913496039454913
IGTGPAVTDSR	11	Unmodified	_IGTGPAVTDSR_					0	0	0			REV__ENSG00000101138|ENST00000217109|CSTF1	REV__ENSG00000101138|ENST00000217109|CSTF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1073.55856	1072.55129	2.7689	0.0029726	2.9148	0.0031292	5.6837	0.0061018	1073.5605171293987	84.453	0.18041	86.049	85.945	86.126	1.5962	-0.051786	5.8553E-05	NaN	16.149	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4031500	+		10643	9024	5252	5274							0.017913496039454913
IGTYFRVAPQ	10	Unmodified	_IGTYFRVAPQ_					0	0	0		nc|ENSG00000182544|Q6N075-2|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3151122927666	2	576.314023	1150.61349	0.39455	0.00022739	-2.0055	-0.0011558	-1.611	-0.00092842	576.3128609386288	19.377	0.35479	20.901	20.753	21.108	1.5237					23	11	3	0	0	0	0.85124	1	8050	8050		6.7232	0	1	841280			10644	7941	5253	5275	12960	12960					0.04421120742927087
IGVDEFVVI	9	Unmodified	_IGVDEFVVI_					0	0	0		tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	990.5532714724541	1	990.550625	989.543348	2.0567	0.0020373	0.061098	6.0521E-05	2.1178	0.0020978	990.5507019058574	81.901	0.54465	81.901	81.701	82.246	0					24	17	2	0	0	0	0.11478	2	34107	34107;34159		44.407	2.3125	1	1728600			10645	17270	5254	5276	12961;12962	12961					0.04815822354487409
IGVDEFVVI	9	Unmodified	_IGVDEFVVI_					0	0	0		tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	990.5488159060478	1	990.550625	989.543348	2.2103	0.0021894	-1.3088	-0.0012964	0.9015	0.00089298	990.5492985348578	81.466	0.39386	81.746	81.574	81.968	0.2802					20	12	2	0	0	0	0.087207	1	34039	34039		53.576	2.7205	1	2002600			10646	17270	5254	5276	12963	12963					0.04815822354487409
IGVDEFVVI	9	Unmodified	_IGVDEFVVI_					0	0	0		tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	tr|A0A7D7A327|A0A7D7A327_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	990.5526611208916	1	990.550625	989.543348	4.1268	0.0040878	-0.75875	-0.00075158	3.3681	0.0033363	990.5498117771792	80.574	0.67356	81.825	81.357	82.03	1.2512					33	21	2	0	0	0	0.087207	1	33816	33816		53.576	2.7205	1	3459200			10647	17270	5254	5276	12964	12964					0.04815822354487409
IGVDFALKV	9	Unmodified	_IGVDFALKV_					0	0	0		ENSG00000123892|ENST00000243662|RAB38;ENSG00000118508|ENST00000367495|RAB32	ENSG00000123892|ENST00000243662|RAB38	ENSG00000123892|ENST00000243662|RAB38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2910339236259	2	481.289485	960.564418	3.1961	0.0015383	-1.5362	-0.00073934	1.66	0.00079892	481.28820439057614	60.519	0.90627	61.939	61.566	62.473	1.4196					54	28	3	0	0	0	0.0058174	4	25379	25331;25379;25434;25515		118.89	48.362	1	7201900			10648	2038	5255	5277	12965;12966;12967;12968	12966					0.08255832453994572
IGVDFALKV	9	Unmodified	_IGVDFALKV_					0	0	0		ENSG00000123892|ENST00000243662|RAB38;ENSG00000118508|ENST00000367495|RAB32	ENSG00000123892|ENST00000243662|RAB38	ENSG00000123892|ENST00000243662|RAB38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2909423708916	2	481.289485	960.564418	2.9735	0.0014311	-0.57148	-0.00027505	2.402	0.0011561	481.288674810885	60	0.75308	61.969	61.733	62.486	1.969					43	23	3	0	0	0	0.024001	3	25145	25145;25192;25239		96.111	48.362	1	7175600			10649	2038	5255	5277	12969;12970;12971	12969					0.08255832453994572
IGVEHVVVY	9	Unmodified	_IGVEHVVVY_					0	0	0		ENSG00000178952|ENST00000313511|TUFM	ENSG00000178952|ENST00000313511|TUFM	ENSG00000178952|ENST00000313511|TUFM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7848083376884	2	507.784567	1013.55458	0.58709	0.00029812	-0.21288	-0.0001081	0.37421	0.00019002	507.78449596504254	36.978	0.34231	38.254	38.05	38.393	1.2762					39	23	2	0	0	0	0.03795	2	15535	15494;15535		77.984	49.497	1	10915000			10650	4497	5256	5278	12972;12973	12973					0.04834644448612835
IGVEHVVVY	9	Unmodified	_IGVEHVVVY_					0	0	0		ENSG00000178952|ENST00000313511|TUFM	ENSG00000178952|ENST00000313511|TUFM	ENSG00000178952|ENST00000313511|TUFM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7846252322197	2	507.784567	1013.55458	0.87736	0.00044551	-0.39834	-0.00020227	0.47902	0.00024324	507.783907761076	36.396	0.27743	38.213	38.045	38.323	1.8176					43	23	2	0	0	0	0.028763	2	15266	15226;15266		89.427	53.383	1	12665000			10651	4497	5256	5278	12974;12975	12975					0.04834644448612835
IGVEKKEGYVL	11	Unmodified	_IGVEKKEGYVL_					0	0	0		nc|ENSG00000154864|Q9H5I5-2|PIEZO2;nc|ENSG00000154864|Q9H5I5|PIEZO2;nc|ENSG00000154864|Q9H5I5-4|PIEZO2;ENSG00000154864|ENST00000674853|PIEZO2	nc|ENSG00000154864|Q9H5I5-2|PIEZO2	nc|ENSG00000154864|Q9H5I5-2|PIEZO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8577758669853	2	617.855721	1233.69689	2.3505	0.0014523	0.33826	0.000209	2.6888	0.0016613	617.8558836067618	73.141	0.31732	74.951	74.797	75.114	1.8101					22	9	3	0	0	0	0.88318	1	30709	30709		10.824	0.75	1	2216000			10652	3400	5257	5279	12976	12976					0.08938812400128882
IGYLKAEEVL	10	Unmodified	_IGYLKAEEVL_					0	0	0			REV__ENST00000509696.5_1_4:7062591-7066009:-|nuORF	REV__ENST00000509696.5_1_4:7062591-7066009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8234130740166	2	567.823889	1133.63323	2.2292	0.0012658	-3.8557	-0.0021894	-1.6265	-0.00092359	567.8228100357514	72.137	0.50137	73.468	73.143	73.644	1.331					25	15	2	0	0	0	0.6819	1	30272	30272		19.257	2.1441	1	1224900	+		10653	9273	5258	5280	12977	12977					0.07175451963030355
IGYLKAEEVL	10	Unmodified	_IGYLKAEEVL_					0	0	0			REV__ENST00000509696.5_1_4:7062591-7066009:-|nuORF	REV__ENST00000509696.5_1_4:7062591-7066009:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8223754763603	2	567.823889	1133.63323	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.625	1	73.449	72.949	73.949	1.824								0	0	0	0.64816	1	30048	30048		15.847	1.9411	1		+		10654	9273	5258	5280	12978	12978					0.07175451963030355
IHALEETIL	9	Unmodified	_IHALEETIL_					0	0	0		nc|ENSG00000117859|Q96SU4-7|OSBPL9;nc|ENSG00000117859|Q96SU4-2|OSBPL9;ENSG00000117859|ENST00000428468|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;OSBPL9|p.Q117Rfs*13|1|0.13|ENSG00000117859|chr1:51745564-51745576|TCCAAGATTTTGA/-|frameshift_variant	nc|ENSG00000117859|Q96SU4-7|OSBPL9	nc|ENSG00000117859|Q96SU4-7|OSBPL9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1400024294853	2	519.795132	1037.57571	2.313	0.0012023	1.3046	0.00067814	3.6176	0.0018804	519.7949580431635	60.819	0.2535	61.147	60.98	61.234	0.32809					11	7	2	0	0	0	0.116	1	25442	25442		9.3474	0	1	557510			10655	2024	5259	5281	12979	12979					0.05842609757473838
IHFRIVEIVV	10	Unmodified	_IHFRIVEIVV_					0	0	0		nc|ENSG00000168594|Q9UKF5-2|ADAM29;nc|ENSG00000168594|Q9UKF5-3|ADAM29;ENSG00000168594|ENST00000359240|ADAM29	nc|ENSG00000168594|Q9UKF5-2|ADAM29	nc|ENSG00000168594|Q9UKF5-2|ADAM29	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.9227783083916	3	408.920286	1223.73903	3.2781	0.0013405	3.2194	0.0013165	6.4975	0.002657	408.92148584637783	91.366	0.55666	92.732	92.406	92.963	1.366					57	17	4	0	0	0	0.89803	1	38488	38488		0.69767	0.07084	1	15548000			10656	4043	5260	5282	12980	12980					0.13610832599169953
IHFVVLAY	8	Unmodified	_IHFVVLAY_					0	0	0			REV__sp|P09720|US13_HCMVAUncharacterizedproteinHVLF5OS=Humancytomegalovirus(strainAD169)OX=10360GN=US13PE=3SV=1	REV__sp|P09720|US13_HCMVAUncharacterizedproteinHVLF5OS=Humancytomegalovirus(strainAD169)OX=10360GN=US13PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2799865603447	2	481.278921	960.543289	2.7024	0.0013006	2.9878	0.001438	5.6902	0.0027386	481.28000943754137	78.294	0.42382	79.561	79.363	79.787	1.2668					37	13	4	0	0	0	0.88958	1	32833	32833		2.8892	0	1	10383000	+		10657	14635	5261	5283	12981	12981					0.06143867145146942
IHGKRRRV	8	Unmodified	_IHGKRRRV_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3277770876884	2	511.328134	1020.64171	1.4928	0.00076333	-3.14	-0.0016056	-1.6472	-0.00084224	511.32701290936313	80.232	0.60221	81.948	81.568	82.17	1.7167					70	19	6	0	0	0	0.88958	1	33684	33684		2.8892	0.31174	1	81153000	+		10658	15604	5262	5284	12982	12982					0.13221908233549584
IHIPSLKDRF	10	Unmodified	_IHIPSLKDRF_					0	0	0			REV__ENST00000552564.5_1_12:54794620-54797174:-|nuORF	REV__ENST00000552564.5_1_12:54794620-54797174:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	612.8544799685478	2	613.356222	1224.69789	2.6003	0.0015949	-0.54244	-0.00033271	2.0579	0.0012622	613.3556312051796	84.76	0.3345	86.356	86.126	86.46	1.5962					22	10	3	0	0	0	0.11852	1	35542	35542		25.399	6.1423	1	7940100	+		10659	10622	5263	5285	12983	12983					0.09453071559687487
IHKRVLLYLL	10	Unmodified	_IHKRVLLYLL_					0	0	0			REV__ENSG00000180758|ENST00000377411|GPR157	REV__ENSG00000180758|ENST00000377411|GPR157	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4150268435478	2	634.416083	1266.81761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.8	1	107.8	107.3	108.3	0								0	0	0	0.66052	1	46299	46299		3.5965	2.1146	1		+		10660	11303	5264	5286	12984	12984					0.1948768490431121
IHKRVLLYLL	10	Unmodified	_IHKRVLLYLL_					0	0	0			REV__ENSG00000180758|ENST00000377411|GPR157	REV__ENSG00000180758|ENST00000377411|GPR157	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4160034060478	2	634.416083	1266.81761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.92	1	107.92	107.42	108.42	0								0	0	0	0.65836	1	46389	46389		6.7232	5.2413	1		+		10661	11303	5264	5286	12985	12985					0.1948768490431121
IHKVVINNS	9	Unmodified	_IHKVVINNS_					0	0	0		nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4;nc|ENSG00000080802|O95628-5|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.3048583865166	2	512.300916	1022.58728	3.6483	0.001869	3.8163	0.0019551	7.4646	0.0038241	512.3030931386464	103.43	0.12411	103.61	103.56	103.68	0.18066					8	5	3	0	0	0	0.83753	1	43553	43553		1.8442	0.36234	1	104710000			10662	1008	5265	5287	12986	12986					0.07688851571481337
IHLILRGLL	9	Unmodified	_IHLILRGLL_					0	0	0			REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1048.721362292767	1	1047.70371	1046.69644	0.30026	0.00031458	3.2173	0.0033708	3.5176	0.0036854	1047.7060716106164	34.889	0.04974	36.163	36.126	36.176	1.2746					5	3	2	0	0	0	0.84963	1	14634	14634		0.6015	0	1	8160800	+		10663	11420	5266	5288	12987	12987					0.17495482261620054
IHLKARGR	8	Unmodified	_IHLKARGR_					0	0	0			REV__CDC37|p.R270H|1|0.13|ENSG00000105401|chr19:10393359-10393359|C/T|missense_variant	REV__CDC37|p.R270H|1|0.13|ENSG00000105401|chr19:10393359-10393359|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	475.8047973513603	2	475.80396	949.593367	3.387	0.0016115	0.42449	0.00020197	3.8115	0.0018135	475.8032116118347	106.1	0.1594	106.26	106.19	106.34	0.16174					23	8	4	0	0	0	0.89051	1	45304	45304		2.3027	0	1	89726000	+		10664	8191	5267	5289	12988	12988					0.11655414593656133
IHLKFLLKLK	10	Unmodified	_IHLKFLLKLK_					0	0	0			REV__ENSG00000133138|ENST00000357242|TBC1D8B	REV__ENSG00000133138|ENST00000357242|TBC1D8B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1253.652026355267	1	1252.85038	1251.8431	1.6232	0.0020336	-3.3092	-0.0041459	-1.686	-0.0021123	1253.8489146674526	35.428	0.06089	35.428	35.402	35.462	0					6	4	2	0	0	0	0.12554	1	14845	14845		1.8442	0	1	5746100	+		10665	9872	5268	5290	12989	12989					0.22725159426681785
IHLLGLKDK	9	Unmodified	_IHLLGLKDK_					0	0	0		tr|A0A553SHN7|A0A553SHN7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=walKPE=4SV=1	tr|A0A553SHN7|A0A553SHN7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=walKPE=4SV=1	tr|A0A553SHN7|A0A553SHN7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=walKPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2234985232353	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.717	1	91.699	91.199	92.199	0.98157								0	0	0	0.42693	1	38217	38217		0.26902	0	1				10666	16165	5269	5291	12990	12990					0.12766899127996112
IHLMALLNRF	10	Unmodified	_IHLMALLNRF_					0	0	0			REV__ENST00000497851.1_1_7:11075344-11076425:+|nuORF	REV__ENST00000497851.1_1_7:11075344-11076425:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	409.8667480349541	3	409.905871	1226.69578	1.067	0.00043737	-2.536	-0.0010395	-1.469	-0.00060216	410.2388554591652	48.523	0.33558	49.911	49.774	50.109	1.388					17	10	2	0	0	0	0.12532	1	20267	20267		3.8763	0	1	769190	+		10667	13483	5270	5292	12991	12991					0.09150319550235508
IHLPLPRSVPL	11	Unmodified	_IHLPLPRSVPL_					0	0	0		nc|ENSG00000170291|Q8TE02-3|ELP5	nc|ENSG00000170291|Q8TE02-3|ELP5	nc|ENSG00000170291|Q8TE02-3|ELP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.3932372927666	2	621.390065	1240.76558	3.8538	0.0023947	2.1534	0.0013381	6.0072	0.0037328	621.3913543517785	91.666	0.49023	92.602	92.34	92.83	0.93623					47	15	4	0	0	0	1.0084	2	38610	38610;38667		3.2813	1.6287	1	12629000			10668	7924	5271	5293	12992;12993	12992					0.1548252149052587
IHLPLPRSVPL	11	Unmodified	_IHLPLPRSVPL_					0	0	0		nc|ENSG00000170291|Q8TE02-3|ELP5	nc|ENSG00000170291|Q8TE02-3|ELP5	nc|ENSG00000170291|Q8TE02-3|ELP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3935424685478	2	621.390065	1240.76558	2.9523	0.0018346	3.3568	0.0020859	6.3091	0.0039204	621.3920755885956	91.335	0.4286	92.701	92.438	92.867	1.366					38	13	3	0	0	0	1.0084	1	38482	38482		3.2813	1.4371	1	10777000			10669	7924	5271	5293	12994	12994					0.1548252149052587
IHLRYNSLAII	11	Unmodified	_IHLRYNSLAII_					0	0	0			REV__ENST00000415511.1_1_22:30367048-30387510:+|nuORF	REV__ENST00000415511.1_1_22:30367048-30387510:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8920776247978	2	656.890429	1311.76631	2.7165	0.0017844	-1.71	-0.0011233	1.0065	0.00066117	656.8893176713786	74.988	0.4657	76.77	76.543	77.009	1.7817					48	14	5	0	0	0	0.34699	1	31401	31401		28.495	0	1	16604000	+		10670	8983	5272	5294	12995	12995					0.12289316139572293
IHMLPSAP	8	Unmodified	_IHMLPSAP_					0	0	0			REV__ENST00000539049.5_1_12:31242373-31253526:+|nuORF	REV__ENST00000539049.5_1_12:31242373-31253526:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2354003787041	2	433.233656	864.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.791	1	48.791	48.291	49.291	0								0	0	0	1.0178	1	20373	20373		6.3541	0	1		+		10671	8543	5273	5295	12996	12996					0.015110748252141093
IHNKKLEK	8	Unmodified	_IHNKKLEK_					0	0	0			REV__tr|A0A7D6VQJ2|A0A7D6VQJ2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_03515PE=4SV=1	REV__tr|A0A7D6VQJ2|A0A7D6VQJ2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_03515PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.3122131228447	2	505.311284	1008.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.083	1	33.378	32.878	33.878	0.29431								0	0	0	1.0178	1	13892	13892		2.5775	0.27475	1		+		10672	15386	5274	5296	12997	12997					0.10405441951138528
IHPDSIVVL	9	Unmodified	_IHPDSIVVL_					0	0	0			REV__ENSG00000214013|ENST00000318010|GANC	REV__ENSG00000214013|ENST00000318010|GANC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7951232790947	2	496.792392	991.570232	2.3015	0.0011434	1.3183	0.00065494	3.6198	0.0017983	496.7933614239979	39.432	0.44947	40.734	40.48	40.93	1.3014					22	14	2	0	0	0	0.34572	1	16505	16505		23.148	2.2772	1	2070200	+		10673	11846	5275	5297	12998	12998					0.07410930965670559
IHPPIYLP	8	Unmodified	_IHPPIYLP_					0	0	0		ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	ENST00000280800.4_1_12:113827935-113828904:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	948.7191650271416	1	949.550565	948.543289	1.1663	0.0011075	-1.0249	-0.0009732	0.14138	0.00013425	949.5493274010842	107.77	0.15671	107.77	107.67	107.82	0					24	8	4	0	0	0	2.3239	1	46211	46211		0.79363	0	1	53860000			10674	5697	5276	5298	12999	12999					0.06695867145117518
IHRGWLCIEGI	11	Unmodified	_IHRGWLCIEGI_					0	0	0			REV__nc|ENSG00000130377|Q5FVE4-4|ACSBG2	REV__nc|ENSG00000130377|Q5FVE4-4|ACSBG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.9271423220634	4	324.927492	1295.68086	-2.0505	-0.00066628	1.2463	0.00040495	-0.80427	-0.00026133	324.9278691784226	42.09	0.68799	42.09	41.821	42.509	0					68	21	4	0	0	0	0.84637	1	17619	17619		7.0371	1.1689	1	25817000	+		10675	9784	5277	5299	13000	13000					0.04484827682222203
IHRIDRTA	8	Unmodified	_IHRIDRTA_					0	0	0		ENSG00000120800|ENST00000261637|UTP20;ENST00000551825.1_1_12:101673946-101684681:+|nuORF	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2864562869072	2	491.283057	980.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.02	1	108.18	107.68	108.68	0.15781								0	0	0	1.0178	1	46616	46616		2.5775	0	1				10676	2118	5278	5300	13001	13001					0.06050814114473724
IHRLQFTILR	10	Unmodified	_IHRLQFTILR_					0	0	0			REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	REV__nc|ENSG00000197323|Q9UPN9-2|TRIM33	MSMS	GG20161007_CRH_Patient100_W632_02	4	648.9006225466728	2	648.898589	1295.78262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.086	1	96.274	95.774	96.774	1.1887								0	0	0	0.66166	1	40007	40007		1.6526	0.45928	1		+		10677	11669	5279	5301	13002	13002					0.1465644209633865
IHRMFLLRVKL	11	Unmodified	_IHRMFLLRVKL_					0	0	0		nc|ENSG00000275835|Q96RT8-2|TUBGCP5;ENSG00000275835|ENST00000615383|TUBGCP5	nc|ENSG00000275835|Q96RT8-2|TUBGCP5	nc|ENSG00000275835|Q96RT8-2|TUBGCP5	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4416992068291	2	713.447391	1424.88023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.66	1	116.81	116.31	117.31	0.15228								0	0	0	0.63775	1	50410	50410		0.35063	0	1				10678	5464	5280	5302	13003	13003					0.1847850770079731
IHRQGKRVGWS	11	Unmodified	_IHRQGKRVGWS_					0	0	0			REV__nc|ENSG00000145990|Q9NXC2-3|GFOD1	REV__nc|ENSG00000145990|Q9NXC2-3|GFOD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	662.3759033083916	2	662.373269	1322.73199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.34	1	87.467	86.967	87.967	1.1265								0	0	0	0.63775	1	36367	36367		1.3295	0	1		+		10679	14455	5281	5303	13004	13004					0.08352912771329102
IHRRLHLTKR	10	Unmodified	_IHRRLHLTKR_					0	0	0		ENST00000527561.5_1_8:144766681-144776697:+|nuORF;ENST00000532486.5_1_8:144774355-144776697:+|nuORF;ENSG00000181135|ENST00000358656|ZNF707	ENST00000527561.5_1_8:144766681-144776697:+|nuORF	ENST00000527561.5_1_8:144766681-144776697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	665.4207031130791	2	665.420554	1328.82655	2.633	0.001752	-3.2205	-0.002143	-0.58755	-0.00039097	665.4178976388522	95.834	0.2779	95.958	95.801	96.079	0.12331					32	9	5	0	0	0	0.89803	1	40132	40132		1.6526	0	1	27195000			10680	4568	5282	5304	13005	13005					0.17529471313287104
IHRRLHLTKR	10	Unmodified	_IHRRLHLTKR_					0	0	0		ENST00000527561.5_1_8:144766681-144776697:+|nuORF;ENST00000532486.5_1_8:144774355-144776697:+|nuORF;ENSG00000181135|ENST00000358656|ZNF707	ENST00000527561.5_1_8:144766681-144776697:+|nuORF	ENST00000527561.5_1_8:144766681-144776697:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	665.420554	1328.82655	1.8742	0.0012471	-4.4514	-0.002962	-2.5772	-0.0017149	665.4172549558137	95.918	0.28997	95.918	95.773	96.063	0	-0.019591	-0.00078674	NaN	1.6526	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22502000			10681	4568	5282	5304							0.17529471313287104
IHRRSKRI	8	Unmodified	_IHRRSKRI_					0	0	0			REV__ENSG00000115602|ENST00000233954|IL1RL1	REV__ENSG00000115602|ENST00000233954|IL1RL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3418456912041	2	533.341241	1064.66793	2.7978	0.0014922	-1.6722	-0.00089184	1.1256	0.00060034	533.3405479462934	83.002	0.58801	84.214	83.92	84.508	1.2125					66	18	5	0	0	0	0.88958	1	34815	34815		2.8892	0	1	42754000	+		10682	9446	5283	5305	13006	13006					0.1381817740502811
IHTKRNTA	8	Unmodified	_IHTKRNTA_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1807739138603	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.587	1	16.587	16.087	17.087	0								0	0	0	1.0178	1	6886	6886		0.45834	0	1		+		10683	11441	5284	5306	13007	13007					0.05283125223127172
IHTKRNTA	8	Unmodified	_IHTKRNTA_					0	0	0			REV__ENSG00000185010|ENST00000360256|F8	REV__ENSG00000185010|ENST00000360256|F8	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1805297732353	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.899	1	16.899	16.399	17.399	0								0	0	0	1.0178	1	7014	7014		0.45834	0	1		+		10684	11441	5284	5306	13008	13008					0.05283125223127172
IHTSILVIR	9	Unmodified	_IHTSILVIR_					0	0	0			REV__tr|A0A7D7AFS5|A0A7D7AFS5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06800PE=4SV=1	REV__tr|A0A7D7AFS5|A0A7D7AFS5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06800PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3361083865166	2	526.334759	1050.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.192	1	52.169	51.669	52.669	1.9772								0	0	0	0.29347	1	21024	21024		19.257	1.1106	1		+		10685	15919	5285	5307	13009	13009					0.13166301502246824
IHWMIRRKV	9	Unmodified	_IHWMIRRKV_					0	0	0			REV__ENSG00000181291|ENST00000631683|TMEM132E	REV__ENSG00000181291|ENST00000631683|TMEM132E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8705932497978	2	619.868777	1237.723	2.1274	0.0013187	0.71699	0.00044444	2.8444	0.0017632	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	0.84531	1	32236	32236		0.6015	0	1	3039400	+		10686	11320	5286	5308	13010	13010					0.11364847881282003
IHWMIRRKV	9	Unmodified	_IHWMIRRKV_					0	0	0			REV__ENSG00000181291|ENST00000631683|TMEM132E	REV__ENSG00000181291|ENST00000631683|TMEM132E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8710815310478	2	619.868777	1237.723	2.3482	0.0014556	1.6314	0.0010113	3.9796	0.0024668	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.84531	1	32627	32627		0.6015	0.25087	1	8928300	+		10687	11320	5286	5308	13011	13011					0.11364847881282003
IIAAIAIPSI	10	Unmodified	_IIAAIAIPSI_					0	0	0		tr|A0A553SK90|A0A553SK90_NIACIPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18350PE=4SV=1	tr|A0A553SK90|A0A553SK90_NIACIPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18350PE=4SV=1	tr|A0A553SK90|A0A553SK90_NIACIPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18350PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3225585818291	2	491.320786	980.627018	2.1667	0.0010645	0.94287	0.00046325	3.1095	0.0015278	491.3213012626748	44.63	0.38527	46.59	46.382	46.767	1.9596					24	11	3	0	0	0	0.28892	1	18674	18674		39.957	0	1	3044800			10688	16276	5287	5309	13012	13012					0.13592978522194699
IIADMDKWTV	10	Unmodified	_IIADMDKWTV_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.3072997927666	2	596.307549	1190.60055	1.4561	0.00086828	-1.3121	-0.00078239	0.14403	8.5884E-05	596.3070619941492	53.931	0.20865	55.332	55.225	55.434	1.4005					13	6	3	0	0	0	0.33708	1	22557	22557		37.075	12.193	1	2018200			10689	5264	5288	5310	13013	13013					0.01286921568521393
IIADMDKWTV	10	Unmodified	_IIADMDKWTV_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.3099243044853	2	596.307549	1190.60055	0.66925	0.00039908	0.27374	0.00016323	0.94299	0.00056231	596.8088833706711	53.461	0.29874	55.431	55.264	55.563	1.9697					16	9	2	0	0	0	0.21129	1	22394	22394		47.594	19.1	1	2357500			10690	5264	5288	5310	13014	13014					0.01286921568521393
IIADTHLFWP	10	Unmodified	_IIADTHLFWP_					0	0	0		LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant;ENSG00000134569|ENST00000378623|LRP4	LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	606.3386718630791	2	606.824224	1211.63389	2.7374	0.0016611	0.75581	0.00045864	3.4932	0.0021198	606.8261016792893	65.43	0.27908	66.829	66.694	66.973	1.3989					16	8	3	0	0	0	0.12484	1	27387	27387		3.9444	0	1	1089900			10691	2623	5289	5311	13015	13015					0.0365429140276774
IIADVDGCDE	10	Unmodified	_IIADVDGCDE_					0	0	0			REV__tr|A0A7D6VSY8|A0A7D6VSY8_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=ldhPE=3SV=1	REV__tr|A0A7D6VSY8|A0A7D6VSY8_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=ldhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.2271606326103	2	525.226422	1048.43829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.556	1	75.878	75.378	76.378	0.32163								0	0	0	0.66031	1	31599	31599		3.9444	1.0552	1		+		10692	15468	5290	5312	13016	13016					-0.08399086904250908
IIAGTPLLLA	10	Unmodified	_IIAGTPLLLA_					0	0	0		tr|A0A7D6ZST1|A0A7D6ZST1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17115PE=4SV=1	tr|A0A7D6ZST1|A0A7D6ZST1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17115PE=4SV=1	tr|A0A7D6ZST1|A0A7D6ZST1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.3221618533134	2	491.320786	980.627018	1.7693	0.00086929	0.77619	0.00038136	2.5455	0.0012507	491.32130913970826	47.356	0.28672	47.356	47.181	47.468	0					11	8	2	0	0	0	0.51515	1	19793	19793		26.884	0.61551	1	847830			10693	17136	5291	5313	13017	13017					0.1359297852218333
IIAIVHIFGKV	11	Unmodified	_IIAIVHIFGKV_					0	0	0		nc|ENSG00000163053|Q7RTX9-2|SLC16A14;ENSG00000163053|ENST00000295190|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.4486266970634	4	303.198405	1208.76451	-2.5261	-0.0007659	1.7971	0.00054487	-0.72898	-0.00022102	303.44962817811614	35.148	0.22374	35.148	34.995	35.219	0					22	15	2	0	0	0	1.0362	1	14693	14693		1.3296	0.70282	1	4497600			10694	3660	5292	5314	13018	13018					0.16848307121586004
IIAIVHIFGKV	11	Unmodified	_IIAIVHIFGKV_					0	0	0		nc|ENSG00000163053|Q7RTX9-2|SLC16A14;ENSG00000163053|ENST00000295190|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1988098025322	4	303.198405	1208.76451	-0.63123	-0.00019139	2.0327	0.00061631	1.4015	0.00042492	303.1990029690568	32.109	0.36208	33.39	33.172	33.534	1.2813					23	12	2	0	0	0	1.0362	1	13476	13476		1.3296	0.46527	1	11202000			10695	3660	5292	5314	13019	13019					0.16848307121586004
IIAIVHIFGKV	11	Unmodified	_IIAIVHIFGKV_					0	0	0		nc|ENSG00000163053|Q7RTX9-2|SLC16A14;ENSG00000163053|ENST00000295190|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1992675662041	4	303.198405	1208.76451	0.14694	4.4551E-05	2.0239	0.00061364	2.1708	0.0006582	303.19895195926824	30.339	0.86665	32.154	31.676	32.543	1.8151					98	27	4	0	0	0	1.0362	3	12786	12657;12697;12786		1.3296	0.45452	1	7320700			10696	3660	5292	5314	13020;13021;13022	13022					0.16848307121586004
IIAIVHIFGKV	11	Unmodified	_IIAIVHIFGKV_					0	0	0		nc|ENSG00000163053|Q7RTX9-2|SLC16A14;ENSG00000163053|ENST00000295190|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	nc|ENSG00000163053|Q7RTX9-2|SLC16A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1987182497978	4	303.198405	1208.76451	0.17423	5.2825E-05	0.66072	0.00020033	0.83495	0.00025316	303.1986481132082	31.148	0.57637	32.972	32.552	33.128	1.8246					66	19	4	0	0	0	1.0357	1	13045	13045		1.4551	0.12547	1	6939100			10697	3660	5292	5314	13023	13023					0.16848307121586004
IIALIWLFHV	10	Unmodified	_IIALIWLFHV_					0	0	0			REV__ENST00000521844.1_1_8:8861643-8861781:+|nuORF	REV__ENST00000521844.1_1_8:8861643-8861781:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.9227477908134	3	408.921627	1223.74305	2.8342	0.0011589	-0.18776	-7.6778E-05	2.6464	0.0010822	408.921480926424	92.381	0.62007	92.549	92.249	92.869	0.16834					68	19	5	0	0	0	0.89803	1	38754	38754		0.15932	0	1	30571000	+		10698	13633	5293	5315	13024	13024					0.14012922092865665
IIALTRNRR	9	Unmodified	_IIALTRNRR_					0	0	0		nc|ENSG00000010539|P98182-3|ZNF200;nc|ENSG00000010539|P98182-2|ZNF200;ENSG00000010539|ENST00000414144|ZNF200;ENST00000575285.1_1_16:3273894-3274698:-|nuORF	nc|ENSG00000010539|P98182-3|ZNF200	nc|ENSG00000010539|P98182-3|ZNF200	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1013366580009	3	371.57188	1111.69381	-0.42854	-0.00015923	-3.5363	-0.001314	-3.9649	-0.0014732	371.57047624646464	80.722	0.59216	80.722	80.417	81.009	0					39	18	3	0	0	0	0.11941	1	33636	33636		1.0715	0.8646	1	1731000			10699	555	5294	5316	13025	13025					0.14243026856661345
IIAMKKNV	8	Unmodified	_IIAMKKNV_					0	0	0		nc|ENSG00000198000|Q76FK4-2|NOL8;nc|ENSG00000198000|Q76FK4-4|NOL8;ENSG00000198000|ENST00000442668|NOL8	nc|ENSG00000198000|Q76FK4-2|NOL8	nc|ENSG00000198000|Q76FK4-2|NOL8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.7887756228447	2	458.786056	915.557558	1.9742	0.00090574	2.8126	0.0012904	4.7868	0.0021961	458.78727477786623	76.301	1.3716	76.301	75.723	77.095	0					120	43	6	0	0	0	0.88261	1	31688	31688		10.183	1.5901	1	382510000			10700	5035	5295	5317	13026	13026					0.09640196301768356
IIAPPERK	8	Unmodified	_IIAPPERK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	308.5277282595634	3	308.527277	922.560001	-1.4189	-0.00043775	0.98435	0.0003037	-0.4345	-0.00013406	308.52768387459196	12.697	0.21542	13.391	13.257	13.473	0.69396					15	6	4	0	0	0	0.55531	1	5254	5254		36.506	7.4246	1	15724000			10701	937	5296	5318	13027	13027					0.09562368031083679
IIAPPERK	8	Unmodified	_IIAPPERK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1454345583916	2	462.287277	922.560001	0.044871	2.0743E-05	0.51365	0.00023745	0.55852	0.0002582	462.28748023746294	12.697	0.12651	13.391	13.315	13.441	0.69396					8	3	3	0	0	0	2.3239	1	5273	5273		5.2307	4.5403	1	1939800			10702	937	5296	5318	13028	13028					0.09562368031083679
IIAPPERK	8	Unmodified	_IIAPPERK_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENST00000415776.1_1_Y:19868883-19869072:-|nuORF;ENST00000493945.5_1_7:5567381-5567853:-|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	308.5271484255791	3	308.527277	922.560001	-0.57618	-0.00017777	0.48006	0.00014811	-0.096119	-2.9655E-05	308.52747440818035	12.44	0.20732	13.228	13.124	13.331	0.78751					16	6	4	0	0	0	0.71199	1	5142	5142		23.79	1.0535	1	10823000			10703	937	5296	5318	13029	13029					0.09562368031083679
IIAQMQKI	8	Unmodified	_IIAQMQKI_					0	0	0		tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7853271365166	2	472.783513	943.552473	3.183	0.0015049	-0.87695	-0.00041461	2.3061	0.0010903	472.7834955067603	87.061	0.32193	87.061	86.864	87.186	0					17	13	2	0	0	0	0.89051	1	36321	36321		2.3027	0	1	7188600			10704	16689	5297	5319	13030	13030					0.07843892439143474
IIAQMQKI	8	Unmodified	_IIAQMQKI_					0	0	0		tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	tr|A0A553SUF6|A0A553SUF6_NIACIAminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_06825PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	472.783513	943.552473	3.3327	0.0015757	-0.0339	-1.6027E-05	3.2988	0.0015596	472.78395139398987	86.89	0.3492	87.133	86.914	87.264	0.24387	0.036194	0.00040117	NaN	2.3027	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6079100			10705	16689	5297	5319							0.07843892439143474
IIARESSSF	9	Unmodified	_IIARESSSF_					0	0	0			REV__tr|A0A553STY6|A0A553STY6_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05980PE=4SV=1	REV__tr|A0A553STY6|A0A553STY6_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05980PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2682678103447	2	505.269281	1008.52401	1.7412	0.00087976	-0.8266	-0.00041766	0.91457	0.00046211	505.2688145991919	68.54	0.37996	70.393	70.088	70.468	1.853					28	11	3	0	0	0	0.21592	1	28745	28745		31.268	1.0435	1	4186600	+		10706	15270	5298	5320	13031	13031					0.02008866063579262
IIASAISAL	9	Unmodified	_IIASAISAL_					0	0	0			REV__tr|A0A553SSX9|A0A553SSX9_NIACIPTSmannose/fructose/sorbosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_04025PE=4SV=1	REV__tr|A0A553SSX9|A0A553SSX9_NIACIPTSmannose/fructose/sorbosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_04025PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	858.5294677615166	1	858.529495	857.522219	1.8755	0.0016101	-1.3338	-0.0011451	0.54162	0.000465	858.5282456209017	66.932	0.21399	67.257	67.127	67.341	0.32449					9	6	2	0	0	0	0.15478	1	28046	28046		38.151	2.107	1	455610	+		10707	15220	5299	5321	13032	13032					0.08775857045600333
IIATGAMPKK	10	Unmodified	_IIATGAMPKK_					0	0	0		tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.3094970583916	2	515.309895	1028.60524	2.209	0.0011383	-2.9478	-0.001519	-0.73883	-0.00038073	515.3086554964119	81.22	1.0047	81.22	80.728	81.733	0					44	32	2	0	0	0	0.89803	1	33748	33748		1.6526	0.85899	1	1064100			10708	17144	5300	5322	13033	13033					0.09207850501957182
IIAVRKLFTA	10	Unmodified	_IIAVRKLFTA_					0	0	0		SLC17A1|p.V333I|1|0.41|ENSG00000124568|chr6:25811671-25811671|C/T|missense_variant	SLC17A1|p.V333I|1|0.41|ENSG00000124568|chr6:25811671-25811671|C/T|missense_variant	SLC17A1|p.V333I|1|0.41|ENSG00000124568|chr6:25811671-25811671|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	566.3664428591728	2	566.366059	1130.71756	0.89126	0.00050478	-0.24868	-0.00014085	0.64258	0.00036394	566.3657179148204	106.04	0.14156	106.04	105.97	106.11	0					18	6	4	0	0	0	0.89803	1	45147	45147		1.6526	0.96225	1	187680000			10709	15957	5301	5323	13034	13034					0.15743447570480384
IIDDAWWF	8	Unmodified	_IIDDAWWF_					0	0	0		BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant;BRWD1|p.V1635Wfs*6|1|0.05|ENSG00000185658|chr21:39199514-39199514|A/-|frameshift_variant;BRWD1|p.Q1709Mfs*18|1|0.17|ENSG00000185658|chr21:39199286-39199292|GCTCTGG/-|frameshift_variant;nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1;ENST00000473691.1_1_X:79938122-79975072:-|nuORF;nc|ENSG00000165288|Q6RI45-5|BRWD3;ENSG00000165288|ENST00000373275|BRWD3;nc|ENSG00000165288|Q6RI45-3|BRWD3;nc|ENSG00000165288|Q6RI45-4|BRWD3;nc|ENSG00000165288|Q6RI45-2|BRWD3	BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant;nc|ENSG00000165288|Q6RI45-5|BRWD3	nc|ENSG00000165288|Q6RI45-5|BRWD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0696288943291	3	355.839521	1064.49673	0.50281	0.00017892	-0.09595	-3.4143E-05	0.40686	0.00014478	356.17355319167353	70.921	0.36146	72.745	72.518	72.88	1.824					22	11	3	0	0	0	2.3239	1	29788	29788		0	0	1	683020			10710	3829;108	5302	5324	13035	13035					-0.03293617476833788
IIDDTIFNL	9	Unmodified	_IIDDTIFNL_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000588867.1_1_18:21114346-21115663:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2877685427666	2	532.28714	1062.55973	2.7069	0.0014409	-0.42029	-0.00022371	2.2866	0.0012171	532.2863278956792	80.061	0.43468	81.312	81.078	81.513	1.2512					37	13	3	0	0	0	0.051699	1	33586	33586		67.344	9.8725	1	2901100			10711	2962	5303	5325	13036	13036					0.03094903520582193
IIDDTIFNL	9	Unmodified	_IIDDTIFNL_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000588867.1_1_18:21114346-21115663:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1063.568164050579	1	1063.567	1062.55973	3.2989	0.0035086	-3.8094	-0.0040516	-0.51056	-0.00054301	1063.5627173437172	80.058	0.27747	81.309	81.14	81.417	1.2512					13	8	2	0	0	0	0.073578	1	33603	33603		58.679	3.9053	1	1453200			10712	2962	5303	5325	13037	13037					0.03094903520582193
IIDDTIFNL	9	Unmodified	_IIDDTIFNL_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000588867.1_1_18:21114346-21115663:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	532.28714	1062.55973	2.0138	0.0010719	-1.127	-0.00059988	0.88681	0.00047204	532.2859819881982	81.334	0.33452	81.334	81.164	81.498	0	0.033532	-0.00054601	NaN	67.344	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1750100			10713	2962	5303	5325							0.03094903520582193
IIDDTIFNL	9	Unmodified	_IIDDTIFNL_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000588867.1_1_18:21114346-21115663:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	532.28714	1062.55973	2.0966	0.001116	-0.72782	-0.00038741	1.3688	0.00072858	532.2860119213695	80.959	0.31077	81.25	81.089	81.4	0.29056	-0.050363	-0.00012107	NaN	67.344	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	948900			10714	2962	5303	5325							0.03094903520582193
IIDDTIFNL	9	Unmodified	_IIDDTIFNL_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000588867.1_1_18:21114346-21115663:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	532.28714	1062.55973	1.8068	0.00096176	-0.51118	-0.0002721	1.2957	0.00068967	532.2863670317024	79.588	0.43125	81.305	81.075	81.506	1.7167	0.0047739	0.00010956	NaN	67.344	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2607100			10715	2962	5303	5325							0.03094903520582193
IIDFSCAIL	9	Unmodified	_IIDFSCAIL_					0	0	0		tr|A0A7D6ZFE3|A0A7D6ZFE3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17595PE=4SV=1	tr|A0A7D6ZFE3|A0A7D6ZFE3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17595PE=4SV=1	tr|A0A7D6ZFE3|A0A7D6ZFE3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7675964236259	2	497.767529	993.520504	3.1123	0.0015492	-1.9977	-0.00099437	1.1147	0.00055484	497.7657441303791	82.661	0.4053	83.874	83.731	84.136	1.2125					27	12	3	0	0	0	0.46905	1	34719	34719		16.942	2.3606	1	1267100			10716	17061	5304	5326	13038	13038					0.023484799653374466
IIDLLQQQRR	10	Unmodified	_IIDLLQQQRR_					0	0	0			REV__tr|A0A553SRY6|A0A553SRY6_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02105PE=4SV=1	REV__tr|A0A553SRY6|A0A553SRY6_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8837768435478	2	641.883136	1281.75172	1.4898	0.00095626	0.79491	0.00051024	2.2847	0.0014665	641.8838270268691	77.925	1.6654	79.677	79.073	80.738	1.7514					106	53	3	0	0	0	0.89803	1	32598	32598		1.4819	0	1	2328100	+		10717	15180	5305	5327	13039	13039					0.12211243991396259
IIDLYFWL	8	Unmodified	_IIDLYFWL_					0	0	0			REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.7988159060478	2	541.799686	1081.58482	1.5252	0.00082635	-0.55497	-0.00030068	0.97023	0.00052567	541.7995167150275	66.59	0.94814	66.59	66.253	67.201	0					89	29	4	0	0	0	0.88409	1	27969	27969		6.3541	1.1234	1	8191400	+		10718	12754	5306	5328	13040	13040					0.04729003113811814
IIDTSMGSL	9	Unmodified	_IIDTSMGSL_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.7404662966728	2	468.738968	935.463383	2.2764	0.001067	1.0633	0.00049839	3.3397	0.0015654	468.73955448201184	56.699	0.26478	56.699	56.546	56.81	0					14	8	2	0	0	0	0.27148	1	23637	23637		26.884	2.6737	1	1899700			10719	7821	5307	5329	13041	13041					-0.0069298731101525846
IIDTSMGSL	9	Unmodified	_IIDTSMGSL_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7395507693291	2	468.738968	935.463383	1.6482	0.00077258	0.05123	2.4014E-05	1.6994	0.0007966	468.7388110853128	55.146	0.25269	56.551	56.444	56.697	1.4048					19	8	3	0	0	0	0.19075	1	23133	23133		34.102	7.2188	1	3765400			10720	7821	5307	5329	13042	13042					-0.0069298731101525846
IIDTSMGSL	9	Unmodified	_IIDTSMGSL_					0	0	0		nc|ENSG00000054523|O60333-2|KIF1B;nc|ENSG00000054523|O60333-3|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	nc|ENSG00000054523|O60333-2|KIF1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	468.738968	935.463383	2.901	0.0013598	1.7941	0.00084095	4.6951	0.0022008	468.7397992160628	56.283	0.25557	56.604	56.531	56.786	0.32103	-0.028351	0.00062139	NaN	34.102	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1429800			10721	7821	5307	5329							-0.0069298731101525846
IIDVPEPPL	9	Unmodified	_IIDVPEPPL_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.7874633669853	2	496.786776	991.558998	1.6556	0.00082249	-2.128	-0.0010572	-0.47236	-0.00023466	496.78536375207835	80.901	0.28027	80.901	80.728	81.009	0					13	8	2	0	0	0	0.20671	1	33673	33673		32.305	3.8186	1	578840	+		10722	11360	5308	5330	13043	13043					0.062881088715244
IIDVPEPPL	9	Unmodified	_IIDVPEPPL_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	496.786776	991.558998	1.6556	0.00082249	-2.128	-0.0010572	-0.47236	-0.00023466	496.78536375207835	80.901	0.28027	80.901	80.728	81.009	0	0.09874	0.00080754	NaN	32.305	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	578840	+		10723	11360	5308	5330							0.062881088715244
IIDVPEPPL	9	Unmodified	_IIDVPEPPL_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	496.786776	991.558998	2.5379	0.0012608	-5.2658	-0.002616	-2.7279	-0.0013552	496.7836484002465	80.413	0.1545	80.704	80.623	80.778	0.29056	-0.09874	-0.0023101	NaN	32.305	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	523590	+		10724	11360	5308	5330							0.062881088715244
IIDYHRYF	8	Unmodified	_IIDYHRYF_					0	0	0		tr|A0A553STE4|A0A553STE4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04860PE=4SV=1	tr|A0A553STE4|A0A553STE4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04860PE=4SV=1	tr|A0A553STE4|A0A553STE4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04860PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.1936523318291	3	376.194186	1125.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.865	1	51.865	51.365	52.365	0								0	0	0	1.0178	1	21630	21630		6.2058	1.3088	1				10725	16647	5309	5331	13044	13044					0.0029716268013544322
IIEDFLEGIEA	11	Unmodified	_IIEDFLEGIEA_					0	0	0		tr|A0A7D6VWR1|A0A7D6VWR1_9CLOTPhosphoribosylamine--glycineligaseOS=ClostridiumintestinaleOX=36845GN=purDPE=3SV=1	tr|A0A7D6VWR1|A0A7D6VWR1_9CLOTPhosphoribosylamine--glycineligaseOS=ClostridiumintestinaleOX=36845GN=purDPE=3SV=1	tr|A0A7D6VWR1|A0A7D6VWR1_9CLOTPhosphoribosylamine--glycineligaseOS=ClostridiumintestinaleOX=36845GN=purDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	624.8242675662041	2	624.821544	1247.62853	2.5575	0.001598	1.2886	0.00080513	3.8461	0.0024031	624.822248403821	92.062	0.48116	92.252	92.014	92.495	0.19042					45	14	4	0	0	0	0.31168	1	38544	38544		31.268	5.869	1	3923200			10726	16978	5310	5332	13045	13045					0.014625230296587688
IIEDTVKFI	9	Unmodified	_IIEDTVKFI_					0	0	0		tr|A0A7D6VTB4|A0A7D6VTB4_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20155PE=4SV=1	tr|A0A7D6VTB4|A0A7D6VTB4_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20155PE=4SV=1	tr|A0A7D6VTB4|A0A7D6VTB4_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20155PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3164550662041	2	539.313158	1076.61176	3.3666	0.0018156	2.5004	0.0013485	5.8669	0.0031641	539.3146721856845	93.781	0.52927	95.058	94.828	95.358	1.277					51	16	4	0	0	0	0.3154	1	39489	39489		24.674	5.2349	1	10377000			10727	16912	5311	5333	13046	13046					0.07652066934338109
IIEEQWAIP	9	Unmodified	_IIEEQWAIP_					0	0	0			REV__ENSG00000114124|ENST00000682958|GRK7	REV__ENSG00000114124|ENST00000682958|GRK7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2191039919853	2	549.795132	1097.57571	2.377	0.0013069	0.4754	0.00026137	2.8524	0.0015682	549.7964916296982	58.01	0.28658	58.333	58.109	58.396	0.32299					16	8	3	0	0	0	0.11787	1	24241	24241		2.3027	0	1	671790	+		10728	9400	5312	5334	13047	13047					0.03082609757461796
IIEGWSVM	8	Unmodified	_IIEGWSVM_					0	0	0		ENST00000570587.5_1_17:7828736-7831185:-|nuORF	ENST00000570587.5_1_17:7828736-7831185:-|nuORF	ENST00000570587.5_1_17:7828736-7831185:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7399474978447	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.87655	1	20942	20942		11.114	0.93107	1	3535400			10729	7393	5313	5335	13048	13048					-0.006403622402103792
IIEKRRHDK	9	Unmodified	_IIEKRRHDK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8571044802666	2	597.856921	1193.69929	2.2076	0.0013198	-1.2712	-0.00076	0.93636	0.00055981	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.77526	1	31411	31411		4.3292	0	1	2856000			10730	3425;7900	5314	5336	13049	13049					0.11018705648439209
IIEWEHLDKKK	11	Unmodified	_IIEWEHLDKKK_					0	0	0		SLC25A44|p.I41Tfs*61|1|0.05|ENSG00000160785|chr1:156199969-156199969|T/-|frameshift_variant;ENSG00000160785|ENST00000359511|SLC25A44	SLC25A44|p.I41Tfs*61|1|0.05|ENSG00000160785|chr1:156199969-156199969|T/-|frameshift_variant	SLC25A44|p.I41Tfs*61|1|0.05|ENSG00000160785|chr1:156199969-156199969|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	480.2946349978447	3	480.273276	1437.798	1.656	0.00079531	0.83667	0.00040183	2.4926	0.0011971	480.6082101194928	49.225	0.65865	51.203	51.068	51.727	1.9772					32	20	3	0	0	0	0.14606	1	20798	20798		1.4551	0	1	962780			10731	3575	5315	5337	13050	13050					0.09661264102805944
IIFDVYQADAV	11	Unmodified	_IIFDVYQADAV_					0	0	0		ENST00000545228.2_1_17:73518583-73520490:+|nuORF;ENSG00000182173|ENST00000333213|TSEN54	ENST00000545228.2_1_17:73518583-73520490:+|nuORF	ENST00000545228.2_1_17:73518583-73520490:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.3266479372978	2	627.324254	1252.63395	2.74	0.0017189	0.76649	0.00048084	3.5065	0.0021997	627.3248560599344	92.492	0.42229	93.819	93.601	94.024	1.3269					34	12	4	0	0	0	0.37492	1	38932	38932		27.629	0	1	5237100			10732	4603	5316	5338	13051	13051					0.017742466120807876
IIFHLHRKAI	10	Unmodified	_IIFHLHRKAI_					0	0	0			REV__ENSG00000180917|ENST00000434935|CMTR2	REV__ENSG00000180917|ENST00000434935|CMTR2	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.3955566287041	2	624.3904	1246.76625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	104.15	103.65	104.65	0.16055								0	0	0	0.66166	1	43971	43971		1.6526	0.17072	1		+		10733	11307	5317	5339	13052	13052					0.15273360930223134
IIFIDPPYL	9	Unmodified	_IIFIDPPYL_					0	0	0		tr|A0A7D7AGZ1|A0A7D7AGZ1_9CLOT16SrRNA(Guanine(966)-N(2))-methyltransferaseRsmDOS=ClostridiumintestinaleOX=36845GN=rsmDPE=4SV=1	tr|A0A7D7AGZ1|A0A7D7AGZ1_9CLOT16SrRNA(Guanine(966)-N(2))-methyltransferaseRsmDOS=ClostridiumintestinaleOX=36845GN=rsmDPE=4SV=1	tr|A0A7D7AGZ1|A0A7D7AGZ1_9CLOT16SrRNA(Guanine(966)-N(2))-methyltransferaseRsmDOS=ClostridiumintestinaleOX=36845GN=rsmDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8143798708916	2	545.812793	1089.61103	3.9905	0.0021781	-0.30071	-0.00016413	3.6898	0.002014	545.8118903867586	90.993	0.25829	91.974	91.781	92.039	0.98156					10	7	2	0	0	0	0.3154	1	38320	38320		24.674	4.2203	1	498340			10734	17344	5318	5340	13053	13053					0.06981272285270279
IIGAITVHPK	10	Unmodified	_IIGAITVHPK_					0	0	0		tr|A0A7D6ZHA5|A0A7D6ZHA5_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22215PE=3SV=1	tr|A0A7D6ZHA5|A0A7D6ZHA5_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22215PE=3SV=1	tr|A0A7D6ZHA5|A0A7D6ZHA5_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22215PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.1812011599541	3	350.221965	1047.64407	1.3879	0.00048609	4.3818	0.0015346	5.7697	0.0020207	350.222081685841	46.643	0.43347	46.973	46.736	47.17	0.33034					21	14	2	0	0	0	0.12559	1	19529	19529		0.77653	0.37582	1	380000			10735	17083	5319	5341	13054	13054					0.12214899127980061
IIGGFSLSSI	10	Unmodified	_IIGGFSLSSI_					0	0	0			REV__tr|A0A7D6VYM8|A0A7D6VYM8_9CLOTCation-transportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16575PE=4SV=1	REV__tr|A0A7D6VYM8|A0A7D6VYM8_9CLOTCation-transportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16575PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2845336794853	2	497.2844	992.554247	1.9265	0.000958	-2.3776	-0.0011823	-0.45114	-0.00022435	497.2829736411484	69.121	0.44843	70.486	70.253	70.701	1.3657					37	14	4	0	0	0	0.15278	1	28960	28960		54.774	0.94076	1	13841000	+		10736	15563	5320	5342	13055	13055					0.057672247287769096
IIGGKAAP	8	Unmodified	_IIGGKAAP_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL	nc|ENSG00000100504|P06737-2|PYGL	nc|ENSG00000100504|P06737-2|PYGL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2535888552666	2	363.729064	725.443575	2.0603	0.00074939	-0.53655	-0.00019516	1.5237	0.00055423	363.72700801217366	61.637	0.4776	63.594	63.274	63.751	1.9571					24	14	2	0	0	0	2.3239	1	25779	25779		0.79363	0	1	890980			10737	1284	5321	5343	13056	13056					0.06987049531176126
IIGTESEVS	9	Unmodified	_IIGTESEVS_					0	0	0			REV__ENST00000508132.1_1_5:31294350-31302435:+|nuORF	REV__ENST00000508132.1_1_5:31294350-31302435:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7397949099541	2	467.740022	933.465492	2.0444	0.00095626	-2.3802	-0.0011133	-0.33578	-0.00015706	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.66839	1	19882	19882		8.5933	0	1	3535400	+		10738	9380	5322	5344	13057	13057					-0.003902353015632798
IIGTILVLI	9	Unmodified	_IIGTILVLI_					0	0	0			REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	477.8332397341728	2	477.833529	953.652505	1.6811	0.00080328	-1.6863	-0.00080577	-0.0052209	-2.4947E-06	477.83263492416904	98.434	0.15048	98.434	98.353	98.504	0					10	5	3	0	0	0	0.04206	1	41165	41165		74.396	0	1	60609000	+		10739	15857	5323	5345	13058	13058					0.17382453044604063
IIGTILVLI	9	Unmodified	_IIGTILVLI_					0	0	0			REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.8339721560478	2	477.833529	953.652505	3.3015	0.0015776	-1.4856	-0.00070989	1.8159	0.00086768	477.8325208186687	98.116	0.23061	98.372	98.303	98.534	0.25636					12	7	2	0	0	0	0.02596	1	41275	41275		93.883	0	1	27280000	+		10740	15857	5323	5345	13059	13059					0.17382453044604063
IIGTILVLI	9	Unmodified	_IIGTILVLI_					0	0	0			REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	477.833529	953.652505	3.7072	0.0017714	-3.0074	-0.001437	0.69977	0.00033437	477.8320230258943	98.196	0.13501	98.424	98.362	98.497	0.22776	0.0088684	-0.00060489	NaN	93.883	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73470000	+		10741	15857	5323	5345							0.17382453044604063
IIGTILVLI	9	Unmodified	_IIGTILVLI_					0	0	0			REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	REV__tr|A0A7D7A317|A0A7D7A317_9CLOTDUF1093domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21895PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	477.833529	953.652505	3.3015	0.0015776	-1.4856	-0.00070989	1.8159	0.00086768	477.8325208186687	98.116	0.23061	98.372	98.303	98.534	0.25636	-0.043035	0.00084941	NaN	93.883	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27280000	+		10742	15857	5323	5345							0.17382453044604063
IIHILQIRKLR	11	Unmodified	_IIHILQIRKLR_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9743530154228	2	701.972088	1401.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.21	1	19.21	18.71	19.71	0								0	0	0	0.63775	1	7981	7981		0.30703	0	1				10743	5391	5324	5346	13060	13060					0.24473538981237652
IIHILQIRKLR	11	Unmodified	_IIHILQIRKLR_					0	0	0		ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	ENSG00000254440|ENST00000527246|PBOV1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9713622927666	2	701.972088	1401.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.7	1	54.7	54.2	55.2	0								0	0	0	0.63775	1	22793	22793		0.30703	0	1				10744	5391	5324	5346	13061	13061					0.24473538981237652
IIHSELIII	9	Unmodified	_IIHSELIII_					0	0	0			REV__nc|ENSG00000107290|Q7Z333-3|SETX	REV__nc|ENSG00000107290|Q7Z333-3|SETX	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.8329955935478	2	525.831517	1049.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.794	1	90.794	90.294	91.294	0								0	0	0	0.317	1	37947	37947		16.942	3.4344	1		+		10745	9228	5325	5347	13062	13062					0.12564363550905
IIHYTFHQ	8	Unmodified	_IIHYTFHQ_					0	0	0			REV__ENSG00000169836|ENST00000304883|TACR3	REV__ENSG00000169836|ENST00000304883|TACR3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	529.8104125857353	2	529.774534	1057.53451	3.1701	0.0016795	3.8586	0.0020442	7.0287	0.0037236	529.7748218115377	73.841	0.24461	75.637	75.503	75.748	1.7962					12	7	3	0	0	0	2.3239	1	30931	30931		30.225	1.738	1	1408600	+		10746	10962	5326	5348	13063	13063					0.00804893508643545
IIIDERFVID	10	Unmodified	_IIIDERFVID_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8470947146416	2	616.847896	1231.68124	1.9911	0.0012282	-2.4147	-0.0014895	-0.42365	-0.00026133	616.8463184349079	68.522	0.42715	69.888	69.633	70.06	1.3657					43	13	4	0	0	0	0.1784	2	28756	28707;28756		51.63	7.7715	1	8965300	+		10747	15604	5327	5349	13064;13065	13065					0.0746652588309189
IIIDERFVID	10	Unmodified	_IIIDERFVID_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8472167849541	2	616.847896	1231.68124	2.0711	0.0012776	-2.2202	-0.0013695	-0.14908	-9.196E-05	616.846246795251	67.974	0.49397	69.844	69.611	70.105	1.87					46	15	4	0	0	0	0.18015	1	28525	28525		51.415	16.483	1	7906400	+		10748	15604	5327	5349	13066	13066					0.0746652588309189
IIIDERFVID	10	Unmodified	_IIIDERFVID_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	616.847896	1231.68124	1.9911	0.0012282	-2.4147	-0.0014895	-0.42365	-0.00026133	616.8463184349079	68.522	0.42715	69.888	69.633	70.06	1.3657	-0.0068763	-0.00025649	NaN	51.63	43	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8965300	+		10749	15604	5327	5349							0.0746652588309189
IIIDERFVID	10	Unmodified	_IIIDERFVID_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	616.847896	1231.68124	2.0711	0.0012776	-2.2202	-0.0013695	-0.14908	-9.196E-05	616.846246795251	67.974	0.49397	69.844	69.611	70.105	1.87	-0.050536	-1.6471E-05	NaN	51.63	46	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7906400	+		10750	15604	5327	5349							0.0746652588309189
IIIDSVPEV	9	Unmodified	_IIIDSVPEV_					0	0	0		ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant;ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	984.5624877810478	1	984.561189	983.553913	2.185	0.0021512	-1.1465	-0.0011288	1.0385	0.0010225	984.5609723342234	61.757	0.18955	61.757	61.645	61.835	0					7	5	2	0	0	0	0.34572	1	25759	25759		23.148	5.0134	1	295250			10751	4325	5328	5350	13067	13067					0.06147805008913565
IIIDSVPEV	9	Unmodified	_IIIDSVPEV_					0	0	0		ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant;ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7858154177666	2	492.784233	983.553913	3.0196	0.001488	-0.9752	-0.00048056	2.0444	0.0010075	492.78463299381997	59.777	0.48084	61.746	61.345	61.826	1.969					19	15	2	0	0	0	0.087207	1	25058	25058		53.576	9.1686	1	1551500			10752	4325	5328	5350	13068	13068					0.06147805008913565
IIIDSVPEV	9	Unmodified	_IIIDSVPEV_					0	0	0		ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant;ENSG00000174306|ENST00000683867|ZHX3;nc|ENSG00000174306|Q9H4I2-2|ZHX3	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	ZHX3|p.S564I|1|0.1|ENSG00000174306|chr20:41203226-41203226|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	984.5642578005791	1	984.561189	983.553913	3.2006	0.0031512	0.22625	0.00022275	3.4269	0.0033739	984.5621230175465	59.748	0.27547	61.717	61.582	61.858	1.969					14	8	2	0	0	0	0.10294	1	25072	25072		48.346	0	1	1067600			10753	4325	5328	5350	13069	13069					0.06147805008913565
IIIPEIQKV	9	Unmodified	_IIIPEIQKV_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.8409911990166	2	526.839342	1051.66413	2.0334	0.0010713	0.51438	0.000271	2.5478	0.0013423	526.8397364409564	54.869	0.50697	54.869	54.502	55.009	0					36	15	3	0	0	0	0.063746	2	22854	22804;22854		62.573	6.3957	1	3453200			10754	2217	5329	5351	13070;13071	13071					0.14036650067941991
IIIPEIQKV	9	Unmodified	_IIIPEIQKV_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.8399536013603	2	526.839342	1051.66413	2.0856	0.0010988	0.75001	0.00039514	2.8356	0.0014939	526.8399184909687	54.236	0.50415	54.557	54.254	54.758	0.32088					41	15	3	0	0	0	0.098163	4	22690	22645;22690;22729;22770		49.933	13.806	1	4399100			10755	2217	5329	5351	13072;13073;13074;13075	13073					0.14036650067941991
IIIPEIQKV	9	Unmodified	_IIIPEIQKV_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8406860232353	2	526.839342	1051.66413	0.76385	0.00040242	1.2326	0.0006494	1.9965	0.0010518	526.840184047456	52.997	0.54469	54.398	54.089	54.633	1.4005					42	16	3	0	0	0	0.044893	4	22208	22125;22171;22208;22252		71.922	15.745	1	8623400			10756	2217	5329	5351	13076;13077;13078;13079	13078					0.14036650067941991
IIIPEIQKV	9	Unmodified	_IIIPEIQKV_					0	0	0		nc|ENSG00000124207|P55060-4|CSE1L;nc|ENSG00000124207|P55060-3|CSE1L;ENSG00000124207|ENST00000262982|CSE1L;ENST00000469700.1_1_20:47707305-47712721:+|nuORF	nc|ENSG00000124207|P55060-4|CSE1L	nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8403808474541	2	526.839342	1051.66413	1.2995	0.00068461	0.12205	6.4301E-05	1.4215	0.00074891	526.8394521006849	52.463	0.50047	54.435	54.109	54.61	1.9722					41	15	3	0	0	0	0.029061	3	21970	21920;21970;22010		88.954	17.032	1	7601400			10757	2217	5329	5351	13080;13081;13082	13081					0.14036650067941991
IIKHQSLALIC	11	Unmodified	_IIKHQSLALIC_					0	0	0			REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8715087771416	2	619.868108	1237.72166	2.0915	0.0012964	1.8558	0.0011504	3.9473	0.0024468	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	1.0362	1	33369	33369		1.3295	0	1	9211600	+		10758	13015	5330	5352	13083	13083					0.11231169001871422
IIKHQSLALIC	11	Unmodified	_IIKHQSLALIC_					0	0	0			REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8708373904228	2	619.868108	1237.72166	2.2512	0.0013954	2.2477	0.0013933	4.4989	0.0027887	619.8691419303617	80.651	1.1962	80.651	80.447	81.643	0					58	38	2	0	0	0	1.0362	1	33683	33683		1.3295	0	1	2186700	+		10759	13015	5330	5352	13084	13084					0.11231169001871422
IIKHQSLALIC	11	Unmodified	_IIKHQSLALIC_					0	0	0			REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	REV__ENST00000429248.1_1_7:56706781-56707144:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8708373904228	2	619.868108	1237.72166	2.2157	0.0013734	2.4227	0.0015017	4.6383	0.0028752	619.8693637329935	76.181	2.1643	77.475	76.512	78.676	1.2938					155	69	3	0	0	0	1.0362	1	32264	32264		1.3295	0.87119	1	2579300	+		10760	13015	5330	5352	13085	13085					0.11231169001871422
IIKKKRMKM	9	Unmodified	_IIKKKRMKM_					0	0	0			REV__ENST00000549040.5_1_12:106977470-107075774:+|nuORF	REV__ENST00000549040.5_1_12:106977470-107075774:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3784667849541	2	588.377589	1174.74062	3.2411	0.001907	-0.34923	-0.00020548	2.8919	0.0017015	588.3773518796949	105.92	0.17667	106.09	106	106.17	0.16679					27	8	5	0	0	0	0.85019	1	45151	45151		0.52476	0	1	550860000	+		10761	12566	5331	5353	13086	13086					0.16024427091929283
IIKRRKKRK	9	Unmodified	_IIKRRKKRK_					0	0	0			REV__HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|134|2|anti-sense	REV__HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|134|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	409.2958557009697	3	409.294569	1224.86188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.7	1	103.86	103.36	104.36	0.16055								0	0	0	0.42693	1	43773	43773		0.26902	0.1097	1		+		10762	14228	5332	5354	13087	13087					0.25844133841110306
IIKWTKYK	8	Unmodified	_IIKWTKYK_					0	0	0			REV__tr|A0A553SUH7|A0A553SUH7_NIACIL-cystine-bindingproteinTcyKOS=NialliacirculansOX=1397GN=CEQ21_07030PE=4SV=1	REV__tr|A0A553SUH7|A0A553SUH7_NIACIL-cystine-bindingproteinTcyKOS=NialliacirculansOX=1397GN=CEQ21_07030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3331176638603	2	540.334227	1078.6539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.428	1	71.428	70.928	71.928	0								0	0	0	1.0178	1	29747	29747		2.5775	0.73324	1		+		10763	15290	5333	5355	13088	13088					0.1177208713336313
IIKYKGDRG	9	Unmodified	_IIKYKGDRG_					0	0	0			REV__FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant	REV__FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3117553591728	2	525.308741	1048.60293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.546	1	91.737	91.237	92.237	0.19042								0	0	0	0.42693	1	38344	38344		1.8442	1.0506	1		+		10764	8761	5334	5356	13089	13089					0.08057138088520333
IIKYVDDKTK	10	Unmodified	_IIKYVDDKTK_					0	0	0		tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2382995486259	3	408.239573	1221.69689	-0.64183	-0.00026202	-4.0024	-0.001634	-4.6443	-0.001896	408.2386102301565	16.293	0.2221	16.293	16.15	16.373	0					11	6	3	0	0	0	0.78179	1	6764	6764		14.218	2.7003	1	710950			10765	17062	5335	5357	13090	13090					0.09490812400122195
IIKYVDDKTK	10	Unmodified	_IIKYVDDKTK_					0	0	0		tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	tr|A0A7D6ZFH5|A0A7D6ZFH5_9CLOT2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=dapDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	408.239573	1221.69689	0.53402	0.00021801	-5.6338	-0.0023	-5.0998	-0.002082	408.236490459527	16.001	0.12265	16.131	16.055	16.178	0.13022	-0.080616	-0.0012338	NaN	14.218	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98664			10766	17062	5335	5357							0.09490812400122195
IILATLGPA	9	Unmodified	_IILATLGPA_					0	0	0			REV__ENST00000488748.1_1_20:60777823-60778294:+|nuORF	REV__ENST00000488748.1_1_20:60777823-60778294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5527831912041	1	868.550231	867.542954	1.9358	0.0016813	0.5781	0.00050211	2.5139	0.0021834	868.5510949873415	72.209	0.4742	72.534	72.323	72.797	0.32494					33	14	3	0	0	0	0.061246	1	30177	30177		63.563	3.1733	1	3199100	+		10767	13413	5336	5358	13091	13091					0.10388447425293634
IILCLVFRKRR	11	Unmodified	_IILCLVFRKRR_					0	0	0			REV__ENST00000233557.7_1_2:27656618-27656883:+|nuORF	REV__ENST00000233557.7_1_2:27656618-27656883:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9727050662041	3	472.970986	1415.89113	2.2008	0.0010409	0.49922	0.00023612	2.7	0.001277	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0388	1	16755	16755		0.50596	0	1	10069000	+		10768	12108	5337	5359	13092	13092					0.19981910075080123
IILEPMDLKII	11	Unmodified	_IILEPMDLKII_					0	0	0		nc|ENSG00000163939|Q86U86-6|PBRM1;PBRM1|p.L1158Qfs*12|1|0.03|ENSG00000163939|chr3:52579114-52579115|-/ACTAAATTCTGGGGCTGAAAAGTACAATAACT|frameshift_variant;nc|ENSG00000163939|Q86U86-5|PBRM1;nc|ENSG00000163939|Q86U86-4|PBRM1;nc|ENSG00000163939|Q86U86-7|PBRM1;nc|ENSG00000163939|Q86U86-3|PBRM1;nc|ENSG00000163939|Q86U86-9|PBRM1;nc|ENSG00000163939|Q86U86-2|PBRM1;nc|ENSG00000163939|Q86U86-8|PBRM1;nc|ENSG00000163939|Q86U86|PBRM1;ENSG00000163939|ENST00000707071|PBRM1	nc|ENSG00000163939|Q86U86-6|PBRM1	nc|ENSG00000163939|Q86U86-6|PBRM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2668945193291	3	433.264842	1296.7727	2.753	0.0011928	1.6578	0.00071825	4.4107	0.001911	433.2657113036027	44.696	0.28199	46.061	45.867	46.149	1.3653					20	8	3	0	0	0	0.67026	1	18719	18719		19.144	2.3056	1	2603100			10769	3735	5338	5360	13093	13093					0.13618073256066054
IILEVYFW	8	Unmodified	_IILEVYFW_					0	0	0			REV__ENST00000421064.5_1_22:23995358-23995538:-|nuORF	REV__ENST00000421064.5_1_22:23995358-23995538:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.8010131716728	2	541.799686	1081.58482	1.9165	0.0010384	-0.27467	-0.00014882	1.6419	0.00088957	541.7996021805133	66.541	0.84643	66.865	66.495	67.341	0.32449					82	26	4	0	0	0	0.87803	1	27794	27794		10.183	0.83596	1	7054500	+		10770	12976	5339	5361	13094	13094					0.04729003113811814
IILIKRRKNKQ	11	Unmodified	_IILIKRRKNKQ_					0	0	0			REV__tr|A0A7D6VR96|A0A7D6VR96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00605PE=4SV=1	REV__tr|A0A7D6VR96|A0A7D6VR96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00605PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	705.4817993044853	2	705.474995	1408.93544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.03	1	113.07	112.57	113.57	0.044189								0	0	0	0.63775	1	48693	48693		0.30703	0.03801	1		+		10771	15405	5340	5362	13095	13095					0.24732637492911635
IILIKRRKNKQ	11	Unmodified	_IILIKRRKNKQ_					0	0	0			REV__tr|A0A7D6VR96|A0A7D6VR96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00605PE=4SV=1	REV__tr|A0A7D6VR96|A0A7D6VR96_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00605PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	705.4790527224541	2	705.474995	1408.93544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.32	1	113.37	112.87	113.87	0.044189								0	0	0	0.63775	1	48813	48813		0.30703	0.30703	1		+		10772	15405	5340	5362	13096	13096					0.24732637492911635
IILLHLFPR	9	Unmodified	_IILLHLFPR_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.5784179568291	3	374.577972	1120.71209	-0.85614	-0.00032069	2.6012	0.00097434	1.745	0.00065364	374.57901940600834	33.116	0.41976	33.116	32.877	33.296	0					39	14	3	0	0	0	0.8462	1	13838	13838		1.0715	0	1	6185800	+		10773	14331	5341	5363	13097	13097					0.1565576877865169
IILMPKILDR	10	Unmodified	_IILMPKILDR_					0	0	0			REV__tr|A0A553SU77|A0A553SU77_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_06495PE=3SV=1	REV__tr|A0A553SU77|A0A553SU77_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_06495PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1804382205009	3	404.58966	1210.74715	1.0286	0.00041615	-0.87962	-0.00035589	0.14896	6.0266E-05	404.5894167095154	24.611	0.32987	25.852	25.67	26	1.241					15	10	2	0	0	0	0.12557	1	10221	10221		0.56317	0.10865	1	572180	+		10774	15281	5342	5364	13098	13098					0.15020643524303523
IILMPQVQ	8	Unmodified	_IILMPQVQ_					0	0	0		ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8	ENSG00000167447|ENST00000300917|SMG8	ENSG00000167447|ENST00000300917|SMG8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2811767458916	2	471.278063	940.541574	3.1035	0.0014626	2.8557	0.0013458	5.9591	0.0028084	471.2794199188793	75.814	0.89359	76.136	75.678	76.572	0.32163					63	28	3	0	0	0	0.88958	2	31560	31560;31632		2.8892	0	1	1833700			10775	3968	5343	5365	13099;13100	13099					0.0689249006487671
IILMPQVQ	8	Unmodified	_IILMPQVQ_					0	0	0		ENSG00000167447|ENST00000300917|SMG8;nc|ENSG00000167447|Q8ND04-2|SMG8	ENSG00000167447|ENST00000300917|SMG8	ENSG00000167447|ENST00000300917|SMG8	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2782775759697	2	471.278063	940.541574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.006	1	55.975	55.475	56.475	1.9689								0	0	0	1.0178	1	22625	22625		6.3541	0	1				10776	3968	5343	5365	13101	13101					0.0689249006487671
IILPTNLYSAQ	11	Unmodified	_IILPTNLYSAQ_					0	0	0			REV__tr|A0A553SMX5|A0A553SMX5_NIACIPepSYdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23380PE=4SV=1	REV__tr|A0A553SMX5|A0A553SMX5_NIACIPepSYdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	616.8469726443291	2	616.847896	1231.68124	1.8876	0.0011644	-2.904	-0.0017913	-1.0164	-0.00062696	616.8458097265592	69.981	0.37691	69.981	69.803	70.179	0					26	11	3	0	0	0	0.34699	1	29108	29108		28.495	2.4738	1	3894000	+		10777	15034	5344	5366	13102	13102					0.07466525883069153
IILPTNLYSAQ	11	Unmodified	_IILPTNLYSAQ_					0	0	0			REV__tr|A0A553SMX5|A0A553SMX5_NIACIPepSYdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23380PE=4SV=1	REV__tr|A0A553SMX5|A0A553SMX5_NIACIPepSYdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	616.8476440310478	2	616.847896	1231.68124	1.2426	0.00076651	-1.6151	-0.00099627	-0.37248	-0.00022977	616.8468510055543	69.544	0.37686	69.866	69.689	70.066	0.32224					33	11	4	0	0	0	0.54794	1	29077	29077		22.658	1.1211	1	3650500	+		10778	15034	5344	5366	13103	13103					0.07466525883069153
IILTLPVIGI	10	Unmodified	_IILTLPVIGI_					0	0	0		tr|A0A553SGR3|A0A553SGR3_NIACIDUF969domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11365PE=4SV=1	tr|A0A553SGR3|A0A553SGR3_NIACIDUF969domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11365PE=4SV=1	tr|A0A553SGR3|A0A553SGR3_NIACIDUF969domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3611938357353	2	526.359911	1050.70527	0.33269	0.00017512	2.0773	0.0010934	2.41	0.0012685	526.3609079169217	16.233	0.37689	17.272	17.091	17.467	1.0392					42	13	4	0	0	0	0.89803	1	6766	6766		1.6526	1.1943	1	28760000			10779	16118	5345	5367	13104	13104					0.1819441110740172
IILVTPVTIV	10	Unmodified	_IILVTPVTIV_					0	0	0		ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	357.2849914431572	3	356.574004	1066.70018	0.18527	6.6062E-05	1.5761	0.00056201	1.7614	0.00062807	356.57459295621436	24.514	0.39199	26.199	25.906	26.298	1.6845					23	13	2	0	0	0	0.12555	1	10165	10165		2.086	0	1	660610			10780	3365	5346	5368	13105	13105					0.16950107244815626
IILVTPVTIV	10	Unmodified	_IILVTPVTIV_					0	0	0		ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	356.574004	1066.70018	0.61653	0.00021984	1.5666	0.00055861	2.1831	0.00077845	356.5748271256036	26.14	0.39134	26.402	26.113	26.504	0.26173	0.018416	0.00046407	NaN	2.086	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	820710			10781	3365	5346	5368							0.16950107244815626
IILVTPVTIV	10	Unmodified	_IILVTPVTIV_					0	0	0		ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	ENSG00000153822|ENST00000392671|KCNJ16	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	356.574004	1066.70018	0.08061	2.8743E-05	0.20671	7.3709E-05	0.28732	0.00010245	356.5740305871524	25.29	0.36525	26.55	26.405	26.771	1.2594	0.16624	-0.00099064	NaN	2.086	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818910			10782	3365	5346	5368							0.16950107244815626
IIMAMIGSIV	10	Unmodified	_IIMAMIGSIV_					0	0	0			REV__tr|A0A7D6VUQ6|A0A7D6VUQ6_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08010PE=4SV=1	REV__tr|A0A7D6VUQ6|A0A7D6VUQ6_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3102294802666	2	524.300681	1046.58681	2.3493	0.0012317	3.2498	0.0017039	5.599	0.0029356	524.3032087695462	60.626	0.38126	60.954	60.759	61.14	0.32809					16	11	2	0	0	0	0.6819	1	25361	25361		19.257	1.122	1	1915500	+		10783	15519	5347	5369	13106	13106					0.06537972535738845
IIMDDEFQL	9	Unmodified	_IIMDDEFQL_					0	0	0		nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP;ENSG00000102931|ENST00000219204|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.2712890505791	2	562.270632	1122.52671	1.2751	0.00071697	0.51623	0.00029026	1.7914	0.0010072	562.2712860643705	72.365	0.15866	72.365	72.237	72.396	0					7	4	2	0	0	0	0.66839	1	30137	30137		8.5933	1.304	1	451050			10784	1406	5348	5370	13107	13107					-0.029650465937947956
IIMDDEFQL	9	Unmodified	_IIMDDEFQL_					0	0	0		nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP;ENSG00000102931|ENST00000219204|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	nc|ENSG00000102931|Q9Y2Y0-2|ARL2BP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	562.270632	1122.52671	2.9754	0.001673	6.5104	0.0036606	9.4858	0.0053336	562.2752891076331	70.922	0.21627	72.263	72.086	72.302	1.3415	-0.050932	0.0048278	NaN	8.5933	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729690			10785	1406	5348	5370							-0.029650465937947956
IIMYSHPY	8	Unmodified	_IIMYSHPY_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2509643435478	2	512.252046	1022.48954	2.1686	0.0011109	-2.8768	-0.0014736	-0.70822	-0.00036279	512.2504784138993	80.882	0.37361	80.882	80.666	81.04	0					24	11	3	0	0	0	0.88409	1	33645	33645		6.3541	0	1	2489000			10786	3078	5349	5371	13108	13108					-0.020806733488939244
IIMYSHPY	8	Unmodified	_IIMYSHPY_					0	0	0		nc|ENSG00000144452|Q86UK0-2|ABCA12;ENSG00000144452|ENST00000272895|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.2497436404228	2	512.252046	1022.48954	2.0592	0.0010548	-2.8899	-0.0014804	-0.83069	-0.00042552	512.2504074439707	80.349	0.34109	80.639	80.499	80.84	0.29056					37	10	5	0	0	0	0.88409	1	33574	33574		6.3541	0	1	2576800			10787	3078	5349	5371	13109	13109					-0.020806733488939244
IINRNRTL	8	Unmodified	_IINRNRTL_					0	0	0		ENSG00000163873|ENST00000373091|GRIK3;nc|ENSG00000163873|Q13003-2|GRIK3;GRIK3|p.A64S|1|0.2|ENSG00000163873|chr1:36891022-36891022|C/A|missense_variant	ENSG00000163873|ENST00000373091|GRIK3	ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3056823611259	2	500.306532	998.598512	1.7194	0.00086023	0.55679	0.00027856	2.2762	0.0011388	500.30632089934187	76.408	0.46503	76.408	76.254	76.719	0					25	14	3	0	0	0	0.80415	1	31787	31787		20.871	0.41758	1	1926500			10788	3729	5350	5372	13110	13110					0.09915673665602753
IINYVDEK	8	Unmodified	_IINYVDEK_					0	0	0		nc|ENSG00000165181|Q5VXU9-2|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1;ENSG00000165181|ENST00000682961|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2682678103447	2	497.266207	992.517862	0.43644	0.00021703	3.5409	0.0017608	3.9774	0.0019778	497.26802098939237	16.932	0.65738	16.932	16.659	17.316	0					46	20	3	0	0	0	0.87276	1	7102	7102		13.508	3.3245	1	1155800			10789	3819	5351	5373	13111	13111					0.02130347832053303
IINYVDEK	8	Unmodified	_IINYVDEK_					0	0	0		nc|ENSG00000165181|Q5VXU9-2|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1;ENSG00000165181|ENST00000682961|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2688171267509	2	497.266207	992.517862	1.0359	0.0005151	2.2926	0.00114	3.3285	0.0016551	497.26746877000124	16.788	0.5004	16.939	16.748	17.248	0.15093					20	16	2	0	0	0	0.84871	1	6963	6963		16.942	1.0951	1	881210			10790	3819	5351	5373	13112	13112					0.02130347832053303
IINYVDEK	8	Unmodified	_IINYVDEK_					0	0	0		nc|ENSG00000165181|Q5VXU9-2|SHOC1;nc|ENSG00000165181|Q5VXU9-3|SHOC1;nc|ENSG00000165181|Q5VXU9|SHOC1;ENSG00000165181|ENST00000682961|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	nc|ENSG00000165181|Q5VXU9-2|SHOC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	497.266207	992.517862	0.17355	8.6301E-05	4.5113	0.0022433	4.6849	0.0023296	497.2685572663196	15.986	0.18598	17.025	16.936	17.122	1.0392	0.059794	0.0013471	NaN	16.942	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335800			10791	3819	5351	5373							0.02130347832053303
IIPEQSLPVP	10	Unmodified	_IIPEQSLPVP_					0	0	0		ENST00000230461.10_1_6:75977403-75994215:-|nuORF	ENST00000230461.10_1_6:75977403-75994215:-|nuORF	ENST00000230461.10_1_6:75977403-75994215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8206664919853	2	546.818607	1091.62266	2.989	0.0016344	-0.20849	-0.000114	2.7805	0.0015204	546.8183743206387	74.026	0.79856	75.823	75.347	76.146	1.7962					50	25	3	0	0	0	0.32206	1	31088	31088		37.974	5.6685	1	9888200			10792	5547	5352	5374	13113	13113					0.08051469308611559
IIPKEEKHI	9	Unmodified	_IIPKEEKHI_					0	0	0			REV__tr|A0A7D7A3Y5|A0A7D7A3Y5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01355PE=4SV=1	REV__tr|A0A7D7A3Y5|A0A7D7A3Y5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8317138552666	2	553.832049	1105.64954	3.3857	0.0018751	-3.3683	-0.0018654	0.017499	9.6915E-06	553.8297129525997	72.969	1.2218	74.299	74.069	75.29	1.3297					58	38	3	0	0	0	0.75267	1	30793	30793		5.2307	0.47466	1	1864000	+		10793	15869	5353	5375	13114	13114					0.10094577919812764
IIPKEEKHI	9	Unmodified	_IIPKEEKHI_					0	0	0			REV__tr|A0A7D7A3Y5|A0A7D7A3Y5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01355PE=4SV=1	REV__tr|A0A7D7A3Y5|A0A7D7A3Y5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01355PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	553.832049	1105.64954	3.3857	0.0018751	-3.3683	-0.0018654	0.017499	9.6915E-06	553.8297129525997	72.969	1.2218	74.299	74.069	75.29	1.3297	0.10575	-0.00036261	NaN	5.2307	58	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1864000	+		10794	15869	5353	5375							0.10094577919812764
IIPMLHYR	8	Unmodified	_IIPMLHYR_					0	0	0			REV__ENST00000453839.5_1_2:61002191-61018944:+|nuORF	REV__ENST00000453839.5_1_2:61002191-61018944:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2020141482353	3	348.200395	1041.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.774	1	65.101	64.601	65.601	0.32689								0	0	0	1.0178	1	27131	27131		0.45834	0	1		+		10795	8889	5354	5376	13115	13115					0.06023001050334642
IIPMLRIQH	9	Unmodified	_IIPMLRIQH_					0	0	0		tr|A0A7D7A3A4|A0A7D7A3A4_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22945PE=4SV=1	tr|A0A7D7A3A4|A0A7D7A3A4_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22945PE=4SV=1	tr|A0A7D7A3A4|A0A7D7A3A4_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22945PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8403198122978	2	560.836611	1119.65867	1.1511	0.00064559	2.4695	0.001385	3.6206	0.0020306	560.837808701699	96.023	0.25909	96.023	95.891	96.15	0					18	8	3	0	0	0	0.84963	1	40190	40190		0.6015	0.076735	1	3168000			10796	17274	5355	5377	13116	13116					0.10362648004479524
IIQAVKDSFI	10	Unmodified	_IIQAVKDSFI_					0	0	0		tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3307983279228	2	567.331882	1132.64921	2.0951	0.0011886	-3.0229	-0.001715	-0.92785	-0.0005264	567.3300211793181	89.067	0.31818	89.067	88.891	89.209	0					16	9	2	0	0	0	0.88314	1	37237	37237		3.2813	0.78282	1	1195800			10797	16652	5356	5378	13117	13117					0.0881915819995811
IIQAVKDSFI	10	Unmodified	_IIQAVKDSFI_					0	0	0		tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	tr|A0A553STJ4|A0A553STJ4_NIACIPotassium-transportingATPaseATP-bindingsubunitOS=NialliacirculansOX=1397GN=kdpBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	567.331882	1132.64921	2.5045	0.0014209	-2.6949	-0.0015289	-0.19035	-0.00010799	567.3301083033427	88.904	0.35599	89.127	88.971	89.327	0.22359	0.030239	0.00012684	NaN	3.2813	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	552970			10798	16652	5356	5378							0.0881915819995811
IIQSIRMGM	9	Unmodified	_IIQSIRMGM_					0	0	0		ENSG00000151778|ENST00000379179|SERP2;ENSG00000120742|ENST00000239944|SERP1	ENSG00000151778|ENST00000379179|SERP2	ENSG00000151778|ENST00000379179|SERP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7855712771416	2	524.78573	1047.55691	0.9351	0.00049073	-0.99561	-0.00052248	-0.060514	-3.1757E-05	524.7849489108927	37.617	0.18024	38.901	38.838	39.019	1.284					10	5	2	0	0	0	0.30098	1	15819	15819		25.399	2.2509	1	1020500			10799	3302	5357	5379	13118	13118					0.03503033590436644
IIQSIRMGM	9	Unmodified	_IIQSIRMGM_					0	0	0		ENSG00000151778|ENST00000379179|SERP2;ENSG00000120742|ENST00000239944|SERP1	ENSG00000151778|ENST00000379179|SERP2	ENSG00000151778|ENST00000379179|SERP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	524.78573	1047.55691	0.77532	0.00040688	1.8942	0.00099403	2.6695	0.0014009	524.7869546611234	36.994	0.22063	38.812	38.725	38.945	1.8176	-0.044389	0.00070077	NaN	25.399	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745910			10800	3302	5357	5379							0.03503033590436644
IIQYVVGTL	9	Unmodified	_IIQYVVGTL_					0	0	0		ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3060180544853	2	503.302593	1004.59063	2.8297	0.0014242	1.8371	0.00092464	4.6668	0.0023488	503.3033081843286	60.144	0.4819	61.564	61.421	61.903	1.4196					31	15	3	0	0	0	0.34572	1	25283	25283		23.148	2.6948	1	1814000			10801	5057	5358	5380	13119	13119					0.08852101625473097
IIRLPVGGGR	10	Unmodified	_IIRLPVGGGR_					0	0	0			REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	REV__ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5588561892509	3	346.557459	1036.65055	1.4042	0.00048663	3.5138	0.0012177	4.918	0.0017044	346.5582543349455	67.054	0.55699	67.377	67.126	67.683	0.32269					34	18	2	0	0	0	0.8974	1	28111	28111		1.7423	0.54893	1	3333000	+		10802	8489	5359	5381	13120	13120					0.13368837079360674
IISALNRPNR	10	Unmodified	_IISALNRPNR_					0	0	0			REV__ENST00000558489.1_1_14:54422455-54423330:-|nuORF	REV__ENST00000558489.1_1_14:54422455-54423330:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1530334353447	3	385.231523	1152.67274	0.1157	4.4571E-05	2.5043	0.00096475	2.62	0.0010093	385.5661716109716	56.393	0.21784	57.807	57.753	57.971	1.4145					9	6	2	0	0	0	0.12559	1	23619	23619		0.77653	0.63664	1	2572700	+		10803	13884	5360	5382	13121	13121					0.10251016757115394
IISALNRPNR	10	Unmodified	_IISALNRPNR_					0	0	0			REV__ENST00000558489.1_1_14:54422455-54423330:-|nuORF	REV__ENST00000558489.1_1_14:54422455-54423330:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1532165408134	3	385.231523	1152.67274	1.686	0.00064948	0.41905	0.00016143	2.105	0.00081091	385.5650929490508	54.279	0.34769	56.248	55.97	56.318	1.9684					14	10	2	0	0	0	0.12559	1	22633	22633		0.77653	0.68169	1	3416400	+		10804	13884	5360	5382	13122	13122					0.10251016757115394
IISCINDWL	9	Unmodified	_IISCINDWL_					0	0	0		tr|A0A7D6VSJ0|A0A7D6VSJ0_9CLOTPD-(D/E)XKmotifproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09485PE=4SV=1	tr|A0A7D6VSJ0|A0A7D6VSJ0_9CLOTPD-(D/E)XKmotifproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09485PE=4SV=1	tr|A0A7D6VSJ0|A0A7D6VSJ0_9CLOTPD-(D/E)XKmotifproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7707397341728	2	538.775885	1075.53722	2.6642	0.0014354	-3.7704	-0.0020314	-1.1063	-0.00059604	538.7720651822203	76.231	0.66436	77.525	77.128	77.792	1.2938					29	21	2	0	0	0	0.10294	1	31971	31971		48.346	8.3885	1	11185000			10805	16871	5361	5383	13123	13123					0.0024698085128420644
IISDLVPLD	9	Unmodified	_IISDLVPLD_					0	0	0			REV__ENSG00000167910|ENST00000301645|CYP7A1	REV__ENSG00000167910|ENST00000301645|CYP7A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	984.5647460818291	1	984.561189	983.553913	3.6324	0.0035763	-1.8455	-0.001817	1.7869	0.0017593	984.5603811776975	60.23	0.33007	61.649	61.449	61.779	1.4196					22	10	3	0	0	0	0.10294	1	25240	25240		48.346	0	1	1206600	+		10806	10886	5362	5384	13124	13124					0.06147805008902196
IISDLVPLD	9	Unmodified	_IISDLVPLD_					0	0	0			REV__ENSG00000167910|ENST00000301645|CYP7A1	REV__ENSG00000167910|ENST00000301645|CYP7A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	984.5644409060478	1	984.561189	983.553913	3.2006	0.0031512	0.22625	0.00022275	3.4269	0.0033739	984.5621230175465	59.748	0.27547	61.717	61.582	61.858	1.969					14	8	2	0	0	0	0.1735	1	25122	25122		36.044	1.9418	1	1067600	+		10807	10886	5362	5384	13125	13125					0.06147805008902196
IISDLVPLD	9	Unmodified	_IISDLVPLD_					0	0	0			REV__ENSG00000167910|ENST00000301645|CYP7A1	REV__ENSG00000167910|ENST00000301645|CYP7A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	984.561189	983.553913	3.6324	0.0035763	-1.8455	-0.001817	1.7869	0.0017593	984.5603811776975	60.23	0.33007	61.649	61.449	61.779	1.4196	-0.03434	-0.0010406	NaN	48.346	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1206600	+		10808	10886	5362	5384							0.06147805008902196
IISGISVLG	9	Unmodified	_IISGISVLG_					0	0	0		tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.5318481326103	1	858.529495	857.522219	3.7525	0.0032216	-1.9298	-0.0016568	1.8227	0.0015648	858.5293345629441	81.827	0.25211	83.497	83.387	83.639	1.67					12	7	2	0	0	0	0.087207	1	34324	34324		53.576	0	1	942210			10809	16667	5363	5385	13126	13126					0.08775857045611701
IISGLTKDTI	10	Unmodified	_IISGLTKDTI_					0	0	0		tr|A0A553SPU9|A0A553SPU9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10335PE=4SV=1	tr|A0A553SPU9|A0A553SPU9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10335PE=4SV=1	tr|A0A553SPU9|A0A553SPU9_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8218261599541	2	530.816064	1059.61758	1.9511	0.0010357	-2.8861	-0.001532	-0.93504	-0.00049633	530.8145629135761	68.579	2.293	70.432	69.441	71.734	1.853					224	73	6	0	0	0	0.85124	1	29099	29099		6.7232	0.99131	1	13483000			10810	16483	5364	5386	13127	13127					0.09015165445998718
IISKLDLQ	8	Unmodified	_IISKLDLQ_					0	0	0			REV__tr|A0A553SMC8|A0A553SMC8_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=bglXPE=3SV=1	REV__tr|A0A553SMC8|A0A553SMC8_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=bglXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2880126833916	2	465.286943	928.559333	2.6075	0.0012132	-0.54231	-0.00025233	2.0652	0.00096091	465.28707194913125	62.915	1.0932	64.86	64.597	65.69	1.9444					95	34	5	0	0	0	0.058963	1	26376	26376		103.75	0.39478	1	196070000	+		10811	15013	5365	5387	13128	13128					0.09219528591370363
IISLYDCIFK	10	Unmodified	_IISLYDCIFK_					0	0	0		ENSG00000215217|ENST00000399810|CFAP90	ENSG00000215217|ENST00000399810|CFAP90	ENSG00000215217|ENST00000399810|CFAP90	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8257934451103	2	607.828117	1213.64168	1.9167	0.001165	-3.4313	-0.0020856	-1.5146	-0.00092061	607.8261140365734	67.819	0.55859	69.689	69.299	69.858	1.87					51	17	4	0	0	0	0.49886	1	28456	28456		27.629	3.6082	1	5276900			10812	5255	5366	5388	13129	13129					0.04340682607994495
IISSGLLIVL	10	Unmodified	_IISSGLLIVL_					0	0	0		tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	tr|A0A553SRK4|A0A553SRK4_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.3449584841728	2	514.341718	1026.66888	2.1973	0.0011302	0.88114	0.00045321	3.0785	0.0015834	514.3423995549006	61.42	0.18603	61.75	61.61	61.796	0.32974					7	5	2	0	0	0	0.80568	1	25718	25718		11.64	4.3511	1	416880			10813	16563	5367	5389	13130	13130					0.15661534210721584
IISYIVILH	9	Unmodified	_IISYIVILH_					0	0	0		ENSG00000172188|ENST00000641580|OR4C11	ENSG00000172188|ENST00000641580|OR4C11	ENSG00000172188|ENST00000641580|OR4C11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1636230349541	2	535.83406	1069.65357	1.7699	0.00094837	-0.74976	-0.00040174	1.0201	0.00054662	535.8340351962955	76.359	0.21294	76.359	76.284	76.497	0					12	6	2	0	0	0	0.116	1	31761	31761		9.3474	1.4373	1	1090700			10814	4229	5368	5390	13131	13131					0.12152667413511153
IITCQKVII	9	Unmodified	_IITCQKVII_					0	0	0		tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.8205444216728	2	515.820095	1029.62564	3.1398	0.0016196	-1.9929	-0.001028	1.1469	0.00059158	515.8190644471446	62.497	0.42403	63.911	63.679	64.103	1.4134					35	13	3	0	0	0	0.066815	1	26252	26252		61.357	11.424	1	5473100			10815	16648	5369	5391	13132	13132					0.11201021161787139
IITCQKVII	9	Unmodified	_IITCQKVII_					0	0	0		tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8204833865166	2	515.820095	1029.62564	3.0633	0.0015801	-1.8759	-0.00096761	1.1875	0.00061252	515.8193203189346	61.919	0.40423	63.877	63.657	64.061	1.9571					32	12	3	0	0	0	0.079895	1	25949	25949		56.177	2.3442	1	3821000			10816	16648	5369	5391	13133	13133					0.11201021161787139
IITITSYGS	9	Unmodified	_IITITSYGS_					0	0	0			REV__tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	REV__tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7620117068291	2	477.760758	953.506963	3.3073	0.0015801	-2.09	-0.00099852	1.2173	0.00058159	477.7601436992466	86.206	0.52887	87.333	86.91	87.439	1.1265					25	21	2	0	0	0	0.59203	2	36209	36209;36301		11.64	2.2929	1	6640500	+		10817	15160	5370	5392	13134;13135	13134					0.0283494545776648
IITITSYGS	9	Unmodified	_IITITSYGS_					0	0	0			REV__tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	REV__tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7607604861259	2	477.760758	953.506963	3.5149	0.0016793	-2.5775	-0.0012314	0.93743	0.00044787	477.75998115523777	85.667	0.76757	87.214	86.722	87.49	1.547					42	31	2	0	0	0	0.59203	1	35949	35949		11.64	0	1	6794100	+		10818	15160	5370	5392	13136	13136					0.0283494545776648
IITQPNQLV	9	Unmodified	_IITQPNQLV_					0	0	0			REV__nc|ENSG00000008130|O95544-2|NADK	REV__nc|ENSG00000008130|O95544-2|NADK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	512.7850219607353	2	513.303124	1024.5917	3.1618	0.001623	-2.1631	-0.0011103	0.99868	0.00051263	513.8020867837904	62.598	0.31268	64.542	64.315	64.628	1.9444					15	9	2	0	0	0	0.10844	1	26292	26292		11.64	0	1	1630500	+		10819	14382	5371	5393	13137	13137					0.0803831599437217
IIVEKEADIS	10	Unmodified	_IIVEKEADIS_					0	0	0		ENST00000533297.1_1_11:111896132-111933256:+|nuORF;ENSG00000150768|ENST00000280346|DLAT	ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENST00000533297.1_1_11:111896132-111933256:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8112060427666	2	558.810979	1115.6074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.911	1	41.221	40.721	41.721	1.3102								0	0	0	0.6513	1	16740	16740		13.042	0.51092	1				10820	7185	5372	5394	13138	13138					0.05422557720748955
IIVFYMMDIM	10	Unmodified	_IIVFYMMDIM_					0	0	0			REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.8204833865166	2	638.312931	1274.61131	3.7787	0.002412	3.0434	0.0019427	6.8221	0.0043547	638.8164971557768	92.946	0.3279	93.817	93.605	93.933	0.87176					23	9	3	0	0	0	0.51515	1	39133	39133		26.884	11.036	1	1534000	+		10821	8826	5373	5395	13139	13139					-0.015011353730187693
IIVFYMMDIM	10	Unmodified	_IIVFYMMDIM_					0	0	0			REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	638.312931	1274.61131	2.1332	0.0013617	4.5689	0.0029164	6.7021	0.0042781	638.315645994572	94.029	0.24928	94.029	93.9	94.149	0	0.15801	0.00071198	NaN	26.884	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	480220	+		10822	8826	5373	5395							-0.015011353730187693
IIVFYMMDIM	10	Unmodified	_IIVFYMMDIM_					0	0	0			REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	638.312931	1274.61131	2.5868	0.0016512	5.696	0.0036358	8.2828	0.005287	638.3176610772964	93.686	0.22353	93.831	93.686	93.91	0.14493	-0.039902	0.0021508	NaN	26.884	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550970	+		10823	8826	5373	5395							-0.015011353730187693
IIVFYMMDIM	10	Unmodified	_IIVFYMMDIM_					0	0	0			REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	638.312931	1274.61131	2.9156	0.0018611	2.8191	0.0017995	5.7348	0.0036606	638.3156344494636	92.479	0.32351	93.806	93.634	93.958	1.3269	-0.064827	-0.0015219	NaN	26.884	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1002600	+		10824	8826	5373	5395							-0.015011353730187693
IIVKAAKK	8	Unmodified	_IIVKAAKK_					0	0	0			REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.8116027712822	2	435.810388	869.606223	0.71104	0.00030988	-0.95516	-0.00041627	-0.24412	-0.00010639	435.80999567476596	109.14	0.9659	109.14	108.7	109.67	0					112	44	3	0	0	0	0.89178	1	47313	47313		0.69038	0	1	36772000	+		10825	13743	5374	5396	13140	13140					0.16620432933166285
IIVKAAKK	8	Unmodified	_IIVKAAKK_					0	0	0			REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	REV__ENST00000535317.5_1_12:31230919-31231000:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.8108093142509	2	435.810388	869.606223	3.3339	0.001453	-2.6441	-0.0011523	0.68988	0.00030066	435.80933042662883	109.13	0.78305	109.28	108.97	109.75	0.15898					82	36	3	0	0	0	0.89178	1	47404	47404		0.69038	0	1	31842000	+		10826	13743	5374	5396	13141	13141					0.16620432933166285
IIVKGTKKT	9	Unmodified	_IIVKGTKKT_					0	0	0			REV__nc|ENSG00000004487|O60341|KDM1A	REV__nc|ENSG00000004487|O60341|KDM1A	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3333923220634	2	494.331685	986.648816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.16	103.66	104.66	0.059502								0	0	0	0.42693	1	43835	43835		0.45834	0	1		+		10827	8486	5375	5397	13142	13142					0.1549578327076233
IIVNELKWFPH	11	Unmodified	_IIVNELKWFPH_					0	0	0			REV__tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	REV__tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.3944579958916	2	698.392805	1394.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.38	1	103.44	102.94	103.94	0.059502								0	0	0	0.63775	1	43346	43346		0.35063	0	1		+		10828	15040	5376	5398	13143	13143					0.08946200282321115
IIVSLVFYTIW	11	Unmodified	_IIVSLVFYTIW_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|237|1|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|237|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3956176638603	2	677.394482	1352.77441	2.4756	0.001677	0.63318	0.00042891	3.1088	0.0021059	677.3949411725933	83.276	1.3837	83.276	82.493	83.876	0					99	44	3	0	0	0	1.0362	2	34591	34591;34643		1.3295	0	1	1972200	+		10829	14184	5377	5399	13144;13145	13144					0.1121345033632224
IIVSLVFYTIW	11	Unmodified	_IIVSLVFYTIW_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|237|1|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|237|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3964721560478	2	677.394482	1352.77441	2.2271	0.0015086	0.94971	0.00064333	3.1768	0.002152	677.3951106076005	83.067	1.4121	83.337	82.634	84.046	0.27029					101	45	3	0	0	0	1.0084	1	34520	34520		3.2813	1.4371	1	1706000	+		10830	14184	5377	5399	13146	13146					0.1121345033632224
IIWWPVGSYQ	10	Unmodified	_IIWWPVGSYQ_					0	0	0			REV__nc|ENSG00000091409|P23229-7|ITGA6	REV__nc|ENSG00000091409|P23229-7|ITGA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.8249389529228	2	624.824224	1247.63389	3.8598	0.0024117	-2.2069	-0.0013789	1.6529	0.0010328	624.8226460336844	91.219	0.50615	92.2	91.942	92.448	0.98156					45	15	4	0	0	0	0.35292	1	38402	38402		36.127	1.7253	1	7005000	+		10831	8903	5378	5400	13147	13147					0.019982914027650622
IIYIINFGF	9	Unmodified	_IIYIINFGF_					0	0	0		tr|A0A553SQX3|A0A553SQX3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07385PE=4SV=1	tr|A0A553SQX3|A0A553SQX3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07385PE=4SV=1	tr|A0A553SQX3|A0A553SQX3_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07385PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.7871581912041	2	550.312961	1098.61137	2.2476	0.0012369	0.099097	5.4534E-05	2.3467	0.0012914	550.3137244530936	65.66	0.46037	67.058	66.849	67.31	1.3989					33	14	3	0	0	0	0.116	1	27464	27464		2.3027	0	1	3584800			10832	16535	5379	5401	13148	13148					0.06600692005144992
IIYLWPKKF	9	Unmodified	_IIYLWPKKF_					0	0	0			REV__tr|A0A7D6VWI7|A0A7D6VWI7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08520PE=4SV=1	REV__tr|A0A7D6VWI7|A0A7D6VWI7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3680908083916	2	604.365527	1206.7165	2.556	0.0015448	0.57485	0.00034742	3.1309	0.0018922	604.3655960912371	92.379	0.52594	92.548	92.249	92.775	0.16835					60	16	5	0	0	0	0.84963	1	38756	38756		0.6015	0.14316	1	15137000	+		10833	15542	5380	5402	13149	13149					0.12141233201532486
IIYRRNRLQNI	11	Unmodified	_IIYRRNRLQNI_					0	0	0			REV__ENSG00000183476|ENST00000328828|SH2D7	REV__ENSG00000183476|ENST00000328828|SH2D7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.9605590701103	3	486.959915	1457.85791	4.6615	0.00227	-1.6531	-0.00080497	3.0085	0.001465	486.9591955423125	87.983	1.5199	89.43	88.594	90.113	1.4467					120	47	3	0	0	0	1.039	1	37066	37066		0.45452	0.35968	1	2217100	+		10834	11393	5381	5403	13150	13150					0.14729999556743678
IKACRPIKP	9	Unmodified	_IKACRPIKP_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2121459841728	3	342.547795	1024.62156	-0.20907	-7.1615E-05	-0.43214	-0.00014803	-0.64121	-0.00021964	342.5475897674181	27.971	0.88649	29.25	28.689	29.576	1.2789					57	28	3	0	0	0	0.82654	1	11657	11657		2.2828	2.2828	1	4680500			10835	3425;7900	5382	5404	13151	13151					0.1102297645870749
IKAKKRSKKKI	11	Unmodified	_IKAKKRSKKKI_					0	0	0		tr|A0A553SIH7|A0A553SIH7_NIACIAlpha-N-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_14895PE=3SV=1	tr|A0A553SIH7|A0A553SIH7_NIACIAlpha-N-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_14895PE=3SV=1	tr|A0A553SIH7|A0A553SIH7_NIACIAlpha-N-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_14895PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4693481326103	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.64	1	105.81	105.31	106.31	0.16679								0	0	0	0.63775	1	44985	44985		0.26902	0.26902	1				10836	16200	5383	5405	13152	13152					0.26834136606976244
IKCYRPRI	8	Unmodified	_IKCYRPRI_					0	0	0			REV__ENSG00000149150|ENST00000278426|SLC43A1	REV__ENSG00000149150|ENST00000278426|SLC43A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.2072021365166	3	350.207661	1047.60115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.471	1	31.753	31.253	32.253	1.2825								0	0	0	1.0178	1	12787	12787		3.9444	1.2092	1		+		10837	10360	5384	5406	13153	13153					0.07925805798913643
IKDILKPEI	9	Unmodified	_IKDILKPEI_					0	0	0		nc|ENSG00000130713|Q13868-3|EXOSC2;ENSG00000130713|ENST00000372358|EXOSC2;nc|ENSG00000130713|Q13868-2|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	nc|ENSG00000130713|Q13868-3|EXOSC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	534.7980224490166	2	534.8368	1067.65905	1.9482	0.001042	-0.33088	-0.00017697	1.6174	0.00086502	534.8363850059277	42.471	0.2817	44.392	44.165	44.446	1.9211					14	8	2	0	0	0	0.11388	1	17804	17804		15.248	8.5253	1	345190			10838	2452	5385	5407	13154	13154					0.12792346205310423
IKELTKRHNL	10	Unmodified	_IKELTKRHNL_					0	0	0		MMRN1|p.S1155Lfs*4|1|0.28|ENSG00000138722|chr4:89953190-89953202|ATTTAGTGCTCAT/-|frameshift_variant;ENSG00000138722|ENST00000264790|MMRN1	MMRN1|p.S1155Lfs*4|1|0.28|ENSG00000138722|chr4:89953190-89953202|ATTTAGTGCTCAT/-|frameshift_variant	MMRN1|p.S1155Lfs*4|1|0.28|ENSG00000138722|chr4:89953190-89953202|ATTTAGTGCTCAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6928588747978	4	313.693753	1250.7459	-2.7068	-0.00084912	-0.59073	-0.00018531	-3.2976	-0.0010344	313.69353164398336	30.668	0.64194	30.668	30.254	30.896	0					84	20	5	0	0	0	0.89803	1	12810	12810		1.4551	0.44154	1	22347000			10839	2850	5386	5408	13155	13155					0.13056145479754377
IKENHVVLK	9	Unmodified	_IKENHVVLK_					0	0	0			REV__tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	REV__tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3332397341728	2	540.332216	1078.64988	1.7646	0.00095349	-0.98471	-0.00053207	0.77993	0.00042142	540.3319359797522	67.377	0.94784	67.7	67.366	68.313	0.32269					39	30	3	0	0	0	0.8432	1	28272	28272		1.4819	0.15237	1	1096000	+		10840	15751	5387	5409	13156	13156					0.11369997639667417
IKENKRAHAK	10	Unmodified	_IKENKRAHAK_					0	0	0			REV__ENSG00000165813|ENST00000369287|CCDC186	REV__ENSG00000165813|ENST00000369287|CCDC186	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8570434451103	2	597.856921	1193.69929	2.1578	0.00129	-0.9659	-0.00057747	1.1919	0.00071257	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.89803	1	32445	32445		1.1933	0.12188	1	9732000	+		10841	10798	5388	5410	13157	13157					0.11018705648439209
IKERQRRIKEF	11	Unmodified	_IKERQRRIKEF_					0	0	0		nc|ENSG00000077935|Q8NDV3-2|SMC1B;ENSG00000077935|ENST00000357450|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.6352722048759	3	501.63532	1501.88413	2.177	0.0010921	-1.2414	-0.00062271	0.93567	0.00046936	501.6345111367571	90.8	1.7886	90.8	89.905	91.693	0					123	56	3	0	0	0	1.0396	1	37913	37913		0.073264	0.073264	1	2114400			10842	967	5389	5411	13158	13158					0.15326268728199466
IKERQRRIKEF	11	Unmodified	_IKERQRRIKEF_					0	0	0		nc|ENSG00000077935|Q8NDV3-2|SMC1B;ENSG00000077935|ENST00000357450|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	nc|ENSG00000077935|Q8NDV3-2|SMC1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.6363098025322	3	501.63532	1501.88413	3.176	0.0015932	-2.0752	-0.001041	1.1007	0.00055216	501.634136526612	90.648	1.9841	90.857	90.049	92.033	0.20904					149	61	3	0	0	0	1.0396	1	37784	37784		0.073264	0.073264	1	2134000			10843	967	5389	5411	13159	13159					0.15326268728199466
IKGKMKKG	8	Unmodified	_IKGKMKKG_					0	0	0			REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.2877075076103	2	445.286223	888.557893	1.5263	0.00067964	2.2234	0.00099003	3.7497	0.0016697	445.28717203505676	73.507	0.76669	73.507	73.153	73.919	0					85	24	5	0	0	0	0.89178	1	30582	30582		0.69038	0	1	146920000	+		10844	12760	5390	5412	13160	13160					0.10915616021634378
IKGKMKKG	8	Unmodified	_IKGKMKKG_					0	0	0			REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.2878906130791	2	445.286223	888.557893	2.7177	0.0012101	1.3996	0.00062323	4.1173	0.0018334	445.2868824249724	73.242	0.92504	73.567	73.276	74.201	0.32494					93	29	5	0	0	0	0.89178	1	30641	30641		0.69038	0	1	316040000	+		10845	12760	5390	5412	13161	13161					0.10915616021634378
IKGKMKKG	8	Unmodified	_IKGKMKKG_					0	0	0			REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	REV__ENST00000380693.7_1_X:11777712-11777841:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.2885925173759	2	445.286223	888.557893	2.7916	0.001243	3.0829	0.0013728	5.8745	0.0026158	445.287568600455	71.978	0.95453	73.801	73.507	74.462	1.824					83	30	5	0	0	0	0.89178	1	30199	30199		0.69038	0	1	104330000	+		10846	12760	5390	5412	13162	13162					0.10915616021634378
IKGPPLTLT	9	Unmodified	_IKGPPLTLT_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2997924685478	2	470.29731	938.580068	3.5855	0.0016862	0.57578	0.00027079	4.1612	0.001957	470.297503955266	109.1	0.2251	109.25	109.12	109.34	0.1548					25	10	3	0	0	0	0.83213	1	47224	47224		2.0598	1.3694	1	22888000	+		10847	11663	5391	5413	13163	13163					0.10832118971029558
IKGPPLTLT	9	Unmodified	_IKGPPLTLT_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	470.29731	938.580068	1.6899	0.00079474	4.1397	0.0019469	5.8295	0.0027416	470.29912308771617	109.14	0.10705	109.14	109.08	109.19	0	-0.073102	0.002629	NaN	2.0598	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2472100	+		10848	11663	5391	5413							0.10832118971029558
IKGPPLTLT	9	Unmodified	_IKGPPLTLT_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	470.29731	938.580068	3.4749	0.0016342	4.376	0.002058	7.8509	0.0036922	470.29953815928695	109.14	0.11572	109.19	109.11	109.22	0.050644	-0.028612	0.0028512	NaN	2.0598	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1756800	+		10849	11663	5391	5413							0.10832118971029558
IKGPPLTLT	9	Unmodified	_IKGPPLTLT_					0	0	0			REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	REV__ENST00000482899.1_1_7:150737654-150742433:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	470.29731	938.580068	3.5855	0.0016862	0.57578	0.00027079	4.1612	0.001957	470.297503955266	109.1	0.2251	109.25	109.12	109.34	0.1548	0.038369	-0.00072321	NaN	2.0598	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22888000	+		10850	11663	5391	5413							0.10832118971029558
IKHFQPEIQ	9	Unmodified	_IKHFQPEIQ_					0	0	0		nc|ENSG00000101605|P52179-2|MYOM1;ENSG00000101605|ENST00000356443|MYOM1	nc|ENSG00000101605|P52179-2|MYOM1	nc|ENSG00000101605|P52179-2|MYOM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3140746951103	2	570.314023	1138.61349	0.7295	0.00041605	-2.3396	-0.0013343	-1.6101	-0.00091826	570.3127762752163	23.381	0.30466	23.381	23.229	23.534	0					22	9	3	0	0	0	0.49082	1	9770	9770		15.847	1.9411	1	2239800			10851	1359	5392	5414	13164	13164					0.04973120742943138
IKIDKVLVHK	10	Unmodified	_IKIDKVLVHK_					0	0	0			REV__ENSG00000138134|ENST00000371926|STAMBPL1	REV__ENSG00000138134|ENST00000371926|STAMBPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	597.6010619997978	2	596.892441	1191.77033	1.5731	0.00093894	-0.011195	-6.682E-06	1.5619	0.00093226	596.8921663297065	107.48	0.17905	107.48	107.37	107.55	0					21	8	3	0	0	0	0.1256	1	46011	46011		0.35063	0.043601	1	61641000	+		10852	10045	5393	5415	13165	13165					0.18211405633246613
IKKKEQIKKLR	11	Unmodified	_IKKKEQIKKLR_					0	0	0			REV__ENSG00000100554|ENST00000216442|ATP6V1D	REV__ENSG00000100554|ENST00000216442|ATP6V1D	MSMS	GG20161007_CRH_Patient100_A02_01	1	706.4788085818291	2	706.477203	1410.93985	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.65	1	114.65	114.15	115.15	0								0	0	0	0.63775	1	49493	49493		0.30703	0	1		+		10853	8994	5394	5416	13166	13166					0.25082101915836574
IKKKHKPVLKF	11	Unmodified	_IKKKHKPVLKF_					0	0	0			REV__ENSG00000178804|ENST00000324382|H1-8	REV__ENSG00000178804|ENST00000324382|H1-8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	341.9816161990166	4	342.232779	1364.90201	-2.0528	-0.00070255	-0.086627	-2.9647E-05	-2.1395	-0.0007322	342.23278462969404	27.207	0.66414	27.207	26.656	27.321	0					40	21	3	0	0	0	0.14606	1	11357	11357		0.094841	0	1	1074000	+		10854	11255	5395	5417	13167	13167					0.23415635720994032
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3489257693291	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.969	1	93.137	92.637	93.637	0.16835								0	0	0	1.0178	1	38928	38928		0.69038	0	1		+		10855	12146	5396	5418	13168	13168					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3495361208916	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.091	1	93.259	92.759	93.759	0.16835								0	0	0	1.0178	1	38977	38977		0.69038	0	1		+		10856	12146	5396	5418	13169	13169					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3497497439384	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.44	1	93.608	93.108	94.108	0.16835								0	0	0	1.0178	1	39116	39116		0.69038	0	1		+		10857	12146	5396	5418	13170	13170					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3486816287041	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.798	1	93.943	93.443	94.443	0.14493								0	0	0	1.0178	1	39262	39262		0.69038	0	1		+		10858	12146	5396	5418	13171	13171					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3487426638603	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.915	1	94.06	93.56	94.56	0.14493								0	0	0	1.0178	1	39310	39310		0.69038	0	1		+		10859	12146	5396	5418	13172	13172					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3496887087822	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.016	1	94.161	93.661	94.661	0.14493								0	0	0	1.0178	1	39351	39351		0.69038	0	1		+		10860	12146	5396	5418	13173	13173					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3496276736259	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.152	1	94.297	93.797	94.797	0.14493								0	0	0	1.0178	1	39406	39406		0.69038	0	1		+		10861	12146	5396	5418	13174	13174					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3493530154228	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.314	1	94.459	93.959	94.959	0.14493								0	0	0	1.0178	1	39474	39474		0.69038	0	1		+		10862	12146	5396	5418	13175	13175					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3495361208916	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.455	1	94.6	94.1	95.1	0.14493								0	0	0	1.0178	1	39533	39533		0.69038	0	1		+		10863	12146	5396	5418	13176	13176					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3501159548759	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.629	1	94.774	94.274	95.274	0.14493								0	0	0	1.0178	1	39603	39603		0.69038	0	1		+		10864	12146	5396	5418	13177	13177					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3490783572197	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.76	1	94.883	94.383	95.383	0.12331								0	0	0	1.0178	1	39656	39656		0.69038	0	1		+		10865	12146	5396	5418	13178	13178					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3520385622978	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.12	1	95.243	94.743	95.743	0.12331								0	0	0	1.0178	1	39804	39804		0.69038	0	1		+		10866	12146	5396	5418	13179	13179					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3515807986259	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.254	1	95.377	94.877	95.877	0.12331								0	0	0	1.0178	1	39860	39860		0.69038	0	1		+		10867	12146	5396	5418	13180	13180					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3502380251884	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.987	1	96.092	95.592	96.592	0.105								0	0	0	1.0178	1	40174	40174		0.69038	0	1		+		10868	12146	5396	5418	13181	13181					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3488647341728	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.206	1	96.311	95.811	96.811	0.105								0	0	0	1.0178	1	40261	40261		0.69038	0	1		+		10869	12146	5396	5418	13182	13182					0.18231195744556317
IKKKKPKQ	8	Unmodified	_IKKKKPKQ_					0	0	0			REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	REV__ENST00000252699.6_1_19:39220693-39220804:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3498718142509	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.335	1	96.44	95.94	96.94	0.105								0	0	0	1.0178	1	40312	40312		0.69038	0	1		+		10870	12146	5396	5418	13183	13183					0.18231195744556317
IKKLHLRVRNG	11	Unmodified	_IKKLHLRVRNG_					0	0	0			REV__AluSx3_dup2817|chr1:247098271-247098577:+|1.0433432231288329|0.445978079987771|1.23|429.0|13|3|sense	REV__AluSx3_dup2817|chr1:247098271-247098577:+|1.0433432231288329|0.445978079987771|1.23|429.0|13|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1207458376884	3	445.289484	1332.84662	2.2149	0.00098627	-2.47	-0.0010999	-0.25513	-0.00011361	445.28837297128104	51.26	0.84207	51.588	51.135	51.977	0.32824					49	26	2	0	0	0	0.14606	1	21311	21311		0.45452	0.45452	1	5837200	+		10871	8116	5397	5419	13184	13184					0.19351222253271771
IKKLLKHH	8	Unmodified	_IKKLLKHH_					0	0	0		tr|A0A7D6VPJ9|A0A7D6VPJ9_9CLOTglucose-1-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=rfbFPE=4SV=1	tr|A0A7D6VPJ9|A0A7D6VPJ9_9CLOTglucose-1-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=rfbFPE=4SV=1	tr|A0A7D6VPJ9|A0A7D6VPJ9_9CLOTglucose-1-phosphatecytidylyltransferaseOS=ClostridiumintestinaleOX=36845GN=rfbFPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8405029177666	2	508.840011	1015.66547	3.5129	0.0017875	-2.7126	-0.0013803	0.80032	0.00040724	508.8384978418301	106.07	0.25745	106.23	106.12	106.37	0.15781					42	13	5	0	0	0	0.89178	1	45305	45305		0.69038	0	1	994120000			10872	16769	5398	5420	13185	13185					0.1582632894735525
IKKQLQRMRKK	11	Unmodified	_IKKQLQRMRKK_					0	0	0			REV__NAT10-SLC3A2|1|fusion	REV__NAT10-SLC3A2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	728.9711181521416	2	728.96648	1455.91841	2.6457	0.0019286	3.3192	0.0024196	5.9649	0.0043482	728.9689611582936	105.76	0.12936	105.93	105.85	105.97	0.16679					20	6	4	0	0	0	1.0402	1	45063	45063		0	0	1	55949000	+		10873	9936	5399	5421	13186	13186					0.20868393615455716
IKKRLETLREW	11	Unmodified	_IKKRLETLREW_					0	0	0			REV__tr|A0A7D7A1L8|A0A7D7A1L8_9CLOTPyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15885PE=4SV=1	REV__tr|A0A7D7A1L8|A0A7D7A1L8_9CLOTPyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15885PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2989990115166	3	491.296304	1470.86708	3.375	0.0016581	1.8203	0.00089429	5.1953	0.0025524	491.2972069798596	97.762	0.096245	98.018	97.967	98.063	0.25636					5	3	2	0	0	0	1.0402	1	41135	41135		0.094841	0.011491	1	15819000	+		10874	15829	5400	5422	13187	13187					0.1504834812237732
IKKTPKKV	8	Unmodified	_IKKTPKKV_					0	0	0		ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3318054080009	2	471.328945	940.643337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.72	1	108.88	108.38	109.38	0.1548								0	0	0	1.0178	1	47002	47002		2.0598	1.2661	1				10875	2234	5401	5423	13188	13188					0.17064104478924946
IKKTPKKV	8	Unmodified	_IKKTPKKV_					0	0	0		ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	ENSG00000124575|ENST00000244534|H1-3	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3326293826103	2	471.328945	940.643337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.82	1	108.98	108.48	109.48	0.1548								0	0	0	1.0178	1	47064	47064		0.52476	0.52476	1				10876	2234	5401	5423	13189	13189					0.17064104478924946
IKLDHLHVF	9	Unmodified	_IKLDHLHVF_					0	0	0			REV__tr|A0A553SF13|A0A553SF13_NIACIN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_08115PE=4SV=1	REV__tr|A0A553SF13|A0A553SF13_NIACIN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_08115PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.5785705447197	3	374.553715	1120.63931	-0.23941	-8.9673E-05	1.5863	0.00059415	1.3469	0.00050447	374.55499101962204	31.784	0.15234	33.066	32.957	33.11	1.2813					6	4	2	0	0	0	0.11837	1	13338	13338		4.897	0.70751	1	321070	+		10877	14682	5402	5424	13190	13190					0.08382014985227215
IKLDISRTF	9	Unmodified	_IKLDISRTF_					0	0	0		ENSG00000108239|ENST00000225235|TBC1D12;ENST00000485048.1_1_10:96269762-96290973:+|nuORF;nc|ENSG00000132405|Q9P2M4-2|TBC1D14;ENSG00000132405|ENST00000409757|TBC1D14	ENSG00000108239|ENST00000225235|TBC1D12	ENSG00000108239|ENST00000225235|TBC1D12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8234741091728	2	546.824224	1091.63389	2.0393	0.0011151	-3.4668	-0.0018957	-1.4275	-0.00078058	546.8230816540763	43.444	0.2919	45.388	45.255	45.546	1.9438					15	9	2	0	0	0	0.70108	1	18258	18258		7.2892	0.56607	1	1187100			10878	1626	5403	5425	13191	13191					0.09174291402746348
IKLHKIPVW	9	Unmodified	_IKLHKIPVW_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|20|1|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|20|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5784789919853	3	378.577972	1132.71209	0.50186	0.00018999	1.6123	0.00061038	2.1142	0.00080037	378.5788022668036	28.964	0.753	30.763	30.298	31.051	1.7987					82	24	6	0	0	0	0.85206	2	11986	11986;12085		0.26902	0	1	143200000	+		10879	14212	5404	5426	13192;13193	13192					0.15103768778658377
IKLHRRYLKRY	11	Unmodified	_IKLHRRYLKRY_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|11|1|sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|11|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	773.2688476443291	2	773.478069	1544.94158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.369	1	99.567	99.067	100.07	0.19767								0	0	0	0.63775	1	41832	41832		0.30703	0.30703	1		+		10880	14270	5405	5427	13194	13194					0.19091155724436248
IKLIKETFFF	10	Unmodified	_IKLIKETFFF_					0	0	0			REV__nc|ENSG00000104635|Q15043-2|SLC39A14	REV__nc|ENSG00000104635|Q15043-2|SLC39A14	MSMS	GG20161007_CRH_Patient100_W632_02	4	643.3809081912041	2	643.381374	1284.7482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.31	1	19.758	19.258	20.258	1.448								0	0	0	0.66237	1	7615	7615		0.45834	0	1		+		10881	9140	5406	5428	13195	13195					0.11721181164830341
IKLLWKYKKLF	11	Unmodified	_IKLLWKYKKLF_					0	0	0		ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1018859744072	4	370.741708	1478.93773	1.7241	0.00063918	-0.59376	-0.00022013	1.1303	0.00041905	370.99196121625374	62.62	0.78128	62.95	62.85	63.631	0.32974					31	24	2	0	0	0	0.14606	1	26254	26254		0	0	1	2092000			10882	6772	5407	5429	13196	13196					0.21741673177984921
IKLLWKYKKLF	11	Unmodified	_IKLLWKYKKLF_					0	0	0		ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1020995974541	4	370.741708	1478.93773	1.9647	0.00072839	-0.0431	-1.5979E-05	1.9216	0.00071241	370.99213729530356	61.692	0.28204	63.11	62.988	63.27	1.4177					10	8	2	0	0	0	0.14606	1	25870	25870		0	0	1	830080			10883	6772	5407	5429	13197	13197					0.21741673177984921
IKLLWKYKKLF	11	Unmodified	_IKLLWKYKKLF_					0	0	0		ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	ENST00000474385.1_1_X:24195956-24197386:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1022216677666	4	370.741708	1478.93773	2.8078	0.001041	-0.8711	-0.00032295	1.9367	0.00071802	370.99132447181495	60.703	0.39909	62.669	62.482	62.881	1.9653					17	12	2	0	0	0	0.14606	1	25427	25427		0	0	1	1402300			10884	6772	5407	5429	13198	13198					0.21741673177984921
IKLRYYKLL	9	Unmodified	_IKLRYYKLL_					0	0	0			REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1989013552666	4	303.198405	1208.76451	-0.66004	-0.00020012	1.632	0.00049481	0.97193	0.00029469	303.19880336818323	32.401	0.78024	33.679	33.168	33.949	1.2782					60	26	4	0	0	0	0.847	1	13582	13582		0.96228	0.26461	1	7402200	+		10885	12674	5408	5430	13199	13199					0.16848307121586004
IKLRYYKLL	9	Unmodified	_IKLRYYKLL_					0	0	0			REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1987182497978	4	303.198405	1208.76451	-0.70847	-0.00021481	1.9831	0.00060127	1.2746	0.00038646	303.1990925715122	32.856	0.69382	34.135	33.887	34.581	1.2782					66	30	4	0	0	0	0.847	1	13777	13777		0.96228	0.26461	1	5954400	+		10886	12674	5408	5430	13200	13200					0.16848307121586004
IKLRYYKLL	9	Unmodified	_IKLRYYKLL_					0	0	0			REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1989013552666	4	303.198405	1208.76451	0.17378	5.269E-05	1.37	0.00041539	1.5438	0.00046808	303.1987753914413	31.467	0.77247	33.292	33.075	33.848	1.8246					78	28	4	0	0	0	0.847	2	13338	13338;13384		0.96228	0.26461	1	10885000	+		10887	12674	5408	5430	13201;13202	13201					0.16848307121586004
IKLRYYKLL	9	Unmodified	_IKLRYYKLL_					0	0	0			REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	REV__ENST00000371728.7_1_10:91477194-91477239:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1989013552666	4	303.198405	1208.76451	0.16026	4.859E-05	1.0072	0.00030537	1.1674	0.00035396	303.1985862636281	32.312	0.76095	34.136	33.818	34.579	1.8246					68	28	4	0	0	0	0.847	1	13550	13550		0.96228	0.26461	1	6319200	+		10888	12674	5408	5430	13203	13203					0.16848307121586004
IKLYIYILKSL	11	Unmodified	_IKLYIYILKSL_					0	0	0		ENST00000398148.7_3_19:6413682-6414126:-|nuORF	ENST00000398148.7_3_19:6413682-6414126:-|nuORF	ENST00000398148.7_3_19:6413682-6414126:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2983886599541	3	456.29513	1365.86356	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.17	103.67	104.67	0.16055								0	0	0	0.63775	1	43984	43984		0.08335	0	1				10889	6321	5409	5431	13204	13204					0.19526285295842172
IKRAAASR	8	Unmodified	_IKRAAASR_					0	0	0		ENST00000407916.2_1_7:55001700-55002231:+|nuORF	ENST00000407916.2_1_7:55001700-55002231:+|nuORF	ENST00000407916.2_1_7:55001700-55002231:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	436.7753784060478	2	436.774868	871.535184	1.2841	0.00056085	-1.0969	-0.00047909	0.18719	8.1758E-05	436.7744327057761	73.507	1.4681	73.507	73.153	74.621	0					113	46	5	0	0	0	0.89181	1	30659	30659		0.6015	0	1	353690000			10890	6371	5410	5432	13205	13205					0.0942773294835888
IKRKIAPVKR	10	Unmodified	_IKRKIAPVKR_					0	0	0		nc|ENSG00000151849|Q9HC77-2|CENPJ;CENPJ|p.E961Vfs*3|1|0.06|ENSG00000151849|chr13:24899528-24899529|-/A|frameshift_variant;CENPJ|p.E961Rfs*3|1|0.04|ENSG00000151849|chr13:24899529-24899530|-/T|frameshift_variant;ENSG00000151849|ENST00000381884|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	nc|ENSG00000151849|Q9HC77-2|CENPJ	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9236938357353	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.069	1	15.069	14.569	15.569	0								0	0	0	0.66176	1	6255	6255		1.4819	1.0812	1				10891	7896	5411	5433	13206	13206					0.228496228556196
IKRTTRAA	8	Unmodified	_IKRTTRAA_					0	0	0			REV__ENST00000394997.5_1_14:62162478-62187101:+|nuORF	REV__ENST00000394997.5_1_14:62162478-62187101:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	458.7884704470634	2	458.787976	915.561398	2.9157	0.0013377	-1.8516	-0.00084951	1.0641	0.0004882	458.78710957741566	76.155	1.3721	76.476	76.112	77.484	0.32163					82	43	3	0	0	0	0.89198	1	31848	31848		0	0	1	404520000	+		10892	12833	5412	5434	13207	13207					0.10024002119826037
IKVIPTLALLK	11	Unmodified	_IKVIPTLALLK_					0	0	0		TXNDC9-EIF5B|1|fusion;ENST00000463385.5_1_2:99938416-99949470:-|nuORF;nc|ENSG00000115514|O14530-2|TXNDC9;ENSG00000115514|ENST00000264255|TXNDC9	TXNDC9-EIF5B|1|fusion	TXNDC9-EIF5B|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9234496951103	2	604.920667	1207.82678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.216	1	15.216	14.716	15.716	0								0	0	0	0.63775	1	6316	6316		5.2969	1.7004	1				10893	17347	5413	5435	13208	13208					0.23118033469927468
IKWFFHVI	8	Unmodified	_IKWFFHVI_					0	0	0		P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant;nc|ENSG00000089041|Q99572-2|P2RX7;ENSG00000089041|ENST00000328963|P2RX7;nc|ENSG00000089041|Q99572-3|P2RX7;ENST00000539695.5_1_12:121570737-121600081:+|nuORF;nc|ENSG00000089041|Q99572-5|P2RX7	P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant	P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3193237185478	2	545.315838	1088.61712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.539	1	73.864	73.364	74.364	0.32494								0	0	0	1.0178	1	30767	30767		0.79363	0	1				10894	1115	5414	5436	13209	13209					0.07635835307473826
IKWREIPSVI	10	Unmodified	_IKWREIPSVI_					0	0	0			REV__tr|A0A7D6ZSB5|A0A7D6ZSB5_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07115PE=3SV=1	REV__tr|A0A7D6ZSB5|A0A7D6ZSB5_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07115PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	414.2541992068291	3	414.251924	1239.73394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	104.05	103.55	104.55	0.059502								0	0	0	0.66227	1	43768	43768		0.62683	0.17231	1		+		10895	15704	5415	5437	13210	13210					0.12366528736538385
IKWRRRRRRRR	11	Unmodified	_IKWRRRRRRRR_					0	0	0		ENST00000303961.8_1_19:41306371-41306464:+|nuORF	ENST00000303961.8_1_19:41306371-41306464:+|nuORF	ENST00000303961.8_1_19:41306371-41306464:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	848.0457641482353	2	848.046173	1694.07779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.761	1	97.989	97.489	98.489	0.22776								0	0	0	0.63775	1	41143	41143		0	0	1				10896	5770	5416	5438	13211	13211					0.25851707798278767
ILAAPITSKV	10	Unmodified	_ILAAPITSKV_					0	0	0		tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8254882693291	2	506.823692	1011.63283	2.1279	0.0010785	1.2033	0.00060988	3.3313	0.0016884	506.824388946471	46.423	0.27541	46.423	46.261	46.536	0					14	8	2	0	0	0	0.69361	1	19433	19433		27.629	2.2295	1	956030			10897	16547	5417	5439	13212	13212					0.1274807703384795
ILAAPITSKV	10	Unmodified	_ILAAPITSKV_					0	0	0		tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8255187869072	2	506.823692	1011.63283	2.1638	0.0010967	1.0057	0.00050971	3.1695	0.0016064	506.82439639576086	43.631	0.21517	45.574	45.455	45.67	1.9438					17	6	3	0	0	0	0.25434	1	18286	18286		58.679	10.333	1	2143100			10898	16547	5417	5439	13213	13213					0.1274807703384795
ILAAPITSKV	10	Unmodified	_ILAAPITSKV_					0	0	0		tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	tr|A0A553SR96|A0A553SR96_NIACIDUF3533domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00495PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	506.823692	1011.63283	2.6545	0.0013454	0.43756	0.00022177	3.092	0.0015671	506.8240505757271	44.257	0.25657	45.611	45.47	45.727	1.3536	0.018092	-0.00028747	NaN	58.679	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2507800			10899	16547	5417	5439							0.1274807703384795
ILAATLHPH	9	Unmodified	_ILAATLHPH_					0	0	0			REV__ENST00000373222.3_1_20:40162013-40162172:-|nuORF	REV__ENST00000373222.3_1_20:40162013-40162172:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7868835330009	2	486.784902	971.55525	2.3352	0.0011367	0.58252	0.00028356	2.9177	0.0014203	486.78536382608877	38.725	0.26446	39.033	38.888	39.152	0.30857					16	8	2	0	0	0	0.24063	1	16315	16315		28.487	0	1	1576400	+		10900	12695	5418	5440	13214	13214					0.0683348388831746
ILADIVISA	9	Unmodified	_ILADIVISA_					0	0	0		ENSG00000065911|ENST00000394053|MTHFD2;nc|ENSG00000065911|P13995-2|MTHFD2;ENST00000320415.6_1_7:82219286-82219658:-|nuORF	ENSG00000065911|ENST00000394053|MTHFD2	ENSG00000065911|ENST00000394053|MTHFD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.5577270388603	1	914.55571	913.548434	1.7086	0.0015626	-0.027741	-2.5371E-05	1.6808	0.0015372	914.5551961345658	65.388	0.58388	67.296	67.032	67.616	1.9085					27	18	2	0	0	0	0.20671	1	27400	27400		32.305	1.6689	1	1449300			10901	796	5419	5441	13215	13215					0.08820126217096913
ILADMVDKCIQ	11	Unmodified	_ILADMVDKCIQ_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	624.8227416872978	2	624.819966	1247.62538	2.3255	0.001453	2.6635	0.0016642	4.989	0.0031172	624.8218641101153	92.531	0.48521	92.531	92.258	92.744	0					45	15	4	0	0	0	0.50855	1	38670	38670		23.79	1.0535	1	4171200	+		10902	9799	5420	5442	13216	13216					0.011472333796291423
ILADTFIGV	9	Unmodified	_ILADTFIGV_					0	0	0		nc|ENSG00000164659|A8MWY0-2|ELAPOR2;nc|ENSG00000164659|A8MWY0-3|ELAPOR2;ENSG00000164659|ENST00000450689|ELAPOR2	nc|ENSG00000164659|A8MWY0-2|ELAPOR2	nc|ENSG00000164659|A8MWY0-2|ELAPOR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.5417968630791	1	948.54006	947.532783	1.8916	0.0017943	-0.25187	-0.00023891	1.6397	0.0015554	948.5396777453299	72.183	0.31944	72.508	72.291	72.611	0.32494					13	9	2	0	0	0	0.15478	1	30223	30223		38.151	9.6643	1	604130			10903	3790	5421	5443	13217	13217					0.056918397000458754
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.8006469607353	2	530.799883	1059.58521	1.6642	0.00088338	0.22382	0.0001188	1.8881	0.0010022	530.7993517041771	68.764	0.34465	68.764	68.517	68.862	0					18	10	2	0	0	0	0.15478	2	28635	28586;28635		38.151	21.209	1	1107800			10904	615	5422	5444	13218;13219	13219					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1060.597338855267	1	1060.59249	1059.58521	1.6778	0.0017795	1.1413	0.0012105	2.8192	0.00299	1060.5934003860016	68.725	0.34398	68.725	68.549	68.893	0					20	10	3	0	0	0	0.11478	2	28649	28603;28649		44.407	27.465	1	1049700			10905	615	5422	5444	13220;13221	13221					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1060.595507800579	1	1060.59249	1059.58521	2.2139	0.0023481	1.678	0.0017797	3.892	0.0041278	1060.5935593589904	68.28	0.34369	68.602	68.377	68.721	0.32224					19	10	2	0	0	0	0.09539	2	28541	28541;28596		50.855	23.971	1	1188400			10906	615	5422	5444	13222;13223	13222					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8006469607353	2	530.799883	1059.58521	1.7154	0.00091054	0.6348	0.00033695	2.3502	0.0012475	530.7999105551428	68.228	0.37572	68.55	68.345	68.721	0.32224					18	11	2	0	0	0	0.22519	2	28556	28556;28605		30.225	14.378	1	1883800			10907	615	5422	5444	13224;13225	13224					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1060.594653308392	1	1060.59249	1059.58521	2.4167	0.0025632	-0.41208	-0.00043705	2.0047	0.0021261	1060.5920122793461	67.061	0.39809	68.449	68.246	68.644	1.3888					28	12	3	0	0	0	0.028763	2	28140	28090;28140		89.427	49.469	1	4095400			10908	615	5422	5444	13226;13227	13227					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7994262576103	2	530.799883	1059.58521	1.8354	0.00097421	0.56425	0.0002995	2.3996	0.0012737	530.7980605912237	67.045	0.39908	68.434	68.215	68.614	1.3887					24	12	3	0	0	0	0.11478	1	28123	28123		44.407	15.92	1	3503200			10909	615	5422	5444	13228	13228					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1060.598437488079	1	1060.59249	1059.58521	2.2192	0.0023536	-1.0609	-0.0011252	1.1583	0.0012285	1060.5914140920656	66.622	0.37052	68.511	68.245	68.616	1.8889					26	11	3	0	0	0	0.028763	2	27890	27890;27942		89.427	53.3	1	2657200			10910	615	5422	5444	13229;13230	13229					0.0578037804300493
ILAEEPIYI	9	Unmodified	_ILAEEPIYI_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7999755740166	2	530.799883	1059.58521	1.7574	0.00093284	-0.80313	-0.0004263	0.95428	0.00050653	530.7981847445711	66.541	0.40022	68.43	68.245	68.646	1.8889					24	12	3	0	0	0	0.11478	2	27901	27901;27953		44.407	22.66	1	6017600			10911	615	5422	5444	13231;13232	13231					0.0578037804300493
ILAEEPIYIRV	11	Unmodified	_ILAEEPIYIRV_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	658.8884155154228	2	658.384645	1314.75474	2.7819	0.0018315	0.90057	0.00059292	3.6824	0.0024245	658.3850802202824	60.417	0.3378	61.837	61.626	61.964	1.4196					23	10	3	0	0	0	0.040846	2	25322	25322;25372		69.338	49.976	1	2915500			10912	615	5423	5445	13233;13234	13233					0.10995074325546739
ILAEEPIYIRV	11	Unmodified	_ILAEEPIYIRV_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	658.8874999880791	2	658.384645	1314.75474	2.9549	0.0019455	-0.27995	-0.00018431	2.675	0.0017612	658.3842264337612	59.934	0.27972	61.903	61.733	62.012	1.969					20	8	3	0	0	0	0.0087106	1	25138	25138		107.1	51.597	1	3095200			10913	615	5423	5445	13235	13235					0.10995074325546739
ILAEEPIYIRV	11	Unmodified	_ILAEEPIYIRV_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	658.384645	1314.75474	2.4373	0.0016046	0.16124	0.00010616	2.5985	0.0017108	658.8866204811776	62.169	0.28078	62.169	62.055	62.336	0	0.20043	-0.00031439	NaN	107.1	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	988820			10914	615	5423	5445							0.10995074325546739
ILAEEPIYIRV	11	Unmodified	_ILAEEPIYIRV_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	658.384645	1314.75474	1.9247	0.0012672	0.61422	0.00040439	2.5389	0.0016716	658.3850329322634	61.635	0.27677	61.965	61.796	62.073	0.32974	-0.0031743	0.00028208	NaN	107.1	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1169900			10915	615	5423	5445							0.10995074325546739
ILAEEQFIL	9	Unmodified	_ILAEEQFIL_					0	0	0		ENSG00000137100|ENST00000259632|DCTN3;nc|ENSG00000137100|O75935-2|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	ENSG00000137100|ENST00000259632|DCTN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3037597537041	2	538.305332	1074.59611	3.4439	0.0018538	-0.79046	-0.00042551	2.6534	0.0014283	538.3049383667468	74.485	0.72752	75.803	75.374	76.101	1.318					57	23	3	0	0	0	0.076627	1	31181	31181		57.471	28.985	1	43933000			10916	2758	5424	5446	13236	13236					0.06179780417301117
ILAELLLRV	9	Unmodified	_ILAELLLRV_					0	0	0		ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3510619997978	2	520.347335	1038.68012	2.7114	0.0014109	1.5553	0.00080932	4.2667	0.0022202	520.3481039398015	76.545	0.52892	77.839	77.639	78.168	1.2938					36	16	3	0	0	0	0.086433	2	32102	32102;32154		53.833	9.9745	1	4625600			10917	2592	5425	5447	13237;13238	13237					0.1623235630486306
ILAELLLRV	9	Unmodified	_ILAELLLRV_					0	0	0		ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3502075076103	2	520.347335	1038.68012	2.7653	0.0014389	0.8162	0.00042471	3.5815	0.0018636	520.3477554004673	76.011	0.62231	77.778	77.568	78.19	1.7672					39	19	3	0	0	0	0.093059	2	31855	31855;31922		51.63	9.094	1	2618000			10918	2592	5425	5447	13239;13240	13239					0.1623235630486306
ILAELLLRV	9	Unmodified	_ILAELLLRV_					0	0	0		ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	520.347335	1038.68012	2.0197	0.0010509	1.7608	0.00091622	3.7804	0.0019671	520.3484986792988	78.232	0.31355	78.232	78.064	78.377	0	0.28617	0.00063734	NaN	53.833	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899280			10919	2592	5425	5447							0.1623235630486306
ILAELLLRV	9	Unmodified	_ILAELLLRV_					0	0	0		ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	ENSG00000134058|ENST00000256443|CDK7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	520.347335	1038.68012	2.1092	0.0010975	0.70503	0.00036686	2.8142	0.0014644	520.347406948559	77.618	0.40704	77.935	77.764	78.171	0.31653	-0.011007	-0.00046137	NaN	53.833	22	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1386700			10920	2592	5425	5447							0.1623235630486306
ILAHECHDDM	10	Unmodified	_ILAHECHDDM_					0	0	0			REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.7468749880791	2	592.247166	1182.47978	1.2299	0.00072842	-1.9093	-0.0011308	-0.67933	-0.00040233	592.246188916641	53.688	0.27945	55.088	54.975	55.255	1.4005					18	10	2	0	0	0	0.80568	1	22469	22469		11.64	3.4848	1	4946500	+		10921	13231	5426	5448	13241	13241					-0.10416229416591705
ILAHECHDDM	10	Unmodified	_ILAHECHDDM_					0	0	0			REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.2475463747978	2	592.247166	1182.47978	0.74411	0.0004407	-1.1678	-0.00069164	-0.42372	-0.00025094	592.2468580286842	53.182	0.27485	55.152	55.02	55.295	1.9697					24	11	4	0	0	0	0.846	1	22266	22266		7.2892	2.5332	1	3850400	+		10922	13231	5426	5448	13242	13242					-0.10416229416591705
ILAHECHDDM	10	Unmodified	_ILAHECHDDM_					0	0	0			REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	592.247166	1182.47978	1.2299	0.00072842	-1.9093	-0.0011308	-0.67933	-0.00040233	592.246188916641	53.688	0.27945	55.088	54.975	55.255	1.4005	-0.031563	-0.00048358	NaN	11.64	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4946500	+		10923	13231	5426	5448							-0.10416229416591705
ILAHECHDDM	10	Unmodified	_ILAHECHDDM_					0	0	0			REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	REV__ENST00000464950.6_1_1:54317686-54317740:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	592.247166	1182.47978	0.74411	0.0004407	-1.1678	-0.00069164	-0.42372	-0.00025094	592.2468580286842	53.182	0.27485	55.152	55.02	55.295	1.9697	0.031563	0.00039464	NaN	11.64	24	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3850400	+		10924	13231	5426	5448							-0.10416229416591705
ILAHFLRG	8	Unmodified	_ILAHFLRG_					0	0	0		ENSG00000133393|ENST00000255759|CEP20	ENSG00000133393|ENST00000255759|CEP20	ENSG00000133393|ENST00000255759|CEP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	3	309.523867	925.549771	-0.11392	-3.5262E-05	1.7084	0.0005288	1.5945	0.00049354	309.52434248858873	23.803	0.47948	25.488	25.243	25.722	1.6845					44	15	5	0	0	0	0.89124	1	9968	9968		1.8442	0	1	15722000			10925	2570	5427	5449	13243	13243					0.08401805096514181
ILAILLLPVS	10	Unmodified	_ILAILLLPVS_					0	0	0			REV__tr|A0A553SK69|A0A553SK69_NIACICytochromeCassemblyproteinOS=NialliacirculansOX=1397GN=CEQ21_18240PE=4SV=1	REV__tr|A0A553SK69|A0A553SK69_NIACICytochromeCassemblyproteinOS=NialliacirculansOX=1397GN=CEQ21_18240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2433959841728	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	1	7468	7468		0.69767	0.49081	1	364430000	+		10926	14936	5428	5450	13244	13244					0.1819441110740172
ILAKKLFGIYN	11	Unmodified	_ILAKKLFGIYN_					0	0	0			REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	REV__tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7006103396416	4	320.699775	1278.76999	1.0696	0.00034303	1.764	0.00056572	2.8336	0.00090875	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	1.0365	1	17154	17154		1.2148	0	1	367210000	+		10927	15348	5429	5451	13245	13245					0.14175985913425393
ILALNHISL	9	Unmodified	_ILALNHISL_					0	0	0		ENST00000486151.5_1_10:49386068-49414901:-|nuORF;nc|ENSG00000170324|Q68DX3-2|FRMPD2;ENSG00000170324|ENST00000374201|FRMPD2	ENST00000486151.5_1_10:49386068-49414901:-|nuORF	ENST00000486151.5_1_10:49386068-49414901:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.3121520876884	2	497.30821	992.601866	1.5805	0.00078602	-0.077026	-3.8306E-05	1.5035	0.00074771	497.3082905798191	76.419	0.58605	76.419	76.164	76.75	0					42	18	3	0	0	0	0.66839	1	31734	31734		8.5933	0	1	6682900			10928	4137	5430	5452	13246	13246					0.10526923719623937
ILANIKKVL	9	Unmodified	_ILANIKKVL_					0	0	0		tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.1804382205009	3	337.902344	1010.6852	1.4413	0.00048703	-1.6298	-0.00055072	-0.18849	-6.369E-05	337.90188730122173	68.528	1.0523	70.381	69.657	70.709	1.853					56	33	2	0	0	0	0.11581	1	28751	28751		7.609	0.50723	1	643690			10929	17021	5431	5453	13247	13247					0.18028660167453836
ILAPAGSLPKI	11	Unmodified	_ILAPAGSLPKI_					0	0	0		ENSG00000120942|ENST00000376810|UBIAD1	ENSG00000120942|ENST00000376810|UBIAD1	ENSG00000120942|ENST00000376810|UBIAD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3452636599541	2	540.344792	1078.67503	1.775	0.00095911	0.58798	0.00031771	2.363	0.0012768	540.3443156354023	53.683	0.31871	53.683	53.489	53.808	0					13	9	2	0	0	0	0.84918	1	22394	22394		12.873	1.2323	1	479960			10930	2124	5432	5454	13248	13248					0.13884052442244865
ILAQQPDRL	9	Unmodified	_ILAQQPDRL_					0	0	0		nc|ENSG00000102871|Q15628-2|TRADD;ENSG00000102871|ENST00000345057|TRADD	nc|ENSG00000102871|Q15628-2|TRADD	nc|ENSG00000102871|Q15628-2|TRADD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3055908083916	2	527.306198	1052.59784	2.7389	0.0014442	-2.8524	-0.0015041	-0.11354	-5.9868E-05	527.3044525582318	82.961	0.4298	84.173	83.951	84.381	1.2125					32	13	3	0	0	0	0.76456	1	34816	34816		4.756	0	1	2894700			10931	1400	5433	5455	13249	13249					0.07364834225904815
ILARNLVPM	9	Unmodified	_ILARNLVPM_					0	0	0		sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1;sp|P06725|PP65_HCMVA65kDaphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL83PE=1SV=2	sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1	sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8752319216728	3	342.8758	1025.60557	-1.4852	-0.00050925	2.7048	0.00092743	1.2196	0.00041817	342.8765924607928	40.18	1.0974	40.18	39.544	40.642	0					99	34	4	0	0	0	0.8462	1	16974	16974		1.0715	0.10919	1	8171300			10932	15988	5434	5456	13250	13250					0.09379270221802471
ILASVILNV	9	Unmodified	_ILASVILNV_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3080627322197	2	471.305136	940.595718	2.7253	0.0012844	0.14408	6.7906E-05	2.8693	0.0013523	471.3056306375306	76.548	0.43704	77.842	77.669	78.106	1.2938					28	13	3	0	0	0	0.046276	1	32133	32133		70.716	3.3717	1	2960200			10933	4708	5435	5457	13251	13251					0.12304405488100656
ILASVILNV	9	Unmodified	_ILASVILNV_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3065368533134	2	471.305136	940.595718	3.1058	0.0014638	-0.086939	-4.0975E-05	3.0189	0.0014228	471.30506127030975	76.03	0.37578	77.798	77.627	78.003	1.7672					21	11	2	0	0	0	0.046276	1	31906	31906		70.716	13.244	1	1745200			10934	4708	5435	5457	13252	13252					0.12304405488100656
ILASVILNV	9	Unmodified	_ILASVILNV_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	471.305136	940.595718	2.2802	0.0010747	-0.68384	-0.0003223	1.5963	0.00075235	471.3038891414327	78.078	0.34679	78.078	77.873	78.22	0	0.17232	-0.0007043	NaN	70.716	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	891880			10935	4708	5435	5457							0.12304405488100656
ILASVILNV	9	Unmodified	_ILASVILNV_					0	0	0		ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	ENSG00000184785|ENST00000330288|SMIM10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	471.305136	940.595718	2.6882	0.001267	0.72336	0.00034092	3.4115	0.0016079	471.30557822352597	77.588	0.31344	77.904	77.732	78.045	0.31653	-0.0010981	0.00062215	NaN	70.716	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	772730			10936	4708	5435	5457							0.12304405488100656
ILAVDDEIVV	10	Unmodified	_ILAVDDEIVV_					0	0	0		ENST00000539508.5_1_9:13106966-13133978:-|nuORF;nc|ENSG00000107186|O75970-5|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-2|MPDZ;ENSG00000107186|ENST00000319217|MPDZ	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3074218630791	2	543.308072	1084.60159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.71	1	48.681	48.181	49.181	1.9703								0	0	0	0.45714	1	19567	19567		26.884	5.137	1				10937	1593	5436	5458	13253	13253					0.06267459209084336
ILAYFLGRLIS	11	Unmodified	_ILAYFLGRLIS_					0	0	0		tr|A0A553SQ20|A0A553SQ20_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16280PE=3SV=1	tr|A0A553SQ20|A0A553SQ20_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16280PE=3SV=1	tr|A0A553SQ20|A0A553SQ20_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16280PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5927001833916	3	422.592058	1264.75434	0.67704	0.00028611	1.0181	0.00043022	1.6951	0.00071633	422.59229849815495	37.267	0.50903	37.267	36.985	37.494	0					53	25	3	0	0	0	1.0118	1	15535	15535		3.0723	0	1	5841400			10938	16492	5437	5459	13254	13254					0.13255699396404452
ILAYLVVWV	9	Unmodified	_ILAYLVVWV_					0	0	0		ENST00000547933.1_1_17:3593719-3599299:-|nuORF;P2RX5|p.D187Tfs*6|1|0.11|ENSG00000083454|chr17:3690125-3690125|C/-|frameshift_variant;nc|ENSG00000083454|Q93086-2|P2RX5;nc|ENSG00000083454|Q93086-5|P2RX5;nc|ENSG00000083454|Q93086-1|P2RX5;ENSG00000083454|ENST00000225328|P2RX5;nc|ENSG00000083454|Q93086-4|P2RX5;nc|ENSG00000083454|Q93086|P2RX5	ENST00000547933.1_1_17:3593719-3599299:-|nuORF	ENST00000547933.1_1_17:3593719-3599299:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	538.7997924685478	2	538.331153	1074.64775	1.6568	0.00089188	-3.1311	-0.0016856	-1.4744	-0.0007937	538.3292163712305	78.361	0.50475	78.361	78.251	78.756	0					19	15	2	0	0	0	0.11109	1	32588	32588		14.582	0	1	703540			10939	1041	5438	5460	13255	13255					0.11341568901843857
ILCAVFRL	8	Unmodified	_ILCAVFRL_					0	0	0		ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	ENSG00000176787|ENST00000321522|OR52E2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	934.5623657107353	1	934.55427	933.546994	2.8388	0.002653	1.8706	0.0017481	4.7094	0.0044012	934.5573317879515	80.34	0.24786	81.591	81.45	81.698	1.2512					12	7	2	0	0	0	0.84707	1	33716	33716		17.087	1.3183	1	1487700			10940	4419	5439	5461	13256	13256					0.07756213647360255
ILCCHAWK	8	Unmodified	_ILCCHAWK_					0	0	0		nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-3|DNAH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1639587283134	3	325.163064	972.467363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.06	1	101.12	100.62	101.62	0.067009								0	0	0	1.0178	1	42307	42307		0.45834	0	1				10941	7946	5440	5462	13257	13257					-0.019971762983118424
ILCLCVMILL	10	Unmodified	_ILCLCVMILL_					0	0	0			REV__ENST00000487556.5_1_1:43300740-43305721:+|nuORF	REV__ENST00000487556.5_1_1:43300740-43305721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3291503787041	2	567.328384	1132.64222	0.5239	0.00029722	-0.25568	-0.00014506	0.26821	0.00015216	567.3279229984126	22.155	0.4316	23.771	23.61	24.041	1.6158					28	13	3	0	0	0	0.79742	1	9321	9321		12.532	0.89125	1	871840	+		10942	10711	5441	5463	13258	13258					0.08120062731882172
ILCQDWRH	8	Unmodified	_ILCQDWRH_					0	0	0			REV__ENST00000320230.9_1_11:791329-791734:-|nuORF	REV__ENST00000320230.9_1_11:791329-791734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1072.526782214642	1	1070.52001	1069.51273	2.5816	0.0027636	2.376	0.0025436	4.9576	0.0053072	1070.5240074870267	68.322	0.33705	69.7	69.491	69.828	1.3778					26	10	3	0	0	0	0.88791	1	28635	28635		3.9444	0.94915	1	2455500	+		10943	12400	5442	5464	13259	13259					-0.01924234511557188
ILCVCEYFQL	10	Unmodified	_ILCVCEYFQL_					0	0	0		ENST00000591556.1_1_17:40458135-40460407:+|nuORF	ENST00000591556.1_1_17:40458135-40460407:+|nuORF	ENST00000591556.1_1_17:40458135-40460407:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	616.3515502810478	2	615.798503	1229.58245	2.1784	0.0013415	0.48382	0.00029794	2.6622	0.0016394	615.7984130710521	74.994	1.0084	74.994	74.462	75.471	0					52	31	3	0	0	0	0.12519	1	31058	31058		7.2892	0	1	627670			10944	7486	5443	5465	13260	13260					-0.02315536677815544
ILCWNEIE	8	Unmodified	_ILCWNEIE_					0	0	0			REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	REV__tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2502929568291	2	510.24696	1018.47937	4.7121	0.0024043	2.6327	0.0013433	7.3448	0.0037476	510.2482369202853	87.33	0.4012	88.421	88.21	88.612	1.0918					31	12	3	0	0	0	0.87431	1	36810	36810		12.532	0	1	2492900	+		10945	15874	5444	5466	13261	13261					-0.029132810741202775
ILDDMHVNM	9	Unmodified	_ILDDMHVNM_					0	0	0			REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.2495605349541	2	544.249177	1086.4838	2.1939	0.001194	-2.2388	-0.0012184	-0.044858	-2.4414E-05	544.2481877961138	56.337	0.25663	56.658	56.502	56.758	0.32103					14	8	2	0	0	0	0.76456	1	23623	23623		4.756	0	1	1549500	+		10946	15524	5445	5467	13262	13262					-0.05598139922858536
ILDDSHLLV	9	Unmodified	_ILDDSHLLV_					0	0	0		ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7889892458916	2	512.787307	1023.56006	1.868	0.00095787	-0.9704	-0.00049761	0.89756	0.00046026	512.7881611324341	51.529	0.31204	51.855	51.726	52.038	0.32554					23	9	4	0	0	0	0.22519	1	21612	21612		30.225	13.283	1	1211400			10947	614	5446	5468	13263	13263					0.0492232324043016
ILDDSHLLV	9	Unmodified	_ILDDSHLLV_					0	0	0		ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2892944216728	2	512.787307	1023.56006	2.9627	0.0015192	-1.6066	-0.00082385	1.3561	0.00069538	513.2884914507648	50.286	0.53606	51.677	51.324	51.86	1.3911					52	16	5	0	0	0	0.03795	2	21060	21060;21110		77.984	38.027	1	7479800			10948	614	5446	5468	13264;13265	13264					0.0492232324043016
ILDDSHLLV	9	Unmodified	_ILDDSHLLV_					0	0	0		ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7880737185478	2	512.787307	1023.56006	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.843	1	51.821	51.321	52.321	1.9772								0	0	0	0.036752	1	20877	20877		67.344	25.249	1				10949	614	5446	5468	13266	13266					0.0492232324043016
ILDDVSLTHL	10	Unmodified	_ILDDVSLTHL_					0	0	0		ENSG00000167085|ENST00000300408|PHB1	ENSG00000167085|ENST00000300408|PHB1	ENSG00000167085|ENST00000300408|PHB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3123657107353	2	563.311146	1124.60774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.831	1	58.246	57.746	58.746	1.4145								0	0	0	0.004346	1	23819	23819		62.573	20.733	1				10950	3946	5447	5469	13267	13267					0.050419774406236684
ILDEATSSV	9	Unmodified	_ILDEATSSV_					0	0	0		tr|A0A553SUJ8|A0A553SUJ8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00400PE=4SV=1;tr|A0A7D6VP72|A0A7D6VP72_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17620PE=4SV=1;tr|A0A7D6W0S1|A0A7D6W0S1_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00970PE=4SV=1;tr|A0A553SJD3|A0A553SJD3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16585PE=4SV=1;tr|A0A7D6VV20|A0A7D6VV20_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22700PE=4SV=1	tr|A0A553SUJ8|A0A553SUJ8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00400PE=4SV=1	tr|A0A553SUJ8|A0A553SUJ8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00400PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7396728396416	2	467.740022	933.465492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.801	1	47.771	47.271	48.271	1.9703								0	0	0	0.40188	1	19186	19186		8.5933	2.2392	1				10951	16242	5448	5470	13268	13268					-0.003902353015519111
ILDEFKSII	9	Unmodified	_ILDEFKSII_					0	0	0		tr|A0A7D6VPY0|A0A7D6VPY0_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00695PE=4SV=1	tr|A0A7D6VPY0|A0A7D6VPY0_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00695PE=4SV=1	tr|A0A7D6VPY0|A0A7D6VPY0_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3164550662041	2	539.313158	1076.61176	3.3666	0.0018156	2.5004	0.0013485	5.8669	0.0031641	539.3146721856845	93.781	0.52927	95.058	94.828	95.358	1.277					51	16	4	0	0	0	0.37357	1	39451	39451		21.747	3.6117	1	10377000			10952	16778	5449	5471	13269	13269					0.07652066934338109
ILDEVIFKL	9	Unmodified	_ILDEVIFKL_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF;nc|ENSG00000173226|Q15051-3|IQCB1;IQCB1|p.E529Sfs*18|1|0.05|ENSG00000173226|chr3:121770557-121770558|-/AGCCTCCTGAGTAGCTGGGA|frameshift_variant;ENSG00000173226|ENST00000310864|IQCB1	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3330566287041	2	545.33135	1088.64815	1.5955	0.00087007	-0.27281	-0.00014877	1.3227	0.0007213	545.3316497781876	75.631	0.28392	75.631	75.471	75.755	0					16	8	2	0	0	0	0.086433	1	31475	31475		53.833	13.883	1	952310			10953	4274	5450	5472	13270	13270					0.10736943831057033
ILDEVIFKL	9	Unmodified	_ILDEVIFKL_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF;nc|ENSG00000173226|Q15051-3|IQCB1;IQCB1|p.E529Sfs*18|1|0.05|ENSG00000173226|chr3:121770557-121770558|-/AGCCTCCTGAGTAGCTGGGA|frameshift_variant;ENSG00000173226|ENST00000310864|IQCB1	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3336059451103	2	545.33135	1088.64815	2.5407	0.0013855	0.31635	0.00017252	2.857	0.001558	545.33148858068	75.085	0.31616	75.409	75.237	75.553	0.32464					17	9	2	0	0	0	0.15456	2	31430	31375;31430		38.176	13.502	1	1257900			10954	4274	5450	5472	13271;13272	13272					0.10736943831057033
ILDEVIFKL	9	Unmodified	_ILDEVIFKL_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF;nc|ENSG00000173226|Q15051-3|IQCB1;IQCB1|p.E529Sfs*18|1|0.05|ENSG00000173226|chr3:121770557-121770558|-/AGCCTCCTGAGTAGCTGGGA|frameshift_variant;ENSG00000173226|ENST00000310864|IQCB1	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3330566287041	2	545.33135	1088.64815	3.3308	0.0018164	1.8782	0.0010242	5.209	0.0028406	545.3312879636239	74.021	0.40617	75.339	75.154	75.561	1.318					21	12	3	0	0	0	0.075994	1	31050	31050		57.722	1.5449	1	3422000			10955	4274	5450	5472	13273	13273					0.10736943831057033
ILDEVIFKL	9	Unmodified	_ILDEVIFKL_					0	0	0		ENST00000401788.2_1_6:27978946-27979378:+|nuORF;nc|ENSG00000173226|Q15051-3|IQCB1;IQCB1|p.E529Sfs*18|1|0.05|ENSG00000173226|chr3:121770557-121770558|-/AGCCTCCTGAGTAGCTGGGA|frameshift_variant;ENSG00000173226|ENST00000310864|IQCB1	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	ENST00000401788.2_1_6:27978946-27979378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3329955935478	2	545.33135	1088.64815	2.7409	0.0014947	-0.2954	-0.00016109	2.4455	0.0013336	545.3314578063499	73.467	0.33994	75.263	75.1	75.44	1.7962					20	10	3	0	0	0	0.053939	1	30843	30843		66.457	20.757	1	2271700			10956	4274	5450	5472	13274	13274					0.10736943831057033
ILDKKVEKV	9	Unmodified	_ILDKKVEKV_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	357.8975097537041	3	357.897258	1070.66995	-2.2214	-0.00079503	2.5338	0.00090685	0.31244	0.00011182	357.8980615903106	13.068	0.21667	13.068	12.96	13.177	0					15	6	3	0	0	0	0.060242	1	5407	5407		51.488	16.556	1	2416200			10957	1194;7944	5451	5473	13275	13275					0.1374374857962266
ILDKKVEKV	9	Unmodified	_ILDKKVEKV_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	357.897258	1070.66995	-0.08997	-3.22E-05	0.66297	0.00023728	0.573	0.00020508	357.8975208296575	12.76	0.18213	12.849	12.74	12.922	0.089381	-0.12847	-0.00016036	NaN	51.488	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3325500			10958	1194;7944	5451	5473							0.1374374857962266
ILDKKVEKV	9	Unmodified	_ILDKKVEKV_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	357.897258	1070.66995	-1.4391	-0.00051505	1.5331	0.00054868	0.093963	3.3629E-05	357.89776178385034	12.364	0.24736	13.058	12.948	13.195	0.69396	0.080604	0.00077384	NaN	51.488	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5621100			10959	1194;7944	5451	5473							0.1374374857962266
ILDKKVEKV	9	Unmodified	_ILDKKVEKV_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	357.897258	1070.66995	-0.30688	-0.00010983	-0.016121	-5.7696E-06	-0.323	-0.0001156	357.8972692922043	12.147	0.15785	12.935	12.845	13.003	0.78751	-0.042392	-0.00088949	NaN	51.488	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5867500			10960	1194;7944	5451	5473							0.1374374857962266
ILDLIAHIQA	10	Unmodified	_ILDLIAHIQA_					0	0	0		tr|A0A7D6ZYH0|A0A7D6ZYH0_9CLOTUDP-N-acetylenolpyruvoylglucosaminereductaseOS=ClostridiumintestinaleOX=36845GN=murBPE=3SV=1	tr|A0A7D6ZYH0|A0A7D6ZYH0_9CLOTUDP-N-acetylenolpyruvoylglucosaminereductaseOS=ClostridiumintestinaleOX=36845GN=murBPE=3SV=1	tr|A0A7D6ZYH0|A0A7D6ZYH0_9CLOTUDP-N-acetylenolpyruvoylglucosaminereductaseOS=ClostridiumintestinaleOX=36845GN=murBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8323852419853	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.82019	2	29782	29782;29874		10.074	0.6908	1	5931400			10961	17197	5452	5474	13276;13277	13276					0.10094577919812764
ILDLVTIKGQQ	11	Unmodified	_ILDLVTIKGQQ_					0	0	0			REV__DUSP10|p.D316Afs*6|1|0.06|ENSG00000143507|chr1:221706331-221706332|-/G|frameshift_variant	REV__DUSP10|p.D316Afs*6|1|0.06|ENSG00000143507|chr1:221706331-221706332|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3701660037041	2	614.368995	1226.72344	1.2428	0.00076355	0.59244	0.00036398	1.8353	0.0011275	614.3694053212108	69.544	0.40899	69.866	69.657	70.066	0.32224					44	12	4	0	0	0	0.70499	1	29094	29094		18.146	1.0335	1	12999000	+		10962	8463	5453	5475	13278	13278					0.11914501291494162
ILDLVTIKGQQ	11	Unmodified	_ILDLVTIKGQQ_					0	0	0			REV__DUSP10|p.D316Afs*6|1|0.06|ENSG00000143507|chr1:221706331-221706332|-/G|frameshift_variant	REV__DUSP10|p.D316Afs*6|1|0.06|ENSG00000143507|chr1:221706331-221706332|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3707153201103	2	614.368995	1226.72344	2.1823	0.0013408	-0.39674	-0.00024375	1.7856	0.001097	614.3687494008938	68.003	0.46201	69.873	69.643	70.105	1.87					51	14	5	0	0	0	0.70499	1	28574	28574		18.146	1.9972	1	22270000	+		10963	8463	5453	5475	13279	13279					0.11914501291494162
ILDPAEPTGDV	11	Unmodified	_ILDPAEPTGDV_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.7863036990166	2	563.784961	1125.55537	1.5828	0.00089233	-0.38768	-0.00021857	1.1951	0.00067376	563.7852310293723	51.881	0.37538	51.881	51.693	52.069	0					25	11	3	0	0	0	0.74096	1	21601	21601		17.113	1.2657	1	1480300			10964	1736	5454	5476	13280	13280					-0.002386056929935876
ILDPAEPTGDV	11	Unmodified	_ILDPAEPTGDV_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.7861205935478	2	563.784961	1125.55537	1.6236	0.00091534	0.69233	0.00039033	2.3159	0.0013057	563.785465864575	51.394	0.34109	51.719	51.539	51.88	0.32553					22	10	3	0	0	0	0.54522	2	21546	21494;21546		22.736	0	1	2010400			10965	1736	5454	5476	13281;13282	13282					-0.002386056929935876
ILDPAEPTGDV	11	Unmodified	_ILDPAEPTGDV_					0	0	0		ENSG00000111335|ENST00000392583|OAS2;nc|ENSG00000111335|P29728|OAS2	ENSG00000111335|ENST00000392583|OAS2	ENSG00000111335|ENST00000392583|OAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.1940185427666	3	376.1924	1125.55537	1.4037	0.00052804	2.0208	0.00076019	3.4244	0.0012882	376.19361981294077	49.623	0.40781	51.601	51.443	51.851	1.9772					19	12	2	0	0	0	0.96769	1	20817	20817		2.6312	0.19645	1	1062600			10966	1736	5454	5476	13283	13283					-0.002386056929935876
ILDPDYQMI	9	Unmodified	_ILDPDYQMI_					0	0	0			REV__tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	REV__tr|A0A7D6W1E3|A0A7D6W1E3_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03535PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7750121951103	2	554.273175	1106.5318	4.0531	0.0022465	-2.1385	-0.0011853	1.9146	0.0010612	554.2720071808649	91.49	0.43282	92.461	92.28	92.712	0.97109					26	13	3	0	0	0	0.37357	1	38591	38591		21.747	3.6117	1	767870	+		10967	15590	5455	5477	13284	13284					-0.017207427311632273
ILDPHVVLL	9	Unmodified	_ILDPHVVLL_					0	0	0		ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENSG00000108559|ENST00000573584|NUP88	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8198119997978	2	509.81841	1017.62227	2.0552	0.0010478	0.9904	0.00050493	3.0456	0.0015527	509.818824341879	65.264	0.34421	65.264	65.072	65.416	0					22	10	3	0	0	0	0.059546	2	27209	27162;27209		64.236	21.005	1	3417300			10968	1639	5456	5478	13285;13286	13286					0.11416094379421793
ILDPHVVLL	9	Unmodified	_ILDPHVVLL_					0	0	0		ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENSG00000108559|ENST00000573584|NUP88	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8199645876884	2	509.81841	1017.62227	2.0929	0.001067	1.4523	0.00074041	3.5452	0.0018074	509.8191514149778	64.727	0.31049	65.053	64.852	65.162	0.32689					22	9	3	0	0	0	0.059546	2	27078	27078;27128		64.236	18.486	1	5191000			10969	1639	5456	5478	13287;13288	13287					0.11416094379421793
ILDPHVVLL	9	Unmodified	_ILDPHVVLL_					0	0	0		ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENSG00000108559|ENST00000573584|NUP88	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8206359744072	2	509.81841	1017.62227	2.8021	0.0014285	0.23749	0.00012108	3.0396	0.0015496	509.81865682616484	63.447	0.39901	64.86	64.626	65.025	1.4134					42	12	4	0	0	0	0.042029	3	26564	26564;26612;26672		74.423	38.296	1	10998000			10970	1639	5456	5478	13289;13290;13291	13289					0.11416094379421793
ILDPHVVLL	9	Unmodified	_ILDPHVVLL_					0	0	0		ENST00000574867.5_1_17:5292093-5322970:-|nuORF;ENSG00000108559|ENST00000573584|NUP88	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	ENST00000574867.5_1_17:5292093-5322970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8214599490166	2	509.81841	1017.62227	2.6557	0.0013539	-0.13087	-6.6718E-05	2.5249	0.0012872	509.8184800547257	62.905	0.40034	64.85	64.597	64.997	1.9444					40	12	4	0	0	0	0.059546	3	26343	26343;26390;26449		64.236	19.829	1	10779000			10971	1639	5456	5478	13292;13293;13294	13292					0.11416094379421793
ILDPISSGFLL	11	Unmodified	_ILDPISSGFLL_					0	0	0		ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8406249880791	2	587.839539	1173.66453	4.1133	0.002418	-1.6815	-0.00098843	2.4319	0.0014295	587.8385836040308	94.923	0.33692	95.664	95.487	95.824	0.74124					29	11	3	0	0	0	0.035291	1	39955	39955		103.35	61.259	1	2647200			10972	3628	5457	5479	13295	13295					0.08464024997169872
ILDPISSGFLL	11	Unmodified	_ILDPISSGFLL_					0	0	0		ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	ENSG00000162598|ENST00000371201|C1orf87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8420287966728	2	587.839539	1173.66453	3.2526	0.001912	-1.3758	-0.00080875	1.8768	0.0011033	587.8390109162066	94.561	0.43085	95.75	95.464	95.895	1.1887					29	13	3	0	0	0	0.18339	1	39785	39785		60.074	23.608	1	2002200			10973	3628	5457	5479	13296	13296					0.08464024997169872
ILDPVSTGTL	10	Unmodified	_ILDPVSTGTL_					0	0	0			REV__nc|ENSG00000121904|Q7Z408-3|CSMD2	REV__nc|ENSG00000121904|Q7Z408-3|CSMD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2892333865166	2	508.28714	1014.55973	2.3199	0.0011792	0.5213	0.00026497	2.8412	0.0014441	508.28735477573747	69.064	0.45769	70.429	70.187	70.645	1.3657					35	14	4	0	0	0	0.846	1	28949	28949		7.2892	0.56607	1	5497400	+		10974	9598	5458	5480	13297	13297					0.053029035205895525
ILDQFLNRRKR	11	Unmodified	_ILDQFLNRRKR_					0	0	0			REV__ENST00000254742.6_1_4:4247980-4248055:-|nuORF	REV__ENST00000254742.6_1_4:4247980-4248055:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.7866088747978	3	486.959915	1457.85791	2.333	0.0011361	-0.60747	-0.00029582	1.7255	0.00084026	486.960021303433	84.933	0.42551	86.092	85.964	86.389	1.159					20	13	2	0	0	0	0.14606	1	35628	35628		0.50596	0	1	741120	+		10975	12154	5459	5481	13298	13298					0.14729999556698203
ILDQKINEV	9	Unmodified	_ILDQKINEV_					0	0	0		ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF	ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3060180544853	2	536.305864	1070.59717	1.2516	0.00067123	-0.5415	-0.00029041	0.71008	0.00038082	536.3058522710071	27.236	0.24267	28.507	28.345	28.587	1.2715					17	7	3	0	0	0	0.075994	1	11385	11385		57.722	15.882	1	2629000			10976	1933	5460	5482	13299	13299					0.06469994786175448
ILDQKINEV	9	Unmodified	_ILDQKINEV_					0	0	0		ENSG00000115758|ENST00000234111|ODC1;ENST00000446285.5_1_2:10584646-10585158:-|nuORF	ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3057739138603	2	536.305864	1070.59717	0.86108	0.0004618	-1.638	-0.00087849	-0.77695	-0.00041668	536.3052406174678	26.703	0.24988	28.45	28.337	28.587	1.747					18	8	3	0	0	0	0.040497	1	11184	11184		75.761	20.987	1	2505100			10977	1933	5460	5482	13300	13300					0.06469994786175448
ILDVSVKTV	9	Unmodified	_ILDVSVKTV_					0	0	0		ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2994567751884	2	487.30005	972.585547	1.8173	0.00088555	-3.3054	-0.0016107	-1.4881	-0.00072516	487.2983357474816	74.98	0.40849	74.98	74.745	75.154	0					29	12	3	0	0	0	0.76456	1	31262	31262		4.756	0.42677	1	5555700			10978	4315	5461	5483	13301	13301					0.09815797762860257
ILDVSVKTV	9	Unmodified	_ILDVSVKTV_					0	0	0		ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	487.30005	972.585547	1.8173	0.00088555	-3.3054	-0.0016107	-1.4881	-0.00072516	487.2983357474816	74.98	0.40849	74.98	74.745	75.154	0	-0.167	0.0003697	NaN	4.756	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5555700			10979	4315	5461	5483							0.09815797762860257
ILDVSVKTV	9	Unmodified	_ILDVSVKTV_					0	0	0		ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	487.30005	972.585547	3.3489	0.0016319	-3.8025	-0.001853	-0.45355	-0.00022101	487.29811007822514	74.744	0.46406	75.069	74.833	75.297	0.32464	-0.078157	-0.00011479	NaN	4.756	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6591900			10980	4315	5461	5483							0.09815797762860257
ILDVSVKTV	9	Unmodified	_ILDVSVKTV_					0	0	0		ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	487.30005	972.585547	3.581	0.001745	-3.7794	-0.0018417	-0.19843	-9.6696E-05	487.298113416845	73.863	0.59442	75.181	74.966	75.561	1.318	0.033616	-9.2272E-05	NaN	4.756	35	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3447200			10981	4315	5461	5483							0.09815797762860257
ILDVSVKTV	9	Unmodified	_ILDVSVKTV_					0	0	0		ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	ENSG00000174125|ENST00000308979|TLR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	487.30005	972.585547	2.7508	0.0013405	-3.8338	-0.0018682	-1.083	-0.00052773	487.29826686307035	73.562	0.43586	75.359	75.1	75.536	1.7962	0.21154	-0.00014528	NaN	4.756	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2903700			10982	4315	5461	5483							0.09815797762860257
ILDVWHLP	8	Unmodified	_ILDVWHLP_					0	0	0		ENST00000579456.5_1_17:57759990-57760286:+|nuORF	ENST00000579456.5_1_17:57759990-57760286:+|nuORF	ENST00000579456.5_1_17:57759990-57760286:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.3067199587822	2	496.781828	991.549102	2.736	0.0013592	1.4282	0.0007095	4.1642	0.0020687	496.7831526229583	79.396	0.37497	80.654	80.462	80.837	1.2575					17	11	2	0	0	0	2.3239	1	33300	33300		32.117	10.37	1	1195800			10983	7428	5462	5484	13302	13302					0.05298965656788823
ILEAPIVALG	10	Unmodified	_ILEAPIVALG_					0	0	0			REV__tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	REV__tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	332.5439636111259	3	332.542704	994.606283	0.73069	0.00024299	2.592	0.00086196	3.3227	0.0011049	332.54370305531717	46.797	0.47789	48.179	47.964	48.442	1.3825					33	14	3	0	0	0	0.89803	1	19614	19614		0.69767	0	1	1466200	+		10984	15834	5463	5485	13303	13303					0.10876388142526139
ILEDKSTNTYE	11	Unmodified	_ILEDKSTNTYE_					0	0	0		tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2148315310478	3	438.213752	1311.61943	1.4943	0.00065481	-1.1209	-0.00049121	0.37334	0.0001636	438.21329771017844	53.169	0.3577	53.169	52.981	53.339	0					25	13	2	0	0	0	0.9945	1	22220	22220		4.1166	0.52957	1	2071100			10985	16934	5464	5486	13304	13304					-0.023918703267099772
ILEDKSTNTYE	11	Unmodified	_ILEDKSTNTYE_					0	0	0		tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	tr|A0A7D6VTX2|A0A7D6VTX2_9CLOTYdcFfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2149230837822	3	438.213752	1311.61943	2.1562	0.00094489	-2.9131	-0.0012766	-0.75689	-0.00033168	438.2128383471602	52.64	0.33318	52.962	52.742	53.076	0.32283					27	11	3	0	0	0	0.95289	1	22010	22010		6.6235	2.2173	1	4410500			10986	16934	5464	5486	13305	13305					-0.023918703267099772
ILEDNEDFI	9	Unmodified	_ILEDNEDFI_					0	0	0			REV__nc|ENSG00000174844|Q6ZR08|DNAH12	REV__nc|ENSG00000174844|Q6ZR08|DNAH12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2628051638603	2	554.263862	1106.51317	1.6834	0.00093306	-3.0997	-0.0017181	-1.4163	-0.00078501	554.2615671695502	67.634	0.37461	69.504	69.268	69.643	1.87					17	11	2	0	0	0	0.64949	1	28387	28387		9.3474	0.75416	1	2197400	+		10987	11136	5465	5487	13306	13306					-0.03582581101386495
ILEHYVVL	8	Unmodified	_ILEHYVVL_					0	0	0			REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2898132205009	2	493.289485	984.564418	2.7642	0.0013635	-0.53226	-0.00026256	2.2319	0.001101	493.28882707282816	78.709	1.1236	79.976	79.787	80.91	1.2668					70	35	4	0	0	0	0.7528	1	33012	33012		32.117	32.117	1	7014800	+		10988	10254	5466	5488	13307	13307					0.07151832453996576
ILEHYVVL	8	Unmodified	_ILEHYVVL_					0	0	0			REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	REV__ENST00000481925.1_1_2:220045424-220045941:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2904540896416	2	493.289485	984.564418	2.282	0.0011257	0.65675	0.00032397	2.9388	0.0014497	493.289722329038	78.769	0.46412	80.504	80.319	80.784	1.735					27	14	2	0	0	0	0.67986	1	33066	33066		40.449	8.1431	1	2205300	+		10989	10254	5466	5488	13308	13308					0.07151832453996576
ILEKGDHII	9	Unmodified	_ILEKGDHII_					0	0	0		tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.3526489138603	2	519.303124	1036.5917	2.0785	0.0010794	0.39936	0.00020739	2.4779	0.0012868	519.3033903526361	76.026	0.40691	76.026	75.82	76.226	0					33	12	4	0	0	0	0.097511	1	31726	31726		23.148	2.6948	1	11543000			10990	17076	5467	5489	13309	13309					0.07486315994378856
ILEKGDHII	9	Unmodified	_ILEKGDHII_					0	0	0		tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	tr|A0A7D6ZGX0|A0A7D6ZGX0_9CLOTcysteinedesulfuraseOS=ClostridiumintestinaleOX=36845GN=HZF06_00440PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.3530151247978	2	519.303124	1036.5917	2.5827	0.0013412	0.13098	6.8017E-05	2.7137	0.0014092	519.3031879251555	75.589	0.37025	75.91	75.742	76.112	0.32163					37	11	4	0	0	0	0.097511	1	31588	31588		23.148	2.6948	1	13562000			10991	17076	5467	5489	13310	13310					0.07486315994378856
ILEKPQTPSTV	11	Unmodified	_ILEKPQTPSTV_					0	0	0		ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2105590701103	2	606.845353	1211.67615	2.4348	0.0014775	2.9061	0.0017635	5.3408	0.0032411	606.8464126352151	82.139	0.1777	82.139	81.977	82.154	0					6	5	2	0	0	0	0.14606	1	34206	34206		6.2058	2.2614	1	503070			10992	5501	5468	5490	13311	13311					0.07878222020463
ILEKPQTPSTV	11	Unmodified	_ILEKPQTPSTV_					0	0	0		ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	606.845353	1211.67615	2.7073	0.0016429	4.7053	0.0028554	7.4126	0.0044983	606.8471551991935	80.671	0.26997	81.904	81.8	82.07	1.2332	-0.089364	0.0014777	NaN	6.2058	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	696460			10993	5501	5468	5490							0.07878222020463
ILEKPQTPSTV	11	Unmodified	_ILEKPQTPSTV_					0	0	0		ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	ENST00000155926.8_1_2:12857740-12857812:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	606.845353	1211.67615	1.1737	0.00071225	2.7975	0.0016976	3.9712	0.0024099	607.349330080766	80.22	0.26387	81.937	81.848	82.111	1.7167	-0.056477	-0.00083774	NaN	6.2058	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1070500			10994	5501	5468	5490							0.07878222020463
ILELKIAGV	9	Unmodified	_ILELKIAGV_					0	0	0			REV__PLEKHG1|p.R975Sfs*13|1|0.31|ENSG00000120278|chr6:150832032-150832053|GCAGGGTGTTTATGATGGCTCG/-|frameshift_variant	REV__PLEKHG1|p.R975Sfs*13|1|0.31|ENSG00000120278|chr6:150832032-150832053|GCAGGGTGTTTATGATGGCTCG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	955.6182739138603	1	955.618645	954.611368	3.4258	0.0032738	-2.6055	-0.0024899	0.82028	0.00078388	955.6160391120237	107.66	0.20434	107.82	107.68	107.88	0.15795					32	10	4	0	0	0	0.84963	1	46348	46348		0.6015	0	1	649990000	+		10995	9568	5469	5491	13312	13312					0.13224692005121597
ILENPPEEMKL	11	Unmodified	_ILENPPEEMKL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;EIF4G3|p.V1177Cfs*16|1|0.06|ENSG00000075151|chr1:20851333-20851334|-/A|frameshift_variant	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8481933474541	2	656.844496	1311.67444	1.8489	0.0012144	-0.46689	-0.00030667	1.382	0.00090774	656.844177060627	43.816	0.33728	45.169	44.947	45.284	1.3536					18	10	2	0	0	0	0.56706	1	18347	18347		27.223	6.8087	1	938310			10996	924	5470	5492	13313	13313					0.031068449401800535
ILENPPEEMKL	11	Unmodified	_ILENPPEEMKL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-2|EIF4G3;EIF4G3|p.V1177Cfs*16|1|0.06|ENSG00000075151|chr1:20851333-20851334|-/A|frameshift_variant	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8453857302666	2	656.844496	1311.67444	1.9187	0.0012603	0.50337	0.00033063	2.4221	0.0015909	656.8436986496457	43.194	0.27285	45.137	44.952	45.225	1.9438					15	8	2	0	0	0	0.65386	1	18123	18123		29.437	15.531	1	988300			10997	924	5470	5492	13314	13314					0.031068449401800535
ILEPSLYTV	9	Unmodified	_ILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1034.578295886517	1	1034.57684	1033.56956	2.2238	0.0023007	-0.68368	-0.00070732	1.5401	0.0015933	1034.576894154055	61.931	0.31672	63.349	63.176	63.492	1.4177					17	9	2	0	0	0	0.0075027	1	25968	25968		112.59	45.249	1	1169800			10998	1739	5471	5493	13315	13315					0.05412091525931828
ILEPSLYTV	9	Unmodified	_ILEPSLYTV_					0	0	0		ENST00000551412.5_1_12:54718935-54741629:+|nuORF;nc|ENSG00000111481|P61923-5|COPZ1;ENSG00000111481|ENST00000262061|COPZ1;ENST00000553009.5_1_12:54718935-54736154:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	ENST00000551412.5_1_12:54718935-54741629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1034.582324206829	1	1034.57684	1033.56956	2.9524	0.0030545	0.67399	0.00069729	3.6264	0.0037518	1034.5770060287123	61.405	0.32068	63.362	63.209	63.53	1.9571					12	9	2	0	0	0	0.059546	1	25759	25759		64.236	24.279	1	1064800			10999	1739	5471	5493	13316	13316					0.05412091525931828
ILETGQVAL	9	Unmodified	_ILETGQVAL_					0	0	0			REV__ENST00000338447.10_1_11:63706445-63713674:+|nuORF	REV__ENST00000338447.10_1_11:63706445-63713674:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7704650759697	2	472.276575	942.538597	3.4095	0.0016102	-2.643	-0.0012482	0.76654	0.00036202	472.27648490525877	60.748	0.53941	62.168	61.933	62.473	1.4196					33	16	3	0	0	0	0.28226	1	25536	25536		26.341	1.6674	1	5058900	+		11000	12480	5472	5494	13317	13317					0.06502938211713172
ILEVCGUKL	9	Unmodified	_ILEVCGUKL_					0	0	0		nc|ENSG00000183291|O60613-2|SELENOF;ENSG00000183291|ENST00000331835|SELENOF	nc|ENSG00000183291|O60613-2|SELENOF	nc|ENSG00000183291|O60613-2|SELENOF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2329589724541	2	513.233782	1024.45301	3.7069	0.0019025	-4.0811	-0.0020945	-0.37417	-0.00019204	513.2310572770258	82.281	0.34683	83.952	83.734	84.081	1.67					26	10	4	0	0	0	0.68551	1	34480	34480		0	0	0	968120			11001	4646	5473	5495	13318	13318					-0.05823793800539079
ILFDPKTSV	9	Unmodified	_ILFDPKTSV_					0	0	0		nc|ENSG00000115295|Q8N3C7-3|CLIP4;nc|ENSG00000115295|Q8N3C7-2|CLIP4;ENSG00000115295|ENST00000320081|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	nc|ENSG00000115295|Q8N3C7-3|CLIP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2928954958916	2	510.292225	1018.5699	2.1048	0.0010741	1.4273	0.00072832	3.5321	0.0018024	510.2931063194906	44.888	0.40419	44.888	44.687	45.091	0					18	12	2	0	0	0	0.49082	1	18805	18805		15.847	4.7327	1	626460			11002	1911	5474	5496	13319	13319					0.06135511245804537
ILFGLIKDV	9	Unmodified	_ILFGLIKDV_					0	0	0		DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant;DHX16|p.E919Rfs*60|1|0.09|ENSG00000204560|chr6:30655243-30655244|-/G|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3228942751884	2	509.320786	1016.62702	2.0828	0.0010608	0.76125	0.00038772	2.844	0.0014485	509.32120743684067	74.844	0.34384	74.844	74.683	75.027	0					18	10	2	0	0	0	0.24056	1	31160	31160		28.495	4.4739	1	822740			11003	406	5475	5497	13320	13320					0.11936978522169284
ILFGLIKDV	9	Unmodified	_ILFGLIKDV_					0	0	0		DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant;DHX16|p.E919Rfs*60|1|0.09|ENSG00000204560|chr6:30655243-30655244|-/G|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3221313357353	2	509.320786	1016.62702	2.7457	0.0013984	-1.8761	-0.00095556	0.86951	0.00044286	509.32043071501465	74.281	0.41121	74.606	74.359	74.77	0.32464					24	12	3	0	0	0	0.35391	2	31049	31049;31101		22.736	2.2827	1	899720			11004	406	5475	5497	13321;13322	13321					0.11936978522169284
ILFGLIKDV	9	Unmodified	_ILFGLIKDV_					0	0	0		DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant;DHX16|p.E919Rfs*60|1|0.09|ENSG00000204560|chr6:30655243-30655244|-/G|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3228027224541	2	509.320786	1016.62702	3.8505	0.0019611	-0.13404	-6.8271E-05	3.7165	0.0018929	509.3207076456137	73.192	0.50271	74.522	74.288	74.791	1.3297					45	15	4	0	0	0	0.036104	3	30721	30676;30721;30765		79.596	3.9816	1	5071300			11005	406	5475	5497	13323;13324;13325	13324					0.11936978522169284
ILFGLIKDV	9	Unmodified	_ILFGLIKDV_					0	0	0		DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant;DHX16|p.E919Rfs*60|1|0.09|ENSG00000204560|chr6:30655243-30655244|-/G|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3220397830009	2	509.320786	1016.62702	2.8924	0.0014732	-0.045246	-2.3045E-05	2.8471	0.0014501	509.32071210628925	72.601	0.56772	74.411	74.229	74.797	1.8101					40	17	3	0	0	0	0.046715	2	30449	30449;30500		70.332	11.701	1	4477900			11006	406	5475	5497	13326;13327	13326					0.11936978522169284
ILFGMGNPLL	10	Unmodified	_ILFGMGNPLL_					0	0	0		VCL-ADK|9|fusion;VCL-ADK|11|fusion;nc|ENSG00000156110|P55263-4|ADK;nc|ENSG00000156110|P55263-2|ADK;ENSG00000156110|ENST00000539909|ADK;VCL-ADK|10|fusion;nc|ENSG00000156110|P55263-3|ADK	VCL-ADK|9|fusion	VCL-ADK|9|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3026611208916	2	537.804445	1073.59434	4.3746	0.0023527	-3.1249	-0.0016806	1.2497	0.00067211	537.8053335337221	89.965	0.47047	91.37	91.113	91.583	1.4045					34	14	4	0	0	0	0.45153	2	37912	37857;37912		30.225	9.7712	1	1477400			11007	17353	5476	5498	13328;13329	13329					0.06048448127694428
ILFIIFSRRFF	11	Unmodified	_ILFIIFSRRFF_					0	0	0			REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|118|1|anti-sense	REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|118|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	487.7844116091728	3	486.958852	1457.85473	3.3077	0.0016107	-0.94068	-0.00045807	2.3671	0.0011527	486.9585480425516	85.8	0.49635	86.053	85.726	86.222	0.25227					29	15	2	0	0	0	0.14606	1	35755	35755		1.4551	0.94916	1	611430	+		11008	14177	5477	5499	13330	13330					0.14411356450000312
ILFKSIFEV	9	Unmodified	_ILFKSIFEV_					0	0	0		ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	548.3271362185478	2	548.326068	1094.63758	1.5339	0.00084109	-0.25809	-0.00014152	1.2758	0.00069957	548.326088540949	75.547	0.44465	75.547	75.342	75.787	0					31	13	3	0	0	0	0.026734	1	31470	31470		92.653	42.72	1	2489000			11009	3332	5478	5500	13331	13331					0.09404961176619508
ILFKSIFEV	9	Unmodified	_ILFKSIFEV_					0	0	0		ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	548.3275024294853	2	548.326068	1094.63758	2.55	0.0013982	-0.024285	-1.3316E-05	2.5257	0.0013849	548.3263265846853	74.947	0.47134	75.272	75.082	75.553	0.32464					28	14	3	0	0	0	0.071837	1	31370	31370		59.368	19.129	1	2647700			11010	3332	5478	5500	13332	13332					0.09404961176619508
ILFKSIFEV	9	Unmodified	_ILFKSIFEV_					0	0	0		ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3273803591728	2	548.326068	1094.63758	3.2546	0.0017846	-0.73512	-0.00040308	2.5194	0.0013815	548.3257603598909	73.856	0.59554	75.174	74.935	75.53	1.318					49	18	4	0	0	0	0.0070725	2	31010	30957;31010		114.2	46.121	1	7691100			11011	3332	5478	5500	13333;13334	13334					0.09404961176619508
ILFKSIFEV	9	Unmodified	_ILFKSIFEV_					0	0	0		ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	ENSG00000152661|ENST00000282561|GJA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3273803591728	2	548.326068	1094.63758	2.5876	0.0014188	-0.63632	-0.00034891	1.9513	0.0010699	548.3258406888549	73.314	0.56142	75.124	74.893	75.454	1.8101					44	17	4	0	0	0	0.0070725	2	30725	30725;30777		114.2	41.234	1	6515500			11012	3332	5478	5500	13335;13336	13335					0.09404961176619508
ILFRLFRN	8	Unmodified	_ILFRLFRN_					0	0	0			REV__tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	REV__tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2219726443291	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.572	1	19.551	19.051	20.051	0.97922								0	0	0	1.0178	1	7736	7736		0.40072	0	1		+		11013	15342	5479	5501	13337	13337					0.10901738567713437
ILFRLFRN	8	Unmodified	_ILFRLFRN_					0	0	0			REV__tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	REV__tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2222473025322	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.663	1	19.642	19.142	20.142	0.97922								0	0	0	1.0178	1	7775	7775		0.40072	0	1		+		11014	15342	5479	5501	13338	13338					0.10901738567713437
ILFVMKPV	8	Unmodified	_ILFVMKPV_					0	0	0			REV__sp|P16750|GO_HCMVAGlycoproteinOOS=Humancytomegalovirus(strainAD169)OX=10360GN=GOPE=1SV=1	REV__sp|P16750|GO_HCMVAGlycoproteinOOS=Humancytomegalovirus(strainAD169)OX=10360GN=GOPE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.7942077517509	2	473.793349	945.572146	2.1736	0.0010299	-0.28889	-0.00013687	1.8847	0.00089298	473.79322250077485	71	0.60351	71	70.78	71.383	0					29	18	2	0	0	0	0.88958	1	29547	29547		2.8892	2.8892	1	1320700	+		11015	14655	5480	5502	13339	13339					0.09718268449921652
ILGAMPLYKFI	11	Unmodified	_ILGAMPLYKFI_					0	0	0			REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3705932497978	2	633.369952	1264.72535	2.4138	0.0015288	-1.1635	-0.0007369	1.2504	0.00079194	633.3690434173299	80.495	1.7494	81.746	80.955	82.705	1.2512					154	56	5	0	0	0	1.0031	1	34017	34017		3.5965	0	1	8479200	+		11016	15252	5481	5503	13340	13340					0.1035783877571248
ILGAMPLYKFI	11	Unmodified	_ILGAMPLYKFI_					0	0	0			REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3713256716728	2	633.369952	1264.72535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.944	1	79.696	79.196	80.196	1.7514								0	0	0	0.63775	1	32690	32690		3.5965	1.7523	1		+		11017	15252	5481	5503	13341	13341					0.1035783877571248
ILGAMPLYKFI	11	Unmodified	_ILGAMPLYKFI_					0	0	0			REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	REV__tr|A0A553STQ3|A0A553STQ3_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05435PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3705932497978	2	633.369952	1264.72535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.095	1	79.846	79.346	80.346	1.7514								0	0	0	0.63775	1	32753	32753		3.5965	0	1		+		11018	15252	5481	5503	13342	13342					0.1035783877571248
ILGDFNLLYEG	11	Unmodified	_ILGDFNLLYEG_					0	0	0			REV__tr|A0A553SMG4|A0A553SMG4_NIACIGlycosidehydrolasefamily105proteinOS=NialliacirculansOX=1397GN=CEQ21_22505PE=4SV=1	REV__tr|A0A553SMG4|A0A553SMG4_NIACIGlycosidehydrolasefamily105proteinOS=NialliacirculansOX=1397GN=CEQ21_22505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	627.3256713747978	2	627.324254	1252.63395	2.1486	0.0013478	0.72944	0.0004576	2.878	0.0018054	627.324443551855	94.009	0.37481	94.009	93.837	94.212	0					29	11	3	0	0	0	0.80586	1	39268	39268		15.248	1.3424	1	5823500	+		11019	15017	5482	5504	13343	13343					0.017742466120807876
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	952.6109496951103	1	952.607746	951.600469	1.7442	0.0016616	1.8789	0.0017898	3.6231	0.0034514	952.6099760093658	94.398	0.46016	94.398	94.119	94.579	0					35	14	3	0	0	0	0.11478	2	39462	39409;39462		44.407	2.3125	1	2662200	+		11020	14844	5483	5505	13344;13345	13345					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1995117068291	2	476.807511	951.600469	2.2037	0.0010507	0.28524	0.000136	2.4889	0.0011867	476.8076434331054	94.41	0.36713	94.41	94.18	94.547	0					21	11	2	0	0	0	0.11333	1	39420	39420		8.5933	0	1	1795800	+		11021	14844	5483	5505	13346	13346					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	952.6078369021416	1	952.607746	951.600469	2.7108	0.0025823	1.6454	0.0015674	4.3562	0.0041497	952.610004032513	93.932	0.50945	94.077	93.815	94.325	0.14493					31	15	3	0	0	0	0.11478	3	39288	39288;39337;39377		44.407	2.3125	1	2782200	+		11022	14844	5483	5505	13347;13348;13349	13347					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	952.6106445193291	1	952.607746	951.600469	3.4827	0.0033176	1.5521	0.0014786	5.0348	0.0047962	952.6087566017427	93.116	0.48895	93.988	93.769	94.258	0.87176					34	14	3	0	0	0	0.11478	2	39144	39144;39259		44.407	1.738	1	4913300	+		11023	14844	5483	5505	13350;13351	13350					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2001830935478	2	476.807511	951.600469	4.299	0.0020498	0.071492	3.4088E-05	4.3705	0.0020839	476.80738811537844	93.185	0.52189	94.056	93.736	94.258	0.87176					38	15	3	0	0	0	0.090248	1	39261	39261		4.756	0	1	2471700	+		11024	14844	5483	5505	13352	13352					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	952.6083251833916	1	952.607746	951.600469	3.4882	0.0033229	1.2891	0.001228	4.7773	0.0045509	952.6089973836741	92.614	0.48181	93.941	93.765	94.247	1.3269					33	14	3	0	0	0	0.087207	3	38960	38960;39007;39048		53.576	2.7205	1	5241300	+		11025	14844	5483	5505	13353;13354;13355	13353					0.12273289630854833
ILGDLIPIV	9	Unmodified	_ILGDLIPIV_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2005493044853	2	476.807511	951.600469	3.3603	0.0016022	0.34601	0.00016498	3.7063	0.0017672	476.80748304558244	92.659	0.45008	93.968	93.747	94.197	1.3088					35	13	3	0	0	0	0.090248	1	39042	39042		8.5933	0	1	2696800	+		11026	14844	5483	5505	13356	13356					0.12273289630854833
ILGFKDVTI	9	Unmodified	_ILGFKDVTI_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3044311404228	2	503.302593	1004.59063	2.6367	0.0013271	1.0677	0.00053738	3.7044	0.0018644	503.303058489459	59.604	0.51395	61.573	61.405	61.918	1.969					22	16	2	0	0	0	0.091139	1	25005	25005		52.268	2.3353	1	1893300	+		11027	10364	5484	5506	13357	13357					0.08852101625473097
ILGFKDVTI	9	Unmodified	_ILGFKDVTI_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	503.302593	1004.59063	2.6367	0.0013271	1.0677	0.00053738	3.7044	0.0018644	503.303058489459	59.604	0.51395	61.573	61.405	61.918	1.969	0.004903	-0.00044026	NaN	52.268	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1893300	+		11028	10364	5484	5506							0.08852101625473097
ILGGVFVV	8	Unmodified	_ILGGVFVV_					0	0	0		nc|ENSG00000122378|Q9BRX8-2|PRXL2A;ENSG00000122378|ENST00000606162|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	803.5070068240166	1	803.502552	802.495276	2.2094	0.0017752	0.62203	0.0004998	2.8314	0.002275	803.503031038558	76.485	0.28736	76.807	76.662	76.949	0.32163					14	8	2	0	0	0	0.67839	1	32000	32000		32.454	0	1	655960			11029	2156	5485	5507	13358	13358					0.08612793225097448
ILGGVFVV	8	Unmodified	_ILGGVFVV_					0	0	0		nc|ENSG00000122378|Q9BRX8-2|PRXL2A;ENSG00000122378|ENST00000606162|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	803.5048705935478	1	803.502552	802.495276	2.2679	0.0018223	-0.02354	-1.8914E-05	2.2444	0.0018034	803.5021783000496	75.334	0.33488	76.641	76.464	76.799	1.3063					18	10	2	0	0	0	0.5848	1	31588	31588		41.817	9.3636	1	1298300			11030	2156	5485	5507	13359	13359					0.08612793225097448
ILGGVFVV	8	Unmodified	_ILGGVFVV_					0	0	0		nc|ENSG00000122378|Q9BRX8-2|PRXL2A;ENSG00000122378|ENST00000606162|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	nc|ENSG00000122378|Q9BRX8-2|PRXL2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	803.5054199099541	1	803.502552	802.495276	2.4764	0.0019898	-1.5174	-0.0012192	0.95899	0.00077055	803.5016985478279	74.842	0.28023	76.624	76.45	76.73	1.7817					13	8	2	0	0	0	0.5848	1	31417	31417		41.817	9.3636	1	1620700			11031	2156	5485	5507	13360	13360					0.08612793225097448
ILGIQPPSV	9	Unmodified	_ILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1461364626884	2	462.28166	922.548768	2.1854	0.0010103	0.29436	0.00013608	2.4798	0.0011463	462.28148042447623	64.204	0.47563	64.204	63.89	64.366	0					18	14	2	0	0	0	0.067699	1	26766	26766		30.225	3.8835	1	477790			11032	5212	5486	5508	13361	13361					0.08439545936948889
ILGIQPPSV	9	Unmodified	_ILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	462.2834350466728	2	462.28166	922.548768	3.1176	0.0014412	-0.092038	-4.2547E-05	3.0255	0.0013987	462.2814442618786	62.646	0.57847	64.059	63.583	64.162	1.4134					31	18	2	0	0	0	0.087207	1	26277	26277		53.576	13.127	1	2437000			11033	5212	5486	5508	13362	13362					0.08439545936948889
ILGIQPPSV	9	Unmodified	_ILGIQPPSV_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1476013064384	2	462.28166	922.548768	3.2452	0.0015002	-0.42943	-0.00019852	2.8158	0.0013017	462.2813272208854	62.081	0.67482	64.038	63.562	64.237	1.9571					34	21	2	0	0	0	0.047334	1	25978	25978		38.151	11.81	1	1163300			11034	5212	5486	5508	13363	13363					0.08439545936948889
ILGLGTSIG	9	Unmodified	_ILGLGTSIG_					0	0	0			REV__tr|A0A553SJM4|A0A553SJM4_NIACIMgtC/SapBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17130PE=3SV=1	REV__tr|A0A553SJM4|A0A553SJM4_NIACIMgtC/SapBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_17130PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	830.5005370974541	1	830.498195	829.490919	0.21251	0.00017649	2.5199	0.0020928	2.7324	0.0022692	830.5002785826207	55.049	0.23373	57.018	56.871	57.105	1.9684					12	7	2	0	0	0	0.069258	1	23108	23108		60.39	6.814	1	1354600	+		11035	14912	5487	5509	13364	13364					0.06935284011535714
ILGNRLAHRG	10	Unmodified	_ILGNRLAHRG_					0	0	0			REV__tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	REV__tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8306762576103	2	553.830706	1105.64686	1.2785	0.00070807	-0.43451	-0.00024064	0.84399	0.00046743	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.89803	1	30480	30480		1.6526	1.6526	1	6275300	+		11036	15265	5488	5510	13365	13365					0.09826167305504896
ILGPEKGQPL	10	Unmodified	_ILGPEKGQPL_					0	0	0			REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3134643435478	2	526.310949	1050.60735	3.3229	0.0017489	0.56156	0.00029556	3.8845	0.0020444	526.3110309801576	97.482	0.11983	97.788	97.715	97.835	0.3062					6	3	2	0	0	0	0.62746	1	41003	41003		21.747	1.293	1	18315000	+		11037	10533	5489	5511	13366	13366					0.08406602511445271
ILGPEKGQPL	10	Unmodified	_ILGPEKGQPL_					0	0	0			REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	526.310949	1050.60735	3.7267	0.0019614	0.49874	0.00026249	4.2254	0.0022239	526.3111003010896	97.583	0.11742	97.811	97.716	97.833	0.22776	0.011333	-4.1419E-05	NaN	21.747	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5826100	+		11038	10533	5489	5511							0.08406602511445271
ILGPEKGQPL	10	Unmodified	_ILGPEKGQPL_					0	0	0			REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.310949	1050.60735	3.3229	0.0017489	0.56156	0.00029556	3.8845	0.0020444	526.3110309801576	97.482	0.11983	97.788	97.715	97.835	0.3062	-0.011333	2.471E-05	NaN	21.747	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18315000	+		11039	10533	5489	5511							0.08406602511445271
ILGPPPPSF	9	Unmodified	_ILGPPPPSF_					0	0	0		ENSG00000015479|ENST00000394805|MATR3;MATR3-UBE2D2|2|fusion;MATR3-UBE2D2|6|fusion;nc|ENSG00000280987|P43243-2|MATR3;MATR3-UBE2D2|3|fusion;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;MATR3-UBE2D2|4|fusion;MATR3-UBE2D2|7|fusion;ENST00000511978.5_1_5:138651425-138655027:+|nuORF;ENST00000509918.5_1_5:138651425-138657594:+|nuORF;MATR3-UBE2D2|5|fusion	ENSG00000015479|ENST00000394805|MATR3	ENSG00000015479|ENST00000394805|MATR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	924.5215331912041	1	924.518931	923.511654	1.7623	0.0016293	0.44072	0.00040746	2.203	0.0020367	924.5189392926486	54.471	0.50634	55.876	55.676	56.182	1.4048					21	15	2	0	0	0	0.12174	1	22851	22851		42.095	5.6284	1	670170			11040	599	5490	5512	13367	13367					0.046838743911848724
ILGRPDRR	8	Unmodified	_ILGRPDRR_					0	0	0		ENST00000554406.1_1_14:23421645-23426142:-|nuORF;ENST00000553794.5_1_14:23417204-23426142:-|nuORF;ENST00000554373.5_1_14:23417204-23426142:-|nuORF	ENST00000554406.1_1_14:23421645-23426142:-|nuORF	ENST00000554406.1_1_14:23421645-23426142:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1941711306572	3	328.201675	981.583196	-2.2769	-0.00074729	-2.5238	-0.00082831	-4.8007	-0.0015756	328.2009171283455	33.87	1.2629	33.87	33.638	34.901	0					105	40	5	0	0	0	2.3239	1	14331	14331		1.1933	0	1	82373000			11041	7282	5491	5513	13368	13368					0.09166806868415733
ILGSKLDHKL	10	Unmodified	_ILGSKLDHKL_					0	0	0			REV__ENSG00000196455|ENST00000356763|PIK3R4	REV__ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3435546755791	2	562.345323	1122.67609	1.2972	0.0007295	-2.4132	-0.0013571	-1.116	-0.00062757	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.846	1	30150	30150		7.2892	1.0834	1	3980400	+		11042	11635	5492	5514	13369	13369					0.11966266811123205
ILGSKWSETL	10	Unmodified	_ILGSKWSETL_					0	0	0		ENSG00000168612|ENST00000372523|ZSWIM1	ENSG00000168612|ENST00000372523|ZSWIM1	ENSG00000168612|ENST00000372523|ZSWIM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	567.8018676638603	2	567.313689	1132.61282	2.6836	0.0015225	0.47005	0.00026666	3.1537	0.0017891	567.3140463798605	44.914	0.3482	46.279	46.149	46.497	1.3653					15	10	2	0	0	0	0.12519	1	18899	18899		3.9444	0.3479	1	1565400			11043	4045	5493	5515	13370	13370					0.051822813032458726
ILGTEDLIVEV	11	Unmodified	_ILGTEDLIVEV_					0	0	0		ENST00000558725.5_1_15:67519241-67546969:-|nuORF;ENSG00000103591|ENST00000261880|AAGAB	ENST00000558725.5_1_15:67519241-67546969:-|nuORF	ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8414794802666	2	600.839736	1199.66492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.612	1	79.364	78.864	79.864	1.7514								0	0	0	0.019413	1	32548	32548		56.177	21.775	1				11044	7315	5494	5516	13371	13371					0.07307399926321523
ILHARAFVI	9	Unmodified	_ILHARAFVI_					0	0	0			REV__ENSG00000104660|ENST00000321250|LEPROTL1	REV__ENSG00000104660|ENST00000321250|LEPROTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3271362185478	2	520.324194	1038.63383	2.8201	0.0014674	3.2727	0.0017029	6.0929	0.0031703	520.3269298482049	44.791	0.4413	46.157	46.023	46.464	1.3653					26	13	3	0	0	0	0.34572	1	18744	18744		23.148	2.2772	1	1737700	+		11045	9141	5495	5517	13372	13372					0.11606336193403877
ILHELISEL	9	Unmodified	_ILHELISEL_					0	0	0			REV__ENST00000537553.5_1_12:30863433-30867904:-|nuORF	REV__ENST00000537553.5_1_12:30863433-30867904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.8121826052666	2	533.810782	1065.60701	1.2248	0.00065382	-0.092004	-4.9113E-05	1.1328	0.00060471	533.8107311100996	55.917	1.0515	57.885	57.641	58.693	1.9684					89	34	5	0	0	0	0.076627	1	23557	23557		57.471	0	1	86943000	+		11046	13759	5496	5518	13373	13373					0.07683182791561194
ILHKAPAL	8	Unmodified	_ILHKAPAL_					0	0	0			REV__ENSG00000145632|ENST00000274289|PLK2	REV__ENSG00000145632|ENST00000274289|PLK2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	431.2480041384697	2	431.779088	861.543623	3.2962	0.0014232	-3.575	-0.0015436	-0.27879	-0.00012038	431.777205291407	107.76	0.14709	107.92	107.85	107.99	0.15796					12	7	2	0	0	0	2.3239	1	46427	46427		0.79363	0	1	22974000	+		11047	10278	5497	5519	13374	13374					0.10731286864972844
ILHKKHTKK	9	Unmodified	_ILHKKHTKK_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2517272830009	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.44	1	100.51	100.01	101.01	0.072716								0	0	0	0.42693	1	42050	42050		0.26902	0.033176	1				11048	1129	5498	5520	13375	13375					0.1634538552182221
ILHKKHTKK	9	Unmodified	_ILHKKHTKK_					0	0	0		ENST00000555762.1_1_14:94524146-94547480:-|nuORF;nc|ENSG00000089737|Q9GZR7-2|DDX24;ENSG00000089737|ENST00000621632|DDX24	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	ENST00000555762.1_1_14:94524146-94547480:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2492858767509	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.699	1	93.976	93.476	94.476	1.277								0	0	0	0.42693	1	39013	39013		0	0	1				11049	1129	5498	5520	13376	13376					0.1634538552182221
ILHKVKMH	8	Unmodified	_ILHKVKMH_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	503.2006408572197	2	503.304947	1004.59534	1.47	0.00073984	-1.0652	-0.00053612	0.40476	0.00020372	503.805914721639	42.188	0.1853	44.109	44.011	44.196	1.9211					7	5	2	0	0	0	2.3239	1	17678	17678		6.3541	3.4649	1	1624800	+		11050	8844	5499	5521	13377	13377					0.09322707287242338
ILHRMVIH	8	Unmodified	_ILHRMVIH_					0	0	0		ENSG00000183735|ENST00000331710|TBK1;TBK1|p.E437Nfs*2|1|0.06|ENSG00000183735|chr12:64485985-64485985|G/-|frameshift_variant	ENSG00000183735|ENST00000331710|TBK1	ENSG00000183735|ENST00000331710|TBK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8061401247978	2	509.802571	1017.59059	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.677	1	66.677	66.177	67.177	0								0	0	0	1.0178	1	27772	27772		2.8892	0	1				11051	4662	5500	5522	13378	13378					0.08249823144478796
ILHYTSKKL	9	Unmodified	_ILHYTSKKL_					0	0	0			REV__tr|A0A553SJH2|A0A553SJH2_NIACIGlyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16565PE=3SV=1	REV__tr|A0A553SJH2|A0A553SJH2_NIACIGlyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16565PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	551.7953979372978	2	551.834591	1101.65463	3.1039	0.0017128	-1.5773	-0.00087044	1.5265	0.0008424	551.8332825024578	74.544	0.18016	75.855	75.761	75.941	1.3107					7	5	2	0	0	0	0.097511	1	31261	31261		16.942	9.0321	1	428950	+		11052	14905	5501	5523	13379	13379					0.10786881782428281
ILIACLWSF	9	Unmodified	_ILIACLWSF_					0	0	0			REV__ENSG00000182447|ENST00000327928|OTOL1	REV__ENSG00000182447|ENST00000327928|OTOL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.7816039919853	2	533.293714	1064.57287	2.4038	0.0012819	2.4317	0.0012968	4.8356	0.0025788	533.295022252937	71.672	0.53609	73.496	73.129	73.665	1.824					23	9	3	0	0	0	0.11333	1	29932	29932		8.5933	0.68312	1	1692600	+		11053	11352	5502	5524	13380	13380					0.04317063098960716
ILIDWLVQV	9	Unmodified	_ILIDWLVQV_					0	0	0		CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;CCNB1|p.G359Lfs*6|1|0.05|ENSG00000134057|chr5:69175528-69175529|-/CTCCTTCATCATA|frameshift_variant;nc|ENSG00000134057|P14635-2|CCNB1;ENSG00000134057|ENST00000256442|CCNB1	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2202026247978	2	549.831517	1097.64848	2.707	0.0014884	2.3762	0.0013065	5.0832	0.0027949	549.8335220712169	97.42	0.12776	97.511	97.431	97.559	0.090881					5	3	2	0	0	0	0.10591	1	40756	40756		12.532	0.89125	1	1829300			11054	125	5503	5525	13381	13381					0.10356363550909009
ILIDWLVQV	9	Unmodified	_ILIDWLVQV_					0	0	0		CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;CCNB1|p.G359Lfs*6|1|0.05|ENSG00000134057|chr5:69175528-69175529|-/CTCCTTCATCATA|frameshift_variant;nc|ENSG00000134057|P14635-2|CCNB1;ENSG00000134057|ENST00000256442|CCNB1	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	549.831517	1097.64848	1.0852	0.00059668	1.4654	0.00080572	2.5506	0.0014024	549.8326029483347	97.522	0.12292	97.522	97.446	97.569	0	0.005424	-0.00028317	NaN	12.532	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3023000			11055	125	5503	5525							0.10356363550909009
ILIEAKKDANL	11	Unmodified	_ILIEAKKDANL_					0	0	0			REV__nc|ENSG00000129422|Q9ULD2-5|MTUS1	REV__nc|ENSG00000129422|Q9ULD2-5|MTUS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3693725466728	2	614.368995	1226.72344	1.2428	0.00076355	0.59244	0.00036398	1.8353	0.0011275	614.3694053212108	69.544	0.40899	69.866	69.657	70.066	0.32224					44	12	4	0	0	0	0.89563	1	29051	29051		10.074	1.3285	1	12999000	+		11056	9756	5504	5526	13382	13382					0.11914501291471424
ILIENMLKCMD	11	Unmodified	_ILIENMLKCMD_					0	0	0		tr|A0A7D6ZZC5|A0A7D6ZZC5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05765PE=4SV=1	tr|A0A7D6ZZC5|A0A7D6ZZC5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05765PE=4SV=1	tr|A0A7D6ZZC5|A0A7D6ZZC5_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.8281127810478	2	661.829477	1321.6444	1.295	0.00085706	-3.2531	-0.002153	-1.9581	-0.001296	661.8277121832884	53.97	0.59847	55.371	55.138	55.736	1.4019					46	19	3	0	0	0	0.92747	1	22681	22681		8.1555	0	1	4200700			11057	17208	5505	5527	13383	13383					-0.0035555332101466774
ILIEYFDP	8	Unmodified	_ILIEYFDP_					0	0	0			REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.1804687380791	3	337.179543	1008.5168	0.69534	0.00023445	1.3049	0.00043999	2.0003	0.00067445	337.18014877669236	69.147	0.36029	70.513	70.284	70.645	1.3657					29	11	3	0	0	0	0.67986	1	29021	29021		32.305	0	1	3749800	+		11058	13656	5506	5528	13384	13384					0.012881334631401842
ILIEYFDP	8	Unmodified	_ILIEYFDP_					0	0	0			REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.1804382205009	3	337.179543	1008.5168	1.2049	0.00040628	-0.37767	-0.00012734	0.82726	0.00027893	337.1795380936688	68.601	0.27673	70.454	70.281	70.558	1.853					21	8	3	0	0	0	0.67986	2	28751	28751;28799		32.305	5.4218	1	3930300	+		11059	13656	5506	5528	13385;13386	13385					0.012881334631401842
ILIEYFDP	8	Unmodified	_ILIEYFDP_					0	0	0			REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	337.179543	1008.5168	-1.7775	-0.00059932	2.1028	0.00070904	0.32539	0.00010972	337.18041766203635	70.638	0.27357	70.638	70.537	70.811	0	0.11378	0.0018569	NaN	32.305	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	908570	+		11060	13656	5506	5528							0.012881334631401842
ILIEYFDP	8	Unmodified	_ILIEYFDP_					0	0	0			REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	REV__ENST00000525040.5_1_11:9801967-9809483:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	337.179543	1008.5168	1.2049	0.00040628	-0.37767	-0.00012734	0.82726	0.00027893	337.1795380936688	68.601	0.27673	70.454	70.281	70.558	1.853	-0.070566	-0.00065223	NaN	32.305	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3930300	+		11061	13656	5506	5528							0.012881334631401842
ILIGETIKI	9	Unmodified	_ILIGETIKI_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1;PTGS2|p.K432Sfs*7|1|0.14|ENSG00000073756|chr1:186675358-186675359|TT/-|frameshift_variant;ENSG00000073756|ENST00000367468|PTGS2	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3271362185478	2	500.326068	998.637583	0.55803	0.0002792	0.31092	0.00015556	0.86895	0.00043476	500.32605885900347	57.917	0.21494	59.335	59.209	59.424	1.4181					18	12	2	0	0	0	0.033102	1	24275	24275		82.529	16.073	1	5184600			11062	1183	5507	5529	13387	13387					0.1382096117661149
ILIGETIKI	9	Unmodified	_ILIGETIKI_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1;PTGS2|p.K432Sfs*7|1|0.14|ENSG00000073756|chr1:186675358-186675359|TT/-|frameshift_variant;ENSG00000073756|ENST00000367468|PTGS2	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3253356814384	2	500.326068	998.637583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.377	1	59.346	58.846	59.846	1.9684								0	0	0	0.026323	1	24068	24068		72.968	11.61	1				11063	1183	5507	5529	13388	13388					0.1382096117661149
ILIGETIKI	9	Unmodified	_ILIGETIKI_					0	0	0		nc|ENSG00000095303|P23219-4|PTGS1;ENSG00000095303|ENST00000362012|PTGS1;nc|ENSG00000095303|P23219-6|PTGS1;nc|ENSG00000095303|P23219-5|PTGS1;nc|ENSG00000095303|P23219-3|PTGS1;nc|ENSG00000095303|P23219-2|PTGS1;PTGS2|p.K432Sfs*7|1|0.14|ENSG00000073756|chr1:186675358-186675359|TT/-|frameshift_variant;ENSG00000073756|ENST00000367468|PTGS2	nc|ENSG00000095303|P23219-4|PTGS1	nc|ENSG00000095303|P23219-4|PTGS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	500.326068	998.637583	3.0208	0.0015114	-1.5074	-0.00075418	1.5134	0.00075719	500.32494693514286	59.173	0.059135	59.499	59.465	59.524	0.32553	0.081824	-0.0014021	NaN	82.529	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1841900			11064	1183	5507	5529							0.1382096117661149
ILIHLVTN	8	Unmodified	_ILIHLVTN_					0	0	0			REV__ENSG00000165125|ENST00000359396|TRPV6	REV__ENSG00000165125|ENST00000359396|TRPV6	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.1954528689384	3	308.195527	921.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.022	1	14.768	14.268	15.268	0.74612								0	0	0	1.0178	1	5825	5825		0.45834	0	1		+		11065	10766	5508	5530	13389	13389					0.10083252173865276
ILIISGLILV	10	Unmodified	_ILIISGLILV_					0	0	0			REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3680297732353	2	527.367736	1052.72092	1.9805	0.0010445	-1.3216	-0.00069698	0.6589	0.00034748	527.3666115822084	75.474	0.28603	75.474	75.342	75.628	0					13	8	2	0	0	0	0.41677	1	31436	31436		32.305	1.6689	1	471420	+		11066	15389	5509	5531	13390	13390					0.1966669762446145
ILIISGLILV	10	Unmodified	_ILIISGLILV_					0	0	0			REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	527.367736	1052.72092	1.9805	0.0010445	-1.3216	-0.00069698	0.6589	0.00034748	527.3666115822084	75.474	0.28603	75.474	75.342	75.628	0	0.29231	-0.00037727	NaN	32.305	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	471420	+		11067	15389	5509	5531							0.1966669762446145
ILIISGLILV	10	Unmodified	_ILIISGLILV_					0	0	0			REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	527.367736	1052.72092	2.7422	0.0014462	-0.23853	-0.0001258	2.5037	0.0013204	527.3675533344979	74.897	0.24763	75.221	75.082	75.329	0.32464	0.039723	0.00076509	NaN	32.305	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776030	+		11068	15389	5509	5531							0.1966669762446145
ILIISGLILV	10	Unmodified	_ILIISGLILV_					0	0	0			REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.367736	1052.72092	3.5307	0.001862	-1.9022	-0.0010032	1.6285	0.00085881	527.3664197125366	73.729	0.31458	75.047	74.904	75.218	1.318	-0.1346	-0.00098967	NaN	32.305	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	676550	+		11069	15389	5509	5531							0.1966669762446145
ILIISGLILV	10	Unmodified	_ILIISGLILV_					0	0	0			REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	REV__tr|A0A7D6VQR4|A0A7D6VQR4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04475PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	527.367736	1052.72092	2.7089	0.0014286	-1.0155	-0.00053554	1.6934	0.00089303	527.3669461060109	73.174	0.34941	74.984	74.828	75.177	1.8101	-0.19744	-5.4399E-05	NaN	32.305	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	613450	+		11070	15389	5509	5531							0.1966669762446145
ILILVLFMH	9	Unmodified	_ILILVLFMH_					0	0	0		tr|A0A7D7A564|A0A7D7A564_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=lonBPE=3SV=1	tr|A0A7D7A564|A0A7D7A564_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=lonBPE=3SV=1	tr|A0A7D7A564|A0A7D7A564_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=lonBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1098.675463855267	1	1098.67439	1097.66711	1.3258	0.0014566	0.89532	0.00098366	2.2211	0.0024403	1098.6739404680654	108.5	0.16249	108.5	108.42	108.58	0					9	6	2	0	0	0	0.84963	1	46757	46757		0.6015	0	1	10763000			11071	17295	5510	5532	13391	13391					0.1221820192110954
ILIPMQVIL	9	Unmodified	_ILIPMQVIL_					0	0	0			REV__tr|A0A553SHL7|A0A553SHL7_NIACIMembraneproteininsertaseYidCOS=NialliacirculansOX=1397GN=yidCPE=3SV=1	REV__tr|A0A553SHL7|A0A553SHL7_NIACIMembraneproteininsertaseYidCOS=NialliacirculansOX=1397GN=yidCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2244445681572	3	347.224318	1038.65112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.818	1	51.147	50.647	51.647	0.32824								0	0	0	0.42693	1	21290	21290		0.26902	0	1		+		11072	14801	5511	5533	13392	13392					0.13334495684216563
ILIPTEPGEL	10	Unmodified	_ILIPTEPGEL_					0	0	0			REV__tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	REV__tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3123046755791	2	541.310615	1080.60668	1.9829	0.0010734	0.60639	0.00032825	2.5893	0.0014016	541.3107388402296	82.606	0.30619	82.606	82.43	82.737	0					16	9	2	0	0	0	0.80568	1	34395	34395		11.64	3.047	1	1774600	+		11073	14821	5512	5534	13393	13393					0.06959763071699854
ILIPTEPGEL	10	Unmodified	_ILIPTEPGEL_					0	0	0			REV__tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	REV__tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3128539919853	2	541.310615	1080.60668	3.1513	0.0017059	1.0323	0.00055878	4.1836	0.0022646	541.310960267329	81.131	0.3714	82.364	82.161	82.533	1.2332					27	11	3	0	0	0	0.62746	1	34041	34041		21.747	6.9084	1	6265900	+		11074	14821	5512	5534	13394	13394					0.06959763071699854
ILIQSIPVIFH	11	Unmodified	_ILIQSIPVIFH_					0	0	0			REV__ENSG00000231738|ENST00000532498|TSPAN19	REV__ENSG00000231738|ENST00000532498|TSPAN19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2647582888603	3	427.263941	1278.76999	2.3557	0.0010065	0.5594	0.00023901	2.9151	0.0012455	427.26411590084575	40.132	0.73301	41.442	41.086	41.819	1.3102					102	23	5	0	0	0	0.9945	1	16961	16961		4.1166	1.2733	1	54439000	+		11075	11898	5513	5535	13395	13395					0.14175985913402656
ILIRKLFLRRC	11	Unmodified	_ILIRKLFLRRC_					0	0	0		ENST00000571368.5_1_17:4442349-4442634:-|nuORF	ENST00000571368.5_1_17:4442349-4442634:-|nuORF	ENST00000571368.5_1_17:4442349-4442634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	358.4846374392509	4	358.483971	1429.90678	-1.0936	-0.00039205	1.6708	0.00059896	0.57718	0.00020691	358.4845439172247	38.64	0.35095	38.64	38.539	38.89	0					30	15	3	0	0	0	1.0388	1	16230	16230		0.50596	0	1	1818900			11076	7394	5514	5536	13396	13396					0.209021965921238
ILISNQSFF	9	Unmodified	_ILISNQSFF_					0	0	0			REV__nc|ENSG00000131849|P52740-2|ZNF132	REV__nc|ENSG00000131849|P52740-2|ZNF132	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	357.2848388552666	3	356.862325	1067.56515	0.16642	5.9391E-05	-2.3727	-0.00084673	-2.2063	-0.00078734	356.86199324815533	23.967	0.2185	25.652	25.504	25.722	1.6845					14	6	3	0	0	0	0.11891	1	10013	10013		2.9952	1.151	1	577270	+		11077	9830	5515	5537	13397	13397					0.034066271030496864
ILISQSKSL	9	Unmodified	_ILISQSKSL_					0	0	0			REV__nc|ENSG00000164114|Q49MG5-2|MAP9	REV__nc|ENSG00000164114|Q49MG5-2|MAP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8068115115166	2	494.8055	987.596446	1.9546	0.00096714	0.643	0.00031816	2.5976	0.0012853	494.80591237000914	69.121	0.45395	70.486	70.22	70.674	1.3657					50	14	5	0	0	0	0.22519	1	29030	29030		30.225	0	1	54348000	+		11078	10717	5516	5538	13398	13398					0.10215200137145075
ILIYIRLLFVS	11	Unmodified	_ILIYIRLLFVS_					0	0	0			REV__sp|P09723|US21_HCMVAUncharacterizedproteinHWLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US21PE=3SV=1	REV__sp|P09723|US21_HCMVAUncharacterizedproteinHWLF2OS=Humancytomegalovirus(strainAD169)OX=10360GN=US21PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	675.4265624880791	2	675.431399	1348.84824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.65	1	104.71	104.21	105.21	0.056801								0	0	0	0.63775	1	44184	44184		0.35063	0	1		+		11079	14648	5517	5539	13399	13399					0.18777418498621046
ILIYLRNLK	9	Unmodified	_ILIYLRNLK_					0	0	0		ENST00000368891.9_1_10:124697547-124708177:-|nuORF	ENST00000368891.9_1_10:124697547-124708177:-|nuORF	ENST00000368891.9_1_10:124697547-124708177:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3729125857353	2	573.373884	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.654	1	54.05	53.55	54.55	1.3966								0	0	0	0.40633	1	22043	22043		7.9102	0	1				11080	6091	5518	5540	13400	13400					0.16663734087501325
ILKAMPVIECD	11	Unmodified	_ILKAMPVIECD_					0	0	0			REV__tr|A0A7D6VNW5|A0A7D6VNW5_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20635PE=4SV=1	REV__tr|A0A7D6VNW5|A0A7D6VNW5_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20635PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	615.9094116091728	2	616.324885	1230.63522	0.28887	0.00017804	-2.6563	-0.0016371	-2.3674	-0.0014591	616.3232786179668	21.51	0.18177	23.126	23.05	23.232	1.6158					7	5	2	0	0	0	0.14606	1	8949	8949		5.7319	0	1	286090	+		11081	15344	5519	5541	13401	13401					0.02912421384985464
ILKAVIPKVKP	11	Unmodified	_ILKAVIPKVKP_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	603.5389892458916	2	603.420834	1204.82712	1.5702	0.00094752	-3.85	-0.0023232	-2.2798	-0.0013757	603.4186418555001	107.24	0.077316	107.24	107.21	107.29	0					5	3	2	0	0	0	0.14606	1	45922	45922		0.30703	0.30703	1	2259300	+		11082	8881	5520	5542	13402	13402					0.23289453189772757
ILKDTQRK	8	Unmodified	_ILKDTQRK_					0	0	0		ENSG00000180432|ENST00000316161|CYP8B1	ENSG00000180432|ENST00000316161|CYP8B1	ENSG00000180432|ENST00000316161|CYP8B1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	500.8046142458916	2	501.308741	1000.60293	2.2419	0.0011239	1.4208	0.00071224	3.6627	0.0018361	501.3090206856461	43.978	0.15369	45.331	45.254	45.408	1.3536					5	4	2	0	0	0	2.3239	1	18438	18438		28.487	3.0875	1	1201100			11083	4547	5521	5543	13403	13403					0.10265138088516323
ILKHLKDIKVK	11	Unmodified	_ILKHLKDIKVK_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4780761599541	4	334.477512	1333.88094	-0.09511	-3.1812E-05	2.0978	0.00070167	2.0027	0.00066986	334.4782891349254	26.931	0.44378	28.202	27.901	28.345	1.2715					20	14	2	0	0	0	1.0402	2	11214	11214;11284		0.094841	0.094841	1	2867300			11084	4819	5522	5544	13404;13405	13404					0.22735625621453437
ILKHLKDIKVK	11	Unmodified	_ILKHLKDIKVK_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4789001345634	4	334.477512	1333.88094	-0.53941	-0.00018042	3.1578	0.0010562	2.6183	0.00087578	334.4784268717609	30.939	1.7248	32.222	31.75	33.474	1.2825					99	56	3	0	0	0	1.0402	2	12954	12954;13212		0.094841	0.094841	1	902900			11085	4819	5522	5544	13406;13407	13406					0.22735625621453437
ILKHLKDIKVK	11	Unmodified	_ILKHLKDIKVK_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4781371951103	4	334.477512	1333.88094	0.06351	2.1243E-05	2.206	0.00073787	2.2695	0.00075911	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	3	10239	10239;10317;10700		0.094841	0.094841	1	234860000			11086	4819	5522	5544	13408;13409;13410	13408					0.22735625621453437
ILKHLKDIKVK	11	Unmodified	_ILKHLKDIKVK_					0	0	0		nc|ENSG00000187109|P55209-3|NAP1L1;nc|ENSG00000187109|P55209-2|NAP1L1;ENSG00000187109|ENST00000618691|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4782592654228	4	334.477512	1333.88094	0.12602	4.215E-05	1.5388	0.0005147	1.6648	0.00055685	334.4780520676026	26.002	0.8155	27.718	27.492	28.307	1.7167					50	26	2	0	0	0	1.0402	2	10953	10953;11089		0.094841	0.011491	1	4249200			11087	4819	5522	5544	13411;13412	13411					0.22735625621453437
ILKLCDRFS	9	Unmodified	_ILKLCDRFS_					0	0	0			REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.5395995974541	3	365.539077	1093.5954	-1.454	-0.00053151	2.3534	0.00086027	0.8994	0.00032877	365.54005726760084	25.357	0.52269	25.357	25.102	25.625	0					55	16	5	0	0	0	0.16939	1	10626	10626		36.506	0.37917	1	6644900	+		11088	12568	5523	5545	13413	13413					0.05234662496582132
ILKLCDRFS	9	Unmodified	_ILKLCDRFS_					0	0	0			REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	365.539077	1093.5954	0.64208	0.0002347	0.53754	0.00019649	1.1796	0.0004312	365.5392118914454	24.976	0.40089	25.228	25.027	25.428	0.25197	0.036893	-0.00056465	NaN	36.506	39	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3220200	+		11089	12568	5523	5545							0.05234662496582132
ILKMVKHPN	9	Unmodified	_ILKMVKHPN_					0	0	0		ENST00000483811.5_1_3:49899222-49899827:-|nuORF;ENST00000475665.5_1_3:49898454-49899827:-|nuORF;nc|ENSG00000164076|Q8NCB2-3|CAMKV;nc|ENSG00000164076|Q8NCB2-2|CAMKV;ENSG00000164076|ENST00000477224|CAMKV	ENST00000483811.5_1_3:49899222-49899827:-|nuORF	ENST00000483811.5_1_3:49899222-49899827:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.5749084353447	3	360.551317	1078.63212	-1.7325	-0.00062465	-3.3334	-0.0012019	-5.0659	-0.0018265	360.55066607366615	22.353	0.15586	22.353	22.276	22.432	0					6	4	2	0	0	0	0.11837	1	9328	9328		4.897	0	1	376620			11090	3746	5524	5546	13414	13414					0.0959495911315571
ILKQIEYRNLF	11	Unmodified	_ILKQIEYRNLF_					0	0	0		nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1;nc|ENSG00000101347|Q9Y3Z3-4|SAMHD1;ENSG00000101347|ENST00000646673|SAMHD1;SOGA1-SAMHD1|2|fusion;SOGA1-SAMHD1|1|fusion	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	nc|ENSG00000101347|Q9Y3Z3-3|SAMHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.6134216189384	3	479.613522	1435.81874	0.77287	0.00037068	-0.85626	-0.00041067	-0.083384	-3.9992E-05	479.6131509977272	51.118	0.33439	52.512	52.316	52.65	1.3938					26	10	3	0	0	0	1.0118	2	21401	21401;21453		3.0723	0.44103	1	2915300			11091	1339	5525	5547	13415;13416	13415					0.11825854482503928
ILKWMGISF	9	Unmodified	_ILKWMGISF_					0	0	0		tr|A0A7D6ZV77|A0A7D6ZV77_9CLOTProlineiminopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02825PE=3SV=1	tr|A0A7D6ZV77|A0A7D6ZV77_9CLOTProlineiminopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02825PE=3SV=1	tr|A0A7D6ZV77|A0A7D6ZV77_9CLOTProlineiminopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02825PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.5399047732353	3	365.540418	1093.59942	0.19709	7.2045E-05	-3.2838	-0.0012004	-3.0867	-0.0011283	365.5391852329433	23.418	0.37193	25.069	24.838	25.209	1.6511					26	11	3	0	0	0	0.69306	1	9815	9815		7.609	3.0801	1	1286300			11092	17148	5526	5548	13417	13417					0.05636751990277844
ILKWPRAINRG	11	Unmodified	_ILKWPRAINRG_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.7071716189384	4	331.705657	1322.79352	1.4128	0.00046864	2.9453	0.00097698	4.3581	0.0014456	331.7065594123919	44.86	0.3451	46.226	46.088	46.433	1.3653					19	10	2	0	0	0	1.0191	1	18826	18826		2.6312	1.039	1	3241400	+		11093	9666	5527	5549	13418	13418					0.14503844470573313
ILKYHFLLKDW	11	Unmodified	_ILKYHFLLKDW_					0	0	0			REV__tr|A0A7D7A250|A0A7D7A250_9CLOTGlutathionylspermidinesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18215PE=4SV=1	REV__tr|A0A7D7A250|A0A7D7A250_9CLOTGlutathionylspermidinesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18215PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	738.4222289919853	2	738.424105	1474.83366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.221	1	94.498	93.998	94.998	1.277								0	0	0	0.63775	1	39226	39226		3.2813	1.7994	1		+		11094	15842	5528	5550	13419	13419					0.11523346350486463
ILLAEVPTM	9	Unmodified	_ILLAEVPTM_					0	0	0		ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C;ENSG00000171453|ENST00000642195|POLR1C	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	494.3112975955009	2	493.783179	985.551804	2.1451	0.0010592	-2.4263	-0.0011981	-0.28118	-0.00013884	493.7824946816715	71.017	0.2249	71.34	71.174	71.399	0.32359					10	6	2	0	0	0	0.10591	1	29702	29702		18.135	10.846	1	476740			11095	4188	5529	5551	13420	13420					0.058450529994502176
ILLAEVPTM	9	Unmodified	_ILLAEVPTM_					0	0	0		ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C;ENSG00000171453|ENST00000642195|POLR1C	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7834045290947	2	493.783179	985.551804	2.6605	0.0013137	-2.8236	-0.0013943	-0.16313	-8.0549E-05	493.78271165067207	69.887	0.37592	71.241	70.99	71.366	1.3536					23	11	3	0	0	0	0.10294	1	29320	29320		48.346	22.005	1	2752600			11096	4188	5529	5551	13421	13421					0.058450529994502176
ILLAEVPTM	9	Unmodified	_ILLAEVPTM_					0	0	0		ENST00000481352.6_1_6:43484832-43487644:+|nuORF;nc|ENSG00000171453|O15160-2|POLR1C;ENSG00000171453|ENST00000642195|POLR1C	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	ENST00000481352.6_1_6:43484832-43487644:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7837097048759	2	493.783179	985.551804	2.0614	0.0010179	-2.1941	-0.0010834	-0.1327	-6.5524E-05	493.78252249527037	69.425	0.37899	71.278	70.977	71.356	1.853					17	11	2	0	0	0	0.10294	1	29100	29100		48.346	22.005	1	1920500			11097	4188	5529	5551	13422	13422					0.058450529994502176
ILLAITRELDV	11	Unmodified	_ILLAITRELDV_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3823730349541	2	628.384645	1254.75474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.741	1	94.018	93.518	94.518	1.277								0	0	0	0.63775	1	39030	39030		6.2058	1.8765	1		+		11098	9117	5530	5552	13423	13423					0.13755074325536043
ILLDERGQIKL	11	Unmodified	_ILLDERGQIKL_					0	0	0		ENST00000468058.1_1_19:7975099-7977313:+|nuORF;ENSG00000076984|ENST00000397979|MAP2K7;nc|ENSG00000076984|O14733-4|MAP2K7;nc|ENSG00000076984|O14733-3|MAP2K7;nc|ENSG00000076984|O14733-2|MAP2K7	ENST00000468058.1_1_19:7975099-7977313:+|nuORF	ENST00000468058.1_1_19:7975099-7977313:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2671996951103	3	433.266122	1296.77654	2.319	0.0010048	-1.3964	-0.00060502	0.92261	0.00039974	433.26541753910954	44.062	0.28366	46.005	45.831	46.115	1.9438					19	8	3	0	0	0	0.42741	1	18466	18466		26.121	2.1568	1	2615400			11099	953	5531	5553	13424	13424					0.14001879074135104
ILLDEYWAL	9	Unmodified	_ILLDEYWAL_					0	0	0		ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.3027831912041	2	568.305332	1134.59611	2.2175	0.0012602	-1.8267	-0.0010381	0.3908	0.00022209	568.3040006605672	73.593	0.47858	73.918	73.754	74.233	0.32494					22	14	2	0	0	0	0.22519	1	30777	30777		30.225	2.0516	1	1337400			11100	6814	5532	5554	13425	13425					0.03419780417266338
ILLDEYWAL	9	Unmodified	_ILLDEYWAL_					0	0	0		ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3055297732353	2	568.305332	1134.59611	3.3214	0.0018875	-1.0666	-0.00060615	2.2548	0.0012814	568.3043514896423	72.675	0.55959	74.005	73.852	74.412	1.3297					40	17	3	0	0	0	0.069258	2	30490	30490;30544		60.39	12.641	1	3365600			11101	6814	5532	5554	13426;13427	13426					0.03419780417266338
ILLDEYWAL	9	Unmodified	_ILLDEYWAL_					0	0	0		ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3051025271416	2	568.305332	1134.59611	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.27	1	74.08	73.58	74.58	1.8101								0	0	0	0.049731	1	30322	30322		60.39	12.641	1				11102	6814	5532	5554	13428	13428					0.03419780417266338
ILLDEYWAL	9	Unmodified	_ILLDEYWAL_					0	0	0		ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	ENST00000479870.5_1_7:143559536-143559908:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	568.305332	1134.59611	1.5013	0.00085321	-2.5124	-0.0014278	-1.011	-0.00057457	568.3030826955926	73.914	0.40887	73.914	73.764	74.173	0	-0.031473	-0.0011702	NaN	60.39	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899680			11103	6814	5532	5554							0.03419780417266338
ILLDRLFSV	9	Unmodified	_ILLDRLFSV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1;BNC2|p.P607Afs*4|1|0.05|ENSG00000173068|chr9:16436376-16436377|-/G|frameshift_variant;nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	538.7991210818291	2	538.329142	1074.64373	1.9423	0.0010456	-0.21109	-0.00011364	1.7312	0.00093196	538.3285949127677	77.812	0.34833	78.127	77.949	78.297	0.3151					16	10	2	0	0	0	0.10346	1	32522	32522		21.537	6.9553	1	577010			11104	4099	5533	5555	13429	13429					0.10939479408125408
ILLDRLFSV	9	Unmodified	_ILLDRLFSV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1;BNC2|p.P607Afs*4|1|0.05|ENSG00000173068|chr9:16436376-16436377|-/G|frameshift_variant;nc|ENSG00000173068|Q6ZN30-2|BNC2;ENSG00000173068|ENST00000380672|BNC2	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3305541872978	2	538.329142	1074.64373	2.7448	0.0014776	2.4414	0.0013143	5.1862	0.0027919	538.3292284578038	76.778	0.34221	78.072	77.92	78.262	1.2938					25	10	3	0	0	0	0.11317	1	32260	32260		55.235	15.285	1	2027300			11105	4099	5533	5555	13430	13430					0.10939479408125408
ILLDRLLYL	9	Unmodified	_ILLDRLLYL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.3620483279228	2	566.360442	1130.70633	2.3954	0.0013567	1.2986	0.00073549	3.694	0.0020922	566.3612104178283	84.448	0.3854	84.709	84.501	84.886	0.26083					24	11	3	0	0	0	0.087723	1	35314	35314		53.404	13.454	1	1293000			11106	3022	5534	5556	13431	13431					0.1462062547630012
ILLDRLLYL	9	Unmodified	_ILLDRLLYL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3609496951103	2	566.360442	1130.70633	1.9322	0.0010943	-0.62318	-0.00035295	1.309	0.00074139	566.3599553356906	83.483	0.4706	84.671	84.483	84.954	1.1879					36	14	4	0	0	0	0.019486	2	35066	35016;35066		99.755	34.52	1	3378200			11107	3022	5534	5556	13432;13433	13433					0.1462062547630012
ILLDRLLYL	9	Unmodified	_ILLDRLLYL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3598510622978	2	566.360442	1130.70633	2.3011	0.0013032	-1.685	-0.00095434	0.61605	0.00034891	566.3594440371897	83.007	0.43838	84.652	84.454	84.893	1.6448					27	13	3	0	0	0	0.046715	2	34827	34782;34827		70.332	22.583	1	4333900			11108	3022	5534	5556	13434;13435	13435					0.1462062547630012
ILLDRLLYL	9	Unmodified	_ILLDRLLYL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	566.360442	1130.70633	2.1499	0.0012176	0.61378	0.00034762	2.7637	0.0015652	566.3607615656473	85.072	0.352	85.072	84.909	85.261	0	0.29598	0.00089616	NaN	99.755	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1077500			11109	3022	5534	5556							0.1462062547630012
ILLFVPEYL	9	Unmodified	_ILLFVPEYL_					0	0	0		SLFN12|p.L196Ifs*5|1|0.21|ENSG00000172123|chr17:35422443-35422444|-/T|frameshift_variant;ENSG00000172123|ENST00000304905|SLFN12	SLFN12|p.L196Ifs*5|1|0.21|ENSG00000172123|chr17:35422443-35422444|-/T|frameshift_variant	SLFN12|p.L196Ifs*5|1|0.21|ENSG00000172123|chr17:35422443-35422444|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8317748904228	2	553.828443	1105.64233	2.5699	0.0014233	1.2057	0.00066775	3.7756	0.002091	553.8301011990817	72.697	1.2859	74.507	74.137	75.423	1.8101					83	40	3	0	0	0	0.76456	1	30585	30585		4.756	0.81161	1	1704700			11110	4228	5535	5557	13436	13436					0.09373845319373686
ILLGNYCVAV	10	Unmodified	_ILLGNYCVAV_					0	0	0		ENST00000379514.2_1_9:33503785-33510678:-|nuORF;ENSG00000165416|ENST00000310528|SUGT1;SUGT1-CNOT10|2|fusion;nc|ENSG00000165416|Q9Y2Z0|SUGT1;SUGT1-CNOT10|1|fusion	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	ENST00000379514.2_1_9:33503785-33510678:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	532.7627441287041	2	532.794078	1063.5736	1.7642	0.00093996	-0.61408	-0.00032718	1.1501	0.00061278	532.7945327567666	73.346	0.92348	73.346	72.964	73.888	0					40	29	3	0	0	0	0.12475	1	30422	30422		7.9102	0	1	931010			11111	3836	5536	5558	13437	13437					0.04435857748012495
ILLHLESEL	9	Unmodified	_ILLHLESEL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF;ENST00000395181.2_1_2:190176192-190176438:-|nuORF;ENST00000452408.1_1_6:28937132-28937360:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.8121826052666	2	533.810782	1065.60701	1.9231	0.0010266	0.58353	0.00031149	2.5066	0.0013381	533.8110882456832	58.185	0.74368	58.185	57.912	58.656	0					65	22	4	0	0	0	0.006164	3	24303	24227;24264;24303		117.6	24.777	1	14238000			11112	1724;7003	5537	5559	13438;13439;13440	13440					0.07683182791583931
ILLHLESEL	9	Unmodified	_ILLHLESEL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF;ENST00000395181.2_1_2:190176192-190176438:-|nuORF;ENST00000452408.1_1_6:28937132-28937360:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.8127319216728	2	533.810782	1065.60701	2.4506	0.0013081	0.77592	0.0004142	3.2265	0.0017223	533.8112256560784	57.643	0.66782	57.966	57.76	58.428	0.32298					54	20	4	0	0	0	0.006164	3	24183	24134;24183;24222		117.6	24.777	1	18210000			11113	1724;7003	5537	5559	13441;13442;13443	13442					0.07683182791583931
ILLHLESEL	9	Unmodified	_ILLHLESEL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF;ENST00000395181.2_1_2:190176192-190176438:-|nuORF;ENST00000452408.1_1_6:28937132-28937360:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.8117553591728	2	533.810782	1065.60701	1.0943	0.00058412	0.41987	0.00022413	1.5141	0.00080825	533.8110304146932	56.526	0.83304	57.941	57.658	58.491	1.4145					85	26	5	0	0	0	3.0906E-05	5	23722	23603;23645;23683;23722;23765		161.89	46.951	1	72113000			11114	1724;7003	5537	5559	13444;13445;13446;13447;13448	13447					0.07683182791583931
ILLHLESEL	9	Unmodified	_ILLHLESEL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF;ENST00000395181.2_1_2:190176192-190176438:-|nuORF;ENST00000452408.1_1_6:28937132-28937360:-|nuORF;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18;ENST00000506277.1_1_5:36886275-36886596:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.8112670779228	2	533.810782	1065.60701	1.2248	0.00065382	-0.092004	-4.9113E-05	1.1328	0.00060471	533.8107311100996	55.917	1.0515	57.885	57.641	58.693	1.9684					89	34	5	0	0	0	0.00025648	4	23438	23390;23438;23477;23516		139.54	43.702	1	86943000			11115	1724;7003	5537	5559	13449;13450;13451;13452	13450					0.07683182791583931
ILLIKALAL	9	Unmodified	_ILLIKALAL_					0	0	0			REV__MUC15|p.S197Lfs*27|1|0.04|ENSG00000169550|chr11:26565270-26565271|-/TGGAGGAAAACAA|frameshift_variant	REV__MUC15|p.S197Lfs*27|1|0.04|ENSG00000169550|chr11:26565270-26565271|-/TGGAGGAAAACAA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	484.3494445681572	2	484.349346	966.684139	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.707	1	33.985	33.485	34.485	1.2782								0	0	0	0.42693	1	13717	13717		2.3027	0	1		+		11116	14368	5538	5560	13453	13453					0.19946445798530021
ILLKRIHKKEL	11	Unmodified	_ILLKRIHKKEL_					0	0	0			REV__tr|A0A553SSV0|A0A553SSV0_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03775PE=3SV=1	REV__tr|A0A553SSV0|A0A553SSV0_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03775PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	348.2062560915947	4	348.486874	1389.91839	-1.5874	-0.00055318	0.94763	0.00033024	-0.63974	-0.00022294	348.487706394841	33.191	0.26802	33.191	33.122	33.39	0					9	8	2	0	0	0	0.14606	1	13897	13897		0.094841	0	1	175520	+		11117	15216	5539	5561	13454	13454					0.23902716887118913
ILLKWMVAP	9	Unmodified	_ILLKWMVAP_					0	0	0			REV__ENST00000399798.6_1_22:18075353-18075428:-|nuORF	REV__ENST00000399798.6_1_22:18075353-18075428:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	535.7879516482353	2	535.825181	1069.63581	1.9745	0.001058	2.3487	0.0012585	4.3233	0.0023165	535.8270486441529	65.449	0.15865	67.358	67.248	67.407	1.9085					5	4	2	0	0	0	0.10591	1	27467	27467		7.9102	0	1	360280	+		11118	12877	5540	5562	13455	13455					0.10377628886999446
ILLLHLWGW	9	Unmodified	_ILLLHLWGW_					0	0	0		ENST00000454036.6_2_20:44673649-44676200:+|nuORF	ENST00000454036.6_2_20:44673649-44676200:+|nuORF	ENST00000454036.6_2_20:44673649-44676200:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8450805544853	2	575.84222	1149.66989	2.13	0.0012265	0.15465	8.9056E-05	2.2846	0.0013156	575.8427526825832	73.255	0.79836	73.58	73.371	74.169	0.32494					33	25	2	0	0	0	0.82604	1	30752	30752		2.3027	0	1	1472100			11119	6635	5541	5563	13456	13456					0.1010379337028553
ILLLKTKST	9	Unmodified	_ILLLKTKST_					0	0	0			REV__ENST00000225728.7_1_17:6553302-6553395:-|nuORF	REV__ENST00000225728.7_1_17:6553302-6553395:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.8400756716728	2	508.839342	1015.66413	3.4331	0.0017469	-2.3927	-0.0012175	1.0404	0.00052939	508.83822073388643	107.57	0.28015	107.73	107.58	107.86	0.15796					51	14	5	0	0	0	0.83213	1	46277	46277		2.0598	1.3694	1	2911600000	+		11120	12090	5542	5564	13457	13457					0.1569265006794467
ILLLLSRGKFY	11	Unmodified	_ILLLLSRGKFY_					0	0	0		tr|A0A553SMW5|A0A553SMW5_NIACIPhosphatidylglycerollysyltransferaseOS=NialliacirculansOX=1397GN=mprFPE=3SV=1	tr|A0A553SMW5|A0A553SMW5_NIACIPhosphatidylglycerollysyltransferaseOS=NialliacirculansOX=1397GN=mprFPE=3SV=1	tr|A0A553SMW5|A0A553SMW5_NIACIPhosphatidylglycerollysyltransferaseOS=NialliacirculansOX=1397GN=mprFPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	332.1706420779228	4	331.460325	1321.81219	0.41874	0.00013879	1.6938	0.00056142	2.1125	0.00070022	331.46054140790017	45.956	0.5958	47.331	47.177	47.773	1.3751					31	18	2	0	0	0	0.14606	1	19321	19321		0.094841	0	1	649230			11121	16397	5543	5565	13458	13458					0.16415961321808936
ILLPFSETF	9	Unmodified	_ILLPFSETF_					0	0	0		ENSG00000183840|ENST00000329321|GPR39	ENSG00000183840|ENST00000329321|GPR39	ENSG00000183840|ENST00000329321|GPR39	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1916992068291	2	533.794601	1065.57465	3.0391	0.0016222	-0.68181	-0.00036395	2.3573	0.0012583	533.7937318439797	72.555	0.42816	73.885	73.672	74.101	1.3297					18	13	2	0	0	0	0.10306	1	30379	30379		19.439	8.3245	1	683080			11122	4672	5544	5566	13459	13459					0.044483953885674055
ILLPGDTWAP	10	Unmodified	_ILLPGDTWAP_					0	0	0		ENST00000589630.1_1_18:32822565-32822742:+|nuORF	ENST00000589630.1_1_18:32822565-32822742:+|nuORF	ENST00000589630.1_1_18:32822565-32822742:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.8006469607353	2	541.797675	1081.5808	1.8291	0.00099098	2.0987	0.0011371	3.9277	0.002128	541.798914554203	65.42	0.73379	67.328	67.001	67.735	1.9085					75	23	4	0	0	0	0.79742	2	27441	27441;27483		12.532	3.1841	1	11408000			11123	7475	5545	5567	13460;13461	13460					0.04326913620070627
ILLPLAPKV	9	Unmodified	_ILLPLAPKV_					0	0	0		ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	321.8922912478447	3	321.891556	962.652839	0.117	3.766E-05	3.2069	0.0010323	3.3239	0.0010699	321.8924628035148	23.648	0.49806	23.887	23.665	24.163	0.23883					30	15	3	0	0	0	0.8523	1	9887	9887		0.23584	0	1	914320			11124	7038	5546	5568	13462	13462					0.17001872764467407
ILLPLAPKV	9	Unmodified	_ILLPLAPKV_					0	0	0		ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	321.8924133181572	3	321.891556	962.652839	-0.10361	-3.3352E-05	3.0939	0.00099589	2.9903	0.00096254	321.8925172049769	22.453	0.31474	23.63	23.507	23.821	1.177					20	9	3	0	0	0	0.847	1	9387	9387		0.96228	0.72643	1	836900			11125	7038	5546	5568	13463	13463					0.17001872764467407
ILLPLAPKV	9	Unmodified	_ILLPLAPKV_					0	0	0		ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	ENST00000511909.5_1_4:122053805-122071269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	321.8923828005791	3	321.891556	962.652839	-0.14022	-4.5136E-05	3.0988	0.00099747	2.9586	0.00095233	321.8925643455493	22.039	0.31498	23.654	23.455	23.77	1.6158					21	9	3	0	0	0	0.8523	1	9174	9174		0.23584	0	1	1035600			11126	7038	5546	5568	13464	13464					0.17001872764467407
ILLPNMAEF	9	Unmodified	_ILLPNMAEF_					0	0	0		CHIC1|p.E121Afs*5|1|0.3|ENSG00000204116|chrX:73584423-73584438|CCAGAAGAATTTAAAA/-|frameshift_variant;nc|ENSG00000204116|Q5VXU3-2|CHIC1;ENSG00000204116|ENST00000373502|CHIC1	CHIC1|p.E121Afs*5|1|0.3|ENSG00000204116|chrX:73584423-73584438|CCAGAAGAATTTAAAA/-|frameshift_variant	CHIC1|p.E121Afs*5|1|0.3|ENSG00000204116|chrX:73584423-73584438|CCAGAAGAATTTAAAA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2817870974541	2	524.280803	1046.54705	2.6472	0.0013879	-3.0102	-0.0015782	-0.36298	-0.0001903	524.2805137782614	72.063	1.6506	73.887	73.129	74.779	1.824					132	52	6	0	0	0	0.51832	1	30347	30347		14.582	0	1	8531400			11127	154	5547	5569	13465	13465					0.025641688566793164
ILLQVPEIWP	10	Unmodified	_ILLQVPEIWP_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense;HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|17|1|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3600952029228	2	604.357899	1206.70125	3.6852	0.0022272	-0.68588	-0.00041452	2.9993	0.0018127	604.3572037593373	86.737	0.51268	87.829	87.606	88.118	1.0918					59	18	4	0	0	0	0.88022	3	36598	36548;36598;36651		3.5965	0.31518	1	23248000			11128	7632	5548	5570	13466;13467;13468	13467					0.10616321613701984
ILLQVPEIWP	10	Unmodified	_ILLQVPEIWP_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense;HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|17|1|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|80|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3596679568291	2	604.357899	1206.70125	4.1888	0.0025315	-1.3381	-0.00080871	2.8506	0.0017228	604.356793904882	86.369	0.59431	87.916	87.638	88.232	1.547					72	21	4	0	0	0	0.88022	2	36378	36327;36378		3.5965	2.1146	1	29157000			11129	7632	5548	5570	13469;13470	13470					0.10616321613701984
ILLRLWRVAR	10	Unmodified	_ILLRLWRVAR_					0	0	0		nc|ENSG00000122986|Q96D96-2|HVCN1;nc|ENSG00000122986|Q96D96-4|HVCN1;nc|ENSG00000122986|Q96D96-3|HVCN1;ENSG00000122986|ENST00000242607|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	433.2348205447197	3	432.618941	1294.83499	1.8737	0.0008106	-2.2045	-0.00095371	-0.3308	-0.00014311	432.6182470040329	45.973	1.1242	47.348	46.832	47.956	1.3751					64	35	2	0	0	0	0.12549	1	19088	19088		1.7423	0	1	5942000			11130	2177	5549	5571	13471	13471					0.1993702522993317
ILLTEQINL	9	Unmodified	_ILLTEQINL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;ENSG00000116793|ENST00000369604|PHTF1	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.8208495974541	2	528.818607	1055.62266	1.7828	0.00094275	-0.017476	-9.2415E-06	1.7653	0.00093351	528.8184807165721	72.126	0.31525	72.126	71.985	72.3	0					14	9	2	0	0	0	0.37357	1	30045	30045		21.747	2.3076	1	998250			11131	509	5550	5572	13472	13472					0.09707469308614236
ILLTEQINL	9	Unmodified	_ILLTEQINL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;ENSG00000116793|ENST00000369604|PHTF1	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8198119997978	2	528.818607	1055.62266	1.8121	0.00095826	-1.6996	-0.00089879	0.11245	5.9468E-05	528.8174646653434	71.559	0.31752	71.882	71.72	72.037	0.32359					14	9	2	0	0	0	0.24063	1	29973	29973		28.487	5.3384	1	640630			11132	509	5550	5572	13473	13473					0.09707469308614236
ILLTEQINL	9	Unmodified	_ILLTEQINL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;ENSG00000116793|ENST00000369604|PHTF1	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8195678591728	2	528.818607	1055.62266	2.5865	0.0013678	-0.18607	-9.8398E-05	2.4004	0.0012694	528.8185863265941	70.037	0.35384	71.875	71.719	72.073	1.8378					17	10	2	0	0	0	0.09539	1	29427	29427		50.855	18.55	1	1343300			11133	509	5550	5572	13474	13474					0.09707469308614236
ILLTEQINL	9	Unmodified	_ILLTEQINL_					0	0	0		nc|ENSG00000006576|Q8N3S3-3|PHTF2;nc|ENSG00000006576|Q8N3S3-2|PHTF2;ENSG00000006576|ENST00000416283|PHTF2;ENSG00000116793|ENST00000369604|PHTF1	nc|ENSG00000006576|Q8N3S3-3|PHTF2	nc|ENSG00000006576|Q8N3S3-3|PHTF2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	528.818607	1055.62266	2.9987	0.0015858	0.17672	9.3454E-05	3.1754	0.0016792	528.818791112483	70.567	0.48173	71.921	71.584	72.066	1.3536	-0.030263	0.00038874	NaN	50.855	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1933100			11134	509	5550	5572							0.09707469308614236
ILLTWFGLL	9	Unmodified	_ILLTWFGLL_					0	0	0			REV__ENSG00000177917|ENST00000326446|ARL6IP6	REV__ENSG00000177917|ENST00000326446|ARL6IP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3300048708916	2	538.331153	1074.64775	1.6568	0.00089188	-3.1311	-0.0016856	-1.4744	-0.0007937	538.3292163712305	78.361	0.50475	78.361	78.251	78.756	0					19	15	2	0	0	0	0.34572	1	32630	32630		23.148	0.41214	1	703540	+		11135	11227	5551	5573	13475	13475					0.11341568901866594
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.855	1	69.855	69.355	70.355	0								0	0	0	0.42693	1	29088	29088		0.23584	0	1		+		11136	15619	5552	5574	13476	13476					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.505	1	71.505	71.005	72.005	0								0	0	0	0.42693	1	29779	29779		0.23584	0	1		+		11137	15619	5552	5574	13477	13477					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.362	1	73.362	72.862	73.862	0								0	0	0	0.42693	1	30543	30543		0.23584	0	1		+		11138	15619	5552	5574	13478	13478					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529785037041	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.603	1	73.603	73.103	74.103	0								0	0	0	0.42693	1	30648	30648		0.23584	0	1		+		11139	15619	5552	5574	13479	13479					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.551	1	74.551	74.051	75.051	0								0	0	0	0.42693	1	31039	31039		0.23584	0	1		+		11140	15619	5552	5574	13480	13480					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.808	1	75.808	75.308	76.308	0								0	0	0	0.42693	1	31557	31557		0.23584	0	1		+		11141	15619	5552	5574	13481	13481					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.907	1	75.907	75.407	76.407	0								0	0	0	0.42693	1	31597	31597		0.23584	0	1		+		11142	15619	5552	5574	13482	13482					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.926	1	50.257	49.757	50.757	0.33019								0	0	0	0.42693	1	20919	20919		0.23584	0	1		+		11143	15619	5552	5574	13483	13483					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.674	1	61.002	60.502	61.502	0.32809								0	0	0	0.42693	1	25424	25424		0.23584	0	1		+		11144	15619	5552	5574	13484	13484					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.142	1	62.471	61.971	62.971	0.32974								0	0	0	0.42693	1	26035	26035		0.23584	0	1		+		11145	15619	5552	5574	13485	13485					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538329958916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.454	1	62.784	62.284	63.284	0.32974								0	0	0	0.42693	1	26167	26167		0.23584	0	1		+		11146	15619	5552	5574	13486	13486					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2538329958916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.859	1	47.234	46.734	47.734	1.3751								0	0	0	0.42693	1	19210	19210		0.23584	0	1		+		11147	15619	5552	5574	13487	13487					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.968	1	49.356	48.856	49.856	1.388								0	0	0	0.42693	1	20080	20080		0.23584	0	1		+		11148	15619	5552	5574	13488	13488					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2523681521416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.309	1	52.703	52.203	53.203	1.3938								0	0	0	0.42693	1	21484	21484		0.23584	0	1		+		11149	15619	5552	5574	13489	13489					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.482	1	49.458	48.958	49.958	1.976								0	0	0	0.42693	1	19887	19887		0.23584	0	1		+		11150	15619	5552	5574	13490	13490					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.6	1	49.576	49.076	50.076	1.976								0	0	0	0.42693	1	19936	19936		0.23584	0	1		+		11151	15619	5552	5574	13491	13491					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2533141970634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.191	1	50.168	49.668	50.668	1.9772								0	0	0	0.42693	1	20185	20185		0.23584	0	1		+		11152	15619	5552	5574	13492	13492					0.2017528800411128
ILLVLYLLK	9	Unmodified	_ILLVLYLLK_					0	0	0			REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	REV__tr|A0A7D6W3Y7|A0A7D6W3Y7_9CLOTO-antigenligasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.67	1	53.642	53.142	54.142	1.9722								0	0	0	0.42693	1	21652	21652		0.23584	0	1		+		11153	15619	5552	5574	13493	13493					0.2017528800411128
ILLVVLYKY	9	Unmodified	_ILLVVLYKY_					0	0	0		nc|ENSG00000080815|P49768-3|PSEN1;nc|ENSG00000080815|P49768-5|PSEN1;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;ENSG00000080815|ENST00000324501|PSEN1;nc|ENSG00000080815|P49768-4|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3623535037041	2	562.359911	1122.70527	1.1999	0.0006748	1.8356	0.0010322	3.0355	0.001707	562.3611485477054	95.905	0.17776	95.905	95.773	95.95	0					10	5	2	0	0	0	0.85019	1	40098	40098		0.52476	0	1	2029700			11154	1009	5553	5575	13494	13494					0.1488241110744184
ILLVYLIFRIQ	11	Unmodified	_ILLVYLIFRIQ_					0	0	0		tr|A0A553SUQ2|A0A553SUQ2_NIACIPotassium-transportingATPasepotassium-bindingsubunitOS=NialliacirculansOX=1397GN=kdpAPE=3SV=1	tr|A0A553SUQ2|A0A553SUQ2_NIACIPotassium-transportingATPasepotassium-bindingsubunitOS=NialliacirculansOX=1397GN=kdpAPE=3SV=1	tr|A0A553SUQ2|A0A553SUQ2_NIACIPotassium-transportingATPasepotassium-bindingsubunitOS=NialliacirculansOX=1397GN=kdpAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.7271911501884	4	348.475975	1389.87479	0.77962	0.00027168	0.26263	9.1521E-05	1.0423	0.0003632	348.4760796759304	30.759	0.97569	31.045	30.469	31.444	0.2859					88	32	3	0	0	0	1.039	1	12946	12946		0.45452	0	1	3326500			11155	16703	5554	5576	13495	13495					0.19545107390013072
ILLYFHRYRDR	11	Unmodified	_ILLYFHRYRDR_					0	0	0			REV__ENST00000519875.1_1_8:21997445-21997756:-|nuORF	REV__ENST00000519875.1_1_8:21997445-21997756:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	517.2942382693291	3	517.956282	1550.84702	2.1409	0.0011089	1.3761	0.00071274	3.517	0.0018216	517.9576695712557	54.436	0.75407	54.436	54.314	55.068	0					33	25	2	0	0	0	0.14606	1	22859	22859		1.3296	0.87513	1	720650	+		11156	13620	5555	5577	13496	13496					0.09362597182439458
ILMDERTFL	9	Unmodified	_ILMDERTFL_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion;XPO1-USP34|3|fusion;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;XPO1-USP34|1|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.3032714724541	2	569.302267	1136.58998	1.6412	0.00093432	0.63486	0.00036143	2.276	0.0012958	569.302442928522	57.733	0.31721	57.733	57.564	57.881	0					20	9	3	0	0	0	0.50272	2	24064	24064;24115		15.248	3.6082	1	1321800			11157	1922	5556	5578	13497;13498	13497					0.027149389141186475
ILMDERTFL	9	Unmodified	_ILMDERTFL_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion;XPO1-USP34|3|fusion;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;XPO1-USP34|1|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	569.3026611208916	2	569.302267	1136.58998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.243	1	57.564	57.064	58.064	0.32103								0	0	0	0.27844	1	24003	24003		20.415	5.5763	1				11158	1922	5556	5578	13499	13499					0.027149389141186475
ILMDERTFL	9	Unmodified	_ILMDERTFL_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion;XPO1-USP34|3|fusion;ENST00000463046.5_1_2:61417336-61434009:-|nuORF;XPO1-USP34|1|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8035766482353	2	569.302267	1136.58998	0.54327	0.00030928	-0.54377	-0.00030957	-0.00049711	-2.8301E-07	569.3012363798867	55.537	0.23405	57.506	57.432	57.666	1.9684					14	11	2	0	0	0	0.1388	1	23321	23321		39.95	9.7249	1	3400000			11159	1922	5556	5578	13500	13500					0.027149389141186475
ILMDILPLFVH	11	Unmodified	_ILMDILPLFVH_					0	0	0			REV__ENSG00000131969|ENST00000337334|ABHD12B	REV__ENSG00000131969|ENST00000337334|ABHD12B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.1995117068291	4	328.44398	1309.74682	0.65868	0.00021634	-1.66	-0.0005452	-1.0013	-0.00032886	328.44319652542754	32.757	0.39049	33.052	32.836	33.227	0.29431					26	13	3	0	0	0	0.14606	1	13825	13825		2.8433	0.21205	1	1357400	+		11160	9833	5557	5579	13501	13501					0.10433223804420777
ILMEFLLNV	9	Unmodified	_ILMEFLLNV_					0	0	0		ENSG00000140740|ENST00000268379|UQCRC2;ENST00000563711.5_1_16:21973998-21987565:+|nuORF	ENSG00000140740|ENST00000268379|UQCRC2	ENSG00000140740|ENST00000268379|UQCRC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3103515505791	2	546.312103	1090.60965	1.146	0.00062605	0.90531	0.00049458	2.0513	0.0011206	546.3125841702148	97.645	0.12126	97.645	97.569	97.69	0					5	3	2	0	0	0	0.1735	1	40821	40821		36.044	16.605	1	1491600			11161	2932	5558	5580	13502	13502					0.06797314924870079
ILMEFLLNV	9	Unmodified	_ILMEFLLNV_					0	0	0		ENSG00000140740|ENST00000268379|UQCRC2;ENST00000563711.5_1_16:21973998-21987565:+|nuORF	ENSG00000140740|ENST00000268379|UQCRC2	ENSG00000140740|ENST00000268379|UQCRC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3127319216728	2	546.312103	1090.60965	3.5374	0.0019325	-4.0092	-0.0021902	-0.47176	-0.00025773	546.3100647376732	97.427	0.19864	97.711	97.63	97.828	0.28442					16	7	3	0	0	0	0.051699	1	40986	40986		67.344	25.249	1	9819400			11162	2932	5558	5580	13503	13503					0.06797314924870079
ILMEFLLNV	9	Unmodified	_ILMEFLLNV_					0	0	0		ENSG00000140740|ENST00000268379|UQCRC2;ENST00000563711.5_1_16:21973998-21987565:+|nuORF	ENSG00000140740|ENST00000268379|UQCRC2	ENSG00000140740|ENST00000268379|UQCRC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3123657107353	2	546.312103	1090.60965	3.2426	0.0017715	-2.4321	-0.0013287	0.81046	0.00044276	546.31095906995	97.316	0.17624	97.622	97.538	97.715	0.3062					8	6	2	0	0	0	0.09539	1	40933	40933		50.855	8.7605	1	6968600			11163	2932	5558	5580	13504	13504					0.06797314924870079
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.5552245974541	3	378.554838	1132.64269	-1.1193	-0.00042372	1.5301	0.00057923	0.4108	0.00015551	378.5555532977246	24.245	1.6633	24.245	23.902	25.565	0					131	53	4	0	0	0	0.053939	8	10203	10046;10095;10147;10203;10252;10305;10362;10425		53.317	30.703	1	3151700			11164	1628;6509	5559	5581	13505;13506;13507;13508;13509;13510;13511;13512	13508					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5549804568291	3	378.554838	1132.64269	0.70215	0.0002658	-0.46602	-0.00017641	0.23613	8.939E-05	378.55471580898734	23.908	1.8121	24.151	23.823	25.636	0.24251					149	58	4	0	0	0	0.040497	8	9986	9897;9947;9986;10029;10083;10135;10230;10278		61.09	34.822	1	6210100			11165	1628;6509	5559	5581	13513;13514;13515;13516;13517;13518;13519;13520	13515					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.5550109744072	3	378.554838	1132.64269	0.36157	0.00013688	-0.34561	-0.00013083	0.015968	6.0447E-06	378.55477449508174	22.599	1.8232	23.813	23.482	25.305	1.2145					167	58	5	0	0	0	0.063746	8	9401	9401;9446;9496;9537;9580;9630;9679;9726		57.249	25.212	1	20974000			11166	1628;6509	5559	5581	13521;13522;13523;13524;13525;13526;13527;13528	13521					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3297607302666	2	567.328619	1132.64269	1.2249	0.00069491	-0.48272	-0.00027386	0.74216	0.00042105	567.3283636294454	22.629	0.3998	23.843	23.64	24.04	1.2145					26	12	3	0	0	0	0.20244	1	9424	9424		32.786	19.743	1	1137500			11167	1628;6509	5559	5581	13529	13529					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5550414919853	3	378.554838	1132.64269	0.23417	8.8646E-05	-0.52412	-0.00019841	-0.28995	-0.00010976	378.55467210527064	22.139	1.6243	23.755	23.486	25.11	1.6158					146	52	5	0	0	0	0.053939	8	9236	9189;9236;9276;9327;9369;9418;9469;9528		61.602	30.026	1	21327000			11168	1628;6509	5559	5581	13530;13531;13532;13533;13534;13535;13536;13537	13531					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3301269412041	2	567.328619	1132.64269	0.5239	0.00029722	-0.66903	-0.00037956	-0.14513	-8.2339E-05	567.3279229984126	22.155	0.4316	23.771	23.61	24.041	1.6158					28	13	3	0	0	0	0.10473	2	9218	9218;9266		47.749	27.295	1	871840			11169	1628;6509	5559	5581	13538;13539	13538					0.08166941767581193
ILMEHIHKL	9	Unmodified	_ILMEHIHKL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	567.328619	1132.64269	0.68661	0.00038953	-0.67307	-0.00038185	0.013541	7.6825E-06	567.3281012779788	23.893	0.46284	24.136	23.949	24.412	0.24252	0.21898	-7.4923E-05	NaN	47.749	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319940			11170	1628;6509	5559	5581							0.08166941767581193
ILMESLNLNK	10	Unmodified	_ILMESLNLNK_					0	0	0			REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8291503787041	2	587.828649	1173.64274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.401	1	97.707	97.207	98.207	0.3062								0	0	0	0.52953	1	40973	40973		24.021	1.2843	1		+		11171	8451	5560	5582	13540	13540					0.06286896976916978
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(76)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3054382205009	2	509.304278	1016.594	2.1176	0.0010785	0.17633	8.9804E-05	2.2939	0.0011683	509.3044689689421	45.203	0.25211	45.203	45.059	45.312	0					20	7	3	0	0	0	0.040497	1	18906	18906		75.761	33.666	1	2849500			11172	1669	5561	5583	13541	13541		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(86)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3055602908134	2	509.304278	1016.594	2.1272	0.0010834	0.51037	0.00025993	2.6375	0.0013433	509.3045441131835	45.474	0.28193	45.474	45.312	45.593	0					21	8	3	0	0	0	0.031145	1	19002	19002		85.642	28.17	1	2727900			11173	1669	5561	5583	13542	13542		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(66)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3064758181572	2	509.304278	1016.594	1.9701	0.0010034	1.3355	0.00068018	3.3056	0.0016836	509.3051524485166	44.573	0.26564	44.899	44.749	45.014	0.32674					21	8	3	0	0	0	0.053939	1	18734	18734		66.457	24.362	1	2092700			11174	1669	5561	5583	13543	13543		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(66)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3062011599541	2	509.304278	1016.594	1.9669	0.0010018	0.93804	0.00047775	2.905	0.0014795	509.3050059615468	44.854	0.32863	45.181	45.014	45.343	0.32674					27	10	3	0	0	0	0.053939	1	18831	18831		66.457	24.362	1	2717100			11175	1669	5561	5583	13544	13544		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(96)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3053771853447	2	509.304278	1016.594	1.983	0.0010099	3.3909	0.001727	5.3739	0.002737	509.3047217043694	43.122	0.3114	44.476	44.279	44.59	1.3536					20	9	3	0	0	0	0.024001	2	18098	18049;18098		96.111	48.362	1	4066800			11176	1669	5561	5583	13545;13546	13546		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(120)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3058959841728	2	509.304278	1016.594	2.1557	0.0010979	1.2897	0.00065683	3.4453	0.0017547	509.304937603799	43.384	0.35712	44.738	44.59	44.947	1.3536					26	11	3	0	0	0	0.0049178	2	18221	18171;18221		122.18	54.098	1	4454700			11177	1669	5561	5583	13547;13548	13548		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(80)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3054077029228	2	509.304278	1016.594	1.9823	0.0010096	1.5737	0.00080147	3.556	0.0018111	509.3044886405561	42.475	0.25121	44.396	44.258	44.509	1.9211					16	7	3	0	0	0	0.036104	1	17799	17799		79.596	33.575	1	3413800			11178	1669	5561	5583	13549	13549		28			0.08637028407838443
ILMGVLKEV	9	Oxidation (M)	_ILM(Oxidation (M))GVLKEV_		ILM(1)GVLKEV		ILM(89)GVLKEV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3053161501884	2	509.304278	1016.594	2.0658	0.0010521	1.6672	0.00084912	3.733	0.0019012	509.3048686618222	42.748	0.30163	44.669	44.509	44.811	1.9211					27	9	4	0	0	0	0.02878	2	17946	17896;17946		89.401	43.38	1	4976700			11179	1669	5561	5583	13550;13551	13551		28			0.08637028407838443
ILMGVLKEV	9	Unmodified	_ILMGVLKEV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3074218630791	2	501.306821	1000.59909	1.8168	0.00091078	-1.2201	-0.00061164	0.59671	0.00029913	501.3054150749904	57.338	0.37126	57.338	57.192	57.564	0					28	15	3	0	0	0	0.053939	1	23967	23967		66.457	2.2204	1	4457200			11180	1669	5561	5584	13552	13552					0.09881332270447274
ILMGVLKEV	9	Unmodified	_ILMGVLKEV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3070861697197	2	501.306821	1000.59909	1.0225	0.0005126	-1.484	-0.00074393	-0.46145	-0.00023133	501.3060583111504	55.62	0.38786	57.03	56.822	57.21	1.4099					35	17	3	0	0	0	0.019486	1	23296	23296		99.755	6.9331	1	31717000			11181	1669	5561	5584	13553	13553					0.09881332270447274
ILMGVLKEV	9	Unmodified	_ILMGVLKEV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3061401247978	2	501.306821	1000.59909	0.10513	5.2702E-05	-0.63949	-0.00032058	-0.53436	-0.00026788	501.3064378851254	55.06	0.50879	57.028	56.695	57.203	1.9684					46	19	4	0	0	0	0.02878	1	23145	23145		89.401	18.267	1	23253000			11182	1669	5561	5584	13554	13554					0.09881332270447274
ILMKEQLML	9	Unmodified	_ILMKEQLML_					0	0	0		ENST00000490652.1_1_1:23664981-23665089:-|nuORF;ENST00000478691.5_1_1:23664326-23665089:-|nuORF	ENST00000490652.1_1_1:23664981-23665089:-|nuORF	ENST00000490652.1_1_1:23664981-23665089:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8195068240166	2	559.819238	1117.62392	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.851	1	55.172	54.672	55.672	0.32088								0	0	0	0.341	1	22970	22970		14.582	5.2343	1				11183	6806	5562	5585	13555	13555					0.06981644081497507
ILMPIPTPL	9	Unmodified	_ILMPIPTPL_					0	0	0		nc|ENSG00000206034|Q30KR1|DEFB109B	nc|ENSG00000206034|Q30KR1|DEFB109B	nc|ENSG00000206034|Q30KR1|DEFB109B	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2066528201103	3	332.205035	993.593275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.336	1	81.627	81.127	82.127	0.29056								0	0	0	0.42693	1	34003	34003		1.1933	0.12188	1				11184	7984	5563	5586	13556	13556					0.09622233758761922
ILMPIPTPL	9	Unmodified	_ILMPIPTPL_					0	0	0		nc|ENSG00000206034|Q30KR1|DEFB109B	nc|ENSG00000206034|Q30KR1|DEFB109B	nc|ENSG00000206034|Q30KR1|DEFB109B	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2075988650322	3	332.205035	993.593275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.053	1	92.244	91.744	92.744	0.19042								0	0	0	0.42693	1	38548	38548		1.1933	0.12188	1				11185	7984	5563	5586	13557	13557					0.09622233758761922
ILMPLSATPN	10	Unmodified	_ILMPLSATPN_					0	0	0			REV__ENSG00000124216|ENST00000244050|SNAI1	REV__ENSG00000124216|ENST00000244050|SNAI1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.3312866091728	2	528.791535	1055.56852	3.4038	0.0017999	-3.296	-0.0017429	0.10779	5.6996E-05	528.7895942619588	97.472	0.23806	97.778	97.685	97.923	0.3062					11	7	3	0	0	0	0.12438	1	41065	41065		16.942	1.0951	1	8636100	+		11186	9641	5564	5587	13558	13558					0.04295553885413028
ILNKWEML	8	Unmodified	_ILNKWEML_					0	0	0		CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB;ENST00000478573.6_1_1:227381485-227504745:-|nuORF;nc|ENSG00000143776|Q5VT25-3|CDC42BPA;nc|ENSG00000143776|Q5VT25-4|CDC42BPA;nc|ENSG00000143776|Q5VT25-5|CDC42BPA;nc|ENSG00000143776|Q5VT25|CDC42BPA;ENSG00000143776|ENST00000366766|CDC42BPA;nc|ENSG00000143776|Q5VT25-6|CDC42BPA	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7958862185478	2	523.788795	1045.56304	4.3383	0.0022724	0.68393	0.00035824	5.0222	0.0026306	523.7887486199362	90.464	0.41468	91.446	91.334	91.749	0.98157					16	12	2	0	0	0	0.88409	1	38121	38121		6.3541	0	1	1503000			11187	135	5565	5588	13559	13559					0.042078750935843345
ILNNLKAFL	9	Unmodified	_ILNNLKAFL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.7752563357353	2	523.32386	1044.63317	2.1836	0.0011427	2.2984	0.0012028	4.4821	0.0023456	523.3258304542549	63.118	0.15498	65.062	64.997	65.152	1.9444					6	4	2	0	0	0	0.08828	1	26499	26499		21.747	2.3076	1	765950			11188	2648	5566	5589	13560	13560					0.1126349675369056
ILNPEVVTV	9	Unmodified	_ILNPEVVTV_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;ENST00000459993.5_1_3:56657067-56667992:-|nuORF	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2921630740166	2	492.292225	982.569897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.979	1	55.382	54.882	55.882	1.4031								0	0	0	0.16797	1	22596	22596		28.487	8.0332	1				11189	3736	5567	5590	13561	13561					0.07791511245795846
ILNPEVVTV	9	Unmodified	_ILNPEVVTV_					0	0	0		nc|ENSG00000163946|Q9UK61-3|TASOR;nc|ENSG00000163946|Q9UK61-4|TASOR;ENSG00000163946|ENST00000683822|TASOR;nc|ENSG00000163946|Q9UK61-2|TASOR;ENST00000459993.5_1_3:56657067-56667992:-|nuORF	nc|ENSG00000163946|Q9UK61-3|TASOR	nc|ENSG00000163946|Q9UK61-3|TASOR	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2922241091728	2	492.292225	982.569897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.476	1	55.445	54.945	55.945	1.9697								0	0	0	0.26021	1	22405	22405		21.747	4.8044	1				11190	3736	5567	5590	13562	13562					0.07791511245795846
ILNPYNLFL	9	Unmodified	_ILNPYNLFL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8192626833916	2	553.815867	1105.61718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.779	1	94.651	94.151	95.151	0.87176								0	0	0	0.049731	1	39462	39462		60.39	20.432	1				11191	1998	5568	5591	13563	13563					0.06859790516796238
ILNPYNLFL	9	Unmodified	_ILNPYNLFL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8153564333916	2	553.815867	1105.61718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.309	1	94.586	94.086	95.086	1.277								0	0	0	0.046561	1	39262	39262		53.576	13.618	1				11192	1998	5568	5591	13564	13564					0.06859790516796238
ILNVDGLIGV	10	Unmodified	_ILNVDGLIGV_					0	0	0		ENST00000588779.1_1_17:40024065-40026676:-|nuORF;nc|ENSG00000131473|P53396-3|ACLY;nc|ENSG00000131473|P53396-2|ACLY;ENSG00000131473|ENST00000352035|ACLY	ENST00000588779.1_1_17:40024065-40026676:-|nuORF	ENST00000588779.1_1_17:40024065-40026676:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8070251345634	2	506.8055	1011.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.078	1	80.078	79.578	80.578	0								0	0	0	0.20287	1	33346	33346		37.974	17.52	1				11193	2495	5569	5592	13565	13565					0.0911120013714708
ILPAIVIIII	10	Unmodified	_ILPAIVIIII_					0	0	0		tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3852416872978	2	539.385929	1076.7573	1.9492	0.0010514	-0.13982	-7.5419E-05	1.8094	0.00097597	539.3862208334567	82.024	0.18409	82.024	81.915	82.099	0					9	5	2	0	0	0	0.79742	1	34179	34179		12.532	0	1	682160			11194	16513	5570	5593	13566	13566					0.22199574521164323
ILPEWLYHS	9	Unmodified	_ILPEWLYHS_					0	0	0			REV__nc|ENSG00000146955|A4D1S5-2|RAB19	REV__nc|ENSG00000146955|A4D1S5-2|RAB19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.3052245974541	2	579.303124	1156.5917	2.4662	0.0014287	-2.1551	-0.0012485	0.31109	0.00018021	579.3018705864921	76.778	0.40516	78.072	77.857	78.262	1.2938					33	12	3	0	0	0	0.19075	1	32197	32197		34.102	8.7031	1	4617200	+		11195	14456	5571	5594	13567	13567					0.019663159943547726
ILPFPCNGY	9	Unmodified	_ILPFPCNGY_					0	0	0			REV__tr|A0A7D6ZY26|A0A7D6ZY26_9CLOTSulfateadenylyltransferasesubunit2OS=ClostridiumintestinaleOX=36845GN=HZF06_00565PE=3SV=1	REV__tr|A0A7D6ZY26|A0A7D6ZY26_9CLOTSulfateadenylyltransferasesubunit2OS=ClostridiumintestinaleOX=36845GN=HZF06_00565PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2508422732353	2	512.252046	1022.48954	2.1686	0.0011109	-2.8768	-0.0014736	-0.70822	-0.00036279	512.2504784138993	80.882	0.37361	80.882	80.666	81.04	0					24	11	3	0	0	0	0.54523	1	33693	33693		13.508	6.2187	1	2489000	+		11196	15775	5572	5595	13568	13568					-0.020806733488939244
ILPFPCNGY	9	Unmodified	_ILPFPCNGY_					0	0	0			REV__tr|A0A7D6ZY26|A0A7D6ZY26_9CLOTSulfateadenylyltransferasesubunit2OS=ClostridiumintestinaleOX=36845GN=HZF06_00565PE=3SV=1	REV__tr|A0A7D6ZY26|A0A7D6ZY26_9CLOTSulfateadenylyltransferasesubunit2OS=ClostridiumintestinaleOX=36845GN=HZF06_00565PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	512.252046	1022.48954	2.4919	0.0012765	-7.1971	-0.0036867	-4.7052	-0.0024103	512.2500364301931	78.941	0.37096	80.676	80.475	80.846	1.735	-0.056705	-0.0042161	NaN	13.508	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2138900	+		11197	15775	5572	5595							-0.020806733488939244
ILPGSLFRF	9	Unmodified	_ILPGSLFRF_					0	0	0		nc|ENSG00000136536|Q9H992-2|MARCHF7;ENSG00000136536|ENST00000409175|MARCHF7	nc|ENSG00000136536|Q9H992-2|MARCHF7	nc|ENSG00000136536|Q9H992-2|MARCHF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3119994997978	2	525.310752	1048.60695	1.898	0.00099702	0.27772	0.00014589	2.1757	0.0011429	525.3109375663714	71.56	1.2621	72.901	72.482	73.744	1.3415					134	40	4	0	0	0	0.033504	7	30059	29971;30017;30059;30110;30162;30200;30239		81.89	34.142	1	13432000			11198	2728	5573	5596	13569;13570;13571;13572;13573;13574;13575	13571					0.08459227582216045
ILPGSLFRF	9	Unmodified	_ILPGSLFRF_					0	0	0		nc|ENSG00000136536|Q9H992-2|MARCHF7;ENSG00000136536|ENST00000409175|MARCHF7	nc|ENSG00000136536|Q9H992-2|MARCHF7	nc|ENSG00000136536|Q9H992-2|MARCHF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3126708865166	2	525.310752	1048.60695	1.427	0.0007496	0.46456	0.00024404	1.8915	0.00099364	525.3111355867479	71.023	1.3876	72.847	72.547	73.935	1.8239					141	44	4	0	0	0	0.044893	7	29808	29761;29808;29861;29902;29953;29991;30032		71.922	31.965	1	13147000			11199	2728	5573	5596	13576;13577;13578;13579;13580;13581;13582	13577					0.08459227582216045
ILPHHTWSG	9	Unmodified	_ILPHHTWSG_					0	0	0		ENST00000609274.5_2_19:15562469-15562604:-|nuORF	ENST00000609274.5_2_19:15562469-15562604:-|nuORF	ENST00000609274.5_2_19:15562469-15562604:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.5233947634697	3	349.850531	1046.52976	0.74274	0.00025985	0.37277	0.00013041	1.1155	0.00039026	349.85185084077057	71.458	0.24709	72.799	72.689	72.936	1.3415					9	7	2	0	0	0	0.11837	1	30015	30015		4.897	0	1	217940			11200	7573	5574	5597	13583	13583					0.008360093658893675
ILPIKFPHL	9	Unmodified	_ILPIKFPHL_					0	0	0		ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B;ENST00000588059.5_1_18:61064418-61077532:-|nuORF;ENST00000589604.5_1_18:61064221-61077532:-|nuORF;ENSG00000132612|ENST00000254950|VPS4A	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.8996154665947	3	359.898822	1076.67464	1.2758	0.00045917	2.2715	0.00081753	3.5474	0.0012767	359.8991419535928	59.895	0.76755	61.314	60.769	61.536	1.4196					42	24	2	0	0	0	0.48482	1	25140	25140		16.149	3.9084	1	1869300			11201	2074	5575	5598	13584	13584					0.13936677513015638
ILPIKFPHL	9	Unmodified	_ILPIKFPHL_					0	0	0		ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B;ENST00000588059.5_1_18:61064418-61077532:-|nuORF;ENST00000589604.5_1_18:61064221-61077532:-|nuORF;ENSG00000132612|ENST00000254950|VPS4A	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	359.898822	1076.67464	2.262	0.00081408	0.82252	0.00029602	3.0845	0.0011101	359.8986650369345	59.269	0.61354	61.238	60.908	61.522	1.969	-0.038021	-0.00067644	NaN	16.149	38	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1341100			11202	2074	5575	5598							0.13936677513015638
ILPKELQTW	9	Unmodified	_ILPKELQTW_					0	0	0		nc|ENSG00000172466|P17028-2|ZNF24;ENSG00000172466|ENST00000261332|ZNF24	nc|ENSG00000172466|P17028-2|ZNF24	nc|ENSG00000172466|P17028-2|ZNF24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3282348513603	2	564.326599	1126.63865	2.4417	0.0013779	0.1426	8.0474E-05	2.5843	0.0014584	564.3263537851044	47.538	0.66508	48.92	48.663	49.328	1.3825					50	20	4	0	0	0	0.087723	2	19910	19860;19910		53.404	13.165	1	5538700			11203	4238	5576	5599	13585;13586	13586					0.08039175545513899
ILPKELQTW	9	Unmodified	_ILPKELQTW_					0	0	0		nc|ENSG00000172466|P17028-2|ZNF24;ENSG00000172466|ENST00000261332|ZNF24	nc|ENSG00000172466|P17028-2|ZNF24	nc|ENSG00000172466|P17028-2|ZNF24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3282958865166	2	564.326599	1126.63865	2.3601	0.0013319	-0.15484	-8.7383E-05	2.2053	0.0012445	564.32587188972	47.092	0.56658	49.068	48.808	49.374	1.976					44	17	4	0	0	0	0.077188	2	19732	19681;19732		57.249	23.147	1	5838200			11204	4238	5576	5599	13587;13588	13588					0.08039175545513899
ILPKPWRK	8	Unmodified	_ILPKPWRK_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-4|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5604125857353	3	346.5588	1036.65457	1.4919	0.00051704	0.98809	0.00034243	2.48	0.00085947	346.55916651783355	66.673	0.86222	66.998	66.527	67.389	0.32449					47	19	3	0	0	0	0.89185	1	27953	27953		0.45834	0.18932	1	3690800			11205	2055	5577	5600	13589	13589					0.13770926573056386
ILPLLLTV	8	Unmodified	_ILPLLLTV_					0	0	0		ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.3057739138603	2	441.307147	880.599741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.805	1	80.805	80.305	81.305	0								0	0	0	1.0178	1	33647	33647		2.8892	0	1				11206	6255	5578	5601	13590	13590					0.15466494981785672
ILPLLLTV	8	Unmodified	_ILPLLLTV_					0	0	0		ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	ENST00000392185.7_2_6:158327242-158330754:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	441.3062621951103	2	441.307147	880.599741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.341	1	80.632	80.132	81.132	0.29056								0	0	0	1.0178	1	33586	33586		2.8892	0	1				11207	6255	5578	5601	13591	13591					0.15466494981785672
ILPLSLLKNL	10	Unmodified	_ILPLSLLKNL_					0	0	0		SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant;ENSG00000139209|ENST00000266579|SLC38A4	SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant	SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	562.7852661013603	2	562.376092	1122.73763	1.2048	0.00067754	-0.36762	-0.00020674	0.83716	0.0004708	562.877403886493	53.697	0.24567	55.098	54.948	55.194	1.4005					16	9	2	0	0	0	0.12461	1	22491	22491		6.2058	1.4498	1	4191900			11208	2869	5579	5602	13592	13592					0.1811719851041289
ILPLSLLKNL	10	Unmodified	_ILPLSLLKNL_					0	0	0		SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant;ENSG00000139209|ENST00000266579|SLC38A4	SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant	SLC38A4|p.I247Tfs*33|1|0.17|ENSG00000139209|chr12:46778754-46778755|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3764526247978	2	562.376092	1122.73763	0.75132	0.00042253	-1.234	-0.00069398	-0.48269	-0.00027145	562.3752972044296	53.125	0.19732	55.094	54.976	55.173	1.9697					17	11	2	0	0	0	0.80568	1	22264	22264		11.64	0.81637	1	2909800			11209	2869	5579	5602	13593	13593					0.1811719851041289
ILPPQLALF	9	Unmodified	_ILPPQLALF_					0	0	0		AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant;AHR|p.Q513Hfs*9|1|0.06|ENSG00000106546|chr7:17339363-17339364|-/TTTACGAAAACGAAATACG|frameshift_variant;AHR|p.S522Yfs*21|1|0.06|ENSG00000106546|chr7:17339390-17339390|C/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant	AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3216125369072	2	506.315503	1010.61645	6.1271	0.0031023	-0.14989	-7.5891E-05	5.9772	0.0030264	506.3160685573961	88.774	0.61292	89.83	89.562	90.175	1.0562					43	18	3	0	0	0	0.19075	3	37394	37394;37446;37496		34.102	8.7031	1	1361200			11210	31	5580	5603	13594;13595;13596	13594					0.1115699586774781
ILPREFYAW	9	Unmodified	_ILPREFYAW_					0	0	0		ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant;ENST00000466948.1_1_7:99217289-99228306:+|nuORF;ENST00000481424.5_1_7:99217223-99217685:+|nuORF;nc|ENSG00000197037|Q6NSZ9-4|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25;ENSG00000197037|ENST00000394152|ZSCAN25	ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant	ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8213378787041	2	597.818941	1193.62333	3.069	0.0018347	-0.25623	-0.00015318	2.8127	0.0016815	597.8192301011145	61.341	0.3052	62.759	62.683	62.988	1.4177					20	9	3	0	0	0	0.21592	1	25736	25736		31.268	12.011	1	2196800			11211	4977	5581	5604	13597	13597					0.03426308748316842
ILPREFYAW	9	Unmodified	_ILPREFYAW_					0	0	0		ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant;ENST00000466948.1_1_7:99217289-99228306:+|nuORF;ENST00000481424.5_1_7:99217223-99217685:+|nuORF;nc|ENSG00000197037|Q6NSZ9-4|ZSCAN25;nc|ENSG00000197037|Q6NSZ9-2|ZSCAN25;ENSG00000197037|ENST00000394152|ZSCAN25	ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant	ZSCAN25|p.L91R|1|0.07|ENSG00000197037|chr7:99619878-99619878|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8202392458916	2	597.818941	1193.62333	3.0169	0.0018035	-0.50074	-0.00029935	2.5161	0.0015042	597.8184572813963	60.814	0.36755	62.78	62.637	63.004	1.9653					25	11	3	0	0	0	0.28372	1	25511	25511		26.268	7.0112	1	1822200			11212	4977	5581	5604	13598	13598					0.03426308748316842
ILPVFFSN	8	Unmodified	_ILPVFFSN_					0	0	0		ENST00000438257.8_2_14:80669457-80677836:-|nuORF;ENSG00000211448|ENST00000438257|DIO2;nc|ENSG00000211448|Q92813-2|DIO2	ENST00000438257.8_2_14:80669457-80677836:-|nuORF	ENST00000438257.8_2_14:80669457-80677836:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.7644531130791	2	468.763104	935.511654	1.2046	0.00056465	-1.6546	-0.00077563	-0.45008	-0.00021098	468.7627285874011	54.845	0.20872	56.814	56.751	56.959	1.9684					14	6	3	0	0	0	0.83518	1	22993	22993		18.135	2.3668	1	2260600			11213	5202	5582	5605	13599	13599					0.04131874391191559
ILPVRPLRF	9	Unmodified	_ILPVRPLRF_					0	0	0		ENST00000489951.1_1_7:149427187-149427675:+|nuORF;nc|ENSG00000133619|A5PL33-3|KRBA1;nc|ENSG00000133619|A5PL33-2|KRBA1;nc|ENSG00000133619|A5PL33|KRBA1;ENSG00000133619|ENST00000496259|KRBA1	ENST00000489951.1_1_7:149427187-149427675:+|nuORF	ENST00000489951.1_1_7:149427187-149427675:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1009704470634	3	370.909721	1109.70733	1.7139	0.00063569	-1.4271	-0.00052931	0.28681	0.00010638	370.90905479036184	43.421	0.26189	45.364	45.165	45.427	1.9438					15	8	2	0	0	0	0.11891	1	18204	18204		2.9952	0	1	1747800			11214	2576	5583	5606	13600	13600					0.15686884635897513
ILPYLHCF	8	Unmodified	_ILPYLHCF_					0	0	0		tr|A0A553SPP5|A0A553SPP5_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_26830PE=4SV=1	tr|A0A553SPP5|A0A553SPP5_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_26830PE=4SV=1	tr|A0A553SPP5|A0A553SPP5_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_26830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2660705447197	2	503.264956	1004.51536	3.0535	0.0015367	-1.7952	-0.00090344	1.2584	0.0006333	503.2638791658523	92.714	0.41783	93.991	93.715	94.133	1.277					20	12	2	0	0	0	0.88409	1	39014	39014		6.3541	0	1	591440			11215	16478	5584	5607	13601	13601					0.013282208933787842
ILPYYQEF	8	Unmodified	_ILPYYQEF_					0	0	0			REV__tr|A0A553SHW7|A0A553SHW7_NIACIProlineiminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_13735PE=3SV=1	REV__tr|A0A553SHW7|A0A553SHW7_NIACIProlineiminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_13735PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1635009646416	2	536.771126	1071.5277	3.5548	0.0019081	1.2436	0.00066752	4.7984	0.0025756	537.2726776790322	91.301	0.4934	92.667	92.374	92.867	1.366					28	15	2	0	0	0	2.3239	1	38519	38519		9.3474	4.1168	1	1374300	+		11216	14822	5585	5608	13602	13602					-0.0052046416258235695
ILQAFPDM	8	Unmodified	_ILQAFPDM_					0	0	0		nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000110693|P35712-2|SOX6;nc|ENSG00000110693|P35712-3|SOX6;ENSG00000110693|ENST00000683767|SOX6;nc|ENSG00000134532|P35711-3|SOX5;nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-5|SOX5;ENSG00000134532|ENST00000451604|SOX5;ENSG00000143842|ENST00000367204|SOX13;ENST00000272193.10_1_1:204085443-204095259:+|nuORF	nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000134532|P35711-4|SOX5;ENSG00000143842|ENST00000367204|SOX13	nc|ENSG00000134532|P35711-4|SOX5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7397643923759	2	467.738771	933.462989	2.2259	0.0010412	-0.046803	-2.1892E-05	2.1791	0.0010193	467.73850724287405	50.288	3.6213	51.679	49.212	52.834	1.3911					248	116	3	0	0	0	0.88409	1	21308	21308		6.3541	0	1	3576900			11217	1711;2621;3054	5586	5609	13603	13603					-0.006403622402217479
ILQAFPDM	8	Unmodified	_ILQAFPDM_					0	0	0		nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000110693|P35712-2|SOX6;nc|ENSG00000110693|P35712-3|SOX6;ENSG00000110693|ENST00000683767|SOX6;nc|ENSG00000134532|P35711-3|SOX5;nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-5|SOX5;ENSG00000134532|ENST00000451604|SOX5;ENSG00000143842|ENST00000367204|SOX13;ENST00000272193.10_1_1:204085443-204095259:+|nuORF	nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000134532|P35711-4|SOX5;ENSG00000143842|ENST00000367204|SOX13	nc|ENSG00000134532|P35711-4|SOX5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7396728396416	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.87803	1	20900	20900		10.183	3.8293	1	3535400			11218	1711;2621;3054	5586	5609	13604	13604					-0.006403622402217479
ILQCFYFF	8	Unmodified	_ILQCFYFF_					0	0	0		tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.7653076052666	2	540.764789	1079.51502	1.1315	0.00061187	0.17667	9.5538E-05	1.3082	0.0007074	540.765309741653	30.54	0.82639	30.54	30.223	31.049	0					72	26	4	0	0	0	0.87935	3	12737	12737;12843;12892		9.3474	0.75416	1	2161900			11219	16394	5587	5610	13605;13606;13607	13605					-0.021551988264718602
ILQCFYFF	8	Unmodified	_ILQCFYFF_					0	0	0		tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.7654907107353	2	540.764789	1079.51502	1.1575	0.00062591	0.23982	0.00012969	1.3973	0.0007556	540.7652939550752	30.24	0.67522	30.526	30.235	30.91	0.2859					52	22	3	0	0	0	0.87935	3	12600	12600;12649;12817		9.3474	0.75416	1	2389700			11220	16394	5587	5610	13608;13609;13610	13608					-0.021551988264718602
ILQCFYFF	8	Unmodified	_ILQCFYFF_					0	0	0		tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7656127810478	2	540.764789	1079.51502	1.0004	0.00054097	1.5063	0.00081457	2.5067	0.0013555	540.7657205295874	29.065	0.57373	30.347	30.131	30.705	1.2825					26	18	2	0	0	0	0.87935	1	12218	12218		9.3474	0.75416	1	938230			11221	16394	5587	5610	13611	13611					-0.021551988264718602
ILQCFYFF	8	Unmodified	_ILQCFYFF_					0	0	0		tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	tr|A0A553SMU2|A0A553SMU2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7653686404228	2	540.764789	1079.51502	0.83045	0.00044908	0.97579	0.00052767	1.8062	0.00097675	540.765683454048	28.545	0.63145	30.32	30.092	30.724	1.7754					32	20	2	0	0	0	0.88587	1	12029	12029		5.2307	0.47466	1	517580			11222	16394	5587	5610	13612	13612					-0.021551988264718602
ILQDGRIFI	9	Unmodified	_ILQDGRIFI_					0	0	0		ENSG00000125835|ENST00000381342|SNRPB;nc|ENSG00000125835|P14678|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000128739|P63162-2|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.8203002810478	2	537.818941	1073.62333	1.7945	0.0009651	0.16839	9.0562E-05	1.9629	0.0010557	537.8192906780914	54.931	0.28408	54.931	54.725	55.009	0					21	8	3	0	0	0	0.099302	1	22870	22870		49.554	11.379	1	1553100			11223	2282	5588	5611	13613	13613					0.08946308748318188
ILQDGRIFI	9	Unmodified	_ILQDGRIFI_					0	0	0		ENSG00000125835|ENST00000381342|SNRPB;nc|ENSG00000125835|P14678|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000128739|P63162-2|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.8209106326103	2	537.818941	1073.62333	1.9784	0.001064	1.125	0.00060504	3.1034	0.001669	537.8196510880542	54.236	0.31495	54.557	54.411	54.726	0.32088					21	9	3	0	0	0	0.070055	1	22720	22720		60.074	7.8056	1	2000000			11224	2282	5588	5611	13614	13614					0.08946308748318188
ILQDGRIFI	9	Unmodified	_ILQDGRIFI_					0	0	0		ENSG00000125835|ENST00000381342|SNRPB;nc|ENSG00000125835|P14678|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000128739|P63162-2|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.8209716677666	2	537.818941	1073.62333	0.87286	0.00046944	3.0178	0.001623	3.8906	0.0020924	537.8200826532768	53.026	0.3534	54.426	54.216	54.57	1.4005					18	10	2	0	0	0	0.043696	1	22176	22176		72.968	7.7329	1	4686300			11225	2282	5588	5611	13615	13615					0.08946308748318188
ILQDGRIFI	9	Unmodified	_ILQDGRIFI_					0	0	0		ENSG00000125835|ENST00000381342|SNRPB;nc|ENSG00000125835|P14678|SNRPB;ENSG00000128739|ENST00000390687|SNRPN;nc|ENSG00000128739|P63162-2|SNRPN;nc|ENSG00000125835|P14678-3|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	ENSG00000125835|ENST00000381342|SNRPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8211547732353	2	537.818941	1073.62333	1.338	0.00071961	1.3508	0.0007265	2.6888	0.0014461	537.8193248045367	52.458	0.38108	54.43	54.228	54.61	1.9722					27	11	3	0	0	0	0.12251	1	21939	21939		41.84	11.203	1	4152800			11226	2282	5588	5611	13616	13616					0.08946308748318188
ILQDPHPK	8	Unmodified	_ILQDPHPK_					0	0	0		ENST00000249071.10_2_22:37621919-37622054:-|nuORF	ENST00000249071.10_2_22:37621919-37622054:-|nuORF	ENST00000249071.10_2_22:37621919-37622054:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.1751586794853	3	316.515148	946.523616	-1.5106	-0.00047813	0.81564	0.00025816	-0.69496	-0.00021996	316.51553152002015	11.986	0.15613	12.68	12.602	12.759	0.69396					6	4	2	0	0	0	2.3239	1	5010	5010		0	0	1	293050			11227	5580	5589	5612	13617	13617					0.04821491134373446
ILQDPHPK	8	Unmodified	_ILQDPHPK_					0	0	0		ENST00000249071.10_2_22:37621919-37622054:-|nuORF	ENST00000249071.10_2_22:37621919-37622054:-|nuORF	ENST00000249071.10_2_22:37621919-37622054:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	316.515148	946.523616	-0.51274	-0.00016229	-1.4087	-0.00044586	-1.9214	-0.00060815	316.51463714430514	12.425	0.12144	12.514	12.433	12.555	0.089381	-0.082923	-0.00090341	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	468170			11228	5580	5589	5612							0.04821491134373446
ILQELRPL	8	Unmodified	_ILQELRPL_					0	0	0			REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.3094970583916	2	491.30821	980.601866	2.9873	0.0014677	0.074602	3.6653E-05	3.0619	0.0015043	491.308491355421	62.896	0.33556	64.309	64.103	64.439	1.4134					18	10	2	0	0	0	0.76103	1	26400	26400		24.674	0.65332	1	1286500	+		11229	13292	5590	5613	13618	13618					0.11078923719594513
ILQELRPL	8	Unmodified	_ILQELRPL_					0	0	0			REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3093139529228	2	491.30821	980.601866	3.2461	0.0015949	-1.2947	-0.00063609	1.9515	0.00095877	491.30758831047405	62.355	0.35776	64.312	64.061	64.419	1.9571					20	11	2	0	0	0	0.76103	1	26165	26165		24.674	0.65332	1	1122500	+		11230	13292	5590	5613	13619	13619					0.11078923719594513
ILQELRPL	8	Unmodified	_ILQELRPL_					0	0	0			REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.30821	980.601866	2.9873	0.0014677	0.074602	3.6653E-05	3.0619	0.0015043	491.308491355421	62.896	0.33556	64.309	64.103	64.439	1.4134	-0.0014896	0.00064696	NaN	24.674	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1286500	+		11231	13292	5590	5613							0.11078923719594513
ILQELRPL	8	Unmodified	_ILQELRPL_					0	0	0			REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	REV__ENST00000472011.5_1_1:235582749-235612074:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.30821	980.601866	3.2461	0.0015949	-1.2947	-0.00063609	1.9515	0.00095877	491.30758831047405	62.355	0.35776	64.312	64.061	64.419	1.9571	0.0014896	-0.00069853	NaN	24.674	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1122500	+		11232	13292	5590	5613							0.11078923719594513
ILQERKMF	8	Unmodified	_ILQERKMF_					0	0	0		tr|A0A553SLK5|A0A553SLK5_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20795PE=4SV=1	tr|A0A553SLK5|A0A553SLK5_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20795PE=4SV=1	tr|A0A553SLK5|A0A553SLK5_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7974120974541	2	532.799694	1063.58484	2.6477	0.0014107	-2.7948	-0.0014891	-0.14705	-7.8346E-05	532.7976598211809	47.133	0.8125	49.109	48.592	49.405	1.976					54	25	3	0	0	0	0.86113	1	19802	19802		15.847	1.2655	1	6316900			11233	16336	5591	5614	13620	13620					0.05558679842147285
ILQESIINI	9	Unmodified	_ILQESIINI_					0	0	0		ENST00000276079.12_1_X:70504298-70511637:+|nuORF	ENST00000276079.12_1_X:70504298-70511637:+|nuORF	ENST00000276079.12_1_X:70504298-70511637:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8105956912041	2	521.810782	1041.60701	2.1281	0.0011105	0.92063	0.00048039	3.0487	0.0015908	521.8108638331098	78.397	0.34122	80.132	79.948	80.289	1.735					22	10	3	0	0	0	0.049839	1	32872	32872		68.081	5.508	1	1769800			11234	5689	5592	5615	13621	13621					0.0878718279154782
ILQHDFLF	8	Unmodified	_ILQHDFLF_					0	0	0			REV__ENST00000527365.1_1_2:131798892-131801189:+|nuORF	REV__ENST00000527365.1_1_2:131798892-131801189:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	344.8906432986259	3	344.855282	1031.54402	1.351	0.00046589	-1.5662	-0.00054012	-0.21525	-7.423E-05	344.85471247092084	42.865	0.74031	43.185	43.123	43.863	0.32058					31	23	2	0	0	0	2.3239	1	18265	18265		4.3292	0	1	1382000	+		11235	9967	5593	5616	13622	13622					0.02950661794170628
ILQHDFLF	8	Unmodified	_ILQHDFLF_					0	0	0			REV__ENST00000527365.1_1_2:131798892-131801189:+|nuORF	REV__ENST00000527365.1_1_2:131798892-131801189:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	344.8907653689384	3	344.855282	1031.54402	1.3466	0.0004644	1.419	0.00048935	2.7656	0.00095375	344.85587267048913	43.896	0.93497	44.22	43.547	44.482	0.32388					37	29	2	0	0	0	2.3239	1	18302	18302		4.3292	1.334	1	547170	+		11236	9967	5593	5616	13623	13623					0.02950661794170628
ILQIFLQSI	9	Unmodified	_ILQIFLQSI_					0	0	0			REV__sp|P16798|UL92_HCMVAProteinUL92OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL92PE=3SV=1	REV__sp|P16798|UL92_HCMVAProteinUL92OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL92PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.8339721560478	2	537.831517	1073.64848	3.2923	0.0017707	0.77774	0.00041829	4.07	0.002189	537.8320917372747	60.976	1.2393	62.396	61.507	62.746	1.4196					63	39	2	0	0	0	0.091139	1	25605	25605		52.268	3.9225	1	873300	+		11237	14638	5594	5617	13624	13624					0.11460363550895636
ILQIFLQSI	9	Unmodified	_ILQIFLQSI_					0	0	0			REV__sp|P16798|UL92_HCMVAProteinUL92OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL92PE=3SV=1	REV__sp|P16798|UL92_HCMVAProteinUL92OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL92PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	537.831517	1073.64848	3.2923	0.0017707	0.77774	0.00041829	4.07	0.002189	537.8320917372747	60.976	1.2393	62.396	61.507	62.746	1.4196	-0.014287	6.9454E-05	NaN	52.268	63	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	873300	+		11238	14638	5594	5617							0.11460363550895636
ILQKQEMPN	9	Unmodified	_ILQKQEMPN_					0	0	0		nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;ENSG00000103494|ENST00000647211|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2186767458916	2	550.792066	1099.56958	1.55	0.00085371	0.59976	0.00033034	2.1497	0.0011841	550.7926917004027	64.422	0.48267	64.422	64.174	64.657	0					27	14	2	0	0	0	0.11645	1	26896	26896		2.0598	0.40713	1	648130			11239	7845	5595	5618	13625	13625					0.023777682543141054
ILQKQEMPN	9	Unmodified	_ILQKQEMPN_					0	0	0		nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L;ENSG00000103494|ENST00000647211|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2187988162041	2	550.792066	1099.56958	1.8778	0.0010343	1.6443	0.00090566	3.5221	0.0019399	550.7928723507985	63.902	0.50526	64.231	64.056	64.562	0.32899					25	15	2	0	0	0	0.11812	1	26797	26797		4.756	2.9118	1	600450			11240	7845	5595	5618	13626	13626					0.023777682543141054
ILQLVKPNI	9	Unmodified	_ILQLVKPNI_					0	0	0			REV__nc|ENSG00000174527|Q8N1T3-2|MYO1H	REV__nc|ENSG00000174527|Q8N1T3-2|MYO1H	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.6848632693291	2	519.33951	1036.66447	2.6923	0.0013982	0.88631	0.0004603	3.5786	0.0018585	519.3401912083345	63.388	0.27305	64.801	64.691	64.965	1.4134					14	8	2	0	0	0	0.084274	1	26646	26646		16.942	1.0951	1	912230	+		11241	11126	5596	5619	13627	13627					0.14760069787803332
ILQTLIQRV	9	Unmodified	_ILQTLIQRV_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3481323122978	2	542.347866	1082.68118	2.4262	0.0013158	1.0967	0.00059481	3.5229	0.0019106	542.34857021004	47.533	0.25838	48.916	48.759	49.017	1.3825					11	7	2	0	0	0	0.20244	1	19893	19893		32.786	11.039	1	357530			11242	3060	5597	5620	13628	13628					0.14314570673764138
ILQTLIQRV	9	Unmodified	_ILQTLIQRV_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3495971560478	2	542.347866	1082.68118	2.3401	0.0012691	1.3966	0.00075745	3.7367	0.0020266	542.3489032779772	47.062	0.25514	49.038	48.87	49.125	1.976					10	7	2	0	0	0	0.15456	1	19710	19710		38.176	16.639	1	406290			11243	3060	5597	5620	13629	13629					0.14314570673764138
ILRENFRRHI	10	Unmodified	_ILRENFRRHI_					0	0	0		nc|ENSG00000146426|Q8IVF5-3|TIAM2;nc|ENSG00000146426|Q8IVF5-4|TIAM2;TIAM2|p.L1515Yfs*5|1|0.15|ENSG00000146426|chr6:155256558-155256559|-/A|frameshift_variant;ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2	nc|ENSG00000146426|Q8IVF5-3|TIAM2	nc|ENSG00000146426|Q8IVF5-3|TIAM2	MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3997070193291	2	677.396744	1352.77894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.96	1	86.119	85.619	86.619	1.159								0	0	0	0.66166	1	35651	35651		1.6526	0	1				11244	3154	5598	5621	13630	13630					0.11665772322453449
ILRIGAPVL	9	Unmodified	_ILRIGAPVL_					0	0	0			REV__chr17:81717861-81719976|269|19.72|0.57|5.11|+|0|SLC25A10,SLC25A10|1	REV__chr17:81717861-81719976|269|19.72|0.57|5.11|+|0|SLC25A10,SLC25A10|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.1960632205009	3	317.883172	950.627687	-2.4479	-0.00077814	-1.1205	-0.00035618	-3.5684	-0.0011343	317.88293019447934	36.185	0.052803	36.185	36.16	36.212	0					7	4	2	0	0	0	0.11891	1	15182	15182		1.1933	0	1	5856700	+		11245	8280	5599	5622	13631	13631					0.15039817961883273
ILRKEVII	8	Unmodified	_ILRKEVII_					0	0	0		ENST00000578975.1_1_19:40747718-40748063:-|nuORF;ENST00000487537.2_1_19:40747718-40761168:-|nuORF;ENST00000537834.5_1_19:40745726-40771198:-|nuORF;nc|ENSG00000105221|P31751-2|AKT2;ENST00000391844.8_1_19:40739781-40791100:-|nuORF;ENSG00000105221|ENST00000392038|AKT2	ENST00000578975.1_1_19:40747718-40748063:-|nuORF	ENST00000578975.1_1_19:40747718-40748063:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3351318240166	2	492.334227	982.653902	2.3712	0.0011674	-1.1936	-0.00058764	1.1776	0.00057977	492.33330499356515	71.605	0.34782	71.928	71.784	72.132	0.32359					19	10	2	0	0	0	0.79422	1	29962	29962		21.747	0	1	992520			11246	1503	5600	5623	13632	13632					0.1618808713337785
ILRKEVPPQ	9	Unmodified	_ILRKEVPPQ_					0	0	0			REV__tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	REV__tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	539.7939941287041	2	540.332216	1078.64988	3.0786	0.0016635	-1.9182	-0.0010365	1.1604	0.00062701	540.3314386875089	70.541	0.38594	71.895	71.616	72.002	1.3536					20	11	2	0	0	0	0.11463	1	29549	29549		4.3292	1.0479	1	1210900	+		11247	14866	5601	5624	13633	13633					0.11369997639667417
ILRLVIQKMTE	11	Unmodified	_ILRLVIQKMTE_					0	0	0		nc|ENSG00000155052|Q8WYK1|CNTNAP5;ENSG00000155052|ENST00000682447|CNTNAP5	nc|ENSG00000155052|Q8WYK1|CNTNAP5	nc|ENSG00000155052|Q8WYK1|CNTNAP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4114868044853	2	672.407598	1342.80064	1.0593	0.00071226	4.1933	0.0028196	5.2526	0.0035319	672.4106597584806	80.086	1.1126	81.803	80.735	81.848	1.7167					43	35	2	0	0	0	1.0362	1	33440	33440		1.3295	0	1	1886500			11248	3405	5602	5625	13634	13634					0.14295396236138913
ILRYVPSI	8	Unmodified	_ILRYVPSI_					0	0	0		L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|226|2|anti-sense;L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|101|2|anti-sense;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|267|2|anti-sense;L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|190|3|anti-sense;L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|145|2|anti-sense;chr5:124062510-124213455|90|11.21|0.0|12.03|-|1|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|35;chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|39;L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|263|2|anti-sense;L1PA8_dup7672|chr19:21549449-21550650:-|1.0893067253068611|0.363832208290546|1.58|386.0|37|1|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	960.5838500857353	1	960.587679	959.580402	1.7073	0.00164	3.4434	0.0033077	5.1508	0.0049478	960.5908157294384	79.025	0.45103	79.025	78.724	79.175	0					32	14	3	0	0	0	0.87106	1	32828	32828		14.582	4.3983	1	3414800			11249	238	5603	5626	13635	13635					0.09899538690888221
ILRYVPSI	8	Unmodified	_ILRYVPSI_					0	0	0		L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|226|2|anti-sense;L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|101|2|anti-sense;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|267|2|anti-sense;L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|190|3|anti-sense;L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|145|2|anti-sense;chr5:124062510-124213455|90|11.21|0.0|12.03|-|1|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|35;chr2:182748376-182751658|104|12.19|0.28|5.42|+|2|TE_info:L1PA3,L1PA3_dup1364,L1,LINE,donor,-,182745742,182748376|None,DNAJC10|39;L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|263|2|anti-sense;L1PA8_dup7672|chr19:21549449-21550650:-|1.0893067253068611|0.363832208290546|1.58|386.0|37|1|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense	L1PA8A_dup160|chr1:247133953-247136664:+|1.5135014545884105|0.4971293307696565|1.61|429.0|130|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	960.587679	959.580402	1.7017	0.0016346	6.4984	0.0062423	8.2	0.0078769	960.59315646192	78.784	0.36256	79.093	78.925	79.288	0.30932	0.03433	0.0011596	NaN	14.582	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2903600			11250	238	5603	5626							0.09899538690888221
ILSDGLEFI	9	Unmodified	_ILSDGLEFI_					0	0	0		tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7777892947197	2	503.776408	1005.53826	2.8721	0.0014469	0.79771	0.00040187	3.6698	0.0018487	503.7757906543439	79.811	0.58788	81.063	80.769	81.357	1.2512					40	18	3	0	0	0	0.3154	1	33446	33446		24.674	1.5255	1	2297100			11251	16829	5604	5627	13636	13636					0.03571518491855841
ILSDGLEFI	9	Unmodified	_ILSDGLEFI_					0	0	0		tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	tr|A0A7D6VRE6|A0A7D6VRE6_9CLOTsite-specificDNA-methyltransferase(adenine-specific)OS=ClostridiumintestinaleOX=36845GN=HZF06_06585PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	503.776408	1005.53826	2.3936	0.0012058	1.1206	0.00056455	3.5142	0.0017704	503.77636190218306	80.664	0.15537	80.954	80.84	80.995	0.29056	-0.081345	-6.4351E-05	NaN	24.674	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541040			11252	16829	5604	5627							0.03571518491855841
ILSGVILEV	9	Unmodified	_ILSGVILEV_					0	0	0		ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.5893432497978	1	942.58701	941.579734	3.0676	0.0028915	-1.157	-0.0010905	1.9106	0.0018009	942.586226179328	74.614	0.33343	75.92	75.756	76.09	1.3063					17	10	2	0	0	0	0.076627	1	31299	31299		57.471	2.6978	1	1172000			11253	3596	5605	5628	13637	13637					0.10660699251184269
ILSGVILEV	9	Unmodified	_ILSGVILEV_					0	0	0		ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	942.5886718630791	1	942.58701	941.579734	3.1989	0.0030153	-1.5617	-0.001472	1.6372	0.0015432	942.5858305591568	74.145	0.30336	75.941	75.778	76.082	1.7962					16	9	2	0	0	0	0.076627	1	31118	31118		57.471	0	1	1307900			11254	3596	5605	5628	13638	13638					0.10660699251184269
ILSGVILEV	9	Unmodified	_ILSGVILEV_					0	0	0		ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	ENSG00000161544|ENST00000293230|CYGB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	942.58701	941.579734	1.7699	0.0016683	-2.7476	-0.0025899	-0.97768	-0.00092155	942.5840382426535	76.172	0.24268	76.172	76.041	76.284	0	0.14947	-0.0006099	NaN	57.471	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	582190			11255	3596	5605	5628							0.10660699251184269
ILSGVIRSV	9	Unmodified	_ILSGVIRSV_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000599905.1_1_19:7702035-7703991:+|nuORF;STXBP2|p.D25Vfs*53|1|0.21|ENSG00000076944|chr19:7638762-7638762|A/-|frameshift_variant;ENST00000595181.5_1_19:7702035-7704702:+|nuORF;ENST00000597467.1_1_19:7701993-7703991:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.3005248904228	2	472.300384	942.586216	1.3588	0.00064177	0.7695	0.00036344	2.1283	0.0010052	472.3008379952542	38.004	0.25981	39.288	39.141	39.401	1.284					15	9	2	0	0	0	0.50272	1	15933	15933		15.248	0.41021	1	3706800			11256	952	5606	5629	13639	13639					0.112626372025602
ILSGVIRSV	9	Unmodified	_ILSGVIRSV_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000599905.1_1_19:7702035-7703991:+|nuORF;STXBP2|p.D25Vfs*53|1|0.21|ENSG00000076944|chr19:7638762-7638762|A/-|frameshift_variant;ENST00000595181.5_1_19:7702035-7704702:+|nuORF;ENST00000597467.1_1_19:7701993-7703991:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.3008605837822	2	472.300384	942.586216	1.0683	0.00050457	0.89299	0.00042176	1.9613	0.00092632	472.30053821558243	37.45	0.3055	39.27	39.097	39.403	1.8202					19	10	3	0	0	0	0.11669	1	15697	15697		43.772	5.7984	1	1552900			11257	952	5606	5629	13640	13640					0.112626372025602
ILSLTAYSS	9	Unmodified	_ILSLTAYSS_					0	0	0			REV__tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	REV__tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7624694705009	2	477.760758	953.506963	3.5149	0.0016793	-2.5775	-0.0012314	0.93743	0.00044787	477.75998115523777	85.667	0.76757	87.214	86.722	87.49	1.547					42	31	2	0	0	0	0.5697	1	36104	36104		12.532	0	1	6794100	+		11258	15188	5607	5630	13641	13641					0.028349454577551114
ILSSAASHIW	10	Unmodified	_ILSSAASHIW_					0	0	0			REV__nc|ENSG00000156463|Q8TEC5-3|SH3RF2	REV__nc|ENSG00000156463|Q8TEC5-3|SH3RF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.7947875857353	2	542.792924	1083.57129	2.666	0.0014471	-2.187	-0.0011871	0.47899	0.00025999	542.7919996012586	91.966	0.51657	92.156	91.819	92.336	0.19041					25	15	2	0	0	0	0.89803	1	38445	38445		1.6526	0.45928	1	552400	+		11259	10513	5608	5631	13642	13642					0.032851453345756454
ILTAVRRR	8	Unmodified	_ILTAVRRR_					0	0	0			REV__ENST00000452003.1_1_2:75745265-75745769:-|nuORF	REV__ENST00000452003.1_1_2:75745265-75745769:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.8256408572197	2	492.824892	983.635232	3.5076	0.0017286	-1.6989	-0.00083728	1.8087	0.00089135	492.82399123555666	98.862	0.097649	99.06	99.013	99.11	0.19767					9	3	3	0	0	0	0.74212	1	41627	41627		26.341	3.1929	1	6425600	+		11260	13141	5609	5632	13643	13643					0.1427597028217633
ILTCSYLLL	9	Carbamidomethyl (C)	_ILTC(Carbamidomethyl (C))SYLLL_	ILTC(1)SYLLL		ILTC(44)SYLLL		0	1	0		nc|ENSG00000149452|Q8TCC7-5|SLC22A8;nc|ENSG00000149452|Q8TCC7-4|SLC22A8;ENSG00000149452|ENST00000336232|SLC22A8;nc|ENSG00000149452|Q8TCC7-2|SLC22A8	nc|ENSG00000149452|Q8TCC7-5|SLC22A8	nc|ENSG00000149452|Q8TCC7-5|SLC22A8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	548.3099853396416	2	548.309561	1094.60457	1.8201	0.00099799	-1.7111	-0.00093819	0.10907	5.9804E-05	548.3083800425319	66.952	0.28642	67.276	67.127	67.414	0.32449					23	9	4	0	0	0	0.11478	1	28013	28013		44.407	6.433	1	2688900			11261	3238	5610	5633	13644	13644	5				0.06105011062254562
ILTDITKGV	9	Unmodified	_ILTDITKGV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.2929870486259	2	480.292225	958.569897	2.3949	0.0011503	-0.86305	-0.00041452	1.5319	0.00073574	480.29165814468575	38.515	0.26506	38.823	38.706	38.971	0.30857					26	11	3	0	0	0	0.053939	2	16229	16177;16229		66.457	12.624	1	5448500			11262	3983	5611	5634	13645;13646	13646					0.0889551124580521
ILTDITKGV	9	Unmodified	_ILTDITKGV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2921630740166	2	480.292225	958.569897	0.60102	0.00028866	-0.34398	-0.00016521	0.25704	0.00012345	480.29198728665693	37.253	0.31955	38.537	38.363	38.682	1.284					66	27	3	0	0	0	0.036104	3	15633	15597;15633;15677		79.596	17.082	1	22684000			11263	3983	5611	5634	13647;13648;13649	13648					0.0889551124580521
ILTDITKGV	9	Unmodified	_ILTDITKGV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2918578982353	2	480.292225	958.569897	0.68466	0.00032884	-1.4699	-0.00070597	-0.78522	-0.00037713	480.29141383377004	36.637	0.31425	38.454	38.3	38.614	1.8176					48	21	3	0	0	0	0.036104	2	15379	15379;15422		79.596	21.928	1	14940000			11264	3983	5611	5634	13650;13651	13650					0.0889551124580521
ILTDITKGV	9	Unmodified	_ILTDITKGV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;GNB2-EEF2|1|fusion	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	480.292225	958.569897	1.8872	0.00090642	0.32172	0.00015452	2.209	0.0010609	480.292379134328	39.034	0.28128	39.034	38.89	39.171	0	0.32165	0.00077369	NaN	79.596	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4202800			11265	3983	5611	5634							0.0889551124580521
ILTDRWRWLFV	11	Unmodified	_ILTDRWRWLFV_					0	0	0			REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|124|1|anti-sense	REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|124|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2858459353447	3	502.285628	1503.83505	1.902	0.00095534	0.40844	0.00020516	2.3104	0.0011605	502.2857294506661	45.994	0.6637	45.994	45.819	46.482	0					39	20	4	0	0	0	1.0357	1	19210	19210		0.50596	0.051438	1	3209900	+		11266	14286	5612	5635	13652	13652					0.10328980439271618
ILTDRWRWLFV	11	Unmodified	_ILTDRWRWLFV_					0	0	0			REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|124|1|anti-sense	REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|124|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2865783572197	3	502.285628	1503.83505	2.272	0.0011412	-0.67567	-0.00033938	1.5963	0.0008018	502.28527701629656	45.382	0.74087	45.711	45.498	46.239	0.32899					54	24	4	0	0	0	1.0357	1	19096	19096		0.50596	0.09769	1	3964700	+		11267	14286	5612	5635	13653	13653					0.10328980439271618
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	970.6192504763603	1	970.61831	969.611034	1.7767	0.0017245	-0.225	-0.00021839	1.5517	0.0015061	970.6177277611152	79.923	0.80696	79.923	79.671	80.478	0					48	25	3	0	0	0	0.028763	3	33275	33227;33275;33329		89.427	29.037	1	3883400			11268	1842	5613	5636	13654;13655;13656	13655					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.8138000369072	2	485.812793	969.611034	1.8315	0.00088976	0.47105	0.00022884	2.3025	0.0011186	485.81290030867495	79.871	0.77573	79.871	79.641	80.417	0					54	24	3	0	0	0	0.046276	3	33302	33260;33302;33355		70.716	14.174	1	7103400			11269	1842	5613	5636	13657;13658;13659	13658					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	970.6205932497978	1	970.61831	969.611034	1.7961	0.0017433	0.16585	0.00016097	1.962	0.0019043	970.6184332048526	79.494	0.73068	79.795	79.558	80.289	0.30046					52	22	3	0	0	0	0.028763	4	33244	33194;33244;33298;33365		89.427	29.037	1	3208700			11270	1842	5613	5636	13660;13661;13662;13663	13661					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.8140746951103	2	485.812793	969.611034	2.5324	0.0012303	0.050184	2.438E-05	2.5826	0.0012547	485.8126996396215	79.466	0.79433	79.766	79.558	80.353	0.30047					58	24	3	0	0	0	0.046276	2	33229	33229;33269		70.716	17.14	1	6280000			11271	1842	5613	5636	13664;13665	13664					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	970.6208984255791	1	970.61831	969.611034	2.3505	0.0022814	0.62694	0.00060852	2.9774	0.0028899	970.6187698712203	78.504	1.0232	79.771	79.481	80.504	1.2668					86	32	4	0	0	0	0.028763	7	32942	32893;32942;32981;33020;33066;33121;33185		89.427	29.037	1	16194000			11272	1842	5613	5636	13666;13667;13668;13669;13670;13671;13672	13667					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.8142578005791	2	485.812793	969.611034	2.7738	0.0013475	0.16084	7.8139E-05	2.9346	0.0014257	485.8128015297421	78.565	1.0554	79.832	79.481	80.536	1.2668					99	33	4	0	0	0	0.046276	6	32968	32919;32968;33007;33046;33087;33127		70.716	17.14	1	25398000			11273	1842	5613	5636	13673;13674;13675;13676;13677;13678	13674					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	970.6197387576103	1	970.61831	969.611034	1.6865	0.001637	0.75297	0.00073084	2.4395	0.0023678	970.6187279115192	78.015	0.84044	79.767	79.526	80.367	1.7514					67	26	4	0	0	0	0.028763	5	32758	32677;32720;32758;32798;32841		89.427	29.037	1	11000000			11274	1842	5613	5636	13679;13680;13681;13682;13683	13681					0.12501272285282994
ILTDVVIVV	9	Unmodified	_ILTDVVIVV_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.8137695193291	2	485.812793	969.611034	1.8593	0.00090326	0.40147	0.00019504	2.2607	0.0010983	485.8129583721364	78.106	1.0578	79.857	79.495	80.553	1.7514					104	33	4	0	0	0	0.046276	5	32695	32695;32732;32814;32868;32921		70.716	17.14	1	18841000			11275	1842	5613	5636	13684;13685;13686;13687;13688	13684					0.12501272285282994
ILTHRYPA	8	Unmodified	_ILTHRYPA_					0	0	0			REV__sp|Q6SW34|UL116_HCMVMUncharacterizedproteinUL116OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL116PE=3SV=1	REV__sp|Q6SW34|UL116_HCMVMUncharacterizedproteinUL116OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL116PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	486.3127624392509	2	485.777077	969.5396	2.5928	0.0012595	0.26569	0.00012907	2.8585	0.0013886	485.7777405026373	66.927	0.12378	67.251	67.158	67.282	0.32449					5	3	2	0	0	0	2.3239	1	28017	28017		6.3541	0	1	136720	+		11276	14660	5614	5637	13689	13689					0.053611973712691
ILTIMAKT	8	Unmodified	_ILTIMAKT_					0	0	0			REV__ENST00000434856.1_1_1:120144028-120151554:+|nuORF	REV__ENST00000434856.1_1_1:120144028-120151554:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	445.7745239138603	2	445.772614	889.530675	4.4045	0.0019634	0.25924	0.00011556	4.6637	0.002079	445.7727172909889	94.069	0.72277	94.81	94.382	95.105	0.74123					74	22	5	0	0	0	0.88663	2	39507	39507;39583		4.756	0	1	39958000	+		11277	13045	5615	5638	13690;13691	13690					0.08149087690583201
ILTINKCTL	9	Unmodified	_ILTINKCTL_					0	0	0		ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	ENSG00000086967|ENST00000357701|MYBPC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8054992556572	2	509.801903	1017.58925	4.1708	0.0021263	1.6874	0.00086026	5.8582	0.0029865	509.80250007937366	81.923	0.46587	83.136	82.945	83.411	1.2125					37	14	3	0	0	0	0.68551	1	34369	34369		7.9102	0.62092	1	5138900			11278	1079	5616	5639	13692	13692					0.08116144265068215
ILTKRKLYVVF	11	Unmodified	_ILTKRKLYVVF_					0	0	0			REV__ENSG00000148848|ENST00000448723|ADAM12	REV__ENSG00000148848|ENST00000448723|ADAM12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.9758788943291	4	345.724787	1378.87004	0.37143	0.00012841	0.05273	1.823E-05	0.42416	0.00014664	345.97571082065514	32.5	0.54638	34.325	34.032	34.579	1.8246					35	20	4	0	0	0	1.0388	1	13693	13693		0.50596	0	1	2266100	+		11279	10357	5617	5640	13693	13693					0.1957622324721342
ILTNDTSAV	9	Unmodified	_ILTNDTSAV_					0	0	0			REV__ENST00000461513.1_1_17:49579856-49580498:-|nuORF	REV__ENST00000461513.1_1_17:49579856-49580498:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	466.9003478884697	2	467.248015	932.481476	1.7082	0.00079816	-4.4082	-0.0020597	-2.7	-0.0012615	467.24590958274206	54.56	0.88186	56.528	56.223	57.105	1.9684					56	29	3	0	0	0	0.10844	1	22776	22776		16.942	1.1741	1	6172800	+		11280	13199	5618	5641	13694	13694					0.012534709353303697
ILTRRVWK	8	Unmodified	_ILTRRVWK_					0	0	0			REV__ENST00000504959.5_1_4:186260544-186290945:+|nuORF	REV__ENST00000504959.5_1_4:186260544-186290945:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1634399294853	2	536.342918	1070.67128	0.44034	0.00023617	-1.9269	-0.0010335	-1.4866	-0.00079733	536.8433828172979	13.068	0.12452	13.068	12.99	13.115	0					5	3	2	0	0	0	2.3239	1	5422	5422		2.5775	0	1	386480	+		11281	9281	5619	5642	13695	13695					0.13877427459033242
ILTSMWML	8	Unmodified	_ILTSMWML_					0	0	0			REV__ENST00000268182.9_1_15:91026791-91027525:+|nuORF	REV__ENST00000268182.9_1_15:91026791-91027525:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5200073122978	1	994.510022	993.502746	3.5362	0.0035168	0.61673	0.00061334	4.1529	0.0041301	994.5104080154063	49.728	0.40704	51.119	50.948	51.355	1.3911					29	12	3	0	0	0	0.80415	1	20777	20777		20.871	1.4322	1	5102100	+		11282	12224	5620	5643	13696	13696					0.005734414388484765
ILTVRENN	8	Unmodified	_ILTVRENN_					0	0	0		ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	ENSG00000171815|ENST00000306549|PCDHB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.5367919802666	1	958.531621	957.524344	2.2696	0.0021755	3.7359	0.0035809	6.0055	0.0057565	958.5363569389909	70.471	0.19352	71.824	71.712	71.906	1.3536					8	5	2	0	0	0	0.77833	1	29583	29583		23.148	3.7094	1	2444600			11283	4211	5621	5644	13697	13697					0.04388285783431911
ILTVSAMDK	9	Unmodified	_ILTVSAMDK_					0	0	0		FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant;FAT4|p.D3244Lfs*13|1|0.23|ENSG00000196159|chr4:125450744-125450745|-/ACTTACTGTTTCGGCAA|frameshift_variant;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4;nc|ENSG00000196159|Q6V0I7-2|FAT4	FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant	FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2692443728447	2	489.270435	976.526318	0.67027	0.00032794	-0.97157	-0.00047536	-0.3013	-0.00014742	489.27024090551424	18.457	0.31372	19.436	19.281	19.595	0.97922					20	11	2	0	0	0	0.17276	1	7679	7679		36.127	7.6402	1	755600			11284	4918	5622	5645	13698	13698					0.03711578477020794
ILVASILLLV	10	Unmodified	_ILVASILLLV_					0	0	0			REV__tr|A0A553SG30|A0A553SG30_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10000PE=4SV=1	REV__tr|A0A553SG30|A0A553SG30_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10000PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.3691894412041	2	527.367736	1052.72092	2.7422	0.0014462	-0.23853	-0.0001258	2.5037	0.0013204	527.3675533344979	74.897	0.24763	75.221	75.082	75.329	0.32464					13	7	2	0	0	0	0.5476	1	31339	31339		25.399	4.9457	1	776030	+		11285	14730	5623	5646	13699	13699					0.1966669762446145
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3066284060478	2	515.302593	1028.59063	4.6841	0.0024137	1.6407	0.00084548	6.3248	0.0032592	515.3038438066752	87.378	0.33913	88.47	88.272	88.612	1.0918					24	10	3	0	0	0	0.41943	1	36873	36873		19.439	3.6708	1	2137200			11286	4789	5624	5647	13700	13700					0.07748101625475101
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1029.608935534954	1	1029.59791	1028.59063	5.1126	0.0052639	3.1109	0.003203	8.2235	0.0084669	1029.602777835392	86.934	0.24759	88.429	88.271	88.518	1.4953					13	7	2	0	0	0	0.12174	1	36625	36625		42.095	2.1372	1	1350700			11287	4789	5624	5647	13701	13701					0.07748101625475101
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3076660037041	2	515.302593	1028.59063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.878	1	88.373	87.873	88.873	1.4953								0	0	0	0.069884	1	36627	36627		40.449	11.962	1				11288	4789	5624	5647	13702	13702					0.07748101625475101
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	515.302593	1028.59063	2.6941	0.0013883	1.4165	0.0007299	4.1106	0.0021182	515.3031473822058	88.652	0.18922	88.652	88.543	88.732	0	0.13255	0.00011342	NaN	19.439	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	600730			11289	4789	5624	5647							0.07748101625475101
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1029.59791	1028.59063	3.0153	0.0031046	1.9625	0.0020206	4.9778	0.0051252	1029.6015228193514	88.218	0.2765	88.453	88.291	88.567	0.23471	0.011671	-0.00066917	NaN	42.095	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572260			11290	4789	5624	5647							0.07748101625475101
ILVDTVWAL	9	Unmodified	_ILVDTVWAL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3;KPNA3|p.L334Ifs*9|1|0.85|ENSG00000102753|chr13:49709600-49709604|AAGAG/-|frameshift_variant	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	515.302593	1028.59063	2.7601	0.0014223	0.40684	0.00020964	3.167	0.0016319	515.3027119026754	88.202	0.24451	88.436	88.354	88.598	0.2347	-0.083224	-0.0009271	NaN	19.439	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	699500			11291	4789	5624	5647							0.07748101625475101
ILVDWLVQV	9	Unmodified	_ILVDWLVQV_					0	0	0		ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.8251830935478	2	542.823692	1083.63283	1.4439	0.00078378	3.8219	0.0020746	5.2658	0.0028584	542.8257632360874	95.634	0.26378	95.634	95.539	95.803	0					18	8	3	0	0	0	0.063746	2	39970	39970;40019		60.39	34.99	1	1585600			11292	3473	5625	5648	13703;13704	13703					0.09436077033842594
ILVDWLVQV	9	Unmodified	_ILVDWLVQV_					0	0	0		ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8271362185478	2	542.823692	1083.63283	4.1083	0.0022301	1.075	0.00058352	5.1833	0.0028136	542.8241826502194	94.689	0.48103	95.43	95.2	95.681	0.74124					35	15	3	0	0	0	0.070055	3	39854	39807;39854;39901		77.984	39.833	1	4289700			11293	3473	5625	5648	13705;13706;13707	13706					0.09436077033842594
ILVDWLVQV	9	Unmodified	_ILVDWLVQV_					0	0	0		ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8254272341728	2	542.823692	1083.63283	3.2867	0.0017841	1.2607	0.00068431	4.5474	0.0024684	542.8244186589437	94.223	0.47688	95.411	95.206	95.682	1.1887					33	14	3	0	0	0	0.093059	3	39700	39610;39658;39700		67.344	36.707	1	2746900			11294	3473	5625	5648	13708;13709;13710	13710					0.09436077033842594
ILVDWLVQV	9	Unmodified	_ILVDWLVQV_					0	0	0		ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	542.823692	1083.63283	2.7138	0.0014731	0.89329	0.0004849	3.6071	0.001958	542.8237578259847	95.39	0.22777	95.513	95.426	95.654	0.12331	0.015896	-0.0010895	NaN	60.39	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1072500			11295	3473	5625	5648							0.09436077033842594
ILWATAHLP	9	Unmodified	_ILWATAHLP_					0	0	0		nc|ENSG00000188467|Q71RS6-2|SLC24A5;ENSG00000188467|ENST00000341459|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	nc|ENSG00000188467|Q71RS6-2|SLC24A5	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1988098025322	3	341.19916	1020.57565	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.43	1	111.48	110.98	111.98	0.047043								0	0	0	0.42693	1	48045	48045		0.26902	0	1				11296	4863	5626	5649	13711	13711					0.0661865454811732
ILWETVPSM	9	Unmodified	_ILWETVPSM_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.2793456912041	2	538.27826	1074.54197	1.614	0.00086878	-1.2479	-0.0006717	0.36613	0.00019708	538.2782407987187	72.764	0.34535	72.764	72.588	72.933	0					25	10	3	0	0	0	0.28372	2	30273	30273;30325		36.044	18.585	1	2451500			11297	932	5627	5650	13712;13713	13712					0.00767864994077172
ILWETVPSM	9	Unmodified	_ILWETVPSM_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.2802612185478	2	538.27826	1074.54197	1.9553	0.0010525	-0.61247	-0.00032968	1.3429	0.00072283	538.2786252372421	72.302	0.409	72.627	72.42	72.829	0.32494					28	12	3	0	0	0	0.37774	2	30230	30230;30278		30.225	7.7316	1	2551700			11298	932	5627	5650	13714;13715	13714					0.00767864994077172
ILWETVPSM	9	Unmodified	_ILWETVPSM_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2802612185478	2	538.27826	1074.54197	2.5574	0.0013766	0.29742	0.00016009	2.8548	0.0015367	538.278903650493	71.204	0.44566	72.546	72.302	72.748	1.3415					45	14	4	0	0	0	0.070055	3	29876	29829;29876;29932		77.984	29.638	1	14032000			11299	932	5627	5650	13716;13717;13718	13717					0.00767864994077172
ILWETVPSM	9	Unmodified	_ILWETVPSM_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2803832888603	2	538.27826	1074.54197	1.1131	0.00059915	1.5327	0.00082499	2.6457	0.0014241	538.2795499753795	70.742	0.57486	72.579	72.319	72.894	1.8378					53	18	4	0	0	0	0.070055	2	29679	29633;29679		77.984	29.638	1	14091000			11300	932	5627	5650	13719;13720	13720					0.00767864994077172
ILWKLQQRLL	10	Unmodified	_ILWKLQQRLL_					0	0	0			REV__nc|ENSG00000140367|Q8WVN8-2|UBE2Q2	REV__nc|ENSG00000140367|Q8WVN8-2|UBE2Q2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1998474001884	4	328.463133	1309.82343	-2.2626	-0.0007432	-2.6476	-0.00086965	-4.9103	-0.0016128	328.4624945386884	34.121	0.15178	34.121	34.008	34.16	0					6	4	2	0	0	0	0.12557	1	14272	14272		1.7423	0.52744	1	167980	+		11301	10123	5628	5651	13721	13721					0.18090783415914302
ILWLWKKH	8	Unmodified	_ILWLWKKH_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3477661013603	2	562.342387	1122.67022	1.3848	0.00077873	3.2288	0.0018157	4.6136	0.0025944	562.3440565614203	74.125	1.2926	74.125	73.734	75.027	0					60	40	2	0	0	0	0.88409	1	30761	30761		6.3541	0.62225	1	1676500			11302	3851	5629	5652	13722	13722					0.11379213090117446
ILWLYFYR	8	Unmodified	_ILWLYFYR_					0	0	0		nc|ENSG00000211784|A0A0B4J240|TRAV10	nc|ENSG00000211784|A0A0B4J240|TRAV10	nc|ENSG00000211784|A0A0B4J240|TRAV10	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3295776247978	2	587.326402	1172.63825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.236	1	46.236	45.736	46.736	0								0	0	0	1.0178	1	19335	19335		2.5775	0.27475	1				11303	7990	5630	5653	13723	13723					0.05883800616311419
ILWSEAIFL	9	Unmodified	_ILWSEAIFL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3115722537041	2	546.310418	1090.60628	2.7187	0.0014853	-2.5164	-0.0013747	0.20239	0.00011057	546.309533362032	97.012	0.12536	97.117	97.038	97.163	0.105					6	3	2	0	0	0	0.10722	1	40602	40602		46.921	14.135	1	4198600			11304	117;1325	5631	5654	13724	13724					0.06460388142522788
ILWSEAIFL	9	Unmodified	_ILWSEAIFL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3127929568291	2	546.310418	1090.60628	3.2432	0.0017718	3.1778	0.0017361	6.421	0.0035079	546.3120187038569	96.683	0.21868	96.989	96.882	97.101	0.3062					14	6	3	0	0	0	0.10722	1	40662	40662		46.921	2.5139	1	6818500			11305	117;1325	5631	5654	13725	13725					0.06460388142522788
ILWSEAIFL	9	Unmodified	_ILWSEAIFL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6	CAPNS1-PRPF6|1|fusion;ENSG00000101161|ENST00000266079|PRPF6	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1091.617724597454	1	1091.61356	1090.60628	3.4374	0.0037523	1.8547	0.0020247	5.2921	0.005777	1091.6161289573804	96.683	0.12482	96.989	96.913	97.038	0.3062					6	3	2	0	0	0	0.069258	1	40663	40663		60.39	12.044	1	4906500			11306	117;1325	5631	5654	13726	13726					0.06460388142522788
ILWSHLELL	9	Unmodified	_ILWSHLELL_					0	0	0		ENST00000419271.1_1_7:63353684-63354623:+|nuORF;ENSG00000154727|ENST00000400075|GABPA	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3306762576103	2	562.329142	1122.64373	1.3571	0.00076312	0.77443	0.00043549	2.1315	0.0011986	562.329436574677	77.953	0.37711	77.953	77.78	78.157	0					18	11	2	0	0	0	0.13873	1	32460	32460		39.957	1.8061	1	599860			11307	3394	5632	5655	13727	13727					0.08731479408129417
ILWSHLELL	9	Unmodified	_ILWSHLELL_					0	0	0		ENST00000419271.1_1_7:63353684-63354623:+|nuORF;ENSG00000154727|ENST00000400075|GABPA	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3292114138603	2	562.329142	1122.64373	2.5686	0.0014444	-1.3461	-0.00075693	1.2226	0.00068749	562.3286641077879	76.256	0.42109	77.55	77.371	77.792	1.2938					32	13	3	0	0	0	0.031324	2	32001	32001;32050		85.357	21.794	1	4436000			11308	3394	5632	5655	13728;13729	13728					0.08731479408129417
ILWSHLELL	9	Unmodified	_ILWSHLELL_					0	0	0		ENST00000419271.1_1_7:63353684-63354623:+|nuORF;ENSG00000154727|ENST00000400075|GABPA	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	ENST00000419271.1_1_7:63353684-63354623:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	562.329142	1122.64373	1.9166	0.0010778	-0.83752	-0.00047096	1.0791	0.00060681	562.3287963984375	77.336	0.34541	77.653	77.543	77.888	0.31653	-0.06593	-0.00034737	NaN	85.357	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	942180			11309	3394	5632	5655							0.08731479408129417
ILWYFEHQL	9	Unmodified	_ILWYFEHQL_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	624.8240234255791	2	624.824224	1247.63389	2.5575	0.001598	-3.0008	-0.0018749	-0.44324	-0.00027695	624.822248403821	92.062	0.48116	92.252	92.014	92.495	0.19042					45	14	4	0	0	0	0.30098	3	38583	38493;38583;38630		25.399	2.663	1	3923200			11310	1937	5633	5656	13730;13731;13732	13731					0.01998291402742325
ILWYFEHQL	9	Unmodified	_ILWYFEHQL_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.8243896365166	2	624.824224	1247.63389	3.8598	0.0024117	-2.2069	-0.0013789	1.6529	0.0010328	624.8226460336844	91.219	0.50615	92.2	91.942	92.448	0.98156					45	15	4	0	0	0	0.42305	2	38363	38363;38497		19.257	2.1441	1	7005000			11311	1937	5633	5656	13733;13734	13733					0.01998291402742325
ILWYFEHQL	9	Unmodified	_ILWYFEHQL_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8244506716728	2	624.824224	1247.63389	3.1514	0.0019691	-1.9927	-0.0012451	1.1587	0.000724	624.8230263647149	90.753	0.47692	92.119	91.897	92.374	1.366					44	14	4	0	0	0	0.30098	2	38218	38171;38218		25.399	2.663	1	6524700			11312	1937	5633	5656	13735;13736	13736					0.01998291402742325
ILYDDDTVYY	10	Unmodified	_ILYDDDTVYY_					0	0	0			REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.1963683962822	3	427.19581	1278.5656	3.7348	0.0015955	-0.78074	-0.00033353	2.9541	0.001262	427.1949194395876	90.726	0.76814	92.092	91.638	92.406	1.366					34	23	2	0	0	0	0.87699	1	38262	38262		1.9064	0.1641	1	2472900	+		11313	15815	5634	5657	13737	13737					-0.06254042758428113
ILYELKVEL	9	Unmodified	_ILYELKVEL_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3373290896416	2	560.336633	1118.65871	1.2594	0.00070567	0.96336	0.0005398	2.2227	0.0012455	560.3375525954477	66.237	0.55012	66.237	66.058	66.608	0					22	16	2	0	0	0	0.18809	1	27578	27578		34.402	3.7652	1	714890			11314	3979	5635	5658	13738	13738					0.10412926485469143
ILYELKVEL	9	Unmodified	_ILYELKVEL_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3381225466728	2	560.336633	1118.65871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.62	1	66.027	65.527	66.527	1.4071								0	0	0	0.04981	1	27102	27102		57.722	6.0922	1				11315	3979	5635	5658	13739	13739					0.10412926485469143
ILYELKVEL	9	Unmodified	_ILYELKVEL_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3392211794853	2	560.336633	1118.65871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.091	1	66.019	65.519	66.519	1.928								0	0	0	0.04337	1	26890	26890		45.7	1.8413	1				11316	3979	5635	5658	13740	13740					0.10412926485469143
ILYEMCCM	8	Unmodified	_ILYEMCCM_					0	0	0		nc|ENSG00000114670|Q8NG66-2|NEK11;nc|ENSG00000114670|Q8NG66-3|NEK11;nc|ENSG00000114670|Q8NG66-4|NEK11;ENSG00000114670|ENST00000383366|NEK11	nc|ENSG00000114670|Q8NG66-2|NEK11	nc|ENSG00000114670|Q8NG66-2|NEK11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2016174197197	2	503.199253	1004.38395	2.0344	0.0010237	1.6762	0.00084347	3.7106	0.0018672	503.20048883156153	42.157	1.9466	43.497	43.08	45.027	1.3399					223	62	7	0	0	0	0.87935	7	17640	17640;17690;17743;17794;17840;17885;18060		9.3474	0	1	5633500			11317	1878	5636	5659	13741;13742;13743;13744;13745;13746;13747	13741					-0.11806416852687107
ILYLFALISVT	11	Unmodified	_ILYLFALISVT_					0	0	0		nc|ENSG00000164199|Q8WXG9-2|ADGRV1;ENSG00000164199|ENST00000405460|ADGRV1	nc|ENSG00000164199|Q8WXG9-2|ADGRV1	nc|ENSG00000164199|Q8WXG9-2|ADGRV1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	313.1138183474541	4	313.944242	1251.74786	0.14908	4.6802E-05	-0.26911	-8.4485E-05	-0.12003	-3.7683E-05	313.94316841382613	30.432	0.15442	32.247	32.139	32.294	1.8151					6	4	2	0	0	0	0.14606	1	12765	12765		0.50596	0	1	142170			11318	3760	5637	5660	13748	13748					0.13205761444964992
ILYLTLDSR	9	Unmodified	_ILYLTLDSR_					0	0	0			REV__PCDHGC5|p.F741Lfs*3|1|0.71|ENSG00000240764|chr5:141491459-141491460|-/T|frameshift_variant	REV__PCDHGC5|p.F741Lfs*3|1|0.71|ENSG00000240764|chr5:141491459-141491460|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3177978396416	2	547.316232	1092.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.283	1	36.558	36.058	37.058	1.2746								0	0	0	0.35665	1	14812	14812		13.042	2.9685	1		+		11319	11920	5638	5661	13749	13749					0.0753058516584133
ILYNATKSK	9	Unmodified	_ILYNATKSK_					0	0	0			REV__ENSG00000078246|ENST00000448120|TULP3	REV__ENSG00000078246|ENST00000448120|TULP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.3040038943291	2	519.303124	1036.5917	2.5827	0.0013412	0.13098	6.8017E-05	2.7137	0.0014092	519.3031879251555	75.589	0.37025	75.91	75.742	76.112	0.32163					37	11	4	0	0	0	0.24063	1	31616	31616		28.487	4.4663	1	13562000	+		11320	8788	5639	5662	13750	13750					0.07486315994378856
ILYNRFKV	8	Unmodified	_ILYNRFKV_					0	0	0			REV__CYP2C19|p.S422Vfs*28|1|0.27|ENSG00000165841|chr10:94850027-94850027|G/-|frameshift_variant	REV__CYP2C19|p.S422Vfs*28|1|0.27|ENSG00000165841|chr10:94850027-94850027|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.2435790896416	2	526.816202	1051.61785	2.9795	0.0015697	1.1649	0.00061369	4.1444	0.0021834	526.8163802459417	74.429	0.34991	76.225	76.177	76.527	1.7962					17	10	2	0	0	0	2.3239	1	31325	31325		2.3027	0	1	1374300	+		11321	8418	5640	5663	13751	13751					0.09410629956505545
ILYPHSGF	8	Unmodified	_ILYPHSGF_					0	0	0			REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2477599978447	2	467.245078	932.475603	1.625	0.00075927	1.9954	0.00093232	3.6204	0.0016916	467.24639806695467	55.129	0.84188	56.534	56.09	56.932	1.4048					62	28	3	0	0	0	0.86202	1	23081	23081		15.768	4.6538	1	5284000	+		11322	13294	5641	5664	13752	13752					0.006664172143473479
ILYPHSGF	8	Unmodified	_ILYPHSGF_					0	0	0			REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2474243044853	2	467.245078	932.475603	1.7082	0.00079816	1.8768	0.00087691	3.585	0.0016751	467.24590958274206	54.56	0.88186	56.528	56.223	57.105	1.9684					56	29	3	0	0	0	0.86202	1	22922	22922		15.768	3.2367	1	6172800	+		11323	13294	5641	5664	13753	13753					0.006664172143473479
ILYPHSGF	8	Unmodified	_ILYPHSGF_					0	0	0			REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	REV__ENST00000472259.5_1_2:73276962-73285695:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	467.245078	932.475603	1.625	0.00075927	1.9954	0.00093232	3.6204	0.0016916	467.24639806695467	55.129	0.84188	56.534	56.09	56.932	1.4048	0.0029528	4.0779E-05	NaN	15.768	62	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5284000	+		11324	13294	5641	5664							0.006664172143473479
ILYPKTLFL	9	Unmodified	_ILYPKTLFL_					0	0	0		nc|ENSG00000138814|Q08209-5|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-2|PPP3CA;ENSG00000138814|ENST00000394854|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.3455688357353	2	554.344261	1106.67397	1.3481	0.00074732	1.2791	0.00070908	2.6273	0.0014564	554.3447781461865	69.316	0.31469	69.639	69.469	69.784	0.32224					21	9	3	0	0	0	0.20671	1	28983	28983		32.305	10.559	1	1585100			11325	2857	5642	5665	13754	13754					0.12489838073315696
ILYPKTLFL	9	Unmodified	_ILYPKTLFL_					0	0	0		nc|ENSG00000138814|Q08209-5|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-2|PPP3CA;ENSG00000138814|ENST00000394854|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3461181521416	2	554.344261	1106.67397	2.0043	0.001111	1.2984	0.00071974	3.3026	0.0018308	554.3447153615634	68.059	0.34335	69.437	69.271	69.615	1.3778					26	10	3	0	0	0	0.22154	2	28544	28544;28596		30.637	3.7529	1	2157100			11326	2857	5642	5665	13755;13756	13755					0.12489838073315696
ILYPKTLFL	9	Unmodified	_ILYPKTLFL_					0	0	0		nc|ENSG00000138814|Q08209-5|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-2|PPP3CA;ENSG00000138814|ENST00000394854|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	554.344261	1106.67397	1.4117	0.00078255	0.66103	0.00036644	2.0727	0.001149	554.3443310561966	67.477	0.36907	69.347	69.12	69.489	1.87	-0.12737	-0.00048183	NaN	32.305	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2082500			11327	2857	5642	5665							0.12489838073315696
ILYSIDKSL	9	Unmodified	_ILYSIDKSL_					0	0	0			REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	REV__ENST00000486925.1_1_7:87505915-87514494:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.7664672732353	2	526.305332	1050.59611	2.354	0.0012389	-0.01154	-6.0737E-06	2.3425	0.0012329	526.305183432278	49.757	0.34389	51.148	50.98	51.324	1.3911					23	10	3	0	0	0	0.10844	1	20762	20762		16.942	1.0951	1	3388500	+		11328	8510	5643	5666	13757	13757					0.07283780417265007
ILYTGVVVY	9	Unmodified	_ILYTGVVVY_					0	0	0		nc|ENSG00000148942|Q1EHB4-2|SLC5A12;ENSG00000148942|ENST00000396005|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1026.590747058392	1	1026.58701	1025.57973	2.2623	0.0023225	0.89953	0.00092344	3.1619	0.0032459	1026.5881428172802	63.113	0.43855	64.526	64.314	64.753	1.4134					28	13	3	0	0	0	0.061246	2	26484	26439;26484		63.563	6.448	1	2972000			11329	3226	5644	5667	13758;13759	13759					0.06796699251208338
ILYTGVVVY	9	Unmodified	_ILYTGVVVY_					0	0	0		nc|ENSG00000148942|Q1EHB4-2|SLC5A12;ENSG00000148942|ENST00000396005|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	nc|ENSG00000148942|Q1EHB4-2|SLC5A12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1026.590747058392	1	1026.58701	1025.57973	3.0897	0.0031719	0.004008	4.1145E-06	3.0937	0.003176	1026.5873579909485	62.625	0.37647	64.57	64.375	64.752	1.9444					27	11	3	0	0	0	0.046276	2	26285	26237;26285		70.716	19.86	1	3521200			11330	3226	5644	5667	13760;13761	13761					0.06796699251208338
IMAEPIIE	8	Unmodified	_IMAEPIIE_					0	0	0			REV__tr|A0A7D7A384|A0A7D7A384_9CLOTPyrroline-5-carboxylatereductaseOS=ClostridiumintestinaleOX=36845GN=proCPE=3SV=1	REV__tr|A0A7D7A384|A0A7D7A384_9CLOTPyrroline-5-carboxylatereductaseOS=ClostridiumintestinaleOX=36845GN=proCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	915.4824096560478	1	915.485582	914.478305	1.7119	0.0015673	-3.3562	-0.0030726	-1.6443	-0.0015053	915.481249912928	65.525	0.61113	67.434	67.187	67.799	1.9085					26	19	2	0	0	0	0.23051	1	27513	27513		77.984	3.5616	1	1233200	+		11331	15859	5645	5668	13762	13762					0.01764504556990687
IMEDIILTL	9	Unmodified	_IMEDIILTL_					0	0	0		DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant;ENSG00000110367|ENST00000534980|DDX6	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3054077029228	2	530.801568	1059.58858	4.9027	0.0026024	3.6894	0.0019583	8.5921	0.0045607	531.3055979276058	88.207	0.83084	89.653	89.38	90.21	1.4467					48	25	4	0	0	0	0.19075	2	37167	37167;37222		34.102	14.845	1	2985700			11332	401	5646	5669	13763;13764	13763					0.06117304825352221
IMEFHLLIN	9	Unmodified	_IMEFHLLIN_					0	0	0			REV__ENST00000525244.5_1_11:85988143-85988212:+|nuORF	REV__ENST00000525244.5_1_11:85988143-85988212:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	565.3558227419853	2	565.307352	1128.60015	2.9755	0.0016821	1.7075	0.00096525	4.683	0.0026473	565.3089806840492	82.52	0.24527	84.19	84.049	84.294	1.67					17	7	3	0	0	0	0.10339	1	34566	34566		20.454	3.5113	1	1263300	+		11333	13658	5647	5670	13765	13765					0.04099546639349683
IMEIRMQFWRL	11	Unmodified	_IMEIRMQFWRL_					0	0	0			REV__NAP1L4-CFTR|1|fusion	REV__NAP1L4-CFTR|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1523.561206042767	1	1522.80212	1521.79485	1.3087	0.0019928	2.9461	0.0044864	4.2548	0.0064792	1522.8097692131353	27.99	0.26373	27.99	27.775	28.038	0					10	8	2	0	0	0	0.14606	1	11710	11710		0.30703	0.03801	1	3064900	+		11334	8479	5648	5671	13766	13766					0.05481974452823124
IMFRGEVRL	9	Unmodified	_IMFRGEVRL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2143432497978	3	374.214704	1119.62228	0.4705	0.00017607	-0.31392	-0.00011747	0.15657	5.8593E-05	374.2144102558295	36.175	0.20753	37.992	37.871	38.079	1.8176					15	11	2	0	0	0	0.55689	1	15183	15183		8.9762	4.5701	1	1557500			11335	2852	5649	5672	13767	13767					0.06725771107767287
IMGADLLVDI	10	Unmodified	_IMGADLLVDI_					0	0	0		tr|A0A553SPR9|A0A553SPR9_NIACIProbablenicotinate-nucleotideadenylyltransferaseOS=NialliacirculansOX=1397GN=nadDPE=3SV=1	tr|A0A553SPR9|A0A553SPR9_NIACIProbablenicotinate-nucleotideadenylyltransferaseOS=NialliacirculansOX=1397GN=nadDPE=3SV=1	tr|A0A553SPR9|A0A553SPR9_NIACIProbablenicotinate-nucleotideadenylyltransferaseOS=NialliacirculansOX=1397GN=nadDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2955810427666	2	530.291368	1058.56818	2.3474	0.0012448	3.8967	0.0020664	6.2441	0.0033112	530.2950297125499	69.429	0.59795	71.282	70.948	71.546	1.853					47	18	3	0	0	0	0.75645	1	29161	29161		15.847	0.078963	1	4563400			11336	16482	5650	5673	13768	13768					0.04124134165522264
IMGFGKILL	9	Unmodified	_IMGFGKILL_					0	0	0		ENST00000409003.4_2_8:119209739-119209844:-|nuORF	ENST00000409003.4_2_8:119209739-119209844:-|nuORF	ENST00000409003.4_2_8:119209739-119209844:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.2501403689384	2	496.304081	990.59361	2.6262	0.0013034	0.072493	3.5979E-05	2.6987	0.0013394	496.30454655183854	63.388	0.91933	64.801	64.075	64.994	1.4134					42	29	3	0	0	0	0.11333	1	26279	26279		8.5933	0	1	1461200			11337	6374	5651	5674	13769	13769					0.09793653478641318
IMGGFRPL	8	Unmodified	_IMGGFRPL_					0	0	0		tr|A0A7D7ADU8|A0A7D7ADU8_9CLOTDUF4064domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00350PE=4SV=1	tr|A0A7D7ADU8|A0A7D7ADU8_9CLOTDUF4064domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00350PE=4SV=1	tr|A0A7D7ADU8|A0A7D7ADU8_9CLOTDUF4064domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00350PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1210204958916	2	445.749473	889.484393	2.2609	0.0010078	0.80442	0.00035857	3.0653	0.0013664	445.74963341139477	67.983	0.4916	69.361	69.153	69.645	1.3778					19	15	2	0	0	0	2.3239	1	28576	28576		0.79363	0.79363	1	606620			11338	17330	5652	5675	13770	13770					0.035230675791581234
IMGHGGGG	8	Unmodified	_IMGHGGGG_					0	0	0		ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1594726443291	2	343.157948	684.301344	2.9336	0.0010067	1.6364	0.00056153	4.57	0.0015682	343.1581117783969	93.791	0.57125	94.663	94.417	94.988	0.87176					28	17	2	0	0	0	0.89198	1	39461	39461		0	0	1	489410			11339	4795	5653	5676	13771	13771					-0.05343486482627213
IMGHGGGG	8	Unmodified	_IMGHGGGG_					0	0	0		ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1590148806572	2	343.157948	684.301344	2.7799	0.00095394	0.1962	6.7327E-05	2.9761	0.0010213	343.15767976165347	93.443	0.49747	94.72	94.515	95.013	1.277					23	15	2	0	0	0	0.89198	1	39323	39323		0	0	1	708410			11340	4795	5653	5676	13772	13772					-0.05343486482627213
IMGHGGGG	8	Unmodified	_IMGHGGGG_					0	0	0		ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	343.157948	684.301344	-1.3928	-0.00047795	4.713	0.0016173	3.3202	0.0011394	343.15880218989236	94.656	0.31077	94.656	94.486	94.796	0	0.0077594	0.0024216	NaN	0	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321520			11341	4795	5653	5676							-0.05343486482627213
IMGHGGGG	8	Unmodified	_IMGHGGGG_					0	0	0		ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	343.157948	684.301344	2.2391	0.00076837	-0.084158	-2.8879E-05	2.155	0.00073949	343.15733099189316	94.411	0.37648	94.556	94.387	94.764	0.14493	-0.093023	-0.00087079	NaN	0	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285710			11342	4795	5653	5676							-0.05343486482627213
IMGIEIYWDCN	11	Unmodified	_IMGIEIYWDCN_					0	0	0		P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant;nc|ENSG00000089041|Q99572-2|P2RX7;ENSG00000089041|ENST00000328963|P2RX7;nc|ENSG00000089041|Q99572-7|P2RX7;ENST00000539606.5_1_12:121592718-121615069:+|nuORF;nc|ENSG00000089041|Q99572-4|P2RX7;nc|ENSG00000089041|Q99572-8|P2RX7;ENST00000538011.5_1_12:121592718-121622602:+|nuORF	P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant	P2RX7|p.V312Afs*7|1|0.1|ENSG00000089041|chr12:121175440-121175441|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8703185915947	3	452.870275	1355.58899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4908	1	3.2392	2.7392	3.7392	0.7484								0	0	0	0.63775	1	1034	1034		0.50596	0.23694	1				11343	1115	5654	5677	13773	13773					-0.07457643517091128
IMGSDASIVL	10	Unmodified	_IMGSDASIVL_					0	0	0			REV__ENST00000469239.1_1_1:151271282-151274337:-|nuORF	REV__ENST00000469239.1_1_1:151271282-151274337:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2682067751884	2	503.267893	1004.52123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.155	1	58.123	57.623	58.623	1.9684								0	0	0	0.49467	1	23550	23550		25.399	3.6527	1		+		11344	10210	5655	5678	13774	13774					0.019152746143845434
IMIAVYLLFSL	11	Unmodified	_IMIAVYLLFSL_					0	0	0		tr|A0A553SPJ2|A0A553SPJ2_NIACIABCtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26465PE=3SV=1	tr|A0A553SPJ2|A0A553SPJ2_NIACIABCtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26465PE=3SV=1	tr|A0A553SPJ2|A0A553SPJ2_NIACIABCtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26465PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	428.7592346072197	3	428.254166	1281.74067	2.4099	0.0010321	3.8033	0.0016288	6.2133	0.0026609	428.25498065404855	81.459	0.57493	81.739	81.515	82.09	0.2802					26	18	2	0	0	0	0.14606	1	34028	34028		1.4551	0	1	1154800			11345	16473	5656	5679	13775	13775					0.11106705572910869
IMIGLIPWLLN	11	Unmodified	_IMIGLIPWLLN_					0	0	0			REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8854858279228	2	641.883227	1281.7519	2.4082	0.0015458	-0.88401	-0.00056743	1.5242	0.00097834	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	0.89563	2	33692	33692;33739		10.074	2.0939	1	10623000	+		11346	14893	5657	5680	13776;13777	13776					0.12229527667068396
IMIGLIPWLLN	11	Unmodified	_IMIGLIPWLLN_					0	0	0			REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8857299685478	2	641.883227	1281.7519	1.4587	0.0009363	-0.4021	-0.0002581	1.0566	0.0006782	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	0.96769	1	33531	33531		5.7319	0.83484	1	9116700	+		11347	14893	5657	5680	13778	13778					0.12229527667068396
IMIIVGGKRC	10	Unmodified	_IMIIVGGKRC_					0	0	0			REV__tr|A0A7D6ZVF4|A0A7D6ZVF4_9CLOTNickel-dependentlactateracemaseOS=ClostridiumintestinaleOX=36845GN=larAPE=4SV=1	REV__tr|A0A7D6ZVF4|A0A7D6ZVF4_9CLOTNickel-dependentlactateracemaseOS=ClostridiumintestinaleOX=36845GN=larAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3176757693291	2	545.317197	1088.61984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.68	1	73.005	72.505	73.505	0.32494								0	0	0	0.66166	1	30407	30407		1.6526	0	1		+		11348	15733	5658	5681	13779	13779					0.07907599378472696
IMILMLLPF	9	Unmodified	_IMILMLLPF_					0	0	0			REV__tr|A0A7D6ZV49|A0A7D6ZV49_9CLOTYihY/virulencefactorBrkBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02390PE=4SV=1	REV__tr|A0A7D6ZV49|A0A7D6ZV49_9CLOTYihY/virulencefactorBrkBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8309814333916	2	545.823792	1089.63303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.35	1	100.55	100.05	101.05	0.20527								0	0	0	0.089993	1	42198	42198		36.466	8.2929	1		+		11349	15729	5659	5682	13780	13780					0.091800374378181
IMKLVLLEFGY	11	Unmodified	_IMKLVLLEFGY_					0	0	0			REV__tr|A0A7D6ZMN1|A0A7D6ZMN1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12610PE=4SV=1	REV__tr|A0A7D6ZMN1|A0A7D6ZMN1_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12610PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	441.7884399294853	3	442.589437	1324.74648	1.4987	0.0006633	-0.13562	-6.0022E-05	1.3631	0.00060328	442.92362090268375	23.366	0.18357	24.58	24.473	24.657	1.2145					8	5	2	0	0	0	0.14606	1	9756	9756		0.45452	0	1	230030	+		11350	15676	5660	5683	13781	13781					0.09709804084582174
IMKVIKFV	8	Unmodified	_IMKVIKFV_					0	0	0			REV__ENSG00000039123|ENST00000230640|MTREX	REV__ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3158447146416	2	489.314449	976.614345	1.3566	0.00066379	-0.32118	-0.00015716	1.0354	0.00050663	489.31422214686114	77.622	0.675	79.374	79.041	79.716	1.7514					68	21	4	0	0	0	0.89176	1	32463	32463		0.79363	0	1	74157000	+		11351	8590	5661	5684	13782	13782					0.1251024385828714
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(100)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3029052615166	2	545.302267	1088.58998	1.7533	0.00095609	-0.82241	-0.00044846	0.93092	0.00050763	545.3020190685876	50.293	0.38136	50.293	50.088	50.47	0					34	12	4	0	0	0	0.019486	1	20985	20985		99.755	41.076	1	11809000			11352	3061	5662	5685	13783	13783		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(100)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3033325076103	2	545.302267	1088.58998	1.7436	0.00095077	-0.85389	-0.00046563	0.88968	0.00048514	545.3024148830837	50.601	1.4486	50.601	50.437	51.886	0					77	45	4	0	0	0	0.019486	2	21129	21085;21129		99.755	31.675	1	9890600			11353	3061	5662	5685	13784;13785	13785		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(100)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3030273318291	2	545.302267	1088.58998	1.7277	0.00094209	-0.88396	-0.00048203	0.84369	0.00046007	545.3019605927933	49.766	0.3424	50.097	49.89	50.232	0.33019					33	10	4	0	0	0	0.019486	1	20842	20842		99.755	41.076	1	8487700			11354	3061	5662	5685	13786	13786		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(56)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3038818240166	2	545.302267	1088.58998	1.7246	0.00094041	-0.0022031	-1.2013E-06	1.7224	0.00093921	545.3028679186605	50.044	0.90513	50.374	50.232	51.137	0.33019					65	28	4	0	0	0	0.081597	2	21011	20961;21011		55.503	15.228	1	7413100			11355	3061	5662	5685	13787;13788	13788		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(62)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3029662966728	2	545.302267	1088.58998	1.4166	0.00077248	-1.6765	-0.00091418	-0.25985	-0.0001417	545.3024989149667	48.371	0.40438	49.758	49.521	49.925	1.388					36	12	4	0	0	0	0.066197	2	20248	20201;20248		61.602	19.762	1	12450000			11356	3061	5662	5685	13789;13790	13790		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(89)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3029052615166	2	545.302267	1088.58998	1.1965	0.00065244	-1.392	-0.00075904	-0.19548	-0.0001066	545.3026276888372	48.755	0.61814	50.143	49.895	50.513	1.388					47	19	3	0	0	0	0.02878	2	20406	20406;20457		89.401	31.679	1	10428000			11357	3061	5662	5685	13791;13792	13791		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(70)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3030883669853	2	545.302267	1088.58998	2.395	0.001306	-2.6696	-0.0014557	-0.27453	-0.0001497	545.3020243434603	47.886	0.40248	49.862	49.618	50.021	1.976					29	12	4	0	0	0	0.046715	1	20053	20053		70.332	28.376	1	7371700			11358	3061	5662	5685	13793	13793		53			0.04922938914091901
IMLEALERV	9	Oxidation (M)	_IM(Oxidation (M))LEALERV_		IM(1)LEALERV		IM(86)LEALERV	0	0	1		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3033325076103	2	545.302267	1088.58998	2.1897	0.001194	-1.7025	-0.00092837	0.48717	0.00026566	545.3019216031967	48.244	0.61467	50.221	49.899	50.514	1.9772					39	19	3	0	0	0	0.03071	2	20197	20197;20252		86.332	32.499	1	12233000			11359	3061	5662	5685	13794;13795	13794		53			0.04922938914091901
IMLEALERV	9	Unmodified	_IMLEALERV_					0	0	0		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.3057128787041	2	537.30481	1072.59507	1.8182	0.00097695	0.44717	0.00024027	2.2654	0.0012172	537.3052119607538	57.801	0.79494	57.801	57.536	58.331	0					69	24	4	0	0	0	0.019486	4	24094	24049;24094;24133;24172		99.755	26.787	1	22204000			11360	3061	5662	5686	13796;13797;13798;13799	13797					0.06167242776700732
IMLEALERV	9	Unmodified	_IMLEALERV_					0	0	0		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.3052245974541	2	537.30481	1072.59507	2.367	0.0012718	-1.6594	-0.0008916	0.70761	0.0003802	537.3041229717513	57.254	0.6489	57.576	57.395	58.044	0.32103					63	22	5	0	0	0	0.02878	4	24009	23965;24009;24054;24111		89.401	31.679	1	32269000			11361	3061	5662	5686	13800;13801;13802;13803	13801					0.06167242776700732
IMLEALERV	9	Unmodified	_IMLEALERV_					0	0	0		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3053466677666	2	537.30481	1072.59507	0.47548	0.00025548	-0.51213	-0.00027517	-0.036651	-1.9693E-05	537.3046291328042	56.098	0.91356	57.508	57.296	58.21	1.4099					92	36	4	0	0	0	0.033102	5	23450	23450;23498;23545;23592;23637		82.529	24.094	1	93049000			11362	3061	5662	5686	13804;13805;13806;13807;13808	13804					0.06167242776700732
IMLEALERV	9	Unmodified	_IMLEALERV_					0	0	0		nc|ENSG00000224543|A8MWD9|SNRPGP15;ENSG00000143977|ENST00000272348|SNRPG	nc|ENSG00000224543|A8MWD9|SNRPGP15	nc|ENSG00000224543|A8MWD9|SNRPGP15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3047363162041	2	537.30481	1072.59507	0.66672	0.00035823	-0.98289	-0.00052811	-0.31617	-0.00016988	537.3043954342867	55.576	0.59695	57.545	57.336	57.933	1.9684					76	26	4	0	0	0	0.036104	4	23289	23244;23289;23333;23374		79.596	25.219	1	105690000			11363	3061	5662	5686	13809;13810;13811;13812	13810					0.06167242776700732
IMLKARPARR	10	Unmodified	_IMLKARPARR_					0	0	0			REV__DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	REV__DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	405.1784850955009	3	404.588765	1210.74446	-0.27927	-0.00011299	1.8092	0.00073199	1.53	0.000619	404.5893901770033	26.765	1.2044	26.765	25.964	27.169	0					64	39	3	0	0	0	0.12547	1	11348	11348		0.69767	0	1	757700	+		11364	8425	5663	5687	13813	13813					0.14752232909995655
IMLLNKLYKF	10	Unmodified	_IMLLNKLYKF_					0	0	0			REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8835937380791	2	641.883227	1281.7519	1.4587	0.0009363	-0.4021	-0.0002581	1.0566	0.0006782	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	0.65574	2	33479	33432;33479		20.454	3.5347	1	9116700	+		11365	9646	5664	5688	13814;13815	13815					0.12229527667045659
IMMRSEQL	8	Unmodified	_IMMRSEQL_					0	0	0			REV__TBCA|p.P65R|1|0.67|ENSG00000171530|chr5:77693318-77693318|G/C|missense_variant	REV__TBCA|p.P65R|1|0.67|ENSG00000171530|chr5:77693318-77693318|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2549011111259	2	504.254262	1006.49397	4.5713	0.0023051	-2.2167	-0.0011178	2.3546	0.0011873	504.2527915465161	89.121	0.38055	90.525	90.264	90.645	1.4045					43	11	5	0	0	0	0.7006	1	37544	37544		30.225	1.738	1	3969600	+		11366	11033	5665	5689	13816	13816					-0.009015321976221458
IMNMKNQL	8	Oxidation (M)	_IMNM(Oxidation (M))KNQL_		IM(0.017)NM(0.983)KNQL		IM(-18)NM(18)KNQL	0	0	1			REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2553893923759	2	504.254262	1006.49397	5.4079	0.0027269	-3.1728	-0.0015999	2.2351	0.0011271	504.252270904091	89.542	0.43893	90.562	90.3	90.739	1.0199					51	13	6	0	0	0	0.47134	1	37693	37693		49.669	11.518	2	4535600	+		11367	14909	5666	5690	13817	13817		124			-0.009015321976335144
IMNMKNQL	8	Oxidation (M)	_IMNM(Oxidation (M))KNQL_					0	0	1			REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	504.254262	1006.49397	3.048	0.001537	-3.5057	-0.0017678	-0.45769	-0.00023079	504.2519630097624	90.383	0.3677	90.592	90.372	90.74	0.20903	-0.042418	-0.00044819	NaN	49.669	44	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3217700	+		11368	14909	5666	5690				124			-0.009015321976335144
IMNMKNQL	8	Oxidation (M)	_IMNM(Oxidation (M))KNQL_					0	0	1			REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.254262	1006.49397	5.4079	0.0027269	-3.1728	-0.0015999	2.2351	0.0011271	504.252270904091	89.542	0.43893	90.562	90.3	90.739	1.0199	-0.072064	-0.00011242	NaN	49.669	51	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4535600	+		11369	14909	5666	5690				124			-0.009015321976335144
IMNMKNQL	8	Oxidation (M)	_IMNM(Oxidation (M))KNQL_					0	0	1			REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	REV__tr|A0A553SJK8|A0A553SJK8_NIACIGTPcyclohydrolaseIIOS=NialliacirculansOX=1397GN=CEQ21_16965PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	504.254262	1006.49397	4.5713	0.0023051	-2.2167	-0.0011178	2.3546	0.0011873	504.2527915465161	89.121	0.38055	90.525	90.264	90.645	1.4045	-0.10907	0.00085175	NaN	49.669	43	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3969600	+		11370	14909	5666	5690				124			-0.009015321976335144
IMNQYVDIEKI	11	Unmodified	_IMNQYVDIEKI_					0	0	0		tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	683.3589355349541	2	683.35777	1364.70099	1.8247	0.0012469	-0.84252	-0.00057574	0.98221	0.0006712	683.3575366396797	68.076	0.73466	69.454	69.213	69.948	1.3778					46	23	3	0	0	0	0.88359	2	28585	28585;28637		10.8	0.64894	1	1397700			11371	16781	5667	5691	13818;13819	13818					0.03322533831533292
IMNQYVDIEKI	11	Unmodified	_IMNQYVDIEKI_					0	0	0		tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	tr|A0A7D6VQ12|A0A7D6VQ12_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01050PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	683.35777	1364.70099	1.1685	0.00079851	-1.1097	-0.0007583	0.058844	4.0211E-05	683.3573367621037	67.507	0.71046	69.377	69.147	69.858	1.87	-0.038482	-0.00024537	NaN	10.8	45	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1342000			11372	16781	5667	5691							0.03322533831533292
IMPEKFEFW	9	Unmodified	_IMPEKFEFW_					0	0	0		ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000173575|O14647-2|CHD2	ENSG00000173575|ENST00000394196|CHD2	ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.8004638552666	2	613.79936	1225.58417	1.7393	0.0010676	-0.82998	-0.00050944	0.9093	0.00055813	613.7996455043227	67.653	0.39216	69.031	68.85	69.242	1.3778					30	12	3	0	0	0	0.13873	1	28372	28372		39.957	13.074	1	2561200			11373	4288	5668	5692	13820	13820					-0.019601595975473174
IMPEKFEFW	9	Unmodified	_IMPEKFEFW_					0	0	0		ENSG00000173575|ENST00000394196|CHD2;nc|ENSG00000173575|O14647-2|CHD2	ENSG00000173575|ENST00000394196|CHD2	ENSG00000173575|ENST00000394196|CHD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.7989379763603	2	613.79936	1225.58417	1.1271	0.00069183	-0.26432	-0.00016224	0.86281	0.00052959	613.7993973139294	67.145	0.36701	69.034	68.828	69.195	1.8889					26	11	3	0	0	0	0.15635	1	28154	28154		37.974	8.8924	1	3076600			11374	4288	5668	5692	13821	13821					-0.019601595975473174
IMPIIGPH	8	Unmodified	_IMPIIGPH_					0	0	0			REV__ENST00000555173.1_1_12:57630374-57630868:-|nuORF	REV__ENST00000555173.1_1_12:57630374-57630868:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.2537719607353	2	439.251849	876.489145	2.6624	0.0011695	-0.17469	-7.6732E-05	2.4877	0.0010927	439.2514146861175	73.223	0.47614	73.548	73.34	73.816	0.32494					39	15	3	0	0	0	0.89176	1	30724	30724		0.79363	0	1	18127000	+		11375	11469	5669	5693	13822	13822					0.04595951721910296
IMPKTGFLI	9	Unmodified	_IMPKTGFLI_					0	0	0		MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant;ENSG00000198681|ENST00000356661|MAGEA1;ENSG00000197172|ENST00000329342|MAGEA6	MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant	MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3036987185478	2	510.301539	1018.58852	1.7596	0.00089791	3.0032	0.0015325	4.7628	0.0024304	510.30221679094836	55.163	0.34621	56.568	56.471	56.817	1.4049					20	11	2	0	0	0	0.34572	1	23136	23136		23.148	6.2061	1	1382400			11376	4986	5670	5694	13823	13823					0.07997349616016436
IMPKTGFLI	9	Unmodified	_IMPKTGFLI_					0	0	0		MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant;ENSG00000198681|ENST00000356661|MAGEA1;ENSG00000197172|ENST00000329342|MAGEA6	MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant	MAGEA1|p.I197N|1|0.1|ENSG00000198681|chrX:153182979-153182979|T/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	510.301539	1018.58852	1.6657	0.00085001	0.65899	0.00033628	2.3247	0.0011863	510.3018326139195	54.694	0.31398	56.663	56.495	56.809	1.9684	0.04738	-0.00086349	NaN	23.148	16	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1504200			11377	4986	5670	5694							0.07997349616016436
IMQSVTWTL	9	Unmodified	_IMQSVTWTL_					0	0	0		tr|A0A553SK71|A0A553SK71_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_18085PE=4SV=1	tr|A0A553SK71|A0A553SK71_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_18085PE=4SV=1	tr|A0A553SK71|A0A553SK71_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_18085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7856933474541	2	539.78371	1077.55287	2.6546	0.0014329	-0.24508	-0.00013229	2.4095	0.0013006	539.7832197077774	78.116	0.91212	79.396	78.949	79.862	1.2809					90	29	5	0	0	0	0.5697	1	32689	32689		12.532	0	1	8955600			11378	16274	5671	5695	13824	13824					0.017192673683439352
IMRDYIQKH	9	Unmodified	_IMRDYIQKH_					0	0	0		nc|ENSG00000108312|P17480-2|UBTF;ENSG00000108312|ENST00000436088|UBTF	nc|ENSG00000108312|P17480-2|UBTF	nc|ENSG00000108312|P17480-2|UBTF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1804382205009	3	401.881614	1202.62301	1.9109	0.00076794	-2.6095	-0.0010487	-0.69863	-0.00028077	402.2147306393385	40.592	0.25055	41.902	41.725	41.976	1.3102					11	7	2	0	0	0	0.11891	1	17025	17025		1.1933	0	1	1013900			11379	1629	5672	5696	13825	13825					0.029805657567976596
IMSELEECF	9	Unmodified	_IMSELEECF_					0	0	0			REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.7407104372978	2	550.735568	1099.45658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.28	1	93.216	92.716	93.716	0.93623								0	0	0	0.16797	1	38862	38862		28.487	4.4663	1		+		11380	8087	5673	5697	13826	13826					-0.08916668253891658
IMSLYIRVR	9	Unmodified	_IMSLYIRVR_					0	0	0		tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8442260622978	2	575.841894	1149.66923	3.3483	0.0019281	1.3546	0.00078004	4.7029	0.0027081	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.66839	1	31167	31167		8.5933	3.3626	1	7218900			11381	16702	5674	5698	13827	13827					0.10038630658914371
IMSLYIRVR	9	Unmodified	_IMSLYIRVR_					0	0	0		tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8442260622978	2	575.841894	1149.66923	2.788	0.0016055	1.4406	0.00082954	4.2286	0.002435	575.8424605894417	73.577	1.4663	75.373	74.434	75.9	1.7962					102	46	3	0	0	0	0.66839	1	30983	30983		8.5933	0.68312	1	6246000			11382	16702	5674	5698	13828	13828					0.10038630658914371
IMVAGFASVI	10	Unmodified	_IMVAGFASVI_					0	0	0		ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2816650271416	2	504.283346	1006.55214	1.8898	0.000953	-2.6927	-0.0013579	-0.80287	-0.00040487	504.2813247486795	78.263	0.80854	79.998	79.573	80.382	1.735					56	25	3	0	0	0	0.32206	1	32832	32832		37.974	3.8716	1	2064300			11383	5407	5675	5699	13829	13829					0.049124727192975115
IMVMHSVLL	9	Unmodified	_IMVMHSVLL_					0	0	0		ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	ENSG00000132518|ENST00000254854|GUCY2D	MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7991821169853	2	521.793023	1041.57149	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.058	1	90.114	89.614	90.614	1.0562								0	0	0	0.22015	1	37537	37537		24.674	0.65332	1				11384	2537	5676	5700	13830	13830					0.052371057385698805
INAAQENSPV	10	Unmodified	_INAAQENSPV_					0	0	0		nc|ENSG00000284762|O95263-2|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	522.3274413943291	2	521.76182	1041.50909	2.1036	0.0010976	0.78244	0.00040825	2.886	0.0015058	521.7622923946454	75.358	0.34774	75.358	75.154	75.502	0					17	10	2	0	0	0	0.12271	1	31381	31381		29.082	0	1	1279600			11385	1811	5677	5701	13831	13831					-0.010006258044313654
INAAQENSPV	10	Unmodified	_INAAQENSPV_					0	0	0		nc|ENSG00000284762|O95263-2|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	522.3277465701103	2	521.76182	1041.50909	2.7514	0.0014356	0.15214	7.9379E-05	2.9036	0.001515	521.7620566477713	74.897	0.37286	75.221	75.02	75.393	0.32464					23	11	3	0	0	0	0.1234	1	31342	31342		22.736	3.4793	1	2155800			11386	1811	5677	5701	13832	13832					-0.010006258044313654
INAAQENSPV	10	Unmodified	_INAAQENSPV_					0	0	0		nc|ENSG00000284762|O95263-2|PDE8B;nc|ENSG00000284762|O95263-6|PDE8B;nc|ENSG00000284762|O95263-4|PDE8B;ENSG00000113231|ENST00000264917|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	nc|ENSG00000284762|O95263-2|PDE8B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.3276244997978	2	521.76182	1041.50909	2.6259	0.0013701	1.8487	0.0009646	4.4747	0.0023347	521.7620761219152	73.419	0.43459	75.215	74.974	75.409	1.7962					27	13	3	0	0	0	0.10422	1	30796	30796		47.749	7.799	1	5348400			11387	1811	5677	5701	13833	13833					-0.010006258044313654
INAIRVTCPA	10	Unmodified	_INAIRVTCPA_					0	0	0		tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.2943603396416	2	529.294776	1056.575	2.626	0.0013899	-2.9372	-0.0015546	-0.31119	-0.00016471	529.293396464459	87.886	0.41676	87.886	87.671	88.088	0					36	13	4	0	0	0	0.89803	1	36785	36785		1.3295	0.13619	1	2574800			11388	16834	5678	5702	13834	13834					0.048974918367548526
INATYLKSK	9	Unmodified	_INATYLKSK_					0	0	0			REV__tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	REV__tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3047363162041	2	519.303124	1036.5917	3.4393	0.001786	-0.88462	-0.00045938	2.5547	0.0013267	519.3027534667699	74.527	0.4206	75.845	75.681	76.101	1.318					41	13	4	0	0	0	0.32838	1	31243	31243		24.021	0.87215	1	28846000	+		11389	15368	5679	5703	13835	13835					0.07486315994378856
INATYLKSK	9	Unmodified	_INATYLKSK_					0	0	0			REV__tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	REV__tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3040649294853	2	519.303124	1036.5917	3.0718	0.0015952	-0.76851	-0.00039909	2.3032	0.0011961	519.3028259057365	74.026	0.52002	75.823	75.657	76.177	1.7962					45	16	4	0	0	0	0.32838	1	31137	31137		24.021	3.5669	1	16318000	+		11390	15368	5679	5703	13836	13836					0.07486315994378856
INDAISLIL	9	Unmodified	_INDAISLIL_					0	0	0			REV__tr|A0A7D6ZRU6|A0A7D6ZRU6_9CLOTHDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13540PE=4SV=1	REV__tr|A0A7D6ZRU6|A0A7D6ZRU6_9CLOTHDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2923766970634	2	486.292225	970.569897	2.0336	0.00098893	0.86089	0.00041865	2.8945	0.0014076	486.29273007816954	69.121	1.1289	70.486	70.187	71.316	1.3657					81	36	5	0	0	0	0.053939	1	29087	29087		66.457	6.3828	1	132780000	+		11391	15695	5680	5704	13837	13837					0.08343511245811897
INDFDGDTEYK	11	Unmodified	_INDFDGDTEYK_					0	0	0		tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	658.7853881716728	2	658.785689	1315.55683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.789	1	33.789	33.289	34.289	0								0	0	0	0.63771	1	14160	14160		11.495	1.4208	1				11392	17214	5681	5705	13838	13838					-0.08833016394896731
INDFDGDTEYK	11	Unmodified	_INDFDGDTEYK_					0	0	0		tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	tr|A0A7D6ZZW1|A0A7D6ZZW1_9CLOTIg-likedomainrepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07825PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	658.7856323122978	2	658.785689	1315.55683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.642	1	34.642	34.142	35.142	0								0	0	0	0.63773	1	14521	14521		8.7454	0	1				11393	17214	5681	5705	13839	13839					-0.08833016394896731
INDGDEWTI	9	Unmodified	_INDGDEWTI_					0	0	0			REV__tr|A0A553SHV1|A0A553SHV1_NIACILipoproteinOS=NialliacirculansOX=1397GN=CEQ21_13680PE=4SV=1	REV__tr|A0A553SHV1|A0A553SHV1_NIACILipoproteinOS=NialliacirculansOX=1397GN=CEQ21_13680PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.3030883669853	2	531.740554	1061.46655	2.4768	0.001317	-3.2566	-0.0017317	-0.77984	-0.00041467	531.7379901110946	71.156	0.2659	72.497	72.392	72.658	1.3415					13	8	2	0	0	0	0.10339	1	29840	29840		14.838	0	1	1222300	+		11394	14820	5682	5706	13840	13840					-0.0617202093267224
INEINEYDGDY	11	Unmodified	_INEINEYDGDY_					0	0	0		tr|A0A7D6W064|A0A7D6W064_9CLOTClassISAM-dependentrRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22245PE=3SV=1	tr|A0A7D6W064|A0A7D6W064_9CLOTClassISAM-dependentrRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22245PE=3SV=1	tr|A0A7D6W064|A0A7D6W064_9CLOTClassISAM-dependentrRNAmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22245PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.7817870974541	2	672.783147	1343.55174	0.39183	0.00026361	-0.63923	-0.00043006	-0.2474	-0.00016645	672.7820482155918	17.776	0.1843	17.949	17.829	18.013	0.17285					7	5	2	0	0	0	0.93654	1	7383	7383		7.609	0.88579	1	350560			11395	17009	5683	5707	13841	13841					-0.10629320257521613
INFRRKQEASI	11	Unmodified	_INFRRKQEASI_					0	0	0			REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP	REV__nc|ENSG00000175727|Q9HAP2-4|MLXIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	681.3889037966728	2	681.386042	1360.75753	2.2188	0.0015119	-0.63882	-0.00043528	1.58	0.0010766	681.3855965263492	47.823	0.31295	47.823	47.653	47.966	0					27	9	4	0	0	0	0.85967	1	19950	19950		12.241	0	1	3007700	+		11396	8525	5684	5708	13842	13842					0.09158342503110362
INFYRPQEFFR	11	Unmodified	_INFYRPQEFFR_					0	0	0			REV__ENSG00000135912|ENST00000392102|TTLL4	REV__ENSG00000135912|ENST00000392102|TTLL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2635070681572	3	506.261371	1515.76228	0.7375	0.00037337	2.7097	0.0013718	3.4472	0.0017452	506.26260505759416	14.164	0.52376	14.164	13.949	14.473	0					42	16	4	0	0	0	1.0365	1	5849	5849		1.2148	0.2893	1	2759900	+		11397	9959	5685	5709	13843	13843					0.02503226645808354
INFYRPQEFFR	11	Unmodified	_INFYRPQEFFR_					0	0	0			REV__ENSG00000135912|ENST00000392102|TTLL4	REV__ENSG00000135912|ENST00000392102|TTLL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2619811892509	3	506.261371	1515.76228	0.2449	0.00012398	1.5828	0.00080131	1.8277	0.00092529	506.2620902339399	13.677	0.61894	14.403	13.977	14.596	0.72639					34	19	4	0	0	0	1.0365	1	5659	5659		1.2148	0	1	2299200	+		11398	9959	5685	5709	13844	13844					0.02503226645808354
INGLKRFKKKW	11	Unmodified	_INGLKRFKKKW_					0	0	0		tr|A0A553SG89|A0A553SG89_NIACIPolyprenylsynthetasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10395PE=4SV=1	tr|A0A553SG89|A0A553SG89_NIACIPolyprenylsynthetasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10395PE=4SV=1	tr|A0A553SG89|A0A553SG89_NIACIPolyprenylsynthetasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3008605837822	3	473.297868	1416.87177	3.5245	0.0016681	2.5944	0.0012279	6.1189	0.002896	473.2990970794242	96.922	0.15664	97.228	97.133	97.289	0.3062					14	4	4	0	0	0	1.0362	1	40766	40766		1.3296	0.70282	1	8041000			11399	16100	5686	5710	13845	13845					0.18001277055827813
INHEADETI	9	Unmodified	_INHEADETI_					0	0	0		tr|A0A553SHH0|A0A553SHH0_NIACILargeribosomalsubunitproteinbL25OS=NialliacirculansOX=1397GN=rplYPE=3SV=1	tr|A0A553SHH0|A0A553SHH0_NIACILargeribosomalsubunitproteinbL25OS=NialliacirculansOX=1397GN=rplYPE=3SV=1	tr|A0A553SHH0|A0A553SHH0_NIACILargeribosomalsubunitproteinbL25OS=NialliacirculansOX=1397GN=rplYPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	521.7148925662041	2	521.246003	1040.47745	1.4761	0.00076942	-3.6767	-0.0019165	-2.2006	-0.0011471	521.2436177164788	70.462	0.2453	70.784	70.647	70.892	0.32224					10	7	2	0	0	0	0.10844	1	29494	29494		16.942	4.4107	1	697100			11400	16152	5687	5711	13846	13846					-0.04116618558373375
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2686340212822	3	437.267463	1308.78056	1.1432	0.00049989	0.97119	0.00042467	2.1144	0.00092456	437.26771099798725	38.464	0.52911	38.464	38.208	38.737	0					33	23	2	0	0	0	1.0191	1	16046	16046		2.6312	0.72486	1	2050300	+		11401	10192	5688	5712	13847	13847					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2027160525322	4	328.202416	1308.78056	0.91284	0.0002996	0.20486	6.7235E-05	1.1177	0.00036683	328.2022976852947	37.526	0.48184	37.831	37.535	38.017	0.30497					62	19	4	0	0	0	1.0191	1	15753	15753		2.6312	0.19645	1	9882400	+		11402	10192	5688	5712	13848	13848					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2010681033134	4	328.202416	1308.78056	-0.66977	-0.00021982	0.66932	0.00021967	-0.00045375	-1.4892E-07	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	1.0191	1	15497	15497		2.6312	0.88896	1	30589000	+		11403	10192	5688	5712	13849	13849					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2017089724541	4	328.202416	1308.78056	0.20141	6.6102E-05	-1.6478	-0.00054082	-1.4464	-0.00047472	328.2013493106914	35.554	0.37152	37.372	37.159	37.531	1.8176					63	25	3	0	0	0	1.0191	1	14855	14855		2.6312	0.13275	1	10843000	+		11404	10192	5688	5712	13850	13850					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.4529296755791	4	328.202416	1308.78056	0.18251	5.9899E-05	-0.79086	-0.00025956	-0.60835	-0.00019966	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	1.0191	1	15218	15218		2.6312	0.72486	1	36142000	+		11405	10192	5688	5712	13851	13851					0.13851968567837503
INIKKITGLYF	11	Unmodified	_INIKKITGLYF_					0	0	0			REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	REV__ENST00000467953.5_1_1:93575811-93580308:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	437.267463	1308.78056	0.85211	0.0003726	-0.63461	-0.00027749	0.2175	9.5106E-05	437.6019984018721	36.706	0.099388	38.524	38.496	38.596	1.8176	0.14995	-0.00091059	NaN	2.6312	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1426000	+		11406	10192	5688	5712							0.13851968567837503
INIVKLIFKKF	11	Unmodified	_INIVKLIFKKF_					0	0	0			REV__tr|A0A553SHS4|A0A553SHS4_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13570PE=3SV=1	REV__tr|A0A553SHS4|A0A553SHS4_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13570PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.1489440798759	4	341.477246	1361.87988	-1.9209	-0.00065596	2.613	0.00089228	0.69205	0.00023632	341.72878037317776	30.529	0.64027	30.529	30.439	31.079	0					23	20	2	0	0	0	0.14606	1	12845	12845		0.094841	0.094841	1	375050	+		11407	14812	5689	5713	13852	13852					0.21341411252569742
INIVKLIFKKF	11	Unmodified	_INIVKLIFKKF_					0	0	0			REV__tr|A0A553SHS4|A0A553SHS4_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13570PE=3SV=1	REV__tr|A0A553SHS4|A0A553SHS4_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13570PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4776794314384	4	341.477246	1361.87988	0.1021	3.4866E-05	-0.58823	-0.00020087	-0.48613	-0.000166	341.47695092934583	24.582	1.4887	26.266	25.568	27.057	1.6845					182	49	5	0	0	0	1.0388	1	10496	10496		0.50596	0.41111	1	37959000	+		11408	14812	5689	5713	13853	13853					0.21341411252569742
INIVQEHL	8	Unmodified	_INIVQEHL_					0	0	0		tr|A0A7D6VMJ3|A0A7D6VMJ3_9CLOTClassIIfructose-bisphosphatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13935PE=4SV=1	tr|A0A7D6VMJ3|A0A7D6VMJ3_9CLOTClassIIfructose-bisphosphatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13935PE=4SV=1	tr|A0A7D6VMJ3|A0A7D6VMJ3_9CLOTClassIIfructose-bisphosphatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13935PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2783996462822	2	483.274367	964.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.918	1	52.918	52.418	53.418	0								0	0	0	1.0178	1	22068	22068		18.146	1.2041	1				11409	16713	5690	5714	13854	13854					0.05049473788801606
INKHPQISDCP	11	Unmodified	_INKHPQISDCP_					0	0	0			REV__nc|ENSG00000263956|Q86T75-2|NBPF11	REV__nc|ENSG00000263956|Q86T75-2|NBPF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.8757202029228	3	417.876529	1250.60776	-0.44017	-0.00018394	-1.5529	-0.00064892	-1.9931	-0.00083286	417.87583399482486	14.611	0.43223	14.611	14.442	14.874	0					35	13	4	0	0	0	0.92747	1	6066	6066		4.1166	0	1	2079800	+		11410	11991	5691	5715	13855	13855					-0.0075234583102883335
INKIHKILRE	10	Unmodified	_INKIHKILRE_					0	0	0		tr|A0A7D7ACM1|A0A7D7ACM1_9CLOTSporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19675PE=4SV=1	tr|A0A7D7ACM1|A0A7D7ACM1_9CLOTSporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19675PE=4SV=1	tr|A0A7D7ACM1|A0A7D7ACM1_9CLOTSporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19675PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	632.5267211794853	2	632.398422	1262.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.9	1	100.13	99.625	100.63	0.22545								0	0	0	0.66237	1	42016	42016		0.45834	0	1				11411	17320	5692	5716	13856	13856					0.16141022376427827
INKVLVPQR	9	Unmodified	_INKVLVPQR_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	356.2272827029228	3	356.229231	1065.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.076	1	37.353	36.853	37.853	1.2762								0	0	0	0.42693	1	15146	15146		4.5289	0.65253	1				11412	2700	5693	5717	13857	13857					0.1356570387656575
INLFKGITT	9	Unmodified	_INLFKGITT_					0	0	0		tr|A0A7D7A1W5|A0A7D7A1W5_9CLOTIS1595familytransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14105PE=4SV=1	tr|A0A7D7A1W5|A0A7D7A1W5_9CLOTIS1595familytransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14105PE=4SV=1	tr|A0A7D7A1W5|A0A7D7A1W5_9CLOTIS1595familytransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2042419314384	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.2	1	99.28	98.78	99.78	0.080376								0	0	0	0.42693	1	41531	41531		1.0715	0	1				11413	17245	5694	5718	13858	13858					0.08331217482702868
INLFKINV	8	Unmodified	_INLFKINV_					0	0	0		tr|A0A7D6VUU6|A0A7D6VUU6_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08455PE=3SV=1	tr|A0A7D6VUU6|A0A7D6VUU6_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08455PE=3SV=1	tr|A0A7D6VUU6|A0A7D6VUU6_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08455PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7980834841728	2	480.797478	959.580402	0.88558	0.00042579	0.025795	1.2402E-05	0.91138	0.00043819	480.7973070763008	56.489	0.36263	58.458	58.241	58.603	1.9684					30	11	3	0	0	0	0.5808	2	23639	23639;23686		42.095	0	1	8533900			11414	16955	5695	5719	13859;13860	13859					0.09899538690888221
INLIPAPSP	9	Unmodified	_INLIPAPSP_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.2737304568291	2	461.273835	920.533118	3.0076	0.0013873	-3.2038	-0.0014778	-0.19628	-9.0541E-05	461.27248952106834	75.635	0.26616	77.417	77.227	77.493	1.7817					23	8	4	0	0	0	0.83213	1	31737	31737		2.0598	0	1	2998100	+		11415	9904	5696	5720	13861	13861					0.06967259419900529
INLIPAPSP	9	Unmodified	_INLIPAPSP_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	461.273835	920.533118	2.7102	0.0012501	-1.5043	-0.00069387	1.2059	0.00055627	461.27302715633505	76.209	0.26469	77.503	77.281	77.546	1.2938	0.043306	0.00083231	NaN	2.0598	14	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4115600	+		11416	9904	5696	5720							0.06967259419900529
INLIPAPSP	9	Unmodified	_INLIPAPSP_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	461.273835	920.533118	3.0076	0.0013873	-3.2038	-0.0014778	-0.19628	-9.0541E-05	461.27248952106834	75.635	0.26616	77.417	77.227	77.493	1.7817	-0.043306	-0.00073563	NaN	2.0598	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2998100	+		11417	9904	5696	5720							0.06967259419900529
INLKIGEII	9	Unmodified	_INLKIGEII_					0	0	0			REV__tr|A0A553SNE7|A0A553SNE7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24320PE=4SV=1	REV__tr|A0A553SNE7|A0A553SNE7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8262817263603	2	506.823692	1011.63283	2.7004	0.0013686	0.46367	0.000235	3.1641	0.0016036	506.8239995926361	72.805	0.82402	74.615	74.353	75.177	1.8101					54	25	4	0	0	0	0.35546	1	30608	30608		24.021	0	1	7308600	+		11418	15052	5697	5721	13862	13862					0.12748077033870686
INLLRIIYR	9	Unmodified	_INLLRIIYR_					0	0	0		tr|A0A7D6ZVU0|A0A7D6ZVU0_9CLOTAlanineracemaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16295PE=4SV=1	tr|A0A7D6ZVU0|A0A7D6ZVU0_9CLOTAlanineracemaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16295PE=4SV=1	tr|A0A7D6ZVU0|A0A7D6ZVU0_9CLOTAlanineracemaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16295PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3801757693291	2	587.376958	1172.73936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.64	1	119.64	119.14	120.14	0								0	0	0	0.42693	1	51518	51518		1.8442	0	1				11419	17157	5698	5722	13863	13863					0.1599025231903397
INLTVYFG	8	Unmodified	_INLTVYFG_					0	0	0		ENSG00000213892|ENST00000587331|CEACAM16	ENSG00000213892|ENST00000587331|CEACAM16	ENSG00000213892|ENST00000587331|CEACAM16	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	3	309.504249	925.490919	-0.11787	-3.648E-05	3.0752	0.00095177	2.9573	0.00091529	309.5051492369603	23.706	0.22962	25.357	25.209	25.439	1.6511					13	7	2	0	0	0	2.3239	1	9918	9918		6.2058	2.6093	1	583620			11420	5231	5699	5723	13864	13864					0.025192840115323634
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1606628298759	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7654	1	1.9125	1.4125	2.4125	0.14703								0	0	0	0.66254	1	727	727		0.15932	0.064481	1		+		11421	8777	5700	5724	13865	13865					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1606933474541	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.89	1	4.5136	4.0136	5.0136	0.62362								0	0	0	0.66254	1	1605	1605		0.15932	0.064481	1		+		11422	8777	5700	5724	13866	13866					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1605407595634	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1084	1	4.732	4.232	5.232	0.62362								0	0	0	0.66254	1	1695	1695		0.15932	0.064481	1		+		11423	8777	5700	5724	13867	13867					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1604797244072	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4949	1	5.1162	4.6162	5.6162	0.62127								0	0	0	0.66254	1	1856	1856		0.15932	0.064481	1		+		11424	8777	5700	5724	13868	13868					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1605407595634	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9109	1	6.5322	6.0322	7.0322	0.62127								0	0	0	0.66254	1	2441	2441		0.15932	0.064481	1		+		11425	8777	5700	5724	13869	13869					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1607543826103	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8531	1	2.6015	2.1015	3.1015	0.7484								0	0	0	0.66254	1	767	767		0.15932	0.064481	1		+		11426	8777	5700	5724	13870	13870					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1608154177666	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4556	1	3.204	2.704	3.704	0.7484								0	0	0	0.66254	1	1019	1019		0.15932	0.064481	1		+		11427	8777	5700	5724	13871	13871					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1607238650322	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.586	1	6.3224	5.8224	6.8224	0.73642								0	0	0	0.66254	1	2317	2317		0.15932	0.064481	1		+		11428	8777	5700	5724	13872	13872					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1606628298759	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9271	1	6.6578	6.1578	7.1578	0.73074								0	0	0	0.66254	1	2458	2458		0.15932	0.064481	1		+		11429	8777	5700	5724	13873	13873					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1607849001884	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3221	1	7.0528	6.5528	7.5528	0.73074								0	0	0	0.66254	1	2622	2622		0.15932	0.064481	1		+		11430	8777	5700	5724	13874	13874					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605712771416	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5193	1	7.25	6.75	7.75	0.73074								0	0	0	0.66254	1	2705	2705		0.15932	0.064481	1		+		11431	8777	5700	5724	13875	13875					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605102419853	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1112	1	7.8419	7.3419	8.3419	0.73074								0	0	0	0.66254	1	2953	2953		0.15932	0.064481	1		+		11432	8777	5700	5724	13876	13876					-0.03250451733936188
INLYGCSAAA	10	Unmodified	_INLYGCSAAA_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605407595634	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7376	1	8.4684	7.9684	8.9684	0.73074								0	0	0	0.66254	1	3214	3214		0.15932	0.064481	1		+		11433	8777	5700	5724	13877	13877					-0.03250451733936188
INMRYLEYF	9	Unmodified	_INMRYLEYF_					0	0	0		nc|ENSG00000143643|Q8NBP0-2|TTC13;ENSG00000143643|ENST00000366661|TTC13;ENST00000471302.2_1_1:231047214-231057243:-|nuORF	nc|ENSG00000143643|Q8NBP0-2|TTC13	nc|ENSG00000143643|Q8NBP0-2|TTC13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	624.2375366091728	2	624.807716	1247.60088	2.0995	0.0013118	-2.8675	-0.0017916	-0.76803	-0.00047987	624.8058237449621	63.575	0.31876	65.519	65.279	65.598	1.9444					12	9	2	0	0	0	0.11908	1	26659	26659		2.0598	0.21551	1	637850			11434	3046	5701	5725	13878	13878					-0.01301658711622622
INMYHLKYWEQ	11	Unmodified	_INMYHLKYWEQ_					0	0	0			REV__ENSG00000166828|ENST00000300061|SCNN1G	REV__ENSG00000166828|ENST00000300061|SCNN1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.9148132205009	3	508.914983	1523.72312	1.0948	0.00055718	-0.73645	-0.00037479	0.3584	0.0001824	508.91454135647905	19.348	0.24857	20.407	20.291	20.54	1.0585					12	7	2	0	0	0	1.0388	1	8078	8078		0.50596	0	1	363210	+		11435	10841	5702	5726	13879	13879					-0.017792417000237037
INNAQERRI	9	Unmodified	_INNAQERRI_					0	0	0			REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3109619021416	2	557.309803	1112.60505	1.439	0.00080199	-1.7857	-0.00099518	-0.34664	-0.00019318	557.3095191078642	79.7	0.27705	81.417	81.229	81.506	1.7167					14	8	2	0	0	0	0.59203	1	33416	33416		11.64	1.5664	1	837630	+		11436	9696	5703	5727	13880	13880					0.05325566826309114
INNAQERRI	9	Unmodified	_INNAQERRI_					0	0	0			REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	557.309803	1112.60505	1.9508	0.0010872	-6.2212	-0.0034671	-4.2704	-0.0023799	557.3061896571236	81.094	0.24838	81.385	81.245	81.493	0.29056	-0.016257	-0.0014475	NaN	11.64	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	500720	+		11437	9696	5703	5727							0.05325566826309114
INNAQERRI	9	Unmodified	_INNAQERRI_					0	0	0			REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	REV__ENST00000483537.1_1_13:113777169-113784337:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	557.309803	1112.60505	1.439	0.00080199	-1.7857	-0.00099518	-0.34664	-0.00019318	557.3095191078642	79.7	0.27705	81.417	81.229	81.506	1.7167	0.016257	0.0034964	NaN	11.64	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	837630	+		11438	9696	5703	5727							0.05325566826309114
INNILQDI	8	Unmodified	_INNILQDI_					0	0	0		tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7681152224541	2	471.766374	941.518196	3.0483	0.0014381	0.26037	0.00012283	3.3086	0.0015609	471.76644663510984	62.355	0.31301	63.773	63.619	63.932	1.4177					22	9	3	0	0	0	0.62161	1	26178	26178		38.151	4.0487	1	1843200			11439	17127	5704	5728	13881	13881					0.04509767551905952
INPHYFFSA	9	Unmodified	_INPHYFFSA_					0	0	0			REV__tr|A0A7D7A633|A0A7D7A633_9CLOTDUF2334domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08770PE=4SV=1	REV__tr|A0A7D7A633|A0A7D7A633_9CLOTDUF2334domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.8458129763603	3	365.846787	1094.51853	-1.8822	-0.00068859	-1.0987	-0.00040197	-2.9809	-0.0010906	365.84642479169776	15.63	0.52839	15.63	15.374	15.902	0					53	16	5	0	0	0	0.16939	2	6469	6469;6520		36.506	6.6656	1	16388000	+		11440	15888	5705	5729	13882;13883	13882					-0.024948127282414134
INPHYFFSA	9	Unmodified	_INPHYFFSA_					0	0	0			REV__tr|A0A7D7A633|A0A7D7A633_9CLOTDUF2334domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08770PE=4SV=1	REV__tr|A0A7D7A633|A0A7D7A633_9CLOTDUF2334domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.8454467654228	3	365.846787	1094.51853	0.13515	4.9443E-05	-3.5627	-0.0013034	-3.4275	-0.0012539	365.8455002375654	15.552	0.40783	15.682	15.525	15.933	0.13022					34	12	4	0	0	0	0.40005	1	6477	6477		20.415	2.0414	1	2836200	+		11441	15888	5705	5729	13884	13884					-0.024948127282414134
INPSQNQRLC	10	Unmodified	_INPSQNQRLC_					0	0	0		HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|89|3|sense	HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|89|3|sense	HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7958251833916	2	586.795672	1171.57679	1.9169	0.0011248	-1.709	-0.0010029	0.20784	0.00012196	586.7955123652664	70.307	0.37685	72.145	71.914	72.291	1.8378					24	11	3	0	0	0	0.77604	1	29478	29478		14.838	3.198	1	1224300			11442	7653	5706	5730	13885	13885					-0.0021349914525217173
INRTHYII	8	Unmodified	_INRTHYII_					0	0	0		sp|Q6SWC8|UL01_HCMVMGlycoproteinUL1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL1PE=3SV=1	sp|Q6SWC8|UL01_HCMVMGlycoproteinUL1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL1PE=3SV=1	sp|Q6SWC8|UL01_HCMVMGlycoproteinUL1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL1PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	515.2942382693291	2	515.295633	1028.57671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.895	1	97.986	97.486	98.486	0.090881								0	0	0	1.0178	1	40961	40961		8.5933	3.8373	1				11443	16003	5707	5731	13886	13886					0.06356868917032443
INRTPSRLLKE	11	Unmodified	_INRTPSRLLKE_					0	0	0		ENSG00000130035|ENST00000252318|GALNT8	ENSG00000130035|ENST00000252318|GALNT8	ENSG00000130035|ENST00000252318|GALNT8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	442.2603027224541	3	442.933254	1325.77793	1.976	0.00087523	-0.94978	-0.00042069	1.0262	0.00045454	442.9330329989437	83.529	2.1086	83.529	82.8	84.909	0					102	67	2	0	0	0	0.14606	1	35161	35161		1.2148	0.4383	1	1900900			11444	2415	5708	5732	13887	13887					0.12807513162874784
INRTPSRLLKE	11	Unmodified	_INRTPSRLLKE_					0	0	0		ENSG00000130035|ENST00000252318|GALNT8	ENSG00000130035|ENST00000252318|GALNT8	ENSG00000130035|ENST00000252318|GALNT8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	442.933254	1325.77793	2.7565	0.0012209	-1.433	-0.00063473	1.3235	0.00058621	442.9328574281339	82.935	0.48962	83.205	82.878	83.368	0.27029	-0.16182	-0.00031698	NaN	1.2148	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1450900			11445	2415	5708	5732							0.12807513162874784
INSLAIFSV	9	Unmodified	_INSLAIFSV_					0	0	0			REV__tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	REV__tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2785522341728	2	482.279118	962.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.271	1	39.568	39.068	40.068	1.2961								0	0	0	0.10042	1	16059	16059		34.402	7.5181	1		+		11446	15871	5709	5733	13888	13888					0.06091242074330694
INTEKLDHLF	10	Unmodified	_INTEKLDHLF_					0	0	0			REV__ENSG00000018510|ENST00000264167|AGPS	REV__ENSG00000018510|ENST00000264167|AGPS	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.5612975955009	3	410.555672	1228.64519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.625	1	45.991	45.491	46.491	1.3653								0	0	0	0.56103	1	18705	18705		22.775	1.9038	1		+		11447	8550	5710	5734	13889	13889					0.04001068706224942
INTPLWPCD	9	Unmodified	_INTPLWPCD_					0	0	0		ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	530.2942993044853	2	529.75241	1057.49027	2.3171	0.0012275	-0.14043	-7.4393E-05	2.1767	0.0011531	529.7515589269833	63.978	0.53855	65.385	64.958	65.497	1.4071					27	16	2	0	0	0	0.071872	1	26745	26745		30.637	14.789	1	1211200			11448	4299	5711	5735	13890	13890					-0.036178786998334544
INVALAAQAR	10	Unmodified	_INVALAAQAR_					0	0	0			REV__nc|ENSG00000146731|P40227-2|CCT6A	REV__nc|ENSG00000146731|P40227-2|CCT6A	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.2093688845634	3	342.873336	1025.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.69	1	36.507	36.007	37.007	1.8176								0	0	0	0.65894	1	14544	14544		3.3196	1.0369	1		+		11449	10310	5712	5736	13891	13891					0.08640253945759468
INVKQKTQS	9	Unmodified	_INVKQKTQS_					0	0	0			REV__MYO1B|p.L1089V|1|0.04|ENSG00000128641|chr2:191416220-191416220|C/G|missense_variant	REV__MYO1B|p.L1089V|1|0.04|ENSG00000128641|chr2:191416220-191416220|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3046752810478	2	523.303655	1044.59276	1.4904	0.00077995	0.051481	2.694E-05	1.5419	0.00080689	523.3038467566931	70.036	2.0531	70.359	69.344	71.397	0.32224					160	65	3	0	0	0	0.84195	1	29312	29312		1.6526	0	1	4121700	+		11450	14370	5713	5737	13892	13892					0.07224530363305348
INVLLLPII	9	Unmodified	_INVLLLPII_					0	0	0		tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.1780883669853	3	336.566961	1006.67905	-0.036917	-1.2425E-05	-1.9315	-0.00065008	-1.9684	-0.0006625	336.5668861180274	22.955	0.4636	24.17	23.948	24.412	1.2145					21	14	2	0	0	0	0.11938	1	9633	9633		0.26902	0.26902	1	388920			11451	16817	5714	5738	13893	13893					0.175981419359573
INVLRIGVTRQ	11	Unmodified	_INVLRIGVTRQ_					0	0	0		tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.5985595583916	3	423.598094	1267.77245	0.93723	0.00039701	0.076208	3.2282E-05	1.0134	0.00042929	423.59812200535475	94.407	0.58418	94.407	94.087	94.671	0					63	17	5	0	0	0	1.0224	1	39509	39509		2.4348	0.18206	1	35375000			11452	16194	5715	5739	13894	13894					0.1492783437106482
INVLRIGVTRQ	11	Unmodified	_INVLRIGVTRQ_					0	0	0		tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	tr|A0A553SIF5|A0A553SIF5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14700PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.5986816287041	3	423.598094	1267.77245	4.1516	0.0017586	-2.0366	-0.00086269	2.1151	0.00089593	423.59720599206855	93.597	0.57309	94.468	94.194	94.767	0.87176					55	17	5	0	0	0	1.0224	1	39376	39376		2.4348	0.69251	1	13232000			11453	16194	5715	5739	13895	13895					0.1492783437106482
INVQILPKGNR	11	Unmodified	_INVQILPKGNR_					0	0	0			REV__tr|A0A553STI6|A0A553STI6_NIACIGer(X)CfamilysporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_04950PE=3SV=1	REV__tr|A0A553STI6|A0A553STI6_NIACIGer(X)CfamilysporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_04950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	626.3809081912041	2	626.380229	1250.7459	2.5883	0.0016212	-0.34037	-0.0002132	2.2479	0.001408	626.3798274467554	94.227	0.46984	94.372	94.165	94.635	0.14493					48	14	4	0	0	0	1.0391	1	39498	39498		1.1933	0.12188	1	10307000	+		11454	15242	5716	5740	13896	13896					0.13056145479754377
INWRPRTPA	9	Unmodified	_INWRPRTPA_					0	0	0			REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	REV__ENST00000491449.5_1_22:50658476-50664613:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8123046755791	2	555.811982	1109.60941	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5581	1	5.5581	5.0581	6.0581	0								0	0	0	0.42693	1	2282	2282		2.0598	0.57785	1		+		11455	9725	5717	5741	13897	13897					0.0589907603989559
IPAAFGLAV	9	Unmodified	_IPAAFGLAV_					0	0	0		tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	tr|A0A7D7A1X1|A0A7D7A1X1_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06090PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.7588378787041	2	429.757821	857.501089	1.9188	0.00082462	0.54138	0.00023266	2.4602	0.0010573	429.75768702551585	67.426	0.40207	68.804	68.575	68.977	1.3778					18	12	2	0	0	0	0.24585	1	28308	28308		28.173	7.302	1	2271600			11456	17246	5718	5742	13898	13898					0.06663891736752703
IPADIVFVL	9	Unmodified	_IPADIVFVL_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1;DNAJB1|p.D287Rfs*31|1|0.04|ENSG00000132002|chr19:14516105-14516106|-/C|frameshift_variant;ENST00000429417.1_1_2:192746108-192746309:-|nuORF;nc|ENSG00000137094|O75953|DNAJB5;ENSG00000137094|ENST00000682809|DNAJB5;nc|ENSG00000137094|O75953-5|DNAJB5;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8012878298759	2	493.799686	985.584819	4.1755	0.0020619	-1.2796	-0.00063184	2.8959	0.00143	493.7994770211541	92.422	0.48997	93.358	93.082	93.572	0.93623					26	14	2	0	0	0	0.49082	1	38913	38913		15.847	2.3393	1	1112700			11457	2510;418	5719	5743	13899	13899					0.09145003113803796
IPADIVFVL	9	Unmodified	_IPADIVFVL_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1;DNAJB1|p.D287Rfs*31|1|0.04|ENSG00000132002|chr19:14516105-14516106|-/C|frameshift_variant;ENST00000429417.1_1_2:192746108-192746309:-|nuORF;nc|ENSG00000137094|O75953|DNAJB5;ENSG00000137094|ENST00000682809|DNAJB5;nc|ENSG00000137094|O75953-5|DNAJB5;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.5939819216728	1	986.592096	985.584819	3.6284	0.0035798	-3.1956	-0.0031528	0.43281	0.000427	986.5879547209353	91.933	0.35175	93.26	93.086	93.438	1.3269					19	10	3	0	0	0	0.051699	1	38713	38713		67.344	9.8725	1	2923200			11458	2510;418	5719	5743	13900	13900					0.09145003113803796
IPAFVIIFLP	10	Unmodified	_IPAFVIIFLP_					0	0	0			REV__tr|A0A553SFE2|A0A553SFE2_NIACIPeptideMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08705PE=3SV=1	REV__tr|A0A553SFE2|A0A553SFE2_NIACIPeptideMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08705PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	376.7571899294853	3	377.238844	1128.6947	1.054	0.0003976	-3.0256	-0.0011414	-1.9716	-0.00074377	377.2374650929808	43.55	0.30577	44.904	44.765	45.071	1.3536					17	9	2	0	0	0	0.12424	1	18289	18289		20.415	3.8487	1	3562600	+		11459	14704	5720	5744	13901	13901					0.13550428453004315
IPAGGVLTL	9	Unmodified	_IPAGGVLTL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5;nc|ENSG00000105281|Q15758-3|SLC1A5;nc|ENSG00000105281|Q15758-2|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5225097537041	1	840.518931	839.511654	2.4727	0.0020783	-0.0013345	-1.1217E-06	2.4714	0.0020772	840.5188398922982	60.159	0.51244	61.579	61.39	61.903	1.4196					29	16	2	0	0	0	0.030843	2	25243	25189;25243		86.121	19.086	1	1041600			11460	1507	5721	5745	13902;13903	13903					0.08547874391183541
IPAGGVLTL	9	Unmodified	_IPAGGVLTL_					0	0	0		ENSG00000105281|ENST00000542575|SLC1A5;nc|ENSG00000105281|Q15758-3|SLC1A5;nc|ENSG00000105281|Q15758-2|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	ENSG00000105281|ENST00000542575|SLC1A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5197021365166	1	840.518931	839.511654	2.6831	0.0022552	0.055768	4.6874E-05	2.7388	0.002302	840.5194063546571	59.619	0.42129	61.588	61.466	61.887	1.969					20	13	2	0	0	0	0.052478	2	25019	25019;25112		67.035	17.366	1	1029700			11461	1507	5721	5745	13904;13905	13904					0.08547874391183541
IPAMMIPHLLV	11	Unmodified	_IPAMMIPHLLV_					0	0	0		tr|A0A7D6VQX9|A0A7D6VQX9_9CLOTCobalttransporterCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=4SV=1	tr|A0A7D6VQX9|A0A7D6VQX9_9CLOTCobalttransporterCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=4SV=1	tr|A0A7D6VQX9|A0A7D6VQX9_9CLOTCobalttransporterCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	617.3077880740166	2	617.856155	1233.69776	2.4103	0.0014892	-0.99315	-0.00061362	1.4171	0.00087559	617.8554151232886	65.512	0.24644	66.911	66.788	67.034	1.3989					10	7	2	0	0	0	0.14493	1	27517	27517		3.5965	1.7523	1	357750			11462	16812	5722	5746	13906	13906					0.09025612243840442
IPCSASFNTL	10	Unmodified	_IPCSASFNTL_					0	0	0			REV__ENSG00000168131|ENST00000303324|OR2B2	REV__ENSG00000168131|ENST00000303324|OR2B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7632324099541	2	526.757692	1051.50083	2.1552	0.0011353	0.26797	0.00014115	2.4232	0.0012764	526.7582094775263	68.344	0.56818	70.214	69.858	70.426	1.87					52	17	4	0	0	0	0.75645	1	28735	28735		15.847	1.0089	1	5949800	+		11463	10896	5723	5747	13907	13907					-0.0228589604539593
IPDELVIKL	9	Unmodified	_IPDELVIKL_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;nc|ENSG00000155085|Q5TCS8-2|AK9;nc|ENSG00000155085|Q5TCS8-1|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3248168826103	2	520.323525	1038.6325	2.3955	0.0012464	1.3153	0.00068438	3.7108	0.0019308	520.3241489672662	63.565	0.49548	64.979	64.816	65.311	1.4134					34	15	3	0	0	0	0.066197	2	26657	26657;26725		61.602	17.327	1	4555400			11464	3407	5724	5748	13908;13909	13908					0.11472657313993295
IPDELVIKL	9	Unmodified	_IPDELVIKL_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-3|AK9;nc|ENSG00000155085|Q5TCS8-2|AK9;nc|ENSG00000155085|Q5TCS8-1|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3249389529228	2	520.323525	1038.6325	2.2471	0.0011692	1.3249	0.0006894	3.572	0.0018586	520.3243128488908	63.034	0.40123	64.978	64.782	65.183	1.9444					29	12	4	0	0	0	0.043696	1	26423	26423		72.968	12.894	1	4022000			11465	3407	5724	5748	13910	13910					0.11472657313993295
IPDEQIVVM	9	Unmodified	_IPDEQIVVM_					0	0	0		ENST00000557694.1_1_14:93182479-93199131:-|nuORF;LGMN|p.K248*|1|0.14|ENSG00000100600|chr14:92711737-92711738|-/C|frameshift_variant;LGMN|p.T247Nfs*22|1|0.13|ENSG00000100600|chr14:92711738-92711739|-/CTTGGGTTTCAACCAATGAGAAAACAAAT|frameshift_variant;nc|ENSG00000100600|Q99538-3|LGMN;nc|ENSG00000100600|Q99538-2|LGMN;ENSG00000100600|ENST00000334869|LGMN	ENST00000557694.1_1_14:93182479-93199131:-|nuORF	ENST00000557694.1_1_14:93182479-93199131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2759887576103	2	522.275718	1042.53688	1.1101	0.00057977	-1.3802	-0.00072085	-0.27014	-0.00014109	522.2755742324708	54.701	0.696	56.67	56.409	57.105	1.9684					72	23	5	0	0	0	0.17276	1	23016	23016		36.127	5.4905	1	8939400			11466	1292	5725	5749	13911	13911					0.017315611314415946
IPDQLGYLVL	10	Unmodified	_IPDQLGYLVL_					0	0	0		ENST00000474831.5_1_7:99746595-99751042:+|nuORF;ENST00000473459.5_1_7:99747130-99750374:+|nuORF;ENSG00000188186|ENST00000341942|LAMTOR4	ENST00000474831.5_1_7:99746595-99751042:+|nuORF	ENST00000474831.5_1_7:99746595-99751042:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8267089724541	2	565.826432	1129.63831	1.5209	0.00086058	-1.3346	-0.00075517	0.18629	0.00010541	565.8259006519576	84.02	0.31999	85.208	85.05	85.37	1.1879					18	10	2	0	0	0	0.34658	1	35247	35247		36.506	0.37917	1	2267200			11467	4852	5726	5750	13912	13912					0.0786775582566861
IPDWEAHLV	9	Unmodified	_IPDWEAHLV_					0	0	0			REV__ENST00000529821.5_1_11:6587803-6593213:+|nuORF	REV__ENST00000529821.5_1_11:6587803-6593213:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	539.7892944216728	2	540.279649	1078.54475	1.8031	0.0009742	-0.69434	-0.00037514	1.1088	0.00059906	540.2797436420718	43.628	0.22152	43.952	43.803	44.024	0.32389					10	6	2	0	0	0	0.11645	1	18259	18259		8.5933	0	1	422510	+		11468	11279	5727	5751	13913	13913					0.008614564432036786
IPEAALLVL	9	Unmodified	_IPEAALLVL_					0	0	0		ENSG00000105726|ENST00000357324|ATP13A1;ENST00000487364.1_1_19:19771386-19774475:-|nuORF	ENSG00000105726|ENST00000357324|ATP13A1	ENSG00000105726|ENST00000357324|ATP13A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	938.6041747927666	1	938.592096	937.584819	2.2484	0.0021103	-0.69751	-0.00065468	1.5509	0.0014557	938.5894087989091	83.298	0.25329	84.486	84.388	84.642	1.1879					9	7	2	0	0	0	0.021906	1	34991	34991		54.774	8.7526	1	805290			11469	1539	5728	5752	13914	13914					0.11353003113799787
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7966186404228	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.854	1	89.91	89.41	90.41	1.0562								0	0	0	0.019937	1	37454	37454		89.427	0	1				11470	5009	5729	5753	13915	13915					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7971069216728	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.952	1	90.008	89.508	90.508	1.0562								0	0	0	0.036752	1	37494	37494		67.344	0	1				11471	5009	5729	5753	13916	13916					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7911865115166	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.262	1	90.281	89.781	90.781	1.0199								0	0	0	0.32813	1	37619	37619		15.847	0	1				11472	5009	5729	5753	13917	13917					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7966186404228	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.372	1	89.819	89.319	90.319	1.4467								0	0	0	0.04443	1	37245	37245		50.855	0	1				11473	5009	5729	5753	13918	13918					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7980224490166	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.497	1	89.944	89.444	90.444	1.4467								0	0	0	0.036752	1	37296	37296		67.344	0	1				11474	5009	5729	5753	13919	13919					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7977783083916	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.593	1	90.04	89.54	90.54	1.4467								0	0	0	0.04443	1	37334	37334		50.855	0	1				11475	5009	5729	5753	13920	13920					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7996093630791	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.702	1	90.149	89.649	90.649	1.4467								0	0	0	0.061573	1	37378	37378		42.095	0	1				11476	5009	5729	5753	13921	13921					0.055523953885767696
IPEDLPFVL	9	Unmodified	_IPEDLPFVL_					0	0	0		nc|ENSG00000197479|Q9Y5F2-2|PCDHB11;ENSG00000197479|ENST00000354757|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	nc|ENSG00000197479|Q9Y5F2-2|PCDHB11	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7955200076103	2	521.794601	1041.57465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.83	1	90.276	89.776	90.776	1.4467								0	0	0	0.32813	1	37430	37430		15.847	0	1				11477	5009	5729	5753	13922	13922					0.055523953885767696
IPEDVSGLVSL	11	Unmodified	_IPEDVSGLVSL_					0	0	0		nc|ENSG00000108061|Q9UQ13-2|SHOC2;ENSG00000108061|ENST00000369452|SHOC2	nc|ENSG00000108061|Q9UQ13-2|SHOC2	nc|ENSG00000108061|Q9UQ13-2|SHOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8090698122978	2	564.810979	1127.6074	1.52	0.00085853	-3.412	-0.0019271	-1.8919	-0.0010686	564.8111681516881	68.757	0.45203	70.61	70.346	70.798	1.853					41	14	4	0	0	0	0.77451	1	28790	28790		16.149	0.90062	1	4083200			11478	1620	5730	5754	13923	13923					0.04870557720778379
IPEEILGKITL	11	Unmodified	_IPEEILGKITL_					0	0	0		ENST00000582377.1_1_17:11998936-12013832:+|nuORF;ENST00000602537.5_1_17:11984679-12043167:+|nuORF;ENSG00000065559|ENST00000353533|MAP2K4;nc|ENSG00000065559|P45985-2|MAP2K4	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3759643435478	2	613.373746	1224.73294	1.8111	0.0011109	-0.69482	-0.00042619	1.1163	0.00068472	613.3737303239433	67.762	0.3575	69.139	69.007	69.364	1.3778					25	11	3	0	0	0	0.003177	1	28442	28442		129.39	70.02	1	2171700			11479	789	5731	5755	13924	13924					0.1295626957701188
IPEEILGKITL	11	Unmodified	_IPEEILGKITL_					0	0	0		ENST00000582377.1_1_17:11998936-12013832:+|nuORF;ENST00000602537.5_1_17:11984679-12043167:+|nuORF;ENSG00000065559|ENST00000353533|MAP2K4;nc|ENSG00000065559|P45985-2|MAP2K4	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	ENST00000582377.1_1_17:11998936-12013832:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3738891482353	2	613.373746	1224.73294	1.1287	0.00069234	0.1948	0.00011949	1.3235	0.00081182	613.3743271340705	67.24	0.33186	69.128	68.986	69.318	1.8889					25	10	3	0	0	0	0.017341	1	28205	28205		101.12	45.881	1	1881700			11480	789	5731	5755	13925	13925					0.1295626957701188
IPEEILGKVSI	11	Unmodified	_IPEEILGKVSI_					0	0	0		ENST00000597008.5_1_19:4100806-4102439:-|nuORF;ENSG00000126934|ENST00000262948|MAP2K2	ENST00000597008.5_1_19:4100806-4102439:-|nuORF	ENST00000597008.5_1_19:4100806-4102439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3597289919853	2	599.358096	1196.70164	1.0168	0.00060943	0.47358	0.00028384	1.4904	0.00089327	599.3587997627337	58.464	0.34267	59.882	59.692	60.035	1.4181					25	10	3	0	0	0	0.0021729	2	24550	24498;24550		129.39	81.798	1	6602100			11481	2325	5732	5756	13926;13927	13927					0.11115696542901787
IPEEILGKVSI	11	Unmodified	_IPEEILGKVSI_					0	0	0		ENST00000597008.5_1_19:4100806-4102439:-|nuORF;ENSG00000126934|ENST00000262948|MAP2K2	ENST00000597008.5_1_19:4100806-4102439:-|nuORF	ENST00000597008.5_1_19:4100806-4102439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.8595458865166	2	599.358096	1196.70164	0.78525	0.00047064	0.78779	0.00047217	1.573	0.00094281	599.3585234973729	57.917	0.41914	59.886	59.729	60.148	1.969					21	13	2	0	0	0	0.003177	2	24288	24288;24346		129.39	66.197	1	3598100			11482	2325	5732	5756	13928;13929	13928					0.11115696542901787
IPENVDITL	9	Unmodified	_IPENVDITL_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1013.55528563261	1	1013.55135	1012.54408	1.2882	0.0013056	0.58005	0.00058791	1.8682	0.0018936	1013.551806137823	58.794	0.98433	60.212	59.877	60.861	1.4181					83	31	4	0	0	0	0.0033884	6	24565	24565;24611;24649;24702;24757;24814		126.57	29.115	1	10391000			11483	3714	5733	5757	13930;13931;13932;13933;13934;13935	13930					0.03830617003529824
IPENVDITL	9	Unmodified	_IPENVDITL_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2798950076103	2	507.279315	1012.54408	2.0313	0.0010305	1.743	0.00088418	3.7743	0.0019146	507.78190681491725	58.736	1.2961	60.154	59.909	61.205	1.4181					78	41	3	0	0	0	0.019432	1	24680	24680		99.799	21.071	1	11402000			11484	3714	5733	5757	13936	13936					0.03830617003529824
IPENVDITL	9	Unmodified	_IPENVDITL_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1013.553515613079	1	1013.55135	1012.54408	1.5201	0.0015407	0.11834	0.00011994	1.6384	0.0016606	1013.5514753751356	58.356	1.2309	60.325	59.931	61.162	1.969					93	39	4	0	0	0	0.0022704	7	24479	24358;24403;24440;24479;24533;24586;24656		129.77	26.767	1	12667000			11485	3714	5733	5757	13937;13938;13939;13940;13941;13942;13943	13940					0.03830617003529824
IPENVDITL	9	Unmodified	_IPENVDITL_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000514842.5_1_4:39459094-39460113:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2797119021416	2	507.279315	1012.54408	1.4796	0.00075056	2.2259	0.0011291	3.7055	0.0018797	507.2795887907629	58.099	0.88167	60.068	59.962	60.844	1.969					65	28	3	0	0	0	0.019432	3	24494	24377;24494;24545		99.799	17.909	1	14737000			11486	3714	5733	5757	13944;13945;13946	13945					0.03830617003529824
IPFEFPLHL	9	Unmodified	_IPFEFPLHL_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C;ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8118163943291	2	556.810585	1111.60662	1.9304	0.0010748	0.76994	0.00042871	2.7003	0.0015036	556.8106719377996	84.617	0.46825	85.776	85.527	85.995	1.159					37	14	4	0	0	0	0.0017386	3	35504	35457;35504;35562		131.3	67.735	1	6694700			11487	3475	5734	5758	13947;13948;13949	13948					0.055278078623587135
IPFEFPLHL	9	Unmodified	_IPFEFPLHL_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C;ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8127319216728	2	556.810585	1111.60662	2.0483	0.0011405	0.44856	0.00024976	2.4968	0.0013903	556.8108427045809	84.127	0.3423	85.765	85.559	85.901	1.6379					24	10	3	0	0	0	0.0082953	2	35301	35253;35301		109.63	62.708	1	6602200			11488	3475	5734	5758	13950;13951	13951					0.055278078623587135
IPFIRPLRDWL	11	Unmodified	_IPFIRPLRDWL_					0	0	0		nc|ENSG00000172795|Q8IU60-2|DCP2;ENSG00000172795|ENST00000389063|DCP2;ENST00000512751.5_1_5:112312677-112343644:+|nuORF;ENST00000508359.1_1_5:112336867-112343781:+|nuORF	nc|ENSG00000172795|Q8IU60-2|DCP2	nc|ENSG00000172795|Q8IU60-2|DCP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1996642947197	3	475.950357	1424.82924	1.9462	0.00092629	3.6567	0.0017404	5.6029	0.0026667	476.2859993323878	96.972	0.70434	96.972	96.772	97.477	0					28	22	2	0	0	0	0.14606	1	40684	40684		1.4551	0	1	1170400			11489	4252	5735	5759	13952	13952					0.13381881927625727
IPFKGRLAQ	9	Unmodified	_IPFKGRLAQ_					0	0	0		ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.3121215701103	2	515.313826	1028.6131	1.9806	0.0010206	-4.4486	-0.0022924	-2.4679	-0.0012718	515.3128672920644	73.07	0.37629	73.07	72.872	73.248	0					28	11	3	0	0	0	0.44535	2	30408	30408;30456		18.135	1.1927	1	3411700			11490	7089	5736	5760	13953;13954	13953					0.09993745813744681
IPFKGRLAQ	9	Unmodified	_IPFKGRLAQ_					0	0	0		ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.3118774294853	2	515.313826	1028.6131	2.153	0.0011095	-4.3714	-0.0022527	-2.2184	-0.0011432	515.3123291585076	72.613	0.4081	72.938	72.674	73.082	0.32494					34	12	4	0	0	0	0.44535	1	30333	30333		18.135	3.5533	1	2366900			11491	7089	5736	5760	13955	13955					0.09993745813744681
IPFKGRLAQ	9	Unmodified	_IPFKGRLAQ_					0	0	0		ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	ENST00000521994.1_1_8:19796804-19809252:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.313826	1028.6131	1.8751	0.00096625	-6.6392	-0.0034212	-4.7641	-0.002455	515.3104100290484	71.797	0.1221	73.138	73.061	73.184	1.3415	0.089443	-0.0013704	NaN	18.135	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	458320			11492	7089	5736	5760							0.09993745813744681
IPFPLSLSL	9	Unmodified	_IPFPLSLSL_					0	0	0			REV__ENSG00000175809|ENST00000323684|CBLL2	REV__ENSG00000175809|ENST00000323684|CBLL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8024780154228	2	493.799686	985.584819	4.1919	0.0020699	-1.2789	-0.00063152	2.913	0.0014384	493.7997949437048	93.338	0.41885	94.21	93.998	94.417	0.87176					18	12	2	0	0	0	0.078975	1	39281	39281		56.541	2.9657	1	1161900	+		11493	11161	5737	5761	13956	13956					0.09145003113803796
IPFPLSLSL	9	Unmodified	_IPFPLSLSL_					0	0	0			REV__ENSG00000175809|ENST00000323684|CBLL2	REV__ENSG00000175809|ENST00000323684|CBLL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.799686	985.584819	4.1919	0.0020699	-1.2789	-0.00063152	2.913	0.0014384	493.7997949437048	93.338	0.41885	94.21	93.998	94.417	0.87176	0.03029	-0.00016802	NaN	56.541	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1161900	+		11494	11161	5737	5761							0.09145003113803796
IPFPNVLPDF	10	Unmodified	_IPFPNVLPDF_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8169433474541	2	579.813325	1157.6121	4.0701	0.0023599	0.7619	0.00044176	4.832	0.0028017	579.8136204361409	94.363	0.50024	95.105	94.858	95.358	0.74123					39	15	3	0	0	0	0.059378	3	39742	39655;39702;39742		96.285	54.445	1	3954100			11495	2711	5738	5762	13957;13958;13959	13959					0.039594866541847296
IPFPNVLPDF	10	Unmodified	_IPFPNVLPDF_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8152343630791	2	579.813325	1157.6121	3.2261	0.0018706	0.32785	0.00019009	3.554	0.0020606	579.8134446870268	93.968	0.50371	95.156	94.863	95.367	1.1887					41	15	4	0	0	0	0.047799	3	39533	39481;39533;39582		85.272	35.339	1	2955300			11496	2711	5738	5762	13960;13961;13962	13961					0.039594866541847296
IPFSNPRVL	9	Unmodified	_IPFSNPRVL_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.8065673708916	2	521.805834	1041.59712	1.8124	0.00094573	0.12661	6.6063E-05	1.939	0.0010118	521.8060173289421	43.19	0.51051	44.543	44.376	44.886	1.3536					45	16	4	0	0	0	0.030128	3	18133	18079;18133;18187		96.111	54.016	1	24176000			11497	615	5739	5763	13963;13964;13965	13964					0.0779803957684635
IPFSNPRVL	9	Unmodified	_IPFSNPRVL_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant;NLRP2|p.E413Dfs*3|1|0.09|ENSG00000022556|chr19:54982936-54982937|-/TATTT|frameshift_variant;NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant;NLRP2|p.F695*|1|0.08|ENSG00000022556|chr19:54985098-54985108|ATTTGGATCAA/-|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8071166872978	2	521.805834	1041.59712	1.7431	0.00090956	0.60972	0.00031816	2.3528	0.0012277	521.806186916277	42.603	0.42796	44.524	44.353	44.781	1.9211					41	13	4	0	0	0	0.031849	4	17854	17817;17854;17893;17940		92.653	56.187	1	25321000			11498	615	5739	5763	13966;13967;13968;13969	13967					0.0779803957684635
IPFTGNVKL	9	Unmodified	_IPFTGNVKL_					0	0	0		nc|ENSG00000057757|Q9GZP4-2|PITHD1;ENSG00000057757|ENST00000246151|PITHD1	nc|ENSG00000057757|Q9GZP4-2|PITHD1	nc|ENSG00000057757|Q9GZP4-2|PITHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7960082888603	2	494.794935	987.575317	2.0132	0.00099614	-4.0135	-0.0019859	-2.0002	-0.00098971	494.7947931738374	46.842	0.63274	48.225	47.84	48.473	1.3825					35	19	3	0	0	0	0.16939	2	19654	19603;19654		36.506	4.2007	1	1321600			11499	730	5740	5764	13970;13971	13971					0.08103234828286077
IPFVVFLIL	9	Unmodified	_IPFVVFLIL_					0	0	0		tr|A0A553SRH4|A0A553SRH4_NIACINa+/H+antiporterNhaCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00930PE=3SV=1	tr|A0A553SRH4|A0A553SRH4_NIACINa+/H+antiporterNhaCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00930PE=3SV=1	tr|A0A553SRH4|A0A553SRH4_NIACINa+/H+antiporterNhaCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00930PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8461181521416	2	530.843897	1059.67324	5.025	0.0026675	-0.030642	-1.6266E-05	4.9943	0.0026512	530.8422370148778	87.822	0.69798	88.914	88.674	89.372	1.0918					27	21	2	0	0	0	0.75267	1	37086	37086		5.2307	0	1	1797700			11500	16558	5741	5765	13972	13972					0.14579043424282645
IPGLAAFLG	9	Unmodified	_IPGLAAFLG_					0	0	0			REV__ENSG00000189181|ENST00000342623|OR14I1	REV__ENSG00000189181|ENST00000342623|OR14I1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.5104247927666	1	858.508366	857.501089	1.1935	0.0010247	1.6457	0.0014129	2.8393	0.0024375	858.5100169722765	66.918	0.30756	68.807	68.616	68.923	1.8889					19	9	3	0	0	0	0.24585	1	28113	28113		28.173	0	1	1966700	+		11501	11605	5742	5766	13973	13973					0.06663891736764072
IPGLESFQL	9	Unmodified	_IPGLESFQL_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1003.550158679485	1	1003.54587	1002.5386	1.8142	0.0018206	-0.56995	-0.00057197	1.2443	0.0012487	1003.5452532761759	76.893	0.28072	76.893	76.814	77.095	0					12	8	2	0	0	0	0.087207	1	32017	32017		53.576	5.2297	1	663260			11502	5480	5743	5767	13974	13974					0.03742938211712499
IPGLESFQL	9	Unmodified	_IPGLESFQL_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1003.54587	1002.5386	2.4439	0.0024526	0.12476	0.0001252	2.5687	0.0025778	1003.54594159504	76.485	0.25539	76.807	76.631	76.887	0.32163	0.030252	-0.00014556	NaN	53.576	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	613590			11503	5480	5743	5767							0.03742938211712499
IPGLESFQL	9	Unmodified	_IPGLESFQL_					0	0	0		ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	ENSG00000279270|ENST00000624978|OR52R1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1003.54587	1002.5386	3.0551	0.003066	-1.3058	-0.0013104	1.7493	0.0017555	1003.546507881663	75.415	0.2758	76.721	76.555	76.83	1.3063	-0.055288	-0.0015812	NaN	53.576	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1115100			11504	5480	5743	5767							0.03742938211712499
IPGWLVLL	8	Unmodified	_IPGWLVLL_					0	0	0			REV__ENSG00000138463|ENST00000261038|SLC49A4	REV__ENSG00000138463|ENST00000261038|SLC49A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7909118533134	2	455.791664	909.568775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.426	1	46.791	46.291	47.291	1.3653								0	0	0	1.0178	1	19031	19031		24.21	6.0636	1		+		11505	10066	5744	5768	13975	13975					0.11037341667577039
IPHMDIEAL	9	Unmodified	_IPHMDIEAL_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000426688.1_1_1:81674334-81674790:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.7683593630791	2	519.76806	1037.52157	1.1382	0.00059159	-0.78521	-0.00040813	0.35297	0.00018346	519.7678100230349	52.576	0.46627	53.973	53.682	54.148	1.3966					51	14	5	0	0	0	0.033521	4	22026	21939;21987;22026;22066		81.864	28.621	1	39746000			11506	5077	5745	5769	13976;13977;13978;13979	13978					0.004306943342726299
IPHMDIEAL	9	Unmodified	_IPHMDIEAL_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF;ENST00000426688.1_1_1:81674334-81674790:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.7685424685478	2	519.76806	1037.52157	1.3444	0.00069877	-0.82434	-0.00042847	0.52004	0.0002703	519.7677957256924	51.976	0.49137	53.948	53.647	54.138	1.9722					54	15	5	0	0	0	0.02596	3	21728	21728;21778;21818		93.883	45.538	1	40914000			11507	5077	5745	5769	13980;13981;13982	13980					0.004306943342726299
IPIEDFITP	9	Unmodified	_IPIEDFITP_					0	0	0		ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.3282958865166	2	522.784233	1043.55391	3.6149	0.0018898	0.96735	0.00050571	4.5822	0.0023955	522.7847830414626	73.664	0.56463	74.982	74.654	75.218	1.318					42	17	3	0	0	0	0.078322	1	30891	30891		34.102	19.521	1	2912700			11508	4751	5746	5770	13983	13983					0.03387805008901523
IPIEDFITP	9	Unmodified	_IPIEDFITP_					0	0	0		ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.3278076052666	2	522.784233	1043.55391	2.5671	0.0013421	2.6322	0.0013761	5.1994	0.0027181	522.7855604703751	73.247	0.53632	75.057	74.671	75.207	1.8101					39	16	3	0	0	0	0.1006	1	30642	30642		15.847	0	1	2838100			11509	4751	5746	5770	13984	13984					0.03387805008901523
IPILKYIKE	9	Unmodified	_IPILKYIKE_					0	0	0		tr|A0A7D7A5M3|A0A7D7A5M3_9CLOTcysteine-S-conjugatebeta-lyaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07400PE=3SV=1	tr|A0A7D7A5M3|A0A7D7A5M3_9CLOTcysteine-S-conjugatebeta-lyaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07400PE=3SV=1	tr|A0A7D7A5M3|A0A7D7A5M3_9CLOTcysteine-S-conjugatebeta-lyaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07400PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8565551638603	2	558.854993	1115.69543	2.3194	0.0012962	0.20866	0.00011661	2.5281	0.0014128	558.8551812616159	45.356	0.83315	46.721	46.18	47.013	1.3653					37	25	2	0	0	0	0.49082	1	18930	18930		15.847	3.6065	1	727800			11510	17299	5747	5771	13985	13985					0.1422122310202667
IPIPSTGSVEM	11	Oxidation (M)	_IPIPSTGSVEM(Oxidation (M))_		IPIPSTGSVEM(1)		IPIPSTGSVEM(100)	0	0	1		ENST00000563135.5_1_15:41146443-41149170:+|nuORF;ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7893554568291	2	573.789189	1145.56383	1.4715	0.0008443	-1.2643	-0.00072546	0.20713	0.00011885	573.7886585367856	38.306	0.42418	39.602	39.381	39.805	1.2961					34	13	3	0	0	0	0.019239	3	16070	16019;16070;16118		99.799	48.169	1	6394100			11511	3882	5748	5772	13986;13987;13988	13987		65			-0.003133750480174058
IPIPSTGSVEM	11	Oxidation (M)	_IPIPSTGSVEM(Oxidation (M))_		IPIPSTGSVEM(1)		IPIPSTGSVEM(89)	0	0	1		ENST00000563135.5_1_15:41146443-41149170:+|nuORF;ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.7895995974541	2	573.789189	1145.56383	0.84583	0.00048533	-1.0819	-0.00062079	-0.23608	-0.00013546	573.7891539847357	37.837	0.44561	39.658	39.403	39.848	1.8202					35	14	4	0	0	0	0.026901	2	15848	15848;15901		88.954	43.254	1	4597400			11512	3882	5748	5772	13989;13990	13989		65			-0.003133750480174058
IPIPSTGSVEM	11	Unmodified	_IPIPSTGSVEM_					0	0	0		ENST00000563135.5_1_15:41146443-41149170:+|nuORF;ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7916137576103	2	565.791732	1129.56891	1.2442	0.00070394	-1.9099	-0.0010806	-0.66574	-0.00037667	565.7908227491956	53.715	0.75138	55.116	54.92	55.671	1.4005					54	27	3	0	0	0	0.019239	3	22434	22434;22476;22528		99.799	43.622	1	44832000			11513	3882	5748	5773	13991;13992;13993	13991					0.009309288145914252
IPIPSTGSVEM	11	Unmodified	_IPIPSTGSVEM_					0	0	0		ENST00000563135.5_1_15:41146443-41149170:+|nuORF;ENSG00000166145|ENST00000562057|SPINT1;nc|ENSG00000166145|O43278|SPINT1	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	ENST00000563135.5_1_15:41146443-41149170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7914916872978	2	565.791732	1129.56891	0.71185	0.00040276	-1.8063	-0.001022	-1.0945	-0.00061924	565.7910542845569	53.205	0.661	55.175	54.997	55.658	1.9697					60	25	4	0	0	0	0.026294	4	22242	22242;22284;22323;22362		92.653	37.324	1	36076000			11514	3882	5748	5773	13994;13995;13996;13997	13994					0.009309288145914252
IPIVHRVLK	9	Unmodified	_IPIVHRVLK_					0	0	0		nc|ENSG00000140612|P67812-2|SEC11A;nc|ENSG00000140612|P67812-4|SEC11A;nc|ENSG00000226098|P0C7V7|SEC11B;ENSG00000140612|ENST00000268220|SEC11A;nc|ENSG00000140612|P67812-3|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	nc|ENSG00000140612|P67812-2|SEC11A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1075.222705066204	1	1074.71461	1073.70733	1.2746	0.0013698	0.044965	4.8324E-05	1.3195	0.0014181	1074.7151939229025	28.214	0.40438	28.214	28.1	28.504	0					20	12	2	0	0	0	0.11833	1	11789	11789		1.8442	0	1	951590			11515	2928	5749	5774	13998	13998					0.17342884635877454
IPIYSPPFI	9	Unmodified	_IPIYSPPFI_					0	0	0			REV__ENSG00000213759|ENST00000446444|UGT2B11	REV__ENSG00000213759|ENST00000446444|UGT2B11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.3978759646416	2	523.799686	1045.58482	2.4679	0.0012927	-1.8504	-0.00096926	0.61741	0.0003234	523.7985611989394	85.164	0.15073	86.323	86.21	86.361	1.159					6	4	2	0	0	0	0.11109	1	35706	35706		14.582	0	1	1101900	+		11516	11840	5750	5775	13999	13999					0.06385003113814491
IPIYSPPFI	9	Unmodified	_IPIYSPPFI_					0	0	0			REV__ENSG00000213759|ENST00000446444|UGT2B11	REV__ENSG00000213759|ENST00000446444|UGT2B11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.3972045779228	2	523.799686	1045.58482	2.5593	0.0013406	-0.81916	-0.00042907	1.7402	0.00091149	523.7982422595418	84.616	0.15369	86.212	86.158	86.311	1.5962					8	4	3	0	0	0	0.11109	1	35519	35519		9.3474	4.1168	1	443030	+		11517	11840	5750	5775	14000	14000					0.06385003113814491
IPKDTWNLL	9	Unmodified	_IPKDTWNLL_					0	0	0		ENSG00000043093|ENST00000292782|DCUN1D1	ENSG00000043093|ENST00000292782|DCUN1D1	ENSG00000043093|ENST00000292782|DCUN1D1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2195922732353	2	550.310949	1098.60735	3.6279	0.0019965	-2.414	-0.0013284	1.2139	0.00066803	550.310111757936	81.478	0.18464	83.174	83.074	83.258	1.6959					9	5	2	0	0	0	0.11787	1	34186	34186		0	0	1	309330			11518	668	5751	5776	14001	14001					0.06198602511403806
IPKGILKTGW	10	Unmodified	_IPKGILKTGW_					0	0	0		nc|ENSG00000168538|Q7Z392-4|TRAPPC11;nc|ENSG00000168538|Q7Z392-3|TRAPPC11;ENSG00000168538|ENST00000334690|TRAPPC11;ENST00000509857.5_1_4:184585182-184595983:+|nuORF	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	nc|ENSG00000168538|Q7Z392-4|TRAPPC11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.2772704958916	2	556.844959	1111.67537	1.9379	0.0010791	-3.009	-0.0016755	-1.071	-0.00059639	556.842948754088	42.14	0.37199	43.48	43.23	43.602	1.3399					16	11	2	0	0	0	0.12545	1	17705	17705		4.3292	0	1	625530			11519	4039	5752	5777	14002	14002					0.12399472162110214
IPKIKFHLGI	10	Unmodified	_IPKIKFHLGI_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3781005740166	2	583.376426	1164.7383	0.63201	0.0003687	2.0695	0.0012073	2.7015	0.001576	583.3775741063457	27.124	0.71151	28.871	28.524	29.235	1.747					49	22	3	0	0	0	0.8974	1	11295	11295		3.5965	2.995	1	4237900	+		11520	9320	5753	5778	14003	14003					0.16252037950107479
IPKMRTQHPGP	11	Unmodified	_IPKMRTQHPGP_					0	0	0		ENST00000500148.6_1_5:80535063-80546553:-|nuORF	ENST00000500148.6_1_5:80535063-80546553:-|nuORF	ENST00000500148.6_1_5:80535063-80546553:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3440429568291	2	631.345332	1260.67611	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.962	1	88.962	88.462	89.462	0								0	0	0	0.63775	1	37190	37190		3.5965	0	1				11521	6974	5754	5779	14004	14004					0.0561994353947739
IPKTKKKIRPK	11	Unmodified	_IPKTKKKIRPK_					0	0	0			REV__TOP2A-STAU1|1|fusion	REV__TOP2A-STAU1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.9607421755791	2	668.961189	1335.90782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.745	1	62.745	62.245	63.245	0								0	0	0	0.63775	1	26160	26160		1.3295	0	1		+		11522	14680	5755	5780	14005	14005					0.25330734232670693
IPLDDVVFEF	10	Unmodified	_IPLDDVVFEF_					0	0	0			REV__nc|ENSG00000100926|O15321-2|TM9SF1	REV__nc|ENSG00000100926|O15321-2|TM9SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3101684451103	2	597.308072	1192.60159	1.6514	0.00098638	-0.45868	-0.00027398	1.1927	0.0007124	597.3089305251332	46.149	0.5298	47.524	47.303	47.832	1.3751					30	16	3	0	0	0	0.81324	1	19398	19398		10.824	0	1	811550	+		11523	9015	5756	5781	14006	14006					0.012994592090763035
IPLEKSLEL	9	Unmodified	_IPLEKSLEL_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3133422732353	2	521.313158	1040.61176	1.5511	0.0008086	-1.0229	-0.00053327	0.52815	0.00027533	521.3124836089783	48.466	0.36708	49.854	49.681	50.048	1.388					27	11	3	0	0	0	0.039278	1	20304	20304		76.825	8.7441	1	4909600			11524	4746	5757	5782	14007	14007					0.09308066934318049
IPLEKSLEL	9	Unmodified	_IPLEKSLEL_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3141967654228	2	521.313158	1040.61176	2.3169	0.0012078	-2.1062	-0.001098	0.21077	0.00010988	521.3118701099103	47.998	0.30858	49.975	49.775	50.084	1.9772					22	9	3	0	0	0	0.033102	1	20069	20069		82.529	14.449	1	4857200			11525	4746	5757	5782	14008	14008					0.09308066934318049
IPLKDVVPR	9	Unmodified	_IPLKDVVPR_					0	0	0		ENST00000564216.5_1_15:75094247-75094851:+|nuORF;ENSG00000103653|ENST00000220003|CSK	ENST00000564216.5_1_15:75094247-75094851:+|nuORF	ENST00000564216.5_1_15:75094247-75094851:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	346.2236816287041	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.329	1	85.925	85.425	86.425	1.5962								0	0	0	0.42693	1	35369	35369		0.86438	0.23755	1				11526	1439	5758	5783	14009	14009					0.12766899127996112
IPLKLPIKTI	10	Unmodified	_IPLKLPIKTI_					0	0	0		tr|A0A7D6VQD3|A0A7D6VQD3_9CLOTCobalt-precorrin-5BC(1)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cbiDPE=3SV=1	tr|A0A7D6VQD3|A0A7D6VQD3_9CLOTCobalt-precorrin-5BC(1)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cbiDPE=3SV=1	tr|A0A7D6VQD3|A0A7D6VQD3_9CLOTCobalt-precorrin-5BC(1)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cbiDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	379.2664367556572	3	379.265282	1134.77402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.27	109.77	110.77	0.16133								0	0	0	0.66255	1	47835	47835		0.13989	0.13989	1				11527	16791	5759	5784	14010	14010					0.21202075407131815
IPLLILVLV	9	Unmodified	_IPLLILVLV_					0	0	0		tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.8593932986259	2	496.859547	991.70454	0.95024	0.00047214	-1.1738	-0.00058321	-0.22355	-0.00011107	496.8590523484188	101.57	0.15324	101.57	101.47	101.62	0					7	4	2	0	0	0	0.85403	1	42541	42541		0	0	1	3920700			11528	17005	5760	5785	14011	14011					0.20835616458350614
IPLLILVLV	9	Unmodified	_IPLLILVLV_					0	0	0		tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	tr|A0A7D6VZ87|A0A7D6VZ87_9CLOTDUF4367domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18655PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.8609802126884	2	496.859547	991.70454	3.3794	0.0016791	-0.52827	-0.00026248	2.8511	0.0014166	496.8597697954143	101.49	0.18538	101.56	101.42	101.61	0.067009					7	5	2	0	0	0	0.85403	1	42504	42504		0	0	1	2303700			11529	17005	5760	5785	14012	14012					0.20835616458350614
IPLLPNEDPE	10	Unmodified	_IPLLPNEDPE_					0	0	0		ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.7966186404228	2	568.795329	1135.5761	1.6557	0.00094177	0.75455	0.00042919	2.4103	0.001371	568.7961617308305	53.007	0.80013	53.33	53.021	53.821	0.32283					83	25	5	0	0	0	0.47063	1	22162	22162		29.082	3.6823	1	13224000			11530	4011	5761	5786	14013	14013					0.013739846866428707
IPLLPNEDPE	10	Unmodified	_IPLLPNEDPE_					0	0	0		ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	ENSG00000168038|ENST00000301831|ULK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.7960693240166	2	568.795329	1135.5761	0.33422	0.0001901	-0.32971	-0.00018754	0.00451	2.5653E-06	568.7952169096159	51.376	0.95802	53.351	53.03	53.988	1.9753					108	33	5	0	0	0	0.5476	1	21521	21521		25.399	0	1	32317000			11531	4011	5761	5786	14014	14014					0.013739846866428707
IPLNLWGQ	8	Unmodified	_IPLNLWGQ_					0	0	0		nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7644836306572	2	470.766178	939.517802	0.037651	1.7725E-05	-3.1789	-0.0014965	-3.1412	-0.0014788	470.76464507248465	12.958	0.37894	13.684	13.441	13.82	0.72639					16	11	3	0	0	0	0.38673	1	5388	5388		56.541	5.6862	1	591660			11532	8028	5762	5787	14015	14015					0.04562392622699463
IPLNLWGQ	8	Unmodified	_IPLNLWGQ_					0	0	0		nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7653991580009	2	470.766178	939.517802	0.07971	3.7525E-05	-1.7059	-0.00080307	-1.6262	-0.00076554	470.764784298643	13.236	0.28148	13.962	13.851	14.133	0.72639					11	8	2	0	0	0	0.41488	1	5493	5493		53.576	0	1	667080			11533	8028	5762	5787	14016	14016					0.04562392622699463
IPLNLWGQ	8	Unmodified	_IPLNLWGQ_					0	0	0		nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	nc|ENSG805|P63124|HERV-K104_pro	MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7639648318291	2	470.766178	939.517802	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.542	1	13.33	12.83	13.83	0.78751								0	0	0	1.0178	1	5204	5204		30.225	3.3412	1				11534	8028	5762	5787	14017	14017					0.04562392622699463
IPLPHPILL	9	Unmodified	_IPLPHPILL_					0	0	0			REV__ENST00000497196.5_1_22:38889517-38891019:-|nuORF	REV__ENST00000497196.5_1_22:38889517-38891019:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8336059451103	2	506.83132	1011.64809	4.0796	0.0020677	-1.8161	-0.00092045	2.2636	0.0011472	506.8305019271666	81.841	0.65413	83.053	82.883	83.537	1.2125					43	20	3	0	0	0	0.08022	1	34331	34331		56.048	10.298	1	3018700	+		11535	13477	5763	5788	14018	14018					0.14272988621712557
IPLPKIKRLL	10	Unmodified	_IPLPKIKRLL_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.9196655154228	2	595.921001	1189.82745	1.5515	0.00092458	-1.6857	-0.0010046	-0.13424	-7.9997E-05	595.9200127268051	104	0.9526	104	103.2	104.15	0					124	47	3	0	0	0	0.89803	1	43853	43853		0.40072	0.40072	1	29848000			11536	4575	5764	5789	14019	14019					0.24012872909656835
IPLPKIKRLL	10	Unmodified	_IPLPKIKRLL_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.9200927615166	2	595.921001	1189.82745	1.5503	0.00092387	-1.4862	-0.00088568	0.064085	3.8189E-05	595.9199200168066	104.75	0.83846	104.75	104.31	105.15	0					87	43	3	0	0	0	0.89803	2	44062	44062;44346		0.40072	0.40072	1	50528000			11537	4575	5764	5789	14020;14021	14020					0.24012872909656835
IPLVQVLRTT	10	Unmodified	_IPLVQVLRTT_					0	0	0		nc|ENSG00000140479|P29122-2|PCSK6;nc|ENSG00000140479|P29122-8|PCSK6;ENSG00000140479|ENST00000611716|PCSK6;nc|ENSG00000140479|P29122-7|PCSK6;nc|ENSG00000140479|P29122-6|PCSK6;nc|ENSG00000140479|P29122-5|PCSK6;nc|ENSG00000140479|P29122-4|PCSK6;ENST00000560902.5_1_15:101872079-101922328:-|nuORF;ENST00000558154.1_1_15:101906377-101922391:-|nuORF	nc|ENSG00000140479|P29122-2|PCSK6	nc|ENSG00000140479|P29122-2|PCSK6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	570.7932617068291	2	570.360973	1138.70739	2.704	0.0015423	-3.1246	-0.0017822	-0.4206	-0.00023989	570.3592920095737	80.022	0.36887	81.273	80.955	81.324	1.2512					19	11	2	0	0	0	0.12513	1	33577	33577		7.9102	0.62092	1	697170			11538	2921	5765	5790	14022	14022					0.14358839845226612
IPMGKSMLVL	10	Unmodified	_IPMGKSMLVL_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2;ENSG00000167244|ENST00000416167|IGF2;chr11:2135529-2140857|279|69.0|0.32|7.76|-|ENST00000381389|INS-IGF2,IGF2;nc|ENSG00000167244|P01344-2|IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8147460818291	2	544.813956	1087.61336	1.1388	0.00062041	-0.35051	-0.00019096	0.78825	0.00042945	544.814096962276	56.582	0.64689	57.996	57.753	58.4	1.4145					60	20	4	0	0	0	0.13797	2	23698	23698;23739		57.249	22.317	1	10321000			11539	184	5766	5791	14023;14024	14023					0.07305661427085397
IPMGKSMLVL	10	Unmodified	_IPMGKSMLVL_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2;ENSG00000167244|ENST00000416167|IGF2;chr11:2135529-2140857|279|69.0|0.32|7.76|-|ENST00000381389|INS-IGF2,IGF2;nc|ENSG00000167244|P01344-2|IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8135864138603	2	544.813956	1087.61336	1.0459	0.00056981	-0.97951	-0.00053365	0.066377	3.6163E-05	544.813452967798	55.932	0.71544	57.901	57.618	58.334	1.9684					60	23	4	0	0	0	0.11344	2	23442	23442;23491		61.602	23.628	1	10305000			11540	184	5766	5791	14025;14026	14025					0.07305661427085397
IPMLLKPQY	9	Unmodified	_IPMLLKPQY_					0	0	0		tr|A0A553SKV0|A0A553SKV0_NIACITypeIIsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_19330PE=4SV=1	tr|A0A553SKV0|A0A553SKV0_NIACITypeIIsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_19330PE=4SV=1	tr|A0A553SKV0|A0A553SKV0_NIACITypeIIsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_19330PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2175475955009	3	368.215822	1101.62564	0.44188	0.00016271	1.726	0.00063555	2.1679	0.00079826	368.2165879826584	35.727	0.30628	37.545	37.324	37.63	1.8176					36	20	2	0	0	0	0.44535	2	14933	14933;14976		12.241	0	1	2685600			11541	16308	5767	5792	14027;14028	14027					0.07889021161759047
IPMPDFDL	8	Unmodified	_IPMPDFDL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	947.4550048708916	1	947.454281	946.447005	1.5774	0.0014945	-1.9226	-0.0018216	-0.34522	-0.00032708	947.4523604571417	77.275	0.2551	79.026	78.849	79.105	1.7514					9	7	2	0	0	0	0.37084	1	32405	32405		60.39	26.202	1	551700			11542	30	5768	5793	14029	14029					-0.02836068477131448
IPMPDFDL	8	Unmodified	_IPMPDFDL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	947.454281	946.447005	2.0358	0.0019288	0.47745	0.00045237	2.5132	0.0023812	947.4543920342035	77.685	0.28462	78.966	78.823	79.108	1.2809	-0.030188	0.0011362	NaN	60.39	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556480			11543	30	5768	5793							-0.02836068477131448
IPMPDFDLHL	10	Unmodified	_IPMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3038818240166	2	599.302267	1196.58998	2.5046	0.001501	2.652	0.0015893	5.1566	0.0030904	599.3024605856574	77.776	0.55901	79.057	78.76	79.319	1.2809					41	17	3	0	0	0	0.043055	3	32663	32613;32663;32718		81.89	55.622	1	3184000			11544	30	5769	5794	14030;14031;14032	14031					-0.0004506108589339419
IPMPDFDLHL	10	Unmodified	_IPMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3053466677666	2	599.302267	1196.58998	1.2694	0.00076076	1.8922	0.001134	3.1617	0.0018948	599.3035528798038	77.305	0.34621	79.057	78.915	79.261	1.7514					27	10	4	0	0	0	0.043055	1	32414	32414		81.89	55.622	1	2760600			11545	30	5769	5794	14033	14033					-0.0004506108589339419
IPMVYEQTPRG	11	Unmodified	_IPMVYEQTPRG_					0	0	0			REV__ENSG00000186675|ENST00000373359|MAGEE2	REV__ENSG00000186675|ENST00000373359|MAGEE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.173	1	20.173	19.673	20.673	0								0	0	0	0.63775	1	8385	8385		0.40827	0.13925	1		+		11546	11508	5770	5795	14034	14034					0.010571113457899628
IPMYVLTIP	9	Unmodified	_IPMYVLTIP_					0	0	0		tr|A0A7D6VP02|A0A7D6VP02_9CLOTPilZdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16780PE=4SV=1	tr|A0A7D6VP02|A0A7D6VP02_9CLOTPilZdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16780PE=4SV=1	tr|A0A7D6VP02|A0A7D6VP02_9CLOTPilZdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16780PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8016845583916	2	523.801371	1045.58819	3.8122	0.0019968	-3.9286	-0.0020578	-0.11641	-6.0978E-05	523.7995129728333	97.332	0.12496	97.616	97.539	97.664	0.28442					7	4	2	0	0	0	0.20838	1	40958	40958		32.117	6.7177	1	2501200			11547	16750	5771	5796	14035	14035					0.06721929896161782
IPNEIIHAL	9	Unmodified	_IPNEIIHAL_					0	0	0		HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant;ENSG00000099783|ENST00000325495|HNRNPM	HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant	HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2989379763603	2	510.297842	1018.58113	1.8446	0.0009413	0.41238	0.00021044	2.257	0.0011517	510.29805189122334	48.46	0.55862	49.848	49.49	50.048	1.388					54	17	4	0	0	0	0.0069529	5	20260	20172;20222;20260;20299;20339		114.65	59.89	1	59315000			11548	1213	5772	5797	14036;14037;14038;14039;14040	14038					0.07258333339939327
IPNEIIHAL	9	Unmodified	_IPNEIIHAL_					0	0	0		HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant;ENSG00000099783|ENST00000325495|HNRNPM	HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant	HNRNPM|p.L411Sfs*117|1|0.08|ENSG00000099783|chr19:8485658-8485658|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2991515994072	2	510.297842	1018.58113	2.6828	0.001369	-0.56796	-0.00028983	2.1148	0.0010792	510.2975775203632	47.906	0.67963	49.882	49.555	50.234	1.976					61	21	4	0	0	0	0.0033884	4	20027	19977;20027;20065;20104		126.57	54.644	1	44768000			11549	1213	5772	5797	14041;14042;14043;14044	14042					0.07258333339939327
IPNRGIDLL	9	Unmodified	_IPNRGIDLL_					0	0	0		ENSG00000015479|ENST00000394805|MATR3;MATR3-UBE2D2|2|fusion;MATR3-UBE2D2|6|fusion;nc|ENSG00000280987|P43243-2|MATR3;MATR3-UBE2D2|3|fusion;ENST00000502422.5_1_5:138651717-138665081:+|nuORF;MATR3-UBE2D2|7|fusion	ENSG00000015479|ENST00000394805|MATR3	ENSG00000015479|ENST00000394805|MATR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.8057433962822	2	505.803291	1009.59203	2.7581	0.0013951	0.45819	0.00023175	3.2163	0.0016268	505.8031205696398	44.455	0.72844	45.82	45.577	46.305	1.3653					38	22	3	0	0	0	0.070055	2	18642	18599;18642		60.074	10.141	1	2056600			11550	599	5773	5798	14045;14046	14046					0.08761735714244878
IPNSIMTIL	9	Unmodified	_IPNSIMTIL_					0	0	0		ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2923461794853	2	501.288628	1000.5627	2.7568	0.0013819	3.7016	0.0018556	6.4584	0.0032375	501.2899540659551	79.881	0.33797	81.132	80.955	81.293	1.2512					25	10	3	0	0	0	0.23535	2	33509	33509;33557		29.082	0	1	1206600			11551	2276;7531	5774	5799	14047;14048	14047					0.062444553737577735
IPNSIMTIL	9	Unmodified	_IPNSIMTIL_					0	0	0		ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2928344607353	2	501.288628	1000.5627	1.464	0.00073388	3.6512	0.0018303	5.1152	0.0025642	501.2904792035565	79.352	0.37081	81.087	80.908	81.279	1.735					26	11	3	0	0	0	0.12251	1	33276	33276		41.84	5.7126	1	1445700			11552	2276;7531	5774	5799	14049	14049					0.062444553737577735
IPNVIMLTAFG	11	Unmodified	_IPNVIMLTAFG_					0	0	0		tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3286010622978	2	588.328285	1174.64202	4.207	0.0024751	-3.4958	-0.0020567	0.71126	0.00041846	588.3266793563798	94.38	0.33906	95.121	94.919	95.258	0.74124					13	10	2	0	0	0	0.74096	1	39723	39723		17.113	3.2068	1	664680			11553	16313	5775	5800	14050	14050					0.06168102327842462
IPNVIMLTAFG	11	Unmodified	_IPNVIMLTAFG_					0	0	0		tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	tr|A0A553SKY1|A0A553SKY1_NIACIStage0sporulationproteinAOS=NialliacirculansOX=1397GN=spo0APE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8304931521416	2	588.328285	1174.64202	3.2575	0.0019165	-3.2679	-0.0019226	-0.010335	-6.0805E-06	588.326462808953	93.967	0.40801	95.155	94.894	95.302	1.1887					18	12	2	0	0	0	0.54522	1	39564	39564		22.736	5.6234	1	627420			11554	16313	5775	5800	14051	14051					0.06168102327842462
IPQCRRNR	8	Unmodified	_IPQCRRNR_					0	0	0		ENST00000569193.1_1_16:46957913-46962906:+|nuORF	ENST00000569193.1_1_16:46957913-46962906:+|nuORF	ENST00000569193.1_1_16:46957913-46962906:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1043.260668933392	1	1042.56869	1041.56142	-0.48961	-0.00051045	-0.20225	-0.00021086	-0.69186	-0.00072131	1043.5726256082278	12.706	0.30924	13.4	13.195	13.505	0.69396					11	9	2	0	0	0	0.89051	1	5231	5231		2.3027	0	1	634070			11555	7380	5776	5801	14052	14052					0.04229678848173535
IPQCRRNR	8	Unmodified	_IPQCRRNR_					0	0	0		ENST00000569193.1_1_16:46957913-46962906:+|nuORF	ENST00000569193.1_1_16:46957913-46962906:+|nuORF	ENST00000569193.1_1_16:46957913-46962906:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1042.56869	1041.56142	1.2251	0.0012772	-5.5291	-0.0057644	-4.304	-0.0044872	1043.5648041010186	12.448	0.2075	13.236	13.095	13.303	0.78751	-0.082205	-0.0028703	NaN	2.3027	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	344030			11556	7380	5776	5801							0.04229678848173535
IPQVIGKLIQK	11	Unmodified	_IPQVIGKLIQK_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	618.9054443240166	2	618.905548	1235.79654	1.5455	0.00095651	-1.9687	-0.0012185	-0.42324	-0.00026194	618.9045240816106	105.98	0.13783	105.98	105.91	106.05	0					17	6	4	0	0	0	0.96769	1	45114	45114		5.7319	4.0792	1	101520000			11557	5374	5777	5802	14053	14053					0.18807674804747876
IPQVIGKLIQK	11	Unmodified	_IPQVIGKLIQK_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000512908.2_1_5:70398727-70422449:-|nuORF;ENST00000315147.8_1_5:70265933-70281744:-|nuORF;ENST00000511830.2_1_5:69390488-69422514:-|nuORF;nc|ENSG00000249437|Q13075-2|NAIP	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	618.9047119021416	2	618.905548	1235.79654	2.6502	0.0016402	-3.1721	-0.0019632	-0.52192	-0.00032302	618.9037182180308	105.95	0.14117	106.01	105.92	106.06	0.05455					19	6	4	0	0	0	0.96769	1	45028	45028		5.7319	4.0792	1	113690000			11558	5374	5777	5802	14054	14054					0.18807674804747876
IPRLQKIWKNY	11	Unmodified	_IPRLQKIWKNY_					0	0	0		ST6GAL1|p.D265Efs*77|1|0.04|ENSG00000073849|chr3:187072937-187072938|-/GAGCCTATGTCAGTCTCCATCAGGATGTG|frameshift_variant;ST6GAL1|p.Y354Sfs*9|1|0.03|ENSG00000073849|chr3:187075642-187075643|-/C|frameshift_variant;ENSG00000073849|ENST00000169298|ST6GAL1;chr3:186930834-186942348|390|12.17|0.73|4.05|+|ENST00000677292|ST6GAL1,ST6GAL1	ST6GAL1|p.D265Efs*77|1|0.04|ENSG00000073849|chr3:187072937-187072938|-/GAGCCTATGTCAGTCTCCATCAGGATGTG|frameshift_variant	ST6GAL1|p.D265Efs*77|1|0.04|ENSG00000073849|chr3:187072937-187072938|-/GAGCCTATGTCAGTCTCCATCAGGATGTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	729.9395019412041	2	729.932628	1457.8507	4.0784	0.002977	4.3313	0.0031616	8.4097	0.0061385	729.9358311959986	87.967	0.6377	89.413	89.093	89.731	1.4467					25	19	2	0	0	0	1.039	1	37019	37019		1.3295	0.9789	1	1338900			11559	258	5778	5803	14055	14055					0.14009266956327338
IPRVILTNV	9	Unmodified	_IPRVILTNV_					0	0	0		nc|ENSG00000138468|Q9BQF6-5|SENP7;nc|ENSG00000138468|Q9BQF6-2|SENP7;ENSG00000138468|ENST00000394095|SENP7	nc|ENSG00000138468|Q9BQF6-5|SENP7	nc|ENSG00000138468|Q9BQF6-5|SENP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.8282958865166	2	512.829309	1023.64407	3.0745	0.0015767	-2.8279	-0.0014502	0.24654	0.00012643	512.8273859802606	80.765	0.29804	81.998	81.863	82.161	1.2332					21	9	3	0	0	0	0.20671	1	33896	33896		32.305	5.4218	1	6201800			11560	2834	5779	5804	14056	14056					0.13318899127989425
IPSCIAIK	8	Unmodified	_IPSCIAIK_					0	0	0		ENSG00000115091|ENST00000263238|ACTR3	ENSG00000115091|ENST00000263238|ACTR3	ENSG00000115091|ENST00000263238|ACTR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.7514526247978	2	422.751682	843.48881	1.197	0.00050604	-0.30436	-0.00012867	0.89266	0.00037737	422.7511720358516	26.054	0.21859	27.313	27.204	27.422	1.2594					10	6	2	0	0	0	0.87701	1	10904	10904		10.824	0.75	1	624590			11561	1895	5780	5805	14057	14057					0.06080532002056316
IPSCIAIK	8	Unmodified	_IPSCIAIK_					0	0	0		ENSG00000115091|ENST00000263238|ACTR3	ENSG00000115091|ENST00000263238|ACTR3	ENSG00000115091|ENST00000263238|ACTR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.7507812380791	2	422.751682	843.48881	0.64119	0.00027106	-1.6037	-0.00067798	-0.96255	-0.00040692	422.75094063258774	25.65	0.18363	27.367	27.276	27.459	1.7167					7	5	2	0	0	0	0.80889	1	10715	10715		20.454	1.0146	1	579660			11562	1895	5780	5805	14058	14058					0.06080532002056316
IPSESDPVP	9	Unmodified	_IPSESDPVP_					0	0	0			REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	470.7903320193291	2	470.73474	939.454927	2.17	0.0010215	3.3777	0.00159	5.5478	0.0026115	470.7365299377206	79.243	0.34185	80.978	80.814	81.155	1.735					16	10	2	0	0	0	0.11071	1	33209	33209		15.847	2.3393	1	886370	+		11563	9824	5781	5806	14059	14059					-0.017222179560008044
IPSEWHIEL	9	Unmodified	_IPSEWHIEL_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.G1956Wfs*9|1|0.04|ENSG00000119285|chr1:236555353-236555354|-/A|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.2940551638603	2	562.292756	1122.57096	2.9196	0.0016416	0.11464	6.4459E-05	3.0342	0.0017061	562.2928167482611	62.079	0.50897	63.496	63.27	63.779	1.4177					29	15	2	0	0	0	0.029061	2	26005	26005;26055		88.954	49.004	1	5667700			11564	2062	5782	5807	14060;14061	14060					0.014577256147049411
IPSEWHIEL	9	Unmodified	_IPSEWHIEL_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.G1956Wfs*9|1|0.04|ENSG00000119285|chr1:236555353-236555354|-/A|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.2939330935478	2	562.292756	1122.57096	2.337	0.0013141	0.036144	2.0323E-05	2.3731	0.0013344	562.2929964994261	61.46	0.50967	63.417	63.241	63.751	1.9571					29	15	2	0	0	0	0.026836	3	25818	25771;25818;25861		92.491	42.558	1	4640200			11565	2062	5782	5807	14062;14063;14064	14063					0.014577256147049411
IPSILIIAVI	10	Unmodified	_IPSILIIAVI_					0	0	0		tr|A0A553SPH0|A0A553SPH0_NIACIMembraneproteinYkvIOS=NialliacirculansOX=1397GN=CEQ21_26370PE=4SV=1	tr|A0A553SPH0|A0A553SPH0_NIACIMembraneproteinYkvIOS=NialliacirculansOX=1397GN=CEQ21_26370PE=4SV=1	tr|A0A553SPH0|A0A553SPH0_NIACIMembraneproteinYkvIOS=NialliacirculansOX=1397GN=CEQ21_26370PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3618041872978	2	526.359911	1050.70527	0.98309	0.00051746	3.4059	0.0017927	4.389	0.0023102	526.3613694986227	20.349	0.90041	20.349	20.042	20.942	0					60	28	3	0	0	0	0.89803	1	8458	8458		1.6526	0	1	1351600			11566	16467	5783	5808	14065	14065					0.18194411107424457
IPSPSLVSL	9	Unmodified	_IPSPSLVSL_					0	0	0		ENST00000437296.1_1_3:172536577-172538024:+|nuORF;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2;chr3:172752472-172754509|367|12.11|0.58|4.37|+|ENST00000540509|ECT2,ECT2;chr3:172750857-172752150|383|11.5|0.42|4.78|+|ENST00000540509|ECT2,ECT2;ENSG00000114346|ENST00000392692|ECT2	ENST00000437296.1_1_3:172536577-172538024:+|nuORF	ENST00000437296.1_1_3:172536577-172538024:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5428344607353	1	912.54006	911.532783	2.4111	0.0022002	-0.85465	-0.0007799	1.5565	0.0014203	912.5394314197425	63.394	0.22536	65.339	65.248	65.473	1.9444					10	6	2	0	0	0	0.042029	1	26593	26593		74.423	16.951	1	528270			11567	256	5784	5809	14066	14066					0.07347839700048553
IPSPSLVSL	9	Unmodified	_IPSPSLVSL_					0	0	0		ENST00000437296.1_1_3:172536577-172538024:+|nuORF;nc|ENSG00000114346|Q9H8V3-2|ECT2;nc|ENSG00000114346|Q9H8V3-4|ECT2;chr3:172752472-172754509|367|12.11|0.58|4.37|+|ENST00000540509|ECT2,ECT2;chr3:172750857-172752150|383|11.5|0.42|4.78|+|ENST00000540509|ECT2,ECT2;ENSG00000114346|ENST00000392692|ECT2	ENST00000437296.1_1_3:172536577-172538024:+|nuORF	ENST00000437296.1_1_3:172536577-172538024:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	912.54006	911.532783	2.0443	0.0018655	0.28212	0.00025744	2.3264	0.002123	912.5405008080145	63.933	0.25943	65.34	65.174	65.433	1.4071	0.00060469	0.0003379	NaN	74.423	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	667120			11568	256	5784	5809							0.07347839700048553
IPSTFDSEK	9	Unmodified	_IPSTFDSEK_					0	0	0		tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2538329958916	2	512.253297	1022.49204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.066	1	21.066	20.566	21.566	0								0	0	0	0.317	1	8758	8758		16.942	0	1				11569	16070	5785	5810	14067	14067					-0.018305464102354563
IPSTFDSEK	9	Unmodified	_IPSTFDSEK_					0	0	0		tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2546874880791	2	512.253297	1022.49204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.266	1	21.266	20.766	21.766	0								0	0	0	0.317	1	8842	8842		16.942	0	1				11570	16070	5785	5810	14068	14068					-0.018305464102354563
IPSTFDSEK	9	Unmodified	_IPSTFDSEK_					0	0	0		tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2532836794853	2	512.253297	1022.49204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.527	1	21.527	21.027	22.027	0								0	0	0	0.317	1	8952	8952		16.942	0	1				11571	16070	5785	5810	14069	14069					-0.018305464102354563
IPSTFDSEK	9	Unmodified	_IPSTFDSEK_					0	0	0		tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	tr|A0A553SFP0|A0A553SFP0_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_09265PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2554809451103	2	512.253297	1022.49204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.136	1	22.136	21.636	22.636	0								0	0	0	0.3709	1	9206	9206		11.64	0	1				11572	16070	5785	5810	14070	14070					-0.018305464102354563
IPTLWEAKP	9	Unmodified	_IPTLWEAKP_					0	0	0		chr6:24708911-24710495|100|19.71|0.37|5.73|-|0|TE_info:AluSp,AluSp_dup16589,Alu,SINE,donor,-,24710495,24710563|C6orf62,None|1	chr6:24708911-24710495|100|19.71|0.37|5.73|-|0|TE_info:AluSp,AluSp_dup16589,Alu,SINE,donor,-,24710495,24710563|C6orf62,None|1	chr6:24708911-24710495|100|19.71|0.37|5.73|-|0|TE_info:AluSp,AluSp_dup16589,Alu,SINE,donor,-,24710495,24710563|C6orf62,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.589038074017	1	1054.59316	1053.58588	3	0.0031637	-4.3339	-0.0045705	-1.3339	-0.0014067	1054.5862586698365	84.176	0.245	85.814	85.685	85.93	1.6379					10	7	2	0	0	0	0.13873	1	35326	35326		39.957	11.47	1	5777300			11573	271	5786	5811	14071	14071					0.061232174826727714
IPTNEKADPF	10	Unmodified	_IPTNEKADPF_					0	0	0		nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2916137576103	2	566.287671	1130.56079	2.0962	0.0011871	4.076	0.0023082	6.1722	0.0034952	566.2906654274777	71.364	0.81953	72.705	72.364	73.184	1.3415					51	26	2	0	0	0	0.65574	1	30079	30079		20.454	6.5476	1	3783900			11574	4235	5787	5812	14072	14072					0.0007311788947390596
IPTNEKADPF	10	Unmodified	_IPTNEKADPF_					0	0	0		nc|ENSG00000172403|Q9UMS6|SYNPO2;nc|ENSG00000172403|Q9UMS6-3|SYNPO2;nc|ENSG00000172403|Q9UMS6-4|SYNPO2;ENSG00000172403|ENST00000307142|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	nc|ENSG00000172403|Q9UMS6|SYNPO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2921630740166	2	566.287671	1130.56079	1.0609	0.0006008	2.3305	0.0013197	3.3915	0.0019205	566.7904118823144	70.84	0.91879	72.677	72.381	73.299	1.8378					70	29	4	0	0	0	0.51515	1	29843	29843		26.884	3.7352	1	3765000			11575	4235	5787	5812	14073	14073					0.0007311788947390596
IPVDEHEQYK	10	Unmodified	_IPVDEHEQYK_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	629.3087036013603	2	629.309135	1256.60372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.41	1	34.41	33.91	34.91	0								0	0	0	0.66031	1	14424	14424		3.9444	0	1		+		11576	14606	5788	5813	14074	14074					-0.014321120530894405
IPVEELFKL	9	Unmodified	_IPVEELFKL_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2;ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3252441287041	2	544.323525	1086.6325	3.4185	0.0018608	-1.1382	-0.00061954	2.2804	0.0012413	544.3235263816938	73.664	0.50066	74.982	74.654	75.154	1.318					38	15	3	0	0	0	0.032536	2	30906	30855;30906		83.429	27.881	1	4008100			11577	807	5789	5814	14075;14076	14076					0.09264657314020042
IPVEELFKL	9	Unmodified	_IPVEELFKL_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2;ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3253661990166	2	544.323525	1086.6325	2.6286	0.0014308	0.51435	0.00027997	3.1429	0.0017108	544.3238319863113	73.098	0.53986	74.908	74.543	75.083	1.8101					29	16	2	0	0	0	0.032536	2	30632	30632;30686		83.429	39.656	1	2983300			11578	807	5789	5814	14077;14078	14077					0.09264657314020042
IPVEIIMLP	9	Unmodified	_IPVEIIMLP_					0	0	0		tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.8099243044853	2	512.809196	1023.60384	4.0151	0.002059	-2.2066	-0.0011316	1.8085	0.00092744	512.8082403554306	97.332	0.24419	97.616	97.45	97.694	0.28442					26	8	5	0	0	0	0.10722	2	40921	40921;40968		46.921	14.804	1	70657000			11579	16201	5790	5815	14079;14080	14079					0.09298216413208138
IPVEIIMLP	9	Unmodified	_IPVEIIMLP_					0	0	0		tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1024.612475574017	1	1024.61112	1023.60384	3.0881	0.0031641	-1.4758	-0.0015121	1.6123	0.001652	1024.6093819951845	97.332	0.18596	97.616	97.478	97.664	0.28442					12	6	2	0	0	0	0.12174	3	40932	40925;40932;40970		42.095	11.87	1	40424000			11580	16201	5790	5815	14081;14082;14083	14082					0.09298216413208138
IPVEIIMLP	9	Unmodified	_IPVEIIMLP_					0	0	0		tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.8099243044853	2	512.809196	1023.60384	3.6341	0.0018636	-3.3589	-0.0017225	0.27524	0.00014114	512.807368496841	97.247	0.2448	97.554	97.38	97.625	0.3062					26	9	4	0	0	0	0.069258	2	40877	40877;40915		60.39	13.469	1	46942000			11581	16201	5790	5815	14084;14085	14084					0.09298216413208138
IPVEIIMLP	9	Unmodified	_IPVEIIMLP_					0	0	0		tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1024.611743152142	1	1024.61112	1023.60384	3.4863	0.0035721	-4.0443	-0.0041439	-0.558	-0.00057173	1024.6072520680905	97.217	0.16703	97.523	97.427	97.594	0.3062					9	6	2	0	0	0	0.12174	1	40887	40887		42.095	6.0504	1	32270000			11582	16201	5790	5815	14086	14086					0.09298216413208138
IPVEIIMLPL	10	Unmodified	_IPVEIIMLPL_					0	0	0		tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	tr|A0A553SII1|A0A553SII1_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14890PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3557617068291	2	569.351228	1136.6879	3.4715	0.0019765	3.8231	0.0021767	7.2947	0.0041532	569.3535609307654	99.285	0.12371	99.483	99.406	99.529	0.19767					8	3	3	0	0	0	0.22411	1	41802	41802		46.021	2.1627	1	7110100			11583	16201	5791	5816	14087	14087					0.1250274751012057
IPVWDQEFL	9	Unmodified	_IPVWDQEFL_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7963134646416	2	573.795132	1145.57571	2.6255	0.0015065	-1.1225	-0.00064411	1.503	0.00086241	573.7947309337399	80.583	0.54308	81.834	81.608	82.151	1.2512					38	17	3	0	0	0	0.059546	3	33845	33796;33845;33901		64.236	35.155	1	5823500			11584	1827	5792	5817	14088;14089;14090	14089					0.008746097574885425
IPVWDQEFL	9	Unmodified	_IPVWDQEFL_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.7959472537041	2	573.795132	1145.57571	1.1624	0.000667	-0.29101	-0.00016698	0.87142	0.00050002	573.7953367589627	80.115	0.57059	81.832	81.6	82.17	1.7167					35	18	3	0	0	0	0.042029	2	33638	33586;33638		74.423	40.32	1	5865300			11585	1827	5792	5817	14091;14092	14092					0.008746097574885425
IPWNYPLLMAL	11	Unmodified	_IPWNYPLLMAL_					0	0	0		tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	665.8696166872978	2	665.865034	1329.71552	3.9344	0.0026198	1.4629	0.00097407	5.3973	0.0035939	665.8678376107483	90.768	0.22249	91.749	91.59	91.812	0.98157					9	6	2	0	0	0	0.88318	1	38228	38228		10.824	0	1	677750			11586	17019	5793	5818	14093	14093					0.0638465077033743
IPWNYPLLMAL	11	Unmodified	_IPWNYPLLMAL_					0	0	0		tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	665.865034	1329.71552	2.573	0.0017133	4.7724	0.0031777	7.3454	0.004891	665.8678462930791	91.506	0.15971	91.697	91.627	91.786	0.19041	-0.027039	0.001272	NaN	10.824	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265840			11587	17019	5793	5818							0.0638465077033743
IPWNYPLLMAL	11	Unmodified	_IPWNYPLLMAL_					0	0	0		tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	tr|A0A7D6W1D6|A0A7D6W1D6_9CLOTAldehydedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02350PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	665.865034	1329.71552	3.7791	0.0025164	2.9465	0.001962	6.7256	0.0044784	665.8668441566507	90.359	0.16073	91.725	91.607	91.767	1.366	0.0015589	-0.0011595	NaN	10.824	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	364540			11588	17019	5793	5818							0.0638465077033743
IPYHSEVPVSL	11	Unmodified	_IPYHSEVPVSL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.8347656130791	2	620.832246	1239.64994	1.8858	0.0011708	2.2166	0.0013761	4.1024	0.0025469	620.8331399762303	45.409	0.35421	46.774	46.628	46.982	1.3653					30	10	4	0	0	0	0.02806	2	19056	19015;19056		81.89	31.957	1	3284200			11589	1912	5794	5819	14094;14095	14095					0.039699528490018565
IPYHSEVPVSL	11	Unmodified	_IPYHSEVPVSL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.8331786990166	2	620.832246	1239.64994	1.4526	0.0009018	1.7228	0.0010696	3.1754	0.0019714	620.8331244491277	44.948	0.44394	46.907	46.671	47.115	1.9596					33	13	3	0	0	0	0.02806	3	18838	18795;18838;18877		81.89	31.957	1	3070800			11590	1912	5794	5819	14096;14097;14098	14097					0.039699528490018565
IQAQHQRYL	9	Unmodified	_IQAQHQRYL_					0	0	0			REV__ENST00000591789.1_1_19:45989311-45991830:-|nuORF	REV__ENST00000591789.1_1_19:45989311-45991830:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.8165771365166	2	578.814722	1155.61489	2.0163	0.0011671	2.5996	0.0015047	4.6159	0.0026718	578.8159316761786	92.013	0.34497	92.013	91.819	92.164	0					17	10	2	0	0	0	0.68551	1	38474	38474		7.9102	3.1541	1	740970	+		11591	9676	5795	5820	14099	14099					0.04330754831721606
IQDFEMPTV	9	Unmodified	_IQDFEMPTV_					0	0	0		nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10;ENSG00000115761|ENST00000381685|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2589599490166	2	540.257525	1078.5005	3.317	0.001792	1.6027	0.00086586	4.9197	0.0026579	540.2589739911816	60.697	0.59941	62.117	61.841	62.441	1.4196					43	18	3	0	0	0	0.10473	3	25463	25412;25463;25517		47.749	9.7747	1	1919800			11592	1935	5796	5821	14100;14101;14102	14101					-0.03561315765273321
IQDFEMPTV	9	Unmodified	_IQDFEMPTV_					0	0	0		nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10;ENSG00000115761|ENST00000381685|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2603027224541	2	540.257525	1078.5005	3.2975	0.0017815	-0.074029	-3.9995E-05	3.2234	0.0017415	540.2577004950404	60.245	0.40931	62.211	61.915	62.324	1.9653					29	12	3	0	0	0	0.093059	2	25290	25242;25290		51.63	9.5352	1	3121400			11593	1935	5796	5821	14103;14104	14104					-0.03561315765273321
IQDFEMPTV	9	Unmodified	_IQDFEMPTV_					0	0	0		nc|ENSG00000115761|Q9BSC4-2|NOL10;nc|ENSG00000115761|Q9BSC4-4|NOL10;ENSG00000115761|ENST00000381685|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	nc|ENSG00000115761|Q9BSC4-2|NOL10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	540.257525	1078.5005	2.0253	0.0010942	1.5362	0.00082996	3.5615	0.0019241	540.2581656735457	62.16	0.31239	62.16	61.993	62.305	0	0.020469	0.00070858	NaN	51.63	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556390			11594	1935	5796	5821							-0.03561315765273321
IQEAGTEVVK	10	Unmodified	_IQEAGTEVVK_					0	0	0		ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2;MDH2|p.M266*|1|0.12|ENSG00000146701|chr7:76064863-76064863|A/-|frameshift_variant	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2954589724541	2	537.295496	1072.57644	0.34926	0.00018765	-0.06577	-3.5338E-05	0.28349	0.00015232	537.295277918949	14.666	0.11787	15.562	15.502	15.62	0.89664					7	3	3	0	0	0	0.10428	1	6084	6084		63.227	7.0505	1	1514700			11595	3160	5797	5822	14105	14105					0.04305404406522939
IQEAGTEVVK	10	Unmodified	_IQEAGTEVVK_					0	0	0		ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2;MDH2|p.M266*|1|0.12|ENSG00000146701|chr7:76064863-76064863|A/-|frameshift_variant	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	537.295496	1072.57644	0.2494	0.000134	1.3045	0.00070091	1.5539	0.00083491	537.2960137336568	14.733	0.11807	15.503	15.432	15.55	0.76937	-0.029805	0.0007682	NaN	63.227	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1079100			11596	3160	5797	5822							0.04305404406522939
IQESLDTLSET	11	Unmodified	_IQESLDTLSET_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|15|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|15|1|sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|15|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	618.3051025271416	2	618.303715	1234.59288	1.9962	0.0012343	-0.6045	-0.00037376	1.3917	0.00086052	618.3033328636932	71.868	0.34703	71.868	71.7	72.047	0					31	10	4	0	0	0	0.82375	1	29894	29894		14.405	0.49933	1	3155800			11597	7773	5798	5823	14106	14106					-0.015035592180765889
IQFLLLWLV	9	Unmodified	_IQFLLLWLV_					0	0	0		nc|ENSG00000153956|P54289-4|CACNA2D1;nc|ENSG00000153956|P54289-5|CACNA2D1;nc|ENSG00000153956|P54289-3|CACNA2D1;ENSG00000153956|ENST00000356860|CACNA2D1;nc|ENSG00000153956|P54289|CACNA2D1	nc|ENSG00000153956|P54289-4|CACNA2D1	nc|ENSG00000153956|P54289-4|CACNA2D1	MSMS	GG20161007_CRH_Patient100_W632_02	4	382.2431518435478	3	382.242477	1143.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.886	1	47.857	47.357	48.357	1.9703								0	0	0	0.22015	1	19222	19222		17.113	0.54702	1				11598	3371	5799	5824	14107	14107					0.13949830827255028
IQFTKRIQNIV	11	Unmodified	_IQFTKRIQNIV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	453.9436828494072	3	453.94175	1358.80342	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.367	1	12.456	11.956	12.956	0.089381								0	0	0	0.63775	1	5132	5132		1.1098	0	1				11599	3425;7900	5800	5825	14108	14108					0.1383698768531758
IQGATLLLF	9	Unmodified	_IQGATLLLF_					0	0	0		nc|ENSG00000139370|Q8N697-2|SLC15A4;ENSG00000139370|ENST00000266771|SLC15A4	nc|ENSG00000139370|Q8N697-2|SLC15A4	nc|ENSG00000139370|Q8N697-2|SLC15A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.3004333376884	2	488.29731	974.580068	2.7547	0.0013451	-0.76718	-0.00037461	1.9875	0.00097051	488.29687679818426	80.646	0.30096	81.879	81.711	82.012	1.2332					17	9	2	0	0	0	0.11643	1	33836	33836		43.858	3.901	1	2427200			11600	2875	5801	5826	14109	14109					0.09176118971049618
IQGATLLLF	9	Unmodified	_IQGATLLLF_					0	0	0		nc|ENSG00000139370|Q8N697-2|SLC15A4;ENSG00000139370|ENST00000266771|SLC15A4	nc|ENSG00000139370|Q8N697-2|SLC15A4	nc|ENSG00000139370|Q8N697-2|SLC15A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2991821169853	2	488.29731	974.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.142	1	81.859	81.359	82.359	1.7167								0	0	0	0.11571	1	33613	33613		32.305	2.0807	1				11601	2875	5801	5826	14110	14110					0.09176118971049618
IQGRPVRQRR	10	Unmodified	_IQGRPVRQRR_					0	0	0			REV__ENST00000535658.1_1_16:57023523-57024688:+|nuORF	REV__ENST00000535658.1_1_16:57023523-57024688:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1964599490166	4	317.196994	1264.75887	1.0711	0.00033975	-1.9649	-0.00062326	-0.89379	-0.00028351	317.1961583985246	40.829	1.8044	42.154	41.038	42.843	1.3254					142	57	4	0	0	0	0.8974	1	17212	17212		1.7423	0	1	3140200	+		11602	13746	5802	5827	14111	14111					0.13708021382490188
IQHDLIFSL	9	Unmodified	_IQHDLIFSL_					0	0	0		nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3027221560478	2	543.303124	1084.5917	2.4232	0.0013166	-0.78934	-0.00042885	1.6339	0.0008877	543.3023778838877	63.978	0.35171	65.385	65.24	65.591	1.4071					26	10	3	0	0	0	0.024001	1	26811	26811		96.111	3.6195	1	5413100			11603	1295	5803	5828	14112	14112					0.05278315994382865
IQHDLIFSL	9	Unmodified	_IQHDLIFSL_					0	0	0		nc|ENSG00000100644|Q16665-2|HIF1A;ENSG00000100644|ENST00000337138|HIF1A;nc|ENSG00000100644|Q16665-3|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	nc|ENSG00000100644|Q16665-2|HIF1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3023559451103	2	543.303124	1084.5917	2.5835	0.0014036	-1.6559	-0.00089964	0.92765	0.00050399	543.3019162571022	63.479	0.32093	65.423	65.216	65.537	1.9444					26	9	3	0	0	0	0.053939	1	26581	26581		66.457	14.827	1	4300400			11604	1295	5803	5828	14113	14113					0.05278315994382865
IQHSEFEEV	9	Unmodified	_IQHSEFEEV_					0	0	0		nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;ENSG00000108175|ENST00000334512|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2632934451103	2	559.261653	1116.50875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.209	1	24.424	23.924	24.924	1.2145								0	0	0	0.35665	1	9701	9701		13.042	5.7532	1				11605	1623	5804	5829	14114	14114					-0.0448404552428201
IQHSEFEEV	9	Unmodified	_IQHSEFEEV_					0	0	0		nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;ENSG00000108175|ENST00000334512|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2623168826103	2	559.261653	1116.50875	0.49985	0.00027955	1.5327	0.00085718	2.0325	0.0011367	559.2626826721056	22.823	0.18591	24.474	24.375	24.56	1.6511					13	5	3	0	0	0	0.57699	1	9529	9529		12.241	2.8575	1	420240			11606	1623	5804	5829	14115	14115					-0.0448404552428201
IQIKQRRQNR	10	Unmodified	_IQIKQRRQNR_					0	0	0			REV__ENST00000342992.10_3_2:179484830-179485015:-|nuORF	REV__ENST00000342992.10_3_2:179484830-179485015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	447.2734252810478	3	447.272493	1338.79565	4.0749	0.0018226	-1.6888	-0.00075536	2.3861	0.0010672	447.27071834477385	96.442	0.21617	96.726	96.589	96.806	0.28442					19	6	4	0	0	0	0.8974	1	40568	40568		1.7423	0.41263	1	12354000	+		11607	12508	5805	5830	14116	14116					0.1398027320840356
IQINGLARSL	10	Unmodified	_IQINGLARSL_					0	0	0			REV__PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	REV__PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8325073122978	2	542.827298	1083.64004	2.922	0.0015861	3.3042	0.0017936	6.2262	0.0033798	542.8295430168296	62.036	1.3291	63.993	63.497	64.826	1.9571					94	42	3	0	0	0	0.25819	1	26097	26097		41.84	1.8823	1	2366800	+		11608	8535	5806	5831	14117	14117					0.10156809634281672
IQISYFSIQ	9	Unmodified	_IQISYFSIQ_					0	0	0		ENST00000335154.9_1_12:50032767-50032947:-|nuORF	ENST00000335154.9_1_12:50032767-50032947:-|nuORF	ENST00000335154.9_1_12:50032767-50032947:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7961303591728	2	549.795132	1097.57571	2.8404	0.0015616	0.63979	0.00035176	3.4802	0.0019134	549.7951883803995	74.535	0.41356	76.327	76.047	76.461	1.7921					39	12	4	0	0	0	0.30098	1	31254	31254		25.399	4.9457	1	3184000			11609	5906	5807	5832	14118	14118					0.030826097574845335
IQKKKIFIRK	10	Unmodified	_IQKKKIFIRK_					0	0	0		NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1302.879931628704	1	1301.87799	1300.87071	-0.43849	-0.00057086	2.4992	0.0032537	2.0608	0.0026829	1302.8845517701748	56.989	0.1479	58.957	58.845	58.992	1.9684					6	4	2	0	0	0	0.89803	1	23886	23886		1.6526	0.17072	1	2692900			11610	7808	5808	5833	14119	14119					0.23231062686886617
IQKKRFYLDV	10	Unmodified	_IQKKRFYLDV_					0	0	0		nc|ENSG00000172733|Q9UJV8-2|PURG;ENSG00000172733|ENST00000523392|PURG	nc|ENSG00000172733|Q9UJV8-2|PURG	nc|ENSG00000172733|Q9UJV8-2|PURG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.3867065310478	2	655.38498	1308.75541	2.4158	0.0015833	-1.5776	-0.0010339	0.83816	0.00054932	655.3831831507614	80.195	1.2576	81.446	80.863	82.12	1.2512					70	40	2	0	0	0	0.89588	1	33745	33745		3.9444	0	1	2233500			11611	4250	5809	5834	14120	14120					0.11337913765260055
IQLVIKVF	8	Unmodified	_IQLVIKVF_					0	0	0		nc|ENSG00000198625|O15151-4|MDM4;nc|ENSG00000198625|O15151-5|MDM4;ENSG00000198625|ENST00000367182|MDM4	nc|ENSG00000198625|O15151-4|MDM4	nc|ENSG00000198625|O15151-4|MDM4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	479.7680847048759	2	480.318046	958.621539	3.0437	0.0014619	-0.61686	-0.00029629	2.4268	0.0011656	480.31771815197754	70.342	0.44603	71.695	71.491	71.937	1.3536					31	13	3	0	0	0	2.3239	1	29596	29596		9.3474	0	1	5004600			11612	5062	5810	5835	14121	14121					0.14057299730370687
IQLVPEQWL	9	Unmodified	_IQLVPEQWL_					0	0	0			REV__ENST00000524591.6_1_8:12878711-12878915:+|nuORF	REV__ENST00000524591.6_1_8:12878711-12878915:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3182861208916	2	563.318774	1124.623	2.1076	0.0011873	0.21518	0.00012122	2.3228	0.0013085	563.3183263051096	88.165	0.36629	88.165	87.999	88.365	0					18	11	2	0	0	0	0.61249	1	36878	36878		10.824	0.75	1	997960	+		11613	13650	5811	5836	14122	14122					0.06566889028476908
IQLVPEQWL	9	Unmodified	_IQLVPEQWL_					0	0	0			REV__ENST00000524591.6_1_8:12878711-12878915:+|nuORF	REV__ENST00000524591.6_1_8:12878711-12878915:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.8218261599541	2	563.318774	1124.623	2.5093	0.0014135	-1.2001	-0.00067601	1.3092	0.00073752	563.3178781751456	87.727	0.49886	87.962	87.855	88.354	0.23471					29	15	2	0	0	0	0.59203	1	36782	36782		11.64	0.81637	1	1196100	+		11614	13650	5811	5836	14123	14123					0.06566889028476908
IQNEKRKSENK	11	Unmodified	_IQNEKRKSENK_					0	0	0		tr|A0A553SLH8|A0A553SLH8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20660PE=4SV=1	tr|A0A553SLH8|A0A553SLH8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20660PE=4SV=1	tr|A0A553SLH8|A0A553SLH8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20660PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1725036501884	3	458.588035	1372.74228	0.70267	0.00032224	0.033759	1.5482E-05	0.73643	0.00033772	458.58761950879136	14.349	0.12465	14.349	14.256	14.38	0					6	3	2	0	0	0	0.14606	1	5923	5923		2.2527	0	1	379770			11615	16332	5812	5837	14124	14124					0.07081430915218334
IQRRHLQVG	9	Unmodified	_IQRRHLQVG_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8315917849541	2	553.830706	1105.64686	2.1408	0.0011856	0.023281	1.2894E-05	2.1641	0.0011985	553.8306741234597	87.589	0.41185	87.589	87.378	87.79	0					36	13	4	0	0	0	0.83753	1	36553	36553		1.8442	0	1	6180900			11616	6535	5813	5838	14125	14125					0.09826167305504896
IQRSYTLRRKR	11	Unmodified	_IQRSYTLRRKR_					0	0	0		ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	ENSG00000133302|ENST00000265140|SLF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.9719421267509	3	492.967181	1475.87971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.976	1	89.423	88.923	89.923	1.4467								0	0	0	0.63775	1	37083	37083		0.40827	0.31342	1				11617	2567	5814	5839	14126	14126					0.16080804305261154
IQSKKKVHKPK	11	Unmodified	_IQSKKKVHKPK_					0	0	0		ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B;FAM111B|p.E418Gfs*12|1|0.09|ENSG00000189057|chr11:59125346-59125347|-/G|frameshift_variant	ENSG00000189057|ENST00000343597|FAM111B	ENSG00000189057|ENST00000343597|FAM111B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	330.9663879275322	4	330.967311	1319.84014	-1.7417	-0.00057644	-4.4095	-0.0014594	-6.1512	-0.0020358	330.96685532672734	64.87	0.44794	64.87	64.56	65.008	0					27	13	3	0	0	0	1.0365	1	27015	27015		1.2148	0	1	1466200			11618	4893	5815	5840	14127	14127					0.19301284301855048
IQYLLQSYW	9	Unmodified	_IQYLLQSYW_					0	0	0			REV__ENSG00000164690|ENST00000297261|SHH	REV__ENSG00000164690|ENST00000297261|SHH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	607.2100707888603	2	607.316232	1212.61791	2.2791	0.0013841	-2.2181	-0.0013471	0.061011	3.7053E-05	607.3145883914231	39.559	0.14527	40.869	40.82	40.965	1.3102					6	4	2	0	0	0	0.11812	1	16624	16624		0	0	1	537580	+		11619	10745	5816	5841	14128	14128					0.020105851658627216
IRAAIKHV	8	Unmodified	_IRAAIKHV_					0	0	0			REV__ENSG00000104112|ENST00000220478|SCG3	REV__ENSG00000104112|ENST00000220478|SCG3	MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1982604861259	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.29	1	53.266	52.766	53.766	1.9753								0	0	0	1.0178	1	21495	21495		1.6526	1.1943	1		+		11620	9125	5817	5842	14129	14129					0.11929493987850037
IRCLAPKPV	9	Unmodified	_IRCLAPKPV_					0	0	0		ENST00000604660.1_1_4:185428414-185430663:-|nuORF	ENST00000604660.1_1_4:185428414-185430663:-|nuORF	ENST00000604660.1_1_4:185428414-185430663:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8716613650322	3	332.872279	995.595007	0.393	0.00013082	-1.3521	-0.00045009	-0.95915	-0.00031927	332.87203643665947	38.016	0.52402	39.836	39.701	40.225	1.8202					69	16	5	0	0	0	0.77526	1	15923	15923		2.4985	0.84587	1	258050000			11621	7553	5818	5843	14130	14130					0.09703287567378993
IRDLTRKFR	9	Unmodified	_IRDLTRKFR_					0	0	0			REV__nc|ENSG00000139737|Q8ND83-4|SLAIN1	REV__nc|ENSG00000139737|Q8ND83-4|SLAIN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.2491638064384	3	402.247285	1203.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	104.05	103.55	104.55	0.059502								0	0	0	0.42693	1	43762	43762		0.96228	0.33545	1		+		11622	14445	5819	5844	14131	14131					0.12631296028121142
IRDLTRKFR	9	Unmodified	_IRDLTRKFR_					0	0	0			REV__nc|ENSG00000139737|Q8ND83-4|SLAIN1	REV__nc|ENSG00000139737|Q8ND83-4|SLAIN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.2486450076103	3	402.247285	1203.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.89	1	104.06	103.56	104.56	0.1731								0	0	0	0.42693	1	43852	43852		0.96228	0.33545	1		+		11623	14445	5819	5844	14132	14132					0.12631296028121142
IREEYPDR	8	Unmodified	_IREEYPDR_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000511806.1_1_12:34318446-34318629:-|nuORF;ENST00000404155.1_1_6:3177457-3179994:-|nuORF;ENSG00000261456|ENST00000568584|TUBB8;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000101162|ENST00000217133|TUBB1;CON__ENSEMBL:ENSBTAP00000025008	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.8486205935478	3	359.848967	1076.52507	-1.4622	-0.00052618	0.27949	0.00010057	-1.1827	-0.00042561	359.84909918073686	11.986	0.15613	12.68	12.602	12.759	0.69396					8	4	2	0	0	0	0.74295	1	4979	4979		21.59	10.095	1	918470			11624	4854	5820	5845	14133	14133					-0.010129195675290248
IREEYPDR	8	Unmodified	_IREEYPDR_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;ENST00000511806.1_1_12:34318446-34318629:-|nuORF;ENST00000404155.1_1_6:3177457-3179994:-|nuORF;ENSG00000261456|ENST00000568584|TUBB8;ENSG00000173213|ENST00000308911|TUBB8B;ENSG00000101162|ENST00000217133|TUBB1;CON__ENSEMBL:ENSBTAP00000025008	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.8495056033134	3	359.848967	1076.52507	-0.30722	-0.00011055	0.13184	4.7441E-05	-0.17539	-6.3112E-05	359.8492636978838	11.857	0.12497	12.644	12.568	12.693	0.78751					8	3	3	0	0	0	0.50132	1	4919	4919		40.725	22.004	1	1021100			11625	4854	5820	5845	14134	14134					-0.010129195675290248
IRELVLPLAQQ	11	Unmodified	_IRELVLPLAQQ_					0	0	0			REV__tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	REV__tr|A0A553STW5|A0A553STW5_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7008239626884	4	320.698769	1278.76597	1.3893	0.00044555	2.5401	0.0008146	3.9294	0.0012602	320.6997533231677	40.294	1.1013	42.157	41.987	43.089	1.8624					85	34	3	0	0	0	1.0156	1	16857	16857		2.8433	0.93691	1	190230000	+		11626	15265	5821	5846	14135	14135					0.13773896419684206
IRERLLPFTF	10	Unmodified	_IRERLLPFTF_					0	0	0		ENSG00000100441|ENST00000553935|KHNYN	ENSG00000100441|ENST00000553935|KHNYN	ENSG00000100441|ENST00000553935|KHNYN	MSMS	GG20161007_CRH_Patient100_W632_01	3	646.3813964724541	2	646.379697	1290.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.331	1	91.312	90.812	91.812	0.98157								0	0	0	0.66166	1	38060	38060		1.6526	0	1				11627	1280	5822	5847	14136	14136					0.11109931110809157
IRFKHLFWWWF	11	Unmodified	_IRFKHLFWWWF_					0	0	0			REV__nc|ENSG00000166262|Q96M60-2|FAM227B	REV__nc|ENSG00000166262|Q96M60-2|FAM227B	MSMS	GG20161007_CRH_Patient100_W632_01	3	833.4437744021416	2	833.445706	1664.87686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.181	1	85.369	84.869	85.869	1.1879								0	0	0	0.63775	1	35325	35325		0	0	1		+		11628	14478	5823	5848	14137	14137					0.07101580918424588
IRGRVHFRLVA	11	Unmodified	_IRGRVHFRLVA_					0	0	0			REV__ENST00000577537.5_1_17:20790991-20791060:+|nuORF	REV__ENST00000577537.5_1_17:20790991-20791060:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7061645388603	4	331.708466	1322.80476	-1.7442	-0.00057856	-3.4202	-0.0011345	-5.1644	-0.0017131	331.70730387911135	44.202	0.78959	44.202	43.682	44.472	0					72	24	4	0	0	0	1.0357	1	18502	18502		1.4551	0.24029	1	3789400	+		11629	13988	5824	5849	14138	14138					0.15626666564753577
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.0609313845634	5	315.806839	1573.99781	0.85681	0.00027059	-0.59229	-0.00018705	0.26452	8.3537E-05	315.8066891621091	45.409	1.1748	46.774	46.464	47.639	1.3653					66	36	2	0	0	0	0.14606	1	19274	19274		0	0	1	10062000			11630	7500	5825	5850	14139	14139					0.23377221404462034
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5570556521416	4	394.506729	1573.99781	1.5743	0.00062107	-1.0379	-0.00040944	0.53643	0.00021163	394.5064850158154	45.409	1.3012	46.775	46.401	47.702	1.3653					118	40	4	0	0	0	0.14606	1	18888	18888		0	0	1	22354000			11631	7500	5825	5850	14140	14140					0.23377221404462034
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5574218630791	4	394.506729	1573.99781	1.8515	0.00073044	-1.2869	-0.0005077	0.56458	0.00022273	394.50569065516896	47.552	0.2229	48.935	48.825	49.048	1.3825					10	6	2	0	0	0	0.14606	1	19878	19878		0	0	1	1101500			11632	7500	5825	5850	14141	14141					0.23377221404462034
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	316.0608093142509	5	315.806839	1573.99781	1.0644	0.00033613	-0.95029	-0.00030011	0.11407	3.6024E-05	315.80655080448696	44.952	1.1719	46.912	46.639	47.81	1.9596					67	36	2	0	0	0	0.14606	1	19178	19178		0	0	1	11126000			11633	7500	5825	5850	14142	14142					0.23377221404462034
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	316.1757079958916	5	315.806839	1573.99781	0.98751	0.00031186	-0.60728	-0.00019178	0.38023	0.00012008	315.80667874238605	46.405	1.1413	48.375	47.852	48.993	1.9703					58	36	2	0	0	0	0.14606	1	19665	19665		0	0	1	8614800			11634	7500	5825	5850	14143	14143					0.23377221404462034
IRHRRRKQLRR	11	Unmodified	_IRHRRRKQLRR_					0	0	0		ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		5	315.806839	1573.99781	0.73537	0.00023224	-0.50389	-0.00015913	0.23148	7.3104E-05	315.80671537499484	46.762	1.0703	48.145	47.689	48.759	1.3825	-0.11524	8.5282E-05	NaN	0	58	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6573000			11635	7500	5825	5850							0.23377221404462034
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9732543826103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7819	1	9.7819	9.2819	10.282	0								0	0	0	0.63775	1	4028	4028		0	0	1				11636	2743	5826	5851	14144	14144					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9723388552666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.695	1	15.695	15.195	16.195	0								0	0	0	0.63775	1	6517	6517		0	0	1				11637	2743	5826	5851	14145	14145					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9687377810478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.566	1	21.566	21.066	22.066	0								0	0	0	0.63775	1	8968	8968		0.30703	0	1				11638	2743	5826	5851	14146	14146					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9705078005791	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.374	1	29.374	28.874	29.874	0								0	0	0	0.63775	1	12296	12296		1.3295	0	1				11639	2743	5826	5851	14147	14147					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9708740115166	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.652	1	29.652	29.152	30.152	0								0	0	0	0.63775	1	12414	12414		1.3295	0	1				11640	2743	5826	5851	14148	14148					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9697143435478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.26	1	34.26	33.76	34.76	0								0	0	0	0.63775	1	14359	14359		1.3295	0	1				11641	2743	5826	5851	14149	14149					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9729492068291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.378	1	34.378	33.878	34.878	0								0	0	0	0.63775	1	14410	14410		1.3295	0	1				11642	2743	5826	5851	14150	14150					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9716674685478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.501	1	34.501	34.001	35.001	0								0	0	0	0.63775	1	14462	14462		1.3295	0	1				11643	2743	5826	5851	14151	14151					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9689208865166	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.899	1	34.899	34.399	35.399	0								0	0	0	0.63775	1	14627	14627		1.3295	0	1				11644	2743	5826	5851	14152	14152					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9702026247978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.859	1	42.859	42.359	43.359	0								0	0	0	0.63775	1	17938	17938		1.3295	0	1				11645	2743	5826	5851	14153	14153					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9684936404228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.064	1	43.064	42.564	43.564	0								0	0	0	0.63775	1	18027	18027		1.3295	0	1				11646	2743	5826	5851	14154	14154					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719116091728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.132	1	45.132	44.632	45.632	0								0	0	0	0.63775	1	18886	18886		1.3295	0	1				11647	2743	5826	5851	14155	14155					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9722778201103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.639	1	45.639	45.139	46.139	0								0	0	0	0.63775	1	19095	19095		1.3295	0	1				11648	2743	5826	5851	14156	14156					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9694702029228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.813	1	47.813	47.313	48.313	0								0	0	0	0.63775	1	19978	19978		1.3295	0	1				11649	2743	5826	5851	14157	14157					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9734374880791	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.162	1	48.162	47.662	48.662	0								0	0	0	0.63775	1	20118	20118		1.3295	0	1				11650	2743	5826	5851	14158	14158					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9750244021416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.86	1	54.86	54.36	55.36	0								0	0	0	0.63775	1	22857	22857		0.30703	0	1				11651	2743	5826	5851	14159	14159					0.24102270803723513
IRIILLYIFLK	11	Unmodified	_IRIILLYIFLK_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9733764529228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.369	1	59.369	58.869	59.869	0								0	0	0	0.63775	1	24755	24755		0.30703	0	1				11652	2743	5826	5851	14160	14160					0.24102270803723513
IRKALAIF	8	Unmodified	_IRKALAIF_					0	0	0			REV__tr|A0A7D6W244|A0A7D6W244_9CLOT1-acyl-sn-glycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05075PE=4SV=1	REV__tr|A0A7D6W244|A0A7D6W244_9CLOT1-acyl-sn-glycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05075PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1351196169853	3	311.207767	930.601472	-1.9086	-0.00059397	-4.3633	-0.0013579	-6.2719	-0.0019519	311.20640846284635	60.377	0.23811	60.377	60.174	60.412	0					11	7	2	0	0	0	2.3239	1	25193	25193		0.45834	0	1	1476600	+		11653	15600	5827	5852	14161	14161					0.13339548790395384
IRKKNVHKIAV	11	Unmodified	_IRKKNVHKIAV_					0	0	0			REV__nc|ENSG00000159899|P20594-2|NPR2	REV__nc|ENSG00000159899|P20594-2|NPR2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.0089294314384	4	327.217395	1304.84047	-1.7652	-0.0005776	2.7509	0.00090015	0.98572	0.00032254	327.2173094681492	51.658	0.21706	51.658	51.508	51.725	0					13	6	3	0	0	0	0.14606	1	21553	21553		0.08335	0.08335	1	466630	+		11654	10584	5828	5853	14162	14162					0.20024704021739126
IRKRRRRWIQV	11	Unmodified	_IRKRRRRWIQV_					0	0	0		tr|A0A553SH54|A0A553SH54_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_12170PE=3SV=1	tr|A0A553SH54|A0A553SH54_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_12170PE=3SV=1	tr|A0A553SH54|A0A553SH54_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_12170PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.0451232790947	5	314.20438	1565.98552	0.59139	0.00018582	1.0036	0.00031534	1.595	0.00050116	314.2045757123946	58.296	0.22544	60.265	60.084	60.31	1.969					8	6	2	0	0	0	0.14606	1	24462	24462		0	0	1	1163100			11655	16135	5829	5854	14163	14163					0.22516184941446227
IRKRYTRN	8	Unmodified	_IRKRYTRN_					0	0	0			REV__ENSG00000007384|ENST00000262316|RHBDF1	REV__ENSG00000007384|ENST00000262316|RHBDF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8315307497978	2	553.830706	1105.64686	2.4367	0.0013495	-0.9516	-0.00052702	1.4851	0.00082248	553.8300287508691	73.86	1.3555	74.185	73.912	75.267	0.32494					102	42	3	0	0	0	0.89181	1	30816	30816		0.6015	0	1	2448400	+		11656	8516	5830	5855	14164	14164					0.09826167305504896
IRKSKKKKRR	10	Unmodified	_IRKSKKKKRR_					0	0	0		ENSG00000160818|ENST00000368232|GPATCH4;nc|ENSG00000160818|Q5T3I0-3|GPATCH4	ENSG00000160818|ENST00000368232|GPATCH4	ENSG00000160818|ENST00000368232|GPATCH4	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4637939333916	2	664.459679	1326.90481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.48	1	108.48	107.98	108.98	0								0	0	0	0.66243	1	46752	46752		0.35063	0.35063	1				11657	3578	5831	5856	14165	14165					0.25442903898533586
IRKYYNKK	8	Unmodified	_IRKYYNKK_					0	0	0			REV__nc|ENSG00000121579|Q9GZZ1-2|NAA50	REV__nc|ENSG00000121579|Q9GZZ1-2|NAA50	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	556.3329345583916	2	556.832383	1111.65021	0.70621	0.00039324	2.5784	0.0014357	3.2846	0.001829	556.8341374532719	103.49	0.097778	103.49	103.43	103.52	0					6	4	2	0	0	0	2.3239	1	43460	43460		0.69038	0.088878	1	17887000	+		11658	9590	5832	5857	14166	14166					0.09885417359487292
IRKYYNKK	8	Unmodified	_IRKYYNKK_					0	0	0			REV__nc|ENSG00000121579|Q9GZZ1-2|NAA50	REV__nc|ENSG00000121579|Q9GZZ1-2|NAA50	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	556.832383	1111.65021	3.1295	0.0017426	3.8589	0.0021488	6.9884	0.0038914	556.8352611663098	103.03	0.14258	103.19	103.06	103.21	0.16445	-0.15097	0.00086607	NaN	0.69038	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	295280	+		11659	9590	5832	5857							0.09885417359487292
IRLKRIFIK	9	Unmodified	_IRLKRIFIK_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	594.3135864138603	2	593.910968	1185.80738	3.1964	0.0018983	4.3138	0.002562	7.5101	0.0044603	594.4148312674035	105.68	0.40862	105.84	105.55	105.96	0.15859					26	20	2	0	0	0	0.11948	1	45079	45079		0.52476	0.17413	1	4647900	+		11660	14373	5833	5858	14167	14167					0.22191121969672167
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4803039431572	4	334.479649	1333.88949	0.15656	5.2368E-05	-1.9559	-0.0006542	-1.7993	-0.00060183	334.48033157320106	22.286	1.7562	22.509	22.173	23.929	0.223					274	57	7	0	0	0	0.89803	1	9374	9374		0.15932	0	1	820460000	+		11661	13696	5834	5859	14168	14168					0.2359003710134857
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	668.4521362185478	2	667.952021	1333.88949	0.73287	0.00048952	-2.0757	-0.0013865	-1.3428	-0.00089695	667.9507296721135	24.16	0.73144	24.402	24.073	24.804	0.24251					60	23	3	0	0	0	0.89803	1	10033	10033		0.40072	0.40072	1	1751200	+		11662	13696	5834	5859	14169	14169					0.2359003710134857
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4799072146416	4	334.479649	1333.88949	0.36211	0.00012112	-3.3312	-0.0011142	-2.9691	-0.0009931	334.47876618496844	26.168	2.3423	26.43	25.684	28.027	0.26173					307	76	6	0	0	0	0.89803	1	10778	10778		0.15932	0.064481	1	151020000	+		11663	13696	5834	5859	14170	14170					0.2359003710134857
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4796325564384	4	334.479649	1333.88949	-0.2731	-9.1347E-05	-1.69	-0.00056527	-1.9631	-0.00065662	334.4804280186109	21.223	1.6253	22.349	21.926	23.551	1.1254					249	50	7	0	0	0	0.89803	1	8977	8977		0.77653	0.32202	1	740700000	+		11664	13696	5834	5859	14171	14171					0.2359003710134857
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.6363098025322	3	445.637106	1333.88949	0.58837	0.0002622	-2.9554	-0.0013171	-2.3671	-0.0010549	445.6357405566276	20.759	0.86156	22.333	22.028	22.89	1.5748					88	28	4	0	0	0	0.89803	1	8544	8544		0.15932	0	1	56703000	+		11665	13696	5834	5859	14172	14172					0.2359003710134857
IRLVRLRRPR	10	Unmodified	_IRLVRLRRPR_					0	0	0			REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	REV__ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.6360961794853	3	445.637106	1333.88949	0.66612	0.00029685	-2.241	-0.00099866	-1.5748	-0.00070181	445.63607730417607	22.647	0.51523	24.299	24.201	24.716	1.6511					56	16	4	0	0	0	0.89803	1	9457	9457		0.15932	0	1	17181000	+		11666	13696	5834	5859	14173	14173					0.2359003710134857
IRNECYII	8	Unmodified	_IRNECYII_					0	0	0			REV__nc|ENSG00000151322|Q8IXF0-4|NPAS3	REV__nc|ENSG00000151322|Q8IXF0-4|NPAS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.2700073122978	2	512.268227	1022.5219	2.9867	0.00153	-0.17313	-8.869E-05	2.8136	0.0014413	512.2676983700029	78.51	0.71008	79.777	79.543	80.253	1.2668					84	22	6	0	0	0	0.86113	1	32934	32934		15.847	1.2655	1	3709700	+		11667	8259	5835	5860	14174	14174					0.011541140541226014
IRNEVRKSE	9	Unmodified	_IRNEVRKSE_					0	0	0			REV__ENSG00000152591|ENST00000651931|DSPP	REV__ENSG00000152591|ENST00000651931|DSPP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	376.8574096560478	3	377.5474	1129.62037	0.4591	0.00017333	-4.2501	-0.0016046	-3.791	-0.0014313	377.5459035003845	86.266	0.32791	86.266	86.039	86.367	0					16	10	2	0	0	0	0.11928	1	35889	35889		1.9064	1.4519	1	756880	+		11668	10427	5836	5861	14175	14175					0.0607443362353024
IRPLPRRRKR	10	Unmodified	_IRPLPRRRKR_					0	0	0			REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.7274658083916	4	337.728461	1346.88474	-2.3286	-0.00078645	-1.0176	-0.00034366	-3.3462	-0.0011301	337.7281567245779	24.629	0.12158	24.629	24.582	24.704	0					7	3	3	0	0	0	0.89803	1	10281	10281		0.62683	0.29755	1	3683600	+		11669	12309	5837	5862	14176	14176					0.22517152958562292
IRPLPRRRKR	10	Unmodified	_IRPLPRRRKR_					0	0	0			REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.7275878787041	4	337.728461	1346.88474	-2.2106	-0.00074659	-0.94717	-0.00031989	-3.1578	-0.0010665	337.97901584963046	27.335	0.42687	27.335	26.983	27.41	0					23	13	2	0	0	0	0.89803	1	11423	11423		0.62683	0.21856	1	2772700	+		11670	12309	5837	5862	14177	14177					0.22517152958562292
IRPLPRRRKR	10	Unmodified	_IRPLPRRRKR_					0	0	0			REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	337.728461	1346.88474	-2.3286	-0.00078645	-1.0176	-0.00034366	-3.3462	-0.0011301	337.7281567245779	24.629	0.12158	24.629	24.582	24.704	0	0	0	NaN	0.62683	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3683600	+		11671	12309	5837	5862							0.22517152958562292
IRPRMLVM	8	Unmodified	_IRPRMLVM_					0	0	0		ENST00000479187.5_1_12:40692272-40758932:+|nuORF;ENSG00000188906|ENST00000298910|LRRK2	ENST00000479187.5_1_12:40692272-40758932:+|nuORF	ENST00000479187.5_1_12:40692272-40758932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2999450564384	2	508.298807	1014.58306	2.3142	0.0011763	-0.43698	-0.00022212	1.8773	0.0009542	508.2984084120411	91.962	0.40897	91.962	91.725	92.134	0					28	12	3	0	0	0	0.89176	1	38382	38382		0.79363	0	1	1930600			11672	4884	5838	5863	14178	14178					0.07635347552547955
IRQRHVRKKRK	11	Unmodified	_IRQRHVRKKRK_					0	0	0		ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.0020324587822	4	376.999743	1503.96987	0.59221	0.00022326	4.1374	0.0015598	4.7296	0.001783	377.2513121581689	22.301	0.52645	22.524	22.205	22.731	0.223					22	17	2	0	0	0	1.0402	1	9306	9306		0.08335	0.08335	1	1804200			11673	7558	5839	5864	14179	14179					0.23803898424353065
IRQRHVRKKRK	11	Unmodified	_IRQRHVRKKRK_					0	0	0		ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000605810.1_1_3:70174691-70175321:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.0031005740166	4	376.999743	1503.96987	0.16315	6.1509E-05	2.1138	0.00079692	2.277	0.00085843	377.25013419581086	20.788	0.4438	22.362	22.208	22.652	1.5748					22	14	2	0	0	0	1.0402	1	8706	8706		0.08335	0.08335	1	1429400			11674	7558	5839	5864	14180	14180					0.23803898424353065
IRQRKSYR	8	Unmodified	_IRQRKSYR_					0	0	0		ENST00000584912.5_1_17:37006588-37006753:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8307983279228	2	553.830706	1105.64686	1.2785	0.00070807	-0.43451	-0.00024064	0.84399	0.00046743	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.89178	2	29949	29949;30624		0.69038	0.16561	1	6275300			11675	2272	5840	5865	14181;14182	14181					0.09826167305504896
IRQRKSYR	8	Unmodified	_IRQRKSYR_					0	0	0		ENST00000584912.5_1_17:37006588-37006753:-|nuORF;ENST00000584583.1_1_17:37006387-37006753:-|nuORF;ENSG00000125691|ENST00000479035|RPL23	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	ENST00000584912.5_1_17:37006588-37006753:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8311035037041	2	553.830706	1105.64686	2.4367	0.0013495	-0.9516	-0.00052702	1.4851	0.00082248	553.8300287508691	73.86	1.3555	74.185	73.912	75.267	0.32494					102	42	3	0	0	0	0.89178	1	30869	30869		0.69038	0.088878	1	2448400			11676	2272	5840	5865	14183	14183					0.09826167305504896
IRRAAVKIL	9	Unmodified	_IRRAAVKIL_					0	0	0		ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;SCN5A|p.L1157Sfs*58|1|0.3|ENSG00000183873|chr3:38576703-38576703|G/-|frameshift_variant;SCN5A|p.Q1483Pfs*49|1|0.1|ENSG00000183873|chr3:38555752-38555753|-/C|frameshift_variant;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2440063357353	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.173	1	83.386	82.886	83.886	1.2125								0	0	0	0.42693	1	34497	34497		0.23584	0	1				11677	4674	5841	5866	14184	14184					0.1847800049313264
IRRAAVKIL	9	Unmodified	_IRRAAVKIL_					0	0	0		ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;SCN5A|p.L1157Sfs*58|1|0.3|ENSG00000183873|chr3:38576703-38576703|G/-|frameshift_variant;SCN5A|p.Q1483Pfs*49|1|0.1|ENSG00000183873|chr3:38555752-38555753|-/C|frameshift_variant;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2435485720634	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.297	1	83.509	83.009	84.009	1.2125								0	0	0	0.42693	1	34548	34548		0.23584	0	1				11678	4674	5841	5866	14185	14185					0.1847800049313264
IRRAAVKIL	9	Unmodified	_IRRAAVKIL_					0	0	0		ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;SCN5A|p.L1157Sfs*58|1|0.3|ENSG00000183873|chr3:38576703-38576703|G/-|frameshift_variant;SCN5A|p.Q1483Pfs*49|1|0.1|ENSG00000183873|chr3:38555752-38555753|-/C|frameshift_variant;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2437621951103	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.109	1	82.805	82.305	83.305	1.6959								0	0	0	0.42693	1	34027	34027		0.23584	0	1				11679	4674	5841	5866	14186	14186					0.1847800049313264
IRRAAVKIL	9	Unmodified	_IRRAAVKIL_					0	0	0		ENST00000476683.1_1_3:38671674-38674684:-|nuORF;ENST00000491944.1_1_3:38656036-38674834:-|nuORF;SCN5A|p.L1157Sfs*58|1|0.3|ENSG00000183873|chr3:38576703-38576703|G/-|frameshift_variant;SCN5A|p.Q1483Pfs*49|1|0.1|ENSG00000183873|chr3:38555752-38555753|-/C|frameshift_variant;nc|ENSG00000183873|Q14524-5|SCN5A;nc|ENSG00000183873|Q14524-3|SCN5A;nc|ENSG00000183873|Q14524-6|SCN5A;ENSG00000183873|ENST00000423572|SCN5A;nc|ENSG00000183873|Q14524|SCN5A;nc|ENSG00000183873|Q14524-4|SCN5A	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	ENST00000476683.1_1_3:38671674-38674684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2444335818291	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.254	1	83.924	83.424	84.424	1.67								0	0	0	0.42693	1	34506	34506		0.23584	0	1				11680	4674	5841	5866	14187	14187					0.1847800049313264
IRRHRITLPP	10	Unmodified	_IRRHRITLPP_					0	0	0		ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8964721560478	2	629.89638	1257.77821	2.8905	0.0018207	-2.0852	-0.0013135	0.80523	0.00050721	629.8949990451944	107.37	0.26463	107.53	107.36	107.62	0.15781					38	13	4	0	0	0	0.88314	1	46167	46167		3.2813	0	1	129150000			11681	4659	5842	5867	14188	14188					0.15962977673393652
IRRHRITLPP	10	Unmodified	_IRRHRITLPP_					0	0	0		ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	629.89638	1257.77821	2.7441	0.0017285	-1.2746	-0.00080284	1.4696	0.00092568	629.8957885499747	107.36	0.26962	107.52	107.33	107.6	0.15796	0.031253	0.00042286	NaN	3.2813	35	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72146000			11682	4659	5842	5867							0.15962977673393652
IRRRSKRRPPK	11	Unmodified	_IRRRSKRRPPK_					0	0	0			REV__nc|ENSG00000152270|Q13370-2|PDE3B	REV__nc|ENSG00000152270|Q13370-2|PDE3B	MSMS	GG20161007_CRH_Patient100_W632_02	4	725.4716064333916	2	725.471109	1448.92767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.289	1	33.114	32.614	33.614	1.8246								0	0	0	0.63775	1	13117	13117		1.1933	0.88631	1		+		11683	10419	5843	5868	14189	14189					0.2211592301600831
IRRVLIRPRR	10	Unmodified	_IRRVLIRPRR_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4787475466728	4	334.479649	1333.88949	0.12229	4.0905E-05	-3.0316	-0.001014	-2.9093	-0.0009731	334.4789065153543	24.857	2.539	26.098	25.331	27.871	1.241					289	82	6	0	0	0	0.89803	1	10667	10667		0.15932	0	1	178320000	+		11684	14216	5844	5869	14190	14190					0.2359003710134857
IRRVLIRPRR	10	Unmodified	_IRRVLIRPRR_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4798156619072	4	334.479649	1333.88949	-0.021052	-7.0415E-06	-1.4044	-0.00046976	-1.4255	-0.0004768	334.48055263633654	22.564	1.9819	24.214	23.552	25.533	1.6498					317	64	7	0	0	0	0.89803	1	9249	9249		0.15932	0	1	559120000	+		11685	14216	5844	5869	14191	14191					0.2359003710134857
IRSQDVHIKAV	11	Unmodified	_IRSQDVHIKAV_					0	0	0		ENSG00000171587|ENST00000400454|DSCAM;nc|ENSG00000171587|O60469-2|DSCAM	ENSG00000171587|ENST00000400454|DSCAM	ENSG00000171587|ENST00000400454|DSCAM	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	421.7704955935478	3	422.582333	1264.72517	2.7021	0.0011419	-0.86753	-0.0003666	1.8346	0.00077526	422.58200904468924	80.602	1.6577	81.842	81.098	82.756	1.2399					66	53	2	0	0	0	0.14606	1	33756	33756		0.36667	0.22678	1	1097200			11686	4198	5845	5870	14192	14192					0.1033955510006308
IRWLLVSGP	9	Unmodified	_IRWLLVSGP_					0	0	0			REV__nc|ENSG00000141447|Q9BXW6-2|OSBPL1A	REV__nc|ENSG00000141447|Q9BXW6-2|OSBPL1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5472900271416	3	347.54656	1039.61785	1.0713	0.00037233	0.17828	6.1961E-05	1.2496	0.00043429	347.54658677751496	40.593	0.46365	41.904	41.637	42.1	1.3102					36	14	3	0	0	0	0.77025	1	17015	17015		4.5289	0	1	3595000	+		11687	10147	5846	5871	14193	14193					0.09962629956521596
IRYESLTDPSK	11	Unmodified	_IRYESLTDPSK_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant;ENST00000507090.2_1_4:13338255-13338456:+|nuORF;nc|ENSG00000282100|Q58FF6|HSP90AB4P;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.9019653201103	3	436.897987	1307.67213	1.0034	0.00043838	3.0002	0.0013108	4.0036	0.0017491	436.90030155187674	19.904	0.28473	20.962	20.794	21.079	1.0585					17	8	3	0	0	0	0.91964	1	8288	8288		8.6273	5.2716	1	487580			11688	1194;1010;7944	5847	5872	14194	14194					0.03060132526752568
IRYESLTDPSK	11	Unmodified	_IRYESLTDPSK_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant;ENST00000507090.2_1_4:13338255-13338456:+|nuORF;nc|ENSG00000282100|Q58FF6|HSP90AB4P;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.8994018435478	3	436.897987	1307.67213	0.47485	0.00020746	4.1431	0.0018101	4.6179	0.0020176	436.90059514602825	19.347	0.22763	20.87	20.753	20.981	1.5237					12	7	2	0	0	0	0.6804	1	8029	8029		18.853	13.45	1	422480			11689	1194;1010;7944	5847	5872	14195	14195					0.03060132526752568
IRYHNKAKIL	10	Unmodified	_IRYHNKAKIL_					0	0	0		tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3862182497978	2	628.385314	1254.75608	1.6819	0.0010569	-2.6815	-0.001685	-0.99959	-0.00062813	628.3839104524359	78.736	0.52486	80.471	80.289	80.814	1.735					41	16	3	0	0	0	0.846	1	32988	32988		7.2892	1.5574	1	2272800			11690	16672	5848	5873	14196	14196					0.13888753204969362
IRYHNKAKIL	10	Unmodified	_IRYHNKAKIL_					0	0	0		tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	628.385314	1254.75608	2.5225	0.0015851	-2.3616	-0.001484	0.16091	0.00010111	628.3836269646986	79.065	0.49911	80.332	80.224	80.723	1.2668	-0.069501	0.00022163	NaN	7.2892	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1897500			11691	16672	5848	5873							0.13888753204969362
ISAEALVLV	9	Unmodified	_ISAEALVLV_					0	0	0		ENSG00000213445|ENST00000534313|SIPA1	ENSG00000213445|ENST00000534313|SIPA1	ENSG00000213445|ENST00000534313|SIPA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.5577880740166	1	914.55571	913.548434	2.6034	0.0023809	-0.84098	-0.00076912	1.7624	0.0016118	914.5551754244383	72.527	0.37536	74.337	74.137	74.512	1.8101					27	11	3	0	0	0	0.051699	1	30447	30447		67.344	6.9543	1	5539500			11692	5218	5849	5874	14197	14197					0.08820126217096913
ISAFEKNVI	9	Unmodified	_ISAFEKNVI_					0	0	0			REV__ATR|p.K704N|1|0.18|ENSG00000175054|chr3:142556106-142556106|C/G|missense_variant	REV__ATR|p.K704N|1|0.18|ENSG00000175054|chr3:142556106-142556106|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2894470095634	2	510.78985	1019.56515	2.0964	0.0010708	-3.5377	-0.001807	-1.4413	-0.0007362	511.2883352540616	49.149	0.68213	51.126	50.73	51.412	1.9772					47	21	3	0	0	0	0.5697	1	20477	20477		12.532	0	1	4078800	+		11693	8153	5850	5875	14198	14198					0.056146271030456774
ISALKTKKC	9	Unmodified	_ISALKTKKC_					0	0	0		ENST00000490918.5_1_6:3138827-3138989:+|nuORF	ENST00000490918.5_1_6:3138827-3138989:+|nuORF	ENST00000490918.5_1_6:3138827-3138989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3056213259697	2	496.30207	990.589587	1.424	0.00070674	3.1452	0.001561	4.5692	0.0022677	496.30394401833115	66.464	0.70751	66.464	65.87	66.577	0					25	21	2	0	0	0	0.72823	1	27632	27632		6.2058	0.97511	1	797300			11694	6906	5851	5876	14199	14199					0.093915639849115
ISALKTKKC	9	Unmodified	_ISALKTKKC_					0	0	0		ENST00000490918.5_1_6:3138827-3138989:+|nuORF	ENST00000490918.5_1_6:3138827-3138989:+|nuORF	ENST00000490918.5_1_6:3138827-3138989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3040649294853	2	496.30207	990.589587	2.5655	0.0012732	2.6029	0.0012918	5.1684	0.0025651	496.3035523793445	65.99	0.38004	66.314	66.052	66.432	0.32449					19	11	2	0	0	0	0.6486	2	27574	27574;27630		9.3831	4.1525	1	633060			11695	6906	5851	5876	14200;14201	14200					0.093915639849115
ISAPLVKTL	9	Unmodified	_ISAPLVKTL_					0	0	0		ENST00000468979.1_1_20:3782308-3783795:+|nuORF;ENST00000480816.5_1_20:3781734-3783795:+|nuORF;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	ENST00000468979.1_1_20:3782308-3783795:+|nuORF	ENST00000468979.1_1_20:3782308-3783795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3060180544853	2	471.305136	940.595718	2.4938	0.0011753	0.71766	0.00033824	3.2115	0.0015136	471.30515621084237	41.059	0.34584	42.384	42.21	42.556	1.3254					24	10	3	0	0	0	0.0080484	2	17214	17214;17268		110.55	27.124	1	2173200			11696	1332	5852	5877	14202;14203	14202					0.12304405488100656
ISAPLVKTL	9	Unmodified	_ISAPLVKTL_					0	0	0		ENST00000468979.1_1_20:3782308-3783795:+|nuORF;ENST00000480816.5_1_20:3781734-3783795:+|nuORF;nc|ENSG00000101224|P30305-3|CDC25B;nc|ENSG00000101224|P30305-2|CDC25B;ENSG00000101224|ENST00000245960|CDC25B;nc|ENSG00000101224|P30305-4|CDC25B	ENST00000468979.1_1_20:3782308-3783795:+|nuORF	ENST00000468979.1_1_20:3782308-3783795:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3060180544853	2	471.305136	940.595718	2.4792	0.0011685	-0.77451	-0.00036503	1.7047	0.00080345	471.3046213208427	40.676	0.3148	42.544	42.333	42.648	1.8681					20	9	3	0	0	0	0.039278	2	17027	17027;17082		76.825	6.4928	1	2270600			11697	1332	5852	5877	14204;14205	14204					0.12304405488100656
ISATGETFY	9	Unmodified	_ISATGETFY_					0	0	0			REV__tr|A0A7D7AEM3|A0A7D7AEM3_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03080PE=4SV=1	REV__tr|A0A7D7AEM3|A0A7D7AEM3_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	988.4721557497978	1	988.462204	987.454927	4.6724	0.0046185	4.134	0.0040863	8.8063	0.0087047	988.4659421275014	74.294	0.39098	75.612	75.438	75.829	1.318					34	12	3	0	0	0	0.24063	1	31143	31143		28.487	3.0875	1	4918800	+		11698	15913	5853	5878	14206	14206					-0.039302179559967954
ISAVGRDEVP	10	Unmodified	_ISAVGRDEVP_					0	0	0		ENST00000535981.1_1_11:64071127-64072115:+|nuORF	ENST00000535981.1_1_11:64071127-64072115:+|nuORF	ENST00000535981.1_1_11:64071127-64072115:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7823974490166	2	521.780013	1041.54547	3.3953	0.0017716	0.94996	0.00049567	4.3453	0.0022673	521.780506879469	74.581	0.54096	75.887	75.549	76.09	1.3063					44	17	3	0	0	0	0.40874	1	31344	31344		32.786	1.5173	1	14681000			11699	7201	5854	5879	14207	14207					0.026362510922808724
ISAVKWKR	8	Unmodified	_ISAVKWKR_					0	0	0		ENST00000422163.5_1_3:50264332-50264620:+|nuORF	ENST00000422163.5_1_3:50264332-50264620:+|nuORF	ENST00000422163.5_1_3:50264332-50264620:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3094970583916	2	494.308544	986.602535	3.4078	0.0016845	0.16659	8.2347E-05	3.5744	0.0017669	494.3085695227759	99.875	0.093788	99.948	99.869	99.963	0.072716					4	2	2	0	0	0	0.89008	1	41814	41814		2.5775	0	1	3627400			11700	6450	5855	5880	14208	14208					0.10869763159325885
ISAVLSIFTV	10	Unmodified	_ISAVLSIFTV_					0	0	0		tr|A0A553SRF0|A0A553SRF0_NIACIPTSbeta-glucosidetransportersubunitIIBCAOS=NialliacirculansOX=1397GN=CEQ21_00970PE=4SV=1	tr|A0A553SRF0|A0A553SRF0_NIACIPTSbeta-glucosidetransportersubunitIIBCAOS=NialliacirculansOX=1397GN=CEQ21_00970PE=4SV=1	tr|A0A553SRF0|A0A553SRF0_NIACIPTSbeta-glucosidetransportersubunitIIBCAOS=NialliacirculansOX=1397GN=CEQ21_00970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3169433474541	2	525.3157	1048.61685	2.0443	0.0010739	-0.51375	-0.00026988	1.5306	0.00080402	525.3149800805675	64.747	0.60612	64.747	64.56	65.166	0					39	18	3	0	0	0	0.47063	1	27044	27044		29.082	1.4528	1	3369800			11701	16553	5856	5881	14209	14209					0.09448370796940253
ISCTEKTER	9	Unmodified	_ISCTEKTER_					0	0	0			REV__ENST00000546869.1_1_12:113614643-113615134:-|nuORF	REV__ENST00000546869.1_1_12:113614643-113615134:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.9637939333916	2	533.763506	1065.51246	0.5487	0.00029288	-4.165	-0.0022231	-3.6163	-0.0019302	533.762097377315	17.426	0.13839	18.729	18.67	18.808	1.3023					7	4	2	0	0	0	0.10591	1	7262	7262		19.257	2.1441	1	219570	+		11702	13810	5857	5882	14210	14210					-0.017676990220707012
ISDAALLDII	10	Unmodified	_ISDAALLDII_					0	0	0		ENST00000569461.1_1_16:81045544-81053727:+|nuORF;nc|ENSG00000166451|Q96H22-2|CENPN;nc|ENSG00000166451|Q96H22-5|CENPN;nc|ENSG00000166451|Q96H22-4|CENPN;ENSG00000166451|ENST00000305850|CENPN;nc|ENSG00000166451|Q96H22-3|CENPN	ENST00000569461.1_1_16:81045544-81053727:+|nuORF	ENST00000569461.1_1_16:81045544-81053727:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.7148925662041	2	522.30279	1042.59103	2.2403	0.0011701	-1.9908	-0.0010398	0.24944	0.00013028	522.3020498035481	69.376	0.38071	70.742	70.558	70.939	1.3657					18	12	2	0	0	0	0.11852	1	29155	29155		32.305	1.6689	1	1832500			11703	3903	5858	5883	14211	14211					0.0714347655466554
ISDCDGAHAPG	11	Unmodified	_ISDCDGAHAPG_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;CDK5RAP2|p.Y1498Gfs*4|1|0.29|ENSG00000136861|chr9:120409227-120409240|TCACGCTGGCATAC/-|frameshift_variant;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.7148925662041	2	521.716556	1041.41856	1.4937	0.00077926	-2.4555	-0.0012811	-0.96186	-0.00050182	521.7147410779007	70.512	0.37071	70.834	70.647	71.017	0.32223					26	11	3	0	0	0	0.91768	1	29494	29494		8.7454	0.83525	1	1662700			11704	143	5859	5884	14212	14212					-0.10049418124344811
ISDPMLSFM	9	Unmodified	_ISDPMLSFM_					0	0	0		ENSG00000183066|ENST00000328823|WBP2NL	ENSG00000183066|ENST00000328823|WBP2NL	ENSG00000183066|ENST00000328823|WBP2NL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7440063357353	2	520.743196	1039.47184	1.5727	0.00081897	-1.417	-0.00073788	0.15573	8.1094E-05	520.742927358003	83.846	0.43923	85.033	84.767	85.207	1.1879					33	13	3	0	0	0	0.069258	2	35166	35166;35217		60.39	18.295	1	3642000			11705	4638	5860	5885	14213;14214	14213					-0.046317566660263765
ISDPMLSFM	9	Unmodified	_ISDPMLSFM_					0	0	0		ENSG00000183066|ENST00000328823|WBP2NL	ENSG00000183066|ENST00000328823|WBP2NL	ENSG00000183066|ENST00000328823|WBP2NL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7437621951103	2	520.743196	1039.47184	1.8106	0.00094286	-1.2645	-0.00065848	0.54612	0.00028439	520.7430252908471	83.346	0.40933	84.984	84.758	85.167	1.6379					26	12	3	0	0	0	0.1735	1	34932	34932		36.044	7.5574	1	1409500			11706	4638	5860	5885	14215	14215					-0.046317566660263765
ISDVAFLVV	9	Unmodified	_ISDVAFLVV_					0	0	0		ENST00000490732.5_1_1:101477199-101487300:-|nuORF;ENST00000488789.5_1_1:101460696-101487300:-|nuORF;ENST00000477293.5_1_1:101467067-101490999:-|nuORF;ENST00000476507.1_1_1:101479229-101490999:-|nuORF;ENST00000481871.5_1_1:101455997-101490867:-|nuORF;nc|ENSG00000117543|Q9H2P9-3|DPH5;nc|ENSG00000117543|Q9H2P9-2|DPH5;nc|ENSG00000117543|Q9H2P9-6|DPH5;nc|ENSG00000117543|Q9H2P9-4|DPH5;ENSG00000117543|ENST00000370109|DPH5;nc|ENSG00000117543|Q9H2P9-5|DPH5	ENST00000490732.5_1_1:101477199-101487300:-|nuORF	ENST00000490732.5_1_1:101477199-101487300:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	962.5563232302666	1	962.55571	961.548434	1.8156	0.0017476	-1.8123	-0.0017444	0.0033398	3.2147E-06	962.5539012473748	79.686	0.1908	79.987	79.813	80.004	0.30047					8	5	2	0	0	0	0.27148	1	33313	33313		26.884	0	1	283500			11707	2015	5861	5886	14216	14216					0.06612126217100922
ISDVAFLVV	9	Unmodified	_ISDVAFLVV_					0	0	0		ENST00000490732.5_1_1:101477199-101487300:-|nuORF;ENST00000488789.5_1_1:101460696-101487300:-|nuORF;ENST00000477293.5_1_1:101467067-101490999:-|nuORF;ENST00000476507.1_1_1:101479229-101490999:-|nuORF;ENST00000481871.5_1_1:101455997-101490867:-|nuORF;nc|ENSG00000117543|Q9H2P9-3|DPH5;nc|ENSG00000117543|Q9H2P9-2|DPH5;nc|ENSG00000117543|Q9H2P9-6|DPH5;nc|ENSG00000117543|Q9H2P9-4|DPH5;ENSG00000117543|ENST00000370109|DPH5;nc|ENSG00000117543|Q9H2P9-5|DPH5	ENST00000490732.5_1_1:101477199-101487300:-|nuORF	ENST00000490732.5_1_1:101477199-101487300:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	962.55571	961.548434	2.1107	0.0020316	2.0639	0.0019866	4.1746	0.0040182	962.558318060217	78.66	0.27877	79.926	79.755	80.034	1.2668	-0.030188	0.0017445	NaN	26.884	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534970			11708	2015	5861	5886							0.06612126217100922
ISEEKVAEK	9	Unmodified	_ISEEKVAEK_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7839233279228	2	516.782222	1031.54989	0.88647	0.00045811	0.28495	0.00014726	1.1714	0.00060537	516.7823645846651	16.071	0.44028	16.071	15.932	16.373	0					34	13	3	0	0	0	0.39927	1	6655	6655		20.454	1.1966	1	2247100	+		11709	11743	5862	5887	14217	14217					0.03537715515176387
ISELPHRGV	9	Unmodified	_ISELPHRGV_					0	0	0			REV__tr|A0A553SJA5|A0A553SJA5_NIACIPyruvatekinaseOS=NialliacirculansOX=1397GN=pykPE=3SV=1	REV__tr|A0A553SJA5|A0A553SJA5_NIACIPyruvatekinaseOS=NialliacirculansOX=1397GN=pykPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7857849001884	2	504.285266	1006.55598	2.8237	0.001424	-1.5848	-0.0007992	1.2389	0.00062477	504.7860840901569	62.466	0.3725	64.415	64.229	64.601	1.9492					36	11	4	0	0	0	0.27148	1	26249	26249		26.884	3.7352	1	3827300	+		11710	14894	5863	5888	14218	14218					0.0529627853737793
ISELRQQKF	9	Unmodified	_ISELRQQKF_					0	0	0		nc|ENSG00000122966|O14578-3|CIT;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578|CIT;ENSG00000122966|ENST00000392521|CIT	nc|ENSG00000122966|O14578-3|CIT	nc|ENSG00000122966|O14578-3|CIT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8256103396416	2	574.824755	1147.63496	1.2739	0.00073229	1.2883	0.00074054	2.5622	0.0014728	574.8255647970898	38.757	0.25677	40.594	40.398	40.654	1.8366					12	7	2	0	0	0	0.68551	1	16230	16230		7.9102	0	1	499990			11711	2175	5864	5889	14219	14219					0.0670450577167685
ISELRQQKF	9	Unmodified	_ISELRQQKF_					0	0	0		nc|ENSG00000122966|O14578-3|CIT;ENST00000545913.5_1_12:120126039-120222037:-|nuORF;ENST00000537607.5_1_12:120126039-120222037:-|nuORF;nc|ENSG00000122966|O14578|CIT;ENSG00000122966|ENST00000392521|CIT	nc|ENSG00000122966|O14578-3|CIT	nc|ENSG00000122966|O14578-3|CIT	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	574.824755	1147.63496	2.27	0.0013049	-0.034721	-1.9959E-05	2.2353	0.0012849	574.8247931491288	39.28	0.25746	40.576	40.443	40.701	1.2961	-0.0087417	-0.0012356	NaN	7.9102	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842900			11712	2175	5864	5889							0.0670450577167685
ISERTKNAI	9	Unmodified	_ISERTKNAI_					0	0	0		tr|A0A7D7ADE8|A0A7D7ADE8_9CLOTSugar-phosphataseOS=ClostridiumintestinaleOX=36845GN=yidAPE=4SV=1	tr|A0A7D7ADE8|A0A7D7ADE8_9CLOTSugar-phosphataseOS=ClostridiumintestinaleOX=36845GN=yidAPE=4SV=1	tr|A0A7D7ADE8|A0A7D7ADE8_9CLOTSugar-phosphataseOS=ClostridiumintestinaleOX=36845GN=yidAPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.2590209841728	2	516.29583	1030.57711	2.3622	0.0012196	2.5175	0.0012998	4.8797	0.0025194	516.297278064866	43.741	0.18758	45.685	45.546	45.734	1.9438					7	5	2	0	0	0	0.11275	1	18346	18346		10.074	3.7198	1	255780			11713	17323	5865	5890	14220	14220					0.06304243846216195
ISETKIMKK	9	Unmodified	_ISETKIMKK_					0	0	0		nc|ENSG00000114487|Q86VD1-2|MORC1;ENSG00000114487|ENST00000232603|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	539.7940551638603	2	539.32046	1076.62637	2.9169	0.0015731	0.6532	0.00035228	3.5701	0.0019254	539.32029669855	63.219	0.50121	64.632	64.314	64.816	1.4134					37	15	4	0	0	0	0.097511	1	26589	26589		16.942	6.1184	1	1952100			11714	1867	5866	5891	14221	14221					0.0911181581082019
ISFFYFTL	8	Unmodified	_ISFFYFTL_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1401244997978	2	519.270761	1036.52697	2.2423	0.0011644	1.2969	0.00067346	3.5392	0.0018378	519.271819543534	48.222	0.34522	48.222	48.028	48.373	0					26	10	4	0	0	0	2.3239	1	20186	20186		14.582	2.0501	1	1253400			11715	7606	5867	5892	14222	14222					0.010167411883685418
ISFFYFTL	8	Unmodified	_ISFFYFTL_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1400634646416	2	519.270761	1036.52697	1.9086	0.00099108	2.4228	0.0012581	4.3314	0.0022492	519.2720381480076	47.786	0.33068	48.117	47.928	48.259	0.33034					26	10	3	0	0	0	2.3239	1	20076	20076		14.582	2.0501	1	2085400			11716	7606	5867	5892	14223	14223					0.010167411883685418
ISFFYFTL	8	Unmodified	_ISFFYFTL_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|137|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1398193240166	2	519.270761	1036.52697	1.5459	0.00080276	4.1982	0.00218	5.7441	0.0029828	519.7752391932854	46.267	0.12699	48.237	48.156	48.283	1.9703					6	3	2	0	0	0	2.3239	1	19393	19393		5.2307	0.90143	1	312580			11717	7606	5867	5892	14224	14224					0.010167411883685418
ISFFYVLYI	9	Unmodified	_ISFFYVLYI_					0	0	0			REV__ENST00000497048.5_1_9:110247318-110247534:-|nuORF	REV__ENST00000497048.5_1_9:110247318-110247534:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8204833865166	2	582.820618	1163.62668	1.6529	0.00096337	-3.0367	-0.0017698	-1.3837	-0.00080646	582.8186211561602	68.619	0.50322	68.619	68.421	68.924	0					31	15	3	0	0	0	0.66839	1	28652	28652		8.5933	1.304	1	1685000	+		11718	13474	5868	5893	14225	14225					0.0514155880234739
ISFHMKRNQNL	11	Unmodified	_ISFHMKRNQNL_					0	0	0		nc|ENSG00000070601|Q5SYB0-2|FRMPD1;nc|ENSG00000070601|Q5SYB0-3|FRMPD1;ENSG00000070601|ENST00000377765|FRMPD1	nc|ENSG00000070601|Q5SYB0-2|FRMPD1	nc|ENSG00000070601|Q5SYB0-2|FRMPD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3673583865166	2	694.366795	1386.71904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.04	1	86.636	86.136	87.136	1.5962								0	0	0	0.63769	1	35690	35690		13.042	3.6593	1				11719	856	5869	5894	14226	14226					0.04114713596936781
ISFKPTHSRFQ	11	Unmodified	_ISFKPTHSRFQ_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-2|FAT4	REV__nc|ENSG00000196159|Q6V0I7-2|FAT4	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.9127685427666	3	449.910449	1346.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.21576	1	0.21576	-0.28424	0.71576	0								0	0	0	0.63775	1	88	88		0.40827	0.24894	1		+		11720	11619	5870	5895	14227	14227					0.05003268583004683
ISFNYLVVA	9	Unmodified	_ISFNYLVVA_					0	0	0			REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1025.570605456829	1	1025.56661	1024.55933	2.5418	0.0026068	1.4607	0.001498	4.0025	0.0041048	1025.568111967448	88.127	0.33656	88.127	87.967	88.304	0					21	10	3	0	0	0	0.22154	1	36847	36847		30.637	3.7529	1	1474600	+		11721	15217	5871	5896	14228	14228					0.04803528591378381
ISFNYLVVA	9	Unmodified	_ISFNYLVVA_					0	0	0			REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2863036990166	2	513.286943	1024.55933	4.0542	0.002081	-2.9996	-0.0015397	1.0546	0.00054133	513.2850079976487	86.828	0.34948	87.92	87.74	88.09	1.0918					20	12	2	0	0	0	0.37357	1	36578	36578		21.747	0	1	3196200	+		11722	15217	5871	5896	14229	14229					0.04803528591378381
ISFNYLVVA	9	Unmodified	_ISFNYLVVA_					0	0	0			REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	513.286943	1024.55933	2.7488	0.0014109	-0.092901	-4.7685E-05	2.6559	0.0013633	513.286157886702	87.667	0.27608	87.902	87.793	88.069	0.23471	-0.06547	0.0012584	NaN	21.747	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1106600	+		11723	15217	5871	5896							0.04803528591378381
ISFNYLVVA	9	Unmodified	_ISFNYLVVA_					0	0	0			REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	REV__tr|A0A553SSV1|A0A553SSV1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03735PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	513.286943	1024.55933	4.0542	0.002081	-2.9996	-0.0015397	1.0546	0.00054133	513.2850079976487	86.828	0.34948	87.92	87.74	88.09	1.0918	-0.047302	-0.0017256	NaN	21.747	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3196200	+		11724	15217	5871	5896							0.04803528591378381
ISFNYRVK	8	Unmodified	_ISFNYRVK_					0	0	0		tr|A0A7D6W2H0|A0A7D6W2H0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06250PE=4SV=1	tr|A0A7D6W2H0|A0A7D6W2H0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06250PE=4SV=1	tr|A0A7D6W2H0|A0A7D6W2H0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06250PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8630859255791	3	342.862548	1025.56581	-0.24254	-8.3159E-05	2.2891	0.00078483	2.0465	0.00070168	342.8632624806747	28.334	0.48612	29.613	29.335	29.821	1.2789					46	15	4	0	0	0	0.88896	1	11927	11927		3.2813	0.54611	1	6203400			11725	17032	5872	5897	14230	14230					0.05405466542742943
ISFPAPLYI	9	Unmodified	_ISFPAPLYI_					0	0	0		ENSG00000255154|ENST00000461393|HTD2	ENSG00000255154|ENST00000461393|HTD2	ENSG00000255154|ENST00000461393|HTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7949401736259	2	510.791861	1019.56917	5.4327	0.002775	0.90389	0.0004617	6.3366	0.0032367	510.7919960383775	87.929	0.3173	88.986	88.827	89.144	1.0562					15	9	2	0	0	0	0.68551	1	37111	37111		7.9102	2.1497	1	760370			11726	5399	5873	5898	14231	14231					0.060167165967413894
ISFVPISIN	9	Unmodified	_ISFVPISIN_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2922851443291	2	495.286943	988.559333	1.6229	0.00080382	2.2007	0.00109	3.8236	0.0018938	495.2882129550225	54.728	0.45373	56.133	55.931	56.385	1.4048					37	14	3	0	0	0	0.20244	1	22865	22865		32.786	2.1491	1	6387600	+		11727	8555	5874	5899	14232	14232					0.06459528591381059
ISFYLRRLLRQ	11	Unmodified	_ISFYLRRLLRQ_					0	0	0		tr|A0A7D6ZZY0|A0A7D6ZZY0_9CLOTDUF445domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21985PE=3SV=1	tr|A0A7D6ZZY0|A0A7D6ZZY0_9CLOTDUF445domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21985PE=3SV=1	tr|A0A7D6ZZY0|A0A7D6ZZY0_9CLOTDUF445domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21985PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	732.9441406130791	2	732.943528	1463.8725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.81	1	119.98	119.48	120.48	0.16584								0	0	0	0.63775	1	51683	51683		1.3295	0	1				11728	17215	5875	5900	14233	14233					0.159120717048836
ISGFYGDPT	9	Unmodified	_ISGFYGDPT_					0	0	0		ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;nc|ENSG00000088812|O75882-3|ATRN	ENSG00000088812|ENST00000262919|ATRN	ENSG00000088812|ENST00000262919|ATRN	MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7214233279228	2	478.721633	955.428712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.563	1	80.853	80.353	81.353	0.29056								0	0	0	0.3709	1	33679	33679		11.64	0	1				11729	1109	5876	5901	14234	14234					-0.050784871274800025
ISGIILIYRHK	11	Unmodified	_ISGIILIYRHK_					0	0	0		tr|A0A7D6VXT7|A0A7D6VXT7_9CLOTGlycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=plsYPE=3SV=1	tr|A0A7D6VXT7|A0A7D6VXT7_9CLOTGlycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=plsYPE=3SV=1	tr|A0A7D6VXT7|A0A7D6VXT7_9CLOTGlycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=plsYPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.9086791872978	2	656.908622	1311.80269	3.8226	0.0025111	0.05809	3.816E-05	3.8807	0.0025493	656.9082985671026	95.407	0.31112	95.828	95.664	95.975	0.4212					23	12	2	0	0	0	1.0365	1	40117	40117		2.9952	1.8019	1	3328500			11730	16989	5877	5902	14235	14235					0.15926193036261793
ISGLVTDVI	9	Unmodified	_ISGLVTDVI_					0	0	0		nc|ENSG00000166130|Q70UQ0-2|IKBIP;nc|ENSG00000166130|Q70UQ0|IKBIP	nc|ENSG00000166130|Q70UQ0-2|IKBIP	nc|ENSG00000166130|Q70UQ0-2|IKBIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.5419799685478	1	916.534975	915.527698	3.9982	0.0036645	-0.2355	-0.00021585	3.7627	0.0034486	916.5351184426917	93.143	0.35978	94.015	93.834	94.194	0.87176					16	10	2	0	0	0	0.09539	1	39225	39225		50.855	0	1	2275300			11731	7916	5878	5903	14236	14236					0.06655535837421667
ISGRECCNL	9	Unmodified	_ISGRECCNL_					0	0	0		tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	tr|A0A7D7A4R9|A0A7D7A4R9_9CLOTFamily65glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02960PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7247802615166	2	497.725869	993.437185	1.5446	0.00076878	-1.4897	-0.00074145	0.054921	2.7336E-05	497.7251212035577	65.757	0.38743	65.757	65.482	65.87	0					38	11	4	0	0	0	0.61249	1	27430	27430		10.824	2.2306	1	3786800			11732	17289	5879	5904	14237	14237					-0.0597957975414829
ISGRTRNQT	9	Unmodified	_ISGRTRNQT_					0	0	0		nc|ENSG00000146373|Q8TC41-2|RNF217	nc|ENSG00000146373|Q8TC41-2|RNF217	nc|ENSG00000146373|Q8TC41-2|RNF217	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7824584841728	2	516.780879	1031.5472	0.41161	0.00021271	2.1435	0.0011077	2.5551	0.0013204	516.7818994249119	15.309	0.44215	16.205	15.96	16.402	0.89664					48	16	4	0	0	0	0.10294	1	6424	6424		48.346	4.4876	1	4545600			11733	7890	5880	5905	14238	14238					0.03269304900891257
ISGSPEIKV	9	Unmodified	_ISGSPEIKV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2716857790947	2	465.26875	928.522947	2.1755	0.0010122	2.9293	0.0013629	5.1048	0.0023751	465.27040313595325	93.935	0.40944	93.935	93.709	94.119	0					31	12	3	0	0	0	0.71526	1	39266	39266		6.7232	0.96273	1	2219800			11734	3425;7900	5881	5906	14239	14239					0.05582651694669494
ISGSPEIKV	9	Unmodified	_ISGSPEIKV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2720825076103	2	465.26875	928.522947	4.3668	0.0020317	1.5796	0.00073495	5.9464	0.0027667	465.2698773902941	92.134	0.41479	93.071	92.861	93.276	0.93623					31	12	3	0	0	0	0.61249	1	38832	38832		10.824	0	1	1384800			11735	3425;7900	5881	5906	14240	14240					0.05582651694669494
ISGSPEIKV	9	Unmodified	_ISGSPEIKV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	465.26875	928.522947	3.3582	0.0015625	2.0655	0.00096104	5.4237	0.0025235	465.2700872182118	93.589	0.38578	93.734	93.524	93.91	0.14493	-0.16682	-0.00073436	NaN	6.7232	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1833700			11736	3425;7900	5881	5906							0.05582651694669494
ISGVIPESTV	10	Unmodified	_ISGVIPESTV_					0	0	0			REV__ENSG00000116147|ENST00000367674|TNR	REV__ENSG00000116147|ENST00000367674|TNR	MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2806579470634	2	501.279315	1000.54408	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.217	1	63.547	63.047	64.047	0.32974								0	0	0	0.65836	1	26485	26485		6.7232	1.4925	1		+		11737	9468	5882	5907	14241	14241					0.043826170035458745
ISHGNIPWI	9	Unmodified	_ISHGNIPWI_					0	0	0		tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1410400271416	2	518.782359	1035.55016	3.3603	0.0017433	-0.19484	-0.00010108	3.1655	0.0016422	518.7823862698542	93.254	0.19015	94.531	94.42	94.61	1.277					7	5	2	0	0	0	0.11645	1	39261	39261		8.5933	0	1	160190			11738	16515	5883	5908	14242	14242					0.03381180025712638
ISHHQTQKMNK	11	Unmodified	_ISHHQTQKMNK_					0	0	0		ENST00000579526.5_1_17:29062080-29093580:+|nuORF	ENST00000579526.5_1_17:29062080-29093580:+|nuORF	ENST00000579526.5_1_17:29062080-29093580:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2338744997978	3	451.234827	1350.68265	0.42746	0.00019288	-1.9622	-0.00088544	-1.5348	-0.00069255	451.23388742435446	12.823	0.46042	12.823	12.53	12.99	0					38	14	4	0	0	0	0.8881	1	5279	5279		10.527	0.76322	1	7036100			11739	7429	5884	5909	14243	14243					0.021338367002044833
ISHWRTHTGEK	11	Unmodified	_ISHWRTHTGEK_					0	0	0		ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2340881228447	3	451.233704	1350.67928	0.42746	0.00019288	0.52782	0.00023817	0.95528	0.00043106	451.23388742435446	12.823	0.46042	12.823	12.53	12.99	0					38	14	4	0	0	0	0.5355	1	5327	5327		23.016	0	1	7036100			11740	5038	5885	5910	14244	14244					0.017969099178117176
ISHWRTHTGEK	11	Unmodified	_ISHWRTHTGEK_					0	0	0		ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2336303591728	3	451.233704	1350.67928	-0.0063558	-2.868E-06	-0.10796	-4.8716E-05	-0.11432	-5.1583E-05	451.233680069082	12.333	0.34713	13.027	12.759	13.106	0.69396					16	10	2	0	0	0	0.87918	1	5132	5132		11.065	0.75005	1	1010500			11741	5038	5885	5910	14245	14245					0.017969099178117176
ISHWRTHTGEK	11	Unmodified	_ISHWRTHTGEK_					0	0	0		ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	ENSG00000198040|ENST00000539354|ZNF84	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	451.233704	1350.67928	0.74223	0.00033492	0.081755	3.6891E-05	0.82399	0.00037181	451.233566762215	12.691	0.34232	12.781	12.522	12.865	0.089381	-0.11308	0.00012378	NaN	23.016	24	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1683200			11742	5038	5885	5910							0.017969099178117176
ISIERETGMN	10	Unmodified	_ISIERETGMN_					0	0	0		tr|A0A553SH55|A0A553SH55_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacAPE=3SV=1	tr|A0A553SH55|A0A553SH55_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacAPE=3SV=1	tr|A0A553SH55|A0A553SH55_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.2822753787041	2	575.282063	1148.54957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.723	1	61.052	60.552	61.552	0.32809								0	0	0	0.66052	1	25443	25443		3.5965	0	1				11743	16136	5886	5911	14246	14246					-0.018760274762826157
ISIFNSTSV	9	Unmodified	_ISIFNSTSV_					0	0	0		ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2585327029228	2	484.258382	966.502212	2.5654	0.0012423	1.7075	0.00082685	4.2729	0.0020692	484.25691936128015	59.845	0.63834	61.265	60.958	61.597	1.4196					61	20	5	0	0	0	0.086433	2	25022	25022;25067		53.833	0	1	13419000			11744	5687	5887	5912	14247;14248	14247					0.017620613150029385
ISIFNSTSV	9	Unmodified	_ISIFNSTSV_					0	0	0		ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2581359744072	2	484.258382	966.502212	2.5843	0.0012515	1.8486	0.0008952	4.4329	0.0021467	484.2568676067168	59.336	0.54473	61.305	61.067	61.612	1.969					46	17	4	0	0	0	0.086433	2	24896	24845;24896		53.833	0	1	14177000			11745	5687	5887	5912	14249;14250	14250					0.017620613150029385
ISIFNSTSV	9	Unmodified	_ISIFNSTSV_					0	0	0		ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	ENST00000274242.9_2_5:40830383-40830557:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	484.258382	966.502212	2.2639	0.0010963	-3.0452	-0.0014747	-0.78127	-0.00037834	484.2569033256404	61.374	0.31676	61.374	61.203	61.52	0	0.059708	-0.0012484	NaN	53.833	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1735900			11746	5687	5887	5912							0.017620613150029385
ISIFVLPMV	9	Unmodified	_ISIFVLPMV_					0	0	0			REV__tr|A0A553SPU2|A0A553SPU2_NIACIL-cystineuptakeproteinTcyPOS=NialliacirculansOX=1397GN=CEQ21_09270PE=3SV=1	REV__tr|A0A553SPU2|A0A553SPU2_NIACIL-cystineuptakeproteinTcyPOS=NialliacirculansOX=1397GN=CEQ21_09270PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8058654665947	2	509.803914	1017.59328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.157	1	69.535	69.035	70.035	1.3778								0	0	0	0.40188	1	28598	28598		8.5933	0	1		+		11747	15106	5888	5913	14251	14251					0.08518233758786664
ISIGICTYSV	10	Unmodified	_ISIGICTYSV_					0	0	0			REV__nc|ENSG00000186268|Q8NGN7|OR10D4P	REV__nc|ENSG00000186268|Q8NGN7|OR10D4P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.3294555544853	2	528.275718	1054.53688	1.4158	0.00074795	1.6605	0.00087719	3.0763	0.0016251	528.2757333031944	67.019	0.28258	68.908	68.704	68.986	1.8889					14	8	3	0	0	0	0.12425	1	28069	28069		19.257	0	1	1273800	+		11748	14510	5889	5914	14252	14252					0.011795611314482812
ISIIYYGLKG	10	Unmodified	_ISIIYYGLKG_					0	0	0			REV__ENST00000553115.1_1_12:55516583-55517273:-|nuORF	REV__ENST00000553115.1_1_12:55516583-55517273:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1126.655688464642	1	1126.65067	1125.6434	1.353	0.0015244	1.9575	0.0022054	3.3105	0.0037298	1126.653010260307	101.22	0.19714	101.22	101.12	101.32	0					18	6	4	0	0	0	0.82019	1	42372	42372		10.074	0.6908	1	80858000	+		11749	13842	5890	5915	14253	14253					0.0856005968826139
ISIKILMII	9	Unmodified	_ISIKILMII_					0	0	0		tr|A0A553SF95|A0A553SF95_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08455PE=3SV=1	tr|A0A553SF95|A0A553SF95_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08455PE=3SV=1	tr|A0A553SF95|A0A553SF95_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08455PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3495971560478	2	522.348489	1042.68242	2.6475	0.0013829	-1.4505	-0.00075766	1.197	0.00062525	522.3485000674677	76.404	0.3382	77.698	77.519	77.857	1.2938					23	10	3	0	0	0	0.28372	1	32093	32093		26.268	1.5943	1	1602500			11750	16046	5891	5916	14254	14254					0.16279068718290546
ISIMKWRI	8	Unmodified	_ISIMKWRI_					0	0	0			REV__tr|A0A7D7A007|A0A7D7A007_9CLOTYxeAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08230PE=4SV=1	REV__tr|A0A7D7A007|A0A7D7A007_9CLOTYxeAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08230PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.2835571169853	2	523.812605	1045.61066	2.217	0.0011613	1.445	0.00075688	3.6619	0.0019182	523.8123060231247	47.055	0.25325	48.437	48.251	48.504	1.3825					12	7	2	0	0	0	2.3239	1	19672	19672		18.135	0	1	545660	+		11751	15803	5892	5917	14255	14255					0.08967574084431362
ISIPSLRTP	9	Unmodified	_ISIPSLRTP_					0	0	0			REV__ENSG00000125965|ENST00000374369|GDF5	REV__ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2994262576103	2	492.297842	982.581131	2.4334	0.001198	0.42789	0.00021065	2.8613	0.0014086	492.2981708907128	46.541	0.36767	46.872	46.624	46.991	0.33034					21	12	2	0	0	0	0.46566	1	19493	19493		17.113	0	1	790350	+		11752	9686	5893	5918	14256	14256					0.08914333339953373
ISITTRRKRK	10	Unmodified	_ISITTRRKRK_					0	0	0			REV__ENSG00000064835|ENST00000350375|POU1F1	REV__ENSG00000064835|ENST00000350375|POU1F1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.2750121951103	3	420.273722	1257.79934	1.0647	0.00044745	-0.14964	-6.2888E-05	0.91502	0.00038456	420.2740497067513	92.458	0.45412	92.458	92.228	92.682	0					43	14	4	0	0	0	0.89803	2	38604	38604;38654		0.69767	0	1	10043000	+		11753	8666	5894	5919	14257;14258	14257					0.1807494298225265
ISITTRRKRK	10	Unmodified	_ISITTRRKRK_					0	0	0			REV__ENSG00000064835|ENST00000350375|POU1F1	REV__ENSG00000064835|ENST00000350375|POU1F1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2755615115166	3	420.273722	1257.79934	2.936	0.0012339	-1.8335	-0.00077057	1.1025	0.00046334	420.2733707292667	92.378	0.46343	92.546	92.281	92.744	0.16835					45	14	4	0	0	0	0.89803	1	38637	38637		0.69767	0	1	11168000	+		11754	8666	5894	5919	14259	14259					0.1807494298225265
ISITTRRKRK	10	Unmodified	_ISITTRRKRK_					0	0	0			REV__ENSG00000064835|ENST00000350375|POU1F1	REV__ENSG00000064835|ENST00000350375|POU1F1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2743102908134	3	420.273722	1257.79934	3.3589	0.0014116	-0.63112	-0.00026524	2.7277	0.0011464	420.2740252311794	91.325	0.39603	92.691	92.471	92.867	1.366					31	12	3	0	0	0	0.89803	1	38458	38458		0.69767	0	1	3143800	+		11755	8666	5894	5919	14260	14260					0.1807494298225265
ISITTRRKRK	10	Unmodified	_ISITTRRKRK_					0	0	0			REV__ENSG00000064835|ENST00000350375|POU1F1	REV__ENSG00000064835|ENST00000350375|POU1F1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	420.273722	1257.79934	1.0647	0.00044745	-0.14964	-6.2888E-05	0.91502	0.00038456	420.2740497067513	92.458	0.45412	92.458	92.228	92.682	0	-0.11162	0.0014576	NaN	0.69767	43	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10043000	+		11756	8666	5894	5919							0.1807494298225265
ISITTRRKRK	10	Unmodified	_ISITTRRKRK_					0	0	0			REV__ENSG00000064835|ENST00000350375|POU1F1	REV__ENSG00000064835|ENST00000350375|POU1F1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	420.273722	1257.79934	3.3589	0.0014116	-0.63112	-0.00026524	2.7277	0.0011464	420.2740252311794	91.325	0.39603	92.691	92.471	92.867	1.366	0.12181	0.00085052	NaN	0.69767	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3143800	+		11757	8666	5894	5919							0.1807494298225265
ISIVFVIVS	9	Unmodified	_ISIVFVIVS_					0	0	0			REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.8083679080009	2	488.807511	975.600469	2.6127	0.0012771	-2.5573	-0.00125	0.055341	2.7051E-05	488.8066579394873	76.484	0.34509	77.777	77.607	77.952	1.2938					17	10	2	0	0	0	0.49082	1	32107	32107		15.847	3.3156	1	1404800	+		11758	15634	5895	5920	14261	14261					0.11169289630856838
ISIVFVIVS	9	Unmodified	_ISIVFVIVS_					0	0	0			REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	488.807511	975.600469	1.6867	0.00082445	-4.0616	-0.0019853	-2.3749	-0.0011609	488.8057292522898	77.985	0.22102	77.985	77.905	78.126	0	0.14582	-0.00040031	NaN	15.847	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395820	+		11759	15634	5895	5920							0.11169289630856838
ISIVFVIVS	9	Unmodified	_ISIVFVIVS_					0	0	0			REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	488.807511	975.600469	2.6811	0.0013105	-3.716	-0.0018164	-1.0348	-0.00050584	488.805999397067	77.534	0.2495	77.85	77.701	77.95	0.31653	0.011484	-6.2391E-05	NaN	15.847	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	528240	+		11760	15634	5895	5920							0.11169289630856838
ISIVFVIVS	9	Unmodified	_ISIVFVIVS_					0	0	0			REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	REV__tr|A0A7D6ZFQ4|A0A7D6ZFQ4_9CLOTOligosaccharideflippasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18850PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	488.807511	975.600469	2.7879	0.0013628	-4.0163	-0.0019632	-1.2284	-0.00060043	488.805779691169	75.976	0.3696	77.743	77.507	77.877	1.7672	-0.095757	-0.00035599	NaN	15.847	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780120	+		11761	15634	5895	5920							0.11169289630856838
ISIVNQISI	9	Unmodified	_ISIVNQISI_					0	0	0			REV__tr|A0A553SQ37|A0A553SQ37_NIACIChemotaxisproteinCheWOS=NialliacirculansOX=1397GN=CEQ21_19650PE=4SV=1	REV__tr|A0A553SQ37|A0A553SQ37_NIACIChemotaxisproteinCheWOS=NialliacirculansOX=1397GN=CEQ21_19650PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.9037353396416	1	986.588073	985.580796	3.6157	0.0035672	-1.4239	-0.0014048	2.1917	0.0021623	986.5859405035977	92.864	0.28504	94.141	94.007	94.292	1.277					9	8	2	0	0	0	0.37774	1	39053	39053		21.537	0	1	743090	+		11762	15119	5896	5921	14262	14262					0.08742913620108084
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3087646365166	2	542.307875	1082.6012	2.0465	0.0011098	-0.8765	-0.00047533	1.17	0.00063448	542.3075298946252	83.273	0.36726	83.273	83.045	83.412	0					26	11	3	0	0	0	0.34572	1	34703	34703		23.148	2.6948	1	2273800	+		11763	15805	5897	5922	14263	14263					0.06320084279900584
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3091308474541	2	542.307875	1082.6012	2.2674	0.0012296	-0.60237	-0.00032667	1.665	0.00090295	542.307523643153	82.745	0.39681	83.016	82.817	83.214	0.27029					30	12	3	0	0	0	0.22519	1	34617	34617		30.225	3.3412	1	2984300	+		11764	15805	5897	5922	14264	14264					0.06320084279900584
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3099853396416	2	542.307875	1082.6012	3.709	0.0020114	-1.0822	-0.00058687	2.6268	0.0014246	542.3070757784719	81.809	0.43275	83.022	82.822	83.255	1.2125					34	13	3	0	0	0	0.34572	2	34347	34347;34387		23.148	2.6948	1	6572400	+		11765	15805	5897	5922	14265;14266	14265					0.06320084279900584
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	542.307875	1082.6012	2.0465	0.0011098	-0.8765	-0.00047533	1.17	0.00063448	542.3075298946252	83.273	0.36726	83.273	83.045	83.412	0	0.1922	-0.00029263	NaN	30.225	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2273800	+		11766	15805	5897	5922							0.06320084279900584
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	542.307875	1082.6012	2.2674	0.0012296	-0.60237	-0.00032667	1.665	0.00090295	542.307523643153	82.745	0.39681	83.016	82.817	83.214	0.27029	-0.065416	4.6962E-06	NaN	30.225	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2984300	+		11767	15805	5897	5922							0.06320084279900584
ISIYFVKDV	9	Unmodified	_ISIYFVKDV_					0	0	0			REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	REV__tr|A0A7D7A018|A0A7D7A018_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22295PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	542.307875	1082.6012	3.709	0.0020114	-1.0822	-0.00058687	2.6268	0.0014246	542.3070757784719	81.809	0.43275	83.022	82.822	83.255	1.2125	-0.059463	-0.00051571	NaN	30.225	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6572400	+		11768	15805	5897	5922							0.06320084279900584
ISKFRKNV	8	Unmodified	_ISKFRKNV_					0	0	0			REV__tr|A0A553SN01|A0A553SN01_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_23525PE=4SV=1	REV__tr|A0A553SN01|A0A553SN01_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_23525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3049499392509	2	496.306001	990.597449	1.5841	0.00078618	-3.5967	-0.0017851	-2.0127	-0.00099889	496.30440915894667	64.49	1.812	64.49	63.832	65.644	0					73	56	2	0	0	0	0.89008	1	27073	27073		2.5775	1.7838	1	794100	+		11769	15038	5898	5923	14267	14267					0.10177459296698999
ISKIVLILVTL	11	Unmodified	_ISKIVLILVTL_					0	0	0			REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2122680544853	4	303.713888	1210.82645	-2.5308	-0.00076865	2.3041	0.0006998	-0.22669	-6.8849E-05	303.71444406538706	97.123	0.64366	97.123	96.894	97.537	0					28	20	2	0	0	0	0.14606	1	40754	40754		0	0	1	1879400	+		11770	15839	5899	5924	14268	14268					0.2294661375008218
ISKSKGLKYI	10	Unmodified	_ISKSKGLKYI_					0	0	0		tr|A0A7D6ZZY6|A0A7D6ZZY6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08145PE=4SV=1	tr|A0A7D6ZZY6|A0A7D6ZZY6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08145PE=4SV=1	tr|A0A7D6ZZY6|A0A7D6ZZY6_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8555786013603	2	568.855524	1135.69649	2.489	0.0014159	-1.6576	-0.00094294	0.83143	0.00047296	568.8546024402528	88.257	0.81925	88.492	88.195	89.015	0.2347					82	25	5	0	0	0	0.89803	1	36934	36934		1.6526	1.3456	1	111350000			11771	17216	5900	5925	14269	14269					0.1340743747093711
ISLGSIEAAI	10	Unmodified	_ISLGSIEAAI_					0	0	0			REV__ENSG00000167971|ENST00000343516|CASKIN1	REV__ENSG00000167971|ENST00000343516|CASKIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2805663943291	2	487.281857	972.549162	2.3984	0.0011687	-1.1677	-0.00056901	1.2307	0.00059969	487.28119586766155	40.335	0.49294	41.645	41.421	41.914	1.3102					39	15	4	0	0	0	0.24174	1	16855	16855		43.858	5.8843	1	10433000	+		11772	10887	5901	5926	14270	14270					0.061789208661252815
ISLGSIEAAI	10	Unmodified	_ISLGSIEAAI_					0	0	0			REV__ENSG00000167971|ENST00000343516|CASKIN1	REV__ENSG00000167971|ENST00000343516|CASKIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2820312380791	2	487.281857	972.549162	1.8362	0.00089474	-0.088019	-4.289E-05	1.7482	0.00085185	487.2817408132448	39.89	0.49741	41.752	41.521	42.019	1.8624					52	15	5	0	0	0	0.24174	1	16681	16681		43.858	2.0187	1	11494000	+		11773	10887	5901	5926	14271	14271					0.061789208661252815
ISLHGVNYF	9	Unmodified	_ISLHGVNYF_					0	0	0			REV__ENSG00000162738|ENST00000368061|VANGL2	REV__ENSG00000162738|ENST00000368061|VANGL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2792236208916	2	525.274367	1048.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.049	1	45.993	45.493	46.493	1.9438								0	0	0	0.42089	1	18467	18467		6.7232	2.3939	1		+		11774	10659	5902	5927	14272	14272					0.01185473788791569
ISLLSCFPNV	10	Unmodified	_ISLLSCFPNV_					0	0	0		ENSG00000128274|ENST00000642412|A4GALT	ENSG00000128274|ENST00000642412|A4GALT	ENSG00000128274|ENST00000642412|A4GALT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7917968630791	2	546.791535	1091.56852	1.8279	0.00099949	-4.3692	-0.0023891	-2.5413	-0.0013896	546.7891465553347	83.407	0.47066	84.595	84.326	84.796	1.1879					30	14	3	0	0	0	0.48044	1	35014	35014		28.495	1.6109	1	4099400			11775	2363	5903	5928	14273	14273					0.026395538853876133
ISLLTNYFQNA	11	Unmodified	_ISLLTNYFQNA_					0	0	0			REV__tr|A0A553SQV5|A0A553SQV5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07365PE=4SV=1	REV__tr|A0A553SQV5|A0A553SQV5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3334838747978	2	642.335153	1282.65575	2.0067	0.001289	-2.8587	-0.0018362	-0.852	-0.00054727	642.3330252860463	43.965	0.28648	45.909	45.767	46.053	1.9438					13	8	2	0	0	0	0.94496	1	18426	18426		7.1017	4.1065	1	935130	+		11776	15137	5904	5929	14274	14274					0.02573051360673162
ISLNLSHLD	9	Unmodified	_ISLNLSHLD_					0	0	0			REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	REV__nc|ENSG00000144426|Q6ZS30-1|NBEAL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2784301638603	2	506.277106	1010.53966	2.6028	0.0013177	0.30494	0.00015439	2.9077	0.0014721	506.2775114177623	40.682	0.46984	42.008	41.74	42.21	1.3254					48	14	4	0	0	0	0.060242	1	17079	17079		63.961	2.3586	1	15687000	+		11777	10249	5905	5930	14275	14275					0.034811525806162535
ISLSFTTRS	9	Unmodified	_ISLSFTTRS_					0	0	0		ENST00000582754.5_1_17:39081604-39092927:-|nuORF;ENSG00000108244|ENST00000209718|KRT23;CON__Q9C075	ENST00000582754.5_1_17:39081604-39092927:-|nuORF	ENST00000582754.5_1_17:39081604-39092927:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	505.8254882693291	2	506.277106	1010.53966	2.6028	0.0013177	0.30494	0.00015439	2.9077	0.0014721	506.2775114177623	40.682	0.46984	42.008	41.74	42.21	1.3254					48	14	4	0	0	0	0.1144	1	16967	16967		13.906	0	1	15687000		+	11778	364	5906	5931	14276	14276					0.03481152580627622
ISMLYQDNND	10	Unmodified	_ISMLYQDNND_					0	0	0		ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5353881716728	4	303.88549	1211.51285	-0.0025772	-7.8317E-07	-1.9447	-0.00059096	-1.9473	-0.00059174	304.13685673675263	22.031	0.62626	22.254	21.81	22.436	0.223					31	20	2	0	0	0	0.12555	1	9209	9209		0.69767	0.23933	1	392660			11779	4689	5907	5932	14277	14277					-0.08444324092874922
ISMLYQDNND	10	Unmodified	_ISMLYQDNND_					0	0	0		ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5364562869072	4	303.88549	1211.51285	0.02922	8.8797E-06	-2.5644	-0.00077929	-2.5352	-0.00077042	303.88361132694683	22.623	0.92512	22.856	22.357	23.282	0.23306					46	30	2	0	0	0	0.12555	1	9265	9265		0.69767	0.24315	1	549930			11780	4689	5907	5932	14278	14278					-0.08444324092874922
ISMQWWQQWK	10	Unmodified	_ISMQWWQQWK_					0	0	0		ENSG00000170832|ENST00000300896|USP32;USP32|p.P757Lfs*7|1|0.07|ENSG00000170832|chr17:60211424-60211425|-/AAGTTCTGATCTCA|frameshift_variant	ENSG00000170832|ENST00000300896|USP32	ENSG00000170832|ENST00000300896|USP32	MSMS	GG20161007_CRH_Patient100_A02_02	2	710.8448974490166	2	710.845165	1419.67578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.916	1	47.247	46.747	47.747	0.33034								0	0	0	0.66052	1	19682	19682		3.5965	0.31518	1				11781	4163	5908	5933	14279	14279					-0.017274761803946603
ISNACCCPHL	10	Unmodified	_ISNACCCPHL_					0	0	0		ENST00000504090.1_1_5:110560181-110700676:+|nuORF	ENST00000504090.1_1_5:110560181-110700676:+|nuORF	ENST00000504090.1_1_5:110560181-110700676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.7243530154228	2	530.722272	1059.42999	2.7452	0.0014569	-1.2973	-0.00068849	1.4479	0.00076843	530.7216070093955	89.568	0.28757	89.791	89.615	89.903	0.22359					16	8	2	0	0	0	0.88022	1	37511	37511		3.5965	0.70727	1	666620			11782	6993	5909	5934	14280	14280					-0.09734635626227828
ISNEFKVEV	9	Unmodified	_ISNEFKVEV_					0	0	0		ENST00000477264.1_1_1:9790568-9793533:-|nuORF;nc|ENSG00000171603|O94985-2|CLSTN1;ENSG00000171603|ENST00000377298|CLSTN1	ENST00000477264.1_1_1:9790568-9793533:-|nuORF	ENST00000477264.1_1_1:9790568-9793533:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7850219607353	2	532.784764	1063.55498	0.86559	0.00046117	-0.037492	-1.9975E-05	0.8281	0.0004412	532.7847804996095	24.763	0.30479	26.448	26.298	26.603	1.6845					22	9	3	0	0	0	0.073578	1	10347	10347		58.679	0	1	2853200			11783	4199	5910	5935	14281	14281					0.025740193777892273
ISNNYRKI	8	Unmodified	_ISNNYRKI_					0	0	0		ENST00000358273.8_2_17:29701813-29701876:+|nuORF	ENST00000358273.8_2_17:29701813-29701876:+|nuORF	ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2867919802666	2	504.285266	1006.55598	3.0896	0.0015581	1.1192	0.00056439	4.2088	0.0021224	504.2857134503819	62.427	0.33937	63.843	63.65	63.989	1.4151					23	10	3	0	0	0	0.82039	1	26165	26165		19.439	3.5918	1	1889400			11784	6011	5911	5936	14282	14282					0.0529627853737793
ISNNYRKI	8	Unmodified	_ISNNYRKI_					0	0	0		ENST00000358273.8_2_17:29701813-29701876:+|nuORF	ENST00000358273.8_2_17:29701813-29701876:+|nuORF	ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2862121462822	2	504.285266	1006.55598	2.5567	0.0012893	0.71302	0.00035956	3.2697	0.0016489	504.28556569937655	61.78	0.34588	63.737	63.562	63.908	1.9571					23	10	3	0	0	0	0.82039	1	25916	25916		19.439	0	1	1449200			11785	6011	5911	5936	14283	14283					0.0529627853737793
ISNSHWLLP	9	Unmodified	_ISNSHWLLP_					0	0	0			REV__ENST00000571449.1_1_16:3183118-3184784:-|nuORF	REV__ENST00000571449.1_1_16:3183118-3184784:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1916381716728	2	533.787641	1065.56073	1.7722	0.00094596	-0.21421	-0.00011434	1.5579	0.00083161	533.7877989610098	39.275	0.64926	41.111	40.817	41.466	1.8366					47	20	3	0	0	0	0.11787	1	16387	16387		5.2307	0	1	1882100	+		11786	13965	5912	5937	14284	14284					0.030571626801247476
ISPDGKTLV	9	Unmodified	_ISPDGKTLV_					0	0	0		ENSG00000213822|ENST00000396477|CEACAM18	ENSG00000213822|ENST00000396477|CEACAM18	ENSG00000213822|ENST00000396477|CEACAM18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2712890505791	2	465.26875	928.522947	4.3732	0.0020347	2.6204	0.0012192	6.9936	0.0032539	465.27033756012014	92.498	0.35966	93.434	93.244	93.604	0.93623					25	10	3	0	0	0	0.76456	1	38905	38905		4.756	0.42677	1	1382200			11787	5230	5913	5938	14285	14285					0.05582651694658125
ISPGRYFLL	9	Unmodified	_ISPGRYFLL_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3101684451103	2	533.30821	1064.60187	3.3213	0.0017713	-0.54594	-0.00029115	2.7754	0.0014801	533.3081288254418	60.784	0.4142	62.204	61.995	62.409	1.4196					32	12	3	0	0	0	0.20244	1	25474	25474		32.786	0.4802	1	3538200			11788	4271	5914	5939	14286	14286					0.07214923719629951
ISPKEHKLK	9	Unmodified	_ISPKEHKLK_					0	0	0		ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3328124880791	2	540.332216	1078.64988	1.5162	0.00081928	-1.485	-0.00080239	0.03125	1.6885E-05	540.3316965259384	67.303	0.99051	67.303	66.99	67.98	0					49	31	2	0	0	0	0.83753	1	28236	28236		1.8442	0.19162	1	928520			11789	1179	5915	5940	14287	14287					0.1136999763964468
ISPKEHKLK	9	Unmodified	_ISPKEHKLK_					0	0	0		ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3333007693291	2	540.332216	1078.64988	1.7646	0.00095349	-0.98471	-0.00053207	0.77993	0.00042142	540.3319359797522	67.377	0.94784	67.7	67.366	68.313	0.32269					39	30	3	0	0	0	0.83753	1	28169	28169		1.8442	0.19162	1	1096000			11790	1179	5915	5940	14288	14288					0.1136999763964468
ISPSTVTVTGA	11	Unmodified	_ISPSTVTVTGA_					0	0	0		tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7827026247978	2	516.782222	1031.54989	0.88647	0.00045811	0.28495	0.00014726	1.1714	0.00060537	516.7823645846651	16.071	0.44028	16.071	15.932	16.373	0					34	13	3	0	0	0	0.58697	1	6707	6707		21.537	2.28	1	2247100			11791	16137	5916	5941	14289	14289					0.035377155151991246
ISPSTVTVTGA	11	Unmodified	_ISPSTVTVTGA_					0	0	0		tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.7830688357353	2	516.782222	1031.54989	0.52945	0.00027361	0.57637	0.00029786	1.1058	0.00057147	516.7825834338443	16.003	0.66356	16.133	15.839	16.503	0.13022					50	22	3	0	0	0	0.29237	3	6684	6582;6684;6728		32.786	5.1569	1	3308200			11792	16137	5916	5941	14290;14291;14292	14291					0.035377155151991246
ISPSTVTVTGA	11	Unmodified	_ISPSTVTVTGA_					0	0	0		tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7818481326103	2	516.782222	1031.54989	0.424	0.00021912	-0.46147	-0.00023848	-0.03747	-1.9364E-05	516.7818340870119	15.42	0.48019	16.247	15.981	16.462	0.82643					48	20	4	0	0	0	0.11083	2	6452	6349;6452		53.833	4.2785	1	5417200			11793	16137	5916	5941	14293;14294	14294					0.035377155151991246
ISPSTVTVTGA	11	Unmodified	_ISPSTVTVTGA_					0	0	0		tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	tr|A0A553SH58|A0A553SH58_NIACIYbbR-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7828246951103	2	516.782222	1031.54989	0.41161	0.00021271	-0.45463	-0.00023494	-0.043018	-2.2231E-05	516.7818994249119	15.309	0.44215	16.205	15.96	16.402	0.89664					48	16	4	0	0	0	0.1562	2	6330	6330;6382		45.7	3.7441	1	4545600			11794	16137	5916	5941	14295;14296	14295					0.035377155151991246
ISQECPTLAP	10	Unmodified	_ISQECPTLAP_					0	0	0			REV__ENST00000554460.5_1_14:100540857-100568654:+|nuORF	REV__ENST00000554460.5_1_14:100540857-100568654:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	353.5109741091728	3	353.511075	1057.5114	-1.0147	-0.00035872	1.7341	0.00061302	0.71934	0.00025429	353.5113816660006	76.026	0.31264	76.026	75.852	76.164	0					23	9	3	0	0	0	0.80702	1	31653	31653		7.0371	0	1	2637600	+		11795	13854	5917	5942	14297	14297					-0.015059133909971933
ISQKPIDLKSV	11	Unmodified	_ISQKPIDLKSV_					0	0	0			REV__ENST00000432786.5_2_7:98957158-98963549:+|nuORF	REV__ENST00000432786.5_2_7:98957158-98963549:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	614.2753784060478	2	614.368995	1226.72344	1.8913	0.001162	-0.81568	-0.00050113	1.0756	0.00066083	614.3685251260789	69.978	0.40913	69.978	69.77	70.179	0					41	12	4	0	0	0	0.14606	1	29180	29180		13.042	0	1	12096000	+		11796	11923	5918	5943	14298	14298					0.11914501291448687
ISQRFQIM	8	Unmodified	_ISQRFQIM_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	511.2657348513603	2	511.776219	1021.53789	2.5165	0.0012879	1.8231	0.00093303	4.3396	0.0022209	511.7766511374316	76.73	0.38311	78.498	78.353	78.736	1.7672					21	11	3	0	0	0	2.3239	1	32142	32142		16.942	1.0951	1	1937100			11797	1440	5919	5944	14299	14299					0.027978202910276195
ISRLVALLV	9	Unmodified	_ISRLVALLV_					0	0	0		ENSG00000177981|ENST00000317697|ASB8	ENSG00000177981|ENST00000317697|ASB8	ENSG00000177981|ENST00000317697|ASB8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3348571658134	2	492.334227	982.653902	2.954	0.0014544	-1.1793	-0.00058061	1.7747	0.00087375	492.3336708213271	70.342	0.50868	71.695	71.397	71.906	1.3536					37	15	3	0	0	0	0.19075	1	29513	29513		34.102	5.6156	1	3993600			11798	4468	5920	5945	14300	14300					0.1618808713336648
ISRLVALLV	9	Unmodified	_ISRLVALLV_					0	0	0		ENSG00000177981|ENST00000317697|ASB8	ENSG00000177981|ENST00000317697|ASB8	ENSG00000177981|ENST00000317697|ASB8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3351013064384	2	492.334227	982.653902	2.9191	0.0014371	-0.62236	-0.00030641	2.2967	0.0011307	492.3338350692007	69.719	0.44458	71.557	71.372	71.817	1.8378					32	13	3	0	0	0	0.19075	1	29263	29263		34.102	1.797	1	3400700			11799	4468	5920	5945	14301	14301					0.1618808713336648
ISRNIPLM	8	Unmodified	_ISRNIPLM_					0	0	0		tr|A0A7D6ZGD8|A0A7D6ZGD8_9CLOTUDP-N-acetylmuramate--L-alanineligaseOS=ClostridiumintestinaleOX=36845GN=murCPE=3SV=1	tr|A0A7D6ZGD8|A0A7D6ZGD8_9CLOTUDP-N-acetylmuramate--L-alanineligaseOS=ClostridiumintestinaleOX=36845GN=murCPE=3SV=1	tr|A0A7D6ZGD8|A0A7D6ZGD8_9CLOTUDP-N-acetylmuramate--L-alanineligaseOS=ClostridiumintestinaleOX=36845GN=murCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2766296267509	2	472.273312	942.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.631	1	67.03	66.53	67.53	1.3989								0	0	0	1.0178	1	27525	27525		2.8892	0	1				11800	17071	5921	5946	14302	14302					0.05850721779347623
ISRQFMAL	8	Unmodified	_ISRQFMAL_					0	0	0		tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2650939822197	2	483.265487	964.516422	0.75413	0.00036445	-1.122	-0.00054223	-0.36788	-0.00017778	483.26460739531524	56.637	0.23676	58.605	58.456	58.693	1.9684					12	7	2	0	0	0	0.88663	1	23773	23773		4.756	0.42677	1	1275700			11801	16087	5922	5947	14303	14303					0.032744352623012674
ISRQFMAL	8	Unmodified	_ISRQFMAL_					0	0	0		tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	tr|A0A553SFZ7|A0A553SFZ7_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09835PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	483.265487	964.516422	1.1469	0.00055426	-1.8842	-0.00091058	-0.73733	-0.00035633	483.26462431051357	57.251	0.19707	58.666	58.521	58.718	1.4145	-0.015345	-0.00024596	NaN	4.756	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	891260			11802	16087	5922	5947							0.032744352623012674
ISRQKAQV	8	Unmodified	_ISRQKAQV_					0	0	0		tr|A0A553SP77|A0A553SP77_NIACIRNA-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_25885PE=4SV=1	tr|A0A553SP77|A0A553SP77_NIACIRNA-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_25885PE=4SV=1	tr|A0A553SP77|A0A553SP77_NIACIRNA-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_25885PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2802917361259	2	465.279983	928.545414	2.1165	0.00098478	0.56795	0.00026426	2.6845	0.001249	465.27997940920636	70.772	0.76273	71.096	70.924	71.687	0.32359					32	23	2	0	0	0	0.88587	1	29632	29632		5.2307	0	1	1166000			11803	16455	5923	5948	14304	14304					0.07828295882939074
ISRQLGLGN	9	Unmodified	_ISRQLGLGN_					0	0	0			REV__ENST00000494399.5_1_1:45477937-45478571:+|nuORF	REV__ENST00000494399.5_1_1:45477937-45478571:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2784606814384	2	479.277441	956.540328	2.692	0.0012902	-0.8179	-0.000392	1.8741	0.00089823	479.27700754469305	80.254	0.49853	80.545	80.279	80.778	0.29056					41	15	3	0	0	0	0.8432	1	33530	33530		1.4819	0.68827	1	5858200	+		11804	13454	5924	5949	14305	14305					0.06031992020314192
ISRRERPSEVV	11	Unmodified	_ISRRERPSEVV_					0	0	0			REV__TENM2|p.C829Dfs*72|1|0.12|ENSG00000145934|chr5:168162672-168162673|-/GA|frameshift_variant	REV__TENM2|p.C829Dfs*72|1|0.12|ENSG00000145934|chr5:168162672-168162673|-/GA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	664.4680053591728	2	664.375675	1326.7368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.27	109.77	110.77	0.16133								0	0	0	0.63775	1	47834	47834		1.4819	0	1		+		11805	10290	5925	5950	14306	14306					0.08649752123392318
ISSGQCHAA	9	Unmodified	_ISSGQCHAA_					0	0	0			REV__nc|ENSG00000100450|P20718-2|GZMH	REV__nc|ENSG00000100450|P20718-2|GZMH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	873.3926269412041	1	873.388327	872.381051	2.7982	0.002444	0.97257	0.00084943	3.7708	0.0032934	873.3883710704818	100.69	0.18551	100.77	100.66	100.85	0.072716					11	5	3	0	0	0	0.76456	1	42160	42160		4.756	2.1785	1	6866700	+		11806	8991	5926	5951	14307	14307					-0.06024464599329349
ISSGQCHAA	9	Unmodified	_ISSGQCHAA_					0	0	0			REV__nc|ENSG00000100450|P20718-2|GZMH	REV__nc|ENSG00000100450|P20718-2|GZMH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	873.388327	872.381051	1.1761	0.0010272	1.6097	0.0014059	2.7858	0.0024331	873.3891446305247	100.74	0.12	100.74	100.66	100.78	0	-0.022325	0.00020269	NaN	4.756	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7730800	+		11807	8991	5926	5951							-0.06024464599329349
ISSGQCHAA	9	Unmodified	_ISSGQCHAA_					0	0	0			REV__nc|ENSG00000100450|P20718-2|GZMH	REV__nc|ENSG00000100450|P20718-2|GZMH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	873.388327	872.381051	2.7982	0.002444	0.97257	0.00084943	3.7708	0.0032934	873.3883710704818	100.69	0.18551	100.77	100.66	100.85	0.072716	0.0066216	-0.00035377	NaN	4.756	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6866700	+		11808	8991	5926	5951							-0.06024464599329349
ISSGQCHAA	9	Unmodified	_ISSGQCHAA_					0	0	0			REV__nc|ENSG00000100450|P20718-2|GZMH	REV__nc|ENSG00000100450|P20718-2|GZMH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	873.388327	872.381051	3.1279	0.0027319	1.0508	0.00091778	4.1787	0.0036496	873.3896707635992	100.59	0.13633	100.77	100.65	100.79	0.18047	0.015703	-0.00028543	NaN	4.756	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4151600	+		11809	8991	5926	5951							-0.06024464599329349
ISSHIPLIIQF	11	Unmodified	_ISSHIPLIIQF_					0	0	0		ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3758422732353	2	634.374081	1266.73361	2.2575	0.0014321	0.28672	0.00018189	2.5442	0.001614	634.3739727862899	76.769	0.56406	78.063	77.762	78.326	1.2938					48	17	4	0	0	0	0.09159	3	32173	32173;32216;32274		57.722	6.0922	1	6205700			11810	3476	5927	5952	14308;14309;14310	14308					0.11091109016706469
ISSHIPLIIQF	11	Unmodified	_ISSHIPLIIQF_					0	0	0		ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3748046755791	2	634.374081	1266.73361	2.306	0.0014629	-0.43011	-0.00027285	1.8759	0.00119	634.3733985103092	76.236	0.50139	78.004	77.658	78.159	1.7672					45	15	4	0	0	0	0.03983	3	31985	31933;31985;32037		70.332	14.829	1	5090000			11811	3476	5927	5952	14311;14312;14313	14312					0.11091109016706469
ISSINLFAF	9	Unmodified	_ISSINLFAF_					0	0	0			REV__tr|A0A553ST54|A0A553ST54_NIACIAmidohydrolase/deacetylasefamilymetallohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_04105PE=4SV=1	REV__tr|A0A553ST54|A0A553ST54_NIACIAmidohydrolase/deacetylasefamilymetallohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_04105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2785522341728	2	506.279118	1010.54368	2.014	0.0010196	-3.6579	-0.0018519	-1.6439	-0.00083227	506.2775395390222	40.273	0.46536	42.135	41.862	42.327	1.8624					38	14	3	0	0	0	0.1388	1	16919	16919		39.95	9.3132	1	10051000	+		11812	15229	5928	5953	14314	14314					0.03883242074323334
ISSISHEQYL	10	Unmodified	_ISSISHEQYL_					0	0	0			REV__WNK3|p.L1380Ffs*18|1|0.04|ENSG00000196632|chrX:54237426-54237427|-/G|frameshift_variant	REV__WNK3|p.L1380Ffs*18|1|0.04|ENSG00000196632|chrX:54237426-54237427|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.8007690310478	2	588.798403	1175.58225	1.7702	0.0010423	0.30233	0.00017801	2.0725	0.0012203	588.7986526152929	46.396	0.75054	47.771	47.493	48.243	1.3751					63	23	4	0	0	0	0.17319	1	19433	19433		52.268	0	1	7191500	+		11813	11643	5929	5954	14315	14315					0.0014850291820494022
ISSNSLVVF	9	Unmodified	_ISSNSLVVF_					0	0	0			REV__ENST00000482856.1_1_1:223116165-223116675:+|nuORF	REV__ENST00000482856.1_1_1:223116165-223116675:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2699767947197	2	483.26875	964.522947	1.7826	0.00086149	-0.21393	-0.00010339	1.5687	0.0007581	483.2684992865499	40.074	0.31355	41.936	41.738	42.051	1.8624					20	9	3	0	0	0	0.27148	1	16771	16771		26.884	2.8631	1	1533800	+		11814	10473	5930	5955	14316	14316					0.03926651694666816
ISSPLTKSISL	11	Unmodified	_ISSPLTKSISL_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3433715701103	2	573.342446	1144.67034	1.6345	0.00093711	-0.12421	-7.1215E-05	1.5103	0.00086589	573.3425237746071	49.109	0.43785	50.497	50.263	50.701	1.388					26	13	3	0	0	0	0.10205	1	20530	20530		55.467	11.485	1	1702800			11815	4161	5931	5956	14317	14317					0.10379123508801058
ISSPLTKSISL	11	Unmodified	_ISSPLTKSISL_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.3434326052666	2	573.342446	1144.67034	2.0581	0.00118	-0.95555	-0.00054786	1.1026	0.00063214	573.3418137828074	48.554	0.58895	50.531	50.297	50.886	1.9772					30	18	3	0	0	0	0.10306	1	20319	20319		55.249	15.009	1	1881900			11816	4161	5931	5956	14318	14318					0.10379123508801058
ISSPTEIWS	9	Unmodified	_ISSPTEIWS_					0	0	0			REV__nc|ENSG00000136535|Q16650-2|TBR1	REV__nc|ENSG00000136535|Q16650-2|TBR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7579223513603	2	510.25584	1018.49713	0.38346	0.00019566	-2.5627	-0.0013076	-2.1792	-0.001112	510.25383774910574	12.042	0.15185	12.829	12.724	12.876	0.78751					11	4	3	0	0	0	0.10993	1	4993	4993		46.021	5.7817	1	834880	+		11817	9985	5932	5957	14319	14319					-0.0113824254760857
ISSPTETER	9	Unmodified	_ISSPTETER_					0	0	0		ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	ENSG00000163191|ENST00000271638|S100A11	ENSG00000163191|ENST00000271638|S100A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2539855837822	2	510.253828	1018.4931	0.10312	5.2615E-05	1.5888	0.0008107	1.6919	0.00086332	510.25371682370786	12.207	0.25207	12.901	12.696	12.948	0.69396					14	7	3	0	0	0	0.087723	1	5066	5066		53.404	1.1357	1	1015900			11818	3667	5933	5958	14320	14320					-0.015403320413270194
ISSPTETER	9	Unmodified	_ISSPTETER_					0	0	0		ENSG00000163191|ENST00000271638|S100A11;ENST00000478109.1_1_1:152005140-152020324:-|nuORF	ENSG00000163191|ENST00000271638|S100A11	ENSG00000163191|ENST00000271638|S100A11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	510.253828	1018.4931	0.38347	0.00019566	1.3792	0.00070374	1.7627	0.0008994	510.25383774910574	12.042	0.15185	12.829	12.724	12.876	0.78751	-0.035633	-7.1661E-05	NaN	53.404	11	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	834880			11819	3667	5933	5958							-0.015403320413270194
ISSSSFSR	8	Unmodified	_ISSSSFSR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7196533083916	2	435.719424	869.424296	0.18252	7.9529E-05	0.082692	3.603E-05	0.26521	0.00011556	435.7194866716216	13.948	0.21514	14.674	14.535	14.75	0.72639					18	6	3	0	0	0	0.22215	1	5770	5770		78.728	13.493	1	14858000		+	11820	343	5934	5959	14321	14321					-0.015639515503721668
ISSSSFSR	8	Unmodified	_ISSSSFSR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENST00000562022.1_1_15:43093683-43094592:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7196533083916	2	435.719424	869.424296	0.24319	0.00010596	0.27678	0.0001206	0.51997	0.00022656	435.7195380206992	13.799	0.2201	14.627	14.516	14.736	0.82789					19	6	4	0	0	0	0.065974	1	5711	5711		99.799	14.527	1	14354000		+	11821	343	5934	5959	14322	14322					-0.015639515503721668
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1413452029228	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.81538	1	0.81538	0.31538	1.3154	0								0	0	0	1.0178	1	334	334		0.45834	0	1		+		11822	9515	5935	5960	14323	14323					-0.04654497226999865
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1424133181572	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.131	1	1.131	0.63098	1.631	0								0	0	0	1.0178	1	463	463		0.45834	0	1		+		11823	9515	5935	5960	14324	14324					-0.04654497226999865
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418945193291	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.424	1	2.424	1.924	2.924	0								0	0	0	1.0178	1	994	994		0.45834	0	1		+		11824	9515	5935	5960	14325	14325					-0.04654497226999865
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1413452029228	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5055	1	3.5055	3.0055	4.0055	0								0	0	0	1.0178	1	1439	1439		0.45834	0	1		+		11825	9515	5935	5960	14326	14326					-0.04654497226999865
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415893435478	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9406	1	3.9406	3.4406	4.4406	0								0	0	0	1.0178	1	1619	1619		0.45834	0	1		+		11826	9515	5935	5960	14327	14327					-0.04654497226999865
ISSTTETY	8	Unmodified	_ISSTTETY_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1417419314384	3	301.143157	900.407643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0707	1	4.0707	3.5707	4.5707	0								0	0	0	1.0178	1	1673	1673		0.45834	0	1		+		11827	9515	5935	5960	14328	14328					-0.04654497226999865
ISTIKTRLR	9	Unmodified	_ISTIKTRLR_					0	0	0		tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3531371951103	2	544.35094	1086.68733	3.2503	0.0017693	1.0841	0.00059015	4.3344	0.0023594	544.3514170997342	105.98	0.28168	106.14	105.99	106.27	0.16174					40	14	5	0	0	0	0.84195	1	45192	45192		1.6526	0.17072	1	764290000			11828	16686	5936	5961	14329	14329					0.14745088905260673
ISTIKTRLR	9	Unmodified	_ISTIKTRLR_					0	0	0		tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	tr|A0A553SUA9|A0A553SUA9_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_06660PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	544.35094	1086.68733	0.98428	0.00053579	3.8819	0.0021131	4.8662	0.0026489	544.3530147533766	106.09	0.16379	106.09	105.99	106.15	0	-0.036726	0.0021554	NaN	1.6526	24	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260900000			11829	16686	5936	5961							0.14745088905260673
ISTLILHRG	9	Unmodified	_ISTLILHRG_					0	0	0		ENST00000533028.7_3_1:100488049-100488157:+|nuORF	ENST00000533028.7_3_1:100488049-100488157:+|nuORF	ENST00000533028.7_3_1:100488049-100488157:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.3137695193291	2	505.311284	1008.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.103	1	40.416	39.916	40.916	0.31263								0	0	0	0.42693	1	16862	16862		1.8442	0	1				11830	7181	5937	5962	14330	14330					0.10405441951138528
ISTLQSGIV	9	Unmodified	_ISTLQSGIV_					0	0	0			REV__ENST00000516201.1_2:234184409-234184622:+|nuORF	REV__ENST00000516201.1_2:234184409-234184622:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	459.2699767947197	2	459.26875	916.522947	3.1232	0.0014344	-0.5803	-0.00026651	2.5429	0.0011679	459.2684500019424	59.669	0.51134	61.638	61.376	61.887	1.969					48	16	4	0	0	0	0.059546	2	25075	24987;25075		64.236	5.5575	1	40326000	+		11831	13604	5938	5963	14331;14332	14332					0.06134651694662807
ISTMGKLLV	9	Unmodified	_ISTMGKLLV_					0	0	0			REV__ENSG00000236104|ENST00000431845|ZBTB22	REV__ENSG00000236104|ENST00000431845|ZBTB22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2915222048759	2	481.291171	960.567789	2.1274	0.0010239	-2.3133	-0.0011134	-0.1859	-8.9473E-05	481.2898906236697	66.044	0.88332	67.443	67.184	68.068	1.3989					48	28	2	0	0	0	0.35391	1	27711	27711		22.736	3.4793	1	2031400	+		11832	11906	5939	5964	14333	14333					0.08592759236341863
ISTMGKLLV	9	Unmodified	_ISTMGKLLV_					0	0	0			REV__ENSG00000236104|ENST00000431845|ZBTB22	REV__ENSG00000236104|ENST00000431845|ZBTB22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2908508181572	2	481.291171	960.567789	1.6303	0.00078463	-2.9593	-0.0014243	-1.329	-0.00063965	481.2897907531161	65.604	0.82746	67.512	67.28	68.107	1.9085					45	26	2	0	0	0	0.35391	1	27526	27526		22.736	2.2827	1	1695700	+		11833	11906	5939	5964	14334	14334					0.08592759236341863
ISTMGKLLV	9	Unmodified	_ISTMGKLLV_					0	0	0			REV__ENSG00000236104|ENST00000431845|ZBTB22	REV__ENSG00000236104|ENST00000431845|ZBTB22	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	481.291171	960.567789	1.6303	0.00078463	-2.9593	-0.0014243	-1.329	-0.00063965	481.2897907531161	65.604	0.82746	67.512	67.28	68.107	1.9085	0.034523	-0.00031001	NaN	22.736	45	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1695700	+		11834	11906	5939	5964							0.08592759236341863
ISTPIVRSPLL	11	Unmodified	_ISTPIVRSPLL_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2522460818291	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.092	1	69.414	68.914	69.914	0.32224								0	0	0	0.63775	1	28920	28920		1.2148	0.25256	1		+		11835	10112	5940	5965	14335	14335					0.14403109016711824
ISTPIVRSPLL	11	Unmodified	_ISTPIVRSPLL_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2527343630791	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.885	1	29.164	28.664	29.664	1.2789								0	0	0	0.63775	1	11685	11685		2.4348	1.22	1		+		11836	10112	5940	5965	14336	14336					0.14403109016711824
ISTPVIRTF	9	Unmodified	_ISTPVIRTF_					0	0	0		nc|ENSG00000048828|Q9NZB2-6|FAM120A;FAM120A|p.R999*|1|0.08|ENSG00000048828|chr9:93562253-93562254|-/T|frameshift_variant;FAM120A|p.S1040Lfs*12|1|0.09|ENSG00000048828|chr9:93564300-93564301|-/C|frameshift_variant;FAM120A|p.V1027Tfs*33|1|0.06|ENSG00000048828|chr9:93564260-93564261|-/GACTGTATTTCCCC|frameshift_variant;nc|ENSG00000048828|Q9NZB2-4|FAM120A;ENSG00000048828|ENST00000277165|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3066284060478	2	517.305667	1032.59678	2.0808	0.0010764	0.31224	0.00016152	2.393	0.0012379	517.3057946608094	42.99	0.41701	44.911	44.694	45.111	1.9211					31	13	4	0	0	0	0.075994	1	18025	18025		57.722	17.772	1	12172000			11837	7820	5941	5966	14337	14337					0.08178619856994374
ISTRKMKK	8	Unmodified	_ISTRKMKK_					0	0	0			REV__ENST00000342444.8_1_10:73970511-73973025:-|nuORF	REV__ENST00000342444.8_1_10:73970511-73973025:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3052856326103	2	496.307687	990.60082	1.4082	0.00069888	-3.4558	-0.0017151	-2.0476	-0.0010162	496.3061943926671	66.753	0.57286	66.753	66.512	67.085	0					31	17	3	0	0	0	0.88587	1	27745	27745		5.2307	0.90143	1	2170400	+		11838	12504	5942	5967	14338	14338					0.10514386079069027
ISTRLVSSV	9	Unmodified	_ISTRLVSSV_					0	0	0		nc|ENSG00000167695|Q8TBR7-1|TLCD3A;ENSG00000167695|ENST00000308278|TLCD3A	nc|ENSG00000167695|Q8TBR7-1|TLCD3A	nc|ENSG00000167695|Q8TBR7-1|TLCD3A	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2888366580009	2	481.287474	960.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.456	1	67.778	67.278	68.278	0.32269								0	0	0	0.42693	1	28243	28243		4.756	0	1				11839	3986	5943	5968	14339	14339					0.0785374296029886
ISTSLISVS	9	Unmodified	_ISTSLISVS_					0	0	0			REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.5172607302666	1	906.514239	905.506963	1.6051	0.001455	1.2688	0.0011502	2.8739	0.0026052	906.5154881839159	66.908	0.31937	66.908	66.735	67.054	0					17	9	2	0	0	0	0.042029	1	27849	27849		74.423	16.951	1	1275300	+		11840	15598	5944	5969	14340	14340					0.0504294545777384
ISTSLISVS	9	Unmodified	_ISTSLISVS_					0	0	0			REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	906.5161620974541	1	906.514239	905.506963	1.9895	0.0018035	0.12843	0.00011642	2.1179	0.0019199	906.5141852146718	66.48	0.28544	66.804	66.653	66.939	0.32449					18	8	3	0	0	0	0.037761	1	27806	27806		78.149	7.0158	1	955260	+		11841	15598	5944	5969	14341	14341					0.0504294545777384
ISTSLISVS	9	Unmodified	_ISTSLISVS_					0	0	0			REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	906.5170776247978	1	906.514239	905.506963	2.6465	0.0023991	0.34074	0.00030888	2.9872	0.002708	906.5146158033934	65.248	0.37303	66.647	66.476	66.849	1.3989					25	11	3	0	0	0	0.029093	1	27361	27361		88.904	7.2905	1	3211100	+		11842	15598	5944	5969	14342	14342					0.0504294545777384
ISTSLISVS	9	Unmodified	_ISTSLISVS_					0	0	0			REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	REV__tr|A0A7D6W1V8|A0A7D6W1V8_9CLOTGerAB/ArcD/ProYfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	906.5167114138603	1	906.514239	905.506963	1.6779	0.0015211	0.2945	0.00026696	1.9724	0.001788	906.5143482705369	64.807	0.3754	66.735	66.551	66.926	1.928					21	11	2	0	0	0	0.033794	1	27175	27175		81.613	7.1903	1	1912100	+		11843	15598	5944	5969	14343	14343					0.0504294545777384
ISVGLLSVAA	10	Unmodified	_ISVGLLSVAA_					0	0	0		nc|ENSG00000164935|Q9H295-2|DCSTAMP;ENSG00000164935|ENST00000297581|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2885009646416	2	465.286943	928.559333	2.1585	0.0010043	-0.31871	-0.00014829	1.8398	0.00085602	465.28683369647035	65.178	0.98827	65.178	64.881	65.87	0					86	30	5	0	0	0	0.24174	1	27079	27079		43.858	0	1	63578000			11844	3805	5945	5970	14344	14344					0.09219528591358994
ISVGLLSVAA	10	Unmodified	_ISVGLLSVAA_					0	0	0		nc|ENSG00000164935|Q9H295-2|DCSTAMP;ENSG00000164935|ENST00000297581|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2871276736259	2	465.286943	928.559333	2.5956	0.0012077	-0.47016	-0.00021876	2.1254	0.00098892	465.28681104270163	64.662	1.0186	64.989	64.689	65.707	0.32689					88	31	5	0	0	0	0.24174	2	27224	27224;27273		43.858	5.8843	1	86604000			11845	3805	5945	5970	14345;14346	14345					0.09219528591358994
ISVGLLSVAA	10	Unmodified	_ISVGLLSVAA_					0	0	0		nc|ENSG00000164935|Q9H295-2|DCSTAMP;ENSG00000164935|ENST00000297581|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2883178591728	2	465.286943	928.559333	2.5746	0.0011979	-0.15229	-7.0857E-05	2.4223	0.0011271	465.28734429829257	63.537	1.1502	64.95	64.596	65.746	1.4134					104	36	5	0	0	0	0.11481	1	26732	26732		61.357	0	1	231860000			11846	3805	5945	5970	14347	14347					0.09219528591358994
ISVGLLSVAA	10	Unmodified	_ISVGLLSVAA_					0	0	0		nc|ENSG00000164935|Q9H295-2|DCSTAMP;ENSG00000164935|ENST00000297581|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2879821658134	2	465.286943	928.559333	2.6075	0.0012132	-0.54231	-0.00025233	2.0652	0.00096091	465.28707194913125	62.915	1.0932	64.86	64.597	65.69	1.9444					95	34	5	0	0	0	0.11481	1	26338	26338		61.357	0	1	196070000			11847	3805	5945	5970	14348	14348					0.09219528591358994
ISVGLSFLSL	10	Unmodified	_ISVGLSFLSL_					0	0	0			REV__ENST00000381440.4_1_16:19128639-19128831:+|nuORF	REV__ENST00000381440.4_1_16:19128639-19128831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1397582888603	2	518.307875	1034.6012	2.7008	0.0013998	-0.93034	-0.0004822	1.7705	0.00091764	518.3069188267057	62.741	0.28138	64.685	64.532	64.814	1.9444					14	8	2	0	0	0	0.12412	1	26306	26306		14.838	0	1	877520	+		11848	12776	5946	5971	14349	14349					0.08528084279919312
ISVIPPPK	8	Unmodified	_ISVIPPPK_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	425.7755309939384	2	425.773471	849.53239	1.2125	0.00051625	3.6528	0.0015553	4.8653	0.0020715	425.7753116565973	25.591	0.66942	25.843	25.645	26.314	0.25197					70	21	5	0	0	0	0.88587	1	10642	10642		5.2307	2.6532	1	135690000			11849	5349	5947	5972	14350	14350					0.10160464770842736
ISVIPPPK	8	Unmodified	_ISVIPPPK_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7751342654228	2	425.773471	849.53239	0.59667	0.00025405	3.292	0.0014016	3.8887	0.0016557	425.77511658706504	24.019	0.67031	25.704	25.473	26.143	1.6845					68	21	5	0	0	0	0.89051	2	9983	9983;10208		2.3027	1.6124	1	133380000			11850	5349	5947	5972	14351;14352	14351					0.10160464770842736
ISVLDIPPFL	10	Unmodified	_ISVLDIPPFL_					0	0	0		nc|ENSG00000156687|Q6UXZ4-2|UNC5D;ENSG00000156687|ENST00000404895|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8308593630791	2	557.33135	1112.64815	2.4643	0.0013735	0.92522	0.00051565	3.3896	0.0018891	557.8306587294351	85.229	0.50276	86.388	86.086	86.589	1.159					35	17	3	0	0	0	0.82019	1	35834	35834		10.074	4.8433	1	5223200			11851	3456	5948	5973	14353	14353					0.09632943831024932
ISVLDIPPFL	10	Unmodified	_ISVLDIPPFL_					0	0	0		nc|ENSG00000156687|Q6UXZ4-2|UNC5D;ENSG00000156687|ENST00000404895|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	nc|ENSG00000156687|Q6UXZ4-2|UNC5D	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	557.33135	1112.64815	2.7684	0.0015429	0.33754	0.00018812	3.1059	0.001731	557.8309461758337	84.955	0.44376	86.552	86.188	86.632	1.5962	0.1641	-0.0012955	NaN	10.074	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5830000			11852	3456	5948	5973							0.09632943831024932
ISVLTVEDI	9	Unmodified	_ISVLTVEDI_					0	0	0			REV__tr|A0A7D6VSQ2|A0A7D6VSQ2_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17640PE=4SV=1	REV__tr|A0A7D6VSQ2|A0A7D6VSQ2_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7840453982353	2	494.78169	987.548827	2.9717	0.0014704	1.1033	0.00054589	4.075	0.0020162	494.7820941999604	63.852	0.36802	65.78	65.613	65.981	1.928					28	11	3	0	0	0	0.051699	1	26786	26786		67.344	6.9543	1	4173700	+		11853	15458	5949	5974	14354	14354					0.0545550114627531
ISVQNMMHQKE	11	Unmodified	_ISVQNMMHQKE_					0	0	0		ENST00000567330.1_1_16:75743035-75743521:-|nuORF	ENST00000567330.1_1_16:75743035-75743521:-|nuORF	ENST00000567330.1_1_16:75743035-75743521:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.8858215212822	3	448.884807	1343.63259	2.5315	0.0011363	-0.2657	-0.00011927	2.2658	0.0010171	448.8846201487216	39.882	0.33937	41.192	40.991	41.33	1.3102					24	10	3	0	0	0	0.9945	1	16763	16763		4.1166	0.79699	1	5945700			11854	7365	5950	5975	14355	14355					-0.025480340199919738
ISVQWQWIWDR	11	Unmodified	_ISVQWQWIWDR_					0	0	0		ENST00000453184.2_1_2:90007722-90008108:+|nuORF	ENST00000453184.2_1_2:90007722-90008108:+|nuORF	ENST00000453184.2_1_2:90007722-90008108:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	506.6951782107353	3	506.261371	1515.76228	0.7375	0.00037337	2.7097	0.0013718	3.4472	0.0017452	506.26260505759416	14.164	0.52376	14.164	13.949	14.473	0					42	16	4	0	0	0	0.14606	1	5918	5918		1.0136	0	1	2759900			11855	6625	5951	5976	14356	14356					0.02503226645808354
ISVRVIDPF	9	Unmodified	_ISVRVIDPF_					0	0	0		ENSG00000151005|ENST00000280605|TKTL2	ENSG00000151005|ENST00000280605|TKTL2	ENSG00000151005|ENST00000280605|TKTL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3066284060478	2	523.305667	1044.59678	1.6833	0.00088088	-3.2463	-0.0016988	-1.563	-0.00081795	523.3040221872185	66.245	0.95821	68.134	67.509	68.467	1.8889					54	30	2	0	0	0	0.66839	1	27855	27855		8.5933	0	1	1146300			11856	3276	5952	5977	14357	14357					0.07626619856978323
ISVTSVISV	9	Unmodified	_ISVTSVISV_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	904.5346557497978	1	904.534975	903.527698	1.9788	0.0017899	-1.3038	-0.0011793	0.67497	0.00061053	904.5337312955538	81.93	0.27531	81.93	81.763	82.039	0					10	8	2	0	0	0	0.091139	1	34133	34133		52.268	10.174	1	855190			11857	7736	5953	5978	14358	14358					0.07207535837437717
ISVTSVISV	9	Unmodified	_ISVTSVISV_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	904.5400878787041	1	904.534975	903.527698	2.2885	0.0020701	0.093548	8.4618E-05	2.3821	0.0021547	904.5358258245087	80.511	0.30567	81.762	81.575	81.881	1.2512					16	9	2	0	0	0	0.031324	2	33820	33766;33820		85.357	10.934	1	2109500			11858	7736	5953	5978	14359;14360	14360					0.07207535837437717
ISVTSVISV	9	Unmodified	_ISVTSVISV_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	904.5395995974541	1	904.534975	903.527698	1.0272	0.00092916	0.49356	0.00044644	1.5208	0.0013756	904.535521764233	80.024	0.34237	81.741	81.537	81.879	1.7167					17	10	2	0	0	0	0.042029	1	33532	33532		74.423	16.951	1	1450600			11859	7736	5953	5978	14361	14361					0.07207535837437717
ISVTSVISV	9	Unmodified	_ISVTSVISV_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|269|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	904.534975	903.527698	2.1324	0.0019288	-0.89707	-0.00081143	1.2353	0.0011174	904.5343891019012	81.507	0.30089	81.787	81.636	81.937	0.2802	-0.018001	-0.00077958	NaN	85.357	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625210			11860	7736	5953	5978							0.07207535837437717
ISVVTPSLIME	11	Unmodified	_ISVVTPSLIME_					0	0	0			REV__ENSG00000138160|ENST00000260731|KIF11	REV__ENSG00000138160|ENST00000260731|KIF11	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.8916503787041	3	396.889664	1187.64716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.445	1	57.86	57.36	58.36	1.4145								0	0	0	0.63774	1	23655	23655		4.1166	0.79699	1		+		11861	10047	5954	5979	14362	14362					0.06084361399803129
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.9271728396416	4	324.927655	1295.68151	-2.0505	-0.00066628	0.74468	0.00024197	-1.3059	-0.00042431	324.9278691784226	42.09	0.68799	42.09	41.821	42.509	0					68	21	4	0	0	0	0.70123	3	17672	17580;17672;17722		18.373	11.336	1	25817000			11862	6731	5955	5980	14363;14364;14365	14364					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9031555056572	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.642	1	43.642	43.142	44.142	0								0	0	0	0.32683	1	18268	18268		32.037	24.191	1				11863	6731	5955	5980	14366	14366					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9036132693291	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.736	1	43.736	43.236	44.236	0								0	0	0	0.22102	1	18306	18306		37.075	23.54	1				11864	6731	5955	5980	14367	14367					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9032775759697	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.832	1	43.832	43.332	44.332	0								0	0	0	0.36056	1	18345	18345		30.703	22.857	1				11865	6731	5955	5980	14368	14368					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9033996462822	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.933	1	43.933	43.433	44.433	0								0	0	0	0.22102	1	18386	18386		37.075	26.009	1				11866	6731	5955	5980	14369	14369					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9047119021416	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.697	1	44.697	44.197	45.197	0								0	0	0	0.25054	1	18705	18705		35.612	5.2579	1				11867	6731	5955	5980	14370	14370					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9015075564384	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.89	1	112.89	112.39	113.39	0								0	0	0	0.6165	1	48791	48791		20.581	2.7178	1				11868	6731	5955	5980	14371	14371					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	648.8457519412041	2	648.848033	1295.68151	1.6673	0.0010818	-0.35582	-0.00023087	1.3115	0.00085093	648.8474818183794	41.674	0.52269	41.991	41.67	42.192	0.31683					20	16	2	0	0	0	0.44353	1	17511	17511		29.082	14.676	1	665120			11869	6731	5955	5980	14372	14372					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9027587771416	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.76	1	43.086	42.586	43.586	1.3254								0	0	0	0.22102	1	17506	17506		37.075	1.0788	1				11870	6731	5955	5980	14373	14373					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9027282595634	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.158	1	43.498	42.998	43.998	1.3399								0	0	0	0.22102	1	17676	17676		37.075	29.229	1				11871	6731	5955	5980	14374	14374					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9035827517509	3	432.901114	1295.68151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.652	1	43.992	43.492	44.492	1.3399								0	0	0	0.22102	1	17878	17878		37.075	24.219	1				11872	6731	5955	5980	14375	14375					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.8467895388603	2	648.848033	1295.68151	1.5225	0.00098788	-2.9465	-0.0019119	-1.424	-0.00092398	648.8458123106811	39.219	0.27703	41.056	40.944	41.221	1.8366					14	8	2	0	0	0	0.74074	1	16424	16424		13.906	5.7505	1	369010			11873	6731	5955	5980	14376	14376					0.04549990393593362
ISWFLHPFHL	10	Unmodified	_ISWFLHPFHL_					0	0	0		ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	ENST00000469911.1_1_3:182328694-182329198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.9030334353447	3	432.901114	1295.68151	1.5797	0.00068384	-2.5984	-0.0011249	-1.0188	-0.00044103	432.90023579439526	39.257	0.77197	41.094	40.817	41.589	1.8366					75	24	5	0	0	0	0.42124	1	16543	16543		32.037	8.0733	1	25361000			11874	6731	5955	5980	14377	14377					0.04549990393593362
ISWKSRRRWF	10	Unmodified	_ISWKSRRRWF_					0	0	0		ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	474.2340270876884	3	474.60195	1420.78402	1.231	0.00058421	-1.7983	-0.00085346	-0.5673	-0.00026924	474.60101092352977	27.522	0.43257	28.801	28.657	29.09	1.2789					26	13	3	0	0	0	0.12561	1	11547	11547		0.15932	0.064481	1	529610			11875	7349	5956	5981	14378	14378					0.09046076185063612
ISWKSRRRWFQ	11	Unmodified	_ISWKSRRRWFQ_					0	0	0		ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6267578005791	3	517.288143	1548.8426	3.1127	0.0016102	2.9691	0.0015359	6.0818	0.0031461	517.2895215686157	62.463	2.0143	63.877	62.892	64.906	1.4134					162	64	4	0	0	0	1.0362	1	26437	26437		1.3296	0.21989	1	2470900			11876	7349	5957	5982	14379	14379					0.09013132759537257
ISWKSRRRWFQ	11	Unmodified	_ISWKSRRRWFQ_					0	0	0		ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	ENST00000564578.5_1_16:75665478-75665638:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	517.288143	1548.8426	2.8519	0.0014753	5.2108	0.0026955	8.0628	0.0041708	517.6248197926932	61.577	2.0387	63.534	62.443	64.482	1.9571	-0.17133	0.0017197	NaN	1.3296	128	65	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2182500			11877	7349	5957	5982							0.09013132759537257
ISWVKIMV	8	Unmodified	_ISWVKIMV_					0	0	0		ENST00000495200.1_1_2:198365246-198365531:+|nuORF	ENST00000495200.1_1_2:198365246-198365531:+|nuORF	ENST00000495200.1_1_2:198365246-198365531:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2875854372978	2	488.288431	974.562309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.606	1	51.583	51.083	52.083	1.9772								0	0	0	1.0178	1	20778	20778		5.7604	0.52976	1				11878	6943	5958	5983	14380	14380					0.07401080444537911
ISWYLAKL	8	Unmodified	_ISWYLAKL_					0	0	0			REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.7916442751884	2	497.292028	992.569503	1.4328	0.00071254	1.1251	0.00055952	2.558	0.0012721	497.2923249826557	48.46	0.21328	49.848	49.712	49.925	1.388					9	6	2	0	0	0	2.3239	1	20309	20309		2.3027	0	1	1062500	+		11879	9672	5959	5984	14381	14381					0.0729213631661878
ISYEKKLEVI	10	Unmodified	_ISYEKKLEVI_					0	0	0			REV__tr|A0A553SGK0|A0A553SGK0_NIACIPhosphateABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11020PE=4SV=1	REV__tr|A0A553SGK0|A0A553SGK0_NIACIPhosphateABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11020PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3607055544853	2	611.358096	1220.70164	1.9698	0.0012043	-2.1311	-0.0013029	-0.16126	-9.859E-05	611.3566402316326	77.022	2.1695	77.338	76.479	78.648	0.31653					134	68	3	0	0	0	0.846	1	32338	32338		7.2892	0.56607	1	3044900	+		11880	14753	5960	5985	14382	14382					0.1001169654291516
ISYLWKII	8	Unmodified	_ISYLWKII_					0	0	0			REV__ENSG00000169122|ENST00000519262|FAM110B	REV__ENSG00000169122|ENST00000519262|FAM110B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.6238281130791	2	518.315503	1034.61645	2.5053	0.0012986	0.40468	0.00020975	2.91	0.0015083	518.3173235280404	47.654	0.34767	49.036	48.825	49.173	1.3825					23	10	3	0	0	0	2.3239	1	19876	19876		9.3474	0	1	2082400	+		11881	10931	5961	5986	14383	14383					0.10052995867749814
ISYSVDKI	8	Unmodified	_ISYSVDKI_					0	0	0		ENST00000550479.1_1_12:104332030-104335334:+|nuORF	ENST00000550479.1_1_12:104332030-104335334:+|nuORF	ENST00000550479.1_1_12:104332030-104335334:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1454955935478	2	462.755475	923.496398	2.1134	0.00097798	-3.164	-0.0014642	-1.0506	-0.00048618	462.75380647779275	79.221	0.34185	80.956	80.814	81.155	1.735					18	10	2	0	0	0	2.3239	1	33206	33206		5.2307	0.90143	1	986150			11882	7262	5962	5987	14384	14384					0.03158962803343002
ISYVYSGYAPL	11	Unmodified	_ISYVYSGYAPL_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8140746951103	2	616.813522	1231.61249	1.452	0.0008956	2.5895	0.0015972	4.0414	0.0024928	616.8149411928274	84.3	0.37166	85.459	85.251	85.622	1.159					25	11	3	0	0	0	0.37492	1	35343	35343		27.629	3.6082	1	3416500			11883	2890	5963	5988	14385	14385					0.005948615833858639
ISYVYSGYAPL	11	Unmodified	_ISYVYSGYAPL_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	616.813522	1231.61249	1.6065	0.00099091	2.3131	0.0014268	3.9196	0.0024177	616.8154895450856	83.795	0.4008	85.433	85.253	85.653	1.6379	-0.013442	-0.0001243	NaN	27.629	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3752900			11884	2890	5963	5988							0.005948615833858639
ISYYTFYNGF	10	Unmodified	_ISYYTFYNGF_					0	0	0			REV__ENSG00000172244|ENST00000306862|C5orf34	REV__ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.7850219607353	2	637.790047	1273.56554	1.2433	0.00079299	-1.2034	-0.00076752	0.039938	2.5472E-05	637.7889190900208	46.29	0.52705	47.665	47.398	47.925	1.3751					39	16	3	0	0	0	0.846	1	19322	19322		7.2892	0	1	2938600	+		11885	11060	5964	5989	14386	14386					-0.06029997967766576
ISYYTFYNGF	10	Unmodified	_ISYYTFYNGF_					0	0	0			REV__ENSG00000172244|ENST00000306862|C5orf34	REV__ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.7896606326103	2	637.790047	1273.56554	0.93698	0.0005976	-0.43649	-0.00027839	0.50049	0.00031921	637.7895583224114	45.852	0.6203	47.822	47.536	48.156	1.9703					42	19	3	0	0	0	0.846	1	19158	19158		7.2892	0	1	2314500	+		11886	11060	5964	5989	14387	14387					-0.06029997967766576
ITANLTSSLL	10	Unmodified	_ITANLTSSLL_					0	0	0		nc|ENSG00000160323|Q76LX8-3|ADAMTS13;ENSG00000160323|ENST00000355699|ADAMTS13;nc|ENSG00000160323|Q76LX8|ADAMTS13;ENST00000485925.5_1_9:136279761-136305516:+|nuORF	nc|ENSG00000160323|Q76LX8-3|ADAMTS13	nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8017455935478	2	516.800414	1031.58628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.275	1	74.085	73.585	74.585	1.8101								0	0	0	0.52953	1	30324	30324		24.021	8.1734	1				11887	3555	5965	5990	14388	14388					0.07174592411911362
ITAVLTKII	9	Unmodified	_ITAVLTKII_					0	0	0		ENSG00000103932|ENST00000304330|RPAP1;nc|ENSG00000103932|Q9BWH6-2|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.3295165896416	2	486.328611	970.642668	2.435	0.0011842	-0.54588	-0.00026548	1.8891	0.00091873	486.3281906711514	71.614	0.38066	71.938	71.751	72.132	0.32359					24	11	3	0	0	0	0.076627	2	29997	29946;29997		57.471	1.2943	1	1695700			11888	1444	5966	5991	14389;14390	14390					0.15617265039213635
ITAVLTKII	9	Unmodified	_ITAVLTKII_					0	0	0		ENSG00000103932|ENST00000304330|RPAP1;nc|ENSG00000103932|Q9BWH6-2|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3286315798759	2	486.328611	970.642668	3.0498	0.0014832	-0.95918	-0.00046648	2.0906	0.0010167	486.328080901799	70.437	0.54475	71.79	71.584	72.129	1.3536					35	16	3	0	0	0	0.076627	1	29518	29518		57.471	1.2943	1	4222200			11889	1444	5966	5991	14391	14391					0.15617265039213635
ITAVLTKII	9	Unmodified	_ITAVLTKII_					0	0	0		ENSG00000103932|ENST00000304330|RPAP1;nc|ENSG00000103932|Q9BWH6-2|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3289672732353	2	486.328611	970.642668	2.7649	0.0013446	-1.5746	-0.0007658	1.1902	0.00057884	486.32769502734794	69.862	0.63615	71.7	71.5	72.136	1.8378					34	19	3	0	0	0	0.10294	1	29285	29285		48.346	0.59716	1	3362000			11890	1444	5966	5991	14392	14392					0.15617265039213635
ITDAGLQLVV	10	Unmodified	_ITDAGLQLVV_					0	0	0			REV__nc|ENSG00000147099|Q9BY41-4|HDAC8	REV__nc|ENSG00000147099|Q9BY41-4|HDAC8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.7565185427666	2	514.802957	1027.59136	1.871	0.00096318	-1.4437	-0.00074324	0.42723	0.00021994	514.8018874717498	79.091	0.21674	79.392	79.279	79.496	0.30047					10	6	2	0	0	0	0.12302	1	33094	33094		32.305	18.798	1	503190	+		11891	10320	5967	5992	14393	14393					0.0786689627452688
ITDDLHFYV	9	Unmodified	_ITDDLHFYV_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ZFR-SND1|1|fusion	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.7797119021416	2	561.776939	1121.53933	1.4684	0.00082492	-0.77127	-0.00043328	0.69714	0.00039164	561.7766428977612	57.698	0.25471	57.698	57.626	57.881	0					11	7	2	0	0	0	0.22519	1	24104	24104		30.225	15.387	1	492150			11892	4985	5968	5993	14394	14394					-0.016582671392370685
ITDLISEL	8	Unmodified	_ITDLISEL_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENSG00000005075|ENST00000292614|POLR2J;ENST00000427076.5_1_7:44053248-44058742:-|nuORF;ENST00000326391.6_1_7:44054045-44058742:-|nuORF	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2570068240166	2	452.255308	902.496064	2.444	0.0011053	0.32019	0.00014481	2.7642	0.0012501	452.25539431013647	68.467	0.4566	69.845	69.583	70.04	1.3778					34	14	3	0	0	0	0.18696	1	28687	28687		81.864	0	1	9116400			11893	5298	5969	5994	14395	14395					0.040915430834729705
ITDLISEL	8	Unmodified	_ITDLISEL_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENSG00000005075|ENST00000292614|POLR2J;ENST00000427076.5_1_7:44053248-44058742:-|nuORF;ENST00000326391.6_1_7:44054045-44058742:-|nuORF	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	903.5059692263603	1	903.50334	902.496064	1.933	0.0017465	1.2706	0.001148	3.2036	0.0028945	903.5041121033892	68.433	0.51926	69.811	69.553	70.072	1.3778					50	16	4	0	0	0	0.11802	2	28731	28731;28788		123.1	0	1	34034000			11894	5298	5969	5994	14396;14397	14396					0.040915430834729705
ITDLLKIERP	10	Unmodified	_ITDLLKIERP_					0	0	0		tr|A0A553SUE9|A0A553SUE9_NIACINitronatemonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_06895PE=4SV=1	tr|A0A553SUE9|A0A553SUE9_NIACINitronatemonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_06895PE=4SV=1	tr|A0A553SUE9|A0A553SUE9_NIACINitronatemonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_06895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3651611208916	2	599.363713	1196.71287	1.9563	0.0011725	-0.43088	-0.00025825	1.5254	0.00091426	599.3634741210094	68.909	0.59083	68.909	68.612	69.202	0					64	18	5	0	0	0	0.55653	1	28782	28782		24.991	1.2012	1	18123000			11895	16688	5970	5995	14398	14398					0.12238518637036577
ITEIKEIKYK	10	Unmodified	_ITEIKEIKYK_					0	0	0			REV__ENSG00000094975|ENST00000263688|SUCO	REV__ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2556335330009	3	422.255223	1263.74384	2.9484	0.001245	-0.57583	-0.00024315	2.3726	0.0010018	422.5876503076231	91.786	0.90343	91.976	91.4	92.303	0.19041					96	27	5	0	0	0	0.89803	1	38473	38473		0.62683	0	1	1295800	+		11896	8924	5971	5996	14399	14399					0.12251671951253229
ITELQKNGR	9	Unmodified	_ITELQKNGR_					0	0	0		ENST00000441868.2_1_6:135219409-135219799:+|nuORF	ENST00000441868.2_1_6:135219409-135219799:+|nuORF	ENST00000441868.2_1_6:135219409-135219799:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.3024780154228	2	529.80128	1057.58801	1.869	0.00099022	-3.6349	-0.0019258	-1.7659	-0.00093558	529.799717566967	48.637	0.28072	48.968	48.821	49.101	0.33034					18	8	3	0	0	0	0.22154	1	20385	20385		30.637	10.183	1	1145200			11897	6558	5972	5997	14400	14400					0.06151646220496332
ITETAPCIQF	10	Unmodified	_ITETAPCIQF_					0	0	0			REV__ABI3BP|p.A266Kfs*13|1|0.02|ENSG00000154175|chr3:100875550-100875551|-/TT|frameshift_variant	REV__ABI3BP|p.A266Kfs*13|1|0.02|ENSG00000154175|chr3:100875550-100875551|-/TT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.2724487185478	2	561.778625	1121.5427	1.3159	0.00073927	4.2026	0.0023609	5.5185	0.0031002	561.7819259424622	38.853	0.25861	40.69	40.558	40.817	1.8366					11	7	2	0	0	0	0.12525	1	16245	16245		6.7232	0.99131	1	512120	+		11898	8075	5973	5998	14401	14401					-0.013213403569125148
ITEVLVTLI	9	Unmodified	_ITEVLVTLI_					0	0	0			REV__tr|A0A553SKU3|A0A553SKU3_NIACIStageIIIsporulationproteinADOS=NialliacirculansOX=1397GN=spoIIIADPE=4SV=1	REV__tr|A0A553SKU3|A0A553SKU3_NIACIStageIIIsporulationproteinADOS=NialliacirculansOX=1397GN=spoIIIADPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8183471560478	2	500.818076	999.621598	3.1509	0.001578	-1.1407	-0.00057127	2.0102	0.0010068	500.8173662170471	86.18	0.506	86.432	86.193	86.699	0.25227					39	16	3	0	0	0	0.1735	1	36131	36131		36.044	3.9272	1	4914000	+		11899	14966	5974	5999	14402	14402					0.12177254939717841
ITFDSTEIL	9	Unmodified	_ITFDSTEIL_					0	0	0			REV__tr|A0A553SK23|A0A553SK23_NIACIFormamidopyrimidine-DNAglycosylaseOS=NialliacirculansOX=1397GN=mutMPE=3SV=1	REV__tr|A0A553SK23|A0A553SK23_NIACIFormamidopyrimidine-DNAglycosylaseOS=NialliacirculansOX=1397GN=mutMPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1038.537158191204	1	1038.53537	1037.52809	1.6068	0.0016687	1.7668	0.0018349	3.3737	0.0035037	1038.5375630189676	83.343	0.28519	84.531	84.356	84.642	1.1879					13	8	2	0	0	0	0.051699	1	34962	34962		67.344	25.249	1	1847200	+		11900	14930	5975	6000	14403	14403					0.010829107666040727
ITFDSTEIL	9	Unmodified	_ITFDSTEIL_					0	0	0			REV__tr|A0A553SK23|A0A553SK23_NIACIFormamidopyrimidine-DNAglycosylaseOS=NialliacirculansOX=1397GN=mutMPE=3SV=1	REV__tr|A0A553SK23|A0A553SK23_NIACIFormamidopyrimidine-DNAglycosylaseOS=NialliacirculansOX=1397GN=mutMPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1038.53537	1037.52809	1.6068	0.0016687	1.7668	0.0018349	3.3737	0.0035037	1038.5375630189676	83.343	0.28519	84.531	84.356	84.642	1.1879	0.039044	0.00032481	NaN	67.344	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1847200	+		11901	14930	5975	6000							0.010829107666040727
ITFFIRWILYI	11	Unmodified	_ITFFIRWILYI_					0	0	0			REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	742.4380981326103	2	742.936848	1483.85914	2.4697	0.0018348	0.65704	0.00048814	3.1267	0.0023229	742.936976549268	105.79	0.073112	105.95	105.91	105.98	0.15859					5	3	2	0	0	0	0.14606	1	45150	45150		0.35063	0.043601	1	38620000	+		11902	15582	5976	6001	14404	14404					0.13656820872938624
ITFHLQNFR	9	Unmodified	_ITFHLQNFR_					0	0	0		ENSG00000148386|ENST00000619315|LCN9;nc|ENSG00000148386|Q8WX39|LCN9	ENSG00000148386|ENST00000619315|LCN9	ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3201171755791	2	588.31964	1174.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.849	1	58.172	57.672	58.672	0.32298								0	0	0	0.41514	1	24253	24253		7.2892	1.5574	1				11903	3207	5977	6002	14405	14405					0.0443994283707525
ITFLKTDTR	9	Unmodified	_ITFLKTDTR_					0	0	0		tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.3567993044853	2	547.813856	1093.61316	4.6559	0.0025505	3.7049	0.0020296	8.3607	0.0045801	547.8163080319104	89.132	0.38055	90.537	90.264	90.645	1.4045					23	11	3	0	0	0	0.071872	1	37477	37477		37.974	1.847	1	1289700			11904	16709	5978	6003	14406	14406					0.07009701023048365
ITFSLVWVI	9	Unmodified	_ITFSLVWVI_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.7834960818291	2	539.320786	1076.62702	2.112	0.001139	-2.3809	-0.0012841	-0.26899	-0.00014507	539.3183144067349	64.602	0.5387	66.53	66.325	66.864	1.928					28	16	3	0	0	0	0.11333	1	27215	27215		8.5933	0	1	860780	+		11905	14461	5979	6004	14407	14407					0.09176978522191348
ITFYFETY	8	Unmodified	_ITFYFETY_					0	0	0			REV__tr|A0A7D6ZZS2|A0A7D6ZZS2_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07315PE=4SV=1	REV__tr|A0A7D6ZZS2|A0A7D6ZZS2_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07315PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	542.2560912966728	2	542.255308	1082.49606	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.575	1	42.575	42.075	43.075	0								0	0	0	1.0178	1	17817	17817		8.5933	0.68312	1		+		11906	15800	5980	6005	14408	14408					-0.0418845691651768
ITGFFPFFL	9	Unmodified	_ITGFFPFFL_					0	0	0		ENSG00000170961|ENST00000303924|HAS2	ENSG00000170961|ENST00000303924|HAS2	ENSG00000170961|ENST00000303924|HAS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	544.2755004763603	2	544.794404	1087.57425	2.354	0.0012824	-1.3101	-0.00071373	1.0439	0.00056871	544.7934501062695	75.875	0.30336	77.169	77.038	77.341	1.2938					19	9	3	0	0	0	0.084274	1	31792	31792		23.148	2.2772	1	1129700			11907	4171	5981	6006	14409	14409					0.033970204593970266
ITGLRYRI	8	Unmodified	_ITGLRYRI_					0	0	0			REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	REV__nc|ENSG00000142910|Q9GZM7-3|TINAGL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	495.7814819216728	2	496.306001	990.597449	1.4606	0.00072488	0.79262	0.00039338	2.2532	0.0011183	496.30615238922167	79.606	0.58893	79.606	79.206	79.795	0					28	18	3	0	0	0	2.3239	1	33201	33201		13.508	4.1604	1	1078800	+		11908	10191	5982	6007	14410	14410					0.10177459296698999
ITGPLIRIL	9	Unmodified	_ITGPLIRIL_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.3357421755791	2	498.334227	994.653902	2.6239	0.0013076	0.17077	8.5098E-05	2.7947	0.0013927	498.3342913283745	64.037	0.37511	65.965	65.764	66.139	1.928					27	11	3	0	0	0	0.11643	1	26867	26867		43.858	11.553	1	2271100			11909	1120	5983	6008	14411	14411					0.15636087133384535
ITGPLIRIL	9	Unmodified	_ITGPLIRIL_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	498.334227	994.653902	3.1105	0.0015501	-0.2707	-0.0001349	2.8398	0.0014152	498.3342488316564	64.59	0.3691	65.997	65.801	66.17	1.4071	0.015948	-0.00022357	NaN	43.858	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2626100			11910	1120	5983	6008							0.15636087133384535
ITHHRYEFFKF	11	Unmodified	_ITHHRYEFFKF_					0	0	0		tr|A0A7D6ZNX4|A0A7D6ZNX4_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18025PE=4SV=1	tr|A0A7D6ZNX4|A0A7D6ZNX4_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18025PE=4SV=1	tr|A0A7D6ZNX4|A0A7D6ZNX4_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18025PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	762.8908569216728	2	762.890961	1523.76737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.43	1	102.61	102.11	103.11	0.18066								0	0	0	0.63775	1	43084	43084		2.9952	1.6657	1				11911	17119	5984	6009	14412	14412					0.02643530508407821
ITIATNELLTK	11	Unmodified	_ITIATNELLTK_					0	0	0			REV__ENST00000587155.1_1_19:12812547-12813748:-|nuORF	REV__ENST00000587155.1_1_19:12812547-12813748:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2441894412041	3	406.243094	1215.70745	0.34456	0.00013997	1.6639	0.00067593	2.0084	0.0008159	406.24381148676605	40.596	0.30387	40.596	40.427	40.731	0					22	9	3	0	0	0	0.54794	1	16977	16977		18.34	6.1121	1	2831300	+		11912	8829	5985	6010	14413	14413					0.1082279505455972
ITIEKKEDIK	10	Unmodified	_ITIEKKEDIK_					0	0	0			REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2442504763603	3	406.243094	1215.70745	1.8157	0.00073763	0.66729	0.00027108	2.483	0.0010087	406.24345348475487	40.051	0.3121	40.364	40.196	40.508	0.31263					26	9	4	0	0	0	0.81347	1	16886	16886		6.6235	1.9075	1	3638300	+		11913	15414	5986	6011	14414	14414					0.1082279505455972
ITIEKKEDIK	10	Unmodified	_ITIEKKEDIK_					0	0	0			REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8619262576103	2	608.861003	1215.70745	1.7102	0.0010413	-1.3844	-0.00084292	0.32576	0.00019834	608.8600889584147	38.618	0.26431	39.915	39.774	40.038	1.2961					20	8	3	0	0	0	0.28421	1	16197	16197		40.239	7.4535	1	2000600	+		11914	15414	5986	6011	14415	14415					0.1082279505455972
ITIEKKEDIK	10	Unmodified	_ITIEKKEDIK_					0	0	0			REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8620483279228	2	608.861003	1215.70745	0.88106	0.00053644	-0.54918	-0.00033437	0.33188	0.00020207	608.8608996275033	37.982	0.20879	39.802	39.701	39.91	1.8202					16	6	3	0	0	0	0.34658	1	15943	15943		36.506	1.5741	1	2272700	+		11915	15414	5986	6011	14416	14416					0.1082279505455972
ITIEKKEDIK	10	Unmodified	_ITIEKKEDIK_					0	0	0			REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	REV__tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	608.861003	1215.70745	1.7102	0.0010413	-1.3844	-0.00084292	0.32576	0.00019834	608.8600889584147	38.618	0.26431	39.915	39.774	40.038	1.2961	0.056113	-0.00049826	NaN	40.239	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2000600	+		11916	15414	5986	6011							0.1082279505455972
ITIFKAEK	8	Unmodified	_ITIFKAEK_					0	0	0			REV__tr|A0A553SRD4|A0A553SRD4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00855PE=4SV=1	REV__tr|A0A553SRD4|A0A553SRD4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00855PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	475.2892639040947	2	475.289485	948.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.13	103.63	104.63	0.059502								0	0	0	1.0178	1	43816	43816		1.6526	0.96225	1		+		11917	15156	5987	6012	14417	14417					0.08807832453999254
ITILVIFYTL	10	Unmodified	_ITILVIFYTL_					0	0	0			REV__chr3:195729739-195735191|163|11.25|0.0|20.1|+|0|TE_info:L2a,L2a_dup40553,L2,LINE,acceptor,+,195735191,195735890|MUC20-OT1,None|4	REV__chr3:195729739-195735191|163|11.25|0.0|20.1|+|0|TE_info:L2a,L2a_dup40553,L2,LINE,acceptor,+,195735191,195735890|MUC20-OT1,None|4	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2516662478447	3	399.249409	1194.7264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.404	1	77.698	77.198	78.198	1.2938								0	0	0	0.66161	1	32076	32076		1.7423	0.52744	1		+		11918	8318	5988	6013	14418	14418					0.13682376416272746
ITIRQLRDIFL	11	Unmodified	_ITIRQLRDIFL_					0	0	0			REV__ENST00000494490.1_3_15:57999305-58006874:+|nuORF	REV__ENST00000494490.1_3_15:57999305-58006874:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	694.4241821169853	2	694.424636	1386.83472	1.4089	0.00097839	-2.4372	-0.0016925	-1.0283	-0.00071408	694.4227351887042	84.433	0.89345	85.592	85.224	86.118	1.159					35	28	2	0	0	0	1.0362	1	35455	35455		1.3295	0.13619	1	3413400	+		11919	11973	5989	6014	14419	14419					0.15677560719404937
ITISISSLGV	10	Unmodified	_ITISISSLGV_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2976867556572	2	495.297507	988.580462	1.6379	0.00081124	-0.80091	-0.00039669	0.83697	0.00041455	495.2971691971563	92.788	1.4271	92.788	92.473	93.9	0					108	45	5	0	0	0	0.62746	2	38917	38917;38980		21.747	4.8044	1	84094000	+		11920	11501	5990	6015	14420;14421	14420					0.08571493900251426
ITISISSLGV	10	Unmodified	_ITISISSLGV_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2987853884697	2	495.297507	988.580462	4.1473	0.0020541	-2.572	-0.0012739	1.5753	0.00078024	495.2963147819647	91.746	1.1979	92.682	92.275	93.473	0.93623					117	37	5	0	0	0	0.62746	2	38795	38795;38865		21.747	4.8044	1	134660000	+		11921	11501	5990	6015	14422;14423	14422					0.08571493900251426
ITISISSLGV	10	Unmodified	_ITISISSLGV_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2993957400322	2	495.297507	988.580462	3.3693	0.0016688	-1.8685	-0.00092548	1.5007	0.00074331	495.2966298184994	91.335	1.2322	92.701	92.342	93.574	1.366					120	38	5	0	0	0	0.62746	1	38622	38622		21.747	4.8044	1	125790000	+		11922	11501	5990	6015	14424	14424					0.08571493900251426
ITIWIFGSL	9	Unmodified	_ITIWIFGSL_					0	0	0		ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3070556521416	2	525.305136	1048.59572	2.1291	0.0011184	-3.2614	-0.0017132	-1.1323	-0.00059482	525.3055304290134	61.901	0.24807	62.231	62.105	62.353	0.32974					11	7	2	0	0	0	0.19075	1	25953	25953		34.102	5.0209	1	622010			11923	2086	5991	6016	14425	14425					0.07336405488103992
ITIWIFGSL	9	Unmodified	_ITIWIFGSL_					0	0	0		ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	ENSG00000119820|ENST00000238831|YIPF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3072997927666	2	525.305136	1048.59572	3.2089	0.0016857	0.77132	0.00040518	3.9803	0.0020908	525.3077857528662	60.155	0.28387	62.12	61.915	62.199	1.9653					14	8	3	0	0	0	0.076627	1	25240	25240		57.471	2.6978	1	2036600			11924	2086	5991	6016	14426	14426					0.07336405488103992
ITKELREVRIP	11	Unmodified	_ITKELREVRIP_					0	0	0			REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.4599487185478	4	339.210773	1352.81398	-1.462	-0.00049592	-3.2114	-0.0010894	-4.6734	-0.0015853	339.20913329542435	44.201	1.2612	44.201	43.333	44.594	0					102	39	4	0	0	0	1.0365	1	18469	18469		1.2148	0.20126	1	1727100	+		11925	15845	5992	6017	14427	14427					0.15168970339755106
ITKELREVRIP	11	Unmodified	_ITKELREVRIP_					0	0	0			REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	339.210773	1352.81398	0.37941	0.0001287	-5.0452	-0.0017114	-4.6658	-0.0015827	339.4601276944191	42.864	0.34777	44.204	44.077	44.425	1.3399	0.0018081	-0.0018409	NaN	1.2148	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549880	+		11926	15845	5992	6017							0.15168970339755106
ITKLEWSLVVI	11	Unmodified	_ITKLEWSLVVI_					0	0	0			REV__ENST00000523731.5_1_8:95866045-95866087:+|nuORF	REV__ENST00000523731.5_1_8:95866045-95866087:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	651.6565429568291	2	650.897389	1299.78022	2.4437	0.0015906	-1.8706	-0.0012176	0.57309	0.00037302	650.8960579864232	82.504	0.79978	82.504	82.308	83.107	0					32	25	2	0	0	0	0.14592	1	34367	34367		15.248	8.1468	1	1256400	+		11927	13645	5993	6018	14428	14428					0.1423254884796279
ITKLEWSLVVI	11	Unmodified	_ITKLEWSLVVI_					0	0	0			REV__ENST00000523731.5_1_8:95866045-95866087:+|nuORF	REV__ENST00000523731.5_1_8:95866045-95866087:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	651.6559326052666	2	650.897389	1299.78022	2.1021	0.0013683	-1.3214	-0.0008601	0.7807	0.00050816	650.8965164597064	81.978	1.1956	82.258	82.12	83.316	0.2802					62	38	2	0	0	0	0.14606	1	34572	34572		3.8763	0.88109	1	1624900	+		11928	13645	5993	6018	14429	14429					0.1423254884796279
ITKRRKVKKPR	11	Unmodified	_ITKRRKVKKPR_					0	0	0			REV__ENSG00000135540|ENST00000343505|NHSL1	REV__ENSG00000135540|ENST00000343505|NHSL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4827148318291	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.38	1	114.38	113.88	114.88	0								0	0	0	0.63775	1	49384	49384		2.9952	2.6882	1		+		11929	9946	5994	6019	14430	14430					0.25855459587046425
ITKRRKVKKPR	11	Unmodified	_ITKRRKVKKPR_					0	0	0			REV__ENSG00000135540|ENST00000343505|NHSL1	REV__ENSG00000135540|ENST00000343505|NHSL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	705.4850952029228	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.71	1	112.88	112.38	113.38	0.16914								0	0	0	0.63775	1	48892	48892		1.3295	1.3295	1		+		11930	9946	5994	6019	14431	14431					0.25855459587046425
ITLILLGKY	9	Unmodified	_ITLILLGKY_					0	0	0		tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2272827029228	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.44	1	104.44	103.94	104.94	0								0	0	0	0.42693	1	44072	44072		0.23584	0	1				11931	16779	5995	6020	14432	14432					0.14329551556306797
ITLKERLDHL	10	Unmodified	_ITLKERLDHL_					0	0	0			REV__ENSG00000023839|ENST00000647814|ABCC2	REV__ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2455627322197	3	413.24695	1236.71902	1.5432	0.00063772	2.7186	0.0011235	4.2618	0.0017612	413.24750408726896	33.878	0.33362	34.175	33.994	34.327	0.29701					19	10	2	0	0	0	0.88508	1	14244	14244		3.0723	0.077021	1	778430	+		11932	8565	5996	6021	14433	14433					0.1101303686857591
ITLRTWKKFVK	11	Unmodified	_ITLRTWKKFVK_					0	0	0		ENSG00000163617|ENST00000295878|CCDC191	ENSG00000163617|ENST00000295878|CCDC191	ENSG00000163617|ENST00000295878|CCDC191	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.7340881228447	4	355.726324	1418.87619	2.0687	0.0007359	-1.6723	-0.00059489	0.3964	0.00014101	355.72604141355356	72.779	0.65485	74.109	73.883	74.537	1.3297					30	20	3	0	0	0	0.14606	1	30649	30649		0.40827	0.31342	1	417820			11933	3702	5997	6022	14434	14434					0.18350741478707278
ITLTQSAVDK	10	Unmodified	_ITLTQSAVDK_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.2043640017509	3	359.20464	1074.59209	-0.35131	-0.00012619	-1.3008	-0.00046725	-1.6521	-0.00059344	359.2040100328589	10.224	0.12522	10.969	10.888	11.014	0.74462					5	3	2	0	0	0	0.8325	1	4262	4262		5.0475	0.64137	1	253230	+		11934	11309	5998	6023	14435	14435					0.057776909235599305
ITLTQSAVDK	10	Unmodified	_ITLTQSAVDK_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	359.20464	1074.59209	-1.5949	-0.00057288	-0.68729	-0.00024688	-2.2821	-0.00081975	359.2044912131604	10.29	0.15496	10.941	10.861	11.016	0.65058	-0.01411	0.00025519	NaN	5.0475	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345170	+		11935	11309	5998	6023							0.057776909235599305
ITLTQSAVDK	10	Unmodified	_ITLTQSAVDK_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	359.20464	1074.59209	-0.35131	-0.00012619	-1.3008	-0.00046725	-1.6521	-0.00059344	359.2040100328589	10.224	0.12522	10.969	10.888	11.014	0.74462	0.01411	-0.00040593	NaN	5.0475	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	253230	+		11936	11309	5998	6023							0.057776909235599305
ITMSLTEIS	9	Unmodified	_ITMSLTEIS_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7600280642509	2	497.759901	993.505248	1.7522	0.00087219	1.5567	0.00077484	3.3089	0.001647	497.7604494888613	51.4	0.30875	51.4	51.23	51.539	0					16	9	2	0	0	0	0.19075	1	21433	21433		34.102	1.9855	1	1278200			11937	5356	5999	6024	14436	14436					0.00823568377495576
ITNLAANRVA	10	Unmodified	_ITNLAANRVA_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2070800662041	3	348.204974	1041.59309	0.35939	0.00012514	2.8561	0.00099452	3.2155	0.0011197	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.88916	1	12748	12748		2.6312	0.13275	1	7605500	+		11938	11147	6000	6025	14437	14437					0.073959500831279
ITNNLKKI	8	Unmodified	_ITNNLKKI_					0	0	0			REV__tr|A0A7D7A507|A0A7D7A507_9CLOTAcyl-CoAthioesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_04100PE=3SV=1	REV__tr|A0A7D7A507|A0A7D7A507_9CLOTAcyl-CoAthioesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_04100PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	472.7745544314384	2	472.300384	942.586216	2.3789	0.0011235	1.9102	0.00090217	4.289	0.0020257	472.3010218123259	39.489	0.21882	39.802	39.673	39.892	0.31263					11	6	2	0	0	0	2.3239	1	16596	16596		11.64	3.047	1	369760	+		11939	15878	6001	6026	14438	14438					0.112626372025602
ITNNRGKKRYP	11	Unmodified	_ITNNRGKKRYP_					0	0	0		ENSG00000010219|ENST00000543431|DYRK4;nc|ENSG00000010219|Q9NR20-3|DYRK4;nc|ENSG00000010219|Q9NR20-4|DYRK4;ENST00000536137.1_1_12:4714126-4719451:+|nuORF;nc|ENSG00000010219|Q9NR20-5|DYRK4;nc|ENSG00000010219|Q9NR20-2|DYRK4;nc|ENSG00000010219|Q9NR20|DYRK4	ENSG00000010219|ENST00000543431|DYRK4	ENSG00000010219|ENST00000543431|DYRK4	MSMS	GG20161007_CRH_Patient100_W632_01	3	673.8890258669853	2	673.88621	1345.75787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.604	1	96.888	96.388	97.388	0.28442								0	0	0	0.63771	1	40648	40648		11.495	2.1116	1				11940	546	6002	6027	14439	14439					0.09881762222948964
ITPDYEDVFH	10	Unmodified	_ITPDYEDVFH_					0	0	0			REV__nc|ENSG00000174775|P01112-2|HRAS	REV__nc|ENSG00000174775|P01112-2|HRAS	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.5241271853447	3	412.524149	1234.55062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.317	1	32.317	31.817	32.817	0								0	0	0	0.66222	1	13539	13539		0.69767	0.19171	1		+		11941	9880	6003	6028	14440	14440					-0.057274898357718484
ITPGLTVEIVL	11	Unmodified	_ITPGLTVEIVL_					0	0	0		tr|A0A553SIP1|A0A553SIP1_NIACIYwbEfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15235PE=4SV=1	tr|A0A553SIP1|A0A553SIP1_NIACIYwbEfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15235PE=4SV=1	tr|A0A553SIP1|A0A553SIP1_NIACIYwbEfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15235PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8570434451103	2	577.855189	1153.69583	2.6215	0.0015149	0.45633	0.00026369	3.0778	0.0017786	577.8551688533295	64.116	0.3756	66.044	65.857	66.233	1.928					27	11	3	0	0	0	0.58697	1	26887	26887		21.537	4.4241	1	2847500			11942	16213	6004	6029	14441	14441					0.12512598031230482
ITPVAIGMDL	10	Unmodified	_ITPVAIGMDL_					0	0	0			REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2850219607353	2	515.286085	1028.55762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.221	1	69.11	68.61	69.61	1.8889								0	0	0	0.49467	1	28201	28201		25.399	1.3787	1		+		11943	15798	6005	6030	14442	14442					0.044481515111101544
ITQADMEQARK	11	Unmodified	_ITQADMEQARK_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-2|KIF15	REV__nc|ENSG00000163808|Q9NS87-2|KIF15	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879577517509	3	430.887205	1289.63978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.746	1	16.573	16.073	17.073	0.82643								0	0	0	0.63775	1	6545	6545		1.2148	0.51716	1		+		11944	10699	6006	6031	14443	14443					0.006550218520942508
ITRLIKKYRKE	11	Unmodified	_ITRLIKKYRKE_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2541076540947	4	362.733143	1446.90347	-0.25798	-9.3578E-05	0.90556	0.00032848	0.64758	0.0002349	362.7333276318669	83.968	0.96175	83.968	83.596	84.558	0					47	30	2	0	0	0	0.14606	1	35074	35074		0.094841	0.094841	1	1255500			11945	1421	6007	6032	14444	14444					0.19789225019098922
ITRLIKKYRKE	11	Unmodified	_ITRLIKKYRKE_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2544433474541	4	362.733143	1446.90347	1.9928	0.00072286	-0.37264	-0.00013517	1.6202	0.0005877	362.9835569508074	82.624	0.85722	82.904	82.397	83.254	0.2802					49	27	2	0	0	0	0.14606	1	34654	34654		0.094841	0.094841	1	1409300			11946	1421	6007	6032	14445	14445					0.19789225019098922
ITRNLKTLL	9	Unmodified	_ITRNLKTLL_					0	0	0		tr|A0A7D6ZIP8|A0A7D6ZIP8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07925PE=4SV=1	tr|A0A7D6ZIP8|A0A7D6ZIP8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07925PE=4SV=1	tr|A0A7D6ZIP8|A0A7D6ZIP8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07925PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1633788943291	2	536.347866	1070.68118	2.4772	0.0013286	3.3551	0.0017995	5.8323	0.0031281	536.3490590075818	85.597	0.31139	85.597	85.417	85.728	0					21	9	3	0	0	0	0.11851	1	35592	35592		3.9444	1.8846	1	819820			11947	17104	6008	6033	14446	14446					0.1486657067375745
ITRNVRFIN	9	Unmodified	_ITRNVRFIN_					0	0	0		tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	566.8329955935478	2	566.832914	1131.65128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.75	1	62.75	62.25	63.25	0								0	0	0	0.42693	1	26162	26162		3.9444	0	1				11948	16826	6009	6034	14447	14447					0.09071631728443208
ITRNVRFIN	9	Unmodified	_ITRNVRFIN_					0	0	0		tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	tr|A0A7D6VRA7|A0A7D6VRA7_9CLOTAlpha-galactosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04820PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	566.8331786990166	2	566.832914	1131.65128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.313	1	62.643	62.143	63.143	0.32974								0	0	0	0.42089	1	26107	26107		6.7232	0.51738	1				11949	16826	6009	6034	14448	14448					0.09071631728443208
ITRPRKPRRPD	11	Unmodified	_ITRPRKPRRPD_					0	0	0			REV__nc|ENSG00000136944|O60663-2|LMX1B	REV__nc|ENSG00000136944|O60663-2|LMX1B	MSMS	GG20161007_CRH_Patient100_W632_02	4	696.4255859255791	2	696.420751	1390.82695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.56	1	116.71	116.21	117.21	0.15228								0	0	0	0.63775	1	50369	50369		1.3295	0	1		+		11950	10005	6010	6035	14449	14449					0.1471684624250429
ITRRPRPLRR	10	Unmodified	_ITRRPRPLRR_					0	0	0		nc|ENSG00000204428|Q5SRR4-3|LY6G5C	nc|ENSG00000204428|Q5SRR4-3|LY6G5C	nc|ENSG00000204428|Q5SRR4-3|LY6G5C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	330.9660522341728	4	330.96664	1319.83745	-1.7856	-0.00059097	-0.19972	-6.6101E-05	-1.9853	-0.00065707	330.966746764449	65.221	0.4415	65.221	65.008	65.449	0					39	13	4	0	0	0	0.89803	1	27188	27188		0.69767	0	1	1641600			11951	7979	6011	6036	14450	14450					0.19032873687569918
ITRSRRRRRRR	11	Unmodified	_ITRSRRRRRRR_					0	0	0			REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF	REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	784.9987060427666	2	784.998888	1567.98322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.67	1	118.84	118.34	119.34	0.16237								0	0	0	0.63775	1	51227	51227		1.3295	1.3295	1		+		11952	14027	6012	6037	14451	14451					0.2219514925632211
ITSDYQLRV	9	Unmodified	_ITSDYQLRV_					0	0	0			REV__nc|ENSG00000170703|Q8N841-4|TTLL6	REV__nc|ENSG00000170703|Q8N841-4|TTLL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.7955810427666	2	547.795663	1093.57677	1.7366	0.00095132	-0.486	-0.00026623	1.2506	0.00068509	547.7948472162348	47.077	0.33902	47.407	47.265	47.604	0.33034					18	10	2	0	0	0	0.55689	2	19781	19731;19781		13.042	3.6593	1	1038500	+		11953	14487	6013	6038	14452;14453	14453					0.03372824126381602
ITSPIPAIG	9	Unmodified	_ITSPIPAIG_					0	0	0		nc|ENSG00000103460|O15405-2|TOX3;ENSG00000103460|ENST00000219746|TOX3	nc|ENSG00000103460|O15405-2|TOX3	nc|ENSG00000103460|O15405-2|TOX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7625915408134	2	434.760561	867.506569	3.9587	0.0017211	-0.034054	-1.4806E-05	3.9246	0.0017063	434.7607377814277	86.05	0.3308	87.597	87.466	87.797	1.547					29	12	3	0	0	0	0.7849	1	36239	36239		3.9444	1.8846	1	8450900			11954	1431	6014	6039	14454	14454					0.06751570528558659
ITTGVLVALPG	11	Unmodified	_ITTGVLVALPG_					0	0	0			REV__ENSG00000186806|ENST00000335624|VSIG10L	REV__ENSG00000186806|ENST00000335624|VSIG10L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5473205447197	3	347.549859	1039.62775	-1.1612	-0.00040356	-3.4396	-0.0011954	-4.6008	-0.001599	347.5487827225249	44.672	0.64603	44.672	44.287	44.933	0					38	20	2	0	0	0	0.94603	1	18609	18609		7.0371	1.7402	1	2782200	+		11955	11512	6015	6040	14455	14455					0.10951773171223067
ITTRLRKDRHQ	11	Unmodified	_ITTRLRKDRHQ_					0	0	0			REV__ZFHX4|p.S2870Mfs*29|1|0.03|ENSG00000091656|chr8:76855527-76855545|CAAGCCCATCCATCCATTT/-|frameshift_variant	REV__ZFHX4|p.S2870Mfs*29|1|0.03|ENSG00000091656|chr8:76855527-76855545|CAAGCCCATCCATCCATTT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7103149294853	4	356.711471	1422.81678	-0.81592	-0.00029105	-0.43818	-0.0001563	-1.2541	-0.00044735	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	1.0254	1	21872	21872		2.2527	1.0379	1	19031000	+		11956	8907	6016	6041	14456	14456					0.1222823851726389
ITVEHPDTKQV	11	Unmodified	_ITVEHPDTKQV_					0	0	0		KIF14|p.L1267*|1|0.14|ENSG00000118193|chr1:200565529-200565533|TTAGG/-|frameshift_variant;ENSG00000118193|ENST00000367350|KIF14	KIF14|p.L1267*|1|0.14|ENSG00000118193|chr1:200565529-200565533|TTAGG/-|frameshift_variant	KIF14|p.L1267*|1|0.14|ENSG00000118193|chr1:200565529-200565533|TTAGG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8373901247978	2	633.838059	1265.66157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.801	1	54.771	54.271	55.271	1.9697								0	0	0	0.41775	1	22119	22119		29.841	10.479	1				11957	2031	6017	6042	14457	14457					0.039361498723110344
ITVGPVITV	9	Unmodified	_ITVGPVITV_					0	0	0			REV__tr|A0A553SUC4|A0A553SUC4_NIACIAcetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_06740PE=3SV=1	REV__tr|A0A553SUC4|A0A553SUC4_NIACIAcetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_06740PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.7870056033134	2	449.784036	897.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.888	1	64.217	63.717	64.717	0.32899								0	0	0	0.41514	1	26769	26769		7.2892	2.5332	1		+		11958	15287	6018	6043	14458	14458					0.10064430079694375
ITVGPVQK	8	Unmodified	_ITVGPVQK_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2601806521416	2	421.260728	840.506903	2.3722	0.00099931	-3.0079	-0.0012671	-0.63568	-0.00026779	421.2592775050453	64.32	0.56847	66.248	65.95	66.518	1.928					36	17	3	0	0	0	0.88055	1	26977	26977		8.5933	3.3626	1	8316500			11959	2392	6019	6044	14459	14459					0.08026990248424681
ITVMVLKS	8	Unmodified	_ITVMVLKS_					0	0	0			REV__ENST00000523024.1_2_8:10356260-10405046:-|nuORF	REV__ENST00000523024.1_2_8:10356260-10405046:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.7753173708916	2	445.772614	889.530675	4.8156	0.0021467	1.2569	0.00056028	6.0725	0.0027069	445.7731984243468	87.631	0.44545	89.126	88.919	89.364	1.4953					37	13	4	0	0	0	0.89008	1	36920	36920		2.5775	0	1	10122000	+		11960	13640	6020	6045	14460	14460					0.0814908769059457
ITVTSLVIE	9	Unmodified	_ITVTSLVIE_					0	0	0		tr|A0A553SUG2|A0A553SUG2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_06910PE=4SV=1	tr|A0A553SUG2|A0A553SUG2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_06910PE=4SV=1	tr|A0A553SUG2|A0A553SUG2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_06910PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5751830935478	1	974.576839	973.569563	2.0849	0.0020319	-0.33563	-0.00032709	1.7493	0.0017048	974.5770672833137	91.648	0.3194	91.648	91.436	91.756	0					22	9	3	0	0	0	0.19075	1	38241	38241		34.102	0	1	1991300			11961	16691	6021	6046	14461	14461					0.0817209152594387
ITVVSAMLIL	10	Unmodified	_ITVVSAMLIL_					0	0	0			REV__ENST00000537699.1_1_12:10603035-10603776:-|nuORF	REV__ENST00000537699.1_1_12:10603035-10603776:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3265869021416	2	530.327753	1058.64095	2.2277	0.0011814	-2.6316	-0.0013956	-0.40399	-0.00021425	530.326082908306	65.956	0.81906	67.355	66.817	67.636	1.3989					46	26	2	0	0	0	0.17319	1	27661	27661		52.268	3.9225	1	2701000	+		11962	9909	6022	6047	14462	14462					0.11397887958969477
ITVYPTDPPK	10	Unmodified	_ITVYPTDPPK_					0	0	0		ENSG00000154124|ENST00000284274|OTULIN	ENSG00000154124|ENST00000284274|OTULIN	ENSG00000154124|ENST00000284274|OTULIN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	565.8874999880791	2	565.808239	1129.60193	2.6474	0.0014979	2.6297	0.0014879	5.2771	0.0029858	565.809744942903	63.514	0.38234	65.458	65.216	65.598	1.9444					20	11	3	0	0	0	0.1248	1	26684	26684		13.042	1.4022	1	3682400			11963	3375	6023	6048	14463	14463					0.042308789289336346
ITWATWTSI	9	Unmodified	_ITWATWTSI_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7831298708916	2	539.782025	1077.5495	2.6546	0.0014329	2.8773	0.0015531	5.5319	0.002986	539.7832197077774	78.116	0.91212	79.396	78.949	79.862	1.2809					90	29	5	0	0	0	0.46905	1	32859	32859		16.942	1.0951	1	8955600			11964	3843	6024	6049	14464	14464					0.013823405859739069
ITYLKKWRYLW	11	Unmodified	_ITYLKKWRYLW_					0	0	0		tr|A0A553SGY1|A0A553SGY1_NIACIQuinoloxidasesubunit1OS=NialliacirculansOX=1397GN=qoxBPE=3SV=1	tr|A0A553SGY1|A0A553SGY1_NIACIQuinoloxidasesubunit1OS=NialliacirculansOX=1397GN=qoxBPE=3SV=1	tr|A0A553SGY1|A0A553SGY1_NIACIQuinoloxidasesubunit1OS=NialliacirculansOX=1397GN=qoxBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	785.4509765505791	2	785.450654	1568.88676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.7	1	101.89	101.39	102.39	0.19076								0	0	0	0.63775	1	42757	42757		1.3295	0	1				11965	16127	6025	6050	14465	14465					0.12506724133163516
ITYRELLE	8	Unmodified	_ITYRELLE_					0	0	0		nc|ENSG00000154930|Q9NUB1-4|ACSS1;nc|ENSG00000154930|Q9NUB1-2|ACSS1;ENSG00000154930|ENST00000323482|ACSS1	nc|ENSG00000154930|Q9NUB1-4|ACSS1	nc|ENSG00000154930|Q9NUB1-4|ACSS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	518.3185912966728	2	518.787307	1035.56006	1.9816	0.001028	-1.8971	-0.00098419	0.084494	4.3834E-05	518.7863299725266	79.425	0.40279	79.425	79.206	79.609	0					28	12	3	0	0	0	2.3239	1	33106	33106		23.148	6.2061	1	1594300			11966	3403	6026	6051	14466	14466					0.04370323240414109
IVAFAIYYI	9	Unmodified	_IVAFAIYYI_					0	0	0		ENSG00000197674|ENST00000641159|OR51C1P	ENSG00000197674|ENST00000641159|OR51C1P	ENSG00000197674|ENST00000641159|OR51C1P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1609985232353	2	536.807511	1071.60047	1.8288	0.00098169	-3.0064	-0.0016139	-1.1777	-0.00063218	536.805410316253	48.246	0.19155	49.634	49.49	49.681	1.388					9	5	2	0	0	0	0.11109	1	20176	20176		9.3474	5.0182	1	556530			11967	5019	6027	6052	14467	14467					0.06753289630842119
IVAQHQSI	8	Unmodified	_IVAQHQSI_					0	0	0			REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2547790408134	2	448.253434	894.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.69	1	103.85	103.35	104.35	0.16055								0	0	0	1.0178	1	43769	43769		2.5775	0	1		+		11968	8462	6028	6053	14468	14468					0.04084918100284085
IVATIPVRFLP	11	Unmodified	_IVATIPVRFLP_					0	0	0			REV__nc|ENSG00000134900|P29144|TPP2	REV__nc|ENSG00000134900|P29144|TPP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	613.3887206912041	2	613.386991	1224.75943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.574	1	85.574	85.074	86.074	0								0	0	0	0.63775	1	35654	35654		1.3295	0	1		+		11969	9923	6029	6054	14469	14469					0.1560400325899991
IVAVVEGR	8	Unmodified	_IVAVVEGR_					0	0	0		ENSG00000057468|ENST00000263187|MSH4	ENSG00000057468|ENST00000263187|MSH4	ENSG00000057468|ENST00000263187|MSH4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	842.5165283083916	1	842.509429	841.502152	1.4408	0.0012139	3.8178	0.0032166	5.2587	0.0044305	842.5114784739737	79.465	0.30665	81.181	81.015	81.321	1.7167					14	9	2	0	0	0	0.66111	1	33351	33351		34.187	0	1	1034200			11970	728	6030	6055	14470	14470					0.0750610610567719
IVAYNKWNR	9	Unmodified	_IVAYNKWNR_					0	0	0			REV__tr|A0A553SIX8|A0A553SIX8_NIACIYkoSOS=NialliacirculansOX=1397GN=CEQ21_15695PE=4SV=1	REV__tr|A0A553SIX8|A0A553SIX8_NIACIYkoSOS=NialliacirculansOX=1397GN=CEQ21_15695PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3220092654228	2	582.31964	1162.62473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.96	1	112.96	112.46	113.46	0								0	0	0	0.40883	1	48816	48816		7.9102	1.7044	1		+		11971	14873	6031	6056	14471	14471					0.04991942837091301
IVCAQFPQSL	10	Unmodified	_IVCAQFPQSL_					0	0	0			REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF	REV__ENST00000464585.1_1_3:51741837-51742137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.2886840701103	2	553.289159	1104.56377	2.7804	0.0015384	-1.5766	-0.0008723	1.2038	0.00066605	553.288476659836	74.634	0.44377	76.415	76.131	76.575	1.7817					27	13	3	0	0	0	0.57775	1	31272	31272		24.021	2.2739	1	3737900	+		11972	13227	6032	6057	14472	14472					0.015666697426240717
IVCNGLVGFLL	11	Unmodified	_IVCNGLVGFLL_					0	0	0		nc|ENSG00000168913|Q6UWT2-2|ENHO;ENSG00000168913|ENST00000399775|ENHO	nc|ENSG00000168913|Q6UWT2-2|ENHO	nc|ENSG00000168913|Q6UWT2-2|ENHO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8356201052666	2	574.330827	1146.6471	2.9897	0.0017171	-1.3979	-0.00080284	1.5919	0.00091425	574.3289969031978	81.032	0.27536	82.265	82.133	82.408	1.2332					20	8	3	0	0	0	0.83203	1	34057	34057		13.906	1.3745	1	2005100			11973	4059	6033	6058	14473	14473					0.07964406190490081
IVDDKFFKL	9	Unmodified	_IVDDKFFKL_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10;MPHOSPH10|p.D241Lfs*23|1|0.15|ENSG00000124383|chr2:71133526-71133529|ATTG/-|frameshift_variant;MPHOSPH10-ATP6V1B1|1|fusion	ENSG00000124383|ENST00000244230|MPHOSPH10;MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	375.5503723025322	3	375.549859	1123.62775	1.1099	0.00041681	0.87035	0.00032686	1.9802	0.00074367	375.5498565175672	46.852	0.28695	48.234	48.027	48.314	1.3825					13	8	2	0	0	0	0.15456	1	19616	19616		29.437	12.389	1	1242500			11974	7799;2226	6034	6059	14474	14474					0.07087773171247136
IVDDKFFKL	9	Unmodified	_IVDDKFFKL_					0	0	0		ENSG00000124383|ENST00000244230|MPHOSPH10;MPHOSPH10|p.D241Lfs*23|1|0.15|ENSG00000124383|chr2:71133526-71133529|ATTG/-|frameshift_variant;MPHOSPH10-ATP6V1B1|1|fusion	ENSG00000124383|ENST00000244230|MPHOSPH10;MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5508300662041	3	375.549859	1123.62775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.373	1	48.344	47.844	48.844	1.9703								0	0	0	0.1299	1	19426	19426		23.801	9.3957	1				11975	7799;2226	6034	6059	14475	14475					0.07087773171247136
IVDELSTIFQ	10	Unmodified	_IVDELSTIFQ_					0	0	0			REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8121215701103	2	582.810979	1163.6074	2.0519	0.0011959	1.5085	0.00087917	3.5604	0.002075	582.8122351899037	48.587	0.58824	48.587	48.19	48.778	0					32	18	3	0	0	0	0.50772	2	20265	20265;20315		27.223	11.376	1	1955600	+		11976	14712	6035	6060	14476;14477	14476					0.03214557720752964
IVDELSTIFQ	10	Unmodified	_IVDELSTIFQ_					0	0	0			REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8144409060478	2	582.810979	1163.6074	1.6299	0.00094993	4.3217	0.0025187	5.9516	0.0034686	582.8135235476598	48.159	0.3507	48.489	48.319	48.67	0.33034					21	11	3	0	0	0	0.78738	2	20171	20171;20224		13.615	2.8154	1	864580	+		11977	14712	6035	6060	14478;14479	14478					0.03214557720752964
IVDELSTIFQ	10	Unmodified	_IVDELSTIFQ_					0	0	0			REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	582.810979	1163.6074	2.0519	0.0011959	1.5085	0.00087917	3.5604	0.002075	582.8122351899037	48.587	0.58824	48.587	48.19	48.778	0	0.048918	-0.0017244	NaN	27.223	32	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1955600	+		11978	14712	6035	6060							0.03214557720752964
IVDELSTIFQ	10	Unmodified	_IVDELSTIFQ_					0	0	0			REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	REV__tr|A0A553SFP1|A0A553SFP1_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_09285PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	582.810979	1163.6074	1.6299	0.00094993	4.3217	0.0025187	5.9516	0.0034686	582.8135235476598	48.159	0.3507	48.489	48.319	48.67	0.33034	-0.048918	0.0015546	NaN	27.223	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	864580	+		11979	14712	6035	6060							0.03214557720752964
IVDGVLLD	8	Unmodified	_IVDGVLLD_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	843.4839355349541	1	843.482211	842.474934	2.4706	0.0020839	-0.95253	-0.00080344	1.518	0.0012804	843.4811169439768	58.343	0.31546	58.666	58.46	58.776	0.32298					16	9	2	0	0	0	0.35773	1	24436	24436		63.563	0	1	951120	+		11980	11179	6036	6061	14480	14480					0.04739577774614645
IVDPFQILV	9	Unmodified	_IVDPFQILV_					0	0	0		TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000470012.1_1_2:73959253-73964442:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3109619021416	2	522.310418	1042.60628	1.7589	0.00091869	-0.45475	-0.00023752	1.3041	0.00068117	522.3102195472185	96.757	0.13527	96.757	96.665	96.8	0					10	4	3	0	0	0	0.083604	1	40445	40445		54.774	14.816	1	2701900			11981	3063	6037	6062	14481	14481					0.08668388142518779
IVDPFQILV	9	Unmodified	_IVDPFQILV_					0	0	0		TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000470012.1_1_2:73959253-73964442:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3101684451103	2	522.310418	1042.60628	2.8886	0.0015087	-1.3776	-0.00071955	1.511	0.00078919	522.3097360919917	96.588	0.12057	96.693	96.635	96.755	0.105					9	3	3	0	0	0	0.10993	1	40423	40423		46.021	11.919	1	1827000			11982	3063	6037	6062	14482	14482					0.08668388142518779
IVDPFQILV	9	Unmodified	_IVDPFQILV_					0	0	0		TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000470012.1_1_2:73959253-73964442:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3115112185478	2	522.310418	1042.60628	3.9945	0.0020864	-0.45285	-0.00023653	3.5416	0.0018498	522.3102123379907	96.32	0.15331	96.741	96.665	96.818	0.4212					7	4	2	0	0	0	0.083604	1	40539	40539		54.774	6.4277	1	2668500			11983	3063	6037	6062	14483	14483					0.08668388142518779
IVDPFQILV	9	Unmodified	_IVDPFQILV_					0	0	0		TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000470012.1_1_2:73959253-73964442:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	522.310418	1042.60628	3.1983	0.0016705	2.7723	0.001448	5.9705	0.0031185	522.311855849741	96.149	0.17733	96.551	96.461	96.638	0.40208	-0.13469	0.0029225	NaN	54.774	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1867500			11984	3063	6037	6062							0.08668388142518779
IVDPSLIHV	9	Unmodified	_IVDPSLIHV_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.7932617068291	2	496.792392	991.570232	1.7345	0.00086168	0.19819	9.8457E-05	1.9327	0.00096014	496.7925554597554	50.305	0.19298	50.305	50.212	50.405	0					9	5	2	0	0	0	0.24063	1	20994	20994		28.487	10.352	1	645420			11985	1927	6038	6063	14484	14484					0.07410930965681928
IVDPSLIHV	9	Unmodified	_IVDPSLIHV_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A;ENST00000488971.1_1_2:86683605-86693535:+|nuORF	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7916442751884	2	496.792392	991.570232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.518	1	49.906	49.406	50.406	1.388								0	0	0	0.061573	1	20309	20309		42.095	6.0504	1				11986	1927	6038	6063	14485	14485					0.07410930965681928
IVEHAIDRV	9	Unmodified	_IVEHAIDRV_					0	0	0			REV__tr|A0A7D6VZE4|A0A7D6VZE4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19330PE=4SV=1	REV__tr|A0A7D6VZE4|A0A7D6VZE4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19330PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2979614138603	2	526.298373	1050.58219	1.7236	0.00090711	-2.3536	-0.0012387	-0.63007	-0.00033161	526.2970530725003	96.305	0.15643	96.305	96.23	96.387	0					7	4	2	0	0	0	0.39927	1	40253	40253		20.454	2.3073	1	2482500	+		11987	15568	6039	6064	14486	14486					0.058925477088678235
IVEMTTKD	8	Unmodified	_IVEMTTKD_					0	0	0		ENSG00000221944|ENST00000408957|TIGD1	ENSG00000221944|ENST00000408957|TIGD1	ENSG00000221944|ENST00000408957|TIGD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	312.8288757205009	3	312.828404	935.463383	0.66159	0.00020696	0.20524	6.4204E-05	0.86683	0.00027117	312.82850842127266	54.704	1.2596	56.673	55.845	57.105	1.9684					52	41	2	0	0	0	0.87065	1	22939	22939		11.495	2.1116	1	5710200			11988	5275	6040	6065	14487	14487					-0.006929873110266271
IVEQYNGSR	9	Unmodified	_IVEQYNGSR_					0	0	0			REV__ENST00000523206.5_1_8:95850795-95884149:+|nuORF	REV__ENST00000523206.5_1_8:95850795-95884149:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1919433474541	2	533.269813	1064.52507	1.6592	0.00088482	1.6247	0.00086638	3.2839	0.0017512	533.2703237403554	39.734	0.49598	39.734	39.513	40.009	0					26	15	3	0	0	0	0.11719	1	16717	16717		3.9444	0.3479	1	1022000	+		11989	10757	6041	6066	14488	14488					-0.004609195675357114
IVESAPKSAH	10	Unmodified	_IVESAPKSAH_					0	0	0			REV__nc|ENSG00000053501|Q9NZ43-3|USE1	REV__nc|ENSG00000053501|Q9NZ43-3|USE1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	520.3260986208916	2	519.782556	1037.55056	1.7677	0.00091883	0.28226	0.00014671	2.05	0.0010655	520.2860963207152	46.455	0.15007	48.425	48.379	48.529	1.9703					6	4	2	0	0	0	0.12493	1	19464	19464		10.824	5.5933	1	161860	+		11990	8628	6042	6067	14489	14489					0.033285549548736526
IVEYHLPR	8	Unmodified	_IVEYHLPR_					0	0	0			REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7921020388603	2	513.790184	1025.56581	1.5736	0.00080851	1.9588	0.0010064	3.5324	0.0018149	513.79080641346	31.514	0.2503	31.514	31.41	31.66	0					12	7	2	0	0	0	0.88846	1	13203	13203		2.3027	0	1	436410	+		11991	11712	6043	6068	14490	14490					0.05405466542742943
IVEYHLPR	8	Unmodified	_IVEYHLPR_					0	0	0			REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	REV__ENST00000419087.1_1_1:247782982-247783861:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	513.790184	1025.56581	1.5736	0.00080851	1.9588	0.0010064	3.5324	0.0018149	513.79080641346	31.514	0.2503	31.514	31.41	31.66	0	0.046929	3.7343E-05	NaN	2.3027	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436410	+		11992	11712	6043	6068							0.05405466542742943
IVFLAFKKI	9	Unmodified	_IVFLAFKKI_					0	0	0		ENST00000465541.1_1_13:51524391-51530607:+|nuORF	ENST00000465541.1_1_13:51524391-51530607:+|nuORF	ENST00000465541.1_1_13:51524391-51530607:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2389709353447	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.809	1	93.809	93.309	94.309	0								0	0	0	0.42693	1	39204	39204		0.26902	0	1				11993	6698	6044	6069	14491	14491					0.15929848172845595
IVFRYYYVKLW	11	Unmodified	_IVFRYYYVKLW_					0	0	0			REV__ENST00000472871.1_1_13:95120883-95131509:-|nuORF	REV__ENST00000472871.1_1_13:95120883-95131509:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6259033083916	3	517.290379	1548.84931	2.1937	0.0011348	-0.56961	-0.00029465	1.6241	0.00084012	517.6239096368689	52.824	1.495	52.824	51.756	53.251	0					97	48	3	0	0	0	1.0388	1	22169	22169		0.50596	0.051438	1	2569700	+		11994	13298	6045	6070	14492	14492					0.096836328675181
IVFRYYYVKLW	11	Unmodified	_IVFRYYYVKLW_					0	0	0			REV__ENST00000472871.1_1_13:95120883-95131509:-|nuORF	REV__ENST00000472871.1_1_13:95120883-95131509:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6244384646416	3	517.290379	1548.84931	3.3618	0.001739	1.7576	0.00090921	5.1194	0.0026482	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0388	1	50732	50732		0.50596	0.17668	1	11283000	+		11995	13298	6045	6070	14493	14493					0.096836328675181
IVGATRCA	8	Unmodified	_IVGATRCA_					0	0	0		tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2185241580009	2	395.71563	789.416708	0.34923	0.0001382	2.8592	0.0011314	3.2084	0.0012696	395.7165566777266	50.678	0.3804	50.678	50.501	50.881	0					28	11	3	0	0	0	0.79422	1	21162	21162		21.747	2.3076	1	4181100			11996	16621	6046	6071	14494	14494					0.013576176483297786
IVGATRCA	8	Unmodified	_IVGATRCA_					0	0	0		tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.7173950076103	2	395.71563	789.416708	1.7788	0.00070389	2.8112	0.0011124	4.59	0.0018163	395.7162492064656	50.139	0.68864	50.469	50.263	50.952	0.33019					28	21	2	0	0	0	0.79422	2	20965	20965;21014		21.747	2.3076	1	1805700			11997	16621	6046	6071	14495;14496	14495					0.013576176483297786
IVGATRCA	8	Unmodified	_IVGATRCA_					0	0	0		tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	tr|A0A553SSP2|A0A553SSP2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.7166320681572	2	395.71563	789.416708	0.7542	0.00029845	3.0713	0.0012154	3.8255	0.0015138	395.7164773048591	48.676	0.33808	50.064	49.864	50.202	1.388					17	10	2	0	0	0	0.79422	1	20385	20385		21.747	0.87544	1	1083000			11998	16621	6046	6071	14497	14497					0.013576176483297786
IVGEELYLWY	10	Unmodified	_IVGEELYLWY_					0	0	0			REV__ENSG00000075429|ENST00000533854|CACNG5	REV__ENSG00000075429|ENST00000533854|CACNG5	MSMS	GG20161007_CRH_Patient100_W632_02	4	428.8909484744072	3	428.88854	1283.64379	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.3	1	110.45	109.95	110.95	0.15228								0	0	0	0.66254	1	47833	47833		0.15932	0	1		+		11999	8762	6047	6072	14498	14498					0.013314346174638558
IVGGERMQND	10	Unmodified	_IVGGERMQND_					0	0	0			REV__nc|ENSG00000085231|Q9Y3D8-2|AK6	REV__nc|ENSG00000085231|Q9Y3D8-2|AK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1118.531787097454	1	1118.52588	1117.51861	4.6297	0.0051784	-0.19452	-0.00021758	4.4352	0.0049609	1118.526434748719	87.07	0.21665	88.565	88.425	88.642	1.4953					10	6	2	0	0	0	0.82659	1	36693	36693		9.3831	0.78985	1	1439500	+		12000	8846	6048	6073	14499	14499					-0.0354518079054742
IVGPICTLTTF	11	Unmodified	_IVGPICTLTTF_					0	0	0			REV__ENST00000578767.5_1_17:17997264-18002438:+|nuORF	REV__ENST00000578767.5_1_17:17997264-18002438:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8196899294853	2	582.820292	1163.62603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.022	1	45.966	45.466	46.466	1.9438								0	0	0	0.63775	1	18456	18456		6.2058	0	1		+		12001	9259	6049	6074	14500	14500					0.050763960909534944
IVGTRNMFTI	10	Unmodified	_IVGTRNMFTI_					0	0	0			REV__tr|A0A7D7ADL5|A0A7D7ADL5_9CLOTEndonucleaseMutS2OS=ClostridiumintestinaleOX=36845GN=HZF06_23300PE=4SV=1	REV__tr|A0A7D7ADL5|A0A7D7ADL5_9CLOTEndonucleaseMutS2OS=ClostridiumintestinaleOX=36845GN=HZF06_23300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3156616091728	2	576.315709	1150.61686	1.1373	0.00065543	-0.80045	-0.00046131	0.33682	0.00019412	576.3148392449792	99.159	0.11919	99.159	99.079	99.198	0					7	3	3	0	0	0	0.5476	1	41504	41504		25.399	3.6527	1	11351000	+		12002	15909	6050	6075	14501	14501					0.047580475252971155
IVHAQLIPQ	9	Unmodified	_IVHAQLIPQ_					0	0	0		ENST00000321895.6_1_3:49201211-49201499:-|nuORF	ENST00000321895.6_1_3:49201211-49201499:-|nuORF	ENST00000321895.6_1_3:49201211-49201499:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8058654665947	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.834	1	68.222	67.722	68.722	1.3888								0	0	0	0.36184	1	28037	28037		12.532	1.7076	1				12003	5849	6051	6076	14502	14502					0.08902039576844345
IVILTLPLGIY	11	Unmodified	_IVILTLPLGIY_					0	0	0			REV__ENST00000540608.5_1_18:21119776-21166285:-|nuORF	REV__ENST00000540608.5_1_18:21119776-21166285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5996276736259	3	405.596809	1213.7686	4.7377	0.0019216	2.1521	0.00087287	6.8898	0.0027945	405.5976490483664	89.67	0.49698	90.69	90.461	90.958	1.0199					34	15	4	0	0	0	1.0362	1	37758	37758		1.3296	0	1	2761600	+		12004	10151	6052	6077	14503	14503					0.17026351824665653
IVILTLPLGIY	11	Unmodified	_IVILTLPLGIY_					0	0	0			REV__ENST00000540608.5_1_18:21119776-21166285:-|nuORF	REV__ENST00000540608.5_1_18:21119776-21166285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	405.6000244021416	3	405.596809	1213.7686	4.5311	0.0018378	2.3052	0.00093499	6.8363	0.0027728	405.5978335137484	89.358	0.4676	90.763	90.488	90.955	1.4044					28	14	3	0	0	0	1.0362	1	37590	37590		1.3296	0	1	2213800	+		12005	10151	6052	6077	14504	14504					0.17026351824665653
IVISATLVIL	10	Unmodified	_IVISATLVIL_					0	0	0		TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant;ENSG00000149256|ENST00000278550|TENM4	TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant	TENM4|p.S1214Rfs*51|1|0.08|ENSG00000149256|chr11:78722826-78722826|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	521.7159911990166	2	521.349543	1040.68453	1.8624	0.00097094	-0.2107	-0.00010985	1.6517	0.00086109	521.3498237996073	70.891	0.25571	70.891	70.78	71.035	0					14	7	2	0	0	0	0.11298	1	29545	29545		46.021	8.047	1	842690			12006	3234	6053	6078	14505	14505					0.16581820727742524
IVIWSVVYI	9	Unmodified	_IVIWSVVYI_					0	0	0		tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3293334841728	2	546.328611	1090.64267	1.5915	0.00086946	-1.6666	-0.00091052	-0.075155	-4.1059E-05	546.3278051599433	49.236	0.37435	50.627	50.391	50.765	1.3911					31	11	3	0	0	0	0.069258	2	20579	20579;20628		60.39	1.0212	1	5962100			12007	16653	6054	6079	14506;14507	14506					0.10097265039235026
IVIWSVVYI	9	Unmodified	_IVIWSVVYI_					0	0	0		tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	tr|A0A553STK6|A0A553STK6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_05290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3282348513603	2	546.328611	1090.64267	1.9452	0.0010627	-2.4423	-0.0013343	-0.49711	-0.00027158	546.327538543514	48.655	0.43348	50.632	50.359	50.792	1.9772					31	13	3	0	0	0	0.069258	1	20369	20369		60.39	1.0212	1	5255400			12008	16653	6054	6079	14508	14508					0.10097265039235026
IVKDVISLYYE	11	Unmodified	_IVKDVISLYYE_					0	0	0			REV__tr|A0A553SQN0|A0A553SQN0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08000PE=4SV=1	REV__tr|A0A553SQN0|A0A553SQN0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08000PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	447.9155456423759	3	447.914866	1340.72277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.645	1	43.968	43.468	44.468	0.32389								0	0	0	0.63775	1	18323	18323		0.40827	0	1		+		12009	15133	6055	6080	14509	14509					0.06603661851750076
IVKEAKVSI	9	Unmodified	_IVKEAKVSI_					0	0	0		tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8174926638603	2	493.815867	985.617182	1.9203	0.00094829	-0.31526	-0.00015568	1.6051	0.00079261	493.81643318023913	66.528	0.4006	67.917	67.689	68.089	1.3887					30	12	3	0	0	0	0.46905	1	27883	27883		16.942	1.1741	1	1450800			12010	16945	6056	6081	14510	14510					0.12379790516808953
IVKEAKVSI	9	Unmodified	_IVKEAKVSI_					0	0	0		tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8170043826103	2	493.815867	985.617182	1.7996	0.00088867	-0.58029	-0.00028655	1.2193	0.00060211	493.8161326264414	66.048	0.37142	67.957	67.767	68.138	1.9085					26	11	3	0	0	0	0.39927	1	27722	27722		20.454	4.6064	1	1382500			12011	16945	6056	6081	14511	14511					0.12379790516808953
IVKEAKVSI	9	Unmodified	_IVKEAKVSI_					0	0	0		tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	tr|A0A7D6VU97|A0A7D6VU97_9CLOTBifunctionalfolatesynthesisproteinOS=ClostridiumintestinaleOX=36845GN=folKPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.815867	985.617182	1.9203	0.00094829	-0.31526	-0.00015568	1.6051	0.00079261	493.81643318023913	66.528	0.4006	67.917	67.689	68.089	1.3887	-0.019984	0.00016044	NaN	20.454	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1450800			12012	16945	6056	6081							0.12379790516808953
IVKFKYKTSRR	11	Unmodified	_IVKFKYKTSRR_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	713.4385253787041	2	713.438078	1424.8616	0.19266	0.00013745	0.067517	4.8169E-05	0.26017	0.00018562	713.4381738620795	51.3	0.97182	52.694	52.316	53.287	1.3938					108	32	5	0	0	0	0.91768	3	21419	21419;21457;21547		8.7454	3.0136	1	44641000	+		12013	9074	6057	6082	14512;14513;14514	14512					0.1661666933057404
IVKFKYKTSRR	11	Unmodified	_IVKFKYKTSRR_					0	0	0			REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	REV__nc|ENSG00000102531|Q9Y2H6-2|FNDC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.9632446169853	3	475.961144	1424.8616	0.82785	0.00039402	0.055166	2.6257E-05	0.88301	0.00042028	475.96244168629164	51.308	2.4007	52.702	52.226	54.627	1.3938					231	78	6	0	0	0	0.98155	3	21456	21456;21535;21581		4.1166	1.8639	1	578340000	+		12014	9074	6057	6082	14515;14516;14517	14515					0.1661666933057404
IVKFRVTL	8	Unmodified	_IVKFRVTL_					0	0	0		ENST00000439875.1_1_9:115871740-115871833:-|nuORF	ENST00000439875.1_1_9:115871740-115871833:-|nuORF	ENST00000439875.1_1_9:115871740-115871833:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.3227416872978	2	488.32112	974.627687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.34	1	105.5	105	106	0.16679								0	0	0	1.0178	1	44779	44779		1.8442	1.0506	1				12015	6551	6058	6083	14518	14518					0.13935817961908015
IVKHFPKLL	9	Unmodified	_IVKHFPKLL_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;ENST00000466561.1_1_1:17313027-17318334:-|nuORF;ATP13A2|p.P905Sfs*10|1|0.15|ENSG00000159363|chr1:16988371-16988372|-/A|frameshift_variant	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MSMS	GG20161007_CRH_Patient100_A02_01	1	547.8575927615166	2	547.85787	1093.70119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.665	1	91.665	91.165	92.165	0								0	0	0	0.42693	1	38307	38307		5.2307	0	1				12016	3525	6059	6084	14519	14519					0.15808366404371554
IVKLRKKAKYT	11	Unmodified	_IVKLRKKAKYT_					0	0	0		ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.7281677126884	4	337.726324	1346.87619	-0.088738	-2.9969E-05	3.2653	0.0011028	3.1766	0.0010728	337.72733422842384	22.614	0.30972	23.829	23.609	23.919	1.2145					22	9	3	0	0	0	1.0391	1	9425	9425		0.40827	0	1	791100			12017	5943	6060	6085	14520	14520					0.2166274147873537
IVKLRKKAKYT	11	Unmodified	_IVKLRKKAKYT_					0	0	0		ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	337.726324	1346.87619	0.2751	9.2908E-05	2.3783	0.00080322	2.6534	0.00089613	337.727045618718	23.848	0.3406	24.091	23.856	24.197	0.24252	0.20228	-0.00032721	NaN	0.40827	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439920			12018	5943	6060	6085							0.2166274147873537
IVKLRKKAKYT	11	Unmodified	_IVKLRKKAKYT_					0	0	0		ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	ENST00000342992.10_3_2:179494164-179495619:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	337.726324	1346.87619	-0.015832	-5.3467E-06	2.1124	0.00071342	2.0966	0.00070807	337.9776240918925	22.131	0.46049	23.747	23.401	23.862	1.6158	-0.14215	-0.00068641	NaN	0.40827	32	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	727030			12019	5943	6060	6085							0.2166274147873537
IVKPFLPREL	10	Unmodified	_IVKPFLPREL_					0	0	0		tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.9243347048759	3	404.588536	1210.74378	1.0037	0.0004061	1.9133	0.00077411	2.9171	0.0011802	404.9236345887662	25.315	0.67786	25.567	25.243	25.921	0.25197					32	21	2	0	0	0	0.8974	1	10579	10579		1.7423	0.52744	1	782400			12020	16771	6061	6086	14521	14521					0.14683716741933495
IVKPFLPREL	10	Unmodified	_IVKPFLPREL_					0	0	0		tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	tr|A0A7D6VPL8|A0A7D6VPL8_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_23525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.5892211794853	3	404.588536	1210.74378	1.0014	0.00040515	1.5031	0.00060815	2.5045	0.0010133	404.58916016684327	24.023	0.61966	25.265	25.021	25.641	1.241					36	19	2	0	0	0	0.89803	1	10130	10130		0.62683	0.17231	1	529470			12021	16771	6061	6086	14522	14522					0.14683716741933495
IVLAEVLTG	9	Unmodified	_IVLAEVLTG_					0	0	0		ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	914.5594360232353	1	914.55571	913.548434	1.5892	0.0014534	-2.8211	-0.0025801	-1.2319	-0.0011266	914.5529704241136	67.185	0.5794	67.185	66.99	67.569	0					30	18	2	0	0	0	0.15478	1	27942	27942		38.151	0	1	2353300			12022	2594	6062	6087	14523	14523					0.08820126217096913
IVLGEMQYFI	10	Unmodified	_IVLGEMQYFI_					0	0	0			REV__tr|A0A7D6VQD2|A0A7D6VQD2_9CLOTPhenylalanine--tRNAligasealphasubunitOS=ClostridiumintestinaleOX=36845GN=pheSPE=3SV=1	REV__tr|A0A7D6VQD2|A0A7D6VQD2_9CLOTPhenylalanine--tRNAligasealphasubunitOS=ClostridiumintestinaleOX=36845GN=pheSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.8194457888603	2	606.820292	1211.62603	0.97289	0.00059037	-1.2293	-0.00074595	-0.25638	-0.00015558	606.8192101322373	70.796	0.48367	72.634	72.349	72.832	1.8378					54	15	5	0	0	0	0.44465	2	29711	29660;29711		30.637	0	1	7554400	+		12023	15382	6063	6088	14524;14525	14525					0.028683960909575035
IVLPDTFFNF	10	Unmodified	_IVLPDTFFNF_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|150|2|anti-sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|150|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8206054568291	2	606.818607	1211.62266	2.3738	0.0014404	-0.48845	-0.0002964	1.8853	0.001144	606.8182103627516	71.211	0.47964	72.552	72.333	72.812	1.3415					53	15	5	0	0	0	0.47063	1	29831	29831		29.082	0	1	7903000	+		12024	14246	6064	6089	14526	14526					0.025314693086102125
IVLPLNLFL	9	Unmodified	_IVLPLNLFL_					0	0	0			REV__ENSG00000113369|ENST00000265138|ARRDC3	REV__ENSG00000113369|ENST00000265138|ARRDC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.7173339724541	2	521.338978	1040.6634	1.3954	0.00072749	-3.3264	-0.0017342	-1.931	-0.0010067	521.3373149625198	68.791	0.45189	70.644	70.468	70.92	1.853					21	14	2	0	0	0	0.10591	1	28957	28957		12.532	0	1	1985600	+		12025	9382	6065	6090	14527	14527					0.14469855418883526
IVLPNSPASWE	11	Unmodified	_IVLPNSPASWE_					0	0	0			REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8200561404228	2	606.816596	1211.61864	2.3738	0.0014404	2.8262	0.001715	5.2	0.0031554	606.8182103627516	71.211	0.47964	72.552	72.333	72.812	1.3415					53	15	5	0	0	0	0.31168	1	29879	29879		31.268	0.6318	1	7903000	+		12026	11599	6066	6091	14528	14528					0.02129379814891763
IVLPNSPASWE	11	Unmodified	_IVLPNSPASWE_					0	0	0			REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	606.816596	1211.61864	2.3738	0.0014404	2.8262	0.001715	5.2	0.0031554	606.8182103627516	71.211	0.47964	72.552	72.333	72.812	1.3415	-0.042453	-0.00090882	NaN	31.268	53	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7903000	+		12027	11599	6066	6091							0.02129379814891763
IVLPNSPASWE	11	Unmodified	_IVLPNSPASWE_					0	0	0			REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	REV__nc|ENSG00000189013|Q99706-5|KIR2DL4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	606.816596	1211.61864	0.9729	0.00059037	4.8628	0.0029508	5.8357	0.0035412	606.8192101322373	70.796	0.48367	72.634	72.349	72.832	1.8378	0.038794	0.0015629	NaN	31.268	54	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7554400	+		12028	11599	6066	6091							0.02129379814891763
IVLSEISDI	9	Unmodified	_IVLSEISDI_					0	0	0		nc|ENSG00000185842|Q0VDD8|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14	nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7826721072197	2	494.78169	987.548827	2.9717	0.0014704	1.1033	0.00054589	4.075	0.0020162	494.7820941999604	63.852	0.36802	65.78	65.613	65.981	1.928					28	11	3	0	0	0	0.3154	1	26837	26837		24.674	0	1	4173700			12029	4765	6067	6092	14529	14529					0.054555011462980474
IVMEEPLSQL	10	Unmodified	_IVMEEPLSQL_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8076660037041	2	579.807382	1157.60021	2.3439	0.001359	-1.8026	-0.0010452	0.54128	0.00031384	579.8059184249332	75.848	0.49014	77.142	76.881	77.371	1.2938					47	15	4	0	0	0	0.5476	2	31877	31825;31877		25.399	1.3787	1	13859000	+		12030	10075	6068	6093	14530;14531	14531					0.027715018487015186
IVMELTQFL	9	Unmodified	_IVMELTQFL_					0	0	0			REV__nc|ENSG00000226807|Q6ZUA9|MROH5	REV__nc|ENSG00000226807|Q6ZUA9|MROH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3065063357353	2	547.301736	1092.58892	3.489	0.0019095	0.88961	0.00048688	4.3786	0.0023964	547.3016880105412	91.057	0.55975	92.423	92.186	92.746	1.366					32	17	3	0	0	0	0.51832	1	38313	38313		14.582	2.0501	1	1625900	+		12031	14544	6069	6094	14532	14532					0.04632724545194833
IVNALIQWVLH	11	Unmodified	_IVNALIQWVLH_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MSMS	GG20161007_CRH_Patient100_W632_02	4	653.3904296755791	2	653.387522	1304.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.63	1	113.78	113.28	114.28	0.14912								0	0	0	0.63775	1	49187	49187		1.3295	0	1		+		12032	8789	6070	6095	14533	14533					0.1203021762789831
IVNKPITS	8	Unmodified	_IVNKPITS_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MSMS	GG20161007_CRH_Patient100_A02_01	1	436.2651855349541	2	436.26601	870.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.24	1	104.24	103.74	104.74	0								0	0	0	1.0178	1	43955	43955		4.3292	0	1		+	+	12033	8391	6071	6096	14534	14534					0.07702972902836791
IVNNQIGRI	9	Unmodified	_IVNNQIGRI_					0	0	0		tr|A0A553SIW4|A0A553SIW4_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15635PE=4SV=1	tr|A0A553SIW4|A0A553SIW4_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15635PE=4SV=1	tr|A0A553SIW4|A0A553SIW4_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15635PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.8063842654228	2	513.806365	1025.59818	2.8839	0.0014818	-2.5447	-0.0013075	0.33924	0.0001743	513.8055285901955	80.494	0.66614	81.745	81.513	82.179	1.2512					43	21	3	0	0	0	0.68551	1	33746	33746		7.9102	0.62092	1	6518000			12034	16222	6072	6097	14535	14535					0.08640253945759468
IVPKFKKEKV	10	Unmodified	_IVPKFKKEKV_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.8645202517509	4	304.701046	1214.77508	-0.061363	-1.8697E-05	-0.24708	-7.5287E-05	-0.30845	-9.3984E-05	304.7012203489875	20.855	0.52392	21.066	20.853	21.377	0.21024					19	16	2	0	0	0	0.12557	1	8662	8662		1.5923	0.13716	1	164110			12035	1398	6073	6098	14536	14536					0.17628289776007477
IVPKFKKEKV	10	Unmodified	_IVPKFKKEKV_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.8643066287041	4	304.701046	1214.77508	-0.29962	-9.1296E-05	0.60128	0.00018321	0.30165	9.1914E-05	304.7013203395717	19.377	1.0649	20.901	20.101	21.165	1.5237					61	34	2	0	0	0	0.12557	1	8085	8085		1.5923	0.13716	1	753830			12036	1398	6073	6098	14537	14537					0.17628289776007477
IVQDILRF	8	Unmodified	_IVQDILRF_					0	0	0		ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.3004638552666	2	502.300384	1002.58622	1.5643	0.00078574	-3.2565	-0.0016357	-1.6922	-0.00085001	502.2988734900313	96.241	0.14199	96.241	96.179	96.321	0					6	4	2	0	0	0	0.77833	1	40242	40242		23.148	3.8914	1	1003100			12037	2859	6074	6099	14538	14538					0.08502637202559526
IVQDILRF	8	Unmodified	_IVQDILRF_					0	0	0		ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	502.300384	1002.58622	3.2257	0.0016203	-7.0311	-0.0035317	-3.8054	-0.0019114	502.2970881862806	96.089	0.12721	96.194	96.093	96.22	0.105	0.021332	-0.0014179	NaN	23.148	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513890			12038	2859	6074	6099							0.08502637202559526
IVQDILRF	8	Unmodified	_IVQDILRF_					0	0	0		ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	ENSG00000138823|ENST00000265517|MTTP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.300384	1002.58622	4.093	0.0020559	-6.2272	-0.0031279	-2.1342	-0.001072	502.2977860843613	95.662	0.24535	96.083	95.975	96.22	0.4212	-0.089784	-0.00061034	NaN	23.148	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1710900			12039	2859	6074	6099							0.08502637202559526
IVRKIGSRHA	10	Unmodified	_IVRKIGSRHA_					0	0	0			REV__tr|A0A7D6VTY3|A0A7D6VTY3_9CLOTLonproteaseOS=ClostridiumintestinaleOX=36845GN=lonPE=2SV=1	REV__tr|A0A7D6VTY3|A0A7D6VTY3_9CLOTLonproteaseOS=ClostridiumintestinaleOX=36845GN=lonPE=2SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5722534060478	3	379.57188	1135.69381	1.021	0.00038753	-1.0449	-0.00039663	-0.02397	-9.0982E-06	379.5711961313938	77.468	0.80406	79.219	78.818	79.622	1.7514					36	25	2	0	0	0	0.89803	1	32416	32416		1.4551	0.12547	1	1196200	+		12040	15505	6075	6100	14539	14539					0.1313902685665198
IVRQYLIKI	9	Unmodified	_IVRQYLIKI_					0	0	0		tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5849182009697	3	382.585015	1144.73321	0.65623	0.00025106	0.71496	0.00027353	1.3712	0.00052459	382.58513795789213	55.197	0.51586	56.607	56.422	56.937	1.4099					24	17	2	0	0	0	0.71759	1	23148	23148		6.6304	0.84694	1	1541800			12041	16306	6076	6101	14540	14540					0.16663734087501325
IVRQYLIKI	9	Unmodified	_IVRQYLIKI_					0	0	0		tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	tr|A0A553SKU1|A0A553SKU1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19260PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5852844119072	3	382.585015	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.311	1	55.716	55.216	56.216	1.4048								0	0	0	0.42184	1	22733	22733		6.6304	0.84694	1				12042	16306	6076	6101	14541	14541					0.16663734087501325
IVRWNYSEIIW	11	Unmodified	_IVRWNYSEIIW_					0	0	0			REV__tr|A0A553SUN6|A0A553SUN6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_03835PE=3SV=1	REV__tr|A0A553SUN6|A0A553SUN6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_03835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.5989257693291	3	493.597871	1477.77178	1.6441	0.00081154	-2.0659	-0.0010197	-0.42177	-0.00020818	493.59697674209457	53.213	0.50991	53.213	52.949	53.459	0					45	18	3	0	0	0	1.0362	1	22138	22138		1.3296	0.11481	1	4612400	+		12043	15298	6077	6102	14542	14542					0.05200994931351488
IVRWNYSEIIW	11	Unmodified	_IVRWNYSEIIW_					0	0	0			REV__tr|A0A553SUN6|A0A553SUN6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_03835PE=3SV=1	REV__tr|A0A553SUN6|A0A553SUN6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_03835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.5988342165947	3	493.597871	1477.77178	2.3765	0.001173	-1.7112	-0.00084465	0.66531	0.00032839	493.93118870041906	52.545	0.42833	52.869	52.619	53.047	0.32409					25	14	2	0	0	0	1.0362	1	21948	21948		1.3296	0.55311	1	4019600	+		12044	15298	6077	6102	14543	14543					0.05200994931351488
IVSCAVILD	9	Unmodified	_IVSCAVILD_					0	0	0		tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	932.5164062380791	1	932.512131	931.504854	2.0445	0.0019065	-1.2767	-0.0011906	0.76773	0.00071592	932.511154403829	54.35	0.25319	55.755	55.613	55.867	1.4048					10	7	2	0	0	0	0.11478	1	22760	22760		44.407	8.3628	1	877410			12045	16866	6078	6103	14544	14544					0.03636193448301128
IVSCAVILD	9	Unmodified	_IVSCAVILD_					0	0	0		tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	tr|A0A7D6VSF1|A0A7D6VSF1_9CLOTRibonucleaseHIIOS=ClostridiumintestinaleOX=36845GN=rnhBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	932.512131	931.504854	1.4184	0.0013227	-4.4686	-0.004167	-3.0502	-0.0028443	932.5074595024824	53.853	0.18862	55.823	55.69	55.878	1.9697	0.034019	-0.0013668	NaN	44.407	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	586980			12046	16866	6078	6103							0.03636193448301128
IVSLLEHYSE	10	Unmodified	_IVSLLEHYSE_					0	0	0			REV__tr|A0A553SPT7|A0A553SPT7_NIACIRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_08070PE=4SV=1	REV__tr|A0A553SPT7|A0A553SPT7_NIACIRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_08070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	397.2094604372978	3	397.208161	1188.60265	2.6715	0.0010611	0.77794	0.000309	3.4494	0.0013701	397.2076018041003	88.258	0.37015	88.493	88.291	88.661	0.23471					19	11	2	0	0	0	0.8974	2	36987	36987;37040		1.7423	0.14999	1	2991500	+		12047	15105	6079	6104	14545;14546	14545					0.01589673577996109
IVTSSLLG	8	Unmodified	_IVTSSLLG_					0	0	0		ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.2395507693291	2	395.239461	788.46437	0.61953	0.00024486	0.52446	0.00020729	1.144	0.00045215	395.2397434239448	19.713	0.67289	19.906	19.592	20.265	0.19342					41	21	3	0	0	0	0.74212	3	8175	8175;8227;8286		26.341	0	1	1344000			12048	7482	6080	6105	14547;14548;14549	14547					0.061675951202118995
IVTSSLLG	8	Unmodified	_IVTSSLLG_					0	0	0		ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.2402221560478	2	395.239461	788.46437	0.15573	6.1552E-05	1.6283	0.00064356	1.784	0.00070511	395.2400558827959	18.994	0.56168	20.053	19.85	20.412	1.0585					28	17	2	0	0	0	0.74212	1	7905	7905		26.341	0	1	1100900			12049	7482	6080	6105	14550	14550					0.061675951202118995
IVTSSLLG	8	Unmodified	_IVTSSLLG_					0	0	0		ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.2404662966728	2	395.239461	788.46437	0.18555	7.3339E-05	1.2717	0.00050261	1.4572	0.00057595	395.23992556511075	18.592	0.637	20.04	19.698	20.335	1.448					35	20	3	0	0	0	0.74212	1	7703	7703		26.341	0	1	1027500			12050	7482	6080	6105	14551	14551					0.061675951202118995
IVTSSLLG	8	Unmodified	_IVTSSLLG_					0	0	0		ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	ENST00000590402.1_1_17:66422197-66423441:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	395.239461	788.46437	-0.84084	-0.00033233	2.1049	0.00083192	1.264	0.00049959	395.2402846907268	20.029	0.62109	20.029	19.792	20.413	0	0.021799	0.00049419	NaN	26.341	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3554800			12051	7482	6080	6105							0.061675951202118995
IVVGDVVEL	9	Unmodified	_IVVGDVVEL_					0	0	0		tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7807800173759	2	471.778951	941.543348	3.0341	0.0014314	1.0998	0.00051888	4.134	0.0019503	471.7787571142396	70.215	0.34573	71.568	71.366	71.712	1.3536					16	10	2	0	0	0	0.087207	1	29480	29480		53.576	5.2297	1	1557000			12052	16798	6081	6106	14552	14552					0.070238223544834
IVVGDVVEL	9	Unmodified	_IVVGDVVEL_					0	0	0		tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	471.778951	941.543348	3.0333	0.001431	1.1247	0.00053059	4.1579	0.0019616	471.77855264216	69.677	0.28316	71.53	71.387	71.671	1.853	-0.019282	1.4853E-05	NaN	53.576	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1009500			12053	16798	6081	6106							0.070238223544834
IVVLTQHVNS	10	Unmodified	_IVVLTQHVNS_					0	0	0		tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1109.631030261517	1	1109.63133	1108.62406	1.339	0.0014858	-1.6556	-0.0018371	-0.31667	-0.00035138	1109.6287665719817	103.77	0.15022	103.77	103.69	103.84	0					18	7	4	0	0	0	0.78468	1	43655	43655		13.906	4.5229	1	22824000			12054	16704	6082	6107	14553	14553					0.07409103397367289
IVVPPFLRA	9	Unmodified	_IVVPPFLRA_					0	0	0			REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3245117068291	2	506.32112	1010.62769	3.0853	0.0015621	2.2678	0.0011483	5.3531	0.0027104	506.32316335434496	101.79	0.094727	101.86	101.8	101.89	0.067009					4	2	2	0	0	0	0.84963	1	42621	42621		0.6015	0.076735	1	1251700	+		12055	15116	6083	6108	14554	14554					0.122798179618826
IVVPPFLRA	9	Unmodified	_IVVPPFLRA_					0	0	0			REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	506.32112	1010.62769	1.394	0.00070583	3.7783	0.001913	5.1723	0.0026188	506.323841925264	101.8	0.093399	101.8	101.74	101.83	0	-0.03216	0.0010662	NaN	0.6015	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1469500	+		12056	15116	6083	6108							0.122798179618826
IVVPPFLRA	9	Unmodified	_IVVPPFLRA_					0	0	0			REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	REV__tr|A0A553SQ12|A0A553SQ12_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15825PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	506.32112	1010.62769	3.0853	0.0015621	2.2678	0.0011483	5.3531	0.0027104	506.32316335434496	101.79	0.094727	101.86	101.8	101.89	0.067009	0.03216	-0.00046332	NaN	0.6015	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1251700	+		12057	15116	6083	6108							0.122798179618826
IVVVILRRGWS	11	Unmodified	_IVVVILRRGWS_					0	0	0		sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2;sp|F5HFH0|US15_HCMVMMembraneproteinUS15OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US15PE=3SV=1	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2777892947197	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.071	1	87.315	86.815	87.815	0.24387								0	0	0	0.63775	1	36494	36494		0.45452	0.31463	1				12058	15982	6084	6109	14555	14555					0.16649612756123133
IVVVILRRGWS	11	Unmodified	_IVVVILRRGWS_					0	0	0		sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2;sp|F5HFH0|US15_HCMVMMembraneproteinUS15OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US15PE=3SV=1	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2783996462822	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.204	1	87.448	86.948	87.948	0.24387								0	0	0	0.63775	1	36561	36561		0.45452	0.31463	1				12059	15982	6084	6109	14556	14556					0.16649612756123133
IVVVILRRGWS	11	Unmodified	_IVVVILRRGWS_					0	0	0		sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2;sp|F5HFH0|US15_HCMVMMembraneproteinUS15OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US15PE=3SV=1	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2781860232353	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.443	1	87.569	87.069	88.069	1.1265								0	0	0	0.63775	1	36421	36421		0.45452	0.31463	1				12060	15982	6084	6109	14557	14557					0.16649612756123133
IVVVKVLLLR	10	Unmodified	_IVVVKVLLLR_					0	0	0		ADAMTS15|p.D340Afs*10|1|0.12|ENSG00000166106|chr11:130461549-130461550|-/C|frameshift_variant;ENSG00000166106|ENST00000299164|ADAMTS15	ADAMTS15|p.D340Afs*10|1|0.12|ENSG00000166106|chr11:130461549-130461550|-/C|frameshift_variant	ADAMTS15|p.D340Afs*10|1|0.12|ENSG00000166106|chr11:130461549-130461550|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.4156371951103	2	576.415552	1150.81655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.79	1	102.79	102.29	103.29	0								0	0	0	0.66237	1	43087	43087		0.45834	0	1				12061	22	6085	6110	14558	14558					0.24717470535347275
IVYHWMKWLRR	11	Unmodified	_IVYHWMKWLRR_					0	0	0		nc|ENSG00000163125|Q5VT52-5|RPRD2;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;ENSG00000163125|ENST00000369068|RPRD2;nc|ENSG00000163125|Q5VT52-4|RPRD2	nc|ENSG00000163125|Q5VT52-5|RPRD2	nc|ENSG00000163125|Q5VT52-5|RPRD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.9655639529228	3	529.962491	1586.86564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.731	1	24.972	24.472	25.472	1.241								0	0	0	0.63775	1	9923	9923		0.45452	0.37117	1				12062	3665	6086	6111	14559	14559					0.09568435552637311
IVYINEVCVL	10	Unmodified	_IVYINEVCVL_					0	0	0		MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant;nc|ENSG00000187391|Q86UL8-2|MAGI2;ENSG00000187391|ENST00000354212|MAGI2;MAGI2|p.V472L|1|0.06|ENSG00000187391|chr7:78256576-78256576|C/G|missense_variant;ENST00000520379.2_1_7:77814916-78119132:-|nuORF	MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant	MAGI2|p.S673Tfs*9|1|0.03|ENSG00000187391|chr7:78255972-78255973|-/CTTACATTGGTGAGTGTTGTGG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	582.2794067263603	2	582.820292	1163.62603	1.521	0.0008865	-1.5975	-0.00093106	-0.076458	-4.4561E-05	582.8190763044927	66.499	0.40697	68.388	68.15	68.557	1.8889					35	12	4	0	0	0	0.12484	1	27809	27809		7.2892	0	1	5611300			12063	4823	6087	6112	14560	14560					0.05076396090976232
IWCGAHYI	8	Unmodified	_IWCGAHYI_					0	0	0		ENST00000556833.1_1_14:21899990-21924223:-|nuORF	ENST00000556833.1_1_14:21899990-21924223:-|nuORF	ENST00000556833.1_1_14:21899990-21924223:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7296020388603	2	481.73128	961.448008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.301	1	59.301	58.801	59.801	0								0	0	0	1.0178	1	24727	24727		2.8892	0.31174	1				12064	7308	6088	6113	14561	14561					-0.03425809317570838
IWFKHFEHM	9	Unmodified	_IWFKHFEHM_					0	0	0			REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	637.8137695193291	2	637.810593	1273.60663	2.1995	0.0014029	3.8005	0.002424	6.0001	0.0038269	637.8122600495045	80.68	0.21874	80.68	80.51	80.728	0					10	6	2	0	0	0	0.85019	1	33595	33595		0.52476	0.066424	1	365630	+		12065	9303	6089	6114	14562	14562					-0.019225154092964658
IWFKHFEHM	9	Unmodified	_IWFKHFEHM_					0	0	0			REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	REV__nc|ENSG00000110675|Q8N336-2|ELMOD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	637.810593	1273.60663	2.1995	0.0014029	3.8005	0.002424	6.0001	0.0038269	637.8122600495045	80.68	0.21874	80.68	80.51	80.728	0	0	0	NaN	0.52476	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365630	+		12066	9303	6089	6114							-0.019225154092964658
IWGKLCKGKT	10	Unmodified	_IWGKLCKGKT_					0	0	0			REV__L1MA2_dup2906|chr7:66156639-66156788:+|1.1730803632367288|0.2101340047066172|2.48|429.0|3|2|sense	REV__L1MA2_dup2906|chr7:66156639-66156788:+|1.1730803632367288|0.2101340047066172|2.48|429.0|3|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3301879763603	2	567.328619	1132.64269	1.8389	0.0010433	2.9248	0.0016593	4.7637	0.0027026	567.330149483754	72.639	1.5212	72.964	71.85	73.371	0.32494					110	47	3	0	0	0	0.87699	1	30441	30441		3.9444	0.66309	1	2390700	+		12067	14265	6090	6115	14563	14563					0.08166941767581193
IWHGIGPLI	9	Unmodified	_IWHGIGPLI_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3009521365166	2	503.297645	1004.58074	1.2001	0.00060403	1.7333	0.00087235	2.9334	0.0014764	503.2987674433238	66.799	0.27074	68.688	68.527	68.797	1.8889					13	8	2	0	0	0	0.16975	1	28037	28037		36.466	10.125	1	1150200	+		12068	9163	6091	6116	14564	14564					0.07862958410760257
IWHGIGPLI	9	Unmodified	_IWHGIGPLI_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	503.297645	1004.58074	1.9873	0.0010002	4.0126	0.0020195	5.9999	0.0030197	503.3001170265404	67.351	0.21414	68.729	68.575	68.789	1.3778	0.020321	0.0011041	NaN	36.466	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1084200	+		12069	9163	6091	6116							0.07862958410760257
IWHGIGPLI	9	Unmodified	_IWHGIGPLI_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	503.297645	1004.58074	1.2001	0.00060403	1.7333	0.00087235	2.9334	0.0014764	503.2987674433238	66.799	0.27074	68.688	68.527	68.797	1.8889	-0.020321	-0.0011902	NaN	36.466	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1150200	+		12070	9163	6091	6116							0.07862958410760257
IWHIFKWQPIR	11	Unmodified	_IWHIFKWQPIR_					0	0	0		ENST00000417811.2_3_7:32674948-32715621:-|nuORF	ENST00000417811.2_3_7:32674948-32715621:-|nuORF	ENST00000417811.2_3_7:32674948-32715621:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2890807986259	3	508.625984	1522.85612	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.945	1	53.945	53.445	54.445	0								0	0	0	0.63775	1	22489	22489		0.094841	0.011491	1				12071	6419	6092	6117	14565	14565					0.1156099053878279
IWIESVIEKF	10	Unmodified	_IWIESVIEKF_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.3538696169853	2	632.352814	1262.69108	1.1017	0.00069665	-0.80855	-0.00051129	0.29313	0.00018536	632.3526438851997	83.922	0.39503	85.109	84.858	85.253	1.1879					27	12	3	0	0	0	0.045734	2	35183	35183;35233		80.676	44.549	1	1827400			12072	2402	6093	6118	14566;14567	14566					0.07023713888474958
IWIESVIEKF	10	Unmodified	_IWIESVIEKF_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.8538696169853	2	632.352814	1262.69108	1.2843	0.00081214	-1.122	-0.0007095	0.1623	0.00010263	632.3537906876602	83.373	0.37161	85.011	84.823	85.195	1.6379					22	11	3	0	0	0	0.051944	2	34981	34937;34981		78.06	41.933	1	2243400			12073	2402	6093	6118	14568;14569	14569					0.07023713888474958
IWKLLITIHD	10	Unmodified	_IWKLLITIHD_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9216491580009	3	417.920174	1250.73869	1.4415	0.00060245	1.255	0.00052447	2.6965	0.0011269	417.9210722945827	31.198	0.45229	31.489	31.239	31.691	0.29086					34	14	4	0	0	0	0.89803	1	13098	13098		0.69767	0	1	2512600			12074	5413	6094	6119	14570	14570					0.12335412879338037
IWKLLITIHD	10	Unmodified	_IWKLLITIHD_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6924621462822	4	313.69195	1250.73869	0.084014	2.6354E-05	1.4441	0.000453	1.5281	0.00047936	313.6923345218594	28.733	0.81334	30.532	30.206	31.02	1.7987					89	26	5	0	0	0	0.89803	1	12009	12009		0.69767	0	1	20859000			12075	5413	6094	6119	14571	14571					0.12335412879338037
IWKVKFFTIT	10	Unmodified	_IWKVKFFTIT_					0	0	0			REV__nc|ENSG00000211893|P01859|IGHG2	REV__nc|ENSG00000211893|P01859|IGHG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8835937380791	2	641.881542	1281.74853	1.6317	0.0010473	2.1279	0.0013659	3.7596	0.0024132	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	0.89803	1	33026	33026		1.6526	1.0511	1	3189400	+		12076	14534	6095	6120	14572	14572					0.11892600884698368
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.5479919314384	3	342.546671	1024.61818	0.63041	0.00021594	2.3948	0.00082033	3.0252	0.0010363	342.5473931725352	29.3	0.48449	29.58	29.38	29.865	0.27929					41	15	3	0	0	0	0.88587	2	12257	12257;12308		3.5965	1.098	1	4027000	+		12077	10906	6096	6121	14573;14574	14573					0.10686049676360199
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.5475646853447	3	342.546671	1024.61818	0.80839	0.00027691	1.2102	0.00041456	2.0186	0.00069147	342.5469096458078	32.568	0.72196	32.862	32.528	33.25	0.29431					44	24	2	0	0	0	0.88587	1	13724	13724		3.5965	1.098	1	2855000	+		12078	10906	6096	6121	14575	14575					0.10686049676360199
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.1993286013603	3	342.546671	1024.61818	0.2367	8.1081E-05	1.2657	0.00043357	1.5024	0.00051465	342.54680876142646	22.081	0.17417	22.304	22.173	22.347	0.223					9	5	2	0	0	0	2.3239	1	9153	9153		1.6526	0.58116	1	415730	+		12079	10906	6096	6121	14576	14576					0.10686049676360199
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.5475341677666	3	342.546671	1024.61818	-0.33639	-0.00011523	3.0382	0.0010407	2.7018	0.00092548	342.5475584162436	20.736	0.41985	21.862	21.682	22.102	1.1254					21	13	2	0	0	0	0.88055	1	8647	8647		6.2058	3.7073	1	825190	+		12080	10906	6096	6121	14577	14577					0.10686049676360199
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8819763064384	3	342.546671	1024.61818	-0.57422	-0.0001967	2.7578	0.00094467	2.1836	0.00074797	342.5473478627651	31.536	0.76387	32.818	32.438	33.202	1.2813					58	24	3	0	0	0	0.88587	1	13251	13251		3.5965	1.098	1	2695500	+		12081	10906	6096	6121	14578	14578					0.10686049676360199
IWLKRNVP	8	Unmodified	_IWLKRNVP_					0	0	0			REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	REV__nc|ENSG00000168386|Q4L180-6|FILIP1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	343.1990844607353	3	342.546671	1024.61818	-0.33639	-0.00011523	3.0382	0.0010407	2.7018	0.00092548	342.5475584162436	20.736	0.41985	21.862	21.682	22.102	1.1254					21	13	2	0	0	0	2.3239	1	8669	8669		3.5965	1.098	1	825190	+		12082	10906	6096	6121	14579	14579					0.10686049676360199
IWLKTLLRFL	10	Unmodified	_IWLKTLLRFL_					0	0	0			REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.9497253298759	3	434.948064	1301.82236	3.0945	0.001346	1.0748	0.00046746	4.1693	0.0018134	434.9484506115308	94.287	0.56651	94.432	94.165	94.731	0.14493					44	17	4	0	0	0	0.89803	1	39507	39507		0.62683	0	1	9195900	+		12083	11148	6097	6122	14580	14580					0.18352569047033285
IWLLYFGNYYY	11	Unmodified	_IWLLYFGNYYY_					0	0	0			REV__nc|ENSG00000165046|Q2VYF4-3|LETM2	REV__nc|ENSG00000165046|Q2VYF4-3|LETM2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	505.5477783083916	3	505.583339	1513.72819	0.7768	0.00039273	-3.712	-0.0018767	-2.9352	-0.001484	505.5821012565498	15.943	0.15459	15.943	15.87	16.024	0					6	4	2	0	0	0	0.14606	1	6643	6643		0.50596	0.051438	1	154850	+		12084	10762	6098	6123	14581	14581					-0.008126145657342931
IWLYRHRKKR	10	Unmodified	_IWLYRHRKKR_					0	0	0		ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant;nc|ENSG00000169855|Q9Y6N7-6|ROBO1;nc|ENSG00000169855|Q9Y6N7-5|ROBO1;nc|ENSG00000169855|Q9Y6N7-4|ROBO1;nc|ENSG00000169855|Q9Y6N7-3|ROBO1;ENSG00000169855|ENST00000464233|ROBO1;nc|ENSG00000169855|Q9Y6N7-2|ROBO1	ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9672729372978	3	485.965112	1454.87351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.901	1	15.014	14.514	15.514	0.11295								0	0	0	0.66227	1	6184	6184		0.62683	0.21856	1				12085	4115	6099	6124	14582	14582					0.1642633086441947
IWPGGVLPKF	10	Unmodified	_IWPGGVLPKF_					0	0	0		ENSG00000120451|ENST00000265909|SNX19;ENST00000580193.1_1_18:14630000-14630792:-|nuORF;ENST00000444901.1_1_21:14899938-14900730:+|nuORF	ENSG00000120451|ENST00000265909|SNX19	ENSG00000120451|ENST00000265909|SNX19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8299438357353	2	557.326402	1112.63825	2.1726	0.0012108	1.461	0.00081424	3.6336	0.0020251	557.8288483671593	68.579	1.3059	69.945	69.511	70.817	1.3657					106	42	5	0	0	0	0.35292	5	28828	28676;28722;28775;28828;28896		36.127	16.55	1	3953400			12086	2105	6100	6125	14583;14584;14585;14586;14587	14586					0.0864380061632346
IWPGGVLPKF	10	Unmodified	_IWPGGVLPKF_					0	0	0		ENSG00000120451|ENST00000265909|SNX19;ENST00000580193.1_1_18:14630000-14630792:-|nuORF;ENST00000444901.1_1_21:14899938-14900730:+|nuORF	ENSG00000120451|ENST00000265909|SNX19	ENSG00000120451|ENST00000265909|SNX19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3286620974541	2	557.326402	1112.63825	2.1396	0.0011924	1.518	0.00084603	3.6576	0.0020385	557.8287388856219	68.028	1.0858	69.898	69.458	70.544	1.87					89	34	4	0	0	0	0.25819	5	28510	28414;28463;28510;28564;28620		41.84	20.093	1	3750600			12087	2105	6100	6125	14588;14589;14590;14591;14592	14590					0.0864380061632346
IWPKKGTAVF	10	Unmodified	_IWPKKGTAVF_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8389160037041	2	573.837134	1145.65972	0.69462	0.0003986	1.7677	0.0010144	2.4623	0.001413	573.8379120495684	31.142	0.69042	32.423	31.995	32.686	1.2813					32	21	2	0	0	0	0.74074	1	13061	13061		19.257	4.6753	1	778670			12088	886	6101	6126	14593	14593					0.09271185645025071
IWPKKGTAVFW	11	Unmodified	_IWPKKGTAVFW_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1206542849541	3	444.920286	1331.73903	2.252	0.001002	0.2765	0.00012302	2.5285	0.001125	444.9202647245353	49.625	2.3582	51.016	49.807	52.165	1.3911					168	75	3	0	0	0	0.14606	1	20497	20497		1.4551	0.67859	1	2670100			12089	886	6102	6127	14594	14594					0.0864283259916192
IWPKKGTAVFW	11	Unmodified	_IWPKKGTAVFW_					0	0	0		ENSG00000072682|ENST00000360568|P4HA2;nc|ENSG00000072682|O15460|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	ENSG00000072682|ENST00000360568|P4HA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1201049685478	3	444.920286	1331.73903	2.0078	0.0008933	0.38943	0.00017327	2.3972	0.0010666	444.92029834612794	48.735	2.4126	50.712	49.837	52.25	1.9772					202	77	3	0	0	0	0.14606	1	20251	20251		1.4551	0.67859	1	2503300			12090	886	6102	6127	14595	14595					0.0864283259916192
IWRAIQEASFG	11	Unmodified	_IWRAIQEASFG_					0	0	0			REV__ENST00000476168.1_1_X:77112151-77150907:-|nuORF	REV__ENST00000476168.1_1_X:77112151-77150907:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	427.1949035525322	3	426.559417	1276.65642	1.2403	0.00052904	-0.50194	-0.00021411	0.73832	0.00031494	426.5591453094056	92.49	0.42467	92.49	92.228	92.653	0					24	13	2	0	0	0	0.14606	1	38677	38677		1.2148	0.4383	1	2087800	+		12091	9061	6103	6128	14596	14596					0.029158908003410033
IWRERRRLP	9	Unmodified	_IWRERRRLP_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	641.3187744021416	2	641.38618	1280.75781	5.131	0.0032909	-1.6519	-0.0010595	3.4791	0.0022314	641.3855827825261	88.329	0.22601	89.385	89.24	89.466	1.0562					9	6	2	0	0	0	0.11898	1	37214	37214		2.3027	0	1	616080			12092	5630	6104	6129	14597	14597					0.12865807013599806
IWRERRRLP	9	Unmodified	_IWRERRRLP_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	641.38618	1280.75781	2.6915	0.0017263	-1.465	-0.00093965	1.2265	0.00078664	641.3848022877828	89.099	0.28558	89.099	88.988	89.274	0	-0.12357	0.00015601	NaN	2.3027	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	688170			12093	5630	6104	6129							0.12865807013599806
IWRERRRLP	9	Unmodified	_IWRERRRLP_					0	0	0		ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	ENST00000262113.8_1_8:2026969-2037879:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	641.38618	1280.75781	2.5248	0.0016194	-1.6723	-0.0010726	0.85249	0.00054677	641.3854302181174	88.96	0.29046	89.184	89.036	89.327	0.2236	-0.03864	-0.00010992	NaN	2.3027	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377030			12094	5630	6104	6129							0.12865807013599806
IWRRVRKKFFQ	11	Unmodified	_IWRRVRKKFFQ_					0	0	0			REV__ENSG00000118515|ENST00000367858|SGK1	REV__ENSG00000118515|ENST00000367858|SGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	522.8038207888603	3	521.984283	1562.93102	2.7995	0.0014613	2.6584	0.0013877	5.4579	0.0028489	521.9853313735074	90.191	1.0418	90.4	89.825	90.866	0.20903					63	32	3	0	0	0	0.14606	1	37843	37843		0.094841	0.094841	1	746320	+		12095	9522	6105	6130	14598	14598					0.1720717307000541
IWRRVRKKFFQ	11	Unmodified	_IWRRVRKKFFQ_					0	0	0			REV__ENSG00000118515|ENST00000367858|SGK1	REV__ENSG00000118515|ENST00000367858|SGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.8044311404228	3	521.984283	1562.93102	4.611	0.0024069	3.7016	0.0019322	8.3126	0.004339	521.985338967081	89.153	0.78545	90.558	90.201	90.986	1.4045					33	24	2	0	0	0	0.14606	1	37532	37532		0.094841	0	1	420260	+		12096	9522	6105	6130	14599	14599					0.1720717307000541
IWYSCPLI	8	Unmodified	_IWYSCPLI_					0	0	0			REV__ENST00000331710.9_1_12:64868080-64868131:+|nuORF	REV__ENST00000331710.9_1_12:64868080-64868131:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1747619509697	3	332.173735	993.499375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.127	1	59.545	59.045	60.045	1.4181								0	0	0	1.0178	1	24371	24371		1.8442	0.36234	1		+		12097	12447	6106	6131	14600	14600					0.0023651465648981684
IYAAKKHMK	9	Unmodified	_IYAAKKHMK_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;nc|ENSG999|O00370|L1_ORF2;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|9|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|161|3|sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|163|3|sense;L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|81|3|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3170043826103	2	545.315512	1088.61647	1.3153	0.00071727	1.8825	0.0010265	3.1978	0.0017438	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.82604	1	29162	29162		2.3027	0.65011	1	2013200			12098	7674	6107	6132	14601	14601					0.07570672596102668
IYAAKKHMK	9	Unmodified	_IYAAKKHMK_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;nc|ENSG999|O00370|L1_ORF2;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|9|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|161|3|sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|163|3|sense;L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|81|3|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3176147341728	2	545.315512	1088.61647	1.5524	0.00084657	3.2263	0.0017593	4.7787	0.0026059	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.82604	1	30877	30877		2.3027	0.4585	1	3210400			12099	7674	6107	6132	14602	14602					0.07570672596102668
IYAALQRMLV	10	Unmodified	_IYAALQRMLV_					0	0	0		ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	ENSG00000165449|ENST00000395348|SLC16A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3448974490166	2	589.341726	1176.6689	2.6941	0.0015878	2.2489	0.0013254	4.943	0.0029131	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.89803	1	32157	32157		1.8442	1.4435	1	8587800			12100	3839	6108	6133	14603	14603					0.08763210939059718
IYACWNKNR	9	Unmodified	_IYACWNKNR_					0	0	0			REV__ENSG00000132205|ENST00000254528|EMILIN2	REV__ENSG00000132205|ENST00000254528|EMILIN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.8411132693291	2	584.290025	1166.5655	2.0948	0.0012239	-2.2426	-0.0013103	-0.14782	-8.637E-05	584.2877020539881	47.775	0.43487	49.157	49.017	49.452	1.3825					33	13	3	0	0	0	0.11684	1	19974	19974		7.9102	3.9658	1	2734200	+		12101	9840	6109	6134	14604	14604					-0.011122764487481618
IYADNQVMHF	10	Unmodified	_IYADNQVMHF_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;POLE|p.N1811K|1|0.06|ENSG00000177084|chr12:132639244-132639244|G/T|missense_variant	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.2901489138603	2	619.287148	1236.55974	1.6105	0.00099736	0.43259	0.0002679	2.0431	0.0012653	619.2877275623555	42.233	0.25589	43.573	43.444	43.7	1.3399					20	7	4	0	0	0	0.49886	1	17708	17708		27.629	15.097	1	639940			12102	4433	6110	6135	14605	14605					-0.04907419751089037
IYADNQVMHF	10	Unmodified	_IYADNQVMHF_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF;POLE|p.N1811K|1|0.06|ENSG00000177084|chr12:132639244-132639244|G/T|missense_variant	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	619.287148	1236.55974	1.4641	0.00090668	0.15458	9.5728E-05	1.6186	0.0010024	619.287455935045	41.736	0.32259	43.629	43.444	43.767	1.8927	0.028094	-7.7114E-05	NaN	27.629	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	939110			12103	4433	6110	6135							-0.04907419751089037
IYAIINLWFL	10	Unmodified	_IYAIINLWFL_					0	0	0			REV__tr|A0A553SFT1|A0A553SFT1_NIACIM48familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09450PE=3SV=1	REV__tr|A0A553SFT1|A0A553SFT1_NIACIM48familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_09450PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3701660037041	2	633.368267	1264.72198	2.1393	0.001355	2.0679	0.0013098	4.2072	0.0026647	633.3694890417619	80.137	0.77713	80.137	79.795	80.572	0					49	24	3	0	0	0	0.87343	1	33308	33308		4.3292	0.73274	1	1434600	+		12104	14718	6111	6136	14606	14606					0.10020911993342452
IYALDSLLI	9	Unmodified	_IYALDSLLI_					0	0	0			REV__ENSG00000173302|ENST00000309926|GPR148	REV__ENSG00000173302|ENST00000309926|GPR148	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8052856326103	2	510.802426	1019.5903	2.5217	0.0012881	1.8852	0.00096295	4.4069	0.0022511	510.8034152269941	78.781	0.37148	80.516	80.35	80.722	1.735					19	11	2	0	0	0	0.098957	1	33040	33040		49.669	7.5744	1	1223400	+		12105	11094	6112	6137	14607	14607					0.08128681905623125
IYALDSLLI	9	Unmodified	_IYALDSLLI_					0	0	0			REV__ENSG00000173302|ENST00000309926|GPR148	REV__ENSG00000173302|ENST00000309926|GPR148	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	510.802426	1019.5903	3.1025	0.0015848	0.89239	0.00045583	3.9949	0.0020406	510.8033287196041	79.253	0.34349	80.52	80.347	80.691	1.2668	0.0020371	-0.0003808	NaN	49.669	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1347800	+		12106	11094	6112	6137							0.08128681905623125
IYALDSLLI	9	Unmodified	_IYALDSLLI_					0	0	0			REV__ENSG00000173302|ENST00000309926|GPR148	REV__ENSG00000173302|ENST00000309926|GPR148	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	510.802426	1019.5903	2.5217	0.0012881	1.8852	0.00096295	4.4069	0.0022511	510.8034152269941	78.781	0.37148	80.516	80.35	80.722	1.735	-0.0020371	0.00063343	NaN	49.669	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1223400	+		12107	11094	6112	6137							0.08128681905623125
IYAPKLQEF	9	Unmodified	_IYAPKLQEF_					0	0	0		ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8069946169853	2	554.8055	1107.59645	2.5567	0.0014184	-0.18441	-0.00010231	2.3722	0.0013161	554.8055086917768	44.678	0.53308	46.043	45.836	46.369	1.3653					42	16	4	0	0	0	0.00020031	2	18704	18704;18754		142.08	85.903	1	9946200			12108	4366	6113	6138	14608;14609	14608					0.04695200137143729
IYAPKLQEF	9	Unmodified	_IYAPKLQEF_					0	0	0		ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	ENSG00000175305|ENST00000308108|CCNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8065063357353	2	554.8055	1107.59645	2.1904	0.0012152	0.19916	0.0001105	2.3896	0.0013257	554.8056525500191	44.124	0.56718	46.068	45.799	46.366	1.9438					44	17	4	0	0	0	0.0069529	3	18513	18428;18473;18513		114.65	53.292	1	9010700			12109	4366	6113	6138	14610;14611;14612	14612					0.04695200137143729
IYAPPLPSL	9	Unmodified	_IYAPPLPSL_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	970.5623657107353	1	970.560795	969.553519	1.4392	0.0013968	1.0368	0.0010063	2.476	0.0024031	970.5610905713082	71.891	0.31146	73.233	73.03	73.342	1.3415					15	9	2	0	0	0	0.069258	2	30158	30158;30210		60.39	31.308	1	1962400			12110	2126	6114	6139	14613;14614	14613					0.06752430079700389
IYAPPLPSL	9	Unmodified	_IYAPPLPSL_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7849914431572	2	485.784036	969.553519	1.8551	0.00090117	0.2037	9.8953E-05	2.0588	0.0010001	485.7838730725921	71.837	0.8082	73.179	72.658	73.467	1.3415					48	25	3	0	0	0	0.02596	1	30189	30189		93.883	52.044	1	4750300			12111	2126	6114	6139	14615	14615					0.06752430079700389
IYAPPLPSL	9	Unmodified	_IYAPPLPSL_					0	0	0		ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	ENSG00000121057|ENST00000337714|AKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7843505740166	2	485.784036	969.553519	1.6534	0.00080321	-0.45505	-0.00022105	1.1984	0.00058215	485.78358941202924	71.382	0.56466	73.206	72.88	73.445	1.824					41	17	4	0	0	0	0.010702	1	29967	29967		106.85	48.167	1	5195500			12112	2126	6114	6139	14616	14616					0.06752430079700389
IYAQAKCMSL	10	Unmodified	_IYAQAKCMSL_					0	0	0			REV__USP44|p.T661_C666del|1|0.42|ENSG00000136014|chr12:95518294-95518311|TGCATACTTCATCCATAG/-|inframe_deletion	REV__USP44|p.T661_C666del|1|0.42|ENSG00000136014|chr12:95518294-95518311|TGCATACTTCATCCATAG/-|inframe_deletion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2820312380791	2	564.28302	1126.55149	2.002	0.0011297	-3.7407	-0.0021108	-1.7387	-0.00098111	564.2804815396423	54.339	0.40245	56.308	56.064	56.467	1.9684					22	12	2	0	0	0	0.62746	1	22720	22720		21.747	2.3847	1	1943300	+		12113	15931	6115	6140	14617	14617					-0.006726899920749929
IYDIQKKMVK	10	Unmodified	_IYDIQKKMVK_					0	0	0			REV__tr|A0A553SRZ0|A0A553SRZ0_NIACILipidIIflippaseAmjOS=NialliacirculansOX=1397GN=amjPE=3SV=1	REV__tr|A0A553SRZ0|A0A553SRZ0_NIACILipidIIflippaseAmjOS=NialliacirculansOX=1397GN=amjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3681518435478	2	633.367941	1264.72133	2.0542	0.001301	1.0832	0.00068609	3.1374	0.0019871	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	0.89803	1	32841	32841		1.4819	0	1	2722600	+		12114	15183	6116	6141	14618	14618					0.09955749281994031
IYDIQKKMVK	10	Unmodified	_IYDIQKKMVK_					0	0	0			REV__tr|A0A553SRZ0|A0A553SRZ0_NIACILipidIIflippaseAmjOS=NialliacirculansOX=1397GN=amjPE=3SV=1	REV__tr|A0A553SRZ0|A0A553SRZ0_NIACILipidIIflippaseAmjOS=NialliacirculansOX=1397GN=amjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3701049685478	2	633.367941	1264.72133	2.1393	0.001355	2.5826	0.0016357	4.7219	0.0029907	633.3694890417619	80.137	0.77713	80.137	79.795	80.572	0					49	24	3	0	0	0	0.89803	1	33465	33465		1.4819	0.8804	1	1434600	+		12115	15183	6116	6141	14619	14619					0.09955749281994031
IYDKFIAQL	9	Unmodified	_IYDKFIAQL_					0	0	0		nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8152953982353	2	555.813325	1109.6121	1.1052	0.00061427	1.5504	0.00086174	2.6556	0.001476	555.8138193972397	55.455	0.31952	56.865	56.675	56.995	1.4099					26	10	3	0	0	0	0.019071	2	23186	23186;23232		100.09	43.914	1	12838000			12116	3574	6117	6142	14620;14621	14620					0.061674866541807205
IYDKFIAQL	9	Unmodified	_IYDKFIAQL_					0	0	0		nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;nc|ENSG00000160783|Q6P1K2-4|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8144409060478	2	555.813325	1109.6121	0.55223	0.00030694	2.1322	0.0011851	2.6844	0.001492	555.8143419418936	54.962	0.32557	56.931	56.751	57.076	1.9684					24	10	3	0	0	0	0.010388	2	23049	23003;23049		107.1	50.923	1	9870700			12117	3574	6117	6142	14622;14623	14623					0.061674866541807205
IYDLFRKRK	9	Unmodified	_IYDLFRKRK_					0	0	0		ENSG00000230178|ENST00000456475|OR4F3;ENSG00000176269|ENST00000320901|OR4F21	ENSG00000230178|ENST00000456475|OR4F3	ENSG00000230178|ENST00000456475|OR4F3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1341735720634	4	310.439658	1237.72953	-0.13169	-4.088E-05	0.18134	5.6296E-05	0.049656	1.5415E-05	310.43973902939246	23.233	0.69484	24.884	24.686	25.38	1.6511					60	22	3	0	0	0	0.11812	1	9820	9820		0.23584	0.095952	1	3788700			12118	4404	6118	6143	14624	14624					0.1201706431365892
IYDPVHFKTF	10	Unmodified	_IYDPVHFKTF_					0	0	0		ENST00000481435.5_1_3:169693473-169703658:+|nuORF;ENSG00000008952|ENST00000337002|SEC62	ENST00000481435.5_1_3:169693473-169703658:+|nuORF	ENST00000481435.5_1_3:169693473-169703658:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	422.8899719119072	3	422.888763	1265.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.147	1	46.512	46.012	47.012	1.3653								0	0	0	0.5998	1	18919	18919		21.241	13.764	1				12119	536	6119	6144	14625	14625					0.022262740571704853
IYDTLIWSF	9	Unmodified	_IYDTLIWSF_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000498157.1_1_1:109813457-109813919:+|nuORF;ENST00000489018.1_1_1:109813196-109815028:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.2991821169853	2	579.297507	1156.58046	4.0638	0.0023541	-0.24168	-0.00014001	3.8221	0.0022141	579.2975061353368	93.576	0.44744	94.448	94.226	94.674	0.87176					29	13	3	0	0	0	0.069258	2	39356	39356;39411		60.39	31.903	1	1840500			12120	3015	6120	6145	14626;14627	14626					0.008434939002199826
IYDTLIWSF	9	Unmodified	_IYDTLIWSF_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2;ENST00000498157.1_1_1:109813457-109813919:+|nuORF;ENST00000489018.1_1_1:109813196-109815028:+|nuORF	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3010742068291	2	579.297507	1156.58046	3.2337	0.0018733	1.6254	0.00094161	4.8591	0.0028149	579.2982795995181	93.109	0.38284	94.386	94.197	94.58	1.277					28	11	3	0	0	0	0.051699	2	39208	39161;39208		67.344	31.903	1	1505200			12121	3015	6120	6145	14628;14629	14629					0.008434939002199826
IYDTSTDRLLW	11	Unmodified	_IYDTSTDRLLW_					0	0	0		ISG20-UBA2|1|fusion;ENSG00000172183|ENST00000306072|ISG20;ENST00000558942.5_1_15:89195091-89198759:+|nuORF	ISG20-UBA2|1|fusion	ISG20-UBA2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	691.8513061404228	2	691.851167	1381.68778	0.8917	0.00061692	0.19295	0.00013349	1.0846	0.00075042	691.8515158541703	56.638	0.33649	58.053	57.847	58.183	1.4145					25	10	3	0	0	0	0.026793	2	23705	23705;23749		89.609	49.659	1	3723600			12122	7660	6121	6146	14630;14631	14630					0.012204190437842044
IYDTSTDRLLW	11	Unmodified	_IYDTSTDRLLW_					0	0	0		ISG20-UBA2|1|fusion;ENSG00000172183|ENST00000306072|ISG20;ENST00000558942.5_1_15:89195091-89198759:+|nuORF	ISG20-UBA2|1|fusion	ISG20-UBA2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	691.8518554568291	2	691.851167	1381.68778	0.50285	0.0003479	-0.070445	-4.8738E-05	0.43241	0.00029916	691.8509177361971	56.051	0.36914	58.019	57.841	58.21	1.9684					30	11	3	0	0	0	0.026793	2	23509	23509;23559		89.609	43.909	1	3096100			12123	7660	6121	6146	14632;14633	14632					0.012204190437842044
IYEAYFHW	8	Unmodified	_IYEAYFHW_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|343|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|343|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|343|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.7621337771416	2	564.761092	1127.50763	2.3305	0.0013162	-0.39899	-0.00022534	1.9315	0.0010908	564.7608356429789	75.55	0.33916	75.872	75.71	76.049	0.32163					30	10	4	0	0	0	0.88409	1	31633	31633		6.3541	1.1234	1	1830900			12124	7749	6122	6147	14634	14634					-0.051022151025335916
IYEEEPFNF	9	Unmodified	_IYEEEPFNF_					0	0	0		ENST00000481488.1_1_2:148695657-148695951:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4;ENSG00000115947|ENST00000392857|ORC4;CON__Q2YDI2	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.2675048708916	2	594.266404	1186.51826	3.1998	0.0019015	-1.0758	-0.00063928	2.1241	0.0012623	594.2655450659025	64.453	0.33759	65.86	65.71	66.047	1.4071					26	10	3	0	0	0	0.042029	2	27021	27021;27074		74.423	49.023	1	2328800		+	12125	356	6123	6148	14635;14636	14635					-0.06754277238746909
IYEEEPFNF	9	Unmodified	_IYEEEPFNF_					0	0	0		ENST00000481488.1_1_2:148695657-148695951:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4;ENSG00000115947|ENST00000392857|ORC4;CON__Q2YDI2	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.2673217654228	2	594.266404	1186.51826	2.9168	0.0017334	-0.50995	-0.00030305	2.4069	0.0014303	594.2661684410476	63.976	0.37291	65.904	65.704	66.077	1.928					26	11	3	0	0	0	0.059546	2	26828	26828;26877		64.236	31.931	1	4315200		+	12126	356	6123	6148	14637;14638	14637					-0.06754277238746909
IYEEYDRH	8	Unmodified	_IYEEYDRH_					0	0	0		PTPN9|p.E308Dfs*6|1|0.11|ENSG00000169410|chr15:75505719-75505720|-/G|frameshift_variant	PTPN9|p.E308Dfs*6|1|0.11|ENSG00000169410|chr15:75505719-75505720|-/G|frameshift_variant	PTPN9|p.E308Dfs*6|1|0.11|ENSG00000169410|chr15:75505719-75505720|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5051452517509	3	375.505089	1123.49344	-0.24977	-9.379E-05	0.56561	0.00021239	0.31584	0.0001186	375.50536287376195	6.6395	2.3826	7.3702	6.6567	9.0393	0.73074					294	176	3	0	0	0	0.88791	1	2488	2488		3.9444	1.2092	1	1880900			12127	8066	6124	6149	14639	14639					-0.06336912321489763
IYEFDFSSCI	10	Unmodified	_IYEFDFSSCI_					0	0	0			REV__tr|A0A7D6ZUN7|A0A7D6ZUN7_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12665PE=4SV=1	REV__tr|A0A7D6ZUN7|A0A7D6ZUN7_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12665PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5165893435478	3	408.514485	1222.52163	1.6493	0.00067376	3.0139	0.0012312	4.6632	0.001905	408.5156245554509	71.669	1.4752	73.011	72.541	74.016	1.3415					194	47	5	0	0	0	0.87699	1	30217	30217		1.9064	0.1641	1	5700200	+		12128	15724	6125	6150	14640	14640					-0.08073350456402295
IYEFDFSSCI	10	Unmodified	_IYEFDFSSCI_					0	0	0			REV__tr|A0A7D6ZUN7|A0A7D6ZUN7_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12665PE=4SV=1	REV__tr|A0A7D6ZUN7|A0A7D6ZUN7_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12665PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5168640017509	3	408.514485	1222.52163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.539	1	73.363	72.863	73.863	1.824								0	0	0	0.65836	1	30013	30013		3.5871	0.59182	1		+		12129	15724	6125	6150	14641	14641					-0.08073350456402295
IYEIIDNSQGF	11	Unmodified	_IYEIIDNSQGF_					0	0	0		nc|ENSG00000135069|Q9Y617-2|PSAT1;ENSG00000135069|ENST00000376588|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.8216430544853	2	649.816793	1297.61903	2.6449	0.0017187	0.89863	0.00058395	3.5435	0.0023026	649.8173724068533	59.209	0.21873	61.178	61.067	61.286	1.969					12	6	2	0	0	0	0.54522	1	24865	24865		22.736	14.581	1	1062100			12130	2646	6126	6151	14642	14642					-0.017872452559231533
IYEIIDNSQGF	11	Unmodified	_IYEIIDNSQGF_					0	0	0		nc|ENSG00000135069|Q9Y617-2|PSAT1;ENSG00000135069|ENST00000376588|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	nc|ENSG00000135069|Q9Y617-2|PSAT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	649.816793	1297.61903	2.1756	0.0014137	0.53933	0.00035047	2.7149	0.0017642	649.8172199453193	59.624	0.21922	61.043	60.926	61.146	1.4196	-0.067131	-0.00011472	NaN	22.736	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	837120			12131	2646	6126	6151							-0.017872452559231533
IYELMQTEF	9	Unmodified	_IYELMQTEF_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2777587771416	2	587.278457	1172.54236	1.8189	0.0010682	-1.0655	-0.00062573	0.75342	0.00044247	587.2781613677483	66.818	0.41051	68.207	67.996	68.407	1.3888					29	12	4	0	0	0	0.17276	1	28013	28013		36.127	20.28	1	1330700			12132	4161	6127	6152	14643	14643					-0.03700760076753795
IYELMQTEF	9	Unmodified	_IYELMQTEF_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.2797729372978	2	587.278457	1172.54236	1.6294	0.00095692	-1.3829	-0.00081215	0.24651	0.00014477	587.2779218952534	66.38	0.3796	68.269	68.088	68.467	1.8889					25	11	3	0	0	0	0.20671	1	27849	27849		32.305	16.458	1	1443300			12133	4161	6127	6152	14644	14644					-0.03700760076753795
IYEPNFIFF	9	Unmodified	_IYEPNFIFF_					0	0	0		SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant;ENSG00000087365|ENST00000322535|SF3B2	SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant	SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.3040038943291	2	595.30005	1188.58555	3.9372	0.0023438	-1.8068	-0.0010756	2.1304	0.0012682	595.2988010673295	96.259	0.33862	96.68	96.541	96.88	0.4212					26	10	4	0	0	0	0.066815	2	40483	40483;40540		61.357	25.23	1	13830000			12134	1090	6128	6153	14645;14646	14645					-0.0012020223716717737
IYEPNFIFF	9	Unmodified	_IYEPNFIFF_					0	0	0		SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant;ENSG00000087365|ENST00000322535|SF3B2	SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant	SF3B2|p.V462Gfs*19|1|0.11|ENSG00000087365|chr11:66059579-66059579|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.3025390505791	2	595.30005	1188.58555	3.3193	0.001976	0.58349	0.00034735	3.9028	0.0023233	595.3001638547543	96.082	0.30283	96.484	96.336	96.638	0.40208					27	9	4	0	0	0	0.066815	2	40398	40398;40443		61.357	25.313	1	6880000			12135	1090	6128	6153	14647;14648	14647					-0.0012020223716717737
IYFDGDFGHF	10	Unmodified	_IYFDGDFGHF_					0	0	0		nc|ENSG00000168827|Q96RP9-2|GFM1	nc|ENSG00000168827|Q96RP9-2|GFM1	nc|ENSG00000168827|Q96RP9-2|GFM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.2674438357353	2	609.266739	1216.51892	2.2223	0.001354	-2.4175	-0.0014729	-0.19522	-0.00011894	609.2661167599118	63.552	0.46017	64.966	64.753	65.213	1.4134					31	14	4	0	0	0	0.047918	2	26644	26644;26698		85.357	58.473	1	4856700			12136	7922	6129	6154	14649;14650	14649					-0.08067437799059007
IYFDGDFGHF	10	Unmodified	_IYFDGDFGHF_					0	0	0		nc|ENSG00000168827|Q96RP9-2|GFM1	nc|ENSG00000168827|Q96RP9-2|GFM1	nc|ENSG00000168827|Q96RP9-2|GFM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.2681762576103	2	609.266739	1216.51892	2.2341	0.0013612	-2.0291	-0.0012363	0.20501	0.00012491	609.2660431611022	63.003	0.36964	64.947	64.752	65.121	1.9444					29	11	4	0	0	0	0.062633	2	26420	26420;26477		97.075	66.438	1	4302200			12137	7922	6129	6154	14651;14652	14651					-0.08067437799059007
IYFEYSHAF	9	Unmodified	_IYFEYSHAF_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7717773318291	2	588.771657	1175.52876	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.904	1	53.3	52.8	53.8	1.3966								0	0	0	0.04443	1	21732	21732		50.855	33.913	1				12138	1817	6130	6155	14653	14653					-0.05198249793670584
IYFEYSHAF	9	Unmodified	_IYFEYSHAF_					0	0	0		ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	ENSG00000113318|ENST00000265081|MSH3	MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7717162966728	2	588.771657	1175.52876	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.332	1	53.308	52.808	53.808	1.9753								0	0	0	0.04443	1	21513	21513		50.855	33.913	1				12139	1817	6130	6155	14654	14654					-0.05198249793670584
IYFFIQTV	8	Unmodified	_IYFFIQTV_					0	0	0			REV__ENSG00000198601|ENST00000641836|OR2M2	REV__ENSG00000198601|ENST00000641836|OR2M2	MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7852050662041	2	515.784036	1029.55352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.636	1	92.573	92.073	93.073	0.93623								0	0	0	1.0178	1	38593	38593		15.768	1.1865	1		+		12140	11718	6131	6156	14655	14655					0.039924300797110845
IYFGYGIWNS	10	Unmodified	_IYFGYGIWNS_					0	0	0		SLC7A14|p.T743Pfs*4|1|0.32|ENSG00000013293|chr3:170467144-170467145|-/CCGG|frameshift_variant;ENSG00000013293|ENST00000231706|SLC7A14	SLC7A14|p.T743Pfs*4|1|0.32|ENSG00000013293|chr3:170467144-170467145|-/CCGG|frameshift_variant	SLC7A14|p.T743Pfs*4|1|0.32|ENSG00000013293|chr3:170467144-170467145|-/CCGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.2938720583916	2	610.292756	1218.57096	5.6192	0.0034294	-1.639	-0.0010003	3.9802	0.0024291	610.2907459103011	89.004	0.35438	90.06	89.853	90.207	1.0562					20	10	3	0	0	0	0.40874	2	37489	37489;37538		32.786	1.1575	1	2160300			12141	582	6132	6157	14656;14657	14656					-0.029582743852643034
IYFPKKEAVTF	11	Unmodified	_IYFPKKEAVTF_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2525207400322	3	448.251701	1341.73327	2.5271	0.0011328	-0.35602	-0.00015959	2.1711	0.00097319	448.2514471945384	39.294	0.40524	40.59	40.382	40.787	1.2961					40	12	5	0	0	0	0.30922	2	16499	16450;16499		31.462	15.923	1	11050000			12142	2756	6133	6158	14658;14659	14659					0.07607689296833087
IYFPKKEAVTF	11	Unmodified	_IYFPKKEAVTF_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	671.8726684451103	2	671.873914	1341.73327	2.081	0.0013982	0.47452	0.00031882	2.5555	0.001717	672.376069365183	39.274	0.25746	40.57	40.443	40.701	1.2961					19	7	3	0	0	0	0.35569	1	16478	16478		28.495	12.647	1	812150			12143	2756	6133	6158	14660	14660					0.07607689296833087
IYFPKKEAVTF	11	Unmodified	_IYFPKKEAVTF_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2525207400322	3	448.251701	1341.73327	1.4563	0.00065278	-0.072928	-3.269E-05	1.3834	0.00062009	448.25161208596194	38.774	1.169	40.61	39.775	40.944	1.8366					40	12	4	0	0	0	0.32331	3	16276	16227;16276;16316		30.354	15.516	1	10011000			12144	2756	6133	6158	14661;14662;14663	14662					0.07607689296833087
IYFPKKEAVTF	11	Unmodified	_IYFPKKEAVTF_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	671.8752319216728	2	671.873914	1341.73327	0.99183	0.00066639	0.87021	0.00058467	1.862	0.0012511	671.8737246513049	38.802	0.29012	40.639	40.461	40.751	1.8366					12	8	2	0	0	0	0.35569	1	16265	16265		34.932	21.026	1	910250			12145	2756	6133	6158	14664	14664					0.07607689296833087
IYFQAPVKI	9	Unmodified	_IYFQAPVKI_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8211547732353	2	539.81841	1077.62227	1.697	0.0009161	2.3439	0.0012653	4.0409	0.0021814	539.820841474289	56.723	0.24373	58.137	58.001	58.245	1.4145					16	7	3	0	0	0	0.10993	1	23767	23767		46.021	17.534	1	2582200			12146	821	6134	6159	14665	14665					0.0865609437942112
IYFQAPVKI	9	Unmodified	_IYFQAPVKI_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54552318-54579000:-|nuORF	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8193237185478	2	539.81841	1077.62227	1.2874	0.00069497	2.3034	0.0012434	3.5908	0.0019384	539.8204960516998	56.126	0.24567	58.094	57.964	58.21	1.9684					17	7	3	0	0	0	0.066815	1	23526	23526		61.357	25.313	1	1706000			12147	821	6134	6159	14666	14666					0.0865609437942112
IYGKYFQEL	9	Unmodified	_IYGKYFQEL_					0	0	0		ENST00000494976.1_1_2:162016988-162019075:+|nuORF	ENST00000494976.1_1_2:162016988-162019075:+|nuORF	ENST00000494976.1_1_2:162016988-162019075:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8101074099541	2	580.802957	1159.59136	1.5295	0.00088835	4.461	0.002591	5.9905	0.0034793	580.80624838782	45.378	0.41238	47.338	47.176	47.589	1.9596					43	12	5	0	0	0	0.12251	1	18999	18999		41.84	1.3911	1	2761500			12148	6940	6135	6160	14667	14667					0.017948962745094832
IYGLLKNPF	9	Unmodified	_IYGLLKNPF_					0	0	0		ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	ENST00000463270.1_1_10:27418274-27425210:-|nuORF	ENST00000463270.1_1_10:27418274-27425210:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.8117553591728	2	532.810585	1063.60662	3.0497	0.0016249	0.10775	5.7413E-05	3.1575	0.0016823	532.8105671060796	60.417	0.55439	61.837	61.566	62.121	1.4196					53	17	4	0	0	0	0.00029988	2	25326	25326;25377		137.59	57.209	1	14545000			12149	2735	6136	6161	14668;14669	14668					0.07735807862354704
IYGLLKNPF	9	Unmodified	_IYGLLKNPF_					0	0	0		ENST00000463270.1_1_10:27418274-27425210:-|nuORF;nc|ENSG00000136758|Q96TA2-3|YME1L1;ENSG00000136758|ENST00000376016|YME1L1;nc|ENSG00000136758|Q96TA2|YME1L1	ENST00000463270.1_1_10:27418274-27425210:-|nuORF	ENST00000463270.1_1_10:27418274-27425210:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.8126098513603	2	532.810585	1063.60662	3.2825	0.001749	0.33729	0.00017971	3.6198	0.0019287	532.8107403345474	59.934	0.46818	61.903	61.64	62.108	1.969					44	14	4	0	0	0	0.0001133	3	25104	25104;25154;25193		146.01	75.292	1	15079000			12150	2735	6136	6161	14670;14671;14672	14670					0.07735807862354704
IYGPLLEKR	9	Unmodified	_IYGPLLEKR_					0	0	0		nc|ENSG00000293034|A6NFF2|NAP1L6P	nc|ENSG00000293034|A6NFF2|NAP1L6P	nc|ENSG00000293034|A6NFF2|NAP1L6P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.8254272341728	2	544.826766	1087.63898	1.9045	0.0010376	-3.9962	-0.0021772	-2.0917	-0.0011396	544.8248446603118	82.57	0.3381	82.57	82.368	82.706	0					21	10	3	0	0	0	0.82604	1	34380	34380		2.3027	0.4585	1	1934000			12151	8025	6137	6162	14673	14673					0.09866595265361866
IYGYSILILI	10	Unmodified	_IYGYSILILI_					0	0	0			REV__ENSG00000204704|ENST00000377175|OR2W1	REV__ENSG00000204704|ENST00000377175|OR2W1	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3588744997978	2	584.354825	1166.6951	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.766	1	77.083	76.583	77.583	0.31653								0	0	0	0.66155	1	32105	32105		1.8442	0.6509	1		+		12152	11800	6138	6163	14674	14674					0.11841803382208127
IYGYVAEQF	9	Unmodified	_IYGYVAEQF_					0	0	0		ENST00000448693.2_1_3:52740223-52740934:+|nuORF;ENSG00000114902|ENST00000619898|SPCS1;nc|ENSG00000114902|Q9Y6A9|SPCS1	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1089.525805652142	1	1089.52514	1088.51786	0.39063	0.0004256	-0.97503	-0.0010623	-0.5844	-0.00063672	1089.5251403291434	53.153	0.32	54.554	54.313	54.633	1.4005					15	9	2	0	0	0	0.11911	1	22239	22239		42.968	14.481	1	2001700			12153	1887	6139	6164	14675	14675					-0.022856521679386788
IYGYVAEQF	9	Unmodified	_IYGYVAEQF_					0	0	0		ENST00000448693.2_1_3:52740223-52740934:+|nuORF;ENSG00000114902|ENST00000619898|SPCS1;nc|ENSG00000114902|Q9Y6A9|SPCS1	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1089.526049792767	1	1089.52514	1088.51786	1.2926	0.0014083	-1.0157	-0.0011067	0.27681	0.00030159	1089.523444756861	52.588	0.32077	54.56	54.385	54.705	1.9722					16	9	2	0	0	0	0.087207	2	22065	22012;22065		53.576	25.089	1	2499000			12154	1887	6139	6164	14676;14677	14677					-0.022856521679386788
IYGYVAEQF	9	Unmodified	_IYGYVAEQF_					0	0	0		ENST00000448693.2_1_3:52740223-52740934:+|nuORF;ENSG00000114902|ENST00000619898|SPCS1;nc|ENSG00000114902|Q9Y6A9|SPCS1	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	ENST00000448693.2_1_3:52740223-52740934:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2668945193291	2	545.266207	1088.51786	1.1013	0.00060048	3.1319	0.0017077	4.2331	0.0023082	545.2661938127727	52.622	0.35135	54.594	54.385	54.736	1.9722					15	10	2	0	0	0	0.11911	1	22043	22043		42.968	24.822	1	5245400			12155	1887	6139	6164	14678	14678					-0.022856521679386788
IYHGLATLL	9	Unmodified	_IYHGLATLL_					0	0	0		nc|ENSG00000130396|P55196-2|AFDN;nc|ENSG00000130396|P55196-6|AFDN;nc|ENSG00000130396|P55196-3|AFDN;nc|ENSG00000130396|P55196-1|AFDN;nc|ENSG00000130396|P55196|AFDN;ENSG00000130396|ENST00000683244|AFDN;nc|ENSG00000130396|P55196-5|AFDN	nc|ENSG00000130396|P55196-2|AFDN	nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7957641482353	2	500.794935	999.575317	1.6731	0.00083788	-3.1693	-0.0015872	-1.4962	-0.00074929	501.2932071065893	54.777	0.42984	56.181	55.899	56.328	1.4048					23	13	2	0	0	0	0.070759	1	22942	22942		59.795	12.874	1	3692600			12156	2433	6140	6165	14679	14679					0.07551234828292763
IYIAGHPAF	9	Unmodified	_IYIAGHPAF_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;nc|ENSG00000104824|P14866-2|HNRNPL;ENST00000568980.1_1_15:34781792-34782686:-|nuORF;HNRNPL-SRRT|1|fusion;HNRNPL-SRRT|2|fusion	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.3084594607353	2	494.766178	987.517802	1.3656	0.00067563	0.42753	0.00021153	1.7931	0.00088716	494.7664481258312	38.865	0.25825	40.702	40.59	40.848	1.8366					18	7	3	0	0	0	0.068416	1	16310	16310		36.466	12.256	1	1132900			12157	1478	6141	6166	14680	14680					0.023543926227148404
IYICSYLLY	9	Unmodified	_IYICSYLLY_					0	0	0			REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1150.592578113079	1	1150.5853	1149.57802	3.7332	0.0042954	-2.5545	-0.0029392	1.1787	0.0013562	1150.5823395324046	94.825	0.41837	95.566	95.325	95.743	0.74124					33	13	3	0	0	0	0.069258	1	39822	39822		60.39	2.9182	1	35407000	+		12158	12773	6142	6167	14681	14681					0.00921322170916028
IYICSYLLY	9	Unmodified	_IYICSYLLY_					0	0	0			REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7952148318291	2	575.796286	1149.57802	3.2717	0.0018838	-2.7195	-0.0015659	0.55219	0.00031795	575.7946857059802	94.387	0.56195	95.575	95.302	95.864	1.1887					61	17	5	0	0	0	0.087207	1	39761	39761		53.576	6.6547	1	42659000	+		12159	12773	6142	6167	14682	14682					0.00921322170916028
IYICSYLLY	9	Unmodified	_IYICSYLLY_					0	0	0			REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	REV__ENST00000381298.6_1_5:55235198-55235360:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1150.583666980267	1	1150.5853	1149.57802	2.9698	0.003417	-2.7507	-0.003165	0.21905	0.00025203	1150.5818493638183	94.387	0.50162	95.575	95.302	95.803	1.1887					49	15	4	0	0	0	0.076627	1	39788	39788		57.471	6.6163	1	38036000	+		12160	12773	6142	6167	14683	14683					0.00921322170916028
IYIDRFEDL	9	Unmodified	_IYIDRFEDL_					0	0	0		ENSG00000152219|ENST00000282032|ARL14EP	ENSG00000152219|ENST00000282032|ARL14EP	ENSG00000152219|ENST00000282032|ARL14EP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3035766482353	2	592.303321	1182.59209	1.6759	0.00099267	-1.295	-0.00076701	0.38097	0.00022565	592.3024169804236	54.716	0.34143	56.121	55.899	56.24	1.4048					18	10	2	0	0	0	0.0070725	1	22896	22896		114.2	52.844	1	3822900			12161	3315	6143	6168	14684	14684					0.008096909235973726
IYIDRFEDL	9	Unmodified	_IYIDRFEDL_					0	0	0		ENSG00000152219|ENST00000282032|ARL14EP	ENSG00000152219|ENST00000282032|ARL14EP	ENSG00000152219|ENST00000282032|ARL14EP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3040038943291	2	592.303321	1182.59209	1.9861	0.0011764	-0.50183	-0.00029724	1.4843	0.00087915	592.3029692085046	54.239	0.34621	56.207	56.032	56.379	1.9684					18	10	2	0	0	0	0.075994	1	22716	22716		57.722	7.789	1	3551000			12162	3315	6143	6168	14685	14685					0.008096909235973726
IYIDRGVVF	9	Unmodified	_IYIDRGVVF_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11;nc|ENSG00000100109|Q9UBB9-2|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.3060790896416	2	541.305667	1080.59678	0.060439	3.2716E-05	0.023771	1.2867E-05	0.08421	4.5583E-05	541.3055929749216	51.153	0.33766	53.128	53.03	53.367	1.9753					23	13	2	0	0	0	0.12216	2	21471	21432;21471		41.956	13.469	1	5138300			12163	1243	6144	6169	14686;14687	14687					0.059706198569983826
IYIDRGVVF	9	Unmodified	_IYIDRGVVF_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11;nc|ENSG00000100109|Q9UBB9-2|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	541.305667	1080.59678	0.96526	0.0005225	0.13001	7.0377E-05	1.0953	0.00059288	541.3057809381651	51.798	0.33386	53.195	53.012	53.346	1.3966	0.033357	5.6792E-05	NaN	41.956	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4386700			12164	1243	6144	6169							0.059706198569983826
IYIDRGVVF	9	Unmodified	_IYIDRGVVF_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11;nc|ENSG00000100109|Q9UBB9-2|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	541.305667	1080.59678	0.060439	3.2716E-05	0.023771	1.2867E-05	0.08421	4.5583E-05	541.3055929749216	51.153	0.33766	53.128	53.03	53.367	1.9753	-0.033357	-5.8228E-05	NaN	41.956	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5138300			12165	1243	6144	6169							0.059706198569983826
IYIKHPHLF	9	Unmodified	_IYIKHPHLF_					0	0	0		ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	389.2541381716728	3	389.89396	1166.66005	0.15247	5.9447E-05	1.6767	0.00065375	1.8292	0.0007132	389.8946571541846	30.372	1.5187	31.655	31.317	32.836	1.2825					109	48	3	0	0	0	0.098208	1	12704	12704		18.146	15.151	1	2886800			12166	1353	6145	6170	14688	14688					0.08338605364883733
IYIKHPHLF	9	Unmodified	_IYIKHPHLF_					0	0	0		ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	389.2538024783134	3	389.89396	1166.66005	0.61167	0.00023849	0.74707	0.00029128	1.3587	0.00052977	389.89440856616983	29.834	1.3306	31.642	31.365	32.696	1.8086					92	43	3	0	0	0	0.1082	1	12474	12474		13.042	8.1455	1	2835300			12167	1353	6145	6170	14689	14689					0.08338605364883733
IYIKQIKTF	9	Unmodified	_IYIKQIKTF_					0	0	0		ENSG00000103479|ENST00000262133|RBL2	ENSG00000103479|ENST00000262133|RBL2	ENSG00000103479|ENST00000262133|RBL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	385.2363769412041	3	385.237504	1152.69068	-0.20117	-7.7497E-05	-1.9805	-0.00076298	-2.1817	-0.00084047	385.23658941592083	33.349	0.26395	34.627	34.467	34.731	1.2782					34	21	2	0	0	0	0.025926	1	13992	13992		93.938	55.763	1	24441000			12168	1432	6146	6171	14690	14690					0.12044338959276502
IYIKQIKTF	9	Unmodified	_IYIKQIKTF_					0	0	0		ENSG00000103479|ENST00000262133|RBL2	ENSG00000103479|ENST00000262133|RBL2	ENSG00000103479|ENST00000262133|RBL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3520995974541	2	577.352617	1152.69068	0.8268	0.00047736	-0.57876	-0.00033415	0.24804	0.0001432	577.3522358926276	32.858	0.23966	34.683	34.499	34.738	1.8246					23	14	2	0	0	0	0.0014468	2	13731	13731;13779		140.63	76.875	1	5270500			12169	1432	6146	6171	14691;14692	14691					0.12044338959276502
IYILDPELL	9	Unmodified	_IYILDPELL_					0	0	0		ENST00000529698.1_1_11:46396583-46398763:+|nuORF;ENST00000528173.5_1_11:46391373-46400221:+|nuORF;ENST00000531879.5_1_11:46367016-46400221:+|nuORF;nc|ENSG00000149091|Q13574-6|DGKZ;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ	ENST00000529698.1_1_11:46396583-46398763:+|nuORF	ENST00000529698.1_1_11:46396583-46398763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8192626833916	2	544.815533	1087.61651	5.0975	0.0027772	1.7641	0.00096112	6.8616	0.0037383	544.816699424414	89.519	0.37592	90.539	90.3	90.676	1.0199					18	11	2	0	0	0	0.10722	1	37735	37735		46.921	4.8263	1	1600000			12170	3227	6147	6172	14693	14693					0.07620951077092286
IYILDPELL	9	Unmodified	_IYILDPELL_					0	0	0		ENST00000529698.1_1_11:46396583-46398763:+|nuORF;ENST00000528173.5_1_11:46391373-46400221:+|nuORF;ENST00000531879.5_1_11:46367016-46400221:+|nuORF;nc|ENSG00000149091|Q13574-6|DGKZ;ENSG00000149091|ENST00000456247|DGKZ;nc|ENSG00000149091|Q13574-4|DGKZ;nc|ENSG00000149091|Q13574-7|DGKZ;nc|ENSG00000149091|Q13574-5|DGKZ;nc|ENSG00000149091|Q13574-3|DGKZ;nc|ENSG00000149091|Q13574-1|DGKZ	ENST00000529698.1_1_11:46396583-46398763:+|nuORF	ENST00000529698.1_1_11:46396583-46398763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8188354372978	2	544.815533	1087.61651	4.6901	0.0025553	0.89914	0.00048987	5.5893	0.0030451	544.8160692005061	89.112	0.28603	90.517	90.328	90.614	1.4044					15	8	2	0	0	0	0.22519	1	37525	37525		30.225	3.3412	1	808530			12171	3227	6147	6172	14694	14694					0.07620951077092286
IYINGILVHA	10	Unmodified	_IYINGILVHA_					0	0	0			REV__ENSG00000176742|ENST00000641270|OR51V1	REV__ENSG00000176742|ENST00000641270|OR51V1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1013366580009	3	371.553603	1111.63898	0.094645	3.5166E-05	-3.0114	-0.0011189	-2.9168	-0.0010837	371.5523594937438	13.913	0.24996	14.013	13.904	14.154	0.09944					17	7	3	0	0	0	0.12559	1	5775	5775		0.15932	0	1	949900	+		12172	11192	6148	6173	14695	14695					0.08762595265397977
IYIPSYFDF	9	Unmodified	_IYIPSYFDF_					0	0	0		ENST00000457820.1_2_1:210016778-210017042:+|nuORF;ENSG00000117597|ENST00000491415|UTP25	ENST00000457820.1_2_1:210016778-210017042:+|nuORF	ENST00000457820.1_2_1:210016778-210017042:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.7883788943291	2	582.784233	1163.55391	3.4197	0.0019929	0.85183	0.00049643	4.2715	0.0024894	582.7844412193451	91.14	0.25529	92.506	92.342	92.597	1.366					17	7	3	0	0	0	0.3154	1	38369	38369		24.674	0	1	870100			12173	2017	6149	6174	14696	14696					-0.021321949910998228
IYIPSYFDF	9	Unmodified	_IYIPSYFDF_					0	0	0		ENST00000457820.1_2_1:210016778-210017042:+|nuORF;ENSG00000117597|ENST00000491415|UTP25	ENST00000457820.1_2_1:210016778-210017042:+|nuORF	ENST00000457820.1_2_1:210016778-210017042:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	582.784233	1163.55391	4.0851	0.0023807	-0.89983	-0.00052441	3.1853	0.0018563	582.7842263816245	91.547	0.34168	92.483	92.275	92.617	0.93623	-0.01146	-0.00060096	NaN	24.674	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1650400			12174	2017	6149	6174							-0.021321949910998228
IYIPTLAVL	9	Unmodified	_IYIPTLAVL_					0	0	0		nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;ENST00000606782.1_1_20:44521054-44521549:+|nuORF;ENST00000485627.1_1_20:44520959-44522735:+|nuORF	nc|ENSG00000064601|P10619-2|CTSA	nc|ENSG00000064601|P10619-2|CTSA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.8172790408134	2	501.815336	1001.61612	4.2524	0.0021339	-0.50596	-0.0002539	3.7464	0.00188	501.8152579983257	92.206	0.35363	93.142	92.955	93.309	0.93624					16	10	2	0	0	0	0.22519	1	38839	38839		30.225	1.738	1	714950			12175	774	6150	6175	14697	14697					0.11537576147907203
IYIPTLAVL	9	Unmodified	_IYIPTLAVL_					0	0	0		nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;ENST00000606782.1_1_20:44521054-44521549:+|nuORF;ENST00000485627.1_1_20:44520959-44522735:+|nuORF	nc|ENSG00000064601|P10619-2|CTSA	nc|ENSG00000064601|P10619-2|CTSA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	501.815336	1001.61612	2.9896	0.0015002	0.44393	0.00022277	3.4335	0.001723	501.8158738293017	91.778	0.28922	93.104	92.924	93.213	1.3269	-0.018684	0.00058924	NaN	30.225	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533000			12176	774	6150	6175							0.11537576147907203
IYIRWRNI	8	Unmodified	_IYIRWRNI_					0	0	0			REV__ENST00000550633.1_1_12:107466804-107486739:-|nuORF	REV__ENST00000550633.1_1_12:107466804-107486739:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3333007693291	2	567.33255	1132.65055	2.2377	0.0012695	-1.0395	-0.00058975	1.1982	0.00067978	567.3319407940987	41.625	0.57188	42.95	42.524	43.096	1.3254					29	17	3	0	0	0	0.87106	1	17486	17486		14.582	3.7578	1	1013800	+		12177	13827	6151	6176	14698	14698					0.08952837079368692
IYISTLKTEF	10	Unmodified	_IYISTLKTEF_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1;nc|ENSG00000100591|O95433-2|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8364745974541	2	607.836997	1213.65944	0.73916	0.00044929	-1.0384	-0.00063119	-0.29926	-0.0001819	607.8362561287653	53.286	0.28796	54.686	54.506	54.794	1.4005					24	11	3	0	0	0	0.054878	2	22309	22267;22309		76.825	29.223	1	5358200			12178	1290	6152	6177	14699;14700	14700					0.061157211345062024
IYISTLKTEF	10	Unmodified	_IYISTLKTEF_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1;nc|ENSG00000100591|O95433-2|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8371459841728	2	607.836997	1213.65944	1.01	0.00061393	-0.37579	-0.00022842	0.63423	0.00038551	607.8364273080593	52.693	0.31776	54.665	54.512	54.83	1.9722					27	12	3	0	0	0	0.064575	2	22101	22052;22101		114.2	33.526	1	5959000			12179	1290	6152	6177	14701;14702	14702					0.061157211345062024
IYITGSSII	9	Unmodified	_IYITGSSII_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B;ENST00000532072.1_1_1:44441705-44442052:+|nuORF;ENST00000472277.5_1_1:44440756-44442727:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	966.5543090701103	1	966.550625	965.543348	2.7506	0.0026586	0.018826	1.8196E-05	2.7695	0.0026768	966.5513623161874	60.878	0.25587	62.298	62.121	62.377	1.4196					13	7	2	0	0	0	0.069258	1	25516	25516		60.39	2.9182	1	1099700			12180	2006	6153	6178	14703	14703					0.059198223544854045
IYITGSSII	9	Unmodified	_IYITGSSII_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF;nc|ENSG00000117410|Q99437-2|ATP6V0B;ENST00000532072.1_1_1:44441705-44442052:+|nuORF;ENST00000472277.5_1_1:44440756-44442727:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	966.5535156130791	1	966.550625	965.543348	3.2055	0.0030983	-0.41093	-0.00039718	2.7946	0.0027011	966.5500986540928	60.355	0.28332	62.321	62.136	62.42	1.9653					14	8	2	0	0	0	0.069258	1	25329	25329		60.39	6.814	1	946480			12181	2006	6153	6178	14704	14704					0.059198223544854045
IYIVGGYNW	9	Unmodified	_IYIVGGYNW_					0	0	0		ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1084.548266589642	1	1084.54621	1083.53893	2.7145	0.002944	1.2043	0.0013061	3.9188	0.0042501	1084.546084186649	70.122	0.28008	71.476	71.272	71.552	1.3536					13	8	2	0	0	0	0.44535	1	29417	29417		18.135	7.3111	1	811700			12182	3971	6154	6179	14705	14705					0.0005035793155911961
IYIVGGYNW	9	Unmodified	_IYIVGGYNW_					0	0	0		ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7748901247978	2	542.776742	1083.53893	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.11	1	71.464	70.964	71.964	1.3536								0	0	0	0.29162	1	29426	29426		19.439	4.8573	1				12183	3971	6154	6179	14706	14706					0.0005035793155911961
IYIVGGYNW	9	Unmodified	_IYIVGGYNW_					0	0	0		ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	ENSG00000167487|ENST00000300976|KLHL26	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1084.54621	1083.53893	2.7614	0.0029949	-3.9119	-0.0042426	-1.1505	-0.0012477	1084.538799649348	69.621	0.1897	71.474	71.356	71.546	1.853	-0.0010101	-0.003278	NaN	18.135	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660970			12184	3971	6154	6179							0.0005035793155911961
IYIWDLNNF	9	Unmodified	_IYIWDLNNF_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3028442263603	2	599.300581	1196.58661	5.7497	0.0034458	-0.54937	-0.00032924	5.2003	0.0031166	599.3001999899166	89.007	0.54843	90.063	89.788	90.337	1.0562					49	16	4	0	0	0	0.033794	4	37492	37449;37492;37530;37573		81.613	43.639	1	18836000			12185	2846	6155	6180	14707;14708;14709;14710	14708					-0.003819878682406852
IYIWDLNNF	9	Unmodified	_IYIWDLNNF_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3035156130791	2	599.300581	1196.58661	4.7338	0.002837	0.88919	0.00053289	5.623	0.0033699	599.3011661813719	88.581	0.4502	90.028	89.825	90.275	1.4467					39	13	4	0	0	0	0.028763	3	37360	37284;37321;37360		89.427	43.406	1	14770000			12186	2846	6155	6180	14711;14712;14713	14713					-0.003819878682406852
IYIWDLNNF	9	Unmodified	_IYIWDLNNF_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1197.601855456829	1	1197.59389	1196.58661	4.0092	0.0048014	0.52657	0.00063062	4.5358	0.0054321	1197.5956435050637	88.651	0.29019	90.098	89.889	90.179	1.4467					11	8	2	0	0	0	0.1735	1	37337	37337		36.044	9.1605	1	1213300			12187	2846	6155	6180	14714	14714					-0.003819878682406852
IYIWDLNNF	9	Unmodified	_IYIWDLNNF_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1197.59389	1196.58661	5.3176	0.0063683	-1.7107	-0.0020487	3.6069	0.0043196	1197.5916566305107	88.986	0.25646	90.042	89.886	90.142	1.0562	-0.027939	-0.0013656	NaN	36.044	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1707600			12188	2846	6155	6180							-0.003819878682406852
IYKFDNIIST	10	Unmodified	_IYKFDNIIST_					0	0	0			REV__tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	REV__tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	404.5544921755791	3	405.22029	1212.63904	2.7991	0.0011342	3.0888	0.0012516	5.8878	0.0023859	405.22127821762126	64.456	0.33759	65.863	65.71	66.047	1.4071					18	10	2	0	0	0	0.12541	1	27055	27055		5.4027	1.2132	1	922550	+		12189	15430	6156	6181	14715	14715					0.04122550474698983
IYKFITERF	9	Unmodified	_IYKFITERF_					0	0	0		ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.2294494509697	3	406.229008	1215.66519	1.6031	0.00065123	0.84266	0.00034231	2.4458	0.00099354	406.22916709833225	42.13	0.46944	43.47	43.23	43.7	1.3399					44	14	4	0	0	0	0.15456	2	17652	17652;17703		29.437	20.685	1	5565800			12190	4494	6157	6182	14716;14717	14716					0.06598864436841723
IYKFITERF	9	Unmodified	_IYKFITERF_					0	0	0		ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8425170779228	2	608.839874	1215.66519	1.8789	0.001144	0.99666	0.00060681	2.8756	0.0017508	608.8402461844518	42.12	0.34702	43.46	43.32	43.667	1.3399					19	10	2	0	0	0	0.42097	1	17670	17670		19.362	4.5237	1	1206300			12191	4494	6157	6182	14718	14718					0.06598864436841723
IYKFITERF	9	Unmodified	_IYKFITERF_					0	0	0		ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	ENSG00000178919|ENST00000375123|FOXE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2298156619072	3	406.229008	1215.66519	1.7264	0.0007013	0.46953	0.00019074	2.1959	0.00089203	406.2290806120319	41.606	0.40963	43.499	43.325	43.734	1.8927					38	12	4	0	0	0	0.1109	2	17430	17430;17480		35.612	17.21	1	7049200			12192	4494	6157	6182	14719;14720	14719					0.06598864436841723
IYKFKRRV	8	Unmodified	_IYKFKRRV_					0	0	0		ENSG00000108018|ENST00000263054|SORCS1	ENSG00000108018|ENST00000263054|SORCS1	ENSG00000108018|ENST00000263054|SORCS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3533813357353	2	555.350743	1108.68693	5.3734	0.0029841	1.3526	0.00075118	6.7261	0.0037353	555.3518712654735	89.282	0.29054	90.302	90.138	90.429	1.0199					13	8	2	0	0	0	0.87803	1	37631	37631		10.183	0.10947	1	344930			12193	1618	6158	6183	14721	14721					0.13693713976090294
IYKFKRRV	8	Unmodified	_IYKFKRRV_					0	0	0		ENSG00000108018|ENST00000263054|SORCS1	ENSG00000108018|ENST00000263054|SORCS1	ENSG00000108018|ENST00000263054|SORCS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	555.350743	1108.68693	4.6144	0.0025626	1.8651	0.0010358	6.4795	0.0035984	555.351681149163	88.759	0.32086	90.205	90.113	90.434	1.4467	-0.048403	0.00039292	NaN	10.183	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337010			12194	1618	6158	6183							0.13693713976090294
IYKIDFVRF	9	Unmodified	_IYKIDFVRF_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	400.8976928591728	3	400.89737	1199.67028	0.32119	0.00012876	0.89059	0.00035703	1.2118	0.0004858	400.8976234790086	56.431	0.50865	57.846	57.584	58.093	1.4145					49	16	4	0	0	0	0.04812	2	23658	23620;23658		55.235	26.74	1	16506000			12195	1656	6159	6184	14722;14723	14723					0.07843168299450554
IYKIDFVRF	9	Unmodified	_IYKIDFVRF_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8425170779228	2	600.842416	1199.67028	0.7921	0.00047593	1.4858	0.00089274	2.2779	0.0013687	600.8434423478669	56.447	0.28022	57.862	57.69	57.971	1.4145					14	8	2	0	0	0	0.099302	1	23639	23639		49.554	18.918	1	1485300			12196	1656	6159	6184	14724	14724					0.07843168299450554
IYKIDFVRF	9	Unmodified	_IYKIDFVRF_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	400.8974487185478	3	400.89737	1199.67028	0.76109	0.00030512	-0.22899	-9.1802E-05	0.53209	0.00021332	400.89724005444396	55.853	0.43871	57.821	57.618	58.057	1.9684					36	14	3	0	0	0	0.070055	1	23414	23414		47.732	29.011	1	19386000			12197	1656	6159	6184	14725	14725					0.07843168299450554
IYKIDFVRF	9	Unmodified	_IYKIDFVRF_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	nc|ENSG00000109103|Q13432-2|UNC119	MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8430053591728	2	600.842416	1199.67028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.874	1	57.842	57.342	58.342	1.9684								0	0	0	0.041875	1	23431	23431		47.594	24.858	1				12198	1656	6159	6184	14726	14726					0.07843168299450554
IYKKAPSP	8	Unmodified	_IYKKAPSP_					0	0	0		ENST00000569152.1_1_15:75942404-75949317:+|nuORF	ENST00000569152.1_1_15:75942404-75949317:+|nuORF	ENST00000569152.1_1_15:75942404-75949317:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	903.2116577029228	1	903.52983	902.522553	3.0855	0.0027878	-0.31751	-0.00028688	2.768	0.0025009	903.5294998110952	94.428	0.5403	95.617	95.11	95.651	1.1887					20	16	2	0	0	0	2.3239	1	39732	39732		7.2892	0	1	4906400			12199	7378	6160	6185	14727	14727					0.06739276765472368
IYKPVTDFF	9	Unmodified	_IYKPVTDFF_					0	0	0		ENST00000472420.5_1_2:44123526-44126707:-|nuORF;ENST00000463456.5_1_2:44115741-44128754:-|nuORF;ENSG00000138095|ENST00000260665|LRPPRC	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3011352419853	2	565.30005	1128.58555	1.5043	0.00085039	0.19247	0.0001088	1.6968	0.00095919	565.3000019941567	56.658	0.36782	58.073	57.877	58.245	1.4145					27	11	3	0	0	0	0.031145	2	23778	23728;23778		85.642	33.373	1	6464100			12200	2815	6161	6186	14728;14729	14729					0.026397977628448643
IYKPVTDFF	9	Unmodified	_IYKPVTDFF_					0	0	0		ENST00000472420.5_1_2:44123526-44126707:-|nuORF;ENST00000463456.5_1_2:44115741-44128754:-|nuORF;ENSG00000138095|ENST00000260665|LRPPRC	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3008300662041	2	565.30005	1128.58555	1.1873	0.00067118	0.42034	0.00023762	1.6076	0.0009088	565.3002628072544	56.107	0.40228	58.076	57.871	58.273	1.9684					28	12	3	0	0	0	0.040497	3	23536	23488;23536;23592		75.761	29.74	1	5143900			12201	2815	6161	6186	14730;14731;14732	14731					0.026397977628448643
IYKPVTDFFL	10	Unmodified	_IYKPVTDFFL_					0	0	0		ENST00000472420.5_1_2:44123526-44126707:-|nuORF;ENST00000463456.5_1_2:44115741-44128754:-|nuORF;ENSG00000138095|ENST00000260665|LRPPRC	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8439208865166	2	621.842082	1241.66961	2.5428	0.0015812	-0.19512	-0.00012134	2.3477	0.0014599	621.8420564552911	70.122	0.37283	71.476	71.243	71.616	1.3536					27	11	3	0	0	0	0.13797	2	29404	29404;29455		57.249	11.228	1	3670300			12202	2815	6162	6187	14733;14734	14733					0.05844328859757297
IYKPVTDFFL	10	Unmodified	_IYKPVTDFFL_					0	0	0		ENST00000472420.5_1_2:44123526-44126707:-|nuORF;ENST00000463456.5_1_2:44115741-44128754:-|nuORF;ENSG00000138095|ENST00000260665|LRPPRC	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	ENST00000472420.5_1_2:44123526-44126707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8432494997978	2	621.842082	1241.66961	1.926	0.0011977	-0.71863	-0.00044687	1.2074	0.00075082	621.8422225228737	69.543	0.34712	71.396	71.199	71.546	1.853					25	10	3	0	0	0	0.1784	2	29166	29166;29217		51.63	18.844	1	2745500			12203	2815	6162	6187	14735;14736	14735					0.05844328859757297
IYKRMVSNL	9	Unmodified	_IYKRMVSNL_					0	0	0			REV__tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	REV__tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3206054568291	2	562.318251	1122.62195	1.7379	0.00097728	0.63871	0.00035916	2.3766	0.0013364	562.3179496754694	54.133	0.60055	55.538	55.459	56.06	1.4048					30	18	2	0	0	0	0.46905	1	22652	22652		16.942	4.4107	1	1382900	+		12204	15330	6163	6188	14737	14737					0.06554351387921997
IYKRMVSNL	9	Unmodified	_IYKRMVSNL_					0	0	0			REV__tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	REV__tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.8207885622978	2	562.318251	1122.62195	1.7379	0.00097728	0.63871	0.00035916	2.3766	0.0013364	562.3179496754694	54.133	0.60055	55.538	55.459	56.06	1.4048					30	18	2	0	0	0	0.095205	1	22708	22708		25.399	3.6527	1	1382900	+		12205	15330	6163	6188	14738	14738					0.06554351387921997
IYKWANILI	9	Unmodified	_IYKWANILI_					0	0	0		ENSG00000169684|ENST00000299565|CHRNA5	ENSG00000169684|ENST00000299565|CHRNA5	ENSG00000169684|ENST00000299565|CHRNA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3397704958916	2	567.33951	1132.66447	2.9375	0.0016666	-1.8861	-0.0010701	1.0514	0.00059649	567.3380161006522	70.183	0.43966	71.537	71.272	71.712	1.3536					28	13	3	0	0	0	0.1735	1	29474	29474		36.044	1.9418	1	2933100			12206	4106	6164	6189	14739	14739					0.10344069787788612
IYKWWKRKLIV	11	Unmodified	_IYKWWKRKLIV_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MSMS	GG20161007_CRH_Patient100_W632_01	3	766.9807617068291	2	766.976839	1531.93913	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.943	1	98.17	97.67	98.67	0.22776								0	0	0	0.63775	1	41220	41220		0.30703	0	1		+		12207	9302	6165	6190	14740	14740					0.19443307266760712
IYKYGFEQL	9	Unmodified	_IYKYGFEQL_					0	0	0			REV__tr|A0A553STT0|A0A553STT0_NIACIATP-dependentsacrificialsulfurtransferaseLarEOS=NialliacirculansOX=1397GN=larEPE=4SV=1	REV__tr|A0A553STT0|A0A553STT0_NIACIATP-dependentsacrificialsulfurtransferaseLarEOS=NialliacirculansOX=1397GN=larEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8074218630791	2	580.802957	1159.59136	1.678	0.00097459	3.1733	0.0018431	4.8513	0.0028177	580.8055289493705	45.943	0.4997	47.318	46.96	47.46	1.3751					32	15	3	0	0	0	0.099302	2	19252	19201;19252		49.554	0	1	3208900	+		12208	15259	6166	6191	14741;14742	14742					0.017948962745094832
IYKYGFEQL	9	Unmodified	_IYKYGFEQL_					0	0	0			REV__tr|A0A553STT0|A0A553STT0_NIACIATP-dependentsacrificialsulfurtransferaseLarEOS=NialliacirculansOX=1397GN=larEPE=4SV=1	REV__tr|A0A553STT0|A0A553STT0_NIACIATP-dependentsacrificialsulfurtransferaseLarEOS=NialliacirculansOX=1397GN=larEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8059570193291	2	580.802957	1159.59136	1.5295	0.00088835	4.461	0.002591	5.9905	0.0034793	580.80624838782	45.378	0.41238	47.338	47.176	47.589	1.9596					43	12	5	0	0	0	0.13873	1	19049	19049		39.957	0	1	2761500	+		12209	15259	6166	6191	14743	14743					0.017948962745094832
IYLDELQVI	9	Unmodified	_IYLDELQVI_					0	0	0		ENST00000473034.5_1_2:219533245-219536693:-|nuORF;ENST00000463188.5_1_2:219529923-219536693:-|nuORF;RNF25-NHEJ1|1|fusion;ENSG00000163481|ENST00000295704|RNF25	ENST00000473034.5_1_2:219533245-219536693:-|nuORF	ENST00000473034.5_1_2:219533245-219536693:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3111450076103	2	553.310615	1104.60668	2.5963	0.0014366	-0.72141	-0.00039916	1.8749	0.0010374	553.3104681543489	78.684	0.34383	79.951	79.787	80.13	1.2668					24	10	3	0	0	0	0.1735	1	33018	33018		36.044	7.5574	1	1617200			12210	3686	6167	6192	14744	14744					0.05855763071713227
IYLDELQVI	9	Unmodified	_IYLDELQVI_					0	0	0		ENST00000473034.5_1_2:219533245-219536693:-|nuORF;ENST00000463188.5_1_2:219529923-219536693:-|nuORF;RNF25-NHEJ1|1|fusion;ENSG00000163481|ENST00000295704|RNF25	ENST00000473034.5_1_2:219533245-219536693:-|nuORF	ENST00000473034.5_1_2:219533245-219536693:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3131591677666	2	553.310615	1104.60668	1.9109	0.0010573	0.56958	0.00031515	2.4804	0.0013724	553.3109632072612	78.257	0.37261	79.992	79.761	80.133	1.735					24	11	3	0	0	0	0.09539	1	32820	32820		50.855	12.704	1	2198500			12211	3686	6167	6192	14745	14745					0.05855763071713227
IYLDGIITI	9	Unmodified	_IYLDGIITI_					0	0	0		ENST00000431099.3_1_9:160122-173274:-|nuORF;ENST00000495302.5_1_9:151417-166034:-|nuORF;ENST00000461037.2_9:69234942-69249581:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;ENST00000377445.5_9:69238165-69262487:-|nuORF;nc|ENSG00000215126|Q5RIA9-3|ZNG1E;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;ENSG00000215126|ENST00000377391|ZNG1F;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000136682|ENST00000259199|ZNG1B	ENST00000431099.3_1_9:160122-173274:-|nuORF	ENST00000431099.3_1_9:160122-173274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1020.594409167767	1	1020.59757	1019.5903	2.5587	0.0026114	-1.2312	-0.0012565	1.3275	0.0013549	1020.5954494596568	86.124	0.31306	87.25	87.103	87.416	1.1265					27	12	3	0	0	0	0.031324	2	36288	36236;36288		85.357	10.934	1	16344000			12212	2733	6168	6193	14746;14747	14747					0.08128681905623125
IYLDGIITI	9	Unmodified	_IYLDGIITI_					0	0	0		ENST00000431099.3_1_9:160122-173274:-|nuORF;ENST00000495302.5_1_9:151417-166034:-|nuORF;ENST00000461037.2_9:69234942-69249581:-|nuORF;ENST00000476973.2_9:69243634-69261296:-|nuORF;ENST00000495626.2_9:69245151-69262487:-|nuORF;ENST00000492566.1_1_2:114195517-114220159:+|nuORF;ENST00000377445.5_9:69238165-69262487:-|nuORF;nc|ENSG00000215126|Q5RIA9-3|ZNG1E;nc|ENSG00000172785|Q9BRT8-2|ZNG1A;ENST00000358604.7_1_2:114196636-114253317:+|nuORF;nc|ENSG00000172785|Q9BRT8-3|ZNG1A;ENSG00000215126|ENST00000377391|ZNG1F;ENSG00000196873|ENST00000360171|ZNG1C;ENSG00000172785|ENST00000356521|ZNG1A;ENSG00000147996|ENST00000382405|ZNG1E;ENSG00000136682|ENST00000259199|ZNG1B	ENST00000431099.3_1_9:160122-173274:-|nuORF	ENST00000431099.3_1_9:160122-173274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1020.59581297636	1	1020.59757	1019.5903	3.5916	0.0036656	-4.4917	-0.0045843	-0.90016	-0.0009187	1020.5906816531674	85.736	0.26134	87.283	87.11	87.371	1.547					15	10	2	0	0	0	0.042029	1	36092	36092		74.423	6.3421	1	8523900			12213	2733	6168	6193	14748	14748					0.08128681905623125
IYLDLPQNF	9	Unmodified	_IYLDLPQNF_					0	0	0		ENST00000502341.5_1_5:141348723-141357950:+|nuORF;ENSG00000013561|ENST00000394520|RNF14	ENST00000502341.5_1_5:141348723-141357950:+|nuORF	ENST00000502341.5_1_5:141348723-141357950:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7969848513603	2	561.795132	1121.57571	2.4998	0.0014044	-0.2583	-0.00014511	2.2415	0.0012593	561.7954642229125	75.819	0.30611	77.113	76.912	77.218	1.2938					22	9	3	0	0	0	0.44535	1	31818	31818		18.135	1.1927	1	1995400			12214	585	6169	6194	14749	14749					0.019786097574751693
IYLDLPQNF	9	Unmodified	_IYLDLPQNF_					0	0	0		ENST00000502341.5_1_5:141348723-141357950:+|nuORF;ENSG00000013561|ENST00000394520|RNF14	ENST00000502341.5_1_5:141348723-141357950:+|nuORF	ENST00000502341.5_1_5:141348723-141357950:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7970458865166	2	561.795132	1121.57571	2.717	0.0015264	-1.0377	-0.000583	1.6792	0.00094339	561.7947160474582	75.363	0.24921	77.144	76.978	77.227	1.7817					12	7	2	0	0	0	0.22519	1	31605	31605		30.225	13.283	1	1415100			12215	585	6169	6194	14750	14750					0.019786097574751693
IYLDTHFRL	9	Unmodified	_IYLDTHFRL_					0	0	0		ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant;ZNFX1|p.R534Sfs*17|1|0.07|ENSG00000124201|chr20:49270210-49270211|-/TAGAAACCTAGAGTGAAGGCTCCGTCCCTTG|frameshift_variant;nc|ENSG00000124201|Q9P2E3-2|ZNFX1;ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant;ENSG00000124201|ENST00000396105|ZNFX1	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2168456912041	3	393.216991	1176.62914	0.48876	0.00019219	-0.60553	-0.0002381	-0.11676	-4.5914E-05	393.21647657504474	52.112	0.57053	53.509	53.265	53.836	1.3966					35	18	3	0	0	0	0.17733	2	21836	21785;21836		35.612	11.822	1	2474700			12216	2216	6170	6195	14751;14752	14752					0.04789407260000189
IYLDTHFRL	9	Unmodified	_IYLDTHFRL_					0	0	0		ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant;ZNFX1|p.R534Sfs*17|1|0.07|ENSG00000124201|chr20:49270210-49270211|-/TAGAAACCTAGAGTGAAGGCTCCGTCCCTTG|frameshift_variant;nc|ENSG00000124201|Q9P2E3-2|ZNFX1;ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant;ENSG00000124201|ENST00000396105|ZNFX1	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	ZNFX1|p.S394Lfs*12|1|0.07|ENSG00000124201|chr20:49270633-49270634|-/ATGTGGCATATATACACCACGGAATACTATGCAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.5519286990166	3	393.216991	1176.62914	0.25024	9.84E-05	-0.58489	-0.00022999	-0.33465	-0.00013159	393.2166042750811	51.5	0.43074	53.475	53.249	53.679	1.9753					25	14	2	0	0	0	0.17733	3	21527	21527;21575;21632		35.612	14.022	1	3841000			12217	2216	6170	6195	14753;14754;14755	14753					0.04789407260000189
IYLEVIHNL	9	Unmodified	_IYLEVIHNL_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10;ENST00000491074.5_1_2:183605037-183619453:+|nuORF;ENST00000418559.5_1_2:183605037-183617329:+|nuORF	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3208495974541	2	557.318774	1112.623	2.9111	0.0016224	0.20911	0.00011654	3.1202	0.001739	557.3181152992823	61.83	0.34557	63.248	63.02	63.365	1.4177					21	10	3	0	0	0	0.079895	1	25944	25944		56.177	30.778	1	1106500			12218	956	6171	6196	14756	14756					0.07118889028447484
IYLEVIHNL	9	Unmodified	_IYLEVIHNL_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10;ENST00000491074.5_1_2:183605037-183619453:+|nuORF;ENST00000418559.5_1_2:183605037-183617329:+|nuORF	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3192626833916	2	557.318774	1112.623	2.1703	0.0012096	-0.67979	-0.00037886	1.4906	0.00083071	557.3180202374637	61.264	0.37222	63.222	62.997	63.369	1.958					22	11	3	0	0	0	0.031377	1	25718	25718		85.272	43.177	1	1375900			12219	956	6171	6196	14757	14757					0.07118889028447484
IYLFLIPV	8	Unmodified	_IYLFLIPV_					0	0	0		tr|A0A7D7A754|A0A7D7A754_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13785PE=4SV=1	tr|A0A7D7A754|A0A7D7A754_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13785PE=4SV=1	tr|A0A7D7A754|A0A7D7A754_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13785PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3096801638603	2	489.307147	976.599741	2.6725	0.0013077	1.9033	0.00093129	4.5758	0.0022389	489.30790173443813	73.163	0.44254	74.973	74.703	75.146	1.8101					25	13	3	0	0	0	0.88958	1	30644	30644		2.8892	0	1	6255800			12220	17315	6172	6197	14758	14758					0.11050494981805059
IYLKVQQEL	9	Unmodified	_IYLKVQQEL_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3333007693291	2	567.331882	1132.64921	2.2377	0.0012695	0.13917	7.8956E-05	2.3769	0.0013485	567.3319407940987	41.625	0.57188	42.95	42.524	43.096	1.3254					29	17	3	0	0	0	0.15635	1	17435	17435		37.974	3.7867	1	1013800			12221	1837	6173	6198	14759	14759					0.0881915819995811
IYLKVQQEL	9	Unmodified	_IYLKVQQEL_					0	0	0		ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	ENSG00000113716|ENST00000502717|HMGXB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	567.331882	1132.64921	1.992	0.0011301	0.70292	0.00039879	2.6949	0.0015289	567.3318900643968	41.189	0.2858	43.081	42.864	43.15	1.8927	0.065658	0.0002879	NaN	37.974	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1038600			12222	1837	6173	6198							0.0881915819995811
IYLNNIIPRF	10	Unmodified	_IYLNNIIPRF_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.8685790896416	2	631.866423	1261.71829	2.8544	0.0018036	0.083205	5.2575E-05	2.9376	0.0018562	631.8663556646477	74.822	0.43291	76.129	75.847	76.28	1.3063					27	13	3	0	0	0	0.052963	1	31379	31379		88.954	59.872	1	1271200			12223	4221	6174	6199	14760	14760					0.09790242219492029
IYLNNIIPRF	10	Unmodified	_IYLNNIIPRF_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.8681518435478	2	631.866423	1261.71829	2.4686	0.0015599	0.1473	9.3071E-05	2.6159	0.0016529	631.8663693024727	74.286	0.34612	76.082	75.929	76.275	1.7962					23	10	3	0	0	0	0.066517	1	31168	31168		71.922	46.523	1	713960			12224	4221	6174	6199	14761	14761					0.09790242219492029
IYLNSSLVQF	10	Unmodified	_IYLNSSLVQF_					0	0	0		PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant;ENSG00000011405|ENST00000691414|PIK3C2A	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3231078982353	2	592.321514	1182.62847	3.3626	0.0019917	-0.26927	-0.00015949	3.0933	0.0018322	592.3212660228895	74.436	0.327	75.754	75.561	75.888	1.318					31	10	4	0	0	0	0.059378	2	31204	31204;31253		74.929	14.248	1	4648000			12225	570	6175	6200	14762;14763	14762					0.04446567820264136
IYLNSSLVQF	10	Unmodified	_IYLNSSLVQF_					0	0	0		PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant;ENSG00000011405|ENST00000691414|PIK3C2A	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3230468630791	2	592.321514	1182.62847	3.0722	0.0018197	-0.62303	-0.00036903	2.4491	0.0014507	592.3212178040422	73.988	0.39037	75.784	75.567	75.957	1.7962					33	12	3	0	0	0	0.057404	2	31048	31000;31048		75.761	37.521	1	3975200			12226	570	6175	6200	14764;14765	14765					0.04446567820264136
IYLPEVRKI	9	Unmodified	_IYLPEVRKI_					0	0	0		nc|ENSG00000130338|Q9NRJ4-2|TULP4;ENSG00000130338|ENST00000367097|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5693542361259	3	377.569253	1129.68593	0.86243	0.00032563	-0.65141	-0.00024595	0.21103	7.9677E-05	377.568969353422	38.579	0.62495	39.875	39.413	40.038	1.2961					56	20	4	0	0	0	0.099383	3	16212	16121;16168;16212		49.527	21.033	1	12801000			12227	2427	6176	6201	14766;14767;14768	14768					0.126274548164929
IYLPEVRKI	9	Unmodified	_IYLPEVRKI_					0	0	0		nc|ENSG00000130338|Q9NRJ4-2|TULP4;ENSG00000130338|ENST00000367097|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8520385622978	2	565.850242	1129.68593	1.7772	0.0010056	-0.31884	-0.00018041	1.4584	0.00082522	565.8500304373603	38.548	0.26267	39.844	39.712	39.974	1.2961					12	8	2	0	0	0	0.52273	1	16177	16177		14.838	0	1	659370			12228	2427	6176	6201	14769	14769					0.126274548164929
IYLPEVRKI	9	Unmodified	_IYLPEVRKI_					0	0	0		nc|ENSG00000130338|Q9NRJ4-2|TULP4;ENSG00000130338|ENST00000367097|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5689880251884	3	377.569253	1129.68593	0.58514	0.00022093	-0.95821	-0.00036179	-0.37307	-0.00014086	377.5688635258588	37.981	0.60121	39.801	39.403	40.004	1.8202					55	19	4	0	0	0	0.16434	3	15879	15879;15924;15975		37.075	13.285	1	14190000			12229	2427	6176	6201	14770;14771;14772	14770					0.126274548164929
IYLPYLHEW	9	Unmodified	_IYLPYLHEW_					0	0	0		ENST00000545247.6_1_11:18505612-18548363:-|nuORF;ENST00000543087.5_1_11:18512432-18536353:-|nuORF;ENSG00000074319|ENST00000251968|TSG101	ENST00000545247.6_1_11:18505612-18548363:-|nuORF	ENST00000545247.6_1_11:18505612-18548363:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3199340701103	2	617.318774	1232.623	1.5822	0.00097673	-0.25391	-0.00015674	1.3283	0.00081998	617.3186935873159	71.548	0.80254	72.89	72.601	73.403	1.3415					81	25	5	0	0	0	0.00029988	5	30007	29960;30007;30057;30099;30154		137.59	80.114	1	17361000			12230	913	6177	6202	14773;14774;14775;14776;14777	14774					0.015988890284461377
IYLPYLHEW	9	Unmodified	_IYLPYLHEW_					0	0	0		ENST00000545247.6_1_11:18505612-18548363:-|nuORF;ENST00000543087.5_1_11:18512432-18536353:-|nuORF;ENSG00000074319|ENST00000251968|TSG101	ENST00000545247.6_1_11:18505612-18548363:-|nuORF	ENST00000545247.6_1_11:18505612-18548363:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3188354372978	2	617.318774	1232.623	0.98402	0.00060746	0.38965	0.00024054	1.3737	0.000848	617.3191222377046	71.044	0.96165	72.868	72.608	73.57	1.824					79	30	4	0	0	0	0.00029988	5	29846	29764;29807;29846;29886;29931		137.59	80.114	1	16935000			12231	913	6177	6202	14778;14779;14780;14781;14782	14780					0.015988890284461377
IYLPYLQNW	9	Unmodified	_IYLPYLQNW_					0	0	0		ENST00000535340.5_1_11:18591643-18610207:-|nuORF;nc|ENSG00000151116|Q8IX04-5|UEVLD;nc|ENSG00000151116|Q8IX04-4|UEVLD;nc|ENSG00000151116|Q8IX04-3|UEVLD;nc|ENSG00000151116|Q8IX04-2|UEVLD;nc|ENSG00000151116|Q8IX04-6|UEVLD;ENSG00000151116|ENST00000396197|UEVLD	ENST00000535340.5_1_11:18591643-18610207:-|nuORF	ENST00000535340.5_1_11:18591643-18610207:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3213989138603	2	605.318774	1208.623	5.4444	0.0032956	0.47447	0.00028721	5.9189	0.0035828	605.3190149145405	88.325	0.73474	89.381	88.859	89.594	1.0562					52	22	4	0	0	0	0.0024698	4	37194	37146;37194;37233;37276		129.2	64.964	1	12019000			12232	3277	6178	6203	14783;14784;14785;14786	14784					0.02702889028455502
IYLPYLQNW	9	Unmodified	_IYLPYLQNW_					0	0	0		ENST00000535340.5_1_11:18591643-18610207:-|nuORF;nc|ENSG00000151116|Q8IX04-5|UEVLD;nc|ENSG00000151116|Q8IX04-4|UEVLD;nc|ENSG00000151116|Q8IX04-3|UEVLD;nc|ENSG00000151116|Q8IX04-2|UEVLD;nc|ENSG00000151116|Q8IX04-6|UEVLD;ENSG00000151116|ENST00000396197|UEVLD	ENST00000535340.5_1_11:18591643-18610207:-|nuORF	ENST00000535340.5_1_11:18591643-18610207:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.3222534060478	2	605.318774	1208.623	4.695	0.002842	-0.16557	-0.00010022	4.5295	0.0027418	605.3189907973127	87.851	0.73331	89.301	88.938	89.671	1.45					59	22	4	0	0	0	0.00029988	4	37009	36962;37009;37048;37088		137.59	74.427	1	11305000			12233	3277	6178	6203	14787;14788;14789;14790	14788					0.02702889028455502
IYLQLKNQI	9	Unmodified	_IYLQLKNQI_					0	0	0		tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.8414794802666	2	566.839874	1131.66519	2.6168	0.0014833	-2.1992	-0.0012466	0.41765	0.00023674	566.838022219153	76.542	0.46861	77.835	77.699	78.168	1.2938					24	14	3	0	0	0	0.46905	1	32134	32134		16.942	1.0951	1	1861200			12234	16951	6179	6204	14791	14791					0.10462864436840391
IYLQLKNQI	9	Unmodified	_IYLQLKNQI_					0	0	0		tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	tr|A0A7D6VUN2|A0A7D6VUN2_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02265PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	566.839874	1131.66519	2.7694	0.0015698	-3.3674	-0.0019088	-0.59803	-0.00033899	566.840973848811	75.983	0.37512	77.75	77.597	77.972	1.7672	-0.042578	-0.00080856	NaN	16.942	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1744500			12235	16951	6179	6204							0.10462864436840391
IYLRDPVQV	9	Unmodified	_IYLRDPVQV_					0	0	0		nc|ENSG00000134900|P29144|TPP2;ENSG00000134900|ENST00000376052|TPP2	nc|ENSG00000134900|P29144|TPP2	nc|ENSG00000134900|P29144|TPP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.2827636599541	2	551.816399	1101.61824	1.6658	0.00091924	0.64167	0.00035408	2.3075	0.0012733	551.8166893679038	43.439	0.24111	44.792	44.677	44.918	1.3536					13	7	2	0	0	0	0.056931	1	18230	18230		47.594	13.492	1	1151700			12236	2641	6180	6205	14792	14792					0.07150004885693306
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5949584841728	3	377.59351	1129.7587	1.8094	0.00068323	0.57115	0.00021566	2.3806	0.00089889	377.5936159427635	64.015	0.59618	65.423	65.174	65.77	1.4071					56	18	4	0	0	0	0.13873	1	26800	26800		43.772	23.358	1	3797300			12237	761	6181	6206	14793	14793					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8873779177666	2	565.886627	1129.7587	2.8373	0.0016056	-0.24858	-0.00014067	2.5888	0.0014649	565.886463605561	64.016	1.2777	65.423	65.174	66.452	1.4071					80	40	3	0	0	0	0.04145	3	26826	26826;26879;26982		74.929	36.955	1	2571100			12238	761	6181	6206	14794;14795;14796	14794					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5942870974541	3	377.59351	1129.7587	2.1554	0.00081385	0.092846	3.5058E-05	2.2482	0.00084891	377.59336211595166	64.686	1.4852	66.093	65.77	67.255	1.4071					117	47	4	0	0	0	0.066815	9	27272	27012;27056;27114;27165;27212;27272;27324;27399;27451		63.961	27.454	1	2618700			12239	761	6181	6206	14797;14798;14799;14800;14801;14802;14803;14804;14805	14802					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8886596560478	2	565.886627	1129.7587	2.8079	0.0015889	-1.3439	-0.00076048	1.464	0.00082845	565.8858925248365	65.041	1.1448	66.44	66.255	67.399	1.3989					66	36	2	0	0	0	0.057024	1	27220	27220		65.235	32.93	1	1582700			12240	761	6181	6206	14806	14806					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5938598513603	3	377.59351	1129.7587	1.1098	0.00041905	0.002287	8.6357E-07	1.1121	0.00041991	377.59348360736703	66.104	1.839	67.493	67.237	69.076	1.3888					93	59	2	0	0	0	0.39927	3	27792	27792;27986;28052		19.362	11.753	1	1715200			12241	761	6181	6206	14807;14808;14809	14807					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8878051638603	2	565.886627	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.644	1	66.051	65.551	66.551	1.4071								0	0	0	0.026243	1	27112	27112		74.929	20.155	1				12242	761	6181	6206	14810	14810					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8874999880791	2	565.886627	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.776	1	66.184	65.684	66.684	1.4071								0	0	0	0.035377	1	27168	27168		68.081	28.123	1				12243	761	6181	6206	14811	14811					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8876830935478	2	565.886627	1129.7587	2.6681	0.0015098	-0.31877	-0.00018039	2.3493	0.0013295	565.8861948501485	63.563	1.6034	65.508	65.183	66.787	1.9444					74	50	2	0	0	0	0.04145	4	26631	26586;26631;26684;26750		74.929	42.624	1	2213400			12244	761	6181	6206	14812;14813;14814;14815	14813					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5938903689384	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.304	1	65.249	64.749	65.749	1.9444								0	0	0	0.072365	1	26563	26563		43.772	24.41	1				12245	761	6181	6206	14816	14816					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5938293337822	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.436	1	65.38	64.88	65.88	1.9444								0	0	0	2.8511E-05	1	26616	26616		99.755	55.983	1				12246	761	6181	6206	14817	14817					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5943481326103	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.567	1	65.512	65.012	66.012	1.9444								0	0	0	2.8511E-05	1	26669	26669		99.755	55.983	1				12247	761	6181	6206	14818	14818					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5946227908134	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.997	1	65.925	65.425	66.425	1.928								0	0	0	0.18991	1	26851	26851		31.268	16.02	1				12248	761	6181	6206	14819	14819					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5944396853447	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.112	1	66.04	65.54	66.54	1.928								0	0	0	0.042463	1	26898	26898		43.772	17.504	1				12249	761	6181	6206	14820	14820					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8884155154228	2	565.886627	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.127	1	66.055	65.555	66.555	1.928								0	0	0	0.041747	1	26904	26904		46.021	19.137	1				12250	761	6181	6206	14821	14821					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5940429568291	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.246	1	66.174	65.674	66.674	1.928								0	0	0	0.042463	1	26954	26954		51.63	25.362	1				12251	761	6181	6206	14822	14822					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8872558474541	2	565.886627	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.253	1	66.181	65.681	66.681	1.928								0	0	0	0.05056	1	26957	26957		58.679	30.192	1				12252	761	6181	6206	14823	14823					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5941345095634	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.377	1	66.305	65.805	66.805	1.928								0	0	0	0.0475	1	27009	27009		57.722	31.454	1				12253	761	6181	6206	14824	14824					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5943481326103	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.493	1	66.421	65.921	66.921	1.928								0	0	0	0.082379	1	27056	27056		28.495	14.089	1				12254	761	6181	6206	14825	14825					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5939514040947	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.763	1	66.691	66.191	67.191	1.928								0	0	0	0.18991	1	27166	27166		24.991	10.586	1				12255	761	6181	6206	14826	14826					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5942260622978	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.877	1	66.794	66.294	67.294	1.917								0	0	0	0.29347	1	27213	27213		13.615	3.4643	1				12256	761	6181	6206	14827	14827					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5939514040947	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.004	1	66.913	66.413	67.413	1.9085								0	0	0	0.27791	1	27267	27267		19.362	4.1135	1				12257	761	6181	6206	14828	14828					0.19901208609940113
IYLRLLVKL	9	Unmodified	_IYLRLLVKL_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5932189822197	3	377.59351	1129.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.833	1	67.741	67.241	68.241	1.9085								0	0	0	0.26021	1	27618	27618		20.415	9.615	1				12258	761	6181	6206	14829	14829					0.19901208609940113
IYLTFPVAM	9	Oxidation (M)	_IYLTFPVAM(Oxidation (M))_		IYLTFPVAM(1)		IYLTFPVAM(60)	0	0	1		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7838012576103	2	535.783179	1069.5518	1.7994	0.00096411	-1.5999	-0.00085722	0.19951	0.00010689	535.7833399824248	71.634	0.76728	72.976	72.512	73.279	1.3415					27	16	2	0	0	0	0.070759	1	30074	30074		59.795	10.126	1	2799000			12259	5302	6182	6207	14830	14830		97			0.019810529994401804
IYLTFPVAM	9	Unmodified	_IYLTFPVAM_					0	0	0		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7875854372978	2	527.785721	1053.55689	5.4639	0.0028838	-0.74422	-0.00039279	4.7196	0.002491	527.7852868825738	88.261	0.44927	89.317	89.049	89.498	1.0562					41	13	4	0	0	0	0.020661	4	37195	37149;37195;37234;37279		98.807	70.32	1	6492800			12260	5302	6182	6208	14831;14832;14833;14834	14832					0.03225356862071749
IYLTFPVAM	9	Unmodified	_IYLTFPVAM_					0	0	0		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1054.568652331829	1	1054.56417	1053.55689	5.7681	0.0060828	-3.2739	-0.0034525	2.4942	0.0026303	1054.5629267780694	88.232	0.35352	89.288	89.113	89.466	1.0562					21	10	3	0	0	0	0.046105	1	37196	37196		70.865	28.77	1	4954100			12261	5302	6182	6208	14835	14835					0.03225356862071749
IYLTFPVAM	9	Unmodified	_IYLTFPVAM_					0	0	0		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7883178591728	2	527.785721	1053.55689	4.7926	0.0025295	-0.039994	-2.1108E-05	4.7526	0.0025084	527.7855652475185	87.821	0.44733	89.316	89.11	89.557	1.4953					42	13	4	0	0	0	0.027877	3	37011	36971;37011;37051		90.836	34.295	1	8211900			12262	5302	6182	6208	14836;14837;14838	14837					0.03225356862071749
IYLTFPVAM	9	Unmodified	_IYLTFPVAM_					0	0	0		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.569995105267	1	1054.56417	1053.55689	5.4968	0.0057967	-2.6159	-0.0027586	2.8809	0.0030381	1054.5617618769118	87.801	0.38242	89.296	89.11	89.492	1.4953					23	11	3	0	0	0	0.04206	2	36999	36999;37052		74.396	32.302	1	3936800			12263	5302	6182	6208	14839;14840	14839					0.03225356862071749
IYLTFPVAMF	10	Oxidation (M)	_IYLTFPVAM(Oxidation (M))F_		IYLTFPVAM(1)F		IYLTFPVAM(64)F	0	0	1		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3190185427666	2	609.317386	1216.62022	4.098	0.002497	-0.64433	-0.0003926	3.4537	0.0021044	609.3168882362096	92.356	0.32651	93.292	93.114	93.44	0.93623					17	9	2	0	0	0	0.10239	1	38877	38877		63.563	27.519	1	954330			12264	5302	6183	6209	14841	14841		97			0.02057297579290207
IYLTFPVAMF	10	Oxidation (M)	_IYLTFPVAM(Oxidation (M))F_		IYLTFPVAM(1)F		IYLTFPVAM(71)F	0	0	1		ENST00000601829.1_1_19:7694719-7695635:+|nuORF;ENSG00000229833|ENST00000594797|PET100	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	ENST00000601829.1_1_19:7694719-7695635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3184692263603	2	609.317386	1216.62022	3.2421	0.0019755	-0.063447	-3.866E-05	3.1786	0.0019368	609.316463062925	91.933	0.31893	93.26	93.054	93.373	1.3269					24	9	3	0	0	0	0.069382	1	38702	38702		70.716	28.621	1	1318200			12265	5302	6183	6209	14842	14842		97			0.02057297579290207
IYLYVCAPSS	10	Carbamidomethyl (C)	_IYLYVC(Carbamidomethyl (C))APSS_	IYLYVC(1)APSS		IYLYVC(48)APSS		0	1	0			REV__ENST00000470841.1_1_1:161681590-161683167:+|nuORF	REV__ENST00000470841.1_1_1:161681590-161683167:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7878295779228	2	586.78645	1171.55835	3.2393	0.0019008	-1.7459	-0.0010245	1.4934	0.00087628	586.7852460725672	94.35	0.47083	95.538	95.302	95.773	1.1887					46	14	4	0	0	0	0.20516	1	39735	39735		48.346	8.3885	1	9870500	+		12266	13280	6184	6210	14843	14843	24				-0.02057053839848777
IYMDTLNIF	9	Oxidation (M)	_IYM(Oxidation (M))DTLNIF_		IYM(1)DTLNIF		IYM(60)DTLNIF	0	0	1		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.2811767458916	2	573.281	1144.54745	2.9209	0.0016745	-0.7475	-0.00042853	2.1734	0.001246	573.2807899828291	70.853	0.40279	72.206	72.002	72.405	1.3536					37	12	4	0	0	0	0.069258	2	29701	29701;29747		60.39	29.753	1	6995500			12267	3852	6185	6211	14844;14845	14844		64			-0.019044562141289134
IYMDTLNIF	9	Oxidation (M)	_IYM(Oxidation (M))DTLNIF_		IYM(1)DTLNIF		IYM(74)DTLNIF	0	0	1		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.2817870974541	2	573.281	1144.54745	1.7779	0.0010192	-0.69094	-0.0003961	1.0869	0.00062311	573.2806133159265	70.345	0.43124	72.183	72.01	72.441	1.8378					29	13	3	0	0	0	0.042029	2	29516	29516;29568		74.423	32.328	1	3278400			12268	3852	6185	6211	14846;14847	14846		64			-0.019044562141289134
IYMDTLNIF	9	Unmodified	_IYMDTLNIF_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.2832519412041	2	565.283543	1128.55253	1.742	0.00098473	0.24332	0.00013754	1.9853	0.0011223	565.2839286943101	84.289	0.46272	85.448	85.224	85.687	1.159					42	14	4	0	0	0	0.075994	3	35328	35328;35375;35426		74.423	34.465	1	13569000			12269	3852	6185	6212	14848;14849;14850	14848					-0.0066015235152008245
IYMDTLNIF	9	Unmodified	_IYMDTLNIF_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1129.563159167767	1	1129.55981	1128.55253	1.3043	0.0014733	0.87345	0.00098662	2.1777	0.0024599	1129.5615859874124	84.267	0.3437	85.426	85.279	85.622	1.159					23	10	3	0	0	0	0.053939	1	35385	35385		85.357	10.428	1	8373300			12270	3852	6185	6212	14851	14851					-0.0066015235152008245
IYMDTLNIF	9	Unmodified	_IYMDTLNIF_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2843505740166	2	565.283543	1128.55253	1.8609	0.0010519	0.25998	0.00014696	2.1209	0.0011989	565.2837495264466	83.793	0.4322	85.431	85.221	85.653	1.6379					38	13	4	0	0	0	0.063746	1	35109	35109		60.39	0	1	11558000			12271	3852	6185	6212	14852	14852					-0.0066015235152008245
IYMDTLNIF	9	Unmodified	_IYMDTLNIF_					0	0	0		ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	ENSG00000165678|ENST00000372134|GHITM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1129.565356433392	1	1129.55981	1128.55253	1.7265	0.0019502	3.0177	0.0034087	4.7443	0.0053589	1129.561037681361	83.803	0.37006	85.441	85.253	85.623	1.6379					16	11	2	0	0	0	0.053939	2	35172	35125;35172		85.357	10.428	1	6642000			12272	3852	6185	6212	14853;14854	14854					-0.0066015235152008245
IYMNWKAVF	9	Unmodified	_IYMNWKAVF_					0	0	0		ENST00000294383.6_1_1:55643723-55643801:-|nuORF	ENST00000294383.6_1_1:55643723-55643801:-|nuORF	ENST00000294383.6_1_1:55643723-55643801:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3033935427666	2	586.30207	1170.58959	2.1343	0.0012513	3.3655	0.0019732	5.4997	0.0032245	586.8073805293728	68.161	0.43422	69.539	69.303	69.737	1.3778					22	13	2	0	0	0	0.13873	1	28632	28632		39.957	22.871	1	2051000			12273	5729	6186	6213	14855	14855					0.011115639849094805
IYMNWKAVF	9	Unmodified	_IYMNWKAVF_					0	0	0		ENST00000294383.6_1_1:55643723-55643801:-|nuORF	ENST00000294383.6_1_1:55643723-55643801:-|nuORF	ENST00000294383.6_1_1:55643723-55643801:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3031494021416	2	586.30207	1170.58959	1.6174	0.00094829	2.5245	0.0014801	4.1419	0.0024284	586.3024288774183	67.604	0.37264	69.474	69.238	69.611	1.87					19	11	2	0	0	0	0.24063	1	28333	28333		28.487	11.4	1	1998500			12274	5729	6186	6213	14856	14856					0.011115639849094805
IYMPMIPEL	9	Unmodified	_IYMPMIPEL_					0	0	0		ENST00000481284.5_1_20:33462930-33515014:+|nuORF;ENSG00000131069|ENST00000360596|ACSS2;nc|ENSG00000131069|Q9NR19-2|ACSS2	ENST00000481284.5_1_20:33462930-33515014:+|nuORF	ENST00000481284.5_1_20:33462930-33515014:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7861205935478	2	553.784864	1105.55518	4.0321	0.0022329	-2.6986	-0.0014945	1.3335	0.00073847	553.7853622335352	91.323	0.44067	92.305	92.039	92.48	0.98157					22	13	3	0	0	0	0.052478	1	38461	38461		67.035	45.289	1	1741600			12275	2479	6187	6214	14857	14857					0.0066197978180753125
IYMPMIPEL	9	Unmodified	_IYMPMIPEL_					0	0	0		ENST00000481284.5_1_20:33462930-33515014:+|nuORF;ENSG00000131069|ENST00000360596|ACSS2;nc|ENSG00000131069|Q9NR19-2|ACSS2	ENST00000481284.5_1_20:33462930-33515014:+|nuORF	ENST00000481284.5_1_20:33462930-33515014:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7878295779228	2	553.784864	1105.55518	3.5832	0.0019843	-2.3388	-0.0012952	1.2444	0.00068911	553.7852370761738	90.879	0.38112	92.245	91.961	92.342	1.366					17	11	3	0	0	0	0.070759	2	38237	38237;38283		59.795	34.795	1	1497900			12276	2479	6187	6214	14858;14859	14858					0.0066197978180753125
IYNEQLGFT	9	Unmodified	_IYNEQLGFT_					0	0	0			REV__nc|ENSG00000013374|Q9Y5A7-2|NUB1	REV__nc|ENSG00000013374|Q9Y5A7-2|NUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.7716552615166	2	542.769114	1083.52368	2.7254	0.0014792	3.4277	0.0018605	6.1531	0.0033397	542.771356587559	73.57	0.52802	75.366	74.943	75.471	1.7962					24	16	2	0	0	0	0.37357	1	30763	30763		21.747	3.6117	1	1142100	+		12277	8542	6188	6215	14860	14860					-0.014745536562713824
IYNGDMEKI	9	Unmodified	_IYNGDMEKI_					0	0	0		ENST00000550043.1_1_14:28733783-28734191:+|nuORF;ENSG00000176171|ENST00000368636|BNIP3;BNIP3-ABI1|1|fusion;BNIP3-ABI1|2|fusion;BNIP3-ABI1|3|fusion;BNIP3-ABI1|8|fusion;BNIP3-ABI1|6|fusion;BNIP3-ABI1|4|fusion;BNIP3-ABI1|7|fusion;BNIP3-ABI1|5|fusion	ENST00000550043.1_1_14:28733783-28734191:+|nuORF	ENST00000550043.1_1_14:28733783-28734191:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7628661990166	2	541.762975	1081.5114	1.2782	0.00069249	-3.1071	-0.0016833	-1.8289	-0.00099083	541.7620454675167	25.97	0.34016	27.229	27.049	27.389	1.2594					23	10	3	0	0	0	0.050451	1	10868	10868		67.838	13.065	1	3002200			12278	106	6189	6216	14861	14861					-0.0260991339098382
IYNGDMEKI	9	Unmodified	_IYNGDMEKI_					0	0	0		ENST00000550043.1_1_14:28733783-28734191:+|nuORF;ENSG00000176171|ENST00000368636|BNIP3;BNIP3-ABI1|1|fusion;BNIP3-ABI1|2|fusion;BNIP3-ABI1|3|fusion;BNIP3-ABI1|8|fusion;BNIP3-ABI1|6|fusion;BNIP3-ABI1|4|fusion;BNIP3-ABI1|7|fusion;BNIP3-ABI1|5|fusion	ENST00000550043.1_1_14:28733783-28734191:+|nuORF	ENST00000550043.1_1_14:28733783-28734191:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7625610232353	2	541.762975	1081.5114	0.68417	0.00037066	-2.8757	-0.0015579	-2.1915	-0.0011873	541.7619120908834	25.573	0.27745	27.289	27.119	27.397	1.7167					18	8	3	0	0	0	0.046715	2	10679	10679;10721		70.332	9.6225	1	4195500			12279	106	6189	6216	14862;14863	14862					-0.0260991339098382
IYNGKLFDLL	10	Unmodified	_IYNGKLFDLL_					0	0	0		ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C;KIF2C|p.V491Rfs*6|1|0.33|ENSG00000142945|chr1:44760383-44760384|GT/-|frameshift_variant	ENSG00000142945|ENST00000372224|KIF2C	ENSG00000142945|ENST00000372224|KIF2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.3427001833916	2	598.339707	1194.66486	2.5015	0.0014967	-0.14979	-8.9626E-05	2.3517	0.0014071	598.3401638036089	72.255	0.40032	73.585	73.391	73.792	1.3298					26	12	3	0	0	0	0.13797	1	30312	30312		57.249	15.294	1	2458500			12280	3009	6190	6217	14864	14864					0.0753144471698306
IYNGKLFDLL	10	Unmodified	_IYNGKLFDLL_					0	0	0		ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C;KIF2C|p.V491Rfs*6|1|0.33|ENSG00000142945|chr1:44760383-44760384|GT/-|frameshift_variant	ENSG00000142945|ENST00000372224|KIF2C	ENSG00000142945|ENST00000372224|KIF2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3403198122978	2	598.339707	1194.66486	2.3424	0.0014016	0.57369	0.00034326	2.9161	0.0017448	598.3399921444108	71.794	0.37474	73.618	73.381	73.756	1.824					23	11	3	0	0	0	0.070292	2	30077	30077;30125		70.332	32.156	1	1930700			12281	3009	6190	6217	14865;14866	14865					0.0753144471698306
IYNGQLFNNL	10	Unmodified	_IYNGQLFNNL_					0	0	0		nc|ENSG00000165533|Q8TAM2-2|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2|TTC8	nc|ENSG00000165533|Q8TAM2-2|TTC8	nc|ENSG00000165533|Q8TAM2-2|TTC8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.3107787966728	2	598.308938	1194.60332	2.9128	0.0017428	0.92969	0.00055624	3.8425	0.002299	598.3095765366656	62.174	0.31832	63.592	63.365	63.683	1.4177					20	9	3	0	0	0	0.047799	1	26076	26076		85.272	48.766	1	1502500			12282	3846	6191	6218	14867	14867					0.013805130177161118
IYNGQLFNNL	10	Unmodified	_IYNGQLFNNL_					0	0	0		nc|ENSG00000165533|Q8TAM2-2|TTC8;nc|ENSG00000165533|Q8TAM2-3|TTC8;ENSG00000165533|ENST00000380656|TTC8;nc|ENSG00000165533|Q8TAM2|TTC8	nc|ENSG00000165533|Q8TAM2-2|TTC8	nc|ENSG00000165533|Q8TAM2-2|TTC8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3112670779228	2	598.308938	1194.60332	2.4972	0.0014941	1.3738	0.00082197	3.871	0.002316	598.3100501691584	61.574	0.31866	63.532	63.4	63.719	1.9571					20	9	3	0	0	0	0.076926	1	25853	25853		68.081	37.444	1	1420800			12283	3846	6191	6218	14868	14868					0.013805130177161118
IYNIAKAIDI	10	Unmodified	_IYNIAKAIDI_					0	0	0		tr|A0A7D6ZHD8|A0A7D6ZHD8_9CLOTN-acetylmuramicacid6-phosphateetheraseOS=ClostridiumintestinaleOX=36845GN=murQPE=3SV=1	tr|A0A7D6ZHD8|A0A7D6ZHD8_9CLOTN-acetylmuramicacid6-phosphateetheraseOS=ClostridiumintestinaleOX=36845GN=murQPE=3SV=1	tr|A0A7D6ZHD8|A0A7D6ZHD8_9CLOTN-acetylmuramicacid6-phosphateetheraseOS=ClostridiumintestinaleOX=36845GN=murQPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3314086794853	2	567.331882	1132.64921	1.3794	0.00078255	-2.7982	-0.0015875	-1.4188	-0.00080495	567.3305498186903	71.32	1.1118	73.144	72.458	73.57	1.824					57	35	2	0	0	0	0.87699	1	29947	29947		3.9444	0	1	3066800			12284	17084	6192	6219	14869	14869					0.08819158199935373
IYNLSNFYKL	10	Unmodified	_IYNLSNFYKL_					0	0	0		tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.8458740115166	2	637.842613	1273.67067	2.1486	0.0013704	1.8698	0.0011926	4.0183	0.0025631	637.843565983016	77.21	0.31995	78.491	78.281	78.601	1.2809					19	9	3	0	0	0	0.77604	1	32415	32415		14.838	1.7958	1	1665500			12285	17072	6193	6220	14870	14870					0.04478543228651688
IYNLSNFYKL	10	Unmodified	_IYNLSNFYKL_					0	0	0		tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.8442260622978	2	637.842613	1273.67067	1.8546	0.0011829	1.9187	0.0012239	3.7733	0.0024068	637.8437347564978	76.698	0.28606	78.465	78.321	78.608	1.7672					20	8	3	0	0	0	0.77604	1	32178	32178		14.838	0.93222	1	1927900			12286	17072	6193	6220	14871	14871					0.04478543228651688
IYNLSNFYKL	10	Unmodified	_IYNLSNFYKL_					0	0	0		tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	tr|A0A7D6ZGF2|A0A7D6ZGF2_9CLOTYokE-likePHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22015PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	637.842613	1273.67067	1.8546	0.0011829	1.9187	0.0012239	3.7733	0.0024068	637.8437347564978	76.698	0.28606	78.465	78.321	78.608	1.7672	-0.012759	3.0992E-05	NaN	14.838	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1927900			12287	17072	6193	6220							0.04478543228651688
IYNQIAELW	9	Unmodified	_IYNQIAELW_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3026000857353	2	575.300581	1148.58661	3.1793	0.0018291	-1.8078	-0.0010401	1.3715	0.00078901	575.3000812429049	74.594	0.55223	75.901	75.728	76.28	1.3063					38	17	3	0	0	0	0.10294	1	31321	31321		48.346	25.197	1	3140000			12288	2458	6194	6221	14872	14872					0.018260121317553057
IYNQIAELW	9	Unmodified	_IYNQIAELW_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3013793826103	2	575.300581	1148.58661	3.0045	0.0017285	-0.53972	-0.0003105	2.4648	0.001418	575.3008150104273	74.145	0.52477	75.941	75.717	76.242	1.7962					35	16	3	0	0	0	0.076627	1	31103	31103		57.471	28.985	1	4455100			12289	2458	6194	6221	14873	14873					0.018260121317553057
IYNQVKQII	9	Unmodified	_IYNQVKQII_					0	0	0		nc|ENSG00000075711|Q12959-8|DLG1;PAK2-DLG1|3|fusion;PAK2-DLG1|5|fusion;nc|ENSG00000075711|Q12959-7|DLG1;nc|ENSG00000075711|Q12959|DLG1;PAK2-DLG1|6|fusion;ENSG00000075711|ENST00000667157|DLG1;nc|ENSG00000075711|Q12959-6|DLG1;PAK2-DLG1|1|fusion;PAK2-DLG1|4|fusion;nc|ENSG00000075711|Q12959-9|DLG1;nc|ENSG00000075711|Q12959-3|DLG1;PAK2-DLG1|7|fusion;PAK2-DLG1|9|fusion;PAK2-DLG1|2|fusion;PAK2-DLG1|10|fusion;nc|ENSG00000075711|Q12959-5|DLG1;PAK2-DLG1|8|fusion;nc|ENSG00000075711|Q12959-2|DLG1	nc|ENSG00000075711|Q12959-8|DLG1	nc|ENSG00000075711|Q12959-8|DLG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8325683474541	2	559.832049	1117.64954	0.32525	0.00018209	0.050262	2.8138E-05	0.37551	0.00021022	559.8321944145434	35.76	0.20351	37.035	36.923	37.126	1.2746					17	14	2	0	0	0	0.066815	1	15020	15020		61.357	21.4	1	2113600			12290	940	6195	6222	14874	14874					0.09542577919796713
IYPDIQGLVL	10	Unmodified	_IYPDIQGLVL_					0	0	0		tr|A0A7D6VSU1|A0A7D6VSU1_9CLOTFRGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06480PE=4SV=1	tr|A0A7D6VSU1|A0A7D6VSU1_9CLOTFRGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06480PE=4SV=1	tr|A0A7D6VSU1|A0A7D6VSU1_9CLOTFRGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06480PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8280517458916	2	565.826432	1129.63831	1.5209	0.00086058	-1.3346	-0.00075517	0.18629	0.00010541	565.8259006519576	84.02	0.31999	85.208	85.05	85.37	1.1879					18	10	2	0	0	0	0.41677	1	35292	35292		32.305	2.4649	1	2267200			12291	16887	6196	6223	14875	14875					0.0786775582566861
IYPDSFTVL	9	Unmodified	_IYPDSFTVL_					0	0	0		ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1054.548632800579	1	1054.54554	1053.53826	3.2616	0.0034395	0.7906	0.00083372	4.0522	0.0042733	1054.547079064711	70.383	0.63716	71.737	71.429	72.066	1.3536					50	19	3	0	0	0	0.069258	2	29490	29490;29540		60.39	6.814	1	5514600			12292	1757	6197	6224	14876;14877	14876					0.01363518491848481
IYPDSFTVL	9	Unmodified	_IYPDSFTVL_					0	0	0		ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7773925662041	2	527.776408	1053.53826	2.9739	0.0015696	-0.37206	-0.00019636	2.6019	0.0013732	527.7763046470343	70.413	0.63716	71.766	71.429	72.066	1.3536					48	19	3	0	0	0	0.1735	2	29528	29528;29584		36.044	15.173	1	3475700			12293	1757	6197	6224	14878;14879	14878					0.01363518491848481
IYPDSFTVL	9	Unmodified	_IYPDSFTVL_					0	0	0		ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.550219714642	1	1054.54554	1053.53826	3.5392	0.0037322	-0.70091	-0.00073914	2.8383	0.0029931	1054.5455490920438	69.897	0.66826	71.735	71.436	72.104	1.8378					36	20	2	0	0	0	0.076627	2	29316	29316;29356		57.471	13.064	1	4724100			12294	1757	6197	6224	14880;14881	14880					0.01363518491848481
IYPDSFTVL	9	Unmodified	_IYPDSFTVL_					0	0	0		ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	ENSG00000111832|ENST00000466444|RWDD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7774536013603	2	527.776408	1053.53826	2.7967	0.001476	-1.2589	-0.00066439	1.5378	0.00081163	527.7760687007182	69.948	0.57286	71.786	71.468	72.041	1.8378					44	17	3	0	0	0	0.3154	2	29317	29317;29357		24.674	6.5275	1	3105800			12295	1757	6197	6224	14882;14883	14882					0.01363518491848481
IYPEAVTMF	9	Unmodified	_IYPEAVTMF_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000112640|Q14738-2|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1070.526782214642	1	1070.5227	1069.51542	2.5816	0.0027636	-0.13244	-0.00014178	2.4491	0.0026218	1070.5240074870267	68.322	0.33705	69.7	69.491	69.828	1.3778					26	10	3	0	0	0	0.24063	2	28679	28633;28679		28.487	11.545	1	2455500			12296	1790	6198	6225	14884;14885	14885					-0.0165582389724932
IYPEAVTMF	9	Unmodified	_IYPEAVTMF_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000112640|Q14738-2|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1070.527392566204	1	1070.5227	1069.51542	2.3743	0.0025417	-0.38713	-0.00041444	1.9872	0.0021273	1070.5223457788902	67.777	0.34002	69.647	69.427	69.767	1.87					18	10	2	0	0	0	0.27148	1	28423	28423		26.884	9.9414	1	1619500			12297	1790	6198	6225	14886	14886					-0.0165582389724932
IYPEPFLI	8	Unmodified	_IYPEPFLI_					0	0	0		nc|ENSG00000163714|O15042-3|U2SURP;nc|ENSG00000163714|O15042-2|U2SURP;ENSG00000163714|ENST00000473835|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	nc|ENSG00000163714|O15042-3|U2SURP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5549194216728	1	991.549896	990.54262	5.3995	0.0053539	-2.742	-0.0027188	2.6575	0.002635	991.5466068602668	82.005	0.40466	83.218	82.975	83.38	1.2125					19	12	2	0	0	0	0.80415	1	34487	34487		20.871	1.6142	1	1425200			12298	7911	6199	6226	14887	14887					0.0469702770543563
IYPEVVHMF	9	Unmodified	_IYPEVVHMF_					0	0	0		nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;RCOR1-PPP2R5C|2|fusion;ENSG00000078304|ENST00000694906|PPP2R5C;RCOR1-PPP2R5C|3|fusion;RCOR1-PPP2R5C|1|fusion;ENST00000553730.5_1_14:102276279-102348623:+|nuORF	nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7878906130791	2	567.786253	1133.55795	2.5479	0.0014466	-0.60162	-0.00034159	1.9462	0.0011051	567.7861967276453	59.918	1.0383	61.337	60.617	61.656	1.4196					77	33	3	0	0	0	0.098957	5	25133	24983;25032;25083;25133;25182		49.669	32.556	1	3583100			12299	976	6200	6227	14888;14889;14890;14891;14892	14891					-0.0034842876902985154
IYPEVVHMF	9	Unmodified	_IYPEVVHMF_					0	0	0		nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;RCOR1-PPP2R5C|2|fusion;ENSG00000078304|ENST00000694906|PPP2R5C;RCOR1-PPP2R5C|3|fusion;RCOR1-PPP2R5C|1|fusion;ENST00000553730.5_1_14:102276279-102348623:+|nuORF	nc|ENSG00000078304|Q13362-2|PPP2R5C	nc|ENSG00000078304|Q13362-2|PPP2R5C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.7880737185478	2	567.786253	1133.55795	2.6826	0.0015231	-0.56309	-0.00031971	2.1195	0.0012034	567.7861308132883	59.431	0.9772	61.4	60.663	61.64	1.969					87	31	3	0	0	0	0.052478	5	24898	24773;24847;24898;24949;25000		67.035	40.767	1	3770200			12300	976	6200	6227	14893;14894;14895;14896;14897	14895					-0.0034842876902985154
IYPHGLVLL	9	Unmodified	_IYPHGLVLL_					0	0	0		ENST00000454078.1_1_6:71318605-71318935:-|nuORF;ENSG00000102172|ENST00000404933|SMS	ENST00000454078.1_1_6:71318605-71318935:-|nuORF	ENST00000454078.1_1_6:71318605-71318935:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.8147460818291	2	512.813128	1023.6117	3.7378	0.0019168	0.17715	9.0847E-05	3.9149	0.0020076	512.8128353481192	60.454	0.43873	62.419	62.26	62.699	1.9653					24	13	2	0	0	0	0.08022	1	25384	25384		56.048	23.931	1	1083300			12301	1383	6201	6228	14898	14898					0.10084111724984268
IYPIGDPPTI	10	Unmodified	_IYPIGDPPTI_					0	0	0			REV__tr|A0A553SLI3|A0A553SLI3_NIACIYdcFfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20725PE=4SV=1	REV__tr|A0A553SLI3|A0A553SLI3_NIACIYdcFfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20725PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7900268435478	2	543.297507	1084.58046	3.2529	0.0017673	-1.0667	-0.00057952	2.1862	0.0011878	543.2982594551357	81.305	0.37209	82.538	82.408	82.78	1.2332					28	11	3	0	0	0	0.79742	1	34109	34109		12.532	1.4171	1	2469800	+		12302	14984	6202	6229	14899	14899					0.04155493900225338
IYPIGDPPTI	10	Unmodified	_IYPIGDPPTI_					0	0	0			REV__tr|A0A553SLI3|A0A553SLI3_NIACIYdcFfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20725PE=4SV=1	REV__tr|A0A553SLI3|A0A553SLI3_NIACIYdcFfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20725PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	543.7900268435478	2	543.297507	1084.58046	3.2529	0.0017673	-1.0667	-0.00057952	2.1862	0.0011878	543.2982594551357	81.305	0.37209	82.538	82.408	82.78	1.2332					28	11	3	0	0	0	0.12475	1	34109	34109		12.532	4.6214	1	2469800	+		12303	14984	6202	6229	14900	14900					0.04155493900225338
IYPMMCHIL	9	Unmodified	_IYPMMCHIL_					0	0	0		ENSG00000001561|ENST00000321037|ENPP4	ENSG00000001561|ENST00000321037|ENPP4	ENSG00000001561|ENST00000321037|ENPP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7720214724541	2	560.771234	1119.52791	2.9984	0.0016814	-1.8774	-0.0010528	1.121	0.00062863	560.7707330586927	62.412	0.54937	64.369	64.091	64.64	1.9571					33	17	2	0	0	0	0.64949	1	26216	26216		9.3474	0.75416	1	1658000			12304	457	6203	6230	14901	14901					-0.02706827030237946
IYPNQKIQV	9	Unmodified	_IYPNQKIQV_					0	0	0		tr|A0A553SIK1|A0A553SIK1_NIACIDUF1906domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14915PE=4SV=1	tr|A0A553SIK1|A0A553SIK1_NIACIDUF1906domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14915PE=4SV=1	tr|A0A553SIK1|A0A553SIK1_NIACIDUF1906domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14915PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.2803832888603	2	551.816399	1101.61824	1.7915	0.00098856	-0.44454	-0.0002453	1.3469	0.00074326	551.8157104518386	42.854	0.2693	44.775	44.601	44.87	1.9211					14	8	2	0	0	0	0.082477	1	17965	17965		25.399	0	1	844730			12305	16206	6204	6231	14902	14902					0.07150004885693306
IYPPINVLPSL	11	Unmodified	_IYPPINVLPSL_					0	0	0		MPHOSPH10-ATP6V1B1|1|fusion;chr2:70963261-70963572|379|12.15|0.48|4.67|+|ENST00000412314|ATP6V1B1,VAX2;ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1	MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3675414919853	2	613.363182	1224.71181	4.9529	0.0030379	3.1791	0.0019499	8.132	0.0049879	613.3650278380271	87.977	0.44581	89.033	88.731	89.176	1.0562					18	13	2	0	0	0	0.18339	1	37058	37058		60.074	32.445	1	1031700			12306	7799	6205	6232	14903	14903					0.10844304268152882
IYPPINVLPSL	11	Unmodified	_IYPPINVLPSL_					0	0	0		MPHOSPH10-ATP6V1B1|1|fusion;chr2:70963261-70963572|379|12.15|0.48|4.67|+|ENST00000412314|ATP6V1B1,VAX2;ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1	MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3670532107353	2	613.363182	1224.71181	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.656	1	89.151	88.651	89.651	1.4953								0	0	0	0.37961	1	36952	36952		47.749	26.212	1				12307	7799	6205	6232	14904	14904					0.10844304268152882
IYPPINVLPSL	11	Unmodified	_IYPPINVLPSL_					0	0	0		MPHOSPH10-ATP6V1B1|1|fusion;chr2:70963261-70963572|379|12.15|0.48|4.67|+|ENST00000412314|ATP6V1B1,VAX2;ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1	MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3674194216728	2	613.363182	1224.71181	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.065	1	89.512	89.012	90.012	1.4467								0	0	0	0.42963	1	37119	37119		43.772	16.144	1				12308	7799	6205	6232	14905	14905					0.10844304268152882
IYPPKLHQF	9	Unmodified	_IYPPKLHQF_					0	0	0		chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|415|28.89|0.48|5.91|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1;chr19:29817541-29821722|311|18.29|0.35|5.72|+|0|CCNE1,CCNE1|1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8251220583916	2	571.821484	1141.62842	0.89368	0.00051102	1.7411	0.0009956	2.6348	0.0015066	571.8221809411383	29.631	0.97103	30.913	30.222	31.193	1.2825					52	31	2	0	0	0	0.28372	4	12387	12336;12387;12436;12491		28.487	15.955	1	1141500			12309	229	6206	6233	14906;14907;14908;14909	14907					0.0632661261092835
IYPPKLHQF	9	Unmodified	_IYPPKLHQF_					0	0	0		chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|415|28.89|0.48|5.91|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1;chr19:29817541-29821722|311|18.29|0.35|5.72|+|0|CCNE1,CCNE1|1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5500671267509	3	381.550082	1141.62842	0.1106	4.2198E-05	0.29759	0.00011355	0.40818	0.00015574	381.55005751222535	29.699	1.2168	30.981	30.1	31.317	1.2825					110	39	4	0	0	0	0.16939	1	12471	12471		36.506	24.266	1	6620500			12310	229	6206	6233	14910	14910					0.0632661261092835
IYPPKLHQF	9	Unmodified	_IYPPKLHQF_					0	0	0		chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|415|28.89|0.48|5.91|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1;chr19:29817541-29821722|311|18.29|0.35|5.72|+|0|CCNE1,CCNE1|1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8210937380791	2	571.821484	1141.62842	0.81406	0.00046549	0.86893	0.00049687	1.683	0.00096237	571.8216061274134	29.026	0.81477	30.825	30.419	31.234	1.7987					45	26	2	0	0	0	0.69306	1	12212	12212		11.64	6.8843	1	859720			12311	229	6206	6233	14911	14911					0.0632661261092835
IYPPKLHQF	9	Unmodified	_IYPPKLHQF_					0	0	0		chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|415|28.89|0.48|5.91|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1;chr19:29817541-29821722|311|18.29|0.35|5.72|+|0|CCNE1,CCNE1|1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	381.550082	1141.62842	0.52132	0.00019891	-0.2677	-0.00010214	0.25362	9.6769E-05	381.5498740648861	29.174	1.3315	30.973	30.055	31.386	1.7987	-0.0042504	-0.00030078	NaN	36.506	108	43	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6128400			12312	229	6206	6233							0.0632661261092835
IYPPLLGALSF	11	Unmodified	_IYPPLLGALSF_					0	0	0		ENST00000380338.8_1_9:20622330-20622507:-|nuORF	ENST00000380338.8_1_9:20622330-20622507:-|nuORF	ENST00000380338.8_1_9:20622330-20622507:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	595.8462402224541	2	595.844625	1189.6747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.602	1	97.829	97.329	98.329	0.22776								0	0	0	1.9185E-16	1	41073	41073		112.59	78.191	1				12313	6224	6207	6234	14912	14912					0.08744632722391543
IYPSIFHVL	9	Unmodified	_IYPSIFHVL_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3154785037041	2	544.810585	1087.60662	1.2855	0.00070035	1.7425	0.00094934	3.028	0.0016497	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.20838	2	29720	29720;29770		32.117	18.609	1	6733700			12314	4431	6208	6235	14913;14914	14913					0.06631807862390815
IYPSKWIARL	10	Unmodified	_IYPSKWIARL_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000569930.1_1_16:2133412-2138608:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2493469119072	3	416.248403	1245.72338	1.7518	0.00072918	1.9229	0.00080041	3.6747	0.0015296	416.2496607838018	45.716	0.40439	47.091	46.93	47.334	1.3751					17	12	2	0	0	0	0.78827	1	19150	19150		13.519	11.926	1	422780			12315	1421	6209	6236	14915	14915					0.11034546082123597
IYPSKWIARL	10	Unmodified	_IYPSKWIARL_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000569930.1_1_16:2133412-2138608:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2503539919853	3	416.248403	1245.72338	1.6494	0.00068657	0.68806	0.0002864	2.3375	0.00097297	416.5825833797264	45.246	0.43932	47.206	46.99	47.429	1.9596					20	13	2	0	0	0	0.82306	1	18899	18899		9.7643	7.5115	1	568640			12316	1421	6209	6236	14916	14916					0.11034546082123597
IYPSNMQTMLL	11	Unmodified	_IYPSNMQTMLL_					0	0	0		ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.8281738162041	2	655.827792	1309.64103	1.6326	0.0010707	-0.12758	-8.367E-05	1.505	0.00098701	655.8271763018972	70.412	0.49274	72.25	72.01	72.503	1.8378					20	15	2	0	0	0	0.54522	1	29530	29530		22.736	7.898	1	749710			12317	1627	6210	6237	14917	14917					-0.00140480103345908
IYPSNMQTMLL	11	Unmodified	_IYPSNMQTMLL_					0	0	0		ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	ENSG00000108256|ENST00000225388|NUFIP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	655.827792	1309.64103	2.5978	0.0017037	-0.7476	-0.0004903	1.8502	0.0012134	655.8280253436684	70.937	0.42841	72.279	72.054	72.482	1.3415	0.014435	-0.00037258	NaN	22.736	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1296700			12318	1627	6210	6237							-0.00140480103345908
IYPTTYVQF	9	Unmodified	_IYPTTYVQF_					0	0	0		ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2909423708916	2	566.289682	1130.56481	2.9189	0.001653	-0.054372	-3.079E-05	2.8645	0.0016222	566.2897531652123	62.139	0.4459	63.557	63.333	63.779	1.4177					35	13	4	0	0	0	0.076627	3	26054	26015;26054;26092		57.471	21.344	1	6273300			12319	4525	6211	6238	14918;14919;14920	14919					0.004752073831923553
IYPTTYVQF	9	Unmodified	_IYPTTYVQF_					0	0	0		ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2910034060478	2	566.289682	1130.56481	2.4461	0.0013852	0.17723	0.00010036	2.6233	0.0014855	566.2898283243084	61.621	0.3828	63.578	63.368	63.751	1.9571					34	11	4	0	0	0	0.076627	2	25857	25808;25857		57.471	9.1255	1	6177100			12320	4525	6211	6238	14921;14922	14922					0.004752073831923553
IYPVKYTQTF	10	Unmodified	_IYPVKYTQTF_					0	0	0		ENSG00000112378|ENST00000421351|PERP	ENSG00000112378|ENST00000421351|PERP	ENSG00000112378|ENST00000421351|PERP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	630.3385497927666	2	630.337164	1258.65977	2.0602	0.0012986	-1.5755	-0.00099311	0.48465	0.0003055	630.3358525440536	39.652	0.2088	40.962	40.846	41.055	1.3102					10	6	2	0	0	0	0.31869	1	16625	16625		38.176	14.155	1	662600			12321	1783	6212	6239	14923	14923					0.04079140854355501
IYPVKYTQTF	10	Unmodified	_IYPVKYTQTF_					0	0	0		ENSG00000112378|ENST00000421351|PERP	ENSG00000112378|ENST00000421351|PERP	ENSG00000112378|ENST00000421351|PERP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	630.3375732302666	2	630.337164	1258.65977	0.98545	0.00062116	0.40327	0.0002542	1.3887	0.00087536	630.3372161320157	39.183	0.28103	41.019	40.848	41.129	1.8366					17	8	3	0	0	0	0.63205	1	16421	16421		21.537	7.6309	1	1013600			12322	1783	6212	6239	14924	14924					0.04079140854355501
IYPWVHVVI	9	Unmodified	_IYPWVHVVI_					0	0	0		ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3	ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3281127810478	2	563.326402	1124.63825	3.0387	0.0017118	-0.40628	-0.00022887	2.6325	0.0014829	563.3253832418952	70.811	0.5029	72.165	71.873	72.376	1.3536					38	15	4	0	0	0	0.16975	1	29695	29695		36.466	15.595	1	4580000			12323	3722	6213	6240	14925	14925					0.0809180061630741
IYPWVHVVI	9	Unmodified	_IYPWVHVVI_					0	0	0		ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3	ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3275634646416	2	563.326402	1124.63825	1.9494	0.0010981	-0.09053	-5.0998E-05	1.8589	0.0010472	563.3254960859541	70.345	0.53205	72.183	71.849	72.381	1.8378					41	16	3	0	0	0	0.11074	1	29472	29472		45.75	19.409	1	4355300			12324	3722	6213	6240	14926	14926					0.0809180061630741
IYQEVWNLF	9	Unmodified	_IYQEVWNLF_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3106567263603	2	606.308406	1210.60226	5.777	0.0035027	-0.31763	-0.00019258	5.4594	0.0033101	606.3080595909837	88.497	0.25746	89.553	89.434	89.691	1.0562					18	7	3	0	0	0	0.32838	1	37328	37328		24.021	9.1823	1	1035700			12325	5341	6214	6241	14927	14927					0.005382986487802555
IYQFIMDRF	9	Oxidation (M)	_IYQFIM(Oxidation (M))DRF_		IYQFIM(1)DRF		IYQFIM(62)DRF	0	0	1		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.8073608279228	2	624.807716	1247.60088	1.4227	0.00088889	0.48333	0.00030199	1.906	0.0011909	624.8080296437817	54.283	1.0349	55.688	55.35	56.385	1.4048					55	33	3	0	0	0	0.066197	2	22690	22690;22742		61.602	25.558	1	3204800			12326	714	6215	6242	14928;14929	14928		7			-0.01301658711622622
IYQFIMDRF	9	Oxidation (M)	_IYQFIM(Oxidation (M))DRF_		IYQFIM(1)DRF		IYQFIM(56)DRF	0	0	1		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8083373904228	2	624.807716	1247.60088	0.67078	0.00041911	-0.16596	-0.00010369	0.50483	0.00031542	624.8079124565842	53.777	0.93922	55.747	55.471	56.41	1.9697					48	29	3	0	0	0	0.081597	2	22543	22497;22543		55.503	25.278	1	2860700			12327	714	6215	6242	14930;14931	14931		7			-0.01301658711622622
IYQFIMDRF	9	Unmodified	_IYQFIMDRF_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8121215701103	2	616.810259	1231.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.286	1	66.685	66.185	67.185	1.3989								0	0	0	0.00087428	1	27380	27380		99.755	61.58	1				12328	714	6215	6243	14932	14932					-0.0005735484899105359
IYQFIMDRF	9	Unmodified	_IYQFIMDRF_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8116943240166	2	616.810259	1231.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.378	1	66.777	66.277	67.277	1.3989								0	0	0	0.00087428	1	27418	27418		99.755	61.58	1				12329	714	6215	6243	14933	14933					-0.0005735484899105359
IYQFIMDRF	9	Unmodified	_IYQFIMDRF_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8113281130791	2	616.810259	1231.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.772	1	66.7	66.2	67.2	1.928								0	0	0	0.0001549	1	27170	27170		110.67	64.975	1				12330	714	6215	6243	14934	14934					-0.0005735484899105359
IYQFIMDRF	9	Unmodified	_IYQFIMDRF_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8113281130791	2	616.810259	1231.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.894	1	66.802	66.302	67.302	1.9085								0	0	0	0.0001549	1	27220	27220		110.67	56.842	1				12331	714	6215	6243	14935	14935					-0.0005735484899105359
IYQFIMDRF	9	Unmodified	_IYQFIMDRF_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2;FOXC2|p.P107H|1|0.8|ENSG00000176692|chr16:86567655-86567655|C/A|missense_variant;FOXL1|p.G120Efs*147|1|0.08|ENSG00000176678|chr16:86579081-86579082|-/AACATTCA|frameshift_variant;FOXL1|p.S121Vfs*151|1|0.07|ENSG00000176678|chr16:86579082-86579083|-/TGTCCCCATCTGGCTCTCTAGGA|frameshift_variant;ENSG00000176678|ENST00000320241|FOXL1	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8109008669853	2	616.810259	1231.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.986	1	66.894	66.394	67.394	1.9085								0	0	0	0.019985	1	27259	27259		89.401	53.357	1				12332	714	6215	6243	14936	14936					-0.0005735484899105359
IYQKKGIHIR	10	Unmodified	_IYQKKGIHIR_					0	0	0			REV__nc|ENSG00000196387|P52738-2|ZNF140	REV__nc|ENSG00000196387|P52738-2|ZNF140	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3849975466728	2	628.385314	1254.75608	2.5225	0.0015851	-2.3616	-0.001484	0.16091	0.00010111	628.3836269646986	79.065	0.49911	80.332	80.224	80.723	1.2668					32	15	3	0	0	0	0.89646	1	33252	33252		1.8442	0	1	1897500	+		12333	11632	6216	6244	14937	14937					0.13888753204969362
IYQKKGIHIR	10	Unmodified	_IYQKKGIHIR_					0	0	0			REV__nc|ENSG00000196387|P52738-2|ZNF140	REV__nc|ENSG00000196387|P52738-2|ZNF140	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3856689333916	2	628.385314	1254.75608	1.6819	0.0010569	-2.6815	-0.001685	-0.99959	-0.00062813	628.3839104524359	78.736	0.52486	80.471	80.289	80.814	1.735					41	16	3	0	0	0	0.89646	1	33038	33038		1.8442	0	1	2272800	+		12334	11632	6216	6244	14938	14938					0.13888753204969362
IYQKNGDPLHI	11	Unmodified	_IYQKNGDPLHI_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2348205447197	3	433.234822	1296.68264	2.2864	0.00099055	-1.5553	-0.0006738	0.73112	0.00031675	433.23406205528755	40.981	6.4739	42.306	41.623	48.097	1.3254					333	206	4	0	0	0	0.95983	1	19088	19088		2.8433	0.75728	1	9219400			12335	678	6217	6245	14939	14939					0.0461615997185163
IYQKQILNL	9	Unmodified	_IYQKQILNL_					0	0	0		ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENST00000475005.1_1_9:5812814-5833063:-|nuORF	ENST00000475005.1_1_9:5812814-5833063:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	566.7994872927666	2	566.839874	1131.66519	2.437	0.0013814	-3.9231	-0.0022238	-1.486	-0.00084235	566.8386861544141	69.492	0.6468	70.858	70.701	71.348	1.3657					31	20	2	0	0	0	0.078322	1	29216	29216		34.102	3.4659	1	1541300			12336	6777	6218	6246	14940	14940					0.10462864436840391
IYQRDPLKL	9	Unmodified	_IYQRDPLKL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.E106Tfs*19|1|0.22|ENSG00000166888|chr12:57107235-57107254|TCCATAACAGCTTTTTTCTC/-|frameshift_variant;STAT6|p.K107Nfs*25|1|0.34|ENSG00000166888|chr12:57107249-57107250|-/G|frameshift_variant	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5615112185478	3	382.560758	1144.66044	0.3305	0.00012644	1.5188	0.00058102	1.8493	0.00070746	382.56140459493867	27.641	1.0719	28.92	28.565	29.637	1.2789					89	34	5	0	0	0	0.034867	5	11623	11498;11545;11585;11623;11665		69.338	38.07	1	41683000			12337	3930	6219	6247	14941;14942;14943;14944;14945	14944					0.0938998029407685
IYQRDPLKL	9	Unmodified	_IYQRDPLKL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.E106Tfs*19|1|0.22|ENSG00000166888|chr12:57107235-57107254|TCCATAACAGCTTTTTTCTC/-|frameshift_variant;STAT6|p.K107Nfs*25|1|0.34|ENSG00000166888|chr12:57107249-57107250|-/G|frameshift_variant	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3378784060478	2	573.337498	1144.66044	1.0613	0.00060851	0.8013	0.00045941	1.8626	0.0010679	573.3376905297348	27.638	0.46414	28.917	28.657	29.122	1.2789					39	14	3	0	0	0	0.034867	2	11550	11550;11602		80.676	38.836	1	4067000			12338	3930	6219	6247	14946;14947	14946					0.0938998029407685
IYQRDPLKL	9	Unmodified	_IYQRDPLKL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.E106Tfs*19|1|0.22|ENSG00000166888|chr12:57107235-57107254|TCCATAACAGCTTTTTTCTC/-|frameshift_variant;STAT6|p.K107Nfs*25|1|0.34|ENSG00000166888|chr12:57107249-57107250|-/G|frameshift_variant	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.5614196658134	3	382.560758	1144.66044	0.44902	0.00017178	1.3147	0.00050295	1.7637	0.00067473	382.56136107009127	27.073	0.89448	28.82	28.495	29.39	1.747					89	28	5	0	0	0	0.036104	5	11344	11248;11293;11344;11395;11435		81.915	50.279	1	47119000			12339	3930	6219	6247	14948;14949;14950;14951;14952	14950					0.0938998029407685
IYQRDPLKL	9	Unmodified	_IYQRDPLKL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF;STAT6|p.E106Tfs*19|1|0.22|ENSG00000166888|chr12:57107235-57107254|TCCATAACAGCTTTTTTCTC/-|frameshift_variant;STAT6|p.K107Nfs*25|1|0.34|ENSG00000166888|chr12:57107249-57107250|-/G|frameshift_variant	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.3383056521416	2	573.337498	1144.66044	0.73665	0.00042235	1.2154	0.00069686	1.9521	0.0011192	573.3381827416665	27.103	0.4941	28.85	28.556	29.05	1.747					38	15	3	0	0	0	0.028318	3	11333	11285;11333;11384		90.135	44.395	1	4468800			12340	3930	6219	6247	14953;14954;14955	14954					0.0938998029407685
IYQSQQDVTWH	11	Unmodified	_IYQSQQDVTWH_					0	0	0			REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.8913757205009	3	468.889603	1403.64698	0.99252	0.00046538	1.8334	0.00085967	2.8259	0.0013251	468.8903046543887	14.368	0.34469	14.481	14.229	14.574	0.11295					22	10	4	0	0	0	1.0156	1	5950	5950		2.8433	0.4085	1	1884300	+		12341	10963	6220	6248	14956	14956					-0.03869922275794124
IYQTWLKNL	9	Unmodified	_IYQTWLKNL_					0	0	0		ENST00000507606.2_1_7:135347283-135358947:+|nuORF	ENST00000507606.2_1_7:135347283-135358947:+|nuORF	ENST00000507606.2_1_7:135347283-135358947:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.8344604372978	2	589.832049	1177.64954	1.7409	0.0010268	-0.69389	-0.00040928	1.047	0.00061754	589.8315185613527	57.031	0.3932	58.446	58.214	58.607	1.4145					34	12	4	0	0	0	9.5669E-06	2	23870	23870;23922		181.69	106.76	1	9352200			12342	7009	6221	6249	14957;14958	14957					0.06782577919807409
IYQTWLKNL	9	Unmodified	_IYQTWLKNL_					0	0	0		ENST00000507606.2_1_7:135347283-135358947:+|nuORF	ENST00000507606.2_1_7:135347283-135358947:+|nuORF	ENST00000507606.2_1_7:135347283-135358947:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8331786990166	2	589.832049	1177.64954	1.0195	0.00060135	-0.0074014	-4.3656E-06	1.0121	0.00059699	589.8323412287964	56.458	0.42153	58.426	58.21	58.631	1.9684					29	13	3	0	0	0	2.4408E-05	2	23689	23643;23689		168.54	90.388	1	4864600			12343	7009	6221	6249	14959;14960	14960					0.06782577919807409
IYQTWTEW	8	Unmodified	_IYQTWTEW_					0	0	0			REV__ENSG00000158486|ENST00000698260|DNAH3	REV__ENSG00000158486|ENST00000698260|DNAH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7661010622978	2	563.763832	1125.51311	2.6394	0.001488	1.4818	0.00083537	4.1211	0.0023233	563.7643834723469	76.805	0.40628	78.099	77.887	78.294	1.2938					31	12	3	0	0	0	0.87803	2	32259	32211;32259		10.183	0.10947	1	2282700	+		12344	10556	6222	6250	14961;14962	14962					-0.044625363107115845
IYQYIQSRF	9	Unmodified	_IYQYIQSRF_					0	0	0		DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant;nc|ENSG00000157540|Q13627-4|DYRK1A;nc|ENSG00000157540|Q13627-3|DYRK1A;nc|ENSG00000157540|Q13627-5|DYRK1A;nc|ENSG00000105204|Q9Y463-2|DYRK1B;nc|ENSG00000105204|Q9Y463-3|DYRK1B;ENSG00000105204|ENST00000323039|DYRK1B;ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A	DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant	DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3225585818291	2	609.319306	1216.62406	2.2609	0.0013776	2.1661	0.0013198	4.4269	0.0026974	609.3197249109955	40.339	0.21059	41.649	41.514	41.725	1.3102					10	6	2	0	0	0	0.066197	1	16915	16915		61.602	21.652	1	1531900			12345	435	6223	6251	14963	14963					0.024411033973592566
IYQYIQSRF	9	Unmodified	_IYQYIQSRF_					0	0	0		DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant;nc|ENSG00000157540|Q13627-4|DYRK1A;nc|ENSG00000157540|Q13627-3|DYRK1A;nc|ENSG00000157540|Q13627-5|DYRK1A;nc|ENSG00000105204|Q9Y463-2|DYRK1B;nc|ENSG00000105204|Q9Y463-3|DYRK1B;ENSG00000105204|ENST00000323039|DYRK1B;ENSG00000157540|ENST00000647188|DYRK1A;nc|ENSG00000157540|Q13627|DYRK1A	DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant	DYRK1B|p.S314Pfs*10|1|0.04|ENSG00000105204|chr19:39827524-39827525|-/GG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3225585818291	2	609.319306	1216.62406	1.8361	0.0011188	1.3461	0.00082018	3.1821	0.0019389	609.3208772385409	39.942	0.27825	41.805	41.677	41.956	1.8624					21	8	3	0	0	0	0.12216	2	16733	16733;16790		41.956	14.327	1	1165000			12346	435	6223	6251	14964;14965	14964					0.024411033973592566
IYRHGQIRV	9	Unmodified	_IYRHGQIRV_					0	0	0		ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.3380615115166	2	571.333082	1140.65161	1.9694	0.0011252	2.3292	0.0013307	4.2986	0.0024559	571.3347102830645	71.525	0.3791	73.349	73.191	73.57	1.824					19	11	2	0	0	0	0.66839	1	30039	30039		8.5933	0.68312	1	926780			12347	2388	6224	6252	14966	14966					0.08691051448272447
IYRHGQIRV	9	Unmodified	_IYRHGQIRV_					0	0	0		ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	571.333082	1140.65161	1.5541	0.00088793	2.9393	0.0016793	4.4934	0.0025673	571.3348434917136	73.636	0.30243	73.636	73.462	73.764	0	0.17748	0.00055223	NaN	8.5933	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	599930			12348	2388	6224	6252							0.08691051448272447
IYRTKLAKVC	10	Unmodified	_IYRTKLAKVC_					0	0	0			REV__ENST00000463488.1_1_9:133569202-133574940:+|nuORF	REV__ENST00000463488.1_1_9:133569202-133574940:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8574706912041	2	597.855001	1193.69545	2.7426	0.0016397	1.9742	0.0011803	4.7168	0.00282	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.846	1	31850	31850		7.2892	2.5332	1	9838100	+		12349	9793	6225	6253	14967	14967					0.10634899830392897
IYRWFNISF	9	Unmodified	_IYRWFNISF_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.3260375857353	2	623.324391	1244.63423	2.345	0.0014617	0.80041	0.00049892	3.1455	0.0019606	623.3249764943217	80.167	0.52749	81.418	81.171	81.698	1.2512					47	16	4	0	0	0	0.0058174	3	33635	33588;33635;33689		118.89	61.423	1	11520000			12350	3940	6226	6254	14968;14969;14970	14969					0.021697111225876142
IYRWFNISF	9	Unmodified	_IYRWFNISF_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.3254882693291	2	623.324391	1244.63423	1.0207	0.00063623	0.77984	0.00048609	1.8005	0.0011223	623.325064807929	79.616	0.65106	81.332	81.075	81.726	1.7167					56	20	5	0	0	0	0.0058174	3	33383	33336;33383;33426		118.89	60.216	1	10094000			12351	3940	6226	6254	14971;14972;14973	14972					0.021697111225876142
IYSDDLGVTW	10	Unmodified	_IYSDDLGVTW_					0	0	0		nc|ENSG00000162139|Q9UQ49|NEU3;ENSG00000162139|ENST00000294064|NEU3	nc|ENSG00000162139|Q9UQ49|NEU3	nc|ENSG00000162139|Q9UQ49|NEU3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.7805663943291	2	584.779679	1167.5448	2.6732	0.0015632	-0.95863	-0.00056059	1.7146	0.0010026	584.7791133063331	64.109	0.28173	66.037	65.857	66.139	1.928					17	8	3	0	0	0	0.80568	1	26901	26901		11.64	4.3511	1	1095100			12352	3608	6227	6255	14974	14974					-0.0322658834743379
IYSDDLGVTW	10	Unmodified	_IYSDDLGVTW_					0	0	0		nc|ENSG00000162139|Q9UQ49|NEU3;ENSG00000162139|ENST00000294064|NEU3	nc|ENSG00000162139|Q9UQ49|NEU3	nc|ENSG00000162139|Q9UQ49|NEU3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	584.779679	1167.5448	3.1182	0.0018234	-1.3677	-0.00079982	1.7504	0.0010236	584.7793182989651	64.562	0.27808	65.97	65.801	66.079	1.4071	-0.033688	-0.00018088	NaN	11.64	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1064800			12353	3608	6227	6255							-0.0322658834743379
IYSELITAGAH	11	Unmodified	_IYSELITAGAH_					0	0	0		tr|A0A553SHG2|A0A553SHG2_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_12860PE=4SV=1	tr|A0A553SHG2|A0A553SHG2_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_12860PE=4SV=1	tr|A0A553SHG2|A0A553SHG2_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_12860PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8135253787041	2	587.808771	1173.60299	4.2032	0.0024707	2.0323	0.0011946	6.2355	0.0036653	587.8100399851184	93.592	0.286	94.464	94.29	94.576	0.87176					18	8	3	0	0	0	0.70499	1	39372	39372		18.146	3.3081	1	1563800			12354	16150	6228	6256	14975	14975					0.023130932978574492
IYSIDFTRF	9	Unmodified	_IYSIDFTRF_					0	0	0		ENSG00000175970|ENST00000344651|UNC119B;UNC119B|p.D133Ffs*42|1|0.12|ENSG00000175970|chr12:120716664-120716665|-/TTTCA|frameshift_variant	ENSG00000175970|ENST00000344651|UNC119B	ENSG00000175970|ENST00000344651|UNC119B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3014404177666	2	581.300581	1160.58661	2.8082	0.0016324	-0.40501	-0.00023543	2.4032	0.001397	581.3003613340737	64.255	0.46391	65.662	65.401	65.865	1.4071					48	14	4	0	0	0	0.015029	2	26892	26892;26937		103.35	46.632	1	22629000			12355	4391	6229	6257	14976;14977	14976					0.012740121317847297
IYSIDFTRF	9	Unmodified	_IYSIDFTRF_					0	0	0		ENSG00000175970|ENST00000344651|UNC119B;UNC119B|p.D133Ffs*42|1|0.12|ENSG00000175970|chr12:120716664-120716665|-/TTTCA|frameshift_variant	ENSG00000175970|ENST00000344651|UNC119B	ENSG00000175970|ENST00000344651|UNC119B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3016845583916	2	581.300581	1160.58661	2.8063	0.0016313	-0.41253	-0.0002398	2.3937	0.0013915	581.3002731824827	63.719	0.46431	65.647	65.393	65.857	1.928					49	14	4	0	0	0	0.0069529	3	26765	26682;26726;26765		114.65	53.292	1	18401000			12356	4391	6229	6257	14978;14979;14980	14980					0.012740121317847297
IYSKGNEVIL	10	Unmodified	_IYSKGNEVIL_					0	0	0			REV__tr|A0A553SFC3|A0A553SFC3_NIACISortaseBprotein-sortingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08635PE=4SV=1	REV__tr|A0A553SFC3|A0A553SFC3_NIACISortaseBprotein-sortingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08635PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	568.2086669802666	2	568.321514	1134.62847	1.8947	0.0010768	-2.061	-0.0011713	-0.16628	-9.4503E-05	568.3204439902117	58.55	0.23154	60.519	60.401	60.633	1.969					11	7	2	0	0	0	0.12384	1	24549	24549		24.021	1.3625	1	1929600	+		12357	14702	6230	6258	14981	14981					0.06654567820282864
IYSKVKYRRYY	11	Unmodified	_IYSKVKYRRYY_					0	0	0			REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.2966186404228	3	513.620788	1537.84053	2.2057	0.0011329	0.6552	0.00033652	2.8609	0.0014694	513.9547403094813	41.48	0.3634	43.373	43.209	43.573	1.8927					33	11	4	0	0	0	0.14606	1	17359	17359		3.8459	3.4376	1	6988800	+		12358	11188	6231	6259	14982	14982					0.09312659231090947
IYSKVKYRRYY	11	Unmodified	_IYSKVKYRRYY_					0	0	0			REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	513.620788	1537.84053	1.9339	0.00099331	0.77499	0.00039805	2.7089	0.0013914	513.6211493621952	43.208	0.45044	43.532	43.321	43.771	0.32389	-0.011228	-0.00014365	NaN	3.8459	45	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8500700	+		12359	11188	6231	6259							0.09312659231090947
IYSKVKYRRYY	11	Unmodified	_IYSKVKYRRYY_					0	0	0			REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	REV__ENST00000585094.1_1_17:30986131-31048108:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	513.620788	1537.84053	2.2785	0.0011703	2.0507	0.0010533	4.3293	0.0022236	513.6210426088838	42.007	0.4287	43.347	43.11	43.539	1.3399	-0.19627	0.0018221	NaN	3.8459	45	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5858400	+		12360	11188	6231	6259							0.09312659231090947
IYSPNDQND	9	Unmodified	_IYSPNDQND_					0	0	0			REV__ENSG00000115942|ENST00000234296|ORC2	REV__ENSG00000115942|ENST00000234296|ORC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.7964965701103	2	533.22781	1064.44107	3.4748	0.0018528	-2.565	-0.0013678	0.90971	0.00048508	533.2262374278508	81.439	0.46417	82.672	82.502	82.966	1.2332					22	14	2	0	0	0	0.11463	1	34284	34284		7.9102	0	1	693840	+		12361	9462	6232	6260	14983	14983					-0.08857495455094977
IYSTTLWHL	9	Unmodified	_IYSTTLWHL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3063232302666	2	567.303124	1132.5917	3.0189	0.0017126	2.5567	0.0014504	5.5756	0.003163	567.3042780508811	59.84	0.36855	61.809	61.612	61.981	1.969					25	11	3	0	0	0	0.076627	2	25136	25084;25136		57.471	26.835	1	2217300			12362	476	6233	6261	14984;14985	14985					0.030703159943641367
IYSTTLWHL	9	Unmodified	_IYSTTLWHL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	567.303124	1132.5917	3.0239	0.0017155	4.6656	0.0026468	7.6895	0.0043623	567.3042007914333	60.411	0.52407	61.831	61.597	62.121	1.4196	0.010682	0.0020009	NaN	57.471	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3141000			12363	476	6233	6261							0.030703159943641367
IYTAELWLL	9	Unmodified	_IYTAELWLL_					0	0	0			REV__tr|A0A553ST43|A0A553ST43_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_04320PE=4SV=1	REV__tr|A0A553ST43|A0A553ST43_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_04320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3162719607353	2	561.3157	1120.61685	1.9398	0.0010888	-1.4952	-0.00083925	0.44466	0.00024959	561.3148967426628	41.199	0.36758	43.091	42.928	43.295	1.8927					17	11	2	0	0	0	0.37357	1	17318	17318		21.747	1.293	1	1637700	+		12364	15227	6234	6262	14986	14986					0.06136370796957635
IYTDMGRFTI	10	Unmodified	_IYTDMGRFTI_					0	0	0		ENSG00000105402|ENST00000263354|NAPA;ENST00000602082.5_1_19:47996374-48018112:-|nuORF;ENST00000596892.5_1_19:47996374-48000675:-|nuORF;ENST00000602174.5_1_19:47996374-48018112:-|nuORF;ENST00000601927.1_1_19:47996374-47999001:-|nuORF;ENST00000594288.5_1_19:47996374-48015977:-|nuORF;ENST00000597778.5_1_19:47996282-47999001:-|nuORF;nc|ENSG00000125814|Q9H115-2|NAPB;ENSG00000125814|ENST00000377026|NAPB	ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8035766482353	2	608.805174	1215.59579	1.6255	0.0009896	-1.3727	-0.0008357	0.25279	0.0001539	608.8027933765529	54.556	0.28745	55.961	55.803	56.09	1.4048					12	8	2	0	0	0	0.21017	1	22861	22861		47.732	15.426	1	3858600			12365	1515	6235	6263	14987	14987					-0.003379625741899872
IYTDMGRFTI	10	Unmodified	_IYTDMGRFTI_					0	0	0		ENSG00000105402|ENST00000263354|NAPA;ENST00000602082.5_1_19:47996374-48018112:-|nuORF;ENST00000596892.5_1_19:47996374-48000675:-|nuORF;ENST00000602174.5_1_19:47996374-48018112:-|nuORF;ENST00000601927.1_1_19:47996374-47999001:-|nuORF;ENST00000594288.5_1_19:47996374-48015977:-|nuORF;ENST00000597778.5_1_19:47996282-47999001:-|nuORF;nc|ENSG00000125814|Q9H115-2|NAPB;ENSG00000125814|ENST00000377026|NAPB	ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8044311404228	2	608.805174	1215.59579	1.6662	0.0010144	-1.6974	-0.0010334	-0.031235	-1.9016E-05	608.8029985268977	54.115	0.31527	56.083	55.877	56.192	1.9684					15	9	2	0	0	0	0.13876	1	22664	22664		57.108	24.802	1	3160600			12366	1515	6235	6263	14988	14988					-0.003379625741899872
IYTEVRELV	9	Unmodified	_IYTEVRELV_					0	0	0		ENSG00000136026|ENST00000378026|CKAP4	ENSG00000136026|ENST00000378026|CKAP4	ENSG00000136026|ENST00000378026|CKAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3154174685478	2	561.313689	1120.61282	2.199	0.0012343	1.2352	0.00069332	3.4342	0.0019277	561.3141928151927	41.653	0.37793	42.978	42.779	43.157	1.3254					19	11	2	0	0	0	0.11669	2	17448	17448;17502		43.772	15.286	1	1592800			12367	2702	6236	6264	14989;14990	14989					0.05734281303239186
IYTEVRELV	9	Unmodified	_IYTEVRELV_					0	0	0		ENSG00000136026|ENST00000378026|CKAP4	ENSG00000136026|ENST00000378026|CKAP4	ENSG00000136026|ENST00000378026|CKAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3172485232353	2	561.313689	1120.61282	1.9398	0.0010888	2.0882	0.0011721	4.028	0.002261	561.3148967426628	41.199	0.36758	43.091	42.928	43.295	1.8927					17	11	2	0	0	0	0.11669	1	17265	17265		43.772	9.67	1	1637700			12368	2702	6236	6264	14991	14991					0.05734281303239186
IYTHAWSF	8	Unmodified	_IYTHAWSF_					0	0	0			REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	512.2819702029228	2	512.747985	1023.48142	2.2381	0.0011476	0.9725	0.00049865	3.2106	0.0016462	512.7479282431854	69.132	0.61017	70.498	70.091	70.701	1.3657					54	19	5	0	0	0	2.3239	1	28936	28936		15.768	1.1865	1	12384000	+		12369	10664	6237	6265	14992	14992					-0.029384842740114436
IYTHAWSF	8	Unmodified	_IYTHAWSF_					0	0	0			REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	REV__nc|ENSG00000162777|Q9H6A0-2|DENND2D	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	512.2820922732353	2	512.747985	1023.48142	2.0888	0.001071	-0.32309	-0.00016567	1.7657	0.00090535	512.7476467370267	68.603	0.49764	70.456	70.12	70.617	1.853					45	15	5	0	0	0	2.3239	1	28672	28672		15.768	2.2603	1	10813000	+		12370	10664	6237	6265	14993	14993					-0.029384842740114436
IYTLNLNEL	9	Unmodified	_IYTLNLNEL_					0	0	0		MAP4K5-TIA1|1|fusion;ENST00000554990.5_1_14:50886739-50915587:-|nuORF;ENSG00000012983|ENST00000682126|MAP4K5;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;ENSG00000011566|ENST00000263881|MAP4K3	MAP4K5-TIA1|1|fusion	MAP4K5-TIA1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8011962771416	2	546.800414	1091.58628	3.0331	0.0016585	-0.086913	-4.7524E-05	2.9461	0.001611	546.8000723409809	72.7	0.34344	74.03	73.852	74.195	1.3297					23	10	3	0	0	0	0.033794	1	30514	30514		81.613	19.04	1	2433800			12371	7790	6238	6266	14994	14994					0.04414592411899321
IYTLNLNEL	9	Unmodified	_IYTLNLNEL_					0	0	0		MAP4K5-TIA1|1|fusion;ENST00000554990.5_1_14:50886739-50915587:-|nuORF;ENSG00000012983|ENST00000682126|MAP4K5;nc|ENSG00000011566|Q8IVH8-3|MAP4K3;nc|ENSG00000011566|Q8IVH8-2|MAP4K3;ENSG00000011566|ENST00000263881|MAP4K3	MAP4K5-TIA1|1|fusion	MAP4K5-TIA1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8015014529228	2	546.800414	1091.58628	2.696	0.0014742	-0.23147	-0.00012657	2.4646	0.0013476	546.7997880241566	72.216	0.33723	74.026	73.861	74.198	1.8101					24	10	3	0	0	0	0.10294	1	30338	30338		48.346	10.372	1	3267600			12372	7790	6238	6266	14995	14995					0.04414592411899321
IYTRLLPAL	9	Unmodified	_IYTRLLPAL_					0	0	0		nc|ENSG00000243989|Q03154-2|ACY1;nc|ENSG00000243989|Q03154-3|ACY1;nc|ENSG00000243989|Q03154-4|ACY1;ENSG00000243989|ENST00000636358|ACY1	nc|ENSG00000243989|Q03154-2|ACY1	nc|ENSG00000243989|Q03154-2|ACY1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3337890505791	2	530.331685	1058.64882	3.2144	0.0017047	-0.46107	-0.00024452	2.7534	0.0014602	530.3311882106195	60.663	0.53072	62.082	61.718	62.249	1.4196					38	16	3	0	0	0	0.081597	2	25450	25399;25450		55.503	22.717	1	1668300			12373	5359	6239	6267	14996;14997	14997					0.12183783270734239
IYTRLLPAL	9	Unmodified	_IYTRLLPAL_					0	0	0		nc|ENSG00000243989|Q03154-2|ACY1;nc|ENSG00000243989|Q03154-3|ACY1;nc|ENSG00000243989|Q03154-4|ACY1;ENSG00000243989|ENST00000636358|ACY1	nc|ENSG00000243989|Q03154-2|ACY1	nc|ENSG00000243989|Q03154-2|ACY1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3317138552666	2	530.331685	1058.64882	3.3296	0.0017658	-0.22451	-0.00011906	3.1051	0.0016467	530.3312252983458	60.096	0.43801	62.061	61.822	62.26	1.9653					28	13	3	0	0	0	0.075994	1	25203	25203		57.722	21.678	1	1957200			12374	5359	6239	6267	14998	14998					0.12183783270734239
IYTSSVNRL	9	Unmodified	_IYTSSVNRL_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7916137576103	2	526.790381	1051.56621	1.2932	0.00068125	0.65943	0.00034738	1.9526	0.0010286	526.7908475493948	23.335	0.24509	24.549	24.412	24.657	1.2145					18	7	3	0	0	0	0.16939	1	9737	9737		36.506	7.4246	1	1397000			12375	367	6240	6268	14999	14999					0.04248841471940068
IYTSSVNRL	9	Unmodified	_IYTSSVNRL_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7910034060478	2	526.790381	1051.56621	0.61836	0.00032575	0.65898	0.00034714	1.2773	0.00067289	526.7909158951434	22.958	0.2797	24.609	24.436	24.716	1.6511					15	8	3	0	0	0	0.24056	1	9577	9577		28.495	5.7582	1	1205100			12376	367	6240	6268	15000	15000					0.04248841471940068
IYTSYLIL	8	Unmodified	_IYTSYLIL_					0	0	0		tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2849304080009	2	493.283869	984.553185	3.9877	0.0019671	-1.0319	-0.00050902	2.9558	0.001458	493.2835854953811	95.752	0.36935	96.174	95.975	96.344	0.4212					23	11	3	0	0	0	0.80415	1	40265	40265		20.871	0.41758	1	4427900			12377	17086	6241	6269	15001	15001					0.060290103598504174
IYTSYLIL	8	Unmodified	_IYTSYLIL_					0	0	0		tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	tr|A0A7D6ZHI0|A0A7D6ZHI0_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2838012576103	2	493.283869	984.553185	3.3513	0.0016531	-2.3204	-0.0011446	1.0308	0.00050849	493.28262896714136	95.489	0.37402	95.891	95.681	96.055	0.40208					29	13	3	0	0	0	0.80415	1	40122	40122		20.871	0.41758	1	3296100			12378	17086	6241	6269	15002	15002					0.060290103598504174
IYTVLFERL	9	Unmodified	_IYTVLFERL_					0	0	0		nc|ENSG00000108528|Q02978-2|SLC25A11;ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF	nc|ENSG00000108528|Q02978-2|SLC25A11	nc|ENSG00000108528|Q02978-2|SLC25A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3359863162041	2	577.334424	1152.6543	1.7051	0.00098441	1.2578	0.00072616	2.9629	0.0017106	577.3352388199273	66.83	0.3489	68.219	68.027	68.376	1.3888					24	10	3	0	0	0	0.11606	1	28024	28024		43.982	5.8307	1	1395100			12379	1638	6242	6270	15003	15003					0.08407462062541526
IYTVLFERL	9	Unmodified	_IYTVLFERL_					0	0	0		nc|ENSG00000108528|Q02978-2|SLC25A11;ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF	nc|ENSG00000108528|Q02978-2|SLC25A11	nc|ENSG00000108528|Q02978-2|SLC25A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3366577029228	2	577.334424	1152.6543	1.6779	0.00096873	1.4787	0.00085369	3.1566	0.0018224	577.3347053945441	66.324	0.31666	68.213	68.057	68.373	1.8889					20	9	3	0	0	0	0.050451	1	27827	27827		67.838	18.284	1	1338900			12380	1638	6242	6270	15004	15004					0.08407462062541526
IYVHDLLTF	9	Unmodified	_IYVHDLLTF_					0	0	0		VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant;ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39;ENST00000570062.1_1_15:42476637-42483338:-|nuORF	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8074218630791	2	560.8055	1119.59645	1.8578	0.0010419	0.23181	0.00013	2.0896	0.0011719	560.8055289525854	67.135	0.86118	68.524	68.215	69.076	1.3888					88	27	5	0	0	0	0.033521	4	28087	28087;28134;28186;28242		81.864	27.09	1	74453000			12381	3929	6243	6271	15005;15006;15007;15008	15005					0.04143200137127678
IYVHDLLTF	9	Unmodified	_IYVHDLLTF_					0	0	0		VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant;ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39;ENST00000570062.1_1_15:42476637-42483338:-|nuORF	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8063232302666	2	560.8055	1119.59645	1.4897	0.00083542	0.1732	9.7132E-05	1.6629	0.00093255	560.805505122183	66.622	0.67778	68.511	68.214	68.892	1.8889					75	21	5	0	0	0	0.028763	4	27974	27877;27923;27974;28014		89.427	38.572	1	86438000			12382	3929	6243	6271	15009;15010;15011;15012	15011					0.04143200137127678
IYVIDAQDDY	10	Unmodified	_IYVIDAQDDY_					0	0	0		ENSG00000116954|ENST00000373001|RRAGC	ENSG00000116954|ENST00000373001|RRAGC	ENSG00000116954|ENST00000373001|RRAGC	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5248596072197	3	405.524038	1213.55028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.436	1	32.436	31.936	32.936	0								0	0	0	0.66222	1	13589	13589		0.69767	0	1				12383	1992	6244	6272	15013	15013					-0.04794909555607774
IYVIIKALVT	10	Unmodified	_IYVIIKALVT_					0	0	0		nc|ENSG00000112038|P35372-15|OPRM1;nc|ENSG00000112038|P35372-12|OPRM1;nc|ENSG00000112038|P35372-14|OPRM1;nc|ENSG00000112038|P35372-13|OPRM1;nc|ENSG00000112038|P35372-11|OPRM1;nc|ENSG00000112038|P35372-2|OPRM1;nc|ENSG00000112038|P35372-8|OPRM1;ENSG00000112038|ENST00000330432|OPRM1;nc|ENSG00000112038|P35372-6|OPRM1;nc|ENSG00000112038|P35372-4|OPRM1;nc|ENSG00000112038|P35372-7|OPRM1;nc|ENSG00000112038|P35372-5|OPRM1;nc|ENSG00000112038|P35372-9|OPRM1;nc|ENSG00000112038|P35372-3|OPRM1;nc|ENSG00000112038|P35372-10|OPRM1	nc|ENSG00000112038|P35372-15|OPRM1	nc|ENSG00000112038|P35372-15|OPRM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2511169314384	3	378.249521	1131.72673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.56	1	101.75	101.25	102.25	0.19076								0	0	0	0.66222	1	42702	42702		0.69767	0	1				12384	1765	6245	6273	15014	15014					0.16613796136130077
IYVIKLAWKWR	11	Unmodified	_IYVIKLAWKWR_					0	0	0			REV__ENST00000489656.5_1_10:70917876-70917945:+|nuORF	REV__ENST00000489656.5_1_10:70917876-70917945:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.6359435915947	3	492.634368	1474.88128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.848	1	89.302	88.802	89.802	1.4539								0	0	0	0.63775	1	37031	37031		0.094841	0	1		+		12385	13416	6246	6274	15015	15015					0.1628304534133349
IYVISAETF	9	Unmodified	_IYVISAETF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1042.548632800579	1	1042.54554	1041.53826	1.89	0.0019705	3.8197	0.0039822	5.7097	0.0059526	1042.5484171950363	63.86	0.28909	65.267	65.112	65.401	1.4071					20	8	3	0	0	0	0.10722	1	26776	26776		46.921	12.818	1	1516900			12386	1969	6247	6275	15016	15016					0.019155184918417945
IYVISAETF	9	Unmodified	_IYVISAETF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1042.546191394329	1	1042.54554	1041.53826	3.5563	0.0037077	1.3487	0.0014061	4.905	0.0051137	1042.5455979755013	63.319	0.31883	65.263	65.091	65.409	1.9444					20	9	3	0	0	0	0.046276	1	26567	26567		70.716	26.309	1	1317500			12387	1969	6247	6275	15017	15017					0.019155184918417945
IYVLHENGTL	10	Unmodified	_IYVLHENGTL_					0	0	0		nc|ENSG00000091129|Q92823-2|NRCAM;ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM;nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-4|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3099243044853	2	579.811313	1157.60807	1.7139	0.00099377	-0.76841	-0.00044554	0.94553	0.00054823	580.3118144194012	65.888	0.42204	67.797	67.529	67.951	1.9085					28	13	3	0	0	0	0.846	1	27673	27673		7.2892	0	1	1026900			12388	1147	6248	6276	15018	15018					0.035573971604890176
IYVPVSLGF	9	Unmodified	_IYVPVSLGF_					0	0	0		ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5659057497978	1	994.560795	993.553519	3.82	0.0037992	3.3308	0.0033127	7.1508	0.0071119	994.5648285614266	83.089	0.24595	84.277	84.142	84.388	1.1879					12	7	2	0	0	0	0.061246	1	34861	34861		63.563	19.156	1	1475900			12389	4253	6249	6277	15019	15019					0.05648430079725131
IYVPVSLGF	9	Unmodified	_IYVPVSLGF_					0	0	0		ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5663329958916	1	994.560795	993.553519	3.3059	0.0032879	2.5428	0.0025289	5.8486	0.0058168	994.5636992058963	82.599	0.2129	84.269	84.173	84.386	1.67					9	6	2	0	0	0	0.15478	1	34665	34665		38.151	15.003	1	1330000			12390	4253	6249	6277	15020	15020					0.05648430079725131
IYVPVSLGF	9	Unmodified	_IYVPVSLGF_					0	0	0		ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	ENSG00000172818|ENST00000335987|OVOL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7847167849541	2	497.784036	993.553519	2.6659	0.0013271	-0.26115	-0.00013	2.4048	0.0011971	497.7836229690043	82.672	0.27273	84.342	84.113	84.386	1.67					12	8	2	0	0	0	0.51832	1	34689	34689		14.582	1.0738	1	1714100			12391	4253	6249	6277	15021	15021					0.05648430079725131
IYVQVTDFL	9	Unmodified	_IYVQVTDFL_					0	0	0			REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2983886599541	2	549.297507	1096.58046	3.0407	0.0016702	-1.0716	-0.00058864	1.969	0.0010816	549.2959959187657	74.505	0.50848	75.823	75.5	76.008	1.318					44	16	4	0	0	0	0.1735	1	31255	31255		36.044	0	1	5879300	+		12392	13337	6250	6278	15022	15022					0.03603493900232024
IYVQVTDFL	9	Unmodified	_IYVQVTDFL_					0	0	0			REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2979614138603	2	549.297507	1096.58046	2.9646	0.0016284	-0.94561	-0.00051942	2.019	0.001109	549.2965635019664	74.026	0.39408	75.823	75.627	76.021	1.7962					39	12	4	0	0	0	0.1735	1	31049	31049		36.044	0	1	4304900	+		12393	13337	6250	6278	15023	15023					0.03603493900232024
IYVQVTDFL	9	Unmodified	_IYVQVTDFL_					0	0	0			REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	549.297507	1096.58046	1.502	0.00082502	-1.864	-0.0010239	-0.36202	-0.00019886	549.2960802408691	76.008	0.28049	76.008	75.884	76.164	0	0.12918	-0.00049614	NaN	36.044	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	915380	+		12394	13337	6250	6278							0.03603493900232024
IYVQVTDFL	9	Unmodified	_IYVQVTDFL_					0	0	0			REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.297507	1096.58046	2.4089	0.0013232	-2.0732	-0.0011388	0.33574	0.00018442	549.2956464525193	75.539	0.30838	75.861	75.71	76.019	0.32163	-0.017644	-0.00072596	NaN	36.044	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1071200	+		12395	13337	6250	6278							0.03603493900232024
IYVSSWAVQV	10	Unmodified	_IYVSSWAVQV_					0	0	0		ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4;ENST00000441747.6_1_19:1490111-1490306:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3120605349541	2	576.308406	1150.60226	3.0328	0.0017479	1.6462	0.00094873	4.6791	0.0026966	576.8100074930877	62.292	0.7346	64.25	63.999	64.733	1.9571					50	23	3	0	0	0	0.60583	1	26163	26163		22.736	0.98964	1	2007800			12396	7463	6251	6279	15024	15024					0.03298298648792297
IYYIDMQKF	9	Unmodified	_IYYIDMQKF_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.8041259646416	2	610.804642	1219.59473	0.29656	0.00018114	0.039245	2.3971E-05	0.3358	0.00020511	610.8043188511986	56.271	0.3673	57.68	57.505	57.872	1.4099					28	12	3	0	0	0	0.040497	2	23561	23561;23610		75.761	31.903	1	8761300			12397	2731	6252	6280	15025;15026	15025					-0.006281769431325301
IYYIDMQKF	9	Unmodified	_IYYIDMQKF_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.8044921755791	2	610.804642	1219.59473	0.74969	0.00045792	-1.3265	-0.00081025	-0.57684	-0.00035233	610.803596321957	55.764	0.30183	57.732	57.599	57.901	1.9684					24	10	3	0	0	0	0.031145	2	23378	23378;23426		85.642	24.284	1	5789500			12398	2731	6252	6280	15027;15028	15027					-0.006281769431325301
IYYRFLTL	8	Unmodified	_IYYRFLTL_					0	0	0		ENSG00000109133|ENST00000504986|TMEM33	ENSG00000109133|ENST00000504986|TMEM33	ENSG00000109133|ENST00000504986|TMEM33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3137695193291	2	544.810585	1087.60662	1.2855	0.00070035	1.7425	0.00094934	3.028	0.0016497	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.82039	1	29667	29667		19.439	5.9311	1	6733700			12399	1660	6253	6281	15029	15029					0.06631807862368078
IYYVDVQKF	9	Unmodified	_IYYVDVQKF_					0	0	0		ENSG00000160410|ENST00000291842|SHKBP1	ENSG00000160410|ENST00000291842|SHKBP1	ENSG00000160410|ENST00000291842|SHKBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8104736208916	2	587.810782	1173.60701	1.5515	0.00091201	-1.2406	-0.00072926	0.3109	0.00018275	587.8097370182642	48.983	0.46902	50.371	50.14	50.609	1.388					47	14	5	0	0	0	0.0069529	3	20508	20460;20508;20546		114.65	42.727	1	23826000			12400	3558	6254	6282	15030;15031;15032	15031					0.027151827915531612
IYYVDVQKF	9	Unmodified	_IYYVDVQKF_					0	0	0		ENSG00000160410|ENST00000291842|SHKBP1	ENSG00000160410|ENST00000291842|SHKBP1	ENSG00000160410|ENST00000291842|SHKBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8107177615166	2	587.810782	1173.60701	2.0484	0.0012041	-1.9652	-0.0011552	0.08316	4.8882E-05	587.8093371399259	48.49	0.43369	50.467	50.266	50.7	1.9772					41	13	4	0	0	0	0.026734	3	20313	20265;20313;20356		92.653	32.978	1	23495000			12401	3558	6254	6282	15033;15034;15035	15034					0.027151827915531612
IYYVESEKC	9	Unmodified	_IYYVESEKC_					0	0	0			REV__ENSG00000204548|ENST00000376314|DEFB121	REV__ENSG00000204548|ENST00000376314|DEFB121	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	378.1238586306572	3	378.510964	1132.51106	-0.30518	-0.00011551	3.6901	0.0013967	3.3849	0.0012812	378.51244447277196	76.026	0.18878	76.026	75.884	76.073	0					8	5	2	0	0	0	0.11944	1	31612	31612		0.96228	0.18574	1	357600	+		12402	11789	6255	6283	15036	15036					-0.049893331108251004
IYYYIFRRWY	10	Unmodified	_IYYYIFRRWY_					0	0	0		tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	772.4003784060478	2	771.898254	1541.78196	1.7754	0.0013704	2.3518	0.0018154	4.1272	0.0031858	771.9009819415713	39.987	0.286	39.987	39.82	40.106	0					13	8	2	0	0	0	0.81324	1	16783	16783		10.824	8.0887	1	443810			12403	16869	6256	6284	15037	15037					0.032736026565999055
IYYYIFRRWY	10	Unmodified	_IYYYIFRRWY_					0	0	0		tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	772.4034911990166	2	771.898254	1541.78196	1.6238	0.0012534	2.979	0.0022995	4.6028	0.0035529	771.9009411319815	39.527	0.34568	39.84	39.609	39.955	0.31263					27	10	3	0	0	0	0.81324	2	16581	16581;16632		10.824	7.8287	1	937030			12404	16869	6256	6284	15038;15039	15038					0.032736026565999055
IYYYIFRRWY	10	Unmodified	_IYYYIFRRWY_					0	0	0		tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	772.4026367068291	2	771.898254	1541.78196	0.78014	0.00060219	1.1371	0.00087773	1.9173	0.0014799	772.4006350522523	38.192	0.18863	39.476	39.337	39.526	1.284					10	5	2	0	0	0	0.81324	1	16006	16006		10.824	2.6684	1	1637200			12405	16869	6256	6284	15040	15040					0.032736026565999055
IYYYIFRRWY	10	Unmodified	_IYYYIFRRWY_					0	0	0		tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	772.4020263552666	2	771.898254	1541.78196	0.30173	0.00023291	1.3401	0.0010344	1.6418	0.0012673	772.4000321381486	37.628	0.26537	39.448	39.283	39.548	1.8202					20	8	3	0	0	0	0.75645	1	15771	15771		15.847	10.115	1	1569800			12406	16869	6256	6284	15041	15041					0.032736026565999055
KAAIIIWIPTL	11	Unmodified	_KAAIIIWIPTL_					0	0	0			REV__ENSG00000136052|ENST00000258538|SLC41A2	REV__ENSG00000136052|ENST00000258538|SLC41A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	414.2895690798759	3	413.600553	1237.77983	1.7048	0.00070509	0.92806	0.00038384	2.6328	0.0010889	413.9352179652436	49.047	0.90025	51.025	50.669	51.569	1.9772					67	28	3	0	0	0	0.14606	1	20411	20411		4.4062	2.6639	1	8792100	+		12407	9969	6257	6285	15042	15042					0.17045173918813816
KAAIIIWIPTL	11	Unmodified	_KAAIIIWIPTL_					0	0	0			REV__ENSG00000136052|ENST00000258538|SLC41A2	REV__ENSG00000136052|ENST00000258538|SLC41A2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	413.600553	1237.77983	1.9352	0.00080039	1.0116	0.00041842	2.9468	0.0012188	413.9353661056283	50.77	1.3085	51.099	50.574	51.883	0.32824	-0.028442	0.00020753	NaN	7.0371	89	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6982900	+		12408	9969	6257	6285							0.17045173918813816
KAAIIIWIPTL	11	Unmodified	_KAAIIIWIPTL_					0	0	0			REV__ENSG00000136052|ENST00000258538|SLC41A2	REV__ENSG00000136052|ENST00000258538|SLC41A2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	413.600553	1237.77983	2.1997	0.00090978	0.44683	0.00018481	2.6465	0.0010946	413.9350108539735	49.867	1.0026	51.258	50.857	51.86	1.3911	0.13102	-0.00049329	NaN	7.0371	51	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11585000	+		12409	9969	6257	6285							0.17045173918813816
KAALWYGV	8	Unmodified	_KAALWYGV_					0	0	0		tr|A0A7D6ZXU1|A0A7D6ZXU1_9CLOT2,3-butanedioldehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23290PE=3SV=1	tr|A0A7D6ZXU1|A0A7D6ZXU1_9CLOT2,3-butanedioldehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23290PE=3SV=1	tr|A0A7D6ZXU1|A0A7D6ZXU1_9CLOT2,3-butanedioldehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23290PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2622863650322	2	454.255446	906.496338	2.8409	0.0012905	2.7178	0.0012346	5.5587	0.0025251	454.2572110448365	47.436	0.61797	49.412	49.031	49.649	1.976					40	19	3	0	0	0	0.88504	1	19814	19814		5.7604	2.8712	1	3933000			12410	17195	6258	6286	15043	15043					0.03935007593986484
KAAMAGGA	8	Unmodified	_KAAMAGGA_					0	0	0			REV__nc|nan|Q7Z7L8|C11orf96	REV__nc|nan|Q7Z7L8|C11orf96	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9028503298759	2	338.675974	675.337395	1.7251	0.00058425	-2.2189	-0.00075147	-0.49375	-0.00016722	338.67519787477784	47.999	0.92367	49.977	49.714	50.637	1.9772					40	29	2	0	0	0	2.3239	1	20366	20366		5.2307	2.6532	1	10192000	+		12411	14580	6259	6287	15044	15044					-0.013260293057896888
KAAMAGGA	8	Unmodified	_KAAMAGGA_					0	0	0			REV__nc|nan|Q7Z7L8|C11orf96	REV__nc|nan|Q7Z7L8|C11orf96	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	338.675974	675.337395	1.2223	0.00041398	-0.88851	-0.00030092	0.33383	0.00011306	338.67563541782704	49.77	0.91211	50.1	49.696	50.608	0.33019	0.061746	0.00043833	NaN	5.2307	40	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9455200	+		12412	14580	6259	6287							-0.013260293057896888
KAAPRNGM	8	Unmodified	_KAAPRNGM_					0	0	0			REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.7265807986259	2	422.726529	843.438506	1.1233	0.00047484	-1.7325	-0.00073236	-0.60918	-0.00025752	422.7258203309731	48.392	0.30163	48.392	48.222	48.524	0					16	9	2	0	0	0	0.89008	1	20212	20212		2.5775	0	1	585370	+		12413	12246	6260	6288	15045	15045					0.010524223969127888
KAAPRNGM	8	Unmodified	_KAAPRNGM_					0	0	0			REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	422.726529	843.438506	1.1233	0.00047484	-1.7325	-0.00073236	-0.60918	-0.00025752	422.7258203309731	48.392	0.30163	48.392	48.222	48.524	0	0.069257	-0.00024461	NaN	2.5775	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	585370	+		12414	12246	6260	6288							0.010524223969127888
KAAPRNGM	8	Unmodified	_KAAPRNGM_					0	0	0			REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	REV__ENST00000276079.12_1_X:70504298-70511637:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	422.726529	843.438506	2.0395	0.00086214	-1.1371	-0.00048066	0.90241	0.00038147	422.7259888346067	47.923	0.23514	48.254	48.132	48.367	0.33034	-0.069257	0.00025879	NaN	2.5775	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	437900	+		12415	12246	6260	6288							0.010524223969127888
KAAWVNEIR	9	Unmodified	_KAAWVNEIR_					0	0	0		nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8029662966728	2	543.806365	1085.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.17	1	12.864	12.364	13.364	0.69396								0	0	0	0.42693	1	5056	5056		4.3292	0	1				12416	2303	6261	6289	15046	15046					0.058802539457246894
KACKPASL	8	Unmodified	_KACKPASL_					0	0	0		ENST00000276925.6_1_9:22005775-22005913:-|nuORF	ENST00000276925.6_1_9:22005775-22005913:-|nuORF	ENST00000276925.6_1_9:22005775-22005913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.2349120974541	2	409.233656	816.452759	2.8655	0.0011726	2.0648	0.000845	4.9303	0.0020176	409.2342801874243	107.84	0.11777	108	107.93	108.05	0.15781					10	6	2	0	0	0	0.8909	1	46508	46508		2.0598	0	1	39333000			12417	5690	6262	6290	15047	15047					0.037190748251987316
KADKVEFAYF	10	Unmodified	_KADKVEFAYF_					0	0	0			REV__ENSG00000164294|ENST00000503787|GPX8	REV__ENSG00000164294|ENST00000503787|GPX8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3157836794853	2	609.313689	1216.61282	1.8927	0.0011532	1.873	0.0011413	3.7657	0.0022945	609.3148344031255	69.205	0.37901	70.571	70.35	70.729	1.3657					31	12	3	0	0	0	0.6819	1	29048	29048		19.257	2.3147	1	7069900	+		12418	10730	6263	6291	15048	15048					0.013182813032244667
KADMINKNMTH	11	Unmodified	_KADMINKNMTH_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000120539|Q96GX5-2|MASTL;MASTL|p.W323Cfs*9|1|0.07|ENSG00000120539|chr10:27167258-27167259|-/C|frameshift_variant	ENSG00000120539|ENST00000375940|MASTL	ENSG00000120539|ENST00000375940|MASTL	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831054568291	3	434.881285	1301.62203	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.793	1	75.589	75.089	76.089	1.7962								0	0	0	0.63775	1	30954	30954		1.4551	0.67859	1				12419	2108	6264	6292	15049	15049					-0.016720166743880327
KAFGSTIVI	9	Unmodified	_KAFGSTIVI_					0	0	0		nc|ENSG00000158290|Q13620-3|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620-3|CUL4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2823669314384	2	468.28166	934.548768	2.2987	0.0010764	-0.723	-0.00033857	1.5757	0.00073788	468.2812053452878	41.74	0.4334	43.066	42.843	43.276	1.3254					34	13	3	0	0	0	0.079895	2	17495	17451;17495		56.177	16.22	1	5064500			12420	3497	6265	6293	15050;15051	15051					0.07887545936932838
KAFGSTIVI	9	Unmodified	_KAFGSTIVI_					0	0	0		nc|ENSG00000158290|Q13620-3|CUL4B;ENSG00000158290|ENST00000371322|CUL4B;nc|ENSG00000158290|Q13620|CUL4B	nc|ENSG00000158290|Q13620-3|CUL4B	nc|ENSG00000158290|Q13620-3|CUL4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2826110720634	2	468.28166	934.548768	2.2751	0.0010654	-0.06403	-2.9984E-05	2.211	0.0010354	468.2815460647966	41.243	0.39679	43.136	42.928	43.325	1.8927					30	12	4	0	0	0	0.086433	2	17287	17240;17287		53.833	5.9149	1	4366900			12421	3497	6265	6293	15052;15053	15053					0.07887545936932838
KAFLNAIM	8	Unmodified	_KAFLNAIM_					0	0	0		ENSG00000116254|ENST00000262450|CHD5;ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000116254|ENST00000262450|CHD5;ENSG00000111642|ENST00000544040|CHD4	ENSG00000116254|ENST00000262450|CHD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.2581359744072	2	454.257131	906.499709	2.2309	0.0010134	-1.3209	-0.00060005	0.90995	0.00041335	454.25721331976996	47.965	0.65717	49.353	48.895	49.552	1.388					40	20	3	0	0	0	0.54738	3	20068	20022;20068;20123		44.407	16.405	1	3374600			12422	1963;1746	6266	6294	15054;15055;15056	15055					0.04271934376356512
KAFLNAIM	8	Unmodified	_KAFLNAIM_					0	0	0		ENSG00000116254|ENST00000262450|CHD5;ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000116254|ENST00000262450|CHD5;ENSG00000111642|ENST00000544040|CHD4	ENSG00000116254|ENST00000262450|CHD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.2588073611259	2	454.257131	906.499709	2.8409	0.0012905	-0.99244	-0.00045082	1.8484	0.00083966	454.2572110448365	47.436	0.61797	49.412	49.031	49.649	1.976					40	19	3	0	0	0	0.54738	2	19861	19861;19917		44.407	16.717	1	3933000			12423	1963;1746	6266	6294	15057;15058	15057					0.04271934376356512
KAFQKIVVL	9	Unmodified	_KAFQKIVVL_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3411743044853	2	523.342052	1044.66955	0.60449	0.00031636	-1.9318	-0.001011	-1.3274	-0.00069466	523.3414476685145	33.289	0.40851	34.567	34.355	34.763	1.2782					80	27	4	0	0	0	0.0054014	2	13905	13905;13947		120.45	59.093	1	103690000			12424	2718;1028	6267	6295	15059;15060	15059					0.14900373650425536
KAFQKIVVL	9	Unmodified	_KAFQKIVVL_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3419677615166	2	523.342052	1044.66955	0.8111	0.00042448	-0.96113	-0.000503	-0.15003	-7.8517E-05	523.3415983548255	32.712	0.53776	34.537	34.273	34.811	1.8246					99	30	5	0	0	0	7.2896E-05	5	13682	13643;13682;13721;13761;13800		147.83	76.698	1	80815000			12425	2718;1028	6267	6295	15061;15062;15063;15064;15065	15062					0.14900373650425536
KAFQKIVVL	9	Unmodified	_KAFQKIVVL_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.2300903201103	3	349.23046	1044.66955	0.38513	0.0001345	-1.4739	-0.00051473	-1.0888	-0.00038023	349.2299491851652	32.739	0.46486	34.564	34.273	34.738	1.8246					73	24	4	0	0	0	0.10294	2	13689	13650;13689		43.772	5.5968	1	65361000			12426	2718;1028	6267	6295	15066;15067	15067					0.14900373650425536
KAFRGRTV	8	Unmodified	_KAFRGRTV_					0	0	0		nc|ENSG00000158691|O43309-2|ZSCAN12;ENSG00000158691|ENST00000684592|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	467.2474243044853	2	467.782693	933.550834	1.5711	0.00073493	-1.8101	-0.00084674	-0.239	-0.0001118	467.78192457949365	54.722	0.25666	56.69	56.583	56.84	1.9684					15	8	2	0	0	0	2.3239	1	22922	22922		4.3292	1.44	1	2788900			12427	3506	6268	6296	15068	15068					0.08140019465429305
KAFRGRTV	8	Unmodified	_KAFRGRTV_					0	0	0		nc|ENSG00000158691|O43309-2|ZSCAN12;ENSG00000158691|ENST00000684592|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	467.782693	933.550834	1.6204	0.00075801	-1.4058	-0.00065761	0.21462	0.0001004	467.7823598783959	55.229	0.28707	56.639	56.476	56.763	1.4099	-0.02575	0.00021694	NaN	4.3292	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1871900			12428	3506	6268	6296							0.08140019465429305
KAFSYLPSL	9	Unmodified	_KAFSYLPSL_					0	0	0		ENSG00000196646|ENST00000343979|ZNF136;ENST00000464860.1_1_19:12296590-12298813:+|nuORF	ENSG00000196646|ENST00000343979|ZNF136	ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1025.572192370892	1	1025.56661	1024.55933	3.1301	0.0032101	1.3604	0.0013952	4.4905	0.0046053	1025.5684372250619	86.846	0.34948	87.938	87.74	88.09	1.0918					20	12	2	0	0	0	0.27148	1	36652	36652		26.884	1.4843	1	6597900			12429	4954	6269	6297	15069	15069					0.04803528591378381
KAFSYLPSL	9	Unmodified	_KAFSYLPSL_					0	0	0		ENSG00000196646|ENST00000343979|ZNF136;ENST00000464860.1_1_19:12296590-12298813:+|nuORF	ENSG00000196646|ENST00000343979|ZNF136	ENSG00000196646|ENST00000343979|ZNF136	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1025.568408191204	1	1025.56661	1024.55933	4.4118	0.0045246	-0.11287	-0.00011576	4.299	0.0044089	1025.566720066637	86.321	0.31766	87.868	87.746	88.064	1.547					19	11	2	0	0	0	0.27148	1	36353	36353		26.884	0.61551	1	7569600			12430	4954	6269	6297	15070	15070					0.04803528591378381
KAGAGLHA	8	Unmodified	_KAGAGLHA_					0	0	0		ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.4123412966728	1	724.410049	723.402772	2.583	0.0018712	1.7293	0.0012527	4.3123	0.0031239	724.4100973310938	104.41	0.24755	104.57	104.47	104.71	0.16055					22	12	3	0	0	0	0.89008	1	44229	44229		2.5775	0	1	26370000			12431	2254	6270	6298	15071	15071					0.030007082115616868
KAGAGLHA	8	Unmodified	_KAGAGLHA_					0	0	0		ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	724.410049	723.402772	1.3923	0.0010086	1.637	0.0011859	3.0293	0.0021945	724.4107529616192	104.47	0.16699	104.47	104.42	104.58	0	-0.056779	0.00011925	NaN	2.5775	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11462000			12432	2254	6270	6298							0.030007082115616868
KAGAGLHA	8	Unmodified	_KAGAGLHA_					0	0	0		ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	ENSG00000125285|ENST00000376945|SOX21	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	724.410049	723.402772	2.7098	0.001963	0.4626	0.00033511	3.1724	0.0022981	724.4097417449999	104.44	0.18535	104.5	104.44	104.62	0.056801	-0.02286	-0.00073153	NaN	2.5775	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12866000			12433	2254	6270	6298							0.030007082115616868
KAGTRARAT	9	Unmodified	_KAGTRARAT_					0	0	0			REV__ENST00000204566.6_1_15:65275909-65282127:-|nuORF	REV__ENST00000204566.6_1_15:65275909-65282127:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1856872439384	3	311.185914	930.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.77	1	103.95	103.45	104.45	0.1731								0	0	0	0.42693	1	43774	43774		1.0715	0	1		+		12434	12053	6271	6299	15072	15072					0.06786527597398617
KAGVGVIW	8	Unmodified	_KAGVGVIW_					0	0	0		ENST00000487002.1_1_1:155279413-155279551:+|nuORF	ENST00000487002.1_1_1:155279413-155279551:+|nuORF	ENST00000487002.1_1_1:155279413-155279551:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	829.4968749880791	1	829.49305	828.485774	2.9901	0.0024803	-0.055222	-4.5806E-05	2.9349	0.0024345	829.4926429284475	109.45	0.20816	109.6	109.49	109.7	0.1548					14	8	2	0	0	0	0.87935	1	47443	47443		9.3474	0	1	8459600			12435	6873	6272	6300	15073	15073					0.06467024939570365
KAHEAKHA	8	Unmodified	_KAHEAKHA_					0	0	0		ENSG00000178175|ENST00000318442|ZNF366	ENSG00000178175|ENST00000318442|ZNF366	ENSG00000178175|ENST00000318442|ZNF366	MSMS	GG20161007_CRH_Patient100_W632_02	4	446.1297180056572	2	446.243401	890.472249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.13	1	100.34	99.84	100.84	0.20527								0	0	0	1.0178	1	42110	42110		0.69038	0	1				12436	4476	6273	6301	15074	15074					0.02263167160310786
KAIDVVVMV	9	Oxidation (M)	_KAIDVVVM(Oxidation (M))V_		KAIDVVVM(1)V		KAIDVVVM(60)V	0	0	1		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2892944216728	2	495.288628	988.562703	2.3183	0.0011482	-0.25945	-0.0001285	2.0588	0.0010197	495.2883995004691	39.862	0.61674	41.172	40.991	41.608	1.3102					39	19	4	0	0	0	0.070055	2	16693	16693;16747		60.074	22.1	1	4511800			12437	5124	6274	6302	15075;15076	15075		90			0.06796455373751087
KAIDVVVMV	9	Oxidation (M)	_KAIDVVVM(Oxidation (M))V_		KAIDVVVM(1)V		KAIDVVVM(79)V	0	0	1		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2903625369072	2	495.288628	988.562703	1.588	0.00078652	0.82144	0.00040685	2.4094	0.0011934	495.2890700685432	39.399	0.5198	41.236	41.007	41.527	1.8366					36	16	3	0	0	0	0.037098	3	16520	16478;16520;16564		78.728	27.768	1	4225300			12438	5124	6274	6302	15077;15078;15079	15078		90			0.06796455373751087
KAIDVVVMV	9	Unmodified	_KAIDVVVMV_					0	0	0		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2934142947197	2	487.291171	972.567789	2.2992	0.0011204	1.0114	0.00049285	3.3106	0.0016132	487.29183589666013	49.607	1.0329	50.999	50.735	51.767	1.3911					79	32	4	0	0	0	0.16939	1	20719	20719		36.506	5.8697	1	14772000			12439	5124	6274	6303	15080	15080					0.08040759236359918
KAIDVVVMV	9	Unmodified	_KAIDVVVMV_					0	0	0		nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1;ENSG00000204104|ENST00000373327|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	nc|ENSG00000204104|Q8TDR0-2|TRAF3IP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2928954958916	2	487.291171	972.567789	1.7705	0.00086275	1.3039	0.00063536	3.0744	0.0014981	487.29186843010996	48.993	1.0586	50.97	50.761	51.819	1.9772					75	33	4	0	0	0	0.086433	2	20487	20487;20536		53.833	13.875	1	14034000			12440	5124	6274	6303	15081;15082	15081					0.08040759236359918
KAIKDMIEI	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KAIKDMIEI_					1	0	0			REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.8134033083916	2	551.812467	1101.61038	2.0467	0.0011294	-0.69393	-0.00038292	1.3528	0.00074647	551.812554971625	47.166	0.28478	48.548	48.378	48.663	1.3825					20	8	3	0	0	0	0.11669	1	19743	19743		43.772	7.2662	1	2105200	+		12441	15523	6275	6304	15083	15083					0.06364109573928545
KAIKDMIEI	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KAIKDMIEI_					1	0	0			REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	551.812467	1101.61038	2.0467	0.0011294	-0.69393	-0.00038292	1.3528	0.00074647	551.812554971625	47.166	0.28478	48.548	48.378	48.663	1.3825	-0.056339	-0.00039833	NaN	43.772	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2105200	+		12442	15523	6275	6304							0.06364109573928545
KAIKDMIEI	9	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))KAIKDMIEI_					1	0	0			REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	REV__tr|A0A7D6VUY7|A0A7D6VUY7_9CLOTTIGR04540familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08870PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	551.812467	1101.61038	1.8538	0.0010229	-0.11167	-6.1619E-05	1.7421	0.00096131	551.8127117462567	46.69	0.32974	48.661	48.472	48.802	1.9703	0.056339	0.00024427	NaN	43.772	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1573200	+		12443	15523	6275	6304							0.06364109573928545
KAIQFRKKIKL	11	Unmodified	_KAIQFRKKIKL_					0	0	0		tr|A0A553SQT2|A0A553SQT2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07260PE=4SV=1	tr|A0A553SQT2|A0A553SQT2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07260PE=4SV=1	tr|A0A553SQT2|A0A553SQT2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07260PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	458.3123657107353	3	458.309885	1371.90782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.73	104.23	105.23	0.056801								0	0	0	0.63775	1	44195	44195		0.08335	0	1				12444	16529	6276	6305	15084	15084					0.23674734232690753
KAIQPMKK	8	Unmodified	_KAIQPMKK_					0	0	0			REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19	REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19	MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2932922244072	2	472.291505	942.568457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.67	1	99.67	99.17	100.17	0								0	0	0	1.0178	1	41720	41720		2.3027	0	1		+		12445	11187	6277	6306	15085	15085					0.09487598676059861
KAKAPIVP	8	Unmodified	_KAKAPIVP_					0	0	0		tr|A0A7D6VWP6|A0A7D6VWP6_9CLOT1-acyl-sn-glycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09140PE=3SV=1	tr|A0A7D6VWP6|A0A7D6VWP6_9CLOT1-acyl-sn-glycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09140PE=3SV=1	tr|A0A7D6VWP6|A0A7D6VWP6_9CLOT1-acyl-sn-glycerol-3-phosphateacyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09140PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2731506228447	2	412.273638	822.532724	1.3398	0.00055237	-3.4275	-0.0014131	-2.0877	-0.00086071	412.27221499595385	30.221	0.9711	30.507	30.115	31.087	0.2859					57	32	2	0	0	0	0.89178	1	12762	12762		0.69038	0	1	2817600			12446	16976	6278	6307	15086	15086					0.11435884490686021
KAKCATVP	8	Unmodified	_KAKCATVP_					0	0	0			REV__ENSG00000086102|ENST00000379540|NFX1	REV__ENSG00000086102|ENST00000379540|NFX1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	409.7660400271416	2	409.233656	816.452759	2.9269	0.0011978	2.9843	0.0012213	5.9112	0.0024191	409.2345908382056	107.89	0.14696	107.94	107.86	108.01	0.052452					18	7	3	0	0	0	2.3239	1	46260	46260		4.756	3.9624	1	26913000	+		12447	8858	6279	6308	15087	15087					0.03719074825187363
KAKGSTKS	8	Unmodified	_KAKGSTKS_					0	0	0			REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	403.7389709353447	2	403.74016	805.465767	1.7143	0.00069212	-3.1982	-0.0012912	-1.4839	-0.00059911	403.7388394231277	66.008	0.81831	67.407	66.849	67.668	1.3989					75	26	5	0	0	0	0.89181	1	27705	27705		0.6015	0	1	9683300	+		12448	13316	6280	6309	15088	15088					0.05525229208944893
KAKGSTKS	8	Unmodified	_KAKGSTKS_					0	0	0			REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	403.74016	805.465767	0.26026	0.00010508	-3.8692	-0.0015621	-3.6089	-0.0014571	403.7383746477382	67.193	0.54819	67.193	66.924	67.473	0	-0.21224	6.8178E-05	NaN	0.6015	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18802000	+		12449	13316	6280	6309							0.05525229208944893
KAKGSTKS	8	Unmodified	_KAKGSTKS_					0	0	0			REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	403.74016	805.465767	1.9417	0.00078394	-4.9024	-0.0019793	-2.9607	-0.0011953	403.73794777760537	67.069	0.49307	67.392	67.126	67.619	0.32269	-0.013159	-0.00076613	NaN	0.6015	42	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17848000	+		12450	13316	6280	6309							0.05525229208944893
KAKGSTKS	8	Unmodified	_KAKGSTKS_					0	0	0			REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	REV__nc|ENSG00000123243|Q86UX2-4|ITIH5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	403.74016	805.465767	1.647	0.00066497	-3.7148	-0.0014998	-2.0678	-0.00083484	403.73863926730047	65.72	0.82796	67.629	67.063	67.891	1.9085	0.2235	0.00019282	NaN	0.6015	58	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8382200	+		12451	13316	6280	6309							0.05525229208944893
KAKGTGGG	8	Unmodified	_KAKGTGGG_					0	0	0		ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	ENSG00000077420|ENST00000376236|APBB1IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.1927978396416	2	338.192845	674.371138	0.14174	4.7935E-05	0.75168	0.00025421	0.89342	0.00030215	338.1928959263941	53.225	0.34829	55.195	55.039	55.387	1.9697					18	13	2	0	0	0	0.89178	1	22345	22345		0.69038	0	1	2902100			12452	963	6281	6310	15089	15089					0.020927154576270368
KAKRTCFR	8	Unmodified	_KAKRTCFR_					0	0	0		CD163L1|p.R461Ifs*9|1|0.16|ENSG00000177675|chr12:7403560-7403561|TC/-|frameshift_variant;nc|ENSG00000177675|Q9NR16-3|CD163L1;CD163L1|p.D1069Kfs*27|1|0.38|ENSG00000177675|chr12:7374630-7374649|CACACCACGTGGGCATCGCT/-|frameshift_variant;nc|ENSG00000177675|Q9NR16-2|CD163L1;ENSG00000177675|ENST00000313599|CD163L1;nc|ENSG00000177675|Q9NR16-4|CD163L1	CD163L1|p.R461Ifs*9|1|0.16|ENSG00000177675|chr12:7403560-7403561|TC/-|frameshift_variant	CD163L1|p.R461Ifs*9|1|0.16|ENSG00000177675|chr12:7403560-7403561|TC/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	336.8604003787041	3	337.195644	1008.5651	1.4111	0.00047581	-1.3492	-0.00045493	0.061912	2.0877E-05	337.1955618796879	78.509	0.61071	79.776	79.392	80.003	1.2668					25	19	2	0	0	0	2.3239	1	32976	32976		5.7319	3.2334	1	591440			12453	128	6282	6311	15090	15090					0.06116348622060741
KAKRTSFFPG	10	Unmodified	_KAKRTSFFPG_					0	0	0			REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2167541384697	3	380.217102	1137.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.592	1	27.863	27.363	28.363	0.27119								0	0	0	0.66161	1	11537	11537		1.7423	0	1		+		12454	11979	6283	6312	15091	15091					0.06616826979848156
KAKSTSTK	8	Unmodified	_KAKSTSTK_					0	0	0			REV__nc|ENSG00000047849|P27816-5|MAP4	REV__nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7526122927666	2	425.753267	849.491981	2.0609	0.00087743	-3.5558	-0.0015139	-1.4949	-0.00063646	425.75158044801435	69.343	0.46507	70.708	70.443	70.908	1.3657					34	15	3	0	0	0	0.89181	1	29053	29053		0.6015	0.6015	1	9629300	+		12455	8610	6284	6313	15092	15092					0.06121498380412049
KAKSTSTK	8	Unmodified	_KAKSTSTK_					0	0	0			REV__nc|ENSG00000047849|P27816-5|MAP4	REV__nc|ENSG00000047849|P27816-5|MAP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	425.753267	849.491981	0.79155	0.00033701	-4.4777	-0.0019064	-3.6861	-0.0015694	425.7513813759116	70.48	0.50794	70.48	70.21	70.718	0	-0.18378	-0.00032948	NaN	0.6015	41	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16020000	+		12456	8610	6284	6313							0.06121498380412049
KAKSTSTK	8	Unmodified	_KAKSTSTK_					0	0	0			REV__nc|ENSG00000047849|P27816-5|MAP4	REV__nc|ENSG00000047849|P27816-5|MAP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	425.753267	849.491981	1.5744	0.00067029	-4.9237	-0.0020963	-3.3493	-0.001426	425.75109571747254	70.309	0.57301	70.632	70.319	70.892	0.32224	-0.032688	-0.00070923	NaN	0.6015	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19654000	+		12457	8610	6284	6313							0.06121498380412049
KAKTRKKRAQ	10	Unmodified	_KAKTRKKRAQ_					0	0	0			REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5983459353447	3	405.598317	1213.77312	0.87774	0.00035601	-0.31289	-0.00012691	0.56485	0.0002291	405.59817874366803	90.418	0.4577	90.418	90.225	90.682	0					44	14	4	0	0	0	0.89803	1	37808	37808		0.62683	0	1	6226700	+		12458	8936	6285	6314	15093	15093					0.17478673810796863
KAKTRKKRAQ	10	Unmodified	_KAKTRKKRAQ_					0	0	0			REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	406.2094909548759	3	405.598317	1213.77312	0.87774	0.00035601	-0.31289	-0.00012691	0.56485	0.0002291	405.59817874366803	90.418	0.4577	90.418	90.225	90.682	0					44	14	4	0	0	0	0.1256	1	37822	37822		0.12286	0	1	6226700	+		12459	8936	6285	6314	15094	15094					0.17478673810796863
KAKTRKKRAQ	10	Unmodified	_KAKTRKKRAQ_					0	0	0			REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5985290408134	3	405.598317	1213.77312	2.7762	0.001126	-2.0238	-0.00082084	0.75241	0.00030517	405.59753741639327	90.363	0.46541	90.572	90.307	90.772	0.20904					42	14	4	0	0	0	0.8974	1	37915	37915		1.7423	1.1154	1	8078400	+		12460	8936	6285	6314	15095	15095					0.17478673810796863
KAKTRKKRAQ	10	Unmodified	_KAKTRKKRAQ_					0	0	0			REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	REV__ENST00000507909.1_1_6:35888243-35888866:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.7086364626884	3	405.598317	1213.77312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.659	1	90.868	90.368	91.368	0.20904								0	0	0	0.66227	1	37988	37988		0.62683	0	1		+		12461	8936	6285	6314	15096	15096					0.17478673810796863
KALKTLRRF	9	Unmodified	_KALKTLRRF_					0	0	0			REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2488891482353	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.478	1	92.459	91.959	92.959	0.98157								0	0	0	0.42693	1	38527	38527		0.26902	0	1		+		12462	8450	6286	6315	15097	15097					0.1634538552182221
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9305297732353	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.59	1	101.59	101.09	102.09	0								0	0	0	0.66264	1	42542	42542		0	0	1				12463	2046	6287	6316	15098	15098					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9316284060478	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.84	1	101.84	101.34	102.34	0								0	0	0	0.66264	1	42649	42649		0	0	1				12464	2046	6287	6316	15099	15099					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9293701052666	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	101.97	101.47	102.47	0								0	0	0	0.66264	1	42702	42702		0	0	1				12465	2046	6287	6316	15100	15100					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9293090701103	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.11	1	102.11	101.61	102.61	0								0	0	0	0.66264	1	42767	42767		0	0	1				12466	2046	6287	6316	15101	15101					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9268066287041	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.24	1	102.24	101.74	102.74	0								0	0	0	0.66264	1	42833	42833		0	0	1				12467	2046	6287	6316	15102	15102					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9242431521416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.4	1	102.4	101.9	102.9	0								0	0	0	0.66264	1	42908	42908		0	0	1				12468	2046	6287	6316	15103	15103					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9275390505791	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.85	1	102.85	102.35	103.35	0								0	0	0	0.66264	1	43111	43111		0	0	1				12469	2046	6287	6316	15104	15104					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9292480349541	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.66	1	103.66	103.16	104.16	0								0	0	0	0.66264	1	43573	43573		0	0	1				12470	2046	6287	6316	15105	15105					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9301025271416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.76	1	103.76	103.26	104.26	0								0	0	0	0.66264	1	43638	43638		0	0	1				12471	2046	6287	6316	15106	15106					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9314453005791	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.86	1	103.86	103.36	104.36	0								0	0	0	0.66264	1	43703	43703		0	0	1				12472	2046	6287	6316	15107	15107					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9286987185478	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	103.95	103.45	104.45	0								0	0	0	0.66264	1	43768	43768		0	0	1				12473	2046	6287	6316	15108	15108					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9294311404228	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.04	103.54	104.54	0								0	0	0	0.66264	1	43832	43832		0	0	1				12474	2046	6287	6316	15109	15109					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9279662966728	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.37	1	104.37	103.87	104.87	0								0	0	0	0.66264	1	44029	44029		0	0	1				12475	2046	6287	6316	15110	15110					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9296142458916	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.47	1	104.47	103.97	104.97	0								0	0	0	0.66264	1	44092	44092		0	0	1				12476	2046	6287	6316	15111	15111					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9299804568291	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.58	1	104.58	104.08	105.08	0								0	0	0	0.66264	1	44170	44170		0	0	1				12477	2046	6287	6316	15112	15112					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9293090701103	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.67	104.17	105.17	0								0	0	0	0.66264	1	44235	44235		0	0	1				12478	2046	6287	6316	15113	15113					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9307128787041	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.77	1	104.77	104.27	105.27	0								0	0	0	0.66264	1	44299	44299		0	0	1				12479	2046	6287	6316	15114	15114					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9290649294853	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.86	1	104.86	104.36	105.36	0								0	0	0	0.66264	1	44365	44365		0	0	1				12480	2046	6287	6316	15115	15115					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9299804568291	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.95	1	104.95	104.45	105.45	0								0	0	0	0.66264	1	44429	44429		0	0	1				12481	2046	6287	6316	15116	15116					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9294311404228	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.04	1	105.04	104.54	105.54	0								0	0	0	0.66264	1	44495	44495		0	0	1				12482	2046	6287	6316	15117	15117					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9292480349541	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.14	1	105.14	104.64	105.64	0								0	0	0	0.66264	1	44559	44559		0	0	1				12483	2046	6287	6316	15118	15118					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.9305908083916	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.64	1	108.69	108.19	109.19	0.050644								0	0	0	0.66264	1	46732	46732		0	0	1				12484	2046	6287	6316	15119	15119					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.9293090701103	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.74	1	108.79	108.29	109.29	0.050644								0	0	0	0.66264	1	46794	46794		0	0	1				12485	2046	6287	6316	15120	15120					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9287597537041	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.26	1	108.42	107.92	108.92	0.15795								0	0	0	0.66264	1	46700	46700		0	0	1				12486	2046	6287	6316	15121	15121					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9288818240166	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.37	1	108.53	108.03	109.03	0.15795								0	0	0	0.66264	1	46768	46768		0	0	1				12487	2046	6287	6316	15122	15122					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9290038943291	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.47	1	108.63	108.13	109.13	0.1548								0	0	0	0.66264	1	46834	46834		0	0	1				12488	2046	6287	6316	15123	15123					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9296752810478	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.59	1	108.74	108.24	109.24	0.1548								0	0	0	0.66264	1	46910	46910		0	0	1				12489	2046	6287	6316	15124	15124					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9291869997978	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.72	1	108.87	108.37	109.37	0.1548								0	0	0	0.66264	1	46997	46997		0	0	1				12490	2046	6287	6316	15125	15125					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9298583865166	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.83	1	108.98	108.48	109.48	0.1548								0	0	0	0.66264	1	47067	47067		0	0	1				12491	2046	6287	6316	15126	15126					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9291869997978	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.94	1	109.1	108.6	109.6	0.1548								0	0	0	0.66264	1	47142	47142		0	0	1				12492	2046	6287	6316	15127	15127					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9291869997978	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.05	1	109.2	108.7	109.7	0.1548								0	0	0	0.66264	1	47209	47209		0	0	1				12493	2046	6287	6316	15128	15128					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9301025271416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.15	1	109.31	108.81	109.81	0.1548								0	0	0	0.66264	1	47275	47275		0	0	1				12494	2046	6287	6316	15129	15129					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9292480349541	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.26	1	109.41	108.91	109.91	0.1548								0	0	0	0.66264	1	47341	47341		0	0	1				12495	2046	6287	6316	15130	15130					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9313842654228	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.38	1	109.54	109.04	110.04	0.1548								0	0	0	0.66264	1	47417	47417		0	0	1				12496	2046	6287	6316	15131	15131					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9327880740166	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.5	1	109.66	109.16	110.16	0.1548								0	0	0	0.66264	1	47484	47484		0	0	1				12497	2046	6287	6316	15132	15132					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9356567263603	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.65	1	109.81	109.31	110.31	0.15228								0	0	0	0.66264	1	47558	47558		0	0	1				12498	2046	6287	6316	15133	15133					0.26589159426657716
KALVKLKLKK	10	Unmodified	_KALVKLKLKK_					0	0	0		ENST00000512858.1_1_4:88977413-88986648:+|nuORF;PKD2|p.M870Wfs*6|1|0.22|ENSG00000118762|chr4:88074895-88074895|T/-|frameshift_variant;nc|ENSG00000118762|Q13563-5|PKD2;nc|ENSG00000118762|Q13563-3|PKD2;ENSG00000118762|ENST00000237596|PKD2	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	ENST00000512858.1_1_4:88977413-88986648:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.9369384646416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.79	1	109.95	109.45	110.45	0.15228								0	0	0	0.66264	1	47622	47622		0	0	1				12499	2046	6287	6316	15134	15134					0.26589159426657716
KAMKALESIFK	11	Unmodified	_KAMKALESIFK_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1;DOCK1-NPS|1|fusion	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3719970583916	2	633.367941	1264.72133	2.4138	0.0015288	2.0122	0.0012745	4.426	0.0028033	633.3690434173299	80.495	1.7494	81.746	80.955	82.705	1.2512					154	56	5	0	0	0	1.0214	1	33898	33898		2.4985	0.84587	1	8479200			12500	3272	6288	6317	15135	15135					0.09955749281994031
KAMKQKQLRRG	11	Unmodified	_KAMKQKQLRRG_					0	0	0		ENST00000396362.3_1_7:27087888-27088119:+|nuORF	ENST00000396362.3_1_7:27087888-27088119:+|nuORF	ENST00000396362.3_1_7:27087888-27088119:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.6092407107353	3	448.606595	1342.79796	2.9067	0.001304	3.1743	0.001424	6.081	0.002728	448.6079427881507	83.497	1.3326	83.768	83.306	84.639	0.27029					88	42	3	0	0	0	1.0365	1	34962	34962		1.2148	0.51716	1	1862300			12501	6300	6289	6318	15136	15136					0.14026985621831045
KANEIDDTHFL	11	Unmodified	_KANEIDDTHFL_					0	0	0			REV__PTPN14|p.A735Pfs*7|1|0.68|ENSG00000152104|chr1:214383624-214383652|ATGCGGGCCAGGGCCGCCTGCAGCTGGGC/-|frameshift_variant	REV__PTPN14|p.A735Pfs*7|1|0.68|ENSG00000152104|chr1:214383624-214383652|ATGCGGGCCAGGGCCGCCTGCAGCTGGGC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8832885622978	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.97	1	49.358	48.858	49.858	1.388								0	0	0	0.63775	1	20081	20081		0.50596	0	1		+		12502	10413	6290	6319	15137	15137					-0.013567270243811436
KANKLIHM	8	Unmodified	_KANKLIHM_					0	0	0			REV__tr|A0A7D6ZIF5|A0A7D6ZIF5_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03990PE=3SV=1	REV__tr|A0A7D6ZIF5|A0A7D6ZIF5_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03990PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.2279235720634	3	318.856629	953.548056	0.1339	4.2694E-05	1.1947	0.00038093	1.3286	0.00042363	318.8561782395193	24.245	0.15237	24.487	24.412	24.564	0.24251					8	4	3	0	0	0	2.3239	1	10091	10091		1.6526	1.1943	1	300610	+		12503	15661	6291	6320	15138	15138					0.06942428016247959
KAPDFVFYA	9	Unmodified	_KAPDFVFYA_					0	0	0		EZR-PARP3|1|fusion;ENSG00000092820|ENST00000367075|EZR;nc|ENSG00000137710|P35241-4|RDX;ENSG00000147065|ENST00000360270|MSN;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000137710|P35241-5|RDX	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2703735232353	2	529.271293	1056.52803	0.92188	0.00048793	-3.3206	-0.0017575	-2.3987	-0.0012696	529.2693969292885	51.791	0.47721	53.187	52.95	53.428	1.3966					36	16	3	0	0	0	0.086433	2	21704	21660;21704		53.833	15.859	1	7446600			12504	7580	6292	6321	15139;15140	15140					0.002029555572789832
KAPDFVFYA	9	Unmodified	_KAPDFVFYA_					0	0	0		EZR-PARP3|1|fusion;ENSG00000092820|ENST00000367075|EZR;nc|ENSG00000137710|P35241-4|RDX;ENSG00000147065|ENST00000360270|MSN;ENSG00000137710|ENST00000645495|RDX;nc|ENSG00000137710|P35241-5|RDX	EZR-PARP3|1|fusion	EZR-PARP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2697021365166	2	529.271293	1056.52803	0.17272	9.1417E-05	-3.0419	-0.00161	-2.8692	-0.0015186	529.2695574125715	51.155	0.46187	53.13	52.967	53.429	1.9753					40	18	3	0	0	0	0.063746	2	21431	21431;21469		62.573	30.267	1	8433800			12505	7580	6292	6321	15141;15142	15141					0.002029555572789832
KAPEPPKTDK	10	Unmodified	_KAPEPPKTDK_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8092529177666	2	555.811313	1109.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.21	1	10.21	9.7101	10.71	0								0	0	0	0.65836	1	4209	4209		6.7232	0	1				12506	4700	6293	6322	15143	15143					0.05765397160462271
KAPEPPKTDK	10	Unmodified	_KAPEPPKTDK_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8105956912041	2	555.811313	1109.60807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9411	1	10.592	10.092	11.092	0.65058								0	0	0	0.65836	1	4135	4135		6.7232	0	1				12507	4700	6293	6322	15144	15144					0.05765397160462271
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2551452517509	3	389.253376	1164.7383	-0.58872	-0.00022916	3.2655	0.0012711	2.6768	0.0010419	389.2553132111387	29.438	0.46121	29.438	29.178	29.64	0					65	14	6	0	0	0	0.89588	1	12325	12325		1.9064	0.1641	1	196810000	+		12508	11506	6294	6323	15145	15145					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2546874880791	3	389.253376	1164.7383	1.0572	0.00041153	1.6635	0.00064751	2.7207	0.001059	389.25439086783496	28.843	0.67502	29.122	28.705	29.38	0.2793					85	21	6	0	0	0	0.89588	1	12122	12122		1.9064	0.25375	1	155380000	+		12509	11506	6294	6323	15146	15146					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2543212771416	3	389.253376	1164.7383	1.0817	0.00042104	1.3487	0.00052498	2.4303	0.00094602	389.2541690215735	29.295	0.78933	29.574	29.32	30.109	0.2793					99	25	5	0	0	0	0.89803	1	12200	12200		0.77653	0.078866	1	111390000	+		12510	11506	6294	6323	15147	15147					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.8810912966728	2	583.376426	1164.7383	0.97617	0.00056947	2.2861	0.0013337	3.2623	0.0019031	583.3776989755997	29.295	0.48449	29.574	29.38	29.865	0.2793					29	15	3	0	0	0	0.89803	1	12207	12207		0.45834	0	1	3020900	+		12511	11506	6294	6323	15148	15148					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2546569705009	3	389.253376	1164.7383	0.45457	0.00017694	1.7895	0.00069655	2.244	0.00087349	389.2543169535766	27.578	0.46328	28.857	28.565	29.029	1.2789					71	14	6	0	0	0	0.89588	2	11571	11532;11571		1.9064	0.25375	1	118660000	+		12512	11506	6294	6323	15149;15150	15150					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2542907595634	3	389.253376	1164.7383	0.41105	0.00016	1.6061	0.00062519	2.0172	0.00078519	389.2542152853662	28.011	0.82339	29.29	29.029	29.852	1.2789					100	26	5	0	0	0	0.89803	1	11689	11689		0.77653	0.078866	1	138770000	+		12513	11506	6294	6323	15151	15151					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2542907595634	3	389.253376	1164.7383	0.20055	7.8065E-05	2.1715	0.00084525	2.372	0.00092332	389.254251958102	29.959	0.52049	31.241	31.012	31.532	1.2825					67	16	5	0	0	0	0.89588	1	12537	12537		1.9064	0.9441	1	79085000	+		12514	11506	6294	6323	15152	15152					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2545043826103	3	389.253376	1164.7383	0.4869	0.00018953	1.5237	0.00059309	2.0106	0.00078262	389.2543484782578	26.919	0.39752	28.666	28.468	28.865	1.747					57	12	6	0	0	0	0.89803	2	11291	11291;11330		0.77653	0.50751	1	126560000	+		12515	11506	6294	6323	15153;15154	15153					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2538940310478	3	389.253376	1164.7383	0.58944	0.00022944	0.73391	0.00028568	1.3234	0.00051512	389.25366376432305	29.512	0.45564	31.31	31.082	31.538	1.7987					59	14	5	0	0	0	0.89588	1	12434	12434		1.9064	1.9064	1	79877000	+		12516	11506	6294	6323	15155	15155					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2536804080009	3	389.253376	1164.7383	0.60492	0.00023547	0.65887	0.00025647	1.2638	0.00049194	389.2536565026354	30.03	1.0198	31.845	31.523	32.543	1.8151					98	32	5	0	0	0	0.89588	2	12513	12474;12513		1.9064	1.9064	1	68155000	+		12517	11506	6294	6323	15156;15157	15157					0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	389.253376	1164.7383	1.1906	0.00046343	1.4524	0.00056534	2.6429	0.0010288	389.2539568620091	31.263	0.48619	31.554	31.33	31.816	0.29086	0.18577	0.00011662	NaN	1.9064	67	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54927000	+		12518	11506	6294	6323							0.16252037950107479
KAPVKLLFLH	10	Unmodified	_KAPVKLLFLH_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	389.253376	1164.7383	0.20055	7.8065E-05	2.1715	0.00084525	2.372	0.00092332	389.254251958102	29.959	0.52049	31.241	31.012	31.532	1.2825	-0.12755	0.00095637	NaN	1.9064	67	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79085000	+		12519	11506	6294	6323							0.16252037950107479
KAQKWVVEMED	11	Unmodified	_KAQKWVVEMED_					0	0	0			REV__tr|A0A553SHI6|A0A553SHI6_NIACIDUF348domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12955PE=4SV=1	REV__tr|A0A553SHI6|A0A553SHI6_NIACIDUF348domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12955PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	454.2870361208916	3	454.895589	1361.66494	2.3082	0.00105	-3.5851	-0.0016309	-1.2769	-0.00058086	455.2278657973738	83.5	0.98445	83.5	82.953	83.937	0					46	31	2	0	0	0	0.14606	1	34810	34810		1.4551	0.75745	1	750280	+		12520	14798	6295	6324	15158	15158					-0.0014292334533365647
KAQNILII	8	Unmodified	_KAQNILII_					0	0	0			REV__tr|A0A7D6ZX58|A0A7D6ZX58_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20895PE=4SV=1	REV__tr|A0A7D6ZX58|A0A7D6ZX58_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	912.5915405154228	1	912.587679	911.580402	2.8143	0.0025683	0.84208	0.00076847	3.6564	0.0033368	912.588685303594	109.23	0.18741	109.28	109.17	109.36	0.048843					16	7	3	0	0	0	0.89185	1	47092	47092		0	0	1	12096000	+		12521	15756	6296	6325	15159	15159					0.1210753869090695
KAREPRLRVS	10	Unmodified	_KAREPRLRVS_					0	0	0		ENST00000469302.1_1_13:113140309-113144032:-|nuORF;ENSG00000126216|ENST00000261965|TUBGCP3	ENST00000469302.1_1_13:113140309-113144032:-|nuORF	ENST00000469302.1_1_13:113140309-113144032:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2123901247978	2	606.370195	1210.72584	2.5372	0.0015385	-1.1256	-0.00068252	1.4117	0.00085599	606.3692647229296	91.064	0.32465	91.273	90.997	91.321	0.20904					12	9	2	0	0	0	0.12557	1	38053	38053		1.3295	0.72803	1	456090			12522	2302	6297	6326	15160	15160					0.12890394539772387
KARGCGGG	8	Unmodified	_KARGCGGG_					0	0	0			REV__ENSG00000138136|ENST00000370193|LBX1	REV__ENSG00000138136|ENST00000370193|LBX1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	353.1993896365166	2	353.176672	704.338792	-0.037029	-1.3078E-05	1.1829	0.00041779	1.1459	0.00040471	353.1769204696934	14.383	1.0287	14.496	14.385	15.414	0.11295					54	32	2	0	0	0	2.3239	1	6154	6154		0.69038	0	1	985210	+		12523	10046	6298	6327	15161	15161					-0.025203952170159027
KARGCGGG	8	Unmodified	_KARGCGGG_					0	0	0			REV__ENSG00000138136|ENST00000370193|LBX1	REV__ENSG00000138136|ENST00000370193|LBX1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	353.1996642947197	2	353.176672	704.338792	-1.234	-0.00043583	2.0888	0.0007377	0.85474	0.00030187	353.177410633528	13.869	0.80721	14.595	14.472	15.279	0.72639					45	31	2	0	0	0	2.3239	1	5939	5939		0.69038	0	1	605700	+		12524	10046	6298	6327	15162	15162					-0.025203952170159027
KARGCGGG	8	Unmodified	_KARGCGGG_					0	0	0			REV__ENSG00000138136|ENST00000370193|LBX1	REV__ENSG00000138136|ENST00000370193|LBX1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	353.176672	704.338792	-0.26736	-9.4425E-05	1.3815	0.00048791	1.1141	0.00039348	353.1770297884589	13.651	0.6425	14.479	14.317	14.96	0.82788	-0.044334	-9.6663E-05	NaN	0.69038	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266890	+		12525	10046	6298	6327							-0.025203952170159027
KARLLAGRA	9	Unmodified	_KARLLAGRA_					0	0	0		ENSG00000186994|ENST00000330915|KANK3;nc|ENSG00000186994|Q6NY19-1|KANK3	ENSG00000186994|ENST00000330915|KANK3	ENSG00000186994|ENST00000330915|KANK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	319.2097656130791	3	319.210171	954.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.522	1	59.94	59.44	60.44	1.4181								0	0	0	0.42693	1	24536	24536		1.0715	0	1				12526	4812	6299	6328	15163	15163					0.12956281390836466
KARWVHILRR	10	Unmodified	_KARWVHILRR_					0	0	0		nc|ENSG00000183914|Q9P225-2|DNAH2;ENSG00000183914|ENST00000572933|DNAH2;DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	334.0351440310478	4	334.462462	1333.82074	-1.5351	-0.00051344	-1.7957	-0.00060059	-3.3308	-0.001114	334.4613142226168	52.823	0.4094	52.823	52.572	52.981	0					19	12	2	0	0	0	0.12561	1	21980	21980		0.15932	0.01943	1	338960			12527	4675;7946	6300	6329	15164	15164					0.16718372801619807
KATKAKSKK	9	Unmodified	_KATKAKSKK_					0	0	0		ENSG00000147155|ENST00000495186|EBP	ENSG00000147155|ENST00000495186|EBP	ENSG00000147155|ENST00000495186|EBP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	495.7957641482353	2	495.326934	988.639314	1.3812	0.00068415	-1.5485	-0.000767	-0.16725	-8.2844E-05	495.32412258005	67.322	0.45869	69.192	69.09	69.549	1.87					16	14	2	0	0	0	0.11908	1	28227	28227		0.52476	0	1	303290			12528	3173	6301	6330	15165	15165					0.14454014985233243
KATKRFRRKR	10	Unmodified	_KATKRFRRKR_					0	0	0			REV__ENSG00000178913|ENST00000313368|TAF7	REV__ENSG00000178913|ENST00000313368|TAF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	449.6262695193291	3	449.624978	1345.8531	3.4346	0.0015443	-0.067524	-3.036E-05	3.3671	0.0015139	449.62481947714537	95.147	0.29643	95.549	95.385	95.681	0.40208					26	12	3	0	0	0	0.8974	1	40044	40044		1.7423	0.52744	1	2012900	+		12529	11260	6302	6331	15166	15166					0.19401160204620282
KATKRKGN	8	Unmodified	_KATKRKGN_					0	0	0			REV__ENSG00000233024|ENST00000427999|NPIPA9;REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	REV__ENSG00000233024|ENST00000427999|NPIPA9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.7820617556572	2	451.780151	901.545748	2.1958	0.00099202	1.0956	0.00049497	3.2914	0.001487	451.7806120564948	67.995	0.50943	68.318	68.057	68.566	0.32269					28	15	2	0	0	0	0.88587	1	28410	28410		5.2307	0	1	1161000	+		12530	11392;13716	6303	6332	15167	15167					0.09103715602805096
KATRKFPP	8	Unmodified	_KATRKFPP_					0	0	0			REV__ENST00000585075.1_1_17:73267828-73268089:+|nuORF	REV__ENST00000585075.1_1_17:73267828-73268089:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7124511599541	3	315.527388	943.560336	0.25671	8.1E-05	1.0999	0.00034704	1.3566	0.00042804	315.52783652726106	26.703	0.36475	26.964	26.744	27.108	0.26173					22	11	3	0	0	0	2.3239	1	11199	11199		3.2813	1.4371	1	620200	+		12531	14016	6304	6333	15168	15168					0.08629787750942342
KAVARTAR	8	Unmodified	_KAVARTAR_					0	0	0		IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant;ENSG00000168264|ENST00000366609|IRF2BP2	IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant	IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	436.7751953005791	2	436.774868	871.535184	1.2841	0.00056085	-1.0969	-0.00047909	0.18719	8.1758E-05	436.7744327057761	73.507	1.4681	73.507	73.153	74.621	0					113	46	5	0	0	0	0.89181	1	30568	30568		0.6015	0	1	353690000			12532	4025	6305	6334	15169	15169					0.0942773294835888
KAVARTAR	8	Unmodified	_KAVARTAR_					0	0	0		IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant;ENSG00000168264|ENST00000366609|IRF2BP2	IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant	IRF2BP2|p.P414Ffs*4|1|0.12|ENSG00000168264|chr1:234607661-234607662|-/AAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7758666872978	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89051	1	30552	30552		2.3027	0	1	532050000			12533	4025	6305	6334	15170	15170					0.0942773294835888
KAVGHPFVIQL	11	Unmodified	_KAVGHPFVIQL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	403.5772277712822	3	403.576519	1207.70773	2.2797	0.00092002	-0.40063	-0.00016168	1.879	0.00075833	403.5764096053347	44.737	0.4692	46.103	45.9	46.369	1.3653					45	14	4	0	0	0	0.42228	3	18753	18709;18753;18792		16.275	8.6656	1	15975000			12534	1035	6306	6335	15171;15172;15173	15172					0.11218259565089284
KAVGHPFVIQL	11	Unmodified	_KAVGHPFVIQL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.8627807497978	2	604.861141	1207.70773	2.6492	0.0016024	-0.41289	-0.00024974	2.2363	0.0013526	604.8615356341921	44.744	0.40586	46.11	45.931	46.337	1.3653					30	12	3	0	0	0	0.03983	2	18781	18730;18781		70.332	20.436	1	3559600			12535	1035	6306	6335	15174;15175	15175					0.11218259565089284
KAVGHPFVIQL	11	Unmodified	_KAVGHPFVIQL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	403.5777160525322	3	403.576519	1207.70773	2.1467	0.00086634	-0.39682	-0.00016015	1.7498	0.0007062	403.57637731191403	44.1	0.44028	46.044	45.831	46.271	1.9438					48	13	5	0	0	0	0.77451	2	18439	18439;18501		9.2438	4.3468	1	11160000			12536	1035	6306	6335	15176;15177	15176					0.11218259565089284
KAVGHPFVIQL	11	Unmodified	_KAVGHPFVIQL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.8628417849541	2	604.861141	1207.70773	2.292	0.0013864	0.8269	0.00050016	3.1189	0.0018865	604.8617361323497	44.068	0.37659	46.012	45.831	46.208	1.9438					26	11	3	0	0	0	0.10188	2	18506	18455;18506		55.503	13.663	1	3302400			12537	1035	6306	6335	15178;15179	15179					0.11218259565089284
KAVGHPFVIQL	11	Unmodified	_KAVGHPFVIQL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	403.576519	1207.70773	2.1467	0.00086634	-0.39682	-0.00016015	1.7498	0.0007062	403.57637731191403	44.1	0.44028	46.044	45.831	46.271	1.9438	-0.029294	1.8478E-06	NaN	16.275	48	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11160000			12538	1035	6306	6335							0.11218259565089284
KAVIRLRR	8	Unmodified	_KAVIRLRR_					0	0	0			REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.3418762087822	3	337.901449	1010.68252	1.8972	0.00064105	-0.20171	-6.8158E-05	1.6954	0.00057289	337.9003123578558	113.77	0.90182	113.94	113.59	114.5	0.17578					39	27	2	0	0	0	2.3239	1	49208	49208		0	0	1	277680	+		12539	15934	6307	6336	15180	15180					0.17760249553168705
KAVIRLRR	8	Unmodified	_KAVIRLRR_					0	0	0			REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	337.901449	1010.68252	2.7165	0.00091792	-0.37301	-0.00012604	2.3435	0.00079188	337.9004409382959	113.8	0.811	113.95	113.41	114.22	0.14912	0.0023325	-7.6945E-05	NaN	0	32	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234430	+		12540	15934	6307	6336							0.17760249553168705
KAVIRLRRGHV	11	Unmodified	_KAVIRLRRGHV_					0	0	0			REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	327.0087768435478	4	326.965103	1303.83131	1.0353	0.00033851	0.51573	0.00016862	1.551	0.00050713	326.96533242879224	47.2	0.63926	48.583	48.283	48.922	1.3825					31	19	2	0	0	0	0.14606	1	19699	19699		0.50596	0.23694	1	964890	+		12541	15934	6308	6337	15181	15181					0.1915435545604396
KAVIRLRRGHV	11	Unmodified	_KAVIRLRRGHV_					0	0	0			REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	434.8830749392509	3	435.617712	1303.83131	2.6076	0.0011359	-1.2245	-0.00053343	1.383	0.00060248	435.95157586277566	47.678	0.49369	49.654	49.311	49.805	1.976					22	15	2	0	0	0	0.14606	1	19929	19929		0.50596	0.051438	1	780440	+		12542	15934	6308	6337	15182	15182					0.1915435545604396
KAVIRLRRGHV	11	Unmodified	_KAVIRLRRGHV_					0	0	0			REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	REV__VPS13A|p.E3131V|1|0.14|ENSG00000197969|chr9:77405980-77405980|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	435.617712	1303.83131	1.85	0.00080591	-1.0223	-0.00044533	0.82773	0.00036057	435.6172949607577	48.382	0.5909	49.77	49.365	49.956	1.388	0.058152	0.00016371	NaN	0.50596	20	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830700	+		12543	15934	6308	6337							0.1915435545604396
KAWFDYLGKY	10	Unmodified	_KAWFDYLGKY_					0	0	0		ENST00000486564.5_1_2:31133891-31178528:-|nuORF;nc|ENSG00000158089|Q96FL9-2|GALNT14;nc|ENSG00000158089|Q96FL9-4|GALNT14;ENSG00000158089|ENST00000349752|GALNT14;nc|ENSG00000158089|Q96FL9-3|GALNT14	ENST00000486564.5_1_2:31133891-31178528:-|nuORF	ENST00000486564.5_1_2:31133891-31178528:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884155154228	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9057	1	8.5328	8.0328	9.0328	0.62713								0	0	0	0.66254	1	3273	3273		0.15932	0	1				12544	3491	6309	6338	15183	15183					0.011222740571838585
KAYELALYL	9	Unmodified	_KAYELALYL_					0	0	0		ENST00000497060.1_1_3:149683956-149686189:-|nuORF;ENST00000239940.11_1_3:149683956-149684166:-|nuORF;nc|ENSG00000070087|P35080-2|PFN2	ENST00000497060.1_1_3:149683956-149686189:-|nuORF	ENST00000497060.1_1_3:149683956-149686189:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3107177615166	2	542.307875	1082.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.504	1	63.461	62.961	63.961	1.9571								0	0	0	0.04337	1	25807	25807		45.7	11.298	1				12545	5563	6310	6339	15184	15184					0.06320084279900584
KCFLATVGPF	10	Unmodified	_KCFLATVGPF_					0	0	0			REV__nc|ENSG00000153029|Q95460-2|MR1	REV__nc|ENSG00000153029|Q95460-2|MR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7995483279228	2	541.788795	1081.56304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.756	1	63.173	62.673	63.673	1.4177								0	0	0	0.52953	1	25901	25901		24.021	2.2739	1		+		12546	10439	6311	6340	15185	15185					0.02551875093581657
KCHKDHMDK	9	Unmodified	_KCHKDHMDK_					0	0	0		ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5105773806572	3	381.179554	1140.51683	0.37465	0.00014281	-4.3791	-0.0016692	-4.0044	-0.0015264	381.51083065523346	25.495	0.61031	27.212	26.758	27.368	1.7167					29	19	2	0	0	0	0.75101	1	10658	10658		5.2969	0.76802	1	811870			12547	2609	6312	6341	15186	15186					-0.04780513080163473
KCLARQYR	8	Unmodified	_KCLARQYR_					0	0	0			REV__ENSG00000148291|ENST00000371964|SURF2	REV__ENSG00000148291|ENST00000371964|SURF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.7087890505791	3	346.527282	1036.56002	1.1513	0.00039896	-1.0545	-0.00036543	0.096762	3.3531E-05	346.5270156048872	68.444	0.34229	68.766	68.534	68.876	0.32224					16	10	2	0	0	0	2.3239	1	28564	28564		0.40072	0	1	596430	+		12548	10340	6313	6342	15187	15187					0.043200447594244906
KCLLSPVVLA	10	Unmodified	_KCLLSPVVLA_					0	0	0		nc|ENSG00000168229|Q13258-2|PTGDR;ENSG00000168229|ENST00000306051|PTGDR	nc|ENSG00000168229|Q13258-2|PTGDR	nc|ENSG00000168229|Q13258-2|PTGDR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	347.5468322634697	3	348.215822	1041.62564	1.3984	0.00048695	-0.95263	-0.00033172	0.44578	0.00015523	348.215229199115	41.486	0.18378	43.379	43.325	43.508	1.8927					9	5	2	0	0	0	0.12547	1	17393	17393		1.9064	0	1	474500			12549	4020	6314	6343	15188	15188					0.10649021161793826
KCPISSLTLE	10	Unmodified	_KCPISSLTLE_					0	0	0		ENST00000392981.6_1_3:142051903-142066093:-|nuORF	ENST00000392981.6_1_3:142051903-142066093:-|nuORF	ENST00000392981.6_1_3:142051903-142066093:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	364.1978027224541	3	364.198609	1089.574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.641	1	99.641	99.141	100.14	0								0	0	0	0.66176	1	41708	41708		0.62683	0.16849	1				12550	6265	6315	6344	15189	15189					0.03279232677186883
KCPNADLKP	9	Unmodified	_KCPNADLKP_					0	0	0		ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	ENSG00000138356|ENST00000374700|AOX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	329.1760131716728	3	329.176027	984.506251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.5	1	103.56	103.06	104.06	0.059502								0	0	0	0.42693	1	43426	43426		0.23584	0	1				12551	2826	6316	6345	15190	15190					0.013378275370428128
KCRVQALR	8	Unmodified	_KCRVQALR_					0	0	0		ENST00000502781.5_1_4:147097109-147097235:+|nuORF	ENST00000502781.5_1_4:147097109-147097235:+|nuORF	ENST00000502781.5_1_4:147097109-147097235:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2924072146416	2	487.289828	972.565103	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.969	1	80.269	79.769	80.769	0.30047								0	0	0	1.0178	1	33431	33431		2.5775	0	1				12552	6982	6317	6346	15191	15191					0.07772348622063419
KCSLYILI	8	Unmodified	_KCSLYILI_					0	0	0			REV__nc|ENSG00000133433|P0CG29|GSTT2	REV__nc|ENSG00000133433|P0CG29|GSTT2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1915466189384	3	318.189385	951.546325	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.025	1	93.193	92.693	93.693	0.16835								0	0	0	1.0178	1	38950	38950		1.4819	1.0236	1		+		12553	9876	6318	6347	15192	15192					0.06861374207653625
KCVKRITKM	9	Unmodified	_KCVKRITKM_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8295776247978	2	553.830472	1105.64639	1.2785	0.00070807	-0.01109	-6.1418E-06	1.2674	0.00070193	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.83753	2	30573	30573;30678		1.8442	0.51471	1	6275300			12554	16438	6319	6348	15193;15194	15193					0.09779288269783137
KCVKRITKM	9	Unmodified	_KCVKRITKM_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8309814333916	2	553.830472	1105.64639	1.9187	0.0010627	-0.037027	-2.0507E-05	1.8817	0.0010421	553.8302104494187	72.464	2.1267	72.789	71.785	73.912	0.32494					193	67	4	0	0	0	0.83753	3	30450	30450;30554;30656		1.8442	0.51471	1	7300500			12555	16438	6319	6348	15195;15196;15197	15195					0.09779288269783137
KCVKRITKM	9	Unmodified	_KCVKRITKM_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8311035037041	2	553.830472	1105.64639	2.4367	0.0013495	-0.52818	-0.00029252	1.9085	0.001057	553.8300287508691	73.86	1.3555	74.185	73.912	75.267	0.32494					102	42	3	0	0	0	0.83753	1	31022	31022		1.8442	0.51471	1	2448400			12556	16438	6319	6348	15198	15198					0.09779288269783137
KCVKRITKM	9	Unmodified	_KCVKRITKM_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8315307497978	2	553.830472	1105.64639	2.0306	0.0011246	-0.33104	-0.00018334	1.6996	0.00094127	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.83753	1	30405	30405		1.8442	0	1	7375800			12557	16438	6319	6348	15199	15199					0.09779288269783137
KCVKRITKM	9	Unmodified	_KCVKRITKM_					0	0	0		tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	tr|A0A553SNX0|A0A553SNX0_NIACIIsoprenyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25335PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8304931521416	2	553.830472	1105.64639	1.5125	0.00083768	-0.017938	-9.9345E-06	1.4946	0.00082774	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.83753	1	29968	29968		1.8442	0	1	5931400			12558	16438	6319	6348	15200	15200					0.09779288269783137
KDDSPDLPK	9	Unmodified	_KDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.8415710330009	3	338.84159	1013.50294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.996	1	12.996	12.496	13.496	0								0	0	0	0.14135	1	5383	5383		30.431	18.257	1			+	12559	341	6320	6349	15201	15201					-0.003271440359526423
KDDSPDLPK	9	Unmodified	_KDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.8418151736259	3	338.84159	1013.50294	-1.4375	-0.00048709	2.3629	0.00080064	0.92536	0.00031355	338.84215459905516	12.549	0.23949	13.243	13.137	13.377	0.69396					10	7	2	0	0	0	0.5951	1	5219	5219		11.518	4.8875	1	288230		+	12560	341	6320	6349	15202	15202					-0.003271440359526423
KDDSPDLPK	9	Unmodified	_KDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	338.84159	1013.50294	-0.29981	-0.00010159	1.3251	0.000449	1.0253	0.00034741	338.8418530622107	12.943	0.24743	13.042	12.875	13.122	0.09944	-0.10027	-0.00052505	NaN	11.518	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232880		+	12561	341	6320	6349							-0.003271440359526423
KDDYMESGTK	10	Unmodified	_KDDYMESGTK_					0	0	0		nc|ENSG00000126500|Q9NZU1-1|FLRT1;ENSG00000126500|ENST00000682287|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	nc|ENSG00000126500|Q9NZU1-1|FLRT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2844421267509	3	391.841261	1172.50195	0.2059	8.0679E-05	-2.209	-0.00086557	-2.0031	-0.00078489	392.1735365385244	19.865	0.18912	20.923	20.794	20.983	1.0585					7	5	2	0	0	0	0.12551	1	8267	8267		3.3196	0	1	125270			12562	2309	6321	6350	15203	15203					-0.07739726467184482
KDFHSEYI	8	Unmodified	_KDFHSEYI_					0	0	0		ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	520.2828857302666	2	519.748182	1037.48181	2.5368	0.0013185	1.5931	0.00082801	4.1299	0.0021465	519.7494744214652	49.845	0.43907	51.236	50.98	51.419	1.3911					20	13	2	0	0	0	2.3239	1	20891	20891		14.582	2.0501	1	651320			12563	1053	6322	6351	15204	15204					-0.03543109344809636
KDHNYSLEH	9	Unmodified	_KDHNYSLEH_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119201540947	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.128	1	25.128	24.628	25.628	0								0	0	0	0.32083	1	10486	10486		16.566	0	1				12564	973	6323	6352	15205	15205					-0.04986107572926812
KDHNYSLEH	9	Unmodified	_KDHNYSLEH_					0	0	0		nc|ENSG00000078177|Q86UW6-2|N4BP2;ENSG00000078177|ENST00000261435|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	nc|ENSG00000078177|Q86UW6-2|N4BP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.1811401247978	3	381.512355	1141.51524	-0.42719	-0.00016298	-1.5383	-0.00058686	-1.9654	-0.00074984	381.5120843403889	38.698	0.66335	38.698	38.602	39.265	0					41	24	2	0	0	0	0.11685	1	16447	16447		9.544	0.56773	1	2141400			12565	973	6323	6352	15206	15206					-0.04986107572926812
KDHSHTPWIVI	11	Unmodified	_KDHSHTPWIVI_					0	0	0		ENST00000567743.5_1_16:66851261-66857485:-|nuORF;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-2|NAE1;ENSG00000159593|ENST00000290810|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	ENST00000567743.5_1_16:66851261-66857485:-|nuORF	ENST00000567743.5_1_16:66851261-66857485:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	666.8579589724541	2	666.856586	1331.69862	1.7967	0.0011981	-2.6895	-0.0017935	-0.89276	-0.00059534	666.854043008314	84.682	0.30898	85.841	85.655	85.964	1.159					16	9	2	0	0	0	0.50855	1	35513	35513		23.79	2.0431	1	1993500			12566	3534	6324	6353	15207	15207					0.04603866208731233
KDHSHTPWIVI	11	Unmodified	_KDHSHTPWIVI_					0	0	0		ENST00000567743.5_1_16:66851261-66857485:-|nuORF;nc|ENSG00000159593|Q13564-3|NAE1;nc|ENSG00000159593|Q13564-2|NAE1;ENSG00000159593|ENST00000290810|NAE1;nc|ENSG00000159593|Q13564-4|NAE1	ENST00000567743.5_1_16:66851261-66857485:-|nuORF	ENST00000567743.5_1_16:66851261-66857485:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	666.856586	1331.69862	1.9228	0.0012822	-1.9273	-0.0012853	-0.0045683	-3.0464E-06	666.8548437268535	84.139	0.27527	85.777	85.685	85.96	1.6379	-0.032288	0.0004226	NaN	23.79	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2201800			12567	3534	6324	6353							0.04603866208731233
KDISEVVTPR	10	Unmodified	_KDISEVVTPR_					0	0	0		ENSG00000243649|ENST00000425368|CFB;ENST00000482312.1_1_6:31918808-31919804:+|nuORF	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	572.7814208865166	2	572.322045	1142.62954	1.6926	0.00096871	-2.2293	-0.0012759	-0.53668	-0.00030715	572.3208542374372	49.96	0.21912	51.938	51.788	52.007	1.9772					13	6	3	0	0	0	0.12458	1	20907	20907		7.609	0	1	692800			12568	5353	6325	6354	15208	15208					0.06392782189163881
KDLCAALW	8	Unmodified	_KDLCAALW_					0	0	0		ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	460.2386352419853	2	460.238938	918.463324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.383	1	35.658	35.158	36.158	1.2746								0	0	0	1.0178	1	14433	14433		4.3292	0	1				12569	5179	6326	6355	15209	15209					0.0008305747961685483
KDLKLPRLHVK	11	Unmodified	_KDLKLPRLHVK_					0	0	0			REV__ENST00000557444.5_1_16:90057772-90063225:+|nuORF	REV__ENST00000557444.5_1_16:90057772-90063225:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.6294433474541	3	449.625873	1345.85579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.49	1	95.911	95.411	96.411	0.4212								0	0	0	0.63775	1	40187	40187		0.094841	0	1		+		12570	13176	6327	6356	15210	15210					0.19669570818905413
KDLLRIREKFL	11	Unmodified	_KDLLRIREKFL_					0	0	0			REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	715.7646362185478	2	715.945736	1429.87692	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.656	1	98.912	98.412	99.412	0.25636								0	0	0	0.63775	1	41520	41520		4.897	3.5675	1		+		12571	8450	6328	6357	15211	15211					0.1791753612778848
KDLRERPLAAP	11	Unmodified	_KDLRERPLAAP_					0	0	0			REV__ENST00000543087.5_1_11:18512432-18536353:-|nuORF	REV__ENST00000543087.5_1_11:18512432-18536353:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3704711794853	2	633.369861	1264.72517	1.9685	0.0012468	-1.3782	-0.00087293	0.59024	0.00037384	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	1.0366	1	33961	33961		1.1933	0.66858	1	7751600	+		12572	13792	6329	6358	15212	15212					0.10339555100085818
KDLRRWLRRLH	11	Unmodified	_KDLRRWLRRLH_					0	0	0		tr|A0A7D6VSU0|A0A7D6VSU0_9CLOTSulfate/molybdateABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14165PE=4SV=1	tr|A0A7D6VSU0|A0A7D6VSU0_9CLOTSulfate/molybdateABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14165PE=4SV=1	tr|A0A7D6VSU0|A0A7D6VSU0_9CLOTSulfate/molybdateABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14165PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2412292361259	4	387.989109	1547.92733	0.54538	0.0002116	3.4149	0.001325	3.9603	0.0015366	388.2409979513042	36.818	0.32742	38.636	38.496	38.824	1.8176					46	20	3	0	0	0	1.0391	1	15416	15416		0.40827	0.31342	1	5380200			12573	16886	6330	6359	15213	15213					0.17528503296125564
KDLVFDIY	8	Unmodified	_KDLVFDIY_					0	0	0		ENST00000541225.5_1_17:66883094-66937097:-|nuORF;nc|ENSG00000141338|O94911-1|ABCA8;ENSG00000141338|ENST00000586539|ABCA8	ENST00000541225.5_1_17:66883094-66937097:-|nuORF	ENST00000541225.5_1_17:66883094-66937097:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7727233767509	2	506.771126	1011.5277	2.2308	0.0011305	0.219	0.00011098	2.4498	0.0012415	506.77130275742985	67.733	0.79601	69.111	68.757	69.553	1.3778					83	25	4	0	0	0	0.71791	1	28329	28329		28.487	2.1456	1	126920000			12574	2953	6331	6360	15214	15214					0.022395358374069474
KDLYPLIKLVW	11	Unmodified	_KDLYPLIKLVW_					0	0	0			REV__nc|ENSG00000137812|Q8NG31-3|KNL1	REV__nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4233886599541	2	694.421031	1386.82751	2.5051	0.0017396	0.56303	0.00039098	3.0682	0.0021306	694.4215105236693	85.212	1.1922	85.464	84.814	86.006	0.25227					78	37	3	0	0	0	1.0131	1	35716	35716		2.9952	1.8019	1	3998800	+		12575	10030	6332	6361	15215	15215					0.1495682811896586
KDLYPLIKLVW	11	Unmodified	_KDLYPLIKLVW_					0	0	0			REV__nc|ENSG00000137812|Q8NG31-3|KNL1	REV__nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	694.4243652224541	2	694.421031	1386.82751	1.5588	0.0010825	1.7425	0.00121	3.3013	0.0022925	694.4221814776873	84.235	1.1503	85.831	85.338	86.488	1.5962					62	37	2	0	0	0	1.0131	1	35455	35455		2.9952	1.6657	1	5297400	+		12576	10030	6332	6361	15216	15216					0.1495682811896586
KDNHALVR	8	Unmodified	_KDNHALVR_					0	0	0		ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	ENSG00000206181|ENST00000332567|ELOA2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1989623904228	2	476.769783	951.525013	2.2018	0.0010498	-3.0283	-0.0014438	-0.82651	-0.00039405	476.76898641729423	77.674	0.30865	77.674	77.564	77.873	0					14	9	2	0	0	0	2.3239	1	32344	32344		0.69038	0.23204	1	889830			12577	5194	6333	6362	15217	15217					0.047311252231338585
KDQKKHRKK	9	Unmodified	_KDQKKHRKK_					0	0	0		ENSG00000165733|ENST00000374518|BMS1;BMS1|p.G284Dfs*12|1|0.03|ENSG00000165733|chr10:42792563-42792564|-/ACCT|frameshift_variant;ENST00000532854.1_10:47241805-47241907:-|nuORF	ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2529174685478	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.458	1	32.273	31.773	32.773	1.8151								0	0	0	0.42693	1	12768	12768		0.23584	0.076522	1				12578	3855	6334	6363	15218	15218					0.14134698402403956
KDRKDRIKQL	10	Unmodified	_KDRKDRIKQL_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3970825076103	2	650.39641	1298.77827	1.7147	0.0011152	-0.87762	-0.0005708	0.83705	0.00054441	650.3956760346166	77.853	0.76601	79.605	79.32	80.086	1.7514					63	24	3	0	0	0	0.88022	1	32739	32739		3.5965	0	1	1890400	+		12579	11044	6335	6364	15219	15219					0.14082932882729438
KDRKDRIKQL	10	Unmodified	_KDRKDRIKQL_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	650.39641	1298.77827	2.0373	0.001325	-2.4363	-0.0015845	-0.39902	-0.00025952	650.3941568394523	79.314	2.3529	79.314	78.283	80.636	0	-0.1798	-0.0017561	NaN	3.5965	140	75	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2525000	+		12580	11044	6335	6364							0.14082932882729438
KDRLHCPVWH	10	Unmodified	_KDRLHCPVWH_					0	0	0			REV__DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	REV__DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882324099541	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.724	1	10.724	10.224	11.224	0								0	0	0	0.66218	1	4424	4424		0.77653	0	1		+		12581	8428	6336	6365	15220	15220					0.011907902252232816
KDRLHCPVWH	10	Unmodified	_KDRLHCPVWH_					0	0	0			REV__DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	REV__DDC|p.L435W|1|0.19|ENSG00000132437|chr7:50463370-50463370|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887512087822	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.144	1	20.668	20.168	21.168	1.5237								0	0	0	0.66218	1	7959	7959		0.77653	0	1		+		12582	8428	6336	6365	15221	15221					0.011907902252232816
KDRQEKKLKKS	11	Unmodified	_KDRQEKKLKKS_					0	0	0		tr|A0A553SL56|A0A553SL56_NIACIYpzIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20000PE=4SV=1	tr|A0A553SL56|A0A553SL56_NIACIYpzIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20000PE=4SV=1	tr|A0A553SL56|A0A553SL56_NIACIYpzIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20000PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	694.9244262576103	2	694.422625	1386.8307	1.0454	0.00072598	-0.086506	-6.0072E-05	0.95894	0.00066591	694.9233653665473	83.778	0.30651	85.416	85.195	85.501	1.6379					13	9	2	0	0	0	1.0366	1	35140	35140		1.1933	0	1	2295300			12583	16321	6337	6366	15222	15222					0.15275471225686488
KDSIPLIK	8	Unmodified	_KDSIPLIK_					0	0	0			REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.1961242556572	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.012	1	77.306	76.806	77.806	1.2938								0	0	0	1.0178	1	31905	31905		0.45834	0	1		+		12584	15569	6338	6367	15223	15223					0.104638324540133
KDSIPLIK	8	Unmodified	_KDSIPLIK_					0	0	0			REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.1959106326103	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.129	1	77.423	76.923	77.923	1.2938								0	0	0	1.0178	1	31957	31957		0.45834	0	1		+		12585	15569	6338	6367	15224	15224					0.104638324540133
KDSIPLIK	8	Unmodified	_KDSIPLIK_					0	0	0			REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	REV__tr|A0A7D6VZK5|A0A7D6VZK5_9CLOTThreonine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=thrSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.1962158083916	3	305.195416	912.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.248	1	77.542	77.042	78.042	1.2938								0	0	0	1.0178	1	32010	32010		0.45834	0	1		+		12586	15569	6338	6367	15225	15225					0.104638324540133
KDSTVLLIC	9	Unmodified	_KDSTVLLIC_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;C9orf3-HIATL1|3|fusion;C9orf3-HIATL1|4|fusion;nc|ENSG00000148110|Q5SR56-2|MFSD14B;ENSG00000148110|ENST00000375344|MFSD14B	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2796203494072	2	496.27826	990.541968	0.25207	0.0001251	-0.11598	-5.7556E-05	0.1361	6.7543E-05	496.2784872939676	13.963	0.70735	13.963	13.579	14.286	0					38	22	3	0	0	0	0.53525	1	5735	5735		13.906	1.3745	1	1402700			12587	110	6339	6368	15226	15226					0.04631864994064472
KDTFKKMKK	9	Unmodified	_KDTFKKMKK_					0	0	0		L1ME1_dup6617|chr3:129847425-129848424:-|1.095250631527543|0.4453241998369115|1.3|429.0|4|1|sense	L1ME1_dup6617|chr3:129847425-129848424:-|1.095250631527543|0.4453241998369115|1.3|429.0|4|1|sense	L1ME1_dup6617|chr3:129847425-129848424:-|1.095250631527543|0.4453241998369115|1.3|429.0|4|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	385.2315246462822	3	385.230243	1152.6689	2.2222	0.00085606	-1.3016	-0.00050143	0.92058	0.00035463	385.229915230731	60.038	0.73218	60.366	60.123	60.856	0.32809					58	23	3	0	0	0	0.8462	1	25111	25111		1.0715	0.56551	1	2461600			12588	7710	6340	6369	15227	15227					0.09867210939023607
KDVPPVLV	8	Unmodified	_KDVPPVLV_					0	0	0			REV__ENSG00000185156|ENST00000329805|MFSD6L	REV__ENSG00000185156|ENST00000329805|MFSD6L	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7719604372978	2	433.770929	865.527304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.928	1	99.928	99.428	100.43	0								0	0	0	1.0178	1	41832	41832		0.79363	0	1		+		12589	11453	6341	6370	15228	15228					0.08916160908233906
KDVSRAKL	8	Unmodified	_KDVSRAKL_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1907531619072	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.742	1	28.489	27.989	28.989	1.747								0	0	0	1.0178	1	11191	11191		0.45834	0	1				12590	4394	6342	6371	15229	15229					0.08901180025713984
KDVSRAKL	8	Unmodified	_KDVSRAKL_					0	0	0		ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	ENSG00000176102|ENST00000323959|CSTF3	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1912109255791	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.869	1	28.616	28.116	29.116	1.747								0	0	0	1.0178	1	11243	11243		0.45834	0	1				12591	4394	6342	6371	15230	15230					0.08901180025713984
KDVVVLVIL	9	Unmodified	_KDVVVLVIL_					0	0	0		nc|ENSG00000239732|Q9NR96-2|TLR9;nc|ENSG00000239732|Q9NR96-5|TLR9;ENSG00000239732|ENST00000360658|TLR9;nc|ENSG00000239732|Q9NR96-3|TLR9;nc|ENSG00000239732|Q9NR96-4|TLR9;PCBP4-TLR9|1|fusion	nc|ENSG00000239732|Q9NR96-2|TLR9	nc|ENSG00000239732|Q9NR96-2|TLR9	MSMS	GG20161007_CRH_Patient100_A02_01	1	333.2268554568291	3	333.226716	996.658318	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.48	1	104.48	103.98	104.98	0								0	0	0	0.42693	1	44101	44101		0.26902	0	1				12592	5328	6343	6372	15231	15231					0.15985551556275368
KDWFLLRRRRR	11	Unmodified	_KDWFLLRRRRR_					0	0	0			REV__nc|ENSG00000100918|O95072-2|REC8	REV__nc|ENSG00000100918|O95072-2|REC8	MSMS	GG20161007_CRH_Patient100_W632_02	4	801.2670776247978	2	801.484217	1600.95388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.268	1	98.524	98.024	99.024	0.25636								0	0	0	0.63775	1	41350	41350		0.26902	0.26902	1		+		12593	9014	6344	6373	15232	15232					0.17744192187456065
KDWYSHVK	8	Unmodified	_KDWYSHVK_					0	0	0		ENSG00000066422|ENST00000312938|ZBTB11	ENSG00000066422|ENST00000312938|ZBTB11	ENSG00000066422|ENST00000312938|ZBTB11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0696594119072	3	354.85042	1061.52943	-0.19236	-6.826E-05	0.46653	0.00016555	0.27417	9.7288E-05	354.8502851823042	27.829	0.34114	29.108	28.904	29.246	1.2789					21	10	3	0	0	0	2.3239	1	11651	11651		0	0	1	1210200			12594	805	6345	6374	15233	15233					0.0011258964602802735
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5236694216728	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.123	1	28.123	27.623	28.623	0								0	0	0	0.66227	1	11768	11768		0.62683	0.063655	1				12595	1407	6346	6375	15234	15234					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5247680544853	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.493	1	28.493	27.993	28.993	0								0	0	0	0.66227	1	11923	11923		0.62683	0.12087	1				12596	1407	6346	6375	15235	15235					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5242797732353	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.264	1	26.526	26.026	27.026	0.26173								0	0	0	0.66227	1	10975	10975		0.62683	0	1				12597	1407	6346	6375	15236	15236					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5238220095634	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.552	1	27.824	27.324	28.324	0.27119								0	0	0	0.66227	1	11521	11521		0.62683	0.35781	1				12598	1407	6346	6375	15237	15237					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5244933962822	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.236	1	28.507	28.007	29.007	0.27119								0	0	0	0.66227	1	11811	11811		0.62683	0.35781	1				12599	1407	6346	6375	15238	15238					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5245544314384	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.322	1	30.607	30.107	31.107	0.2859								0	0	0	0.66227	1	12708	12708		0.62683	0.12087	1				12600	1407	6346	6375	15239	15239					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5250121951103	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.56	1	30.846	30.346	31.346	0.2859								0	0	0	0.66227	1	12814	12814		0.62683	0.12087	1				12601	1407	6346	6375	15240	15240					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5246154665947	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.562	1	27.833	27.333	28.333	1.2715								0	0	0	0.66227	1	11123	11123		0.62683	0	1				12602	1407	6346	6375	15241	15241					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5244018435478	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.68	1	27.952	27.452	28.452	1.2715								0	0	0	0.66227	1	11173	11173		0.62683	0.35781	1				12603	1407	6346	6375	15242	15242					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5240356326103	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.155	1	28.427	27.927	28.927	1.2715								0	0	0	0.66227	1	11378	11378		0.62683	0.35781	1				12604	1407	6346	6375	15243	15243					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5246459841728	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.034	1	27.751	27.251	28.251	1.7167								0	0	0	0.66227	1	10887	10887		0.62683	0	1				12605	1407	6346	6375	15244	15244					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5240966677666	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.128	1	27.844	27.344	28.344	1.7167								0	0	0	0.66227	1	10926	10926		0.62683	0.35781	1				12606	1407	6346	6375	15245	15245					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5240661501884	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.618	1	28.365	27.865	28.865	1.747								0	0	0	0.66227	1	11137	11137		0.62683	0.35781	1				12607	1407	6346	6375	15246	15246					-0.05110199205614663
KEAKKDDFMC	10	Unmodified	_KEAKKDDFMC_					0	0	0		nc|ENSG00000102935|Q2M1K9-2|ZNF423;nc|ENSG00000102935|Q2M1K9|ZNF423;ENSG00000102935|ENST00000563137|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	nc|ENSG00000102935|Q2M1K9-2|ZNF423	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5247070193291	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.487	1	30.263	29.763	30.763	1.7754								0	0	0	0.66227	1	11929	11929		0.62683	0.063655	1				12608	1407	6346	6375	15247	15247					-0.05110199205614663
KEARWYFYEMK	11	Unmodified	_KEARWYFYEMK_					0	0	0			REV__ENST00000496711.5_1_9:130118742-130126953:+|nuORF	REV__ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.4418517947197	4	388.441969	1549.73877	-1.0686	-0.00041509	-1.3048	-0.00050682	-2.3734	-0.00092192	388.4415362277407	19.31	0.68334	19.31	18.92	19.603	0					79	21	5	0	0	0	1.0369	1	8119	8119		1.1098	0.41209	1	13408000	+		12609	13470	6347	6376	15248	15248					-0.014109551829960765
KEDESDEEMEQ	11	Unmodified	_KEDESDEEMEQ_					0	0	0			REV__SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	REV__SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8420287966728	3	456.841766	1367.50347	0.52467	0.00023969	0.299	0.0001366	0.82367	0.00037629	456.84190627707477	7.5179	2.0624	7.5179	5.9918	8.0542	0					165	86	3	0	0	0	1.0365	1	3069	3069		1.2148	0.10508	1	1515600	+		12610	14668	6348	6377	15249	15249					-0.16558181959726426
KEEIIKEKREI	11	Unmodified	_KEEIIKEKREI_					0	0	0		tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.6208068728447	3	472.280319	1413.81913	3.1183	0.0014727	3.2468	0.0015334	6.3652	0.0030061	472.28123472315633	87.177	1.8927	87.177	86.84	88.732	0					108	67	2	0	0	0	1.0388	1	36942	36942		0.50596	0.051438	1	5550500			12611	16839	6349	6378	15250	15250					0.12877229411719782
KEEMLNQNH	9	Unmodified	_KEEMLNQNH_					0	0	0		ENST00000453185.5_1_1:29522511-29533334:-|nuORF	ENST00000453185.5_1_1:29522511-29533334:-|nuORF	ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5123168826103	3	381.513479	1141.51861	-0.75121	-0.0002866	-2.4514	-0.00093523	-3.2026	-0.0012218	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.57699	1	13086	13086		12.241	0	1	2428000			12612	6626	6350	6379	15251	15251					-0.04649180790556784
KEEVVTVET	9	Unmodified	_KEEVVTVET_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000489040.1_1_11:67351618-67352251:+|nuORF;ENST00000494593.1_1_11:67351834-67352083:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2742187380791	2	517.274229	1032.53391	0.80891	0.00041843	-0.10079	-5.2138E-05	0.70811	0.00036629	517.2742277074299	18.393	0.41657	19.372	19.147	19.564	0.97922					27	15	2	0	0	0	0.081597	1	7677	7677		55.503	7.7541	1	2663900			12613	1049	6351	6380	15252	15252					0.018940092782941065
KEEVVTVET	9	Unmodified	_KEEVVTVET_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000489040.1_1_11:67351618-67352251:+|nuORF;ENST00000494593.1_1_11:67351834-67352083:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2748901247978	2	517.274229	1032.53391	0.49453	0.00025581	0.93605	0.0004842	1.4306	0.00074001	517.2746159568601	17.911	0.37769	19.359	19.175	19.552	1.448					29	12	3	0	0	0	0.03071	1	7448	7448		86.332	8.1825	1	3723300			12614	1049	6351	6380	15253	15253					0.018940092782941065
KEEYWPLEFWK	11	Unmodified	_KEEYWPLEFWK_					0	0	0		ENST00000273047.8_1_3:19988696-19992457:+|nuORF	ENST00000273047.8_1_3:19988696-19992457:+|nuORF	ENST00000273047.8_1_3:19988696-19992457:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1395751833916	3	518.925765	1553.75547	1.0823	0.00056164	-1.9671	-0.0010208	-0.88475	-0.00045912	518.9246977503708	20.484	0.34349	20.484	20.319	20.662	0					21	10	3	0	0	0	0.14606	1	8486	8486		0.36667	0	1	1033800			12615	5682	6352	6381	15254	15254					0.0007386897457308805
KEFLVRTSNL	10	Unmodified	_KEFLVRTSNL_					0	0	0			REV__ENST00000470815.1_1_4:89579601-89591046:+|nuORF	REV__ENST00000470815.1_1_4:89579601-89591046:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.8477050662041	2	603.845687	1205.67682	2.898	0.0017499	-3.6406	-0.0021983	-0.74263	-0.00044843	603.8447321734061	69.771	0.21864	71.609	71.468	71.687	1.8378					15	6	3	0	0	0	0.48044	1	29284	29284		28.495	3.5035	1	1317000	+		12616	10071	6353	6382	15255	15255					0.08221061460199053
KEFYTQNLQL	10	Unmodified	_KEFYTQNLQL_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3394653201103	2	642.335153	1282.65575	2.702	0.0017356	2.1505	0.0013814	4.8526	0.003117	642.3367208050963	64.724	0.46249	66.131	65.894	66.356	1.4071					45	14	4	0	0	0	0.1784	3	27111	27111;27160;27219		51.63	14.431	1	3950500			12617	16516	6354	6383	15256;15257;15258	15256					0.02573051360673162
KEFYTQNLQL	10	Unmodified	_KEFYTQNLQL_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3384887576103	2	642.335153	1282.65575	2.2628	0.0014535	2.5899	0.0016636	4.8528	0.0031171	642.3370011853717	64.258	0.56786	66.186	65.919	66.487	1.928					46	17	4	0	0	0	0.1784	3	26964	26906;26964;27023		51.63	11.391	1	4853900			12618	16516	6354	6383	15259;15260;15261	15260					0.02573051360673162
KEGNGRTIH	9	Unmodified	_KEGNGRTIH_					0	0	0		tr|A0A553SHB5|A0A553SHB5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_12540PE=4SV=1	tr|A0A553SHB5|A0A553SHB5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_12540PE=4SV=1	tr|A0A553SHB5|A0A553SHB5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_12540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7752563357353	2	506.270147	1010.52574	0.71547	0.00036222	2.7931	0.001414	3.5085	0.0017763	506.7749798714977	13.49	0.46331	13.49	13.239	13.702	0					36	14	4	0	0	0	0.46566	1	5550	5550		17.113	0.1706	1	3664100			12619	16145	6355	6384	15262	15262					0.020899198721849643
KEHLEREKEKL	11	Unmodified	_KEHLEREKEKL_					0	0	0			REV__nc|ENSG00000164402|Q92599-3|SEPTIN8	REV__nc|ENSG00000164402|Q92599-3|SEPTIN8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	480.2958862185478	3	480.271935	1437.79398	2.5446	0.0012221	2.399	0.0011521	4.9435	0.0023742	480.6075983245257	49.772	0.6644	51.163	50.98	51.644	1.3911					24	20	2	0	0	0	0.14606	1	21018	21018		17.572	13.726	1	937330	+		12620	10737	6356	6385	15263	15263					0.0925917460913297
KEIEKALKIYY	11	Unmodified	_KEIEKALKIYY_					0	0	0			REV__tr|A0A7D7A1L8|A0A7D7A1L8_9CLOTPyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15885PE=4SV=1	REV__tr|A0A7D7A1L8|A0A7D7A1L8_9CLOTPyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15885PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	699.4106933474541	2	699.405578	1396.7966	2.5356	0.0017734	3.8737	0.0027093	6.4093	0.0044827	699.4080920657195	87.117	1.2908	87.36	87.195	88.486	0.24387					86	43	3	0	0	0	1.0377	1	36575	36575		0.86438	0.46366	1	3164400	+		12621	15829	6357	6386	15264	15264					0.11407630014105052
KEIHEAYAYSK	11	Unmodified	_KEIHEAYAYSK_					0	0	0			REV__tr|A0A7D6VPE2|A0A7D6VPE2_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22725PE=3SV=1	REV__tr|A0A7D6VPE2|A0A7D6VPE2_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22725PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	446.8936035037041	3	446.894465	1337.66157	0.65848	0.00029427	-2.6112	-0.0011669	-1.9527	-0.00087264	446.8935237686593	11.855	0.31301	11.944	11.805	12.118	0.089381					22	9	4	0	0	0	0.76	1	4923	4923		10.016	1.7298	1	25722000	+		12622	15356	6358	6387	15265	15265					0.006241498723056793
KEIKFLQV	8	Unmodified	_KEIKFLQV_					0	0	0		chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8104736208916	2	502.810585	1003.60662	2.0655	0.0010386	-2.2764	-0.0011446	-0.21085	-0.00010602	502.8095495890564	59.787	0.30635	59.787	59.638	59.944	0					22	13	2	0	0	0	0.18674	1	24939	24939		81.89	3.1622	1	4226300			12623	165	6359	6388	15266	15266					0.10495807862378115
KEIKFLQV	8	Unmodified	_KEIKFLQV_					0	0	0		chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.8100463747978	2	502.810585	1003.60662	2.9309	0.0014737	-2.7173	-0.0013663	0.21364	0.00010742	502.8088573775447	59.09	0.28242	59.416	59.301	59.584	0.32554					35	20	2	0	0	0	0.36182	1	24794	24794		62.573	2.4988	1	4503700			12624	165	6359	6388	15267	15267					0.10495807862378115
KEIKFLQV	8	Unmodified	_KEIKFLQV_					0	0	0		chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8113281130791	2	502.810585	1003.60662	0.62604	0.00031478	1.01	0.00050782	1.636	0.0008226	502.81076018670876	57.841	0.27383	59.259	59.101	59.375	1.4181					32	18	2	0	0	0	0.18674	1	24238	24238		81.89	17.93	1	6538500			12625	165	6359	6388	15268	15268					0.10495807862378115
KEIKFLQV	8	Unmodified	_KEIKFLQV_					0	0	0		chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	chr1:173865300-173865471|149|44.32|0.59|6.22|-|0|None,GAS5|2	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8112060427666	2	502.810585	1003.60662	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.296	1	59.264	58.764	59.764	1.9684								0	0	0	0.46228	1	24034	24034		62.573	3.8939	1				12626	165	6359	6388	15269	15269					0.10495807862378115
KEIKKRIRQ	9	Unmodified	_KEIKKRIRQ_					0	0	0			REV__tr|A0A7D6VSK3|A0A7D6VSK3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_07130PE=4SV=1	REV__tr|A0A7D6VSK3|A0A7D6VSK3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_07130PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1284362673759	4	300.44902	1197.76697	-0.057742	-1.7348E-05	-2.7713	-0.00083262	-2.829	-0.00084997	300.44735261237605	25.205	0.63792	26.921	26.514	27.152	1.7167					29	20	2	0	0	0	0.11955	1	10447	10447		0	0	1	731660	+		12627	15452	6360	6389	15270	15270					0.17600155579248167
KEIKRLYFK	9	Unmodified	_KEIKRLYFK_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	306.1917602419853	4	306.942034	1223.73903	1.4242	0.00043713	-0.41694	-0.00012798	1.0072	0.00030916	306.94289426226555	80.208	1.7189	81.459	80.925	82.644	1.2512					70	55	2	0	0	0	0.11954	1	34159	34159		0	0	1	559560			12628	17231	6361	6390	15271	15271					0.13610832599169953
KEILPEKVRKR	11	Unmodified	_KEILPEKVRKR_					0	0	0		tr|A0A7D7A615|A0A7D7A615_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08565PE=4SV=1	tr|A0A7D7A615|A0A7D7A615_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08565PE=4SV=1	tr|A0A7D7A615|A0A7D7A615_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08565PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.9662048220634	3	465.964666	1394.87217	3.3574	0.0015644	-0.10679	-4.9762E-05	3.2506	0.0015147	465.9642490519607	105.82	0.18872	105.98	105.89	106.08	0.15859					28	9	5	0	0	0	1.0402	1	45154	45154		0.073264	0.073264	1	55126000			12629	17303	6362	6391	15272	15272					0.1905265198502093
KEIQRCRRLIL	11	Unmodified	_KEIQRCRRLIL_					0	0	0		nc|ENSG00000198380|Q06210-2|GFPT1;ENSG00000198380|ENST00000357308|GFPT1	nc|ENSG00000198380|Q06210-2|GFPT1	nc|ENSG00000198380|Q06210-2|GFPT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	476.6253539919853	3	476.625767	1426.85547	1.8284	0.00087144	0.42389	0.00020204	2.2522	0.0010735	476.6259225298702	97.673	0.15221	97.673	97.569	97.721	0					17	4	5	0	0	0	1.0396	1	40829	40829		0.073264	0	1	41951000			12630	5050	6363	6392	15273	15273					0.15911827827449088
KEIRNIVPKW	10	Unmodified	_KEIRNIVPKW_					0	0	0			REV__tr|A0A553SRZ1|A0A553SRZ1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02090PE=3SV=1	REV__tr|A0A553SRZ1|A0A553SRZ1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02090PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8838378787041	2	641.885147	1281.75574	2.163	0.0013884	-2.4407	-0.0015666	-0.27766	-0.00017823	641.8836429475442	78.151	1.4143	79.432	78.823	80.238	1.2809					100	45	3	0	0	0	0.88579	1	32767	32767		2.9952	1.5133	1	2775700	+		12631	15184	6364	6393	15274	15274					0.12613333485114708
KEIRQRILRL	10	Unmodified	_KEIRQRILRL_					0	0	0		ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	662.9305908083916	2	662.93042	1323.84629	1.4815	0.00098214	0.97901	0.00064901	2.4605	0.0016312	662.929774061404	105.92	0.13181	105.92	105.86	105.99	0					16	6	3	0	0	0	0.89803	1	45083	45083		1.4819	0	1	46678000			12632	4556	6365	6394	15275	15275					0.19731802533419796
KEIRQRILRL	10	Unmodified	_KEIRQRILRL_					0	0	0		ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	662.9313842654228	2	662.93042	1323.84629	3.0851	0.0020452	-0.42655	-0.00028277	2.6586	0.0017624	662.9295902153748	105.85	0.13731	106.02	105.94	106.07	0.16679					20	6	4	0	0	0	0.89803	1	45109	45109		1.4819	0	1	222280000			12633	4556	6365	6394	15276	15276					0.19731802533419796
KEIRQRILRL	10	Unmodified	_KEIRQRILRL_					0	0	0		ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	662.93042	1323.84629	2.9717	0.00197	0.32087	0.00021271	3.2926	0.0021828	662.9303524805583	105.87	0.15476	106.03	105.94	106.1	0.15859	0.048797	0.00037993	NaN	1.4819	26	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259510000			12634	4556	6365	6394							0.19731802533419796
KEIRQRILRL	10	Unmodified	_KEIRQRILRL_					0	0	0		ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	662.93042	1323.84629	3.0851	0.0020452	-0.42655	-0.00028277	2.6586	0.0017624	662.9295902153748	105.85	0.13731	106.02	105.94	106.07	0.16679	0.038407	-0.00061104	NaN	1.4819	20	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	222280000			12635	4556	6365	6394							0.19731802533419796
KEIRWYRLFDR	11	Unmodified	_KEIRWYRLFDR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	527.9621459841728	3	527.959803	1580.85758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.676	1	19.676	19.176	20.176	0								0	0	0	0.63775	1	8178	8178		0.36667	0.22678	1		+		12636	8998	6366	6395	15277	15277					0.09038579836851568
KEIRYLKSVIM	11	Unmodified	_KEIRYLKSVIM_					0	0	0			REV__ENST00000608432.5_2_2:145780810-145939776:+|nuORF	REV__ENST00000608432.5_2_2:145780810-145939776:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	690.4060546755791	2	690.407598	1378.80064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.851	1	93.851	93.351	94.351	0								0	0	0	0.63775	1	39221	39221		0.26902	0.033176	1		+		12637	14150	6367	6396	15278	15278					0.12639396236136236
KEKEYREKQRR	11	Unmodified	_KEKEYREKQRR_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6262084841728	3	517.290101	1548.84847	3.3618	0.001739	2.2956	0.0011875	5.6574	0.0029265	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0402	1	49905	49905		0.094841	0	1	11283000	+		12638	9664	6368	6397	15279	15279					0.09600186480520279
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2106201052666	3	409.875405	1226.60439	-0.77303	-0.00031685	1.4102	0.00057801	0.63717	0.00026116	409.87575773523656	12.298	0.43329	12.298	12.188	12.622	0					18	13	2	0	0	0	0.61249	1	5085	5085		10.8	5.3968	1	2577900	+		12639	15764	6369	6398	15280	15280					0.00014727386610502435
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.8745605349541	3	409.875405	1226.60439	0.35018	0.00014353	-0.00030056	-1.2319E-07	0.34988	0.00014341	409.8752209406009	12.272	0.37193	12.361	12.276	12.648	0.089381					19	11	3	0	0	0	0.61249	1	5098	5098		10.8	6.0836	1	607260	+		12640	15764	6369	6398	15281	15281					0.00014727386610502435
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	409.875405	1226.60439	-0.77303	-0.00031685	1.4102	0.00057801	0.63717	0.00026116	409.87575773523656	12.298	0.43329	12.298	12.188	12.622	0	-0.12032	0.00039296	NaN	10.8	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2577900	+		12641	15764	6369	6398							0.00014727386610502435
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	409.875405	1226.60439	0.35018	0.00014353	-0.00030056	-1.2319E-07	0.34988	0.00014341	409.8752209406009	12.272	0.37193	12.361	12.276	12.648	0.089381	-0.057717	-0.0013414	NaN	10.8	19	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607260	+		12642	15764	6369	6398							0.00014727386610502435
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	409.875405	1226.60439	-0.55481	-0.0002274	2.385	0.00097754	1.8302	0.00075014	409.87642065501797	11.833	0.12414	12.526	12.448	12.572	0.69396	0.1078	0.0015916	NaN	10.8	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	298370	+		12643	15764	6369	6398							0.00014727386610502435
KEKHEEYHK	9	Unmodified	_KEKHEEYHK_					0	0	0			REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	REV__tr|A0A7D6ZXQ9|A0A7D6ZXQ9_9CLOTnucleoside-diphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ndkPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	409.875405	1226.60439	-0.0033056	-1.3549E-06	0.90881	0.0003725	0.9055	0.00037114	409.875880590136	11.701	0.12599	12.489	12.442	12.568	0.78751	0.070236	-0.00022357	NaN	10.8	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278060	+		12644	15764	6369	6398							0.00014727386610502435
KEKLLKSSK	9	Unmodified	_KEKLLKSSK_					0	0	0		ENST00000322349.12_1_12:93226388-93226439:-|nuORF	ENST00000322349.12_1_12:93226388-93226439:-|nuORF	ENST00000322349.12_1_12:93226388-93226439:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.7293578982353	2	530.839874	1059.66519	3.4724	0.0018433	3.8632	0.0020507	7.3356	0.003894	531.341273291295	95.887	0.12815	96.289	96.207	96.336	0.40208					5	3	2	0	0	0	0.11611	1	40350	40350		1.3295	0.25807	1	1169000			12645	5856	6370	6399	15282	15282					0.13774864436868484
KELCKRVVKKV	11	Unmodified	_KELCKRVVKKV_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	665.4283325076103	2	665.423582	1328.83261	3.8272	0.0025467	-0.79841	-0.00053128	3.0288	0.0020155	665.4228586391046	95.375	0.33142	95.796	95.675	96.006	0.4212					22	12	3	0	0	0	1.0366	1	40190	40190		1.1933	0.735	1	3010100	+		12646	8820	6371	6400	15283	15283					0.18134808709942263
KELCKRVVKKV	11	Unmodified	_KELCKRVVKKV_					0	0	0			REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	REV__nc|ENSG00000081803|Q86UW7-3|CADPS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	665.4256469607353	2	665.423582	1328.83261	3.0616	0.0020373	-3.2224	-0.0021443	-0.16079	-0.00010699	665.4211323826815	95.15	0.27541	95.553	95.385	95.66	0.40208					23	11	3	0	0	0	1.0366	1	40016	40016		1.1933	0	1	4686000	+		12647	8820	6371	6400	15284	15284					0.18134808709942263
KELEKHREKL	10	Unmodified	_KELEKHREKL_					0	0	0		nc|ENSG00000234545|Q5BKY9-2|FAM133B;ENSG00000234545|ENST00000445716|FAM133B;ENST00000332869.5_1_10:60475484-60475616:+|nuORF;ENST00000481407.5_1_7:92207439-92210911:-|nuORF	nc|ENSG00000234545|Q5BKY9-2|FAM133B	nc|ENSG00000234545|Q5BKY9-2|FAM133B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	655.3846313357353	2	655.382968	1308.75138	2.2644	0.001484	-0.34372	-0.00022527	1.9206	0.0012588	655.3824177491845	83.357	2.4268	83.627	82.756	85.183	0.27029					216	77	5	0	0	0	0.89803	1	34959	34959		0.35063	0	1	5228000			12648	5312	6372	6401	15285	15285					0.10935824271541605
KELGKQLPVLS	11	Unmodified	_KELGKQLPVLS_					0	0	0			REV__ENST00000440623.5_1_2:182756982-182781157:+|nuORF	REV__ENST00000440623.5_1_2:182756982-182781157:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3741332888603	2	606.371538	1210.72852	1.2866	0.00078016	-1.2478	-0.00075661	0.038828	2.3544E-05	606.3721141992958	77.239	0.50484	78.99	78.786	79.29	1.7514					35	15	3	0	0	0	1.0214	1	32365	32365		2.4985	0.84587	1	1578900	+		12649	10064	6373	6402	15286	15286					0.13158805154080255
KELKKKPIEVI	11	Unmodified	_KELKKKPIEVI_					0	0	0		tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.9321777224541	2	662.931763	1323.84897	2.9717	0.00197	-1.9975	-0.0013242	0.97415	0.0006458	662.9304296825878	107.28	0.18492	107.44	107.36	107.54	0.15781					34	9	5	0	0	0	1.0365	1	46093	46093		2.9952	1.8019	1	189990000			12650	17075	6374	6403	15287	15287					0.20000213147704926
KELKKKPIEVI	11	Unmodified	_KELKKKPIEVI_					0	0	0		tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	662.931763	1323.84897	1.4815	0.00098216	-1.6285	-0.0010796	-0.14693	-9.7407E-05	662.9306186812573	107.34	0.24347	107.34	107.23	107.47	0	-0.058265	0.00094903	NaN	2.9952	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16269000			12651	17075	6374	6403							0.20000213147704926
KELKKKPIEVI	11	Unmodified	_KELKKKPIEVI_					0	0	0		tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	662.931763	1323.84897	2.6741	0.0017727	-3.1937	-0.0021172	-0.51961	-0.00034447	663.4308327122536	107.31	0.18982	107.36	107.29	107.48	0.052452	-0.038289	-0.0011262	NaN	2.9952	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15380000			12652	17075	6374	6403							0.20000213147704926
KELKKKPIEVI	11	Unmodified	_KELKKKPIEVI_					0	0	0		tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	tr|A0A7D6ZGL9|A0A7D6ZGL9_9CLOTDUF3102domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19300PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	662.931763	1323.84897	3.0831	0.0020439	-2.8095	-0.0018625	0.27364	0.0001814	662.929887089801	107.3	0.19002	107.46	107.33	107.52	0.15795	0.057238	-0.00061685	NaN	2.9952	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93961000			12653	17075	6374	6403							0.20000213147704926
KELKRKAAARE	11	Unmodified	_KELKRKAAARE_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	650.3965331912041	2	650.39641	1298.77827	2.3071	0.0015006	-2.2631	-0.0014719	0.044074	2.8665E-05	650.3947838765138	81.483	2.4977	81.483	80.791	83.289	0					178	81	4	0	0	0	1.0214	5	33988	33707;33771;33887;33988;34040		2.4985	1.3051	1	9280600	+		12654	8235	6375	6404	15288;15289;15290;15291;15292	15291					0.140829328827067
KELKRKAAARE	11	Unmodified	_KELKRKAAARE_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3970825076103	2	650.39641	1298.77827	1.9699	0.0012812	-1.6854	-0.0010962	0.28447	0.00018502	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0214	3	34128	33763;33973;34128		2.4985	1.3051	1	10064000	+		12655	8235	6375	6404	15293;15294;15295	15295					0.140829328827067
KELKRKAAARE	11	Unmodified	_KELKRKAAARE_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3963500857353	2	650.39641	1298.77827	2.4864	0.0016171	-1.3831	-0.00089957	1.1033	0.00071756	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	1.0214	1	33806	33806		2.4985	1.3051	1	5912000	+		12656	8235	6375	6404	15296	15296					0.140829328827067
KELKRKAAARE	11	Unmodified	_KELKRKAAARE_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3968994021416	2	650.39641	1298.77827	1.7147	0.0011152	-0.87762	-0.0005708	0.83705	0.00054441	650.3956760346166	77.853	0.76601	79.605	79.32	80.086	1.7514					63	24	3	0	0	0	1.0214	2	32794	32635;32794		2.4985	0	1	1890400	+		12657	8235	6375	6404	15297;15298	15298					0.140829328827067
KELKRKAAARE	11	Unmodified	_KELKRKAAARE_					0	0	0			REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	REV__nc|ENSG00000119969|Q9NRZ9-6|HELLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3960449099541	2	650.39641	1298.77827	1.4428	0.00093839	-1.4417	-0.0009377	0.0010551	6.8626E-07	650.3954296335871	80.232	1.1244	81.948	81.631	82.755	1.7167					53	36	2	0	0	0	1.0214	2	33595	33595;33647		2.4985	1.0166	1	7773900	+		12658	8235	6375	6404	15299;15300	15299					0.140829328827067
KELKRRREP	9	Unmodified	_KELKRRREP_					0	0	0			REV__ENSG00000132518|ENST00000254854|GUCY2D	REV__ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3710204958916	2	606.370195	1210.72584	2.1574	0.0013082	-0.97056	-0.00058852	1.1869	0.00071968	606.369549653458	77.018	0.66023	77.018	76.403	77.063	0					52	20	3	0	0	0	0.85068	1	32002	32002		0.45834	0	1	5160500	+		12659	9848	6376	6405	15301	15301					0.12890394539772387
KELKRRREP	9	Unmodified	_KELKRRREP_					0	0	0			REV__ENSG00000132518|ENST00000254854|GUCY2D	REV__ENSG00000132518|ENST00000254854|GUCY2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3703491091728	2	606.370195	1210.72584	1.9807	0.0012011	-0.84354	-0.0005115	1.1372	0.00068956	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	0.8432	2	32385	31962;32385		1.4819	0	1	10235000	+		12660	9848	6376	6405	15302;15303	15303					0.12890394539772387
KELLIAVTT	9	Unmodified	_KELLIAVTT_					0	0	0		tr|A0A553SRR6|A0A553SRR6_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_01470PE=4SV=1	tr|A0A553SRR6|A0A553SRR6_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_01470PE=4SV=1	tr|A0A553SRR6|A0A553SRR6_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_01470PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	494.0586120486259	2	494.307875	986.601197	0.90451	0.00044711	-0.42528	-0.00021022	0.47923	0.00023688	494.3075288734417	99.867	0.11799	99.867	99.796	99.914	0					5	3	2	0	0	0	0.11851	1	41811	41811		1.6526	0	1	3822200			12661	16576	6377	6406	15304	15304					0.10736084279892566
KELLRQYKKLV	11	Unmodified	_KELLRQYKKLV_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.3011352419853	3	473.301166	1416.88167	2.0149	0.00095367	-3.5068	-0.0016598	-1.4918	-0.00070609	473.2994215076314	97.245	0.18723	97.245	97.165	97.353	0					20	5	5	0	0	0	1.0282	1	40650	40650		2.084	0.34169	1	37318000	+		12662	11727	6378	6407	15305	15305					0.18990420270529285
KELNIKELRPN	11	Unmodified	_KELNIKELRPN_					0	0	0		tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3975097537041	2	677.396076	1352.7776	2.753	0.0018649	-1.3559	-0.0009185	1.3971	0.0009464	677.3951051592902	85.403	1.3251	85.403	84.589	85.914	0					130	41	4	0	0	0	1.0373	1	35501	35501		0.96228	0	1	4030800			12663	16161	6379	6408	15306	15306					0.1153209344302013
KELQLERKRI	10	Unmodified	_KELQLERKRI_					0	0	0		tr|A0A7D6ZSG7|A0A7D6ZSG7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07730PE=3SV=1	tr|A0A7D6ZSG7|A0A7D6ZSG7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07730PE=3SV=1	tr|A0A7D6ZSG7|A0A7D6ZSG7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07730PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2733337283134	3	438.273499	1311.79867	3.1458	0.0013787	-3.2831	-0.0014389	-0.13728	-6.0167E-05	438.27197011862785	95.835	0.34222	95.958	95.801	96.144	0.12331					35	11	4	0	0	0	0.8974	1	40086	40086		1.7423	0	1	54323000			12664	17133	6380	6409	15307	15307					0.15524103542543344
KELREVLGNRI	11	Unmodified	_KELREVLGNRI_					0	0	0		tr|A0A7D6VMV8|A0A7D6VMV8_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13285PE=4SV=1	tr|A0A7D6VMV8|A0A7D6VMV8_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13285PE=4SV=1	tr|A0A7D6VMV8|A0A7D6VMV8_9CLOTParAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.9016601443291	2	663.896243	1325.77793	2.3625	0.0015684	-1.0947	-0.00072678	1.2678	0.00084166	663.8961210891454	82.059	0.69994	82.059	81.915	82.615	0					49	22	3	0	0	0	1.037	1	34320	34320		1.0715	0.5467	1	1314900			12665	16719	6381	6410	15308	15308					0.12807513162874784
KELRKDRLKN	10	Unmodified	_KELRKDRLKN_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3976928591728	2	650.39641	1298.77827	2.3021	0.0014973	0.06697	4.3557E-05	2.3691	0.0015408	650.3960288834429	78.297	1.3522	79.564	78.809	80.161	1.2668					81	43	3	0	0	0	0.89803	1	32977	32977		1.1933	0	1	2143900	+		12666	9799	6382	6411	15309	15309					0.14082932882729438
KEMLSLHIGI	10	Unmodified	_KEMLSLHIGI_					0	0	0			REV__ENSG00000119522|ENST00000394215|DENND1A	REV__ENSG00000119522|ENST00000394215|DENND1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8863098025322	3	380.886365	1139.63727	0.27359	0.00010421	-1.1209	-0.00042694	-0.84732	-0.00032273	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.88916	1	21262	21262		2.6312	0	1	18085000	+		12667	9542	6383	6412	15310	15310					0.07303218185120386
KEMVQEDQKR	10	Unmodified	_KEMVQEDQKR_					0	0	0		GGA1|p.Y253Sfs*25|1|0.22|ENSG00000100083|chr22:37623559-37623559|A/-|frameshift_variant;nc|ENSG00000100083|Q9UJY5-4|GGA1;nc|ENSG00000100083|Q9UJY5-3|GGA1;nc|ENSG00000100083|Q9UJY5-2|GGA1;ENSG00000100083|ENST00000343632|GGA1;nc|ENSG00000100083|Q9UJY5-6|GGA1	GGA1|p.Y253Sfs*25|1|0.22|ENSG00000100083|chr22:37623559-37623559|A/-|frameshift_variant	GGA1|p.Y253Sfs*25|1|0.22|ENSG00000100083|chr22:37623559-37623559|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8892394900322	3	430.887205	1289.63978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.863	1	64.863	64.363	65.363	0								0	0	0	0.66222	1	27034	27034		0.69767	0.24315	1				12668	1236	6384	6413	15311	15311					0.006550218520942508
KENKEKAP	8	Unmodified	_KENKEKAP_					0	0	0			REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1783325076103	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.857	1	88.857	88.357	89.357	0								0	0	0	1.0178	1	37147	37147		1.6526	0	1		+		12669	10201	6385	6414	15312	15312					0.03988883409135724
KENKEKAP	8	Unmodified	_KENKEKAP_					0	0	0			REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1788513064384	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.992	1	88.992	88.492	89.492	0								0	0	0	1.0178	1	37202	37202		1.6526	0	1		+		12670	10201	6385	6414	15313	15313					0.03988883409135724
KENKEKAP	8	Unmodified	_KENKEKAP_					0	0	0			REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1790954470634	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.371	1	89.371	88.871	89.871	0								0	0	0	1.0178	1	37357	37357		1.6526	0	1		+		12671	10201	6385	6414	15314	15314					0.03988883409135724
KENKEKAP	8	Unmodified	_KENKEKAP_					0	0	0			REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	REV__ENST00000477306.1_1_1:156713442-156714029:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1788207888603	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.53	1	89.53	89.03	90.03	0								0	0	0	1.0178	1	37423	37423		1.6526	0	1		+		12672	10201	6385	6414	15315	15315					0.03988883409135724
KEPGYSFVF	9	Unmodified	_KEPGYSFVF_					0	0	0			REV__ENST00000479185.1_1_2:218746916-218750490:-|nuORF	REV__ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2661620974541	2	537.26875	1072.52295	1.3615	0.00073151	-0.93925	-0.00050463	0.42228	0.00022688	537.2684333249745	38.004	1.8615	39.288	38.601	40.463	1.284					178	71	3	0	0	0	0.23219	3	15722	15722;16044;16228		38.176	16.429	1	19809000	+		12673	8797	6386	6415	15316;15317;15318	15316					-0.010413483053298478
KEPGYSFVF	9	Unmodified	_KEPGYSFVF_					0	0	0			REV__ENST00000479185.1_1_2:218746916-218750490:-|nuORF	REV__ENST00000479185.1_1_2:218746916-218750490:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2682372927666	2	537.26875	1072.52295	0.92958	0.00049944	-0.7494	-0.00040263	0.18018	9.6805E-05	537.2685895278216	37.149	1.9185	38.969	38.526	40.445	1.8202					189	75	3	0	0	0	0.14534	1	15498	15498		34.932	0	1	8408100	+		12674	8797	6386	6415	15319	15319					-0.010413483053298478
KERAKLPLTIG	11	Unmodified	_KERAKLPLTIG_					0	0	0			REV__ENST00000515734.2_1_5:59783993-59785590:+|nuORF	REV__ENST00000515734.2_1_5:59783993-59785590:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	613.3893920779228	2	613.38498	1224.75541	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.324	1	85.324	84.824	85.824	0								0	0	0	0.63775	1	35550	35550		2.2828	0.95324	1		+		12675	13602	6387	6416	15320	15320					0.1520191376528146
KERDLIGSV	9	Unmodified	_KERDLIGSV_					0	0	0			REV__nc|ENSG00000196159|Q6V0I7-2|FAT4	REV__nc|ENSG00000196159|Q6V0I7-2|FAT4	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.7935974001884	2	508.790381	1015.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.573	1	72.898	72.398	73.398	0.32494								0	0	0	0.18991	1	30364	30364		26.884	3.7352	1		+		12676	11619	6388	6417	15321	15321					0.05904841471965483
KEREKKRKRKL	11	Unmodified	_KEREKKRKRKL_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1282836794853	5	300.598869	1497.95796	0.17472	5.2521E-05	-1.4792	-0.00044464	-1.3045	-0.00039212	300.7986817075031	25.252	0.092058	25.504	25.428	25.52	0.25197					4	2	2	0	0	0	0.14606	1	10531	10531		0.094841	0	1	80308	+		12677	9797	6389	6418	15322	15322					0.2289023689052101
KERERRQRRR	10	Unmodified	_KERERRQRRR_					0	0	0			REV__ENSG00000159450|ENST00000614923|TCHH	REV__ENSG00000159450|ENST00000614923|TCHH	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	491.2894775271416	3	490.625929	1468.85596	1.272	0.00062407	3.7441	0.0018369	5.0161	0.002461	490.62782722772664	97.492	0.27689	97.492	97.353	97.63	0					11	8	2	0	0	0	0.1256	1	40722	40722		0.62683	0.17231	1	1361800	+		12678	10574	6390	6419	15323	15323					0.14028383591494276
KERKEKKENLL	11	Unmodified	_KERKEKKENLL_					0	0	0			REV__tr|A0A7D6ZWB6|A0A7D6ZWB6_9CLOTTryptophansynthasealphachainOS=ClostridiumintestinaleOX=36845GN=trpAPE=3SV=1	REV__tr|A0A7D6ZWB6|A0A7D6ZWB6_9CLOTTryptophansynthasealphachainOS=ClostridiumintestinaleOX=36845GN=trpAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2851745486259	3	472.284064	1413.83036	4.2722	0.0020177	-2.6732	-0.0012625	1.599	0.00075518	472.2828208833759	86.066	0.49659	87.613	87.512	88.008	1.547					41	18	3	0	0	0	1.0362	1	36287	36287		1.3296	0.11481	1	5622800	+		12679	15744	6391	6420	15324	15324					0.14000051505854572
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1015502810478	4	370.490214	1477.93175	-0.99344	-0.00036806	0.7586	0.00028105	-0.23484	-8.7007E-05	370.4903678678566	32.626	0.71098	32.626	32.349	33.06	0					51	22	3	0	0	0	0.14606	1	13821	13821		0.08335	0	1	2265600			12680	5456	6392	6421	15325	15325					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1012756228447	4	370.490214	1477.93175	-1.0991	-0.00040719	1.0449	0.00038713	-0.054141	-2.0059E-05	370.49055031417333	30.172	0.7673	30.172	29.701	30.469	0					57	24	3	0	0	0	0.14606	1	12585	12585		0.08335	0	1	1748300			12681	5456	6392	6421	15326	15326					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1015197634697	4	370.490214	1477.93175	-1.0221	-0.00037869	1.0607	0.00039296	0.038526	1.4273E-05	370.4904233326963	31.891	1.1179	31.891	31.231	32.349	0					87	35	3	0	0	0	0.14606	1	13300	13300		0.08335	0.08335	1	2175700			12682	5456	6392	6421	15327	15327					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1016418337822	4	370.490214	1477.93175	-0.91657	-0.00033958	0.98197	0.00036381	0.065395	2.4228E-05	370.49047386615206	34.626	0.92331	34.626	34.131	35.055	0					46	30	2	0	0	0	0.14606	1	14453	14453		0.08335	0	1	1033200			12683	5456	6392	6421	15328	15328					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1016418337822	4	370.490214	1477.93175	0.89961	0.0003333	-0.84621	-0.00031351	0.053404	1.9786E-05	370.74020836753925	29.018	0.79028	29.297	28.769	29.559	0.2793					57	25	3	0	0	0	0.14606	1	11953	11953		0	0	1	2627400			12684	5456	6392	6421	15329	15329					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1021301150322	4	370.490214	1477.93175	0.10732	3.9762E-05	-0.46075	-0.0001707	-0.35343	-0.00013094	370.4900767216358	27.671	0.5878	28.95	28.565	29.153	1.2789					46	18	3	0	0	0	0.14606	1	11519	11519		0	0	1	3001300			12685	5456	6392	6421	15330	15330					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1016418337822	4	370.490214	1477.93175	-0.13181	-4.8835E-05	-0.015437	-5.7194E-06	-0.14725	-5.4554E-05	370.74078994741785	29.852	1.2302	31.135	30.674	31.905	1.2825					72	39	2	0	0	0	0.14606	1	12483	12483		0.08335	0	1	2829900			12686	5456	6392	6421	15331	15331					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1005737185478	4	370.490214	1477.93175	0.47767	0.00017697	-0.36985	-0.00013702	0.10783	3.995E-05	370.7402473636494	29.52	0.85614	31.319	31.051	31.907	1.7987					40	27	2	0	0	0	0.14606	1	12320	12320		0	0	1	3653400			12687	5456	6392	6421	15332	15332					0.21189967719055858
KERLKQKHKKR	11	Unmodified	_KERLKQKHKKR_					0	0	0		ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1007568240166	4	370.490214	1477.93175	0.50971	0.00018884	-0.091309	-3.3829E-05	0.4184	0.00015501	370.49014580786707	32.712	0.080204	34.537	34.499	34.579	1.8246					4	2	2	0	0	0	0.14606	1	13698	13698		0	0	1	1152400			12688	5456	6392	6421	15333	15333					0.21189967719055858
KESVLTFFNKF	11	Unmodified	_KESVLTFFNKF_					0	0	0			REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	MSMS	GG20161007_CRH_Patient100_A02_01	1	680.3711425662041	2	680.368995	1358.72344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.591	1	94.591	94.091	95.091	0								0	0	0	0.63775	1	39533	39533		5.2969	0.39987	1		+		12689	9569	6393	6422	15334	15334					0.05842501291476765
KESVLTFFNKF	11	Unmodified	_KESVLTFFNKF_					0	0	0			REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	MSMS	GG20161007_CRH_Patient100_A02_01	1	680.3709594607353	2	680.368995	1358.72344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.705	1	94.705	94.205	95.205	0								0	0	0	0.63775	1	39580	39580		5.2969	0.39987	1		+		12690	9569	6393	6422	15335	15335					0.05842501291476765
KESVLTFFNKF	11	Unmodified	_KESVLTFFNKF_					0	0	0			REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	MSMS	GG20161007_CRH_Patient100_A02_01	1	680.3708373904228	2	680.368995	1358.72344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.826	1	94.826	94.326	95.326	0								0	0	0	0.63775	1	39631	39631		5.2969	0.39987	1		+		12691	9569	6393	6422	15336	15336					0.05842501291476765
KESVLTFFNKF	11	Unmodified	_KESVLTFFNKF_					0	0	0			REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	MSMS	GG20161007_CRH_Patient100_A02_02	2	680.3702880740166	2	680.368995	1358.72344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.396	1	94.541	94.041	95.041	0.14493								0	0	0	0.63775	1	39509	39509		5.2969	0.39987	1		+		12692	9569	6393	6422	15337	15337					0.05842501291476765
KESVLTFFNKF	11	Unmodified	_KESVLTFFNKF_					0	0	0			REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	REV__nc|ENSG00000120327|Q9Y5E9-2|PCDHB14	MSMS	GG20161007_CRH_Patient100_A02_02	2	680.3710815310478	2	680.368995	1358.72344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.514	1	94.659	94.159	95.159	0.14493								0	0	0	0.63775	1	39557	39557		5.2969	0.39987	1		+		12693	9569	6393	6422	15338	15338					0.05842501291476765
KESVTKEEITE	11	Unmodified	_KESVTKEEITE_					0	0	0		tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8346435427666	2	646.83264	1291.65073	0.51179	0.00033104	0.91462	0.00059161	1.4264	0.00092265	646.8333204016724	23.859	0.24356	25.543	25.387	25.631	1.6845					13	7	2	0	0	0	0.83687	1	9989	9989		13.615	0	1	611640			12694	17329	6394	6423	15339	15339					0.016567027073733698
KETEKLREEE	10	Unmodified	_KETEKLREEE_					0	0	0		nc|ENSG00000132321|Q86XH1-5|IQCA1;ENSG00000132321|ENST00000409907|IQCA1;nc|ENSG00000132321|Q86XH1-2|IQCA1;IQCA1|p.R224C|1|0.6|ENSG00000132321|chr2:236486879-236486879|G/A|missense_variant	nc|ENSG00000132321|Q86XH1-5|IQCA1	nc|ENSG00000132321|Q86XH1-5|IQCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8894225955009	3	430.88938	1289.64631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.422	1	44.422	43.922	44.922	0								0	0	0	0.66227	1	18589	18589		0.62683	0.063655	1				12695	2525	6395	6424	15340	15340					0.013072382844711683
KEVDSICEEF	10	Unmodified	_KEVDSICEEF_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;ENST00000497875.1_1_3:52356446-52387784:+|nuORF;DNAH1|p.Q1748Tfs*9|1|0.17|ENSG00000114841|chr3:52363140-52363141|-/AA|frameshift_variant;DNAH1|p.E2311Rfs*58|1|0.32|ENSG00000114841|chr3:52372997-52372998|-/A|frameshift_variant	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.7699462771416	2	599.768454	1197.52235	0.92741	0.00055623	1.2709	0.00076224	2.1983	0.0013185	599.7692602984207	14.534	0.246	14.534	14.412	14.658	0					15	7	3	0	0	0	0.76954	1	6020	6020		15.248	0.41021	1	865210			12696	1884	6396	6425	15341	15341					-0.0685055580736389
KEVPLHVLALC	11	Unmodified	_KEVPLHVLALC_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3570434451103	2	611.354834	1220.69511	2.1411	0.001309	2.3067	0.0014102	4.4478	0.0027192	611.3559752604883	77.193	1.4644	77.193	76.284	77.749	0					117	46	3	0	0	0	1.0366	1	31917	31917		1.1933	0.59184	1	2596800	+		12697	11593	6397	6426	15342	15342					0.09359480110538243
KFAEEFYSF	9	Unmodified	_KFAEEFYSF_					0	0	0		nc|ENSG00000164649|Q96GN5-5|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L;nc|ENSG00000164649|Q96GN5-2|CDCA7L;ENSG00000164649|ENST00000406877|CDCA7L	nc|ENSG00000164649|Q96GN5-5|CDCA7L	nc|ENSG00000164649|Q96GN5-5|CDCA7L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2716552615166	2	584.27149	1166.52843	1.2872	0.0007521	-1.0648	-0.00062215	0.22241	0.00012995	584.2709187707509	53.814	0.72927	55.215	55.005	55.735	1.4005					72	25	5	0	0	0	0.015029	4	22576	22482;22525;22576;22616		103.35	57.333	1	52344000			12698	3789	6398	6427	15343;15344;15345;15346	15345					-0.0481766951352256
KFAEEFYSF	9	Unmodified	_KFAEEFYSF_					0	0	0		nc|ENSG00000164649|Q96GN5-5|CDCA7L;nc|ENSG00000164649|Q96GN5-4|CDCA7L;nc|ENSG00000164649|Q96GN5-2|CDCA7L;ENSG00000164649|ENST00000406877|CDCA7L	nc|ENSG00000164649|Q96GN5-5|CDCA7L	nc|ENSG00000164649|Q96GN5-5|CDCA7L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2715942263603	2	584.27149	1166.52843	0.56563	0.00033048	-0.76989	-0.00044983	-0.20426	-0.00011935	584.2710194914522	53.337	0.65054	55.306	55.039	55.69	1.9697					63	23	4	0	0	0	0.0033884	4	22337	22286;22337;22376;22428		126.57	65.208	1	49194000			12699	3789	6398	6427	15347;15348;15349;15350	15348					-0.0481766951352256
KFAGGGAI	8	Unmodified	_KFAGGGAI_					0	0	0			REV__tr|A0A553SUK5|A0A553SUK5_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_00230PE=4SV=1	REV__tr|A0A553SUK5|A0A553SUK5_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_00230PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.7051879763603	2	360.705589	719.396624	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.981	1	17.021	16.521	17.521	1.0392								0	0	0	1.0178	1	6633	6633		9.3474	3.587	1		+		12700	15293	6399	6428	15351	15351					0.025701899800310457
KFAYSVTIP	9	Unmodified	_KFAYSVTIP_					0	0	0			REV__ENSG00000143368|ENST00000271628|SF3B4	REV__ENSG00000143368|ENST00000271628|SF3B4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1025.565600574017	1	1025.56661	1024.55933	2.5418	0.0026068	1.4607	0.001498	4.0025	0.0041048	1025.568111967448	88.127	0.33656	88.127	87.967	88.304	0					21	10	3	0	0	0	0.49082	1	36799	36799		15.847	0	1	1474600	+		12701	10205	6400	6429	15352	15352					0.04803528591378381
KFCGGAGH	8	Unmodified	_KFCGGAGH_					0	0	0			REV__ENST00000564278.1_1_16:56873384-56878518:+|nuORF	REV__ENST00000564278.1_1_16:56873384-56878518:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.6782714724541	2	388.679048	775.343543	0.1324	5.1463E-05	-1.9787	-0.0007691	-1.8463	-0.00071763	388.6781138092052	63.817	0.55495	63.817	63.556	64.111	0					46	17	3	0	0	0	0.89198	1	26595	26595		0	0	1	28985000	+		12702	13921	6401	6430	15353	15353					-0.05311511074273767
KFESDHITF	9	Unmodified	_KFESDHITF_					0	0	0			REV__DENND6A|p.E338K|1|0.36|ENSG00000174839|chr3:57645686-57645686|C/T|missense_variant	REV__DENND6A|p.E338K|1|0.36|ENSG00000174839|chr3:57645686-57645686|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.2724487185478	2	562.274564	1122.53457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.735	1	40.572	40.072	41.072	1.8366								0	0	0	0.42615	1	16245	16245		6.2058	0.44535	1		+		12703	8438	6402	6431	15354	15354					-0.021791512820072967
KFFCLGMLLIY	11	Unmodified	_KFFCLGMLLIY_					0	0	0		SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9114257693291	3	449.911634	1346.71307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1274	1	8.2037	7.7037	8.7037	0.07632								0	0	0	0.63775	1	3364	3364		0	0	1				12704	16013	6403	6432	15355	15355					0.053584790410468486
KFFCLGMLLIY	11	Unmodified	_KFFCLGMLLIY_					0	0	0		SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9123107790947	3	449.911634	1346.71307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3112	1	9.3892	8.8892	9.8892	0.077971								0	0	0	0.63775	1	3858	3858		0	0	1				12705	16013	6403	6432	15356	15356					0.053584790410468486
KFFCLGMLLIY	11	Unmodified	_KFFCLGMLLIY_					0	0	0		SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|9|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9118224978447	3	449.911634	1346.71307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5775	1	9.214	8.714	9.714	0.63651								0	0	0	0.63775	1	3560	3560		0	0	1				12706	16013	6403	6432	15357	15357					0.053584790410468486
KFFDLKLIKL	10	Unmodified	_KFFDLKLIKL_					0	0	0			REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2731201052666	3	422.272437	1263.79548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.797	1	77.113	76.613	77.613	0.31653								0	0	0	0.66222	1	32118	32118		0.69767	0.19171	1		+		12707	15367	6404	6433	15358	15358					0.17413460435841444
KFFGAENSVNL	11	Unmodified	_KFFGAENSVNL_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3162719607353	2	613.31422	1224.61389	1.7118	0.0010499	-0.19859	-0.0001218	1.5132	0.00092807	613.3137583900207	42.573	0.18668	44.494	44.353	44.539	1.9211					8	5	2	0	0	0	0.80586	1	17838	17838		15.248	0	1	681530			12708	1601	6405	6434	15359	15359					0.010564956721509589
KFFGAENSVNL	11	Unmodified	_KFFGAENSVNL_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;nc|ENSG00000107537|O14832-2|PHYH	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	613.31422	1224.61389	1.5162	0.00092989	-0.053127	-3.2584E-05	1.463	0.0008973	613.3131489395664	43.202	0.15152	44.556	44.438	44.59	1.3536	0.031195	0.00012708	NaN	15.248	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427810			12709	1601	6405	6434							0.010564956721509589
KFFIWLRVKKK	11	Unmodified	_KFFIWLRVKKK_					0	0	0		ENST00000376083.7_2_9:88296229-88307675:-|nuORF	ENST00000376083.7_2_9:88296229-88307675:-|nuORF	ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.9936401247978	4	373.993329	1491.94421	-0.72887	-0.00027259	0.19971	7.469E-05	-0.52917	-0.0001979	373.99334908946975	36.709	0.56424	36.709	36.569	37.134	0					49	31	2	0	0	0	1.0402	1	15396	15396		0.08335	0	1	2852000			12710	6187	6406	6435	15360	15360					0.21791611129378907
KFFLKIKKN	9	Unmodified	_KFFLKIKKN_					0	0	0			REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2549316287041	3	389.253376	1164.7383	1.0817	0.00042104	1.3487	0.00052498	2.4303	0.00094602	389.2541690215735	29.295	0.78933	29.574	29.32	30.109	0.2793					99	25	5	0	0	0	0.8462	1	12278	12278		1.0715	0.29493	1	111390000	+		12711	12913	6407	6436	15361	15361					0.16252037950130216
KFFLKIKKN	9	Unmodified	_KFFLKIKKN_					0	0	0			REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2542907595634	3	389.253376	1164.7383	0.41105	0.00016	1.6061	0.00062519	2.0172	0.00078519	389.2542152853662	28.011	0.82339	29.29	29.029	29.852	1.2789					100	26	5	0	0	0	0.8462	1	11728	11728		1.0715	0.3738	1	138770000	+		12712	12913	6407	6436	15362	15362					0.16252037950130216
KFFLKIKKN	9	Unmodified	_KFFLKIKKN_					0	0	0			REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2537109255791	3	389.253376	1164.7383	0.58944	0.00022944	0.73391	0.00028568	1.3234	0.00051512	389.25366376432305	29.512	0.45564	31.31	31.082	31.538	1.7987					59	14	5	0	0	0	0.847	1	12346	12346		0.96228	0.26461	1	79877000	+		12713	12913	6407	6436	15363	15363					0.16252037950130216
KFFLKIKKN	9	Unmodified	_KFFLKIKKN_					0	0	0			REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	REV__ENST00000409458.3_2_7:23296839-23297073:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3779785037041	2	583.376426	1164.7383	0.74172	0.0004327	1.8151	0.0010589	2.5568	0.0014916	583.3771807550418	29.967	0.30749	31.782	31.584	31.892	1.8151					19	9	3	0	0	0	0.8462	1	12508	12508		0.52476	0	1	2675800	+		12714	12913	6407	6436	15364	15364					0.16252037950130216
KFFPSVPLFGF	11	Unmodified	_KFFPSVPLFGF_					0	0	0		ENSG00000167196|ENST00000308275|FBXO22	ENSG00000167196|ENST00000308275|FBXO22	ENSG00000167196|ENST00000308275|FBXO22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.8572265505791	2	643.352617	1284.69068	3.7549	0.0024157	1.1198	0.00072042	4.8747	0.0031361	643.352845469267	92.276	0.32458	93.212	93.051	93.375	0.93623					13	9	2	0	0	0	0.31168	1	38852	38852		31.268	21.885	1	600050			12715	3954	6408	6437	15365	15365					0.05972338959259105
KFFPSVPLFGF	11	Unmodified	_KFFPSVPLFGF_					0	0	0		ENSG00000167196|ENST00000308275|FBXO22	ENSG00000167196|ENST00000308275|FBXO22	ENSG00000167196|ENST00000308275|FBXO22	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	643.352617	1284.69068	3.0906	0.0019884	2.229	0.001434	5.3196	0.0034224	643.3531729324645	91.763	0.25661	93.09	92.956	93.213	1.3269	-0.060787	0.0007928	NaN	31.268	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	531740			12716	3954	6408	6437							0.05972338959259105
KFFQAIYLLEV	11	Unmodified	_KFFQAIYLLEV_					0	0	0			REV__nc|ENSG00000120697|Q9Y673-2|ALG5	REV__nc|ENSG00000120697|Q9Y673-2|ALG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.8913452029228	2	685.889564	1369.76457	2.0798	0.0014265	0.51306	0.0003519	2.5928	0.0017784	685.8900765716089	73.078	0.3172	74.888	74.703	75.02	1.8101					16	9	2	0	0	0	0.77451	1	30663	30663		16.149	0.90062	1	851360	+		12717	9576	6409	6438	15366	15366					0.09448262330920443
KFFQAIYLLEV	11	Unmodified	_KFFQAIYLLEV_					0	0	0			REV__nc|ENSG00000120697|Q9Y673-2|ALG5	REV__nc|ENSG00000120697|Q9Y673-2|ALG5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	685.889564	1369.76457	2.5792	0.001769	0.20675	0.0001418	2.7859	0.0019108	685.8886590078649	74.635	0.18722	74.96	74.864	75.051	0.32463	0.030647	0.00037368	NaN	16.149	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	340240	+		12718	9576	6409	6438							0.09448262330920443
KFFQAIYLLEV	11	Unmodified	_KFFQAIYLLEV_					0	0	0			REV__nc|ENSG00000120697|Q9Y673-2|ALG5	REV__nc|ENSG00000120697|Q9Y673-2|ALG5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	685.889564	1369.76457	3.1837	0.0021837	-1.0767	-0.00073852	2.107	0.0014451	685.888101003389	73.622	0.31419	74.94	74.748	75.062	1.318	0.010522	-0.001387	NaN	16.149	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1101100	+		12719	9576	6409	6438							0.09448262330920443
KFFQAIYLLEV	11	Unmodified	_KFFQAIYLLEV_					0	0	0			REV__nc|ENSG00000120697|Q9Y673-2|ALG5	REV__nc|ENSG00000120697|Q9Y673-2|ALG5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	685.889564	1369.76457	2.0798	0.0014265	0.51306	0.0003519	2.5928	0.0017784	685.8900765716089	73.078	0.3172	74.888	74.703	75.02	1.8101	-0.041169	0.00079387	NaN	16.149	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	851360	+		12720	9576	6409	6438							0.09448262330920443
KFFVKILI	8	Unmodified	_KFFVKILI_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MSMS	GG20161007_CRH_Patient100_A02_02	2	504.3393127322197	2	504.336239	1006.65792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.368	1	55.689	55.189	56.189	0.32088								0	0	0	1.0178	1	23181	23181		0	0	1		+		12721	9065	6410	6439	15367	15367					0.15486176627098303
KFFVKILIA	9	Unmodified	_KFFVKILIA_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2395812869072	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.143	1	95.143	94.643	95.643	0								0	0	0	0.42693	1	39761	39761		0	0	1		+		12722	9065	6411	6440	15368	15368					0.15929848172868333
KFFVKILIA	9	Unmodified	_KFFVKILIA_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2397033572197	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.16	1	101.16	100.66	101.66	0								0	0	0	0.42693	1	42352	42352		0	0	1		+		12723	9065	6411	6440	15369	15369					0.15929848172868333
KFFVKILIA	9	Unmodified	_KFFVKILIA_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2392455935478	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.34	1	101.34	100.84	101.84	0								0	0	0	0.42693	1	42435	42435		0	0	1		+		12724	9065	6411	6440	15370	15370					0.15929848172868333
KFFVKILIA	9	Unmodified	_KFFVKILIA_					0	0	0			REV__ENSG00000102239|ENST00000370648|BRS3	REV__ENSG00000102239|ENST00000370648|BRS3	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2393371462822	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.13	1	110.29	109.79	110.79	0.16133								0	0	0	0.42693	1	47845	47845		0	0	1		+		12725	9065	6411	6440	15371	15371					0.15929848172868333
KFFWLLLHHL	10	Unmodified	_KFFWLLLHHL_					0	0	0			REV__tr|A0A7D6ZS45|A0A7D6ZS45_9CLOTDUF2953domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14375PE=4SV=1	REV__tr|A0A7D6ZS45|A0A7D6ZS45_9CLOTDUF2953domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14375PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9350158572197	3	451.932526	1352.77575	2.8581	0.0012917	1.8283	0.00082629	4.6865	0.002118	451.9339715341808	83.082	1.2917	83.352	82.664	83.956	0.27029					61	41	2	0	0	0	0.89803	1	34745	34745		0.15932	0.01943	1	1119200	+		12726	15701	6412	6441	15372	15372					0.11347129215755558
KFGLVPHP	8	Unmodified	_KFGLVPHP_					0	0	0			REV__tr|A0A553SF48|A0A553SF48_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08245PE=4SV=1	REV__tr|A0A553SF48|A0A553SF48_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	449.2677795290947	2	447.763438	893.512323	2.735	0.0012246	1.7805	0.00079726	4.5155	0.0020219	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89176	1	30566	30566		0.79363	0.10326	1	26597000	+		12727	14688	6413	6442	15373	15373					0.06130713830896184
KFGQSSIAK	9	Unmodified	_KFGQSSIAK_					0	0	0			REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2743408083916	2	483.274367	964.53418	1.0206	0.00049322	-0.10747	-5.1936E-05	0.91312	0.00044129	483.2741235681579	13.665	0.28084	13.765	13.685	13.966	0.09944					9	8	2	0	0	0	0.3091	1	5675	5675		24.991	2.2547	1	537230	+		12728	15533	6414	6443	15374	15374					0.05049473788801606
KFGQSSIAK	9	Unmodified	_KFGQSSIAK_					0	0	0			REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	483.274367	964.53418	0.67753	0.00032743	0.62499	0.00030204	1.3025	0.00062947	483.27477401112355	13.872	0.27737	13.872	13.762	14.039	0	0.037423	0.00038188	NaN	24.991	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1711400	+		12729	15533	6414	6443							0.05049473788801606
KFGQSSIAK	9	Unmodified	_KFGQSSIAK_					0	0	0			REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	483.274367	964.53418	1.0206	0.00049322	-0.10747	-5.1936E-05	0.91312	0.00044129	483.2741235681579	13.665	0.28084	13.765	13.685	13.966	0.09944	-0.069834	-0.00032608	NaN	24.991	9	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	537230	+		12730	15533	6414	6443							0.05049473788801606
KFGQSSIAK	9	Unmodified	_KFGQSSIAK_					0	0	0			REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	REV__tr|A0A7D6VVP4|A0A7D6VVP4_9CLOT2-iminoacetatesynthaseThiHOS=ClostridiumintestinaleOX=36845GN=thiHPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	483.274367	964.53418	-1.7578E-05	-8.495E-09	-0.058449	-2.8247E-05	-0.058466	-2.8255E-05	483.2745652832293	13.039	0.096805	13.867	13.824	13.921	0.82789	0.032411	-0.0002787	NaN	24.991	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	186420	+		12731	15533	6414	6443							0.05049473788801606
KFHRLVSTLRP	11	Unmodified	_KFHRLVSTLRP_					0	0	0		nc|ENSG00000145730|P19021-6|PAM;nc|ENSG00000145730|P19021-4|PAM;nc|ENSG00000145730|P19021-3|PAM;ENSG00000145730|ENST00000438793|PAM;nc|ENSG00000145730|P19021-5|PAM;ENST00000505372.1_1_5:102295723-102310166:+|nuORF	nc|ENSG00000145730|P19021-6|PAM	nc|ENSG00000145730|P19021-6|PAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	339.4590026736259	4	339.208299	1352.80409	0.86931	0.00029488	0.21251	7.2086E-05	1.0818	0.00036696	339.20797262671863	39.157	1.3237	40.453	39.569	40.893	1.2961					121	43	4	0	0	0	1.0254	1	16198	16198		2.2527	0.34635	1	4176400			12732	7889	6415	6444	15375	15375					0.14179827125030897
KFIDPIYQVW	10	Unmodified	_KFIDPIYQVW_					0	0	0		nc|ENSG00000085721|Q9NYV6-4|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.8541747927666	2	654.852981	1307.69141	2.4889	0.0016298	0.41578	0.00027227	2.9047	0.0019021	654.8531599416381	69.903	0.81897	71.257	71.021	71.84	1.3536					82	25	5	0	0	0	0.05462	5	29380	29286;29329;29380;29421;29477		121.53	57.574	1	33173000			12733	1064	6416	6445	15376;15377;15378;15379;15380	15378					0.04987133608324257
KFIDPIYQVW	10	Unmodified	_KFIDPIYQVW_					0	0	0		nc|ENSG00000085721|Q9NYV6-4|RRN3;ENST00000427965.6_1_16:29086353-29124388:+|nuORF;nc|ENSG00000085721|Q9NYV6-3|RRN3;ENSG00000085721|ENST00000198767|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	nc|ENSG00000085721|Q9NYV6-4|RRN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.8550903201103	2	654.852981	1307.69141	2.093	0.0013706	0.43315	0.00028365	2.5262	0.0016543	654.8532869286873	69.407	0.85512	71.26	70.977	71.832	1.853					76	26	4	0	0	0	0.058871	5	29184	29058;29105;29144;29184;29232		100.09	44.588	1	25646000			12734	1064	6416	6445	15381;15382;15383;15384;15385	15384					0.04987133608324257
KFIDTTSKF	9	Unmodified	_KFIDTTSKF_					0	0	0		ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF;ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7957641482353	2	543.795132	1085.57571	1.3337	0.00072528	0.057065	3.1032E-05	1.3908	0.00075631	543.7951354363029	24.353	0.3707	25.594	25.392	25.763	1.241					42	11	5	0	0	0	1.8672E-05	3	10224	10142;10185;10224		174.48	91.953	1	25651000			12735	1263	6417	6446	15386;15387;15388	15388					0.03634609757477847
KFIDTTSKF	9	Unmodified	_KFIDTTSKF_					0	0	0		ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF;ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.8661071658134	3	362.865847	1085.57571	0.25514	9.2582E-05	0.58308	0.00021158	0.83822	0.00030416	362.86598725860034	24.298	0.30891	25.539	25.424	25.732	1.241					23	9	3	0	0	0	0.23535	1	10161	10161		21.59	11.44	1	7602400			12736	1263	6417	6446	15389	15389					0.03634609757477847
KFIDTTSKF	9	Unmodified	_KFIDTTSKF_					0	0	0		ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF;ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7957031130791	2	543.795132	1085.57571	0.58777	0.00031962	0.30673	0.0001668	0.8945	0.00048642	543.7952788381859	23.963	0.40116	25.647	25.414	25.815	1.6845					46	12	5	0	0	0	3.0412E-05	3	9993	9947;9993;10033		162.31	102.24	1	25940000			12737	1263	6417	6446	15390;15391;15392	15391					0.03634609757477847
KFIDTTSKF	9	Unmodified	_KFIDTTSKF_					0	0	0		ENST00000417615.1_1_14:99439218-99439536:-|nuORF;ENST00000473638.5_1_22:39708982-39709710:-|nuORF;ENSG00000100316|ENST00000216146|RPL3;ENSG00000140986|ENST00000268661|RPL3L	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	ENST00000417615.1_1_14:99439218-99439536:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.8659545779228	3	362.865847	1085.57571	0.20253	7.3491E-05	0.24665	8.9499E-05	0.44918	0.00016299	362.86587676336245	23.964	0.37254	25.648	25.443	25.815	1.6845					31	11	4	0	0	0	0.044893	1	9995	9995		57.249	39.806	1	8840700			12738	1263	6417	6446	15393	15393					0.03634609757477847
KFIFNEDDFK	10	Unmodified	_KFIFNEDDFK_					0	0	0			REV__ENST00000427240.1_1_1:39997676-40011451:-|nuORF	REV__ENST00000427240.1_1_1:39997676-40011451:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8819763064384	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.453	1	18.453	17.953	18.953	0								0	0	0	0.66068	1	7669	7669		3.3196	0	1		+		12739	13005	6418	6447	15394	15394					-0.009546375306854316
KFKIRFPLY	9	Unmodified	_KFKIRFPLY_					0	0	0			REV__tr|A0A7D6ZF48|A0A7D6ZF48_9CLOTAminotransferaseclassV-foldPLP-dependentenzymeOS=ClostridiumintestinaleOX=36845GN=HZF06_13465PE=4SV=1	REV__tr|A0A7D6ZF48|A0A7D6ZF48_9CLOTAminotransferaseclassV-foldPLP-dependentenzymeOS=ClostridiumintestinaleOX=36845GN=HZF06_13465PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3712646365166	2	606.368601	1210.72265	2.4321	0.0014747	1.3443	0.00081512	3.7764	0.0022899	606.3695591643277	91.803	0.34681	91.803	91.693	92.04	0					24	10	3	0	0	0	0.85019	1	38368	38368		0.52476	0	1	1757200	+		12740	15627	6419	6448	15395	15395					0.12571751433097234
KFKRKIPWIII	11	Unmodified	_KFKRKIPWIII_					0	0	0		SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	721.4745361208916	2	721.473932	1440.93331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.14	1	107.3	106.8	107.8	0.15781								0	0	0	0.63775	1	46010	46010		0.35063	0.35063	1				12741	15968	6420	6449	15396	15396					0.23048208755130872
KFKRKIPWIII	11	Unmodified	_KFKRKIPWIII_					0	0	0		SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	SORCS3|p.N1154I|1|0.69|ENSG00000156395|chr10:105262348-105262348|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	721.4736816287041	2	721.473932	1440.93331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.11	1	107.27	106.77	107.77	0.16174								0	0	0	0.63775	1	45944	45944		0.35063	0.043601	1				12742	15968	6420	6449	15397	15397					0.23048208755130872
KFLDPITGTF	10	Unmodified	_KFLDPITGTF_					0	0	0		nc|ENSG00000138592|P40818-2|USP8;ENSG00000138592|ENST00000307179|USP8	nc|ENSG00000138592|P40818-2|USP8	nc|ENSG00000138592|P40818-2|USP8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8135864138603	2	569.810782	1137.60701	3.0167	0.001719	0.59844	0.000341	3.6152	0.00206	569.8110566530436	61.502	0.33702	62.92	62.744	63.081	1.4177					27	10	3	0	0	0	0.046747	2	25764	25764;25810		114.19	61.918	1	3151800			12743	2835	6421	6450	15398;15399	15398					0.04371182791555839
KFLDPITGTF	10	Unmodified	_KFLDPITGTF_					0	0	0		nc|ENSG00000138592|P40818-2|USP8;ENSG00000138592|ENST00000307179|USP8	nc|ENSG00000138592|P40818-2|USP8	nc|ENSG00000138592|P40818-2|USP8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8120605349541	2	569.810782	1137.60701	2.6743	0.0015238	-0.024661	-1.4052E-05	2.6496	0.0015098	569.8111025128806	60.983	0.45954	62.948	62.79	63.25	1.9653					37	14	4	0	0	0	0.062279	2	25612	25567;25612		117.76	59.082	1	3312700			12744	2835	6421	6450	15400;15401	15401					0.04371182791555839
KFLHKNLPH	9	Unmodified	_KFLHKNLPH_					0	0	0			REV__nc|ENSG00000036549|Q8IYH5-3|ZZZ3	REV__nc|ENSG00000036549|Q8IYH5-3|ZZZ3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3312255740166	2	567.33255	1132.65055	1.3238	0.00075101	-0.62804	-0.00035631	0.69572	0.0003947	567.332543221086	71.211	0.63255	71.211	71.035	71.668	0					35	19	2	0	0	0	0.83753	1	29810	29810		1.8442	0.19162	1	2119600	+		12745	8584	6422	6451	15402	15402					0.08952837079368692
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.3019286990166	3	454.967465	1361.88056	1.1979	0.00054501	0.79568	0.00036201	1.9936	0.00090702	454.96790670899094	27.663	0.48541	27.663	27.289	27.775	0					28	15	3	0	0	0	0.89803	1	11518	11518		0.69767	0.24315	1	1307700	+		12746	13890	6423	6452	15403	15403					0.21409927420631902
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4774658083916	4	341.477418	1361.88056	0.44326	0.00015136	-0.86652	-0.0002959	-0.42326	-0.00014453	341.47698019483954	26.14	1.2117	26.401	25.837	27.049	0.26173					152	39	5	0	0	0	0.89803	1	10793	10793		0.15932	0.064481	1	25697000	+		12747	13890	6423	6452	15404	15404					0.21409927420631902
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4770690798759	4	341.477418	1361.88056	0.56529	0.00019304	0.37416	0.00012777	0.93945	0.0003208	341.4774933030518	28.288	1.3083	28.559	28.243	29.551	0.27119					128	42	4	0	0	0	0.89803	1	11712	11712		0.15932	0.064481	1	8660700	+		12748	13890	6423	6452	15405	15405					0.21409927420631902
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.4774047732353	4	341.477418	1361.88056	0.12265	4.1881E-05	-0.56839	-0.00019409	-0.44574	-0.00015221	341.4771281856021	24.829	1.2974	26.07	25.547	26.845	1.241					158	42	6	0	0	0	0.89803	1	10279	10279		0.15932	0.01943	1	32549000	+		12749	13890	6423	6452	15406	15406					0.21409927420631902
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.3029052615166	3	454.967465	1361.88056	0.80772	0.00036749	0.59793	0.00027204	1.4056	0.00063952	455.30245705759967	24.268	0.34768	25.953	25.815	26.163	1.6845					22	11	3	0	0	0	0.89803	2	10116	10116;10172		0.15932	0.064481	1	991780	+		12750	13890	6423	6452	15407;15408	15407					0.21409927420631902
KFLKRMKKKR	10	Unmodified	_KFLKRMKKKR_					0	0	0			REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	REV__ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4771606326103	4	341.477418	1361.88056	0.1021	3.4866E-05	-1.0901	-0.00037224	-0.98797	-0.00033737	341.47695092934583	24.582	1.4887	26.266	25.568	27.057	1.6845					182	49	5	0	0	0	0.89803	1	10138	10138		0.15932	0.01943	1	37959000	+		12751	13890	6423	6452	15409	15409					0.21409927420631902
KFLLKFRK	8	Unmodified	_KFLLKFRK_					0	0	0		sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5747253298759	3	360.57445	1078.70152	-0.27624	-9.9606E-05	2.0434	0.00073678	1.7671	0.00063718	360.57504615525505	20.735	0.80494	21.86	21.414	22.219	1.1254					87	26	5	0	0	0	0.89152	1	8706	8706		1.6526	0	1	10923000			12752	16004	6424	6453	15410	15410					0.16531786124232895
KFLLVSFIL	9	Unmodified	_KFLLVSFIL_					0	0	0		ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	ENSG00000112796|ENST00000371383|ENPP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3490478396416	2	540.346803	1078.67905	4.1445	0.0022395	0.40333	0.00021794	4.5478	0.0024574	540.3473072102238	90.205	0.63131	91.61	91.368	92	1.4045					43	19	3	0	0	0	0.22154	1	37947	37947		30.637	8.8899	1	1760200			12753	1796	6425	6454	15411	15411					0.14286141935963315
KFLNKVIFW	9	Unmodified	_KFLNKVIFW_					0	0	0			REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8565551638603	2	597.855327	1193.6961	3.4736	0.0020767	0.94402	0.00056439	4.4176	0.0026411	597.8557675871057	73.822	2.6041	75.14	73.992	76.597	1.318					144	83	3	0	0	0	0.82604	1	31183	31183		2.3027	0	1	2054400	+		12754	15104	6426	6455	15412	15412					0.10700062541764055
KFLNKVIFW	9	Unmodified	_KFLNKVIFW_					0	0	0			REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8579589724541	2	597.855327	1193.6961	2.5642	0.001533	2.2485	0.0013442	4.8126	0.0028772	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.76456	4	32165	31765;32165;32224;32273		4.756	0.81161	1	10594000	+		12755	15104	6426	6455	15413;15414;15415;15416	15414					0.10700062541764055
KFLNKVIFW	9	Unmodified	_KFLNKVIFW_					0	0	0			REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8574706912041	2	597.855327	1193.6961	2.8708	0.0017163	0.81424	0.0004868	3.6851	0.0022031	597.8559668340692	73.631	2.3111	75.427	74.402	76.713	1.7962					133	73	3	0	0	0	0.82604	1	30920	30920		2.3027	0	1	1933100	+		12756	15104	6426	6455	15417	15417					0.10700062541764055
KFLNKVIFW	9	Unmodified	_KFLNKVIFW_					0	0	0			REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	REV__tr|A0A553SPT4|A0A553SPT4_NIACIprolinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8580810427666	2	597.855327	1193.6961	2.7426	0.0016397	1.429	0.00085433	4.1716	0.002494	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.76456	1	32036	32036		4.756	0.81161	1	9838100	+		12757	15104	6426	6455	15418	15418					0.10700062541764055
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	360.5749084353447	3	360.57445	1078.70152	-1.7192	-0.00061992	2.6612	0.00095957	0.94198	0.00033965	360.57532748332096	22.65	0.38124	22.65	22.369	22.75	0					41	12	4	0	0	0	0.89152	2	9328	9328;9379		1.6526	0	1	32277000	+		12758	11435	6427	6456	15419;15420	15419					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.5746642947197	3	360.57445	1078.70152	0.4203	0.00015155	0.9613	0.00034662	1.3816	0.00049817	360.574684710464	21.693	0.89447	21.916	21.453	22.347	0.223					85	29	4	0	0	0	0.89152	3	8897	8897;8946;9003		1.6526	0	1	9772800	+		12759	11435	6427	6456	15421;15422;15423	15421					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.5744811892509	3	360.57445	1078.70152	0.51762	0.00018664	0.72441	0.0002612	1.242	0.00044784	360.57452967746053	23.475	0.4965	23.708	23.474	23.971	0.23306					39	15	4	0	0	0	0.89185	2	9787	9787;9835		0.45834	0	1	1966000	+		12760	11435	6427	6456	15424;15425	15424					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.5750305056572	3	360.57445	1078.70152	0.5435	0.00019597	0.89271	0.00032189	1.4362	0.00051786	360.57469862730244	23.97	0.58433	24.212	23.949	24.533	0.24251					57	18	4	0	0	0	0.89185	3	9963	9963;10012;10053		0.45834	0	1	8165400	+		12761	11435	6427	6456	15426;15427;15428	15426					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5748779177666	3	360.57445	1078.70152	-0.27624	-9.9606E-05	2.0434	0.00073678	1.7671	0.00063718	360.57504615525505	20.735	0.80494	21.86	21.414	22.219	1.1254					87	26	5	0	0	0	0.89152	3	8553	8507;8553;8606		1.6526	0	1	10923000	+		12762	11435	6427	6456	15429;15430;15431	15430					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5749694705009	3	360.57445	1078.70152	-0.052553	-1.8949E-05	2.2615	0.00081544	2.209	0.00079649	360.57513677814586	22.379	0.34868	23.556	23.35	23.699	1.177					30	10	4	0	0	0	0.89185	2	9335	9335;9382		0.45834	0	1	2508100	+		12763	11435	6427	6456	15432;15433	15432					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5749084353447	3	360.57445	1078.70152	-0.00055855	-2.014E-07	0.67288	0.00024262	0.67232	0.00024242	360.5746615934345	22.719	0.82838	23.934	23.736	24.565	1.2145					61	26	4	0	0	0	0.89185	1	9463	9463		0.45834	0	1	10559000	+		12764	11435	6427	6456	15434	15434					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5747558474541	3	360.57445	1078.70152	0.032295	1.1645E-05	1.0628	0.00038321	1.0951	0.00039485	360.57472167988277	20.079	0.9906	21.602	21.108	22.098	1.5237					102	32	4	0	0	0	0.89152	4	8215	8215;8264;8316;8363		1.6526	0	1	12921000	+		12765	11435	6427	6456	15435;15436;15437;15438	15435					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5747863650322	3	360.57445	1078.70152	0.10585	3.8165E-05	1.1495	0.00041448	1.2553	0.00045264	360.57477136732564	21.887	0.29643	23.503	23.377	23.674	1.6158					24	9	3	0	0	0	0.89185	2	9115	9115;9163		0.45834	0	1	4300800	+		12766	11435	6427	6456	15439;15440	15439					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5749694705009	3	360.57445	1078.70152	0.12215	4.4045E-05	0.57266	0.00020649	0.69482	0.00025053	360.57452961139836	22.23	0.60458	23.846	23.674	24.278	1.6158					57	19	4	0	0	0	0.89185	1	9245	9245		0.45834	0	1	11472000	+		12767	11435	6427	6456	15441	15441					0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	360.57445	1078.70152	-0.00055855	-2.014E-07	0.67288	0.00024262	0.67232	0.00024242	360.5746615934345	22.719	0.82838	23.934	23.736	24.565	1.2145	0.10429	3.7362E-05	NaN	0.45834	61	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10559000	+		12768	11435	6427	6456							0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	360.57445	1078.70152	-0.052553	-1.8949E-05	2.2615	0.00081544	2.209	0.00079649	360.57513677814586	22.379	0.34868	23.556	23.35	23.699	1.177	0.026607	0.00066934	NaN	0.45834	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2508100	+		12769	11435	6427	6456							0.16531786124232895
KFLRFKKL	8	Unmodified	_KFLRFKKL_					0	0	0			REV__ENSG00000184924|ENST00000328379|PTRHD1	REV__ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	360.57445	1078.70152	0.10585	3.8165E-05	1.1495	0.00041448	1.2553	0.00045264	360.57477136732564	21.887	0.29643	23.503	23.377	23.674	1.6158	-0.026607	-0.00053356	NaN	0.45834	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4300800	+		12770	11435	6427	6456							0.16531786124232895
KFLVFRFLFH	10	Unmodified	_KFLVFRFLFH_					0	0	0			REV__ENST00000409371.7_1_4:6202075-6202225:-|nuORF	REV__ENST00000409371.7_1_4:6202075-6202225:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9354125857353	3	451.932526	1352.77575	3.1235	0.0014116	0.95337	0.00043086	4.0768	0.0018425	451.9330334707084	85.264	1.3791	85.516	84.814	86.193	0.25227					106	43	3	0	0	0	0.89803	1	35470	35470		0.15932	0.01943	1	3258700	+		12771	12912	6428	6457	15442	15442					0.11347129215732821
KFMGVQMETF	10	Unmodified	_KFMGVQMETF_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;UNC45A-IQGAP1|2|fusion;UNC45A-IQGAP1|1|fusion;ENST00000561086.1_1_15:91040446-91043337:+|nuORF	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.2863647341728	2	609.288302	1216.56205	0.65918	0.00040163	-0.70259	-0.00042808	-0.043414	-2.6452E-05	609.2877667437589	51.421	0.32684	52.815	52.621	52.948	1.3938					25	10	3	0	0	0	0.1353	2	21554	21500;21554		57.722	24.155	1	3763300			12772	2927	6429	6458	15443;15444	15444					-0.0375670733762945
KFMGVQMETF	10	Unmodified	_KFMGVQMETF_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;UNC45A-IQGAP1|2|fusion;UNC45A-IQGAP1|1|fusion;ENST00000561086.1_1_15:91040446-91043337:+|nuORF	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.2883788943291	2	609.288302	1216.56205	0.08467	5.1588E-05	-0.14283	-8.7027E-05	-0.058164	-3.5439E-05	609.2879388422735	50.794	0.30664	52.769	52.606	52.912	1.9753					30	9	4	0	0	0	0.043952	2	21269	21269;21320		82.529	40.69	1	3324100			12773	2927	6429	6458	15445;15446	15445					-0.0375670733762945
KFNEDRCF	8	Unmodified	_KFNEDRCF_					0	0	0		ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	ENSG00000172938|ENST00000309106|MRGPRD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.7422363162041	2	529.739834	1057.46511	2.551	0.0013514	2.3361	0.0012375	4.8871	0.0025889	529.7405298632202	73.862	0.35182	74.187	74.008	74.36	0.32494					24	10	4	0	0	0	0.87431	1	30906	30906		12.532	0.89125	1	1412100			12774	4262	6430	6459	15447	15447					-0.06131933502410902
KFNLVTLYK	9	Unmodified	_KFNLVTLYK_					0	0	0		ENST00000398576.6_1_13:46701596-46701683:-|nuORF	ENST00000398576.6_1_13:46701596-46701683:-|nuORF	ENST00000398576.6_1_13:46701596-46701683:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3394653201103	2	563.336967	1124.65938	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.447	1	46.447	45.947	46.947	0								0	0	0	0.42693	1	19419	19419		4.3292	0	1				12775	6325	6431	6460	15448	15448					0.10203765925189145
KFNPVSFTW	9	Unmodified	_KFNPVSFTW_					0	0	0		ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2910034060478	2	563.290017	1124.56548	2.9569	0.0016656	0.19256	0.00010847	3.1495	0.0017741	563.2904274463665	61.805	0.66389	63.222	63.02	63.683	1.4177					58	20	4	0	0	0	0.0066739	3	25924	25874;25924;25965		115.69	47.611	1	6276700			12776	2239	6432	6461	15449;15450;15451	15450					0.008180468229056714
KFNPVSFTW	9	Unmodified	_KFNPVSFTW_					0	0	0		ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	ENSG00000124702|ENST00000326974|KLHDC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2912475466728	2	563.290017	1124.56548	2.2542	0.0012698	1.1167	0.000629	3.3708	0.0018988	563.2907349638751	61.239	0.72299	63.204	63.004	63.727	1.9647					54	22	4	0	0	0	0.029061	2	25712	25665;25712		88.954	51.665	1	7800900			12777	2239	6432	6461	15452;15453	15453					0.008180468229056714
KFRGMDMT	8	Unmodified	_KFRGMDMT_					0	0	0			REV__ENST00000492989.1_1_1:32505129-32508163:+|nuORF	REV__ENST00000492989.1_1_1:32505129-32508163:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1572448611259	3	329.157979	984.452107	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.926	1	34.204	33.704	34.704	1.2782								0	0	0	1.0178	1	13808	13808		0.45834	0	1		+		12778	13443	6433	6462	15454	15454					-0.04074087886158395
KFRGMDMT	8	Unmodified	_KFRGMDMT_					0	0	0			REV__ENST00000492989.1_1_1:32505129-32508163:+|nuORF	REV__ENST00000492989.1_1_1:32505129-32508163:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	329.1573058962822	3	329.157979	984.452107	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.519	1	39.339	38.839	39.839	1.8202								0	0	0	1.0178	1	15739	15739		0.45834	0	1		+		12779	13443	6433	6462	15455	15455					-0.04074087886158395
KFRISILLIFI	11	Unmodified	_KFRISILLIFI_					0	0	0			REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4773132205009	4	341.477246	1361.87988	0.44327	0.00015136	-0.36468	-0.00012453	0.078588	2.6836E-05	341.47698019483954	26.14	1.2117	26.401	25.837	27.049	0.26173					152	39	5	0	0	0	1.0388	2	10844	10844;10885		0.50596	0.34663	1	25697000	+		12780	15617	6434	6463	15456;15457	15456					0.21341411252615217
KFRISILLIFI	11	Unmodified	_KFRISILLIFI_					0	0	0			REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4776183962822	4	341.477246	1361.87988	0.56529	0.00019304	0.87601	0.00029914	1.4413	0.00049217	341.4774933030518	28.288	1.3083	28.559	28.243	29.551	0.27119					128	42	4	0	0	0	1.0388	1	11760	11760		0.50596	0.34663	1	8660700	+		12781	15617	6434	6463	15458	15458					0.21341411252615217
KFRISILLIFI	11	Unmodified	_KFRISILLIFI_					0	0	0			REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.4773742556572	4	341.477246	1361.87988	0.12265	4.1881E-05	-0.066541	-2.2722E-05	0.056107	1.9159E-05	341.4771281856021	24.829	1.2974	26.07	25.547	26.845	1.241					158	42	6	0	0	0	1.0388	1	10328	10328		0.50596	0.34663	1	32549000	+		12782	15617	6434	6463	15459	15459					0.21341411252615217
KFRISILLIFI	11	Unmodified	_KFRISILLIFI_					0	0	0			REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	REV__tr|A0A7D6W3S7|A0A7D6W3S7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4772216677666	4	341.477246	1361.87988	0.1021	3.4866E-05	-0.58823	-0.00020087	-0.48613	-0.000166	341.47695092934583	24.582	1.4887	26.266	25.568	27.057	1.6845					182	49	5	0	0	0	1.0388	1	10188	10188		0.50596	0.34663	1	37959000	+		12783	15617	6434	6463	15460	15460					0.21341411252615217
KFRVKRVKR	9	Unmodified	_KFRVKRVKR_					0	0	0		L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	608.9106323122978	2	608.909291	1215.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.838	1	15.968	15.468	16.468	0.13022								0	0	0	0.42693	1	6573	6573		0.52476	0.12405	1				12784	7756	6435	6464	15461	15461					0.20475871915687094
KFSKGCDGCKY	11	Unmodified	_KFSKGCDGCKY_					0	0	0			REV__ZNF394|p.N362D|1|0.06|ENSG00000160908|chr7:99494131-99494131|T/C|missense_variant	REV__ZNF394|p.N362D|1|0.06|ENSG00000160908|chr7:99494131-99494131|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.5234557986259	3	412.523098	1234.54746	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.272	1	30.048	29.548	30.548	1.7754								0	0	0	0.63775	1	11837	11837		0.45452	0	1		+		12785	15941	6436	6465	15462	15462					-0.06042779485756
KFSPRPLKF	9	Unmodified	_KFSPRPLKF_					0	0	0		BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant;BRWD1|p.V1635Wfs*6|1|0.05|ENSG00000185658|chr21:39199514-39199514|A/-|frameshift_variant;BRWD1|p.Q1709Mfs*18|1|0.17|ENSG00000185658|chr21:39199286-39199292|GCTCTGG/-|frameshift_variant;nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant	BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	373.8941223025322	3	373.89396	1118.66005	0.34157	0.00012771	-0.25205	-9.4242E-05	0.089514	3.3469E-05	373.8938167576077	23.095	1.4174	24.31	24.072	25.489	1.2145					104	45	4	0	0	0	0.098163	1	9669	9669		45.74	15.899	1	9617900			12786	108	6437	6466	15463	15463					0.10546605364902462
KFSPRPLKF	9	Unmodified	_KFSPRPLKF_					0	0	0		BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant;BRWD1|p.V1635Wfs*6|1|0.05|ENSG00000185658|chr21:39199514-39199514|A/-|frameshift_variant;BRWD1|p.Q1709Mfs*18|1|0.17|ENSG00000185658|chr21:39199286-39199292|GCTCTGG/-|frameshift_variant;nc|ENSG00000185658|Q9NSI6-3|BRWD1;ENSG00000185658|ENST00000342449|BRWD1;nc|ENSG00000185658|Q9NSI6|BRWD1	BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant	BRWD1|p.E1531Dfs*2|1|0.06|ENSG00000185658|chr21:39200379-39200380|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.8936645388603	3	373.89396	1118.66005	0.22396	8.3739E-05	-0.095153	-3.5577E-05	0.12881	4.8162E-05	373.89386994013296	22.672	1.6424	24.323	24.016	25.659	1.6511					129	53	4	0	0	0	0.15456	1	9458	9458		35.612	15.198	1	9931600			12787	108	6437	6466	15464	15464					0.10546605364902462
KFSSELGMIF	10	Unmodified	_KFSSELGMIF_					0	0	0		ENSG00000178234|ENST00000430044|GALNT11;nc|ENSG00000178234|Q8NCW6-2|GALNT11	ENSG00000178234|ENST00000430044|GALNT11	ENSG00000178234|ENST00000430044|GALNT11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.7962524294853	2	579.796817	1157.57908	1.7532	0.0010165	-1.8268	-0.0010592	-0.073544	-4.2641E-05	579.7954560619489	66.653	0.21812	68.042	67.903	68.121	1.3888					12	6	2	0	0	0	0.84024	1	27972	27972		7.9102	1.187	1	741420			12788	4480	6438	6467	15465	15465					0.006595365398425201
KFTKRFLLL	9	Unmodified	_KFTKRFLLL_					0	0	0			REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2540466189384	3	389.253376	1164.7383	1.2146	0.00047278	0.742	0.00028883	1.9566	0.00076161	389.25365922436606	31.78	0.98593	32.07	31.816	32.802	0.29086					111	31	5	0	0	0	0.84531	1	13267	13267		1.1933	1.1933	1	56743000	+		12789	13596	6439	6468	15466	15466					0.16252037950130216
KFTKRFLLL	9	Unmodified	_KFTKRFLLL_					0	0	0			REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2547485232353	3	389.253376	1164.7383	0.20055	7.8065E-05	2.1715	0.00084525	2.372	0.00092332	389.254251958102	29.959	0.52049	31.241	31.012	31.532	1.2825					67	16	5	0	0	0	0.847	1	12585	12585		0.96228	0	1	79085000	+		12790	13596	6439	6468	15467	15467					0.16252037950130216
KFTKRFLLL	9	Unmodified	_KFTKRFLLL_					0	0	0			REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	REV__ENST00000515330.5_1_4:113345070-113346839:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2541992068291	3	389.253376	1164.7383	0.58944	0.00022944	0.73391	0.00028568	1.3234	0.00051512	389.25366376432305	29.512	0.45564	31.31	31.082	31.538	1.7987					59	14	5	0	0	0	0.84531	1	12396	12396		1.1933	0.12188	1	79877000	+		12791	13596	6439	6468	15468	15468					0.16252037950130216
KFTSELEE	8	Unmodified	_KFTSELEE_					0	0	0		ENSG00000116991|ENST00000674635|SIPA1L2	ENSG00000116991|ENST00000674635|SIPA1L2	ENSG00000116991|ENST00000674635|SIPA1L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1612121462822	3	328.16244	981.465492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.991	1	23.991	23.491	24.491	0								0	0	0	1.0178	1	10005	10005		0.45834	0	1				12792	1994	6440	6469	15469	15469					-0.025982353015592707
KFTSELEE	8	Unmodified	_KFTSELEE_					0	0	0		ENSG00000116991|ENST00000674635|SIPA1L2	ENSG00000116991|ENST00000674635|SIPA1L2	ENSG00000116991|ENST00000674635|SIPA1L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1609985232353	3	328.16244	981.465492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.117	1	24.117	23.617	24.617	0								0	0	0	1.0178	1	10058	10058		0.45834	0	1				12793	1994	6440	6469	15470	15470					-0.025982353015592707
KFVDCFWQY	9	Unmodified	_KFVDCFWQY_					0	0	0		L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|93|1|anti-sense	L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|93|1|anti-sense	L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|93|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.5234863162041	3	412.523315	1234.54812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.808	1	32.808	32.308	33.308	0								0	0	0	0.42693	1	13746	13746		0.26902	0	1				12794	7772	6441	6470	15471	15471					-0.05977616774407579
KFWFKRYLYGL	11	Unmodified	_KFWFKRYLYGL_					0	0	0			REV__nc|ENSG00000249715|A0AVI2-4|FER1L5	REV__nc|ENSG00000249715|A0AVI2-4|FER1L5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.6185790896416	3	507.618607	1519.83399	2.0401	0.0010356	-0.95473	-0.00048464	1.0854	0.00055096	507.6175963092587	44.819	1.2697	45.146	44.575	45.844	0.32674					127	42	5	0	0	0	1.0362	1	18827	18827		1.3296	0.11481	1	11957000	+		12795	11948	6442	6471	15472	15472					0.09486766070381236
KFWGCCSA	8	Unmodified	_KFWGCCSA_					0	0	0			REV__ENST00000478400.3_1_3:93699213-93707534:+|nuORF	REV__ENST00000478400.3_1_3:93699213-93707534:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1285278201103	3	301.12802	900.362229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.21	1	103.27	102.77	103.77	0.059502								0	0	0	1.0178	1	43260	43260		0.45834	0	1		+		12796	10946	6443	6472	15473	15473					-0.09193717494724751
KFYCFFQCCK	10	Unmodified	_KFYCFFQCCK_					0	0	0			REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	658.7841674685478	2	658.784872	1315.55519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.945	1	48.945	48.445	49.445	0								0	0	0	0.65894	1	20436	20436		6.2058	2.6093	1		+		12797	14283	6444	6473	15474	15474					-0.08996343489843639
KFYCFFQCCK	10	Unmodified	_KFYCFFQCCK_					0	0	0			REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	658.7856933474541	2	658.784872	1315.55519	1.6728	0.001102	-1.7661	-0.0011635	-0.093287	-6.1456E-05	658.7841393469955	46.631	0.95788	46.961	46.709	47.667	0.33034					46	31	2	0	0	0	0.85604	1	19522	19522		6.2058	1.3088	1	644800	+		12798	14283	6444	6473	15475	15475					-0.08996343489843639
KFYCFFQCCK	10	Unmodified	_KFYCFFQCCK_					0	0	0			REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	REV__L1ME4a_dup15683|chr7:135159667-135159953:+|1.2796223879496305|0.4304620133998951|1.57|429.0|13|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	658.7852661013603	2	658.784872	1315.55519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.242	1	32.523	32.023	33.023	1.2813								0	0	0	0.65894	1	13107	13107		6.2058	0	1		+		12799	14283	6444	6473	15476	15476					-0.08996343489843639
KFYRGEFRWLW	11	Unmodified	_KFYRGEFRWLW_					0	0	0		nc|ENSG00000152620|Q4G0N4-3|NADK2;nc|ENSG00000152620|Q4G0N4-2|NADK2;ENSG00000152620|ENST00000381937|NADK2	nc|ENSG00000152620|Q4G0N4-3|NADK2	nc|ENSG00000152620|Q4G0N4-3|NADK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	794.4132568240166	2	794.414603	1586.81465	0.91226	0.00072471	-2.909	-0.002311	-1.9968	-0.0015863	794.4126034839788	77.614	0.3282	79.366	79.167	79.495	1.7514					24	10	3	0	0	0	1.0366	1	32533	32533		1.1933	0	1	4248400			12800	3331	6445	6474	15477	15477					0.0447180977946573
KGAAIFFEF	9	Unmodified	_KGAAIFFEF_					0	0	0		nc|ENSG00000186063|Q96BJ3-2|AIDA;ENST00000514881.1_1_4:159199390-159199825:+|nuORF;ENST00000456674.1_1_2:11448506-11449064:+|nuORF;ENSG00000186063|ENST00000340020|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2737914919853	2	515.273835	1028.53312	2.4766	0.0012761	-2.0348	-0.0010485	0.44183	0.00022766	515.273009256932	69.444	0.35966	70.81	70.674	71.033	1.3657					26	11	3	0	0	0	0.44512	1	29179	29179		18.146	1.2041	1	2326100			12801	4777	6446	6475	15478	15478					0.01999259419903865
KGAAIFFEF	9	Unmodified	_KGAAIFFEF_					0	0	0		nc|ENSG00000186063|Q96BJ3-2|AIDA;ENST00000514881.1_1_4:159199390-159199825:+|nuORF;ENST00000456674.1_1_2:11448506-11449064:+|nuORF;ENSG00000186063|ENST00000340020|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	nc|ENSG00000186063|Q96BJ3-2|AIDA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	515.273835	1028.53312	1.6292	0.00083948	-1.5932	-0.00082095	0.035959	1.8529E-05	515.2732260480959	68.819	0.45078	70.672	70.497	70.948	1.853	-0.068653	0.0003034	NaN	18.146	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2488800			12802	4777	6446	6475							0.01999259419903865
KGARVGTI	8	Unmodified	_KGARVGTI_					0	0	0		ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	801.4968749880791	1	801.494113	800.486836	2.7354	0.0021924	2.1091	0.0016905	4.8446	0.0038829	801.4952467389763	108.36	0.37373	108.52	108.37	108.75	0.15781					31	19	2	0	0	0	0.89178	1	46809	46809		0.69038	0	1	25554000			12803	2327	6447	6476	15479	15479					0.07861239308488166
KGAVGRAKRPP	11	Unmodified	_KGAVGRAKRPP_					0	0	0			REV__ENST00000393630.7_1_12:62860647-62877954:+|nuORF	REV__ENST00000393630.7_1_12:62860647-62877954:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8553954958916	2	568.854181	1135.69381	2.2108	0.0012576	-0.22364	-0.00012722	1.9872	0.0011304	568.8540865699008	88.409	0.8358	88.409	88.119	88.955	0					87	26	5	0	0	0	1.039	2	36867	36867;37039		0.30703	0.30703	1	105930000	+		12804	12813	6448	6477	15480;15481	15480					0.1313902685665198
KGCLPLREL	9	Unmodified	_KGCLPLREL_					0	0	0			REV__ENSG00000122679|ENST00000242249|RAMP3	REV__ENSG00000122679|ENST00000242249|RAMP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.5348388552666	3	343.535555	1027.58484	0.13798	4.7402E-05	-1.527	-0.00052457	-1.389	-0.00047717	343.53491883473754	24.267	0.79776	25.508	25.114	25.912	1.241					68	25	4	0	0	0	0.77876	1	10225	10225		4.1895	0	1	4511600	+		12805	9611	6449	6478	15482	15482					0.07214679842149962
KGDFLLFI	8	Unmodified	_KGDFLLFI_					0	0	0		tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1995422244072	2	476.778754	951.542954	1.9557	0.00093242	-0.37683	-0.00017967	1.5788	0.00075275	476.77894427375895	64.892	0.34187	66.8	66.596	66.938	1.9085					18	10	2	0	0	0	2.3239	1	27225	27225		1.6526	1.0511	1	1061600			12806	16466	6450	6479	15483	15483					0.06524447425283597
KGERKIRVQKL	11	Unmodified	_KGERKIRVQKL_					0	0	0			REV__ENST00000424408.6_1_6:112443358-112450212:-|nuORF	REV__ENST00000424408.6_1_6:112443358-112450212:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	339.2214233279228	4	339.471489	1353.85685	-0.56988	-0.00019346	-0.28652	-9.7264E-05	-0.8564	-0.00029072	339.4714449521729	31.439	0.33223	32.72	32.563	32.895	1.2813					20	10	2	0	0	0	0.14606	1	13163	13163		2.2527	1.143	1	1887300	+		12807	12991	6451	6480	15484	15484					0.19407785187831905
KGFKAHFFSD	10	Unmodified	_KGFKAHFFSD_					0	0	0		ENSG00000038295|ENST00000061240|TLL1;ENST00000354870.5_1_8:22035226-22069238:+|nuORF;BMP1|p.H749Qfs*3|1|0.09|ENSG00000168487|chr8:22206867-22206867|C/-|frameshift_variant;BMP1|p.H740Qfs*12|1|0.11|ENSG00000168487|chr8:22201915-22201915|C/-|frameshift_variant;ENST00000520982.5_1_8:22034120-22069238:+|nuORF;ENSG00000168487|ENST00000306385|BMP1	ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	395.2334777712822	3	395.201341	1182.58219	0.27057	0.00010693	0.044357	1.753E-05	0.31493	0.00012446	395.2014023017805	46.657	0.18845	46.657	46.536	46.725	0					9	5	2	0	0	0	0.12552	1	19464	19464		3.0723	0.78949	1	423320			12808	653	6452	6481	15485	15485					-0.0017945229117231065
KGFPHVIYA	9	Unmodified	_KGFPHVIYA_					0	0	0		ENST00000589706.1_1_18:48573554-48575699:+|nuORF;ENST00000590722.2_1_18:48573416-48579019:+|nuORF;SMAD4|p.D415Efs*20|1|0.08|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant;ENSG00000141646|ENST00000342988|SMAD4	ENST00000589706.1_1_18:48573554-48575699:+|nuORF	ENST00000589706.1_1_18:48573554-48575699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2869140505791	2	516.287277	1030.56	1.1352	0.00058608	0.32851	0.0001696	1.4637	0.00075569	516.2870769736531	29.294	0.36248	30.576	30.433	30.796	1.2825					17	11	2	0	0	0	0.49082	2	12294	12294;12347		15.847	10.617	1	1000800			12809	2972	6453	6482	15486;15487	15486					0.04594368031075646
KGFPHVIYA	9	Unmodified	_KGFPHVIYA_					0	0	0		ENST00000589706.1_1_18:48573554-48575699:+|nuORF;ENST00000590722.2_1_18:48573416-48579019:+|nuORF;SMAD4|p.D415Efs*20|1|0.08|ENSG00000141646|chr18:51067121-51067124|AGAC/-|frameshift_variant;ENSG00000141646|ENST00000342988|SMAD4	ENST00000589706.1_1_18:48573554-48575699:+|nuORF	ENST00000589706.1_1_18:48573554-48575699:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	516.287277	1030.56	0.98123	0.0005066	-0.45046	-0.00023257	0.53076	0.00027403	516.2869012636712	28.776	0.41931	30.574	30.359	30.779	1.7987	-0.00097135	-0.00047028	NaN	15.847	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1059800			12810	2972	6453	6482							0.04594368031075646
KGGAARIS	8	Unmodified	_KGGAARIS_					0	0	0			REV__ENST00000431180.5_1_3:47122459-47155398:-|nuORF	REV__ENST00000431180.5_1_3:47122459-47155398:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2292053103447	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.454	1	94.325	93.825	94.825	0.87176								0	0	0	1.0178	1	39330	39330		2.3027	1.6124	1		+		12811	11326	6454	6483	15488	15488					0.05100379757323026
KGGAGKLP	8	Unmodified	_KGGAGKLP_					0	0	0			REV__nc|ENSG00000186868|P10636|MAPT	REV__nc|ENSG00000186868|P10636|MAPT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	364.2261840701103	2	364.226688	726.438824	-0.36416	-0.00013264	-0.11243	-4.095E-05	-0.47659	-0.00017359	364.2265519868218	61.583	0.4106	61.583	61.331	61.741	0					28	12	3	0	0	0	0.89051	1	25673	25673		2.3027	0	1	4447600	+		12812	11516	6455	6484	15489	15489					0.06466165388405898
KGGAGRRP	8	Unmodified	_KGGAGRRP_					0	0	0			REV__ENST00000530316.5_3_11:57194174-57194590:-|nuORF	REV__ENST00000530316.5_3_11:57194174-57194590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7393676638603	2	399.738286	797.462019	1.8209	0.0007279	-0.564	-0.00022545	1.2569	0.00050245	399.73811130518754	67.593	0.90329	67.916	67.218	68.121	0.32269					51	29	3	0	0	0	0.89051	1	28341	28341		2.3027	0	1	4823200	+		12813	13700	6456	6485	15490	15490					0.05518604225744639
KGGAGRRP	8	Unmodified	_KGGAGRRP_					0	0	0			REV__ENST00000530316.5_3_11:57194174-57194590:-|nuORF	REV__ENST00000530316.5_3_11:57194174-57194590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7398254275322	2	399.738286	797.462019	1.5825	0.00063259	-0.37043	-0.00014807	1.2121	0.00048451	399.738355195234	66.216	0.83221	68.105	67.509	68.341	1.8889					55	26	3	0	0	0	0.89051	2	27681	27681;27784		2.3027	0	1	4282600	+		12814	13700	6456	6485	15491;15492	15491					0.05518604225744639
KGGAKGAS	8	Unmodified	_KGGAKGAS_					0	0	0			REV__ENSG00000097007|ENST00000318560|ABL1	REV__ENSG00000097007|ENST00000318560|ABL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.1928893923759	2	338.192845	674.371138	1.475	0.00049883	0.41235	0.00013945	1.8873	0.00063829	338.1928553719513	54.653	0.33737	54.974	54.865	55.202	0.32088					27	14	3	0	0	0	0.89051	1	22885	22885		2.3027	0	1	5258000	+		12815	8940	6457	6486	15493	15493					0.02092715457615668
KGGAKGAS	8	Unmodified	_KGGAKGAS_					0	0	0			REV__ENSG00000097007|ENST00000318560|ABL1	REV__ENSG00000097007|ENST00000318560|ABL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	338.192845	674.371138	1.475	0.00049883	0.41235	0.00013945	1.8873	0.00063829	338.1928553719513	54.653	0.33737	54.974	54.865	55.202	0.32088	-0.11056	-0.00012262	NaN	2.3027	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5258000	+		12816	8940	6457	6486							0.02092715457615668
KGGAKPLA	8	Unmodified	_KGGAKPLA_					0	0	0			REV__ENSG00000113430|ENST00000231357|IRX4	REV__ENSG00000113430|ENST00000231357|IRX4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1013671755791	2	371.234513	740.454474	-0.68319	-0.00025362	-2.7566	-0.0010233	-3.4398	-0.001277	371.2334369494436	71.844	0.37955	71.844	71.668	72.047	0					20	11	2	0	0	0	2.3239	1	29983	29983		0.69038	0	1	2333000	+		12817	9385	6458	6487	15494	15494					0.07386451905449576
KGGAKPLA	8	Unmodified	_KGGAKPLA_					0	0	0			REV__ENSG00000113430|ENST00000231357|IRX4	REV__ENSG00000113430|ENST00000231357|IRX4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017333865166	2	371.234513	740.454474	1.6712	0.00062041	-3.5119	-0.0013037	-1.8407	-0.00068334	371.2329250404067	72.345	0.42659	73.675	73.486	73.913	1.3297					21	13	2	0	0	0	2.3239	1	30459	30459		0.69038	0	1	816140	+		12818	9385	6458	6487	15495	15495					0.07386451905449576
KGGAKPLA	8	Unmodified	_KGGAKPLA_					0	0	0			REV__ENSG00000113430|ENST00000231357|IRX4	REV__ENSG00000113430|ENST00000231357|IRX4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	371.234513	740.454474	1.5028	0.00055789	-3.8673	-0.0014357	-2.3645	-0.00087777	371.23279917558006	71.545	0.50937	71.869	71.622	72.132	0.32359	-0.053844	-0.00023006	NaN	0.69038	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1760200	+		12819	9385	6458	6487							0.07386451905449576
KGGAKPLA	8	Unmodified	_KGGAKPLA_					0	0	0			REV__ENSG00000113430|ENST00000231357|IRX4	REV__ENSG00000113430|ENST00000231357|IRX4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	371.234513	740.454474	2.3168	0.00086008	-5.6478	-0.0020967	-3.331	-0.0012366	371.23150963305676	71.994	0.45836	73.818	73.507	73.966	1.824	0.071316	-0.00076667	NaN	0.69038	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	774260	+		12820	9385	6458	6487							0.07386451905449576
KGGAKPLA	8	Unmodified	_KGGAKPLA_					0	0	0			REV__ENSG00000113430|ENST00000231357|IRX4	REV__ENSG00000113430|ENST00000231357|IRX4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	371.234513	740.454474	1.841	0.00068343	-4.9209	-0.0018268	-3.0799	-0.0011434	371.23208212377403	70.215	0.47586	72.053	71.784	72.26	1.8378	0.12987	-0.0010123	NaN	0.69038	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1392200	+		12821	9385	6458	6487							0.07386451905449576
KGGAKRRG	8	Unmodified	_KGGAKRRG_					0	0	0			REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2606078982353	2	415.259385	828.504218	2.0637	0.00085695	-0.58724	-0.00024386	1.4764	0.0006131	415.258852161957	79.846	0.47455	80.147	79.972	80.447	0.30047					25	14	2	0	0	0	0.89178	1	33377	33377		0.69038	0	1	941330	+		12822	12076	6459	6488	15496	15496					0.08310579634132864
KGGAKRRG	8	Unmodified	_KGGAKRRG_					0	0	0			REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	415.259385	828.504218	0.72049	0.00029919	0.14892	6.1841E-05	0.86941	0.00036103	415.25901166808666	79.993	0.58764	79.993	79.733	80.321	0	-0.20874	0.00047392	NaN	0.69038	20	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	510040	+		12823	12076	6459	6488							0.08310579634132864
KGGAKRRG	8	Unmodified	_KGGAKRRG_					0	0	0			REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	415.259385	828.504218	2.0637	0.00085695	-0.58724	-0.00024386	1.4764	0.0006131	415.258852161957	79.846	0.47455	80.147	79.972	80.447	0.30047	-0.054982	-0.00013748	NaN	0.69038	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	941330	+		12824	12076	6459	6488							0.08310579634132864
KGGAKRRG	8	Unmodified	_KGGAKRRG_					0	0	0			REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	REV__ENST00000219169.8_1_16:67880748-67899011:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	415.259385	828.504218	2.2179	0.000921	-0.67978	-0.00028229	1.5381	0.00063872	415.2588913456533	78.731	0.49559	80.466	80.165	80.66	1.735	0.26372	-0.00021434	NaN	0.69038	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	857660	+		12825	12076	6459	6488							0.08310579634132864
KGGALPPA	8	Unmodified	_KGGALPPA_					0	0	0		nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;TCOF1|p.V599Afs*29|1|0.09|ENSG00000070814|chr5:150375812-150375812|T/-|frameshift_variant;nc|ENSG00000070814|Q13428-5|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	355.7122070193291	2	355.713414	709.412274	1.7557	0.00062453	-3.3916	-0.0012064	-1.6359	-0.00058191	355.7122667858748	60.453	0.52407	61.873	61.597	62.121	1.4196					38	16	3	0	0	0	0.89051	1	25407	25407		2.3027	0	1	5771600			12826	862	6460	6489	15497	15497					0.04594476497084088
KGGALPPA	8	Unmodified	_KGGALPPA_					0	0	0		nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;TCOF1|p.V599Afs*29|1|0.09|ENSG00000070814|chr5:150375812-150375812|T/-|frameshift_variant;nc|ENSG00000070814|Q13428-5|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	355.713414	709.412274	1.7426	0.00061987	-4.0726	-0.0014487	-2.3299	-0.00082879	355.711953675857	61.405	0.55854	61.735	61.453	62.012	0.32974	-0.14303	-0.00016632	NaN	2.3027	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9219700			12827	862	6460	6489							0.04594476497084088
KGGALPPA	8	Unmodified	_KGGALPPA_					0	0	0		nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1;ENST00000515035.5_1_5:149748314-149754605:+|nuORF;TCOF1|p.V599Afs*29|1|0.09|ENSG00000070814|chr5:150375812-150375812|T/-|frameshift_variant;nc|ENSG00000070814|Q13428-5|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	nc|ENSG00000070814|Q13428-6|TCOF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	355.713414	709.412274	2.7164	0.00096626	-3.9642	-0.0014101	-1.2478	-0.00044385	355.71202848535387	60.061	0.53307	62.027	61.759	62.292	1.9653	0.14854	-8.9218E-05	NaN	2.3027	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7130900			12828	862	6460	6489							0.04594476497084088
KGGAPKAL	8	Unmodified	_KGGAPKAL_					0	0	0		ENST00000493340.5_1_7:139476988-139482520:+|nuORF	ENST00000493340.5_1_7:139476988-139482520:+|nuORF	ENST00000493340.5_1_7:139476988-139482520:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1016113162041	2	371.234513	740.454474	2.0593	0.00076448	-3.0762	-0.001142	-1.0169	-0.00037753	371.23241659466674	70.572	0.5428	71.925	71.679	72.222	1.3536					29	16	3	0	0	0	2.3239	1	29575	29575		0.69038	0	1	1423900			12829	6926	6461	6490	15498	15498					0.07386451905460945
KGGCGDPG	8	Unmodified	_KGGCGDPG_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.2231628298759	2	345.647413	689.280274	1.5206	0.00052559	-3.3492	-0.0011577	-1.8287	-0.00063207	345.64748938619766	80.689	0.27963	80.98	80.747	81.026	0.29056					11	8	2	0	0	0	2.3239	1	33705	33705		2.3027	1.6124	1	339830			12830	379	6462	6491	15499	15499					-0.07679496582159118
KGGCGDPG	8	Unmodified	_KGGCGDPG_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.2230407595634	2	345.647413	689.280274	1.6735	0.00057845	0.49606	0.00017146	2.1696	0.00074991	345.6494164137968	61.13	0.37443	61.46	61.203	61.578	0.32974					16	11	2	0	0	0	2.3239	1	25627	25627		0.69038	0.69038	1	308000			12831	379	6462	6491	15500	15500					-0.07679496582159118
KGGCGDPG	8	Unmodified	_KGGCGDPG_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.6460449099541	2	345.647413	689.280274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.976	1	60.396	59.896	60.896	1.4196								0	0	0	1.0178	1	24724	24724		2.3027	1.6124	1				12832	379	6462	6491	15501	15501					-0.07679496582159118
KGGCKKLH	8	Unmodified	_KGGCKKLH_					0	0	0			REV__ENSG00000198924|ENST00000361384|DCLRE1A	REV__ENSG00000198924|ENST00000361384|DCLRE1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7520019412041	2	435.752547	869.490542	1.4128	0.00061564	-1.2741	-0.00055519	0.13874	6.0454E-05	435.751903025503	64.36	0.73857	64.36	63.983	64.722	0					51	22	3	0	0	0	0.89051	2	26744	26744;26794		2.3027	0	1	3672300	+		12833	11756	6463	6492	15502;15503	15502					0.05057585810675391
KGGCPRLT	8	Unmodified	_KGGCPRLT_					0	0	0		ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2271606326103	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.83	1	35.129	34.629	35.629	0.29942								0	0	0	1.0178	1	14630	14630		2.3027	1.6124	1				12834	17369	6464	6493	15504	15504					0.021253065396649617
KGGCPRLT	8	Unmodified	_KGGCPRLT_					0	0	0		ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	ZNF592|p.S462Qfs*153|1|0.1|ENSG00000166716|chr15:84784057-84784058|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2285644412041	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.721	1	36.023	35.523	36.523	0.30197								0	0	0	1.0178	1	15014	15014		2.3027	1.5091	1				12835	17369	6464	6493	15505	15505					0.021253065396649617
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3691284060478	1	657.36785	656.360573	2.1329	0.0014021	-2.5654	-0.0016864	-0.43252	-0.00028432	657.3662977085744	56.157	0.34165	56.157	55.999	56.34	0					19	11	2	0	0	0	0.89178	1	23429	23429		0.69038	0	1	4933300	+		12836	10942	6465	6494	15506	15506					0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	657.3672973513603	1	657.36785	656.360573	2.0731	0.0013628	-1.3417	-0.00088201	0.73137	0.00048078	657.3667976657314	56.026	0.39148	56.347	56.139	56.531	0.32088					26	13	3	0	0	0	0.89008	1	23475	23475		2.5775	0	1	4546800	+		12837	10942	6465	6494	15507	15507					0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0698730349541	2	329.187563	656.360573	1.5463	0.00050902	-3.0147	-0.0009924	-1.4684	-0.00048338	329.18656103541525	56.026	0.39148	56.347	56.139	56.531	0.32088					25	13	2	0	0	0	2.3239	1	23417	23417		0.69038	0	1	6693900	+		12838	10942	6465	6494	15508	15508					0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.0698425173759	2	329.187563	656.360573	0.27161	8.9411E-05	-1.4352	-0.00047243	-1.1635	-0.00038302	329.18686153450557	54.988	1.0656	56.393	55.867	56.932	1.4048					58	35	3	0	0	0	2.3239	1	23220	23220		0.69038	0	1	3945100	+		12839	10942	6465	6494	15509	15509					0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0695068240166	2	329.187563	656.360573	1.0716	0.00035275	-2.1116	-0.00069511	-1.04	-0.00034236	329.1866443950478	54.6	1.1034	56.568	56.001	57.105	1.9684					59	36	3	0	0	0	2.3239	1	22958	22958		0.69038	0	1	5078100	+		12840	10942	6465	6494	15510	15510					0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	657.36785	656.360573	2.1329	0.0014021	-2.5654	-0.0016864	-0.43252	-0.00028432	657.3662977085744	56.157	0.34165	56.157	55.999	56.34	0	-0.21069	-0.00052673	NaN	2.5775	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4933300	+		12841	10942	6465	6494							0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	657.36785	656.360573	2.0731	0.0013628	-1.3417	-0.00088201	0.73137	0.00048078	657.3667976657314	56.026	0.39148	56.347	56.139	56.531	0.32088	-0.020342	0.00027769	NaN	2.5775	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4546800	+		12842	10942	6465	6494							0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	657.36785	656.360573	1.3338	0.00087682	-1.5484	-0.0010178	-0.21453	-0.00014103	657.3665135555766	54.99	0.39981	56.395	56.211	56.611	1.4048	0.027005	0.00014185	NaN	2.5775	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2327300	+		12843	10942	6465	6494							0.01864732803176139
KGGGGGPK	8	Unmodified	_KGGGGGPK_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	657.36785	656.360573	1.611	0.001059	-1.7279	-0.0011358	-0.11683	-7.6803E-05	657.3664694158264	54.603	0.34369	56.572	56.379	56.722	1.9684	0.20403	2.3856E-05	NaN	2.5775	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2621000	+		12844	10942	6465	6494							0.01864732803176139
KGGGLAQA	8	Unmodified	_KGGGLAQA_					0	0	0		nc|ENSG00000168237|Q8IVS8-5|GLYCTK;GLYCTK|p.L288Kfs*8|1|0.05|ENSG00000168237|chr3:52292414-52292415|-/CAAG|frameshift_variant;ENST00000489173.1_1_3:52325707-52327139:+|nuORF;nc|ENSG00000168237|Q8IVS8-4|GLYCTK;nc|ENSG00000168237|Q8IVS8-3|GLYCTK;ENSG00000168237|ENST00000436784|GLYCTK	nc|ENSG00000168237|Q8IVS8-5|GLYCTK	nc|ENSG00000168237|Q8IVS8-5|GLYCTK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2010681033134	2	351.20067	700.386788	1.9466	0.00068364	-3.4503	-0.0012117	-1.5037	-0.0005281	351.1996147812751	59.919	0.50711	60.248	59.966	60.473	0.32809					37	16	3	0	0	0	0.89178	1	25054	25054		0.69038	0	1	5248000			12845	4022	6466	6495	15511	15511					0.02461001974654664
KGGGLGRH	8	Unmodified	_KGGGLGRH_					0	0	0			REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	2	391.225011	780.435469	-0.1146	-4.4835E-05	2.6	0.0010172	2.4853	0.00097233	391.22620824060436	67.748	1.4984	67.748	66.735	68.233	0					80	47	3	0	0	0	2.3239	1	28362	28362		0.69038	0.69038	1	2897000	+		12846	12607	6467	6496	15512	15512					0.0364691533441146
KGGGLGRH	8	Unmodified	_KGGGLGRH_					0	0	0			REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2258178591728	2	391.225011	780.435469	1.5538	0.00060788	0.32548	0.00012733	1.8793	0.00073522	391.2251703842945	68.505	0.91016	68.827	68.153	69.064	0.32224					54	28	3	0	0	0	0.89051	1	28655	28655		2.3027	1.6124	1	12823000	+		12847	12607	6467	6496	15513	15513					0.0364691533441146
KGGGLGRH	8	Unmodified	_KGGGLGRH_					0	0	0			REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	REV__ENST00000361972.8_1_10:7214115-7217992:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	391.225011	780.435469	1.7458	0.00068299	0.988	0.00038653	2.7338	0.0010695	391.22555694812485	67.586	0.96614	67.909	67.188	68.154	0.32269	-0.020504	-0.00066128	NaN	0.69038	64	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2760700	+		12848	12607	6467	6496							0.0364691533441146
KGGGRLPRC	9	Unmodified	_KGGGRLPRC_					0	0	0		ENST00000355496.9_1_19:49370876-49371476:-|nuORF	ENST00000355496.9_1_19:49370876-49371476:-|nuORF	ENST00000355496.9_1_19:49370876-49371476:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1807739138603	3	315.179994	942.518153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.19	1	46.519	46.019	47.019	0.32899								0	0	0	0.42693	1	19384	19384		1.0715	0.61312	1				12849	5979	6468	6497	15514	15514					0.04459489070904965
KGGGSRVL	8	Unmodified	_KGGGSRVL_					0	0	0		ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	ENSG00000248713|ENST00000511828|C4orf54	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	387.1514465212822	2	387.235045	772.455536	2.3269	0.00090105	-2.4712	-0.00095695	-0.14437	-5.5906E-05	387.2346210775797	83.528	3.0436	83.798	82.234	85.277	0.27029					169	97	3	0	0	0	2.3239	1	35021	35021		0	0	1	2572500			12850	5370	6469	6498	15515	15515					0.06020666274366704
KGGGSSKS	8	Unmodified	_KGGGSSKS_					0	0	0		ENSG00000164695|ENST00000297265|CHMP4C	ENSG00000164695|ENST00000297265|CHMP4C	ENSG00000164695|ENST00000297265|CHMP4C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	354.1891052126884	2	354.18776	706.360967	1.5721	0.00055682	2.6378	0.00093428	4.2099	0.0014911	354.1886892545391	62.974	0.46867	63.303	63.067	63.536	0.32974					31	14	3	0	0	0	0.89178	2	26355	26355;26400		0.69038	0	1	3178300			12851	3793	6470	6499	15516;15517	15516					-0.003958922676133625
KGGHLRTG	8	Unmodified	_KGGHLRTG_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2383605837822	2	413.238119	824.461684	1.5009	0.00062023	-0.85831	-0.00035469	0.64258	0.00026554	413.23797841867287	70.48	0.42828	72.318	72.104	72.532	1.8378					31	13	3	0	0	0	0.89051	1	29574	29574		2.3027	0.24298	1	4427700	+		12852	9826	6471	6500	15518	15518					0.04243184505901354
KGGILKSL	8	Unmodified	_KGGILKSL_					0	0	0		tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2708618044853	2	408.271096	814.527639	0.47182	0.00019263	-1.2797	-0.00052246	-0.80786	-0.00032983	408.27051670739047	78.424	0.4097	78.424	78.22	78.629	0					27	12	3	0	0	0	0.89178	1	32611	32611		0.69038	0	1	2458100			12853	16700	6472	6501	15519	15519					0.11295580628075186
KGGILKSL	8	Unmodified	_KGGILKSL_					0	0	0		tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2711364626884	2	408.271096	814.527639	1.9695	0.0008041	-2.324	-0.00094884	-0.3545	-0.00014473	408.27006895008947	78.223	0.44693	78.532	78.291	78.738	0.30933					31	13	3	0	0	0	0.89178	1	32661	32661		0.69038	0	1	3713900			12854	16700	6472	6501	15520	15520					0.11295580628075186
KGGILKSL	8	Unmodified	_KGGILKSL_					0	0	0		tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2709838747978	2	408.271096	814.527639	2.2154	0.00090448	-2.2916	-0.00093558	-0.076176	-3.11E-05	408.2702674235888	77.309	0.44559	78.59	78.346	78.791	1.2809					26	13	3	0	0	0	0.89178	1	32433	32433		0.69038	0	1	1896400			12855	16700	6472	6501	15521	15521					0.11295580628075186
KGGILKSL	8	Unmodified	_KGGILKSL_					0	0	0		tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2703124880791	2	408.271096	814.527639	1.7671	0.00072144	-2.3224	-0.00094815	-0.55531	-0.00022672	408.27009232320574	76.951	0.44917	78.718	78.482	78.931	1.7672					26	13	3	0	0	0	0.89178	1	32258	32258		0.69038	0	1	1726300			12856	16700	6472	6501	15522	15522					0.11295580628075186
KGGILVIPRN	10	Unmodified	_KGGILVIPRN_					0	0	0		ENSG00000166509|ENST00000299642|CLEC3A	ENSG00000166509|ENST00000299642|CLEC3A	ENSG00000166509|ENST00000299642|CLEC3A	MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2281066775322	3	356.229231	1065.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.14	1	37.445	36.945	37.945	0.30497								0	0	0	0.66068	1	15619	15619		3.3196	0.82116	1				12857	3909	6473	6502	15523	15523					0.13565703876543012
KGGILVIPRN	10	Unmodified	_KGGILVIPRN_					0	0	0		ENSG00000166509|ENST00000299642|CLEC3A	ENSG00000166509|ENST00000299642|CLEC3A	ENSG00000166509|ENST00000299642|CLEC3A	MSMS	GG20161007_CRH_Patient100_W632_01	3	356.2281982302666	3	356.229231	1065.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.172	1	37.449	36.949	37.949	1.2762								0	0	0	0.66068	1	15185	15185		3.3196	0.82116	1				12858	3909	6473	6502	15524	15524					0.13565703876543012
KGGKGIVR	8	Unmodified	_KGGKGIVR_					0	0	0			REV__chr17:49046021-49046260|218|15.17|0.61|4.64|+|0|IGF2BP1,IGF2BP1|1	REV__chr17:49046021-49046260|218|15.17|0.61|4.64|+|0|IGF2BP1,IGF2BP1|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	407.7685729861259	2	407.766512	813.518471	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.187	1	63.516	63.016	64.016	0.32974								0	0	0	1.0178	1	26472	26472		2.3027	0	1		+		12859	8274	6474	6503	15525	15525					0.10425232062414125
KGGKGNAK	8	Unmodified	_KGGKGNAK_					0	0	0		tr|A0A7D6VTU1|A0A7D6VTU1_9CLOTGTPaseObgOS=ClostridiumintestinaleOX=36845GN=obgEPE=3SV=1	tr|A0A7D6VTU1|A0A7D6VTU1_9CLOTGTPaseObgOS=ClostridiumintestinaleOX=36845GN=obgEPE=3SV=1	tr|A0A7D6VTU1|A0A7D6VTU1_9CLOTGTPaseObgOS=ClostridiumintestinaleOX=36845GN=obgEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2289916872978	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.991	1	90.047	89.547	90.547	1.0562								0	0	0	1.0178	1	37510	37510		2.3027	0	1				12860	16930	6475	6504	15526	15526					0.05100379757323026
KGGKGPGP	8	Unmodified	_KGGKGPGP_					0	0	0		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	349.2022582888603	2	349.203213	696.391873	-0.96512	-0.00033702	-2.2642	-0.00079066	-3.2293	-0.0011277	349.20243142480956	59.054	0.44373	59.054	58.846	59.29	0					25	13	3	0	0	0	0.89178	1	24629	24629		0.69038	0	1	4440700			12861	389	6476	6505	15527	15527					0.0315330583728155
KGGKGPGP	8	Unmodified	_KGGKGPGP_					0	0	0		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.2007629275322	2	349.203213	696.391873	-0.65646	-0.00022924	-4.0218	-0.0014044	-4.6783	-0.0016337	349.20181554693846	58.063	0.30827	59.481	59.353	59.661	1.4181					16	12	2	0	0	0	0.89178	1	24329	24329		0.69038	0	1	4990400			12862	389	6476	6505	15528	15528					0.0315330583728155
KGGKGPGP	8	Unmodified	_KGGKGPGP_					0	0	0		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	349.203213	696.391873	2.0801	0.00072639	-6.5465	-0.0022861	-4.4664	-0.0015597	349.2008464709311	59.023	0.37808	59.349	59.087	59.465	0.32554	-0.065937	-0.00066401	NaN	0.69038	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6144700			12863	389	6476	6505							0.0315330583728155
KGGKGVPP	8	Unmodified	_KGGKGVPP_					0	0	0			REV__ENSG00000171450|ENST00000302625|CDK5R2	REV__ENSG00000171450|ENST00000302625|CDK5R2	MSMS	GG20161007_CRH_Patient100_A02_01	1	370.2261230349541	2	370.226688	738.438824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	103.95	103.45	104.45	0								0	0	0	1.0178	1	43771	43771		0.69038	0	1		+		12864	11024	6477	6506	15529	15529					0.059141653884125844
KGGKNPRI	8	Unmodified	_KGGKNPRI_					0	0	0		ENST00000521475.1_2_8:18942155-18942239:-|nuORF	ENST00000521475.1_2_8:18942155-18942239:-|nuORF	ENST00000521475.1_2_8:18942155-18942239:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2711669802666	2	435.269419	868.524284	2.5299	0.0011012	0.37247	0.00016213	2.9023	0.0012633	435.2694616265397	83.153	0.46797	84.341	84.142	84.61	1.1879					26	14	2	0	0	0	0.89051	1	34921	34921		2.3027	0.4585	1	1580900			12865	7084	6478	6507	15530	15530					0.08476330574092117
KGGKNPRIR	9	Unmodified	_KGGKNPRIR_					0	0	0		ENST00000521475.1_2_8:18942155-18942239:-|nuORF	ENST00000521475.1_2_8:18942155-18942239:-|nuORF	ENST00000521475.1_2_8:18942155-18942239:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.1996948122978	3	342.549075	1024.6254	-0.052421	-1.7957E-05	-1.7475	-0.0005986	-1.7999	-0.00061656	342.5480623640963	20.522	0.18251	22.096	21.997	22.18	1.5748					7	5	2	0	0	0	0.11909	1	8542	8542		2.4985	0.84587	1	268220			12866	7084	6479	6508	15531	15531					0.11406782276776539
KGGKNRRIF	9	Unmodified	_KGGKNRRIF_					0	0	0			REV__ENST00000465585.1_1_7:107796889-107818537:-|nuORF	REV__ENST00000465585.1_1_7:107796889-107818537:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.2218200564384	3	359.220958	1074.64105	2.3057	0.00082824	-2.5036	-0.00089935	-0.19795	-7.1109E-05	359.2202841355761	86.024	0.51894	86.276	86.037	86.556	0.25227					44	16	4	0	0	0	0.847	2	35938	35938;35982		0.96228	0	1	8638200	+		12867	8900	6480	6509	15532;15533	15532					0.1067106879381754
KGGKNRRIF	9	Unmodified	_KGGKNRRIF_					0	0	0			REV__ENST00000465585.1_1_7:107796889-107818537:-|nuORF	REV__ENST00000465585.1_1_7:107796889-107818537:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	359.220958	1074.64105	2.4685	0.00088675	-2.9715	-0.0010674	-0.50298	-0.00018068	359.2200254469921	84.956	0.38522	86.553	86.341	86.727	1.5962	0.11317	-0.00098582	NaN	0.96228	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6444700	+		12868	8900	6480	6509							0.1067106879381754
KGGKNRSKS	9	Unmodified	_KGGKNRSKS_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MSMS	GG20161007_CRH_Patient100_W632_01	3	321.1915771365166	3	321.189435	960.546476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.595	1	98.822	98.322	99.322	0.22776								0	0	0	0.42693	1	41509	41509		0.96228	0.50394	1				12869	4158	6481	6510	15534	15534					0.06462510251856202
KGGKNWLIDME	11	Unmodified	_KGGKNWLIDME_					0	0	0			REV__tr|A0A7D6ZSK5|A0A7D6ZSK5_9CLOTDUF3788domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16185PE=4SV=1	REV__tr|A0A7D6ZSK5|A0A7D6ZSK5_9CLOTDUF3788domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8898803591728	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.314	1	95.437	94.937	95.937	0.12331								0	0	0	0.63775	1	39885	39885		0.40827	0	1		+		12870	15710	6482	6511	15535	15535					0.010571113457899628
KGGKNWLIDME	11	Unmodified	_KGGKNWLIDME_					0	0	0			REV__tr|A0A7D6ZSK5|A0A7D6ZSK5_9CLOTDUF3788domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16185PE=4SV=1	REV__tr|A0A7D6ZSK5|A0A7D6ZSK5_9CLOTDUF3788domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8914672732353	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.83	1	112.88	112.38	113.38	0.044189								0	0	0	0.63775	1	48617	48617		0.40827	0	1		+		12871	15710	6482	6511	15536	15536					0.010571113457899628
KGGKRGRG	8	Unmodified	_KGGKRGRG_					0	0	0			REV__ENST00000561309.1_1_15:65677198-65678348:-|nuORF	REV__ENST00000561309.1_1_15:65677198-65678348:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2509338259697	2	408.25156	814.488568	0.36392	0.00014857	0.91222	0.00037242	1.2761	0.00052099	408.25165452507986	67.742	0.63171	67.742	67.349	67.98	0					32	19	2	0	0	0	0.89051	2	28158	28158;28207		2.3027	0	1	2681800	+		12872	13899	6483	6512	15537;15538	15537					0.07390293117089186
KGGKRGRG	8	Unmodified	_KGGKRGRG_					0	0	0			REV__ENST00000561309.1_1_15:65677198-65678348:-|nuORF	REV__ENST00000561309.1_1_15:65677198-65678348:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2521545290947	2	408.25156	814.488568	1.6308	0.0006658	0.07358	3.0039E-05	1.7044	0.00069584	408.25143738117913	66.207	0.65449	68.096	67.687	68.341	1.8889					32	20	2	0	0	0	0.89051	1	27734	27734		2.3027	0	1	2214200	+		12873	13899	6483	6512	15539	15539					0.07390293117089186
KGGKSMAA	8	Unmodified	_KGGKSMAA_					0	0	0			REV__tr|A0A7D6VRN9|A0A7D6VRN9_9CLOTAcetyl-CoAhydrolase/transferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02260PE=3SV=1	REV__tr|A0A7D6VRN9|A0A7D6VRN9_9CLOTAcetyl-CoAhydrolase/transferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02260PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	375.2016479372978	2	375.202356	748.390159	-0.21787	-8.1746E-05	-1.8234	-0.00068413	-2.0412	-0.00076588	375.2016423417522	63.484	0.47253	63.484	63.24	63.713	0					23	14	2	0	0	0	0.89178	1	26509	26509		0.69038	0	1	1381500	+		12874	15417	6484	6513	15540	15540					0.005899287570173328
KGGKTLVEYQE	11	Unmodified	_KGGKTLVEYQE_					0	0	0		nc|ENSG00000139910|P51513-5|NOVA1;ENSG00000104967|ENST00000263257|NOVA2;ENSG00000139910|ENST00000539517|NOVA1	nc|ENSG00000139910|P51513-5|NOVA1	nc|ENSG00000139910|P51513-5|NOVA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.8910400271416	3	417.890832	1250.65067	0.75197	0.00031424	0.099369	4.1525E-05	0.85134	0.00035577	417.8908528599807	29.504	0.39814	30.787	30.614	31.012	1.2825					33	12	3	0	0	0	1.0224	1	12379	12379		2.4348	1.22	1	3552800			12875	1492	6485	6514	15541	15541					0.03536747498014847
KGGKTMAT	8	Unmodified	_KGGKTMAT_					0	0	0		ENST00000561918.1_1_16:57512562-57513515:-|nuORF	ENST00000561918.1_1_16:57512562-57513515:-|nuORF	ENST00000561918.1_1_16:57512562-57513515:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2147399783134	2	397.215463	792.416374	0.054481	2.1641E-05	-2.1136	-0.00083954	-2.0591	-0.0008179	397.21474426386453	67.632	0.44196	67.632	67.441	67.883	0					29	13	3	0	0	0	0.89178	1	28251	28251		0.69038	0	1	1154100			12876	7336	6486	6515	15542	15542					0.011861979284844892
KGGKWRPT	8	Unmodified	_KGGKWRPT_					0	0	0			REV__ENST00000444465.1_1_6:166401068-166401386:-|nuORF	REV__ENST00000444465.1_1_6:166401068-166401386:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1347839236259	3	310.515371	928.524284	2.9291	0.00090952	0.24139	7.4954E-05	3.1704	0.00098447	310.515439208865	93.592	0.19025	94.464	94.353	94.544	0.87176					6	5	2	0	0	0	2.3239	1	39366	39366		0.35063	0	1	141300	+		12877	13101	6487	6516	15543	15543					0.05716330574091444
KGGKWRPT	8	Unmodified	_KGGKWRPT_					0	0	0			REV__ENST00000444465.1_1_6:166401068-166401386:-|nuORF	REV__ENST00000444465.1_1_6:166401068-166401386:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	310.2232238650322	3	310.515371	928.524284	2.9096	0.00090346	1.597	0.00049589	4.5066	0.0013994	310.51591811700644	92.52	0.36068	93.456	93.309	93.67	0.93623					14	10	2	0	0	0	2.3239	1	39024	39024		0.35063	0	1	287070	+		12878	13101	6487	6516	15544	15544					0.05716330574091444
KGGLEPRRL	9	Unmodified	_KGGLEPRRL_					0	0	0		USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant;nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43;nc|ENSG00000154914|Q70EL4-2|USP43;nc|ENSG00000154914|Q70EL4-3|USP43	USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.1983825564384	3	342.545331	1024.61416	-0.041911	-1.4356E-05	1.9279	0.00066038	1.886	0.00064603	342.5461934044366	20.796	0.17351	22.371	22.263	22.437	1.5748					8	5	2	0	0	0	0.11909	1	8632	8632		2.4985	0.41248	1	741160			12879	3402	6488	6517	15545	15545					0.10283960182664487
KGGLGPVP	8	Unmodified	_KGGLGPVP_					0	0	0		ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2533752322197	2	362.721239	723.427924	2.2781	0.00082631	-4.4098	-0.0015995	-2.1317	-0.0007732	362.7199223372323	72.004	0.36435	73.828	73.601	73.966	1.824					18	11	2	0	0	0	2.3239	1	30203	30203		0.69038	0	1	1345800			12880	7410	6489	6518	15546	15546					0.055147630141391346
KGGLGPVP	8	Unmodified	_KGGLGPVP_					0	0	0		ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	362.721239	723.427924	-0.83255	-0.00030198	-5.0304	-0.0018246	-5.8629	-0.0021266	362.7197748652909	73.435	0.45673	73.435	73.216	73.673	0	-0.17953	3.8949E-05	NaN	0.69038	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719520			12881	7410	6489	6518							0.055147630141391346
KGGLGPVP	8	Unmodified	_KGGLGPVP_					0	0	0		ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	ENST00000575312.1_1_17:79669809-79669983:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	362.721239	723.427924	1.9823	0.00071901	-5.9246	-0.002149	-3.9424	-0.00143	362.7194382736083	73.256	0.47614	73.581	73.34	73.816	0.32494	-0.033974	-0.00060979	NaN	0.69038	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1361300			12882	7410	6489	6518							0.055147630141391346
KGGLKALE	8	Unmodified	_KGGLKALE_					0	0	0			REV__ENST00000265735.11_1_7:94285424-94285505:-|nuORF	REV__ENST00000265735.11_1_7:94285424-94285505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2510253787041	2	408.252903	814.491253	0.40402	0.00016494	-2.7273	-0.0011134	-2.3233	-0.00094849	408.25180433294366	66.852	0.3187	66.852	66.671	66.99	0					15	9	2	0	0	0	0.89051	1	27861	27861		2.3027	0	1	618660	+		12883	12221	6490	6519	15547	15547					0.07658703731374317
KGGLKALE	8	Unmodified	_KGGLKALE_					0	0	0			REV__ENST00000265735.11_1_7:94285424-94285505:-|nuORF	REV__ENST00000265735.11_1_7:94285424-94285505:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	408.252903	814.491253	0.40402	0.00016494	-2.7273	-0.0011134	-2.3233	-0.00094849	408.25180433294366	66.852	0.3187	66.852	66.671	66.99	0	-0.24861	6.1473E-05	NaN	2.3027	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618660	+		12884	12221	6490	6519							0.07658703731374317
KGGLRCTP	8	Unmodified	_KGGLRCTP_					0	0	0		ENST00000403496.6_1_1:32697415-32700590:-|nuORF;ENST00000423995.5_1_1:32697415-32700590:-|nuORF	ENST00000403496.6_1_1:32697415-32700590:-|nuORF	ENST00000403496.6_1_1:32697415-32700590:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2280761599541	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.955	1	29.234	28.734	29.734	1.2789								0	0	0	1.0178	1	11715	11715		0.69038	0	1				12885	6351	6491	6520	15548	15548					0.021253065396649617
KGGLTPLLL	9	Unmodified	_KGGLTPLLL_					0	0	0		nc|ENSG00000188877|Q6S8J7|POTEA;nc|ENSG00000188877|Q6S8J7-2|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2481872439384	3	304.535661	910.585153	-0.45282	-0.0001379	3.2545	0.00099111	2.8017	0.00085322	304.53661406674206	13.665	0.37405	13.765	13.56	13.934	0.09944					24	11	3	0	0	0	0.11944	1	5659	5659		0	0	1	1135400			12886	7957	6492	6521	15549	15549					0.1262842283365444
KGGLTPLLL	9	Unmodified	_KGGLTPLLL_					0	0	0		nc|ENSG00000188877|Q6S8J7|POTEA;nc|ENSG00000188877|Q6S8J7-2|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	-1.3454	-0.00040971	3.8646	0.0011769	2.5192	0.00076719	304.5368049022664	13.266	0.34352	13.992	13.789	14.133	0.72639	0.11773	0.00025598	NaN	0	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	851760			12887	7957	6492	6521							0.1262842283365444
KGGLTPLLL	9	Unmodified	_KGGLTPLLL_					0	0	0		nc|ENSG00000188877|Q6S8J7|POTEA;nc|ENSG00000188877|Q6S8J7-2|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	304.535661	910.585153	-0.55306	-0.00016843	3.6472	0.0011107	3.0941	0.00094226	304.5366856626962	13.039	0.36028	13.867	13.613	13.974	0.82789	-0.0077437	5.7366E-05	NaN	0	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1050100			12888	7957	6492	6521							0.1262842283365444
KGGLVAKL	8	Unmodified	_KGGLVAKL_					0	0	0			REV__L1TD1|p.Q103Sfs*3|1|0.23|ENSG00000240563|chr1:62206932-62206932|T/-|frameshift_variant	REV__L1TD1|p.Q103Sfs*3|1|0.23|ENSG00000240563|chr1:62206932-62206932|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2643920779228	2	393.265813	784.517074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.937	1	84.197	83.697	84.697	0.26083								0	0	0	1.0178	1	35108	35108		0.69038	0	1		+		12889	11918	6493	6522	15550	15550					0.11619597973640339
KGGLVLLKM	9	Unmodified	_KGGLVLLKM_					0	0	0			REV__tr|A0A553SMN8|A0A553SMN8_NIACIdTDP-4-dehydrorhamnosereductaseOS=NialliacirculansOX=1397GN=CEQ21_22930PE=3SV=1	REV__tr|A0A553SMN8|A0A553SMN8_NIACIdTDP-4-dehydrorhamnosereductaseOS=NialliacirculansOX=1397GN=CEQ21_22930PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2074462771416	3	320.208779	957.604509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.638	1	50.638	50.138	51.138	0								0	0	0	0.42693	1	21122	21122		1.0715	0.67075	1		+		12890	15029	6494	6523	15551	15551					0.12401055852910758
KGGLVLLKM	9	Unmodified	_KGGLVLLKM_					0	0	0			REV__tr|A0A553SMN8|A0A553SMN8_NIACIdTDP-4-dehydrorhamnosereductaseOS=NialliacirculansOX=1397GN=CEQ21_22930PE=3SV=1	REV__tr|A0A553SMN8|A0A553SMN8_NIACIdTDP-4-dehydrorhamnosereductaseOS=NialliacirculansOX=1397GN=CEQ21_22930PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2075683474541	3	320.208779	957.604509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.24	1	60.24	59.74	60.74	0								0	0	0	0.42693	1	25123	25123		1.0715	0.67075	1		+		12891	15029	6494	6523	15552	15552					0.12401055852910758
KGGMKVAG	8	Unmodified	_KGGMKVAG_					0	0	0			REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2149230837822	2	374.212724	746.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.941	1	74.266	73.766	74.766	0.32494								0	0	0	1.0178	1	30931	30931		0.69038	0	1		+		12892	12379	6495	6524	15553	15553					0.027545191366925792
KGGMKVAG	8	Unmodified	_KGGMKVAG_					0	0	0			REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2126342654228	2	374.212724	746.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.129	1	74.454	73.954	74.954	0.32494								0	0	0	1.0178	1	31008	31008		0.69038	0	1		+		12893	12379	6495	6524	15554	15554					0.027545191366925792
KGGMKVAG	8	Unmodified	_KGGMKVAG_					0	0	0			REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	REV__ENST00000314134.3_1_11:45825971-45826406:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2129699587822	2	374.212724	746.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.383	1	74.708	74.208	75.208	0.32464								0	0	0	1.0178	1	31112	31112		0.69038	0	1		+		12894	12379	6495	6524	15555	15555					0.027545191366925792
KGGPAGPA	8	Unmodified	_KGGPAGPA_					0	0	0			REV__nc|ENSG00000168542|P02461-2|COL3A1	REV__nc|ENSG00000168542|P02461-2|COL3A1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.1799194216728	2	327.682114	653.349674	-2.2842	-0.0007485	-3.545	-0.0011616	-5.8292	-0.0019101	327.6816895653801	97.462	0.18462	97.462	97.353	97.537	0					8	5	2	0	0	0	2.3239	1	40739	40739		0	0	1	1676300	+		12895	10916	6496	6525	15556	15556					0.009133304288866384
KGGPAGPA	8	Unmodified	_KGGPAGPA_					0	0	0			REV__nc|ENSG00000168542|P02461-2|COL3A1	REV__nc|ENSG00000168542|P02461-2|COL3A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	327.682114	653.349674	2.1096	0.00069128	-5.8624	-0.001921	-3.7528	-0.0012297	327.6806493483795	97.411	0.15943	97.501	97.399	97.559	0.090881	0.019936	-0.0002982	NaN	0	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1617200	+		12896	10916	6496	6525							0.009133304288866384
KGGPARNPV	9	Unmodified	_KGGPARNPV_					0	0	0			REV__L1MC1_dup7132|chr8:144750012-144750846:-|1.0695587535362288|0.4006023584430365|1.42|429.0|47|2|anti-sense	REV__L1MC1_dup7132|chr8:144750012-144750846:-|1.0695587535362288|0.4006023584430365|1.42|429.0|47|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2602416872978	2	448.259051	894.503549	2.9751	0.0013336	-0.66554	-0.00029834	2.3096	0.0010353	448.2588239438045	71.055	0.49245	72.397	71.99	72.482	1.3415					35	15	3	0	0	0	0.83753	1	29751	29751		1.8442	1.0506	1	6184900	+		12897	14278	6497	6526	15557	15557					0.05207740194418875
KGGPATPP	8	Unmodified	_KGGPATPP_					0	0	0		ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.7023803591728	2	362.703046	723.391539	-0.52175	-0.00018924	-1.0907	-0.00039559	-1.6124	-0.00058483	362.70267204976864	63.003	0.53283	63.003	62.707	63.24	0					38	16	3	0	0	0	0.89178	2	26260	26260;26309		0.69038	0	1	7328800			12898	4944	6498	6527	15558;15559	15558					0.01877886117415528
KGGPATPP	8	Unmodified	_KGGPATPP_					0	0	0		ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	2	362.703046	723.391539	-0.17905	-6.4941E-05	-4.1686	-0.001512	-4.3477	-0.0015769	362.7023397922333	89.028	0.50895	89.028	88.732	89.241	0					25	15	2	0	0	0	2.3239	1	37234	37234		0.69038	0	1	297350			12899	4944	6498	6527	15560	15560					0.01877886117415528
KGGPGKPK	8	Unmodified	_KGGPGKPK_					0	0	0			REV__ENSG00000247596|ENST00000305533|TWF2	REV__ENSG00000247596|ENST00000305533|TWF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1542541384697	2	384.739963	767.465373	-0.50912	-0.00019588	3.0197	0.0011618	2.5105	0.00096591	384.74124018000657	97.337	0.18588	97.337	97.197	97.383	0					9	5	2	0	0	0	2.3239	1	40645	40645		0	0	1	813180	+		12900	11941	6499	6528	15561	15561					0.07233854279741081
KGGPGKPK	8	Unmodified	_KGGPGKPK_					0	0	0			REV__ENSG00000247596|ENST00000305533|TWF2	REV__ENSG00000247596|ENST00000305533|TWF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1538574099541	2	384.739963	767.465373	2.679	0.0010307	-0.229	-8.8107E-05	2.45	0.0009426	384.7400089520401	97.228	0.1898	97.319	97.21	97.399	0.090881					8	5	2	0	0	0	2.3239	1	40687	40687		0	0	1	727490	+		12901	11941	6499	6528	15562	15562					0.07233854279741081
KGGPGLPL	8	Unmodified	_KGGPGLPL_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	369.1229125857353	2	369.729064	737.443575	2.111	0.00078049	-1.7479	-0.00064626	0.36304	0.00013423	369.72877035470884	60.04	1.2667	60.368	59.84	61.107	0.32809					86	40	3	0	0	0	2.3239	1	25427	25427		0.69038	0	1	4160600			12902	2308	6500	6529	15563	15563					0.06435049531171444
KGGPGLPL	8	Unmodified	_KGGPGLPL_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	369.729064	737.443575	-0.30522	-0.00011285	-2.3401	-0.00086521	-2.6453	-0.00097806	369.72811369993997	60.236	0.93857	60.236	59.827	60.765	0	-0.17458	0.00028139	NaN	0.69038	65	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4074800			12903	2308	6500	6529							0.06435049531171444
KGGPGLPL	8	Unmodified	_KGGPGLPL_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	369.729064	737.443575	1.1472	0.00042417	-3.294	-0.0012179	-2.1467	-0.0007937	369.727870446289	59.02	0.88982	60.439	60.036	60.926	1.4196	0.029082	-0.00042393	NaN	0.69038	38	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2199900			12904	2308	6500	6529							0.06435049531171444
KGGPGLPL	8	Unmodified	_KGGPGLPL_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	369.729064	737.443575	1.7046	0.00063023	-3.8378	-0.0014189	-2.1332	-0.0007887	369.7276154765279	58.629	0.79049	60.598	60.247	61.037	1.969	0.1875	-0.00082605	NaN	0.69038	42	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1721800			12905	2308	6500	6529							0.06435049531171444
KGGPGNRLRLK	11	Unmodified	_KGGPGNRLRLK_					0	0	0		ENST00000391998.3_1_19:53982667-53982754:+|nuORF	ENST00000391998.3_1_19:53982667-53982754:+|nuORF	ENST00000391998.3_1_19:53982667-53982754:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507812380791	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.556	1	20.615	20.115	21.115	1.0585								0	0	0	0.63775	1	8145	8145		0.45452	0	1				12906	6253	6501	6530	15564	15564					0.14134698402403956
KGGPGPPA	8	Unmodified	_KGGPGPPA_					0	0	0		ENST00000300835.8_2_16:30662428-30664408:+|nuORF;ENST00000568754.5_2_16:30662065-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	340.6889221072197	2	340.689939	679.365324	-1.241	-0.00042279	-1.9441	-0.00066233	-3.1851	-0.0010851	340.6891234749653	59.053	0.44373	59.053	58.846	59.29	0					32	13	3	0	0	0	0.89178	3	24595	24595;24641;24684		0.69038	0	1	5615700			12907	5757	6502	6531	15565;15566;15567	15565					0.012816169459483717
KGGPGPPA	8	Unmodified	_KGGPGPPA_					0	0	0		ENST00000300835.8_2_16:30662428-30664408:+|nuORF;ENST00000568754.5_2_16:30662065-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.6887390017509	2	340.689939	679.365324	1.1193	0.00038135	-3.1211	-0.0010633	-2.0017	-0.00068197	340.68806436280676	47.599	0.3188	48.981	48.792	49.111	1.3825					16	9	2	0	0	0	0.89178	1	19930	19930		0.69038	0	1	651070			12908	5757	6502	6531	15568	15568					0.012816169459483717
KGGPGPPA	8	Unmodified	_KGGPGPPA_					0	0	0		ENST00000300835.8_2_16:30662428-30664408:+|nuORF;ENST00000568754.5_2_16:30662065-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.6883422732353	2	340.689939	679.365324	-0.65357	-0.00022266	-3.479	-0.0011852	-4.1325	-0.0014079	340.6886757528233	58.049	0.30827	59.467	59.353	59.661	1.4181					17	12	2	0	0	0	0.89178	2	24327	24327;24372		0.69038	0	1	4340800			12909	5757	6502	6531	15569;15570	15569					0.012816169459483717
KGGPGPPA	8	Unmodified	_KGGPGPPA_					0	0	0		ENST00000300835.8_2_16:30662428-30664408:+|nuORF;ENST00000568754.5_2_16:30662065-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	ENST00000300835.8_2_16:30662428-30664408:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	340.689939	679.365324	1.9267	0.0006564	-3.7058	-0.0012625	-1.7791	-0.00060612	340.68804166920836	47.133	0.28349	49.109	48.966	49.25	1.976	0.063976	-0.00020454	NaN	0.69038	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	990930			12910	5757	6502	6531							0.012816169459483717
KGGPRARPR	9	Unmodified	_KGGPRARPR_					0	0	0			REV__nc|ENSG00000104907|Q9NXH9-2|TRMT1	REV__nc|ENSG00000104907|Q9NXH9-2|TRMT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2061950564384	3	332.20542	993.59443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.058	1	55.378	54.878	55.878	0.32088								0	0	0	0.42693	1	23054	23054		0.96228	0	1		+		12911	9157	6503	6532	15571	15571					0.0973762896255721
KGGPTAGL	8	Unmodified	_KGGPTAGL_					0	0	0			REV__ENST00000597150.5_1_2:97261350-97297069:-|nuORF	REV__ENST00000597150.5_1_2:97261350-97297069:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.7038757205009	2	350.703046	699.391539	1.4046	0.00049258	3.8774	0.0013598	5.282	0.0018524	350.7048781398125	39.93	0.34093	41.792	41.615	41.956	1.8624					14	10	2	0	0	0	0.89178	1	16760	16760		0.69038	0	1	615630	+		12912	9424	6504	6533	15572	15572					0.02981886117436261
KGGPVKID	8	Unmodified	_KGGPVKID_					0	0	0		nc|ENSG00000153827|Q14669-4|TRIP12;TRIP12-MFI2|1|fusion;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	407.2474243044853	2	407.245078	812.475603	2.8869	0.0011757	3.7314	0.0015196	6.6183	0.0026953	407.24668164794133	97.388	0.19157	97.479	97.367	97.559	0.090881					8	5	2	0	0	0	0.8873	1	40749	40749		4.3292	1.44	1	1537800			12913	3366	6505	6534	15573	15573					0.06186417214314588
KGGPVKID	8	Unmodified	_KGGPVKID_					0	0	0		nc|ENSG00000153827|Q14669-4|TRIP12;TRIP12-MFI2|1|fusion;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	407.245078	812.475603	0.10273	4.1838E-05	5.4588	0.0022231	5.5615	0.0022649	407.2472164759687	97.56	0.15294	97.56	97.477	97.63	0	0.04015	0.0009428	NaN	4.3292	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	865560			12914	3366	6505	6534							0.06186417214314588
KGGRASPM	8	Unmodified	_KGGRASPM_					0	0	0		ENST00000591750.1_1_19:11348808-11348976:-|nuORF	ENST00000591750.1_1_19:11348808-11348976:-|nuORF	ENST00000591750.1_1_19:11348808-11348976:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1802856326103	2	402.213255	802.411957	1.6507	0.00066395	2.7767	0.0011168	4.4275	0.0017808	402.2138930360465	68.505	0.27826	68.827	68.689	68.967	0.32224					12	8	2	0	0	0	2.3239	1	28695	28695		0	0	1	1063200			12915	7489	6506	6535	15574	15574					0.0028473350558897437
KGGRCWRF	8	Unmodified	_KGGRCWRF_					0	0	0		ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	MSMS	GG20161007_CRH_Patient100_A02_02	2	337.1775085330009	3	337.176473	1008.50759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.218	1	94.363	93.863	94.863	0.14493								0	0	0	1.0178	1	39433	39433		0.40072	0.16487	1				12916	5446	6507	6536	15575	15575					0.003675064164781361
KGGRCWRF	8	Unmodified	_KGGRCWRF_					0	0	0		ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	ENSG00000271447|ENST00000605424|MMP28	MSMS	GG20161007_CRH_Patient100_A02_02	2	337.1783630251884	3	337.176473	1008.50759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.435	1	94.58	94.08	95.08	0.14493								0	0	0	1.0178	1	39525	39525		0.40072	0.16487	1				12917	5446	6507	6536	15576	15576					0.003675064164781361
KGGRILSG	8	Unmodified	_KGGRILSG_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2440978884697	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.779	1	92.779	92.279	93.279	0								0	0	0	1.0178	1	38776	38776		0.69038	0	1				12918	17132	6508	6537	15577	15577					0.06940952791433119
KGGRILSG	8	Unmodified	_KGGRILSG_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2437621951103	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.397	1	79.697	79.197	80.197	0.30047								0	0	0	1.0178	1	33197	33197		0.69038	0	1				12919	17132	6508	6537	15578	15578					0.06940952791433119
KGGRILSG	8	Unmodified	_KGGRILSG_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2437011599541	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.956	1	83.227	82.727	83.727	0.27029								0	0	0	1.0178	1	34693	34693		0.69038	0	1				12920	17132	6508	6537	15579	15579					0.06940952791433119
KGGRILSG	8	Unmodified	_KGGRILSG_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2444030642509	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.981	1	78.734	78.234	79.234	1.7537								0	0	0	1.0178	1	32287	32287		0.69038	0	1				12921	17132	6508	6537	15580	15580					0.06940952791433119
KGGRPRAA	8	Unmodified	_KGGRPRAA_					0	0	0			REV__ENST00000288607.2_1_7:1609485-1609569:-|nuORF	REV__ENST00000288607.2_1_7:1609485-1609569:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.7466613650322	2	406.746111	811.477669	1.9877	0.00080847	-0.56688	-0.00023058	1.4208	0.0005779	406.7461590804237	79.846	0.53662	80.147	79.942	80.478	0.30047					27	16	2	0	0	0	0.89178	1	33351	33351		0.69038	0	1	1355300	+		12922	12277	6509	6538	15581	15581					0.06438890742788317
KGGRPRAA	8	Unmodified	_KGGRPRAA_					0	0	0			REV__ENST00000288607.2_1_7:1609485-1609569:-|nuORF	REV__ENST00000288607.2_1_7:1609485-1609569:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.7471801638603	2	406.746111	811.477669	2.471	0.0010051	-0.11967	-4.8677E-05	2.3513	0.0009564	406.74618162330074	79.031	0.4697	80.298	80.034	80.504	1.2668					27	14	2	0	0	0	0.89178	1	33187	33187		0.69038	0	1	928300	+		12923	12277	6509	6538	15582	15582					0.06438890742788317
KGGRSKRA	8	Unmodified	_KGGRSKRA_					0	0	0		tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	tr|A0A7D6VNU4|A0A7D6VNU4_9CLOTCitratetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_14355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2659484744072	2	430.264668	858.514782	2.2418	0.00096455	1.0401	0.00044754	3.2819	0.0014121	430.26493230264106	69.476	0.69	71.329	70.856	71.546	1.853					40	21	3	0	0	0	0.89178	1	29139	29139		0.69038	0	1	2250200			12924	16745	6510	6539	15583	15583					0.07986562288556343
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2503845095634	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.2	1	80.2	79.7	80.7	0								0	0	0	1.0178	1	33397	33397		2.3027	0	1				12925	1495	6511	6540	15584	15584					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2520019412041	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.239	1	81.239	80.739	81.739	0								0	0	0	1.0178	1	33829	33829		2.5775	0	1				12926	1495	6511	6540	15585	15585					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2513305544853	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.735	1	82.735	82.235	83.235	0								0	0	0	1.0178	1	34470	34470		2.3027	0	1				12927	1495	6511	6540	15586	15586					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2521545290947	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.861	1	82.861	82.361	83.361	0								0	0	0	1.0178	1	34522	34522		2.5775	0	1				12928	1495	6511	6540	15587	15587					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2517578005791	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.318	1	83.318	82.818	83.818	0								0	0	0	1.0178	1	34717	34717		2.3027	0	1				12929	1495	6511	6540	15588	15588					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2522765994072	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.711	1	84.711	84.211	85.211	0								0	0	0	1.0178	1	35300	35300		2.3027	0	1				12930	1495	6511	6540	15589	15589					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2515136599541	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.146	1	88.146	87.646	88.646	0								0	0	0	1.0178	1	36848	36848		2.5775	0	1				12931	1495	6511	6540	15590	15590					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2516662478447	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.274	1	89.274	88.774	89.774	0								0	0	0	1.0178	1	37317	37317		2.3027	0	1				12932	1495	6511	6540	15591	15591					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2515136599541	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.423	1	89.423	88.923	89.923	0								0	0	0	1.0178	1	37379	37379		2.3027	0	1				12933	1495	6511	6540	15592	15592					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2511779665947	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.586	1	89.586	89.086	90.086	0								0	0	0	1.0178	1	37447	37447		2.3027	0	1				12934	1495	6511	6540	15593	15593					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2517272830009	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.069	1	93.069	92.569	93.569	0								0	0	0	1.0178	1	38901	38901		2.3027	0	1				12935	1495	6511	6540	15594	15594					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2515441775322	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.979	1	94.979	94.479	95.479	0								0	0	0	1.0178	1	39694	39694		2.3027	0	1				12936	1495	6511	6540	15595	15595					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2540466189384	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.058	1	78.367	77.867	78.867	0.30933								0	0	0	1.0178	1	32638	32638		2.3027	0	1				12937	1495	6511	6540	15596	15596					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513610720634	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.635	1	50.023	49.523	50.523	1.388								0	0	0	1.0178	1	20359	20359		2.3027	0	1				12938	1495	6511	6540	15597	15597					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2517272830009	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.024	1	86.183	85.683	86.683	1.159								0	0	0	1.0178	1	35678	35678		2.3027	0	1				12939	1495	6511	6540	15598	15598					0.08553543171080946
KGGRVIAP	8	Unmodified	_KGGRVIAP_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2544433474541	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.737	1	87.829	87.329	88.329	1.0918								0	0	0	1.0178	1	36566	36566		0.69038	0	1				12940	1495	6511	6540	15599	15599					0.08553543171080946
KGGSARFL	8	Unmodified	_KGGSARFL_					0	0	0			REV__ENST00000378161.5_1_1:5926431-5928130:-|nuORF	REV__ENST00000378161.5_1_1:5926431-5928130:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	418.2433654665947	2	418.24287	834.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.167	1	71.491	70.991	71.991	0.32359								0	0	0	1.0178	1	29787	29787		4.756	2.4533	1		+		12941	9823	6512	6541	15600	15600					0.047329527914257596
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.7270995974541	2	381.727052	761.439552	-0.066106	-2.5235E-05	-2.2895	-0.00087395	-2.3556	-0.00089919	381.72615818675786	63.817	0.42721	63.817	63.619	64.046	0					32	13	3	0	0	0	0.89178	3	26557	26557;26607;26660		0.69038	0	1	13609000	+		12942	10502	6513	6542	15601;15602;15603	15601					0.049289600374777365
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.7268554568291	2	381.727052	761.439552	2.1489	0.00082028	-3.438	-0.0013124	-1.2891	-0.0004921	381.7257835787371	62.568	0.44769	63.981	63.807	64.254	1.4134					33	14	3	0	0	0	0.89178	3	26215	26215;26264;26315		0.69038	0	1	8444500	+		12943	10502	6513	6542	15604;15605;15606	15604					0.049289600374777365
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	381.727052	761.439552	-0.066106	-2.5235E-05	-2.2895	-0.00087395	-2.3556	-0.00089919	381.72615818675786	63.817	0.42721	63.817	63.619	64.046	0	-0.16412	0.0010894	NaN	0.69038	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13609000	+		12944	10502	6513	6542							0.049289600374777365
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	381.727052	761.439552	1.8282	0.00069786	-4.7247	-0.0018035	-2.8965	-0.0011057	381.7252947980662	63.625	0.51649	63.954	63.725	64.241	0.32899	-0.026548	-0.00076973	NaN	0.69038	40	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17839000	+		12945	10502	6513	6542							0.049289600374777365
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	381.727052	761.439552	2.1489	0.00082028	-3.438	-0.0013124	-1.2891	-0.0004921	381.7257835787371	62.568	0.44769	63.981	63.807	64.254	1.4134	0.00050898	0.0002126	NaN	0.69038	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8444500	+		12946	10502	6513	6542							0.049289600374777365
KGGSGKKT	8	Unmodified	_KGGSGKKT_					0	0	0			REV__ENSG00000155816|ENST00000319653|FMN2	REV__ENSG00000155816|ENST00000319653|FMN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	381.727052	761.439552	2.892	0.0011039	-4.2982	-0.0016407	-1.4062	-0.0005368	381.7253775951573	62.214	0.51086	64.171	63.877	64.388	1.9571	0.19016	-0.00044413	NaN	0.69038	34	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7352300	+		12947	10502	6513	6542							0.049289600374777365
KGGSKTSS	8	Unmodified	_KGGSKTSS_					0	0	0		ENST00000608531.1_1_2:91831346-91843483:-|nuORF;ENST00000539543.1_1:148932830-148951295:+|nuORF;ENST00000457390.1_1:148932830-148933440:+|nuORF;ENST00000544283.5_1_2:91823926-91845846:-|nuORF;nc|ENSG00000130592|P33241-2|LSP1;ENST00000485341.5_1_11:1902588-1908790:+|nuORF;ENSG00000130592|ENST00000311604|LSP1;nc|ENSG00000130592|P33241-3|LSP1	ENST00000608531.1_1_2:91831346-91843483:-|nuORF	ENST00000608531.1_1_2:91831346-91843483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2007324099541	2	376.200867	750.387182	1.5004	0.00056445	-0.33715	-0.00012684	1.1632	0.00043761	376.20048561404445	65.491	0.92613	67.399	66.69	67.616	1.9085					53	29	3	0	0	0	0.89178	3	27397	27397;27444;27498		0.69038	0	1	5097000			12948	2444	6514	6543	15607;15608;15609	15607					0.002003769038537939
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2280151247978	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.081	1	73.406	72.906	73.906	0.32494								0	0	0	1.0178	1	30570	30570		0.69038	0	1				12949	4452	6515	6544	15610	15610					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285949587822	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.286	1	74.611	74.111	75.111	0.32464								0	0	0	1.0178	1	31072	31072		0.69038	0	1				12950	4452	6515	6544	15611	15611					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285949587822	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.415	1	74.739	74.239	75.239	0.32464								0	0	0	1.0178	1	31126	31126		0.69038	0	1				12951	4452	6515	6544	15612	15612					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281982302666	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.948	1	76.269	75.769	76.769	0.32163								0	0	0	1.0178	1	31761	31761		0.69038	0	1				12952	4452	6515	6544	15613	15613					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2279235720634	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.298	1	77.615	77.115	78.115	0.31653								0	0	0	1.0178	1	32325	32325		0.69038	0	1				12953	4452	6515	6544	15614	15614					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2277709841728	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.485	1	77.802	77.302	78.302	0.31653								0	0	0	1.0178	1	32402	32402		0.69038	0	1				12954	4452	6515	6544	15615	15615					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2287170290947	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.689	1	78.999	78.499	79.499	0.30933								0	0	0	1.0178	1	32898	32898		0.69038	0	1				12955	4452	6515	6544	15616	15616					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2282592654228	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.893	1	79.202	78.702	79.702	0.30933								0	0	0	1.0178	1	32986	32986		0.69038	0	1				12956	4452	6515	6544	15617	15617					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2295410037041	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.773	1	88.864	88.364	89.364	1.0918								0	0	0	1.0178	1	37016	37016		0.69038	0	1				12957	4452	6515	6544	15618	15618					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2290527224541	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.302	1	94.174	93.674	94.674	0.87176								0	0	0	1.0178	1	39268	39268		0.69038	0	1				12958	4452	6515	6544	15619	15619					0.05100379757323026
KGGSRAAL	8	Unmodified	_KGGSRAAL_					0	0	0		ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	ENSG00000177551|ENST00000320238|NHLH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2288390994072	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.094	1	73.918	73.418	74.418	1.824								0	0	0	1.0178	1	30247	30247		0.69038	0	1				12959	4452	6515	6544	15620	15620					0.05100379757323026
KGGSVATI	8	Unmodified	_KGGSVATI_					0	0	0			REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	366.7186157107353	2	366.716153	731.417754	1.8285	0.00067053	1.6748	0.00061419	3.5033	0.0012847	366.7173824576475	61.474	0.30778	61.804	61.641	61.949	0.32974					19	9	3	0	0	0	0.89178	1	25768	25768		0.69038	0	1	1268800	+		12960	9712	6516	6545	15621	15621					0.041301552889080995
KGGSVATI	8	Unmodified	_KGGSVATI_					0	0	0			REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	366.716153	731.417754	-0.28565	-0.00010475	2.428	0.00089038	2.1423	0.00078563	366.7176699347202	61.645	0.37931	61.645	61.487	61.867	0	-0.07973	0.00028084	NaN	0.69038	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1294100	+		12961	9712	6516	6545							0.041301552889080995
KGGSVATI	8	Unmodified	_KGGSVATI_					0	0	0			REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	366.716153	731.417754	1.8285	0.00067053	1.6748	0.00061419	3.5033	0.0012847	366.7173824576475	61.474	0.30778	61.804	61.641	61.949	0.32974	0.07973	-0.00027155	NaN	0.69038	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1268800	+		12962	9712	6516	6545							0.041301552889080995
KGGTGAGR	8	Unmodified	_KGGTGAGR_					0	0	0			REV__ENST00000449740.6_1_8:82593790-82598187:-|nuORF	REV__ENST00000449740.6_1_8:82593790-82598187:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	352.1958495974541	2	352.195919	702.377286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.623	1	79.924	79.424	80.424	0.30047								0	0	0	1.0178	1	33289	33289		0.69038	0	1		+		12963	13122	6517	6546	15622	15622					0.01419233689136945
KGGVASGR	8	Unmodified	_KGGVASGR_					0	0	0			REV__ENST00000471720.1_1_3:160170509-160171103:+|nuORF	REV__ENST00000471720.1_1_3:160170509-160171103:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2125732302666	2	366.211569	730.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.282	1	48.613	48.113	49.113	0.33034								0	0	0	1.0178	1	20246	20246		0.69038	0	1		+		12964	13287	6518	6547	15623	15623					0.0325980672323567
KGGVGHRA	8	Unmodified	_KGGVGHRA_					0	0	0			REV__ENST00000565298.5_1_16:1576517-1634259:-|nuORF	REV__ENST00000565298.5_1_16:1576517-1634259:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	2	391.225011	780.435469	1.5246	0.00059647	1.7806	0.0006966	3.3052	0.0012931	391.2258436480392	66.245	1.6272	68.134	67.137	68.764	1.8889					93	52	3	0	0	0	2.3239	1	27406	27406		0.6015	0.6015	1	3339400	+		12965	13932	6519	6548	15624	15624					0.0364691533441146
KGGVGKLV	8	Unmodified	_KGGVGKLV_					0	0	0		nc|ENSG00000064607|Q8IX01-4|SUGP2;nc|ENSG00000064607|Q8IX01-3|SUGP2;ENSG00000064607|ENST00000452918|SUGP2;SUGP2|p.D303Vfs*22|1|0.07|ENSG00000064607|chr19:19025440-19025441|-/TCACAGATGCAATCATAGGTCA|frameshift_variant	nc|ENSG00000064607|Q8IX01-4|SUGP2	nc|ENSG00000064607|Q8IX01-4|SUGP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.2491943240166	2	379.250163	756.485774	-0.1378	-5.2262E-05	-3.1999	-0.0012136	-3.3377	-0.0012658	379.2489806960347	63.848	1.1318	63.848	63.492	64.624	0					99	35	5	0	0	0	0.89178	1	26673	26673		0.69038	0	1	140770000			12966	775	6520	6549	15625	15625					0.09779024939552983
KGGVGRVR	8	Unmodified	_KGGVGRVR_					0	0	0		ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.7622253298759	2	414.761761	827.508969	0.47989	0.00019904	-1.2077	-0.0005009	-0.7278	-0.00030186	414.76137118485224	70.492	1.2973	70.492	70.149	71.446	0					117	41	5	0	0	0	0.89178	1	29450	29450		0.69038	0	1	444140000			12967	7413	6521	6550	15626	15626					0.08831463776891724
KGGVGRVR	8	Unmodified	_KGGVGRVR_					0	0	0		ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.7622863650322	2	414.761761	827.508969	1.4773	0.00061275	-1.5462	-0.00064132	-0.068895	-2.8575E-05	414.76118648371573	70.254	1.8125	70.576	70.192	72.005	0.32224					142	57	5	0	0	0	0.89178	1	29330	29330		0.69038	0	1	366180000			12968	7413	6521	6550	15627	15627					0.08831463776891724
KGGVGRVR	8	Unmodified	_KGGVGRVR_					0	0	0		ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	ENST00000575842.5_1_17:79479547-79479733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.7625305056572	2	414.761761	827.508969	1.2204	0.00050617	-0.097035	-4.0246E-05	1.1234	0.00046593	414.7616314454123	68.988	1.3668	70.841	70.497	71.864	1.853					122	43	5	0	0	0	0.89178	1	29028	29028		0.69038	0	1	158330000			12969	7413	6521	6550	15628	15628					0.08831463776891724
KGGVPGIL	8	Unmodified	_KGGVPGIL_					0	0	0			REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1006042361259	2	370.736889	739.459225	0.29171	0.00010815	2.8343	0.0010508	3.126	0.0011589	370.7380274440191	25.991	0.37159	27.25	26.987	27.358	1.2594					21	11	2	0	0	0	2.3239	1	10847	10847		0	0	1	936730	+		12970	14929	6522	6551	15629	15629					0.07907336048231173
KGGVPGIL	8	Unmodified	_KGGVPGIL_					0	0	0			REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	370.736889	739.459225	-1.2084	-0.00044802	6.1328	0.0022737	4.9244	0.0018257	370.7391996632073	27.486	0.33378	27.486	27.38	27.714	0	0.17082	0.0013872	NaN	0	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	750850	+		12971	14929	6522	6551							0.07907336048231173
KGGVPGIL	8	Unmodified	_KGGVPGIL_					0	0	0			REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	REV__tr|A0A553SK16|A0A553SK16_NIACIArgininosuccinatelyaseOS=NialliacirculansOX=1397GN=argHPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	370.736889	739.459225	0.79543	0.0002949	3.9078	0.0014488	4.7032	0.0017437	370.7383259512178	26.948	0.40553	27.21	27.079	27.484	0.26173	-0.10567	-0.00026257	NaN	0	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	843180	+		12972	14929	6522	6551							0.07907336048231173
KGGVRFIH	8	Unmodified	_KGGVRFIH_					0	0	0			REV__ENST00000416734.1_1_7:121080890-121081274:-|nuORF	REV__ENST00000416734.1_1_7:121080890-121081274:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5366393923759	3	305.183733	912.52937	0.56029	0.00017099	0.88641	0.00027052	1.4467	0.00044151	305.18369050221645	32.385	0.27722	32.679	32.528	32.805	0.29431					12	8	2	0	0	0	2.3239	1	13622	13622		1.6526	0	1	618550	+		12973	12949	6523	6552	15630	15630					0.06960634436711644
KGGVRSST	8	Unmodified	_KGGVRSST_					0	0	0			REV__ENST00000529712.5_1_11:47690447-47736202:-|nuORF	REV__ENST00000529712.5_1_11:47690447-47736202:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2238952517509	2	396.222134	790.429715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.691	1	88.917	88.417	89.417	0.22607								0	0	0	1.0178	1	37185	37185		2.3027	0	1		+		12974	10804	6524	6553	15631	15631					0.02611772032105364
KGHGGACG	8	Unmodified	_KGHGGACG_					0	0	0			REV__ENST00000497690.1_1_2:71295524-71295803:+|nuORF	REV__ENST00000497690.1_1_2:71295524-71295803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	686.3054687380791	1	686.303869	685.296593	1.8788	0.0012894	3.2642	0.0022402	5.143	0.0035297	686.3061089198555	44.056	0.40191	45.41	45.163	45.565	1.3536					24	12	3	0	0	0	0.89178	1	18421	18421		0.69038	0	1	2195400	+		12975	13480	6525	6554	15632	15632					-0.0586437062540881
KGHGGACG	8	Unmodified	_KGHGGACG_					0	0	0			REV__ENST00000497690.1_1_2:71295524-71295803:+|nuORF	REV__ENST00000497690.1_1_2:71295524-71295803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	686.3056518435478	1	686.303869	685.296593	1.5515	0.0010648	3.1902	0.0021894	4.7417	0.0032542	686.3060293754717	43.608	0.33272	45.552	45.368	45.701	1.9438					21	10	3	0	0	0	0.89178	2	18246	18246;18295		0.69038	0	1	2350900	+		12976	13480	6525	6554	15633;15634	15633					-0.0586437062540881
KGIFSSAK	8	Unmodified	_KGIFSSAK_					0	0	0		ENST00000374135.8_1_1:27205960-27206107:-|nuORF	ENST00000374135.8_1_1:27205960-27206107:-|nuORF	ENST00000374135.8_1_1:27205960-27206107:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	837.4858886599541	1	837.482879	836.475603	2.2211	0.0018602	2.7563	0.0023084	4.9774	0.0041685	837.4850751647849	83.061	0.21546	83.061	82.922	83.138	0					9	6	2	0	0	0	0.82039	1	34604	34604		19.439	2.3524	1	526790			12977	6170	6526	6555	15635	15635					0.05082417214327961
KGIKEQTA	8	Unmodified	_KGIKEQTA_					0	0	0		tr|A0A7D7A1U2|A0A7D7A1U2_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13900PE=4SV=1	tr|A0A7D7A1U2|A0A7D7A1U2_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13900PE=4SV=1	tr|A0A7D7A1U2|A0A7D7A1U2_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	874.4990112185478	1	874.499258	873.491981	3.0668	0.0026819	-2.6023	-0.0022757	0.4645	0.00040621	874.4971023616279	103.43	0.063736	103.59	103.54	103.6	0.16445					8	2	4	0	0	0	0.88663	1	43592	43592		4.756	0.42677	1	119900000			12978	17244	6527	6556	15636	15636					0.05017498380414054
KGIRTSTTT	9	Unmodified	_KGIRTSTTT_					0	0	0			REV__ENST00000474371.1_1_1:32689659-32696621:+|nuORF	REV__ENST00000474371.1_1_1:32689659-32696621:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	322.1859619021416	3	322.185579	963.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.32	1	103.49	102.99	103.99	0.16445								0	0	0	0.42693	1	43539	43539		1.0715	0	1		+		12979	8841	6528	6557	15637	15637					0.05168268437842016
KGKAALAG	8	Unmodified	_KGKAALAG_					0	0	0		ENST00000413551.1_1_7:47479242-47492667:-|nuORF	ENST00000413551.1_1_7:47479242-47492667:-|nuORF	ENST00000413551.1_1_7:47479242-47492667:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2264587283134	2	358.226688	714.438824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.36	1	110.52	110.02	111.02	0.15228								0	0	0	1.0178	1	47860	47860		0	0	1				12980	6394	6529	6558	15638	15638					0.07018165388399211
KGKCKKRG	8	Unmodified	_KGKCKKRG_					0	0	0		nc|ENSG00000196642|Q3YEC7-4|RABL6;nc|ENSG00000196642|Q3YEC7-5|RABL6;nc|ENSG00000196642|Q3YEC7-6|RABL6;nc|ENSG00000196642|Q3YEC7-3|RABL6;ENSG00000196642|ENST00000311502|RABL6;nc|ENSG00000196642|Q3YEC7-2|RABL6	nc|ENSG00000196642|Q3YEC7-4|RABL6	nc|ENSG00000196642|Q3YEC7-4|RABL6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	453.1772643923759	2	452.779096	903.54364	3.3614	0.001522	-0.0035432	-1.6043E-06	3.3579	0.0015204	452.77873953595156	101.5	0.12462	101.67	101.58	101.7	0.17031					5	3	2	0	0	0	2.3239	1	42679	42679		0	0	1	205170			12981	4953	6530	6559	15639	15639					0.08800963593341748
KGKGGGPG	8	Unmodified	_KGKGGGPG_					0	0	0			REV__ENST00000260818.10_1_3:132136474-132136507:+|nuORF	REV__ENST00000260818.10_1_3:132136474-132136507:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3671142458916	1	657.36785	656.360573	1.3338	0.00087682	-1.5484	-0.0010178	-0.21453	-0.00014103	657.3665135555766	54.99	0.39981	56.395	56.211	56.611	1.4048					20	13	2	0	0	0	0.89176	1	23028	23028		0.79363	0	1	2327300	+		12982	12180	6531	6560	15640	15640					0.01864732803176139
KGKGGGPG	8	Unmodified	_KGKGGGPG_					0	0	0			REV__ENST00000260818.10_1_3:132136474-132136507:+|nuORF	REV__ENST00000260818.10_1_3:132136474-132136507:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.3680908083916	1	657.36785	656.360573	1.611	0.001059	-1.7279	-0.0011358	-0.11683	-7.6803E-05	657.3664694158264	54.603	0.34369	56.572	56.379	56.722	1.9684					18	11	2	0	0	0	0.89198	1	22871	22871		0	0	1	2621000	+		12983	12180	6531	6560	15641	15641					0.01864732803176139
KGKGKKKG	8	Unmodified	_KGKGKKKG_					0	0	0		ENST00000560801.5_2_15:31320559-31354823:-|nuORF;nc|ENSG00000134160|Q7Z4N2-2|TRPM1;nc|ENSG00000134160|Q7Z4N2-3|TRPM1;nc|ENSG00000134160|Q7Z4N2|TRPM1;ENSG00000134160|ENST00000256552|TRPM1;nc|ENSG00000134160|Q7Z4N2-5|TRPM1	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	830.5586425662041	1	830.557047	829.549771	3.077	0.0025556	-1.2235	-0.0010162	1.8536	0.0015395	830.5561053490565	99.681	0.093857	99.879	99.801	99.894	0.19767					7	3	3	0	0	0	0.89198	1	41964	41964		0	0	1	10438000			12984	2597	6532	6561	15642	15642					0.12817805096506163
KGKIHHEA	8	Unmodified	_KGKIHHEA_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1748535037041	3	307.175126	918.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.501	1	19.949	19.449	20.449	1.448								0	0	0	1.0178	1	7695	7695		0.40072	0	1		+		12985	10472	6533	6562	15643	15643					0.04103740194398142
KGKIKLPTFRK	11	Unmodified	_KGKIKLPTFRK_					0	0	0		tr|A0A7D6VV95|A0A7D6VV95_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23550PE=3SV=1	tr|A0A7D6VV95|A0A7D6VV95_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23550PE=3SV=1	tr|A0A7D6VV95|A0A7D6VV95_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23550PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2919494509697	3	439.290602	1314.84998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.683	1	94.96	94.46	95.46	1.277								0	0	0	0.63775	1	39419	39419		0	0	1				12986	16964	6534	6563	15644	15644					0.20514472307218057
KGKKKTVL	8	Unmodified	_KGKKKTVL_					0	0	0			REV__tr|A0A7D6ZHD0|A0A7D6ZHD0_9CLOTGalactitol-1-phosphate5-dehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02430PE=3SV=1	REV__tr|A0A7D6ZHD0|A0A7D6ZHD0_9CLOTGalactitol-1-phosphate5-dehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.3125488162041	2	451.313295	900.612037	3.3623	0.0015174	-1.4172	-0.00063959	1.9451	0.00087785	451.31234938224236	107.75	0.20123	107.91	107.79	107.99	0.15781					26	10	4	0	0	0	0.89176	1	46463	46463		0.79363	0	1	556280000	+		12987	15647	6535	6564	15645	15645					0.15775531444842272
KGKMAGRPV	9	Unmodified	_KGKMAGRPV_					0	0	0			REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2788268923759	2	472.278929	942.543305	1.9203	0.00090693	-2.6453	-0.0012493	-0.72499	-0.0003424	472.27781402949455	97.892	0.18037	97.892	97.784	97.965	0					10	5	3	0	0	0	0.70108	1	40924	40924		7.2892	1.5288	1	7155300	+		12988	13915	6536	6565	15646	15646					0.06973543873482413
KGKMAGRPV	9	Unmodified	_KGKMAGRPV_					0	0	0			REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2786743044853	2	472.278929	942.543305	3.4781	0.0016427	-3.8512	-0.0018188	-0.37306	-0.00017619	472.27718869006867	97.761	0.12715	97.852	97.778	97.906	0.090881					10	4	3	0	0	0	0.70108	1	40898	40898		7.2892	0.93513	1	8329600	+		12989	13915	6536	6565	15647	15647					0.06973543873482413
KGKMAGRPV	9	Unmodified	_KGKMAGRPV_					0	0	0			REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	472.278929	942.543305	1.9203	0.00090693	-2.6453	-0.0012493	-0.72499	-0.0003424	472.27781402949455	97.892	0.18037	97.892	97.784	97.965	0	0.058685	0.0011695	NaN	7.2892	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7155300	+		12990	13915	6536	6565							0.06973543873482413
KGKMAGRPV	9	Unmodified	_KGKMAGRPV_					0	0	0			REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	472.278929	942.543305	3.4781	0.0016427	-3.8512	-0.0018188	-0.37306	-0.00017619	472.27718869006867	97.761	0.12715	97.852	97.778	97.906	0.090881	0.019059	3.0424E-05	NaN	7.2892	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8329600	+		12991	13915	6536	6565							0.06973543873482413
KGKMAGRPV	9	Unmodified	_KGKMAGRPV_					0	0	0			REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	REV__ENST00000565677.5_1_16:730312-731203:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	472.278929	942.543305	3.5792	0.0016904	-5.3159	-0.0025106	-1.7367	-0.0008202	472.276500426938	97.465	0.20957	97.771	97.625	97.835	0.3062	-0.061861	-0.0013531	NaN	7.2892	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5008700	+		12992	13915	6536	6565							0.06973543873482413
KGKMKKLG	8	Unmodified	_KGKMKKLG_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;ENST00000476625.5_1_X:48660534-48664079:+|nuORF;ENST00000489352.5_1_X:48660634-48664079:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.2889282107353	2	445.286223	888.557893	1.5263	0.00067964	2.2234	0.00099003	3.7497	0.0016697	445.28717203505676	73.507	0.76669	73.507	73.153	73.919	0					85	24	5	0	0	0	0.89178	2	30531	30531;30634		0.69038	0	1	146920000			12993	1175	6537	6566	15648;15649	15648					0.10915616021634378
KGKMKKLG	8	Unmodified	_KGKMKKLG_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;ENST00000476625.5_1_X:48660534-48664079:+|nuORF;ENST00000489352.5_1_X:48660634-48664079:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.2888671755791	2	445.286223	888.557893	2.7177	0.0012101	1.3996	0.00062323	4.1173	0.0018334	445.2868824249724	73.242	0.92504	73.567	73.276	74.201	0.32494					93	29	5	0	0	0	0.89178	3	30591	30591;30691;30730		0.69038	0	1	316040000			12994	1175	6537	6566	15650;15651;15652	15650					0.10915616021634378
KGKMKKLG	8	Unmodified	_KGKMKKLG_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;ENST00000476625.5_1_X:48660534-48664079:+|nuORF;ENST00000489352.5_1_X:48660634-48664079:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.2890502810478	2	445.286223	888.557893	2.7916	0.001243	3.0829	0.0013728	5.8745	0.0026158	445.287568600455	71.978	0.95453	73.801	73.507	74.462	1.824					83	30	5	0	0	0	0.89178	2	30147	30147;30250		0.69038	0	1	104330000			12995	1175	6537	6566	15653;15654	15653					0.10915616021634378
KGKMKKLG	8	Unmodified	_KGKMKKLG_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;ENST00000476625.5_1_X:48660534-48664079:+|nuORF;ENST00000489352.5_1_X:48660634-48664079:+|nuORF;ENST00000481929.5_1_X:48660630-48664079:+|nuORF;ENST00000477528.5_1_X:48660534-48664079:+|nuORF;ENST00000465269.5_1_X:48660931-48664079:+|nuORF;ENST00000462730.5_1_X:48660634-48664079:+|nuORF	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	445.286223	888.557893	2.841	0.001265	3.2529	0.0014485	6.0938	0.0027135	445.28764771919367	72.328	0.64355	73.657	73.361	74.004	1.3297	0.023997	0.00079513	NaN	0.69038	72	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89247000			12996	1175	6537	6566							0.10915616021634378
KGKPLAIA	8	Unmodified	_KGKPLAIA_					0	0	0		tr|A0A553SKZ4|A0A553SKZ4_NIACIDNApolymeraseIVOS=NialliacirculansOX=1397GN=dinBPE=3SV=1	tr|A0A553SKZ4|A0A553SKZ4_NIACIDNApolymeraseIVOS=NialliacirculansOX=1397GN=dinBPE=3SV=1	tr|A0A553SKZ4|A0A553SKZ4_NIACIDNApolymeraseIVOS=NialliacirculansOX=1397GN=dinBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2671081423759	2	399.265813	796.517074	3.0953	0.0012359	-0.085853	-3.4278E-05	3.0095	0.0012016	399.26610904711777	107.81	0.21506	107.97	107.86	108.08	0.15795					35	11	4	0	0	0	0.89198	1	46458	46458		0	0	1	1347700000			12997	16315	6538	6567	15655	15655					0.11067597973635657
KGKSLAAV	8	Unmodified	_KGKSLAAV_					0	0	0			REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	387.2460510134697	2	387.247621	772.480688	0.19621	7.598E-05	-2.2863	-0.00088535	-2.0901	-0.00080937	387.24661098429084	60.154	0.90926	60.154	59.856	60.765	0					54	29	2	0	0	0	0.89051	1	25083	25083		2.3027	0	1	2593000	+		12998	8780	6539	6568	15656	15656					0.08534721076932783
KGKSLAAV	8	Unmodified	_KGKSLAAV_					0	0	0			REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	387.247621	772.480688	0.19621	7.598E-05	-2.2863	-0.00088535	-2.0901	-0.00080937	387.24661098429084	60.154	0.90926	60.154	59.856	60.765	0	-0.078933	1.6593E-05	NaN	2.3027	54	29	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2593000	+		12999	8780	6539	6568							0.08534721076932783
KGKSLAAV	8	Unmodified	_KGKSLAAV_					0	0	0			REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	REV__ENST00000398187.6_1_11:95504727-95512267:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	387.247621	772.480688	2.2602	0.00087527	-2.3269	-0.00090109	-0.066685	-2.5824E-05	387.2462190020615	59.984	1.0451	60.312	59.81	60.856	0.32809	0.078933	-1.4887E-05	NaN	2.3027	71	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2684000	+		13000	8780	6539	6568							0.08534721076932783
KGKVGPPGGR	10	Unmodified	_KGKVGPPGGR_					0	0	0		ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	ENSG00000081052|ENST00000396625|COL4A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1962768435478	3	318.194409	951.561398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.977	1	56.298	55.798	56.798	0.32088								0	0	0	0.66254	1	23444	23444		0.15932	0.15932	1				13001	1014	6540	6569	15657	15657					0.08368002119846096
KGLAKAMRIPL	11	Unmodified	_KGLAKAMRIPL_					0	0	0			REV__ENSG00000131183|ENST00000324417|SLC34A1	REV__ENSG00000131183|ENST00000324417|SLC34A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3828002810478	2	599.378643	1196.74273	4.6782	0.002804	1.3661	0.00081883	6.0443	0.0036229	599.3794515251226	89.378	0.59403	90.782	90.456	91.05	1.4045					60	18	4	0	0	0	1.0131	1	37660	37660		2.9952	0.93549	1	13994000	+		13002	9815	6541	6570	15658	15658					0.15223179101371898
KGLCPKGA	8	Unmodified	_KGLCPKGA_					0	0	0		ENST00000431541.5_1_1:27114769-27117340:+|nuORF;ENST00000374145.5_1_1:27114769-27115003:+|nuORF	ENST00000431541.5_1_1:27114769-27117340:+|nuORF	ENST00000431541.5_1_1:27114769-27117340:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	387.2844116091728	2	387.220549	772.426544	2.7272	0.001056	0.91682	0.00035501	3.6441	0.0014111	387.2209777534169	107.94	0.11369	107.99	107.93	108.04	0.050644					10	5	3	0	0	0	2.3239	1	46296	46296		0.69038	0	1	21349000			13003	6171	6542	6571	15659	15659					0.03122805653731575
KGLKPGVV	8	Unmodified	_KGLKPGVV_					0	0	0		ENSG00000115414|ENST00000354785|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-9|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-12|FN1;FN1-SEC31A|1|fusion;FN1-SEC31A|2|fusion;FN1|p.E1684*|1|0.04|ENSG00000115414|chr2:215380922-215380923|-/A|frameshift_variant	ENSG00000115414|ENST00000354785|FN1	ENSG00000115414|ENST00000354785|FN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	398.7745849490166	2	399.265813	796.517074	2.6921	0.0010749	0.44402	0.00017728	3.1361	0.0012521	399.26626278636695	107.82	0.2084	107.98	107.9	108.11	0.15781					40	13	4	0	0	0	2.3239	1	46469	46469		0.79363	0	1	1425500000			13004	1916	6543	6572	15660	15660					0.11067597973669763
KGLLKALK	8	Unmodified	_KGLLKALK_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.8104431033134	2	435.810388	869.606223	0.71104	0.00030988	-0.95516	-0.00041627	-0.24412	-0.00010639	435.80999567476596	109.14	0.9659	109.14	108.7	109.67	0					112	44	3	0	0	0	0.89178	3	47121	47121;47180;47238		0.69038	0	1	36772000			13005	5227	6544	6573	15661;15662;15663	15661					0.16620432933154916
KGLLKALK	8	Unmodified	_KGLLKALK_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.8105651736259	2	435.810388	869.606223	3.1668	0.0013801	-2.4305	-0.0010592	0.73624	0.00032086	435.8092755909011	109.16	0.87575	109.21	108.75	109.62	0.048843					91	38	3	0	0	0	0.89178	2	46990	46990;47056		0.69038	0	1	30048000			13006	5227	6544	6573	15664;15665	15664					0.16620432933154916
KGLLKALK	8	Unmodified	_KGLLKALK_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.8109008669853	2	435.810388	869.606223	3.3339	0.001453	-2.6441	-0.0011523	0.68988	0.00030066	435.80933042662883	109.13	0.78305	109.28	108.97	109.75	0.15898					82	36	3	0	0	0	0.89178	1	47339	47339		0.69038	0	1	31842000			13007	5227	6544	6573	15666	15666					0.16620432933154916
KGLLKALK	8	Unmodified	_KGLLKALK_					0	0	0		ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	435.810388	869.606223	3.3205	0.0014471	-2.963	-0.0012913	0.35747	0.00015579	435.80918484639506	109.1	0.87426	109.25	108.77	109.65	0.1548	0.029566	-0.00054866	NaN	0.69038	93	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20278000			13008	5227	6544	6573							0.16620432933154916
KGLRKKLNKV	10	Unmodified	_KGLRKKLNKV_					0	0	0			REV__tr|A0A7D6VRZ9|A0A7D6VRZ9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20970PE=4SV=1	REV__tr|A0A7D6VRZ9|A0A7D6VRZ9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20970PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	592.4073364138603	2	592.403507	1182.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.41	1	106.47	105.97	106.97	0.05455								0	0	0	0.6624	1	45330	45330		0.40072	0.1317	1		+		13009	15432	6545	6574	15667	15667					0.20837630101686955
KGLVQVIFH	9	Unmodified	_KGLVQVIFH_					0	0	0			REV__ADAMTS18|p.M864Efs*9|1|0.07|ENSG00000140873|chr16:77300347-77300348|-/ATGCTTCTATTTGTAAATAATTC|frameshift_variant	REV__ADAMTS18|p.M864Efs*9|1|0.07|ENSG00000140873|chr16:77300347-77300348|-/ATGCTTCTATTTGTAAATAATTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.5474120974541	3	347.54656	1039.61785	1.3884	0.00048254	0.76655	0.00026641	2.155	0.00074895	347.5468510524247	42.422	0.80695	42.743	42.574	43.381	0.32058					52	26	2	0	0	0	0.77025	1	17851	17851		4.5289	0.58447	1	4306100	+		13010	8081	6546	6575	15668	15668					0.09962629956521596
KGNSGVTF	8	Unmodified	_KGNSGVTF_					0	0	0			REV__nc|ENSG00000124789|P49790-2|NUP153	REV__nc|ENSG00000124789|P49790-2|NUP153	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.2097656130791	2	405.211235	808.407917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.903	1	91.308	90.808	91.808	1.4045								0	0	0	1.0178	1	37873	37873		2.3027	0	1		+		13011	9657	6547	6576	15669	15669					-0.003950327164943701
KGPARQAK	8	Unmodified	_KGPARQAK_					0	0	0		nc|ENSG00000124839|Q9H0T7-2|RAB17;ENST00000466244.1_1_2:238483664-238484282:-|nuORF;ENSG00000124839|ENST00000264601|RAB17	nc|ENSG00000124839|Q9H0T7-2|RAB17	nc|ENSG00000124839|Q9H0T7-2|RAB17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.2630798220634	2	428.261594	854.508634	2.6661	0.0011418	0.84244	0.00036078	3.5086	0.0015026	428.26184252814	72.358	0.67717	73.688	73.391	74.069	1.3297					77	21	5	0	0	0	0.89178	1	30344	30344		0.69038	0.16561	1	103450000			13012	2246	6548	6577	15670	15670					0.0755604405703707
KGPARQAK	8	Unmodified	_KGPARQAK_					0	0	0		nc|ENSG00000124839|Q9H0T7-2|RAB17;ENST00000466244.1_1_2:238483664-238484282:-|nuORF;ENSG00000124839|ENST00000264601|RAB17	nc|ENSG00000124839|Q9H0T7-2|RAB17	nc|ENSG00000124839|Q9H0T7-2|RAB17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	428.2628967165947	2	428.261594	854.508634	2.6907	0.0011523	1.0039	0.00042995	3.6946	0.0015823	428.2619177183056	72.037	0.89125	73.861	73.507	74.399	1.824					78	28	5	0	0	0	0.89178	2	30171	30171;30223		0.69038	0.16561	1	144060000			13013	2246	6548	6577	15671;15672	15671					0.0755604405703707
KGPFVPLH	8	Unmodified	_KGPFVPLH_					0	0	0		ENST00000404299.3_1_12:22478166-22478244:-|nuORF	ENST00000404299.3_1_12:22478166-22478244:-|nuORF	ENST00000404299.3_1_12:22478166-22478244:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	449.2675048708916	2	447.763438	893.512323	2.735	0.0012246	1.7805	0.00079726	4.5155	0.0020219	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89178	2	30465	30465;30518		0.69038	0	1	26597000			13014	6357	6549	6578	15673;15674	15673					0.06130713830896184
KGPGRPGR	8	Unmodified	_KGPGRPGR_					0	0	0		ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7470580935478	2	412.746111	823.477669	0.58265	0.00024049	1.0135	0.00041833	1.5962	0.00065882	412.7465388548211	65.913	0.479	65.913	65.644	66.123	0					43	14	4	0	0	0	0.89051	2	27402	27402;27478		2.3027	0	1	23193000			13015	7572	6550	6579	15675;15676	15675					0.05886890742806372
KGPGRPGR	8	Unmodified	_KGPGRPGR_					0	0	0		ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	412.746111	823.477669	2.8999	0.0011969	-0.46406	-0.00019154	2.4358	0.0010054	412.74596023226263	64.702	0.5861	66.109	65.77	66.356	1.4071	0.039662	-0.00050603	NaN	2.3027	47	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13595000			13016	7572	6550	6579							0.05886890742806372
KGPGRPGR	8	Unmodified	_KGPGRPGR_					0	0	0		ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	ENST00000608937.5_1_9:137000676-137000952:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	412.746111	823.477669	2.3266	0.00096028	-0.02711	-1.1189E-05	2.2994	0.00094909	412.7461372822758	64.32	0.56786	66.248	65.919	66.487	1.928	0.17862	-0.00014533	NaN	2.3027	48	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15040000			13017	7572	6550	6579							0.05886890742806372
KGPKGPAG	8	Unmodified	_KGPKGPAG_					0	0	0			REV__ENSG00000092758|ENST00000649368|COL9A3	REV__ENSG00000092758|ENST00000649368|COL9A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.2106811404228	2	356.211038	710.407523	-1.5566	-0.00055447	1.5825	0.00056369	0.025872	9.2159E-06	356.21151886696526	107.87	0.19696	107.87	107.75	107.95	0					24	10	4	0	0	0	0.89178	1	46318	46318		0.69038	0	1	292960000	+		13018	8917	6551	6580	15677	15677					0.040735923543252284
KGPKKVEKY	9	Unmodified	_KGPKKVEKY_					0	0	0		ENST00000487211.5_1_20:55043753-55046687:+|nuORF	ENST00000487211.5_1_20:55043753-55046687:+|nuORF	ENST00000487211.5_1_20:55043753-55046687:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8259155154228	2	538.826766	1075.63898	1.6933	0.0009124	-2.455	-0.0013228	-0.76164	-0.00041039	538.8254832307166	94.214	0.40193	94.214	93.994	94.396	0					31	12	3	0	0	0	0.84195	1	39371	39371		1.6526	1.0511	1	2168800			13019	6876	6552	6581	15678	15678					0.1041859526535518
KGPKKVEKY	9	Unmodified	_KGPKKVEKY_					0	0	0		ENST00000487211.5_1_20:55043753-55046687:+|nuORF	ENST00000487211.5_1_20:55043753-55046687:+|nuORF	ENST00000487211.5_1_20:55043753-55046687:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8270141482353	2	538.826766	1075.63898	2.7236	0.0014676	-2.7017	-0.0014558	0.021898	1.1799E-05	538.8253751971384	94.007	0.47564	94.152	93.942	94.417	0.14493					33	14	3	0	0	0	0.84195	1	39315	39315		1.6526	0.96225	1	1794400			13020	6876	6552	6581	15679	15679					0.1041859526535518
KGPKRLMP	8	Unmodified	_KGPKRLMP_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-5|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	309.5246765017509	3	309.52499	925.553142	-3.0804	-0.00095347	1.385	0.00042868	-1.6955	-0.0005248	309.52530902490275	22.391	0.51844	22.391	22.06	22.578	0					45	16	4	0	0	0	0.89185	1	9275	9275		0.45834	0	1	8261200	+		13021	10553	6553	6582	15680	15680					0.08738731878861472
KGPKRLMPRFP	11	Unmodified	_KGPKRLMPRFP_					0	0	0			REV__nc|ENSG00000158321|Q8WXX7-5|AUTS2	REV__nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8987914919853	2	663.894992	1325.77543	1.777	0.0011798	2.3375	0.0015519	4.1146	0.0027316	663.8962920297204	79.976	0.62921	80.276	80.004	80.633	0.30046					48	19	3	0	0	0	1.0366	1	33419	33419		1.1933	0.12188	1	914400	+		13022	10553	6554	6583	15681	15681					0.12557386224239053
KGPKRRTPNP	10	Unmodified	_KGPKRRTPNP_					0	0	0			REV__ENSG00000124107|ENST00000338380|SLPI	REV__ENSG00000124107|ENST00000338380|SLPI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8431274294853	2	575.843813	1149.67307	1.705	0.00098179	-0.86595	-0.00049865	0.83901	0.00048314	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.89803	1	32099	32099		1.4819	0	1	3135100	+		13023	9631	6555	6584	15682	15682					0.10422436476983421
KGPNFLFV	8	Unmodified	_KGPNFLFV_					0	0	0		ENST00000417775.5_1_1:75198785-75198893:-|nuORF	ENST00000417775.5_1_1:75198785-75198893:-|nuORF	ENST00000417775.5_1_1:75198785-75198893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	461.2650329470634	2	461.263271	920.511988	2.0467	0.00094406	3.758	0.0017334	5.8046	0.0026775	461.2639614826444	76.313	0.64458	76.313	76.011	76.656	0					48	20	3	0	0	0	0.88663	1	31728	31728		4.756	0	1	12482000			13024	6417	6556	6585	15683	15683					0.048552941110415304
KGPNFLFV	8	Unmodified	_KGPNFLFV_					0	0	0		ENST00000417775.5_1_1:75198785-75198893:-|nuORF	ENST00000417775.5_1_1:75198785-75198893:-|nuORF	ENST00000417775.5_1_1:75198785-75198893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	461.2646667361259	2	461.263271	920.511988	2.9408	0.0013565	2.9052	0.0013401	5.846	0.0026966	461.26383609540466	76.177	0.64537	76.499	76.112	76.758	0.32163					47	20	3	0	0	0	0.88663	1	31812	31812		4.756	0	1	20461000			13025	6417	6556	6585	15684	15684					0.048552941110415304
KGPPRRARGRG	11	Unmodified	_KGPPRRARGRG_					0	0	0			REV__ENSG00000100038|ENST00000357179|TOP3B	REV__ENSG00000100038|ENST00000357179|TOP3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.3676025271416	2	604.365779	1206.717	2.3638	0.0014286	0.50098	0.00030277	2.8648	0.0017314	604.3658788842193	92.517	0.51559	92.517	92.228	92.744	0					53	16	4	0	0	0	1.0395	1	38616	38616		0.30703	0	1	23157000	+		13026	8964	6557	6586	15685	15685					0.12191465693967984
KGPPRRARGRG	11	Unmodified	_KGPPRRARGRG_					0	0	0			REV__ENSG00000100038|ENST00000357179|TOP3B	REV__ENSG00000100038|ENST00000357179|TOP3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	403.2472106814384	3	403.246278	1206.717	2.7831	0.0011223	-0.2911	-0.00011738	2.492	0.0010049	403.24620195643837	92.355	0.55689	92.523	92.249	92.806	0.16835					60	17	5	0	0	0	1.0395	1	38698	38698		0.08335	0	1	17671000	+		13027	8964	6557	6586	15686	15686					0.12191465693967984
KGPQQILLIPI	11	Unmodified	_KGPQQILLIPI_					0	0	0			REV__ENSG00000104356|ENST00000401707|POP1	REV__ENSG00000104356|ENST00000401707|POP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	610.3931152224541	2	610.392273	1218.76999	1.5577	0.0009508	1.9648	0.0011993	3.5225	0.0021501	610.3934366105343	107.44	0.16061	107.44	107.33	107.49	0					21	7	4	0	0	0	1.0395	1	46037	46037		0.30703	0	1	31616000	+		13028	9135	6558	6587	15687	15687					0.16935985913437435
KGPQQILLIPI	11	Unmodified	_KGPQQILLIPI_					0	0	0			REV__ENSG00000104356|ENST00000401707|POP1	REV__ENSG00000104356|ENST00000401707|POP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	610.3947631716728	2	610.392273	1218.76999	2.6479	0.0016162	2.7895	0.0017027	5.4374	0.0033189	610.3943219415953	107.4	0.14587	107.45	107.36	107.5	0.052452					19	6	4	0	0	0	1.0395	1	45925	45925		0.30703	0.30703	1	34716000	+		13029	9135	6558	6587	15688	15688					0.16935985913437435
KGPRKKFA	8	Unmodified	_KGPRKKFA_					0	0	0		ENST00000430239.1_1_6:30664985-30665288:-|nuORF	ENST00000430239.1_1_6:30664985-30665288:-|nuORF	ENST00000430239.1_1_6:30664985-30665288:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.2964660525322	2	466.295436	930.57632	3.2937	0.0015358	-2.0583	-0.0009598	1.2353	0.00057602	466.29480201295013	88.327	0.33736	88.562	88.354	88.691	0.2347					14	10	2	0	0	0	0.89178	1	37016	37016		0.69038	0.69038	1	540970			13030	6495	6559	6588	15689	15689					0.10825493987840673
KGPRKKFA	8	Unmodified	_KGPRKKFA_					0	0	0		ENST00000430239.1_1_6:30664985-30665288:-|nuORF	ENST00000430239.1_1_6:30664985-30665288:-|nuORF	ENST00000430239.1_1_6:30664985-30665288:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	466.295436	930.57632	2.835	0.001322	-3.9145	-0.0018253	-1.0795	-0.00050336	466.2937956126073	88.457	0.29972	88.457	88.274	88.574	0	-0.052355	-0.00076693	NaN	0.69038	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517070			13031	6495	6559	6588							0.10825493987840673
KGPRSSPALP	10	Unmodified	_KGPRSSPALP_					0	0	0		MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant;ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000006432|P80192-4|MAP3K9	MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant	MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2918578982353	2	505.293091	1008.57163	2.1526	0.0010877	-3.7822	-0.0019111	-1.6296	-0.00082344	505.29024800645817	81.54	0.50581	81.54	81.288	81.794	0					48	16	5	0	0	0	0.88314	1	33905	33905		3.2813	0.28607	1	10716000			13032	506	6560	6589	15690	15690					0.06768565054414921
KGPTRLKR	8	Unmodified	_KGPTRLKR_					0	0	0			REV__nc|ENSG00000076248|P13051-2|UNG	REV__nc|ENSG00000076248|P13051-2|UNG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.3143188357353	2	478.311618	954.608683	3.5503	0.0016982	1.8895	0.00090379	5.4399	0.0026019	478.3125504843424	106.12	0.14204	106.18	106.1	106.25	0.05455					24	6	5	0	0	0	0.89187	1	45190	45190		0.69038	0	1	170220000	+		13033	14393	6561	6590	15691	15691					0.12956281390847835
KGPTRLKR	8	Unmodified	_KGPTRLKR_					0	0	0			REV__nc|ENSG00000076248|P13051-2|UNG	REV__nc|ENSG00000076248|P13051-2|UNG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3145324587822	2	478.311618	954.608683	3.2661	0.0015622	2.1976	0.0010511	5.4636	0.0026133	478.31284619259037	107.66	0.25531	107.82	107.68	107.93	0.15781					56	13	6	0	0	0	0.89187	1	46308	46308		0.69038	0	1	9410900000	+		13034	14393	6561	6590	15692	15692					0.12956281390847835
KGPTRLKR	8	Unmodified	_KGPTRLKR_					0	0	0			REV__nc|ENSG00000076248|P13051-2|UNG	REV__nc|ENSG00000076248|P13051-2|UNG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3140746951103	2	478.311618	954.608683	3.2599	0.0015593	1.3739	0.00065715	4.6338	0.0022164	478.31220303290996	106.07	0.17654	106.23	106.15	106.33	0.16174					37	9	5	0	0	0	0.89187	1	45338	45338		0.69038	0	1	747440000	+		13035	14393	6561	6590	15693	15693					0.12956281390847835
KGPVAHPC	8	Unmodified	_KGPVAHPC_					0	0	0		chr19:10923677-10924076|115|10.01|0.06|7.34|-|2|YIPF2,YIPF2|1	chr19:10923677-10924076|115|10.01|0.06|7.34|-|2|YIPF2,YIPF2|1	chr19:10923677-10924076|115|10.01|0.06|7.34|-|2|YIPF2,YIPF2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.7092773318291	2	404.710348	807.406143	-0.83448	-0.00033772	-3.2871	-0.0013303	-4.1216	-0.001668	404.70893865928093	14.199	0.46461	14.199	14.069	14.534	0					20	14	2	0	0	0	0.88958	1	5902	5902		2.8892	2.0956	1	559150			13036	222	6562	6591	15694	15694					-0.005263650060896907
KGRGRAIA	8	Unmodified	_KGRGRAIA_					0	0	0			REV__ENSG00000117318|ENST00000374561|ID3	REV__ENSG00000117318|ENST00000374561|ID3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	828.5150024294853	1	828.516245	827.508969	1.6086	0.0013328	-2.3672	-0.0019613	-0.75858	-0.00062849	828.5141476072347	70.492	0.56968	70.492	70.179	70.749	0					58	18	4	0	0	0	0.89198	2	29310	29310;29361		0	0	1	37599000	+		13037	9497	6563	6592	15695;15696	15695					0.08831463776868986
KGRGRAIA	8	Unmodified	_KGRGRAIA_					0	0	0			REV__ENSG00000117318|ENST00000374561|ID3	REV__ENSG00000117318|ENST00000374561|ID3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.7621032595634	2	414.761761	827.508969	0.47989	0.00019904	-1.2077	-0.0005009	-0.7278	-0.00030186	414.76137118485224	70.492	1.2973	70.492	70.149	71.446	0					117	41	5	0	0	0	0.89198	1	29411	29411		0	0	1	444140000	+		13038	9497	6563	6592	15697	15697					0.08831463776868986
KGRGRAIA	8	Unmodified	_KGRGRAIA_					0	0	0			REV__ENSG00000117318|ENST00000374561|ID3	REV__ENSG00000117318|ENST00000374561|ID3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	828.5157348513603	1	828.516245	827.508969	1.2702	0.0010524	-1.2814	-0.0010616	-0.011169	-9.2535E-06	828.515033073431	70.253	0.54221	70.575	70.288	70.83	0.32224					53	17	4	0	0	0	0.89198	1	29420	29420		0	0	1	34400000	+		13039	9497	6563	6592	15698	15698					0.08831463776868986
KGRGRAIA	8	Unmodified	_KGRGRAIA_					0	0	0			REV__ENSG00000117318|ENST00000374561|ID3	REV__ENSG00000117318|ENST00000374561|ID3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.7614623904228	2	414.761761	827.508969	1.4773	0.00061275	-1.5462	-0.00064132	-0.068895	-2.8575E-05	414.76118648371573	70.254	1.8125	70.576	70.192	72.005	0.32224					142	57	5	0	0	0	0.89198	2	29432	29432;29471		0	0	1	366180000	+		13040	9497	6563	6592	15699;15700	15699					0.08831463776868986
KGRNGKGG	8	Unmodified	_KGRNGKGG_					0	0	0			REV__ENSG00000204442|ENST00000375915|NALF1	REV__ENSG00000204442|ENST00000375915|NALF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	387.2844726443291	2	387.222469	772.430384	-0.67211	-0.00026026	-0.33504	-0.00012973	-1.0072	-0.00038999	387.2223624982995	107.96	0.11359	107.96	107.89	108.01	0					12	5	3	0	0	0	2.3239	1	46419	46419		2.5775	0	1	46144000	+		13041	11783	6564	6593	15701	15701					0.035066114718119934
KGRQLPRRRRR	11	Unmodified	_KGRQLPRRRRR_					0	0	0			REV__ENSG00000186790|ENST00000335071|FOXE3	REV__ENSG00000186790|ENST00000335071|FOXE3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1009094119072	4	370.489542	1477.92906	1.2009	0.00044492	-0.2387	-8.8435E-05	0.9622	0.00035649	370.74024392069424	34.583	0.37689	34.882	34.658	35.035	0.29941					21	13	2	0	0	0	0.14606	1	14561	14561		0	0	1	567240	+		13042	11511	6565	6594	15702	15702					0.2092155710474799
KGRQLPRRRRR	11	Unmodified	_KGRQLPRRRRR_					0	0	0			REV__ENSG00000186790|ENST00000335071|FOXE3	REV__ENSG00000186790|ENST00000335071|FOXE3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1016113162041	4	370.489542	1477.92906	-0.06489	-2.4041E-05	-0.077366	-2.8663E-05	-0.14226	-5.2705E-05	370.7398559657531	29.338	0.45264	30.621	30.374	30.826	1.2825					23	14	2	0	0	0	0.14606	1	12352	12352		0	0	1	1883600	+		13043	11511	6565	6594	15703	15703					0.2092155710474799
KGRQLPRRRRR	11	Unmodified	_KGRQLPRRRRR_					0	0	0			REV__ENSG00000186790|ENST00000335071|FOXE3	REV__ENSG00000186790|ENST00000335071|FOXE3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1011535525322	4	370.489542	1477.92906	0.53243	0.00019726	-0.34883	-0.00012924	0.18359	6.802E-05	370.74040729115336	31.531	0.57844	33.355	32.958	33.536	1.8246					30	20	2	0	0	0	0.14606	1	13204	13204		0	0	1	958470	+		13044	11511	6565	6594	15704	15704					0.2092155710474799
KGRRRLVP	8	Unmodified	_KGRRRLVP_					0	0	0			REV__nc|ENSG00000165671|Q96L73-2|NSD1	REV__nc|ENSG00000165671|Q96L73-2|NSD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3233215212822	2	491.32506	980.635566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.001	1	99.226	98.726	99.726	0.22545								0	0	0	1.0178	1	41659	41659		0.79363	0	1		+		13045	10790	6566	6595	15705	15705					0.1444739000202162
KGRRSRTVF	9	Unmodified	_KGRRSRTVF_					0	0	0		ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8307983279228	2	553.830706	1105.64686	2.0306	0.0011246	-0.75446	-0.00041784	1.2761	0.00070677	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.82604	1	30114	30114		2.3027	0	1	7375800			13046	2500	6567	6596	15706	15706					0.09826167305527633
KGRRSRTVF	9	Unmodified	_KGRRSRTVF_					0	0	0		ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8299438357353	2	553.830706	1105.64686	1.5125	0.00083768	-0.44136	-0.00024444	1.0712	0.00059324	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.77526	1	29920	29920		4.3292	0	1	5931400			13047	2500	6567	6596	15707	15707					0.09826167305527633
KGSIKANR	8	Unmodified	_KGSIKANR_					0	0	0		tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	437.6025878787041	2	437.266876	872.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.195	1	37.012	36.512	37.512	1.8176								0	0	0	1.0178	1	14757	14757		7.2892	2.5332	1				13048	16422	6568	6597	15708	15708					0.07784026711453862
KGSKARTR	8	Unmodified	_KGSKARTR_					0	0	0			REV__tr|A0A7D6ZWU4|A0A7D6ZWU4_9CLOTNucleaseSbcCDsubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_19315PE=3SV=1	REV__tr|A0A7D6ZWU4|A0A7D6ZWU4_9CLOTNucleaseSbcCDsubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_19315PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2784301638603	2	452.277775	902.540997	1.8084	0.00081792	0.049806	2.2526E-05	1.8583	0.00084045	452.27761063232845	74.913	0.4391	74.913	74.683	75.122	0					42	13	4	0	0	0	0.89051	1	31182	31182		2.3027	2.3027	1	10858000	+		13049	15752	6569	6598	15709	15709					0.08582831460034868
KGSRFFHH	8	Unmodified	_KGSRFFHH_					0	0	0			REV__ENST00000356352.6_1_10:12071104-12071191:-|nuORF	REV__ENST00000356352.6_1_10:12071104-12071191:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.1794006228447	3	339.178871	1014.51478	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.673	1	91.863	91.363	92.363	0.19042								0	0	0	1.0178	1	38395	38395		0.45834	0	1		+		13050	12548	6570	6599	15710	15710					0.008105622885636876
KGVEVATVR	9	Unmodified	_KGVEVATVR_					0	0	0			REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.1619445681572	3	320.194186	957.56073	-1.5338	-0.00049112	-0.62775	-0.000201	-2.1616	-0.00069212	320.1935700637348	11.833	0.15466	12.526	12.448	12.602	0.69396					9	4	3	0	0	0	0.11916	1	4899	4899		2.2828	0	1	1203700	+		13051	9875	6571	6600	15711	15711					0.0802516268013278
KGVEVATVR	9	Unmodified	_KGVEVATVR_					0	0	0			REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	REV__nc|ENSG00000133422|Q9Y6X9-2|MORC2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	320.194186	957.56073	-0.573	-0.00018347	-2.5965	-0.0008314	-3.1695	-0.0010149	320.1930733438196	11.713	0.094868	12.5	12.442	12.536	0.78751	-0.013149	-0.00072906	NaN	2.2828	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	720880	+		13052	9875	6571	6600							0.0802516268013278
KGVRVIDRNV	10	Unmodified	_KGVRVIDRNV_					0	0	0		tr|A0A553SN31|A0A553SN31_NIACIDUF2922domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23580PE=4SV=1	tr|A0A553SN31|A0A553SN31_NIACIDUF2922domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23580PE=4SV=1	tr|A0A553SN31|A0A553SN31_NIACIDUF2922domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23580PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1538574099541	3	385.903406	1154.68839	2.0285	0.00078279	-2.5999	-0.0010033	-0.57147	-0.00022053	386.2372664955086	55.328	0.096527	55.649	55.579	55.675	0.32088					4	2	2	0	0	0	0.12559	1	23157	23157		0.77653	0.078866	1	248390			13053	16410	6572	6601	15712	15712					0.11723303274152386
KGVVPVPG	8	Unmodified	_KGVVPVPG_					0	0	0			REV__ENSG00000100599|ENST00000216487|RIN3	REV__ENSG00000100599|ENST00000216487|RIN3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	377.1969482302666	2	376.736889	751.459225	2.4757	0.0009327	3.3314	0.001255	5.8071	0.0021877	376.73873606033504	87.39	0.36046	87.634	87.412	87.772	0.24387					17	11	2	0	0	0	2.3239	1	36582	36582		0.79363	0	1	649850			13054	8999	6573	6602	15713	15713					0.0735533604823786
KGWPRLLG	8	Unmodified	_KGWPRLLG_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	309.5242492556572	3	309.523867	925.549771	0.040203	1.2444E-05	1.8141	0.00056149	1.8543	0.00057394	309.5243512823049	22.676	0.71508	22.909	22.504	23.219	0.23306					55	23	4	0	0	0	0.89156	1	9454	9454		1.4819	0	1	10776000	+		13055	14200	6574	6603	15714	15714					0.08401805096502812
KGWPRLLG	8	Unmodified	_KGWPRLLG_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5241882205009	3	309.523867	925.549771	-0.21079	-6.5244E-05	1.4785	0.00045763	1.2677	0.00039238	309.52426002430934	21.46	0.44779	23.076	22.784	23.232	1.6158					49	14	4	0	0	0	0.89156	1	8907	8907		1.4819	0	1	8765000	+		13056	14200	6574	6603	15715	15715					0.08401805096502812
KGWPRLLG	8	Unmodified	_KGWPRLLG_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|304|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	309.523867	925.549771	0.040203	1.2444E-05	1.8141	0.00056149	1.8543	0.00057394	309.5243512823049	22.676	0.71508	22.909	22.504	23.219	0.23306	-0.083554	0.00019632	NaN	1.4819	55	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10776000	+		13057	14200	6574	6603							0.08401805096502812
KGWRRRRWRRR	11	Unmodified	_KGWRRRRWRRR_					0	0	0		ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	834.6121703982353	2	835.003974	1667.99339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.145	1	98.236	97.736	98.736	0.090881								0	0	0	0.63775	1	41066	41066		0.30703	0.30703	1				13058	7526	6575	6604	15716	15716					0.18611756981545113
KHAFRYWWP	9	Unmodified	_KHAFRYWWP_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8898803591728	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.999	1	44.999	44.499	45.499	0								0	0	0	0.42693	1	18832	18832		0.26902	0.033176	1		+		13059	10949	6576	6605	15717	15717					0.0125595293659444
KHAFRYWWP	9	Unmodified	_KHAFRYWWP_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.757	1	77.757	77.257	78.257	0								0	0	0	0.42693	1	32371	32371		0.26902	0.033176	1		+		13060	10949	6576	6605	15718	15718					0.0125595293659444
KHAFRYWWP	9	Unmodified	_KHAFRYWWP_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8895751833916	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.593	1	62.923	62.423	63.423	0.32974								0	0	0	0.42693	1	26225	26225		0.26902	0.033176	1		+		13061	10949	6576	6605	15719	15719					0.0125595293659444
KHAFRYWWP	9	Unmodified	_KHAFRYWWP_					0	0	0			REV__nc|ENSG00000169432|Q15858-4|SCN9A	REV__nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8890869021416	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.654	1	68.976	68.476	69.476	0.32224								0	0	0	0.42693	1	28739	28739		0.26902	0.033176	1		+		13062	10949	6576	6605	15720	15720					0.0125595293659444
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1982604861259	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.954	1	33.248	32.748	33.748	0.29431								0	0	0	1.0178	1	13837	13837		0.45834	0	1		+		13063	15766	6577	6606	15721	15721					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1993286013603	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.069	1	33.363	32.863	33.863	0.29431								0	0	0	1.0178	1	13886	13886		0.45834	0	1		+		13064	15766	6577	6606	15722	15722					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1993896365166	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.183	1	33.477	32.977	33.977	0.29431								0	0	0	1.0178	1	13934	13934		0.45834	0	1		+		13065	15766	6577	6606	15723	15723					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1993896365166	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.396	1	33.693	33.193	34.193	0.29701								0	0	0	1.0178	1	14023	14023		0.45834	0	1		+		13066	15766	6577	6606	15724	15724					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1993286013603	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.516	1	33.813	33.313	34.313	0.29701								0	0	0	1.0178	1	14073	14073		0.45834	0	1		+		13067	15766	6577	6606	15725	15725					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1988708376884	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.72	1	34.017	33.517	34.517	0.29701								0	0	0	1.0178	1	14159	14159		0.45834	0	1		+		13068	15766	6577	6606	15726	15726					0.119294939878273
KHALRIVA	8	Unmodified	_KHALRIVA_					0	0	0			REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	REV__tr|A0A7D6ZXV1|A0A7D6ZXV1_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1991454958916	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.965	1	34.262	33.762	34.762	0.29701								0	0	0	1.0178	1	14262	14262		0.45834	0	1		+		13069	15766	6577	6606	15727	15727					0.119294939878273
KHAVTTSK	8	Unmodified	_KHAVTTSK_					0	0	0		ENST00000416322.5_1_7:90013079-90014465:+|nuORF;nc|ENSG00000105793|A4D1E9-2|GTPBP10;ENSG00000105793|ENST00000222511|GTPBP10;ACADS-GTPBP10|2|fusion;ACADS-GTPBP10|1|fusion	ENST00000416322.5_1_7:90013079-90014465:+|nuORF	ENST00000416322.5_1_7:90013079-90014465:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.2544738650322	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.79	1	103.95	103.45	104.45	0.16055								0	0	0	1.0178	1	43838	43838		0.6015	0	1				13070	15	6578	6607	15728	15728					0.05188918100270712
KHDESLWNN	9	Unmodified	_KHDESLWNN_					0	0	0		tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5118591189384	3	381.512355	1141.51524	-0.75121	-0.0002866	0.49376	0.00018837	-0.25745	-9.8222E-05	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.49297	1	12874	12874		15.739	2.1238	1	2428000			13071	16183	6579	6608	15729	15729					-0.04986107572904075
KHICWVLLKKF	11	Unmodified	_KHICWVLLKKF_					0	0	0		ENSG00000163012|ENST00000295131|ZSWIM2	ENSG00000163012|ENST00000295131|ZSWIM2	ENSG00000163012|ENST00000295131|ZSWIM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2859985232353	3	472.284571	1413.83188	3.4754	0.0016414	-2.797	-0.001321	0.6783	0.00032035	472.2831570807174	97.604	0.12686	97.695	97.62	97.747	0.090881					7	3	3	0	0	0	1.0366	1	40836	40836		0.40827	0	1	2416400			13072	3658	6580	6609	15730	15730					0.14152014060869078
KHINRKKHINL	11	Unmodified	_KHINRKKHINL_					0	0	0		tr|A0A553SMT7|A0A553SMT7_NIACIPyruvateformate-lyase-activatingenzymeOS=NialliacirculansOX=1397GN=pflAPE=3SV=1	tr|A0A553SMT7|A0A553SMT7_NIACIPyruvateformate-lyase-activatingenzymeOS=NialliacirculansOX=1397GN=pflAPE=3SV=1	tr|A0A553SMT7|A0A553SMT7_NIACIPyruvateformate-lyase-activatingenzymeOS=NialliacirculansOX=1397GN=pflAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.6252014040947	3	467.624755	1399.85244	3.4289	0.0016034	-2.628	-0.0012289	0.80087	0.00037451	467.623402059131	97.228	0.21989	97.319	97.18	97.399	0.090881					19	6	4	0	0	0	1.039	1	40713	40713		0.45452	0.046251	1	50779000			13073	16392	6581	6610	15731	15731					0.16850320764933713
KHKLKWQRIS	10	Unmodified	_KHKLKWQRIS_					0	0	0			REV__nc|ENSG00000100629|Q6ZU80-1|CEP128	REV__nc|ENSG00000100629|Q6ZU80-1|CEP128	MSMS	GG20161007_CRH_Patient100_W632_02	4	441.9410278201103	3	441.938451	1322.79352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.889	1	43.781	43.281	44.281	1.8927								0	0	0	0.66227	1	17553	17553		0.62683	0.12087	1		+		13074	9001	6582	6611	15732	15732					0.1450384447059605
KHKMALKHA	9	Unmodified	_KHKMALKHA_					0	0	0			REV__nc|ENSG00000168952|Q8NFX7-3|STXBP6	REV__nc|ENSG00000168952|Q8NFX7-3|STXBP6	MSMS	GG20161007_CRH_Patient100_A02_01	1	355.2093383669853	3	355.211294	1062.61205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.49	103.99	104.99	0								0	0	0	0.42693	1	44111	44111		0.23584	0.028987	1		+		13075	10926	6583	6612	15733	15733					0.08325208173187093
KHKMWLPIPFP	11	Unmodified	_KHKMWLPIPFP_					0	0	0			REV__ENST00000378962.3_1_X:30578303-30578414:-|nuORF	REV__ENST00000378962.3_1_X:30578303-30578414:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	697.3987304568291	2	697.394293	1392.77403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.549	1	85.549	85.049	86.049	0								0	0	0	0.63775	1	35644	35644		1.3295	0.13619	1		+		13076	12744	6584	6613	15734	15734					0.09335752135484654
KHKRRSAQKKR	11	Unmodified	_KHKRRSAQKKR_					0	0	0			REV__ENST00000560184.5_1_15:90408823-90437190:-|nuORF	REV__ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	711.9504272341728	2	711.947467	1421.88038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.736	1	25.988	25.488	26.488	0.25197								0	0	0	0.63775	1	10747	10747		1.1933	0.88631	1		+		13077	13895	6585	6614	15735	15735					0.18631643744993198
KHLKEEIERK	10	Unmodified	_KHLKEEIERK_					0	0	0			REV__nc|ENSG00000170502|Q9BW91-2|NUDT9	REV__nc|ENSG00000170502|Q9BW91-2|NUDT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2590515017509	3	437.257738	1308.75138	2.8317	0.0012382	-1.0109	-0.00044201	1.8208	0.00079617	437.2571912072493	80.173	0.67706	81.424	81.293	81.971	1.2512					25	21	2	0	0	0	0.89803	1	33678	33678		0.69767	0	1	723310	+		13078	10988	6586	6615	15736	15736					0.10935824271518868
KHLRKLAIV	9	Unmodified	_KHLRKLAIV_					0	0	0			REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3666869997978	2	539.366393	1076.71823	2.7852	0.0015023	-1.0166	-0.0005483	1.7687	0.00095396	539.3657525559325	107.58	0.23155	107.63	107.5	107.73	0.052452					44	11	5	0	0	0	0.85403	1	46087	46087		0	0	1	671780000	+		13079	9219	6587	6616	15737	15737					0.18294287010144217
KHLRKLAIV	9	Unmodified	_KHLRKLAIV_					0	0	0			REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3657104372978	2	539.366393	1076.71823	3.3433	0.0018033	-3.0598	-0.0016503	0.28356	0.00015294	539.3646725262344	107.55	0.24686	107.71	107.54	107.79	0.15796					45	12	5	0	0	0	0.85403	1	46252	46252		0	0	1	1319000000	+		13080	9219	6587	6616	15738	15738					0.18294287010144217
KHNTPGCCGPK	11	Unmodified	_KHNTPGCCGPK_					0	0	0			REV__ENST00000409786.1_1_2:171570143-171571073:-|nuORF	REV__ENST00000409786.1_1_2:171570143-171571073:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5123474001884	3	381.179554	1140.51683	-1.5649	-0.0005965	-0.88627	-0.00033783	-2.4511	-0.00093433	381.5126641813179	11.436	6.546	11.436	10.986	17.532	0					581	210	4	0	0	0	0.21888	6	5884	4764;5467;5651;5884;5976;6262		38.559	9.1216	1	26123000	+		13081	12918	6588	6617	15739;15740;15741;15742;15743;15744	15742					-0.04780513080163473
KHNTPGCCGPK	11	Unmodified	_KHNTPGCCGPK_					0	0	0			REV__ENST00000409786.1_1_2:171570143-171571073:-|nuORF	REV__ENST00000409786.1_1_2:171570143-171571073:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119201540947	3	381.179554	1140.51683	-1.1715	-0.00044655	-0.07462	-2.8444E-05	-1.2461	-0.000475	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.26317	11	9641	7050;7497;8457;8796;9054;9641;9874;10557;10744;11400;12178		35.08	14.499	1	7559600	+		13082	12918	6588	6617	15745;15746;15747;15748;15749;15750;15751;15752;15753;15754;15755	15750					-0.04780513080163473
KHPVLLLH	8	Unmodified	_KHPVLLLH_					0	0	0		nc|ENSG00000198682|O95340|PAPSS2;ENSG00000198682|ENST00000456849|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	319.5405151247978	3	319.539517	955.596721	-0.11125	-3.5548E-05	2.7911	0.00089187	2.6799	0.00085632	319.5403848315546	23.233	0.95053	24.884	24.259	25.209	1.6511					40	30	2	0	0	0	0.89124	1	9733	9733		1.8442	0	1	1006500			13083	5067	6589	6618	15756	15756					0.11714664647661266
KHPVLLLH	8	Unmodified	_KHPVLLLH_					0	0	0		nc|ENSG00000198682|O95340|PAPSS2;ENSG00000198682|ENST00000456849|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	319.539517	955.596721	0.16842	5.3818E-05	2.5179	0.00080458	2.6864	0.0008584	319.54029246323904	24.874	0.97704	25.123	24.509	25.486	0.2491	0.13923	0.00014071	NaN	1.8442	56	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	701400			13084	5067	6589	6618							0.11714664647661266
KHPVLLLH	8	Unmodified	_KHPVLLLH_					0	0	0		nc|ENSG00000198682|O95340|PAPSS2;ENSG00000198682|ENST00000456849|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	nc|ENSG00000198682|O95340|PAPSS2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	319.539517	955.596721	0.060727	1.9405E-05	1.7753	0.00056727	1.836	0.00058668	319.54010266788686	23.702	0.46095	24.943	24.745	25.206	1.241	-0.040053	-0.00057121	NaN	1.8442	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	779830			13085	5067	6589	6618							0.11714664647661266
KHQRLIRAE	9	Unmodified	_KHQRLIRAE_					0	0	0			REV__nc|ENSG00000102385|Q13474-2|DRP2	REV__nc|ENSG00000102385|Q13474-2|DRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8431884646416	2	575.843813	1149.67307	1.8258	0.0010514	-0.22419	-0.0001291	1.6016	0.00092228	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.84195	1	30358	30358		1.6526	0	1	2554000	+		13086	9071	6590	6619	15757	15757					0.10422436476960684
KHRILIINPK	10	Unmodified	_KHRILIINPK_					0	0	0		tr|A0A553SKY5|A0A553SKY5_NIACIProbablebutyratekinaseOS=NialliacirculansOX=1397GN=bukPE=3SV=1	tr|A0A553SKY5|A0A553SKY5_NIACIProbablebutyratekinaseOS=NialliacirculansOX=1397GN=bukPE=3SV=1	tr|A0A553SKY5|A0A553SKY5_NIACIProbablebutyratekinaseOS=NialliacirculansOX=1397GN=bukPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2736694216728	3	411.27143	1230.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.98	1	104.16	103.66	104.66	0.1731								0	0	0	0.66254	1	43911	43911		0.15932	0	1				13087	16314	6591	6620	15758	15758					0.18629630101690964
KHRKRRAPVFK	11	Unmodified	_KHRKRRAPVFK_					0	0	0		nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	nc|nan|F2Z3F1|C5orf67	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9493286013603	2	711.949479	1421.8844	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.947	1	32.947	32.447	33.447	0								0	0	0	0.63775	1	13802	13802		2.9952	0	1				13088	8032	6592	6621	15759	15759					0.19033733238711648
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4831420779228	4	359.48366	1433.90553	-1.4661	-0.00052705	0.70686	0.00025411	-0.75927	-0.00027294	359.4837822059677	28.892	0.82907	28.892	28.287	29.116	0					91	26	6	0	0	0	1.0402	1	12159	12159		0.094841	0.011491	1	19242000			13089	4960	6593	6622	15760	15760					0.20593698547577333
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4831725955009	4	359.48366	1433.90553	-1.3554	-0.00048724	0.4002	0.00014387	-0.9552	-0.00034338	359.4837626090117	31.334	2.3411	31.334	30.039	32.38	0					164	75	4	0	0	0	1.0402	2	13199	13199;13373		0.094841	0.011491	1	27624000			13090	4960	6593	6622	15761;15762	15761					0.20593698547577333
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4822570681572	4	359.48366	1433.90553	-1.2357	-0.0004442	0.51284	0.00018436	-0.72282	-0.00025984	359.4832635198668	34.499	1.0096	34.499	34.008	35.018	0					50	32	2	0	0	0	1.0402	1	14541	14541		0.094841	0.011491	1	1107700			13091	4960	6593	6622	15763	15763					0.20593698547577333
KHRRKQKTPKK	11	Unmodified	_KHRRKQKTPKK_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7333862185478	4	359.48366	1433.90553	-0.066736	-2.399E-05	-3.1575	-0.0011351	-3.2242	-0.0011591	359.48226636142175	27.051	1.1533	28.323	28.115	29.268	1.2715					101	37	4	0	0	0	1.0402	1	11395	11395		0.094841	0.011491	1	17114000			13092	4960	6593	6622	15764	15764					0.20593698547577333
KHRVIPWL	8	Unmodified	_KHRVIPWL_					0	0	0		ENST00000484345.1_1_22:44559764-44563976:+|nuORF	ENST00000484345.1_1_22:44559764-44563976:+|nuORF	ENST00000484345.1_1_22:44559764-44563976:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2190429568291	3	350.218666	1047.63417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.154	1	62.484	61.984	62.984	0.32974								0	0	0	1.0178	1	26040	26040		0.45834	0.057624	1				13093	6849	6594	6623	15765	15765					0.1122575591327859
KHSEMHYK	8	Unmodified	_KHSEMHYK_					0	0	0			REV__ZNF281|p.R334S|1|0.07|ENSG00000162702|chr1:200408704-200408704|T/G|missense_variant	REV__ZNF281|p.R334S|1|0.07|ENSG00000162702|chr1:200408704-200408704|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	353.1922180056572	3	353.839526	1058.49675	1.3342	0.00047211	0.21604	7.6444E-05	1.5503	0.00054855	353.8395124791854	65.756	0.26991	67.664	67.529	67.799	1.9085					14	8	2	0	0	0	2.3239	1	27639	27639		1.4819	0	1	386840	+		13094	15940	6595	6624	15766	15766					-0.030159407484688927
KHSERHHK	8	Unmodified	_KHSERHHK_					0	0	0		ENSG00000185522|ENST00000329451|LMNTD2	ENSG00000185522|ENST00000329451|LMNTD2	ENSG00000185522|ENST00000329451|LMNTD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	353.1921874880791	3	353.524929	1057.55296	1.3502	0.00047733	0.96225	0.00034018	2.3124	0.00081751	353.5251830392494	65.537	0.33594	67.446	67.28	67.616	1.9085					17	10	2	0	0	0	2.3239	1	27538	27538		1.4819	0.51963	1	1325100			13095	4750	6596	6625	15767	15767					0.026484482032174128
KHSYNENSFK	10	Unmodified	_KHSYNENSFK_					0	0	0			REV__tr|A0A553SMF4|A0A553SMF4_NIACIABMdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22465PE=4SV=1	REV__tr|A0A553SMF4|A0A553SMF4_NIACIABMdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	418.53516	1252.58365	-0.52575	-0.00022005	2.3118	0.00096759	1.7861	0.00074754	418.53640812061104	12.361	0.24962	12.361	12.188	12.438	0					15	7	3	0	0	0	0.12557	1	5071	5071		1.7423	0.14999	1	687560	+		13096	15016	6597	6626	15768	15768					-0.03253862993074108
KHWHEPGNH	9	Unmodified	_KHWHEPGNH_					0	0	0			REV__ENST00000518231.1_1_8:86376310-86386082:+|nuORF	REV__ENST00000518231.1_1_8:86376310-86386082:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1811096072197	3	381.181051	1140.52132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.648	1	68.648	68.148	69.148	0								0	0	0	0.34279	1	28588	28588		14.405	0.88672	1		+		13097	9130	6598	6627	15769	15769					-0.043315445507460026
KIADFGWSV	9	Unmodified	_KIADFGWSV_					0	0	0		nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-4|AURKB;ENSG00000105146|ENST00000302804|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;chr17:8206934-8207318|422|22.16|0.54|5.36|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB;ENSG00000087586|ENST00000395915|AURKA;chr20:56388202-56391943|390|12.24|0.53|4.54|-|ENST00000347343|AURKA,AURKA	nc|ENSG00000105146|Q9UQB9-2|AURKC	nc|ENSG00000105146|Q9UQB9-2|AURKC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.7709228396416	2	511.768917	1021.52328	2.0892	0.0010692	1.0212	0.00052261	3.1104	0.0015918	511.7695314222664	56.706	0.32081	56.706	56.546	56.866	0					24	10	3	0	0	0	0.075994	2	23633	23633;23683		57.722	15.882	1	2955000			13098	219	6599	6628	15770;15771	15770					0.013380714145228012
KIADFGWSV	9	Unmodified	_KIADFGWSV_					0	0	0		nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-4|AURKB;ENSG00000105146|ENST00000302804|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;chr17:8206934-8207318|422|22.16|0.54|5.36|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB;ENSG00000087586|ENST00000395915|AURKA;chr20:56388202-56391943|390|12.24|0.53|4.54|-|ENST00000347343|AURKA,AURKA	nc|ENSG00000105146|Q9UQB9-2|AURKC	nc|ENSG00000105146|Q9UQB9-2|AURKC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.7703124880791	2	511.768917	1021.52328	2.3336	0.0011943	1.0741	0.0005497	3.4077	0.001744	511.7693410790434	56.254	0.28078	56.575	56.391	56.672	0.32103					22	9	3	0	0	0	0.075994	2	23580	23530;23580		57.722	19.748	1	3203400			13099	219	6599	6628	15772;15773	15773					0.013380714145228012
KIADFGWSV	9	Unmodified	_KIADFGWSV_					0	0	0		nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-4|AURKB;ENSG00000105146|ENST00000302804|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;chr17:8206934-8207318|422|22.16|0.54|5.36|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB;ENSG00000087586|ENST00000395915|AURKA;chr20:56388202-56391943|390|12.24|0.53|4.54|-|ENST00000347343|AURKA,AURKA	nc|ENSG00000105146|Q9UQB9-2|AURKC	nc|ENSG00000105146|Q9UQB9-2|AURKC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7693359255791	2	511.768917	1021.52328	1.8311	0.00093709	0.12745	6.5224E-05	1.9585	0.0010023	511.7688898251269	55.051	0.4286	56.456	56.182	56.611	1.4048					38	14	4	0	0	0	0.053939	2	23003	23003;23054		66.457	30.412	1	11559000			13100	219	6599	6628	15774;15775	15774					0.013380714145228012
KIADFGWSV	9	Unmodified	_KIADFGWSV_					0	0	0		nc|ENSG00000105146|Q9UQB9-2|AURKC;nc|ENSG00000105146|Q9UQB9-3|AURKC;nc|ENSG00000178999|Q96GD4-4|AURKB;ENSG00000105146|ENST00000302804|AURKC;nc|ENSG00000178999|Q96GD4-2|AURKB;chr17:8206934-8207318|422|22.16|0.54|5.36|-|ENST00000578549|AURKB,AURKB;ENSG00000178999|ENST00000585124|AURKB;nc|ENSG00000178999|Q96GD4-5|AURKB;ENSG00000087586|ENST00000395915|AURKA;chr20:56388202-56391943|390|12.24|0.53|4.54|-|ENST00000347343|AURKA,AURKA	nc|ENSG00000105146|Q9UQB9-2|AURKC	nc|ENSG00000105146|Q9UQB9-2|AURKC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7698852419853	2	511.768917	1021.52328	2.0789	0.0010639	-0.36292	-0.00018573	1.716	0.0008782	511.7686875585433	54.573	0.4046	56.541	56.318	56.722	1.9684					31	13	3	0	0	0	0.031145	3	22856	22811;22856;22909		85.642	37.296	1	8730500			13101	219	6599	6628	15776;15777;15778	15777					0.013380714145228012
KIAECLLGS	9	Unmodified	_KIAECLLGS_					0	0	0		ENSG00000168263|ENST00000382082|KCNV2	ENSG00000168263|ENST00000382082|KCNV2	ENSG00000168263|ENST00000382082|KCNV2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1348144412041	3	311.840644	932.500103	0.7948	0.00024785	0.93521	0.00029164	1.73	0.00053949	311.84091160274414	67.981	0.4568	69.359	69.096	69.553	1.3778					23	14	2	0	0	0	0.11941	1	28552	28552		0.23584	0.028987	1	542410			13102	4024	6600	6629	15779	15779					0.031153093055422687
KIDALNENK	9	Unmodified	_KIDALNENK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7889282107353	2	522.787838	1043.56112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.137	1	12.226	11.726	12.726	0.089381								0	0	0	0.2924	1	5036	5036		19.362	6.3195	1			+	13103	339	6601	6630	15780	15780					0.04108537609317864
KIEELLKGWKL	11	Unmodified	_KIEELLKGWKL_					0	0	0		tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.9498474001884	3	452.946501	1355.81767	1.5044	0.00068141	2.9101	0.0013181	4.4145	0.0019995	452.9478187204065	96.719	0.22778	96.719	96.602	96.83	0					28	7	5	0	0	0	1.0174	1	40407	40407		1.1098	0.48293	1	52695000			13104	16710	6602	6631	15781	15781					0.15399640113628266
KIEELLKGWKL	11	Unmodified	_KIEELLKGWKL_					0	0	0		tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.9513732790947	3	452.946501	1355.81767	4.0753	0.0018459	3.5904	0.0016263	7.6657	0.0034722	452.94801972459794	96.428	0.24746	96.712	96.589	96.837	0.28442					22	7	4	0	0	0	0.98155	1	40562	40562		2.2527	0.34635	1	17590000			13105	16710	6602	6631	15782	15782					0.15399640113628266
KIEELLKGWKL	11	Unmodified	_KIEELLKGWKL_					0	0	0		tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	tr|A0A7D6VM95|A0A7D6VM95_9CLOTTranscriptionantiterminationproteinNusBOS=ClostridiumintestinaleOX=36845GN=nusBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	452.946501	1355.81767	3.2895	0.00149	2.9125	0.0013192	6.2021	0.0028092	452.94779924096184	96.665	0.27547	96.77	96.635	96.91	0.105	0.035898	-0.00012504	NaN	2.2527	28	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51818000			13106	16710	6602	6631							0.15399640113628266
KIEGTRENIWF	11	Unmodified	_KIEGTRENIWF_					0	0	0			REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	REV__PCDHA10|p.T460Sfs*119|1|0.04|ENSG00000250120|chr5:140857426-140857427|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	464.3025695681572	3	464.91386	1391.71975	3.5599	0.001655	0.72731	0.00033814	4.2872	0.0019932	464.91491108204434	96.279	0.12029	96.681	96.609	96.729	0.40208					5	3	2	0	0	0	0.14606	1	40488	40488		2.2527	1.2392	1	476790	+		13107	14594	6603	6632	15783	15783					0.03955831517600927
KIEINIRTS	9	Unmodified	_KIEINIRTS_					0	0	0		ENST00000544750.1_1_11:113745483-113745573:-|nuORF	ENST00000544750.1_1_11:113745483-113745573:-|nuORF	ENST00000544750.1_1_11:113745483-113745573:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8218871951103	2	537.319306	1072.62406	2.5161	0.0013519	2.0897	0.0011228	4.6058	0.0024748	537.3208938949566	49.843	1.1576	51.234	50.58	51.737	1.3911					125	36	6	0	0	0	0.25667	1	20962	20962		27.629	0	1	111900000			13108	7232	6604	6633	15784	15784					0.09065103397369967
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9125854372978	2	685.911362	1369.80817	2.3185	0.0015903	-4.0378	-0.0027696	-1.7193	-0.0011793	685.9087963366884	82.07	0.57706	82.07	81.885	82.462	0					36	18	3	0	0	0	1.0366	1	34161	34161		1.1933	0.735	1	1179000	+		13109	9470	6605	6634	15785	15785					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9113647341728	2	685.911362	1369.80817	2.3623	0.0016203	-2.0419	-0.0014005	0.32044	0.00021979	685.90973071854	83.881	0.61884	84.141	83.947	84.565	0.26083					36	19	3	0	0	0	1.0366	1	35080	35080		1.1933	0.735	1	994360	+		13110	9470	6605	6634	15786	15786					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9069091677666	2	685.911362	1369.80817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.433	1	82.713	82.213	83.213	0.2802								0	0	0	0.63775	1	34470	34470		1.1933	0.79263	1		+		13111	9470	6605	6634	15787	15787					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9095947146416	2	685.911362	1369.80817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.219	1	85.387	84.887	85.887	1.168								0	0	0	0.63775	1	35341	35341		1.1933	0.23107	1		+		13112	9470	6605	6634	15788	15788					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9094116091728	2	685.911362	1369.80817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.811	1	85.97	85.47	86.47	1.159								0	0	0	0.63775	1	35588	35588		2.7352	1.4057	1		+		13113	9470	6605	6634	15789	15789					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9103881716728	2	685.911362	1369.80817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.936	1	86.095	85.595	86.595	1.159								0	0	0	0.63775	1	35641	35641		2.7352	1.0826	1		+		13114	9470	6605	6634	15790	15790					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.9127075076103	2	685.911362	1369.80817	1.6306	0.0011185	-3.6635	-0.0025128	-2.0328	-0.0013943	685.9088144080557	84.208	1.3885	85.817	85.138	86.527	1.6088					100	45	3	0	0	0	1.0174	4	35254	35154;35254;35404;35454		2.7352	1.4057	1	6001400	+		13115	9470	6605	6634	15791;15792;15793;15794	15792					0.13805871828071759
KIEIREVKIGW	11	Unmodified	_KIEIREVKIGW_					0	0	0			REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	REV__nc|ENSG00000116218|Q9NP85-2|NPHS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	685.911362	1369.80817	1.6306	0.0011185	-3.6635	-0.0025128	-2.0328	-0.0013943	685.9088144080557	84.208	1.3885	85.817	85.138	86.527	1.6088	-0.15465	0.00070287	NaN	2.7352	100	45	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6001400	+		13116	9470	6605	6634							0.13805871828071759
KIELAHLVLAL	11	Unmodified	_KIELAHLVLAL_					0	0	0			REV__ENSG00000244219|ENST00000431679|TMEM225B	REV__ENSG00000244219|ENST00000431679|TMEM225B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.3942138552666	2	610.392273	1218.76999	3.207	0.0019576	-2.6045	-0.0015898	0.60251	0.00036777	610.3907178277323	105.92	0.16025	106.08	105.97	106.13	0.16679					28	7	5	0	0	0	1.0131	1	45138	45138		2.9952	1.5133	1	477750000	+		13117	11938	6606	6635	15795	15795					0.16935985913414697
KIEPVKEIVDI	11	Unmodified	_KIEPVKEIVDI_					0	0	0		tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	tr|A0A553SFD1|A0A553SFD1_NIACIPeptidaseTOS=NialliacirculansOX=1397GN=pepTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8832275271416	2	641.884478	1281.7544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.273	1	82.273	81.773	82.773	0								0	0	0	0.63775	1	34274	34274		2.2828	0.80087	1				13118	16049	6607	6636	15796	15796					0.1247965460568139
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	709.4477416872978	2	709.446769	1416.87898	1.6571	0.0011756	-1.8646	-0.0013228	-0.20756	-0.00014725	709.445677581872	97.243	0.15581	97.243	97.165	97.321	0					11	4	3	0	0	0	0.89803	1	40660	40660		1.4819	1.4819	1	10556000			13119	16131	6608	6637	15797	15797					0.18722009656244154
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.3008605837822	3	473.300271	1416.87898	3.4806	0.0016474	-3.1361	-0.0014843	0.34449	0.00016305	473.29880412090347	97.228	0.25059	97.319	97.149	97.399	0.090881					24	7	5	0	0	0	0.89803	1	40665	40665		0.62683	0.17231	1	47280000			13120	16131	6608	6637	15798	15798					0.18722009656244154
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	709.4476196169853	2	709.446769	1416.87898	2.6776	0.0018996	-2.4324	-0.0017257	0.2452	0.00017396	709.4451641240987	97.228	0.15767	97.319	97.21	97.367	0.090881					14	4	4	0	0	0	0.89803	1	40669	40669		1.4819	0.28856	1	13623000			13121	16131	6608	6637	15799	15799					0.18722009656244154
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.6345703005791	3	473.300271	1416.87898	3.9197	0.0018552	-2.5482	-0.0012061	1.3715	0.00064913	473.2989191144262	97.032	0.14828	97.317	97.242	97.39	0.28442					15	5	4	0	0	0	0.89803	1	40820	40820		0.62683	0.12087	1	14494000			13122	16131	6608	6637	15800	15800					0.18722009656244154
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	473.300271	1416.87898	2.0149	0.00095367	-1.6156	-0.00076465	0.39937	0.00018902	473.2994215076314	97.245	0.18723	97.245	97.165	97.353	0	-0.032597	0.0012549	NaN	0.62683	20	5	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37318000			13123	16131	6608	6637							0.18722009656244154
KIERYIRRKR	10	Unmodified	_KIERYIRRKR_					0	0	0		tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	tr|A0A553SH33|A0A553SH33_NIACIOligoribonucleaseOS=NialliacirculansOX=1397GN=CEQ21_12080PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	473.300271	1416.87898	3.9197	0.0018552	-2.5482	-0.0012061	1.3715	0.00064913	473.2989191144262	97.032	0.14828	97.317	97.242	97.39	0.28442	0.039552	-6.9441E-05	NaN	0.62683	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14494000			13124	16131	6608	6637							0.18722009656244154
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.8323852419853	2	519.831517	1037.64848	3.3135	0.0017225	-2.2107	-0.0011492	1.1029	0.0005733	519.8300579479657	106.08	0.14129	106.24	106.16	106.3	0.15781					24	7	4	0	0	0	0.79362	1	45335	45335		3.5965	0	1	91696000	+		13125	10395	6609	6638	15801	15801					0.13116363550875576
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.8315917849541	2	519.831517	1037.64848	3.2813	0.0017057	-3.2184	-0.001673	0.062886	3.269E-05	519.8297251228339	106.05	0.14325	106.22	106.13	106.27	0.16174					20	7	4	0	0	0	0.71526	1	45257	45257		6.7232	0	1	68175000	+		13126	10395	6609	6638	15802	15802					0.13116363550875576
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	519.831517	1037.64848	1.4647	0.00076141	1.8445	0.00095881	3.3092	0.0017202	519.8321285626652	106.14	0.1203	106.14	106.07	106.19	0	-0.045141	0.0043933	NaN	6.7232	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10724000	+		13127	10395	6609	6638							0.13116363550875576
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	519.831517	1037.64848	2.9159	0.0015158	-1.9995	-0.0010394	0.91647	0.00047641	519.8295989949072	106.1	0.10065	106.16	106.1	106.21	0.054558	-0.029496	0.00039687	NaN	6.7232	11	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18218000	+		13128	10395	6609	6638							0.13116363550875576
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	519.831517	1037.64848	3.3135	0.0017225	-2.2107	-0.0011492	1.1029	0.0005733	519.8300579479657	106.08	0.14129	106.24	106.16	106.3	0.15781	0.048241	0.0001773	NaN	6.7232	24	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91696000	+		13129	10395	6609	6638							0.13116363550875576
KIETLKPIP	9	Unmodified	_KIETLKPIP_					0	0	0			REV__nc|ENSG00000151136|A6QL63-5|ABTB3	REV__nc|ENSG00000151136|A6QL63-5|ABTB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	519.831517	1037.64848	3.2813	0.0017057	-3.2184	-0.001673	0.062886	3.269E-05	519.8297251228339	106.05	0.14325	106.22	106.13	106.27	0.16174	0.026396	-0.00087043	NaN	6.7232	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68175000	+		13130	10395	6609	6638							0.13116363550875576
KIETRRGP	8	Unmodified	_KIETRRGP_					0	0	0			REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7870056033134	2	478.785433	955.556313	3.623	0.0017346	-0.12107	-5.7969E-05	3.5019	0.0016767	478.7851941445017	73.824	0.53294	75.142	74.841	75.374	1.318					38	16	3	0	0	0	0.8909	1	31011	31011		2.0598	0	1	4796300	+		13131	12663	6610	6639	15803	15803					0.07675698257230579
KIEVLVLLP	9	Unmodified	_KIEVLVLLP_					0	0	0		nc|ENSG00000113389|P17342-2|NPR3;ENSG00000113389|ENST00000265074|NPR3	nc|ENSG00000113389|P17342-2|NPR3	nc|ENSG00000113389|P17342-2|NPR3	MSMS	GG20161007_CRH_Patient100_W632_02	4	512.3442260622978	2	512.344261	1022.67397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.73	1	105.9	105.4	106.4	0.16679								0	0	0	0.42693	1	45046	45046		1.8442	0	1				13132	1821	6611	6640	15804	15804					0.16353838073314364
KIEYILVFI	9	Unmodified	_KIEYILVFI_					0	0	0			REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.3523437380791	2	569.349543	1136.68453	2.5927	0.0014762	2.9959	0.0017057	5.5886	0.0031819	569.3510701724067	95.914	0.1785	96.019	95.947	96.125	0.105					11	5	3	0	0	0	0.83753	1	40162	40162		1.8442	0	1	1473800	+		13133	15527	6612	6641	15805	15805					0.1216582072777328
KIEYILVFI	9	Unmodified	_KIEYILVFI_					0	0	0			REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	569.349543	1136.68453	1.3392	0.0007625	3.1794	0.0018102	4.5186	0.0025727	569.3510752006428	96.03	0.19972	96.03	95.92	96.12	0	0.0051792	0.00013675	NaN	1.8442	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1604600	+		13134	15527	6612	6641							0.1216582072777328
KIEYILVFI	9	Unmodified	_KIEYILVFI_					0	0	0			REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	REV__tr|A0A7D6VVA0|A0A7D6VVA0_9CLOTM50familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04490PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	569.349543	1136.68453	2.5927	0.0014762	2.9959	0.0017057	5.5886	0.0031819	569.3510701724067	95.914	0.1785	96.019	95.947	96.125	0.105	-0.0051792	-7.2182E-05	NaN	1.8442	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1473800	+		13135	15527	6612	6641							0.1216582072777328
KIFDEILVNA	10	Unmodified	_KIFDEILVNA_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2A|p.G202Qfs*16|1|0.35|ENSG00000131747|chr17:40412931-40412944|AGTTCCATCTCACC/-|frameshift_variant;TOP2A|p.E203Dfs*19|1|0.53|ENSG00000131747|chr17:40412941-40412942|CA/-|frameshift_variant;TOP2A|p.E205Lfs*38|1|0.09|ENSG00000131747|chr17:40412935-40412936|-/CATCTCACCAG|frameshift_variant;TOP2A|p.M204Nfs*34|1|0.15|ENSG00000131747|chr17:40412934-40412937|TCCA/-|frameshift_variant;TOP2A|p.E203Nfs*34|1|0.18|ENSG00000131747|chr17:40412936-40412942|CATCTCA/-|frameshift_variant;TOP2A|p.P208Rfs*18|1|0.03|ENSG00000131747|chr17:40412925-40412926|-/GCTTGAGTTC|frameshift_variant;ENSG00000077097|ENST00000264331|TOP2B;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant;TOP2A|p.R200Wfs*44|1|0.04|ENSG00000131747|chr17:40412950-40412951|-/TCCCATATTATCCA|frameshift_variant	TOP2A-STAU1|2|fusion;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	TOP2A-STAU1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3299438357353	2	581.329339	1160.64412	1.1672	0.00067852	-0.50165	-0.00029162	0.66554	0.0003869	581.3288832868191	57.158	0.2654	58.572	58.431	58.696	1.4145					15	8	2	0	0	0	0.070292	2	23949	23949;24001		70.332	24.632	1	2956700			13136	16031;16032	6613	6642	15806;15807	15806					0.07022854337333229
KIFDEILVNA	10	Unmodified	_KIFDEILVNA_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2A|p.G202Qfs*16|1|0.35|ENSG00000131747|chr17:40412931-40412944|AGTTCCATCTCACC/-|frameshift_variant;TOP2A|p.E203Dfs*19|1|0.53|ENSG00000131747|chr17:40412941-40412942|CA/-|frameshift_variant;TOP2A|p.E205Lfs*38|1|0.09|ENSG00000131747|chr17:40412935-40412936|-/CATCTCACCAG|frameshift_variant;TOP2A|p.M204Nfs*34|1|0.15|ENSG00000131747|chr17:40412934-40412937|TCCA/-|frameshift_variant;TOP2A|p.E203Nfs*34|1|0.18|ENSG00000131747|chr17:40412936-40412942|CATCTCA/-|frameshift_variant;TOP2A|p.P208Rfs*18|1|0.03|ENSG00000131747|chr17:40412925-40412926|-/GCTTGAGTTC|frameshift_variant;ENSG00000077097|ENST00000264331|TOP2B;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant;TOP2A|p.R200Wfs*44|1|0.04|ENSG00000131747|chr17:40412950-40412951|-/TCCCATATTATCCA|frameshift_variant	TOP2A-STAU1|2|fusion;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	TOP2A-STAU1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3293945193291	2	581.329339	1160.64412	0.85837	0.00049899	0.62314	0.00036225	1.4815	0.00086124	581.3296747557703	56.592	0.29857	58.56	58.394	58.693	1.9684					21	9	3	0	0	0	0.14781	1	23731	23731		55.503	17.327	1	3523700			13137	16031;16032	6613	6642	15808	15808					0.07022854337333229
KIFDEILVNA	10	Unmodified	_KIFDEILVNA_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2A|p.G202Qfs*16|1|0.35|ENSG00000131747|chr17:40412931-40412944|AGTTCCATCTCACC/-|frameshift_variant;TOP2A|p.E203Dfs*19|1|0.53|ENSG00000131747|chr17:40412941-40412942|CA/-|frameshift_variant;TOP2A|p.E205Lfs*38|1|0.09|ENSG00000131747|chr17:40412935-40412936|-/CATCTCACCAG|frameshift_variant;TOP2A|p.M204Nfs*34|1|0.15|ENSG00000131747|chr17:40412934-40412937|TCCA/-|frameshift_variant;TOP2A|p.E203Nfs*34|1|0.18|ENSG00000131747|chr17:40412936-40412942|CATCTCA/-|frameshift_variant;TOP2A|p.P208Rfs*18|1|0.03|ENSG00000131747|chr17:40412925-40412926|-/GCTTGAGTTC|frameshift_variant;ENSG00000077097|ENST00000264331|TOP2B;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant;TOP2A|p.R200Wfs*44|1|0.04|ENSG00000131747|chr17:40412950-40412951|-/TCCCATATTATCCA|frameshift_variant	TOP2A-STAU1|2|fusion;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	TOP2A-STAU1|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	581.329339	1160.64412	1.9839	0.0011533	1.9101	0.0011104	3.894	0.0022637	581.3310166496946	58.736	0.28674	58.736	58.623	58.91	0	0.11859	0.001522	NaN	70.332	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1369600			13138	16031;16032	6613	6642							0.07022854337333229
KIFDEILVNA	10	Unmodified	_KIFDEILVNA_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000131747|ENST00000423485|TOP2A;nc|ENSG00000077097|Q02880-2|TOP2B;TOP2A|p.G202Qfs*16|1|0.35|ENSG00000131747|chr17:40412931-40412944|AGTTCCATCTCACC/-|frameshift_variant;TOP2A|p.E203Dfs*19|1|0.53|ENSG00000131747|chr17:40412941-40412942|CA/-|frameshift_variant;TOP2A|p.E205Lfs*38|1|0.09|ENSG00000131747|chr17:40412935-40412936|-/CATCTCACCAG|frameshift_variant;TOP2A|p.M204Nfs*34|1|0.15|ENSG00000131747|chr17:40412934-40412937|TCCA/-|frameshift_variant;TOP2A|p.E203Nfs*34|1|0.18|ENSG00000131747|chr17:40412936-40412942|CATCTCA/-|frameshift_variant;TOP2A|p.P208Rfs*18|1|0.03|ENSG00000131747|chr17:40412925-40412926|-/GCTTGAGTTC|frameshift_variant;ENSG00000077097|ENST00000264331|TOP2B;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant;TOP2A|p.R200Wfs*44|1|0.04|ENSG00000131747|chr17:40412950-40412951|-/TCCCATATTATCCA|frameshift_variant	TOP2A-STAU1|2|fusion;TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	TOP2A-STAU1|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	581.329339	1160.64412	2.3292	0.0013541	1.1979	0.00069635	3.5271	0.0020504	581.3302067324571	58.28	0.31546	58.603	58.46	58.776	0.32299	-0.0151	0.0006939	NaN	70.332	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1065300			13139	16031;16032	6613	6642							0.07022854337333229
KIFEMGPVFTL	11	Oxidation (M)	_KIFEM(Oxidation (M))GPVFTL_		KIFEM(1)GPVFTL		KIFEM(41)GPVFTL	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	649.3475219607353	2	649.346674	1296.6788	2.0632	0.0013397	1.37	0.00088961	3.4332	0.0022293	649.3465746628838	65.597	0.35605	65.597	65.385	65.741	0					27	10	3	0	0	0	0.19131	1	27315	27315		40.725	9.4566	1	1741100			13140	5070	6614	6643	15809	15809		88			0.04232354153759843
KIFEMGPVFTL	11	Oxidation (M)	_KIFEM(Oxidation (M))GPVFTL_		KIFEM(1)GPVFTL		KIFEM(51)GPVFTL	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	649.3494140505791	2	649.346674	1296.6788	1.8334	0.0011905	0.74764	0.00048548	2.5811	0.001676	649.3474202157756	64.952	0.32285	65.279	65.162	65.485	0.32689					24	9	3	0	0	0	0.12391	1	27198	27198		51.488	18.702	1	1803400			13141	5070	6614	6643	15810	15810		88			0.04232354153759843
KIFEMGPVFTL	11	Oxidation (M)	_KIFEM(Oxidation (M))GPVFTL_		KIFEM(1)GPVFTL		KIFEM(76)GPVFTL	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.3487426638603	2	649.346674	1296.6788	1.8088	0.0011745	1.217	0.00079028	3.0258	0.0019648	649.3476477124755	63.751	0.56578	65.158	64.9	65.466	1.4071					48	17	4	0	0	0	0.034474	2	26711	26711;26758		75.571	19.394	1	5423400			13142	5070	6614	6643	15811;15812	15811		88			0.04232354153759843
KIFEMGPVFTL	11	Oxidation (M)	_KIFEM(Oxidation (M))GPVFTL_		KIFEM(1)GPVFTL		KIFEM(79)GPVFTL	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.3487426638603	2	649.346674	1296.6788	2.2983	0.0014924	1.2591	0.00081757	3.5574	0.00231	649.3472270175631	63.187	0.81388	65.131	64.628	65.441	1.9444					49	25	3	0	0	0	0.030532	2	26484	26484;26536		79.427	23.18	1	4492900			13143	5070	6614	6643	15813;15814	15813		88			0.04232354153759843
KIFEMGPVFTL	11	Unmodified	_KIFEMGPVFTL_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.3505737185478	2	641.349217	1280.68388	2.047	0.0013129	-3.9906	-0.0025594	-1.9436	-0.0012465	641.3488975444942	78.821	0.36546	78.821	78.629	78.995	0					29	11	4	0	0	0	0.35387	1	32866	32866		28.234	3.3521	1	4117300			13144	5070	6614	6644	15815	15815					0.054766580163914114
KIFEMGPVFTL	11	Unmodified	_KIFEMGPVFTL_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.3503906130791	2	641.349217	1280.68388	1.7074	0.001095	-3.0352	-0.0019466	-1.3278	-0.00085158	641.3496117915939	78.254	0.41533	78.563	78.323	78.738	0.30933					31	12	4	0	0	0	0.012482	2	32695	32695;32733		104.48	17.226	1	5254300			13145	5070	6614	6644	15816;15817	15816					0.054766580163914114
KIFEMGPVFTL	11	Unmodified	_KIFEMGPVFTL_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.3514892458916	2	641.349217	1280.68388	2.0913	0.0013413	-0.24052	-0.00015426	1.8508	0.001187	641.3498305217025	77.256	0.76454	78.537	78.281	79.045	1.2809					55	23	5	0	0	0	0.003916	3	32386	32386;32422;32461		132.13	64.054	1	24342000			13146	5070	6614	6644	15818;15819;15820	15818					0.054766580163914114
KIFEMGPVFTL	11	Unmodified	_KIFEMGPVFTL_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.3507568240166	2	641.349217	1280.68388	1.955	0.0012538	-0.76096	-0.00048804	1.194	0.0007658	641.3493859953809	76.736	0.77209	78.503	78.19	78.962	1.7672					76	23	5	0	0	0	0.003916	4	32200	32115;32160;32200;32243		132.13	69.562	1	20751000			13147	5070	6614	6644	15821;15822;15823;15824	15823					0.054766580163914114
KIFEWKNKF	9	Unmodified	_KIFEWKNKF_					0	0	0			REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	620.3500244021416	2	620.347866	1238.68118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.283	1	40.58	40.08	41.08	1.2961								0	0	0	0.42693	1	16479	16479		2.0598	1.6014	1		+		13148	15884	6615	6645	15825	15825					0.07138570673737377
KIFRRRRG	8	Unmodified	_KIFRRRRG_					0	0	0		ENST00000461349.5_1_9:132593183-132597524:-|nuORF;ENSG00000136819|ENST00000372447|C9orf78	ENST00000461349.5_1_9:132593183-132597524:-|nuORF	ENST00000461349.5_1_9:132593183-132597524:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8512451052666	2	544.849233	1087.68391	3.2406	0.0017656	0.579	0.00031547	3.8196	0.0020811	544.8499857283791	108.81	0.17838	108.97	108.83	109.01	0.1548					19	8	3	0	0	0	0.89051	1	47051	47051		2.3027	1.7012	1	10805000			13149	2739	6616	6646	15826	15826					0.14357883641923763
KIFRRRRG	8	Unmodified	_KIFRRRRG_					0	0	0		ENST00000461349.5_1_9:132593183-132597524:-|nuORF;ENSG00000136819|ENST00000372447|C9orf78	ENST00000461349.5_1_9:132593183-132597524:-|nuORF	ENST00000461349.5_1_9:132593183-132597524:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	544.849233	1087.68391	3.041	0.0016569	1.063	0.00057919	4.1041	0.0022361	544.8505167590814	108.81	0.17796	108.97	108.87	109.05	0.15898	0.0036545	0.00029362	NaN	2.3027	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13336000			13150	2739	6616	6646							0.14357883641923763
KIFSGVFVKV	10	Unmodified	_KIFSGVFVKV_					0	0	0		ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3479492068291	2	562.347335	1122.68012	2.5023	0.0014071	-0.64826	-0.00036455	1.854	0.0010426	562.346903045638	45.149	0.29055	46.514	46.337	46.628	1.3653					13	8	2	0	0	0	0.055952	1	18913	18913		91.085	61.244	1	1534300			13151	3140	6617	6647	15827	15827					0.12368356304864392
KIFSGVFVKV	10	Unmodified	_KIFSGVFVKV_					0	0	0		ENST00000530523.1_1_8:42580956-42581139:-|nuORF;nc|ENSG00000146223|Q6DKI1-2|RPL7L1;ENST00000462348.1_1_6:42848614-42854030:+|nuORF;ENST00000397415.7_1_6:42848808-42854199:+|nuORF;ENSG00000146223|ENST00000493763|RPL7L1	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	ENST00000530523.1_1_8:42580956-42581139:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3485595583916	2	562.347335	1122.68012	2.0731	0.0011658	0.012227	6.8756E-06	2.0853	0.0011727	562.3467181185456	44.58	0.28793	46.54	46.351	46.639	1.9596					13	8	2	0	0	0	0.38475	1	18673	18673		34.222	19.383	1	1044500			13152	3140	6617	6647	15828	15828					0.12368356304864392
KIFWKYYYGHY	11	Unmodified	_KIFWKYYYGHY_					0	0	0		nc|ENSG00000088836|Q8NBS3-4|SLC4A11;nc|ENSG00000088836|Q8NBS3-5|SLC4A11;ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11;nc|ENSG00000088836|Q8NBS3-2|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	784.8900024294853	2	784.390262	1566.76597	2.7316	0.0021427	-3.8332	-0.0030067	-1.1016	-0.00086407	784.8896365989531	87.102	0.68748	87.102	86.67	87.357	0					68	28	3	0	0	0	1.0393	1	36424	36424		0.35063	0.043601	1	11713000			13153	7835	6618	6648	15829	15829					0.005258964197082605
KIGDFGLVTSL	11	Unmodified	_KIGDFGLVTSL_					0	0	0		nc|ENSG00000055332|P19525-2|EIF2AK2;ENSG00000055332|ENST00000233057|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3328124880791	2	575.329339	1148.64412	2.4201	0.0013924	1.2831	0.00073823	3.7033	0.0021306	575.330292426378	64.34	0.31197	66.268	66.077	66.389	1.928					23	9	3	0	0	0	0.085421	1	27006	27006		59.052	9.1195	1	3042300			13154	721	6619	6649	15830	15830					0.0757485433734928
KIGDFGLVTSL	11	Unmodified	_KIGDFGLVTSL_					0	0	0		nc|ENSG00000055332|P19525-2|EIF2AK2;ENSG00000055332|ENST00000233057|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	575.329339	1148.64412	1.5808	0.0009095	0.44727	0.00025733	2.0281	0.0011668	575.3296391539602	66.581	0.25637	66.581	66.415	66.671	0	0.21055	-0.00045173	NaN	59.052	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	529050			13155	721	6619	6649							0.0757485433734928
KIGDFGLVTSL	11	Unmodified	_KIGDFGLVTSL_					0	0	0		nc|ENSG00000055332|P19525-2|EIF2AK2;ENSG00000055332|ENST00000233057|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	575.329339	1148.64412	3.0406	0.0017493	0.69927	0.00040231	3.7398	0.0021516	575.3298588818783	64.81	0.27734	66.217	66.079	66.356	1.4071	-0.15382	-0.00016177	NaN	59.052	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3194500			13156	721	6619	6649							0.0757485433734928
KIGNITTI	8	Unmodified	_KIGNITTI_					0	0	0			REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2658264040947	2	430.26601	858.517468	1.7812	0.00076641	-1.9264	-0.00082887	-0.14517	-6.2464E-05	430.2650640719285	70.851	0.62652	71.174	70.71	71.336	0.32359					42	19	3	0	0	0	0.88791	1	29654	29654		3.9444	0	1	4266300	+		13157	13129	6620	6650	15831	15831					0.08254972902830104
KIGNITTI	8	Unmodified	_KIGNITTI_					0	0	0			REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	430.26601	858.517468	1.7812	0.00076641	-1.9264	-0.00082887	-0.14517	-6.2464E-05	430.2650640719285	70.851	0.62652	71.174	70.71	71.336	0.32359	-0.021327	0.00019729	NaN	3.9444	42	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4266300	+		13158	13129	6620	6650							0.08254972902830104
KIGNITTI	8	Unmodified	_KIGNITTI_					0	0	0			REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	REV__ENST00000450418.1_1_3:4024502-4025426:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	430.26601	858.517468	2.6852	0.0011554	-2.7993	-0.0012044	-0.11407	-4.908E-05	430.26464888745676	69.859	0.59409	71.213	70.835	71.429	1.3536	0.017521	-0.00055383	NaN	3.9444	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2890900	+		13159	13129	6620	6650							0.08254972902830104
KIGSIIFQV	9	Unmodified	_KIGSIIFQV_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.8100463747978	2	502.810585	1003.60662	2.9309	0.0014737	-2.7173	-0.0013663	0.21364	0.00010742	502.8088573775447	59.09	0.28242	59.416	59.301	59.584	0.32554					35	20	2	0	0	0	0.060242	1	24754	24754		63.961	1.3878	1	4503700			13160	4271	6621	6651	15832	15832					0.10495807862389483
KIGSIIFQV	9	Unmodified	_KIGSIIFQV_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8118163943291	2	502.810585	1003.60662	0.62604	0.00031478	1.01	0.00050782	1.636	0.0008226	502.81076018670876	57.841	0.27383	59.259	59.101	59.375	1.4181					32	18	2	0	0	0	0.026734	1	24274	24274		92.653	3.7497	1	6538500			13161	4271	6621	6651	15833	15833					0.10495807862389483
KIGVKKLLKKI	11	Unmodified	_KIGVKKLLKKI_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.3106872439384	3	423.311114	1266.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.15	1	106.15	105.65	106.65	0								0	0	0	0.63775	1	45224	45224		0	0	1		+		13162	15564	6622	6652	15834	15834					0.2887340400652647
KIGVKKLLKKI	11	Unmodified	_KIGVKKLLKKI_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	423.3105651736259	3	423.311114	1266.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.11	1	106.16	105.66	106.66	0.05455								0	0	0	0.63775	1	45139	45139		0	0	1		+		13163	15564	6622	6652	15835	15835					0.2887340400652647
KIGVKKLLKKI	11	Unmodified	_KIGVKKLLKKI_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	423.3105041384697	3	423.311114	1266.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.03	1	106.19	105.69	106.69	0.15781								0	0	0	0.63775	1	45304	45304		0	0	1		+		13164	15564	6622	6652	15836	15836					0.2887340400652647
KIGVKKLLKKI	11	Unmodified	_KIGVKKLLKKI_					0	0	0			REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	REV__tr|A0A7D6VZ69|A0A7D6VZ69_9CLOTGlycosidehydrolasefamily99-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	423.3109924197197	3	423.311114	1266.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.14	1	106.3	105.8	106.8	0.15781								0	0	0	0.63775	1	45383	45383		0	0	1		+		13165	15564	6622	6652	15837	15837					0.2887340400652647
KIHLKRCVL	9	Unmodified	_KIHLKRCVL_					0	0	0		ENST00000403821.6_2_12:57735146-57735218:-|nuORF	ENST00000403821.6_2_12:57735146-57735218:-|nuORF	ENST00000403821.6_2_12:57735146-57735218:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3522827029228	2	555.352428	1108.6903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.91	1	108.06	107.56	108.56	0.15781								0	0	0	0.42693	1	46543	46543		2.0598	0	1				13166	6353	6623	6653	15838	15838					0.14030640758414847
KIHLLKSIFP	10	Unmodified	_KIHLLKSIFP_					0	0	0		ENST00000392381.7_1_3:196921390-196921444:-|nuORF	ENST00000392381.7_1_3:196921390-196921444:-|nuORF	ENST00000392381.7_1_3:196921390-196921444:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2533447146416	3	399.256898	1194.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.91	1	95.033	94.533	95.533	0.12331								0	0	0	0.66222	1	39717	39717		0.69767	0.07084	1				13167	6256	6624	6654	15839	15839					0.15928020604542326
KIHNRNVGVP	10	Unmodified	_KIHNRNVGVP_					0	0	0			REV__ACOT1|p.R281H|1|0.36|ENSG00000184227|chr14:73543231-73543231|G/A|missense_variant	REV__ACOT1|p.R281H|1|0.36|ENSG00000184227|chr14:73543231-73543231|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3309203982353	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.89803	1	31378	31378		1.6526	0.45928	1	6327800	+		13168	8077	6625	6655	15840	15840					0.08550747585650242
KIIDEDGLLNL	11	Unmodified	_KIIDEDGLLNL_					0	0	0		ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1	ENSG00000035928|ENST00000349703|RFC1	ENSG00000035928|ENST00000349703|RFC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	621.8522827029228	2	621.850635	1241.68672	1.8095	0.0011252	-0.07671	-4.7702E-05	1.7328	0.0010775	621.8510016272922	62.145	0.24939	62.475	62.385	62.635	0.32974					11	7	2	0	0	0	0.43089	1	26055	26055		26.021	2.0001	1	319060			13169	646	6626	6656	15841	15841					0.07554204674920584
KIIDEDGLLNL	11	Unmodified	_KIIDEDGLLNL_					0	0	0		ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1	ENSG00000035928|ENST00000349703|RFC1	ENSG00000035928|ENST00000349703|RFC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8536865115166	2	621.850635	1241.68672	2.8813	0.0017917	1.61	0.0010012	4.4913	0.0027929	621.8515329276165	60.975	0.25543	62.395	62.249	62.505	1.4196					16	7	3	0	0	0	0.30189	1	25555	25555		32.037	2.1969	1	983700			13170	646	6626	6656	15842	15842					0.07554204674920584
KIIDEDGLLNL	11	Unmodified	_KIIDEDGLLNL_					0	0	0		ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1	ENSG00000035928|ENST00000349703|RFC1	ENSG00000035928|ENST00000349703|RFC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8552123904228	2	621.850635	1241.68672	2.92	0.0018158	2.2344	0.0013894	5.1544	0.0032053	621.8525223636985	60.439	0.22243	62.404	62.292	62.514	1.9653					13	6	3	0	0	0	0.12391	1	25357	25357		51.488	1.9337	1	1397300			13171	646	6626	6656	15843	15843					0.07554204674920584
KIIDEDGLLNL	11	Unmodified	_KIIDEDGLLNL_					0	0	0		ENSG00000035928|ENST00000349703|RFC1;nc|ENSG00000035928|P35251|RFC1	ENSG00000035928|ENST00000349703|RFC1	ENSG00000035928|ENST00000349703|RFC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	621.850635	1241.68672	2.4393	0.0015169	-1.428	-0.000888	1.0113	0.00062889	621.8494831204875	62.622	0.24675	62.622	62.492	62.739	0	0.14766	-0.0032227	NaN	51.488	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188730			13172	646	6626	6656							0.07554204674920584
KIIDFIYTA	9	Unmodified	_KIIDFIYTA_					0	0	0		ENSG00000198642|ENST00000359039|KLHL9;KLHL13|p.A472Efs*12|1|0.04|ENSG00000003096|chrX:117901898-117901899|-/ATTAAAGTGAGACTTCTTCCTAAATT|frameshift_variant;nc|ENSG00000003096|Q9P2N7-2|KLHL13;ENSG00000003096|ENST00000540167|KLHL13;nc|ENSG00000003096|Q9P2N7-4|KLHL13;nc|ENSG00000003096|Q9P2N7|KLHL13;nc|ENSG00000003096|Q9P2N7-5|KLHL13	ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3105956912041	2	542.307875	1082.6012	2.4794	0.0013446	0.55787	0.00030254	3.0373	0.0016472	542.3083490021761	58.492	0.25148	58.815	58.683	58.934	0.32298					9	7	2	0	0	0	0.55689	1	24517	24517		13.042	1.4022	1	463660			13173	5064	6627	6657	15844	15844					0.06320084279923321
KIIETKRLYLR	11	Unmodified	_KIIETKRLYLR_					0	0	0		tr|A0A7D7A164|A0A7D7A164_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08525PE=4SV=1	tr|A0A7D7A164|A0A7D7A164_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08525PE=4SV=1	tr|A0A7D7A164|A0A7D7A164_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	358.9800903201103	4	358.980419	1431.89257	-0.593	-0.00021288	0.25605	9.1917E-05	-0.33695	-0.00012096	359.2310631644072	60.426	0.65568	60.426	60.174	60.829	0					45	20	4	0	0	0	1.0391	1	25221	25221		0.40827	0	1	1384100			13174	17232	6628	6658	15845	15845					0.1938982264484821
KIIFFKNVKYW	11	Unmodified	_KIIFFKNVKYW_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9604369997978	3	495.958741	1484.85439	1.913	0.00094878	1.2513	0.00062057	3.1643	0.0015694	495.9591137591809	90.637	1.2817	90.637	90	91.281	0					98	40	4	0	0	0	1.0395	1	37695	37695		0.08335	0	1	4164400			13175	7752	6629	6659	15846	15846					0.13135936730168396
KIIFFKNVKYW	11	Unmodified	_KIIFFKNVKYW_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9616882205009	3	495.958741	1484.85439	3.2463	0.00161	0.40037	0.00019857	3.6466	0.0018086	495.95896660715135	88.476	1.077	88.711	88.163	89.24	0.2347					52	33	3	0	0	0	1.0395	1	36950	36950		0.08335	0.08335	1	1013100			13176	7752	6629	6659	15847	15847					0.13135936730168396
KIIFFKNVKYW	11	Unmodified	_KIIFFKNVKYW_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9604064822197	3	495.958741	1484.85439	3.2753	0.0016244	-0.48011	-0.00023811	2.7952	0.0013863	495.9585910148389	90.552	1.9189	90.761	90.049	91.968	0.20904					125	59	3	0	0	0	1.0395	1	38076	38076		0.08335	0.010087	1	2352600			13177	7752	6629	6659	15848	15848					0.13135936730168396
KIIFFKNVKYW	11	Unmodified	_KIIFFKNVKYW_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9615356326103	3	495.958741	1484.85439	4.8226	0.0023918	0.71867	0.00035643	5.5413	0.0027483	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0395	1	37938	37938		0.45452	0.37117	1	3813600			13178	7752	6629	6659	15849	15849					0.13135936730168396
KIKEKFIYIKK	11	Unmodified	_KIKEKFIYIKK_					0	0	0			REV__tr|A0A7D6VM55|A0A7D6VM55_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13980PE=4SV=1	REV__tr|A0A7D6VM55|A0A7D6VM55_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13980PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	359.4746276736259	4	360.235253	1436.91191	2.2559	0.00081265	4.21	0.0015166	6.4659	0.0023292	360.4867084514739	73.293	0.81699	75.103	74.574	75.391	1.8101					33	25	2	0	0	0	0.14606	1	30531	30531		0.45452	0.35968	1	649660	+		13179	15312	6630	6660	15850	15850					0.21092778935735623
KIKKKHKPIS	10	Unmodified	_KIKKKHKPIS_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|185|3|sense	L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|185|3|sense	L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|185|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	603.3076660037041	2	603.905882	1205.79721	1.5696	0.00094787	2.6031	0.001572	4.1727	0.0025199	604.4097403036199	104.9	0.3697	104.9	104.66	105.03	0					37	19	2	0	0	0	0.1256	1	44245	44245		0	0	1	7470200			13180	7683	6631	6661	15851	15851					0.2025451424444782
KIKLHLIY	8	Unmodified	_KIKLHLIY_					0	0	0			REV__tr|A0A553STB1|A0A553STB1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04720PE=4SV=1	REV__tr|A0A553STB1|A0A553STB1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04720PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2255126833916	3	343.226939	1026.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.437	1	62.437	61.937	62.937	0								0	0	0	1.0178	1	26031	26031		0.45834	0	1		+		13181	15236	6632	6662	15852	15852					0.14672390995997375
KIKNPCKPV	9	Unmodified	_KIKNPCKPV_					0	0	0			REV__nc|ENSG00000171320|Q56NI9-2|ESCO2	REV__nc|ENSG00000171320|Q56NI9-2|ESCO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8751708865166	3	342.8758	1025.60557	-1.7076	-0.0005855	0.58088	0.00019917	-1.1267	-0.00038632	342.8758837311366	34.585	0.49891	34.585	34.37	34.869	0					50	15	4	0	0	0	0.82654	1	14506	14506		2.2828	0.19677	1	9353600	+		13182	11020	6633	6663	15853	15853					0.09379270221802471
KIKSRKAIKKK	11	Unmodified	_KIKSRKAIKKK_					0	0	0			REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4663574099541	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.1	1	105.27	104.77	105.77	0.16679								0	0	0	0.63775	1	44623	44623		0	0	1		+		13183	9820	6634	6664	15854	15854					0.2683413660693077
KIKSRKAIKKK	11	Unmodified	_KIKSRKAIKKK_					0	0	0			REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4700195193291	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.3	1	105.46	104.96	105.96	0.16679								0	0	0	0.63775	1	44753	44753		0	0	1		+		13184	9820	6634	6664	15855	15855					0.2683413660693077
KIKSRKAIKKK	11	Unmodified	_KIKSRKAIKKK_					0	0	0			REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4684326052666	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.42	1	105.59	105.09	106.09	0.16679								0	0	0	0.63775	1	44839	44839		0	0	1		+		13185	9820	6634	6664	15856	15856					0.2683413660693077
KIKSRKAIKKK	11	Unmodified	_KIKSRKAIKKK_					0	0	0			REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4677001833916	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.54	1	105.71	105.21	106.21	0.16679								0	0	0	0.63775	1	44918	44918		0	0	1		+		13186	9820	6634	6664	15857	15857					0.2683413660693077
KIKSRKAIKKK	11	Unmodified	_KIKSRKAIKKK_					0	0	0			REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	REV__RPL27|p.K133*|1|0.17|ENSG00000131469|chr17:43002904-43002905|-/AT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4725829958916	2	664.466638	1326.91872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.82	1	105.98	105.48	106.48	0.16679								0	0	0	0.63775	1	45103	45103		0	0	1		+		13187	9820	6634	6664	15858	15858					0.2683413660693077
KIKYPENFFLL	11	Unmodified	_KIKYPENFFLL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-3|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2712585330009	3	471.270984	1410.79112	2.8275	0.0013325	-0.069363	-3.2689E-05	2.7581	0.0012998	471.27070156353085	64.301	0.59905	66.229	65.888	66.487	1.928					38	18	3	0	0	0	0.93654	1	26932	26932		9.2438	7.7887	1	1521900			13188	5225;4242;4785	6635	6665	15859	15859					0.10215951222266995
KILDIGLAYI	10	Unmodified	_KILDIGLAYI_					0	0	0		nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41;ENSG00000006715|ENST00000310301|VPS41	nc|ENSG00000006715|P49754-2|VPS41	nc|ENSG00000006715|P49754-2|VPS41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8483764529228	2	559.844625	1117.6747	3.5512	0.0019881	1.3634	0.0007633	4.9146	0.0027514	559.8449650969833	73.414	0.37807	74.732	74.526	74.904	1.318					32	11	4	0	0	0	0.45795	1	30781	30781		29.841	0.759	1	4952300			13189	512	6636	6666	15860	15860					0.12056632722351424
KILDIGLAYI	10	Unmodified	_KILDIGLAYI_					0	0	0		nc|ENSG00000006715|P49754-2|VPS41;nc|ENSG00000006715|P49754-3|VPS41;ENSG00000006715|ENST00000310301|VPS41	nc|ENSG00000006715|P49754-2|VPS41	nc|ENSG00000006715|P49754-2|VPS41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8464233279228	2	559.844625	1117.6747	2.6192	0.0014664	1.4952	0.00083706	4.1144	0.0023034	559.8454875893034	72.874	0.41289	74.684	74.48	74.893	1.8101					28	12	3	0	0	0	0.22673	1	30591	30591		45.7	7.524	1	4299600			13190	512	6636	6666	15861	15861					0.12056632722351424
KILDLETQL	9	Unmodified	_KILDLETQL_					0	0	0		ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2;ENSG00000136811|ENST00000351030|ODF2	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.8199951052666	2	536.816064	1071.61758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.537	1	52.537	52.037	53.037	0								0	0	0	0.040242	1	21910	21910		65.474	13.844	1				13191	2737	6637	6667	15862	15862					0.08463165446005405
KILDLETQL	9	Unmodified	_KILDLETQL_					0	0	0		ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2;ENSG00000136811|ENST00000351030|ODF2	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.8184081912041	2	536.816064	1071.61758	1.7718	0.00095112	0.55899	0.00030008	2.3308	0.0012512	536.8155624477856	52.021	0.18188	52.347	52.191	52.373	0.32554					9	5	2	0	0	0	0.077188	1	21797	21797		57.249	15.409	1	1719200			13192	2737	6637	6667	15863	15863					0.08463165446005405
KILDLETQL	9	Unmodified	_KILDLETQL_					0	0	0		ENST00000488909.1_1_9:131260677-131262531:+|nuORF;nc|ENSG00000136811|Q5BJF6-2|ODF2;nc|ENSG00000136811|Q5BJF6-3|ODF2;nc|ENSG00000136811|Q5BJF6-4|ODF2;nc|ENSG00000136811|Q5BJF6|ODF2;ENSG00000136811|ENST00000351030|ODF2	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	ENST00000488909.1_1_9:131260677-131262531:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8191406130791	2	536.816064	1071.61758	1.5842	0.00085041	2.2171	0.0011902	3.8013	0.0020406	536.8169654873652	50.789	0.2098	52.183	52.016	52.226	1.3938					11	6	2	0	0	0	0.032536	2	21279	21232;21279		83.429	23.419	1	8049500			13193	2737	6637	6667	15864;15865	15865					0.08463165446005405
KILDYEVTL	9	Unmodified	_KILDYEVTL_					0	0	0		nc|ENSG00000134352|P40189-3|IL6ST;ENSG00000134352|ENST00000381298|IL6ST;ENST00000506241.1_1_5:55251841-55256299:-|nuORF;ENST00000503773.6_1_5:55236912-55256289:-|nuORF	nc|ENSG00000134352|P40189-3|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3121826052666	2	547.310615	1092.60668	1.9449	0.0010645	-0.19702	-0.00010783	1.7479	0.00095665	547.3107611291765	54.445	0.2054	54.766	54.667	54.872	0.32088					12	9	2	0	0	0	0.16939	1	22812	22812		36.506	7.4246	1	949630			13194	2612	6638	6668	15866	15866					0.0640776307170654
KILDYEVTL	9	Unmodified	_KILDYEVTL_					0	0	0		nc|ENSG00000134352|P40189-3|IL6ST;ENSG00000134352|ENST00000381298|IL6ST;ENST00000506241.1_1_5:55251841-55256299:-|nuORF;ENST00000503773.6_1_5:55236912-55256289:-|nuORF	nc|ENSG00000134352|P40189-3|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3117553591728	2	547.310615	1092.60668	0.61852	0.00033852	-0.9533	-0.00052175	-0.33478	-0.00018323	547.3098821943956	53.308	0.29353	54.709	54.57	54.863	1.4005					22	13	2	0	0	0	0.099302	1	22297	22297		49.554	9.6046	1	3656200			13195	2612	6638	6668	15867	15867					0.0640776307170654
KILDYEVTL	9	Unmodified	_KILDYEVTL_					0	0	0		nc|ENSG00000134352|P40189-3|IL6ST;ENSG00000134352|ENST00000381298|IL6ST;ENST00000506241.1_1_5:55251841-55256299:-|nuORF;ENST00000503773.6_1_5:55236912-55256289:-|nuORF	nc|ENSG00000134352|P40189-3|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3110839724541	2	547.310615	1092.60668	0.95242	0.00052127	-1.1589	-0.0006343	-0.20653	-0.00011303	547.3097683103813	52.77	0.26703	54.742	54.577	54.844	1.9722					19	11	2	0	0	0	0.053939	1	22102	22102		66.457	20.757	1	5536300			13196	2612	6638	6668	15868	15868					0.0640776307170654
KILLKLIQP	9	Unmodified	_KILLKLIQP_					0	0	0			REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.1599914431572	3	355.917994	1064.73215	-1.7884	-0.00063651	-4.3977	-0.0015652	-6.1861	-0.0022017	355.91653799887473	23.972	0.40096	23.972	23.81	24.211	0					13	12	2	0	0	0	0.11938	1	9966	9966		0.26902	0	1	172140	+		13197	8071	6639	6669	15869	15869					0.20237519718602925
KILLKLIQP	9	Unmodified	_KILLKLIQP_					0	0	0			REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	355.917994	1064.73215	0.47458	0.00016891	-6.5915	-0.002346	-6.1169	-0.0021771	356.24985805535414	23.5	0.62098	23.733	23.506	24.127	0.23306	0.076539	6.9361E-08	NaN	0.26902	44	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818790	+		13198	8071	6639	6669							0.20237519718602925
KILLKLIQP	9	Unmodified	_KILLKLIQP_					0	0	0			REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	REV__ENST00000574224.1_1_16:16108407-16150188:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	355.917994	1064.73215	-0.11035	-3.9276E-05	-6.5909	-0.0023458	-6.7013	-0.0023851	355.9155089291835	22.303	0.59082	23.48	23.231	23.821	1.177	-0.17599	7.0613E-07	NaN	0.26902	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1221400	+		13199	8071	6639	6669							0.20237519718602925
KILLLVLYL	9	Unmodified	_KILLLVLYL_					0	0	0			REV__ENST00000539764.1_3_11:73689441-73691800:-|nuORF	REV__ENST00000539764.1_3_11:73689441-73691800:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539855837822	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.827	1	89.827	89.327	90.327	0								0	0	0	0.42693	1	37546	37546		0.26902	0	1		+		13200	13776	6640	6670	15870	15870					0.2017528800411128
KILPTLEAV	9	Unmodified	_KILPTLEAV_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.3112060427666	2	492.310418	982.606283	1.7748	0.00087375	-0.30693	-0.0001511	1.4679	0.00072265	492.31043974801094	48.577	0.4693	48.577	48.373	48.842	0					26	14	3	0	0	0	0.04812	2	20300	20254;20300		69.105	27.01	1	2352500			13201	3042	6641	6671	15871;15872	15872					0.11428388142519452
KILPTLEAV	9	Unmodified	_KILPTLEAV_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3112670779228	2	492.310418	982.606283	2.4205	0.0011916	0.36623	0.0001803	2.7867	0.0013719	492.310646128973	48.023	0.36037	48.354	48.196	48.556	0.33034					24	11	3	0	0	0	0.04812	3	20152	20116;20152;20198		69.105	27.265	1	2348000			13202	3042	6641	6671	15873;15874;15875	15874					0.11428388142519452
KILPTLEAV	9	Unmodified	_KILPTLEAV_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3113891482353	2	492.310418	982.606283	1.7877	0.00088011	0.14695	7.2343E-05	1.9347	0.00095245	492.310594854353	46.503	0.46569	47.878	47.617	48.083	1.3751					37	14	3	0	0	0	0.0033884	3	19510	19423;19468;19510		126.57	65.208	1	9786700			13203	3042	6641	6671	15876;15877;15878	15878					0.11428388142519452
KILPTLEAV	9	Unmodified	_KILPTLEAV_					0	0	0		ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3112670779228	2	492.310418	982.606283	1.3929	0.00068576	0.079323	3.9051E-05	1.4723	0.00072481	492.3106103485193	46.049	0.42931	48.019	47.789	48.219	1.9703					34	13	3	0	0	0	0.0058174	3	19296	19246;19296;19352		118.89	50.814	1	9429700			13204	3042	6641	6671	15879;15880;15881	15880					0.11428388142519452
KILSELFTV	9	Unmodified	_KILSELFTV_					0	0	0		ENST00000549159.1_1_14:31081376-31085737:+|nuORF;ENSG00000092140|ENST00000206595|G2E3	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3170654177666	2	525.3157	1048.61685	2.0443	0.0010739	-0.51375	-0.00026988	1.5306	0.00080402	525.3149800805675	64.747	0.60612	64.747	64.56	65.166	0					39	18	3	0	0	0	0.063746	1	26960	26960		62.573	10.304	1	3369800			13205	1160	6642	6672	15882	15882					0.09448370796940253
KILSELFTV	9	Unmodified	_KILSELFTV_					0	0	0		ENST00000549159.1_1_14:31081376-31085737:+|nuORF;ENSG00000092140|ENST00000206595|G2E3	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3175536990166	2	525.3157	1048.61685	2.083	0.0010942	0.41198	0.00021642	2.495	0.0013106	525.3155303499157	64.184	0.61283	64.513	64.305	64.918	0.32899					36	18	3	0	0	0	0.04812	1	26907	26907		69.105	19.172	1	3557700			13206	1160	6642	6672	15883	15883					0.09448370796940253
KILSELFTV	9	Unmodified	_KILSELFTV_					0	0	0		ENST00000549159.1_1_14:31081376-31085737:+|nuORF;ENSG00000092140|ENST00000206595|G2E3	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3171264529228	2	525.3157	1048.61685	2.9997	0.0015758	-2.5536	-0.0013414	0.44614	0.00023437	525.3141907778775	62.896	0.86096	64.31	64.075	64.936	1.4134					76	27	4	0	0	0	0.007852	2	26377	26330;26377		111.29	6.4879	1	23478000			13207	1160	6642	6672	15884;15885	15885					0.09448370796940253
KILSELFTV	9	Unmodified	_KILSELFTV_					0	0	0		ENST00000549159.1_1_14:31081376-31085737:+|nuORF;ENSG00000092140|ENST00000206595|G2E3	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	ENST00000549159.1_1_14:31081376-31085737:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3165161013603	2	525.3157	1048.61685	3.1046	0.0016309	-2.8901	-0.0015182	0.21456	0.00011271	525.3140965603634	62.355	0.48352	64.312	64.03	64.514	1.9571					30	15	2	0	0	0	0.033102	1	26105	26105		82.529	14.449	1	24901000			13208	1160	6642	6672	15886	15886					0.09448370796940253
KILVKLKMQL	10	Unmodified	_KILVKLKMQL_					0	0	0		PLCB2|p.R697Tfs*25|1|0.05|ENSG00000137841|chr15:40293698-40293699|-/C|frameshift_variant;PLCB2|p.R766Pfs*8|1|0.09|ENSG00000137841|chr15:40292955-40292955|C/-|frameshift_variant;ENST00000558588.5_1_15:40583969-40599873:-|nuORF;PLCB2|p.R1022Nfs*56|1|0.09|ENSG00000137841|chr15:40290811-40290812|-/ATTT|frameshift_variant;PLCB2|p.A1021Efs*60|1|0.07|ENSG00000137841|chr15:40290812-40290813|-/TAGAGGCCCCTTT|frameshift_variant;nc|ENSG00000137841|Q00722-3|PLCB2;nc|ENSG00000137841|Q00722-2|PLCB2;ENSG00000137841|ENST00000260402|PLCB2	PLCB2|p.R697Tfs*25|1|0.05|ENSG00000137841|chr15:40293698-40293699|-/C|frameshift_variant	PLCB2|p.R697Tfs*25|1|0.05|ENSG00000137841|chr15:40293698-40293699|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2760192751884	3	405.273672	1212.79919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.83	1	112.87	112.37	113.37	0.044189								0	0	0	0.66222	1	48613	48613		0.69767	0.42865	1				13209	2794	6643	6673	15887	15887					0.20129806938052752
KILWLNQEP	9	Unmodified	_KILWLNQEP_					0	0	0		ENSG00000112584|ENST00000476287|FAM120B;nc|ENSG00000112584|Q96EK7-2|FAM120B;nc|ENSG00000112584|Q96EK7-3|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.8867980837822	3	380.885241	1139.63389	1.6291	0.00062049	2.0513	0.00078129	3.6803	0.0014018	380.88601018686467	52.064	0.94672	52.389	52.006	52.953	0.32554					99	30	4	0	0	0	0.76103	1	21983	21983		4.897	0.18109	1	14753000			13210	1789	6644	6674	15888	15888					0.06966291402750358
KIMDYSLLL	9	Unmodified	_KIMDYSLLL_					0	0	0		nc|ENSG00000166908|Q8TBX8-2|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C;ENSG00000166908|ENST00000354947|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3104736208916	2	548.309561	1094.60457	2.1787	0.0011946	0.79343	0.00043504	2.9721	0.0016296	548.3095972231085	65.717	0.39926	67.116	66.91	67.31	1.3989					28	12	3	0	0	0	0.04812	1	27561	27561		69.105	5.5421	1	14989000			13211	3933	6645	6675	15889	15889					0.06105011062254562
KINLTATSSL	10	Unmodified	_KINLTATSSL_					0	0	0			REV__nc|ENSG00000174442|Q9H900-2|ZWILCH	REV__nc|ENSG00000174442|Q9H900-2|ZWILCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8069946169853	2	524.305864	1046.59717	0.74674	0.00039152	2.5544	0.0013393	3.3012	0.0017308	524.3079745741111	58.222	0.74462	59.64	59.29	60.035	1.4181					82	29	4	0	0	0	0.40874	1	24310	24310		32.786	0.4802	1	46978000	+		13212	11122	6646	6676	15890	15890					0.07573994786184812
KINNFSSDSNI	11	Unmodified	_KINNFSSDSNI_					0	0	0		tr|A0A553SNF8|A0A553SNF8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24305PE=4SV=1	tr|A0A553SNF8|A0A553SNF8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24305PE=4SV=1	tr|A0A553SNF8|A0A553SNF8_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.8760864138603	3	413.53857	1237.59388	-0.69543	-0.00028759	3.024	0.0012506	2.3286	0.00096296	413.53941360183325	11.741	0.98571	11.741	11.048	12.034	0					83	31	4	0	0	0	0.87205	1	4720	4720		6.2344	1.8282	1	13392000			13213	16418	6647	6677	15891	15891					-0.01541300058465822
KINQEFGEKE	10	Unmodified	_KINQEFGEKE_					0	0	0		nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	nc|ENSG00000152582|Q9C093-4|SPEF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	408.5443603396416	3	407.875182	1220.60372	-0.76285	-0.00031115	-2.7107	-0.0011056	-3.4735	-0.0014168	408.20853262158914	13.841	0.21647	13.841	13.702	13.919	0					10	6	2	0	0	0	0.12463	1	5726	5726		12.175	0	1	129440			13214	7898	6648	6678	15892	15892					0.0022388794689049973
KINQSEWRY	9	Unmodified	_KINQSEWRY_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;CACNA1D-DNAH1|1|fusion;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	612.3125488162041	2	612.312012	1222.60947	0.86987	0.00053263	-0.84201	-0.00051558	0.027856	1.7057E-05	612.3120170837766	13.617	0.43186	13.617	13.487	13.919	0					27	13	3	0	0	0	0.091139	1	5630	5630		52.268	2.3353	1	2029800			13215	1884	6649	6679	15893	15893					0.0070703124922602
KINQSEWRY	9	Unmodified	_KINQSEWRY_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;CACNA1D-DNAH1|1|fusion;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5442382693291	3	408.543767	1222.60947	0.3977	0.00016248	0.59806	0.00024433	0.99576	0.00040681	408.54407096939843	13.384	0.59533	13.483	13.185	13.78	0.09944					62	18	5	0	0	0	0.23535	1	5543	5543		21.59	2.8689	1	12986000			13216	1884	6649	6679	15894	15894					0.0070703124922602
KINQSEWRY	9	Unmodified	_KINQSEWRY_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;CACNA1D-DNAH1|1|fusion;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5439941287041	3	408.543767	1222.60947	-0.41577	-0.00016986	1.1297	0.00046155	0.71397	0.00029169	408.54427750083966	12.999	0.56661	13.725	13.473	14.04	0.72639					54	17	4	0	0	0	0.17276	1	5433	5433		27.223	4.2076	1	8421300			13217	1884	6649	6679	15895	15895					0.0070703124922602
KINQSEWRY	9	Unmodified	_KINQSEWRY_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;CACNA1D-DNAH1|1|fusion;ENST00000488988.5_1_3:52422617-52433783:+|nuORF;ENST00000486752.5_1_3:52422617-52434459:+|nuORF	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	612.312012	1222.60947	0.12459	7.6289E-05	0.12753	7.8089E-05	0.25212	0.00015438	612.3119062302795	13.401	0.18468	13.501	13.406	13.591	0.099441	-0.05831	0.00080222	NaN	52.268	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	495700			13218	1884	6649	6679							0.0070703124922602
KIPVIAHQL	9	Unmodified	_KIPVIAHQL_					0	0	0			REV__tr|A0A553SGF4|A0A553SGF4_NIACIGlycineoxidaseThiOOS=NialliacirculansOX=1397GN=thiOPE=4SV=1	REV__tr|A0A553SGF4|A0A553SGF4_NIACIGlycineoxidaseThiOOS=NialliacirculansOX=1397GN=thiOPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8247558474541	2	509.824027	1017.6335	4.4789	0.0022834	-2.7157	-0.0013845	1.7632	0.00089891	509.8225687406837	90.869	0.44899	91.851	91.59	92.039	0.98156					25	13	3	0	0	0	0.83213	1	38226	38226		2.0598	0	1	1262300	+		13219	14744	6650	6680	15896	15896					0.12538916473545214
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9886352419853	4	362.986612	1447.91734	-1.1592	-0.00042077	2.663	0.00096665	1.5039	0.00054588	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.039	2	14090	14090;14129		0.45452	0	1	399160000			13220	6063	6651	6681	15897;15898	15897					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9860412478447	4	362.986612	1447.91734	-1.0768	-0.00039088	0.30737	0.00011157	-0.76948	-0.00027931	362.9867618023066	36.01	0.74994	36.01	35.462	36.212	0					283	63	5	0	0	0	1.0402	2	14885	14885;14963		0.08335	0.08335	1	455320000			13221	6063	6651	6681	15899;15900	15899					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9883911013603	4	362.986612	1447.91734	1.0375	0.00037658	0.40268	0.00014617	1.4401	0.00052275	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.039	1	13640	13640		0.45452	0	1	559590000			13222	6063	6651	6681	15901	15901					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9861022830009	4	362.986612	1447.91734	-0.64115	-0.00023273	-0.75471	-0.00027395	-1.3959	-0.00050668	362.9863334002999	33.389	0.45662	34.664	34.38	34.837	1.2752					155	34	5	0	0	0	1.0402	3	13983	13983;14023;14064		0.08335	0.08335	1	1002299999.9999999			13223	6063	6651	6681	15902;15903;15904	15902					0.2113017924655196
KIRCLLKKKYR	11	Unmodified	_KIRCLLKKKYR_					0	0	0		ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9872009158134	4	362.986612	1447.91734	0.47661	0.000173	0.2743	9.9566E-05	0.75091	0.00027257	362.9877963273164	30.842	1.2035	32.657	32.231	33.435	1.8151					129	40	6	0	0	0	1.0402	1	12862	12862		0.094841	0	1	538960000			13224	6063	6651	6681	15905	15905					0.2113017924655196
KIRGDSTLLIS	11	Unmodified	_KIRGDSTLLIS_					0	0	0			REV__ENSG00000101349|ENST00000353224|PAK5	REV__ENSG00000101349|ENST00000353224|PAK5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.8582031130791	2	601.858795	1201.70304	2.5963	0.0015626	-0.89448	-0.00053835	1.7018	0.0010242	601.8582541012362	90.482	0.39563	90.482	90.256	90.651	0					31	12	3	0	0	0	1.0174	1	37776	37776		2.7352	0.23671	1	3217500	+		13225	9032	6652	6682	15906	15906					0.11025330631673569
KIRIILLYIFL	11	Unmodified	_KIRIILLYIFL_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9681884646416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.358	1	17.358	16.858	17.858	0								0	0	0	0.63775	1	7205	7205		0	0	1				13226	2743	6653	6683	15907	15907					0.24102270803768988
KIRIILLYIFL	11	Unmodified	_KIRIILLYIFL_					0	0	0		ENSG00000136854|ENST00000373299|STXBP1;nc|ENSG00000136854|P61764-2|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9706298708916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.6	1	17.6	17.1	18.1	0								0	0	0	0.63775	1	7307	7307		0	0	1				13227	2743	6653	6683	15908	15908					0.24102270803768988
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	737.9863159060478	2	737.483686	1472.95282	2.718	0.0020045	-0.51036	-0.00037638	2.2077	0.0016281	737.4832387487512	105.79	0.11952	105.85	105.78	105.9	0.05455					15	5	4	0	0	0	1.0405	1	44938	44938		0	0	1	28817000			13228	790	6654	6684	15909	15909					0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	737.4850952029228	2	737.483686	1472.95282	2.4917	0.0018376	-0.64182	-0.00047333	1.8498	0.0013642	737.4831543543606	105.79	0.14621	105.95	105.85	106	0.15859					27	7	4	0	0	0	1.0405	1	45123	45123		0	0	1	186630000			13229	790	6654	6684	15910	15910					0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.9926330447197	3	491.991549	1472.95282	3.1828	0.0015659	-1.2111	-0.00059583	1.9718	0.00097009	491.9911141187515	105.77	0.12697	105.93	105.87	106	0.15859					11	6	2	0	0	0	1.0405	1	45140	45140		0	0	1	44118000			13230	790	6654	6684	15911	15911					0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	737.4847289919853	2	737.483686	1472.95282	2.6752	0.0019729	-1.7923	-0.0013218	0.88289	0.00065112	737.4823240170447	105.77	0.15118	105.93	105.85	106	0.16679					25	7	4	0	0	0	1.0405	1	45048	45048		0	0	1	139640000			13231	790	6654	6684	15912	15912					0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.9919006228447	3	491.991549	1472.95282	3.3814	0.0016636	-1.0592	-0.00052114	2.3221	0.0011425	491.99046579458786	105.78	0.12936	105.94	105.85	105.97	0.16679					19	6	4	0	0	0	1.0405	1	45088	45088		0	0	1	38401000			13232	790	6654	6684	15913	15913					0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	491.991549	1472.95282	0.99673	0.00049038	0.64862	0.00031912	1.6454	0.0008095	491.99161364338084	105.85	0.081772	105.85	105.79	105.88	0	-0.046879	0.0025591	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6052500			13233	790	6654	6684							0.2352597781853092
KIRKRYLKRRG	11	Unmodified	_KIRKRYLKRRG_					0	0	0		ENSG00000065600|ENST00000261455|PACC1;nc|ENSG00000065600|Q9H813-2|PACC1	ENSG00000065600|ENST00000261455|PACC1	ENSG00000065600|ENST00000261455|PACC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	491.991549	1472.95282	3.4328	0.0016889	-2.0006	-0.00098428	1.4322	0.00070462	492.324267794962	105.79	0.081818	105.85	105.8	105.88	0.05455	-0.044552	-0.0013511	NaN	0	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7178100			13234	790	6654	6684							0.2352597781853092
KIRLLGVHKKV	11	Unmodified	_KIRLLGVHKKV_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.4722778201103	4	323.473766	1289.86596	-2.6752	-0.00086535	-2.3949	-0.00077469	-5.0701	-0.00164	323.47299043898664	27.873	0.666	27.873	27.714	28.38	0					63	21	4	0	0	0	1.0402	1	11644	11644		0.094841	0.011491	1	62473000	+		13235	8555	6655	6685	15914	15914					0.23262178544155176
KIRLLGVHKKV	11	Unmodified	_KIRLLGVHKKV_					0	0	0			REV__nc|ENSG00000020922|P49959-2|MRE11	REV__nc|ENSG00000020922|P49959-2|MRE11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	323.473766	1289.86596	-2.6752	-0.00086535	-2.3949	-0.00077469	-5.0701	-0.00164	323.47299043898664	27.873	0.666	27.873	27.714	28.38	0	0	0	NaN	0.094841	63	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62473000	+		13236	8555	6655	6685							0.23262178544155176
KIRRNVKMK	9	Unmodified	_KIRRNVKMK_					0	0	0		ENST00000376511.6_1_6:30574352-30574561:-|nuORF	ENST00000376511.6_1_6:30574352-30574561:-|nuORF	ENST00000376511.6_1_6:30574352-30574561:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2850219607353	3	391.585132	1171.73357	-0.083446	-3.2676E-05	-2.0344	-0.00079665	-2.1179	-0.00082932	391.5841651221622	40.35	0.25389	40.35	40.266	40.52	0					10	7	2	0	0	0	0.11944	1	16918	16918		0.96228	0.26461	1	262060			13237	6190	6656	6686	15915	15915					0.15456830535686095
KIRYILLALLF	11	Unmodified	_KIRYILLALLF_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4770690798759	4	341.477246	1361.87988	0.44327	0.00015136	-0.36468	-0.00012453	0.078588	2.6836E-05	341.47698019483954	26.14	1.2117	26.401	25.837	27.049	0.26173					152	39	5	0	0	0	1.0402	2	10937	10937;10992		0.094841	0	1	25697000			13238	16369	6657	6687	15916;15917	15916					0.21341411252569742
KIRYILLALLF	11	Unmodified	_KIRYILLALLF_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4773437380791	4	341.477246	1361.87988	0.56529	0.00019304	0.87601	0.00029914	1.4413	0.00049217	341.4774933030518	28.288	1.3083	28.559	28.243	29.551	0.27119					128	42	4	0	0	0	1.0402	1	11866	11866		0.094841	0	1	8660700			13239	16369	6657	6687	15918	15918					0.21341411252569742
KIRYILLALLF	11	Unmodified	_KIRYILLALLF_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.4768859744072	4	341.477246	1361.87988	0.12265	4.1881E-05	-0.066541	-2.2722E-05	0.056107	1.9159E-05	341.4771281856021	24.829	1.2974	26.07	25.547	26.845	1.241					158	42	6	0	0	0	1.0402	3	10370	10370;10478;10676		0.094841	0	1	32549000			13240	16369	6657	6687	15919;15920;15921	15919					0.21341411252569742
KIRYILLALLF	11	Unmodified	_KIRYILLALLF_					0	0	0		tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	tr|A0A553SM61|A0A553SM61_NIACICalcineurin-likephosphoesterasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21835PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4767639040947	4	341.477246	1361.87988	0.1021	3.4866E-05	-0.58823	-0.00020087	-0.48613	-0.000166	341.47695092934583	24.582	1.4887	26.266	25.568	27.057	1.6845					182	49	5	0	0	0	1.0402	2	10231	10231;10279		0.094841	0	1	37959000			13241	16369	6657	6687	15922;15923	15922					0.21341411252569742
KISVIVETV	9	Unmodified	_KISVIVETV_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3089477419853	2	494.307875	986.601197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.919	1	41.236	40.736	41.736	0.31683								0	0	0	0.35665	1	17197	17197		13.042	0.51092	1				13242	3731	6658	6688	15924	15924					0.10736084279903935
KISVIVETV	9	Unmodified	_KISVIVETV_					0	0	0		ENSG00000163902|ENST00000296255|RPN1;RPN1|p.R263Tfs*3|1|0.4|ENSG00000163902|chr3:128632004-128632005|-/T|frameshift_variant	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3103515505791	2	494.307875	986.601197	1.351	0.00066782	0.2871	0.00014192	1.6381	0.00080974	494.30865497124864	38.841	0.29131	40.678	40.525	40.817	1.8366					17	8	3	0	0	0	0.16939	1	16252	16252		36.506	2.1045	1	1318600			13243	3731	6658	6688	15925	15925					0.10736084279903935
KITPLEIEVL	10	Unmodified	_KITPLEIEVL_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8574096560478	2	577.855189	1153.69583	3.0207	0.0017455	0.3614	0.00020884	3.3821	0.0019544	577.854960750171	64.714	0.33987	66.121	65.923	66.263	1.4071					25	10	3	0	0	0	0.53402	1	27162	27162		26.021	3.2844	1	3855200			13244	2750	6659	6689	15926	15926					0.12512598031230482
KITPLEIEVL	10	Unmodified	_KITPLEIEVL_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8563110232353	2	577.855189	1153.69583	2.6215	0.0015149	0.45633	0.00026369	3.0778	0.0017786	577.8551688533295	64.116	0.3756	66.044	65.857	66.233	1.928					27	11	3	0	0	0	0.55892	1	26938	26938		24.882	4.467	1	2847500			13245	2750	6659	6689	15927	15927					0.12512598031230482
KIVCKPSI	8	Unmodified	_KIVCKPSI_					0	0	0			REV__ENSG00000197608|ENST00000594440|ZNF841;REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	444.2741271853447	2	444.272781	886.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.3	1	105.46	104.96	105.96	0.15859								0	0	0	1.0178	1	44818	44818		4.756	0	1		+		13246	11683;11793	6660	6690	15928	15928					0.08320507410439859
KIWDVSVNSV	10	Unmodified	_KIWDVSVNSV_					0	0	0		ENSG00000071127|ENST00000499869|WDR1;SKAP1-WDR1|2|fusion;ENST00000515743.5_1_4:10078742-10093271:-|nuORF;ENST00000502962.5_1_4:10077004-10094774:-|nuORF;nc|ENSG00000071127|O75083-3|WDR1;SKAP1-WDR1|1|fusion;ENST00000506246.5_1_4:10086058-10094494:-|nuORF;ENST00000504739.5_1_4:10086058-10094651:-|nuORF	ENSG00000071127|ENST00000499869|WDR1	ENSG00000071127|ENST00000499869|WDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8159057497978	2	573.811313	1145.60807	1.6109	0.00092436	2.1026	0.0012065	3.7136	0.0021309	573.8134752478509	45.373	0.28565	47.332	47.207	47.493	1.9596					17	8	3	0	0	0	0.6796	1	19014	19014		19.362	6.3195	1	812960			13247	865	6661	6691	15929	15929					0.041093971604595936
KKALLGLLILV	11	Unmodified	_KKALLGLLILV_					0	0	0			REV__tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	REV__tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2870666384697	3	394.284565	1179.83187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.511	1	98.592	98.092	99.092	0.080376								0	0	0	0.63775	1	41228	41228		0.08335	0.08335	1		+		13248	14901	6662	6692	15930	15930					0.2491433733255235
KKARKRTKK	9	Unmodified	_KKARKRTKK_					0	0	0		ENST00000297994.3_1_9:37762104-37768080:+|nuORF;ENST00000537911.5_1_9:37762107-37769963:+|nuORF;ENST00000488673.6_1_9:37762104-37763860:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1143.790209949017	1	1143.77967	1142.77239	3.928	0.0044928	4.1652	0.0047641	8.0933	0.0092569	1143.7866670468113	104.24	0.066833	104.3	104.25	104.32	0.059502					23	8	3	0	0	0	0.85068	1	43905	43905		0.45834	0.10771	1	132190000			13249	5738	6663	6693	15931	15931					0.2067187916175044
KKARKRTKK	9	Unmodified	_KKARKRTKK_					0	0	0		ENST00000297994.3_1_9:37762104-37768080:+|nuORF;ENST00000537911.5_1_9:37762107-37769963:+|nuORF;ENST00000488673.6_1_9:37762104-37763860:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1143.787768542767	1	1143.77967	1142.77239	3.0085	0.0034411	4.337	0.0049606	7.3456	0.0084017	1143.7863647121585	104.15	0.081268	104.32	104.27	104.35	0.1731					19	7	3	0	0	0	0.85068	1	43991	43991		0.45834	0.10771	1	150140000			13250	5738	6663	6693	15932	15932					0.2067187916175044
KKARKRTKK	9	Unmodified	_KKARKRTKK_					0	0	0		ENST00000297994.3_1_9:37762104-37768080:+|nuORF;ENST00000537911.5_1_9:37762107-37769963:+|nuORF;ENST00000488673.6_1_9:37762104-37763860:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1143.77967	1142.77239	1.353	0.0015476	6.4502	0.0073776	7.8032	0.0089252	1144.7863937702475	104.28	0.063629	104.28	104.23	104.29	0	-0.037746	0.0018209	NaN	0.45834	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29326000			13251	5738	6663	6693							0.2067187916175044
KKARKRTKK	9	Unmodified	_KKARKRTKK_					0	0	0		ENST00000297994.3_1_9:37762104-37768080:+|nuORF;ENST00000537911.5_1_9:37762107-37769963:+|nuORF;ENST00000488673.6_1_9:37762104-37763860:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	ENST00000297994.3_1_9:37762104-37768080:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1143.77967	1142.77239	2.7741	0.0031729	5.0094	0.0057296	7.7835	0.0089026	1143.7875084938894	104.19	0.080505	104.35	104.3	104.38	0.16055	0.038615	0.00017291	NaN	0.45834	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158090000			13252	5738	6663	6693							0.2067187916175044
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.9813720583916	4	341.98229	1363.90005	-2.176	-0.00074415	0.52206	0.00017853	-1.6539	-0.00056561	341.9827029259763	24.535	0.64689	24.535	24.026	24.673	0					55	20	4	0	0	0	1.0405	1	10230	10230		0	0	1	2257000			13253	7895	6664	6694	15933	15933					0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	341.1807433962822	4	341.98229	1363.90005	0.29504	0.0001009	-1.5949	-0.00054544	-1.2999	-0.00044454	342.2324923569699	23.179	0.56369	23.412	23.25	23.814	0.23306					35	17	3	0	0	0	0.14606	1	9683	9683		0	0	1	742190			13254	7895	6664	6694	15934	15934					0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.9823791384697	4	341.98229	1363.90005	-0.20521	-7.0178E-05	-0.24737	-8.4596E-05	-0.45258	-0.00015477	341.98214713026437	21.781	0.63428	22.958	22.505	23.14	1.177					43	20	3	0	0	0	1.0405	1	9112	9112		0	0	1	881240			13255	7895	6664	6694	15935	15935					0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.9821960330009	4	341.98229	1363.90005	0.09863	3.373E-05	-1.5607	-0.00053375	-1.4621	-0.00050002	341.9818488936405	23.981	0.4653	25.222	24.989	25.455	1.241					34	14	3	0	0	0	1.0405	1	10026	10026		0	0	1	956280			13256	7895	6664	6694	15936	15936					0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	341.98229	1363.90005	0.27592	9.4361E-05	1.5333	0.00052435	1.8092	0.00061871	341.9830741785895	22.865	0.36054	23.098	22.922	23.282	0.23306	0.070178	0.0016369	NaN	0	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	850690			13257	7895	6664	6694							0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	341.98229	1363.90005	0.09863	3.373E-05	-1.5607	-0.00053375	-1.4621	-0.00050002	341.9818488936405	23.981	0.4653	25.222	24.989	25.455	1.241	-0.014414	0.00016002	NaN	0	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	956280			13258	7895	6664	6694							0.2326601975576068
KKARLRLPRRA	11	Unmodified	_KKARLRLPRRA_					0	0	0		nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	nc|ENSG00000149571|Q8IZU9-2|KIRREL3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	341.98229	1363.90005	0.067877	2.3213E-05	-1.7908	-0.00061241	-1.7229	-0.0005892	341.9817250661556	23.6	0.54327	25.251	24.96	25.503	1.6511	0.014414	-0.00015464	NaN	0	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	803880			13259	7895	6664	6694							0.2326601975576068
KKARRKQWI	9	Unmodified	_KKARRKQWI_					0	0	0		ENSG00000152785|ENST00000282701|BMP3	ENSG00000152785|ENST00000282701|BMP3	ENSG00000152785|ENST00000282701|BMP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.6936523318291	4	304.196462	1212.75674	-2.9027	-0.000883	-3.2067	-0.00097546	-6.1094	-0.0018585	304.1954182656049	26.349	0.57222	26.349	25.902	26.475	0					28	18	2	0	0	0	0.11941	1	10985	10985		1.0715	0	1	1647400			13260	3338	6665	6695	15937	15937					0.15887592644708093
KKATRGRS	8	Unmodified	_KKATRGRS_					0	0	0			REV__ENST00000395675.4_1_17:18575090-18575600:-|nuORF	REV__ENST00000395675.4_1_17:18575090-18575600:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2787963747978	2	452.277775	902.540997	3.1841	0.0014401	-0.95539	-0.0004321	2.2288	0.001008	452.27718964392153	74.711	0.49658	75.036	74.77	75.267	0.32464					48	15	4	0	0	0	0.89051	1	31318	31318		2.3027	0	1	15798000	+		13261	12840	6666	6696	15938	15938					0.08582831460034868
KKCTLTHDAM	10	Unmodified	_KKCTLTHDAM_					0	0	0		nc|ENSG00000073670|O75078-2|ADAM11;ENSG00000073670|ENST00000200557|ADAM11	nc|ENSG00000073670|O75078-2|ADAM11	nc|ENSG00000073670|O75078-2|ADAM11	MSMS	GG20161007_CRH_Patient100_W632_01	3	574.2863036990166	2	574.283551	1146.55255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.864	1	56.268	55.768	56.768	1.4048								0	0	0	0.65926	1	22962	22962		5.7319	0.97584	1				13262	902	6667	6697	15939	15939					-0.014864756231645515
KKDHKLPNTKG	11	Unmodified	_KKDHKLPNTKG_					0	0	0		ENSG00000170166|ENST00000306324|HOXD4	ENSG00000170166|ENST00000306324|HOXD4	ENSG00000170166|ENST00000306324|HOXD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3706542849541	2	633.369861	1264.72517	2.3357	0.0014794	-1.9062	-0.0012073	0.42956	0.00027207	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	1.0373	1	34398	34398		0.96228	0.50394	1	11549000			13263	4129	6668	6698	15940	15940					0.1033955510006308
KKDKKLGLRK	10	Unmodified	_KKDKKLGLRK_					0	0	0		ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2738830447197	3	405.274952	1212.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.207	1	30.493	29.993	30.993	0.2859								0	0	0	0.66234	1	12657	12657		0.50596	0.23694	1				13264	6850	6669	6699	15941	15941					0.20513612756099064
KKDKKLGLRK	10	Unmodified	_KKDKKLGLRK_					0	0	0		ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2744018435478	3	405.274952	1212.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.682	1	30.967	30.467	31.467	0.2859								0	0	0	0.66234	1	12868	12868		0.50596	0.27011	1				13265	6850	6669	6699	15942	15942					0.20513612756099064
KKDKKLGLRK	10	Unmodified	_KKDKKLGLRK_					0	0	0		ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2744323611259	3	405.274952	1212.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.797	1	31.083	30.583	31.583	0.2859								0	0	0	0.66234	1	12919	12919		0.50596	0.27011	1				13266	6850	6669	6699	15943	15943					0.20513612756099064
KKDKKLGLRK	10	Unmodified	_KKDKKLGLRK_					0	0	0		ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	ENST00000484374.1_1_9:17135063-17166975:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.2744933962822	3	405.274952	1212.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.716	1	31.515	31.015	32.015	1.7987								0	0	0	0.66227	1	12456	12456		0.62683	0.35781	1				13267	6850	6669	6699	15944	15944					0.20513612756099064
KKDRPLCKKHA	11	Unmodified	_KKDRPLCKKHA_					0	0	0		nc|ENSG00000122367|O75112-3|LDB3;nc|ENSG00000122367|O75112-2|LDB3;ENSG00000122367|ENST00000361373|LDB3;nc|ENSG00000122367|O75112-7|LDB3	nc|ENSG00000122367|O75112-3|LDB3	nc|ENSG00000122367|O75112-3|LDB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.9280883669853	3	441.927446	1322.76051	1.3208	0.00058368	1.9633	0.00086764	3.2841	0.0014513	441.92819113380085	39.606	0.52311	39.606	39.297	39.82	0					40	16	3	0	0	0	1.0369	2	16588	16588;16656		1.1098	0.096179	1	1002700			13268	2154	6670	6700	15945;15946	15945					0.11203894356231103
KKDRPLCKKHA	11	Unmodified	_KKDRPLCKKHA_					0	0	0		nc|ENSG00000122367|O75112-3|LDB3;nc|ENSG00000122367|O75112-2|LDB3;ENSG00000122367|ENST00000361373|LDB3;nc|ENSG00000122367|O75112-7|LDB3	nc|ENSG00000122367|O75112-3|LDB3	nc|ENSG00000122367|O75112-3|LDB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.9274474978447	3	441.927446	1322.76051	2.0721	0.00091572	1.3676	0.00060437	3.4397	0.0015201	441.927720242359	38.759	0.59751	39.067	38.888	39.485	0.30857					37	19	2	0	0	0	1.0369	1	16329	16329		1.1098	0	1	871910			13269	2154	6670	6700	15947	15947					0.11203894356231103
KKDRPLCKKHA	11	Unmodified	_KKDRPLCKKHA_					0	0	0		nc|ENSG00000122367|O75112-3|LDB3;nc|ENSG00000122367|O75112-2|LDB3;ENSG00000122367|ENST00000361373|LDB3;nc|ENSG00000122367|O75112-7|LDB3	nc|ENSG00000122367|O75112-3|LDB3	nc|ENSG00000122367|O75112-3|LDB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	441.927446	1322.76051	1.3208	0.00058368	1.9633	0.00086764	3.2841	0.0014513	441.92819113380085	39.606	0.52311	39.606	39.297	39.82	0	0	0	NaN	1.1098	40	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1002700			13270	2154	6670	6700							0.11203894356231103
KKEEIIKTLSK	11	Unmodified	_KKEEIIKTLSK_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000577759.1_1_17:37360679-37360898:+|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.6085082888603	3	439.609777	1315.8075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.376	1	82.093	81.593	82.593	1.7167								0	0	0	0.63775	1	33717	33717		0.50596	0	1				13271	1628;6509	6671	6701	15948	15948					0.16223032388370484
KKEKALPV	8	Unmodified	_KKEKALPV_					0	0	0		tr|A0A553SRI3|A0A553SRI3_NIACID-alanine--D-alanylcarrierproteinligaseOS=NialliacirculansOX=1397GN=dltAPE=3SV=1	tr|A0A553SRI3|A0A553SRI3_NIACID-alanine--D-alanylcarrierproteinligaseOS=NialliacirculansOX=1397GN=dltAPE=3SV=1	tr|A0A553SRI3|A0A553SRI3_NIACID-alanine--D-alanylcarrierproteinligaseOS=NialliacirculansOX=1397GN=dltAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8648559451103	3	304.867411	911.580402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.351	1	23.351	22.851	23.851	0								0	0	0	1.0178	1	9733	9733		2.9952	0.90923	1				13272	16560	6672	6702	15949	15949					0.1210753869089558
KKEKKPLKPLK	11	Unmodified	_KKEKKPLKPLK_					0	0	0			REV__ENSG00000164123|ENST00000434826|C4orf45	REV__ENSG00000164123|ENST00000434826|C4orf45	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	447.1179077029228	3	446.30614	1335.89659	0.7436	0.00033187	-1.5849	-0.00070735	-0.84129	-0.00037547	446.3052777741464	24.6	0.20942	26.285	26.089	26.298	1.6845					9	7	2	0	0	0	0.14606	1	10217	10217		0.094841	0	1	1923200	+		13273	10718	6673	6703	15950	15950					0.2420791213855864
KKEKRRKKH	9	Unmodified	_KKEKRRKKH_					0	0	0			REV__ENSG00000114857|ENST00000232978|NKTR	REV__ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2719909548759	3	413.270312	1236.78911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.439	1	53.762	53.262	54.262	0.32283								0	0	0	0.42693	1	22385	22385		1.0715	0	1		+		13274	9420	6674	6704	15951	15951					0.18018380047692517
KKFERERRLLQ	11	Unmodified	_KKFERERRLLQ_					0	0	0		NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9708434939384	3	501.63532	1501.88413	2.177	0.0010921	-1.2414	-0.00062271	0.93567	0.00046936	501.6345111367571	90.8	1.7886	90.8	89.905	91.693	0					123	56	3	0	0	0	1.0362	1	37816	37816		0.45452	0.37117	1	2114400			13275	8036	6675	6705	15952	15952					0.15326268728222203
KKFILLVV	8	Unmodified	_KKFILLVV_					0	0	0			REV__ENST00000479012.1_1_2:176794697-176802294:-|nuORF	REV__ENST00000479012.1_1_2:176794697-176802294:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.3368713259697	2	480.336239	958.657924	1.4704	0.00070627	0.78128	0.00037528	2.2517	0.0010815	480.33626173772956	109.63	0.74987	109.63	109.33	110.08	0					69	29	3	0	0	0	0.89198	1	47495	47495		0	0	1	16984000	+		13276	13332	6676	6706	15953	15953					0.17694176627105662
KKFILLVV	8	Unmodified	_KKFILLVV_					0	0	0			REV__ENST00000479012.1_1_2:176794697-176802294:-|nuORF	REV__ENST00000479012.1_1_2:176794697-176802294:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.3383361697197	2	480.336239	958.657924	3.2569	0.0015644	2.8852	0.0013859	6.1421	0.0029503	480.33729419646295	109.56	0.65701	109.71	109.54	110.2	0.15898					53	23	3	0	0	0	0.89198	2	47597	47597;47650		0	0	1	10484000	+		13277	13332	6676	6706	15954;15955	15954					0.17694176627105662
KKFKKRKL	8	Unmodified	_KKFKKRKL_					0	0	0			REV__ENSG00000087269|ENST00000416614|NOP14	REV__ENSG00000087269|ENST00000416614|NOP14	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.2554504275322	3	359.253599	1074.73897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.429	1	75.751	75.251	76.251	0.32231								0	0	0	1.0178	1	31545	31545		1.6526	0	1		+		13278	8869	6677	6707	15956	15956					0.204588773898422
KKFKREKRRNF	11	Unmodified	_KKFKREKRRNF_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	768.9654418826103	2	768.965326	1535.9161	3.4264	0.0026348	-1.4121	-0.0010858	2.0143	0.0015489	768.9652102767637	95.434	0.10821	95.855	95.803	95.911	0.4212					5	3	2	0	0	0	1.0366	1	40162	40162		1.1933	0.12188	1	1296300			13279	722	6678	6708	15957	15957					0.16957681202006825
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3555786013603	1	631.3522	630.344923	2.3047	0.0014551	2.4193	0.0015274	4.724	0.0029825	631.3535362140738	50.707	0.53918	50.707	50.373	50.913	0					21	16	2	0	0	0	0.89198	1	21149	21149		0	0	1	1344600			13280	5094	6679	6709	15958	15958					0.014964462861485117
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3550903201103	1	631.3522	630.344923	2.7308	0.0017241	2.5317	0.0015984	5.2625	0.0033225	631.3538240607948	84.638	0.41446	84.638	84.43	84.845	0					18	12	2	0	0	0	0.89198	1	35280	35280		0	0	1	983690			13281	5094	6679	6709	15959	15959					0.014964462861485117
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.3546630740166	1	631.3522	630.344923	1.6265	0.0010269	2.7568	0.0017405	4.3834	0.0027674	631.3538124832327	50.575	0.59196	50.903	50.451	51.043	0.32824					24	18	2	0	0	0	0.89198	3	21054	21054;21157;21202		0	0	1	1171400			13282	5094	6679	6709	15960;15961;15962	15960					0.014964462861485117
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.3556396365166	1	631.3522	630.344923	2.3997	0.0015151	3.2498	0.0020518	5.6495	0.0035668	631.3542708177105	84.409	0.51202	84.67	84.406	84.919	0.26083					23	15	2	0	0	0	0.89198	1	35276	35276		0	0	1	717190			13283	5094	6679	6709	15963	15963					0.014964462861485117
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.3539916872978	1	631.3522	630.344923	1.8743	0.0011833	2.2161	0.0013992	4.0904	0.0025825	631.3534586696917	49.604	0.33915	50.995	50.796	51.135	1.3911					17	10	2	0	0	0	0.89198	1	20761	20761		0	0	1	1737300			13284	5094	6679	6709	15964	15964					0.014964462861485117
KKGAGGGG	8	Unmodified	_KKGAGGGG_					0	0	0		ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.3559448122978	1	631.3522	630.344923	1.2738	0.0008042	3.8995	0.0024619	5.1732	0.0032661	631.3546801474823	49.138	0.37031	51.115	50.947	51.318	1.9772					14	11	2	0	0	0	0.89198	1	20595	20595		0	0	1	796820			13285	5094	6679	6709	15965	15965					0.014964462861485117
KKGKAKGT	8	Unmodified	_KKGKAKGT_					0	0	0		ENST00000563980.5_1_16:90088575-90097598:+|nuORF;ENSG00000141013|ENST00000268699|GAS8	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.2677490115166	2	409.266345	816.518136	2.9263	0.0011977	0.58237	0.00023834	3.5087	0.001436	409.2663199084891	103.96	0.076324	104.02	103.97	104.05	0.059502					6	3	2	0	0	0	0.89178	1	43757	43757		0.69038	0	1	26664000			13286	2945	6680	6710	15966	15966					0.10253812342568835
KKGKAKGT	8	Unmodified	_KKGKAKGT_					0	0	0		ENST00000563980.5_1_16:90088575-90097598:+|nuORF;ENSG00000141013|ENST00000268699|GAS8	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	409.266345	816.518136	-0.045584	-1.8656E-05	3.3666	0.0013778	3.321	0.0013592	409.2673437851193	103.98	0.058487	103.98	103.93	103.99	0	-0.045145	0.0018845	NaN	0.69038	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13041000			13287	2945	6680	6710							0.10253812342568835
KKGKAKGT	8	Unmodified	_KKGKAKGT_					0	0	0		ENST00000563980.5_1_16:90088575-90097598:+|nuORF;ENSG00000141013|ENST00000268699|GAS8	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	ENST00000563980.5_1_16:90088575-90097598:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	409.266345	816.518136	2.8668	0.0011733	0.049008	2.0057E-05	2.9158	0.0011933	409.26602384809735	103.92	0.075546	104.08	104.05	104.13	0.16055	0.051606	-0.00083105	NaN	0.69038	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16449000			13288	2945	6680	6710							0.10253812342568835
KKGKSVVR	8	Unmodified	_KKGKSVVR_					0	0	0			REV__ENSG00000112852|ENST00000194155|PCDHB2	REV__ENSG00000112852|ENST00000194155|PCDHB2	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.2007018923759	3	301.202905	900.586885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.769	1	50.769	50.269	51.269	0								0	0	0	1.0178	1	21176	21176		0.45834	0	1		+		13289	9372	6681	6711	15967	15967					0.13261476642276193
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2729675173759	2	412.273638	822.532724	0.2395	9.8741E-05	-2.7803	-0.0011462	-2.5408	-0.0010475	412.27230947665583	33.437	0.92465	33.437	33.296	34.221	0					51	29	2	0	0	0	0.89176	1	14057	14057		0.79363	0	1	1897700			13290	2464	6682	6712	15968	15968					0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2764160037041	2	412.273638	822.532724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.401	1	46.401	45.901	46.901	0								0	0	0	1.0178	1	19401	19401		0.79363	0	1				13291	2464	6682	6712	15969	15969					0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2725402712822	2	412.273638	822.532724	1.3398	0.00055237	-3.4275	-0.0014131	-2.0877	-0.00086071	412.27221499595385	30.221	0.9711	30.507	30.115	31.087	0.2859					57	32	2	0	0	0	0.89176	1	12607	12607		0.79363	0	1	2817600			13292	2464	6682	6712	15970	15970					0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2730590701103	2	412.273638	822.532724	1.4345	0.00059141	-2.9342	-0.0012097	-1.4997	-0.00061827	412.2724233429208	31.958	0.89665	32.248	31.905	32.802	0.29086					51	28	2	0	0	0	0.89176	1	13437	13437		0.79363	0	1	2419800			13293	2464	6682	6712	15971	15971					0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2728759646416	2	412.273638	822.532724	0.52438	0.00021619	-2.1095	-0.00086969	-1.5851	-0.0006535	412.27265443362126	30.759	1.0625	32.041	31.564	32.626	1.2825					50	33	2	0	0	0	0.89176	1	12939	12939		0.79363	0	1	2197100			13294	2464	6682	6712	15972	15972					0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	412.273638	822.532724	0.70356	0.00029006	-3.3417	-0.0013777	-2.6382	-0.0010877	412.27230073258363	28.995	0.93945	30.278	29.825	30.764	1.2825	-0.03948	-2.3453E-05	NaN	0.79363	47	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3141100			13295	2464	6682	6712							0.11435884490686021
KKGPLIAP	8	Unmodified	_KKGPLIAP_					0	0	0		ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	ENSG00000130821|ENST00000253122|SLC6A8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	412.273638	822.532724	0.68712	0.00028328	-3.1943	-0.0013169	-2.5072	-0.0010336	412.27225361541883	28.392	1.0905	30.167	29.696	30.787	1.7754	-0.15013	9.8148E-05	NaN	0.79363	61	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6156500			13296	2464	6682	6712							0.11435884490686021
KKGVVGTT	8	Unmodified	_KKGVVGTT_					0	0	0			REV__ENST00000508451.1_1_5:10250422-10254994:+|nuORF	REV__ENST00000508451.1_1_5:10250422-10254994:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	395.2443420290947	2	395.245078	788.475603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.6	1	101.66	101.16	102.16	0.067009								0	0	0	1.0178	1	42538	42538		2.5775	0	1		+		13297	13553	6683	6713	15973	15973					0.07290417214323952
KKHEEFRWM	9	Unmodified	_KKHEEFRWM_					0	0	0		ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883239626884	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.95	1	111	110.5	111.5	0.047043								0	0	0	0.42693	1	47847	47847		0.23584	0	1				13298	3312	6684	6714	15974	15974					0.0006796813111122901
KKHQIKMI	8	Unmodified	_KKHQIKMI_					0	0	0		tr|A0A553SUI4|A0A553SUI4_NIACIPLP-dependentaminotransferasefamilyprotein(Fragment)OS=NialliacirculansOX=1397GN=CEQ21_07055PE=3SV=1	tr|A0A553SUI4|A0A553SUI4_NIACIPLP-dependentaminotransferasefamilyprotein(Fragment)OS=NialliacirculansOX=1397GN=CEQ21_07055PE=3SV=1	tr|A0A553SUI4|A0A553SUI4_NIACIPLP-dependentaminotransferasefamilyprotein(Fragment)OS=NialliacirculansOX=1397GN=CEQ21_07055PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.2123901247978	3	342.547795	1024.62156	0.22419	7.6796E-05	-0.1952	-6.6867E-05	0.028985	9.9288E-06	342.5476392872198	27.401	0.76857	29.167	28.732	29.5	1.7661					59	23	4	0	0	0	0.89124	1	11515	11515		1.8442	0	1	5022800			13299	16695	6685	6715	15975	15975					0.11022976458730227
KKIGKSRTT	9	Unmodified	_KKIGKSRTT_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8241454958916	2	509.822015	1017.62948	4.1495	0.0021155	1.0105	0.00051519	5.16	0.0026307	509.82226745779195	90.499	0.42031	91.865	91.607	92.027	1.366					25	12	3	0	0	0	0.85068	1	38094	38094		0.45834	0.057624	1	1486000			13300	2486	6686	6716	15976	15976					0.12136826979849502
KKIKDHLLLIK	11	Unmodified	_KKIKDHLLLIK_					0	0	0		nc|ENSG00000170959|M0R2J8-3|DCDC1;nc|ENSG00000170959|M0R2J8|DCDC1;ENSG00000170959|ENST00000684477|DCDC1	nc|ENSG00000170959|M0R2J8-3|DCDC1	nc|ENSG00000170959|M0R2J8-3|DCDC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9820739626884	4	337.981424	1347.89659	0.11537	3.8992E-05	2.518	0.00085103	2.6333	0.00089002	337.98209974058784	25.471	1.0381	27.188	26.514	27.552	1.7167					86	33	4	0	0	0	1.0402	1	10598	10598		0.073264	0	1	4738500			13301	4170	6687	6717	15977	15977					0.2365591213854259
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.9814025759697	4	341.981159	1363.89553	0.033698	1.1524E-05	1.0108	0.00034567	1.0445	0.0003572	341.9814995442447	23.602	0.76709	24.816	24.258	25.025	1.2145					45	24	3	0	0	0	1.0405	1	9909	9909		0	0	1	644920	+		13302	13068	6688	6718	15978	15978					0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.9812805056572	4	341.981159	1363.89553	-0.022194	-7.59E-06	0.95233	0.00032568	0.93014	0.00031809	341.98160569469337	21.438	0.72124	23.054	22.45	23.171	1.6158					31	23	2	0	0	0	1.0405	1	8921	8921		0	0	1	939190	+		13303	13068	6688	6718	15979	15979					0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.9816772341728	4	341.981159	1363.89553	0.041593	1.4224E-05	1.086	0.00037139	1.1276	0.00038561	342.23211480309124	23.039	0.75878	24.69	24.201	24.96	1.6511					37	24	2	0	0	0	1.0405	1	9565	9565		0	0	1	953730	+		13304	13068	6688	6718	15980	15980					0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	341.1786071658134	4	341.981159	1363.89553	-0.022194	-7.59E-06	0.95233	0.00032568	0.93014	0.00031809	341.98160569469337	21.438	0.72124	23.054	22.45	23.171	1.6158					31	23	2	0	0	0	0.14606	1	8698	8698		0	0	1	939190	+		13305	13068	6688	6718	15981	15981					0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	341.1796142458916	4	341.981159	1363.89553	0.041593	1.4224E-05	1.086	0.00037139	1.1276	0.00038561	342.23211480309124	23.039	0.75878	24.69	24.201	24.96	1.6511					37	24	2	0	0	0	0.14606	1	9434	9434		0	0	1	953730	+		13306	13068	6688	6718	15982	15982					0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	341.981159	1363.89553	0.36608	0.00012519	0.90413	0.0003092	1.2702	0.00043439	341.9816914513866	24.82	1.0384	25.062	24.257	25.296	0.24251	0.206	-0.00013534	NaN	0	44	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	916810	+		13307	13068	6688	6718							0.22813697769652208
KKILIIKKAFY	11	Unmodified	_KKILIIKKAFY_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	341.981159	1363.89553	0.033698	1.1524E-05	1.0108	0.00034567	1.0445	0.0003572	341.9814995442447	23.602	0.76709	24.816	24.258	25.025	1.2145	-0.039772	1.0565E-05	NaN	0	45	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644920	+		13308	13068	6688	6718							0.22813697769652208
KKIPRLGAKT	10	Unmodified	_KKIPRLGAKT_					0	0	0		tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	556.3718749880791	2	556.369133	1110.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105	1	105.16	104.66	105.66	0.16679								0	0	0	0.66243	1	44566	44566		0.35063	0	1				13309	16122	6689	6719	15983	15983					0.17277965801986284
KKIRRKREFR	10	Unmodified	_KKIRRKREFR_					0	0	0		ENSG00000130560|ENST00000371756|UBAC1;ENST00000465873.5_1_9:138834060-138837107:-|nuORF;ENST00000471163.1_1_9:138834060-138839712:-|nuORF	ENSG00000130560|ENST00000371756|UBAC1	ENSG00000130560|ENST00000371756|UBAC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	354.9802123904228	4	354.981019	1415.89497	-1.1576	-0.00041092	-0.52383	-0.00018595	-1.6814	-0.00059687	354.9807099549092	39.377	1.5165	39.377	38.782	40.299	0					196	49	5	0	0	0	0.89803	7	16440	16440;16478;16517;16557;16595;16636;16683		0.62683	0.50396	1	17614000			13310	2442	6690	6720	15984;15985;15986;15987;15988;15989;15990	15984					0.20365715893126435
KKIRRKREFR	10	Unmodified	_KKIRRKREFR_					0	0	0		ENSG00000130560|ENST00000371756|UBAC1;ENST00000465873.5_1_9:138834060-138837107:-|nuORF;ENST00000471163.1_1_9:138834060-138839712:-|nuORF	ENSG00000130560|ENST00000371756|UBAC1	ENSG00000130560|ENST00000371756|UBAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3058654665947	3	472.972266	1415.89497	1.1064	0.0005233	-3.1665	-0.0014977	-2.0601	-0.00097436	472.97063471594606	33.475	0.28645	35.298	35.202	35.489	1.8227					66	24	4	0	0	0	0.89803	1	14091	14091		0.62683	0.17231	1	63957000			13311	2442	6690	6720	15991	15991					0.20365715893126435
KKIVLKPKIPA	11	Unmodified	_KKIVLKPKIPA_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1235.675219714642	1	1234.86094	1233.85366	1.4952	0.0018464	0.66003	0.00081505	2.1553	0.0026615	1235.8603868419564	32.216	0.30761	32.216	32.01	32.318	0					10	9	2	0	0	0	0.14606	1	13463	13463		0.35063	0.35063	1	446330			13312	3425;7900	6691	6721	15992	15992					0.2460914208113536
KKIVPLCWF	9	Unmodified	_KKIVPLCWF_					0	0	0			REV__ENSG00000116221|ENST00000360840|MRPL37	REV__ENSG00000116221|ENST00000360840|MRPL37	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3309814333916	2	567.33063	1132.64671	1.5387	0.00087294	-0.72007	-0.00040852	0.81861	0.00046442	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.83213	1	31533	31533		2.0598	0.40713	1	6327800	+		13313	9471	6692	6722	15993	15993					0.08569031261276905
KKIYDREGIK	10	Unmodified	_KKIYDREGIK_					0	0	0			REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	REV__tr|A0A7D6ZXI8|A0A7D6ZXI8_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2476074099541	3	417.24695	1248.71902	-0.58344	-0.00024344	2.4659	0.0010289	1.8825	0.00078545	417.24801420444913	11.833	0.36829	11.833	11.696	12.064	0					32	11	4	0	0	0	0.67383	1	4872	4872		19.626	3.8873	1	12725000	+		13314	15762	6693	6723	15994	15994					0.10461036868559859
KKIYRGDIKE	10	Unmodified	_KKIYRGDIKE_					0	0	0			REV__tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	REV__tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.2469665408134	3	417.24695	1248.71902	-0.52169	-0.00021767	0.40962	0.00017091	-0.11207	-4.6762E-05	417.247158541297	10.973	0.73845	11.643	11.338	12.077	0.66934					57	23	3	0	0	0	0.83992	2	4545	4545;4598		7.9454	0	1	2744600	+		13315	15621	6694	6724	15995;15996	15995					0.10461036868582596
KKKDKVIQT	9	Unmodified	_KKKDKVIQT_					0	0	0			REV__ENSG00000185002|ENST00000332958|RFX6	REV__ENSG00000185002|ENST00000332958|RFX6	MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3473388552666	2	544.345323	1086.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.26	1	104.43	103.93	104.93	0.1731								0	0	0	0.42693	1	44062	44062		1.8442	0	1		+		13316	11439	6695	6725	15997	15997					0.13622266811125883
KKKEEWTL	8	Unmodified	_KKKEEWTL_					0	0	0			REV__ENSG00000186834|ENST00000332499|HEXIM1	REV__ENSG00000186834|ENST00000332499|HEXIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3030883669853	2	531.303124	1060.5917	2.6947	0.0014317	-0.89758	-0.00047689	1.7971	0.00095483	531.3021046710595	71.083	0.51727	72.424	72.054	72.571	1.3415					24	11	3	0	0	0	0.87106	1	29840	29840		14.582	1.0738	1	3630900	+		13317	11514	6696	6726	15998	15998					0.06382315994369492
KKKELNRL	8	Unmodified	_KKKELNRL_					0	0	0			REV__ENST00000528856.5_1_11:34073295-34118749:+|nuORF	REV__ENST00000528856.5_1_11:34073295-34118749:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	514.2404052615166	2	514.832383	1027.65021	1.4596	0.00075145	2.3626	0.0012163	3.8222	0.0019678	514.8337024225405	101.82	0.12254	101.82	101.74	101.86	0					7	3	3	0	0	0	2.3239	1	42658	42658		0.69038	0	1	3176500	+		13318	9937	6697	6727	15999	15999					0.13749417359508698
KKKEPNKSK	9	Unmodified	_KKKEPNKSK_					0	0	0			REV__ENST00000418595.1_1_6:112937907-112938114:-|nuORF	REV__ENST00000418595.1_1_6:112937907-112938114:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2525817751884	3	362.892507	1085.65569	-1.5275	-0.00055431	1.8311	0.00066449	0.3036	0.00011017	362.89274064279545	9.7934	0.22824	10.444	10.262	10.491	0.65058					11	7	2	0	0	0	0.11941	1	4048	4048		1.0715	0.67075	1	2248000	+		13319	12958	6698	6728	16000	16000					0.11629096151318663
KKKEPNKSK	9	Unmodified	_KKKEPNKSK_					0	0	0			REV__ENST00000418595.1_1_6:112937907-112938114:-|nuORF	REV__ENST00000418595.1_1_6:112937907-112938114:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	362.892507	1085.65569	-2.1546	-0.0007819	2.6087	0.00094668	0.45407	0.00016478	362.8932440374939	10.107	0.63385	10.107	9.5802	10.214	0	-0.16861	0.00030087	NaN	1.0715	58	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6239000	+		13320	12958	6698	6728							0.11629096151318663
KKKGNKYLVF	10	Unmodified	_KKKGNKYLVF_					0	0	0			REV__ENST00000313285.12_1_19:6751225-6751516:+|nuORF	REV__ENST00000313285.12_1_19:6751225-6751516:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8813354372978	2	612.876791	1223.73903	4.008	0.0024564	2.4995	0.0015319	6.5076	0.0039883	612.8782070159842	91.666	0.55401	92.602	92.307	92.861	0.93623					56	17	4	0	0	0	0.87699	1	38548	38548		3.9444	0.3479	1	20272000	+		13321	12375	6699	6729	16001	16001					0.13610832599169953
KKKGRRKKPKL	11	Unmodified	_KKKGRRKKPKL_					0	0	0			REV__AGAP1-PINX1|1|fusion	REV__AGAP1-PINX1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3199340701103	3	456.320895	1365.94086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.138	1	99.219	98.719	99.719	0.080376								0	0	0	0.63775	1	41505	41505		0.094841	0.094841	1		+		13322	8093	6700	6730	16002	16002					0.2725236107539786
KKKIFYLVVKV	11	Unmodified	_KKKIFYLVVKV_					0	0	0			REV__tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	REV__tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.2118408083916	4	341.981159	1363.89553	0.49429	0.00016904	-0.59756	-0.00020435	-0.10326	-3.5314E-05	341.98070775908707	26.858	0.31115	27.12	27.049	27.36	0.26173					16	9	2	0	0	0	0.14606	1	11306	11306		0.094841	0.094841	1	674640	+		13323	15428	6701	6731	16003	16003					0.22813697769606733
KKKIIFFKN	9	Unmodified	_KKKIIFFKN_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|266|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3779785037041	2	583.376426	1164.7383	0.63201	0.0003687	2.0695	0.0012073	2.7015	0.001576	583.3775741063457	27.124	0.71151	28.871	28.524	29.235	1.747					49	22	3	0	0	0	0.85206	1	11452	11452		0	0	1	4237900			13324	7752	6702	6732	16004	16004					0.16252037950130216
KKKIQRRHKV	10	Unmodified	_KKKIQRRHKV_					0	0	0			REV__ENST00000405954.1_1_2:241501074-241501230:+|nuORF	REV__ENST00000405954.1_1_2:241501074-241501230:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2214233279228	4	330.972928	1319.86261	0.12312	4.0749E-05	0.25666	8.4947E-05	0.37978	0.0001257	331.22354703715115	22.295	1.1264	22.518	21.992	23.119	0.223					50	37	2	0	0	0	0.89803	1	9241	9241		0.15932	0.064481	1	1957000	+		13325	12898	6703	6733	16005	16005					0.21546928490147366
KKKKDKMLK	9	Unmodified	_KKKKDKMLK_					0	0	0		ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	MSMS	GG20161007_CRH_Patient100_W632_02	4	382.9221374392509	3	382.917888	1145.73183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.173	1	56.141	55.641	56.641	1.9684								0	0	0	0.42693	1	22694	22694		4.1895	1.5583	1				13326	5247	6704	6734	16006	16006					0.16479776727078388
KKKKGIVG	8	Unmodified	_KKKKGIVG_					0	0	0			REV__nc|ENSG00000151327|Q8N128|FAM177A1	REV__nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.3015930056572	2	429.300188	856.585822	0.52665	0.00022609	1.2798	0.00054943	1.8065	0.00077552	429.3006273567653	107.87	0.23469	107.87	107.74	107.97	0					36	12	4	0	0	0	0.89198	2	46316	46316;46393		0	0	1	420090000	+		13327	10399	6705	6735	16007;16008	16007					0.15179262273386485
KKKKGIVG	8	Unmodified	_KKKKGIVG_					0	0	0			REV__nc|ENSG00000151327|Q8N128|FAM177A1	REV__nc|ENSG00000151327|Q8N128|FAM177A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	429.300188	856.585822	0.52665	0.00022609	1.2798	0.00054943	1.8065	0.00077552	429.3006273567653	107.87	0.23469	107.87	107.74	107.97	0	0	0	NaN	0	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420090000	+		13328	10399	6705	6735							0.15179262273386485
KKKKIKKLVF	10	Unmodified	_KKKKIKKLVF_					0	0	0			REV__nc|ENSG00000081019|Q5VWQ0-4|RSBN1	REV__nc|ENSG00000081019|Q5VWQ0-4|RSBN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	630.4495727419853	2	630.449926	1258.8853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.966	1	97.272	96.772	97.772	0.3062								0	0	0	0.6624	1	40787	40787		0.40072	0.40072	1		+		13329	8812	6706	6736	16009	16009					0.2662113483504527
KKKKKKAT	8	Unmodified	_KKKKKKAT_					0	0	0			REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|43|1|sense	REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|43|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.3408386111259	2	480.339844	958.665135	3.1546	0.0015153	-3.5364	-0.0016987	-0.38176	-0.00018338	480.33767929475925	109.57	0.62939	109.73	109.47	110.09	0.1548					51	23	3	0	0	0	0.89178	1	47554	47554		0.69038	0	1	6933300	+		13330	14333	6707	6737	16010	16010					0.18414909227499265
KKKKKKGG	8	Unmodified	_KKKKKKGG_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.2161132693291	3	301.215033	900.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.07	1	118.23	117.73	118.73	0.16145								0	0	0	1.0178	1	50982	50982		0	0	1				13331	4457	6708	6738	16011	16011					0.168983535389998
KKKKKKGG	8	Unmodified	_KKKKKKGG_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.2159301638603	3	301.215033	900.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.33	1	118.49	117.99	118.99	0.16237								0	0	0	1.0178	1	51086	51086		0	0	1				13332	4457	6708	6738	16012	16012					0.168983535389998
KKKKKKGG	8	Unmodified	_KKKKKKGG_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.2164794802666	3	301.215033	900.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.58	1	118.74	118.24	119.24	0.16237								0	0	0	1.0178	1	51189	51189		0	0	1				13333	4457	6708	6738	16013	16013					0.168983535389998
KKKKKKGG	8	Unmodified	_KKKKKKGG_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.2169372439384	3	301.215033	900.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.81	1	118.97	118.47	119.47	0.16237								0	0	0	1.0178	1	51282	51282		0	0	1				13334	4457	6708	6738	16014	16014					0.168983535389998
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.025325	1	0.025325	-0.47468	0.52532	0								0	0	0	0.66264	1	10	10		0	0	1		+		13335	9895	6709	6739	16015	16015					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.13047	1	0.13047	-0.36953	0.63047	0								0	0	0	0.66264	1	53	53		0	0	1		+		13336	9895	6709	6739	16016	16016					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.22742	1	0.22742	-0.27258	0.72742	0								0	0	0	0.66264	1	93	93		0	0	1		+		13337	9895	6709	6739	16017	16017					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.54576	1	0.54576	0.045763	1.0458	0								0	0	0	0.66264	1	223	223		0	0	1		+		13338	9895	6709	6739	16018	16018					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.751	1	0.751	0.251	1.251	0								0	0	0	0.66264	1	308	308		0	0	1		+		13339	9895	6709	6739	16019	16019					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0556	1	1.0556	0.55562	1.5556	0								0	0	0	0.66264	1	433	433		0	0	1		+		13340	9895	6709	6739	16020	16020					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1516	1	1.1516	0.65159	1.6516	0								0	0	0	0.66264	1	473	473		0	0	1		+		13341	9895	6709	6739	16021	16021					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.26	1	1.26	0.76	1.76	0								0	0	0	0.66264	1	517	517		0	0	1		+		13342	9895	6709	6739	16022	16022					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3736	1	1.3736	0.87358	1.8736	0								0	0	0	0.66264	1	564	564		0	0	1		+		13343	9895	6709	6739	16023	16023					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0709	1	2.0709	1.5709	2.5709	0								0	0	0	0.66264	1	849	849		0	0	1		+		13344	9895	6709	6739	16024	16024					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2752	1	2.2752	1.7752	2.7752	0								0	0	0	0.66264	1	933	933		0	0	1		+		13345	9895	6709	6739	16025	16025					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5725	1	2.5725	2.0725	3.0725	0								0	0	0	0.66264	1	1055	1055		0	0	1		+		13346	9895	6709	6739	16026	16026					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6718	1	2.6718	2.1718	3.1718	0								0	0	0	0.66264	1	1096	1096		0	0	1		+		13347	9895	6709	6739	16027	16027					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7693	1	2.7693	2.2693	3.2693	0								0	0	0	0.66264	1	1135	1135		0	0	1		+		13348	9895	6709	6739	16028	16028					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9806	1	2.9806	2.4806	3.4806	0								0	0	0	0.66264	1	1222	1222		0	0	1		+		13349	9895	6709	6739	16029	16029					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1795	1	3.1795	2.6795	3.6795	0								0	0	0	0.66264	1	1304	1304		0	0	1		+		13350	9895	6709	6739	16030	16030					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2736	1	3.2736	2.7736	3.7736	0								0	0	0	0.66264	1	1343	1343		0	0	1		+		13351	9895	6709	6739	16031	16031					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.379	1	3.379	2.879	3.879	0								0	0	0	0.66264	1	1387	1387		0	0	1		+		13352	9895	6709	6739	16032	16032					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8033	1	3.8033	3.3033	4.3033	0								0	0	0	0.66264	1	1562	1562		0	0	1		+		13353	9895	6709	6739	16033	16033					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.914	1	3.914	3.414	4.414	0								0	0	0	0.66264	1	1608	1608		0	0	1		+		13354	9895	6709	6739	16034	16034					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2039	1	4.2039	3.7039	4.7039	0								0	0	0	0.66264	1	1728	1728		0	0	1		+		13355	9895	6709	6739	16035	16035					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3131	1	4.3131	3.8131	4.8131	0								0	0	0	0.66264	1	1773	1773		0	0	1		+		13356	9895	6709	6739	16036	16036					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6109	1	4.6109	4.1109	5.1109	0								0	0	0	0.66264	1	1894	1894		0	0	1		+		13357	9895	6709	6739	16037	16037					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7124	1	4.7124	4.2124	5.2124	0								0	0	0	0.66264	1	1936	1936		0	0	1		+		13358	9895	6709	6739	16038	16038					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1188	1	5.1188	4.6188	5.6188	0								0	0	0	0.66264	1	2102	2102		0	0	1		+		13359	9895	6709	6739	16039	16039					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.712	1	5.712	5.212	6.212	0								0	0	0	0.66264	1	2347	2347		0	0	1		+		13360	9895	6709	6739	16040	16040					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9123	1	5.9123	5.4123	6.4123	0								0	0	0	0.66264	1	2430	2430		0	0	1		+		13361	9895	6709	6739	16041	16041					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0099	1	6.0099	5.5099	6.5099	0								0	0	0	0.66264	1	2470	2470		0	0	1		+		13362	9895	6709	6739	16042	16042					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4335	1	6.4335	5.9335	6.9335	0								0	0	0	0.66264	1	2642	2642		0	0	1		+		13363	9895	6709	6739	16043	16043					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5371	1	6.5371	6.0371	7.0371	0								0	0	0	0.66264	1	2685	2685		0	0	1		+		13364	9895	6709	6739	16044	16044					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7405	1	6.7405	6.2405	7.2405	0								0	0	0	0.66264	1	2769	2769		0	0	1		+		13365	9895	6709	6739	16045	16045					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9312	1	6.9312	6.4312	7.4312	0								0	0	0	0.66264	1	2848	2848		0	0	1		+		13366	9895	6709	6739	16046	16046					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3608	1	7.3608	6.8608	7.8608	0								0	0	0	0.66264	1	3026	3026		0	0	1		+		13367	9895	6709	6739	16047	16047					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7513	1	7.7513	7.2513	8.2513	0								0	0	0	0.66264	1	3187	3187		0	0	1		+		13368	9895	6709	6739	16048	16048					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0447	1	8.0447	7.5447	8.5447	0								0	0	0	0.66264	1	3308	3308		0	0	1		+		13369	9895	6709	6739	16049	16049					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1404	1	8.1404	7.6404	8.6404	0								0	0	0	0.66264	1	3348	3348		0	0	1		+		13370	9895	6709	6739	16050	16050					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7561	1	8.7561	8.2561	9.2561	0								0	0	0	0.66264	1	3603	3603		0	0	1		+		13371	9895	6709	6739	16051	16051					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.951	1	35.951	35.451	36.451	0								0	0	0	0.66264	1	15072	15072		0	0	1		+		13372	9895	6709	6739	16052	16052					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.685	1	46.685	46.185	47.185	0								0	0	0	0.66264	1	19514	19514		0	0	1		+		13373	9895	6709	6739	16053	16053					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.618	1	47.618	47.118	48.118	0								0	0	0	0.66264	1	19896	19896		0	0	1		+		13374	9895	6709	6739	16054	16054					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.932	1	47.932	47.432	48.432	0								0	0	0	0.66264	1	20026	20026		0	0	1		+		13375	9895	6709	6739	16055	16055					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.084	1	48.084	47.584	48.584	0								0	0	0	0.66264	1	20087	20087		0	0	1		+		13376	9895	6709	6739	16056	16056					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.499	1	49.499	48.999	49.999	0								0	0	0	0.66264	1	20662	20662		0	0	1		+		13377	9895	6709	6739	16057	16057					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.62	1	49.62	49.12	50.12	0								0	0	0	0.66264	1	20711	20711		0	0	1		+		13378	9895	6709	6739	16058	16058					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.72	1	49.72	49.22	50.22	0								0	0	0	0.66264	1	20751	20751		0	0	1		+		13379	9895	6709	6739	16059	16059					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.865	1	49.865	49.365	50.365	0								0	0	0	0.66264	1	20810	20810		0	0	1		+		13380	9895	6709	6739	16060	16060					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.05	1	50.05	49.55	50.55	0								0	0	0	0.66264	1	20884	20884		0	0	1		+		13381	9895	6709	6739	16061	16061					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.877	1	50.877	50.377	51.377	0								0	0	0	0.66264	1	21221	21221		0	0	1		+		13382	9895	6709	6739	16062	16062					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.818	1	51.818	51.318	52.318	0								0	0	0	0.66264	1	21611	21611		0	0	1		+		13383	9895	6709	6739	16063	16063					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.971	1	51.971	51.471	52.471	0								0	0	0	0.66264	1	21675	21675		0	0	1		+		13384	9895	6709	6739	16064	16064					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.249	1	52.249	51.749	52.749	0								0	0	0	0.66264	1	21792	21792		0	0	1		+		13385	9895	6709	6739	16065	16065					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.481	1	52.481	51.981	52.981	0								0	0	0	0.66264	1	21887	21887		0	0	1		+		13386	9895	6709	6739	16066	16066					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.721	1	52.721	52.221	53.221	0								0	0	0	0.66264	1	21987	21987		0	0	1		+		13387	9895	6709	6739	16067	16067					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.245	1	53.245	52.745	53.745	0								0	0	0	0.66264	1	22204	22204		0	0	1		+		13388	9895	6709	6739	16068	16068					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.572	1	53.572	53.072	54.072	0								0	0	0	0.66264	1	22338	22338		0	0	1		+		13389	9895	6709	6739	16069	16069					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.67	1	53.67	53.17	54.17	0								0	0	0	0.66264	1	22378	22378		0	0	1		+		13390	9895	6709	6739	16070	16070					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.767	1	53.767	53.267	54.267	0								0	0	0	0.66264	1	22417	22417		0	0	1		+		13391	9895	6709	6739	16071	16071					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.957	1	53.957	53.457	54.457	0								0	0	0	0.66264	1	22494	22494		0	0	1		+		13392	9895	6709	6739	16072	16072					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.177	1	54.177	53.677	54.677	0								0	0	0	0.66264	1	22583	22583		0	0	1		+		13393	9895	6709	6739	16073	16073					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2852355837822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.279	1	54.279	53.779	54.779	0								0	0	0	0.66264	1	22623	22623		0	0	1		+		13394	9895	6709	6739	16074	16074					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.421	1	54.421	53.921	54.921	0								0	0	0	0.66264	1	22682	22682		0	0	1		+		13395	9895	6709	6739	16075	16075					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.616	1	54.616	54.116	55.116	0								0	0	0	0.66264	1	22760	22760		0	0	1		+		13396	9895	6709	6739	16076	16076					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2852355837822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.712	1	54.712	54.212	55.212	0								0	0	0	0.66264	1	22798	22798		0	0	1		+		13397	9895	6709	6739	16077	16077					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2852661013603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.809	1	54.809	54.309	55.309	0								0	0	0	0.66264	1	22837	22837		0	0	1		+		13398	9895	6709	6739	16078	16078					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.914	1	54.914	54.414	55.414	0								0	0	0	0.66264	1	22879	22879		0	0	1		+		13399	9895	6709	6739	16079	16079					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837097048759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.24	1	55.24	54.74	55.74	0								0	0	0	0.66264	1	23013	23013		0	0	1		+		13400	9895	6709	6739	16080	16080					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2834655642509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.329	1	55.329	54.829	55.829	0								0	0	0	0.66264	1	23049	23049		0	0	1		+		13401	9895	6709	6739	16081	16081					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.423	1	55.423	54.923	55.923	0								0	0	0	0.66264	1	23087	23087		0	0	1		+		13402	9895	6709	6739	16082	16082					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.542	1	55.542	55.042	56.042	0								0	0	0	0.66264	1	23136	23136		0	0	1		+		13403	9895	6709	6739	16083	16083					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.647	1	55.647	55.147	56.147	0								0	0	0	0.66264	1	23180	23180		0	0	1		+		13404	9895	6709	6739	16084	16084					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2832214236259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.757	1	55.757	55.257	56.257	0								0	0	0	0.66264	1	23228	23228		0	0	1		+		13405	9895	6709	6739	16085	16085					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2830688357353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.874	1	55.874	55.374	56.374	0								0	0	0	0.66264	1	23279	23279		0	0	1		+		13406	9895	6709	6739	16086	16086					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.997	1	55.997	55.497	56.497	0								0	0	0	0.66264	1	23332	23332		0	0	1		+		13407	9895	6709	6739	16087	16087					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.116	1	56.116	55.616	56.616	0								0	0	0	0.66264	1	23386	23386		0	0	1		+		13408	9895	6709	6739	16088	16088					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.229	1	56.229	55.729	56.729	0								0	0	0	0.66264	1	23438	23438		0	0	1		+		13409	9895	6709	6739	16089	16089					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.337	1	56.337	55.837	56.837	0								0	0	0	0.66264	1	23487	23487		0	0	1		+		13410	9895	6709	6739	16090	16090					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.569	1	56.569	56.069	57.069	0								0	0	0	0.66264	1	23590	23590		0	0	1		+		13411	9895	6709	6739	16091	16091					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.72	1	56.72	56.22	57.22	0								0	0	0	0.66264	1	23656	23656		0	0	1		+		13412	9895	6709	6739	16092	16092					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.839	1	56.839	56.339	57.339	0								0	0	0	0.66264	1	23710	23710		0	0	1		+		13413	9895	6709	6739	16093	16093					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.976	1	56.976	56.476	57.476	0								0	0	0	0.66264	1	23774	23774		0	0	1		+		13414	9895	6709	6739	16094	16094					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2830383181572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.275	1	57.275	56.775	57.775	0								0	0	0	0.66264	1	23901	23901		0	0	1		+		13415	9895	6709	6739	16095	16095					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.399	1	57.399	56.899	57.899	0								0	0	0	0.66264	1	23954	23954		0	0	1		+		13416	9895	6709	6739	16096	16096					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.503	1	57.503	57.003	58.003	0								0	0	0	0.66264	1	23997	23997		0	0	1		+		13417	9895	6709	6739	16097	16097					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.624	1	57.624	57.124	58.124	0								0	0	0	0.66264	1	24046	24046		0	0	1		+		13418	9895	6709	6739	16098	16098					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.75	1	57.75	57.25	58.25	0								0	0	0	0.66264	1	24098	24098		0	0	1		+		13419	9895	6709	6739	16099	16099					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.875	1	57.875	57.375	58.375	0								0	0	0	0.66264	1	24149	24149		0	0	1		+		13420	9895	6709	6739	16100	16100					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.972	1	57.972	57.472	58.472	0								0	0	0	0.66264	1	24188	24188		0	0	1		+		13421	9895	6709	6739	16101	16101					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.071	1	58.071	57.571	58.571	0								0	0	0	0.66264	1	24228	24228		0	0	1		+		13422	9895	6709	6739	16102	16102					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.197	1	58.197	57.697	58.697	0								0	0	0	0.66264	1	24279	24279		0	0	1		+		13423	9895	6709	6739	16103	16103					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.325	1	58.325	57.825	58.825	0								0	0	0	0.66264	1	24331	24331		0	0	1		+		13424	9895	6709	6739	16104	16104					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.42	1	58.42	57.92	58.92	0								0	0	0	0.66264	1	24369	24369		0	0	1		+		13425	9895	6709	6739	16105	16105					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.516	1	58.516	58.016	59.016	0								0	0	0	0.66264	1	24407	24407		0	0	1		+		13426	9895	6709	6739	16106	16106					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.613	1	58.613	58.113	59.113	0								0	0	0	0.66264	1	24446	24446		0	0	1		+		13427	9895	6709	6739	16107	16107					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2853576540947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.715	1	58.715	58.215	59.215	0								0	0	0	0.66264	1	24487	24487		0	0	1		+		13428	9895	6709	6739	16108	16108					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.84	1	58.84	58.34	59.34	0								0	0	0	0.66264	1	24539	24539		0	0	1		+		13429	9895	6709	6739	16109	16109					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850219607353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.972	1	58.972	58.472	59.472	0								0	0	0	0.66264	1	24593	24593		0	0	1		+		13430	9895	6709	6739	16110	16110					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.093	1	59.093	58.593	59.593	0								0	0	0	0.66264	1	24643	24643		0	0	1		+		13431	9895	6709	6739	16111	16111					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.22	1	59.22	58.72	59.72	0								0	0	0	0.66264	1	24695	24695		0	0	1		+		13432	9895	6709	6739	16112	16112					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.319	1	59.319	58.819	59.819	0								0	0	0	0.66264	1	24735	24735		0	0	1		+		13433	9895	6709	6739	16113	16113					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.444	1	59.444	58.944	59.944	0								0	0	0	0.66264	1	24786	24786		0	0	1		+		13434	9895	6709	6739	16114	16114					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.586	1	59.586	59.086	60.086	0								0	0	0	0.66264	1	24846	24846		0	0	1		+		13435	9895	6709	6739	16115	16115					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.751	1	59.751	59.251	60.251	0								0	0	0	0.66264	1	24915	24915		0	0	1		+		13436	9895	6709	6739	16116	16116					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.85	1	59.85	59.35	60.35	0								0	0	0	0.66264	1	24955	24955		0	0	1		+		13437	9895	6709	6739	16117	16117					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.966	1	59.966	59.466	60.466	0								0	0	0	0.66264	1	25003	25003		0	0	1		+		13438	9895	6709	6739	16118	16118					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.173	1	60.173	59.673	60.673	0								0	0	0	0.66264	1	25094	25094		0	0	1		+		13439	9895	6709	6739	16119	16119					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.285	1	60.285	59.785	60.785	0								0	0	0	0.66264	1	25143	25143		0	0	1		+		13440	9895	6709	6739	16120	16120					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.529	1	60.529	60.029	61.029	0								0	0	0	0.66264	1	25242	25242		0	0	1		+		13441	9895	6709	6739	16121	16121					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.626	1	60.626	60.126	61.126	0								0	0	0	0.66264	1	25282	25282		0	0	1		+		13442	9895	6709	6739	16122	16122					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.725	1	60.725	60.225	61.225	0								0	0	0	0.66264	1	25322	25322		0	0	1		+		13443	9895	6709	6739	16123	16123					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.074	1	61.074	60.574	61.574	0								0	0	0	0.66264	1	25467	25467		0	0	1		+		13444	9895	6709	6739	16124	16124					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.195	1	61.195	60.695	61.695	0								0	0	0	0.66264	1	25517	25517		0	0	1		+		13445	9895	6709	6739	16125	16125					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.296	1	61.296	60.796	61.796	0								0	0	0	0.66264	1	25558	25558		0	0	1		+		13446	9895	6709	6739	16126	16126					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.416	1	61.416	60.916	61.916	0								0	0	0	0.66264	1	25608	25608		0	0	1		+		13447	9895	6709	6739	16127	16127					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.545	1	61.545	61.045	62.045	0								0	0	0	0.66264	1	25661	25661		0	0	1		+		13448	9895	6709	6739	16128	16128					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.671	1	61.671	61.171	62.171	0								0	0	0	0.66264	1	25713	25713		0	0	1		+		13449	9895	6709	6739	16129	16129					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.768	1	61.768	61.268	62.268	0								0	0	0	0.66264	1	25753	25753		0	0	1		+		13450	9895	6709	6739	16130	16130					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.895	1	61.895	61.395	62.395	0								0	0	0	0.66264	1	25805	25805		0	0	1		+		13451	9895	6709	6739	16131	16131					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.017	1	62.017	61.517	62.517	0								0	0	0	0.66264	1	25856	25856		0	0	1		+		13452	9895	6709	6739	16132	16132					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.14	1	62.14	61.64	62.64	0								0	0	0	0.66264	1	25907	25907		0	0	1		+		13453	9895	6709	6739	16133	16133					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.636	1	62.636	62.136	63.136	0								0	0	0	0.66264	1	26115	26115		0	0	1		+		13454	9895	6709	6739	16134	16134					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.738	1	62.738	62.238	63.238	0								0	0	0	0.66264	1	26157	26157		0	0	1		+		13455	9895	6709	6739	16135	16135					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.858	1	62.858	62.358	63.358	0								0	0	0	0.66264	1	26207	26207		0	0	1		+		13456	9895	6709	6739	16136	16136					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.116	1	63.116	62.616	63.616	0								0	0	0	0.66264	1	26314	26314		0	0	1		+		13457	9895	6709	6739	16137	16137					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.233	1	63.233	62.733	63.733	0								0	0	0	0.66264	1	26363	26363		0	0	1		+		13458	9895	6709	6739	16138	16138					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.424	1	64.424	63.924	64.924	0								0	0	0	0.66264	1	26857	26857		0	0	1		+		13459	9895	6709	6739	16139	16139					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.554	1	64.554	64.054	65.054	0								0	0	0	0.66264	1	26909	26909		0	0	1		+		13460	9895	6709	6739	16140	16140					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.648	1	64.648	64.148	65.148	0								0	0	0	0.66264	1	26947	26947		0	0	1		+		13461	9895	6709	6739	16141	16141					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.742	1	64.742	64.242	65.242	0								0	0	0	0.66264	1	26985	26985		0	0	1		+		13462	9895	6709	6739	16142	16142					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.84	1	64.84	64.34	65.34	0								0	0	0	0.66264	1	27025	27025		0	0	1		+		13463	9895	6709	6739	16143	16143					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.936	1	64.936	64.436	65.436	0								0	0	0	0.66264	1	27063	27063		0	0	1		+		13464	9895	6709	6739	16144	16144					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.035	1	65.035	64.535	65.535	0								0	0	0	0.66264	1	27104	27104		0	0	1		+		13465	9895	6709	6739	16145	16145					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.283	1	65.283	64.783	65.783	0								0	0	0	0.66264	1	27208	27208		0	0	1		+		13466	9895	6709	6739	16146	16146					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.413	1	65.413	64.913	65.913	0								0	0	0	0.66264	1	27261	27261		0	0	1		+		13467	9895	6709	6739	16147	16147					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.591	1	78.591	78.091	79.091	0								0	0	0	0.66264	1	32716	32716		0	0	1		+		13468	9895	6709	6739	16148	16148					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.713	1	78.713	78.213	79.213	0								0	0	0	0.66264	1	32766	32766		0	0	1		+		13469	9895	6709	6739	16149	16149					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.807	1	78.807	78.307	79.307	0								0	0	0	0.66264	1	32805	32805		0	0	1		+		13470	9895	6709	6739	16150	16150					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.931	1	78.931	78.431	79.431	0								0	0	0	0.66264	1	32858	32858		0	0	1		+		13471	9895	6709	6739	16151	16151					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.055	1	79.055	78.555	79.555	0								0	0	0	0.66264	1	32913	32913		0	0	1		+		13472	9895	6709	6739	16152	16152					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.164	1	79.164	78.664	79.664	0								0	0	0	0.66264	1	32961	32961		0	0	1		+		13473	9895	6709	6739	16153	16153					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.268	1	79.268	78.768	79.768	0								0	0	0	0.66264	1	33005	33005		0	0	1		+		13474	9895	6709	6739	16154	16154					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.383	1	96.383	95.883	96.883	0								0	0	0	0.66264	1	40291	40291		0	0	1		+		13475	9895	6709	6739	16155	16155					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.506	1	96.506	96.006	97.006	0								0	0	0	0.66264	1	40341	40341		0	0	1		+		13476	9895	6709	6739	16156	16156					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.63	1	96.63	96.13	97.13	0								0	0	0	0.66264	1	40392	40392		0	0	1		+		13477	9895	6709	6739	16157	16157					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.742	1	96.742	96.242	97.242	0								0	0	0	0.66264	1	40441	40441		0	0	1		+		13478	9895	6709	6739	16158	16158					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2858764529228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.918	1	96.918	96.418	97.418	0								0	0	0	0.66264	1	40517	40517		0	0	1		+		13479	9895	6709	6739	16159	16159					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.169	1	97.169	96.669	97.669	0								0	0	0	0.66264	1	40624	40624		0	0	1		+		13480	9895	6709	6739	16160	16160					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.278	1	97.278	96.778	97.778	0								0	0	0	0.66264	1	40670	40670		0	0	1		+		13481	9895	6709	6739	16161	16161					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.442	1	97.442	96.942	97.942	0								0	0	0	0.66264	1	40738	40738		0	0	1		+		13482	9895	6709	6739	16162	16162					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2856017947197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.565	1	97.565	97.065	98.065	0								0	0	0	0.66264	1	40790	40790		0	0	1		+		13483	9895	6709	6739	16163	16163					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.877	1	97.877	97.377	98.377	0								0	0	0	0.66264	1	40922	40922		0	0	1		+		13484	9895	6709	6739	16164	16164					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.17	1	108.17	107.67	108.67	0								0	0	0	0.66264	1	46552	46552		0	0	1		+		13485	9895	6709	6739	16165	16165					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.11	109.61	110.61	0								0	0	0	0.66264	1	47676	47676		0	0	1		+		13486	9895	6709	6739	16166	16166					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.2	1	110.2	109.7	110.7	0								0	0	0	0.66264	1	47714	47714		0	0	1		+		13487	9895	6709	6739	16167	16167					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.3	1	110.3	109.8	110.8	0								0	0	0	0.66264	1	47749	47749		0	0	1		+		13488	9895	6709	6739	16168	16168					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838928103447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.48	1	110.48	109.98	110.98	0								0	0	0	0.66264	1	47816	47816		0	0	1		+		13489	9895	6709	6739	16169	16169					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.56	1	110.56	110.06	111.06	0								0	0	0	0.66264	1	47852	47852		0	0	1		+		13490	9895	6709	6739	16170	16170					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.66	1	110.66	110.16	111.16	0								0	0	0	0.66264	1	47890	47890		0	0	1		+		13491	9895	6709	6739	16171	16171					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837097048759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.76	1	110.76	110.26	111.26	0								0	0	0	0.66264	1	47928	47928		0	0	1		+		13492	9895	6709	6739	16172	16172					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837097048759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.85	1	110.85	110.35	111.35	0								0	0	0	0.66264	1	47966	47966		0	0	1		+		13493	9895	6709	6739	16173	16173					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837707400322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.94	1	110.94	110.44	111.44	0								0	0	0	0.66264	1	48003	48003		0	0	1		+		13494	9895	6709	6739	16174	16174					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.04	1	111.04	110.54	111.54	0								0	0	0	0.66264	1	48036	48036		0	0	1		+		13495	9895	6709	6739	16175	16175					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.12	1	111.12	110.62	111.62	0								0	0	0	0.66264	1	48070	48070		0	0	1		+		13496	9895	6709	6739	16176	16176					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.21	1	111.21	110.71	111.71	0								0	0	0	0.66264	1	48106	48106		0	0	1		+		13497	9895	6709	6739	16177	16177					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2836181521416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.31	1	111.31	110.81	111.81	0								0	0	0	0.66264	1	48143	48143		0	0	1		+		13498	9895	6709	6739	16178	16178					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2834655642509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.4	1	111.4	110.9	111.9	0								0	0	0	0.66264	1	48182	48182		0	0	1		+		13499	9895	6709	6739	16179	16179					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2855712771416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.39	1	112.39	111.89	112.89	0								0	0	0	0.66264	1	48590	48590		0	0	1		+		13500	9895	6709	6739	16180	16180					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.61	1	112.61	112.11	113.11	0								0	0	0	0.66264	1	48679	48679		0	0	1		+		13501	9895	6709	6739	16181	16181					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2859374880791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.72	1	112.72	112.22	113.22	0								0	0	0	0.66264	1	48721	48721		0	0	1		+		13502	9895	6709	6739	16182	16182					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2864562869072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.88	1	112.88	112.38	113.38	0								0	0	0	0.66264	1	48786	48786		0	0	1		+		13503	9895	6709	6739	16183	16183					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.02	1	113.02	112.52	113.52	0								0	0	0	0.66264	1	48840	48840		0	0	1		+		13504	9895	6709	6739	16184	16184					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.14	1	113.14	112.64	113.64	0								0	0	0	0.66264	1	48888	48888		0	0	1		+		13505	9895	6709	6739	16185	16185					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.27	1	113.27	112.77	113.77	0								0	0	0	0.66264	1	48940	48940		0	0	1		+		13506	9895	6709	6739	16186	16186					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.4	1	113.4	112.9	113.9	0								0	0	0	0.66264	1	48994	48994		0	0	1		+		13507	9895	6709	6739	16187	16187					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2855407595634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.53	1	113.53	113.03	114.03	0								0	0	0	0.66264	1	49044	49044		0	0	1		+		13508	9895	6709	6739	16188	16188					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.66	113.16	114.16	0								0	0	0	0.66264	1	49096	49096		0	0	1		+		13509	9895	6709	6739	16189	16189					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.78	1	113.78	113.28	114.28	0								0	0	0	0.66264	1	49146	49146		0	0	1		+		13510	9895	6709	6739	16190	16190					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.88	1	113.88	113.38	114.38	0								0	0	0	0.66264	1	49185	49185		0	0	1		+		13511	9895	6709	6739	16191	16191					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	113.98	113.48	114.48	0								0	0	0	0.66264	1	49224	49224		0	0	1		+		13512	9895	6709	6739	16192	16192					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.07	1	114.07	113.57	114.57	0								0	0	0	0.66264	1	49263	49263		0	0	1		+		13513	9895	6709	6739	16193	16193					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.17	1	114.17	113.67	114.67	0								0	0	0	0.66264	1	49303	49303		0	0	1		+		13514	9895	6709	6739	16194	16194					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.27	1	114.27	113.77	114.77	0								0	0	0	0.66264	1	49342	49342		0	0	1		+		13515	9895	6709	6739	16195	16195					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.4	1	114.4	113.9	114.9	0								0	0	0	0.66264	1	49396	49396		0	0	1		+		13516	9895	6709	6739	16196	16196					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.53	1	114.53	114.03	115.03	0								0	0	0	0.66264	1	49447	49447		0	0	1		+		13517	9895	6709	6739	16197	16197					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.66	1	114.66	114.16	115.16	0								0	0	0	0.66264	1	49499	49499		0	0	1		+		13518	9895	6709	6739	16198	16198					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.79	1	114.79	114.29	115.29	0								0	0	0	0.66264	1	49551	49551		0	0	1		+		13519	9895	6709	6739	16199	16199					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.92	1	114.92	114.42	115.42	0								0	0	0	0.66264	1	49604	49604		0	0	1		+		13520	9895	6709	6739	16200	16200					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.05	1	115.05	114.55	115.55	0								0	0	0	0.66264	1	49657	49657		0	0	1		+		13521	9895	6709	6739	16201	16201					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.17	1	115.17	114.67	115.67	0								0	0	0	0.66264	1	49708	49708		0	0	1		+		13522	9895	6709	6739	16202	16202					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.3	1	115.3	114.8	115.8	0								0	0	0	0.66264	1	49760	49760		0	0	1		+		13523	9895	6709	6739	16203	16203					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.43	1	115.43	114.93	115.93	0								0	0	0	0.66264	1	49813	49813		0	0	1		+		13524	9895	6709	6739	16204	16204					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.56	1	115.56	115.06	116.06	0								0	0	0	0.66264	1	49866	49866		0	0	1		+		13525	9895	6709	6739	16205	16205					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.68	1	115.68	115.18	116.18	0								0	0	0	0.66264	1	49915	49915		0	0	1		+		13526	9895	6709	6739	16206	16206					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.82	1	115.82	115.32	116.32	0								0	0	0	0.66264	1	49971	49971		0	0	1		+		13527	9895	6709	6739	16207	16207					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.94	1	115.94	115.44	116.44	0								0	0	0	0.66264	1	50022	50022		0	0	1		+		13528	9895	6709	6739	16208	16208					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.06	1	116.06	115.56	116.56	0								0	0	0	0.66264	1	50074	50074		0	0	1		+		13529	9895	6709	6739	16209	16209					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.19	1	116.19	115.69	116.69	0								0	0	0	0.66264	1	50125	50125		0	0	1		+		13530	9895	6709	6739	16210	16210					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.31	1	116.31	115.81	116.81	0								0	0	0	0.66264	1	50176	50176		0	0	1		+		13531	9895	6709	6739	16211	16211					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.44	1	116.44	115.94	116.94	0								0	0	0	0.66264	1	50228	50228		0	0	1		+		13532	9895	6709	6739	16212	16212					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.56	1	116.56	116.06	117.06	0								0	0	0	0.66264	1	50279	50279		0	0	1		+		13533	9895	6709	6739	16213	16213					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.69	1	116.69	116.19	117.19	0								0	0	0	0.66264	1	50330	50330		0	0	1		+		13534	9895	6709	6739	16214	16214					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.82	1	116.82	116.32	117.32	0								0	0	0	0.66264	1	50383	50383		0	0	1		+		13535	9895	6709	6739	16215	16215					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.92	1	116.92	116.42	117.42	0								0	0	0	0.66264	1	50422	50422		0	0	1		+		13536	9895	6709	6739	16216	16216					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.04	1	117.04	116.54	117.54	0								0	0	0	0.66264	1	50472	50472		0	0	1		+		13537	9895	6709	6739	16217	16217					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.15	1	117.15	116.65	117.65	0								0	0	0	0.66264	1	50514	50514		0	0	1		+		13538	9895	6709	6739	16218	16218					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.27	1	117.27	116.77	117.77	0								0	0	0	0.66264	1	50564	50564		0	0	1		+		13539	9895	6709	6739	16219	16219					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.4	1	117.4	116.9	117.9	0								0	0	0	0.66264	1	50616	50616		0	0	1		+		13540	9895	6709	6739	16220	16220					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.52	1	117.52	117.02	118.02	0								0	0	0	0.66264	1	50667	50667		0	0	1		+		13541	9895	6709	6739	16221	16221					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.62	1	117.62	117.12	118.12	0								0	0	0	0.66264	1	50707	50707		0	0	1		+		13542	9895	6709	6739	16222	16222					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.74	1	117.74	117.24	118.24	0								0	0	0	0.66264	1	50755	50755		0	0	1		+		13543	9895	6709	6739	16223	16223					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.84	1	117.84	117.34	118.34	0								0	0	0	0.66264	1	50794	50794		0	0	1		+		13544	9895	6709	6739	16224	16224					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.94	1	117.94	117.44	118.44	0								0	0	0	0.66264	1	50835	50835		0	0	1		+		13545	9895	6709	6739	16225	16225					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.16	1	118.16	117.66	118.66	0								0	0	0	0.66264	1	50925	50925		0	0	1		+		13546	9895	6709	6739	16226	16226					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.26	1	118.26	117.76	118.76	0								0	0	0	0.66264	1	50963	50963		0	0	1		+		13547	9895	6709	6739	16227	16227					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.37	1	118.37	117.87	118.87	0								0	0	0	0.66264	1	51006	51006		0	0	1		+		13548	9895	6709	6739	16228	16228					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.49	1	118.49	117.99	118.99	0								0	0	0	0.66264	1	51057	51057		0	0	1		+		13549	9895	6709	6739	16229	16229					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.59	1	118.59	118.09	119.09	0								0	0	0	0.66264	1	51097	51097		0	0	1		+		13550	9895	6709	6739	16230	16230					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.72	1	118.72	118.22	119.22	0								0	0	0	0.66264	1	51149	51149		0	0	1		+		13551	9895	6709	6739	16231	16231					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.85	1	118.85	118.35	119.35	0								0	0	0	0.66264	1	51200	51200		0	0	1		+		13552	9895	6709	6739	16232	16232					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.98	1	118.98	118.48	119.48	0								0	0	0	0.66264	1	51253	51253		0	0	1		+		13553	9895	6709	6739	16233	16233					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.11	1	119.11	118.61	119.61	0								0	0	0	0.66264	1	51304	51304		0	0	1		+		13554	9895	6709	6739	16234	16234					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.25	1	119.25	118.75	119.75	0								0	0	0	0.66264	1	51359	51359		0	0	1		+		13555	9895	6709	6739	16235	16235					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.36	1	119.36	118.86	119.86	0								0	0	0	0.66264	1	51406	51406		0	0	1		+		13556	9895	6709	6739	16236	16236					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.49	1	119.49	118.99	119.99	0								0	0	0	0.66264	1	51458	51458		0	0	1		+		13557	9895	6709	6739	16237	16237					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.59	1	119.59	119.09	120.09	0								0	0	0	0.66264	1	51497	51497		0	0	1		+		13558	9895	6709	6739	16238	16238					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.72	1	119.72	119.22	120.22	0								0	0	0	0.66264	1	51549	51549		0	0	1		+		13559	9895	6709	6739	16239	16239					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.81	1	119.81	119.31	120.31	0								0	0	0	0.66264	1	51588	51588		0	0	1		+		13560	9895	6709	6739	16240	16240					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.91	1	119.91	119.41	120.41	0								0	0	0	0.66264	1	51628	51628		0	0	1		+		13561	9895	6709	6739	16241	16241					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.11848	1	0.27692	-0.22308	0.77692	0.15844								0	0	0	0.66264	1	49	49		0	0	1		+		13562	9895	6709	6739	16242	16242					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.23597	1	0.39441	-0.10559	0.89441	0.15844								0	0	0	0.66264	1	97	97		0	0	1		+		13563	9895	6709	6739	16243	16243					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.33452	1	0.49296	-0.0070368	0.99296	0.15844								0	0	0	0.66264	1	138	138		0	0	1		+		13564	9895	6709	6739	16244	16244					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.43189	1	0.59033	0.09033	1.0903	0.15844								0	0	0	0.66264	1	177	177		0	0	1		+		13565	9895	6709	6739	16245	16245					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.52677	1	0.68522	0.18522	1.1852	0.15844								0	0	0	0.66264	1	216	216		0	0	1		+		13566	9895	6709	6739	16246	16246					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.82328	1	0.97031	0.47031	1.4703	0.14703								0	0	0	0.66264	1	339	339		0	0	1		+		13567	9895	6709	6739	16247	16247					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.93192	1	1.0789	0.57895	1.5789	0.14703								0	0	0	0.66264	1	384	384		0	0	1		+		13568	9895	6709	6739	16248	16248					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0389	1	1.1859	0.68594	1.6859	0.14703								0	0	0	0.66264	1	428	428		0	0	1		+		13569	9895	6709	6739	16249	16249					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2262	1	1.3732	0.87321	1.8732	0.14703								0	0	0	0.66264	1	506	506		0	0	1		+		13570	9895	6709	6739	16250	16250					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3205	1	1.4675	0.96751	1.9675	0.14703								0	0	0	0.66264	1	545	545		0	0	1		+		13571	9895	6709	6739	16251	16251					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4172	1	1.5642	1.0642	2.0642	0.14703								0	0	0	0.66264	1	585	585		0	0	1		+		13572	9895	6709	6739	16252	16252					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6143	1	1.7614	1.2614	2.2614	0.14703								0	0	0	0.66264	1	665	665		0	0	1		+		13573	9895	6709	6739	16253	16253					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7087	1	1.8558	1.3558	2.3558	0.14703								0	0	0	0.66264	1	704	704		0	0	1		+		13574	9895	6709	6739	16254	16254					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.811	1	1.958	1.458	2.458	0.14703								0	0	0	0.66264	1	746	746		0	0	1		+		13575	9895	6709	6739	16255	16255					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9163	1	2.0633	1.5633	2.5633	0.14703								0	0	0	0.66264	1	789	789		0	0	1		+		13576	9895	6709	6739	16256	16256					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0146	1	2.1372	1.6372	2.6372	0.12256								0	0	0	0.66264	1	828	828		0	0	1		+		13577	9895	6709	6739	16257	16257					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1177	1	2.2403	1.7403	2.7403	0.12256								0	0	0	0.66264	1	871	871		0	0	1		+		13578	9895	6709	6739	16258	16258					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2241	1	2.3466	1.8466	2.8466	0.12256								0	0	0	0.66264	1	916	916		0	0	1		+		13579	9895	6709	6739	16259	16259					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4286	1	2.5511	2.0511	3.0511	0.12256								0	0	0	0.66264	1	1001	1001		0	0	1		+		13580	9895	6709	6739	16260	16260					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6384	1	2.761	2.261	3.261	0.12256								0	0	0	0.66264	1	1088	1088		0	0	1		+		13581	9895	6709	6739	16261	16261					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7304	1	2.8529	2.3529	3.3529	0.12256								0	0	0	0.66264	1	1126	1126		0	0	1		+		13582	9895	6709	6739	16262	16262					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.833	1	2.9556	2.4556	3.4556	0.12256								0	0	0	0.66264	1	1169	1169		0	0	1		+		13583	9895	6709	6739	16263	16263					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9238	1	3.0464	2.5464	3.5464	0.12256								0	0	0	0.66264	1	1206	1206		0	0	1		+		13584	9895	6709	6739	16264	16264					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0164	1	3.139	2.639	3.639	0.12256								0	0	0	0.66264	1	1245	1245		0	0	1		+		13585	9895	6709	6739	16265	16265					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1177	1	3.2403	2.7403	3.7403	0.12256								0	0	0	0.66264	1	1287	1287		0	0	1		+		13586	9895	6709	6739	16266	16266					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.225	1	3.327	2.827	3.827	0.10199								0	0	0	0.66264	1	1331	1331		0	0	1		+		13587	9895	6709	6739	16267	16267					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.324	1	3.426	2.926	3.926	0.10199								0	0	0	0.66264	1	1373	1373		0	0	1		+		13588	9895	6709	6739	16268	16268					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4273	1	3.5293	3.0293	4.0293	0.10199								0	0	0	0.66264	1	1415	1415		0	0	1		+		13589	9895	6709	6739	16269	16269					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.516	1	3.618	3.118	4.118	0.10199								0	0	0	0.66264	1	1451	1451		0	0	1		+		13590	9895	6709	6739	16270	16270					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6075	1	3.7094	3.2094	4.2094	0.10199								0	0	0	0.66264	1	1488	1488		0	0	1		+		13591	9895	6709	6739	16271	16271					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6988	1	3.8008	3.3008	4.3008	0.10199								0	0	0	0.66264	1	1526	1526		0	0	1		+		13592	9895	6709	6739	16272	16272					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8015	1	3.9035	3.4035	4.4035	0.10199								0	0	0	0.66264	1	1569	1569		0	0	1		+		13593	9895	6709	6739	16273	16273					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8907	1	3.9927	3.4927	4.4927	0.10199								0	0	0	0.66264	1	1606	1606		0	0	1		+		13594	9895	6709	6739	16274	16274					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.988	1	4.0899	3.5899	4.5899	0.10199								0	0	0	0.66264	1	1647	1647		0	0	1		+		13595	9895	6709	6739	16275	16275					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1002	1	4.2022	3.7022	4.7022	0.10199								0	0	0	0.66264	1	1693	1693		0	0	1		+		13596	9895	6709	6739	16276	16276					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1996	1	4.3016	3.8016	4.8016	0.10199								0	0	0	0.66264	1	1735	1735		0	0	1		+		13597	9895	6709	6739	16277	16277					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3932	1	4.4812	3.9812	4.9812	0.08803								0	0	0	0.66264	1	1816	1816		0	0	1		+		13598	9895	6709	6739	16278	16278					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4909	1	4.579	4.079	5.079	0.08803								0	0	0	0.66264	1	1857	1857		0	0	1		+		13599	9895	6709	6739	16279	16279					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6054	1	4.6935	4.1935	5.1935	0.08803								0	0	0	0.66264	1	1903	1903		0	0	1		+		13600	9895	6709	6739	16280	16280					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6976	1	4.7856	4.2856	5.2856	0.08803								0	0	0	0.66264	1	1941	1941		0	0	1		+		13601	9895	6709	6739	16281	16281					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8	1	4.8881	4.3881	5.3881	0.08803								0	0	0	0.66264	1	1984	1984		0	0	1		+		13602	9895	6709	6739	16282	16282					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.895	1	4.983	4.483	5.483	0.08803								0	0	0	0.66264	1	2023	2023		0	0	1		+		13603	9895	6709	6739	16283	16283					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9954	1	5.0835	4.5835	5.5835	0.08803								0	0	0	0.66264	1	2065	2065		0	0	1		+		13604	9895	6709	6739	16284	16284					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0966	1	5.1846	4.6846	5.6846	0.08803								0	0	0	0.66264	1	2106	2106		0	0	1		+		13605	9895	6709	6739	16285	16285					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1943	1	5.2823	4.7823	5.7823	0.08803								0	0	0	0.66264	1	2146	2146		0	0	1		+		13606	9895	6709	6739	16286	16286					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2898	1	5.3778	4.8778	5.8778	0.08803								0	0	0	0.66264	1	2185	2185		0	0	1		+		13607	9895	6709	6739	16287	16287					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3821	1	5.4701	4.9701	5.9701	0.08803								0	0	0	0.66264	1	2223	2223		0	0	1		+		13608	9895	6709	6739	16288	16288					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4694	1	5.5575	5.0575	6.0575	0.08803								0	0	0	0.66264	1	2260	2260		0	0	1		+		13609	9895	6709	6739	16289	16289					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5714	1	5.6594	5.1594	6.1594	0.08803								0	0	0	0.66264	1	2302	2302		0	0	1		+		13610	9895	6709	6739	16290	16290					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7763	1	5.8562	5.3562	6.3562	0.079923								0	0	0	0.66264	1	2387	2387		0	0	1		+		13611	9895	6709	6739	16291	16291					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8706	1	5.9505	5.4505	6.4505	0.079923								0	0	0	0.66264	1	2427	2427		0	0	1		+		13612	9895	6709	6739	16292	16292					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9768	1	6.0567	5.5567	6.5567	0.079923								0	0	0	0.66264	1	2471	2471		0	0	1		+		13613	9895	6709	6739	16293	16293					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1799	1	6.2598	5.7598	6.7598	0.079923								0	0	0	0.66264	1	2555	2555		0	0	1		+		13614	9895	6709	6739	16294	16294					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.271	1	6.3509	5.8509	6.8509	0.079923								0	0	0	0.66264	1	2592	2592		0	0	1		+		13615	9895	6709	6739	16295	16295					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3629	1	6.4428	5.9428	6.9428	0.079923								0	0	0	0.66264	1	2630	2630		0	0	1		+		13616	9895	6709	6739	16296	16296					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4596	1	6.5395	6.0395	7.0395	0.079923								0	0	0	0.66264	1	2670	2670		0	0	1		+		13617	9895	6709	6739	16297	16297					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5535	1	6.6334	6.1334	7.1334	0.079923								0	0	0	0.66264	1	2709	2709		0	0	1		+		13618	9895	6709	6739	16298	16298					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.649	1	6.7289	6.2289	7.2289	0.079923								0	0	0	0.66264	1	2749	2749		0	0	1		+		13619	9895	6709	6739	16299	16299					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7516	1	6.8315	6.3315	7.3315	0.079923								0	0	0	0.66264	1	2792	2792		0	0	1		+		13620	9895	6709	6739	16300	16300					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8532	1	6.9296	6.4296	7.4296	0.07632								0	0	0	0.66264	1	2834	2834		0	0	1		+		13621	9895	6709	6739	16301	16301					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9573	1	7.0336	6.5336	7.5336	0.07632								0	0	0	0.66264	1	2877	2877		0	0	1		+		13622	9895	6709	6739	16302	16302					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1703	1	7.2466	6.7466	7.7466	0.07632								0	0	0	0.66264	1	2966	2966		0	0	1		+		13623	9895	6709	6739	16303	16303					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2664	1	7.3428	6.8428	7.8428	0.07632								0	0	0	0.66264	1	3005	3005		0	0	1		+		13624	9895	6709	6739	16304	16304					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3664	1	7.4427	6.9427	7.9427	0.07632								0	0	0	0.66264	1	3047	3047		0	0	1		+		13625	9895	6709	6739	16305	16305					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5537	1	7.63	7.13	8.13	0.07632								0	0	0	0.66264	1	3125	3125		0	0	1		+		13626	9895	6709	6739	16306	16306					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6572	1	7.7335	7.2335	8.2335	0.07632								0	0	0	0.66264	1	3168	3168		0	0	1		+		13627	9895	6709	6739	16307	16307					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7548	1	7.8311	7.3311	8.3311	0.07632								0	0	0	0.66264	1	3208	3208		0	0	1		+		13628	9895	6709	6739	16308	16308					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8512	1	7.9275	7.4275	8.4275	0.07632								0	0	0	0.66264	1	3248	3248		0	0	1		+		13629	9895	6709	6739	16309	16309					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9442	1	8.0205	7.5205	8.5205	0.07632								0	0	0	0.66264	1	3287	3287		0	0	1		+		13630	9895	6709	6739	16310	16310					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0448	1	8.1211	7.6211	8.6211	0.07632								0	0	0	0.66264	1	3330	3330		0	0	1		+		13631	9895	6709	6739	16311	16311					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1345	1	8.2109	7.7109	8.7109	0.07632								0	0	0	0.66264	1	3367	3367		0	0	1		+		13632	9895	6709	6739	16312	16312					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3253	1	8.4016	7.9016	8.9016	0.07632								0	0	0	0.66264	1	3447	3447		0	0	1		+		13633	9895	6709	6739	16313	16313					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4222	1	8.4985	7.9985	8.9985	0.07632								0	0	0	0.66264	1	3487	3487		0	0	1		+		13634	9895	6709	6739	16314	16314					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5151	1	8.5914	8.0914	9.0914	0.07632								0	0	0	0.66264	1	3525	3525		0	0	1		+		13635	9895	6709	6739	16315	16315					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7108	1	8.7871	8.2871	9.2871	0.07632								0	0	0	0.66264	1	3608	3608		0	0	1		+		13636	9895	6709	6739	16316	16316					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9038	1	8.9801	8.4801	9.4801	0.07632								0	0	0	0.66264	1	3687	3687		0	0	1		+		13637	9895	6709	6739	16317	16317					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1131	1	9.1894	8.6894	9.6894	0.07632								0	0	0	0.66264	1	3775	3775		0	0	1		+		13638	9895	6709	6739	16318	16318					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2061	1	9.2828	8.7828	9.7828	0.07668								0	0	0	0.66264	1	3814	3814		0	0	1		+		13639	9895	6709	6739	16319	16319					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2967	1	9.3746	8.8746	9.8746	0.077971								0	0	0	0.66264	1	3852	3852		0	0	1		+		13640	9895	6709	6739	16320	16320					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4901	1	9.5681	9.0681	10.068	0.077971								0	0	0	0.66264	1	3933	3933		0	0	1		+		13641	9895	6709	6739	16321	16321					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2829162478447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.287	1	35.586	35.086	36.086	0.29942								0	0	0	0.66264	1	14825	14825		0	0	1		+		13642	9895	6709	6739	16322	16322					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.465	1	35.764	35.264	36.264	0.29942								0	0	0	0.66264	1	14902	14902		0	0	1		+		13643	9895	6709	6739	16323	16323					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.578	1	35.877	35.377	36.377	0.29942								0	0	0	0.66264	1	14951	14951		0	0	1		+		13644	9895	6709	6739	16324	16324					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2852050662041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.224	1	58.547	58.047	59.047	0.32298								0	0	0	0.66264	1	24405	24405		0	0	1		+		13645	9895	6709	6739	16325	16325					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2836181521416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.691	1	59.016	58.516	59.516	0.32553								0	0	0	0.66264	1	24597	24597		0	0	1		+		13646	9895	6709	6739	16326	16326					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.788	1	59.114	58.614	59.614	0.32553								0	0	0	0.66264	1	24637	24637		0	0	1		+		13647	9895	6709	6739	16327	16327					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.876	1	71.2	70.7	71.7	0.32359								0	0	0	0.66264	1	29668	29668		0	0	1		+		13648	9895	6709	6739	16328	16328					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.97	1	71.294	70.794	71.794	0.32359								0	0	0	0.66264	1	29706	29706		0	0	1		+		13649	9895	6709	6739	16329	16329					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.069	1	71.393	70.893	71.893	0.32359								0	0	0	0.66264	1	29747	29747		0	0	1		+		13650	9895	6709	6739	16330	16330					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.197	1	71.521	71.021	72.021	0.32359								0	0	0	0.66264	1	29799	29799		0	0	1		+		13651	9895	6709	6739	16331	16331					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.327	1	71.65	71.15	72.15	0.32359								0	0	0	0.66264	1	29852	29852		0	0	1		+		13652	9895	6709	6739	16332	16332					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.458	1	71.781	71.281	72.281	0.32359								0	0	0	0.66264	1	29904	29904		0	0	1		+		13653	9895	6709	6739	16333	16333					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.585	1	71.909	71.409	72.409	0.32359								0	0	0	0.66264	1	29956	29956		0	0	1		+		13654	9895	6709	6739	16334	16334					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.707	1	72.031	71.531	72.531	0.32359								0	0	0	0.66264	1	30007	30007		0	0	1		+		13655	9895	6709	6739	16335	16335					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.835	1	72.16	71.66	72.66	0.32494								0	0	0	0.66264	1	30060	30060		0	0	1		+		13656	9895	6709	6739	16336	16336					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.961	1	72.286	71.786	72.786	0.32494								0	0	0	0.66264	1	30111	30111		0	0	1		+		13657	9895	6709	6739	16337	16337					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.06	1	72.385	71.885	72.885	0.32494								0	0	0	0.66264	1	30151	30151		0	0	1		+		13658	9895	6709	6739	16338	16338					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.185	1	72.51	72.01	73.01	0.32494								0	0	0	0.66264	1	30202	30202		0	0	1		+		13659	9895	6709	6739	16339	16339					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.311	1	72.636	72.136	73.136	0.32494								0	0	0	0.66264	1	30254	30254		0	0	1		+		13660	9895	6709	6739	16340	16340					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.435	1	72.76	72.26	73.26	0.32494								0	0	0	0.66264	1	30306	30306		0	0	1		+		13661	9895	6709	6739	16341	16341					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.556	1	72.881	72.381	73.381	0.32494								0	0	0	0.66264	1	30357	30357		0	0	1		+		13662	9895	6709	6739	16342	16342					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.789	1	73.114	72.614	73.614	0.32494								0	0	0	0.66264	1	30451	30451		0	0	1		+		13663	9895	6709	6739	16343	16343					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.913	1	73.238	72.738	73.738	0.32494								0	0	0	0.66264	1	30501	30501		0	0	1		+		13664	9895	6709	6739	16344	16344					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.004	1	73.329	72.829	73.829	0.32494								0	0	0	0.66264	1	30538	30538		0	0	1		+		13665	9895	6709	6739	16345	16345					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.106	1	73.431	72.931	73.931	0.32494								0	0	0	0.66264	1	30580	30580		0	0	1		+		13666	9895	6709	6739	16346	16346					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.229	1	73.554	73.054	74.054	0.32494								0	0	0	0.66264	1	30635	30635		0	0	1		+		13667	9895	6709	6739	16347	16347					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.338	1	73.662	73.162	74.162	0.32494								0	0	0	0.66264	1	30684	30684		0	0	1		+		13668	9895	6709	6739	16348	16348					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.455	1	73.78	73.28	74.28	0.32494								0	0	0	0.66264	1	30734	30734		0	0	1		+		13669	9895	6709	6739	16349	16349					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.586	1	73.911	73.411	74.411	0.32494								0	0	0	0.66264	1	30787	30787		0	0	1		+		13670	9895	6709	6739	16350	16350					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.706	1	74.031	73.531	74.531	0.32494								0	0	0	0.66264	1	30835	30835		0	0	1		+		13671	9895	6709	6739	16351	16351					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.802	1	74.127	73.627	74.627	0.32494								0	0	0	0.66264	1	30874	30874		0	0	1		+		13672	9895	6709	6739	16352	16352					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.029	1	74.354	73.854	74.854	0.32494								0	0	0	0.66264	1	30967	30967		0	0	1		+		13673	9895	6709	6739	16353	16353					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.126	1	74.451	73.951	74.951	0.32494								0	0	0	0.66264	1	31007	31007		0	0	1		+		13674	9895	6709	6739	16354	16354					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.255	1	74.579	74.079	75.079	0.32464								0	0	0	0.66264	1	31060	31060		0	0	1		+		13675	9895	6709	6739	16355	16355					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.381	1	74.706	74.206	75.206	0.32464								0	0	0	0.66264	1	31111	31111		0	0	1		+		13676	9895	6709	6739	16356	16356					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.507	1	74.832	74.332	75.332	0.32464								0	0	0	0.66264	1	31164	31164		0	0	1		+		13677	9895	6709	6739	16357	16357					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.629	1	74.953	74.453	75.453	0.32464								0	0	0	0.66264	1	31215	31215		0	0	1		+		13678	9895	6709	6739	16358	16358					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2863342165947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.276	1	96.381	95.881	96.881	0.105								0	0	0	0.66264	1	40288	40288		0	0	1		+		13679	9895	6709	6739	16359	16359					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.464	1	96.569	96.069	97.069	0.105								0	0	0	0.66264	1	40365	40365		0	0	1		+		13680	9895	6709	6739	16360	16360					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2853576540947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.72	1	96.825	96.325	97.325	0.105								0	0	0	0.66264	1	40474	40474		0	0	1		+		13681	9895	6709	6739	16361	16361					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2864257693291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.897	1	97.002	96.502	97.502	0.105								0	0	0	0.66264	1	40547	40547		0	0	1		+		13682	9895	6709	6739	16362	16362					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.04	1	97.145	96.645	97.645	0.105								0	0	0	0.66264	1	40606	40606		0	0	1		+		13683	9895	6709	6739	16363	16363					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.226	1	97.317	96.817	97.817	0.090881								0	0	0	0.66264	1	40684	40684		0	0	1		+		13684	9895	6709	6739	16364	16364					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2862426638603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.347	1	97.437	96.937	97.937	0.090881								0	0	0	0.66264	1	40733	40733		0	0	1		+		13685	9895	6709	6739	16365	16365					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2860290408134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.08	1	103.14	102.64	103.64	0.062805								0	0	0	0.66264	1	43198	43198		0	0	1		+		13686	9895	6709	6739	16366	16366					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.99	1	107.05	106.55	107.55	0.052452								0	0	0	0.66264	1	45690	45690		0	0	1		+		13687	9895	6709	6739	16367	16367					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.13	1	107.18	106.68	107.68	0.052452								0	0	0	0.66264	1	45768	45768		0	0	1		+		13688	9895	6709	6739	16368	16368					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.616	1	36.891	36.391	37.391	1.2746								0	0	0	0.66264	1	14952	14952		0	0	1		+		13689	9895	6709	6739	16369	16369					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2836791872978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.712	1	36.987	36.487	37.487	1.2746								0	0	0	0.66264	1	14992	14992		0	0	1		+		13690	9895	6709	6739	16370	16370					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.806	1	37.081	36.581	37.581	1.275								0	0	0	0.66264	1	15032	15032		0	0	1		+		13691	9895	6709	6739	16371	16371					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.913	1	37.189	36.689	37.689	1.2762								0	0	0	0.66264	1	15077	15077		0	0	1		+		13692	9895	6709	6739	16372	16372					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.006	1	37.282	36.782	37.782	1.2762								0	0	0	0.66264	1	15116	15116		0	0	1		+		13693	9895	6709	6739	16373	16373					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.391	1	37.668	37.168	38.168	1.2762								0	0	0	0.66264	1	15277	15277		0	0	1		+		13694	9895	6709	6739	16374	16374					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.516	1	37.792	37.292	38.292	1.2762								0	0	0	0.66264	1	15329	15329		0	0	1		+		13695	9895	6709	6739	16375	16375					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.618	1	37.894	37.394	38.394	1.2762								0	0	0	0.66264	1	15371	15371		0	0	1		+		13696	9895	6709	6739	16376	16376					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.723	1	37.999	37.499	38.499	1.2762								0	0	0	0.66264	1	15414	15414		0	0	1		+		13697	9895	6709	6739	16377	16377					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2833740115166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.94	1	38.216	37.716	38.716	1.2762								0	0	0	0.66264	1	15503	15503		0	0	1		+		13698	9895	6709	6739	16378	16378					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2830993533134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.121	1	38.405	37.905	38.905	1.284								0	0	0	0.66264	1	15583	15583		0	0	1		+		13699	9895	6709	6739	16379	16379					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.211	1	38.496	37.996	38.996	1.284								0	0	0	0.66264	1	15622	15622		0	0	1		+		13700	9895	6709	6739	16380	16380					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.849	1	68.238	67.738	68.738	1.3888								0	0	0	0.66264	1	28043	28043		0	0	1		+		13701	9895	6709	6739	16381	16381					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.954	1	68.343	67.843	68.843	1.3888								0	0	0	0.66264	1	28085	28085		0	0	1		+		13702	9895	6709	6739	16382	16382					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.133	1	68.521	68.021	69.021	1.3888								0	0	0	0.66264	1	28162	28162		0	0	1		+		13703	9895	6709	6739	16383	16383					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.251	1	68.64	68.14	69.14	1.3888								0	0	0	0.66264	1	28214	28214		0	0	1		+		13704	9895	6709	6739	16384	16384					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.374	1	68.752	68.252	69.252	1.3778								0	0	0	0.66264	1	28265	28265		0	0	1		+		13705	9895	6709	6739	16385	16385					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.8	1	69.178	68.678	69.678	1.3778								0	0	0	0.66264	1	28448	28448		0	0	1		+		13706	9895	6709	6739	16386	16386					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.929	1	69.307	68.807	69.807	1.3778								0	0	0	0.66264	1	28503	28503		0	0	1		+		13707	9895	6709	6739	16387	16387					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.052	1	69.43	68.93	69.93	1.3778								0	0	0	0.66264	1	28554	28554		0	0	1		+		13708	9895	6709	6739	16388	16388					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.173	1	69.551	69.051	70.051	1.3778								0	0	0	0.66264	1	28605	28605		0	0	1		+		13709	9895	6709	6739	16389	16389					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.291	1	69.668	69.168	70.168	1.3778								0	0	0	0.66264	1	28655	28655		0	0	1		+		13710	9895	6709	6739	16390	16390					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855712771416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.405	1	69.782	69.282	70.282	1.3778								0	0	0	0.66264	1	28704	28704		0	0	1		+		13711	9895	6709	6739	16391	16391					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.566	1	69.931	69.431	70.431	1.3657								0	0	0	0.66264	1	28773	28773		0	0	1		+		13712	9895	6709	6739	16392	16392					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.693	1	70.059	69.559	70.559	1.3657								0	0	0	0.66264	1	28826	28826		0	0	1		+		13713	9895	6709	6739	16393	16393					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.823	1	70.188	69.688	70.688	1.3657								0	0	0	0.66264	1	28879	28879		0	0	1		+		13714	9895	6709	6739	16394	16394					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.951	1	70.317	69.817	70.817	1.3657								0	0	0	0.66264	1	28930	28930		0	0	1		+		13715	9895	6709	6739	16395	16395					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.084	1	70.45	69.95	70.95	1.3657								0	0	0	0.66264	1	28986	28986		0	0	1		+		13716	9895	6709	6739	16396	16396					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.196	1	70.561	70.061	71.061	1.3657								0	0	0	0.66264	1	29037	29037		0	0	1		+		13717	9895	6709	6739	16397	16397					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.312	1	70.678	70.178	71.178	1.3657								0	0	0	0.66264	1	29089	29089		0	0	1		+		13718	9895	6709	6739	16398	16398					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.421	1	70.787	70.287	71.287	1.3657								0	0	0	0.66264	1	29139	29139		0	0	1		+		13719	9895	6709	6739	16399	16399					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.547	1	70.913	70.413	71.413	1.3657								0	0	0	0.66264	1	29192	29192		0	0	1		+		13720	9895	6709	6739	16400	16400					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.671	1	71.036	70.536	71.536	1.3657								0	0	0	0.66264	1	29244	29244		0	0	1		+		13721	9895	6709	6739	16401	16401					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.8	1	71.153	70.653	71.653	1.3536								0	0	0	0.66264	1	29297	29297		0	0	1		+		13722	9895	6709	6739	16402	16402					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852355837822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.919	1	71.273	70.773	71.773	1.3536								0	0	0	0.66264	1	29347	29347		0	0	1		+		13723	9895	6709	6739	16403	16403					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.044	1	71.398	70.898	71.898	1.3536								0	0	0	0.66264	1	29399	29399		0	0	1		+		13724	9895	6709	6739	16404	16404					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.166	1	71.519	71.019	72.019	1.3536								0	0	0	0.66264	1	29450	29450		0	0	1		+		13725	9895	6709	6739	16405	16405					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.29	1	71.644	71.144	72.144	1.3536								0	0	0	0.66264	1	29501	29501		0	0	1		+		13726	9895	6709	6739	16406	16406					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.415	1	71.768	71.268	72.268	1.3536								0	0	0	0.66264	1	29552	29552		0	0	1		+		13727	9895	6709	6739	16407	16407					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.512	1	71.866	71.366	72.366	1.3536								0	0	0	0.66264	1	29590	29590		0	0	1		+		13728	9895	6709	6739	16408	16408					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.616	1	71.969	71.469	72.469	1.3536								0	0	0	0.66264	1	29632	29632		0	0	1		+		13729	9895	6709	6739	16409	16409					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853576540947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.752	1	72.106	71.606	72.606	1.3536								0	0	0	0.66264	1	29688	29688		0	0	1		+		13730	9895	6709	6739	16410	16410					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856017947197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.9	1	72.247	71.747	72.747	1.3474								0	0	0	0.66264	1	29750	29750		0	0	1		+		13731	9895	6709	6739	16411	16411					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.024	1	72.365	71.865	72.865	1.3415								0	0	0	0.66264	1	29802	29802		0	0	1		+		13732	9895	6709	6739	16412	16412					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.141	1	72.483	71.983	72.983	1.3415								0	0	0	0.66264	1	29854	29854		0	0	1		+		13733	9895	6709	6739	16413	16413					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.293	1	72.634	72.134	73.134	1.3415								0	0	0	0.66264	1	29921	29921		0	0	1		+		13734	9895	6709	6739	16414	16414					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.435	1	72.777	72.277	73.277	1.3415								0	0	0	0.66264	1	29982	29982		0	0	1		+		13735	9895	6709	6739	16415	16415					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.56	1	72.902	72.402	73.402	1.3415								0	0	0	0.66264	1	30034	30034		0	0	1		+		13736	9895	6709	6739	16416	16416					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.718	1	73.06	72.56	73.56	1.3415								0	0	0	0.66264	1	30100	30100		0	0	1		+		13737	9895	6709	6739	16417	16417					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.84	1	73.182	72.682	73.682	1.3415								0	0	0	0.66264	1	30152	30152		0	0	1		+		13738	9895	6709	6739	16418	16418					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.964	1	73.306	72.806	73.806	1.3415								0	0	0	0.66264	1	30203	30203		0	0	1		+		13739	9895	6709	6739	16419	16419					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.09	1	73.431	72.931	73.931	1.3415								0	0	0	0.66264	1	30255	30255		0	0	1		+		13740	9895	6709	6739	16420	16420					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.211	1	73.54	73.04	74.04	1.3297								0	0	0	0.66264	1	30305	30305		0	0	1		+		13741	9895	6709	6739	16421	16421					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.308	1	73.638	73.138	74.138	1.3297								0	0	0	0.66264	1	30346	30346		0	0	1		+		13742	9895	6709	6739	16422	16422					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852050662041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.439	1	73.769	73.269	74.269	1.3297								0	0	0	0.66264	1	30403	30403		0	0	1		+		13743	9895	6709	6739	16423	16423					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.558	1	73.887	73.387	74.387	1.3297								0	0	0	0.66264	1	30454	30454		0	0	1		+		13744	9895	6709	6739	16424	16424					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852661013603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.678	1	74.007	73.507	74.507	1.3297								0	0	0	0.66264	1	30505	30505		0	0	1		+		13745	9895	6709	6739	16425	16425					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.809	1	74.138	73.638	74.638	1.3297								0	0	0	0.66264	1	30558	30558		0	0	1		+		13746	9895	6709	6739	16426	16426					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.926	1	74.255	73.755	74.755	1.3297								0	0	0	0.66264	1	30607	30607		0	0	1		+		13747	9895	6709	6739	16427	16427					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.047	1	74.377	73.877	74.877	1.3297								0	0	0	0.66264	1	30658	30658		0	0	1		+		13748	9895	6709	6739	16428	16428					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.175	1	74.504	74.004	75.004	1.3297								0	0	0	0.66264	1	30711	30711		0	0	1		+		13749	9895	6709	6739	16429	16429					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2869750857353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.547	1	88.639	88.139	89.139	1.0918								0	0	0	0.66264	1	36923	36923		0	0	1		+		13750	9895	6709	6739	16430	16430					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2862121462822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.763	1	88.854	88.354	89.354	1.0918								0	0	0	0.66264	1	37012	37012		0	0	1		+		13751	9895	6709	6739	16431	16431					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2863342165947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.96	1	89.016	88.516	89.516	1.0562								0	0	0	0.66264	1	37093	37093		0	0	1		+		13752	9895	6709	6739	16432	16432					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856628298759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.087	1	89.143	88.643	89.643	1.0562								0	0	0	0.66264	1	37145	37145		0	0	1		+		13753	9895	6709	6739	16433	16433					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854186892509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.217	1	89.273	88.773	89.773	1.0562								0	0	0	0.66264	1	37198	37198		0	0	1		+		13754	9895	6709	6739	16434	16434					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2871276736259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.336	1	89.392	88.892	89.892	1.0562								0	0	0	0.66264	1	37246	37246		0	0	1		+		13755	9895	6709	6739	16435	16435					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854492068291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.47	1	89.526	89.026	90.026	1.0562								0	0	0	0.66264	1	37300	37300		0	0	1		+		13756	9895	6709	6739	16436	16436					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2859069705009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.599	1	89.656	89.156	90.156	1.0562								0	0	0	0.66264	1	37352	37352		0	0	1		+		13757	9895	6709	6739	16437	16437					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856933474541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.723	1	89.779	89.279	90.279	1.0562								0	0	0	0.66264	1	37402	37402		0	0	1		+		13758	9895	6709	6739	16438	16438					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856933474541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.823	1	89.88	89.38	90.38	1.0562								0	0	0	0.66264	1	37442	37442		0	0	1		+		13759	9895	6709	6739	16439	16439					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2858154177666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.921	1	89.977	89.477	90.477	1.0562								0	0	0	0.66264	1	37482	37482		0	0	1		+		13760	9895	6709	6739	16440	16440					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2861511111259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.055	1	90.112	89.612	90.612	1.0562								0	0	0	0.66264	1	37536	37536		0	0	1		+		13761	9895	6709	6739	16441	16441					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.177	1	90.196	89.696	90.696	1.0199								0	0	0	0.66264	1	37585	37585		0	0	1		+		13762	9895	6709	6739	16442	16442					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854492068291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.275	1	90.295	89.795	90.795	1.0199								0	0	0	0.66264	1	37624	37624		0	0	1		+		13763	9895	6709	6739	16443	16443					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2860595583916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.4	1	90.42	89.92	90.92	1.0199								0	0	0	0.66264	1	37675	37675		0	0	1		+		13764	9895	6709	6739	16444	16444					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856628298759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.502	1	90.522	90.022	91.022	1.0199								0	0	0	0.66264	1	37717	37717		0	0	1		+		13765	9895	6709	6739	16445	16445					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854492068291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.621	1	90.641	90.141	91.141	1.0199								0	0	0	0.66264	1	37768	37768		0	0	1		+		13766	9895	6709	6739	16446	16446					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2861205935478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.742	1	90.762	90.262	91.262	1.0199								0	0	0	0.66264	1	37819	37819		0	0	1		+		13767	9895	6709	6739	16447	16447					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854186892509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.873	1	90.893	90.393	91.393	1.0199								0	0	0	0.66264	1	37873	37873		0	0	1		+		13768	9895	6709	6739	16448	16448					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2859374880791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.998	1	91.018	90.518	91.518	1.0199								0	0	0	0.66264	1	37924	37924		0	0	1		+		13769	9895	6709	6739	16449	16449					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.123	1	91.143	90.643	91.643	1.0199								0	0	0	0.66264	1	37976	37976		0	0	1		+		13770	9895	6709	6739	16450	16450					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2857238650322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.248	1	91.268	90.768	91.768	1.0199								0	0	0	0.66264	1	38027	38027		0	0	1		+		13771	9895	6709	6739	16451	16451					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856628298759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.35	1	91.332	90.832	91.832	0.98157								0	0	0	0.66264	1	38067	38067		0	0	1		+		13772	9895	6709	6739	16452	16452					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2867309451103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.474	1	91.456	90.956	91.956	0.98157								0	0	0	0.66264	1	38118	38118		0	0	1		+		13773	9895	6709	6739	16453	16453					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856933474541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.573	1	91.555	91.055	92.055	0.98157								0	0	0	0.66264	1	38158	38158		0	0	1		+		13774	9895	6709	6739	16454	16454					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.705	1	91.686	91.186	92.186	0.98157								0	0	0	0.66264	1	38212	38212		0	0	1		+		13775	9895	6709	6739	16455	16455					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2858764529228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.825	1	91.806	91.306	92.306	0.98157								0	0	0	0.66264	1	38261	38261		0	0	1		+		13776	9895	6709	6739	16456	16456					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.922	1	91.904	91.404	92.404	0.98157								0	0	0	0.66264	1	38300	38300		0	0	1		+		13777	9895	6709	6739	16457	16457					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.051	1	92.033	91.533	92.533	0.98157								0	0	0	0.66264	1	38351	38351		0	0	1		+		13778	9895	6709	6739	16458	16458					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852661013603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.177	1	92.158	91.658	92.658	0.98157								0	0	0	0.66264	1	38403	38403		0	0	1		+		13779	9895	6709	6739	16459	16459					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.306	1	92.288	91.788	92.788	0.98157								0	0	0	0.66264	1	38457	38457		0	0	1		+		13780	9895	6709	6739	16460	16460					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852050662041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.434	1	92.416	91.916	92.916	0.98157								0	0	0	0.66264	1	38509	38509		0	0	1		+		13781	9895	6709	6739	16461	16461					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.56	1	92.497	91.997	92.997	0.93623								0	0	0	0.66264	1	38561	38561		0	0	1		+		13782	9895	6709	6739	16462	16462					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.681	1	92.618	92.118	93.118	0.93623								0	0	0	0.66264	1	38614	38614		0	0	1		+		13783	9895	6709	6739	16463	16463					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2850219607353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.799	1	92.736	92.236	93.236	0.93623								0	0	0	0.66264	1	38665	38665		0	0	1		+		13784	9895	6709	6739	16464	16464					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.924	1	92.86	92.36	93.36	0.93623								0	0	0	0.66264	1	38717	38717		0	0	1		+		13785	9895	6709	6739	16465	16465					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.055	1	92.991	92.491	93.491	0.93623								0	0	0	0.66264	1	38771	38771		0	0	1		+		13786	9895	6709	6739	16466	16466					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855102419853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.168	1	93.105	92.605	93.605	0.93623								0	0	0	0.66264	1	38818	38818		0	0	1		+		13787	9895	6709	6739	16467	16467					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855407595634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.272	1	93.208	92.708	93.708	0.93623								0	0	0	0.66264	1	38859	38859		0	0	1		+		13788	9895	6709	6739	16468	16468					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.402	1	93.338	92.838	93.838	0.93623								0	0	0	0.66264	1	38911	38911		0	0	1		+		13789	9895	6709	6739	16469	16469					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.495	1	93.431	92.931	93.931	0.93623								0	0	0	0.66264	1	38948	38948		0	0	1		+		13790	9895	6709	6739	16470	16470					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853271365166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.598	1	93.534	93.034	94.034	0.93623								0	0	0	0.66264	1	38988	38988		0	0	1		+		13791	9895	6709	6739	16471	16471					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854492068291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.722	1	93.594	93.094	94.094	0.87176								0	0	0	0.66264	1	39038	39038		0	0	1		+		13792	9895	6709	6739	16472	16472					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2857543826103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.823	1	93.695	93.195	94.195	0.87176								0	0	0	0.66264	1	39078	39078		0	0	1		+		13793	9895	6709	6739	16473	16473					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.921	1	93.793	93.293	94.293	0.87176								0	0	0	0.66264	1	39117	39117		0	0	1		+		13794	9895	6709	6739	16474	16474					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854186892509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.016	1	93.888	93.388	94.388	0.87176								0	0	0	0.66264	1	39154	39154		0	0	1		+		13795	9895	6709	6739	16475	16475					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.118	1	93.99	93.49	94.49	0.87176								0	0	0	0.66264	1	39195	39195		0	0	1		+		13796	9895	6709	6739	16476	16476					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856017947197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.221	1	94.093	93.593	94.593	0.87176								0	0	0	0.66264	1	39236	39236		0	0	1		+		13797	9895	6709	6739	16477	16477					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.351	1	94.223	93.723	94.723	0.87176								0	0	0	0.66264	1	39288	39288		0	0	1		+		13798	9895	6709	6739	16478	16478					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.47	1	94.342	93.842	94.842	0.87176								0	0	0	0.66264	1	39337	39337		0	0	1		+		13799	9895	6709	6739	16479	16479					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855102419853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.575	1	94.447	93.947	94.947	0.87176								0	0	0	0.66264	1	39380	39380		0	0	1		+		13800	9895	6709	6739	16480	16480					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.702	1	94.574	94.074	95.074	0.87176								0	0	0	0.66264	1	39431	39431		0	0	1		+		13801	9895	6709	6739	16481	16481					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854186892509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.832	1	94.704	94.204	95.204	0.87176								0	0	0	0.66264	1	39484	39484		0	0	1		+		13802	9895	6709	6739	16482	16482					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854797244072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.956	1	94.698	94.198	95.198	0.74124								0	0	0	0.66264	1	39535	39535		0	0	1		+		13803	9895	6709	6739	16483	16483					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856017947197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.078	1	94.82	94.32	95.32	0.74124								0	0	0	0.66264	1	39586	39586		0	0	1		+		13804	9895	6709	6739	16484	16484					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855407595634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.202	1	94.943	94.443	95.443	0.74124								0	0	0	0.66264	1	39638	39638		0	0	1		+		13805	9895	6709	6739	16485	16485					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2853576540947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.303	1	95.044	94.544	95.544	0.74124								0	0	0	0.66264	1	39680	39680		0	0	1		+		13806	9895	6709	6739	16486	16486					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2856323122978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.427	1	95.168	94.668	95.668	0.74124								0	0	0	0.66264	1	39732	39732		0	0	1		+		13807	9895	6709	6739	16487	16487					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2858154177666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.548	1	95.289	94.789	95.789	0.74124								0	0	0	0.66264	1	39780	39780		0	0	1		+		13808	9895	6709	6739	16488	16488					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2857238650322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.646	1	95.387	94.887	95.887	0.74124								0	0	0	0.66264	1	39819	39819		0	0	1		+		13809	9895	6709	6739	16489	16489					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2854186892509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.771	1	95.512	95.012	96.012	0.74124								0	0	0	0.66264	1	39869	39869		0	0	1		+		13810	9895	6709	6739	16490	16490					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.916	1	95.657	95.157	96.157	0.74124								0	0	0	0.66264	1	39931	39931		0	0	1		+		13811	9895	6709	6739	16491	16491					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852355837822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.037	1	95.778	95.278	96.278	0.74124								0	0	0	0.66264	1	39983	39983		0	0	1		+		13812	9895	6709	6739	16492	16492					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2855102419853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.235	1	95.656	95.156	96.156	0.4212								0	0	0	0.66264	1	40072	40072		0	0	1		+		13813	9895	6709	6739	16493	16493					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2863647341728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.39	1	95.811	95.311	96.311	0.4212								0	0	0	0.66264	1	40143	40143		0	0	1		+		13814	9895	6709	6739	16494	16494					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2867309451103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.519	1	95.94	95.44	96.44	0.4212								0	0	0	0.66264	1	40199	40199		0	0	1		+		13815	9895	6709	6739	16495	16495					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2860900759697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.657	1	96.078	95.578	96.578	0.4212								0	0	0	0.66264	1	40257	40257		0	0	1		+		13816	9895	6709	6739	16496	16496					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2875549197197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.805	1	96.227	95.727	96.727	0.4212								0	0	0	0.66264	1	40317	40317		0	0	1		+		13817	9895	6709	6739	16497	16497					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.988	1	96.409	95.909	96.909	0.4212								0	0	0	0.66264	1	40391	40391		0	0	1		+		13818	9895	6709	6739	16498	16498					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2863952517509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.15	1	96.571	96.071	97.071	0.4212								0	0	0	0.66264	1	40459	40459		0	0	1		+		13819	9895	6709	6739	16499	16499					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2852661013603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.368	1	96.653	96.153	97.153	0.28442								0	0	0	0.66264	1	40550	40550		0	0	1		+		13820	9895	6709	6739	16500	16500					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.561	1	96.846	96.346	97.346	0.28442								0	0	0	0.66264	1	40631	40631		0	0	1		+		13821	9895	6709	6739	16501	16501					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.666	1	96.95	96.45	97.45	0.28442								0	0	0	0.66264	1	40674	40674		0	0	1		+		13822	9895	6709	6739	16502	16502					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.788	1	97.073	96.573	97.573	0.28442								0	0	0	0.66264	1	40726	40726		0	0	1		+		13823	9895	6709	6739	16503	16503					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2858459353447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.906	1	97.19	96.69	97.69	0.28442								0	0	0	0.66264	1	40774	40774		0	0	1		+		13824	9895	6709	6739	16504	16504					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2862426638603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.94	1	103.1	102.6	103.6	0.16445								0	0	0	0.66264	1	43365	43365		0	0	1		+		13825	9895	6709	6739	16505	16505					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.68	1	103.84	103.34	104.34	0.16055								0	0	0	0.66264	1	43760	43760		0	0	1		+		13826	9895	6709	6739	16506	16506					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2832519412041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.579	1	16.618	16.118	17.118	1.0392								0	0	0	0.66264	1	6463	6463		0	0	1		+		13827	9895	6709	6739	16507	16507					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.969	1	17.008	16.508	17.508	1.0392								0	0	0	0.66264	1	6628	6628		0	0	1		+		13828	9895	6709	6739	16508	16508					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.182	1	17.221	16.721	17.721	1.0392								0	0	0	0.66264	1	6717	6717		0	0	1		+		13829	9895	6709	6739	16509	16509					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.451	1	17.49	16.99	17.99	1.0392								0	0	0	0.66264	1	6832	6832		0	0	1		+		13830	9895	6709	6739	16510	16510					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2836181521416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.393	1	37.21	36.71	37.71	1.8176								0	0	0	0.66264	1	14841	14841		0	0	1		+		13831	9895	6709	6739	16511	16511					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2836791872978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.511	1	38.329	37.829	38.829	1.8176								0	0	0	0.66264	1	15316	15316		0	0	1		+		13832	9895	6709	6739	16512	16512					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.877	1	59.846	59.346	60.346	1.969								0	0	0	0.66264	1	24278	24278		0	0	1		+		13833	9895	6709	6739	16513	16513					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.407	1	60.376	59.876	60.876	1.969								0	0	0	0.66264	1	24498	24498		0	0	1		+		13834	9895	6709	6739	16514	16514					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.668	1	60.637	60.137	61.137	1.969								0	0	0	0.66264	1	24615	24615		0	0	1		+		13835	9895	6709	6739	16515	16515					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.402	1	61.371	60.871	61.871	1.969								0	0	0	0.66264	1	24923	24923		0	0	1		+		13836	9895	6709	6739	16516	16516					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.563	1	61.532	61.032	62.032	1.969								0	0	0	0.66264	1	24995	24995		0	0	1		+		13837	9895	6709	6739	16517	16517					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2857238650322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.673	1	61.642	61.142	62.142	1.969								0	0	0	0.66264	1	25043	25043		0	0	1		+		13838	9895	6709	6739	16518	16518					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850219607353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.798	1	61.767	61.267	62.267	1.969								0	0	0	0.66264	1	25095	25095		0	0	1		+		13839	9895	6709	6739	16519	16519					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.914	1	61.883	61.383	62.383	1.969								0	0	0	0.66264	1	25144	25144		0	0	1		+		13840	9895	6709	6739	16520	16520					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2853881716728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.038	1	62.006	61.506	62.506	1.9677								0	0	0	0.66264	1	25195	25195		0	0	1		+		13841	9895	6709	6739	16521	16521					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2853576540947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.167	1	62.133	61.633	62.633	1.9653								0	0	0	0.66264	1	25248	25248		0	0	1		+		13842	9895	6709	6739	16522	16522					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2855712771416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.286	1	62.252	61.752	62.752	1.9653								0	0	0	0.66264	1	25298	25298		0	0	1		+		13843	9895	6709	6739	16523	16523					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2853271365166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.386	1	62.351	61.851	62.851	1.9653								0	0	0	0.66264	1	25339	25339		0	0	1		+		13844	9895	6709	6739	16524	16524					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.515	1	62.48	61.98	62.98	1.9653								0	0	0	0.66264	1	25392	25392		0	0	1		+		13845	9895	6709	6739	16525	16525					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.637	1	62.603	62.103	63.103	1.9653								0	0	0	0.66264	1	25443	25443		0	0	1		+		13846	9895	6709	6739	16526	16526					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.067	1	63.032	62.532	63.532	1.9653								0	0	0	0.66264	1	25625	25625		0	0	1		+		13847	9895	6709	6739	16527	16527					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.179	1	63.144	62.644	63.644	1.9653								0	0	0	0.66264	1	25673	25673		0	0	1		+		13848	9895	6709	6739	16528	16528					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.277	1	63.234	62.734	63.734	1.9571								0	0	0	0.66264	1	25714	25714		0	0	1		+		13849	9895	6709	6739	16529	16529					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.374	1	63.331	62.831	63.831	1.9571								0	0	0	0.66264	1	25754	25754		0	0	1		+		13850	9895	6709	6739	16530	16530					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.472	1	63.429	62.929	63.929	1.9571								0	0	0	0.66264	1	25794	25794		0	0	1		+		13851	9895	6709	6739	16531	16531					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.602	1	63.559	63.059	64.059	1.9571								0	0	0	0.66264	1	25846	25846		0	0	1		+		13852	9895	6709	6739	16532	16532					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.732	1	63.689	63.189	64.189	1.9571								0	0	0	0.66264	1	25900	25900		0	0	1		+		13853	9895	6709	6739	16533	16533					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.487	1	64.431	63.931	64.931	1.9444								0	0	0	0.66264	1	26222	26222		0	0	1		+		13854	9895	6709	6739	16534	16534					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.593	1	64.538	64.038	65.038	1.9444								0	0	0	0.66264	1	26266	26266		0	0	1		+		13855	9895	6709	6739	16535	16535					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.721	1	64.665	64.165	65.165	1.9444								0	0	0	0.66264	1	26319	26319		0	0	1		+		13856	9895	6709	6739	16536	16536					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.836	1	64.781	64.281	65.281	1.9444								0	0	0	0.66264	1	26367	26367		0	0	1		+		13857	9895	6709	6739	16537	16537					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.955	1	64.899	64.399	65.399	1.9444								0	0	0	0.66264	1	26418	26418		0	0	1		+		13858	9895	6709	6739	16538	16538					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.082	1	65.027	64.527	65.527	1.9444								0	0	0	0.66264	1	26472	26472		0	0	1		+		13859	9895	6709	6739	16539	16539					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.206	1	65.15	64.65	65.65	1.9444								0	0	0	0.66264	1	26523	26523		0	0	1		+		13860	9895	6709	6739	16540	16540					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850219607353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.339	1	65.283	64.783	65.783	1.9444								0	0	0	0.66264	1	26577	26577		0	0	1		+		13861	9895	6709	6739	16541	16541					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.462	1	65.407	64.907	65.907	1.9444								0	0	0	0.66264	1	26626	26626		0	0	1		+		13862	9895	6709	6739	16542	16542					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.591	1	65.535	65.035	66.035	1.9444								0	0	0	0.66264	1	26679	26679		0	0	1		+		13863	9895	6709	6739	16543	16543					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.739	1	65.667	65.167	66.167	1.928								0	0	0	0.66264	1	26742	26742		0	0	1		+		13864	9895	6709	6739	16544	16544					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.857	1	65.785	65.285	66.285	1.928								0	0	0	0.66264	1	26792	26792		0	0	1		+		13865	9895	6709	6739	16545	16545					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850829958916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.956	1	65.885	65.385	66.385	1.928								0	0	0	0.66264	1	26834	26834		0	0	1		+		13866	9895	6709	6739	16546	16546					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.076	1	66.004	65.504	66.504	1.928								0	0	0	0.66264	1	26884	26884		0	0	1		+		13867	9895	6709	6739	16547	16547					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.173	1	66.101	65.601	66.601	1.928								0	0	0	0.66264	1	26924	26924		0	0	1		+		13868	9895	6709	6739	16548	16548					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.303	1	66.231	65.731	66.731	1.928								0	0	0	0.66264	1	26978	26978		0	0	1		+		13869	9895	6709	6739	16549	16549					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848388552666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.424	1	66.352	65.852	66.852	1.928								0	0	0	0.66264	1	27029	27029		0	0	1		+		13870	9895	6709	6739	16550	16550					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.524	1	66.452	65.952	66.952	1.928								0	0	0	0.66264	1	27068	27068		0	0	1		+		13871	9895	6709	6739	16551	16551					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.646	1	66.574	66.074	67.074	1.928								0	0	0	0.66264	1	27118	27118		0	0	1		+		13872	9895	6709	6739	16552	16552					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.748	1	66.676	66.176	67.176	1.928								0	0	0	0.66264	1	27160	27160		0	0	1		+		13873	9895	6709	6739	16553	16553					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.934	1	66.843	66.343	67.343	1.9085								0	0	0	0.66264	1	27238	27238		0	0	1		+		13874	9895	6709	6739	16554	16554					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.064	1	66.973	66.473	67.473	1.9085								0	0	0	0.66264	1	27292	27292		0	0	1		+		13875	9895	6709	6739	16555	16555					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.213	1	67.122	66.622	67.622	1.9085								0	0	0	0.66264	1	27354	27354		0	0	1		+		13876	9895	6709	6739	16556	16556					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.335	1	67.244	66.744	67.744	1.9085								0	0	0	0.66264	1	27406	27406		0	0	1		+		13877	9895	6709	6739	16557	16557					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.383	1	68.271	67.771	68.771	1.8889								0	0	0	0.66264	1	27847	27847		0	0	1		+		13878	9895	6709	6739	16558	16558					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.663	1	68.552	68.052	69.052	1.8889								0	0	0	0.66264	1	27965	27965		0	0	1		+		13879	9895	6709	6739	16559	16559					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.795	1	68.683	68.183	69.183	1.8889								0	0	0	0.66264	1	28023	28023		0	0	1		+		13880	9895	6709	6739	16560	16560					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.912	1	68.801	68.301	69.301	1.8889								0	0	0	0.66264	1	28072	28072		0	0	1		+		13881	9895	6709	6739	16561	16561					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.036	1	68.924	68.424	69.424	1.8889								0	0	0	0.66264	1	28123	28123		0	0	1		+		13882	9895	6709	6739	16562	16562					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.421	1	69.291	68.791	69.791	1.87								0	0	0	0.66264	1	28288	28288		0	0	1		+		13883	9895	6709	6739	16563	16563					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.524	1	69.394	68.894	69.894	1.87								0	0	0	0.66264	1	28330	28330		0	0	1		+		13884	9895	6709	6739	16564	16564					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.654	1	69.524	69.024	70.024	1.87								0	0	0	0.66264	1	28385	28385		0	0	1		+		13885	9895	6709	6739	16565	16565					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848693728447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.77	1	69.64	69.14	70.14	1.87								0	0	0	0.66264	1	28433	28433		0	0	1		+		13886	9895	6709	6739	16566	16566					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.889	1	69.759	69.259	70.259	1.87								0	0	0	0.66264	1	28484	28484		0	0	1		+		13887	9895	6709	6739	16567	16567					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.043	1	69.913	69.413	70.413	1.87								0	0	0	0.66264	1	28550	28550		0	0	1		+		13888	9895	6709	6739	16568	16568					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.168	1	70.038	69.538	70.538	1.87								0	0	0	0.66264	1	28602	28602		0	0	1		+		13889	9895	6709	6739	16569	16569					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2849609255791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.618	1	84.288	83.788	84.788	1.67								0	0	0	0.66264	1	34659	34659		0	0	1		+		13890	9895	6709	6739	16570	16570					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.803	1	84.473	83.973	84.973	1.67								0	0	0	0.66264	1	34737	34737		0	0	1		+		13891	9895	6709	6739	16571	16571					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2837097048759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.928	1	84.598	84.098	85.098	1.67								0	0	0	0.66264	1	34788	34788		0	0	1		+		13892	9895	6709	6739	16572	16572					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.045	1	84.683	84.183	85.183	1.6379								0	0	0	0.66264	1	34837	34837		0	0	1		+		13893	9895	6709	6739	16573	16573					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.147	1	84.785	84.285	85.285	1.6379								0	0	0	0.66264	1	34878	34878		0	0	1		+		13894	9895	6709	6739	16574	16574					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.244	1	84.881	84.381	85.381	1.6379								0	0	0	0.66264	1	34918	34918		0	0	1		+		13895	9895	6709	6739	16575	16575					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.367	1	85.005	84.505	85.505	1.6379								0	0	0	0.66264	1	34968	34968		0	0	1		+		13896	9895	6709	6739	16576	16576					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2834655642509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.507	1	85.145	84.645	85.645	1.6379								0	0	0	0.66264	1	35026	35026		0	0	1		+		13897	9895	6709	6739	16577	16577					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2835876345634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.606	1	85.244	84.744	85.744	1.6379								0	0	0	0.66264	1	35068	35068		0	0	1		+		13898	9895	6709	6739	16578	16578					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.735	1	85.373	84.873	85.873	1.6379								0	0	0	0.66264	1	35121	35121		0	0	1		+		13899	9895	6709	6739	16579	16579					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.832	1	85.47	84.97	85.97	1.6379								0	0	0	0.66264	1	35161	35161		0	0	1		+		13900	9895	6709	6739	16580	16580					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.947	1	85.585	85.085	86.085	1.6379								0	0	0	0.66264	1	35208	35208		0	0	1		+		13901	9895	6709	6739	16581	16581					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.146	1	85.784	85.284	86.284	1.6379								0	0	0	0.66264	1	35290	35290		0	0	1		+		13902	9895	6709	6739	16582	16582					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.298	1	85.894	85.394	86.394	1.5962								0	0	0	0.66264	1	35356	35356		0	0	1		+		13903	9895	6709	6739	16583	16583					0.25026506998415243
KKKKKKKGKA	10	Unmodified	_KKKKKKKGKA_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.402	1	85.998	85.498	86.498	1.5962								0	0	0	0.66264	1	35400	35400		0	0	1		+		13904	9895	6709	6739	16584	16584					0.25026506998415243
KKKKKKKKAR	10	Unmodified	_KKKKKKKKAR_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__ENSG00000183354|ENST00000399933|KIAA2026	REV__ENSG00000183354|ENST00000399933|KIAA2026	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3097717165947	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.93	1	112.97	112.47	113.47	0.044189								0	0	0	0.66255	1	48655	48655		0.13989	0.13989	1				13905	11390	6710	6740	16585	16585					0.2843357367239605
KKKKKKKKFFF	11	Unmodified	_KKKKKKKKFFF_					0	0	0			REV__AluJb_dup51192|chr7:107770157-107770196:-|1.9495540912656453|0.0004798219220502|11.99|429.0|1|1|sense	REV__AluJb_dup51192|chr7:107770157-107770196:-|1.9495540912656453|0.0004798219220502|11.99|429.0|1|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	742.9943115115166	2	742.995032	1483.97551	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.17	1	113.34	112.84	113.84	0.16914								0	0	0	0.63775	1	49073	49073		0	0	1		+		13906	8102	6711	6741	16586	16586					0.2528818416346894
KKKKKKKKKHR	11	Unmodified	_KKKKKKKKKHR_					0	0	0		ENSG00000164609|ENST00000297151|SLU7	ENSG00000164609|ENST00000297151|SLU7	ENSG00000164609|ENST00000297151|SLU7	MSMS	GG20161007_CRH_Patient100_W632_02	4	732.9293701052666	2	733.019904	1464.02525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.781	1	98.037	97.537	98.537	0.25636								0	0	0	0.63775	1	41139	41139		0.30703	0.03801	1				13907	3784	6712	6742	16587	16587					0.31180311892126156
KKKKKKKKLN	10	Unmodified	_KKKKKKKKLN_					0	0	0		AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|13|3|sense	AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|13|3|sense	AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|13|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3065063357353	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.151	1	11.913	11.413	12.413	0.76165								0	0	0	0.66255	1	4633	4633		0.13989	0	1				13908	35	6713	6743	16588	16588					0.2731075157826126
KKKKKKKKLV	10	Unmodified	_KKKKKKKKLV_					0	0	0			REV__ENST00000522197.1_1_8:122652185-122654912:+|nuORF	REV__ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.714	1	28.993	28.493	29.493	1.2789								0	0	0	0.66254	1	11614	11614		0.15932	0.15932	1		+		13909	13591	6714	6744	16589	16589					0.3054822610067731
KKKKKKKKPF	10	Unmodified	_KKKKKKKKPF_					0	0	0		EIF2S2|p.M24I|1|0.14|ENSG00000125977|chr20:34105489-34105489|C/T|missense_variant;ENSG00000125977|ENST00000374980|EIF2S2	EIF2S2|p.M24I|1|0.14|ENSG00000125977|chr20:34105489-34105489|C/T|missense_variant	EIF2S2|p.M24I|1|0.14|ENSG00000125977|chr20:34105489-34105489|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	644.4512206912041	2	644.453	1286.89145	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.99	1	115.14	114.64	115.64	0.14976								0	0	0	0.66264	1	49734	49734		0	0	1				13910	445	6715	6745	16590	16590					0.25947653066577914
KKKKKKKKQ	9	Unmodified	_KKKKKKKKQ_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|88|2|sense;ENSG00000147649|ENST00000336273|MTDH	REV__AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;REV__nc|ENSG00000070814|Q13428-2|TCOF1;ENSG00000147649|ENST00000336273|MTDH	ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0791	1	6.159	5.659	6.659	0.079923								0	0	0	0.42693	1	2514	2514		0.23584	0.076522	1				13911	8121;14314;8721;3190	6716	6746	16591	16591					0.25026506998392506
KKKKKKKKQY	10	Unmodified	_KKKKKKKKQY_					0	0	0			REV__AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense	REV__AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4802734255791	4	334.48032	1333.89217	-2.3632	-0.00079045	-0.51662	-0.0001728	-2.8798	-0.00096325	334.48073959403655	26.214	1.7252	26.214	25.534	27.259	0					255	56	6	0	0	0	0.89803	1	10950	10950		0.15932	0	1	123080000			13912	8121	6717	6747	16592	16592					0.2385844771565644
KKKKKKKKVL	10	Unmodified	_KKKKKKKKVL_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.701	1	61.12	60.62	61.62	1.4196								0	0	0	0.66254	1	25033	25033		0.15932	0	1		+		13913	9113	6718	6748	16593	16593					0.3054822610067731
KKKKKKKLC	9	Unmodified	_KKKKKKKLC_					0	0	0			REV__chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	REV__chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3950683474541	2	566.391554	1130.76855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.47	1	105.63	105.13	106.13	0.15859								0	0	0	0.42693	1	44933	44933		0	0	1		+		13914	8106	6719	6749	16594	16594					0.20840073343674703
KKKKKKKLC	9	Unmodified	_KKKKKKKLC_					0	0	0			REV__chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	REV__chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3965331912041	2	566.391554	1130.76855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.6	1	105.76	105.26	106.26	0.15859								0	0	0	0.42693	1	45013	45013		0	0	1		+		13915	8106	6719	6749	16595	16595					0.20840073343674703
KKKKKKKNKK	10	Unmodified	_KKKKKKKNKK_					0	0	0		AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|3|1|sense	AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|3|1|sense	AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|3|1|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	643.4636718630791	2	643.461356	1284.90816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.12	1	107.17	106.67	107.67	0.052452								0	0	0	0.6624	1	45759	45759		0.40072	0	1				13916	46	6720	6750	16596	16596					0.2771015395253471
KKKKKKKQTHN	11	Unmodified	_KKKKKKKQTHN_					0	0	0			REV__ENST00000323571.8_1_17:38438263-38438389:+|nuORF	REV__ENST00000323571.8_1_17:38438263-38438389:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	698.4117309451103	2	698.448977	1394.8834	2.7481	0.0019194	-2.1851	-0.0015262	0.56303	0.00039325	698.4476171960121	105.79	0.11136	105.95	105.91	106.02	0.15859					16	5	4	0	0	0	0.14606	1	45183	45183		0.26902	0.26902	1	49474000	+		13917	12419	6721	6751	16597	16597					0.20175474079178457
KKKKKKLKKQF	11	Unmodified	_KKKKKKLKKQF_					0	0	0			REV__ENST00000378026.4_3_12:106631761-106631812:-|nuORF	REV__ENST00000378026.4_3_12:106631761-106631812:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	716.9421874880791	2	716.497939	1430.98132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.006	1	99.204	98.704	99.704	0.19767								0	0	0	0.63775	1	41681	41681		0	0	1		+		13918	12737	6722	6752	16598	16598					0.2830728267513223
KKKKKKRKQET	11	Unmodified	_KKKKKKRKQET_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	715.4716674685478	2	715.469909	1428.92527	1.4053	0.0010054	1.2016	0.00085969	2.6068	0.0018651	715.4703874001717	105.88	0.15739	105.88	105.79	105.95	0					16	7	3	0	0	0	1.0388	1	45035	45035		0	0	1	46286000			13919	722	6723	6753	16599	16599					0.22796029767687287
KKKKKKRKQET	11	Unmodified	_KKKKKKRKQET_					0	0	0		ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	ENSG00000055483|ENST00000449938|USP36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.3176757693291	3	477.315698	1428.92527	3.2713	0.0015614	-0.55468	-0.00026476	2.7166	0.0012967	477.31603934746977	105.81	0.11136	105.97	105.91	106.02	0.15859					15	5	3	0	0	0	1.0402	1	45165	45165		0.094841	0	1	27838000			13920	722	6723	6753	16600	16600					0.22796029767687287
KKKKKKRQY	9	Unmodified	_KKKKKKRQY_					0	0	0			REV__AluJb_dup53617|chr8:11864197-11864505:+|1.3540017899668186|0.1824579183855656|2.89|429.0|1|1|sense	REV__AluJb_dup53617|chr8:11864197-11864505:+|1.3540017899668186|0.1824579183855656|2.89|429.0|1|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2756530642509	3	412.275063	1233.80336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.224	1	47.224	46.724	47.724	0								0	0	0	0.42693	1	19733	19733		0.26902	0.1097	1		+		13921	8103	6724	6754	16601	16601					0.19581032476003202
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2678405642509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.505	1	14.618	14.118	15.118	0.11295								0	0	0	0.42693	1	6018	6018		0.26902	0.26902	1		+		13922	8108	6725	6755	16602	16602					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.527	1	15.657	15.157	16.157	0.13022								0	0	0	0.42693	1	6443	6443		0.26902	0.26902	1		+		13923	8108	6725	6755	16603	16603					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.553	1	18.726	18.226	19.226	0.17285								0	0	0	0.42693	1	7702	7702		0.26902	0.26902	1		+		13924	8108	6725	6755	16604	16604					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.871	1	18.851	18.351	19.351	0.97922								0	0	0	0.42693	1	7440	7440		0.26902	0.26902	1		+		13925	8108	6725	6755	16605	16605					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.4	1	13.187	12.687	13.687	0.78751								0	0	0	0.42693	1	5146	5146		0.26902	0.26902	1		+		13926	8108	6725	6755	16606	16606					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.912	1	14.739	14.239	15.239	0.82789								0	0	0	0.42693	1	5768	5768		0.26902	0.26902	1		+		13927	8108	6725	6755	16607	16607					0.22265647447261472
KKKKKKRSV	9	Unmodified	_KKKKKKRSV_					0	0	0			REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	REV__AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.917	1	15.814	15.314	16.314	0.89664								0	0	0	0.42693	1	6189	6189		0.26902	0.26902	1		+		13928	8108	6725	6755	16608	16608					0.22265647447261472
KKKKKKRTNNL	11	Unmodified	_KKKKKKRTNNL_					0	0	0		ENST00000341049.6_1_7:116199659-116199932:+|nuORF	ENST00000341049.6_1_7:116199659-116199932:+|nuORF	ENST00000341049.6_1_7:116199659-116199932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	693.4589721560478	2	693.456802	1384.89905	2.5686	0.0017812	0.10151	7.0394E-05	2.6701	0.0018516	693.4569234485707	107.22	0.22945	107.38	107.29	107.52	0.15795					19	11	2	0	0	0	1.0405	1	46018	46018		0	0	1	163280000			13929	5932	6726	6756	16609	16609					0.221997605962315
KKKKKKTG	8	Unmodified	_KKKKKKTG_					0	0	0		ENST00000373344.9_1_X:76762287-76762440:-|nuORF;ENST00000377291.2_1_5:175110069-175110369:+|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	ENST00000373344.9_1_X:76762287-76762440:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	472.6698791384697	2	473.332019	944.649485	3.3016	0.0015628	3.8945	0.0018434	7.1961	0.0034062	473.3343167675926	109.56	0.68561	109.71	109.65	110.34	0.15898					28	23	2	0	0	0	2.3239	1	47728	47728		0	0	1	2345200			13930	6160	6727	6757	16610	16610					0.17494622710478325
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.98524	1	0.98524	0.48524	1.4852	0								0	0	0	0.66264	1	404	404		0	0	1		+		13931	14606	6728	6758	16611	16611					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1019	1	1.1019	0.60188	1.6019	0								0	0	0	0.66264	1	451	451		0	0	1		+		13932	14606	6728	6758	16612	16612					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1975	1	1.1975	0.69751	1.6975	0								0	0	0	0.66264	1	491	491		0	0	1		+		13933	14606	6728	6758	16613	16613					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3015	1	1.3015	0.80148	1.8015	0								0	0	0	0.66264	1	534	534		0	0	1		+		13934	14606	6728	6758	16614	16614					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.169	1	37.169	36.669	37.669	0								0	0	0	0.66264	1	15582	15582		0	0	1		+		13935	14606	6728	6758	16615	16615					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.267	1	37.267	36.767	37.767	0								0	0	0	0.66264	1	15623	15623		0	0	1		+		13936	14606	6728	6758	16616	16616					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.494	1	37.494	36.994	37.994	0								0	0	0	0.66264	1	15717	15717		0	0	1		+		13937	14606	6728	6758	16617	16617					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.667	1	37.667	37.167	38.167	0								0	0	0	0.66264	1	15790	15790		0	0	1		+		13938	14606	6728	6758	16618	16618					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3166686892509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.817	1	37.817	37.317	38.317	0								0	0	0	0.66264	1	15852	15852		0	0	1		+		13939	14606	6728	6758	16619	16619					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.935	1	37.935	37.435	38.435	0								0	0	0	0.66264	1	15901	15901		0	0	1		+		13940	14606	6728	6758	16620	16620					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.909	1	43.909	43.409	44.409	0								0	0	0	0.66264	1	18377	18377		0	0	1		+		13941	14606	6728	6758	16621	16621					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.038	1	44.038	43.538	44.538	0								0	0	0	0.66264	1	18428	18428		0	0	1		+		13942	14606	6728	6758	16622	16622					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.166	1	44.166	43.666	44.666	0								0	0	0	0.66264	1	18481	18481		0	0	1		+		13943	14606	6728	6758	16623	16623					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.295	1	44.295	43.795	44.795	0								0	0	0	0.66264	1	18535	18535		0	0	1		+		13944	14606	6728	6758	16624	16624					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.41	1	44.41	43.91	44.91	0								0	0	0	0.66264	1	18584	18584		0	0	1		+		13945	14606	6728	6758	16625	16625					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.538	1	44.538	44.038	45.038	0								0	0	0	0.66264	1	18638	18638		0	0	1		+		13946	14606	6728	6758	16626	16626					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.652	1	44.652	44.152	45.152	0								0	0	0	0.66264	1	18686	18686		0	0	1		+		13947	14606	6728	6758	16627	16627					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.775	1	44.775	44.275	45.275	0								0	0	0	0.66264	1	18738	18738		0	0	1		+		13948	14606	6728	6758	16628	16628					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.9	1	44.9	44.4	45.4	0								0	0	0	0.66264	1	18791	18791		0	0	1		+		13949	14606	6728	6758	16629	16629					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.032	1	45.032	44.532	45.532	0								0	0	0	0.66264	1	18845	18845		0	0	1		+		13950	14606	6728	6758	16630	16630					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.151	1	45.151	44.651	45.651	0								0	0	0	0.66254	1	18894	18894		0.15932	0	1		+		13951	14606	6728	6758	16631	16631					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.279	1	45.279	44.779	45.779	0								0	0	0	0.66264	1	18946	18946		0	0	1		+		13952	14606	6728	6758	16632	16632					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3166686892509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.41	1	45.41	44.91	45.91	0								0	0	0	0.66264	1	19000	19000		0	0	1		+		13953	14606	6728	6758	16633	16633					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.534	1	45.534	45.034	46.034	0								0	0	0	0.66264	1	19052	19052		0	0	1		+		13954	14606	6728	6758	16634	16634					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.65	1	45.65	45.15	46.15	0								0	0	0	0.66264	1	19100	19100		0	0	1		+		13955	14606	6728	6758	16635	16635					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.895	1	59.895	59.395	60.395	0								0	0	0	0.66264	1	24974	24974		0	0	1		+		13956	14606	6728	6758	16636	16636					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.464	1	64.464	63.964	64.964	0								0	0	0	0.66264	1	26873	26873		0	0	1		+		13957	14606	6728	6758	16637	16637					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.781	1	64.781	64.281	65.281	0								0	0	0	0.66264	1	27001	27001		0	0	1		+		13958	14606	6728	6758	16638	16638					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.017	1	65.017	64.517	65.517	0								0	0	0	0.66264	1	27097	27097		0	0	1		+		13959	14606	6728	6758	16639	16639					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.359	1	65.359	64.859	65.859	0								0	0	0	0.66264	1	27239	27239		0	0	1		+		13960	14606	6728	6758	16640	16640					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.672	1	66.672	66.172	67.172	0								0	0	0	0.66264	1	27770	27770		0	0	1		+		13961	14606	6728	6758	16641	16641					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.807	1	66.807	66.307	67.307	0								0	0	0	0.66264	1	27825	27825		0	0	1		+		13962	14606	6728	6758	16642	16642					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.732	1	67.732	67.232	68.232	0								0	0	0	0.66264	1	28211	28211		0	0	1		+		13963	14606	6728	6758	16643	16643					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.836	1	68.836	68.336	69.336	0								0	0	0	0.66264	1	28666	28666		0	0	1		+		13964	14606	6728	6758	16644	16644					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.074	1	69.074	68.574	69.574	0								0	0	0	0.66264	1	28766	28766		0	0	1		+		13965	14606	6728	6758	16645	16645					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.199	1	69.199	68.699	69.699	0								0	0	0	0.66264	1	28818	28818		0	0	1		+		13966	14606	6728	6758	16646	16646					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.394	1	69.394	68.894	69.894	0								0	0	0	0.66264	1	28900	28900		0	0	1		+		13967	14606	6728	6758	16647	16647					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.575	1	69.575	69.075	70.075	0								0	0	0	0.66264	1	28974	28974		0	0	1		+		13968	14606	6728	6758	16648	16648					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.701	1	69.701	69.201	70.201	0								0	0	0	0.66264	1	29025	29025		0	0	1		+		13969	14606	6728	6758	16649	16649					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.838	1	69.838	69.338	70.338	0								0	0	0	0.66264	1	29081	29081		0	0	1		+		13970	14606	6728	6758	16650	16650					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.033	1	70.033	69.533	70.533	0								0	0	0	0.66264	1	29161	29161		0	0	1		+		13971	14606	6728	6758	16651	16651					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.687	1	91.687	91.187	92.187	0								0	0	0	0.66264	1	38316	38316		0	0	1		+		13972	14606	6728	6758	16652	16652					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3166686892509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.826	1	91.826	91.326	92.326	0								0	0	0	0.66264	1	38373	38373		0	0	1		+		13973	14606	6728	6758	16653	16653					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.948	1	91.948	91.448	92.448	0								0	0	0	0.66264	1	38423	38423		0	0	1		+		13974	14606	6728	6758	16654	16654					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3171264529228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.097	1	92.097	91.597	92.597	0								0	0	0	0.66264	1	38485	38485		0	0	1		+		13975	14606	6728	6758	16655	16655					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3168212771416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.226	1	92.226	91.726	92.726	0								0	0	0	0.66264	1	38539	38539		0	0	1		+		13976	14606	6728	6758	16656	16656					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.755	1	92.755	92.255	93.255	0								0	0	0	0.66264	1	38765	38765		0	0	1		+		13977	14606	6728	6758	16657	16657					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.894	1	92.894	92.394	93.394	0								0	0	0	0.66264	1	38827	38827		0	0	1		+		13978	14606	6728	6758	16658	16658					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.012	1	93.012	92.512	93.512	0								0	0	0	0.66264	1	38877	38877		0	0	1		+		13979	14606	6728	6758	16659	16659					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.13	1	93.13	92.63	93.63	0								0	0	0	0.66264	1	38926	38926		0	0	1		+		13980	14606	6728	6758	16660	16660					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3172790408134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.235	1	93.235	92.735	93.735	0								0	0	0	0.66264	1	38969	38969		0	0	1		+		13981	14606	6728	6758	16661	16661					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167297244072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.365	1	93.365	92.865	93.865	0								0	0	0	0.66264	1	39022	39022		0	0	1		+		13982	14606	6728	6758	16662	16662					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167297244072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.484	1	93.484	92.984	93.984	0								0	0	0	0.66264	1	39071	39071		0	0	1		+		13983	14606	6728	6758	16663	16663					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.61	1	93.61	93.11	94.11	0								0	0	0	0.66264	1	39122	39122		0	0	1		+		13984	14606	6728	6758	16664	16664					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3168823122978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.928	1	93.928	93.428	94.428	0								0	0	0	0.66264	1	39253	39253		0	0	1		+		13985	14606	6728	6758	16665	16665					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.065	1	94.065	93.565	94.565	0								0	0	0	0.66264	1	39310	39310		0	0	1		+		13986	14606	6728	6758	16666	16666					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.647	1	94.647	94.147	95.147	0								0	0	0	0.66264	1	39556	39556		0	0	1		+		13987	14606	6728	6758	16667	16667					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165466189384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.762	1	94.762	94.262	95.262	0								0	0	0	0.66264	1	39604	39604		0	0	1		+		13988	14606	6728	6758	16668	16668					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.879	1	94.879	94.379	95.379	0								0	0	0	0.66264	1	39653	39653		0	0	1		+		13989	14606	6728	6758	16669	16669					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3180419802666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.976	1	94.976	94.476	95.476	0								0	0	0	0.66264	1	39693	39693		0	0	1		+		13990	14606	6728	6758	16670	16670					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3178283572197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.107	1	95.107	94.607	95.607	0								0	0	0	0.66264	1	39746	39746		0	0	1		+		13991	14606	6728	6758	16671	16671					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3171264529228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.23	1	95.23	94.73	95.73	0								0	0	0	0.66264	1	39797	39797		0	0	1		+		13992	14606	6728	6758	16672	16672					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.484	1	95.484	94.984	95.984	0								0	0	0	0.66264	1	39909	39909		0	0	1		+		13993	14606	6728	6758	16673	16673					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.602	1	95.602	95.102	96.102	0								0	0	0	0.66264	1	39960	39960		0	0	1		+		13994	14606	6728	6758	16674	16674					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3172485232353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.671	1	96.671	96.171	97.171	0								0	0	0	0.66264	1	40409	40409		0	0	1		+		13995	14606	6728	6758	16675	16675					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3131896853447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.18	1	104.18	103.68	104.68	0								0	0	0	0.66264	1	43919	43919		0	0	1		+		13996	14606	6728	6758	16676	16676					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167907595634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.72	1	104.72	104.22	105.22	0								0	0	0	0.66264	1	44268	44268		0	0	1		+		13997	14606	6728	6758	16677	16677					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.89	1	104.89	104.39	105.39	0								0	0	0	0.66264	1	44386	44386		0	0	1		+		13998	14606	6728	6758	16678	16678					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.99	1	104.99	104.49	105.49	0								0	0	0	0.66264	1	44461	44461		0	0	1		+		13999	14606	6728	6758	16679	16679					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3147765994072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.17	104.67	105.67	0								0	0	0	0.66264	1	44578	44578		0	0	1		+		14000	14606	6728	6758	16680	16680					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3153259158134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.27	1	105.27	104.77	105.77	0								0	0	0	0.66264	1	44644	44644		0	0	1		+		14001	14606	6728	6758	16681	16681					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.36	1	105.36	104.86	105.86	0								0	0	0	0.66264	1	44703	44703		0	0	1		+		14002	14606	6728	6758	16682	16682					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3176147341728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.6	1	105.6	105.1	106.1	0								0	0	0	0.66264	1	44864	44864		0	0	1		+		14003	14606	6728	6758	16683	16683					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.72	1	105.72	105.22	106.22	0								0	0	0	0.66264	1	44944	44944		0	0	1		+		14004	14606	6728	6758	16684	16684					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.83	1	105.83	105.33	106.33	0								0	0	0	0.66264	1	45016	45016		0	0	1		+		14005	14606	6728	6758	16685	16685					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.92	1	105.92	105.42	106.42	0								0	0	0	0.66264	1	45080	45080		0	0	1		+		14006	14606	6728	6758	16686	16686					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.02	1	106.02	105.52	106.52	0								0	0	0	0.66264	1	45148	45148		0	0	1		+		14007	14606	6728	6758	16687	16687					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.13	1	106.13	105.63	106.63	0								0	0	0	0.66264	1	45210	45210		0	0	1		+		14008	14606	6728	6758	16688	16688					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3168823122978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.32	1	106.32	105.82	106.82	0								0	0	0	0.66264	1	45343	45343		0	0	1		+		14009	14606	6728	6758	16689	16689					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.43	1	106.43	105.93	106.93	0								0	0	0	0.66264	1	45410	45410		0	0	1		+		14010	14606	6728	6758	16690	16690					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.55	1	106.55	106.05	107.05	0								0	0	0	0.66264	1	45480	45480		0	0	1		+		14011	14606	6728	6758	16691	16691					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.66	1	106.66	106.16	107.16	0								0	0	0	0.66264	1	45549	45549		0	0	1		+		14012	14606	6728	6758	16692	16692					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.75	1	106.75	106.25	107.25	0								0	0	0	0.66264	1	45612	45612		0	0	1		+		14013	14606	6728	6758	16693	16693					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.86	1	106.86	106.36	107.36	0								0	0	0	0.66264	1	45677	45677		0	0	1		+		14014	14606	6728	6758	16694	16694					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.96	1	106.96	106.46	107.46	0								0	0	0	0.66264	1	45743	45743		0	0	1		+		14015	14606	6728	6758	16695	16695					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157226443291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.06	1	107.06	106.56	107.56	0								0	0	0	0.66264	1	45808	45808		0	0	1		+		14016	14606	6728	6758	16696	16696					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.16	1	107.16	106.66	107.66	0								0	0	0	0.66264	1	45874	45874		0	0	1		+		14017	14606	6728	6758	16697	16697					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.26	1	107.26	106.76	107.76	0								0	0	0	0.66264	1	45938	45938		0	0	1		+		14018	14606	6728	6758	16698	16698					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.36	1	107.36	106.86	107.86	0								0	0	0	0.66264	1	46002	46002		0	0	1		+		14019	14606	6728	6758	16699	16699					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.46	1	107.46	106.96	107.96	0								0	0	0	0.66264	1	46069	46069		0	0	1		+		14020	14606	6728	6758	16700	16700					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.56	1	107.56	107.06	108.06	0								0	0	0	0.66264	1	46133	46133		0	0	1		+		14021	14606	6728	6758	16701	16701					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.67	1	107.67	107.17	108.17	0								0	0	0	0.66264	1	46206	46206		0	0	1		+		14022	14606	6728	6758	16702	16702					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3152953982353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.01	1	108.01	107.51	108.51	0								0	0	0	0.66264	1	46450	46450		0	0	1		+		14023	14606	6728	6758	16703	16703					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3148376345634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.11	1	108.11	107.61	108.61	0								0	0	0	0.66264	1	46514	46514		0	0	1		+		14024	14606	6728	6758	16704	16704					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3154785037041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.22	1	108.22	107.72	108.72	0								0	0	0	0.66264	1	46589	46589		0	0	1		+		14025	14606	6728	6758	16705	16705					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.36	1	108.36	107.86	108.86	0								0	0	0	0.66264	1	46673	46673		0	0	1		+		14026	14606	6728	6758	16706	16706					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.45	1	108.45	107.95	108.95	0								0	0	0	0.66264	1	46736	46736		0	0	1		+		14027	14606	6728	6758	16707	16707					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.58	1	108.58	108.08	109.08	0								0	0	0	0.66264	1	46805	46805		0	0	1		+		14028	14606	6728	6758	16708	16708					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.68	1	108.68	108.18	109.18	0								0	0	0	0.66264	1	46870	46870		0	0	1		+		14029	14606	6728	6758	16709	16709					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.78	1	108.78	108.28	109.28	0								0	0	0	0.66264	1	46933	46933		0	0	1		+		14030	14606	6728	6758	16710	16710					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.87	1	108.87	108.37	109.37	0								0	0	0	0.66264	1	46998	46998		0	0	1		+		14031	14606	6728	6758	16711	16711					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.97	1	108.97	108.47	109.47	0								0	0	0	0.66264	1	47063	47063		0	0	1		+		14032	14606	6728	6758	16712	16712					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.08	1	109.08	108.58	109.58	0								0	0	0	0.66264	1	47128	47128		0	0	1		+		14033	14606	6728	6758	16713	16713					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.18	1	109.18	108.68	109.68	0								0	0	0	0.66264	1	47193	47193		0	0	1		+		14034	14606	6728	6758	16714	16714					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.29	1	109.29	108.79	109.79	0								0	0	0	0.66264	1	47258	47258		0	0	1		+		14035	14606	6728	6758	16715	16715					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.41	1	109.41	108.91	109.91	0								0	0	0	0.66264	1	47322	47322		0	0	1		+		14036	14606	6728	6758	16716	16716					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.51	1	109.51	109.01	110.01	0								0	0	0	0.66264	1	47388	47388		0	0	1		+		14037	14606	6728	6758	16717	16717					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3170349001884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.6	1	109.6	109.1	110.1	0								0	0	0	0.66264	1	47440	47440		0	0	1		+		14038	14606	6728	6758	16718	16718					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3170959353447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.7	1	109.7	109.2	110.2	0								0	0	0	0.66264	1	47492	47492		0	0	1		+		14039	14606	6728	6758	16719	16719					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3186828494072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.8	1	109.8	109.3	110.3	0								0	0	0	0.66264	1	47542	47542		0	0	1		+		14040	14606	6728	6758	16720	16720					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3186218142509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.9	1	109.9	109.4	110.4	0								0	0	0	0.66264	1	47583	47583		0	0	1		+		14041	14606	6728	6758	16721	16721					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3174621462822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.01	1	110.01	109.51	110.51	0								0	0	0	0.66264	1	47637	47637		0	0	1		+		14042	14606	6728	6758	16722	16722					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3152953982353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.14	109.64	110.64	0								0	0	0	0.66264	1	47691	47691		0	0	1		+		14043	14606	6728	6758	16723	16723					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3153259158134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.26	1	110.26	109.76	110.76	0								0	0	0	0.66264	1	47735	47735		0	0	1		+		14044	14606	6728	6758	16724	16724					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3154479861259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.39	1	110.39	109.89	110.89	0								0	0	0	0.66264	1	47783	47783		0	0	1		+		14045	14606	6728	6758	16725	16725					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.48	1	110.48	109.98	110.98	0								0	0	0	0.66264	1	47817	47817		0	0	1		+		14046	14606	6728	6758	16726	16726					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3150207400322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.57	1	110.57	110.07	111.07	0								0	0	0	0.66264	1	47854	47854		0	0	1		+		14047	14606	6728	6758	16727	16727					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3154785037041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.66	1	110.66	110.16	111.16	0								0	0	0	0.66264	1	47891	47891		0	0	1		+		14048	14606	6728	6758	16728	16728					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.77	1	110.77	110.27	111.27	0								0	0	0	0.66264	1	47931	47931		0	0	1		+		14049	14606	6728	6758	16729	16729					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.86	1	110.86	110.36	111.36	0								0	0	0	0.66264	1	47968	47968		0	0	1		+		14050	14606	6728	6758	16730	16730					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3151122927666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.96	1	110.96	110.46	111.46	0								0	0	0	0.66264	1	48009	48009		0	0	1		+		14051	14606	6728	6758	16731	16731					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3153564333916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.06	1	111.06	110.56	111.56	0								0	0	0	0.66264	1	48045	48045		0	0	1		+		14052	14606	6728	6758	16732	16732					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3152953982353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.15	1	111.15	110.65	111.65	0								0	0	0	0.66264	1	48081	48081		0	0	1		+		14053	14606	6728	6758	16733	16733					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3150207400322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.24	1	111.24	110.74	111.74	0								0	0	0	0.66264	1	48116	48116		0	0	1		+		14054	14606	6728	6758	16734	16734					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3153564333916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.33	1	111.33	110.83	111.83	0								0	0	0	0.66264	1	48152	48152		0	0	1		+		14055	14606	6728	6758	16735	16735					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3175231814384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.46	1	111.46	110.96	111.96	0								0	0	0	0.66264	1	48208	48208		0	0	1		+		14056	14606	6728	6758	16736	16736					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.59	1	111.59	111.09	112.09	0								0	0	0	0.66264	1	48265	48265		0	0	1		+		14057	14606	6728	6758	16737	16737					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.72	1	111.72	111.22	112.22	0								0	0	0	0.66264	1	48316	48316		0	0	1		+		14058	14606	6728	6758	16738	16738					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3173705935478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.84	1	111.84	111.34	112.34	0								0	0	0	0.66264	1	48368	48368		0	0	1		+		14059	14606	6728	6758	16739	16739					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3173705935478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.96	1	111.96	111.46	112.46	0								0	0	0	0.66264	1	48418	48418		0	0	1		+		14060	14606	6728	6758	16740	16740					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3170959353447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.07	1	112.07	111.57	112.57	0								0	0	0	0.66264	1	48461	48461		0	0	1		+		14061	14606	6728	6758	16741	16741					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.2	1	112.2	111.7	112.7	0								0	0	0	0.66264	1	48514	48514		0	0	1		+		14062	14606	6728	6758	16742	16742					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.33	1	112.33	111.83	112.83	0								0	0	0	0.66264	1	48566	48566		0	0	1		+		14063	14606	6728	6758	16743	16743					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.46	1	112.46	111.96	112.96	0								0	0	0	0.66264	1	48618	48618		0	0	1		+		14064	14606	6728	6758	16744	16744					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.59	1	112.59	112.09	113.09	0								0	0	0	0.66264	1	48671	48671		0	0	1		+		14065	14606	6728	6758	16745	16745					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3185607790947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.75	1	112.75	112.25	113.25	0								0	0	0	0.66264	1	48733	48733		0	0	1		+		14066	14606	6728	6758	16746	16746					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.94	1	112.94	112.44	113.44	0								0	0	0	0.66264	1	48811	48811		0	0	1		+		14067	14606	6728	6758	16747	16747					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165466189384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.07	1	113.07	112.57	113.57	0								0	0	0	0.66264	1	48862	48862		0	0	1		+		14068	14606	6728	6758	16748	16748					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.17	1	113.17	112.67	113.67	0								0	0	0	0.66264	1	48901	48901		0	0	1		+		14069	14606	6728	6758	16749	16749					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.3	1	113.3	112.8	113.8	0								0	0	0	0.66264	1	48953	48953		0	0	1		+		14070	14606	6728	6758	16750	16750					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.43	1	113.43	112.93	113.93	0								0	0	0	0.66264	1	49005	49005		0	0	1		+		14071	14606	6728	6758	16751	16751					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3172180056572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.53	1	113.53	113.03	114.03	0								0	0	0	0.66264	1	49046	49046		0	0	1		+		14072	14606	6728	6758	16752	16752					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.66	1	113.66	113.16	114.16	0								0	0	0	0.66264	1	49099	49099		0	0	1		+		14073	14606	6728	6758	16753	16753					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.79	1	113.79	113.29	114.29	0								0	0	0	0.66264	1	49149	49149		0	0	1		+		14074	14606	6728	6758	16754	16754					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.95	1	113.95	113.45	114.45	0								0	0	0	0.66264	1	49214	49214		0	0	1		+		14075	14606	6728	6758	16755	16755					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.08	1	114.08	113.58	114.58	0								0	0	0	0.66264	1	49266	49266		0	0	1		+		14076	14606	6728	6758	16756	16756					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.21	1	114.21	113.71	114.71	0								0	0	0	0.66264	1	49317	49317		0	0	1		+		14077	14606	6728	6758	16757	16757					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.34	1	114.34	113.84	114.84	0								0	0	0	0.66264	1	49371	49371		0	0	1		+		14078	14606	6728	6758	16758	16758					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.46	1	114.46	113.96	114.96	0								0	0	0	0.66264	1	49420	49420		0	0	1		+		14079	14606	6728	6758	16759	16759					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.57	1	114.57	114.07	115.07	0								0	0	0	0.66264	1	49463	49463		0	0	1		+		14080	14606	6728	6758	16760	16760					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.7	1	114.7	114.2	115.2	0								0	0	0	0.66264	1	49513	49513		0	0	1		+		14081	14606	6728	6758	16761	16761					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.82	1	114.82	114.32	115.32	0								0	0	0	0.66264	1	49564	49564		0	0	1		+		14082	14606	6728	6758	16762	16762					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.95	1	114.95	114.45	115.45	0								0	0	0	0.66264	1	49618	49618		0	0	1		+		14083	14606	6728	6758	16763	16763					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.12	1	115.12	114.62	115.62	0								0	0	0	0.66264	1	49686	49686		0	0	1		+		14084	14606	6728	6758	16764	16764					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.25	1	115.25	114.75	115.75	0								0	0	0	0.66264	1	49737	49737		0	0	1		+		14085	14606	6728	6758	16765	16765					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.37	1	115.37	114.87	115.87	0								0	0	0	0.66264	1	49789	49789		0	0	1		+		14086	14606	6728	6758	16766	16766					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.52	1	115.52	115.02	116.02	0								0	0	0	0.66264	1	49850	49850		0	0	1		+		14087	14606	6728	6758	16767	16767					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157226443291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.65	1	115.65	115.15	116.15	0								0	0	0	0.66264	1	49904	49904		0	0	1		+		14088	14606	6728	6758	16768	16768					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.78	1	115.78	115.28	116.28	0								0	0	0	0.66264	1	49955	49955		0	0	1		+		14089	14606	6728	6758	16769	16769					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.91	1	115.91	115.41	116.41	0								0	0	0	0.66264	1	50008	50008		0	0	1		+		14090	14606	6728	6758	16770	16770					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.03	1	116.03	115.53	116.53	0								0	0	0	0.66264	1	50060	50060		0	0	1		+		14091	14606	6728	6758	16771	16771					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.15	1	116.15	115.65	116.65	0								0	0	0	0.66264	1	50111	50111		0	0	1		+		14092	14606	6728	6758	16772	16772					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.28	1	116.28	115.78	116.78	0								0	0	0	0.66264	1	50165	50165		0	0	1		+		14093	14606	6728	6758	16773	16773					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.41	1	116.41	115.91	116.91	0								0	0	0	0.66264	1	50216	50216		0	0	1		+		14094	14606	6728	6758	16774	16774					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.85	1	116.85	116.35	117.35	0								0	0	0	0.66264	1	50396	50396		0	0	1		+		14095	14606	6728	6758	16775	16775					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3157226443291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.99	1	116.99	116.49	117.49	0								0	0	0	0.66264	1	50451	50451		0	0	1		+		14096	14606	6728	6758	16776	16776					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.12	1	117.12	116.62	117.62	0								0	0	0	0.66264	1	50502	50502		0	0	1		+		14097	14606	6728	6758	16777	16777					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.25	1	117.25	116.75	117.75	0								0	0	0	0.66264	1	50555	50555		0	0	1		+		14098	14606	6728	6758	16778	16778					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.37	1	117.37	116.87	117.87	0								0	0	0	0.66264	1	50607	50607		0	0	1		+		14099	14606	6728	6758	16779	16779					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.5	1	117.5	117	118	0								0	0	0	0.66264	1	50659	50659		0	0	1		+		14100	14606	6728	6758	16780	16780					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.63	1	117.63	117.13	118.13	0								0	0	0	0.66264	1	50710	50710		0	0	1		+		14101	14606	6728	6758	16781	16781					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.78	1	117.78	117.28	118.28	0								0	0	0	0.66264	1	50772	50772		0	0	1		+		14102	14606	6728	6758	16782	16782					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.92	1	117.92	117.42	118.42	0								0	0	0	0.66264	1	50828	50828		0	0	1		+		14103	14606	6728	6758	16783	16783					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.06	1	118.06	117.56	118.56	0								0	0	0	0.66264	1	50882	50882		0	0	1		+		14104	14606	6728	6758	16784	16784					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.17	1	118.17	117.67	118.67	0								0	0	0	0.66264	1	50928	50928		0	0	1		+		14105	14606	6728	6758	16785	16785					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.3	1	118.3	117.8	118.8	0								0	0	0	0.66264	1	50980	50980		0	0	1		+		14106	14606	6728	6758	16786	16786					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.43	1	118.43	117.93	118.93	0								0	0	0	0.66264	1	51030	51030		0	0	1		+		14107	14606	6728	6758	16787	16787					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.54	1	118.54	118.04	119.04	0								0	0	0	0.66264	1	51074	51074		0	0	1		+		14108	14606	6728	6758	16788	16788					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.67	1	118.67	118.17	119.17	0								0	0	0	0.66264	1	51127	51127		0	0	1		+		14109	14606	6728	6758	16789	16789					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.79	1	118.79	118.29	119.29	0								0	0	0	0.66264	1	51176	51176		0	0	1		+		14110	14606	6728	6758	16790	16790					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.92	1	118.92	118.42	119.42	0								0	0	0	0.66264	1	51228	51228		0	0	1		+		14111	14606	6728	6758	16791	16791					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.05	1	119.05	118.55	119.55	0								0	0	0	0.66264	1	51278	51278		0	0	1		+		14112	14606	6728	6758	16792	16792					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.14	1	119.14	118.64	119.64	0								0	0	0	0.66264	1	51317	51317		0	0	1		+		14113	14606	6728	6758	16793	16793					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.31	1	119.31	118.81	119.81	0								0	0	0	0.66264	1	51382	51382		0	0	1		+		14114	14606	6728	6758	16794	16794					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3165466189384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.43	1	119.43	118.93	119.93	0								0	0	0	0.66264	1	51434	51434		0	0	1		+		14115	14606	6728	6758	16795	16795					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.56	1	119.56	119.06	120.06	0								0	0	0	0.66264	1	51486	51486		0	0	1		+		14116	14606	6728	6758	16796	16796					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.69	1	119.69	119.19	120.19	0								0	0	0	0.66264	1	51536	51536		0	0	1		+		14117	14606	6728	6758	16797	16797					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.81	1	119.81	119.31	120.31	0								0	0	0	0.66264	1	51589	51589		0	0	1		+		14118	14606	6728	6758	16798	16798					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.95	1	119.95	119.45	120.45	0								0	0	0	0.66264	1	51643	51643		0	0	1		+		14119	14606	6728	6758	16799	16799					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2315	1	2.3541	1.8541	2.8541	0.12256								0	0	0	0.66264	1	919	919		0	0	1		+		14120	14606	6728	6758	16800	16800					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157226443291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3355	1	2.458	1.958	2.958	0.12256								0	0	0	0.66264	1	963	963		0	0	1		+		14121	14606	6728	6758	16801	16801					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4335	1	2.5561	2.0561	3.0561	0.12256								0	0	0	0.66264	1	1003	1003		0	0	1		+		14122	14606	6728	6758	16802	16802					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5431	1	2.6656	2.1656	3.1656	0.12256								0	0	0	0.66264	1	1048	1048		0	0	1		+		14123	14606	6728	6758	16803	16803					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6483	1	2.7709	2.2709	3.2709	0.12256								0	0	0	0.66264	1	1092	1092		0	0	1		+		14124	14606	6728	6758	16804	16804					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7549	1	2.8775	2.3775	3.3775	0.12256								0	0	0	0.66264	1	1136	1136		0	0	1		+		14125	14606	6728	6758	16805	16805					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8608	1	2.9834	2.4834	3.4834	0.12256								0	0	0	0.66264	1	1180	1180		0	0	1		+		14126	14606	6728	6758	16806	16806					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9759	1	3.0984	2.5984	3.5984	0.12256								0	0	0	0.66264	1	1228	1228		0	0	1		+		14127	14606	6728	6758	16807	16807					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9049	1	4.9929	4.4929	5.4929	0.08803								0	0	0	0.66264	1	2027	2027		0	0	1		+		14128	14606	6728	6758	16808	16808					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0004	1	5.0884	4.5884	5.5884	0.08803								0	0	0	0.66264	1	2067	2067		0	0	1		+		14129	14606	6728	6758	16809	16809					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.104	1	5.1921	4.6921	5.6921	0.08803								0	0	0	0.66264	1	2109	2109		0	0	1		+		14130	14606	6728	6758	16810	16810					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2017	1	5.2897	4.7897	5.7897	0.08803								0	0	0	0.66264	1	2149	2149		0	0	1		+		14131	14606	6728	6758	16811	16811					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2997	1	5.3878	4.8878	5.8878	0.08803								0	0	0	0.66264	1	2189	2189		0	0	1		+		14132	14606	6728	6758	16812	16812					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156616091728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3986	1	5.4866	4.9866	5.9866	0.08803								0	0	0	0.66264	1	2230	2230		0	0	1		+		14133	14606	6728	6758	16813	16813					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4984	1	5.5864	5.0864	6.0864	0.08803								0	0	0	0.66264	1	2272	2272		0	0	1		+		14134	14606	6728	6758	16814	16814					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5953	1	5.6815	5.1815	6.1815	0.086202								0	0	0	0.66264	1	2312	2312		0	0	1		+		14135	14606	6728	6758	16815	16815					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6987	1	5.7787	5.2787	6.2787	0.079923								0	0	0	0.66264	1	2355	2355		0	0	1		+		14136	14606	6728	6758	16816	16816					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8051	1	5.885	5.385	6.385	0.079923								0	0	0	0.66264	1	2399	2399		0	0	1		+		14137	14606	6728	6758	16817	16817					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8918	1	5.9717	5.4717	6.4717	0.079923								0	0	0	0.66264	1	2436	2436		0	0	1		+		14138	14606	6728	6758	16818	16818					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0007	1	6.0807	5.5807	6.5807	0.079923								0	0	0	0.66264	1	2481	2481		0	0	1		+		14139	14606	6728	6758	16819	16819					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0982	1	6.1781	5.6781	6.6781	0.079923								0	0	0	0.66264	1	2522	2522		0	0	1		+		14140	14606	6728	6758	16820	16820					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1987	1	6.2786	5.7786	6.7786	0.079923								0	0	0	0.66264	1	2563	2563		0	0	1		+		14141	14606	6728	6758	16821	16821					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2977	1	6.3777	5.8777	6.8777	0.079923								0	0	0	0.66264	1	2603	2603		0	0	1		+		14142	14606	6728	6758	16822	16822					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4015	1	6.4814	5.9814	6.9814	0.079923								0	0	0	0.66264	1	2646	2646		0	0	1		+		14143	14606	6728	6758	16823	16823					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5079	1	6.5878	6.0878	7.0878	0.079923								0	0	0	0.66264	1	2690	2690		0	0	1		+		14144	14606	6728	6758	16824	16824					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.606	1	6.686	6.186	7.186	0.079923								0	0	0	0.66264	1	2731	2731		0	0	1		+		14145	14606	6728	6758	16825	16825					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3151122927666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1183	1	8.1947	7.6947	8.6947	0.07632								0	0	0	0.66264	1	3360	3360		0	0	1		+		14146	14606	6728	6758	16826	16826					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157226443291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2151	1	8.2914	7.7914	8.7914	0.07632								0	0	0	0.66264	1	3401	3401		0	0	1		+		14147	14606	6728	6758	16827	16827					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3087	1	8.3851	7.8851	8.8851	0.07632								0	0	0	0.66264	1	3440	3440		0	0	1		+		14148	14606	6728	6758	16828	16828					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4031	1	8.4794	7.9794	8.9794	0.07632								0	0	0	0.66264	1	3479	3479		0	0	1		+		14149	14606	6728	6758	16829	16829					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4985	1	8.5748	8.0748	9.0748	0.07632								0	0	0	0.66264	1	3519	3519		0	0	1		+		14150	14606	6728	6758	16830	16830					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5937	1	8.67	8.17	9.17	0.07632								0	0	0	0.66264	1	3559	3559		0	0	1		+		14151	14606	6728	6758	16831	16831					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6892	1	8.7655	8.2655	9.2655	0.07632								0	0	0	0.66264	1	3599	3599		0	0	1		+		14152	14606	6728	6758	16832	16832					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3154479861259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.765	1	14.878	14.378	15.378	0.11295								0	0	0	0.66264	1	6127	6127		0	0	1		+		14153	14606	6728	6758	16833	16833					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.108	1	15.221	14.721	15.721	0.11295								0	0	0	0.66264	1	6270	6270		0	0	1		+		14154	14606	6728	6758	16834	16834					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.236	1	15.356	14.856	15.856	0.12072								0	0	0	0.66264	1	6324	6324		0	0	1		+		14155	14606	6728	6758	16835	16835					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3153564333916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.357	1	15.488	14.988	15.988	0.13022								0	0	0	0.66264	1	6373	6373		0	0	1		+		14156	14606	6728	6758	16836	16836					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.485	1	15.615	15.115	16.115	0.13022								0	0	0	0.66264	1	6426	6426		0	0	1		+		14157	14606	6728	6758	16837	16837					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.732	1	15.862	15.362	16.362	0.13022								0	0	0	0.66264	1	6528	6528		0	0	1		+		14158	14606	6728	6758	16838	16838					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.826	1	15.956	15.456	16.456	0.13022								0	0	0	0.66264	1	6568	6568		0	0	1		+		14159	14606	6728	6758	16839	16839					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.95	1	16.081	15.581	16.581	0.13022								0	0	0	0.66264	1	6620	6620		0	0	1		+		14160	14606	6728	6758	16840	16840					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.079	1	16.209	15.709	16.709	0.13022								0	0	0	0.66264	1	6675	6675		0	0	1		+		14161	14606	6728	6758	16841	16841					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.199	1	16.329	15.829	16.829	0.13022								0	0	0	0.66264	1	6724	6724		0	0	1		+		14162	14606	6728	6758	16842	16842					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156616091728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.489	1	16.64	16.14	17.14	0.15093								0	0	0	0.66264	1	6843	6843		0	0	1		+		14163	14606	6728	6758	16843	16843					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3149597048759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.597	1	16.748	16.248	17.248	0.15093								0	0	0	0.66264	1	6888	6888		0	0	1		+		14164	14606	6728	6758	16844	16844					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3144409060478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.707	1	16.858	16.358	17.358	0.15093								0	0	0	0.66264	1	6933	6933		0	0	1		+		14165	14606	6728	6758	16845	16845					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.816	1	16.967	16.467	17.467	0.15093								0	0	0	0.66264	1	6978	6978		0	0	1		+		14166	14606	6728	6758	16846	16846					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3149597048759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.936	1	17.087	16.587	17.587	0.15093								0	0	0	0.66264	1	7026	7026		0	0	1		+		14167	14606	6728	6758	16847	16847					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.065	1	17.215	16.715	17.715	0.15093								0	0	0	0.66264	1	7078	7078		0	0	1		+		14168	14606	6728	6758	16848	16848					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.379	1	17.529	17.029	18.029	0.15093								0	0	0	0.66264	1	7209	7209		0	0	1		+		14169	14606	6728	6758	16849	16849					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.719	1	17.892	17.392	18.392	0.17285								0	0	0	0.66264	1	7354	7354		0	0	1		+		14170	14606	6728	6758	16850	16850					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3152343630791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.851	1	35.151	34.651	35.651	0.29942								0	0	0	0.66264	1	14639	14639		0	0	1		+		14171	14606	6728	6758	16851	16851					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3152343630791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.415	1	36.717	36.217	37.217	0.30197								0	0	0	0.66264	1	15313	15313		0	0	1		+		14172	14606	6728	6758	16852	16852					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.517	1	36.819	36.319	37.319	0.30197								0	0	0	0.66264	1	15356	15356		0	0	1		+		14173	14606	6728	6758	16853	16853					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.613	1	36.915	36.415	37.415	0.30197								0	0	0	0.66264	1	15397	15397		0	0	1		+		14174	14606	6728	6758	16854	16854					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.889	1	37.191	36.691	37.691	0.30197								0	0	0	0.66264	1	15513	15513		0	0	1		+		14175	14606	6728	6758	16855	16855					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.707	1	54.03	53.53	54.53	0.32283								0	0	0	0.66264	1	22496	22496		0	0	1		+		14176	14606	6728	6758	16856	16856					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.053	1	54.373	53.873	54.873	0.32088								0	0	0	0.66264	1	22640	22640		0	0	1		+		14177	14606	6728	6758	16857	16857					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.156	1	54.477	53.977	54.977	0.32088								0	0	0	0.66264	1	22682	22682		0	0	1		+		14178	14606	6728	6758	16858	16858					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.283	1	54.603	54.103	55.103	0.32088								0	0	0	0.66264	1	22733	22733		0	0	1		+		14179	14606	6728	6758	16859	16859					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.434	1	54.755	54.255	55.255	0.32088								0	0	0	0.66264	1	22795	22795		0	0	1		+		14180	14606	6728	6758	16860	16860					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3152953982353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.739	1	55.06	54.56	55.56	0.32088								0	0	0	0.66264	1	22923	22923		0	0	1		+		14181	14606	6728	6758	16861	16861					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.849	1	55.17	54.67	55.67	0.32088								0	0	0	0.66264	1	22969	22969		0	0	1		+		14182	14606	6728	6758	16862	16862					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.194	1	55.515	55.015	56.015	0.32088								0	0	0	0.66264	1	23110	23110		0	0	1		+		14183	14606	6728	6758	16863	16863					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.314	1	55.634	55.134	56.134	0.32088								0	0	0	0.66264	1	23159	23159		0	0	1		+		14184	14606	6728	6758	16864	16864					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.275	1	56.597	56.097	57.097	0.32103								0	0	0	0.66264	1	23582	23582		0	0	1		+		14185	14606	6728	6758	16865	16865					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3171569705009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.845	1	57.166	56.666	57.666	0.32103								0	0	0	0.66264	1	23838	23838		0	0	1		+		14186	14606	6728	6758	16866	16866					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3143188357353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.887	1	63.217	62.717	63.717	0.32974								0	0	0	0.66264	1	26348	26348		0	0	1		+		14187	14606	6728	6758	16867	16867					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.116	1	63.445	62.945	63.945	0.32974								0	0	0	0.66264	1	26443	26443		0	0	1		+		14188	14606	6728	6758	16868	16868					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.266	1	63.596	63.096	64.096	0.32974								0	0	0	0.66264	1	26505	26505		0	0	1		+		14189	14606	6728	6758	16869	16869					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156310915947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.399	1	63.728	63.228	64.228	0.32929								0	0	0	0.66264	1	26560	26560		0	0	1		+		14190	14606	6728	6758	16870	16870					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.524	1	63.853	63.353	64.353	0.32899								0	0	0	0.66264	1	26611	26611		0	0	1		+		14191	14606	6728	6758	16871	16871					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.785	1	64.114	63.614	64.614	0.32899								0	0	0	0.66264	1	26727	26727		0	0	1		+		14192	14606	6728	6758	16872	16872					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.99	1	64.319	63.819	64.819	0.32899								0	0	0	0.66264	1	26811	26811		0	0	1		+		14193	14606	6728	6758	16873	16873					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3177368044853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.14	1	64.469	63.969	64.969	0.32899								0	0	0	0.66264	1	26872	26872		0	0	1		+		14194	14606	6728	6758	16874	16874					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.32	1	64.649	64.149	65.149	0.32899								0	0	0	0.66264	1	26945	26945		0	0	1		+		14195	14606	6728	6758	16875	16875					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3168517947197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.498	1	64.827	64.327	65.327	0.32899								0	0	0	0.66264	1	27016	27016		0	0	1		+		14196	14606	6728	6758	16876	16876					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.622	1	64.948	64.448	65.448	0.32689								0	0	0	0.66264	1	27067	27067		0	0	1		+		14197	14606	6728	6758	16877	16877					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.771	1	65.098	64.598	65.598	0.32689								0	0	0	0.66264	1	27130	27130		0	0	1		+		14198	14606	6728	6758	16878	16878					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.893	1	65.22	64.72	65.72	0.32689								0	0	0	0.66264	1	27180	27180		0	0	1		+		14199	14606	6728	6758	16879	16879					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3168517947197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.026	1	65.353	64.853	65.853	0.32689								0	0	0	0.66264	1	27233	27233		0	0	1		+		14200	14606	6728	6758	16880	16880					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3168823122978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.159	1	65.486	64.986	65.986	0.32689								0	0	0	0.66264	1	27287	27287		0	0	1		+		14201	14606	6728	6758	16881	16881					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.278	1	65.605	65.105	66.105	0.32689								0	0	0	0.66264	1	27336	27336		0	0	1		+		14202	14606	6728	6758	16882	16882					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3167907595634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.421	1	65.748	65.248	66.248	0.32689								0	0	0	0.66264	1	27394	27394		0	0	1		+		14203	14606	6728	6758	16883	16883					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.918	1	66.243	65.743	66.743	0.32449								0	0	0	0.66264	1	27600	27600		0	0	1		+		14204	14606	6728	6758	16884	16884					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.99	1	73.315	72.815	73.815	0.32494								0	0	0	0.66264	1	30532	30532		0	0	1		+		14205	14606	6728	6758	16885	16885					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.403	1	73.728	73.228	74.228	0.32494								0	0	0	0.66264	1	30711	30711		0	0	1		+		14206	14606	6728	6758	16886	16886					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.524	1	73.849	73.349	74.349	0.32494								0	0	0	0.66264	1	30761	30761		0	0	1		+		14207	14606	6728	6758	16887	16887					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.655	1	73.98	73.48	74.48	0.32494								0	0	0	0.66264	1	30815	30815		0	0	1		+		14208	14606	6728	6758	16888	16888					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.841	1	74.165	73.665	74.665	0.32494								0	0	0	0.66264	1	30890	30890		0	0	1		+		14209	14606	6728	6758	16889	16889					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.827	1	75.152	74.652	75.652	0.32464								0	0	0	0.66264	1	31298	31298		0	0	1		+		14210	14606	6728	6758	16890	16890					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.982	1	75.306	74.806	75.806	0.32464								0	0	0	0.66264	1	31363	31363		0	0	1		+		14211	14606	6728	6758	16891	16891					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3162719607353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.099	1	75.424	74.924	75.924	0.32464								0	0	0	0.66264	1	31411	31411		0	0	1		+		14212	14606	6728	6758	16892	16892					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3168212771416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.236	1	75.561	75.061	76.061	0.32464								0	0	0	0.66264	1	31467	31467		0	0	1		+		14213	14606	6728	6758	16893	16893					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.36	1	75.685	75.185	76.185	0.32464								0	0	0	0.66264	1	31517	31517		0	0	1		+		14214	14606	6728	6758	16894	16894					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.638	1	75.96	75.46	76.46	0.32163								0	0	0	0.66264	1	31634	31634		0	0	1		+		14215	14606	6728	6758	16895	16895					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.765	1	76.087	75.587	76.587	0.32163								0	0	0	0.66264	1	31687	31687		0	0	1		+		14216	14606	6728	6758	16896	16896					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.893	1	76.215	75.715	76.715	0.32163								0	0	0	0.66264	1	31739	31739		0	0	1		+		14217	14606	6728	6758	16897	16897					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.953	1	77.269	76.769	77.769	0.31653								0	0	0	0.66264	1	32182	32182		0	0	1		+		14218	14606	6728	6758	16898	16898					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.074	1	77.391	76.891	77.891	0.31653								0	0	0	0.66264	1	32232	32232		0	0	1		+		14219	14606	6728	6758	16899	16899					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.199	1	77.515	77.015	78.015	0.31653								0	0	0	0.66264	1	32284	32284		0	0	1		+		14220	14606	6728	6758	16900	16900					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.324	1	77.641	77.141	78.141	0.31653								0	0	0	0.66264	1	32336	32336		0	0	1		+		14221	14606	6728	6758	16901	16901					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.454	1	77.771	77.271	78.271	0.31653								0	0	0	0.66264	1	32389	32389		0	0	1		+		14222	14606	6728	6758	16902	16902					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.609	1	77.925	77.425	78.425	0.31653								0	0	0	0.66264	1	32454	32454		0	0	1		+		14223	14606	6728	6758	16903	16903					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.742	1	78.059	77.559	78.559	0.31653								0	0	0	0.66264	1	32509	32509		0	0	1		+		14224	14606	6728	6758	16904	16904					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.916	1	89.139	88.639	89.639	0.22359								0	0	0	0.66264	1	37275	37275		0	0	1		+		14225	14606	6728	6758	16905	16905					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3171264529228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.052	1	89.276	88.776	89.776	0.22359								0	0	0	0.66264	1	37330	37330		0	0	1		+		14226	14606	6728	6758	16906	16906					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.271	1	89.495	88.995	89.995	0.22359								0	0	0	0.66264	1	37419	37419		0	0	1		+		14227	14606	6728	6758	16907	16907					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3179199099541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.421	1	89.645	89.145	90.145	0.22359								0	0	0	0.66264	1	37480	37480		0	0	1		+		14228	14606	6728	6758	16908	16908					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165466189384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.541	1	89.764	89.264	90.264	0.22359								0	0	0	0.66264	1	37528	37528		0	0	1		+		14229	14606	6728	6758	16909	16909					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3172485232353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.786	1	90.009	89.509	90.509	0.22359								0	0	0	0.66264	1	37627	37627		0	0	1		+		14230	14606	6728	6758	16910	16910					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.916	1	90.125	89.625	90.625	0.20904								0	0	0	0.66264	1	37680	37680		0	0	1		+		14231	14606	6728	6758	16911	16911					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.041	1	90.25	89.75	90.75	0.20904								0	0	0	0.66264	1	37730	37730		0	0	1		+		14232	14606	6728	6758	16912	16912					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165466189384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.195	1	90.404	89.904	90.904	0.20904								0	0	0	0.66264	1	37793	37793		0	0	1		+		14233	14606	6728	6758	16913	16913					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.322	1	90.531	90.031	91.031	0.20904								0	0	0	0.66264	1	37847	37847		0	0	1		+		14234	14606	6728	6758	16914	16914					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.508	1	90.717	90.217	91.217	0.20904								0	0	0	0.66264	1	37926	37926		0	0	1		+		14235	14606	6728	6758	16915	16915					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3173095583916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.499	1	91.69	91.19	92.19	0.19042								0	0	0	0.66264	1	38325	38325		0	0	1		+		14236	14606	6728	6758	16916	16916					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.661	1	91.851	91.351	92.351	0.19042								0	0	0	0.66264	1	38390	38390		0	0	1		+		14237	14606	6728	6758	16917	16917					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.823	1	92.013	91.513	92.513	0.19042								0	0	0	0.66264	1	38455	38455		0	0	1		+		14238	14606	6728	6758	16918	16918					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.987	1	92.178	91.678	92.678	0.19042								0	0	0	0.66264	1	38522	38522		0	0	1		+		14239	14606	6728	6758	16919	16919					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.11	1	92.3	91.8	92.8	0.19042								0	0	0	0.66264	1	38571	38571		0	0	1		+		14240	14606	6728	6758	16920	16920					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.559	1	92.727	92.227	93.227	0.16835								0	0	0	0.66264	1	38760	38760		0	0	1		+		14241	14606	6728	6758	16921	16921					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3185607790947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.276	1	95.399	94.899	95.899	0.12331								0	0	0	0.66264	1	39868	39868		0	0	1		+		14242	14606	6728	6758	16922	16922					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3182250857353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.16	1	96.265	95.765	96.765	0.105								0	0	0	0.66264	1	40243	40243		0	0	1		+		14243	14606	6728	6758	16923	16923					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3174316287041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.342	1	96.447	95.947	96.947	0.105								0	0	0	0.66264	1	40315	40315		0	0	1		+		14244	14606	6728	6758	16924	16924					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2461	1	1.8994	1.3994	2.3994	0.65331								0	0	0	0.66264	1	510	510		0	0	1		+		14245	14606	6728	6758	16925	16925					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3577	1	2.011	1.511	2.511	0.65331								0	0	0	0.66264	1	556	556		0	0	1		+		14246	14606	6728	6758	16926	16926					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.459	1	2.1123	1.6123	2.6123	0.65331								0	0	0	0.66264	1	598	598		0	0	1		+		14247	14606	6728	6758	16927	16927					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2498	1	6.8711	6.3711	7.3711	0.62127								0	0	0	0.66264	1	2582	2582		0	0	1		+		14248	14606	6728	6758	16928	16928					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3612	1	6.9825	6.4825	7.4825	0.62127								0	0	0	0.66264	1	2627	2627		0	0	1		+		14249	14606	6728	6758	16929	16929					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4603	1	7.0816	6.5816	7.5816	0.62127								0	0	0	0.66264	1	2669	2669		0	0	1		+		14250	14606	6728	6758	16930	16930					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3153259158134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5578	1	7.1791	6.6791	7.6791	0.62127								0	0	0	0.66264	1	2710	2710		0	0	1		+		14251	14606	6728	6758	16931	16931					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6556	1	7.2769	6.7769	7.7769	0.62127								0	0	0	0.66264	1	2751	2751		0	0	1		+		14252	14606	6728	6758	16932	16932					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7652	1	7.3924	6.8924	7.8924	0.62713								0	0	0	0.66264	1	2796	2796		0	0	1		+		14253	14606	6728	6758	16933	16933					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154479861259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8571	1	7.4842	6.9842	7.9842	0.62713								0	0	0	0.66264	1	2835	2835		0	0	1		+		14254	14606	6728	6758	16934	16934					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9634	1	7.5905	7.0905	8.0905	0.62713								0	0	0	0.66264	1	2879	2879		0	0	1		+		14255	14606	6728	6758	16935	16935					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0689	1	7.6961	7.1961	8.1961	0.62713								0	0	0	0.66264	1	2924	2924		0	0	1		+		14256	14606	6728	6758	16936	16936					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1642	1	7.7913	7.2913	8.2913	0.62713								0	0	0	0.66264	1	2964	2964		0	0	1		+		14257	14606	6728	6758	16937	16937					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2589	1	7.886	7.386	8.386	0.62713								0	0	0	0.66264	1	3003	3003		0	0	1		+		14258	14606	6728	6758	16938	16938					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.36	1	7.9872	7.4872	8.4872	0.62713								0	0	0	0.66264	1	3045	3045		0	0	1		+		14259	14606	6728	6758	16939	16939					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4571	1	8.0842	7.5842	8.5842	0.62713								0	0	0	0.66264	1	3086	3086		0	0	1		+		14260	14606	6728	6758	16940	16940					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154785037041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5672	1	8.1943	7.6943	8.6943	0.62713								0	0	0	0.66264	1	3132	3132		0	0	1		+		14261	14606	6728	6758	16941	16941					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6646	1	8.2917	7.7917	8.7917	0.62713								0	0	0	0.66264	1	3172	3172		0	0	1		+		14262	14606	6728	6758	16942	16942					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7663	1	8.3935	7.8935	8.8935	0.62713								0	0	0	0.66264	1	3214	3214		0	0	1		+		14263	14606	6728	6758	16943	16943					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.52	1	18.418	17.918	18.918	0.89794								0	0	0	0.66264	1	7292	7292		0	0	1		+		14264	14606	6728	6758	16944	16944					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.625	1	18.545	18.045	19.045	0.91947								0	0	0	0.66264	1	7336	7336		0	0	1		+		14265	14606	6728	6758	16945	16945					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.861	1	18.841	18.341	19.341	0.97922								0	0	0	0.66264	1	7436	7436		0	0	1		+		14266	14606	6728	6758	16946	16946					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.166	1	19.145	18.645	19.645	0.97922								0	0	0	0.66264	1	7564	7564		0	0	1		+		14267	14606	6728	6758	16947	16947					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.27	1	19.249	18.749	19.749	0.97922								0	0	0	0.66264	1	7607	7607		0	0	1		+		14268	14606	6728	6758	16948	16948					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.392	1	19.371	18.871	19.871	0.97922								0	0	0	0.66264	1	7658	7658		0	0	1		+		14269	14606	6728	6758	16949	16949					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.839	1	29.118	28.618	29.618	1.2789								0	0	0	0.66264	1	11666	11666		0	0	1		+		14270	14606	6728	6758	16950	16950					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.994	1	29.273	28.773	29.773	1.2789								0	0	0	0.66255	1	11732	11732		0.13989	0.13989	1		+		14271	14606	6728	6758	16951	16951					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.115	1	29.394	28.894	29.894	1.2789								0	0	0	0.66264	1	11784	11784		0	0	1		+		14272	14606	6728	6758	16952	16952					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.238	1	29.516	29.016	30.016	1.2789								0	0	0	0.66264	1	11837	11837		0	0	1		+		14273	14606	6728	6758	16953	16953					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.352	1	29.631	29.131	30.131	1.2789								0	0	0	0.66264	1	11886	11886		0	0	1		+		14274	14606	6728	6758	16954	16954					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.539	1	29.819	29.319	30.319	1.2803								0	0	0	0.66264	1	11965	11965		0	0	1		+		14275	14606	6728	6758	16955	16955					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.654	1	29.936	29.436	30.436	1.2825								0	0	0	0.66264	1	12014	12014		0	0	1		+		14276	14606	6728	6758	16956	16956					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3149291872978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.887	1	30.169	29.669	30.669	1.2825								0	0	0	0.66264	1	12113	12113		0	0	1		+		14277	14606	6728	6758	16957	16957					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.064	1	30.347	29.847	30.847	1.2825								0	0	0	0.66264	1	12189	12189		0	0	1		+		14278	14606	6728	6758	16958	16958					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.22	1	30.503	30.003	31.003	1.2825								0	0	0	0.66264	1	12256	12256		0	0	1		+		14279	14606	6728	6758	16959	16959					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.011	1	37.287	36.787	37.787	1.2762								0	0	0	0.66264	1	15118	15118		0	0	1		+		14280	14606	6728	6758	16960	16960					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.152	1	37.428	36.928	37.928	1.2762								0	0	0	0.66264	1	15176	15176		0	0	1		+		14281	14606	6728	6758	16961	16961					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155395388603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.511	1	38.795	38.295	39.295	1.284								0	0	0	0.66264	1	15748	15748		0	0	1		+		14282	14606	6728	6758	16962	16962					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.208	1	60.628	60.128	61.128	1.4196								0	0	0	0.66264	1	24827	24827		0	0	1		+		14283	14606	6728	6758	16963	16963					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.545	1	60.965	60.465	61.465	1.4196								0	0	0	0.66264	1	24968	24968		0	0	1		+		14284	14606	6728	6758	16964	16964					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.921	1	66.32	65.82	66.82	1.3989								0	0	0	0.66264	1	27229	27229		0	0	1		+		14285	14606	6728	6758	16965	16965					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.057	1	66.456	65.956	66.956	1.3989								0	0	0	0.66264	1	27284	27284		0	0	1		+		14286	14606	6728	6758	16966	16966					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3167907595634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.27	1	66.669	66.169	67.169	1.3989								0	0	0	0.66264	1	27373	27373		0	0	1		+		14287	14606	6728	6758	16967	16967					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.431	1	66.83	66.33	67.33	1.3989								0	0	0	0.66264	1	27441	27441		0	0	1		+		14288	14606	6728	6758	16968	16968					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3161804080009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.884	1	67.283	66.783	67.783	1.3989								0	0	0	0.66254	1	27632	27632		0.15932	0	1		+		14289	14606	6728	6758	16969	16969					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3152038455009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.092	1	67.481	66.981	67.981	1.3888								0	0	0	0.66264	1	27723	27723		0	0	1		+		14290	14606	6728	6758	16970	16970					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3167297244072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.22	1	67.609	67.109	68.109	1.3888								0	0	0	0.66264	1	27779	27779		0	0	1		+		14291	14606	6728	6758	16971	16971					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166686892509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.537	1	67.926	67.426	68.426	1.3888								0	0	0	0.66264	1	27913	27913		0	0	1		+		14292	14606	6728	6758	16972	16972					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.643	1	68.032	67.532	68.532	1.3888								0	0	0	0.66264	1	27958	27958		0	0	1		+		14293	14606	6728	6758	16973	16973					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.775	1	68.164	67.664	68.664	1.3888								0	0	0	0.66264	1	28012	28012		0	0	1		+		14294	14606	6728	6758	16974	16974					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166076540947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.896	1	68.285	67.785	68.785	1.3888								0	0	0	0.66264	1	28062	28062		0	0	1		+		14295	14606	6728	6758	16975	16975					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.633	1	69.011	68.511	69.511	1.3778								0	0	0	0.66264	1	28374	28374		0	0	1		+		14296	14606	6728	6758	16976	16976					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.805	1	69.183	68.683	69.683	1.3778								0	0	0	0.66264	1	28450	28450		0	0	1		+		14297	14606	6728	6758	16977	16977					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166076540947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.791	1	75.109	74.609	75.609	1.318								0	0	0	0.66264	1	30964	30964		0	0	1		+		14298	14606	6728	6758	16978	16978					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3171569705009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.913	1	75.231	74.731	75.731	1.318								0	0	0	0.66264	1	31016	31016		0	0	1		+		14299	14606	6728	6758	16979	16979					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3168517947197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.372	1	75.69	75.19	76.19	1.318								0	0	0	0.66264	1	31209	31209		0	0	1		+		14300	14606	6728	6758	16980	16980					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.52	1	75.838	75.338	76.338	1.318								0	0	0	0.66264	1	31274	31274		0	0	1		+		14301	14606	6728	6758	16981	16981					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166686892509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.639	1	75.946	75.446	76.446	1.3063								0	0	0	0.66264	1	31326	31326		0	0	1		+		14302	14606	6728	6758	16982	16982					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.792	1	76.098	75.598	76.598	1.3063								0	0	0	0.66264	1	31391	31391		0	0	1		+		14303	14606	6728	6758	16983	16983					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.109	1	76.415	75.915	76.915	1.3063								0	0	0	0.66264	1	31522	31522		0	0	1		+		14304	14606	6728	6758	16984	16984					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.243	1	76.55	76.05	77.05	1.3063								0	0	0	0.66264	1	31581	31581		0	0	1		+		14305	14606	6728	6758	16985	16985					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170959353447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.47	1	76.776	76.276	77.276	1.3063								0	0	0	0.66264	1	31677	31677		0	0	1		+		14306	14606	6728	6758	16986	16986					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3162109255791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.009	1	78.29	77.79	78.79	1.2809								0	0	0	0.66264	1	32327	32327		0	0	1		+		14307	14606	6728	6758	16987	16987					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.203	1	78.484	77.984	78.984	1.2809								0	0	0	0.66264	1	32405	32405		0	0	1		+		14308	14606	6728	6758	16988	16988					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3169128298759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.48	1	78.761	78.261	79.261	1.2809								0	0	0	0.66264	1	32519	32519		0	0	1		+		14309	14606	6728	6758	16989	16989					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3167907595634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.615	1	78.896	78.396	79.396	1.2809								0	0	0	0.66264	1	32574	32574		0	0	1		+		14310	14606	6728	6758	16990	16990					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.742	1	79.023	78.523	79.523	1.2809								0	0	0	0.66264	1	32626	32626		0	0	1		+		14311	14606	6728	6758	16991	16991					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.925	1	79.206	78.706	79.706	1.2809								0	0	0	0.66264	1	32704	32704		0	0	1		+		14312	14606	6728	6758	16992	16992					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.255	1	79.522	79.022	80.022	1.2668								0	0	0	0.66264	1	32847	32847		0	0	1		+		14313	14606	6728	6758	16993	16993					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3168212771416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.528	1	79.795	79.295	80.295	1.2668								0	0	0	0.66264	1	32964	32964		0	0	1		+		14314	14606	6728	6758	16994	16994					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.957	1	80.224	79.724	80.724	1.2668								0	0	0	0.66264	1	33143	33143		0	0	1		+		14315	14606	6728	6758	16995	16995					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.122	1	80.389	79.889	80.889	1.2668								0	0	0	0.66264	1	33212	33212		0	0	1		+		14316	14606	6728	6758	16996	16996					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.241	1	80.508	80.008	81.008	1.2668								0	0	0	0.66264	1	33261	33261		0	0	1		+		14317	14606	6728	6758	16997	16997					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163940310478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.364	1	80.631	80.131	81.131	1.2668								0	0	0	0.66264	1	33312	33312		0	0	1		+		14318	14606	6728	6758	16998	16998					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.559	1	80.811	80.311	81.311	1.2512								0	0	0	0.66264	1	33394	33394		0	0	1		+		14319	14606	6728	6758	16999	16999					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166076540947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.427	1	83.64	83.14	84.14	1.2125								0	0	0	0.66264	1	34601	34601		0	0	1		+		14320	14606	6728	6758	17000	17000					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.591	1	83.803	83.303	84.303	1.2125								0	0	0	0.66264	1	34667	34667		0	0	1		+		14321	14606	6728	6758	17001	17001					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.711	1	83.924	83.424	84.424	1.2125								0	0	0	0.66264	1	34717	34717		0	0	1		+		14322	14606	6728	6758	17002	17002					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3169738650322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.838	1	84.05	83.55	84.55	1.2125								0	0	0	0.66264	1	34769	34769		0	0	1		+		14323	14606	6728	6758	17003	17003					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.958	1	84.171	83.671	84.671	1.2125								0	0	0	0.66264	1	34821	34821		0	0	1		+		14324	14606	6728	6758	17004	17004					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.072	1	84.26	83.76	84.76	1.1879								0	0	0	0.66264	1	34871	34871		0	0	1		+		14325	14606	6728	6758	17005	17005					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3173400759697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.204	1	84.392	83.892	84.892	1.1879								0	0	0	0.66264	1	34925	34925		0	0	1		+		14326	14606	6728	6758	17006	17006					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3168823122978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.363	1	84.551	84.051	85.051	1.1879								0	0	0	0.66264	1	34990	34990		0	0	1		+		14327	14606	6728	6758	17007	17007					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.765	1	84.952	84.452	85.452	1.1879								0	0	0	0.66264	1	35154	35154		0	0	1		+		14328	14606	6728	6758	17008	17008					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3147155642509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.097	1	85.285	84.785	85.785	1.1879								0	0	0	0.66264	1	35290	35290		0	0	1		+		14329	14606	6728	6758	17009	17009					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3159667849541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.596	1	85.755	85.255	86.255	1.159								0	0	0	0.66264	1	35497	35497		0	0	1		+		14330	14606	6728	6758	17010	17010					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.706	1	85.865	85.365	86.365	1.159								0	0	0	0.66264	1	35543	35543		0	0	1		+		14331	14606	6728	6758	17011	17011					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.907	1	86.066	85.566	86.566	1.159								0	0	0	0.66264	1	35629	35629		0	0	1		+		14332	14606	6728	6758	17012	17012					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3139221072197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.053	1	86.212	85.712	86.712	1.159								0	0	0	0.66264	1	35690	35690		0	0	1		+		14333	14606	6728	6758	17013	17013					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3152038455009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.595	1	87.722	87.222	88.222	1.1265								0	0	0	0.66264	1	36497	36497		0	0	1		+		14334	14606	6728	6758	17014	17014					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.025	1	88.116	87.616	88.616	1.0918								0	0	0	0.66264	1	36703	36703		0	0	1		+		14335	14606	6728	6758	17015	17015					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3181335330009	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.158	1	88.249	87.749	88.749	1.0918								0	0	0	0.66264	1	36759	36759		0	0	1		+		14336	14606	6728	6758	17016	17016					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3177368044853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.407	1	88.499	87.999	88.999	1.0918								0	0	0	0.66264	1	36863	36863		0	0	1		+		14337	14606	6728	6758	17017	17017					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3184692263603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.552	1	88.644	88.144	89.144	1.0918								0	0	0	0.66264	1	36925	36925		0	0	1		+		14338	14606	6728	6758	17018	17018					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3179809451103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.681	1	88.773	88.273	89.273	1.0918								0	0	0	0.66264	1	36979	36979		0	0	1		+		14339	14606	6728	6758	17019	17019					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3177368044853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.816	1	88.908	88.408	89.408	1.0918								0	0	0	0.66264	1	37034	37034		0	0	1		+		14340	14606	6728	6758	17020	17020					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3179504275322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.935	1	88.991	88.491	89.491	1.0562								0	0	0	0.66264	1	37083	37083		0	0	1		+		14341	14606	6728	6758	17021	17021					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3182250857353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.166	1	89.222	88.722	89.722	1.0562								0	0	0	0.66264	1	37177	37177		0	0	1		+		14342	14606	6728	6758	17022	17022					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3189880251884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.346	1	89.402	88.902	89.902	1.0562								0	0	0	0.66264	1	37250	37250		0	0	1		+		14343	14606	6728	6758	17023	17023					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3176757693291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.488	1	89.544	89.044	90.044	1.0562								0	0	0	0.66264	1	37307	37307		0	0	1		+		14344	14606	6728	6758	17024	17024					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3175231814384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.644	1	89.7	89.2	90.2	1.0562								0	0	0	0.66264	1	37370	37370		0	0	1		+		14345	14606	6728	6758	17025	17025					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3176147341728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.77	1	89.826	89.326	90.326	1.0562								0	0	0	0.66264	1	37421	37421		0	0	1		+		14346	14606	6728	6758	17026	17026					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170349001884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.893	1	89.949	89.449	90.449	1.0562								0	0	0	0.66264	1	37470	37470		0	0	1		+		14347	14606	6728	6758	17027	17027					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3179504275322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.024	1	90.081	89.581	90.581	1.0562								0	0	0	0.66264	1	37523	37523		0	0	1		+		14348	14606	6728	6758	17028	17028					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3173095583916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.152	1	90.172	89.672	90.672	1.0199								0	0	0	0.66264	1	37575	37575		0	0	1		+		14349	14606	6728	6758	17029	17029					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170654177666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.282	1	90.302	89.802	90.802	1.0199								0	0	0	0.66264	1	37627	37627		0	0	1		+		14350	14606	6728	6758	17030	17030					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3183166384697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.415	1	90.435	89.935	90.935	1.0199								0	0	0	0.66264	1	37681	37681		0	0	1		+		14351	14606	6728	6758	17031	17031					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170349001884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.698	1	90.718	90.218	91.218	1.0199								0	0	0	0.66264	1	37799	37799		0	0	1		+		14352	14606	6728	6758	17032	17032					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3171874880791	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.186	1	93.122	92.622	93.622	0.93623								0	0	0	0.66264	1	38825	38825		0	0	1		+		14353	14606	6728	6758	17033	17033					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3178588747978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.309	1	93.246	92.746	93.746	0.93623								0	0	0	0.66264	1	38874	38874		0	0	1		+		14354	14606	6728	6758	17034	17034					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.429	1	93.365	92.865	93.865	0.93623								0	0	0	0.66264	1	38921	38921		0	0	1		+		14355	14606	6728	6758	17035	17035					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.54	1	93.476	92.976	93.976	0.93623								0	0	0	0.66264	1	38965	38965		0	0	1		+		14356	14606	6728	6758	17036	17036					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.678	1	93.615	93.115	94.115	0.93623								0	0	0	0.66264	1	39021	39021		0	0	1		+		14357	14606	6728	6758	17037	17037					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3172180056572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.803	1	93.675	93.175	94.175	0.87176								0	0	0	0.66264	1	39070	39070		0	0	1		+		14358	14606	6728	6758	17038	17038					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.928	1	93.8	93.3	94.3	0.87176								0	0	0	0.66264	1	39120	39120		0	0	1		+		14359	14606	6728	6758	17039	17039					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3178588747978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.058	1	93.93	93.43	94.43	0.87176								0	0	0	0.66264	1	39171	39171		0	0	1		+		14360	14606	6728	6758	17040	17040					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3187133669853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.838	1	96.259	95.759	96.759	0.4212								0	0	0	0.66264	1	40331	40331		0	0	1		+		14361	14606	6728	6758	17041	17041					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.32	109.82	110.82	0.16133								0	0	0	0.66264	1	47861	47861		0	0	1		+		14362	14606	6728	6758	17042	17042					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.28	1	110.44	109.94	110.94	0.16133								0	0	0	0.66264	1	47908	47908		0	0	1		+		14363	14606	6728	6758	17043	17043					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.549	1	12.311	11.811	12.811	0.76165								0	0	0	0.66264	1	4796	4796		0	0	1		+		14364	14606	6728	6758	17044	17044					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.652	1	12.414	11.914	12.914	0.76165								0	0	0	0.66264	1	4838	4838		0	0	1		+		14365	14606	6728	6758	17045	17045					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.776	1	12.563	12.063	13.063	0.78751								0	0	0	0.66264	1	4889	4889		0	0	1		+		14366	14606	6728	6758	17046	17046					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3144103884697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.701	1	16.74	16.24	17.24	1.0392								0	0	0	0.66264	1	6514	6514		0	0	1		+		14367	14606	6728	6758	17047	17047					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3142883181572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.79	1	16.829	16.329	17.329	1.0392								0	0	0	0.66264	1	6553	6553		0	0	1		+		14368	14606	6728	6758	17048	17048					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.896	1	16.935	16.435	17.435	1.0392								0	0	0	0.66264	1	6597	6597		0	0	1		+		14369	14606	6728	6758	17049	17049					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16	1	17.04	16.54	17.54	1.0392								0	0	0	0.66264	1	6641	6641		0	0	1		+		14370	14606	6728	6758	17050	17050					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3154479861259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.332	1	17.371	16.871	17.871	1.0392								0	0	0	0.66264	1	6783	6783		0	0	1		+		14371	14606	6728	6758	17051	17051					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158752322197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.456	1	17.495	16.995	17.995	1.0392								0	0	0	0.66264	1	6834	6834		0	0	1		+		14372	14606	6728	6758	17052	17052					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.547	1	32.362	31.862	32.862	1.8151								0	0	0	0.66264	1	12804	12804		0	0	1		+		14373	14606	6728	6758	17053	17053					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.667	1	32.482	31.982	32.982	1.8151								0	0	0	0.66264	1	12854	12854		0	0	1		+		14374	14606	6728	6758	17054	17054					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.806	1	32.621	32.121	33.121	1.8151								0	0	0	0.66264	1	12913	12913		0	0	1		+		14375	14606	6728	6758	17055	17055					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.008	1	32.827	32.327	33.327	1.8194								0	0	0	0.66264	1	12998	12998		0	0	1		+		14376	14606	6728	6758	17056	17056					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.126	1	32.951	32.451	33.451	1.8246								0	0	0	0.66264	1	13048	13048		0	0	1		+		14377	14606	6728	6758	17057	17057					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.247	1	33.072	32.572	33.572	1.8246								0	0	0	0.66264	1	13099	13099		0	0	1		+		14378	14606	6728	6758	17058	17058					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.357	1	33.182	32.682	33.682	1.8246								0	0	0	0.66264	1	13145	13145		0	0	1		+		14379	14606	6728	6758	17059	17059					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.469	1	33.293	32.793	33.793	1.8246								0	0	0	0.66264	1	13192	13192		0	0	1		+		14380	14606	6728	6758	17060	17060					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3145019412041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.601	1	33.425	32.925	33.925	1.8246								0	0	0	0.66264	1	13247	13247		0	0	1		+		14381	14606	6728	6758	17061	17061					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3153564333916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.051	1	36.869	36.369	37.369	1.8176								0	0	0	0.66264	1	14696	14696		0	0	1		+		14382	14606	6728	6758	17062	17062					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3145324587822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.575	1	37.393	36.893	37.893	1.8176								0	0	0	0.66264	1	14919	14919		0	0	1		+		14383	14606	6728	6758	17063	17063					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3152648806572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.735	1	37.552	37.052	38.052	1.8176								0	0	0	0.66264	1	14986	14986		0	0	1		+		14384	14606	6728	6758	17064	17064					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3153259158134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.919	1	37.737	37.237	38.237	1.8176								0	0	0	0.66264	1	15064	15064		0	0	1		+		14385	14606	6728	6758	17065	17065					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.024	1	37.842	37.342	38.342	1.8176								0	0	0	0.66264	1	15107	15107		0	0	1		+		14386	14606	6728	6758	17066	17066					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3156005740166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.18	1	37.998	37.498	38.498	1.8176								0	0	0	0.66264	1	15171	15171		0	0	1		+		14387	14606	6728	6758	17067	17067					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.732	1	53.704	53.204	54.204	1.9722								0	0	0	0.66264	1	21678	21678		0	0	1		+		14388	14606	6728	6758	17068	17068					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3147155642509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.792	1	54.762	54.262	55.262	1.9703								0	0	0	0.66264	1	22115	22115		0	0	1		+		14389	14606	6728	6758	17069	17069					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3150817751884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.323	1	55.293	54.793	55.793	1.9697								0	0	0	0.66264	1	22341	22341		0	0	1		+		14390	14606	6728	6758	17070	17070					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.59	1	55.56	55.06	56.06	1.9697								0	0	0	0.66264	1	22453	22453		0	0	1		+		14391	14606	6728	6758	17071	17071					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3160278201103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.744	1	55.714	55.214	56.214	1.9697								0	0	0	0.66264	1	22517	22517		0	0	1		+		14392	14606	6728	6758	17072	17072					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.869	1	57.837	57.337	58.337	1.9684								0	0	0	0.66264	1	23429	23429		0	0	1		+		14393	14606	6728	6758	17073	17073					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.131	1	58.099	57.599	58.599	1.9684								0	0	0	0.66264	1	23540	23540		0	0	1		+		14394	14606	6728	6758	17074	17074					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.345	1	58.313	57.813	58.813	1.9684								0	0	0	0.66264	1	23630	23630		0	0	1		+		14395	14606	6728	6758	17075	17075					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3161193728447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.47	1	60.439	59.939	60.939	1.969								0	0	0	0.66264	1	24526	24526		0	0	1		+		14396	14606	6728	6758	17076	17076					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.356	1	61.325	60.825	61.825	1.969								0	0	0	0.66264	1	24903	24903		0	0	1		+		14397	14606	6728	6758	17077	17077					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.439	1	70.309	69.809	70.809	1.87								0	0	0	0.66264	1	28712	28712		0	0	1		+		14398	14606	6728	6758	17078	17078					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3153564333916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.615	1	70.468	69.968	70.968	1.853								0	0	0	0.66264	1	28786	28786		0	0	1		+		14399	14606	6728	6758	17079	17079					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3151428103447	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.777	1	70.63	70.13	71.13	1.853								0	0	0	0.66264	1	28856	28856		0	0	1		+		14400	14606	6728	6758	17080	17080					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.128	1	70.981	70.481	71.481	1.853								0	0	0	0.66264	1	29008	29008		0	0	1		+		14401	14606	6728	6758	17081	17081					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3167602419853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.246	1	71.099	70.599	71.599	1.853								0	0	0	0.66264	1	29057	29057		0	0	1		+		14402	14606	6728	6758	17082	17082					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164855837822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.071	1	79.823	79.323	80.323	1.7514								0	0	0	0.66264	1	32743	32743		0	0	1		+		14403	14606	6728	6758	17083	17083					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3157531619072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.189	1	79.928	79.428	80.428	1.7387								0	0	0	0.66264	1	32793	32793		0	0	1		+		14404	14606	6728	6758	17084	17084					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.381	1	80.116	79.616	80.616	1.735								0	0	0	0.66264	1	32873	32873		0	0	1		+		14405	14606	6728	6758	17085	17085					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163635134697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.529	1	80.264	79.764	80.764	1.735								0	0	0	0.66264	1	32935	32935		0	0	1		+		14406	14606	6728	6758	17086	17086					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3160583376884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.66	1	80.395	79.895	80.895	1.735								0	0	0	0.66264	1	32990	32990		0	0	1		+		14407	14606	6728	6758	17087	17087					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.509	1	81.225	80.725	81.725	1.7167								0	0	0	0.66264	1	33347	33347		0	0	1		+		14408	14606	6728	6758	17088	17088					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.639	1	81.356	80.856	81.856	1.7167								0	0	0	0.66264	1	33402	33402		0	0	1		+		14409	14606	6728	6758	17089	17089					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3156921267509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.793	1	81.51	81.01	82.01	1.7167								0	0	0	0.66264	1	33467	33467		0	0	1		+		14410	14606	6728	6758	17090	17090					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.923	1	81.639	81.139	82.139	1.7167								0	0	0	0.66264	1	33521	33521		0	0	1		+		14411	14606	6728	6758	17091	17091					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3165771365166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.125	1	81.841	81.341	82.341	1.7167								0	0	0	0.66264	1	33606	33606		0	0	1		+		14412	14606	6728	6758	17092	17092					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3154479861259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.319	1	82.035	81.535	82.535	1.7167								0	0	0	0.66264	1	33692	33692		0	0	1		+		14413	14606	6728	6758	17093	17093					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3148986697197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.434	1	82.15	81.65	82.65	1.7167								0	0	0	0.66264	1	33743	33743		0	0	1		+		14414	14606	6728	6758	17094	17094					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.641	1	82.337	81.837	82.837	1.6959								0	0	0	0.66264	1	33831	33831		0	0	1		+		14415	14606	6728	6758	17095	17095					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.767	1	82.463	81.963	82.963	1.6959								0	0	0	0.66264	1	33884	33884		0	0	1		+		14416	14606	6728	6758	17096	17096					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3142883181572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.324	1	85.921	85.421	86.421	1.5962								0	0	0	0.66264	1	35367	35367		0	0	1		+		14417	14606	6728	6758	17097	17097					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3168517947197	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.916	1	93.243	92.743	93.743	1.3269								0	0	0	0.66264	1	38701	38701		0	0	1		+		14418	14606	6728	6758	17098	17098					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3170654177666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.04	1	93.367	92.867	93.867	1.3269								0	0	0	0.66264	1	38751	38751		0	0	1		+		14419	14606	6728	6758	17099	17099					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3171264529228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.14	1	93.467	92.967	93.967	1.3269								0	0	0	0.66264	1	38791	38791		0	0	1		+		14420	14606	6728	6758	17100	17100					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3182250857353	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.235	1	93.562	93.062	94.062	1.3269								0	0	0	0.66264	1	38829	38829		0	0	1		+		14421	14606	6728	6758	17101	17101					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3167297244072	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.331	1	93.658	93.158	94.158	1.3269								0	0	0	0.66264	1	38867	38867		0	0	1		+		14422	14606	6728	6758	17102	17102					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3173705935478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.436	1	93.762	93.262	94.262	1.3269								0	0	0	0.66264	1	38908	38908		0	0	1		+		14423	14606	6728	6758	17103	17103					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.557	1	93.884	93.384	94.384	1.3269								0	0	0	0.66264	1	38957	38957		0	0	1		+		14424	14606	6728	6758	17104	17104					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164550662041	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.667	1	93.963	93.463	94.463	1.2961								0	0	0	0.66264	1	39001	39001		0	0	1		+		14425	14606	6728	6758	17105	17105					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.792	1	94.069	93.569	94.569	1.277								0	0	0	0.66264	1	39051	39051		0	0	1		+		14426	14606	6728	6758	17106	17106					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3172790408134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.916	1	94.193	93.693	94.693	1.277								0	0	0	0.66264	1	39102	39102		0	0	1		+		14427	14606	6728	6758	17107	17107					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3169433474541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.074	1	94.351	93.851	94.851	1.277								0	0	0	0.66264	1	39167	39167		0	0	1		+		14428	14606	6728	6758	17108	17108					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3169738650322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.469	1	94.746	94.246	95.246	1.277								0	0	0	0.66264	1	39328	39328		0	0	1		+		14429	14606	6728	6758	17109	17109					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3162414431572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.62	1	94.897	94.397	95.397	1.277								0	0	0	0.66264	1	39393	39393		0	0	1		+		14430	14606	6728	6758	17110	17110					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3148681521416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.737	1	95.014	94.514	95.514	1.277								0	0	0	0.66264	1	39442	39442		0	0	1		+		14431	14606	6728	6758	17111	17111					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.86	1	95.137	94.637	95.637	1.277								0	0	0	0.66264	1	39494	39494		0	0	1		+		14432	14606	6728	6758	17112	17112					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3166992068291	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.992	1	95.18	94.68	95.68	1.1887								0	0	0	0.66264	1	39548	39548		0	0	1		+		14433	14606	6728	6758	17113	17113					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3170349001884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.12	1	95.309	94.809	95.809	1.1887								0	0	0	0.66264	1	39600	39600		0	0	1		+		14434	14606	6728	6758	17114	17114					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3185607790947	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.256	1	95.445	94.945	95.945	1.1887								0	0	0	0.66264	1	39655	39655		0	0	1		+		14435	14606	6728	6758	17115	17115					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3161498904228	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.382	1	95.571	95.071	96.071	1.1887								0	0	0	0.66264	1	39706	39706		0	0	1		+		14436	14606	6728	6758	17116	17116					0.3054822610070005
KKKKKKVKKI	10	Unmodified	_KKKKKKVKKI_					0	0	0			REV__PTPN12-RSBN1L|4|fusion	REV__PTPN12-RSBN1L|4|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3182861208916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.696	1	96.098	95.598	96.598	0.40208								0	0	0	0.66264	1	40264	40264		0	0	1		+		14437	14606	6728	6758	17117	17117					0.3054822610070005
KKKKKKVQ	8	Unmodified	_KKKKKKVQ_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1014.72227782011	1	1014.71461	1013.70733	-0.15086	-0.00015308	1.5647	0.0015877	1.4138	0.0014346	1014.7154264286457	34.301	0.048973	35.576	35.538	35.587	1.2746					5	4	2	0	0	0	2.3239	1	14386	14386		2.5775	0	1	11781000			14438	7142	6729	6759	17118	17118					0.20102884635889495
KKKKKKVQ	8	Unmodified	_KKKKKKVQ_					0	0	0		ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1014.71461	1013.70733	1.5105	0.0015327	8.5418	0.0086675	10.052	0.0102	1015.7267577241432	35.503	0.040668	35.503	35.485	35.526	0	-0.036596	0.0030714	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8226800			14439	7142	6729	6759							0.20102884635889495
KKKKKLFF	8	Unmodified	_KKKKKLFF_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2439147830009	3	356.2427	1065.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.971	1	99.052	98.552	99.552	0.080376								0	0	0	1.0178	1	41435	41435		0	0	1		+		14440	12042	6730	6760	17119	17119					0.17604670266996436
KKKKKLFF	8	Unmodified	_KKKKKLFF_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2440673708916	3	356.2427	1065.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.39	1	101.46	100.96	101.96	0.067009								0	0	0	1.0178	1	42452	42452		0	0	1		+		14441	12042	6730	6760	17120	17120					0.17604670266996436
KKKKKPPH	8	Unmodified	_KKKKKPPH_					0	0	0			REV__ENST00000357731.9_1_1:72748195-72748351:-|nuORF	REV__ENST00000357731.9_1_1:72748195-72748351:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.8341857790947	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.12	1	118.28	117.78	118.78	0.16237								0	0	0	1.0178	1	51002	51002		0.69038	0.088878	1		+		14442	12565	6731	6761	17121	17121					0.15458042430316254
KKKKKRFSF	9	Unmodified	_KKKKKRFSF_					0	0	0		ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	ENSG00000277443|ENST00000612661|MARCKS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	400.0454589724541	3	399.592392	1195.75535	0.93443	0.00037339	0.065993	2.637E-05	1.0004	0.00039976	399.59237498422635	24.282	0.30867	25.523	25.392	25.701	1.241					14	9	2	0	0	0	0.11955	1	10201	10201		0.23584	0.23584	1	977420			14443	5473	6732	6762	17122	17122					0.16529958555929625
KKKKKRGKKK	10	Unmodified	_KKKKKRGKKK_					0	0	0		ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9559814333916	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.76	1	103.76	103.26	104.26	0								0	0	0	0.6624	1	43635	43635		0.40072	0	1				14444	718	6733	6763	17123	17123					0.27513287155352373
KKKKKSVP	8	Unmodified	_KKKKKSVP_					0	0	0			REV__AluJb_dup10104|chr1:206072830-206073136:-|1.3794957716104348|0.0558356921634704|4.63|415.0|5|1|sense	REV__AluJb_dup10104|chr1:206072830-206073136:-|1.3794957716104348|0.0558356921634704|4.63|415.0|5|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	942.6423828005791	1	942.645862	941.638586	3.4483	0.0032506	-2.9564	-0.0027869	0.4919	0.00046369	942.6452349867503	109.55	0.22974	109.71	109.6	109.83	0.1548					13	8	2	0	0	0	0.89176	1	47507	47507		0.79363	0.10326	1	4304200	+		14445	8099	6734	6764	17124	17124					0.16543220336177455
KKKKKVKKKA	10	Unmodified	_KKKKKVKKKA_					0	0	0			REV__tr|A0A7D7A1I0|A0A7D7A1I0_9CLOTFlavinreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04290PE=3SV=1	REV__tr|A0A7D7A1I0|A0A7D7A1I0_9CLOTFlavinreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04290PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.2999450564384	3	405.299209	1212.8758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.15	1	106.15	105.65	106.65	0								0	0	0	0.66264	1	45227	45227		0	0	1		+		14446	15825	6735	6765	17125	17125					0.27787366549569015
KKKKLKKKHHL	11	Unmodified	_KKKKLKKKHHL_					0	0	0			REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4902221560478	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.96	1	109.11	108.61	109.61	0.1548								0	0	0	0.63775	1	47153	47153		0	0	1		+		14447	8107	6736	6766	17126	17126					0.27037531735209086
KKKKLKKKHHL	11	Unmodified	_KKKKLKKKHHL_					0	0	0			REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4907104372978	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.06	1	109.21	108.71	109.71	0.1548								0	0	0	0.63775	1	47215	47215		0	0	1		+		14448	8107	6736	6766	17127	17127					0.27037531735209086
KKKKLKKKHHL	11	Unmodified	_KKKKLKKKHHL_					0	0	0			REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4899169802666	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.16	1	109.32	108.82	109.82	0.1548								0	0	0	0.63775	1	47281	47281		0	0	1		+		14449	8107	6736	6766	17128	17128					0.27037531735209086
KKKKLKKKHHL	11	Unmodified	_KKKKLKKKHHL_					0	0	0			REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4907104372978	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.26	1	109.42	108.92	109.92	0.1548								0	0	0	0.63775	1	47347	47347		0	0	1		+		14450	8107	6736	6766	17129	17129					0.27037531735209086
KKKKLKKKHHL	11	Unmodified	_KKKKLKKKHHL_					0	0	0			REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	REV__AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4943115115166	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.5	1	109.66	109.16	110.16	0.1548								0	0	0	0.63775	1	47483	47483		0	0	1		+		14451	8107	6736	6766	17130	17130					0.27037531735209086
KKKKNRSHK	9	Unmodified	_KKKKNRSHK_					0	0	0		nc|ENSG00000234545|Q5BKY9-2|FAM133B;ENSG00000234545|ENST00000445716|FAM133B;ENST00000481407.5_1_7:92191598-92207100:-|nuORF	nc|ENSG00000234545|Q5BKY9-2|FAM133B	nc|ENSG00000234545|Q5BKY9-2|FAM133B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1554748415947	3	385.247396	1152.72036	4.4377	0.0017096	-0.80007	-0.00030823	3.6377	0.0014014	385.24694735085563	87.252	0.46387	88.747	88.487	88.951	1.4953					40	14	4	0	0	0	0.11954	1	36710	36710		0.26902	0	1	5482200			14452	5312	6737	6767	17131	17131					0.15010715747962422
KKKKRKAK	8	Unmodified	_KKKKRKAK_					0	0	0			REV__tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	REV__tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	508.3484069705009	2	507.86656	1013.71857	1.4568	0.00073985	1.6141	0.00081972	3.0708	0.0015596	507.86740651223255	107.39	0.83967	107.39	106.97	107.81	0					90	42	3	0	0	0	2.3239	1	45758	45758		0.69038	0.69038	1	12931000	+		14453	14884	6738	6768	17132	17132					0.21225706730024285
KKKKRKKKTK	10	Unmodified	_KKKKRKKKTK_					0	0	0		nc|ENSG00000187624|Q6ZQX7-2|LIAT1;ENSG00000187624|ENST00000360127|C17orf97;nc|ENSG00000187624|Q6ZQX7-3|LIAT1;nc|ENSG00000187624|Q6ZQX7|LIAT1	nc|ENSG00000187624|Q6ZQX7-2|LIAT1	nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9684326052666	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.26	1	105.42	104.92	105.92	0.16679								0	0	0	0.66237	1	44727	44727		0.45834	0	1				14454	4832	6739	6769	17133	17133					0.2810955632680816
KKKKTGTR	8	Unmodified	_KKKKTGTR_					0	0	0		ENST00000377474.3_1_13:77455936-77455996:-|nuORF	ENST00000377474.3_1_13:77455936-77455996:-|nuORF	ENST00000377474.3_1_13:77455936-77455996:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	316.2106201052666	3	316.210059	945.608348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.23	1	102.4	101.9	102.9	0.17032								0	0	0	1.0178	1	43023	43023		0	0	1				14455	6198	6740	6770	17134	17134					0.13336861671007227
KKKKTGTR	8	Unmodified	_KKKKTGTR_					0	0	0		ENST00000377474.3_1_13:77455936-77455996:-|nuORF	ENST00000377474.3_1_13:77455936-77455996:-|nuORF	ENST00000377474.3_1_13:77455936-77455996:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.2113830447197	3	316.210059	945.608348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.95	1	105.12	104.62	105.62	0.16679								0	0	0	1.0178	1	44538	44538		0	0	1				14456	6198	6740	6770	17135	17135					0.13336861671007227
KKKKTKKK	8	Unmodified	_KKKKTKKK_					0	0	0		ENST00000360264.7_1_7:101898640-101898772:+|nuORF	ENST00000360264.7_1_7:101898640-101898772:+|nuORF	ENST00000360264.7_1_7:101898640-101898772:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	340.2097656130791	3	339.581605	1015.72298	0.90984	0.00030896	1.0447	0.00035477	1.9546	0.00066373	339.91656543757296	49.657	0.27708	51.049	50.826	51.103	1.3911					10	8	2	0	0	0	2.3239	1	20745	20745		0	0	1	412590			14457	6025	6741	6771	17136	17136					0.21575171152949224
KKKKTKQKI	9	Unmodified	_KKKKTKQKI_					0	0	0			REV__L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	REV__L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1129.782275378704	1	1129.77794	1128.77066	1.3526	0.0015282	1.599	0.0018065	2.9516	0.0033347	1129.7794937326187	104.78	0.5249	104.78	104.36	104.88	0					52	27	2	0	0	0	0.85403	1	44309	44309		0	0	1	24167000	+		14458	14269	6742	6772	17137	17137					0.2114282535314942
KKKKTKQKIIL	11	Unmodified	_KKKKTKQKIIL_					0	0	0			REV__L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	REV__L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	678.4849120974541	2	678.476672	1354.93879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.68	1	117.84	117.34	118.34	0.15606								0	0	0	0.63775	1	50825	50825		0	0	1		+		14459	14269	6743	6773	17138	17138					0.2755188754695155
KKKKTTRLKKR	11	Unmodified	_KKKKTTRLKKR_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.3283874392509	3	472.327938	1413.96199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.17	1	101.35	100.85	101.85	0.18047								0	0	0	0.63775	1	42571	42571		0.094841	0	1		+		14460	9333	6744	6774	17139	17139					0.2715632638421539
KKKKVPLLFVK	11	Unmodified	_KKKKVPLLFVK_					0	0	0			REV__SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	REV__SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	664.4646484255791	2	664.463033	1326.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.1	1	110.15	109.65	110.65	0.048843								0	0	0	0.63775	1	47513	47513		0	0	1		+		14461	14673	6745	6775	17140	17140					0.26113404006537166
KKKKVPLLFVK	11	Unmodified	_KKKKVPLLFVK_					0	0	0			REV__SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	REV__SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	664.4669677615166	2	664.463033	1326.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.26	1	113.43	112.93	113.93	0.16914								0	0	0	0.63775	1	49110	49110		0	0	1		+		14462	14673	6745	6775	17141	17141					0.26113404006537166
KKKLFFRA	8	Unmodified	_KKKLFFRA_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.2592651247978	3	346.5588	1036.65457	1.5043	0.00052132	0.54665	0.00018945	2.0509	0.00071077	346.5592298629657	64.43	0.82705	64.759	64.369	65.196	0.32899					57	25	3	0	0	0	2.3239	1	27066	27066		0	0	1	1581900	+		14463	12042	6746	6776	17142	17142					0.13770926573079123
KKKLFFRA	8	Unmodified	_KKKLFFRA_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5592834353447	3	346.5588	1036.65457	0.084614	2.9324E-05	1.5875	0.00055018	1.6722	0.0005795	346.55942167765664	23.811	0.71254	25.052	24.897	25.609	1.241					29	22	3	0	0	0	0.89187	1	9959	9959		0.40072	0	1	511010	+		14464	12042	6746	6776	17143	17143					0.13770926573079123
KKKLFFRA	8	Unmodified	_KKKLFFRA_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	346.5588	1036.65457	-1.9781	-0.00068552	3.0055	0.0010416	1.0274	0.00035607	346.5596138256959	25.597	0.37102	25.597	25.347	25.718	0	0.35909	0.0011297	NaN	0.40072	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	435800	+		14465	12042	6746	6776							0.13770926573079123
KKKLFFRA	8	Unmodified	_KKKLFFRA_					0	0	0			REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	REV__ENST00000078429.8_1_19:3121435-3121495:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	346.5588	1036.65457	0.44955	0.0001558	1.3891	0.00048142	1.8387	0.00063722	346.5593086244733	24.966	0.55527	25.218	25.119	25.675	0.25197	-0.019817	-0.0005508	NaN	0.40072	30	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	605880	+		14466	12042	6746	6776							0.13770926573079123
KKKLFLKRKF	10	Unmodified	_KKKLFLKRKF_					0	0	0		ENST00000342992.10_3_2:179540701-179542581:-|nuORF	ENST00000342992.10_3_2:179540701-179542581:-|nuORF	ENST00000342992.10_3_2:179540701-179542581:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	334.4780761599541	4	334.730138	1334.89145	-0.040617	-1.3596E-05	-1.4654	-0.00049052	-1.506	-0.00050411	334.7295067750665	26.201	1.1675	27.473	27.153	28.321	1.2715					59	37	2	0	0	0	0.12561	1	11214	11214		0.13989	0.056541	1	2550900			14467	5945	6747	6777	17144	17144					0.23739653066581923
KKKLIGTP	8	Unmodified	_KKKLIGTP_					0	0	0			REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	884.5959960818291	1	884.592764	883.585488	1.1598	0.0010259	2.3252	0.0020569	3.485	0.0030828	884.5945735141407	106.22	0.17194	106.22	106.13	106.31	0					24	8	4	0	0	0	0.89178	1	45254	45254		0.69038	0	1	136650000	+		14468	13489	6748	6778	17145	17145					0.1390384255353183
KKKLIGTP	8	Unmodified	_KKKLIGTP_					0	0	0			REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	884.5939819216728	1	884.592764	883.585488	2.8048	0.0024811	0.49968	0.00044201	3.3044	0.0029231	884.592845055601	106.18	0.18047	106.24	106.15	106.33	0.05455					24	8	4	0	0	0	0.89178	1	45170	45170		0.69038	0	1	130370000	+		14469	13489	6748	6778	17146	17146					0.1390384255353183
KKKLIGTP	8	Unmodified	_KKKLIGTP_					0	0	0			REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	884.592764	883.585488	1.1598	0.0010259	2.3252	0.0020569	3.485	0.0030828	884.5945735141407	106.22	0.17194	106.22	106.13	106.31	0	0.020323	0.00074764	NaN	0.69038	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136650000	+		14470	13489	6748	6778							0.1390384255353183
KKKLIGTP	8	Unmodified	_KKKLIGTP_					0	0	0			REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	884.592764	883.585488	2.8048	0.0024811	0.49968	0.00044201	3.3044	0.0029231	884.592845055601	106.18	0.18047	106.24	106.15	106.33	0.05455	0.037833	-0.00086722	NaN	0.69038	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130370000	+		14471	13489	6748	6778							0.1390384255353183
KKKLIGTP	8	Unmodified	_KKKLIGTP_					0	0	0			REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	REV__ENST00000498157.1_1_1:109815480-109816293:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	884.592764	883.585488	3.121	0.0027608	1.2492	0.001105	4.3701	0.0038658	884.5943586238385	105.98	0.097046	106.14	106.09	106.19	0.16174	-0.058157	-0.00020423	NaN	0.69038	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10055000	+		14472	13489	6748	6778							0.1390384255353183
KKKLIHIHYRL	11	Unmodified	_KKKLIHIHYRL_					0	0	0			REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9863769412041	4	362.98577	1447.91397	1.1597	0.00042097	0.46377	0.00016834	1.6235	0.00058931	362.9860576598574	34.963	1.2235	35.263	34.602	35.825	0.29942					301	82	4	0	0	0	1.0402	2	14711	14711;14913		0.094841	0	1	314680000	+		14473	15599	6749	6779	17147;17148	17147					0.20793252464227407
KKKLIHIHYRL	11	Unmodified	_KKKLIHIHYRL_					0	0	0			REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9860717654228	4	362.98577	1447.91397	0.45921	0.00016669	0.63003	0.00022869	1.0892	0.00039538	362.9860279302442	33.018	1.1002	34.843	34.092	35.193	1.8246					257	70	5	0	0	0	1.0402	2	13795	13795;13909		0.094841	0	1	942270000	+		14474	15599	6749	6779	17149;17150	17149					0.20793252464227407
KKKLIHIHYRL	11	Unmodified	_KKKLIHIHYRL_					0	0	0			REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	REV__tr|A0A7D6W1Y6|A0A7D6W1Y6_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_04465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	362.9860107302666	4	362.98577	1447.91397	0.45921	0.00016669	0.63003	0.00022869	1.0892	0.00039538	362.9860279302442	33.018	1.1002	34.843	34.092	35.193	1.8246					257	70	5	0	0	0	0.14606	1	13909	13909		0.094841	0	1	942270000	+		14475	15599	6749	6779	17151	17151					0.20793252464227407
KKKLISKKIKK	11	Unmodified	_KKKLISKKIKK_					0	0	0			REV__tr|A0A553SJ43|A0A553SJ43_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16070PE=4SV=1	REV__tr|A0A553SJ43|A0A553SJ43_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	671.5075561404228	2	671.48704	1340.95953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.238	1	97.522	97.022	98.022	0.28442								0	0	0	0.63775	1	40915	40915		0.30703	0	1		+		14476	14881	6750	6780	17152	17152					0.3026847792659737
KKKLKKKLVRS	11	Unmodified	_KKKLKKKLVRS_					0	0	0		nc|ENSG00000135541|Q8N157-3|AHI1;nc|ENSG00000135541|Q8N157-2|AHI1;ENSG00000135541|ENST00000265602|AHI1	nc|ENSG00000135541|Q8N157-3|AHI1	nc|ENSG00000135541|Q8N157-3|AHI1	MSMS	GG20161007_CRH_Patient100_W632_01	3	678.4857055544853	2	678.482289	1354.95002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.65	1	111.81	111.31	112.31	0.16445								0	0	0	0.63775	1	48452	48452		0.26902	0.26902	1				14477	2674	6751	6781	17153	17153					0.286747096410636
KKKLKKSRFR	10	Unmodified	_KKKLKKSRFR_					0	0	0		ENSG00000125772|ENST00000379019|GPCPD1	ENSG00000125772|ENST00000379019|GPCPD1	ENSG00000125772|ENST00000379019|GPCPD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	440.3013793826103	3	440.297979	1317.87211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.97	103.47	104.47	0.1731								0	0	0	0.66254	1	43793	43793		0.15932	0	1				14478	2277	6752	6782	17154	17154					0.22588696775687822
KKKLKNLKKSL	11	Unmodified	_KKKLKNLKKSL_					0	0	0		tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	tr|A0A7D6W2P7|A0A7D6W2P7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	664.4619018435478	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.27	1	108.32	107.82	108.82	0.050644								0	0	0	0.63775	1	46513	46513		0	0	1				14479	17037	6753	6783	17155	17155					0.2571131451286419
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3487121462822	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.013	1	92.013	91.513	92.513	0								0	0	0	1.0178	1	38450	38450		0.69038	0	1				14480	4470	6754	6784	17156	17156					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3487731814384	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.139	1	92.139	91.639	92.639	0								0	0	0	1.0178	1	38503	38503		0.69038	0	1				14481	4470	6754	6784	17157	17157					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3485595583916	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.196	1	93.196	92.696	93.696	0								0	0	0	1.0178	1	38953	38953		0.69038	0	1				14482	4470	6754	6784	17158	17158					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3490478396416	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.323	1	93.323	92.823	93.823	0								0	0	0	1.0178	1	39006	39006		0.69038	0	1				14483	4470	6754	6784	17159	17159					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3486816287041	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.455	1	93.455	92.955	93.955	0								0	0	0	1.0178	1	39059	39059		0.69038	0	1				14484	4470	6754	6784	17160	17160					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3488036990166	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.582	1	93.582	93.082	94.082	0								0	0	0	1.0178	1	39111	39111		0.69038	0	1				14485	4470	6754	6784	17161	17161					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3487121462822	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.74	1	93.74	93.24	94.24	0								0	0	0	1.0178	1	39176	39176		0.69038	0	1				14486	4470	6754	6784	17162	17162					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3483154177666	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.882	1	93.882	93.382	94.382	0								0	0	0	1.0178	1	39234	39234		0.69038	0	1				14487	4470	6754	6784	17163	17163					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3483459353447	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.997	1	93.997	93.497	94.497	0								0	0	0	1.0178	1	39282	39282		0.69038	0	1				14488	4470	6754	6784	17164	17164					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3486816287041	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.115	1	94.115	93.615	94.615	0								0	0	0	1.0178	1	39331	39331		0.69038	0	1				14489	4470	6754	6784	17165	17165					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3491088747978	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.242	1	94.242	93.742	94.742	0								0	0	0	1.0178	1	39384	39384		0.69038	0	1				14490	4470	6754	6784	17166	17166					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3474609255791	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.431	1	94.431	93.931	94.931	0								0	0	0	1.0178	1	39465	39465		0.69038	0	1				14491	4470	6754	6784	17167	17167					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3494445681572	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.545	1	94.545	94.045	95.045	0								0	0	0	1.0178	1	39513	39513		0.69038	0	1				14492	4470	6754	6784	17168	17168					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3494750857353	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.673	1	94.673	94.173	95.173	0								0	0	0	1.0178	1	39567	39567		0.69038	0	1				14493	4470	6754	6784	17169	17169					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3489868044853	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.804	1	94.804	94.304	95.304	0								0	0	0	1.0178	1	39622	39622		0.69038	0	1				14494	4470	6754	6784	17170	17170					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3487121462822	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.266	1	95.266	94.766	95.766	0								0	0	0	1.0178	1	39813	39813		0.69038	0	1				14495	4470	6754	6784	17171	17171					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3505737185478	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.52	1	95.52	95.02	96.02	0								0	0	0	1.0178	1	39925	39925		0.69038	0	1				14496	4470	6754	6784	17172	17172					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3492309451103	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.469	1	96.469	95.969	96.969	0								0	0	0	1.0178	1	40326	40326		0.69038	0	1				14497	4470	6754	6784	17173	17173					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3479797244072	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.582	1	96.582	96.082	97.082	0								0	0	0	1.0178	1	40372	40372		0.69038	0	1				14498	4470	6754	6784	17174	17174					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3484374880791	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.802	1	96.802	96.302	97.302	0								0	0	0	1.0178	1	40469	40469		0.69038	0	1				14499	4470	6754	6784	17175	17175					0.18231195744567685
KKKLPQKK	8	Unmodified	_KKKLPQKK_					0	0	0		ENST00000483741.1_1_1:44684093-44685454:+|nuORF;ENSG00000178028|ENST00000372289|DMAP1	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	ENST00000483741.1_1_1:44684093-44685454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3530761599541	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.441	1	95.862	95.362	96.362	0.4212								0	0	0	1.0178	1	40165	40165		0.69038	0	1				14500	4470	6754	6784	17176	17176					0.18231195744567685
KKKMKLMIL	9	Unmodified	_KKKMKLMIL_					0	0	0			REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2487670779228	3	378.248469	1131.72358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.38	1	108.38	107.88	108.88	0								0	0	0	0.42693	1	46687	46687		0.26902	0	1		+		14501	12210	6755	6785	17177	17177					0.16298506486123188
KKKMKLMIL	9	Unmodified	_KKKMKLMIL_					0	0	0			REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	REV__ENST00000264065.11_1_2:183641855-183641906:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2509033083916	3	378.248469	1131.72358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.41	1	101.6	101.1	102.1	0.19076								0	0	0	0.42693	1	42640	42640		0.26902	0	1		+		14502	12210	6755	6785	17178	17178					0.16298506486123188
KKKMKVIR	8	Unmodified	_KKKMKVIR_					0	0	0			REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	515.8495971560478	2	515.849522	1029.68449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.42	1	109.42	108.92	109.92	0								0	0	0	1.0178	1	47331	47331		0.69038	0	1		+		14503	8215	6756	6786	17179	17179					0.1708354224674622
KKKMKVIR	8	Unmodified	_KKKMKVIR_					0	0	0			REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	515.8496581912041	2	515.849522	1029.68449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.53	1	109.53	109.03	110.03	0								0	0	0	1.0178	1	47394	47394		0.69038	0	1		+		14504	8215	6756	6786	17180	17180					0.1708354224674622
KKKMKVIR	8	Unmodified	_KKKMKVIR_					0	0	0			REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	REV__chr1:205720653-205749957|134|55.95|0.49|6.84|-|0|NUCKS1,NUCKS1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8514282107353	2	515.849522	1029.68449	3.4677	0.0017888	-0.32381	-0.00016704	3.1439	0.0016218	515.8487317660266	109.39	0.52254	109.54	109.36	109.89	0.1548					48	21	4	0	0	0	0.89178	1	47444	47444		0.69038	0	1	8920000	+		14505	8215	6756	6786	17181	17181					0.1708354224674622
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.4850646853447	4	345.486203	1377.9157	-1.9305	-0.00066697	-0.35285	-0.0001219	-2.2834	-0.00078887	345.48610094393746	27.335	1.0273	27.335	26.716	27.744	0					71	33	3	0	0	0	1.039	3	11462	11409;11462;11528		0.45452	0.38125	1	31445000			14506	2977	6757	6787	17182;17183;17184	17183					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.4855834841728	4	345.486203	1377.9157	-1.8475	-0.0006383	0.60662	0.00020958	-1.2409	-0.00042872	345.486310247511	29.268	1.0732	29.268	28.597	29.67	0					73	34	4	0	0	0	1.039	1	12252	12252		0.45452	0.35968	1	2472100			14507	2977	6757	6787	17185	17185					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.4864990115166	4	345.486203	1377.9157	-1.8316	-0.00063278	1.7115	0.00059129	-0.12007	-4.1483E-05	345.48688718434835	29.531	0.43075	29.531	29.423	29.854	0					23	13	2	0	0	0	1.0391	1	12375	12375		0.40827	0.32491	1	1672400			14508	2977	6757	6787	17186	17186					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	345.7361328005791	4	345.486203	1377.9157	0.36594	0.00012643	-2.3261	-0.00080362	-1.9601	-0.00067719	345.4854080131987	23.733	0.83601	23.976	23.576	24.412	0.24252					59	26	3	0	0	0	1.0391	1	9912	9912		0.40827	0.31342	1	2948800			14509	2977	6757	6787	17187	17187					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	345.4857360720634	4	345.486203	1377.9157	0.42759	0.00014773	-1.9057	-0.00065841	-1.4781	-0.00051068	345.73628477325957	24.878	0.49308	25.128	24.903	25.396	0.25039					49	15	4	0	0	0	1.0402	2	10366	10366;10420		0.08335	0.08335	1	1594800			14510	2977	6757	6787	17188;17189	17188					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	345.4854308962822	4	345.486203	1377.9157	0.4737	0.00016366	-2.352	-0.00081258	-1.8783	-0.00064892	345.4852437693208	25.74	1.0974	25.992	25.397	26.495	0.25197					88	35	3	0	0	0	1.0391	4	10643	10643;10692;10744;10795		0.40827	0.32491	1	3673700			14511	2977	6757	6787	17190;17191;17192;17193	17190					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	345.4853698611259	4	345.486203	1377.9157	0.51501	0.00017793	-2.9901	-0.001033	-2.4751	-0.00085511	345.4850491748001	26.573	0.66681	26.835	26.504	27.171	0.26173					56	21	3	0	0	0	1.039	3	11021	11021;11088;11138		0.45452	0.37117	1	1850800			14512	2977	6757	6787	17194;17195;17196	17194					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.4850952029228	4	345.486203	1377.9157	0.044581	1.5402E-05	-3.1003	-0.0010711	-3.0557	-0.0010557	345.4853499962224	23.603	0.58151	24.817	24.473	25.055	1.2145					45	18	4	0	0	0	1.0402	1	9850	9850		0.08335	0.08335	1	1196800			14513	2977	6757	6787	17197	17197					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.7364684939384	4	345.486203	1377.9157	0.13776	4.7593E-05	-2.4593	-0.00084965	-2.3215	-0.00080206	345.48520315236226	24.384	1.1581	25.625	25.082	26.24	1.241					98	37	3	0	0	0	1.039	3	10160	10160;10202;10383		0.45452	0.37117	1	3804600			14514	2977	6757	6787	17198;17199;17200	17198					0.2418630627280436
KKKPRRGRKPK	11	Unmodified	_KKKPRRGRKPK_					0	0	0		nc|ENSG00000141956|P57071-6|PRDM15;nc|ENSG00000141956|P57071-5|PRDM15;ENSG00000141956|ENST00000398548|PRDM15;nc|ENSG00000141956|P57071-3|PRDM15;nc|ENSG00000141956|P57071-2|PRDM15;nc|ENSG00000141956|P57071|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	nc|ENSG00000141956|P57071-6|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4855834841728	4	345.486203	1377.9157	0.1075	3.714E-05	-2.3909	-0.00082603	-2.2834	-0.00078889	345.48522838844815	23.995	1.2413	25.679	25.118	26.359	1.6845					114	41	4	0	0	0	1.039	2	10003	9945;10003		0.45452	0.37117	1	3726900			14515	2977	6757	6787	17201;17202	17202					0.2418630627280436
KKKQILKKI	9	Unmodified	_KKKQILKKI_					0	0	0			REV__nc|ENSG00000111879|Q8NB25-2|FAM184A	REV__nc|ENSG00000111879|Q8NB25-2|FAM184A	MSMS	GG20161007_CRH_Patient100_A02_01	1	563.9078246951103	2	563.905351	1125.79615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.99765	1	0.99765	0.49765	1.4977	0								0	0	0	0.42693	1	409	409		0	0	1		+		14516	14408	6758	6788	17203	17203					0.23828299875572156
KKKRDRSRNR	10	Unmodified	_KKKRDRSRNR_					0	0	0			REV__nc|ENSG00000029534|P16157-21|ANK1	REV__nc|ENSG00000029534|P16157-21|ANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	448.6090881228447	3	448.607875	1342.8018	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.6	1	83.6	83.1	84.1	0								0	0	0	0.66218	1	34836	34836		0.77653	0.14971	1		+		14517	14384	6759	6789	17204	17204					0.14410791439922832
KKKRDRSRNR	10	Unmodified	_KKKRDRSRNR_					0	0	0			REV__nc|ENSG00000029534|P16157-21|ANK1	REV__nc|ENSG00000029534|P16157-21|ANK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.6078979372978	3	448.607875	1342.8018	3.246	0.0014562	-0.97907	-0.00043922	2.2669	0.0010169	448.60721771502546	96.523	0.12116	96.628	96.543	96.664	0.105					5	3	2	0	0	0	0.89588	1	40398	40398		1.9064	0.1641	1	3573900	+		14518	14384	6759	6789	17205	17205					0.14410791439922832
KKKRDRSRNR	10	Unmodified	_KKKRDRSRNR_					0	0	0			REV__nc|ENSG00000029534|P16157-21|ANK1	REV__nc|ENSG00000029534|P16157-21|ANK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	448.607875	1342.8018	1.3963	0.0006264	0.70319	0.00031546	2.0995	0.00094186	448.60807314622133	96.556	0.15848	96.556	96.475	96.634	0	-0.036185	0.00031122	NaN	1.9064	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2562400	+		14519	14384	6759	6789							0.14410791439922832
KKKRDRSRNR	10	Unmodified	_KKKRDRSRNR_					0	0	0			REV__nc|ENSG00000029534|P16157-21|ANK1	REV__nc|ENSG00000029534|P16157-21|ANK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	448.607875	1342.8018	3.246	0.0014562	-0.97907	-0.00043922	2.2669	0.0010169	448.60721771502546	96.523	0.12116	96.628	96.543	96.664	0.105	0.036185	-0.0019528	NaN	1.9064	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3573900	+		14520	14384	6759	6789							0.14410791439922832
KKKRERKRQR	10	Unmodified	_KKKRERKRQR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.6410705447197	3	471.639287	1411.89603	3.595	0.0016955	0.52219	0.00024629	4.1172	0.0019418	471.63958986788737	105.8	0.13092	105.96	105.88	106.01	0.16679					16	6	3	0	0	0	0.89803	1	45083	45083		0.13989	0.04505	1	66060000	+		14521	13794	6760	6790	17206	17206					0.2065593026204624
KKKRERKRQR	10	Unmodified	_KKKRERKRQR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	471.639287	1411.89603	1.7302	0.00081601	2.0658	0.00097433	3.796	0.0017903	471.97425256138445	105.88	0.11636	105.88	105.81	105.93	0	-0.04239	0.0010799	NaN	0.13989	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16097000	+		14522	13794	6760	6790							0.2065593026204624
KKKRERKRQR	10	Unmodified	_KKKRERKRQR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	471.639287	1411.89603	3.4876	0.0016449	0.83761	0.00039505	4.3252	0.0020399	471.6401231443782	105.83	0.12095	105.89	105.82	105.94	0.05455	-0.038687	-0.00065791	NaN	0.13989	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11740000	+		14523	13794	6760	6790							0.2065593026204624
KKKRERKRQR	10	Unmodified	_KKKRERKRQR_					0	0	0			REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	REV__ENST00000543442.1_1_12:67660488-67660587:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	471.639287	1411.89603	3.595	0.0016955	0.52219	0.00024629	4.1172	0.0019418	471.63958986788737	105.8	0.13092	105.96	105.88	106.01	0.16679	0.037278	-0.0011042	NaN	0.13989	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66060000	+		14524	13794	6760	6790							0.2065593026204624
KKKRNPRKV	9	Unmodified	_KKKRNPRKV_					0	0	0		ENSG00000137876|ENST00000260443|RSL24D1	ENSG00000137876|ENST00000260443|RSL24D1	ENSG00000137876|ENST00000260443|RSL24D1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1561767458916	3	385.259524	1152.75674	2.7082	0.0010434	2.6172	0.0010083	5.3254	0.0020517	385.259386189747	109.68	0.1296	109.73	109.68	109.81	0.048851					6	4	2	0	0	0	0.11941	1	47354	47354		1.0715	0.3738	1	295350			14525	2798	6761	6791	17207	17207					0.1864759264467466
KKKSKHRNK	9	Unmodified	_KKKSKHRNK_					0	0	0			REV__ENST00000474162.1_1_5:60686735-60687614:-|nuORF	REV__ENST00000474162.1_1_5:60686735-60687614:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1539184451103	3	385.247396	1152.72036	0.53724	0.00020697	0.69049	0.00026601	1.2277	0.00047298	385.247548724493	88.348	0.42638	88.348	88.18	88.606	0					45	13	4	0	0	0	0.11954	1	37015	37015		0.26902	0	1	13659000	+		14526	13305	6762	6792	17208	17208					0.1501071574798516
KKKSRKVFKTI	11	Unmodified	_KKKSRKVFKTI_					0	0	0		tr|A0A7D6ZSD8|A0A7D6ZSD8_9CLOTPenicillin-bindingprotein1AOS=ClostridiumintestinaleOX=36845GN=HZF06_15435PE=4SV=1	tr|A0A7D6ZSD8|A0A7D6ZSD8_9CLOTPenicillin-bindingprotein1AOS=ClostridiumintestinaleOX=36845GN=HZF06_15435PE=4SV=1	tr|A0A7D6ZSD8|A0A7D6ZSD8_9CLOTPenicillin-bindingprotein1AOS=ClostridiumintestinaleOX=36845GN=HZF06_15435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.4773437380791	4	341.479049	1361.88709	-2.0537	-0.0007013	-2.3221	-0.00079294	-4.3758	-0.0014942	341.4780828238355	27.659	1.2612	27.659	26.716	27.978	0					127	41	6	0	0	0	1.0369	3	11523	11523;11574;11613		1.1098	0.65524	1	29982000			14527	17131	6763	6793	17209;17210;17211	17209					0.22062143853031557
KKKSRSPRIL	10	Unmodified	_KKKSRSPRIL_					0	0	0			REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.2036315798759	4	303.952933	1211.78262	-0.10032	-3.0492E-05	4.0578	0.0012334	3.9575	0.0012029	303.954542213807	37.959	0.57023	39.243	38.956	39.526	1.284					25	19	2	0	0	0	0.89803	1	15962	15962		0.62683	0	1	1991000	+		14528	12529	6764	6794	17212	17212					0.1852044209633732
KKKSRSPRIL	10	Unmodified	_KKKSRSPRIL_					0	0	0			REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2483093142509	4	303.952933	1211.78262	-0.10032	-3.0492E-05	4.0578	0.0012334	3.9575	0.0012029	303.954542213807	37.959	0.57023	39.243	38.956	39.526	1.284					25	19	2	0	0	0	0.12557	1	15914	15914		1.7423	0.67081	1	1991000	+		14529	12529	6764	6794	17213	17213					0.1852044209633732
KKKTIIILA	9	Unmodified	_KKKTIIILA_					0	0	0		tr|A0A7D6VRT6|A0A7D6VRT6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02905PE=4SV=1	tr|A0A7D6VRT6|A0A7D6VRT6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02905PE=4SV=1	tr|A0A7D6VRT6|A0A7D6VRT6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02905PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2462341189384	3	343.24611	1026.7165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.55	1	106.55	106.05	107.05	0								0	0	0	0.42693	1	45479	45479		0	0	1				14530	16845	6765	6795	17214	17214					0.20421233201568612
KKKTLLHLQLL	11	Unmodified	_KKKTLLHLQLL_					0	0	0		ENST00000226094.9_1_17:66533620-66538255:-|nuORF;ENSG00000108950|ENST00000592554|FAM20A	ENST00000226094.9_1_17:66533620-66538255:-|nuORF	ENST00000226094.9_1_17:66533620-66538255:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4797851443291	4	334.477512	1333.88094	0.36212	0.00012112	3.0579	0.0010228	3.42	0.0011439	334.47876618496844	26.168	2.3423	26.43	25.684	28.027	0.26173					307	76	6	0	0	0	1.0402	2	10817	10817;10869		0.094841	0.094841	1	151020000			14531	1654	6766	6796	17215;17216	17215					0.2273562562152165
KKKTLLHLQLL	11	Unmodified	_KKKTLLHLQLL_					0	0	0		ENST00000226094.9_1_17:66533620-66538255:-|nuORF;ENSG00000108950|ENST00000592554|FAM20A	ENST00000226094.9_1_17:66533620-66538255:-|nuORF	ENST00000226094.9_1_17:66533620-66538255:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4788085818291	4	334.477512	1333.88094	0.06351	2.1243E-05	2.206	0.00073787	2.2695	0.00075911	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	2	10278	10278;10647		0.094841	0.021578	1	234860000			14532	1654	6766	6796	17217;17218	17217					0.2273562562152165
KKKVKKIKYER	11	Unmodified	_KKKVKKIKYER_					0	0	0			REV__nc|ENSG00000014123|O94874-3|UFL1	REV__nc|ENSG00000014123|O94874-3|UFL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	483.3223754763603	3	483.320561	1446.93985	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.27	1	100.34	99.842	100.84	0.072716								0	0	0	0.63775	1	41979	41979		0.08335	0.08335	1		+		14533	8544	6767	6797	17219	17219					0.2342610191581116
KKKVRKKKS	9	Unmodified	_KKKVRKKKS_					0	0	0			REV__tr|A0A553SFC7|A0A553SFC7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08660PE=4SV=1	REV__tr|A0A553SFC7|A0A553SFC7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08660PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0386	1	6.7694	6.2694	7.2694	0.73074								0	0	0	0.42693	1	2505	2505		0.23584	0	1		+		14534	14703	6768	6798	17220	17220					0.22265647447261472
KKKVRLWIFFK	11	Unmodified	_KKKVRLWIFFK_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1003295779228	4	373.993329	1491.94421	-0.7981	-0.00029848	0.03778	1.413E-05	-0.76032	-0.00028435	373.9932178807557	35.063	0.65382	35.063	34.556	35.209	0					61	28	3	0	0	0	0.14606	1	14500	14500		0	0	1	5376800	+		14535	12719	6769	6799	17221	17221					0.21791611129378907
KKLELNEER	9	Unmodified	_KKLELNEER_					0	0	0			REV__nc|ENSG00000145901|Q15025-7|TNIP1	REV__nc|ENSG00000145901|Q15025-7|TNIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8276855349541	2	579.827495	1157.64044	0.77854	0.00045142	0.0095381	5.5304E-06	0.78808	0.00045695	579.8275227814781	19.693	0.40878	19.693	19.508	19.917	0					31	12	4	0	0	0	0.63129	1	8211	8211		10.074	0	1	3780200	+		14536	10289	6770	6800	17222	17222					0.06792184563482806
KKLELNEER	9	Unmodified	_KKLELNEER_					0	0	0			REV__nc|ENSG00000145901|Q15025-7|TNIP1	REV__nc|ENSG00000145901|Q15025-7|TNIP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	579.827495	1157.64044	0.77854	0.00045142	0.0095381	5.5304E-06	0.78808	0.00045695	579.8275227814781	19.693	0.40878	19.693	19.508	19.917	0	0.094334	-0.00015567	NaN	10.074	31	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3780200	+		14537	10289	6770	6800							0.06792184563482806
KKLGAAKF	8	Unmodified	_KKLGAAKF_					0	0	0			REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	431.7783691287041	2	431.779088	861.543623	0.59627	0.00025745	-1.9849	-0.00085705	-1.3887	-0.0005996	431.7780406848569	107.87	0.15886	107.87	107.77	107.93	0					22	8	3	0	0	0	0.89176	1	46335	46335		0.79363	0	1	83785000	+		14538	14923	6771	6801	17223	17223					0.10731286864984213
KKLGAAKF	8	Unmodified	_KKLGAAKF_					0	0	0			REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	431.779088	861.543623	0.59627	0.00025745	-1.9849	-0.00085705	-1.3887	-0.0005996	431.7780406848569	107.87	0.15886	107.87	107.77	107.93	0	-0.043776	0.001212	NaN	0.79363	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83785000	+		14539	14923	6771	6801							0.10731286864984213
KKLGAAKF	8	Unmodified	_KKLGAAKF_					0	0	0			REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	REV__tr|A0A553SJX5|A0A553SJX5_NIACIAcyl--CoAligaseOS=NialliacirculansOX=1397GN=CEQ21_17680PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	431.779088	861.543623	3.1305	0.0013517	-4.4841	-0.0019361	-1.3536	-0.00058445	431.7769497137847	107.83	0.17897	107.89	107.79	107.97	0.052444	-0.027068	-0.0009462	NaN	0.79363	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	90244000	+		14540	14923	6771	6801							0.10731286864984213
KKLITEVF	8	Unmodified	_KKLITEVF_					0	0	0		ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3044921755791	2	489.305136	976.595718	3.3006	0.001615	-3.8921	-0.0019044	-0.59143	-0.00028939	489.3028331991259	106.07	0.12218	106.23	106.17	106.29	0.16174					12	6	2	0	0	0	0.8909	1	45285	45285		2.0598	0	1	40242000			14541	5394	6772	6802	17224	17224					0.1064840548808661
KKLITEVF	8	Unmodified	_KKLITEVF_					0	0	0		ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.305136	976.595718	3.2096	0.0015705	-3.3535	-0.0016409	-0.14388	-7.0403E-05	489.3031802409246	106.1	0.13988	106.25	106.18	106.32	0.15781	0.011778	0.0001978	NaN	2.0598	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28689000			14542	5394	6772	6802							0.1064840548808661
KKLKHLMLHRI	11	Unmodified	_KKLKHLMLHRI_					0	0	0		ENST00000519029.1_1_8:67896384-67896720:-|nuORF	ENST00000519029.1_1_8:67896384-67896720:-|nuORF	ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	355.2305786013603	4	354.980059	1415.89113	-0.80483	-0.0002857	-0.24634	-8.7444E-05	-1.0512	-0.00037314	354.97993895705497	33.968	0.39531	35.242	35.051	35.446	1.2746					113	41	3	0	0	0	1.039	4	14214	14214;14226;14266;14302		0.45452	0.35968	1	73345000			14543	7065	6773	6803	17225;17226;17227;17228	17225					0.19981910075080123
KKLKHLMLHRI	11	Unmodified	_KKLKHLMLHRI_					0	0	0		ENST00000519029.1_1_8:67896384-67896720:-|nuORF	ENST00000519029.1_1_8:67896384-67896720:-|nuORF	ENST00000519029.1_1_8:67896384-67896720:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	354.9796630740166	4	354.980059	1415.89113	0.40284	0.000143	-1.5976	-0.00056712	-1.1948	-0.00042413	354.9794003403829	33.506	0.35849	35.329	35.164	35.523	1.8227					96	31	4	0	0	0	1.039	2	14003	14003;14052		0.45452	0.35968	1	121030000			14544	7065	6773	6803	17229;17230	17229					0.19981910075080123
KKLKHRRTS	9	Unmodified	_KKLKHRRTS_					0	0	0		nc|ENSG00000173210|O94929-2|ABLIM3;nc|ENSG00000173210|O94929-3|ABLIM3;ENSG00000173210|ENST00000309868|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	nc|ENSG00000173210|O94929-2|ABLIM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3677245974541	2	577.367456	1152.72036	2.4018	0.0013867	-1.5594	-0.00090034	0.8424	0.00048637	577.3665049446504	88.409	0.58199	88.409	88.119	88.701	0					69	18	5	0	0	0	0.85019	1	36910	36910		0.52476	0	1	76654000			14545	4273	6774	6804	17231	17231					0.1501071574798516
KKLKKRKQILL	11	Unmodified	_KKLKKRKQILL_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MSMS	GG20161007_CRH_Patient100_W632_01	3	698.1476928591728	2	698.497939	1394.98132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.02	1	99.218	98.718	99.718	0.19767								0	0	0	0.63775	1	41686	41686		0	0	1		+		14546	11856	6775	6805	17232	17232					0.2996328267518038
KKLKLAKAKV	10	Unmodified	_KKLKLAKAKV_					0	0	0			REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	REV__ENST00000480924.3_1_12:87563815-87564172:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	564.2386352419853	2	563.905351	1125.79615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.999	1	3.999	3.499	4.499	0								0	0	0	0.66264	1	1643	1643		0	0	1		+		14547	13356	6776	6806	17233	17233					0.23828299875526682
KKLKSILNHL	10	Unmodified	_KKLKSILNHL_					0	0	0			REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	597.6005126833916	2	597.390065	1192.76558	3.2	0.0019116	-2.677	-0.0015992	0.52296	0.00031241	597.8900477362181	108.61	0.18195	108.76	108.69	108.87	0.15898					15	8	3	0	0	0	0.1256	1	46962	46962		0.40072	0	1	8347800	+		14548	11629	6777	6807	17234	17234					0.17690521490499123
KKLLIRALHQL	11	Unmodified	_KKLLIRALHQL_					0	0	0		tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4791747927666	4	333.976408	1331.87652	-2.2305	-0.00074492	3.0743	0.0010267	0.84385	0.00028183	334.4797138479955	29.72	2.4785	29.72	29.025	31.503	0					116	80	3	0	0	0	1.0402	2	12306	12306;12464		0.08335	0.010087	1	2109700			14549	16459	6778	6808	17235;17236	17235					0.22386161198619448
KKLLIRALHQL	11	Unmodified	_KKLLIRALHQL_					0	0	0		tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	tr|A0A553SPB7|A0A553SPB7_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=sigEPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.4806091189384	4	333.976408	1331.87652	0.25533	8.5273E-05	0.12511	4.1784E-05	0.38044	0.00012706	334.22692941168077	24.206	0.27319	24.448	24.35	24.623	0.24251					11	8	2	0	0	0	0.14606	1	10156	10156		0.45452	0.31463	1	439160			14550	16459	6778	6808	17237	17237					0.22386161198619448
KKLLLLEERRW	11	Unmodified	_KKLLLLEERRW_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	742.4647704958916	2	742.45901	1482.90347	2.1625	0.0016056	1.7358	0.0012887	3.8983	0.0028943	743.4607004007956	85.588	1.1508	86.715	86.412	87.563	1.1265					98	47	3	0	0	0	1.0393	1	36147	36147		0.35063	0.043601	1	16834000	+		14551	11110	6779	6809	17238	17238					0.18133225019118981
KKLLLLEERRW	11	Unmodified	_KKLLLLEERRW_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	742.4624511599541	2	742.45901	1482.90347	2.8211	0.0020946	2.6333	0.0019551	5.4544	0.0040497	742.4609066797822	85.467	0.60073	87.014	86.747	87.348	1.547					37	24	2	0	0	0	1.0393	1	35914	35914		0.35063	0.043601	1	9571900	+		14552	11110	6779	6809	17239	17239					0.18133225019118981
KKLLLLEERRW	11	Unmodified	_KKLLLLEERRW_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	742.4624511599541	2	742.45901	1482.90347	2.5054	0.0018601	-1.0505	-0.00077995	1.4549	0.0010802	743.4589915747908	85.137	0.69163	86.734	86.514	87.206	1.5962					78	28	5	0	0	0	0.14606	1	35914	35914		0.35063	0	1	14302000	+		14553	11110	6779	6809	17240	17240					0.18133225019118981
KKLLLLEERRW	11	Unmodified	_KKLLLLEERRW_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	742.45901	1482.90347	2.8211	0.0020946	2.6333	0.0019551	5.4544	0.0040497	742.4609066797822	85.467	0.60073	87.014	86.747	87.348	1.547	0.14952	0.00067201	NaN	0.35063	37	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9571900	+		14554	11110	6779	6809							0.18133225019118981
KKLNTLFFVIS	11	Unmodified	_KKLNTLFFVIS_					0	0	0			REV__ENST00000426431.2_1_12:53808377-53808536:+|nuORF	REV__ENST00000426431.2_1_12:53808377-53808536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2018310427666	4	328.202416	1308.78056	0.18251	5.9899E-05	-0.79086	-0.00025956	-0.60835	-0.00019966	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	1.0224	1	15304	15304		2.4348	0	1	36142000	+		14555	12999	6780	6810	17241	17241					0.1385196856786024
KKLPIIKKKVR	11	Unmodified	_KKLPIIKKKVR_					0	0	0		nc|ENSG00000117859|Q96SU4-7|OSBPL9;nc|ENSG00000117859|Q96SU4-2|OSBPL9;ENSG00000117859|ENST00000428468|OSBPL9;nc|ENSG00000117859|Q96SU4-6|OSBPL9;nc|ENSG00000117859|Q96SU4-5|OSBPL9;nc|ENSG00000117859|Q96SU4-4|OSBPL9;nc|ENSG00000117859|Q96SU4-3|OSBPL9	nc|ENSG00000117859|Q96SU4-7|OSBPL9	nc|ENSG00000117859|Q96SU4-7|OSBPL9	MSMS	GG20161007_CRH_Patient100_W632_01	3	676.2994872927666	2	675.987207	1349.95986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.318	1	97.602	97.102	98.102	0.28442								0	0	0	0.63775	1	40949	40949		0.30703	0	1				14556	2024	6781	6811	17242	17242					0.2988789764642661
KKLQWLPRK	9	Unmodified	_KKLQWLPRK_					0	0	0			REV__DDHD2|p.W598Gfs*57|1|0.03|ENSG00000085788|chr8:38253027-38253028|-/GG|frameshift_variant	REV__DDHD2|p.W598Gfs*57|1|0.03|ENSG00000085788|chr8:38253027-38253028|-/GG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2530090212822	3	399.592392	1195.75535	0.86172	0.00034433	-1.3891	-0.00055506	-0.52734	-0.00021072	399.5918590943673	23.671	0.58646	24.885	24.718	25.305	1.2145					28	18	2	0	0	0	0.11954	1	10027	10027		0.26902	0	1	761940	+		14557	8429	6782	6812	17243	17243					0.16529958555906887
KKLTPLLPP	9	Unmodified	_KKLTPLLPP_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2283508181572	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.089	1	27.351	26.851	27.851	0.26173								0	0	0	0.42693	1	11326	11326		0.26902	0	1				14558	4312	6783	6813	17244	17244					0.15604971276127344
KKLTPLLPP	9	Unmodified	_KKLTPLLPP_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2287475466728	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.271	1	27.542	27.042	28.042	0.27119								0	0	0	0.42693	1	11402	11402		0.26902	0	1				14559	4312	6783	6813	17245	17245					0.15604971276127344
KKLTPLLPP	9	Unmodified	_KKLTPLLPP_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2278320193291	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.459	1	27.73	27.23	28.23	0.27119								0	0	0	0.42693	1	11481	11481		0.26902	0	1				14560	4312	6783	6813	17246	17246					0.15604971276127344
KKLTPLLPP	9	Unmodified	_KKLTPLLPP_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2267028689384	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.562	1	27.834	27.334	28.334	0.27119								0	0	0	0.42693	1	11525	11525		0.26902	0	1				14561	4312	6783	6813	17247	17247					0.15604971276127344
KKLTPLLPP	9	Unmodified	_KKLTPLLPP_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2283813357353	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.769	1	44.69	44.19	45.19	1.9211								0	0	0	0.42693	1	17923	17923		1.1933	0.12188	1				14562	4312	6783	6813	17248	17248					0.15604971276127344
KKLVIVKT	8	Unmodified	_KKLVIVKT_					0	0	0		tr|A0A7D6VUW2|A0A7D6VUW2_9CLOTTransportersubstrate-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03110PE=3SV=1;tr|A0A553SHT3|A0A553SHT3_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13565PE=4SV=1	tr|A0A7D6VUW2|A0A7D6VUW2_9CLOTTransportersubstrate-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03110PE=3SV=1	tr|A0A7D6VUW2|A0A7D6VUW2_9CLOTTransportersubstrate-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03110PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229492068291	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.227	1	90.631	90.131	91.131	1.4045								0	0	0	1.0178	1	37593	37593		0.40072	0	1				14563	16167	6784	6814	17249	17249					0.18136988621688488
KKLYKKRKRKK	11	Unmodified	_KKLYKKRKRKK_					0	0	0			REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	752.5172607302666	2	752.519737	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.37	1	106.37	105.87	106.87	0								0	0	0	0.63775	1	45376	45376		0	0	1		+		14564	14284	6785	6815	17250	17250					0.2935289217227819
KKLYKKRKRKK	11	Unmodified	_KKLYKKRKRKK_					0	0	0			REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	752.5189697146416	2	752.519737	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.09	1	110.09	109.59	110.59	0								0	0	0	0.63775	1	47670	47670		0	0	1		+		14565	14284	6785	6815	17251	17251					0.2935289217227819
KKLYKKRKRKK	11	Unmodified	_KKLYKKRKRKK_					0	0	0			REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	REV__L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.0162536501884	3	502.015583	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.44	1	108.6	108.1	109.1	0.15853								0	0	0	0.63775	1	46884	46884		0	0	1		+		14566	14284	6785	6815	17252	17252					0.2935289217227819
KKMLLLVG	8	Unmodified	_KKMLLLVG_					0	0	0		nc|ENSG00000197705|Q9P2G3-2|KLHL14;ENSG00000197705|ENST00000359358|KLHL14	nc|ENSG00000197705|Q9P2G3-2|KLHL14	nc|ENSG00000197705|Q9P2G3-2|KLHL14	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2013732790947	3	301.201625	900.583045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.5	1	100.58	100.08	101.08	0.072716								0	0	0	1.0178	1	42077	42077		0	0	1				14567	5021	6786	6816	17253	17253					0.1287767082422988
KKNFRRRKRR	10	Unmodified	_KKNFRRRKRR_					0	0	0		ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3123962283134	3	482.311393	1443.91235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.025	1	45.352	44.852	45.852	0.32674								0	0	0	0.66255	1	18906	18906		0.13989	0	1				14568	6890	6787	6817	17254	17254					0.2081505621879387
KKNFRRRKRR	10	Unmodified	_KKNFRRRKRR_					0	0	0		ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	482.3127929568291	3	482.311393	1443.91235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.658	1	45.011	44.511	45.511	1.3536								0	0	0	0.66255	1	18304	18304		0.13989	0	1				14569	6890	6787	6817	17255	17255					0.2081505621879387
KKNFRRRKRR	10	Unmodified	_KKNFRRRKRR_					0	0	0		ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	ENST00000488854.6_1_3:113082116-113098301:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	482.3148071169853	3	482.311393	1443.91235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.046	1	44.967	44.467	45.467	1.9211								0	0	0	0.66255	1	18045	18045		0.13989	0	1				14570	6890	6787	6817	17256	17256					0.2081505621879387
KKNNIYMVLV	10	Unmodified	_KKNNIYMVLV_					0	0	0		tr|A0A7D6VTJ0|A0A7D6VTJ0_9CLOTProbablecelldivisionproteinWhiAOS=ClostridiumintestinaleOX=36845GN=whiAPE=3SV=1	tr|A0A7D6VTJ0|A0A7D6VTJ0_9CLOTProbablecelldivisionproteinWhiAOS=ClostridiumintestinaleOX=36845GN=whiAPE=3SV=1	tr|A0A7D6VTJ0|A0A7D6VTJ0_9CLOTProbablecelldivisionproteinWhiAOS=ClostridiumintestinaleOX=36845GN=whiAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3593017458916	2	611.354834	1220.69511	2.1953	0.0013421	2.2809	0.0013944	4.4761	0.0027365	611.3562509892471	93.818	0.4102	93.818	93.615	94.025	0					22	12	3	0	0	0	0.89803	1	39244	39244		1.6526	0.17072	1	687850			14571	16922	6788	6818	17257	17257					0.09359480110515506
KKPFIAALI	9	Unmodified	_KKPFIAALI_					0	0	0		tr|A0A553SKR3|A0A553SKR3_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_19165PE=4SV=1	tr|A0A553SKR3|A0A553SKR3_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_19165PE=4SV=1	tr|A0A553SKR3|A0A553SKR3_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_19165PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2232238650322	3	334.223306	999.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.402	1	88.637	88.137	89.137	0.23471								0	0	0	0.42693	1	37067	37067		0.26902	0.26902	1				14572	16303	6789	6819	17258	17258					0.1482498862170587
KKPIAICEL	9	Unmodified	_KKPIAICEL_					0	0	0			REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	REV__ENST00000444273.6_1_6:56954967-57015704:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.7361022830009	2	507.804445	1013.59434	2.2499	0.0011425	-3.5775	-0.0018167	-1.3276	-0.00067414	507.8022880449159	70.198	0.41356	72.036	71.784	72.198	1.8378					18	12	2	0	0	0	0.097511	1	29361	29361		23.148	5.0134	1	549580	+		14573	9357	6790	6820	17259	17259					0.08808448127683732
KKPIGAIP	8	Unmodified	_KKPIGAIP_					0	0	0		ENST00000599588.5_1_19:17337742-17339107:+|nuORF;ENST00000596279.1_1_19:17337742-17339154:+|nuORF;ENST00000594283.5_1_19:17337742-17339731:+|nuORF;ENSG00000099330|ENST00000215061|OCEL1	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2726928591728	2	412.273638	822.532724	0.19771	8.1512E-05	-1.769	-0.00072933	-1.5713	-0.00064782	412.2727379521463	32.828	1.1148	32.828	31.916	33.031	0					63	35	2	0	0	0	0.88958	1	13695	13695		2.8892	0	1	3032500			14574	1206	6791	6821	17260	17260					0.1143588449069739
KKPIGAIP	8	Unmodified	_KKPIGAIP_					0	0	0		ENST00000599588.5_1_19:17337742-17339107:+|nuORF;ENST00000596279.1_1_19:17337742-17339154:+|nuORF;ENST00000594283.5_1_19:17337742-17339731:+|nuORF;ENSG00000099330|ENST00000215061|OCEL1	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2707397341728	2	412.273638	822.532724	1.4345	0.00059141	-2.9342	-0.0012097	-1.4997	-0.00061827	412.2724233429208	31.958	0.89665	32.248	31.905	32.802	0.29086					51	28	2	0	0	0	0.88958	1	13333	13333		2.8892	0	1	2419800			14575	1206	6791	6821	17261	17261					0.1143588449069739
KKPIGAIP	8	Unmodified	_KKPIGAIP_					0	0	0		ENST00000599588.5_1_19:17337742-17339107:+|nuORF;ENST00000596279.1_1_19:17337742-17339154:+|nuORF;ENST00000594283.5_1_19:17337742-17339731:+|nuORF;ENSG00000099330|ENST00000215061|OCEL1	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	ENST00000599588.5_1_19:17337742-17339107:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	412.273638	822.532724	0.75596	0.00031166	-3.3453	-0.0013792	-2.5894	-0.0010675	412.27237330098075	30.177	0.92892	31.992	31.584	32.513	1.8151	-0.10205	-0.00047529	NaN	2.8892	59	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3328500			14576	1206	6791	6821							0.1143588449069739
KKPILIGPKLC	11	Unmodified	_KKPILIGPKLC_					0	0	0			REV__ENST00000244496.5_1_6:42997153-42997255:+|nuORF	REV__ENST00000244496.5_1_6:42997153-42997255:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1985351443291	4	303.199248	1208.76789	0.17423	5.2825E-05	-2.1187	-0.00064237	-1.9444	-0.00058955	303.1986481132082	31.148	0.57637	32.972	32.552	33.128	1.8246					66	19	4	0	0	0	1.0365	1	12997	12997		1.2148	0.588	1	6939100	+		14577	12131	6792	6822	17262	17262					0.1718523390397877
KKPKPKKVAPL	11	Unmodified	_KKPKPKKVAPL_					0	0	0		ENSG00000111642|ENST00000544040|CHD4;nc|ENSG00000111642|Q14839-2|CHD4	ENSG00000111642|ENST00000544040|CHD4	ENSG00000111642|ENST00000544040|CHD4	MSMS	GG20161007_CRH_Patient100_A02_01	1	617.4272338747978	2	617.423908	1232.83326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.61	1	114.61	114.11	115.11	0								0	0	0	0.63775	1	49480	49480		0.30703	0	1				14578	1746	6793	6823	17263	17263					0.2261597142132814
KKPPKWIRRPV	11	Unmodified	_KKPPKWIRRPV_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.9802734255791	4	351.979216	1403.88776	1.0878	0.00038288	0.40535	0.00014267	1.4932	0.00052556	352.2301765637922	35.78	0.42992	36.082	35.794	36.224	0.30196					71	39	2	0	0	0	1.0369	1	15022	15022		1.1098	0.48293	1	37147000			14579	2846	6794	6824	17264	17264					0.20196983292703408
KKPRLLHGTL	10	Unmodified	_KKPRLLHGTL_					0	0	0		ENST00000485710.5_1_1:1247522-1249186:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ACAP3-CPSF3L|1|fusion;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;ENSG00000127054|ENST00000435064|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	ENST00000485710.5_1_1:1247522-1249186:-|nuORF	ENST00000485710.5_1_1:1247522-1249186:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2538635134697	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.313	1	28.06	27.56	28.56	1.747								0	0	0	0.66254	1	11005	11005		0.15932	0	1				14580	16	6795	6825	17265	17265					0.1602136817630253
KKPRLLHGTL	10	Unmodified	_KKPRLLHGTL_					0	0	0		ENST00000485710.5_1_1:1247522-1249186:-|nuORF;ENST00000470030.6_1_1:1247241-1248711:-|nuORF;ACAP3-CPSF3L|1|fusion;nc|ENSG00000127054|Q5TA45-2|INTS11;nc|ENSG00000127054|Q5TA45-4|INTS11;nc|ENSG00000127054|Q5TA45-3|INTS11;ENSG00000127054|ENST00000435064|INTS11;nc|ENSG00000127054|Q5TA45-5|INTS11	ENST00000485710.5_1_1:1247522-1249186:-|nuORF	ENST00000485710.5_1_1:1247522-1249186:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2531005740166	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.43	1	28.177	27.677	28.677	1.747								0	0	0	0.66254	1	11056	11056		0.15932	0	1				14581	16	6795	6825	17266	17266					0.1602136817630253
KKPRYRHRLLR	11	Unmodified	_KKPRYRHRLLR_					0	0	0		nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-6|ATRX;ATRX|p.R1371Kfs*6|1|0.17|ENSG00000085224|chrX:77663389-77663390|TC/-|frameshift_variant;ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	nc|ENSG00000085224|P46100-2|ATRX	nc|ENSG00000085224|P46100-2|ATRX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.3256713747978	3	508.323299	1521.94807	2.9824	0.001516	3.085	0.0015682	6.0674	0.0030842	508.32431751554174	97.954	0.12099	98.045	97.968	98.089	0.090881					7	3	3	0	0	0	1.0402	1	40989	40989		0.094841	0.011491	1	24791000			14582	1059	6796	6826	17267	17267					0.20797093675810174
KKPRYRHRLLR	11	Unmodified	_KKPRYRHRLLR_					0	0	0		nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;ENSG00000085224|ENST00000373344|ATRX;nc|ENSG00000085224|P46100-6|ATRX;ATRX|p.R1371Kfs*6|1|0.17|ENSG00000085224|chrX:77663389-77663390|TC/-|frameshift_variant;ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	nc|ENSG00000085224|P46100-2|ATRX	nc|ENSG00000085224|P46100-2|ATRX	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.8697692751884	5	305.39689	1521.94807	0.68539	0.00020932	3.0243	0.00092362	3.7097	0.0011329	305.3978450238042	34.708	0.26712	35.008	34.816	35.083	0.29941					14	10	2	0	0	0	0.14606	1	14608	14608		0.08335	0.08335	1	903060			14583	1059	6796	6826	17268	17268					0.20797093675810174
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.7340576052666	4	359.48366	1433.90553	-1.4482	-0.0005206	0.48425	0.00017408	-0.96393	-0.00034652	359.48381296191536	29.289	1.139	29.289	29.084	30.223	0					99	36	5	0	0	0	1.0365	3	12212	12212;12261;12313		1.2148	0.76031	1	27970000	+		14584	11646	6797	6827	17269;17270;17271	17269					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4832641482353	4	359.48366	1433.90553	-1.3554	-0.00048724	0.4002	0.00014387	-0.9552	-0.00034338	359.4837626090117	31.334	2.3411	31.334	30.039	32.38	0					164	75	4	0	0	0	1.0365	1	13328	13328		1.2148	1.12	1	27624000	+		14585	11646	6797	6827	17272	17272					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.7340576052666	4	359.48366	1433.90553	-1.4482	-0.0005206	0.48425	0.00017408	-0.96393	-0.00034652	359.48381296191536	29.289	1.139	29.289	29.084	30.223	0					99	36	5	0	0	0	0.14606	1	12212	12212		1.2148	0.76031	1	27970000	+		14586	11646	6797	6827	17273	17273					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4851562380791	4	359.48366	1433.90553	0.96497	0.00034689	-1.617	-0.00058127	-0.65198	-0.00023438	359.4830407973349	31.97	1.4144	32.261	31.66	33.074	0.29086					108	45	3	0	0	0	1.0365	4	13306	13306;13360;13410;13463		1.2148	0.84816	1	1701600	+		14587	11646	6797	6827	17274;17275;17276;17277	17274					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4815856814384	4	359.48366	1433.90553	1.0415	0.00037439	-0.30496	-0.00010963	0.73651	0.00026476	359.48373705509897	33.422	1.157	33.719	33.23	34.387	0.29701					74	38	3	0	0	0	1.0402	1	13970	13970		0.094841	0	1	1193900	+		14588	11646	6797	6827	17278	17278					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4826537966728	4	359.48366	1433.90553	-0.0088838	-3.1936E-06	-1.5329	-0.00055104	-1.5418	-0.00055424	359.4829911547571	26.427	1.0213	27.698	27.153	28.174	1.2715					132	32	5	0	0	0	0.9945	3	11147	11147;11185;11225		4.1166	3.6621	1	23682000	+		14589	11646	6797	6827	17279;17280;17281	17279					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4819518923759	4	359.48366	1433.90553	-0.066736	-2.399E-05	-3.1575	-0.0011351	-3.2242	-0.0011591	359.48226636142175	27.051	1.1533	28.323	28.115	29.268	1.2715					101	37	4	0	0	0	1.0365	2	11291	11291;11338		1.2148	1.12	1	17114000	+		14590	11646	6797	6827	17282;17283	17282					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7339660525322	4	359.48366	1433.90553	-0.24428	-8.7814E-05	-1.7993	-0.00064684	-2.0436	-0.00073465	359.48291863379364	28.8	2.1919	30.082	29.125	31.317	1.2825					177	71	5	0	0	0	1.0254	2	12159	12107;12159		2.2527	1.8861	1	23719000	+		14591	11646	6797	6827	17284;17285	17285					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4826232790947	4	359.48366	1433.90553	0.34538	0.00012416	-2.1741	-0.00078154	-1.8287	-0.00065738	359.48278123304226	28.148	1.2888	29.924	28.954	30.243	1.7754					160	41	5	0	0	0	1.0365	4	11826	11682;11776;11826;11916		1.2148	1.12	1	34011000	+		14592	11646	6797	6827	17286;17287;17288;17289	17288					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.7343322634697	4	359.48366	1433.90553	0.41739	0.00015004	-1.4561	-0.00052344	-1.0387	-0.0003734	359.48299679152814	29.988	1.6772	31.803	30.914	32.591	1.8151					97	54	4	0	0	0	1.0365	1	12587	12587		1.2148	0.84816	1	1879600	+		14593	11646	6797	6827	17290	17290					0.20593698547577333
KKPTKQKRRHK	11	Unmodified	_KKPTKQKRRHK_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4829284548759	4	359.48366	1433.90553	0.45758	0.00016449	-1.3761	-0.0004947	-0.91855	-0.0003302	359.4831259120611	31.772	0.60264	33.596	33.49	34.092	1.8246					27	22	2	0	0	0	1.0402	1	13320	13320		0.094841	0	1	1595400	+		14594	11646	6797	6827	17291	17291					0.20593698547577333
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2091552615166	4	339.210101	1352.8113	-1.5694	-0.00053234	-2.3898	-0.00081065	-3.9592	-0.001343	339.2089405362541	41.468	1.43	41.468	40.612	42.042	0					110	44	3	0	0	0	1.0071	2	17395	17395;17437		3.3557	1.7634	1	2816400			14595	7327	6798	6828	17292;17293	17292					0.14900559725469975
KKQASRRKHKS	11	Unmodified	_KKQASRRKHKS_					0	0	0		ENST00000560184.5_1_15:90408823-90437190:-|nuORF;ENST00000560224.1_1_15:90408823-90446582:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	339.2098876833916	4	339.210101	1352.8113	1.1507	0.00039033	-3.8332	-0.0013002	-2.6825	-0.00090992	339.2080321400628	39.818	0.77192	40.131	39.578	40.35	0.31263					49	24	3	0	0	0	1.0372	1	16663	16663		1.0136	0.31591	1	1506100			14596	7327	6798	6828	17294	17294					0.14900559725469975
KKQELRFIQYW	11	Unmodified	_KKQELRFIQYW_					0	0	0		ENSG00000186399|ENST00000327271|GOLGA8R;ENSG00000232653|ENST00000448387|GOLGA8N;ENSG00000206127|ENST00000509311|GOLGA8O;ENSG00000188626|ENST00000563027|GOLGA8M;ENSG00000178115|ENST00000562783|GOLGA8Q;ENSG00000261739|ENST00000562295|GOLGA8S	ENSG00000186399|ENST00000327271|GOLGA8R	ENSG00000186399|ENST00000327271|GOLGA8R	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.2949096560478	3	513.620788	1537.84053	1.9133	0.00098272	0.48689	0.00025008	2.4002	0.0012328	513.9552971016615	45.881	0.72066	46.21	45.696	46.416	0.32899					34	23	2	0	0	0	0.14606	1	19300	19300		0.40827	0.31342	1	710990			14597	4474	6799	6829	17295	17295					0.09312659231113685
KKRATAGK	8	Unmodified	_KKRATAGK_					0	0	0			REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	430.5291015505791	2	430.277244	858.539935	0.74339	0.00031987	2.4183	0.0010405	3.1617	0.0013604	430.27826508209967	33.448	0.66813	33.448	33.122	33.791	0					43	21	3	0	0	0	2.3239	1	14002	14002		5.2307	0	1	3967800	+		14598	13054	6800	6830	17296	17296					0.1050061709113379
KKRATAGK	8	Unmodified	_KKRATAGK_					0	0	0			REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	430.5298644900322	2	430.277244	858.539935	1.579	0.00067939	1.5975	0.00068737	3.1765	0.0013668	430.27786852603816	31.626	0.95547	31.917	31.538	32.494	0.29086					56	30	2	0	0	0	2.3239	1	13279	13279		5.2307	0	1	2900800	+		14599	13054	6800	6830	17297	17297					0.1050061709113379
KKRATAGK	8	Unmodified	_KKRATAGK_					0	0	0			REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	430.277244	858.539935	0.70245	0.00030225	0.87994	0.00037862	1.5824	0.00068087	430.277351492438	32.092	0.78097	33.374	32.989	33.77	1.2813	0.0043165	-0.00085833	NaN	5.2307	45	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3150900	+		14600	13054	6800	6830							0.1050061709113379
KKRATAGK	8	Unmodified	_KKRATAGK_					0	0	0			REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	REV__ENST00000436545.5_1_17:41116178-41116429:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	430.277244	858.539935	0.90502	0.00038941	2.0485	0.0008814	2.9535	0.0012708	430.278024516917	31.461	0.83437	33.286	32.896	33.73	1.8246	-0.083376	0.00014724	NaN	5.2307	48	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2454500	+		14601	13054	6800	6830							0.1050061709113379
KKRDISLAHAL	11	Unmodified	_KKRDISLAHAL_					0	0	0		tr|A0A553SKI0|A0A553SKI0_NIACIo-succinylbenzoatesynthaseOS=NialliacirculansOX=1397GN=menCPE=3SV=1	tr|A0A553SKI0|A0A553SKI0_NIACIo-succinylbenzoatesynthaseOS=NialliacirculansOX=1397GN=menCPE=3SV=1	tr|A0A553SKI0|A0A553SKI0_NIACIo-succinylbenzoatesynthaseOS=NialliacirculansOX=1397GN=menCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9212524294853	3	417.922578	1250.7459	0.30477	0.00012737	-2.4187	-0.0010108	-2.1139	-0.00088344	417.92121231746313	31.093	0.63732	31.093	30.928	31.565	0					68	20	4	0	0	0	0.9945	1	13071	13071		4.1166	1.2733	1	7414100			14602	16291	6801	6831	17298	17298					0.13056145479754377
KKREKKPIFGL	11	Unmodified	_KKREKKPIFGL_					0	0	0			REV__ENSG00000114933|ENST00000403263|INO80D	REV__ENSG00000114933|ENST00000403263|INO80D	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	336.2019225955009	4	336.718499	1342.84489	2.0378	0.00068616	3.2232	0.0010853	5.261	0.0017715	336.71897539612013	85.428	0.12566	85.68	85.632	85.758	0.25227					5	3	2	0	0	0	0.14606	1	35723	35723		0.094841	0.011491	1	214760	+		14603	9422	6802	6832	17299	17299					0.1871816844463865
KKRFLEKRRR	10	Unmodified	_KKRFLEKRRR_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9724304080009	3	472.972266	1415.89497	2.2546	0.0010664	-2.1328	-0.0010088	0.12176	5.7591E-05	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	0.89803	4	17012	17012;17061;17152;17204		0.12286	0	1	4678700	+		14604	9541	6803	6833	17300;17301;17302;17303	17300					0.20365715893126435
KKRFLEKRRR	10	Unmodified	_KKRFLEKRRR_					0	0	0			REV__nc|ENSG00000119509|Q9Y283-2|INVS	REV__nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3049804568291	3	472.972266	1415.89497	1.1064	0.0005233	-3.1665	-0.0014977	-2.0601	-0.00097436	472.97063471594606	33.475	0.28645	35.298	35.202	35.489	1.8227					66	24	4	0	0	0	0.89803	1	14050	14050		0.12286	0	1	63957000	+		14605	9541	6803	6833	17304	17304					0.20365715893126435
KKRGRAVP	8	Unmodified	_KKRGRAVP_					0	0	0		nc|ENSG00000154783|Q6ZNL6-2|FGD5;ENSG00000154783|ENST00000285046|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2999755740166	2	456.29851	910.582468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.83	1	101.01	100.51	101.51	0.18047								0	0	0	1.0178	1	42427	42427		0.79363	0	1				14606	3397	6804	6834	17305	17305					0.12360012219357941
KKRHTKEKVLR	11	Unmodified	_KKRHTKEKVLR_					0	0	0		DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant;DSC2|p.G687Wfs*36|1|0.04|ENSG00000134755|chr18:31071670-31071671|CC/-|frameshift_variant;nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	357.1908141970634	4	356.480852	1421.8943	1.6316	0.00058162	-0.04839	-1.725E-05	1.5832	0.00056437	356.481827564963	65.829	0.15672	66.153	66.052	66.209	0.32449					6	4	2	0	0	0	0.14606	1	27552	27552		0.094841	0	1	316130			14607	429	6805	6835	17306	17306					0.20022876453435856
KKRHTKEKVLR	11	Unmodified	_KKRHTKEKVLR_					0	0	0		DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant;DSC2|p.G687Wfs*36|1|0.04|ENSG00000134755|chr18:31071670-31071671|CC/-|frameshift_variant;nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	356.480852	1421.8943	1.8907	0.000674	3.1691	0.0011297	5.0598	0.0018037	356.4823564857914	64.624	0.093941	66.031	65.985	66.079	1.4071	-0.060937	0.0008857	NaN	0.094841	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162120			14608	429	6805	6835							0.20022876453435856
KKRKKKRKDYQ	11	Unmodified	_KKRKKKRKDYQ_					0	0	0		ENSG00000118507|ENST00000431975|AKAP7	ENSG00000118507|ENST00000431975|AKAP7	ENSG00000118507|ENST00000431975|AKAP7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.6509277224541	3	502.651081	1504.93141	1.384	0.00069569	-1.7977	-0.00090362	-0.41367	-0.00020793	502.6499868248828	98.012	0.11679	98.012	97.939	98.056	0					16	4	4	0	0	0	1.0402	1	40969	40969		0.094841	0.094841	1	55684000			14609	2037	6806	6836	17307	17307					0.19914547999223942
KKRKPNTKEF	10	Unmodified	_KKRKPNTKEF_					0	0	0			REV__ENST00000402902.1_1_6:66803326-66803860:-|nuORF	REV__ENST00000402902.1_1_6:66803326-66803860:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	638.3795043826103	2	638.380229	1274.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.869	1	95.992	95.492	96.492	0.12331								0	0	0	0.66185	1	40124	40124		1.3295	0.13619	1		+		14610	8833	6807	6837	17308	17308					0.11952145479745013
KKRKRKKKNYN	11	Unmodified	_KKRKRKKKNYN_					0	0	0			REV__tr|A0A553SIU2|A0A553SIU2_NIACILytRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_15520PE=3SV=1	REV__tr|A0A553SIU2|A0A553SIU2_NIACILytRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_15520PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1006042361259	4	373.490214	1489.93175	-0.59861	-0.00022357	0.85053	0.00031766	0.25192	9.4089E-05	373.49045264276	40.432	0.44253	40.432	40.169	40.612	0					25	13	3	0	0	0	0.14606	1	16876	16876		0	0	1	937960	+		14611	14868	6808	6838	17309	17309					0.20637967719085282
KKRKRKKYLKK	11	Unmodified	_KKRKRKKYLKK_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	502.0167114138603	3	502.015583	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.88	1	108.88	108.38	109.38	0								0	0	0	0.63775	1	47005	47005		0	0	1				14612	7714	6809	6839	17310	17310					0.29352892172300926
KKRKRKKYLKK	11	Unmodified	_KKRKRKKYLKK_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	502.0165588259697	3	502.015583	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.09	1	109.09	108.59	109.59	0								0	0	0	0.63775	1	47134	47134		0	0	1				14613	7714	6809	6839	17311	17311					0.29352892172300926
KKRKRKKYLKK	11	Unmodified	_KKRKRKKYLKK_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	502.0161315798759	3	502.015583	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.19	1	109.19	108.69	109.69	0								0	0	0	0.63775	1	47198	47198		0	0	1				14614	7714	6809	6839	17312	17312					0.29352892172300926
KKRKRKKYLKK	11	Unmodified	_KKRKRKKYLKK_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3513976931572	3	502.015583	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.04	1	108.2	107.7	108.7	0.15781								0	0	0	0.63775	1	46624	46624		0	0	1				14615	7714	6809	6839	17313	17313					0.29352892172300926
KKRKRKKYLKK	11	Unmodified	_KKRKRKKYLKK_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|26|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	752.5263549685478	2	752.519737	1503.02492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.79	1	109.94	109.44	110.44	0.15228								0	0	0	0.63775	1	47619	47619		0	0	1				14616	7714	6809	6839	17314	17314					0.29352892172300926
KKRLKKKRQKE	11	Unmodified	_KKRLKKKRQKE_					0	0	0		ENST00000464241.5_1_2:74710222-74719357:+|nuORF;ENSG00000115282|ENST00000233623|TTC31;nc|ENSG00000115282|Q49AM3-2|TTC31	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	ENST00000464241.5_1_2:74710222-74719357:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	735.4886962771416	2	735.491176	1468.9678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.39	1	109.55	109.05	110.05	0.15898								0	0	0	0.63775	1	47497	47497		0	0	1				14617	1910	6810	6840	17315	17315					0.25207424895938857
KKRLYYREKKY	11	Unmodified	_KKRLYYREKKY_					0	0	0		ENST00000499638.6_1_12:121661214-121671021:+|nuORF;ENST00000543318.5_1_12:121659934-121671349:+|nuORF;nc|ENSG00000135124|Q99571-3|P2RX4;ENSG00000135124|ENST00000337233|P2RX4;nc|ENSG00000135124|Q99571-2|P2RX4	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.6468994021416	3	525.643704	1573.90928	2.8556	0.001501	1.4472	0.0007607	4.3027	0.0022617	525.6444826068988	93.902	0.86575	94.047	93.427	94.293	0.14493					38	26	2	0	0	0	1.0402	1	39343	39343		0.094841	0.094841	1	630880			14618	2650	6811	6841	17316	17316					0.1452832353074882
KKRLYYREKKY	11	Unmodified	_KKRLYYREKKY_					0	0	0		ENST00000499638.6_1_12:121661214-121671021:+|nuORF;ENST00000543318.5_1_12:121659934-121671349:+|nuORF;nc|ENSG00000135124|Q99571-3|P2RX4;ENSG00000135124|ENST00000337233|P2RX4;nc|ENSG00000135124|Q99571-2|P2RX4	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	ENST00000499638.6_1_12:121661214-121671021:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.6450683474541	3	525.643704	1573.90928	3.3075	0.0017386	0.83214	0.00043741	4.1396	0.002176	525.6441313507167	92.838	1.3111	94.115	93.486	94.797	1.277					59	40	2	0	0	0	1.0402	1	39054	39054		0.094841	0	1	506940			14619	2650	6811	6841	17317	17317					0.1452832353074882
KKRMKWSLRL	10	Unmodified	_KKRMKWSLRL_					0	0	0			REV__ENST00000356362.6_1_7:105148646-105148826:-|nuORF	REV__ENST00000356362.6_1_7:105148646-105148826:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	673.4187499880791	2	673.416091	1344.81763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.99	1	100.06	99.562	100.56	0.072716								0	0	0	0.66176	1	41867	41867		1.4819	0	1		+		14620	12549	6812	6842	17318	17318					0.1590136163263196
KKRPSGGG	8	Unmodified	_KKRPSGGG_					0	0	0			REV__ENSG00000162402|ENST00000294383|USP24	REV__ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	786.4598876833916	1	786.458062	785.450785	2.6692	0.0020992	0.91795	0.00072193	3.5871	0.0028211	786.4585853177774	106.6	0.14053	106.76	106.68	106.82	0.15781					17	6	3	0	0	0	0.89176	1	45673	45673		0.79363	0	1	101990000	+		14621	10642	6813	6843	17319	17319					0.049477821316258996
KKRQSLVERTV	11	Unmodified	_KKRQSLVERTV_					0	0	0		nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;ENSG00000163092|ENST00000409195|XIRP2	nc|ENSG00000163092|A4UGR9-2|XIRP2	nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	448.7477905154228	3	448.60877	1342.80448	3.4054	0.0015277	-0.79894	-0.00035841	2.6064	0.0011693	448.6083573309561	82.46	0.50201	84.13	83.702	84.205	1.67					29	15	2	0	0	0	0.14606	1	34470	34470		3.8459	0.25323	1	1416500			14622	3663	6814	6844	17320	17320					0.14679202054207963
KKRRRRGRK	9	Unmodified	_KKRRRRGRK_					0	0	0		ENSG00000219481|ENST00000430580|NBPF1;nc|ENSG00000219481|Q3BBV0|NBPF1	ENSG00000219481|ENST00000430580|NBPF1	ENSG00000219481|ENST00000430580|NBPF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	620.9198486208916	2	620.918513	1239.82247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.376	1	14.203	13.703	14.703	0.82789								0	0	0	0.42693	1	5546	5546		0.52476	0.12405	1				14623	5266	6815	6845	17321	17321					0.21215426610251598
KKRRYSTKQ	9	Unmodified	_KKRRYSTKQ_					0	0	0			REV__ENST00000302350.4_2_4:184366770-184367298:+|nuORF	REV__ENST00000302350.4_2_4:184366770-184367298:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8581420779228	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	0.84195	1	31374	31374		1.6526	0.17072	1	3279500	+		14624	12316	6816	6846	17322	17322					0.11018705648439209
KKRTALHLA	9	Unmodified	_KKRTALHLA_					0	0	0		nc|ENSG00000188877|Q6S8J7|POTEA;nc|ENSG00000188877|Q6S8J7-2|POTEA;nc|ENSG00000261239|Q6NSI1|ANKRD26P1	nc|ENSG00000188877|Q6S8J7|POTEA	nc|ENSG00000188877|Q6S8J7|POTEA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5585815310478	3	346.557459	1036.65055	1.4042	0.00048663	3.5138	0.0012177	4.918	0.0017044	346.5582543349455	67.054	0.55699	67.377	67.126	67.683	0.32269					34	18	2	0	0	0	0.82114	1	28056	28056		2.4985	0	1	3333000			14625	7957	6817	6847	17323	17323					0.13368837079360674
KKRVRKPAP	9	Unmodified	_KKRVRKPAP_					0	0	0			REV__ENST00000586178.5_1_17:49296359-49302518:-|nuORF	REV__ENST00000586178.5_1_17:49296359-49302518:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3636962771416	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.457	1	26.141	25.641	26.641	1.6845								0	0	0	0.42693	1	10216	10216		1.8442	0	1		+		14626	14029	6818	6848	17324	17324					0.17252518724649235
KKRVRQRERRA	11	Unmodified	_KKRVRQRERRA_					0	0	0			REV__ENST00000553968.1_1_14:80678377-80678506:-|nuORF	REV__ENST00000553968.1_1_14:80678377-80678506:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1017944216728	4	371.485463	1481.91274	1.5785	0.00058638	0.53041	0.00019704	2.1089	0.00078341	371.73644771554706	48.432	0.8262	48.763	48.43	49.256	0.33034					69	26	3	0	0	0	0.14606	1	20364	20364		0	0	1	3128900	+		14627	13847	6819	6849	17325	17325					0.1910643114802042
KKRVRQRERRA	11	Unmodified	_KKRVRQRERRA_					0	0	0			REV__ENST00000553968.1_1_14:80678377-80678506:-|nuORF	REV__ENST00000553968.1_1_14:80678377-80678506:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1018554568291	4	371.485463	1481.91274	1.3095	0.00048647	0.6432	0.00023894	1.9527	0.00072541	371.7364113816081	47.145	0.95428	48.527	48.219	49.173	1.3825					77	29	3	0	0	0	0.14606	1	19922	19922		0	0	1	3131000	+		14628	13847	6819	6849	17326	17326					0.1910643114802042
KKRVVQIIK	9	Unmodified	_KKRVVQIIK_					0	0	0		tr|A0A7D6W2P1|A0A7D6W2P1_9CLOTNucleotidyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06835PE=4SV=1	tr|A0A7D6W2P1|A0A7D6W2P1_9CLOTNucleotidyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06835PE=4SV=1	tr|A0A7D6W2P1|A0A7D6W2P1_9CLOTNucleotidyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06835PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617370486259	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.44	1	106.44	105.94	106.94	0								0	0	0	0.42693	1	45415	45415		0.23584	0	1				14629	17036	6820	6850	17327	17327					0.20914842698698521
KKRWRGLLLYK	11	Unmodified	_KKRWRGLLLYK_					0	0	0			REV__MMP19|p.A383Lfs*24|1|0.04|ENSG00000123342|chr12:55837596-55837596|C/-|frameshift_variant	REV__MMP19|p.A383Lfs*24|1|0.04|ENSG00000123342|chr12:55837596-55837596|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	366.4883605837822	4	365.98577	1459.91397	1.3121	0.00048023	1.7247	0.00063122	3.0369	0.0011114	365.98649059652007	37.283	0.46283	37.588	37.447	37.91	0.30497					38	19	3	0	0	0	1.0391	1	15681	15681		0.40827	0.31342	1	1971200	+		14630	14366	6821	6851	17328	17328					0.20241252464234094
KKRYKTFAKKK	11	Unmodified	_KKRYKTFAKKK_					0	0	0			REV__ENST00000467870.1_1_14:57445264-57445663:+|nuORF	REV__ENST00000467870.1_1_14:57445264-57445663:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.5504943728447	4	357.231774	1424.89799	1.0876	0.00038854	-0.77708	-0.0002776	0.31055	0.00011094	357.4820020911894	40.339	1.3048	41.649	41.33	42.635	1.3102					85	41	3	0	0	0	0.14606	1	16788	16788		0.40827	0.24894	1	4900200	+		14631	13252	6822	6852	17329	17329					0.2025354622726354
KKRYRKRKNKL	11	Unmodified	_KKRYRKRKNKL_					0	0	0		KMT2C|p.S2184Lfs*11|1|0.1|ENSG00000055609|chr7:152181310-152181310|A/-|frameshift_variant;KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant;ENSG00000055609|ENST00000262189|KMT2C;nc|ENSG00000055609|Q8NEZ4-2|KMT2C;nc|ENSG00000055609|Q8NEZ4-3|KMT2C	KMT2C|p.S2184Lfs*11|1|0.1|ENSG00000055609|chr7:152181310-152181310|A/-|frameshift_variant	KMT2C|p.S2184Lfs*11|1|0.1|ENSG00000055609|chr7:152181310-152181310|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.0607177615166	5	304.403083	1516.97903	-1.9983	-0.00060828	3.2861	0.0010003	1.2879	0.00039203	304.40404430633635	48.301	0.9725	48.301	47.966	48.938	0					46	30	2	0	0	0	0.14606	1	20264	20264		0	0	1	920850			14632	723	6823	6853	17330	17330					0.24122246990054919
KKSKIKTL	8	Unmodified	_KKSKIKTL_					0	0	0		nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;nc|ENSG00000156675|Q6WKZ4-2|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.3270751833916	2	473.326402	944.638252	1.7715	0.0008385	0.096864	4.5848E-05	1.8684	0.00088434	473.32637124553355	107.75	0.23578	107.75	107.62	107.86	0					43	12	5	0	0	0	0.89198	1	46305	46305		0	0	1	823530000			14633	3455	6824	6854	17331	17331					0.16371800616343535
KKSKKGIL	8	Unmodified	_KKSKKGIL_					0	0	0		nc|ENSG00000083307|Q6ISB3-2|GRHL2;ENSG00000083307|ENST00000646743|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.3143493533134	2	451.313295	900.612037	1.1537	0.00052069	0.75881	0.00034246	1.9125	0.00086315	451.3134568205112	107.8	0.21007	107.8	107.68	107.89	0					42	11	5	0	0	0	0.89198	2	46266	46266;46343		0	0	1	624380000			14634	1038	6825	6855	17332;17333	17332					0.1577553144486501
KKSKKGIL	8	Unmodified	_KKSKKGIL_					0	0	0		nc|ENSG00000083307|Q6ISB3-2|GRHL2;ENSG00000083307|ENST00000646743|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2121459841728	3	301.211289	900.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.618	1	11.703	11.203	12.203	0.085046								0	0	0	1.0178	1	4821	4821		0	0	1				14635	1038	6825	6855	17334	17334					0.1577553144486501
KKSKKGIL	8	Unmodified	_KKSKKGIL_					0	0	0		nc|ENSG00000083307|Q6ISB3-2|GRHL2;ENSG00000083307|ENST00000646743|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1284057497978	3	301.211289	900.612037	-0.039635	-1.1938E-05	3.3418	0.0010066	3.3021	0.00099464	301.2123287747201	25.963	1.433	27.68	26.605	28.038	1.7167					65	46	2	0	0	0	2.3239	1	10408	10408		0	0	1	2129700			14636	1038	6825	6855	17335	17335					0.1577553144486501
KKSKKGIL	8	Unmodified	_KKSKKGIL_					0	0	0		nc|ENSG00000083307|Q6ISB3-2|GRHL2;ENSG00000083307|ENST00000646743|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	nc|ENSG00000083307|Q6ISB3-2|GRHL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	301.211289	900.612037	0.28952	8.7205E-05	3.4871	0.0010503	3.7766	0.0011376	301.21231512032836	27.457	0.80776	27.728	27.118	27.926	0.27119	0.024068	6.1405E-05	NaN	0	45	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3456800			14637	1038	6825	6855							0.1577553144486501
KKSKKKPK	8	Unmodified	_KKSKKKPK_					0	0	0			REV__ENSG00000105656|ENST00000262809|ELL	REV__ENSG00000105656|ENST00000262809|ELL	MSMS	GG20161007_CRH_Patient100_A02_02	2	486.3451415896416	2	486.339844	970.665135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.84	1	96.945	96.445	97.445	0.105								0	0	0	1.0178	1	40524	40524		0.69038	0	1		+		14638	9185	6826	6856	17336	17336					0.1786290922751732
KKSPFGGL	8	Unmodified	_KKSPFGGL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;TNRC18|p.K2750Rfs*164|1|0.14|ENSG00000182095|chr7:5312642-5312643|-/C|frameshift_variant;TNRC18|p.R699Lfs*17|1|0.75|ENSG00000182095|chr7:5387728-5387729|-/A|frameshift_variant;TNRC18|p.Y847Sfs*18|1|0.11|ENSG00000182095|chr7:5376915-5376916|-/G|frameshift_variant;TNRC18|p.Y847Rfs*33|1|0.11|ENSG00000182095|chr7:5376916-5376917|-/TGCGCGGGGTGATGGTGGCG|frameshift_variant	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2491027712822	2	417.247621	832.480688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.36	1	103.36	102.86	103.86	0								0	0	0	1.0178	1	43368	43368		0.79363	0	1				14639	4596	6827	6857	17337	17337					0.05774721076966216
KKSRLRGK	8	Unmodified	_KKSRLRGK_					0	0	0			REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.8270141482353	2	486.824892	971.635232	3.2274	0.0015712	1.2106	0.00058933	4.438	0.0021605	486.82542982957636	106.07	0.30926	106.23	106.13	106.44	0.16174					49	16	5	0	0	0	0.88663	1	45253	45253		4.756	0	1	889260000	+		14640	14500	6828	6858	17338	17338					0.14827970282192382
KKSRLRGK	8	Unmodified	_KKSRLRGK_					0	0	0			REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	486.824892	971.635232	3.4897	0.0016989	1.5649	0.00076184	5.0546	0.0024607	486.8255223011467	106.12	0.20422	106.18	106.08	106.29	0.05455	-0.043849	0.00015022	NaN	4.756	25	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	188210000	+		14641	14500	6828	6858							0.14827970282192382
KKSRLRGK	8	Unmodified	_KKSRLRGK_					0	0	0			REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	486.824892	971.635232	3.2282	0.0015716	1.7927	0.00087273	5.0209	0.0024443	486.82571924988457	106.1	0.29006	106.26	106.16	106.45	0.15781	0.035227	0.000372	NaN	4.756	48	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	966120000	+		14642	14500	6828	6858							0.14827970282192382
KKSRLRGK	8	Unmodified	_KKSRLRGK_					0	0	0			REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	REV__nc|ENSG00000181982|Q6ZUS6-3|CCDC149	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	486.824892	971.635232	3.2274	0.0015712	1.2106	0.00058933	4.438	0.0021605	486.82542982957636	106.07	0.30926	106.23	106.13	106.44	0.16174	0.0086216	-0.00019479	NaN	4.756	49	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	889260000	+		14643	14500	6828	6858							0.14827970282192382
KKSRPLTGL	9	Unmodified	_KKSRPLTGL_					0	0	0		nc|ENSG00000071246|Q7L8A9-2|VASH1;ENSG00000071246|ENST00000167106|VASH1	nc|ENSG00000071246|Q7L8A9-2|VASH1	nc|ENSG00000071246|Q7L8A9-2|VASH1	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3204528689384	2	500.319109	998.623664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.26	1	104.32	103.82	104.82	0.059502								0	0	0	0.42693	1	43927	43927		3.9444	1.6417	1				14644	868	6829	6859	17339	17339					0.12429728468180201
KKSWFIEPAPL	11	Unmodified	_KKSWFIEPAPL_					0	0	0			REV__nc|ENSG00000162692|P19320-2|VCAM1	REV__nc|ENSG00000162692|P19320-2|VCAM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	658.3791992068291	2	658.374081	1314.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.969	1	96.157	95.657	96.657	1.1887								0	0	0	0.63775	1	39954	39954		6.2058	1.3088	1		+		14645	10656	6830	6860	17340	17340					0.08883109016733215
KKTGRGGR	8	Unmodified	_KKTGRGGR_					0	0	0		tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.2657348513603	2	430.264668	858.514782	0.95176	0.00040951	1.2882	0.00055428	2.24	0.00096379	430.2649031459489	71.066	0.69011	71.066	70.567	71.257	0					36	21	3	0	0	0	0.89178	1	29559	29559		0.69038	0	1	2705300			14646	16307	6831	6861	17341	17341					0.07986562288567711
KKTGRGGR	8	Unmodified	_KKTGRGGR_					0	0	0		tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.2655212283134	2	430.264668	858.514782	1.006	0.00043285	0.47949	0.00020631	1.4855	0.00063916	430.26480921746594	71.908	0.47409	71.908	71.668	72.142	0					37	14	4	0	0	0	0.89178	1	29986	29986		0.69038	0	1	12371000			14647	16307	6831	6861	17342	17342					0.07986562288567711
KKTLAKIAL	9	Unmodified	_KKTLAKIAL_					0	0	0		tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	985.6795532107353	1	985.676828	984.669552	4.1805	0.0041206	-1.7184	-0.0016938	2.4621	0.0024268	985.6748865890697	108.18	0.1185	108.34	108.27	108.39	0.15781					20	9	3	0	0	0	0.84195	1	46683	46683		1.6526	0	1	73768000			14648	17292	6832	6862	17343	17343					0.17660373650392103
KKTLAKIAL	9	Unmodified	_KKTLAKIAL_					0	0	0		tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	tr|A0A7D7A4W4|A0A7D7A4W4_9CLOTLacIfamilyDNA-bindingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	985.6777831912041	1	985.676828	984.669552	3.5646	0.0035136	-2.1835	-0.0021523	1.3811	0.0013613	985.6743614973412	108.14	0.10799	108.3	108.24	108.35	0.15795					19	12	3	0	0	0	0.84195	1	46617	46617		1.6526	0	1	67784000			14649	17292	6832	6862	17344	17344					0.17660373650392103
KKTQRHPVNQT	11	Unmodified	_KKTQRHPVNQT_					0	0	0		ENST00000468790.1_1_10:115479033-115479252:+|nuORF	ENST00000468790.1_1_10:115479033-115479252:+|nuORF	ENST00000468790.1_1_10:115479033-115479252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	668.8742553591728	2	668.875842	1335.73713	1.7965	0.0012016	-3.3237	-0.0022231	-1.5272	-0.0010215	669.3751995821868	54.378	0.51425	56.347	56.096	56.61	1.9684					22	16	2	0	0	0	0.83687	1	22822	22822		13.615	0.74226	1	3223900			14650	6721	6833	6863	17345	17345					0.08269171843267031
KKVAVPKK	8	Unmodified	_KKVAVPKK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	897.6322509646416	1	897.624399	896.617122	2.9024	0.0026053	3.7844	0.003397	6.6869	0.0060023	897.6268815567698	108.19	0.11428	108.35	108.31	108.42	0.15781					19	7	3	0	0	0	0.89051	1	46704	46704		2.3027	0	1	203470000			14651	3425;7900	6834	6864	17346	17346					0.16467835307469159
KKVAVPKK	8	Unmodified	_KKVAVPKK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	897.6293823122978	1	897.624399	896.617122	3.0803	0.0027649	1.9718	0.00177	5.0521	0.0045349	897.6258334889543	108.16	0.09803	108.32	108.27	108.37	0.15795					31	11	3	0	0	0	0.89051	1	46626	46626		2.3027	0	1	160610000			14652	3425;7900	6834	6864	17347	17347					0.16467835307469159
KKVEEKRIILP	11	Unmodified	_KKVEEKRIILP_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.9706909060478	4	338.971057	1351.85512	-0.58807	-0.00019934	-2.4047	-0.00081512	-2.9928	-0.0010145	338.97054425648236	31.706	0.77863	32.987	32.501	33.28	1.2813					71	25	5	0	0	0	1.0191	1	13377	13377		2.6312	1.4164	1	7235700			14653	3425;7900	6835	6865	17348	17348					0.19326731379237572
KKVKAMKC	8	Unmodified	_KKVKAMKC_					0	0	0			REV__ENST00000358691.9_2_17:65072815-65072944:-|nuORF	REV__ENST00000358691.9_2_17:65072815-65072944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2802917361259	2	468.280083	934.545614	1.6328	0.00076461	-0.88378	-0.00041386	0.74902	0.00035075	468.27962846642407	103.47	0.056366	103.47	103.43	103.48	0					4	2	2	0	0	0	0.89178	1	43435	43435		0.69038	0.088878	1	32751000	+		14654	12576	6836	6866	17349	17349					0.07572256286937318
KKVKHRLV	8	Unmodified	_KKVKHRLV_					0	0	0		nc|ENSG00000100151|Q9NRD5-2|PICK1;ENST00000484021.5_1_22:38453431-38470088:+|nuORF;ENSG00000100151|ENST00000356976|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	336.2381774783134	3	336.566066	1006.67637	-0.0046347	-1.5599E-06	0.16114	5.4235E-05	0.15651	5.2675E-05	336.56650541981986	22.611	0.48259	24.263	23.954	24.436	1.6511					23	15	2	0	0	0	2.3239	1	9424	9424		0	0	1	368760			14655	1248	6837	6867	17350	17350					0.17329731321660802
KKVKKGKK	8	Unmodified	_KKVKKGKK_					0	0	0			REV__ENSG00000170807|ENST00000458573|LMOD2	REV__ENSG00000170807|ENST00000458573|LMOD2	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.2317687869072	3	315.230683	942.67022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1921	1	1.9405	1.4405	2.4405	0.7484								0	0	0	1.0178	1	493	493		0	0	1		+		14656	10997	6838	6868	17351	17351					0.19659213090130834
KKVKQLKKKSI	11	Unmodified	_KKVKQLKKKSI_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|102|3|sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|102|3|sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|102|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4636718630791	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.37	1	108.37	107.87	108.87	0								0	0	0	0.63775	1	46685	46685		0.26902	0.26902	1				14657	7596	6839	6869	17352	17352					0.25711314512841454
KKVKRKVK	8	Unmodified	_KKVKRKVK_					0	0	0		ENST00000371826.3_1_10:91066380-91066419:+|nuORF	ENST00000371826.3_1_10:91066380-91066419:+|nuORF	ENST00000371826.3_1_10:91066380-91066419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3705627322197	2	507.368936	1012.72332	3.0378	0.0015413	0.51892	0.00026328	3.5567	0.0018045	507.36893044166914	104.53	0.4427	104.59	104.37	104.82	0.056801					56	23	3	0	0	0	0.89198	2	44068	44068;44160		0	0	1	26816000			14658	6130	6840	6870	17353;17354	17353					0.21746590872794513
KKVLPSPL	8	Unmodified	_KKVLPSPL_					0	0	0		ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant;ASXL3|p.E1581Hfs*38|1|0.44|ENSG00000141431|chr18:33744587-33744588|-/ACACCCGACCG|frameshift_variant;ENSG00000141431|ENST00000269197|ASXL3	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2995788455009	2	441.294571	880.574589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.71	1	109.87	109.37	110.37	0.16133								0	0	0	1.0178	1	47662	47662		2.5775	0	1				14659	86	6841	6871	17355	17355					0.1295244017924233
KKVLPSPL	8	Unmodified	_KKVLPSPL_					0	0	0		ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant;ASXL3|p.E1581Hfs*38|1|0.44|ENSG00000141431|chr18:33744587-33744588|-/ACACCCGACCG|frameshift_variant;ENSG00000141431|ENST00000269197|ASXL3	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2992736697197	2	441.294571	880.574589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.83	1	109.99	109.49	110.49	0.16133								0	0	0	1.0178	1	47717	47717		2.5775	0	1				14660	86	6841	6871	17356	17356					0.1295244017924233
KKVLPSPL	8	Unmodified	_KKVLPSPL_					0	0	0		ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant;ASXL3|p.E1581Hfs*38|1|0.44|ENSG00000141431|chr18:33744587-33744588|-/ACACCCGACCG|frameshift_variant;ENSG00000141431|ENST00000269197|ASXL3	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	ASXL3|p.K901Nfs*40|1|0.07|ENSG00000141431|chr18:33740106-33740107|-/TATTGAATACTACATTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2998840212822	2	441.294571	880.574589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.68	1	109.83	109.33	110.33	0.15228								0	0	0	1.0178	1	47572	47572		2.5775	0	1				14661	86	6841	6871	17357	17357					0.1295244017924233
KKVPAAPI	8	Unmodified	_KKVPAAPI_					0	0	0		ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	ENSG00000196700|ENST00000369888|ZNF512B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	412.5235473513603	2	412.273638	822.532724	0.26885	0.00011084	-1.945	-0.00080186	-1.6761	-0.00069102	412.2727547916496	34.405	0.54851	34.405	34.131	34.68	0					28	17	2	0	0	0	2.3239	1	14374	14374		0.79363	0	1	1815400			14662	4960	6842	6872	17358	17358					0.1143588449069739
KKVRLWIFFKQ	11	Unmodified	_KKVRLWIFFKQ_					0	0	0			REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	REV__ENST00000376083.7_2_9:88296229-88307675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.3112060427666	3	498.309885	1491.90782	2.2029	0.0010977	0.79233	0.00039482	2.9953	0.0014926	498.3100895632981	88.952	0.76305	88.952	88.701	89.464	0					38	23	2	0	0	0	1.039	1	37343	37343		0.45452	0.35968	1	1352500	+		14663	12719	6843	6873	17359	17359					0.1815473423266667
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.161	1	12.25	11.75	12.75	0.089381								0	0	0	0.42693	1	5046	5046		0.23584	0.23584	1		+		14664	11222	6844	6874	17360	17360					0.22265647447261472
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.897	1	20.09	19.59	20.59	0.19342								0	0	0	0.42693	1	8267	8267		0.23584	0.23584	1		+		14665	11222	6844	6874	17361	17361					0.22265647447261472
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.479	1	13.173	12.673	13.673	0.69396								0	0	0	0.42693	1	5183	5183		0.23584	0.23584	1		+		14666	11222	6844	6874	17362	17362					0.22265647447261472
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.693	1	13.387	12.887	13.887	0.69396								0	0	0	0.42693	1	5272	5272		0.23584	0.23584	1		+		14667	11222	6844	6874	17363	17363					0.22265647447261472
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.286	1	12.048	11.548	12.548	0.76165								0	0	0	0.42693	1	4688	4688		0.23584	0.23584	1		+		14668	11222	6844	6874	17364	17364					0.22265647447261472
KKVSKKKKR	9	Unmodified	_KKVSKKKKR_					0	0	0			REV__nc|ENSG00000177679|A6NNA2|SRRM3	REV__nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2676879763603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.197	1	20.721	20.221	21.221	1.5237								0	0	0	0.42693	1	7980	7980		0.23584	0.23584	1		+		14669	11222	6844	6874	17365	17365					0.22265647447261472
KKVSLLLAT	9	Unmodified	_KKVSLLLAT_					0	0	0			REV__VPS45|p.L169V|1|0.09|ENSG00000136631|chr1:150077160-150077160|C/G|missense_variant	REV__VPS45|p.L169V|1|0.09|ENSG00000136631|chr1:150077160-150077160|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.6482421755791	1	972.645194	971.637917	1.1913	0.0011587	0.45461	0.00044217	1.6459	0.0016009	972.6455730656805	107.69	0.22084	107.69	107.58	107.81	0					41	11	5	0	0	0	0.85019	1	46193	46193		0.52476	0	1	706870000	+		14670	15935	6845	6875	17366	17366					0.1509638089648888
KKVSLLLAT	9	Unmodified	_KKVSLLLAT_					0	0	0			REV__VPS45|p.L169V|1|0.09|ENSG00000136631|chr1:150077160-150077160|C/G|missense_variant	REV__VPS45|p.L169V|1|0.09|ENSG00000136631|chr1:150077160-150077160|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.8268920779228	2	486.826235	971.637917	1.2025	0.00058539	0.82997	0.00040405	2.0324	0.00098944	486.8266921714306	107.7	0.27515	107.7	107.58	107.86	0					49	14	5	0	0	0	0.85019	1	46275	46275		0.52476	0	1	789060000	+		14671	15935	6845	6875	17367	17367					0.1509638089648888
KKVVPAVL	8	Unmodified	_KKVVPAVL_					0	0	0			REV__ENSG00000136875|ENST00000374198|PRPF4	REV__ENSG00000136875|ENST00000374198|PRPF4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	427.3792297244072	2	427.297114	852.579674	3.0903	0.0013205	-0.55261	-0.00023613	2.5377	0.0010843	427.29654632156087	109.16	0.63904	109.21	108.91	109.55	0.048843					58	27	3	0	0	0	2.3239	1	46873	46873		2.8892	0.31174	1	22557000	+		14672	9998	6846	6876	17368	17368					0.14748744041844475
KKWMILCIL	9	Unmodified	_KKWMILCIL_					0	0	0			REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.3403198122978	2	574.340141	1146.66573	1.3442	0.00077201	-0.81531	-0.00046827	0.52886	0.00030375	574.3390747421897	96.972	0.18724	96.972	96.862	97.049	0					14	5	3	0	0	0	0.84963	1	40537	40537		0.6015	0	1	2341000	+		14673	12437	6847	6877	17369	17369					0.09826244560690611
KKWMILCIL	9	Unmodified	_KKWMILCIL_					0	0	0			REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	574.340141	1146.66573	1.3442	0.00077201	-0.81531	-0.00046827	0.52886	0.00030375	574.3390747421897	96.972	0.18724	96.972	96.862	97.049	0	-0.002943	0.0005529	NaN	0.6015	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2341000	+		14674	12437	6847	6877							0.09826244560690611
KKWMILCIL	9	Unmodified	_KKWMILCIL_					0	0	0			REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	REV__ENST00000328090.9_2_10:5784070-5784100:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	574.340141	1146.66573	3.7888	0.0021761	-4.6263	-0.0026571	-0.83748	-0.000481	574.3362818838114	96.653	0.15404	96.938	96.892	97.047	0.28442	-0.037093	-0.0038247	NaN	0.6015	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	852410	+		14675	12437	6847	6877							0.09826244560690611
KKYGKKIKK	9	Unmodified	_KKYGKKIKK_					0	0	0		tr|A0A7D6ZYU5|A0A7D6ZYU5_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17880PE=3SV=1	tr|A0A7D6ZYU5|A0A7D6ZYU5_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17880PE=3SV=1	tr|A0A7D6ZYU5|A0A7D6ZYU5_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17880PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2551757693291	3	374.257009	1119.7492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.654	1	99.654	99.154	100.15	0								0	0	0	0.42693	1	41713	41713		0.26902	0	1				14676	17200	6848	6878	17370	17370					0.19411440324415707
KKYRKKIWTKF	11	Unmodified	_KKYRKKIWTKF_					0	0	0		tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0396606326103	5	305.993134	1524.92929	-3.1312	-0.00095813	-0.65466	-0.00020032	-3.7859	-0.0011584	306.1927051084276	21.268	0.27969	21.268	21.004	21.284	0					11	8	2	0	0	0	0.14606	1	8798	8798		0	0	1	102380			14677	16873	6849	6879	17371	17371					0.1878211926136828
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8445312380791	2	575.841894	1149.66923	1.6529	0.00095179	3.6381	0.002095	5.2909	0.0030467	575.8429426620804	73.607	0.67172	73.607	73.312	73.983	0					30	21	2	0	0	0	0.83753	1	30706	30706		1.8442	0.51471	1	1011500			14678	4657	6850	6880	17372	17372					0.10038630658914371
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8444091677666	2	575.841894	1149.66923	1.705	0.00098179	2.4681	0.0014213	4.1731	0.0024031	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.83753	1	31749	31749		1.8442	0.19162	1	3135100			14679	4657	6850	6880	17373	17373					0.10038630658914371
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8445922732353	2	575.841894	1149.66923	2.13	0.0012265	0.72072	0.00041502	2.8507	0.0016415	575.8427526825832	73.255	0.79836	73.58	73.371	74.169	0.32494					33	25	2	0	0	0	0.83753	2	30600	30600;30697		1.8442	0.19162	1	1472100			14680	4657	6850	6880	17374;17375	17374					0.10038630658914371
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8436157107353	2	575.841894	1149.66923	2.1198	0.0012207	2.7998	0.0016123	4.9197	0.0028329	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.83753	4	31868	31868;31917;31966;32221		1.8442	0.51471	1	3953600			14681	4657	6850	6880	17376;17377;17378;17379	17376					0.10038630658914371
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8447753787041	2	575.841894	1149.66923	3.3483	0.0019281	1.3546	0.00078004	4.7029	0.0027081	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.79362	1	31073	31073		3.5965	0.31518	1	7218900			14682	4657	6850	6880	17380	17380					0.10038630658914371
KKYRSIMPK	9	Unmodified	_KKYRSIMPK_					0	0	0		nc|ENSG00000183621|Q7Z4V0-3|ZNF438;nc|ENSG00000183621|Q7Z4V0-2|ZNF438;ENSG00000183621|ENST00000436087|ZNF438;ZNF438|p.L430Q|1|0.08|ENSG00000183621|chr10:30849116-30849116|A/T|missense_variant	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	nc|ENSG00000183621|Q7Z4V0-3|ZNF438	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8425170779228	2	575.841894	1149.66923	2.5416	0.0014636	2.6939	0.0015513	5.2355	0.0030148	575.8431631757659	75.333	0.92003	76.639	76.374	77.294	1.3063					71	29	3	0	0	0	0.84195	1	31612	31612		1.6526	0	1	1861900			14683	4657	6850	6880	17381	17381					0.10038630658914371
KLAALREPP	9	Unmodified	_KLAALREPP_					0	0	0			REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2077209353447	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.559	1	94.704	94.204	95.204	0.14493								0	0	0	0.42693	1	39575	39575		1.1933	0.12188	1		+		14684	13260	6851	6881	17382	17382					0.10006039576853709
KLAALREPP	9	Unmodified	_KLAALREPP_					0	0	0			REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2077209353447	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.692	1	94.82	94.32	95.32	0.12825								0	0	0	0.42693	1	39629	39629		1.1933	0.12188	1		+		14685	13260	6851	6881	17383	17383					0.10006039576853709
KLAALREPP	9	Unmodified	_KLAALREPP_					0	0	0			REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	REV__ENST00000468564.6_1_22:44584872-44587985:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2079040408134	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.026	1	95.149	94.649	95.649	0.12331								0	0	0	0.42693	1	39765	39765		1.1933	0.12188	1		+		14686	13260	6851	6881	17384	17384					0.10006039576853709
KLADISINYV	10	Unmodified	_KLADISINYV_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3210327029228	2	568.321514	1134.62847	2.2648	0.0012871	-2.0429	-0.001161	0.22191	0.00012611	568.3194883829879	49.653	0.27791	51.044	50.888	51.166	1.3911					20	8	3	0	0	0	0.2264	1	20789	20789		45.74	7.5643	1	1913200			14687	5095	6852	6882	17385	17385					0.06654567820260127
KLADISINYV	10	Unmodified	_KLADISINYV_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3209106326103	2	568.321514	1134.62847	1.791	0.0010178	-1.4007	-0.00079603	0.39029	0.00022181	568.3203671005215	49.084	0.30641	51.061	50.917	51.223	1.9772					20	9	3	0	0	0	0.24073	1	20554	20554		43.982	12.714	1	1969300			14688	5095	6852	6882	17386	17386					0.06654567820260127
KLADISINYV	10	Unmodified	_KLADISINYV_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	568.321514	1134.62847	1.6065	0.00091299	0.2544	0.00014458	1.8609	0.0010576	568.3215795827896	50.805	0.21611	51.133	50.981	51.197	0.32824	0.0045756	0.0011564	NaN	45.74	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	496640			14689	5095	6852	6882							0.06654567820260127
KLAKVIRLKH	10	Unmodified	_KLAKVIRLKH_					0	0	0			REV__tr|A0A7D6ZFW7|A0A7D6ZFW7_9CLOTP-typeCa(2+)transporterOS=ClostridiumintestinaleOX=36845GN=HZF06_16745PE=4SV=1	REV__tr|A0A7D6ZFW7|A0A7D6ZFW7_9CLOTP-typeCa(2+)transporterOS=ClostridiumintestinaleOX=36845GN=HZF06_16745PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4171020388603	2	603.413875	1204.8132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.75	1	109.91	109.41	110.41	0.16133								0	0	0	0.6624	1	47679	47679		0.40072	0	1		+		14690	15636	6853	6883	17387	17387					0.218982204813301
KLALGLDLYL	10	Unmodified	_KLALGLDLYL_					0	0	0		SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant;SLC5A4|p.C517Ffs*46|1|0.16|ENSG00000100191|chr22:32224382-32224383|-/CATACATGCATACAATAAAAGGCAAAGA|frameshift_variant;ENSG00000100191|ENST00000266086|SLC5A4	SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant	SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8465453982353	2	559.844625	1117.6747	3.5512	0.0019881	1.3634	0.0007633	4.9146	0.0027514	559.8449650969833	73.414	0.37807	74.732	74.526	74.904	1.318					32	11	4	0	0	0	0.31869	1	30827	30827		38.176	3.7738	1	4952300			14691	1250	6854	6884	17388	17388					0.12056632722351424
KLALLLPILL	10	Unmodified	_KLALLLPILL_					0	0	0			REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	369.6006957888603	3	369.601894	1105.78385	-1.1768	-0.00043494	-4.0355	-0.0014915	-5.2123	-0.0019265	369.6004491174945	101.48	0.36376	101.48	101.32	101.68	0					40	11	5	0	0	0	0.89803	2	42460	42460;42511		0.15932	0	1	84752000	+		14692	11957	6855	6885	17389;17390	17389					0.23519263412526925
KLALLLPILL	10	Unmodified	_KLALLLPILL_					0	0	0			REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	369.6024047732353	3	369.601894	1105.78385	2.921	0.0010796	-4.4221	-0.0016344	-1.5011	-0.0005548	369.5998534801201	101.23	0.31096	101.42	101.31	101.62	0.19076					23	9	4	0	0	0	0.89803	1	42566	42566		0.15932	0	1	8320100	+		14693	11957	6855	6885	17391	17391					0.23519263412526925
KLALLLPILL	10	Unmodified	_KLALLLPILL_					0	0	0			REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	369.601894	1105.78385	-1.1768	-0.00043494	-4.0355	-0.0014915	-5.2123	-0.0019265	369.6004491174945	101.48	0.36376	101.48	101.32	101.68	0	0.026526	0.00067371	NaN	0.15932	40	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	84752000	+		14694	11957	6855	6885							0.23519263412526925
KLALLLPILL	10	Unmodified	_KLALLLPILL_					0	0	0			REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	369.601894	1105.78385	2.5753	0.00095185	-5.1592	-0.0019068	-2.5838	-0.00095499	369.6000117345356	101.4	0.34212	101.47	101.33	101.67	0.067009	0.012621	-0.00057219	NaN	0.15932	35	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50540000	+		14695	11957	6855	6885							0.23519263412526925
KLALLLPILL	10	Unmodified	_KLALLLPILL_					0	0	0			REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	REV__nc|ENSG00000253649|A0A1B0GVH4|PRSS51	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	369.601894	1105.78385	2.921	0.0010796	-4.4221	-0.0016344	-1.5011	-0.0005548	369.5998534801201	101.23	0.31096	101.42	101.31	101.62	0.19076	-0.039147	0.00024509	NaN	0.15932	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8320100	+		14696	11957	6855	6885							0.23519263412526925
KLALLLPWA	9	Unmodified	_KLALLLPWA_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.8291503787041	2	512.83132	1023.64809	2.371	0.0012159	-2.8184	-0.0014454	-0.44739	-0.00022944	512.8277672553219	82.432	0.33921	82.432	82.246	82.585	0					21	10	3	0	0	0	0.20671	1	34359	34359		32.305	20.065	1	1734200			14697	3583	6856	6886	17392	17392					0.13720988621696506
KLALLLPWA	9	Unmodified	_KLALLLPWA_					0	0	0		nc|ENSG00000160963|Q96A83-2|COL26A1;ENSG00000160963|ENST00000313669|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	nc|ENSG00000160963|Q96A83-2|COL26A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	512.83132	1023.64809	2.2681	0.0011631	-5.5239	-0.0028328	-3.2559	-0.0016697	512.8280492197422	81.797	0.30692	82.077	81.906	82.213	0.2802	-0.091762	0.00068047	NaN	32.305	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2637600			14698	3583	6856	6886							0.13720988621696506
KLALNLNK	8	Unmodified	_KLALNLNK_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	457.2966186404228	2	457.295102	912.575651	3.481	0.0015918	0.60039	0.00027456	4.0814	0.0018664	457.295244351548	106.61	0.1526	106.77	106.69	106.84	0.16174					17	7	3	0	0	0	0.89178	1	45630	45630		0.69038	0	1	32065000	+		14699	14197	6857	6887	17393	17393					0.11586654548136721
KLALNLNK	8	Unmodified	_KLALNLNK_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	457.295102	912.575651	3.3614	0.0015372	0.70155	0.00032081	4.063	0.001858	457.29520977893003	106.62	0.14178	106.78	106.7	106.84	0.15781	0.0036782	4.3799E-05	NaN	0.69038	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24364000	+		14700	14197	6857	6887							0.11586654548136721
KLALNLNK	8	Unmodified	_KLALNLNK_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|76|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	457.295102	912.575651	3.481	0.0015918	0.60039	0.00027456	4.0814	0.0018664	457.295244351548	106.61	0.1526	106.77	106.69	106.84	0.16174	-0.0036782	-4.8717E-05	NaN	0.69038	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32065000	+		14701	14197	6857	6887							0.11586654548136721
KLAVRIKQKP	10	Unmodified	_KLAVRIKQKP_					0	0	0			REV__ENSG00000023608|ENST00000216294|SNAPC1	REV__ENSG00000023608|ENST00000216294|SNAPC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2684509158134	3	394.267797	1179.78156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.767	1	31.05	30.55	31.55	1.2825								0	0	0	0.66222	1	12490	12490		0.69767	0.07084	1		+		14702	8564	6858	6888	17394	17394					0.19886227727420192
KLCGKAIV	8	Unmodified	_KLCGKAIV_					0	0	0			REV__ENSG00000145743|ENST00000542267|FBXL17	REV__ENSG00000145743|ENST00000542267|FBXL17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2597228884697	2	416.259674	830.504795	2.8677	0.0011937	-0.91785	-0.00038206	1.9498	0.00081163	416.2597747645302	74.524	0.2797	74.849	74.709	74.989	0.32464					12	8	2	0	0	0	0.89178	1	31183	31183		0.69038	0	1	787440	+		14703	10286	6859	6889	17395	17395					0.08276238238954647
KLCGKAIV	8	Unmodified	_KLCGKAIV_					0	0	0			REV__ENSG00000145743|ENST00000542267|FBXL17	REV__ENSG00000145743|ENST00000542267|FBXL17	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	416.259674	830.504795	0.77291	0.00032173	0.30133	0.00012543	1.0742	0.00044716	416.260129268124	74.794	0.18933	74.794	74.683	74.872	0	-0.027541	0.00080019	NaN	0.69038	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386570	+		14704	10286	6859	6889							0.08276238238954647
KLCGKAIV	8	Unmodified	_KLCGKAIV_					0	0	0			REV__ENSG00000145743|ENST00000542267|FBXL17	REV__ENSG00000145743|ENST00000542267|FBXL17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	416.259674	830.504795	2.8677	0.0011937	-0.91785	-0.00038206	1.9498	0.00081163	416.2597747645302	74.524	0.2797	74.849	74.709	74.989	0.32464	0.027541	-0.0002148	NaN	0.69038	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	787440	+		14705	10286	6859	6889							0.08276238238954647
KLDAFVEGV	9	Unmodified	_KLDAFVEGV_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2698547244072	2	489.26875	976.522947	2.3225	0.0011363	0.41427	0.00020269	2.7368	0.001339	489.26891664780334	41.37	0.44755	42.696	42.493	42.94	1.3254					31	13	3	0	0	0	0.019486	2	17339	17339;17394		99.755	7.102	1	6503200			14706	3408	6860	6890	17396;17397	17396					0.03374651694673503
KLDAFVEGV	9	Unmodified	_KLDAFVEGV_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2697326540947	2	489.26875	976.522947	2.0959	0.0010254	0.68297	0.00033415	2.7788	0.0013596	489.2689977110557	40.953	0.38236	42.845	42.641	43.024	1.8927					33	11	4	0	0	0	0.0080158	2	17179	17142;17179		110.67	7.3212	1	7475500			14707	3408	6860	6890	17398;17399	17399					0.03374651694673503
KLDMLVASV	9	Unmodified	_KLDMLVASV_					0	0	0		nc|ENSG00000160200|P35520-2|CBS;ENSG00000160200|ENST00000398165|CBS	nc|ENSG00000160200|P35520-2|CBS	nc|ENSG00000160200|P35520-2|CBS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2816955447197	2	488.280803	974.547053	1.8259	0.00089156	-0.2794	-0.00013643	1.5465	0.00075514	488.28065424206216	49.187	0.31319	50.578	50.421	50.735	1.3911					21	9	3	0	0	0	0.19659	1	20632	20632		33.445	0.65921	1	1466200			14708	3545	6861	6891	17400	17400					0.058761688566846715
KLDMLVASV	9	Unmodified	_KLDMLVASV_					0	0	0		nc|ENSG00000160200|P35520-2|CBS;ENSG00000160200|ENST00000398165|CBS	nc|ENSG00000160200|P35520-2|CBS	nc|ENSG00000160200|P35520-2|CBS	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	488.280803	974.547053	1.9929	0.00097311	0.46964	0.00022931	2.4626	0.0012024	488.28088632724734	48.682	0.27819	50.659	50.483	50.761	1.9772	0.040259	0.00046755	NaN	33.445	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1430600			14709	3545	6861	6891							0.058761688566846715
KLDQINLFL	9	Unmodified	_KLDQINLFL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3290283083916	2	552.326599	1102.63865	1.8515	0.0010227	0.97982	0.00054118	2.8314	0.0015638	552.3272062163334	67.878	0.33161	69.256	69.096	69.427	1.3778					16	10	2	0	0	0	0.16939	1	28494	28494		36.506	6.6656	1	1335300			14710	2540	6862	6892	17401	17401					0.09143175545523263
KLDQINLFL	9	Unmodified	_KLDQINLFL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.326599	1102.63865	1.1953	0.00066022	-0.15787	-8.7194E-05	1.0375	0.00057302	552.3265117046722	67.29	0.27148	69.16	69.09	69.362	1.87	-0.047725	-0.0006866	NaN	36.506	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1015000			14711	2540	6862	6892							0.09143175545523263
KLDVGNAEV	9	Unmodified	_KLDVGNAEV_					0	0	0		nc|ENSG00000185825|P51572-2|BCAP31;ENSG00000185825|ENST00000345046|BCAP31	nc|ENSG00000185825|P51572-2|BCAP31	nc|ENSG00000185825|P51572-2|BCAP31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7562744021416	2	472.756007	943.497461	1.3119	0.00062023	0.51591	0.0002439	1.8279	0.00086413	472.75595885956875	22.529	0.25013	23.743	23.609	23.859	1.2145					17	7	3	0	0	0	0.099302	1	9409	9409		49.554	1.2084	1	1111100			14712	4763	6863	6893	17402	17402					0.023451771722420744
KLDWHLVFL	9	Unmodified	_KLDWHLVFL_					0	0	0		ENST00000529958.1_1_11:6703351-6704139:-|nuORF	ENST00000529958.1_1_11:6703351-6704139:-|nuORF	ENST00000529958.1_1_11:6703351-6704139:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2848083376884	3	390.893848	1169.65972	2.6446	0.0010338	0.57024	0.0002229	3.2148	0.0012567	390.8936352741921	74.712	0.53051	76.494	76.292	76.822	1.7817					30	16	3	0	0	0	0.11909	1	31335	31335		0.96228	0	1	909980			14713	7157	6864	6894	17403	17403					0.08167185645038444
KLEAARRVIA	10	Unmodified	_KLEAARRVIA_					0	0	0			REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8585082888603	2	563.85639	1125.69823	3.2036	0.0018064	0.29707	0.0001675	3.5007	0.0019739	563.8561208833983	106.01	0.18645	106.17	106.1	106.28	0.15859					19	9	3	0	0	0	0.86043	1	45283	45283		5.7319	1.7875	1	74147000	+		14714	15767	6865	6895	17404	17404					0.14040491279570233
KLEAARRVIA	10	Unmodified	_KLEAARRVIA_					0	0	0			REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	563.85639	1125.69823	2.6589	0.0014993	1.4068	0.00079324	4.0657	0.0022925	563.8556049249178	106.04	0.11006	106.1	106.04	106.15	0.05455	-0.041567	0.0017468	NaN	5.7319	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13322000	+		14715	15767	6865	6895							0.14040491279570233
KLEAARRVIA	10	Unmodified	_KLEAARRVIA_					0	0	0			REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	563.85639	1125.69823	3.2036	0.0018064	0.29707	0.0001675	3.5007	0.0019739	563.8561208833983	106.01	0.18645	106.17	106.1	106.28	0.15859	0.031348	0.00049532	NaN	5.7319	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74147000	+		14716	15767	6865	6895							0.14040491279570233
KLEAARRVIA	10	Unmodified	_KLEAARRVIA_					0	0	0			REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	REV__tr|A0A7D6ZXV6|A0A7D6ZXV6_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00630PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	563.85639	1125.69823	3.2523	0.0018338	-0.81128	-0.00045744	2.441	0.0013764	563.8557472639194	105.99	0.13488	106.15	106.07	106.2	0.16174	0.010219	-0.00075457	NaN	5.7319	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59302000	+		14717	15767	6865	6895							0.14040491279570233
KLEKDNWLL	9	Unmodified	_KLEKDNWLL_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8272582888603	2	579.829506	1157.64446	0.30132	0.00017471	-2.6929	-0.0015615	-2.3916	-0.0013867	579.8276856277087	18.149	0.3827	19.597	19.375	19.758	1.448					31	12	3	0	0	0	0.61249	1	7547	7547		10.824	0.024421	1	3692500			14718	2270	6866	6896	17405	17405					0.07194274057178518
KLEKKIWKDR	10	Unmodified	_KLEKKIWKDR_					0	0	0			REV__SMC3|p.A414Mfs*36|1|0.05|ENSG00000108055|chr10:110584329-110584330|-/AA|frameshift_variant	REV__SMC3|p.A414Mfs*36|1|0.05|ENSG00000108055|chr10:110584329-110584330|-/AA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4120971560478	2	672.411529	1342.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.234	1	84.422	83.922	84.922	1.1879								0	0	0	0.66227	1	34937	34937		0.35063	0.35063	1		+		14719	9245	6867	6897	17406	17406					0.15081291547903675
KLEKLFLN	8	Unmodified	_KLEKLFLN_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;CDK5RAP2|p.Y1498Gfs*4|1|0.29|ENSG00000136861|chr9:120409227-120409240|TCACGCTGGCATAC/-|frameshift_variant;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8100768923759	2	502.810585	1003.60662	2.0655	0.0010386	-2.2764	-0.0011446	-0.21085	-0.00010602	502.8095495890564	59.787	0.30635	59.787	59.638	59.944	0					22	13	2	0	0	0	0.37791	1	24891	24891		58.679	0	1	4226300			14720	143	6868	6898	17407	17407					0.10495807862355377
KLEKLTKI	8	Unmodified	_KLEKLTKI_					0	0	0			REV__PER2|p.F222Lfs*70|1|0.14|ENSG00000132326|chr2:238271418-238271418|G/-|frameshift_variant	REV__PER2|p.F222Lfs*70|1|0.14|ENSG00000132326|chr2:238271418-238271418|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.8270751833916	2	486.826235	971.637917	3.4897	0.0016989	-1.1931	-0.00058083	2.2966	0.001118	486.8255223011467	106.12	0.20422	106.18	106.08	106.29	0.05455					25	9	4	0	0	0	0.89051	1	45142	45142		2.3027	0	1	188210000	+		14721	9845	6869	6899	17408	17408					0.15096380896443407
KLEKLTKI	8	Unmodified	_KLEKLTKI_					0	0	0			REV__PER2|p.F222Lfs*70|1|0.14|ENSG00000132326|chr2:238271418-238271418|G/-|frameshift_variant	REV__PER2|p.F222Lfs*70|1|0.14|ENSG00000132326|chr2:238271418-238271418|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8269225955009	2	486.826235	971.637917	3.2282	0.0015716	-0.96532	-0.00046994	2.2629	0.0011016	486.82571924988457	106.1	0.29006	106.26	106.16	106.45	0.15781					48	15	4	0	0	0	0.89051	1	45342	45342		2.3027	0	1	966120000	+		14722	9845	6869	6899	17409	17409					0.15096380896443407
KLEKVALGPPL	11	Unmodified	_KLEKVALGPPL_					0	0	0			REV__ENST00000422418.1_1_2:78020120-78020153:+|nuORF	REV__ENST00000422418.1_1_2:78020120-78020153:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1279785037041	3	388.916541	1163.72779	0.63538	0.00024711	0.24055	9.3553E-05	0.87593	0.00034066	388.9156811523051	88.396	0.39455	88.396	88.243	88.637	0					18	12	2	0	0	0	0.14606	1	37045	37045		1.2148	0.588	1	374340	+		14723	11074	6870	6900	17410	17410					0.15248010505024467
KLELAKNPLSV	11	Unmodified	_KLELAKNPLSV_					0	0	0			REV__ENST00000580206.1_1_18:14797682-14816454:+|nuORF	REV__ENST00000580206.1_1_18:14797682-14816454:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3720580935478	2	606.371538	1210.72852	2.4698	0.0014976	-2.4644	-0.0014943	0.005446	3.3023E-06	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	1.0174	1	32142	32142		2.7352	0	1	6795700	+		14724	11304	6871	6901	17411	17411					0.13158805154057518
KLELFKFWK	9	Unmodified	_KLELFKFWK_					0	0	0		ENST00000439964.1_1_2:64871847-64873778:+|nuORF	ENST00000439964.1_1_2:64871847-64873778:+|nuORF	ENST00000439964.1_1_2:64871847-64873778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8702880740166	2	619.868434	1237.72232	2.0915	0.0012964	1.33	0.00082441	3.4214	0.0021208	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.82114	1	33052	33052		1.8442	0	1	9211600			14725	6552	6872	6902	17412	17412					0.11296331713219843
KLEPDILLRA	10	Unmodified	_KLEPDILLRA_					0	0	0		ENST00000486282.6_1_1:110163774-110168851:+|nuORF;ENST00000526301.5_1_1:110162158-110172443:+|nuORF;nc|ENSG00000116337|Q01433-5|AMPD2;nc|ENSG00000116337|Q01433-2|AMPD2;nc|ENSG00000116337|Q01433-4|AMPD2;ENSG00000116337|ENST00000528667|AMPD2	ENST00000486282.6_1_1:110163774-110168851:+|nuORF	ENST00000486282.6_1_1:110163774-110168851:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3575927615166	2	584.358431	1166.70231	2.8591	0.0016707	-3.3279	-0.0019447	-0.46876	-0.00027393	584.3564830012283	74.225	0.87592	76.021	75.869	76.745	1.7962					48	27	3	0	0	0	0.89803	1	31144	31144		1.3295	0.13619	1	1865600			14726	1966	6873	6903	17413	17413					0.1256253598260173
KLEPFKKRLVI	11	Unmodified	_KLEPFKKRLVI_					0	0	0			REV__tr|A0A553SQZ8|A0A553SQZ8_NIACIAminoacidpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00040PE=4SV=1	REV__tr|A0A553SQZ8|A0A553SQZ8_NIACIAminoacidpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00040PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	456.9667846560478	3	457.634257	1369.88094	3.3601	0.0015377	-0.9022	-0.00041288	2.4579	0.0011248	457.6338083677799	105.85	0.115	106.01	105.94	106.06	0.15859					9	5	2	0	0	0	0.14606	1	45169	45169		0.40827	0	1	16233000	+		14727	15140	6874	6904	17414	17414					0.21079625621496234
KLEPPPVKQA	10	Unmodified	_KLEPPPVKQA_					0	0	0		nc|ENSG00000137936|O75815-2|BCAR3;nc|ENSG00000137936|O75815-3|BCAR3;ENSG00000137936|ENST00000260502|BCAR3	nc|ENSG00000137936|O75815-2|BCAR3	nc|ENSG00000137936|O75815-2|BCAR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8316528201103	2	553.832049	1105.64954	1.2808	0.00070934	-3.4528	-0.0019123	-2.172	-0.0012029	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.89803	1	29260	29260		1.1933	0.59184	1	2160700			14728	2800	6875	6905	17415	17415					0.10094577919812764
KLEQADHK	8	Unmodified	_KLEQADHK_					0	0	0		ENST00000535668.1_1_12:7288914-7291349:+|nuORF	ENST00000535668.1_1_12:7288914-7291349:+|nuORF	ENST00000535668.1_1_12:7288914-7291349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5087768435478	3	323.510174	967.508694	-3.3176	-0.0010733	-0.83338	-0.00026961	-4.151	-0.0013429	323.50988551281057	13.622	0.43115	13.622	13.331	13.762	0					27	13	3	0	0	0	0.88351	1	5616	5616		6.7232	0	1	1921700			14729	7200	6876	6906	17416	17416					0.023639992663675002
KLEQFVANK	9	Unmodified	_KLEQFVANK_					0	0	0			REV__AMIGO2|p.N439Kfs*24|1|0.45|ENSG00000139211|chr12:47077686-47077687|-/AAGTCTATTTTTAAAGGACACTAATACATAAAGT|frameshift_variant	REV__AMIGO2|p.N439Kfs*24|1|0.45|ENSG00000139211|chr12:47077686-47077687|-/AAGTCTATTTTTAAAGGACACTAATACATAAAGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8082763552666	2	538.808574	1075.60259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.363	1	71.687	71.187	72.187	0.32359								0	0	0	0.10913	1	29866	29866		32.786	5.1569	1		+		14730	8124	6877	6907	17417	17417					0.06781718368642942
KLEQHIRRRLI	11	Unmodified	_KLEQHIRRRLI_					0	0	0		ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	ENSG00000214929|ENST00000344803|SPATA31D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	731.4604980349541	2	731.459876	1460.9052	2.6959	0.0019719	-1.6502	-0.001207	1.0458	0.00076492	731.4589292253016	97.637	0.15793	97.728	97.62	97.778	0.090881					10	4	3	0	0	0	1.0391	1	40846	40846		1.1933	0	1	6308000			14731	5250	6878	6908	17418	17418					0.19318278827745416
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3826171755791	2	599.380563	1196.74657	2.5993	0.001558	-2.1117	-0.0012657	0.48763	0.00029227	599.3792419137711	90.455	0.55378	90.455	90.193	90.746	0					64	17	5	0	0	0	0.83753	2	37739	37739;37834		1.8442	0	1	37409000	+		14732	8603	6879	6909	17419;17420	17419					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.9227783083916	3	399.922801	1196.74657	0.7157	0.00028623	-0.039625	-1.5847E-05	0.67608	0.00027038	399.92276638935374	90.453	0.48957	90.453	90.193	90.682	0					62	15	5	0	0	0	0.79362	1	37836	37836		2.086	1.0724	1	18960000	+		14733	8603	6879	6909	17421	17421					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3812133669853	2	599.380563	1196.74657	2.5268	0.0015145	-1.8955	-0.0011361	0.6313	0.00037839	599.3793629300172	90.363	0.62398	90.572	90.242	90.866	0.20904					68	19	5	0	0	0	0.83753	3	37815	37815;37866;37918		1.8442	0	1	45564000	+		14734	8603	6879	6909	17422;17423;17424	17422					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.9229614138603	3	399.922801	1196.74657	2.7255	0.00109	-2.0414	-0.0008164	0.68415	0.00027361	399.9219825953898	90.344	0.46468	90.553	90.275	90.74	0.20903					61	14	5	0	0	0	0.83753	1	37892	37892		2.4985	1.5362	1	20735000	+		14735	8603	6879	6909	17425	17425					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3820678591728	2	599.380563	1196.74657	5.1329	0.0030766	-1.6636	-0.00099714	3.4693	0.0020794	599.3795541084771	89.672	0.56176	90.692	90.397	90.958	1.0199					55	17	4	0	0	0	0.83753	3	37718	37718;37765;37807		1.8442	0	1	21372000	+		14736	8603	6879	6909	17426;17427;17428	17426					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.9239990115166	3	399.922801	1196.74657	4.6415	0.0018562	-1.7091	-0.00068351	2.9324	0.0011727	399.92208603647134	89.662	0.4977	90.682	90.397	90.894	1.0199					48	15	4	0	0	0	0.79362	1	37792	37792		2.086	0	1	9097100	+		14737	8603	6879	6909	17429	17429					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3830444216728	2	599.380563	1196.74657	4.6782	0.002804	-1.837	-0.0011011	2.8412	0.0017029	599.3794515251226	89.378	0.59403	90.782	90.456	91.05	1.4045					60	18	4	0	0	0	0.83753	1	37565	37565		1.8442	0	1	13994000	+		14738	8603	6879	6909	17430	17430					0.15606984919440947
KLERIQRRV	9	Unmodified	_KLERIQRRV_					0	0	0			REV__nc|ENSG00000044459|Q9NXG0|CNTLN	REV__nc|ENSG00000044459|Q9NXG0|CNTLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.9235717654228	3	399.922801	1196.74657	4.485	0.0017936	-2.0391	-0.0008155	2.4458	0.00097815	399.9220334010135	89.353	0.56226	90.757	90.456	91.019	1.4045					49	17	4	0	0	0	0.79362	1	37647	37647		2.086	0.63089	1	6213100	+		14739	8603	6879	6909	17431	17431					0.15606984919440947
KLFAPAAR	8	Unmodified	_KLFAPAAR_					0	0	0			REV__nc|ENSG00000134769|Q9Y4J8-4|DTNA	REV__nc|ENSG00000134769|Q9Y4J8-4|DTNA	MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2687255740166	2	437.268887	872.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.127	1	36.402	35.902	36.902	1.2746								0	0	0	1.0178	1	14744	14744		2.0598	0	1		+		14740	9917	6880	6910	17432	17432					0.08186116205160943
KLFDIFSQQV	10	Unmodified	_KLFDIFSQQV_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8373290896416	2	612.834788	1223.65502	1.7275	0.0010587	1.9258	0.0011802	3.6534	0.0022389	612.8356311944432	67.583	0.34061	68.961	68.724	69.065	1.3778					23	10	3	0	0	0	0.16394	1	28363	28363		53.404	22.136	1	1992600			14741	843	6881	6911	17433	17433					0.0521425671158795
KLFDIFSQQV	10	Unmodified	_KLFDIFSQQV_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8375732302666	2	612.834788	1223.65502	1.1956	0.00073268	2.5032	0.001534	3.6987	0.0022667	612.836528802329	67.019	0.31191	68.908	68.797	69.109	1.8889					16	9	2	0	0	0	0.11632	1	28127	28127		61.09	33.461	1	1897900			14742	843	6881	6911	17434	17434					0.0521425671158795
KLFDIFSQQV	10	Unmodified	_KLFDIFSQQV_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	612.834788	1223.65502	1.9201	0.0011767	-0.56352	-0.00034534	1.3566	0.00083138	612.8343567634887	69.239	0.2492	69.239	69.109	69.358	0	0.21191	-0.0023955	NaN	61.09	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	460200			14743	843	6881	6911							0.0521425671158795
KLFDIFSQQV	10	Unmodified	_KLFDIFSQQV_					0	0	0		ENST00000568642.5_1_16:46706372-46712929:-|nuORF;ENSG00000069329|ENST00000299138|VPS35;ENST00000568784.6_1_16:46694386-46722246:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	ENST00000568642.5_1_16:46706372-46712929:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	612.834788	1223.65502	1.4025	0.00085949	0.33033	0.00020244	1.7328	0.0010619	612.834902154359	68.679	0.21992	69.001	68.905	69.125	0.32223	-0.02634	-0.0012999	NaN	61.09	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415690			14744	843	6881	6911							0.0521425671158795
KLFEEIREI	9	Unmodified	_KLFEEIREI_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8364135622978	2	588.834788	1175.65502	1.8873	0.0011113	-0.37528	-0.00022098	1.512	0.00089033	588.8350880946747	40.077	0.34361	41.94	41.707	42.051	1.8624					16	10	2	0	0	0	0.35546	1	16777	16777		22.658	3.2191	1	765330			14745	3878	6882	6912	17435	17435					0.07422256711629416
KLFEEIREILL	11	Unmodified	_KLFEEIREILL_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2831909060478	3	468.28166	1401.82315	3.6739	0.0017204	-0.39597	-0.00018542	3.2779	0.001535	468.28133981268934	73.44	1.4543	74.758	74.494	75.948	1.318					104	46	3	0	0	0	0.83687	1	30821	30821		7.846	1.9779	1	1785000			14746	3878	6883	6913	17436	17436					0.13831318905431544
KLFEEIREILL	11	Unmodified	_KLFEEIREILL_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2823058962822	3	468.28166	1401.82315	2.9998	0.0014048	-0.38012	-0.000178	2.6197	0.0012268	468.2811908167424	72.876	1.4671	74.687	74.385	75.852	1.8101					118	46	4	0	0	0	0.83687	1	30542	30542		11.065	5.542	1	2478900			14747	3878	6883	6913	17437	17437					0.13831318905431544
KLFEEIREILL	11	Unmodified	_KLFEEIREILL_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	702.4192993044853	2	701.918852	1401.82315	1.9473	0.0013668	-0.55171	-0.00038726	1.3956	0.00097958	701.9180483394318	72.939	0.94286	74.75	74.48	75.423	1.8101					58	29	3	0	0	0	0.068137	3	30558	30558;30606;30767		62.78	32.144	1	1904300			14748	3878	6883	6913	17438;17439;17440	17438					0.13831318905431544
KLFEEIREILL	11	Unmodified	_KLFEEIREILL_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	701.918852	1401.82315	3.078	0.0021605	-0.76772	-0.00053888	2.3103	0.0016216	701.9180962167801	73.459	0.97254	74.777	74.558	75.53	1.318	0.013839	-0.00018017	NaN	62.78	39	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	990930			14749	3878	6883	6913							0.13831318905431544
KLFGMIITI	9	Oxidation (M)	_KLFGM(Oxidation (M))IITI_		KLFGM(1)IITI		KLFGM(65)IITI	0	0	1		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3155395388603	2	526.314646	1050.61474	1.8468	0.000972	-0.37678	-0.00019831	1.47	0.00077369	526.3146383135079	66.755	0.99336	66.755	66.448	67.441	0					79	31	4	0	0	0	0.057024	1	27907	27907		65.235	10.461	1	7609000			14750	733;793	6884	6914	17441	17441		8			0.09145618787465537
KLFGMIITI	9	Oxidation (M)	_KLFGM(Oxidation (M))IITI_		KLFGM(1)IITI		KLFGM(75)IITI	0	0	1		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3160888552666	2	526.314646	1050.61474	2.0971	0.0011038	0.22436	0.00011808	2.3215	0.0012218	526.3149022724378	66.186	0.82374	66.511	66.272	67.096	0.32449					70	25	4	0	0	0	0.04145	1	27712	27712		74.929	8.4723	1	6361300			14751	733;793	6884	6914	17442	17442		8			0.09145618787465537
KLFGMIITI	9	Oxidation (M)	_KLFGM(Oxidation (M))IITI_		KLFGM(1)IITI		KLFGM(82)IITI	0	0	1		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3162719607353	2	526.314646	1050.61474	3.1024	0.0016328	-0.30137	-0.00015862	2.801	0.0014742	526.3144484740283	64.94	1.0252	66.339	66.039	67.064	1.3989					84	32	4	0	0	0	0.033504	2	27222	27222;27302		81.89	9.0445	1	10261000			14752	733;793	6884	6914	17443;17444	17443		8			0.09145618787465537
KLFGMIITI	9	Oxidation (M)	_KLFGM(Oxidation (M))IITI_		KLFGM(1)IITI		KLFGM(72)IITI	0	0	1		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3160278201103	2	526.314646	1050.61474	2.3056	0.0012135	0.40113	0.00021112	2.7068	0.0014246	526.3148472502598	64.351	0.91204	66.279	66.045	66.957	1.928					80	28	4	0	0	0	0.044893	2	27039	27000;27039		71.922	17.149	1	11229000			14753	733;793	6884	6914	17445;17446	17446		8			0.09145618787465537
KLFGMIITI	9	Unmodified	_KLFGMIITI_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.3191406130791	2	518.317189	1034.61982	1.9949	0.001034	1.2332	0.00063917	3.2281	0.0016732	518.3178068110755	79.501	0.8958	79.501	79.206	80.102	0					81	28	4	0	0	0	0.12251	1	33172	33172		41.84	3.8656	1	11571000			14754	733;793	6884	6915	17447	17447					0.10389922650097105
KLFGMIITI	9	Unmodified	_KLFGMIITI_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	518.3175536990166	2	518.317189	1034.61982	1.8468	0.00095721	0.11184	5.7966E-05	1.9586	0.0010152	518.3170602366773	78.785	0.86269	79.095	78.832	79.695	0.30933					65	27	3	0	0	0	0.037761	1	32954	32954		78.149	3.7266	1	14528000			14755	733;793	6884	6915	17448	17448					0.10389922650097105
KLFGMIITI	9	Unmodified	_KLFGMIITI_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3185912966728	2	518.317189	1034.61982	2.6638	0.0013807	0.65477	0.00033938	3.3185	0.0017201	518.3176131956362	77.749	1.5071	79.03	78.791	80.299	1.2809					89	48	2	0	0	0	0.026836	3	32617	32581;32617;32656		92.491	17.562	1	56267000			14756	733;793	6884	6915	17449;17450;17451	17450					0.10389922650097105
KLFGMIITI	9	Unmodified	_KLFGMIITI_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12184516-12209761:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3181030154228	2	518.317189	1034.61982	1.4452	0.00074905	0.85366	0.00044247	2.2988	0.0011915	518.3177772481836	77.211	1.1241	78.962	78.592	79.716	1.7514					111	35	5	0	0	0	0.031377	4	32407	32331;32368;32407;32486		85.272	14.821	1	46860000			14757	733;793	6884	6915	17452;17453;17454;17455	17454					0.10389922650097105
KLFHGEIWPA	10	Unmodified	_KLFHGEIWPA_					0	0	0		ENST00000447578.6_1_12:110930933-110930975:-|nuORF	ENST00000447578.6_1_12:110930933-110930975:-|nuORF	ENST00000447578.6_1_12:110930933-110930975:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.8859130740166	3	399.885353	1196.63423	1.8748	0.0007497	-0.22832	-9.1301E-05	1.6465	0.0006584	399.8852218570621	40.327	0.3981	41.637	41.389	41.788	1.3102					26	12	3	0	0	0	0.78179	1	16902	16902		14.218	2.0434	1	1342200			14758	6588	6885	6916	17456	17456					0.0437771112262908
KLFHGEIWPA	10	Unmodified	_KLFHGEIWPA_					0	0	0		ENST00000447578.6_1_12:110930933-110930975:-|nuORF	ENST00000447578.6_1_12:110930933-110930975:-|nuORF	ENST00000447578.6_1_12:110930933-110930975:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.8860351443291	3	399.885353	1196.63423	1.6883	0.00067512	0.023886	9.5516E-06	1.7122	0.00068467	399.8853235769818	39.875	0.40315	41.737	41.552	41.956	1.8624					28	12	3	0	0	0	0.69361	1	16718	16718		18.721	2.1553	1	2340700			14759	6588	6885	6916	17457	17457					0.0437771112262908
KLFIGGLNV	9	Unmodified	_KLFIGGLNV_					0	0	0		ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7986938357353	2	480.797478	959.580402	2.2167	0.0010658	0.90586	0.00043553	3.1226	0.0015013	480.79776008402615	58.841	0.34863	58.841	58.656	59.005	0					26	10	3	0	0	0	0.049839	1	24552	24552		68.081	11.539	1	2552100			14760	4463	6886	6917	17458	17458					0.09899538690910958
KLFIGGLNV	9	Unmodified	_KLFIGGLNV_					0	0	0		ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.7982360720634	2	480.797478	959.580402	3.2433	0.0015594	-0.97405	-0.00046832	2.2692	0.001091	480.7967697775188	58.273	0.31581	58.596	58.428	58.744	0.32298					21	9	3	0	0	0	0.11643	1	24458	24458		43.858	5.7071	1	2942600			14761	4463	6886	6917	17459	17459					0.09899538690910958
KLFIGGLNV	9	Unmodified	_KLFIGGLNV_					0	0	0		ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	ENSG00000177733|ENST00000314940|HNRNPA0	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7979614138603	2	480.797478	959.580402	1.683	0.0008092	-0.88535	-0.00042568	0.79768	0.00038352	480.79703632519767	57.059	0.36025	58.474	58.276	58.637	1.4145					27	11	3	0	0	0	0.098163	2	23888	23888;23930		49.933	13.889	1	13305000			14762	4463	6886	6917	17460;17461	17460					0.09899538690910958
KLFNEFIQL	9	Unmodified	_KLFNEFIQL_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3269531130791	2	576.326599	1150.63865	1.129	0.00065066	-0.97192	-0.00056014	0.15706	9.052E-05	576.326172163436	70.126	0.39834	70.448	70.192	70.591	0.32223					32	12	3	0	0	0	0.044893	2	29345	29297;29345		71.922	9.3496	1	3234000			14763	782	6887	6918	17462;17463	17463					0.06935175545504535
KLFNEFIQL	9	Unmodified	_KLFNEFIQL_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3292724490166	2	576.326599	1150.63865	1.9295	0.001112	2.8491	0.001642	4.7786	0.002754	576.3288404985667	68.968	0.53004	70.334	70.028	70.558	1.3657					46	16	4	0	0	0	0.01454	2	28953	28904;28953		103.75	38.513	1	10595000			14764	782	6887	6918	17464;17465	17465					0.06935175545504535
KLFNEFIQL	9	Unmodified	_KLFNEFIQL_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3288452029228	2	576.326599	1150.63865	1.9958	0.0011502	2.6029	0.0015001	4.5987	0.0026503	576.3284786834516	68.316	0.47665	70.186	69.979	70.456	1.87					42	14	4	0	0	0	0.010279	3	28690	28644;28690;28733		107.19	28.459	1	9305300			14765	782	6887	6918	17466;17467;17468	17467					0.06935175545504535
KLFNEFIQL	9	Unmodified	_KLFNEFIQL_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	576.326599	1150.63865	1.497	0.00086276	-0.47191	-0.00027197	1.0251	0.00059079	576.3261019065343	70.72	0.37012	70.72	70.537	70.907	0	0.29774	-0.0017894	NaN	107.19	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2284500			14766	782	6887	6918							0.06935175545504535
KLFRKRFKP	9	Unmodified	_KLFRKRFKP_					0	0	0			REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.3930541872978	2	610.392942	1218.77133	3.0645	0.0018706	-3.27	-0.001996	-0.20552	-0.00012544	610.3909342029874	105.93	0.16146	106.09	106	106.16	0.15859					27	7	5	0	0	0	0.85019	1	45215	45215		0.52476	0	1	474860000	+		14767	12768	6888	6919	17469	17469					0.1706966479282528
KLFRKRFKP	9	Unmodified	_KLFRKRFKP_					0	0	0			REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	610.392942	1218.77133	1.5577	0.00095079	-1.4831	-0.00090526	0.074595	4.5532E-05	610.3921563543018	105.99	0.13783	105.99	105.91	106.05	0	-0.048607	0.0014412	NaN	0.52476	20	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	130840000	+		14768	12768	6888	6919							0.1706966479282528
KLFRKRFKP	9	Unmodified	_KLFRKRFKP_					0	0	0			REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	610.392942	1218.77133	2.6477	0.0016161	-1.7992	-0.0010982	0.8485	0.00051792	610.3921239281657	105.95	0.14117	106.01	105.92	106.06	0.05455	-0.034584	0.0010553	NaN	0.52476	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115530000	+		14769	12768	6888	6919							0.1706966479282528
KLFRKRFKP	9	Unmodified	_KLFRKRFKP_					0	0	0			REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	610.392942	1218.77133	3.0645	0.0018706	-3.27	-0.001996	-0.20552	-0.00012544	610.3909342029874	105.93	0.16146	106.09	106	106.16	0.15859	0.04374	-0.00074024	NaN	0.52476	27	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	474860000	+		14770	12768	6888	6919							0.1706966479282528
KLFRKRFKP	9	Unmodified	_KLFRKRFKP_					0	0	0			REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	REV__ENST00000381086.9_1_7:45953275-45953332:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	610.392942	1218.77133	3.207	0.0019576	-3.7001	-0.0022585	-0.49302	-0.00030094	610.3907178277323	105.92	0.16025	106.08	105.97	106.13	0.16679	0.039451	-0.0012652	NaN	0.52476	28	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477750000	+		14771	12768	6888	6919							0.1706966479282528
KLFSILSTV	9	Unmodified	_KLFSILSTV_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-3|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.3112060427666	2	504.310418	1006.60628	1.7986	0.00090707	0.47021	0.00023713	2.2688	0.0011442	504.31053934331914	66.528	0.38474	66.528	66.318	66.703	0					24	11	3	0	0	0	0.043696	3	27714	27665;27714;27762		72.968	16.791	1	1655900			14772	3799	6889	6920	17470;17471;17472	17471					0.10324388142521457
KLFSILSTV	9	Unmodified	_KLFSILSTV_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-3|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.3119689822197	2	504.310418	1006.60628	2.3522	0.0011862	0.93323	0.00047064	3.2854	0.0016569	504.311088953108	65.974	0.34909	66.299	66.083	66.432	0.32449					23	10	3	0	0	0	0.060242	2	27622	27577;27622		63.961	3.8227	1	1568400			14773	3799	6889	6920	17473;17474	17474					0.10324388142521457
KLFSILSTV	9	Unmodified	_KLFSILSTV_					0	0	0		nc|ENSG00000164818|Q86Y56-2|DNAAF5;ENSG00000164818|ENST00000297440|DNAAF5;ENST00000491496.1_1_7:803580-810256:+|nuORF;nc|ENSG00000164818|Q86Y56-3|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	nc|ENSG00000164818|Q86Y56-2|DNAAF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3125793337822	2	504.310418	1006.60628	3.3279	0.0016783	4.3381	0.0021878	7.6661	0.0038661	504.3129000783489	64.656	0.46063	66.063	65.833	66.293	1.4071					32	14	3	0	0	0	0.015029	1	27084	27084		103.35	24.625	1	4555200			14774	3799	6889	6920	17475	17475					0.10324388142521457
KLFVKKKKK	9	Unmodified	_KLFVKKKKK_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.9091064333916	2	573.907894	1145.80123	1.059	0.00060776	-1.1135	-0.00063906	-0.054549	-3.1306E-05	573.9074168714947	104.8	0.85822	104.8	104.33	105.19	0					109	44	3	0	0	0	0.85403	4	44293	44293;44370;44449;44529		0	0	1	57375000	+		14775	8295	6890	6921	17476;17477;17478;17479	17476					0.2341660373817831
KLFVKKKKK	9	Unmodified	_KLFVKKKKK_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.9086181521416	2	573.907894	1145.80123	1.0605	0.00060862	-0.94771	-0.0005439	0.11277	6.4722E-05	573.9076560210951	105.38	0.31053	105.38	105.17	105.48	0					45	15	4	0	0	0	0.85403	2	44671	44671;44747		0	0	1	60082000	+		14776	8295	6890	6921	17480;17481	17480					0.2341660373817831
KLFVKKKKK	9	Unmodified	_KLFVKKKKK_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.9096557497978	2	573.907894	1145.80123	1.0597	0.00060815	-0.46055	-0.00026431	0.59912	0.00034384	573.907795988707	105.61	0.48952	105.61	105.48	105.97	0					66	24	3	0	0	0	0.85403	2	44867	44867;44959		0	0	1	33371000	+		14777	8295	6890	6921	17482;17483	17482					0.2341660373817831
KLFVKKKKK	9	Unmodified	_KLFVKKKKK_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.9095336794853	2	573.907894	1145.80123	1.0586	0.00060751	-1.6338	-0.00093765	-0.57525	-0.00033014	573.907811752804	106.56	0.7495	106.56	106.11	106.86	0					75	36	3	0	0	0	0.85403	1	45440	45440		0	0	1	19989000	+		14778	8295	6890	6921	17484	17484					0.2341660373817831
KLFVKKKKK	9	Unmodified	_KLFVKKKKK_					0	0	0			REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	REV__chr2:131082657-131088963|201|13.13|0.81|4.02|-|0|FAM168B,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	573.907894	1145.80123	1.0586	0.00060751	-1.6338	-0.00093765	-0.57525	-0.00033014	573.907811752804	106.56	0.7495	106.56	106.11	106.86	0	0	0	NaN	0	75	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19989000	+		14779	8295	6890	6921							0.2341660373817831
KLFWKKVVC	9	Unmodified	_KLFWKKVVC_					0	0	0		nc|ENSG00000064787|O75363-2|BCAS1	nc|ENSG00000064787|O75363-2|BCAS1	nc|ENSG00000064787|O75363-2|BCAS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8447753787041	2	575.843905	1149.67326	1.705	0.00098179	-1.0248	-0.00059011	0.68018	0.00039168	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.83753	1	31900	31900		1.8442	0	1	3135100			14780	7829	6891	6922	17485	17485					0.10440720152632821
KLFWLSLHTRG	11	Unmodified	_KLFWLSLHTRG_					0	0	0			REV__ENST00000370050.9_1_6:75982451-75982613:-|nuORF	REV__ENST00000370050.9_1_6:75982451-75982613:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	679.3883544802666	2	679.390596	1356.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.66	1	117.81	117.31	118.31	0.15606								0	0	0	0.63775	1	50814	50814		2.4985	1.0166	1		+		14781	12654	6892	6923	17486	17486					0.10252735859398854
KLGDFGLATV	10	Unmodified	_KLGDFGLATV_					0	0	0		nc|ENSG00000170390|Q8N568-2|DCLK2;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7908508181572	2	510.78985	1019.56515	2.2047	0.0011261	0.36	0.00018388	2.5647	0.00131	510.79007059406166	51.99	0.37125	51.99	51.789	52.161	0					25	11	3	0	0	0	0.21129	1	21665	21665		47.594	0	1	1703600			14782	4143	6893	6924	17487	17487					0.05614627103057046
KLGDFGLATV	10	Unmodified	_KLGDFGLATV_					0	0	0		nc|ENSG00000170390|Q8N568-2|DCLK2;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.7910034060478	2	510.78985	1019.56515	1.8647	0.00095246	1.2457	0.00063627	3.1104	0.0015887	510.7903672579509	51.505	0.31118	51.831	51.663	51.975	0.32553					21	9	3	0	0	0	0.50772	1	21549	21549		27.223	0	1	2340100			14783	4143	6893	6924	17488	17488					0.05614627103057046
KLGDFGLATV	10	Unmodified	_KLGDFGLATV_					0	0	0		nc|ENSG00000170390|Q8N568-2|DCLK2;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7910644412041	2	510.78985	1019.56515	3.0554	0.0015607	-0.14287	-7.2974E-05	2.9126	0.0014877	510.7896700206464	50.269	0.40971	51.66	51.419	51.829	1.3911					34	12	4	0	0	0	0.12602	2	21058	21009;21058		59.368	0	1	8302700			14784	4143	6893	6924	17489;17490	17490					0.05614627103057046
KLGDFGLATV	10	Unmodified	_KLGDFGLATV_					0	0	0		nc|ENSG00000170390|Q8N568-2|DCLK2;ENSG00000170390|ENST00000296550|DCLK2;nc|ENSG00000170390|Q8N568-3|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	nc|ENSG00000170390|Q8N568-2|DCLK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7908813357353	2	510.78985	1019.56515	2.0118	0.0010276	0.40379	0.00020625	2.4156	0.0012339	510.789893604031	49.704	0.47076	51.681	51.412	51.883	1.9772					34	14	3	0	0	0	0.054878	2	20835	20786;20835		76.825	0	1	6710600			14785	4143	6893	6924	17491;17492	17492					0.05614627103057046
KLGDFPYVSI	10	Unmodified	_KLGDFPYVSI_					0	0	0		ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8117553591728	2	569.810782	1137.60701	2.4478	0.0013948	4.2814	0.0024396	6.7292	0.0038344	569.8109179215758	65.737	0.63876	67.136	66.849	67.488	1.3989					46	20	5	0	0	0	0.078293	1	27541	27541		67.838	6.4807	1	4720300			14786	3739	6894	6925	17493	17493					0.04371182791555839
KLGEIVTTI	9	Unmodified	_KLGEIVTTI_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000483848.5_1_3:57563094-57582900:-|nuORF;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.3013793826103	2	487.30005	972.585547	1.7713	0.00086316	1.3059	0.00063638	3.0772	0.0014995	487.3006503313493	43.353	0.43825	43.353	43.149	43.587	0					41	13	4	0	0	0	0.040497	2	18188	18150;18188		75.761	3.863	1	11133000			14787	467;4031	6895	6926	17494;17495	17495					0.09815797762848888
KLGEIVTTI	9	Unmodified	_KLGEIVTTI_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000483848.5_1_3:57563094-57582900:-|nuORF;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.3007690310478	2	487.30005	972.585547	2.5172	0.0012266	-0.50822	-0.00024766	2.0089	0.00097895	487.29977107934457	42.847	0.43792	43.168	42.943	43.381	0.32058					40	14	4	0	0	0	0.033102	1	17986	17986		82.529	13.424	1	14480000			14788	467;4031	6895	6926	17496	17496					0.09815797762848888
KLGEIVTTI	9	Unmodified	_KLGEIVTTI_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000483848.5_1_3:57563094-57582900:-|nuORF;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3012267947197	2	487.30005	972.585547	2.3901	0.0011647	0.15244	7.4282E-05	2.5425	0.001239	487.3001176625563	41.243	0.50644	42.569	42.305	42.811	1.3254					53	15	5	0	0	0	0.024001	4	17349	17228;17271;17310;17349		96.111	21.182	1	45760000			14789	467;4031	6895	6926	17497;17498;17499;17500	17500					0.09815797762848888
KLGEIVTTI	9	Unmodified	_KLGEIVTTI_					0	0	0		ENSG00000004059|ENST00000000233|ARF5;ENST00000483848.5_1_3:57563094-57582900:-|nuORF;ENST00000493378.1_1_3:57569737-57582900:-|nuORF;ENST00000463733.5_1_7:127228552-127229672:+|nuORF;ENST00000397387.2_1_13:101408869-101409262:-|nuORF;ENST00000470670.5_1_1:228270461-228285316:+|nuORF;nc|ENSG00000134287|P61204-2|ARF3;ENST00000605447.1_1_9:136944076-136944538:+|nuORF;ENSG00000143761|ENST00000272102|ARF1;ENSG00000134287|ENST00000256682|ARF3;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5;ENSG00000168374|ENST00000303436|ARF4	ENSG00000004059|ENST00000000233|ARF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.3011047244072	2	487.30005	972.585547	2.0816	0.0010144	-0.15144	-7.3796E-05	1.9302	0.00094059	487.2999699270068	40.796	0.44362	42.689	42.452	42.896	1.8927					47	13	5	0	0	0	0.0058174	3	17127	17047;17088;17127		118.89	33.623	1	45773000			14790	467;4031	6895	6926	17501;17502;17503	17503					0.09815797762848888
KLGSVPVTV	9	Unmodified	_KLGSVPVTV_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2825805544853	2	450.28166	898.548768	1.8943	0.00085298	0.24489	0.00011027	2.1392	0.00096325	450.2816663452296	34.176	0.36196	34.473	34.268	34.63	0.29701					27	11	3	0	0	0	0.043696	1	14340	14340		72.968	11.61	1	2275400			14791	5052	6896	6927	17504	17504					0.09543545936946884
KLGSVPVTV	9	Unmodified	_KLGSVPVTV_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2819091677666	2	450.28166	898.548768	0.75167	0.00033846	-0.42222	-0.00019012	0.32945	0.00014834	450.2814157379942	32.975	0.3289	34.253	34.055	34.383	1.2782					33	12	4	0	0	0	0.033102	2	13833	13791;13833		82.529	21.172	1	9322700			14792	5052	6896	6927	17505;17506	17506					0.09543545936946884
KLGSVPVTV	9	Unmodified	_KLGSVPVTV_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2822143435478	2	450.28166	898.548768	1.0208	0.00045965	0.22265	0.00010026	1.2435	0.00055991	450.2817044414071	32.409	0.36229	34.234	34.033	34.395	1.8246					33	11	4	0	0	0	0.033102	2	13607	13563;13607		82.529	7.6003	1	11869000			14793	5052	6896	6927	17507;17508	17508					0.09543545936946884
KLGSVPVTV	9	Unmodified	_KLGSVPVTV_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	450.28166	898.548768	1.3635	0.00061398	0.27912	0.00012568	1.6427	0.00073966	450.28180297850577	34.659	0.34472	34.659	34.462	34.806	0	0.2542	0.00013654	NaN	82.529	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2302100			14794	5052	6896	6927							0.09543545936946884
KLHELKKDL	9	Unmodified	_KLHELKKDL_					0	0	0		ENSG00000152767|ENST00000319562|FARP1;nc|ENSG00000152767|Q9Y4F1-2|FARP1	ENSG00000152767|ENST00000319562|FARP1	ENSG00000152767|ENST00000319562|FARP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3466674685478	2	562.345323	1122.67609	2.6532	0.001492	-2.0858	-0.0011729	0.56738	0.00031906	562.3441525659362	72.688	1.1022	74.498	74.105	75.207	1.8101					54	34	2	0	0	0	0.70108	1	30441	30441		7.2892	1.0834	1	1629100			14795	3337	6897	6928	17509	17509					0.11966266811123205
KLHGKSSR	8	Unmodified	_KLHGKSSR_					0	0	0			REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K	REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.7732726931572	2	456.772326	911.530098	2.3782	0.0010863	0.17012	7.7705E-05	2.5483	0.001164	456.77228369656086	71.907	0.60027	72.232	71.882	72.483	0.32494					51	18	4	0	0	0	0.89051	1	30058	30058		2.3027	0	1	12516000	+		14796	14444	6898	6929	17510	17510					0.07079429085752054
KLHGKSSR	8	Unmodified	_KLHGKSSR_					0	0	0			REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K	REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7732421755791	2	456.772326	911.530098	1.4838	0.00067776	0.62292	0.00028453	2.1067	0.00096229	456.7724436163955	70.619	0.54469	72.457	72.198	72.742	1.8378					46	17	4	0	0	0	0.89051	1	29639	29639		2.3027	0	1	10109000	+		14797	14444	6898	6929	17511	17511					0.07079429085752054
KLHGLDLLL	9	Unmodified	_KLHGLDLLL_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-3|VPS13A;REV__VPS13A-SLC44A1|2|fusion	REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3282958865166	2	511.32386	1020.63317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.93	1	108.09	107.59	108.59	0.15781								0	0	0	0.42693	1	46559	46559		2.0598	0	1		+		14798	11696;15933	6899	6930	17512	17512					0.12367496753722662
KLHGVNINV	9	Unmodified	_KLHGVNINV_					0	0	0		nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.8669921755791	3	331.866181	992.576714	-0.0033632	-1.1161E-06	2.0819	0.0006909	2.0785	0.00068978	331.86683706904086	23.199	0.30589	24.414	24.29	24.596	1.2145					22	9	3	0	0	0	0.49082	2	9696	9696;9748		10.8	6.0836	1	1873800			14799	4307	6900	6931	17513;17514	17513					0.0801286891704649
KLHGVNINV	9	Unmodified	_KLHGVNINV_					0	0	0		nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.8671752810478	3	331.866181	992.576714	-0.026259	-8.7145E-06	2.5622	0.0008503	2.5359	0.00084159	331.86702663937666	22.802	0.37205	24.453	24.314	24.686	1.6511					24	11	3	0	0	0	0.37357	1	9509	9509		15.248	10.533	1	2262900			14800	4307	6900	6931	17515	17515					0.0801286891704649
KLHGVNINV	9	Unmodified	_KLHGVNINV_					0	0	0		nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2958251833916	2	497.295633	992.576714	0.44401	0.00022081	1.6267	0.00080893	2.0707	0.0010297	497.29636256563697	22.821	0.31041	24.472	24.314	24.624	1.6511					18	9	3	0	0	0	0.083604	1	9516	9516		54.774	18.729	1	826100			14801	4307	6900	6931	17516	17516					0.0801286891704649
KLHGVNINV	9	Unmodified	_KLHGVNINV_					0	0	0		nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	497.295633	992.576714	0.78319	0.00038948	0.42843	0.00021305	1.2116	0.00060253	497.2957190841203	24.802	0.27519	24.802	24.613	24.888	0	0.20169	-0.00027318	NaN	54.774	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323450			14802	4307	6900	6931							0.0801286891704649
KLHGVNINV	9	Unmodified	_KLHGVNINV_					0	0	0		nc|ENSG00000173933|Q9BWF3-3|RBM4;nc|ENSG00000173933|Q9BWF3-4|RBM4;nc|ENSG00000173933|Q9BWF3-2|RBM4;ENSG00000173914|ENST00000310046|RBM4B;ENSG00000173933|ENST00000310092|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	nc|ENSG00000173933|Q9BWF3-3|RBM4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	497.295633	992.576714	1.4483	0.00072025	0.58437	0.0002906	2.0327	0.0010108	497.29593456722927	24.427	0.26899	24.669	24.564	24.833	0.24251	0.069047	-0.00011808	NaN	54.774	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	547970			14803	4307	6900	6931							0.0801286891704649
KLHLIKRDI	9	Unmodified	_KLHLIKRDI_					0	0	0			REV__tr|A0A553SFA2|A0A553SFA2_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08315PE=4SV=1	REV__tr|A0A553SFA2|A0A553SFA2_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08315PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2492248415947	3	379.248514	1134.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.824	1	96.012	95.512	96.512	1.1887								0	0	0	0.42693	1	39893	39893		1.0715	0.3738	1		+		14804	14697	6901	6932	17517	17517					0.1617396580197692
KLHMVVAP	8	Unmodified	_KLHMVVAP_					0	0	0			REV__nc|ENSG00000163166|Q96ST2-2|IWS1	REV__nc|ENSG00000163166|Q96ST2-2|IWS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	447.7665588259697	2	447.765123	893.515694	2.8301	0.0012672	0.1618	7.2449E-05	2.9919	0.0013396	447.76505287916825	72.387	0.45779	73.717	73.455	73.913	1.3297					36	14	3	0	0	0	0.89008	1	30408	30408		2.5775	1.7838	1	7690600	+		14805	10675	6902	6933	17518	17518					0.06467640613243475
KLIDGQVIQL	10	Unmodified	_KLIDGQVIQL_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.8464233279228	2	563.845156	1125.67576	1.5603	0.00087975	4.4435	0.0025054	6.0038	0.0033852	563.8457514660818	52.754	0.31368	52.754	52.572	52.885	0					21	9	3	0	0	0	0.44808	1	21981	21981		41.956	9.1699	1	1138900			14806	3905	6903	6934	17519	17519					0.11794847091277916
KLIDGQVIQL	10	Unmodified	_KLIDGQVIQL_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.8472167849541	2	563.845156	1125.67576	1.6171	0.0009118	3.7517	0.0021154	5.3688	0.0030272	563.8459603354673	52.199	0.30881	52.524	52.343	52.652	0.32553					16	9	2	0	0	0	0.37042	2	21848	21848;21894		40.239	7.4535	1	1472100			14807	3905	6903	6934	17520;17521	17520					0.11794847091277916
KLIDGQVIQL	10	Unmodified	_KLIDGQVIQL_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3477661013603	2	563.845156	1125.67576	0.86502	0.00048773	3.6712	0.00207	4.5363	0.0025578	563.8454951169354	51.03	0.33179	52.424	52.226	52.558	1.3938					25	10	3	0	0	0	0.12803	1	21324	21324		67.838	5.2655	1	6175300			14808	3905	6903	6934	17522	17522					0.11794847091277916
KLIDGQVIQL	10	Unmodified	_KLIDGQVIQL_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8452026247978	2	563.845156	1125.67576	0.98628	0.00055611	2.0976	0.0011827	3.0839	0.0017389	563.844572592231	50.45	0.32756	52.425	52.248	52.575	1.9753					23	10	3	0	0	0	0.064932	1	21163	21163		74.2	1.2317	1	5177800			14809	3905	6903	6934	17523	17523					0.11794847091277916
KLIDKGIIH	9	Unmodified	_KLIDKGIIH_					0	0	0			REV__MARS2|p.I469Afs*37|1|0.05|ENSG00000247626|chr2:197706809-197706810|-/GCAACGTGGTGGATCCTAGGACTTGCCTT|frameshift_variant	REV__MARS2|p.I469Afs*37|1|0.05|ENSG00000247626|chr2:197706809-197706810|-/GCAACGTGGTGGATCCTAGGACTTGCCTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2223388552666	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.276	1	69.276	68.776	69.776	0								0	0	0	0.42693	1	28850	28850		1.0715	0	1		+		14810	11942	6904	6935	17524	17524					0.12766899127996112
KLIDLSQVMYL	11	Unmodified	_KLIDLSQVMYL_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.8753539919853	2	661.873056	1321.73156	2.6107	0.001728	-0.052184	-3.4539E-05	2.5585	0.0016934	661.8735002718151	79.204	0.34518	80.471	80.284	80.63	1.2668					24	10	3	0	0	0	0.034474	1	33248	33248		75.571	39.064	1	2160800			14811	4663	6905	6936	17525	17525					0.08356312216596962
KLIDLSQVMYL	11	Unmodified	_KLIDLSQVMYL_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	661.8748046755791	2	661.873056	1321.73156	2.0881	0.0013821	-0.12486	-8.2638E-05	1.9633	0.0012994	661.8735474947911	78.754	0.31044	80.489	80.319	80.63	1.735					28	9	4	0	0	0	0.027807	2	33049	33001;33049		83.429	29.527	1	2589000			14812	4663	6905	6936	17526;17527	17527					0.08356312216596962
KLIDLSQVMYL	11	Unmodified	_KLIDLSQVMYL_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	661.873056	1321.73156	2.1685	0.0014353	0.77505	0.00051298	2.9436	0.0019483	661.8737360129629	80.713	0.28099	80.713	80.572	80.853	0	0.16621	0.00080454	NaN	83.429	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	772160			14813	4663	6905	6936							0.08356312216596962
KLIDLSQVMYL	11	Unmodified	_KLIDLSQVMYL_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	661.873056	1321.73156	1.797	0.0011894	2.8123	0.0018614	4.6093	0.0030508	661.877083365705	80.213	0.31239	80.513	80.321	80.633	0.30046	-0.032947	0.0035013	NaN	83.429	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	683470			14814	4663	6905	6936							0.08356312216596962
KLIETTKKTRR	11	Unmodified	_KLIETTKKTRR_					0	0	0			REV__nc|ENSG00000173482|P28827|PTPRM	REV__nc|ENSG00000173482|P28827|PTPRM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.6272460818291	3	458.624421	1372.85143	4.0742	0.0018685	-2.0543	-0.00094214	2.0199	0.0009264	458.623439074535	96.431	0.21617	96.715	96.589	96.806	0.28442					19	6	4	0	0	0	1.0366	1	40566	40566		0.40827	0	1	11351000	+		14815	11100	6906	6937	17528	17528					0.1799206160533231
KLIHLLRPA	9	Unmodified	_KLIHLLRPA_					0	0	0		nc|ENSG00000163482|Q9NRP7-2|STK36;ENSG00000163482|ENST00000295709|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1060.696582019329	1	1060.69896	1059.69168	3.7713	0.0040002	-3.3135	-0.0035146	0.45781	0.0004856	1060.693701359516	106.05	0.14498	106.2	106.14	106.28	0.15781					18	7	3	0	0	0	0.85019	1	45313	45313		0.52476	0	1	66163000			14816	3687	6907	6938	17529	17529					0.16422598118833776
KLIKKYWRHKK	11	Unmodified	_KLIKKYWRHKK_					0	0	0			REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	510.3771240115166	3	509.992667	1526.95617	1.4579	0.00074349	-0.071811	-3.6623E-05	1.386	0.00070687	510.3266085436424	105.78	0.09536	105.78	105.74	105.84	0					12	4	3	0	0	0	0.14606	1	44968	44968		0	0	1	8935600	+		14817	10794	6908	6939	17530	17530					0.21377227872562798
KLIKKYWRHKK	11	Unmodified	_KLIKKYWRHKK_					0	0	0			REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	509.992667	1526.95617	2.9264	0.0014924	-0.8329	-0.00042477	2.0935	0.0010677	509.9923349828859	105.75	0.19224	105.81	105.65	105.84	0.05455	0.01062	-0.00069759	NaN	0	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8660700	+		14818	10794	6908	6939							0.21377227872562798
KLILDRLLSP	10	Unmodified	_KLILDRLLSP_					0	0	0			REV__ENST00000246024.6_1_20:7959389-7959524:-|nuORF	REV__ENST00000246024.6_1_20:7959389-7959524:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3782226443291	2	584.376623	1166.73869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.868	1	96.868	96.368	97.368	0								0	0	0	0.66176	1	40496	40496		1.4819	0	1		+		14819	12137	6909	6940	17531	17531					0.16199412879336705
KLILLITQV	9	Unmodified	_KLILLITQV_					0	0	0		ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.8580200076103	2	520.857535	1039.70052	1.767	0.00092038	0.34761	0.00018106	2.1147	0.0011014	520.8576147469474	68.168	0.40775	68.49	68.313	68.721	0.32268					28	12	3	0	0	0	0.11669	1	28552	28552		43.772	16.144	1	1708000			14820	3725	6910	6941	17532	17532					0.18225526964647543
KLILLITQV	9	Unmodified	_KLILLITQV_					0	0	0		ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.8586913943291	2	520.857535	1039.70052	1.9366	0.0010087	0.64708	0.00033704	2.5837	0.0013457	520.857693009721	66.874	0.49993	68.263	67.996	68.496	1.3888					38	15	3	0	0	0	0.04812	3	28069	28018;28069;28112		69.105	25.672	1	6311300			14821	3725	6910	6941	17533;17534;17535	17534					0.18225526964647543
KLILLITQV	9	Unmodified	_KLILLITQV_					0	0	0		ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	ENSG00000163811|ENST00000407426|WDR43	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.8585082888603	2	520.857535	1039.70052	1.6616	0.00086547	0.55799	0.00029063	2.2196	0.0011561	520.8576057620393	66.34	0.47336	68.229	67.994	68.467	1.8889					38	14	4	0	0	0	0.033102	2	27844	27798;27844		82.529	27.756	1	5969400			14822	3725	6910	6941	17536;17537	17537					0.18225526964647543
KLILLLKRRKQ	11	Unmodified	_KLILLLKRRKQ_					0	0	0			REV__ENST00000467796.5_1_22:51221718-51237143:+|nuORF	REV__ENST00000467796.5_1_22:51221718-51237143:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	470.3336974978447	3	470.332801	1407.97657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.13	1	94.275	93.775	94.775	0.14493								0	0	0	0.63775	1	39397	39397		0	0	1		+		14823	13251	6911	6942	17538	17538					0.288903985323941
KLILLLKRRKQ	11	Unmodified	_KLILLLKRRKQ_					0	0	0			REV__ENST00000467796.5_1_22:51221718-51237143:+|nuORF	REV__ENST00000467796.5_1_22:51221718-51237143:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	470.3349182009697	3	470.332801	1407.97657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.023	1	95.147	94.647	95.647	0.12331								0	0	0	0.63775	1	39764	39764		0	0	1		+		14824	13251	6911	6942	17539	17539					0.288903985323941
KLILLPILE	9	Unmodified	_KLILLPILE_					0	0	0			REV__ENST00000590156.5_1_18:43671730-43674948:-|nuORF	REV__ENST00000590156.5_1_18:43671730-43674948:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3614379763603	2	526.359911	1050.70527	0.40819	0.00021486	2.7741	0.0014602	3.1822	0.001675	526.361331174261	18.028	0.46588	19.476	19.292	19.758	1.448					36	15	3	0	0	0	0.8523	1	7546	7546		0.52476	0	1	11213000	+		14825	14063	6912	6943	17540	17540					0.18194411107424457
KLINKLLLKI	10	Unmodified	_KLINKLLLKI_					0	0	0		tr|A0A7D7A2Y2|A0A7D7A2Y2_9CLOTLowmolecularweightproteinargininephosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19550PE=3SV=1	tr|A0A7D7A2Y2|A0A7D7A2Y2_9CLOTLowmolecularweightproteinargininephosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19550PE=3SV=1	tr|A0A7D7A2Y2|A0A7D7A2Y2_9CLOTLowmolecularweightproteinargininephosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19550PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4299194216728	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.66	1	104.66	104.16	105.16	0								0	0	0	0.6624	1	44222	44222		0.40072	0.050084	1				14826	17268	6913	6944	17541	17541					0.253137397068258
KLIPQLPTL	9	Unmodified	_KLIPQLPTL_					0	0	0		ENSG00000116954|ENST00000373001|RRAGC;ENST00000496778.1_1_1:39317285-39318153:-|nuORF;nc|ENSG00000025039|Q9NQL2-2|RRAGD;ENSG00000025039|ENST00000369415|RRAGD	ENSG00000116954|ENST00000373001|RRAGC	ENSG00000116954|ENST00000373001|RRAGC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8354369997978	2	511.83406	1021.65357	3.2167	0.0016464	0.14721	7.5349E-05	3.3639	0.0017218	511.83403638521816	62.561	0.45162	63.974	63.679	64.131	1.4134					24	14	2	0	0	0	0.098163	1	26231	26231		49.933	25.912	1	1915500			14827	1992	6914	6945	17542	17542					0.14360667413507144
KLIPQLPTL	9	Unmodified	_KLIPQLPTL_					0	0	0		ENSG00000116954|ENST00000373001|RRAGC;ENST00000496778.1_1_1:39317285-39318153:-|nuORF;nc|ENSG00000025039|Q9NQL2-2|RRAGD;ENSG00000025039|ENST00000369415|RRAGD	ENSG00000116954|ENST00000373001|RRAGC	ENSG00000116954|ENST00000373001|RRAGC	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.83406	1021.65357	2.0579	0.0010533	1.0772	0.00055137	3.1351	0.0016047	511.83474838974564	63.802	0.12057	64.131	64.056	64.177	0.32899	0.12236	0.00090602	NaN	49.933	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195390			14828	1992	6914	6945							0.14360667413507144
KLIPQLPTL	9	Unmodified	_KLIPQLPTL_					0	0	0		ENSG00000116954|ENST00000373001|RRAGC;ENST00000496778.1_1_1:39317285-39318153:-|nuORF;nc|ENSG00000025039|Q9NQL2-2|RRAGD;ENSG00000025039|ENST00000369415|RRAGD	ENSG00000116954|ENST00000373001|RRAGC	ENSG00000116954|ENST00000373001|RRAGC	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	511.83406	1021.65357	3.2792	0.0016784	-0.038657	-1.9786E-05	3.2405	0.0016586	511.83384581959956	61.964	0.40236	63.921	63.689	64.091	1.9571	-0.08765	-0.00023628	NaN	49.933	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1500800			14829	1992	6914	6945							0.14360667413507144
KLIQLQFEV	9	Unmodified	_KLIQLQFEV_					0	0	0		ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.3362914919853	2	559.334424	1116.6543	1.5186	0.00084943	2.3738	0.0013278	3.8924	0.0021772	559.3352397542264	63.571	0.31472	63.571	63.429	63.744	0					16	9	2	0	0	0	0.37357	1	26485	26485		21.747	2.4897	1	668050			14830	6267	6915	6946	17543	17543					0.10063462062544204
KLIQLQFEV	9	Unmodified	_KLIQLQFEV_					0	0	0		ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3356811404228	2	559.334424	1116.6543	1.8232	0.0010198	2.0643	0.0011546	3.8875	0.0021744	559.3354492575719	62.982	0.2811	63.312	63.161	63.442	0.32974					18	8	3	0	0	0	0.37357	2	26368	26368;26413		21.747	4.8044	1	766630			14831	6267	6915	6946	17544;17545	17544					0.10063462062544204
KLIQLQFEV	9	Unmodified	_KLIQLQFEV_					0	0	0		ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3367187380791	2	559.334424	1116.6543	2.9772	0.0016652	0.145	8.1102E-05	3.1222	0.0017463	559.3344711686909	61.743	0.40775	63.161	62.957	63.365	1.4177					22	12	2	0	0	0	0.037098	2	25872	25872;25927		78.728	20.049	1	2908300			14832	6267	6915	6946	17546;17547	17546					0.10063462062544204
KLIQLQFEV	9	Unmodified	_KLIQLQFEV_					0	0	0		ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	ENST00000393179.8_1_12:89885842-89919131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3360473513603	2	559.334424	1116.6543	2.3126	0.0012935	0.63774	0.00035671	2.9504	0.0016502	559.3347802587613	61.176	0.37037	63.142	62.942	63.313	1.9653					19	11	2	0	0	0	0.049839	1	25676	25676		68.081	19.735	1	3318700			14833	6267	6915	6946	17548	17548					0.10063462062544204
KLIWFVLIFLV	11	Unmodified	_KLIWFVLIFLV_					0	0	0			REV__PKN1-EMR3|1|fusion	REV__PKN1-EMR3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	348.4764587283134	4	348.476981	1389.87882	-1.6342	-0.00056947	-0.12494	-4.354E-05	-1.7591	-0.00061301	348.4770199320388	31.871	0.9969	31.871	31.66	32.657	0					86	31	3	0	0	0	1.0362	2	13365	13365;13409		1.3296	0.82369	1	12753000	+		14834	8431	6916	6947	17549;17550	17549					0.19947196883686047
KLIWFVLIFLV	11	Unmodified	_KLIWFVLIFLV_					0	0	0			REV__PKN1-EMR3|1|fusion	REV__PKN1-EMR3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.7274352908134	4	348.476981	1389.87882	0.77962	0.00027168	-2.6233	-0.00091417	-1.8437	-0.00064249	348.4760796759304	30.759	0.97569	31.045	30.469	31.444	0.2859					88	32	3	0	0	0	1.039	1	12898	12898		0.45452	0.046251	1	3326500	+		14835	8431	6916	6947	17551	17551					0.19947196883686047
KLIWFVLIFLV	11	Unmodified	_KLIWFVLIFLV_					0	0	0			REV__PKN1-EMR3|1|fusion	REV__PKN1-EMR3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.4763976931572	4	348.476981	1389.87882	-0.37743	-0.00013153	-1.6724	-0.00058278	-2.0498	-0.0007143	348.476420364946	29.682	1.2515	30.964	30.312	31.564	1.2825					101	40	4	0	0	0	1.0156	4	12432	12280;12380;12432;12486		2.8433	1.7335	1	5197400	+		14836	8431	6916	6947	17552;17553;17554;17555	17554					0.19947196883686047
KLIWFVLIFLV	11	Unmodified	_KLIWFVLIFLV_					0	0	0			REV__PKN1-EMR3|1|fusion	REV__PKN1-EMR3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.7268859744072	4	348.476981	1389.87882	0.32226	0.0001123	-2.5946	-0.00090414	-2.2723	-0.00079184	348.4760079941895	29.243	1.058	31.042	30.206	31.264	1.7987					97	34	4	0	0	0	1.039	1	12154	12154		0.45452	0.046251	1	4132000	+		14837	8431	6916	6947	17556	17556					0.19947196883686047
KLKAWNDIKKV	11	Unmodified	_KLKAWNDIKKV_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;RPL4-KIAA0317|1|fusion;ENST00000566039.5_1_15:66793707-66797161:-|nuORF;ENST00000566622.5_1_15:66794044-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2792541384697	3	448.278362	1341.81326	3.1684	0.0014203	-2.2264	-0.00099804	0.94198	0.00042227	448.2785303902621	90.88	0.38927	91.089	90.932	91.321	0.20903					26	11	3	0	0	0	1.0388	1	38078	38078		0.50596	0.09769	1	916540			14838	4331	6917	6948	17557	17557					0.15602175690651165
KLKIPHLQK	9	Unmodified	_KLKIPHLQK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8667480349541	2	552.866226	1103.7179	2.713	0.0014999	-2.1276	-0.0011763	0.58541	0.00032365	552.8650333673814	106.04	0.15053	106.1	106.02	106.17	0.05455					19	6	4	0	0	0	0.77526	1	45078	45078		4.3292	2.2695	1	222710000			14839	3425;7900	6918	6949	17558	17558					0.170188672903123
KLKIPHLQK	9	Unmodified	_KLKIPHLQK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	552.866226	1103.7179	0.80796	0.00044669	-0.11244	-6.2163E-05	0.69552	0.00038453	552.8660642328526	106.09	0.14607	106.09	106.01	106.15	0	-0.036616	0.0023122	NaN	4.3292	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192740000			14840	3425;7900	6918	6949							0.170188672903123
KLKIPHLQK	9	Unmodified	_KLKIPHLQK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	552.866226	1103.7179	3.0153	0.0016671	-2.4026	-0.0013283	0.6127	0.00033874	552.8647528329649	106.01	0.18857	106.17	106.08	106.27	0.1586	0.045695	-0.00022009	NaN	4.3292	33	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	903030000			14841	3425;7900	6918	6949							0.170188672903123
KLKIPHLQK	9	Unmodified	_KLKIPHLQK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	552.866226	1103.7179	3.1561	0.0017449	-2.8287	-0.0015639	0.32741	0.00018101	552.8645831916081	105.98	0.1873	106.14	106.07	106.26	0.16174	0.018022	-0.00069126	NaN	4.3292	33	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	860680000			14842	3425;7900	6918	6949							0.170188672903123
KLKKAKCK	8	Unmodified	_KLKKAKCK_					0	0	0		ENSG00000204595|ENST00000376650|DPRX	ENSG00000204595|ENST00000376650|DPRX	ENSG00000204595|ENST00000376650|DPRX	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.2116882205009	3	316.212524	945.615742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.471	1	20.995	20.495	21.495	1.5237								0	0	0	1.0178	1	8091	8091		0	0	1				14843	5152	6919	6950	17559	17559					0.14075877947038862
KLKKAKCK	8	Unmodified	_KLKKAKCK_					0	0	0		ENSG00000204595|ENST00000376650|DPRX	ENSG00000204595|ENST00000376650|DPRX	ENSG00000204595|ENST00000376650|DPRX	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.2120544314384	3	316.212524	945.615742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.13	1	110.28	109.78	110.78	0.15228								0	0	0	1.0178	1	47769	47769		0	0	1				14844	5152	6919	6950	17560	17560					0.14075877947038862
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.2378723025322	4	345.485071	1377.91118	0.59905	0.00020696	0.20639	7.1306E-05	0.80545	0.00027827	345.4848846247838	28.06	0.49151	28.331	28.149	28.64	0.27119					24	15	2	0	0	0	0.14606	1	11742	11742		0.094841	0.011491	1	933830	+		14845	15006	6920	6951	17561	17561					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.4851257205009	4	345.485071	1377.91118	0.13776	4.7593E-05	0.8153	0.00028167	0.95306	0.00032927	345.48520315236226	24.384	1.1581	25.625	25.082	26.24	1.241					98	37	3	0	0	0	1.0402	1	10255	10255		0.094841	0.011491	1	3804600	+		14846	15006	6920	6951	17562	17562					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.7365905642509	4	345.485071	1377.91118	0.070832	2.4471E-05	1.0478	0.00036199	1.1186	0.00038646	345.48532879527187	25.321	0.69754	26.581	26.227	26.925	1.2594					58	22	3	0	0	0	1.0402	2	10530	10530;10577		0.094841	0.094841	1	2072900	+		14847	15006	6920	6951	17563;17564	17563					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.7367736697197	4	345.485071	1377.91118	-0.05587	-1.9302E-05	0.96922	0.00033485	0.91335	0.00031555	345.4852047462212	26.713	1.0232	27.985	27.121	28.145	1.2715					64	32	3	0	0	0	1.0402	2	11091	11091;11150		0.094841	0.011491	1	1350000	+		14848	15006	6920	6951	17565;17566	17565					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.7365905642509	4	345.485071	1377.91118	0.070832	2.4471E-05	1.0478	0.00036199	1.1186	0.00038646	345.48532879527187	25.321	0.69754	26.581	26.227	26.925	1.2594					58	22	3	0	0	0	0.14606	1	10530	10530		0.094841	0.094841	1	2072900	+		14849	15006	6920	6951	17567	17567					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.7367736697197	4	345.485071	1377.91118	-0.05587	-1.9302E-05	0.96922	0.00033485	0.91335	0.00031555	345.4852047462212	26.713	1.0232	27.985	27.121	28.145	1.2715					64	32	3	0	0	0	0.14606	1	11091	11091		0.094841	0.011491	1	1350000	+		14850	15006	6920	6951	17568	17568					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4854919314384	4	345.485071	1377.91118	0.072957	2.5205E-05	0.7335	0.00025341	0.80646	0.00027862	345.48553729426493	23.16	0.74202	24.811	24.467	25.209	1.6511					52	23	4	0	0	0	1.0402	1	9655	9655		0.094841	0.011491	1	2263400	+		14851	15006	6920	6951	17569	17569					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4856140017509	4	345.485071	1377.91118	0.1075	3.714E-05	0.88368	0.0003053	0.99118	0.00034244	345.48522838844815	23.995	1.2413	25.679	25.118	26.359	1.6845					114	41	4	0	0	0	1.0402	2	10051	10051;10102		0.094841	0.011491	1	3726900	+		14852	15006	6920	6951	17570;17571	17570					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.7359802126884	4	345.485071	1377.91118	0.19034	6.576E-05	-0.68266	-0.00023585	-0.49231	-0.00017009	345.48455369156716	26.2	1.0023	27.934	27.293	28.295	1.7342					61	32	3	0	0	0	1.0402	3	10845	10845;10905;10955		0.094841	0.094841	1	2751300	+		14853	15006	6920	6951	17572;17573;17574	17572					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2397338747978	4	345.485071	1377.91118	0.21878	7.5584E-05	0.97167	0.0003357	1.1904	0.00041128	345.4854088848989	26.796	0.6513	28.543	28.398	29.05	1.747					38	21	3	0	0	0	0.14606	1	11289	11289		0	0	1	1270300	+		14854	15006	6920	6951	17575	17575					0.23733984286695886
KLKKIFVVKLY	11	Unmodified	_KLKKIFVVKLY_					0	0	0			REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	REV__tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	345.485071	1377.91118	0.56188	0.00019412	-0.6853	-0.00023676	-0.12343	-4.2642E-05	345.73560029635115	27.512	0.77633	27.784	27.149	27.926	0.27119	-0.075193	-1.7818E-06	NaN	0.094841	46	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1283700	+		14855	15006	6920	6951							0.23733984286695886
KLKKKVAIFIF	11	Unmodified	_KLKKKVAIFIF_					0	0	0			REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.7293578982353	4	334.478518	1333.88496	-0.53941	-0.00018042	0.15102	5.0512E-05	-0.38839	-0.00012991	334.4784268717609	30.939	1.7248	32.222	31.75	33.474	1.2825					99	56	3	0	0	0	1.0402	1	13100	13100		0.094841	0.094841	1	902900	+		14856	13681	6921	6952	17576	17576					0.23137715115194624
KLKKLFKLMGI	11	Unmodified	_KLKKLFKLMGI_					0	0	0			REV__PTPRA|p.V427L|1|0.46|ENSG00000132670|chr20:3022171-3022171|G/C|missense_variant	REV__PTPRA|p.V427L|1|0.46|ENSG00000132670|chr20:3022171-3022171|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	330.1566955447197	4	330.471535	1317.85703	1.1376	0.00037594	-1.1407	-0.00037696	-0.0030994	-1.0243E-06	330.47116790203603	49.156	0.94854	49.487	49.132	50.081	0.33019					59	30	2	0	0	0	0.14606	1	20824	20824		0	0	1	922180	+		14857	14607	6922	6953	17577	17577					0.21082068863461245
KLKKLKLHK	9	Unmodified	_KLKKLKLHK_					0	0	0			REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	REV__nc|ENSG00000187742|Q96T21-2|SECISBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1135.409716784954	1	1135.80376	1134.79648	2.777	0.0031541	-3.1336	-0.0035591	-0.35659	-0.00040502	1136.8041554108597	118.11	0.095413	118.32	118.24	118.34	0.21096					4	2	2	0	0	0	0.85403	1	51060	51060		0	0	1	391430	+		14858	11548	6923	6954	17578	17578					0.23447719595378658
KLKQSRRTF	9	Unmodified	_KLKQSRRTF_					0	0	0			REV__Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|86|3|sense	REV__Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|86|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.5726806521416	3	388.571768	1162.69348	4.4407	0.0017255	-1.7527	-0.00068103	2.688	0.0010445	388.57107898025527	89.642	0.52937	90.662	90.397	90.926	1.0199					54	16	4	0	0	0	0.847	1	37778	37778		0.96228	0	1	10538000	+		14859	14169	6924	6955	17579	17579					0.1186360713677459
KLKSEKLQRR	10	Unmodified	_KLKSEKLQRR_					0	0	0			REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2740356326103	3	429.273611	1284.799	1.0986	0.00047159	-0.19541	-8.3886E-05	0.90316	0.0003877	429.2734486270638	94.41	0.52213	94.41	94.119	94.641	0					59	16	5	0	0	0	0.89803	2	39444	39444;39484		0.69767	0	1	26749000	+		14860	10070	6925	6956	17580;17581	17580					0.16799523262397997
KLKSEKLQRR	10	Unmodified	_KLKSEKLQRR_					0	0	0			REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2743408083916	3	429.273611	1284.799	3.0434	0.0013065	-1.0466	-0.00044928	1.9968	0.00085717	429.2730918306361	94.287	0.56697	94.432	94.133	94.7	0.14493					58	17	4	0	0	0	0.89803	1	39453	39453		0.69767	0	1	18456000	+		14861	10070	6925	6956	17582	17582					0.16799523262397997
KLKSEKLQRR	10	Unmodified	_KLKSEKLQRR_					0	0	0			REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.2744018435478	3	429.273611	1284.799	4.2506	0.0018247	-1.9457	-0.00083525	2.3049	0.00098941	429.27267842173205	93.592	0.50883	94.464	94.258	94.767	0.87176					44	15	4	0	0	0	0.89803	1	39367	39367		0.69767	0	1	10114000	+		14862	10070	6925	6956	17583	17583					0.16799523262397997
KLKSEKLQRR	10	Unmodified	_KLKSEKLQRR_					0	0	0			REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	REV__ENST00000508360.5_1_4:89653076-89671014:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.2746765017509	3	429.273611	1284.799	3.305	0.0014188	-0.88759	-0.00038102	2.4174	0.0010377	429.27306872150893	93.254	0.53637	94.531	94.292	94.828	1.277					50	16	4	0	0	0	0.89803	1	39205	39205		0.69767	0	1	9740400	+		14863	10070	6925	6956	17584	17584					0.16799523262397997
KLKSLLRLVKH	11	Unmodified	_KLKSLLRLVKH_					0	0	0		nc|ENSG00000135114|Q15646-2|OASL;nc|ENSG00000135114|Q15646-3|OASL;ENSG00000135114|ENST00000257570|OASL	nc|ENSG00000135114|Q15646-2|OASL	nc|ENSG00000135114|Q15646-2|OASL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.7285949587822	4	334.48032	1333.89217	-2.3175	-0.00077517	-0.51747	-0.00017308	-2.835	-0.00094825	334.4807408906752	27.546	2.2533	27.546	27.231	29.484	0					249	73	6	0	0	0	1.039	1	11692	11692		0.45452	0	1	182450000			14864	2649	6926	6957	17585	17585					0.23858447715633702
KLKSLLRLVKH	11	Unmodified	_KLKSLLRLVKH_					0	0	0		nc|ENSG00000135114|Q15646-2|OASL;nc|ENSG00000135114|Q15646-3|OASL;ENSG00000135114|ENST00000257570|OASL	nc|ENSG00000135114|Q15646-2|OASL	nc|ENSG00000135114|Q15646-2|OASL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4798461794853	4	334.48032	1333.89217	-0.046462	-1.5541E-05	-3.1589	-0.0010566	-3.2053	-0.0010721	334.48064893038537	22.694	1.8804	23.908	23.609	25.489	1.2145					295	60	7	0	0	0	1.0393	1	9730	9730		0.36667	0	1	642000000			14865	2649	6926	6957	17586	17586					0.23858447715633702
KLKTKALEPPA	11	Unmodified	_KLKTKALEPPA_					0	0	0		ENST00000484528.1_1_2:234465455-234475343:-|nuORF;ENST00000427947.7_1_2:234462980-234475343:-|nuORF;USP40|p.E747Tfs*8|1|0.22|ENSG00000085982|chr2:233521060-233521075|GAGCCAGTCAATCTCA/-|frameshift_variant;nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	ENST00000484528.1_1_2:234465455-234475343:-|nuORF	ENST00000484528.1_1_2:234465455-234475343:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2490112185478	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.3	1	111.3	110.8	111.8	0								0	0	0	0.63775	1	48138	48138		0.094841	0	1				14866	1069	6927	6958	17587	17587					0.14403109016689086
KLKTKALEPPA	11	Unmodified	_KLKTKALEPPA_					0	0	0		ENST00000484528.1_1_2:234465455-234475343:-|nuORF;ENST00000427947.7_1_2:234462980-234475343:-|nuORF;USP40|p.E747Tfs*8|1|0.22|ENSG00000085982|chr2:233521060-233521075|GAGCCAGTCAATCTCA/-|frameshift_variant;nc|ENSG00000085982|Q9NVE5|USP40;ENSG00000085982|ENST00000678225|USP40;nc|ENSG00000085982|Q9NVE5-3|USP40	ENST00000484528.1_1_2:234465455-234475343:-|nuORF	ENST00000484528.1_1_2:234465455-234475343:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2477599978447	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.39	1	111.39	110.89	111.89	0								0	0	0	0.63775	1	48176	48176		0.094841	0	1				14867	1069	6927	6958	17588	17588					0.14403109016689086
KLKTVLRYK	9	Unmodified	_KLKTVLRYK_					0	0	0		tr|A0A553SR83|A0A553SR83_NIACIGyrI-likesmallmoleculebindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00605PE=4SV=1	tr|A0A553SR83|A0A553SR83_NIACIGyrI-likesmallmoleculebindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00605PE=4SV=1	tr|A0A553SR83|A0A553SR83_NIACIGyrI-likesmallmoleculebindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8791381716728	2	574.879333	1147.74411	3.2615	0.001875	-2.7183	-0.0015627	0.54319	0.00031227	574.8777949614077	107.43	0.23232	107.59	107.49	107.72	0.15796					34	11	4	0	0	0	0.85068	1	46200	46200		0.45834	0.057624	1	401990000			14868	16545	6928	6959	17589	17589					0.17615136461768088
KLLDFGSLSNL	11	Unmodified	_KLLDFGSLSNL_					0	0	0		ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENSG00000182774|ENST00000647841|RPS17	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.8448364138603	2	603.840071	1205.66559	2.8993	0.0017507	2.5373	0.0015321	5.4366	0.0032828	603.8411841291527	70.246	0.22143	71.6	71.491	71.712	1.3536					16	6	3	0	0	0	0.041437	1	29506	29506		68.76	11.038	1	1433100			14869	4626	6929	6960	17590	17590					0.07098239366064263
KLLDFGSLSNL	11	Unmodified	_KLLDFGSLSNL_					0	0	0		ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENSG00000182774|ENST00000647841|RPS17	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	603.840071	1205.66559	1.4871	0.00089797	2.1138	0.0012764	3.6009	0.0021744	603.8411702566711	71.305	0.19293	71.628	71.527	71.72	0.32359	0.016171	-0.00060237	NaN	68.76	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320060			14870	4626	6929	6960							0.07098239366064263
KLLDFGSLSNL	11	Unmodified	_KLLDFGSLSNL_					0	0	0		ENST00000396783.2_1_6:29457050-29457287:-|nuORF;ENST00000561068.5_3_15:83205554-83208094:-|nuORF;ENST00000423610.1_1_22:32435574-32435880:+|nuORF;ENSG00000182774|ENST00000647841|RPS17	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	ENST00000396783.2_1_6:29457050-29457287:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	603.840071	1205.66559	2.898	0.0017499	5.661	0.0034183	8.559	0.0051683	603.8447321734061	69.771	0.21864	71.609	71.468	71.687	1.8378	-0.0037444	0.0036816	NaN	68.76	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1317000			14871	4626	6929	6960							0.07098239366064263
KLLDFSTRI	9	Unmodified	_KLLDFSTRI_					0	0	0		ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3262817263603	2	546.824224	1091.63389	1.633	0.00089294	-0.31793	-0.00017385	1.315	0.00071908	546.8240966304115	46.185	0.25111	46.185	46.07	46.321	0					14	7	3	0	0	0	0.62937	1	19308	19308		10.151	1.4052	1	416520			14872	7086	6930	6961	17591	17591					0.09174291402746348
KLLDFSTRI	9	Unmodified	_KLLDFSTRI_					0	0	0		ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3249389529228	2	546.824224	1091.63389	2.0393	0.0011151	-3.4668	-0.0018957	-1.4275	-0.00078058	546.8230816540763	43.444	0.2919	45.388	45.255	45.546	1.9438					15	9	2	0	0	0	0.37668	1	18211	18211		21.59	0	1	1187100			14873	7086	6930	6961	17592	17592					0.09174291402746348
KLLDFSTRI	9	Unmodified	_KLLDFSTRI_					0	0	0		ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	546.824224	1091.63389	1.7532	0.00095871	-0.48113	-0.00026309	1.2721	0.00069562	546.8240588213802	45.656	0.2022	45.985	45.847	46.049	0.32899	-0.099931	-8.1776E-05	NaN	10.151	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593190			14874	7086	6930	6961							0.09174291402746348
KLLDFSTRI	9	Unmodified	_KLLDFSTRI_					0	0	0		ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	ENST00000521797.1_1_5:162884004-162884578:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	546.824224	1091.63389	2.0725	0.0011333	0.036002	1.9687E-05	2.1085	0.001153	546.8241764464141	44.132	0.25044	45.486	45.347	45.597	1.3536	0.048773	0.0014627	NaN	21.59	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2404100			14875	7086	6930	6961							0.09174291402746348
KLLDISELDMV	11	Unmodified	_KLLDISELDMV_					0	0	0		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	638.3472778201103	2	638.346871	1274.67919	2.0501	0.0013087	0.50621	0.00032314	2.5563	0.0016318	638.3471427574967	73.013	0.2524	73.338	73.212	73.464	0.32494					18	7	3	0	0	0	0.29094	1	30535	30535		32.898	17.649	1	692150			14876	6688	6931	6962	17593	17593					0.05283729082930222
KLLDISELDMV	11	Unmodified	_KLLDISELDMV_					0	0	0		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3480102419853	2	638.346871	1274.67919	1.5392	0.00098255	0.46035	0.00029386	1.9996	0.0012764	638.3472706076341	71.953	0.43967	73.295	73.122	73.562	1.3415					35	13	4	0	0	0	0.026551	2	30213	30168;30213		91.085	59.816	1	6311300			14877	6688	6931	6962	17594;17595	17595					0.05283729082930222
KLLDISELDMV	11	Unmodified	_KLLDISELDMV_					0	0	0		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	638.3469726443291	2	638.346871	1274.67919	1.5462	0.000987	-0.72716	-0.00046418	0.81902	0.00052282	638.346911691435	71.51	0.37961	73.334	73.159	73.539	1.824					33	11	4	0	0	0	0.022207	2	29985	29985;30033		97.741	69.247	1	6191300			14878	6688	6931	6962	17596;17597	17596					0.05283729082930222
KLLDISELDMV	11	Oxidation (M)	_KLLDISELDM(Oxidation (M))V_		KLLDISELDM(1)V		KLLDISELDM(41)V	0	0	1		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	646.3459350466728	2	646.344329	1290.6741	2.3919	0.001546	-0.97733	-0.00063169	1.4146	0.00091429	646.3451046534948	63.247	0.2833	64.66	64.502	64.785	1.4134					20	8	3	0	0	0	0.18339	1	26538	26538		41.347	27.732	1	886650			14879	6688	6931	6963	17598	17598		108			0.04039425220321391
KLLDISELDMV	11	Oxidation (M)	_KLLDISELDM(Oxidation (M))V_		KLLDISELDM(1)V		KLLDISELDM(61)V	0	0	1		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.3461791872978	2	646.344329	1290.6741	2.5636	0.001657	0.69342	0.00044819	3.257	0.0021051	646.3447943942554	62.698	0.28094	64.643	64.501	64.782	1.9444					18	8	3	0	0	0	0.076858	1	26307	26307		60.899	34.631	1	1368300			14880	6688	6931	6963	17599	17599		108			0.04039425220321391
KLLDISELDMV	11	Oxidation (M)	_KLLDISELDM(Oxidation (M))V_					0	0	1		ENST00000463820.5_1_4:1985048-1993691:-|nuORF;ENST00000467661.5_1_4:1985048-1988196:-|nuORF;NELFA|p.T512Sfs*11|1|0.24|ENSG00000185049|chr4:1983365-1983371|TGGCCCG/-|frameshift_variant;ENSG00000185049|ENST00000382882|NELFA	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	ENST00000463820.5_1_4:1985048-1993691:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	646.344329	1290.6741	1.824	0.0011789	1.6518	0.0010677	3.4758	0.0022466	646.3467475872238	64.394	0.22807	64.723	64.626	64.854	0.32899	0.047751	0.0017539	NaN	60.899	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234410			14881	6688	6931	6963				108			0.04039425220321391
KLLDTMVDTFL	11	Unmodified	_KLLDTMVDTFL_					0	0	0		nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;ENST00000606952.5_1_1:156182806-156203452:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.3511230349541	2	648.349414	1294.68428	2.4508	0.001589	0.85817	0.0005564	3.309	0.0021454	648.3494957457406	79.253	0.37569	80.52	80.284	80.66	1.2668					25	11	3	0	0	0	0.13365	1	33275	33275		49.742	15.34	1	1522700			14882	3574	6932	6964	17600	17600					0.0487203294558185
KLLDTMVDTFL	11	Unmodified	_KLLDTMVDTFL_					0	0	0		nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;ENST00000606952.5_1_1:156182806-156203452:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.3488036990166	2	648.349414	1294.68428	2.1891	0.0014193	-0.11771	-7.6318E-05	2.0714	0.001343	648.3489009691227	78.756	0.40182	80.491	80.382	80.784	1.735					18	12	2	0	0	0	0.028056	1	33052	33052		81.915	40.076	1	1845900			14883	3574	6932	6964	17601	17601					0.0487203294558185
KLLDTMVDTFL	11	Unmodified	_KLLDTMVDTFL_					0	0	0		nc|ENSG00000160783|Q6P1K2-3|PMF1;nc|ENSG00000160783|Q6P1K2-6|PMF1;ENSG00000160783|ENST00000368277|PMF1;nc|ENSG00000160783|Q6P1K2-5|PMF1;ENST00000606952.5_1_1:156182806-156203452:+|nuORF;nc|ENSG00000160783|Q6P1K2-2|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	nc|ENSG00000160783|Q6P1K2-3|PMF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	648.349414	1294.68428	1.7927	0.0011623	2.7582	0.0017883	4.5509	0.0029506	648.3500246364409	80.223	0.18668	80.523	80.385	80.571	0.30047	0.012038	0.0027542	NaN	81.915	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388340			14884	3574	6932	6964							0.0487203294558185
KLLEEQGIFL	10	Unmodified	_KLLEEQGIFL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.3466674685478	2	595.344989	1188.67542	2.4767	0.0014745	-0.26758	-0.0001593	2.2091	0.0013152	595.3449960682433	61.202	0.37866	61.202	61.014	61.393	0					26	11	3	0	0	0	0.12602	2	25536	25485;25536		59.368	17.413	1	2155700			14885	2336	6933	6965	17602;17603	17603					0.08863427371420585
KLLEEQGIFL	10	Unmodified	_KLLEEQGIFL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	595.3465453982353	2	595.344989	1188.67542	2.0855	0.0012416	0.32582	0.00019398	2.4113	0.0014355	595.3454701513532	60.551	0.34779	60.879	60.696	61.044	0.32809					23	10	3	0	0	0	0.21129	2	25390	25336;25390		47.594	5.6388	1	1848800			14886	2336	6933	6965	17604;17605	17605					0.08863427371420585
KLLEEQGIFL	10	Unmodified	_KLLEEQGIFL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.3462402224541	2	595.344989	1188.67542	2.5359	0.0015097	-0.063316	-3.7695E-05	2.4726	0.001472	595.3449828856019	59.299	0.39748	60.718	60.497	60.895	1.4196					33	12	3	0	0	0	0.054878	3	24828	24828;24871;24917		107.1	34.132	1	8387800			14887	2336	6933	6965	17606;17607;17608	17606					0.08863427371420585
KLLEEQGIFL	10	Unmodified	_KLLEEQGIFL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.3459960818291	2	595.344989	1188.67542	2.312	0.0013764	-0.054549	-3.2476E-05	2.2574	0.0013439	595.3448580240376	58.773	0.3959	60.742	60.544	60.94	1.969					38	12	4	0	0	0	0.05462	3	24672	24623;24672;24718		96.367	29.91	1	8030200			14888	2336	6933	6965	17609;17610;17611	17610					0.08863427371420585
KLLEPVLLL	9	Unmodified	_KLLEPVLLL_					0	0	0		ENSG00000105193|ENST00000251453|RPS16	ENSG00000105193|ENST00000251453|RPS16	ENSG00000105193|ENST00000251453|RPS16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3545410037041	2	519.352086	1036.68962	3.5499	0.0018437	0.83534	0.00043384	4.3853	0.0022775	519.3525521922313	74.227	0.60883	75.545	75.279	75.888	1.318					67	19	5	0	0	0	0.037098	2	31135	31135;31174		78.728	7.7474	1	79949000			14889	1501	6934	6966	17612;17613	17612					0.1727412459038078
KLLEPVLLL	9	Unmodified	_KLLEPVLLL_					0	0	0		ENSG00000105193|ENST00000251453|RPS16	ENSG00000105193|ENST00000251453|RPS16	ENSG00000105193|ENST00000251453|RPS16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3542358279228	2	519.352086	1036.68962	2.9511	0.0015327	0.6443	0.00033462	3.5954	0.0018673	519.3524444025021	73.724	1.0509	75.52	75.224	76.275	1.7962					85	33	5	0	0	0	0.070055	1	30939	30939		60.074	5.3004	1	63357000			14890	1501	6934	6966	17614	17614					0.1727412459038078
KLLETKWTL	9	Unmodified	_KLLETKWTL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7	CON__P08729	CON__P08729	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	566.6406127810478	2	566.342249	1130.66995	1.6709	0.00094629	0.70016	0.00039653	2.371	0.0013428	566.3426674824473	43.905	0.30729	44.229	44.087	44.395	0.32389					16	9	2	0	0	0	0.076768	1	18467	18467		38.615	19.253	1	971210		+	14891	345	6935	6967	17615	17615					0.1098374857961062
KLLETKWTL	9	Unmodified	_KLLETKWTL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3433715701103	2	566.342249	1130.66995	1.9094	0.0010814	0.70295	0.00039811	2.6123	0.0014795	566.3426742384992	42.376	0.41467	43.716	43.476	43.891	1.3399					33	12	3	0	0	0	0.0012963	3	17753	17716;17753;17815		154.75	79.824	1	5497500		+	14892	345	6935	6967	17616;17617;17618	17617					0.1098374857961062
KLLETKWTL	9	Unmodified	_KLLETKWTL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.8978454470634	3	377.897258	1130.66995	1.0171	0.00038434	0.25256	9.5443E-05	1.2696	0.00047979	377.8974028737817	42.375	0.41467	43.715	43.476	43.891	1.3399					31	12	3	0	0	0	0.26741	1	17757	17757		27.088	11.35	1	3834500		+	14893	345	6935	6967	17619	17619					0.1098374857961062
KLLETKWTL	9	Unmodified	_KLLETKWTL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3444091677666	2	566.342249	1130.66995	1.7882	0.0010127	0.85503	0.00048424	2.6432	0.001497	566.3427755375038	41.826	0.3826	43.718	43.476	43.859	1.8927					29	11	3	0	0	0	0.0074083	2	17546	17494;17546		121.5	57.543	1	4973000		+	14894	345	6935	6967	17620;17621	17621					0.1098374857961062
KLLETKWTL	9	Unmodified	_KLLETKWTL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.8979064822197	3	377.897258	1130.66995	1.4923	0.00056395	0.11063	4.1805E-05	1.603	0.00060576	377.89731715255135	41.821	0.3826	43.714	43.476	43.859	1.8927					30	11	3	0	0	0	0.17038	1	17520	17520		36.395	13.62	1	4640400		+	14895	345	6935	6967	17622	17622					0.1098374857961062
KLLEVNGVAL	10	Unmodified	_KLLEVNGVAL_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3275634646416	2	528.326599	1054.63865	1.0658	0.00056309	0.79243	0.00041866	1.8582	0.00098175	528.3269895513505	52.113	0.33587	53.51	53.346	53.682	1.3966					23	10	3	0	0	0	0.067431	2	21832	21784;21832		106.94	20.399	1	6123300			14896	4559	6936	6968	17623;17624	17624					0.11351175545519254
KLLEVNGVAL	10	Unmodified	_KLLEVNGVAL_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3267700076103	2	528.326599	1054.63865	0.66031	0.00034886	0.092655	4.8952E-05	0.75296	0.00039781	528.3265640705935	51.5	0.3392	53.475	53.311	53.65	1.9753					24	10	3	0	0	0	0.062288	2	21596	21596;21642		96.367	40.19	1	8318700			14897	4559	6936	6968	17625;17626	17625					0.11351175545519254
KLLEVNGVAL	10	Unmodified	_KLLEVNGVAL_					0	0	0		nc|ENSG00000180900|Q14160-2|SCRIB;nc|ENSG00000180900|Q14160|SCRIB;ENSG00000180900|ENST00000356994|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	nc|ENSG00000180900|Q14160-2|SCRIB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	528.326599	1054.63865	2.0264	0.0010706	1.6181	0.00085487	3.6445	0.0019255	528.3272730751684	53.92	0.24734	53.92	53.808	54.055	0	0.29015	0.0008226	NaN	96.367	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	978310			14898	4559	6936	6968							0.11351175545519254
KLLEVQILEV	10	Unmodified	_KLLEVQILEV_					0	0	0		ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	ENSG00000135968|ENST00000309863|GCC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3690673708916	2	592.368464	1182.72238	1.8311	0.0010847	-0.064417	-3.8158E-05	1.7667	0.0010465	592.3682995659144	66.933	0.34581	68.322	68.121	68.467	1.3888					22	10	3	0	0	0	0.058871	1	28047	28047		93.166	11.276	1	2842000			14899	2696	6937	6969	17627	17627					0.1383228692254761
KLLFWVTEV	9	Unmodified	_KLLFWVTEV_					0	0	0		ENSG00000075188|ENST00000552283|NUP37	ENSG00000075188|ENST00000552283|NUP37	ENSG00000075188|ENST00000552283|NUP37	MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8334838747978	2	567.831517	1133.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.876	1	77.169	76.669	77.669	1.2938								0	0	0	0.045037	1	31846	31846		51.63	24.001	1				14900	925	6938	6970	17628	17628					0.08700363550883594
KLLKEITEAPP	11	Unmodified	_KLLKEITEAPP_					0	0	0		nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;ENSG00000137501|ENST00000359152|SYTL2	nc|ENSG00000137501|Q9HCH5-12|SYTL2	nc|ENSG00000137501|Q9HCH5-12|SYTL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8702880740166	2	619.871371	1237.72819	2.3481	0.0014556	-2.5532	-0.0015826	-0.20501	-0.00012708	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	1.0191	1	32729	32729		5.7319	1.7875	1	8928300			14901	2772	6939	6971	17629	17629					0.11883385434202864
KLLKKKVNP	9	Unmodified	_KLLKKKVNP_					0	0	0		tr|A0A7D6VYQ6|A0A7D6VYQ6_9CLOTPTSmannosetransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=manZPE=4SV=1	tr|A0A7D6VYQ6|A0A7D6VYQ6_9CLOTPTSmannosetransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=manZPE=4SV=1	tr|A0A7D6VYQ6|A0A7D6VYQ6_9CLOTPTSmannosetransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=manZPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1067.731616199017	1	1067.72993	1066.72265	1.294	0.0013817	0.69757	0.00074481	1.9916	0.0021265	1067.7303623533596	35.26	0.03413	37.078	37.063	37.097	1.8176					5	3	2	0	0	0	0.76456	1	14792	14792		4.756	0	1	4273200			14902	17002	6940	6972	17630	17630					0.19195751433085206
KLLKLFYIKK	10	Unmodified	_KLLKLFYIKK_					0	0	0		ENSG00000117501|ENST00000367759|MROH9	ENSG00000117501|ENST00000367759|MROH9	ENSG00000117501|ENST00000367759|MROH9	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4368774294853	2	647.436484	1292.85842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.42	1	108.57	108.07	109.07	0.1548								0	0	0	0.6624	1	46800	46800		0.40072	0	1				14903	2012	6941	6973	17631	17631					0.2237002622387081
KLLLHRITFV	10	Unmodified	_KLLLHRITFV_					0	0	0		tr|A0A7D6VT62|A0A7D6VT62_9CLOTcardiolipinsynthaseOS=ClostridiumintestinaleOX=36845GN=clsPE=4SV=1	tr|A0A7D6VT62|A0A7D6VT62_9CLOTcardiolipinsynthaseOS=ClostridiumintestinaleOX=36845GN=clsPE=4SV=1	tr|A0A7D6VT62|A0A7D6VT62_9CLOTcardiolipinsynthaseOS=ClostridiumintestinaleOX=36845GN=clsPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1346313357353	4	310.703855	1238.78631	-2.8418	-0.00088295	-3.9567	-0.0012294	-6.7985	-0.0021123	310.9536865542295	27.652	0.33435	27.652	27.471	27.805	0					20	10	3	0	0	0	0.12561	1	11602	11602		0.15932	0	1	340020			14904	16902	6942	6974	17632	17632					0.17647111870132903
KLLLKLAL	8	Unmodified	_KLLLKLAL_					0	0	0			REV__tr|A0A553SKA4|A0A553SKA4_NIACIHollidayjunctionbranchmigrationcomplexsubunitRuvAOS=NialliacirculansOX=1397GN=ruvAPE=3SV=1	REV__tr|A0A553SKA4|A0A553SKA4_NIACIHollidayjunctionbranchmigrationcomplexsubunitRuvAOS=NialliacirculansOX=1397GN=ruvAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3218566775322	2	456.336239	910.657924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.382	1	99.463	98.963	99.963	0.080376								0	0	0	1.0178	1	41609	41609		0	0	1		+		14905	14940	6943	6975	17633	17633					0.19902176627056178
KLLLKLAL	8	Unmodified	_KLLLKLAL_					0	0	0			REV__tr|A0A553SKA4|A0A553SKA4_NIACIHollidayjunctionbranchmigrationcomplexsubunitRuvAOS=NialliacirculansOX=1397GN=ruvAPE=3SV=1	REV__tr|A0A553SKA4|A0A553SKA4_NIACIHollidayjunctionbranchmigrationcomplexsubunitRuvAOS=NialliacirculansOX=1397GN=ruvAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3369323611259	2	456.336239	910.657924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.444	1	99.524	99.024	100.02	0.080376								0	0	0	1.0178	1	41635	41635		0	0	1		+		14906	14940	6943	6975	17634	17634					0.19902176627056178
KLLLLLRSS	9	Unmodified	_KLLLLLRSS_					0	0	0			REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	REV__ENST00000526104.5_2_11:208097-208547:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2363464236259	3	348.237615	1041.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.762	1	26.003	25.503	26.503	1.241								0	0	0	0.42693	1	10360	10360		0.20686	0.047535	1		+		14907	13664	6944	6976	17635	17635					0.17183758679129824
KLLLRWLP	8	Unmodified	_KLLLRWLP_					0	0	0		ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.4008056521416	2	519.844762	1037.67497	3.3136	0.0017226	-2.9459	-0.0015314	0.36769	0.00019114	519.8411045566081	103.43	0.10884	103.59	103.51	103.62	0.16445					7	4	2	0	0	0	2.3239	1	43591	43591		0.79363	0	1	1196700			14908	7496	6945	6977	17636	17636					0.15764097232863605
KLLLRWLP	8	Unmodified	_KLLLRWLP_					0	0	0		ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	519.844762	1037.67497	1.4643	0.0007612	-1.5902	-0.00082664	-0.12589	-6.5446E-05	519.8427515130415	103.46	0.1174	103.46	103.41	103.52	0	-0.069589	0.0011491	NaN	0.79363	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4283700			14909	7496	6945	6977							0.15764097232863605
KLLLRWLP	8	Unmodified	_KLLLRWLP_					0	0	0		ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	ENST00000592819.1_2_19:13010157-13010840:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	519.844762	1037.67497	2.9153	0.0015155	-3.1899	-0.0016582	-0.27458	-0.00014274	519.842166655427	103.45	0.1662	103.51	103.39	103.56	0.059502	-0.012678	-0.00051403	NaN	0.79363	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3725300			14910	7496	6945	6977							0.15764097232863605
KLLPDLEVL	9	Unmodified	_KLLPDLEVL_					0	0	0		ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	ENSG00000167880|ENST00000301607|EVPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2209655642509	3	347.218109	1038.6325	1.4928	0.00051833	3.5263	0.0012244	5.0191	0.0017427	347.21982630972025	44.649	0.48042	46.608	46.448	46.928	1.9596					37	14	3	0	0	0	0.84195	1	18816	18816		0.86438	0	1	2116600			14911	3999	6946	6978	17637	17637					0.11472657313993295
KLLPQLTYL	9	Unmodified	_KLLPQLTYL_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ANP32A|p.G147V|1|0.1|ENSG00000140350|chr15:68784483-68784483|C/A|missense_variant;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.8401367068291	2	544.839342	1087.66413	1.6988	0.00092555	1.269	0.0006914	2.9678	0.001617	544.8396988960043	64.141	0.2887	64.141	64.013	64.302	0					14	8	2	0	0	0	0.20244	2	26746	26746;26800		32.786	12.332	1	858500			14912	2752;2909	6947	6979	17638;17639	17638					0.12380650067916577
KLLPQLTYL	9	Unmodified	_KLLPQLTYL_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ANP32A|p.G147V|1|0.1|ENSG00000140350|chr15:68784483-68784483|C/A|missense_variant;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8403808474541	2	544.839342	1087.66413	1.9023	0.0010364	-1.4409	-0.00078509	0.46135	0.00025136	544.8381370907153	63.597	0.30036	63.926	63.756	64.056	0.32899					17	9	2	0	0	0	0.1388	2	26625	26625;26679		39.95	15.929	1	1353700			14913	2752;2909	6947	6979	17640;17641	17640					0.12380650067916577
KLLPQLTYL	9	Unmodified	_KLLPQLTYL_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ANP32A|p.G147V|1|0.1|ENSG00000140350|chr15:68784483-68784483|C/A|missense_variant;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8409301638603	2	544.839342	1087.66413	2.7682	0.0015082	0.54169	0.00029513	3.3099	0.0018034	544.8394235641634	62.281	0.38096	63.699	63.492	63.873	1.4177					27	11	3	0	0	0	0.019432	2	26130	26081;26130		99.799	29.828	1	5313500			14914	2752;2909	6947	6979	17642;17643	17643					0.12380650067916577
KLLPQLTYL	9	Unmodified	_KLLPQLTYL_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ANP32A|p.G147V|1|0.1|ENSG00000140350|chr15:68784483-68784483|C/A|missense_variant;ENST00000486769.1_1_9:100760930-100767440:+|nuORF;ENSG00000140350|ENST00000465139|ANP32A;ENST00000483551.6_1_15:69072422-69081590:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8402587771416	2	544.839342	1087.66413	2.5768	0.001404	0.40398	0.00022011	2.9808	0.0016241	544.8390756476582	61.692	0.3827	63.649	63.465	63.847	1.9571					29	11	3	0	0	0	0.019432	2	25908	25862;25908		99.799	48.169	1	4683900			14915	2752;2909	6947	6979	17644;17645	17645					0.12380650067916577
KLLRKIIKKYL	11	Unmodified	_KLLRKIIKKYL_					0	0	0			REV__CON__P02777	REV__CON__P02777	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.5023071169853	2	708.494865	1414.97518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.62	1	109.78	109.28	110.28	0.15228								0	0	0	0.63775	1	47546	47546		0.30703	0	1		+	+	14916	8378	6948	6980	17646	17646					0.28428764443651744
KLLRKIIKKYL	11	Unmodified	_KLLRKIIKKYL_					0	0	0			REV__CON__P02777	REV__CON__P02777	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4953491091728	2	708.494865	1414.97518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.74	1	109.89	109.39	110.39	0.15228								0	0	0	0.63775	1	47599	47599		0.30703	0	1		+	+	14917	8378	6948	6980	17647	17647					0.28428764443651744
KLLRLKHKDI	10	Unmodified	_KLLRLKHKDI_					0	0	0			REV__tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	REV__tr|A0A553SN15|A0A553SN15_NIACID-2-hydroxyaciddehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_23445PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	632.3181030154228	2	632.416614	1262.81868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.04	1	100.22	99.721	100.72	0.18047								0	0	0	0.6624	1	42103	42103		0.40072	0	1		+		14918	15040	6949	6981	17648	17648					0.1977789927318554
KLLSKFYEL	9	Unmodified	_KLLSKFYEL_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.8380004763603	2	570.8368	1139.65905	1.6664	0.00095124	0.73826	0.00042143	2.4046	0.0013727	570.8375457210723	43.124	0.25779	43.448	43.321	43.579	0.32388					12	7	2	0	0	0	0.42097	1	18124	18124		19.362	3.2128	1	528320			14919	1142	6950	6982	17649	17649					0.09480346205350543
KLLSKFYEL	9	Unmodified	_KLLSKFYEL_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8378173708916	2	570.8368	1139.65905	2.298	0.0013118	-0.073725	-4.2085E-05	2.2243	0.0012697	570.8365791269177	41.335	0.41297	42.661	42.462	42.875	1.3254					30	12	3	0	0	0	0.087723	1	17358	17358		53.404	11.448	1	1755900			14920	1142	6950	6982	17650	17650					0.09480346205350543
KLLSKFYEL	9	Unmodified	_KLLSKFYEL_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-4|USP48;nc|ENSG00000090686|Q86UV5-7|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8384887576103	2	570.8368	1139.65905	2.0774	0.0011859	0.31851	0.00018182	2.3959	0.0013677	570.837058556363	40.934	0.38236	42.827	42.641	43.024	1.8927					23	11	3	0	0	0	0.042285	2	17174	17121;17174		74.2	28.5	1	1617200			14921	1142	6950	6982	17651;17652	17652					0.09480346205350543
KLLTVPNK	8	Unmodified	_KLLTVPNK_					0	0	0			REV__ENST00000583976.1_1_17:57189640-57232487:-|nuORF	REV__ENST00000583976.1_1_17:57189640-57232487:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7988464236259	2	456.797478	911.580402	3.4736	0.0015867	-1.0627	-0.00048542	2.4109	0.0011013	456.7974744159771	109.16	0.33649	109.32	109.15	109.49	0.1548					31	15	3	0	0	0	0.89187	1	47340	47340		0.69038	0	1	47084000	+		14922	14007	6951	6983	17653	17653					0.12107538690884212
KLLVMPRN	8	Unmodified	_KLLVMPRN_					0	0	0			REV__nc|ENSG00000143379|Q15047-2|SETDB1	REV__nc|ENSG00000143379|Q15047-2|SETDB1	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2010681033134	3	324.200395	969.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.721	1	37.023	36.523	37.523	0.30197								0	0	0	1.0178	1	15443	15443		3.5965	0	1		+		14923	10208	6952	6984	17654	17654					0.09335001050339997
KLLYLFLAILL	11	Unmodified	_KLLYLFLAILL_					0	0	0		nc|ENSG00000180483|Q8N690-3|DEFB119;ENSG00000180483|ENST00000376321|DEFB119;nc|ENSG00000180483|Q8N690-2|DEFB119	nc|ENSG00000180483|Q8N690-3|DEFB119	nc|ENSG00000180483|Q8N690-3|DEFB119	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	330.8938781619072	4	330.722984	1318.86283	-0.06435	-2.1282E-05	-0.016056	-5.3102E-06	-0.080406	-2.6592E-05	330.72273173466255	22.689	0.55128	23.904	23.769	24.32	1.2145					21	17	2	0	0	0	0.14606	1	9608	9608		0.094841	0	1	734150			14924	4549	6953	6985	17655	17655					0.21615490646786384
KLLYLFLAILL	11	Unmodified	_KLLYLFLAILL_					0	0	0		nc|ENSG00000180483|Q8N690-3|DEFB119;ENSG00000180483|ENST00000376321|DEFB119;nc|ENSG00000180483|Q8N690-2|DEFB119	nc|ENSG00000180483|Q8N690-3|DEFB119	nc|ENSG00000180483|Q8N690-3|DEFB119	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	330.722984	1318.86283	-0.04933	-1.6315E-05	-1.3314	-0.00044033	-1.3807	-0.00045664	330.72230890966375	22.565	0.63367	24.217	23.741	24.375	1.6511	0.15644	-0.00059537	NaN	0.094841	27	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612350			14925	4549	6953	6985							0.21615490646786384
KLMELLEEI	9	Unmodified	_KLMELLEEI_					0	0	0		nc|ENSG00000173418|P61599-2|NAA20;ENSG00000173418|ENST00000334982|NAA20	nc|ENSG00000173418|P61599-2|NAA20	nc|ENSG00000173418|P61599-2|NAA20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3115112185478	2	559.3123	1116.61005	2.8436	0.0015905	-3.4239	-0.0019151	-0.58033	-0.00032459	559.3094803113612	69.791	0.38012	71.629	71.468	71.849	1.8378					41	11	5	0	0	0	0.12216	1	29331	29331		41.956	7.5538	1	6576000			14926	4281	6954	6986	17656	17656					0.056406898540672046
KLMTALVNV	9	Unmodified	_KLMTALVNV_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;ENST00000462818.1_1_3:136219063-136323180:-|nuORF;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1	ENSG00000101972|ENST00000371145|STAG2	MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7982971072197	2	494.79662	987.578688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.362	1	46.727	46.227	47.227	1.3653								0	0	0	0.35665	1	19005	19005		13.042	2.2185	1				14927	1372;2027	6955	6987	17657	17657					0.08440161610633368
KLMTALVNV	9	Unmodified	_KLMTALVNV_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2;ENST00000462818.1_1_3:136219063-136323180:-|nuORF;nc|ENSG00000118007|Q8WVM7-2|STAG1;ENSG00000118007|ENST00000383202|STAG1	ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000118007|Q8WVM7-2|STAG1	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7985412478447	2	494.79662	987.578688	2.0036	0.0009914	1.3568	0.00067135	3.3605	0.0016627	494.7974153329578	44.742	0.31815	46.702	46.513	46.831	1.9596					15	9	2	0	0	0	0.20244	1	18742	18742		32.786	13.529	1	625650			14928	1372;2027	6955	6987	17658	17658					0.08440161610633368
KLMVLAHVIGL	11	Unmodified	_KLMVLAHVIGL_					0	0	0			REV__tr|A0A553SMN2|A0A553SMN2_NIACIRibonucleaseHOS=NialliacirculansOX=1397GN=CEQ21_22765PE=3SV=1	REV__tr|A0A553SMN2|A0A553SMN2_NIACIRibonucleaseHOS=NialliacirculansOX=1397GN=CEQ21_22765PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.5857421755791	3	398.586138	1192.73659	0.080825	3.2216E-05	-2.0468	-0.00081581	-1.9659	-0.00078359	398.58560658779015	32.84	0.49483	34.119	33.824	34.319	1.2782					38	17	3	0	0	0	1.0224	1	13790	13790		2.4348	1.1051	1	4555000	+		14929	15028	6956	6988	17659	17659					0.14792660869852625
KLMVLAHVIGL	11	Unmodified	_KLMVLAHVIGL_					0	0	0			REV__tr|A0A553SMN2|A0A553SMN2_NIACIRibonucleaseHOS=NialliacirculansOX=1397GN=CEQ21_22765PE=3SV=1	REV__tr|A0A553SMN2|A0A553SMN2_NIACIRibonucleaseHOS=NialliacirculansOX=1397GN=CEQ21_22765PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.5858337283134	3	398.586138	1192.73659	0.68539	0.00027319	-2.4082	-0.00095987	-1.7228	-0.00068669	398.5852853093219	32.739	0.37238	34.564	34.303	34.675	1.8246					33	18	2	0	0	0	0.9945	1	13724	13724		4.1166	2.3744	1	4818500	+		14930	15028	6956	6988	17660	17660					0.14792660869852625
KLNDLIQRL	9	Unmodified	_KLNDLIQRL_					0	0	0		ENSG00000122218|ENST00000241704|COPA;nc|ENSG00000122218|P53621-2|COPA	ENSG00000122218|ENST00000241704|COPA	ENSG00000122218|ENST00000241704|COPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8441650271416	2	556.842948	1111.67134	1.7854	0.00099421	0.62333	0.0003471	2.4088	0.0013413	556.8432198083633	41.587	0.21692	43.479	43.356	43.573	1.8927					11	6	2	0	0	0	0.16939	1	17418	17418		36.506	17.144	1	732280			14931	2150	6957	6989	17661	17661					0.11997382668369028
KLNVILKQTAR	11	Unmodified	_KLNVILKQTAR_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	321.9804260134697	4	321.709403	1282.8085	1.4624	0.00047047	2.0825	0.00066995	3.5449	0.0011404	321.7099607406253	55.934	0.71162	56.255	55.707	56.418	0.32088					30	23	2	0	0	0	0.14606	1	23333	23333		0.08335	0.010087	1	3180800	+		14932	14463	6958	6990	17662	17662					0.17841291547938454
KLNVILKQTAR	11	Unmodified	_KLNVILKQTAR_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	321.709403	1282.8085	1.4336	0.0004612	0.64566	0.00020771	2.0792	0.00066891	321.7095990770561	54.365	0.52858	56.333	55.938	56.467	1.9684	0.038965	-0.0009014	NaN	0.08335	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5229900	+		14933	14463	6958	6990							0.17841291547938454
KLPDVYGVF	9	Unmodified	_KLPDVYGVF_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2864868044853	2	519.286943	1036.55933	0.67299	0.00034948	0.47797	0.0002482	1.151	0.00059768	519.2866019123452	57.835	0.30943	59.253	59.131	59.44	1.4181					35	20	3	0	0	0	0.032536	2	24219	24219;24263		81.89	27.117	1	10854000			14934	5360	6959	6991	17663;17664	17663					0.042515285913850676
KLPDVYGVF	9	Unmodified	_KLPDVYGVF_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2866088747978	2	519.286943	1036.55933	0.59422	0.00030857	0.47105	0.00024461	1.0653	0.00055318	519.2867871380683	57.295	0.27142	59.264	59.115	59.387	1.9684					39	19	3	0	0	0	0.026411	2	24007	24007;24044		92.491	48.997	1	11161000			14935	5360	6959	6991	17665;17666	17665					0.042515285913850676
KLPDVYGVFQF	11	Unmodified	_KLPDVYGVFQF_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8532592654228	2	656.850438	1311.68632	2.2772	0.0014958	0.78711	0.00051701	3.0644	0.0020128	656.8508050226473	75.99	0.38978	77.283	77.068	77.458	1.2938					37	12	4	0	0	0	0.027832	2	31872	31872;31926		83.278	54.196	1	4528100			14936	5360	6960	6992	17667;17668	17667					0.04294829745686002
KLPDVYGVFQF	11	Unmodified	_KLPDVYGVFQF_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8532592654228	2	656.850438	1311.68632	2.6729	0.0017557	0.875	0.00057474	3.5479	0.0023305	656.8507850575247	75.461	0.33394	77.242	77.072	77.406	1.7817					25	10	3	0	0	0	0.026368	1	31637	31637		92.201	56.074	1	5281700			14937	5360	6960	6992	17669	17669					0.04294829745686002
KLPFVEAFQV	10	Unmodified	_KLPFVEAFQV_					0	0	0			REV__ENSG00000243749|ENST00000373337|TMEM35B	REV__ENSG00000243749|ENST00000373337|TMEM35B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	393.2515746951103	3	393.225375	1176.6543	4.9126	0.0019318	-1.978	-0.00077781	2.9346	0.001154	393.55797884220004	89.247	0.12938	90.267	90.171	90.3	1.0199					5	3	2	0	0	0	0.12556	1	37604	37604		1.9064	1.4004	1	109170	+		14938	11936	6961	6993	17670	17670					0.073034620625549
KLPIDVKRLVI	11	Unmodified	_KLPIDVKRLVI_					0	0	0			REV__tr|A0A553SST7|A0A553SST7_NIACIo-succinylbenzoatesynthaseOS=NialliacirculansOX=1397GN=menCPE=4SV=1	REV__tr|A0A553SST7|A0A553SST7_NIACIo-succinylbenzoatesynthaseOS=NialliacirculansOX=1397GN=menCPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4371215701103	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.19	1	109.35	108.85	109.85	0.1548								0	0	0	0.63775	1	47302	47302		1.1933	0.84271	1		+		14939	15213	6962	6994	17671	17671					0.21967936730175097
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9882690310478	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.0391	1	14363	14363		0.40827	0.31342	1	399160000	+		14940	8513	6963	6995	17672	17672					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9875976443291	4	362.987572	1447.92118	1.0375	0.00037658	-2.2419	-0.00081379	-1.2045	-0.00043721	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.0402	1	13797	13797		0.094841	0.011491	1	559590000	+		14941	8513	6963	6995	17673	17673					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.9656860232353	2	724.967868	1447.92118	0.11617	8.4221E-05	-2.2447	-0.0016273	-2.1285	-0.0015431	724.9657269356576	31.477	0.33385	32.758	32.469	32.803	1.2813					19	10	3	0	0	0	1.0388	2	13197	13152;13197		1.3295	1.0225	1	4553400	+		14942	8513	6963	6995	17674;17675	17675					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.6467162966728	3	483.647671	1447.92118	0.76652	0.00037073	-1.9243	-0.00093068	-1.1578	-0.00055995	483.646612066779	31.477	1.0673	32.758	32.375	33.442	1.2813					111	35	5	0	0	0	1.0388	4	13270	13193;13231;13270;13312		0.50596	0.36606	1	25713000	+		14943	8513	6963	6995	17676;17677;17678;17679	17678					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.9796935915947	3	483.647671	1447.92118	0.59235	0.00028649	-3.4948	-0.0016902	-2.9024	-0.0014037	483.6456306301159	33.391	0.18752	34.665	34.593	34.78	1.2746					30	15	3	0	0	0	1.0388	2	14031	13986;14031		0.50596	0.051438	1	45811000	+		14944	8513	6963	6995	17680;17681	17681					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	725.4665405154228	2	724.967868	1447.92118	0.11617	8.4221E-05	-2.2447	-0.0016273	-2.1285	-0.0015431	724.9657269356576	31.477	0.33385	32.758	32.469	32.803	1.2813					19	10	3	0	0	0	0.14606	1	13152	13152		1.3295	1.0225	1	4553400	+		14945	8513	6963	6995	17682	17682					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9871703982353	4	362.987572	1447.92118	0.47661	0.000173	-2.3703	-0.00086039	-1.8937	-0.00068739	362.9877963273164	30.842	1.2035	32.657	32.231	33.435	1.8151					129	40	6	0	0	0	1.0402	1	12813	12813		0.094841	0.011491	1	538960000	+		14946	8513	6963	6995	17683	17683					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.9807922244072	3	483.647671	1447.92118	0.73339	0.0003547	-1.9708	-0.00095319	-1.2375	-0.00059849	483.64658448701994	30.819	0.56097	32.634	32.325	32.886	1.8151					66	18	4	0	0	0	0.98969	2	12916	12916;12956		4.4062	3.9516	1	17468000	+		14947	8513	6963	6995	17684;17685	17684					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.9650146365166	2	724.967868	1447.92118	0.23911	0.00017335	-1.191	-0.00086346	-0.95193	-0.00069012	724.966102398085	30.819	0.55386	32.634	32.591	33.145	1.8151					27	18	4	0	0	0	1.0402	1	12924	12924		0	0	1	3397400	+		14948	8513	6963	6995	17686	17686					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6469604372978	3	483.647671	1447.92118	0.74599	0.0003608	-2.1779	-0.0010533	-1.4319	-0.00069254	483.64649418664004	31.202	0.40589	33.027	32.896	33.302	1.8246					36	13	4	0	0	0	1.0388	1	13046	13046		0.50596	0.051438	1	14180000	+		14949	8513	6963	6995	17687	17687					0.21513985064598273
KLPIERRKPRR	11	Unmodified	_KLPIERRKPRR_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9877502322197	4	362.987572	1447.92118	0.48914	0.00017755	-1.7945	-0.00065139	-1.3054	-0.00047384	362.9876474891707	31.174	1.2269	32.998	32.865	34.092	1.8246					99	44	3	0	0	0	1.0391	2	13154	13071;13154		0.40827	0.24894	1	335070000	+		14950	8513	6963	6995	17688;17689	17689					0.21513985064598273
KLPNFGFVVF	10	Unmodified	_KLPNFGFVVF_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3318969607353	2	584.331685	1166.64882	3.7539	0.0021935	-3.2887	-0.0019217	0.46516	0.00027181	584.3295775979726	81.914	0.27942	83.127	82.975	83.255	1.2125					18	8	3	0	0	0	0.78468	1	34406	34406		13.906	0	1	654230			14951	2852	6964	6996	17690	17690					0.07215783270748943
KLPNFGFVVF	10	Unmodified	_KLPNFGFVVF_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2;ENSG00000145907|ENST00000356245|G3BP1	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3339721560478	2	584.331685	1166.64882	3.4768	0.0020316	-1.2599	-0.00073617	2.2169	0.0012954	584.331137780376	81.432	0.27509	83.128	82.983	83.258	1.6959					18	8	3	0	0	0	0.65574	1	34146	34146		20.454	1.1966	1	869400			14952	2852	6964	6996	17691	17691					0.07215783270748943
KLPQAAAT	8	Unmodified	_KLPQAAAT_					0	0	0			REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	799.4695922732353	1	799.467229	798.459953	2.7266	0.0021798	-0.66748	-0.00053363	2.0591	0.0016462	799.4672980457732	107.71	0.16234	107.87	107.77	107.93	0.15781					18	8	3	0	0	0	0.89178	1	46386	46386		0.69038	0	1	142550000	+		14953	10372	6965	6997	17692	17692					0.05266130697259541
KLPQAAAT	8	Unmodified	_KLPQAAAT_					0	0	0			REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	799.467229	798.459953	1.2833	0.001026	2.1861	0.0017478	3.4695	0.0027737	799.4700550510041	107.76	0.13831	107.76	107.67	107.81	0	-0.060068	0.002014	NaN	0.69038	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9529000	+		14954	10372	6965	6997							0.05266130697259541
KLPQAAAT	8	Unmodified	_KLPQAAAT_					0	0	0			REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	799.467229	798.459953	2.7536	0.0022014	-0.27551	-0.00022026	2.478	0.0019811	799.4672307333337	107.73	0.12682	107.79	107.71	107.84	0.052452	-0.032037	4.6029E-05	NaN	0.69038	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12011000	+		14955	10372	6965	6997							0.05266130697259541
KLPQAAAT	8	Unmodified	_KLPQAAAT_					0	0	0			REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	799.467229	798.459953	2.7266	0.0021798	-0.66748	-0.00053363	2.0591	0.0016462	799.4672980457732	107.71	0.16234	107.87	107.77	107.93	0.15781	0.05477	-0.00026734	NaN	0.69038	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	142550000	+		14956	10372	6965	6997							0.05266130697259541
KLPQAAAT	8	Unmodified	_KLPQAAAT_					0	0	0			REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	REV__ENST00000530329.1_1_11:61112942-61113484:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	799.467229	798.459953	2.8884	0.0023092	-1.1301	-0.00090347	1.7583	0.0014057	799.4668687593663	107.7	0.14792	107.85	107.75	107.9	0.15795	0.037335	-0.00063718	NaN	0.69038	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	98950000	+		14957	10372	6965	6997							0.05266130697259541
KLPRLVQLVRL	11	Unmodified	_KLPRLVQLVRL_					0	0	0			REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4803039431572	4	334.48032	1333.89217	-2.5047	-0.00083777	-0.06068	-2.0296E-05	-2.5654	-0.00085806	334.48099796825176	22.889	1.7691	22.889	22.722	24.491	0					329	57	6	0	0	0	1.0391	1	9975	9975		0.40827	0	1	206940000	+		14958	8174	6966	6998	17693	17693					0.23858447715633702
KLPRLVQLVRL	11	Unmodified	_KLPRLVQLVRL_					0	0	0			REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4805480837822	4	334.48032	1333.89217	-2.3632	-0.00079045	-0.51662	-0.0001728	-2.8798	-0.00096325	334.48073959403655	26.214	1.7252	26.214	25.534	27.259	0					255	56	6	0	0	0	1.039	3	10911	10911;11236;11353		0.45452	0	1	123080000	+		14959	8174	6966	6998	17694;17695;17696	17694					0.23858447715633702
KLPRLVQLVRL	11	Unmodified	_KLPRLVQLVRL_					0	0	0			REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4803344607353	4	334.48032	1333.89217	-2.3175	-0.00077517	-0.51747	-0.00017308	-2.835	-0.00094825	334.4807408906752	27.546	2.2533	27.546	27.231	29.484	0					249	73	6	0	0	0	1.039	1	11561	11561		0.45452	0	1	182450000	+		14960	8174	6966	6998	17697	17697					0.23858447715633702
KLPRLVQLVRL	11	Unmodified	_KLPRLVQLVRL_					0	0	0			REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4808837771416	4	334.48032	1333.89217	0.25986	8.6918E-05	-3.3921	-0.0011346	-3.1323	-0.0010477	334.48065055399775	24.275	2.0568	24.517	23.73	25.787	0.24251					327	66	7	0	0	0	1.039	5	10107	10107;10156;10206;10323;10362		0.45452	0	1	444280000	+		14961	8174	6966	6998	17698;17699;17700;17701;17702	17698					0.23858447715633702
KLPRLVQLVRL	11	Unmodified	_KLPRLVQLVRL_					0	0	0			REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	REV__CACNA1A|p.R1348Q|1|0.52|ENSG00000141837|chr19:13262780-13262780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4804260134697	4	334.48032	1333.89217	-0.021052	-7.0415E-06	-3.4115	-0.0011411	-3.4326	-0.0011481	334.48055263633654	22.564	1.9819	24.214	23.552	25.533	1.6498					317	64	7	0	0	0	1.039	1	9420	9420		0.45452	0	1	559120000	+		14962	8174	6966	6998	17703	17703					0.23858447715633702
KLQEFLQTL	9	Unmodified	_KLQEFLQTL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-4|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3259765505791	2	560.324057	1118.63356	1.3809	0.00077374	2.2316	0.0012504	3.6124	0.0020241	560.3249139496626	56.832	0.40829	56.832	56.662	57.07	0					22	13	3	0	0	0	0.031145	1	23695	23695		85.642	19.185	1	8223100			14963	2922	6967	6999	17704	17704					0.07898871682891695
KLQEFLQTL	9	Unmodified	_KLQEFLQTL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-4|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3254272341728	2	560.324057	1118.63356	2.117	0.0011862	2.4135	0.0013523	4.5304	0.0025385	560.324569568659	56.334	0.42918	56.655	56.473	56.902	0.32103					26	14	3	0	0	0	8.9999E-05	2	23616	23569;23616		147.06	39.872	1	7940300			14964	2922	6967	6999	17705;17706	17706					0.07898871682891695
KLQEFLQTL	9	Unmodified	_KLQEFLQTL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-4|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3256103396416	2	560.324057	1118.63356	1.5381	0.00086186	0.8116	0.00045476	2.3497	0.0013166	560.3244620591387	55.107	0.516	56.512	56.272	56.788	1.4048					48	17	4	0	0	0	0.0006934	3	23063	23016;23063;23115		134.3	40.745	1	35491000			14965	2922	6967	6999	17707;17708;17709	17708					0.07898871682891695
KLQEFLQTL	9	Unmodified	_KLQEFLQTL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;ENST00000568670.5_1_15:89790878-89801939:+|nuORF;ENST00000570110.1_1_15:89790878-89802018:+|nuORF;nc|ENSG00000140525|Q9NVI1-4|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3249389529228	2	560.324057	1118.63356	1.4778	0.00082805	0.59936	0.00033583	2.0772	0.0011639	560.3242785898215	54.683	0.52144	56.651	56.379	56.9	1.9684					43	17	4	0	0	0	0.0006934	3	22892	22842;22892;22943		134.3	37.005	1	30414000			14966	2922	6967	6999	17710;17711;17712	17711					0.07898871682891695
KLQRQRGRA	9	Unmodified	_KLQRQRGRA_					0	0	0		ENST00000528793.5_1_5:176867950-176869060:+|nuORF	ENST00000528793.5_1_5:176867950-176869060:+|nuORF	ENST00000528793.5_1_5:176867950-176869060:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	372.1022216677666	3	371.563496	1111.66866	0.99478	0.00036962	2.2478	0.00083521	3.2426	0.0012048	371.5647478672346	42.12	0.22043	43.46	43.35	43.571	1.3399					10	6	2	0	0	0	0.11909	1	17659	17659		0.96228	0.61164	1	677500			14967	7149	6968	7000	17713	17713					0.11728972054083897
KLRFVKWF	8	Unmodified	_KLRFVKWF_					0	0	0		tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3437988162041	2	562.342387	1122.67022	1.2031	0.00067655	1.8112	0.0010185	3.0143	0.001695	562.3431565799003	70.004	1.3335	70.326	69.344	70.678	0.32224					80	42	3	0	0	0	0.89178	1	29169	29169		0.69038	0.16561	1	1666400			14968	16966	6969	7001	17714	17714					0.11379213090117446
KLRFVKWFMV	10	Unmodified	_KLRFVKWFMV_					0	0	0		tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	tr|A0A7D6VVN4|A0A7D6VVN4_9CLOTGlycogensynthaseOS=ClostridiumintestinaleOX=36845GN=glgAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9348937869072	3	451.933649	1352.77912	2.1825	0.00098634	-0.50575	-0.00022856	1.6768	0.00075778	451.93377716668147	84.549	1.375	85.708	85.118	86.493	1.159					84	45	3	0	0	0	0.89803	1	35547	35547		0.15932	0.01943	1	4016500			14969	16966	6970	7002	17715	17715					0.11684055998080112
KLRHKYKIILH	11	Unmodified	_KLRHKYKIILH_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|38|2|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|38|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9882995486259	4	362.98577	1447.91397	-0.4714	-0.00017111	3.6451	0.0013231	3.1737	0.001152	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.0365	1	13217	13217		1.2148	0.76031	1	563060000	+		14970	14249	6971	7003	17716	17716					0.2079325246420467
KLRKFIFK	8	Unmodified	_KLRKFIFK_					0	0	0		ENSG00000071575|ENST00000155926|TRIB2	ENSG00000071575|ENST00000155926|TRIB2	ENSG00000071575|ENST00000155926|TRIB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.0502502322197	3	360.57445	1078.70152	-1.7192	-0.00061992	2.6612	0.00095957	0.94198	0.00033965	360.57532748332096	22.65	0.38124	22.65	22.369	22.75	0					41	12	4	0	0	0	2.3239	1	9306	9306		0.40072	0	1	32277000			14971	872	6972	7004	17717	17717					0.16531786124232895
KLRKKWRMKKK	11	Unmodified	_KLRKKWRMKKK_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MSMS	GG20161007_CRH_Patient100_W632_01	3	765.3646728396416	2	765.50049	1528.98643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.47	1	100.65	100.15	101.15	0.18047								0	0	0	0.63775	1	42277	42277		0.30703	0.30703	1		+		14972	10112	6973	7005	17718	17718					0.24309263266104608
KLRKRKPEKK	10	Unmodified	_KLRKRKPEKK_					0	0	0		ENSG00000204619|ENST00000376772|PPP1R11	ENSG00000204619|ENST00000376772|PPP1R11	ENSG00000204619|ENST00000376772|PPP1R11	MSMS	GG20161007_CRH_Patient100_A02_01	1	655.9402953982353	2	655.940788	1309.86702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.4	1	11.4	10.9	11.9	0								0	0	0	0.66176	1	4709	4709		1.4819	0	1				14973	5155	6974	7006	17719	17719					0.2244839291304288
KLRLPDKCHK	10	Unmodified	_KLRLPDKCHK_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MSMS	GG20161007_CRH_Patient100_W632_01	3	619.3657104372978	2	619.363524	1236.7125	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.29	1	105.45	104.95	105.95	0.15859								0	0	0	0.6624	1	44812	44812		0.40072	0	1		+		14974	11532	6975	7007	17720	17720					0.10360820436176255
KLRLREFRRRL	11	Unmodified	_KLRLREFRRRL_					0	0	0			REV__nc|ENSG00000174740|Q96DU9-2|PABPC5	REV__nc|ENSG00000174740|Q96DU9-2|PABPC5	MSMS	GG20161007_CRH_Patient100_W632_02	4	772.3331176638603	2	771.994417	1541.97428	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.35	1	97.656	97.156	98.156	0.3062								0	0	0	0.63775	1	40951	40951		0.30703	0	1		+		14975	11132	6976	7008	17721	17721					0.22497362847298064
KLRQERKRPLL	11	Unmodified	_KLRQERKRPLL_					0	0	0		nc|ENSG00000003402|O15519-4|CFLAR;nc|ENSG00000003402|O15519-15|CFLAR;nc|ENSG00000003402|O15519-6|CFLAR;nc|ENSG00000003402|O15519-8|CFLAR;nc|ENSG00000003402|O15519-5|CFLAR;ENSG00000003402|ENST00000309955|CFLAR	nc|ENSG00000003402|O15519-4|CFLAR	nc|ENSG00000003402|O15519-4|CFLAR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.7337524294853	4	359.984764	1435.90995	-1.3344	-0.00048036	1.1835	0.00042603	-0.15093	-5.4332E-05	359.98512120146313	31.645	0.93782	31.645	31.473	32.411	0					43	29	2	0	0	0	0.14606	1	13373	13373		0.50596	0.051438	1	7878600			14976	466	6977	7009	17722	17722					0.20943162970502271
KLRQERKRPLL	11	Unmodified	_KLRQERKRPLL_					0	0	0		nc|ENSG00000003402|O15519-4|CFLAR;nc|ENSG00000003402|O15519-15|CFLAR;nc|ENSG00000003402|O15519-6|CFLAR;nc|ENSG00000003402|O15519-8|CFLAR;nc|ENSG00000003402|O15519-5|CFLAR;ENSG00000003402|ENST00000309955|CFLAR	nc|ENSG00000003402|O15519-4|CFLAR	nc|ENSG00000003402|O15519-4|CFLAR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	359.7342712283134	4	359.984764	1435.90995	-0.28735	-0.00010344	-0.3341	-0.00012027	-0.62145	-0.00022371	359.9844879230411	29.221	0.54403	30.504	30.312	30.856	1.2825					37	17	3	0	0	0	0.14606	1	12360	12360		0.50596	0.09769	1	3724800			14977	466	6977	7009	17723	17723					0.20943162970502271
KLRRYVAKKLK	11	Unmodified	_KLRRYVAKKLK_					0	0	0		ENSG00000108592|ENST00000427159|FTSJ3	ENSG00000108592|ENST00000427159|FTSJ3	ENSG00000108592|ENST00000427159|FTSJ3	MSMS	GG20161007_CRH_Patient100_A02_02	2	701.9717285037041	2	701.972088	1401.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.667	1	44.994	44.494	45.494	0.32674								0	0	0	0.63775	1	18757	18757		0.30703	0	1				14978	1640	6978	7010	17724	17724					0.24473538981214915
KLRVRHQKSL	10	Unmodified	_KLRVRHQKSL_					0	0	0		ENST00000462977.1_1_1:161139323-161139551:+|nuORF	ENST00000462977.1_1_1:161139323-161139551:+|nuORF	ENST00000462977.1_1_1:161139323-161139551:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2721130251884	3	422.270201	1263.78877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.81	1	88.81	88.31	89.31	0								0	0	0	0.66218	1	37128	37128		0.77653	0	1				14979	6681	6979	7011	17725	17725					0.16742960327837864
KLRVRRPPTP	10	Unmodified	_KLRVRRPPTP_					0	0	0			REV__nc|ENSG00000128604|Q13568-5|IRF5	REV__nc|ENSG00000128604|Q13568-5|IRF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	610.3930541872978	2	610.390931	1218.76731	1.5577	0.00095079	1.8121	0.0011061	3.3698	0.0020569	610.3921563543018	105.99	0.13783	105.99	105.91	106.05	0					20	6	4	0	0	0	0.89803	1	45110	45110		1.4819	1.0812	1	130840000	+		14980	9734	6980	7012	17726	17726					0.16667575299129567
KLSALKPHL	9	Unmodified	_KLSALKPHL_					0	0	0		tr|A0A553SML7|A0A553SML7_NIACIUDP-N-acetylglucosamine--LPSN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=CEQ21_22850PE=3SV=1	tr|A0A553SML7|A0A553SML7_NIACIUDP-N-acetylglucosamine--LPSN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=CEQ21_22850PE=3SV=1	tr|A0A553SML7|A0A553SML7_NIACIUDP-N-acetylglucosamine--LPSN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=CEQ21_22850PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	503.8217651247978	2	503.824027	1005.6335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.673	1	59.091	58.591	59.591	1.4181								0	0	0	0.33839	1	24180	24180		14.838	1.3304	1				14981	16379	6981	7013	17727	17727					0.13090916473549896
KLSELEAAL	9	Unmodified	_KLSELEAAL_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2829162478447	2	487.281857	972.549162	2.5025	0.0012194	-0.9457	-0.00046082	1.5568	0.00075862	487.281552794537	41.974	0.53577	42.295	41.917	42.452	0.32058					31	17	3	0	0	0	0.15456	1	17623	17623		38.176	5.8701	1	1914600		+	14982	343	6982	7014	17728	17728					0.061789208661252815
KLSELEAAL	9	Unmodified	_KLSELEAAL_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2820312380791	2	487.281857	972.549162	2.3984	0.0011687	-1.1677	-0.00056901	1.2307	0.00059969	487.28119586766155	40.335	0.49294	41.645	41.421	41.914	1.3102					39	15	4	0	0	0	0.026734	2	16946	16899;16946		92.653	6.6559	1	10433000		+	14983	343	6982	7014	17729;17730	17730					0.061789208661252815
KLSELEAAL	9	Unmodified	_KLSELEAAL_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2827331423759	2	487.281857	972.549162	1.8362	0.00089474	-0.088019	-4.289E-05	1.7482	0.00085185	487.2817408132448	39.89	0.49741	41.752	41.521	42.019	1.8624					52	15	5	0	0	0	0.040497	1	16767	16767		75.761	0.83183	1	11494000		+	14984	343	6982	7014	17731	17731					0.061789208661252815
KLSFFSSVLL	10	Unmodified	_KLSFFSSVLL_					0	0	0			REV__tr|A0A553STB0|A0A553STB0_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04630PE=3SV=1	REV__tr|A0A553STB0|A0A553STB0_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8383056521416	2	570.8368	1139.65905	2.298	0.0013118	-0.073725	-4.2085E-05	2.2243	0.0012697	570.8365791269177	41.335	0.41297	42.661	42.462	42.875	1.3254					30	12	3	0	0	0	0.49886	1	17308	17308		27.629	0	1	1755900	+		14985	15235	6983	7015	17732	17732					0.09480346205350543
KLSLVAAML	9	Unmodified	_KLSLVAAML_					0	0	0		ENSG00000044574|ENST00000324460|HSPA5	ENSG00000044574|ENST00000324460|HSPA5	ENSG00000044574|ENST00000324460|HSPA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2945434451103	2	473.293714	944.572874	2.6198	0.0012399	-0.56842	-0.00026903	2.0513	0.00097088	473.2942974969655	63.076	0.34541	63.076	62.895	63.24	0					24	10	3	0	0	0	0.50272	1	26285	26285		15.248	0.41021	1	974250			14986	672	6984	7016	17733	17733					0.09837063098962062
KLSSLIILM	9	Unmodified	_KLSSLIILM_					0	0	0		ENSG00000149257|ENST00000358171|SERPINH1;ENST00000419794.1_1_9:34318953-34319253:+|nuORF	ENSG00000149257|ENST00000358171|SERPINH1	ENSG00000149257|ENST00000358171|SERPINH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3238098025322	2	509.322471	1016.63039	2.2575	0.0011498	0.56105	0.00028575	2.8185	0.0014355	509.3229050537749	69.383	0.94395	71.236	70.92	71.864	1.853					81	29	5	0	0	0	0.040497	1	29092	29092		75.761	5.0453	1	37004000			14987	3235	6985	7017	17734	17734					0.12273905304550681
KLSWDLIYL	9	Unmodified	_KLSWDLIYL_					0	0	0		FPGS-CERCAM|2|fusion;FPGS-CERCAM|1|fusion;nc|ENSG00000167123|Q5T4B2-2|CERCAM;ENSG00000167123|ENST00000372838|CERCAM	FPGS-CERCAM|2|fusion	FPGS-CERCAM|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8315917849541	2	575.828975	1149.6434	1.6066	0.00092512	1.9917	0.0011469	3.5982	0.002072	575.830095140626	79.524	0.42879	81.241	81.015	81.444	1.7167					35	13	4	0	0	0	0.086433	1	33384	33384		53.833	7.8118	1	3529700			14988	3950	6986	7018	17735	17735					0.07456059688274763
KLTGILQEV	9	Unmodified	_KLTGILQEV_					0	0	0		ENSG00000129250|ENST00000320785|KIF1C	ENSG00000129250|ENST00000320785|KIF1C	ENSG00000129250|ENST00000320785|KIF1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8074218630791	2	500.8055	999.596446	1.9062	0.00095461	0.83508	0.00041821	2.7412	0.0013728	500.8063319310613	45.839	0.31128	47.214	47.023	47.334	1.3751					15	9	2	0	0	0	0.043696	1	19184	19184		72.968	19.135	1	1533400			14989	2398	6987	7019	17736	17736					0.09663200137140393
KLTGILQEV	9	Unmodified	_KLTGILQEV_					0	0	0		ENSG00000129250|ENST00000320785|KIF1C	ENSG00000129250|ENST00000320785|KIF1C	ENSG00000129250|ENST00000320785|KIF1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8080322146416	2	500.8055	999.596446	1.4056	0.00070392	0.35859	0.00017959	1.7642	0.00088351	500.8063901414671	45.299	0.31307	47.259	47.083	47.396	1.9596					21	9	3	0	0	0	0.11669	1	18961	18961		43.772	5.7984	1	1443400			14990	2398	6987	7019	17737	17737					0.09663200137140393
KLTRGGVSV	9	Unmodified	_KLTRGGVSV_					0	0	0			REV__tr|A0A553SMG8|A0A553SMG8_NIACILysMpeptidoglycan-bindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22455PE=3SV=1	REV__tr|A0A553SMG8|A0A553SMG8_NIACILysMpeptidoglycan-bindingdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22455PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1915161013603	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.621	1	79.888	79.388	80.388	1.2668								0	0	0	0.42693	1	33003	33003		0.26902	0	1		+		14991	15019	6988	7020	17738	17738					0.08901180025725353
KLTRQEKLK	9	Unmodified	_KLTRQEKLK_					0	0	0		CLASRP|p.P574R|1|0.85|ENSG00000104859|chr19:45068433-45068433|C/G|missense_variant	CLASRP|p.P574R|1|0.85|ENSG00000104859|chr19:45068433-45068433|C/G|missense_variant	CLASRP|p.P574R|1|0.85|ENSG00000104859|chr19:45068433-45068433|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	382.5850707888603	3	381.91179	1142.71354	0.43115	0.00016466	-4.4497	-0.0016994	-4.0185	-0.0015347	382.2436572506132	51.5	0.65214	53.475	53.367	54.02	1.9753					24	20	2	0	0	0	0.11553	1	21706	21706		8.9762	0	1	1367700			14992	310	6989	7021	17739	17739					0.14789358076723147
KLVCYFTNW	9	Unmodified	_KLVCYFTNW_					0	0	0		OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant;OVGP1|p.K271Qfs*4|1|0.41|ENSG00000085465|chr1:111421369-111421370|-/A|frameshift_variant;ENSG00000085465|ENST00000369732|OVGP1;ENST00000530597.1_1_1:111772478-111773566:+|nuORF;ENST00000526684.1_1_1:111772478-111773917:+|nuORF;nc|ENSG00000064886|Q15782-6|CHI3L2;ENSG00000064886|ENST00000369748|CHI3L2;nc|ENSG00000133063|Q13231-2|CHIT1;nc|ENSG00000133063|Q13231-3|CHIT1;nc|ENSG00000133063|Q13231-4|CHIT1;ENSG00000133063|ENST00000367229|CHIT1	OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant;nc|ENSG00000133063|Q13231-2|CHIT1	nc|ENSG00000133063|Q13231-2|CHIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.2935058474541	2	587.291702	1172.56885	1.0754	0.00063157	3.5857	0.0021058	4.6611	0.0027374	587.2936323368824	56.328	0.33836	58.296	58.087	58.425	1.9684					18	10	2	0	0	0	0.53525	1	23598	23598		13.906	0.29118	1	3979900			14993	1061;2558	6990	7022	17740	17740					-0.010530263947430285
KLVDFVIHF	9	Unmodified	_KLVDFVIHF_					0	0	0		ENST00000440787.5_1_3:9845376-9847896:+|nuORF;nc|ENSG00000241553|P59998-4|ARPC4;ENSG00000241553|ENST00000397261|ARPC4;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3254272341728	2	559.32386	1116.63317	2.8108	0.0015721	-0.7225	-0.00040411	2.0883	0.001168	559.3238876839067	65.415	0.64394	66.814	66.54	67.184	1.3989					58	20	4	0	0	0	3.3414E-05	2	27463	27411;27463		160.52	112.17	1	5540400			14994	5339	6991	7023	17741;17742	17742					0.07951496753685205
KLVDFVIHF	9	Unmodified	_KLVDFVIHF_					0	0	0		ENST00000440787.5_1_3:9845376-9847896:+|nuORF;nc|ENSG00000241553|P59998-4|ARPC4;ENSG00000241553|ENST00000397261|ARPC4;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	373.2190429568291	3	373.218332	1116.63317	1.8661	0.00069646	-1.5609	-0.00058256	0.30516	0.00011389	373.21812524609277	65.409	0.49165	66.808	66.632	67.124	1.3989					48	15	4	0	0	0	0.30098	1	27426	27426		18.373	11.743	1	2886400			14995	5339	6991	7023	17743	17743					0.07951496753685205
KLVDFVIHF	9	Unmodified	_KLVDFVIHF_					0	0	0		ENST00000440787.5_1_3:9845376-9847896:+|nuORF;nc|ENSG00000241553|P59998-4|ARPC4;ENSG00000241553|ENST00000397261|ARPC4;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3249389529228	2	559.32386	1116.63317	1.8123	0.0010137	0.21833	0.00012212	2.0306	0.0011358	559.3240408596417	64.984	0.6847	66.893	66.564	67.248	1.9085					67	21	4	0	0	0	0.0017491	2	27261	27214;27261		131.27	86.861	1	5377600			14996	5339	6991	7023	17744;17745	17745					0.07951496753685205
KLVDFVIHF	9	Unmodified	_KLVDFVIHF_					0	0	0		ENST00000440787.5_1_3:9845376-9847896:+|nuORF;nc|ENSG00000241553|P59998-4|ARPC4;ENSG00000241553|ENST00000397261|ARPC4;ENST00000467289.5_1_3:9834805-9845712:+|nuORF;nc|ENSG00000241553|P59998-3|ARPC4	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	ENST00000440787.5_1_3:9845376-9847896:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	373.218332	1116.63317	1.5356	0.00057311	-0.52529	-0.00019605	1.0103	0.00037706	373.2181836231854	64.975	0.65387	66.883	66.658	67.312	1.9085	0.037665	0.00048443	NaN	18.373	41	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2277100			14997	5339	6991	7023							0.07951496753685205
KLVEFDFLGA	10	Unmodified	_KLVEFDFLGA_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.8104125857353	2	569.810782	1137.60701	1.3857	0.00078957	-0.38798	-0.00022108	0.9977	0.0005685	569.8105858496508	71.368	0.31546	71.368	71.194	71.509	0					17	9	2	0	0	0	0.60754	1	29705	29705		22.658	5.5452	1	1073700			14998	590	6992	7024	17746	17746					0.04371182791555839
KLVEFDFLGA	10	Unmodified	_KLVEFDFLGA_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.8105956912041	2	569.810782	1137.60701	1.2942	0.00073745	-1.0437	-0.00059469	0.25054	0.00014276	569.8104882525554	70.775	0.31503	71.099	70.924	71.239	0.32359					21	9	3	0	0	0	0.6796	2	29660	29607;29660		19.362	1.4208	1	1510500			14999	590	6992	7024	17747;17748	17748					0.04371182791555839
KLVEFDFLGA	10	Unmodified	_KLVEFDFLGA_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8124877810478	2	569.810782	1137.60701	2.3753	0.0013535	0.79918	0.00045538	3.1745	0.0018089	569.8112945987739	69.586	0.45846	70.952	70.701	71.159	1.3657					42	14	4	0	0	0	0.049285	1	29212	29212		86.332	26.258	1	7488400			15000	590	6992	7024	17749	17749					0.04371182791555839
KLVEFDFLGA	10	Unmodified	_KLVEFDFLGA_					0	0	0		ENST00000484651.5_1_4:1725148-1739714:+|nuORF;ENSG00000013810|ENST00000313288|TACC3	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	ENST00000484651.5_1_4:1725148-1739714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8116943240166	2	569.810782	1137.60701	1.3063	0.00074433	0.81976	0.00046711	2.126	0.0012114	569.8114712714095	69.03	0.54813	70.883	70.588	71.136	1.853					36	17	3	0	0	0	0.078293	2	28996	28947;28996		67.838	22.098	1	6442500			15001	590	6992	7024	17750;17751	17751					0.04371182791555839
KLVELPYTV	9	Unmodified	_KLVELPYTV_					0	0	0		ENST00000556124.3_1_14:20916255-20917133:-|nuORF;ENST00000555656.5_1_14:20915401-20917107:-|nuORF;ENSG00000092094|ENST00000206542|OSGEP	ENST00000556124.3_1_14:20916255-20917133:-|nuORF	ENST00000556124.3_1_14:20916255-20917133:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3162719607353	2	531.3157	1060.61685	0.72186	0.00038354	0.68173	0.00036221	1.4036	0.00074575	531.3154718851874	51.317	0.30576	52.711	52.498	52.804	1.3938					20	9	3	0	0	0	0.02878	1	21485	21485		89.401	21.32	1	3309100			15002	1158	6993	7025	17752	17752					0.08896370796924202
KLVELPYTV	9	Unmodified	_KLVELPYTV_					0	0	0		ENST00000556124.3_1_14:20916255-20917133:-|nuORF;ENST00000555656.5_1_14:20915401-20917107:-|nuORF;ENSG00000092094|ENST00000206542|OSGEP	ENST00000556124.3_1_14:20916255-20917133:-|nuORF	ENST00000556124.3_1_14:20916255-20917133:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	531.3157	1060.61685	0.49423	0.00026259	1.8596	0.00098803	2.3538	0.0012506	531.3166590499994	50.706	0.27313	52.682	52.515	52.788	1.9753	-0.014602	0.00023583	NaN	89.401	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3744100			15003	1158	6993	7025							0.08896370796924202
KLVNILVQL	9	Unmodified	_KLVNILVQL_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3502685427666	2	520.347335	1038.68012	2.0748	0.0010796	3.336	0.0017359	5.4108	0.0028155	520.3495994097639	66.469	0.339	67.858	67.657	67.996	1.3888					27	10	3	0	0	0	0.066815	2	27914	27867;27914		61.357	15.337	1	2930500			15004	1934	6994	7026	17753;17754	17754					0.16232356304840323
KLVNILVQL	9	Unmodified	_KLVNILVQL_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	520.347335	1038.68012	1.7578	0.00091465	4.801	0.0024982	6.5587	0.0034128	520.3506654025833	65.967	0.33849	67.875	67.706	68.045	1.9085	0.0085513	0.00090474	NaN	61.357	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2702200			15005	1934	6994	7026							0.16232356304840323
KLVSRKTRAR	10	Unmodified	_KLVSRKTRAR_					0	0	0			REV__ENST00000566044.5_1_16:47495210-47497806:+|nuORF	REV__ENST00000566044.5_1_16:47495210-47497806:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5985900759697	3	405.598317	1213.77312	2.7762	0.001126	-2.0238	-0.00082084	0.75241	0.00030517	405.59753741639327	90.363	0.46541	90.572	90.307	90.772	0.20904					42	14	4	0	0	0	0.89803	1	37853	37853		0.62683	0.62683	1	8078400	+		15006	13938	6995	7027	17755	17755					0.17478673810774126
KLVSRKTRAR	10	Unmodified	_KLVSRKTRAR_					0	0	0			REV__ENST00000566044.5_1_16:47495210-47497806:+|nuORF	REV__ENST00000566044.5_1_16:47495210-47497806:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5999938845634	3	405.598317	1213.77312	4.7377	0.0019216	-1.567	-0.00063556	3.1707	0.001286	405.5976490483664	89.67	0.49698	90.69	90.461	90.958	1.0199					34	15	4	0	0	0	0.89803	1	37825	37825		0.62683	0	1	2761600	+		15007	13938	6995	7027	17756	17756					0.17478673810774126
KLWDIINVNI	10	Unmodified	_KLWDIINVNI_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.3594238162041	2	614.358431	1226.70231	2.2014	0.0013524	0.48126	0.00029566	2.6826	0.0016481	614.3593584123734	80.428	0.34714	80.428	80.257	80.604	0					19	10	3	0	0	0	0.48044	1	33488	33488		28.495	11.382	1	985250			15008	1419	6996	7028	17757	17757					0.09802535982635163
KLWDIINVNI	10	Unmodified	_KLWDIINVNI_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3618041872978	2	614.358431	1226.70231	1.7293	0.0010624	1.8086	0.0011111	3.5379	0.0021735	614.3599121718148	79.858	0.41232	80.158	79.972	80.385	0.30046					26	12	3	0	0	0	0.50772	2	33367	33367;33427		27.223	9.7806	1	711750			15009	1419	6996	7028	17758;17759	17758					0.09802535982635163
KLWDIINVNI	10	Unmodified	_KLWDIINVNI_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.3602172732353	2	614.358431	1226.70231	2.6228	0.0016113	1.0411	0.0006396	3.6639	0.0022509	614.3588741549377	78.95	0.50067	80.216	80.003	80.504	1.2668					44	15	4	0	0	0	0.0641	2	33155	33106;33155		100.09	40.017	1	5392500			15010	1419	6996	7028	17760;17761	17761					0.09802535982635163
KLWDIINVNI	10	Unmodified	_KLWDIINVNI_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3606445193291	2	614.358431	1226.70231	2.1562	0.0013247	0.72783	0.00044715	2.884	0.0017718	614.3585893781591	78.52	0.46568	80.255	79.978	80.444	1.735					40	14	4	0	0	0	0.0641	2	32881	32881;32931		128.93	68.859	1	5052800			15011	1419	6996	7028	17762;17763	17762					0.09802535982635163
KLWDISEVMV	10	Unmodified	_KLWDISEVMV_					0	0	0		ENST00000468071.1_1_2:18736459-18741913:-|nuORF;ENSG00000240857|ENST00000381249|RDH14	ENST00000468071.1_1_2:18736459-18741913:-|nuORF	ENST00000468071.1_1_2:18736459-18741913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.3246337771416	2	610.323199	1218.63185	2.5725	0.0015701	1.0164	0.00062031	3.5889	0.0021904	610.3244839911538	71.064	0.27086	72.405	72.241	72.512	1.3415					14	8	2	0	0	0	0.2264	1	29805	29805		45.74	18.856	1	1778900			15012	5335	6997	7029	17764	17764					0.031274946026314865
KLWEFFQVDV	10	Unmodified	_KLWEFFQVDV_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL;AGL|p.K422Tfs*12|1|0.04|ENSG00000162688|chr1:99875436-99875437|-/CTCCTGAGGTTAGAATATTTGGT|frameshift_variant	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	655.3841430544853	2	655.842613	1309.67067	1.3346	0.00087527	-3.265	-0.0021413	-1.9304	-0.0012661	656.3427122372063	79.825	0.43645	81.542	81.321	81.758	1.7167					25	13	3	0	0	0	0.12495	1	33555	33555		7.609	2.7119	1	1400500			15013	3639	6998	7030	17765	17765					0.02822543228626273
KLWEMDNMLI	10	Unmodified	_KLWEMDNMLI_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	646.8239623904228	2	646.822509	1291.63047	2.292	0.0014825	-0.19439	-0.00012574	2.0976	0.0013568	646.8227369964588	73.739	0.41565	74.064	73.881	74.296	0.32494					28	12	3	0	0	0	0.72878	1	30842	30842		17.113	0	1	895410			15014	4499	6999	7031	17766	17766					-0.0036846275777406845
KLWEMDNMLI	10	Unmodified	_KLWEMDNMLI_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	646.8248779177666	2	646.822509	1291.63047	2.8427	0.0018387	-0.35387	-0.00022889	2.4888	0.0016098	646.8225410737339	72.654	0.61885	73.984	73.762	74.381	1.3297					55	19	4	0	0	0	0.062288	3	30512	30464;30512;30560		96.367	36.293	1	9613300			15015	4499	6999	7031	17767;17768;17769	17768					-0.0036846275777406845
KLWEMDNMLI	10	Unmodified	_KLWEMDNMLI_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8248168826103	2	646.822509	1291.63047	2.6724	0.0017286	-0.636	-0.00041138	2.0364	0.0013172	646.8223659835153	72.175	0.67459	73.985	73.742	74.416	1.8101					59	21	4	0	0	0	0.049285	3	30239	30239;30289;30334		86.332	38.583	1	8413100			15016	4499	6999	7031	17770;17771;17772	17770					-0.0036846275777406845
KLWEMDNMLI	10	Unmodified	_KLWEMDNMLI_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	646.822509	1291.63047	2.0972	0.0013565	0.02096	1.3557E-05	2.1181	0.0013701	646.8224995011337	74.299	0.38393	74.299	74.11	74.494	0	0.21613	0.00042767	NaN	86.332	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629950			15017	4499	6999	7031							-0.0036846275777406845
KLWEMDNMLI	10	Oxidation (M)	_KLWEMDNM(Oxidation (M))LI_		KLWEM(0.002)DNM(0.998)LI		KLWEM(-26)DNM(26)LI	0	0	1		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.8229858279228	2	654.819966	1307.62538	2.9501	0.0019318	0.38404	0.00025148	3.3342	0.0021833	654.8205561466516	60.579	0.34232	61.999	61.841	62.184	1.4196					30	10	4	0	0	0	0.14781	1	25398	25398		55.503	26.421	2	2565900			15018	4499	6999	7032	17773	17773		75			-0.016127666204056368
KLWEMDNMLI	10	Oxidation (M)	_KLWEMDNM(Oxidation (M))LI_		KLWEMDNM(1)LI		KLWEM(-35)DNM(35)LI	0	0	1		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.8234130740166	2	654.819966	1307.62538	3.1112	0.0020373	0.54204	0.00035494	3.6532	0.0023922	654.8207076714995	60.071	0.31518	62.036	61.883	62.199	1.9653					24	9	3	0	0	0	0.078293	1	25202	25202		67.838	35.052	2	2987100			15019	4499	6999	7032	17774	17774		75			-0.016127666204056368
KLWEMDNMLI	10	Oxidation (M)	_KLWEMDNM(Oxidation (M))LI_					0	0	1		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	654.819966	1307.62538	1.9007	0.0012446	3.6599	0.0023966	5.5606	0.0036412	654.8217997066237	61.715	0.21619	62.045	61.981	62.197	0.32974	0.01816	0.0038763	NaN	67.838	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306980			15020	4499	6999	7032				75			-0.016127666204056368
KLWEMVREAE	10	Unmodified	_KLWEMVREAE_					0	0	0			REV__ENSG00000163161|ENST00000285398|ERCC3	REV__ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.793	1	10.876	10.376	11.376	0.082325								0	0	0	0.66255	1	4478	4478		0.13989	0	1		+		15021	10674	7000	7033	17775	17775					0.010571113458354375
KLWESPNVL	9	Unmodified	_KLWESPNVL_					0	0	0		nc|ENSG00000100360|Q9BW83-2|IFT27;ENSG00000100360|ENST00000433985|IFT27;ENST00000471809.5_1_22:37159849-37172159:-|nuORF	nc|ENSG00000100360|Q9BW83-2|IFT27	nc|ENSG00000100360|Q9BW83-2|IFT27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3046752810478	2	543.303124	1084.5917	1.8275	0.0009929	0.4462	0.00024242	2.2737	0.0012353	543.303534565293	46.645	0.37865	48.02	47.832	48.211	1.3751					29	11	3	0	0	0	0.033504	2	19524	19524;19579		81.89	31.957	1	1862300			15022	1269	7001	7034	17776;17777	17776					0.05278315994382865
KLWESPNVL	9	Unmodified	_KLWESPNVL_					0	0	0		nc|ENSG00000100360|Q9BW83-2|IFT27;ENSG00000100360|ENST00000433985|IFT27;ENST00000471809.5_1_22:37159849-37172159:-|nuORF	nc|ENSG00000100360|Q9BW83-2|IFT27	nc|ENSG00000100360|Q9BW83-2|IFT27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3047973513603	2	543.303124	1084.5917	1.4246	0.00077401	0.51162	0.00027797	1.9363	0.001052	543.303902206099	46.193	0.4036	48.163	47.943	48.347	1.9703					28	12	3	0	0	0	0.086433	2	19377	19326;19377		53.833	19.431	1	1601300			15023	1269	7001	7034	17778;17779	17779					0.05278315994382865
KLWMRKYLLHY	11	Unmodified	_KLWMRKYLLHY_					0	0	0			REV__ENST00000508970.1_1_2:79924974-80004158:+|nuORF	REV__ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6282226443291	3	517.626997	1549.85916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.12	1	112.17	111.67	112.67	0.04554								0	0	0	0.63775	1	48332	48332		0.45452	0.046251	1		+		15024	13558	7002	7035	17780	17780					0.10622497601275427
KLWMRKYLLHY	11	Unmodified	_KLWMRKYLLHY_					0	0	0			REV__ENST00000508970.1_1_2:79924974-80004158:+|nuORF	REV__ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6277343630791	3	517.626997	1549.85916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.18	1	113.23	112.73	113.73	0.044189								0	0	0	0.63775	1	48758	48758		0.50596	0	1		+		15025	13558	7002	7035	17781	17781					0.10622497601275427
KLWNDAVIV	9	Unmodified	_KLWNDAVIV_					0	0	0		ENSG00000052841|ENST00000039989|TTC17;ENST00000529140.1_1_11:43511716-43515451:+|nuORF	ENSG00000052841|ENST00000039989|TTC17	ENSG00000052841|ENST00000039989|TTC17	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3067504763603	2	529.305667	1056.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.142	1	52.536	52.036	53.036	1.3938								0	0	0	0.10042	1	21413	21413		34.402	1.616	1				15026	706	7003	7036	17782	17782					0.07074619856962272
KLWSETFDV	9	Unmodified	_KLWSETFDV_					0	0	0		ENSG00000163947|ENST00000296315|ARHGEF3;nc|ENSG00000163947|Q9NR81-3|ARHGEF3;nc|ENSG00000163947|Q9NR81-2|ARHGEF3	ENSG00000163947|ENST00000296315|ARHGEF3	ENSG00000163947|ENST00000296315|ARHGEF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.7852661013603	2	562.784764	1123.55498	1.228	0.00069113	-1.2176	-0.00068526	0.010432	5.871E-06	562.7841191658184	53.683	0.27662	55.083	54.948	55.225	1.4005					18	10	2	0	0	0	0.099302	1	22491	22491		49.554	13.427	1	4029500			15027	3737	7004	7037	17783	17783					-0.0018598062220007705
KLWSETFDV	9	Unmodified	_KLWSETFDV_					0	0	0		ENSG00000163947|ENST00000296315|ARHGEF3;nc|ENSG00000163947|Q9NR81-3|ARHGEF3;nc|ENSG00000163947|Q9NR81-2|ARHGEF3	ENSG00000163947|ENST00000296315|ARHGEF3	ENSG00000163947|ENST00000296315|ARHGEF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.7836791872978	2	562.784764	1123.55498	0.72168	0.00040615	-0.9829	-0.00055316	-0.26122	-0.00014701	562.7839554442302	53.144	0.2673	55.114	54.997	55.264	1.9697					16	12	2	0	0	0	0.053939	1	22290	22290		66.457	22.598	1	3146300			15028	3737	7004	7037	17784	17784					-0.0018598062220007705
KLWTSLVNL	9	Unmodified	_KLWTSLVNL_					0	0	0		ENST00000504224.5_3_4:2498845-2502421:+|nuORF;ENST00000513643.5_1_4:2492220-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.3211547732353	2	537.321317	1072.62808	1.5807	0.00084932	-0.57043	-0.00030651	1.0102	0.00054282	537.3207500333527	67.457	0.43556	67.457	67.26	67.695	0					27	13	3	0	0	0	0.23535	1	28130	28130		29.082	7.3349	1	1270100			15029	6996	7005	7038	17785	17785					0.09467192891088416
KLWTSLVNL	9	Unmodified	_KLWTSLVNL_					0	0	0		ENST00000504224.5_3_4:2498845-2502421:+|nuORF;ENST00000513643.5_1_4:2492220-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.3223754763603	2	537.321317	1072.62808	1.9029	0.0010225	0.54164	0.00029104	2.4445	0.0013135	537.3214247163183	66.904	0.3408	67.228	67.001	67.341	0.32449					22	10	3	0	0	0	0.043696	1	27990	27990		72.968	27.268	1	1874100			15030	6996	7005	7038	17786	17786					0.09467192891088416
KLWTSLVNL	9	Unmodified	_KLWTSLVNL_					0	0	0		ENST00000504224.5_3_4:2498845-2502421:+|nuORF;ENST00000513643.5_1_4:2492220-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3236572146416	2	537.321317	1072.62808	2.7058	0.0014539	1.4703	0.00079	4.176	0.0022439	537.3220966868739	65.606	0.55179	67.005	66.788	67.34	1.3989					37	17	3	0	0	0	0.075994	1	27487	27487		57.722	13.95	1	4623400			15031	6996	7005	7038	17787	17787					0.09467192891088416
KLWTSLVNL	9	Unmodified	_KLWTSLVNL_					0	0	0		ENST00000504224.5_3_4:2498845-2502421:+|nuORF;ENST00000513643.5_1_4:2492220-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	ENST00000504224.5_3_4:2498845-2502421:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3231078982353	2	537.321317	1072.62808	1.9762	0.0010619	2.3072	0.0012397	4.2834	0.0023016	537.3224991383291	65.156	0.43394	67.064	66.815	67.248	1.9085					30	13	3	0	0	0	0.043696	1	27296	27296		72.968	15.246	1	3810800			15032	6996	7005	7038	17788	17788					0.09467192891088416
KLYATSNNKRS	11	Unmodified	_KLYATSNNKRS_					0	0	0			REV__MUC15|p.S197Lfs*27|1|0.04|ENSG00000169550|chr11:26565270-26565271|-/TGGAGGAAAACAA|frameshift_variant	REV__MUC15|p.S197Lfs*27|1|0.04|ENSG00000169550|chr11:26565270-26565271|-/TGGAGGAAAACAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3522216677666	2	641.349126	1280.6837	1.955	0.0012538	-0.61836	-0.00039658	1.3367	0.00085726	641.3493859953809	76.736	0.77209	78.503	78.19	78.962	1.7672					76	23	5	0	0	0	0.6971	1	32348	32348		18.373	1.4308	1	20751000	+		15033	14368	7006	7039	17789	17789					0.05458374340719274
KLYDGFQYL	9	Unmodified	_KLYDGFQYL_					0	0	0		nc|ENSG00000143393|Q9UBF8-3|PI4KB;nc|ENSG00000143393|Q9UBF8-2|PI4KB;ENSG00000143393|ENST00000368873|PI4KB	nc|ENSG00000143393|Q9UBF8-3|PI4KB	nc|ENSG00000143393|Q9UBF8-3|PI4KB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.7958251833916	2	573.795132	1145.57571	2.0064	0.0011512	0.79354	0.00045533	2.7999	0.0016066	573.7949110004755	55.773	0.23768	56.093	55.957	56.195	0.32088					9	7	2	0	0	0	0.6486	1	23359	23359		9.3831	2.66	1	893690			15034	3029	7007	7040	17790	17790					0.008746097574885425
KLYEKKKLIG	10	Unmodified	_KLYEKKKLIG_					0	0	0			REV__tr|A0A7D7A147|A0A7D7A147_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13890PE=4SV=1	REV__tr|A0A7D7A147|A0A7D7A147_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13890PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.3941528201103	2	610.392273	1218.76999	3.2047	0.0019561	0.15605	9.5252E-05	3.3607	0.0020514	610.3922845972788	107.37	0.2108	107.53	107.41	107.62	0.15796					40	10	5	0	0	0	0.89803	1	46088	46088		0.35063	0.043601	1	241530000	+		15035	15819	7008	7041	17791	17791					0.16935985913414697
KLYKKQKKRKK	11	Unmodified	_KLYKKQKKRKK_					0	0	0			REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|17|1|sense	REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|17|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	738.5032226443291	2	738.49847	1474.98239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.11	1	100.32	99.82	100.82	0.20527								0	0	0	0.63775	1	42102	42102		0.30703	0.30703	1		+		15036	14280	7009	7042	17792	17792					0.26389497044033305
KLYLAKQVF	9	Unmodified	_KLYLAKQVF_					0	0	0		ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	ENSG00000023839|ENST00000647814|ABCC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3441650271416	2	555.33951	1108.66447	3.1746	0.001763	3.7069	0.0020586	6.8815	0.0038216	555.3427620980649	105.98	0.13488	106.14	106.07	106.2	0.16174					13	6	3	0	0	0	0.77526	1	45219	45219		4.3292	2.0265	1	28892000			15037	620	7010	7043	17793	17793					0.11448069787797976
KLYQEVEIASV	11	Unmodified	_KLYQEVEIASV_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	639.8514892458916	2	639.850635	1277.68672	1.7282	0.0011058	1.2291	0.00078647	2.9573	0.0018922	639.851099721808	40.961	0.31886	42.854	42.705	43.024	1.8927					21	9	3	0	0	0	0.25639	1	17164	17164		35.612	16.355	1	903440			15038	477	7011	7044	17794	17794					0.05898204674917906
KLYQEVEIASV	11	Unmodified	_KLYQEVEIASV_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	639.850635	1277.68672	1.8492	0.0011832	1.0716	0.00068569	2.9208	0.0018689	639.8511769348485	41.373	0.31888	42.699	42.524	42.843	1.3254	-0.07758	-7.6977E-05	NaN	35.612	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	862210			15039	477	7011	7044							0.05898204674917906
KMAAEKATG	9	Unmodified	_KMAAEKATG_					0	0	0			REV__ENSG00000186862|ENST00000619208|PDZD7	REV__ENSG00000186862|ENST00000619208|PDZD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7408935427666	2	453.739302	905.464052	2.7811	0.0012619	-0.58364	-0.00026482	2.1975	0.00099709	453.7396443684014	61.684	0.41239	63.641	63.465	63.877	1.9571					33	12	3	0	0	0	0.80152	1	25878	25878		3.2813	0.70383	1	1747100	+		15040	11515	7012	7045	17795	17795					0.0075385212867331575
KMAAEKATG	9	Unmodified	_KMAAEKATG_					0	0	0			REV__ENSG00000186862|ENST00000619208|PDZD7	REV__ENSG00000186862|ENST00000619208|PDZD7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	453.739302	905.464052	2.7811	0.0012619	-0.58364	-0.00026482	2.1975	0.00099709	453.7396443684014	61.684	0.41239	63.641	63.465	63.877	1.9571	-0.056761	0.00053376	NaN	3.2813	33	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1747100	+		15041	11515	7012	7045							0.0075385212867331575
KMAARSPA	8	Unmodified	_KMAARSPA_					0	0	0		ENST00000593284.5_1_19:47987540-47987672:+|nuORF	ENST00000593284.5_1_19:47987540-47987672:+|nuORF	ENST00000593284.5_1_19:47987540-47987672:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2262145876884	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.116	1	46.06	45.56	46.56	1.9438								0	0	0	1.0178	1	18494	18494		0.69038	0	1				15042	7502	7013	7046	17796	17796					0.021253065396763304
KMAEMLVEL	9	Unmodified	_KMAEMLVEL_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2809936404228	2	532.279946	1062.54534	1.4463	0.00076983	-2.3136	-0.0012315	-0.86734	-0.00046167	532.2799316069098	55.219	0.51586	56.629	56.422	56.937	1.4099					47	17	4	0	0	0	0.033102	2	23158	23106;23158		82.529	17.294	1	9284100			15043	4499	7014	7047	17797;17798	17798					0.016567917764405138
KMAEMLVEL	9	Unmodified	_KMAEMLVEL_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2806274294853	2	532.279946	1062.54534	1.4083	0.00074962	-0.55996	-0.00029806	0.84836	0.00045156	532.279796850536	54.722	0.46267	56.69	56.525	56.988	1.9684					29	15	2	0	0	0	0.033102	2	22921	22921;22969		82.529	26.352	1	8467100			15044	4499	7014	7047	17799;17800	17799					0.016567917764405138
KMAEMLVEL	9	Unmodified	_KMAEMLVEL_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	532.279946	1062.54534	1.8785	0.00099989	1.0324	0.00054953	2.9109	0.0015494	532.2803184129701	57.113	0.23953	57.113	56.953	57.192	0	0.28308	0.0017682	NaN	82.529	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1039600			15045	4499	7014	7047							0.016567917764405138
KMAEMLVEL	9	Unmodified	_KMAEMLVEL_					0	0	0		ENSG00000179010|ENST00000382581|MRFAP1;ENSG00000178988|ENST00000320848|MRFAP1L1	ENSG00000179010|ENST00000382581|MRFAP1	ENSG00000179010|ENST00000382581|MRFAP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	532.279946	1062.54534	2.3281	0.0012392	-0.46795	-0.00024908	1.8601	0.0009901	532.2795000947748	56.568	0.28893	56.889	56.731	57.02	0.32103	0.058443	0.00017097	NaN	82.529	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2103900			15046	4499	7014	7047							0.016567917764405138
KMAKKAKG	8	Unmodified	_KMAKKAKG_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	431.2736694216728	2	431.270573	860.526593	2.2045	0.00095072	3.5814	0.0015446	5.7859	0.0024953	431.27196560960897	66.973	1.2478	67.298	66.718	67.965	0.32449					73	40	2	0	0	0	0.89178	2	27962	27962;28086		0.69038	0.69038	1	5101700	+		15047	10496	7015	7048	17801;17802	17801					0.09075042987535653
KMAKKAKG	8	Unmodified	_KMAKKAKG_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	431.270573	860.526593	1.0487	0.00045228	4.7976	0.0020691	5.8464	0.0025214	431.2723002529151	67.137	1.1184	67.137	66.545	67.663	0	-0.088199	0.00023635	NaN	0.69038	78	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3864000	+		15048	10496	7015	7048							0.09075042987535653
KMAKKAKG	8	Unmodified	_KMAKKAKG_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	431.270573	860.526593	2.4435	0.0010538	6.7959	0.0029309	9.2394	0.0039847	431.27275232903196	65.843	0.64032	67.242	66.788	67.428	1.3989	0.015962	0.0019599	NaN	0.69038	42	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1630500	+		15049	10496	7015	7048							0.09075042987535653
KMAKLPKPVVV	11	Unmodified	_KMAKLPKPVVV_					0	0	0		nc|ENSG00000188385|Q5VZ66|JAKMIP3;ENSG00000188385|ENST00000684848|JAKMIP3	nc|ENSG00000188385|Q5VZ66|JAKMIP3	nc|ENSG00000188385|Q5VZ66|JAKMIP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1989318728447	4	303.199248	1208.76789	-0.70847	-0.00021481	-0.79629	-0.00024143	-1.5048	-0.00045624	303.1990925715122	32.856	0.69382	34.135	33.887	34.581	1.2782					66	30	4	0	0	0	1.0224	1	13826	13826		2.4348	1.4725	1	5954400			15050	4859	7016	7049	17803	17803					0.17185233903933295
KMAKLPKPVVV	11	Unmodified	_KMAKLPKPVVV_					0	0	0		nc|ENSG00000188385|Q5VZ66|JAKMIP3;ENSG00000188385|ENST00000684848|JAKMIP3	nc|ENSG00000188385|Q5VZ66|JAKMIP3	nc|ENSG00000188385|Q5VZ66|JAKMIP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1992675662041	4	303.199248	1208.76789	0.16026	4.859E-05	-1.7722	-0.00053734	-1.612	-0.00048875	303.1985862636281	32.312	0.76095	34.136	33.818	34.579	1.8246					68	28	4	0	0	0	1.0365	1	13609	13609		1.2148	0.51716	1	6319200			15051	4859	7016	7049	17804	17804					0.17185233903933295
KMDASLGNLFA	11	Unmodified	_KMDASLGNLFA_					0	0	0		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.7992431521416	2	583.797349	1165.58014	1.9223	0.0011222	0.73603	0.00042969	2.6583	0.0015519	583.7978789598179	57.118	0.35515	57.118	56.925	57.28	0					34	11	4	0	0	0	0.040846	2	23851	23804;23851		69.338	21.59	1	7570300			15052	4969	7017	7050	17805;17806	17806					0.0039775090874627494
KMDASLGNLFA	11	Unmodified	_KMDASLGNLFA_					0	0	0		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.7994872927666	2	583.797349	1165.58014	2.122	0.0012388	1.3603	0.00079412	3.4823	0.002033	583.7983253307102	56.657	0.38189	56.978	56.786	57.168	0.32103					39	12	4	0	0	0	0.10312	2	23781	23733;23781		55.235	15.285	1	10474000			15053	4969	7017	7050	17807;17808	17808					0.0039775090874627494
KMDASLGNLFA	11	Unmodified	_KMDASLGNLFA_					0	0	0		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.7980224490166	2	583.797349	1165.58014	1.064	0.00062118	0.053597	3.129E-05	1.1176	0.00065247	583.7974049367934	55.513	0.4192	56.922	56.647	57.066	1.4099					41	14	4	0	0	0	0.023369	3	23246	23198;23246;23302		96.936	49.187	1	21805000			15054	4969	7017	7050	17809;17810;17811	17810					0.0039775090874627494
KMDASLGNLFA	11	Unmodified	_KMDASLGNLFA_					0	0	0		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.7986328005791	2	583.797349	1165.58014	0.46278	0.00027017	1.0673	0.0006231	1.5301	0.00089327	583.7980762968252	55.016	0.37798	56.984	56.751	57.129	1.9684					35	12	4	0	0	0	0.040846	2	23039	23039;23087		69.338	21.59	1	17159000			15055	4969	7017	7050	17812;17813	17812					0.0039775090874627494
KMDASLGNLFA	11	Oxidation (M)	_KM(Oxidation (M))DASLGNLFA_		KM(1)DASLGNLFA		KM(61)DASLGNLFA	0	0	1		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MSMS	GG20161007_CRH_Patient100_A02_01	1	591.7953979372978	2	591.794806	1181.57506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.631	1	48.631	48.131	49.131	0								0	0	0	0.00048978	1	20309	20309		61.09	13.341	1				15056	4969	7017	7051	17814	17814		85			-0.008465529538852934
KMDASLGNLFA	11	Oxidation (M)	_KM(Oxidation (M))DASLGNLFA_		KM(1)DASLGNLFA		KM(53)DASLGNLFA	0	0	1		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	591.7964965701103	2	591.794806	1181.57506	1.6328	0.00096627	-0.61745	-0.00036541	1.0153	0.00060086	591.7950919734154	48.17	0.43897	48.5	48.259	48.698	0.33034					33	14	3	0	0	0	0.11371	1	20191	20191		53.317	20.531	1	3598200			15057	4969	7017	7051	17815	17815		85			-0.008465529538852934
KMDASLGNLFA	11	Oxidation (M)	_KM(Oxidation (M))DASLGNLFA_		KM(1)DASLGNLFA		KM(51)DASLGNLFA	0	0	1		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.7961303591728	2	591.794806	1181.57506	1.9058	0.0011278	1.4112	0.00083515	3.317	0.001963	591.7950477316864	46.612	0.40616	47.987	47.773	48.179	1.3751					25	12	3	0	0	0	0.12432	2	19561	19515;19561		51.415	29.669	1	3646600			15058	4969	7017	7051	17816;17817	17817		85			-0.008465529538852934
KMDASLGNLFA	11	Oxidation (M)	_KM(Oxidation (M))DASLGNLFA_		KM(1)DASLGNLFA		KM(48)DASLGNLFA	0	0	1		ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	ENSG00000196937|ENST00000359943|FAM3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.7960693240166	2	591.794806	1181.57506	1.4031	0.00083037	1.9241	0.0011387	3.3272	0.001969	591.7952844301925	46.145	0.43434	48.115	47.912	48.347	1.9703					19	13	2	0	0	0	0.14486	1	19360	19360		47.732	25.985	1	2927900			15059	4969	7017	7051	17818	17818		85			-0.008465529538852934
KMDIDVPDV	9	Unmodified	_KMDIDVPDV_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2590209841728	2	516.257525	1030.5005	2.3793	0.0012283	0.76468	0.00039477	3.144	0.0016231	516.2581866061157	43.787	0.34601	45.731	45.516	45.862	1.9438					26	10	3	0	0	0	0.11669	1	18346	18346		43.772	3.8151	1	2085000			15060	30	7018	7052	17819	17819					-0.013533157652773298
KMEFPKEWK	9	Unmodified	_KMEFPKEWK_					0	0	0			REV__CON__P34955	REV__CON__P34955	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5501891970634	3	408.214482	1221.62162	0.0024205	9.8808E-07	3.3608	0.0013719	3.3633	0.0013729	408.2159349686694	12.073	0.3434	12.86	12.781	13.124	0.78751					15	10	2	0	0	0	0.45911	1	5009	5009		17.443	3.0373	1	1256800	+	+	15061	8381	7019	7053	17820	17820					0.019669316680619886
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.4416076540947	4	388.441969	1549.73877	-1.0686	-0.00041509	-1.3048	-0.00050682	-2.3734	-0.00092192	388.4415362277407	19.31	0.68334	19.31	18.92	19.603	0					79	21	5	0	0	0	1.0224	2	7927	7927;7993		2.4348	1.325	1	13408000			15062	6957	7020	7054	17821;17822	17821					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.5867187380791	3	517.586867	1549.73877	1.0292	0.0005327	-2.919	-0.0015109	-1.8898	-0.00097816	517.5857879764645	19.279	1.209	19.279	18.864	20.073	0					123	38	5	0	0	0	0.95935	4	7991	7951;7991;8040;8091		6.2344	3.7996	1	25063000			15063	6957	7020	7054	17823;17824;17825;17826	17824					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.5870239138603	3	517.586867	1549.73877	0.68179	0.00035288	-1.7491	-0.00090532	-1.0673	-0.00055244	517.5863596550495	18.846	0.81669	19.039	18.571	19.387	0.19342					102	26	5	0	0	0	0.95935	4	7826	7710;7780;7826;7879		6.2344	3.7996	1	9514100			15064	6957	7020	7054	17827;17828;17829;17830	17829					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.4411498904228	4	388.441969	1549.73877	0.50792	0.0001973	-2.1166	-0.00082217	-1.6087	-0.00062488	388.4411075437874	18.851	0.70205	19.045	18.654	19.356	0.19342					64	22	3	0	0	0	1.0224	1	7814	7814		2.4348	0	1	2367500			15065	6957	7020	7054	17831	17831					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.5869018435478	3	517.586867	1549.73877	0.76653	0.00039675	-2.0023	-0.0010364	-1.2358	-0.00063962	517.5861862124965	18.093	0.77542	19.072	18.639	19.415	0.97922					88	27	4	0	0	0	0.98969	2	7501	7501;7552		4.4062	1.9714	1	6418300			15066	6957	7020	7054	17832;17833	17832					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	517.5866577029228	3	517.586867	1549.73877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.807	1	18.786	18.286	19.286	0.97922								0	0	0	0.63775	1	7413	7413		4.4062	1.9714	1				15067	6957	7020	7054	17834	17834					-0.014109551830188138
KMEYFYWRAEK	11	Unmodified	_KMEYFYWRAEK_					0	0	0		ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	ENST00000496711.5_1_9:130118742-130126953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.5859863162041	3	517.586867	1549.73877	0.46305	0.00023967	-1.7559	-0.00090882	-1.2928	-0.00066915	517.5861411001807	17.656	0.67235	18.959	18.586	19.259	1.3023					77	22	4	0	0	0	1.0224	4	7237	7237;7310;7365;7415		2.4348	0	1	4488700			15068	6957	7020	7054	17835;17836;17837;17838	17835					-0.014109551830188138
KMFESFIESV	10	Unmodified	_KMFESFIESV_					0	0	0		nc|ENSG00000114302|P13861-2|PRKAR2A;ENSG00000114302|ENST00000265563|PRKAR2A;CDC25A-PRKAR2A|1|fusion;CDC25A-PRKAR2A|2|fusion	nc|ENSG00000114302|P13861-2|PRKAR2A	nc|ENSG00000114302|P13861-2|PRKAR2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.7998535037041	2	608.799557	1215.58456	3.0517	0.0018578	-0.095781	-5.8311E-05	2.9559	0.0017995	608.799170476927	61.188	0.30702	62.608	62.409	62.716	1.4196					22	9	3	0	0	0	0.22041	1	25633	25633		61.602	32.52	1	1976400			15069	132	7021	7055	17839	17839					-0.014607846683702519
KMFESFIESV	10	Unmodified	_KMFESFIESV_					0	0	0		nc|ENSG00000114302|P13861-2|PRKAR2A;ENSG00000114302|ENST00000265563|PRKAR2A;CDC25A-PRKAR2A|1|fusion;CDC25A-PRKAR2A|2|fusion	nc|ENSG00000114302|P13861-2|PRKAR2A	nc|ENSG00000114302|P13861-2|PRKAR2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8030883669853	2	608.799557	1215.58456	3.3355	0.0020306	0.525	0.00031962	3.8605	0.0023503	608.8000105573032	60.598	0.34265	62.563	62.387	62.729	1.9653					23	10	3	0	0	0	0.19062	2	25458	25397;25458		65.474	27.298	1	1472000			15070	132	7021	7055	17840;17841	17841					-0.014607846683702519
KMFNILKK	8	Unmodified	_KMFNILKK_					0	0	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3169433474541	2	511.31498	1020.61541	3.6044	0.001843	0.16314	8.3414E-05	3.7675	0.0019264	511.31474267726145	107.57	0.18661	107.73	107.64	107.83	0.15795					23	9	3	0	0	0	0.89051	1	46247	46247		2.3027	1.5091	1	150640000	+		15071	14555	7022	7056	17842	17842					0.10592458227199586
KMFNILKK	8	Unmodified	_KMFNILKK_					0	0	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	511.31498	1020.61541	3.4684	0.0017734	0.5411	0.00027667	4.0095	0.0020501	511.31492775473134	107.59	0.18478	107.75	107.66	107.84	0.15781	0.011477	0.00020743	NaN	2.3027	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	79426000	+		15072	14555	7022	7056							0.10592458227199586
KMFNILKK	8	Unmodified	_KMFNILKK_					0	0	0			REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	REV__nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	511.31498	1020.61541	3.6044	0.001843	0.16314	8.3414E-05	3.7675	0.0019264	511.31474267726145	107.57	0.18661	107.73	107.64	107.83	0.15795	-0.011477	-0.00017909	NaN	2.3027	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150640000	+		15073	14555	7022	7056							0.10592458227199586
KMFSDEILL	9	Unmodified	_KMFSDEILL_					0	0	0		nc|ENSG00000178202|Q7Z4H8-3|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;ENSG00000178202|ENST00000323468|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.2922851443291	2	548.291368	1094.56818	2.4507	0.0013437	-0.36391	-0.00019953	2.0868	0.0011442	548.2917058027004	60.214	0.57495	61.634	61.358	61.933	1.4196					75	18	5	0	0	0	0.070055	2	25200	25200;25305		60.074	7.8056	1	19825000			15074	4477	7023	7057	17843;17844	17843					0.02468134165542324
KMFSDEILL	9	Unmodified	_KMFSDEILL_					0	0	0		nc|ENSG00000178202|Q7Z4H8-3|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;ENSG00000178202|ENST00000323468|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.2925903201103	2	548.291368	1094.56818	2.8395	0.0015569	-0.73401	-0.00040245	2.1055	0.0011544	548.291547735659	59.657	0.54577	61.626	61.405	61.95	1.969					70	17	5	0	0	0	0.063746	3	25025	24980;25025;25078		62.573	12.64	1	18540000			15075	4477	7023	7057	17845;17846;17847	17846					0.02468134165542324
KMGLIFEV	8	Unmodified	_KMGLIFEV_					0	0	0		ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.7662231326103	2	468.764789	935.515025	2.4413	0.0011444	0.27246	0.00012772	2.7138	0.0012721	468.76510141295074	63.571	0.4359	63.571	63.366	63.802	0					33	13	3	0	0	0	0.66196	1	26520	26520		34.102	1.9855	1	3178200			15076	1075	7024	7058	17848	17848					0.0446880117353885
KMGLIFEV	8	Unmodified	_KMGLIFEV_					0	0	0		ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.7668029665947	2	468.764789	935.515025	2.9307	0.0013738	0.69286	0.00032479	3.6236	0.0016986	468.7653247256726	61.009	0.48954	62.974	62.76	63.25	1.9653					35	15	3	0	0	0	0.66196	1	25577	25577		34.102	1.9855	1	2890700			15077	1075	7024	7058	17849	17849					0.0446880117353885
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9686157107353	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.146	1	20.146	19.646	20.646	0								0	0	0	0.63775	1	8373	8373		0.30703	0	1		+		15078	9227	7025	7059	17850	17850					0.2408973316319134
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9694091677666	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.453	1	20.453	19.953	20.953	0								0	0	0	0.63775	1	8503	8503		0.30703	0	1		+		15079	9227	7025	7059	17851	17851					0.2408973316319134
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9694091677666	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.644	1	20.644	20.144	21.144	0								0	0	0	0.63775	1	8582	8582		0.30703	0	1		+		15080	9227	7025	7059	17852	17852					0.2408973316319134
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9729492068291	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.912	1	61.912	61.412	62.412	0								0	0	0	0.63775	1	25812	25812		0	0	1		+		15081	9227	7025	7059	17853	17853					0.2408973316319134
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9691039919853	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.729	1	70.729	70.229	71.229	0								0	0	0	0.63775	1	29460	29460		0.30703	0	1		+		15082	9227	7025	7059	17854	17854					0.2408973316319134
KMIKIFKLLLR	11	Unmodified	_KMIKIFKLLLR_					0	0	0			REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	REV__nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9697143435478	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.347	1	78.347	77.847	78.847	0								0	0	0	0.63775	1	32615	32615		0.30703	0	1		+		15083	9227	7025	7059	17855	17855					0.2408973316319134
KMISAIPTL	9	Unmodified	_KMISAIPTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2942687869072	2	487.291171	972.567789	2.4507	0.0011942	3.0833	0.0015025	5.5341	0.0026967	487.2930596900084	51.228	0.24899	51.556	51.449	51.698	0.32824					12	7	2	0	0	0	0.32838	1	21495	21495		24.021	3.5669	1	348230			15084	4569	7026	7060	17856	17856					0.0804075923633718
KMISAIPTL	9	Unmodified	_KMISAIPTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2936584353447	2	487.291171	972.567789	2.2992	0.0011204	1.0114	0.00049285	3.3106	0.0016132	487.29183589666013	49.607	1.0329	50.999	50.735	51.767	1.3911					79	32	4	0	0	0	0.18809	1	20861	20861		34.402	9.0024	1	14772000			15085	4569	7026	7060	17857	17857					0.0804075923633718
KMISAIPTL	9	Unmodified	_KMISAIPTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2918273806572	2	487.291171	972.567789	1.7705	0.00086275	1.3039	0.00063536	3.0744	0.0014981	487.29186843010996	48.993	1.0586	50.97	50.761	51.819	1.9772					75	33	4	0	0	0	0.11669	2	20638	20638;20677		43.772	3.8151	1	14034000			15086	4569	7026	7060	17858;17859	17858					0.0804075923633718
KMKILLVFL	9	Unmodified	_KMKILLVFL_					0	0	0		ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant;ENSG00000132464|ENST00000396073|ENAM	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.725634753704	1	1104.72134	1103.71406	2.7872	0.0030791	1.3478	0.0014889	4.135	0.0045681	1104.7225342962454	107.51	0.19158	107.67	107.56	107.75	0.15781					36	9	5	0	0	0	0.85403	1	46231	46231		0	0	1	502040000			15087	450	7027	7061	17860	17860					0.16635061472265988
KMKILLVFL	9	Unmodified	_KMKILLVFL_					0	0	0		ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant;ENSG00000132464|ENST00000396073|ENAM	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8661987185478	2	552.864306	1103.71406	3.1561	0.0017449	0.64396	0.00035602	3.8001	0.0021009	552.8645831916081	105.98	0.1873	106.14	106.07	106.26	0.16174					33	9	5	0	0	0	0.85403	1	45191	45191		0	0	1	860680000			15088	450	7027	7061	17861	17861					0.16635061472265988
KMKILLVFL	9	Unmodified	_KMKILLVFL_					0	0	0		ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant;ENSG00000132464|ENST00000396073|ENAM	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	ENAM|p.E968Afs*96|1|0.07|ENSG00000132464|chr4:70644328-70644329|-/CC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1104.725512683392	1	1104.72134	1103.71406	3.3143	0.0036613	0.53865	0.00059506	3.8529	0.0042564	1104.7215675792966	107.51	0.19357	107.67	107.54	107.74	0.15795					28	9	4	0	0	0	0.85403	1	46238	46238		0	0	1	289490000			15089	450	7027	7061	17862	17862					0.16635061472265988
KMKLLLFLV	9	Unmodified	_KMKLLLFLV_					0	0	0		ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1104.727099597454	1	1104.72134	1103.71406	3.6819	0.0040675	1.2428	0.001373	4.9247	0.0054404	1104.7223614293814	107.52	0.17738	107.58	107.48	107.66	0.052452					24	8	4	0	0	0	0.84963	1	46014	46014		0.6015	0	1	43656000			15090	2936	7028	7062	17863	17863					0.1663506147224325
KMKLLLFLV	9	Unmodified	_KMKLLLFLV_					0	0	0		ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.725024402142	1	1104.72134	1103.71406	2.7872	0.0030791	1.3478	0.0014889	4.135	0.0045681	1104.7225342962454	107.51	0.19158	107.67	107.56	107.75	0.15781					36	9	5	0	0	0	0.84963	1	46313	46313		0.6015	0	1	502040000			15091	2936	7028	7062	17864	17864					0.1663506147224325
KMKLLLFLV	9	Unmodified	_KMKLLLFLV_					0	0	0		ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	ENSG00000140835|ENST00000539698|CHST4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1104.724902331829	1	1104.72134	1103.71406	3.3143	0.0036613	0.53865	0.00059506	3.8529	0.0042564	1104.7215675792966	107.51	0.19357	107.67	107.54	107.74	0.15795					28	9	4	0	0	0	0.84963	1	46176	46176		0.6015	0	1	289490000			15092	2936	7028	7062	17865	17865					0.1663506147224325
KMKPKPRILS	10	Unmodified	_KMKPKPRILS_					0	0	0		ENST00000481250.1_1_4:156294267-156297002:-|nuORF;nc|ENSG00000164114|Q49MG5-2|MAP9;ENSG00000164114|ENST00000311277|MAP9	ENST00000481250.1_1_4:156294267-156297002:-|nuORF	ENST00000481250.1_1_4:156294267-156297002:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.9232971072197	3	399.921521	1196.74273	2.7255	0.00109	1.1591	0.00046355	3.8846	0.0015535	399.9219825953898	90.344	0.46468	90.553	90.275	90.74	0.20903					61	14	5	0	0	0	0.88314	1	37792	37792		1.5923	0	1	20735000			15093	3751	7029	7063	17866	17866					0.15223179101394635
KMKPKPRILS	10	Unmodified	_KMKPKPRILS_					0	0	0		ENST00000481250.1_1_4:156294267-156297002:-|nuORF;nc|ENSG00000164114|Q49MG5-2|MAP9;ENSG00000164114|ENST00000311277|MAP9	ENST00000481250.1_1_4:156294267-156297002:-|nuORF	ENST00000481250.1_1_4:156294267-156297002:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.9236938357353	3	399.921521	1196.74273	4.6415	0.0018562	1.4914	0.00059643	6.1329	0.0024527	399.92208603647134	89.662	0.4977	90.682	90.397	90.894	1.0199					48	15	4	0	0	0	0.88314	1	37743	37743		1.5923	0	1	9097100			15094	3751	7029	7063	17867	17867					0.15223179101394635
KMLDKIISI	9	Unmodified	_KMLDKIISI_					0	0	0		nc|ENSG00000106771|Q9H330-3|TMEM245;ENSG00000106771|ENST00000374586|TMEM245;nc|ENSG00000106771|Q9H330-4|TMEM245;TMEM245|p.L666Sfs*9|1|0.2|ENSG00000106771|chr9:109050410-109050411|-/A|frameshift_variant	nc|ENSG00000106771|Q9H330-3|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8269531130791	2	530.825378	1059.6362	2.7233	0.0014456	1.6596	0.00088098	4.383	0.0023266	530.8259268320077	44.84	0.24945	46.205	46.056	46.305	1.3653					13	7	2	0	0	0	0.087723	1	18783	18783		53.404	18.472	1	1206400			15095	1584	7030	7064	17868	17868					0.10877003816221986
KMLDNFYNF	9	Unmodified	_KMLDNFYNF_					0	0	0		ENST00000530208.1_1_11:86014499-86055761:+|nuORF;ENSG00000149196|ENST00000278483|HIKESHI;ENST00000528004.5_1_11:86037714-86055806:+|nuORF;ENST00000531485.5_1_11:86013462-86056677:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.2773925662041	2	596.278792	1190.54303	0.42217	0.00025173	-0.4278	-0.00025509	-0.005631	-3.3577E-06	596.2786324007469	56.042	0.23689	57.452	57.342	57.579	1.4099					20	12	2	0	0	0	0.026734	1	23505	23505		92.653	48.246	1	3828100			15096	3232	7031	7065	17869	17869					-0.04461920637027106
KMLDNFYNF	9	Unmodified	_KMLDNFYNF_					0	0	0		ENST00000530208.1_1_11:86014499-86055761:+|nuORF;ENSG00000149196|ENST00000278483|HIKESHI;ENST00000528004.5_1_11:86037714-86055806:+|nuORF;ENST00000531485.5_1_11:86013462-86056677:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	ENST00000530208.1_1_11:86014499-86055761:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.2789184451103	2	596.278792	1190.54303	0.57004	0.0003399	-0.60012	-0.00035784	-0.030079	-1.7936E-05	596.2786037145135	55.573	0.23405	57.541	57.432	57.666	1.9684					16	11	2	0	0	0	0.024001	1	23297	23297		96.111	51.704	1	4760700			15097	3232	7031	7065	17870	17870					-0.04461920637027106
KMLEQRRRLAL	11	Unmodified	_KMLEQRRRLAL_					0	0	0		nc|ENSG00000214686|A8MYZ5|IQCF6;ENSG00000214686|ENST00000667863|IQCF6	nc|ENSG00000214686|A8MYZ5|IQCF6	nc|ENSG00000214686|A8MYZ5|IQCF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	471.9531127810478	3	471.953884	1412.83982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.472	1	94.617	94.117	95.117	0.14493								0	0	0	0.63775	1	39540	39540		0.45452	0.29519	1				15098	5244	7032	7066	17871	17871					0.1499154131040541
KMLRREARLRR	11	Unmodified	_KMLRREARLRR_					0	0	0		ENST00000464432.5_1_2:131100487-131103076:+|nuORF;ENST00000473689.5_1_2:131100487-131103328:+|nuORF	ENST00000464432.5_1_2:131100487-131103076:+|nuORF	ENST00000464432.5_1_2:131100487-131103076:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	742.9640380740166	2	742.956978	1483.8994	3.1923	0.0023717	3.1471	0.0023382	6.3394	0.0047099	743.4602011602589	85.957	0.35863	87.505	87.252	87.61	1.547					32	14	3	0	0	0	1.0395	1	36132	36132		0.30703	0	1	7539400			15099	6692	7033	7067	17872	17872					0.17680857044388176
KMMDVTVTI	9	Unmodified	_KMMDVTVTI_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2731201052666	2	519.272121	1036.52969	1.7508	0.00090914	-0.39098	-0.00020302	1.3598	0.00070611	519.2721949657937	46.164	0.43919	47.539	47.334	47.773	1.3751					49	13	5	0	0	0	0.040497	2	19327	19327;19377		75.761	14.403	1	16626000			15100	1422	7034	7068	17873;17874	17873					0.012885052593901491
KMMDVTVTI	9	Unmodified	_KMMDVTVTI_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2729980349541	2	519.272121	1036.52969	1.4377	0.00074656	-0.20746	-0.00010773	1.2302	0.00063883	519.2722678375216	45.738	0.68512	47.709	47.471	48.156	1.9703					52	21	5	0	0	0	0.033102	2	19128	19128;19177		82.529	15.185	1	12194000			15101	1422	7034	7068	17875;17876	17875					0.012885052593901491
KMPDDVWLV	9	Unmodified	_KMPDDVWLV_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.7852050662041	2	551.78371	1101.55287	2.3143	0.001277	-0.99077	-0.00054669	1.3236	0.00073033	551.7838934360518	59.758	0.7605	61.177	60.926	61.687	1.4196					51	24	3	0	0	0	0.11643	2	25108	25043;25108		43.858	23.405	1	2602100			15102	1707	7035	7069	17877;17878	17878					0.006152673683345711
KMPDDVWLV	9	Unmodified	_KMPDDVWLV_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.7846557497978	2	551.78371	1101.55287	2.561	0.0014131	-1.3607	-0.00075081	1.2003	0.00066232	551.7836429734734	59.24	0.55105	61.209	60.971	61.522	1.969					38	17	3	0	0	0	0.17276	1	24899	24899		36.127	13.391	1	3292900			15103	1707	7035	7069	17879	17879					0.006152673683345711
KMPDDVWLV	9	Unmodified	_KMPDDVWLV_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	551.78371	1101.55287	2.0772	0.0011462	0.2881	0.00015897	2.3653	0.0013051	551.7840547855278	60.964	0.40589	61.292	61.141	61.547	0.32867	0.065913	0.001402	NaN	43.858	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381300			15104	1707	7035	7069							0.006152673683345711
KMPKMKMPTF	10	Unmodified	_KMPKMKMPTF_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant;AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.5541869997978	3	413.553452	1237.63853	0.34881	0.00014425	0.22765	9.4146E-05	0.57647	0.0002384	413.5538784347693	32.855	0.80015	34.134	33.613	34.413	1.2782					57	28	3	0	0	0	0.4341	3	13796	13701;13751;13796		27.088	17.324	1	2167900			15105	30	7036	7070	17880;17881;17882	17882					0.02921392958000979
KMPKMKMPTF	10	Unmodified	_KMPKMKMPTF_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant;AHNAK|p.P767Cfs*7|1|0.15|ENSG00000124942|chr11:62532109-62532119|CCACTTCTGGG/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.5547668337822	3	413.553452	1237.63853	0.78993	0.00032668	0.16544	6.842E-05	0.95537	0.0003951	413.5537823295165	32.057	0.85571	33.882	33.51	34.366	1.8246					75	30	4	0	0	0	0.52861	3	13439	13439;13500;13570		22.775	9.8617	1	1601700			15106	30	7036	7070	17883;17884;17885	17883					0.02921392958000979
KMPKVKMPKF	10	Unmodified	_KMPKVKMPKF_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	411.9127990603447	3	411.911857	1232.71374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.624	1	25.865	25.365	26.365	1.241								0	0	0	0.65945	1	10300	10300		5.4027	3.4963	1				15107	30	7037	7071	17886	17886					0.1066931848074546
KMPKVKMPKF	10	Unmodified	_KMPKVKMPKF_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	411.9122192263603	3	411.911857	1232.71374	0.51408	0.00021176	0.66867	0.00027543	1.1827	0.00048719	411.9121508641572	24.061	0.67031	25.746	25.473	26.143	1.6845					27	21	2	0	0	0	0.77494	1	10076	10076		14.957	11.37	1	535360			15108	30	7037	7071	17887	17887					0.1066931848074546
KMQSKPRDIT	10	Unmodified	_KMQSKPRDIT_					0	0	0		L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	602.3280517458916	2	602.329347	1202.64414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.959	1	68.959	68.459	69.459	0								0	0	0	0.66052	1	28717	28717		3.5965	0	1				15109	7692	7038	7072	17888	17888					0.050925310656793954
KMRIIAFV	8	Unmodified	_KMRIIAFV_					0	0	0		ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4	ENST00000462970.5_1_1:151227258-151237442:+|nuORF	ENST00000462970.5_1_1:151227258-151237442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.3037902712822	2	489.301873	976.589193	3.2095	0.0015704	0.96353	0.00047146	4.173	0.0020419	489.3019368504373	107.66	0.18053	107.82	107.72	107.9	0.15781					28	9	4	0	0	0	0.89008	1	46351	46351		2.5775	1.7838	1	404850000			15110	3524	7039	7073	17889	17889					0.0999618905573243
KMRKQYKKKRR	11	Unmodified	_KMRKQYKKKRR_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.3266479372978	3	517.324311	1548.9511	2.9017	0.0015011	1.0171	0.00052617	3.9188	0.0020273	517.6591639799472	98.263	0.083809	98.354	98.286	98.37	0.090881					8	2	4	0	0	0	1.0396	1	41117	41117		0.073264	0	1	18995000	+		15111	9645	7040	7074	17890	17890					0.19858600738302812
KMRLVFLEK	9	Unmodified	_KMRLVFLEK_					0	0	0			REV__ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	REV__ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.5724670290947	3	388.570488	1162.68964	2.6219	0.0010188	1.3897	0.00054	4.0116	0.0015588	388.5710009925846	90.331	0.55959	90.541	90.275	90.835	0.20904					57	17	4	0	0	0	0.847	1	37936	37936		0.96228	0	1	31577000	+		15112	8152	7041	7075	17891	17891					0.11479801318751015
KMRLVFLEK	9	Unmodified	_KMRLVFLEK_					0	0	0			REV__ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	REV__ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.5722228884697	3	388.570488	1162.68964	4.4123	0.0017145	0.82065	0.00031888	5.233	0.0020334	388.5708231264223	89.316	0.53014	90.721	90.456	90.986	1.4045					54	16	5	0	0	0	0.847	1	37623	37623		0.96228	0	1	19796000	+		15113	8152	7041	7075	17892	17892					0.11479801318751015
KMTLWWDAPL	10	Unmodified	_KMTLWWDAPL_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1260.647265613079	1	1260.64454	1259.63727	1.353	0.0017057	0.83268	0.0010497	2.1857	0.0027554	1260.6452839389274	104.84	0.09053	104.84	104.77	104.86	0					14	4	4	0	0	0	0.89803	1	44344	44344		1.6526	0	1	102360000			15114	3425;7900	7042	7076	17893	17893					0.017832181850963025
KMVLLLLPRVP	11	Unmodified	_KMVLLLLPRVP_					0	0	0		ENST00000523590.5_3_1:242011560-242012219:+|nuORF	ENST00000523590.5_3_1:242011560-242012219:+|nuORF	ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7145568728447	4	320.46371	1277.82573	-0.036318	-1.1639E-05	0.023061	7.3903E-06	-0.013256	-4.2482E-06	320.463821436085	22.983	0.43338	24.197	24.01	24.443	1.2145					23	13	3	0	0	0	1.039	1	9611	9611		0.45452	0.31463	1	496670			15115	7102	7043	7077	17894	17894					0.19793495829367203
KMVLLLLPRVP	11	Unmodified	_KMVLLLLPRVP_					0	0	0		ENST00000523590.5_3_1:242011560-242012219:+|nuORF	ENST00000523590.5_3_1:242011560-242012219:+|nuORF	ENST00000523590.5_3_1:242011560-242012219:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	320.46371	1277.82573	0.13896	4.4532E-05	-1.3342	-0.00042757	-1.1952	-0.00038303	320.46335873895373	24.288	0.66934	24.53	24.073	24.742	0.24251	0.25752	-0.00077644	NaN	0.45452	32	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	353600			15116	7102	7043	7077							0.19793495829367203
KMVRVTVLLH	10	Unmodified	_KMVRVTVLLH_					0	0	0			REV__ENST00000566987.5_1_16:71898855-71901807:-|nuORF	REV__ENST00000566987.5_1_16:71898855-71901807:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2509948611259	3	399.249638	1194.72708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.7	1	116.7	116.2	117.2	0								0	0	0	0.66222	1	50335	50335		0.69767	0.1345	1		+		15117	13942	7044	7078	17895	17895					0.13750892584334906
KMVSISNYPL	10	Unmodified	_KMVSISNYPL_					0	0	0		ENSG00000126749|ENST00000599672|EMG1	ENSG00000126749|ENST00000599672|EMG1	ENSG00000126749|ENST00000599672|EMG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3092529177666	2	576.310092	1150.60563	2.9341	0.001691	-2.3866	-0.0013754	0.5475	0.00031553	576.3091224028178	59.78	0.88731	61.749	61.315	62.202	1.969					55	28	3	0	0	0	0.65659	1	25225	25225		20.415	0	1	5537900			15118	2313	7045	7079	17896	17896					0.036352254311623255
KMYEEFLSKV	10	Unmodified	_KMYEEFLSKV_					0	0	0		nc|ENSG00000108946|P10644-2|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;ENSG00000108946|ENST00000589228|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.3289672732353	2	637.328482	1272.64241	1.4313	0.00091222	1.7425	0.0011106	3.1738	0.0020228	637.3297280891181	42.536	0.22369	43.876	43.667	43.891	1.3399					12	6	2	0	0	0	0.67383	1	17797	17797		19.626	9.552	1	887160			15119	1652	7046	7080	17897	17897					0.01699477257034232
KMYEEFLSKV	10	Unmodified	_KMYEEFLSKV_					0	0	0		nc|ENSG00000108946|P10644-2|PRKAR1A;ENSG00000188191|ENST00000537384|PRKAR1B;ENSG00000108946|ENST00000589228|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	nc|ENSG00000108946|P10644-2|PRKAR1A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	637.328482	1272.64241	1.3456	0.00085756	0.15389	9.8076E-05	1.4994	0.00095564	637.3289904744896	41.903	0.21937	43.806	43.681	43.9	1.9036	-0.034962	-0.00063793	NaN	19.626	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660320			15120	1652	7046	7080							0.01699477257034232
KNAALEAMF	9	Unmodified	_KNAALEAMF_					0	0	0			REV__SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant	REV__SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.1701843142509	3	332.172394	993.495352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.383	1	50.383	49.883	50.883	0								0	0	0	0.42693	1	21018	21018		1.0715	0	1		+		15121	11112	7047	7081	17898	17898					-0.0016557483722863253
KNADRLKENR	10	Unmodified	_KNADRLKENR_					0	0	0			REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	REV__nc|ENSG00000156256|Q9Y5T5-4|USP16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3488036990166	2	622.346917	1242.67928	3.2406	0.0020168	-1.7456	-0.0010864	1.4949	0.00093037	622.3458638123129	90.743	0.57442	92.108	91.864	92.438	1.366					65	17	5	0	0	0	0.82659	1	38320	38320		9.3831	0.78985	1	32754000	+		15122	10509	7048	7082	17899	17899					0.06764909917842488
KNAGTYDAK	9	Unmodified	_KNAGTYDAK_					0	0	0		ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	ENSG00000159713|ENST00000393957|TPPP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	323.1641113162041	3	323.166296	966.47706	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.086	1	97.086	96.586	97.586	0								0	0	0	0.42693	1	40587	40587		1.0715	0	1				15123	3538	7049	7083	17900	17900					-0.00751993487585878
KNAKVKSAA	9	Unmodified	_KNAKVKSAA_					0	0	0			REV__ENST00000538236.1_1_12:123345166-123345832:+|nuORF	REV__ENST00000538236.1_1_12:123345166-123345832:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1914245486259	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.805	1	62.135	61.635	62.635	0.32974								0	0	0	0.42693	1	25896	25896		1.0715	0.61312	1		+		15124	9801	7050	7084	17901	17901					0.08901180025702615
KNALTGIL	8	Unmodified	_KNALTGIL_					0	0	0		nc|ENSG00000120658|Q8TC92-2|ENOX1;ENSG00000120658|ENST00000690772|ENOX1	nc|ENSG00000120658|Q8TC92-2|ENOX1	nc|ENSG00000120658|Q8TC92-2|ENOX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2598754763603	2	415.260728	828.506903	0.66902	0.00027782	-2.3008	-0.00095544	-1.6318	-0.00067762	415.2595980101045	78.494	0.47294	78.494	78.283	78.756	0					35	14	3	0	0	0	0.8909	1	32717	32717		2.0598	0	1	2920100			15125	2113	7051	7085	17902	17902					0.08578990248417995
KNAPLDHAE	9	Unmodified	_KNAPLDHAE_					0	0	0			REV__ENSG00000169184|ENST00000302326|MN1	REV__ENSG00000169184|ENST00000302326|MN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1705200076103	3	332.169929	993.487959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.522	1	47.897	47.397	48.397	1.3751								0	0	0	0.42693	1	19487	19487		0.96228	0	1		+		15126	10934	7052	7086	17903	17903					-0.00904591113294373
KNAPLKYTS	9	Unmodified	_KNAPLKYTS_					0	0	0		nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	nc|ENSG00000125675|P42263|GRIA3	nc|ENSG00000125675|P42263|GRIA3	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1951782107353	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.285	1	94.43	93.93	94.93	0.14493								0	0	0	0.42693	1	39462	39462		0.96228	0.18574	1				15127	2269	7053	7087	17904	17904					0.05093742960275449
KNAPVPPP	8	Unmodified	_KNAPVPPP_					0	0	0			REV__ENST00000515737.5_1_4:2825262-2835558:+|nuORF	REV__ENST00000515737.5_1_4:2825262-2835558:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	410.2039367556572	2	410.239796	818.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.446	1	83.716	83.216	84.216	0.27029								0	0	0	1.0178	1	34899	34899		2.3027	1.5091	1		+		15128	8868	7054	7088	17905	17905					0.04854434559888432
KNCDDHHE	8	Unmodified	_KNCDDHHE_					0	0	0			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MSMS	GG20161007_CRH_Patient100_A02_01	1	333.1310302615166	3	333.131257	996.371943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.237	1	83.237	82.737	83.737	0								0	0	0	1.0178	1	34682	34682		0.40072	0	1		+		15129	9236	7055	7089	17906	17906					-0.12638857955653293
KNCEEYCMIY	10	Unmodified	_KNCEEYCMIY_					0	0	0			REV__nc|ENSG00000293419|Q7Z5A4|PRSS42P	REV__nc|ENSG00000293419|Q7Z5A4|PRSS42P	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	325.1288024783134	4	324.63308	1294.50322	1.0853	0.00035232	-2.5744	-0.00083573	-1.4891	-0.00048341	324.632986285059	49.471	0.12984	49.801	49.727	49.857	0.33019					5	3	2	0	0	0	0.12561	1	20730	20730		0.13989	0.04505	1	248840	+		15130	14575	7056	7090	17907	17907					-0.1322555169426778
KNCHRTSP	8	Unmodified	_KNCHRTSP_					0	0	0			REV__ENST00000573308.5_1_4:16228380-16240465:+|nuORF	REV__ENST00000573308.5_1_4:16228380-16240465:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.1596557497978	3	314.823988	941.450133	2.0558	0.00064722	1.6405	0.00051648	3.6964	0.0011637	314.82443911882115	75.581	0.69314	77.362	77.166	77.859	1.7817					58	22	4	0	0	0	2.3239	1	31871	31871		0	0	1	12627000	+		15131	13973	7057	7091	17908	17908					-0.022933805797379136
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.7574951052666	2	456.75783	911.501106	2.5123	0.0011475	-1.2613	-0.0005761	1.251	0.0005714	456.75655666737964	84.66	0.31946	84.66	84.461	84.781	0					16	9	3	0	0	0	0.89051	1	35293	35293		2.3027	0	1	561890	+		15132	12463	7058	7092	17909	17909					0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2484008669853	3	304.840979	911.501106	0.041944	1.2786E-05	-2.685	-0.0008185	-2.6431	-0.00080571	304.8402220156553	27.739	0.34162	29.515	29.354	29.696	1.7754					14	10	2	0	0	0	2.3239	1	11580	11580		0.35063	0	1	354420	+		15133	12463	7058	7092	17910	17910					0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2484008669853	3	304.840979	911.501106	0.022512	6.8625E-06	-1.8645	-0.00056839	-1.842	-0.00056152	304.8402528416008	27.203	0.30703	28.95	28.835	29.142	1.747					13	9	2	0	0	0	2.3239	1	11360	11360		0.35063	0	1	258820	+		15134	12463	7058	7092	17911	17911					0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	456.75783	911.501106	2.5123	0.0011475	-1.2613	-0.0005761	1.251	0.0005714	456.75655666737964	84.66	0.31946	84.66	84.461	84.781	0	-0.20801	0.00086739	NaN	2.3027	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561890	+		15135	12463	7058	7092							0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	456.75783	911.501106	3.1528	0.0014401	-1.5522	-0.00070899	1.6006	0.0007311	456.7570776103732	84.769	0.31856	85.03	84.886	85.204	0.26083	0.16146	0.00060162	NaN	2.3027	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655210	+		15136	12463	7058	7092							0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.840979	911.501106	0.40107	0.00012226	-1.6292	-0.00049664	-1.2281	-0.00037438	304.84017337595805	29.416	0.24421	29.696	29.559	29.803	0.2793	0.090409	0.00064706	NaN	0.35063	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557090	+		15137	12463	7058	7092							0.041815684650941876
KNCHVAKI	8	Unmodified	_KNCHVAKI_					0	0	0			REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	REV__ENST00000334982.8_1_20:20013985-20014090:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	456.75783	911.501106	1.7207	0.00078593	-3.1485	-0.0014381	-1.4278	-0.00065216	456.7564897605544	83.727	0.22217	84.915	84.796	85.019	1.1879	0.046547	-0.00085658	NaN	2.3027	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	614370	+		15138	12463	7058	7092							0.041815684650941876
KNCLVYSIP	9	Unmodified	_KNCLVYSIP_					0	0	0		nc|ENSG00000086827|O43264-2|ZW10;ENSG00000086827|ENST00000200135|ZW10	nc|ENSG00000086827|O43264-2|ZW10	nc|ENSG00000086827|O43264-2|ZW10	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.1867553591728	3	346.188044	1035.5423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.06	1	50.06	49.56	50.56	0								0	0	0	0.42693	1	20888	20888		0.96228	0	1				15139	1077	7059	7093	17912	17912					0.025952847139024016
KNCLVYSIP	9	Unmodified	_KNCLVYSIP_					0	0	0		nc|ENSG00000086827|O43264-2|ZW10;ENSG00000086827|ENST00000200135|ZW10	nc|ENSG00000086827|O43264-2|ZW10	nc|ENSG00000086827|O43264-2|ZW10	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.1863586306572	3	346.188044	1035.5423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.352	1	50.352	49.852	50.852	0								0	0	0	0.42693	1	21006	21006		0.96228	0	1				15140	1077	7059	7093	17913	17913					0.025952847139024016
KNCPLSWCQ	9	Unmodified	_KNCPLSWCQ_					0	0	0		ENST00000521197.5_1_7:27191940-27192297:+|nuORF	ENST00000521197.5_1_7:27191940-27192297:+|nuORF	ENST00000521197.5_1_7:27191940-27192297:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.1651489138603	3	360.165133	1077.47357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.119	1	55.523	55.023	56.023	1.4048								0	0	0	0.42693	1	22653	22653		0.96228	0.33545	1				15141	7081	7060	7094	17914	17914					-0.06206702857457458
KNCPLSWCQ	9	Unmodified	_KNCPLSWCQ_					0	0	0		ENST00000521197.5_1_7:27191940-27192297:+|nuORF	ENST00000521197.5_1_7:27191940-27192297:+|nuORF	ENST00000521197.5_1_7:27191940-27192297:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.1665832400322	3	360.165133	1077.47357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.316	1	55.721	55.221	56.221	1.4048								0	0	0	0.42693	1	22735	22735		0.96228	0.33545	1				15142	7081	7060	7094	17915	17915					-0.06206702857457458
KNCRFFTN	8	Unmodified	_KNCRFFTN_					0	0	0			REV__ENST00000581094.5_1_17:30536183-30536465:+|nuORF	REV__ENST00000581094.5_1_17:30536183-30536465:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.1742126345634	3	343.836005	1028.48618	3.4031	0.0011701	1.9483	0.0006699	5.3514	0.00184	344.17189700629916	81.708	0.52676	83.404	83.106	83.633	1.6959					20	16	2	0	0	0	2.3239	1	34183	34183		0.40072	0	1	684110	+		15143	13999	7061	7095	17916	17916					-0.026919234028810024
KNCRFFTNP	9	Unmodified	_KNCRFFTNP_					0	0	0			REV__ENST00000581094.5_1_17:30536183-30536465:+|nuORF	REV__ENST00000581094.5_1_17:30536183-30536465:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.1873046755791	3	376.186926	1125.53895	1.4602	0.0005493	-0.41292	-0.00015533	1.0473	0.00039397	376.18687958175815	49.231	0.31089	51.208	51.038	51.349	1.9772					24	9	4	0	0	0	0.83753	1	20622	20622		0.96228	0.26461	1	2016300	+		15144	13999	7062	7096	17917	17917					-0.018799653400719762
KNDELRKYRWL	11	Unmodified	_KNDELRKYRWL_					0	0	0		tr|A0A553SJN9|A0A553SJN9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17085PE=4SV=1	tr|A0A553SJN9|A0A553SJN9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17085PE=4SV=1	tr|A0A553SJN9|A0A553SJN9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.6180297732353	3	507.615925	1519.82595	2.0459	0.0010385	3.1167	0.0015821	5.1627	0.0026207	507.61690544257567	43.312	0.8575	44.666	43.998	44.855	1.3536					58	27	4	0	0	0	1.0332	1	18119	18119		1.7824	0.3273	1	5836700			15145	16254	7063	7097	17918	17918					0.08682587082944337
KNDKRRIP	8	Unmodified	_KNDKRRIP_					0	0	0			REV__ENSG00000156966|ENST00000287590|B3GNT7	REV__ENSG00000156966|ENST00000287590|B3GNT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8764831423759	3	342.87708	1025.60941	-1.4852	-0.00050925	-1.0281	-0.00035251	-2.5133	-0.00086177	342.8765924607928	40.18	1.0974	40.18	39.544	40.642	0					99	34	4	0	0	0	0.88846	1	16763	16763		3.5965	0.31518	1	8171300	+		15146	10528	7064	7098	17919	17919					0.09763076039894258
KNDLTIQLQ	9	Unmodified	_KNDLTIQLQ_					0	0	0		nc|ENSG00000002079|Q9H6N6|MYH16	nc|ENSG00000002079|Q9H6N6|MYH16	nc|ENSG00000002079|Q9H6N6|MYH16	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2032653689384	3	358.204751	1071.59242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.335	1	21.909	21.409	22.409	1.5748								0	0	0	0.42693	1	8458	8458		1.0715	0	1				15147	7809	7065	7099	17920	17920					0.05949110643427957
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1860534548759	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.193	1	66.193	65.693	66.693	0								0	0	0	0.42693	1	27576	27576		1.0715	0.29493	1		+		15148	11727	7066	7100	17921	17921					0.035122684378507074
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1867858767509	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.494	1	48.824	48.324	49.324	0.33034								0	0	0	0.42693	1	20332	20332		1.0715	0.3738	1		+		15149	11727	7066	7100	17922	17922					0.035122684378507074
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1867553591728	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.663	1	49.993	49.493	50.493	0.33019								0	0	0	0.42693	1	20811	20811		1.0715	0.3738	1		+		15150	11727	7066	7100	17923	17923					0.035122684378507074
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1866027712822	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.715	1	76.021	75.521	76.521	1.3063								0	0	0	0.42693	1	31359	31359		1.0715	0.10919	1		+		15151	11727	7066	7100	17924	17924					0.035122684378507074
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1870910525322	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.225	1	77.519	77.019	78.019	1.2938								0	0	0	0.42693	1	31999	31999		1.0715	0.10919	1		+		15152	11727	7066	7100	17925	17925					0.035122684378507074
KNDTLPKGQ	9	Unmodified	_KNDTLPKGQ_					0	0	0			REV__ENSG00000198707|ENST00000552810|CEP290	REV__ENSG00000198707|ENST00000552810|CEP290	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1869384646416	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.461	1	74.271	73.771	74.771	1.8101								0	0	0	0.42693	1	30401	30401		1.0715	0.10919	1		+		15153	11727	7066	7100	17926	17926					0.035122684378507074
KNDVYQRRWKK	11	Unmodified	_KNDVYQRRWKK_					0	0	0		sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1;sp|P09695|TRS1_HCMVAProteinHHLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRS1PE=1SV=1	sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1	sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.6183044314384	3	507.61967	1519.83718	2.1265	0.0010794	-3.0903	-0.0015687	-0.96382	-0.00048926	507.6173545957951	45.485	1.4452	45.485	45.091	46.536	0					134	45	5	0	0	0	1.0308	1	19021	19021		1.9275	1.4215	1	9828500			15154	15990	7067	7101	17927	17927					0.09805409177033653
KNDVYQRRWKK	11	Unmodified	_KNDVYQRRWKK_					0	0	0		sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1;sp|P09695|TRS1_HCMVAProteinHHLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRS1PE=1SV=1	sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1	sp|Q6SVX2|TRS1_HCMVMProteinTRS1OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRS1PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.6175720095634	3	507.61967	1519.83718	2.0401	0.0010356	-3.0481	-0.0015473	-1.008	-0.00051167	507.6175963092587	44.819	1.2697	45.146	44.575	45.844	0.32674					127	42	5	0	0	0	1.0369	1	18776	18776		1.1098	0.6038	1	11957000			15155	15990	7067	7101	17928	17928					0.09805409177033653
KNEAGNTRSKW	11	Unmodified	_KNEAGNTRSKW_					0	0	0			REV__ENST00000414066.1_1_10:38107898-38108846:-|nuORF	REV__ENST00000414066.1_1_10:38107898-38108846:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888122439384	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.79	1	40.627	40.127	41.127	1.8366								0	0	0	0.63775	1	16267	16267		1.1098	0.48293	1		+		15156	12930	7068	7102	17929	17929					0.014409171639044871
KNEFMHIC	8	Unmodified	_KNEFMHIC_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1570007205009	3	341.157979	1020.45211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.955	1	57.955	57.455	58.455	0								0	0	0	1.0178	1	24181	24181		0.40072	0	1		+		15157	10507	7069	7103	17930	17930					-0.05730087886149704
KNEFMHIC	8	Unmodified	_KNEFMHIC_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1561462283134	3	341.157979	1020.45211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.573	1	80.573	80.073	81.073	0								0	0	0	1.0178	1	33551	33551		0.40072	0	1		+		15158	10507	7069	7103	17931	17931					-0.05730087886149704
KNEFMHIC	8	Unmodified	_KNEFMHIC_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1579772830009	3	341.157979	1020.45211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.737	1	80.737	80.237	81.237	0								0	0	0	1.0178	1	33619	33619		0.40072	0	1		+		15159	10507	7069	7103	17932	17932					-0.05730087886149704
KNEFMHIC	8	Unmodified	_KNEFMHIC_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1576415896416	3	341.157979	1020.45211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.852	1	80.852	80.352	81.352	0								0	0	0	1.0178	1	33667	33667		0.40072	0	1		+		15160	10507	7069	7103	17933	17933					-0.05730087886149704
KNEFMHIC	8	Unmodified	_KNEFMHIC_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1574890017509	3	341.157979	1020.45211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.988	1	45.315	44.815	45.815	0.32674								0	0	0	1.0178	1	18891	18891		0.40072	0	1		+		15161	10507	7069	7103	17934	17934					-0.05730087886149704
KNEKLHRIT	9	Unmodified	_KNEKLHRIT_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2286559939384	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.612	1	80.903	80.403	81.403	0.29056								0	0	0	0.42693	1	33700	33700		0.96228	0	1		+		15162	14686	7070	7104	17935	17935					0.09851614382819207
KNEKLHRIT	9	Unmodified	_KNEKLHRIT_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2276794314384	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.39	1	81.115	80.615	81.615	1.7253								0	0	0	0.42693	1	33297	33297		0.96228	0	1		+		15163	14686	7070	7104	17936	17936					0.09851614382819207
KNELLGLILN	10	Unmodified	_KNELLGLILN_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion;ENST00000523488.5_1_8:3008913-3253839:-|nuORF	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2296325564384	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.843	1	61.843	61.343	62.343	0								0	0	0	0.66222	1	25784	25784		0.69767	0	1				15164	379	7071	7105	17937	17937					0.11794847091300653
KNELLGLILN	10	Unmodified	_KNELLGLILN_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion;ENST00000523488.5_1_8:3008913-3253839:-|nuORF	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2332336306572	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.971	1	68.293	67.793	68.793	0.32269								0	0	0	0.66222	1	28454	28454		0.69767	0	1				15165	379	7071	7105	17938	17938					0.11794847091300653
KNELLGLILN	10	Unmodified	_KNELLGLILN_					0	0	0		nc|ENSG00000183117|Q96PZ7-4|CSMD1;nc|ENSG00000183117|Q96PZ7-3|CSMD1;CSMD1|p.Y2458Efs*21|1|0.08|ENSG00000183117|chr8:3087202-3087203|-/TGAAAATTTC|frameshift_variant;nc|ENSG00000183117|Q96PZ7-2|CSMD1;ENSG00000183117|ENST00000635120|CSMD1;TRIM28-CSMD1|1|fusion;ENST00000523488.5_1_8:3008913-3253839:-|nuORF	nc|ENSG00000183117|Q96PZ7-4|CSMD1	nc|ENSG00000183117|Q96PZ7-4|CSMD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2344543337822	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.052	1	84.313	83.813	84.813	0.26083								0	0	0	0.66222	1	35156	35156		0.69767	0	1				15166	379	7071	7105	17939	17939					0.11794847091300653
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_A02_01	1	350.1822692751884	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.958	1	45.958	45.458	46.458	0								0	0	0	0.42693	1	19223	19223		2.7352	0	1				15167	821	7072	7106	17940	17940					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1818115115166	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.423	1	46.752	46.252	47.252	0.32899								0	0	0	0.42693	1	19479	19479		1.0715	0	1				15168	821	7072	7106	17941	17941					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1812011599541	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.544	1	46.874	46.374	47.374	0.33034								0	0	0	0.42693	1	19529	19529		1.0715	0	1				15169	821	7072	7106	17942	17942					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1807739138603	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.969	1	51.297	50.797	51.797	0.32824								0	0	0	0.42693	1	21353	21353		1.0715	0	1				15170	821	7072	7106	17943	17943					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.1820556521416	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.354	1	45.719	45.219	46.219	1.3653								0	0	0	0.42693	1	18594	18594		2.7352	0	1				15171	821	7072	7106	17944	17944					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.1815673708916	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.081	1	46.446	45.946	46.946	1.3653								0	0	0	0.42693	1	18893	18893		1.0715	0	1				15172	821	7072	7106	17945	17945					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.1819640994072	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.538	1	45.482	44.982	45.982	1.9438								0	0	0	0.42693	1	18256	18256		1.0715	0	1				15173	821	7072	7106	17946	17946					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.1816284060478	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.829	1	45.773	45.273	46.273	1.9438								0	0	0	0.42693	1	18377	18377		1.0715	0	1				15174	821	7072	7106	17947	17947					-0.0022064314998715417
KNENSKSLE	9	Unmodified	_KNENSKSLE_					0	0	0		ENSG00000067248|ENST00000251636|DHX29;ENST00000504778.5_1_5:54579003-54603452:-|nuORF;DHX29|p.G1201Dfs*33|1|0.04|ENSG00000067248|chr5:55262856-55262857|-/GTAAT|frameshift_variant	ENSG00000067248|ENST00000251636|DHX29	ENSG00000067248|ENST00000251636|DHX29	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.1816589236259	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.562	1	46.522	46.022	47.022	1.9596								0	0	0	0.42693	1	18677	18677		1.0715	0	1				15175	821	7072	7106	17948	17948					-0.0022064314998715417
KNFAHFTA	8	Unmodified	_KNFAHFTA_					0	0	0			REV__nc|ENSG00000100784|O75582-3|RPS6KA5	REV__nc|ENSG00000100784|O75582-3|RPS6KA5	MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2413513064384	2	468.240327	934.466101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.943	1	81.943	81.443	82.443	0								0	0	0	1.0178	1	34134	34134		0.69038	0	1		+		15176	9005	7073	7107	17949	17949					-0.003753510712044772
KNFDEATAR	9	Unmodified	_KNFDEATAR_					0	0	0			REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	REV__nc|ENSG00000062598|Q96JJ3-3|ELMO2	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1784240603447	3	351.177084	1050.50942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.594	1	57.917	57.417	58.417	0.32298								0	0	0	0.42693	1	24149	24149		0.96228	0	1		+		15177	8655	7074	7108	17950	17950					-0.013812060845793894
KNFDMVIVY	9	Unmodified	_KNFDMVIVY_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7928344607353	2	564.791535	1127.56852	1.5456	0.00087295	1.0919	0.00061667	2.6375	0.0014896	564.7919874434757	54.011	0.57298	55.415	55.198	55.771	1.4048					34	18	2	0	0	0	0.037098	4	22603	22555;22603;22648;22691		78.728	38.771	1	9200800			15178	1163	7075	7109	17951;17952;17953;17954	17952					0.00983553885407673
KNFDMVIVY	9	Unmodified	_KNFDMVIVY_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7924682497978	2	564.791535	1127.56852	0.71228	0.00040229	0.9833	0.00055536	1.6956	0.00095765	564.7921331429767	53.485	0.55075	55.455	55.264	55.815	1.9697					33	17	2	0	0	0	0.037098	3	22411	22411;22449;22494		78.728	38.771	1	11100000			15179	1163	7075	7109	17955;17956;17957	17955					0.00983553885407673
KNFFKIRKLRL	11	Unmodified	_KNFFKIRKLRL_					0	0	0		ENST00000453185.5_1_1:29522511-29533334:-|nuORF	ENST00000453185.5_1_1:29522511-29533334:-|nuORF	ENST00000453185.5_1_1:29522511-29533334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	366.4902526736259	4	366.489682	1461.92962	1.3597	0.00049832	1.0472	0.00038377	2.4069	0.00088209	366.74081280483654	38.102	0.32839	38.409	38.287	38.615	0.30685					31	23	2	0	0	0	1.0395	2	16022	16022;16059		0.08335	0	1	2086400			15180	6626	7076	7110	17958;17959	17958					0.21713538981271086
KNFHKLRWVH	10	Unmodified	_KNFHKLRWVH_					0	0	0			REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	REV__ENST00000477401.5_1_7:14660999-14880939:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	455.1915466189384	3	455.594796	1363.76256	1.7159	0.00078178	-2.1107	-0.00096165	-0.3948	-0.00017987	455.59362691373656	95.532	0.40112	95.532	95.291	95.692	0					28	13	3	0	0	0	0.1256	1	39904	39904		0.69767	0.19171	1	1561900	+		15181	9978	7077	7111	17960	17960					0.09522691156325891
KNFIHILVG	9	Unmodified	_KNFIHILVG_					0	0	0			REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5474731326103	3	347.54656	1039.61785	1.4801	0.0005144	-0.45321	-0.00015751	1.0269	0.00035689	347.5464481081264	40.12	0.76942	41.982	41.402	42.171	1.8624					49	24	4	0	0	0	0.76103	1	16862	16862		4.897	0.36815	1	4356500	+		15182	13085	7078	7112	17961	17961					0.09962629956544333
KNFIHILVG	9	Unmodified	_KNFIHILVG_					0	0	0			REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	347.54656	1039.61785	1.3633	0.0004738	1.025	0.00035622	2.3882	0.00083002	347.54674367684504	41.808	0.31071	42.129	41.917	42.227	0.32058	0.12401	0.00085784	NaN	4.897	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1534400	+		15183	13085	7078	7112							0.09962629956544333
KNFIHILVG	9	Unmodified	_KNFIHILVG_					0	0	0			REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	REV__ENST00000441170.1_1_4:118496255-118496735:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	347.54656	1039.61785	1.0713	0.00037233	0.17828	6.1961E-05	1.2496	0.00043429	347.54658677751496	40.593	0.46365	41.904	41.637	42.1	1.3102	-0.10141	-2.4939E-05	NaN	4.897	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3595000	+		15184	13085	7078	7112							0.09962629956544333
KNFIKKIK	8	Unmodified	_KNFIKKIK_					0	0	0			REV__tr|A0A7D7A0I1|A0A7D7A0I1_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10050PE=4SV=1	REV__tr|A0A7D7A0I1|A0A7D7A0I1_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10050PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2303344607353	3	340.230572	1017.66989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.638	1	46.969	46.469	47.469	0.33034								0	0	0	1.0178	1	19568	19568		0.40072	0	1		+		15185	15809	7079	7113	17962	17962					0.1617579337028019
KNFILKRLFWK	11	Unmodified	_KNFILKRLFWK_					0	0	0		XPOT-C12orf56|1|fusion;nc|nan|Q8IXR9-2|C12orf56;XPOT-C12orf56|2|fusion;ENSG00000185306|ENST00000543942|C12orf56	XPOT-C12orf56|1|fusion	XPOT-C12orf56|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	374.0998412966728	4	373.984233	1491.90782	0.48366	0.00018088	-0.31568	-0.00011806	0.16798	6.2822E-05	373.9841155073396	29.323	0.30635	31.122	30.898	31.204	1.7987					21	9	3	0	0	0	0.14606	1	12235	12235		0	0	1	1319700			15186	4739	7080	7114	17963	17963					0.18154734232689407
KNFLASTG	8	Unmodified	_KNFLASTG_					0	0	0			REV__tr|A0A7D6VRK0|A0A7D6VRK0_9CLOTRibulose-phosphate3-epimeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02455PE=4SV=1	REV__tr|A0A7D6VRK0|A0A7D6VRK0_9CLOTRibulose-phosphate3-epimeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	419.2279540896416	2	419.226885	836.439217	2.3257	0.00097498	-0.73199	-0.00030687	1.5937	0.00066811	419.2266728392682	72.77	0.51089	73.095	72.829	73.34	0.32494					31	15	3	0	0	0	0.89051	1	30437	30437		2.3027	0	1	1512400	+		15187	15413	7081	7115	17964	17964					0.01445540317627092
KNFLFLLLL	9	Unmodified	_KNFLFLLLL_					0	0	0		ENST00000526343.5_1_11:102100776-102101010:+|nuORF	ENST00000526343.5_1_11:102100776-102101010:+|nuORF	ENST00000526343.5_1_11:102100776-102101010:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2428466677666	3	374.242477	1119.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.795	1	34.62	34.12	35.12	1.8246								0	0	0	0.42693	1	13745	13745		2.4985	1.8008	1				15188	7123	7082	7116	17965	17965					0.1505383082728713
KNFMSDPKLDA	11	Unmodified	_KNFMSDPKLDA_					0	0	0		tr|A0A7D6VQS0|A0A7D6VQS0_9CLOTPTSsystemmannitol-specificEIICBcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_02735PE=4SV=1	tr|A0A7D6VQS0|A0A7D6VQS0_9CLOTPTSsystemmannitol-specificEIICBcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_02735PE=4SV=1	tr|A0A7D6VQS0|A0A7D6VQS0_9CLOTPTSsystemmannitol-specificEIICBcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_02735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	421.8780395388603	3	422.544667	1264.61217	1.6452	0.00069517	1.1593	0.00048988	2.8045	0.001185	422.8797800779826	69.574	0.31263	69.896	69.721	70.034	0.32224					38	9	6	0	0	0	0.14606	1	29123	29123		6.2344	1.3373	1	2239300			15189	16806	7083	7117	17966	17966					-0.009548814081199453
KNFSEPGK	8	Unmodified	_KNFSEPGK_					0	0	0			REV__tr|A0A553SK34|A0A553SK34_NIACISuccinatedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_18045PE=4SV=1	REV__tr|A0A553SK34|A0A553SK34_NIACISuccinatedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_18045PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7415038943291	2	453.737617	905.460681	2.4918	0.0011306	3.7889	0.0017192	6.2807	0.0028498	453.73999081564443	64.66	0.5711	64.987	64.591	65.162	0.32689					42	17	3	0	0	0	0.8909	1	27109	27109		2.0598	0	1	1314500	+		15190	14932	7084	7118	17967	17967					0.004169253463373934
KNGAGLRPR	9	Unmodified	_KNGAGLRPR_					0	0	0			REV__ENSG00000126749|ENST00000599672|EMG1	REV__ENSG00000126749|ENST00000599672|EMG1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	323.4725829958916	3	323.529792	967.567546	-2.71	-0.00087677	-2.265	-0.00073279	-4.975	-0.0016096	323.529114678201	27.124	0.36655	27.124	26.892	27.259	0					41	11	4	0	0	0	0.11851	1	11381	11381		2.2828	0.63015	1	50652000	+		15191	9700	7085	7119	17968	17968					0.08246520351372055
KNGAPHGA	8	Unmodified	_KNGAPHGA_					0	0	0		nc|ENSG00000248290|Q16473|TNXA	nc|ENSG00000248290|Q16473|TNXA	nc|ENSG00000248290|Q16473|TNXA	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.1968261599541	2	376.195919	750.377286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.731	1	71.055	70.555	71.555	0.32359								0	0	0	1.0178	1	29609	29609		0.69038	0	1				15192	8007	7086	7120	17969	17969					-0.00788766310859046
KNGDEDCQ	8	Unmodified	_KNGDEDCQ_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;LARP1|p.T545Ifs*7|1|0.05|ENSG00000155506|chr5:154802154-154802155|-/T|frameshift_variant;nc|ENSG00000155506|Q6PKG0-3|LARP1;LARP1|p.R163Qfs*23|1|0.29|ENSG00000155506|chr5:154792775-154792776|-/A|frameshift_variant	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2488586306572	3	303.451996	907.33416	-2.0099	-0.0006099	-3.2528	-0.00098706	-5.2626	-0.001597	303.4509885857906	50.937	0.37845	50.937	50.66	51.039	0					13	11	2	0	0	0	2.3239	1	21182	21182		0.40072	0	1	260730			15193	3422	7087	7121	17970	17970					-0.12321368941115907
KNGGAPCA	8	Unmodified	_KNGGAPCA_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.1696349978447	2	359.171056	716.327559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.678	1	68.001	67.501	68.501	0.32269								0	0	0	1.0178	1	28335	28335		0.69038	0	1				15194	7965	7088	7122	17971	17971					-0.04195217311189481
KNGGAPCA	8	Unmodified	_KNGGAPCA_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.1704894900322	2	359.171056	716.327559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.659	1	68.981	68.481	69.481	0.32224								0	0	0	1.0178	1	28741	28741		0.69038	0	1				15195	7965	7088	7122	17972	17972					-0.04195217311189481
KNGGAPCA	8	Unmodified	_KNGGAPCA_					0	0	0		nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	nc|ENSG00000197558|A2VEC9|SSPOP	MSMS	GG20161007_CRH_Patient100_W632_01	3	359.1704589724541	2	359.171056	716.327559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.631	1	69.008	68.508	69.508	1.3778								0	0	0	1.0178	1	28373	28373		0.69038	0	1				15196	7965	7088	7122	17973	17973					-0.04195217311189481
KNGKGKGKFR	10	Unmodified	_KNGKGKGKFR_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	373.8973266482353	3	373.896363	1118.66726	2.4646	0.00092149	0.60931	0.00022782	3.0739	0.0011493	373.896249525687	88.228	0.5611	88.462	88.228	88.789	0.23471					50	17	4	0	0	0	0.89803	2	36984	36984;37035		0.62683	0.22611	1	16759000	+		15197	13068	7089	7123	17974;17975	17974					0.11267337965296065
KNGKGKGKFR	10	Unmodified	_KNGKGKGKFR_					0	0	0			REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	REV__ENST00000438469.2_1_1:146553889-146554591:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	373.8978149294853	3	373.896363	1118.66726	3.7387	0.0013979	1.3064	0.00048845	5.0451	0.0018864	373.89647876171597	87.537	0.52817	88.629	88.335	88.863	1.0918					47	16	4	0	0	0	0.89803	2	36910	36910;36958		0.62683	0.22611	1	13593000	+		15198	13068	7089	7123	17976;17977	17976					0.11267337965296065
KNGKKIVL	8	Unmodified	_KNGKKIVL_					0	0	0		tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1283447146416	3	300.539405	898.596387	0.036499	1.0969E-05	-0.85133	-0.00025586	-0.81483	-0.00024489	300.53915689740484	25.611	0.40056	26.871	26.649	27.049	1.2594					22	12	2	0	0	0	2.3239	1	10704	10704		0.40072	0	1	1954600			15199	16245	7090	7124	17978	17978					0.14303244927782544
KNGKKIVL	8	Unmodified	_KNGKKIVL_					0	0	0		tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	tr|A0A553SJE4|A0A553SJE4_NIACIAcyl-CoAdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16650PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1274291872978	3	300.539405	898.596387	-0.045928	-1.3803E-05	-1.4806	-0.00044497	-1.5265	-0.00045877	300.5389926131871	25.481	0.24852	27.198	27.119	27.368	1.7167					10	7	2	0	0	0	2.3239	1	10681	10681		0.40072	0	1	777640			15200	16245	7090	7124	17979	17979					0.14303244927782544
KNGKLIIPPV	10	Unmodified	_KNGKLIIPPV_					0	0	0		ENSG00000148429|ENST00000609104|USP6NL;nc|ENSG00000148429|Q92738-2|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2375976443291	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.943	1	93.943	93.443	94.443	0								0	0	0	0.66222	1	39259	39259		0.69767	0.42865	1				15201	3211	7091	7125	17980	17980					0.15527758679127146
KNGMIITS	8	Unmodified	_KNGMIITS_					0	0	0		tr|A0A7D6VMG6|A0A7D6VMG6_9CLOTDihydropyrimidinaseOS=ClostridiumintestinaleOX=36845GN=hydAPE=3SV=1	tr|A0A7D6VMG6|A0A7D6VMG6_9CLOTDihydropyrimidinaseOS=ClostridiumintestinaleOX=36845GN=hydAPE=3SV=1	tr|A0A7D6VMG6|A0A7D6VMG6_9CLOTDihydropyrimidinaseOS=ClostridiumintestinaleOX=36845GN=hydAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	432.2371703982353	2	432.236396	862.458238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.27	1	105.32	104.82	105.82	0.056801								0	0	0	1.0178	1	44588	44588		2.3027	0	1				15202	16712	7092	7126	17981	17981					0.021507536170247477
KNGNGGPG	8	Unmodified	_KNGNGGPG_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;CTNND1|p.K408Nfs*21|1|0.04|ENSG00000198561|chr11:57801999-57802000|-/TAGTGTGACAGACTCACCCTCTAGTGGTTGTT|frameshift_variant	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.6714050173759	2	350.672277	699.330001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.932	1	49.262	48.762	49.762	0.33023								0	0	0	1.0178	1	20513	20513		0.69038	0	1				15203	16028	7093	7127	17982	17982					-0.03169045581853425
KNGPAGIG	8	Unmodified	_KNGPAGIG_					0	0	0			REV__ENST00000526977.5_1_8:145651442-145652328:-|nuORF	REV__ENST00000526977.5_1_8:145651442-145652328:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	357.2814208865166	2	357.20067	712.386788	2.8366	0.0010132	2.9633	0.0010585	5.7999	0.0020717	357.20206448519343	105.9	0.28885	106.07	105.9	106.19	0.16679					19	14	2	0	0	0	2.3239	1	45147	45147		0.79363	0	1	5707000	+		15204	10616	7094	7128	17983	17983					0.019090019746727194
KNGPLGLLR	9	Unmodified	_KNGPLGLLR_					0	0	0		ENST00000373115.4_1_10:73770493-73770862:+|nuORF	ENST00000373115.4_1_10:73770493-73770862:+|nuORF	ENST00000373115.4_1_10:73770493-73770862:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	323.2068054080009	3	323.206426	966.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.632	1	64.632	64.132	65.132	0								0	0	0	0.42693	1	26940	26940		1.0715	0	1				15205	6155	7095	7129	17984	17984					0.11281459296719731
KNGRECGG	8	Unmodified	_KNGRECGG_					0	0	0		ENST00000263253.8_1_22:41488962-41489055:+|nuORF	ENST00000263253.8_1_22:41488962-41489055:+|nuORF	ENST00000263253.8_1_22:41488962-41489055:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.6920349001884	2	410.690144	819.365735	2.0035	0.00082281	0.67827	0.00027856	2.6817	0.0011014	410.6901964480485	67.075	0.55733	67.398	67.094	67.651	0.32269					47	18	3	0	0	0	0.89178	1	28153	28153		0.69038	0	1	26729000			15206	5642	7096	7130	17985	17985					-0.051173313965023226
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2495605349541	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.894	1	28.894	28.394	29.394	0								0	0	0	0.42693	1	12094	12094		1.1933	0.41681	1		+		15207	12725	7097	7131	17986	17986					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2513305544853	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.662	1	39.662	39.162	40.162	0								0	0	0	0.42693	1	16623	16623		1.0715	0.29493	1		+		15208	12725	7097	7131	17987	17987					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2512084841728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.94	1	57.94	57.44	58.44	0								0	0	0	0.42693	1	24175	24175		0.96228	0.26461	1		+		15209	12725	7097	7131	17988	17988					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2509948611259	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.99	1	64.99	64.49	65.49	0								0	0	0	0.42693	1	27086	27086		0.96228	0.26461	1		+		15210	12725	7097	7131	17989	17989					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2505370974541	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.645	1	69.645	69.145	70.145	0								0	0	0	0.42693	1	29002	29002		0.96228	0.3991	1		+		15211	12725	7097	7131	17990	17990					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2502929568291	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.747	1	77.747	77.247	78.247	0								0	0	0	0.42693	1	32367	32367		1.0715	0.3738	1		+		15212	12725	7097	7131	17991	17991					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2512695193291	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.995	1	77.995	77.495	78.495	0								0	0	0	0.42693	1	32469	32469		1.0715	0.29493	1		+		15213	12725	7097	7131	17992	17992					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2501708865166	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.43	1	79.43	78.93	79.93	0								0	0	0	0.42693	1	33073	33073		1.0715	0.10919	1		+		15214	12725	7097	7131	17993	17993					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2508117556572	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.356	1	80.356	79.856	80.856	0								0	0	0	0.42693	1	33460	33460		0.96228	0.3991	1		+		15215	12725	7097	7131	17994	17994					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2506896853447	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.677	1	80.677	80.177	81.177	0								0	0	0	0.42693	1	33594	33594		0.96228	0.3991	1		+		15216	12725	7097	7131	17995	17995					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2523376345634	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.821	1	80.821	80.321	81.321	0								0	0	0	0.42693	1	33654	33654		0.96228	0.26461	1		+		15217	12725	7097	7131	17996	17996					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2520324587822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.907	1	84.907	84.407	85.407	0								0	0	0	0.42693	1	35380	35380		1.0715	0.29493	1		+		15218	12725	7097	7131	17997	17997					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2515441775322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.275	1	88.275	87.775	88.775	0								0	0	0	0.42693	1	36902	36902		0.96228	0.3991	1		+		15219	12725	7097	7131	17998	17998					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2520324587822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.006	1	91.006	90.506	91.506	0								0	0	0	0.42693	1	38035	38035		1.0715	0.10919	1		+		15220	12725	7097	7131	17999	17999					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2513915896416	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.153	1	91.153	90.653	91.653	0								0	0	0	0.42693	1	38096	38096		1.0715	0.10919	1		+		15221	12725	7097	7131	18000	18000					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2514831423759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.311	1	91.311	90.811	91.811	0								0	0	0	0.42693	1	38163	38163		1.0715	0.10919	1		+		15222	12725	7097	7131	18001	18001					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2502319216728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.692	1	91.692	91.192	92.192	0								0	0	0	0.42693	1	38318	38318		1.0715	0.10919	1		+		15223	12725	7097	7131	18002	18002					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2490112185478	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.505	1	32.799	32.299	33.299	0.29431								0	0	0	0.42693	1	13643	13643		0.96228	0.3991	1		+		15224	12725	7097	7131	18003	18003					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508422732353	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.204	1	37.508	37.008	38.008	0.30497								0	0	0	0.42693	1	15647	15647		1.0715	0.80244	1		+		15225	12725	7097	7131	18004	18004					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2515441775322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.899	1	69.221	68.721	69.721	0.32224								0	0	0	0.42693	1	28840	28840		0.96228	0.33545	1		+		15226	12725	7097	7131	18005	18005					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2512084841728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.249	1	69.571	69.071	70.071	0.32224								0	0	0	0.42693	1	28986	28986		0.96228	0.26461	1		+		15227	12725	7097	7131	18006	18006					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2525207400322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.568	1	72.893	72.393	73.393	0.32494								0	0	0	0.42693	1	30362	30362		1.0715	0.10919	1		+		15228	12725	7097	7131	18007	18007					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2518188357353	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.098	1	80.398	79.898	80.898	0.30047								0	0	0	0.42693	1	33484	33484		1.0715	0.56551	1		+		15229	12725	7097	7131	18008	18008					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2522765994072	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.559	1	81.84	81.34	82.34	0.2802								0	0	0	0.42693	1	34101	34101		1.0715	0.10919	1		+		15230	12725	7097	7131	18009	18009					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2515746951103	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.07	1	83.34	82.84	83.84	0.27029								0	0	0	0.42693	1	34741	34741		1.0715	0.10919	1		+		15231	12725	7097	7131	18010	18010					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2520629763603	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.236	1	84.496	83.996	84.996	0.26083								0	0	0	0.42693	1	35232	35232		1.0715	0.10919	1		+		15232	12725	7097	7131	18011	18011					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2524291872978	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.404	1	84.665	84.165	85.165	0.26083								0	0	0	0.42693	1	35300	35300		1.0715	0.10919	1		+		15233	12725	7097	7131	18012	18012					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2516967654228	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.941	1	85.202	84.702	85.702	0.26083								0	0	0	0.42693	1	35518	35518		1.0715	0.10919	1		+		15234	12725	7097	7131	18013	18013					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2512084841728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.473	1	85.725	85.225	86.225	0.25227								0	0	0	0.42693	1	35740	35740		1.0715	0.10919	1		+		15235	12725	7097	7131	18014	18014					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2518188357353	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.755	1	86.007	85.507	86.507	0.25227								0	0	0	0.42693	1	35858	35858		1.0715	0.10919	1		+		15236	12725	7097	7131	18015	18015					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2527648806572	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.77	1	88.005	87.505	88.505	0.23471								0	0	0	0.42693	1	36803	36803		1.0715	0.10919	1		+		15237	12725	7097	7131	18016	18016					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2524597048759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.156	1	88.39	87.89	88.89	0.23471								0	0	0	0.42693	1	36962	36962		1.0715	0.10919	1		+		15238	12725	7097	7131	18017	18017					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2501403689384	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.618	1	88.853	88.353	89.353	0.23471								0	0	0	0.42693	1	37155	37155		1.0715	0.10919	1		+		15239	12725	7097	7131	18018	18018					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2524291872978	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.18	1	89.404	88.904	89.904	0.22359								0	0	0	0.42693	1	37382	37382		1.0715	0.3738	1		+		15240	12725	7097	7131	18019	18019					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2514221072197	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.127	1	91.317	90.817	91.817	0.19042								0	0	0	0.42693	1	38175	38175		1.0715	0.56551	1		+		15241	12725	7097	7131	18020	18020					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2514831423759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.27	1	91.46	90.96	91.96	0.19042								0	0	0	0.42693	1	38232	38232		1.0715	0.10919	1		+		15242	12725	7097	7131	18021	18021					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2506286501884	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.419	1	92.588	92.088	93.088	0.16835								0	0	0	0.42693	1	38702	38702		1.0715	0.10919	1		+		15243	12725	7097	7131	18022	18022					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2520324587822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.486	1	93.637	93.137	94.137	0.15023								0	0	0	0.42693	1	39135	39135		1.0715	0.10919	1		+		15244	12725	7097	7131	18023	18023					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2503234744072	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.534	1	29.814	29.314	30.314	1.2798								0	0	0	0.42693	1	11963	11963		1.0715	0.10919	1		+		15245	12725	7097	7131	18024	18024					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2516357302666	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.576	1	36.851	36.351	37.351	1.2746								0	0	0	0.42693	1	14935	14935		1.0715	0.80244	1		+		15246	12725	7097	7131	18025	18025					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2503234744072	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.553	1	37.829	37.329	38.329	1.2762								0	0	0	0.42693	1	15344	15344		1.0715	0.3738	1		+		15247	12725	7097	7131	18026	18026					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513000369072	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.119	1	50.508	50.008	51.008	1.3889								0	0	0	0.42693	1	20562	20562		0.96228	0.45632	1		+		15248	12725	7097	7131	18027	18027					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2531616091728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.757	1	51.149	50.649	51.649	1.3911								0	0	0	0.42693	1	20830	20830		1.0715	0.10919	1		+		15249	12725	7097	7131	18028	18028					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2503845095634	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.299	1	63.717	63.217	64.217	1.4177								0	0	0	0.42693	1	26123	26123		0.96228	0.33545	1		+		15250	12725	7097	7131	18029	18029					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2512084841728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.317	1	71.671	71.171	72.171	1.3536								0	0	0	0.42693	1	29512	29512		1.0715	0.10919	1		+		15251	12725	7097	7131	18030	18030					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2518798708916	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.148	1	80.415	79.915	80.915	1.2668								0	0	0	0.42693	1	33223	33223		1.0715	0.10919	1		+		15252	12725	7097	7131	18031	18031					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2512390017509	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.957	1	82.19	81.69	82.69	1.2332								0	0	0	0.42693	1	33986	33986		1.0715	0.10919	1		+		15253	12725	7097	7131	18032	18032					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2529785037041	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.714	1	89.77	89.27	90.27	1.0562								0	0	0	0.42693	1	37398	37398		0.96228	0.3991	1		+		15254	12725	7097	7131	18033	18033					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2530700564384	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.95	1	90.97	90.47	91.47	1.0199								0	0	0	0.42693	1	37904	37904		1.0715	0.10919	1		+		15255	12725	7097	7131	18034	18034					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2525207400322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.993	1	92.929	92.429	93.429	0.93623								0	0	0	0.42693	1	38746	38746		1.0715	0.50829	1		+		15256	12725	7097	7131	18035	18035					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2524597048759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.302	1	93.238	92.738	93.738	0.93623								0	0	0	0.42693	1	38871	38871		1.0715	0.50829	1		+		15257	12725	7097	7131	18036	18036					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2520019412041	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.397	1	93.333	92.833	93.833	0.93623								0	0	0	0.42693	1	38909	38909		1.0715	0.50829	1		+		15258	12725	7097	7131	18037	18037					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505676150322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.653	1	41.515	41.015	42.015	1.8624								0	0	0	0.42693	1	16626	16626		1.0715	0.3738	1		+		15259	12725	7097	7131	18038	18038					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510864138603	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.187	1	48.157	47.657	48.657	1.9703								0	0	0	0.42693	1	19350	19350		1.0715	0.10919	1		+		15260	12725	7097	7131	18039	18039					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505981326103	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.007	1	50.984	50.484	51.484	1.9772								0	0	0	0.42693	1	20528	20528		1.0715	0.10919	1		+		15261	12725	7097	7131	18040	18040					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2501708865166	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.624	1	52.6	52.1	53.1	1.9753								0	0	0	0.42693	1	21212	21212		0.96228	0	1		+		15262	12725	7097	7131	18041	18041					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2497741580009	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.258	1	56.227	55.727	56.727	1.9684								0	0	0	0.42693	1	22729	22729		0.96228	0.18574	1		+		15263	12725	7097	7131	18042	18042					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2519103884697	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.405	1	75.201	74.701	75.701	1.7962								0	0	0	0.42693	1	30791	30791		1.0715	0.10919	1		+		15264	12725	7097	7131	18043	18043					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520934939384	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.742	1	77.516	77.016	78.016	1.7734								0	0	0	0.42693	1	31777	31777		1.0715	0.10919	1		+		15265	12725	7097	7131	18044	18044					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2501098513603	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.656	1	79.407	78.907	79.907	1.7514								0	0	0	0.42693	1	32569	32569		1.0715	0.10919	1		+		15266	12725	7097	7131	18045	18045					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2516052126884	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.436	1	83.131	82.631	83.631	1.6959								0	0	0	0.42693	1	34166	34166		1.0715	0.10919	1		+		15267	12725	7097	7131	18046	18046					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2503539919853	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.445	1	85.083	84.583	85.583	1.6379								0	0	0	0.42693	1	35000	35000		1.0715	0.10919	1		+		15268	12725	7097	7131	18047	18047					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2522460818291	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.708	1	88.203	87.703	88.703	1.4953								0	0	0	0.42693	1	36556	36556		1.0715	0.10919	1		+		15269	12725	7097	7131	18048	18048					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2523071169853	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.675	1	89.171	88.671	89.671	1.4953								0	0	0	0.42693	1	36961	36961		1.0715	0.10919	1		+		15270	12725	7097	7131	18049	18049					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2524597048759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.728	1	90.175	89.675	90.675	1.4467								0	0	0	0.42693	1	37389	37389		1.0715	0.10919	1		+		15271	12725	7097	7131	18050	18050					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2522155642509	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.032	1	90.479	89.979	90.979	1.4467								0	0	0	0.42693	1	37512	37512		1.0715	0.50829	1		+		15272	12725	7097	7131	18051	18051					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520324587822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.927	1	91.331	90.831	91.831	1.4045								0	0	0	0.42693	1	37883	37883		1.0715	0.10919	1		+		15273	12725	7097	7131	18052	18052					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2515136599541	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.076	1	91.48	90.98	91.98	1.4045								0	0	0	0.42693	1	37944	37944		1.0715	0.10919	1		+		15274	12725	7097	7131	18053	18053					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2524902224541	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.572	1	92.899	92.399	93.399	1.3269								0	0	0	0.42693	1	38561	38561		1.0715	0.10919	1		+		15275	12725	7097	7131	18054	18054					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2521240115166	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.721	1	93.048	92.548	93.548	1.3269								0	0	0	0.42693	1	38621	38621		1.0715	0.10919	1		+		15276	12725	7097	7131	18055	18055					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2521850466728	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.981	1	93.308	92.808	93.808	1.3269								0	0	0	0.42693	1	38727	38727		1.0715	0.56551	1		+		15277	12725	7097	7131	18056	18056					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2519103884697	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.118	1	93.445	92.945	93.945	1.3269								0	0	0	0.42693	1	38782	38782		1.0715	0.10919	1		+		15278	12725	7097	7131	18057	18057					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2513915896416	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.269	1	93.596	93.096	94.096	1.3269								0	0	0	0.42693	1	38842	38842		1.0715	0.10919	1		+		15279	12725	7097	7131	18058	18058					0.13866287788096088
KNGRRRPRR	9	Unmodified	_KNGRRRPRR_					0	0	0			REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	REV__ENST00000376772.7_1_6:30035001-30035094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2532836794853	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.689	1	96.091	95.591	96.591	0.40208								0	0	0	0.42693	1	40261	40261		0.96228	0.18574	1		+		15280	12725	7097	7131	18059	18059					0.13866287788096088
KNGVLIGP	8	Unmodified	_KNGVLIGP_					0	0	0			REV__ENST00000535977.5_1_16:677649-677925:+|nuORF	REV__ENST00000535977.5_1_16:677649-677925:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2489196658134	2	399.247621	796.480688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.082	1	62.412	61.912	62.912	0.32974								0	0	0	1.0178	1	26011	26011		2.5775	0	1		+		15281	13748	7098	7132	18060	18060					0.07430721076957525
KNGVVGAG	8	Unmodified	_KNGVVGAG_					0	0	0		ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.2010986208916	2	351.20067	700.386788	-0.83205	-0.00029222	-0.70634	-0.00024807	-1.5384	-0.00054028	351.2003861379763	60.138	0.46751	60.138	59.944	60.412	0					29	15	2	0	0	0	0.89051	1	25158	25158		2.3027	0	1	7660700			15282	5516	7099	7133	18061	18061					0.024610019746660328
KNGVVGAG	8	Unmodified	_KNGVVGAG_					0	0	0		ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2000610232353	2	351.20067	700.386788	1.9466	0.00068364	-3.4503	-0.0012117	-1.5037	-0.0005281	351.1996147812751	59.919	0.50711	60.248	59.966	60.473	0.32809					37	16	3	0	0	0	0.89051	2	25105	25105;25152		2.3027	0	1	5248000			15283	5516	7099	7133	18062;18063	18062					0.024610019746660328
KNGVVGAG	8	Unmodified	_KNGVVGAG_					0	0	0		ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	ENST00000216034.5_1_22:39080062-39080293:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	351.20067	700.386788	1.3511	0.00047451	-3.6663	-0.0012876	-2.3152	-0.00081309	351.199364961348	58.54	0.50914	60.509	60.214	60.723	1.969	0.20144	-0.00068891	NaN	2.3027	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5848300			15284	5516	7099	7133							0.024610019746660328
KNGWMEEPP	9	Unmodified	_KNGWMEEPP_					0	0	0		tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	tr|A0A553SSI3|A0A553SSI3_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_02965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2539855837822	3	363.16742	1086.48043	1.6452	0.00059747	2.5918	0.00094125	4.2369	0.0015387	363.16877488915037	70.019	0.21709	71.373	71.243	71.46	1.3536					9	6	2	0	0	0	0.11941	1	29342	29342		1.0715	0.61312	1	954290			15285	16615	7100	7134	18064	18064					-0.059350667052285644
KNHCYYEPK	9	Unmodified	_KNHCYYEPK_					0	0	0		tr|A0A553SSH9|A0A553SSH9_NIACICellwallhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_03010PE=4SV=1	tr|A0A553SSH9|A0A553SSH9_NIACICellwallhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_03010PE=4SV=1	tr|A0A553SSH9|A0A553SSH9_NIACICellwallhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_03010PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5183898806572	3	394.518453	1180.53353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.752	1	32.752	32.252	33.252	0								0	0	0	0.42693	1	13722	13722		0.96228	0.33545	1				15286	16613	7101	7135	18065	18065					-0.04951688922574249
KNHEIATEF	9	Unmodified	_KNHEIATEF_					0	0	0			REV__ENSG00000148606|ENST00000372371|POLR3A	REV__ENSG00000148606|ENST00000372371|POLR3A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2541076540947	3	363.517218	1087.52982	-0.24229	-8.8077E-05	3.4779	0.0012643	3.2356	0.0011762	363.5195436803567	83.951	0.18134	83.951	83.876	84.058	0					6	5	2	0	0	0	0.11909	1	35021	35021		2.4985	0.84587	1	480270	+		15287	10351	7102	7136	18066	18066					-0.0104403542475211
KNHHKTKW	8	Unmodified	_KNHHKTKW_					0	0	0		ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS	ENSG00000116729|ENST00000262348|WLS	ENSG00000116729|ENST00000262348|WLS	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2018920779228	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.227	1	77.227	76.727	77.727	0								0	0	0	1.0178	1	32149	32149		0.40072	0	1				15288	1984	7103	7137	18067	18067					0.047508068684237514
KNHLLEAVY	9	Unmodified	_KNHLLEAVY_					0	0	0		tr|A0A553SIF3|A0A553SIF3_NIACICardiolipinsynthaseN-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14725PE=4SV=1	tr|A0A553SIF3|A0A553SIF3_NIACICardiolipinsynthaseN-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14725PE=4SV=1	tr|A0A553SIF3|A0A553SIF3_NIACICardiolipinsynthaseN-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14725PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2541076540947	3	362.869591	1085.58694	-0.26326	-9.5529E-05	2.248	0.00081572	1.9847	0.00072019	362.87071093407974	83.981	0.3994	83.981	83.752	84.151	0					17	12	2	0	0	0	0.11909	1	35021	35021		2.4985	1.427	1	1106400			15289	16193	7104	7138	18068	18068					0.04757431851612637
KNHPKLKKKVL	11	Unmodified	_KNHPKLKKKVL_					0	0	0		ENST00000447107.1_1_14:64821486-64821564:-|nuORF	ENST00000447107.1_1_14:64821486-64821564:-|nuORF	ENST00000447107.1_1_14:64821486-64821564:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.0323974490166	4	333.976408	1331.87652	0.67822	0.00022651	-1.3705	-0.00045773	-0.69231	-0.00023122	333.9755704231014	32.089	0.92403	32.383	31.881	32.805	0.294					63	29	3	0	0	0	0.14606	1	13506	13506		0.08335	0	1	1570300			15290	6586	7105	7139	18069	18069					0.2238616119859671
KNHQPPHH	8	Unmodified	_KNHQPPHH_					0	0	0			REV__CYP1A1|p.A370Sfs*48|1|0.1|ENSG00000140465|chr15:74721257-74721258|-/T|frameshift_variant	REV__CYP1A1|p.A370Sfs*48|1|0.1|ENSG00000140465|chr15:74721257-74721258|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1718627810478	3	332.170375	993.489296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.057	1	60.477	59.977	60.977	1.4196								0	0	0	1.0178	1	24762	24762		0.40072	0	1		+		15291	8416	7106	7140	18070	18070					-0.007709122338724228
KNIAAKLKITE	11	Unmodified	_KNIAAKLKITE_					0	0	0		tr|A0A553SFF2|A0A553SFF2_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08755PE=4SV=1	tr|A0A553SFF2|A0A553SFF2_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08755PE=4SV=1	tr|A0A553SFF2|A0A553SFF2_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08755PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	308.1709777712822	4	307.946045	1227.75507	1.3112	0.00040378	-1.9763	-0.00060858	-0.66506	-0.0002048	307.94584985260207	48.635	0.68132	50.612	50.236	50.917	1.9772					27	21	2	0	0	0	0.14606	1	20476	20476		0.40827	0.17242	1	427850			15292	16055	7107	7141	18071	18071					0.15030494045413434
KNIERMKHLKT	11	Unmodified	_KNIERMKHLKT_					0	0	0		ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	ENSG00000138075|ENST00000405322|ABCG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6101257205009	3	466.606373	1396.79729	3.2842	0.0015324	3.3666	0.0015709	6.6508	0.0031033	466.6077737302514	87.191	1.6586	87.434	87.17	88.829	0.24387					94	55	3	0	0	0	1.037	1	36687	36687		0.36667	0.27183	1	5112000			15293	2811	7108	7142	18072	18072					0.11476146182144475
KNIHKLEL	8	Unmodified	_KNIHKLEL_					0	0	0			REV__nc|ENSG00000159625|Q8IY82-2|DRC7	REV__nc|ENSG00000159625|Q8IY82-2|DRC7	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2069274783134	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.832	1	75.157	74.657	75.657	0.32464								0	0	0	1.0178	1	31300	31300		0.40072	0	1		+		15294	10578	7109	7143	18073	18073					0.10006039576830972
KNIKALLLV	9	Unmodified	_KNIKALLLV_					0	0	0		tr|A0A553SJ73|A0A553SJ73_NIACICadherin-likebetasandwichdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16270PE=4SV=1	tr|A0A553SJ73|A0A553SJ73_NIACICadherin-likebetasandwichdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16270PE=4SV=1	tr|A0A553SJ73|A0A553SJ73_NIACICadherin-likebetasandwichdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9031555056572	3	337.902344	1010.6852	1.2096	0.00040872	0.43137	0.00014576	1.641	0.00055448	337.90267796260537	50.894	4.1874	51.222	50.667	54.854	0.32824					299	136	4	0	0	0	0.82114	1	22707	22707		2.4985	0.59211	1	73757000			15295	16231	7110	7144	18074	18074					0.18028660167465205
KNIKETNP	8	Unmodified	_KNIKETNP_					0	0	0		tr|A0A7D6VPU8|A0A7D6VPU8_9CLOTbeta-glucosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20450PE=4SV=1	tr|A0A7D6VPU8|A0A7D6VPU8_9CLOTbeta-glucosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20450PE=4SV=1	tr|A0A7D6VPU8|A0A7D6VPU8_9CLOTbeta-glucosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20450PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1781188845634	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80	1	81.251	80.751	81.751	1.2512								0	0	0	1.0178	1	33580	33580		1.6526	0	1				15296	16774	7111	7145	18075	18075					0.03988883409124355
KNIKKWAKP	9	Unmodified	_KNIKKWAKP_					0	0	0		tr|A0A7D6VUS0|A0A7D6VUS0_9CLOTAldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08110PE=3SV=1	tr|A0A7D6VUS0|A0A7D6VUS0_9CLOTAldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08110PE=3SV=1	tr|A0A7D6VUS0|A0A7D6VUS0_9CLOTAldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08110PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1017028689384	3	371.569476	1111.6866	1.6768	0.00062305	1.5437	0.00057361	3.2206	0.0011967	371.5698573270808	79.973	0.5998	80.274	79.909	80.509	0.30047					46	18	3	0	0	0	0.11941	1	33408	33408		1.0715	0.67075	1	1797300			15297	16953	7112	7146	18076	18076					0.1352229425619953
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.112	1	39.112	38.612	39.612	0								0	0	0	0.66222	1	16393	16393		0.69767	0.19171	1		+		15298	15388	7113	7147	18077	18077					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8891174197197	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.378	1	58.378	57.878	58.878	0								0	0	0	0.66222	1	24352	24352		0.69767	0.19171	1		+		15299	15388	7113	7147	18078	18078					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890563845634	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.81	1	61.81	61.31	62.31	0								0	0	0	0.66222	1	25770	25770		0.69767	0.24315	1		+		15300	15388	7113	7147	18079	18079					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889037966728	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.633	1	63.633	63.133	64.133	0								0	0	0	0.66222	1	26527	26527		0.69767	0.24315	1		+		15301	15388	7113	7147	18080	18080					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889953494072	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.862	1	63.862	63.362	64.362	0								0	0	0	0.66222	1	26626	26626		0.69767	0	1		+		15302	15388	7113	7147	18081	18081					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8893920779228	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.252	1	64.252	63.752	64.752	0								0	0	0	0.66222	1	26787	26787		0.69767	0.19171	1		+		15303	15388	7113	7147	18082	18082					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890563845634	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.398	1	65.398	64.898	65.898	0								0	0	0	0.66222	1	27255	27255		0.69767	0.24315	1		+		15304	15388	7113	7147	18083	18083					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889343142509	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.527	1	65.527	65.027	66.027	0								0	0	0	0.66222	1	27307	27307		0.69767	0.24315	1		+		15305	15388	7113	7147	18084	18084					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8894836306572	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.718	1	65.718	65.218	66.218	0								0	0	0	0.66222	1	27383	27383		0.69767	0.46182	1		+		15306	15388	7113	7147	18085	18085					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8893920779228	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.29	1	66.29	65.79	66.79	0								0	0	0	0.66222	1	27615	27615		0.69767	0.24315	1		+		15307	15388	7113	7147	18086	18086					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.994	1	67.994	67.494	68.494	0								0	0	0	0.66222	1	28318	28318		0.69767	0.24315	1		+		15308	15388	7113	7147	18087	18087					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8891784548759	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.81	1	68.81	68.31	69.31	0								0	0	0	0.66222	1	28655	28655		0.69767	0.24315	1		+		15309	15388	7113	7147	18088	18088					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886291384697	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.775	1	69.775	69.275	70.275	0								0	0	0	0.66222	1	29055	29055		0.69767	0.24315	1		+		15310	15388	7113	7147	18089	18089					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890258669853	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.584	1	71.584	71.084	72.084	0								0	0	0	0.66222	1	29811	29811		0.69767	0.24315	1		+		15311	15388	7113	7147	18090	18090					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883544802666	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.767	1	71.767	71.267	72.267	0								0	0	0	0.66222	1	29886	29886		0.69767	0.24315	1		+		15312	15388	7113	7147	18091	18091					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.728	1	72.728	72.228	73.228	0								0	0	0	0.66222	1	30280	30280		0.69767	0.24315	1		+		15313	15388	7113	7147	18092	18092					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.778	1	82.778	82.278	83.278	0								0	0	0	0.66222	1	34487	34487		0.69767	0.24315	1		+		15314	15388	7113	7147	18093	18093					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8898498415947	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.571	1	83.571	83.071	84.071	0								0	0	0	0.66222	1	34824	34824		0.69767	0.24315	1		+		15315	15388	7113	7147	18094	18094					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8892394900322	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.639	1	91.639	91.139	92.139	0								0	0	0	0.66222	1	38296	38296		0.69767	0.46182	1		+		15316	15388	7113	7147	18095	18095					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8900024294853	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.508	1	95.508	95.008	96.008	0								0	0	0	0.66222	1	39920	39920		0.69767	0.24315	1		+		15317	15388	7113	7147	18096	18096					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.908	1	43.23	42.73	43.73	0.32249								0	0	0	0.66222	1	18022	18022		0.69767	0.24315	1		+		15318	15388	7113	7147	18097	18097					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8892700076103	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.254	1	50.583	50.083	51.083	0.32824								0	0	0	0.66222	1	21055	21055		0.69767	0.19171	1		+		15319	15388	7113	7147	18098	18098					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887206912041	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.871	1	56.192	55.692	56.692	0.32088								0	0	0	0.66222	1	23396	23396		0.69767	0.24315	1		+		15320	15388	7113	7147	18099	18099					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8895141482353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.588	1	56.909	56.409	57.409	0.32103								0	0	0	0.66222	1	23725	23725		0.69767	0	1		+		15321	15388	7113	7147	18100	18100					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893920779228	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.731	1	58.054	57.554	58.554	0.32298								0	0	0	0.66222	1	24205	24205		0.69767	0.19171	1		+		15322	15388	7113	7147	18101	18101					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8894225955009	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.339	1	58.662	58.162	59.162	0.32298								0	0	0	0.66222	1	24452	24452		0.69767	0.24315	1		+		15323	15388	7113	7147	18102	18102					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8897277712822	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.522	1	58.845	58.345	59.345	0.32298								0	0	0	0.66222	1	24528	24528		0.69767	0.24315	1		+		15324	15388	7113	7147	18103	18103					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891784548759	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.601	1	60.929	60.429	61.429	0.32809								0	0	0	0.66222	1	25393	25393		0.69767	0.24315	1		+		15325	15388	7113	7147	18104	18104					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8897277712822	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.885	1	61.213	60.713	61.713	0.32809								0	0	0	0.66222	1	25510	25510		0.69767	0	1		+		15326	15388	7113	7147	18105	18105					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891174197197	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.09	1	62.419	61.919	62.919	0.32974								0	0	0	0.66222	1	26014	26014		0.69767	0.24315	1		+		15327	15388	7113	7147	18106	18106					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8896362185478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.428	1	62.758	62.258	63.258	0.32974								0	0	0	0.66222	1	26156	26156		0.69767	0.24315	1		+		15328	15388	7113	7147	18107	18107					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8892700076103	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.208	1	64.537	64.037	65.037	0.32899								0	0	0	0.66222	1	26899	26899		0.69767	0	1		+		15329	15388	7113	7147	18108	18108					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891174197197	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.535	1	68.857	68.357	69.357	0.32224								0	0	0	0.66222	1	28688	28688		0.69767	0.19171	1		+		15330	15388	7113	7147	18109	18109					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8895751833916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.606	1	84.867	84.367	85.367	0.26083								0	0	0	0.66222	1	35382	35382		0.69767	0.24315	1		+		15331	15388	7113	7147	18110	18110					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.629	1	97.719	97.219	98.219	0.090881								0	0	0	0.66222	1	40849	40849		0.69767	0.19171	1		+		15332	15388	7113	7147	18111	18111					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888427615166	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.604	1	56.009	55.509	56.509	1.4048								0	0	0	0.66222	1	22852	22852		0.69767	0.24315	1		+		15333	15388	7113	7147	18112	18112					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885070681572	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.142	1	58.556	58.056	59.056	1.4145								0	0	0	0.66222	1	23951	23951		0.69767	0.24315	1		+		15334	15388	7113	7147	18113	18113					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.537	1	59.955	59.455	60.455	1.4181								0	0	0	0.66222	1	24542	24542		0.69767	0.24315	1		+		15335	15388	7113	7147	18114	18114					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8890563845634	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.307	1	32.122	31.622	32.622	1.8151								0	0	0	0.66222	1	12705	12705		0.69767	0.46182	1		+		15336	15388	7113	7147	18115	18115					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884460330009	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.881	1	57.849	57.349	58.349	1.9684								0	0	0	0.66222	1	23434	23434		0.69767	0.19171	1		+		15337	15388	7113	7147	18116	18116					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8890258669853	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.499	1	58.467	57.967	58.967	1.9684								0	0	0	0.66222	1	23695	23695		0.69767	0.24315	1		+		15338	15388	7113	7147	18117	18117					0.011222740571838585
KNILFWSYGY	10	Unmodified	_KNILFWSYGY_					0	0	0			REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	REV__tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8904907107353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.211	1	96.613	96.113	97.113	0.40208								0	0	0	0.66222	1	40473	40473		0.69767	0.24315	1		+		15339	15388	7113	7147	18118	18118					0.011222740571838585
KNILIVHGT	9	Unmodified	_KNILIVHGT_					0	0	0		tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2074157595634	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.154	1	64.154	63.654	64.654	0								0	0	0	0.42693	1	26747	26747		1.0715	0.10919	1				15340	16842	7114	7148	18119	18119					0.10006039576853709
KNILIVHGT	9	Unmodified	_KNILIVHGT_					0	0	0		tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	tr|A0A7D6VRS2|A0A7D6VRS2_9CLOTIron-containingalcoholdehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06860PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2072936892509	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.54	1	70.862	70.362	71.362	0.32224								0	0	0	0.42693	1	29529	29529		1.0715	0.10919	1				15341	16842	7114	7148	18120	18120					0.10006039576853709
KNILREIRR	9	Unmodified	_KNILREIRR_					0	0	0			REV__nc|ENSG00000204209|Q9UER7-3|DAXX	REV__nc|ENSG00000204209|Q9UER7-3|DAXX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.9239684939384	3	399.922801	1196.74657	4.485	0.0017936	-2.0391	-0.0008155	2.4458	0.00097815	399.9220334010135	89.353	0.56226	90.757	90.456	91.019	1.4045					49	17	4	0	0	0	0.85019	1	37698	37698		0.23584	0	1	6213100	+		15342	11773	7115	7149	18121	18121					0.15606984919440947
KNIPYSGQ	8	Unmodified	_KNIPYSGQ_					0	0	0		tr|A0A7D6ZWQ1|A0A7D6ZWQ1_9CLOTSolute-bindingproteinfamily5domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19970PE=3SV=1	tr|A0A7D6ZWQ1|A0A7D6ZWQ1_9CLOTSolute-bindingproteinfamily5domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19970PE=3SV=1	tr|A0A7D6ZWQ1|A0A7D6ZWQ1_9CLOTSolute-bindingproteinfamily5domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19970PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7406494021416	2	453.737617	905.460681	3.0987	0.001406	1.8053	0.00081913	4.904	0.0022251	453.7394979476344	62.337	0.43503	63.755	63.556	63.992	1.4177					40	13	4	0	0	0	0.88587	1	26193	26193		5.2307	0	1	1620900			15343	17176	7116	7150	18122	18122					0.004169253463373934
KNIQAAKLF	9	Unmodified	_KNIQAAKLF_					0	0	0		tr|A0A553SKC4|A0A553SKC4_NIACIG5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18330PE=4SV=1	tr|A0A553SKC4|A0A553SKC4_NIACIG5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18330PE=4SV=1	tr|A0A553SKC4|A0A553SKC4_NIACIG5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18330PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2382995486259	3	344.878198	1031.61277	-0.10425	-3.5952E-05	1.1434	0.00039432	1.0391	0.00035837	344.8785253313395	19.02	0.74253	20.544	20.038	20.781	1.5237					30	23	2	0	0	0	0.11944	1	7887	7887		0.96228	0.80295	1	556390			15344	16284	7117	7151	18123	18123					0.09822326093876654
KNIRQIPNVKG	11	Unmodified	_KNIRQIPNVKG_					0	0	0		tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.9268676638603	3	422.926211	1265.7568	1.2049	0.0005096	-0.48342	-0.00020445	0.72151	0.00030515	422.925867430836	91.652	1.0068	91.652	91.405	92.411	0					54	31	3	0	0	0	1.0365	2	38305	38305;38505		1.2148	0.14337	1	657220			15345	16768	7118	7152	18124;18125	18124					0.1345554785400509
KNIRRRIFY	9	Unmodified	_KNIRRRIFY_					0	0	0			REV__ENSG00000101890|ENST00000218006|GUCY2F	REV__ENSG00000101890|ENST00000218006|GUCY2F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1956664919853	4	317.195191	1264.75166	0.7908	0.00025084	1.75	0.0005551	2.5408	0.00080594	317.19560125039726	36.489	0.63893	36.79	36.544	37.183	0.30197					150	45	4	0	0	0	0.82114	1	15328	15328		2.4985	0.24576	1	36396000	+		15346	9048	7119	7153	18126	18126					0.12987288782073847
KNITKTFKI	9	Unmodified	_KNITKTFKI_					0	0	0		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109;nc|ENSG00000156535|Q6YHK3-3|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	364.8961974978447	3	364.89737	1091.67028	0.096765	3.5309E-05	-3.2693	-0.001193	-3.1725	-0.0011576	364.89610771406535	86.261	0.41867	86.261	86.008	86.427	0					35	13	3	0	0	0	0.71759	1	35949	35949		6.6304	4.3476	1	9657100			15347	3452	7120	7154	18127	18127					0.12811168299458586
KNIVVVQYGT	10	Unmodified	_KNIVVVQYGT_					0	0	0			REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2179138064384	3	374.21688	1119.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.823	1	82.103	81.603	82.603	0.2802								0	0	0	0.66222	1	34212	34212		0.69767	0	1		+		15348	15631	7121	7155	18128	18128					0.07377987540144204
KNIWLIDAN	9	Unmodified	_KNIWLIDAN_					0	0	0			REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2538024783134	3	362.869591	1085.58694	2.1706	0.00078766	0.21295	7.7271E-05	2.3836	0.00086493	362.87017257197806	83.811	0.39479	84.081	83.832	84.227	0.27029					26	12	3	0	0	0	0.11941	1	35081	35081		1.0715	0.8646	1	1140500	+		15349	9072	7122	7156	18129	18129					0.04757431851612637
KNIWLIDAN	9	Unmodified	_KNIWLIDAN_					0	0	0			REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2544433474541	3	362.869591	1085.58694	2.3551	0.00085459	-1.5249	-0.00055332	0.83024	0.00030127	362.86955403218366	82.691	0.33685	84.362	84.173	84.51	1.67					16	10	2	0	0	0	0.11941	1	34634	34634		1.0715	0.29493	1	817220	+		15350	9072	7122	7156	18130	18130					0.04757431851612637
KNKAPRGPR	9	Unmodified	_KNKAPRGPR_					0	0	0			REV__ENSG00000166987|ENST00000355673|MBD6	REV__ENSG00000166987|ENST00000355673|MBD6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.3125488162041	2	512.312149	1022.60975	2.9041	0.0014878	-3.091	-0.0015836	-0.18685	-9.5727E-05	512.3107390745266	100.57	0.12697	100.64	100.57	100.69	0.072716					5	3	2	0	0	0	0.83753	1	42116	42116		1.8442	1.0506	1	637360	+		15351	10852	7123	7157	18131	18131					0.09934495759750916
KNKAPRGPR	9	Unmodified	_KNKAPRGPR_					0	0	0			REV__ENSG00000166987|ENST00000355673|MBD6	REV__ENSG00000166987|ENST00000355673|MBD6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	512.312149	1022.60975	1.4584	0.00074714	-1.1111	-0.00056924	0.34726	0.00017791	512.3120735759867	100.67	0.15181	100.67	100.57	100.72	0	0.015201	0.0012024	NaN	1.8442	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	889660	+		15352	10852	7123	7157							0.09934495759750916
KNKAPRGPR	9	Unmodified	_KNKAPRGPR_					0	0	0			REV__ENSG00000166987|ENST00000355673|MBD6	REV__ENSG00000166987|ENST00000355673|MBD6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	512.312149	1022.60975	2.9041	0.0014878	-3.091	-0.0015836	-0.18685	-9.5727E-05	512.3107390745266	100.57	0.12697	100.64	100.57	100.69	0.072716	-0.015201	-0.00082629	NaN	1.8442	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	637360	+		15353	10852	7123	7157							0.09934495759750916
KNKAVLMP	8	Unmodified	_KNKAVLMP_					0	0	0		nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;ENSG00000168769|ENST00000380013|TET2	nc|ENSG00000168769|Q6N021-2|TET2	nc|ENSG00000168769|Q6N021-2|TET2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	300.8499938845634	3	300.849363	899.526258	-2.2779	-0.0006853	3.017	0.00090765	0.73905	0.00022234	300.8510254395387	41.388	0.41838	41.388	41.145	41.563	0					41	12	4	0	0	0	0.8782	1	17346	17346		10.074	3.3508	1	1578100			15354	4052	7124	7158	18132	18132					0.07247623267687686
KNKAVLMP	8	Unmodified	_KNKAVLMP_					0	0	0		nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;ENSG00000168769|ENST00000380013|TET2	nc|ENSG00000168769|Q6N021-2|TET2	nc|ENSG00000168769|Q6N021-2|TET2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	300.8504211306572	3	300.849363	899.526258	1.0418	0.00031341	0.020857	6.2748E-06	1.0626	0.00031969	300.8499986176415	39.197	0.37812	40.493	40.29	40.668	1.2961					36	11	4	0	0	0	0.88351	1	16448	16448		6.7232	2.7788	1	2856900			15355	4052	7124	7158	18133	18133					0.07247623267687686
KNKAVLMP	8	Unmodified	_KNKAVLMP_					0	0	0		nc|ENSG00000168769|Q6N021-2|TET2;nc|ENSG00000168769|Q6N021-3|TET2;ENSG00000168769|ENST00000380013|TET2	nc|ENSG00000168769|Q6N021-2|TET2	nc|ENSG00000168769|Q6N021-2|TET2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	300.849363	899.526258	0.99279	0.00029868	1.7489	0.00052617	2.7417	0.00082485	300.8503924923898	40.396	0.37687	40.709	40.444	40.821	0.31263	0.14764	0.0014161	NaN	6.7232	24	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669300			15356	4052	7124	7158							0.07247623267687686
KNKEKLIK	8	Unmodified	_KNKEKLIK_					0	0	0		ENSG00000171320|ENST00000305188|ESCO2;ENST00000524293.1_1_8:27633031-27634707:+|nuORF	ENSG00000171320|ENST00000305188|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2230712771416	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.244	1	88.479	87.979	88.979	0.23471								0	0	0	1.0178	1	37000	37000		0.40072	0	1				15357	4184	7125	7159	18134	18134					0.1442289912799879
KNKHLFII	8	Unmodified	_KNKHLFII_					0	0	0			REV__RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	REV__RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2175170779228	3	338.214922	1011.62294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.018	1	44.342	43.842	44.842	0.32389								0	0	0	1.0178	1	18478	18478		1.6526	0	1		+		15358	8806	7126	7160	18135	18135					0.11758933819135109
KNKHPLSLL	9	Unmodified	_KNKHPLSLL_					0	0	0			REV__ENSG00000100030|ENST00000215832|MAPK1	REV__ENSG00000100030|ENST00000215832|MAPK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3265258669853	2	525.326934	1048.63931	2.2484	0.0011812	-3.5868	-0.0018842	-1.3384	-0.0007031	525.3253053235943	91.983	0.40959	91.983	91.693	92.103	0					26	12	3	0	0	0	0.83213	1	38464	38464		2.0598	0.21551	1	1911000	+		15359	8961	7127	7161	18136	18136					0.1169401498523257
KNKIGQVKQ	9	Unmodified	_KNKIGQVKQ_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;nc|ENSG00000082805|Q8IUD2-2|ERC1;nc|ENSG00000082805|Q8IUD2-4|ERC1;nc|ENSG00000082805|Q8IUD2-3|ERC1;WNK1-ERC1|2|fusion;SIPA1L3-ERC1|2|fusion	ERC1-CACNA1C|37|fusion;nc|ENSG00000082805|Q8IUD2-3|ERC1	ERC1-CACNA1C|37|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	347.5471679568291	3	348.217102	1041.62948	-1.1878	-0.00041361	-0.56107	-0.00019537	-1.7489	-0.00060898	348.21754729924123	43.422	0.44241	43.422	43.272	43.715	0					16	13	2	0	0	0	0.11909	1	18190	18190		2.4985	0.65425	1	327740			15360	7578;7833	7128	7162	18137	18137					0.11032826979840138
KNKIKRPR	8	Unmodified	_KNKIKRPR_					0	0	0		ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	ENSG00000163781|ENST00000260810|TOPBP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3494750857353	2	520.345992	1038.67743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.55	1	104.71	104.21	105.21	0.16055								0	0	0	1.0178	1	44317	44317		0.69038	0	1				15361	3723	7129	7163	18138	18138					0.15963945690555192
KNKILIFFIA	10	Unmodified	_KNKILIFFIA_					0	0	0		tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	302.0810119509697	4	302.44568	1205.75362	-2.1	-0.00063514	-1.1205	-0.00033889	-3.2205	-0.00097403	302.69642611504366	54.513	0.11572	54.513	54.448	54.563	0					5	3	2	0	0	0	0.12561	1	22700	22700		0.13989	0	1	268480			15362	16789	7130	7164	18139	18139					0.1589690474731924
KNKITPDAR	9	Unmodified	_KNKITPDAR_					0	0	0			REV__ENST00000476963.1_1_10:90582700-90583195:-|nuORF	REV__ENST00000476963.1_1_10:90582700-90583195:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2067443728447	3	348.204974	1041.59309	-0.46992	-0.00016363	4.149	0.0014447	3.6791	0.0012811	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.77876	1	12864	12864		4.1895	1.691	1	6459500	+		15363	10431	7131	7165	18140	18140					0.073959500831279
KNKKAKIVKIF	11	Unmodified	_KNKKAKIVKIF_					0	0	0			REV__ENSG00000163563|ENST00000368141|MNDA	REV__ENSG00000163563|ENST00000368141|MNDA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	330.1564208865166	4	329.974871	1315.87038	1.3403	0.00044228	3.185	0.001051	4.5253	0.0014932	330.22638253068806	48.737	0.15462	50.714	50.637	50.792	1.9772					6	4	2	0	0	0	0.14606	1	20443	20443		0.08335	0.08335	1	226070	+		15364	10693	7132	7166	18141	18141					0.2250764296707075
KNKKGFKKKR	10	Unmodified	_KNKKGFKKKR_					0	0	0			REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	REV__nc|ENSG00000198758|Q8TE67-2|EPS8L3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	316.1747924685478	4	316.210841	1260.81426	1.0441	0.00033015	4.2325	0.0013384	5.2766	0.0016685	316.4628731612925	42.383	0.34439	44.304	44.133	44.478	1.9211					12	10	2	0	0	0	0.12561	1	17715	17715		0.13989	0.04505	1	283260	+		15365	11735	7133	7167	18142	18142					0.194284348502606
KNKKGLLV	8	Unmodified	_KNKKGLLV_					0	0	0			REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1281310915947	3	300.539405	898.596387	0.25838	7.7654E-05	0.15234	4.5786E-05	0.41073	0.00012344	300.539449528819	26.831	0.4007	27.093	26.834	27.235	0.26173					23	12	2	0	0	0	2.3239	1	11233	11233		0	0	1	2435700	+		15366	14233	7134	7168	18143	18143					0.1430324492781665
KNKKGLLV	8	Unmodified	_KNKKGLLV_					0	0	0			REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1273986697197	3	300.539405	898.596387	0.27468	8.2551E-05	1.7834	0.000536	2.0581	0.00061855	300.5399880613258	27.083	0.21893	27.344	27.235	27.454	0.26173					12	6	2	0	0	0	2.3239	1	11315	11315		0	0	1	783020	+		15367	14233	7134	7168	18144	18144					0.1430324492781665
KNKKGLLV	8	Unmodified	_KNKKGLLV_					0	0	0			REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1278259158134	3	300.539405	898.596387	0.0020004	6.0121E-07	0.5709	0.00017158	0.5729	0.00017218	300.5396446399101	25.941	0.27834	27.201	27.08	27.358	1.2594					13	8	2	0	0	0	2.3239	1	10899	10899		0	0	1	699710	+		15368	14233	7134	7168	18145	18145					0.1430324492781665
KNKKGLLV	8	Unmodified	_KNKKGLLV_					0	0	0			REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	REV__INHBA|p.K261N|1|0.16|ENSG00000122641|chr7:41690148-41690148|C/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	300.539405	898.596387	-2.8493	-0.00085634	3.6952	0.0011105	0.84585	0.00025421	300.5406121583521	27.449	0.62928	27.449	27.231	27.86	0	0.052406	0.00078783	NaN	0	31	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2397800	+		15369	14233	7134	7168							0.1430324492781665
KNKKKKLKKK	10	Unmodified	_KNKKKKLKKK_					0	0	0		ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;nc|ENSG00000096063|Q96SB4-4|SRPK1;nc|ENSG00000135250|P78362|SRPK2;ENSG00000135250|ENST00000393651|SRPK2	ENSG00000096063|ENST00000373825|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3060180544853	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.506	1	96.611	96.111	97.111	0.105								0	0	0	0.66255	1	40382	40382		0.13989	0.13989	1				15370	1192	7135	7169	18146	18146					0.27310751578238524
KNKKKKRFWK	10	Unmodified	_KNKKKKRFWK_					0	0	0		ENST00000494045.5_1_9:136278026-136283036:-|nuORF;nc|ENSG00000148300|Q9GZR2-2|REXO4;ENSG00000148300|ENST00000371942|REXO4	ENST00000494045.5_1_9:136278026-136283036:-|nuORF	ENST00000494045.5_1_9:136278026-136283036:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.7263671755791	4	348.475304	1389.87211	0.32227	0.0001123	2.2179	0.00077288	2.5401	0.00088518	348.4760079941895	29.243	1.058	31.042	30.206	31.264	1.7987					97	34	4	0	0	0	0.89803	3	12002	12002;12100;12296		0.13989	0.04505	1	4132000			15371	3202	7136	7170	18147;18148;18149	18147					0.1927669677565973
KNKKSLRAK	9	Unmodified	_KNKKSLRAK_					0	0	0			REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|62|3|sense	REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|62|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2360107302666	3	358.236497	1071.68766	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.076	1	48.046	47.546	48.546	1.9703								0	0	0	0.42693	1	19303	19303		0.23584	0	1		+		15372	14336	7137	7171	18150	18150					0.15468508625099275
KNKKWLSNN	9	Unmodified	_KNKKWLSNN_					0	0	0			REV__ENST00000506539.5_1_5:65018131-65088776:+|nuORF	REV__ENST00000506539.5_1_5:65018131-65088776:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3177978396416	2	566.317097	1130.61964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.24	1	103.4	102.9	103.9	0.16445								0	0	0	0.42693	1	43500	43500		1.8442	0.36234	1		+		15373	13540	7138	7172	18151	18151					0.05955638974455724
KNKLLALMAA	10	Unmodified	_KNKLLALMAA_					0	0	0		tr|A0A7D7A3A3|A0A7D7A3A3_9CLOTPermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00710PE=3SV=1	tr|A0A7D7A3A3|A0A7D7A3A3_9CLOTPermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00710PE=3SV=1	tr|A0A7D7A3A3|A0A7D7A3A3_9CLOTPermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00710PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.2246581912041	3	358.223088	1071.64744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.089	1	88.089	87.589	88.589	0								0	0	0	0.66227	1	36824	36824		0.62683	0.22611	1				15374	17273	7139	7173	18152	18152					0.11447825910340725
KNKLNIFLH	9	Unmodified	_KNKLNIFLH_					0	0	0			REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	376.5392639040947	3	376.229231	1125.66586	1.3461	0.00050643	-1.963	-0.00073855	-0.61696	-0.00023212	376.22843898621704	45.409	0.25952	46.774	46.628	46.887	1.3653					10	7	2	0	0	0	0.11743	1	19030	19030		7.609	0.88579	1	868010	+		15375	15337	7140	7174	18153	18153					0.10805703876553707
KNKLNIFLH	9	Unmodified	_KNKLNIFLH_					0	0	0			REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	REV__tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	376.5386840701103	3	376.229231	1125.66586	1.6023	0.00060282	1.7329	0.00065198	3.3352	0.0012548	376.2303842916086	44.888	0.32115	46.848	46.639	46.96	1.9596					12	9	2	0	0	0	0.11743	1	18831	18831		4.5289	0	1	889560	+		15376	15337	7140	7174	18154	18154					0.10805703876553707
KNKLNTKHALI	11	Unmodified	_KNKLNTKHALI_					0	0	0			REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	320.7018310427666	4	320.701578	1278.7772	-2.1291	-0.0006828	-0.10216	-3.2762E-05	-2.2312	-0.00071556	320.7023020289313	42.799	1.6488	42.799	42.353	44.002	0					207	52	6	0	0	0	0.98155	7	17941	17824;17863;17941;17980;18032;18110;18149		2.2527	0.16876	1	265120000	+		15377	12061	7141	7175	18155;18156;18157;18158;18159;18160;18161	18157					0.1489671851386447
KNKLNTKHALI	11	Unmodified	_KNKLNTKHALI_					0	0	0			REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7022277712822	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	0.98155	4	17781	17656;17781;17897;17936		2.2527	0.16876	1	296590000	+		15378	12061	7141	7175	18162;18163;18164;18165	18163					0.1489671851386447
KNKLNTKHALI	11	Unmodified	_KNKLNTKHALI_					0	0	0			REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	REV__ENST00000212015.10_1_10:69677007-69677100:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7017089724541	4	320.701578	1278.7772	1.1368	0.00036459	-3.5596	-0.0011416	-2.4227	-0.00077697	320.7013242248906	39.86	1.3301	41.722	41.092	42.422	1.8624					180	42	6	0	0	0	0.98155	5	16701	16584;16623;16701;16779;16818		2.2527	0.16876	1	348870000	+		15379	12061	7141	7175	18166;18167;18168;18169;18170	18168					0.1489671851386447
KNKLPIPFPK	10	Unmodified	_KNKLPIPFPK_					0	0	0		ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENST00000600252.5_1_19:15219832-15221230:+|nuORF	ENST00000600252.5_1_19:15219832-15221230:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5859557986259	3	394.585015	1180.73321	2.6049	0.0010279	0.80221	0.00031654	3.4072	0.0013444	394.58520849026655	59.455	0.53752	61.424	61.225	61.763	1.969					28	17	2	0	0	0	0.88314	1	24955	24955		1.5923	0.81575	1	1121300			15380	7536	7142	7176	18171	18171					0.15007734087521385
KNKLVGQSHLK	11	Unmodified	_KNKLVGQSHLK_					0	0	0			REV__ENSG00000126216|ENST00000261965|TUBGCP3	REV__ENSG00000126216|ENST00000261965|TUBGCP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9236022830009	3	417.922578	1250.7459	4.0522	0.0016935	-1.3374	-0.00055893	2.7148	0.0011346	417.9216999146048	93.625	0.54105	94.496	94.226	94.767	0.87176					51	16	4	0	0	0	1.039	1	39427	39427		0.45452	0.29519	1	8998200	+		15381	9694	7143	7177	18172	18172					0.1305614547973164
KNKLVGQSHLK	11	Unmodified	_KNKLVGQSHLK_					0	0	0			REV__ENSG00000126216|ENST00000261965|TUBGCP3	REV__ENSG00000126216|ENST00000261965|TUBGCP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9232971072197	3	417.922578	1250.7459	3.2346	0.0013518	-0.39616	-0.00016556	2.8385	0.0011863	417.9221265278933	93.288	0.53644	94.565	94.26	94.797	1.277					55	16	5	0	0	0	1.039	1	39197	39197		0.45452	0.29519	1	12902000	+		15382	9694	7143	7177	18173	18173					0.1305614547973164
KNKNFFRIK	9	Unmodified	_KNKNFFRIK_					0	0	0		L1MC5_dup3481|chr4:19631159-19632103:+|1.0071503765471246|0.0011382453961836|9.79|425.0|40|3|sense	L1MC5_dup3481|chr4:19631159-19632103:+|1.0071503765471246|0.0011382453961836|9.79|425.0|40|3|sense	L1MC5_dup3481|chr4:19631159-19632103:+|1.0071503765471246|0.0011382453961836|9.79|425.0|40|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.9076415896416	3	398.90838	1193.70331	2.7339	0.0010906	-3.3978	-0.0013554	-0.66389	-0.00026483	398.90613684317486	91.706	0.3567	91.896	91.755	92.112	0.19042					14	10	2	0	0	0	0.83753	1	38420	38420		0.96228	0	1	819900			15383	7706	7144	7178	18174	18174					0.11420795142180395
KNKNFKKEFK	10	Unmodified	_KNKNFKKEFK_					0	0	0		Harlequin-int_dup373|chr10:84170978-84171612:-|1.3789702665036672|0.2294773950638092|2.59|421.0|15|2|sense	Harlequin-int_dup373|chr10:84170978-84171612:-|1.3789702665036672|0.2294773950638092|2.59|421.0|15|2|sense	Harlequin-int_dup373|chr10:84170978-84171612:-|1.3789702665036672|0.2294773950638092|2.59|421.0|15|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.5906249880791	3	437.590828	1309.75066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.944	1	34.944	34.444	35.444	0								0	0	0	0.66161	1	14646	14646		1.7423	0.52744	1				15384	7611	7145	7179	18175	18175					0.10817029622512564
KNKNIKKKER	10	Unmodified	_KNKNIKKKER_					0	0	0		ENST00000296785.7_1_5:72858805-72861416:-|nuORF	ENST00000296785.7_1_5:72858805-72861416:-|nuORF	ENST00000296785.7_1_5:72858805-72861416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2751953005791	3	429.273611	1284.799	3.0434	0.0013065	-1.0466	-0.00044928	1.9968	0.00085717	429.2730918306361	94.287	0.56697	94.432	94.133	94.7	0.14493					58	17	4	0	0	0	0.89803	1	39529	39529		0.62683	0	1	18456000			15385	5736	7146	7180	18176	18176					0.16799523262397997
KNKNISHV	8	Unmodified	_KNKNISHV_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2732116580009	2	470.272158	938.529764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.574	1	71.574	71.074	72.074	0								0	0	0	1.0178	1	29807	29807		2.0598	0.21551	1				15386	565	7147	7181	18177	18177					0.058040093658974
KNKNKEQRLRA	11	Unmodified	_KNKNKEQRLRA_					0	0	0		ENST00000542074.1_1_11:61197581-61213540:+|nuORF;ENSG00000167985|ENST00000301761|SDHAF2	ENST00000542074.1_1_11:61197581-61213540:+|nuORF	ENST00000542074.1_1_11:61197581-61213540:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	346.2237731814384	4	346.958746	1383.80588	-1.5673	-0.00054377	-2.4269	-0.00084202	-3.9941	-0.0013858	346.9581656898189	97.114	0.5191	97.114	96.988	97.507	0					23	16	2	0	0	0	0.14606	1	40705	40705		0.073264	0.0088572	1	2192000			15387	4004	7148	7182	18178	18178					0.12932836142977067
KNKNKKDL	8	Unmodified	_KNKNKKDL_					0	0	0		tr|A0A7D6ZGC5|A0A7D6ZGC5_9CLOTStageIIsporulationproteinEOS=ClostridiumintestinaleOX=36845GN=spoIIEPE=4SV=1	tr|A0A7D6ZGC5|A0A7D6ZGC5_9CLOTStageIIsporulationproteinEOS=ClostridiumintestinaleOX=36845GN=spoIIEPE=4SV=1	tr|A0A7D6ZGC5|A0A7D6ZGC5_9CLOTStageIIsporulationproteinEOS=ClostridiumintestinaleOX=36845GN=spoIIEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3015930056572	2	494.300916	986.587279	1.6955	0.00083811	-0.029839	-1.4749E-05	1.6657	0.00082336	494.3008275028269	81.541	0.659	81.541	81.195	81.854	0					76	21	5	0	0	0	0.89178	1	33875	33875		0.69038	0	1	190100000			15388	17070	7149	7183	18179	18179					0.09344851571461277
KNKNKQLL	8	Unmodified	_KNKNKQLL_					0	0	0		nc|ENSG00000137965|Q8TCB0-2|IFI44	nc|ENSG00000137965|Q8TCB0-2|IFI44	nc|ENSG00000137965|Q8TCB0-2|IFI44	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.3119689822197	2	493.311284	984.608014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.534	1	38.534	38.034	39.034	0								0	0	0	1.0178	1	16153	16153		2.3027	0.24298	1				15389	7880	7150	7184	18180	18180					0.11509441951136523
KNKNKTKRKKA	11	Unmodified	_KNKNKTKRKKA_					0	0	0			REV__ENST00000306376.9_1_3:185765504-185765672:-|nuORF	REV__ENST00000306376.9_1_3:185765504-185765672:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	336.2021972537041	4	336.720302	1342.8521	1.5052	0.00050682	-0.33845	-0.00011396	1.1667	0.00039286	336.7197217882757	79.008	0.21597	80.743	80.63	80.846	1.735					8	6	2	0	0	0	0.14606	1	33141	33141		0.08335	0	1	221570	+		15390	12338	7151	7185	18181	18181					0.1943890104505499
KNKNQKEI	8	Unmodified	_KNKNQKEI_					0	0	0		tr|A0A7D6VRY3|A0A7D6VRY3_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20755PE=4SV=1	tr|A0A7D6VRY3|A0A7D6VRY3_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20755PE=4SV=1	tr|A0A7D6VRY3|A0A7D6VRY3_9CLOTTniQfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20755PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2917663455009	2	501.290548	1000.56654	2.1373	0.0010714	0.24121	0.00012092	2.3785	0.0011923	501.29054744074784	82.932	0.43146	82.932	82.706	83.138	0					33	13	3	0	0	0	0.89051	2	34498	34498;34599		2.3027	0.4585	1	8973900			15391	16850	7152	7186	18182;18183	18182					0.06628261191792717
KNKPVLNAF	9	Unmodified	_KNKPVLNAF_					0	0	0		ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2	ENSG00000145934|ENST00000518659|TENM2	ENSG00000145934|ENST00000518659|TENM2	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2061950564384	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.754	1	77.754	77.254	78.254	0								0	0	0	0.42693	1	32370	32370		0.96228	0	1				15392	3130	7153	7187	18184	18184					0.08350039576816926
KNKPVLNAF	9	Unmodified	_KNKPVLNAF_					0	0	0		ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2	ENSG00000145934|ENST00000518659|TENM2	ENSG00000145934|ENST00000518659|TENM2	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2073242068291	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.253	1	84.514	84.014	85.014	0.26083								0	0	0	0.42693	1	35239	35239		0.96228	0.50394	1				15393	3130	7153	7187	18185	18185					0.08350039576816926
KNKQKELVIPD	11	Unmodified	_KNKQKELVIPD_					0	0	0		tr|A0A553SMS5|A0A553SMS5_NIACINADH-dependentflavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_23000PE=4SV=1	tr|A0A553SMS5|A0A553SMS5_NIACINADH-dependentflavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_23000PE=4SV=1	tr|A0A553SMS5|A0A553SMS5_NIACINADH-dependentflavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_23000PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.1997863650322	4	328.696227	1310.7558	0.67959	0.00022338	-3.6958	-0.0012148	-3.0162	-0.00099142	328.69524372611335	33.075	0.18453	33.369	33.305	33.489	0.29431					7	5	2	0	0	0	0.14606	1	13921	13921		2.4348	0.52841	1	403620			15394	16389	7154	7188	18186	18186					0.11285288694466544
KNKQLFLRLIF	11	Unmodified	_KNKQLFLRLIF_					0	0	0			REV__ERCC4|p.R153L|1|0.12|ENSG00000175595|chr16:13926630-13926630|G/T|missense_variant	REV__ERCC4|p.R153L|1|0.12|ENSG00000175595|chr16:13926630-13926630|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0700866580009	4	355.726324	1418.87619	2.2356	0.00079525	-3.7659	-0.0013396	-1.5303	-0.00054438	355.7247764341817	72.784	0.31705	74.594	74.48	74.797	1.8101					20	9	3	0	0	0	0.14606	1	30556	30556		0.08335	0.08335	1	311310	+		15395	14155	7155	7189	18187	18187					0.18350741478730015
KNKQLSLPPR	10	Unmodified	_KNKQLSLPPR_					0	0	0			REV__AluJb_dup56968|chr8:98045693-98046014:+|2.977947165322794|0.0002169198745066|13.74|429.0|6|2|sense	REV__AluJb_dup56968|chr8:98045693-98046014:+|2.977947165322794|0.0002169198745066|13.74|429.0|6|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2439147830009	3	394.24354	1179.70879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.494	1	79.494	78.994	79.994	0								0	0	0	0.66222	1	33099	33099		0.69767	0	1		+		15396	8104	7156	7190	18188	18188					0.12612473933995716
KNKRIFRIR	9	Unmodified	_KNKRIFRIR_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.2275268435478	4	308.4531	1229.78329	-1.8043	-0.00055655	3.0006	0.00092554	1.1963	0.00036899	308.7042516827586	61.714	0.31668	61.714	61.582	61.899	0					12	9	2	0	0	0	0.11955	1	25775	25775		0.23584	0.076522	1	502840	+		15397	10364	7157	7191	18189	18189					0.17759281536018534
KNKRIFRIR	9	Unmodified	_KNKRIFRIR_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.2276183962822	4	308.4531	1229.78329	-2.047	-0.0006314	3.9941	0.001232	1.9471	0.00060058	308.45423526334054	64.063	0.095367	64.063	63.983	64.079	0					4	2	2	0	0	0	0.11955	1	26687	26687		0.23584	0.095952	1	149770	+		15398	10364	7157	7191	18190	18190					0.17759281536018534
KNKRIFRIR	9	Unmodified	_KNKRIFRIR_					0	0	0			REV__ENSG00000149256|ENST00000278550|TENM4	REV__ENSG00000149256|ENST00000278550|TENM4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.2072631716728	4	308.4531	1229.78329	1.7393	0.00053651	-0.14914	-4.6002E-05	1.5902	0.0004905	308.4534091771604	75.515	0.15206	75.837	75.773	75.925	0.32163					6	4	2	0	0	0	0.11955	1	31593	31593		0.23584	0.095952	1	249340	+		15399	10364	7157	7191	18191	18191					0.17759281536018534
KNKRKRYRKK	10	Unmodified	_KNKRKRYRKK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	352.0601379275322	4	351.981019	1403.89497	0.43774	0.00015408	-2.0462	-0.00072022	-1.6085	-0.00056615	351.97940779630477	43.202	0.32732	44.555	44.408	44.735	1.3536					14	10	2	0	0	0	0.12561	1	18136	18136		0	0	1	615920	+		15400	8636	7158	7192	18192	18192					0.20917715893142486
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613098025322	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.18	1	105.23	104.73	105.73	0.056801								0	0	0	0.42693	1	44530	44530		0.23584	0	1		+		15401	15546	7159	7193	18193	18193					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2618591189384	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.3	1	105.36	104.86	105.86	0.056801								0	0	0	0.42693	1	44611	44611		0.23584	0	1		+		15402	15546	7159	7193	18194	18194					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613403201103	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.52	1	105.58	105.08	106.08	0.056801								0	0	0	0.42693	1	44755	44755		1.0715	0	1		+		15403	15546	7159	7193	18195	18195					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2618591189384	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.63	1	105.69	105.19	106.19	0.05455								0	0	0	0.42693	1	44832	44832		0.23584	0	1		+		15404	15546	7159	7193	18196	18196					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613098025322	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.94	1	106	105.5	106.5	0.05455								0	0	0	0.42693	1	45038	45038		0.23584	0	1		+		15405	15546	7159	7193	18197	18197					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2615234255791	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.21	1	106.27	105.77	106.77	0.05455								0	0	0	0.42693	1	45207	45207		0.23584	0	1		+		15406	15546	7159	7193	18198	18198					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2615539431572	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.42	1	106.47	105.97	106.97	0.05455								0	0	0	0.42693	1	45336	45336		0.23584	0	1		+		15407	15546	7159	7193	18199	18199					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614318728447	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.52	1	106.58	106.08	107.08	0.05455								0	0	0	0.42693	1	45402	45402		0.23584	0	1		+		15408	15546	7159	7193	18200	18200					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2619506716728	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.38	1	107.44	106.94	107.94	0.052452								0	0	0	0.42693	1	45921	45921		0.23584	0	1		+		15409	15546	7159	7193	18201	18201					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614318728447	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.48	1	107.54	107.04	108.04	0.052452								0	0	0	0.42693	1	45986	45986		0.23584	0	1		+		15410	15546	7159	7193	18202	18202					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613403201103	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.59	1	107.64	107.14	108.14	0.052452								0	0	0	0.42693	1	46057	46057		0.23584	0	1		+		15411	15546	7159	7193	18203	18203					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613708376884	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.81	1	107.86	107.36	108.36	0.052452								0	0	0	0.42693	1	46212	46212		0.23584	0	1		+		15412	15546	7159	7193	18204	18204					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2617370486259	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.18	1	109.23	108.73	109.73	0.048843								0	0	0	0.42693	1	47057	47057		0.23584	0	1		+		15413	15546	7159	7193	18205	18205					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2610961794853	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.19	103.69	104.69	0.16055								0	0	0	0.42693	1	43999	43999		0.23584	0	1		+		15414	15546	7159	7193	18206	18206					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2614623904228	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.37	1	104.54	104.04	105.04	0.1731								0	0	0	0.42693	1	44139	44139		1.0715	0	1		+		15415	15546	7159	7193	18207	18207					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2621032595634	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.7	1	104.87	104.37	105.37	0.1731								0	0	0	0.42693	1	44362	44362		1.0715	0	1		+		15416	15546	7159	7193	18208	18208					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2616760134697	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.8	1	104.97	104.47	105.47	0.16679								0	0	0	0.42693	1	44436	44436		0.23584	0	1		+		15417	15546	7159	7193	18209	18209					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2605773806572	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.11	1	105.28	104.78	105.78	0.16679								0	0	0	0.42693	1	44634	44634		0.23584	0	1		+		15418	15546	7159	7193	18210	18210					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2616454958916	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.25	1	105.42	104.92	105.92	0.16679								0	0	0	0.42693	1	44722	44722		0.23584	0	1		+		15419	15546	7159	7193	18211	18211					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2620422244072	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.52	105.02	106.02	0.16679								0	0	0	0.42693	1	44787	44787		0.23584	0	1		+		15420	15546	7159	7193	18212	18212					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2618591189384	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.47	1	105.63	105.13	106.13	0.16679								0	0	0	0.42693	1	44866	44866		0.23584	0	1		+		15421	15546	7159	7193	18213	18213					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2615539431572	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.56	1	105.73	105.23	106.23	0.16679								0	0	0	0.42693	1	44929	44929		0.23584	0	1		+		15422	15546	7159	7193	18214	18214					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2614929080009	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.66	1	105.83	105.33	106.33	0.16679								0	0	0	0.42693	1	44995	44995		0.23584	0	1		+		15423	15546	7159	7193	18215	18215					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2610961794853	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.77	1	105.94	105.44	106.44	0.16679								0	0	0	0.42693	1	45076	45076		0.23584	0	1		+		15424	15546	7159	7193	18216	18216					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2608520388603	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.88	1	106.04	105.54	106.54	0.16679								0	0	0	0.42693	1	45145	45145		0.23584	0	1		+		15425	15546	7159	7193	18217	18217					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2607604861259	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.99	1	106.15	105.65	106.65	0.16174								0	0	0	0.42693	1	45217	45217		0.23584	0	1		+		15426	15546	7159	7193	18218	18218					0.20914842698675784
KNKRLIKLV	9	Unmodified	_KNKRLIKLV_					0	0	0			REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	REV__tr|A0A7D6VWY9|A0A7D6VWY9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05970PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2611877322197	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.42	1	106.59	106.09	107.09	0.16174								0	0	0	0.42693	1	45517	45517		0.23584	0	1		+		15427	15546	7159	7193	18219	18219					0.20914842698675784
KNKRNPRL	8	Unmodified	_KNKRNPRL_					0	0	0		RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant;nc|ENSG00000198838|Q15413-3|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;ENSG00000198838|ENST00000634891|RYR3	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.0406371951103	3	342.549075	1024.6254	-1.754	-0.00060083	-2.2769	-0.00077996	-4.0309	-0.0013808	342.5477642369516	33.731	0.74103	33.731	33.39	34.131	0					62	23	3	0	0	0	2.3239	1	14295	14295		1.4819	0.15237	1	2168300			15428	5091	7160	7194	18220	18220					0.11406782276776539
KNKTLNLIHL	10	Unmodified	_KNKTLNLIHL_					0	0	0			REV__nc|ENSG00000164342|O15455-2|TLR3	REV__nc|ENSG00000164342|O15455-2|TLR3	MSMS	GG20161007_CRH_Patient100_W632_01	3	398.5852233767509	3	398.583674	1192.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.197	1	34.475	33.975	34.975	1.2782								0	0	0	0.66096	1	13919	13919		2.8433	1.101	1		+		15429	10734	7161	7195	18221	18221					0.14053644593786885
KNKTLNQQRS	10	Unmodified	_KNKTLNQQRS_					0	0	0		L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|8|2|sense	L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|8|2|sense	L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|8|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.8648559451103	4	304.924372	1215.66838	-3.0417	-0.00092749	-1.2796	-0.00039019	-4.3213	-0.0013177	304.9234035246869	23.181	0.33453	23.181	22.986	23.321	0					17	10	3	0	0	0	0.12557	1	9629	9629		1.5923	1.184	1	454130			15430	7725	7162	7196	18222	18222					0.06917507543562351
KNKTSAAT	8	Unmodified	_KNKTSAAT_					0	0	0			REV__ENST00000467586.5_1_17:74084367-74085867:-|nuORF	REV__ENST00000467586.5_1_17:74084367-74085867:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.7295715212822	2	410.729792	819.445031	1.7271	0.00070937	-0.62671	-0.00025741	1.1004	0.00045196	410.72900376975093	68.568	0.34113	68.891	68.657	68.998	0.32224					18	10	2	0	0	0	0.89178	1	28725	28725		0.69038	0	1	802490	+		15431	13248	7163	7197	18223	18223					0.028086388292649644
KNKVANLMKL	10	Unmodified	_KNKVANLMKL_					0	0	0			REV__nc|ENSG00000254685|O14772-2|FPGT	REV__nc|ENSG00000254685|O14772-2|FPGT	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	387.1514160037041	3	386.905759	1157.69545	-0.055934	-2.1641E-05	3.8993	0.0015087	3.8434	0.001487	386.9074537340082	44.402	0.12305	44.402	44.349	44.472	0					6	3	2	0	0	0	0.1256	1	18605	18605		0.13989	0.017027	1	319620	+		15432	11966	7164	7198	18224	18224					0.12290899830395574
KNKVANLMKL	10	Unmodified	_KNKVANLMKL_					0	0	0			REV__nc|ENSG00000254685|O14772-2|FPGT	REV__nc|ENSG00000254685|O14772-2|FPGT	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	386.905759	1157.69545	1.7495	0.00067688	-0.67097	-0.0002596	1.0785	0.00041728	386.9054233188812	43.75	0.19099	44.074	43.96	44.151	0.32389	-0.16434	-0.0015387	NaN	0.13989	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302020	+		15433	11966	7164	7198							0.12290899830395574
KNKVPIIKLV	10	Unmodified	_KNKVPIIKLV_					0	0	0		ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-3|PREX2;ENST00000529398.5_1_8:68864629-69017594:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2;ENSG00000046889|ENST00000288368|PREX2	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3961059451103	2	576.397359	1150.78016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.624	1	79.624	79.124	80.124	0								0	0	0	0.6624	1	33153	33153		0.40072	0.050084	1				15434	674	7165	7199	18225	18225					0.21080593638635037
KNKVRRVKTI	10	Unmodified	_KNKVRRVKTI_					0	0	0		ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000153317|Q9ULH1-2|ASAP1	ENSG00000153317|ENST00000518721|ASAP1	ENSG00000153317|ENST00000518721|ASAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1335021853447	4	311.20957	1240.80917	0.60767	0.00018911	0.017503	5.447E-06	0.62517	0.00019456	311.2094897048155	38.847	0.60814	40.684	40.272	40.88	1.8366					22	18	2	0	0	0	0.12561	1	16145	16145		0.13989	0	1	571810			15435	3354	7166	7200	18226	18226					0.1984013098763171
KNKVYLYVF	9	Unmodified	_KNKVYLYVF_					0	0	0		tr|A0A7D6VTH9|A0A7D6VTH9_9CLOTGlutamineamidotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08065PE=4SV=1	tr|A0A7D6VTH9|A0A7D6VTH9_9CLOTGlutamineamidotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08065PE=4SV=1	tr|A0A7D6VTH9|A0A7D6VTH9_9CLOTGlutamineamidotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08065PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843810915947	3	391.893737	1172.65938	1.8834	0.00073808	-1.75	-0.00068581	0.1334	5.228E-05	391.89300914857444	48.366	1.1696	50.343	49.929	51.099	1.9772					47	37	2	0	0	0	0.11901	1	20136	20136		1.0715	0.91214	1	3371600			15436	16920	7167	7201	18227	18227					0.07995765925170417
KNKWQKRRR	9	Unmodified	_KNKWQKRRR_					0	0	0			REV__nc|ENSG00000030304|O15146-3|MUSK	REV__nc|ENSG00000030304|O15146-3|MUSK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.9339172244072	3	433.933811	1298.7796	1.4947	0.00064859	0.71575	0.00031059	2.2104	0.00095918	433.933345013513	81.738	0.48328	81.738	81.643	82.127	0					24	15	2	0	0	0	0.83753	1	34114	34114		2.4985	1.9353	1	1105600	+		15437	8576	7168	7202	18228	18228					0.1421661176214002
KNKWQKRRR	9	Unmodified	_KNKWQKRRR_					0	0	0			REV__nc|ENSG00000030304|O15146-3|MUSK	REV__nc|ENSG00000030304|O15146-3|MUSK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	433.933811	1298.7796	1.4947	0.00064859	0.71575	0.00031059	2.2104	0.00095918	433.933345013513	81.738	0.48328	81.738	81.643	82.127	0	0	0	NaN	2.4985	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1105600	+		15438	8576	7168	7202							0.1421661176214002
KNKYIFLLLL	10	Unmodified	_KNKYIFLLLL_					0	0	0		tr|A0A7D6VV66|A0A7D6VV66_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23125PE=4SV=1	tr|A0A7D6VV66|A0A7D6VV66_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23125PE=4SV=1	tr|A0A7D6VV66|A0A7D6VV66_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2737609744072	3	422.272437	1263.79548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.988	1	77.305	76.805	77.805	0.31653								0	0	0	0.66222	1	32197	32197		0.69767	0.19171	1				15439	16962	7169	7203	18229	18229					0.17413460435841444
KNLEVIVT	8	Unmodified	_KNLEVIVT_					0	0	0		nc|ENSG00000107897|Q5T8D3-4|ACBD5;nc|ENSG00000107897|Q5T8D3-2|ACBD5;ENSG00000107897|ENST00000396271|ACBD5;nc|ENSG00000107897|Q5T8D3|ACBD5	nc|ENSG00000107897|Q5T8D3-4|ACBD5	nc|ENSG00000107897|Q5T8D3-4|ACBD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	915.5528442263603	1	915.550959	914.543683	2.1056	0.0019278	-0.38116	-0.00034897	1.7244	0.0015788	915.550695230856	61.389	0.30953	61.719	61.548	61.857	0.32974					18	9	2	0	0	0	0.15741	1	25726	25726		85.357	0	1	2575600			15440	1612	7170	7204	18230	18230					0.08299242074338053
KNLHIGLVT	9	Unmodified	_KNLHIGLVT_					0	0	0			REV__ENST00000526482.1_1_14:92920194-92959969:+|nuORF	REV__ENST00000526482.1_1_14:92920194-92959969:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2065612673759	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.197	1	86.197	85.697	86.697	0								0	0	0	0.42693	1	35916	35916		1.0715	0	1		+		15441	10116	7171	7205	18231	18231					0.10006039576853709
KNLHIGLVT	9	Unmodified	_KNLHIGLVT_					0	0	0			REV__ENST00000526482.1_1_14:92920194-92959969:+|nuORF	REV__ENST00000526482.1_1_14:92920194-92959969:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2065307497978	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.058	1	86.31	85.81	86.81	0.25227								0	0	0	0.42693	1	35986	35986		1.0715	0	1		+		15442	10116	7171	7205	18232	18232					0.10006039576853709
KNLKFRRN	8	Unmodified	_KNLKFRRN_					0	0	0			REV__ARGFX|p.K134N|1|0.38|ENSG00000186103|chr3:121586054-121586054|G/T|missense_variant	REV__ARGFX|p.K134N|1|0.38|ENSG00000186103|chr3:121586054-121586054|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.2210571169853	3	359.220958	1074.64105	1.2994	0.00046678	-0.92944	-0.00033388	0.36998	0.00013291	359.2207844103514	85.331	0.31773	86.49	86.271	86.589	1.159					27	11	3	0	0	0	0.89156	1	35851	35851		1.4819	0.41044	1	4599800	+		15443	8135	7172	7206	18233	18233					0.10671068793840277
KNLKKFRYV	9	Unmodified	_KNLKKFRYV_					0	0	0		ENST00000496441.5_1_2:174219691-174228743:+|nuORF;nc|ENSG00000144354|Q9BWT1-4|CDCA7;nc|ENSG00000144354|Q9BWT1-3|CDCA7;nc|ENSG00000144354|Q9BWT1|CDCA7;nc|ENSG00000144354|Q9BWT1-6|CDCA7;ENSG00000144354|ENST00000306721|CDCA7	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	ENST00000496441.5_1_2:174219691-174228743:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2510253787041	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.106	1	68.495	67.995	68.995	1.3888								0	0	0	0.42693	1	28150	28150		1.0715	0	1				15444	3070	7173	7207	18234	18234					0.13413965801987615
KNLKLTIII	9	Unmodified	_KNLKLTIII_					0	0	0		nc|ENSG00000292366|P51809-3|VAMP7;ENSG00000124333|ENST00000286448|VAMP7	nc|ENSG00000292366|P51809-3|VAMP7	nc|ENSG00000292366|P51809-3|VAMP7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3650390505791	2	528.362985	1054.71142	1.9308	0.0010201	1.4493	0.00076578	3.3801	0.0017859	528.3637732081063	94.098	0.46671	94.098	93.9	94.367	0					34	14	3	0	0	0	0.35391	1	39273	39273		22.736	2.3217	1	1493200			15445	2225	7174	7208	18235	18235					0.1862492933894373
KNLKLTIII	9	Unmodified	_KNLKLTIII_					0	0	0		nc|ENSG00000292366|P51809-3|VAMP7;ENSG00000124333|ENST00000286448|VAMP7	nc|ENSG00000292366|P51809-3|VAMP7	nc|ENSG00000292366|P51809-3|VAMP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3663818240166	2	528.362985	1054.71142	3.402	0.0017975	0.40554	0.00021427	3.8076	0.0020118	528.3632069648436	91.934	0.64505	93.261	93.021	93.666	1.3269					51	19	4	0	0	0	0.35391	1	38824	38824		22.736	1.1993	1	5541100			15446	2225	7174	7208	18236	18236					0.1862492933894373
KNLKSIELAFF	11	Unmodified	_KNLKSIELAFF_					0	0	0		ENSG00000169989|ENST00000304337|TIGD4	ENSG00000169989|ENST00000304337|TIGD4	ENSG00000169989|ENST00000304337|TIGD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1968261599541	4	328.19332	1308.74417	-0.6977	-0.00022898	3.9678	0.0013022	3.2701	0.0010732	328.195861980304	32.81	0.40729	34.088	33.887	34.295	1.2782					30	14	3	0	0	0	1.039	1	13795	13795		0.45452	0.046251	1	2180300			15447	4123	7175	7209	18237	18237					0.10215091671102527
KNLKSIELAFF	11	Unmodified	_KNLKSIELAFF_					0	0	0		ENSG00000169989|ENST00000304337|TIGD4	ENSG00000169989|ENST00000304337|TIGD4	ENSG00000169989|ENST00000304337|TIGD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	328.19332	1308.74417	0.2622	8.6051E-05	2.0921	0.00068661	2.3543	0.00077266	328.194575188197	32.183	0.30838	34.007	33.878	34.187	1.8246	-0.040397	-0.00096422	NaN	0.45452	24	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3064300			15448	4123	7175	7209							0.10215091671102527
KNLKVKRPVQ	10	Unmodified	_KNLKVKRPVQ_					0	0	0		ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1990539431572	4	303.200208	1208.77173	-2.5807	-0.00078246	-1.4565	-0.0004416	-4.0371	-0.0012241	303.1997851907609	33.758	1.2591	33.758	33.233	34.492	0					121	40	4	0	0	0	0.8974	1	14209	14209		1.7423	1.0446	1	7420400			15449	6648	7176	7210	18238	18238					0.17569039722025082
KNLKVKRPVQ	10	Unmodified	_KNLKVKRPVQ_					0	0	0		ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1991760134697	4	303.200208	1208.77173	-2.5534	-0.00077418	-1.6293	-0.00049399	-4.1826	-0.0012682	303.1997345928274	34.272	0.95454	34.272	34.1	35.055	0					65	31	3	0	0	0	0.8974	2	14429	14429;14511		1.7423	1.0446	1	6239600			15450	6648	7176	7210	18239;18240	18239					0.17569039722025082
KNLLGLTT	8	Unmodified	_KNLLGLTT_					0	0	0			REV__nc|ENSG00000119950|P50539-4|MXI1	REV__nc|ENSG00000119950|P50539-4|MXI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2661620974541	2	430.26601	858.517468	1.7812	0.00076641	-1.9264	-0.00082887	-0.14517	-6.2464E-05	430.2650640719285	70.851	0.62652	71.174	70.71	71.336	0.32359					42	19	3	0	0	0	0.89051	1	29604	29604		2.3027	0	1	4266300	+		15451	9562	7177	7211	18241	18241					0.08254972902830104
KNLLLAEVIN	10	Unmodified	_KNLLLAEVIN_					0	0	0		ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant;ENSG00000183044|ENST00000268251|ABAT;ENST00000566590.5_1_16:8807641-8875284:+|nuORF	ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant	ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2327453494072	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.503	1	61.472	60.972	61.972	1.969								0	0	0	0.66222	1	24966	24966		0.69767	0.07084	1				15452	3	7178	7212	18242	18242					0.11794847091277916
KNLLLAEVIN	10	Unmodified	_KNLLLAEVIN_					0	0	0		ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant;ENSG00000183044|ENST00000268251|ABAT;ENST00000566590.5_1_16:8807641-8875284:+|nuORF	ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant	ABAT|p.N406Ifs*28|1|0.07|ENSG00000183044|chr16:8776436-8776436|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2345458865166	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.769	1	82.465	81.965	82.965	1.6959								0	0	0	0.66222	1	33885	33885		0.69767	0.42865	1				15453	3	7178	7212	18243	18243					0.11794847091277916
KNLLQLTLLLF	11	Unmodified	_KNLLQLTLLLF_					0	0	0			REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	439.2851745486259	3	439.283113	1314.82751	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.993	1	63.993	63.493	64.493	0								0	0	0	0.63775	1	26682	26682		1.1098	0.33322	1		+		15454	15214	7179	7213	18244	18244					0.18268828118993952
KNLLQLTLLLF	11	Unmodified	_KNLLQLTLLLF_					0	0	0			REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	REV__tr|A0A553SSU3|A0A553SSU3_NIACIGHKLdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03710PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	439.3618957400322	3	439.283113	1314.82751	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.2	1	57.61	57.11	58.11	1.4099								0	0	0	0.63775	1	23552	23552		2.4348	0.52841	1		+		15455	15214	7179	7213	18245	18245					0.18268828118993952
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1005737185478	4	374.747856	1494.96232	1.6432	0.00061579	2.2071	0.0008271	3.8503	0.0014429	374.74856522942565	43.614	0.56821	43.938	43.675	44.244	0.32388					27	17	3	0	0	0	0.14606	1	18389	18389		0.08335	0.08335	1	1020200			15456	7288	7180	7214	18246	18246					0.23463746104107486
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1009399294853	4	374.747856	1494.96232	1.65	0.00061832	3.2602	0.0012218	4.9102	0.0018401	374.7491892155126	42.747	0.59446	43.067	42.818	43.412	0.32058					24	19	2	0	0	0	0.14606	1	17861	17861		0	0	1	2346600			15457	7288	7180	7214	18247	18247					0.23463746104107486
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	374.747856	1494.96232	0.79402	0.00029756	4.4018	0.0016496	5.1958	0.0019471	375.0001846503207	42.722	0.4705	44.062	43.827	44.298	1.3399	0.058125	0.0018214	NaN	0.08335	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2279400			15458	7288	7180	7214							0.23463746104107486
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	374.747856	1494.96232	1.3565	0.00050833	3.2891	0.0012326	4.6456	0.0017409	374.7491883227755	41.424	0.85592	42.749	42.21	43.066	1.3254	-0.16038	9.6578E-05	NaN	0	38	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1343600			15459	7288	7180	7214							0.23463746104107486
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	374.747856	1494.96232	1.4002	0.00052473	2.8733	0.0010768	4.2735	0.0016015	374.99950055390036	42.09	0.37222	44.011	43.731	44.103	1.9211	0.0076788	-0.00046981	NaN	0.08335	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2178600			15460	7288	7180	7214							0.23463746104107486
KNLLRRKLLRW	11	Unmodified	_KNLLRRKLLRW_					0	0	0		ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	ENST00000554413.1_1_12:97295953-97296385:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	374.747856	1494.96232	1.7249	0.00064639	3.1268	0.0011718	4.8517	0.0018182	374.7490067931942	41.019	0.81695	42.912	42.452	43.269	1.8927	0.0025061	-0.00014677	NaN	0	37	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2121500			15461	7288	7180	7214							0.23463746104107486
KNLLWQIPWL	10	Unmodified	_KNLLWQIPWL_					0	0	0			REV__tr|A0A7D7A3P8|A0A7D7A3P8_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00650PE=4SV=1	REV__tr|A0A7D7A3P8|A0A7D7A3P8_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00650PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2566711306572	3	437.592169	1309.75468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.742	1	81.742	81.242	82.242	0								0	0	0	0.66222	1	34048	34048		0.69767	0.07084	1		+		15462	15865	7181	7215	18248	18248					0.11219119116231013
KNLLWRYKRLE	11	Unmodified	_KNLLWRYKRLE_					0	0	0			REV__tr|A0A553SJN9|A0A553SJN9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17085PE=4SV=1	REV__tr|A0A553SJN9|A0A553SJN9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17085PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2486755251884	5	304.58389	1517.88307	1.0566	0.00032182	4.0298	0.0012274	5.0864	0.0015492	304.7863829683055	47.252	0.15453	47.582	47.512	47.667	0.33034					5	4	2	0	0	0	0.14606	1	19852	19852		0.08335	0	1	186730	+		15463	14914	7182	7216	18249	18249					0.14484054359286347
KNLMPPLLV	9	Unmodified	_KNLMPPLLV_					0	0	0		VPS11|p.H291Tfs*36|1|0.04|ENSG00000160695|chr11:119081155-119081155|C/-|frameshift_variant;nc|ENSG00000160695|Q9H270|VPS11;ENSG00000160695|ENST00000621676|VPS11	VPS11|p.H291Tfs*36|1|0.04|ENSG00000160695|chr11:119081155-119081155|C/-|frameshift_variant	VPS11|p.H291Tfs*36|1|0.04|ENSG00000160695|chr11:119081155-119081155|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2124816775322	3	342.212301	1023.61507	0.59932	0.00020509	1.6157	0.00055292	2.215	0.00075802	342.2122666549247	28.808	0.64277	29.088	28.737	29.38	0.27929					62	20	4	0	0	0	0.85019	1	12037	12037		0.23584	0	1	2395100			15464	3568	7183	7217	18250	18250					0.10421038507331559
KNLNKVARK	9	Unmodified	_KNLNKVARK_					0	0	0		chr11:12997086-13001090|278|10.34|0.0|19.98|-|1|TE_info:L1PA13,L1PA13_dup6381,L1,LINE,acceptor,-,12995692,12997086|None,RASSF10-DT|6	chr11:12997086-13001090|278|10.34|0.0|19.98|-|1|TE_info:L1PA13,L1PA13_dup6381,L1,LINE,acceptor,-,12995692,12997086|None,RASSF10-DT|6	chr11:12997086-13001090|278|10.34|0.0|19.98|-|1|TE_info:L1PA13,L1PA13_dup6381,L1,LINE,acceptor,-,12995692,12997086|None,RASSF10-DT|6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.2323181033134	3	357.564614	1069.67201	-0.38359	-0.00013716	4.0316	0.0014415	3.648	0.0013044	357.89993056378387	29.841	0.36738	31.123	30.98	31.348	1.2825					28	11	3	0	0	0	0.11909	1	12528	12528		2.4985	1.427	1	1137200			15465	181	7184	7218	18251	18251					0.13996222108062284
KNLQRPLDPR	10	Unmodified	_KNLQRPLDPR_					0	0	0			REV__tr|A0A7D6VPV8|A0A7D6VPV8_9CLOTFlavocytochromecOS=ClostridiumintestinaleOX=36845GN=HZF06_00475PE=3SV=1	REV__tr|A0A7D6VPV8|A0A7D6VPV8_9CLOTFlavocytochromecOS=ClostridiumintestinaleOX=36845GN=HZF06_00475PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.9121581912041	3	412.910561	1235.70985	1.9523	0.00080614	0.19802	8.1763E-05	2.1504	0.00088791	412.91129089952375	80.554	0.87862	82.271	81.908	82.787	1.7167					45	28	2	0	0	0	0.8974	1	33822	33822		1.7423	0	1	760580	+		15466	15366	7185	7219	18252	18252					0.10142688302858005
KNLQRPLQAEL	11	Unmodified	_KNLQRPLQAEL_					0	0	0		nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0-4|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B	nc|ENSG00000155158|Q5VTQ0-7|TTC39B	nc|ENSG00000155158|Q5VTQ0-7|TTC39B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2572509646416	3	437.257738	1308.75138	1.8237	0.00079744	-1.3612	-0.00059521	0.46249	0.00020223	437.25680180361326	83.571	1.6615	83.571	82.8	84.461	0					112	53	3	0	0	0	1.0365	3	34734	34734;34793;35044		1.2148	0.51716	1	2658900			15467	3409	7186	7220	18253;18254;18255	18253					0.10935824271564343
KNLQRPLQAEL	11	Unmodified	_KNLQRPLQAEL_					0	0	0		nc|ENSG00000155158|Q5VTQ0-7|TTC39B;ENST00000380853.1_1_9:15172019-15185442:-|nuORF;nc|ENSG00000155158|Q5VTQ0-5|TTC39B;nc|ENSG00000155158|Q5VTQ0-2|TTC39B;nc|ENSG00000155158|Q5VTQ0-6|TTC39B;ENSG00000155158|ENST00000512701|TTC39B;nc|ENSG00000155158|Q5VTQ0-3|TTC39B;nc|ENSG00000155158|Q5VTQ0-4|TTC39B;nc|ENSG00000155158|Q5VTQ0|TTC39B	nc|ENSG00000155158|Q5VTQ0-7|TTC39B	nc|ENSG00000155158|Q5VTQ0-7|TTC39B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2572814822197	3	437.257738	1308.75138	2.7867	0.0012185	-1.8886	-0.00082579	0.89817	0.00039273	437.25661761529017	83.584	1.1665	83.855	83.091	84.257	0.27029					77	37	3	0	0	0	1.0365	2	34896	34896;34949		1.2148	0.51716	1	1929400			15468	3409	7186	7220	18256;18257	18256					0.10935824271564343
KNLRIITT	8	Unmodified	_KNLRIITT_					0	0	0			REV__ENSG00000218305|ENST00000650262|CDC14C	REV__ENSG00000218305|ENST00000650262|CDC14C	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2052490115166	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.597	1	85.234	84.734	85.734	1.6379								0	0	0	1.0178	1	35064	35064		0.40072	0	1		+		15469	8816	7187	7221	18258	18258					0.1166203957682228
KNLRQQRIF	9	Unmodified	_KNLRQQRIF_					0	0	0		tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1801635622978	3	401.575401	1201.70437	0.75876	0.0003047	-0.32698	-0.00013131	0.43178	0.00017339	401.57529084089356	90.454	0.33296	90.454	90.288	90.621	0					20	10	2	0	0	0	0.11941	1	37837	37837		0.23584	0	1	2648600			15470	16267	7188	7222	18259	18259					0.11159009511061413
KNLRQQRIF	9	Unmodified	_KNLRQQRIF_					0	0	0		tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	tr|A0A553SK05|A0A553SK05_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_17865PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1812621951103	3	401.575401	1201.70437	4.6676	0.0018744	-2.7488	-0.0011039	1.9188	0.00077054	401.57436646660904	89.672	0.33846	90.692	90.461	90.8	1.0199					19	10	2	0	0	0	0.11941	1	37715	37715		0.23584	0	1	1084300			15471	16267	7188	7222	18260	18260					0.11159009511061413
KNLRTRVLIP	10	Unmodified	_KNLRTRVLIP_					0	0	0		ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1992980837822	4	303.200208	1208.77173	-2.6672	-0.00080869	-0.37655	-0.00011417	-3.0437	-0.00092286	303.20008450280005	31.651	1.3899	31.651	30.928	32.318	0					148	44	4	0	0	0	0.89588	1	13315	13315		1.9064	0.1641	1	5737000			15472	6154	7189	7223	18261	18261					0.1756903972204782
KNLRTRVLIP	10	Unmodified	_KNLRTRVLIP_					0	0	0		ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	ENST00000373055.5_1_1:38175097-38175361:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1989623904228	4	303.200208	1208.77173	-2.5807	-0.00078246	-1.4565	-0.0004416	-4.0371	-0.0012241	303.1997851907609	33.758	1.2591	33.758	33.233	34.492	0					121	40	4	0	0	0	0.89588	1	14248	14248		1.9064	0.1641	1	7420400			15473	6154	7189	7223	18262	18262					0.1756903972204782
KNLTKYPT	8	Unmodified	_KNLTKYPT_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;ENSG00000149262|ENST00000534064|INTS4;INTS4-CYP2R1|1|fusion;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-3|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1863586306572	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.217	1	75.217	74.717	75.717	0								0	0	0	1.0178	1	31315	31315		1.4819	0	1				15474	7658	7190	7224	18263	18263					0.05570357931560466
KNLTKYPT	8	Unmodified	_KNLTKYPT_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;ENSG00000149262|ENST00000534064|INTS4;INTS4-CYP2R1|1|fusion;ENST00000587624.5_1_7:64601607-64646883:+|nuORF;nc|ENSG00000149262|Q96HW7-3|INTS4;ENST00000433818.6_1_11:77629258-77692594:-|nuORF;nc|ENSG00000149262|Q96HW7-2|INTS4	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1862670779228	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.724	1	75.724	75.224	76.224	0								0	0	0	1.0178	1	31523	31523		1.4819	0	1				15475	7658	7190	7224	18264	18264					0.05570357931560466
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1915771365166	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.968	1	90.178	89.678	90.678	0.20904								0	0	0	1.0178	1	37701	37701		1.4819	1.0236	1		+		15476	15221	7191	7225	18265	18265					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1909973025322	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.803	1	58.217	57.717	58.717	1.4145								0	0	0	1.0178	1	23807	23807		1.3295	0.13619	1		+		15477	15221	7191	7225	18266	18266					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1914245486259	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.997	1	80.264	79.764	80.764	1.2668								0	0	0	1.0178	1	33160	33160		1.4819	0.41044	1		+		15478	15221	7191	7225	18267	18267					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1917602419853	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.413	1	85.572	85.072	86.072	1.159								0	0	0	1.0178	1	35422	35422		1.4819	0.28856	1		+		15479	15221	7191	7225	18268	18268					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1906005740166	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.541	1	85.7	85.2	86.2	1.159								0	0	0	1.0178	1	35473	35473		1.4819	1.0236	1		+		15480	15221	7191	7225	18269	18269					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1912109255791	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.787	1	85.946	85.446	86.446	1.159								0	0	0	1.0178	1	35578	35578		1.4819	1.0236	1		+		15481	15221	7191	7225	18270	18270					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1918823122978	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.902	1	86.061	85.561	86.561	1.159								0	0	0	1.0178	1	35627	35627		1.4819	1.0236	1		+		15482	15221	7191	7225	18271	18271					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1912719607353	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.021	1	86.18	85.68	86.68	1.159								0	0	0	1.0178	1	35677	35677		1.4819	1.0236	1		+		15483	15221	7191	7225	18272	18272					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1917602419853	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.185	1	86.344	85.844	86.844	1.159								0	0	0	1.0178	1	35746	35746		1.4819	1.0236	1		+		15484	15221	7191	7225	18273	18273					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913940310478	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.472	1	65.417	64.917	65.917	1.9444								0	0	0	1.0178	1	26630	26630		1.4819	0.15237	1		+		15485	15221	7191	7225	18274	18274					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913329958916	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.82	1	66.748	66.248	67.248	1.928								0	0	0	1.0178	1	27190	27190		1.4819	0.28856	1		+		15486	15221	7191	7225	18275	18275					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1912109255791	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.942	1	66.85	66.35	67.35	1.9085								0	0	0	1.0178	1	27241	27241		1.4819	0.28856	1		+		15487	15221	7191	7225	18276	18276					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913329958916	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.069	1	66.978	66.478	67.478	1.9085								0	0	0	1.0178	1	27294	27294		1.4819	0.28856	1		+		15488	15221	7191	7225	18277	18277					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1916381716728	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.186	1	67.094	66.594	67.594	1.9085								0	0	0	1.0178	1	27342	27342		1.3295	0.13619	1		+		15489	15221	7191	7225	18278	18278					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1909362673759	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.612	1	67.521	67.021	68.021	1.9085								0	0	0	1.0178	1	27521	27521		1.4819	0.28856	1		+		15490	15221	7191	7225	18279	18279					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1915466189384	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.939	1	67.848	67.348	68.348	1.9085								0	0	0	1.0178	1	27663	27663		1.4819	0.28856	1		+		15491	15221	7191	7225	18280	18280					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1908752322197	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.608	1	68.497	67.997	68.997	1.8889								0	0	0	1.0178	1	27941	27941		1.3295	0.13619	1		+		15492	15221	7191	7225	18281	18281					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1912109255791	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.816	1	68.705	68.205	69.205	1.8889								0	0	0	1.0178	1	28032	28032		1.4819	1.0236	1		+		15493	15221	7191	7225	18282	18282					0.08901180025713984
KNLVRSVT	8	Unmodified	_KNLVRSVT_					0	0	0			REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	REV__tr|A0A553SSY4|A0A553SSY4_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03915PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1912719607353	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.138	1	69.027	68.527	69.527	1.8889								0	0	0	1.0178	1	28165	28165		1.4819	0.28856	1		+		15494	15221	7191	7225	18283	18283					0.08901180025713984
KNLWEQICKE	10	Unmodified	_KNLWEQICKE_					0	0	0		ENST00000566312.1_1_16:19729742-19745154:+|nuORF;nc|ENSG00000174628|Q8N0W5-2|IQCK;nc|ENSG00000174628|Q8N0W5-3|IQCK;ENST00000564515.5_1_16:19729628-19746934:+|nuORF;ENSG00000174628|ENST00000695302|IQCK	ENST00000566312.1_1_16:19729742-19745154:+|nuORF	ENST00000566312.1_1_16:19729742-19745154:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8894836306572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.863	1	93.19	92.69	93.69	1.3269								0	0	0	0.6623	1	38679	38679		0.56317	0	1				15495	4336	7192	7226	18284	18284					0.010571113457899628
KNMEEMFH	8	Unmodified	_KNMEEMFH_					0	0	0		CACNA2D3-TEX264|1|fusion;ENSG00000157445|ENST00000474759|CACNA2D3;CACNA2D3-DAP3|1|fusion	CACNA2D3-TEX264|1|fusion	CACNA2D3-TEX264|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0702087283134	3	355.821255	1064.44194	2.153	0.0007661	-3.1279	-0.001113	-0.9749	-0.00034689	355.8205398416469	81.439	0.1852	82.672	82.626	82.811	1.2332					6	5	2	0	0	0	2.3239	1	34201	34201		0.40072	0	1	164340			15496	112	7193	7227	18285	18285					-0.08770695611383417
KNMKYCFGC	9	Unmodified	_KNMKYCFGC_					0	0	0			REV__ENST00000465517.1_1_12:40223765-40265636:-|nuORF	REV__ENST00000465517.1_1_12:40223765-40265636:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	365.1912414431572	3	365.159102	1092.45548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.401	1	68.401	67.901	68.901	0								0	0	0	0.42693	1	28486	28486		0.23584	0	1		+		15497	10397	7194	7228	18286	18286					-0.08705161103807768
KNMPDEEE	8	Unmodified	_KNMPDEEE_					0	0	0			REV__ENST00000589009.5_1_19:10227257-10229639:-|nuORF	REV__ENST00000589009.5_1_19:10227257-10229639:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.1391784548759	3	331.139418	990.396426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.536	1	42.536	42.036	43.036	0								0	0	0	1.0178	1	17801	17801		0.40072	0	1		+		15498	14048	7195	7229	18287	18287					-0.0991564259278448
KNMSHRLF	8	Unmodified	_KNMSHRLF_					0	0	0		ENST00000480745.5_1_20:43601894-43602017:+|nuORF	ENST00000480745.5_1_20:43601894-43602017:+|nuORF	ENST00000480745.5_1_20:43601894-43602017:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1872741580009	3	344.851766	1031.53347	0.9703	0.00033461	4.3452	0.0014984	5.3155	0.001833	345.1871735144237	41.419	0.91546	42.745	42.241	43.157	1.3254					45	28	2	0	0	0	0.89008	1	17395	17395		1.6526	0	1	2442800			15499	6820	7196	7230	18288	18288					0.018963558680979986
KNMSIKMRA	9	Unmodified	_KNMSIKMRA_					0	0	0		ENST00000504771.2_1_5:118729947-118730076:+|nuORF	ENST00000504771.2_1_5:118729947-118730076:+|nuORF	ENST00000504771.2_1_5:118729947-118730076:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2021667361259	3	360.200178	1077.5787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.109	1	77.425	76.925	77.925	0.31653								0	0	0	0.42693	1	32247	32247		0.96228	0.50394	1				15500	6999	7197	7231	18289	18289					0.043018383389835435
KNNDDERF	8	Unmodified	_KNNDDERF_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	347.2916747927666	3	346.493072	1036.45739	3.1381	0.0010873	-0.96431	-0.00033413	2.1738	0.00075321	346.49296784469755	87.321	0.30776	88.413	88.304	88.612	1.0918					14	9	2	0	0	0	2.3239	1	36849	36849		0.40072	0	1	552590			15501	16516	7198	7232	18290	18290					-0.059383694983580426
KNNDDWEED	9	Unmodified	_KNNDDWEED_					0	0	0		tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1519653201103	3	388.819513	1163.43671	0.9844	0.00038275	3.6959	0.001437	4.6803	0.0018198	389.1542710228223	71.081	0.43082	72.905	72.667	73.098	1.824					17	13	2	0	0	0	0.11948	1	29804	29804		0	0	1	423540			15502	16883	7199	7233	18291	18291					-0.13847004668673435
KNNDDWEED	9	Unmodified	_KNNDDWEED_					0	0	0		tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	tr|A0A7D6VST0|A0A7D6VST0_9CLOTStk1familyPASTAdomain-containingSer/ThrkinaseOS=ClostridiumintestinaleOX=36845GN=pknBPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	388.819513	1163.43671	1.2708	0.00049413	8.3575	0.0032496	9.6284	0.0037437	388.8234009859879	71.452	0.27779	72.793	72.689	72.967	1.3415	-0.05571	0.0019609	NaN	0	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	502740			15503	16883	7199	7233							-0.13847004668673435
KNNKDKKK	8	Unmodified	_KNNKDKKK_					0	0	0			REV__ENST00000536936.1_1_20:6088276-6096632:-|nuORF	REV__ENST00000536936.1_1_20:6088276-6096632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.8072387576103	2	501.806365	1001.59818	1.8725	0.00093966	-1.1983	-0.00060129	0.67429	0.00033836	501.80639570579507	93.38	0.35054	93.38	93.169	93.52	0					17	10	2	0	0	0	0.89178	1	39034	39034		0.69038	0	1	614710	+		15504	9030	7200	7234	18292	18292					0.09744253945746095
KNNKDKKK	8	Unmodified	_KNNKDKKK_					0	0	0			REV__ENST00000536936.1_1_20:6088276-6096632:-|nuORF	REV__ENST00000536936.1_1_20:6088276-6096632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8073913455009	2	501.806365	1001.59818	3.2064	0.001609	-2.1764	-0.0010921	1.03	0.00051685	501.80634667286677	93.223	0.35696	93.391	93.19	93.547	0.16835					18	10	2	0	0	0	0.89178	1	39018	39018		0.69038	0	1	381970	+		15505	9030	7200	7234	18293	18293					0.09744253945746095
KNNKGKNK	8	Unmodified	_KNNKGKNK_					0	0	0		tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7789184451103	2	465.777608	929.540663	2.8457	0.0013255	0.4786	0.00022292	3.3243	0.0015484	465.77745955815874	76.737	0.75319	77.053	76.506	77.259	0.31653					50	23	3	0	0	0	0.89051	1	32035	32035		2.3027	0	1	4202500			15506	16996	7201	7235	18294	18294					0.07307411740180214
KNNKGKNK	8	Unmodified	_KNNKGKNK_					0	0	0		tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7799255251884	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.438	1	61.768	61.268	62.268	0.32974								0	0	0	1.0178	1	25740	25740		2.3027	0	1				15507	16996	7201	7235	18295	18295					0.07307411740180214
KNNKGKNK	8	Unmodified	_KNNKGKNK_					0	0	0		tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	tr|A0A7D6VY33|A0A7D6VY33_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19755PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7786437869072	2	465.777608	929.540663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.464	1	62.794	62.294	63.294	0.32974								0	0	0	1.0178	1	26171	26171		2.3027	0	1				15508	16996	7201	7235	18296	18296					0.07307411740180214
KNNKQYEFL	9	Unmodified	_KNNKQYEFL_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.2079650759697	3	395.208384	1182.60332	1.0875	0.0004298	-2.4657	-0.00097445	-1.3781	-0.00054465	395.20738111745595	46.008	0.39801	47.978	47.758	48.156	1.9703					23	12	2	0	0	0	0.70108	1	19277	19277		4.5289	2.0304	1	1149700	+		15509	11034	7202	7236	18297	18297					0.019325130177094252
KNNKQYEFL	9	Unmodified	_KNNKQYEFL_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	395.208384	1182.60332	1.2019	0.00047499	-2.126	-0.00084023	-0.92416	-0.00036524	395.2073288074682	46.402	0.33801	47.777	47.681	48.019	1.3751	-0.10077	0.00024444	NaN	4.5289	22	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	906570	+		15510	11034	7202	7236							0.019325130177094252
KNNKQYEFL	9	Unmodified	_KNNKQYEFL_					0	0	0			REV__ENSG00000171560|ENST00000403106|FGA	REV__ENSG00000171560|ENST00000403106|FGA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	395.208384	1182.60332	1.0875	0.0004298	-2.4657	-0.00097445	-1.3781	-0.00054465	395.20738111745595	46.008	0.39801	47.978	47.758	48.156	1.9703	0.10077	-0.00015823	NaN	4.5289	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1149700	+		15511	11034	7202	7236							0.019325130177094252
KNNKSSKIL	9	Unmodified	_KNNKSSKIL_					0	0	0			REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	344.5452453494072	3	344.545108	1030.61349	1.4976	0.000516	0.11117	3.8303E-05	1.6088	0.0005543	344.54500070972784	82.95	0.36597	84.162	84.015	84.381	1.2125					14	11	2	0	0	0	0.83753	1	34838	34838		0.96228	0.0979	1	781580	+		15512	15437	7203	7237	18298	18298					0.0994112074295117
KNNKSSKIL	9	Unmodified	_KNNKSSKIL_					0	0	0			REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	344.545108	1030.61349	1.971	0.00067911	-1.8552	-0.00063921	0.1158	3.99E-05	344.54469779701674	83.789	0.36388	84.059	83.832	84.196	0.27029	-0.12832	-0.00077752	NaN	0.96228	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1505300	+		15513	15437	7203	7237							0.0994112074295117
KNNKSSKIL	9	Unmodified	_KNNKSSKIL_					0	0	0			REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	344.545108	1030.61349	1.4976	0.000516	0.11117	3.8303E-05	1.6088	0.0005543	344.54500070972784	82.95	0.36597	84.162	84.015	84.381	1.2125	-0.025529	0.001255	NaN	0.96228	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781580	+		15514	15437	7203	7237							0.0994112074295117
KNNKSSKIL	9	Unmodified	_KNNKSSKIL_					0	0	0			REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	REV__tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	344.545108	1030.61349	2.2593	0.00077844	-1.647	-0.00056746	0.61233	0.00021098	344.5446631335588	82.672	0.24252	84.342	84.205	84.447	1.67	0.15384	-0.00056225	NaN	0.96228	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907210	+		15515	15437	7203	7237							0.0994112074295117
KNNKTARI	8	Unmodified	_KNNKTARI_					0	0	0		tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	472.2841369509697	2	472.785433	943.556313	3.0198	0.0014277	0.57428	0.00027151	3.5941	0.0016992	472.785575535123	88.363	0.52137	88.363	88.211	88.732	0					21	16	2	0	0	0	2.3239	1	36876	36876		2.3027	0	1	493630			15516	16408	7204	7238	18299	18299					0.08227698257235261
KNNKWSNHV	9	Unmodified	_KNNKWSNHV_					0	0	0			REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.1974059939384	3	376.19659	1125.56794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.11	1	48.441	47.941	48.941	0.33034								0	0	0	0.42693	1	20175	20175		1.0715	0.3738	1		+		15517	8443	7205	7239	18300	18300					0.010178952805517838
KNNKWSNHV	9	Unmodified	_KNNKWSNHV_					0	0	0			REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.1971923708916	3	376.19659	1125.56794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.674	1	49.056	48.556	49.556	1.3825								0	0	0	0.42693	1	19957	19957		1.0715	0.10919	1		+		15518	8443	7205	7239	18301	18301					0.010178952805517838
KNNKWSNHV	9	Unmodified	_KNNKWSNHV_					0	0	0			REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.1973754763603	3	376.19659	1125.56794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.277	1	49.253	48.753	49.753	1.976								0	0	0	0.42693	1	19799	19799		1.0715	0.3738	1		+		15519	8443	7205	7239	18302	18302					0.010178952805517838
KNNKWSNHV	9	Unmodified	_KNNKWSNHV_					0	0	0			REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	REV__DHX8|p.Y1049H|1|0.26|ENSG00000067596|chr17:43521447-43521447|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.1974975466728	3	376.19659	1125.56794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.394	1	49.37	48.87	49.87	1.976								0	0	0	0.42693	1	19849	19849		1.0715	0.3738	1		+		15520	8443	7205	7239	18303	18303					0.010178952805517838
KNNQLILV	8	Unmodified	_KNNQLILV_					0	0	0			REV__tr|A0A7D6ZYK1|A0A7D6ZYK1_9CLOTDUF4003familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16625PE=4SV=1	REV__tr|A0A7D6ZYK1|A0A7D6ZYK1_9CLOTDUF4003familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16625PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.7121459841728	3	314.530798	940.570566	-0.098144	-3.0869E-05	-0.38947	-0.0001225	-0.48761	-0.00015337	314.5306261037603	24.114	0.21506	25.799	25.722	25.937	1.6845					11	6	2	0	0	0	2.3239	1	10089	10089		3.9444	0	1	426770	+		15521	15780	7206	7240	18304	18304					0.09790350685534577
KNNSRINI	8	Unmodified	_KNNSRINI_					0	0	0		tr|A0A7D6ZJZ7|A0A7D6ZJZ7_9CLOTUPF0122proteinHZF06_10545OS=ClostridiumintestinaleOX=36845GN=HZF06_10545PE=3SV=1	tr|A0A7D6ZJZ7|A0A7D6ZJZ7_9CLOTUPF0122proteinHZF06_10545OS=ClostridiumintestinaleOX=36845GN=HZF06_10545PE=3SV=1	tr|A0A7D6ZJZ7|A0A7D6ZJZ7_9CLOTUPF0122proteinHZF06_10545OS=ClostridiumintestinaleOX=36845GN=HZF06_10545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7758056521416	2	479.775065	957.535577	2.7945	0.0013407	-3.0177	-0.0014478	-0.2232	-0.00010709	479.77432031389174	78.565	0.4598	79.832	79.543	80.003	1.2668					24	14	3	0	0	0	0.87276	1	33002	33002		13.508	0	1	1793800			15522	17112	7207	7241	18305	18305					0.055111078775553324
KNPCHNGGLC	10	Unmodified	_KNPCHNGGLC_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;MFGE8-CRTC1|1|fusion	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	348.2021667361259	3	348.156749	1041.44842	0.59947	0.00020871	0.69566	0.0002422	1.2951	0.00045091	348.15695181611716	67.475	0.40005	68.853	68.665	69.065	1.3778					19	12	2	0	0	0	0.12555	1	28270	28270		0.69767	0.23933	1	901750			15523	2924	7208	7242	18306	18306					-0.07064757660009491
KNPCHNGGLC	10	Unmodified	_KNPCHNGGLC_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;MFGE8-CRTC1|1|fusion	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	348.156749	1041.44842	0.82933	0.00028874	0.93359	0.00032503	1.7629	0.00061377	348.15696397317106	67.019	0.28463	68.908	68.733	69.018	1.8889	0.027343	0.00016367	NaN	0.69767	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1079400			15524	2924	7208	7242							-0.07064757660009491
KNPHGGGA	8	Unmodified	_KNPHGGGA_					0	0	0			REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	REV__ENST00000490362.1_1_2:217498183-217525611:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	369.1228210330009	2	369.188094	736.361636	1.557	0.00057481	3.393	0.0012527	4.95	0.0018275	369.18962196153115	48.742	0.3717	49.073	48.853	49.224	0.33034					15	11	2	0	0	0	2.3239	1	20495	20495		0.69038	0.69038	1	350440	+		15525	13422	7209	7243	18307	18307					-0.01709052827902724
KNPKIAMV	8	Unmodified	_KNPKIAMV_					0	0	0		tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	tr|A0A7D6VQC7|A0A7D6VQC7_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	300.8501159548759	3	300.849363	899.526258	0.52068	0.00015665	-0.20652	-6.2133E-05	0.31416	9.4514E-05	300.84998155927497	38.645	0.44492	40.481	40.209	40.654	1.8366					37	13	4	0	0	0	0.89152	1	16237	16237		1.6526	0	1	2753300			15526	16789	7210	7244	18308	18308					0.07247623267687686
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2230407595634	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.165	1	61.495	60.995	61.995	0.32974								0	0	0	0.66222	1	25627	25627		0.69767	0.42865	1				15527	678	7211	7245	18309	18309					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2230102419853	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.611	1	65.938	65.438	66.438	0.32689								0	0	0	0.66222	1	27472	27472		0.69767	0.42865	1				15528	678	7211	7245	18310	18310					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2234985232353	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.429	1	67.752	67.252	68.252	0.32269								0	0	0	0.66222	1	28231	28231		0.69767	0.42865	1				15529	678	7211	7245	18311	18311					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2243224978447	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.098	1	72.423	71.923	72.923	0.32494								0	0	0	0.66222	1	30167	30167		0.69767	0.42865	1				15530	678	7211	7245	18312	18312					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2227050662041	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.442	1	73.767	73.267	74.267	0.32494								0	0	0	0.66222	1	30728	30728		0.69767	0.42865	1				15531	678	7211	7245	18313	18313					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2226135134697	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.927	1	76.249	75.749	76.749	0.32163								0	0	0	0.66222	1	31753	31753		0.69767	0	1				15532	678	7211	7245	18314	18314					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2235595583916	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.431	1	79.732	79.232	80.232	0.30047								0	0	0	0.66222	1	33211	33211		0.69767	0	1				15533	678	7211	7245	18315	18315					0.1276689912801885
KNPKIGGLPL	10	Unmodified	_KNPKIGGLPL_					0	0	0		ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	ENSG00000047365|ENST00000303965|ARAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2219726443291	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.321	1	93.489	92.989	93.989	0.16835								0	0	0	0.66222	1	39069	39069		0.69767	0	1				15534	678	7211	7245	18316	18316					0.1276689912801885
KNPKIPMSK	9	Unmodified	_KNPKIPMSK_					0	0	0		ENSG00000116254|ENST00000262450|CHD5;nc|ENSG00000170004|Q12873-2|CHD3;ENSG00000170004|ENST00000330494|CHD3;nc|ENSG00000170004|Q12873-3|CHD3	ENSG00000116254|ENST00000262450|CHD5	ENSG00000116254|ENST00000262450|CHD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2068359255791	3	348.207438	1041.60049	-1.6261	-0.00056623	-0.2141	-7.4551E-05	-1.8402	-0.00064078	348.20726117283294	32.311	1.1837	32.311	31.725	32.908	0					123	36	4	0	0	0	0.77876	1	13614	13614		4.1895	0.60244	1	5645800			15535	1963	7212	7246	18317	18317					0.08134966359216378
KNPKVARQ	8	Unmodified	_KNPKVARQ_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	314.1958190798759	3	314.194409	939.561398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.413	1	36.715	36.215	37.215	0.30197								0	0	0	1.0178	1	15312	15312		3.5965	1.9439	1		+		15536	11666	7213	7247	18318	18318					0.08920002119850778
KNPKVTGEL	9	Unmodified	_KNPKVTGEL_					0	0	0		tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1955444216728	3	329.194075	984.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.966	1	96.387	95.887	96.887	0.4212								0	0	0	0.42693	1	40382	40382		0.96228	0	1				15537	17116	7214	7248	18319	18319					0.06749742960300864
KNPKVTGEL	9	Unmodified	_KNPKVTGEL_					0	0	0		tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1952087283134	3	329.194075	984.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.089	1	96.511	96.011	97.011	0.4212								0	0	0	0.42693	1	40433	40433		0.96228	0	1				15538	17116	7214	7248	18320	18320					0.06749742960300864
KNPKVTGEL	9	Unmodified	_KNPKVTGEL_					0	0	0		tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	329.3235961794853	3	329.194075	984.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.122	1	60.091	59.591	60.591	1.969								0	0	0	0.42693	1	24382	24382		0.96228	0	1				15539	17116	7214	7248	18321	18321					0.06749742960300864
KNPKVTGEL	9	Unmodified	_KNPKVTGEL_					0	0	0		tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	tr|A0A7D6ZN19|A0A7D6ZN19_9CLOTBeta-propellerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14325PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	329.1949951052666	3	329.194075	984.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.553	1	98.81	98.31	99.31	0.25636								0	0	0	0.42693	1	41477	41477		0.96228	0	1				15540	17116	7214	7248	18322	18322					0.06749742960300864
KNPLILLLL	9	Unmodified	_KNPLILLLL_					0	0	0		ENST00000420010.6_1_16:84440201-84449139:+|nuORF;ENSG00000064270|ENST00000262429|ATP2C2;nc|ENSG00000064270|O75185-2|ATP2C2;nc|ENSG00000064270|O75185-3|ATP2C2	ENST00000420010.6_1_16:84440201-84449139:+|nuORF	ENST00000420010.6_1_16:84440201-84449139:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2418090701103	3	346.242477	1035.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.855	1	21.981	21.481	22.481	1.1254								0	0	0	0.42693	1	8697	8697		0.23584	0	1				15541	768	7215	7249	18323	18323					0.18917830827285798
KNPQTKQAQ	9	Unmodified	_KNPQTKQAQ_					0	0	0		ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	348.2012817263603	3	348.192845	1041.55671	1.6613	0.00057847	2.5623	0.00089217	4.2236	0.0014706	348.1939041584573	81.334	0.3293	81.624	81.462	81.791	0.29056					19	10	3	0	0	0	0.11941	1	33951	33951		1.0715	0.3738	1	1227900			15542	4521	7216	7250	18324	18324					0.037590731864384
KNPQTKQAQ	9	Unmodified	_KNPQTKQAQ_					0	0	0		ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	348.192845	1041.55671	-0.98278	-0.0003422	3.8827	0.0013519	2.8999	0.0010097	348.1941000196146	81.509	0.3526	81.509	81.349	81.701	0	-0.19026	-5.0729E-05	NaN	1.0715	18	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1297800			15543	4521	7216	7250							0.037590731864384
KNPQTKQAQ	9	Unmodified	_KNPQTKQAQ_					0	0	0		ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	348.192845	1041.55671	1.342	0.00046729	6.6158	0.0023036	7.9579	0.0027709	348.1958659706455	80.511	0.30553	81.763	81.544	81.85	1.2512	0.063421	0.0028043	NaN	1.0715	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	529120			15544	4521	7216	7250							0.037590731864384
KNPQTKQAQ	9	Unmodified	_KNPQTKQAQ_					0	0	0		ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	ENSG00000179674|ENST00000320767|ARL14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	348.192845	1041.55671	0.6491	0.00022601	7.7746	0.0027071	8.4237	0.0029331	348.1961152046532	80.184	0.20724	81.901	81.817	82.025	1.7167	0.20173	0.0040147	NaN	1.0715	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374590			15545	4521	7216	7250							0.037590731864384
KNPWKRARD	9	Unmodified	_KNPWKRARD_					0	0	0			REV__ENST00000498588.1_1_16:30671247-30671787:+|nuORF	REV__ENST00000498588.1_1_16:30671247-30671787:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2851440310478	3	390.887868	1169.64177	1.7627	0.00068903	4.2975	0.0016798	6.0602	0.0023689	390.8890245795708	46.612	0.5507	46.943	46.682	47.233	0.33034					24	18	2	0	0	0	0.11941	1	19674	19674		1.0715	0.29493	1	634860	+		15546	10522	7217	7251	18325	18325					0.06373863442877337
KNPYITKVL	9	Unmodified	_KNPYITKVL_					0	0	0		tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	tr|A0A7D6VSR3|A0A7D6VSR3_9CLOTAdenylosuccinatesynthetaseOS=ClostridiumintestinaleOX=36845GN=purAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.5553466677666	3	359.221853	1074.64373	1.2994	0.00046678	-3.4213	-0.001229	-2.1218	-0.00076221	359.2207844103514	85.331	0.31773	86.49	86.271	86.589	1.159					27	11	3	0	0	0	0.8462	1	35786	35786		1.0715	0.10919	1	4599800			15547	16881	7218	7252	18326	18326					0.10939479408125408
KNPYRLLVPQV	11	Unmodified	_KNPYRLLVPQV_					0	0	0			REV__ENSG00000087253|ENST00000262134|LPCAT2	REV__ENSG00000087253|ENST00000262134|LPCAT2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	442.3385192751884	3	442.934595	1325.78196	1.2361	0.00054749	-4.2146	-0.0018668	-2.9786	-0.0013193	442.93281206523903	96.56	0.24663	96.56	96.418	96.665	0					14	7	3	0	0	0	0.14606	1	40390	40390		1.3296	0.63198	1	2973600	+		15548	8867	7219	7253	18327	18327					0.13209602656593233
KNQEWLWMR	9	Unmodified	_KNQEWLWMR_					0	0	0		nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT;ENSG00000143437|ENST00000358595|ARNT	nc|ENSG00000143437|P27540-2|ARNT	nc|ENSG00000143437|P27540-2|ARNT	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.132	1	59.458	58.958	59.958	0.32553								0	0	0	0.42693	1	24780	24780		0.23584	0.076522	1				15549	3033	7220	7254	18328	18328					0.0006796813108849165
KNQEWLWMR	9	Unmodified	_KNQEWLWMR_					0	0	0		nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT;ENSG00000143437|ENST00000358595|ARNT	nc|ENSG00000143437|P27540-2|ARNT	nc|ENSG00000143437|P27540-2|ARNT	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8879272341728	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.231	1	59.557	59.057	60.057	0.32553								0	0	0	0.42693	1	24822	24822		0.23584	0.076522	1				15550	3033	7220	7254	18329	18329					0.0006796813108849165
KNQEWLWMR	9	Unmodified	_KNQEWLWMR_					0	0	0		nc|ENSG00000143437|P27540-2|ARNT;nc|ENSG00000143437|P27540-3|ARNT;nc|ENSG00000143437|P27540-4|ARNT;ENSG00000143437|ENST00000358595|ARNT	nc|ENSG00000143437|P27540-2|ARNT	nc|ENSG00000143437|P27540-2|ARNT	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.203	1	97.509	97.009	98.009	0.3062								0	0	0	0.42693	1	40888	40888		0.23584	0	1				15551	3033	7220	7254	18330	18330					0.0006796813108849165
KNQKKLLS	8	Unmodified	_KNQKKLLS_					0	0	0			REV__tr|A0A7D7A059|A0A7D7A059_9CLOTDUF421domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08645PE=3SV=1	REV__tr|A0A7D7A059|A0A7D7A059_9CLOTDUF421domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08645PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2058898806572	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.473	1	55.443	54.943	55.943	1.9697								0	0	0	1.0178	1	22404	22404		1.4819	0	1		+		15552	15806	7221	7255	18331	18331					0.11662039576845018
KNQRVVTKL	9	Unmodified	_KNQRVVTKL_					0	0	0			REV__ENSG00000130147|ENST00000392011|SH3BP4	REV__ENSG00000130147|ENST00000392011|SH3BP4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2534973025322	3	362.564502	1084.67168	1.6013	0.00058059	-3.1527	-0.001143	-1.5513	-0.00056245	362.56352723550015	79.944	0.31607	80.245	80.069	80.385	0.30046					15	9	2	0	0	0	0.11941	1	33410	33410		1.0715	0.61312	1	302330	+		15553	9767	7222	7256	18332	18332					0.1327280238822368
KNRAKGKA	8	Unmodified	_KNRAKGKA_					0	0	0		ENST00000473716.5_1_19:38708426-38709789:-|nuORF;nc|ENSG00000011332|Q92782-3|DPF1;nc|ENSG00000011332|Q92782-1|DPF1;ENSG00000011332|ENST00000355526|DPF1	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7758972048759	2	436.774868	871.535184	2.7407	0.0011971	-0.041041	-1.7926E-05	2.6997	0.0011792	436.77476511149257	71.995	1.1131	73.819	73.507	74.62	1.8239					86	35	5	0	0	0	0.89178	1	30288	30288		0.69038	0	1	171310000			15554	568	7223	7257	18333	18333					0.09427732948370249
KNRAKGKA	8	Unmodified	_KNRAKGKA_					0	0	0		ENST00000473716.5_1_19:38708426-38709789:-|nuORF;nc|ENSG00000011332|Q92782-3|DPF1;nc|ENSG00000011332|Q92782-1|DPF1;ENSG00000011332|ENST00000355526|DPF1	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7728759646416	2	436.774868	871.535184	1.9971	0.00087229	-2.7195	-0.0011878	-0.72239	-0.00031552	436.77300676120564	83.254	0.31586	84.891	84.694	85.01	1.6379					15	9	3	0	0	0	0.89178	1	34951	34951		0.69038	0	1	965100			15555	568	7223	7257	18334	18334					0.09427732948370249
KNRAKGKA	8	Unmodified	_KNRAKGKA_					0	0	0		ENST00000473716.5_1_19:38708426-38709789:-|nuORF;nc|ENSG00000011332|Q92782-3|DPF1;nc|ENSG00000011332|Q92782-1|DPF1;ENSG00000011332|ENST00000355526|DPF1	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	ENST00000473716.5_1_19:38708426-38709789:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	436.774868	871.535184	1.6656	0.00072749	-1.9796	-0.00086464	-0.314	-0.00013715	436.77351000324074	83.743	0.2536	84.931	84.796	85.05	1.1879	0.019891	0.00036717	NaN	0.69038	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	942810			15556	568	7223	7257							0.09427732948370249
KNRALPFV	8	Unmodified	_KNRALPFV_					0	0	0		ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1	ENSG00000077235|ENST00000356183|GTF3C1	ENSG00000077235|ENST00000356183|GTF3C1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.7117492556572	3	315.527388	943.560336	-0.087281	-2.754E-05	1.7045	0.0005378	1.6172	0.00051027	315.52797422320947	24.427	0.82277	26.111	25.568	26.391	1.6845					58	27	3	0	0	0	2.3239	1	10236	10236		1.4819	0	1	640890			15557	957	7224	7258	18335	18335					0.08629787750930973
KNRDFVFW	8	Unmodified	_KNRDFVFW_					0	0	0			REV__ENST00000486886.1_1_3:111680917-111693407:+|nuORF	REV__ENST00000486886.1_1_3:111680917-111693407:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1015197634697	3	371.194298	1110.56106	1.742	0.00064663	1.4613	0.00054241	3.2033	0.001189	371.1951204851601	70.258	0.25371	72.096	71.914	72.167	1.8378					11	7	2	0	0	0	2.3239	1	29470	29470		0.40072	0	1	315620	+		15558	10264	7225	7259	18336	18336					0.010205823999967834
KNRDRLTK	8	Unmodified	_KNRDRLTK_					0	0	0		tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2084228396416	3	344.208718	1029.60433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.491	1	93.491	92.991	93.991	0								0	0	0	1.0178	1	39074	39074		0.40072	0	1				15559	17008	7226	7260	18337	18337					0.09070772177256003
KNRDRLTK	8	Unmodified	_KNRDRLTK_					0	0	0		tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2075073122978	3	344.208718	1029.60433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.686	1	93.686	93.186	94.186	0								0	0	0	1.0178	1	39154	39154		0.40072	0	1				15560	17008	7226	7260	18338	18338					0.09070772177256003
KNRERRIRR	9	Unmodified	_KNRERRIRR_					0	0	0			REV__nc|ENSG00000170345|P01100-2|FOS	REV__nc|ENSG00000170345|P01100-2|FOS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	321.3007079958916	4	321.702443	1282.78067	1.2317	0.00039623	2.1936	0.00070569	3.4253	0.0011019	321.70350836896193	59.51	0.52943	60.93	60.738	61.267	1.4196					23	16	2	0	0	0	0.11955	1	24884	24884		0.23584	0.076522	1	447320	+		15561	10982	7227	7261	18339	18339					0.15058826131053138
KNRERRIRR	9	Unmodified	_KNRERRIRR_					0	0	0			REV__nc|ENSG00000170345|P01100-2|FOS	REV__nc|ENSG00000170345|P01100-2|FOS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	321.3005554080009	4	321.702443	1282.78067	1.8211	0.00058585	0.83617	0.000269	2.6573	0.00085484	321.70290127680846	58.943	0.47236	60.912	60.753	61.225	1.969					21	14	2	0	0	0	0.11955	1	24816	24816		0.23584	0.076522	1	533700	+		15562	10982	7227	7261	18340	18340					0.15058826131053138
KNRERYKKFKF	11	Unmodified	_KNRERYKKFKF_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|17|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|17|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.2277099490166	5	309.58294	1542.87832	-1.8955	-0.00058682	4.0198	0.0012445	2.1243	0.00065764	309.78474955770935	60.516	0.60451	60.516	60.287	60.892	0					21	18	2	0	0	0	0.14606	1	25385	25385		0.08335	0.08335	1	1241300	+		15563	14310	7228	7262	18341	18341					0.12859170216506755
KNRFIKWK	8	Unmodified	_KNRFIKWK_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.8968078494072	3	373.897704	1118.67128	0.21083	7.8828E-05	-1.9696	-0.00073644	-1.7588	-0.00065761	373.8966786807267	88.389	0.51817	88.389	88.15	88.668	0					52	16	4	0	0	0	0.89178	1	37035	37035		0.40072	0	1	15634000	+		15564	15091	7229	7263	18342	18342					0.11669427459014514
KNRFIKWK	8	Unmodified	_KNRFIKWK_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	373.897704	1118.67128	2.4646	0.00092149	-2.977	-0.0011131	-0.51246	-0.00019161	373.896249525687	88.228	0.5611	88.462	88.228	88.789	0.23471	-0.095758	-0.00027774	NaN	0.40072	50	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16759000	+		15565	15091	7229	7263							0.11669427459014514
KNRFIKWK	8	Unmodified	_KNRFIKWK_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	373.897704	1118.67128	3.7387	0.0013979	-2.2799	-0.00085247	1.4588	0.00054544	373.89647876171597	87.537	0.52817	88.629	88.335	88.863	1.0918	0.070894	0.00050415	NaN	0.40072	47	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13593000	+		15566	15091	7229	7263							0.11669427459014514
KNRFIKWK	8	Unmodified	_KNRFIKWK_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	373.897704	1118.67128	4.3639	0.0016317	-3.8911	-0.0014549	0.47278	0.00017677	373.8957720846015	87.257	0.55872	88.752	88.456	89.015	1.4953	0.1943	-0.0013031	NaN	0.40072	47	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8003400	+		15567	15091	7229	7263							0.11669427459014514
KNRGIAIPV	9	Unmodified	_KNRGIAIPV_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MSMS	GG20161007_CRH_Patient100_A02_01	1	323.2073852419853	3	323.206426	966.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.444	1	64.444	63.944	64.944	0								0	0	0	0.42693	1	26865	26865		1.0715	0.61312	1				15568	2180	7230	7264	18343	18343					0.11281459296696994
KNRGIAIPV	9	Unmodified	_KNRGIAIPV_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MSMS	GG20161007_CRH_Patient100_W632_02	4	323.2066528201103	3	323.206426	966.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.198	1	63.163	62.663	63.663	1.9653								0	0	0	0.42693	1	25681	25681		1.0715	0.61312	1				15569	2180	7230	7264	18344	18344					0.11281459296696994
KNRGRLIGGLP	11	Unmodified	_KNRGRLIGGLP_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2;ENST00000520779.1_1_8:2088796-2113099:+|nuORF	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2473937869072	3	394.247285	1179.72002	0.55191	0.00021759	-0.23778	-9.3743E-05	0.31413	0.00012384	394.2470764659531	90.454	1.5663	90.454	90.095	91.662	0					97	49	5	0	0	0	1.039	1	37833	37833		0.45452	0.45452	1	33909000			15570	647	7231	7265	18345	18345					0.13735296028130506
KNRHQDVM	8	Unmodified	_KNRHQDVM_					0	0	0		PTPN23|p.L1259Afs*14|1|0.14|ENSG00000076201|chr3:47411565-47411566|-/C|frameshift_variant;PTPN23|p.R1398Cfs*54|1|0.11|ENSG00000076201|chr3:47412295-47412296|-/TG|frameshift_variant;ENSG00000076201|ENST00000265562|PTPN23	PTPN23|p.L1259Afs*14|1|0.14|ENSG00000076201|chr3:47411565-47411566|-/C|frameshift_variant	PTPN23|p.L1259Afs*14|1|0.14|ENSG00000076201|chr3:47411565-47411566|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1749755740166	3	343.174909	1026.5029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.299	1	77.299	76.799	77.799	0								0	0	0	1.0178	1	32178	32178		0.40072	0	1				15571	945	7232	7266	18346	18346					-0.009294225169242054
KNRKKKKKNYL	11	Unmodified	_KNRKKKKKNYL_					0	0	0		Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2538635134697	4	362.735952	1446.9147	1.4405	0.00052254	-3.4567	-0.0012539	-2.0162	-0.00073134	362.9855565904487	41.817	1.6835	43.71	42.515	44.199	1.8927					65	53	2	0	0	0	0.14606	1	17594	17594		0.08335	0.08335	1	1266500			15572	16022	7233	7267	18347	18347					0.20912047113279186
KNRKKKKKNYL	11	Unmodified	_KNRKKKKKNYL_					0	0	0		Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	Tigger1_dup11946|chr22:15828868-15829349:-|2.0143775268303656|0.126984307270513|3.99|417.0|22|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2535583376884	4	362.735952	1446.9147	1.9473	0.00070636	-1.0597	-0.00038441	0.88756	0.00032195	362.9863063303689	47.091	0.19254	49.067	48.902	49.094	1.976					7	5	2	0	0	0	0.14606	1	19716	19716		0.40827	0.32491	1	174430			15573	16022	7233	7267	18348	18348					0.20912047113279186
KNRLDQYME	9	Unmodified	_KNRLDQYME_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2517883181572	3	399.529129	1195.56556	1.697	0.00067802	-3.0273	-0.0012095	-1.3302	-0.00053147	399.52933384195575	68.622	0.40353	69.987	69.816	70.22	1.3657					23	12	3	0	0	0	0.11944	1	28876	28876		0.96228	0.82238	1	438290	+		15574	10597	7234	7268	18349	18349					-0.024403212394190632
KNRLDQYME	9	Unmodified	_KNRLDQYME_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	399.529129	1195.56556	2.1359	0.00085336	-0.44954	-0.0001796	1.6864	0.00067376	399.52868911541964	68.143	0.27887	70.013	69.858	70.137	1.87	0.013025	0.00077003	NaN	0.96228	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455570	+		15575	10597	7234	7268							-0.024403212394190632
KNRLRSLGP	9	Unmodified	_KNRLRSLGP_					0	0	0			REV__ENSG00000070366|ENST00000263073|SMG6	REV__ENSG00000070366|ENST00000263073|SMG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5473205447197	3	347.548964	1039.62506	0.61578	0.00021402	-2.0184	-0.00070151	-1.4027	-0.00048749	347.54824695628696	42.24	0.75204	43.58	43.201	43.953	1.3399					44	23	3	0	0	0	0.78661	1	17626	17626		3.8763	0.59502	1	3087400	+		15576	8716	7235	7269	18350	18350					0.10683362556960674
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2514526247978	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.195	1	58.195	57.695	58.695	0								0	0	0	0.42693	1	24278	24278		0.96228	0	1		+		15577	9169	7236	7270	18351	18351					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2508727908134	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.951	1	68.951	68.451	69.451	0								0	0	0	0.42693	1	28714	28714		0.96228	0	1		+		15578	9169	7236	7270	18352	18352					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2516052126884	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.886	1	73.886	73.386	74.386	0								0	0	0	0.42693	1	30768	30768		0.96228	0	1		+		15579	9169	7236	7270	18353	18353					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2537414431572	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.12	1	79.12	78.62	79.62	0								0	0	0	0.42693	1	32942	32942		0.96228	0	1		+		15580	9169	7236	7270	18354	18354					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2530090212822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.555	1	79.555	79.055	80.055	0								0	0	0	0.42693	1	33126	33126		1.0715	0.10919	1		+		15581	9169	7236	7270	18355	18355					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2517883181572	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.882	1	90.882	90.382	91.382	0								0	0	0	0.42693	1	37984	37984		0.96228	0	1		+		15582	9169	7236	7270	18356	18356					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2505065798759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.91	1	38.215	37.715	38.715	0.30497								0	0	0	0.42693	1	15946	15946		0.96228	0	1		+		15583	9169	7236	7270	18357	18357					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508727908134	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.203	1	70.526	70.026	71.026	0.32224								0	0	0	0.42693	1	29384	29384		0.96228	0	1		+		15584	9169	7236	7270	18358	18358					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2515136599541	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.588	1	73.913	73.413	74.413	0.32494								0	0	0	0.42693	1	30788	30788		0.96228	0	1		+		15585	9169	7236	7270	18359	18359					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2518798708916	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.553	1	84.814	84.314	85.314	0.26083								0	0	0	0.42693	1	35360	35360		0.96228	0.33545	1		+		15586	9169	7236	7270	18360	18360					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2521240115166	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.966	1	90.175	89.675	90.675	0.20904								0	0	0	0.42693	1	37700	37700		0.96228	0	1		+		15587	9169	7236	7270	18361	18361					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2524291872978	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.86	1	112.9	112.4	113.4	0.044189								0	0	0	0.42693	1	48626	48626		0.96228	0.33545	1		+		15588	9169	7236	7270	18362	18362					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508117556572	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.07	1	117.11	116.61	117.61	0.041039								0	0	0	0.42693	1	50320	50320		0.26902	0	1		+		15589	9169	7236	7270	18363	18363					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2514831423759	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.553	1	55.957	55.457	56.457	1.4048								0	0	0	0.42693	1	22831	22831		0.96228	0	1		+		15590	9169	7236	7270	18364	18364					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509033083916	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.551	1	59.969	59.469	60.469	1.4181								0	0	0	0.42693	1	24548	24548		0.96228	0	1		+		15591	9169	7236	7270	18365	18365					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2515441775322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.756	1	71.11	70.61	71.61	1.3536								0	0	0	0.42693	1	29279	29279		0.96228	0	1		+		15592	9169	7236	7270	18366	18366					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509033083916	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.458	1	71.812	71.312	72.312	1.3536								0	0	0	0.42693	1	29569	29569		0.96228	0	1		+		15593	9169	7236	7270	18367	18367					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513610720634	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.714	1	78.995	78.495	79.495	1.2809								0	0	0	0.42693	1	32614	32614		1.0715	0	1		+		15594	9169	7236	7270	18368	18368					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2516662478447	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.397	1	81.649	81.149	82.149	1.2512								0	0	0	0.42693	1	33744	33744		0.96228	0.33545	1		+		15595	9169	7236	7270	18369	18369					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2515746951103	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.135	1	83.347	82.847	83.847	1.2125								0	0	0	0.42693	1	34481	34481		0.96228	0.33545	1		+		15596	9169	7236	7270	18370	18370					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2525207400322	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.447	1	91.429	90.929	91.929	0.98157								0	0	0	0.42693	1	38107	38107		2.4985	0.75621	1		+		15597	9169	7236	7270	18371	18371					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2519409060478	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.835	1	91.816	91.316	92.316	0.98157								0	0	0	0.42693	1	38265	38265		0.96228	0	1		+		15598	9169	7236	7270	18372	18372					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2515746951103	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.522	1	94.394	93.894	94.894	0.87176								0	0	0	0.42693	1	39358	39358		0.96228	0	1		+		15599	9169	7236	7270	18373	18373					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507507205009	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.03	1	114.21	113.71	114.71	0.17579								0	0	0	0.42693	1	49421	49421		0.96228	0	1		+		15600	9169	7236	7270	18374	18374					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510558962822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.58	1	50.557	50.057	51.057	1.9772								0	0	0	0.42693	1	20348	20348		0.96228	0	1		+		15601	9169	7236	7270	18375	18375					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520934939384	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.901	1	60.87	60.37	61.37	1.969								0	0	0	0.42693	1	24714	24714		0.96228	0	1		+		15602	9169	7236	7270	18376	18376					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2516052126884	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.494	1	71.347	70.847	71.847	1.853								0	0	0	0.42693	1	29159	29159		0.96228	0	1		+		15603	9169	7236	7270	18377	18377					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2518493533134	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.575	1	75.371	74.871	75.871	1.7962								0	0	0	0.42693	1	30863	30863		0.96228	0	1		+		15604	9169	7236	7270	18378	18378					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2517272830009	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.858	1	77.625	77.125	78.125	1.7672								0	0	0	0.42693	1	31827	31827		0.96228	0	1		+		15605	9169	7236	7270	18379	18379					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2519103884697	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.342	1	80.077	79.577	80.577	1.735								0	0	0	0.42693	1	32858	32858		0.96228	0.33545	1		+		15606	9169	7236	7270	18380	18380					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2517578005791	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.75	1	86.346	85.846	86.846	1.5962								0	0	0	0.42693	1	35547	35547		0.96228	0	1		+		15607	9169	7236	7270	18381	18381					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520324587822	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.985	1	88.48	87.98	88.98	1.4953								0	0	0	0.42693	1	36673	36673		0.96228	0.18574	1		+		15608	9169	7236	7270	18382	18382					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2514526247978	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.598	1	90.045	89.545	90.545	1.4467								0	0	0	0.42693	1	37336	37336		0.96228	0	1		+		15609	9169	7236	7270	18383	18383					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2516662478447	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.689	1	92.055	91.555	92.555	1.366								0	0	0	0.42693	1	38192	38192		0.96228	0	1		+		15610	9169	7236	7270	18384	18384					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2515746951103	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.377	1	93.704	93.204	94.204	1.3269								0	0	0	0.42693	1	38885	38885		0.96228	0	1		+		15611	9169	7236	7270	18385	18385					0.13866287788118825
KNRPGRRRR	9	Unmodified	_KNRPGRRRR_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2518798708916	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.945	1	94.222	93.722	94.722	1.277								0	0	0	0.42693	1	39114	39114		0.96228	0	1		+		15612	9169	7236	7270	18386	18386					0.13866287788118825
KNRPLKGRIN	10	Unmodified	_KNRPLKGRIN_					0	0	0		ENST00000513048.5_1_5:79929804-79945299:-|nuORF;ENST00000513314.1_1_5:79945206-79949851:-|nuORF;nc|ENSG00000228716|P00374-2|DHFR;ENSG00000228716|ENST00000439211|DHFR	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505981326103	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.313	1	19.761	19.261	20.261	1.448								0	0	0	0.66222	1	7616	7616		0.69767	0.19171	1				15613	5300	7237	7271	18387	18387					0.14134698402426693
KNRPLKGRIN	10	Unmodified	_KNRPLKGRIN_					0	0	0		ENST00000513048.5_1_5:79929804-79945299:-|nuORF;ENST00000513314.1_1_5:79945206-79949851:-|nuORF;nc|ENSG00000228716|P00374-2|DHFR;ENSG00000228716|ENST00000439211|DHFR	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510558962822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.73	1	20.178	19.678	20.678	1.448								0	0	0	0.66222	1	7789	7789		0.69767	0.19171	1				15614	5300	7237	7271	18388	18388					0.14134698402426693
KNRPLKGRIN	10	Unmodified	_KNRPLKGRIN_					0	0	0		ENST00000513048.5_1_5:79929804-79945299:-|nuORF;ENST00000513314.1_1_5:79945206-79949851:-|nuORF;nc|ENSG00000228716|P00374-2|DHFR;ENSG00000228716|ENST00000439211|DHFR	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	ENST00000513048.5_1_5:79929804-79945299:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505676150322	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.194	1	20.718	20.218	21.218	1.5237								0	0	0	0.66222	1	7979	7979		0.69767	0.42865	1				15615	5300	7237	7271	18389	18389					0.14134698402426693
KNRRAKLA	8	Unmodified	_KNRRAKLA_					0	0	0		nc|ENSG00000259009|P0DV77|TPRX2;nc|ENSG00000178928|Q8N7U7-2|TPRX1;nc|ENSG00000178928|Q8N7U7|TPRX1;ENSG00000178928|ENST00000698655|TPRX1	nc|ENSG00000259009|P0DV77|TPRX2	nc|ENSG00000259009|P0DV77|TPRX2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0553771853447	3	319.54192	955.603932	-2.7907	-0.00089176	-0.24736	-7.9043E-05	-3.0381	-0.0009708	319.5407190589697	27.413	0.45634	27.413	27.075	27.532	0					20	14	2	0	0	0	2.3239	1	11460	11460		0	0	1	413060			15616	4495	7238	7272	18390	18390					0.12435397248066238
KNRRKKRRISY	11	Unmodified	_KNRRKKRRISY_					0	0	0		ENST00000528037.1_1_11:61891511-61905356:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP;INCENP|p.S831Pfs*85|1|0.08|ENSG00000149503|chr11:62150156-62150156|T/-|frameshift_variant;ENSG00000149503|ENST00000394818|INCENP	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2436706423759	4	376.987838	1503.92225	1.6141	0.0006085	4.0196	0.0015153	5.6337	0.0021238	377.24080307055647	49.81	0.83337	50.14	49.651	50.484	0.33019					52	26	3	0	0	0	1.0402	1	21005	21005		0.08335	0.08335	1	1606200			15617	3241	7239	7273	18391	18391					0.19044199433551512
KNRRKKRRISY	11	Unmodified	_KNRRKKRRISY_					0	0	0		ENST00000528037.1_1_11:61891511-61905356:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP;INCENP|p.S831Pfs*85|1|0.08|ENSG00000149503|chr11:62150156-62150156|T/-|frameshift_variant;ENSG00000149503|ENST00000394818|INCENP	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	376.987838	1503.92225	0.5391	0.00020324	5.107	0.0019253	5.6461	0.0021285	377.2411900371754	48.735	0.64935	50.123	49.895	50.544	1.388	-0.044857	0.0015593	NaN	0.08335	43	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1679900			15618	3241	7239	7273							0.19044199433551512
KNRRKKRRISY	11	Unmodified	_KNRRKKRRISY_					0	0	0		ENST00000528037.1_1_11:61891511-61905356:+|nuORF;nc|ENSG00000149503|Q9NQS7-2|INCENP;INCENP|p.S831Pfs*85|1|0.08|ENSG00000149503|chr11:62150156-62150156|T/-|frameshift_variant;ENSG00000149503|ENST00000394818|INCENP	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	ENST00000528037.1_1_11:61891511-61905356:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	376.987838	1503.92225	1.964	0.00074039	2.9217	0.0011014	4.8857	0.0018418	377.2404380302703	48.263	0.64531	50.24	49.744	50.39	1.9772	0.072329	-0.001736	NaN	0.08335	49	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1656000			15619	3241	7239	7273							0.19044199433551512
KNRRRRSLH	9	Unmodified	_KNRRRRSLH_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	408.2247497439384	3	408.249911	1221.7279	1.0185	0.00041582	3.2825	0.0013401	4.301	0.0017559	408.25139008934684	89.889	0.79268	89.889	89.495	90.288	0					40	24	2	0	0	0	0.11955	1	37424	37424		0.23584	0.076522	1	646750	+		15620	9687	7240	7274	18392	18392					0.12590868068264172
KNRSDCVGHG	10	Unmodified	_KNRSDCVGHG_					0	0	0			REV__ENSG00000197140|ENST00000379907|ADAM32	REV__ENSG00000197140|ENST00000379907|ADAM32	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	358.1478149294853	3	358.169935	1071.48798	1.3537	0.00048486	-1.4219	-0.00050928	-0.068172	-2.4417E-05	358.1686204835359	65.841	0.18283	67.75	67.616	67.799	1.9085					7	5	2	0	0	0	0.1256	1	27592	27592		0.69767	0.23933	1	296580	+		15621	11660	7241	7275	18393	18393					-0.04490914384928146
KNRVVNGD	8	Unmodified	_KNRVVNGD_					0	0	0			REV__ENSG00000280670|ENST00000629482|CCDC163	REV__ENSG00000280670|ENST00000629482|CCDC163	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1653320193291	3	301.166519	900.477728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.58	1	95.58	95.08	96.08	0								0	0	0	1.0178	1	39951	39951		1.6526	0.17072	1		+		15622	12028	7242	7276	18394	18394					0.023508459521394798
KNSEILKPHR	10	Unmodified	_KNSEILKPHR_					0	0	0		ENSG00000196152|ENST00000342483|ZNF79	ENSG00000196152|ENST00000342483|ZNF79	ENSG00000196152|ENST00000342483|ZNF79	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	407.9067870974541	3	407.906928	1220.69895	0.55651	0.000227	1.0666	0.00043509	1.6232	0.0006621	407.90737489620136	93.78	0.44163	93.78	93.584	94.025	0					22	13	3	0	0	0	0.8882	1	39189	39189		2.8433	2.1456	1	791940			15623	4916	7243	7277	18395	18395					0.09743285928584555
KNSHLKKSAF	10	Unmodified	_KNSHLKKSAF_					0	0	0		nc|ENSG00000146278|Q12796-2|PNRC1;ENSG00000146278|ENST00000336032|PNRC1	nc|ENSG00000146278|Q12796-2|PNRC1	nc|ENSG00000146278|Q12796-2|PNRC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	580.3359252810478	2	580.332747	1158.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.577	1	97.577	97.077	98.077	0								0	0	0	0.66185	1	40795	40795		1.3295	0.63916	1				15624	3145	7244	7278	18396	18396					0.07796212008565817
KNSLTPHVF	9	Unmodified	_KNSLTPHVF_					0	0	0			REV__ENST00000507635.5_1_5:137780026-137781437:+|nuORF	REV__ENST00000507635.5_1_5:137780026-137781437:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	348.1938964724541	3	348.194186	1041.56073	-0.98278	-0.0003422	0.031582	1.0997E-05	-0.9512	-0.0003312	348.1941000196146	81.509	0.3526	81.509	81.349	81.701	0					18	11	3	0	0	0	0.83213	1	33985	33985		1.0715	0	1	1297800	+		15625	9851	7245	7279	18397	18397					0.04161162680134112
KNSPGQYI	8	Unmodified	_KNSPGQYI_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7412902712822	2	453.737617	905.460681	3.0987	0.001406	1.8053	0.00081913	4.904	0.0022251	453.7394979476344	62.337	0.43503	63.755	63.556	63.992	1.4177					40	13	4	0	0	0	0.89008	1	26140	26140		2.5775	0	1	1620900			15626	3272	7246	7280	18398	18398					0.004169253463260247
KNSRKPPA	8	Unmodified	_KNSRKPPA_					0	0	0			REV__ENST00000441308.1_1_20:10367413-10367935:+|nuORF	REV__ENST00000441308.1_1_20:10367413-10367935:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	449.2676269412041	2	449.266876	896.519199	1.6238	0.00072951	0.1852	8.3203E-05	1.809	0.00081272	449.2669508801014	73.169	1.0505	73.169	72.684	73.734	0					80	33	3	0	0	0	0.89051	2	30393	30393;30495		2.3027	0	1	2611200	+		15627	13086	7247	7281	18399;18400	18399					0.06680026711467235
KNSSLIWTL	9	Unmodified	_KNSSLIWTL_					0	0	0			REV__ENST00000511171.5_1_6:33747875-33748949:-|nuORF	REV__ENST00000511171.5_1_6:33747875-33748949:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3032104372978	2	531.303124	1060.5917	2.6947	0.0014317	-0.89758	-0.00047689	1.7971	0.00095483	531.3021046710595	71.083	0.51727	72.424	72.054	72.571	1.3415					24	11	3	0	0	0	0.46905	1	29788	29788		16.942	1.0951	1	3630900	+		15628	10626	7248	7282	18401	18401					0.06382315994369492
KNSSPRGCGPS	11	Unmodified	_KNSSPRGCGPS_					0	0	0			REV__nc|ENSG00000260528|P0CG43|FAM157C	REV__nc|ENSG00000260528|P0CG43|FAM157C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2534057497978	3	363.841707	1088.50329	1.0792	0.00039267	3.7783	0.0013747	4.8576	0.0017674	363.84345015581647	68.52	0.21297	69.885	69.784	69.997	1.3657					11	6	2	0	0	0	0.14606	1	28771	28771		0.40827	0.0075492	1	313100	+		15629	14557	7249	7283	18402	18402					-0.03742047587752495
KNSTPNEDEIR	11	Unmodified	_KNSTPNEDEIR_					0	0	0		tr|A0A7D6VTA5|A0A7D6VTA5_9CLOT(2Fe-2S)-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02100PE=4SV=1	tr|A0A7D6VTA5|A0A7D6VTA5_9CLOT(2Fe-2S)-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02100PE=4SV=1	tr|A0A7D6VTA5|A0A7D6VTA5_9CLOT(2Fe-2S)-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02100PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8832885622978	3	434.880996	1301.62116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.536	1	23.751	23.251	24.251	1.2145								0	0	0	0.63775	1	9416	9416		0.36667	0.13083	1				15630	16909	7250	7284	18403	18403					-0.01758816518099593
KNTAAALP	8	Unmodified	_KNTAAALP_					0	0	0		nc|ENSG00000166436|O15016-3|TRIM66;ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-2|TRIM66;nc|ENSG00000166436|O15016|TRIM66;ENSG00000166436|ENST00000646038|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2285339236259	2	393.229428	784.444303	-0.014184	-5.5775E-06	-2.1787	-0.00085674	-2.1929	-0.00086231	393.2284845639437	66.653	0.57468	66.653	66.35	66.924	0					35	17	3	0	0	0	0.89008	1	27767	27767		2.5775	0.27475	1	6423000			15631	3902	7251	7285	18404	18404					0.04345844180215863
KNTAIVIT	8	Unmodified	_KNTAIVIT_					0	0	0		nc|ENSG00000095110|Q8N323-2|NXPE1;ENSG00000095110|ENST00000534921|NXPE1;ENSG00000204361|ENST00000389586|NXPE2	nc|ENSG00000095110|Q8N323-2|NXPE1	nc|ENSG00000095110|Q8N323-2|NXPE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.2650939822197	2	430.26601	858.517468	1.006	0.00043285	-2.6411	-0.0011364	-1.6351	-0.00070351	430.26480921746594	71.908	0.47409	71.908	71.668	72.142	0					37	14	4	0	0	0	0.8909	1	29946	29946		2.0598	0	1	12371000			15632	1182	7252	7286	18405	18405					0.08254972902830104
KNTAIVIT	8	Unmodified	_KNTAIVIT_					0	0	0		nc|ENSG00000095110|Q8N323-2|NXPE1;ENSG00000095110|ENST00000534921|NXPE1;ENSG00000204361|ENST00000389586|NXPE2	nc|ENSG00000095110|Q8N323-2|NXPE1	nc|ENSG00000095110|Q8N323-2|NXPE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2661620974541	2	430.26601	858.517468	2.0761	0.00089328	-2.0185	-0.00086848	0.057641	2.4801E-05	430.26512130102367	71.672	0.6675	71.996	71.751	72.418	0.32359					54	20	4	0	0	0	0.8909	1	30044	30044		2.0598	0	1	14577000			15633	1182	7252	7286	18406	18406					0.08254972902830104
KNTAIVIT	8	Unmodified	_KNTAIVIT_					0	0	0		nc|ENSG00000095110|Q8N323-2|NXPE1;ENSG00000095110|ENST00000534921|NXPE1;ENSG00000204361|ENST00000389586|NXPE2	nc|ENSG00000095110|Q8N323-2|NXPE1	nc|ENSG00000095110|Q8N323-2|NXPE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	430.2664367556572	2	430.26601	858.517468	3.0804	0.0013254	-2.1005	-0.00090376	0.97994	0.00042164	430.2649016312039	70.788	0.37532	72.142	71.97	72.345	1.3536					28	11	3	0	0	0	0.8909	2	29694	29694;29748		2.0598	0	1	5556200			15634	1182	7252	7286	18407;18408	18407					0.08254972902830104
KNTDGPRE	8	Unmodified	_KNTDGPRE_					0	0	0			REV__ENST00000591919.5_1_19:4445233-4445461:-|nuORF	REV__ENST00000591919.5_1_19:4445233-4445461:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1937133669853	3	306.154279	915.441008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.201	1	44.528	44.028	45.028	0.32674								0	0	0	1.0178	1	18557	18557		1.6526	0	1		+		15635	14072	7253	7287	18409	18409					-0.020094506644227295
KNTKIIGIQK	10	Unmodified	_KNTKIIGIQK_					0	0	0			REV__nc|ENSG00000089280|P35637-2|FUS	REV__nc|ENSG00000089280|P35637-2|FUS	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5140258669853	3	381.580041	1141.71829	-0.45981	-0.00017546	4.2192	0.0016099	3.7593	0.0014345	381.58122052091613	70.521	0.26865	70.521	70.449	70.718	0					12	8	2	0	0	0	0.12551	1	29435	29435		3.3196	1.5774	1	556780	+		15636	8884	7254	7288	18410	18410					0.15310242219493375
KNTKIIGIQK	10	Unmodified	_KNTKIIGIQK_					0	0	0			REV__nc|ENSG00000089280|P35637-2|FUS	REV__nc|ENSG00000089280|P35637-2|FUS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5793334841728	3	381.580041	1141.71829	0.5019	0.00019151	0.35827	0.00013671	0.86017	0.00032823	381.9144688394415	36.919	0.34377	38.737	38.703	39.047	1.8176					21	15	2	0	0	0	0.86984	1	15491	15491		4.7159	1.6437	1	1569700	+		15637	8884	7254	7288	18411	18411					0.15310242219493375
KNTKIIPV	8	Unmodified	_KNTKIIPV_					0	0	0			REV__tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	REV__tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5367004275322	3	304.867411	911.580402	0.13193	4.0221E-05	-1.2387	-0.00037764	-1.1068	-0.00033742	304.8673283572001	24.436	0.20953	24.679	24.564	24.774	0.24251					9	6	2	0	0	0	2.3239	1	10185	10185		1.3295	0	1	1071700	+		15638	15691	7255	7289	18412	18412					0.1210753869089558
KNTKLSSKT	9	Unmodified	_KNTKLSSKT_					0	0	0		chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000602762.5_1_2:181846769-181940241:+|nuORF	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2016174197197	3	336.201229	1005.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.108	1	32.933	32.433	33.433	1.8246								0	0	0	0.42693	1	13040	13040		2.2828	0.80087	1				15639	237	7256	7290	18413	18413					0.07929127989007156
KNTKLVKKIDH	11	Unmodified	_KNTKLVKKIDH_					0	0	0		ENSG00000080709|ENST00000673685|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;nc|ENSG00000080709|Q9H2S1-2|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7071716189384	4	331.708131	1322.80342	-1.6841	-0.00055862	-1.1106	-0.00036841	-2.7947	-0.00092703	331.7077939016305	45.636	0.79131	45.636	45.312	46.103	0					46	24	2	0	0	0	1.0224	1	19241	19241		2.4348	0.18206	1	4433400			15640	1007	7257	7291	18414	18414					0.15492987685320259
KNTKLVKKIDH	11	Unmodified	_KNTKLVKKIDH_					0	0	0		ENSG00000080709|ENST00000673685|KCNN2;nc|ENSG00000080709|Q9H2S1|KCNN2;nc|ENSG00000080709|Q9H2S1-2|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	ENSG00000080709|ENST00000673685|KCNN2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	332.2067443728447	4	331.708131	1322.80342	-1.6612	-0.00055103	0.035742	1.1856E-05	-1.6254	-0.00053917	331.70810825218354	46.337	0.37952	46.337	46.103	46.482	0					22	11	2	0	0	0	0.14606	1	19296	19296		1.1098	0.48293	1	2634000			15641	1007	7257	7291	18415	18415					0.15492987685320259
KNTKNKRAL	9	Unmodified	_KNTKNKRAL_					0	0	0			REV__ENST00000327111.7_1_5:92929661-92929820:+|nuORF	REV__ENST00000327111.7_1_5:92929661-92929820:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.2221862673759	3	358.224368	1071.65128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.406	1	70.406	69.906	70.906	0								0	0	0	0.42693	1	29319	29319		1.0715	0.10919	1		+		15642	12434	7258	7292	18416	18416					0.11831631728409775
KNTLKRLNKEI	11	Unmodified	_KNTLKRLNKEI_					0	0	0			REV__tr|A0A7D6VU07|A0A7D6VU07_9CLOTBMPfamilyABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05135PE=3SV=1	REV__tr|A0A7D6VU07|A0A7D6VU07_9CLOTBMPfamilyABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05135PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.9487487673759	3	452.948904	1355.82488	3.2895	0.00149	-2.3939	-0.0010843	0.89559	0.00040566	452.94779924096184	96.665	0.27547	96.77	96.635	96.91	0.105					28	8	5	0	0	0	1.0174	1	40430	40430		1.1098	0.48293	1	51818000	+		15643	15507	7259	7293	18417	18417					0.1612037271402187
KNTLKSMK	8	Unmodified	_KNTLKSMK_					0	0	0			REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	REV__tr|A0A7D6VY27|A0A7D6VY27_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14230PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1869994997978	3	317.188155	948.542637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.241	1	52.634	52.134	53.134	1.3938								0	0	0	1.0178	1	21454	21454		3.2813	1.4371	1		+		15644	15556	7260	7294	18418	18418					0.06630704433780465
KNTLKTSAAT	10	Unmodified	_KNTLKTSAAT_					0	0	0		ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	ENSG00000111647|ENST00000279907|BLTP3B	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.5340453982353	3	345.532868	1033.57677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.572	1	51.966	51.466	52.466	1.3938								0	0	0	0.6607	1	21167	21167		1.5923	0.48253	1				15645	1748	7261	7295	18419	18419					0.061328241263481686
KNTPSAPA	8	Unmodified	_KNTPSAPA_					0	0	0			REV__BAIAP2-RPTOR|1|fusion	REV__BAIAP2-RPTOR|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2111083865166	2	393.211235	784.407917	0.42241	0.0001661	-1.9093	-0.00075075	-1.4869	-0.00058465	393.2105821029052	62.392	0.27976	62.392	62.274	62.554	0					16	8	3	0	0	0	0.89178	2	26019	26019;26066		0.69038	0	1	572950	+		15646	8159	7262	7296	18420;18421	18420					0.007089672835036254
KNTSTKKT	8	Unmodified	_KNTSTKKT_					0	0	0			REV__tr|A0A7D6VT41|A0A7D6VT41_9CLOTSporulationproteinYunBOS=ClostridiumintestinaleOX=36845GN=yunBPE=4SV=1	REV__tr|A0A7D6VT41|A0A7D6VT41_9CLOTSporulationproteinYunBOS=ClostridiumintestinaleOX=36845GN=yunBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.3224365115166	3	303.178425	906.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.676	1	52.999	52.499	53.499	0.32283								0	0	0	1.0178	1	22069	22069		0.40072	0	1		+		15647	15473	7263	7297	18422	18422					0.056448834091384015
KNTTKLSMKI	10	Unmodified	_KNTTKLSMKI_					0	0	0		tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1274597048759	3	388.565403	1162.67438	1.2336	0.00047934	0.62412	0.00024251	1.8577	0.00072185	388.56553858880125	50.158	1.2514	52.135	51.601	52.853	1.9772					86	40	3	0	0	0	0.12551	1	20828	20828		0.10794	0	1	4056200			15648	16682	7264	7298	18423	18423					0.09954889730875038
KNVAKPLIGP	10	Unmodified	_KNVAKPLIGP_					0	0	0		ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	ENST00000510175.5_1_4:155055-155787:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2235595583916	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.394	1	72.719	72.219	73.219	0.32494								0	0	0	0.66222	1	30288	30288		0.69767	0.42865	1				15649	7026	7265	7299	18424	18424					0.12766899127996112
KNVFFNVNDL	10	Unmodified	_KNVFFNVNDL_					0	0	0			REV__tr|A0A7D6W0A9|A0A7D6W0A9_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22660PE=4SV=1	REV__tr|A0A7D6W0A9|A0A7D6W0A9_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22660PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	605.7735473513603	2	605.316763	1208.61897	1.8711	0.0011326	2.1571	0.0013057	4.0282	0.0024384	605.3184744184374	42.763	0.24017	44.684	44.57	44.811	1.9211					19	7	3	0	0	0	0.12399	1	17885	17885		22.736	3.4793	1	1552200	+		15650	15577	7266	7300	18425	18425					0.023007995347825272
KNVGKRAP	8	Unmodified	_KNVGKRAP_					0	0	0		tr|A0A7D6ZFR4|A0A7D6ZFR4_9CLOTGlycosyltransferasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18960PE=4SV=1	tr|A0A7D6ZFR4|A0A7D6ZFR4_9CLOTGlycosyltransferasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18960PE=4SV=1	tr|A0A7D6ZFR4|A0A7D6ZFR4_9CLOTGlycosyltransferasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18960PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2699767947197	2	435.269419	868.524284	2.5324	0.0011023	-1.8217	-0.00079294	0.71064	0.00030932	435.268564335478	82.878	0.33965	84.548	84.358	84.697	1.67					19	10	2	0	0	0	0.89051	1	34727	34727		2.3027	0	1	1793500			15651	17064	7267	7301	18426	18426					0.08476330574080748
KNVIVNMEPPP	11	Unmodified	_KNVIVNMEPPP_					0	0	0		PTPN13|p.R2338Qfs*21|1|0.05|ENSG00000163629|chr4:86807826-86807827|-/A|frameshift_variant;nc|ENSG00000163629|Q12923-3|PTPN13;ENSG00000163629|ENST00000411767|PTPN13;nc|ENSG00000163629|Q12923-4|PTPN13	PTPN13|p.R2338Qfs*21|1|0.05|ENSG00000163629|chr4:86807826-86807827|-/A|frameshift_variant	PTPN13|p.R2338Qfs*21|1|0.05|ENSG00000163629|chr4:86807826-86807827|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	310.2228576540947	4	310.170687	1236.65364	1.9279	0.00059799	-0.1548	-4.8015E-05	1.7731	0.00054998	310.42014506758244	89.327	0.32129	89.551	89.39	89.712	0.22359					12	9	2	0	0	0	0.14606	1	37426	37426		0.45452	0	1	103700			15652	3705	7268	7302	18427	18427					0.04478299351217174
KNVKKLLRLIE	11	Unmodified	_KNVKKLLRLIE_					0	0	0			REV__tr|A0A553SR16|A0A553SR16_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_00145PE=3SV=1	REV__tr|A0A553SR16|A0A553SR16_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_00145PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	339.4599487185478	4	339.228965	1352.88676	-1.4496	-0.00049173	-2.1297	-0.00072247	-3.5793	-0.0012142	339.2279050037774	44.627	0.68049	44.627	44.068	44.748	0					31	21	2	0	0	0	0.14606	1	18469	18469		0.45452	0.35968	1	1067000	+		15653	15143	7269	7303	18428	18428					0.2244272413317958
KNVKPRLQEKA	11	Unmodified	_KNVKPRLQEKA_					0	0	0			REV__tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	REV__tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.1581603884697	4	328.453031	1309.78302	-1.9746	-0.00064857	0.063138	2.0738E-05	-1.9115	-0.00062783	328.4529923462019	41.342	0.2268	41.342	41.209	41.435	0					11	6	2	0	0	0	0.14606	1	17281	17281		0.073264	0	1	579820	+		15654	14743	7270	7304	18429	18429					0.14051817025506352
KNVLLLRYPL	10	Unmodified	_KNVLLLRYPL_					0	0	0		ENST00000318522.9_1_2:42557683-42557836:+|nuORF	ENST00000318522.9_1_2:42557683-42557836:+|nuORF	ENST00000318522.9_1_2:42557683-42557836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2667114138603	3	410.264053	1227.77033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.424	1	60.844	60.344	61.344	1.4196								0	0	0	0.66222	1	24919	24919		0.69767	0.24315	1				15655	5836	7271	7305	18430	18430					0.16555405633266673
KNVLSNRPV	9	Unmodified	_KNVLSNRPV_					0	0	0		nc|ENSG00000107404|O14640-2|DVL1;ENSG00000107404|ENST00000378888|DVL1	nc|ENSG00000107404|O14640-2|DVL1	nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8746215701103	3	342.873336	1025.59818	0.27437	9.4075E-05	2.1602	0.00074067	2.4346	0.00083475	343.20821092539586	36.844	0.30199	38.661	38.596	38.898	1.8176					38	17	3	0	0	0	0.79362	1	15452	15452		2.086	0.60411	1	4015000			15656	1600	7272	7306	18431	18431					0.08640253945759468
KNVLVVAVMH	10	Unmodified	_KNVLVVAVMH_					0	0	0		ZFYVE9|p.C361Rfs*31|1|0.03|ENSG00000157077|chr1:52238497-52238498|-/AGGCA|frameshift_variant;nc|ENSG00000157077|O95405-3|ZFYVE9;ENST00000361625.5_1_1:52698878-52729552:+|nuORF;nc|ENSG00000157077|O95405-2|ZFYVE9;ENSG00000157077|ENST00000287727|ZFYVE9	ZFYVE9|p.C361Rfs*31|1|0.03|ENSG00000157077|chr1:52238497-52238498|-/AGGCA|frameshift_variant	ZFYVE9|p.C361Rfs*31|1|0.03|ENSG00000157077|chr1:52238497-52238498|-/AGGCA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1016113162041	3	370.554838	1108.64269	1.5801	0.00058552	-3.6678	-0.0013591	-2.0877	-0.00077362	370.88615424002916	47.195	0.3992	47.525	47.297	47.696	0.33034					16	12	2	0	0	0	0.1256	1	19824	19824		0.69767	0.69767	1	713010			15657	3463	7273	7307	18432	18432					0.09270941767590557
KNVPGKMK	8	Unmodified	_KNVPGKMK_					0	0	0		ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5;ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|7|intron;ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron	ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.2699157595634	2	451.26803	900.521507	2.4547	0.0011077	0.56557	0.00025522	3.0202	0.0013629	451.2694426518775	63.625	0.32903	63.954	63.756	64.085	0.32899					17	10	2	0	0	0	0.88896	1	26655	26655		4.756	2.1785	1	2042300			15658	4399	7274	7308	18433	18433					0.06726739124928827
KNVPGKMK	8	Unmodified	_KNVPGKMK_					0	0	0		ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron;ENST00000585133.1_1_17:29162236-29196669:+|nuORF;nc|ENSG00000176208|Q96QE3-2|ATAD5;ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|7|intron;ENSG00000176208|ENST00000321990|ATAD5	ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron	ENSG00000176208.9,ATAD5,chr17,+,I17.1,30878097,30879422|79|5.02|6|intron	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	451.26803	900.521507	1.9162	0.00086473	3.9764	0.0017944	5.8927	0.0026592	451.2698613247651	63.801	0.30352	63.801	63.587	63.89	0	-0.076491	0.00075437	NaN	4.756	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1196000			15659	4399	7274	7308							0.06726739124928827
KNVPKIKHRKK	11	Unmodified	_KNVPKIKHRKK_					0	0	0		ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-2|ARID4B;ARID4B|p.P1212Qfs*38|1|0.04|ENSG00000054267|chr1:235175203-235175213|GTAAACTTTGG/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.0554382205009	4	344.730669	1374.89357	-1.3295	-0.00045831	-0.86666	-0.00029877	-2.1961	-0.00075708	344.98114616348425	42.602	1.0213	42.602	41.918	42.939	0					105	32	4	0	0	0	0.14606	1	17622	17622		0.40827	0.31342	1	13395000			15660	79	7275	7309	18434	18434					0.22112081804380068
KNVPKIKHRKK	11	Unmodified	_KNVPKIKHRKK_					0	0	0		ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-2|ARID4B;ARID4B|p.P1212Qfs*38|1|0.04|ENSG00000054267|chr1:235175203-235175213|GTAAACTTTGG/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	344.1707641482353	4	344.730669	1374.89357	1.887	0.00065052	-3.4472	-0.0011884	-1.5602	-0.00053785	344.7298147193414	68.032	0.15265	69.902	69.858	70.01	1.87					5	4	2	0	0	0	0.14606	1	28557	28557		0.40827	0.32491	1	120470			15661	79	7275	7309	18435	18435					0.22112081804380068
KNVPKIKHRKK	11	Unmodified	_KNVPKIKHRKK_					0	0	0		ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-2|ARID4B;ARID4B|p.P1212Qfs*38|1|0.04|ENSG00000054267|chr1:235175203-235175213|GTAAACTTTGG/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	344.730669	1374.89357	0.82833	0.00028555	-4.0508	-0.0013964	-3.2224	-0.0011109	344.9798455806826	70.006	0.24954	70.328	70.224	70.474	0.32224	0.16191	-0.00066917	NaN	0.40827	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	319120			15662	79	7275	7309							0.22112081804380068
KNVPKIKHRKK	11	Unmodified	_KNVPKIKHRKK_					0	0	0		ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-2|ARID4B;ARID4B|p.P1212Qfs*38|1|0.04|ENSG00000054267|chr1:235175203-235175213|GTAAACTTTGG/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;nc|ENSG00000054267|Q4LE39-4|ARID4B	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	344.730669	1374.89357	0.78405	0.00027028	-2.7545	-0.00094956	-1.9704	-0.00067927	344.980714683983	68.903	0.1629	70.268	70.154	70.317	1.3657	0.10228	0.0011183	NaN	0.40827	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124060			15663	79	7275	7309							0.22112081804380068
KNVPKQFL	8	Unmodified	_KNVPKQFL_					0	0	0		ENSG00000179841|ENST00000394718|AKAP5	ENSG00000179841|ENST00000394718|AKAP5	ENSG00000179841|ENST00000394718|AKAP5	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2919189333916	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.952	1	85.59	85.09	86.09	1.6379								0	0	0	1.0178	1	35210	35210		1.4819	0	1				15664	4527	7276	7310	18436	18436					0.08826654548136048
KNVRLYDRF	9	Unmodified	_KNVRLYDRF_					0	0	0			REV__tr|A0A553SH40|A0A553SH40_NIACIGrpBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_12050PE=4SV=1	REV__tr|A0A553SH40|A0A553SH40_NIACIGrpBfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_12050PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	303.1989318728447	4	303.422737	1209.66184	-0.50078	-0.00015195	-2.9085	-0.00088251	-3.4093	-0.0010345	303.4220831127103	30.809	0.092831	32.091	32.028	32.121	1.2825					4	2	2	0	0	0	0.11901	1	12918	12918		2.7352	0.64919	1	114130	+		15665	14777	7277	7311	18437	18437					0.0653961438283659
KNVRQDPLKLL	11	Unmodified	_KNVRQDPLKLL_					0	0	0		tr|A0A553SSU7|A0A553SSU7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03560PE=3SV=1	tr|A0A553SSU7|A0A553SSU7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03560PE=3SV=1	tr|A0A553SSU7|A0A553SSU7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03560PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7068359255791	4	331.708131	1322.80342	-1.7198	-0.00057047	-1.5916	-0.00052793	-3.3114	-0.0010984	331.7075433804945	44.888	0.87029	44.888	44.38	45.25	0					52	27	2	0	0	0	1.0224	1	18802	18802		2.4348	0.18206	1	4015700			15666	16627	7278	7312	18438	18438					0.15492987685320259
KNVSKPLLD	9	Unmodified	_KNVSKPLLD_					0	0	0			REV__tr|A0A553SKJ2|A0A553SKJ2_NIACIRibosomebiogenesisGTPaseYqeHOS=NialliacirculansOX=1397GN=yqeHPE=4SV=1	REV__tr|A0A553SKJ2|A0A553SKJ2_NIACIRibosomebiogenesisGTPaseYqeHOS=NialliacirculansOX=1397GN=yqeHPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.9706603884697	3	338.537842	1012.5917	-1.902	-0.0006439	2.4436	0.00082724	0.54158	0.00018335	338.5388691653881	33.762	0.46171	33.762	33.515	33.977	0					17	14	2	0	0	0	0.11851	1	14225	14225		2.2828	0	1	295940	+		15667	14955	7279	7313	18439	18439					0.08590315994376851
KNVTVKTIK	9	Unmodified	_KNVTVKTIK_					0	0	0		ENST00000319092.5_1_1:117075690-117076050:-|nuORF;ENST00000528363.5_1_11:2975753-2985939:-|nuORF;ENSG00000205531|ENST00000380542|NAP1L4;nc|ENSG00000205531|Q99733-2|NAP1L4;NAP1L4-CFTR|1|fusion	ENST00000319092.5_1_1:117075690-117076050:-|nuORF	ENST00000319092.5_1_1:117075690-117076050:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2280456423759	3	344.225486	1029.65463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.127	1	91.531	91.031	92.031	1.4045								0	0	0	0.42693	1	37965	37965		1.0715	0	1				15668	5185	7280	7314	18440	18440					0.140988817824109
KNVVILSG	8	Unmodified	_KNVVILSG_					0	0	0		tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2626525759697	2	415.260728	828.506903	2.8049	0.0011648	1.3443	0.00055824	4.1493	0.001723	415.2609139413543	86.046	0.54586	86.298	86.068	86.614	0.25227					40	17	3	0	0	0	0.89051	1	35951	35951		2.3027	0	1	2618600			15669	16905	7281	7315	18441	18441					0.08578990248429363
KNVVILSG	8	Unmodified	_KNVVILSG_					0	0	0		tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	tr|A0A7D6VT79|A0A7D6VT79_9CLOTDNAtopologymodulationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16075PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	415.260728	828.506903	1.5279	0.00063448	2.8739	0.0011934	4.4018	0.0018279	415.2618080170901	86.19	0.42467	86.19	85.914	86.339	0	-0.054194	0.0006682	NaN	2.3027	37	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3164700			15670	16905	7281	7315							0.08578990248429363
KNVWYVVE	8	Unmodified	_KNVWYVVE_					0	0	0			REV__tr|A0A7D6VYL8|A0A7D6VYL8_9CLOTtRNA(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferaseOS=ClostridiumintestinaleOX=36845GN=mtaBPE=4SV=1	REV__tr|A0A7D6VYL8|A0A7D6VYL8_9CLOTtRNA(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferaseOS=ClostridiumintestinaleOX=36845GN=mtaBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1877319216728	3	346.18692	1035.53893	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.018	1	83.288	82.788	83.788	0.27029								0	0	0	1.0178	1	34719	34719		1.4819	0.51963	1		+		15671	15562	7282	7316	18442	18442					0.022583579315551106
KNWGDEGE	8	Unmodified	_KNWGDEGE_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2;REV__nc|ENSG00000183054|Q99666-2|RGPD5	REV__ENSG00000153201|ENST00000283195|RANBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	312.1356994509697	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.534	1	60.862	60.362	61.362	0.32809								0	0	0	1.0178	1	25365	25365		0.40072	0	1		+		15672	10447;8547	7283	7317	18443	18443					-0.08653132309700595
KNWGDEGE	8	Unmodified	_KNWGDEGE_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2;REV__nc|ENSG00000183054|Q99666-2|RGPD5	REV__ENSG00000153201|ENST00000283195|RANBP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1357910037041	3	312.134885	933.382825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.18	1	63.598	63.098	64.098	1.4177								0	0	0	1.0178	1	26075	26075		0.40072	0	1		+		15673	10447;8547	7283	7317	18444	18444					-0.08653132309700595
KNWRGHTE	8	Unmodified	_KNWRGHTE_					0	0	0		ENST00000368759.5_1_10:127520133-127522405:+|nuORF	ENST00000368759.5_1_10:127520133-127522405:+|nuORF	ENST00000368759.5_1_10:127520133-127522405:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.1742736697197	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.135	1	77.452	76.952	77.952	0.31653								0	0	0	1.0178	1	32258	32258		0.40072	0	1				15674	6088	7284	7318	18445	18445					-0.012663492992714964
KNWRYIVP	8	Unmodified	_KNWRYIVP_					0	0	0		ENST00000473038.5_1_1:46033610-46035625:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1;ENST00000487654.5_1_1:46034675-46035625:+|nuORF;ENST00000475985.1_1_1:46034769-46035625:+|nuORF	ENST00000473038.5_1_1:46033610-46035625:+|nuORF	ENST00000473038.5_1_1:46033610-46035625:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	359.2391235232353	3	359.206426	1074.59745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.561	1	85.199	84.699	85.699	1.6379								0	0	0	1.0178	1	35049	35049		0.40072	0	1				15675	2009	7285	7319	18446	18446					0.06313459296688961
KNWTLQLK	8	Unmodified	_KNWTLQLK_					0	0	0		nc|ENSG00000162929|Q6NSI8-3|SANBR;nc|ENSG00000162929|Q6NSI8-2|SANBR;ENSG00000162929|ENST00000402291|SANBR	nc|ENSG00000162929|Q6NSI8-3|SANBR	nc|ENSG00000162929|Q6NSI8-3|SANBR	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2063781619072	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.238	1	17.065	16.565	17.565	0.82643								0	0	0	1.0178	1	6751	6751		1.4819	0	1				15676	3654	7286	7320	18447	18447					0.08350039576839663
KNWVKKIIVK	10	Unmodified	_KNWVKKIIVK_					0	0	0			REV__tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	REV__tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	315.1436950564384	4	314.71168	1254.81761	0.95678	0.00030111	-0.1699	-5.3469E-05	0.78688	0.00024764	314.71206084601516	39.773	0.55367	40.085	39.642	40.196	0.31263					22	17	2	0	0	0	0.12561	1	16748	16748		0	0	1	438690	+		15677	15310	7287	7321	18448	18448					0.20039684904259047
KNYPVHIGV	9	Unmodified	_KNYPVHIGV_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8631469607353	3	342.862548	1025.56581	-0.28741	-9.8543E-05	1.2086	0.00041439	0.9212	0.00031585	342.8630164225615	28.738	0.36626	30.021	29.855	30.222	1.2825					25	11	4	0	0	0	0.82114	2	12036	12036;12086		2.4985	0.21571	1	4147200			15678	7935	7288	7322	18449;18450	18449					0.05405466542742943
KNYPVHIGV	9	Unmodified	_KNYPVHIGV_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8627807497978	3	342.862548	1025.56581	0.25622	8.7848E-05	1.0446	0.00035816	1.3009	0.00044601	342.86281037839495	28.148	0.36319	29.924	29.759	30.122	1.7754					24	11	3	0	0	0	0.82114	2	11783	11783;11834		2.4985	0.21571	1	4699500			15679	7935	7288	7322	18451;18452	18451					0.05405466542742943
KNYVLIASV	9	Unmodified	_KNYVLIASV_					0	0	0		tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2018310427666	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.483	1	37.788	37.288	38.288	0.30497								0	0	0	0.42693	1	15765	15765		0.96228	0.50394	1				15680	17091	7289	7323	18453	18453					0.08331217482702868
KNYYKSCKNHL	11	Unmodified	_KNYYKSCKNHL_					0	0	0			REV__tr|A0A7D6ZGV1|A0A7D6ZGV1_9CLOTNucleaseSbcCDsubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_00215PE=3SV=1	REV__tr|A0A7D6ZGV1|A0A7D6ZGV1_9CLOTNucleaseSbcCDsubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_00215PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.2334472537041	4	350.180315	1396.69215	1.3428	0.00047021	-0.1295	-4.5348E-05	1.2133	0.00042486	350.43076830175556	40.759	0.89139	41.076	40.606	41.498	0.31683					41	28	2	0	0	0	0.14606	1	17255	17255		0.45452	0.45452	1	1773500	+		15681	15642	7290	7324	18454	18454					0.009676049857262115
KPAKGVLT	8	Unmodified	_KPAKGVLT_					0	0	0		nc|ENSG00000012504|Q96RI1-4|NR1H4;nc|ENSG00000012504|Q96RI1|NR1H4	nc|ENSG00000012504|Q96RI1-4|NR1H4	nc|ENSG00000012504|Q96RI1-4|NR1H4	MSMS	GG20161007_CRH_Patient100_A02_02	2	407.2637817263603	2	407.263271	812.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.09	103.59	104.59	0.059502								0	0	0	1.0178	1	43796	43796		0.69038	0	1				15682	7815	7291	7325	18455	18455					0.09823294111015457
KPASTRPCA	9	Unmodified	_KPASTRPCA_					0	0	0		ENSG00000154734|ENST00000284984|ADAMTS1	ENSG00000154734|ENST00000284984|ADAMTS1	ENSG00000154734|ENST00000284984|ADAMTS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.4839965701103	1	930.482562	929.475285	2.5676	0.0023891	-1.1499	-0.0010699	1.4177	0.0013192	930.4815630887036	87.102	0.88319	87.102	86.551	87.434	0					113	35	4	0	0	0	0.8432	1	36345	36345		1.4819	0	1	83513000			15683	3395	7292	7326	18456	18456					0.007726742228101102
KPFLHRRRRVR	11	Unmodified	_KPFLHRRRRVR_					0	0	0		KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant;ENSG00000083168|ENST00000265713|KAT6A	KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2484619021416	5	304.996007	1519.94365	-2.3585	-0.00071932	-0.5141	-0.0001568	-2.8726	-0.00087612	304.99588218898964	39.277	0.21728	39.277	39.204	39.421	0					8	6	2	0	0	0	0.14606	1	16444	16444		0	0	1	507340			15684	1037	7293	7327	18457	18457					0.20447629252885235
KPGCGVIMGKR	11	Unmodified	_KPGCGVIMGKR_					0	0	0		ENST00000379463.6_1_16:66860654-66864856:-|nuORF	ENST00000379463.6_1_16:66860654-66864856:-|nuORF	ENST00000379463.6_1_16:66860654-66864856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.3209716677666	2	573.317728	1144.6209	1.7446	0.0010002	3.2272	0.0018502	4.9718	0.0028504	573.319822067828	93.281	0.47546	93.281	93.044	93.52	0					34	14	3	0	0	0	1.0366	1	39008	39008		1.1933	0.50296	1	1431700			15685	6212	7294	7328	18458	18458					0.054378137473577226
KPGDGRKVT	9	Unmodified	_KPGDGRKVT_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;ENSG00000124214|ENST00000371856|STAU1;nc|ENSG00000124214|O95793-2|STAU1;nc|ENSG00000124214|O95793-3|STAU1	TOP2A-STAU1|2|fusion	TOP2A-STAU1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2785827517509	2	479.277441	956.540328	1.9386	0.00092912	1.6044	0.00076897	3.543	0.0016981	479.27748828542326	79.043	0.40237	80.778	80.598	81.001	1.735					27	12	3	0	0	0	0.83753	1	33142	33142		1.8442	0	1	4377100			15686	16031	7295	7329	18459	18459					0.06031992020314192
KPGFIKVVR	9	Unmodified	_KPGFIKVVR_					0	0	0		ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3408080935478	2	522.339844	1042.66514	1.4549	0.00075993	0.1257	6.566E-05	1.5806	0.00082559	522.3397743417383	107.61	0.20982	107.61	107.51	107.72	0					47	10	6	0	0	0	0.85019	1	46139	46139		0.52476	0.52476	1	276770000			15687	1703	7296	7330	18460	18460					0.14550909227500597
KPGFIKVVR	9	Unmodified	_KPGFIKVVR_					0	0	0		ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3407470583916	2	522.339844	1042.66514	2.9216	0.0015261	-0.94105	-0.00049155	1.9805	0.0010345	522.3393026789029	107.58	0.27153	107.63	107.48	107.75	0.052452					59	13	7	0	0	0	0.85019	1	46024	46024		0.52476	0.52476	1	465420000			15688	1703	7296	7330	18461	18461					0.14550909227500597
KPGFIKVVR	9	Unmodified	_KPGFIKVVR_					0	0	0		ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	ENSG00000110328|ENST00000227756|GALNT18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	522.339844	1042.66514	3.1856	0.001664	-2.3723	-0.0012392	0.81326	0.0004248	522.3386305184323	107.55	0.2633	107.71	107.56	107.83	0.15795	0.040243	-0.0010641	NaN	0.52476	56	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2205400000			15689	1703	7296	7330							0.14550909227500597
KPGIKEIAPAL	11	Unmodified	_KPGIKEIAPAL_					0	0	0		tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.5722228884697	3	379.572775	1135.69649	0.37477	0.00014225	-1.4904	-0.00056571	-1.1156	-0.00042345	379.5721766579097	88.385	0.51817	88.385	88.15	88.668	0					50	16	5	0	0	0	1.0156	1	36950	36950		2.8433	0.56051	1	17017000			15690	16795	7297	7331	18462	18462					0.1340743747093711
KPGIKEIAPAL	11	Unmodified	_KPGIKEIAPAL_					0	0	0		tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	tr|A0A7D6VQF1|A0A7D6VQF1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01880PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.5728027224541	3	379.572775	1135.69649	2.5131	0.00095392	-2.9017	-0.0011014	-0.38853	-0.00014747	379.5717506133168	88.258	0.49749	88.493	88.259	88.756	0.23471					50	15	5	0	0	0	1.0156	1	37007	37007		2.8433	0.75728	1	20485000			15691	16795	7297	7331	18463	18463					0.1340743747093711
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.3801147341728	2	588.379166	1174.74378	1.3848	0.00081477	2.8584	0.0016818	4.2431	0.0024966	588.3806044300142	107.48	0.17905	107.48	107.37	107.55	0					24	8	4	0	0	0	1.0395	1	46061	46061		0.30703	0.03801	1	51891000	+		15692	10218	7298	7332	18464	18464					0.1633971674195891
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3806640505791	2	588.379166	1174.74378	2.6416	0.0015543	3.2371	0.0019046	5.8787	0.0034589	588.3810111893868	107.46	0.16605	107.51	107.39	107.56	0.052452					20	7	4	0	0	0	1.0395	1	45949	45949		0.30703	0.03801	1	57359000	+		15693	10218	7298	7332	18465	18465					0.1633971674195891
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3795043826103	2	588.379166	1174.74378	3.2411	0.001907	-3.0298	-0.0017827	0.21132	0.00012434	588.3773518796949	105.92	0.17667	106.09	106	106.17	0.16679					27	8	5	0	0	0	1.0395	1	45211	45211		0.30703	0.30703	1	550860000	+		15694	10218	7298	7332	18466	18466					0.1633971674195891
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3798095583916	2	588.379166	1174.74378	3.2385	0.0019055	-1.6705	-0.00098289	1.568	0.00092257	588.3780239059452	107.43	0.22703	107.59	107.45	107.68	0.15795					36	11	4	0	0	0	1.0395	1	46115	46115		0.30703	0.03801	1	307610000	+		15695	10218	7298	7332	18467	18467					0.1633971674195891
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	588.379166	1174.74378	1.3848	0.00081477	2.8584	0.0016818	4.2431	0.0024966	588.3806044300142	107.48	0.17905	107.48	107.37	107.55	0	-0.015311	-0.00019646	NaN	0.30703	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51891000	+		15696	10218	7298	7332							0.1633971674195891
KPGILPVPKLN	11	Unmodified	_KPGILPVPKLN_					0	0	0			REV__ENSG00000143653|ENST00000366510|SCCPDH	REV__ENSG00000143653|ENST00000366510|SCCPDH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	588.379166	1174.74378	2.6416	0.0015543	3.2371	0.0019046	5.8787	0.0034589	588.3810111893868	107.46	0.16605	107.51	107.39	107.56	0.052452	0.015311	0.00024919	NaN	0.30703	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57359000	+		15697	10218	7298	7332							0.1633971674195891
KPGIRQLSRLD	11	Unmodified	_KPGIRQLSRLD_					0	0	0			REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	REV__ENST00000568312.1_1_16:29815990-29816628:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	642.3851196169853	2	641.883136	1281.75172	2.3142	0.0014855	-2.0607	-0.0013227	0.25357	0.00016276	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	1.037	1	34590	34590		1.0715	0.61312	1	10103000	+		15698	8800	7299	7333	18468	18468					0.12211243991396259
KPGKMFVLR	9	Unmodified	_KPGKMFVLR_					0	0	0		ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3283569216728	2	538.325879	1074.63721	2.518	0.0013555	2.1751	0.0011709	4.6931	0.0025264	538.3270153260037	86.206	0.66693	86.206	85.945	86.612	0					77	21	5	0	0	0	0.85019	2	35848	35848;35947		0.52476	0	1	163540000			15699	4689	7300	7334	18469;18470	18469					0.10287262975771228
KPGKRSRT	8	Unmodified	_KPGKRSRT_					0	0	0		ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2868530154228	2	465.2856	928.556647	2.2304	0.0010378	0.20492	9.5347E-05	2.4354	0.0011331	465.28570167533223	68.436	0.34023	68.758	68.627	68.967	0.32224					17	10	2	0	0	0	0.89051	1	28684	28684		2.3027	0.24298	1	885940			15700	2271	7301	7335	18471	18471					0.08951117977085232
KPGKRVIGPRK	11	Unmodified	_KPGKRVIGPRK_					0	0	0		nc|ENSG00000157741|Q6ZU65-2|UBN2;ENSG00000157741|ENST00000473989|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	nc|ENSG00000157741|Q6ZU65-2|UBN2	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.6060058474541	3	412.606813	1234.79861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.345	1	10.345	9.845	10.845	0								0	0	0	0.63775	1	4265	4265		1.3296	0.25818	1				15701	3479	7302	7336	18472	18472					0.19060148333210236
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3008911013603	2	456.299853	910.585153	1.2953	0.00059107	1.7743	0.00080961	3.0696	0.0014007	456.3005784072085	106.2	0.21117	106.2	106.09	106.31	0					32	10	5	0	0	0	0.83753	1	45238	45238		1.8442	1.1539	1	192620000	+		15702	9689	7303	7337	18473	18473					0.1262842283365444
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3005859255791	2	456.299853	910.585153	3.3618	0.001534	-0.54002	-0.00024641	2.8218	0.0012876	456.2995296323462	106.13	0.50067	106.29	106.19	106.7	0.15781					59	25	5	0	0	0	0.83753	1	45420	45420		1.8442	1.1539	1	1053299999.9999999	+		15703	9689	7303	7337	18474	18474					0.1262842283365444
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	456.3037902712822	2	456.299853	910.585153	3.361	0.0015336	-0.002789	-1.2726E-06	3.3582	0.0015324	456.29957602014906	108.23	0.57864	108.39	108.31	108.89	0.15781					47	31	2	0	0	0	0.11944	1	46708	46708		0.45834	0.45834	1	30977000	+		15704	9689	7303	7337	18475	18475					0.1262842283365444
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	911.5935546755791	1	911.59243	910.585153	3.1135	0.0028382	-1.9189	-0.0017492	1.1946	0.001089	911.5904500042433	107.68	0.23774	107.84	107.72	107.96	0.15795					43	12	5	0	0	0	0.83753	1	46294	46294		1.8442	1.1539	1	2417500000	+		15705	9689	7303	7337	18476	18476					0.1262842283365444
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	456.299853	910.585153	1.2889	0.00058812	0.47991	0.00021898	1.7688	0.0008071	456.3000390895145	108.35	0.1545	108.35	108.28	108.44	0	-0.016367	0.00013749	NaN	0.45834	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6914400	+		15706	9689	7303	7337							0.1262842283365444
KPGLILVAT	9	Unmodified	_KPGLILVAT_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	456.299853	910.585153	1.2953	0.00059107	1.7743	0.00080961	3.0696	0.0014007	456.3005784072085	106.2	0.21117	106.2	106.09	106.31	0	-0.044489	0.0012765	NaN	1.8442	32	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	192620000	+		15707	9689	7303	7337							0.1262842283365444
KPGMRRRII	9	Unmodified	_KPGMRRRII_					0	0	0		ENST00000487931.1_1_1:78444877-78481928:+|nuORF;ENSG00000162616|ENST00000370763|DNAJB4	ENST00000487931.1_1_1:78444877-78481928:+|nuORF	ENST00000487931.1_1_1:78444877-78481928:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	563.3529540896416	2	563.853127	1125.6917	2.1945	0.0012374	-0.36174	-0.00020397	1.8328	0.0010334	563.8531146549287	82.989	0.27656	83.259	83.091	83.368	0.27029					12	8	2	0	0	0	0.11948	1	34703	34703		0.52476	0.12405	1	629090			15708	3632	7304	7338	18477	18477					0.13388274847193316
KPGPLRRAH	9	Unmodified	_KPGPLRRAH_					0	0	0		ENST00000354765.6_1_6:144285946-144286364:-|nuORF	ENST00000354765.6_1_6:144285946-144286364:-|nuORF	ENST00000354765.6_1_6:144285946-144286364:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3160888552666	2	516.314692	1030.61483	2.5624	0.001323	0.19881	0.00010265	2.7612	0.0014257	516.3146843357589	83.761	0.7395	84.031	83.739	84.478	0.27029					78	23	6	0	0	0	0.8523	1	35008	35008		0.52476	0	1	143450000			15709	5977	7305	7339	18478	18478					0.10074799622361752
KPGQRKKTQKG	11	Unmodified	_KPGQRKKTQKG_					0	0	0		nc|ENSG00000196277|Q14831-5|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;ENSG00000196277|ENST00000357716|GRM7;nc|ENSG00000196277|Q14831-2|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3838989138603	2	628.383303	1254.75205	2.0099	0.001263	-0.69703	-0.000438	1.3129	0.00082499	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	1.0366	1	32168	32168		1.1933	0.59184	1	2978200			15710	4930	7306	7340	18479	18479					0.13486663711250912
KPGQRKKTQKG	11	Unmodified	_KPGQRKKTQKG_					0	0	0		nc|ENSG00000196277|Q14831-5|GRM7;nc|ENSG00000196277|Q14831-3|GRM7;nc|ENSG00000196277|Q14831-4|GRM7;ENSG00000196277|ENST00000357716|GRM7;nc|ENSG00000196277|Q14831-2|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	nc|ENSG00000196277|Q14831-5|GRM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3843871951103	2	628.383303	1254.75205	1.2793	0.0008039	-0.45253	-0.00028436	0.82678	0.00051954	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	1.0131	1	32922	32922		2.9952	0.26005	1	6175000			15711	4930	7306	7340	18480	18480					0.13486663711250912
KPGQVGIG	8	Unmodified	_KPGQVGIG_					0	0	0			REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2254211306572	2	378.224146	754.433738	-0.92915	-0.00035143	4.4107	0.0016682	3.4815	0.0013168	378.2255548732655	100.74	0.12	100.74	100.66	100.78	0					5	3	2	0	0	0	0.89008	1	42177	42177		2.5775	0	1	5355100	+		15712	11864	7307	7341	18481	18481					0.04669861525815122
KPGQVGIG	8	Unmodified	_KPGQVGIG_					0	0	0			REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	378.224146	754.433738	-0.92915	-0.00035143	4.4107	0.0016682	3.4815	0.0013168	378.2255548732655	100.74	0.12	100.74	100.66	100.78	0	-0.0081093	0.00058326	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5355100	+		15713	11864	7307	7341							0.04669861525815122
KPGQVGIG	8	Unmodified	_KPGQVGIG_					0	0	0			REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	REV__nc|ENSG00000215018|Q2UY09-2|COL28A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	378.224146	754.433738	2.977	0.001126	4.2143	0.0015939	7.1913	0.0027199	378.2263913259746	100.53	0.12218	100.73	100.65	100.78	0.20527	-0.012728	0.0004347	NaN	2.5775	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	507340	+		15714	11864	7307	7341							0.04669861525815122
KPGRFARR	8	Unmodified	_KPGRFARR_					0	0	0			REV__ENSG00000143157|ENST00000367876|POGK	REV__ENSG00000143157|ENST00000367876|POGK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3014404177666	2	494.301585	986.588616	1.6955	0.00083811	-1.3827	-0.00068345	0.31288	0.00015466	494.3008275028269	81.541	0.659	81.541	81.195	81.854	0					76	21	5	0	0	0	0.89178	2	33922	33922;34013		0.69038	0.28966	1	190100000	+		15715	10195	7308	7342	18482;18483	18482					0.09478530450883227
KPGRFARR	8	Unmodified	_KPGRFARR_					0	0	0			REV__ENSG00000143157|ENST00000367876|POGK	REV__ENSG00000143157|ENST00000367876|POGK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3010436892509	2	494.301585	986.588616	2.7054	0.0013373	-2.1036	-0.0010398	0.60175	0.00029744	494.3004961644446	81.37	1.223	81.661	81.276	82.499	0.29056					97	39	5	0	0	0	0.89178	2	33923	33923;34072		0.69038	0.28966	1	155540000	+		15716	10195	7308	7342	18484;18485	18484					0.09478530450883227
KPGRFARR	8	Unmodified	_KPGRFARR_					0	0	0			REV__ENSG00000143157|ENST00000367876|POGK	REV__ENSG00000143157|ENST00000367876|POGK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3022033572197	2	494.301585	986.588616	2.6068	0.0012885	-1.2766	-0.00063105	1.3301	0.00065749	494.30092697220897	80.494	0.58011	81.745	81.45	82.03	1.2512					68	18	5	0	0	0	0.89178	1	33803	33803		0.69038	0.28966	1	104910000	+		15717	10195	7308	7342	18486	18486					0.09478530450883227
KPGRFARR	8	Unmodified	_KPGRFARR_					0	0	0			REV__ENSG00000143157|ENST00000367876|POGK	REV__ENSG00000143157|ENST00000367876|POGK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3014099001884	2	494.301585	986.588616	1.1906	0.00058849	-1.163	-0.00057487	0.027568	1.3627E-05	494.30095493188617	80.196	1.2804	81.912	81.443	82.724	1.7167					95	41	5	0	0	0	0.89178	1	33579	33579		0.69038	0.28966	1	53493000	+		15718	10195	7308	7342	18487	18487					0.09478530450883227
KPGRHSVRIT	10	Unmodified	_KPGRHSVRIT_					0	0	0		ENST00000585917.5_1_19:28284461-28284521:+|nuORF	ENST00000585917.5_1_19:28284461-28284521:+|nuORF	ENST00000585917.5_1_19:28284461-28284521:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8445312380791	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.89803	1	30948	30948		1.3295	0.80477	1	9020800			15719	7450	7309	7343	18488	18488					0.10422436476960684
KPGRHSVRIT	10	Unmodified	_KPGRHSVRIT_					0	0	0		ENST00000585917.5_1_19:28284461-28284521:+|nuORF	ENST00000585917.5_1_19:28284461-28284521:+|nuORF	ENST00000585917.5_1_19:28284461-28284521:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8437988162041	2	575.843813	1149.67307	1.8258	0.0010514	-0.22419	-0.0001291	1.6016	0.00092228	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.89803	1	30469	30469		1.3295	0.13619	1	2554000			15720	7450	7309	7343	18489	18489					0.10422436476960684
KPGRKLRPISD	11	Unmodified	_KPGRKLRPISD_					0	0	0		nc|ENSG00000151725|Q71F23-3|CENPU;ENSG00000151725|ENST00000281453|CENPU	nc|ENSG00000151725|Q71F23-3|CENPU	nc|ENSG00000151725|Q71F23-3|CENPU	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.9261352419853	3	422.926211	1265.7568	1.2049	0.0005096	-0.48342	-0.00020445	0.72151	0.00030515	422.925867430836	91.652	1.0068	91.652	91.405	92.411	0					54	31	3	0	0	0	1.039	1	38400	38400		0.45452	0.12525	1	657220			15721	3299	7310	7344	18490	18490					0.13455547854027827
KPGRKSKRY	9	Unmodified	_KPGRKSKRY_					0	0	0			REV__ENST00000492302.1_1_1:20966360-20975203:+|nuORF	REV__ENST00000492302.1_1_1:20966360-20975203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3419067263603	2	560.340907	1118.66726	2.0203	0.0011321	0.76588	0.00042915	2.7862	0.0015612	560.3412148168601	88.384	0.55127	88.384	88.15	88.701	0					68	17	5	0	0	0	0.85019	2	36922	36922;37001		0.52476	0.12405	1	53316000	+		15722	10563	7311	7345	18491;18492	18491					0.11267337965318802
KPGRKSKRY	9	Unmodified	_KPGRKSKRY_					0	0	0			REV__ENST00000492302.1_1_1:20966360-20975203:+|nuORF	REV__ENST00000492302.1_1_1:20966360-20975203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3431884646416	2	560.340907	1118.66726	2.53	0.0014177	1.424	0.00079791	3.954	0.0022156	560.3415504621547	88.227	0.5611	88.461	88.228	88.789	0.23471					68	17	5	0	0	0	0.85019	3	36983	36983;37034;37112		0.52476	0.12405	1	57751000	+		15723	10563	7311	7345	18493;18494;18495	18493					0.11267337965318802
KPGRLKRAKR	10	Unmodified	_KPGRLKRAKR_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.4058715701103	2	605.404373	1208.79419	3.2614	0.0019745	-0.13304	-8.0544E-05	3.1284	0.0018939	605.4042045326453	107.42	0.24777	107.57	107.43	107.68	0.15795					30	12	3	0	0	0	0.89803	1	46172	46172		0.40072	0	1	457570000	+		15724	11338	7312	7346	18496	18496					0.19814683910294661
KPGRRWPRKA	10	Unmodified	_KPGRRWPRKA_					0	0	0			REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	626.3819457888603	2	626.380897	1250.74724	2.1075	0.0013201	-1.6918	-0.0010597	0.41566	0.00026036	626.3796844979985	94.392	0.49126	94.392	94.149	94.641	0					51	15	5	0	0	0	0.89803	2	39402	39402;39448		0.40072	0.40072	1	10764000	+		15725	10880	7313	7347	18497;18498	18497					0.13189824359142222
KPGRRWPRKA	10	Unmodified	_KPGRRWPRKA_					0	0	0			REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9233886599541	3	417.923024	1250.74724	2.9413	0.0012292	-1.4031	-0.00058639	1.5382	0.00064284	417.92220993239306	94.227	0.53398	94.372	94.133	94.667	0.14493					60	16	5	0	0	0	0.89803	1	39451	39451		0.13989	0.017027	1	23177000	+		15726	10880	7313	7347	18499	18499					0.13189824359142222
KPGRRWPRKA	10	Unmodified	_KPGRRWPRKA_					0	0	0			REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.3820678591728	2	626.380897	1250.74724	3.9086	0.0024482	-2.2613	-0.0014164	1.6472	0.0010318	626.3793604711419	93.624	0.47889	94.496	94.226	94.705	0.87176					41	14	4	0	0	0	0.89803	1	39407	39407		0.40072	0	1	4449300	+		15727	10880	7313	7347	18500	18500					0.13189824359142222
KPGRRWPRKA	10	Unmodified	_KPGRRWPRKA_					0	0	0			REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	REV__nc|ENSG00000167791|Q9NPB3-2|CABP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9236938357353	3	417.923024	1250.74724	3.2346	0.0013518	-1.4629	-0.00061137	1.7718	0.00074046	417.9221265278933	93.288	0.53644	94.565	94.26	94.797	1.277					55	16	5	0	0	0	0.89803	1	39280	39280		0.69767	0.24315	1	12902000	+		15728	10880	7313	7347	18501	18501					0.13189824359142222
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2475463747978	2	393.247621	784.480688	0.1397	5.4938E-05	-0.46845	-0.00018422	-0.32874	-0.00012928	393.24805614654787	75.216	0.44238	75.216	75.059	75.502	0					28	13	3	0	0	0	0.89051	1	31311	31311		2.3027	0	1	1743000	+		15729	15713	7314	7348	18502	18502					0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2472411990166	2	393.247621	784.480688	2.5815	0.0010152	-3.4925	-0.0013734	-0.91105	-0.00035827	393.2470364200612	75.032	0.71974	75.356	74.864	75.584	0.32464					48	22	3	0	0	0	0.89051	1	31383	31383		2.3027	0	1	3120200	+		15730	15713	7314	7348	18503	18503					0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.2485229372978	2	393.247621	784.480688	2.7081	0.0010649	-1.4703	-0.00057818	1.2378	0.00048675	393.2473763382109	73.724	0.46217	75.52	75.286	75.748	1.7962					22	14	2	0	0	0	0.89051	1	30910	30910		2.3027	0	1	1495700	+		15731	15713	7314	7348	18504	18504					0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	393.247621	784.480688	0.1397	5.4938E-05	-0.46845	-0.00018422	-0.32874	-0.00012928	393.24805614654787	75.216	0.44238	75.216	75.059	75.502	0	-0.1707	0.00062016	NaN	2.3027	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1743000	+		15732	15713	7314	7348							0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	393.247621	784.480688	2.5815	0.0010152	-3.4925	-0.0013734	-0.91105	-0.00035827	393.2470364200612	75.032	0.71974	75.356	74.864	75.584	0.32464	-0.030404	-0.0017582	NaN	2.3027	48	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3120200	+		15733	15713	7314	7348							0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	393.247621	784.480688	2.875	0.0011306	-0.66076	-0.00025984	2.2142	0.00087074	393.2475322137103	74.137	0.43655	75.455	75.154	75.591	1.318	0.067733	0.00046891	NaN	2.3027	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1940700	+		15734	15713	7314	7348							0.0798272107693947
KPGVGKLS	8	Unmodified	_KPGVGKLS_					0	0	0			REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	REV__tr|A0A7D6ZT85|A0A7D6ZT85_9CLOTATP-dependentDNAhelicaseRecGOS=ClostridiumintestinaleOX=36845GN=recGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	393.247621	784.480688	2.7081	0.0010649	-1.4703	-0.00057818	1.2378	0.00048675	393.2473763382109	73.724	0.46217	75.52	75.286	75.748	1.7962	0.13338	-0.00016777	NaN	2.3027	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1495700	+		15735	15713	7314	7348							0.0798272107693947
KPGVPPKPLKA	11	Unmodified	_KPGVPPKPLKA_					0	0	0			REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	REV__ENST00000596242.5_1_19:4325153-4327208:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3691284060478	2	566.366059	1130.71756	3.2067	0.0018161	-1.8017	-0.0010204	1.405	0.00079575	566.3650484975075	107.48	0.22772	107.63	107.51	107.73	0.15781					53	11	7	0	0	0	1.0366	1	46197	46197		1.1933	0.84271	1	931010000	+		15736	11238	7315	7349	18505	18505					0.15743447570457647
KPHLYERWLYR	11	Unmodified	_KPHLYERWLYR_					0	0	0			REV__ENSG00000137252|ENST00000370862|HCRTR2	REV__ENSG00000137252|ENST00000370862|HCRTR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	780.9257079958916	2	780.925335	1559.83612	1.7081	0.0013339	-3.9316	-0.0030703	-2.2235	-0.0017364	780.9222115057627	51.335	0.49731	51.662	51.384	51.882	0.32716					36	15	3	0	0	0	1.0366	1	21509	21509		1.1933	0	1	1029600	+		15737	10015	7316	7350	18506	18506					0.07859194808156644
KPHLYERWLYR	11	Unmodified	_KPHLYERWLYR_					0	0	0			REV__ENSG00000137252|ENST00000370862|HCRTR2	REV__ENSG00000137252|ENST00000370862|HCRTR2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	780.925335	1559.83612	2.0627	0.0016108	-4.9201	-0.0038423	-2.8574	-0.0022314	781.4240080186772	51.681	0.31747	51.681	51.6	51.917	0	0.0094896	-0.00097076	NaN	1.1933	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536510	+		15738	10015	7316	7350							0.07859194808156644
KPHLYERWLYR	11	Unmodified	_KPHLYERWLYR_					0	0	0			REV__ENSG00000137252|ENST00000370862|HCRTR2	REV__ENSG00000137252|ENST00000370862|HCRTR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	780.925335	1559.83612	1.7081	0.0013339	-3.9316	-0.0030703	-2.2235	-0.0017364	780.9222115057627	51.335	0.49731	51.662	51.384	51.882	0.32716	-0.0094896	0.00057322	NaN	1.1933	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029600	+		15739	10015	7316	7350							0.07859194808156644
KPIFVPAKAR	10	Unmodified	_KPIFVPAKAR_					0	0	0		CON__ENSEMBL:ENSBTAP00000031360	CON__ENSEMBL:ENSBTAP00000031360	CON__ENSEMBL:ENSBTAP00000031360	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2405273318291	3	376.241359	1125.70225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.209	1	37.027	36.527	37.527	1.8176								0	0	0	0.66052	1	14764	14764		1.7423	0.54893	1			+	15740	330	7317	7351	18507	18507					0.14442580773243208
KPIFVPAKAR	10	Unmodified	_KPIFVPAKAR_					0	0	0		CON__ENSEMBL:ENSBTAP00000031360	CON__ENSEMBL:ENSBTAP00000031360	CON__ENSEMBL:ENSBTAP00000031360	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2404662966728	3	376.241359	1125.70225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.079	1	38.899	38.399	39.399	1.8202								0	0	0	0.66166	1	15558	15558		0.69767	0	1			+	15741	330	7317	7351	18508	18508					0.14442580773243208
KPKALVAP	8	Unmodified	_KPKALVAP_					0	0	0			REV__nc|ENSG00000176842|P78411-3|IRX5	REV__nc|ENSG00000176842|P78411-3|IRX5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2735168337822	2	412.273638	822.532724	0.2395	9.8741E-05	-2.7803	-0.0011462	-2.5408	-0.0010475	412.27230947665583	33.437	0.92465	33.437	33.296	34.221	0					51	29	2	0	0	0	0.89176	1	14005	14005		0.79363	0	1	1897700	+		15742	11194	7318	7352	18509	18509					0.1143588449069739
KPKILNHILKL	11	Unmodified	_KPKILNHILKL_					0	0	0			REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	329.9751464724541	4	329.974871	1315.87038	-0.12874	-4.2481E-05	3.1013	0.0010233	2.9725	0.00098086	330.22631668983837	27.23	0.47873	28.502	28.264	28.743	1.2715					35	15	3	0	0	0	1.039	1	11386	11386		0.45452	0.046251	1	1109300	+		15743	15495	7319	7353	18510	18510					0.2250764296707075
KPKILNHILKL	11	Unmodified	_KPKILNHILKL_					0	0	0			REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	329.974871	1315.87038	-0.12874	-4.2481E-05	3.1013	0.0010233	2.9725	0.00098086	330.22631668983837	27.23	0.47873	28.502	28.264	28.743	1.2715	-0.030964	-0.00018316	NaN	0.45452	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1109300	+		15744	15495	7319	7353							0.2250764296707075
KPKLLKPQRKV	11	Unmodified	_KPKLLKPQRKV_					0	0	0		ENSG00000165633|ENST00000332853|VSTM4	ENSG00000165633|ENST00000332853|VSTM4	ENSG00000165633|ENST00000332853|VSTM4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	334.0346252322197	4	334.48032	1333.89217	-2.119	-0.00070876	-2.894	-0.00096797	-5.013	-0.0016767	334.7300478116171	31.971	1.4974	31.971	31.503	33.001	0					90	47	3	0	0	0	0.14606	1	13220	13220		0.08335	0.08335	1	1256000			15745	3849	7320	7354	18511	18511					0.23858447715633702
KPKLLPLLML	10	Unmodified	_KPKLLPLLML_					0	0	0		ENST00000473989.7_2_7:138968337-138968418:+|nuORF	ENST00000473989.7_2_7:138968337-138968418:+|nuORF	ENST00000473989.7_2_7:138968337-138968418:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3934203982353	2	583.390688	1164.76682	3.0996	0.0018083	0.63267	0.00036909	3.7323	0.0021774	583.3910828794753	107.48	0.22772	107.63	107.51	107.73	0.15781					45	11	5	0	0	0	0.89803	1	46191	46191		0.45834	0.057624	1	1213200000			15746	6768	7321	7355	18512	18512					0.19103019535054955
KPKMHIKS	8	Unmodified	_KPKMHIKS_					0	0	0			REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|34|2|sense	REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|34|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	484.7434265017509	2	484.78913	967.563706	0.54675	0.00026506	0.096766	4.6911E-05	0.64351	0.00031197	484.7890999199088	25.294	0.33666	27.011	26.847	27.183	1.7167					24	10	3	0	0	0	2.3239	1	10513	10513		2.0598	2.0598	1	1980500	+		15747	14339	7322	7356	18513	18513					0.07862714533303006
KPKRGRRPKKK	11	Unmodified	_KPKRGRRPKKK_					0	0	0			REV__ENSG00000141956|ENST00000398548|PRDM15	REV__ENSG00000141956|ENST00000398548|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.4857360720634	4	345.486203	1377.9157	-1.9305	-0.00066697	-0.35285	-0.0001219	-2.2834	-0.00078887	345.48610094393746	27.335	1.0273	27.335	26.716	27.744	0					71	33	3	0	0	0	1.0402	2	11306	11306;11359		0.08335	0	1	31445000	+		15748	10168	7323	7357	18514;18515	18514					0.2418630627280436
KPKRGRRPKKK	11	Unmodified	_KPKRGRRPKKK_					0	0	0			REV__ENSG00000141956|ENST00000398548|PRDM15	REV__ENSG00000141956|ENST00000398548|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.4852477908134	4	345.486203	1377.9157	0.070832	2.4471E-05	-2.2268	-0.00076934	-2.156	-0.00074486	345.48532879527187	25.321	0.69754	26.581	26.227	26.925	1.2594					58	22	3	0	0	0	1.0402	1	10630	10630		0.08335	0	1	2072900	+		15749	10168	7323	7357	18516	18516					0.2418630627280436
KPKRGRRPKKK	11	Unmodified	_KPKRGRRPKKK_					0	0	0			REV__ENSG00000141956|ENST00000398548|PRDM15	REV__ENSG00000141956|ENST00000398548|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4853698611259	4	345.486203	1377.9157	0.1075	3.714E-05	-2.3909	-0.00082603	-2.2834	-0.00078889	345.48522838844815	23.995	1.2413	25.679	25.118	26.359	1.6845					114	41	4	0	0	0	1.0402	1	9897	9897		0.08335	0	1	3726900	+		15750	10168	7323	7357	18517	18517					0.2418630627280436
KPKRGRRPKKK	11	Unmodified	_KPKRGRRPKKK_					0	0	0			REV__ENSG00000141956|ENST00000398548|PRDM15	REV__ENSG00000141956|ENST00000398548|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4850646853447	4	345.486203	1377.9157	0.14379	4.9676E-05	-2.5881	-0.00089414	-2.4443	-0.00084446	345.7362658095653	25.057	0.60576	26.774	26.391	26.997	1.7167					50	19	3	0	0	0	1.0402	1	10410	10410		0.08335	0	1	2494100	+		15751	10168	7323	7357	18518	18518					0.2418630627280436
KPLNGRRRRK	10	Unmodified	_KPLNGRRRRK_					0	0	0			REV__nc|ENSG00000177426|Q15583-4|TGIF1	REV__nc|ENSG00000177426|Q15583-4|TGIF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.2071716189384	4	320.958815	1279.80615	-0.16499	-5.2954E-05	-0.33181	-0.0001065	-0.4968	-0.00015945	320.9593032285547	52.178	0.2566	53.574	53.395	53.652	1.3966					11	7	2	0	0	0	0.12561	1	21814	21814		0.15932	0	1	788100	+		15752	11217	7324	7358	18519	18519					0.17744300653475875
KPNRGLEIK	9	Unmodified	_KPNRGLEIK_					0	0	0			REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|43|2|sense	REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|43|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.7834350466728	2	527.822015	1053.62948	0.55779	0.00029442	-0.082337	-4.3459E-05	0.47546	0.00025096	528.3226206884632	32.916	0.22683	34.195	34.001	34.227	1.2782					10	7	2	0	0	0	0.11518	1	13769	13769		11.64	4.3511	1	362530	+		15753	14263	7325	7359	18520	18520					0.10480826979824087
KPQISPKSN	9	Unmodified	_KPQISPKSN_					0	0	0			REV__ENSG00000118217|ENST00000367942|ATF6	REV__ENSG00000118217|ENST00000367942|ATF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	499.7855102419853	2	499.785099	997.555644	2.9988	0.0014987	-1.0837	-0.00054162	1.9151	0.00095712	499.7844083093502	83.752	0.39479	84.022	83.832	84.227	0.27029					23	12	2	0	0	0	0.71526	1	35027	35027		6.7232	0.99131	1	1226900	+		15754	9515	7326	7360	18521	18521					0.05676858817514585
KPRAKRQAA	9	Unmodified	_KPRAKRQAA_					0	0	0		tr|A0A553SJN6|A0A553SJN6_NIACIGeneralstressprotein13OS=NialliacirculansOX=1397GN=yugIPE=4SV=1	tr|A0A553SJN6|A0A553SJN6_NIACIGeneralstressprotein13OS=NialliacirculansOX=1397GN=yugIPE=4SV=1	tr|A0A553SJN6|A0A553SJN6_NIACIGeneralstressprotein13OS=NialliacirculansOX=1397GN=yugIPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.8628112673759	3	342.549075	1024.6254	-1.9209	-0.00065799	-2.4375	-0.00083496	-4.3583	-0.0014929	342.54804240058917	29.868	0.73671	29.868	29.302	30.039	0					59	23	4	0	0	0	0.11909	1	12496	12496		2.4985	1.722	1	3267300			15755	16253	7327	7361	18522	18522					0.11406782276776539
KPRKIFQWRQL	11	Unmodified	_KPRKIFQWRQL_					0	0	0		ENST00000342409.3_1_10:13735712-14050160:-|nuORF;FRMD4A|p.S640Mfs*67|1|0.04|ENSG00000151474|chr10:13659470-13659471|-/A|frameshift_variant;ENSG00000151474|ENST00000357447|FRMD4A	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	750.4511596560478	2	750.45152	1498.88849	2.294	0.0017215	-1.596	-0.0011977	0.69794	0.00052377	750.4504229401667	85.686	1.3907	86.812	86.329	87.719	1.1265					226	56	5	0	0	0	1.0084	2	36353	36353;36415		3.2813	1.7994	1	133840000			15756	3290	7328	7362	18523;18524	18523					0.15899777941785942
KPRKIFQWRQL	11	Unmodified	_KPRKIFQWRQL_					0	0	0		ENST00000342409.3_1_10:13735712-14050160:-|nuORF;FRMD4A|p.S640Mfs*67|1|0.04|ENSG00000151474|chr10:13659470-13659471|-/A|frameshift_variant;ENSG00000151474|ENST00000357447|FRMD4A	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	750.4517089724541	2	750.45152	1498.88849	3.2316	0.0024252	-2.6767	-0.0020087	0.5549	0.00041643	750.4494206945195	85.976	0.3418	87.523	87.348	87.69	1.547					26	13	2	0	0	0	1.0084	1	36153	36153		3.2813	1.7994	1	123140000			15757	3290	7328	7362	18525	18525					0.15899777941785942
KPRKIFQWRQL	11	Unmodified	_KPRKIFQWRQL_					0	0	0		ENST00000342409.3_1_10:13735712-14050160:-|nuORF;FRMD4A|p.S640Mfs*67|1|0.04|ENSG00000151474|chr10:13659470-13659471|-/A|frameshift_variant;ENSG00000151474|ENST00000357447|FRMD4A	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	750.45152	1498.88849	2.7744	0.002082	-2.6489	-0.0019879	0.12548	9.4169E-05	750.4495450643624	87.049	0.82157	87.049	86.612	87.434	0	0.1105	-0.00065888	NaN	3.2813	138	33	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	111640000			15758	3290	7328	7362							0.15899777941785942
KPRKIFQWRQL	11	Unmodified	_KPRKIFQWRQL_					0	0	0		ENST00000342409.3_1_10:13735712-14050160:-|nuORF;FRMD4A|p.S640Mfs*67|1|0.04|ENSG00000151474|chr10:13659470-13659471|-/A|frameshift_variant;ENSG00000151474|ENST00000357447|FRMD4A	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	ENST00000342409.3_1_10:13735712-14050160:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	750.45152	1498.88849	2.56	0.0019211	-2.26	-0.001696	0.29996	0.00022511	750.4497983435394	86.868	0.80328	87.112	86.638	87.441	0.24387	0.1736	-7.5188E-05	NaN	3.2813	145	32	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	109100000			15759	3290	7328	7362							0.15899777941785942
KPRMRKQSW	9	Unmodified	_KPRMRKQSW_					0	0	0			REV__ENST00000588797.5_1_19:44335486-44351150:+|nuORF	REV__ENST00000588797.5_1_19:44335486-44351150:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8428832888603	2	608.840217	1215.66588	4.136	0.0025182	2	0.0012177	6.1361	0.0037359	608.840774281536	94.191	0.30966	94.932	94.764	95.074	0.74124					20	9	3	0	0	0	0.71526	1	39626	39626		6.7232	3.1267	1	1157600	+		15760	14047	7329	7363	18526	18526					0.0666738060492662
KPRQTYLI	8	Unmodified	_KPRQTYLI_					0	0	0		ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	ENST00000465952.5_1_13:31205167-31205455:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8049499392509	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.435	1	64.764	64.264	65.264	0.32899								0	0	0	1.0178	1	26991	26991		2.3027	0.24298	1				15761	6700	7330	7364	18527	18527					0.08902039576844345
KPRRIQRIIPK	11	Unmodified	_KPRRIQRIIPK_					0	0	0			REV__nc|ENSG00000006607|O94887-3|FARP2	REV__nc|ENSG00000006607|O94887-3|FARP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9722167849541	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.974	1	48.974	48.474	49.474	0								0	0	0	0.63775	1	20448	20448		5.2969	0	1		+		15762	8509	7331	7365	18528	18528					0.23431770695719933
KPRRIQRIIPK	11	Unmodified	_KPRRIQRIIPK_					0	0	0			REV__nc|ENSG00000006607|O94887-3|FARP2	REV__nc|ENSG00000006607|O94887-3|FARP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719116091728	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.599	1	49.599	49.099	50.099	0								0	0	0	0.63775	1	20703	20703		5.2969	0	1		+		15763	8509	7331	7365	18529	18529					0.23431770695719933
KPRRWRRPWDP	11	Unmodified	_KPRRWRRPWDP_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2919799685478	3	517.291887	1548.85383	1.9397	0.0010034	1.3262	0.00068603	3.2659	0.0016894	517.292279860137	42.867	4.0798	43.187	42.758	46.838	0.32058					373	135	5	0	0	0	1.0365	1	18029	18029		1.2148	0	1	20394000			15764	5717	7332	7366	18530	18530					0.10135954853694784
KPRVLAPRL	9	Unmodified	_KPRVLAPRL_					0	0	0		ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.5715820193291	3	350.569588	1048.68693	0.22159	7.7682E-05	4.2563	0.0014921	4.4779	0.0015698	350.5709661421853	26.26	0.45731	28.007	27.7	28.158	1.747					16	14	2	0	0	0	0.847	1	10962	10962		0.96228	0.69326	1	895100			15765	7519	7333	7367	18531	18531					0.16453713976079598
KPRVLAPRL	9	Unmodified	_KPRVLAPRL_					0	0	0		ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	350.569588	1048.68693	0.65296	0.00022891	4.4482	0.0015594	5.1011	0.0017883	350.9055821573306	27.956	0.35954	28.227	28.036	28.396	0.27119	0.11371	-0.00049242	NaN	0.96228	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	737800			15766	7519	7333	7367							0.16453713976079598
KPRVLAPRL	9	Unmodified	_KPRVLAPRL_					0	0	0		ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	ENST00000596232.1_1_19:36036641-36037015:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	350.569588	1048.68693	-0.083284	-2.9197E-05	5.8383	0.0020467	5.755	0.0020175	350.9062889709406	26.835	0.39662	28.106	27.778	28.174	1.2715	-0.0074304	0.00096954	NaN	0.96228	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1364700			15767	7519	7333	7367							0.16453713976079598
KPRYRRLILKT	11	Unmodified	_KPRYRRLILKT_					0	0	0		nc|ENSG00000249087|Q8NC38|ZNF436-AS1;ENST00000335648.3_1_1:23695790-23696168:+|nuORF	nc|ENSG00000249087|Q8NC38|ZNF436-AS1	nc|ENSG00000249087|Q8NC38|ZNF436-AS1	MSMS	GG20161007_CRH_Patient100_A02_02	2	722.4684326052666	2	722.46717	1442.91979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.68	1	107.73	107.23	108.23	0.052452								0	0	0	0.63775	1	46117	46117		0.26902	0	1				15768	5911	7334	7368	18532	18532					0.21604350975871967
KPTHSAKRVSK	11	Unmodified	_KPTHSAKRVSK_					0	0	0			REV__nc|ENSG00000171490|O76021-2|RSL1D1	REV__nc|ENSG00000171490|O76021-2|RSL1D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8708373904228	2	619.870028	1237.7255	1.6732	0.0010372	-0.23431	-0.00014524	1.4389	0.00089193	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	1.0254	2	33240	33152;33240		2.4985	1.169	1	8897800	+		15769	11028	7335	7369	18533;18534	18534					0.11614974819917734
KPTKTKVK	8	Unmodified	_KPTKTKVK_					0	0	0			REV__nc|ENSG00000188895|Q68DK7-3|MSL1	REV__nc|ENSG00000188895|Q68DK7-3|MSL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.3126098513603	2	465.310752	928.606951	3.5439	0.001649	0.36315	0.00016898	3.907	0.001818	465.3107584799024	109.16	0.357	109.31	109.13	109.49	0.1548					37	16	3	0	0	0	0.89051	1	47276	47276		2.3027	0	1	51929000	+		15770	11591	7336	7370	18535	18535					0.1397922758222876
KPTLQPVLQL	10	Unmodified	_KPTLQPVLQL_					0	0	0		ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	ENSG00000272333|ENST00000420124|KMT2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5733215212822	3	379.572775	1135.69649	4.3991	0.0016698	-3.1123	-0.0011813	1.2868	0.00048843	379.5715094816345	87.254	0.52708	88.749	88.456	88.983	1.4953					30	16	2	0	0	0	0.88508	1	36804	36804		3.0723	0.22898	1	7926700			15771	5449	7337	7371	18536	18536					0.1340743747093711
KPTNTFDAH	9	Unmodified	_KPTNTFDAH_					0	0	0		tr|A0A7D6VT40|A0A7D6VT40_9CLOTDsbAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11695PE=4SV=1;tr|A0A553SIY7|A0A553SIY7_NIACIDsbAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_15785PE=4SV=1	tr|A0A7D6VT40|A0A7D6VT40_9CLOTDsbAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11695PE=4SV=1	tr|A0A7D6VT40|A0A7D6VT40_9CLOTDsbAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11695PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.1710998415947	3	344.169929	1029.48796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.075	1	66.4	65.9	66.9	0.32449								0	0	0	0.42693	1	27663	27663		0.96228	0.56156	1				15772	16224	7338	7372	18537	18537					-0.025605911132970505
KPTRPNSLP	9	Unmodified	_KPTRPNSLP_					0	0	0		ENSG00000145819|ENST00000645722|ARHGAP26;nc|ENSG00000145819|Q9UNA1|ARHGAP26	ENSG00000145819|ENST00000645722|ARHGAP26	ENSG00000145819|ENST00000645722|ARHGAP26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2927734255791	2	505.293091	1008.57163	1.0593	0.00053526	-2.3117	-0.0011681	-1.2524	-0.00063284	505.2918588948279	80.232	0.44868	81.948	81.663	82.111	1.7167					35	14	3	0	0	0	0.77526	1	33588	33588		4.3292	0.73274	1	3645900			15773	3125	7339	7373	18538	18538					0.06768565054414921
KPTRSLKRPEA	11	Unmodified	_KPTRSLKRPEA_					0	0	0			REV__nc|ENSG00000173253|Q9Y5R5-2|DMRT2	REV__nc|ENSG00000173253|Q9Y5R5-2|DMRT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8846313357353	2	641.883136	1281.75172	2.1395	0.0013733	-0.58879	-0.00037793	1.5508	0.00099541	641.882756461577	80.074	0.93571	80.074	79.856	80.791	0					67	29	3	0	0	0	1.037	1	33320	33320		1.0715	0.10919	1	1307900	+		15774	11091	7340	7374	18539	18539					0.12211243991396259
KPTTKKKKKKI	11	Unmodified	_KPTTKKKKKKI_					0	0	0		ENST00000354416.7_1_X:118751886-118752201:-|nuORF	ENST00000354416.7_1_X:118751886-118752201:-|nuORF	ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4625121951103	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.28	1	108.28	107.78	108.78	0								0	0	0	0.63775	1	46622	46622		0.26902	0	1				15775	5976	7341	7375	18540	18540					0.25711314512841454
KPTTKKKKKKI	11	Unmodified	_KPTTKKKKKKI_					0	0	0		ENST00000354416.7_1_X:118751886-118752201:-|nuORF	ENST00000354416.7_1_X:118751886-118752201:-|nuORF	ENST00000354416.7_1_X:118751886-118752201:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4653808474541	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.37	1	107.53	107.03	108.03	0.15795								0	0	0	0.63775	1	46117	46117		0.26902	0.26902	1				15776	5976	7341	7375	18541	18541					0.25711314512841454
KPTVAKLLPWF	11	Unmodified	_KPTVAKLLPWF_					0	0	0			REV__ENST00000578036.5_1_17:62801160-62825332:-|nuORF	REV__ENST00000578036.5_1_17:62801160-62825332:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	650.3951293826103	2	650.394816	1298.77508	2.3072	0.0015006	0.18766	0.00012205	2.4948	0.0016226	650.3947838765138	81.483	2.4977	81.483	80.791	83.289	0					178	81	4	0	0	0	1.0366	1	33938	33938		1.1933	0	1	9280600	+		15777	12867	7342	7376	18542	18542					0.1376428977600881
KPTVAKLLPWF	11	Unmodified	_KPTVAKLLPWF_					0	0	0			REV__ENST00000578036.5_1_17:62801160-62825332:-|nuORF	REV__ENST00000578036.5_1_17:62801160-62825332:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3967773318291	2	650.394816	1298.77508	1.9699	0.0012812	0.76533	0.00049777	2.7352	0.001779	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0366	1	34079	34079		1.1933	0	1	10064000	+		15778	12867	7342	7376	18543	18543					0.1376428977600881
KPTYRELLLLK	11	Unmodified	_KPTYRELLLLK_					0	0	0		tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.6243774294853	3	458.622017	1372.84422	1.6649	0.00076354	2.8029	0.0012855	4.4678	0.002049	458.6232150370628	96.737	0.19794	96.737	96.602	96.8	0					19	6	4	0	0	0	1.0366	1	40416	40416		0.40827	0	1	44086000			15779	16571	7343	7377	18544	18544					0.17271329004938707
KPTYRELLLLK	11	Unmodified	_KPTYRELLLLK_					0	0	0		tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	458.6245910525322	3	458.622017	1372.84422	3.3409	0.0015322	2.5363	0.0011632	5.8772	0.0026954	458.62309155861226	96.665	0.24335	96.77	96.635	96.878	0.105					25	7	5	0	0	0	1.0366	1	40441	40441		0.40827	0	1	48909000			15780	16571	7343	7377	18545	18545					0.17271329004938707
KPTYRELLLLK	11	Unmodified	_KPTYRELLLLK_					0	0	0		tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	tr|A0A553SRN7|A0A553SRN7_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01275PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	458.622017	1372.84422	3.3409	0.0015322	2.5363	0.0011632	5.8772	0.0026954	458.62309155861226	96.665	0.24335	96.77	96.635	96.878	0.105	0.029074	-0.00019478	NaN	0.40827	25	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48909000			15781	16571	7343	7377							0.17271329004938707
KPTYSLYFL	9	Unmodified	_KPTYSLYFL_					0	0	0		ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	ENSG00000171811|ENST00000368586|CFAP46	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1131.609423816204	1	1131.60847	1130.6012	2.7783	0.0031439	-2.0115	-0.0022762	0.76678	0.00086769	1131.6055055150193	101.08	0.20432	101.26	101.13	101.34	0.18048					20	6	4	0	0	0	0.63129	1	42511	42511		10.074	3.8681	1	103500000			15782	4208	7344	7378	18546	18546					0.04112084279904593
KPVKNFLQ	8	Unmodified	_KPVKNFLQ_					0	0	0		tr|A0A553SLA4|A0A553SLA4_NIACIHsp20/alphacrystallinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20260PE=3SV=1	tr|A0A553SLA4|A0A553SLA4_NIACIHsp20/alphacrystallinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20260PE=3SV=1	tr|A0A553SLA4|A0A553SLA4_NIACIHsp20/alphacrystallinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_20260PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2923461794853	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.481	1	84.151	83.651	84.651	1.67								0	0	0	1.0178	1	34600	34600		0.40072	0	1				15783	16326	7345	7379	18547	18547					0.08826654548136048
KQALKYFNL	9	Unmodified	_KQALKYFNL_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	375.5535461306572	3	375.553603	1123.63898	-0.66636	-0.00025026	0.41099	0.00015435	-0.25538	-9.5908E-05	375.5539230604117	36.506	0.51955	37.783	37.561	38.081	1.2762					63	25	3	0	0	0	0.099302	4	15315	15272;15315;15361;15399		49.554	38.06	1	12164000			15784	869	7346	7380	18548;18549;18550;18551	18549					0.08210595265359188
KQALKYFNL	9	Unmodified	_KQALKYFNL_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8275634646416	2	562.826766	1123.63898	0.25914	0.00014585	1.2996	0.00073144	1.5587	0.00087729	562.8273506154669	36.53	0.42576	37.806	37.594	38.02	1.2762					51	21	3	0	0	0	1.944E-05	4	15327	15278;15327;15373;15415		166.45	103.88	1	7535200			15785	869	7346	7380	18552;18553;18554;18555	18553					0.08210595265359188
KQALKYFNL	9	Unmodified	_KQALKYFNL_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5534850955009	3	375.553603	1123.63898	0.48542	0.0001823	-1.1154	-0.0004189	-0.63001	-0.0002366	375.5532564904258	35.863	0.50283	37.68	37.473	37.976	1.8176					66	30	3	0	0	0	0.099302	3	15028	14988;15028;15078		49.554	29.928	1	10342000			15786	869	7346	7380	18556;18557;18558	18557					0.08210595265359188
KQALKYFNL	9	Unmodified	_KQALKYFNL_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8279907107353	2	562.826766	1123.63898	0.78173	0.00043998	0.22442	0.00012631	1.0062	0.00056629	562.8267257444397	35.912	0.43819	37.729	37.473	37.911	1.8176					58	27	3	0	0	0	1.944E-05	3	15041	15002;15041;15087		197.17	140.99	1	10103000			15787	869	7346	7380	18559;18560;18561	18560					0.08210595265359188
KQAYICADA	9	Unmodified	_KQAYICADA_					0	0	0			REV__ENST00000204566.6_1_15:65262476-65266954:-|nuORF	REV__ENST00000204566.6_1_15:65262476-65266954:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1608459353447	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.979	1	20.172	19.672	20.672	0.19342								0	0	0	0.42693	1	8301	8301		0.26902	0	1		+		15788	12052	7347	7381	18562	18562					-0.03250451733947557
KQFPEVIKY	9	Unmodified	_KQFPEVIKY_					0	0	0		nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3289062380791	2	576.326599	1150.63865	0.72704	0.00041901	1.6171	0.000932	2.3442	0.001351	576.3279354476465	30.323	0.55624	31.606	31.317	31.873	1.2825					53	17	4	0	0	0	0.036104	3	12718	12669;12718;12771		79.596	39.647	1	2559100			15789	944	7348	7382	18563;18564;18565	18564					0.06935175545504535
KQFPEVIKY	9	Unmodified	_KQFPEVIKY_					0	0	0		nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1536132693291	3	384.553492	1150.63865	0.081081	3.118E-05	1.0571	0.00040653	1.1382	0.00043771	384.55398462946465	30.358	0.58709	31.64	31.378	31.965	1.2825					47	18	4	0	0	0	0.11909	1	12676	12676		2.4985	1.3051	1	4007200			15790	944	7348	7382	18566	18566					0.06935175545504535
KQFPEVIKY	9	Unmodified	_KQFPEVIKY_					0	0	0		nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3274413943291	2	576.326599	1150.63865	0.81192	0.00046793	1.1953	0.00068886	2.0072	0.0011568	576.3277041287338	29.84	0.45951	31.652	31.429	31.889	1.8117					40	14	3	0	0	0	0.0037498	3	12503	12455;12503;12556		125.53	71.696	1	3900200			15791	944	7348	7382	18567;18568;18569	18568					0.06935175545504535
KQFPEVIKY	9	Unmodified	_KQFPEVIKY_					0	0	0		nc|ENSG00000076108|Q9UIF9-2|BAZ2A;nc|ENSG00000076108|Q9UIF9-3|BAZ2A;ENSG00000076108|ENST00000549884|BAZ2A;nc|ENSG00000076108|Q9UIF9|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	nc|ENSG00000076108|Q9UIF9-2|BAZ2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1530944705009	3	384.553492	1150.63865	0.57345	0.00022052	0.043142	1.659E-05	0.61659	0.00023711	384.5534722516996	29.858	0.4919	31.673	31.462	31.954	1.8151					29	15	2	0	0	0	0.11909	1	12487	12487		2.4985	1.427	1	2968900			15792	944	7348	7382	18570	18570					0.06935175545504535
KQFQQLQK	8	Unmodified	_KQFQQLQK_					0	0	0			REV__ENSG00000171855|ENST00000380232|IFNB1	REV__ENSG00000171855|ENST00000380232|IFNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3004028201103	2	524.300916	1046.58728	2.3598	0.0012372	-2.1403	-0.0011221	0.21951	0.00011509	524.3005122807083	61.248	0.22047	61.248	61.172	61.393	0					12	6	3	0	0	0	0.87276	1	25574	25574		13.508	0.97634	1	1574400	+		15793	11047	7349	7383	18571	18571					0.06584851571460604
KQFRCPLC	8	Unmodified	_KQFRCPLC_					0	0	0		ENSG00000119138|ENST00000377126|KLF9	ENSG00000119138|ENST00000377126|KLF9	ENSG00000119138|ENST00000377126|KLF9	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1706420779228	3	332.170219	993.488827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.13	1	47.505	47.005	48.005	1.3751								0	0	0	1.0178	1	19321	19321		0.45834	0	1				15794	2059	7350	7384	18572	18572					-0.008177912695941814
KQGLVLPS	8	Unmodified	_KQGLVLPS_					0	0	0			REV__ENSG00000152784|ENST00000415738|PRDM8	REV__ENSG00000152784|ENST00000415738|PRDM8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.2601806521416	2	421.260728	840.506903	0.82429	0.00034724	-2.3064	-0.00097161	-1.4822	-0.00062437	421.2597240719134	65.913	0.44716	65.913	65.676	66.123	0					37	13	4	0	0	0	0.88055	1	27405	27405		8.5933	0	1	12368000	+		15795	10434	7351	7385	18573	18573					0.08026990248424681
KQGLVLPS	8	Unmodified	_KQGLVLPS_					0	0	0			REV__ENSG00000152784|ENST00000415738|PRDM8	REV__ENSG00000152784|ENST00000415738|PRDM8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	421.260728	840.506903	2.2115	0.00093162	-3.3188	-0.0013981	-1.1073	-0.00046644	421.2592930108457	65.679	0.53436	66.006	65.74	66.274	0.32689	-0.066461	-0.00023855	NaN	8.5933	44	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17531000	+		15796	10434	7351	7385							0.08026990248424681
KQGLVLPS	8	Unmodified	_KQGLVLPS_					0	0	0			REV__ENSG00000152784|ENST00000415738|PRDM8	REV__ENSG00000152784|ENST00000415738|PRDM8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	421.260728	840.506903	3.0486	0.0012843	-3.6871	-0.0015532	-0.63848	-0.00026897	421.25911642524557	64.716	0.5234	66.124	65.801	66.324	1.4071	0.050765	-0.00054889	NaN	8.5933	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7593800	+		15797	10434	7351	7385							0.08026990248424681
KQHHKKRT	8	Unmodified	_KQHHKKRT_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|181|3|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|181|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.8179199099541	2	531.817599	1061.62064	1.6087	0.00085555	-1.341	-0.00071317	0.26771	0.00014237	531.8167339583721	70.021	2.3367	70.021	69.109	71.446	0					195	74	4	0	0	0	0.89178	1	29129	29129		0.69038	0	1	4456900	+		15798	14319	7352	7386	18574	18574					0.09229898134049108
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.4954406619072	4	391.494825	1561.95019	0.11538	4.5172E-05	1.0164	0.00039792	1.1318	0.00044309	391.4956720521357	45.266	1.2964	45.266	44.964	46.261	0					187	40	7	0	0	0	1.0402	2	19085	19085;19124		0.094841	0.011491	1	203700000	+		15799	12106	7353	7387	18575;18576	18575					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	313.5316955447197	5	313.397315	1561.95019	-2.0508	-0.00064272	1.9461	0.00060992	-0.10467	-3.2805E-05	313.59864058156603	46.9	0.96441	46.9	46.566	47.53	0					48	30	2	0	0	0	0.14606	1	19679	19679		0.094841	0.094841	1	742050	+		15800	12106	7353	7387	18577	18577					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.4954101443291	4	391.494825	1561.95019	1.7891	0.00070042	-0.46411	-0.00018169	1.325	0.00051873	391.4947586822703	44.141	1.7302	44.467	43.963	45.693	0.32664					236	57	5	0	0	0	1.0402	5	18381	18381;18559;18649;18700;18748		0.094841	0.094841	1	141910000	+		15801	12106	7353	7387	18578;18579;18580;18581;18582	18578					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	313.6977722048759	5	313.397315	1561.95019	1.0815	0.00033895	1.2582	0.00039431	2.3397	0.00073326	313.3983934872146	44.153	2.7	44.48	43.806	46.506	0.32674					399	89	6	0	0	0	0.14606	1	19132	19132		0.094841	0.094841	1	261040000	+		15802	12106	7353	7387	18583	18583					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	391.4955322146416	4	391.494825	1561.95019	1.0974	0.00042962	-0.13275	-5.197E-05	0.96464	0.00037765	391.4949225338448	42.908	2.0131	44.248	43.667	45.68	1.3399					250	64	5	0	0	0	1.0402	6	17806	17806;17934;18051;18090;18181;18236		0.094841	0.094841	1	133070000	+		15803	12106	7353	7387	18584;18585;18586;18587;18588;18589	18584					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	313.6975890994072	5	313.397315	1561.95019	0.43761	0.00013714	1.2387	0.0003882	1.6763	0.00052535	313.39848060151667	42.909	2.5215	44.249	43.602	46.124	1.3399					375	80	7	0	0	0	0.14606	1	18694	18694		0.094841	0.094841	1	301600000	+		15804	12106	7353	7387	18590	18590					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.7462036013603	4	391.494825	1561.95019	1.5226	0.00059611	-1.0822	-0.00042366	0.44047	0.00017244	391.49452146757574	42.232	1.7709	44.153	43.633	45.404	1.9211					232	57	5	0	0	0	1.0402	5	17531	17531;17568;17763;17841;17919		0.094841	0.094841	1	154800000	+		15805	12106	7353	7387	18591;18592;18593;18594;18595	18591					0.1916952241360832
KQHRRKRRREL	11	Unmodified	_KQHRRKRRREL_					0	0	0			REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	REV__ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	313.6978637576103	5	313.397315	1561.95019	1.0379	0.00032528	-0.14076	-4.4114E-05	0.89714	0.00028116	313.3980116165934	42.256	2.8017	44.177	43.353	46.155	1.9211					353	90	7	0	0	0	0.14606	1	18328	18328		0.094841	0	1	317260000	+		15806	12106	7353	7387	18596	18596					0.1916952241360832
KQIFEERKRRI	11	Unmodified	_KQIFEERKRRI_					0	0	0			REV__nc|ENSG00000182934|P08240-2|SRPRA	REV__nc|ENSG00000182934|P08240-2|SRPRA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	502.3400451540947	3	501.63532	1501.88413	4.2342	0.002124	-0.41191	-0.00020663	3.8223	0.0019174	501.6348387059662	90.827	0.7664	91.808	91.398	92.165	0.98157					38	23	2	0	0	0	0.14606	1	38245	38245		0.094841	0	1	556820	+		15807	11370	7354	7388	18597	18597					0.15326268728199466
KQIGAVAVGI	10	Unmodified	_KQIGAVAVGI_					0	0	0		tr|A0A553SGS9|A0A553SGS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=dcuSPE=4SV=1	tr|A0A553SGS9|A0A553SGS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=dcuSPE=4SV=1	tr|A0A553SGS9|A0A553SGS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=dcuSPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3018371462822	2	478.300384	954.586216	2.9381	0.0014053	-0.10915	-5.2205E-05	2.829	0.0013531	478.30038547718146	60.283	0.39598	61.702	61.507	61.903	1.4196					26	12	3	0	0	0	0.41677	1	25266	25266		32.305	0	1	4066500			15808	16120	7355	7389	18598	18598					0.10710637202555517
KQIIPVKEIP	10	Unmodified	_KQIIPVKEIP_					0	0	0			REV__tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	REV__tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.9172241091728	3	388.916541	1163.72779	4.5989	0.0017886	-2.8627	-0.0011134	1.7361	0.00067522	388.9150768390343	87.993	0.76696	89.05	88.859	89.626	1.0562					35	23	2	0	0	0	0.89803	1	37123	37123		1.5923	0.13716	1	1570300	+		15809	15786	7356	7390	18599	18599					0.15248010505047205
KQIIPVKEIP	10	Unmodified	_KQIIPVKEIP_					0	0	0			REV__tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	REV__tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	388.916541	1163.72779	4.5989	0.0017886	-2.8627	-0.0011134	1.7361	0.00067522	388.9150768390343	87.993	0.76696	89.05	88.859	89.626	1.0562	-0.11738	-0.00027136	NaN	1.5923	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1570300	+		15810	15786	7356	7390							0.15248010505047205
KQIYDSNHSK	10	Unmodified	_KQIYDSNHSK_					0	0	0			REV__tr|A0A7D6ZXZ4|A0A7D6ZXZ4_9CLOTSegregationandcondensationproteinBOS=ClostridiumintestinaleOX=36845GN=scpBPE=3SV=1	REV__tr|A0A7D6ZXZ4|A0A7D6ZXZ4_9CLOTSegregationandcondensationproteinBOS=ClostridiumintestinaleOX=36845GN=scpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	407.2068969607353	3	407.207043	1218.5993	-0.88867	-0.00036187	1.3245	0.00053934	0.43581	0.00017747	407.2074098859667	11.328	0.83251	11.328	10.802	11.635	0					39	26	2	0	0	0	0.86348	1	4694	4694		5.4027	0.35519	1	1869100	+		15811	15772	7357	7391	18600	18600					-0.0012557647601170174
KQIYDSNHSK	10	Unmodified	_KQIYDSNHSK_					0	0	0			REV__tr|A0A7D6ZXZ4|A0A7D6ZXZ4_9CLOTSegregationandcondensationproteinBOS=ClostridiumintestinaleOX=36845GN=scpBPE=3SV=1	REV__tr|A0A7D6ZXZ4|A0A7D6ZXZ4_9CLOTSegregationandcondensationproteinBOS=ClostridiumintestinaleOX=36845GN=scpBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	407.207043	1218.5993	0.28851	0.00011748	-0.20618	-8.3958E-05	0.082327	3.3524E-05	407.541231116789	11.619	0.18579	11.704	11.615	11.801	0.085134	0.18819	-0.0013039	NaN	5.4027	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250670	+		15812	15772	7357	7391							-0.0012557647601170174
KQKDWVKVF	9	Unmodified	_KQKDWVKVF_					0	0	0			REV__tr|A0A7D6VR17|A0A7D6VR17_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=celBPE=4SV=1	REV__tr|A0A7D6VR17|A0A7D6VR17_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=celBPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	393.2502319216728	3	393.229119	1176.66553	0.35961	0.00014141	2.5986	0.0010218	2.9582	0.0011632	393.2294137506669	91.832	0.75817	91.832	91.5	92.258	0					35	23	3	0	0	0	0.11944	1	38280	38280		0.20686	0	1	1178300	+		15813	15400	7358	7392	18601	18601					0.0842628415668969
KQKISKEEFD	10	Unmodified	_KQKISKEEFD_					0	0	0		ENSG00000152382|ENST00000367874|TADA1	ENSG00000152382|ENST00000367874|TADA1	ENSG00000152382|ENST00000367874|TADA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.8908569216728	3	417.890832	1250.65067	0.744	0.00031091	-2.824	-0.0011801	-2.08	-0.0008692	417.8907882564201	28.977	0.60062	30.776	30.419	31.02	1.7987					45	19	4	0	0	0	0.8974	1	12173	12173		1.7423	0.14999	1	2929600			15814	3324	7359	7393	18602	18602					0.035367474980375846
KQKKLIEIHLL	11	Unmodified	_KQKKLIEIHLL_					0	0	0		tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	454.9677917361259	3	454.965895	1361.87586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.917	1	26.175	25.675	26.675	1.2579								0	0	0	0.63775	1	10429	10429		0.50596	0.38309	1				15815	16884	7360	7394	18603	18603					0.20939321758896767
KQKKLIEIHLL	11	Unmodified	_KQKKLIEIHLL_					0	0	0		tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4770385622978	4	341.47624	1361.87586	0.18013	6.151E-05	2.1466	0.000733	2.3267	0.00079451	341.4769216109376	26.328	1.837	28.075	27.553	29.39	1.747					180	60	4	0	0	0	1.0369	2	11134	11134;11180		1.1098	0	1	24626000			15816	16884	7360	7394	18604;18605	18604					0.20939321758896767
KQKKLIEIHLL	11	Unmodified	_KQKKLIEIHLL_					0	0	0		tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	tr|A0A7D6VST2|A0A7D6VST2_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14065PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	454.9670898318291	3	454.965895	1361.87586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.557	1	26.242	25.742	26.742	1.6845								0	0	0	0.63775	1	10259	10259		0.40827	0	1				15817	16884	7360	7394	18606	18606					0.20939321758896767
KQKKRRYQKKE	11	Unmodified	_KQKKRRYQKKE_					0	0	0		ENST00000282964.5_1_21:21112145-21112373:+|nuORF	ENST00000282964.5_1_21:21112145-21112373:+|nuORF	ENST00000282964.5_1_21:21112145-21112373:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3110534548759	3	507.310836	1518.91068	2.9254	0.0014841	-0.7448	-0.00037785	2.1806	0.0011062	507.3107247037459	90.653	1.2725	90.862	90.081	91.354	0.20904					90	39	3	0	0	0	1.0405	2	37769	37769;38027		0	0	1	1379600			15818	5706	7361	7395	18607;18608	18607					0.17197957619509907
KQKRRRRKHR	10	Unmodified	_KQKRRRRKHR_					0	0	0			REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9862548708916	4	362.986901	1447.9185	-1.0768	-0.00039088	-0.48776	-0.00017705	-1.5646	-0.00056793	362.9867618023066	36.01	0.74994	36.01	35.462	36.212	0					283	63	5	0	0	0	0.89803	1	14924	14924		0.13989	0.056541	1	455320000	+		15819	10618	7362	7396	18609	18609					0.21245574450313143
KQKRRRRKHR	10	Unmodified	_KQKRRRRKHR_					0	0	0			REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9858886599541	4	362.986901	1447.9185	-0.66717	-0.00024217	-1.5151	-0.00054996	-2.1823	-0.00079214	362.98638335306435	33.626	0.3055	34.901	34.819	35.125	1.2746					115	32	5	0	0	0	0.89803	1	14142	14142		0.13989	0.04505	1	279370000	+		15820	10618	7362	7396	18610	18610					0.21245574450313143
KQLHAGSLV	9	Unmodified	_KQLHAGSLV_					0	0	0		ENSG00000116688|ENST00000235329|MFN2	ENSG00000116688|ENST00000235329|MFN2	ENSG00000116688|ENST00000235329|MFN2	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1909667849541	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.312	1	23.489	22.989	23.989	1.177								0	0	0	0.42693	1	9325	9325		1.1933	0	1				15821	1979	7363	7397	18611	18611					0.07245180025722675
KQLKKVLKKIV	11	Unmodified	_KQLKKVLKKIV_					0	0	0		ENSG00000055044|ENST00000264279|NOP58;ENST00000478941.1_1_2:203147084-203155055:+|nuORF;ENST00000472050.5_1_2:203130664-203149064:+|nuORF;ENST00000488403.5_1_2:203130664-203149205:+|nuORF	ENSG00000055044|ENST00000264279|NOP58	ENSG00000055044|ENST00000264279|NOP58	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.3192932009697	3	442.318269	1323.93298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.39	1	107.45	106.95	107.95	0.052452								0	0	0	0.63775	1	45927	45927		0.094841	0.094841	1				15822	718	7364	7398	18612	18612					0.2839678903526419
KQMEQISQFL	10	Unmodified	_KQMEQISQFL_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2;ENSG00000144834|ENST00000478951|TAGLN3	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3243896365166	2	626.323731	1250.63291	1.3901	0.00087067	-0.31565	-0.0001977	1.0745	0.00067297	626.323735427681	48.732	0.2464	50.709	50.546	50.792	1.9772					13	7	2	0	0	0	0.65659	1	20398	20398		20.415	1.1575	1	676920			15823	3507	7365	7399	18613	18613					0.017617089715486145
KQMEQISQFL	10	Unmodified	_KQMEQISQFL_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2;ENSG00000144834|ENST00000478951|TAGLN3	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	626.323731	1250.63291	1.4731	0.00092265	0.22556	0.00014128	1.6987	0.0010639	626.3247019226079	49.23	0.25065	50.621	50.453	50.704	1.3911	-0.044012	0.0005229	NaN	20.415	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	677220			15824	3507	7365	7399							0.017617089715486145
KQNKGNAR	8	Unmodified	_KQNKGNAR_					0	0	0			REV__tr|A0A553SP60|A0A553SP60_NIACIRqc2homologRqcHOS=NialliacirculansOX=1397GN=rqcHPE=3SV=1	REV__tr|A0A553SP60|A0A553SP60_NIACIRqc2homologRqcHOS=NialliacirculansOX=1397GN=rqcHPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	305.1003906130791	3	305.842147	914.504612	1.0354	0.00031666	1.0246	0.00031336	2.06	0.00063002	305.8424508920057	49.888	0.34024	50.219	50.049	50.39	0.33019					12	10	2	0	0	0	2.3239	1	20962	20962		0.35063	0	1	421610	+		15825	15073	7366	7400	18614	18614					0.043939545633293164
KQPEDYFYL	9	Unmodified	_KQPEDYFYL_					0	0	0		MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.7922851443291	2	601.790047	1201.56554	0.72636	0.00043712	2.8893	0.0017388	3.6157	0.0021759	601.7917455134636	53.05	0.44874	54.451	54.216	54.665	1.4005					24	13	3	0	0	0	0.098163	2	22203	22203;22257		49.933	15.831	1	1172100			15826	1207	7367	7401	18615;18616	18615					-0.02717997967761221
KQPEDYFYL	9	Unmodified	_KQPEDYFYL_					0	0	0		MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.7914306521416	2	601.790047	1201.56554	1.1947	0.00071898	1.8504	0.0011136	3.0452	0.0018326	601.7914486833354	52.474	0.41659	54.447	54.257	54.674	1.9722					21	12	2	0	0	0	0.12251	2	22041	21990;22041		41.84	11.253	1	1033700			15827	1207	7367	7401	18617;18618	18618					-0.02717997967761221
KQQLLYLLT	9	Unmodified	_KQQLLYLLT_					0	0	0			REV__ENST00000520874.1_1_8:108995475-108995910:+|nuORF	REV__ENST00000520874.1_1_8:108995475-108995910:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3423950076103	2	560.342249	1118.66995	2.0203	0.0011321	-1.6303	-0.00091352	0.39003	0.00021855	560.3412148168601	88.384	0.55127	88.384	88.15	88.701	0					68	17	5	0	0	0	0.85019	1	36961	36961		0.52476	0.066424	1	53316000	+		15828	10350	7368	7402	18619	18619					0.11535748579603933
KQRHVRKKRK	10	Unmodified	_KQRHVRKKRK_					0	0	0		ENST00000533834.1_1_1:104080032-104087738:+|nuORF;nc|ENSG00000185946|Q96LT9-2|RNPC3;ENSG00000185946|ENST00000423855|RNPC3	ENST00000533834.1_1_1:104080032-104087738:+|nuORF	ENST00000533834.1_1_1:104080032-104087738:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.7289001345634	4	341.72719	1362.87965	-0.12003	-4.1018E-05	2.6097	0.00089181	2.4897	0.00085079	341.7281007894483	27.094	1.5514	28.366	27.747	29.298	1.2715					91	50	3	0	0	0	0.89803	1	11500	11500		0.62683	0.21856	1	10337000			15829	4773	7369	7403	18620	18620					0.2127284909595346
KQRIELLRA	9	Unmodified	_KQRIELLRA_					0	0	0		nc|ENSG00000291035|Q9NSQ0|RRP7BP;ENST00000357802.6_1_22:42970741-42976277:-|nuORF;ENSG00000189306|ENST00000323013|RRP7A	nc|ENSG00000291035|Q9NSQ0|RRP7BP	nc|ENSG00000291035|Q9NSQ0|RRP7BP	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2396728396416	3	376.240018	1125.69823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.232	1	36.507	36.007	37.007	1.2746								0	0	0	0.42693	1	14790	14790		0.96228	0.26461	1				15830	4903	7370	7404	18621	18621					0.14040491279547496
KQRIKEWNRVL	11	Unmodified	_KQRIKEWNRVL_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.6290466189384	3	490.628165	1468.86267	1.272	0.00062407	-0.81344	-0.00039909	0.45855	0.00022498	490.62782722772664	97.492	0.27689	97.492	97.353	97.63	0					11	8	2	0	0	0	1.0402	1	40769	40769		0.094841	0	1	1361800	+		15831	9474	7371	7405	18622	18622					0.14698883699497856
KQRIKEWNRVL	11	Unmodified	_KQRIKEWNRVL_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	490.628165	1468.86267	3.4266	0.0016812	0.12076	5.9246E-05	3.5474	0.0017404	490.9627126944984	97.388	0.12789	97.479	97.399	97.527	0.090881	-0.0062327	0.0010242	NaN	0.094841	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	889740	+		15832	9474	7371	7405							0.14698883699497856
KQRKQKVLL	9	Unmodified	_KQRKQKVLL_					0	0	0		tr|A0A553SIV8|A0A553SIV8_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15630PE=3SV=1	tr|A0A553SIV8|A0A553SIV8_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15630PE=3SV=1	tr|A0A553SIV8|A0A553SIV8_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15630PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	380.2307006716728	3	380.92403	1139.75026	2.0214	0.00077	1.1405	0.00043443	3.1619	0.0012044	381.25848867272225	70.075	0.5728	71.913	71.687	72.26	1.8378					22	17	2	0	0	0	0.11819	1	29415	29415		2.7352	0.89096	1	627600			15833	16221	7372	7406	18623	18623					0.1859765469332615
KQRRRRPQV	9	Unmodified	_KQRRRRPQV_					0	0	0			REV__ENSG00000186895|ENST00000334134|FGF3	REV__ENSG00000186895|ENST00000334134|FGF3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	307.1157104372978	4	306.694353	1222.7483	-2.7301	-0.00083729	0.85505	0.00026224	-1.875	-0.00057505	306.6943590243008	30.071	0.37115	30.071	29.946	30.317	0					15	11	2	0	0	0	0.11954	1	12682	12682		0	0	1	388290	+		15834	11518	7373	7407	18624	18624					0.1458403872807139
KQTALVELLK	10	Unmodified	_KQTALVELLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.8625366091728	2	571.860806	1141.70706	1.4005	0.00080091	-0.74314	-0.00042497	0.65739	0.00037593	571.8603858313083	38.315	0.48766	38.315	38.132	38.62	0					54	22	4	0	0	0	0.070319	3	16013	16013;16062;16103		157.24	60.309	1	9348300		+	15835	341	7374	7408	18625;18626;18627	18625					0.14187420125381323
KQTALVELLK	10	Unmodified	_KQTALVELLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5764343142509	3	381.576296	1141.70706	-0.44456	-0.00016963	0.39611	0.00015115	-0.048445	-1.8485E-05	381.57661201813625	38.333	0.53088	38.333	38.154	38.685	0					55	24	4	0	0	0	0.068876	2	16074	16027;16074		55.839	35.258	1	6178300		+	15836	341	7374	7408	18628;18629	18629					0.14187420125381323
KQTALVELLK	10	Unmodified	_KQTALVELLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.8612548708916	2	571.860806	1141.70706	1.4225	0.00081347	-0.43457	-0.00024852	0.98793	0.00056496	571.8604402148854	37.64	0.43328	37.944	37.738	38.171	0.30497					28	15	2	0	0	0	0.061164	3	15829	15783;15829;15871		94.801	37.552	1	3150000		+	15837	341	7374	7408	18630;18631;18632	18631					0.14187420125381323
KQTALVELLK	10	Unmodified	_KQTALVELLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8605224490166	2	571.860806	1141.70706	0.82836	0.0004737	0.37422	0.000214	1.2026	0.00068771	571.8606395074183	35.149	0.15217	36.967	36.855	37.007	1.8176					16	13	2	0	0	0	0.20739	1	14747	14747		48.073	16.035	1	2232800		+	15838	341	7374	7408	18633	18633					0.14187420125381323
KQTLTFFDE	9	Unmodified	_KQTLTFFDE_					0	0	0		ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	376.8573486208916	3	376.85724	1127.54989	0.44733	0.00016858	1.3969	0.00052643	1.8442	0.00069501	376.8578988795683	86.213	0.54136	86.213	85.978	86.519	0					62	17	6	0	0	0	0.7849	1	35942	35942		2.2828	0.3764	1	6116100			15839	3997	7375	7409	18634	18634					-0.008782844848155946
KQTLTFFDE	9	Unmodified	_KQTLTFFDE_					0	0	0		ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	376.8577758669853	3	376.85724	1127.54989	2.4592	0.00092677	0.93658	0.00035296	3.3958	0.0012797	376.85712512023105	86.049	0.48768	86.301	86.068	86.556	0.25227					37	15	3	0	0	0	0.7849	2	35964	35964;36011		2.2828	0.69049	1	3412300			15840	3997	7375	7409	18635;18636	18635					-0.008782844848155946
KQTRVIKRHIR	11	Unmodified	_KQTRVIKRHIR_					0	0	0			REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	REV__ENST00000367142.4_1_1:205693083-205719238:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4831420779228	4	359.48366	1433.90553	-1.4661	-0.00052705	0.70686	0.00025411	-0.75927	-0.00027294	359.4837822059677	28.892	0.82907	28.892	28.287	29.116	0					91	26	6	0	0	0	1.0372	2	12066	12016;12066		1.0136	0	1	19242000	+		15841	12620	7376	7410	18637;18638	18638					0.2059369854760007
KQVEEIFNL	9	Unmodified	_KQVEEIFNL_					0	0	0		ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3052856326103	2	560.305864	1118.59717	1.4643	0.00082047	-1.185	-0.00066395	0.27935	0.00015652	560.3053101538377	53.389	0.35737	53.389	53.225	53.583	0					19	12	2	0	0	0	0.033102	1	22271	22271		82.529	23.85	1	2014900			15842	5428	7377	7411	18639	18639					0.04261994786179457
KQVEEIFNL	9	Unmodified	_KQVEEIFNL_					0	0	0		ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3049194216728	2	560.305864	1118.59717	1.6617	0.00093104	-2.1662	-0.0012137	-0.50453	-0.00028269	560.3045750316173	52.744	0.28038	53.067	52.922	53.202	0.32283					17	9	2	0	0	0	0.075994	2	22068	22068;22112		57.722	12.022	1	2126900			15843	5428	7377	7411	18640;18641	18640					0.04261994786179457
KQVEEIFNL	9	Unmodified	_KQVEEIFNL_					0	0	0		ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3071166872978	2	560.305864	1118.59717	0.77154	0.0004323	0.87417	0.0004898	1.6457	0.0009221	560.3059662772463	51.426	0.35869	52.82	52.558	52.917	1.3938					27	11	4	0	0	0	0.015029	2	21538	21488;21538		103.35	14.028	1	5350900			15844	5428	7377	7411	18642;18643	18643					0.04261994786179457
KQVEEIFNL	9	Unmodified	_KQVEEIFNL_					0	0	0		ENST00000544802.5_1_7:72593260-72619478:+|nuORF;nc|ENSG00000263001|P78347-2|GTF2I;nc|ENSG00000263001|P78347-4|GTF2I;nc|ENSG00000263001|P78347-3|GTF2I;ENSG00000263001|ENST00000573035|GTF2I	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	ENST00000544802.5_1_7:72593260-72619478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3072997927666	2	560.305864	1118.59717	0.082916	4.6458E-05	2.4646	0.0013809	2.5475	0.0014274	560.3069477952839	50.817	0.33697	52.792	52.575	52.912	1.9753					27	10	3	0	0	0	0.0033884	1	21292	21292		126.57	37.662	1	4739600			15845	5428	7377	7411	18644	18644					0.04261994786179457
KQWLKEYKKWN	11	Unmodified	_KQWLKEYKKWN_					0	0	0			REV__tr|A0A553SS38|A0A553SS38_NIACIGer(X)CfamilysporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_02370PE=3SV=1	REV__tr|A0A553SS38|A0A553SS38_NIACIGer(X)CfamilysporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_02370PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6255370974541	3	517.620788	1549.84053	1.9058	0.00098649	1.5065	0.00077981	3.4124	0.0017663	517.6221293879064	47.177	4.8522	47.508	46.848	51.7	0.33034					537	158	6	0	0	0	0.98155	1	21421	21421		2.2527	1.0379	1	123180000	+		15846	15192	7378	7412	18645	18645					0.08760659231074897
KQWNKRWLVL	10	Unmodified	_KQWNKRWLVL_					0	0	0		PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9114868044853	2	685.906414	1369.79827	2.0782	0.0014254	2.0813	0.0014276	4.1595	0.0028531	685.9083235807125	81.915	0.70761	82.195	81.937	82.644	0.2802					38	22	2	0	0	0	0.89803	1	34262	34262		0.40072	0	1	1092100			15847	8057	7379	7413	18646	18646					0.12816728613370287
KQWNKRWLVL	10	Unmodified	_KQWNKRWLVL_					0	0	0		PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	PLEKHA6|p.F82L|1|0.24|ENSG00000143850|chr1:204267509-204267509|G/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	685.906414	1369.79827	2.7989	0.0019198	2.0655	0.0014167	4.8644	0.0033365	685.9078020408679	81.053	0.55683	82.287	82.161	82.718	1.2332	0.025517	-0.00058876	NaN	0.40072	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	748020			15848	8057	7379	7413							0.12816728613370287
KQYKHIIDCV	10	Unmodified	_KQYKHIIDCV_					0	0	0		ENST00000418448.1_1_13:57888978-57889152:+|nuORF	ENST00000418448.1_1_13:57888978-57889152:+|nuORF	ENST00000418448.1_1_13:57888978-57889152:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.8339721560478	2	623.834265	1245.65398	1.3746	0.00085752	-2.8528	-0.0017797	-1.4782	-0.00092216	623.8324762455309	46.039	0.40895	47.415	47.177	47.586	1.3751					30	12	3	0	0	0	0.85995	1	19253	19253		6.2058	0	1	1841300			15849	6425	7380	7414	18647	18647					0.0409771907106915
KRAFKKRKN	9	Unmodified	_KRAFKKRKN_					0	0	0		tr|A0A553SPW2|A0A553SPW2_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26940PE=4SV=1	tr|A0A553SPW2|A0A553SPW2_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26940PE=4SV=1	tr|A0A553SPW2|A0A553SPW2_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26940PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3795654177666	2	588.377823	1174.74109	3.1827	0.0018726	0.011862	6.9794E-06	3.1945	0.0018796	588.3777152486156	105.95	0.19836	106.11	106	106.2	0.15859					31	9	5	0	0	0	0.85019	1	45239	45239		0.52476	0	1	528730000			15850	16485	7381	7415	18648	18648					0.16071306127651042
KRAHLLFPP	9	Unmodified	_KRAHLLFPP_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2221252322197	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.914	1	20.107	19.607	20.607	0.19342								0	0	0	0.42693	1	8275	8275		1.1933	0	1				15851	4563	7382	7416	18649	18649					0.109017385676907
KRAHLLFPP	9	Unmodified	_KRAHLLFPP_					0	0	0		ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	ENSG00000180921|ENST00000388913|FAM83H	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2219726443291	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.455	1	19.435	18.935	19.935	0.97922								0	0	0	0.42693	1	7686	7686		1.1933	0	1				15852	4563	7382	7416	18650	18650					0.109017385676907
KRAVKVKHVKR	11	Unmodified	_KRAVKVKHVKR_					0	0	0		ENST00000590234.5_1_18:47810059-47811374:-|nuORF;ENST00000590901.5_1_18:47808965-47812340:-|nuORF;ENSG00000154832|ENST00000285106|CXXC1;nc|ENSG00000154832|Q9P0U4-2|CXXC1	ENST00000590234.5_1_18:47810059-47811374:-|nuORF	ENST00000590234.5_1_18:47810059-47811374:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9827148318291	4	337.980753	1347.89391	0.3906	0.00013202	3.4393	0.0011624	3.8299	0.0012944	337.981818844711	25.856	0.69783	26.108	25.797	26.495	0.25197					55	22	4	0	0	0	1.0402	1	10821	10821		0.094841	0.011491	1	2176100			15853	3398	7383	7417	18651	18651					0.23387501524234722
KRAWRIKFF	9	Unmodified	_KRAWRIKFF_					0	0	0			REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6928893923759	4	313.692284	1250.74003	0.43376	0.00013607	1.4069	0.00044132	1.8406	0.00057739	313.69266584695777	30.082	0.53829	30.368	29.963	30.501	0.2859					72	17	5	0	0	0	0.76456	4	12591	12492;12538;12591;12643		2.7352	1.1429	1	31019000	+		15854	8303	7384	7418	18652;18653;18654;18655	18654					0.12469091758725881
KRAWRIKFF	9	Unmodified	_KRAWRIKFF_					0	0	0			REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6924621462822	4	313.692284	1250.74003	-0.29721	-9.3233E-05	1.385	0.00043446	1.0878	0.00034123	313.69266729433843	28.894	0.54902	30.177	29.794	30.343	1.2825					68	17	5	0	0	0	0.83213	1	12055	12055		1.0715	1.0715	1	30056000	+		15855	8303	7384	7418	18656	18656					0.12469091758725881
KRAWRIKFF	9	Unmodified	_KRAWRIKFF_					0	0	0			REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6924011111259	4	313.692284	1250.74003	0.061516	1.9297E-05	0.68587	0.00021515	0.74738	0.00023445	313.69242795483547	28.302	0.51793	30.077	29.665	30.183	1.7754					62	16	4	0	0	0	0.83213	1	11813	11813		1.0715	0.56551	1	33547000	+		15856	8303	7384	7418	18657	18657					0.12469091758725881
KRAWRIKFF	9	Unmodified	_KRAWRIKFF_					0	0	0			REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	REV__chr2:61971546-62000701|178|16.43|0.64|4.67|+|0|TE_info:LTR10D,LTR10D_dup12,ERV1,LTR,donor,-,61971116,61971546|None,COMMD1|5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	313.692284	1250.74003	0.43376	0.00013607	1.4069	0.00044132	1.8406	0.00057739	313.69266584695777	30.082	0.53829	30.368	29.963	30.501	0.2859	-0.11173	0.00063773	NaN	2.7352	72	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31019000	+		15857	8303	7384	7418							0.12469091758725881
KRDYEYNLTT	10	Unmodified	_KRDYEYNLTT_					0	0	0			REV__ENST00000484559.1_1_2:160728960-160761235:-|nuORF	REV__ENST00000484559.1_1_2:160728960-160761235:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8832275271416	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.074	1	46.018	45.518	46.518	1.9438								0	0	0	0.6623	1	18477	18477		0.56317	0.057215	1		+		15858	8630	7385	7419	18658	18658					-0.01356727024403881
KREEEKPFRDY	11	Unmodified	_KREEEKPFRDY_					0	0	0		ANGPT1|p.C286Y|1|0.26|ENSG00000154188|chr8:107303319-107303319|C/T|missense_variant	ANGPT1|p.C286Y|1|0.26|ENSG00000154188|chr8:107303319-107303319|C/T|missense_variant	ANGPT1|p.C286Y|1|0.26|ENSG00000154188|chr8:107303319-107303319|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.5896789431572	3	499.587924	1495.74194	0.49168	0.00024564	2.1966	0.0010974	2.6883	0.0013431	499.589273346025	15.684	0.61984	15.684	15.467	16.087	0					67	19	6	0	0	0	1.0108	1	6519	6519		3.134	0.29067	1	14126000			15859	62	7386	7420	18659	18659					0.013900111953716987
KRELGVRRPG	10	Unmodified	_KRELGVRRPG_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;ENST00000563032.1_1_16:89940075-89941239:+|nuORF;ENST00000561585.1_1_16:89940075-89949929:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3575317263603	2	584.357088	1166.69962	1.9193	0.0011216	-1.138	-0.00066499	0.78131	0.00045656	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.89803	1	31460	31460		1.4819	0.15237	1	6168700			15860	2944	7387	7421	18660	18660					0.122941253683166
KRFIISILFII	11	Unmodified	_KRFIISILFII_					0	0	0		tr|A0A7D6ZQ89|A0A7D6ZQ89_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23400PE=4SV=1	tr|A0A7D6ZQ89|A0A7D6ZQ89_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23400PE=4SV=1	tr|A0A7D6ZQ89|A0A7D6ZQ89_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23400PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4776183962822	4	341.477246	1361.87988	0.56529	0.00019304	0.87601	0.00029914	1.4413	0.00049217	341.4774933030518	28.288	1.3083	28.559	28.243	29.551	0.27119					128	42	4	0	0	0	1.0402	1	11814	11814		0.094841	0	1	8660700			15861	17122	7388	7422	18661	18661					0.21341411252615217
KRFKAKLSK	9	Unmodified	_KRFKAKLSK_					0	0	0			REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3622924685478	2	553.36385	1104.71315	3.1523	0.0017444	-4.4694	-0.0024732	-1.3171	-0.00072883	553.3604049319422	107.02	0.1674	107.18	107.11	107.27	0.16174					14	7	2	0	0	0	0.83213	1	45894	45894		2.0598	0	1	14079000	+		15862	8593	7389	7423	18662	18662					0.16497983147542072
KRFKAKLSK	9	Unmodified	_KRFKAKLSK_					0	0	0			REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	553.36385	1104.71315	3.0255	0.0016742	-3.3358	-0.0018459	-0.31025	-0.00017168	553.3610478127949	107.02	0.28235	107.18	107.08	107.36	0.15781	-0.00051401	0.000499	NaN	2.0598	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11517000	+		15863	8593	7389	7423							0.16497983147542072
KRFKAKLSK	9	Unmodified	_KRFKAKLSK_					0	0	0			REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	REV__ENST00000515799.5_1_5:34687009-34688178:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	553.36385	1104.71315	3.1523	0.0017444	-4.4694	-0.0024732	-1.3171	-0.00072883	553.3604049319422	107.02	0.1674	107.18	107.11	107.27	0.16174	0.00051401	-0.00075562	NaN	2.0598	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14079000	+		15864	8593	7389	7423							0.16497983147542072
KRFLVGKG	8	Unmodified	_KRFLVGKG_					0	0	0			REV__ENST00000498128.1_1_1:46108161-46120330:-|nuORF	REV__ENST00000498128.1_1_1:46108161-46120330:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1963683962822	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.668	1	35.668	35.168	36.168	0								0	0	0	1.0178	1	14952	14952		0.40072	0	1		+		15865	13488	7390	7424	18663	18663					0.10978091613583274
KRFRRKRVNKL	11	Unmodified	_KRFRRKRVNKL_					0	0	0			REV__ENSG00000178913|ENST00000313368|TAF7	REV__ENSG00000178913|ENST00000313368|TAF7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1277343630791	5	301.00002	1499.96372	-0.19481	-5.8638E-05	0.53587	0.0001613	0.34106	0.00010266	301.20086118835053	21.797	0.13522	23.413	23.351	23.486	1.6158					6	4	2	0	0	0	0.14606	1	9109	9109		0	0	1	442260	+		15866	11260	7391	7425	18664	18664					0.23373380192879267
KRGGVAAT	8	Unmodified	_KRGGVAAT_					0	0	0			REV__ENSG00000153531|ENST00000612156|ADPRHL1	REV__ENSG00000153531|ENST00000612156|ADPRHL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2272827029228	2	380.22722	758.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.046	1	75.37	74.87	75.87	0.32464								0	0	0	1.0178	1	31389	31389		0.69038	0	1		+		15867	10454	7392	7426	18665	18665					0.05100379757323026
KRGKMKGP	8	Unmodified	_KRGKMKGP_					0	0	0			REV__ENSG00000198650|ENST00000355962|TAT	REV__ENSG00000198650|ENST00000355962|TAT	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1841613650322	3	301.184857	900.532741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.415	1	85.415	84.915	85.915	0								0	0	0	1.0178	1	35588	35588		0.40072	0	1		+		15868	11721	7393	7427	18666	18666					0.07849561219063617
KRGKMKGP	8	Unmodified	_KRGKMKGP_					0	0	0			REV__ENSG00000198650|ENST00000355962|TAT	REV__ENSG00000198650|ENST00000355962|TAT	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1842224001884	3	301.184857	900.532741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.539	1	85.539	85.039	86.039	0								0	0	0	1.0178	1	35640	35640		0.40072	0	1		+		15869	11721	7393	7427	18667	18667					0.07849561219063617
KRGKPVKPV	9	Unmodified	_KRGKPVKPV_					0	0	0			REV__ENSG00000184897|ENST00000333762|H1-10	REV__ENSG00000184897|ENST00000333762|H1-10	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.8954955935478	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.78	1	115.82	115.32	116.32	0.041786								0	0	0	0.42693	1	49801	49801		0.23584	0	1		+		15870	11432	7394	7428	18668	18668					0.15686025084744415
KRGPPRVVA	9	Unmodified	_KRGPPRVVA_					0	0	0			REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	REV__nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.2096435427666	3	327.210171	978.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.867	1	35.142	34.642	35.642	1.2746								0	0	0	0.42693	1	14215	14215		2.4985	0	1		+		15871	14440	7395	7429	18669	18669					0.11852281390849839
KRGRREWRRK	10	Unmodified	_KRGRREWRRK_					0	0	0		ENST00000486943.1_3_X:49065690-49065852:-|nuORF	ENST00000486943.1_3_X:49065690-49065852:-|nuORF	ENST00000486943.1_3_X:49065690-49065852:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	476.6245300173759	3	476.623748	1426.84942	3.5157	0.0016757	-1.0579	-0.00050424	2.4577	0.0011714	476.62304678041835	97.624	0.15793	97.715	97.62	97.778	0.090881					12	4	4	0	0	0	0.89803	1	40844	40844		0.15932	0	1	15722000			15872	6871	7396	7430	18670	18670					0.15306490430748454
KRGSLKTLK	9	Unmodified	_KRGSLKTLK_					0	0	0		ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2277099490166	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.174	1	25.174	24.674	25.674	0								0	0	0	0.42693	1	10505	10505		0.26902	0	1				15873	5861	7397	7431	18671	18671					0.1522170387654569
KRGSLKTLK	9	Unmodified	_KRGSLKTLK_					0	0	0		ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2281371951103	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.82	1	113.82	113.32	114.32	0								0	0	0	0.42693	1	49164	49164		0.26902	0	1				15874	5861	7397	7431	18672	18672					0.1522170387654569
KRGSLKTLK	9	Unmodified	_KRGSLKTLK_					0	0	0		ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2280151247978	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.03	1	115.03	114.53	115.53	0								0	0	0	0.42693	1	49649	49649		0.26902	0	1				15875	5861	7397	7431	18673	18673					0.1522170387654569
KRGSLKTLK	9	Unmodified	_KRGSLKTLK_					0	0	0		ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2274658083916	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.31	1	117.31	116.81	117.81	0								0	0	0	0.42693	1	50582	50582		0.26902	0	1				15876	5861	7397	7431	18674	18674					0.1522170387654569
KRGSLKTLK	9	Unmodified	_KRGSLKTLK_					0	0	0		ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	ENST00000323468.9_1_11:108344225-108344408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2279235720634	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.12	1	119.12	118.62	119.62	0								0	0	0	0.42693	1	51309	51309		0.26902	0	1				15877	5861	7397	7431	18675	18675					0.1522170387654569
KRHRIIIKKGR	11	Unmodified	_KRHRIIIKKGR_					0	0	0			REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9747192263603	2	702.972954	1403.93135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.321	1	18.321	17.821	18.821	0								0	0	0	0.63775	1	7613	7613		0	0	1		+		15878	14170	7398	7432	18676	18676					0.24554592789854723
KRHRIIIKKGR	11	Unmodified	_KRHRIIIKKGR_					0	0	0			REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9731933474541	2	702.972954	1403.93135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.719	1	18.719	18.219	19.219	0								0	0	0	0.63775	1	7781	7781		0	0	1		+		15879	14170	7398	7432	18677	18677					0.24554592789854723
KRHRIIIKKGR	11	Unmodified	_KRHRIIIKKGR_					0	0	0			REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	REV__Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|89|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9723388552666	2	702.972954	1403.93135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.09	1	19.09	18.59	19.59	0								0	0	0	0.63775	1	7933	7933		0.30703	0	1		+		15880	14170	7398	7432	18678	18678					0.24554592789854723
KRHRRRYKLLL	11	Unmodified	_KRHRRRYKLLL_					0	0	0			REV__ENSG00000125266|ENST00000646441|EFNB2	REV__ENSG00000125266|ENST00000646441|EFNB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1537353396416	4	385.502118	1537.97937	-0.18297	-7.0534E-05	1.7979	0.0006931	1.615	0.00062257	385.75418333484345	79.57	0.15557	79.57	79.485	79.641	0					6	4	2	0	0	0	0.14606	1	33116	33116		0	0	1	259320	+		15881	9663	7399	7433	18679	18679					0.23189666709936319
KRHRWFYV	8	Unmodified	_KRHRWFYV_					0	0	0			REV__ENST00000395756.5_1_17:17715938-17721122:-|nuORF	REV__ENST00000395756.5_1_17:17715938-17721122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.3333618044853	2	596.330342	1190.64613	2.2688	0.0013529	4.2668	0.0025444	6.5355	0.0038973	596.332480510954	93.218	0.3142	93.218	93.013	93.327	0					14	9	3	0	0	0	0.89176	1	38961	38961		0.79363	0.19213	1	856490	+		15882	8735	7400	7434	18680	18680					0.058433726564544486
KRIFQQFRKDR	11	Unmodified	_KRIFQQFRKDR_					0	0	0			REV__ARHGEF2|p.D414Lfs*135|1|0.04|ENSG00000116584|chr1:155961889-155961890|-/GTAG|frameshift_variant	REV__ARHGEF2|p.D414Lfs*135|1|0.04|ENSG00000116584|chr1:155961889-155961890|-/GTAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2981750369072	3	507.963548	1520.86881	1.0803	0.00054873	-3.4205	-0.0017375	-2.3402	-0.0011888	507.9618212675483	31.006	0.77989	32.287	31.934	32.714	1.2813					50	24	3	0	0	0	1.0391	1	13050	13050		0.40827	0.31342	1	1022000	+		15883	8139	7401	7435	18681	18681					0.129214019309984
KRIHFLAV	8	Unmodified	_KRIHFLAV_					0	0	0			REV__ENSG00000188763|ENST00000344575|FZD9	REV__ENSG00000188763|ENST00000344575|FZD9	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.3113281130791	2	492.311087	982.60762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.717	1	48.717	48.217	49.217	0								0	0	0	1.0178	1	20344	20344		10.183	2.8942	1		+		15884	11584	7402	7436	18682	18682					0.11562067021930034
KRIKLAAE	8	Unmodified	_KRIKLAAE_					0	0	0		tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2034484744072	3	310.202793	927.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.92	1	103.1	102.6	103.6	0.18066								0	0	0	1.0178	1	43310	43310		1.6526	0	1				15885	17278	7403	7437	18683	18683					0.11986056922398802
KRINVLPLGR	10	Unmodified	_KRINVLPLGR_					0	0	0		ENST00000487982.5_1_7:65541068-65551857:+|nuORF	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2543517947197	3	389.25578	1164.74551	-0.57311	-0.00022308	-3.3039	-0.0012861	-3.877	-0.0015092	389.2547763831149	29.807	0.58382	29.807	29.608	30.192	0					82	18	6	0	0	0	0.89588	2	12403	12403;12442		1.9064	0.1641	1	134340000			15886	6884	7404	7438	18684;18685	18684					0.16972770550569294
KRIRPLALRFF	11	Unmodified	_KRIRPLALRFF_					0	0	0			REV__ENSG00000116032|ENST00000234389|GRIN3B	REV__ENSG00000116032|ENST00000234389|GRIN3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.9716064333916	3	472.969863	1415.88776	2.1816	0.0010318	0.83397	0.00039444	3.0156	0.0014263	472.97020390575227	35.68	0.47717	35.979	35.831	36.308	0.29942					84	43	4	0	0	0	1.0402	2	14958	14958;15036		0.094841	0	1	46105000	+		15887	9465	7405	7439	18686;18687	18686					0.19644983292687357
KRKILQLV	8	Unmodified	_KRKILQLV_					0	0	0		nc|ENSG00000172053|P47897-2|QARS1;ENSG00000172053|ENST00000306125|QARS1	nc|ENSG00000172053|P47897-2|QARS1	nc|ENSG00000172053|P47897-2|QARS1	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3507263064384	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.358	1	96.358	95.858	96.858	0								0	0	0	1.0178	1	40281	40281		0.79363	0	1				15888	4226	7406	7440	18688	18688					0.18231195744579054
KRKKAKFVL	9	Unmodified	_KRKKAKFVL_					0	0	0			REV__ENST00000306376.9_1_3:185765504-185765672:-|nuORF	REV__ENST00000306376.9_1_3:185765504-185765672:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3852416872978	2	559.382043	1116.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.77	1	108.82	108.32	109.32	0.050644								0	0	0	0.42693	1	46811	46811		0.6015	0	1		+		15889	12338	7407	7441	18689	18689					0.19582860044260997
KRKKALLAKAI	11	Unmodified	_KRKKALLAKAI_					0	0	0		nc|ENSG00000120370|Q5T7V8-2|GORAB;ENSG00000120370|ENST00000367763|GORAB	nc|ENSG00000120370|Q5T7V8-2|GORAB	nc|ENSG00000120370|Q5T7V8-2|GORAB	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4366332888603	2	620.434807	1238.85506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.33	1	108.33	107.83	108.83	0								0	0	0	0.63775	1	46659	46659		0.30703	0	1				15890	2102	7408	7442	18690	18690					0.24518776169907142
KRKKKGTL	8	Unmodified	_KRKKKGTL_					0	0	0			REV__ENST00000537363.5_1_19:10664629-10670250:-|nuORF	REV__ENST00000537363.5_1_19:10664629-10670250:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2220947146416	3	320.222188	957.644734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.11	1	104.11	103.61	104.61	0								0	0	0	1.0178	1	43876	43876		0	0	1		+		15891	9754	7409	7443	18691	18691					0.16421738567714783
KRKKKKKKRPS	11	Unmodified	_KRKKKKKKRPS_					0	0	0			REV__ENSG00000055483|ENST00000449938|USP36	REV__ENSG00000055483|ENST00000449938|USP36	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3309509158134	3	471.32805	1410.96232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.25	1	110.41	109.91	110.91	0.16133								0	0	0	0.63775	1	47898	47898		0.073264	0.073264	1		+		15892	8635	7410	7444	18692	18692					0.27327746104106154
KRKKKVTKCL	10	Unmodified	_KRKKKVTKCL_					0	0	0			REV__nc|ENSG00000114541|Q9Y2L6-2|FRMD4B	REV__nc|ENSG00000114541|Q9Y2L6-2|FRMD4B	MSMS	GG20161007_CRH_Patient100_W632_01	3	411.2733947634697	3	411.272554	1230.79583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.03	1	111.2	110.7	111.7	0.16445								0	0	0	0.66264	1	48197	48197		0	0	1		+		15893	9408	7411	7445	18693	18693					0.18966556884060992
KRKKLKELIY	10	Unmodified	_KRKKLKELIY_					0	0	0		tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	330.4711486697197	4	330.469687	1317.84964	0.16437	5.432E-05	3.4541	0.0011415	3.6185	0.0011958	330.7213014699698	27.952	0.89287	29.727	29.078	29.971	1.7754					40	28	2	0	0	0	0.89803	1	11688	11688		0.15932	0.01943	1	1205000			15894	16243	7412	7446	18694	18694					0.20343052587418242
KRKKLKELIY	10	Unmodified	_KRKKLKELIY_					0	0	0		tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	tr|A0A553SJD7|A0A553SJD7_NIACI3-hydroxyacyl-CoAdehydrogenase/enoyl-CoAhydratasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_16645PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	330.469687	1317.84964	-0.22734	-7.513E-05	4.6989	0.0015529	4.4716	0.0014777	330.7221091079253	28.189	0.4839	29.468	29.184	29.668	1.2789	-0.12953	0.00059524	NaN	0.15932	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802790			15895	16243	7412	7446							0.20343052587418242
KRKKRKRDKH	10	Unmodified	_KRKKRKRDKH_					0	0	0			REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.1493102908134	4	345.725918	1378.87457	0.936	0.0003236	-2.5658	-0.00088706	-1.6298	-0.00056346	345.7253174995435	34.237	0.56303	34.534	34.327	34.891	0.29701					29	19	3	0	0	0	0.12561	1	14291	14291		0.15932	0.064481	1	660100	+		15896	8172	7413	7447	18695	18695					0.2002854523334463
KRKKRKRDKH	10	Unmodified	_KRKKRKRDKH_					0	0	0			REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	REV__ENST00000466133.1_1_3:159818637-159819075:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	345.725918	1378.87457	0.37142	0.00012841	-3.2196	-0.0011131	-2.8482	-0.00098468	345.97571082065514	32.5	0.54638	34.325	34.032	34.579	1.8246	-0.10467	-0.0002681	NaN	0.15932	35	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2266100	+		15897	8172	7413	7447							0.2002854523334463
KRKLIIIKL	9	Unmodified	_KRKLIIIKL_					0	0	0			REV__ENSG00000162753|ENST00000367714|SLC9C2	REV__ENSG00000162753|ENST00000367714|SLC9C2	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9160644412041	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.75	1	108.91	108.41	109.41	0.1548								0	0	0	0.42693	1	47021	47021		0.52476	0.52476	1		+		15898	10661	7414	7448	18696	18696					0.25992890255224665
KRKNIHLPK	9	Unmodified	_KRKNIHLPK_					0	0	0		tr|A0A553SFE4|A0A553SFE4_NIACIGlucosamine-6-phosphatedeaminaseOS=NialliacirculansOX=1397GN=nagBPE=3SV=1	tr|A0A553SFE4|A0A553SFE4_NIACIGlucosamine-6-phosphatedeaminaseOS=NialliacirculansOX=1397GN=nagBPE=3SV=1	tr|A0A553SFE4|A0A553SFE4_NIACIGlucosamine-6-phosphatedeaminaseOS=NialliacirculansOX=1397GN=nagBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5790283083916	3	378.580375	1132.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.181	1	31.472	30.972	31.972	0.29086								0	0	0	0.42693	1	13087	13087		0.96228	0.26461	1				15899	16051	7415	7449	18697	18697					0.1582450137905198
KRKRLWGGLW	10	Unmodified	_KRKRLWGGLW_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3967773318291	2	650.393474	1298.77239	2.4864	0.0016171	3.132	0.002037	5.6184	0.0036542	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	0.87343	4	33576	33576;33621;33912;34105		4.3292	0.73274	1	5912000	+		15900	11528	7416	7450	18698;18699;18700;18701	18698					0.13495879161746416
KRKRLWGGLW	10	Unmodified	_KRKRLWGGLW_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3962890505791	2	650.393474	1298.77239	1.4428	0.00093839	3.0734	0.0019989	4.5162	0.0029373	650.3954296335871	80.232	1.1244	81.948	81.631	82.755	1.7167					53	36	2	0	0	0	0.87343	5	33704	33553;33704;33752;33921;33972		4.3292	1.334	1	7773900	+		15901	11528	7416	7450	18702;18703;18704;18705;18706	18703					0.13495879161746416
KRKRLWGGLW	10	Unmodified	_KRKRLWGGLW_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3951904177666	2	650.393474	1298.77239	3.4037	0.0022138	3.2439	0.0021098	6.6476	0.0043236	650.3952588752416	81.34	0.52383	83.036	82.735	83.258	1.6959					32	16	2	0	0	0	0.89646	3	34043	34043;34145;34196		1.8442	0.19162	1	1053100	+		15902	11528	7416	7450	18707;18708;18709	18707					0.13495879161746416
KRKRLWGGLW	10	Unmodified	_KRKRLWGGLW_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	650.393474	1298.77239	1.4428	0.00093839	3.0734	0.0019989	4.5162	0.0029373	650.3954296335871	80.232	1.1244	81.948	81.631	82.755	1.7167	0.24958	0.00041823	NaN	4.3292	53	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7773900	+		15903	11528	7416	7450							0.13495879161746416
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2483703494072	5	304.400836	1516.9678	-2.8212	-0.00085878	1.4774	0.00044971	-1.3439	-0.00040908	304.60204675621213	28.097	0.64638	28.097	27.889	28.535	0					34	20	3	0	0	0	0.14606	1	11929	11929		0	0	1	1725800	+		15904	12461	7417	7451	18710	18710					0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2480651736259	5	304.400836	1516.9678	0.22664	6.899E-05	0.443	0.00013485	0.66964	0.00020384	304.60158839300703	26.06	0.87251	26.316	26.138	27.011	0.25604					92	28	4	0	0	0	0.14606	1	11135	11135		0	0	1	9587600	+		15905	12461	7417	7451	18711	18711					0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2482787966728	5	304.400836	1516.9678	0.33534	0.00010208	0.99407	0.0003026	1.3294	0.00040467	304.4011512645416	28.17	0.94882	28.441	28.088	29.037	0.27119					66	30	3	0	0	0	0.14606	1	11725	11725		0	0	1	1882600	+		15906	12461	7417	7451	18712	18712					0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	759.4962646365166	2	759.491176	1516.9678	2.7528	0.0020908	3.8705	0.0029396	6.6233	0.0050303	759.4932973570432	107.1	0.22659	107.26	107.17	107.4	0.16174					26	10	4	0	0	0	1.0402	1	45943	45943		0	0	1	21709000	+		15907	12461	7417	7451	18713	18713					0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483398318291	5	304.400836	1516.9678	0.1346	4.0972E-05	2.2198	0.00067572	2.3544	0.00071669	304.4016124008898	29.948	0.71205	31.763	31.646	32.358	1.8151					28	22	2	0	0	0	0.14606	1	12651	12651		0	0	1	1436000	+		15908	12461	7417	7451	18714	18714					0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	759.491176	1516.9678	1.3414	0.0010188	4.2099	0.0031974	5.5513	0.0042161	759.4917546065074	107.18	0.11809	107.18	107.11	107.23	0	-0.05492	-0.00088999	NaN	0	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14812000	+		15909	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		5	304.400836	1516.9678	-2.6586	-0.00080928	3.4056	0.0010367	0.747	0.00022739	304.6025706120332	31.794	0.38149	31.794	31.629	32.01	0	0.068701	3.9541E-05	NaN	0	30	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625110	+		15910	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	759.491176	1516.9678	2.7308	0.002074	3.625	0.0027532	6.3558	0.0048272	759.4920259298248	107.15	0.11162	107.2	107.14	107.25	0.052452	-0.031012	-0.0017784	NaN	0	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8187800	+		15911	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		5	304.400836	1516.9678	0.52076	0.00015852	2.9726	0.00090487	3.4934	0.0010634	304.4015899076942	31.57	0.61451	31.861	31.66	32.274	0.29086	0.1356	-0.00061947	NaN	0	35	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1858900	+		15912	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	759.491176	1516.9678	2.5024	0.0019006	5.591	0.0042463	8.0934	0.0061469	759.4950199063454	107.13	0.22508	107.29	107.19	107.41	0.15781	0.055666	0.0012079	NaN	0	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62698000	+		15913	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		5	304.400836	1516.9678	-0.44402	-0.00013516	4.0946	0.0012464	3.6506	0.0011112	304.60275289653146	30.2	0.89616	31.483	31.225	32.121	1.2825	-0.24221	0.0010882	NaN	0	57	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2011100	+		15914	12461	7417	7451							0.2299942489592013
KRKRRELYLKK	11	Unmodified	_KRKRRELYLKK_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	759.491176	1516.9678	2.7528	0.0020908	3.8705	0.0029396	6.6233	0.0050303	759.4932973570432	107.1	0.22659	107.26	107.17	107.4	0.16174	0.030266	-0.0014056	NaN	0	26	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21709000	+		15915	12461	7417	7451							0.2299942489592013
KRKVRLHT	8	Unmodified	_KRKVRLHT_					0	0	0			REV__ENST00000380121.7_1_13:33018018-33018138:-|nuORF	REV__ENST00000380121.7_1_13:33018018-33018138:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1402465701103	2	519.338167	1036.66178	3.3339	0.0017314	-3.9398	-0.0020461	-0.60597	-0.0003147	519.3357733759184	92.214	0.19601	93.541	93.47	93.666	1.3269					6	5	2	0	0	0	2.3239	1	38850	38850		0.69038	0.088878	1	220570	+		15916	12755	7418	7452	18715	18715					0.144916591735182
KRLKEYRVF	9	Unmodified	_KRLKEYRVF_					0	0	0		ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	ENST00000424459.7_2_5:56471743-56471803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8716308474541	2	619.87204	1237.72953	3.8792	0.0024046	-3.5839	-0.0022215	0.29532	0.00018306	619.8704155782959	93.123	0.22924	93.994	93.834	94.064	0.87176					9	6	2	0	0	0	0.85019	1	39212	39212		0.52476	0	1	534570			15917	6460	7419	7453	18716	18716					0.12017064313636183
KRLLRKLNILY	11	Unmodified	_KRLLRKLNILY_					0	0	0			REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	715.4727050662041	2	715.471921	1428.92929	2.7051	0.0019354	-2.5216	-0.0018042	0.18351	0.00013129	715.4700842912284	105.84	0.14204	105.89	105.8	105.94	0.05455					17	6	4	0	0	0	1.0395	1	44966	44966		0.30703	0.30703	1	34459000	+		15918	12606	7420	7454	18717	18717					0.23198119261428474
KRLLRKLNILY	11	Unmodified	_KRLLRKLNILY_					0	0	0			REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	715.4722778201103	2	715.471921	1428.92929	2.642	0.0018903	-2.3557	-0.0016854	0.28633	0.00020486	715.470032322452	105.79	0.14857	105.95	105.89	106.04	0.15859					28	7	5	0	0	0	1.0395	1	45135	45135		0.30703	0.30703	1	236400000	+		15919	12606	7420	7454	18718	18718					0.23198119261428474
KRLLRKLNILY	11	Unmodified	_KRLLRKLNILY_					0	0	0			REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	REV__ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	715.4711181521416	2	715.471921	1428.92929	2.5966	0.0018578	-3.658	-0.0026172	-1.0614	-0.00075943	715.4686520352067	107.2	0.20322	107.36	107.25	107.45	0.15795					30	9	5	0	0	0	1.0395	1	45982	45982		0.30703	0.30703	1	150040000	+		15920	12606	7420	7454	18719	18719					0.23198119261428474
KRLMRPRR	8	Unmodified	_KRLMRPRR_					0	0	0		ENSG00000168071|ENST00000356786|CCDC88B;ENST00000479965.5_1_11:64120415-64123189:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1019470095634	3	371.569705	1111.68728	1.66	0.0006168	0.9063	0.00033675	2.5663	0.00095356	371.56987543920667	78.128	0.51043	78.437	78.163	78.674	0.30933					37	15	3	0	0	0	2.3239	1	32693	32693		0.40072	0	1	1486400			15921	4014	7421	7455	18720	18720					0.13590810424284427
KRLMRPRR	8	Unmodified	_KRLMRPRR_					0	0	0		ENSG00000168071|ENST00000356786|CCDC88B;ENST00000479965.5_1_11:64120415-64123189:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1019164919853	3	371.569705	1111.68728	1.6371	0.00060828	1.0003	0.00037169	2.6374	0.00097998	371.57000372959385	76.807	0.43879	78.1	77.92	78.359	1.2938					35	13	3	0	0	0	2.3239	1	32227	32227		0.40072	0	1	1063900			15922	4014	7421	7455	18721	18721					0.13590810424284427
KRLMRPRR	8	Unmodified	_KRLMRPRR_					0	0	0		ENSG00000168071|ENST00000356786|CCDC88B;ENST00000479965.5_1_11:64120415-64123189:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017944216728	3	371.569705	1111.68728	1.7811	0.00066179	1.3526	0.0005026	3.1337	0.0011644	371.5701172040451	78.635	0.55904	79.902	79.694	80.253	1.2668					44	17	3	0	0	0	2.3239	1	33034	33034		0.40072	0	1	1099900			15923	4014	7421	7455	18722	18722					0.13590810424284427
KRLMRPRR	8	Unmodified	_KRLMRPRR_					0	0	0		ENSG00000168071|ENST00000356786|CCDC88B;ENST00000479965.5_1_11:64120415-64123189:+|nuORF;nc|ENSG00000168071|A6NC98-4|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1018859744072	3	371.569705	1111.68728	1.5461	0.0005745	0.46823	0.00017398	2.0144	0.00074848	371.5698456712876	78.16	0.52758	79.912	79.559	80.086	1.7514					43	16	3	0	0	0	2.3239	1	32810	32810		0.40072	0	1	913080			15924	4014	7421	7455	18723	18723					0.13590810424284427
KRLNRQVH	8	Unmodified	_KRLNRQVH_					0	0	0		tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	tr|A0A553SRK7|A0A553SRK7_NIACISigmafactorregulatorC-terminaldomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01280PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2432433962822	3	350.880825	1049.62064	-0.12605	-4.4229E-05	1.1962	0.00041972	1.0701	0.00037549	350.8814809838558	17.583	0.211	18.885	18.722	18.933	1.3023					8	6	2	0	0	0	2.3239	1	7261	7261		0.40072	0	1	236130			15925	16565	7422	7456	18724	18724					0.09781898134042422
KRMHSQLL	8	Unmodified	_KRMHSQLL_					0	0	0			REV__ENST00000354268.8_1_4:95162059-95162137:+|nuORF	REV__ENST00000354268.8_1_4:95162059-95162137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7911865115166	2	506.789661	1011.56477	2.7408	0.001389	-0.62317	-0.00031582	2.1177	0.0010732	506.78903914014563	72.065	0.64149	73.888	73.634	74.275	1.824					53	20	3	0	0	0	0.37084	1	30282	30282		60.39	0.31564	1	11345000	+		15926	12536	7423	7457	18725	18725					0.05944928902215452
KRMMFDNLFT	10	Unmodified	_KRMMFDNLFT_					0	0	0			REV__ENST00000518047.5_1_5:140961898-140962839:-|nuORF	REV__ENST00000518047.5_1_5:140961898-140962839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8828307986259	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.217	1	10.295	9.7951	10.795	0.077971								0	0	0	0.66254	1	4236	4236		0.15932	0	1		+		15927	13610	7424	7458	18726	18726					-0.012699271806923207
KRMRVWKTWFW	11	Unmodified	_KRMRVWKTWFW_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MSMS	GG20161007_CRH_Patient100_W632_01	3	812.4459106326103	2	812.440098	1622.86564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.229	1	70.595	70.095	71.095	1.3657								0	0	0	0.63775	1	29052	29052		0	0	1		+		15928	9953	7425	7459	18727	18727					0.07912435552657371
KRNQTREFD	9	Unmodified	_KRNQTREFD_					0	0	0		nc|ENSG00000122970|Q8WYA0-3|IFT81;ENSG00000122970|ENST00000242591|IFT81	nc|ENSG00000122970|Q8WYA0-3|IFT81	nc|ENSG00000122970|Q8WYA0-3|IFT81	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2502014040947	3	398.538904	1192.59488	-0.85528	-0.00034086	0.17365	6.9207E-05	-0.68162	-0.00027165	398.53889820650386	9.5633	0.10055	10.214	10.142	10.242	0.65058					6	5	2	0	0	0	0.11955	1	3953	3953		0.23584	0	1	248400			15929	2176	7426	7460	18728	18728					0.006289591010727236
KRPKLITY	8	Unmodified	_KRPKLITY_					0	0	0			REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8232299685478	2	509.824027	1017.6335	2.8274	0.0014415	-3.1962	-0.0016295	-0.36876	-0.000188	509.8221089010055	91.602	0.451	91.792	91.498	91.949	0.19042					33	13	3	0	0	0	0.89178	1	38301	38301		0.69038	0.16561	1	2573500	+		15930	8862	7427	7461	18729	18729					0.12538916473556583
KRQFTDLDWL	10	Unmodified	_KRQFTDLDWL_					0	0	0			REV__ENST00000524307.5_1_8:124089445-124141439:+|nuORF	REV__ENST00000524307.5_1_8:124089445-124141439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2354003787041	3	441.234822	1320.68264	1.4378	0.0006344	0.64126	0.00028294	2.079	0.00091735	441.2347994794269	94.395	0.30379	94.395	94.244	94.547	0					23	9	3	0	0	0	0.89803	1	39428	39428		0.62683	0.17231	1	1603100	+		15931	10518	7428	7462	18730	18730					0.03512159971842266
KRQIELRPR	9	Unmodified	_KRQIELRPR_					0	0	0		ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2526733279228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.82	1	85.081	84.581	85.581	0.26083								0	0	0	0.42693	1	35469	35469		0.26902	0	1				15932	5299	7429	7463	18731	18731					0.14134698402381218
KRQIELRPR	9	Unmodified	_KRQIELRPR_					0	0	0		ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509643435478	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.511	1	31.793	31.293	32.293	1.2825								0	0	0	0.42693	1	12804	12804		0.26902	0	1				15933	5299	7429	7463	18732	18732					0.14134698402381218
KRQREMQMQ	9	Unmodified	_KRQREMQMQ_					0	0	0			REV__ENST00000262467.9_2_17:5404862-5404970:-|nuORF	REV__ENST00000262467.9_2_17:5404862-5404970:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2111083865166	3	412.209625	1233.60704	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.167	1	34.464	33.964	34.964	0.29701								0	0	0	0.42693	1	14347	14347		0.23584	0	1		+		15934	12197	7430	7464	18733	18733					-0.00041463751722403686
KRQRRSKRFV	10	Unmodified	_KRQRRSKRFV_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.6196472048759	3	454.284733	1359.83237	3.4241	0.0015555	1.2509	0.00056827	4.675	0.0021238	454.6189433081645	82.34	0.34268	84.01	83.831	84.173	1.67					18	10	2	0	0	0	0.89803	1	34601	34601		0.56317	0.15491	1	1432100	+		15935	10219	7431	7465	18734	18734					0.16684569824951723
KRQRRSKRFV	10	Unmodified	_KRQRRSKRFV_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	454.284733	1359.83237	3.1483	0.0014302	0.8685	0.00039455	4.0168	0.0018248	454.2853192350757	82.861	0.18467	84.074	83.951	84.136	1.2125	0.031699	-0.00029256	NaN	0.56317	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389790	+		15936	10219	7431	7465							0.16684569824951723
KRQRRSKRFV	10	Unmodified	_KRQRRSKRFV_					0	0	0			REV__ENSG00000143669|ENST00000389793|LYST	REV__ENSG00000143669|ENST00000389793|LYST	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	454.284733	1359.83237	3.4241	0.0015555	1.2509	0.00056827	4.675	0.0021238	454.6189433081645	82.34	0.34268	84.01	83.831	84.173	1.67	-0.031699	0.00022862	NaN	0.56317	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1432100	+		15937	10219	7431	7465							0.16684569824951723
KRQRVIRRHRL	11	Unmodified	_KRQRVIRRHRL_					0	0	0		MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.M1002Nfs*3|1|0.3|ENSG00000005810|chr13:77212099-77212100|-/T|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5361511111259	5	304.400299	1516.96511	-0.12004	-3.654E-05	1.1306	0.00034414	1.0105	0.0003076	304.6011675812512	27.059	0.57014	28.331	28.235	28.805	1.2715					34	18	3	0	0	0	0.14606	1	11333	11333		0.08335	0.08335	1	3737700			15938	493	7432	7466	18735	18735					0.22731014281634998
KRQRVIRRHRL	11	Unmodified	_KRQRVIRRHRL_					0	0	0		MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.M1002Nfs*3|1|0.3|ENSG00000005810|chr13:77212099-77212100|-/T|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5362731814384	5	304.400299	1516.96511	-0.079268	-2.4129E-05	1.2989	0.00039538	1.2196	0.00037126	304.6015948264207	26.864	0.67308	28.135	27.591	28.264	1.2715					52	21	3	0	0	0	0.14606	1	11228	11228		0.094841	0.094841	1	3186500			15939	493	7432	7466	18736	18736					0.22731014281634998
KRQRVIRRHRL	11	Unmodified	_KRQRVIRRHRL_					0	0	0		MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.M1002Nfs*3|1|0.3|ENSG00000005810|chr13:77212099-77212100|-/T|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5369445681572	5	304.400299	1516.96511	0.11558	3.5183E-05	2.2684	0.0006905	2.384	0.00072569	304.4007550531922	24.716	1.1123	25.957	25.732	26.845	1.241					105	36	4	0	0	0	0.14606	1	10266	10266		0	0	1	10610000			15940	493	7432	7466	18737	18737					0.22731014281634998
KRQRVIRRHRL	11	Unmodified	_KRQRVIRRHRL_					0	0	0		MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2;MYCBP2|p.M1002Nfs*3|1|0.3|ENSG00000005810|chr13:77212099-77212100|-/T|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.8651306033134	5	304.400299	1516.96511	-0.021129	-6.4316E-06	1.7837	0.00054295	1.7625	0.00053652	304.60133117066204	26.148	0.48533	27.865	27.552	28.038	1.7167					36	15	3	0	0	0	0.14606	1	10879	10879		0.08335	0	1	3402100			15941	493	7432	7466	18738	18738					0.22731014281634998
KRRERELRRKH	11	Unmodified	_KRRERELRRKH_					0	0	0		ENST00000578653.1_1_17:27849339-27857712:+|nuORF;ENSG00000160551|ENST00000261716|TAOK1	ENST00000578653.1_1_17:27849339-27857712:+|nuORF	ENST00000578653.1_1_17:27849339-27857712:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.9863769412041	3	521.985346	1562.93421	2.8279	0.0014761	-0.059002	-3.0798E-05	2.7689	0.0014453	521.9849185403514	92.335	1.2637	92.503	91.701	92.964	0.16835					82	39	3	0	0	0	1.0405	4	38474	38474;38599;38652;38720		0	0	1	1640300			15942	3563	7433	7467	18739;18740;18741;18742	18739					0.17525816176703302
KRRGKYVV	8	Unmodified	_KRRGKYVV_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	GG20161007_CRH_Patient100_A02_02	2	503.3190795779228	2	503.319443	1004.62433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.08	1	105.14	104.64	105.64	0.056801								0	0	0	1.0178	1	44471	44471		0.79363	0	1		+		15943	10894	7434	7468	18743	18743					0.12220567907900204
KRRKKKRGLRK	11	Unmodified	_KRRKKKRGLRK_					0	0	0			REV__ENSG00000128602|ENST00000249373|SMO	REV__ENSG00000128602|ENST00000249373|SMO	MSMS	GG20161007_CRH_Patient100_W632_02	4	727.5107299685478	2	727.504952	1452.99535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.92	1	107.09	106.59	107.59	0.16174								0	0	0	0.63775	1	45829	45829		0	0	1		+		15944	9733	7435	7469	18744	18744					0.2869737294681727
KRRKQWPLGW	10	Unmodified	_KRRKQWPLGW_					0	0	0			REV__ENST00000482172.5_1_13:21205203-21245170:+|nuORF	REV__ENST00000482172.5_1_13:21205203-21245170:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	677.3976928591728	2	677.89638	1353.77821	2.502	0.0016961	2.6672	0.0018081	5.1692	0.0035042	677.8984891900409	85.832	0.18663	86.084	85.943	86.13	0.25227					9	5	2	0	0	0	0.1256	1	35888	35888		0.45834	0.45834	1	1054200	+		15945	13370	7436	7470	18745	18745					0.1154697767340167
KRRKREPPRAK	11	Unmodified	_KRRKREPPRAK_					0	0	0		ENST00000480912.5_1_6:31847863-31860642:-|nuORF;nc|ENSG00000204371|Q96KQ7-2|EHMT2;ENSG00000204371|ENST00000375537|EHMT2;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|4|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|3|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|1|intron;ENSG00000204371.11,EHMT2,chr6,-,I1.1,31897223,31897635|102|15.78|2|intron	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	ENST00000480912.5_1_6:31847863-31860642:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	356.2800781130791	4	356.22856	1420.88513	-0.80413	-0.00028645	0.017228	6.137E-06	-0.7869	-0.00028032	356.2275273722933	58.701	0.16169	58.701	58.59	58.752	0					6	4	2	0	0	0	0.14606	1	24447	24447		0.094841	0	1	266710			15946	5137	7437	7471	18746	18746					0.19152527887786164
KRRKVSKR	8	Unmodified	_KRRKVSKR_					0	0	0		ENST00000519204.5_1_5:167690101-167690218:+|nuORF	ENST00000519204.5_1_5:167690101-167690218:+|nuORF	ENST00000519204.5_1_5:167690101-167690218:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3593627810478	2	529.356891	1056.69923	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.82	1	86.072	85.572	86.572	0.25227								0	0	0	1.0178	1	35885	35885		0.69038	0	1				15947	7067	7438	7472	18747	18747					0.1731475043914088
KRRLPRLRHA	10	Unmodified	_KRRLPRLRHA_					0	0	0			REV__ENST00000432183.5_1_2:46770253-46803244:+|nuORF	REV__ENST00000432183.5_1_2:46770253-46803244:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.9497863650322	3	434.949573	1301.82689	3.0945	0.001346	-2.3933	-0.001041	0.70118	0.00030498	434.9484506115308	94.287	0.56651	94.432	94.165	94.731	0.14493					44	17	4	0	0	0	0.89803	1	39456	39456		0.69767	0.07084	1	9195900	+		15948	13033	7439	7473	18748	18748					0.18804891033164495
KRRPFHLTRL	10	Unmodified	_KRRPFHLTRL_					0	0	0			REV__ENST00000590578.5_1_19:44669911-44674228:+|nuORF	REV__ENST00000590578.5_1_19:44669911-44674228:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7071105837822	4	331.708466	1322.80476	-1.6841	-0.00055862	-2.1186	-0.00070276	-3.8027	-0.0012614	331.7077939016305	45.636	0.79131	45.636	45.312	46.103	0					46	24	2	0	0	0	0.88508	1	19165	19165		3.0723	0.44103	1	4433400	+		15949	14068	7440	7474	18749	18749					0.1562666656473084
KRRPKRREIPL	11	Unmodified	_KRRPKRREIPL_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9872619509697	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.0391	1	14454	14454		0.40827	0	1	399160000			15950	517	7441	7475	18750	18750					0.21513985064643748
KRRRFWIEFRL	11	Unmodified	_KRRRFWIEFRL_					0	0	0			REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1804382205009	4	402.491485	1605.93683	1.8813	0.00075722	1.9712	0.00079338	3.8525	0.0015506	402.74273630772393	41.964	0.4559	42.285	41.948	42.404	0.32058					34	14	3	0	0	0	0.14606	1	17518	17518		0.094841	0.094841	1	795030	+		15951	11618	7442	7476	18751	18751					0.15810271581676716
KRRRFWIEFRL	11	Unmodified	_KRRRFWIEFRL_					0	0	0			REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1806213259697	4	402.491485	1605.93683	1.8292	0.00073625	2.379	0.00095753	4.2083	0.0016938	402.4922598629699	40.863	0.67013	41.18	40.98	41.65	0.31683					43	22	3	0	0	0	0.14606	1	17205	17205		0	0	1	1121700	+		15952	11618	7442	7476	18752	18752					0.15810271581676716
KRRRFWIEFRL	11	Unmodified	_KRRRFWIEFRL_					0	0	0			REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1801025271416	4	402.491485	1605.93683	1.9166	0.00077141	1.944	0.00078243	3.8605	0.0015538	402.4926771989371	40.113	0.45934	41.423	41.055	41.514	1.3102					20	14	2	0	0	0	0.14606	1	16796	16796		0	0	1	978890	+		15953	11618	7442	7476	18753	18753					0.15810271581676716
KRRRFWIEFRL	11	Unmodified	_KRRRFWIEFRL_					0	0	0			REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1800720095634	4	402.491485	1605.93683	1.0993	0.00044245	2.4228	0.00097517	3.5221	0.0014176	402.4926050591752	38.656	0.60938	40.493	40.304	40.913	1.8366					29	18	3	0	0	0	0.14606	1	16171	16171		0	0	1	1495200	+		15954	11618	7442	7476	18754	18754					0.15810271581676716
KRRRFWIEFRL	11	Unmodified	_KRRRFWIEFRL_					0	0	0			REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	REV__ENST00000563969.5_1_16:67314567-67322708:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	402.491485	1605.93683	1.8906	0.00076094	2.3551	0.00094793	4.2457	0.0017089	402.4924205381075	39.214	0.54313	40.51	40.319	40.863	1.2961	0.0087469	-5.869E-05	NaN	0	31	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1245400	+		15955	11618	7442	7476							0.15810271581676716
KRRRKAAPLP	10	Unmodified	_KRRRKAAPLP_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8929321169853	2	596.891098	1191.76764	3.1997	0.0019099	-0.65998	-0.00039394	2.5398	0.001516	596.8907943390383	105.96	0.17896	106.12	106.02	106.2	0.1586					31	8	5	0	0	0	0.89803	2	45226	45226;45290		0.45834	0.45834	1	557360000			15956	1170	7443	7477	18755;18756	18755					0.1794299501898422
KRRRKAAPLP	10	Unmodified	_KRRRKAAPLP_					0	0	0		ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	ENSG00000092978|ENST00000366935|GPATCH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8931152224541	2	596.891098	1191.76764	3.2975	0.0019682	-0.15271	-9.1153E-05	3.1448	0.0018771	596.8909115527888	107.4	0.20821	107.55	107.45	107.66	0.15796					33	10	4	0	0	0	0.89803	1	46114	46114		0.45834	0.10771	1	286970000			15957	1170	7443	7477	18757	18757					0.1794299501898422
KRRRMKKKKKM	11	Unmodified	_KRRRMKKKKKM_					0	0	0		ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5377380251884	5	304.400205	1516.96465	-0.083289	-2.5353E-05	2.3636	0.00071947	2.2803	0.00069411	304.4007114428177	24.459	0.99696	26.143	25.906	26.903	1.6845					107	33	4	0	0	0	0.14606	1	10178	10178		0.08335	0.08335	1	7304600			15958	5558	7444	7478	18758	18758					0.22684135245890502
KRRRMKKKKKM	11	Unmodified	_KRRRMKKKKKM_					0	0	0		ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.6956054568291	5	304.400205	1516.96465	0.92755	0.00028235	-2.3192	-0.00070596	-1.3916	-0.00042361	304.39969535425087	50.047	0.42825	52.024	51.851	52.279	1.9772					21	13	2	0	0	0	0.14606	1	21070	21070		0.08335	0.08335	1	898160			15959	5558	7444	7478	18759	18759					0.22684135245890502
KRRRQRLTRRP	11	Unmodified	_KRRRQRLTRRP_					0	0	0			REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	306.0764343142509	5	305.398332	1521.95528	0.51194	0.00015635	1.0843	0.00033115	1.5963	0.00048749	305.3985827178919	31.481	0.67043	31.772	31.418	32.088	0.29086					38	21	3	0	0	0	0.14606	1	13113	13113		0	0	1	503230	+		15960	12592	7445	7479	18760	18760					0.21517826276249252
KRRRQRLTRRP	11	Unmodified	_KRRRQRLTRRP_					0	0	0			REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	306.0762206912041	5	305.398332	1521.95528	-0.43073	-0.00013154	1.2348	0.00037709	0.80403	0.00024555	305.5992687986206	30.182	0.49117	31.464	31.134	31.626	1.2825					33	15	3	0	0	0	0.14606	1	12613	12613		0.094841	0.094841	1	833880	+		15961	12592	7445	7479	18761	18761					0.21517826276249252
KRRRQRLTRRP	11	Unmodified	_KRRRQRLTRRP_					0	0	0			REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	REV__ENST00000360342.7_1_20:3148478-3154166:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	306.0757629275322	5	305.398332	1521.95528	0.11809	3.6065E-05	-0.28182	-8.6066E-05	-0.16372	-5.0001E-05	305.39834284384995	29.62	0.42582	31.418	31.234	31.66	1.7987					26	13	3	0	0	0	0.14606	1	12383	12383		0.094841	0.094841	1	749040	+		15962	12592	7445	7479	18762	18762					0.21517826276249252
KRRRRRKKIAK	11	Unmodified	_KRRRRRKKIAK_					0	0	0			REV__ENSG00000164626|ENST00000359534|KCNK5	REV__ENSG00000164626|ENST00000359534|KCNK5	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3487426638603	3	499.346326	1495.01715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.71	1	96.815	96.315	97.315	0.105								0	0	0	0.63775	1	40470	40470		0	0	1		+		15963	10741	7446	7480	18763	18763					0.2894417769539359
KRRRWWLLLL	10	Unmodified	_KRRRWWLLLL_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	481.1773559451103	3	480.641857	1438.90374	3.1452	0.0015117	-1.8903	-0.00090857	1.2548	0.00060313	480.64079857854654	107.17	0.18134	107.33	107.21	107.4	0.16174					19	8	3	0	0	0	0.12561	1	45922	45922		0.13989	0	1	15975000	+		15964	9593	7447	7481	18764	18764					0.20184689529651223
KRRRWWLLLL	10	Unmodified	_KRRRWWLLLL_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	480.641857	1438.90374	1.4638	0.00070357	-1.3488	-0.0006483	0.115	5.5273E-05	480.64190121982637	107.22	0.094475	107.22	107.15	107.24	0	-0.067946	0.00049493	NaN	0.13989	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6924300	+		15965	9593	7447	7481							0.20184689529651223
KRRRWWLLLL	10	Unmodified	_KRRRWWLLLL_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	480.641857	1438.90374	3.2555	0.0015647	-1.6313	-0.00078409	1.6242	0.00078065	480.64121774223776	107.17	0.18028	107.33	107.23	107.41	0.15781	0.033491	8.7546E-05	NaN	0.13989	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18107000	+		15966	9593	7447	7481							0.20184689529651223
KRRSQVIHI	9	Unmodified	_KRRSQVIHI_					0	0	0			REV__nc|ENSG00000180336|A2RUB1-2|MEIOC	REV__nc|ENSG00000180336|A2RUB1-2|MEIOC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5714904665947	3	379.57188	1135.69381	1.021	0.00038753	-1.0449	-0.00039663	-0.02397	-9.0982E-06	379.5711961313938	77.468	0.80406	79.219	78.818	79.622	1.7514					36	25	2	0	0	0	0.847	1	32353	32353		0.96228	0	1	1196200	+		15967	11294	7448	7482	18765	18765					0.1313902685665198
KRRSRPKPRE	10	Unmodified	_KRRSRPKPRE_					0	0	0			REV__ENSG00000119919|ENST00000344586|NKX2-3	REV__ENSG00000119919|ENST00000344586|NKX2-3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2675659060478	3	437.268971	1308.78508	2.038	0.00089113	-2.1873	-0.00095644	-0.14936	-6.531E-05	437.26777768687555	39.19	0.81233	39.499	38.919	39.731	0.30857					68	26	3	0	0	0	0.89803	1	16328	16328		0.62683	0.12087	1	2674100	+		15968	9558	7449	7483	18766	18766					0.1430429055399145
KRRWKKNFI	9	Unmodified	_KRRWKKNFI_					0	0	0		ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	ENSG00000101306|ENST00000375985|MYLK2	MSMS	GG20161007_CRH_Patient100_A02_01	1	425.9309265017509	3	425.931408	1274.77239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.19909	1	0.19909	-0.30091	0.69909	0								0	0	0	0.42693	1	81	81		0.23584	0.076522	1				15969	1334	7450	7484	18767	18767					0.1459987916175578
KRRYAREK	8	Unmodified	_KRRYAREK_					0	0	0		tr|A0A7D6ZIJ2|A0A7D6ZIJ2_9CLOTAdenosylcobinamide-GDPribazoletransferaseOS=ClostridiumintestinaleOX=36845GN=cobSPE=3SV=1	tr|A0A7D6ZIJ2|A0A7D6ZIJ2_9CLOTAdenosylcobinamide-GDPribazoletransferaseOS=ClostridiumintestinaleOX=36845GN=cobSPE=3SV=1	tr|A0A7D6ZIJ2|A0A7D6ZIJ2_9CLOTAdenosylcobinamide-GDPribazoletransferaseOS=ClostridiumintestinaleOX=36845GN=cobSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8311645388603	2	553.830706	1105.64686	1.3705	0.00075904	-0.06465	-3.5805E-05	1.3059	0.00072324	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	0.89051	1	31054	31054		2.3027	0	1	2354100			15970	17103	7451	7485	18768	18768					0.09826167305504896
KRSSRSVEDDK	11	Unmodified	_KRSSRSVEDDK_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;ENST00000454830.6_1_15:74914310-74922221:+|nuORF;ENST00000569406.5_1_15:74914310-74914640:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	653.8413574099541	2	653.839122	1305.66369	1.7601	0.0011508	1.842	0.0012044	3.6021	0.0023552	653.8404394287032	41.805	0.31731	43.698	43.541	43.859	1.8927					22	9	3	0	0	0	0.97491	1	17561	17561		5.2969	1.7004	1	2443300			15971	4510	7452	7486	18769	18769					0.023085786101319172
KRSVPQVQ	8	Unmodified	_KRSVPQVQ_					0	0	0			REV__ENSG00000157456|ENST00000288207|CCNB2	REV__ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2816650271416	2	471.279983	940.545414	2.3389	0.0011023	0.43598	0.00020547	2.7749	0.0013078	471.28034591700657	75.986	1.1523	75.986	75.471	76.623	0					58	36	3	0	0	0	0.89124	2	31629	31629;31680		1.8442	0	1	1465200	+		15972	10539	7453	7487	18770;18771	18770					0.07276295882957129
KRTAKGSR	8	Unmodified	_KRTAKGSR_					0	0	0			REV__ENSG00000254585|ENST00000650528|MAGEL2	REV__ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2777892947197	2	452.277775	902.540997	1.8084	0.00081792	0.049806	2.2526E-05	1.8583	0.00084045	452.27761063232845	74.913	0.4391	74.913	74.683	75.122	0					42	13	4	0	0	0	0.89051	1	31143	31143		2.3027	0	1	10858000	+		15973	11964	7454	7488	18772	18772					0.08582831460046236
KRTAKGSR	8	Unmodified	_KRTAKGSR_					0	0	0			REV__ENSG00000254585|ENST00000650528|MAGEL2	REV__ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.277775	902.540997	3.7217	0.0016832	-1.2425	-0.00056197	2.4792	0.0011213	452.2773123205596	73.886	0.40787	75.204	74.966	75.374	1.318	0.084161	-0.0004324	NaN	2.3027	33	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7878500	+		15974	11964	7454	7488							0.08582831460046236
KRTAKGSR	8	Unmodified	_KRTAKGSR_					0	0	0			REV__ENSG00000254585|ENST00000650528|MAGEL2	REV__ENSG00000254585|ENST00000650528|MAGEL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	452.277775	902.540997	2.939	0.0013292	-0.56958	-0.00025761	2.3694	0.0010716	452.2776776335741	73.53	0.52975	75.326	75.006	75.536	1.7962	0.20612	0.00017632	NaN	2.3027	47	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4553900	+		15975	11964	7454	7488							0.08582831460046236
KRTRSPDNRYF	11	Unmodified	_KRTRSPDNRYF_					0	0	0			REV__tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	REV__tr|A0A553STE8|A0A553STE8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_04640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	720.4381591677666	2	720.378749	1438.74294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.85	1	105.01	104.51	105.51	0.15859								0	0	0	0.63775	1	44529	44529		1.4819	0.15237	1		+		15976	15238	7455	7489	18773	18773					0.04112270354926295
KRTYHWHRSLD	11	Unmodified	_KRTYHWHRSLD_					0	0	0		ENST00000575034.5_1_17:78328973-78388844:-|nuORF	ENST00000575034.5_1_17:78328973-78388844:-|nuORF	ENST00000575034.5_1_17:78328973-78388844:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2593871951103	3	500.260253	1497.75893	-0.055151	-2.759E-05	-2.4737	-0.0012375	-2.5289	-0.0012651	500.2587946826034	13.642	0.23036	14.47	14.317	14.548	0.82789					11	7	2	0	0	0	1.0391	1	5661	5661		0.40827	0	1	998900			15977	7407	7456	7490	18774	18774					0.02995976591842009
KRVLRKKYQIY	11	Unmodified	_KRVLRKKYQIY_					0	0	0		ENST00000526813.1_1_11:117059296-117060153:+|nuORF;SIDT2|p.A704Vfs*9|1|0.03|ENSG00000149577|chr11:117193158-117193159|CC/-|frameshift_variant;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.2202941775322	4	374.48714	1493.91945	0.34348	0.00012863	1.9561	0.00073253	2.2996	0.00086116	374.4878881072304	25.944	1.1487	27.203	26.863	28.012	1.2594					82	36	3	0	0	0	0.14606	1	11048	11048		0.40827	0.31342	1	1635200			15978	3247	7457	7491	18775	18775					0.19224931256053424
KRVLRKKYQIY	11	Unmodified	_KRVLRKKYQIY_					0	0	0		ENST00000526813.1_1_11:117059296-117060153:+|nuORF;SIDT2|p.A704Vfs*9|1|0.03|ENSG00000149577|chr11:117193158-117193159|CC/-|frameshift_variant;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	374.48714	1493.91945	0.83839	0.00031397	1.9869	0.00074406	2.8253	0.001058	374.7385155275511	27.292	0.89748	27.563	27.058	27.956	0.27119	0.22059	0.00050425	NaN	0.40827	73	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1202900			15979	3247	7457	7491							0.19224931256053424
KRVLRKKYQIY	11	Unmodified	_KRVLRKKYQIY_					0	0	0		ENST00000526813.1_1_11:117059296-117060153:+|nuORF;SIDT2|p.A704Vfs*9|1|0.03|ENSG00000149577|chr11:117193158-117193159|CC/-|frameshift_variant;ENSG00000149577|ENST00000324225|SIDT2;nc|ENSG00000149577|Q8NBJ9-2|SIDT2	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	ENST00000526813.1_1_11:117059296-117060153:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	374.48714	1493.91945	0.3371	0.00012624	1.0176	0.00038106	1.3547	0.00050731	374.4875755166918	25.545	0.46098	27.262	26.966	27.427	1.7167	-0.08088	-0.00094775	NaN	0.40827	39	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2355800			15980	3247	7457	7491							0.19224931256053424
KRVPILPFVI	10	Unmodified	_KRVPILPFVI_					0	0	0		ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.9319946169853	3	394.597143	1180.7696	0.29617	0.00011687	2.4468	0.00096548	2.7429	0.0010824	394.5980034016669	29.978	0.30586	31.261	31.072	31.378	1.2825					18	9	3	0	0	0	0.87762	1	12579	12579		3.8763	2.1341	1	1447400			15981	5350	7458	7492	18776	18776					0.18644610984233623
KRVPILPFVI	10	Unmodified	_KRVPILPFVI_					0	0	0		ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	394.597143	1180.7696	1.2383	0.00048863	1.0914	0.00043065	2.3297	0.00091928	394.9317757500931	31.289	0.33525	31.58	31.449	31.785	0.29086	0.1962	-0.00041338	NaN	3.8763	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1038000			15982	5350	7458	7492							0.18644610984233623
KRVPILPFVI	10	Unmodified	_KRVPILPFVI_					0	0	0		ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	ENSG00000242950|ENST00000603053|ERVW-1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	394.597143	1180.7696	0.6207	0.00024493	0.85697	0.00033816	1.4777	0.00058308	394.597551188823	29.512	0.21182	31.31	31.234	31.446	1.7987	-0.07323	-0.00069085	NaN	3.8763	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1220500			15983	5350	7458	7492							0.18644610984233623
KRVQVILP	8	Unmodified	_KRVQVILP_					0	0	0		ENST00000478966.1_1_2:224840586-224849719:-|nuORF;ENSG00000135919|ENST00000409304|SERPINE2;nc|ENSG00000135919|P07093|SERPINE2;nc|ENSG00000135919|P07093-3|SERPINE2	ENST00000478966.1_1_2:224840586-224849719:-|nuORF	ENST00000478966.1_1_2:224840586-224849719:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.8810912966728	3	318.214922	951.622936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.635	1	34.909	34.409	35.409	1.2746								0	0	0	1.0178	1	14111	14111		3.2813	0	1				15984	2692	7459	7493	18777	18777					0.14518933819135782
KRVWSEMC	8	Unmodified	_KRVWSEMC_					0	0	0		ENST00000449707.5_1_2:219502991-219503057:-|nuORF	ENST00000449707.5_1_2:219502991-219503057:-|nuORF	ENST00000449707.5_1_2:219502991-219503057:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	346.0958434939384	3	346.833495	1037.47866	1.4826	0.00051423	0.38559	0.00013374	1.8682	0.00064796	346.8335276520477	78.736	0.65373	80.003	79.724	80.378	1.2668					29	20	2	0	0	0	2.3239	1	33203	33203		0.45834	0	1	629200			15985	6600	7460	7494	18778	18778					-0.038583989948165254
KRVWSEMC	8	Unmodified	_KRVWSEMC_					0	0	0		ENST00000449707.5_1_2:219502991-219503057:-|nuORF	ENST00000449707.5_1_2:219502991-219503057:-|nuORF	ENST00000449707.5_1_2:219502991-219503057:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	346.0954467654228	3	346.833495	1037.47866	1.5517	0.00053818	0.49822	0.0001728	2.0499	0.00071097	347.1679678608273	78.294	0.58935	80.029	79.699	80.289	1.735					35	18	3	0	0	0	2.3239	1	32916	32916		0.45834	0	1	360400			15986	6600	7460	7494	18779	18779					-0.038583989948165254
KRWKCGYIKK	10	Unmodified	_KRWKCGYIKK_					0	0	0		tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3848144412041	2	655.381717	1308.74888	2.4462	0.0016032	2.3253	0.001524	4.7716	0.0031272	655.3831939391242	80.806	0.55811	82.502	82.333	82.892	1.6959					22	17	2	0	0	0	0.89803	1	33913	33913		1.4819	0.15237	1	795810			15987	16811	7461	7495	18780	18780					0.10685697332883137
KRWKCGYIKK	10	Unmodified	_KRWKCGYIKK_					0	0	0		tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	tr|A0A7D6VQX8|A0A7D6VQX8_9CLOTCobyrinatea,c-diamidesynthaseOS=ClostridiumintestinaleOX=36845GN=cbiAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	655.381717	1308.74888	2.9493	0.0019329	2.2004	0.0014421	5.1497	0.003375	655.3823046570045	81.17	0.55431	82.404	82.102	82.656	1.2332	0.068075	0.00105	NaN	1.4819	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570090			15988	16811	7461	7495							0.10685697332883137
KRWQRAYA	8	Unmodified	_KRWQRAYA_					0	0	0		CDC42BPB|p.G1113R|1|0.05|ENSG00000198752|chr14:102949877-102949877|C/T|missense_variant	CDC42BPB|p.G1113R|1|0.05|ENSG00000198752|chr14:102949877-102949877|C/T|missense_variant	CDC42BPB|p.G1113R|1|0.05|ENSG00000198752|chr14:102949877-102949877|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2021972537041	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.52395	1	1.1913	0.69134	1.6913	0.66738								0	0	0	1.0178	1	214	214		0.45834	0	1				15989	134	7462	7496	18781	18781					0.047508068684237514
KRWVKHHRLLF	11	Unmodified	_KRWVKHHRLLF_					0	0	0			REV__ENSG00000124140|ENST00000243964|SLC12A5	REV__ENSG00000124140|ENST00000243964|SLC12A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.6466857790947	3	507.308878	1518.90481	4.5278	0.002297	2.1927	0.0011124	6.7205	0.0034094	507.31003610671627	89.629	1.0677	91.033	90.392	91.46	1.4045					73	33	4	0	0	0	1.0402	1	37798	37798		0.094841	0	1	1450400	+		15990	9632	7463	7497	18782	18782					0.16610903898549623
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.9980346560478	4	398.998471	1591.96478	0.13997	5.5847E-05	-0.025921	-1.0343E-05	0.11405	4.5505E-05	399.2495388158196	40.607	0.75429	40.607	40.073	40.827	0					62	23	5	0	0	0	1.0402	3	17044	16948;16999;17044		0.08335	0.08335	1	8103300			15991	2157	7464	7498	18783;18784;18785	18785					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508117556572	4	398.998471	1591.96478	1.7105	0.00068249	-1.3998	-0.00055851	0.31072	0.00012398	399.24890552624345	39.39	1.1783	39.702	38.808	39.986	0.31262					51	38	2	0	0	0	1.0405	5	16391	16391;16508;16555;16604;16661		0	0	1	4676400			15992	2157	7464	7498	18786;18787;18788;18789;18790	18786					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2492553591728	4	398.998471	1591.96478	1.7519	0.00069899	-1.7142	-0.00068396	0.037665	1.5028E-05	399.2488891130866	40.04	1.116	40.352	39.892	41.008	0.31263					91	35	4	0	0	0	1.0405	7	16708	16708;16756;16807;16859;16915;16963;17030		0	0	1	4332400			15993	2157	7464	7498	18791;18792;18793;18794;18795;18796;18797	18791					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2505981326103	4	398.998471	1591.96478	1.8203	0.0007263	-1.6968	-0.00067703	0.12349	4.927E-05	399.24885974635345	41.262	1.4665	41.579	41.012	42.479	0.31683					157	49	4	0	0	0	1.0405	9	17112	17112;17164;17209;17249;17298;17338;17379;17420;17469		0	0	1	6075300			15994	2157	7464	7498	18798;18799;18800;18801;18802;18803;18804;18805;18806	18798					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2503234744072	4	398.998471	1591.96478	1.8626	0.00074316	-0.57668	-0.00023009	1.2859	0.00051307	399.2494755338625	43.558	2.0343	43.882	42.946	44.98	0.32389					144	66	4	0	0	0	1.0405	6	18045	18045;18115;18161;18203;18255;18321		0	0	1	4712800			15995	2157	7464	7498	18807;18808;18809;18810;18811;18812	18807					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2494079470634	4	398.998471	1591.96478	0.43816	0.00017482	-0.75262	-0.00030029	-0.31446	-0.00012547	399.24934915728375	37.583	0.41521	38.867	38.781	39.196	1.284					37	14	4	0	0	0	1.0402	2	15877	15754;15877		0.08335	0.08335	1	11842000			15996	2157	7464	7498	18813;18814	18814					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2493774294853	4	398.998471	1591.96478	0.7352	0.00029334	-1.5477	-0.00061752	-0.81247	-0.00032417	399.2487716913642	38.005	0.34997	39.289	39.113	39.462	1.284					35	12	4	0	0	0	1.0405	2	15921	15921;15967		0	0	1	8994100			15997	2157	7464	7498	18815;18816	18815					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2499572634697	4	398.998471	1591.96478	1.0759	0.00042928	-2.5598	-0.0010214	-1.484	-0.00059209	399.2483971255735	38.328	0.68772	39.624	39.413	40.101	1.2961					51	22	3	0	0	0	1.0405	4	16008	16008;16063;16109;16176		0	0	1	3971500			15998	2157	7464	7498	18817;18818;18819;18820	18817					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2492553591728	4	398.998471	1591.96478	1.8422	0.00073505	-2.5239	-0.001007	-0.68164	-0.00027197	399.24846701773976	39.427	0.96672	40.727	40.2	41.166	1.2993					91	31	4	0	0	0	1.0402	7	16399	16399;16447;16486;16529;16570;16620;16667		0.08335	0.08335	1	7698700			15999	2157	7464	7498	18821;18822;18823;18824;18825;18826;18827	18821					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.9974853396416	4	398.998471	1591.96478	1.5509	0.00061882	-1.702	-0.0006791	-0.15109	-6.0283E-05	399.2487715907972	41.936	1.5066	43.276	42.633	44.14	1.3399					110	47	4	0	0	0	1.0405	2	17536	17536;17653		0	0	1	3344000			16000	2157	7464	7498	18828;18829	18828					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2482482790947	4	398.998471	1591.96478	0.60703	0.0002422	-1.358	-0.00054185	-0.75101	-0.00029965	399.2489553803366	37.161	0.63813	38.981	38.645	39.283	1.8202					70	30	3	0	0	0	1.0405	2	15507	15507;15702		0	0	1	4767200			16001	2157	7464	7498	18830;18831	18830					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2480651736259	4	398.998471	1591.96478	0.64177	0.00025606	-1.4267	-0.00056927	-0.78497	-0.0003132	399.249026890886	37.701	0.69114	39.521	39.283	39.974	1.8202					42	22	2	0	0	0	1.0405	3	15751	15751;15796;15850		0	0	1	8648500			16002	2157	7464	7498	18832;18833;18834	18832					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2491332888603	4	398.998471	1591.96478	1.1882	0.00047411	-1.6762	-0.00066882	-0.48799	-0.00019471	399.2488584767154	38.874	1.3537	40.71	39.99	41.344	1.8366					115	42	4	0	0	0	1.0402	7	16225	16124;16176;16225;16277;16327;16365;16414		0.094841	0.094841	1	5612700			16003	2157	7464	7498	18835;18836;18837;18838;18839;18840;18841	18837					0.19247594561761616
KRYQVKFRRRR	11	Unmodified	_KRYQVKFRRRR_					0	0	0		ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502014040947	4	398.998471	1591.96478	1.7198	0.0006862	-1.45	-0.00057857	0.26977	0.00010764	399.24896936818476	41.346	1.5258	43.239	42.61	44.136	1.8927					122	48	4	0	0	0	1.0405	5	17311	17311;17368;17415;17455;17599		0	0	1	4654600			16004	2157	7464	7498	18842;18843;18844;18845;18846	18842					0.19247594561761616
KRYSIKKRR	9	Unmodified	_KRYSIKKRR_					0	0	0			REV__ENST00000395183.6_1_4:86699881-86700061:+|nuORF	REV__ENST00000395183.6_1_4:86699881-86700061:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2690917849541	3	412.266679	1233.77821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.09	1	104.15	103.65	104.65	0.059502								0	0	0	0.42693	1	43830	43830		1.0715	0.3738	1		+		16005	12836	7465	7499	18847	18847					0.17066977673403017
KRYWKHLSET	10	Unmodified	_KRYWKHLSET_					0	0	0		tr|A0A7D6ZWW9|A0A7D6ZWW9_9CLOTTIGR03915familyputativeDNArepairproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19665PE=4SV=1	tr|A0A7D6ZWW9|A0A7D6ZWW9_9CLOTTIGR03915familyputativeDNArepairproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19665PE=4SV=1	tr|A0A7D6ZWW9|A0A7D6ZWW9_9CLOTTIGR03915familyputativeDNArepairproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19665PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9119445681572	3	449.910449	1346.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4077	1	4.0313	3.5313	4.5313	0.62362								0	0	0	0.66254	1	1407	1407		0.15932	0	1				16006	17180	7466	7500	18848	18848					0.050032685830274204
KRYYKYIYFYE	11	Unmodified	_KRYYKYIYFYE_					0	0	0			REV__tr|A0A7D7A2D7|A0A7D7A2D7_9CLOTHDIGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16435PE=4SV=1	REV__tr|A0A7D7A2D7|A0A7D7A2D7_9CLOTHDIGdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16435PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	818.4140502810478	2	818.413934	1634.81332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.5	1	115.68	115.18	116.18	0.18399								0	0	0	0.63775	1	50011	50011		0	0	1		+		16007	15849	7467	7501	18849	18849					0.021301309000136825
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.7740356326103	2	445.774534	889.534515	1.4599	0.00065077	-0.79163	-0.00035289	0.66824	0.00029788	445.774156130056	95.335	0.45902	95.335	95.109	95.568	0					47	15	4	0	0	0	0.88587	2	39810	39810;39859		5.2307	0	1	24368000			16008	7615	7468	7502	18850;18851	18850					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.7755615115166	2	445.774534	889.534515	3.2008	0.0014269	-1.4411	-0.00064242	1.7597	0.00078443	445.77390744455687	94.849	0.52981	94.973	94.71	95.239	0.12331					51	16	4	0	0	0	0.88587	3	39693	39650;39693;39735		5.2307	0	1	22539000			16009	7615	7468	7502	18852;18853;18854	18853					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	890.5424682497978	1	890.541791	889.534515	4.0074	0.0035688	-0.48066	-0.00042805	3.5268	0.0031407	890.5404198371245	94.026	0.34474	94.767	94.574	94.919	0.74124					15	10	2	0	0	0	0.88587	2	39537	39537;39587		5.2307	0	1	2023200			16010	7615	7468	7502	18855;18856	18855					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.7757751345634	2	445.774534	889.534515	4.8156	0.0021467	-3.0501	-0.0013596	1.7655	0.00078702	445.7731984243468	87.631	0.44545	89.126	88.919	89.364	1.4953					37	13	4	0	0	0	0.89051	2	36956	36956;37001		2.3027	0	1	10122000			16011	7615	7468	7502	18857;18858	18857					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	890.5483276247978	1	890.541791	889.534515	4.532	0.0040359	-2.1691	-0.0019317	2.3628	0.0021042	890.5394898306824	87.622	0.28577	89.117	88.983	89.269	1.4953					13	8	2	0	0	0	0.88587	1	36992	36992		5.2307	0	1	1155700			16012	7615	7468	7502	18859	18859					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	890.5411865115166	1	890.541791	889.534515	3.124	0.002782	-2.1094	-0.0018785	1.0146	0.00090354	890.5393500293691	93.535	0.34085	94.812	94.61	94.951	1.277					16	10	2	0	0	0	0.88587	1	39360	39360		5.2307	0	1	2715500			16013	7615	7468	7502	18860	18860					0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	890.541791	889.534515	2.2863	0.002036	-4.5935	-0.0040907	-2.3072	-0.0020547	890.5389796309577	89.5	0.18765	89.5	89.4	89.588	0	0.23999	-0.0010008	NaN	5.2307	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525390			16014	7615	7468	7502							0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	890.541791	889.534515	2.6712	0.0023788	-3.2591	-0.0029023	-0.58785	-0.0005235	890.5397334203628	88.99	0.29192	89.213	89.068	89.36	0.22359	-0.047036	0.0001875	NaN	5.2307	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	575660			16015	7615	7468	7502							0.08532893508663619
KSAKKKNS	8	Unmodified	_KSAKKKNS_					0	0	0		HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	890.541791	889.534515	5.2006	0.0046313	-6.8011	-0.0060567	-1.6006	-0.0014254	890.532104693691	88.154	0.12759	89.21	89.144	89.272	1.0562	-0.050076	-0.0029669	NaN	5.2307	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	733430			16016	7615	7468	7502							0.08532893508663619
KSAYNCYRCK	10	Unmodified	_KSAYNCYRCK_					0	0	0			REV__ENSG00000095574|ENST00000368886|IKZF5	REV__ENSG00000095574|ENST00000368886|IKZF5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	412.2480956912041	3	412.526842	1234.5587	1.1819	0.00048755	-0.80053	-0.00033024	0.38134	0.00015731	412.5266715901367	48.546	0.36708	49.934	49.681	50.048	1.388					45	11	6	0	0	0	0.12547	1	20255	20255		0.69767	0.46182	1	6333400	+		16017	8928	7469	7503	18861	18861					-0.049199573916439476
KSAYNCYRCK	10	Unmodified	_KSAYNCYRCK_					0	0	0			REV__ENSG00000095574|ENST00000368886|IKZF5	REV__ENSG00000095574|ENST00000368886|IKZF5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	412.526842	1234.5587	2.2579	0.00093145	-1.2494	-0.00051543	1.0085	0.00041601	412.5263590168238	47.998	0.27748	49.975	49.837	50.114	1.9772	0.020211	-0.00023456	NaN	0.69767	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5053100	+		16018	8928	7469	7503							-0.049199573916439476
KSCVKIKF	8	Unmodified	_KSCVKIKF_					0	0	0			REV__ENST00000216044.9_1_22:39128202-39128355:+|nuORF	REV__ENST00000216044.9_1_22:39128202-39128355:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1910583376884	3	318.193129	951.557558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.195	1	84.195	83.695	84.695	0								0	0	0	1.0178	1	35087	35087		1.4819	0.41044	1		+		16019	12064	7470	7504	18862	18862					0.07984196301777047
KSCVKIKF	8	Unmodified	_KSCVKIKF_					0	0	0			REV__ENST00000216044.9_1_22:39128202-39128355:+|nuORF	REV__ENST00000216044.9_1_22:39128202-39128355:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1914855837822	3	318.193129	951.557558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.97	1	88.97	88.47	89.47	0								0	0	0	1.0178	1	37193	37193		1.4819	1.0236	1		+		16020	12064	7470	7504	18863	18863					0.07984196301777047
KSDISIIFWHE	11	Unmodified	_KSDISIIFWHE_					0	0	0			REV__tr|A0A553SSD4|A0A553SSD4_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02895PE=4SV=1	REV__tr|A0A553SSD4|A0A553SSD4_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02895PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	687.8534423708916	2	687.856252	1373.69795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.216	1	57.185	56.685	57.685	1.9684								0	0	0	0.63771	1	23152	23152		10.8	1.4164	1		+		16021	15201	7471	7505	18864	18864					0.02605026769037977
KSDVEAIFSK	10	Unmodified	_KSDVEAIFSK_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000528764.1_1_11:86735664-86735814:+|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3046752810478	2	562.303321	1122.59209	0.61061	0.00034335	0.66391	0.00037332	1.2745	0.00071666	562.303733109292	24.923	0.18269	26.608	26.482	26.665	1.6845					9	5	2	0	0	0	0.48678	1	10412	10412		28.181	4.1607	1	582740			16022	1161	7472	7506	18865	18865					0.035696909235639396
KSDVEAIFSK	10	Unmodified	_KSDVEAIFSK_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000528764.1_1_11:86735664-86735814:+|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	562.303321	1122.59209	1.3762	0.00077383	1.5749	0.00088556	2.9511	0.0016594	562.3038696085557	25.275	0.27272	26.535	26.376	26.649	1.2594	-0.036695	0.00070971	NaN	28.181	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455100			16023	1161	7472	7506							0.035696909235639396
KSERCVFCLF	10	Unmodified	_KSERCVFCLF_					0	0	0			REV__nc|ENSG00000204616|Q9BZY9-2|TRIM31	REV__nc|ENSG00000204616|Q9BZY9-2|TRIM31	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	411.8844482302666	3	411.203588	1230.58893	-0.51216	-0.0002106	2.9459	0.0012114	2.4338	0.0010008	411.2044753177793	17.312	0.27855	17.312	17.192	17.471	0					13	8	2	0	0	0	0.12545	1	7150	7150		1.7423	0	1	603770	+		16024	11794	7473	7507	18866	18866					-0.017135987264509822
KSFGILKDTKR	11	Unmodified	_KSFGILKDTKR_					0	0	0			REV__MLH3|p.P863Hfs*9|1|0.09|ENSG00000119684|chr14:75047068-75047069|-/ATCTCATGCACAT|frameshift_variant	REV__MLH3|p.P863Hfs*9|1|0.09|ENSG00000119684|chr14:75047068-75047069|-/ATCTCATGCACAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	646.8898803591728	2	646.887887	1291.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.227	1	14.227	13.727	14.727	0								0	0	0	0.63775	1	5901	5901		2.4985	0.65425	1		+		16025	9549	7474	7508	18867	18867					0.12701012276920665
KSFLQNPHK	9	Unmodified	_KSFLQNPHK_					0	0	0			REV__tr|A0A553SIP3|A0A553SIP3_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_15270PE=4SV=1	REV__tr|A0A553SIP3|A0A553SIP3_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_15270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	549.8044921755791	2	549.806365	1097.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.866	1	10.948	10.448	11.448	0.082325								0	0	0	0.38683	1	4508	4508		10.074	0.72649	1		+		16026	14859	7475	7509	18868	18868					0.053282539457541134
KSGIIPALI	9	Unmodified	_KSGIIPALI_					0	0	0		nc|ENSG00000075945|Q92845-4|KIFAP3;nc|ENSG00000075945|Q92845-2|KIFAP3;nc|ENSG00000075945|Q92845-3|KIFAP3;ENSG00000075945|ENST00000361580|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2119628787041	3	304.535661	910.585153	-2.9985	-0.00091314	3.3084	0.0010075	0.30995	9.439E-05	304.53765887965574	24.062	0.71211	24.062	23.779	24.491	0					36	22	2	0	0	0	0.11948	1	10029	10029		0.15932	0	1	1271100			16027	942	7476	7510	18869	18869					0.1262842283365444
KSHIYRHD	8	Unmodified	_KSHIYRHD_					0	0	0			REV__ENSG00000143867|ENST00000272223|OSR1	REV__ENSG00000143867|ENST00000272223|OSR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	353.2537719607353	3	352.517552	1054.53083	1.2202	0.00043015	1.1626	0.00040983	2.3828	0.00083997	352.51795222047053	68.414	0.21556	68.736	68.597	68.813	0.32224					11	6	2	0	0	0	2.3239	1	28649	28649		1.4819	0	1	262300	+		16028	10225	7477	7511	18870	18870					0.005742237347931223
KSIVDAKLKPP	11	Unmodified	_KSIVDAKLKPP_					0	0	0			REV__ENSG00000178295|ENST00000381254|GEN1	REV__ENSG00000178295|ENST00000381254|GEN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2523376345634	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.466	1	88.013	87.513	88.513	1.547								0	0	0	0.63775	1	36444	36444		0.50596	0	1		+		16029	11244	7478	7512	18871	18871					0.14403109016689086
KSKDFVQVM	9	Unmodified	_KSKDFVQVM_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	360.5747558474541	3	361.195198	1080.56377	0.020545	7.4208E-06	-0.51982	-0.00018776	-0.49927	-0.00018033	361.19528918697506	22.845	0.27923	24.059	23.919	24.198	1.2145					20	8	3	0	0	0	0.11512	1	9549	9549		6.1918	0	1	1786700			16030	5388	7479	7513	18872	18872					0.026706697426334358
KSKRQKKP	8	Unmodified	_KSKRQKKP_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3229553103447	2	500.324725	998.634898	1.1192	0.00055995	3.3636	0.0016829	4.4828	0.0022428	500.3257319147096	106.14	0.44993	106.14	106.03	106.48	0					44	21	5	0	0	0	0.8909	1	45283	45283		2.0598	0.40713	1	221260000			16031	3240	7480	7514	18873	18873					0.1355255056231499
KSKRQKKP	8	Unmodified	_KSKRQKKP_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3232910037041	2	500.324725	998.634898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.19	1	106.25	105.75	106.75	0.05455								0	0	0	1.0178	1	45195	45195		2.0598	0.40713	1				16032	3240	7480	7514	18874	18874					0.1355255056231499
KSKRQKKP	8	Unmodified	_KSKRQKKP_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3223449587822	2	500.324725	998.634898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.23	1	106.39	105.89	106.89	0.15781								0	0	0	1.0178	1	45446	45446		2.0598	0.40713	1				16033	3240	7480	7514	18875	18875					0.1355255056231499
KSKRSGLW	8	Unmodified	_KSKRSGLW_					0	0	0			REV__nc|ENSG00000250091|P0CZ25|DNAH10OS	REV__nc|ENSG00000250091|P0CZ25|DNAH10OS	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2854492068291	2	481.282526	960.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.029	1	89.476	88.976	89.976	1.4467								0	0	0	1.0178	1	37104	37104		0.79363	0	1		+		16034	14552	7481	7515	18876	18876					0.06864599745563282
KSKSEVKKKKK	11	Unmodified	_KSKSEVKKKKK_					0	0	0			REV__nc|ENSG00000084093|Q13127-4|REST	REV__nc|ENSG00000084093|Q13127-4|REST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	330.2205383181572	4	330.219869	1316.85037	0.63828	0.00021077	-0.23319	-7.7003E-05	0.40509	0.00013377	330.21975004901606	31.935	1.8137	32.226	31.816	33.63	0.29086					107	60	5	0	0	0	1.0402	1	13248	13248		0.094841	0	1	11081000	+		16035	8839	7482	7516	18877	18877					0.20461847236424546
KSKSEVKKKKK	11	Unmodified	_KSKSEVKKKKK_					0	0	0			REV__nc|ENSG00000084093|Q13127-4|REST	REV__nc|ENSG00000084093|Q13127-4|REST	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	330.219869	1316.85037	0.63828	0.00021077	-0.23319	-7.7003E-05	0.40509	0.00013377	330.21975004901606	31.935	1.8137	32.226	31.816	33.63	0.29086	0.11007	-0.00042481	NaN	0.094841	107	60	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11081000	+		16036	8839	7482	7516							0.20461847236424546
KSKSEVKKKKK	11	Unmodified	_KSKSEVKKKKK_					0	0	0			REV__nc|ENSG00000084093|Q13127-4|REST	REV__nc|ENSG00000084093|Q13127-4|REST	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	330.219869	1316.85037	-0.50552	-0.00016693	0.71514	0.00023615	0.20962	6.922E-05	330.22007526183444	30.724	2.0413	32.006	31.348	33.389	1.2825	-0.11007	0.00082782	NaN	0.094841	94	66	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18027000	+		16037	8839	7482	7516							0.20461847236424546
KSKTKKLGF	9	Unmodified	_KSKTKKLGF_					0	0	0		tr|A0A7D6VW08|A0A7D6VW08_9CLOTBMPfamilyABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02075PE=4SV=1	tr|A0A7D6VW08|A0A7D6VW08_9CLOTBMPfamilyABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02075PE=4SV=1	tr|A0A7D6VW08|A0A7D6VW08_9CLOTBMPfamilyABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2238342165947	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.9	1	91.882	91.382	92.382	0.98157								0	0	0	0.42693	1	38291	38291		0.26902	0	1				16038	16969	7483	7517	18878	18878					0.12766899127996112
KSKVLALT	8	Unmodified	_KSKVLALT_					0	0	0			REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2838317751884	2	430.284203	858.553853	2.3927	0.0010295	-3.5058	-0.0015085	-1.1131	-0.00047893	430.28269559589586	81.287	0.42446	81.578	81.276	81.701	0.29056					32	13	3	0	0	0	0.89198	1	33920	33920		0	0	1	2940000	+		16039	15495	7484	7518	18879	18879					0.11891849799530974
KSKVLALT	8	Unmodified	_KSKVLALT_					0	0	0			REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	REV__tr|A0A7D6VTP1|A0A7D6VTP1_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2846252322197	2	430.284203	858.553853	1.3081	0.00056286	-1.2881	-0.00055427	0.019974	8.5944E-06	430.283799627153	79.931	0.40451	81.648	81.413	81.817	1.7167					22	12	2	0	0	0	0.89198	1	33517	33517		0	0	1	1311200	+		16040	15495	7484	7518	18880	18880					0.11891849799530974
KSLIKLTT	8	Unmodified	_KSLIKLTT_					0	0	0			REV__nc|ENSG00000152942|O75943-4|RAD17	REV__nc|ENSG00000152942|O75943-4|RAD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2976867556572	2	452.29731	902.580068	2.3254	0.0010518	-2.2842	-0.0010331	0.041248	1.8656E-05	452.2962027308859	84.197	0.40369	84.197	83.996	84.399	0					26	12	3	0	0	0	0.89198	2	35066	35066;35119		0	0	1	2858000	+		16041	10436	7485	7519	18881;18882	18881					0.12488118971009499
KSLIKLTT	8	Unmodified	_KSLIKLTT_					0	0	0			REV__nc|ENSG00000152942|O75943-4|RAD17	REV__nc|ENSG00000152942|O75943-4|RAD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2975341677666	2	452.29731	902.580068	3.0031	0.0013583	-1.8121	-0.00081962	1.1909	0.00053866	452.2966218474865	84.057	0.3699	84.318	84.067	84.437	0.26083					29	11	3	0	0	0	0.89198	1	35103	35103		0	0	1	2634100	+		16042	10436	7485	7519	18883	18883					0.12488118971009499
KSLIKLTT	8	Unmodified	_KSLIKLTT_					0	0	0			REV__nc|ENSG00000152942|O75943-4|RAD17	REV__nc|ENSG00000152942|O75943-4|RAD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2976562380791	2	452.29731	902.580068	2.5498	0.0011533	-1.3348	-0.00060371	1.215	0.00054955	452.29655179057545	83.195	0.40457	84.383	84.142	84.547	1.1879					26	12	3	0	0	0	0.89198	1	34922	34922		0	0	1	1211400	+		16043	10436	7485	7519	18884	18884					0.12488118971009499
KSLLWSQGNL	10	Unmodified	_KSLLWSQGNL_					0	0	0		ETV5|p.D2Ifs*22|1|0.4|ENSG00000244405|chr3:186105853-186105865|CATAAAACCCGTC/-|frameshift_variant;ENST00000434744.5_1_3:185823467-185826254:-|nuORF;ENST00000447054.5_1_3:185823467-185882736:-|nuORF;ENST00000306376.9_1_3:185823467-185826887:-|nuORF	ETV5|p.D2Ifs*22|1|0.4|ENSG00000244405|chr3:186105853-186105865|CATAAAACCCGTC/-|frameshift_variant	ETV5|p.D2Ifs*22|1|0.4|ENSG00000244405|chr3:186105853-186105865|CATAAAACCCGTC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3233520388603	2	573.319306	1144.62406	2.5769	0.0014774	2.5984	0.0014897	5.1754	0.0029671	573.3211411284734	94.559	0.47587	94.703	94.448	94.924	0.14493					29	14	3	0	0	0	0.89803	1	39600	39600		1.1933	0.23107	1	916150			16044	5779	7486	7520	18885	18885					0.05753103397364612
KSLYAVPRPW	10	Unmodified	_KSLYAVPRPW_					0	0	0			REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|12|1|sense	REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|12|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8439208865166	2	608.84549	1215.67643	3.2441	0.0019752	-3.9966	-0.0024333	-0.7525	-0.00045816	608.8423129440764	94.001	0.31853	95.19	95.048	95.367	1.1887					18	9	3	0	0	0	0.88314	1	39550	39550		3.2813	1.2216	1	1299300	+		16045	14168	7487	7521	18886	18886					0.07721686530976513
KSNQIAPLI	9	Unmodified	_KSNQIAPLI_					0	0	0		tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.2032043337822	3	328.53432	982.581131	-1.9655	-0.00064573	3.2863	0.0010797	1.3208	0.00043393	328.53549744576213	41.387	0.7712	41.387	41.209	41.98	0					35	23	2	0	0	0	0.11901	1	17540	17540		1.0715	0	1	974380			16046	16839	7488	7522	18887	18887					0.08914333339930636
KSNSAKIYLI	10	Unmodified	_KSNSAKIYLI_					0	0	0		tr|A0A7D6VQK4|A0A7D6VQK4_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03720PE=4SV=1	tr|A0A7D6VQK4|A0A7D6VQK4_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03720PE=4SV=1	tr|A0A7D6VQK4|A0A7D6VQK4_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03720PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8403808474541	2	568.837331	1135.66011	2.9471	0.0016764	3.1993	0.0018199	6.1464	0.0034963	568.8388014048255	70.922	0.83921	72.264	71.732	72.571	1.3415					67	26	3	0	0	0	0.12205	1	29784	29784		60.074	2.6026	1	7533400			16047	16802	7489	7523	18888	18888					0.09770560574224874
KSPRVRGA	8	Unmodified	_KSPRVRGA_					0	0	0			REV__ENST00000485511.5_2_6:42952321-42952423:+|nuORF	REV__ENST00000485511.5_2_6:42952321-42952423:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7680236697197	2	435.767043	869.519533	2.9817	0.0012993	1.1405	0.000497	4.1222	0.0017963	435.7667951305053	85.583	0.40485	85.835	85.632	86.037	0.25227					16	12	2	0	0	0	0.88791	1	35805	35805		3.9444	1.6417	1	1610900	+		16048	13390	7490	7524	18889	18889					0.07955446431333257
KSRHRRIVART	11	Unmodified	_KSRHRRIVART_					0	0	0		ENST00000581655.1_1_17:80231026-80231098:-|nuORF	ENST00000581655.1_1_17:80231026-80231098:-|nuORF	ENST00000581655.1_1_17:80231026-80231098:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	690.4289428591728	2	690.426368	1378.83818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.076	1	98.167	97.667	98.667	0.090881								0	0	0	0.63775	1	41038	41038		2.4985	1.0166	1				16049	7437	7491	7525	18890	18890					0.16391668336632392
KSRNWRKKKVE	11	Unmodified	_KSRNWRKKKVE_					0	0	0			REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	REV__ENST00000457507.1_1_1:99473841-99474009:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2935363650322	3	486.959915	1457.85791	3.3514	0.001632	-1.8245	-0.00088846	1.5269	0.00074355	486.9590517720984	88.921	2.1704	89.144	88.217	90.387	0.2236					163	67	3	0	0	0	1.0402	1	37667	37667		0.094841	0	1	2885200	+		16050	13171	7492	7526	18891	18891					0.1472999955672094
KSRPHSMSDP	10	Unmodified	_KSRPHSMSDP_					0	0	0			REV__ENSG00000065060|ENST00000192788|BLTP3A	REV__ENSG00000065060|ENST00000192788|BLTP3A	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1866027712822	3	381.185474	1140.53459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.57	1	72.57	72.07	73.07	0								0	0	0	0.66052	1	30215	30215		3.5871	0.5148	1		+		16051	8669	7493	7527	18892	18892					-0.030054745536517657
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2486450076103	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.68	1	108.68	108.18	109.18	0								0	0	0	0.42693	1	46868	46868		0.26902	0	1				16052	6808	7494	7528	18893	18893					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2479736208916	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.735	1	93.879	93.379	94.379	0.14493								0	0	0	0.42693	1	39236	39236		0.26902	0	1				16053	6808	7494	7528	18894	18894					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2503845095634	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.893	1	94.038	93.538	94.538	0.14493								0	0	0	0.42693	1	39301	39301		0.26902	0	1				16054	6808	7494	7528	18895	18895					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2509643435478	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.737	1	93.609	93.109	94.109	0.87176								0	0	0	0.42693	1	39044	39044		0.26902	0	1				16055	6808	7494	7528	18896	18896					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2490722537041	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.865	1	93.736	93.236	94.236	0.87176								0	0	0	0.42693	1	39094	39094		0.26902	0	1				16056	6808	7494	7528	18897	18897					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2499877810478	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.038	1	93.91	93.41	94.41	0.87176								0	0	0	0.42693	1	39163	39163		0.26902	0	1				16057	6808	7494	7528	18898	18898					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2495300173759	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.125	1	93.452	92.952	93.952	1.3269								0	0	0	0.42693	1	38785	38785		1.1933	0	1				16058	6808	7494	7528	18899	18899					0.1634538552182221
KSRRKVVLF	9	Unmodified	_KSRRKVVLF_					0	0	0		ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	ENST00000479285.5_1_1:114438325-114438811:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2504150271416	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.24	1	93.567	93.067	94.067	1.3269								0	0	0	0.42693	1	38831	38831		0.26902	0	1				16059	6808	7494	7528	18900	18900					0.1634538552182221
KSRRQRKITH	10	Unmodified	_KSRRQRKITH_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-3|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2029907107353	4	328.203547	1308.78508	0.99574	0.00032681	-1.8534	-0.00060828	-0.85763	-0.00028148	328.2027426683189	38.867	1.1585	39.175	38.857	40.015	0.30857					135	37	5	0	0	0	0.89803	1	16361	16361		1.4551	0.24029	1	20874000			16060	3047	7495	7529	18901	18901					0.14304290553968713
KSRRQRKITH	10	Unmodified	_KSRRQRKITH_					0	0	0		ENSG00000143669|ENST00000389793|LYST;nc|ENSG00000143669|Q99698-3|LYST;ENST00000465349.5_1_1:235954948-235996891:-|nuORF;nc|ENSG00000143669|Q99698-2|LYST;ENST00000489585.5_1_1:235926109-235996891:-|nuORF	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2665588259697	3	437.268971	1308.78508	2.1909	0.00095801	-3.8117	-0.0016667	-1.6208	-0.00070871	437.2664554848373	41.85	0.27449	42.17	42.01	42.285	0.32058					18	8	3	0	0	0	0.8974	1	17618	17618		1.7423	0.28716	1	938030			16061	3047	7495	7529	18902	18902					0.14304290553968713
KSSKGKKS	8	Unmodified	_KSSKGKKS_					0	0	0		ENST00000448327.1_1_6:53493192-53495881:+|nuORF	ENST00000448327.1_1_6:53493192-53495881:+|nuORF	ENST00000448327.1_1_6:53493192-53495881:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	425.3145019412041	2	425.261259	848.507966	3.07	0.0013056	-3.0772	-0.0013086	-0.0071727	-3.0503E-06	425.2598938766717	99.875	0.1241	99.948	99.869	99.993	0.072716					6	3	2	0	0	0	2.3239	1	41808	41808		0.6015	0	1	1416500			16062	6592	7496	7530	18903	18903					0.07765204617317067
KSTKILTFF	9	Unmodified	_KSTKILTFF_					0	0	0		ENST00000604202.1_1_6:26374788-26375031:+|nuORF	ENST00000604202.1_1_6:26374788-26375031:+|nuORF	ENST00000604202.1_1_6:26374788-26375031:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2176086306572	3	362.21822	1083.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.831	1	94.831	94.331	95.331	0								0	0	0	0.42693	1	39633	39633		0.96228	0.26461	1				16063	7552	7497	7531	18904	18904					0.09436077033842594
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8892394900322	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.912	1	12.912	12.412	13.412	0								0	0	0	0.66151	1	5347	5347		1.9064	0	1		+		16064	9841	7498	7532	18905	18905					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.871	1	26.871	26.371	27.371	0								0	0	0	0.6623	1	11232	11232		0.56317	0	1		+		16065	9841	7498	7532	18906	18906					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.505	1	12.595	12.095	13.095	0.089381								0	0	0	0.66151	1	5191	5191		1.9064	0	1		+		16066	9841	7498	7532	18907	18907					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889953494072	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.786	1	12.876	12.376	13.376	0.089381								0	0	0	0.66052	1	5308	5308		3.5871	0.95582	1		+		16067	9841	7498	7532	18908	18908					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.902	1	13.002	12.502	13.502	0.09944								0	0	0	0.66151	1	5356	5356		1.9064	0	1		+		16068	9841	7498	7532	18909	18909					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.405	1	13.505	13.005	14.005	0.09944								0	0	0	0.66151	1	5563	5563		1.9064	0	1		+		16069	9841	7498	7532	18910	18910					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.44	1	14.553	14.053	15.053	0.11295								0	0	0	0.6617	1	5991	5991		1.5923	0	1		+		16070	9841	7498	7532	18911	18911					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.078	1	12.772	12.272	13.272	0.69396								0	0	0	0.66052	1	5018	5018		3.5871	1.0886	1		+		16071	9841	7498	7532	18912	18912					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.29	1	12.984	12.484	13.484	0.69396								0	0	0	0.66151	1	5105	5105		1.9064	0	1		+		16072	9841	7498	7532	18913	18913					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.408	1	13.102	12.602	13.602	0.69396								0	0	0	0.66151	1	5154	5154		1.9064	0	1		+		16073	9841	7498	7532	18914	18914					0.0072018456346540916
KSVDVEWYHK	10	Unmodified	_KSVDVEWYHK_					0	0	0			REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	REV__ENST00000495668.1_1_11:5664055-5664936:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882324099541	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.537	1	13.231	12.731	13.731	0.69396								0	0	0	0.66151	1	5206	5206		1.9064	0	1		+		16074	9841	7498	7532	18915	18915					0.0072018456346540916
KSVDWLLVF	9	Unmodified	_KSVDWLLVF_					0	0	0		nc|ENSG00000113621|Q96J42-2|TXNDC15;ENSG00000113621|ENST00000358387|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8179199099541	2	553.815867	1105.61718	2.7827	0.0015411	-0.10967	-6.0736E-05	2.673	0.0014804	553.8156747970514	82.841	0.55516	84.053	83.858	84.413	1.2125					54	17	4	0	0	0	0.070055	2	34777	34777;34830		60.074	17.527	1	8795600			16075	1833	7499	7533	18916;18917	18916					0.06859790516796238
KSVDWLLVF	9	Unmodified	_KSVDWLLVF_					0	0	0		nc|ENSG00000113621|Q96J42-2|TXNDC15;ENSG00000113621|ENST00000358387|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	nc|ENSG00000113621|Q96J42-2|TXNDC15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8173095583916	2	553.815867	1105.61718	3.0972	0.0017153	0.38426	0.00021281	3.4815	0.0019281	553.8159976746151	82.303	0.68089	83.973	83.766	84.447	1.67					54	21	4	0	0	0	0.04812	1	34541	34541		69.105	10.426	1	8075800			16076	1833	7499	7533	18918	18918					0.06859790516796238
KSVLRHRSGK	10	Unmodified	_KSVLRHRSGK_					0	0	0			REV__ENST00000583976.1_1_17:57189640-57232487:-|nuORF	REV__ENST00000583976.1_1_17:57189640-57232487:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3575927615166	2	584.357088	1166.69962	1.7917	0.001047	-0.56473	-0.00033001	1.227	0.00071699	584.3565666148345	72.795	1.6696	72.795	71.764	73.433	0					67	52	2	0	0	0	0.89803	1	30430	30430		1.4819	0	1	1868000	+		16077	14007	7500	7534	18919	18919					0.12294125368293862
KSWLEKKK	8	Unmodified	_KSWLEKKK_					0	0	0			REV__tr|A0A553SSZ1|A0A553SSZ1_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_03995PE=4SV=1	REV__tr|A0A553SSZ1|A0A553SSZ1_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_03995PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8217040896416	2	523.821484	1045.62842	2.162	0.0011325	-2.4513	-0.0012841	-0.28938	-0.00015158	523.8201995284138	81.044	0.98591	81.044	80.541	81.527	0					69	31	3	0	0	0	0.89152	1	33686	33686		1.6526	0.17072	1	1898400	+		16078	15222	7501	7535	18920	18920					0.1074261261094307
KSWYGFSFE	9	Unmodified	_KSWYGFSFE_					0	0	0			REV__ENSG00000154781|ENST00000383794|CCDC174	REV__ENSG00000154781|ENST00000383794|CCDC174	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	384.2963744997978	3	384.178313	1149.51311	1.3241	0.00050868	0.33642	0.00012924	1.6605	0.00063792	384.51289455708155	83.407	0.28407	84.595	84.42	84.704	1.1879					12	8	2	0	0	0	0.11833	1	34944	34944		2.4985	0	1	628320	+		16079	8365	7502	7536	18921	18921					-0.05566536310720949
KSYQDERTIY	10	Unmodified	_KSYQDERTIY_					0	0	0			REV__FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant	REV__FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8831054568291	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7784	1	6.8584	6.3584	7.3584	0.079923								0	0	0	0.66254	1	2802	2802		0.15932	0	1		+		16080	8761	7503	7537	18922	18922					-0.013567270243584062
KTAKRLVKV	9	Unmodified	_KTAKRLVKV_					0	0	0		ENST00000491632.5_1_1:235341091-235490234:-|nuORF;nc|ENSG00000054267|Q4LE39-3|ARID4B;nc|ENSG00000054267|Q4LE39-2|ARID4B;ARID4B|p.P1212Qfs*38|1|0.04|ENSG00000054267|chr1:235175203-235175213|GTAAACTTTGG/-|frameshift_variant;ENSG00000054267|ENST00000264183|ARID4B;ENST00000466653.1_1_1:235392530-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	ENST00000491632.5_1_1:235341091-235490234:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	348.2066833376884	3	348.241359	1041.70225	0.38204	0.00013304	-0.26414	-9.1985E-05	0.1179	4.1058E-05	348.5763649136569	30.588	0.18966	32.403	32.294	32.483	1.8151					8	5	2	0	0	0	0.11944	1	12802	12802		0.96228	0.69326	1	222480			16081	79	7504	7538	18923	18923					0.18306580773264614
KTAKTKKG	8	Unmodified	_KTAKTKKG_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	431.2807189822197	2	431.279452	860.544351	3.125	0.0013478	0.90158	0.00038883	4.0266	0.0017366	431.27943743573525	104	0.093872	104.06	103.99	104.09	0.059502					9	4	3	0	0	0	0.89198	1	43783	43783		0	0	1	18591000			16082	2243	7505	7539	18924	18924					0.10850081514058729
KTAKTKKG	8	Unmodified	_KTAKTKKG_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	431.279452	860.544351	3.2514	0.0014023	0.17857	7.7014E-05	3.4299	0.0014793	431.27897849058616	103.96	0.074493	104.12	104.07	104.15	0.16055	0.026994	-0.00022697	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10657000			16083	2243	7505	7539							0.10850081514058729
KTAKTKKG	8	Unmodified	_KTAKTKKG_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	431.279452	860.544351	3.2988	0.0014227	-0.95305	-0.00041103	2.3457	0.0010117	431.27853898486603	103.92	0.078575	104.09	104.05	104.13	0.1731	0.0039033	-0.0012031	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8661200			16084	2243	7505	7539							0.10850081514058729
KTANNKMGTKL	11	Unmodified	_KTANNKMGTKL_					0	0	0			REV__ENSG00000173545|ENST00000308683|ZNF622	REV__ENSG00000173545|ENST00000308683|ZNF622	MSMS	GG20161007_CRH_Patient100_A02_02	2	603.3382446169853	2	603.337172	1204.65979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.45	1	104.51	104.01	105.01	0.056801								0	0	0	0.63775	1	44049	44049		4.897	0.56777	1		+		16085	11103	7506	7540	18925	18925					0.06564817582739124
KTARKWSCF	9	Unmodified	_KTARKWSCF_					0	0	0			REV__ENST00000359766.7_1_2:171854270-171854318:-|nuORF	REV__ENST00000359766.7_1_2:171854270-171854318:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2021362185478	3	376.199054	1125.57533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.636	1	67.035	66.535	67.535	1.3989								0	0	0	0.42693	1	27527	27527		2.4985	0.41248	1		+		16086	12589	7507	7541	18926	18926					0.017569115566402616
KTAVGAQKV	9	Unmodified	_KTAVGAQKV_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1879150271416	3	301.187032	900.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.154	1	15.05	14.55	15.55	0.89664								0	0	0	0.42693	1	5870	5870		2.2828	0.43854	1		+		16087	10655	7508	7542	18927	18927					0.08501777651429165
KTCISMCGL	9	Unmodified	_KTCISMCGL_					0	0	0			REV__ENST00000505030.5_1_5:87962157-87962301:-|nuORF	REV__ENST00000505030.5_1_5:87962157-87962301:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2271606326103	2	478.224116	954.43368	2.8217	0.0013494	-4.0541	-0.0019387	-1.2324	-0.00058936	478.22457276122253	79.708	0.49569	80.959	80.675	81.171	1.2512					44	15	5	0	0	0	0.49082	1	33441	33441		15.847	3.3156	1	3228900	+		16088	13530	7509	7543	18928	18928					-0.04535965852358004
KTFIAVLSL	9	Unmodified	_KTFIAVLSL_					0	0	0		ENST00000375633.5_1_6:31803167-31805014:+|nuORF;ENST00000375640.7_1_6:31802864-31805014:+|nuORF;ENST00000375635.6_1_6:31802703-31805014:+|nuORF;ENST00000375642.6_1_6:31802864-31804179:+|nuORF;ENST00000375638.7_1_6:31802780-31805136:+|nuORF;ENST00000395789.5_1_6:31802780-31805136:+|nuORF	ENST00000375633.5_1_6:31803167-31805014:+|nuORF	ENST00000375633.5_1_6:31803167-31805014:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3127624392509	2	496.312961	990.611368	1.4732	0.00073117	-0.16188	-8.0341E-05	1.3113	0.00065083	496.3129482285166	57.122	0.299	58.536	58.338	58.637	1.4145					14	9	2	0	0	0	0.37252	1	23952	23952		28.495	9.2375	1	1535900			16089	6183	7510	7544	18929	18929					0.11568692005130288
KTFLWFLLSL	10	Unmodified	_KTFLWFLLSL_					0	0	0		SUN2|p.P219S|1|0.09|ENSG00000100242|chr22:38748743-38748743|G/A|missense_variant	SUN2|p.P219S|1|0.09|ENSG00000100242|chr22:38748743-38748743|G/A|missense_variant	SUN2|p.P219S|1|0.09|ENSG00000100242|chr22:38748743-38748743|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2522460818291	3	423.253154	1266.73763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.48	1	114.48	113.98	114.98	0								0	0	0	0.66176	1	49426	49426		0.62683	0	1				16090	16009	7511	7545	18930	18930					0.1149319851040218
KTFPDLVIY	9	Unmodified	_KTFPDLVIY_					0	0	0		ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3099853396416	2	548.307875	1094.6012	2.1882	0.0011998	2.4305	0.0013327	4.6187	0.0025325	548.3083657671574	59.213	1.0397	60.633	60.35	61.39	1.4196					64	33	2	0	0	0	0.1388	2	24837	24787;24837		39.95	11.039	1	4100800			16091	2687	7512	7546	18931;18932	18932					0.05768084279884533
KTFPDLVIY	9	Unmodified	_KTFPDLVIY_					0	0	0		ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3106567263603	2	548.307875	1094.6012	2.3803	0.0013052	2.2991	0.0012606	4.6794	0.0025658	548.3083033143918	58.847	0.86034	60.816	60.544	61.405	1.969					50	27	3	0	0	0	0.1388	1	24702	24702		39.95	5.8473	1	3949100			16092	2687	7512	7546	18933	18933					0.05768084279884533
KTFPDLVIY	9	Unmodified	_KTFPDLVIY_					0	0	0		ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	ENSG00000135828|ENST00000367559|RNASEL	MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3060790896416	2	548.307875	1094.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.571	1	60.54	60.04	61.04	1.969								0	0	0	0.10913	1	24572	24572		32.786	2.1491	1				16093	2687	7512	7546	18934	18934					0.05768084279884533
KTGRRHQRR	9	Unmodified	_KTGRRHQRR_					0	0	0			REV__ENST00000485665.1_1_9:35680733-35681019:+|nuORF	REV__ENST00000485665.1_1_9:35680733-35681019:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8572875857353	2	597.855578	1193.6966	2.2076	0.0013198	0.97461	0.00058267	3.1822	0.0019025	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.85019	1	31198	31198		0.52476	0	1	2856000	+		16094	9222	7513	7547	18935	18935					0.10750295034154078
KTGRTKIYL	9	Unmodified	_KTGRTKIYL_					0	0	0		L1ME3D_dup2897|chr11:77321448-77321863:+|1.1025883766517437|0.4690870771856612|1.23|429.0|3|1|sense	L1ME3D_dup2897|chr11:77321448-77321863:+|1.1025883766517437|0.4690870771856612|1.23|429.0|3|1|sense	L1ME3D_dup2897|chr11:77321448-77321863:+|1.1025883766517437|0.4690870771856612|1.23|429.0|3|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3327514529228	2	540.332216	1078.64988	1.4108	0.00076229	-1.7112	-0.00092459	-0.30037	-0.0001623	540.3312259445505	70.558	0.78256	70.88	70.647	71.429	0.32223					63	24	3	0	0	0	0.82604	1	29569	29569		2.3027	0	1	2526700			16095	7711	7514	7548	18936	18936					0.1136999763964468
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	977.6012451052666	1	977.598972	976.591695	3.4	0.0033238	-1.0502	-0.0010266	2.3499	0.0022972	977.5978233396496	107.66	0.18239	107.82	107.7	107.88	0.15781					29	9	4	0	0	0	0.85403	1	46348	46348		0	0	1	515380000	+		16096	9063	7515	7549	18937	18937					0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	977.6017944216728	1	977.598972	976.591695	3.2027	0.0031309	-0.42392	-0.00041442	2.7787	0.0027165	977.5982574964728	106.07	0.15823	106.23	106.15	106.31	0.16174					19	8	3	0	0	0	0.85403	1	45279	45279		0	0	1	91619000	+		16097	9063	7515	7549	18938	18938					0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	977.6012451052666	1	977.598972	976.591695	3.2031	0.0031314	-1.1454	-0.0011197	2.0577	0.0020116	977.5977848085057	107.66	0.18519	107.82	107.68	107.86	0.15796					29	9	4	0	0	0	0.85403	1	46273	46273		0	0	1	224280000	+		16098	9063	7515	7549	18939	18939					0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	977.598972	976.591695	1.196	0.0011692	2.7834	0.002721	3.9794	0.0038902	977.6027994253543	106.18	0.094955	106.18	106.13	106.23	0	-0.041076	0.0026738	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12185000	+		16099	9063	7515	7549							0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	977.598972	976.591695	2.8089	0.002746	0.92165	0.000901	3.7305	0.003647	977.6013630920972	106.14	0.12302	106.19	106.12	106.25	0.05455	-0.027165	0.00085382	NaN	0	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19124000	+		16100	9063	7515	7549							0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	977.598972	976.591695	3.4	0.0033238	-1.0502	-0.0010266	2.3499	0.0022972	977.5978233396496	107.66	0.18239	107.82	107.7	107.88	0.15781	-0.00013679	6.4752E-05	NaN	0	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515380000	+		16101	9063	7515	7549							0.10246315994356792
KTGTKTTKL	9	Unmodified	_KTGTKTTKL_					0	0	0			REV__ENSG00000102221|ENST00000614628|JADE3	REV__ENSG00000102221|ENST00000614628|JADE3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	977.598972	976.591695	3.2027	0.0031309	-0.42392	-0.00041442	2.7787	0.0027165	977.5982574964728	106.07	0.15823	106.23	106.15	106.31	0.16174	0.012055	-0.0004616	NaN	0	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91619000	+		16102	9063	7515	7549							0.10246315994356792
KTHKTLRGR	9	Unmodified	_KTHKTLRGR_					0	0	0			REV__ENSG00000130255|ENST00000347512|RPL36	REV__ENSG00000130255|ENST00000347512|RPL36	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2294189333916	3	366.228113	1095.66251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.33	1	99.41	98.91	99.91	0.080376								0	0	0	0.42693	1	41587	41587		0.96228	0.0979	1		+		16103	9773	7516	7550	18940	18940					0.11850453822557938
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9421874880791	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.25	1	105.25	104.75	105.75	0								0	0	0	0.66264	1	44632	44632		0	0	1				16104	17094	7517	7551	18941	18941					0.27185428598181716
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9427978396416	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.35	104.85	105.85	0								0	0	0	0.66264	1	44695	44695		0	0	1				16105	17094	7517	7551	18942	18942					0.27185428598181716
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9431640505791	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.47	1	105.47	104.97	105.97	0								0	0	0	0.66264	1	44776	44776		0	0	1				16106	17094	7517	7551	18943	18943					0.27185428598181716
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9433471560478	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.57	1	105.57	105.07	106.07	0								0	0	0	0.66264	1	44840	44840		0	0	1				16107	17094	7517	7551	18944	18944					0.27185428598181716
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9433471560478	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.67	1	105.67	105.17	106.17	0								0	0	0	0.66264	1	44906	44906		0	0	1				16108	17094	7517	7551	18945	18945					0.27185428598181716
KTIKKLKKIL	10	Unmodified	_KTIKKLKKIL_					0	0	0		tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9434081912041	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.8	1	105.8	105.3	106.3	0								0	0	0	0.66264	1	44999	44999		0	0	1				16109	17094	7517	7551	18946	18946					0.27185428598181716
KTILPKVMQVK	11	Unmodified	_KTILPKVMQVK_					0	0	0		ENST00000484386.1_1_15:44097294-44102132:-|nuORF;ENSG00000140259|ENST00000267812|MFAP1	ENST00000484386.1_1_15:44097294-44102132:-|nuORF	ENST00000484386.1_1_15:44097294-44102132:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	322.1862365603447	4	321.957255	1283.79991	1.2847	0.00041362	-3.4572	-0.0011131	-2.1725	-0.00069947	322.20674486299004	50.035	0.19027	51.426	51.292	51.482	1.3911					7	5	2	0	0	0	0.14606	1	20916	20916		0.50596	0.051438	1	1588600			16110	2904	7518	7552	18947	18947					0.16936601587076439
KTKEQGKR	8	Unmodified	_KTKEQGKR_					0	0	0			REV__ZDHHC23|p.C212S|1|0.09|ENSG00000184307|chr3:113954172-113954172|T/A|missense_variant	REV__ZDHHC23|p.C212S|1|0.09|ENSG00000184307|chr3:113954172-113954172|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7911865115166	2	487.790715	973.566878	1.8361	0.00089565	-0.028455	-1.388E-05	1.8077	0.00088177	487.7906861622021	64.493	2.2195	64.493	63.773	65.992	0					95	69	2	0	0	0	0.8909	1	27069	27069		2.0598	0.21551	1	1453800	+		16111	11419	7519	7553	18948	18948					0.07903680911658739
KTKEQGKR	8	Unmodified	_KTKEQGKR_					0	0	0			REV__ZDHHC23|p.C212S|1|0.09|ENSG00000184307|chr3:113954172-113954172|T/A|missense_variant	REV__ZDHHC23|p.C212S|1|0.09|ENSG00000184307|chr3:113954172-113954172|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7919799685478	2	487.790715	973.566878	2.489	0.0012141	0.3147	0.00015351	2.8037	0.0013676	487.7906989832591	79.466	0.69469	79.766	79.247	79.942	0.30047					48	21	3	0	0	0	0.8909	1	33164	33164		2.0598	0	1	4325800	+		16112	11419	7519	7553	18949	18949					0.07903680911658739
KTKGRKRKT	9	Unmodified	_KTKGRKRKT_					0	0	0		nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000144893|Q86YW9-4|MED12L	MSMS	GG20161007_CRH_Patient100_A02_01	1	368.2425414919853	3	368.243763	1101.70946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.19	1	105.19	104.69	105.69	0								0	0	0	0.42693	1	44592	44592		0.26902	0	1				16113	3097	7520	7554	18950	18950					0.1626731337369165
KTKKAPIKTI	10	Unmodified	_KTKKAPIKTI_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3790161013603	2	564.379166	1126.74378	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.73	1	102.91	102.41	103.41	0.18066								0	0	0	0.66176	1	43227	43227		1.4819	0.15237	1				16114	823	7521	7555	18951	18951					0.18547716741932163
KTKKLKKLYAK	11	Unmodified	_KTKKLKKLYAK_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C;ENST00000488341.5_1_2:26174656-26179274:-|nuORF;ENST00000475453.1_1_2:26177134-26203442:-|nuORF	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2330505251884	4	337.981424	1347.89659	0.11537	3.8992E-05	2.518	0.00085103	2.6333	0.00089002	337.98209974058784	25.471	1.0381	27.188	26.514	27.552	1.7167					86	33	4	0	0	0	1.0405	1	10646	10646		0	0	1	4738500			16115	1055	7522	7556	18952	18952					0.23655912138565327
KTKKLKKLYAK	11	Unmodified	_KTKKLKKLYAK_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C;ENST00000488341.5_1_2:26174656-26179274:-|nuORF;ENST00000475453.1_1_2:26177134-26203442:-|nuORF	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2335082888603	4	337.981424	1347.89659	0.16816	5.6835E-05	2.9183	0.00098632	3.0864	0.0010432	338.2335320460658	26.659	0.18648	28.406	28.337	28.524	1.747					11	6	2	0	0	0	1.0405	1	11156	11156		0	0	1	1482600			16116	1055	7522	7556	18953	18953					0.23655912138565327
KTKNISELRV	10	Unmodified	_KTKNISELRV_					0	0	0			REV__tr|A0A7D6VQ23|A0A7D6VQ23_9CLOTMetallophosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18575PE=4SV=1	REV__tr|A0A7D6VQ23|A0A7D6VQ23_9CLOTMetallophosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_18575PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	594.3584472537041	2	594.358962	1186.70337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.95	1	102.14	101.64	102.64	0.19076								0	0	0	0.65926	1	42869	42869		5.7319	1.7875	1		+		16117	15371	7523	7557	18954	18954					0.11748750351489434
KTKTEIVV	8	Unmodified	_KTKTEIVV_					0	0	0		SYNM|p.V1009Afs*14|1|0.19|ENSG00000182253|chr15:99131385-99131386|-/CTCGGTGTACGGGCAGATCCACA|frameshift_variant;nc|ENSG00000182253|O15061-2|SYNM;ENSG00000182253|ENST00000336292|SYNM	SYNM|p.V1009Afs*14|1|0.19|ENSG00000182253|chr15:99131385-99131386|-/CTCGGTGTACGGGCAGATCCACA|frameshift_variant	SYNM|p.V1009Afs*14|1|0.19|ENSG00000182253|chr15:99131385-99131386|-/CTCGGTGTACGGGCAGATCCACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1727477908134	2	459.286943	916.559333	2.7725	0.0012734	-2.7687	-0.0012716	0.0038115	1.7506E-06	459.2856491888322	84.607	0.42276	86.203	85.919	86.341	1.5962					18	13	2	0	0	0	2.3239	1	35383	35383		0.79363	0	1	861400			16118	4610	7524	7558	18955	18955					0.09771528591375045
KTKTKTKAK	9	Unmodified	_KTKTKTKAK_					0	0	0		ENST00000448942.5_1_6:138178656-138178794:-|nuORF	ENST00000448942.5_1_6:138178656-138178794:-|nuORF	ENST00000448942.5_1_6:138178656-138178794:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2290832400322	3	345.229119	1032.66553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.47	1	106.47	105.97	106.97	0								0	0	0	0.42693	1	45434	45434		0	0	1				16119	6595	7525	7559	18956	18956					0.15050284156677662
KTKTKTKAK	9	Unmodified	_KTKTKTKAK_					0	0	0		ENST00000448942.5_1_6:138178656-138178794:-|nuORF	ENST00000448942.5_1_6:138178656-138178794:-|nuORF	ENST00000448942.5_1_6:138178656-138178794:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2274047732353	3	345.229119	1032.66553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.62	1	106.62	106.12	107.12	0								0	0	0	0.42693	1	45519	45519		0	0	1				16120	6595	7525	7559	18957	18957					0.15050284156677662
KTKVKYYI	8	Unmodified	_KTKVKYYI_					0	0	0			REV__nc|ENSG00000153093|Q9NUZ1-2|ACOXL	REV__nc|ENSG00000153093|Q9NUZ1-2|ACOXL	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2173034548759	3	348.214699	1041.62227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.01	1	101.19	100.69	101.69	0.18047								0	0	0	1.0178	1	42499	42499		0.45834	0	1		+		16121	10442	7526	7560	18958	18958					0.1031209437940106
KTLMVVITSNN	11	Unmodified	_KTLMVVITSNN_					0	0	0			REV__nc|ENSG00000105426|Q13332-7|PTPRS	REV__nc|ENSG00000105426|Q13332-7|PTPRS	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.3414794802666	2	610.339381	1218.66421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.33	1	103.39	102.89	103.89	0.059502								0	0	0	0.63775	1	43320	43320		1.1933	0	1		+		16122	9172	7527	7561	18959	18959					0.06362282005648012
KTNRTAIAI	9	Unmodified	_KTNRTAIAI_					0	0	0			REV__ENST00000474481.1_1_1:1421456-1424590:+|nuORF	REV__ENST00000474481.1_1_1:1421456-1424590:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3020507693291	2	494.300916	986.587279	1.6955	0.00083811	-0.029839	-1.4749E-05	1.6657	0.00082336	494.3008275028269	81.541	0.659	81.541	81.195	81.854	0					76	21	5	0	0	0	0.85403	1	33974	33974		0	0	1	190100000	+		16123	10587	7528	7562	18960	18960					0.0934485157143854
KTPARKKRLR	10	Unmodified	_KTPARKKRLR_					0	0	0		nc|ENSG00000132313|Q9NZE8-2|MRPL35;ENSG00000132313|ENST00000337109|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	nc|ENSG00000132313|Q9NZE8-2|MRPL35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.4204589724541	2	627.41748	1252.82041	2.7169	0.0017046	0.8157	0.00051179	3.5326	0.0022164	627.4179474846387	107.36	0.22951	107.51	107.39	107.62	0.15795					33	11	4	0	0	0	0.89803	1	46084	46084		1.4819	0	1	492670000			16124	2524	7529	7563	18961	18961					0.20410953081795924
KTPDFILQV	9	Unmodified	_KTPDFILQV_					0	0	0		ENST00000570265.5_1_15:36871929-37039277:+|nuORF;ENSG00000186073|ENST00000566621|CDIN1;ENST00000566677.1_1_15:37001404-37100651:+|nuORF;nc|ENSG00000186073|Q9Y2V0-2|CDIN1	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8063232302666	2	530.8055	1059.59645	1.3711	0.0007278	0.46711	0.00024794	1.8382	0.00097574	530.8058882480352	56.646	0.67963	58.06	57.658	58.338	1.4145					70	21	5	0	0	0	0.026734	3	23775	23735;23775;23818		92.653	26.352	1	54351000			16125	7387	7530	7564	18962;18963;18964	18963					0.0690320013713972
KTPDFILQV	9	Unmodified	_KTPDFILQV_					0	0	0		ENST00000570265.5_1_15:36871929-37039277:+|nuORF;ENSG00000186073|ENST00000566621|CDIN1;ENST00000566677.1_1_15:37001404-37100651:+|nuORF;nc|ENSG00000186073|Q9Y2V0-2|CDIN1	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8062011599541	2	530.8055	1059.59645	1.3467	0.00071482	0.050232	2.6664E-05	1.3969	0.00074149	530.8056654504567	56.042	0.61296	58.01	57.69	58.303	1.9684					64	19	4	0	0	0	0.010585	3	23490	23490;23530;23569		106.94	32.011	1	37458000			16126	7387	7530	7564	18965;18966;18967	18965					0.0690320013713972
KTPIMKPGKPK	11	Unmodified	_KTPIMKPGKPK_					0	0	0		ENSG00000178764|ENST00000314393|ZHX2	ENSG00000178764|ENST00000314393|ZHX2	ENSG00000178764|ENST00000314393|ZHX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.9225341677666	3	408.921409	1223.7424	3.8595	0.0015782	-0.084097	-3.4389E-05	3.7754	0.0015439	408.92131048066193	91.665	0.55401	92.601	92.307	92.861	0.93623					55	17	4	0	0	0	1.0366	2	38597	38597;38649		0.40827	0.17242	1	16028000			16127	4492	7531	7565	18968;18969	18968					0.13947759381517244
KTPKNREK	8	Unmodified	_KTPKNREK_					0	0	0		ENSG00000158553|ENST00000444565|POM121L2	ENSG00000158553|ENST00000444565|POM121L2	ENSG00000158553|ENST00000444565|POM121L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7985717654228	2	500.79854	999.582528	1.7093	0.00085602	-0.217	-0.00010867	1.4923	0.00074735	500.79797369768573	77.611	0.43394	77.611	77.377	77.811	0					32	13	3	0	0	0	0.89051	1	32300	32300		2.3027	0.4585	1	6020200			16128	3503	7532	7566	18970	18970					0.08271967428697735
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3676025271416	2	577.367456	1152.72036	2.4018	0.0013867	-1.5594	-0.00090034	0.8424	0.00048637	577.3665049446504	88.409	0.58199	88.409	88.119	88.701	0					69	18	5	0	0	0	0.83753	1	36962	36962		1.8442	0.19162	1	76654000	+		16129	8291	7533	7567	18971	18971					0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3688842654228	2	577.367456	1152.72036	2.4923	0.001439	-0.51786	-0.00029899	1.9744	0.00114	577.3671412862619	88.258	0.68922	88.493	88.228	88.917	0.23471					80	21	5	0	0	0	0.83753	3	36982	36982;37033;37072		1.8442	1.8442	1	87194000	+		16130	8291	7533	7567	18972;18973;18974	18972					0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	385.2481262087822	3	385.247396	1152.72036	2.5637	0.00098765	-0.25467	-9.8111E-05	2.309	0.00088954	385.2471903461408	88.289	0.4955	88.523	88.228	88.723	0.23471					52	15	4	0	0	0	0.83753	1	37009	37009		0.96228	0.33545	1	16854000	+		16131	8291	7533	7567	18975	18975					0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3701660037041	2	577.367456	1152.72036	4.5246	0.0026123	-0.38486	-0.0002222	4.1397	0.0023901	577.3671038935288	87.504	0.56018	88.596	88.335	88.895	1.0918					64	17	5	0	0	0	0.83753	2	36846	36846;37004		1.8442	0.36234	1	32880000	+		16132	8291	7533	7567	18976;18977	18976					0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3687621951103	2	577.367456	1152.72036	4.6592	0.0026901	-1.3879	-0.00080131	3.2714	0.0018888	577.3665508263879	87.223	0.52708	88.719	88.456	88.983	1.4953					60	16	5	0	0	0	0.83753	3	36750	36750;36801;36856		1.8442	1.8442	1	36474000	+		16133	8291	7533	7567	18978;18979;18980	18978					0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	577.367456	1152.72036	4.5246	0.0026123	-0.38486	-0.0002222	4.1397	0.0023901	577.3671038935288	87.504	0.56018	88.596	88.335	88.895	1.0918	0.041426	0.00082743	NaN	1.8442	64	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32880000	+		16134	8291	7533	7567							0.1501071574798516
KTPRIRRNL	9	Unmodified	_KTPRIRRNL_					0	0	0			REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	REV__ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	577.367456	1152.72036	4.6592	0.0026901	-1.3879	-0.00080131	3.2714	0.0018888	577.3665508263879	87.223	0.52708	88.719	88.456	88.983	1.4953	0.16452	-0.00033078	NaN	1.8442	60	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36474000	+		16135	8291	7533	7567							0.1501071574798516
KTPRTRKRKVM	11	Unmodified	_KTPRTRKRKVM_					0	0	0			REV__ENST00000560583.5_1_19:55899571-55899697:+|nuORF	REV__ENST00000560583.5_1_19:55899571-55899697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	700.9335815310478	2	700.93518	1399.85581	1.669	0.0011699	-3.6248	-0.0025408	-1.9558	-0.0013709	700.9322598288766	97.261	0.15581	97.261	97.165	97.321	0					15	4	4	0	0	0	1.0366	1	40663	40663		1.1933	0	1	9192300	+		16136	9249	7534	7568	18981	18981					0.17187247547258266
KTPSLRPGRR	10	Unmodified	_KTPSLRPGRR_					0	0	0			REV__chr19:7639807-7640761|106|14.33|0.0|20.45|+|1|STXBP2,None|2	REV__chr19:7639807-7640761|106|14.33|0.0|20.45|+|1|STXBP2,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3578979372978	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89803	1	31188	31188		1.4819	0.15237	1	7390500	+		16137	8293	7535	7569	18982	18982					0.122941253683166
KTPVEIPRN	9	Unmodified	_KTPVEIPRN_					0	0	0		ENST00000529587.1_1_11:9806704-9806878:-|nuORF	ENST00000529587.1_1_11:9806704-9806878:-|nuORF	ENST00000529587.1_1_11:9806704-9806878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.3062011599541	2	527.306198	1052.59784	2.5619	0.0013509	-3.3536	-0.0017684	-0.79175	-0.0004175	527.3041630848196	83.761	0.42569	84.031	83.832	84.257	0.27029					33	13	3	0	0	0	0.79362	1	35003	35003		3.5965	0	1	6594700			16138	7155	7536	7570	18983	18983					0.07364834225904815
KTPVLLTA	8	Unmodified	_KTPVLLTA_					0	0	0		tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7703735232353	2	421.770929	841.527304	1.0932	0.00046106	-3.213	-0.0013551	-2.1198	-0.00089407	421.76943837195097	81.429	0.56863	81.429	81.133	81.701	0					42	18	3	0	0	0	0.8873	1	33879	33879		4.3292	0	1	6214900			16139	17178	7537	7571	18984	18984					0.10020160908220532
KTPVLLTA	8	Unmodified	_KTPVLLTA_					0	0	0		tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7706176638603	2	421.770929	841.527304	2.3181	0.0009777	-3.2738	-0.0013808	-0.95572	-0.0004031	421.76922537061483	81.297	0.7336	81.588	81.058	81.791	0.29056					51	23	4	0	0	0	0.8873	1	33943	33943		4.3292	0	1	5201700			16140	17178	7537	7571	18985	18985					0.10020160908220532
KTPVLLTAI	9	Unmodified	_KTPVLLTAI_					0	0	0		tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	tr|A0A7D6ZWT9|A0A7D6ZWT9_9CLOTElectrontransferflavoproteinsmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_20385PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3146240115166	2	478.312961	954.611368	3.2661	0.0015622	-0.76111	-0.00036405	2.5049	0.0011981	478.3125431604834	106.1	0.19471	106.26	106.16	106.35	0.15781					39	10	5	0	0	0	0.83753	1	45323	45323		1.8442	0	1	1071799999.9999999			16141	17178	7538	7572	18986	18986					0.13224692005110228
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2594787478447	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.988	1	91.988	91.488	92.488	0								0	0	0	0.42693	1	38440	38440		0.77653	0.27058	1				16142	7977	7539	7573	18987	18987					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2609130740166	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.609	1	91.8	91.3	92.3	0.19042								0	0	0	0.42693	1	38370	38370		0.20686	0	1				16143	7977	7539	7573	18988	18988					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2597839236259	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.825	1	92.015	91.515	92.515	0.19042								0	0	0	0.42693	1	38456	38456		0.77653	0.27058	1				16144	7977	7539	7573	18989	18989					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2594787478447	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.026	1	92.217	91.717	92.717	0.19042								0	0	0	0.42693	1	38538	38538		0.20686	0	1				16145	7977	7539	7573	18990	18990					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2610656619072	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.029	1	92.011	91.511	92.511	0.98157								0	0	0	0.42693	1	38342	38342		0.77653	0.27058	1				16146	7977	7539	7573	18991	18991					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2606078982353	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.197	1	92.178	91.678	92.678	0.98157								0	0	0	0.42693	1	38411	38411		0.77653	0.27058	1				16147	7977	7539	7573	18992	18992					0.1676092287082156
KTRRKRRSV	9	Unmodified	_KTRRKRRSV_					0	0	0		nc|ENSG00000204305|Q15109-8|AGER;nc|ENSG00000204305|Q15109-9|AGER;nc|ENSG00000204305|Q15109-10|AGER	nc|ENSG00000204305|Q15109-8|AGER	nc|ENSG00000204305|Q15109-8|AGER	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2603332400322	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.638	1	92.004	91.504	92.504	1.366								0	0	0	0.42693	1	38172	38172		0.77653	0.27058	1				16148	7977	7539	7573	18993	18993					0.1676092287082156
KTSELCKTLSI	11	Unmodified	_KTSELCKTLSI_					0	0	0			REV__nc|ENSG00000150527|Q96PC5-2|MIA2	REV__nc|ENSG00000150527|Q96PC5-2|MIA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.8403198122978	2	611.839213	1221.66387	3.0617	0.0018733	-1.5364	-0.00094005	1.5253	0.00093321	612.340930415207	85.112	1.4263	86.708	86.064	87.491	1.5962					277	55	7	0	0	0	1.0373	1	36090	36090		0.96228	0.36078	1	138820000	+		16149	10381	7540	7574	18994	18994					0.061908622857799855
KTSKRHKK	8	Unmodified	_KTSKRHKK_					0	0	0			REV__tr|A0A553SHI4|A0A553SHI4_NIACIInitiation-controlproteinYabAOS=NialliacirculansOX=1397GN=yabAPE=3SV=1	REV__tr|A0A553SHI4|A0A553SHI4_NIACIInitiation-controlproteinYabAOS=NialliacirculansOX=1397GN=yabAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2179748415947	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.691	1	90.9	90.4	91.4	0.20904								0	0	0	1.0178	1	38000	38000		0.40072	0.16487	1		+		16150	14797	7541	7575	18995	18995					0.1247966641955145
KTTAGRPR	8	Unmodified	_KTTAGRPR_					0	0	0		ENST00000478344.6_1_9:140240409-140242569:-|nuORF	ENST00000478344.6_1_9:140240409-140242569:-|nuORF	ENST00000478344.6_1_9:140240409-140242569:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7656127810478	2	443.764501	885.514448	2.8795	0.0012778	-0.029201	-1.2958E-05	2.8503	0.0012648	443.7643183862017	73.86	0.81805	74.185	73.605	74.423	0.32494					59	25	3	0	0	0	0.89178	1	30862	30862		0.69038	0	1	5334600			16151	6800	7542	7576	18996	18996					0.0671114256869032
KTTGNEIDF	9	Unmodified	_KTTGNEIDF_					0	0	0			REV__ENSG00000175065|ENST00000308128|DSG4	REV__ENSG00000175065|ENST00000308128|DSG4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.2914306521416	2	512.750921	1023.48729	4.7619	0.0024417	-3.7648	-0.0019304	0.99713	0.00051128	512.7478873564211	87.385	0.27707	88.477	88.335	88.612	1.0918					19	8	3	0	0	0	0.1144	1	36808	36808		13.906	8.1742	1	836260	+		16152	11140	7543	7577	18997	18997					-0.023514305529943158
KTTGNEIDF	9	Unmodified	_KTTGNEIDF_					0	0	0			REV__ENSG00000175065|ENST00000308128|DSG4	REV__ENSG00000175065|ENST00000308128|DSG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	512.750921	1023.48729	2.6833	0.0013758	-5.9523	-0.003052	-3.269	-0.0016762	512.7474163722155	88.707	0.25253	88.707	88.606	88.859	0	0.16442	-0.0015613	NaN	13.906	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397510	+		16153	11140	7543	7577							-0.023514305529943158
KTTGNEIDF	9	Unmodified	_KTTGNEIDF_					0	0	0			REV__ENSG00000175065|ENST00000308128|DSG4	REV__ENSG00000175065|ENST00000308128|DSG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	512.750921	1023.48729	2.7567	0.0014135	-2.4987	-0.0012812	0.25796	0.00013227	512.74856389585	88.292	0.21178	88.527	88.386	88.598	0.2347	-0.015784	0.0019804	NaN	13.906	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426600	+		16154	11140	7543	7577							-0.023514305529943158
KTTGNEIDF	9	Unmodified	_KTTGNEIDF_					0	0	0			REV__ENSG00000175065|ENST00000308128|DSG4	REV__ENSG00000175065|ENST00000308128|DSG4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	512.750921	1023.48729	5.0361	0.0025823	-4.7033	-0.0024116	0.33275	0.00017062	512.748447272785	86.965	0.24923	88.46	88.301	88.55	1.4953	-0.082795	-0.00028047	NaN	13.906	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	548820	+		16155	11140	7543	7577							-0.023514305529943158
KTTLPGVV	8	Unmodified	_KTTLPGVV_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MSMS	GG20161007_CRH_Patient100_A02_01	1	407.7551452517509	2	407.755278	813.496004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.805	1	61.805	61.305	62.305	0								0	0	0	1.0178	1	25768	25768		5.7604	0	1				16156	2458	7544	7578	18998	18998					0.08179587874144545
KTTLPGVV	8	Unmodified	_KTTLPGVV_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	407.7545043826103	2	407.755278	813.496004	1.4551	0.00059333	-0.10608	-4.3254E-05	1.349	0.00055007	407.75413458807117	69.844	0.53248	70.167	69.878	70.411	0.32223					25	16	2	0	0	0	0.88504	1	29219	29219		5.7604	0	1	1041600			16157	2458	7544	7578	18999	18999					0.08179587874144545
KTTLPGVV	8	Unmodified	_KTTLPGVV_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	407.755278	813.496004	0.25437	0.00010372	-2.0292	-0.0008274	-1.7748	-0.00072368	407.75394990621396	70.048	0.313	70.048	69.897	70.21	0	-0.11306	-0.00036303	NaN	5.7604	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	626400			16158	2458	7544	7578							0.08179587874144545
KTTLPGVV	8	Unmodified	_KTTLPGVV_					0	0	0		nc|ENSG00000130768|Q92485-2|SMPDL3B;ENST00000548116.5_1_1:28271947-28285346:+|nuORF;ENSG00000130768|ENST00000373894|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	407.755278	813.496004	1.7115	0.00069789	-1.7793	-0.00072553	-0.067765	-2.7632E-05	407.75444072431725	68.902	0.32153	70.268	70.122	70.443	1.3657	0.10721	-0.00015928	NaN	5.7604	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830420			16159	2458	7544	7578							0.08179587874144545
KTTLTGINKN	10	Unmodified	_KTTLTGINKN_					0	0	0		tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	tr|A0A7D6VRL4|A0A7D6VRL4_9CLOTYafYfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3177978396416	2	545.316763	1088.61897	1.4657	0.00079927	0.69295	0.00037787	2.1587	0.0011771	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.89803	1	30670	30670		1.4819	0.28856	1	5427600			16160	16833	7545	7579	19000	19000					0.07820799534783873
KTTRKAKRPL	10	Unmodified	_KTTRKAKRPL_					0	0	0		ENSG00000235699|ENST00000438525|CXorf51B;ENSG00000224440|ENST00000458472|CXorf51A	ENSG00000235699|ENST00000438525|CXorf51B	ENSG00000235699|ENST00000438525|CXorf51B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1278259158134	4	300.44902	1197.76697	-2.8546	-0.00085767	-1.0065	-0.00030242	-3.8612	-0.0011601	300.4483180373318	27.356	0.45685	27.356	27.044	27.501	0					24	14	2	0	0	0	0.12561	1	11356	11356		0	0	1	956080			16161	5285	7546	7580	19001	19001					0.17600155579270904
KTWKLHGL	8	Unmodified	_KTWKLHGL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1993286013603	3	328.199272	981.575986	-0.59112	-0.00019401	2.0316	0.00066675	1.4404	0.00047275	328.1999573456671	31.681	0.39882	32.963	32.773	33.172	1.2813					51	12	5	0	0	0	0.88261	1	13245	13245		5.2969	2.0156	1	84296000	+		16162	10146	7547	7581	19002	19002					0.08446074267976655
KVAAARGR	8	Unmodified	_KVAAARGR_					0	0	0		ENST00000565877.5_1_16:89284207-89284655:+|nuORF	ENST00000565877.5_1_16:89284207-89284655:+|nuORF	ENST00000565877.5_1_16:89284207-89284655:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.7617065310478	2	414.761761	827.508969	1.4773	0.00061275	-1.5462	-0.00064132	-0.068895	-2.8575E-05	414.76118648371573	70.254	1.8125	70.576	70.192	72.005	0.32224					142	57	5	0	0	0	0.89178	2	29381	29381;29511		0.69038	0	1	366180000			16163	7356	7548	7582	19003;19004	19003					0.08831463776891724
KVAATVLQ	8	Unmodified	_KVAATVLQ_					0	0	0		ENSG00000131831|ENST00000451717|RAI2	ENSG00000131831|ENST00000451717|RAI2	ENSG00000131831|ENST00000451717|RAI2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2637817263603	2	415.260728	828.506903	4.4756	0.0018585	3.4556	0.001435	7.9312	0.0032935	415.26214402960363	86.759	0.56892	88.254	88.012	88.581	1.4953					42	18	3	0	0	0	0.89051	1	36563	36563		2.3027	0	1	3362900			16164	2506	7549	7583	19005	19005					0.08578990248417995
KVADLVLML	9	Unmodified	_KVADLVLML_					0	0	0		ENSG00000165733|ENST00000374518|BMS1;BMS1|p.G284Dfs*12|1|0.03|ENSG00000165733|chr10:42792563-42792564|-/ACCT|frameshift_variant;nc|ENSG00000204172|Q5VTM2|AGAP9	ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3084899783134	2	501.306821	1000.59909	3.1267	0.0015674	0.14947	7.4932E-05	3.2761	0.0016424	501.3071620603575	70.663	0.4166	72.017	71.775	72.191	1.3536					19	12	2	0	0	0	0.1109	1	29650	29650		45.7	3.86	1	1479000			16165	3855	7550	7584	19006	19006					0.09881332270435905
KVAKLVRVLSP	11	Unmodified	_KVAKLVRVLSP_					0	0	0		nc|ENSG00000105227|Q9BXM0-2|PRX	nc|ENSG00000105227|Q9BXM0-2|PRX	nc|ENSG00000105227|Q9BXM0-2|PRX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.4063598513603	2	605.405715	1208.79688	3.1307	0.0018953	-2.1759	-0.0013173	0.95475	0.00057801	605.4042926836894	107.42	0.24654	107.58	107.45	107.7	0.15781					43	12	5	0	0	0	1.0131	1	46165	46165		2.9952	2.4705	1	705510000			16166	7848	7551	7585	19007	19007					0.2008309452460253
KVAKPILWSAV	11	Unmodified	_KVAKPILWSAV_					0	0	0		tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.6937744021416	4	303.693221	1210.74378	0.18258	5.5448E-05	1.776	0.00053937	1.9586	0.00059482	303.69369355675894	25.514	0.80056	25.766	25.151	25.951	0.25197					48	25	2	0	0	0	1.0191	3	10650	10587;10650;10701		2.6312	1.4164	1	3340100			16167	16855	7552	7586	19008;19009;19010	19009					0.14683716741933495
KVAKPILWSAV	11	Unmodified	_KVAKPILWSAV_					0	0	0		tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6938354372978	4	303.693221	1210.74378	0.11758	3.571E-05	1.6395	0.00049789	1.757	0.0005336	303.69368568503904	24.255	0.74282	25.496	24.928	25.67	1.241					83	23	4	0	0	0	1.0191	2	10153	10153;10204		2.6312	0.72486	1	3548200			16168	16855	7552	7586	19011;19012	19011					0.14683716741933495
KVAKPILWSAV	11	Unmodified	_KVAKPILWSAV_					0	0	0		tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	tr|A0A7D6VS48|A0A7D6VS48_9CLOTNrampfamilydivalentmetaltransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04260PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.6935302615166	4	303.693221	1210.74378	-0.11669	-3.5439E-05	1.2728	0.00038653	1.1561	0.00035109	303.6935871462227	23.863	0.81911	25.547	24.934	25.753	1.6845					94	26	4	0	0	0	1.0365	2	9957	9957;10010		1.2148	0.76031	1	3746200			16169	16855	7552	7586	19013;19014	19013					0.14683716741933495
KVAQKIQHKNA	11	Unmodified	_KVAQKIQHKNA_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2549316287041	3	422.254328	1263.74115	1.0196	0.00043053	0.90629	0.00038268	1.9259	0.00081321	422.2550698892577	93.304	0.8219	93.304	92.984	93.805	0					57	25	3	0	0	0	1.0191	1	39098	39098		2.6312	0.54523	1	1816300	+		16170	13247	7553	7587	19015	19015					0.11983261336990836
KVCIRRRERK	10	Unmodified	_KVCIRRRERK_					0	0	0		ENST00000397276.6_1_14:23794476-23794560:+|nuORF	ENST00000397276.6_1_14:23794476-23794560:+|nuORF	ENST00000397276.6_1_14:23794476-23794560:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	672.4120971560478	2	672.411872	1342.80919	1.514	0.001018	-2.8279	-0.0019015	-1.3139	-0.00088349	672.410176751047	83.638	0.75861	84.826	84.356	85.115	1.1879					35	23	2	0	0	0	0.1256	1	34937	34937		0.40072	0	1	1067600			16171	6309	7554	7588	19016	19016					0.15149807715965835
KVCLMLLIFA	10	Unmodified	_KVCLMLLIFA_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|84|2|anti-sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|84|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8430663943291	2	575.839974	1149.66539	2.13	0.0012265	4.0548	0.0023349	6.1848	0.0035615	575.8427526825832	73.255	0.79836	73.58	73.371	74.169	0.32494					33	25	2	0	0	0	0.89803	1	30649	30649		1.6526	0.96225	1	1472100	+		16172	14272	7555	7589	19017	19017					0.09654824840845322
KVCPKGVF	8	Unmodified	_KVCPKGVF_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2527648806572	2	439.251849	876.489145	2.7573	0.0012112	1.8516	0.00081331	4.6089	0.0020245	439.25206732274063	72.031	0.48639	73.855	73.57	74.056	1.824					31	15	3	0	0	0	0.89051	1	30237	30237		2.3027	0.4585	1	9800100			16173	17132	7556	7590	19018	19018					0.04595951721921665
KVDDYWEPGK	10	Unmodified	_KVDDYWEPGK_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;CACNA1D-DNAH1|1|fusion	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.8696472048759	3	412.868027	1235.58225	-0.33573	-0.00013861	4.1338	0.0017067	3.7981	0.0015681	412.86972116080335	20.238	0.24632	20.238	20.042	20.288	0					12	7	2	0	0	0	0.86043	1	8410	8410		3.0723	0.81953	1	553680			16174	1884	7557	7591	19019	19019					-0.026114970818525762
KVDKIKKIL	9	Unmodified	_KVDKIKKIL_					0	0	0			REV__ENST00000487720.1_1_7:26887667-26904048:-|nuORF	REV__ENST00000487720.1_1_7:26887667-26904048:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2536804080009	3	362.253265	1083.73797	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.64	1	104.64	104.14	105.14	0								0	0	0	0.42693	1	44213	44213		0.26902	0	1		+		16175	8491	7558	7592	19020	19020					0.19944618230283595
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5364257693291	3	304.535661	910.585153	-0.46878	-0.00014276	3.3121	0.0010086	2.8433	0.00086588	304.53657406525474	13.323	0.21637	13.422	13.312	13.528	0.09944					15	6	3	0	0	0	0.89051	1	5532	5532		1.4819	0	1	1258700	+		16176	9031	7559	7593	19021	19021					0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5363647341728	3	304.535661	910.585153	-0.56679	-0.00017261	3.0356	0.00092445	2.4688	0.00075184	304.5365378183226	12.642	0.21532	13.429	13.331	13.547	0.78751					16	6	3	0	0	0	0.89051	1	5244	5244		1.4819	0	1	875750	+		16177	9031	7559	7593	19022	19022					0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5361511111259	3	304.535661	910.585153	-0.52794	-0.00016078	2.6969	0.00082129	2.1689	0.00066052	304.5362213899266	13.608	0.15108	14.436	14.365	14.516	0.82789					7	4	2	0	0	0	0.89051	1	5650	5650		1.4819	0	1	698060	+		16178	9031	7559	7593	19023	19023					0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2479736208916	3	304.535661	910.585153	-0.50983	-0.00015526	3.1176	0.00094942	2.6078	0.00079416	304.53647561545006	14.043	0.23952	14.871	14.766	15.005	0.82789					22	8	3	0	0	0	2.3239	1	5790	5790		0.40072	0	1	2290100	+		16179	9031	7559	7593	19024	19024					0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.535661	910.585153	-0.41181	-0.00012541	3.6911	0.0011241	3.2793	0.00099865	304.5366778078062	14.42	0.37576	14.533	14.26	14.635	0.11295	0.04776	0.00016952	NaN	1.4819	18	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789570	+		16180	9031	7559	7593							0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	304.535661	910.585153	-0.46878	-0.00014276	3.3121	0.0010086	2.8433	0.00086588	304.53657406525474	13.323	0.21637	13.422	13.312	13.528	0.09944	-0.084937	-0.00024936	NaN	1.4819	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1258700	+		16181	9031	7559	7593							0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	-1.2683	-0.00038626	3.7384	0.0011385	2.47	0.00075222	304.53662159936715	13.761	0.30845	14.488	14.411	14.719	0.72639	0.0019168	0.00021275	NaN	1.4819	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1006600	+		16182	9031	7559	7593							0.1262842283365444
KVDLLVKP	8	Unmodified	_KVDLLVKP_					0	0	0			REV__SOGA1-SAMHD1|2|fusion	REV__SOGA1-SAMHD1|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	-1.3833	-0.00042126	4.3777	0.0013332	2.9944	0.00091191	304.53684677664285	12.944	0.18872	13.67	13.569	13.757	0.72639	0.1628	0.00072422	NaN	1.4819	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570890	+		16183	9031	7559	7593							0.1262842283365444
KVDPEVLL	8	Unmodified	_KVDPEVLL_					0	0	0			REV__ENSG00000141431|ENST00000269197|ASXL3	REV__ENSG00000141431|ENST00000269197|ASXL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.7730285525322	2	456.773668	911.532783	1.7008	0.00077687	-3.3922	-0.0015495	-1.6915	-0.00077262	456.7724016343308	68.604	0.31592	68.604	68.421	68.737	0					16	9	2	0	0	0	0.89051	1	28536	28536		2.3027	0	1	1145900	+		16184	10146	7560	7594	19025	19025					0.07347839700048553
KVFDPVPVGV	10	Unmodified	_KVFDPVPVGV_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.8095580935478	2	528.808042	1055.60153	2.0989	0.0011099	0.11979	6.3348E-05	2.2187	0.0011733	528.8078926445355	50.449	0.28663	50.449	50.277	50.564	0					19	8	3	0	0	0	0.28421	2	21031	21031;21082		40.239	20.982	1	2772100			16185	2688	7561	7595	19026;19027	19026					0.07595503999755238
KVFDPVPVGV	10	Unmodified	_KVFDPVPVGV_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8088256716728	2	528.808042	1055.60153	1.8694	0.00098855	1.3153	0.00069552	3.1846	0.0016841	528.8083580288004	49.917	0.30876	50.247	50.081	50.39	0.33019					23	9	3	0	0	0	0.25725	2	20893	20893;20949		41.956	21.502	1	3302100			16186	2688	7561	7595	19028;19029	19028					0.07595503999755238
KVFDPVPVGV	10	Unmodified	_KVFDPVPVGV_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.8093139529228	2	528.808042	1055.60153	1.333	0.00070488	-0.76858	-0.00040643	0.56438	0.00029845	528.8086312413033	48.582	0.45825	49.97	49.712	50.17	1.388					41	14	4	0	0	0	0.045213	3	20356	20305;20356;20412		83.429	43.479	1	9553700			16187	2688	7561	7595	19030;19031;19032	19031					0.07595503999755238
KVFDPVPVGV	10	Unmodified	_KVFDPVPVGV_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;ENST00000490519.1_1_1:182845328-182845691:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8089477419853	2	528.808042	1055.60153	2.4567	0.0012991	-1.8648	-0.0009861	0.59193	0.00031302	528.807926350752	48.04	0.39924	50.018	49.806	50.206	1.9772					34	12	4	0	0	0	0.049285	2	20144	20100;20144		86.332	38.583	1	7528900			16188	2688	7561	7595	19033;19034	19034					0.07595503999755238
KVFGGFQVV	9	Unmodified	_KVFGGFQVV_					0	0	0		ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	ENSG00000114315|ENST00000232424|HES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.7832214236259	2	490.781828	979.549102	2.6933	0.0013218	1.4221	0.00069792	4.1154	0.0020198	490.7813262119709	47.291	0.31049	49.267	49.094	49.405	1.976					16	9	2	0	0	0	0.19075	2	19789	19789;19836		34.102	7.7612	1	1420600			16189	1856	7562	7596	19035;19036	19035					0.05850965656804874
KVFILWHKLFQ	11	Unmodified	_KVFILWHKLFQ_					0	0	0		ENST00000334344.10_1_12:46243914-46244004:+|nuORF	ENST00000334344.10_1_12:46243914-46244004:+|nuORF	ENST00000334344.10_1_12:46243914-46244004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.9606201052666	3	486.958852	1457.85473	3.3514	0.001632	0.35768	0.00017418	3.7091	0.0018062	486.9590517720984	88.921	2.1704	89.144	88.217	90.387	0.2236					163	67	3	0	0	0	1.0402	1	37117	37117		0.094841	0	1	2885200			16190	5902	7563	7597	19037	19037					0.14411356450000312
KVFILWHKLFQ	11	Unmodified	_KVFILWHKLFQ_					0	0	0		ENST00000334344.10_1_12:46243914-46244004:+|nuORF	ENST00000334344.10_1_12:46243914-46244004:+|nuORF	ENST00000334344.10_1_12:46243914-46244004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.9609252810478	3	486.958852	1457.85473	4.6615	0.00227	0.52913	0.00025766	5.1906	0.0025276	486.9591955423125	87.983	1.5199	89.43	88.594	90.113	1.4467					120	47	3	0	0	0	1.0402	2	37261	37261;37331		0.094841	0	1	2217100			16191	5902	7563	7597	19038;19039	19038					0.14411356450000312
KVFLLPVKKKK	11	Unmodified	_KVFLLPVKKKK_					0	0	0		SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4630615115166	2	664.463033	1326.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.6	1	108.6	108.1	109.1	0								0	0	0	0.63775	1	46821	46821		0	0	1				16192	16018	7564	7598	19040	19040					0.2611340400651443
KVFLLPVKKKK	11	Unmodified	_KVFLLPVKKKK_					0	0	0		SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	SYT1|p.D189V|1|0.11|ENSG00000067715|chr12:79296160-79296160|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4637328982353	2	664.463033	1326.91151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.7	1	108.7	108.2	109.2	0								0	0	0	0.63775	1	46884	46884		0	0	1				16193	16018	7564	7598	19041	19041					0.2611340400651443
KVFLPCDTDH	10	Unmodified	_KVFLPCDTDH_					0	0	0			REV__ENST00000406875.7_1_7:139251457-139251829:-|nuORF	REV__ENST00000406875.7_1_7:139251457-139251829:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	392.1899291872978	3	392.190225	1173.54884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.413	1	54.814	54.314	55.314	1.4005								0	0	0	0.66151	1	22354	22354		1.9064	1.2795	1		+		16194	12902	7565	7599	19042	19042					-0.030988221253892334
KVFQWFWIIQK	11	Unmodified	_KVFQWFWIIQK_					0	0	0			REV__nc|ENSG00000123124|Q9H0M0-6|WWP1	REV__nc|ENSG00000123124|Q9H0M0-6|WWP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2913696169853	3	508.29049	1521.84964	1.9869	0.0010099	-0.44007	-0.00022368	1.5468	0.00078624	508.28961528240274	48.625	0.37648	48.956	48.725	49.101	0.33034					18	11	3	0	0	0	1.039	1	20405	20405		0.45452	0	1	713300	+		16195	9617	7566	7600	19043	19043					0.1095905258739549
KVFVVTRV	8	Unmodified	_KVFVVTRV_					0	0	0		ENSG00000104866|ENST00000221462|PPP1R37;ENST00000540059.1_1_19:45648535-45649727:+|nuORF;ENST00000422370.2_1_19:45648535-45649504:+|nuORF;nc|ENSG00000104866|O75864-2|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37;nc|ENSG00000104866|O75864-2|PPP1R37	ENSG00000104866|ENST00000221462|PPP1R37	MSMS	GG20161007_CRH_Patient100_A02_02	2	474.3075134158134	2	474.30547	946.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.22	1	107.28	106.78	107.78	0.052452								0	0	0	1.0178	1	45823	45823		2.0598	0	1				16196	1484;7847	7567	7601	19044	19044					0.12095244927797921
KVGPVPVLV	9	Unmodified	_KVGPVPVLV_					0	0	0		ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.3033935427666	2	454.302396	906.590239	2.0145	0.00091517	1.0499	0.00047699	3.0644	0.0013922	454.3027369280787	48.077	0.31737	48.077	47.905	48.222	0					20	9	3	0	0	0	0.46905	1	20117	20117		16.942	2.3606	1	750500			16197	1585	7568	7602	19045	19045					0.13320726696269958
KVGPVPVLV	9	Unmodified	_KVGPVPVLV_					0	0	0		ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.3039428591728	2	454.302396	906.590239	2.3278	0.0010575	0.12278	5.5778E-05	2.4506	0.0011133	454.3031441972381	47.504	0.32233	47.835	47.667	47.989	0.33034					18	10	2	0	0	0	0.37357	1	19893	19893		21.747	2.3076	1	1168300			16198	1585	7568	7602	19046	19046					0.13320726696269958
KVGPVPVLV	9	Unmodified	_KVGPVPVLV_					0	0	0		ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.3039733767509	2	454.302396	906.590239	1.8399	0.00083586	-0.74303	-0.00033756	1.0969	0.0004983	454.30243596201086	45.312	0.44053	47.272	47.052	47.493	1.9596					30	13	3	0	0	0	0.37357	1	18959	18959		21.747	2.3076	1	2761600			16199	1585	7568	7602	19047	19047					0.13320726696269958
KVGPVPVLV	9	Unmodified	_KVGPVPVLV_					0	0	0		ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	ENSG00000106803|ENST00000223641|SEC61B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	454.302396	906.590239	2.0611	0.00093638	0.42958	0.00019516	2.4907	0.0011315	454.30269813472887	45.818	0.31128	47.193	47.023	47.334	1.3751	-0.039194	0.00055151	NaN	21.747	25	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3394900			16200	1585	7568	7602							0.13320726696269958
KVGPWLIP	8	Unmodified	_KVGPWLIP_					0	0	0			REV__ENST00000565455.5_1_16:9014297-9015102:-|nuORF	REV__ENST00000565455.5_1_16:9014297-9015102:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2823364138603	2	455.281463	908.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.576	1	35.399	34.899	35.899	1.8227								0	0	0	1.0178	1	14085	14085		0.79363	0	1		+		16201	13935	7569	7603	19048	19048					0.09044171007769819
KVGTPIAII	9	Unmodified	_KVGTPIAII_					0	0	0			REV__ENSG00000198804|ENST00000361624|MT-CO1	REV__ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5364868044853	3	304.535661	910.585153	-0.39424	-0.00012006	2.9245	0.0008906	2.5302	0.00077054	304.536480577642	14.695	0.27902	14.808	14.666	14.945	0.11295					19	8	3	0	0	0	0.83213	1	6100	6100		1.0715	0.61312	1	2593700	+		16202	11739	7570	7604	19049	19049					0.1262842283365444
KVIKVRNG	8	Unmodified	_KVIKVRNG_					0	0	0		tr|A0A7D6ZXT9|A0A7D6ZXT9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22875PE=3SV=1	tr|A0A7D6ZXT9|A0A7D6ZXT9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22875PE=3SV=1	tr|A0A7D6ZXT9|A0A7D6ZXT9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22875PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5365783572197	3	305.202905	912.586885	0.13832	4.2217E-05	2.4096	0.00073541	2.5479	0.00077763	305.2035145688956	24.702	0.81615	25.943	25.424	26.24	1.241					39	26	2	0	0	0	2.3239	1	10216	10216		1.4819	1.0236	1	1488600			16203	17194	7571	7605	19050	19050					0.1270947664227151
KVILLIAIL	9	Unmodified	_KVILLIAIL_					0	0	0		tr|A0A7D7A092|A0A7D7A092_9CLOTLCPfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09060PE=3SV=1	tr|A0A7D7A092|A0A7D7A092_9CLOTLCPfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09060PE=3SV=1	tr|A0A7D7A092|A0A7D7A092_9CLOTLCPfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09060PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	498.3648254275322	2	498.364996	994.715439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.49	1	106.65	106.15	107.15	0.16174								0	0	0	0.42693	1	45554	45554		0.6015	0	1				16204	17219	7572	7606	19051	19051					0.21787018832628746
KVIMLIKYI	9	Unmodified	_KVIMLIKYI_					0	0	0			REV__tr|A0A553SH55|A0A553SH55_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacAPE=3SV=1	REV__tr|A0A553SH55|A0A553SH55_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2442504763603	3	374.243601	1119.70897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.271	1	67.271	66.771	67.771	0								0	0	0	0.42693	1	28020	28020		1.0715	0.10919	1		+		16205	14779	7573	7607	19052	19052					0.1539075760963442
KVIPVYVGV	9	Unmodified	_KVIPVYVGV_					0	0	0		nc|ENSG00000001631|O00522-2|KRIT1;ENST00000486261.5_1_7:91830052-91864980:-|nuORF;ENST00000475770.5_1_7:91830052-91864980:-|nuORF;nc|ENSG00000001631|O00522-3|KRIT1;ENSG00000001631|ENST00000394505|KRIT1	nc|ENSG00000001631|O00522-2|KRIT1	nc|ENSG00000001631|O00522-2|KRIT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3102294802666	2	487.307678	972.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.417	1	45.782	45.282	46.282	1.3653								0	0	0	0.42693	1	18619	18619		4.756	0	1				16206	459	7574	7608	19053	19053					0.11340709350702127
KVIPVYVGV	9	Unmodified	_KVIPVYVGV_					0	0	0		nc|ENSG00000001631|O00522-2|KRIT1;ENST00000486261.5_1_7:91830052-91864980:-|nuORF;ENST00000475770.5_1_7:91830052-91864980:-|nuORF;nc|ENSG00000001631|O00522-3|KRIT1;ENSG00000001631|ENST00000394505|KRIT1	nc|ENSG00000001631|O00522-2|KRIT1	nc|ENSG00000001631|O00522-2|KRIT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.3071166872978	2	487.307678	972.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.866	1	45.809	45.309	46.309	1.9438								0	0	0	0.16797	1	18391	18391		28.487	10.352	1				16207	459	7574	7608	19054	19054					0.11340709350702127
KVIRGQLV	8	Unmodified	_KVIRGQLV_					0	0	0		tr|A0A553SS31|A0A553SS31_NIACIAmidohydrolase-relateddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02240PE=4SV=1	tr|A0A553SS31|A0A553SS31_NIACIAmidohydrolase-relateddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02240PE=4SV=1	tr|A0A553SS31|A0A553SS31_NIACIAmidohydrolase-relateddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02240PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.8643676638603	3	304.871155	911.591636	-3.1307	-0.00095445	1.4209	0.00043318	-1.7098	-0.00052127	304.87042198210276	21.198	0.15351	21.198	21.099	21.252	0					6	4	2	0	0	0	2.3239	1	8783	8783		1.6526	0	1	120470			16208	16591	7575	7609	19055	19055					0.1323036078504174
KVKHKKKHY	9	Unmodified	_KVKHKKKHY_					0	0	0		ENST00000521195.1_1_8:104320096-104343734:+|nuORF;nc|ENSG00000164930|O60353-2|FZD6;ENSG00000164930|ENST00000358755|FZD6	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	ENST00000521195.1_1_8:104320096-104343734:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2522155642509	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.685	1	21.208	20.708	21.708	1.5237								0	0	0	0.42693	1	8180	8180		0.26902	0.033176	1				16209	3803	7576	7610	19056	19056					0.14536787896122405
KVKIDKLHKLI	11	Unmodified	_KVKIDKLHKLI_					0	0	0			REV__nc|ENSG00000187109|P55209-3|NAP1L1	REV__nc|ENSG00000187109|P55209-3|NAP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4783508181572	4	334.477512	1333.88094	0.06351	2.1243E-05	2.206	0.00073787	2.2695	0.00075911	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	1	10201	10201		0.094841	0	1	234860000	+		16210	11527	7577	7611	19057	19057					0.22735625621498912
KVKKRKHK	8	Unmodified	_KVKKRKHK_					0	0	0			REV__chr2:55234204-55234909|120|462.43|0.58|9.65|+|0|RPS27A,None|1	REV__chr2:55234204-55234909|120|462.43|0.58|9.65|+|0|RPS27A,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.2440063357353	3	351.245215	1050.71382	-2.012	-0.0007067	-2.4749	-0.00086931	-4.4869	-0.001576	351.24432803635915	21.748	0.37172	21.748	21.625	21.997	0					31	11	3	0	0	0	0.89187	1	9069	9069		0.40072	0	1	1939300	+		16211	8302	7578	7612	19058	19058					0.1904882258725138
KVKMKFAQ	8	Unmodified	_KVKMKFAQ_					0	0	0			REV__ENST00000513820.1_1_5:118462594-118462864:-|nuORF	REV__ENST00000513820.1_1_5:118462594-118462864:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2921935915947	2	490.291505	978.568457	3.3418	0.0016384	-2.7575	-0.001352	0.58422	0.00028644	490.290415226681	103.41	0.059204	103.59	103.56	103.62	0.18066					8	2	4	0	0	0	0.89051	1	43543	43543		2.3027	1.5091	1	105740000	+		16212	13589	7579	7613	19059	19059					0.07831598676057183
KVKPVHPKK	9	Unmodified	_KVKPVHPKK_					0	0	0		ENST00000495327.1_1_7:127953176-127954962:-|nuORF;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.N724Kfs*2|1|0.2|ENSG00000106344|chr7:128310905-128310906|-/C|frameshift_variant;ENSG00000106344|ENST00000223073|RBM28	ENST00000495327.1_1_7:127953176-127954962:-|nuORF	ENST00000495327.1_1_7:127953176-127954962:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8546020388603	2	530.853119	1059.69168	3.1871	0.0016919	-2.461	-0.0013064	0.72616	0.00038548	530.8518555269743	107.57	0.22183	107.73	107.6	107.83	0.15781					47	11	5	0	0	0	0.83213	1	46256	46256		2.0598	1.3694	1	1952299999.9999998			16213	1567	7580	7614	19060	19060					0.16422598118833776
KVKPVHPKK	9	Unmodified	_KVKPVHPKK_					0	0	0		ENST00000495327.1_1_7:127953176-127954962:-|nuORF;nc|ENSG00000106344|Q9NW13-2|RBM28;RBM28|p.N724Kfs*2|1|0.2|ENSG00000106344|chr7:128310905-128310906|-/C|frameshift_variant;ENSG00000106344|ENST00000223073|RBM28	ENST00000495327.1_1_7:127953176-127954962:-|nuORF	ENST00000495327.1_1_7:127953176-127954962:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	530.853119	1059.69168	1.2699	0.00067416	0.083708	4.4436E-05	1.3537	0.00071859	530.8529917925797	107.61	0.19257	107.61	107.51	107.7	0	-0.042944	0.0013387	NaN	2.0598	33	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	301910000			16214	1567	7580	7614							0.16422598118833776
KVKYEDWSVH	10	Unmodified	_KVKYEDWSVH_					0	0	0			REV__nc|ENSG00000078808|Q9BRK5-4|SDF4	REV__nc|ENSG00000078808|Q9BRK5-4|SDF4	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2758	1	7.0065	6.5065	7.5065	0.73074								0	0	0	0.66222	1	2603	2603		0.69767	0.24315	1		+		16215	8791	7581	7615	19061	19061					0.0072018456346540916
KVLAAGVVPLL	11	Unmodified	_KVLAAGVVPLL_					0	0	0		ENSG00000128342|ENST00000249075|LIF	ENSG00000128342|ENST00000249075|LIF	ENSG00000128342|ENST00000249075|LIF	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3647338747978	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.349	1	28.349	27.849	28.849	0								0	0	0	0.63775	1	11863	11863		1.4819	0	1				16216	2366	7582	7616	19062	19062					0.17520929338934366
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.3129150271416	2	574.310949	1146.60735	2.0142	0.0011568	0.55449	0.00031845	2.5687	0.0014752	574.3112939573708	62.167	0.80981	62.167	61.96	62.77	0					61	25	4	0	0	0	3.1987E-07	4	25920	25873;25920;25960;26015		191.38	123.3	1	5748700			16217	1166	7583	7617	19063;19064;19065;19066	19064					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.3126708865166	2	574.310949	1146.60735	1.8908	0.0010859	0.65572	0.00037659	2.5465	0.0014625	574.311128025445	61.608	0.77664	61.938	61.671	62.448	0.32974					69	24	4	0	0	0	1.5898E-05	5	25843	25741;25789;25843;25910;25964		176.84	108.76	1	6914800			16218	1166	7583	7617	19067;19068;19069;19070;19071	19069					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3123657107353	2	574.310949	1146.60735	2.9245	0.0016796	0.63727	0.00036599	3.5618	0.0020456	574.3108781296918	60.411	0.58475	61.831	61.536	62.121	1.4196					58	18	4	0	0	0	1.5898E-05	3	25393	25302;25350;25393		176.84	108.76	1	20320000			16219	1166	7583	7617	19072;19073;19074	19074					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2105590701103	3	383.209725	1146.60735	2.2196	0.00085057	0.12106	4.639E-05	2.3407	0.00089696	383.2096738297192	60.404	0.87437	61.824	61.566	62.441	1.4196					61	27	4	0	0	0	0.079895	1	25382	25382		51.415	34.849	1	9451900			16220	1166	7583	7617	19075	19075					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3123046755791	2	574.310949	1146.60735	3.0458	0.0017493	0.89641	0.00051482	3.9422	0.0022641	574.3110072461945	59.934	0.52636	61.903	61.582	62.108	1.969					53	16	4	0	0	0	3.5488E-16	3	25094	25094;25141;25187		223.06	153.95	1	19263000			16221	1166	7583	7617	19076;19077;19078	19076					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	383.2106811404228	3	383.209725	1146.60735	2.7648	0.0010595	0.12252	4.6953E-05	2.8873	0.0011064	383.2097336366364	59.879	0.58915	61.848	61.582	62.171	1.969					53	18	4	0	0	0	0.031145	1	25116	25116		69.338	48.924	1	7515800			16222	1166	7583	7617	19079	19079					0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	383.209725	1146.60735	0.16062	6.155E-05	0.86813	0.00033268	1.0287	0.00039423	383.20959905070475	62.196	0.46844	62.196	61.96	62.429	0	0.25635	0.00078038	NaN	69.338	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3683900			16223	1166	7583	7617							0.03990602511407815
KVLDFEHFL	9	Unmodified	_KVLDFEHFL_					0	0	0		ENST00000548725.5_1_12:56552185-56553955:+|nuORF;nc|ENSG00000092841|P60660-2|MYL6;ENSG00000092841|ENST00000550697|MYL6	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	ENST00000548725.5_1_12:56552185-56553955:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	383.209725	1146.60735	1.9465	0.00074593	-0.34518	-0.00013228	1.6013	0.00061365	383.2092198610525	61.562	0.80669	61.892	61.641	62.448	0.32974	-0.048275	-0.00061448	NaN	69.338	51	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4085000			16224	1166	7583	7617							0.03990602511407815
KVLDLKINL	9	Unmodified	_KVLDLKINL_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion;VPS13A|p.L994Wfs*11|1|0.35|ENSG00000197969|chr9:77282135-77282135|T/-|frameshift_variant	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3461791872978	2	528.344792	1054.67503	1.7014	0.00089891	0.28604	0.00015113	1.9874	0.00105	528.3456687290626	49.151	0.28233	50.542	50.421	50.704	1.3911					16	8	3	0	0	0	0.46566	1	20609	20609		17.113	2.2746	1	1041100			16225	5034	7584	7618	19080	19080					0.14988052442208755
KVLDLKINL	9	Unmodified	_KVLDLKINL_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion;VPS13A|p.L994Wfs*11|1|0.35|ENSG00000197969|chr9:77282135-77282135|T/-|frameshift_variant	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	528.344792	1054.67503	2.1377	0.0011295	-0.75329	-0.000398	1.3844	0.00073147	528.3445738679028	48.584	0.24686	50.562	50.422	50.669	1.9772	0.0096895	-0.00051882	NaN	17.113	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1113000			16226	5034	7584	7618							0.14988052442208755
KVLDVLWEL	9	Unmodified	_KVLDVLWEL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.8285400271416	2	557.828975	1113.6434	1.3221	0.00073749	1.2262	0.000684	2.5482	0.0014215	557.8292381516342	80.191	0.34455	80.191	80.009	80.354	0					16	10	2	0	0	0	0.66458	1	33412	33412		8.7454	0.15213	1	311280			16227	3616	7585	7619	19081	19081					0.09112059688254703
KVLDVLWEL	9	Unmodified	_KVLDVLWEL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8299438357353	2	557.828975	1113.6434	2.7117	0.0015127	-0.66954	-0.00037349	2.0421	0.0011392	557.8283219765607	78.627	0.52654	79.894	79.666	80.193	1.2668					39	16	3	0	0	0	0.16939	2	33015	32965;33015		36.506	9.6225	1	2030800			16228	3616	7585	7619	19082;19083	19083					0.09112059688254703
KVLDVLWEL	9	Unmodified	_KVLDVLWEL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8300048708916	2	557.828975	1113.6434	1.8109	0.0010102	-0.7487	-0.00041765	1.0622	0.00059251	557.8283739597048	78.044	0.59066	79.796	79.622	80.213	1.7514					39	18	3	0	0	0	0.099302	1	32751	32751		49.554	13.427	1	1776000			16229	3616	7585	7619	19084	19084					0.09112059688254703
KVLGIVFFV	9	Unmodified	_KVLGIVFFV_					0	0	0		ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.3270141482353	2	511.325871	1020.63719	2.2543	0.0011527	0.39376	0.00020134	2.6481	0.001354	511.32606110148055	81.487	0.68909	81.487	81.226	81.915	0					79	22	5	0	0	0	0.84963	1	33866	33866		0.6015	0	1	172960000			16230	3178	7586	7620	19085	19085					0.12769586247418374
KVLGIVFFV	9	Unmodified	_KVLGIVFFV_					0	0	0		ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3280822634697	2	511.325871	1020.63719	2.2048	0.0011274	0.6594	0.00033717	2.8642	0.0014646	511.32624775614283	81.37	0.76203	81.661	81.338	82.1	0.29056					80	24	5	0	0	0	0.84963	1	33913	33913		0.6015	0.6015	1	201660000			16231	3178	7586	7620	19086	19086					0.12769586247418374
KVLGIVFFV	9	Unmodified	_KVLGIVFFV_					0	0	0		ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	ENSG00000147246|ENST00000276198|HTR2C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	511.325871	1020.63719	2.2543	0.0011527	0.39376	0.00020134	2.6481	0.001354	511.32606110148055	81.487	0.68909	81.487	81.226	81.915	0	-0.22459	-0.00049165	NaN	0.6015	79	22	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172960000			16232	3178	7586	7620							0.12769586247418374
KVLGIVVGV	9	Unmodified	_KVLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.3020812869072	2	442.302396	882.590239	1.6548	0.00073193	0.048651	2.1519E-05	1.7035	0.00075345	442.3019566023125	51.411	0.21607	51.411	51.292	51.508	0					10	6	2	0	0	0	0.27148	1	21434	21434		26.884	3.7352	1	495930			16233	2249	7587	7621	19087	19087					0.14424726696279322
KVLGIVVGV	9	Unmodified	_KVLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.3032104372978	2	442.302396	882.590239	2.2327	0.00098752	0.3801	0.00016812	2.6128	0.0011556	442.3022195577434	49.423	0.42974	50.814	50.612	51.042	1.3911					26	13	3	0	0	0	0.15635	1	20685	20685		37.974	1.9298	1	2454800			16234	2249	7587	7621	19088	19088					0.14424726696279322
KVLGIVVGV	9	Unmodified	_KVLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.3034850955009	2	442.302396	882.590239	1.9758	0.00087392	0.2213	9.7881E-05	2.1971	0.0009718	442.3022770120789	48.86	0.30925	50.837	50.669	50.978	1.9772					21	9	3	0	0	0	0.13873	2	20444	20444;20501		39.957	11.47	1	2391200			16235	2249	7587	7621	19089;19090	19089					0.14424726696279322
KVLNDIKLP	9	Unmodified	_KVLNDIKLP_					0	0	0			REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L	REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2200195193291	3	347.221853	1038.64373	-1.0492	-0.00036429	-4.0022	-0.0013897	-5.0514	-0.001754	347.2207496599883	47.585	0.46765	47.585	47.371	47.839	0					38	14	3	0	0	0	0.77876	1	19899	19899		4.1895	1.691	1	2693100	+		16236	10689	7588	7622	19091	19091					0.12595479408105348
KVLNDIKLP	9	Unmodified	_KVLNDIKLP_					0	0	0			REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L	REV__nc|ENSG00000163521|Q6UWU2-2|GLB1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	347.221853	1038.64373	-1.0492	-0.00036429	-4.0022	-0.0013897	-5.0514	-0.001754	347.2207496599883	47.585	0.46765	47.585	47.371	47.839	0	0.090161	-0.00021946	NaN	4.1895	38	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2693100	+		16237	10689	7588	7622							0.12595479408105348
KVLPCLHT	8	Unmodified	_KVLPCLHT_					0	0	0		nc|ENSG00000110171|O75382-3|TRIM3;nc|ENSG00000110171|O75382-2|TRIM3;ENSG00000110171|ENST00000345851|TRIM3;TRIM2|p.G665Efs*11|1|0.47|ENSG00000109654|chr4:153328581-153328581|G/-|frameshift_variant;nc|ENSG00000109654|Q9C040|TRIM2;ENSG00000109654|ENST00000338700|TRIM2	nc|ENSG00000110171|O75382-3|TRIM3	nc|ENSG00000110171|O75382-3|TRIM3	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1762267947197	3	304.177479	909.510608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.71	1	101.71	101.21	102.21	0								0	0	0	1.0178	1	42594	42594		0.40072	0	1				16238	1699	7589	7623	19092	19092					0.052233367506119066
KVLQILFV	8	Unmodified	_KVLQILFV_					0	0	0			REV__nc|ENSG00000211806|A0A0B4J276|TRAV25	REV__nc|ENSG00000211806|A0A0B4J276|TRAV25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.3192321658134	2	480.318046	958.621539	3.0437	0.0014619	-0.61686	-0.00029629	2.4268	0.0011656	480.31771815197754	70.342	0.44603	71.695	71.491	71.937	1.3536					31	13	3	0	0	0	0.68174	1	29492	29492		32.117	1.8922	1	5004600	+		16239	14532	7590	7624	19093	19093					0.14057299730382056
KVLQILFV	8	Unmodified	_KVLQILFV_					0	0	0			REV__nc|ENSG00000211806|A0A0B4J276|TRAV25	REV__nc|ENSG00000211806|A0A0B4J276|TRAV25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.3198119997978	2	480.318046	958.621539	2.7595	0.0013254	-0.043252	-2.0775E-05	2.7162	0.0013046	480.3178758677074	69.759	0.44456	71.597	71.404	71.849	1.8378					30	13	3	0	0	0	0.76103	1	29241	29241		24.674	1.5255	1	3918500	+		16240	14532	7590	7624	19094	19094					0.14057299730382056
KVLVAKIKALL	11	Unmodified	_KVLVAKIKALL_					0	0	0		tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4294311404228	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.68	1	106.84	106.34	107.34	0.16174								0	0	0	0.63775	1	45684	45684		0.35063	0.35063	1				16241	17130	7591	7625	19095	19095					0.253137397068258
KVLVITKAT	9	Unmodified	_KVLVITKAT_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.6462280154228	1	972.645194	971.637917	3.0174	0.0029349	-1.6567	-0.0016114	1.3607	0.0013235	972.6432325243493	106.07	0.17654	106.23	106.15	106.33	0.16174					32	9	5	0	0	0	0.83213	1	45258	45258		2.0598	0	1	342190000	+		16242	10655	7592	7626	19096	19096					0.15096380896443407
KVLVITKAT	9	Unmodified	_KVLVITKAT_					0	0	0			REV__nc|ENSG00000162688|P35573-2|AGL	REV__nc|ENSG00000162688|P35573-2|AGL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	972.645194	971.637917	3.0174	0.0029349	-1.6567	-0.0016114	1.3607	0.0013235	972.6432325243493	106.07	0.17654	106.23	106.15	106.33	0.16174	0.01878	-0.00071818	NaN	2.0598	32	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342190000	+		16243	10655	7592	7626							0.15096380896443407
KVLVLDTDYK	10	Unmodified	_KVLVLDTDYK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.5638610720634	3	398.564056	1192.67034	-0.37187	-0.00014821	1.6456	0.00065588	1.2737	0.00050766	398.5648310118221	28.469	0.37157	28.469	28.287	28.659	0					18	11	2	0	0	0	0.77604	1	11933	11933		14.838	8.6461	1	851620		+	16244	339	7593	7627	19097	19097					0.0817112350878233
KVNLKIWVKVR	11	Unmodified	_KVNLKIWVKVR_					0	0	0		tr|A0A7D6VQT4|A0A7D6VQT4_9CLOTGTPaseEraOS=ClostridiumintestinaleOX=36845GN=eraPE=3SV=1	tr|A0A7D6VQT4|A0A7D6VQT4_9CLOTGTPaseEraOS=ClostridiumintestinaleOX=36845GN=eraPE=3SV=1	tr|A0A7D6VQT4|A0A7D6VQT4_9CLOTGTPaseEraOS=ClostridiumintestinaleOX=36845GN=eraPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	347.2064391970634	4	346.48032	1381.89217	1.65	0.00057171	2.4577	0.00085153	4.1077	0.0014232	346.480820368465	40.464	0.28242	42.326	42.171	42.453	1.8624					13	8	3	0	0	0	0.14606	1	16980	16980		1.3296	0	1	794780			16245	16808	7594	7628	19098	19098					0.21650447715614973
KVNSKIKLT	9	Unmodified	_KVNSKIKLT_					0	0	0		tr|A0A7D7A2J5|A0A7D7A2J5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17270PE=4SV=1	tr|A0A7D7A2J5|A0A7D7A2J5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17270PE=4SV=1	tr|A0A7D7A2J5|A0A7D7A2J5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2272216677666	3	344.225486	1029.65463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.689	1	45.016	44.516	45.516	0.32674								0	0	0	0.42693	1	18766	18766		1.1933	0.12188	1				16246	17257	7595	7629	19099	19099					0.140988817824109
KVNSVRPN	8	Unmodified	_KVNSVRPN_					0	0	0			REV__MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	REV__MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.8646423220634	3	305.178648	912.514114	-0.12493	-3.8126E-05	1.9817	0.00060477	1.8568	0.00056665	305.17972236948594	23.589	0.42337	25.24	24.93	25.354	1.6511					23	13	2	0	0	0	2.3239	1	9741	9741		3.2813	0	1	149370	+		16247	9145	7596	7630	19100	19100					0.05435722848858404
KVPFFRKRKHH	11	Unmodified	_KVPFFRKRKHH_					0	0	0		ENSG00000143125|ENST00000271331|PROK1	ENSG00000143125|ENST00000271331|PROK1	ENSG00000143125|ENST00000271331|PROK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9655029177666	3	493.965112	1478.87351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7335	1	6.7335	6.2335	7.2335	0								0	0	0	0.63775	1	2766	2766		0.094841	0	1				16248	3014	7597	7631	19101	19101					0.1532233086445558
KVPFILLL	8	Unmodified	_KVPFILLL_					0	0	0		tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.8237487673759	2	471.822964	941.631375	1.7386	0.00082033	1.0016	0.00047258	2.7403	0.0012929	471.82335156703397	109.64	0.71109	109.64	109.37	110.08	0					76	27	4	0	0	0	0.89178	2	47445	47445;47501		0.69038	0	1	11719000			16249	17091	7598	7632	19102;19103	19102					0.15822487735772484
KVPFILLL	8	Unmodified	_KVPFILLL_					0	0	0		tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	471.822964	941.631375	3.4914	0.0016473	-0.68637	-0.00032384	2.805	0.0013235	471.82282846278713	109.61	0.72376	109.66	109.38	110.11	0.048851	0.009685	-0.00078112	NaN	0.69038	59	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8621600			16250	17091	7598	7632							0.15822487735772484
KVPFLLHFIHF	11	Unmodified	_KVPFLLHFIHF_					0	0	0		chr8:127290060-127311920|177|24.08|0.02|9.95|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|55;chr8:127290060-127311835|201|15.36|0.0|11.84|-|1|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|55	chr8:127290060-127311920|177|24.08|0.02|9.95|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|55	chr8:127290060-127311920|177|24.08|0.02|9.95|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|55	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.6095764040947	3	466.607931	1396.80196	2.8575	0.0013333	0.84529	0.00039442	3.7028	0.0017278	466.60804134969914	85.084	1.703	85.084	84.399	86.103	0					87	53	2	0	0	0	1.0362	1	35671	35671		0.45452	0	1	1342500			16251	286	7599	7633	19104	19104					0.11943398387211346
KVPFLPVLPIL	11	Unmodified	_KVPFLPVLPIL_					0	0	0		ENSG00000139514|ENST00000380752|SLC7A1	ENSG00000139514|ENST00000380752|SLC7A1	ENSG00000139514|ENST00000380752|SLC7A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.6093017458916	3	412.609049	1234.80532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.641	1	34.916	34.416	35.416	1.2746								0	0	0	0.63775	1	14114	14114		1.3296	0.11481	1				16252	2879	7600	7634	19105	19105					0.19730648441236553
KVPPFTFHV	9	Unmodified	_KVPPFTFHV_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1;nc|ENSG00000177469|Q6NZI2-3|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3051635622978	2	536.302927	1070.5913	2.5872	0.0013875	-0.58409	-0.00031325	2.0031	0.0010743	536.3020047602088	44.12	1.4626	45.474	45.315	46.778	1.3536					82	45	2	0	0	0	0.33297	3	18496	18496;18601;18794		32.305	19.263	1	1695900			16253	4447	7601	7635	19106;19107;19108	19106					0.05882941065169689
KVPPFTFHV	9	Unmodified	_KVPPFTFHV_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1;nc|ENSG00000177469|Q6NZI2-3|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3027221560478	2	536.302927	1070.5913	2.1785	0.0011683	1.4315	0.00076773	3.61	0.0019361	536.3041551906354	43.036	1.9062	44.957	44.694	46.6	1.9211					100	61	3	0	0	0	0.3091	2	18274	18200;18274		32.305	19.263	1	3738100			16254	4447	7601	7635	19109;19110	19110					0.05882941065169689
KVPQLEIVPN	10	Unmodified	_KVPQLEIVPN_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8395263552666	2	568.837331	1135.66011	1.5261	0.00086809	2.0827	0.0011847	3.6088	0.0020528	568.8381270227729	43.238	0.33812	43.238	43.057	43.395	0					22	10	3	0	0	0	0.76954	2	18128	18077;18128		15.248	2.206	1	1350000		+	16255	335	7602	7636	19111;19112	19112					0.09770560574224874
KVPQLEIVPN	10	Unmodified	_KVPQLEIVPN_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8373290896416	2	568.837331	1135.66011	1.6684	0.00094902	0.29877	0.00016995	1.9671	0.001119	568.8372587670023	42.759	0.2852	43.08	42.911	43.196	0.32058					20	9	3	0	0	0	0.76954	1	17975	17975		15.248	0.41021	1	1764400		+	16256	335	7602	7636	19113	19113					0.09770560574224874
KVPQLEIVPN	10	Unmodified	_KVPQLEIVPN_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8387328982353	2	568.837331	1135.66011	2.3838	0.001356	1.3182	0.00074983	3.702	0.0021058	568.8371556333498	41.103	0.34568	42.428	42.241	42.587	1.3254					24	10	3	0	0	0	0.58279	1	17226	17226		23.79	5.4167	1	2249400		+	16257	335	7602	7636	19114	19114					0.09770560574224874
KVPQLEIVPN	10	Unmodified	_KVPQLEIVPN_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8374511599541	2	568.837331	1135.66011	2.1372	0.0012157	1.5288	0.00086964	3.666	0.0020854	568.8370216812477	40.719	0.31546	42.611	42.452	42.768	1.8927					22	9	3	0	0	0	0.76954	2	17098	17030;17098		15.248	4.393	1	1602100		+	16258	335	7602	7636	19115;19116	19116					0.09770560574224874
KVPTVKKPET	10	Unmodified	_KVPTVKKPET_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2330200076103	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.606	1	65.933	65.433	66.433	0.32689								0	0	0	0.66218	1	27470	27470		0.77653	0.078866	1				16259	3425	7603	7637	19117	19117					0.11794847091277916
KVQWLLGKT	9	Unmodified	_KVQWLLGKT_					0	0	0		ENST00000473969.6_1_1:161011981-161012658:-|nuORF;ENST00000368021.7_1_1:161012003-161012658:-|nuORF;ENST00000529476.1_1_1:161011629-161012658:-|nuORF	ENST00000473969.6_1_1:161011981-161012658:-|nuORF	ENST00000473969.6_1_1:161011981-161012658:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2229797244072	3	358.221965	1071.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.593	1	90.997	90.497	91.497	1.4045								0	0	0	0.42693	1	37746	37746		1.1933	0.12188	1				16260	6078	7604	7638	19118	19118					0.11110899127993434
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1992370486259	4	303.199536	1208.76904	-2.6152	-0.00079291	1.1154	0.00033818	-1.4998	-0.00045474	303.19974912720943	33.008	0.91563	33.008	32.318	33.233	0					92	30	4	0	0	0	0.8974	1	13785	13785		1.7423	0.7287	1	5247200	+		16261	13950	7605	7639	19119	19119					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.4488403201103	4	303.199536	1208.76904	-2.5261	-0.0007659	-1.9342	-0.00058645	-4.4603	-0.0013524	303.44962817811614	35.148	0.22374	35.148	34.995	35.219	0					22	15	2	0	0	0	0.89803	1	14736	14736		1.5923	0.63001	1	4497600	+		16262	13950	7605	7639	19120	19120					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1993591189384	4	303.199536	1208.76904	0.54996	0.00016675	-1.2479	-0.00037835	-0.69791	-0.00021161	303.19913081222427	32.184	0.80636	32.478	31.999	32.805	0.29431					87	25	4	0	0	0	0.88278	2	13538	13487;13538		3.3196	2.622	1	6378000	+		16263	13950	7605	7639	19121;19122	19122					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1985961794853	4	303.199536	1208.76904	0.68022	0.00020624	-2.7098	-0.00082161	-2.0296	-0.00061537	303.1984799130308	34.605	0.46489	34.904	34.632	35.097	0.29941					56	19	4	0	0	0	0.8974	2	14541	14477;14541		1.7423	0.63001	1	4534800	+		16264	13950	7605	7639	19123;19124	19124					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1993591189384	4	303.199536	1208.76904	-0.51729	-0.00015684	-0.77704	-0.0002356	-1.2943	-0.00039244	303.1992700376234	31.109	1.0006	32.39	31.624	32.625	1.2813					104	31	4	0	0	0	0.8974	2	12968	12918;12968		1.7423	1.0446	1	6480500	+		16265	13950	7605	7639	19125;19126	19126					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1989623904228	4	303.199536	1208.76904	-0.59179	-0.00017943	-2.2758	-0.00069001	-2.8676	-0.00086944	303.198840787667	31.777	0.5769	33.058	32.625	33.202	1.2813					51	18	3	0	0	0	0.88278	1	13336	13336		3.3196	1.5774	1	6776900	+		16266	13950	7605	7639	19127	19127					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1988708376884	4	303.199536	1208.76904	-0.66003	-0.00020012	-2.0993	-0.00063651	-2.7594	-0.00083664	303.19880336818323	32.401	0.78024	33.679	33.168	33.949	1.2782					60	26	4	0	0	0	0.89803	1	13621	13621		1.5923	0.37745	1	7402200	+		16267	13950	7605	7639	19128	19128					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1992370486259	4	303.199536	1208.76904	0.14694	4.4551E-05	-1.7074	-0.00051768	-1.5605	-0.00047313	303.19895195926824	30.339	0.86665	32.154	31.676	32.543	1.8151					98	27	4	0	0	0	0.88278	1	12747	12747		3.3196	1.99	1	7320700	+		16268	13950	7605	7639	19129	19129					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1991760134697	4	303.199536	1208.76904	0.17378	5.269E-05	-2.3613	-0.00071593	-2.1875	-0.00066324	303.1987753914413	31.467	0.77247	33.292	33.075	33.848	1.8246					78	28	4	0	0	0	0.8974	1	13177	13177		1.7423	0.8779	1	10885000	+		16269	13950	7605	7639	19130	19130					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1977722048759	4	303.199536	1208.76904	0.16026	4.859E-05	-2.7241	-0.00082596	-2.5639	-0.00077737	303.1985862636281	32.312	0.76095	34.136	33.818	34.579	1.8246					68	28	4	0	0	0	0.88031	1	13701	13701		3.5871	2.2574	1	6319200	+		16270	13950	7605	7639	19131	19131					0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	303.199536	1208.76904	0.68022	0.00020624	-2.7098	-0.00082161	-2.0296	-0.00061537	303.1984799130308	34.605	0.46489	34.904	34.632	35.097	0.29941	0.0021888	-0.0007014	NaN	1.7423	56	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4534800	+		16271	13950	7605	7639							0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	303.199536	1208.76904	-0.59179	-0.00017943	-2.2758	-0.00069001	-2.8676	-0.00086944	303.198840787667	31.777	0.5769	33.058	32.625	33.202	1.2813	0.025211	-0.0018661	NaN	3.3196	51	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6776900	+		16272	13950	7605	7639							0.1730062910773995
KVRGPRKRGR	10	Unmodified	_KVRGPRKRGR_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	303.199536	1208.76904	0.15151	4.5938E-05	-0.084467	-2.561E-05	0.067045	2.0328E-05	303.199975850462	32.829	0.15417	34.654	34.55	34.704	1.8246	-0.24793	0.0024826	NaN	1.7423	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5362400	+		16273	13950	7605	7639							0.1730062910773995
KVRIFTYLIG	10	Unmodified	_KVRIFTYLIG_					0	0	0		CACNA2D3-TEX264|1|fusion;ENSG00000157445|ENST00000474759|CACNA2D3;nc|ENSG00000157445|Q8IZS8-3|CACNA2D3;nc|ENSG00000157445|Q8IZS8-2|CACNA2D3	CACNA2D3-TEX264|1|fusion	CACNA2D3-TEX264|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1897460818291	4	303.189309	1208.72813	0.26136	7.9241E-05	0.5785	0.0001754	0.83986	0.00025464	303.1890891211663	26.91	0.76799	27.171	26.592	27.36	0.26173					69	24	5	0	0	0	0.89803	1	11251	11251		1.5923	0.37745	1	3783900			16274	112	7606	7640	19132	19132					0.13211430224873766
KVRIFTYLIG	10	Unmodified	_KVRIFTYLIG_					0	0	0		CACNA2D3-TEX264|1|fusion;ENSG00000157445|ENST00000474759|CACNA2D3;nc|ENSG00000157445|Q8IZS8-3|CACNA2D3;nc|ENSG00000157445|Q8IZS8-2|CACNA2D3	CACNA2D3-TEX264|1|fusion	CACNA2D3-TEX264|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1888610720634	4	303.189309	1208.72813	0.020313	6.1588E-06	-0.68912	-0.00020893	-0.66881	-0.00020277	303.1888239577971	25.8	0.37154	27.06	26.832	27.204	1.2594					35	11	4	0	0	0	0.89803	1	10813	10813		1.5923	0	1	3613200			16275	112	7606	7640	19133	19133					0.13211430224873766
KVRIFTYLIG	10	Unmodified	_KVRIFTYLIG_					0	0	0		CACNA2D3-TEX264|1|fusion;ENSG00000157445|ENST00000474759|CACNA2D3;nc|ENSG00000157445|Q8IZS8-3|CACNA2D3;nc|ENSG00000157445|Q8IZS8-2|CACNA2D3	CACNA2D3-TEX264|1|fusion	CACNA2D3-TEX264|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1889221072197	4	303.189309	1208.72813	-0.052828	-1.6017E-05	-0.45279	-0.00013728	-0.50562	-0.0001533	303.188835255625	25.358	0.64022	27.074	26.635	27.276	1.7167					64	20	5	0	0	0	0.89803	1	10607	10607		1.5923	0	1	5586400			16276	112	7606	7640	19134	19134					0.13211430224873766
KVRIVGSR	8	Unmodified	_KVRIVGSR_					0	0	0			REV__ENST00000417982.6_1_17:53851072-53853458:+|nuORF	REV__ENST00000417982.6_1_17:53851072-53853458:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.8650695681572	3	305.534654	913.582134	-2.9609	-0.00090465	4.4419	0.0013572	1.481	0.00045251	305.537593018996	25.009	0.15231	25.009	24.92	25.072	0					6	4	2	0	0	0	2.3239	1	10445	10445		0.45834	0	1	118350	+		16277	10138	7607	7641	19135	19135					0.12188592499512652
KVRPPHVE	8	Unmodified	_KVRPPHVE_					0	0	0			REV__ENSG00000152669|ENST00000282572|CCNO	REV__ENSG00000152669|ENST00000282572|CCNO	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2858459353447	2	481.282526	960.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.653	1	89.148	88.648	89.648	1.4953								0	0	0	1.0178	1	36951	36951		2.3027	1.5091	1		+		16278	10430	7608	7642	19136	19136					0.06864599745563282
KVRQLLREKHK	11	Unmodified	_KVRQLLREKHK_					0	0	0		ASPM|p.A2546V|1|0.07|ENSG00000066279|chr1:197101614-197101614|G/A|missense_variant	ASPM|p.A2546V|1|0.07|ENSG00000066279|chr1:197101614-197101614|G/A|missense_variant	ASPM|p.A2546V|1|0.07|ENSG00000066279|chr1:197101614-197101614|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4820739626884	4	359.480852	1433.8943	0.28112	0.00010106	3.0943	0.0011123	3.3754	0.0012134	359.4817495297129	26.46	0.88989	28.207	28.036	28.926	1.747					58	29	3	0	0	0	0.9945	2	11081	11032;11081		4.1166	2.9018	1	24272000			16279	82	7609	7643	19137;19138	19138					0.19470876453419805
KVRRRKGH	8	Unmodified	_KVRRRKGH_					0	0	0		tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2227661013603	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.477	1	76.477	75.977	76.977	0								0	0	0	1.0178	1	31839	31839		0.45834	0	1				16280	17034	7610	7644	19139	19139					0.1362131060784577
KVRRRKGH	8	Unmodified	_KVRRRKGH_					0	0	0		tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2237121462822	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.211	1	93.211	92.711	93.711	0								0	0	0	1.0178	1	38959	38959		0.45834	0	1				16281	17034	7610	7644	19140	19140					0.1362131060784577
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2427245974541	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.923	1	19.116	18.616	19.616	0.19342								0	0	0	0.42693	1	7857	7857		1.0715	0.80244	1				16282	3361	7611	7645	19141	19141					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2419006228447	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.692	1	22.925	22.425	23.425	0.23306								0	0	0	0.42693	1	9458	9458		0.23584	0	1				16283	3361	7611	7645	19142	19142					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2428771853447	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.932	1	23.165	22.665	23.665	0.23306								0	0	0	0.42693	1	9564	9564		0.96228	0.69326	1				16284	3361	7611	7645	19143	19143					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	351.2010681033134	3	351.241471	1050.70258	0.45456	0.00015966	3.1433	0.0011041	3.5979	0.0012637	351.2423009265748	24.169	0.73068	24.411	24.043	24.774	0.24251					34	23	2	0	0	0	0.11954	1	10184	10184		0.26902	0	1	713860			16285	3361	7611	7645	19144	19144					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2423889040947	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.155	1	23.332	22.832	23.832	1.177								0	0	0	0.42693	1	9260	9260		0.23584	0	1				16286	3361	7611	7645	19145	19145					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2439147830009	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.273	1	23.45	22.95	23.95	1.177								0	0	0	0.42693	1	9309	9309		0.23584	0	1				16287	3361	7611	7645	19146	19146					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2428466677666	3	351.241471	1050.70258	0.051373	1.8044E-05	3.1328	0.0011004	3.1842	0.0011184	351.24256174002704	21.728	1.1454	23.344	23.02	24.165	1.6158					55	37	3	0	0	0	0.8462	2	9193	8999;9193		1.0715	0.80244	1	1320600			16288	3361	7611	7645	19147;19148	19148					0.1792600049311659
KVRVLRPAL	9	Unmodified	_KVRVLRPAL_					0	0	0		ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	ENSG00000153561|ENST00000283632|RMND5A	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2440063357353	3	351.241471	1050.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.593	1	26.278	25.778	26.778	1.6845								0	0	0	0.42693	1	10274	10274		0.23584	0	1				16289	3361	7611	7645	19149	19149					0.1792600049311659
KVSGVILSV	9	Unmodified	_KVSGVILSV_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7;ENST00000564968.1_1_16:1507514-1509320:-|nuORF;ENST00000563822.1_1_16:1505719-1509320:-|nuORF	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2891723513603	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.824	1	40.66	40.16	41.16	1.8366								0	0	0	0.2924	1	16281	16281		19.362	0.10495	1				16290	1424	7612	7646	19150	19150					0.11015832454006613
KVSPEGYFV	9	Unmodified	_KVSPEGYFV_					0	0	0			REV__tr|A0A7D6W020|A0A7D6W020_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21830PE=3SV=1	REV__tr|A0A7D6W020|A0A7D6W020_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21830PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2693359255791	2	513.26875	1024.52295	1.9861	0.0010194	0.2323	0.00011923	2.2184	0.0011387	513.268622142836	65.913	0.25266	65.913	65.708	65.961	0					13	7	2	0	0	0	0.66839	1	27471	27471		8.5933	0.68312	1	1448800	+		16291	15574	7613	7647	19151	19151					0.011666516946661432
KVSRKNLLNV	10	Unmodified	_KVSRKNLLNV_					0	0	0		ENSG00000118690|ENST00000392644|ARMC2;nc|ENSG00000118690|Q8NEN0-2|ARMC2	ENSG00000118690|ENST00000392644|ARMC2	ENSG00000118690|ENST00000392644|ARMC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.8712646365166	2	585.869497	1169.72444	3.2057	0.0018781	-0.78233	-0.00045834	2.4234	0.0014198	585.8686575064004	107.44	0.17347	107.59	107.5	107.68	0.15795					27	8	4	0	0	0	0.88314	1	46154	46154		3.2813	0	1	75916000			16292	2044	7614	7648	19152	19152					0.1463676045102602
KVVDPLIK	8	Unmodified	_KVVDPLIK_					0	0	0			REV__tr|A0A7D6W035|A0A7D6W035_9CLOTGamma-glutamylphosphatereductaseOS=ClostridiumintestinaleOX=36845GN=proAPE=3SV=1	REV__tr|A0A7D6W035|A0A7D6W035_9CLOTGamma-glutamylphosphatereductaseOS=ClostridiumintestinaleOX=36845GN=proAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5364562869072	3	304.535661	910.585153	-0.50983	-0.00015526	3.1176	0.00094942	2.6078	0.00079416	304.53647561545006	14.043	0.23952	14.871	14.766	15.005	0.82789					22	8	3	0	0	0	0.89051	1	5828	5828		1.4819	0	1	2290100	+		16293	15575	7615	7649	19153	19153					0.1262842283366581
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5355712771416	3	304.535661	910.585153	-0.28415	-8.6533E-05	2.0844	0.00063479	1.8003	0.00054826	304.53625129493986	21.08	0.86547	22.205	21.984	22.849	1.1254					56	28	4	0	0	0	0.88163	1	8849	8849		5.7319	2.4505	1	16030000			16294	4116	7616	7650	19154	19154					0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5361511111259	3	304.535661	910.585153	-0.42216	-0.00012856	1.9684	0.00059944	1.5462	0.00047088	304.53621423411187	16.191	0.52188	17.23	17.062	17.584	1.0392					63	18	4	0	0	0	0.88163	1	6765	6765		5.7319	3.2334	1	20601000			16295	4116	7616	7650	19155	19155					0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5364562869072	3	304.535661	910.585153	-0.34553	-0.00010523	1.9601	0.00059691	1.6145	0.00049168	304.53621774720295	18.041	0.97282	19.489	19.175	20.147	1.448					91	32	4	0	0	0	0.8873	1	7631	7631		2.9952	1.5133	1	16690000			16296	4116	7616	7650	19156	19156					0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.8651306033134	3	304.535661	910.585153	-0.017342	-5.2813E-06	2.3314	0.00070999	2.314	0.00070471	304.5363997906528	26.273	0.78618	28.02	27.583	28.369	1.747					52	25	3	0	0	0	2.3239	1	10879	10879		2.9952	1.5133	1	6940600			16297	4116	7616	7650	19157	19157					0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	304.535661	910.585153	-0.25423	-7.7421E-05	1.9889	0.00060569	1.7347	0.00052827	304.5362606726336	17.246	0.74681	17.397	17.184	17.931	0.15093	0.053732	-0.00021127	NaN	5.7319	74	26	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14602000			16298	4116	7616	7650							0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	304.535661	910.585153	-0.13458	-4.0986E-05	3.0587	0.00093148	2.9241	0.00089049	304.53655580535246	19.535	1.0653	19.729	19.294	20.359	0.19342	0.088571	0.00018563	NaN	2.9952	95	34	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10115000			16299	4116	7616	7650							0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	-0.90867	-0.00027672	2.6453	0.00080558	1.7366	0.00052885	304.53643454556345	16.504	0.52207	17.402	17.164	17.686	0.89794	0.059154	0.00038838	NaN	5.7319	76	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17978000			16300	4116	7616	7650							0.12628422833643071
KVVILDPK	8	Unmodified	_KVVILDPK_					0	0	0		ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	ENSG00000169871|ENST00000306085|TRIM56	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	-0.61122	-0.00018614	3.2615	0.00099323	2.6502	0.00080709	304.5365704416601	18.723	0.93057	19.702	19.281	20.212	0.97922	0.062322	0.00037088	NaN	2.9952	85	31	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11667000			16301	4116	7616	7650							0.12628422833643071
KVVSVLYNV	9	Unmodified	_KVVSVLYNV_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8083679080009	2	510.808042	1019.60153	1.6883	0.0008624	1.2662	0.00064677	2.9545	0.0015092	510.8085470968368	38.942	0.22604	40.779	40.654	40.88	1.8366					10	6	2	0	0	0	0.46566	1	16336	16336		17.113	9.8237	1	498990			16302	158	7617	7651	19158	19158					0.09251503999757915
KVVTKRKAMVV	11	Unmodified	_KVVTKRKAMVV_					0	0	0			REV__tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	REV__tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	420.2153808474541	3	420.272442	1257.7955	4.0576	0.0017053	0.60823	0.00025562	4.6659	0.0019609	420.27299531238293	91.646	0.39656	92.582	92.403	92.8	0.93624					28	12	3	0	0	0	0.14606	1	38605	38605		0.094841	0	1	2910300	+		16303	15466	7618	7652	19159	19159					0.17691137164160864
KVVYNKLIKC	10	Unmodified	_KVVYNKLIKC_					0	0	0		tr|A0A553SSE6|A0A553SSE6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02985PE=4SV=1	tr|A0A553SSE6|A0A553SSE6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02985PE=4SV=1	tr|A0A553SSE6|A0A553SSE6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02985PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3669311404228	2	604.365201	1206.71585	2.556	0.0015448	1.1142	0.00067338	3.6702	0.0022181	604.3655960912371	92.379	0.52594	92.548	92.249	92.775	0.16835					60	16	5	0	0	0	0.89803	1	38614	38614		0.40072	0.050084	1	15137000			16304	16608	7619	7653	19160	19160					0.12076070490184065
KVWEFKLI	8	Unmodified	_KVWEFKLI_					0	0	0			REV__nc|ENSG00000138376|Q99728-3|BARD1	REV__nc|ENSG00000138376|Q99728-3|BARD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	532.2775146365166	2	531.820953	1061.62735	2.5711	0.0013673	-0.046276	-2.4611E-05	2.5248	0.0013427	531.8216819817784	72.349	0.33575	73.679	73.486	73.822	1.3297					15	10	2	0	0	0	2.3239	1	30362	30362		4.3292	0	1	452960	+		16305	10059	7620	7654	19161	19161					0.09900398242052688
KVWGNVVTV	9	Unmodified	_KVWGNVVTV_					0	0	0		nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2957641482353	2	501.292559	1000.57057	1.4507	0.00072724	-1.442	-0.00072288	0.0086925	4.3575E-06	501.29173273248745	38.217	0.28327	39.51	39.313	39.597	1.2927					12	8	2	0	0	0	0.15635	2	16010	16010;16060		37.974	7.3375	1	1693500			16306	2292	7621	7655	19162;19163	19162					0.07030350685533904
KVWGNVVTV	9	Unmodified	_KVWGNVVTV_					0	0	0		nc|ENSG00000125944|O43390-4|HNRNPR;nc|ENSG00000125944|O43390-3|HNRNPR;ENSG00000125944|ENST00000302271|HNRNPR;nc|ENSG00000125944|O43390-2|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	nc|ENSG00000125944|O43390-4|HNRNPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2928954958916	2	501.292559	1000.57057	0.48868	0.00024497	0.7707	0.00038635	1.2594	0.00063132	501.29302262982515	37.586	0.26537	39.406	39.283	39.548	1.8202					14	8	2	0	0	0	0.12174	1	15767	15767		42.095	7.9921	1	1123900			16307	2292	7621	7655	19164	19164					0.07030350685533904
KWAHCCLI	8	Unmodified	_KWAHCCLI_					0	0	0			REV__nc|ENSG00000183914|Q9P225-3|DNAH2	REV__nc|ENSG00000183914|Q9P225-3|DNAH2	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1636230349541	3	325.163064	972.467363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.12	1	101.12	100.62	101.62	0								0	0	0	1.0178	1	42333	42333		0.45834	0	1		+		16308	14505	7622	7656	19165	19165					-0.019971762983118424
KWEWPQEYEAA	11	Unmodified	_KWEWPQEYEAA_					0	0	0			REV__ENSG00000169291|ENST00000304760|SHE	REV__ENSG00000169291|ENST00000304760|SHE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.5546447634697	3	479.55422	1435.64083	0.717	0.00034384	-0.77887	-0.00037351	-0.061874	-2.9672E-05	479.5539216255215	9.8606	1.0811	9.8606	9.3832	10.464	0					95	39	4	0	0	0	0.82764	2	4039	4039;4090		14.171	2.5394	1	4619300	+		16309	10942	7623	7657	19166;19167	19166					-0.05956440507293337
KWFESGPLLF	10	Unmodified	_KWFESGPLLF_					0	0	0		ENST00000606994.1_1_5:32174612-32175047:+|nuORF	ENST00000606994.1_1_5:32174612-32175047:+|nuORF	ENST00000606994.1_1_5:32174612-32175047:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3298828005791	2	612.326599	1222.63865	2.6871	0.0016454	-1.6685	-0.0010216	1.0186	0.00062372	612.3244514295195	75.889	0.45982	77.656	77.449	77.909	1.7672					32	14	3	0	0	0	0.28421	1	31818	31818		40.239	7.9337	1	2818300			16310	7564	7624	7658	19168	19168					0.03623175545521917
KWFFQKLRF	9	Unmodified	_KWFFQKLRF_					0	0	0		ENSG00000131469|ENST00000253788|RPL27	ENSG00000131469|ENST00000253788|RPL27	ENSG00000131469|ENST00000253788|RPL27	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.9175292849541	3	433.916876	1298.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.679	1	53.076	52.576	53.576	1.3966								0	0	0	0.23225	1	21640	21640		23.79	19.944	1				16311	2494	7625	7659	19169	19169					0.09138269664572363
KWFLDHCS	8	Unmodified	_KWFLDHCS_					0	0	0			REV__ENST00000382592.4_1_13:21620124-21620190:-|nuORF	REV__ENST00000382592.4_1_13:21620124-21620190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2407714724541	2	518.23947	1034.46439	2.8475	0.0014757	0.17386	9.0101E-05	3.0214	0.0015658	518.2397681704961	75.054	2.7506	76.836	76.195	78.945	1.7817					227	87	6	0	0	0	0.88055	1	31566	31566		8.5933	0.98433	1	7905300	+		16312	12786	7626	7660	19170	19170					-0.05146728151476054
KWFTETSIILF	11	Unmodified	_KWFTETSIILF_					0	0	0		VTCN1-GNAI3|1|fusion;ENSG00000065135|ENST00000369851|GNAI3	VTCN1-GNAI3|1|fusion	VTCN1-GNAI3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.3804199099541	2	692.879196	1383.74384	1.2675	0.00087821	-0.42135	-0.00029194	0.84613	0.00058627	692.8787765608517	84.212	0.50924	85.386	85.193	85.702	1.1744					28	16	2	0	0	0	0.12432	2	35303	35303;35347		51.415	28.679	1	4699700			16313	780	7627	7661	19171;19172	19171					0.06731671951297358
KWFTETSIILF	11	Unmodified	_KWFTETSIILF_					0	0	0		VTCN1-GNAI3|1|fusion;ENSG00000065135|ENST00000369851|GNAI3	VTCN1-GNAI3|1|fusion	VTCN1-GNAI3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	692.8781005740166	2	692.879196	1383.74384	1.0751	0.00074489	-0.57614	-0.00039919	0.49893	0.0003457	692.8783565794641	83.671	0.45511	85.309	85.167	85.623	1.6379					31	14	3	0	0	0	0.031929	2	35124	35077;35124		78.06	48.979	1	3075200			16314	780	7627	7661	19173;19174	19174					0.06731671951297358
KWGKITAL	8	Unmodified	_KWGKITAL_					0	0	0		ENSG00000138411|ENST00000644978|HECW2	ENSG00000138411|ENST00000644978|HECW2	ENSG00000138411|ENST00000644978|HECW2	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1911193728447	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.749	1	32.749	32.249	33.249	0								0	0	0	1.0178	1	13721	13721		0	0	1				16315	2828	7628	7662	19175	19175					0.09303269519386959
KWGKKKKK	8	Unmodified	_KWGKKKKK_					0	0	0		ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.8480712771416	2	515.847836	1029.68112	2.9077	0.0014999	1.8763	0.00096786	4.784	0.0024678	515.8483349412568	109.44	0.57954	109.49	109.29	109.87	0.048843					38	22	2	0	0	0	0.89178	1	47176	47176		0.69038	0.69038	1	8117800			16316	5916	7629	7663	19176	19176					0.16746615464398928
KWGKKKKK	8	Unmodified	_KWGKKKKK_					0	0	0		ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.847836	1029.68112	3.3871	0.0017472	1.2428	0.00064109	4.6299	0.0023883	515.8480121439983	109.37	0.44887	109.53	109.42	109.87	0.15898	0.0076262	-0.00076112	NaN	0.69038	32	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11150000			16317	5916	7629	7663							0.16746615464398928
KWGKKKKK	8	Unmodified	_KWGKKKKK_					0	0	0		ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	ENST00000336314.8_2_5:154193974-154194505:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	515.847836	1029.68112	3.4678	0.0017888	2.9434	0.0015184	6.4112	0.0033072	515.8487317660266	109.39	0.52254	109.54	109.36	109.89	0.1548	0.02098	0.00099344	NaN	0.69038	48	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8920000			16318	5916	7629	7663							0.16746615464398928
KWIGDQFV	8	Unmodified	_KWIGDQFV_					0	0	0			REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7654907107353	2	496.763635	991.512717	4.1446	0.0020589	0.56098	0.00027867	4.7056	0.0023376	496.76346536280147	86.36	0.37795	87.907	87.854	88.232	1.547					23	13	2	0	0	0	0.89051	1	36395	36395		2.3027	0	1	2720500	+		16319	15555	7630	7664	19177	19177					0.01662088760087954
KWIGDQFV	8	Unmodified	_KWIGDQFV_					0	0	0			REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	496.763635	991.512717	3.7377	0.0018567	1.8096	0.00089894	5.5473	0.0027557	496.7641819189	86.747	0.45602	87.839	87.634	88.09	1.0918	-0.033815	0.00054129	NaN	2.3027	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2202600	+		16320	15555	7630	7664							0.01662088760087954
KWIGDQFV	8	Unmodified	_KWIGDQFV_					0	0	0			REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	REV__tr|A0A7D6VY10|A0A7D6VY10_9CLOTM23familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	496.763635	991.512717	4.1446	0.0020589	0.56098	0.00027867	4.7056	0.0023376	496.76346536280147	86.36	0.37795	87.907	87.854	88.232	1.547	0.033815	-0.00069925	NaN	2.3027	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2720500	+		16321	15555	7630	7664							0.01662088760087954
KWIGLSLQ	8	Unmodified	_KWIGLSLQ_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-3|VPS13A;REV__VPS13A-SLC44A1|2|fusion	REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7853271365166	2	472.781828	943.549102	3.3327	0.0015757	3.531	0.0016694	6.8637	0.003245	472.78395139398987	86.89	0.3492	87.133	86.914	87.264	0.24387					18	14	2	0	0	0	0.89051	1	36367	36367		2.3027	0.4585	1	6079100	+		16322	11696;15933	7631	7665	19178	19178					0.07506965656807552
KWIHHPKHLRK	11	Unmodified	_KWIHHPKHLRK_					0	0	0			REV__SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant	REV__SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9656860232353	3	493.965112	1478.87351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5102	1	4.5102	4.0102	5.0102	0								0	0	0	0.63775	1	1853	1853		0.08335	0	1		+		16323	9286	7632	7666	19179	19179					0.1532233086445558
KWIHLLLMI	9	Unmodified	_KWIHLLLMI_					0	0	0			REV__ENST00000508878.5_1_5:127359968-127417754:-|nuORF	REV__ENST00000508878.5_1_5:127359968-127417754:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8623535037041	2	583.859555	1165.70456	3.8308	0.0022367	-1.633	-0.00095345	2.1978	0.0012832	583.8585462149618	81.816	0.50229	83.487	83.264	83.766	1.67					26	15	2	0	0	0	0.82604	1	34313	34313		2.3027	0.24298	1	1188600	+		16324	13557	7633	7667	19180	19180					0.12833293186736228
KWKKFVLL	8	Unmodified	_KWKKFVLL_					0	0	0			REV__tr|A0A553SGG1|A0A553SGG1_NIACIFlagellarbasalbodyrodproteinOS=NialliacirculansOX=1397GN=CEQ21_10765PE=4SV=1	REV__tr|A0A553SGG1|A0A553SGG1_NIACIFlagellarbasalbodyrodproteinOS=NialliacirculansOX=1397GN=CEQ21_10765PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.4083740115166	2	531.347138	1060.67972	3.4711	0.0018444	3.0346	0.0016124	6.5057	0.0034568	531.3498960692276	107.05	0.2496	107.22	107.13	107.38	0.16174					26	11	3	0	0	0	2.3239	1	45974	45974		0.69038	0	1	8845400	+		16325	14745	7634	7668	19181	19181					0.15180981375669944
KWKKFVRRKKK	11	Unmodified	_KWKKFVRRKKK_					0	0	0		ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	766.5103637576103	2	766.506629	1530.99871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.42	1	108.47	107.97	108.97	0.050644								0	0	0	0.63775	1	46607	46607		0	0	1				16326	6490	7635	7669	19182	19182					0.2544462300079431
KWKKFVRRKKK	11	Unmodified	_KWKKFVRRKKK_					0	0	0		ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	ENST00000429378.5_3_16:242971-256079:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	766.5112792849541	2	766.506629	1530.99871	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.52	1	108.57	108.07	109.07	0.050644								0	0	0	0.63775	1	46662	46662		0	0	1				16327	6490	7635	7669	19183	19183					0.2544462300079431
KWKKRKKKLL	10	Unmodified	_KWKKRKKKLL_					0	0	0			REV__ENST00000471830.1_1_20:3888626-3888701:+|nuORF	REV__ENST00000471830.1_1_20:3888626-3888701:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	678.4755126833916	2	678.471724	1354.92889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.958	1	97.264	96.764	97.764	0.3062								0	0	0	0.66264	1	40784	40784		0	0	1		+		16328	13291	7636	7670	19184	19184					0.2656274433222734
KWKLKQKKKL	10	Unmodified	_KWKLKQKKKL_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	332.2334472537041	4	332.728867	1326.88636	-1.7678	-0.00058819	-2.9952	-0.00099658	-4.763	-0.0015848	332.97866089650483	73.642	0.70287	73.642	73.312	74.014	0					30	22	2	0	0	0	0.12561	1	30763	30763		0.13989	0.13989	1	449730			16329	3407	7637	7671	19185	19185					0.23599349203959719
KWKLKQKKKL	10	Unmodified	_KWKLKQKKKL_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	332.728867	1326.88636	1.5395	0.00051224	-5.4789	-0.001823	-3.9394	-0.0013107	332.72713429176133	72.935	0.19379	73.26	73.114	73.308	0.32494	-0.19116	-0.0022817	NaN	0.13989	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	468000			16330	3407	7637	7671							0.23599349203959719
KWKLKQKKKLE	11	Unmodified	_KWKLKQKKKLE_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	728.9718505740166	2	728.971754	1455.92895	2.5492	0.0018583	-1.6511	-0.0012036	0.89809	0.00065468	728.970476663635	107.17	0.16149	107.33	107.23	107.39	0.15781					19	7	4	0	0	0	1.0393	1	46040	46040		0.35063	0	1	18666000			16331	3407	7638	7672	19186	19186					0.21922699541551083
KWKLKQKKKLE	11	Unmodified	_KWKLKQKKKLE_					0	0	0		nc|ENSG00000155085|Q5TCS8-6|AK9;ENSG00000155085|ENST00000424296|AK9;nc|ENSG00000155085|Q5TCS8-5|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	nc|ENSG00000155085|Q5TCS8-6|AK9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	728.971754	1455.92895	2.643	0.0019267	-4.0514	-0.0029533	-1.4084	-0.0010267	728.9689554560429	107.17	0.14321	107.33	107.23	107.38	0.16174	-0.00080206	-0.0027238	NaN	0.35063	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13407000			16332	3407	7638	7672							0.21922699541551083
KWKNGNKLKWI	11	Unmodified	_KWKNGNKLKWI_					0	0	0			REV__ENST00000476474.5_1_19:12098553-12146369:+|nuORF	REV__ENST00000476474.5_1_19:12098553-12146369:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2848083376884	3	472.282106	1413.82449	3.1183	0.0014727	-0.53634	-0.0002533	2.582	0.0012194	472.28123472315633	87.177	1.8927	87.177	86.84	88.732	0					108	67	2	0	0	0	1.039	1	36529	36529		0.45452	0	1	5550500	+		16333	12903	7639	7673	19187	19187					0.13412997784826075
KWKRHKLVIR	10	Unmodified	_KWKRHKLVIR_					0	0	0			REV__ENST00000328709.7_1_2:99216911-99216989:-|nuORF	REV__ENST00000328709.7_1_2:99216911-99216989:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2993652224541	3	455.298091	1362.87244	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.87	1	111.02	110.52	111.52	0.15038								0	0	0	0.66255	1	48064	48064		0.13989	0.13989	1		+		16334	12440	7640	7674	19188	19188					0.20552116495514383
KWKWLILC	8	Unmodified	_KWKWLILC_					0	0	0			REV__nc|ENSG00000114013|P42081-2|CD86	REV__nc|ENSG00000114013|P42081-2|CD86	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3200561404228	2	545.317523	1088.62049	2.5934	0.0014142	0.64219	0.0003502	3.2356	0.0017644	545.317790708254	87.48	0.42805	87.715	87.518	87.946	0.23471					32	13	3	0	0	0	0.89178	3	36649	36649;36697;36755		0.69038	0	1	4379500	+		16335	9395	7641	7675	19189;19190;19191	19189					0.07972762089821117
KWLFKKETSNN	11	Unmodified	_KWLFKKETSNN_					0	0	0			REV__nc|ENSG00000171495|Q7Z745-2|MROH2B	REV__nc|ENSG00000171495|Q7Z745-2|MROH2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	697.8770019412041	2	697.874976	1393.7354	-0.16884	-0.00011783	3.379	0.0023581	3.2102	0.0022403	697.8770713120058	57.247	0.20111	59.216	59.126	59.327	1.9684					21	14	2	0	0	0	0.82375	1	24019	24019		14.405	0.79051	1	5362800	+		16336	11030	7642	7676	19192	19192					0.054281180346833935
KWLFKLILKDI	11	Unmodified	_KWLFKLILKDI_					0	0	0			REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|8|1|sense	REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|8|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9718200564384	3	472.970758	1415.89044	2.2008	0.0010409	0.98232	0.00046461	3.1831	0.0015055	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0391	2	16315	16315;16367		0.40827	0.32491	1	10069000	+		16337	14254	7643	7677	19193;19194	19193					0.19913393907017962
KWLIVPQR	8	Unmodified	_KWLIVPQR_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2210265994072	3	347.218555	1038.63383	1.0255	0.00035606	2.8333	0.00098377	3.8587	0.0013398	347.2201937690736	45.246	0.4541	46.612	46.433	46.887	1.3653					32	13	3	0	0	0	0.88663	1	18945	18945		6.2058	0	1	2462100	+		16338	9667	7644	7678	19195	19195					0.11606336193403877
KWLIVPQR	8	Unmodified	_KWLIVPQR_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2198974490166	3	347.218555	1038.63383	1.4928	0.00051833	2.2424	0.00077859	3.7352	0.0012969	347.21982630972025	44.649	0.48042	46.608	46.448	46.928	1.9596					37	14	3	0	0	0	0.88663	1	18718	18718		3.2813	0	1	2116600	+		16339	9667	7644	7678	19196	19196					0.11606336193403877
KWLIVPQR	8	Unmodified	_KWLIVPQR_					0	0	0			REV__ENSG00000125484|ENST00000372146|GTF3C4	REV__ENSG00000125484|ENST00000372146|GTF3C4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	347.218555	1038.63383	1.354	0.00047014	5.782	0.0020076	7.136	0.0024777	347.2213028261078	46.394	0.31601	46.723	46.561	46.877	0.32899	0.075622	0.0027767	NaN	6.2058	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1385300	+		16340	9667	7644	7678							0.11606336193403877
KWLLLWMKDLI	11	Unmodified	_KWLLLWMKDLI_					0	0	0		ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	487.7837707400322	3	486.956231	1457.84686	2.6509	0.0012909	4.4285	0.0021565	7.0795	0.0034474	486.9586986342087	86.67	0.61754	86.67	86.103	86.72	0					30	20	2	0	0	0	0.14606	1	35970	35970		1.2148	0.70888	1	1446200			16341	5575	7645	7679	19197	19197					0.1362546113823555
KWLLTKLH	8	Unmodified	_KWLLTKLH_					0	0	0			REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	346.0712158083916	3	346.886805	1037.63859	-2.1318	-0.00073949	2.8654	0.00099396	0.73359	0.00025447	346.88731708508334	21.911	0.12325	21.911	21.842	21.966	0					5	3	2	0	0	0	2.3239	1	9096	9096		0.45834	0	1	100600	+		16342	10793	7646	7680	19198	19198					0.12127220336174105
KWLLTKLH	8	Unmodified	_KWLLTKLH_					0	0	0			REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	346.886805	1037.63859	0.27135	9.4126E-05	-1.3795	-0.00047854	-1.1082	-0.00038442	346.8859386641438	21.724	0.1203	21.947	21.872	21.992	0.223	0.038662	-0.0026708	NaN	0.45834	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	348400	+		16343	10793	7646	7680							0.12127220336174105
KWLLTKLH	8	Unmodified	_KWLLTKLH_					0	0	0			REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	REV__nc|ENSG00000165716|Q5VUD6-2|DIPK1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	346.886805	1037.63859	-0.037384	-1.2968E-05	3.2179	0.0011162	3.1805	0.0011033	346.88785972354196	20.291	0.12045	21.866	21.791	21.911	1.5748	-0.041856	0.0021135	NaN	0.45834	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	324880	+		16344	10793	7646	7680							0.12127220336174105
KWLLYPTEI	9	Unmodified	_KWLLYPTEI_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000505306.5_1_17:48154319-48165696:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8308593630791	2	581.828975	1161.6434	1.9498	0.0011345	2.2226	0.0012931	4.1724	0.0024276	581.8298455591244	66.192	0.30151	67.581	67.418	67.719	1.3888					21	9	3	0	0	0	0.044893	2	27747	27747;27804		71.922	10.565	1	2367100			16345	496	7647	7681	19199;19200	19199					0.0690405968828145
KWLLYPTEI	9	Unmodified	_KWLLYPTEI_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000505306.5_1_17:48154319-48165696:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8315307497978	2	581.828975	1161.6434	1.7063	0.00099278	1.5105	0.00087885	3.2168	0.0018716	581.8301264426113	65.698	0.26908	67.607	67.437	67.706	1.9085					20	8	3	0	0	0	0.079895	1	27566	27566		56.177	16.22	1	1745100			16346	496	7647	7681	19201	19201					0.0690405968828145
KWNLHKRIALK	11	Unmodified	_KWNLHKRIALK_					0	0	0		SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant;ENSG00000081800|ENST00000194130|SLC13A1	SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	352.5467407107353	4	352.474032	1405.86702	0.14653	5.1647E-05	2.9958	0.0010559	3.1423	0.0011076	352.47533255871787	24.384	0.46408	25.625	25.268	25.732	1.241					17	14	2	0	0	0	0.14606	1	10096	10096		1.2148	0.70888	1	696200			16347	1024	7648	7682	19202	19202					0.18032392913073636
KWNPTAGVAF	10	Unmodified	_KWNPTAGVAF_					0	0	0		ENST00000564651.5_1_16:57496627-57504171:+|nuORF;ENST00000562953.5_1_16:57496627-57504105:+|nuORF;ENSG00000102978|ENST00000219252|POLR2C	ENST00000564651.5_1_16:57496627-57504171:+|nuORF	ENST00000564651.5_1_16:57496627-57504171:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7895385622978	2	545.787641	1089.56073	2.5084	0.001369	0.48435	0.00026435	2.9927	0.0016334	545.7878872273063	44.737	0.53398	46.103	45.867	46.401	1.3653					55	16	5	0	0	0	0.05359	4	18740	18691;18740;18778;18817		92.653	45.542	1	57014000			16348	1410	7649	7683	19203;19204;19205;19206	19204					0.019531626801381208
KWNPTAGVAF	10	Unmodified	_KWNPTAGVAF_					0	0	0		ENST00000564651.5_1_16:57496627-57504171:+|nuORF;ENST00000562953.5_1_16:57496627-57504105:+|nuORF;ENSG00000102978|ENST00000219252|POLR2C	ENST00000564651.5_1_16:57496627-57504171:+|nuORF	ENST00000564651.5_1_16:57496627-57504171:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7890502810478	2	545.787641	1089.56073	2.2617	0.0012344	0.72138	0.00039372	2.9831	0.0016282	545.7880486528005	44.154	0.56828	46.098	45.831	46.399	1.9438					63	17	5	0	0	0	0.05359	4	18565	18438;18486;18525;18565		147.06	92.286	1	53611000			16349	1410	7649	7683	19207;19208;19209;19210	19210					0.019531626801381208
KWPETPLLL	9	Unmodified	_KWPETPLLL_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8251830935478	2	548.823692	1095.63283	1.1656	0.00063972	1.8273	0.0010029	2.9929	0.0016426	548.8243732170494	67.256	0.52142	69.145	68.828	69.35	1.8889					35	16	3	0	0	0	0.033504	1	28180	28180		81.89	3.9059	1	2495300			16350	1396	7650	7684	19211	19211					0.08884077033872018
KWPETPLLL	9	Unmodified	_KWPETPLLL_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000102595|Q9NYU1-2|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	548.823692	1095.63283	1.7005	0.00093328	2.3624	0.0012965	4.0629	0.0022298	548.8243696691359	67.82	0.54517	69.197	68.882	69.427	1.3778	0.026377	0.00044212	NaN	81.89	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2631600			16351	1396	7650	7684							0.08884077033872018
KWPLPAQA	8	Unmodified	_KWPLPAQA_					0	0	0			REV__ENST00000370544.9_1_1:87794674-87797922:+|nuORF	REV__ENST00000370544.9_1_1:87794674-87797922:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1756164431572	3	304.176356	909.507237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.438	1	77.732	77.232	78.232	1.2938								0	0	0	1.0178	1	32090	32090		0.45834	0	1		+		16352	12662	7651	7685	19212	19212					0.04886409968275984
KWPVKVFIF	9	Unmodified	_KWPVKVFIF_					0	0	0			REV__ENST00000336216.8_1_15:77713046-77713202:+|nuORF	REV__ENST00000336216.8_1_15:77713046-77713202:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3561279177666	2	582.35242	1162.69029	5.0158	0.002921	1.6739	0.0009748	6.6897	0.0038958	582.353257548412	89.641	0.62501	90.661	90.397	91.022	1.0199					59	19	4	0	0	0	0.8523	1	37806	37806		0.52476	0	1	15992000	+		16353	12469	7652	7686	19213	19213					0.11544964030076699
KWRRKRRWNN	10	Unmodified	_KWRRKRRWNN_					0	0	0		ENST00000553345.5_1_20:31020694-31021097:+|nuORF	ENST00000553345.5_1_20:31020694-31021097:+|nuORF	ENST00000553345.5_1_20:31020694-31021097:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2907287478447	3	500.623748	1498.84942	2.7004	0.0013519	1.4575	0.00072967	4.1579	0.0020815	500.6246958960658	79.996	0.1844	81.247	81.14	81.324	1.2512					10	5	2	0	0	0	0.12561	1	33557	33557		0.13989	0.04505	1	404300			16354	7279	7653	7687	19214	19214					0.11994490430788574
KWRWVLVRRPR	11	Unmodified	_KWRWVLVRRPR_					0	0	0			REV__ENST00000515588.1_1_5:69321469-69322288:+|nuORF	REV__ENST00000515588.1_1_5:69321469-69322288:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.2408019900322	4	388.74284	1550.94225	0.56177	0.00021838	0.76217	0.00029629	1.3239	0.00051467	388.74311833235356	36.192	0.28923	38.01	37.776	38.065	1.8176					26	15	2	0	0	0	0.14606	1	15159	15159		0.50596	0.4226	1	4345400	+		16355	13601	7654	7688	19215	19215					0.1888199516415625
KWSKGKCK	8	Unmodified	_KWSKGKCK_					0	0	0		ENSG00000175105|ENST00000636215|ZNF654	ENSG00000175105|ENST00000636215|ZNF654	ENSG00000175105|ENST00000636215|ZNF654	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1862365603447	3	322.184745	963.532406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.882	1	50.212	49.712	50.712	0.33019								0	0	0	1.0178	1	20900	20900		1.4819	0	1				16356	4354	7655	7689	19216	19216					0.049181414992062855
KWSRHRRLL	9	Unmodified	_KWSRHRRLL_					0	0	0		CYP4F22|p.F349Lfs*21|1|0.04|ENSG00000171954|chr19:15544190-15544190|C/-|frameshift_variant;CYP4F22|p.M270Ffs*111|1|0.04|ENSG00000171954|chr19:15540585-15540586|-/TTTTTAAAAAATAATGGCTTTGTTGAGACACA|frameshift_variant;ENSG00000171954|ENST00000269703|CYP4F22	CYP4F22|p.F349Lfs*21|1|0.04|ENSG00000171954|chr19:15544190-15544190|C/-|frameshift_variant	CYP4F22|p.F349Lfs*21|1|0.04|ENSG00000171954|chr19:15544190-15544190|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9237853884697	3	417.923024	1250.74724	2.9413	0.0012292	-1.4031	-0.00058639	1.5382	0.00064284	417.92220993239306	94.227	0.53398	94.372	94.133	94.667	0.14493					60	16	5	0	0	0	0.84771	1	39403	39403		0.86438	0.16671	1	23177000			16357	388	7656	7690	19217	19217					0.1318982435916496
KWTLERLKRKY	11	Unmodified	_KWTLERLKRKY_					0	0	0		nc|ENSG00000070495|Q6NYC1-2|JMJD6;ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	nc|ENSG00000070495|Q6NYC1-2|JMJD6	nc|ENSG00000070495|Q6NYC1-2|JMJD6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	380.2303344607353	4	380.981956	1519.89872	-0.3299	-0.00012569	-3.2132	-0.0012242	-3.5431	-0.0013499	380.98099562896493	73.234	0.53073	73.234	72.81	73.341	0					23	16	2	0	0	0	0.14606	1	30436	30436		0.40827	0.40827	1	576400			16358	854	7657	7691	19218	19218					0.15956340876346076
KWTLERLKRKY	11	Unmodified	_KWTLERLKRKY_					0	0	0		nc|ENSG00000070495|Q6NYC1-2|JMJD6;ENSG00000070495|ENST00000397625|JMJD6;nc|ENSG00000070495|Q6NYC1-3|JMJD6	nc|ENSG00000070495|Q6NYC1-2|JMJD6	nc|ENSG00000070495|Q6NYC1-2|JMJD6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	380.981956	1519.89872	1.7522	0.00066757	-2.2019	-0.00083888	-0.44966	-0.00017131	380.9807818089014	72.299	0.1227	73.628	73.55	73.672	1.3297	0.19726	0.0012821	NaN	0.40827	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225030			16359	854	7657	7691							0.15956340876346076
KWTRKMKRRWE	11	Unmodified	_KWTRKMKRRWE_					0	0	0			REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	REV__ENST00000486943.1_3_X:49065690-49065852:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	802.9515258669853	2	802.951361	1603.88817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.094	1	93.262	92.762	93.762	0.16835								0	0	0	0.63775	1	38978	38978		0	0	1		+		16360	13395	7658	7692	19219	19219					0.11038034950274778
KWTSVLLLIH	10	Unmodified	_KWTSVLLLIH_					0	0	0		nc|ENSG00000135226|Q9BY64-2|UGT2B28;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1895324587822	4	303.189309	1208.72813	0.045583	1.382E-05	1.1271	0.00034174	1.1727	0.00035556	303.1893748930428	27.904	0.46357	29.679	29.354	29.818	1.7754					46	14	4	0	0	0	0.89803	1	11605	11605		0.62683	0	1	4115100			16361	2652	7659	7693	19220	19220					0.13211430224896503
KWTSVLLLIH	10	Unmodified	_KWTSVLLLIH_					0	0	0		nc|ENSG00000135226|Q9BY64-2|UGT2B28;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	303.189309	1208.72813	-2.7517	-0.00083429	3.7252	0.0011294	0.97344	0.00029514	303.1897980061976	29.646	0.37135	29.646	29.423	29.795	0	-0.086782	0.0028175	NaN	0.62683	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2002500			16362	2652	7659	7693							0.13211430224896503
KWTSVLLLIH	10	Unmodified	_KWTSVLLLIH_					0	0	0		nc|ENSG00000135226|Q9BY64-2|UGT2B28;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	303.189309	1208.72813	0.41381	0.00012546	1.7502	0.00053064	2.164	0.0006561	303.18980038851765	29.65	0.48573	29.93	29.712	30.197	0.27929	0.1974	0.00042236	NaN	0.62683	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4125100			16363	2652	7659	7693							0.13211430224896503
KWTSVLLLIH	10	Unmodified	_KWTSVLLLIH_					0	0	0		nc|ENSG00000135226|Q9BY64-2|UGT2B28;ENSG00000213759|ENST00000446444|UGT2B11;ENSG00000135226|ENST00000335568|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	nc|ENSG00000135226|Q9BY64-2|UGT2B28	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	303.189309	1208.72813	-0.25282	-7.6651E-05	-0.092946	-2.818E-05	-0.34576	-0.00010483	303.18851990111136	28.396	0.45928	29.675	29.454	29.913	1.2789	-0.057589	-0.0018129	NaN	0.62683	47	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3274200			16364	2652	7659	7693							0.13211430224896503
KWVIIRIRLV	10	Unmodified	_KWVIIRIRLV_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|186|2|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|186|2|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|186|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	648.4352294802666	2	648.43735	1294.86015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.72	1	112.87	112.37	113.37	0.14912								0	0	0	0.6624	1	48825	48825		0.40072	0	1				16365	7607	7660	7694	19221	19221					0.2245108003248788
KWVIRQPV	8	Unmodified	_KWVIRQPV_					0	0	0		nc|ENSG00000158816|Q5TIE3-3|VWA5B1;nc|ENSG00000158816|Q5TIE3-4|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	342.2120544314384	3	342.546671	1024.61818	-0.57422	-0.0001967	2.7578	0.00094467	2.1836	0.00074797	342.5473478627651	31.536	0.76387	32.818	32.438	33.202	1.2813					58	24	3	0	0	0	2.3239	1	13351	13351		1.4819	1.4819	1	2695500			16366	3509	7661	7695	19222	19222					0.10686049676360199
KWVIRQPV	8	Unmodified	_KWVIRQPV_					0	0	0		nc|ENSG00000158816|Q5TIE3-3|VWA5B1;nc|ENSG00000158816|Q5TIE3-4|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.5475341677666	3	342.546671	1024.61818	0.20816	7.1306E-05	2.0376	0.00069796	2.2457	0.00076926	342.54722186056335	27.007	0.40225	28.754	28.524	28.926	1.747					23	12	2	0	0	0	0.88663	1	11299	11299		6.2058	3.7073	1	1225900			16367	3509	7661	7695	19223	19223					0.10686049676360199
KWYRLKRCL	9	Unmodified	_KWYRLKRCL_					0	0	0			REV__ENST00000596769.1_1_19:53510963-53514048:+|nuORF	REV__ENST00000596769.1_1_19:53510963-53514048:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3709594607353	2	633.36861	1264.72267	1.9685	0.0012468	0.59726	0.00037828	2.5657	0.0016251	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	0.85019	1	33752	33752		0.52476	0	1	7751600	+		16368	14094	7662	7696	19224	19224					0.10089428161450087
KYAAELHLVH	10	Unmodified	_KYAAELHLVH_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENSG00000164879|ENST00000285381|CA3	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2204772830009	3	394.220624	1179.64004	-0.80341	-0.00031672	1.7918	0.00070638	0.98843	0.00038966	394.2212831557582	21.537	0.46629	21.537	21.376	21.842	0					31	14	3	0	0	0	0.44465	1	8930	8930		20.581	15.284	1	1249600			16369	1455	7663	7697	19225	19225					0.05740809634266952
KYAAELHLVH	10	Unmodified	_KYAAELHLVH_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENSG00000164879|ENST00000285381|CA3	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2204772830009	3	394.220624	1179.64004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.87	1	21.081	20.581	21.581	0.21024								0	0	0	0.64816	1	8668	8668		9.544	5.6676	1				16370	1455	7663	7697	19226	19226					0.05740809634266952
KYAMMFAEL	9	Unmodified	_KYAMMFAEL_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2689086794853	2	552.266838	1102.51912	2.7011	0.0014917	0.30092	0.00016619	3.002	0.0016579	552.2670030223483	60.303	0.45743	61.722	61.507	61.964	1.4196					40	14	4	0	0	0	0.53525	1	25267	25267		13.906	0	1	3786800			16371	1076	7664	7698	19227	19227					-0.028034773950594172
KYAMMFAEL	9	Unmodified	_KYAMMFAEL_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2685424685478	2	552.266838	1102.51912	2.8593	0.0015791	0.66338	0.00036636	3.5227	0.0019455	552.2672954835076	59.81	0.40005	61.779	61.55	61.95	1.969					35	12	4	0	0	0	0.44512	2	25053	25053;25107		18.146	4.2403	1	3769800			16372	1076	7664	7698	19228;19229	19228					-0.028034773950594172
KYCNDLTIF	9	Unmodified	_KYCNDLTIF_					0	0	0			REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.7723266482353	2	558.773342	1115.53213	2.247	0.0012555	-3.6012	-0.0020123	-1.3542	-0.00075671	558.7715166731343	45.405	0.32391	46.771	46.596	46.92	1.3653					19	9	3	0	0	0	0.68551	1	19007	19007		7.9102	2.1783	1	1310300	+		16373	15907	7665	7699	19230	19230					-0.021013230113339887
KYCNDLTIF	9	Unmodified	_KYCNDLTIF_					0	0	0			REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	558.773342	1115.53213	2.247	0.0012555	-3.6012	-0.0020123	-1.3542	-0.00075671	558.7715166731343	45.405	0.32391	46.771	46.596	46.92	1.3653	-0.070684	0.00022397	NaN	7.9102	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1310300	+		16374	15907	7665	7699							-0.021013230113339887
KYCNDLTIF	9	Unmodified	_KYCNDLTIF_					0	0	0			REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	REV__tr|A0A7D7ADG0|A0A7D7ADG0_9CLOTPrecorrin-6YC5,15-methyltransferase(Decarboxylating)subunitCbiTOS=ClostridiumintestinaleOX=36845GN=cbiTPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	558.773342	1115.53213	1.8263	0.0010205	-3.998	-0.002234	-2.1717	-0.0012135	558.7713095670367	44.952	0.31763	46.912	46.703	47.021	1.9596	0.070684	-0.00021942	NaN	7.9102	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1174800	+		16375	15907	7665	7699							-0.021013230113339887
KYCQAAHKLM	10	Unmodified	_KYCQAAHKLM_					0	0	0		nc|ENSG00000162065|Q9ULP9-2|TBC1D24;ENSG00000162065|ENST00000646147|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8033325076103	2	596.801911	1191.58927	1.4071	0.00083978	1.505	0.0008982	2.9122	0.001738	596.8029932735274	71.271	0.52499	73.094	72.728	73.253	1.824					27	16	2	0	0	0	0.6819	1	29881	29881		19.257	2.3147	1	1557300			16376	3604	7666	7700	19231	19231					0.001138209933969847
KYCQAAHKLM	10	Unmodified	_KYCQAAHKLM_					0	0	0		nc|ENSG00000162065|Q9ULP9-2|TBC1D24;ENSG00000162065|ENST00000646147|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	596.801911	1191.58927	2.0385	0.0012166	2.705	0.0016144	4.7435	0.0028309	596.8033086944589	71.807	1.2956	73.149	72.689	73.985	1.3415	0.027187	0.00079528	NaN	19.257	67	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1414500			16377	3604	7666	7700							0.001138209933969847
KYDDEETH	8	Unmodified	_KYDDEETH_					0	0	0		tr|A0A7D7A1D5|A0A7D7A1D5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20410PE=4SV=1	tr|A0A7D7A1D5|A0A7D7A1D5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20410PE=4SV=1	tr|A0A7D7A1D5|A0A7D7A1D5_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1452209353447	3	346.145449	1035.41452	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.965	1	21.176	20.676	21.676	0.21024								0	0	0	1.0178	1	8708	8708		0.45834	0	1				16378	17236	7667	7701	19232	19232					-0.10177184346412105
KYDEIFYNL	9	Unmodified	_KYDEIFYNL_					0	0	0		ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2;ENSG00000024422|ENST00000263277|EHD2	ENST00000540884.1_1_19:48232905-48244686:+|nuORF	ENST00000540884.1_1_19:48232905-48244686:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.7986938357353	2	602.797872	1203.58119	1.0704	0.00064523	0.38846	0.00023416	1.4589	0.00087939	602.7981260317488	57.222	0.56026	58.637	58.369	58.929	1.4145					61	19	4	0	0	0	0.00020031	4	24009	23915;23958;24009;24050		142.08	56.438	1	40167000			16379	622	7668	7702	19233;19234;19235;19236	19235					-0.012457114507014921
KYDEIFYNL	9	Unmodified	_KYDEIFYNL_					0	0	0		ENST00000540884.1_1_19:48232905-48244686:+|nuORF;nc|ENSG00000024422|Q9NZN4-2|EHD2;ENSG00000024422|ENST00000263277|EHD2	ENST00000540884.1_1_19:48232905-48244686:+|nuORF	ENST00000540884.1_1_19:48232905-48244686:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.7989379763603	2	602.797872	1203.58119	0.91313	0.00055043	1.0804	0.00065128	1.9936	0.0012017	602.7985579205904	56.624	0.53876	58.592	58.425	58.964	1.9684					58	17	5	0	0	0	0.0080158	4	23805	23705;23752;23805;23864		110.67	50.601	1	40884000			16380	622	7668	7702	19237;19238;19239;19240	19239					-0.012457114507014921
KYDTDFYIL	9	Unmodified	_KYDTDFYIL_					0	0	0		ENST00000489964.5_1_2:136664888-136672125:-|nuORF;nc|ENSG00000115866|P14868-2|DARS1;ENSG00000115866|ENST00000264161|DARS1;DARS-R3HDM1|1|fusion	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2936279177666	2	589.292422	1176.57029	3.0318	0.0017866	0.003147	1.8545E-06	3.035	0.0017885	589.2925927525392	59.934	0.4053	61.903	61.64	62.046	1.969					20	12	2	0	0	0	0.1109	1	25120	25120		45.7	13.394	1	1551000			16381	390	7669	7703	19241	19241					-0.01093113825004366
KYDTDFYIL	9	Unmodified	_KYDTDFYIL_					0	0	0		ENST00000489964.5_1_2:136664888-136672125:-|nuORF;nc|ENSG00000115866|P14868-2|DARS1;ENSG00000115866|ENST00000264161|DARS1;DARS-R3HDM1|1|fusion	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	ENST00000489964.5_1_2:136664888-136672125:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	589.292422	1176.57029	3.0363	0.0017893	-0.49654	-0.00029261	2.5398	0.0014967	589.2920639480931	60.456	0.43308	61.876	61.656	62.089	1.4196	-0.013297	-0.00031519	NaN	45.7	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1482100			16382	390	7669	7703							-0.01093113825004366
KYDVYYEQLP	10	Unmodified	_KYDVYYEQLP_					0	0	0			REV__nc|ENSG00000176204|Q86VH4-2|LRRTM4	REV__nc|ENSG00000176204|Q86VH4-2|LRRTM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	659.3206664919853	2	659.321711	1316.62887	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.345	1	70.71	70.21	71.21	1.3657								0	0	0	0.66031	1	29104	29104		3.9444	0	1		+		16383	11175	7670	7704	19242	19242					-0.016780572505467717
KYEAIQLTF	9	Unmodified	_KYEAIQLTF_					0	0	0		ENST00000424783.1_1_2:99718519-99719212:+|nuORF;ENSG00000108055|ENST00000361804|SMC3	ENST00000424783.1_1_2:99718519-99719212:+|nuORF	ENST00000424783.1_1_2:99718519-99719212:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8027831912041	2	556.802957	1111.59136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.237	1	54.637	54.137	55.137	1.4005								0	0	0	0.070941	1	22280	22280		40.239	4.1122	1				16384	1619	7671	7705	19243	19243					0.04002896274505474
KYEAIQLTF	9	Unmodified	_KYEAIQLTF_					0	0	0		ENST00000424783.1_1_2:99718519-99719212:+|nuORF;ENSG00000108055|ENST00000361804|SMC3	ENST00000424783.1_1_2:99718519-99719212:+|nuORF	ENST00000424783.1_1_2:99718519-99719212:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.7997924685478	2	556.802957	1111.59136	0.97367	0.00054214	1.5742	0.00087652	2.5479	0.0014187	556.8040161390056	52.706	0.30323	54.678	54.48	54.783	1.9722					15	10	2	0	0	0	0.21592	1	22054	22054		31.268	11.829	1	2356200			16385	1619	7671	7705	19244	19244					0.04002896274505474
KYEDIYEMLV	10	Unmodified	_KYEDIYEMLV_					0	0	0		nc|ENSG00000008196|Q92481-2|TFAP2B	nc|ENSG00000008196|Q92481-2|TFAP2B	nc|ENSG00000008196|Q92481-2|TFAP2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8820983767509	3	434.881057	1301.62134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.35	1	111.51	111.01	112.01	0.16445								0	0	0	0.66254	1	48326	48326		0.15932	0	1				16386	7811	7672	7706	19245	19245					-0.017405328424729305
KYEELFPAF	9	Unmodified	_KYEELFPAF_					0	0	0		ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2910034060478	2	572.289682	1142.56481	2.5129	0.0014381	-0.24407	-0.00013968	2.2688	0.0012984	572.2895538924121	63.388	0.96819	64.801	64.471	65.44	1.4134					96	30	5	0	0	0	0.024001	5	26572	26533;26572;26611;26650;26696		96.111	43.843	1	43118000			16387	1515	7673	7707	19246;19247;19248;19249;19250	19247					-0.0007679261682369543
KYEELFPAF	9	Unmodified	_KYEELFPAF_					0	0	0		ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	ENSG00000105402|ENST00000263354|NAPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2908203005791	2	572.289682	1142.56481	2.519	0.0014416	-0.68991	-0.00039483	1.8291	0.0010468	572.2893179777415	62.829	0.93832	64.773	64.407	65.345	1.9444					91	29	5	0	0	0	0.024001	4	26336	26286;26336;26375;26416		96.111	43.843	1	33755000			16388	1515	7673	7707	19251;19252;19253;19254	19252					-0.0007679261682369543
KYEKIDDR	8	Unmodified	_KYEKIDDR_					0	0	0			REV__nc|ENSG00000185963|Q8TD16|BICD2	REV__nc|ENSG00000185963|Q8TD16|BICD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.9638549685478	2	533.780013	1065.54547	0.56158	0.00029976	-1.357	-0.00072433	-0.7954	-0.00042457	533.779869858614	17.771	0.26653	19.218	19.079	19.346	1.448					15	8	2	0	0	0	2.3239	1	7344	7344		23.148	2.6948	1	788770	+		16389	8165	7674	7708	19255	19255					0.015322510922487709
KYFDKVVTL	9	Unmodified	_KYFDKVVTL_					0	0	0		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8213989138603	2	556.82115	1111.62775	0.33866	0.00018858	-1.1028	-0.00061406	-0.76414	-0.00042549	556.8204044270748	37.058	0.24541	38.342	38.254	38.499	1.284					33	19	2	0	0	0	0.018305	2	15558	15558;15608		100.71	42.03	1	5208100			16390	3921	7675	7709	19256;19257	19256					0.07639773171240449
KYFEKQFEL	9	Unmodified	_KYFEKQFEL_					0	0	0		nc|ENSG00000147687|Q6P1N9-2|TATDN1;ENSG00000147687|ENST00000276692|TATDN1;ENST00000521973.5_1_8:125516164-125531109:-|nuORF	nc|ENSG00000147687|Q6P1N9-2|TATDN1	nc|ENSG00000147687|Q6P1N9-2|TATDN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	411.5513488650322	3	411.216768	1230.62847	0.063832	2.6249E-05	0.23887	9.8227E-05	0.3027	0.00012448	411.21675154655145	35.336	0.31238	36.611	36.471	36.783	1.2746					52	29	2	0	0	0	0.11606	2	14822	14822;14862		43.982	22.445	1	5993900			16391	3191	7676	7710	19258;19259	19258					0.02238567820290882
KYFEVPSVL	9	Unmodified	_KYFEVPSVL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3010131716728	2	541.30005	1080.58555	0.91021	0.00049269	0.061875	3.3493E-05	0.97208	0.00052619	541.3002580881866	58.399	0.45743	59.817	59.578	60.035	1.4181					29	14	3	0	0	0	0.060242	2	24497	24446;24497		63.961	13.105	1	5118500			16392	2509	7677	7711	19260;19261	19261					0.04847797762840855
KYFEVPSVL	9	Unmodified	_KYFEVPSVL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2995483279228	2	541.30005	1080.58555	0.57075	0.00030895	1.0331	0.00055924	1.6039	0.00086819	541.3007886898932	57.798	0.44707	59.767	59.606	60.053	1.969					32	15	3	0	0	0	0.04812	3	24265	24218;24265;24313		69.105	27.01	1	3117500			16393	2509	7677	7711	19262;19263;19264	19263					0.04847797762840855
KYFEVPSVLL	10	Unmodified	_KYFEVPSVLL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8431884646416	2	597.842082	1193.66961	3.0357	0.0018149	-0.98867	-0.00059107	2.047	0.0012238	597.8414668359168	70.466	0.44997	71.82	71.616	72.066	1.3536					35	13	4	0	0	0	0.045734	3	29578	29534;29578;29615		80.676	32.927	1	7067300			16394	2509	7678	7712	19265;19266;19267	19266					0.08052328859753288
KYFEVPSVLL	10	Unmodified	_KYFEVPSVLL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8423950076103	2	597.842082	1193.66961	2.7109	0.0016207	-1.6157	-0.00096595	1.0952	0.00065476	597.8410978970609	69.98	0.44858	71.817	71.593	72.041	1.8378					38	13	4	0	0	0	0.06111	3	29355	29307;29355;29398		74.2	25.854	1	5462300			16395	2509	7678	7712	19268;19269;19270	19269					0.08052328859753288
KYFHHFTLSL	10	Unmodified	_KYFHHFTLSL_					0	0	0		CELSR2-KIAA1324|1|fusion;ENST00000369936.2_1_1:109730792-109745631:+|nuORF;ENST00000369938.5_1_1:109730226-109745631:+|nuORF;nc|ENSG00000116299|Q6UXG2-3|ELAPOR1;ENST00000527996.5_1_1:109656894-109745573:+|nuORF;nc|ENSG00000116299|Q6UXG2-2|ELAPOR1;nc|ENSG00000116299|Q6UXG2-4|ELAPOR1;ENSG00000116299|ENST00000369939|ELAPOR1	CELSR2-KIAA1324|1|fusion	CELSR2-KIAA1324|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	647.3489257693291	2	646.842948	1291.67134	2.2729	0.0014702	4.1591	0.0026903	6.432	0.0041605	646.8456263553869	51.106	0.31776	51.106	50.913	51.23	0					14	9	2	0	0	0	0.72878	1	21312	21312		17.113	1.8644	1	670970			16396	147	7679	7713	19271	19271					0.03717382668378377
KYFNQIVGF	9	Unmodified	_KYFNQIVGF_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3003417849541	2	558.297842	1114.58113	1.596	0.00089103	0.18828	0.00010511	1.7843	0.00099615	558.2990730605006	54.096	0.17568	55.501	55.438	55.613	1.4048					7	5	2	0	0	0	0.11478	1	22656	22656		44.407	14.182	1	1078300			16397	3064	7680	7714	19272	19272					0.028423333399359763
KYFNQIVGF	9	Unmodified	_KYFNQIVGF_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	558.297842	1114.58113	0.73907	0.00041262	-1.3809	-0.00077093	-0.6418	-0.00035831	558.2974754210219	53.54	0.15512	55.509	55.44	55.595	1.9697	0.0041807	-0.00066505	NaN	44.407	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	825450			16398	3064	7680	7714							0.028423333399359763
KYFPYLVVI	9	Unmodified	_KYFPYLVVI_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.3382446169853	2	571.336436	1140.65832	2.722	0.0015552	2.7381	0.0015644	5.4601	0.0031195	571.3376715468368	75.269	0.45596	76.575	76.343	76.799	1.3063					34	14	3	0	0	0	0.49082	1	31583	31583		15.847	1.9411	1	1845400			16399	4173	7681	7715	19273	19273					0.09361551556276027
KYFPYLVVI	9	Unmodified	_KYFPYLVVI_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.3392822146416	2	571.336436	1140.65832	2.8569	0.0016322	2.5738	0.0014705	5.4307	0.0031027	571.3372246040108	74.82	0.46534	76.601	76.389	76.854	1.7817					31	14	3	0	0	0	0.39927	2	31373	31373;31430		20.454	1.0146	1	2013500			16400	4173	7681	7715	19274;19275	19274					0.09361551556276027
KYFQGDLQLF	10	Unmodified	_KYFQGDLQLF_					0	0	0		ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2;ENSG00000005882|ENST00000503176|PDK2	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8284179568291	2	629.826963	1257.63937	2.6046	0.0016404	0.99862	0.00062896	3.6032	0.0022694	629.8271036705567	62.088	0.41248	63.506	63.303	63.715	1.4177					37	12	4	0	0	0	0.043952	2	26068	26017;26068		92.653	41.024	1	3673000			16401	495	7682	7716	19276;19277	19277					0.02085970194548281
KYFQGDLQLF	10	Unmodified	_KYFQGDLQLF_					0	0	0		ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2;ENSG00000005882|ENST00000503176|PDK2	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.8282958865166	2	629.826963	1257.63937	1.8521	0.0011665	1.0712	0.00067467	2.9233	0.0018412	629.827394318408	61.557	0.41496	63.514	63.274	63.689	1.9571					38	12	4	0	0	0	0.064287	2	25834	25786;25834		114.65	54.575	1	4215400			16402	495	7682	7716	19278;19279	19279					0.02085970194548281
KYGIQMPAF	9	Unmodified	_KYGIQMPAF_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7701293826103	2	527.773145	1053.53174	1.1398	0.00060157	-2.0666	-0.0010907	-0.92677	-0.00048913	527.771655864799	53.672	0.49152	55.072	54.733	55.225	1.4005					27	21	2	0	0	0	0.22519	1	22507	22507		30.225	8.4782	1	6227000			16403	2927	7683	7717	19280	19280					0.007113020594943009
KYGIQMPAF	9	Unmodified	_KYGIQMPAF_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7737304568291	2	527.773145	1053.53174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.162	1	55.132	54.632	55.632	1.9697								0	0	0	0.036752	1	22272	22272		67.344	22.937	1				16404	2927	7683	7717	19281	19281					0.007113020594943009
KYGIVQEFF	9	Unmodified	_KYGIVQEFF_					0	0	0		nc|ENSG00000149639|O94964-1|MTCL2;AURKA-SOGA1|1|fusion;ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-3|MTCL2	nc|ENSG00000149639|O94964-1|MTCL2	nc|ENSG00000149639|O94964-1|MTCL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7990600466728	2	565.797675	1129.5808	3.1712	0.0017943	-0.62581	-0.00035408	2.5454	0.0014402	565.7974434003758	61.13	0.43197	62.549	62.314	62.746	1.4196					31	13	3	0	0	0	0.044893	2	25653	25599;25653		71.922	25.901	1	6397800			16405	96	7684	7718	19282;19283	19283					0.02118913620074636
KYGIVQEFF	9	Unmodified	_KYGIVQEFF_					0	0	0		nc|ENSG00000149639|O94964-1|MTCL2;AURKA-SOGA1|1|fusion;ENSG00000149639|ENST00000237536|SOGA1;nc|ENSG00000149639|O94964-3|MTCL2	nc|ENSG00000149639|O94964-1|MTCL2	nc|ENSG00000149639|O94964-1|MTCL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7988769412041	2	565.797675	1129.5808	3.3887	0.0019173	-1.0145	-0.00057401	2.3742	0.0013433	565.7971466278119	60.565	0.40533	62.53	62.324	62.729	1.9653					33	12	4	0	0	0	0.037098	2	25417	25366;25417		78.728	30.382	1	5454200			16406	96	7684	7718	19284;19285	19285					0.02118913620074636
KYGPVFSF	8	Unmodified	_KYGPVFSF_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7472717165947	2	472.747453	943.480354	0.82392	0.00038951	1.8736	0.00088574	2.6975	0.0012752	472.74811935352307	51.094	0.45612	52.487	52.287	52.743	1.3938					42	14	4	0	0	0	0.39757	2	21348	21348;21393		54.774	6.4277	1	11509000			16407	458	7685	7719	19286;19287	19286					0.006353013570901567
KYGPVFSF	8	Unmodified	_KYGPVFSF_					0	0	0		ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	ENSG00000001630|ENST00000003100|CYP51A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7479431033134	2	472.747453	943.480354	1.0738	0.00050762	0.65651	0.00031036	1.7303	0.00081799	472.7474688735256	50.511	0.41946	52.486	52.277	52.697	1.9753					38	13	4	0	0	0	0.30755	2	21159	21159;21199		71.134	3.7897	1	11876000			16408	458	7685	7719	19288;19289	19288					0.006353013570901567
KYGVTFYNF	9	Unmodified	_KYGVTFYNF_					0	0	0		ENST00000510737.1_1_4:120160395-120160458:+|nuORF	ENST00000510737.1_1_4:120160395-120160458:+|nuORF	ENST00000510737.1_1_4:120160395-120160458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.7833740115166	2	569.782025	1137.5495	0.75806	0.00043193	1.4776	0.00084193	2.2357	0.0012739	569.7829955929438	53.027	0.38555	54.428	54.248	54.633	1.4005					33	11	4	0	0	0	0.053939	3	22197	22149;22197;22237		66.457	32.354	1	6802500			16409	7029	7686	7720	19290;19291;19292	19291					-0.013776594140153975
KYGVTFYNF	9	Unmodified	_KYGVTFYNF_					0	0	0		ENST00000510737.1_1_4:120160395-120160458:+|nuORF	ENST00000510737.1_1_4:120160395-120160458:+|nuORF	ENST00000510737.1_1_4:120160395-120160458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.7831909060478	2	569.782025	1137.5495	1.2171	0.00069348	0.2543	0.00014489	1.4714	0.00083837	569.7824529029616	52.458	0.41233	54.43	54.228	54.641	1.9722					35	12	4	0	0	0	0.053939	3	21984	21934;21984;22026		66.457	37.375	1	6502900			16410	7029	7686	7720	19293;19294;19295	19294					-0.013776594140153975
KYIDFDHVF	9	Unmodified	_KYIDFDHVF_					0	0	0		ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.2936279177666	2	592.292756	1182.57096	1.73	0.0010247	2.2107	0.0013094	3.9407	0.0023341	592.2929621526902	50.76	0.69778	52.154	51.77	52.468	1.3938					55	22	3	0	0	0	0.024001	2	21175	21128;21175		96.111	73.453	1	3149100			16411	522	7687	7721	19296;19297	19297					-0.013022743853071006
KYIDFDHVF	9	Unmodified	_KYIDFDHVF_					0	0	0		ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.2905151247978	2	592.292756	1182.57096	1.6819	0.0009962	-3.2117	-0.0019023	-1.5297	-0.00090605	592.2889984885908	50.019	0.5214	51.996	51.758	52.279	1.9772					32	16	3	0	0	0	0.037098	1	20986	20986		78.728	53.329	1	2480000			16412	522	7687	7721	19298	19298					-0.013022743853071006
KYIDQKFVL	9	Unmodified	_KYIDQKFVL_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D;ENST00000467447.1_1_6:42974755-42975804:+|nuORF;nc|ENSG00000112640|Q14738-3|PPP2R5D;nc|ENSG00000112640|Q14738-2|PPP2R5D;ENST00000495716.1_1_3:52407964-52408519:+|nuORF;nc|ENSG00000154001|Q16537-3|PPP2R5E;nc|ENSG00000154001|Q16537-2|PPP2R5E;ENSG00000154001|ENST00000337537|PPP2R5E;nc|ENSG00000078304|Q13362-2|PPP2R5C;nc|ENSG00000078304|Q13362-3|PPP2R5C;nc|ENSG00000078304|Q13362|PPP2R5C;nc|ENSG00000078304|Q13362-4|PPP2R5C;nc|ENSG00000078304|Q13362-5|PPP2R5C;RCOR1-PPP2R5C|2|fusion;ENSG00000078304|ENST00000694906|PPP2R5C;RCOR1-PPP2R5C|3|fusion;RCOR1-PPP2R5C|1|fusion	ENSG00000112640|ENST00000485511|PPP2R5D;nc|ENSG00000078304|Q13362-2|PPP2R5C	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8354980349541	2	577.334424	1152.6543	0.16619	9.5946E-05	0.56481	0.00032608	0.731	0.00042203	577.3347378448755	35.95	0.30907	37.226	37.074	37.383	1.2762					40	17	3	0	0	0	0.014446	2	15109	15062;15109		103.82	54.269	1	4871700			16413	1790;976	7688	7722	19299;19300	19300					0.08407462062564264
KYIDYIFNV	9	Unmodified	_KYIDYIFNV_					0	0	0		nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8125488162041	2	587.810782	1173.60701	2.5212	0.001482	0.46775	0.00027495	2.989	0.001757	587.8113290686488	64.012	0.47233	65.419	65.207	65.679	1.4071					35	14	3	0	0	0	0.0022704	1	26861	26861		129.77	44.131	1	7780600			16414	2842	7689	7723	19301	19301					0.027151827915531612
KYIDYIFNV	9	Unmodified	_KYIDYIFNV_					0	0	0		nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8122436404228	2	587.810782	1173.60701	2.5885	0.0015216	-0.10117	-5.9468E-05	2.4874	0.0014621	587.8109574962168	63.482	0.44585	65.426	65.183	65.629	1.9444					36	13	3	0	0	0	0.00020031	2	26624	26624;26666		142.08	45.969	1	7083200			16415	2842	7689	7723	19302;19303	19302					0.027151827915531612
KYIENLDNITF	11	Unmodified	_KYIENLDNITF_					0	0	0		ENST00000512558.5_1_5:79729945-79747536:+|nuORF;ENSG00000039319|ENST00000505560|ZFYVE16	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	685.3529540896416	2	685.353542	1368.69253	1.6138	0.001106	0.63864	0.00043769	2.2524	0.0015437	685.3536890605599	56.896	0.21639	58.311	58.153	58.369	1.4145					12	6	2	0	0	0	0.13365	1	23824	23824		49.742	28.205	1	1802200			16416	657	7690	7724	19304	19304					0.02293303186547746
KYIENLDNITF	11	Unmodified	_KYIENLDNITF_					0	0	0		ENST00000512558.5_1_5:79729945-79747536:+|nuORF;ENSG00000039319|ENST00000505560|ZFYVE16	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	685.353542	1368.69253	0.55824	0.00038259	0.50806	0.0003482	1.0663	0.0007308	685.353753233559	56.306	0.24545	58.274	58.149	58.394	1.9684	-0.018223	-9.3803E-05	NaN	49.742	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1517400			16417	657	7690	7724							0.02293303186547746
KYIIELNHM	9	Unmodified	_KYIIELNHM_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000565479.5_1_16:30104033-30107516:-|nuORF	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8088867068291	2	580.810259	1159.60597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.251	1	37.527	37.027	38.027	1.2762								0	0	0	0.26308	1	15218	15218		21.537	6.6987	1				16418	1134	7691	7725	19305	19305					0.032546451510143015
KYIKDDFRF	9	Unmodified	_KYIKDDFRF_					0	0	0		ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;ENSG00000101782|ENST00000339486|RIOK3	ENST00000581302.5_1_18:21033283-21057068:+|nuORF	ENST00000581302.5_1_18:21033283-21057068:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2216369509697	3	411.220513	1230.63971	0.65164	0.00026797	-0.31618	-0.00013002	0.33546	0.00013795	411.2200637797577	27.638	0.52566	29.413	29.233	29.759	1.7754					22	16	2	0	0	0	0.72823	1	11638	11638		6.6304	4.1319	1	444230			16419	1365	7692	7726	19306	19306					0.03361389914380197
KYIKDDFRF	9	Unmodified	_KYIKDDFRF_					0	0	0		ENST00000581302.5_1_18:21033283-21057068:+|nuORF;nc|ENSG00000101782|O14730-2|RIOK3;ENSG00000101782|ENST00000339486|RIOK3	ENST00000581302.5_1_18:21033283-21057068:+|nuORF	ENST00000581302.5_1_18:21033283-21057068:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	411.220513	1230.63971	0.76455	0.0003144	-0.73537	-0.0003024	0.029184	1.2001E-05	411.5547318787045	28.382	0.51676	29.661	29.335	29.852	1.2789	0.12391	-0.00021851	NaN	6.6304	21	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515140			16420	1365	7692	7726							0.03361389914380197
KYIPELAYY	9	Unmodified	_KYIPELAYY_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3057128787041	2	580.305332	1158.59611	2.2623	0.0013128	-0.31187	-0.00018098	1.9504	0.0011318	580.3048407621623	47.381	0.32439	48.763	48.63	48.954	1.3825					13	9	2	0	0	0	0.55689	1	19828	19828		13.042	2.9685	1	535590			16421	3292	7693	7727	19307	19307					0.02315780417256974
KYITDVVKL	9	Unmodified	_KYITDVVKL_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2211181521416	3	360.221742	1077.6434	0.65775	0.00023693	-1.1154	-0.00040177	-0.45761	-0.00016484	360.221192975308	38.262	0.1568	40.083	40.036	40.193	1.8202					6	4	2	0	0	0	0.78661	1	16063	16063		3.8763	1.5936	1	407690			16422	2118	7694	7728	19308	19308					0.10768059688280118
KYITDWQNVF	10	Unmodified	_KYITDWQNVF_					0	0	0		nc|ENSG00000249915|O75340-2|PDCD6;ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF	nc|ENSG00000249915|O75340-2|PDCD6	nc|ENSG00000249915|O75340-2|PDCD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3321411013603	2	657.32987	1312.64519	2.8344	0.0018632	0.21491	0.00014127	3.0493	0.0020044	657.3300211351068	61.355	0.61238	62.773	62.563	63.176	1.4177					72	19	6	0	0	0	0.049285	4	25740	25690;25740;25780;25825		106.94	74.154	1	54011000			16423	5377	7695	7729	19309;19310;19311;19312	19310					0.0013706870620353584
KYITDWQNVF	10	Unmodified	_KYITDWQNVF_					0	0	0		nc|ENSG00000249915|O75340-2|PDCD6;ENSG00000249915|ENST00000264933|PDCD6;ENST00000505526.1_1_5:271863-311637:+|nuORF	nc|ENSG00000249915|O75340-2|PDCD6	nc|ENSG00000249915|O75340-2|PDCD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.3314086794853	2	657.32987	1312.64519	2.8671	0.0018847	-0.15457	-0.0001016	2.7126	0.0017831	657.3296680926067	60.839	0.61049	62.804	62.577	63.187	1.9653					66	19	5	0	0	0	0.0641	3	25519	25474;25519;25571		110.55	72.538	1	50152000			16424	5377	7695	7729	19313;19314;19315	19314					0.0013706870620353584
KYITQGQLLQF	11	Unmodified	_KYITQGQLLQF_					0	0	0		ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	669.8753539919853	2	669.874445	1337.73434	1.4084	0.00094348	0.18835	0.00012617	1.5968	0.0010697	669.8744901548006	54.701	0.45625	56.106	55.899	56.355	1.4048					39	14	4	0	0	0	0.0013356	2	22863	22863;22908		128.57	68.499	1	11654000			16425	577	7696	7730	19316;19317	19316					0.07897903665752892
KYITQGQLLQF	11	Unmodified	_KYITQGQLLQF_					0	0	0		ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	669.8751708865166	2	669.874445	1337.73434	1.6313	0.0010928	0.27487	0.00018413	1.9062	0.0012769	669.8746677563785	54.213	0.46883	56.182	55.97	56.439	1.9684					42	14	4	0	0	0	0.0054879	3	22724	22674;22724;22767		111.31	59.679	1	9261400			16426	577	7696	7730	19318;19319;19320	19319					0.07897903665752892
KYKFTHLSSSL	11	Unmodified	_KYKFTHLSSSL_					0	0	0		tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	437.2684509158134	3	437.574955	1309.70304	1.2989	0.00056838	4.0927	0.0017908	5.3916	0.0023592	437.5772809012205	42.124	0.18222	42.124	42.075	42.257	0					12	5	3	0	0	0	0.14606	1	17639	17639		1.2148	0	1	605180			16427	16475	7697	7731	19321	19321					0.060573306316882736
KYKGIFNGF	9	Unmodified	_KYKGIFNGF_					0	0	0		ENST00000547908.1_1_12:98989476-98991822:+|nuORF;ENST00000551123.5_1_12:98989412-98995303:+|nuORF;ENST00000546766.5_1_12:98989476-98995303:+|nuORF;ENSG00000075415|ENST00000552981|SLC25A3;nc|ENSG00000075415|Q00325|SLC25A3	ENST00000547908.1_1_12:98989476-98991822:+|nuORF	ENST00000547908.1_1_12:98989476-98991822:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.5304443240166	3	358.530798	1072.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.55	1	38.368	37.868	38.868	1.8176								0	0	0	0.317	1	15333	15333		11.495	4.7715	1				16428	931	7698	7732	19322	19322					0.0371835068551718
KYKMWYIWHIR	11	Unmodified	_KYKMWYIWHIR_					0	0	0			REV__ENST00000312814.10_1_7:112424908-112424962:-|nuORF	REV__ENST00000312814.10_1_7:112424908-112424962:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	541.9629394412041	3	541.958746	1622.85441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.339	1	19.339	18.839	19.839	0								0	0	0	0.63775	1	8036	8036		0.08335	0	1		+		16429	12373	7699	7733	19323	19323					0.06789613458522581
KYLAILGSVTF	11	Unmodified	_KYLAILGSVTF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3574706912041	2	606.355357	1210.69616	3.354	0.0020337	1.7226	0.0010445	5.0767	0.0030783	606.3567192098475	72.754	0.59303	74.084	73.913	74.506	1.3297					44	18	3	0	0	0	0.026083	3	30555	30507;30555;30610		93.938	42.523	1	7698400			16430	2045	7700	7734	19324;19325;19326	19325					0.09924017751086467
KYLAILGSVTF	11	Unmodified	_KYLAILGSVTF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3575927615166	2	606.355357	1210.69616	2.7205	0.0016496	1.7972	0.0010897	4.5177	0.0027393	606.356557137415	72.279	0.49209	74.089	73.861	74.353	1.8101					40	15	3	0	0	0	0.023369	3	30332	30284;30332;30387		96.936	39.214	1	8256200			16431	2045	7700	7734	19327;19328;19329	19328					0.09924017751086467
KYLDALNVF	9	Unmodified	_KYLDALNVF_					0	0	0		ENSG00000166398|ENST00000299505|GARRE1	ENSG00000166398|ENST00000299505|GARRE1	ENSG00000166398|ENST00000299505|GARRE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7991210818291	2	541.797675	1081.5808	2.3217	0.0012579	1.2797	0.00069336	3.6014	0.0019513	541.7963280841607	61.237	0.34061	63.202	63.004	63.345	1.9653					16	10	2	0	0	0	0.22861	1	25677	25677		29.841	0.759	1	3161400			16432	3899	7701	7735	19330	19330					0.04326913620070627
KYLDVKFEYL	10	Unmodified	_KYLDVKFEYL_					0	0	0		nc|ENSG00000100151|Q9NRD5-2|PICK1;ENST00000484021.5_1_22:38453431-38470088:+|nuORF;ENSG00000100151|ENST00000356976|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.9073974490166	3	439.907823	1316.70164	1.0102	0.0004444	1.5146	0.00066627	2.5248	0.0011107	439.9082696379158	52.897	0.32148	54.298	54.152	54.473	1.4005					16	9	2	0	0	0	0.81796	1	22137	22137		10.315	3.2135	1	1555800			16433	1248	7702	7736	19331	19331					0.055956965429231786
KYLDVKFEYL	10	Unmodified	_KYLDVKFEYL_					0	0	0		nc|ENSG00000100151|Q9NRD5-2|PICK1;ENST00000484021.5_1_22:38453431-38470088:+|nuORF;ENSG00000100151|ENST00000356976|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	nc|ENSG00000100151|Q9NRD5-2|PICK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.3605834841728	2	659.358096	1316.70164	0.61442	0.00040512	0.86117	0.00056782	1.4756	0.00097294	659.360013539839	52.929	0.22613	54.329	54.184	54.41	1.4005					11	6	2	0	0	0	0.19853	1	22151	22151		48.073	20.85	1	915470			16434	1248	7702	7736	19332	19332					0.055956965429231786
KYLEEFITNI	10	Unmodified	_KYLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	635.3411132693291	2	635.339904	1268.66525	1.8075	0.0011484	0.92	0.00058451	2.7275	0.0017329	635.3404463575829	63.661	0.40475	65.068	64.9	65.305	1.4071					21	12	2	0	0	0	0.05462	1	26700	26700		90.135	46.363	1	1781300			16435	3064	7703	7737	19333	19333					0.04166819646206932
KYLEEFITNI	10	Unmodified	_KYLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	635.3430663943291	2	635.339904	1268.66525	1.7631	0.0011202	0.63155	0.00040125	2.3946	0.0015214	635.3407737181875	63.053	0.30825	64.997	64.875	65.183	1.9444					23	9	3	0	0	0	0.33708	1	26502	26502		37.075	15.538	1	1442100			16436	3064	7703	7737	19334	19334					0.04166819646206932
KYLEENVMRHF	11	Unmodified	_KYLEENVMRHF_					0	0	0		nc|ENSG00000126016|Q4VCS5-2|AMOT;ENSG00000126016|ENST00000371959|AMOT	nc|ENSG00000126016|Q4VCS5-2|AMOT	nc|ENSG00000126016|Q4VCS5-2|AMOT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.5817138552666	3	489.246733	1464.71837	1.02	0.00049903	0.53126	0.00025992	1.5513	0.00075895	489.58105492629335	28.818	0.27439	30.1	29.917	30.191	1.2825					12	8	2	0	0	0	0.82764	1	12098	12098		14.171	12.716	1	1104200			16437	2297	7704	7738	19335	19335					0.004598741571953724
KYLEERAMRQF	11	Unmodified	_KYLEERAMRQF_					0	0	0		ENST00000506326.1_1_3:134076549-134085275:-|nuORF;nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;nc|ENSG00000114019|Q9Y2J4|AMOTL2;ENSG00000114019|ENST00000249883|AMOTL2;nc|ENSG00000114019|Q9Y2J4-4|AMOTL2	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.9229308962822	3	490.922249	1469.74492	1.0707	0.00052561	-0.15819	-7.766E-05	0.91247	0.00044795	491.25690312743075	21.536	0.51627	22.713	22.505	23.022	1.177					35	16	3	0	0	0	1.0308	1	8988	8988		1.9275	1.473	1	843330			16438	1844	7705	7739	19336	19336					0.028835630485218644
KYLEERAMRQF	11	Unmodified	_KYLEERAMRQF_					0	0	0		ENST00000506326.1_1_3:134076549-134085275:-|nuORF;nc|ENSG00000114019|Q9Y2J4-3|AMOTL2;nc|ENSG00000114019|Q9Y2J4|AMOTL2;ENSG00000114019|ENST00000249883|AMOTL2;nc|ENSG00000114019|Q9Y2J4-4|AMOTL2	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	ENST00000506326.1_1_3:134076549-134085275:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.9232055544853	3	490.922249	1469.74492	0.57219	0.0002809	0.20566	0.00010096	0.77784	0.00038186	490.92256277313993	21.093	0.41902	22.667	22.499	22.918	1.5748					30	13	4	0	0	0	1.0032	1	8794	8794		3.5927	2.3778	1	769580			16439	1844	7705	7739	19337	19337					0.028835630485218644
KYLEMIYSM	9	Unmodified	_KYLEMIYSM_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.2856323122978	2	589.285228	1176.5559	1.3872	0.00081745	-0.61273	-0.00036108	0.77446	0.00045638	589.2848698955049	55.274	0.46195	56.684	56.504	56.966	1.4099					37	15	3	0	0	0	0.043696	2	23172	23121;23172		72.968	34.994	1	3305200			16440	5178	7706	7740	19338;19339	19339					-0.025312255691687824
KYLEMIYSM	9	Unmodified	_KYLEMIYSM_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2851440310478	2	589.285228	1176.5559	0.94095	0.00055449	-0.64831	-0.00038204	0.29264	0.00017245	589.2847672449395	54.82	0.49466	56.789	56.61	57.105	1.9684					34	16	3	0	0	0	0.033102	2	22966	22966;23018		82.529	40.69	1	3104500			16441	5178	7706	7740	19340;19341	19340					-0.025312255691687824
KYLESFLAF	9	Unmodified	_KYLESFLAF_					0	0	0		ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3010131716728	2	559.30005	1116.58555	2.94	0.0016443	3.1982	0.0017887	6.1382	0.0034331	559.3010943523387	70.287	0.34373	71.64	71.336	71.679	1.3536					27	10	4	0	0	0	0.033504	1	29460	29460		81.89	29.622	1	6126500			16442	2232	7707	7741	19342	19342					0.03191797762860915
KYLESFLAF	9	Unmodified	_KYLESFLAF_					0	0	0		ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	ENSG00000124571|ENST00000265351|XPO5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3016235232353	2	559.30005	1116.58555	2.6575	0.0014863	1.9925	0.0011144	4.65	0.0026008	559.3010301844826	69.697	0.2836	71.54	71.315	71.598	1.8434					19	8	3	0	0	0	0.070055	1	29231	29231		60.074	10.141	1	5630400			16443	2232	7707	7741	19343	19343					0.03191797762860915
KYLINLETL	9	Unmodified	_KYLINLETL_					0	0	0		JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant;JAK2|p.Y913Vfs*12|1|0.15|ENSG00000096968|chr9:5089834-5089835|-/A|frameshift_variant;ENSG00000096968|ENST00000381652|JAK2	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8286620974541	2	553.826432	1105.63831	3.0777	0.0017045	1.3554	0.00075066	4.4331	0.0024552	553.8273925379086	60.947	0.38219	62.366	62.153	62.535	1.4196					27	11	3	0	0	0	0.079895	2	25590	25535;25590		56.177	6.244	1	2208000			16444	1197	7708	7742	19344;19345	19345					0.08971755825655237
KYLINLETL	9	Unmodified	_KYLINLETL_					0	0	0		JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant;JAK2|p.Y913Vfs*12|1|0.15|ENSG00000096968|chr9:5089834-5089835|-/A|frameshift_variant;ENSG00000096968|ENST00000381652|JAK2	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	JAK2|p.C616Vfs*14|1|0.06|ENSG00000096968|chr9:5073766-5073766|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8285400271416	2	553.826432	1105.63831	3.233	0.0017905	1.129	0.00062528	4.362	0.0024158	553.827737737945	60.406	0.31441	62.371	62.167	62.482	1.9653					20	9	3	0	0	0	0.057024	1	25328	25328		65.235	12.967	1	2245000			16445	1197	7708	7742	19346	19346					0.08971755825655237
KYLIPPVPPKN	11	Unmodified	_KYLIPPVPPKN_					0	0	0		tr|A0A7D6ZZ78|A0A7D6ZZ78_9CLOTYgiQfamilyradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05060PE=3SV=1	tr|A0A7D6ZZ78|A0A7D6ZZ78_9CLOTYgiQfamilyradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05060PE=3SV=1	tr|A0A7D6ZZ78|A0A7D6ZZ78_9CLOTYgiQfamilyradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05060PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1956970095634	4	317.195862	1264.75434	0.14832	4.7045E-05	-0.28981	-9.1926E-05	-0.14149	-4.4881E-05	317.19572652283154	33.632	0.37411	35.455	35.255	35.629	1.8227					80	35	3	0	0	0	1.0362	1	14121	14121		1.3296	0	1	55195000			16446	17207	7709	7743	19347	19347					0.13255699396381715
KYLPEWTAW	9	Unmodified	_KYLPEWTAW_					0	0	0		nc|ENSG00000080815|P49768-3|PSEN1;nc|ENSG00000080815|P49768-5|PSEN1;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;ENSG00000080815|ENST00000324501|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3044921755791	2	597.303124	1192.5917	3.1354	0.0018728	1.2591	0.00075209	4.3946	0.0026249	597.3033473904732	61.191	0.45834	62.611	62.409	62.867	1.4196					26	14	3	0	0	0	0.075994	2	25689	25640;25689		57.722	25.416	1	3876500			16447	1009	7710	7744	19348;19349	19349					0.0031031599437483237
KYLPEWTAW	9	Unmodified	_KYLPEWTAW_					0	0	0		nc|ENSG00000080815|P49768-3|PSEN1;nc|ENSG00000080815|P49768-5|PSEN1;nc|ENSG00000080815|P49768-6|PSEN1;nc|ENSG00000080815|P49768-7|PSEN1;nc|ENSG00000080815|P49768-2|PSEN1;ENSG00000080815|ENST00000324501|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	nc|ENSG00000080815|P49768-3|PSEN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3049194216728	2	597.303124	1192.5917	3.3388	0.0019943	-0.076879	-4.592E-05	3.262	0.0019484	597.3029362974305	60.647	0.40345	62.612	62.387	62.79	1.9653					25	12	3	0	0	0	0.04812	2	25418	25418;25469		69.105	36.319	1	3192100			16448	1009	7710	7744	19350;19351	19350					0.0031031599437483237
KYLPVIIFLR	10	Unmodified	_KYLPVIIFLR_					0	0	0		ENST00000419038.2_1_2:63870904-63871126:-|nuORF	ENST00000419038.2_1_2:63870904-63871126:-|nuORF	ENST00000419038.2_1_2:63870904-63871126:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.4063598513603	2	631.405184	1260.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.32	1	113.36	112.86	113.86	0.044189								0	0	0	0.6624	1	48812	48812		0.40072	0	1				16449	6433	7711	7745	19352	19352					0.17584880155663996
KYLQSTISF	9	Unmodified	_KYLQSTISF_					0	0	0		ENST00000457179.5_1_22:22317029-22324763:-|nuORF;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;nc|ENSG00000100038|O95985-3|TOP3B;nc|ENSG00000100038|O95985-2|TOP3B;ENSG00000100038|ENST00000357179|TOP3B	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7958251833916	2	543.795132	1085.57571	2.1023	0.0011432	0.094803	5.1553E-05	2.1971	0.0011948	543.7946638633065	41.594	0.41295	42.919	42.683	43.096	1.3254					29	12	3	0	0	0	0.11643	1	17411	17411		43.858	5.8843	1	2156200			16450	1232	7712	7746	19353	19353					0.036346097574551095
KYLQSTISF	9	Unmodified	_KYLQSTISF_					0	0	0		ENST00000457179.5_1_22:22317029-22324763:-|nuORF;ENST00000444502.5_1_22:22313806-22324763:-|nuORF;nc|ENSG00000100038|O95985-3|TOP3B;nc|ENSG00000100038|O95985-2|TOP3B;ENSG00000100038|ENST00000357179|TOP3B	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	ENST00000457179.5_1_22:22317029-22324763:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7967407107353	2	543.795132	1085.57571	1.9813	0.0010774	-0.53228	-0.00028945	1.4491	0.00078799	543.7940812186476	41.144	0.4053	43.037	42.864	43.269	1.8927					27	12	3	0	0	0	0.11643	1	17227	17227		43.858	1.7637	1	2294300			16451	1232	7712	7746	19354	19354					0.036346097574551095
KYLSVQGQLF	10	Unmodified	_KYLSVQGQLF_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1;ENST00000471737.1_1_6:36936681-36938521:-|nuORF	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8304931521416	2	591.829506	1181.64446	1.4467	0.00085622	0.5155	0.00030509	1.9622	0.0011613	591.8299893922748	48.522	1.2048	49.91	49.618	50.823	1.388					112	38	5	0	0	0	0.049285	7	20312	20273;20312;20351;20390;20435;20488;20542		96.367	37.688	1	183570000			16452	2766	7713	7747	19355;19356;19357;19358;19359;19360;19361	19356					0.06090274057191891
KYLSVQGQLF	10	Unmodified	_KYLSVQGQLF_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1;nc|ENSG00000137409|Q9NZJ7-3|MTCH1;ENST00000471737.1_1_6:36936681-36938521:-|nuORF	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.8305541872978	2	591.829506	1181.64446	2.3611	0.0013974	-0.44539	-0.00026359	1.9157	0.0011338	591.8294268985823	47.998	1.2032	49.975	49.714	50.917	1.9772					120	38	5	0	0	0	0.054878	9	20078	20031;20078;20117;20156;20196;20239;20295;20344;20395		103.42	37.688	1	211550000			16453	2766	7713	7747	19362;19363;19364;19365;19366;19367;19368;19369;19370	19363					0.06090274057191891
KYLTAEAFGF	10	Unmodified	_KYLTAEAFGF_					0	0	0		ENSG00000075618|ENST00000382361|FSCN1	ENSG00000075618|ENST00000382361|FSCN1	ENSG00000075618|ENST00000382361|FSCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7951537966728	2	573.795132	1145.57571	0.63617	0.00036503	-0.48395	-0.00027769	0.15222	8.7345E-05	573.7958073710602	58.217	0.29379	59.635	59.49	59.784	1.4181					22	9	3	0	0	0	0.078293	2	24384	24384;24431		67.838	37.202	1	5309700			16454	936	7714	7748	19371;19372	19371					0.008746097574658052
KYLTAEAFGF	10	Unmodified	_KYLTAEAFGF_					0	0	0		ENSG00000075618|ENST00000382361|FSCN1	ENSG00000075618|ENST00000382361|FSCN1	ENSG00000075618|ENST00000382361|FSCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.7954589724541	2	573.795132	1145.57571	0.38158	0.00021895	0.057094	3.276E-05	0.43868	0.00025171	573.7956688437097	57.637	0.26064	59.606	59.469	59.729	1.969					18	11	2	0	0	0	0.062288	2	24157	24157;24217		96.367	65.73	1	5322300			16455	936	7714	7748	19373;19374	19373					0.008746097574658052
KYLTEGLLQF	10	Unmodified	_KYLTEGLLQF_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.L707Tfs*5|1|0.59|ENSG00000082641|chr17:48059439-48059440|-/GA|frameshift_variant	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3385497927666	2	606.337164	1210.65977	3.0044	0.0018217	0.031301	1.8979E-05	3.0357	0.0018407	606.3368253592735	65.157	0.43974	66.556	66.348	66.788	1.3989					42	13	4	0	0	0	0.05462	3	27327	27280;27327;27387		90.135	28.5	1	19327000			16456	1034	7715	7749	19375;19376;19377	19376					0.06287140854374229
KYLTEGLLQF	10	Unmodified	_KYLTEGLLQF_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.L707Tfs*5|1|0.59|ENSG00000082641|chr17:48059439-48059440|-/GA|frameshift_variant	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3381225466728	2	606.337164	1210.65977	1.9763	0.0011983	-0.1675	-0.00010156	1.8087	0.0010967	606.3369512844213	64.704	0.5387	66.632	66.325	66.864	1.928					49	16	4	0	0	0	0.05462	3	27129	27081;27129;27169		90.135	36.302	1	14250000			16457	1034	7715	7749	19378;19379;19380	19379					0.06287140854374229
KYLVIGDLLF	10	Unmodified	_KYLVIGDLLF_					0	0	0		ENST00000591770.1_1_17:76164697-76167257:+|nuORF;ENSG00000108639|ENST00000225777|SYNGR2;nc|ENSG00000108639|O43760-2|SYNGR2	ENST00000591770.1_1_17:76164697-76167257:+|nuORF	ENST00000591770.1_1_17:76164697-76167257:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8533813357353	2	590.85245	1179.69035	2.0567	0.0012152	0.34123	0.00020162	2.398	0.0014168	590.8525980975463	84.665	0.71336	85.824	85.589	86.303	1.159					63	22	4	0	0	0	0.048317	4	35530	35484;35530;35584;35640		85.642	29.464	1	13848000			16458	1642	7716	7750	19381;19382;19383;19384	19382					0.1076891923939911
KYLVIGDLLF	10	Unmodified	_KYLVIGDLLF_					0	0	0		ENST00000591770.1_1_17:76164697-76167257:+|nuORF;ENSG00000108639|ENST00000225777|SYNGR2;nc|ENSG00000108639|O43760-2|SYNGR2	ENST00000591770.1_1_17:76164697-76167257:+|nuORF	ENST00000591770.1_1_17:76164697-76167257:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8530151247978	2	590.85245	1179.69035	2.174	0.0012845	-0.34108	-0.00020153	1.8329	0.001083	590.8522421636728	84.127	0.51631	85.765	85.559	86.075	1.6379					41	16	4	0	0	0	0.048317	2	35311	35260;35311		85.642	24.284	1	16162000			16459	1642	7716	7750	19385;19386	19386					0.1076891923939911
KYLYTKEKVKK	11	Unmodified	_KYLYTKEKVKK_					0	0	0		ENSG00000174173|ENST00000309922|TRMT10C	ENSG00000174173|ENST00000309922|TRMT10C	ENSG00000174173|ENST00000309922|TRMT10C	MSMS	GG20161007_CRH_Patient100_A02_02	2	714.4330322146416	2	714.43467	1426.85479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.658	1	97.749	97.249	98.249	0.090881								0	0	0	0.63775	1	40861	40861		0.30703	0.03801	1				16460	4319	7717	7751	19387	19387					0.15843311659318715
KYMAEALLL	9	Unmodified	_KYMAEALLL_					0	0	0		ENST00000492171.1_1_3:100096542-100100595:-|nuORF;ENSG00000154174|ENST00000284320|TOMM70	ENST00000492171.1_1_3:100096542-100100595:-|nuORF	ENST00000492171.1_1_3:100096542-100100595:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2950927615166	2	526.296453	1050.57835	0.31089	0.00016362	-0.88405	-0.00046527	-0.57316	-0.00030165	526.2963963045283	56.205	0.37663	57.615	57.435	57.811	1.4099					35	14	3	0	0	0	0.10473	2	23525	23525;23569		47.749	7.3001	1	5785400			16461	3378	7718	7752	19388;19389	19388					0.055087418907760366
KYMAEALLL	9	Unmodified	_KYMAEALLL_					0	0	0		ENST00000492171.1_1_3:100096542-100100595:-|nuORF;ENSG00000154174|ENST00000284320|TOMM70	ENST00000492171.1_1_3:100096542-100100595:-|nuORF	ENST00000492171.1_1_3:100096542-100100595:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2968627810478	2	526.296453	1050.57835	0.67329	0.00035435	-1.633	-0.00085947	-0.95976	-0.00050512	526.2965606985279	55.644	0.34804	57.612	57.432	57.78	1.9684					30	15	3	0	0	0	0.086433	2	23311	23311;23360		53.833	6.9119	1	4880000			16462	3378	7718	7752	19390;19391	19390					0.055087418907760366
KYMDIEFDF	9	Unmodified	_KYMDIEFDF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;ENSG00000166866|ENST00000300119|MYO1A	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.2720214724541	2	604.270632	1206.52671	1.8241	0.0011023	-1.0529	-0.00063626	0.77119	0.00046601	604.2700213477889	67.239	1.0297	68.627	68.376	69.405	1.3887					84	33	4	0	0	0	0.026734	5	28292	28151;28199;28239;28292;28351		92.653	38.821	1	17811000			16463	2378	7719	7753	19392;19393;19394;19395;19396	19395					-0.06829046593793464
KYMDIEFDF	9	Unmodified	_KYMDIEFDF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;ENSG00000166866|ENST00000300119|MYO1A	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.2713500857353	2	604.270632	1206.52671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.876	1	69.254	68.754	69.754	1.3778								0	0	0	0.23225	1	28481	28481		23.79	8.5413	1				16464	2378	7719	7753	19397	19397					-0.06829046593793464
KYMDIEFDF	9	Unmodified	_KYMDIEFDF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;ENSG00000166866|ENST00000300119|MYO1A	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.2710449099541	2	604.270632	1206.52671	1.429	0.00086348	-1.0091	-0.00060975	0.4199	0.00025373	604.2701915653586	66.785	0.85356	68.674	68.373	69.227	1.8889					75	27	4	0	0	0	0.033102	4	28042	27954;28000;28042;28097		82.529	48.96	1	14398000			16465	2378	7719	7753	19398;19399;19400;19401	19400					-0.06829046593793464
KYMDIEFDF	9	Oxidation (M)	_KYM(Oxidation (M))DIEFDF_		KYM(1)DIEFDF		KYM(42)DIEFDF	0	0	1		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF;ENSG00000166866|ENST00000300119|MYO1A	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MSMS	GG20161007_CRH_Patient100_W632_02	4	612.2673217654228	2	612.26809	1222.52163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.602	1	57.571	57.071	58.071	1.9684								0	0	0	0.062275	1	23317	23317		41.956	22.699	1				16466	2378	7719	7754	19402	19402		45			-0.08073350456425032
KYMDINFDF	9	Oxidation (M)	_KYM(Oxidation (M))DINFDF_		KYM(1)DINFDF		KYM(83)DINFDF	0	0	1		ENSG00000176658|ENST00000318217|MYO1D;nc|ENSG00000136286|B0I1T2-3|MYO1G;MYO1G|p.N590Kfs*17|1|0.22|ENSG00000136286|chr7:44967617-44967618|-/C|frameshift_variant;nc|ENSG00000136286|B0I1T2-4|MYO1G;ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7698852419853	2	604.768257	1207.52196	0.7227	0.00043707	1.6517	0.00099889	2.3744	0.001436	604.7690943499398	52.994	0.62203	54.394	54.089	54.711	1.4005					60	19	4	0	0	0	0.033102	4	22213	22113;22160;22213;22264		82.529	21.928	1	5966200			16467	4414	7720	7755	19403;19404;19405;19406	19405		74			-0.07349930736563692
KYMDINFDF	9	Oxidation (M)	_KYM(Oxidation (M))DINFDF_		KYM(1)DINFDF		KYM(83)DINFDF	0	0	1		ENSG00000176658|ENST00000318217|MYO1D;nc|ENSG00000136286|B0I1T2-3|MYO1G;MYO1G|p.N590Kfs*17|1|0.22|ENSG00000136286|chr7:44967617-44967618|-/C|frameshift_variant;nc|ENSG00000136286|B0I1T2-4|MYO1G;ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7687866091728	2	604.768257	1207.52196	1.2163	0.00073556	0.56434	0.00034129	1.7806	0.0010769	604.7686049988844	52.532	0.7757	54.505	53.985	54.76	1.9722					69	24	4	0	0	0	0.033102	4	21945	21898;21945;21996;22037		82.529	22.455	1	6977700			16468	4414	7720	7755	19407;19408;19409;19410	19408		74			-0.07349930736563692
KYMDINFDF	9	Unmodified	_KYMDINFDF_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;nc|ENSG00000136286|B0I1T2-3|MYO1G;MYO1G|p.N590Kfs*17|1|0.22|ENSG00000136286|chr7:44967617-44967618|-/C|frameshift_variant;nc|ENSG00000136286|B0I1T2-4|MYO1G;ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7728149294853	2	596.7708	1191.52705	3.1604	0.001886	-1.025	-0.00061168	2.1354	0.0012743	596.7706309472804	64.747	1.0859	66.154	65.833	66.919	1.4071					85	34	6	0	0	0	0.010585	5	27131	27087;27131;27170;27210;27256		106.94	24.411	1	64350000			16469	4414	7720	7756	19411;19412;19413;19414;19415	19412					-0.06105626873932124
KYMDINFDF	9	Unmodified	_KYMDINFDF_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;nc|ENSG00000136286|B0I1T2-3|MYO1G;MYO1G|p.N590Kfs*17|1|0.22|ENSG00000136286|chr7:44967617-44967618|-/C|frameshift_variant;nc|ENSG00000136286|B0I1T2-4|MYO1G;ENSG00000136286|ENST00000258787|MYO1G;nc|ENSG00000136286|B0I1T2-2|MYO1G;ENST00000483585.5_1_7:45011810-45018578:-|nuORF;ENST00000480503.5_1_7:45014700-45018578:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7721435427666	2	596.7708	1191.52705	2.5465	0.0015197	-0.71992	-0.00042963	1.8266	0.0010901	596.770788511141	64.258	0.91309	66.186	65.857	66.77	1.928					88	28	6	0	0	0	0.015029	6	26999	26874;26921;26960;26999;27038;27101		103.35	24.625	1	58516000			16470	4414	7720	7756	19416;19417;19418;19419;19420;19421	19419					-0.06105626873932124
KYMDVQFDF	9	Oxidation (M)	_KYM(Oxidation (M))DVQFDF_		KYM(1)DVQFDF		KYM(96)DVQFDF	0	0	1		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7697631716728	2	604.768257	1207.52196	2.0257	0.0012251	0.25026	0.00015135	2.2759	0.0013764	604.7683029830936	46.912	0.69888	48.295	47.964	48.663	1.3825					63	21	4	0	0	0	0.024001	3	19599	19599;19638;19676		96.111	24.189	1	8849900			16471	5026	7721	7757	19422;19423;19424	19422		87			-0.07349930736563692
KYMDVQFDF	9	Oxidation (M)	_KYM(Oxidation (M))DVQFDF_		KYM(1)DVQFDF		KYM(100)DVQFDF	0	0	1		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7689697146416	2	604.768257	1207.52196	1.6839	0.0010184	0.59347	0.00035891	2.2774	0.0013773	604.7686095550388	46.454	0.61498	48.424	48.126	48.741	1.9703					63	19	4	0	0	0	0.015029	3	19504	19413;19463;19504		103.35	24.625	1	9278900			16472	5026	7721	7757	19425;19426;19427	19427		87			-0.07349930736563692
KYMDVQFDF	9	Unmodified	_KYMDVQFDF_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7710449099541	2	596.7708	1191.52705	1.0353	0.00061783	-0.40195	-0.00023987	0.63334	0.00037796	596.7707463160558	58.475	1.1273	59.893	59.609	60.736	1.4181					102	36	5	0	0	0	0.0060384	6	24492	24443;24492;24531;24570;24617;24671		118.07	29.115	1	86153000			16473	5026	7721	7758	19428;19429;19430;19431;19432;19433	19429					-0.06105626873932124
KYMDVQFDF	9	Unmodified	_KYMDVQFDF_					0	0	0		nc|ENSG00000197879|O00159-2|MYO1C;nc|ENSG00000197879|O00159-3|MYO1C;ENSG00000197879|ENST00000648651|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	nc|ENSG00000197879|O00159-2|MYO1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7720825076103	2	596.7708	1191.52705	0.73876	0.00044087	-0.80521	-0.00048052	-0.066444	-3.9652E-05	596.7704903079608	57.919	0.85172	59.889	59.606	60.457	1.969					95	28	5	0	0	0	0.0069529	4	24387	24221;24259;24348;24387		114.65	28.212	1	58544000			16474	5026	7721	7758	19434;19435;19436;19437	19437					-0.06105626873932124
KYMEPSDDD	9	Unmodified	_KYMEPSDDD_					0	0	0			REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN	REV__nc|ENSG00000162614|Q0ZGT2-4|NEXN	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.6298095583916	2	550.216054	1098.41756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.775	1	97.866	97.366	98.366	0.090881								0	0	0	0.42693	1	40911	40911		0.52476	0.52476	1		+		16475	10650	7722	7759	19438	19438					-0.12771677283922145
KYMPNVKVAVF	11	Unmodified	_KYMPNVKVAVF_					0	0	0		ENST00000481456.1_1_6:31503008-31508408:-|nuORF;ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.3628417849541	2	648.362659	1294.71076	2	0.0012967	-2.4438	-0.0015844	-0.44379	-0.00028774	648.3626069148085	41.121	0.28306	42.446	42.273	42.556	1.3254					15	8	2	0	0	0	0.31168	1	17252	17252		31.268	21.885	1	802220			16476	5056	7723	7760	19439	19439					0.0751976662756988
KYMPNVKVAVF	11	Unmodified	_KYMPNVKVAVF_					0	0	0		ENST00000481456.1_1_6:31503008-31508408:-|nuORF;ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.3647338747978	2	648.362659	1294.71076	2.1028	0.0013634	-1.191	-0.00077221	0.91176	0.00059115	648.3622145601807	40.713	0.28395	42.605	42.452	42.736	1.8927					13	8	2	0	0	0	0.17708	2	17059	17059;17106		41.956	28.913	1	900760			16477	5056	7723	7760	19440;19441	19440					0.0751976662756988
KYMSLALQSFI	11	Unmodified	_KYMSLALQSFI_					0	0	0		tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.8522827029228	2	650.852124	1299.68969	2.5307	0.0016471	-0.762	-0.00049595	1.7687	0.0011511	650.8500919033249	64.269	0.47224	66.197	65.95	66.422	1.928					25	14	2	0	0	0	0.74096	1	26928	26928		17.113	0.96379	1	1364500			16478	16698	7724	7761	19442	19442					0.051837565280493436
KYMSLALQSFI	11	Unmodified	_KYMSLALQSFI_					0	0	0		tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	tr|A0A553SUL8|A0A553SUL8_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02575PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	650.852124	1299.68969	2.8274	0.0018402	0.33933	0.00022086	3.1667	0.0020611	650.8504762413281	64.721	0.43408	66.129	65.954	66.388	1.4071	-0.034095	0.00080403	NaN	17.113	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1803100			16479	16698	7724	7761							0.051837565280493436
KYMTAVVKL	9	Unmodified	_KYMTAVVKL_					0	0	0		ENSG00000051523|ENST00000261623|CYBA;ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENSG00000051523|ENST00000261623|CYBA	ENSG00000051523|ENST00000261623|CYBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8134033083916	2	526.81227	1051.60999	0.88471	0.00046607	0.83228	0.00043845	1.717	0.00090453	526.81274769603	29.598	0.30229	31.397	31.204	31.506	1.7987					21	9	3	0	0	0	0.034867	1	12392	12392		80.676	32.927	1	1664300			16480	704	7725	7762	19443	19443					0.08624734644718046
KYMTAVVKL	9	Unmodified	_KYMTAVVKL_					0	0	0		ENSG00000051523|ENST00000261623|CYBA;ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENSG00000051523|ENST00000261623|CYBA	ENSG00000051523|ENST00000261623|CYBA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	526.81227	1051.60999	0.86056	0.00045335	1.1657	0.00061408	2.0262	0.0010674	526.8125823145202	30.081	0.33963	31.363	31.193	31.532	1.2825	-0.016915	0.00017635	NaN	80.676	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2405000			16481	704	7725	7762							0.08624734644718046
KYNANFVTF	9	Unmodified	_KYNANFVTF_					0	0	0		ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF	ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2809326052666	2	552.279649	1102.54475	1.8029	0.00099569	-2.2931	-0.0012665	-0.49026	-0.00027076	552.2783461165141	43.635	0.54926	44.989	44.735	45.284	1.3536					51	17	4	0	0	0	0.029093	3	18273	18230;18273;18314		88.904	50.752	1	14222000			16482	4267	7726	7763	19444;19445;19446	19445					-0.0024254355678294814
KYNANFVTF	9	Unmodified	_KYNANFVTF_					0	0	0		ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A;ENST00000527157.1_1_11:66888787-66947744:+|nuORF	ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2781860232353	2	552.279649	1102.54475	1.8392	0.0010158	-2.8046	-0.0015489	-0.96539	-0.00053317	552.2784020603156	43.015	0.47923	44.936	44.694	45.173	1.9211					52	15	4	0	0	0	0.029093	3	18066	17965;18015;18066		88.904	40.558	1	12087000			16483	4267	7726	7763	19447;19448;19449	19449					-0.0024254355678294814
KYNDNFFGL	9	Unmodified	_KYNDNFFGL_					0	0	0		UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant;ENSG00000012963|ENST00000013070|UBR7	UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant	UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2690307497978	2	559.269281	1116.52401	1.418	0.00079303	-2.4174	-0.001352	-0.99937	-0.00055892	559.2678972794358	56.708	0.33656	58.123	57.816	58.153	1.4145					27	10	3	0	0	0	0.007852	2	23714	23714;23764		111.29	43.206	1	10398000			16484	580	7727	7764	19450;19451	19450					-0.029591339364287705
KYNDNFFGL	9	Unmodified	_KYNDNFFGL_					0	0	0		UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant;ENSG00000012963|ENST00000013070|UBR7	UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant	UBR7|p.C189Wfs*3|1|0.45|ENSG00000012963|chr14:93215244-93215274|TTGTTCTTTTTTGTGGGCTTATGCTGCACAA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2676269412041	2	559.269281	1116.52401	1.1489	0.00064253	-2.0562	-0.00115	-0.90731	-0.00050743	559.268097784833	56.164	0.33804	58.133	57.811	58.149	1.9684					26	10	3	0	0	0	0.029061	2	23533	23487;23533		88.954	30.275	1	11347000			16485	580	7727	7764	19452;19453	19453					-0.029591339364287705
KYNDTFWKEF	10	Unmodified	_KYNDTFWKEF_					0	0	0		ENST00000551983.1_1_12:104335630-104337190:+|nuORF;nc|ENSG00000259706|Q58FF3|HSP90B2P;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;HSP90B1|p.I687Vfs*9|1|0.07|ENSG00000166598|chr12:103946648-103946649|-/GTGCTCCAGGTACTTGGGACTC|frameshift_variant;ENSG00000166598|ENST00000299767|HSP90B1	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	689.3282348513603	2	689.327328	1376.6401	1.9223	0.0013251	-0.24815	-0.00017105	1.6741	0.001154	689.3269104422552	47.252	0.35049	48.635	48.442	48.792	1.3825					26	10	3	0	0	0	0.059752	1	19773	19773		74.772	42.734	1	1739800			16486	3914	7728	7765	19454	19454					-0.03315235156401286
KYNDTFWKEF	10	Unmodified	_KYNDTFWKEF_					0	0	0		ENST00000551983.1_1_12:104335630-104337190:+|nuORF;nc|ENSG00000259706|Q58FF3|HSP90B2P;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;HSP90B1|p.I687Vfs*9|1|0.07|ENSG00000166598|chr12:103946648-103946649|-/GTGCTCCAGGTACTTGGGACTC|frameshift_variant;ENSG00000166598|ENST00000299767|HSP90B1	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1729003787041	3	459.88731	1376.6401	2.464	0.0011331	-1.1054	-0.00050834	1.3586	0.00062481	459.8867771919027	47.182	0.38234	48.564	48.41	48.792	1.3825					19	11	2	0	0	0	0.12551	1	19768	19768		1.5923	0.89462	1	1155400			16487	3914	7728	7765	19455	19455					-0.03315235156401286
KYNDTFWKEF	10	Unmodified	_KYNDTFWKEF_					0	0	0		ENST00000551983.1_1_12:104335630-104337190:+|nuORF;nc|ENSG00000259706|Q58FF3|HSP90B2P;ENST00000548462.5_1_12:104324233-104336580:+|nuORF;HSP90B1|p.I687Vfs*9|1|0.07|ENSG00000166598|chr12:103946648-103946649|-/GTGCTCCAGGTACTTGGGACTC|frameshift_variant;ENSG00000166598|ENST00000299767|HSP90B1	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	ENST00000551983.1_1_12:104335630-104337190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	689.3255493044853	2	689.327328	1376.6401	1.3616	0.00093861	-0.31082	-0.00021426	1.0508	0.00072435	689.3265728953916	46.704	0.32937	48.674	48.503	48.832	1.9703					25	10	3	0	0	0	0.12803	2	19592	19542;19592		59.013	37.423	1	1606000			16488	3914	7728	7765	19456;19457	19457					-0.03315235156401286
KYNIMLVRL	9	Unmodified	_KYNIMLVRL_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3458740115166	2	575.344269	1148.67399	1.854	0.0010667	-1.8908	-0.0010878	-0.036826	-2.1188E-05	575.3425577550094	48.86	0.49218	50.837	50.7	51.192	1.9772					29	15	3	0	0	0	0.057024	1	20465	20465		65.235	43.488	1	1989400			16489	3442	7729	7766	19458	19458					0.105595148016846
KYNIMLVRL	9	Unmodified	_KYNIMLVRL_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	575.344269	1148.67399	1.9642	0.0011301	-1.6159	-0.00092967	0.34836	0.00020043	575.3424595414165	49.446	0.46148	50.838	50.673	51.135	1.3911	0.00015984	8.5942E-05	NaN	65.235	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2561200			16490	3442	7729	7766							0.105595148016846
KYPDIISRI	9	Unmodified	_KYPDIISRI_					0	0	0		LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1;ENSG00000105486|ENST00000263274|LIG1	LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8262206912041	2	552.824224	1103.63389	2.1219	0.001173	0.74587	0.00041233	2.8677	0.0015854	552.8252137365319	39.113	0.41099	40.409	40.29	40.701	1.2961					20	12	2	0	0	0	0.75101	1	16427	16427		5.2969	0.54088	1	595690			16491	1520	7730	7767	19459	19459					0.08622291402753035
KYPDIISRI	9	Unmodified	_KYPDIISRI_					0	0	0		LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant;nc|ENSG00000105486|P18858-2|LIG1;nc|ENSG00000105486|P18858-3|LIG1;ENSG00000105486|ENST00000263274|LIG1	LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.824224	1103.63389	1.1326	0.00062612	1.2594	0.00069623	2.392	0.0013224	552.8251247178499	38.662	0.25567	40.499	40.367	40.622	1.8366	0.044947	0.00037822	NaN	5.2969	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	403340			16492	1520	7730	7767							0.08622291402753035
KYPENFFLL	9	Unmodified	_KYPENFFLL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-3|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.8152343630791	2	585.813325	1169.6121	2.0579	0.0012056	-0.19603	-0.00011484	1.8619	0.0010907	585.813618455083	71.735	2.3511	73.076	72.42	74.771	1.3415					313	75	5	0	0	0	0.033504	20	30303	29953;29991;30030;30069;30108;30147;30186;30225;30264;30303;30342;30395;30446;30485;30524;30563;30602;30644;30698;30754		81.89	20.533	1	438720000			16493	5225;4242;4785	7731	7768	19460;19461;19462;19463;19464;19465;19466;19467;19468;19469;19470;19471;19472;19473;19474;19475;19476;19477;19478;19479	19469					0.03407486654191416
KYPENFFLL	9	Unmodified	_KYPENFFLL_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA;ENST00000526510.5_1_11:67166008-67168740:-|nuORF;nc|ENSG00000172531|P62136-2|PPP1CA;ENST00000532446.5_1_11:67166008-67168991:-|nuORF;nc|ENSG00000172531|P62136-3|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion;nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC	ENSG00000172531|ENST00000376745|PPP1CA;ENSG00000213639|ENST00000395366|PPP1CB;nc|ENSG00000186298|P36873-2|PPP1CC	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.8149902224541	2	585.813325	1169.6121	1.7176	0.0010062	-0.30489	-0.00017861	1.4127	0.00082756	585.8135181958169	71.32	2.8545	73.144	72.367	75.221	1.824					335	91	5	0	0	0	0.026836	20	29794	29755;29794;29833;29872;29911;29950;29989;30028;30067;30106;30145;30184;30224;30275;30314;30353;30393;30435;30503;30554		92.491	29.622	1	361360000			16494	5225;4242;4785	7731	7768	19480;19481;19482;19483;19484;19485;19486;19487;19488;19489;19490;19491;19492;19493;19494;19495;19496;19497;19498;19499	19481					0.03407486654191416
KYPGDGTHKI	10	Unmodified	_KYPGDGTHKI_					0	0	0			REV__ENSG00000249709|ENST00000339282|ZNF564	REV__ENSG00000249709|ENST00000339282|ZNF564	MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2976562380791	2	558.29583	1114.57711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.109	1	53.505	53.005	54.005	1.3966								0	0	0	0.66052	1	21816	21816		3.5965	1.019	1		+		16495	11947	7732	7769	19500	19500					0.024402438462402642
KYPIHVFIIK	10	Unmodified	_KYPIHVFIIK_					0	0	0			REV__ENST00000354755.5_1_11:86085825-86086272:+|nuORF	REV__ENST00000354755.5_1_11:86085825-86086272:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	629.3905517458916	2	629.389534	1256.76451	2.5277	0.0015909	1.4429	0.00090812	3.9705	0.002499	629.390124803067	89.708	0.77151	89.931	89.615	90.387	0.2236					34	23	2	0	0	0	0.89803	1	37615	37615		1.4819	0	1	455650	+		16496	12540	7733	7770	19501	19501					0.14640307121590013
KYPKIVKK	8	Unmodified	_KYPKIVKK_					0	0	0		nc|ENSG00000167216|Q8IYT4-2|KATNAL2;ENSG00000167216|ENST00000683218|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8092529177666	2	502.33677	1002.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.27	1	104.43	103.93	104.93	0.16055								0	0	0	1.0178	1	44130	44130		0.79363	0	1				16497	3958	7734	7771	19502	19502					0.1577639099599537
KYPKVWEGF	9	Unmodified	_KYPKVWEGF_					0	0	0		ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3056518435478	2	577.305667	1152.59678	2.2264	0.0012853	-0.78231	-0.00045163	1.4441	0.00083366	577.3057486822155	39.78	0.24232	41.09	40.965	41.207	1.3102					17	7	3	0	0	0	0.51189	1	16674	16674		14.838	4.0143	1	1030500			16498	2276;7531	7735	7772	19503	19503					0.026586198569930275
KYPKVWEGF	9	Unmodified	_KYPKVWEGF_					0	0	0		ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF;ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3057739138603	2	577.305667	1152.59678	1.4999	0.00086589	-1.1952	-0.00068999	0.30468	0.0001759	577.3060901640549	39.22	0.33878	41.057	40.913	41.252	1.8366					21	10	3	0	0	0	0.51189	1	16423	16423		14.838	4.0143	1	564990			16499	2276;7531	7735	7772	19504	19504					0.026586198569930275
KYPLLLKEL	9	Unmodified	_KYPLLLKEL_					0	0	0		nc|ENSG00000146426|Q8IVF5-3|TIAM2;nc|ENSG00000146426|Q8IVF5-4|TIAM2;TIAM2|p.L1515Yfs*5|1|0.15|ENSG00000146426|chr6:155256558-155256559|-/A|frameshift_variant;ENSG00000146426|ENST00000682666|TIAM2;nc|ENSG00000146426|Q8IVF5-5|TIAM2;nc|ENSG00000146426|Q8IVF5-2|TIAM2;PREX1|p.T970Vfs*46|1|0.08|ENSG00000124126|chr20:48650116-48650117|-/CATGGTGGTGATGCAGTGCTGGGTGTAC|frameshift_variant;PREX1|p.C968Wfs*56|1|0.22|ENSG00000124126|chr20:48650120-48650121|-/ACCAAGGGTCCCACTGGCTGGCCCGAAGCTGC|frameshift_variant;nc|ENSG00000124126|Q8TCU6-3|PREX1;ENSG00000124126|ENST00000371941|PREX1	nc|ENSG00000146426|Q8IVF5-3|TIAM2	nc|ENSG00000146426|Q8IVF5-3|TIAM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8550292849541	2	558.854993	1115.69543	2.3194	0.0012962	0.20866	0.00011661	2.5281	0.0014128	558.8551812616159	45.356	0.83315	46.721	46.18	47.013	1.3653					37	25	2	0	0	0	0.46566	1	19100	19100		17.113	0	1	727800			16500	3154	7736	7773	19505	19505					0.14221223102049407
KYPLLLQSI	9	Unmodified	_KYPLLLQSI_					0	0	0		ENST00000595897.5_1_19:42402462-42407822:+|nuORF;ENST00000600274.5_1_19:42396347-42410935:+|nuORF;nc|ENSG00000076928|Q92888-2|ARHGEF1;ENSG00000076928|ENST00000354532|ARHGEF1;nc|ENSG00000076928|Q92888-3|ARHGEF1;nc|ENSG00000076928|Q92888-4|ARHGEF1	ENST00000595897.5_1_19:42402462-42407822:+|nuORF	ENST00000595897.5_1_19:42402462-42407822:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8340942263603	2	537.831517	1073.64848	3.3959	0.0018264	0.61178	0.00032903	4.0077	0.0021555	537.8317739441476	60.459	1.0585	62.425	61.578	62.637	1.9653					45	33	2	0	0	0	0.11643	1	25346	25346		43.858	1.7637	1	892530			16501	951	7737	7774	19506	19506					0.11460363550895636
KYPLLLREL	9	Unmodified	_KYPLLLREL_					0	0	0		nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.8591186404228	2	572.858067	1143.70158	1.9613	0.0011235	0.10213	5.8507E-05	2.0634	0.001182	572.8578031006223	47.105	1.3219	48.488	47.437	48.759	1.3825					70	41	2	0	0	0	0.35546	4	19737	19399;19504;19684;19737		22.658	0	1	1033100			16502	3444	7738	7775	19507;19508;19509;19510	19510					0.13547741333559316
KYPLLLREL	9	Unmodified	_KYPLLLREL_					0	0	0		nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.8588744997978	2	572.858067	1143.70158	1.5886	0.00091003	0.80273	0.00045985	2.3913	0.0013699	572.8579500159734	46.36	1.3	48.33	47.471	48.771	1.9703					60	41	2	0	0	0	0.52273	1	19355	19355		14.405	0	1	827990			16503	3444	7738	7775	19511	19511					0.13547741333559316
KYPLNLYLL	9	Unmodified	_KYPLNLYLL_					0	0	0		ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8420287966728	2	568.839342	1135.66413	2.9471	0.0016764	-0.33667	-0.00019151	2.6104	0.0014849	568.8388014048255	70.922	0.83921	72.264	71.732	72.571	1.3415					67	26	3	0	0	0	0.076627	1	29687	29687		57.471	5.203	1	7533400			16504	3433	7739	7776	19512	19512					0.10172650067920586
KYPLNLYLL	9	Unmodified	_KYPLNLYLL_					0	0	0		ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8404418826103	2	568.839342	1135.66413	1.8435	0.0010487	-0.60292	-0.00034297	1.2406	0.00070569	568.8387880369804	70.347	0.81341	72.184	71.719	72.532	1.8378					71	25	4	0	0	0	0.042029	3	29536	29485;29536;29592		74.423	6.3421	1	7255400			16505	3433	7739	7776	19513;19514;19515	19514					0.10172650067920586
KYPNLLNQL	9	Unmodified	_KYPNLLNQL_					0	0	0		ENST00000528400.1_1_8:42939784-42940422:+|nuORF;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA;ENSG00000168522|ENST00000302279|FNTA	ENST00000528400.1_1_8:42939784-42940422:+|nuORF	ENST00000528400.1_1_8:42939784-42940422:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	551.8169433474541	2	551.816399	1101.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.3	1	52.694	52.194	53.194	1.3938								0	0	0	0.0475	1	21480	21480		54.774	20.671	1				16506	4038	7740	7777	19516	19516					0.07150004885693306
KYPNLLNQL	9	Unmodified	_KYPNLLNQL_					0	0	0		ENST00000528400.1_1_8:42939784-42940422:+|nuORF;ENST00000530657.1_1_11:85906626-85907241:+|nuORF;nc|ENSG00000168522|P49354-2|FNTA;ENSG00000168522|ENST00000302279|FNTA	ENST00000528400.1_1_8:42939784-42940422:+|nuORF	ENST00000528400.1_1_8:42939784-42940422:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	551.8185302615166	2	551.816399	1101.61824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.275	1	52.252	51.752	52.752	1.9772								0	0	0	0.029679	1	21060	21060		71.134	25.113	1				16507	4038	7740	7777	19517	19517					0.07150004885693306
KYPRSRKR	8	Unmodified	_KYPRSRKR_					0	0	0			REV__ENSG00000163930|ENST00000460680|BAP1	REV__ENSG00000163930|ENST00000460680|BAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.8345214724541	2	545.833249	1089.65194	2.3257	0.0012695	0.037486	2.0461E-05	2.3632	0.0012899	545.8332333239152	83.206	0.98624	83.476	83.029	84.016	0.27029					59	31	3	0	0	0	0.89178	2	34898	34898;34951		0.69038	0	1	1168900	+		16508	10705	7741	7778	19518;19519	19518					0.11070471168113727
KYPSPFFVF	9	Unmodified	_KYPSPFFVF_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;nc|ENSG00000135829|Q08211-2|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2988159060478	2	566.29731	1130.58007	3.3831	0.0019159	-1.0229	-0.00057926	2.3602	0.0013366	566.2972440105983	74.463	1.6566	75.781	75.154	76.811	1.318					167	53	5	0	0	0	0.026836	9	31060	31060;31109;31148;31187;31239;31278;31331;31388;31444		92.491	48.633	1	203670000			16509	2688	7742	7779	19520;19521;19522;19523;19524;19525;19526;19527;19528	19520					0.020001189710455947
KYPSPFFVF	9	Unmodified	_KYPSPFFVF_					0	0	0		ENSG00000135829|ENST00000367549|DHX9;nc|ENSG00000135829|Q08211-2|DHX9;ENST00000485081.5_1_1:182847108-182856566:+|nuORF	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2990600466728	2	566.29731	1130.58007	2.9809	0.0016881	-1.104	-0.00062521	1.8769	0.0010629	566.2972029386248	73.936	1.7983	75.732	75.006	76.805	1.7962					173	57	5	0	0	0	0.007852	10	31055	30798;30849;30899;30938;30977;31016;31055;31095;31152;31205		111.29	49.93	1	164210000			16510	2688	7742	7779	19529;19530;19531;19532;19533;19534;19535;19536;19537;19538	19535					0.020001189710455947
KYPVEWAKF	9	Unmodified	_KYPVEWAKF_					0	0	0		ENSG00000104427|ENST00000263849|ZC2HC1A	ENSG00000104427|ENST00000263849|ZC2HC1A	ENSG00000104427|ENST00000263849|ZC2HC1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3145019412041	2	584.313492	1166.61243	2.2866	0.0013361	-1.5786	-0.00092242	0.70798	0.00041368	584.3119726848382	40.62	0.56133	41.93	41.665	42.226	1.3102					29	17	2	0	0	0	0.33297	1	17108	17108		23.79	7.9426	1	1436600			16511	1463	7743	7780	19539	19539					0.035789063740367055
KYPVEWAKF	9	Unmodified	_KYPVEWAKF_					0	0	0		ENSG00000104427|ENST00000263849|ZC2HC1A	ENSG00000104427|ENST00000263849|ZC2HC1A	ENSG00000104427|ENST00000263849|ZC2HC1A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	584.313492	1166.61243	1.9656	0.0011485	-1.8494	-0.0010807	0.11619	6.7892E-05	584.3116033121356	40.417	0.68274	42.28	41.707	42.39	1.8624	0.17475	-0.0001546	NaN	23.79	35	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1324000			16512	1463	7743	7780							0.035789063740367055
KYQEVTNNLEF	11	Unmodified	_KYQEVTNNLEF_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.3426391482353	2	692.840799	1383.66705	1.0112	0.0007006	-0.32286	-0.00022369	0.68834	0.00047691	692.8405542865185	38.204	0.30161	39.492	39.341	39.643	1.2879					18	9	3	0	0	0	0.33499	1	16013	16013		29.437	17.942	1	789830			16513	2661	7744	7781	19540	19540					-0.009441713358683046
KYQEVTNNLEF	11	Unmodified	_KYQEVTNNLEF_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	693.3434936404228	2	692.840799	1383.66705	0.086025	5.9601E-05	0.077697	5.3832E-05	0.16372	0.00011343	692.8405818178448	37.594	0.2612	39.414	39.256	39.517	1.8202					11	8	2	0	0	0	0.31887	1	15778	15778		30.703	19.209	1	1088000			16514	2661	7744	7781	19541	19541					-0.009441713358683046
KYQIINEEF	9	Unmodified	_KYQIINEEF_					0	0	0		ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3;ENST00000486530.1_1_3:148847510-148871436:+|nuORF	ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3051635622978	2	592.303321	1182.59209	2.2949	0.0013593	0.31978	0.0001894	2.6147	0.0015487	592.3035882260084	41.377	0.44755	42.702	42.493	42.94	1.3254					40	13	4	0	0	0	0.0017491	3	17366	17319;17366;17421		131.27	69.91	1	6270300			16515	3722	7745	7782	19542;19543;19544	19543					0.008096909235518979
KYQIINEEF	9	Unmodified	_KYQIINEEF_					0	0	0		ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3;ENST00000486530.1_1_3:148847510-148871436:+|nuORF	ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3051635622978	2	592.303321	1182.59209	2.0704	0.0012263	0.68902	0.00040811	2.7595	0.0016344	592.3037858193587	41.002	0.41505	42.895	42.673	43.088	1.8927					36	12	4	0	0	0	0.0044745	2	17196	17150;17196		123.45	64.772	1	6416400			16516	3722	7745	7782	19545;19546	19546					0.008096909235518979
KYQKGFSLW	9	Unmodified	_KYQKGFSLW_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8119994997978	2	578.811116	1155.60768	1.4442	0.00083593	-0.66051	-0.00038231	0.78371	0.00045362	578.8108999340681	38.368	0.78252	39.664	39.35	40.132	1.2961					69	25	3	0	0	0	0.0022704	6	16091	15998;16046;16091;16144;16195;16242		129.77	37.281	1	4328700			16517	820	7746	7783	19547;19548;19549;19550;19551;19552	19549					0.03610022231282528
KYQKGFSLW	9	Unmodified	_KYQKGFSLW_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.8113281130791	2	578.811116	1155.60768	0.76651	0.00044366	0.21838	0.0001264	0.98489	0.00057006	578.8112083110791	37.682	0.82836	39.502	39.145	39.974	1.8202					66	27	3	0	0	0	0.00020031	7	15795	15705;15748;15795;15837;15892;15939;15995		142.08	38.331	1	4598900			16518	820	7746	7783	19553;19554;19555;19556;19557;19558;19559	19555					0.03610022231282528
KYRILLFFWSL	11	Unmodified	_KYRILLFFWSL_					0	0	0			REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	REV__nc|ENSG00000196376|Q5T1Q4-2|SLC35F1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9612609744072	3	495.958741	1484.85439	4.8226	0.0023918	0.71867	0.00035643	5.5413	0.0027483	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0395	1	37885	37885		0.08335	0	1	3813600	+		16519	11631	7747	7784	19560	19560					0.13135936730191133
KYRRALGFDII	11	Unmodified	_KYRRALGFDII_					0	0	0			REV__MYLK4|p.K259Sfs*2|1|0.06|ENSG00000145949|chr6:2679393-2679393|C/-|frameshift_variant	REV__MYLK4|p.K259Sfs*2|1|0.06|ENSG00000145949|chr6:2679393-2679393|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	676.3980590701103	2	676.395879	1350.7772	2.8566	0.0019322	0.72792	0.00049236	3.5845	0.0024245	676.3965669513517	107.3	0.13069	107.46	107.39	107.52	0.15795					15	6	4	0	0	0	1.0366	1	46073	46073		1.1933	0.735	1	103220000	+		16520	10132	7748	7785	19561	19561					0.11584718513859116
KYRYRYPK	8	Unmodified	_KYRYRYPK_					0	0	0		nc|ENSG00000114268|Q16877-3|PFKFB4;ENSG00000114268|ENST00000232375|PFKFB4;ENSG00000158571|ENST00000375006|PFKFB1;ENST00000417753.5_1_3:48557182-48594149:-|nuORF;nc|ENSG00000158571|P16118-2|PFKFB1	nc|ENSG00000114268|Q16877-3|PFKFB4	nc|ENSG00000114268|Q16877-3|PFKFB4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2839843630791	3	391.889097	1172.64546	0.44815	0.00017562	-0.67746	-0.00026549	-0.22931	-8.9866E-05	391.8888545420649	25.583	0.40022	27.299	27.152	27.552	1.7167					17	12	2	0	0	0	2.3239	1	10722	10722		0.40072	0	1	1030100			16521	1855	7749	7786	19562	19562					0.06604533216727759
KYSDITIMF	9	Oxidation (M)	_KYSDITIM(Oxidation (M))F_		KYSDITIM(1)F		KYSDITIM(50)F	0	0	1		ENSG00000130005|ENST00000252288|GAMT;nc|ENSG00000130005|Q14353-2|GAMT	ENSG00000130005|ENST00000252288|GAMT	ENSG00000130005|ENST00000252288|GAMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2827636599541	2	567.281	1132.54745	1.2021	0.00068193	-0.05485	-3.1115E-05	1.1473	0.00065081	567.2816408515853	50.89	0.48036	52.284	52.078	52.558	1.3938					25	15	2	0	0	0	0.099302	1	21284	21284		49.554	15.452	1	2258300			16522	2414	7750	7787	19563	19563		46			-0.013524562141356
KYSDITIMF	9	Oxidation (M)	_KYSDITIM(Oxidation (M))F_		KYSDITIM(1)F		KYSDITIM(54)F	0	0	1		ENSG00000130005|ENST00000252288|GAMT;nc|ENSG00000130005|Q14353-2|GAMT	ENSG00000130005|ENST00000252288|GAMT	ENSG00000130005|ENST00000252288|GAMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.2809936404228	2	567.281	1132.54745	1.3387	0.00075941	-1.0599	-0.00060128	0.27876	0.00015813	567.2809826576674	50.3	0.35691	52.277	52.128	52.485	1.9772					18	11	2	0	0	0	0.086433	1	21072	21072		53.833	19.73	1	2624200			16523	2414	7750	7787	19564	19564		46			-0.013524562141356
KYSDITIMF	9	Unmodified	_KYSDITIMF_					0	0	0		ENSG00000130005|ENST00000252288|GAMT;nc|ENSG00000130005|Q14353-2|GAMT	ENSG00000130005|ENST00000252288|GAMT	ENSG00000130005|ENST00000252288|GAMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2848998904228	2	559.283543	1116.55253	2.5257	0.0014126	-0.99502	-0.0005565	1.5307	0.00085607	559.2832091334009	59.859	0.72841	61.279	60.958	61.687	1.4196					49	23	3	0	0	0	0.033102	4	25079	25036;25079;25121;25179		82.529	53.448	1	11395000			16524	2414	7750	7788	19565;19566;19567;19568	19566					-0.0010815235150403169
KYSDITIMF	9	Unmodified	_KYSDITIMF_					0	0	0		ENSG00000130005|ENST00000252288|GAMT;nc|ENSG00000130005|Q14353-2|GAMT	ENSG00000130005|ENST00000252288|GAMT	ENSG00000130005|ENST00000252288|GAMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2854492068291	2	559.283543	1116.55253	2.6393	0.0014761	-0.50393	-0.00028184	2.1354	0.0011943	559.2831115341431	59.36	0.60321	61.329	61.037	61.64	1.969					35	19	2	0	0	0	0.053939	3	24844	24844;24894;24948		66.457	34.151	1	11835000			16525	2414	7750	7788	19569;19570;19571	19569					-0.0010815235150403169
KYSLWRYPQN	10	Unmodified	_KYSLWRYPQN_					0	0	0			REV__nc|ENSG00000197142|Q9ULC5-4|ACSL5	REV__nc|ENSG00000197142|Q9ULC5-4|ACSL5	MSMS	GG20161007_CRH_Patient100_W632_02	4	678.1133300662041	2	677.848761	1353.68297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.526	1	96.833	96.333	97.333	0.3062								0	0	0	0.6607	1	40605	40605		3.2813	0	1		+		16526	11661	7751	7789	19572	19572					0.02027579691707615
KYSPFVVSF	9	Unmodified	_KYSPFVVSF_					0	0	0		ENSG00000086544|ENST00000263370|ITPKC	ENSG00000086544|ENST00000263370|ITPKC	ENSG00000086544|ENST00000263370|ITPKC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2878295779228	2	537.286943	1072.55933	2.6124	0.0014036	0.41686	0.00022397	3.0292	0.0016276	537.2873067134786	59.216	0.4588	60.635	60.436	60.895	1.4196					42	14	4	0	0	0	0.036104	3	24794	24794;24844;24896		79.596	20.917	1	17233000			16527	1073	7752	7790	19573;19574;19575	19573					0.0259552859138239
KYSTKKRQR	9	Unmodified	_KYSTKKRQR_					0	0	0			REV__nc|ENSG00000158691|O43309-2|ZSCAN12	REV__nc|ENSG00000158691|O43309-2|ZSCAN12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8574096560478	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.85019	1	32424	32424		0.52476	0.52476	1	11246000	+		16528	14471	7753	7791	19576	19576					0.11018705648439209
KYTKIFNDF	9	Unmodified	_KYTKIFNDF_					0	0	0		nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3093139529228	2	588.308406	1174.60226	0.39672	0.0002334	0.3684	0.00021673	0.76512	0.00045013	588.3086217327755	34.771	0.26303	36.046	35.922	36.185	1.2746					36	25	2	0	0	0	8.5553E-11	2	14575	14575;14617		208.35	119.4	1	11755000			16529	597	7754	7792	19577;19578	19577					0.02194298648782933
KYTKIFNDF	9	Unmodified	_KYTKIFNDF_					0	0	0		nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	MSMS	GG20161007_CRH_Patient100_W632_01	3	392.5414916872978	3	392.541363	1174.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.778	1	36.053	35.553	36.553	1.2746								0	0	0	0.05032	1	14598	14598		55.235	19.622	1				16530	597	7754	7792	19579	19579					0.02194298648782933
KYTKIFNDF	9	Unmodified	_KYTKIFNDF_					0	0	0		nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	MSMS	GG20161007_CRH_Patient100_W632_01	3	392.5421630740166	3	392.541363	1174.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.887	1	36.162	35.662	36.662	1.2746								0	0	0	0.091705	1	14644	14644		40.239	10.802	1				16531	597	7754	7792	19580	19580					0.02194298648782933
KYTKIFNDF	9	Unmodified	_KYTKIFNDF_					0	0	0		nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3098022341728	2	588.308406	1174.60226	0.8011	0.00047129	0.43148	0.00025384	1.2326	0.00072513	588.3085412474063	34.258	0.15486	36.081	36.035	36.189	1.8227					22	16	2	0	0	0	2.1056E-07	1	14384	14384		195.04	116.31	1	12378000			16532	597	7754	7792	19581	19581					0.02194298648782933
KYTKIFNDF	9	Unmodified	_KYTKIFNDF_					0	0	0		nc|ENSG00000015171|Q15326-4|ZMYND11;nc|ENSG00000015171|Q15326-5|ZMYND11;nc|ENSG00000015171|Q15326-2|ZMYND11;nc|ENSG00000015171|Q15326-6|ZMYND11;nc|ENSG00000015171|Q15326-3|ZMYND11;ENSG00000015171|ENST00000381604|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	nc|ENSG00000015171|Q15326-4|ZMYND11	MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3093749880791	2	588.308406	1174.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.185	1	36.008	35.508	36.508	1.8227								0	0	0	9.215400000000001E-62	1	14335	14335		205.91	120.27	1				16533	597	7754	7792	19582	19582					0.02194298648782933
KYVKIFDNF	9	Unmodified	_KYVKIFDNF_					0	0	0		nc|ENSG00000005801|O14628-4|ZNF195;nc|ENSG00000005801|O14628-7|ZNF195;nc|ENSG00000005801|O14628-5|ZNF195;nc|ENSG00000005801|O14628-6|ZNF195;ENSG00000005801|ENST00000399602|ZNF195	nc|ENSG00000005801|O14628-4|ZNF195	nc|ENSG00000005801|O14628-4|ZNF195	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	586.7932617068291	2	587.318774	1172.623	2.323	0.0013644	4.1516	0.0024383	6.4746	0.0038027	587.3227751765983	41.231	0.31675	42.557	42.43	42.746	1.3254					13	9	2	0	0	0	0.11157	1	17282	17282		18.146	6.5061	1	745750			16534	492	7755	7793	19583	19583					0.043588890284581794
KYVKVFDKF	9	Unmodified	_KYVKVFDKF_					0	0	0		nc|ENSG00000196247|Q9UII5|ZNF107;ENSG00000196247|ENST00000620827|ZNF107	nc|ENSG00000196247|Q9UII5|ZNF107	nc|ENSG00000196247|Q9UII5|ZNF107	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2846557497978	3	391.893737	1172.65938	1.4149	0.00055449	-1.4235	-0.00055785	-0.0085696	-3.3584E-06	392.22749496243523	49.406	0.71272	50.798	50.516	51.229	1.3911					28	22	2	0	0	0	0.11901	1	20677	20677		1.0715	0	1	648600			16535	4928	7756	7794	19584	19584					0.07995765925170417
KYVKVFYKF	9	Unmodified	_KYVKVFYKF_					0	0	0		nc|ENSG00000197134|Q9Y2Q1-4|ZNF257;nc|ENSG00000197134|Q9Y2Q1-3|ZNF257;nc|ENSG00000197134|Q9Y2Q1-2|ZNF257;ENSG00000197134|ENST00000594947|ZNF257	nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3588744997978	2	611.35516	1220.69577	2.3974	0.0014657	3.3474	0.0020465	5.7449	0.0035122	611.3570635581289	76.22	1.2889	77.514	76.787	78.076	1.2938					79	41	2	0	0	0	0.77526	1	31874	31874		4.3292	1.0479	1	2720900			16536	4982	7757	7795	19585	19585					0.09424642821863927
KYVPAIAHL	9	Unmodified	_KYVPAIAHL_					0	0	0		CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant;ENSG00000106066|ENST00000265394|CPVL	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3041869997978	2	506.302927	1010.5913	1.157	0.00058578	1.2817	0.00064891	2.4386	0.0012347	506.3036647574534	29.563	0.2136	30.845	30.705	30.918	1.2825					12	6	2	0	0	0	0.078975	1	12385	12385		56.541	38.406	1	694320			16537	372	7758	7796	19586	19586					0.08642941065158993
KYVPAIAHL	9	Unmodified	_KYVPAIAHL_					0	0	0		CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant;ENSG00000106066|ENST00000265394|CPVL	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	CPVL|p.V418Ffs*24|1|0.38|ENSG00000106066|chr7:29030646-29030646|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8058959841728	2	506.302927	1010.5913	0.78005	0.00039494	2.7427	0.0013886	3.5227	0.0017836	506.3050125501176	29.008	0.24001	30.807	30.689	30.929	1.7987					13	7	2	0	0	0	0.22519	1	12146	12146		30.225	12.09	1	547760			16538	372	7758	7796	19587	19587					0.08642941065158993
KYVRHRRHL	9	Unmodified	_KYVRHRRHL_					0	0	0			REV__ENST00000461182.1_1_1:151734815-151735610:-|nuORF	REV__ENST00000461182.1_1_1:151734815-151735610:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5907775759697	3	422.254773	1263.74249	4.0885	0.0017264	-2.0581	-0.00086903	2.0305	0.00085738	422.2538440758981	91.481	1.0254	92.463	92.039	93.064	0.98157					55	32	3	0	0	0	0.81521	1	38541	38541		2.7352	1.4056	1	1190300	+		16539	10213	7759	7797	19588	19588					0.12116940216401417
KYVSGEFRF	9	Unmodified	_KYVSGEFRF_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.1982910037041	3	378.197708	1131.57129	-0.090568	-3.4252E-05	0.83338	0.00031518	0.74281	0.00028093	378.19758253081176	30.968	0.34765	32.25	32.027	32.375	1.2817					18	10	2	0	0	0	0.15456	2	12955	12955;13009		29.437	20.685	1	996090			16540	2243	7760	7798	19589;19590	19589					0.01077145334556917
KYVSGEFRF	9	Unmodified	_KYVSGEFRF_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7950927615166	2	566.792924	1131.57129	0.795	0.0004506	1.828	0.0010361	2.623	0.0014867	566.7938563486928	30.922	0.38063	32.204	32.059	32.439	1.2825					15	11	2	0	0	0	0.33297	1	12980	12980		23.79	11.549	1	512650			16541	2243	7760	7798	19591	19591					0.01077145334556917
KYVSGEFRF	9	Unmodified	_KYVSGEFRF_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.1964904665947	3	378.197708	1131.57129	0.55205	0.00020878	-0.63195	-0.000239	-0.079899	-3.0218E-05	378.19669792750966	30.324	0.28002	32.139	32.013	32.294	1.8151					17	8	3	0	0	0	0.15456	1	12714	12714		29.437	17.21	1	744190			16542	2243	7760	7798	19592	19592					0.01077145334556917
KYVSGEFRF	9	Unmodified	_KYVSGEFRF_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.7924682497978	2	566.792924	1131.57129	0.8466	0.00047984	1.3584	0.0007699	2.2049	0.0012497	566.7934220333851	30.358	0.31199	32.173	32.013	32.325	1.8151					14	9	2	0	0	0	0.42097	1	12716	12716		19.362	7.1213	1	495410			16543	2243	7760	7798	19593	19593					0.01077145334556917
KYVSSVLSF	9	Unmodified	_KYVSSVLSF_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.7936279177666	2	515.2844	1028.55425	2.1905	0.0011287	2.236	0.0011522	4.4265	0.0022809	515.285860621781	46.747	0.56998	48.129	47.84	48.41	1.3825					30	17	2	0	0	0	0.063532	1	19556	19556		43.772	13.136	1	3234500			16544	5095	7761	7799	19594	19594					0.04111224728740126
KYVSSVLSF	9	Unmodified	_KYVSSVLSF_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2907592654228	2	515.2844	1028.55425	1.7743	0.00091425	1.9158	0.00098716	3.69	0.0019014	515.2859219603735	46.306	0.49947	48.276	48.003	48.503	1.9703					32	15	3	0	0	0	0.070055	1	19368	19368		60.074	22.1	1	3667600			16545	5095	7761	7799	19595	19595					0.04111224728740126
KYWQKLEHENF	11	Unmodified	_KYWQKLEHENF_					0	0	0			REV__ENSG00000163032|ENST00000295156|VSNL1	REV__ENSG00000163032|ENST00000295156|VSNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	761.3782836794853	2	761.377883	1520.74121	1.8765	0.0014287	0.29044	0.00022113	2.1669	0.0016498	761.8794882904161	69.735	0.50199	71.088	70.864	71.366	1.3536					36	15	3	0	0	0	0.94496	1	29261	29261		7.1017	0	1	2035800	+		16546	10670	7762	7800	19596	19596					0.0016721654635603045
KYWQKLEHENF	11	Unmodified	_KYWQKLEHENF_					0	0	0			REV__ENSG00000163032|ENST00000295156|VSNL1	REV__ENSG00000163032|ENST00000295156|VSNL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	761.377883	1520.74121	1.8765	0.0014287	0.29044	0.00022113	2.1669	0.0016498	761.8794882904161	69.735	0.50199	71.088	70.864	71.366	1.3536	-0.0016959	-0.00091787	NaN	7.1017	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2035800	+		16547	10670	7762	7800							0.0016721654635603045
KYWQKLEHENF	11	Unmodified	_KYWQKLEHENF_					0	0	0			REV__ENSG00000163032|ENST00000295156|VSNL1	REV__ENSG00000163032|ENST00000295156|VSNL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	761.377883	1520.74121	1.1384	0.00086679	1.4677	0.0011175	2.6061	0.0019843	761.3795435541399	69.239	0.52793	71.092	70.828	71.356	1.853	0.0016959	0.00087479	NaN	7.1017	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1717900	+		16548	10670	7762	7800							0.0016721654635603045
LAAAAAAWCFL	11	Unmodified	_LAAAAAAWCFL_					0	0	0		ENSG00000152377|ENST00000394945|SPOCK1;SPOCK1|p.I225Mfs*42|1|0.04|ENSG00000152377|chr5:136992515-136992516|-/GAAAAGACTGTCTTGTCCCCTTC|frameshift_variant	ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2886840701103	2	554.28642	1106.55829	0.9444	0.00052347	2.7565	0.0015279	3.7009	0.0020513	554.2877943884265	21.677	0.1797	22.854	22.75	22.93	1.177					8	5	2	0	0	0	0.57967	1	9065	9065		21.747	3.6117	1	466200			16549	3323	7763	7801	19597	19597					0.009269909508020646
LAAAAAAWCFL	11	Unmodified	_LAAAAAAWCFL_					0	0	0		ENSG00000152377|ENST00000394945|SPOCK1;SPOCK1|p.I225Mfs*42|1|0.04|ENSG00000152377|chr5:136992515-136992516|-/GAAAAGACTGTCTTGTCCCCTTC|frameshift_variant	ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2869140505791	2	554.28642	1106.55829	0.38728	0.00021467	1.5311	0.00084866	1.9184	0.0010633	554.287287171828	21.321	0.17707	22.895	22.772	22.949	1.5748					9	5	2	0	0	0	0.57967	1	8902	8902		21.747	3.6117	1	398090			16550	3323	7763	7801	19598	19598					0.009269909508020646
LAAAAGKQ	8	Unmodified	_LAAAAGKQ_					0	0	0		ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2174255251884	2	365.216321	728.418088	2.0554	0.00075066	-0.4893	-0.0001787	1.5661	0.00057196	365.2160125076195	107.8	0.18123	107.96	107.84	108.03	0.15781					15	9	2	0	0	0	0.89176	1	46452	46452		0.79363	0	1	115370000			16551	3462	7764	7802	19599	19599					0.0430157500874202
LAAAAGKQ	8	Unmodified	_LAAAAGKQ_					0	0	0		ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2164489626884	2	365.216321	728.418088	2.8831	0.001053	-1.6277	-0.00059448	1.2554	0.00045848	365.21544569525236	107.78	0.14801	107.94	107.86	108.01	0.15796					15	7	3	0	0	0	0.89176	1	46385	46385		0.79363	0	1	68560000			16552	3462	7764	7802	19600	19600					0.0430157500874202
LAAAAGKQ	8	Unmodified	_LAAAAGKQ_					0	0	0		ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	365.216321	728.418088	-1.3045	-0.00047642	-0.66624	-0.00024332	-1.9707	-0.00071974	365.21535567519106	107.87	0.12386	107.87	107.79	107.91	0	-0.041031	0.00020883	NaN	0.79363	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18499000			16553	3462	7764	7802							0.0430157500874202
LAAAAGKQ	8	Unmodified	_LAAAAGKQ_					0	0	0		ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	ENSG00000157005|ENST00000287641|SST	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	365.216321	728.418088	2.5361	0.00092623	-1.4832	-0.0005417	1.0529	0.00038452	365.2154495360268	107.84	0.12604	107.89	107.82	107.95	0.052452	-0.025902	-0.00038794	NaN	0.79363	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18797000			16554	3462	7764	7802							0.0430157500874202
LAAAEKLNKPI	11	Unmodified	_LAAAEKLNKPI_					0	0	0		tr|A0A553SLZ8|A0A553SLZ8_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21575PE=4SV=1	tr|A0A553SLZ8|A0A553SLZ8_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21575PE=4SV=1	tr|A0A553SLZ8|A0A553SLZ8_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_21575PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3569824099541	2	584.358431	1166.70231	1.7917	0.001047	-2.8624	-0.0016727	-1.0707	-0.00062568	584.3565666148345	72.795	1.6696	72.795	71.764	73.433	0					67	52	2	0	0	0	1.0084	2	30302	30157;30302		3.2813	1.6287	1	1868000			16555	16362	7765	7803	19601;19602	19602					0.1256253598260173
LAAAGRRGP	9	Unmodified	_LAAAGRRGP_					0	0	0			REV__ENSG00000170275|ENST00000320954|CRTAP	REV__ENSG00000170275|ENST00000320954|CRTAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7601501345634	2	434.759218	867.503883	2.2008	0.00095683	0.32105	0.00013958	2.5219	0.0010964	434.75930017600865	67.942	0.70199	69.32	69.035	69.737	1.3778					60	22	4	0	0	0	0.77526	2	28460	28460;28548		4.3292	0	1	10816000	+		16556	10978	7766	7804	19603;19604	19603					0.06483159914273529
LAAAGRRGP	9	Unmodified	_LAAAGRRGP_					0	0	0			REV__ENSG00000170275|ENST00000320954|CRTAP	REV__ENSG00000170275|ENST00000320954|CRTAP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	434.759218	867.503883	2.2008	0.00095683	0.32105	0.00013958	2.5219	0.0010964	434.75930017600865	67.942	0.70199	69.32	69.035	69.737	1.3778	0.062718	4.2055E-05	NaN	4.3292	60	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10816000	+		16557	10978	7766	7804							0.06483159914273529
LAAAILFSTL	10	Unmodified	_LAAAILFSTL_					0	0	0		IGSF9B|p.L1050Afs*16|1|0.11|ENSG00000080854|chr11:133920577-133920578|-/C|frameshift_variant;nc|ENSG00000080854|Q9UPX0|IGSF9B;ENSG00000080854|ENST00000533871|IGSF9B	IGSF9B|p.L1050Afs*16|1|0.11|ENSG00000080854|chr11:133920577-133920578|-/C|frameshift_variant	IGSF9B|p.L1050Afs*16|1|0.11|ENSG00000080854|chr11:133920577-133920578|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8058654665947	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.62746	1	28278	28278		21.747	0	1	98417000			16558	1012	7767	7805	19605	19605					0.09772388142516775
LAAAKQGSKQ	10	Unmodified	_LAAAKQGSKQ_					0	0	0			REV__ENST00000373068.6_3_9:130870893-130871202:+|nuORF	REV__ENST00000373068.6_3_9:130870893-130871202:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2910644412041	2	501.290548	1000.56654	2.3769	0.0011915	-0.13659	-6.8474E-05	2.2403	0.001123	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.88022	1	28123	28123		3.5965	0.31518	1	2426300	+		16559	12688	7768	7806	19606	19606					0.06628261191804086
LAAAKTKH	8	Unmodified	_LAAAKTKH_					0	0	0		tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2621642947197	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.09	1	101.15	100.65	101.65	0.067009								0	0	0	1.0178	1	42319	42319		0.6015	0	1				16560	16037	7769	7807	19607	19607					0.07677525825511111
LAAAKTKH	8	Unmodified	_LAAAKTKH_					0	0	0		tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	tr|A0A553SF34|A0A553SF34_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_08150PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2610656619072	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.48	1	101.54	101.04	102.04	0.067009								0	0	0	1.0178	1	42488	42488		2.3027	0	1				16561	16037	7769	7807	19608	19608					0.07677525825511111
LAAAKWRQ	8	Unmodified	_LAAAKWRQ_					0	0	0			REV__ENSG00000171119|ENST00000303212|NRTN	REV__ENSG00000171119|ENST00000303212|NRTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2794372439384	2	472.277244	942.539935	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.757	1	84.027	83.527	84.527	0.27029								0	0	0	1.0178	1	35030	35030		0.79363	0	1		+		16562	11010	7770	7808	19609	19609					0.06636617091123753
LAAALLLR	8	Unmodified	_LAAALLLR_					0	0	0		ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.7881957888603	2	420.786913	839.559273	3.0696	0.0012917	-0.2561	-0.00010776	2.8135	0.0011839	420.7867825532119	106.18	0.18176	106.34	106.25	106.43	0.15781					26	9	3	0	0	0	0.89176	1	45395	45395		0.79363	0	1	349620000			16563	4837	7771	7809	19610	19610					0.133075733820192
LAAALLLR	8	Unmodified	_LAAALLLR_					0	0	0		ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.7881957888603	2	420.786913	839.559273	3.0702	0.0012919	-2.7834	-0.0011712	0.2868	0.00012068	420.7869717641197	108.34	0.52843	108.49	108.36	108.89	0.15781					57	27	3	0	0	0	0.89176	1	46804	46804		0.79363	0	1	48276000			16564	4837	7771	7809	19611	19611					0.133075733820192
LAAALLLR	8	Unmodified	_LAAALLLR_					0	0	0		ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	420.7877685427666	2	420.786913	839.559273	3.2318	0.0013599	-0.49852	-0.00020977	2.7333	0.0011501	420.78656445216603	106.16	0.40619	106.32	106.22	106.63	0.16174					45	20	4	0	0	0	0.89008	1	45317	45317		2.5775	0	1	271580000			16565	4837	7771	7809	19612	19612					0.133075733820192
LAAALLLR	8	Unmodified	_LAAALLLR_					0	0	0		ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	420.786913	839.559273	0.28417	0.00011958	-0.059476	-2.5027E-05	0.2247	9.4549E-05	420.7883972137423	108.36	0.13519	108.36	108.28	108.42	0	-0.068264	0.0023719	NaN	0.79363	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6227300			16566	4837	7771	7809							0.133075733820192
LAAALLLR	8	Unmodified	_LAAALLLR_					0	0	0		ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	420.786913	839.559273	3.2278	0.0013582	-4.7571	-0.0020017	-1.5293	-0.0006435	420.78679254487076	108.28	0.27351	108.43	108.37	108.64	0.15795	0.0041972	-0.0015815	NaN	0.79363	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5521500			16567	4837	7771	7809							0.133075733820192
LAAALLRHV	9	Unmodified	_LAAALLRHV_					0	0	0			REV__ENST00000433430.5_1_2:233196570-233200992:+|nuORF	REV__ENST00000433430.5_1_2:233196570-233200992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3083984255791	2	482.308544	962.602535	2.2116	0.0010667	-2.0904	-0.0010082	0.12119	5.8451E-05	482.30756438236	70.835	0.44267	71.158	70.893	71.336	0.32359					22	13	2	0	0	0	0.82604	1	29657	29657		2.3027	0.24298	1	1230000	+		16568	10252	7772	7810	19613	19613					0.11973763159312512
LAAALVWI	8	Unmodified	_LAAALVWI_					0	0	0			REV__nc|ENSG00000173585|P51686-2|CCR9	REV__nc|ENSG00000173585|P51686-2|CCR9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	428.2690612673759	2	428.768189	855.521825	2.6937	0.001155	3.7979	0.0016284	6.4916	0.0027834	428.7694660404871	72.718	0.1913	74.528	74.48	74.671	1.8101					7	5	2	0	0	0	2.3239	1	30533	30533		11.114	0	1	538310	+		16569	11106	7773	7811	19614	19614					0.0882848211641658
LAAARPRN	8	Unmodified	_LAAARPRN_					0	0	0			REV__nc|nan|Q2M2W7-2|C17orf58	REV__nc|nan|Q2M2W7-2|C17orf58	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7600280642509	2	434.759218	867.503883	2.2008	0.00095683	0.32105	0.00013958	2.5219	0.0010964	434.75930017600865	67.942	0.70199	69.32	69.035	69.737	1.3778					60	22	4	0	0	0	0.89008	1	28510	28510		2.5775	0	1	10816000	+		16570	11507	7774	7812	19615	19615					0.06483159914273529
LAAARPRN	8	Unmodified	_LAAARPRN_					0	0	0			REV__nc|nan|Q2M2W7-2|C17orf58	REV__nc|nan|Q2M2W7-2|C17orf58	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7602722048759	2	434.759218	867.503883	1.7353	0.00075444	0.13578	5.9031E-05	1.8711	0.00081347	434.7593541692662	67.545	0.58881	69.415	69.147	69.736	1.87					54	18	4	0	0	0	0.89008	1	28304	28304		2.5775	2.5775	1	9838000	+		16571	11507	7774	7812	19616	19616					0.06483159914273529
LAAARQLLY	9	Unmodified	_LAAARQLLY_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8057433962822	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.594	1	68.594	68.094	69.094	0								0	0	0	0.42693	1	28565	28565		5.2307	0.47466	1		+		16572	8523	7775	7813	19617	19617					0.08902039576832976
LAAARQLLY	9	Unmodified	_LAAARQLLY_					0	0	0			REV__nc|ENSG00000009413|O60673-2|REV3L	REV__nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8042175173759	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	0.82604	1	29182	29182		2.3027	0	1	1556700	+		16573	8523	7775	7813	19618	19618					0.08902039576832976
LAAAVNRH	8	Unmodified	_LAAAVNRH_					0	0	0			REV__ENST00000436411.5_1_7:107204485-107204728:+|nuORF	REV__ENST00000436411.5_1_7:107204485-107204728:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.2469360232353	2	426.245944	850.477334	1.7977	0.00076628	1.2189	0.00051955	3.0166	0.0012858	426.2463777251797	68.917	0.47072	69.239	68.967	69.438	0.32224					39	14	4	0	0	0	0.89008	2	28821	28821;28861		2.5775	0	1	7668300	+		16574	13052	7776	7814	19619;19620	19619					0.0461147102294035
LAAAVREAR	9	Unmodified	_LAAAVREAR_					0	0	0			REV__nc|ENSG00000160305|Q14689-5|DIP2A	REV__nc|ENSG00000160305|Q14689-5|DIP2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.7860900759697	2	478.785433	955.556313	2.1649	0.0010365	-0.42093	-0.00020153	1.7439	0.00083497	478.78511205098243	74.98	0.43968	74.98	74.745	75.185	0					39	13	4	0	0	0	0.77526	1	31244	31244		4.3292	2.0265	1	8706400	+		16575	10599	7777	7815	19621	19621					0.0767569825721921
LAAAVREAR	9	Unmodified	_LAAAVREAR_					0	0	0			REV__nc|ENSG00000160305|Q14689-5|DIP2A	REV__nc|ENSG00000160305|Q14689-5|DIP2A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	478.785433	955.556313	2.7409	0.0013123	0.18767	8.9854E-05	2.9285	0.0014021	478.78536230666595	73.481	0.52819	75.277	75.039	75.567	1.7962	0.15764	0.00050475	NaN	4.3292	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3940200	+		16576	10599	7777	7815							0.0767569825721921
LAACWEHQ	8	Unmodified	_LAACWEHQ_					0	0	0		ENST00000491583.1_1_3:75475229-75475748:-|nuORF;ENST00000489609.5_1_3:75472285-75480052:-|nuORF;ENST00000478666.5_1_3:75472114-75480052:-|nuORF;ENST00000484945.5_1_3:75472114-75480048:-|nuORF;ENST00000459803.5_1_3:75472114-75480048:-|nuORF	ENST00000491583.1_1_3:75475229-75475748:-|nuORF	ENST00000491583.1_1_3:75475229-75475748:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2185851931572	2	479.215995	956.417436	2.6095	0.0012505	0.25722	0.00012326	2.8667	0.0013738	479.2164950514624	76.119	0.60283	77.413	77.19	77.792	1.2938					126	19	10	0	0	0	0.88409	1	32046	32046		6.3541	0	1	40450000			16577	6661	7778	7816	19622	19622					-0.06251587702604411
LAADIFAIA	9	Unmodified	_LAADIFAIA_					0	0	0		nc|ENSG00000185716|Q8NHV5-3|MOSMO;ENSG00000185716|ENST00000542527|MOSMO	nc|ENSG00000185716|Q8NHV5-3|MOSMO	nc|ENSG00000185716|Q8NHV5-3|MOSMO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	904.5156127810478	1	904.513845	903.506569	2.1863	0.0019775	-0.43845	-0.00039658	1.7478	0.0015809	904.5135585212957	76.148	0.79185	77.442	77.128	77.92	1.2938					85	25	5	0	0	0	0.046276	5	31928	31879;31928;31980;32032;32074		70.716	13.244	1	240310000			16578	4757	7779	7817	19623;19624;19625;19626;19627	19624					0.050955705285559816
LAADIFAIA	9	Unmodified	_LAADIFAIA_					0	0	0		nc|ENSG00000185716|Q8NHV5-3|MOSMO;ENSG00000185716|ENST00000542527|MOSMO	nc|ENSG00000185716|Q8NHV5-3|MOSMO	nc|ENSG00000185716|Q8NHV5-3|MOSMO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	904.5141479372978	1	904.513845	903.506569	2.5564	0.0023123	-1.5003	-0.001357	1.0561	0.00095529	904.5125907466988	75.611	0.66193	77.392	77.135	77.797	1.7817					75	21	5	0	0	0	0.046276	4	31744	31692;31744;31796;31836		70.716	13.244	1	215080000			16579	4757	7779	7817	19628;19629;19630;19631	19629					0.050955705285559816
LAADLSLHS	9	Unmodified	_LAADLSLHS_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	463.7519409060478	2	463.750724	925.486896	2.709	0.0012563	-0.11889	-5.5136E-05	2.5901	0.0012011	463.7507804310654	76.123	0.5726	77.417	77.19	77.762	1.2938					31	18	2	0	0	0	0.12174	1	31968	31968		42.095	4.1206	1	7300600			16580	1488	7780	7818	19632	19632					0.021171945178025453
LAADLSLHS	9	Unmodified	_LAADLSLHS_					0	0	0		ENSG00000104885|ENST00000398665|DOT1L;nc|ENSG00000104885|Q8TEK3-1|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	ENSG00000104885|ENST00000398665|DOT1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	463.7513610720634	2	463.750724	925.486896	3.0263	0.0014034	-0.90853	-0.00042133	2.1178	0.00098211	463.75039245702067	75.638	0.69314	77.419	77.166	77.859	1.7817					33	22	2	0	0	0	0.13873	2	31761	31699;31761		39.957	3.8303	1	7385100			16581	1488	7780	7818	19633;19634	19634					0.021171945178025453
LAAERFPVV	9	Unmodified	_LAAERFPVV_					0	0	0			REV__ENSG00000117597|ENST00000491415|UTP25	REV__ENSG00000117597|ENST00000491415|UTP25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2955810427666	2	501.292559	1000.57057	2.4857	0.0012461	1.5741	0.00078907	4.0598	0.0020351	501.2936781731848	66.363	0.57076	66.687	66.305	66.876	0.32449					30	17	3	0	0	0	0.66839	1	27795	27795		8.5933	2.2392	1	1282600	+		16582	9505	7781	7819	19635	19635					0.07030350685522535
LAAGAGRV	8	Unmodified	_LAAGAGRV_					0	0	0			REV__ENST00000430365.6_1_3:11685324-11685363:-|nuORF	REV__ENST00000430365.6_1_3:11685324-11685363:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	714.4282714724541	1	714.425699	713.418422	1.4067	0.001005	4.4153	0.0031544	5.822	0.0041594	714.4289382953705	101.52	0.3009	101.52	101.26	101.56	0					14	9	2	0	0	0	0.89008	1	42505	42505		2.5775	0	1	2174600	+		16583	12486	7782	7820	19636	19636					0.0502499472860336
LAALMLVM	8	Unmodified	_LAALMLVM_					0	0	0			REV__nc|ENSG00000110484|Q13296-2|SCGB2A2	REV__nc|ENSG00000110484|Q13296-2|SCGB2A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	861.4939453005791	1	861.493644	860.486367	3.1046	0.0026746	-1.1287	-0.00097235	1.9759	0.0017022	861.4921304892132	107.75	0.14709	107.91	107.85	107.99	0.15795					16	7	3	0	0	0	0.89176	1	46390	46390		0.79363	0	1	39619000	+		16584	9299	7783	7821	19637	19637					0.05054360272742997
LAAPGARSPL	10	Unmodified	_LAAPGARSPL_					0	0	0			REV__ENSG00000182890|ENST00000328078|GLUD2	REV__ENSG00000182890|ENST00000328078|GLUD2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1915466189384	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.311	1	93.479	92.979	93.979	0.16835								0	0	0	0.66218	1	39065	39065		0.77653	0	1		+		16585	11368	7784	7822	19638	19638					0.07245180025711306
LAAPKRCA	8	Unmodified	_LAAPKRCA_					0	0	0		nc|ENSG00000250067|A6XGL0-2|YJEFN3;ENST00000458210.7_1_19:19645671-19648330:+|nuORF;ENSG00000250067|ENST00000514277|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2413818240166	2	415.239273	828.463992	1.78	0.00073912	3.1536	0.0013095	4.9336	0.0020486	415.24059372005166	69.175	0.32359	70.541	70.35	70.674	1.3657					28	10	3	0	0	0	0.89176	1	28996	28996		0.79363	0.10326	1	7533800			16586	5379	7785	7823	19639	19639					0.04289896919340208
LAAPPRRLRS	10	Unmodified	_LAAPPRRLRS_					0	0	0		FCHO1|p.V737Cfs*62|1|0.38|ENSG00000130475|chr19:17784217-17784217|G/-|frameshift_variant;nc|ENSG00000130475|O14526-3|FCHO1;RPL18A-FCHO1|2|fusion;RPL18A-FCHO1|1|fusion;nc|ENSG00000130475|O14526-2|FCHO1;ENSG00000130475|ENST00000596536|FCHO1;chr19:17787846-17788270|411|12.8|0.52|4.63|+|ENST00000594202|FCHO1,FCHO1	FCHO1|p.V737Cfs*62|1|0.38|ENSG00000130475|chr19:17784217-17784217|G/-|frameshift_variant	FCHO1|p.V737Cfs*62|1|0.38|ENSG00000130475|chr19:17784217-17784217|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8555175662041	2	568.854181	1135.69381	2.2108	0.0012576	-0.22364	-0.00012722	1.9872	0.0011304	568.8540865699008	88.409	0.8358	88.409	88.119	88.955	0					87	26	5	0	0	0	0.89803	1	36948	36948		0.45834	0	1	105930000			16587	225	7786	7824	19640	19640					0.13139026856629243
LAAPVISVL	9	Unmodified	_LAAPVISVL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	882.5681640505791	1	882.565881	881.558604	3.3891	0.0029911	-0.8553	-0.00075485	2.5338	0.0022363	882.5651579899471	73.918	0.47195	75.236	74.966	75.438	1.318					33	14	3	0	0	0	0.02596	2	30984	30984;31032		93.883	19.487	1	8383800			16588	3111	7787	7825	19641;19642	19641					0.11308733942325944
LAAPVISVL	9	Unmodified	_LAAPVISVL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7875549197197	2	441.786579	881.558604	2.7849	0.0012303	-0.40534	-0.00017907	2.3796	0.0010513	441.78667841740526	73.388	0.40325	75.184	74.974	75.377	1.7962					30	12	3	0	0	0	0.089861	1	30739	30739		52.693	9.7251	1	4245900			16589	3111	7787	7825	19643	19643					0.11308733942325944
LAAPVISVL	9	Unmodified	_LAAPVISVL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	882.5676147341728	1	882.565881	881.558604	2.5619	0.002261	-0.18422	-0.00016258	2.3777	0.0020984	882.5658544307952	73.44	0.46604	75.236	74.974	75.44	1.7962					34	14	3	0	0	0	0.02596	3	30748	30748;30795;30839		93.883	19.487	1	9296400			16590	3111	7787	7825	19644;19645;19646	19644					0.11308733942325944
LAARRPVQ	8	Unmodified	_LAARRPVQ_					0	0	0		ENSG00000198944|ENST00000378693|SOWAHA	ENSG00000198944|ENST00000378693|SOWAHA	ENSG00000198944|ENST00000378693|SOWAHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.1923095583916	3	304.190888	909.550834	0.060585	1.8429E-05	3.1994	0.00097322	3.26	0.00099165	304.1922324510868	28.222	0.67293	29.998	29.54	30.213	1.7754					36	21	4	0	0	0	0.88663	1	11827	11827		3.2813	0	1	8617900			16591	5107	7788	7826	19647	19647					0.09244019465415931
LAARRRKL	8	Unmodified	_LAARRRKL_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3353759646416	2	492.332885	982.651216	2.954	0.0014544	1.5479	0.00076207	4.5019	0.0022164	492.3336708213271	70.342	0.50868	71.695	71.397	71.906	1.3536					37	15	3	0	0	0	0.47134	1	29465	29465		49.669	5.2619	1	3993600			16592	983	7789	7827	19648	19648					0.1591967651906998
LAARRRKL	8	Unmodified	_LAARRRKL_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3356201052666	2	492.332885	982.651216	2.9191	0.0014371	2.1048	0.0010363	5.0239	0.0024734	492.3338350692007	69.719	0.44458	71.557	71.372	71.817	1.8378					32	13	3	0	0	0	0.47134	1	29216	29216		49.669	5.2619	1	3400700			16593	983	7789	7827	19649	19649					0.1591967651906998
LAARVPPK	8	Unmodified	_LAARVPPK_					0	0	0		ENST00000511048.1_1_5:139028565-139059991:+|nuORF;ENST00000502336.5_1_5:139028565-139059477:+|nuORF	ENST00000511048.1_1_5:139028565-139059991:+|nuORF	ENST00000511048.1_1_5:139028565-139059991:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	426.2762634158134	2	426.276712	850.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.189	1	94.189	93.689	94.689	0								0	0	0	1.0178	1	39362	39362		2.5775	0	1				16594	6978	7790	7828	19650	19650					0.10762402722230036
LAARVPPK	8	Unmodified	_LAARVPPK_					0	0	0		ENST00000511048.1_1_5:139028565-139059991:+|nuORF;ENST00000502336.5_1_5:139028565-139059477:+|nuORF	ENST00000511048.1_1_5:139028565-139059991:+|nuORF	ENST00000511048.1_1_5:139028565-139059991:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	426.2747375369072	2	426.276712	850.538872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.999	1	94.144	93.644	94.644	0.14493								0	0	0	1.0178	1	39344	39344		2.5775	0	1				16595	6978	7790	7828	19651	19651					0.10762402722230036
LAASTEFFG	9	Unmodified	_LAASTEFFG_					0	0	0			REV__ENSG00000152214|ENST00000326695|RIT2	REV__ENSG00000152214|ENST00000326695|RIT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7347900271416	2	471.732	941.449448	3.082	0.0014539	2.663	0.0012562	5.745	0.0027101	471.73326501141224	75.659	0.50744	77.441	77.196	77.704	1.7817					42	16	3	0	0	0	0.12251	1	31792	31792		46.921	10.877	1	7315600	+		16596	10415	7791	7829	19652	19652					-0.023618967478114428
LAATHDEGCC	10	Unmodified	_LAATHDEGCC_					0	0	0			REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	510.3101684451103	2	510.199684	1018.38482	1.8921	0.00096537	-0.27127	-0.0001384	1.6209	0.00082697	510.1996303749181	67.785	0.28486	67.785	67.663	67.948	0					12	8	2	0	0	0	0.12519	1	28282	28282		7.2892	3.3448	1	603840	+		16597	14181	7792	7830	19653	19653					-0.12364162887763541
LAATHDEGCC	10	Unmodified	_LAATHDEGCC_					0	0	0			REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	509.8041869997978	2	510.199684	1018.38482	2.0357	0.0010386	-0.96621	-0.00049296	1.0695	0.00054567	510.19880037923	65.967	0.33849	67.875	67.706	68.045	1.9085					26	10	4	0	0	0	0.12519	1	27641	27641		3.9444	1.3669	1	1790200	+		16598	14181	7792	7830	19654	19654					-0.12364162887763541
LAAYHPWVV	9	Unmodified	_LAAYHPWVV_					0	0	0		ENSG00000224051|ENST00000343938|CPTP	ENSG00000224051|ENST00000343938|CPTP	ENSG00000224051|ENST00000343938|CPTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.2885009646416	2	528.287277	1054.56	1.7307	0.00091433	1.8753	0.0009907	3.6061	0.001905	528.2877795527547	48.214	0.40891	49.602	49.365	49.774	1.388					30	12	3	0	0	0	0.0084224	3	20185	20137;20185;20238		109.15	68.706	1	4941700			16599	5282	7793	7831	19655;19656;19657	19656					0.034903680310890195
LAAYHPWVV	9	Unmodified	_LAAYHPWVV_					0	0	0		ENSG00000224051|ENST00000343938|CPTP	ENSG00000224051|ENST00000343938|CPTP	ENSG00000224051|ENST00000343938|CPTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2883178591728	2	528.287277	1054.56	2.6269	0.0013877	0.89143	0.00047093	3.5183	0.0018587	528.2869851090585	47.743	0.37019	49.719	49.466	49.836	1.976					27	11	3	0	0	0	0.026036	3	19989	19938;19989;20030		93.763	61.646	1	4661300			16600	5282	7793	7831	19658;19659;19660	19659					0.034903680310890195
LACELRPSL	9	Unmodified	_LACELRPSL_					0	0	0			REV__chr20:31744675-31757407|219|13.39|0.09|7.19|+|1|TE_info:AluJb,AluJb_dup120112,Alu,SINE,donor,-,31744514,31744675|None,TPX2|1	REV__chr20:31744675-31757407|219|13.39|0.09|7.19|+|1|TE_info:AluJb,AluJb_dup120112,Alu,SINE,donor,-,31744514,31744675|None,TPX2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2809631228447	2	501.276052	1000.53755	2.939	0.0014733	4.0082	0.0020092	6.9473	0.0034825	501.2777931109696	62.09	0.38091	63.507	63.303	63.683	1.4177					19	11	2	0	0	0	0.34572	1	26063	26063		23.148	1.4018	1	1235300	+		16601	8306	7794	7832	19661	19661					0.03730400571157588
LACELRPSL	9	Unmodified	_LACELRPSL_					0	0	0			REV__chr20:31744675-31757407|219|13.39|0.09|7.19|+|1|TE_info:AluJb,AluJb_dup120112,Alu,SINE,donor,-,31744514,31744675|None,TPX2|1	REV__chr20:31744675-31757407|219|13.39|0.09|7.19|+|1|TE_info:AluJb,AluJb_dup120112,Alu,SINE,donor,-,31744514,31744675|None,TPX2|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	501.276052	1000.53755	2.939	0.0014733	4.0082	0.0020092	6.9473	0.0034825	501.2777931109696	62.09	0.38091	63.507	63.303	63.683	1.4177	-0.05559	-0.0014369	NaN	23.148	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1235300	+		16602	8306	7794	7832							0.03730400571157588
LACLCHCQD	9	Unmodified	_LACLCHCQD_					0	0	0		nc|ENSG00000185437|P55822|SH3BGR	nc|ENSG00000185437|P55822|SH3BGR	nc|ENSG00000185437|P55822|SH3BGR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.2013122439384	2	503.201173	1004.38779	2.2428	0.0011286	-1.1957	-0.00060167	1.0471	0.0005269	503.2010370933166	43.066	1.0671	43.39	43.176	44.244	0.32389					84	33	4	0	0	0	0.75267	1	18268	18268		5.2307	2.3415	1	1526000			16603	7948	7795	7833	19662	19662					-0.11422611034606689
LADALISIV	9	Unmodified	_LADALISIV_					0	0	0			REV__APH1A|p.N136S|1|0.1|ENSG00000117362|chr1:150267430-150267430|T/C|missense_variant	REV__APH1A|p.N136S|1|0.1|ENSG00000117362|chr1:150267430-150267430|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	914.5579711794853	1	914.55571	913.548434	1.7387	0.0015901	0.49563	0.00045328	2.2343	0.0020434	914.5560529170336	74.604	0.34712	74.604	74.43	74.777	0					22	10	3	0	0	0	0.12174	1	31032	31032		42.095	3.9434	1	2121600	+		16604	8130	7796	7834	19663	19663					0.08820126217096913
LADAMMDSLPL	11	Unmodified	_LADAMMDSLPL_					0	0	0		tr|A0A553SK92|A0A553SK92_NIACIAcetolactatesynthaseOS=NialliacirculansOX=1397GN=ilvBPE=3SV=1	tr|A0A553SK92|A0A553SK92_NIACIAcetolactatesynthaseOS=NialliacirculansOX=1397GN=ilvBPE=3SV=1	tr|A0A553SK92|A0A553SK92_NIACIAcetolactatesynthaseOS=NialliacirculansOX=1397GN=ilvBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7878906130791	2	588.785592	1175.55663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.261	1	70.627	70.127	71.127	1.3657								0	0	0	0.63768	1	29066	29066		13.906	0	1				16605	16277	7797	7835	19664	19664					-0.024124309200942662
LADDPILEV	9	Unmodified	_LADDPILEV_					0	0	0		tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7676879763603	2	492.76604	983.517527	2.9167	0.0014373	-0.31773	-0.00015657	2.599	0.0012807	492.76568375957925	62.066	1.6737	63.484	62.896	64.57	1.4177					112	53	3	0	0	0	0.19075	3	26099	25946;26099;26152		34.102	7.2188	1	2276700			16606	16235	7798	7836	19665;19666;19667	19666					0.02510928112201327
LADDPILEV	9	Unmodified	_LADDPILEV_					0	0	0		tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	tr|A0A553SJA0|A0A553SJA0_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16405PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7674438357353	2	492.76604	983.517527	2.7488	0.0013545	-0.58855	-0.00029002	2.1603	0.0010645	492.76573375386704	61.727	1.3927	63.684	63.089	64.482	1.9571					95	44	3	0	0	0	0.24063	3	25760	25760;25914;25970		28.487	5.3384	1	2028500			16607	16235	7798	7836	19668;19669;19670	19668					0.02510928112201327
LADQWQFL	8	Unmodified	_LADQWQFL_					0	0	0		SPTAN1|p.Q1734Rfs*19|1|0.63|ENSG00000197694|chr9:128615697-128615725|CCAAGTAAAGGACAAGAGGGACACCATCA/-|frameshift_variant;SPTAN1|p.M1752Ifs*16|1|0.07|ENSG00000197694|chr9:128615752-128615753|-/TTCCTGAGTTCTTATG|frameshift_variant;nc|ENSG00000197694|Q13813-3|SPTAN1;nc|ENSG00000197694|Q13813|SPTAN1;ENSG00000197694|ENST00000372739|SPTAN1	SPTAN1|p.Q1734Rfs*19|1|0.63|ENSG00000197694|chr9:128615697-128615725|CCAAGTAAAGGACAAGAGGGACACCATCA/-|frameshift_variant	SPTAN1|p.Q1734Rfs*19|1|0.63|ENSG00000197694|chr9:128615697-128615725|CCAAGTAAAGGACAAGAGGGACACCATCA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7613708376884	2	510.761092	1019.50763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.722	1	77.503	77.003	78.003	1.7817								0	0	0	1.0178	1	31767	31767		11.114	1.767	1				16608	5020	7799	7837	19671	19671					-0.0013421510253692759
LADVLDESY	9	Unmodified	_LADVLDESY_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7493163943291	2	512.745305	1023.47606	2.0886	0.0010709	3.9008	0.0020001	5.9894	0.003071	513.2489113337292	75.551	0.25234	75.551	75.471	75.723	0					13	7	2	0	0	0	0.68551	1	31488	31488		7.9102	2.1497	1	1245900			16609	16072	7800	7838	19672	19672					-0.03474252647151843
LADVLDESY	9	Unmodified	_LADVLDESY_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	512.745305	1023.47606	2.6765	0.0013724	5.5986	0.0028707	8.2751	0.004243	512.7478306320274	75.15	0.28688	75.475	75.329	75.616	0.32464	-0.010154	0.00035626	NaN	7.9102	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896640			16610	16072	7800	7838							-0.03474252647151843
LADVLDESY	9	Unmodified	_LADVLDESY_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	512.745305	1023.47606	3.7203	0.0019076	6.69	0.0034303	10.41	0.0053378	512.7476043106765	74.139	0.4319	75.457	75.279	75.711	1.318	-0.027617	0.0014755	NaN	7.9102	34	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1451700			16611	16072	7800	7838							-0.03474252647151843
LADVLDESY	9	Unmodified	_LADVLDESY_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	512.745305	1023.47606	3.2197	0.0016509	4.8024	0.0024624	8.0221	0.0041133	512.7475135389798	73.66	0.28104	75.456	75.286	75.567	1.7962	-0.02841	-0.00046027	NaN	7.9102	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1197100			16612	16072	7800	7838							-0.03474252647151843
LAEAALELREE	11	Unmodified	_LAEAALELREE_					0	0	0		nc|ENSG00000166140|Q96K21-4|ZFYVE19;nc|ENSG00000166140|Q96K21-2|ZFYVE19;ENSG00000166140|ENST00000355341|ZFYVE19	nc|ENSG00000166140|Q96K21-4|ZFYVE19	nc|ENSG00000166140|Q96K21-4|ZFYVE19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3311645388603	2	622.330067	1242.64558	0.94133	0.00058582	1.0702	0.00066603	2.0115	0.0012518	622.3308705906878	26.174	0.28234	27.445	27.309	27.591	1.2715					21	8	3	0	0	0	0.28398	1	10972	10972		33.445	3.6043	1	1438200			16613	3881	7801	7839	19673	19673					0.033964436354153804
LAEAALELREE	11	Unmodified	_LAEAALELREE_					0	0	0		nc|ENSG00000166140|Q96K21-4|ZFYVE19;nc|ENSG00000166140|Q96K21-2|ZFYVE19;ENSG00000166140|ENST00000355341|ZFYVE19	nc|ENSG00000166140|Q96K21-4|ZFYVE19	nc|ENSG00000166140|Q96K21-4|ZFYVE19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.8308593630791	2	622.330067	1242.64558	0.19243	0.00011976	0.77399	0.00048168	0.96642	0.00060143	622.3304971949489	25.783	0.27062	27.499	27.368	27.639	1.7167					17	8	3	0	0	0	0.15597	1	10775	10775		45.74	15.103	1	1137400			16614	3881	7801	7839	19674	19674					0.033964436354153804
LAEFVFVKL	9	Unmodified	_LAEFVFVKL_					0	0	0			REV__tr|A0A7D6ZRB1|A0A7D6ZRB1_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03285PE=4SV=1	REV__tr|A0A7D6ZRB1|A0A7D6ZRB1_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03285PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1935912966728	2	533.320786	1064.62702	5.0527	0.0026947	-1.2595	-0.00067171	3.7932	0.002023	533.319877399138	87.825	0.31813	88.917	88.734	89.052	1.0918					17	9	2	0	0	0	0.11812	1	36975	36975		0.52476	0	1	911080	+		16615	15687	7802	7840	19675	19675					0.09728978522184661
LAEKVELPL	9	Unmodified	_LAEKVELPL_					0	0	0			REV__ENSG00000171492|ENST00000337338|LRRC8D	REV__ENSG00000171492|ENST00000337338|LRRC8D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3088561892509	2	506.307875	1010.6012	2.1463	0.0010867	0.58811	0.00029776	2.7344	0.0013844	506.3081114619105	76.73	0.4482	78.498	78.288	78.736	1.7672					32	13	3	0	0	0	0.033794	1	32214	32214		81.613	3.4637	1	5601800	+		16616	11029	7803	7841	19676	19676					0.09632084279917308
LAELINDKQ	9	Unmodified	_LAELINDKQ_					0	0	0			REV__tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	REV__tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.8044311404228	2	522.290214	1042.56587	4.6209	0.0024135	0.89745	0.00046873	5.5184	0.0028822	522.290152443318	88.969	0.44818	90.416	90.146	90.594	1.4467					15	13	2	0	0	0	0.10339	1	37532	37532		20.454	2.3186	1	645590	+		16617	15748	7804	7842	19677	19677					0.04629421752088092
LAEPLVQRG	9	Unmodified	_LAEPLVQRG_					0	0	0		ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5736572146416	1	982.568006	981.56073	4.8542	0.0047696	1.742	0.0017116	6.5962	0.0064812	982.5700142970992	87.757	0.5426	89.252	89.142	89.684	1.4953					19	16	2	0	0	0	0.39927	1	37014	37014		20.454	2.3186	1	877580			16618	5249	7805	7843	19678	19678					0.06921162680134785
LAEQEPLTI	9	Unmodified	_LAEQEPLTI_					0	0	0		ENST00000590846.1_1_18:31804054-31804756:-|nuORF;ENST00000588355.1_1_18:31804054-31804846:-|nuORF	ENST00000590846.1_1_18:31804054-31804756:-|nuORF	ENST00000590846.1_1_18:31804054-31804756:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2774536013603	2	507.279315	1012.54408	2.0313	0.0010305	1.743	0.00088418	3.7743	0.0019146	507.78190681491725	58.736	1.2961	60.154	59.909	61.205	1.4181					78	41	3	0	0	0	0.083604	1	24788	24788		54.774	0.94076	1	11402000			16619	7467	7806	7844	19679	19679					0.03830617003529824
LAERNAWLRLA	11	Unmodified	_LAERNAWLRLA_					0	0	0		USHBP1|p.Q198Pfs*21|1|0.1|ENSG00000130307|chr19:17262586-17262601|GCCTCCAGGGAGGCCT/-|frameshift_variant;USHBP1|p.F259Lfs*31|1|0.05|ENSG00000130307|chr19:17259727-17259728|-/T|frameshift_variant;ENSG00000130307|ENST00000252597|USHBP1	USHBP1|p.Q198Pfs*21|1|0.1|ENSG00000130307|chr19:17262586-17262601|GCCTCCAGGGAGGCCT/-|frameshift_variant	USHBP1|p.Q198Pfs*21|1|0.1|ENSG00000130307|chr19:17262586-17262601|GCCTCCAGGGAGGCCT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8799316287041	2	656.877853	1311.74115	2.3123	0.0015189	-0.12415	-8.1549E-05	2.1882	0.0014374	656.8779783447454	77.335	0.28621	78.616	78.474	78.76	1.2809					18	8	3	0	0	0	0.85967	1	32467	32467		12.241	0	1	2027400			16620	2425	7807	7845	19680	19680					0.09775261336994845
LAERTEQIHEK	11	Unmodified	_LAERTEQIHEK_					0	0	0			REV__tr|A0A7D6ZS84|A0A7D6ZS84_9CLOTEndonucleaseMutS2OS=ClostridiumintestinaleOX=36845GN=mutS2PE=3SV=1	REV__tr|A0A7D6ZS84|A0A7D6ZS84_9CLOTEndonucleaseMutS2OS=ClostridiumintestinaleOX=36845GN=mutS2PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9091064333916	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.563	1	38.847	38.347	39.347	1.284								0	0	0	0.63775	1	15770	15770		0.50596	0	1		+		16621	15702	7808	7846	19681	19681					0.042583396495729176
LAEVDENK	8	Unmodified	_LAEVDENK_					0	0	0			REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1725036501884	2	459.232364	916.450176	0.73281	0.00033653	0.099329	4.5615E-05	0.83214	0.00038215	459.2319306957695	14.565	0.58703	14.565	14.256	14.843	0					31	18	3	0	0	0	2.3239	1	5923	5923		7.9102	1.187	1	828750	+		16622	12492	7809	7847	19682	19682					-0.011391020987616685
LAEWRRGL	8	Unmodified	_LAEWRRGL_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7888671755791	2	500.787976	999.561398	2.1815	0.0010925	-1.8226	-0.00091274	0.3589	0.00017973	500.78719735827707	38.822	0.18472	39.131	39	39.184	0.30857					8	5	2	0	0	0	0.86202	1	16333	16333		15.768	0	1	496920			16623	3966	7810	7848	19683	19683					0.06160002119861474
LAEWRRGL	8	Unmodified	_LAEWRRGL_					0	0	0		ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	ENSG00000167378|ENST00000422989|IRGQ	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	500.787976	999.561398	0.82244	0.00041187	1.0368	0.0005192	1.8592	0.00093107	500.78820627012163	37.524	0.19501	38.808	38.73	38.925	1.284	-0.16123	0.0014639	NaN	15.768	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845610			16624	3966	7810	7848							0.06160002119861474
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.7614013552666	2	452.760561	903.506569	2.7099	0.0012269	-0.57318	-0.00025951	2.1367	0.00096742	452.7603187899219	76.173	0.66436	77.467	77.128	77.792	1.2938					70	21	5	0	0	0	0.078975	4	31898	31898;31941;31993;32048		56.541	2.9657	1	59725000	+		16625	10322	7811	7849	19684;19685;19686;19687	19684					0.0509557052856735
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	904.5195190310478	1	904.513845	903.506569	2.5564	0.0023123	-1.5003	-0.001357	1.0561	0.00095529	904.5125907466988	75.611	0.66193	77.392	77.135	77.797	1.7817					75	21	5	0	0	0	0.078975	1	31643	31643		56.541	2.9657	1	215080000	+		16626	10322	7811	7849	19688	19688					0.0509557052856735
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.7610351443291	2	452.760561	903.506569	2.9361	0.0013294	-1.5923	-0.00072092	1.3438	0.00060844	452.7598402268542	75.581	0.56835	77.363	77.166	77.734	1.7817					61	18	5	0	0	0	0.052478	3	31718	31668;31718;31771		67.035	12.134	1	51802000	+		16627	10322	7811	7849	19689;19690;19691	19690					0.0509557052856735
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	905.5187866091728	1	904.513845	903.506569	2.5737	0.0023279	1.8917	0.001711	4.4653	0.0040389	904.5156168786892	76.002	0.47022	77.769	77.689	78.159	1.7672					15	14	2	0	0	0	0.34572	1	31898	31898		23.148	1.4018	1	1567500	+		16628	10322	7811	7849	19692	19692					0.0509557052856735
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.760561	903.506569	2.7099	0.0012269	-0.57318	-0.00025951	2.1367	0.00096742	452.7603187899219	76.173	0.66436	77.467	77.128	77.792	1.2938	0.05224	0.00038707	NaN	67.035	70	21	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59725000	+		16629	10322	7811	7849							0.0509557052856735
LAFADLAAL	9	Unmodified	_LAFADLAAL_					0	0	0			REV__ENSG00000147119|ENST00000276055|CHST7	REV__ENSG00000147119|ENST00000276055|CHST7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	452.760561	903.506569	2.9361	0.0013294	-1.5923	-0.00072092	1.3438	0.00060844	452.7598402268542	75.581	0.56835	77.363	77.166	77.734	1.7817	-0.05224	-0.00053575	NaN	67.035	61	18	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51802000	+		16630	10322	7811	7849							0.0509557052856735
LAFFSRKL	8	Unmodified	_LAFFSRKL_					0	0	0			REV__nc|ENSG00000136997|P01106-1|MYC	REV__nc|ENSG00000136997|P01106-1|MYC	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3002807497978	2	491.297645	980.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.42	1	45.364	44.864	45.864	1.9438								0	0	0	1.0178	1	18206	18206		6.3541	0	1		+		16631	10007	7812	7850	19693	19693					0.08966958410769621
LAFGCAVRE	9	Unmodified	_LAFGCAVRE_					0	0	0			REV__ENST00000520539.5_1_8:103424406-103424691:-|nuORF	REV__ENST00000520539.5_1_8:103424406-103424691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2483398318291	2	483.247295	964.480036	1.7784	0.00085943	1.304	0.00063016	3.0825	0.0014896	483.24776518491257	71.42	0.28436	71.42	71.288	71.573	0					14	8	2	0	0	0	0.75267	1	29743	29743		5.2307	0.47466	1	900540	+		16632	13624	7813	7851	19694	19694					-0.0036244163441097044
LAFLAAGFI	9	Unmodified	_LAFLAAGFI_					0	0	0		tr|A0A553SI74|A0A553SI74_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14325PE=3SV=1	tr|A0A553SI74|A0A553SI74_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14325PE=3SV=1	tr|A0A553SI74|A0A553SI74_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14325PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1472045779228	2	461.773471	921.53239	3.5423	0.0016357	-4.0345	-0.001863	-0.49217	-0.00022727	461.772223469483	91.772	0.38419	93.098	92.86	93.244	1.3269					23	11	3	0	0	0	0.116	1	38665	38665		5.2307	2.3415	1	1031400			16633	16184	7814	7852	19695	19695					0.0684846477084875
LAFLFLQA	8	Unmodified	_LAFLFLQA_					0	0	0			REV__ENSG00000170605|ENST00000641329|OR9K2	REV__ENSG00000170605|ENST00000641329|OR9K2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1455566287041	2	461.773471	921.53239	2.111	0.00097482	-4.4166	-0.0020395	-2.3056	-0.0010647	461.7721959130862	93.58	0.31738	93.58	93.488	93.805	0					15	9	2	0	0	0	2.3239	1	39136	39136		5.7604	0	1	372540	+		16634	10992	7815	7853	19696	19696					0.06848464770837381
LAFVPILGR	9	Unmodified	_LAFVPILGR_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3145934939384	2	493.313295	984.612037	3.0547	0.0015069	0.18037	8.8981E-05	3.2351	0.0015959	493.31332406647033	70.6	0.44743	71.953	71.744	72.191	1.3536					40	13	4	0	0	0	0.19075	1	29597	29597		34.102	3.8776	1	9424900	+		16635	9533	7816	7854	19697	19697					0.11911531444866341
LAFVPILGR	9	Unmodified	_LAFVPILGR_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3141052126884	2	493.313295	984.612037	2.4531	0.0012101	-0.1515	-7.4739E-05	2.3016	0.0011354	493.3132086067642	70.06	0.48029	71.898	71.687	72.167	1.8378					35	14	3	0	0	0	0.1735	1	29362	29362		36.044	7.5574	1	6061000	+		16636	9533	7816	7854	19698	19698					0.11911531444866341
LAFVPILGR	9	Unmodified	_LAFVPILGR_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.313295	984.612037	3.0547	0.0015069	0.18037	8.8981E-05	3.2351	0.0015959	493.31332406647033	70.6	0.44743	71.953	71.744	72.191	1.3536	0.02773	0.00017244	NaN	36.044	40	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9424900	+		16637	9533	7816	7854							0.11911531444866341
LAFVPILGR	9	Unmodified	_LAFVPILGR_					0	0	0			REV__ENSG00000119203|ENST00000238112|CPSF3	REV__ENSG00000119203|ENST00000238112|CPSF3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	493.313295	984.612037	2.4531	0.0012101	-0.1515	-7.4739E-05	2.3016	0.0011354	493.3132086067642	70.06	0.48029	71.898	71.687	72.167	1.8378	-0.02773	-0.000155	NaN	36.044	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6061000	+		16638	9533	7816	7854							0.11911531444866341
LAGAAGGK	8	Unmodified	_LAGAAGGK_					0	0	0		ENSG00000126603|ENST00000433375|GLIS2	ENSG00000126603|ENST00000433375|GLIS2	ENSG00000126603|ENST00000433375|GLIS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	322.6886779665947	2	322.689939	643.365324	-1.0143	-0.00032731	-2.6532	-0.00085617	-3.6675	-0.0011835	322.68913897536044	15.692	0.19684	16.518	16.421	16.618	0.82643					27	17	2	0	0	0	0.87803	2	6504	6504;6541		10.183	0	1	4939100			16639	2310	7817	7855	19699;19700	19699					0.029376169459510493
LAGAAGGK	8	Unmodified	_LAGAAGGK_					0	0	0		ENSG00000126603|ENST00000433375|GLIS2	ENSG00000126603|ENST00000433375|GLIS2	ENSG00000126603|ENST00000433375|GLIS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	322.6884338259697	2	322.689939	643.365324	-0.39508	-0.00012749	-2.9515	-0.00095243	-3.3466	-0.0010799	322.68905121082435	15.599	0.11711	16.638	16.566	16.683	1.0392					14	9	2	0	0	0	0.88504	1	6470	6470		5.7604	0	1	6949300			16640	2310	7817	7855	19701	19701					0.029376169459510493
LAGAELLTKI	10	Unmodified	_LAGAELLTKI_					0	0	0			REV__tr|A0A7D7A1H9|A0A7D7A1H9_9CLOTAnkyrinrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15355PE=4SV=1	REV__tr|A0A7D7A1H9|A0A7D7A1H9_9CLOTAnkyrinrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8224365115166	2	514.82115	1027.62775	2.1329	0.0010981	-0.42278	-0.00021766	1.7101	0.0008804	514.8210791471612	71.515	0.3411	72.857	72.689	73.03	1.3415					18	10	2	0	0	0	0.846	1	30065	30065		7.2892	0.93513	1	9118000	+		16641	15824	7818	7856	19702	19702					0.1150377317121638
LAGASAGFLMR	11	Unmodified	_LAGASAGFLMR_					0	0	0			REV__nc|ENSG00000100344|Q9NST1-2|PNPLA3	REV__nc|ENSG00000100344|Q9NST1-2|PNPLA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1095.066455066204	1	1093.58228	1092.575	0.76014	0.00083128	0.95645	0.001046	1.7166	0.0018772	1094.5828326113647	55.629	0.098343	57.598	57.543	57.641	1.9684					6	4	2	0	0	0	0.89563	1	23314	23314		10.074	2.1638	1	3600600	+		16642	8985	7819	7857	19703	19703					0.032414918367749124
LAGGLLYIY	9	Unmodified	_LAGGLLYIY_					0	0	0		tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5612670779228	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.11074	1	31745	31745		45.75	0	1	44767000			16643	16262	7820	7858	19704	19704					0.06200430079695707
LAGGRLPFPV	10	Unmodified	_LAGGRLPFPV_					0	0	0		ENST00000551997.1_1_12:58335402-58335645:+|nuORF	ENST00000551997.1_1_12:58335402-58335645:+|nuORF	ENST00000551997.1_1_12:58335402-58335645:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8755981326103	3	342.874677	1025.6022	0.88883	0.00030476	2.1158	0.00072546	3.0046	0.0010302	342.8752769688571	33.988	0.5747	34.285	34.024	34.599	0.29701					65	18	5	0	0	0	0.89588	1	14251	14251		1.9064	0.25375	1	9107400			16644	7272	7821	7859	19705	19705					0.09042343439477918
LAGGRVFH	8	Unmodified	_LAGGRVFH_					0	0	0		sp|P16789|AN_HCMVAAlkalinenucleaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL98PE=3SV=2;sp|F5HF49|AN_HCMVMAlkalinenucleaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL98PE=3SV=1	sp|P16789|AN_HCMVAAlkalinenucleaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL98PE=3SV=2	sp|P16789|AN_HCMVAAlkalinenucleaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL98PE=3SV=2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.7440978884697	2	428.743037	855.471521	0.97143	0.00041649	1.4552	0.00062391	2.4266	0.0010404	428.7436537289493	52.705	0.56647	54.101	53.743	54.31	1.3966					32	17	2	0	0	0	0.88504	1	22006	22006		5.7604	2.8712	1	5679700			16645	15981	7822	7860	19706	19706					0.03800372511284422
LAGIAGLGIV	10	Unmodified	_LAGIAGLGIV_					0	0	0			REV__tr|A0A553SF75|A0A553SF75_NIACID-3-phosphoglyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08345PE=3SV=1	REV__tr|A0A553SF75|A0A553SF75_NIACID-3-phosphoglyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08345PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	883.5625488162041	1	883.56113	882.553853	2.9863	0.0026386	0.55963	0.00049447	3.5459	0.003133	883.561931692883	72.627	0.49326	73.957	73.702	74.195	1.3297					37	15	3	0	0	0	0.28071	1	30428	30428		40.449	0	1	16460000	+		16646	14693	7823	7861	19707	19707					0.10787849799567084
LAGIGLAAVV	10	Unmodified	_LAGIGLAAVV_					0	0	0		nc|ENSG00000070269|Q9NX78-3|TMEM260;TMEM260|p.V584Nfs*14|1|0.31|ENSG00000070269|chr14:56634923-56634936|TGTGGCCAATGAAG/-|frameshift_variant;ENSG00000070269|ENST00000261556|TMEM260;ENST00000553335.5_1_14:57076000-57086109:+|nuORF	nc|ENSG00000070269|Q9NX78-3|TMEM260	nc|ENSG00000070269|Q9NX78-3|TMEM260	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	883.5628539919853	1	883.56113	882.553853	2.6069	0.0023033	-0.37752	-0.00033356	2.2293	0.0019698	883.560853165399	72.065	0.39506	73.888	73.756	74.151	1.824					35	12	4	0	0	0	0.19438	1	30263	30263		49.669	0	1	13012000			16647	849	7824	7862	19708	19708					0.10787849799555715
LAGLIQVTI	9	Unmodified	_LAGLIQVTI_					0	0	0		ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2989379763603	2	464.29731	926.580068	3.0346	0.001409	0.53945	0.00025046	3.5741	0.0016594	464.2975229764229	73.474	0.33972	75.27	75.132	75.471	1.7962					18	10	2	0	0	0	0.078975	1	30830	30830		56.541	8.1954	1	1948100			16648	1869	7825	7863	19709	19709					0.1138411897103424
LAGLIQVTI	9	Unmodified	_LAGLIQVTI_					0	0	0		ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	464.29731	926.580068	2.1475	0.00099707	0.37845	0.00017572	2.5259	0.0011728	464.2973580103793	75.645	0.25327	75.645	75.502	75.755	0	0.22067	0.00018864	NaN	56.541	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	689740			16649	1869	7825	7863							0.1138411897103424
LAGLIQVTI	9	Unmodified	_LAGLIQVTI_					0	0	0		ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	464.29731	926.580068	3.6837	0.0017103	-0.23215	-0.00010778	3.4515	0.0016025	464.2970925328123	74.04	0.37442	75.358	75.125	75.5	1.318	-0.066127	-0.00037836	NaN	56.541	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2043600			16650	1869	7825	7863							0.1138411897103424
LAGLLPLIT	9	Unmodified	_LAGLLPLIT_					0	0	0		tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.5951415896416	1	910.597181	909.589904	2.7776	0.0025292	0.43412	0.0003953	3.2117	0.0029245	910.5961904170939	96.187	0.16266	96.292	96.187	96.35	0.10499					6	4	2	0	0	0	0.061246	1	40265	40265		63.563	0	1	2343800			16651	16704	7826	7864	19710	19710					0.13149306976424668
LAGLLPLIT	9	Unmodified	_LAGLLPLIT_					0	0	0		tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.8065978884697	2	455.802229	909.589904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.541	1	95.943	95.443	96.443	0.40208								0	0	0	0.041347	1	40199	40199		46.921	0	1				16652	16704	7826	7864	19711	19711					0.13149306976424668
LAGLLPLIT	9	Unmodified	_LAGLLPLIT_					0	0	0		tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	tr|A0A553SUQ4|A0A553SUQ4_NIACIThiolreductantABCexportersubunitCydDOS=NialliacirculansOX=1397GN=cydDPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	910.597181	909.589904	1.4674	0.0013362	0.023009	2.0952E-05	1.4904	0.0013572	910.5967836883789	96.371	0.15798	96.371	96.289	96.447	0	0.039137	-9.9524E-05	NaN	63.563	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2602000			16653	16704	7826	7864							0.13149306976424668
LAGLSAAITL	10	Unmodified	_LAGLSAAITL_					0	0	0		tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2876159548759	2	465.286943	928.559333	1.96	0.00091197	-0.41029	-0.0001909	1.5497	0.00072107	465.2867390162906	38.617	0.35685	39.913	39.681	40.038	1.2961					33	11	4	0	0	0	0.051733	3	16148	16148;16191;16240		88.904	15.936	1	8085400			16654	16581	7827	7865	19712;19713;19714	19712					0.09219528591370363
LAGLSAAITL	10	Unmodified	_LAGLSAAITL_					0	0	0		tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	tr|A0A553SRV5|A0A553SRV5_NIACIPhytoenedesaturaseOS=NialliacirculansOX=1397GN=crtIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2868224978447	2	465.286943	928.559333	1.1912	0.00055426	-0.26692	-0.00012419	0.9243	0.00043007	465.2868225982439	37.982	0.36298	39.802	39.579	39.942	1.8202					28	11	3	0	0	0	0.052892	3	15891	15891;15936;15980		88.904	22.447	1	9902500			16655	16581	7827	7865	19715;19716;19717	19715					0.09219528591370363
LAGLSALPVS	10	Unmodified	_LAGLSALPVS_					0	0	0		ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.7811767458916	2	464.279118	926.543683	1.1466	0.00053233	-0.36809	-0.0001709	0.77848	0.00036143	464.2788358954274	32.042	0.7307	33.867	33.302	34.033	1.8246					54	27	3	0	0	0	0.47063	1	13474	13474		29.082	1.4528	1	4025700			16656	751	7828	7866	19718	19718					0.07747242074322003
LAGPGDPPVLV	11	Unmodified	_LAGPGDPPVLV_					0	0	0			REV__ENSG00000133135|ENST00000255499|RNF128	REV__ENSG00000133135|ENST00000255499|RNF128	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7992431521416	2	517.797675	1033.5808	3.9489	0.0020447	-0.55063	-0.00028512	3.3983	0.0017596	517.7976927160618	97.168	0.11852	97.452	97.39	97.509	0.28442					8	3	3	0	0	0	0.16647	1	40883	40883		43.858	3.9086	1	9972000	+		16657	9871	7829	7867	19719	19719					0.06534913620089355
LAGPLAPTA	9	Unmodified	_LAGPLAPTA_					0	0	0			REV__ENST00000498209.6_1_11:2937879-2942743:+|nuORF	REV__ENST00000498209.6_1_11:2937879-2942743:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	810.4727661013603	1	810.47198	809.464704	1.7834	0.0014454	-1.6313	-0.0013221	0.15207	0.00012325	810.4704444076775	44.059	0.26868	44.383	44.244	44.512	0.32389					12	8	2	0	0	0	0.22519	1	18505	18505		30.225	1.738	1	470160	+		16658	13490	7830	7868	19720	19720					0.05235014840036456
LAGPVQEVACL	11	Unmodified	_LAGPVQEVACL_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.7942382693291	2	550.294442	1098.57433	1.5575	0.00085707	-0.93847	-0.00051643	0.61901	0.00034064	550.2946513816353	56.78	0.27473	58.195	58.033	58.307	1.4145					20	8	3	0	0	0	0.14101	1	23793	23793		18.146	0	1	2619900			16659	2990	7831	7869	19721	19721					0.028986523970615963
LAGQVIVTV	9	Unmodified	_LAGQVIVTV_					0	0	0		LPIN2|p.R280Qfs*4|1|0.14|ENSG00000101577|chr18:2938021-2938022|-/ACCT|frameshift_variant;LPIN2|p.S638Lfs*12|1|0.09|ENSG00000101577|chr18:2925250-2925250|A/-|frameshift_variant;ENSG00000101577|ENST00000677752|LPIN2	LPIN2|p.R280Qfs*4|1|0.14|ENSG00000101577|chr18:2938021-2938022|-/ACCT|frameshift_variant	LPIN2|p.R280Qfs*4|1|0.14|ENSG00000101577|chr18:2938021-2938022|-/ACCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2832824587822	2	450.28166	898.548768	3.3526	0.0015096	0.3871	0.0001743	3.7397	0.0016839	450.28189594539117	61.005	0.34483	62.425	62.281	62.626	1.4196					17	10	2	0	0	0	0.069258	1	25587	25587		60.39	0	1	2219200			16660	1357	7832	7870	19722	19722					0.09543545936946884
LAGRVKHIV	9	Unmodified	_LAGRVKHIV_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2;nc|ENSG00000166046|Q8N4U5-2|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.5704528689384	2	496.821818	991.629084	1.905	0.00094644	-2.1974	-0.0010917	-0.29238	-0.00014526	496.82073954924135	43.536	0.94146	44.889	44.529	45.47	1.3536					41	30	2	0	0	0	0.11799	1	18166	18166		2.3027	0	1	1815500			16661	3878	7833	7871	19723	19723					0.13293452050641008
LAGTPSLLLL	10	Unmodified	_LAGTPSLLLL_					0	0	0			REV__ENST00000583473.5_1_17:63133567-63149541:+|nuORF	REV__ENST00000583473.5_1_17:63133567-63149541:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3205749392509	2	499.318243	996.621933	5.5989	0.0027956	0.8608	0.00042981	6.4597	0.0032254	499.3190168823209	89.135	0.28963	90.155	89.945	90.235	1.0199					14	8	2	0	0	0	0.18471	1	37560	37560		50.855	2.5092	1	1296400	+		16662	14006	7834	7872	19724	19724					0.12348674659574499
LAGVAAAT	8	Unmodified	_LAGVAAAT_					0	0	0			REV__nc|ENSG00000106459|Q16656-3|NRF1	REV__nc|ENSG00000106459|Q16656-3|NRF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.1974365115166	2	337.197596	672.38064	-0.47633	-0.00016062	-0.21063	-7.1024E-05	-0.68696	-0.00023164	337.1975546245712	10.826	0.49334	11.588	11.238	11.731	0.76165					24	19	2	0	0	0	0.87935	1	4458	4458		9.3474	0	1	320790	+		16663	9208	7835	7873	19725	19725					0.031344837431220185
LAGVAAAT	8	Unmodified	_LAGVAAAT_					0	0	0			REV__nc|ENSG00000106459|Q16656-3|NRF1	REV__nc|ENSG00000106459|Q16656-3|NRF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	337.197596	672.38064	-1.6349	-0.00055127	1.372	0.00046264	-0.26285	-8.8632E-05	337.1981090455329	10.959	0.56326	11.629	11.202	11.765	0.66934	0.02038	0.00057146	NaN	9.3474	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	195490	+		16664	9208	7835	7873							0.031344837431220185
LAGVAAAT	8	Unmodified	_LAGVAAAT_					0	0	0			REV__nc|ENSG00000106459|Q16656-3|NRF1	REV__nc|ENSG00000106459|Q16656-3|NRF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	337.197596	672.38064	-0.47633	-0.00016062	-0.21063	-7.1024E-05	-0.68696	-0.00023164	337.1975546245712	10.826	0.49334	11.588	11.238	11.731	0.76165	-0.02038	-0.00049587	NaN	9.3474	24	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320790	+		16665	9208	7835	7873							0.031344837431220185
LAGVLAVGVG	10	Unmodified	_LAGVLAVGVG_					0	0	0		ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	855.5317260622978	1	855.52983	854.522553	1.8257	0.0015619	0.0026058	2.2293E-06	1.8283	0.0015642	855.5300909106783	74.825	0.34258	74.825	74.653	74.995	0					18	10	2	0	0	0	0.28071	1	31137	31137		40.449	0	1	1396400			16666	6863	7836	7874	19726	19726					0.08947276765479728
LAGVLAVGVG	10	Unmodified	_LAGVLAVGVG_					0	0	0		ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	855.5309936404228	1	855.52983	854.522553	2.6066	0.0022301	-1.118	-0.0009565	1.4886	0.0012736	855.5290867850726	74.336	0.34762	74.661	74.486	74.833	0.32464					18	10	2	0	0	0	0.19438	1	31092	31092		49.669	9.2203	1	1723900			16667	6863	7836	7874	19727	19727					0.08947276765479728
LAGVLAVGVG	10	Unmodified	_LAGVLAVGVG_					0	0	0		ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	ENST00000486274.5_1_3:99980082-99980253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	855.5327636599541	1	855.52983	854.522553	3.3282	0.0028474	-0.19933	-0.00017054	3.1289	0.0026769	855.5296093991801	73.225	0.3479	74.555	74.412	74.76	1.3298					22	10	3	0	0	0	0.28071	1	30777	30777		40.449	0	1	2114300			16668	6863	7836	7874	19728	19728					0.08947276765479728
LAGWQMFL	8	Unmodified	_LAGWQMFL_					0	0	0		ENST00000602377.1_1_16:67708740-67708896:-|nuORF	ENST00000602377.1_1_16:67708740-67708896:-|nuORF	ENST00000602377.1_1_16:67708740-67708896:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2507507205009	2	483.249306	964.484059	2.5361	0.0012256	-2.0674	-0.00099906	0.46875	0.00022652	483.2482981573773	69.667	0.40806	71.032	70.876	71.284	1.3657					35	12	4	0	0	0	0.86202	1	29287	29287		15.768	1.1865	1	2881600			16669	7546	7837	7875	19729	19729					0.0003964785930747894
LAHVHRLHH	9	Unmodified	_LAHVHRLHH_					0	0	0		ENST00000475006.1_1_9:140262369-140269195:-|nuORF;nc|ENSG00000187609|Q8N9H8-4|EXD3;ENSG00000187609|ENST00000340951|EXD3	ENST00000475006.1_1_9:140262369-140269195:-|nuORF	ENST00000475006.1_1_9:140262369-140269195:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3169433474541	2	560.317766	1118.62098	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.636	1	91.827	91.327	92.327	0.19042								0	0	0	0.42693	1	38380	38380		0.6015	0	1				16670	4830	7838	7876	19730	19730					0.06641317853882356
LAHVVAITV	9	Unmodified	_LAHVVAITV_					0	0	0			REV__tr|A0A553STA0|A0A553STA0_NIACIDUF4163domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04575PE=4SV=1	REV__tr|A0A553STA0|A0A553STA0_NIACIDUF4163domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04575PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1457702517509	2	461.789653	921.564752	1.4402	0.00066509	0.4274	0.00019737	1.8676	0.00086246	461.7900889734168	56.182	0.27681	58.15	58.026	58.303	1.9684					15	8	2	0	0	0	0.11109	1	23520	23520		14.582	3.4672	1	1090200	+		16671	15233	7839	7877	19731	19731					0.10083252173842538
LAHVVAITV	9	Unmodified	_LAHVVAITV_					0	0	0			REV__tr|A0A553STA0|A0A553STA0_NIACIDUF4163domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04575PE=4SV=1	REV__tr|A0A553STA0|A0A553STA0_NIACIDUF4163domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04575PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	461.789653	921.564752	1.9538	0.00090225	-0.30448	-0.00014061	1.6493	0.00076165	461.78981950998474	56.771	0.27514	58.185	58.063	58.338	1.4145	0.017661	-0.00038665	NaN	14.582	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1591800	+		16672	15233	7839	7877							0.10083252173842538
LAIDRVKLL	9	Unmodified	_LAIDRVKLL_					0	0	0		nc|ENSG00000146143|P49643-2|PRIM2;ENST00000419977.4_1_6:57182469-57246993:+|nuORF;ENSG00000146143|ENST00000615550|PRIM2	nc|ENSG00000146143|P49643-2|PRIM2	nc|ENSG00000146143|P49643-2|PRIM2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	347.2210265994072	3	347.565732	1039.67537	1.1806	0.00041032	4.1887	0.0014558	5.3692	0.0018662	347.5676102485062	45.149	0.19482	46.514	46.401	46.596	1.3653					9	5	2	0	0	0	0.088498	1	18945	18945		20.581	7.0623	1	985580			16673	3136	7840	7878	19732	19732					0.15711472162092832
LAIENVDINI	10	Unmodified	_LAIENVDINI_					0	0	0		tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.3134643435478	2	557.311146	1112.60774	1.1382	0.00063431	0.40406	0.00022519	1.5422	0.0008595	557.3113405135362	67.742	0.21883	67.742	67.601	67.819	0					10	6	2	0	0	0	0.62746	1	28222	28222		21.747	2.4897	1	720990			16674	16140	7841	7879	19733	19733					0.05593977440616982
LAIENVDINI	10	Unmodified	_LAIENVDINI_					0	0	0		tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	tr|A0A553SH79|A0A553SH79_NIACIEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=NialliacirculansOX=1397GN=CEQ21_12350PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.3116943240166	2	557.311146	1112.60774	1.6941	0.00094414	0.55837	0.00031119	2.2525	0.0012553	557.3110426636282	67.363	0.24911	67.685	67.587	67.836	0.32269					12	7	2	0	0	0	0.75645	1	28195	28195		15.847	1.9411	1	494420			16675	16140	7841	7879	19734	19734					0.05593977440616982
LAIFTAALTA	10	Unmodified	_LAIFTAALTA_					0	0	0		ENSG00000136834|ENST00000259357|OR1J1	ENSG00000136834|ENST00000259357|OR1J1	ENSG00000136834|ENST00000259357|OR1J1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2953063845634	2	496.294768	990.574983	2.3851	0.0011837	-1.3162	-0.0006532	1.0689	0.00053051	496.2943166334568	47.056	0.22201	47.386	47.233	47.455	0.33034					9	6	2	0	0	0	0.78468	1	19730	19730		13.906	0.86358	1	293690			16676	2742	7842	7880	19735	19735					0.07931815108406681
LAIGASFTV	9	Unmodified	_LAIGASFTV_					0	0	0		nc|ENSG00000104635|Q15043-2|SLC39A14;ENSG00000104635|ENST00000381237|SLC39A14;SLC39A14-PPP3CC|3|fusion;SLC39A14-PPP3CC|1|fusion;SLC39A14-PPP3CC|2|fusion;nc|ENSG00000104635|Q15043-3|SLC39A14;SLC39A14-PPP3CC|6|fusion;SLC39A14-PPP3CC|4|fusion;SLC39A14-PPP3CC|5|fusion	nc|ENSG00000104635|Q15043-2|SLC39A14	nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	878.5008422732353	1	878.498195	877.490919	3.1785	0.0027923	0.18356	0.00016126	3.3621	0.0029536	878.4983288663944	60.678	0.41133	62.098	61.903	62.314	1.4196					27	12	3	0	0	0	0.0082953	1	25457	25457		109.63	0	1	2868900			16677	1467	7843	7881	19736	19736					0.047272840115169856
LAIGASFTV	9	Unmodified	_LAIGASFTV_					0	0	0		nc|ENSG00000104635|Q15043-2|SLC39A14;ENSG00000104635|ENST00000381237|SLC39A14;SLC39A14-PPP3CC|3|fusion;SLC39A14-PPP3CC|1|fusion;SLC39A14-PPP3CC|2|fusion;nc|ENSG00000104635|Q15043-3|SLC39A14;SLC39A14-PPP3CC|6|fusion;SLC39A14-PPP3CC|4|fusion;SLC39A14-PPP3CC|5|fusion	nc|ENSG00000104635|Q15043-2|SLC39A14	nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	878.5010253787041	1	878.498195	877.490919	3.0925	0.0027168	0.14862	0.00013056	3.2411	0.0028473	878.4983021526704	60.194	0.34544	62.159	61.947	62.292	1.9653					24	10	3	0	0	0	0.0082953	1	25262	25262		109.63	0	1	2577200			16678	1467	7843	7881	19737	19737					0.047272840115169856
LAIGMVNGR	9	Unmodified	_LAIGMVNGR_					0	0	0			REV__ENST00000497497.1_1_10:119013719-119036774:+|nuORF	REV__ENST00000497497.1_1_10:119013719-119036774:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7647582888603	2	465.763112	929.511671	2.7839	0.0012966	-1.7933	-0.00083526	0.99062	0.00046139	465.7642118406075	61.084	0.15577	61.413	61.328	61.484	0.32974					7	4	2	0	0	0	0.7849	1	25589	25589		3.9444	1.0552	1	629970	+		16679	10788	7844	7882	19738	19738					0.044095511195450854
LAIHPLLLVKW	11	Unmodified	_LAIHPLLLVKW_					0	0	0		ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	ENST00000523702.5_1_2:211438076-211442208:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.9501220583916	3	434.948064	1301.82236	4.3498	0.0018919	0.18479	8.0375E-05	4.5346	0.0019723	434.94804979712086	93.592	0.31918	94.464	94.322	94.641	0.87176					26	9	4	0	0	0	1.039	1	39383	39383		0.45452	0.046251	1	3635600			16680	7105	7845	7883	19739	19739					0.18352569047056022
LAIILINSF	9	Unmodified	_LAIILINSF_					0	0	0		tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.3139831423759	2	502.312961	1002.61137	4.3949	0.0022076	-0.77563	-0.00038961	3.6193	0.001818	502.3124026773802	87.223	0.36914	88.718	88.487	88.856	1.4953					31	11	3	0	0	0	0.41943	1	36730	36730		19.439	0	1	2949100			16681	17225	7846	7884	19740	19740					0.11016692005136974
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1126.765429675579	1	1126.75581	1125.74853	3.843	0.0043301	3.2008	0.0036066	7.0439	0.0079367	1126.7590038267026	104.24	0.066833	104.3	104.25	104.32	0.059502					28	8	4	0	0	0	0.89803	1	43906	43906		0.35063	0.35063	1	231990000	+		16682	14707	7847	7885	19741	19741					0.19068600884679654
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2586852908134	3	376.256787	1125.74853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.19	1	105.35	104.85	105.85	0.15859								0	0	0	0.66227	1	44745	44745		0.62683	0.4675	1		+		16683	14707	7847	7885	19742	19742					0.19068600884679654
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1126.763232409954	1	1126.75581	1125.74853	3.1437	0.0035422	3.1031	0.0034964	6.2468	0.0070386	1126.7588794246178	104.14	0.09156	104.31	104.26	104.35	0.1731					23	8	4	0	0	0	0.89803	1	43990	43990		1.4819	1.4819	1	730560000	+		16684	14707	7847	7885	19743	19743					0.19068600884679654
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1126.75581	1125.74853	3.843	0.0043301	3.2008	0.0036066	7.0439	0.0079367	1126.7590038267026	104.24	0.066833	104.3	104.25	104.32	0.059502	-0.020743	-0.00024055	NaN	0.35063	28	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231990000	+		16685	14707	7847	7885							0.19068600884679654
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1126.75581	1125.74853	2.7799	0.0031323	3.9037	0.0043985	6.6836	0.0075308	1126.7596373190133	104.19	0.080505	104.35	104.3	104.38	0.16055	0.030635	0.00055137	NaN	0.35063	26	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730170000	+		16686	14707	7847	7885							0.19068600884679654
LAILLINKKT	10	Unmodified	_LAILLINKKT_					0	0	0			REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	REV__tr|A0A553SFG8|A0A553SFG8_NIACI2-keto-3-deoxygluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_08815PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1126.75581	1125.74853	3.1437	0.0035422	3.1031	0.0034964	6.2468	0.0070386	1126.7588794246178	104.14	0.09156	104.31	104.26	104.35	0.1731	-0.0098918	-0.00035068	NaN	0.35063	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730560000	+		16687	14707	7847	7885							0.19068600884679654
LAIQCKDLHYS	11	Unmodified	_LAIQCKDLHYS_					0	0	0			REV__ENSG00000177409|ENST00000318238|SAMD9L	REV__ENSG00000177409|ENST00000318238|SAMD9L	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.301	1	68.301	67.801	68.801	0								0	0	0	0.63775	1	28445	28445		0.45452	0	1		+		16688	11215	7848	7886	19744	19744					0.010571113458127002
LAIQKHLTI	9	Unmodified	_LAIQKHLTI_					0	0	0		PIK3CB|p.R231H|1|0.42|ENSG00000051382|chr3:138737816-138737816|C/T|missense_variant	PIK3CB|p.R231H|1|0.42|ENSG00000051382|chr3:138737816-138737816|C/T|missense_variant	PIK3CB|p.R231H|1|0.42|ENSG00000051382|chr3:138737816-138737816|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2226135134697	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.233	1	79.534	79.034	80.034	0.30047								0	0	0	0.42693	1	33130	33130		2.2828	0.5405	1				16689	8054	7849	7887	19745	19745					0.12766899127996112
LAIRQPSVQ	9	Unmodified	_LAIRQPSVQ_					0	0	0			REV__ITGB3|p.P189Kfs*24|1|0.05|ENSG00000259207|chr17:47284645-47284646|-/AAAGGGACCAGGGCTTT|frameshift_variant	REV__ITGB3|p.P189Kfs*24|1|0.05|ENSG00000259207|chr17:47284645-47284646|-/AAAGGGACCAGGGCTTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3013488650322	2	506.300916	1010.58728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.024	1	81.315	80.815	81.815	0.29056								0	0	0	0.40188	1	33872	33872		8.5933	0	1		+		16690	11980	7850	7888	19746	19746					0.0824085157147465
LAISGDSYR	9	Unmodified	_LAISGDSYR_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2563354372978	2	491.253631	980.49271	2.347	0.001153	2.5935	0.0012741	4.9405	0.002427	491.2554373642322	39.878	0.36377	40.19	39.986	40.35	0.31263					27	11	3	0	0	0	0.10993	1	16782	16782		46.021	1.6139	1	2151600	+		16691	10695	7851	7889	19747	19747					0.0016829302946916869
LAISGDSYR	9	Unmodified	_LAISGDSYR_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2556640505791	2	491.253631	980.49271	1.8881	0.00092756	2.6844	0.0013187	4.5725	0.0022463	491.25521626362143	38.724	0.42252	40.02	39.774	40.197	1.2961					36	13	3	0	0	0	0.083604	1	16238	16238		54.774	1.198	1	9326900	+		16692	10695	7851	7889	19748	19748					0.0016829302946916869
LAITADKIF	9	Unmodified	_LAITADKIF_					0	0	0		tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2977172732353	2	496.294768	990.574983	2.2101	0.0010969	0.14642	7.2667E-05	2.3565	0.0011695	496.29527369990745	45.422	0.42252	46.787	46.497	46.92	1.3653					15	12	2	0	0	0	0.30098	1	19034	19034		25.399	4.9457	1	629050			16693	17043	7852	7890	19749	19749					0.07931815108429419
LAIVPNVR	8	Unmodified	_LAIVPNVR_					0	0	0		ENSG00000121716|ENST00000609309|PILRB	ENSG00000121716|ENST00000609309|PILRB	ENSG00000121716|ENST00000609309|PILRB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2832214236259	2	441.281995	880.549437	1.4477	0.00063886	1.1564	0.0005103	2.6041	0.0011492	441.2824586201504	43.34	0.43386	43.34	43.057	43.491	0					23	13	2	0	0	0	0.82039	1	18095	18095		19.439	0	1	1074200			16694	2137	7853	7891	19750	19750					0.10438385376653514
LAIWLLILL	9	Unmodified	_LAIWLLILL_					0	0	0		nc|ENSG00000164251|P55085|F2RL1;ENSG00000164251|ENST00000296677|F2RL1	nc|ENSG00000164251|P55085|F2RL1	nc|ENSG00000164251|P55085|F2RL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1068.556201159954	1	1067.72272	1066.71544	1.5197	0.0016226	0.99909	0.0010667	2.5188	0.0026893	1067.72203581595	53.534	0.25081	54.934	54.821	55.072	1.4005					16	10	2	0	0	0	0.11898	1	22401	22401		0.6015	0	1	3985600			16695	3764	7854	7892	19751	19751					0.18475018832646128
LAKAKRKH	8	Unmodified	_LAKAKRKH_					0	0	0			REV__nc|ENSG00000165490|Q8IXT1-2|DDIAS	REV__nc|ENSG00000165490|Q8IXT1-2|DDIAS	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1546813845634	3	317.878533	950.613768	0.020436	6.4961E-06	0.80194	0.00025492	0.82238	0.00026142	317.879044845414	22.17	0.44474	22.393	22.259	22.704	0.223					25	14	2	0	0	0	2.3239	1	9317	9317		0.45834	0	1	1399900	+		16696	10783	7855	7893	19752	19752					0.13648585253463352
LAKAKRKH	8	Unmodified	_LAKAKRKH_					0	0	0			REV__nc|ENSG00000165490|Q8IXT1-2|DDIAS	REV__nc|ENSG00000165490|Q8IXT1-2|DDIAS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.1548339724541	3	317.878533	950.613768	-0.22314	-7.0931E-05	1.7332	0.00055096	1.5101	0.00048002	317.87896406042455	20.716	0.53055	22.291	22.059	22.589	1.5748					22	17	2	0	0	0	2.3239	1	8724	8724		0.45834	0	1	981330	+		16697	10783	7855	7893	19753	19753					0.13648585253463352
LAKAWPTVL	9	Unmodified	_LAKAWPTVL_					0	0	0		ENST00000445430.5_1_3:195385024-195389463:+|nuORF;ENST00000427841.5_1_3:195712641-195717129:-|nuORF;ENST00000418868.5_1_3:197350234-197354776:-|nuORF;ENST00000502379.5_1_5:218428-224813:+|nuORF;SDHA|p.Q288Tfs*33|1|0.06|ENSG00000073578|chr5:230966-230967|-/A|frameshift_variant;ENST00000504824.5_1_5:218488-235547:+|nuORF;nc|ENSG00000073578|P31040-3|SDHA;nc|ENSG00000073578|P31040-2|SDHA;ENSG00000073578|ENST00000264932|SDHA;ENST00000505555.5_1_5:218470-251793:+|nuORF	ENST00000445430.5_1_3:195385024-195389463:+|nuORF	ENST00000445430.5_1_3:195385024-195389463:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3088256716728	2	499.805303	997.596052	2.7201	0.0013595	0.4523	0.00022606	3.1724	0.0015856	499.8053033004506	50.188	0.41218	51.579	51.355	51.767	1.3911					23	12	2	0	0	0	0.1388	1	21023	21023		39.95	11.776	1	2772900			16698	900	7856	7894	19754	19754					0.09715825207922535
LAKAWPTVL	9	Unmodified	_LAKAWPTVL_					0	0	0		ENST00000445430.5_1_3:195385024-195389463:+|nuORF;ENST00000427841.5_1_3:195712641-195717129:-|nuORF;ENST00000418868.5_1_3:197350234-197354776:-|nuORF;ENST00000502379.5_1_5:218428-224813:+|nuORF;SDHA|p.Q288Tfs*33|1|0.06|ENSG00000073578|chr5:230966-230967|-/A|frameshift_variant;ENST00000504824.5_1_5:218488-235547:+|nuORF;nc|ENSG00000073578|P31040-3|SDHA;nc|ENSG00000073578|P31040-2|SDHA;ENSG00000073578|ENST00000264932|SDHA;ENST00000505555.5_1_5:218470-251793:+|nuORF	ENST00000445430.5_1_3:195385024-195389463:+|nuORF	ENST00000445430.5_1_3:195385024-195389463:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.8065978884697	2	499.805303	997.596052	1.5031	0.00075124	1.438	0.00071871	2.941	0.0014699	500.3075582272626	49.591	0.47083	51.569	51.318	51.788	1.9772					27	14	2	0	0	0	0.15635	1	20802	20802		37.974	17.103	1	2439800			16699	900	7856	7894	19755	19755					0.09715825207922535
LAKEEERKKKK	11	Unmodified	_LAKEEERKKKK_					0	0	0		nc|ENSG00000073614|P29375-2|KDM5A;ENSG00000073614|ENST00000399788|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1471740603447	3	462.952426	1385.83545	4.3638	0.0020202	-1.0237	-0.00047393	3.3401	0.0015463	462.9517983326505	92.026	0.47191	92.962	92.706	93.178	0.93623					21	14	2	0	0	0	0.14606	1	38806	38806		0.50596	0	1	702470			16700	901	7857	7895	19756	19756					0.15796355368433979
LAKEEERKKKK	11	Unmodified	_LAKEEERKKKK_					0	0	0		nc|ENSG00000073614|P29375-2|KDM5A;ENSG00000073614|ENST00000399788|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1482421755791	3	462.952426	1385.83545	3.5508	0.0016439	-0.1741	-8.0602E-05	3.3767	0.0015633	462.95204170033486	91.642	0.38512	92.969	92.828	93.213	1.3269					18	11	2	0	0	0	0.14606	1	38613	38613		0.50596	0	1	562280			16701	901	7857	7895	19757	19757					0.15796355368433979
LAKEEHLI	8	Unmodified	_LAKEEHLI_					0	0	0		tr|A0A553SP20|A0A553SP20_NIACItRNA(guanine-N(1)-)-methyltransferaseOS=NialliacirculansOX=1397GN=trmDPE=3SV=1	tr|A0A553SP20|A0A553SP20_NIACItRNA(guanine-N(1)-)-methyltransferaseOS=NialliacirculansOX=1397GN=trmDPE=3SV=1	tr|A0A553SP20|A0A553SP20_NIACItRNA(guanine-N(1)-)-methyltransferaseOS=NialliacirculansOX=1397GN=trmDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2265197634697	2	476.776742	951.538931	1.5723	0.00074962	-0.56532	-0.00026953	1.0069	0.00048008	476.7765116078354	55.191	0.31328	56.6	56.449	56.763	1.4099					21	10	3	0	0	0	2.3239	1	23094	23094		9.3474	0	1	4624800			16702	16445	7858	7896	19758	19758					0.06122357931565148
LAKEWKNI	8	Unmodified	_LAKEWKNI_					0	0	0		ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2929260134697	2	501.292559	1000.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.736	1	66.736	66.236	67.236	0								0	0	0	1.0178	1	27796	27796		10.183	0.83596	1				16703	6508	7859	7897	19759	19759					0.07030350685522535
LAKEWKNI	8	Unmodified	_LAKEWKNI_					0	0	0		ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2926818728447	2	501.292559	1000.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.855	1	66.855	66.355	67.355	0								0	0	0	1.0178	1	27845	27845		10.183	0.83596	1				16704	6508	7859	7897	19760	19760					0.07030350685522535
LAKFLGIFFRW	11	Unmodified	_LAKFLGIFFRW_					0	0	0		tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6110107302666	3	466.607931	1396.80196	3.2842	0.0015324	0.027124	1.2656E-05	3.3113	0.0015451	466.6077737302514	87.191	1.6586	87.434	87.17	88.829	0.24387					94	55	3	0	0	0	1.0395	1	36846	36846		0.08335	0	1	5112000			16705	16803	7860	7898	19761	19761					0.11943398387211346
LAKKKKKKKLD	11	Unmodified	_LAKKKKKKKLD_					0	0	0		ENST00000377291.2_1_5:175110088-175110163:+|nuORF	ENST00000377291.2_1_5:175110088-175110163:+|nuORF	ENST00000377291.2_1_5:175110088-175110163:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	664.4639160037041	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.83	1	108.83	108.33	109.33	0								0	0	0	0.63775	1	46968	46968		1.1933	0.92432	1				16706	6196	7861	7899	19762	19762					0.25711314512841454
LAKLLEKP	8	Unmodified	_LAKLLEKP_					0	0	0			REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5377380251884	3	304.535661	910.585153	-0.086446	-2.6326E-05	3.729	0.0011356	3.6426	0.0011093	304.5369532135439	24.448	1.372	26.133	25.443	26.815	1.6845					84	45	3	0	0	0	0.89124	1	10178	10178		1.1933	0	1	9367600	+		16707	9672	7862	7900	19763	19763					0.1262842283365444
LAKLLEKP	8	Unmodified	_LAKLLEKP_					0	0	0			REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	REV__ENST00000493329.1_1_2:113951450-113953985:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.535661	910.585153	0.13579	4.1354E-05	4.1918	0.0012765	4.3276	0.0013179	304.5369744514315	24.716	1.0538	25.957	25.455	26.508	1.241	-0.087994	0.0001756	NaN	1.1933	62	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8642400	+		16708	9672	7862	7900							0.1262842283365444
LAKLVQERR	9	Unmodified	_LAKLVQERR_					0	0	0			REV__nc|ENSG00000138180|Q53EZ4-2|CEP55	REV__nc|ENSG00000138180|Q53EZ4-2|CEP55	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1012145876884	3	371.568135	1111.68258	2.4143	0.00089709	3.2004	0.0011892	5.6148	0.0020863	371.5691697943461	75.562	0.91234	77.344	76.699	77.611	1.7817					49	29	3	0	0	0	0.11901	1	31732	31732		2.7352	0.82882	1	994490	+		16709	10052	7863	7901	19764	19764					0.13120204762503818
LAKMERLL	8	Unmodified	_LAKMERLL_					0	0	0			REV__ENST00000514042.1_1_5:79368411-79378328:-|nuORF	REV__ENST00000514042.1_1_5:79368411-79378328:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	325.2017394900322	3	325.200284	972.579022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.93	1	103.09	102.59	103.59	0.16445								0	0	0	1.0178	1	43360	43360		1.8442	0	1		+		16710	13513	7864	7902	19765	19765					0.09163581330506076
LAKNIYSCLF	10	Unmodified	_LAKNIYSCLF_					0	0	0		MYO1A|p.R352C|1|0.28|ENSG00000166866|chr12:57043116-57043116|G/A|missense_variant	MYO1A|p.R352C|1|0.28|ENSG00000166866|chr12:57043116-57043116|G/A|missense_variant	MYO1A|p.R352C|1|0.28|ENSG00000166866|chr12:57043116-57043116|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3139526247978	2	586.312635	1170.61072	4.4025	0.0025812	-3.9048	-0.0022894	0.49767	0.00029179	586.3103300888164	89.572	0.38206	90.976	90.858	91.24	1.4045					22	11	3	0	0	0	0.81324	1	37799	37799		10.824	2.9138	1	1208600			16711	7804	7865	7903	19766	19766					0.03223529293768479
LAKNVLVIL	9	Unmodified	_LAKNVLVIL_					0	0	0			REV__ENST00000482643.1_1_9:99136327-99145916:-|nuORF	REV__ENST00000482643.1_1_9:99136327-99145916:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.3859435915947	2	491.836603	981.658653	3.0962	0.0015228	-0.31135	-0.00015313	2.7849	0.0013697	491.8364521491627	70.729	0.25505	72.083	71.906	72.161	1.3536					14	7	2	0	0	0	0.11819	1	29710	29710		8.5933	0	1	1320500	+		16712	9808	7866	7904	19767	19767					0.1670897127612534
LAKNVLVIL	9	Unmodified	_LAKNVLVIL_					0	0	0			REV__ENST00000482643.1_1_9:99136327-99145916:-|nuORF	REV__ENST00000482643.1_1_9:99136327-99145916:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	491.836603	981.658653	2.3792	0.0011702	-1.0516	-0.00051721	1.3276	0.00065297	491.8363826371503	70.167	0.32004	72.005	71.784	72.104	1.8378	-0.03887	-0.00023656	NaN	8.5933	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708560	+		16713	9808	7866	7904							0.1670897127612534
LAKQPGVSV	9	Unmodified	_LAKQPGVSV_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	449.7722045779228	2	449.77146	897.528367	0.62585	0.00028149	0.72129	0.00032442	1.3471	0.00060591	449.77168510259855	16.967	0.32593	17.865	17.758	18.083	0.89794					22	10	3	0	0	0	0.02878	1	7067	7067		89.401	38.546	1	1641600			16714	4652	7867	7905	19768	19768					0.07550375277151034
LAKQPGVSV	9	Unmodified	_LAKQPGVSV_					0	0	0		ENSG00000183421|ENST00000332512|RIPK4;nc|ENSG00000183421|P57078|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	449.7718078494072	2	449.77146	897.528367	0.45872	0.00020632	0.29159	0.00013115	0.75031	0.00033747	449.7714389990854	16.775	0.29528	18.077	17.939	18.234	1.3023					20	9	3	0	0	0	0.086433	1	6981	6981		53.833	15.682	1	1787100			16715	4652	7867	7905	19769	19769					0.07550375277151034
LAKRIQQR	8	Unmodified	_LAKRIQQR_					0	0	0			REV__ENSG00000135519|ENST00000257981|KCNH3	REV__ENSG00000135519|ENST00000257981|KCNH3	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2166625857353	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.104	1	71.104	70.604	71.604	0								0	0	0	1.0178	1	29614	29614		1.6526	0	1		+		16716	9945	7868	7906	19770	19770					0.12479666419562818
LAKRRLVL	8	Unmodified	_LAKRRLVL_					0	0	0			REV__ENST00000543042.5_1_11:72091398-72145518:-|nuORF	REV__ENST00000543042.5_1_11:72091398-72145518:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	485.3119994997978	2	484.840011	967.665469	3.5121	0.0017028	-2.1546	-0.0010446	1.3576	0.0006582	484.8384757894565	107.42	0.12611	107.47	107.39	107.52	0.052452					9	5	2	0	0	0	2.3239	1	45939	45939		2.5775	0	1	3893200	+		16717	10634	7869	7907	19771	19771					0.1803432894735124
LAKRRLVL	8	Unmodified	_LAKRRLVL_					0	0	0			REV__ENST00000543042.5_1_11:72091398-72145518:-|nuORF	REV__ENST00000543042.5_1_11:72091398-72145518:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	484.840011	967.665469	1.2896	0.00062527	-0.19565	-9.4857E-05	1.094	0.00053042	484.8397597550896	107.48	0.12045	107.48	107.39	107.51	0	0.0047738	0.00082555	NaN	2.5775	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3071200	+		16718	10634	7869	7907							0.1803432894735124
LAKYGIEPV	9	Unmodified	_LAKYGIEPV_					0	0	0		tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2860290408134	2	495.286943	988.559333	0.70777	0.00035055	-3.0168	-0.0014942	-2.309	-0.0011436	495.28517086185343	31.257	0.28172	32.538	32.343	32.625	1.2813					14	8	2	0	0	0	0.46905	1	13084	13084		16.942	1.0951	1	909040			16719	16598	7870	7908	19772	19772					0.0645952859136969
LAKYGIEPV	9	Unmodified	_LAKYGIEPV_					0	0	0		tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	tr|A0A553SS96|A0A553SS96_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_02680PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	495.286943	988.559333	0.85143	0.0004217	-3.1987	-0.0015843	-2.3473	-0.0011626	495.2852086387128	30.69	0.19886	32.505	32.419	32.618	1.8151	-0.069896	2.9206E-05	NaN	16.942	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	771610			16720	16598	7870	7908							0.0645952859136969
LALAGALAVL	10	Unmodified	_LALAGALAVL_					0	0	0		nc|ENSG00000125731|Q9BRG2-2|SH2D3A;ENSG00000125731|ENST00000245908|SH2D3A	nc|ENSG00000125731|Q9BRG2-2|SH2D3A	nc|ENSG00000125731|Q9BRG2-2|SH2D3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3025085330009	2	456.299853	910.585153	2.5382	0.0011582	0.35503	0.000162	2.8932	0.0013202	456.3001645163221	41.023	0.37744	42.349	42.178	42.556	1.3254					24	11	3	0	0	0	0.41992	2	17177	17177;17230		32.117	0	1	1003400			16721	2273	7871	7909	19773;19774	19773					0.1262842283365444
LALAGALAVL	10	Unmodified	_LALAGALAVL_					0	0	0		nc|ENSG00000125731|Q9BRG2-2|SH2D3A;ENSG00000125731|ENST00000245908|SH2D3A	nc|ENSG00000125731|Q9BRG2-2|SH2D3A	nc|ENSG00000125731|Q9BRG2-2|SH2D3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3005554080009	2	456.299853	910.585153	2.3658	0.0010795	-0.10354	-4.7245E-05	2.2623	0.0010323	456.2997938141755	40.62	0.31538	42.483	42.296	42.611	1.8624					16	9	2	0	0	0	0.41992	1	17046	17046		32.117	3.6301	1	971240			16722	2273	7871	7909	19775	19775					0.1262842283365444
LALAGPRR	8	Unmodified	_LALAGPRR_					0	0	0			REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2751342654228	2	427.271961	852.52937	3.9675	0.0016952	0.36156	0.00015449	4.3291	0.0018497	427.2720672646066	95.954	0.28887	96.376	96.22	96.509	0.4212					14	9	2	0	0	0	0.89008	1	40370	40370		2.5775	0	1	1606200	+		16723	13636	7872	7910	19776	19776					0.09720634436712317
LALAGPRR	8	Unmodified	_LALAGPRR_					0	0	0			REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	427.271961	852.52937	3.9675	0.0016952	0.36156	0.00015449	4.3291	0.0018497	427.2720672646066	95.954	0.28887	96.376	96.22	96.509	0.4212	0.16723	0.00032498	NaN	2.5775	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1606200	+		16724	13636	7872	7910							0.09720634436712317
LALAGPRR	8	Unmodified	_LALAGPRR_					0	0	0			REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	REV__ENST00000522315.5_1_8:22422665-22422716:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	427.271961	852.52937	3.2882	0.001405	-0.23986	-0.00010249	3.0483	0.0013025	427.2717288008867	95.639	0.27216	96.041	95.903	96.175	0.40208	-0.16723	-0.00018896	NaN	2.5775	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1579300	+		16725	13636	7872	7910							0.09720634436712317
LALCKKPLKPV	11	Unmodified	_LALCKKPLKPV_					0	0	0			REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1994506716728	4	303.199248	1208.76789	0.54996	0.00016675	-0.29595	-8.9733E-05	0.25401	7.7016E-05	303.19913081222427	32.184	0.80636	32.478	31.999	32.805	0.29431					87	25	4	0	0	0	1.0391	1	13436	13436		0.40827	0.24894	1	6378000	+		16726	14476	7873	7911	19777	19777					0.17185233903933295
LALCKKPLKPV	11	Unmodified	_LALCKKPLKPV_					0	0	0			REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	REV__nc|ENSG00000164893|Q8TCU3-2|SLC7A13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1991760134697	4	303.199248	1208.76789	-0.51729	-0.00015684	0.17488	5.3024E-05	-0.34241	-0.00010382	303.1992700376234	31.109	1.0006	32.39	31.624	32.625	1.2813					104	31	4	0	0	0	1.0362	1	13015	13015		1.3296	0.70282	1	6480500	+		16727	14476	7873	7911	19778	19778					0.17185233903933295
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2404968142509	3	396.239573	1185.69689	1.7346	0.00068733	0.51641	0.00020462	2.251	0.00089195	396.2401691637955	40.242	0.31476	40.555	40.35	40.665	0.31263					23	9	3	0	0	0	0.5355	1	16891	16891		23.016	7.4772	1	3158200	+		16728	14379	7874	7912	19779	19779					0.1114681240014761
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2393066287041	3	396.239573	1185.69689	1.3942	0.00055246	-0.73259	-0.00029028	0.66165	0.00026217	396.23938295377644	38.792	0.30174	40.088	39.895	40.197	1.2961					22	9	3	0	0	0	0.20152	1	16243	16243		39.923	15.959	1	5213700	+		16729	14379	7874	7912	19780	19780					0.1114681240014761
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2395507693291	3	396.239573	1185.69689	0.80965	0.00032081	-0.12717	-5.0388E-05	0.68248	0.00027043	396.23972202349523	38.142	0.34266	39.962	39.788	40.131	1.8202					25	10	3	0	0	0	0.79576	1	16045	16045		15.538	3.9071	1	3927600	+		16730	14379	7874	7912	19781	19781					0.1114681240014761
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	396.239573	1185.69689	0.066608	2.6393E-05	2.114	0.00083764	2.1806	0.00086404	396.24061318812386	40.746	0.31028	40.746	40.549	40.859	0	0.095642	0.0010212	NaN	23.016	26	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2375100	+		16731	14379	7874	7912							0.1114681240014761
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	396.239573	1185.69689	1.7346	0.00068733	0.51641	0.00020462	2.251	0.00089195	396.2401691637955	40.242	0.31476	40.555	40.35	40.665	0.31263	-0.095642	-0.00087786	NaN	23.016	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3158200	+		16732	14379	7874	7912							0.1114681240014761
LALDLSGEKKI	11	Unmodified	_LALDLSGEKKI_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	396.239573	1185.69689	1.3942	0.00055246	-0.73259	-0.00029028	0.66165	0.00026217	396.23938295377644	38.792	0.30174	40.088	39.895	40.197	1.2961	0.062904	-0.0003528	NaN	39.923	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5213700	+		16733	14379	7874	7912							0.1114681240014761
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7823669314384	2	491.782025	981.549496	1.5	0.00073767	-0.40491	-0.00019913	1.0951	0.00053855	491.78195683748373	66.528	0.38601	66.528	66.285	66.671	0					19	11	2	0	0	0	0.34572	1	27717	27717		23.148	0	1	1391300	+		16734	10140	7875	7913	19782	19782					0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7831909060478	2	491.782025	981.549496	2.6172	0.0012871	-1.0335	-0.00050827	1.5837	0.00077884	491.7816139064399	66.123	0.38243	66.447	66.24	66.622	0.32449					20	11	2	0	0	0	0.20671	1	27689	27689		32.305	5.4218	1	1485300	+		16735	10140	7875	7913	19783	19783					0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7832519412041	2	491.782025	981.549496	3.1093	0.0015291	-0.26881	-0.00013219	2.8405	0.0013969	491.78192115924435	64.997	0.44045	66.396	66.131	66.571	1.3989					25	13	2	0	0	0	0.059546	1	27215	27215		64.236	6.765	1	5046100	+		16736	10140	7875	7913	19784	19784					0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7832824587822	2	491.782025	981.549496	2.3181	0.00114	0.25912	0.00012743	2.5772	0.0012674	491.7822426752661	64.51	0.47652	66.438	66.17	66.647	1.928					27	14	2	0	0	0	0.13873	1	27020	27020		39.957	5.8549	1	4620400	+		16737	10140	7875	7913	19785	19785					0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	491.782025	981.549496	2.6172	0.0012871	-1.0335	-0.00050827	1.5837	0.00077884	491.7816139064399	66.123	0.38243	66.447	66.24	66.622	0.32449	-0.0050234	-0.00064677	NaN	64.236	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1485300	+		16738	10140	7875	7913							0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.782025	981.549496	3.1093	0.0015291	-0.26881	-0.00013219	2.8405	0.0013969	491.78192115924435	64.997	0.44045	66.396	66.131	66.571	1.3989	-0.056634	0.00010537	NaN	64.236	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5046100	+		16739	10140	7875	7913							0.05798340585988626
LALDPNQLV	9	Unmodified	_LALDPNQLV_					0	0	0			REV__nc|ENSG00000141367|Q00610-2|CLTC	REV__nc|ENSG00000141367|Q00610-2|CLTC	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.782025	981.549496	2.3181	0.00114	0.25912	0.00012743	2.5772	0.0012674	491.7822426752661	64.51	0.47652	66.438	66.17	66.647	1.928	-0.014069	0.00062462	NaN	64.236	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4620400	+		16740	10140	7875	7913							0.05798340585988626
LALGAVKN	8	Unmodified	_LALGAVKN_					0	0	0		ENST00000461533.1_1_3:37725371-37774349:+|nuORF;ITGA9|p.V741Gfs*12|1|0.08|ENSG00000144668|chr3:37736969-37736970|-/G|frameshift_variant;ITGA9|p.T742Lfs*28|1|0.06|ENSG00000144668|chr3:37736971-37736972|-/GTTGCAAATATTAGACCATTGCC|frameshift_variant;ENSG00000144668|ENST00000264741|ITGA9	ENST00000461533.1_1_3:37725371-37774349:+|nuORF	ENST00000461533.1_1_3:37725371-37774349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2515746951103	2	393.247621	784.480688	4.9463	0.0019451	2.9525	0.0011611	7.8988	0.0031062	393.2486735624367	89.176	0.38679	90.196	90.01	90.397	1.0199					21	11	2	0	0	0	0.89008	1	37604	37604		2.5775	0	1	805830			16741	3087	7876	7914	19786	19786					0.0798272107693947
LALGAVKN	8	Unmodified	_LALGAVKN_					0	0	0		ENST00000461533.1_1_3:37725371-37774349:+|nuORF;ITGA9|p.V741Gfs*12|1|0.08|ENSG00000144668|chr3:37736969-37736970|-/G|frameshift_variant;ITGA9|p.T742Lfs*28|1|0.06|ENSG00000144668|chr3:37736971-37736972|-/GTTGCAAATATTAGACCATTGCC|frameshift_variant;ENSG00000144668|ENST00000264741|ITGA9	ENST00000461533.1_1_3:37725371-37774349:+|nuORF	ENST00000461533.1_1_3:37725371-37774349:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	393.247621	784.480688	4.4994	0.0017694	4.1332	0.0016254	8.6326	0.0033947	393.24926044241255	88.682	0.35451	90.129	89.889	90.243	1.4467	-0.033561	0.00047792	NaN	2.5775	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	782020			16742	3087	7876	7914							0.0798272107693947
LALGVQWAI	9	Unmodified	_LALGVQWAI_					0	0	0		nc|ENSG00000188672|P18577-13|RHCE;nc|ENSG00000188672|P18577-12|RHCE;ENSG00000187010|ENST00000328664|RHD;ENSG00000188672|ENST00000294413|RHCE;nc|ENSG00000187010|Q02161-5|RHD;ENST00000527187.5_1_1:25712128-25747316:-|nuORF;ENST00000564398.5_1_1:25598999-25633293:+|nuORF;nc|ENSG00000188672|P18577-6|RHCE;nc|ENSG00000187010|Q02161-6|RHD;nc|ENSG00000188672|P18577-5|RHCE;nc|ENSG00000188672|P18577-2|RHCE;nc|ENSG00000188672|P18577-11|RHCE;nc|ENSG00000187010|Q02161-2|RHD;nc|ENSG00000188672|P18577-7|RHCE;nc|ENSG00000187010|Q02161-3|RHD;nc|ENSG00000188672|P18577-10|RHCE;nc|ENSG00000188672|P18577-8|RHCE;nc|ENSG00000188672|P18577-3|RHCE;nc|ENSG00000188672|P18577-4|RHCE;nc|ENSG00000188672|P18577-9|RHCE;nc|ENSG00000188672|P18577-14|RHCE;nc|ENSG00000187010|Q02161-4|RHD	nc|ENSG00000188672|P18577-13|RHCE	nc|ENSG00000188672|P18577-13|RHCE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	485.2580749392509	2	485.789653	969.564752	2.1257	0.0010326	-1.5877	-0.00077128	0.53797	0.00026134	485.7888536656814	41.897	0.24097	43.237	43.141	43.382	1.3399					11	7	2	0	0	0	0.094078	1	17577	17577		18.135	3.5533	1	387100			16743	4814	7877	7915	19787	19787					0.07875252173846548
LALHEDKV	8	Unmodified	_LALHEDKV_					0	0	0		ENST00000566568.1_1_16:31121058-31121856:+|nuORF	ENST00000566568.1_1_16:31121058-31121856:+|nuORF	ENST00000566568.1_1_16:31121058-31121856:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1463195681572	2	462.761092	923.507631	1.6007	0.00074074	-0.3549	-0.00016423	1.2458	0.00057651	462.7607770272778	31.805	0.19395	31.805	31.66	31.854	0					8	5	2	0	0	0	2.3239	1	13317	13317		6.3541	0	1	401600			16744	7363	7878	7916	19788	19788					0.04281784897466423
LALIIYLV	8	Unmodified	_LALIIYLV_					0	0	0		tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1731750369072	2	459.307147	916.599741	2.6455	0.0012151	-4.1688	-0.0019148	-1.5233	-0.00069967	459.30469803159343	85.123	0.16084	85.123	85.036	85.196	0					6	4	2	0	0	0	2.3239	1	35476	35476		0	0	1	326840			16745	16246	7879	7917	19789	19789					0.13810494981782995
LALIIYLV	8	Unmodified	_LALIIYLV_					0	0	0		tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	459.307147	916.599741	3.1525	0.001448	-4.4477	-0.0020429	-1.2952	-0.00059489	459.3050111833833	84.617	0.12848	84.878	84.79	84.919	0.26083	-0.03429	-0.00039423	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229370			16746	16246	7879	7917							0.13810494981782995
LALIIYLV	8	Unmodified	_LALIIYLV_					0	0	0		tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	459.307147	916.599741	1.8011	0.00082728	-3.8647	-0.0017751	-2.0636	-0.00094782	459.3053538672161	83.655	0.28226	84.843	84.704	84.987	1.1879	-0.069729	0.0001413	NaN	0	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1215200			16747	16246	7879	7917							0.13810494981782995
LALIIYLVIKK	11	Unmodified	_LALIIYLVIKK_					0	0	0		tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1287.068164050579	1	1286.88101	1285.87373	2.682	0.0034514	-0.62663	-0.0008064	2.0553	0.002645	1286.8832777312282	37.063	0.12378	37.368	37.323	37.447	0.30497					5	4	2	0	0	0	0.14606	1	15592	15592		0	0	1	899520			16748	16246	7880	7918	19790	19790					0.24222893021033087
LALIIYLVIKK	11	Unmodified	_LALIIYLVIKK_					0	0	0		tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	tr|A0A553SJE9|A0A553SJE9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16580PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1286.88101	1285.87373	-0.15742	-0.00020258	2.9146	0.0037507	2.7571	0.0035481	1286.8891861047957	35.97	0.12122	37.247	37.207	37.328	1.2762	-0.060587	0.0026795	NaN	0	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1075100			16749	16246	7880	7918							0.24222893021033087
LALKLAPLPK	10	Unmodified	_LALKLAPLPK_					0	0	0			REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	REV__nc|ENSG00000135766|Q9GZT9-3|EGLN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	355.2460204958916	3	355.24611	1062.7165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.74	1	103.8	103.3	104.3	0.059502								0	0	0	0.66264	1	43593	43593		0	0	1		+		16750	9955	7881	7919	19791	19791					0.18765233201543197
LALLDAGVP	9	Unmodified	_LALLDAGVP_					0	0	0		tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7639953494072	2	434.760561	867.506569	4.2175	0.0018336	2.2071	0.00095955	6.4245	0.0027931	434.7617354365751	87.097	0.56007	88.189	87.899	88.459	1.0918					46	18	3	0	0	0	0.7849	1	36718	36718		3.9444	0	1	3952300			16751	17046	7882	7920	19792	19792					0.06751570528570028
LALLDAGVP	9	Unmodified	_LALLDAGVP_					0	0	0		tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	434.760561	867.506569	1.9377	0.00084246	3.6515	0.0015875	5.5892	0.00243	434.7621702676931	88.481	0.42502	88.481	88.243	88.668	0	0.10119	0.00023735	NaN	3.9444	36	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8154200			16752	17046	7882	7920							0.06751570528570028
LALLDAGVP	9	Unmodified	_LALLDAGVP_					0	0	0		tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	tr|A0A7D6W3P5|A0A7D6W3P5_9CLOTPolyribonucleotidenucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=pnpPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	434.760561	867.506569	3.0093	0.0013083	3.7785	0.0016427	6.7878	0.0029511	434.7622592681867	88.236	0.55995	88.47	88.163	88.723	0.2347	0.090395	0.00034783	NaN	3.9444	44	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5345100			16753	17046	7882	7920							0.06751570528570028
LALLEKKL	8	Unmodified	_LALLEKKL_					0	0	0			REV__ENSG00000167880|ENST00000301607|EVPL	REV__ENSG00000167880|ENST00000301607|EVPL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	464.1454040408134	2	464.315503	926.616454	2.259	0.0010489	0.52297	0.00024282	2.7819	0.0012917	464.3158575203024	58.496	0.25873	58.496	58.331	58.59	0					11	7	2	0	0	0	2.3239	1	24437	24437		2.8892	0	1	396430	+		16754	10883	7883	7921	19793	19793					0.15020995867757847
LALLSEIAAA	10	Unmodified	_LALLSEIAAA_					0	0	0		ENST00000555474.5_1_14:67804796-67804970:-|nuORF	ENST00000555474.5_1_14:67804796-67804970:-|nuORF	ENST00000555474.5_1_14:67804796-67804970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	971.5793945193291	1	971.577174	970.569897	1.8199	0.0017681	-0.43376	-0.00042143	1.3861	0.0013467	971.576188943752	75.581	0.38068	75.581	75.374	75.755	0					25	11	3	0	0	0	0.25611	1	31496	31496		42.095	2.1449	1	2186400			16755	7296	7884	7922	19794	19794					0.08343511245800528
LALLYWVL	8	Unmodified	_LALLYWVL_					0	0	0		ENST00000313368.7_1_5:140698470-140698509:-|nuORF	ENST00000313368.7_1_5:140698470-140698509:-|nuORF	ENST00000313368.7_1_5:140698470-140698509:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8055602908134	2	495.804771	989.59499	1.4597	0.00072372	2.5734	0.0012759	4.0331	0.0019996	495.80562942924104	73.689	0.49188	73.689	73.491	73.983	0					31	15	3	0	0	0	0.87655	1	30631	30631		11.114	0	1	2282700			16756	5813	7885	7923	19795	19795					0.09977610839030149
LALMRLKR	8	Unmodified	_LALMRLKR_					0	0	0			REV__ENST00000596769.1_1_19:53510963-53514048:+|nuORF	REV__ENST00000596769.1_1_19:53510963-53514048:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	500.2960998415947	2	500.826047	999.63754	2.5061	0.0012551	-2.4248	-0.0012144	0.081377	4.0756E-05	501.32629759304325	66.111	0.22309	66.436	66.272	66.495	0.32449					9	6	2	0	0	0	2.3239	1	27678	27678		6.3541	0	1	444610	+		16757	14094	7886	7924	19796	19796					0.13770682695621872
LALNSLLTF	9	Unmodified	_LALNSLLTF_					0	0	0		ENST00000463077.5_1_3:149459310-149470177:-|nuORF	ENST00000463077.5_1_3:149459310-149470177:-|nuORF	ENST00000463077.5_1_3:149459310-149470177:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2975646853447	2	496.294768	990.574983	1.8255	0.000906	1.1719	0.00058163	2.9975	0.0014876	496.29558151412516	44.943	0.28701	46.902	46.703	46.99	1.9596					13	8	2	0	0	0	0.39927	1	18818	18818		20.454	3.5113	1	545500			16758	6683	7887	7925	19797	19797					0.07931815108429419
LALPEPPITI	10	Unmodified	_LALPEPPITI_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3246948122978	2	532.323525	1062.6325	2.9603	0.0015758	-0.87663	-0.00046665	2.0836	0.0011092	532.323218533462	61.89	0.31395	63.308	63.145	63.459	1.4177					21	9	3	0	0	0	0.04351	1	25940	25940		81.613	2.885	1	3108500	+		16759	11501	7888	7926	19798	19798					0.10368657313983931
LALPEPPITI	10	Unmodified	_LALPEPPITI_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	532.323525	1062.6325	2.0017	0.0010655	1.5819	0.00084206	3.5835	0.0019076	532.3243872262925	63.097	0.31219	63.427	63.287	63.599	0.32974	0.1069	0.0011564	NaN	81.613	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740470	+		16760	11501	7888	7926							0.10368657313983931
LALPEPPITI	10	Unmodified	_LALPEPPITI_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	532.323525	1062.6325	2.9603	0.0015758	-0.87663	-0.00046665	2.0836	0.0011092	532.323218533462	61.89	0.31395	63.308	63.145	63.459	1.4177	-0.011759	-0.001461	NaN	81.613	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3108500	+		16761	11501	7888	7926							0.10368657313983931
LALPFLVPVP	10	Unmodified	_LALPFLVPVP_					0	0	0			REV__ENST00000461395.5_1_2:220378960-220396865:+|nuORF	REV__ENST00000461395.5_1_2:220378960-220396865:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1921874880791	2	533.338978	1064.6634	1.9178	0.0010228	-0.50444	-0.00026904	1.4134	0.00075381	533.339212126953	93.324	0.1582	93.324	93.202	93.36	0					6	4	2	0	0	0	0.12555	1	38985	38985		0	0	1	180650	+		16762	13197	7889	7927	19799	19799					0.133658554188969
LALPRALQ	8	Unmodified	_LALPRALQ_					0	0	0		ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2834960818291	2	441.281995	880.549437	1.4477	0.00063886	1.1564	0.0005103	2.6041	0.0011492	441.2824586201504	43.34	0.43386	43.34	43.057	43.491	0					23	13	2	0	0	0	0.76103	1	18145	18145		24.674	5.2349	1	1074200			16763	7525	7890	7928	19800	19800					0.10438385376642145
LALPRALQ	8	Unmodified	_LALPRALQ_					0	0	0		ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.2818786501884	2	441.281995	880.549437	2.248	0.00099199	-1.0202	-0.00045019	1.2278	0.00054179	441.28134941447854	42.851	0.3151	43.171	42.911	43.226	0.32058					20	10	2	0	0	0	0.77833	2	17953	17953;18011		23.148	5.0134	1	955790			16764	7525	7890	7928	19801;19802	19801					0.10438385376642145
LALPRALQ	8	Unmodified	_LALPRALQ_					0	0	0		ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2819702029228	2	441.281995	880.549437	2.5569	0.0011283	-1.1636	-0.00051349	1.3932	0.0006148	441.2812137255309	41.185	0.53616	42.511	42.178	42.715	1.3254					35	16	3	0	0	0	0.7006	2	17229	17229;17330		30.225	3.8835	1	2231800			16765	7525	7890	7928	19803;19804	19803					0.10438385376642145
LALPRALQ	8	Unmodified	_LALPRALQ_					0	0	0		ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	ENST00000597244.1_1_19:16688850-16689066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2817565798759	2	441.281995	880.549437	2.216	0.00097786	-0.6455	-0.00028485	1.5705	0.00069301	441.2816119368647	40.796	0.5062	42.689	42.358	42.864	1.8927					34	15	3	0	0	0	0.7006	1	17119	17119		30.225	5.5509	1	2250400			16766	7525	7890	7928	19805	19805					0.10438385376642145
LALPVRARL	9	Unmodified	_LALPVRARL_					0	0	0			REV__ENST00000446587.2_1_12:66524292-66524445:-|nuORF	REV__ENST00000446587.2_1_12:66524292-66524445:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8946411013603	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.86	1	116.01	115.51	116.51	0.15228								0	0	0	0.42693	1	50085	50085		0.26902	0	1		+		16767	13108	7891	7929	19806	19806					0.15686025084733046
LALPVRARL	9	Unmodified	_LALPVRARL_					0	0	0			REV__ENST00000446587.2_1_12:66524292-66524445:-|nuORF	REV__ENST00000446587.2_1_12:66524292-66524445:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8942748904228	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.56	1	117.71	117.21	118.21	0.15606								0	0	0	0.42693	1	50774	50774		0.26902	0	1		+		16768	13108	7891	7929	19807	19807					0.15686025084733046
LALQNPEVV	9	Unmodified	_LALQNPEVV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant;nc|ENSG00000164327|Q6R327-4|RICTOR;ENST00000513566.1_1_5:38981926-39074494:-|nuORF;ENST00000510711.5_1_5:38971963-39074479:-|nuORF	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7812072634697	2	491.782025	981.549496	1.5	0.00073767	-0.40491	-0.00019913	1.0951	0.00053855	491.78195683748373	66.528	0.38601	66.528	66.285	66.671	0					19	11	2	0	0	0	0.44535	1	27666	27666		18.135	0	1	1391300			16769	3772	7892	7930	19808	19808					0.05798340585988626
LALQWRPL	8	Unmodified	_LALQWRPL_					0	0	0			REV__ENSG00000154174|ENST00000284320|TOMM70	REV__ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.8048889040947	2	498.803094	995.591636	1.5369	0.00076661	2.0121	0.0010037	3.549	0.0017703	498.8040451178272	40.846	0.44687	40.846	40.698	41.145	0					43	13	4	0	0	0	0.88504	1	17201	17201		5.7604	0	1	9971900	+		16770	10462	7893	7931	19809	19809					0.09366360785031702
LALQWRPL	8	Unmodified	_LALQWRPL_					0	0	0			REV__ENSG00000154174|ENST00000284320|TOMM70	REV__ENSG00000154174|ENST00000284320|TOMM70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8046142458916	2	498.803094	995.591636	1.853	0.00092428	0.85334	0.00042565	2.7063	0.0013499	498.80350703189697	38.778	0.3592	40.075	39.805	40.164	1.2961					31	11	3	0	0	0	0.88504	1	16265	16265		5.7604	0	1	7443300	+		16771	10462	7893	7931	19810	19810					0.09366360785031702
LALRLQEAE	9	Unmodified	_LALRLQEAE_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2014037966728	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.453	1	27.724	27.224	28.224	1.2715								0	0	0	0.42693	1	11077	11077		2.7352	0.82882	1				16772	983	7894	7932	19811	19811					0.06273127989015848
LALRLQEAE	9	Unmodified	_LALRLQEAE_					0	0	0		ENSG00000078814|ENST00000262873|MYH7B;nc|ENSG00000078814|A7E2Y1|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	ENSG00000078814|ENST00000262873|MYH7B	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2019531130791	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.025	1	27.742	27.242	28.242	1.7167								0	0	0	0.42693	1	10883	10883		2.7352	0.45242	1				16773	983	7894	7932	19812	19812					0.06273127989015848
LALSGRAPSI	10	Unmodified	_LALSGRAPSI_					0	0	0		nc|ENSG00000171671|Q9BTD1|SHANK2-AS3	nc|ENSG00000171671|Q9BTD1|SHANK2-AS3	nc|ENSG00000171671|Q9BTD1|SHANK2-AS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7975036501884	2	492.795466	983.57638	2.4081	0.0011867	-0.20323	-0.00010015	2.2048	0.0010865	492.7954818132128	48.939	0.37547	49.269	49.039	49.414	0.3302					29	11	3	0	0	0	0.35292	1	20458	20458		36.127	9.2434	1	5152000			16774	7928	7895	7933	19813	19813					0.08393449197160407
LALSRRRCRPV	11	Unmodified	_LALSRRRCRPV_					0	0	0		ENST00000289166.5_1_1:27339207-27339312:-|nuORF	ENST00000289166.5_1_1:27339207-27339312:-|nuORF	ENST00000289166.5_1_1:27339207-27339312:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8993408083916	2	663.898597	1325.78264	2.0653	0.0013711	-3.9905	-0.0026493	-1.9253	-0.0012782	663.8966736139787	81.887	0.82903	82.167	81.906	82.735	0.2802					48	26	2	0	0	0	1.0357	1	34299	34299		1.4819	0.15237	1	1327400			16775	5720	7896	7934	19814	19814					0.13278118824655394
LALVDGQPKV	10	Unmodified	_LALVDGQPKV_					0	0	0		tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.3114501833916	2	520.310949	1038.60735	2.1284	0.0011074	-1.5921	-0.0008284	0.53623	0.000279	520.3097896901037	55.48	0.43894	55.48	55.243	55.682	0					38	16	3	0	0	0	0.67383	1	23170	23170		22.736	0	1	4655200			16776	16157	7897	7935	19815	19815					0.08958602511415847
LALVDGQPKV	10	Unmodified	_LALVDGQPKV_					0	0	0		tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.3102294802666	2	520.310949	1038.60735	2.1741	0.0011312	-1.7935	-0.0009332	0.38058	0.00019802	520.309792028562	54.937	0.49564	55.258	54.936	55.432	0.32088					41	17	3	0	0	0	0.55892	1	23040	23040		29.082	0	1	4937200			16777	16157	7897	7935	19816	19816					0.08958602511415847
LALVDGQPKV	10	Unmodified	_LALVDGQPKV_					0	0	0		tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3069946169853	2	520.310949	1038.60735	1.2804	0.00066619	-2.1087	-0.0010972	-0.82829	-0.00043097	520.3096099390854	53.687	0.50824	55.088	54.778	55.286	1.4005					52	21	3	0	0	0	0.46469	1	22531	22531		27.629	4.4804	1	16376000			16778	16157	7897	7935	19817	19817					0.08958602511415847
LALVDGQPKV	10	Unmodified	_LALVDGQPKV_					0	0	0		tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	tr|A0A553SHK8|A0A553SHK8_NIACIDNAgyrasesubunitAOS=NialliacirculansOX=1397GN=gyrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3096191287041	2	520.310949	1038.60735	0.79671	0.00041454	-2.1481	-0.0011177	-1.3514	-0.00070312	520.3096209763826	53.081	0.50118	55.051	54.793	55.295	1.9697					64	26	3	0	0	0	0.55892	2	22185	22185;22312		29.082	1.3607	1	14616000			16779	16157	7897	7935	19818;19819	19818					0.08958602511415847
LALVVVLPWR	10	Unmodified	_LALVVVLPWR_					0	0	0		ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	ENST00000554467.5_1_12:57625133-57626138:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3779785037041	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.491	1	29.266	28.766	29.766	1.7754								0	0	0	0.6617	1	11506	11506		3.2813	0	1				16780	7290	7898	7936	19820	19820					0.16252037950107479
LALWRPNL	8	Unmodified	_LALWRPNL_					0	0	0			REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2002136111259	3	328.199272	981.575986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.442	1	41.442	40.942	41.942	0								0	0	0	1.0178	1	17351	17351		1.4819	0	1		+		16781	15397	7899	7937	19821	19821					0.08446074267976655
LALWRPNL	8	Unmodified	_LALWRPNL_					0	0	0			REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	REV__tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1990539431572	3	328.199272	981.575986	0.68792	0.00022577	1.1276	0.00037008	1.8155	0.00059585	328.19957558819067	33.324	1.3482	33.621	33.307	34.656	0.29701					126	44	5	0	0	0	0.89051	1	13880	13880		1.4819	0	1	81250000	+		16782	15397	7899	7937	19822	19822					0.08446074267976655
LALYYRGCL	9	Unmodified	_LALYYRGCL_					0	0	0		ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.2871581912041	2	536.28642	1070.55829	1.1535	0.00061859	-0.86192	-0.00046224	0.29155	0.00015635	536.285255643062	99.366	0.090225	99.366	99.319	99.409	0					4	2	2	0	0	0	0.24063	1	41597	41597		28.487	3.0875	1	1840900			16783	2896	7900	7938	19823	19823					0.025829909508274795
LAMKRFRP	8	Unmodified	_LAMKRFRP_					0	0	0			REV__ENST00000485386.1_1_15:80191454-80215979:-|nuORF	REV__ENST00000485386.1_1_15:80191454-80215979:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8067809939384	2	509.802571	1017.59059	1.8267	0.00093127	0.67087	0.00034201	2.4976	0.0012733	509.80256647450057	68.992	1.3504	68.992	68.642	69.993	0					76	42	2	0	0	0	0.89176	1	29072	29072		0.79363	0	1	1769100	+		16784	13388	7901	7939	19824	19824					0.08249823144490165
LANEVKVLL	9	Unmodified	_LANEVKVLL_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;CHD2-MYH9|1|fusion	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8173705935478	2	499.815867	997.617182	1.7575	0.00087844	-0.15681	-7.8377E-05	1.6007	0.00080007	499.81601725443215	46.48	0.40194	47.855	47.617	48.019	1.3751					30	12	3	0	0	0	0.0061207	2	19483	19483;19528		117.76	21.394	1	4713700			16785	1266	7902	7940	19825;19826	19825					0.11827790516804271
LANEVKVLL	9	Unmodified	_LANEVKVLL_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;CHD2-MYH9|1|fusion	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	499.815867	997.617182	1.048	0.0005238	0.17704	8.8487E-05	1.225	0.00061228	499.81598693278255	46.006	0.36756	47.976	47.758	48.126	1.9703	0.060467	0.00015063	NaN	117.76	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3640400			16786	1266	7902	7940							0.11827790516804271
LANFDEVTI	9	Unmodified	_LANFDEVTI_					0	0	0		tr|A0A7D6VQ91|A0A7D6VQ91_9CLOTPaladinOS=ClostridiumintestinaleOX=36845GN=HZF06_20040PE=3SV=1	tr|A0A7D6VQ91|A0A7D6VQ91_9CLOTPaladinOS=ClostridiumintestinaleOX=36845GN=HZF06_20040PE=3SV=1	tr|A0A7D6VQ91|A0A7D6VQ91_9CLOTPaladinOS=ClostridiumintestinaleOX=36845GN=HZF06_20040PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.2653991580009	2	511.263665	1020.51278	2.0269	0.0010363	0.10951	5.5987E-05	2.1364	0.0010923	511.2637615913724	66.692	0.37475	67.016	66.876	67.25	0.32449					31	11	4	0	0	0	0.66839	1	28014	28014		8.5933	0	1	8191600			16787	16786	7903	7941	19827	19827					0.003340439694284214
LANIKKVLI	9	Unmodified	_LANIKKVLI_					0	0	0		tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	tr|A0A7D6W1R1|A0A7D6W1R1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04160PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.5016357302666	3	337.902344	1010.6852	2.859	0.00096606	-2.7153	-0.0009175	0.1437	4.8558E-05	337.90151929929874	82.315	1.8657	83.985	82.709	84.574	1.67					72	59	2	0	0	0	0.11819	1	34484	34484		2.7352	0.23671	1	642840			16788	17021	7904	7942	19828	19828					0.18028660167453836
LANLEKWK	8	Unmodified	_LANLEKWK_					0	0	0		ENSG00000133106|ENST00000313624|EPSTI1;nc|ENSG00000133106|Q96J88|EPSTI1;nc|ENSG00000133106|Q96J88-3|EPSTI1	ENSG00000133106|ENST00000313624|EPSTI1	ENSG00000133106|ENST00000313624|EPSTI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2938110232353	2	501.292559	1000.57057	2.4857	0.0012461	1.5741	0.00078907	4.0598	0.0020351	501.2936781731848	66.363	0.57076	66.687	66.305	66.876	0.32449					30	17	3	0	0	0	0.87935	1	27742	27742		9.3474	0	1	1282600			16789	2560	7905	7943	19829	19829					0.07030350685522535
LANLVGLAE	9	Unmodified	_LANLVGLAE_					0	0	0		nc|ENSG00000121289|Q96ST8-2|CEP89;ENSG00000121289|ENST00000305768|CEP89;RHPN2-CEP89|1|fusion	nc|ENSG00000121289|Q96ST8-2|CEP89	nc|ENSG00000121289|Q96ST8-2|CEP89	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2643615603447	2	450.263468	898.512382	1.7063	0.00076826	1.458	0.00065649	3.1643	0.0014248	450.26395127622516	43.315	0.40369	43.315	43.119	43.523	0					25	12	3	0	0	0	0.1735	1	18103	18103		36.044	0	1	1925000			16790	2132	7906	7944	19830	19830					0.05906669040234647
LANLYSGDI	9	Unmodified	_LANLYSGDI_					0	0	0			REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2481262087822	2	483.250557	964.486562	1.3617	0.00065802	-4.2614	-0.0020593	-2.8997	-0.0014013	483.24848228638643	69.167	0.34023	71.02	70.828	71.168	1.853					34	10	4	0	0	0	0.46905	1	29019	29019		16.942	2.3606	1	2086300	+		16791	10498	7907	7945	19831	19831					0.002897747979545784
LANLYSGDI	9	Unmodified	_LANLYSGDI_					0	0	0			REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	483.250557	964.486562	1.7784	0.00085943	-5.4473	-0.0026324	-3.6689	-0.001773	483.24776518491257	71.42	0.28436	71.42	71.288	71.573	0	0.25294	-0.0007361	NaN	16.942	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	900540	+		16792	10498	7907	7945							0.002897747979545784
LANLYSGDI	9	Unmodified	_LANLYSGDI_					0	0	0			REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	483.250557	964.486562	2.2248	0.0010751	-4.3608	-0.0021074	-2.1361	-0.0010323	483.24859589222393	70.871	0.28664	71.195	71.049	71.336	0.32359	0.028163	0.00031399	NaN	16.942	21	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1017600	+		16793	10498	7907	7945							0.002897747979545784
LANLYSGDI	9	Unmodified	_LANLYSGDI_					0	0	0			REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	REV__OTOA|p.E272Vfs*17|1|0.06|ENSG00000155719|chr16:21697849-21697850|-/TGTGTTCACATCCTACGTGTGATCTC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	483.250557	964.486562	1.3617	0.00065802	-4.2614	-0.0020593	-2.8997	-0.0014013	483.24848228638643	69.167	0.34023	71.02	70.828	71.168	1.853	-0.14669	0.00041013	NaN	16.942	34	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2086300	+		16794	10498	7907	7945							0.002897747979545784
LANYLFHPN	9	Unmodified	_LANYLFHPN_					0	0	0			REV__tr|A0A7D6ZXY0|A0A7D6ZXY0_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23860PE=4SV=1	REV__tr|A0A7D6ZXY0|A0A7D6ZXY0_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23860PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.8133422732353	2	544.779816	1087.54508	1.8281	0.00099592	-3.8797	-0.0021136	-2.0515	-0.0011176	544.7778589014534	39.89	0.18545	41.753	41.646	41.831	1.8624					7	5	2	0	0	0	0.11518	1	16684	16684		11.64	0.81637	1	862180	+		16795	15769	7908	7946	19832	19832					0.00480876163078392
LAPAHTVTL	9	Unmodified	_LAPAHTVTL_					0	0	0		ENST00000389005.5_1_17:3716188-3716341:-|nuORF	ENST00000389005.5_1_17:3716188-3716341:-|nuORF	ENST00000389005.5_1_17:3716188-3716341:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1471740603447	2	461.77146	921.528367	4.3688	0.0020174	0.3636	0.0001679	4.7324	0.0021853	461.77184718015604	92.197	0.35414	93.133	92.988	93.342	0.93623					25	10	3	0	0	0	0.116	1	38806	38806		9.3474	0	1	1259600			16796	6243	7909	7947	19833	19833					0.06446375277153038
LAPARYTPV	9	Unmodified	_LAPARYTPV_					0	0	0			REV__ENST00000475002.1_1_20:44590515-44592348:-|nuORF	REV__ENST00000475002.1_1_20:44590515-44592348:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.8170043826103	2	494.284734	986.554916	1.7968	0.00088813	-3.5847	-0.0017719	-1.7879	-0.00088372	494.28332456926273	65.905	0.36501	67.813	67.649	68.014	1.9085					17	11	2	0	0	0	0.10306	1	27722	27722		19.439	4.6007	1	498990	+		16797	13310	7910	7948	19834	19834					0.06110064168467488
LAPFMKLAQ	9	Unmodified	_LAPFMKLAQ_					0	0	0		nc|ENSG00000183914|Q9P225-2|DNAH2;ENSG00000183914|ENST00000572933|DNAH2;DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant;DNAH2|p.M352Rfs*13|1|0.05|ENSG00000183914|chr17:7737143-7737143|T/-|frameshift_variant;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1966125369072	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.66	1	34.66	34.16	35.16	0								0	0	0	0.42693	1	14528	14528		0.23584	0	1				16798	4675;7946	7911	7949	19835	19835					0.060041789561978476
LAPFMKLAQ	9	Unmodified	_LAPFMKLAQ_					0	0	0		nc|ENSG00000183914|Q9P225-2|DNAH2;ENSG00000183914|ENST00000572933|DNAH2;DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant;DNAH2|p.M352Rfs*13|1|0.05|ENSG00000183914|chr17:7737143-7737143|T/-|frameshift_variant;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2;nc|ENSG00000183914|Q9P225-3|DNAH2	nc|ENSG00000183914|Q9P225-2|DNAH2	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1964294314384	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.838	1	34.838	34.338	35.338	0								0	0	0	0.42693	1	14602	14602		0.23584	0	1				16799	4675;7946	7911	7949	19836	19836					0.060041789561978476
LAPFWQDIL	9	Unmodified	_LAPFWQDIL_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8034545779228	2	551.800217	1101.58588	2.0123	0.0011104	1.8842	0.0010397	3.8965	0.0021501	551.8010106858909	68.387	0.84505	70.257	69.611	70.456	1.87					63	26	4	0	0	0	0.64949	1	28492	28492		9.3474	2.6243	1	3673900	+		16800	10465	7912	7950	19837	19837					0.03915217482699518
LAPGKHACLP	10	Unmodified	_LAPGKHACLP_					0	0	0		ENST00000538936.6_2_17:79861992-79862238:-|nuORF	ENST00000538936.6_2_17:79861992-79862238:-|nuORF	ENST00000538936.6_2_17:79861992-79862238:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	504.3177062869072	2	503.778762	1005.54297	2.1884	0.0011025	-1.2901	-0.00064991	0.89831	0.00045255	504.28135179133074	71.776	0.12575	72.1	72.037	72.163	0.32359					5	3	2	0	0	0	0.12513	1	30039	30039		4.3292	1.44	1	192910			16801	7208	7913	7951	19838	19838					0.04042124153613713
LAPGKHACLP	10	Unmodified	_LAPGKHACLP_					0	0	0		ENST00000538936.6_2_17:79861992-79862238:-|nuORF	ENST00000538936.6_2_17:79861992-79862238:-|nuORF	ENST00000538936.6_2_17:79861992-79862238:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.778762	1005.54297	1.6533	0.00083289	-4.2835	-0.0021579	-2.6302	-0.001325	503.7758988482544	70.379	0.43124	72.217	72.01	72.441	1.8378	0.05844	-0.00051546	NaN	4.3292	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718770			16802	7208	7913	7951							0.04042124153613713
LAPGWLVLN	9	Unmodified	_LAPGWLVLN_					0	0	0			REV__nc|ENSG00000068078|P22607-4|FGFR3	REV__nc|ENSG00000068078|P22607-4|FGFR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7920410037041	2	491.789653	981.564752	2.3648	0.001163	2.5273	0.0012429	4.8921	0.0024059	491.7908252851933	78.86	0.48479	79.169	78.864	79.349	0.30932					46	15	4	0	0	0	0.59203	1	32998	32998		11.64	1.4569	1	13525000	+		16803	14390	7914	7952	19839	19839					0.07323252173841865
LAPITALFH	9	Unmodified	_LAPITALFH_					0	0	0		nc|ENSG00000126106|Q6P2H8-2|TMEM53;TMEM53|p.L213Nfs*19|1|0.05|ENSG00000126106|chr1:44654757-44654758|-/AAATGTTCTTACCAGAGTTTAAATTT|frameshift_variant;ENSG00000126106|ENST00000372237|TMEM53	nc|ENSG00000126106|Q6P2H8-2|TMEM53	nc|ENSG00000126106|Q6P2H8-2|TMEM53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7916442751884	2	491.789653	981.564752	1.5304	0.00075262	3.1705	0.0015592	4.7009	0.0023119	491.7911754782824	79.037	0.48094	79.037	78.756	79.237	0					41	15	3	0	0	0	0.77526	1	32925	32925		4.3292	1.7518	1	17292000			16804	2300	7915	7953	19840	19840					0.07323252173841865
LAPKLTSPVI	10	Unmodified	_LAPKLTSPVI_					0	0	0		ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	ENST00000421852.5_1_3:185207567-185207957:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.8331176638603	2	519.831517	1037.64848	3.2793	0.0017047	-3.4539	-0.0017954	-0.17462	-9.0772E-05	519.8299406894322	107.57	0.18661	107.73	107.64	107.83	0.15795					29	9	4	0	0	0	0.88579	1	46241	46241		2.9952	0.93549	1	264930000			16805	6449	7916	7954	19841	19841					0.13116363550875576
LAPKQYILRI	10	Unmodified	_LAPKQYILRI_					0	0	0			REV__tr|A0A553SHY0|A0A553SHY0_NIACIBileacid:sodiumsymporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13845PE=4SV=1	REV__tr|A0A553SHY0|A0A553SHY0_NIACIBileacid:sodiumsymporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13845PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	607.8834106326103	2	607.884616	1213.75468	2.6473	0.0016093	-3.048	-0.0018529	-0.40074	-0.0002436	607.8825593774644	107.46	0.1843	107.51	107.39	107.58	0.052452					24	8	4	0	0	0	0.88022	1	45953	45953		3.5965	0.60125	1	41999000	+		16806	14826	7917	7955	19842	19842					0.15635119116222995
LAPPQWTQL	9	Unmodified	_LAPPQWTQL_					0	0	0			REV__ENSG00000103184|ENST00000251170|SEC14L5	REV__ENSG00000103184|ENST00000251170|SEC14L5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.7373535037041	2	527.290017	1052.56548	2.9856	0.0015743	-1.6023	-0.00084486	1.3833	0.0007294	527.2889019073589	61.561	0.24663	62.979	62.834	63.081	1.4177					10	7	2	0	0	0	0.10844	1	25771	25771		16.942	0	1	523450	+		16807	9096	7918	7956	19843	19843					0.04130046822888289
LAPQLLRPPLP	11	Unmodified	_LAPQLLRPPLP_					0	0	0			REV__ENSG00000179698|ENST00000323662|WDR97	REV__ENSG00000179698|ENST00000323662|WDR97	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8863403201103	2	607.884616	1213.75468	3.1035	0.0018866	-3.1874	-0.0019376	-0.083933	-5.1022E-05	607.8842122335911	105.96	0.14072	106.12	106.04	106.18	0.15859					15	6	3	0	0	0	1.0131	1	45258	45258		2.9952	0.26005	1	34193000	+		16808	11281	7919	7957	19844	19844					0.15635119116222995
LAPQLLRPPLP	11	Unmodified	_LAPQLLRPPLP_					0	0	0			REV__ENSG00000179698|ENST00000323662|WDR97	REV__ENSG00000179698|ENST00000323662|WDR97	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	607.884616	1213.75468	3.1035	0.0018866	-3.1874	-0.0019376	-0.083933	-5.1022E-05	607.8842122335911	105.96	0.14072	106.12	106.04	106.18	0.15859	0.0074503	0.00057913	NaN	2.9952	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34193000	+		16809	11281	7919	7957							0.15635119116222995
LAPQLLRPPLP	11	Unmodified	_LAPQLLRPPLP_					0	0	0			REV__ENSG00000179698|ENST00000323662|WDR97	REV__ENSG00000179698|ENST00000323662|WDR97	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	607.884616	1213.75468	3.2359	0.001967	-4.0758	-0.0024776	-0.83992	-0.00051057	607.8837475820977	105.94	0.12238	106.1	106.03	106.15	0.16679	-0.0074503	-0.00050091	NaN	2.9952	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47678000	+		16810	11281	7919	7957							0.15635119116222995
LAPSRRPR	8	Unmodified	_LAPSRRPR_					0	0	0			REV__ENST00000527800.5_1_16:66583301-66583592:-|nuORF	REV__ENST00000527800.5_1_16:66583301-66583592:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1997863650322	2	476.793592	951.572632	2.5677	0.0012242	2.6713	0.0012737	5.239	0.0024979	476.7950080971518	61.22	0.34752	61.22	61.014	61.362	0					22	10	3	0	0	0	2.3239	1	25563	25563		2.5775	0	1	2582100	+		16811	13679	7920	7958	19845	19845					0.09490824213992255
LAPSRRPR	8	Unmodified	_LAPSRRPR_					0	0	0			REV__ENST00000527800.5_1_16:66583301-66583592:-|nuORF	REV__ENST00000527800.5_1_16:66583301-66583592:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.2002136111259	2	476.793592	951.572632	2.9797	0.0014207	2.2065	0.001052	5.1862	0.0024727	476.79475325614993	60.521	0.3162	60.849	60.664	60.98	0.32809					20	9	3	0	0	0	2.3239	1	25294	25294		0	0	1	1882200	+		16812	13679	7920	7958	19846	19846					0.09490824213992255
LAPVSRFAL	9	Unmodified	_LAPVSRFAL_					0	0	0			REV__ENSG00000175928|ENST00000319331|LRRN1	REV__ENSG00000175928|ENST00000319331|LRRN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2012512087822	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.12	1	103.3	102.8	103.8	0.18066								0	0	0	0.42693	1	43398	43398		1.1933	0	1		+		16813	11166	7921	7959	19847	19847					0.08826654548136048
LAQEKELV	8	Unmodified	_LAQEKELV_					0	0	0			REV__ENST00000465600.1_1_10:124008150-124013568:+|nuORF	REV__ENST00000465600.1_1_10:124008150-124013568:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2722045779228	2	465.26875	928.522947	3.5741	0.0016629	3.2965	0.0015338	6.8706	0.0031967	465.27080510438196	91.553	0.3763	92.88	92.678	93.054	1.3269					31	11	3	0	0	0	0.87655	1	38538	38538		11.114	0	1	1582400	+		16814	10048	7922	7960	19848	19848					0.05582651694658125
LAQFISDL	8	Unmodified	_LAQFISDL_					0	0	0			REV__tr|A0A553SHG4|A0A553SHG4_NIACINucleosidetriphosphatepyrophosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_12855PE=4SV=1	REV__tr|A0A553SHG4|A0A553SHG4_NIACINucleosidetriphosphatepyrophosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_12855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7526733279228	2	453.750193	905.485833	1.6437	0.00074581	1.7039	0.00077313	3.3475	0.0015189	453.75130786815225	68.821	0.18217	70.674	70.527	70.709	1.853					7	5	2	0	0	0	0.87803	1	28868	28868		10.183	0	1	1358300	+		16815	14795	7923	7961	19849	19849					0.029309801489034726
LAQFKMTLK	9	Unmodified	_LAQFKMTLK_					0	0	0			REV__nc|ENSG00000107551|Q9H2L5-3|RASSF4	REV__nc|ENSG00000107551|Q9H2L5-3|RASSF4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	360.2013122439384	3	360.547572	1078.62089	-0.32936	-0.00011875	1.9756	0.00071229	1.6462	0.00059355	360.5488628617647	11.221	0.24526	11.983	11.853	12.099	0.76165					11	7	2	0	0	0	0.11901	1	4640	4640		1.0715	0.83562	1	310150	+		16816	9234	7924	7962	19850	19850					0.0847213701902092
LAQHQQRR	8	Unmodified	_LAQHQQRR_					0	0	0			REV__ENST00000404241.6_1_22:39916676-39916745:+|nuORF	REV__ENST00000404241.6_1_22:39916676-39916745:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1406127810478	2	518.791581	1035.56861	1.8775	0.00097401	2.278	0.0011818	4.1554	0.0021558	518.7930647137022	51.481	0.37313	51.807	51.633	52.006	0.32553					27	11	3	0	0	0	2.3239	1	21504	21504		0.69038	0.16561	1	3764700	+		16817	12892	7925	7963	19851	19851					0.05224734720286506
LAQHTSSELS	10	Unmodified	_LAQHTSSELS_					0	0	0			REV__nc|ENSG00000168487|P13497-3|BMP1	REV__nc|ENSG00000168487|P13497-3|BMP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.7673217654228	2	536.767103	1071.51965	1.5778	0.00084691	-1.452	-0.00077939	0.12578	6.7517E-05	536.7661253338206	67.637	0.25203	67.637	67.537	67.789	0					25	7	5	0	0	0	0.79268	1	28181	28181		13.042	1.4022	1	1764600	+		16818	14483	7926	7964	19852	19852					-0.013246431499965183
LAQIIQVV	8	Unmodified	_LAQIIQVV_					0	0	0		NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant;NAV2|p.D962Ifs*69|1|0.03|ENSG00000166833|chr11:20036003-20036004|-/CATTCTTTTTCATCTTTTTA|frameshift_variant;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2851745486259	2	442.284203	882.553853	1.4816	0.00065528	1.4721	0.00065108	2.9537	0.0013064	442.28438008516224	74.222	0.25642	74.222	74.11	74.367	0					11	7	2	0	0	0	0.88409	1	30914	30914		6.3541	0	1	826170			16819	3923	7927	7965	19853	19853					0.10787849799567084
LAQIRKGCLPL	11	Unmodified	_LAQIRKGCLPL_					0	0	0			REV__ENST00000262570.9_2_7:132766727-132766832:-|nuORF	REV__ENST00000262570.9_2_7:132766727-132766832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.5825683474541	3	404.581276	1210.722	2.7848	0.0011267	1.7404	0.00070415	4.5253	0.0018308	404.58190808837855	91.716	0.3244	91.907	91.723	92.047	0.19042					17	9	2	0	0	0	1.0362	1	38405	38405		0.45452	0	1	592860	+		16820	12199	7928	7966	19854	19854					0.12506588721726075
LAQLQQSLV	9	Unmodified	_LAQLQQSLV_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.W1154Cfs*31|1|0.18|ENSG00000137877|chr15:41878350-41878351|-/TA|frameshift_variant	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2961608767509	2	500.295299	998.576045	1.6083	0.00080463	-0.39935	-0.00019979	1.209	0.00060484	500.2949406906399	66.547	0.32153	66.547	66.35	66.671	0					14	9	2	0	0	0	0.66839	1	27692	27692		8.5933	2.8329	1	629500			16821	2799	7929	7967	19855	19855					0.07670029477321805
LAQLVTPMLV	10	Unmodified	_LAQLVTPMLV_					0	0	0			REV__nc|ENSG00000111783|Q33E94-4|RFX4	REV__nc|ENSG00000111783|Q33E94-4|RFX4	MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2179443240166	3	362.219344	1083.6362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.41716	1	0.41716	-0.082842	0.91716	0								0	0	0	0.66237	1	171	171		0.15932	0	1		+		16822	9342	7930	7968	19856	19856					0.09773003816189885
LAQMEEAPL	9	Unmodified	_LAQMEEAPL_					0	0	0		ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613|MTMR1;nc|ENSG00000063601|Q13613-2|MTMR1	ENSG00000063601|ENST00000445323|MTMR1	ENSG00000063601|ENST00000445323|MTMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2530090212822	2	501.252243	1000.48993	0.877	0.0004396	1.7409	0.00087262	2.6179	0.0013122	501.25300061908956	70.68	0.45067	72.518	72.26	72.711	1.8378					35	14	3	0	0	0	0.48482	1	29658	29658		16.942	0	1	7608300			16823	764	7931	7969	19857	19857					-0.010292984196894395
LAQPEKLELVV	11	Unmodified	_LAQPEKLELVV_					0	0	0			REV__ENST00000495397.1_1_1:161696362-161697449:+|nuORF	REV__ENST00000495397.1_1_1:161696362-161697449:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8708373904228	2	619.871371	1237.72819	2.3481	0.0014556	-2.5532	-0.0015826	-0.20501	-0.00012708	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	1.0362	1	32971	32971		0.30703	0	1	8928300	+		16824	10660	7932	7970	19858	19858					0.11883385434202864
LAQPEKLELVV	11	Unmodified	_LAQPEKLELVV_					0	0	0			REV__ENST00000495397.1_1_1:161696362-161697449:+|nuORF	REV__ENST00000495397.1_1_1:161696362-161697449:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8711425662041	2	619.871371	1237.72819	1.4221	0.00088151	-2.3074	-0.0014303	-0.88533	-0.00054879	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	1.0362	1	32662	32662		0.30703	0	1	7012900	+		16825	10660	7932	7970	19859	19859					0.11883385434202864
LAQPPPDQSL	10	Unmodified	_LAQPPPDQSL_					0	0	0			REV__ENST00000380548.8_1_9:18770742-18777100:+|nuORF	REV__ENST00000380548.8_1_9:18770742-18777100:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2846557497978	2	533.282389	1064.55022	2.6226	0.0013986	-1.2645	-0.00067432	1.3582	0.00072428	533.2814199053734	69.582	0.47183	71.435	71.136	71.608	1.853					33	14	4	0	0	0	0.75645	2	29199	29140;29199		15.847	2.2306	1	5213600	+		16826	12759	7933	7971	19860;19861	19861					0.020531352350417365
LAQQQRPKTRR	11	Unmodified	_LAQQQRPKTRR_					0	0	0		ENSG00000145386|ENST00000274026|CCNA2	ENSG00000145386|ENST00000274026|CCNA2	ENSG00000145386|ENST00000274026|CCNA2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	461.7729675173759	3	461.276014	1380.80621	3.3587	0.0015493	-0.7473	-0.00034471	2.6114	0.0012046	461.2757149589229	96.348	0.254	96.453	96.381	96.635	0.105					11	7	2	0	0	0	0.14606	1	40389	40389		7.0371	1.1689	1	612170			16827	3108	7934	7972	19862	19862					0.13104255862822356
LAQRKHRV	8	Unmodified	_LAQRKHRV_					0	0	0			REV__ENSG00000150051|ENST00000419761|MKX	REV__ENSG00000150051|ENST00000419761|MKX	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.3175842165947	2	504.314692	1006.61483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.366	1	72.366	71.866	72.866	0								0	0	0	1.0178	1	30132	30132		2.8892	0.31174	1		+		16828	10379	7935	7973	19863	19863					0.11178799622371116
LAQRVCIQRKP	11	Unmodified	_LAQRVCIQRKP_					0	0	0		nc|ENSG00000104884|P18074-2|ERCC2;ENSG00000104884|ENST00000391945|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	nc|ENSG00000104884|P18074-2|ERCC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.0052978396416	4	328.697404	1310.76051	-0.28015	-9.2085E-05	-0.35629	-0.00011711	-0.63644	-0.0002092	328.6971960997442	28.921	1.4012	30.204	29.094	30.495	1.2825					103	45	3	0	0	0	0.14606	1	11803	11803		0.40827	0.24894	1	2421900			16829	1487	7936	7974	19864	19864					0.11755894356224417
LAQSLYMV	8	Unmodified	_LAQSLYMV_					0	0	0		SLC22A6|p.G320Kfs*51|1|0.08|ENSG00000197901|chr11:62981064-62981065|-/TT|frameshift_variant;nc|ENSG00000197901|Q4U2R8-3|SLC22A6;nc|ENSG00000197901|Q4U2R8-4|SLC22A6;ENSG00000197901|ENST00000360421|SLC22A6;nc|ENSG00000197901|Q4U2R8|SLC22A6	SLC22A6|p.G320Kfs*51|1|0.08|ENSG00000197901|chr11:62981064-62981065|-/TT|frameshift_variant	SLC22A6|p.G320Kfs*51|1|0.08|ENSG00000197901|chr11:62981064-62981065|-/TT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1467773318291	2	462.746596	923.478639	1.6218	0.0007505	0.59771	0.00027659	2.2196	0.0010271	462.74701028244937	58.668	0.2558	60.086	59.941	60.196	1.4181					12	7	2	0	0	0	2.3239	1	24588	24588		6.3541	0	1	994550			16830	5029	7937	7975	19865	19865					0.01383924276842663
LAQTRYLP	8	Unmodified	_LAQTRYLP_					0	0	0		nc|ENSG00000165694|Q6ZUT3-2|FRMD7;ENSG00000165694|ENST00000298542|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	nc|ENSG00000165694|Q6ZUT3-2|FRMD7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	480.7801086306572	2	481.276909	960.539266	2.4232	0.0011662	0.78041	0.00037559	3.2036	0.0015418	481.27832235640346	39.999	0.27298	41.309	41.148	41.421	1.3102					17	8	3	0	0	0	2.3239	1	16752	16752		8.5933	0.68312	1	677340			16831	3853	7938	7976	19866	19866					0.05741777651417124
LARARRGL	8	Unmodified	_LARARRGL_					0	0	0		ENST00000522483.2_1_19:36526344-36545129:-|nuORF;ENSG00000161277|ENST00000292894|THAP8	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.7963134646416	2	456.796135	911.577717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.457	1	71.457	70.957	71.957	0								0	0	0	1.0178	1	29759	29759		10.183	0	1				16832	3593	7939	7977	19867	19867					0.11839128076599081
LARARRGL	8	Unmodified	_LARARRGL_					0	0	0		ENST00000522483.2_1_19:36526344-36545129:-|nuORF;ENSG00000161277|ENST00000292894|THAP8	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	ENST00000522483.2_1_19:36526344-36545129:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.7946960330009	2	456.796135	911.577717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.992	1	71.316	70.816	71.816	0.32359								0	0	0	1.0178	1	29715	29715		10.183	0	1				16833	3593	7939	7977	19868	19868					0.11839128076599081
LARDAHRTV	9	Unmodified	_LARDAHRTV_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:6942080-7042306:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.2963134646416	2	519.793789	1037.57303	3.2614	0.0016952	3.6573	0.001901	6.9187	0.0035963	519.7955947096253	64.853	0.27734	66.256	66.076	66.353	1.4038					13	8	2	0	0	0	0.10844	1	27233	27233		3.9444	0.3479	1	591950			16834	1364	7940	7978	19869	19869					0.0557419914316597
LARDMTSC	8	Unmodified	_LARDMTSC_					0	0	0		LDLR|p.R709T|1|0.32|ENSG00000130164|chr19:11120508-11120508|G/C|missense_variant	LDLR|p.R709T|1|0.32|ENSG00000130164|chr19:11120508-11120508|G/C|missense_variant	LDLR|p.R709T|1|0.32|ENSG00000130164|chr19:11120508-11120508|G/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	448.7595397830009	2	448.701863	895.389172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.089	1	58.503	58.003	59.003	1.4145								0	0	0	1.0178	1	23928	23928		2.8892	0	1				16835	7782	7941	7979	19870	19870					-0.06270653674198456
LARERLVR	8	Unmodified	_LARERLVR_					0	0	0			REV__nc|ENSG00000130052|Q92502|STARD8	REV__nc|ENSG00000130052|Q92502|STARD8	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2179748415947	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.113	1	90.133	89.633	90.633	1.0199								0	0	0	1.0178	1	37559	37559		1.6526	0	1		+		16836	9764	7942	7980	19871	19871					0.1247966641955145
LARERLVR	8	Unmodified	_LARERLVR_					0	0	0			REV__nc|ENSG00000130052|Q92502|STARD8	REV__nc|ENSG00000130052|Q92502|STARD8	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2189819216728	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.358	1	90.378	89.878	90.878	1.0199								0	0	0	1.0178	1	37658	37658		1.6526	0	1		+		16837	9764	7942	7980	19872	19872					0.1247966641955145
LARERLVR	8	Unmodified	_LARERLVR_					0	0	0			REV__nc|ENSG00000130052|Q92502|STARD8	REV__nc|ENSG00000130052|Q92502|STARD8	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2184326052666	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.671	1	90.117	89.617	90.617	1.4467								0	0	0	1.0178	1	37366	37366		1.6526	0	1		+		16838	9764	7942	7980	19873	19873					0.1247966641955145
LARERLVR	8	Unmodified	_LARERLVR_					0	0	0			REV__nc|ENSG00000130052|Q92502|STARD8	REV__nc|ENSG00000130052|Q92502|STARD8	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2177612185478	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.804	1	90.251	89.751	90.751	1.4467								0	0	0	1.0178	1	37419	37419		1.6526	0	1		+		16839	9764	7942	7980	19874	19874					0.1247966641955145
LARFHKVQK	9	Unmodified	_LARFHKVQK_					0	0	0			REV__ENST00000471834.1_1_6:152657861-152688565:-|nuORF	REV__ENST00000471834.1_1_6:152657861-152688565:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2344848513603	3	376.232975	1125.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.89	1	103.06	102.56	103.56	0.16445								0	0	0	0.42693	1	43346	43346		1.0715	0.29493	1		+		16840	9810	7943	7981	19875	19875					0.11928525970688497
LARFYYSKLF	10	Unmodified	_LARFYYSKLF_					0	0	0			REV__tr|A0A7D6ZVE2|A0A7D6ZVE2_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03750PE=4SV=1	REV__tr|A0A7D6ZVE2|A0A7D6ZVE2_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	654.3625976443291	2	654.360973	1306.70739	2.4483	0.0016021	1.208	0.00079047	3.6563	0.0023926	654.3611957371809	62.166	0.46939	62.166	61.899	62.368	0					42	14	4	0	0	0	0.63205	1	25934	25934		21.537	3.3906	1	3089500	+		16841	15732	7944	7982	19876	19876					0.06630839845206538
LARGGHAR	8	Unmodified	_LARGGHAR_					0	0	0		ENST00000524227.5_1_8:41525962-41555361:-|nuORF	ENST00000524227.5_1_8:41525962-41555361:-|nuORF	ENST00000524227.5_1_8:41525962-41555361:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3157836794853	2	419.243735	836.472918	-0.1563	-6.5528E-05	-3.4319	-0.0014388	-3.5882	-0.0015043	419.2422212315203	20.129	0.30887	20.129	19.979	20.288	0					17	9	3	0	0	0	2.3239	1	8433	8433		2.5775	0	1	821360			16842	7108	7945	7983	19877	19877					0.04814006600031462
LARGLGPEV	9	Unmodified	_LARGLGPEV_					0	0	0			REV__ENSG00000126767|ENST00000376983|ELK1	REV__ENSG00000126767|ENST00000376983|ELK1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.4013244509697	3	304.515148	910.523616	0.52313	0.0001593	2.2474	0.00068438	2.7706	0.00084368	304.51554737094017	31.732	0.33456	32.023	31.785	32.119	0.29086					16	10	2	0	0	0	0.11941	1	13337	13337		1.0715	0	1	371980	+		16843	9701	7946	7984	19878	19878					0.06477491134376123
LARGLGPEV	9	Unmodified	_LARGLGPEV_					0	0	0			REV__ENSG00000126767|ENST00000376983|ELK1	REV__ENSG00000126767|ENST00000376983|ELK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	304.515148	910.523616	-0.46255	-0.00014085	3.6791	0.0011203	3.2165	0.00097948	304.5159091534066	30.434	0.27877	31.717	31.595	31.873	1.2825	-0.14233	0.0011818	NaN	1.0715	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241140	+		16844	9701	7946	7984							0.06477491134376123
LARKFGFV	8	Unmodified	_LARKFGFV_					0	0	0		ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4;ENST00000441747.6_1_19:1490111-1490306:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	469.3371154665947	2	469.284537	936.554522	1.6607	0.00077935	-1.7264	-0.00081018	-0.065698	-3.0831E-05	469.2837341652473	100.44	0.1206	100.44	100.38	100.51	0					5	3	2	0	0	0	2.3239	1	42024	42024		0.79363	0	1	1048200			16845	7463	7947	7985	19879	19879					0.08370689239291096
LARKFGFV	8	Unmodified	_LARKFGFV_					0	0	0		ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4;ENST00000441747.6_1_19:1490111-1490306:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	469.3415099978447	2	469.284537	936.554522	3.4676	0.0016273	-1.7753	-0.00083313	1.6923	0.00079417	469.28331101768595	100.4	0.12328	100.47	100.41	100.53	0.072716					5	3	2	0	0	0	2.3239	1	42047	42047		0.79363	0	1	601690			16846	7463	7947	7985	19880	19880					0.08370689239291096
LARKKERRP	9	Unmodified	_LARKKERRP_					0	0	0		chr15:90981981-90982554|166|11.6|0.04|8.04|-|1|TE_info:AluSg,AluSg_dup28501,Alu,SINE,donor,+,90982554,90982765|PRC1,None|6	chr15:90981981-90982554|166|11.6|0.04|8.04|-|1|TE_info:AluSg,AluSg_dup28501,Alu,SINE,donor,+,90982554,90982765|PRC1,None|6	chr15:90981981-90982554|166|11.6|0.04|8.04|-|1|TE_info:AluSg,AluSg_dup28501,Alu,SINE,donor,+,90982554,90982765|PRC1,None|6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3680908083916	2	577.367456	1152.72036	2.4923	0.001439	-0.51786	-0.00029899	1.9744	0.00114	577.3671412862619	88.258	0.68922	88.493	88.228	88.917	0.23471					80	21	5	0	0	0	0.84963	1	37133	37133		0.6015	0	1	87194000			16847	209	7948	7986	19881	19881					0.1501071574798516
LARMLREL	8	Unmodified	_LARMLREL_					0	0	0		nc|ENSG00000173638|P41440-3|SLC19A1;nc|ENSG00000173638|P41440-2|SLC19A1;ENSG00000173638|ENST00000311124|SLC19A1	nc|ENSG00000173638|P41440-3|SLC19A1	nc|ENSG00000173638|P41440-3|SLC19A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3010131716728	2	501.299862	1000.58517	2.4498	0.0012281	-0.13549	-6.792E-05	2.3143	0.0011602	501.30012702357254	62.981	0.25077	63.311	63.161	63.412	0.32974					13	7	2	0	0	0	0.87106	1	26403	26403		14.582	1.0738	1	956390			16848	4293	7949	7987	19882	19882					0.08490099562027353
LARPLLELKKL	11	Unmodified	_LARPLLELKKL_					0	0	0			REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	REV__ENST00000461377.5_1_7:45039147-45115653:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4374877810478	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.31	1	109.46	108.96	109.96	0.1548								0	0	0	0.63775	1	47374	47374		0.30703	0	1		+		16849	13196	7950	7988	19883	19883					0.2196793673015236
LARQNMDLGF	10	Unmodified	_LARQNMDLGF_					0	0	0		ENSG00000165953|ENST00000677451|SERPINA12	ENSG00000165953|ENST00000677451|SERPINA12	ENSG00000165953|ENST00000677451|SERPINA12	MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7983276247978	2	582.79514	1163.57573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.429	1	82.662	82.162	83.162	1.2332								0	0	0	0.65773	1	34185	34185		7.2892	0	1				16850	3872	7951	7989	19884	19884					0.000482864858213361
LARRRLVK	8	Unmodified	_LARRRLVK_					0	0	0		ENSG00000155561|ENST00000285968|NUP205;ENST00000477620.5_1_7:135320372-135330929:+|nuORF	ENSG00000155561|ENST00000285968|NUP205	ENSG00000155561|ENST00000285968|NUP205	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.2187072634697	3	337.901449	1010.68252	4.2393	0.0014325	-0.066865	-2.2594E-05	4.1724	0.0014099	337.9015214980989	88.325	0.76836	89.381	88.89	89.659	1.0562					37	23	2	0	0	0	2.3239	1	37187	37187		1.6526	1.4168	1	250050			16851	3423	7952	7990	19885	19885					0.17760249553168705
LARSTEVGAV	10	Unmodified	_LARSTEVGAV_					0	0	0			REV__ENSG00000169221|ENST00000409939|TBC1D10B	REV__ENSG00000169221|ENST00000409939|TBC1D10B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	501.3074218630791	2	501.782556	1001.55056	1.8435	0.00092503	-2.2095	-0.0011087	-0.36604	-0.00018367	501.78127466400144	57.373	0.13512	57.373	57.344	57.479	0					8	5	2	0	0	0	0.12425	1	23967	23967		19.257	5.3509	1	1201100	+		16852	10938	7953	7991	19886	19886					0.04984554954921805
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2025024294853	4	328.202416	1308.78056	-2.0918	-0.00068655	2.335	0.00076634	0.24311	7.9789E-05	328.20286600368524	38.54	0.65027	38.54	38.132	38.782	0					75	29	4	0	0	0	1.0191	1	16203	16203		2.6312	0.19645	1	10715000			16853	5773	7954	7992	19887	19887					0.13851968567837503
LARTVTLYLFL	11	Unmodified	_LARTVTLYLFL_					0	0	0		ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	ENST00000304411.2_1_3:71804264-71804414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2021057009697	4	328.202416	1308.78056	0.93404	0.00030655	-0.65957	-0.00021647	0.27447	9.0082E-05	328.2016249302613	37.842	0.41966	38.147	37.966	38.385	0.30497					59	20	4	0	0	0	1.0191	2	15959	15959;16002		2.6312	0.54523	1	8489900			16854	5773	7954	7992	19888;19889	19888					0.13851968567837503
LARWEQHIYLL	11	Unmodified	_LARWEQHIYLL_					0	0	0		tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2710143923759	3	481.269866	1440.78777	1.6702	0.00080381	2.6288	0.0012651	4.299	0.002069	481.2699980591815	46.143	0.25148	47.518	47.398	47.649	1.3751					17	7	3	0	0	0	0.96769	1	19345	19345		2.6312	0.37851	1	1176100			16855	16320	7955	7993	19890	19890					0.08500701168304658
LARWEQHIYLL	11	Unmodified	_LARWEQHIYLL_					0	0	0		tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	tr|A0A553SL53|A0A553SL53_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20005PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2706786990166	3	481.269866	1440.78777	1.267	0.00060977	3.1569	0.0015193	4.4239	0.0021291	481.27074875259257	45.677	0.31581	47.647	47.536	47.852	1.9703					15	9	2	0	0	0	0.96769	1	19142	19142		2.6312	0	1	1159500			16856	16320	7955	7993	19891	19891					0.08500701168304658
LARWVIKNL	9	Unmodified	_LARWVIKNL_					0	0	0			REV__ENST00000432242.5_1_2:98833411-98885811:+|nuORF	REV__ENST00000432242.5_1_2:98833411-98885811:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017028689384	3	371.569476	1111.6866	1.5551	0.00057781	0.79565	0.00029564	2.3507	0.00087345	371.5694475420871	76.248	0.97537	77.542	76.724	77.699	1.2938					51	31	3	0	0	0	0.11938	1	32011	32011		1.1933	0	1	1297600	+		16857	10919	7956	7994	19892	19892					0.13522294256222267
LASALLEVV	9	Unmodified	_LASALLEVV_					0	0	0			REV__ENSG00000164494|ENST00000369037|PDSS2	REV__ENSG00000164494|ENST00000369037|PDSS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	914.5579711794853	1	914.55571	913.548434	1.7387	0.0015901	0.49563	0.00045328	2.2343	0.0020434	914.5560529170336	74.604	0.34712	74.604	74.43	74.777	0					22	10	3	0	0	0	0.046276	1	31081	31081		70.716	0	1	2121600	+		16858	10739	7957	7995	19893	19893					0.08820126217096913
LASALLEVV	9	Unmodified	_LASALLEVV_					0	0	0			REV__ENSG00000164494|ENST00000369037|PDSS2	REV__ENSG00000164494|ENST00000369037|PDSS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	914.5574218630791	1	914.55571	913.548434	2.5631	0.0023441	-0.84784	-0.0007754	1.7152	0.0015687	914.5545140622683	74.168	0.34914	74.493	74.265	74.614	0.32494					23	10	3	0	0	0	0.069258	1	30983	30983		60.39	9.5345	1	1836400	+		16859	10739	7957	7995	19894	19894					0.08820126217096913
LASALLEVV	9	Unmodified	_LASALLEVV_					0	0	0			REV__ENSG00000164494|ENST00000369037|PDSS2	REV__ENSG00000164494|ENST00000369037|PDSS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	914.55571	913.548434	1.7387	0.0015901	0.49563	0.00045328	2.2343	0.0020434	914.5560529170336	74.604	0.34712	74.604	74.43	74.777	0	0.15362	0.00071941	NaN	70.716	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2121600	+		16860	10739	7957	7995							0.08820126217096913
LASDRYGLLAF	11	Unmodified	_LASDRYGLLAF_					0	0	0		ENSG00000105509|ENST00000540069|HAS1;nc|ENSG00000105509|Q92839|HAS1	ENSG00000105509|ENST00000540069|HAS1	ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3349487185478	2	613.332413	1224.65027	1.807	0.0011083	-0.87401	-0.00053606	0.93296	0.00057221	613.3318269532828	59.012	0.7056	60.431	59.942	60.648	1.4196					72	22	4	0	0	0	0.2718	1	24580	24580		34.402	0.95682	1	9784700			16861	1521	7958	7996	19895	19895					0.04693372568840459
LASDRYGLLAF	11	Unmodified	_LASDRYGLLAF_					0	0	0		ENSG00000105509|ENST00000540069|HAS1;nc|ENSG00000105509|Q92839|HAS1	ENSG00000105509|ENST00000540069|HAS1	ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3320800662041	2	613.332413	1224.65027	1.543	0.00094635	-0.70057	-0.00042968	0.84239	0.00051667	613.3319781179256	58.496	0.76057	60.465	59.962	60.723	1.969					68	24	3	0	0	0	0.1347	1	24518	24518		49.554	3.532	1	8830300			16862	1521	7958	7996	19896	19896					0.04693372568840459
LASDRYGLLAF	11	Unmodified	_LASDRYGLLAF_					0	0	0		ENSG00000105509|ENST00000540069|HAS1;nc|ENSG00000105509|Q92839|HAS1	ENSG00000105509|ENST00000540069|HAS1	ENSG00000105509|ENST00000540069|HAS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3342773318291	2	613.332413	1224.65027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.701	1	60.67	60.17	61.17	1.969								0	0	0	0.38742	1	24628	24628		31.268	0	1				16863	1521	7958	7996	19897	19897					0.04693372568840459
LASFITGLVV	10	Unmodified	_LASFITGLVV_					0	0	0		tr|A0A553SUH1|A0A553SUH1_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06965PE=4SV=1	tr|A0A553SUH1|A0A553SUH1_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06965PE=4SV=1	tr|A0A553SUH1|A0A553SUH1_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_06965PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8051635622978	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.85124	1	28332	28332		6.7232	0	1	98417000			16864	16693	7959	7997	19898	19898					0.09772388142516775
LASHLVGDI	9	Unmodified	_LASHLVGDI_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1461364626884	2	462.761092	923.507631	1.8519	0.000857	0.79612	0.00036841	2.6481	0.0012254	462.7616915678705	31.308	0.21379	31.599	31.508	31.722	0.29086					11	6	2	0	0	0	0.11812	1	13192	13192		2.0598	0	1	392070			16865	7624	7960	7998	19899	19899					0.042817848974891604
LASHLVGDI	9	Unmodified	_LASHLVGDI_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1466247439384	2	462.761092	923.507631	1.0361	0.00047947	0.48689	0.00022531	1.523	0.00070478	462.76146586581456	30.111	0.27676	31.394	31.225	31.502	1.2825					14	8	2	0	0	0	0.11645	1	12603	12603		4.756	4.2312	1	2153300			16866	7624	7960	7998	19900	19900					0.042817848974891604
LASHLVGDI	9	Unmodified	_LASHLVGDI_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|449|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	462.761092	923.507631	1.0839	0.00050159	0.73851	0.00034175	1.8224	0.00084334	462.7614131141822	29.662	0.21217	31.461	31.325	31.538	1.7987	-0.10391	0.00020373	NaN	4.756	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1741700			16867	7624	7960	7998							0.042817848974891604
LASIIAISL	9	Unmodified	_LASIIAISL_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	900.5798828005791	1	900.576445	899.569169	2.402	0.0021632	0.25927	0.00023349	2.6613	0.0023967	900.5770018320046	85.115	0.25705	85.115	84.972	85.229	0					10	7	2	0	0	0	0.069258	1	35474	35474		60.39	0	1	534830	+		16868	11090	7961	7999	19901	19901					0.11536716596765473
LASIIAISL	9	Unmodified	_LASIIAISL_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7939636111259	2	450.791861	899.569169	3.0744	0.0013859	2.1639	0.00097547	5.2383	0.0023614	450.7925773481008	84.609	0.35361	84.869	84.693	85.047	0.26083					16	10	2	0	0	0	0.09539	1	35404	35404		50.855	3.9342	1	1097400	+		16869	11090	7961	7999	19902	19902					0.11536716596765473
LASIIAISL	9	Unmodified	_LASIIAISL_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7939330935478	2	450.791861	899.569169	2.1559	0.00097187	2.3185	0.0010452	4.4745	0.002017	450.7928787549493	83.169	0.31586	84.806	84.694	85.01	1.6379					23	9	3	0	0	0	0.069258	1	34883	34883		60.39	0	1	2412900	+		16870	11090	7961	7999	19903	19903					0.11536716596765473
LASIIAISL	9	Unmodified	_LASIIAISL_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	900.576445	899.569169	2.402	0.0021632	0.25927	0.00023349	2.6613	0.0023967	900.5770018320046	85.115	0.25705	85.115	84.972	85.229	0	0.14309	0.00037237	NaN	60.39	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534830	+		16871	11090	7961	7999							0.11536716596765473
LASIIAISL	9	Unmodified	_LASIIAISL_					0	0	0			REV__ENSG00000173250|ENST00000311104|GPR151	REV__ENSG00000173250|ENST00000311104|GPR151	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	900.576445	899.569169	2.5873	0.0023301	-0.68067	-0.000613	1.9067	0.0017171	900.5758466970342	84.568	0.25661	84.829	84.726	84.983	0.26083	-0.14309	-0.00047413	NaN	60.39	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525000	+		16872	11090	7961	7999							0.11536716596765473
LASLAADVI	9	Unmodified	_LASLAADVI_					0	0	0			REV__nc|ENSG00000143870|Q15084-3|PDIA6	REV__nc|ENSG00000143870|Q15084-3|PDIA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	872.5110351443291	1	872.50876	871.501483	2.8684	0.0025027	-0.69044	-0.00060242	2.178	0.0019003	872.5083528375053	59.81	0.24696	61.779	61.64	61.887	1.969					12	7	2	0	0	0	0.087207	1	25110	25110		53.576	0	1	1029400	+		16873	10226	7962	8000	19904	19904					0.060592666659431416
LASLAADVI	9	Unmodified	_LASLAADVI_					0	0	0			REV__nc|ENSG00000143870|Q15084-3|PDIA6	REV__nc|ENSG00000143870|Q15084-3|PDIA6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	872.50876	871.501483	2.8684	0.0025027	-0.69044	-0.00060242	2.178	0.0019003	872.5083528375053	59.81	0.24696	61.779	61.64	61.887	1.969	0.049496	-0.00024944	NaN	53.576	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029400	+		16874	10226	7962	8000							0.060592666659431416
LASLALLAS	9	Unmodified	_LASLALLAS_					0	0	0		ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.5292846560478	1	858.529495	857.522219	1.6579	0.0014234	-0.60337	-0.00051801	1.0546	0.00090538	858.5286489345883	65.264	0.28024	67.172	67.032	67.312	1.9085					13	8	2	0	0	0	0.051699	1	27399	27399		67.344	3.781	1	1029600			16875	6736	7963	8001	19905	19905					0.08775857045611701
LASLALLAS	9	Unmodified	_LASLALLAS_					0	0	0		ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	858.529495	857.522219	1.8755	0.0016101	-1.3338	-0.0011451	0.54162	0.000465	858.5282456209017	66.932	0.21399	67.257	67.127	67.341	0.32449	0.068337	-0.00040052	NaN	67.344	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455610			16876	6736	7963	8001							0.08775857045611701
LASLALLAS	9	Unmodified	_LASLALLAS_					0	0	0		ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	ENST00000471172.1_1_10:112590820-112591150:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	858.529495	857.522219	2.2647	0.0019443	-0.57449	-0.00049322	1.6902	0.0014511	858.5293837351401	65.738	0.306	67.137	66.941	67.247	1.3989	-0.051739	0.00025141	NaN	67.344	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1125600			16877	6736	7963	8001							0.08775857045611701
LASLIRMP	8	Unmodified	_LASLIRMP_					0	0	0		nc|ENSG00000156535|Q6YHK3-2|CD109;nc|ENSG00000156535|Q6YHK3-4|CD109;ENSG00000156535|ENST00000287097|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	nc|ENSG00000156535|Q6YHK3-2|CD109	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7699767947197	2	450.770406	899.526258	2.4701	0.0011135	0.66685	0.00030059	3.137	0.0014141	450.77061597893646	83.012	0.40815	84.652	84.384	84.792	1.6396					26	12	3	0	0	0	0.80889	1	34857	34857		26.341	0	1	2225500			16878	3452	7964	8002	19906	19906					0.07247623267687686
LASLRVMAL	9	Unmodified	_LASLRVMAL_					0	0	0		ENST00000316292.13_1_6:74230568-74230718:-|nuORF	ENST00000316292.13_1_6:74230568-74230718:-|nuORF	ENST00000316292.13_1_6:74230568-74230718:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2019531130791	3	325.200284	972.579022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.82	1	103	102.5	103.5	0.18066								0	0	0	0.42693	1	43270	43270		1.1933	0	1				16879	5831	7965	8003	19907	19907					0.09163581330483339
LASLTGGVLI	10	Unmodified	_LASLTGGVLI_					0	0	0		ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2960693240166	2	472.294768	942.574983	2.3116	0.0010918	-0.17396	-8.2162E-05	2.1376	0.0010096	472.2947879433586	42.767	0.3687	42.767	42.541	42.91	0					29	11	3	0	0	0	0.04351	1	17905	17905		81.613	7.1903	1	3881200			16880	3151	7966	8004	19908	19908					0.10139815108436778
LASLTGGVLI	10	Unmodified	_LASLTGGVLI_					0	0	0		ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2959472537041	2	472.294768	942.574983	2.4838	0.0011731	-0.7669	-0.0003622	1.7169	0.00081087	472.29439158284725	40.676	0.43877	42.002	41.771	42.21	1.3254					43	13	4	0	0	0	0.058389	3	17014	17014;17063;17103		92.822	11.209	1	17691000			16881	3151	7966	8004	19909;19910;19911	19909					0.10139815108436778
LASLTGGVLI	10	Unmodified	_LASLTGGVLI_					0	0	0		ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	ENSG00000146411|ENST00000275230|SLC2A12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	472.294768	942.574983	2.3156	0.0010936	-1.5667	-0.00073993	0.74893	0.00035372	472.2939552466058	40.237	0.49651	42.1	41.862	42.359	1.8624	0.048945	-0.00047769	NaN	92.822	41	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13000000			16882	3151	7966	8004							0.10139815108436778
LASPAPPLSV	10	Unmodified	_LASPAPPLSV_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000509566.1_1_4:844107-866085:-|nuORF;ENST00000515868.5_1_4:845337-862348:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	476.2796813845634	2	476.279118	950.543683	1.8827	0.00089669	-0.29654	-0.00014124	1.5861	0.00075545	476.27875575036165	67.634	0.34296	69.504	69.331	69.674	1.87					28	10	3	0	0	0	0.62746	1	28379	28379		21.747	2.4897	1	15402000			16883	4496	7967	8005	19912	19912					0.06643242074324007
LASPPLLLLI	10	Unmodified	_LASPPLLLLI_					0	0	0			REV__ENST00000535372.1_1_6:160182524-160183172:-|nuORF	REV__ENST00000535372.1_1_6:160182524-160183172:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.9057800173759	3	350.570483	1048.68962	-0.083283	-2.9197E-05	3.2849	0.0011516	3.2016	0.0011224	350.9062889709406	26.835	0.39662	28.106	27.778	28.174	1.2715					16	12	2	0	0	0	0.89803	1	11207	11207		0.15932	0	1	1364700	+		16884	13744	7968	8006	19913	19913					0.16722124590387466
LASQFLSL	8	Unmodified	_LASQFLSL_					0	0	0		ENST00000421826.6_2_6:27223302-27223911:+|nuORF	ENST00000421826.6_2_6:27223302-27223911:+|nuORF	ENST00000421826.6_2_6:27223302-27223911:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	878.4962646365166	1	878.498195	877.490919	2.018	0.0017728	0.7091	0.00062294	2.7271	0.0023957	878.4986405764945	61.852	0.3724	62.182	61.949	62.321	0.32974					19	11	2	0	0	0	0.77833	1	25961	25961		23.148	0	1	1328800			16885	6448	7969	8007	19914	19914					0.04727284011528354
LASRCFGK	8	Unmodified	_LASRCFGK_					0	0	0			REV__nc|ENSG00000239732|Q9NR96-4|TLR9	REV__nc|ENSG00000239732|Q9NR96-4|TLR9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2375366091728	2	441.23673	880.458907	0.29985	0.0001323	0.18989	8.3787E-05	0.48974	0.00021609	441.2370822258734	16.262	0.31767	16.262	16.119	16.437	0					27	9	4	0	0	0	0.74212	2	6733	6733;6781		26.341	0	1	4716200	+		16886	14547	7970	8008	19915;19916	19915					0.013895930567400683
LASRCFGK	8	Unmodified	_LASRCFGK_					0	0	0			REV__nc|ENSG00000239732|Q9NR96-4|TLR9	REV__nc|ENSG00000239732|Q9NR96-4|TLR9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	441.23673	880.458907	0.29985	0.0001323	0.18989	8.3787E-05	0.48974	0.00021609	441.2370822258734	16.262	0.31767	16.262	16.119	16.437	0	0.013662	8.9058E-05	NaN	26.341	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4716200	+		16887	14547	7970	8008							0.013895930567400683
LASRCFGK	8	Unmodified	_LASRCFGK_					0	0	0			REV__nc|ENSG00000239732|Q9NR96-4|TLR9	REV__nc|ENSG00000239732|Q9NR96-4|TLR9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	441.23673	880.458907	0.83807	0.00036979	-0.087871	-3.8772E-05	0.7502	0.00033102	441.2368913209655	16.104	0.24738	16.234	16.147	16.395	0.13022	-0.013662	-0.00015606	NaN	26.341	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487020	+		16888	14547	7970	8008							0.013895930567400683
LASRGTSTSG	10	Unmodified	_LASRGTSTSG_					0	0	0			REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7415649294853	2	468.740888	935.467223	3.2831	0.0015389	-1.5799	-0.00074058	1.7032	0.00079836	468.73999817374505	72.627	0.37055	73.957	73.762	74.133	1.3297					30	11	4	0	0	0	0.82659	1	30468	30468		9.3831	2.0939	1	2063100	+		16889	14610	7971	8009	19917	19917					-0.003091814929462089
LASRGTSTSG	10	Unmodified	_LASRGTSTSG_					0	0	0			REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	468.740888	935.467223	2.2366	0.0010484	-2.4274	-0.0011378	-0.19075	-8.9413E-05	468.74004871640744	74.249	0.35107	74.249	74.079	74.43	0	0.20247	-0.0003757	NaN	9.3831	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807350	+		16890	14610	7971	8009							-0.003091814929462089
LASRGTSTSG	10	Unmodified	_LASRGTSTSG_					0	0	0			REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	REV__RAB36|p.K89Sfs*110|1|0.09|ENSG00000100228|chr22:23146682-23146682|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	468.740888	935.467223	3.2831	0.0015389	-1.5799	-0.00074058	1.7032	0.00079836	468.73999817374505	72.627	0.37055	73.957	73.762	74.133	1.3297	-0.089141	0.00041874	NaN	9.3831	30	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2063100	+		16891	14610	7971	8009							-0.003091814929462089
LASVEMEYI	9	Unmodified	_LASVEMEYI_					0	0	0			REV__ENSG00000187658|ENST00000409999|C5orf52	REV__ENSG00000187658|ENST00000409999|C5orf52	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.3302490115166	2	527.759901	1053.50525	1.7283	0.00091215	-0.14933	-7.881E-05	1.579	0.00083334	527.7595406705823	66.479	0.15868	68.368	68.245	68.404	1.8889					6	4	2	0	0	0	0.10306	1	27852	27852		13.508	0	1	482450	+		16892	11542	7972	8010	19918	19918					-0.019364316224937284
LASVKKKK	8	Unmodified	_LASVKKKK_					0	0	0		ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.3145324587822	2	451.313295	900.612037	1.1529	0.00052031	2.4263	0.001095	3.5792	0.0016153	451.31422072004426	106.22	0.17194	106.22	106.13	106.31	0					24	8	4	0	0	0	0.89008	1	45272	45272		2.5775	0	1	99084000			16893	6173	7973	8011	19919	19919					0.1577553144485364
LASVKKKK	8	Unmodified	_LASVKKKK_					0	0	0		ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	ENST00000374279.3_1_9:114695413-114695467:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.3142272830009	2	451.313295	900.612037	3.3062	0.0014921	0.10704	4.8309E-05	3.4133	0.0015405	451.3131268026027	106.18	0.15957	106.24	106.15	106.31	0.05455					21	7	4	0	0	0	0.89008	1	45180	45180		2.5775	0	1	122860000			16894	6173	7973	8011	19920	19920					0.1577553144485364
LASVVIQVY	9	Unmodified	_LASVVIQVY_					0	0	0		ENST00000381596.1_1_20:1586507-1600590:-|nuORF	ENST00000381596.1_1_20:1586507-1600590:-|nuORF	ENST00000381596.1_1_20:1586507-1600590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2957641482353	2	496.294768	990.574983	1.6742	0.00083092	0.57605	0.00028589	2.2503	0.0011168	496.2946437452246	47.515	0.22081	47.515	47.371	47.592	0					11	6	2	0	0	0	0.49082	1	19838	19838		15.847	0	1	602530			16895	6235	7974	8012	19921	19921					0.07931815108440787
LASYDRYH	8	Unmodified	_LASYDRYH_					0	0	0			REV__ENSG00000196289|ENST00000419583|BECN2	REV__ENSG00000196289|ENST00000419583|BECN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7486450076103	2	512.745973	1023.47739	2.6765	0.0013724	4.2945	0.002202	6.971	0.0035743	512.7478306320274	75.15	0.28688	75.475	75.329	75.616	0.32464					18	8	3	0	0	0	0.88409	1	31429	31429		6.3541	0.59368	1	896640	+		16896	11625	7975	8013	19922	19922					-0.03340573767718524
LASYIGVS	8	Unmodified	_LASYIGVS_					0	0	0		tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.2238342165947	2	405.223811	808.433069	0.13867	5.6194E-05	0.25652	0.00010395	0.39519	0.00016014	405.2238652010899	17.593	0.27072	18.491	18.339	18.61	0.89794					26	11	3	0	0	0	0.54738	2	7303	7303;7351		44.407	6.2558	1	2300900			16897	17114	7976	8014	19923;19924	19923					0.021190220860944464
LASYIGVS	8	Unmodified	_LASYIGVS_					0	0	0		tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	tr|A0A7D6ZMU1|A0A7D6ZMU1_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	405.2238952517509	2	405.223811	808.433069	0.19549	7.9216E-05	-0.052491	-2.1271E-05	0.143	5.7945E-05	405.2238029460882	17.298	0.25004	18.6	18.472	18.722	1.3023					17	8	3	0	0	0	0.7006	1	7171	7171		30.225	5.5509	1	2771800			16898	17114	7976	8014	19925	19925					0.021190220860944464
LATALALTFV	10	Unmodified	_LATALALTFV_					0	0	0		nc|ENSG00000153093|Q9NUZ1-2|ACOXL;nc|ENSG00000153093|Q9NUZ1|ACOXL;ENSG00000153093|ENST00000439055|ACOXL	nc|ENSG00000153093|Q9NUZ1-2|ACOXL	nc|ENSG00000153093|Q9NUZ1-2|ACOXL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1019.614245593548	1	1019.61356	1018.60628	2.1401	0.0021821	-3.5788	-0.003649	-1.4387	-0.0014669	1019.6091951963909	67.126	0.19997	67.449	67.387	67.587	0.32269					10	6	2	0	0	0	0.32206	1	28114	28114		37.974	1.4678	1	566210			16899	3345	7977	8015	19926	19926					0.09772388142516775
LATALLATT	9	Unmodified	_LATALLATT_					0	0	0			REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	874.5303222537041	1	874.52441	873.517133	1.416	0.0012383	3.8776	0.0033911	5.2936	0.0046294	874.5282405627174	50.739	0.24019	52.133	52.016	52.257	1.3938					12	7	2	0	0	0	0.09539	1	21242	21242		50.855	6.448	1	1647700	+		16900	12141	7978	8016	19927	19927					0.07531553182980133
LATALLATT	9	Unmodified	_LATALLATT_					0	0	0			REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	874.52441	873.517133	1.7572	0.0015367	0.40935	0.00035799	2.1666	0.0018947	874.5245267428395	52.026	0.21797	52.351	52.248	52.466	0.32554	0.13187	-0.0013656	NaN	50.855	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404310	+		16901	12141	7978	8016							0.07531553182980133
LATALLATT	9	Unmodified	_LATALLATT_					0	0	0			REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	REV__ENST00000248948.3_1_22:24095052-24095358:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	874.52441	873.517133	1.416	0.0012383	3.8776	0.0033911	5.2936	0.0046294	874.5282405627174	50.739	0.24019	52.133	52.016	52.257	1.3938	-0.086419	0.0016675	NaN	50.855	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1647700	+		16902	12141	7978	8016							0.07531553182980133
LATDILMGV	9	Unmodified	_LATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	932.5175659060478	1	932.512131	931.504854	3.3499	0.0031238	0.78539	0.00073239	4.1353	0.0038562	932.5125862394202	70.729	0.34895	72.083	71.873	72.222	1.3536					17	10	2	0	0	0	0.046276	1	29660	29660		70.716	26.309	1	2737100			16903	1669	7979	8017	19928	19928					0.03636193448312497
LATDILMGV	9	Unmodified	_LATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.7590209841728	2	466.759704	931.504854	2.4146	0.001127	-0.42417	-0.00019799	1.9904	0.00092906	466.7593231919027	70.219	0.31881	72.057	71.849	72.167	1.8378					15	9	2	0	0	0	0.10722	1	29453	29453		46.921	20.037	1	1275200			16904	1669	7979	8017	19929	19929					0.03636193448312497
LATDILMGV	9	Unmodified	_LATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	932.5150024294853	1	932.512131	931.504854	2.2399	0.0020888	-0.012451	-1.1611E-05	2.2275	0.0020772	932.5114737016768	70.211	0.28197	72.049	71.946	72.228	1.8378					13	8	2	0	0	0	0.046276	1	29477	29477		70.716	19.86	1	978280			16905	1669	7979	8017	19930	19930					0.03636193448312497
LATDILMGV	9	Unmodified	_LATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	466.759704	931.504854	3.2728	0.0015276	0.65397	0.00030524	3.9267	0.0018328	466.76016450981496	70.751	0.22041	72.105	72.002	72.222	1.3536	0.023908	0.00049674	NaN	46.921	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	519230			16906	1669	7979	8017							0.03636193448312497
LATEALLAIN	10	Unmodified	_LATEALLAIN_					0	0	0			REV__ENSG00000196455|ENST00000356763|PIK3R4	REV__ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8045532107353	2	514.802957	1027.59136	1.9541	0.001006	1.5082	0.00077641	3.4623	0.0017824	514.8035876988729	53.23	0.34652	53.553	53.379	53.726	0.32283					24	10	3	0	0	0	0.70618	1	22357	22357		18.146	1.2041	1	2240100	+		16907	11635	7980	8018	19931	19931					0.0786689627452688
LATLPTMQATL	11	Unmodified	_LATLPTMQATL_					0	0	0			REV__ENST00000493489.1_1_13:113527819-113532532:+|nuORF	REV__ENST00000493489.1_1_13:113527819-113532532:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3257934451103	2	580.323199	1158.63185	2.8684	0.0016646	1.0848	0.00062955	3.9532	0.0022942	580.3237883134107	74.445	0.38324	76.241	76.051	76.434	1.7962					25	11	3	0	0	0	0.91768	1	31217	31217		8.7454	1.4562	1	1733300	+		16908	13447	7981	8019	19932	19932					0.05887494602620791
LATSLINFLK	10	Unmodified	_LATSLINFLK_					0	0	0			REV__tr|A0A7D6VTU7|A0A7D6VTU7_9CLOTCycliclactoneautoinducerpeptideOS=ClostridiumintestinaleOX=36845GN=HZF06_04195PE=4SV=1	REV__tr|A0A7D6VTU7|A0A7D6VTU7_9CLOTCycliclactoneautoinducerpeptideOS=ClostridiumintestinaleOX=36845GN=HZF06_04195PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3443481326103	2	560.342249	1118.66995	2.0203	0.0011321	-1.6303	-0.00091352	0.39003	0.00021855	560.3412148168601	88.384	0.55127	88.384	88.15	88.701	0					68	17	5	0	0	0	0.89803	1	36874	36874		1.6526	0	1	53316000	+		16909	15501	7982	8020	19933	19933					0.11535748579581195
LATTRDTL	8	Unmodified	_LATTRDTL_					0	0	0			REV__tr|A0A553SIR8|A0A553SIR8_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_15415PE=3SV=1	REV__tr|A0A553SIR8|A0A553SIR8_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_15415PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1205627322197	2	445.750724	889.486896	1.8064	0.00080521	-2.2759	-0.0010145	-0.46953	-0.00020929	445.749598855161	67.541	0.34174	69.411	69.238	69.58	1.87					17	10	2	0	0	0	2.3239	1	28279	28279		0	0	1	698460	+		16910	14864	7983	8021	19934	19934					0.03773194517805223
LAVAPLFRV	9	Unmodified	_LAVAPLFRV_					0	0	0			REV__ENST00000542015.1_1_12:6669877-6677084:-|nuORF	REV__ENST00000542015.1_1_12:6669877-6677084:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3145629763603	2	493.313295	984.612037	2.4531	0.0012101	-0.1515	-7.4739E-05	2.3016	0.0011354	493.3132086067642	70.06	0.48029	71.898	71.687	72.167	1.8378					35	14	3	0	0	0	0.1735	1	29404	29404		36.044	7.5574	1	6061000	+		16911	13785	7984	8022	19935	19935					0.11911531444854973
LAVCRFTV	8	Unmodified	_LAVCRFTV_					0	0	0			REV__ENST00000480100.3_1_9:140000303-140000768:+|nuORF	REV__ENST00000480100.3_1_9:140000303-140000768:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.7503845095634	2	454.754756	907.494958	3.201	0.0014557	-2.7941	-0.0012707	0.40687	0.00018503	454.75309659923613	74.703	0.43356	75.027	74.864	75.297	0.32464					21	13	3	0	0	0	0.87803	1	31336	31336		10.183	3.8293	1	1029000	+		16912	13342	7985	8023	19936	19936					0.03751050233586284
LAVCRFTV	8	Unmodified	_LAVCRFTV_					0	0	0			REV__ENST00000480100.3_1_9:140000303-140000768:+|nuORF	REV__ENST00000480100.3_1_9:140000303-140000768:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	454.754756	907.494958	3.201	0.0014557	-2.7941	-0.0012707	0.40687	0.00018503	454.75309659923613	74.703	0.43356	75.027	74.864	75.297	0.32464	0.059634	-0.0031888	NaN	10.183	21	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029000	+		16913	13342	7985	8023							0.03751050233586284
LAVCSELK	8	Unmodified	_LAVCSELK_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8887206912041	2	431.738771	861.462989	0.27776	0.00011992	-1.7395	-0.000751	-1.4617	-0.00063108	431.73749311948814	15.278	0.17137	16.175	16.082	16.253	0.89664					8	5	2	0	0	0	2.3239	1	6360	6360		5.7604	0	1	690570	+		16914	10768	7986	8024	19937	19937					0.026716377597722385
LAVESYLLL	9	Unmodified	_LAVESYLLL_					0	0	0			REV__tr|A0A553SJD5|A0A553SJD5_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16600PE=3SV=1	REV__tr|A0A553SJD5|A0A553SJD5_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16600PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8046447634697	2	510.802426	1019.5903	3.1025	0.0015848	0.89239	0.00045583	3.9949	0.0020406	510.8033287196041	79.253	0.34349	80.52	80.347	80.691	1.2668					23	10	3	0	0	0	0.20838	1	33265	33265		32.117	0	1	1347800	+		16915	14897	7987	8025	19938	19938					0.08128681905623125
LAVFPEYRVS	10	Unmodified	_LAVFPEYRVS_					0	0	0		nc|ENSG00000244274|Q9BQY9-4|DBNDD2	nc|ENSG00000244274|Q9BQY9-4|DBNDD2	nc|ENSG00000244274|Q9BQY9-4|DBNDD2	MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8239623904228	2	590.821681	1179.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.046	1	76.367	75.867	76.867	0.32163								0	0	0	0.65033	1	31803	31803		13.906	0	1				16916	8006	7988	8026	19939	19939					0.046179875401321624
LAVFPEYRVS	10	Unmodified	_LAVFPEYRVS_					0	0	0		nc|ENSG00000244274|Q9BQY9-4|DBNDD2	nc|ENSG00000244274|Q9BQY9-4|DBNDD2	nc|ENSG00000244274|Q9BQY9-4|DBNDD2	MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8220092654228	2	590.821681	1179.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.175	1	76.497	75.997	76.997	0.32163								0	0	0	0.65539	1	31859	31859		9.3831	0	1				16917	8006	7988	8026	19940	19940					0.046179875401321624
LAVFRFKVLIL	11	Unmodified	_LAVFRFKVLIL_					0	0	0		ENST00000471550.1_1_7:38247105-38254853:+|nuORF;nc|ENSG00000010270|O95772-2|STARD3NL;ENSG00000010270|ENST00000009041|STARD3NL	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	ENST00000471550.1_1_7:38247105-38254853:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	331.2594482302666	4	330.470692	1317.85366	1.1575	0.00038251	1.258	0.00041572	2.4154	0.00079822	330.4711208150564	46.874	0.99236	47.205	46.792	47.785	0.33034					80	32	3	0	0	0	0.14606	1	19840	19840		0	0	1	1010000			16918	547	7989	8027	19941	19941					0.20745142081136692
LAVIEKSI	8	Unmodified	_LAVIEKSI_					0	0	0		tr|A0A7D7A1Z6|A0A7D7A1Z6_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17580PE=4SV=1	tr|A0A7D7A1Z6|A0A7D7A1Z6_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17580PE=4SV=1	tr|A0A7D7A1Z6|A0A7D7A1Z6_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17580PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7772399783134	2	436.776211	871.537869	2.0999	0.0009172	0.25695	0.00011223	2.3569	0.0010294	436.7764277644715	76.888	0.34953	78.655	78.419	78.768	1.7672					17	10	2	0	0	0	0.87106	1	32288	32288		14.582	0	1	748250			16919	17248	7990	8028	19942	19942					0.09696143562666748
LAVIFLSNK	9	Unmodified	_LAVIFLSNK_					0	0	0			REV__tr|A0A7D6ZW16|A0A7D6ZW16_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16010PE=4SV=1	REV__tr|A0A7D6ZW16|A0A7D6ZW16_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8133727908134	2	502.810585	1003.60662	2.1307	0.0010713	-0.10736	-5.3982E-05	2.0234	0.0010174	502.811400457019	47.95	0.18618	49.338	49.241	49.427	1.388					7	5	2	0	0	0	0.64949	1	20071	20071		9.3474	0	1	489090	+		16920	15740	7991	8029	19943	19943					0.10495807862366746
LAVLCHSLL	9	Unmodified	_LAVLCHSLL_					0	0	0			REV__ENSG00000181656|ENST00000315033|GPR88	REV__ENSG00000181656|ENST00000315033|GPR88	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2825500369072	2	484.783513	967.552473	1.9029	0.00092251	-0.84761	-0.00041091	1.0553	0.0005116	484.7838532242083	46.753	0.58195	48.728	48.384	48.966	1.9754					31	18	2	0	0	0	0.66839	1	19480	19480		8.5933	2.2392	1	1142000	+		16921	11329	7992	8030	19944	19944					0.06739892439168216
LAVNLTRVL	9	Unmodified	_LAVNLTRVL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B;nc|ENSG00000143303|Q96FB5-2|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8213683962822	2	499.821484	997.628415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.058	1	57.468	56.968	57.968	1.4099								0	0	0	0.00087428	1	23492	23492		99.755	39.366	1				16922	3022	7993	8031	19945	19945					0.1295061261095043
LAVNLTRVL	9	Unmodified	_LAVNLTRVL_					0	0	0		ENSG00000143303|ENST00000368216|METTL25B;nc|ENSG00000143303|Q96FB5-2|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	ENSG00000143303|ENST00000368216|METTL25B	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.8214904665947	2	499.821484	997.628415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.512	1	57.48	56.98	57.98	1.9684								0	0	0	0.092123	1	23278	23278		36.044	12.896	1				16923	3022	7993	8031	19946	19946					0.1295061261095043
LAVPFHIR	8	Unmodified	_LAVPFHIR_					0	0	0			REV__chr1:53047266-53047858|136|16.78|0.36|5.56|+|2|TE_info:MLT1E1A,MLT1E1A_dup45,ERVL-MaLR,LTR,donor,-,53046852,53047266|None,SCP2|3	REV__chr1:53047266-53047858|136|16.78|0.36|5.56|+|2|TE_info:MLT1E1A,MLT1E1A_dup45,ERVL-MaLR,LTR,donor,-,53046852,53047266|None,SCP2|3	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1962158083916	3	318.19575	951.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.867	1	56.188	55.688	56.688	0.32088								0	0	0	1.0178	1	23394	23394		1.8442	0	1		+		16924	8223	7994	8032	19947	19947					0.08770091613564546
LAVPFHIR	8	Unmodified	_LAVPFHIR_					0	0	0			REV__chr1:53047266-53047858|136|16.78|0.36|5.56|+|2|TE_info:MLT1E1A,MLT1E1A_dup45,ERVL-MaLR,LTR,donor,-,53046852,53047266|None,SCP2|3	REV__chr1:53047266-53047858|136|16.78|0.36|5.56|+|2|TE_info:MLT1E1A,MLT1E1A_dup45,ERVL-MaLR,LTR,donor,-,53046852,53047266|None,SCP2|3	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1964904665947	3	318.19575	951.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.199	1	56.52	56.02	57.02	0.32103								0	0	0	1.0178	1	23548	23548		1.6526	0	1		+		16925	8223	7994	8032	19948	19948					0.08770091613564546
LAVPRLPAR	9	Unmodified	_LAVPRLPAR_					0	0	0		ENST00000216039.9_1_22:39096389-39096641:-|nuORF;ENST00000490169.1_1_22:39096389-39097318:-|nuORF;ENST00000493939.1_1_22:39096389-39096924:-|nuORF	ENST00000216039.9_1_22:39096389-39096641:-|nuORF	ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	496.5715209841728	2	496.821818	991.629084	2.3956	0.0011902	-2.3219	-0.0011536	0.073709	3.662E-05	496.82060576514556	44.851	1.2376	45.177	44.84	46.078	0.32674					56	41	2	0	0	0	0.11837	1	18882	18882		7.9102	0	1	950790			16926	5517	7995	8033	19949	19949					0.13293452050652377
LAVPRLPAR	9	Unmodified	_LAVPRLPAR_					0	0	0		ENST00000216039.9_1_22:39096389-39096641:-|nuORF;ENST00000490169.1_1_22:39096389-39097318:-|nuORF;ENST00000493939.1_1_22:39096389-39096924:-|nuORF	ENST00000216039.9_1_22:39096389-39096641:-|nuORF	ENST00000216039.9_1_22:39096389-39096641:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	496.5711242556572	2	496.821818	991.629084	1.7741	0.00088139	-2.2563	-0.001121	-0.48222	-0.00023958	496.8207092466822	42.665	1.0345	44.587	44.227	45.262	1.9211					41	33	2	0	0	0	0.11819	1	17967	17967		4.756	0	1	2203700			16927	5517	7995	8033	19950	19950					0.13293452050652377
LAVQMEIAK	9	Unmodified	_LAVQMEIAK_					0	0	0			REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.7874938845634	2	501.786253	1001.55795	1.6227	0.00081423	-1.3354	-0.00067008	0.28726	0.00014414	501.786602342569	39.482	0.43484	39.482	39.265	39.7	0					40	13	4	0	0	0	0.098163	2	16558	16509;16558		49.933	3.912	1	7596400	+		16928	15067	7996	8034	19951;19952	19952					0.05723571230964808
LAVQMEIAK	9	Unmodified	_LAVQMEIAK_					0	0	0			REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.7872192263603	2	501.786253	1001.55795	2.1419	0.0010748	0.36291	0.00018211	2.5048	0.0012569	501.78652644908567	38.949	0.33898	39.257	39.06	39.399	0.30857					17	10	2	0	0	0	0.1109	1	16375	16375		45.7	11.298	1	2519000	+		16929	15067	7996	8034	19953	19953					0.05723571230964808
LAVQMEIAK	9	Unmodified	_LAVQMEIAK_					0	0	0			REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7867004275322	2	501.786253	1001.55795	0.47941	0.00024056	1.4309	0.000718	1.9103	0.00095856	501.78685330620755	37.048	0.17732	38.866	38.769	38.946	1.8182					11	6	2	0	0	0	0.25667	1	15548	15548		27.629	4.8925	1	828520	+		16930	15067	7996	8034	19954	19954					0.05723571230964808
LAVQMEIAK	9	Unmodified	_LAVQMEIAK_					0	0	0			REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	REV__tr|A0A553SNY0|A0A553SNY0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_25365PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	501.786253	1001.55795	2.1419	0.0010748	0.36291	0.00018211	2.5048	0.0012569	501.78652644908567	38.949	0.33898	39.257	39.06	39.399	0.30857	-0.11234	0.00032476	NaN	49.933	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2519000	+		16931	15067	7996	8034							0.05723571230964808
LAVSVLGG	8	Unmodified	_LAVSVLGG_					0	0	0		ENST00000567948.1_2_15:55611123-55611258:-|nuORF;ENST00000563262.5_1_15:55606344-55611258:-|nuORF	ENST00000567948.1_2_15:55611123-55611258:-|nuORF	ENST00000567948.1_2_15:55611123-55611258:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2214843630791	2	358.221072	714.42759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.405	1	16.232	15.732	16.732	0.82643								0	0	0	1.0178	1	6402	6402		13.508	0	1				16932	7342	7997	8035	19955	19955					0.05895343294298527
LAVTDGKKL	9	Unmodified	_LAVTDGKKL_					0	0	0			REV__ENSG00000113396|ENST00000262462|SLC27A6	REV__ENSG00000113396|ENST00000262462|SLC27A6	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7927429080009	2	472.792392	943.570232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.005	1	59.974	59.474	60.474	1.969								0	0	0	0.3709	1	24332	24332		11.64	0	1		+		16933	9384	7998	8036	19956	19956					0.0961893096566655
LAVTIPVIIL	10	Unmodified	_LAVTIPVIIL_					0	0	0		tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2444946169853	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	1	8221	8221		0.15932	0	1	143590000			16934	16110	7999	8037	19957	19957					0.18194411107424457
LAVTIPVIIL	10	Unmodified	_LAVTIPVIIL_					0	0	0		tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	tr|A0A553SGH3|A0A553SGH3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10835PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2432128787041	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.174	1	20.697	20.197	21.197	1.5237								0	0	0	0.66254	1	7971	7971		0.15932	0	1				16935	16110	7999	8037	19958	19958					0.18194411107424457
LAVTSPPTL	9	Unmodified	_LAVTSPPTL_					0	0	0		nc|ENSG00000196091|Q00872-5|MYBPC1;nc|ENSG00000196091|Q00872-3|MYBPC1;nc|ENSG00000196091|Q00872-9|MYBPC1;nc|ENSG00000196091|Q00872-8|MYBPC1;nc|ENSG00000196091|Q00872-7|MYBPC1;nc|ENSG00000196091|Q00872|MYBPC1;nc|ENSG00000196091|Q00872-10|MYBPC1;nc|ENSG00000196091|Q00872-2|MYBPC1;ENSG00000196091|ENST00000361466|MYBPC1;nc|ENSG00000196091|Q00872-6|MYBPC1;MYBPC1|p.Q927Pfs*4|1|0.04|ENSG00000196091|chr12:101673611-101673612|-/A|frameshift_variant	nc|ENSG00000196091|Q00872-5|MYBPC1	nc|ENSG00000196091|Q00872-5|MYBPC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.7672607302666	2	449.765843	897.517133	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.67	1	58.67	58.17	59.17	0								0	0	0	0.40188	1	24469	24469		8.5933	0	1				16936	4911	8000	8038	19959	19959					0.06427553183004875
LAVTVTSLCI	10	Unmodified	_LAVTVTSLCI_					0	0	0		ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2958557009697	2	510.293911	1018.57327	1.9655	0.001003	2.7239	0.00139	4.6894	0.002393	510.2954540205666	42.881	0.41031	44.221	44.014	44.425	1.3399					28	12	3	0	0	0	0.41677	1	17988	17988		32.305	1.6689	1	4084100			16937	4316	8001	8039	19960	19960					0.06472438028151828
LAVTVTSLCI	10	Unmodified	_LAVTVTSLCI_					0	0	0		ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2949401736259	2	510.293911	1018.57327	1.9893	0.0010151	1.4037	0.00071627	3.3929	0.0017314	510.29472009921005	42.259	0.34158	44.181	44.011	44.353	1.9211					26	10	3	0	0	0	0.28892	1	17729	17729		39.957	5.5556	1	4411300			16938	4316	8001	8039	19961	19961					0.06472438028151828
LAVVAGVAAE	10	Unmodified	_LAVVAGVAAE_					0	0	0		nc|ENSG00000182544|Q6N075-2|MFSD5;ENSG00000182544|ENST00000329548|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	899.5219604372978	1	899.519659	898.512382	1.7214	0.0015484	1.7251	0.0015518	3.4465	0.0031002	899.5204837203146	43.318	0.30724	43.318	43.119	43.427	0					12	9	2	0	0	0	0.10239	1	18094	18094		63.563	6.0915	1	1002500			16939	7941	8002	8040	19962	19962					0.05906669040234647
LAVVAGVAAE	10	Unmodified	_LAVVAGVAAE_					0	0	0		nc|ENSG00000182544|Q6N075-2|MFSD5;ENSG00000182544|ENST00000329548|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	899.5259887576103	1	899.519659	898.512382	1.8452	0.0016598	-0.85026	-0.00076483	0.99495	0.00089497	899.5189784811595	42.9	0.28633	43.222	43.064	43.35	0.32163					18	9	2	0	0	0	0.10239	2	18037	17991;18037		63.563	6.0915	1	1664500			16940	7941	8002	8040	19963;19964	19964					0.05906669040234647
LAVVAGVAAE	10	Unmodified	_LAVVAGVAAE_					0	0	0		nc|ENSG00000182544|Q6N075-2|MFSD5;ENSG00000182544|ENST00000329548|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	nc|ENSG00000182544|Q6N075-2|MFSD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2646362185478	2	450.263468	898.512382	2.4492	0.0011028	0.17307	7.7928E-05	2.6223	0.0011807	450.26353986702196	41.433	0.51146	42.758	42.524	43.035	1.3254					33	15	3	0	0	0	0.23727	2	17391	17391;17432		44.407	2.3125	1	4748900			16941	7941	8002	8040	19965;19966	19965					0.05906669040234647
LAVVEPNQL	9	Unmodified	_LAVVEPNQL_					0	0	0			REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7810851931572	2	491.782025	981.549496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.849	1	78.143	77.643	78.643	1.2938								0	0	0	0.24103	1	32261	32261		23.148	0	1		+		16942	10732	8003	8041	19967	19967					0.05798340585999995
LAVVEPNQL	9	Unmodified	_LAVVEPNQL_					0	0	0			REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	REV__RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2848388552666	2	491.782025	981.549496	2.8831	0.0014178	1.8313	0.00090061	4.7144	0.0023184	491.78258144612266	76.179	0.72863	77.946	77.658	78.386	1.7672					48	22	3	0	0	0	0.34572	1	32012	32012		23.148	0	1	2864300	+		16943	10732	8003	8041	19968	19968					0.05798340585999995
LAVVVGPP	8	Unmodified	_LAVVVGPP_					0	0	0			REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	REV__nc|ENSG00000254122|Q9Y5F8-2|PCDHGB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2409240603447	2	376.239264	750.463976	1.4586	0.00054878	3.0092	0.0011322	4.4678	0.001681	376.2403846906749	39.71	0.58486	41.02	40.715	41.3	1.3102					39	19	3	0	0	0	0.89176	1	16691	16691		0.79363	0	1	3495900	+		16944	11962	8004	8042	19969	19969					0.07876220191008088
LAWCVGITII	10	Unmodified	_LAWCVGITII_					0	0	0		tr|A0A553SU15|A0A553SU15_NIACITransportpermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_06050PE=3SV=1	tr|A0A553SU15|A0A553SU15_NIACITransportpermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_06050PE=3SV=1	tr|A0A553SU15|A0A553SU15_NIACITransportpermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_06050PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8077880740166	2	544.81227	1087.60999	1.0459	0.00056981	2.114	0.0011518	3.1599	0.0017216	544.813452967798	55.932	0.71544	57.901	57.618	58.334	1.9684					60	23	4	0	0	0	0.3543	1	23349	23349		36.044	1.1121	1	10305000			16945	16677	8005	8043	19970	19970					0.06968734644715369
LAWEHERF	8	Unmodified	_LAWEHERF_					0	0	0		nc|ENSG00000125912|Q969V3-2|NCLN;ENSG00000125912|ENST00000246117|NCLN	nc|ENSG00000125912|Q969V3-2|NCLN	nc|ENSG00000125912|Q969V3-2|NCLN	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2737304568291	2	544.269616	1086.52468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.212	1	99.409	98.909	99.909	0.19767								0	0	0	1.0178	1	41766	41766		15.847	4.2069	1				16946	2291	8006	8044	19971	19971					-0.015122944967288277
LAWKTELM	8	Unmodified	_LAWKTELM_					0	0	0			REV__CON__Q9DCV7	REV__CON__Q9DCV7	MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2711059451103	2	496.267696	990.520839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.412	1	74.73	74.23	75.23	1.318								0	0	0	1.0178	1	30808	30808		14.582	1.0738	1		+	+	16947	8400	8007	8045	19972	19972					0.025198996852054734
LAWLGRRAI	9	Unmodified	_LAWLGRRAI_					0	0	0			REV__ENST00000269142.9_1_18:23806426-23806600:+|nuORF	REV__ENST00000269142.9_1_18:23806426-23806600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3278076052666	2	528.327268	1054.63998	2.0264	0.0010706	0.35238	0.00018617	2.3788	0.0012568	528.3272730751684	53.92	0.24734	53.92	53.808	54.055	0					13	7	2	0	0	0	0.5697	1	22495	22495		12.532	0	1	978310	+		16948	12227	8008	8046	19973	19973					0.11484854424929836
LAWPLAAHLP	10	Unmodified	_LAWPLAAHLP_					0	0	0		ENST00000271332.3_1_1:109805800-109806782:+|nuORF	ENST00000271332.3_1_1:109805800-109806782:+|nuORF	ENST00000271332.3_1_1:109805800-109806782:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3196288943291	2	544.816202	1087.61785	1.4953	0.00081465	2.7728	0.0015107	4.2681	0.0023253	545.3176531865614	68.729	1.0797	70.582	70.056	71.136	1.853					44	34	2	0	0	0	0.56346	1	28841	28841		24.674	5.4169	1	2821900			16949	5677	8009	8047	19974	19974					0.07754629956502868
LAWVSLIIP	9	Unmodified	_LAWVSLIIP_					0	0	0			REV__tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	REV__tr|A0A553SLN3|A0A553SLN3_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_20990PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3185302615166	2	506.315503	1010.61645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.512	1	41.829	41.329	42.329	0.31683								0	0	0	0.42693	1	17436	17436		2.3027	0	1		+		16950	14990	8010	8048	19975	19975					0.11156995867759179
LAWVWLTL	8	Unmodified	_LAWVWLTL_					0	0	0			REV__nc|ENSG00000284730|P0DPE3|TMDD1	REV__nc|ENSG00000284730|P0DPE3|TMDD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2932617068291	2	501.294571	1000.57459	2.2805	0.0011432	-1.8365	-0.00092063	0.44403	0.00022259	501.2942722930258	67.506	0.28111	67.829	67.683	67.964	0.32269					13	8	2	0	0	0	0.87106	1	28309	28309		14.582	1.0738	1	888500	+		16951	14566	8011	8049	19976	19976					0.07432440179218247
LAYIHLIEF	9	Unmodified	_LAYIHLIEF_					0	0	0		nc|ENSG00000133858|O60293-2|ZFC3H1;ENSG00000133858|ENST00000378743|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8153564333916	2	559.815867	1117.61718	3.108	0.0017399	-1.5296	-0.00085632	1.5784	0.0008836	559.8148561745564	74.866	0.34643	76.172	76.028	76.374	1.3063					27	10	3	0	0	0	0.061246	1	31417	31417		63.563	35.068	1	1973600			16952	2585	8012	8050	19977	19977					0.06307790516802925
LAYNEIITI	9	Unmodified	_LAYNEIITI_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3007079958916	2	525.297507	1048.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.029	1	72.37	71.87	72.87	1.3415								0	0	0	0.10193	1	29804	29804		34.102	6.4736	1				16953	5477	8013	8051	19978	19978					0.05811493900228015
LAYNEIITI	9	Unmodified	_LAYNEIITI_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2969238162041	2	525.297507	1048.58046	1.3957	0.00073314	-0.51425	-0.00027014	0.88141	0.000463	525.2975330491686	70.587	0.27245	72.425	72.26	72.532	1.8378					16	8	2	0	0	0	0.12174	1	29597	29597		42.095	4.1206	1	1646600			16954	5477	8013	8051	19979	19979					0.05811493900228015
LAYPDCAG	8	Unmodified	_LAYPDCAG_					0	0	0		ENSG00000105672|ENST00000402764|ETV2;nc|ENSG00000105672|O00321-2|ETV2	ENSG00000105672|ENST00000402764|ETV2	ENSG00000105672|ENST00000402764|ETV2	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1800109744072	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.995	1	49.995	49.495	50.495	0								0	0	0	1.0178	1	20862	20862		0.79363	0	1				16955	1532	8014	8052	19980	19980					-0.06929770233841737
LAYPDKLVM	9	Unmodified	_LAYPDKLVM_					0	0	0		ENST00000465942.1_1_13:46065604-46085992:+|nuORF;ENSG00000136152|ENST00000349995|COG3	ENST00000465942.1_1_13:46065604-46085992:+|nuORF	ENST00000465942.1_1_13:46065604-46085992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2895385622978	2	525.288628	1048.5627	1.7257	0.00090648	-0.97425	-0.00051176	0.75144	0.00039472	525.2887090925029	46.137	0.59627	47.512	47.116	47.712	1.3751					44	18	3	0	0	0	0.20671	1	19279	19279		32.305	6.9062	1	1595900			16956	2708	8015	8053	19981	19981					0.04036455373739045
LCAGCLKVIN	10	Unmodified	_LCAGCLKVIN_					0	0	0			REV__MAP3K7|p.Y93C|1|0.47|ENSG00000135341|chr6:90568577-90568577|T/C|missense_variant	REV__MAP3K7|p.Y93C|1|0.47|ENSG00000135341|chr6:90568577-90568577|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1900207400322	3	345.189279	1032.54601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105	1	105.16	104.66	105.66	0.15859								0	0	0	0.66141	1	44630	44630		2.086	0.63089	1		+		16957	14353	8016	8054	19982	19982					0.031036312161404567
LCFRDALPR	9	Unmodified	_LCFRDALPR_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|301|2|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|301|2|anti-sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|301|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	364.1974365115166	3	364.199054	1089.57533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.791	1	99.791	99.291	100.29	0								0	0	0	0.42693	1	41772	41772		1.1933	0	1				16958	7759	8017	8055	19983	19983					0.03412911556620202
LCLLKKKKKKS	11	Unmodified	_LCLLKKKKKKS_					0	0	0		ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	329.9755126833916	4	329.975713	1315.87375	0.31791	0.0001049	1.5048	0.00049656	1.8227	0.00060146	329.9760165156467	26.139	0.69019	26.401	26.144	26.834	0.26173					50	22	3	0	0	0	1.0402	1	10925	10925		0.094841	0.094841	1	2230700			16959	5957	8018	8056	19984	19984					0.22844569749418042
LCLLKKKKKKS	11	Unmodified	_LCLLKKKKKKS_					0	0	0		ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	329.9753600955009	4	329.975713	1315.87375	0.43561	0.00014374	0.77517	0.00025579	1.2108	0.00039953	329.9756600727532	28.293	0.91961	28.564	28.179	29.098	0.27119					59	29	3	0	0	0	1.0402	1	11766	11766		0.094841	0	1	654430			16960	5957	8018	8056	19985	19985					0.22844569749418042
LCLLKKKKKKS	11	Unmodified	_LCLLKKKKKKS_					0	0	0		ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	329.9767944216728	4	329.975713	1315.87375	0.11816	3.8991E-05	1.5223	0.00050234	1.6405	0.00054133	329.97622729835376	24.81	0.65505	26.051	25.763	26.418	1.241					66	21	4	0	0	0	1.0402	2	10350	10350;10396		0.094841	0.094841	1	2904300			16961	5957	8018	8056	19986;19987	19986					0.22844569749418042
LCLLKKKKKKS	11	Unmodified	_LCLLKKKKKKS_					0	0	0		ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	ENST00000344293.5_1_10:7866412-8006047:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	329.9778015017509	4	329.975713	1315.87375	0.028599	9.4368E-06	1.3602	0.00044882	1.3888	0.00045826	329.9760861413225	24.495	0.63558	26.18	25.907	26.542	1.6845					54	21	3	0	0	0	1.0402	3	10198	10198;10244;10322		0.094841	0.094841	1	2074200			16962	5957	8018	8056	19988;19989;19990	19988					0.22844569749418042
LCLVREWTRYW	11	Unmodified	_LCLVREWTRYW_					0	0	0			REV__ENST00000306100.9_1_4:163084864-163085137:-|nuORF	REV__ENST00000306100.9_1_4:163084864-163085137:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.9324828982353	3	508.930856	1523.77074	2.1729	0.0011059	3.1306	0.0015933	5.3036	0.0026992	508.93220310309033	53.202	0.38307	53.202	53.044	53.427	0					21	14	2	0	0	0	1.0366	1	22209	22209		0.40827	0	1	2646900	+		16963	12336	8019	8057	19991	19991					0.029804572908005866
LCPAAAGA	8	Unmodified	_LCPAAAGA_					0	0	0		ENST00000267984.3_1_15:81293841-81294147:+|nuORF	ENST00000267984.3_1_15:81293841-81294147:+|nuORF	ENST00000267984.3_1_15:81293841-81294147:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.7002136111259	2	337.170524	672.326496	-1.5152	-0.00051088	-0.18113	-6.107E-05	-1.6963	-0.00057195	337.1703564766575	56.164	0.42916	56.164	55.97	56.399	0					25	14	2	0	0	0	2.3239	1	23434	23434		0	0	1	4237300			16964	5663	8020	8058	19992	19992					-0.022774316800791894
LCPGKGTT	8	Unmodified	_LCPGKGTT_					0	0	0		SLC43A3|p.N229K|1|0.27|ENSG00000134802|chr11:57416655-57416655|A/T|missense_variant	SLC43A3|p.N229K|1|0.27|ENSG00000134802|chr11:57416655-57416655|A/T|missense_variant	SLC43A3|p.N229K|1|0.27|ENSG00000134802|chr11:57416655-57416655|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.0816223025322	2	388.702189	775.389824	-0.19249	-7.4823E-05	-2.737	-0.0010639	-2.9295	-0.0011387	388.70124152900337	67.661	0.40936	67.661	67.441	67.85	0					19	12	2	0	0	0	2.3239	1	28128	28128		0.79363	0	1	453030			16965	15961	8021	8059	19993	19993					-0.006854909628486894
LCPKLRTVP	9	Unmodified	_LCPKLRTVP_					0	0	0			REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2093994021416	3	342.8758	1025.60557	-1.6732	-0.00057371	-1.1971	-0.00041047	-2.8704	-0.00098418	342.8753197933501	35.57	0.34005	35.57	35.371	35.711	0					47	28	2	0	0	0	0.71759	1	14867	14867		6.6304	1.7334	1	11798000	+		16966	12915	8022	8060	19994	19994					0.09379270221802471
LCPKLRTVP	9	Unmodified	_LCPKLRTVP_					0	0	0			REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8760864138603	3	342.8758	1025.60557	-1.4852	-0.00050925	2.7048	0.00092743	1.2196	0.00041817	342.8765924607928	40.18	1.0974	40.18	39.544	40.642	0					99	34	4	0	0	0	0.83148	1	16878	16878		2.086	0.24177	1	8171300	+		16967	12915	8022	8060	19995	19995					0.09379270221802471
LCPKLRTVP	9	Unmodified	_LCPKLRTVP_					0	0	0			REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	343.2093994021416	3	342.8758	1025.60557	-1.6732	-0.00057371	-1.1971	-0.00041047	-2.8704	-0.00098418	342.8753197933501	35.57	0.34005	35.57	35.371	35.711	0					47	28	2	0	0	0	0.11611	1	14867	14867		6.6304	1.7334	1	11798000	+		16968	12915	8022	8060	19996	19996					0.09379270221802471
LCPKLRTVP	9	Unmodified	_LCPKLRTVP_					0	0	0			REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8750488162041	3	342.8758	1025.60557	-0.89696	-0.00030754	-1.3716	-0.00047028	-2.2685	-0.00077782	342.8752400954134	34.925	0.46817	36.2	35.962	36.43	1.2746					64	44	2	0	0	0	0.70577	2	14677	14639;14677		7.1017	2.5729	1	13272000	+		16969	12915	8022	8060	19997;19998	19998					0.09379270221802471
LCPKLRTVP	9	Unmodified	_LCPKLRTVP_					0	0	0			REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	REV__ENST00000409572.5_1_2:157186595-157198580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8749572634697	3	342.8758	1025.60557	0.31894	0.00010936	-3.1067	-0.0010652	-2.7878	-0.00095586	342.8746217455895	34.422	0.32555	36.244	36.106	36.431	1.8227					39	31	2	0	0	0	0.78661	1	14405	14405		3.8763	0.27984	1	18690000	+		16970	12915	8022	8060	19999	19999					0.09379270221802471
LCQWRRRQRRR	11	Unmodified	_LCQWRRRQRRR_					0	0	0		ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	ENST00000370332.5_1_1:92949124-92949509:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	807.4604369997978	2	807.46075	1612.90695	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.972	1	65.972	65.472	66.472	0								0	0	0	0.63775	1	27488	27488		0	0	1				16971	6111	8023	8061	20000	20000					0.12501009364677884
LCRLFRVF	8	Unmodified	_LCRLFRVF_					0	0	0		ENSG00000120162|ENST00000262244|MOB3B	ENSG00000120162|ENST00000262244|MOB3B	ENSG00000120162|ENST00000262244|MOB3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.3062621951103	2	527.304947	1052.59534	2.5619	0.0013509	-0.98079	-0.00051718	1.5811	0.00083371	527.3041630848196	83.761	0.42569	84.031	83.832	84.257	0.27029					33	13	3	0	0	0	0.89051	1	35107	35107		2.3027	0.24298	1	6594700			16972	2097	8024	8062	20001	20001					0.07114707287246347
LCRLFRVF	8	Unmodified	_LCRLFRVF_					0	0	0		ENSG00000120162|ENST00000262244|MOB3B	ENSG00000120162|ENST00000262244|MOB3B	ENSG00000120162|ENST00000262244|MOB3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3058349490166	2	527.304947	1052.59534	2.8469	0.0015012	-0.775	-0.00040866	2.0719	0.0010925	527.304410117222	82.672	0.36613	84.342	84.113	84.48	1.67					24	11	3	0	0	0	0.88587	1	34667	34667		5.2307	2.6532	1	3082100			16973	2097	8024	8062	20002	20002					0.07114707287246347
LCRRGLRRRAP	11	Unmodified	_LCRRGLRRRAP_					0	0	0			REV__ENST00000339560.9_1_19:14048664-14049262:-|nuORF	REV__ENST00000339560.9_1_19:14048664-14049262:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	339.2089111208916	4	339.20847	1352.80477	0.24751	8.3958E-05	1.11	0.00037651	1.3575	0.00046047	339.208304455372	37.478	0.87466	39.298	38.826	39.701	1.8202					60	32	3	0	0	0	1.0369	1	15695	15695		1.1098	0	1	2311800	+		16974	12490	8025	8063	20003	20003					0.14248343293093058
LCSKLFSF	8	Unmodified	_LCSKLFSF_					0	0	0		ENST00000367388.4_1_1:197886553-197886649:+|nuORF	ENST00000367388.4_1_1:197886553-197886649:+|nuORF	ENST00000367388.4_1_1:197886553-197886649:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7486755251884	2	472.749139	943.483725	0.82392	0.00038951	-1.6915	-0.00079967	-0.86762	-0.00041016	472.74811935352307	51.094	0.45612	52.487	52.287	52.743	1.3938					42	14	4	0	0	0	0.34211	1	21448	21448		67.344	3.1075	1	11509000			16975	6062	8026	8064	20004	20004					0.009722281394488164
LCSKLFSF	8	Unmodified	_LCSKLFSF_					0	0	0		ENST00000367388.4_1_1:197886553-197886649:+|nuORF	ENST00000367388.4_1_1:197886553-197886649:+|nuORF	ENST00000367388.4_1_1:197886553-197886649:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7474853396416	2	472.749139	943.483725	1.0738	0.00050762	-2.9086	-0.001375	-1.8349	-0.00086742	472.7474688735256	50.511	0.41946	52.486	52.277	52.697	1.9753					38	13	4	0	0	0	0.38289	1	21112	21112		57.471	11.45	1	11876000			16976	6062	8026	8064	20005	20005					0.009722281394488164
LCVCLPVP	8	Unmodified	_LCVCLPVP_					0	0	0			REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2286865115166	2	422.226985	842.439417	2.0013	0.00084501	2.9035	0.0012259	4.9048	0.002071	422.2281662842508	41.052	0.25642	42.945	42.8	43.056	1.8927					13	7	2	0	0	0	0.88958	1	17211	17211		2.8892	0	1	543430	+		16977	11926	8027	8065	20006	20006					0.011895007216139675
LCVCLPVP	8	Unmodified	_LCVCLPVP_					0	0	0			REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	422.226985	842.439417	2.1443	0.00090538	1.3595	0.00057403	3.5038	0.0014794	422.22739158811214	41.524	0.32231	42.849	42.65	42.973	1.3254	-0.047995	-0.00089687	NaN	2.8892	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541290	+		16978	11926	8027	8065							0.011895007216139675
LCVCLPVP	8	Unmodified	_LCVCLPVP_					0	0	0			REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	REV__nc|ENSG00000242515|Q9HAW8-2|UGT1A10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	422.226985	842.439417	2.0013	0.00084501	2.9035	0.0012259	4.9048	0.002071	422.2281662842508	41.052	0.25642	42.945	42.8	43.056	1.8927	0.047995	0.00040695	NaN	2.8892	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	543430	+		16979	11926	8027	8065							0.011895007216139675
LDAENNLK	8	Unmodified	_LDAENNLK_					0	0	0			REV__tr|A0A7D6ZUH8|A0A7D6ZUH8_9CLOTCCAtRNAnucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00175PE=3SV=1	REV__tr|A0A7D6ZUH8|A0A7D6ZUH8_9CLOTCCAtRNAnucleotidyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00175PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1724731326103	2	458.740357	915.46616	0.12976	5.9528E-05	-0.52234	-0.00023962	-0.39257	-0.00018009	458.7405824124347	13.32	0.34194	14.046	13.882	14.224	0.72639					16	10	2	0	0	0	2.3239	1	5502	5502		2.0598	0	1	1240100	+		16980	15720	8028	8066	20007	20007					0.00504604138131981
LDARWLIRFRL	11	Unmodified	_LDARWLIRFRL_					0	0	0			REV__ENST00000254742.6_1_4:4249611-4249728:-|nuORF	REV__ENST00000254742.6_1_4:4249611-4249728:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	729.9377319216728	2	729.938245	1457.86194	2.5745	0.0018792	-3.5209	-0.00257	-0.94641	-0.00069082	729.9356069423085	88.807	1.2093	89.03	88.406	89.615	0.2236					82	37	3	0	0	0	1.0391	1	37196	37196		1.1933	0.84271	1	1588700	+		16981	12155	8029	8067	20008	20008					0.15132089050416653
LDATLIGLNV	10	Unmodified	_LDATLIGLNV_					0	0	0			REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	REV__nc|ENSG00000110660|Q8IXU6-3|SLC35F2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.7530395388603	2	514.802957	1027.59136	1.6205	0.00083422	-3.5662	-0.0018359	-1.9457	-0.0010017	514.8013586627438	77.666	0.20506	79.418	79.29	79.495	1.7514					11	6	2	0	0	0	0.11298	1	32574	32574		37.974	0	1	740320	+		16982	9302	8030	8068	20009	20009					0.0786689627452688
LDAWLYNNRMS	11	Unmodified	_LDAWLYNNRMS_					0	0	0			REV__tr|A0A553SJX4|A0A553SJX4_NIACIPenicillin-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_17605PE=4SV=1	REV__tr|A0A553SJX4|A0A553SJX4_NIACIPenicillin-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_17605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	691.8322631716728	2	691.829711	1381.64487	1.9504	0.0013494	2.4159	0.0016714	4.3663	0.0030207	691.8312908981653	63.565	0.36498	64.979	64.753	65.118	1.4134					27	11	3	0	0	0	0.31168	2	26670	26621;26670		31.268	4.2654	1	3669300	+		16983	14922	8031	8069	20010;20011	20011					-0.030686742852822135
LDCCGDAWSFL	11	Unmodified	_LDCCGDAWSFL_					0	0	0		ENST00000498607.2_1_15:32976717-32984099:+|nuORF	ENST00000498607.2_1_15:32976717-32984099:+|nuORF	ENST00000498607.2_1_15:32976717-32984099:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.2553588747978	2	615.251917	1228.48928	2.595	0.0015966	-0.92967	-0.00057198	1.6653	0.0010246	615.2520220380017	76.236	0.6043	78.003	77.782	78.386	1.7672					51	18	4	0	0	0	0.90709	1	32007	32007		9.3831	0.63772	1	3033600			16984	6969	8032	8070	20012	20012					-0.11582461131047239
LDDFYRYEK	9	Unmodified	_LDDFYRYEK_					0	0	0		nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	624.2342407107353	2	624.798403	1247.58225	1.3641	0.00085232	-0.49857	-0.0003115	0.86558	0.00054081	624.8003785904729	42.991	0.26799	44.912	44.751	45.019	1.9211					11	8	2	0	0	0	0.11684	1	17993	17993		0.45834	0.10771	1	590390			16985	7905	8033	8071	20013	20013					-0.03163497081823152
LDDFYRYEK	9	Unmodified	_LDDFYRYEK_					0	0	0		nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	624.798403	1247.58225	1.6481	0.0010297	2.1347	0.0013337	3.7828	0.0023635	624.8004423629784	43.62	0.27532	44.974	44.795	45.071	1.3536	0.030773	0.00084408	NaN	0.45834	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	843920			16986	7905	8033	8071							-0.03163497081823152
LDDWTRNFNEK	11	Unmodified	_LDDWTRNFNEK_					0	0	0			REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.8974792361259	3	479.896757	1436.66844	1.5515	0.00074457	-0.32497	-0.00015595	1.2266	0.00058862	479.89675797966675	30.283	0.46029	30.283	30.099	30.56	0					39	14	4	0	0	0	0.91757	2	12665	12665;12720		8.7518	0.45093	1	3233900	+		16987	8432	8034	8072	20014;20015	20014					-0.03242537247092514
LDDWTRNFNEK	11	Unmodified	_LDDWTRNFNEK_					0	0	0			REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	479.896757	1436.66844	1.5515	0.00074457	-0.32497	-0.00015595	1.2266	0.00058862	479.89675797966675	30.283	0.46029	30.283	30.099	30.56	0	0.0031421	0.00017564	NaN	8.7518	39	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3233900	+		16988	8432	8034	8072							-0.03242537247092514
LDDWTRNFNEK	11	Unmodified	_LDDWTRNFNEK_					0	0	0			REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	REV__DDX43|p.I223R|1|0.07|ENSG00000080007|chr6:73405696-73405696|T/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	479.896757	1436.66844	1.9353	0.00092876	-0.64461	-0.00030935	1.2907	0.00061941	480.2307182643544	29.991	0.26717	30.277	30.115	30.383	0.2859	-0.0031421	-0.00028454	NaN	8.7518	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	691630	+		16989	8432	8034	8072							-0.03242537247092514
LDEALTRK	8	Unmodified	_LDEALTRK_					0	0	0		ENST00000487834.5_1_3:108281971-108308222:-|nuORF;nc|ENSG00000163507|Q8TCG1-2|CIP2A;ENSG00000163507|ENST00000295746|CIP2A	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	ENST00000487834.5_1_3:108281971-108308222:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	472.7704650759697	2	473.271824	944.529095	3.3601	0.0015902	-2.2741	-0.0010763	1.086	0.00051397	473.27114498564987	60.841	0.22517	62.261	62.184	62.409	1.4196					9	6	2	0	0	0	2.3239	1	25536	25536		23.148	0	1	713790			16990	3690	8035	8073	20016	20016					0.054611699261727153
LDEDDLIITI	10	Unmodified	_LDEDDLIITI_					0	0	0		tr|A0A553SNR3|A0A553SNR3_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25050PE=4SV=1	tr|A0A553SNR3|A0A553SNR3_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25050PE=4SV=1	tr|A0A553SNR3|A0A553SNR3_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25050PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3094970583916	2	580.308269	1158.60199	2.3695	0.001375	1.8859	0.0010944	4.2554	0.0024695	580.3090483329729	47.83	0.30864	49.806	49.649	49.958	1.976					14	9	2	0	0	0	0.77604	1	20071	20071		14.838	0.93222	1	831070			16991	16432	8036	8074	20017	20017					0.02902834138308208
LDEEKPCALF	10	Unmodified	_LDEEKPCALF_					0	0	0		nc|ENSG00000145808|Q8TE59|ADAMTS19;ENSG00000145808|ENST00000274487|ADAMTS19	nc|ENSG00000145808|Q8TE59|ADAMTS19	nc|ENSG00000145808|Q8TE59|ADAMTS19	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	389.5692016482353	3	388.858363	1163.55326	0.92592	0.00036005	-0.26011	-0.00010114	0.66582	0.00025891	388.85858292920835	57.056	0.32918	58.471	58.338	58.667	1.4145					18	10	3	0	0	0	0.12532	1	23921	23921		0.69767	0	1	1812300			16992	3124	8037	8075	20018	20018					-0.02197357702470981
LDEEMMEKV	9	Unmodified	_LDEEMMEKV_					0	0	0		tr|A0A0J1I9J4|A0A0J1I9J4_NIACImRNAinterferaseOS=NialliacirculansOX=1397GN=ndoAPE=3SV=1	tr|A0A0J1I9J4|A0A0J1I9J4_NIACImRNAinterferaseOS=NialliacirculansOX=1397GN=ndoAPE=3SV=1	tr|A0A0J1I9J4|A0A0J1I9J4_NIACImRNAinterferaseOS=NialliacirculansOX=1397GN=ndoAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.2543212771416	2	562.254125	1122.4937	2.0248	0.0011384	-0.60137	-0.00033812	1.4234	0.00080031	562.2537585441539	84.812	0.38303	84.812	84.589	84.972	0					34	11	4	0	0	0	0.82604	1	35384	35384		2.3027	0	1	1816400			16993	16035	8038	8076	20019	20019					-0.06264996708137005
LDEKGILCMT	10	Unmodified	_LDEKGILCMT_					0	0	0		tr|A0A553STY5|A0A553STY5_NIACIAlcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_05865PE=4SV=1	tr|A0A553STY5|A0A553STY5_NIACIAlcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_05865PE=4SV=1	tr|A0A553STY5|A0A553STY5_NIACIAlcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_05865PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.7816039919853	2	561.78031	1121.54607	1.2271	0.00068935	-0.0029679	-1.6673E-06	1.2241	0.00068768	561.7801903652074	71.678	0.25564	71.678	71.541	71.796	0					18	7	3	0	0	0	0.60583	1	29846	29846		22.736	0	1	1180600			16994	16673	8039	8077	20020	20020					-0.009844135745197491
LDELRDEGK	9	Unmodified	_LDELRDEGK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	358.8529235720634	3	358.852377	1073.5353	-0.3057	-0.0001097	-0.022154	-7.9499E-06	-0.32785	-0.00011765	358.85230633564333	12.073	0.15629	12.86	12.752	12.908	0.78751					6	4	2	0	0	0	0.23219	1	5006	5006		29.437	3.4165	1	510840		+	16995	340	8040	8078	20021	20021					0.001476433670404731
LDELRDEGK	9	Unmodified	_LDELRDEGK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	358.852377	1073.5353	-2.2165	-0.00079539	0.42439	0.00015229	-1.7921	-0.0006431	359.1875870616541	12.59	0.18632	12.59	12.498	12.685	0	-0.17566	0.0002868	NaN	29.437	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	178420		+	16996	340	8040	8078							0.001476433670404731
LDELRDEGK	9	Unmodified	_LDELRDEGK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	358.852377	1073.5353	-0.087923	-3.1551E-05	-0.68047	-0.00024419	-0.76839	-0.00027574	358.85203473282246	12.623	0.15522	12.712	12.648	12.803	0.089381	-0.053422	-0.00090264	NaN	29.437	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279170		+	16997	340	8040	8078							0.001476433670404731
LDELRDEGK	9	Unmodified	_LDELRDEGK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	358.852377	1073.5353	-1.4488	-0.00051991	1.4555	0.0005223	0.0066504	2.3865E-06	358.8529576191379	12.207	0.15884	12.901	12.789	12.948	0.69396	0.13485	0.0013968	NaN	29.437	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484310		+	16998	340	8040	8078							0.001476433670404731
LDFLVPAKHLL	11	Unmodified	_LDFLVPAKHLL_					0	0	0		nc|ENSG00000165801|Q8TER5-4|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;ENSG00000165801|ENST00000298694|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1959106326103	4	317.195862	1264.75434	-0.84596	-0.00026834	1.109	0.00035177	0.26304	8.3436E-05	317.19607346253804	34.372	0.36042	35.647	35.493	35.853	1.2746					86	42	3	0	0	0	1.0191	1	14481	14481		2.6312	0.19645	1	44543000			16999	3859	8041	8079	20022	20022					0.13255699396381715
LDFLVPAKHLL	11	Unmodified	_LDFLVPAKHLL_					0	0	0		nc|ENSG00000165801|Q8TER5-4|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;ENSG00000165801|ENST00000298694|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1961242556572	4	317.195862	1264.75434	0.14392	4.5652E-05	-0.18181	-5.7669E-05	-0.037885	-1.2017E-05	317.1957169498615	33.838	0.32571	35.661	35.601	35.927	1.8227					93	37	3	0	0	0	1.0191	1	14266	14266		2.6312	0.88896	1	51402000			17000	3859	8041	8079	20023	20023					0.13255699396381715
LDFLVPAKHLL	11	Unmodified	_LDFLVPAKHLL_					0	0	0		nc|ENSG00000165801|Q8TER5-4|ARHGEF40;nc|ENSG00000165801|Q8TER5-3|ARHGEF40;ENSG00000165801|ENST00000298694|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	nc|ENSG00000165801|Q8TER5-4|ARHGEF40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1957580447197	4	317.195862	1264.75434	1.3798	0.00043768	0.65917	0.00020909	2.039	0.00064677	317.195898574588	40.423	1.3769	42.286	41.584	42.961	1.8624					128	43	4	0	0	0	1.0191	1	17016	17016		2.6312	0.72486	1	5336400			17001	3859	8041	8079	20024	20024					0.13255699396381715
LDFPKTSLLE	10	Unmodified	_LDFPKTSLLE_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8260986208916	2	581.821347	1161.62814	1.6056	0.00093419	3.9503	0.0022984	5.556	0.0032326	581.8226720834168	68.619	0.63879	70.472	70.281	70.92	1.853					26	13	3	0	0	0	0.45795	1	28761	28761		29.841	0	1	2999200			17002	4871	8042	8080	20025	20025					0.053791481004282105
LDFWRQLWRVI	11	Unmodified	_LDFWRQLWRVI_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.6252014040947	3	511.289261	1530.84595	2.6563	0.0013582	-0.066013	-3.3752E-05	2.5903	0.0013244	511.2892732222051	44.239	0.32031	45.593	45.439	45.759	1.3536					24	9	3	0	0	0	1.0118	2	18535	18535;18576		3.0723	0.94916	1	2832700			17003	662	8043	8081	20026;20027	20026					0.10176382813529017
LDFWRQLWRVI	11	Unmodified	_LDFWRQLWRVI_					0	0	0		ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	ENSG00000041802|ENST00000265245|LSG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2892639040947	3	511.289261	1530.84595	2.4592	0.0012574	-1.0637	-0.00054386	1.3955	0.0007135	511.2888580746344	43.587	0.33272	45.531	45.368	45.701	1.9438					24	10	3	0	0	0	1.0357	2	18250	18250;18298		1.4551	0.94916	1	2729800			17004	662	8043	8081	20028;20029	20028					0.10176382813529017
LDGCYVVLI	9	Unmodified	_LDGCYVVLI_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7671081423759	2	497.767529	993.520504	1.4419	0.00071774	-3.6364	-0.0018101	-2.1944	-0.0010923	497.7660475135225	80.438	0.56882	82.155	81.908	82.477	1.7167					34	18	3	0	0	0	0.54523	1	33713	33713		13.508	0	1	3153700	+		17005	11044	8044	8082	20030	20030					0.02348479965360184
LDGCYVVLI	9	Unmodified	_LDGCYVVLI_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.767529	993.520504	2.8861	0.0014366	-4.6699	-0.0023245	-1.7838	-0.00088794	497.7654646915321	80.864	0.39246	82.097	81.923	82.316	1.2332	-0.04641	-0.00047492	NaN	13.508	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2494400	+		17006	11044	8044	8082							0.02348479965360184
LDGCYVVLI	9	Unmodified	_LDGCYVVLI_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.767529	993.520504	1.4419	0.00071774	-3.6364	-0.0018101	-2.1944	-0.0010923	497.7660475135225	80.438	0.56882	82.155	81.908	82.477	1.7167	0.011536	0.00055401	NaN	13.508	34	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3153700	+		17007	11044	8044	8082							0.02348479965360184
LDGKEYDIYV	10	Unmodified	_LDGKEYDIYV_					0	0	0		ENSG00000196083|ENST00000447382|IL1RAP;nc|ENSG00000196083|Q9NPH3-5|IL1RAP	ENSG00000196083|ENST00000447382|IL1RAP	ENSG00000196083|ENST00000447382|IL1RAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8026611208916	2	607.800611	1213.58667	4.3984	0.0026734	-1.34	-0.00081442	3.0585	0.001859	607.799675763878	87.305	0.71542	88.397	88.21	88.926	1.0918					41	22	3	0	0	0	0.65659	1	36838	36838		20.415	1.1575	1	1582400			17008	4910	8045	8083	20031	20031					-0.011580326589182732
LDHCTNRCF	9	Unmodified	_LDHCTNRCF_					0	0	0			REV__ENSG00000283473|ENST00000640551|FAM240A	REV__ENSG00000283473|ENST00000640551|FAM240A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7370483279228	2	554.736768	1107.45898	2.658	0.0014745	-2.6964	-0.0014958	-0.038415	-2.131E-05	554.7349415423315	75.12	0.3427	76.902	76.76	77.103	1.7817					26	10	3	0	0	0	0.61249	1	31494	31494		10.824	0.64053	1	2355800	+		17009	12032	8046	8084	20032	20032					-0.09044775005600059
LDHKRPLI	8	Unmodified	_LDHKRPLI_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14;ENST00000475640.1_1_3:122437249-122439770:+|nuORF	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3069640994072	2	496.306001	990.597449	2.9857	0.0014818	-2.0616	-0.0010232	0.92405	0.00045861	496.3050774301059	65.218	0.71728	66.617	66.193	66.91	1.3989					35	22	2	0	0	0	0.86202	1	27389	27389		15.768	3.2367	1	4623100			17010	4271	8047	8085	20033	20033					0.10177459296698999
LDIQKDYKL	9	Unmodified	_LDIQKDYKL_					0	0	0			REV__ENST00000482262.1_1_3:51425158-51426517:+|nuORF	REV__ENST00000482262.1_1_3:51425158-51426517:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3229858279228	2	568.321514	1134.62847	2.6698	0.0015173	0.41296	0.00023469	3.0828	0.001752	568.321851525574	69.841	0.34528	71.194	70.99	71.336	1.3536					29	10	4	0	0	0	0.37357	1	29298	29298		21.747	1.293	1	3591500	+		17011	10266	8048	8086	20034	20034					0.06654567820260127
LDISGDRGVL	10	Unmodified	_LDISGDRGVL_					0	0	0		FKBP6|p.T80Gfs*12|1|0.11|ENSG00000077800|chr7:73329421-73329422|-/GGGGCGCACCAGGCCGAAGGCTC|frameshift_variant;nc|ENSG00000077800|O75344-3|FKBP6;nc|ENSG00000077800|O75344-2|FKBP6;ENSG00000077800|ENST00000252037|FKBP6	FKBP6|p.T80Gfs*12|1|0.11|ENSG00000077800|chr7:73329421-73329422|-/GGGGCGCACCAGGCCGAAGGCTC|frameshift_variant	FKBP6|p.T80Gfs*12|1|0.11|ENSG00000077800|chr7:73329421-73329422|-/GGGGCGCACCAGGCCGAAGGCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2952758669853	2	522.787838	1043.56112	1.3576	0.00070972	4.1854	0.0021881	5.543	0.0028978	522.7895116823604	70.545	0.33292	72.383	72.228	72.561	1.8378					26	10	3	0	0	0	0.47063	1	29567	29567		29.082	3.6823	1	5545700			17012	966	8049	8087	20035	20035					0.04108537609340601
LDISPNIAAAV	11	Unmodified	_LDISPNIAAAV_					0	0	0		tr|A0A553SGY4|A0A553SGY4_NIACIGlycosyltransferasefamily8proteinOS=NialliacirculansOX=1397GN=CEQ21_11830PE=4SV=1	tr|A0A553SGY4|A0A553SGY4_NIACIGlycosyltransferasefamily8proteinOS=NialliacirculansOX=1397GN=CEQ21_11830PE=4SV=1	tr|A0A553SGY4|A0A553SGY4_NIACIGlycosyltransferasefamily8proteinOS=NialliacirculansOX=1397GN=CEQ21_11830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3091918826103	2	542.305864	1082.59717	2.0465	0.0011098	2.8324	0.001536	4.8789	0.0026458	542.3075298946252	83.273	0.36726	83.273	83.045	83.412	0					26	11	3	0	0	0	0.84637	1	34655	34655		13.042	0.80181	1	2273800			17013	16128	8050	8088	20036	20036					0.05917994786159397
LDITLQVIM	9	Unmodified	_LDITLQVIM_					0	0	0			REV__tr|A0A553SKV4|A0A553SKV4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19355PE=4SV=1	REV__tr|A0A553SKV4|A0A553SKV4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1045.593310534954	1	1045.59619	1044.58892	3.2608	0.0034095	-3.4414	-0.0035983	-0.18062	-0.00018886	1045.5934559637465	61.267	0.21772	63.225	63.119	63.337	1.9571					9	6	2	0	0	0	0.22519	1	25722	25722		30.225	0	1	835860	+		17014	14968	8051	8089	20037	20037					0.06840724545190824
LDITLQVIM	9	Unmodified	_LDITLQVIM_					0	0	0			REV__tr|A0A553SKV4|A0A553SKV4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19355PE=4SV=1	REV__tr|A0A553SKV4|A0A553SKV4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19355PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1045.59619	1044.58892	3.2608	0.0034095	-3.4414	-0.0035983	-0.18062	-0.00018886	1045.5934559637465	61.267	0.21772	63.225	63.119	63.337	1.9571	0.0011024	0.0010303	NaN	30.225	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	835860	+		17015	14968	8051	8089							0.06840724545190824
LDIYMEQRCCR	11	Unmodified	_LDIYMEQRCCR_					0	0	0			REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	715.8235961794853	2	715.322882	1428.63121	1.8656	0.0013345	-2.7859	-0.0019928	-0.92028	-0.0006583	715.3212007692197	72.064	0.34506	72.064	71.86	72.206	0					15	10	2	0	0	0	0.92747	1	30030	30030		8.1555	4.559	1	860860	+		17016	10223	8052	8090	20038	20038					-0.06595991380368105
LDIYMEQRCCR	11	Unmodified	_LDIYMEQRCCR_					0	0	0			REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	715.322882	1428.63121	1.8656	0.0013345	-2.7859	-0.0019928	-0.92028	-0.0006583	715.3212007692197	72.064	0.34506	72.064	71.86	72.206	0	0.018128	0.00056837	NaN	8.1555	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	860860	+		17017	10223	8052	8090							-0.06595991380368105
LDIYMEQRCCR	11	Unmodified	_LDIYMEQRCCR_					0	0	0			REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	715.322882	1428.63121	1.6426	0.001175	-2.8557	-0.0020427	-1.2131	-0.00086772	715.320549810015	71.605	0.31681	71.928	71.784	72.101	0.32359	-0.11726	0.00046853	NaN	8.1555	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	876920	+		17018	10223	8052	8090							-0.06595991380368105
LDIYMEQRCCR	11	Unmodified	_LDIYMEQRCCR_					0	0	0			REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	715.322882	1428.63121	2.5602	0.0018314	-5.6106	-0.0040134	-3.0504	-0.002182	715.3191824240574	70.701	0.22397	72.054	71.937	72.161	1.3536	0.0086239	-0.0034728	NaN	8.1555	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1239400	+		17019	10223	8052	8090							-0.06595991380368105
LDIYMEQRCCR	11	Unmodified	_LDIYMEQRCCR_					0	0	0			REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	REV__LEFTY1|p.A303Sfs*20|1|0.07|ENSG00000243709|chr1:225886921-225886922|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	715.322882	1428.63121	1.2761	0.00091286	-4.0066	-0.002866	-2.7304	-0.0019531	715.320075387273	70.298	0.25006	72.136	72.01	72.26	1.8378	0.090505	-0.001178	NaN	8.1555	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629140	+		17020	10223	8052	8090							-0.06595991380368105
LDKGISLDSYS	11	Unmodified	_LDKGISLDSYS_					0	0	0			REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	REV__tr|A0A7D6VMT7|A0A7D6VMT7_9CLOTCarbohydratebindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3041259646416	2	599.303518	1196.59248	2.3192	0.0013899	0.10501	6.2935E-05	2.4242	0.0014528	599.3040377122347	58.574	0.26071	58.574	58.428	58.689	0					11	7	2	0	0	0	0.87205	1	24440	24440		11.495	0.67078	1	595570	+		17021	15323	8053	8091	20039	20039					0.002050658527878113
LDKIMILFRF	10	Unmodified	_LDKIMILFRF_					0	0	0		nc|ENSG00000139842|Q13619-2|CUL4A;ENSG00000139842|ENST00000375440|CUL4A	nc|ENSG00000139842|Q13619-2|CUL4A	nc|ENSG00000139842|Q13619-2|CUL4A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	432.8849365115166	3	432.58966	1294.74715	0.32172	0.00013917	0.98489	0.00042605	1.3066	0.00056523	432.5901489726987	16.204	0.31455	17.243	17.091	17.405	1.0392					28	11	3	0	0	0	0.12556	1	6665	6665		1.9064	0	1	1856300			17022	2895	8054	8092	20040	20040					0.11156643524304855
LDKIMILFRF	10	Unmodified	_LDKIMILFRF_					0	0	0		nc|ENSG00000139842|Q13619-2|CUL4A;ENSG00000139842|ENST00000375440|CUL4A	nc|ENSG00000139842|Q13619-2|CUL4A	nc|ENSG00000139842|Q13619-2|CUL4A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	432.58966	1294.74715	0.82051	0.00035495	0.43538	0.00018834	1.2559	0.00054329	432.5898294863123	17.29	0.37708	17.441	17.248	17.625	0.15093	0.076942	-0.00039593	NaN	1.9064	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	624840			17023	2895	8054	8092							0.11156643524304855
LDKLHVGLIPF	11	Unmodified	_LDKLHVGLIPF_					0	0	0			REV__ENST00000494001.5_1_11:64503317-64504482:-|nuORF	REV__ENST00000494001.5_1_11:64503317-64504482:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9211608767509	3	417.920174	1250.73869	0.73514	0.00030723	1.4002	0.00058519	2.1354	0.00089241	417.92072332307174	28.679	0.72291	30.478	30.236	30.959	1.7987					68	23	4	0	0	0	1.0131	1	12160	12160		1.2148	0	1	5086900	+		17024	8705	8055	8093	20041	20041					0.12335412879338037
LDKMFHSNVSL	11	Unmodified	_LDKMFHSNVSL_					0	0	0			REV__ENSG00000004779|ENST00000007516|NDUFAB1	REV__ENSG00000004779|ENST00000007516|NDUFAB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8896057009697	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.831	1	57.831	57.331	58.331	0								0	0	0	0.63775	1	24131	24131		0.40827	0	1		+		17025	8488	8056	8094	20042	20042					0.010571113458354375
LDKPRATR	8	Unmodified	_LDKPRATR_					0	0	0			REV__ENSG00000111186|ENST00000397196|WNT5B	REV__ENSG00000111186|ENST00000397196|WNT5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7864562869072	2	478.785433	955.556313	3.4186	0.0016368	-0.83721	-0.00040084	2.5814	0.0012359	478.7848727867774	74.753	0.46461	75.078	74.802	75.267	0.32463					45	14	4	0	0	0	0.88587	1	31264	31264		5.2307	0	1	9049000	+		17026	9319	8057	8095	20043	20043					0.0767569825721921
LDLDGHVP	8	Unmodified	_LDLDGHVP_					0	0	0			REV__ENSG00000127603|ENST00000564288|MACF1	REV__ENSG00000127603|ENST00000564288|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2250854372978	2	433.224342	864.434132	0.10469	4.5355E-05	0.90039	0.00039007	1.0051	0.00043542	433.2247477106498	16.979	0.78	16.979	16.691	17.471	0					57	24	3	0	0	0	0.74212	1	7111	7111		26.341	0	1	4701800	+		17027	9720	8058	8096	20044	20044					-0.0035076354498642104
LDLDGHVP	8	Unmodified	_LDLDGHVP_					0	0	0			REV__ENSG00000127603|ENST00000564288|MACF1	REV__ENSG00000127603|ENST00000564288|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2235290408134	2	433.224342	864.434132	0.80626	0.00034929	-1.4021	-0.00060741	-0.5958	-0.00025812	433.2238121452451	16.86	0.52805	17.011	16.801	17.33	0.15093					29	17	2	0	0	0	0.59872	1	6990	6990		40.449	0	1	3182000	+		17028	9720	8058	8096	20045	20045					-0.0035076354498642104
LDLDSDCG	8	Unmodified	_LDLDSDCG_					0	0	0		ENST00000471276.5_2_12:56225132-56228769:+|nuORF;ENST00000482378.6_2_12:56226965-56228769:+|nuORF	ENST00000471276.5_2_12:56225132-56228769:+|nuORF	ENST00000471276.5_2_12:56225132-56228769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	837.3337890505791	1	837.329475	836.322198	2.77	0.0023194	-2.438	-0.0020414	0.33199	0.00027799	837.3272799846139	98.508	0.14585	98.588	98.504	98.65	0.080368					10	5	2	0	0	0	0.88587	1	41240	41240		5.2307	2.3415	1	14214000			17029	6739	8059	8097	20046	20046					-0.1025098568429712
LDLHHLEFL	9	Unmodified	_LDLHHLEFL_					0	0	0		ENST00000358220.5_1_10:1175700-1175889:+|nuORF	ENST00000358220.5_1_10:1175700-1175889:+|nuORF	ENST00000358220.5_1_10:1175700-1175889:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8131591677666	2	568.808574	1135.60259	1.8092	0.0010291	0.49594	0.00028209	2.3052	0.0013112	568.8083772213287	65.502	0.76579	67.41	66.969	67.735	1.9085					61	24	4	0	0	0	0.5697	1	27345	27345		12.532	0	1	18839000			17030	6009	8060	8098	20047	20047					0.04021718368676375
LDLLFHMVI	9	Unmodified	_LDLLFHMVI_					0	0	0			REV__ENST00000337859.10_1_2:187368819-187368876:+|nuORF	REV__ENST00000337859.10_1_2:187368819-187368876:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2190429568291	2	550.81227	1099.60999	1.6955	0.00093393	2.1901	0.0012064	3.8857	0.0021403	550.8142490945343	50.386	0.094246	50.715	50.667	50.761	0.32824					4	2	2	0	0	0	0.11898	1	21119	21119		0.6015	0	1	184440	+		17031	12477	8061	8099	20048	20048					0.06416734644722055
LDLLLLLQLLR	11	Unmodified	_LDLLLLLQLLR_					0	0	0			REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	REV__ENST00000426654.6_1_16:69660389-69681075:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9446288943291	2	661.942131	1321.86971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.096	1	16.096	15.596	16.596	0								0	0	0	0.63775	1	6684	6684		0.35063	0	1		+		17032	13001	8062	8100	20049	20049					0.22164803527380172
LDLLMEEIR	9	Unmodified	_LDLLMEEIR_					0	0	0		ZBTB40|p.Q1047Sfs*26|1|0.06|ENSG00000184677|chr1:22521585-22521585|C/-|frameshift_variant;ENSG00000184677|ENST00000375647|ZBTB40	ZBTB40|p.Q1047Sfs*26|1|0.06|ENSG00000184677|chr1:22521585-22521585|C/-|frameshift_variant	ZBTB40|p.Q1047Sfs*26|1|0.06|ENSG00000184677|chr1:22521585-22521585|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1131.610278308392	1	1131.60782	1130.60055	3.8846	0.0043958	-1.4109	-0.0015966	2.4737	0.0027992	1131.6060061676988	101.18	0.20543	101.25	101.12	101.33	0.067009					19	6	4	0	0	0	0.61249	1	42393	42393		10.824	0	1	79066000			17033	4703	8063	8101	20050	20050					0.04046921568533435
LDLMCYMV	8	Unmodified	_LDLMCYMV_					0	0	0		ENSG00000104613|ENST00000397977|INTS10;ENST00000519493.1_1_8:19690706-19694700:+|nuORF	ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2232543826103	2	494.221042	986.427532	2.1528	0.001064	1.8957	0.0009369	4.0485	0.0020009	494.2221520371725	68.186	0.49463	69.564	69.242	69.737	1.3778					78	15	9	0	0	0	0.88504	1	28589	28589		5.7604	0	1	31170000			17034	1466	8064	8102	20051	20051					-0.06622484083891322
LDLRRNQLLR	10	Unmodified	_LDLRRNQLLR_					0	0	0			REV__ENSG00000148341|ENST00000372564|SH3GLB2	REV__ENSG00000148341|ENST00000372564|SH3GLB2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	648.3965942263603	2	648.896577	1295.7786	3.2712	0.0021227	3.0084	0.0019522	6.2796	0.0040748	648.8984816056251	95.151	0.17523	95.553	95.506	95.681	0.40208					11	7	2	0	0	0	0.12556	1	40061	40061		1.4819	0.15237	1	954870	+		17035	10341	8065	8103	20052	20052					0.14254352602597464
LDLSSNLLKTI	11	Unmodified	_LDLSSNLLKTI_					0	0	0		ENSG00000101916|ENST00000218032|TLR8;nc|ENSG00000101916|Q9NR97-2|TLR8	ENSG00000101916|ENST00000218032|TLR8	ENSG00000101916|ENST00000218032|TLR8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2436706423759	3	406.243094	1215.70745	0.79679	0.00032369	-0.25471	-0.00010347	0.54208	0.00022022	406.2429863896212	37.987	0.30263	39.808	39.64	39.942	1.8202					24	9	3	0	0	0	0.77451	1	15902	15902		9.2438	1.7667	1	7759200			17036	1371	8066	8104	20053	20053					0.10822795054582457
LDLVRLAPL	9	Unmodified	_LDLVRLAPL_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3242370486259	2	505.32386	1008.63317	2.353	0.001189	-1.3427	-0.0006785	1.0103	0.00051052	505.32407176962755	69.378	2.2451	70.743	70.35	72.595	1.3657					189	72	6	0	0	0	0.30098	1	29531	29531		25.399	2.663	1	850920000	+		17037	9799	8067	8105	20054	20054					0.12919496753693238
LDLVRLAPL	9	Unmodified	_LDLVRLAPL_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3251830935478	2	505.32386	1008.63317	1.3884	0.0007016	-0.20979	-0.00010601	1.1786	0.00059558	505.3246927802658	68.807	2.3248	70.66	70.281	72.606	1.853					225	74	6	0	0	0	0.20671	1	29255	29255		32.305	3.2239	1	643420000	+		17038	9799	8067	8105	20055	20055					0.12919496753693238
LDLYEWEEPSF	11	Unmodified	_LDLYEWEEPSF_					0	0	0			REV__ENSG00000181007|ENST00000392161|ZFP82	REV__ENSG00000181007|ENST00000392161|ZFP82	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2231017947197	3	476.550364	1426.62926	1.8795	0.00089567	-2.7377	-0.0013047	-0.85823	-0.00040899	476.54902662955277	54.33	1.1807	56.299	55.719	56.9	1.9684					69	38	2	0	0	0	0.14606	1	22920	22920		1.1098	0.096179	1	3230100	+		17039	11310	8068	8106	20056	20056					-0.06698682321348315
LDNGMIYSIHK	11	Unmodified	_LDNGMIYSIHK_					0	0	0		tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.015	1	21.015	20.515	21.515	0								0	0	0	0.63775	1	8737	8737		1.3296	0.63198	1				17040	17017	8069	8107	20057	20057					0.010571113457899628
LDNIVFYLL	9	Unmodified	_LDNIVFYLL_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3226806521416	2	555.3157	1108.61685	3.0905	0.0017162	2.5641	0.0014239	5.6546	0.0031401	555.3168952371849	103.75	0.85164	103.91	103.4	104.25	0.16055					87	40	5	0	0	0	0.7849	1	43544	43544		3.9444	0.66309	1	96408000	+		17041	9194	8070	8108	20058	20058					0.06688370796950949
LDNNLKEV	8	Unmodified	_LDNNLKEV_					0	0	0		tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7565185427666	2	472.756007	943.497461	0.80022	0.00037831	1.0184	0.00048143	1.8186	0.00085974	472.7561267720245	22.139	0.28059	23.755	23.61	23.89	1.6158					17	8	3	0	0	0	0.87065	1	9267	9267		14.838	0	1	1362300			17042	16888	8071	8109	20059	20059					0.023451771722307058
LDPEVVEAL	9	Unmodified	_LDPEVVEAL_					0	0	0		ENSG00000184731|ENST00000327669|FAM110C	ENSG00000184731|ENST00000327669|FAM110C	ENSG00000184731|ENST00000327669|FAM110C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7684509158134	2	492.76604	983.517527	2.5706	0.0012667	0.23929	0.00011791	2.8099	0.0013846	492.7660148991316	63.493	0.68631	63.822	63.254	63.94	0.32899					29	21	2	0	0	0	0.61249	1	26533	26533		10.824	0	1	582450			17043	4706	8072	8110	20060	20060					0.02510928112201327
LDPGGYFII	9	Unmodified	_LDPGGYFII_					0	0	0		ENSG00000047315|ENST00000314595|POLR2B	ENSG00000047315|ENST00000314595|POLR2B	ENSG00000047315|ENST00000314595|POLR2B	MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7676574587822	2	497.765843	993.517133	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.405	1	82.405	81.905	82.905	0								0	0	0	0.40188	1	34330	34330		8.5933	0	1				17044	677	8073	8111	20061	20061					0.020115531830015243
LDQGHLGS	8	Unmodified	_LDQGHLGS_					0	0	0			REV__nc|ENSG00000014257|P15309-2|ACP3	REV__nc|ENSG00000014257|P15309-2|ACP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7052490115166	2	413.706317	825.398081	-0.11058	-4.5749E-05	-3.0561	-0.0012643	-3.1667	-0.0013101	413.7053347758918	24.618	0.36662	24.618	24.398	24.765	0					29	11	4	0	0	0	0.87431	1	10246	10246		12.532	1.7076	1	1318100	+		17045	14383	8074	8112	20062	20062					-0.021602207218393232
LDQLFAWMY	9	Unmodified	_LDQLFAWMY_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.1901733279228	3	396.191565	1185.55287	-1.0761	-0.00042635	-3.7597	-0.0014896	-4.8359	-0.0019159	396.1901659856423	14.302	0.2807	14.302	14.131	14.412	0					14	8	2	0	0	0	0.3154	1	5929	5929		17.113	2.1557	1	1664800	+		17046	9163	8075	8113	20063	20063					-0.032487326316640974
LDQLFAWMY	9	Unmodified	_LDQLFAWMY_					0	0	0			REV__ENSG00000105131|ENST00000221730|EPHX3	REV__ENSG00000105131|ENST00000221730|EPHX3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	396.191565	1185.55287	0.33279	0.00013185	-5.4384	-0.0021546	-5.1056	-0.0020228	396.1895944179881	14.314	0.18874	14.427	14.322	14.511	0.11295	0.06283	-0.0013947	NaN	17.113	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226300	+		17047	9163	8075	8113							-0.032487326316640974
LDQRPFLI	8	Unmodified	_LDQRPFLI_					0	0	0			REV__ADAMTS4|p.T317P|1|0.16|ENSG00000158859|chr1:161196565-161196565|T/G|missense_variant	REV__ADAMTS4|p.T317P|1|0.16|ENSG00000158859|chr1:161196565-161196565|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2929565310478	2	501.292559	1000.57057	2.3833	0.0011947	-2.7903	-0.0013987	-0.40696	-0.000204	501.29106682581175	65.826	0.72903	67.225	66.817	67.546	1.3989					47	23	3	0	0	0	0.88163	1	27604	27604		7.9102	2.6795	1	1323900	+		17048	8082	8076	8114	20064	20064					0.07030350685522535
LDRDLFLLV	9	Unmodified	_LDRDLFLLV_					0	0	0			REV__ENSG00000139549|ENST00000649637|DHH	REV__ENSG00000139549|ENST00000649637|DHH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3268920779228	2	552.326599	1102.63865	1.2722	0.0007027	-0.36036	-0.00019903	0.91189	0.00050366	552.3263237015566	83.974	0.32544	85.162	84.954	85.28	1.1879					18	10	2	0	0	0	0.35546	1	35237	35237		22.658	4.285	1	2972800	+		17049	10105	8077	8115	20065	20065					0.09143175545523263
LDRIWRLLV	9	Unmodified	_LDRIWRLLV_					0	0	0		tr|A0A553SJU3|A0A553SJU3_NIACILeucine--tRNAligaseOS=NialliacirculansOX=1397GN=leuSPE=3SV=1	tr|A0A553SJU3|A0A553SJU3_NIACILeucine--tRNAligaseOS=NialliacirculansOX=1397GN=leuSPE=3SV=1	tr|A0A553SJU3|A0A553SJU3_NIACILeucine--tRNAligaseOS=NialliacirculansOX=1397GN=leuSPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	593.1583129763603	2	592.369133	1182.72371	1.5006	0.00088893	-0.37962	-0.00022487	1.121	0.00066406	592.36886082301	68.145	0.28401	68.468	68.313	68.597	0.32269					17	8	3	0	0	0	0.11908	1	28475	28475		2.0598	0.21551	1	740230			17050	16263	8078	8116	20066	20066					0.13965965801980929
LDRRRLRVWR	10	Unmodified	_LDRRRLRVWR_					0	0	0			REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	713.4377929568291	2	713.436735	1424.85892	2.1241	0.0015154	-0.5785	-0.00041272	1.5456	0.0011027	713.4363280518709	53.212	1.1124	53.212	52.854	53.966	0					111	37	4	0	0	0	0.89803	1	22373	22373		0.45834	0.057624	1	39689000	+		17051	8465	8079	8117	20067	20067					0.16348258716311648
LDSEALLTL	9	Unmodified	_LDSEALLTL_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5442382693291	1	974.540454	973.533177	2.4231	0.0023614	-1.2073	-0.0011765	1.2158	0.0011849	974.5409620047501	73.764	0.35287	74.089	73.912	74.265	0.32494					21	10	3	0	0	0	0.059546	1	30856	30856		64.236	6.765	1	857070			17052	2993	8080	8118	20068	20068					0.04535214629231632
LDSEALLTL	9	Unmodified	_LDSEALLTL_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5433227419853	1	974.540454	973.533177	3.336	0.0032511	-2.1907	-0.0021349	1.1454	0.0011162	974.5400334302684	72.85	0.46837	74.179	73.913	74.381	1.3297					29	14	3	0	0	0	0.013238	2	30542	30542;30599		104.8	7.7245	1	5540600			17053	2993	8080	8118	20069;20070	20069					0.04535214629231632
LDSEALLTL	9	Unmodified	_LDSEALLTL_					0	0	0		ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	ENSG00000142449|ENST00000600128|FBN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5399658083916	1	974.540454	973.533177	2.5267	0.0024624	-0.80699	-0.00078644	1.7197	0.0016759	974.5409252075896	72.311	0.40121	74.121	73.952	74.353	1.8101					29	12	3	0	0	0	0.026628	2	30325	30325;30370		92.822	7.4654	1	6032500			17054	2993	8080	8118	20071;20072	20071					0.04535214629231632
LDSEGLLVK	9	Unmodified	_LDSEGLLVK_					0	0	0		tr|A0A7D6VMV7|A0A7D6VMV7_9CLOTValine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=valSPE=3SV=1	tr|A0A7D6VMV7|A0A7D6VMV7_9CLOTValine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=valSPE=3SV=1	tr|A0A7D6VMV7|A0A7D6VMV7_9CLOTValine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=valSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2810546755791	2	487.281857	972.549162	0.98674	0.00048082	0.99536	0.00048502	1.9821	0.00096584	487.28191597627256	38.2	0.375	40.02	39.818	40.193	1.8202					20	11	2	0	0	0	0.12174	1	15992	15992		42.095	0.25493	1	3039200			17055	16718	8081	8119	20073	20073					0.06178920866148019
LDSFLIFVTAP	11	Unmodified	_LDSFLIFVTAP_					0	0	0			REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	REV__nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8551513552666	2	611.839539	1221.66453	2.6402	0.0016154	0.16517	0.00010106	2.8054	0.0017164	611.8386905125108	85.437	1.1973	86.569	86.152	87.35	1.1326					120	47	3	0	0	0	0.1562	1	35762	35762		45.7	0	1	107710000	+		17056	9374	8082	8120	20074	20074					0.06256024997151144
LDSGDLSDFI	10	Unmodified	_LDSGDLSDFI_					0	0	0		ENSG00000174343|ENST00000310169|CHRNA9	ENSG00000174343|ENST00000310169|CHRNA9	ENSG00000174343|ENST00000310169|CHRNA9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.7977783083916	2	541.256037	1080.49752	2.7874	0.0015087	-0.83992	-0.00045461	1.9474	0.0010541	541.2551725264531	79.472	0.37378	80.723	80.551	80.925	1.2512					23	11	3	0	0	0	0.1245	1	33317	33317		15.847	1.0089	1	1233400			17057	4327	8083	8121	20075	20075					-0.03950867618414122
LDSGDLSDFI	10	Unmodified	_LDSGDLSDFI_					0	0	0		ENSG00000174343|ENST00000310169|CHRNA9	ENSG00000174343|ENST00000310169|CHRNA9	ENSG00000174343|ENST00000310169|CHRNA9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.256037	1080.49752	2.0887	0.0011305	-1.0853	-0.00058741	1.0034	0.00054309	541.2547756457817	79.034	0.27901	80.769	80.567	80.846	1.735	0.022675	-0.0001467	NaN	15.847	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1403200			17058	4327	8083	8121							-0.03950867618414122
LDSIMSNRF	9	Unmodified	_LDSIMSNRF_					0	0	0		nc|ENSG00000132003|Q9H7M6|ZSWIM4;ENSG00000132003|ENST00000590508|ZSWIM4	nc|ENSG00000132003|Q9H7M6|ZSWIM4	nc|ENSG00000132003|Q9H7M6|ZSWIM4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.3099853396416	2	541.768591	1081.52263	3.3789	0.0018306	1.1939	0.00064681	4.5728	0.0024774	541.7690605202203	81.33	0.30553	83.026	82.86	83.166	1.6959					24	9	4	0	0	0	0.10844	1	34101	34101		11.64	3.7301	1	1592300			17059	2511	8084	8122	20076	20076					-0.014870912968262928
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5442382693291	3	422.542047	1264.60431	0.59575	0.00025173	3.3703	0.0014241	3.9661	0.0016758	422.5436697382601	14.786	0.18692	14.899	14.789	14.976	0.11295					10	5	2	0	0	0	0.94603	1	6147	6147		7.0371	2.6309	1	682640	+		17060	10714	8085	8123	20077	20077					-0.017407767199074442
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5437499880791	3	422.542047	1264.60431	0.63455	0.00026812	4.2302	0.0017874	4.8647	0.0020556	422.54387285439645	15.504	0.28265	15.635	15.431	15.714	0.13022					14	8	2	0	0	0	0.84946	1	6433	6433		12.856	4.9105	1	570510	+		17061	10714	8085	8123	20078	20078					-0.017407767199074442
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5436889529228	3	422.542047	1264.60431	0.08388	3.5443E-05	3.1261	0.0013209	3.21	0.0013563	422.5436185754378	14.953	0.28288	15.722	15.519	15.802	0.76937					16	8	3	0	0	0	0.95289	1	6221	6221		6.6235	1.9075	1	672020	+		17062	10714	8085	8123	20079	20079					-0.017407767199074442
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	422.542047	1264.60431	0.63455	0.00026812	4.2302	0.0017874	4.8647	0.0020556	422.54387285439645	15.504	0.28265	15.635	15.431	15.714	0.13022	-0.060547	0.00037275	NaN	12.856	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570510	+		17063	10714	8085	8123							-0.017407767199074442
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	422.542047	1264.60431	0.08388	3.5443E-05	3.1261	0.0013209	3.21	0.0013563	422.5436185754378	14.953	0.28288	15.722	15.519	15.802	0.76937	0.02721	-0.0010268	NaN	12.856	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	672020	+		17064	10714	8085	8123							-0.017407767199074442
LDSLAMDLEMK	11	Unmodified	_LDSLAMDLEMK_					0	0	0			REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	REV__ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	422.542047	1264.60431	0.20348	8.5979E-05	3.0465	0.0012873	3.25	0.0013733	422.543297389614	14.86	0.15695	15.757	15.68	15.837	0.89664	0.061951	-0.0011277	NaN	12.856	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	755340	+		17065	10714	8085	8123							-0.017407767199074442
LDSLEQYIK	9	Unmodified	_LDSLEQYIK_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3036376833916	2	554.797872	1107.58119	1.6398	0.00090978	0.3041	0.00016872	1.9439	0.0010785	554.7981239186124	46.413	0.75054	47.788	47.493	48.243	1.3751					89	23	5	0	0	0	0.63129	1	19517	19517		10.074	0.6908	1	171060000			17066	1860	8086	8124	20080	20080					0.031702885492677524
LDSMVTISL	9	Unmodified	_LDSMVTISL_					0	0	0			REV__ENSG00000188817|ENST00000343837|SNTN	REV__ENSG00000188817|ENST00000343837|SNTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	978.5201904177666	1	978.51761	977.510333	1.8221	0.001783	0.15576	0.00015241	1.9779	0.0019354	978.5171511483196	75.739	0.28693	75.739	75.628	75.915	0					13	8	2	0	0	0	0.13873	1	31525	31525		39.957	3.9131	1	1185900	+		17067	11588	8087	8125	20081	20081					0.02067872240138513
LDSQDSSDEDH	11	Unmodified	_LDSQDSSDEDH_					0	0	0			REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF	REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	624.2364379763603	2	624.236561	1246.45857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.994	1	75.994	75.494	76.494	0								0	0	0	0.63775	1	31632	31632		1.3295	0.5359	1		+		17068	13861	8088	8126	20082	20082					-0.1548024471073859
LDSYIIKFV	9	Unmodified	_LDSYIIKFV_					0	0	0			REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	549.3184081912041	2	549.3157	1096.61685	2.554	0.0014029	1.8372	0.0010092	4.3912	0.0024121	549.3165204012508	86.013	0.45596	86.265	86.1	86.556	0.25227					34	14	3	0	0	0	0.70108	1	36025	36025		7.2892	0.56607	1	7406500	+		17069	15905	8089	8127	20083	20083					0.07240370796944262
LDSYIIKFV	9	Unmodified	_LDSYIIKFV_					0	0	0			REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	549.3157	1096.61685	2.554	0.0014029	1.8372	0.0010092	4.3912	0.0024121	549.3165204012508	86.013	0.45596	86.265	86.1	86.556	0.25227	-0.04456	-0.00046818	NaN	7.2892	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7406500	+		17070	15905	8089	8127							0.07240370796944262
LDSYIIKFV	9	Unmodified	_LDSYIIKFV_					0	0	0			REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	REV__tr|A0A7D7AD61|A0A7D7AD61_9CLOTPadRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21925PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	549.3157	1096.61685	2.257	0.0012398	2.8171	0.0015475	5.0741	0.0027873	549.3157936119686	85.298	0.2862	86.457	86.303	86.589	1.159	0.14777	0.00060838	NaN	7.2892	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3237600	+		17071	15905	8089	8127							0.07240370796944262
LDTLSLFTV	9	Unmodified	_LDTLSLFTV_					0	0	0			REV__nc|ENSG00000119402|Q9UKT8-2|FBXW2	REV__nc|ENSG00000119402|Q9UKT8-2|FBXW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7881652712822	2	504.784233	1007.55391	3.1753	0.0016028	1.4563	0.00073513	4.6316	0.002338	504.7853221591523	63.013	0.43726	64.427	64.254	64.691	1.4134					25	10	3	0	0	0	0.37357	1	26411	26411		21.747	1.293	1	3110900	+		17072	9538	8090	8128	20084	20084					0.05043805008904201
LDTLVQRPII	10	Unmodified	_LDTLVQRPII_					0	0	0		nc|ENSG00000130338|Q9NRJ4-2|TULP4;ENSG00000130338|ENST00000367097|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	nc|ENSG00000130338|Q9NRJ4-2|TULP4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	583.8094970583916	2	584.358431	1166.70231	2.581	0.0015082	-2.5182	-0.0014716	0.062768	3.6679E-05	584.3571473356998	75.356	0.70741	76.662	76.343	77.051	1.3063					33	22	2	0	0	0	0.125	1	31757	31757		10.074	0	1	2180500			17073	2427	8091	8129	20085	20085					0.1256253598260173
LDTRRPKKYI	10	Unmodified	_LDTRRPKKYI_					0	0	0			REV__nc|ENSG00000124721|Q96JB1-2|DNAH8	REV__nc|ENSG00000124721|Q96JB1-2|DNAH8	MSMS	GG20161007_CRH_Patient100_W632_02	4	645.3884765505791	2	645.388054	1288.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.243	1	92.609	92.109	93.109	1.366								0	0	0	0.65836	1	38420	38420		6.7232	3.1267	1		+		17074	9654	8092	8130	20086	20086					0.1287243199678869
LDVFEPTVI	9	Unmodified	_LDVFEPTVI_					0	0	0			REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1032.564746081829	1	1032.56119	1031.55391	1.8851	0.0019465	0.8585	0.00088645	2.7436	0.0028329	1032.5622867032905	69.017	0.30412	70.87	70.737	71.041	1.853					16	9	2	0	0	0	0.076627	1	28971	28971		57.471	0	1	2005700	+		17075	11468	8093	8131	20087	20087					0.039398050088948366
LDVFFQEEF	9	Unmodified	_LDVFFQEEF_					0	0	0		ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2761718630791	2	587.276772	1172.53899	2.1383	0.0012558	-2.7255	-0.0016006	-0.58728	-0.0003449	587.2741399388472	68.126	0.3717	69.504	69.303	69.675	1.3778					26	11	3	0	0	0	0.13873	1	28572	28572		39.957	14.558	1	2337400			17076	3377	8094	8132	20088	20088					-0.04037686859101086
LDVFFQEEF	9	Unmodified	_LDVFFQEEF_					0	0	0		ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	ENSG00000154143|ENST00000284288|PANX3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	587.276772	1172.53899	1.6849	0.00098953	-2.8785	-0.0016905	-1.1935	-0.00070093	587.2745868097746	67.609	0.37461	69.479	69.268	69.643	1.87	-0.012082	-9.5703E-05	NaN	39.957	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1944000			17077	3377	8094	8132							-0.04037686859101086
LDVNEIRKIIP	11	Unmodified	_LDVNEIRKIIP_					0	0	0		tr|A0A7D7A672|A0A7D7A672_9CLOT3-hydroxyacyl-[acyl-carrier-protein]dehydrataseFabZOS=ClostridiumintestinaleOX=36845GN=fabZPE=3SV=1	tr|A0A7D7A672|A0A7D7A672_9CLOT3-hydroxyacyl-[acyl-carrier-protein]dehydrataseFabZOS=ClostridiumintestinaleOX=36845GN=fabZPE=3SV=1	tr|A0A7D7A672|A0A7D7A672_9CLOT3-hydroxyacyl-[acyl-carrier-protein]dehydrataseFabZOS=ClostridiumintestinaleOX=36845GN=fabZPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2017394900322	4	328.20141	1308.77654	0.88873	0.00029168	1.9825	0.00065067	2.8713	0.00094235	328.20165622248624	37.018	0.62138	37.323	37.048	37.67	0.30497					89	31	4	0	0	0	1.0254	1	15667	15667		2.2527	0.79761	1	12820000			17078	17305	8095	8133	20089	20089					0.1344987907414179
LDVNFDDGLL	10	Unmodified	_LDVNFDDGLL_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7812377810478	2	560.779679	1119.5448	2.9352	0.001646	-3.1891	-0.0017884	-0.25394	-0.0001424	560.7778496211979	62.387	0.86498	63.804	63.365	64.23	1.4177					54	27	3	0	0	0	0.37288	3	26094	26094;26147;26206		34.932	4.2955	1	5709600			17079	17132	8096	8134	20090;20091;20092	20090					-0.010185883474150614
LDVNFDDGLL	10	Unmodified	_LDVNFDDGLL_					0	0	0		tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	tr|A0A7D6ZSE6|A0A7D6ZSE6_9CLOTMethioninesynthaseOS=ClostridiumintestinaleOX=36845GN=metHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7795898318291	2	560.779679	1119.5448	2.603	0.0014597	-3.3973	-0.0019051	-0.79424	-0.00044539	560.7778299470083	61.777	0.63045	63.735	63.368	63.999	1.9571					49	19	3	0	0	0	0.48044	2	25875	25875;25924		28.495	2.2264	1	5178000			17080	17132	8096	8134	20093;20094	20093					-0.010185883474150614
LDVVSDDVN	9	Unmodified	_LDVVSDDVN_					0	0	0			REV__nc|ENSG00000248905|Q68DA7-5|FMN1	REV__nc|ENSG00000248905|Q68DA7-5|FMN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2358276247978	2	488.235104	974.455655	0.91594	0.0004472	0.75054	0.00036644	1.6665	0.00081364	488.2356432929154	70.889	0.20999	72.727	72.591	72.801	1.8378					11	6	2	0	0	0	0.46905	1	29751	29751		16.942	1.1741	1	696270	+		17081	14550	8097	8135	20095	20095					-0.032594233069403344
LDWAIPKE	8	Unmodified	_LDWAIPKE_					0	0	0			REV__tr|A0A553SPQ5|A0A553SPQ5_NIACIasparaginaseOS=NialliacirculansOX=1397GN=CEQ21_26670PE=3SV=1	REV__tr|A0A553SPQ5|A0A553SPQ5_NIACIasparaginaseOS=NialliacirculansOX=1397GN=CEQ21_26670PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2648803591728	2	486.263468	970.512382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.39	1	30.673	30.173	31.173	1.2825								0	0	0	1.0178	1	12330	12330		2.3027	0.24298	1		+		17082	15099	8098	8136	20096	20096					0.025946690402406603
LDWDSRDD	8	Unmodified	_LDWDSRDD_					0	0	0		LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant;ENSG00000134569|ENST00000378623|LRP4	LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2168151736259	2	511.214703	1020.41485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.044	1	29.82	29.32	30.32	1.7754								0	0	0	1.0178	1	11739	11739		0.79363	0	1				17083	2623	8099	8137	20097	20097					-0.09453764626573502
LDWTIKLQI	9	Unmodified	_LDWTIKLQI_					0	0	0			REV__ENST00000358913.9_1_10:69869138-69869243:+|nuORF	REV__ENST00000358913.9_1_10:69869138-69869243:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	564.7144653201103	2	565.334424	1128.6543	1.9813	0.0011201	0.38442	0.00021733	2.3657	0.0013374	565.3351673024493	79.063	0.27942	80.798	80.66	80.94	1.735					14	8	2	0	0	0	0.11518	1	33128	33128		3.9444	0.3479	1	546020	+		17084	12583	8100	8138	20098	20098					0.09511462062573628
LDYILLIG	8	Unmodified	_LDYILLIG_					0	0	0			REV__SVA_D_dup912|chr11:73935626-73937666:-|1.861451030615439|0.3832838640500095|2.28|429.0|30|2|sense	REV__SVA_D_dup912|chr11:73935626-73937666:-|1.861451030615439|0.3832838640500095|2.28|429.0|30|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1899902224541	3	307.18815	918.54262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.19	1	103.37	102.87	103.87	0.18066								0	0	0	1.0178	1	43425	43425		0.40072	0	1		+		17085	14672	8101	8139	20099	20099					0.08009027705440985
LDYVFMIA	8	Unmodified	_LDYVFMIA_					0	0	0		ENST00000482503.5_1_2:160372909-160372984:-|nuORF	ENST00000482503.5_1_2:160372909-160372984:-|nuORF	ENST00000482503.5_1_2:160372909-160372984:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	325.1635619997978	3	324.50174	970.48339	-1.2611	-0.00040922	2.7222	0.00088336	1.4611	0.00047414	324.5024101057349	87.716	0.29585	87.716	87.551	87.847	0					13	9	2	0	0	0	2.3239	1	36645	36645		0	0	1	530400			17086	6836	8102	8140	20100	20100					-0.0030319158041720584
LEAAAALLLL	10	Unmodified	_LEAAAALLLL_					0	0	0			REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C	REV__nc|ENSG00000123612|Q8NER5-2|ACVR1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	997.6354247927666	1	997.629209	996.621933	2.8207	0.0028141	-0.070656	-7.0488E-05	2.7501	0.0027436	997.6298267224043	89.954	0.25729	90.163	89.985	90.242	0.20904					10	7	2	0	0	0	0.32206	1	37692	37692		37.974	1.847	1	586540	+		17087	9624	8103	8141	20101	20101					0.12348674659574499
LEADAEEWV	9	Unmodified	_LEADAEEWV_					0	0	0			REV__SLC22A11|p.G161Rfs*126|1|0.05|ENSG00000168065|chr11:64559221-64559222|-/C|frameshift_variant	REV__SLC22A11|p.G161Rfs*126|1|0.05|ENSG00000168065|chr11:64559221-64559222|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.7974120974541	2	531.242929	1060.47131	4.1621	0.0022111	-1.7693	-0.00093993	2.3927	0.0012711	531.242368489166	90.396	0.22587	91.762	91.638	91.864	1.366					10	6	2	0	0	0	0.11645	1	38079	38079		4.756	1.8668	1	327500	+		17088	14624	8104	8142	20102	20102					-0.05651136789924749
LEAKVWYR	8	Unmodified	_LEAKVWYR_					0	0	0			REV__ENSG00000113369|ENST00000265138|ARRDC3	REV__ENSG00000113369|ENST00000265138|ARRDC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1919433474541	2	532.798009	1063.58147	2.1619	0.0011518	-1.7787	-0.00094768	0.38317	0.00020415	532.7969789339328	82.57	0.43051	82.57	82.4	82.83	0					31	13	3	0	0	0	2.3239	1	34469	34469		0.6015	0	1	6289400	+		17089	9382	8105	8143	20103	20103					0.052217530597772566
LEARCGGIK	9	Unmodified	_LEARCGGIK_					0	0	0			REV__ENSG00000198129|ENST00000355602|DEFB107B	REV__ENSG00000198129|ENST00000355602|DEFB107B	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.1768066287041	3	316.176138	945.506586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.141	1	99.221	98.721	99.721	0.080376								0	0	0	0.42693	1	41506	41506		1.1933	0	1		+		17090	11505	8106	8144	20104	20104					0.03165247256924886
LEATLELLL	9	Unmodified	_LEATLELLL_					0	0	0		sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1;sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8086425662041	2	507.807708	1013.60086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.727	1	84.397	83.897	84.897	1.67								0	0	0	0.3709	1	34706	34706		11.64	3.7301	1				17091	15997	8107	8145	20105	20105					0.0946066456006065
LECFFPKAALQ	11	Unmodified	_LECFFPKAALQ_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.8330566287041	2	633.831191	1265.64783	2.3103	0.0014643	2.1631	0.001371	4.4734	0.0028354	633.8324533341483	50.294	0.3864	50.294	50.146	50.532	0					19	12	2	0	0	0	0.9945	1	20988	20988		4.897	0.95262	1	739210	+		17092	9489	8108	8146	20106	20106					0.025632008395405137
LECFFPKAALQ	11	Unmodified	_LECFFPKAALQ_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	633.831191	1265.64783	2.3103	0.0014643	2.1631	0.001371	4.4734	0.0028354	633.8324533341483	50.294	0.3864	50.294	50.146	50.532	0	0.11294	-1.8577E-05	NaN	4.897	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	739210	+		17093	9489	8108	8146							0.025632008395405137
LECFFPKAALQ	11	Unmodified	_LECFFPKAALQ_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	633.831191	1265.64783	1.826	0.0011574	2.286	0.0014489	4.1121	0.0026064	633.8323629098884	48.091	0.09341	50.068	49.99	50.084	1.9772	-0.11294	0.00013724	NaN	4.897	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	353040	+		17094	9489	8108	8146							0.025632008395405137
LECHANENIE	10	Unmodified	_LECHANENIE_					0	0	0			REV__tr|A0A553SQ05|A0A553SQ05_NIACIPhotosystemIassemblyproteinYcf4OS=NialliacirculansOX=1397GN=CEQ21_16095PE=4SV=1	REV__tr|A0A553SQ05|A0A553SQ05_NIACIPhotosystemIassemblyproteinYcf4OS=NialliacirculansOX=1397GN=CEQ21_16095PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2838012576103	3	391.173122	1170.49754	-1.0565	-0.00041326	-2.4218	-0.00094736	-3.4783	-0.0013606	391.17313612948465	17.876	0.61711	17.876	17.593	18.21	0					27	20	2	0	0	0	0.12518	1	7529	7529		8.9762	0.82072	1	931700	+		17095	15115	8109	8147	20107	20107					-0.08089190890086684
LEDCTLADGF	10	Unmodified	_LEDCTLADGF_					0	0	0		tr|A0A553SFH8|A0A553SFH8_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_08910PE=3SV=1	tr|A0A553SFH8|A0A553SFH8_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_08910PE=3SV=1	tr|A0A553SFH8|A0A553SFH8_NIACIDNA3'-5'helicaseOS=NialliacirculansOX=1397GN=CEQ21_08910PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2357055544853	2	542.23679	1082.45903	1.5352	0.00083245	1.0009	0.0005427	2.5361	0.0013752	542.2369090509309	66.64	0.48804	68.529	68.309	68.797	1.8889					22	15	2	0	0	0	0.81324	1	27971	27971		10.824	0.64053	1	1300500			17096	16058	8110	8148	20108	20108					-0.07890496524601076
LEDDWTMY	8	Unmodified	_LEDDWTMY_					0	0	0			REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.1476013064384	3	358.147914	1071.42191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.557	1	62.557	62.057	63.057	0								0	0	0	1.0178	1	26081	26081		0.45834	0	1		+		17097	9098	8111	8149	20109	20109					-0.1109416807037178
LEDDWTMY	8	Unmodified	_LEDDWTMY_					0	0	0			REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.1470214724541	3	358.147914	1071.42191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.701	1	62.701	62.201	63.201	0								0	0	0	1.0178	1	26142	26142		0.45834	0	1		+		17098	9098	8111	8149	20110	20110					-0.1109416807037178
LEDDWTMY	8	Unmodified	_LEDDWTMY_					0	0	0			REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	REV__nc|ENSG00000103196|Q9H0B8-5|CRISPLD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.1479980349541	3	358.147914	1071.42191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.077	1	64.077	63.577	64.577	0								0	0	0	1.0178	1	26716	26716		0.45834	0	1		+		17099	9098	8111	8149	20111	20111					-0.1109416807037178
LEDEMEEI	8	Unmodified	_LEDEMEEI_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2172424197197	2	504.215523	1006.41649	2.6597	0.0013411	1.7406	0.00087763	4.4003	0.0022187	504.216077910446	87.633	0.67956	87.633	87.378	88.058	0					61	22	5	0	0	0	0.88504	1	36683	36683		5.7604	0	1	1700300	+		17100	10472	8112	8150	20112	20112					-0.08645891652815862
LEDFPLPTVQ	10	Unmodified	_LEDFPLPTVQ_					0	0	0		ENST00000526909.5_1_11:710402-726978:+|nuORF;ENSG00000177106|ENST00000318562|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	ENST00000526909.5_1_11:710402-726978:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8071777224541	2	579.805697	1157.59684	1.7756	0.0010295	0.55726	0.0003231	2.3329	0.0013526	579.805732324251	77.172	0.40582	77.172	76.94	77.346	0					36	12	4	0	0	0	0.57775	1	32132	32132		24.021	0	1	4786700			17101	4435	8113	8151	20113	20113					0.02434575066308753
LEDFPLPTVQ	10	Unmodified	_LEDFPLPTVQ_					0	0	0		ENST00000526909.5_1_11:710402-726978:+|nuORF;ENSG00000177106|ENST00000318562|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	ENST00000526909.5_1_11:710402-726978:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8068725466728	2	579.805697	1157.59684	2.0242	0.0011736	0.70511	0.00040883	2.7293	0.0015825	579.8057802518548	76.801	0.37894	77.117	76.913	77.292	0.31654					35	11	4	0	0	0	0.44465	1	32124	32124		30.637	0	1	5112600			17102	4435	8113	8151	20114	20114					0.02434575066308753
LEDFPLPTVQ	10	Unmodified	_LEDFPLPTVQ_					0	0	0		ENST00000526909.5_1_11:710402-726978:+|nuORF;ENSG00000177106|ENST00000318562|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2	ENST00000526909.5_1_11:710402-726978:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8071777224541	2	579.805697	1157.59684	2.6897	0.0015595	0.59165	0.00034304	3.2814	0.0019026	579.8055454091048	75.369	0.48906	77.151	76.945	77.434	1.7817					41	15	4	0	0	0	0.79268	1	31672	31672		13.042	0	1	11882000			17103	4435	8113	8151	20115	20115					0.02434575066308753
LEDITLAVV	9	Unmodified	_LEDITLAVV_					0	0	0		tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7844421267509	2	486.784233	971.553913	3.4016	0.0016558	-1.9482	-0.00094834	1.4534	0.00070748	486.78332110089957	92.497	1.2018	92.665	92.281	93.483	0.16835					111	37	5	0	0	0	0.069258	1	38627	38627		60.39	0	1	76712000			17104	16813	8114	8152	20116	20116					0.06699805008906878
LEDITLAVV	9	Unmodified	_LEDITLAVV_					0	0	0		tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	tr|A0A7D6VQZ0|A0A7D6VQZ0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7858764529228	2	486.784233	971.553913	4.2267	0.0020575	-1.738	-0.00084602	2.4887	0.0012115	486.7834953836597	91.755	1.6235	92.691	92.275	93.899	0.93623					140	50	5	0	0	0	0.069258	2	38824	38824;39019		60.39	3.8776	1	189110000			17105	16813	8114	8152	20117;20118	20117					0.06699805008906878
LEDSENYFI	9	Unmodified	_LEDSENYFI_					0	0	0			REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	565.2573119997978	2	565.256037	1128.49752	2.4787	0.0014011	4.2313	0.0023918	6.7099	0.0037928	565.2579526415182	86.319	0.24349	86.563	86.394	86.638	0.24387					12	7	2	0	0	0	0.77526	1	36065	36065		4.3292	0	1	776460	+		17106	15036	8115	8153	20119	20119					-0.06158867618410113
LEDSENYFI	9	Unmodified	_LEDSENYFI_					0	0	0			REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	565.256037	1128.49752	2.4787	0.0014011	4.2313	0.0023918	6.7099	0.0037928	565.2579526415182	86.319	0.24349	86.563	86.394	86.638	0.24387	0.075703	0.00084567	NaN	4.3292	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776460	+		17107	15036	8115	8153							-0.06158867618410113
LEDSENYFI	9	Unmodified	_LEDSENYFI_					0	0	0			REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	REV__tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	565.256037	1128.49752	2.7509	0.001555	1.5487	0.00087542	4.2996	0.0024304	565.2564629402833	84.816	0.11872	86.412	86.341	86.46	1.5962	-0.075703	-0.002187	NaN	4.3292	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400850	+		17108	15036	8115	8153							-0.06158867618410113
LEEERREEEEK	11	Unmodified	_LEEERREEEEK_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2;nc|ENSG00000203880|Q9NV79-3|PCMTD2;ENST00000266078.7_1_20:62903543-62904950:+|nuORF	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.5697509646416	3	492.570598	1474.68997	0.82276	0.00040527	0.55497	0.00027336	1.3777	0.00067863	492.57076180535546	19.865	0.28512	20.924	20.762	21.047	1.0585					29	8	5	0	0	0	0.98455	1	8246	8246		4.7159	0	1	2545500			17109	5119	8116	8154	20120	20120					-0.02839197009052441
LEEERREEEEK	11	Unmodified	_LEEERREEEEK_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2;nc|ENSG00000203880|Q9NV79-3|PCMTD2;ENST00000266078.7_1_20:62903543-62904950:+|nuORF	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.5707580447197	3	492.570598	1474.68997	0.50355	0.00024803	0.1999	9.8464E-05	0.70345	0.0003465	492.57079233059716	19.268	0.25745	20.792	20.659	20.917	1.5237					36	8	5	0	0	0	0.95289	1	7999	7999		6.6235	0	1	2896400			17110	5119	8116	8154	20121	20121					-0.02839197009052441
LEEERREEEEK	11	Unmodified	_LEEERREEEEK_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2;nc|ENSG00000203880|Q9NV79-3|PCMTD2;ENST00000266078.7_1_20:62903543-62904950:+|nuORF	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	492.570598	1474.68997	0.82276	0.00040527	0.55497	0.00027336	1.3777	0.00067863	492.57076180535546	19.865	0.28512	20.924	20.762	21.047	1.0585	0.065824	0.0002712	NaN	6.6235	29	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2545500			17111	5119	8116	8154							-0.02839197009052441
LEEETFIVAVD	11	Unmodified	_LEEETFIVAVD_					0	0	0			REV__nc|ENSG00000159885|Q9UK12|ZNF222	REV__nc|ENSG00000159885|Q9UK12|ZNF222	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.8171874880791	2	632.819001	1263.62345	-0.28026	-0.00017735	-1.6617	-0.0010515	-1.942	-0.0012289	632.817835892503	14.039	0.14225	14.809	14.732	14.874	0.76937					9	4	3	0	0	0	0.58697	1	5843	5843		21.537	1.1224	1	1113600	+		17112	10583	8117	8155	20122	20122					0.002182191669817257
LEEETFIVAVD	11	Unmodified	_LEEETFIVAVD_					0	0	0			REV__nc|ENSG00000159885|Q9UK12|ZNF222	REV__nc|ENSG00000159885|Q9UK12|ZNF222	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	632.819001	1263.62345	0.8788	0.00055612	-6.1763	-0.0039085	-5.2975	-0.0033524	632.8163490465934	14.54	0.30928	14.54	14.286	14.596	0	-0.15278	-0.0038521	NaN	21.537	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785660	+		17113	10583	8117	8155							0.002182191669817257
LEEETFIVAVD	11	Unmodified	_LEEETFIVAVD_					0	0	0			REV__nc|ENSG00000159885|Q9UK12|ZNF222	REV__nc|ENSG00000159885|Q9UK12|ZNF222	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	632.819001	1263.62345	-0.28026	-0.00017735	-1.6617	-0.0010515	-1.942	-0.0012289	632.817835892503	14.039	0.14225	14.809	14.732	14.874	0.76937	0.11591	0.0018618	NaN	21.537	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1113600	+		17114	10583	8117	8155							0.002182191669817257
LEEETFIVAVD	11	Unmodified	_LEEETFIVAVD_					0	0	0			REV__nc|ENSG00000159885|Q9UK12|ZNF222	REV__nc|ENSG00000159885|Q9UK12|ZNF222	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	632.819001	1263.62345	-0.2987	-0.00018903	-3.8692	-0.0024485	-4.1679	-0.0026376	632.8169208097919	13.956	0.15068	14.784	14.704	14.855	0.82789	0.091616	-0.00093214	NaN	21.537	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	685150	+		17115	10583	8117	8155							0.002182191669817257
LEEETNKHD	9	Unmodified	_LEEETNKHD_					0	0	0		nc|ENSG00000082512|O00463-3|TRAF5;ENSG00000082512|ENST00000261464|TRAF5;nc|ENSG00000082512|O00463-2|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.3032104372978	2	557.754192	1113.49383	5.6704	0.0031627	0.37114	0.000207	6.0415	0.0033697	557.7537706456942	89.017	0.38564	90.073	89.886	90.271	1.0562					23	11	3	0	0	0	0.095205	1	37518	37518		25.399	12.868	1	1118200			17116	1032	8118	8156	20123	20123					-0.0583753739228996
LEEETNKHD	9	Unmodified	_LEEETNKHD_					0	0	0		nc|ENSG00000082512|O00463-3|TRAF5;ENSG00000082512|ENST00000261464|TRAF5;nc|ENSG00000082512|O00463-2|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	nc|ENSG00000082512|O00463-3|TRAF5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	557.754192	1113.49383	1.7547	0.00097871	0.012865	7.1757E-06	1.7676	0.00098588	557.7544524508818	90.194	0.224	90.194	90.095	90.319	0	0.10581	-0.00023063	NaN	25.399	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443190			17117	1032	8118	8156							-0.0583753739228996
LEEFRRYI	8	Unmodified	_LEEFRRYI_					0	0	0			REV__tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	REV__tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3083984255791	2	563.306198	1124.59784	2.2007	0.0012397	0.38689	0.00021794	2.5876	0.0014576	563.3067345513633	44.343	0.35075	46.303	46.162	46.513	1.9596					19	10	2	0	0	0	0.72752	1	18620	18620		26.884	5.137	1	2121800	+		17118	15461	8119	8157	20124	20124					0.0405283422589946
LEEFYTREYEK	11	Unmodified	_LEEFYTREYEK_					0	0	0		MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	502.0818664431572	3	502.908551	1505.70382	1.0651	0.00053567	-0.4633	-0.000233	0.60183	0.00030267	502.9079963592582	25.178	0.15293	25.178	25.102	25.255	0					6	4	2	0	0	0	0.14606	1	10479	10479		0.45452	0	1	263530			17119	7802	8120	8158	20125	20125					-0.028799195099509234
LEEFYTREYEK	11	Unmodified	_LEEFYTREYEK_					0	0	0		MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	502.908551	1505.70382	1.3386	0.0006732	-0.44485	-0.00022372	0.89377	0.00044948	503.24250642200707	24.976	0.15459	25.228	25.151	25.305	0.25197	0.046327	8.8565E-05	NaN	0.45452	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	373170			17120	7802	8120	8158							-0.028799195099509234
LEEFYTREYEK	11	Unmodified	_LEEFYTREYEK_					0	0	0		MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MTUS1|p.K1008E|1|0.05|ENSG00000129422|chr8:17655949-17655949|T/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	502.908551	1505.70382	1.4833	0.00074598	-0.72269	-0.00036345	0.76064	0.00038253	503.24286815503586	23.898	0.15416	25.139	25.052	25.206	1.241	-0.043064	-0.00033061	NaN	0.45452	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	289460			17121	7802	8120	8158							-0.028799195099509234
LEEIFQLL	8	Unmodified	_LEEIFQLL_					0	0	0		tr|A0A7D6VV78|A0A7D6VV78_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04265PE=4SV=1	tr|A0A7D6VV78|A0A7D6VV78_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04265PE=4SV=1	tr|A0A7D6VV78|A0A7D6VV78_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2859069705009	2	502.786776	1003.559	2.4857	0.0012498	-4.0589	-0.0020408	-1.5733	-0.00079102	503.2852845698689	72.34	0.46344	74.15	73.921	74.385	1.8101					48	14	4	0	0	0	0.72134	1	30299	30299		28.173	0	1	3030200			17122	16963	8121	8159	20126	20126					0.057361088715197184
LEELQKLVK	9	Unmodified	_LEELQKLVK_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2183715701103	2	550.339707	1098.66486	0.98623	0.00054276	1.5371	0.00084593	2.5233	0.0013887	550.3402657813215	31.754	0.25786	31.754	31.596	31.854	0					12	7	2	0	0	0	0.11611	1	13284	13284		6.2058	1.8765	1	403360	+		17123	9333	8122	8160	20127	20127					0.1194744471699778
LEELQKLVK	9	Unmodified	_LEELQKLVK_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2188598513603	2	550.339707	1098.66486	1.1683	0.00064298	-2.6288	-0.0014467	-1.4604	-0.00080374	550.337777995645	31.253	0.21242	31.544	31.479	31.691	0.29086					11	6	2	0	0	0	0.11568	1	13133	13133		1.4819	1.0812	1	642160	+		17124	9333	8122	8160	20128	20128					0.1194744471699778
LEELQKLVK	9	Unmodified	_LEELQKLVK_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.339707	1098.66486	0.62362	0.0003432	0.56221	0.0003094	1.1858	0.00065261	550.3399900366772	29.97	0.24595	31.252	31.164	31.409	1.2825	-0.21478	0.0006129	NaN	1.4819	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2026300	+		17125	9333	8122	8160							0.1194744471699778
LEELQKLVK	9	Unmodified	_LEELQKLVK_					0	0	0			REV__ENSG00000111642|ENST00000544040|CHD4	REV__ENSG00000111642|ENST00000544040|CHD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	550.339707	1098.66486	0.7348	0.00040439	-1.9905	-0.0010954	-1.2557	-0.00069104	550.3380825173045	29.519	0.30279	31.317	31.143	31.446	1.7987	-0.1496	-0.0021968	NaN	1.4819	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1384200	+		17126	9333	8122	8160							0.1194744471699778
LEELRELCL	9	Unmodified	_LEELRELCL_					0	0	0		nc|ENSG00000222009|C9JJ37-2|BTBD19;ENST00000482715.5_1_1:45274492-45278998:+|nuORF;ENSG00000222009|ENST00000450269|BTBD19	nc|ENSG00000222009|C9JJ37-2|BTBD19	nc|ENSG00000222009|C9JJ37-2|BTBD19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3041869997978	2	559.299724	1116.5849	2.94	0.0016443	3.781	0.0021147	6.721	0.0037591	559.3010943523387	70.287	0.34373	71.64	71.336	71.679	1.3536					27	10	4	0	0	0	0.076627	1	29500	29500		57.471	5.8415	1	6126500			17127	5279	8123	8161	20129	20129					0.03126635051489757
LEELSMHL	8	Unmodified	_LEELSMHL_					0	0	0			REV__ENST00000539508.5_1_9:13136054-13190160:-|nuORF	REV__ENST00000539508.5_1_9:13136054-13190160:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.4998351931572	3	324.500399	970.479368	-3.0017	-0.00097405	2.1497	0.00069759	-0.85195	-0.00027646	324.5010235520677	20.057	0.93388	20.057	19.634	20.568	0					49	29	2	0	0	0	0.68174	1	8340	8340		25.399	4.9457	1	3649000	+		17128	9225	8124	8162	20130	20130					-0.007052810741242865
LEERHRHRFEV	11	Unmodified	_LEERHRHRFEV_					0	0	0		nc|ENSG00000171793|P17812-2|CTPS1;ENSG00000171793|ENST00000650070|CTPS1	nc|ENSG00000171793|P17812-2|CTPS1	nc|ENSG00000171793|P17812-2|CTPS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4071533083916	2	754.397473	1506.78039	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.94	1	102.11	101.61	102.61	0.17032								0	0	0	0.63775	1	42893	42893		2.7352	0	1				17129	4207	8125	8163	20131	20131					0.047273616205529834
LEERLQIIFL	10	Unmodified	_LEERLQIIFL_					0	0	0		ENST00000338435.8_2_2:191765387-191766742:+|nuORF	ENST00000338435.8_2_2:191765387-191766742:+|nuORF	ENST00000338435.8_2_2:191765387-191766742:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	637.3859741091728	2	637.379363	1272.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.163	1	97.469	96.969	97.969	0.3062								0	0	0	0.65894	1	40871	40871		6.2058	0	1				17130	5923	8126	8164	20132	20132					0.1187109167115068
LEESGTLLKV	10	Unmodified	_LEESGTLLKV_					0	0	0		ENST00000503952.5_1_4:128606686-128637588:+|nuORF;nc|ENSG00000164066|Q9ULD6-4|INTU;ENSG00000164066|ENST00000335251|INTU	ENST00000503952.5_1_4:128606686-128637588:+|nuORF	ENST00000503952.5_1_4:128606686-128637588:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8130981326103	2	544.813522	1087.61249	1.5912	0.00086693	-0.04346	-2.3677E-05	1.5478	0.00084325	544.8133600846656	38.626	0.17283	38.935	38.827	39	0.30857					9	5	2	0	0	0	0.82019	1	16243	16243		10.074	0.6908	1	925850			17131	3744	8127	8165	20133	20133					0.07218861583396574
LEESRRLWRFL	11	Unmodified	_LEESRRLWRFL_					0	0	0		SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2;SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant;SPTBN2|p.R1805Qfs*108|1|0.25|ENSG00000173898|chr11:66691414-66691435|TGGCGTGCCCCGTGCAGGAAGC/-|frameshift_variant;SPTBN2|p.A1813Pfs*107|1|0.29|ENSG00000173898|chr11:66691412-66691412|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2861205935478	3	502.284287	1503.83103	1.9972	0.0010032	2.5329	0.0012722	4.5301	0.0022754	502.2852727104111	44.155	0.31437	46.099	45.893	46.208	1.9438					27	9	4	0	0	0	1.0357	1	18470	18470		1.4551	0.94916	1	1990700			17132	4305	8128	8166	20134	20134					0.09926890945530431
LEETQHDKD	9	Unmodified	_LEETQHDKD_					0	0	0		nc|ENSG00000131626|Q13136-2|PPFIA1;PPFIA1|p.L1093Tfs*23|1|0.06|ENSG00000131626|chr11:70375053-70375054|-/T|frameshift_variant;ENSG00000131626|ENST00000253925|PPFIA1	nc|ENSG00000131626|Q13136-2|PPFIA1	nc|ENSG00000131626|Q13136-2|PPFIA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	557.3011352419853	2	557.754192	1113.49383	2.5635	0.0014298	0.92553	0.00051622	3.489	0.001946	557.7544949567916	89.774	0.25789	89.998	89.903	90.161	0.2236					12	7	2	0	0	0	0.11568	1	37638	37638		10.824	0	1	358950			17133	2498	8129	8167	20135	20135					-0.0583753739228996
LEFDRDFRIRH	11	Unmodified	_LEFDRDFRIRH_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;ENST00000583611.5_1_17:31061878-31076003:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	752.1142455935478	2	752.394399	1502.77424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.7	1	115.85	115.35	116.35	0.15228								0	0	0	0.63775	1	50019	50019		1.3295	0	1				17134	4414	8130	8168	20136	20136					0.04296843389033711
LEFETAHRR	9	Unmodified	_LEFETAHRR_					0	0	0		ENST00000610159.1_1_4:140374466-140374664:-|nuORF	ENST00000610159.1_1_4:140374466-140374664:-|nuORF	ENST00000610159.1_1_4:140374466-140374664:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8072387576103	2	579.804354	1157.59415	2.3439	0.001359	3.42	0.0019829	5.7639	0.0033419	579.8059184249332	75.848	0.49014	77.142	76.881	77.371	1.2938					47	15	4	0	0	0	0.37357	1	31778	31778		21.747	2.4897	1	13859000			17135	7576	8131	8169	20137	20137					0.021661644520236223
LEFRTNTFL	9	Unmodified	_LEFRTNTFL_					0	0	0		ENST00000529402.1_1_11:89955703-89955811:-|nuORF	ENST00000529402.1_1_11:89955703-89955811:-|nuORF	ENST00000529402.1_1_11:89955703-89955811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8054687380791	2	570.806031	1139.59751	0.54343	0.00031019	-0.73463	-0.00041933	-0.1912	-0.00010914	570.8056082720823	57.313	0.2799	59.281	59.166	59.446	1.9684					27	18	2	0	0	0	0.12174	1	24028	24028		42.095	0	1	7504800			17136	7153	8132	8170	20138	20138					0.0332941450603812
LEGGVSVR	8	Unmodified	_LEGGVSVR_					0	0	0			REV__ENST00000537363.5_1_19:10670171-10670590:-|nuORF	REV__ENST00000537363.5_1_19:10670171-10670590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.7322875857353	2	408.732335	815.450116	-0.49942	-0.00020413	1.2473	0.00050979	0.74783	0.00030566	408.7327519756319	12.396	0.31025	13.089	12.917	13.227	0.69396					25	9	4	0	0	0	0.62161	1	5177	5177		38.151	0	1	8517400	+		17137	13758	8133	8171	20139	20139					0.03500942691914588
LEGPETPILI	10	Unmodified	_LEGPETPILI_					0	0	0		tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	tr|A0A553SHW0|A0A553SHW0_NIACIDUF4179domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.3130981326103	2	541.310615	1080.60668	2.0923	0.0011326	1.9509	0.001056	4.0432	0.0021886	541.3117620302062	80.653	0.36694	82.349	82.18	82.547	1.6959					20	11	3	0	0	0	0.81324	1	33821	33821		10.824	0	1	4244800			17138	16172	8134	8172	20140	20140					0.06959763071722591
LEGRRRKRLEE	11	Unmodified	_LEGRRRKRLEE_					0	0	0			REV__ENST00000367806.7_1_1:169396552-169396627:-|nuORF	REV__ENST00000367806.7_1_1:169396552-169396627:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.6174804568291	3	481.283057	1440.82734	2.5358	0.0012204	0.96535	0.0004646	3.5011	0.001685	481.2834259724061	89.603	0.82357	89.603	89.464	90.288	0					44	25	2	0	0	0	1.0388	1	37449	37449		0.50596	0	1	1334500	+		17139	12631	8135	8173	20141	20141					0.1245622117169205
LEGRRRKRLEE	11	Unmodified	_LEGRRRKRLEE_					0	0	0			REV__ENST00000367806.7_1_1:169396552-169396627:-|nuORF	REV__ENST00000367806.7_1_1:169396552-169396627:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	481.6174804568291	3	481.283057	1440.82734	2.5358	0.0012204	0.96535	0.0004646	3.5011	0.001685	481.2834259724061	89.603	0.82357	89.603	89.464	90.288	0					44	25	2	0	0	0	0.14606	1	37449	37449		0.50596	0	1	1334500	+		17140	12631	8135	8173	20142	20142					0.1245622117169205
LEGSRSYCL	9	Unmodified	_LEGSRSYCL_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2506591677666	2	514.247492	1026.48043	3.292	0.0016929	1.7028	0.00087564	4.9948	0.0025685	514.2478359751061	65.184	0.40773	66.583	66.38	66.788	1.3989					25	12	3	0	0	0	0.46905	1	27348	27348		16.942	0	1	1801600			17141	4158	8136	8174	20143	20143					-0.03175066705216523
LEGSRSYCL	9	Unmodified	_LEGSRSYCL_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	514.247492	1026.48043	2.0828	0.0010711	1.5999	0.00082275	3.6827	0.0018938	514.2481470530544	66.413	0.34792	66.738	66.591	66.939	0.32449	0.053956	0.00026371	NaN	16.942	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	820970			17142	4158	8136	8174							-0.03175066705216523
LEGSRSYCL	9	Unmodified	_LEGSRSYCL_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.247492	1026.48043	2.2221	0.0011427	0.42976	0.000221	2.6519	0.0013637	514.2476473577091	64.704	0.38066	66.632	66.422	66.803	1.928	-0.052106	-0.00093978	NaN	16.942	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1332100			17143	4158	8136	8174							-0.03175066705216523
LEGTALLSL	9	Unmodified	_LEGTALLSL_					0	0	0		ENST00000430145.3_1_19:49166463-49183997:+|nuORF	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	ENST00000430145.3_1_19:49166463-49183997:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1741821169853	2	458.771126	915.527698	4.3843	0.0020114	-0.40432	-0.00018549	3.98	0.0018259	458.7706984510226	93.167	0.4247	94.039	93.769	94.194	0.87176					18	12	2	0	0	0	0.097511	1	39178	39178		11.64	0	1	615790			17144	6494	8137	8175	20144	20144					0.06655535837444404
LEHVRYFL	8	Unmodified	_LEHVRYFL_					0	0	0		nc|ENSG00000166484|Q13164-4|MAPK7;ENST00000570306.5_1_17:19283765-19285121:+|nuORF;nc|ENSG00000166484|Q13164-3|MAPK7;ENST00000490660.2_1_17:19282213-19285121:+|nuORF;nc|ENSG00000166484|Q13164-2|MAPK7;ENSG00000166484|ENST00000395604|MAPK7	nc|ENSG00000166484|Q13164-4|MAPK7	nc|ENSG00000166484|Q13164-4|MAPK7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.3273803591728	2	538.798009	1075.58147	2.7763	0.0014959	-1.1414	-0.000615	1.6349	0.00088086	538.7969005777294	85.46	0.14313	86.587	86.46	86.603	1.1265					8	5	2	0	0	0	2.3239	1	35874	35874		10.183	1.5901	1	5364600			17145	3906	8138	8176	20145	20145					0.046697530598066805
LEIENEDLKER	11	Unmodified	_LEIENEDLKER_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA;ENST00000559156.5_1_15:70968828-70976706:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3528930544853	2	694.356813	1386.69907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.56	1	80.851	80.351	81.351	0.29056								0	0	0	0.63774	1	33678	33678		7.609	1.8771	1				17146	2792	8139	8177	20146	20146					0.021191963472801945
LEILEIPQL	9	Unmodified	_LEILEIPQL_					0	0	0		ENSG00000213380|ENST00000306875|COG8	ENSG00000213380|ENST00000306875|COG8	ENSG00000213380|ENST00000306875|COG8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.3246337771416	2	534.320983	1066.62741	5.6942	0.0030425	1.2727	0.00068002	6.9669	0.0037225	534.3222287557556	89.123	0.51668	90.143	89.784	90.3	1.0199					33	15	3	0	0	0	0.59203	1	37540	37540		11.64	1.5664	1	2694300			17147	5216	8140	8178	20147	20147					0.09676353451391151
LEILSLHRIKK	11	Unmodified	_LEILSLHRIKK_					0	0	0			REV__nc|ENSG00000088756|Q9P2N2-3|ARHGAP28	REV__nc|ENSG00000088756|Q9P2N2-3|ARHGAP28	MSMS	GG20161007_CRH_Patient100_W632_02	4	675.4369384646416	2	675.435004	1348.85546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.27	1	112.41	111.91	112.91	0.14912								0	0	0	0.63775	1	48641	48641		1.3295	0	1		+		17148	8877	8141	8179	20148	20148					0.19498151099060124
LEIPENPLEV	10	Unmodified	_LEIPENPLEV_					0	0	0		tr|A0A7D7A4Z7|A0A7D7A4Z7_9CLOTCholoylglycinehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03995PE=3SV=1	tr|A0A7D7A4Z7|A0A7D7A4Z7_9CLOTCholoylglycinehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03995PE=3SV=1	tr|A0A7D7A4Z7|A0A7D7A4Z7_9CLOTCholoylglycinehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03995PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8105956912041	2	576.810979	1151.6074	2.2551	0.0013008	-2.3621	-0.0013625	-0.10701	-6.1722E-05	576.8090472973165	78.474	0.43476	80.209	79.978	80.413	1.735					25	13	3	0	0	0	0.77604	1	32910	32910		14.838	0.93222	1	2093300			17149	17293	8142	8180	20149	20149					0.0376655772072354
LEIPHVLAI	9	Unmodified	_LEIPHVLAI_					0	0	0			REV__tr|A0A553STX8|A0A553STX8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05930PE=4SV=1	REV__tr|A0A553STX8|A0A553STX8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05930PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	502.7416564822197	2	502.810585	1003.60662	1.5771	0.000793	1.2357	0.00062131	2.8128	0.0014143	503.31078338529835	65.215	0.4653	67.124	66.815	67.28	1.9085					25	14	2	0	0	0	0.11463	1	27253	27253		12.532	0	1	1026500	+		17150	15268	8143	8181	20150	20150					0.10495807862366746
LEIPNDVIL	9	Unmodified	_LEIPNDVIL_					0	0	0		tr|A0A7D6ZW53|A0A7D6ZW53_9CLOTSporulationproteinYqfCOS=ClostridiumintestinaleOX=36845GN=yqfCPE=4SV=1	tr|A0A7D6ZW53|A0A7D6ZW53_9CLOTSporulationproteinYqfCOS=ClostridiumintestinaleOX=36845GN=yqfCPE=4SV=1	tr|A0A7D6ZW53|A0A7D6ZW53_9CLOTSporulationproteinYqfCOS=ClostridiumintestinaleOX=36845GN=yqfCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2994262576103	2	513.297507	1024.58046	3.6525	0.0018748	-1.1774	-0.00060436	2.4751	0.0012705	513.2969826692429	91.385	0.46597	92.751	92.627	93.093	1.366					34	14	3	0	0	0	0.30098	1	38586	38586		25.399	9.5521	1	3936600			17151	17164	8144	8182	20151	20151					0.06915493900260117
LEIQLKARERA	11	Unmodified	_LEIQLKARERA_					0	0	0			REV__ENSG00000113368|ENST00000261366|LMNB1	REV__ENSG00000113368|ENST00000261366|LMNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8982421755791	2	663.896243	1325.77793	3.1315	0.002079	0.016293	1.0817E-05	3.1478	0.0020898	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	1.0131	2	34634	34383;34634		2.9952	0.26005	1	4734100	+		17152	9381	8145	8183	20152;20153	20153					0.12807513162874784
LEKAGNIK	8	Unmodified	_LEKAGNIK_					0	0	0		ENST00000399075.6_1_4:120219332-120219395:-|nuORF	ENST00000399075.6_1_4:120219332-120219395:-|nuORF	ENST00000399075.6_1_4:120219332-120219395:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7639648318291	2	436.763635	871.512717	0.0463	2.0222E-05	0.99752	0.00043568	1.0438	0.0004559	436.76395062794705	12.795	0.12792	13.489	13.408	13.536	0.69396					6	3	2	0	0	0	0.60362	1	5320	5320		39.957	0	1	676900			17153	6333	8146	8184	20154	20154					0.07182088760100669
LEKAGNIK	8	Unmodified	_LEKAGNIK_					0	0	0		ENST00000399075.6_1_4:120219332-120219395:-|nuORF	ENST00000399075.6_1_4:120219332-120219395:-|nuORF	ENST00000399075.6_1_4:120219332-120219395:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7647582888603	2	436.763635	871.512717	0.19788	8.6426E-05	0.87993	0.00038432	1.0778	0.00047075	436.7640355110847	12.559	0.12006	13.347	13.275	13.395	0.78751					5	3	2	0	0	0	0.67986	1	5210	5210		32.305	0	1	686760			17154	6333	8146	8184	20155	20155					0.07182088760100669
LEKCKQLLRQR	11	Unmodified	_LEKCKQLLRQR_					0	0	0			REV__ENST00000475540.1_1_9:72938948-72959203:+|nuORF	REV__ENST00000475540.1_1_9:72938948-72959203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9236938357353	2	707.919195	1413.82384	2.5402	0.0017982	2.8761	0.002036	5.4162	0.0038342	707.9210324951113	87.079	1.3768	87.322	87.17	88.547	0.24387					87	46	3	0	0	0	1.0369	1	36832	36832		2.7352	0.23671	1	5000800	+		17155	11753	8147	8185	20156	20156					0.13347835073454917
LEKDDLDFP	9	Unmodified	_LEKDDLDFP_					0	0	0		nc|ENSG00000185482|Q96MF2-3|STAC3;nc|ENSG00000185482|Q96MF2-2|STAC3;ENSG00000185482|ENST00000332782|STAC3	nc|ENSG00000185482|Q96MF2-3|STAC3	nc|ENSG00000185482|Q96MF2-3|STAC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2697631716728	2	546.266404	1090.51826	2.1279	0.0011624	1.2129	0.00066254	3.3407	0.0018249	546.2670538523209	39.21	0.38116	40.506	40.319	40.701	1.2961					28	11	3	0	0	0	0.42305	1	16416	16416		19.257	0	1	3050700			17156	4748	8148	8186	20157	20157					-0.02338277238777664
LEKDRVALRR	10	Unmodified	_LEKDRVALRR_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;ENST00000465291.1_1_1:17296285-17297265:+|nuORF;nc|ENSG00000058453|Q5TZA2-2|CROCC	ENSG00000058453|ENST00000375541|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3831664919853	2	628.383303	1254.75205	1.7095	0.0010742	-0.070005	-4.399E-05	1.6395	0.0010302	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.89803	1	33809	33809		1.3295	0.80477	1	7710600			17157	736	8149	8187	20158	20158					0.13486663711250912
LEKEQREQKRK	11	Unmodified	_LEKEQREQKRK_					0	0	0		tr|A0A553SQS4|A0A553SQS4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07215PE=4SV=1	tr|A0A553SQS4|A0A553SQS4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07215PE=4SV=1	tr|A0A553SQS4|A0A553SQS4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07215PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	736.4215576052666	2	736.420614	1470.82667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.25	1	102.44	101.94	102.94	0.19076								0	0	0	0.63774	1	43000	43000		7.609	0.50723	1				17158	16526	8150	8188	20159	20159					0.1100938173196937
LEKFFPYLQKR	11	Unmodified	_LEKFFPYLQKR_					0	0	0			REV__ENSG00000203734|ENST00000541398|ECT2L	REV__ENSG00000203734|ENST00000541398|ECT2L	MSMS	GG20161007_CRH_Patient100_W632_02	4	734.8572875857353	2	734.919187	1467.82382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.066	1	98.323	97.823	98.823	0.25636								0	0	0	0.63775	1	41259	41259		5.2969	0	1		+		17159	11763	8151	8189	20160	20160					0.10862158345116768
LEKHYLFLIKV	11	Unmodified	_LEKHYLFLIKV_					0	0	0		ENST00000464029.5_1_7:105732128-105732209:-|nuORF	ENST00000464029.5_1_7:105732128-105732209:-|nuORF	ENST00000464029.5_1_7:105732128-105732209:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	701.8319579958916	2	701.92648	1401.83841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.035	1	99.26	98.76	99.76	0.22545								0	0	0	0.63774	1	41672	41672		7.609	2.3121	1				17160	6690	8152	8190	20161	20161					0.15356230493262046
LEKILNVNIRQ	11	Unmodified	_LEKILNVNIRQ_					0	0	0		tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	670.4108764529228	2	670.406444	1338.79833	2.9764	0.0019954	3.5652	0.0023901	6.5417	0.0043856	670.4086232480175	96.272	0.18293	96.674	96.577	96.76	0.40208					12	5	3	0	0	0	1.0191	1	40508	40508		2.9952	0	1	2433700			17161	16851	8153	8191	20162	20162					0.1424868382268869
LEKIQEKLVEV	11	Unmodified	_LEKIQEKLVEV_					0	0	0			REV__ENSG00000196428|ENST00000688009|TSC22D2	REV__ENSG00000196428|ENST00000688009|TSC22D2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	663.8967773318291	2	664.39521	1326.77587	2.4661	0.0016385	2.6265	0.0017451	5.0926	0.0033835	664.3966287611352	83.018	0.52087	83.018	82.677	83.198	0					33	16	3	0	0	0	0.14606	1	34573	34573		2.7352	0.67545	1	2335100	+		17162	11634	8154	8192	20163	20163					0.12555039634412424
LEKIRDLRTR	10	Unmodified	_LEKIRDLRTR_					0	0	0		sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1;sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3974487185478	2	650.39641	1298.77827	2.4864	0.0016171	-1.3831	-0.00089957	1.1033	0.00071756	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	0.89803	1	33754	33754		1.4819	0	1	5912000			17163	15997	8155	8193	20164	20164					0.140829328827067
LEKIRKTQRQ	10	Unmodified	_LEKIRKTQRQ_					0	0	0		nc|ENSG00000140367|Q8WVN8-2|UBE2Q2;nc|ENSG00000140367|Q8WVN8-4|UBE2Q2;nc|ENSG00000140367|Q8WVN8-3|UBE2Q2;ENSG00000140367|ENST00000267938|UBE2Q2	nc|ENSG00000140367|Q8WVN8-2|UBE2Q2	nc|ENSG00000140367|Q8WVN8-2|UBE2Q2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3978759646416	2	650.39641	1298.77827	2.3021	0.0014973	0.06697	4.3557E-05	2.3691	0.0015408	650.3960288834429	78.297	1.3522	79.564	78.809	80.161	1.2668					81	43	3	0	0	0	0.89803	1	32874	32874		1.4819	0	1	2143900			17164	2911	8156	8194	20165	20165					0.14082932882729438
LEKKGPQGVR	10	Unmodified	_LEKKGPQGVR_					0	0	0		CON__P05784	CON__P05784	CON__P05784	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.0167114138603	2	556.332747	1110.65094	3.4499	0.0019193	2.5826	0.0014368	6.0325	0.0033561	556.3338117828289	98.897	0.097649	99.094	99.013	99.11	0.19767					8	3	3	0	0	0	0.12549	1	41612	41612		2.9952	0.69251	1	1460300		+	17165	342	8157	8195	20166	20166					0.10004212008584545
LEKKKKKYK	9	Unmodified	_LEKKKKKYK_					0	0	0			REV__nc|ENSG00000170004|Q12873-2|CHD3	REV__nc|ENSG00000170004|Q12873-2|CHD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.8929321169853	2	596.892441	1191.77033	1.5735	0.00093919	-1.3403	-0.00079999	0.23321	0.0001392	596.8920065964965	106.02	0.14156	106.02	105.93	106.07	0					18	6	4	0	0	0	0.83753	1	45133	45133		1.8442	0.36234	1	120230000	+		17166	10971	8158	8196	20167	20167					0.1821140563326935
LEKKKKKYK	9	Unmodified	_LEKKKKKYK_					0	0	0			REV__nc|ENSG00000170004|Q12873-2|CHD3	REV__nc|ENSG00000170004|Q12873-2|CHD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.8931762576103	2	596.892441	1191.77033	1.5731	0.00093894	-0.011195	-6.682E-06	1.5619	0.00093226	596.8921663297065	107.48	0.17905	107.48	107.37	107.55	0					21	8	3	0	0	0	0.83753	1	46060	46060		1.8442	0.36234	1	61641000	+		17167	10971	8158	8196	20168	20168					0.1821140563326935
LEKKKKKYK	9	Unmodified	_LEKKKKKYK_					0	0	0			REV__nc|ENSG00000170004|Q12873-2|CHD3	REV__nc|ENSG00000170004|Q12873-2|CHD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.8931762576103	2	596.892441	1191.77033	2.6441	0.0015782	-1.832	-0.0010935	0.81203	0.00048469	596.8915711003635	105.97	0.14495	106.03	105.96	106.1	0.05455					21	6	4	0	0	0	0.83753	1	45050	45050		1.8442	0.19162	1	164090000	+		17168	10971	8158	8196	20169	20169					0.1821140563326935
LEKKKKKYK	9	Unmodified	_LEKKKKKYK_					0	0	0			REV__nc|ENSG00000170004|Q12873-2|CHD3	REV__nc|ENSG00000170004|Q12873-2|CHD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	596.892441	1191.77033	3.1998	0.0019099	-2.1691	-0.0012947	1.0307	0.00061523	596.891025075133	107.42	0.22824	107.58	107.47	107.7	0.15781	0.0445	-0.0010423	NaN	1.8442	45	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	429190000	+		17169	10971	8158	8196							0.1821140563326935
LEKKKLLKELW	11	Unmodified	_LEKKKLLKELW_					0	0	0		ENSG00000130921|ENST00000253233|MTRFR	ENSG00000130921|ENST00000253233|MTRFR	ENSG00000130921|ENST00000253233|MTRFR	MSMS	GG20161007_CRH_Patient100_W632_02	4	714.4540283083916	2	714.452862	1426.89117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.98	1	116.13	115.63	116.63	0.15228								0	0	0	0.63775	1	50135	50135		0.35063	0	1				17170	2469	8159	8197	20170	20170					0.19480188556076428
LEKKLLHIYKK	11	Unmodified	_LEKKLLHIYKK_					0	0	0			REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	706.9556762576103	2	706.95303	1411.89151	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.87	1	105.92	105.42	106.42	0.05455								0	0	0	0.63775	1	44992	44992		2.7352	2.7352	1		+		17171	15850	8160	8198	20171	20171					0.20203608275937768
LEKKLLHIYKK	11	Unmodified	_LEKKLLHIYKK_					0	0	0			REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	706.9556762576103	2	706.95303	1411.89151	2.6997	0.0019086	3.2555	0.0023015	5.9553	0.0042101	706.9550568936562	105.85	0.12095	105.9	105.82	105.94	0.05455					11	5	3	0	0	0	0.14606	1	44992	44992		2.7352	1.5419	1	15392000	+		17172	15850	8160	8198	20172	20172					0.20203608275937768
LEKKLLHIYKK	11	Unmodified	_LEKKLLHIYKK_					0	0	0			REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	706.95303	1411.89151	1.4176	0.0010021	5.5033	0.0038905	6.9208	0.0048927	706.9564457234401	105.88	0.097054	105.88	105.81	105.91	0	-0.042514	0.0015675	NaN	2.7352	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18280000	+		17173	15850	8160	8198							0.20203608275937768
LEKKLLHIYKK	11	Unmodified	_LEKKLLHIYKK_					0	0	0			REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	706.95303	1411.89151	2.6944	0.0019048	4.9491	0.0034988	7.6434	0.0054036	706.9562104795876	105.8	0.14857	105.96	105.89	106.04	0.1586	0.035088	0.00078396	NaN	2.7352	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73037000	+		17174	15850	8160	8198							0.20203608275937768
LEKKLLHIYKK	11	Unmodified	_LEKKLLHIYKK_					0	0	0			REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	REV__tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	706.95303	1411.89151	2.5685	0.0018158	3.8835	0.0027455	6.452	0.0045613	706.9555142169343	105.79	0.13092	105.96	105.88	106.01	0.16679	0.029645	-0.00072264	NaN	2.7352	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93737000	+		17175	15850	8160	8198							0.20203608275937768
LEKKTRRQY	9	Unmodified	_LEKKTRRQY_					0	0	0			REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	REV__nc|ENSG00000231991|A6NMY6|ANXA2P2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3569824099541	2	611.356754	1220.69895	2.1106	0.0012903	-1.9669	-0.0012025	0.14363	8.781E-05	611.3552112816064	78.111	0.78645	78.111	77.749	78.535	0					45	24	2	0	0	0	0.85068	1	32575	32575		0.45834	0	1	1005400	+		17176	11362	8161	8199	20173	20173					0.09743285928607293
LEKKVGKK	8	Unmodified	_LEKKVGKK_					0	0	0			REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.3124877810478	2	465.310752	928.606951	3.3605	0.0015637	1.0687	0.0004973	4.4292	0.002061	465.31101960080855	109.2	0.32674	109.36	109.21	109.54	0.15898					37	15	4	0	0	0	0.89051	1	47372	47372		2.3027	0	1	54991000	+		17177	8323	8162	8200	20174	20174					0.13979227582240128
LEKKVGKK	8	Unmodified	_LEKKVGKK_					0	0	0			REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	465.310752	928.606951	1.5491	0.00072083	0.53482	0.00024886	2.084	0.00096969	465.3110906613125	109.24	0.16313	109.24	109.17	109.33	0	-0.067728	9.4876E-05	NaN	2.3027	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5700200	+		17178	8323	8162	8200							0.13979227582240128
LEKKVGKK	8	Unmodified	_LEKKVGKK_					0	0	0			REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	465.310752	928.606951	3.4298	0.0015959	-0.50238	-0.00023376	2.9274	0.0013622	465.31065626920076	109.25	0.18741	109.3	109.17	109.36	0.048843	-0.0038051	-0.00087036	NaN	2.3027	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4199400	+		17179	8323	8162	8200							0.13979227582240128
LEKKVGKK	8	Unmodified	_LEKKVGKK_					0	0	0			REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	465.310752	928.606951	3.3605	0.0015637	1.0687	0.0004973	4.4292	0.002061	465.31101960080855	109.2	0.32674	109.36	109.21	109.54	0.15898	0.059993	0.00059176	NaN	2.3027	37	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54991000	+		17180	8323	8162	8200							0.13979227582240128
LEKKVGKK	8	Unmodified	_LEKKVGKK_					0	0	0			REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	REV__ZFP42|p.K198Tfs*5|1|0.1|ENSG00000179059|chr4:188003399-188003400|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.310752	928.606951	3.5439	0.001649	0.36315	0.00016898	3.907	0.001818	465.3107584799024	109.16	0.357	109.31	109.13	109.49	0.1548	0.011541	-6.4885E-05	NaN	2.3027	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51929000	+		17181	8323	8162	8200							0.13979227582240128
LEKLQREKDKK	11	Unmodified	_LEKLQREKDKK_					0	0	0			REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.9261352419853	2	707.922458	1413.83036	2.671	0.0018908	-0.35901	-0.00025415	2.3119	0.0016367	707.9211849255861	85.084	1.3599	85.084	84.368	85.728	0					88	42	3	0	0	0	1.0391	1	35459	35459		1.1933	0	1	1400800	+		17182	12007	8163	8201	20175	20175					0.14000051505809097
LEKLQREKDKK	11	Unmodified	_LEKLQREKDKK_					0	0	0			REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2850524783134	3	472.284064	1413.83036	3.3013	0.0015591	-1.0218	-0.00048259	2.2795	0.0010766	472.28355572451534	84.851	1.6059	85.112	84.533	86.139	0.26083					93	50	3	0	0	0	1.0391	1	35572	35572		0.40827	0	1	1293100	+		17183	12007	8163	8201	20176	20176					0.14000051505809097
LEKLQREKDKK	11	Unmodified	_LEKLQREKDKK_					0	0	0			REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	REV__ENST00000296885.7_1_6:88117749-88144792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9236328005791	2	707.922458	1413.83036	2.5401	0.0017982	-1.7326	-0.0012266	0.80753	0.00057167	707.9210324951113	87.079	1.3768	87.322	87.17	88.547	0.24387					87	46	3	0	0	0	1.0391	1	36783	36783		1.1933	0	1	5000800	+		17184	12007	8163	8201	20177	20177					0.14000051505809097
LEKNKRFSR	9	Unmodified	_LEKNKRFSR_					0	0	0			REV__tr|A0A553SLZ6|A0A553SLZ6_NIACIDUF3278domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21615PE=4SV=1	REV__tr|A0A553SLZ6|A0A553SLZ6_NIACIDUF3278domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21615PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3443481326103	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.8432	1	32704	32704		1.4819	0.15237	1	9065200	+		17185	15001	8164	8202	20178	20178					0.09147016757151505
LEKNKRFSR	9	Unmodified	_LEKNKRFSR_					0	0	0			REV__tr|A0A553SLZ6|A0A553SLZ6_NIACIDUF3278domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21615PE=4SV=1	REV__tr|A0A553SLZ6|A0A553SLZ6_NIACIDUF3278domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21615PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3439208865166	2	589.343646	1176.67274	2.514	0.0014816	-0.22029	-0.00012983	2.2938	0.0013518	589.3434624672165	77.749	1.0173	79.03	78.631	79.649	1.2809					53	32	3	0	0	0	0.83753	2	32470	32470;32521		1.8442	0	1	2852800	+		17186	15001	8164	8202	20179;20180	20179					0.09147016757151505
LEKNKVDLIIL	11	Unmodified	_LEKNKVDLIIL_					0	0	0		tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	649.4114868044853	2	649.408121	1296.80169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.764	1	99.836	99.336	100.34	0.072716								0	0	0	0.63775	1	41773	41773		2.4985	1.0166	1				17187	16863	8165	8203	20181	20181					0.1651593387673529
LEKQRLEQQLL	11	Unmodified	_LEKQRLEQQLL_					0	0	0		HDAC5|p.P353Nfs*31|1|0.33|ENSG00000108840|chr17:44091808-44091809|-/CACTGCAAGCTCCGCCTCCCAGGTTC|frameshift_variant;nc|ENSG00000108840|Q9UQL6-2|HDAC5;ENSG00000108840|ENST00000682912|HDAC5;nc|ENSG00000108840|Q9UQL6-3|HDAC5	HDAC5|p.P353Nfs*31|1|0.33|ENSG00000108840|chr17:44091808-44091809|-/CACTGCAAGCTCCGCCTCCCAGGTTC|frameshift_variant	HDAC5|p.P353Nfs*31|1|0.33|ENSG00000108840|chr17:44091808-44091809|-/CACTGCAAGCTCCGCCTCCCAGGTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.6093932986259	3	466.608548	1396.80381	2.8575	0.0013333	-0.47665	-0.00022241	2.3809	0.0011109	466.60804134969914	85.084	1.703	85.084	84.399	86.103	0					87	53	2	0	0	0	1.0373	1	35462	35462		0.32927	0.23443	1	1342500			17188	1650	8166	8204	20182	20182					0.12128362614521393
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8976318240166	2	663.894323	1325.77409	2.2498	0.0014936	1.0488	0.00069632	3.2986	0.00219	663.8951592135703	81.369	1.3111	81.369	80.604	81.915	0					108	42	3	0	0	0	1.0174	4	33721	33721;33773;33890;34059		2.7352	1.4057	1	2804200	+		17189	8952	8167	8205	20183;20184;20185;20186	20183					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.9008056521416	2	663.894323	1325.77409	2.3625	0.0015684	1.7972	0.0011931	4.1597	0.0027616	663.8961210891454	82.059	0.69994	82.059	81.915	82.615	0					49	22	3	0	0	0	1.0174	1	34162	34162		2.7352	1.5419	1	1314900	+		17190	8952	8167	8205	20187	20187					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8967773318291	2	663.894323	1325.77409	2.556	0.0016969	1.8961	0.0012588	4.4521	0.0029557	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0174	2	34573	34523;34573		2.7352	1.4057	1	6935600	+		17191	8952	8167	8205	20188;20189	20189					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8978149294853	2	663.894323	1325.77409	2.1919	0.0014552	2.3767	0.0015779	4.5686	0.0030331	663.8957978467892	82.842	0.67295	83.113	82.695	83.368	0.27029					64	21	4	0	0	0	1.0174	1	34571	34571		2.7352	1.5419	1	4141500	+		17192	8952	8167	8205	20190	20190					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8991577029228	2	663.894323	1325.77409	2.4525	0.0016282	2.8156	0.0018693	5.2681	0.0034975	663.895955838561	80.436	1.3194	81.688	80.769	82.088	1.2512					99	42	3	0	0	0	1.0174	1	33785	33785		2.7352	1.4057	1	2397800	+		17193	8952	8167	8205	20191	20191					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8974487185478	2	663.894323	1325.77409	3.1315	0.002079	2.9082	0.0019307	6.0397	0.0040097	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	1.0174	1	34534	34534		2.7352	1.4057	1	4734100	+		17194	8952	8167	8205	20192	20192					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8970825076103	2	663.894323	1325.77409	1.2234	0.00081219	2.2997	0.0015268	3.5231	0.002339	663.8957189276996	79.95	1.2678	81.667	80.612	81.879	1.7167					73	40	3	0	0	0	1.0174	1	33438	33438		2.7352	1.2533	1	1946900	+		17195	8952	8167	8205	20193	20193					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8978759646416	2	663.894323	1325.77409	3.0629	0.0020334	2.7211	0.0018065	5.784	0.0038399	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0174	2	34361	34361;34414		2.7352	1.4057	1	4887400	+		17196	8952	8167	8205	20194;20195	20194					0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	663.894323	1325.77409	2.9846	0.0019815	2.3375	0.0015519	5.3222	0.0035334	663.896362796064	81.136	0.70981	82.369	82.133	82.842	1.2332	0.23324	0.00039306	NaN	2.7352	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	994110	+		17197	8952	8167	8205							0.12423707344828472
LEKQVILQPMK	11	Unmodified	_LEKQVILQPMK_					0	0	0			REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	REV__nc|ENSG00000102290|Q9BZA7-7|PCDH11X	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	663.894323	1325.77409	1.1076	0.00073535	1.3797	0.00091595	2.4873	0.0016513	663.8948809826917	80.232	0.50397	81.948	81.789	82.293	1.7167	-0.18749	-0.0008788	NaN	2.7352	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2169600	+		17198	8952	8167	8205							0.12423707344828472
LEKRKKIFNI	10	Unmodified	_LEKRKKIFNI_					0	0	0		tr|A0A7D6VYI1|A0A7D6VYI1_9CLOTDegT/DnrJ/EryC1/StrSaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16905PE=3SV=1	tr|A0A7D6VYI1|A0A7D6VYI1_9CLOTDegT/DnrJ/EryC1/StrSaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16905PE=3SV=1	tr|A0A7D6VYI1|A0A7D6VYI1_9CLOTDegT/DnrJ/EryC1/StrSaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16905PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	644.9093505740166	2	644.908622	1287.80269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.255	1	96.657	96.157	97.157	0.40208								0	0	0	0.66166	1	40491	40491		1.6526	0	1				17199	17001	8168	8206	20196	20196					0.17030193036293895
LEKRQRKKRLE	11	Unmodified	_LEKRQRKKRLE_					0	0	0		nc|ENSG00000078246|O75386-2|TULP3;ENSG00000078246|ENST00000448120|TULP3;nc|ENSG00000078246|O75386-3|TULP3	nc|ENSG00000078246|O75386-2|TULP3	nc|ENSG00000078246|O75386-2|TULP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	742.4611083865166	2	742.462616	1482.91068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.089	1	96.089	95.589	96.589	0								0	0	0	0.63775	1	40173	40173		0.35063	0	1				17200	974	8169	8207	20197	20197					0.1885395761955806
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	684.9424926638603	2	684.942185	1367.86982	1.4496	0.00099287	0.015119	1.0356E-05	1.4647	0.0010032	684.9421468379671	105.9	0.11617	105.9	105.84	105.95	0					13	5	3	0	0	0	0.89803	1	45074	45074		1.4819	0.28856	1	40040000	+		17201	10898	8170	8208	20198	20198					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	684.9435912966728	2	684.942185	1367.86982	2.6872	0.0018406	-0.46363	-0.00031756	2.2236	0.001523	684.941326468464	105.86	0.1217	105.92	105.84	105.96	0.05455					17	5	4	0	0	0	0.89803	1	44989	44989		1.4819	0.28856	1	32936000	+		17202	10898	8170	8208	20199	20199					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	684.9443237185478	2	684.942185	1367.86982	2.8331	0.0019405	-0.55157	-0.00037779	2.2815	0.0015627	684.941533252845	105.85	0.13348	106.01	105.92	106.06	0.15859					26	6	5	0	0	0	0.89803	1	45161	45161		1.4819	0.15237	1	184400000	+		17203	10898	8170	8208	20200	20200					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.9667846560478	3	456.963882	1367.86982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.83	1	105.98	105.48	106.48	0.15859								0	0	0	0.66176	1	45169	45169		0.62683	0.21856	1		+		17204	10898	8170	8208	20201	20201					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	684.9431640505791	2	684.942185	1367.86982	2.7148	0.0018595	-1.7022	-0.0011659	1.0126	0.00069357	684.9407302876995	105.82	0.15131	105.99	105.9	106.05	0.16679					24	7	5	0	0	0	0.89803	1	45095	45095		1.4819	0.28856	1	150070000	+		17205	10898	8170	8208	20202	20202					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.9662963747978	3	456.963882	1367.86982	3.4802	0.0015903	2.2591	0.0010323	5.7393	0.0026226	456.96451666594135	105.82	0.15131	105.99	105.9	106.05	0.16679					20	7	4	0	0	0	0.89803	1	45099	45099		0.62683	0.21856	1	53766000	+		17206	10898	8170	8208	20203	20203					0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	684.942185	1367.86982	1.4496	0.00099287	0.015119	1.0356E-05	1.4647	0.0010032	684.9421468379671	105.9	0.11617	105.9	105.84	105.95	0	-0.050867	0.0010997	NaN	1.4819	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40040000	+		17207	10898	8170	8208							0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	684.942185	1367.86982	2.6872	0.0018406	-0.46363	-0.00031756	2.2236	0.001523	684.941326468464	105.86	0.1217	105.92	105.84	105.96	0.05455	-0.035819	0.00044387	NaN	1.4819	17	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32936000	+		17208	10898	8170	8208							0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	684.942185	1367.86982	2.8331	0.0019405	-0.55157	-0.00037779	2.2815	0.0015627	684.941533252845	105.85	0.13348	106.01	105.92	106.06	0.15859	0.052907	0.00032341	NaN	1.4819	26	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	184400000	+		17209	10898	8170	8208							0.20059661090567715
LEKRRAKRRR	10	Unmodified	_LEKRRAKRRR_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	684.942185	1367.86982	2.7148	0.0018595	-1.7022	-0.0011659	1.0126	0.00069357	684.9407302876995	105.82	0.15131	105.99	105.9	106.05	0.16679	0.033779	-0.0012528	NaN	1.4819	24	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150070000	+		17210	10898	8170	8208							0.20059661090567715
LEKRRAKRRRT	11	Unmodified	_LEKRRAKRRRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	735.4640991091728	2	735.466024	1468.9175	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.25	1	98.477	97.977	98.977	0.22776								0	0	0	0.63775	1	41352	41352		2.7352	1.4057	1		+		17211	10898	8171	8209	20204	20204					0.20179315290761224
LEKRRRRKQER	11	Unmodified	_LEKRRRRKQER_					0	0	0		ENST00000468290.1_1_9:136198707-136199617:-|nuORF;ENSG00000148296|ENST00000372022|SURF6	ENST00000468290.1_1_9:136198707-136199617:-|nuORF	ENST00000468290.1_1_9:136198707-136199617:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	777.9732543826103	2	777.974213	1553.93387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.28	1	112.45	111.95	112.95	0.16914								0	0	0	0.63775	1	48714	48714		1.3295	0	1				17212	3201	8172	8210	20205	20205					0.17906396456874063
LEKTRKPFLNR	11	Unmodified	_LEKTRKPFLNR_					0	0	0			REV__ENSG00000108239|ENST00000225235|TBC1D12	REV__ENSG00000108239|ENST00000225235|TBC1D12	MSMS	GG20161007_CRH_Patient100_W632_01	3	701.4396850466728	2	701.419885	1400.82522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.919	1	100.12	99.617	100.62	0.19767								0	0	0	0.63774	1	42056	42056		8.1555	2.8586	1		+		17213	9252	8173	8211	20206	20206					0.14083792433893905
LEKVRKTQKR	10	Unmodified	_LEKVRKTQKR_					0	0	0		ENSG00000181381|ENST00000682922|DDX60L;ENST00000503190.1_1_4:169317058-169322080:-|nuORF;DDX60L|p.R1229Pfs*17|1|0.04|ENSG00000181381|chr4:168394589-168394590|-/GAAGAGTAAAGGGTTATGACCAG|frameshift_variant;nc|ENSG00000181381|Q5H9U9-2|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	ENSG00000181381|ENST00000682922|DDX60L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2744628787041	3	429.273611	1284.799	3.0434	0.0013065	-1.0466	-0.00044928	1.9968	0.00085717	429.2730918306361	94.287	0.56697	94.432	94.133	94.7	0.14493					58	17	4	0	0	0	0.89803	1	39491	39491		0.62683	0	1	18456000			17214	4575	8174	8212	20207	20207					0.16799523262397997
LEKVRPHI	8	Unmodified	_LEKVRPHI_					0	0	0		ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	ENSG00000175809|ENST00000323684|CBLL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3051635622978	2	496.306001	990.597449	1.5765	0.0007824	-3.0886	-0.0015329	-1.5121	-0.00075047	496.3044338615781	80.391	0.5011	80.391	80.135	80.636	0					44	15	4	0	0	0	0.88587	1	33522	33522		5.2307	0	1	8018600			17215	4385	8175	8213	20208	20208					0.10177459296698999
LEKWMQKNVE	10	Unmodified	_LEKWMQKNVE_					0	0	0		ENST00000552572.1_1_12:104388057-104390611:-|nuORF;ENSG00000120820|ENST00000360814|GLT8D2	ENST00000552572.1_1_12:104388057-104390611:-|nuORF	ENST00000552572.1_1_12:104388057-104390611:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.5615417361259	3	435.560429	1303.65946	3.1012	0.0013508	-3.319	-0.0014456	-0.2178	-9.4864E-05	435.55954860683033	94.273	0.34322	94.417	94.228	94.571	0.14493					31	10	4	0	0	0	0.88508	1	39447	39447		3.0723	1.1659	1	1730900			17216	2119	8176	8214	20209	20209					0.019773978628563782
LEKYKLRFK	9	Unmodified	_LEKYKLRFK_					0	0	0			REV__tr|A0A7D6W360|A0A7D6W360_9CLOTDUF2087domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08735PE=4SV=1	REV__tr|A0A7D6W360|A0A7D6W360_9CLOTDUF2087domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.9236938357353	3	408.920286	1223.73903	3.8595	0.0015782	2.6636	0.0010892	6.5232	0.0026675	408.92131048066193	91.665	0.55401	92.601	92.307	92.861	0.93623					55	17	4	0	0	0	0.83753	1	38549	38549		0.96228	0	1	16028000	+		17217	15609	8177	8215	20210	20210					0.13610832599169953
LEKYKLRFK	9	Unmodified	_LEKYKLRFK_					0	0	0			REV__tr|A0A7D6W360|A0A7D6W360_9CLOTDUF2087domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08735PE=4SV=1	REV__tr|A0A7D6W360|A0A7D6W360_9CLOTDUF2087domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.9229003787041	3	408.920286	1223.73903	3.2781	0.0013405	3.2194	0.0013165	6.4975	0.002657	408.92148584637783	91.366	0.55666	92.732	92.406	92.963	1.366					57	17	4	0	0	0	0.83753	1	38439	38439		0.96228	0	1	15548000	+		17218	15609	8177	8215	20211	20211					0.13610832599169953
LEKYRKYL	8	Unmodified	_LEKYRKYL_					0	0	0			REV__tr|A0A553SU20|A0A553SU20_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_06160PE=4SV=1	REV__tr|A0A553SU20|A0A553SU20_NIACIMBLfoldmetallo-hydrolaseOS=NialliacirculansOX=1397GN=CEQ21_06160PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1009704470634	3	371.553603	1111.63898	0.42521	0.00015799	-0.75708	-0.0002813	-0.33186	-0.00012331	371.5533343571928	28.217	0.27425	29.992	29.818	30.092	1.7754					18	8	3	0	0	0	2.3239	1	11825	11825		0.40072	0	1	2583000	+		17219	15274	8178	8216	20212	20212					0.08762595265375239
LELCVAKYNK	10	Unmodified	_LELCVAKYNK_					0	0	0			REV__nc|ENSG00000240021|Q5T0J7-3|TEX35	REV__nc|ENSG00000240021|Q5T0J7-3|TEX35	MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8242675662041	2	590.823366	1179.63218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.773	1	76.094	75.594	76.594	0.32163								0	0	0	0.65836	1	31690	31690		6.7232	0	1		+		17220	11916	8179	8217	20213	20213					0.049549143224794534
LELFSFNRLF	10	Unmodified	_LELFSFNRLF_					0	0	0			REV__ENSG00000181499|ENST00000321252|OR6T1	REV__ENSG00000181499|ENST00000321252|OR6T1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	643.3537475466728	2	643.350606	1284.68666	3.0774	0.0019799	1.3449	0.00086525	4.4224	0.0028451	643.3520937329945	98.894	0.16245	99.091	99.013	99.175	0.19767					6	5	2	0	0	0	0.12539	1	41653	41653		4.3292	0	1	1254900	+		17221	11323	8180	8218	20214	20214					0.055702494655406554
LELIFDFFE	9	Unmodified	_LELIFDFFE_					0	0	0		ENSG00000125772|ENST00000379019|GPCPD1;ENST00000433031.1_1_7:57216973-57217525:-|nuORF	ENSG00000125772|ENST00000379019|GPCPD1	ENSG00000125772|ENST00000379019|GPCPD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	390.9234191775322	3	391.533986	1171.58013	0.7125	0.00027897	-0.33596	-0.00013154	0.37654	0.00014743	391.533790634281	88.409	0.42638	88.409	88.18	88.606	0					25	13	2	0	0	0	0.11901	1	36926	36926		2.7352	0.82882	1	4391600			17222	2277	8181	8219	20215	20215					0.0012007418038137985
LELKPEPE	8	Unmodified	_LELKPEPE_					0	0	0		ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2	ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.5142700076103	1	954.514239	953.506963	2.5985	0.0024803	-0.59082	-0.00056395	2.0077	0.0019163	954.5143372690037	86.423	1.1718	87.55	86.816	87.987	1.1265					88	46	4	0	0	0	0.76103	1	36089	36089		24.674	0	1	22208000			17223	7306;4152	8182	8220	20216	20216					0.028349454577551114
LELKPEPE	8	Unmodified	_LELKPEPE_					0	0	0		ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2	ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7626220583916	2	477.760758	953.506963	3.5948	0.0017175	-0.97554	-0.00046608	2.6193	0.0012514	477.76055017041807	86.422	0.54834	87.549	87.439	87.987	1.1265					52	20	4	0	0	0	0.88163	1	36475	36475		7.9102	0	1	12840000			17224	7306;4152	8182	8220	20217	20217					0.028349454577551114
LELKPEPE	8	Unmodified	_LELKPEPE_					0	0	0		ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2	ENST00000556539.5_1_12:56737175-56743495:-|nuORF;ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.5203124880791	1	954.514239	953.506963	4.1015	0.0039149	-1.5223	-0.001453	2.5792	0.0024619	954.5132327710587	86.032	0.5123	87.579	87.417	87.929	1.547					39	19	3	0	0	0	0.76103	1	36284	36284		24.674	0	1	10919000			17225	7306;4152	8182	8220	20218	20218					0.028349454577551114
LELSTYTK	8	Unmodified	_LELSTYTK_					0	0	0		ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	954.5179321169853	1	954.514239	953.506963	2.522	0.0024073	0.55983	0.00053436	3.0818	0.0029416	954.514964698338	87.585	0.93904	87.585	87.211	88.15	0					81	32	3	0	0	0	0.76103	2	36616	36616;36822		24.674	0	1	5632200			17226	6886	8183	8221	20219;20220	20219					0.0283494545776648
LELSTYTK	8	Unmodified	_LELSTYTK_					0	0	0		ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	ENST00000488236.5_1_3:9495468-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	954.5150634646416	1	954.514239	953.506963	2.6173	0.0024983	0.35067	0.00033472	2.968	0.002833	954.5143073389232	87.115	0.83083	87.359	87.124	87.955	0.24387					63	29	3	0	0	0	0.76103	1	36481	36481		24.674	0	1	7535900			17227	6886	8183	8221	20221	20221					0.0283494545776648
LELYYWQIDP	10	Unmodified	_LELYYWQIDP_					0	0	0		tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	670.3664428591728	2	670.332079	1338.6496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.235	1	99.46	98.96	99.96	0.22545								0	0	0	0.65836	1	41754	41754		6.7232	3.4419	1				17228	17170	8184	8222	20222	20222					-0.006174668708581521
LEMEKKEVL	9	Unmodified	_LEMEKKEVL_					0	0	0			REV__PPP1R36|p.Y199Sfs*18|1|0.05|ENSG00000165807|chr14:64574516-64574517|-/C|frameshift_variant	REV__PPP1R36|p.Y199Sfs*18|1|0.05|ENSG00000165807|chr14:64574516-64574517|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8116332888603	2	559.809925	1117.6053	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.087	1	71.41	70.91	71.91	0.32359								0	0	0	0.42693	1	29754	29754		3.9444	0.66309	1		+		17229	10796	8185	8223	20223	20223					0.05119805711319714
LEMLHGTV	8	Unmodified	_LEMLHGTV_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|108|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|108|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|108|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2367736697197	2	450.236396	898.458238	0.5836	0.00026276	0.2406	0.00010833	0.82419	0.00037108	450.2365801139563	16.894	0.72096	16.894	16.626	17.347	0					64	22	4	0	0	0	0.54738	2	6978	6978;7026		44.407	14.182	1	9703600			17230	7629	8186	8224	20224;20225	20224					0.004947536170334388
LENERNQYEWK	11	Unmodified	_LENERNQYEWK_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;PPFIBP2|p.G427Pfs*25|1|0.22|ENSG00000166387|chr11:7639774-7639789|GGGAAGCTTTCAGGAG/-|frameshift_variant;PPFIBP2|p.T424Lfs*33|1|0.26|ENSG00000166387|chr11:7639762-7639762|C/-|frameshift_variant	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	754.5310546755791	2	754.860054	1507.70556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.213	1	97.519	97.019	98.019	0.3062								0	0	0	0.63775	1	40892	40892		5.2969	0.39987	1				17231	3898	8187	8225	20226	20226					-0.027988657013338525
LENISLLSL	9	Unmodified	_LENISLLSL_					0	0	0		ENST00000356142.4_1_7:6426883-6431586:+|nuORF	ENST00000356142.4_1_7:6426883-6431586:+|nuORF	ENST00000356142.4_1_7:6426883-6431586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3003723025322	2	501.297507	1000.58046	1.952	0.00097853	3.55	0.0017796	5.502	0.0027581	501.2994545496881	63.529	0.25203	63.529	63.429	63.681	0					12	7	2	0	0	0	0.23535	1	26524	26524		29.082	0	1	874100			17232	5985	8188	8226	20227	20227					0.08019493900246744
LEPGVLFLV	9	Unmodified	_LEPGVLFLV_					0	0	0			REV__ENST00000375946.8_1_10:27443943-27444111:+|nuORF	REV__ENST00000375946.8_1_10:27443943-27444111:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8013488650322	2	493.799686	985.584819	3.3367	0.0016477	-0.38629	-0.00019075	2.9504	0.0014569	493.8000182324136	91.913	0.57945	93.24	92.989	93.568	1.3269					28	17	2	0	0	0	0.37357	1	38687	38687		21.747	2.3076	1	1922500	+		17233	12718	8189	8227	20228	20228					0.09145003113792427
LEPGVLFLV	9	Unmodified	_LEPGVLFLV_					0	0	0			REV__ENST00000375946.8_1_10:27443943-27444111:+|nuORF	REV__ENST00000375946.8_1_10:27443943-27444111:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	493.799686	985.584819	3.3367	0.0016477	-0.38629	-0.00019075	2.9504	0.0014569	493.8000182324136	91.913	0.57945	93.24	92.989	93.568	1.3269	-0.059084	0.00045525	NaN	21.747	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1922500	+		17234	12718	8189	8227							0.09145003113792427
LEPLLFLQV	9	Unmodified	_LEPLLFLQV_					0	0	0		ENSG00000164645|ENST00000297203|TEX47	ENSG00000164645|ENST00000297203|TEX47	ENSG00000164645|ENST00000297203|TEX47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2982055544853	2	536.326068	1070.63758	2.4463	0.001312	1.5329	0.00082211	3.9791	0.0021341	536.3264394383956	39.494	0.35233	40.804	40.586	40.938	1.3102					32	11	4	0	0	0	0.27148	1	16612	16612		26.884	0	1	10752000			17235	3787	8190	8228	20229	20229					0.10508961176606135
LEPLLLLLT	9	Unmodified	_LEPLLLLLT_					0	0	0			REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2284118533134	3	342.226604	1023.65798	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.4	1	106.45	105.95	106.95	0.05455								0	0	0	0.42693	1	45323	45323		1.0715	0.80244	1		+		17236	12775	8191	8229	20230	20230					0.14710131836420715
LEPLLLLLT	9	Unmodified	_LEPLLLLLT_					0	0	0			REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	REV__ENST00000381346.8_1_14:68144805-68144865:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	342.2278930544853	3	342.226604	1023.65798	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.33	1	106.49	105.99	106.99	0.16174								0	0	0	0.42693	1	45459	45459		1.0715	0.67075	1		+		17237	12775	8191	8229	20231	20231					0.14710131836420715
LEPNIIQPQ	9	Unmodified	_LEPNIIQPQ_					0	0	0			REV__CCDC87|p.E633Rfs*9|1|0.06|ENSG00000182791|chr11:66591120-66591120|T/-|frameshift_variant	REV__CCDC87|p.E633Rfs*9|1|0.06|ENSG00000182791|chr11:66591120-66591120|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.3860351443291	2	526.292756	1050.57096	4.1824	0.0022012	-0.98583	-0.00051884	3.1965	0.0016823	526.2919611962957	91.299	0.25213	92.281	92.133	92.385	0.98157					13	7	2	0	0	0	0.098208	1	38420	38420		18.146	4.2403	1	321000	+		17238	8184	8192	8230	20232	20232					0.04769725614710296
LEPNIIQPQ	9	Unmodified	_LEPNIIQPQ_					0	0	0			REV__CCDC87|p.E633Rfs*9|1|0.06|ENSG00000182791|chr11:66591120-66591120|T/-|frameshift_variant	REV__CCDC87|p.E633Rfs*9|1|0.06|ENSG00000182791|chr11:66591120-66591120|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.292756	1050.57096	3.7404	0.0019685	-2.8309	-0.0014899	0.90949	0.00047866	526.2907221213196	90.797	0.28451	92.163	92.027	92.311	1.366	-0.058997	-0.0012307	NaN	18.146	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421660	+		17239	8184	8192	8230							0.04769725614710296
LEQADLILA	9	Unmodified	_LEQADLILA_					0	0	0		ENSG00000130299|ENST00000324894|GTPBP3;nc|ENSG00000130299|Q969Y2-4|GTPBP3;nc|ENSG00000130299|Q969Y2-2|GTPBP3	ENSG00000130299|ENST00000324894|GTPBP3	ENSG00000130299|ENST00000324894|GTPBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2825500369072	2	493.281857	984.549162	2.6914	0.0013276	-1.8519	-0.00091351	0.83949	0.00041411	493.2805994419276	79.895	0.40128	81.147	80.955	81.357	1.2512					26	12	3	0	0	0	0.086433	1	33525	33525		53.833	15.859	1	2041000			17240	2422	8193	8231	20233	20233					0.05626920866143337
LEQEARKKQRR	11	Unmodified	_LEQEARKKQRR_					0	0	0		nc|ENSG00000005379|O95153-2|TSPOAP1;ENSG00000005379|ENST00000343736|TSPOAP1;nc|ENSG00000005379|O95153-3|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	nc|ENSG00000005379|O95153-2|TSPOAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2847778201103	3	481.283057	1440.82734	3.3696	0.0016217	-0.58445	-0.00028129	2.7851	0.0013404	481.2825655882529	85.8	0.4956	86.052	85.665	86.16	0.25227					22	15	2	0	0	0	1.0402	1	35881	35881		0.08335	0	1	1252000			17241	488	8194	8232	20234	20234					0.12456221171669313
LEQEQAAWTVQ	11	Unmodified	_LEQEQAAWTVQ_					0	0	0			REV__ENSG00000101997|ENST00000376227|CCDC22	REV__ENSG00000101997|ENST00000376227|CCDC22	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8830749392509	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.583	1	49.559	49.059	50.059	1.976								0	0	0	0.63775	1	19929	19929		0.50596	0	1		+		17242	9055	8195	8233	20235	20235					-0.013567270243811436
LEQKDFRLFH	10	Unmodified	_LEQKDFRLFH_					0	0	0		ENSG00000053328|ENST00000338882|METTL24	ENSG00000053328|ENST00000338882|METTL24	ENSG00000053328|ENST00000338882|METTL24	MSMS	GG20161007_CRH_Patient100_W632_02	4	666.8562499880791	2	666.856586	1331.69862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.656	1	97.912	97.412	98.412	0.25636								0	0	0	0.65894	1	41084	41084		6.2058	0	1				17243	707	8196	8234	20236	20236					0.04603866208731233
LEQKNKIYWYL	11	Unmodified	_LEQKNKIYWYL_					0	0	0			REV__tr|A0A553SJ90|A0A553SJ90_NIACITetRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16320PE=4SV=1	REV__tr|A0A553SJ90|A0A553SJ90_NIACITetRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16320PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	749.8153564333916	2	749.408652	1496.80275	2.6434	0.001981	1.7878	0.0013398	4.4312	0.0033208	749.4095639851712	99.852	0.14216	100.05	99.999	100.14	0.19767					5	4	2	0	0	0	0.14538	1	42053	42053		11.495	6.1978	1	1035500	+		17244	14889	8197	8235	20237	20237					0.07422148245632343
LEQLQNNQ	8	Unmodified	_LEQLQNNQ_					0	0	0			REV__chr19:13938006-13953119|385|21.02|0.96|4.46|-|ENST00000585607|PODNL1,PODNL1	REV__chr19:13938006-13953119|385|21.02|0.96|4.46|-|ENST00000585607|PODNL1,PODNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7483703494072	2	493.748713	985.482873	2.7338	0.0013498	-1.9242	-0.00095007	0.80962	0.00039975	493.74724080347977	82.997	0.36597	84.21	84.015	84.381	1.2125					27	11	3	0	0	0	0.84677	1	34818	34818		21.747	1.293	1	1710100	+		17245	8283	8198	8236	20238	20238					-0.010448949759052084
LERCLLEL	8	Carbamidomethyl (C)	_LERC(Carbamidomethyl (C))LLEL_	LERC(1)LLEL		LERC(57)LLEL		0	1	0		nc|ENSG00000030066|Q12769-2|NUP160	nc|ENSG00000030066|Q12769-2|NUP160	nc|ENSG00000030066|Q12769-2|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2939941287041	2	523.289159	1044.56377	3.4532	0.001807	-3.6041	-0.001886	-0.15085	-7.8939E-05	523.2876804271383	74.286	1.013	75.604	75.279	76.292	1.318					114	32	5	0	0	0	0.38289	1	31099	31099		57.471	9.1255	1	53402000			17246	7817	8199	8237	20239	20239	12				0.043266697426361134
LERCLLEL	8	Carbamidomethyl (C)	_LERC(Carbamidomethyl (C))LLEL_	LERC(1)LLEL		LERC(57)LLEL		0	1	0		nc|ENSG00000030066|Q12769-2|NUP160	nc|ENSG00000030066|Q12769-2|NUP160	nc|ENSG00000030066|Q12769-2|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2928954958916	2	523.289159	1044.56377	2.9498	0.0015436	-2.9592	-0.0015485	-0.0094587	-4.9496E-06	523.2879082324351	73.817	1.0536	75.613	75.317	76.371	1.7962					118	33	5	0	0	0	0.38289	1	30903	30903		57.471	6.6163	1	45703000			17247	7817	8199	8237	20240	20240	12				0.043266697426361134
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3564330935478	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.337	1	79.337	78.837	79.837	0								0	0	0	0.65975	1	33035	33035		4.897	0.70751	1				17248	2184	8200	8238	20241	20241					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3564330935478	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.89	1	79.89	79.39	80.39	0								0	0	0	0.65676	1	33266	33266		8.1555	2.4237	1				17249	2184	8200	8238	20242	20242					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3545410037041	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.303	1	80.303	79.803	80.803	0								0	0	0	0.65676	1	33439	33439		8.1555	2.4237	1				17250	2184	8200	8238	20243	20243					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3542968630791	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.296	1	81.296	80.796	81.796	0								0	0	0	0.6538	1	33853	33853		10.8	5.0677	1				17251	2184	8200	8238	20244	20244					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3558837771416	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.436	1	86.436	85.936	86.936	0								0	0	0	0.65951	1	36021	36021		5.2969	0.76802	1				17252	2184	8200	8238	20245	20245					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3546630740166	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.062	1	69.385	68.885	69.885	0.32224								0	0	0	0.65975	1	28908	28908		4.897	0.70751	1				17253	2184	8200	8238	20246	20246					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3543578982353	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.123	1	78.433	77.933	78.933	0.30933								0	0	0	0.65676	1	32664	32664		8.1555	2.4237	1				17254	2184	8200	8238	20247	20247					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3575927615166	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.197	1	79.497	78.997	79.997	0.30047								0	0	0	0.65926	1	33115	33115		5.7319	0	1				17255	2184	8200	8238	20248	20248					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3536254763603	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.285	1	80.576	80.076	81.076	0.29056								0	0	0	0.65926	1	33562	33562		5.7319	0.83484	1				17256	2184	8200	8238	20249	20249					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3538085818291	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.334	1	81.624	81.124	82.124	0.29056								0	0	0	0.65926	1	34002	34002		5.7319	0.83484	1				17257	2184	8200	8238	20250	20250					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3530151247978	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.646	1	81.926	81.426	82.426	0.2802								0	0	0	0.65676	1	34137	34137		8.1555	3.2585	1				17258	2184	8200	8238	20251	20251					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3530761599541	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.462	1	43.354	42.854	43.854	1.8927								0	0	0	0.65676	1	17378	17378		8.1555	1.0538	1				17259	2184	8200	8238	20252	20252					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3548461794853	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.584	1	43.477	42.977	43.977	1.8927								0	0	0	0.65676	1	17431	17431		8.1555	1.0538	1				17260	2184	8200	8238	20253	20253					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3535644412041	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.848	1	43.741	43.241	44.241	1.8927								0	0	0	0.65676	1	17537	17537		8.1555	0.54658	1				17261	2184	8200	8238	20254	20254					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3547241091728	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.237	1	44.159	43.659	44.659	1.9211								0	0	0	0.65676	1	17701	17701		8.1555	1.0538	1				17262	2184	8200	8238	20255	20255					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3556396365166	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.079	1	45	44.5	45.5	1.9211								0	0	0	0.65676	1	18059	18059		8.1555	1.0538	1				17263	2184	8200	8238	20256	20256					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3501464724541	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.34	1	45.284	44.784	45.784	1.9438								0	0	0	0.65676	1	18172	18172		8.1555	1.0538	1				17264	2184	8200	8238	20257	20257					0.018507857330178012
LERDERREER	10	Unmodified	_LERDERREER_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3566772341728	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.114	1	46.057	45.557	46.557	1.9438								0	0	0	0.65676	1	18493	18493		8.1555	2.4237	1				17265	2184	8200	8238	20258	20258					0.018507857330178012
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3545410037041	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.038	1	70.038	69.538	70.538	0								0	0	0	0.65926	1	29163	29163		5.7319	0	1				17266	3388	8201	8239	20259	20259					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3579589724541	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.553	1	79.553	79.053	80.053	0								0	0	0	0.65926	1	33125	33125		5.7319	0	1				17267	3388	8201	8239	20260	20260					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3531982302666	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.703	1	80.703	80.203	81.203	0								0	0	0	0.65926	1	33605	33605		5.7319	0	1				17268	3388	8201	8239	20261	20261					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3529540896416	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.986	1	80.986	80.486	81.486	0								0	0	0	0.65926	1	33723	33723		5.7319	0	1				17269	3388	8201	8239	20262	20262					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3542358279228	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.01	1	116.01	115.51	116.51	0								0	0	0	0.65975	1	50050	50050		4.897	0.70751	1				17270	3388	8201	8239	20263	20263					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3546630740166	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.936	1	69.259	68.759	69.759	0.32224								0	0	0	0.65926	1	28856	28856		5.7319	0	1				17271	3388	8201	8239	20264	20264					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3547241091728	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.182	1	69.504	69.004	70.004	0.32224								0	0	0	0.65926	1	28958	28958		5.7319	0	1				17272	3388	8201	8239	20265	20265					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3546020388603	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.381	1	69.703	69.203	70.203	0.32224								0	0	0	0.65926	1	29040	29040		5.7319	0	1				17273	3388	8201	8239	20266	20266					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3545410037041	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.75	1	70.072	69.572	70.572	0.32224								0	0	0	0.65676	1	29193	29193		8.1555	2.4237	1				17274	3388	8201	8239	20267	20267					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3533203005791	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.932	1	70.254	69.754	70.754	0.32224								0	0	0	0.65926	1	29268	29268		5.7319	0	1				17275	3388	8201	8239	20268	20268					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3549072146416	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.129	1	70.451	69.951	70.951	0.32224								0	0	0	0.65926	1	29350	29350		5.7319	0	1				17276	3388	8201	8239	20269	20269					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3529540896416	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.251	1	70.573	70.073	71.073	0.32224								0	0	0	0.65926	1	29404	29404		5.7319	0	1				17277	3388	8201	8239	20270	20270					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3531982302666	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.601	1	70.924	70.424	71.424	0.32294								0	0	0	0.65926	1	29555	29555		5.7319	0	1				17278	3388	8201	8239	20271	20271					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3545410037041	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.38	1	118.42	117.92	118.92	0.041039								0	0	0	0.65926	1	50853	50853		5.7319	0	1				17279	3388	8201	8239	20272	20272					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3538085818291	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.715	1	44.636	44.136	45.136	1.9211								0	0	0	0.65676	1	17900	17900		8.1555	0	1				17280	3388	8201	8239	20273	20273					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3552734255791	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.785	1	45.729	45.229	46.229	1.9438								0	0	0	0.65676	1	18359	18359		8.1555	2.4237	1				17281	3388	8201	8239	20274	20274					0.01130053132555986
LEREQLEWER	10	Unmodified	_LEREQLEWER_					0	0	0		nc|ENSG00000154380|Q8N8S7-3|ENAH;ENSG00000154380|ENST00000366843|ENAH;nc|ENSG00000154380|Q8N8S7|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	nc|ENSG00000154380|Q8N8S7-3|ENAH	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3582641482353	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.649	1	46.609	46.109	47.109	1.9596								0	0	0	0.65926	1	18713	18713		5.7319	0	1				17282	3388	8201	8239	20275	20275					0.01130053132555986
LEREVRMRRYR	11	Unmodified	_LEREVRMRRYR_					0	0	0		nc|ENSG00000178795|Q6W3E5|GDPD4;ENSG00000178795|ENST00000315938|GDPD4	nc|ENSG00000178795|Q6W3E5|GDPD4	nc|ENSG00000178795|Q6W3E5|GDPD4	MSMS	GG20161007_CRH_Patient100_W632_02	4	782.2011596560478	2	782.436075	1562.8576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.136	1	97.442	96.942	97.942	0.3062								0	0	0	0.63775	1	40860	40860		2.2828	0.95324	1				17283	7937	8202	8240	20276	20276					0.09868256565232514
LERIKRKARR	10	Unmodified	_LERIKRKARR_					0	0	0		tr|A0A553SIF1|A0A553SIF1_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_14740PE=4SV=1	tr|A0A553SIF1|A0A553SIF1_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_14740PE=4SV=1	tr|A0A553SIF1|A0A553SIF1_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_14740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	663.4352294802666	2	663.433661	1324.85277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.56	1	101.73	101.23	102.23	0.17032								0	0	0	0.66166	1	42735	42735		1.6526	0	1				17284	16192	8203	8241	20277	20277					0.2033374048476162
LERLFSYYGPQ	11	Unmodified	_LERLFSYYGPQ_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A;nc|ENSG00000196535|Q92614-5|MYO18A;nc|ENSG00000196535|Q92614-2|MYO18A;PHF12-MYO18A|2|fusion;PHF12-MYO18A|3|fusion	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MSMS	GG20161007_CRH_Patient100_W632_01	3	687.2916137576103	2	686.848427	1371.6823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.11	1	118.32	117.82	118.82	0.21096								0	0	0	0.63775	1	51063	51063		4.897	1.6157	1				17285	4945	8204	8242	20278	20278					0.011327402520009855
LERLIPVIRTN	11	Unmodified	_LERLIPVIRTN_					0	0	0			REV__nc|ENSG00000118690|Q8NEN0-2|ARMC2	REV__nc|ENSG00000118690|Q8NEN0-2|ARMC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7065917849541	4	331.708131	1322.80342	-1.7198	-0.00057047	-1.5916	-0.00052793	-3.3114	-0.0010984	331.7075433804945	44.888	0.87029	44.888	44.38	45.25	0					52	27	2	0	0	0	1.0254	3	18751	18700;18751;18868		2.2527	0.71267	1	4015700	+		17286	9524	8205	8243	20279;20280;20281	20280					0.15492987685320259
LERLIPVIRTN	11	Unmodified	_LERLIPVIRTN_					0	0	0			REV__nc|ENSG00000118690|Q8NEN0-2|ARMC2	REV__nc|ENSG00000118690|Q8NEN0-2|ARMC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7073547244072	4	331.708131	1322.80342	-1.6841	-0.00055862	-1.1106	-0.00036841	-2.7947	-0.00092703	331.7077939016305	45.636	0.79131	45.636	45.312	46.103	0					46	24	2	0	0	0	1.0032	2	19126	19126;19202		3.5927	2.3778	1	4433400	+		17287	9524	8205	8243	20282;20283	20282					0.15492987685320259
LERRKKRKTK	10	Unmodified	_LERRKKRKTK_					0	0	0			REV__ENSG00000153140|ENST00000283122|CETN3	REV__ENSG00000153140|ENST00000283122|CETN3	MSMS	GG20161007_CRH_Patient100_W632_02	4	671.9394409060478	2	671.941319	1341.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.24	1	102.44	101.94	102.94	0.19076								0	0	0	0.66166	1	42997	42997		1.6526	0.32309	1		+		17288	10445	8206	8244	20284	20284					0.21082607281960009
LERRQLLP	8	Unmodified	_LERRQLLP_					0	0	0			REV__ENSG00000188060.7,RAB42,chr1,+,I1.1,28592400,28592494|81|9.67|2|intron	REV__ENSG00000188060.7,RAB42,chr1,+,I1.1,28592400,28592494|81|9.67|2|intron	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2126647830009	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.82	1	19.799	19.299	20.299	0.97922								0	0	0	1.0178	1	7842	7842		1.6526	0	1		+		17289	11560	8207	8245	20285	20285					0.10804844325434715
LERRRILEV	9	Unmodified	_LERRRILEV_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;CCDC77|p.E418Q|1|0.13|ENSG00000120647|chr12:440928-440928|G/C|missense_variant	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3697387576103	2	592.367121	1182.71969	1.8311	0.0010847	2.2022	0.0013045	4.0333	0.0023892	592.3682995659144	66.933	0.34581	68.322	68.121	68.467	1.3888					22	10	3	0	0	0	0.026836	1	28098	28098		92.491	3.0907	1	2842000			17290	2112	8208	8246	20286	20286					0.13563876308285217
LERRRILEV	9	Unmodified	_LERRRILEV_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;CCDC77|p.E418Q|1|0.13|ENSG00000120647|chr12:440928-440928|G/C|missense_variant	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3687011599541	2	592.367121	1182.71969	1.6702	0.00098935	2.0169	0.0011947	3.6871	0.0021841	592.3676644744118	66.454	0.37794	68.343	68.119	68.497	1.8889					24	11	3	0	0	0	0.007852	2	27848	27848;27906		111.29	9.1687	1	2159000			17291	2112	8208	8246	20287;20288	20287					0.13563876308285217
LERRRILEV	9	Unmodified	_LERRRILEV_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;CCDC77|p.E418Q|1|0.13|ENSG00000120647|chr12:440928-440928|G/C|missense_variant	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	592.367121	1182.71969	1.8593	0.0011014	1.5229	0.00090212	3.3822	0.0020035	592.3677939678728	68.708	0.28107	68.708	68.549	68.83	0	0.24775	-0.00076442	NaN	111.29	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	737690			17292	2112	8208	8246							0.13563876308285217
LERRRKRRHQK	11	Unmodified	_LERRRKRRHQK_					0	0	0		ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.4957763552666	4	391.494825	1561.95019	0.11538	4.5172E-05	1.0164	0.00039792	1.1318	0.00044309	391.4956720521357	45.266	1.2964	45.266	44.964	46.261	0					187	40	7	0	0	0	1.0402	2	18890	18890;19045		0.094841	0.094841	1	203700000			17293	5552	8209	8247	20289;20290	20289					0.19169522413631057
LERRRKRRHQK	11	Unmodified	_LERRRKRRHQK_					0	0	0		ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.4953491091728	4	391.494825	1561.95019	1.7891	0.00070042	-0.46411	-0.00018169	1.325	0.00051873	391.4947586822703	44.141	1.7302	44.467	43.963	45.693	0.32664					236	57	5	0	0	0	1.0402	1	18520	18520		0.094841	0.011491	1	141910000			17294	5552	8209	8247	20291	20291					0.19169522413631057
LERRRKRRHQK	11	Unmodified	_LERRRKRRHQK_					0	0	0		ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	ENST00000233379.8_1_2:96079888-96080107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.4952575564384	4	391.494825	1561.95019	1.5226	0.00059611	-1.0822	-0.00042366	0.44047	0.00017244	391.49452146757574	42.232	1.7709	44.153	43.633	45.404	1.9211					232	57	5	0	0	0	1.0402	1	17724	17724		0.094841	0.094841	1	154800000			17295	5552	8209	8247	20292	20292					0.19169522413631057
LERSLRRRRWF	11	Unmodified	_LERSLRRRRWF_					0	0	0		ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENST00000533297.1_1_11:111896132-111933256:+|nuORF	ENST00000533297.1_1_11:111896132-111933256:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.3866454958916	3	525.642809	1573.9066	4.7872	0.0025164	2.8934	0.0015209	7.6806	0.0040372	525.9786215611338	90.047	0.15618	91.067	90.958	91.115	1.0199					5	4	2	0	0	0	0.14606	1	37908	37908		1.3296	1.2348	1	154980			17296	7185	8210	8248	20293	20293					0.1425991291646369
LERTHYIPDM	10	Unmodified	_LERTHYIPDM_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	638.3144409060478	2	637.81353	1273.61251	2.0483	0.0013064	-3.2404	-0.0020668	-1.1921	-0.00076035	637.8113471631638	79.264	1.3207	79.264	78.597	79.918	0					101	42	4	0	0	0	0.89803	1	32997	32997		1.6526	0.17072	1	1102000	+		17297	10695	8211	8249	20294	20294					-0.013354616882907067
LESATRVGR	9	Unmodified	_LESATRVGR_					0	0	0			REV__ENST00000339381.5_1_1:1268919-1269807:+|nuORF	REV__ENST00000339381.5_1_1:1268919-1269807:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7818786501884	2	494.780348	987.546142	3.3635	0.0016642	-3.5563	-0.0017596	-0.19277	-9.538E-05	494.7789663485833	74.346	0.54856	75.664	75.31	75.859	1.318					49	17	4	0	0	0	0.1735	1	31118	31118		36.044	1.8569	1	8165900	+		17298	12487	8212	8250	20295	20295					0.05187090532012917
LESFDKFVK	9	Unmodified	_LESFDKFVK_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8062621951103	2	556.802957	1111.59136	0.87747	0.00048858	3.5895	0.0019986	4.467	0.0024872	556.8047271870238	38.04	0.36672	39.86	39.701	40.068	1.8202					23	11	3	0	0	0	0.63129	1	16009	16009		10.074	0.6908	1	2172900	+		17299	8993	8213	8251	20296	20296					0.040028962745282115
LESFLLKIS	9	Unmodified	_LESFLLKIS_					0	0	0		ENST00000389934.7_2_17:56693632-56699050:-|nuORF;ENST00000240361.12_2_17:56693632-56699050:-|nuORF	ENST00000389934.7_2_17:56693632-56699050:-|nuORF	ENST00000389934.7_2_17:56693632-56699050:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3169433474541	2	525.3157	1048.61685	2.083	0.0010942	0.41198	0.00021642	2.495	0.0013106	525.3155303499157	64.184	0.61283	64.513	64.305	64.918	0.32899					36	18	3	0	0	0	0.53525	1	26948	26948		13.906	3.0821	1	3557700			17300	5566	8214	8252	20297	20297					0.09448370796940253
LESGIQGAHC	10	Unmodified	_LESGIQGAHC_					0	0	0		Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1014.468676745892	1	1014.46731	1013.46003	2.5963	0.0026339	2.2313	0.0022636	4.8277	0.0048975	1014.4670960014049	69.985	0.25929	71.823	71.687	71.946	1.8378					10	7	2	0	0	0	0.6819	1	29389	29389		19.257	2.3147	1	952800			17301	17360	8215	8253	20298	20298					-0.0461623736501906
LESGIQGAHC	10	Unmodified	_LESGIQGAHC_					0	0	0		Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	Zaphod3_dup92|chr1:206070636-206070794:-|1.9809183537487975|0.0321640894937811|5.94|422.0|5|3|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1014.46731	1013.46003	2.4572	0.0024928	0.37434	0.00037975	2.8316	0.0028725	1014.4666620468355	70.471	0.25756	71.824	71.712	71.97	1.3536	0.00062536	-0.00068625	NaN	19.257	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308100			17302	17360	8215	8253							-0.0461623736501906
LESGVDISLWD	11	Unmodified	_LESGVDISLWD_					0	0	0		tr|A0A553SRE7|A0A553SRE7_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_00775PE=4SV=1	tr|A0A553SRE7|A0A553SRE7_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_00775PE=4SV=1	tr|A0A553SRE7|A0A553SRE7_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_00775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3037597537041	2	617.303518	1232.59248	0.5218	0.00032211	0.77174	0.0004764	1.2935	0.00079851	617.3035972443107	37.222	0.26966	39.043	38.876	39.145	1.8202					19	11	2	0	0	0	0.37492	1	15591	15591		27.629	1.3607	1	1254100			17303	16552	8216	8254	20299	20299					-0.014509341472376036
LESIIQLSI	9	Unmodified	_LESIIQLSI_					0	0	0		tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.3082763552666	2	508.305332	1014.59611	2.8694	0.0014585	2.6065	0.0013249	5.4759	0.0027834	508.306768361058	89.408	0.28845	89.631	89.519	89.807	0.22359					13	8	2	0	0	0	0.34572	1	37512	37512		23.148	0	1	846930			17304	16605	8217	8255	20300	20300					0.08939780417290422
LESIIQLSI	9	Unmodified	_LESIIQLSI_					0	0	0		tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	tr|A0A553SSD2|A0A553SSD2_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3080627322197	2	508.305332	1014.59611	4.8218	0.002451	1.3759	0.0006994	6.1977	0.0031503	508.306360555174	88.404	0.31695	89.85	89.636	89.953	1.4467					17	9	2	0	0	0	0.1735	1	37266	37266		36.044	0	1	870940			17305	16605	8217	8255	20301	20301					0.08939780417290422
LESIISGAAL	10	Unmodified	_LESIISGAAL_					0	0	0		CTNNA1-KDM3B|1|fusion;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;ENSG00000066032|ENST00000402739|CTNNA2;ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1	CTNNA1-KDM3B|1|fusion;ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2826110720634	2	487.281857	972.549162	1.7347	0.0008453	0.50568	0.00024641	2.2404	0.0010917	487.28207250451453	42.366	0.4395	42.366	42.165	42.604	0					28	13	3	0	0	0	0.5476	1	17713	17713		25.399	0	1	1732500			17306	383;670	8218	8256	20302	20302					0.06178920866148019
LESIISGAAL	10	Unmodified	_LESIISGAAL_					0	0	0		CTNNA1-KDM3B|1|fusion;ENST00000522730.1_1_5:138160461-138163428:+|nuORF;nc|ENSG00000066032|P26232-3|CTNNA2;nc|ENSG00000066032|P26232-2|CTNNA2;nc|ENSG00000066032|P26232-5|CTNNA2;ENSG00000066032|ENST00000402739|CTNNA2;ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1	CTNNA1-KDM3B|1|fusion;ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2823058962822	2	487.281857	972.549162	1.8362	0.00089474	-0.088019	-4.289E-05	1.7482	0.00085185	487.2817408132448	39.89	0.49741	41.752	41.521	42.019	1.8624					52	15	5	0	0	0	0.068389	1	16728	16728		71.134	3.0529	1	11494000			17307	383;670	8218	8256	20303	20303					0.06178920866148019
LESRRRRRGP	10	Unmodified	_LESRRRRRGP_					0	0	0			REV__ENST00000577830.5_2_17:55962997-55963066:-|nuORF	REV__ENST00000577830.5_2_17:55962997-55963066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8854247927666	2	641.881793	1281.74903	2.0424	0.001311	1.3754	0.00088287	3.4178	0.0021938	641.8826590024304	79.226	1.0114	79.226	78.907	79.918	0					92	32	3	0	0	0	0.89803	1	33267	33267		1.4819	0.28856	1	2934400	+		17308	13990	8219	8257	20304	20304					0.11942833377111128
LESTESRSSF	10	Unmodified	_LESTESRSSF_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-4|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.7716552615166	2	571.769842	1141.52513	4.1589	0.0023779	-0.0032628	-1.8656E-06	4.1556	0.002376	571.7696277490937	91.794	0.43069	92.73	92.588	93.019	0.93624					32	13	3	0	0	0	0.32206	1	38669	38669		37.974	1.9298	1	1148400			17309	3576	8220	8258	20305	20305					-0.03996964358157129
LESTESRSSF	10	Unmodified	_LESTESRSSF_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-4|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	571.769842	1141.52513	3.3636	0.0019232	0.19827	0.00011337	3.5619	0.0020366	571.7694813145257	91.359	0.42755	92.725	92.535	92.963	1.366	-0.0024178	0.00011511	NaN	37.974	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1740200			17310	3576	8220	8258							-0.03996964358157129
LETALPSWV	9	Unmodified	_LETALPSWV_					0	0	0		ENST00000253251.12_1_1:10093392-10093464:+|nuORF	ENST00000253251.12_1_1:10093392-10093464:+|nuORF	ENST00000253251.12_1_1:10093392-10093464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2816345095634	2	508.276575	1014.5386	2.1486	0.0010921	3.311	0.0016829	5.4596	0.002775	508.27772723715555	83.607	0.3747	84.795	84.516	84.89	1.1879					24	11	3	0	0	0	0.37357	1	35027	35027		21.747	4.8044	1	3762900			17311	5590	8221	8259	20306	20306					0.03190938211719185
LETATKLKS	9	Unmodified	_LETATKLKS_					0	0	0			REV__chr14:94110756-94111659|258|29.59|0.35|6.4|+|0|None,IFI27|1	REV__chr14:94110756-94111659|258|29.59|0.35|6.4|+|0|None,IFI27|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7961913943291	2	495.795132	989.575711	1.2663	0.00062781	1.2488	0.00061917	2.5151	0.001247	495.79580889235757	69.336	0.43772	69.336	69.109	69.547	0					31	13	3	0	0	0	0.34572	1	28906	28906		23.148	1.4018	1	3847000	+		17312	8262	8222	8260	20307	20307					0.08050609757469829
LETKKKKKRRR	11	Unmodified	_LETKKKKKRRR_					0	0	0		ENST00000321870.2_1_8:65492938-65493277:+|nuORF	ENST00000321870.2_1_8:65492938-65493277:+|nuORF	ENST00000321870.2_1_8:65492938-65493277:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	735.9854003787041	2	735.988801	1469.96305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.539	1	60.867	60.367	61.367	0.32809								0	0	0	0.63775	1	25367	25367		2.9952	2.6882	1				17313	5848	8223	8261	20308	20308					0.2468654075314589
LETKQCMLI	9	Unmodified	_LETKQCMLI_					0	0	0			REV__ENSG00000261649|ENST00000567390|GOLGA6L7	REV__ENSG00000261649|ENST00000567390|GOLGA6L7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7843505740166	2	539.785395	1077.55624	1.4375	0.00077593	-2.9302	-0.0015817	-1.4927	-0.00080574	539.7834477530818	77.63	0.89089	79.381	79.041	79.932	1.7514					90	28	5	0	0	0	0.54523	1	32673	32673		13.508	0	1	11449000	+		17314	11987	8224	8262	20309	20309					0.020561941507139636
LETLPLIKK	9	Unmodified	_LETLPLIKK_					0	0	0			REV__tr|A0A553SI84|A0A553SI84_NIACIATPsynthasegammachainOS=NialliacirculansOX=1397GN=atpGPE=3SV=1	REV__tr|A0A553SI84|A0A553SI84_NIACIATPsynthasegammachainOS=NialliacirculansOX=1397GN=atpGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	352.2361022830009	3	352.23387	1053.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.933	1	100.01	99.506	100.51	0.072716								0	0	0	0.42693	1	41844	41844		0.26902	0	1		+		17315	14841	8225	8263	20310	20310					0.1550893658500172
LETMILSKL	9	Unmodified	_LETMILSKL_					0	0	0		L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|45|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|45|1|sense	L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|45|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3149902224541	2	524.309561	1046.60457	1.887	0.00098937	0.4592	0.00024076	2.3462	0.0012301	524.3095445425033	48.812	0.40184	50.789	50.576	50.978	1.9772					43	12	4	0	0	0	0.28372	2	20414	20414;20458		26.268	26.268	1	11616000			17316	7769	8226	8264	20311;20312	20311					0.08313011062250553
LETQEPRGL	9	Unmodified	_LETQEPRGL_					0	0	0		ENSG00000058453|ENST00000375541|CROCC;CROCC|p.Q1162Hfs*65|1|0.07|ENSG00000058453|chr1:16955332-16955332|G/-|frameshift_variant	ENSG00000058453|ENST00000375541|CROCC	ENSG00000058453|ENST00000375541|CROCC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	522.3268310427666	2	521.780013	1041.54547	2.0802	0.0010854	0.87753	0.00045788	2.9577	0.0015433	521.7801909109594	76.029	0.40691	76.029	75.82	76.226	0					35	12	4	0	0	0	0.11645	1	31578	31578		4.756	0	1	5893500			17317	736	8227	8265	20313	20313					0.026362510922808724
LETWRKFILLI	11	Unmodified	_LETWRKFILLI_					0	0	0			REV__ENST00000396049.4_1_2:74382388-74382565:-|nuORF	REV__ENST00000396049.4_1_2:74382388-74382565:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	716.5341674685478	2	716.439755	1430.86496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.706	1	98.953	98.453	99.453	0.24761								0	0	0	0.63775	1	41541	41541		5.2969	3.9674	1		+		17318	12842	8228	8266	20314	20314					0.16675919384601912
LEVCQSWNRPR	11	Unmodified	_LEVCQSWNRPR_					0	0	0			REV__nc|ENSG00000033178|A0AVT1-2|UBA6	REV__nc|ENSG00000033178|A0AVT1-2|UBA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3553954958916	2	694.348603	1386.68265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.218	1	70.218	69.718	70.718	0								0	0	0	0.63774	1	29239	29239		7.609	1.8771	1		+		17319	8580	8229	8267	20315	20315					0.004778367002018058
LEVCQSWNRPR	11	Unmodified	_LEVCQSWNRPR_					0	0	0			REV__nc|ENSG00000033178|A0AVT1-2|UBA6	REV__nc|ENSG00000033178|A0AVT1-2|UBA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3531371951103	2	694.348603	1386.68265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.504	1	70.504	70.004	71.004	0								0	0	0	0.63774	1	29364	29364		7.609	1.8771	1		+		17320	8580	8229	8267	20316	20316					0.004778367002018058
LEVEHPAA	8	Unmodified	_LEVEHPAA_					0	0	0		ENSG00000120438|ENST00000321394|TCP1;ENST00000543532.5_1_6:160205081-160210626:-|nuORF;ENST00000544255.5_1_6:160205081-160210586:-|nuORF;ENST00000538128.5_2_6:160206507-160210586:-|nuORF;ENST00000412860.1_1_7:42834686-42835559:+|nuORF	ENSG00000120438|ENST00000321394|TCP1	ENSG00000120438|ENST00000321394|TCP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	432.8845703005791	2	433.224342	864.434132	0.45145	0.00019558	-0.066694	-2.8894E-05	0.38476	0.00016669	433.22425552948806	16.221	0.39733	17.048	16.956	17.354	0.82643					33	20	2	0	0	0	2.3239	1	6744	6744		5.7604	2.8712	1	1676400			17321	2103	8230	8268	20317	20317					-0.0035076354499778972
LEVFKKHLKKI	11	Unmodified	_LEVFKKHLKKI_					0	0	0		tr|A0A7D6VPX7|A0A7D6VPX7_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18570PE=4SV=1	tr|A0A7D6VPX7|A0A7D6VPX7_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18570PE=4SV=1	tr|A0A7D6VPX7|A0A7D6VPX7_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18570PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	692.0506469607353	2	691.947747	1381.88094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.35	1	100.55	100.05	101.05	0.20527								0	0	0	0.63775	1	42197	42197		1.3295	0	1				17322	16777	8231	8269	20318	20318					0.2052762562150292
LEVFVLLFI	9	Unmodified	_LEVFVLLFI_					0	0	0		chr1:154219937-154221200|123|14.94|0.17|6.45|-|0|C1orf43,None|1	chr1:154219937-154221200|123|14.94|0.17|6.45|-|0|C1orf43,None|1	chr1:154219937-154221200|123|14.94|0.17|6.45|-|0|C1orf43,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8426391482353	2	546.838811	1091.66307	2.8571	0.0015624	0.72966	0.00039901	3.5868	0.0019614	546.838977205463	85	0.57192	86.596	86.25	86.822	1.5962					64	21	4	0	0	0	0.82604	1	35594	35594		2.3027	0	1	85050000			17323	159	8232	8270	20319	20319					0.12090435699042246
LEVKPHGKN	9	Unmodified	_LEVKPHGKN_					0	0	0		ENST00000262244.5_1_9:27455690-27529571:-|nuORF	ENST00000262244.5_1_9:27455690-27529571:-|nuORF	ENST00000262244.5_1_9:27455690-27529571:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1962158083916	3	341.197819	1020.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.747	1	93.747	93.247	94.247	0								0	0	0	0.42693	1	39179	39179		0.86438	0.087843	1				17324	5633	8233	8271	20320	20320					0.062165650544329765
LEVKVVPK	8	Unmodified	_LEVKVVPK_					0	0	0		SEMA4D|p.V643I|1|0.16|ENSG00000187764|chr9:89379366-89379366|C/T|missense_variant;ENSG00000187764|ENST00000422704|SEMA4D	SEMA4D|p.V643I|1|0.16|ENSG00000187764|chr9:89379366-89379366|C/T|missense_variant	SEMA4D|p.V643I|1|0.16|ENSG00000187764|chr9:89379366-89379366|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5360595583916	3	304.535661	910.585153	-0.42216	-0.00012856	1.9684	0.00059944	1.5462	0.00047088	304.53621423411187	16.191	0.52188	17.23	17.062	17.584	1.0392					63	18	4	0	0	0	0.8873	1	6724	6724		2.9952	0	1	20601000			17325	4836	8234	8272	20321	20321					0.1262842283366581
LEVMLPGFVF	10	Unmodified	_LEVMLPGFVF_					0	0	0		ENST00000264156.2_1_2:136598265-136598331:-|nuORF	ENST00000264156.2_1_2:136598265-136598331:-|nuORF	ENST00000264156.2_1_2:136598265-136598331:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3134643435478	2	576.312103	1150.60965	0.50543	0.00029129	0.7133	0.00041108	1.2187	0.00070237	576.3124568732056	20.628	0.50461	20.838	20.63	21.135	0.21024					32	15	3	0	0	0	0.89646	1	8637	8637		1.8442	0	1	966280			17326	5648	8235	8273	20322	20322					0.04037314924903512
LEVRLLYEI	9	Unmodified	_LEVRLLYEI_					0	0	0		nc|ENSG00000164506|Q5T5C0-3|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;ENSG00000164506|ENST00000321680|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3427612185478	2	574.339707	1146.66486	5.8626	0.0033671	-0.87113	-0.00050032	4.9915	0.0028668	574.3394843382397	88.78	0.45249	89.836	89.626	90.079	1.0562					26	13	3	0	0	0	0.48482	1	37432	37432		16.149	0.90062	1	1871800			17327	3781	8236	8274	20323	20323					0.09739444717001788
LEVRNLRGIPL	11	Unmodified	_LEVRNLRGIPL_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7016174197197	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	0.98155	2	17703	17703;17742		2.2527	1.0379	1	296590000			17328	4746	8237	8275	20324;20325	20324					0.1489671851386447
LEVVDGVVI	9	Unmodified	_LEVVDGVVI_					0	0	0			REV__tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	REV__tr|A0A7D6VQI6|A0A7D6VQI6_9CLOTuroporphyrinogen-IIIC-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7802917361259	2	471.778951	941.543348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.71	1	63.128	62.628	63.628	1.4177								0	0	0	0.317	1	25881	25881		16.942	0	1		+		17329	15385	8238	8276	20326	20326					0.070238223544834
LEVVTIHRL	9	Unmodified	_LEVVTIHRL_					0	0	0			REV__nc|ENSG00000101955|P78539-3|SRPX	REV__nc|ENSG00000101955|P78539-3|SRPX	MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3314697146416	2	540.332216	1078.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.538	1	85.697	85.197	86.197	1.159								0	0	0	0.42693	1	35472	35472		4.756	0	1		+		17330	9050	8239	8277	20327	20327					0.11369997639667417
LEWAKLVRRMI	11	Unmodified	_LEWAKLVRRMI_					0	0	0			REV__tr|A0A553SHU0|A0A553SHU0_NIACIacetate--CoAligaseOS=NialliacirculansOX=1397GN=acsAPE=4SV=1	REV__tr|A0A553SHU0|A0A553SHU0_NIACIacetate--CoAligaseOS=NialliacirculansOX=1397GN=acsAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9240600466728	2	707.921206	1413.82786	2.5402	0.0017982	0.034818	2.4648E-05	2.575	0.0018229	707.9210324951113	87.079	1.3768	87.322	87.17	88.547	0.24387					87	46	3	0	0	0	1.0388	1	36948	36948		0.35063	0	1	5000800	+		17331	14817	8240	8278	20328	20328					0.13749924567196103
LEWEMAVREK	10	Unmodified	_LEWEMAVREK_					0	0	0		SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2;SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant;SPTBN2|p.R1805Qfs*108|1|0.25|ENSG00000173898|chr11:66691414-66691435|TGGCGTGCCCCGTGCAGGAAGC/-|frameshift_variant;SPTBN2|p.A1813Pfs*107|1|0.29|ENSG00000173898|chr11:66691412-66691412|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.703	1	12.397	11.897	12.897	0.69396								0	0	0	0.66151	1	4861	4861		1.9064	0	1				17332	4305	8241	8279	20329	20329					0.010571113458127002
LEWLWSEPWVW	11	Unmodified	_LEWLWSEPWVW_					0	0	0			REV__ENST00000486274.5_1_3:99980056-99980248:+|nuORF	REV__ENST00000486274.5_1_3:99980056-99980248:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	765.8449584841728	2	765.874445	1529.73434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.835	1	97.142	96.642	97.642	0.3062								0	0	0	0.63775	1	40733	40733		5.7319	0.83484	1		+		17333	13394	8242	8280	20330	20330					-0.009340963342310715
LEWSRRKRKRL	11	Unmodified	_LEWSRRKRKRL_					0	0	0		ENST00000394164.5_1_14:73603593-73603752:+|nuORF	ENST00000394164.5_1_14:73603593-73603752:+|nuORF	ENST00000394164.5_1_14:73603593-73603752:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	764.1112548708916	2	764.470775	1526.927	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.968	1	98.224	97.724	98.724	0.25636								0	0	0	0.63775	1	41217	41217		1.3295	1.0225	1				17334	6278	8243	8281	20331	20331					0.18461083576289639
LEYEWDLVD	9	Unmodified	_LEYEWDLVD_					0	0	0		ENSG00000171714|ENST00000324559|ANO5	ENSG00000171714|ENST00000324559|ANO5	ENSG00000171714|ENST00000324559|ANO5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	591.2713500857353	2	591.271687	1180.52882	0.079164	4.6808E-05	0.22673	0.00013406	0.30589	0.00018087	591.2719042391849	12.667	0.18622	12.756	12.648	12.834	0.089381					15	5	4	0	0	0	0.37357	1	5253	5253		21.747	2.4897	1	3174000			17335	4203	8244	8282	20332	20332					-0.05422294584332121
LEYLRQAL	8	Unmodified	_LEYLRQAL_					0	0	0			REV__tr|A0A553SME4|A0A553SME4_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22415PE=3SV=1	REV__tr|A0A553SME4|A0A553SME4_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_22415PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2936889529228	2	503.290017	1004.56548	3.5163	0.0017697	3.6163	0.0018201	7.1326	0.0035898	503.29197419984837	74.322	0.45332	75.64	75.405	75.859	1.318					30	14	3	0	0	0	0.87803	1	31152	31152		10.183	0	1	3519000	+		17336	15015	8245	8283	20333	20333					0.06338046822895649
LEYSSDKRF	9	Unmodified	_LEYSSDKRF_					0	0	0			REV__ENSG00000103522|ENST00000337929|IL21R	REV__ENSG00000103522|ENST00000337929|IL21R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	572.3257934451103	2	572.785296	1143.55604	2.2661	0.001298	-3.5726	-0.0020464	-1.3065	-0.00074836	572.7835263391522	84.217	0.38986	85.814	85.643	86.033	1.5962					22	12	2	0	0	0	0.11463	1	35327	35327		7.9102	2.6133	1	3060000	+		17337	9110	8246	8284	20334	20334					-0.009997662532896356
LEYVILIG	8	Unmodified	_LEYVILIG_					0	0	0			REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	307.1891357302666	3	307.18815	918.54262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.91	1	105.07	104.57	105.57	0.15859								0	0	0	1.0178	1	44571	44571		0.45834	0	1		+		17338	12889	8247	8285	20335	20335					0.08009027705440985
LEYVILIG	8	Unmodified	_LEYVILIG_					0	0	0			REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	REV__ENST00000402426.2_1_6:73765044-73765512:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1889526247978	3	307.18815	918.54262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.86	1	105.03	104.53	105.53	0.16679								0	0	0	1.0178	1	44476	44476		0.45834	0	1		+		17339	12889	8247	8285	20336	20336					0.08009027705440985
LFAALRRQRK	10	Unmodified	_LFAALRRQRK_					0	0	0		ENSG00000113361|ENST00000265071|CDH6	ENSG00000113361|ENST00000265071|CDH6	ENSG00000113361|ENST00000265071|CDH6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	630.3957397341728	2	629.89638	1257.77821	2.6544	0.001672	-1.0987	-0.00069208	1.5557	0.00097991	629.8966854883923	107.36	0.23018	107.41	107.29	107.52	0.052452					20	10	3	0	0	0	0.89803	1	45887	45887		0.45834	0.057624	1	22976000			17340	1819	8248	8286	20337	20337					0.15962977673393652
LFAEPWLF	8	Unmodified	_LFAEPWLF_					0	0	0			REV__nc|ENSG00000136986|Q9BUN8-2|DERL1	REV__nc|ENSG00000136986|Q9BUN8-2|DERL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7723266482353	2	511.770929	1021.5273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.533	1	91.899	91.399	92.399	1.366								0	0	0	1.0178	1	38130	38130		22.453	4.3177	1		+		17341	10006	8249	8287	20338	20338					0.017401609082412506
LFAFILFS	8	Unmodified	_LFAFILFS_					0	0	0			REV__ENST00000461916.5_1_2:95753104-95767538:-|nuORF	REV__ENST00000461916.5_1_2:95753104-95767538:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2784606814384	2	479.275847	956.537141	2.8631	0.0013722	2.8944	0.0013872	5.7575	0.0027594	479.2771873470125	79.446	0.43869	80.697	80.424	80.863	1.2512					33	13	3	0	0	0	0.89176	1	33347	33347		0.79363	0	1	3845800	+		17342	13203	8250	8288	20339	20339					0.057133489136276694
LFAGFENFLL	10	Unmodified	_LFAGFENFLL_					0	0	0		ENSG00000188269|ENST00000322301|OR7A5	ENSG00000188269|ENST00000322301|OR7A5	ENSG00000188269|ENST00000322301|OR7A5	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.8156005740166	2	585.813325	1169.6121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.959	1	74.769	74.269	75.269	1.8101								0	0	0	0.49467	1	30607	30607		25.399	0	1				17343	4856	8251	8289	20340	20340					0.03407486654191416
LFAGPDKDKLL	11	Unmodified	_LFAGPDKDKLL_					0	0	0			REV__ENST00000552168.1_1_12:53455573-53455786:+|nuORF	REV__ENST00000552168.1_1_12:53455573-53455786:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.7867309451103	2	608.850438	1215.68632	2.7256	0.0016595	-1.5518	-0.0009448	1.1739	0.00071471	608.8515887532235	75.906	0.29784	77.673	77.391	77.689	1.7672					13	9	2	0	0	0	0.14606	1	31728	31728		6.7232	6.1217	1	789240	+		17344	9314	8252	8290	20341	20341					0.08710829745723458
LFAGPDKDKLL	11	Unmodified	_LFAGPDKDKLL_					0	0	0			REV__ENST00000552168.1_1_12:53455573-53455786:+|nuORF	REV__ENST00000552168.1_1_12:53455573-53455786:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	608.850438	1215.68632	1.9345	0.0011778	-2.6488	-0.0016128	-0.71435	-0.00043493	608.8504260595827	77.126	0.34417	77.443	77.387	77.732	0.31654	-0.1152	-0.00042064	NaN	1.4819	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	775150	+		17345	9314	8252	8290							0.08710829745723458
LFAKLKKIL	9	Unmodified	_LFAKLKKIL_					0	0	0		CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant;CASP8AP2|p.V1684Efs*3|1|0.22|ENSG00000118412|chr6:89868341-89868341|T/-|frameshift_variant;ENSG00000118412|ENST00000551025|CASP8AP2;ENST00000237177.10_1_6:90556308-90583533:+|nuORF;nc|ENSG00000118412|Q9UKL3|CASP8AP2	CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3776733279228	2	537.375895	1072.73724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.71	1	106.87	106.37	107.37	0.15781								0	0	0	0.42693	1	45758	45758		0	0	1				17346	120	8253	8291	20342	20342					0.20377823581247867
LFALGPLV	8	Unmodified	_LFALGPLV_					0	0	0		ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2639343142509	2	415.262739	828.510926	1.294	0.00053734	-0.10749	-4.4636E-05	1.1865	0.00049271	415.26254243666665	89.211	0.82554	89.211	88.732	89.558	0					49	25	3	0	0	0	0.88958	1	37341	37341		2.8892	0	1	3517000			17347	3800	8254	8292	20343	20343					0.08981079742125075
LFALGPLV	8	Unmodified	_LFALGPLV_					0	0	0		ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	415.262739	828.510926	4.9436	0.0020529	-1.5881	-0.00065946	3.3556	0.0013934	415.2619421888041	87.922	0.57162	88.978	88.669	89.24	1.0562	-0.17731	-0.00047968	NaN	2.8892	36	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2867400			17348	3800	8254	8292							0.08981079742125075
LFAMMEKM	8	Unmodified	_LFAMMEKM_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7377502322197	2	500.73686	999.459166	2.4896	0.0012466	1.3026	0.00065227	3.7922	0.0018989	501.23951384433815	64.41	0.22807	64.739	64.626	64.854	0.32899					9	6	2	0	0	0	0.88587	1	26978	26978		5.2307	0.47466	1	605910	+		17349	11826	8255	8293	20344	20344					-0.040584913299312575
LFAPGLLFQ	9	Unmodified	_LFAPGLLFQ_					0	0	0			REV__nc|ENSG00000257335|O43451-1|MGAM	REV__nc|ENSG00000257335|O43451-1|MGAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7911254763603	2	503.292028	1004.5695	1.8031	0.00090747	1.4841	0.00074695	3.2872	0.0016544	503.29361784486184	80.653	0.51907	82.349	82.091	82.61	1.6959					47	16	4	0	0	0	0.64949	1	33792	33792		9.3474	0	1	8973500	+		17350	11976	8256	8294	20345	20345					0.0674013631660273
LFASFLPG	8	Unmodified	_LFASFLPG_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	851.4720336794853	1	851.466167	850.45889	1.707	0.0014534	4.2409	0.003611	5.9479	0.0050644	851.4689809198429	71.51	0.25387	73.334	73.191	73.445	1.824					11	7	2	0	0	0	0.76629	1	29997	29997		24.21	1.7573	1	1135900			17351	1345	8257	8295	20346	20346					0.027679163283892194
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1850768923759	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.39	1	104.39	103.89	104.89	0								0	0	0	0.42693	1	44037	44037		1.0715	0.67075	1		+		17352	11334	8258	8296	20347	20347					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1864196658134	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.038	1	75.356	74.856	75.856	1.318								0	0	0	0.42693	1	31068	31068		1.1933	0.12188	1		+		17353	11334	8258	8296	20348	20348					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1867553591728	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.144	1	75.462	74.962	75.962	1.318								0	0	0	0.42693	1	31112	31112		1.1933	0.12188	1		+		17354	11334	8258	8296	20349	20349					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1866638064384	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.263	1	75.581	75.081	76.081	1.318								0	0	0	0.42693	1	31162	31162		1.1933	0.735	1		+		17355	11334	8258	8296	20350	20350					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1865722537041	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.382	1	75.7	75.2	76.2	1.318								0	0	0	0.42693	1	31214	31214		1.1933	0.12188	1		+		17356	11334	8258	8296	20351	20351					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1866943240166	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.498	1	75.816	75.316	76.316	1.318								0	0	0	0.42693	1	31265	31265		1.1933	0.12188	1		+		17357	11334	8258	8296	20352	20352					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1865417361259	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.59	1	75.896	75.396	76.396	1.3063								0	0	0	0.42693	1	31306	31306		1.1933	0.735	1		+		17358	11334	8258	8296	20353	20353					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1876708865166	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.459	1	77.753	77.253	78.253	1.2938								0	0	0	0.42693	1	32099	32099		1.0715	0	1		+		17359	11334	8258	8296	20354	20354					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1864196658134	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.576	1	74.386	73.886	74.886	1.8101								0	0	0	0.42693	1	30450	30450		1.1933	0.735	1		+		17360	11334	8258	8296	20355	20355					0.03914357931569157
LFATPHTLT	9	Unmodified	_LFATPHTLT_					0	0	0			REV__ENSG00000181963|ENST00000325719|OR52K2	REV__ENSG00000181963|ENST00000325719|OR52K2	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1861755251884	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.514	1	80.249	79.749	80.749	1.735								0	0	0	0.42693	1	32929	32929		1.1933	0.12188	1		+		17361	11334	8258	8296	20356	20356					0.03914357931569157
LFAVFQTTF	9	Unmodified	_LFAVFQTTF_					0	0	0		nc|ENSG00000145623|Q99650-2|OSMR;ENSG00000145623|ENST00000274276|OSMR	nc|ENSG00000145623|Q99650-2|OSMR	nc|ENSG00000145623|Q99650-2|OSMR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2895385622978	2	537.286943	1072.55933	2.3807	0.0012791	2.0586	0.0011061	4.4393	0.0023852	537.2878196295248	84.968	0.51332	86.127	85.905	86.418	1.159					50	16	4	0	0	0	0.031324	3	35646	35596;35646;35684		85.357	33.088	1	17303000			17362	3113	8259	8297	20357;20358;20359	20358					0.0259552859138239
LFAVFQTTF	9	Unmodified	_LFAVFQTTF_					0	0	0		nc|ENSG00000145623|Q99650-2|OSMR;ENSG00000145623|ENST00000274276|OSMR	nc|ENSG00000145623|Q99650-2|OSMR	nc|ENSG00000145623|Q99650-2|OSMR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2896606326103	2	537.286943	1072.55933	2.6033	0.0013987	2.5698	0.0013807	5.1731	0.0027794	537.2882765792872	84.483	0.6009	86.079	85.859	86.46	1.5962					64	19	4	0	0	0	0.078975	4	35423	35377;35423;35461;35503		56.541	23.328	1	21076000			17363	3113	8259	8297	20360;20361;20362;20363	20361					0.0259552859138239
LFCETCDML	9	Unmodified	_LFCETCDML_					0	0	0		nc|ENSG00000166436|O15016-3|TRIM66;ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-2|TRIM66;nc|ENSG00000166436|O15016|TRIM66;ENSG00000166436|ENST00000646038|TRIM66;ENST00000531498.5_1_11:8665946-8673385:-|nuORF	nc|ENSG00000166436|O15016-3|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.7189208865166	2	537.718864	1073.42317	1.5856	0.00085259	-0.41564	-0.0002235	1.1699	0.00062909	537.7187770931024	67.131	0.39494	67.131	66.893	67.288	0					40	12	5	0	0	0	0.75267	1	27913	27913		5.2307	0	1	6345600			17364	3902	8260	8298	20364	20364					-0.1105999329745373
LFCETCDML	9	Unmodified	_LFCETCDML_					0	0	0		nc|ENSG00000166436|O15016-3|TRIM66;ENST00000481014.6_1_11:8646046-8673385:-|nuORF;nc|ENSG00000166436|O15016-2|TRIM66;nc|ENSG00000166436|O15016|TRIM66;ENSG00000166436|ENST00000646038|TRIM66;ENST00000531498.5_1_11:8665946-8673385:-|nuORF	nc|ENSG00000166436|O15016-3|TRIM66	nc|ENSG00000166436|O15016-3|TRIM66	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7208129763603	2	537.718864	1073.42317	2.6262	0.0014121	-0.85349	-0.00045894	1.7727	0.0009532	537.719387474894	65.622	0.72926	67.021	66.788	67.517	1.3989					95	23	7	0	0	0	0.64949	1	27497	27497		9.3474	0	1	11910000			17365	3902	8260	8298	20365	20365					-0.1105999329745373
LFCKRKVGSL	10	Unmodified	_LFCKRKVGSL_					0	0	0		ENST00000472545.6_1_11:85338711-85338780:-|nuORF	ENST00000472545.6_1_11:85338711-85338780:-|nuORF	ENST00000472545.6_1_11:85338711-85338780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8451415896416	2	575.841894	1149.66923	1.8957	0.0010916	3.0925	0.0017808	4.9882	0.0028724	575.8434594961253	71.537	1.542	72.879	71.924	73.467	1.3415					91	49	3	0	0	0	0.85124	1	30088	30088		6.7232	1.4925	1	2591100			17366	6753	8261	8299	20366	20366					0.10038630658914371
LFCLYCQI	8	2 Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))LYC(Carbamidomethyl (C))QI_	LFC(1)LYC(1)QI		LFC(43)LYC(43)QI		0	2	0			REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.7670165896416	2	558.764463	1115.51437	2.2213	0.0012412	0.94502	0.00052804	3.1663	0.0017692	558.7655293945519	63.03	0.46554	64.974	64.782	65.248	1.9444					31	14	3	0	0	0	0.56817	1	26431	26431		42.968	16.084	1	2012600	+		17367	14230	8262	8300	20367	20367					-0.03876361537822959
LFCLYCQI	8	2 Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))LYC(Carbamidomethyl (C))QI_					0	2	0			REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	558.764463	1115.51437	1.3398	0.00074863	3.5474	0.0019822	4.8872	0.0027308	558.7673791562336	65.024	0.25388	65.024	64.881	65.135	0	0.043389	0.0010843	NaN	42.968	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	521120	+		17368	14230	8262	8300							-0.03876361537822959
LFCLYCQI	8	2 Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))LYC(Carbamidomethyl (C))QI_					0	2	0			REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	558.764463	1115.51437	1.847	0.001032	3.2662	0.001825	5.1131	0.002857	558.7658775179599	64.617	0.28035	64.944	64.819	65.099	0.32689	-0.036887	0.00076993	NaN	42.968	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457650	+		17369	14230	8262	8300							-0.03876361537822959
LFCLYCQI	8	2 Carbamidomethyl (C)	_LFC(Carbamidomethyl (C))LYC(Carbamidomethyl (C))QI_					0	2	0			REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	REV__IL15|p.L19F|1|0.32|ENSG00000164136|chr4:141720513-141720513|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	558.764463	1115.51437	2.2213	0.0012412	0.94502	0.00052804	3.1663	0.0017692	558.7655293945519	63.03	0.46554	64.974	64.782	65.248	1.9444	-0.0065014	-0.001824	NaN	42.968	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2012600	+		17370	14230	8262	8300							-0.03876361537822959
LFDARSLQARW	11	Unmodified	_LFDARSLQARW_					0	0	0			REV__ENST00000356634.7_1_1:23357106-23376927:+|nuORF	REV__ENST00000356634.7_1_1:23357106-23376927:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.2483398318291	3	454.914083	1361.72042	2.533	0.0011523	-0.62358	-0.00028368	1.9094	0.00086863	454.9138120104415	40.108	0.36972	41.418	41.207	41.577	1.3102					34	11	4	0	0	0	0.9945	1	16789	16789		4.1166	0	1	4894000	+		17371	12551	8263	8301	20368	20368					0.054026709573236076
LFDGEIQV	8	Unmodified	_LFDGEIQV_					0	0	0			REV__ENSG00000197312|ENST00000480945|DDI2	REV__ENSG00000197312|ENST00000480945|DDI2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	920.4750244021416	1	920.472374	919.465098	1.5654	0.0014409	-0.26055	-0.00023983	1.3049	0.0012011	920.473167723634	67.825	0.31676	67.825	67.695	68.012	0					14	9	2	0	0	0	0.62161	1	28249	28249		38.151	6.0342	1	600200	+		17372	11668	8264	8302	20369	20369					0.002143897692576502
LFDHQQRRQVF	11	Unmodified	_LFDHQQRRQVF_					0	0	0		LLGL2-TMEM104|1|fusion;nc|ENSG00000073350|Q6P1M3-2|LLGL2;ENSG00000073350|ENST00000392550|LLGL2;ENST00000545227.6_1_17:73554011-73570984:+|nuORF	LLGL2-TMEM104|1|fusion	LLGL2-TMEM104|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.9305297732353	3	491.928503	1472.76368	2.1306	0.0010481	2.0882	0.0010272	4.2188	0.0020753	491.92935107572055	41.096	0.3192	42.989	42.8	43.119	1.8927					28	9	4	0	0	0	1.0357	1	17202	17202		1.4551	0	1	2095900			17373	899	8265	8303	20370	20370					0.04620860734598864
LFDKKQILT	9	Unmodified	_LFDKKQILT_					0	0	0			REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3353759646416	2	553.334424	1104.6543	2.5415	0.0014063	-2.2679	-0.0012549	0.27364	0.00015141	553.3330764984646	79.959	0.49615	81.21	80.987	81.483	1.2512					28	15	3	0	0	0	0.77526	1	33535	33535		4.3292	1.44	1	1087200	+		17374	9807	8266	8304	20371	20371					0.10615462062582992
LFDKKQILT	9	Unmodified	_LFDKKQILT_					0	0	0			REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	553.334424	1104.6543	2.5415	0.0014063	-2.2679	-0.0012549	0.27364	0.00015141	553.3330764984646	79.959	0.49615	81.21	80.987	81.483	1.2512	0.090552	0.00027164	NaN	4.3292	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1087200	+		17375	9807	8266	8304							0.10615462062582992
LFDKKQILT	9	Unmodified	_LFDKKQILT_					0	0	0			REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	553.334424	1104.6543	1.4676	0.0008121	-1.3768	-0.00076184	0.09083	5.0259E-05	553.3342039631581	79.586	0.4004	81.303	81.106	81.506	1.7167	0.1828	0.0012577	NaN	4.3292	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1156200	+		17376	9807	8266	8304							0.10615462062582992
LFDQYLLV	8	Unmodified	_LFDQYLLV_					0	0	0			REV__ENST00000296666.12_1_5:126860483-126860582:+|nuORF	REV__ENST00000296666.12_1_5:126860483-126860582:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1010.563037097454	1	1010.55571	1009.54843	1.9472	0.0019678	1.5363	0.0015526	3.4836	0.0035203	1010.5577327125667	80.941	0.31076	80.941	80.76	81.07	0					16	9	2	0	0	0	0.79422	1	33672	33672		21.747	3.6003	1	908800	+		17377	12296	8267	8305	20372	20372					0.044041262170935624
LFDQYLLV	8	Unmodified	_LFDQYLLV_					0	0	0			REV__ENST00000296666.12_1_5:126860483-126860582:+|nuORF	REV__ENST00000296666.12_1_5:126860483-126860582:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1010.562792956829	1	1010.55571	1009.54843	2.1969	0.0022201	-0.96687	-0.00097708	1.23	0.001243	1010.5563051458704	80.452	0.27866	80.743	80.593	80.871	0.29055					13	8	2	0	0	0	0.87701	1	33598	33598		10.824	0	1	718540	+		17378	12296	8267	8305	20373	20373					0.044041262170935624
LFDWLVSV	8	Unmodified	_LFDWLVSV_					0	0	0		nc|ENSG00000278259|Q96H55-3|MYO19;nc|ENSG00000278259|Q96H55-4|MYO19;ENSG00000278259|ENST00000614623|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	nc|ENSG00000278259|Q96H55-3|MYO19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7684203982353	2	489.768386	977.522219	1.9989	0.00097897	-0.80497	-0.00039425	1.1939	0.00058472	489.7677960469543	41.301	0.30104	43.194	43.024	43.325	1.8927					14	9	2	0	0	0	0.82039	1	17314	17314		19.439	2.4967	1	1298400			17379	5476	8268	8306	20374	20374					0.03255857045621724
LFDWVNRP	8	Unmodified	_LFDWVNRP_					0	0	0			REV__nc|ENSG00000214881|A8MWL7|TMEM14DP	REV__nc|ENSG00000214881|A8MWL7|TMEM14DP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	523.2726928591728	2	523.774534	1045.53451	1.8816	0.00098553	-1.999	-0.001047	-0.11742	-6.1504E-05	523.7743265813172	52.024	0.82474	52.349	52.1	52.924	0.32553					34	26	2	0	0	0	2.3239	1	21780	21780		2.5775	0.27475	1	451700	+		17380	14536	8269	8307	20375	20375					0.013568935086595957
LFDYMEEL	8	Unmodified	_LFDYMEEL_					0	0	0			REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	REV__tr|A0A7D6VVK9|A0A7D6VVK9_9CLOTGlutathionebiosynthesisbifunctionalproteinGshABOS=ClostridiumintestinaleOX=36845GN=gshABPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2415038943291	2	530.238801	1058.46305	2.0036	0.0010624	-1.6817	-0.0008917	0.32194	0.0001707	530.2394259717486	65.264	0.34335	67.172	66.969	67.312	1.9085					27	10	3	0	0	0	0.69649	1	27385	27385		30.225	9.3536	1	1710200	+		17381	15530	8270	8308	20376	20376					-0.06384407030873263
LFEGKWYTL	9	Unmodified	_LFEGKWYTL_					0	0	0			REV__ENST00000544949.5_1_12:6942900-6943209:+|nuORF	REV__ENST00000544949.5_1_12:6942900-6943209:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8094360232353	2	578.8055	1155.59645	2.2053	0.0012765	0.6958	0.00040274	2.9011	0.0016792	578.8059816064052	41.211	0.34568	42.537	42.305	42.65	1.3254					29	10	3	0	0	0	0.15635	1	17239	17239		37.974	3.8716	1	6216800	+		17382	13798	8271	8309	20377	20377					0.02487200137147738
LFEGSPTR	8	Unmodified	_LFEGSPTR_					0	0	0			REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	REV__nc|ENSG00000185104|Q9UNN5-2|FAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7383605837822	2	453.737617	905.460681	-0.033355	-1.5135E-05	0.89591	0.00040651	0.86256	0.00039137	453.7379320219785	12.11	0.34545	12.804	12.634	12.98	0.69396					25	10	3	0	0	0	0.76103	1	5079	5079		24.674	0	1	3519500	+		17383	11449	8272	8310	20378	20378					0.004169253463373934
LFFAGLSIFI	10	Unmodified	_LFFAGLSIFI_					0	0	0			REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3330566287041	2	564.328611	1126.64267	1.8296	0.0010325	1.3895	0.00078412	3.219	0.0018166	564.3296701155496	84.39	0.31627	85.549	85.402	85.719	1.159					23	9	3	0	0	0	0.48057	1	35446	35446		28.487	1.6032	1	2764200	+		17384	12176	8273	8311	20379	20379					0.08441265039232348
LFFAGLSIFI	10	Unmodified	_LFFAGLSIFI_					0	0	0			REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	564.328611	1126.64267	1.8296	0.0010325	1.3895	0.00078412	3.219	0.0018166	564.3296701155496	84.39	0.31627	85.549	85.402	85.719	1.159	0.0030148	0.00085749	NaN	28.487	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2764200	+		17385	12176	8273	8311							0.08441265039232348
LFFAGLSIFI	10	Unmodified	_LFFAGLSIFI_					0	0	0			REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	REV__ENST00000258796.11_1_7:2704316-2704358:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.328611	1126.64267	1.9125	0.0010793	-0.42349	-0.00023899	1.489	0.0008403	564.3284051187827	83.905	0.33712	85.543	85.38	85.717	1.6379	-0.0030148	-0.0011887	NaN	28.487	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3306200	+		17386	12176	8273	8311							0.08441265039232348
LFFAWPLI	8	Unmodified	_LFFAWPLI_					0	0	0			REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7924682497978	2	503.791664	1005.56878	2.3248	0.0011712	1.0691	0.00053859	3.3939	0.0017098	503.7915741898387	49.604	0.43354	50.995	50.796	51.229	1.3911					22	13	2	0	0	0	0.67839	1	20814	20814		32.454	4.2804	1	1782200	+		17387	14735	8274	8312	20380	20380					0.0662134166755095
LFFAWPLI	8	Unmodified	_LFFAWPLI_					0	0	0			REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	503.791664	1005.56878	2.3248	0.0011712	1.0691	0.00053859	3.3939	0.0017098	503.7915741898387	49.604	0.43354	50.995	50.796	51.229	1.3911	0.016576	-0.00064419	NaN	32.454	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1782200	+		17388	14735	8274	8312							0.0662134166755095
LFFAWPLI	8	Unmodified	_LFFAWPLI_					0	0	0			REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	REV__tr|A0A553SG80|A0A553SG80_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_10365PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.791664	1005.56878	1.6108	0.0008115	2.569	0.0012942	4.1797	0.0021057	503.79187640536315	48.985	0.36858	50.962	50.792	51.161	1.9772	-0.016576	0.00086707	NaN	32.454	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1644500	+		17389	14735	8274	8312							0.0662134166755095
LFFFFFFFFEM	11	Unmodified	_LFFFFFFFFEM_					0	0	0		ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.5813476443291	3	523.582282	1567.72502	0.43094	0.00022563	-1.7317	-0.00090671	-1.3008	-0.00068108	523.5813338875164	16.442	0.18726	17.339	17.238	17.425	0.89794					20	8	3	0	0	0	1.0388	1	6843	6843		0.50596	0.051438	1	1986200			17390	7178	8275	8313	20381	20381					-0.036135809441702804
LFFFFFFFFEM	11	Unmodified	_LFFFFFFFFEM_					0	0	0		ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	523.582282	1567.72502	0.24173	0.00012657	-0.81375	-0.00042607	-0.57202	-0.0002995	523.5816720985188	16.227	0.19105	17.267	17.153	17.344	1.0392	-0.036484	0.00047534	NaN	0.50596	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2051500			17391	7178	8275	8313							-0.036135809441702804
LFFFFFFSLFF	11	Unmodified	_LFFFFFFSLFF_					0	0	0			REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|68|3|anti-sense	REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|68|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.5937682986259	3	503.593287	1507.75803	-0.22989	-0.00011577	-1.3247	-0.00066711	-1.5546	-0.00078288	503.5927685161082	51.152	0.82965	53.127	52.727	53.556	1.9753					47	30	2	0	0	0	0.68498	3	21428	21335;21387;21428		18.721	5.7134	1	5080100	+		17392	14277	8276	8314	20382;20383;20384	20384					0.024463691702294454
LFFHDDLTL	9	Unmodified	_LFFHDDLTL_					0	0	0		tr|A0A553SGB8|A0A553SGB8_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_10575PE=4SV=1	tr|A0A553SGB8|A0A553SGB8_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_10575PE=4SV=1	tr|A0A553SGB8|A0A553SGB8_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_10575PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	560.2521850466728	2	560.787307	1119.56006	3.1941	0.0017912	0.48403	0.00027144	3.6781	0.0020626	560.7880685198276	81.242	0.21365	82.938	82.86	83.074	1.6959					9	6	2	0	0	0	0.10844	1	34107	34107		16.942	4.4107	1	463220			17393	16103	8277	8315	20385	20385					0.005063232404154405
LFFHFVNL	8	Unmodified	_LFFHFVNL_					0	0	0			REV__ENST00000520639.1_1_5:153873511-153874012:+|nuORF	REV__ENST00000520639.1_1_5:153873511-153874012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.7855102419853	2	518.78437	1035.55419	1.4266	0.00074011	2.844	0.0014754	4.2707	0.0022156	518.7857256742	77.666	0.54892	79.417	78.977	79.526	1.7514					31	17	3	0	0	0	0.66111	1	32555	32555		34.187	1.8818	1	6909800	+		17394	13627	8278	8316	20386	20386					0.0378326951940835
LFFIFVYFF	9	Unmodified	_LFFIFVYFF_					0	0	0			REV__ENST00000310137.4_1_11:66394295-66394520:+|nuORF	REV__ENST00000310137.4_1_11:66394295-66394520:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8350707888603	2	621.833529	1241.6525	1.5198	0.00094508	0.15602	9.7021E-05	1.6759	0.0010421	621.8334163473119	84.522	0.47092	85.681	85.372	85.843	1.159					22	14	2	0	0	0	0.39097	1	35485	35485		20.871	2.7362	1	1868700	+		17395	12356	8279	8317	20387	20387					0.04134453044594011
LFFLFLIRDV	10	Unmodified	_LFFLFLIRDV_					0	0	0			REV__ENST00000434116.6_1_15:65903875-65903989:+|nuORF	REV__ENST00000434116.6_1_15:65903875-65903989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8834716677666	2	641.881542	1281.74853	2.3142	0.0014855	0.42258	0.00027124	2.7368	0.0017567	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	0.87343	2	33743	33743;33794		4.3292	0	1	10103000	+		17396	13041	8280	8318	20388;20389	20388					0.1189260088467563
LFFPNDEVM	9	Unmodified	_LFFPNDEVM_					0	0	0		nc|ENSG00000117385|Q32P28-2|P3H1;ENST00000495874.5_1_1:43222117-43232675:-|nuORF;ENST00000460031.5_1_1:43220834-43232642:-|nuORF;nc|ENSG00000117385|Q32P28-4|P3H1;ENSG00000117385|ENST00000296388|P3H1;nc|ENSG00000117385|Q32P28-3|P3H1	nc|ENSG00000117385|Q32P28-2|P3H1	nc|ENSG00000117385|Q32P28-2|P3H1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1013061404228	3	371.175804	1110.50558	2.1006	0.00077968	1.2875	0.0004779	3.3881	0.0012576	371.176164642499	84.473	0.23882	86.069	85.919	86.158	1.5962					11	7	2	0	0	0	0.11938	1	35463	35463		0.26902	0	1	768940			17397	2005	8281	8319	20390	20390					-0.04525011902637743
LFFPVFWDP	9	Unmodified	_LFFPVFWDP_					0	0	0		chr10:54897500-54948525|104|12.09|0.55|4.47|-|0|TE_info:MLT2B2,MLT2B2_dup1453,ERVL,LTR,donor,+,54948525,54948798|PCDH15,None|2	chr10:54897500-54948525|104|12.09|0.55|4.47|-|0|TE_info:MLT2B2,MLT2B2_dup1453,ERVL,LTR,donor,+,54948525,54948798|PCDH15,None|2	chr10:54897500-54948525|104|12.09|0.55|4.47|-|0|TE_info:MLT2B2,MLT2B2_dup1453,ERVL,LTR,donor,+,54948525,54948798|PCDH15,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.2953979372978	2	584.29731	1166.58007	2.3272	0.0013598	-3.7972	-0.0022187	-1.47	-0.00085893	584.2948189239235	73.971	0.28627	74.296	74.105	74.391	0.32494					17	8	3	0	0	0	0.5697	1	30935	30935		12.532	0	1	591780			17398	178	8282	8320	20391	20391					0.003441189710429171
LFFQAFRDLAG	11	Unmodified	_LFFQAFRDLAG_					0	0	0			REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	642.8416015505791	2	642.840405	1283.66626	1.8361	0.0011803	-0.065908	-4.2368E-05	1.7702	0.001138	642.8403239123991	80.503	0.40253	80.793	80.593	80.995	0.29056					41	12	4	0	0	0	0.1347	2	33671	33623;33671		49.554	18.918	1	6205300	+		17399	9557	8283	8321	20392;20393	20393					0.03577078805756173
LFFQAFRDLAG	11	Unmodified	_LFFQAFRDLAG_					0	0	0			REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.8423950076103	2	642.840405	1283.66626	2.3173	0.0014897	0.42289	0.00027185	2.7402	0.0017615	642.8407045019146	79.576	0.46431	80.827	80.614	81.078	1.2512					48	14	4	0	0	0	0.05109	2	33399	33399;33439		66.457	7.7779	1	9924100	+		17400	9557	8283	8321	20394;20395	20394					0.03577078805756173
LFFQAFRDLAG	11	Unmodified	_LFFQAFRDLAG_					0	0	0			REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.8415405154228	2	642.840405	1283.66626	1.7981	0.0011559	1.2258	0.000788	3.0239	0.0019439	642.8411984805595	79.035	0.43372	80.77	80.567	81.001	1.735					42	13	4	0	0	0	0.05109	1	33174	33174		66.457	7.7779	1	18703000	+		17401	9557	8283	8321	20396	20396					0.03577078805756173
LFFQAFRDLAG	11	Unmodified	_LFFQAFRDLAG_					0	0	0			REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	REV__ENST00000478361.6_1_10:94240585-94297282:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	642.840405	1283.66626	1.8361	0.0011803	-0.065908	-4.2368E-05	1.7702	0.001138	642.8403239123991	80.503	0.40253	80.793	80.593	80.995	0.29056	-0.065876	-0.00024562	NaN	66.457	41	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6205300	+		17402	9557	8283	8321							0.03577078805756173
LFFWFFLF	8	Unmodified	_LFFWFFLF_					0	0	0			REV__ENST00000471799.1_1_22:26886916-26887635:+|nuORF	REV__ENST00000471799.1_1_22:26886916-26887635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.8106567263603	2	583.807314	1165.60008	1.4538	0.00084874	2.4419	0.0014256	3.8957	0.0022743	583.8078164000116	53.901	0.6804	55.302	55.086	55.767	1.4005					43	22	3	0	0	0	0.76629	1	22655	22655		24.21	4.848	1	2220900	+		17403	13288	8284	8322	20397	20397					0.023899147016436473
LFGAAAIT	8	Unmodified	_LFGAAAIT_					0	0	0			REV__tr|A0A553SUP6|A0A553SUP6_NIACIFattyaciddesaturaseOS=NialliacirculansOX=1397GN=CEQ21_04985PE=4SV=1	REV__tr|A0A553SUP6|A0A553SUP6_NIACIFattyaciddesaturaseOS=NialliacirculansOX=1397GN=CEQ21_04985PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5111877322197	2	382.221072	762.42759	0.41716	0.00015945	-0.44949	-0.0001718	-0.032329	-1.2357E-05	382.2207496786785	22.671	0.14949	23.885	23.799	23.948	1.2145					7	4	2	0	0	0	2.3239	1	9464	9464		5.2307	0	1	565510	+		17404	15300	8285	8323	20398	20398					0.036873432942570616
LFGFFGAIVL	10	Unmodified	_LFGFFGAIVL_					0	0	0			REV__tr|A0A7D6ZF03|A0A7D6ZF03_9CLOTMagnesiumtransporterMgtEOS=ClostridiumintestinaleOX=36845GN=mgtEPE=3SV=1	REV__tr|A0A7D6ZF03|A0A7D6ZF03_9CLOTMagnesiumtransporterMgtEOS=ClostridiumintestinaleOX=36845GN=mgtEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3142578005791	2	542.315503	1082.61645	2.4274	0.0013164	-2.9347	-0.0015915	-0.50722	-0.00027507	542.3137603802221	58.107	0.3208	58.43	58.236	58.556	0.32298					17	9	2	0	0	0	0.70643	1	24317	24317		18.135	2.2878	1	1907100	+		17405	15626	8286	8324	20399	20399					0.07844995867753823
LFGFSFNAS	9	Unmodified	_LFGFSFNAS_					0	0	0		ENSG00000196862|ENST00000408999|RGPD4	ENSG00000196862|ENST00000408999|RGPD4	ENSG00000196862|ENST00000408999|RGPD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2415038943291	2	495.239993	988.465432	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.186	1	39.47	38.97	39.97	1.284								0	0	0	0.42693	1	16024	16024		1.8442	0	1				17406	4965	8287	8325	20400	20400					-0.029261905109024156
LFGIVSEVML	10	Unmodified	_LFGIVSEVML_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.3091308474541	2	554.309561	1106.60457	2.3216	0.0012869	-1.2024	-0.00066648	1.1193	0.00062042	554.3088162452212	75.846	0.37755	76.168	75.956	76.333	0.32163					33	11	4	0	0	0	0.51515	1	31673	31673		26.884	0	1	2913000			17407	7765	8288	8326	20401	20401					0.05553011062261248
LFGIVSEVML	10	Unmodified	_LFGIVSEVML_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3112060427666	2	554.309561	1106.60457	3.0739	0.0017039	0.061123	3.3881E-05	3.1351	0.0017378	554.3102390044436	74.768	0.46422	76.074	75.847	76.311	1.3063					41	14	4	0	0	0	0.38674	1	31341	31341		34.102	0	1	7922200			17408	7765	8288	8326	20402	20402					0.05553011062261248
LFGIVSEVML	10	Unmodified	_LFGIVSEVML_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|183|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3109619021416	2	554.309561	1106.60457	2.8795	0.0015961	-0.17441	-9.6677E-05	2.7051	0.0014995	554.3102728295421	74.28	0.40559	76.076	75.869	76.275	1.7962					36	12	4	0	0	0	0.25611	1	31124	31124		42.095	0	1	6686200			17409	7765	8288	8326	20403	20403					0.05553011062261248
LFGSGVFISL	10	Unmodified	_LFGSGVFISL_					0	0	0			REV__tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	REV__tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2968017458916	2	520.294768	1038.57498	3.3609	0.0017486	0.16661	8.6684E-05	3.5275	0.0018353	520.2955469682157	72.659	0.46631	73.989	73.822	74.288	1.3297					30	14	3	0	0	0	0.41677	1	30528	30528		32.305	3.2239	1	6680400	+		17410	14769	8289	8327	20404	20404					0.057238151084447964
LFGVMREPF	9	Unmodified	_LFGVMREPF_					0	0	0			REV__ENSG00000158008|ENST00000374280|EXTL1	REV__ENSG00000158008|ENST00000374280|EXTL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.7413207888603	2	548.28642	1094.55829	2.4781	0.0013587	3.7028	0.0020302	6.1809	0.0033889	548.2895012816326	71.951	0.45953	73.775	73.445	73.904	1.824					29	14	3	0	0	0	0.11518	1	30154	30154		11.64	0.81637	1	1392800	+		17411	10544	8290	8328	20405	20405					0.014789909508181154
LFGYSCFEL	9	Unmodified	_LFGYSCFEL_					0	0	0		ENST00000244050.2_1_20:48604632-48604926:+|nuORF	ENST00000244050.2_1_20:48604632-48604926:+|nuORF	ENST00000244050.2_1_20:48604632-48604926:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.8050414919853	2	539.749336	1077.48412	3.5906	0.001938	1.3477	0.00072743	4.9383	0.0026655	539.749355766417	91.107	0.25529	92.473	92.342	92.597	1.366					13	7	2	0	0	0	0.10844	1	38340	38340		16.942	4.4107	1	320860			17412	5572	8291	8329	20406	20406					-0.05152396931362091
LFGYSCFEL	9	Unmodified	_LFGYSCFEL_					0	0	0		ENST00000244050.2_1_20:48604632-48604926:+|nuORF	ENST00000244050.2_1_20:48604632-48604926:+|nuORF	ENST00000244050.2_1_20:48604632-48604926:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	539.749336	1077.48412	4.2642	0.0023016	6.7231	0.0036288	10.987	0.0059304	539.7530401238968	91.863	0.24902	92.799	92.706	92.955	0.93624	0.16322	0.0027111	NaN	16.942	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358460			17413	5572	8291	8329							-0.05152396931362091
LFHIPRVT	8	Unmodified	_LFHIPRVT_					0	0	0		nc|ENSG00000155066|Q8N271-3|PROM2;ENST00000487138.5_1_2:95944617-95954741:+|nuORF;nc|ENSG00000155066|Q8N271-2|PROM2;ENSG00000155066|ENST00000317620|PROM2	nc|ENSG00000155066|Q8N271-3|PROM2	nc|ENSG00000155066|Q8N271-3|PROM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1987182497978	3	328.199272	981.575986	-0.63489	-0.00020837	1.2428	0.00040788	0.60791	0.00019951	328.19963786516615	32.144	0.68638	33.426	33.141	33.827	1.2813					82	23	5	0	0	0	0.87935	1	13560	13560		6.7232	0	1	112710000			17414	3406	8292	8330	20407	20407					0.08446074267999393
LFHIPRVT	8	Unmodified	_LFHIPRVT_					0	0	0		nc|ENSG00000155066|Q8N271-3|PROM2;ENST00000487138.5_1_2:95944617-95954741:+|nuORF;nc|ENSG00000155066|Q8N271-2|PROM2;ENSG00000155066|ENST00000317620|PROM2	nc|ENSG00000155066|Q8N271-3|PROM2	nc|ENSG00000155066|Q8N271-3|PROM2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	328.199272	981.575986	0.66165	0.00021715	0.53961	0.0001771	1.2013	0.00039425	328.19942166780146	32.83	0.34619	33.124	32.959	33.305	0.29431	-0.18417	-2.4412E-05	NaN	6.7232	52	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	80397000			17415	3406	8292	8330							0.08446074267999393
LFHKKIES	8	Unmodified	_LFHKKIES_					0	0	0		ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI;BPI|p.P244Rfs*6|1|0.16|ENSG00000101425|chr20:38320236-38320237|-/G|frameshift_variant	ENSG00000101425|ENST00000642449|BPI	ENSG00000101425|ENST00000642449|BPI	MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2924682497978	2	501.292559	1000.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.569	1	64.898	64.398	65.398	0.32899								0	0	0	1.0178	1	27044	27044		5.7604	0	1				17416	1349	8293	8331	20408	20408					0.07030350685511166
LFICIAWSI	9	Unmodified	_LFICIAWSI_					0	0	0			REV__ENST00000488449.1_1_1:20113528-20124574:-|nuORF	REV__ENST00000488449.1_1_1:20113528-20124574:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1942626833916	2	533.293714	1064.57287	5.5738	0.0029725	0.75149	0.00040077	6.3253	0.0033733	533.2938335710636	89.199	0.51451	90.219	89.914	90.429	1.0199					25	15	2	0	0	0	0.11645	1	37678	37678		8.5933	6.5335	1	2541300	+		17417	13411	8294	8332	20409	20409					0.04317063098960716
LFIDNIFRF	9	Unmodified	_LFIDNIFRF_					0	0	0		ENSG00000110955|ENST00000262030|ATP5F1B;tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	ENSG00000110955|ENST00000262030|ATP5F1B	ENSG00000110955|ENST00000262030|ATP5F1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8293945193291	2	592.826766	1183.63898	5.2966	0.00314	0.20621	0.00012225	5.5028	0.0032622	592.8267695915838	89.458	0.346	90.478	90.3	90.646	1.0199					20	10	3	0	0	0	0.031145	1	37703	37703		85.642	23.069	1	2511700			17418	1722	8295	8333	20410	20410					0.05450595265369884
LFIDNIFRF	9	Unmodified	_LFIDNIFRF_					0	0	0		ENSG00000110955|ENST00000262030|ATP5F1B;tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	ENSG00000110955|ENST00000262030|ATP5F1B	ENSG00000110955|ENST00000262030|ATP5F1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	592.826766	1183.63898	4.7398	0.0028099	0.96611	0.00057274	5.7059	0.0033826	592.8268410404335	89.037	0.35003	90.483	90.275	90.625	1.4467	0.0027129	0.0005195	NaN	85.642	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1942100			17419	1722	8295	8333							0.05450595265369884
LFIGKHLKPL	10	Unmodified	_LFIGKHLKPL_					0	0	0		ENSG00000123561|ENST00000372563|SERPINA7	ENSG00000123561|ENST00000372563|SERPINA7	ENSG00000123561|ENST00000372563|SERPINA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2541076540947	3	389.253376	1164.7383	0.20055	7.8065E-05	2.1715	0.00084525	2.372	0.00092332	389.254251958102	29.959	0.52049	31.241	31.012	31.532	1.2825					67	16	5	0	0	0	0.89803	1	12663	12663		0.69767	0	1	79085000			17420	2195	8296	8334	20411	20411					0.16252037950130216
LFILARYLW	9	Unmodified	_LFILARYLW_					0	0	0			REV__tr|A0A553SIY0|A0A553SIY0_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	REV__tr|A0A553SIY0|A0A553SIY0_NIACICd(2+)-exportingATPaseOS=NialliacirculansOX=1397GN=cadAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8581420779228	2	597.855327	1193.6961	2.5642	0.001533	2.2485	0.0013442	4.8126	0.0028772	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.75267	1	32336	32336		5.2307	0	1	10594000	+		17421	14875	8297	8335	20412	20412					0.10700062541741318
LFILLGDVPL	10	Unmodified	_LFILLGDVPL_					0	0	0		tr|A0A553SNY1|A0A553SNY1_NIACIPhosphatidatecytidylyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25330PE=3SV=1	tr|A0A553SNY1|A0A553SNY1_NIACIPhosphatidatecytidylyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25330PE=3SV=1	tr|A0A553SNY1|A0A553SNY1_NIACIPhosphatidatecytidylyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_25330PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	366.5294067263603	3	367.230237	1098.66888	-0.21515	-7.9008E-05	2.3145	0.00084996	2.0994	0.00077095	367.23123924031273	30.023	0.21669	31.305	31.193	31.409	1.2825					10	6	2	0	0	0	0.12519	1	12627	12627		1.9064	1.6705	1	1111900			17422	16441	8298	8336	20413	20413					0.12349534210716229
LFIWLKMR	8	Unmodified	_LFIWLKMR_					0	0	0		ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8308593630791	2	553.830798	1105.64704	1.2785	0.00070807	-0.59965	-0.00033211	0.67885	0.00037597	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.88958	2	30295	30295;30335		2.8892	0	1	6275300			17423	4112	8299	8337	20414;20415	20414					0.09844450981131558
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9726440310478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.546	1	28.546	28.046	29.046	0								0	0	0	0.63775	1	11945	11945		1.3295	0	1		+		17424	9995	8300	8338	20416	20416					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9697143435478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.846	1	28.846	28.346	29.346	0								0	0	0	0.63775	1	12073	12073		1.3295	0	1		+		17425	9995	8300	8338	20417	20417					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9694702029228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.776	1	29.776	29.276	30.276	0								0	0	0	0.63775	1	12466	12466		1.3295	0	1		+		17426	9995	8300	8338	20418	20418					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9695922732353	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.977	1	29.977	29.477	30.477	0								0	0	0	0.63775	1	12552	12552		1.3295	0	1		+		17427	9995	8300	8338	20419	20419					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9703857302666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.571	1	30.571	30.071	31.071	0								0	0	0	0.63775	1	12803	12803		1.3295	0	1		+		17428	9995	8300	8338	20420	20420					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9706909060478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.207	1	31.207	30.707	31.707	0								0	0	0	0.63775	1	13074	13074		1.3295	0	1		+		17429	9995	8300	8338	20421	20421					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9733154177666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.671	1	31.671	31.171	32.171	0								0	0	0	0.63775	1	13271	13271		1.3295	0	1		+		17430	9995	8300	8338	20422	20422					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719726443291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.071	1	32.071	31.571	32.571	0								0	0	0	0.63775	1	13435	13435		1.3295	0	1		+		17431	9995	8300	8338	20423	20423					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9699584841728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.236	1	32.236	31.736	32.736	0								0	0	0	0.63775	1	13505	13505		1.3295	0	1		+		17432	9995	8300	8338	20424	20424					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9711791872978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.695	1	32.695	32.195	33.195	0								0	0	0	0.63775	1	13698	13698		1.3295	0	1		+		17433	9995	8300	8338	20425	20425					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9730712771416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.909	1	32.909	32.409	33.409	0								0	0	0	0.63775	1	13787	13787		1.3295	0	1		+		17434	9995	8300	8338	20426	20426					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9723998904228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.546	1	39.546	39.046	40.046	0								0	0	0	0.63775	1	16574	16574		1.3295	0	1		+		17435	9995	8300	8338	20427	20427					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9713012576103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.802	1	39.802	39.302	40.302	0								0	0	0	0.63775	1	16681	16681		1.3295	0	1		+		17436	9995	8300	8338	20428	20428					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9727661013603	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.983	1	39.983	39.483	40.483	0								0	0	0	0.63775	1	16756	16756		1.3295	0	1		+		17437	9995	8300	8338	20429	20429					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9728881716728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.118	1	40.118	39.618	40.618	0								0	0	0	0.63775	1	16810	16810		1.3295	0	1		+		17438	9995	8300	8338	20430	20430					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9703857302666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.269	1	40.269	39.769	40.769	0								0	0	0	0.63775	1	16872	16872		1.3295	0	1		+		17439	9995	8300	8338	20431	20431					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9712402224541	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.4	1	40.4	39.9	40.9	0								0	0	0	0.63775	1	16924	16924		1.3295	0	1		+		17440	9995	8300	8338	20432	20432					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9733154177666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.678	1	40.678	40.178	41.178	0								0	0	0	0.63775	1	17042	17042		1.3295	0	1		+		17441	9995	8300	8338	20433	20433					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9709960818291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.953	1	40.953	40.453	41.453	0								0	0	0	0.63775	1	17153	17153		1.3295	0	1		+		17442	9995	8300	8338	20434	20434					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9717285037041	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.158	1	41.158	40.658	41.658	0								0	0	0	0.63775	1	17237	17237		1.3295	0	1		+		17443	9995	8300	8338	20435	20435					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9695312380791	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.545	1	41.545	41.045	42.045	0								0	0	0	0.63775	1	17393	17393		1.3295	0	1		+		17444	9995	8300	8338	20436	20436					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9724609255791	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.658	1	41.658	41.158	42.158	0								0	0	0	0.63775	1	17439	17439		1.3295	0	1		+		17445	9995	8300	8338	20437	20437					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9713012576103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.799	1	41.799	41.299	42.299	0								0	0	0	0.63775	1	17495	17495		1.3295	0	1		+		17446	9995	8300	8338	20438	20438					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9785034060478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.921	1	41.921	41.421	42.421	0								0	0	0	0.63775	1	17545	17545		1.3295	0	1		+		17447	9995	8300	8338	20439	20439					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9721557497978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.078	1	42.078	41.578	42.578	0								0	0	0	0.63775	1	17610	17610		1.3295	0	1		+		17448	9995	8300	8338	20440	20440					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9742309451103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.287	1	42.287	41.787	42.787	0								0	0	0	0.63775	1	17698	17698		1.3295	0	1		+		17449	9995	8300	8338	20441	20441					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9739868044853	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.63	1	43.63	43.13	44.13	0								0	0	0	0.63775	1	18263	18263		1.3295	0	1		+		17450	9995	8300	8338	20442	20442					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9725219607353	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.362	1	44.362	43.862	44.862	0								0	0	0	0.63775	1	18563	18563		1.3295	0	1		+		17451	9995	8300	8338	20443	20443					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9741088747978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.515	1	44.515	44.015	45.015	0								0	0	0	0.63775	1	18628	18628		1.3295	0	1		+		17452	9995	8300	8338	20444	20444					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9716674685478	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.791	1	45.791	45.291	46.291	0								0	0	0	0.63775	1	19156	19156		1.3295	0	1		+		17453	9995	8300	8338	20445	20445					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9721557497978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.117	1	46.117	45.617	46.617	0								0	0	0	0.63775	1	19287	19287		1.3295	0	1		+		17454	9995	8300	8338	20446	20446					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9725829958916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.234	1	46.234	45.734	46.734	0								0	0	0	0.63775	1	19334	19334		1.3295	0	1		+		17455	9995	8300	8338	20447	20447					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9730712771416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.391	1	46.391	45.891	46.891	0								0	0	0	0.63775	1	19397	19397		1.3295	0	1		+		17456	9995	8300	8338	20448	20448					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9723998904228	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.664	1	46.664	46.164	47.164	0								0	0	0	0.63775	1	19506	19506		1.3295	0	1		+		17457	9995	8300	8338	20449	20449					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719726443291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.878	1	49.878	49.378	50.378	0								0	0	0	0.63775	1	20815	20815		1.3295	0	1		+		17458	9995	8300	8338	20450	20450					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9735595583916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.005	1	50.005	49.505	50.505	0								0	0	0	0.63775	1	20866	20866		1.3295	0	1		+		17459	9995	8300	8338	20451	20451					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9746581912041	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.361	1	51.361	50.861	51.861	0								0	0	0	0.63775	1	21420	21420		3.2813	1.9518	1		+		17460	9995	8300	8338	20452	20452					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9716064333916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.925	1	52.925	52.425	53.425	0								0	0	0	0.63775	1	22071	22071		0.30703	0	1		+		17461	9995	8300	8338	20453	20453					0.2410227080374625
LFIYLLIIRIK	11	Unmodified	_LFIYLLIIRIK_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	702.9717285037041	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.69	1	29.976	29.476	30.476	0.28546								0	0	0	0.63775	1	12432	12432		1.3295	0	1		+		17462	9995	8300	8338	20454	20454					0.2410227080374625
LFKDSSFYL	9	Unmodified	_LFKDSSFYL_					0	0	0			REV__tr|A0A7D7A1V4|A0A7D7A1V4_9CLOTATPphosphoribosyltransferaseregulatorysubunitOS=ClostridiumintestinaleOX=36845GN=hisZPE=3SV=1	REV__tr|A0A7D7A1V4|A0A7D7A1V4_9CLOTATPphosphoribosyltransferaseregulatorysubunitOS=ClostridiumintestinaleOX=36845GN=hisZPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2931396365166	2	560.289682	1118.56481	3.2632	0.0018283	4.0917	0.0022926	7.3549	0.0041209	560.2911571856397	60.88	0.31998	62.3	62.121	62.441	1.4196					25	9	4	0	0	0	0.10294	1	25513	25513		48.346	12.219	1	3270800	+		17463	15836	8301	8339	20455	20455					0.010272073831856687
LFKHRRGPL	9	Unmodified	_LFKHRRGPL_					0	0	0		SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant	SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant	SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3464233279228	2	562.345992	1122.67743	2.5962	0.00146	-1.691	-0.00095091	0.9052	0.00050904	562.3451341919299	72.302	0.73674	73.632	73.267	74.004	1.3298					37	23	2	0	0	0	0.82604	1	30353	30353		2.3027	0	1	1810400			17464	15964	8302	8340	20456	20456					0.12099945690556524
LFKILEDF	8	Unmodified	_LFKILEDF_					0	0	0		tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1024.580004870892	1	1024.57136	1023.56408	3.5171	0.0036035	2.5023	0.0025638	6.0195	0.0061674	1024.5736582691768	90.656	0.51215	91.638	91.43	91.942	0.98157					32	15	3	0	0	0	0.82039	1	38314	38314		19.439	0	1	7372400			17465	16801	8303	8341	20457	20457					0.05324412734148609
LFKILEDF	8	Unmodified	_LFKILEDF_					0	0	0		tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	tr|A0A7D6VQK3|A0A7D6VQK3_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_21445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1024.582812488079	1	1024.57136	1023.56408	4.3053	0.0044111	1.1686	0.0011973	5.4739	0.0056084	1024.5728548023963	90.208	0.40549	91.613	91.4	91.806	1.4044					30	12	3	0	0	0	0.66111	1	37945	37945		34.187	0	1	6365300			17466	16801	8303	8341	20458	20458					0.05324412734148609
LFKKKKKK	8	Unmodified	_LFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense;ENST00000527958.5_1_11:117041336-117041564:+|nuORF	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense;ENST00000527958.5_1_11:117041336-117041564:+|nuORF	ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.9183227419853	3	349.918217	1046.73282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.732	1	70.732	70.232	71.232	0								0	0	0	1.0178	1	29461	29461		0	0	1				17467	7142;39	8304	8342	20459	20459					0.21132359158309555
LFKKKVMRL	9	Unmodified	_LFKKKVMRL_					0	0	0		tr|A0A553SSC5|A0A553SSC5_NIACIDeoR/GlpRtranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02840PE=4SV=1	tr|A0A553SSC5|A0A553SSC5_NIACIDeoR/GlpRtranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02840PE=4SV=1	tr|A0A553SSC5|A0A553SSC5_NIACIDeoR/GlpRtranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2538635134697	3	388.254612	1161.74201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.471	1	33.296	32.796	33.796	1.8246								0	0	0	0.42693	1	13193	13193		0.23584	0	1				17468	16603	8305	8343	20460	20460					0.16760384452322796
LFKLRKTT	8	Unmodified	_LFKLRKTT_					0	0	0		tr|A0A7D7AG50|A0A7D7AG50_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07735PE=4SV=1	tr|A0A7D7AG50|A0A7D7AG50_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07735PE=4SV=1	tr|A0A7D7AG50|A0A7D7AG50_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07735PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2180969119072	3	336.218443	1005.6335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.66	1	103.72	103.22	104.22	0.059502								0	0	0	1.0178	1	43533	43533		1.6526	0	1				17469	17340	8306	8344	20461	20461					0.13090916473549896
LFKNDPLFF	9	Unmodified	_LFKNDPLFF_					0	0	0		nc|ENSG00000103642|P83111-2|LACTB;ENSG00000103642|ENST00000261893|LACTB	nc|ENSG00000103642|P83111-2|LACTB	nc|ENSG00000103642|P83111-2|LACTB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8101074099541	2	570.808042	1139.60153	1.905	0.0010874	1.9231	0.0010977	3.8282	0.0021852	570.8086317228875	67.587	0.48883	68.965	68.724	69.213	1.3778					36	15	3	0	0	0	0.0033884	2	28371	28325;28371		126.57	41.294	1	5826500			17470	1438	8307	8345	20462;20463	20463					0.03731503999733832
LFKNDPLFF	9	Unmodified	_LFKNDPLFF_					0	0	0		nc|ENSG00000103642|P83111-2|LACTB;ENSG00000103642|ENST00000261893|LACTB	nc|ENSG00000103642|P83111-2|LACTB	nc|ENSG00000103642|P83111-2|LACTB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8089477419853	2	570.808042	1139.60153	1.2877	0.00073504	2.1206	0.0012105	3.4083	0.0019455	570.8088107594289	67.019	0.37602	68.908	68.733	69.109	1.8889					30	11	3	0	0	0	0.010279	2	28148	28102;28148		107.19	28.459	1	4476700			17471	1438	8307	8345	20464;20465	20465					0.03731503999733832
LFKPPPQLL	9	Unmodified	_LFKPPPQLL_					0	0	0			REV__ENSG00000167858|ENST00000338694|TEKT1	REV__ENSG00000167858|ENST00000338694|TEKT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8322021365166	2	526.828778	1051.643	3.3444	0.0017619	3.3917	0.0017869	6.7361	0.0035488	526.8304937410476	94.622	0.33389	95.811	95.651	95.985	1.1887					18	10	2	0	0	0	0.54523	1	39846	39846		13.508	4.1604	1	1214300	+		17472	10882	8308	8346	20466	20466					0.11924684759082993
LFKPPPQLL	9	Unmodified	_LFKPPPQLL_					0	0	0			REV__ENSG00000167858|ENST00000338694|TEKT1	REV__ENSG00000167858|ENST00000338694|TEKT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.828778	1051.643	4.0875	0.0021534	4.2229	0.0022247	8.3104	0.0043781	526.83069441197	95.193	0.25191	95.614	95.423	95.675	0.42119	-0.098452	0.00057223	NaN	13.508	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1263200	+		17473	10882	8308	8346							0.11924684759082993
LFKPPPQLL	9	Unmodified	_LFKPPPQLL_					0	0	0			REV__ENSG00000167858|ENST00000338694|TEKT1	REV__ENSG00000167858|ENST00000338694|TEKT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.828778	1051.643	3.3444	0.0017619	3.3917	0.0017869	6.7361	0.0035488	526.8304937410476	94.622	0.33389	95.811	95.651	95.985	1.1887	0.098452	-0.00030354	NaN	13.508	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1214300	+		17474	10882	8308	8346							0.11924684759082993
LFKRFTRR	8	Unmodified	_LFKRFTRR_					0	0	0			REV__ENST00000447574.1_1_7:75932845-75933001:+|nuORF	REV__ENST00000447574.1_1_7:75932845-75933001:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3458129763603	2	562.345992	1122.67743	1.3848	0.00077873	-3.1824	-0.0017896	-1.7976	-0.0010109	562.3440565614203	74.125	1.2926	74.125	73.734	75.027	0					60	40	2	0	0	0	0.89176	1	31228	31228		0.79363	0	1	1676500	+		17475	13112	8309	8347	20467	20467					0.12099945690556524
LFKRRRQS	8	Unmodified	_LFKRRRQS_					0	0	0			REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	REV__nc|ENSG00000185567|Q8IVF2-3|AHNAK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8349487185478	2	545.833249	1089.65194	1.9974	0.0010903	-0.10135	-5.5322E-05	1.8961	0.0010349	545.8330286702136	83.397	0.83265	83.397	82.984	83.816	0					44	26	2	0	0	0	0.87803	1	34658	34658		10.183	1.5901	1	1545300	+		17476	11468	8310	8348	20468	20468					0.11070471168113727
LFLALELEP	9	Unmodified	_LFLALELEP_					0	0	0			REV__ENSG00000184344|ENST00000329913|GDF3	REV__ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8053466677666	2	522.802426	1043.5903	5.3033	0.0027726	-0.64821	-0.00033888	4.6551	0.0024337	522.8020920989891	89.519	0.4996	90.539	90.3	90.8	1.0199					35	15	3	0	0	0	0.051699	1	37692	37692		67.344	0	1	6729300	+		17477	11421	8311	8349	20469	20469					0.07024681905613761
LFLALELEP	9	Unmodified	_LFLALELEP_					0	0	0			REV__ENSG00000184344|ENST00000329913|GDF3	REV__ENSG00000184344|ENST00000329913|GDF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1044.613330066204	1	1044.59757	1043.5903	4.9725	0.0051942	3.6722	0.003836	8.6447	0.0090302	1044.601280416292	89.54	0.24964	90.56	90.397	90.646	1.0199					11	7	2	0	0	0	0.078975	1	37729	37729		56.541	0	1	2503700	+		17478	11421	8311	8349	20470	20470					0.07024681905613761
LFLDRDLMTL	10	Unmodified	_LFLDRDLMTL_					0	0	0		ENST00000592111.1_1_18:55240476-55253852:-|nuORF;ENST00000585878.1_1_18:55240476-55253852:-|nuORF;ENSG00000066926|ENST00000262093|FECH;nc|ENSG00000066926|P22830-2|FECH	ENST00000592111.1_1_18:55240476-55253852:-|nuORF	ENST00000592111.1_1_18:55240476-55253852:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	618.8355590701103	2	618.836474	1235.65839	2.4574	0.0015207	-4.3425	-0.0026873	-1.8851	-0.0011666	619.3351922924838	62.521	0.24635	62.521	62.368	62.614	0					10	7	2	0	0	0	0.77604	1	26084	26084		14.838	1.7958	1	269510			17479	813	8312	8350	20471	20471					0.049991834939874025
LFLEWLLP	8	Unmodified	_LFLEWLLP_					0	0	0			REV__ENSG00000143368|ENST00000271628|SF3B4	REV__ENSG00000143368|ENST00000271628|SF3B4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.5352355837822	3	344.203911	1029.5899	0.43175	0.00014861	0.55919	0.00019248	0.99094	0.00034109	344.20418821669796	25.344	0.2773	25.596	25.397	25.675	0.25197					12	8	2	0	0	0	2.3239	1	10586	10586		1.8442	0.6509	1	744550	+		17480	10205	8313	8351	20472	20472					0.07629306976423322
LFLFHLGV	8	Unmodified	_LFLFHLGV_					0	0	0			REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2822143435478	2	473.281463	944.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.471	1	53.471	52.971	53.971	0								0	0	0	1.0178	1	22296	22296		32.454	9.3052	1		+		17481	10857	8314	8352	20473	20473					0.07388171007767141
LFLFHLGV	8	Unmodified	_LFLFHLGV_					0	0	0			REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2838928103447	2	473.281463	944.548374	0.88317	0.00041799	0.60459	0.00028614	1.4878	0.00070413	473.28142933942047	51.417	0.32684	52.81	52.621	52.948	1.3938					23	10	3	0	0	0	0.76629	1	21501	21501		24.21	1.0615	1	3066700	+		17482	10857	8314	8352	20474	20474					0.07388171007767141
LFLFHLGV	8	Unmodified	_LFLFHLGV_					0	0	0			REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	REV__GPRC5B|p.I238Sfs*14|1|0.09|ENSG00000167191|chr16:19872135-19872135|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2819702029228	2	473.281463	944.548374	0.3262	0.00015439	1.7678	0.00083666	2.094	0.00099104	473.2820734644176	50.825	0.33697	52.801	52.575	52.912	1.9753					21	10	3	0	0	0	0.76629	1	21321	21321		24.21	1.0615	1	2821800	+		17483	10857	8314	8352	20475	20475					0.07388171007767141
LFLFLFAVGF	10	Unmodified	_LFLFLFAVGF_					0	0	0		ENSG00000152254|ENST00000375363|G6PC2	ENSG00000152254|ENST00000375363|G6PC2	ENSG00000152254|ENST00000375363|G6PC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2845336794853	3	391.895078	1172.6634	0.87476	0.00034281	-2.738	-0.001073	-1.8633	-0.00073021	391.8939793880595	48.923	0.70938	50.311	49.804	50.513	1.388					31	22	2	0	0	0	0.12545	1	20419	20419		2.086	1.0145	1	4193800			17484	3318	8315	8353	20476	20476					0.08397855418888867
LFLIKAPIF	9	Unmodified	_LFLIKAPIF_					0	0	0		tr|A0A7D6VSZ0|A0A7D6VSZ0_9CLOTFtsQ-typePOTRAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14670PE=4SV=1	tr|A0A7D6VSZ0|A0A7D6VSZ0_9CLOTFtsQ-typePOTRAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14670PE=4SV=1	tr|A0A7D6VSZ0|A0A7D6VSZ0_9CLOTFtsQ-typePOTRAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14670PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0698730349541	3	354.563439	1060.66849	-1.5617	-0.00055372	-1.8557	-0.00065795	-3.4174	-0.0012117	354.5626828047031	29.87	0.24379	29.87	29.732	29.976	0					14	7	2	0	0	0	0.11946	1	12513	12513		0	0	1	1045800			17485	16892	8316	8354	20477	20477					0.1405815928148968
LFLKNINV	8	Unmodified	_LFLKNINV_					0	0	0		nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-3|SPHK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7992126345634	2	480.797478	959.580402	2.2167	0.0010658	0.90586	0.00043553	3.1226	0.0015013	480.79776008402615	58.841	0.34863	58.841	58.656	59.005	0					26	10	3	0	0	0	0.51105	1	24504	24504		46.921	3.0626	1	2552100			17486	7826	8317	8355	20478	20478					0.09899538690888221
LFLKNINV	8	Unmodified	_LFLKNINV_					0	0	0		nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-3|SPHK2	nc|ENSG00000063176|Q9NRA0-3|SPHK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.7976257205009	2	480.797478	959.580402	3.2433	0.0015594	-0.97405	-0.00046832	2.2692	0.001091	480.7967697775188	58.273	0.31581	58.596	58.428	58.744	0.32298					21	9	3	0	0	0	0.38673	1	24407	24407		56.541	0	1	2942600			17487	7826	8317	8355	20479	20479					0.09899538690888221
LFLKSLLIQRR	11	Unmodified	_LFLKSLLIQRR_					0	0	0		ENST00000367188.4_1_1:204378978-204379047:-|nuORF	ENST00000367188.4_1_1:204378978-204379047:-|nuORF	ENST00000367188.4_1_1:204378978-204379047:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	694.3548461794853	2	693.950821	1385.88709	2.0534	0.001425	3.9486	0.0027401	6.002	0.0041651	693.9540812874104	94.017	0.15629	94.017	93.9	94.056	0					5	4	2	0	0	0	0.14606	1	39246	39246		1.3295	0	1	353740			17488	6061	8318	8356	20480	20480					0.20958143853022193
LFLLFCLHL	9	Unmodified	_LFLLFCLHL_					0	0	0		ENSG00000160233|ENST00000291592|LRRC3	ENSG00000160233|ENST00000291592|LRRC3	ENSG00000160233|ENST00000291592|LRRC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8272582888603	2	559.825181	1117.63581	2.0931	0.0011718	2.098	0.0011745	4.1911	0.0023463	559.8260429170715	60.699	0.28382	61.027	60.887	61.171	0.32809					20	8	3	0	0	0	0.39097	1	25407	25407		20.871	0	1	1747600			17489	3550	8319	8357	20481	20481					0.08169628887003455
LFLLIGGYF	9	Unmodified	_LFLLIGGYF_					0	0	0		tr|A0A553SK70|A0A553SK70_NIACIDUF5668domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18230PE=4SV=1	tr|A0A553SK70|A0A553SK70_NIACIDUF5668domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18230PE=4SV=1	tr|A0A553SK70|A0A553SK70_NIACIDUF5668domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18230PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8015014529228	2	521.802229	1041.5899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.106	1	67.015	66.515	67.515	1.9085								0	0	0	0.34787	1	27309	27309		20.871	2.7362	1				17490	16273	8320	8358	20482	20482					0.07077306976430009
LFLLKATQESI	11	Unmodified	_LFLLKATQESI_					0	0	0		tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.5842773318291	3	421.583339	1261.72819	0.75426	0.00031798	0.20763	8.7532E-05	0.96188	0.00040551	421.5836246325447	52.834	0.19287	54.235	54.121	54.313	1.4005					9	5	2	0	0	0	0.61014	1	22114	22114		20.871	0.2902	1	1521500			17491	17137	8321	8359	20483	20483					0.10779385434216238
LFLLKATQESI	11	Unmodified	_LFLLKATQESI_					0	0	0		tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	421.583339	1261.72819	0.98688	0.00041605	0.98658	0.00041592	1.9735	0.00083198	421.91810379765093	54.611	0.22289	54.611	54.502	54.725	0	0.2285	0.00082249	NaN	20.871	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802210			17492	17137	8321	8359							0.10779385434216238
LFLLKATQESI	11	Unmodified	_LFLLKATQESI_					0	0	0		tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	tr|A0A7D6ZST5|A0A7D6ZST5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17235PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	421.583339	1261.72819	2.178	0.00091819	-0.0073823	-3.1122E-06	2.1706	0.00091508	421.5832927852882	53.981	0.25124	54.302	54.16	54.411	0.32088	-0.080442	-0.00043462	NaN	20.871	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	932570			17493	17137	8321	8359							0.10779385434216238
LFLLPPRLTW	10	Unmodified	_LFLLPPRLTW_					0	0	0		ENST00000515519.5_1_5:148442977-148443214:+|nuORF	ENST00000515519.5_1_5:148442977-148443214:+|nuORF	ENST00000515519.5_1_5:148442977-148443214:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3870727419853	2	628.381709	1254.74886	2.3591	0.0014824	1.4036	0.00088201	3.7627	0.0023644	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.87699	1	32651	32651		3.9444	2.1002	1	7119900			17494	7054	8322	8360	20484	20484					0.13168020604530284
LFLLPPRLTW	10	Unmodified	_LFLLPPRLTW_					0	0	0		ENST00000515519.5_1_5:148442977-148443214:+|nuORF	ENST00000515519.5_1_5:148442977-148443214:+|nuORF	ENST00000515519.5_1_5:148442977-148443214:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3846923708916	2	628.381709	1254.74886	1.2793	0.0008039	2.0841	0.0013096	3.3634	0.0021135	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.89803	1	32494	32494		1.6526	0.17072	1	6175000			17495	7054	8322	8360	20485	20485					0.13168020604530284
LFLLTLFTSI	10	Unmodified	_LFLLTLFTSI_					0	0	0			REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3578369021416	2	584.354825	1166.6951	1.8949	0.0011073	1.9581	0.0011442	3.8531	0.0022516	584.3564719040249	76.338	0.93048	76.338	76.164	77.095	0					49	29	3	0	0	0	0.87699	1	31782	31782		3.9444	0	1	2118400	+		17496	15873	8323	8361	20486	20486					0.1184180338218539
LFLLTLFTSI	10	Unmodified	_LFLLTLFTSI_					0	0	0			REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3574706912041	2	584.354825	1166.6951	2.1623	0.0012636	2.162	0.0012634	4.3243	0.0025269	584.3561690421724	76.208	1.0234	76.529	76.209	77.232	0.32163					53	32	3	0	0	0	0.89803	1	31778	31778		1.6526	0	1	3221500	+		17497	15873	8323	8361	20487	20487					0.1184180338218539
LFLLTLFTSI	10	Unmodified	_LFLLTLFTSI_					0	0	0			REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	REV__tr|A0A7D7A4R3|A0A7D7A4R3_9CLOTAccessorygeneregulatorBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3582031130791	2	584.354825	1166.6951	2.8591	0.0016707	2.8418	0.0016606	5.701	0.0033314	584.3564830012283	74.225	0.87592	76.021	75.869	76.745	1.7962					48	27	3	0	0	0	0.846	1	31246	31246		7.2892	0	1	1865600	+		17498	15873	8323	8361	20488	20488					0.1184180338218539
LFLNYRNLHHF	11	Unmodified	_LFLNYRNLHHF_					0	0	0		ENST00000560213.1_1_15:99796138-99796378:+|nuORF;ENST00000558500.5_1_15:99796138-99837514:+|nuORF;LRRC28|p.S231Rfs*22|1|0.07|ENSG00000168904|chr15:99352468-99352469|-/ATGGTTAGCAAGACTGCTCAGGACTCTGT|frameshift_variant;nc|ENSG00000168904|Q86X40-2|LRRC28;ENSG00000168904|ENST00000301981|LRRC28	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.9305908083916	3	491.929844	1472.7677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.461	1	42.786	42.286	43.286	1.3254								0	0	0	0.63775	1	17383	17383		1.3296	0.63198	1				17499	4057	8324	8362	20489	20489					0.05022950228294576
LFLNYRNLHHF	11	Unmodified	_LFLNYRNLHHF_					0	0	0		ENST00000560213.1_1_15:99796138-99796378:+|nuORF;ENST00000558500.5_1_15:99796138-99837514:+|nuORF;LRRC28|p.S231Rfs*22|1|0.07|ENSG00000168904|chr15:99352468-99352469|-/ATGGTTAGCAAGACTGCTCAGGACTCTGT|frameshift_variant;nc|ENSG00000168904|Q86X40-2|LRRC28;ENSG00000168904|ENST00000301981|LRRC28	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.9294921755791	3	491.929844	1472.7677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.583	1	42.909	42.409	43.409	1.3254								0	0	0	0.63775	1	17433	17433		1.3296	0.63198	1				17500	4057	8324	8362	20490	20490					0.05022950228294576
LFLNYRNLHHF	11	Unmodified	_LFLNYRNLHHF_					0	0	0		ENST00000560213.1_1_15:99796138-99796378:+|nuORF;ENST00000558500.5_1_15:99796138-99837514:+|nuORF;LRRC28|p.S231Rfs*22|1|0.07|ENSG00000168904|chr15:99352468-99352469|-/ATGGTTAGCAAGACTGCTCAGGACTCTGT|frameshift_variant;nc|ENSG00000168904|Q86X40-2|LRRC28;ENSG00000168904|ENST00000301981|LRRC28	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	ENST00000560213.1_1_15:99796138-99796378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2652160525322	3	491.929844	1472.7677	2.1306	0.0010481	-0.63765	-0.00031368	1.4929	0.00073443	491.92935107572055	41.096	0.3192	42.989	42.8	43.119	1.8927					28	9	4	0	0	0	1.0156	1	17250	17250		2.8433	1.5136	1	2095900			17501	4057	8324	8362	20491	20491					0.05022950228294576
LFLPEIFII	9	Unmodified	_LFLPEIFII_					0	0	0		ENST00000570455.1_1_17:6538276-6538423:-|nuORF	ENST00000570455.1_1_17:6538276-6538423:-|nuORF	ENST00000570455.1_1_17:6538276-6538423:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8389770388603	2	552.838811	1103.66307	1.9028	0.0010519	-2.4403	-0.0013491	-0.53757	-0.00029719	552.8377212558792	54.33	0.28089	54.651	54.508	54.789	0.32088					20	8	3	0	0	0	0.03795	2	22758	22758;22809		77.984	7.2688	1	2540500			17502	7392	8325	8363	20492;20493	20492					0.11538435699048932
LFLPEIFII	9	Unmodified	_LFLPEIFII_					0	0	0		ENST00000570455.1_1_17:6538276-6538423:-|nuORF	ENST00000570455.1_1_17:6538276-6538423:-|nuORF	ENST00000570455.1_1_17:6538276-6538423:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8387328982353	2	552.838811	1103.66307	1.092	0.00060368	-1.8332	-0.0010135	-0.74121	-0.00040977	552.8377015425191	52.465	0.41659	54.437	54.257	54.674	1.9722					34	12	4	0	0	0	0.11478	1	21948	21948		44.407	7.9008	1	8493400			17503	7392	8325	8363	20494	20494					0.11538435699048932
LFLPSRKFI	9	Unmodified	_LFLPSRKFI_					0	0	0			REV__ENST00000260665.11_1_2:44209460-44209538:-|nuORF	REV__ENST00000260665.11_1_2:44209460-44209538:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2359496951103	3	374.234093	1119.68045	1.5934	0.00059631	1.212	0.00045357	2.8054	0.0010499	374.2348641249524	49.509	0.39423	49.84	49.623	50.017	0.33019					26	12	3	0	0	0	0.53525	1	20714	20714		9.544	0	1	2217500	+		17504	12177	8326	8364	20495	20495					0.1253977602470968
LFLPYSHFL	9	Unmodified	_LFLPYSHFL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8117553591728	2	568.810585	1135.60662	2.5924	0.0014746	-0.40448	-0.00023008	2.1879	0.0012445	568.8100400382993	75.497	0.40301	76.803	76.615	77.018	1.3063					38	12	4	0	0	0	0.051699	2	31708	31664;31708		67.344	9.5345	1	5357700			17505	1924	8327	8365	20496;20497	20497					0.04423807862372087
LFLPYSHFL	9	Unmodified	_LFLPYSHFL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8105956912041	2	568.810585	1135.60662	2.8016	0.0015936	-1.2345	-0.0007022	1.5671	0.00089136	568.8095420605704	74.989	0.37018	76.771	76.575	76.945	1.7817					34	11	4	0	0	0	0.09539	2	31423	31423;31473		50.855	2.5092	1	5414900			17506	1924	8327	8365	20498;20499	20498					0.04423807862372087
LFLRYWGS	8	Unmodified	_LFLRYWGS_					0	0	0			REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2817260622978	2	521.279452	1040.54435	3.2867	0.0017133	0.95486	0.00049775	4.2416	0.002211	521.2800249301479	101.86	0.11792	102.03	101.96	102.08	0.17032					5	3	2	0	0	0	0.89008	1	42865	42865		2.5775	0.92486	1	15126000	+		17507	8326	8328	8366	20500	20500					0.025700815140453415
LFLRYWGS	8	Unmodified	_LFLRYWGS_					0	0	0			REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2806884646416	2	521.279452	1040.54435	3.2249	0.0016811	-1.229	-0.00064066	1.9959	0.0010404	521.2790061653328	101.79	0.14929	101.98	101.87	102.02	0.19076					7	4	2	0	0	0	0.89008	1	42800	42800		2.5775	0	1	4816000	+		17508	8326	8328	8366	20501	20501					0.025700815140453415
LFLRYWGS	8	Unmodified	_LFLRYWGS_					0	0	0			REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	521.279452	1040.54435	3.2867	0.0017133	0.95486	0.00049775	4.2416	0.002211	521.2800249301479	101.86	0.11792	102.03	101.96	102.08	0.17032	0.02684	0.0011716	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15126000	+		17509	8326	8328	8366							0.025700815140453415
LFLRYWGS	8	Unmodified	_LFLRYWGS_					0	0	0			REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	REV__L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|346|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	521.279452	1040.54435	3.2249	0.0016811	-1.229	-0.00064066	1.9959	0.0010404	521.2790061653328	101.79	0.14929	101.98	101.87	102.02	0.19076	-0.02684	-0.0011052	NaN	2.5775	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4816000	+		17510	8326	8328	8366							0.025700815140453415
LFLTFIIHIAK	11	Unmodified	_LFLTFIIHIAK_					0	0	0			REV__ENST00000479763.5_1_2:62728346-62728628:-|nuORF	REV__ENST00000479763.5_1_2:62728346-62728628:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	658.4129516482353	2	658.410466	1314.80638	2.662	0.0017527	1.0087	0.00066412	3.6706	0.0024168	658.4113219253587	89.149	0.22287	89.149	89.083	89.306	0					12	6	2	0	0	0	1.0131	1	37271	37271		2.9952	0	1	683470	+		17511	11517	8329	8367	20502	20502					0.16156862810134953
LFLTFIIHIAK	11	Unmodified	_LFLTFIIHIAK_					0	0	0			REV__ENST00000479763.5_1_2:62728346-62728628:-|nuORF	REV__ENST00000479763.5_1_2:62728346-62728628:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	658.410466	1314.80638	2.5345	0.0016687	2.2537	0.0014839	4.7882	0.0031526	658.4123613591973	89.054	0.35415	89.278	89.036	89.39	0.22359	0.064369	0.0013455	NaN	2.9952	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789500	+		17512	11517	8329	8367							0.16156862810134953
LFLTFSVNI	9	Unmodified	_LFLTFSVNI_					0	0	0		ENST00000567224.1_1_15:53809574-53809730:-|nuORF	ENST00000567224.1_1_15:53809574-53809730:-|nuORF	ENST00000567224.1_1_15:53809574-53809730:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7996703982353	2	527.302593	1052.59063	1.8244	0.00096204	3.4042	0.0017951	5.2287	0.0027571	527.3057192467344	41.965	0.97211	43.886	43.537	44.509	1.9211					57	30	3	0	0	0	0.54523	1	17501	17501		13.508	0	1	2926000			17513	7364	8330	8368	20503	20503					0.06644101625465737
LFLVDIIIF	9	Unmodified	_LFLVDIIIF_					0	0	0		tr|A0A7D6ZII5|A0A7D6ZII5_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04435PE=3SV=1	tr|A0A7D6ZII5|A0A7D6ZII5_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04435PE=3SV=1	tr|A0A7D6ZII5|A0A7D6ZII5_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04435PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8417846560478	2	546.838811	1091.66307	2.5662	0.0014033	1.9787	0.001082	4.5449	0.0024853	546.8398729290499	86.077	0.69292	86.33	86.006	86.699	0.25227					81	22	5	0	0	0	0.82604	1	36086	36086		2.3027	0	1	143730000			17514	17102	8331	8369	20504	20504					0.12090435699042246
LFLVKGGIF	9	Unmodified	_LFLVKGGIF_					0	0	0		ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.3115722537041	2	497.310221	992.605889	2.6975	0.0013415	0.53386	0.00026549	3.2314	0.001607	497.31091212826857	69.941	0.28134	71.295	71.147	71.429	1.3536					18	8	3	0	0	0	0.12174	1	29363	29363		42.095	6.0504	1	1006400			17515	5260	8332	8370	20505	20505					0.10929013213331018
LFLVKGGIF	9	Unmodified	_LFLVKGGIF_					0	0	0		ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.3110839724541	2	497.310221	992.605889	2.0063	0.00099776	-0.51631	-0.00025677	1.49	0.00074099	497.3102711856091	69.437	0.31635	71.29	71.103	71.419	1.853					15	9	2	0	0	0	0.24063	1	29115	29115		28.487	2.1456	1	965500			17516	5260	8332	8370	20506	20506					0.10929013213331018
LFLYKFCL	8	Unmodified	_LFLYKFCL_					0	0	0		Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	Harlequin-int_dup205|chr5:139527356-139527823:+|1.396815432304557|0.0536703186443687|4.7|413.0|41|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7925903201103	2	523.790807	1045.56706	4.1334	0.0021651	0.89081	0.0004666	5.0243	0.0026317	523.7913484329649	90.153	0.31023	91.557	91.304	91.614	1.4045					15	9	2	0	0	0	0.87803	1	37976	37976		10.183	0	1	563950			17517	7604	8333	8371	20507	20507					0.046099645872800465
LFMFDWYKEWK	11	Unmodified	_LFMFDWYKEWK_					0	0	0		TP53TG5|p.E125_Y126insFNSLFMFDW|1|0.03|ENSG00000124251|chr20:45375432-45375433|-/CAATCAAACATAAATAGAGAGTTGAAT|inframe_insertion	TP53TG5|p.E125_Y126insFNSLFMFDW|1|0.03|ENSG00000124251|chr20:45375432-45375433|-/CAATCAAACATAAATAGAGAGTTGAAT|inframe_insertion	TP53TG5|p.E125_Y126insFNSLFMFDW|1|0.03|ENSG00000124251|chr20:45375432-45375433|-/CAATCAAACATAAATAGAGAGTTGAAT|inframe_insertion	MSMS	GG20161007_CRH_Patient100_A02_02	2	796.7994262576103	2	796.883955	1591.75336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.325	1	95.449	94.949	95.949	0.12331								0	0	0	0.63775	1	39890	39890		3.2813	1.7994	1				17518	16033	8334	8372	20508	20508					-0.01884883034881568
LFMFFFLI	8	Unmodified	_LFMFFFLI_					0	0	0		ENST00000295754.9_1_3:30735309-30735375:+|nuORF	ENST00000295754.9_1_3:30735309-30735375:+|nuORF	ENST00000295754.9_1_3:30735309-30735375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2916137576103	2	539.295725	1076.5769	2.4557	0.0013243	-1.6566	-0.00089341	0.79908	0.00043094	539.2942857284337	40.627	0.55473	41.941	41.581	42.135	1.3138					36	17	3	0	0	0	0.76629	1	16957	16957		24.21	6.075	1	2854300			17519	5731	8335	8373	20509	20509					0.04167152592685852
LFNFCWTL	8	Unmodified	_LFNFCWTL_					0	0	0		nc|ENSG00000080839|P28749-2|RBL1;ENSG00000080839|ENST00000373664|RBL1	nc|ENSG00000080839|P28749-2|RBL1	nc|ENSG00000080839|P28749-2|RBL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2560912966728	2	522.254588	1042.49462	2.6008	0.0013583	-0.89932	-0.00046968	1.7015	0.00088862	522.2547000001283	65.651	0.58203	67.05	66.817	67.399	1.3989					30	18	2	0	0	0	0.37084	1	27493	27493		60.39	2.9182	1	6521100			17520	1011	8336	8374	20510	20510					-0.024923694862764023
LFNKGGKKEV	10	Unmodified	_LFNKGGKKEV_					0	0	0			REV__ENST00000226091.2_1_17:7613862-7613994:+|nuORF	REV__ENST00000226091.2_1_17:7613862-7613994:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3312255740166	2	560.329673	1118.64479	1.8731	0.0010496	0.13714	7.6845E-05	2.0103	0.0011264	560.3292493282892	61.958	0.46838	62.288	62.012	62.48	0.32974					30	14	3	0	0	0	0.80568	1	25974	25974		11.64	0	1	992670	+		17521	12092	8337	8375	20511	20511					0.09021693777026485
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	889.5509521365166	1	889.550565	888.543289	1.1526	0.0010253	-0.44825	-0.00039874	0.70434	0.00062655	889.5496421766729	106.22	0.13104	106.22	106.15	106.28	0					16	6	3	0	0	0	0.89198	1	45279	45279		0	0	1	42501000	+		17522	15255	8338	8376	20512	20512					0.09455867145106822
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	889.5505859255791	1	889.550565	888.543289	2.8075	0.0024974	-1.9624	-0.0017457	0.84509	0.00075175	889.5484787105657	106.18	0.13769	106.24	106.17	106.31	0.05455					15	6	3	0	0	0	0.89198	1	45185	45185		0	0	1	37029000	+		17523	15255	8338	8376	20513	20513					0.09455867145106822
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	889.550565	888.543289	1.1526	0.0010253	-0.44825	-0.00039874	0.70434	0.00062655	889.5496421766729	106.22	0.13104	106.22	106.15	106.28	0	-0.04654	0.0017712	NaN	0	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42501000	+		17524	15255	8338	8376							0.09455867145106822
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	889.550565	888.543289	2.8075	0.0024974	-1.9624	-0.0017457	0.84509	0.00075175	889.5484787105657	106.18	0.13769	106.24	106.17	106.31	0.05455	-0.02903	0.00042427	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37029000	+		17525	15255	8338	8376							0.09455867145106822
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	889.550565	888.543289	2.9758	0.0026471	-3.2688	-0.0029077	-0.29295	-0.00026059	889.5472430075345	106.15	0.18124	106.31	106.23	106.41	0.15781	0.042622	-0.0007378	NaN	0	24	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	96870000	+		17526	15255	8338	8376							0.09455867145106822
LFNKIALA	8	Unmodified	_LFNKIALA_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	889.550565	888.543289	3.1067	0.0027636	-4.0382	-0.0035922	-0.93153	-0.00082864	889.5464502175025	106.14	0.17754	106.3	106.2	106.38	0.16174	0.032948	-0.0014223	NaN	0	25	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102620000	+		17527	15255	8338	8376							0.09455867145106822
LFNKIAMRP	9	Unmodified	_LFNKIAMRP_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3172485232353	2	545.315512	1088.61647	1.3153	0.00071727	1.8825	0.0010265	3.1978	0.0017438	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.76456	1	29212	29212		4.756	4.756	1	2013200			17528	16072	8339	8377	20514	20514					0.07570672596102668
LFNKIAMRP	9	Unmodified	_LFNKIAMRP_					0	0	0		tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	tr|A0A553SFQ0|A0A553SFQ0_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_09205PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3176757693291	2	545.315512	1088.61647	1.2814	0.00069875	2.3056	0.0012573	3.587	0.001956	545.3170765480959	70.167	1.6732	70.489	69.344	71.017	0.32224					99	53	3	0	0	0	0.83213	1	29478	29478		2.0598	0	1	2056900			17529	16072	8339	8377	20515	20515					0.07570672596102668
LFNKIKEEL	9	Unmodified	_LFNKIKEEL_					0	0	0		tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3318969607353	2	567.331882	1132.64921	1.4037	0.00079635	-2.6697	-0.0015146	-1.266	-0.00071825	567.3302083958685	72.689	1.6753	72.689	71.636	73.312	0					116	52	3	0	0	0	0.83213	1	30081	30081		2.0598	0	1	2431800			17530	17088	8340	8378	20516	20516					0.08819158199935373
LFNKIKEEL	9	Unmodified	_LFNKIKEEL_					0	0	0		tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	tr|A0A7D6ZHP2|A0A7D6ZHP2_9CLOT4-alpha-glucanotransferaseOS=ClostridiumintestinaleOX=36845GN=malQPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3308593630791	2	567.331882	1132.64921	3.5552	0.002017	-2.9346	-0.0016649	0.62061	0.00035209	567.3299581410433	73.791	1.1302	75.109	74.4	75.53	1.318					95	35	3	0	0	0	0.83213	1	30947	30947		2.0598	0	1	4418700			17531	17088	8340	8378	20517	20517					0.08819158199935373
LFNKKGRIM	9	Unmodified	_LFNKKGRIM_					0	0	0			REV__ENST00000556925.5_1_14:50264161-50281481:-|nuORF	REV__ENST00000556925.5_1_14:50264161-50281481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8325683474541	2	553.828786	1105.64302	3.3858	0.0018751	2.5227	0.0013971	5.9085	0.0032723	553.8297129525997	72.969	1.2218	74.299	74.069	75.29	1.3297					58	38	3	0	0	0	0.83213	1	30689	30689		2.0598	0	1	1864000	+		17532	10785	8341	8379	20518	20518					0.09442361487435846
LFNLFWTW	8	Unmodified	_LFNLFWTW_					0	0	0		ENST00000434667.3_2_21:33074580-33074655:-|nuORF	ENST00000434667.3_2_21:33074580-33074655:-|nuORF	ENST00000434667.3_2_21:33074580-33074655:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7891723513603	2	563.789653	1125.56475	3.5414	0.0019966	-2.7425	-0.0015462	0.79883	0.00045037	563.7875760442746	81.565	0.40242	82.798	82.564	82.966	1.2332					29	12	3	0	0	0	0.86202	1	34213	34213		15.768	6.4208	1	2536400			17533	6521	8342	8380	20519	20519					0.006992521738538926
LFNLLYSTF	9	Unmodified	_LFNLLYSTF_					0	0	0		ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3003417849541	2	559.30005	1116.58555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.808	1	63.138	62.638	63.638	0.32974								0	0	0	0.3709	1	26315	26315		11.64	0	1				17534	92	8343	8381	20520	20520					0.03191797762860915
LFNQEPGRL	9	Unmodified	_LFNQEPGRL_					0	0	0		ENSG00000163328|ENST00000392552|GPR155	ENSG00000163328|ENST00000392552|GPR155	ENSG00000163328|ENST00000392552|GPR155	MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2933837771416	2	537.290548	1072.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.145	1	86.304	85.804	86.804	1.159								0	0	0	0.317	1	35729	35729		16.942	0	1				17535	3670	8344	8382	20521	20521					0.033162611917987306
LFNRLVPSV	9	Unmodified	_LFNRLVPSV_					0	0	0		MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant;ENSG00000100714|ENST00000652337|MTHFD1;MTHFD1-CASK|3|fusion;MTHFD1-CASK|2|fusion;MTHFD1-CASK|1|fusion;ENST00000555252.5_1_14:64855058-64907131:+|nuORF	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MTHFD1|p.P917Afs*5|1|0.07|ENSG00000100714|chr14:64458242-64458243|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.3290283083916	2	522.813659	1043.61277	2.1402	0.0011189	-2.781	-0.0014539	-0.64081	-0.00033503	522.8118640208417	78.837	0.34022	80.572	80.382	80.722	1.735					14	10	2	0	0	0	0.11645	1	32997	32997		4.756	0	1	1110100			17536	1298	8345	8383	20522	20522					0.09270326093883341
LFNVILFHALL	11	Unmodified	_LFNVILFHALL_					0	0	0		ENSG00000214654|ENST00000689072|B3GALT9	ENSG00000214654|ENST00000689072|B3GALT9	ENSG00000214654|ENST00000689072|B3GALT9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3984252810478	2	650.394816	1298.77508	2.4864	0.0016171	1.0676	0.00069437	3.554	0.0023115	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	1.0366	1	34396	34396		1.1933	0	1	5912000			17537	5243	8346	8384	20523	20523					0.13764289776031546
LFNWDLVDV	9	Unmodified	_LFNWDLVDV_					0	0	0		tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	tr|A0A7D6ZTT8|A0A7D6ZTT8_9CLOTThioredoxinreductaseOS=ClostridiumintestinaleOX=36845GN=trxBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.2511474490166	2	560.787307	1119.56006	3.6694	0.0020578	0.36681	0.0002057	4.0362	0.0022635	560.7875576120363	81.699	0.30923	82.932	82.749	83.058	1.2332					12	9	2	0	0	0	0.10844	1	34326	34326		16.942	4.4107	1	353770			17538	17144	8347	8385	20524	20524					0.005063232404154405
LFNYIKDIRK	10	Unmodified	_LFNYIKDIRK_					0	0	0			REV__tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	REV__tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3803588747978	2	655.38498	1308.75541	1.3174	0.00086339	-2.6482	-0.0017356	-1.3308	-0.00087218	655.3823486844238	79.943	1.3104	81.659	80.982	82.293	1.7167					76	42	2	0	0	0	0.89803	1	33665	33665		3.2813	0.28607	1	1872500	+		17539	15587	8348	8386	20525	20525					0.11337913765260055
LFNYIKDIRK	10	Unmodified	_LFNYIKDIRK_					0	0	0			REV__tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	REV__tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	655.38498	1308.75541	1.3174	0.00086339	-2.6482	-0.0017356	-1.3308	-0.00087218	655.3823486844238	79.943	1.3104	81.659	80.982	82.293	1.7167	0.19073	0.00034678	NaN	3.2813	76	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1872500	+		17540	15587	8348	8386							0.11337913765260055
LFPATGKH	8	Unmodified	_LFPATGKH_					0	0	0			REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7455627322197	2	435.745245	869.475937	-0.033428	-1.4566E-05	0.40987	0.0001786	0.37644	0.00016403	435.7453636589455	12.422	0.55745	12.422	12.034	12.591	0					32	17	3	0	0	0	0.7006	1	5131	5131		30.225	2.0516	1	2163500	+		17541	13676	8349	8387	20526	20526					0.0359783693419331
LFPATGKH	8	Unmodified	_LFPATGKH_					0	0	0			REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	435.745245	869.475937	-0.033428	-1.4566E-05	0.40987	0.0001786	0.37644	0.00016403	435.7453636589455	12.422	0.55745	12.422	12.034	12.591	0	-0.042372	-0.00019846	NaN	30.225	32	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2163500	+		17542	13676	8349	8387							0.0359783693419331
LFPATGKH	8	Unmodified	_LFPATGKH_					0	0	0			REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	REV__ENST00000527322.5_1_11:75154120-75168815:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	435.745245	869.475937	0.58806	0.00025625	0.86047	0.00037495	1.4485	0.00063119	435.74540726244544	12.418	0.18256	12.507	12.433	12.616	0.089381	0.042372	0.00019424	NaN	30.225	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602940	+		17543	13676	8349	8387							0.0359783693419331
LFPEFLKEL	9	Unmodified	_LFPEFLKEL_					0	0	0		ENSG00000164142|ENST00000435205|FHIP1A;PET112-FAM160A1|1|fusion	ENSG00000164142|ENST00000435205|FHIP1A	ENSG00000164142|ENST00000435205|FHIP1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3228027224541	2	568.323525	1134.6325	2.6698	0.0015173	-3.1262	-0.0017767	-0.45634	-0.00025935	568.321851525574	69.841	0.34528	71.194	70.99	71.336	1.3536					29	10	4	0	0	0	0.59203	1	29352	29352		11.64	0	1	3591500			17544	3753	8350	8388	20527	20527					0.07056657313978576
LFPIGVLFH	9	Unmodified	_LFPIGVLFH_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2065002322197	3	348.207656	1041.60114	-0.46991	-0.00016363	-3.5529	-0.0012371	-4.0228	-0.0014008	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.75267	1	12916	12916		2.9952	0	1	6459500			17545	7641	8351	8389	20528	20528					0.08200129070564799
LFPIGVLFH	9	Unmodified	_LFPIGVLFH_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|198|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2064086794853	3	348.207656	1041.60114	-0.5665	-0.00019726	-2.0005	-0.0006966	-2.567	-0.00089385	348.2068075331765	31.488	0.9053	32.769	32.375	33.28	1.2813					65	29	3	0	0	0	0.75267	1	13172	13172		2.9952	0	1	6541500			17546	7641	8351	8389	20529	20529					0.08200129070564799
LFPKLLCL	8	Unmodified	_LFPKLLCL_					0	0	0		NXF3|p.E411Gfs*9|1|0.08|ENSG00000147206|chrX:103079462-103079463|-/C|frameshift_variant;ENSG00000147206|ENST00000395065|NXF3	NXF3|p.E411Gfs*9|1|0.08|ENSG00000147206|chrX:103079462-103079463|-/C|frameshift_variant	NXF3|p.E411Gfs*9|1|0.08|ENSG00000147206|chrX:103079462-103079463|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	473.2003661990166	2	473.793349	945.572146	2.5602	0.001213	0.28796	0.00013643	2.8481	0.0013494	473.7934266033676	69.527	0.53654	71.38	71.103	71.639	1.853					24	16	2	0	0	0	2.3239	1	29226	29226		6.3541	0	1	1245800			17547	3176	8352	8390	20530	20530					0.09718268449910283
LFPKRTIP	8	Unmodified	_LFPKRTIP_					0	0	0		ENST00000229214.8_1_12:75902094-75905340:-|nuORF	ENST00000229214.8_1_12:75902094-75905340:-|nuORF	ENST00000229214.8_1_12:75902094-75905340:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2956420779228	2	486.30547	970.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.51	1	103.67	103.17	104.17	0.16445								0	0	0	1.0178	1	43649	43649		2.3027	0	1				17548	5543	8353	8391	20531	20531					0.10991244927799926
LFPSIHLLI	9	Unmodified	_LFPSIHLLI_					0	0	0			REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|8|1|sense	REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|8|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8322631716728	2	526.828778	1051.643	4.0875	0.0021534	4.2229	0.0022247	8.3104	0.0043781	526.83069441197	95.193	0.25191	95.614	95.423	95.675	0.42119					17	10	2	0	0	0	0.66839	1	40037	40037		8.5933	0	1	1263200	+		17549	8216	8354	8392	20532	20532					0.11924684759082993
LFPSIHLLI	9	Unmodified	_LFPSIHLLI_					0	0	0			REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|8|1|sense	REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|8|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8325073122978	2	526.828778	1051.643	3.3444	0.0017619	3.3917	0.0017869	6.7361	0.0035488	526.8304937410476	94.622	0.33389	95.811	95.651	95.985	1.1887					18	10	2	0	0	0	0.66839	1	39797	39797		8.5933	0	1	1214300	+		17550	8216	8354	8392	20533	20533					0.11924684759082993
LFPTPRGR	8	Unmodified	_LFPTPRGR_					0	0	0			REV__ENST00000581737.1_1_17:80202659-80207035:-|nuORF	REV__ENST00000581737.1_1_17:80202659-80207035:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2768737673759	2	472.277244	942.539935	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.101	1	67.01	66.51	67.51	1.9085								0	0	0	1.0178	1	27307	27307		2.5775	0.27475	1		+		17551	13991	8355	8393	20534	20534					0.06636617091135122
LFPVYFARLL	10	Unmodified	_LFPVYFARLL_					0	0	0			REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8699218630791	2	619.868434	1237.72232	2.1274	0.0013187	1.2699	0.00078718	3.3973	0.0021059	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	0.89803	1	31905	31905		1.6526	1.1943	1	3039400	+		17552	8862	8356	8394	20535	20535					0.11296331713219843
LFPVYFARLL	10	Unmodified	_LFPVYFARLL_					0	0	0			REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8708373904228	2	619.868434	1237.72232	2.2512	0.0013954	1.4755	0.00091463	3.7267	0.0023101	619.8686905938712	75.725	0.95156	76.047	75.742	76.694	0.32164					56	30	3	0	0	0	0.89803	1	31663	31663		1.8442	0.36234	1	1023400	+		17553	8862	8356	8394	20536	20536					0.11296331713219843
LFPVYFARLL	10	Unmodified	_LFPVYFARLL_					0	0	0			REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	REV__nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8704711794853	2	619.868434	1237.72232	2.39	0.0014815	1.5081	0.00093483	3.8981	0.0024163	619.8694342335624	75.861	1.5064	77.628	76.716	78.222	1.7672					104	48	3	0	0	0	0.89803	1	31703	31703		1.8442	0.19162	1	2322400	+		17554	8862	8356	8394	20537	20537					0.11296331713219843
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6091491580009	3	480.60877	1438.80448	1.7102	0.00082193	-1.3923	-0.00066917	0.31784	0.00015276	480.6081369502685	34.968	1.0198	34.968	34.28	35.299	0					147	46	5	0	0	0	0.46792	8	14596	14458;14510;14557;14596;14635;14674;14721;14761		24.957	15.713	1	15911000			17555	2112	8357	8395	20538;20539;20540;20541;20542;20543;20544;20545	20541					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.9440490603447	3	480.60877	1438.80448	1.7379	0.00083524	-1.0724	-0.00051539	0.66551	0.00031985	480.60828022662105	35.484	0.52521	35.484	35.322	35.847	0					60	42	2	0	0	0	0.46792	3	14858	14858;14939;15028		24.957	12.084	1	11681000			17556	2112	8357	8395	20546;20547;20548	20546					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6101257205009	3	480.60877	1438.80448	1.75	0.00084108	-0.68317	-0.00032834	1.0669	0.00051274	480.60833819816366	35.918	0.15046	35.918	35.847	35.998	0					31	11	3	0	0	0	0.7432	1	15062	15062		17.049	4.8738	1	6453600			17557	2112	8357	8395	20549	20549					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6096069216728	3	480.60877	1438.80448	1.7854	0.00085807	-1.2155	-0.00058416	0.56992	0.00027391	480.60825013690237	36.734	0.54537	36.734	36.576	37.121	0					64	29	3	0	0	0	0.94603	1	15399	15399		7.0371	0.80273	1	3121900			17558	2112	8357	8395	20550	20550					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6096069216728	3	480.60877	1438.80448	1.8299	0.00087947	-1.3543	-0.00065088	0.47562	0.00022859	480.60825941691104	38.11	1.1014	38.11	37.288	38.389	0					67	40	2	0	0	0	0.98969	1	15937	15937		4.4062	1.9714	1	2138900			17559	2112	8357	8395	20551	20551					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.9441406130791	3	480.60877	1438.80448	1.9168	0.00092125	0.54306	0.000261	2.4599	0.0011822	480.9433148492038	39.01	3.7712	39.01	38.582	42.353	0					205	123	2	0	0	0	0.90941	5	16216	16216;16725;16844;16900;16953		9.2438	2.2067	1	2342100			17560	2112	8357	8395	20552;20553;20554;20555;20556	20552					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6082946658134	3	480.60877	1438.80448	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.734	1	35.734	35.234	36.234	0								0	0	0	0.52149	1	14980	14980		24.957	7.0939	1				17561	2112	8357	8395	20557	20557					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.6098205447197	3	480.60877	1438.80448	2.1623	0.0010392	-0.50721	-0.00024377	1.6551	0.00079545	480.6084205850509	34.1	1.3423	34.397	33.885	35.227	0.29701					146	53	4	0	0	0	0.57783	5	14261	14212;14261;14356;14404;14494		21.799	14.322	1	5674800			17562	2112	8357	8395	20558;20559;20560;20561;20562	20559					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.6079894900322	3	480.60877	1438.80448	0.65967	0.00031704	0.072915	3.5043E-05	0.73259	0.00035209	480.60861045498785	32.792	0.79708	34.07	33.67	34.467	1.2782					71	28	4	0	0	0	0.82685	2	13828	13778;13828		14.218	3.9029	1	4122800			17563	2112	8357	8395	20563;20564	20564					0.10263202054215981
LFQEREHVLRL	11	Unmodified	_LFQEREHVLRL_					0	0	0		nc|ENSG00000120647|Q9BR77-2|CCDC77;ENSG00000120647|ENST00000239830|CCDC77;ENST00000538160.1_1_12:514707-527878:+|nuORF;ENST00000540344.5_1_12:498593-542579:+|nuORF	nc|ENSG00000120647|Q9BR77-2|CCDC77	nc|ENSG00000120647|Q9BR77-2|CCDC77	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.6094543337822	3	480.60877	1438.80448	0.74813	0.00035956	0.54518	0.00026202	1.2933	0.00062157	480.6088120683258	32.142	0.83586	33.967	33.641	34.477	1.8246					71	29	3	0	0	0	0.94603	1	13498	13498		7.0371	0.80273	1	2518800			17564	2112	8357	8395	20565	20565					0.10263202054215981
LFQIDLFIRK	10	Unmodified	_LFQIDLFIRK_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MSMS	GG20161007_CRH_Patient100_W632_01	3	646.8881713747978	2	646.889898	1291.76524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.718	1	14.445	13.945	14.945	0.72639								0	0	0	0.66176	1	5697	5697		1.4819	0	1		+		17565	8965	8358	8396	20566	20566					0.13103101770616377
LFQKSGELI	9	Unmodified	_LFQKSGELI_					0	0	0			REV__ENSG00000068097|ENST00000184956|HEATR6	REV__ENSG00000068097|ENST00000184956|HEATR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7991821169853	2	517.797675	1033.5808	2.7506	0.0014243	-1.5491	-0.00080212	1.2015	0.00062215	517.7963001283726	63.978	0.62592	65.385	65.207	65.833	1.4071					37	19	3	0	0	0	0.045797	1	26834	26834		71.134	7.1731	1	5621500	+		17566	8699	8359	8397	20567	20567					0.06534913620112093
LFQKSGELI	9	Unmodified	_LFQKSGELI_					0	0	0			REV__ENSG00000068097|ENST00000184956|HEATR6	REV__ENSG00000068097|ENST00000184956|HEATR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7986328005791	2	517.797675	1033.5808	2.793	0.0014462	-2.1673	-0.0011222	0.62568	0.00032397	517.7961056593324	63.479	0.69031	65.423	65.183	65.874	1.9444					40	21	3	0	0	0	0.045797	1	26614	26614		71.134	4.6769	1	5562700	+		17567	8699	8359	8397	20568	20568					0.06534913620112093
LFQLPGDKK	9	Unmodified	_LFQLPGDKK_					0	0	0			REV__BLVRA|p.E139Dfs*12|1|0.1|ENSG00000106605|chr7:43800528-43800529|-/TGGCCCACTGCAATTTCTGCCTCCCAGGTTCT|frameshift_variant	REV__BLVRA|p.E139Dfs*12|1|0.1|ENSG00000106605|chr7:43800528-43800529|-/TGGCCCACTGCAATTTCTGCCTCCCAGGTTCT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3049194216728	2	523.305667	1044.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.335	1	67.657	67.157	68.157	0.32269								0	0	0	0.42693	1	28192	28192		2.0598	0	1		+		17568	8166	8360	8398	20569	20569					0.07626619856978323
LFQSTIKDGT	10	Unmodified	_LFQSTIKDGT_					0	0	0		nc|ENSG00000133958|Q9P2D8-2|UNC79;nc|ENSG00000133958|Q9P2D8|UNC79;nc|ENSG00000133958|Q9P2D8-3|UNC79;ENSG00000133958|ENST00000695012|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	nc|ENSG00000133958|Q9P2D8-2|UNC79	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2957641482353	2	555.295496	1108.57644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.146	1	57.114	56.614	57.614	1.9684								0	0	0	0.65378	1	23122	23122		10.824	0	1				17569	2587	8361	8399	20570	20570					0.026494044065202615
LFQTLQVL	8	Unmodified	_LFQTLQVL_					0	0	0		SLC22A11|p.G161Rfs*126|1|0.05|ENSG00000168065|chr11:64559221-64559222|-/C|frameshift_variant;nc|ENSG00000168065|Q9NSA0-2|SLC22A11;ENSG00000168065|ENST00000301891|SLC22A11	SLC22A11|p.G161Rfs*126|1|0.05|ENSG00000168065|chr11:64559221-64559222|-/C|frameshift_variant	SLC22A11|p.G161Rfs*126|1|0.05|ENSG00000168065|chr11:64559221-64559222|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2910949587822	2	481.289485	960.564418	2.1274	0.0010239	1.1886	0.00057205	3.316	0.0015959	481.2898906236697	66.044	0.88332	67.443	67.184	68.068	1.3989					48	28	2	0	0	0	0.87106	1	27765	27765		14.582	0	1	2031400			17570	4013	8362	8400	20571	20571					0.08255832453994572
LFQWRWWRVQW	11	Unmodified	_LFQWRWWRVQW_					0	0	0		L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|193|1|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|193|1|anti-sense	L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|193|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	845.9958373904228	2	845.941319	1689.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.063	1	94.804	94.304	95.304	0.74124								0	0	0	0.63775	1	39579	39579		1.4819	1.4819	1				17571	7775	8363	8401	20572	20572					0.05074607281949284
LFRGHRSA	8	Unmodified	_LFRGHRSA_					0	0	0		ENST00000495191.5_1_6:32116492-32118763:-|nuORF;ENST00000211413.9_1_6:32116492-32119704:-|nuORF	ENST00000495191.5_1_6:32116492-32118763:-|nuORF	ENST00000495191.5_1_6:32116492-32118763:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1783630251884	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.897	1	87.897	87.397	88.397	0								0	0	0	1.0178	1	36741	36741		1.4819	0	1				17572	5513	8364	8402	20573	20573					0.041225622885463054
LFRKHHWRDVR	11	Unmodified	_LFRKHHWRDVR_					0	0	0		nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3;ENST00000590181.5_1_17:33310024-33316690:+|nuORF	nc|ENSG00000005156|P49916-2|LIG3	nc|ENSG00000005156|P49916-2|LIG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2939941287041	3	517.291887	1548.85383	2.0636	0.0010675	0.71613	0.00037045	2.7797	0.0014379	517.2915899410583	43.161	3.6025	43.161	42.88	46.482	0					255	114	3	0	0	0	1.0357	1	18152	18152		1.4551	0	1	9258100			17573	481	8365	8403	20574	20574					0.10135954853672047
LFRKHHWRDVR	11	Unmodified	_LFRKHHWRDVR_					0	0	0		nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3;ENST00000590181.5_1_17:33310024-33316690:+|nuORF	nc|ENSG00000005156|P49916-2|LIG3	nc|ENSG00000005156|P49916-2|LIG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2924682497978	3	517.291887	1548.85383	2.0814	0.0010767	-0.28795	-0.00014895	1.7935	0.00092776	517.2913100871673	41.243	4.5859	43.135	41.986	46.572	1.8927					387	147	4	0	0	0	1.0388	1	16967	16967		0.50596	0	1	11438000			17574	481	8365	8403	20575	20575					0.10135954853672047
LFRNSLLSI	9	Unmodified	_LFRNSLLSI_					0	0	0			REV__tr|A0A7D6VWD4|A0A7D6VWD4_9CLOTHEATrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07970PE=4SV=1	REV__tr|A0A7D6VWD4|A0A7D6VWD4_9CLOTHEATrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07970PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8198119997978	2	531.818941	1061.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.719	1	71.073	70.573	71.573	1.3536								0	0	0	0.42693	1	29264	29264		4.756	0	1		+		17575	15540	8366	8404	20576	20576					0.09498308748334239
LFRPCTHGLL	10	Unmodified	_LFRPCTHGLL_					0	0	0			REV__nc|ENSG00000158488|P15812-13|CD1E	REV__nc|ENSG00000158488|P15812-13|CD1E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.8187744021416	2	578.818418	1155.62228	2.5379	0.001469	-3.3433	-0.0019351	-0.80532	-0.00046614	578.8164466914308	91.58	0.355	91.771	91.562	91.917	0.19042					24	10	3	0	0	0	0.85124	1	38328	38328		6.7232	2.3939	1	1017500	+		17576	10557	8367	8405	20577	20577					0.05069771107764609
LFRRLFFPR	9	Unmodified	_LFRRLFFPR_					0	0	0		sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1;sp|F5HHT4|UL17_HCMVMProteinUL17OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL17PE=3SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9210693240166	3	417.92062	1250.74003	0.32651	0.00013646	1.4049	0.00058716	1.7315	0.00072361	417.9209811518805	31.755	0.38345	31.755	31.565	31.949	0					26	11	3	0	0	0	0.83213	1	13319	13319		1.0715	0.3738	1	2220900			17577	15986	8368	8406	20578	20578					0.12469091758725881
LFRRLFFPR	9	Unmodified	_LFRRLFFPR_					0	0	0		sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1;sp|F5HHT4|UL17_HCMVMProteinUL17OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL17PE=3SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9208862185478	3	417.92062	1250.74003	0.82471	0.00034466	-0.19535	-8.164E-05	0.62936	0.00026302	417.9203457843145	28.894	0.45672	30.176	29.855	30.312	1.2825					48	14	4	0	0	0	0.77526	1	12084	12084		2.4985	0.75621	1	7286900			17578	15986	8368	8406	20579	20579					0.12469091758725881
LFRRLFFPR	9	Unmodified	_LFRRLFFPR_					0	0	0		sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1;sp|F5HHT4|UL17_HCMVMProteinUL17OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL17PE=3SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	sp|P16722|UL17_HCMVAUncharacterizedproteinUL17OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL17PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	417.92062	1250.74003	1.379	0.0005763	0.1348	5.6337E-05	1.5138	0.00063264	417.9204817891562	30.082	0.47583	30.367	30.054	30.53	0.2859	0.047289	-0.00057797	NaN	2.4985	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7786400			17579	15986	8368	8406							0.12469091758725881
LFRVSWLRPSW	11	Unmodified	_LFRVSWLRPSW_					0	0	0			REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	REV__ENST00000532486.5_1_8:144774355-144776697:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	723.6688110232353	2	723.903871	1445.79319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.541	1	93.868	93.368	94.368	1.3269								0	0	0	0.63775	1	38950	38950		2.7352	1.2533	1		+		17580	13722	8369	8407	20580	20580					0.08812424750726677
LFRVVGFG	8	Unmodified	_LFRVVGFG_					0	0	0			REV__tr|A0A553SPA8|A0A553SPA8_NIACISporulationintegralmembraneproteinYlbJOS=NialliacirculansOX=1397GN=ylbJPE=4SV=1	REV__tr|A0A553SPA8|A0A553SPA8_NIACISporulationintegralmembraneproteinYlbJOS=NialliacirculansOX=1397GN=ylbJPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	447.7670471072197	2	447.763438	893.512323	2.735	0.0012246	1.7805	0.00079726	4.5155	0.0020219	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89176	1	30583	30583		0.79363	0	1	26597000	+		17581	15080	8370	8408	20581	20581					0.061307138309075526
LFRWQRRR	8	Unmodified	_LFRWQRRR_					0	0	0			REV__ENST00000552421.5_1_14:75230214-75230343:+|nuORF	REV__ENST00000552421.5_1_14:75230214-75230343:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	610.1857177615166	2	609.359965	1216.70538	2.3304	0.0014201	1.6543	0.001008	3.9847	0.0024281	609.3604137835351	58.894	0.18999	58.894	58.784	58.974	0					9	5	2	0	0	0	2.3239	1	24542	24542		5.7604	0	1	457110	+		17582	13838	8371	8409	20582	20582					0.10569268670633392
LFRWQRRR	8	Unmodified	_LFRWQRRR_					0	0	0			REV__ENST00000552421.5_1_14:75230214-75230343:+|nuORF	REV__ENST00000552421.5_1_14:75230214-75230343:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	609.359965	1216.70538	2.347	0.0014302	1.9831	0.0012084	4.3302	0.0026386	609.8621729056233	58.406	0.18868	58.729	58.587	58.776	0.32298	-0.082719	0.00018403	NaN	5.7604	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621030	+		17583	13838	8371	8409							0.10569268670633392
LFRYQRRSRRP	11	Unmodified	_LFRYQRRSRRP_					0	0	0			REV__ENST00000261973.11_1_14:73525348-73538344:+|nuORF	REV__ENST00000261973.11_1_14:73525348-73538344:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	767.9454223513603	2	767.944924	1533.8753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.351	1	95.753	95.253	96.253	0.40208								0	0	0	0.63775	1	40118	40118		3.2813	0	1		+		17584	12190	8372	8410	20583	20583					0.12971339882369648
LFSALHREV	9	Unmodified	_LFSALHREV_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;ENSG00000132793|ENST00000373257|LPIN3;nc|ENSG00000132793|Q9BQK8-2|LPIN3	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3046752810478	2	536.300916	1070.58728	3.6074	0.0019347	3.6207	0.0019418	7.2281	0.0038764	536.3029081834668	74.008	0.65334	75.326	74.998	75.651	1.318					55	20	4	0	0	0	0.12251	1	31033	31033		41.84	1.8823	1	10845000			17585	2610	8373	8411	20584	20584					0.054808515714512396
LFSAVERRR	9	Unmodified	_LFSAVERRR_					0	0	0		ENST00000600898.1_1_19:35769575-35770156:+|nuORF;ENST00000594264.1_1_19:35769575-35770156:+|nuORF	ENST00000600898.1_1_19:35769575-35770156:+|nuORF	ENST00000600898.1_1_19:35769575-35770156:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3308593630791	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.83213	2	31131	31131;31233		2.0598	2.0598	1	6327800			17586	7507	8374	8412	20585;20586	20585					0.08550747585650242
LFSEYVLFS	9	Unmodified	_LFSEYVLFS_					0	0	0			REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.563647449017	1	1104.56119	1103.55391	5.5328	0.0061113	-2.2102	-0.0024413	3.3226	0.00367	1104.5588054241466	88.797	0.32318	89.854	89.659	89.982	1.0562					19	9	3	0	0	0	0.22519	1	37444	37444		30.225	5.5509	1	1356800	+		17587	8645	8375	8413	20587	20587					0.006278050088894815
LFSEYVLFS	9	Unmodified	_LFSEYVLFS_					0	0	0			REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1104.557299792767	1	1104.56119	1103.55391	4.7555	0.0052527	-4.0238	-0.0044446	0.73164	0.00080814	1104.5567523782997	88.363	0.28528	89.81	89.636	89.921	1.4467					13	8	2	0	0	0	0.34572	1	37211	37211		23.148	1.4018	1	1576200	+		17588	8645	8375	8413	20588	20588					0.006278050088894815
LFSEYVLFS	9	Unmodified	_LFSEYVLFS_					0	0	0			REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1104.56119	1103.55391	5.5328	0.0061113	-2.2102	-0.0024413	3.3226	0.00367	1104.5588054241466	88.797	0.32318	89.854	89.659	89.982	1.0562	0.022041	0.00089685	NaN	30.225	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1356800	+		17589	8645	8375	8413							0.006278050088894815
LFSEYVLFS	9	Unmodified	_LFSEYVLFS_					0	0	0			REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1104.56119	1103.55391	4.7555	0.0052527	-4.0238	-0.0044446	0.73164	0.00080814	1104.5567523782997	88.363	0.28528	89.81	89.636	89.921	1.4467	-0.022041	-0.0011064	NaN	30.225	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1576200	+		17590	8645	8375	8413							0.006278050088894815
LFSGISFLLL	10	Unmodified	_LFSGISFLLL_					0	0	0		L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3308593630791	2	555.333893	1108.65323	3.626	0.0020136	-3.122	-0.0017338	0.50399	0.00027988	555.3324148967661	81.809	0.33975	83.022	82.822	83.162	1.2125					23	10	3	0	0	0	0.20516	1	34328	34328		48.346	4.5735	1	1687400			17591	7717	8376	8414	20589	20589					0.10325247693663187
LFSGISFLLL	10	Unmodified	_LFSGISFLLL_					0	0	0		L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	L1MEd_dup8982|chr6:160099964-160100724:+|2.2579659231395626|0.0849947119753676|4.73|429.0|56|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3325683474541	2	555.333893	1108.65323	3.2845	0.001824	-4.4668	-0.0024806	-1.1824	-0.00065661	555.3330289028639	81.319	0.24474	83.015	82.892	83.136	1.6959					12	7	2	0	0	0	0.22411	1	34105	34105		46.021	7.8454	1	1681600			17592	7717	8376	8414	20590	20590					0.10325247693663187
LFSPYLDVL	9	Unmodified	_LFSPYLDVL_					0	0	0			REV__ENSG00000131389|ENST00000622186|SLC6A6	REV__ENSG00000131389|ENST00000622186|SLC6A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1066.592089831829	1	1066.58192	1065.57465	3.9214	0.0041825	0.54125	0.00057728	4.4626	0.0047598	1066.5819733072915	81.362	0.36592	83.058	82.829	83.195	1.6959					17	11	2	0	0	0	0.12174	1	34091	34091		42.095	6.0504	1	6949400	+		17593	9819	8377	8415	20591	20591					0.044483953885674055
LFSRGLELA	9	Unmodified	_LFSRGLELA_					0	0	0		ENST00000395136.6_2_1:70687096-70687432:+|nuORF	ENST00000395136.6_2_1:70687096-70687432:+|nuORF	ENST00000395136.6_2_1:70687096-70687432:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2941467165947	2	503.290017	1004.56548	3.1355	0.0015781	3.508	0.0017655	6.6435	0.0033436	503.292574074481	80.977	0.51875	82.21	81.953	82.471	1.2332					40	16	4	0	0	0	0.68551	1	33997	33997		7.9102	0	1	11241000			17594	6288	8378	8416	20592	20592					0.0633804682288428
LFSRGLELA	9	Unmodified	_LFSRGLELA_					0	0	0		ENST00000395136.6_2_1:70687096-70687432:+|nuORF	ENST00000395136.6_2_1:70687096-70687432:+|nuORF	ENST00000395136.6_2_1:70687096-70687432:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	503.290017	1004.56548	2.0944	0.0010541	4.2095	0.0021186	6.3039	0.0031727	503.2919555970041	81.842	0.30673	81.842	81.701	82.008	0	-0.26166	7.3952E-05	NaN	7.9102	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9714900			17595	6288	8378	8416							0.0633804682288428
LFSSWTGLFI	10	Unmodified	_LFSSWTGLFI_					0	0	0		ENST00000522621.1_2_8:62044343-62212351:+|nuORF	ENST00000522621.1_2_8:62044343-62212351:+|nuORF	ENST00000522621.1_2_8:62044343-62212351:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.8146850466728	2	585.813325	1169.6121	2.5404	0.0014882	-1.4669	-0.00085931	1.0736	0.00062891	585.8116762512936	84.752	0.22392	84.752	84.653	84.877	0					9	6	2	0	0	0	0.84024	1	35306	35306		7.9102	0	1	500620			17596	7094	8379	8417	20593	20593					0.03407486654191416
LFSVATVLS	9	Unmodified	_LFSVATVLS_					0	0	0		chr20:44749925-44750129|177|11.77|0.04|8.27|+|2|TE_info:L1ME1,L1ME1_dup29868,L1,LINE,donor,-,44749553,44749925|None,KCNK15|4	chr20:44749925-44750129|177|11.77|0.04|8.27|+|2|TE_info:L1ME1,L1ME1_dup29868,L1,LINE,donor,-,44749553,44749925|None,KCNK15|4	chr20:44749925-44750129|177|11.77|0.04|8.27|+|2|TE_info:L1ME1,L1ME1_dup29868,L1,LINE,donor,-,44749553,44749925|None,KCNK15|4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	936.5391723513603	1	936.54006	935.532783	3.0604	0.0028662	0.56601	0.00053009	3.6264	0.0033963	936.5399301840351	81.077	0.37446	82.773	82.578	82.953	1.6959					21	11	3	0	0	0	0.031324	1	34039	34039		85.357	3.7437	1	3054800			17597	248	8380	8418	20594	20594					0.06243839700039189
LFTIYVPSQF	10	Unmodified	_LFTIYVPSQF_					0	0	0			REV__tr|A0A553SUK9|A0A553SUK9_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_00840PE=4SV=1	REV__tr|A0A553SUK9|A0A553SUK9_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_00840PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2110473513603	2	607.826432	1213.63831	2.1454	0.001304	-3.1308	-0.001903	-0.98544	-0.00059897	607.8243630049202	74.113	0.35075	74.113	73.983	74.334	0					15	10	2	0	0	0	0.12555	1	30926	30926		0.40072	0	1	380540	+		17598	15294	8381	8419	20595	20595					0.04003755825669941
LFTSYCNLF	9	Unmodified	_LFTSYCNLF_					0	0	0			REV__ENST00000274311.2_1_5:52097677-52097773:+|nuORF	REV__ENST00000274311.2_1_5:52097677-52097773:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.3455688357353	2	554.26261	1106.51067	1.6834	0.00093306	-0.8423	-0.00046685	0.84112	0.0004662	554.2615671695502	67.634	0.37461	69.504	69.268	69.643	1.87					17	11	2	0	0	0	0.11333	1	28293	28293		8.5933	0	1	2197400	+		17599	12242	8382	8420	20596	20596					-0.03832708040044963
LFVIIRNNRRN	11	Unmodified	_LFVIIRNNRRN_					0	0	0			REV__tr|A0A7D6W3R7|A0A7D6W3R7_9CLOTNucleoside/nucleotidekinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10940PE=4SV=1	REV__tr|A0A7D6W3R7|A0A7D6W3R7_9CLOTNucleoside/nucleotidekinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10940PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.9230834841728	2	707.923126	1413.8317	2.6709	0.0018908	-1.3036	-0.00092286	1.3673	0.00096797	707.9211849255861	85.084	1.3599	85.084	84.368	85.728	0					88	42	3	0	0	0	1.0393	1	35406	35406		0.35063	0	1	1400800	+		17600	15616	8383	8421	20597	20597					0.14133730385242416
LFVLASGG	8	Unmodified	_LFVLASGG_					0	0	0			REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5117370486259	2	382.221072	762.42759	0.25461	9.7316E-05	0.73998	0.00028284	0.99459	0.00038015	382.2213348462549	22.261	0.18055	23.877	23.8	23.981	1.6158					9	5	2	0	0	0	2.3239	1	9311	9311		5.2307	0	1	354010	+		17601	8433	8384	8422	20598	20598					0.03687343294291168
LFVSGERLI	9	Unmodified	_LFVSGERLI_					0	0	0		ENSG00000125430|ENST00000360954|HS3ST3B1;ENSG00000153976|ENST00000284110|HS3ST3A1;HS3ST4|p.D423Sfs*3|1|0.13|ENSG00000182601|chr16:26136139-26136175|ACCCAGATGTCATCCACAGACTGAGGAAATTCTACAA/-|frameshift_variant;ENSG00000182601|ENST00000331351|HS3ST4	ENSG00000125430|ENST00000360954|HS3ST3B1	ENSG00000125430|ENST00000360954|HS3ST3B1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.6262695193291	2	517.305667	1032.59678	2.9042	0.0015023	-1.2413	-0.00064211	1.6629	0.00086023	517.3048460145127	50.161	0.41218	51.552	51.355	51.767	1.3911					21	12	3	0	0	0	0.098208	1	20933	20933		18.146	0	1	5673900			17602	2260	8385	8423	20599	20599					0.08178619856994374
LFVVWQTWLP	10	Unmodified	_LFVVWQTWLP_					0	0	0		tr|A0A553ST96|A0A553ST96_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04445PE=4SV=1	tr|A0A553ST96|A0A553ST96_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04445PE=4SV=1	tr|A0A553ST96|A0A553ST96_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04445PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	644.3549682497978	2	644.858067	1287.70158	1.8166	0.0011715	-2.9654	-0.0019123	-1.1488	-0.0007408	644.8562957786096	63.935	0.22279	64.264	64.146	64.369	0.32899					9	6	2	0	0	0	0.12525	1	26795	26795		6.7232	0.99131	1	291670			17603	16643	8386	8424	20600	20600					0.06923741333571343
LFWEPIAI	8	Unmodified	_LFWEPIAI_					0	0	0			REV__CPXM2|p.I508Sfs*55|1|0.06|ENSG00000121898|chr10:123762127-123762127|T/-|frameshift_variant	REV__CPXM2|p.I508Sfs*55|1|0.06|ENSG00000121898|chr10:123762127-123762127|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7799255251884	2	494.778754	987.542954	2.7588	0.001365	-0.092538	-4.5786E-05	2.6663	0.0013192	494.77904099383574	81.734	0.64712	82.015	81.812	82.459	0.2802					50	20	4	0	0	0	0.88958	1	34232	34232		2.8892	0	1	15408000	+		17604	8406	8387	8425	20601	20601					0.04868447425269551
LFWFFCRF	8	Unmodified	_LFWFFCRF_					0	0	0		ENST00000300571.6_1_16:19870530-19870800:-|nuORF	ENST00000300571.6_1_16:19870530-19870800:-|nuORF	ENST00000300571.6_1_16:19870530-19870800:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	583.3352538943291	2	583.286223	1164.55789	2.8055	0.0016364	1.8753	0.0010938	4.6808	0.0027303	583.788303761398	63.903	0.1861	65.831	65.764	65.95	1.928					9	5	2	0	0	0	2.3239	1	26825	26825		10.183	1.5901	1	380810			17605	5754	8388	8426	20602	20602					-0.017803839783709918
LFWFFCRF	8	Unmodified	_LFWFFCRF_					0	0	0		ENST00000300571.6_1_16:19870530-19870800:-|nuORF	ENST00000300571.6_1_16:19870530-19870800:-|nuORF	ENST00000300571.6_1_16:19870530-19870800:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	583.286223	1164.55789	3.1124	0.0018154	3.4598	0.002018	6.5721	0.0038334	583.2891606928023	64.473	0.18403	65.881	65.77	65.954	1.4071	0.02457	0.00086745	NaN	10.183	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484860			17606	5754	8388	8426							-0.017803839783709918
LFWLRKTR	8	Unmodified	_LFWLRKTR_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3426391482353	2	560.342918	1118.67128	2.53	0.0014177	-2.1656	-0.0012135	0.3644	0.00020419	560.3415504621547	88.227	0.5611	88.461	88.228	88.789	0.23471					68	17	5	0	0	0	0.89176	1	37073	37073		0.79363	0.10326	1	57751000	+		17607	10075	8389	8427	20603	20603					0.11669427459014514
LFWLRKTR	8	Unmodified	_LFWLRKTR_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3438598513603	2	560.342918	1118.67128	4.6953	0.002631	-1.8928	-0.0010606	2.8025	0.0015704	560.3416902405552	87.544	0.59129	88.635	88.335	88.926	1.0918					62	18	5	0	0	0	0.89176	1	36987	36987		0.79363	0.10326	1	40715000	+		17608	10075	8389	8427	20604	20604					0.11669427459014514
LFYETLQPV	9	Unmodified	_LFYETLQPV_					0	0	0			REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2954589724541	2	555.297507	1108.58046	0.88918	0.00049376	-2.5476	-0.0014147	-1.6584	-0.00092091	555.2953861408938	58.068	0.34273	60.037	59.871	60.214	1.969					20	10	3	0	0	0	0.64949	1	24420	24420		9.3474	0.75416	1	4454000	+		17609	9064	8390	8428	20605	20605					0.03051493900238711
LFYEWKQRRYI	11	Unmodified	_LFYEWKQRRYI_					0	0	0		tr|A0A553SK96|A0A553SK96_NIACIStageIVsporulationproteinFBOS=NialliacirculansOX=1397GN=CEQ21_18435PE=3SV=1	tr|A0A553SK96|A0A553SK96_NIACIStageIVsporulationproteinFBOS=NialliacirculansOX=1397GN=CEQ21_18435PE=3SV=1	tr|A0A553SK96|A0A553SK96_NIACIStageIVsporulationproteinFBOS=NialliacirculansOX=1397GN=CEQ21_18435PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	801.4308349490166	2	801.432993	1600.85143	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.121	1	97.121	96.621	97.621	0								0	0	0	0.63775	1	40602	40602		1.4819	0	1				17610	16278	8391	8429	20606	20606					0.07504061605368406
LFYFDSSLLW	10	Unmodified	_LFYFDSSLLW_					0	0	0			REV__ENST00000291442.3_1_19:17342996-17343158:-|nuORF	REV__ENST00000291442.3_1_19:17342996-17343158:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8879882693291	3	430.885018	1289.63323	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.07	1	102.27	101.77	102.77	0.19076								0	0	0	0.66237	1	42923	42923		0.15932	0	1		+		17611	12281	8392	8430	20607	20607					-5.480369509314187E-06
LFYFYITAYER	11	Unmodified	_LFYFYITAYER_					0	0	0		tr|A0A553SQ68|A0A553SQ68_NIACIHDfamilyphosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_19020PE=4SV=1	tr|A0A553SQ68|A0A553SQ68_NIACIHDfamilyphosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_19020PE=4SV=1	tr|A0A553SQ68|A0A553SQ68_NIACIHDfamilyphosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_19020PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2524902224541	3	495.918611	1484.734	1.7518	0.00086874	-2.1106	-0.0010467	-0.35886	-0.00017797	495.9175398567554	46.493	0.40176	47.868	47.681	48.083	1.3751					37	12	4	0	0	0	0.57783	1	19471	19471		21.799	5.5249	1	4812100			17612	16503	8393	8431	20608	20608					0.011024839458968927
LFYGLIYRT	9	Unmodified	_LFYGLIYRT_					0	0	0			REV__ENSG00000060642|ENST00000674202|PIGV	REV__ENSG00000060642|ENST00000674202|PIGV	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.3209106326103	2	573.321317	1144.62808	1.7446	0.0010002	-3.0321	-0.0017384	-1.2875	-0.00073815	573.319822067828	93.281	0.47546	93.281	93.044	93.52	0					34	14	3	0	0	0	0.84963	1	39076	39076		0.6015	0	1	1431700	+		17613	8651	8394	8432	20609	20609					0.06155192891083061
LFYKAIVR	8	Unmodified	_LFYKAIVR_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;ENSG00000266074|ENST00000675386|BAHCC1;nc|ENSG00000266074|Q9P281|BAHCC1	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MSMS	GG20161007_CRH_Patient100_A02_01	1	505.3132202029228	2	505.313295	1008.61204	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.93	1	38.93	38.43	39.43	0								0	0	0	1.0178	1	16319	16319		2.3027	0.24298	1				17614	4596	8395	8433	20610	20610					0.10807531444845608
LFYLLLLL	8	Unmodified	_LFYLLLLL_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|95|3|anti-sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|95|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	336.2017394900322	3	336.556173	1006.64669	-1.8173	-0.00061163	1.6542	0.00055673	-0.16311	-5.4896E-05	336.55620109951576	37.736	0.44577	37.736	37.631	38.076	0					22	14	2	0	0	0	2.3239	1	15919	15919		0	0	1	1212900	+		17615	14292	8396	8434	20611	20611					0.14363354532952144
LFYLQRYNFRW	11	Unmodified	_LFYLQRYNFRW_					0	0	0			REV__ENST00000460870.1_1_1:208383501-208390355:-|nuORF	REV__ENST00000460870.1_1_1:208383501-208390355:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	803.4199706912041	2	803.419885	1604.82522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.365	1	92.731	92.231	93.231	1.366								0	0	0	0.63775	1	38473	38473		0.35063	0	1		+		17616	13191	8397	8435	20612	20612					0.04699792433871153
LFYQVAEY	8	Unmodified	_LFYQVAEY_					0	0	0		nc|ENSG00000102032|P51606-3|RENBP;ENSG00000102032|ENST00000393700|RENBP	nc|ENSG00000102032|P51606-3|RENBP	nc|ENSG00000102032|P51606-3|RENBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7578613162041	2	516.755475	1031.4964	2.5832	0.0013349	2.5176	0.001301	5.1008	0.0026358	516.7559968301725	89.603	0.15637	89.603	89.558	89.714	0					10	4	3	0	0	0	0.88409	1	37464	37464		6.3541	0	1	834740			17617	1375	8398	8436	20613	20613					-0.018090371966536622
LFYRLKWRK	9	Unmodified	_LFYRLKWRK_					0	0	0			REV__DGKK|p.N1110Cfs*6|1|0.17|ENSG00000274588|chrX:50376111-50376112|-/ACAG|frameshift_variant	REV__DGKK|p.N1110Cfs*6|1|0.17|ENSG00000274588|chrX:50376111-50376112|-/ACAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.2017394900322	4	328.202751	1308.7819	0.91284	0.0002996	-0.81388	-0.00026712	0.098968	3.2482E-05	328.2022976852947	37.526	0.48184	37.831	37.535	38.017	0.30497					62	19	4	0	0	0	0.11938	1	15667	15667		1.1933	1.1933	1	9882400	+		17618	8440	8399	8437	20614	20614					0.13985647447270821
LFYRLKWRK	9	Unmodified	_LFYRLKWRK_					0	0	0			REV__DGKK|p.N1110Cfs*6|1|0.17|ENSG00000274588|chrX:50376111-50376112|-/ACAG|frameshift_variant	REV__DGKK|p.N1110Cfs*6|1|0.17|ENSG00000274588|chrX:50376111-50376112|-/ACAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2017700076103	4	328.202751	1308.7819	-0.9198	-0.00030188	-0.62219	-0.0002042	-1.542	-0.00050608	328.2024015032017	35.144	0.44951	36.418	36.233	36.682	1.2746					95	41	3	0	0	0	0.82114	1	14788	14788		2.4985	1.1688	1	13513000	+		17619	8440	8399	8437	20615	20615					0.13985647447270821
LFYTKIFL	8	Unmodified	_LFYTKIFL_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1;ENST00000358133.5_1_1:11994791-12014648:+|nuORF	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8147460818291	2	522.810054	1043.60555	2.9012	0.0015168	4.4498	0.0023264	7.351	0.0038432	522.8122247099792	79.112	0.62644	80.379	80.003	80.63	1.2668					29	19	3	0	0	0	0.87655	1	33224	33224		11.114	1.767	1	1251200			17620	1040	8400	8438	20616	20616					0.08549593493467
LFYWIYLITL	10	Unmodified	_LFYWIYLITL_					0	0	0			REV__tr|A0A7D6ZK27|A0A7D6ZK27_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10985PE=3SV=1	REV__tr|A0A7D6ZK27|A0A7D6ZK27_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.8869506716728	2	672.88375	1343.75295	1.3707	0.00092234	1.7892	0.0012039	3.1599	0.0021263	672.884909161183	58.795	0.37696	60.213	60.003	60.38	1.4181					38	11	5	0	0	0	0.20516	1	24602	24602		48.346	0.59716	1	18429000	+		17621	15673	8401	8439	20617	20617					0.09482065307588528
LFYWIYLITL	10	Unmodified	_LFYWIYLITL_					0	0	0			REV__tr|A0A7D6ZK27|A0A7D6ZK27_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10985PE=3SV=1	REV__tr|A0A7D6ZK27|A0A7D6ZK27_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.8865844607353	2	672.88375	1343.75295	1.023	0.00068834	2.6626	0.0017916	3.6856	0.00248	672.8855777507916	58.294	0.37604	60.263	60.053	60.429	1.969					35	11	4	0	0	0	0.13671	2	24452	24408;24452		57.471	1.2943	1	18774000	+		17622	15673	8401	8439	20618;20619	20619					0.09482065307588528
LGAALLQL	8	Unmodified	_LGAALLQL_					0	0	0		ENST00000400596.2_1_13:20134155-20134623:-|nuORF;ESRRA|p.D344Vfs*59|1|0.04|ENSG00000173153|chr11:64315725-64315725|A/-|frameshift_variant;nc|ENSG00000173153|P11474-2|ESRRA;ENSG00000173153|ENST00000000442|ESRRA	ENST00000400596.2_1_13:20134155-20134623:-|nuORF	ENST00000400596.2_1_13:20134155-20134623:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7574035525322	2	399.757821	797.501089	0.23037	9.2091E-05	-1.4716	-0.00058829	-1.2413	-0.0004962	399.7572428075277	78.421	0.47212	78.421	78.157	78.629	0					37	14	3	0	0	0	0.88958	1	32637	32637		2.8892	0	1	7034800			17623	4268	8402	8440	20620	20620					0.09423891736753376
LGADRYRKL	9	Unmodified	_LGADRYRKL_					0	0	0			REV__ENST00000580251.1_1_17:8169604-8170225:+|nuORF	REV__ENST00000580251.1_1_17:8169604-8170225:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	545.7363769412041	2	546.31964	1090.62473	1.7492	0.00095562	-0.57304	-0.00031307	1.1762	0.00064256	546.3196090203824	71.768	0.31479	72.092	71.975	72.29	0.32359					15	9	2	0	0	0	0.11787	1	29999	29999		0.6015	0.14316	1	652370	+		17624	11261	8403	8441	20621	20621					0.08303942837073919
LGAELQLQQV	10	Unmodified	_LGAELQLQQV_					0	0	0			REV__nc|ENSG00000133136|A0A804HLA8|GNG5B	REV__nc|ENSG00000133136|A0A804HLA8|GNG5B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2183105349541	2	549.811313	1097.60807	1.271	0.00069879	2.7287	0.0015002	3.9996	0.002199	549.8122135126492	95.905	0.23246	95.905	95.773	96.005	0					17	7	3	0	0	0	0.12525	1	40063	40063		3.5965	1.2938	1	7476200	+		17625	14436	8404	8442	20622	20622					0.06317397160455585
LGAFKERSL	9	Unmodified	_LGAFKERSL_					0	0	0			REV__ENSG00000178235|ENST00000674365|SLITRK1	REV__ENSG00000178235|ENST00000674365|SLITRK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.7587768435478	2	510.795466	1019.57638	2.9832	0.0015238	-3.7211	-0.0019007	-0.73794	-0.00037694	511.29599410816763	75.372	0.39365	76.678	76.374	76.768	1.3063					21	12	3	0	0	0	0.10306	1	31663	31663		13.508	0.97634	1	687150	+		17626	11243	8405	8443	20623	20623					0.06737449197191836
LGAFRPER	8	Unmodified	_LGAFRPER_					0	0	0			REV__ENST00000463065.5_1_1:85462613-85462766:-|nuORF	REV__ENST00000463065.5_1_1:85462613-85462766:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2622253298759	2	473.266876	944.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.325	1	38.143	37.643	38.643	1.8176								0	0	0	1.0178	1	15233	15233		19.439	1.304	1		+		17627	13212	8406	8444	20624	20624					0.044720267114598755
LGALHCSC	8	Unmodified	_LGALHCSC_					0	0	0		ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1807128787041	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.843	1	51.843	51.343	52.343	0								0	0	0	1.0178	1	21621	21621		0.79363	0	1				17628	7267	8407	8445	20625	20625					-0.06250004011769761
LGALHCSC	8	Unmodified	_LGALHCSC_					0	0	0		ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	ENST00000551041.6_1_12:112844433-112844658:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1804687380791	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.94	1	51.94	51.44	52.44	0								0	0	0	1.0178	1	21662	21662		0.79363	0	1				17629	7267	8407	8445	20626	20626					-0.06250004011769761
LGALSSNK	8	Unmodified	_LGALSSNK_					0	0	0			REV__tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	REV__tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	395.2267639040947	2	395.226885	788.439217	0.018043	7.1312E-06	-2.3702	-0.00093677	-2.3522	-0.00092964	395.22582885063474	67.213	0.57988	67.213	66.924	67.504	0					40	18	3	0	0	0	0.89176	1	27916	27916		0.79363	0	1	14824000	+		17630	15165	8408	8446	20627	20627					0.03653540317623083
LGARGVHR	8	Unmodified	_LGARGVHR_					0	0	0			REV__SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|1|1|sense	REV__SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|1|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2587463259697	2	433.259385	864.504218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.62	1	103.78	103.28	104.28	0.16055								0	0	0	1.0178	1	43722	43722		0.69038	0	1		+		17631	14669	8409	8447	20628	20628					0.06654579634118818
LGASRKRF	8	Unmodified	_LGASRKRF_					0	0	0		ENST00000340181.8_1_6:36355390-36355519:-|nuORF	ENST00000340181.8_1_6:36355390-36355519:-|nuORF	ENST00000340181.8_1_6:36355390-36355519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7834655642509	2	467.782693	933.550834	2.8263	0.0013221	-1.6191	-0.00075741	1.2072	0.00056471	467.7819803498284	60.132	0.42073	61.552	61.328	61.748	1.4196					36	13	3	0	0	0	0.87276	1	25276	25276		13.508	13.508	1	13331000			17632	5929	8410	8448	20629	20629					0.08140019465417936
LGASTLDKL	9	Unmodified	_LGASTLDKL_					0	0	0		tr|A0A7D7A323|A0A7D7A323_9CLOTInosine-5'-monophosphatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=guaBPE=3SV=1	tr|A0A7D7A323|A0A7D7A323_9CLOTInosine-5'-monophosphatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=guaBPE=3SV=1	tr|A0A7D7A323|A0A7D7A323_9CLOTInosine-5'-monophosphatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=guaBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1734496951103	2	459.26875	916.522947	2.6934	0.001237	-0.5554	-0.00025508	2.138	0.0009819	459.26841246286415	61.233	0.43571	61.563	61.36	61.796	0.32974					36	13	3	0	0	0	0.10591	1	25611	25611		7.9102	0	1	9331700			17633	17269	8411	8449	20630	20630					0.061346516946514384
LGATTLVLV	9	Unmodified	_LGATTLVLV_					0	0	0		nc|ENSG00000142166|P17181-2|IFNAR1;IFNAR1|p.S422Lfs*20|1|0.22|ENSG00000142166|chr21:33352872-33352873|-/TT|frameshift_variant;IFNAR1|p.K417Rfs*25|1|0.04|ENSG00000142166|chr21:33352863-33352864|-/GG|frameshift_variant;nc|ENSG00000142166|P17181-3|IFNAR1;ENSG00000142166|ENST00000270139|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	886.5625488162041	1	886.560795	885.553519	1.7414	0.0015438	0.26323	0.00023337	2.0046	0.0017772	886.5606249414798	65.399	0.41298	65.399	65.166	65.579	0					24	12	3	0	0	0	0.11478	1	27212	27212		44.407	6.433	1	2097500			17634	2984	8412	8450	20631	20631					0.10616430079710426
LGATTLVLV	9	Unmodified	_LGATTLVLV_					0	0	0		nc|ENSG00000142166|P17181-2|IFNAR1;IFNAR1|p.S422Lfs*20|1|0.22|ENSG00000142166|chr21:33352872-33352873|-/TT|frameshift_variant;IFNAR1|p.K417Rfs*25|1|0.04|ENSG00000142166|chr21:33352863-33352864|-/GG|frameshift_variant;nc|ENSG00000142166|P17181-3|IFNAR1;ENSG00000142166|ENST00000270139|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	886.5631591677666	1	886.560795	885.553519	1.9717	0.0017481	0.067725	6.0042E-05	2.0395	0.0018081	886.5606631290067	64.884	0.35034	65.21	65.038	65.388	0.32689					22	10	3	0	0	0	0.046276	1	27207	27207		70.716	12.037	1	2390300			17635	2984	8412	8450	20632	20632					0.10616430079710426
LGCEQCHSL	9	Unmodified	_LGCEQCHSL_					0	0	0			REV__WWP2-TMCO7|2|fusion	REV__WWP2-TMCO7|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2118713259697	2	495.212595	988.410636	2.088	0.001034	-1.6119	-0.00079825	0.47604	0.00023574	495.2118138661442	84.733	0.28678	84.733	84.558	84.845	0					14	8	2	0	0	0	0.66839	1	35288	35288		8.5933	3.3626	1	996350	+		17636	9093	8413	8451	20633	20633					-0.0840326864548615
LGCEQCHSL	9	Unmodified	_LGCEQCHSL_					0	0	0			REV__WWP2-TMCO7|2|fusion	REV__WWP2-TMCO7|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2125121951103	2	495.212595	988.410636	1.9612	0.00097119	-1.6694	-0.00082673	0.29171	0.00014446	495.21174496365484	83.482	0.31588	84.67	84.451	84.767	1.1879					14	9	2	0	0	0	0.66839	1	35056	35056		8.5933	2.8329	1	769810	+		17637	9093	8413	8451	20634	20634					-0.0840326864548615
LGCEQCHSL	9	Unmodified	_LGCEQCHSL_					0	0	0			REV__WWP2-TMCO7|2|fusion	REV__WWP2-TMCO7|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	495.212595	988.410636	2.088	0.001034	-1.6119	-0.00079825	0.47604	0.00023574	495.2118138661442	84.733	0.28678	84.733	84.558	84.845	0	0.075375	-0.00024217	NaN	8.5933	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	996350	+		17638	9093	8413	8451							-0.0840326864548615
LGCEQCHSL	9	Unmodified	_LGCEQCHSL_					0	0	0			REV__WWP2-TMCO7|2|fusion	REV__WWP2-TMCO7|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	495.212595	988.410636	3.124	0.001547	-1.1591	-0.00057399	1.9649	0.00097306	495.21188413640164	84.309	0.31844	84.57	84.343	84.662	0.26083	-0.087778	0.00020634	NaN	8.5933	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	601260	+		17639	9093	8413	8451							-0.0840326864548615
LGCEQCHSL	9	Unmodified	_LGCEQCHSL_					0	0	0			REV__WWP2-TMCO7|2|fusion	REV__WWP2-TMCO7|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.212595	988.410636	1.9612	0.00097119	-1.6694	-0.00082673	0.29171	0.00014446	495.21174496365484	83.482	0.31588	84.67	84.451	84.767	1.1879	0.012404	-0.00029914	NaN	8.5933	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	769810	+		17640	9093	8413	8451							-0.0840326864548615
LGDINENHAF	10	Unmodified	_LGDINENHAF_					0	0	0			REV__tr|A0A553SKJ0|A0A553SKJ0_NIACIU32familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_18720PE=3SV=1	REV__tr|A0A553SKJ0|A0A553SKJ0_NIACIU32familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_18720PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.2686645388603	2	565.26727	1128.51999	2.6086	0.0014745	-0.89479	-0.0005058	1.7138	0.00096873	565.2665832302031	77.068	0.32103	78.349	78.186	78.507	1.2809					22	9	3	0	0	0	0.75645	1	32315	32315		15.847	2.3393	1	2673000	+		17641	14954	8414	8452	20635	20635					-0.03913223430140533
LGDLIPIVT	9	Unmodified	_LGDLIPIVT_					0	0	0			REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	REV__tr|A0A553SIA2|A0A553SIA2_NIACIYwpF-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_14475PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	940.5733520388603	1	940.57136	939.564084	1.9728	0.0018555	0.1556	0.00014635	2.1284	0.0020019	940.5714323402059	80.573	0.37181	80.863	80.655	81.026	0.29056					17	11	2	0	0	0	0.10993	1	33689	33689		46.021	2.1627	1	538560	+		17642	14844	8415	8453	20636	20636					0.09188412734147278
LGDLVAQFT	9	Unmodified	_LGDLVAQFT_					0	0	0			REV__PRAMEF20|p.R232Sfs*10|1|0.05|ENSG00000204478|chr1:13418529-13418530|-/T|frameshift_variant	REV__PRAMEF20|p.R232Sfs*10|1|0.05|ENSG00000204478|chr1:13418529-13418530|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.2603637576103	2	482.260925	962.507297	2.7118	0.0013078	-2.9167	-0.0014066	-0.20484	-9.8786E-05	482.25948270903143	65.311	0.4454	65.638	65.356	65.801	0.32689					22	13	2	0	0	0	0.073578	1	27364	27364		58.679	12.658	1	1346000	+		17643	11784	8416	8454	20637	20637					0.02454365177618456
LGDPCGRPVQ	10	Unmodified	_LGDPCGRPVQ_					0	0	0			REV__ENST00000460583.1_1_1:147119227-147122061:-|nuORF	REV__ENST00000460583.1_1_1:147119227-147122061:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.2637817263603	2	521.260933	1040.50731	1.9894	0.001037	2.8135	0.0014666	4.8029	0.0025036	521.2630062643343	79.406	0.43413	79.406	79.175	79.609	0					37	13	4	0	0	0	0.19223	1	33056	33056		49.933	0.37871	1	5460500	+		17644	10667	8417	8455	20638	20638					-0.011319580940380547
LGEALLTVV	9	Unmodified	_LGEALLTVV_					0	0	0			REV__BCKDK|p.D164A|1|0.2|ENSG00000103507|chr16:31110272-31110272|A/C|missense_variant	REV__BCKDK|p.D164A|1|0.2|ENSG00000103507|chr16:31110272-31110272|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	914.5663940310478	1	914.55571	913.548434	3.2641	0.0029852	-0.12025	-0.00010998	3.1438	0.0028752	914.5558626580009	73.038	0.37383	74.368	74.195	74.569	1.3298					29	11	3	0	0	0	0.069258	1	30625	30625		60.39	0	1	5873100	+		17645	8161	8418	8456	20639	20639					0.08820126217085544
LGEKVLLPPI	10	Unmodified	_LGEKVLLPPI_					0	0	0		tr|A0A553STF1|A0A553STF1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04715PE=4SV=1	tr|A0A553STF1|A0A553STF1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04715PE=4SV=1	tr|A0A553STF1|A0A553STF1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04715PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2351257205009	3	360.23387	1077.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.347	1	59.316	58.816	59.816	1.9684								0	0	0	0.66218	1	24056	24056		0.77653	0.078866	1				17646	16649	8419	8457	20640	20640					0.14404936584992356
LGETFFTTR	9	Unmodified	_LGETFFTTR_					0	0	0			REV__tr|A0A7D7A6P8|A0A7D7A6P8_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11600PE=4SV=1	REV__tr|A0A7D7A6P8|A0A7D7A6P8_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11600PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1677123904228	2	536.277106	1070.53966	2.4019	0.0012881	-4.4621	-0.0023929	-2.0602	-0.0011048	536.274028445998	59.704	0.21939	60.029	59.933	60.152	0.32554					10	6	2	0	0	0	0.11719	1	25003	25003		0.40072	0	1	480410	+		17647	15893	8420	8458	20641	20641					0.007211525805814745
LGFLVAVE	8	Unmodified	_LGFLVAVE_					0	0	0		ENST00000334828.5_1_10:99192885-99192939:+|nuORF	ENST00000334828.5_1_10:99192885-99192939:+|nuORF	ENST00000334828.5_1_10:99192885-99192939:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	847.4951049685478	1	847.492381	846.485105	1.668	0.0014136	-0.14644	-0.0001241	1.5216	0.0012895	847.4936082505133	71.935	0.28132	73.276	73.122	73.403	1.3415					14	8	2	0	0	0	0.61323	1	30170	30170		38.992	0	1	1018800			17648	5905	8421	8459	20642	20642					0.05572185499852367
LGGAGLLVG	9	Unmodified	_LGGAGLLVG_					0	0	0			REV__tr|A0A7D6VYC8|A0A7D6VYC8_9CLOTYigZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15395PE=3SV=1	REV__tr|A0A7D6VYC8|A0A7D6VYC8_9CLOTYigZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15395PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	756.4631225466728	1	756.461416	755.454139	2.0832	0.0015759	0.97048	0.00073413	3.0537	0.00231	756.4619786771311	58.453	0.32355	58.453	58.266	58.59	0					16	9	2	0	0	0	0.16975	2	24402	24350;24402		36.466	0	1	785250	+		17649	15560	8422	8460	20643;20644	20644					0.06663032185610973
LGGAGLLVG	9	Unmodified	_LGGAGLLVG_					0	0	0			REV__tr|A0A7D6VYC8|A0A7D6VYC8_9CLOTYigZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15395PE=3SV=1	REV__tr|A0A7D6VYC8|A0A7D6VYC8_9CLOTYigZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15395PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	756.4623901247978	1	756.461416	755.454139	1.1843	0.00089591	-0.094782	-7.1699E-05	1.0896	0.00082421	756.4612628146917	56.815	0.30641	58.229	58.063	58.369	1.4145					16	9	2	0	0	0	0.16975	1	23849	23849		36.466	0	1	3366300	+		17650	15560	8422	8460	20645	20645					0.06663032185610973
LGGECEET	8	Unmodified	_LGGECEET_					0	0	0		ENST00000326925.10_1_3:49060685-49060871:+|nuORF	ENST00000326925.10_1_3:49060685-49060871:+|nuORF	ENST00000326925.10_1_3:49060685-49060871:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.1706115603447	2	419.168376	836.322198	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.32	1	103.32	102.82	103.82	0								0	0	0	1.0178	1	43345	43345		2.5775	1.7838	1				17651	5872	8423	8461	20646	20646					-0.10250985684308489
LGGFRKKKKLN	11	Unmodified	_LGGFRKKKKLN_					0	0	0		tr|A0A553SSL2|A0A553SSL2_NIACIGAFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03365PE=4SV=1	tr|A0A553SSL2|A0A553SSL2_NIACIGAFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03365PE=4SV=1	tr|A0A553SSL2|A0A553SSL2_NIACIGAFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03365PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	644.4575073122978	2	644.914239	1287.81392	2.7691	0.0017859	-1.4725	-0.00094966	1.2966	0.00083619	644.9126985230743	106.65	0.12424	106.81	106.71	106.84	0.15781					7	5	2	0	0	0	0.14606	1	45690	45690		0.35063	0.043601	1	2813200			17652	16620	8424	8462	20647	20647					0.18153015130405947
LGGGAKGG	8	Unmodified	_LGGGAKGG_					0	0	0			REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.8998290896416	2	308.674289	615.334024	-0.5615	-0.00017332	0.063318	1.9545E-05	-0.49818	-0.00015378	308.67435491468507	3.7419	0.24079	3.8439	3.7373	3.9781	0.10199					16	11	2	0	0	0	2.3239	1	1574	1574		0	0	1	298040	+		17653	13959	8425	8463	20648	20648					0.010970439118750619
LGGGAKGG	8	Unmodified	_LGGGAKGG_					0	0	0			REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	308.674289	615.334024	-1.6348	-0.00050463	0.67042	0.00020694	-0.96442	-0.00029769	308.67455530890527	3.1685	0.19107	3.7921	3.7087	3.8998	0.62362	-0.069823	0.00017972	NaN	0	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187100	+		17654	13959	8425	8463							0.010970439118750619
LGGGAKGG	8	Unmodified	_LGGGAKGG_					0	0	0			REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	REV__ENST00000570069.5_1_16:1829856-1829988:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	308.674289	615.334024	-0.63889	-0.00019721	0.35965	0.00011102	-0.27924	-8.6194E-05	308.6742625075838	3.2014	0.18254	3.9498	3.8082	3.9908	0.7484	0.087826	-1.2133E-05	NaN	0	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	168950	+		17655	13959	8425	8463							0.010970439118750619
LGGHGAKLRWI	11	Unmodified	_LGGHGAKLRWI_					0	0	0			REV__ENST00000497891.1_1_7:143098260-143104736:-|nuORF	REV__ENST00000497891.1_1_7:143098260-143104736:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3575317263603	2	604.356557	1206.69856	2.8873	0.001745	-0.20112	-0.00012155	2.6862	0.0016234	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	1.0357	1	36324	36324		1.4819	0	1	89814000	+		17656	13486	8426	8464	20649	20649					0.10347910999394117
LGGIKVKL	8	Unmodified	_LGGIKVKL_					0	0	0		nc|ENSG00000186191|P59827-2|BPIFB4;ENSG00000186191|ENST00000375483|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.2903930544853	2	414.289288	826.564024	0.85789	0.00035541	2.0066	0.0008313	2.8645	0.0011867	414.2902445011045	51.451	0.55759	51.451	51.199	51.756	0					28	17	2	0	0	0	0.31225	1	21418	21418		70.716	7.1527	1	762700			17657	4780	8427	8465	20650	20650					0.1438045752480548
LGGIKVKL	8	Unmodified	_LGGIKVKL_					0	0	0		nc|ENSG00000186191|P59827-2|BPIFB4;ENSG00000186191|ENST00000375483|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.2895690798759	2	414.289288	826.564024	1.8748	0.00077669	1.9355	0.00080185	3.8102	0.0015785	414.28987531390646	48.751	0.3403	50.728	50.514	50.854	1.9772					20	10	3	0	0	0	0.31225	1	20411	20411		70.716	7.1527	1	3050100			17658	4780	8427	8465	20651	20651					0.1438045752480548
LGGIKVKL	8	Unmodified	_LGGIKVKL_					0	0	0		nc|ENSG00000186191|P59827-2|BPIFB4;ENSG00000186191|ENST00000375483|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	nc|ENSG00000186191|P59827-2|BPIFB4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	414.289288	826.564024	1.9399	0.00080369	3.7133	0.0015384	5.6532	0.0023421	414.29154496436365	50.946	0.59328	51.274	50.918	51.511	0.32824	-0.088433	0.0011492	NaN	70.716	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1256900			17659	4780	8427	8465							0.1438045752480548
LGGLALLSDL	10	Unmodified	_LGGLALLSDL_					0	0	0			REV__nc|ENSG00000170291|Q8TE02-3|ELP5	REV__nc|ENSG00000170291|Q8TE02-3|ELP5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	486.9593383669853	2	486.292225	970.569897	2.4529	0.0011928	1.6454	0.00080014	4.0983	0.001993	486.2931651799167	88.746	0.34875	88.746	88.574	88.922	0					17	10	2	0	0	0	0.12513	1	37160	37160		7.9102	3.5809	1	2037300	+		17660	10979	8428	8466	20652	20652					0.08343511245811897
LGGPFHVL	8	Unmodified	_LGGPFHVL_					0	0	0		nc|ENSG00000165125|Q9H1D0-2|TRPV6;ENSG00000165125|ENST00000359396|TRPV6	nc|ENSG00000165125|Q9H1D0-2|TRPV6	nc|ENSG00000165125|Q9H1D0-2|TRPV6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	420.7645751833916	2	420.242338	838.470124	0.28974	0.00012176	-4.0405	-0.001698	-3.7508	-0.0015762	420.2409710941632	17.341	0.36438	18.643	18.413	18.777	1.3023					18	12	2	0	0	0	2.3239	1	7236	7236		17.087	0	1	538820			17661	3816	8429	8467	20653	20653					0.044427384225286914
LGGPFHVL	8	Unmodified	_LGGPFHVL_					0	0	0		nc|ENSG00000165125|Q9H1D0-2|TRPV6;ENSG00000165125|ENST00000359396|TRPV6	nc|ENSG00000165125|Q9H1D0-2|TRPV6	nc|ENSG00000165125|Q9H1D0-2|TRPV6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	420.242338	838.470124	0.40932	0.00017201	-2.5998	-0.0010925	-2.1904	-0.00092052	420.2415722943622	17.668	0.41229	18.647	18.433	18.845	0.97922	0.002074	0.00057913	NaN	17.087	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603570			17662	3816	8429	8467							0.044427384225286914
LGGQLGMYTL	10	Unmodified	_LGGQLGMYTL_					0	0	0		SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant;SLC1A6|p.I396Mfs*51|1|0.01|ENSG00000105143|chr19:14954311-14954312|-/CAACTCACTACTC|frameshift_variant;SLC1A6|p.I396Tfs*122|1|0.28|ENSG00000105143|chr19:14954312-14954313|-/CTCCTCTCTCTCTCTCCCAGGCTGAAGTGCAG|frameshift_variant;ENSG00000105143|ENST00000594383|SLC1A6	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	SLC1A6|p.T397Sfs*49|1|0.04|ENSG00000105143|chr19:14954309-14954310|-/CTCAGCTCAC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.7390014529228	2	526.775885	1051.53722	2.3639	0.0012452	-0.8422	-0.00044365	1.5217	0.00080159	526.7755784397654	71.807	0.31186	73.631	73.412	73.724	1.824					11	9	2	0	0	0	0.12438	1	30130	30130		11.64	2.2929	1	359330			17663	1498	8430	8468	20654	20654					0.013509808512935706
LGGRHPLHHE	10	Unmodified	_LGGRHPLHHE_					0	0	0		ENST00000548086.1_12:52174024-52180420:+|nuORF;ENST00000545061.1_12:52168115-52180420:+|nuORF	ENST00000548086.1_12:52174024-52180420:+|nuORF	ENST00000548086.1_12:52174024-52180420:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.8057128787041	2	576.804688	1151.59482	0.82006	0.00047301	0.29873	0.00017231	1.1188	0.00064532	576.8047231239269	22.15	0.4349	22.15	21.966	22.401	0					27	13	3	0	0	0	0.85124	1	9254	9254		6.7232	0	1	1463200			17664	7233	8431	8469	20655	20655					0.025090038917596758
LGGSALGLV	9	Unmodified	_LGGSALGLV_					0	0	0			REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	786.4728881716728	1	786.47198	785.464704	2.0632	0.0016227	0.60859	0.00047864	2.6718	0.0021013	786.4724084653325	58.736	0.54391	58.736	58.493	59.037	0					49	16	4	0	0	0	0.033521	1	24449	24449		81.864	3.8797	1	35287000	+		17665	13165	8432	8470	20656	20656					0.06339014840034451
LGGSALGLV	9	Unmodified	_LGGSALGLV_					0	0	0			REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.7403747439384	2	393.739628	785.464704	0.81028	0.00031904	-0.31048	-0.00012225	0.49981	0.00019679	393.7396114007865	57.091	0.32697	58.505	58.369	58.696	1.4145					18	10	2	0	0	0	0.069258	1	23986	23986		60.39	13.469	1	12466000	+		17666	13165	8432	8470	20657	20657					0.06339014840034451
LGGSALGLV	9	Unmodified	_LGGSALGLV_					0	0	0			REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	393.739628	785.464704	0.271	0.00010671	2.076	0.00081739	2.347	0.00092409	393.74024740287877	58.672	0.32019	58.672	58.526	58.846	0	0.064186	0.0014513	NaN	60.39	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1079000	+		17667	13165	8432	8470							0.06339014840034451
LGGSALGLV	9	Unmodified	_LGGSALGLV_					0	0	0			REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	REV__ENST00000456170.5_1_1:44750519-44774008:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	393.739628	785.464704	0.81028	0.00031904	-0.31048	-0.00012225	0.49981	0.00019679	393.7396114007865	57.091	0.32697	58.505	58.369	58.696	1.4145	-0.10273	-0.00042798	NaN	60.39	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12466000	+		17668	13165	8432	8470							0.06339014840034451
LGGSEHASSPV	11	Unmodified	_LGGSEHASSPV_					0	0	0		SMARCA4-DNM2|25|fusion;SMARCA4-DNM2|20|fusion;SMARCA4-DNM2|24|fusion;SMARCA4-DNM2|19|fusion;SMARCA4-DNM2|18|fusion;SMARCA4-DNM2|17|fusion;SMARCA4-DNM2|23|fusion;SMARCA4-DNM2|16|fusion;SMARCA4-DNM2|22|fusion;SMARCA4-DNM2|15|fusion;SMARCA4-DNM2|14|fusion;SMARCA4-DNM2|21|fusion;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4;SMARCA4-DNM2|10|fusion;SMARCA4-DNM2|11|fusion;SMARCA4|p.I1250Tfs*41|1|0.04|ENSG00000127616|chr19:11033492-11033492|T/-|frameshift_variant;SMARCA4-DNM2|1|fusion;SMARCA4-DNM2|2|fusion;SMARCA4-DNM2|13|fusion;SMARCA4-DNM2|5|fusion;SMARCA4-DNM2|12|fusion;SMARCA4-DNM2|7|fusion;SMARCA4-DNM2|8|fusion;SMARCA4|p.E664Gfs*44|1|0.16|ENSG00000127616|chr19:11003386-11003387|-/GTCAGGAGATCGAGACTGTCTTGGCTAACAC|frameshift_variant;SMARCA4-DNM2|9|fusion;SMARCA4-C19orf38|1|fusion	SMARCA4-DNM2|25|fusion	SMARCA4-DNM2|25|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	520.7552368044853	2	520.753995	1039.49344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.864	1	79.173	78.673	79.673	0.30933								0	0	0	0.63768	1	32974	32974		13.906	0.86358	1				17669	2342	8433	8471	20658	20658					-0.024729123214683568
LGGVFLKGVAL	11	Unmodified	_LGGVFLKGVAL_					0	0	0			REV__chr19:1415281-1417500|126|14.11|0.18|6.27|+|1|None,DAZAP1|1	REV__chr19:1415281-1417500|126|14.11|0.18|6.27|+|1|None,DAZAP1|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3412353396416	2	537.33951	1072.66447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.122	1	85.76	85.26	86.26	1.6379								0	0	0	0.40084	1	35280	35280		30.637	3.7529	1		+		17670	8284	8434	8472	20659	20659					0.13104069787800654
LGGVGVKK	8	Unmodified	_LGGVGVKK_					0	0	0		chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.2497131228447	2	379.250163	756.485774	-0.1378	-5.2262E-05	-3.1999	-0.0012136	-3.3377	-0.0012658	379.2489806960347	63.848	1.1318	63.848	63.492	64.624	0					99	35	5	0	0	0	0.89176	3	26544	26544;26594;26633		0.79363	0	1	140770000			17671	283	8435	8473	20660;20661;20662	20660					0.09779024939564351
LGGVGVKK	8	Unmodified	_LGGVGVKK_					0	0	0		chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	379.250163	756.485774	1.8068	0.00068522	-5.367	-0.0020354	-3.5602	-0.0013502	379.24816857811044	63.625	0.96446	63.954	63.661	64.626	0.32899	-0.024315	-0.00046048	NaN	0.79363	88	30	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	234120000			17672	283	8435	8473							0.09779024939564351
LGGVGVKK	8	Unmodified	_LGGVGVKK_					0	0	0		chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	379.250163	756.485774	2.1063	0.00079882	-4.3126	-0.0016356	-2.2063	-0.00083673	379.24854605573023	62.561	0.76071	63.974	63.711	64.471	1.4134	-0.0045156	0.00033927	NaN	0.79363	64	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71175000			17673	283	8435	8473							0.09779024939564351
LGGVGVKK	8	Unmodified	_LGGVGVKK_					0	0	0		chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	chr7:44118060-44121834|118|10.82|0.46|4.54|-|1|None,POLD2|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	379.250163	756.485774	2.8735	0.0010898	-5.2783	-0.0020018	-2.4048	-0.00091202	379.2481876797544	62.181	1.0133	64.138	63.751	64.764	1.9571	0.1596	-0.00039319	NaN	0.79363	96	32	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81788000			17674	283	8435	8473							0.09779024939564351
LGGVPAPER	9	Unmodified	_LGGVPAPER_					0	0	0		ENSG00000185888|ENST00000366757|PRSS38	ENSG00000185888|ENST00000366757|PRSS38	ENSG00000185888|ENST00000366757|PRSS38	MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2553283572197	2	448.253434	894.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.793	1	87.793	87.293	88.293	0								0	0	0	0.42693	1	36695	36695		2.3027	0	1				17675	4769	8436	8474	20663	20663					0.04084918100284085
LGHADCQGW	9	Unmodified	_LGHADCQGW_					0	0	0		ENST00000518162.1_1_6:154544302-154568634:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.7123290896416	2	493.711076	985.4076	3.2237	0.0015916	0.68834	0.00033984	3.912	0.0019314	493.7109914613944	85.055	0.2516	85.316	85.142	85.393	0.26083					12	7	2	0	0	0	0.76456	1	35561	35561		4.756	1.8668	1	844480			17676	917	8437	8475	20664	20664					-0.08568775707988152
LGHADCQGW	9	Unmodified	_LGHADCQGW_					0	0	0		ENST00000518162.1_1_6:154544302-154568634:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	493.711076	985.4076	2.2282	0.0011001	1.3798	0.0006812	3.6079	0.0017813	493.7116793492011	85.413	0.34314	85.413	85.229	85.572	0	-0.017314	-0.00023078	NaN	4.756	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	784430			17677	917	8437	8475							-0.08568775707988152
LGHADCQGW	9	Unmodified	_LGHADCQGW_					0	0	0		ENST00000518162.1_1_6:154544302-154568634:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	493.711076	985.4076	1.7065	0.00084252	2.5632	0.0012655	4.2697	0.002108	493.7121461540059	84.319	0.27944	85.478	85.31	85.589	1.159	0.048138	0.00093778	NaN	4.756	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1120500			17678	917	8437	8475							-0.08568775707988152
LGHADCQGW	9	Unmodified	_LGHADCQGW_					0	0	0		ENST00000518162.1_1_6:154544302-154568634:-|nuORF;nc|ENSG00000074706|Q8WWN9|IPCEF1;ENSG00000074706|ENST00000367220|IPCEF1;nc|ENSG00000288520|G9CGD6|CNK3;nc|ENSG00000288520|G9CGD6-2|CNK3	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	ENST00000518162.1_1_6:154544302-154568634:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	493.711076	985.4076	1.9567	0.00096604	1.9431	0.00095935	3.8998	0.0019254	493.7119123037192	83.876	0.24161	85.513	85.412	85.653	1.6379	0.083299	0.00032552	NaN	4.756	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	549810			17679	917	8437	8475							-0.08568775707988152
LGHGDMCTEH	10	Unmodified	_LGHGDMCTEH_					0	0	0			REV__ENST00000513185.1_1_5:98109449-98109824:+|nuORF	REV__ENST00000513185.1_1_5:98109449-98109824:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	550.2181274294853	2	550.218408	1098.42226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.925	1	34.925	34.425	35.425	0								0	0	0	0.66008	1	14638	14638		4.3292	2.0265	1		+		17680	13587	8438	8476	20665	20665					-0.12301071622164272
LGHPPRITV	9	Unmodified	_LGHPPRITV_					0	0	0		ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2996398806572	2	495.298176	988.581799	2.2247	0.0011019	-0.19206	-9.5128E-05	2.0327	0.0010068	495.2974580679386	85.743	0.28067	85.743	85.603	85.884	0					14	8	2	0	0	0	0.54523	1	35733	35733		13.508	3.3245	1	1323300			17681	6668	8439	8477	20666	20666					0.08705172779650638
LGHPPRITV	9	Unmodified	_LGHPPRITV_					0	0	0		ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2980224490166	2	495.298176	988.581799	3.2098	0.0015898	-2.029	-0.0010049	1.1808	0.00058487	495.2970505153228	85.272	0.30984	85.524	85.416	85.726	0.25227					14	9	2	0	0	0	0.54523	1	35665	35665		13.508	4.9146	1	1176400			17682	6668	8439	8477	20667	20667					0.08705172779650638
LGHPPRITV	9	Unmodified	_LGHPPRITV_					0	0	0		ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2987548708916	2	495.298176	988.581799	1.8218	0.00090236	0.558	0.00027638	2.3798	0.0011787	495.29811344585573	84.446	0.37964	85.605	85.434	85.814	1.159					22	11	3	0	0	0	0.54523	1	35467	35467		13.508	0	1	5090500			17683	6668	8439	8477	20668	20668					0.08705172779650638
LGHPPRITV	9	Unmodified	_LGHPPRITV_					0	0	0		ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	ENST00000461241.1_1_22:31518992-31523076:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	495.298176	988.581799	2.0128	0.00099693	-0.84859	-0.0004203	1.1642	0.00057663	495.29759211394065	84.004	0.33507	85.642	85.475	85.81	1.6379	0.012997	-0.00031115	NaN	13.508	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4148600			17684	6668	8439	8477							0.08705172779650638
LGHSRLHAE	9	Unmodified	_LGHSRLHAE_					0	0	0			REV__ENSG00000126464|ENST00000418929|PRR12	REV__ENSG00000126464|ENST00000418929|PRR12	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.7726013064384	2	510.27269	1018.53083	2.3072	0.0011773	0.25601	0.00013063	2.5632	0.0013079	510.27284725730357	47.992	0.75463	49.38	48.798	49.552	1.388					51	23	4	0	0	0	0.1006	1	20078	20078		15.847	5.7733	1	16035000	+		17685	9697	8440	8478	20669	20669					0.022302237348071685
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7751342654228	2	497.773145	993.531738	1.7521	0.00087214	2.5327	0.0012607	4.2848	0.0021329	497.77431004566284	92.793	0.67148	92.793	92.53	93.202	0					50	21	3	0	0	0	0.10722	4	38824	38723;38771;38824;38879		46.921	7.9264	1	13275000	+		17686	9103	8441	8479	20670;20671;20672;20673	20672					0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.7748290896416	2	497.773145	993.531738	3.2808	0.0016331	1.1057	0.00055036	4.3865	0.0021835	497.7736514690729	92.468	0.55571	92.637	92.377	92.933	0.16835					45	17	3	0	0	0	0.10722	4	38711	38665;38711;38753;38807		46.921	10.877	1	10683000	+		17687	9103	8441	8479	20674;20675;20676;20677	20675					0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7774230837822	2	497.773145	993.531738	4.121	0.0020513	0.67976	0.00033837	4.8008	0.0023897	497.7734227872369	91.729	0.74245	92.665	92.34	93.082	0.93623					67	23	4	0	0	0	0.15478	2	38539	38539;38584		38.151	7.9264	1	25281000	+		17688	9103	8441	8479	20678;20679	20678					0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7769653201103	2	497.773145	993.531738	3.2614	0.0016234	1.4535	0.0007235	4.7148	0.0023469	497.77379782979295	91.326	0.68665	92.692	92.374	93.06	1.366					67	21	4	0	0	0	0.15478	4	38374	38374;38423;38476;38531		38.151	7.9264	1	25343000	+		17689	9103	8441	8479	20680;20681;20682;20683	20680					0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	497.773145	993.531738	1.7521	0.00087214	2.5327	0.0012607	4.2848	0.0021329	497.77431004566284	92.793	0.67148	92.793	92.53	93.202	0	0.09628	0.0011002	NaN	46.921	50	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13275000	+		17690	9103	8441	8479							0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	497.773145	993.531738	3.2808	0.0016331	1.1057	0.00055036	4.3865	0.0021835	497.7736514690729	92.468	0.55571	92.637	92.377	92.933	0.16835	-0.059969	-0.00032053	NaN	46.921	45	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10683000	+		17691	9103	8441	8479							0.03471302059494974
LGHVMELPV	9	Unmodified	_LGHVMELPV_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.773145	993.531738	3.2614	0.0016234	1.4535	0.0007235	4.7148	0.0023469	497.77379782979295	91.326	0.68665	92.692	92.374	93.06	1.366	-0.0043584	2.5755E-05	NaN	46.921	67	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25343000	+		17692	9103	8441	8479							0.03471302059494974
LGIDYGVNL	9	Unmodified	_LGIDYGVNL_					0	0	0			REV__ENSG00000168135|ENST00000303592|KCNJ4	REV__ENSG00000168135|ENST00000303592|KCNJ4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	482.3048583865166	2	482.260925	962.507297	2.7118	0.0013078	-2.9167	-0.0014066	-0.20484	-9.8786E-05	482.25948270903143	65.311	0.4454	65.638	65.356	65.801	0.32689					22	13	2	0	0	0	0.11071	1	27395	27395		15.847	1.2655	1	1346000	+		17693	10897	8442	8480	20684	20684					0.02454365177618456
LGIDYGVNL	9	Unmodified	_LGIDYGVNL_					0	0	0			REV__ENSG00000168135|ENST00000303592|KCNJ4	REV__ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2613708376884	2	482.260925	962.507297	2.864	0.0013812	-0.41689	-0.00020105	2.4471	0.0011801	482.26033496609534	64.195	0.40354	65.602	65.336	65.74	1.4071					25	12	3	0	0	0	0.13873	1	26928	26928		39.957	1.9833	1	3224500	+		17694	10897	8442	8480	20685	20685					0.02454365177618456
LGIDYGVNL	9	Unmodified	_LGIDYGVNL_					0	0	0			REV__ENSG00000168135|ENST00000303592|KCNJ4	REV__ENSG00000168135|ENST00000303592|KCNJ4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	482.3042480349541	2	482.260925	962.507297	2.6332	0.0012699	-1.7502	-0.00084407	0.88295	0.00042581	482.2601223500582	63.638	0.37313	65.583	65.377	65.75	1.9444					27	11	3	0	0	0	0.029304	1	26706	26706		39.957	0	1	1926900	+		17695	10897	8442	8480	20686	20686					0.02454365177618456
LGIDYGVNL	9	Unmodified	_LGIDYGVNL_					0	0	0			REV__ENSG00000168135|ENST00000303592|KCNJ4	REV__ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	482.260925	962.507297	1.9405	0.00093582	-2.6376	-0.001272	-0.69714	-0.0003362	482.25931066315025	65.757	0.29123	65.757	65.546	65.837	0	0.11184	-0.00023638	NaN	39.957	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	984330	+		17696	10897	8442	8480							0.02454365177618456
LGIENLPYI	9	Unmodified	_LGIENLPYI_					0	0	0			REV__tr|A0A553SN49|A0A553SN49_NIACISignalpeptidaseIOS=NialliacirculansOX=1397GN=lepBPE=3SV=1	REV__tr|A0A553SN49|A0A553SN49_NIACISignalpeptidaseIOS=NialliacirculansOX=1397GN=lepBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3004638552666	2	516.292225	1030.5699	4.0857	0.0021094	2.0497	0.0010582	6.1354	0.0031676	516.2931835133608	82.238	0.97755	83.45	83.038	84.015	1.2125					76	30	5	0	0	0	0.24063	1	34483	34483		28.487	3.0875	1	7844800	+		17697	15044	8443	8481	20687	20687					0.05583511245799855
LGIFPIKKKKM	11	Unmodified	_LGIFPIKKKKM_					0	0	0		ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	435.5600158572197	3	434.949188	1301.82573	1.2596	0.00054786	-0.59185	-0.00025743	0.66775	0.00029044	434.9487933193261	94.41	0.45974	94.41	94.149	94.609	0					41	14	4	0	0	0	0.14606	1	39488	39488		0.45452	0.29519	1	9486800			17698	4886	8444	8482	20688	20688					0.18689495829357838
LGILVAFKM	9	Unmodified	_LGILVAFKM_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3055297732353	2	496.304081	990.59361	2.5557	0.0012684	-0.045546	-2.2605E-05	2.5102	0.0012458	496.30409650775204	64.931	1.1384	65.258	64.916	66.054	0.32689					52	35	2	0	0	0	0.59203	1	27058	27058		11.64	0	1	1398700	+		17699	11078	8445	8483	20689	20689					0.09793653478629949
LGILVAFKM	9	Unmodified	_LGILVAFKM_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	496.304081	990.59361	2.6865	0.0013333	1.2889	0.00063968	3.9754	0.001973	496.3048701411261	63.638	0.43538	65.583	65.345	65.78	1.9444	0.16245	0.0010186	NaN	11.64	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646970	+		17700	11078	8445	8483							0.09793653478629949
LGISATTFR	9	Unmodified	_LGISATTFR_					0	0	0			REV__nc|ENSG00000120156|Q02763-3|TEK	REV__nc|ENSG00000120156|Q02763-3|TEK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	322.5187866091728	3	322.51867	964.53418	-3.3282	-0.0010734	2.9072	0.00093762	-0.42104	-0.00013579	322.51970597337055	13.934	0.30728	13.934	13.762	14.069	0					17	9	3	0	0	0	0.42305	1	5776	5776		13.615	0	1	780780	+		17701	9565	8446	8484	20690	20690					0.05049473788801606
LGISLADLN	9	Unmodified	_LGISLADLN_					0	0	0			REV__MMP19|p.A383Lfs*24|1|0.04|ENSG00000123342|chr12:55837596-55837596|C/-|frameshift_variant	REV__MMP19|p.A383Lfs*24|1|0.04|ENSG00000123342|chr12:55837596-55837596|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2613403201103	2	458.260925	914.507297	3.568	0.0016351	1.266	0.00058017	4.8341	0.0022153	458.2611050683286	86.398	0.54626	87.525	87.147	87.694	1.1265					49	21	3	0	0	0	0.34572	1	36377	36377		23.148	1.4018	1	68529000	+		17702	14366	8447	8485	20691	20691					0.04662365177625816
LGIVALTPK	9	Unmodified	_LGIVALTPK_					0	0	0			REV__nc|ENSG00000293458|O60774|FMO6P	REV__nc|ENSG00000293458|O60774|FMO6P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5361511111259	3	304.535661	910.585153	-0.086109	-2.6223E-05	2.9236	0.00089034	2.8375	0.00086412	304.53656840872696	26.584	1.1215	27.855	27.466	28.587	1.2715					54	36	2	0	0	0	0.80152	1	11333	11333		1.9064	0.42447	1	4495300	+		17703	14576	8448	8486	20692	20692					0.12628422833643071
LGIWFVVLHWK	11	Unmodified	_LGIWFVVLHWK_					0	0	0			REV__tr|A0A7D7A1K8|A0A7D7A1K8_9CLOTTIGR03987familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15780PE=4SV=1	REV__tr|A0A7D7A1K8|A0A7D7A1K8_9CLOTTIGR03987familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15780PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6096374392509	3	466.607931	1396.80196	3.2842	0.0015324	0.027124	1.2656E-05	3.3113	0.0015451	466.6077737302514	87.191	1.6586	87.434	87.17	88.829	0.24387					94	55	3	0	0	0	1.0393	1	36581	36581		0.094841	0	1	5112000	+		17704	15828	8449	8487	20693	20693					0.11943398387211346
LGKATVEVI	9	Unmodified	_LGKATVEVI_					0	0	0		tr|A0A7D7A0G9|A0A7D7A0G9_9CLOTDNAgyrasesubunitBOS=ClostridiumintestinaleOX=36845GN=gyrBPE=3SV=1	tr|A0A7D7A0G9|A0A7D7A0G9_9CLOTDNAgyrasesubunitBOS=ClostridiumintestinaleOX=36845GN=gyrBPE=3SV=1	tr|A0A7D7A0G9|A0A7D7A0G9_9CLOTDNAgyrasesubunitBOS=ClostridiumintestinaleOX=36845GN=gyrBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2871276736259	2	465.286943	928.559333	2.0151	0.00093758	-2.7848	-0.0012957	-0.76978	-0.00035817	465.285557881948	72.126	0.47221	72.126	71.892	72.364	0					34	14	4	0	0	0	0.83753	1	30079	30079		1.8442	0	1	8413400			17705	17224	8450	8488	20694	20694					0.09219528591370363
LGKKERRPRR	10	Unmodified	_LGKKERRPRR_					0	0	0			REV__ENST00000561457.2_1_9:139008175-139008268:-|nuORF	REV__ENST00000561457.2_1_9:139008175-139008268:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.7074767947197	4	324.708731	1294.80582	-1.9363	-0.00062875	0.67979	0.00022073	-1.2566	-0.00040801	324.70862342540585	45.28	0.75286	45.28	44.872	45.625	0					44	23	2	0	0	0	0.8974	1	18994	18994		1.7423	0.63252	1	2491500	+		17706	13901	8451	8489	20695	20695					0.17020880933614535
LGKLEPHVF	9	Unmodified	_LGKLEPHVF_					0	0	0		MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B;ENST00000593411.1_1_19:17213013-17214246:+|nuORF;MYO9B-ATP13A1|1|fusion	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3017455935478	2	520.300384	1038.58622	1.595	0.00082987	0.61263	0.00031875	2.2076	0.0011486	520.3007300522208	55.139	0.65831	56.544	56.302	56.96	1.4048					72	22	4	0	0	0	0.49082	1	23019	23019		15.847	0	1	68406000			17707	1207	8452	8490	20696	20696					0.06846637202556849
LGKQRART	8	Unmodified	_LGKQRART_					0	0	0			REV__ENST00000375199.7_1_1:19570195-19571411:-|nuORF	REV__ENST00000375199.7_1_1:19570195-19571411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2862731814384	2	465.2856	928.556647	2.0151	0.00093758	0.10085	4.6925E-05	2.1159	0.0009845	465.285557881948	72.126	0.47221	72.126	71.892	72.364	0					34	14	4	0	0	0	0.88163	1	30037	30037		7.9102	0	1	8413400	+		17708	12711	8453	8491	20697	20697					0.08951117977085232
LGKQRART	8	Unmodified	_LGKQRART_					0	0	0			REV__ENST00000375199.7_1_1:19570195-19571411:-|nuORF	REV__ENST00000375199.7_1_1:19570195-19571411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2863647341728	2	465.2856	928.556647	2.4546	0.0011421	0.19666	9.1505E-05	2.6512	0.0012336	465.2855822497386	71.918	0.53703	72.243	71.914	72.451	0.32494					47	16	4	0	0	0	0.88163	1	30070	30070		7.9102	0	1	9547400	+		17709	12711	8453	8491	20698	20698					0.08951117977085232
LGKQRRML	8	Unmodified	_LGKQRRML_					0	0	0		ENST00000375972.7_1_10:27411854-27412538:-|nuORF	ENST00000375972.7_1_10:27411854-27412538:-|nuORF	ENST00000375972.7_1_10:27411854-27412538:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3072387576103	2	501.305478	1000.5964	2.0219	0.0010136	0.84465	0.00042343	2.8666	0.001437	501.3062320528158	70.118	0.38523	71.956	71.751	72.136	1.8378					24	11	3	0	0	0	0.82039	1	29425	29425		19.439	0.077054	1	1220600			17710	6186	8454	8492	20699	20699					0.09612921656150775
LGKTSINEML	10	Unmodified	_LGKTSINEML_					0	0	0			REV__nc|ENSG00000111679|P29350-2|PTPN6	REV__nc|ENSG00000111679|P29350-2|PTPN6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.7354614138603	2	553.299724	1104.5849	2.3067	0.0012763	1.6416	0.00090832	3.9484	0.0021846	553.3010534334227	85.218	0.31415	86.377	86.179	86.493	1.159					15	10	2	0	0	0	0.12493	1	35724	35724		10.824	2.2306	1	1672500	+		17711	9336	8455	8493	20700	20700					0.0367863505148307
LGKVLFPAL	9	Unmodified	_LGKVLFPAL_					0	0	0		ENST00000521663.1_1_8:58193267-58194656:+|nuORF	ENST00000521663.1_1_8:58193267-58194656:+|nuORF	ENST00000521663.1_1_8:58193267-58194656:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.3118469119072	2	479.310221	956.605889	1.6041	0.00076887	0.53636	0.00025708	2.1405	0.001026	479.31103109694834	50.047	0.21223	52.024	51.946	52.159	1.9772					12	6	2	0	0	0	0.44535	1	20970	20970		18.135	0	1	1212200			17712	7085	8456	8494	20701	20701					0.12585013213322327
LGKWPLFI	8	Unmodified	_LGKWPLFI_					0	0	0		HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|29|2|sense;chr7:150309900-150325841|313|17.65|0.29|5.94|+|0|TE_info:HERVH-int,HERVH-int_dup3022,ERV1,LTR,donor,+,150307704,150309900|None,ZBED10P|2	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|29|2|sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|29|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2993347048759	2	487.297114	972.579674	1.8173	0.00088555	2.721	0.0013259	4.5382	0.0022115	487.2983357474816	74.98	0.40849	74.98	74.745	75.154	0					29	12	3	0	0	0	0.89008	1	31220	31220		2.5775	2.5775	1	5555700			17713	281	8457	8495	20702	20702					0.09228744041843129
LGKWQKLE	8	Unmodified	_LGKWQKLE_					0	0	0		ENSG00000176142|ENST00000319172|TMEM39A;ENST00000468545.1_1_3:119155636-119156697:-|nuORF	ENSG00000176142|ENST00000319172|TMEM39A	ENSG00000176142|ENST00000319172|TMEM39A	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2943298220634	2	501.292559	1000.57057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.796	1	64.796	64.296	65.296	0								0	0	0	1.0178	1	27007	27007		2.5775	0	1				17714	4396	8458	8496	20703	20703					0.07030350685511166
LGKYFHFDTVN	11	Unmodified	_LGKYFHFDTVN_					0	0	0			REV__tr|A0A553SIW4|A0A553SIW4_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15635PE=4SV=1	REV__tr|A0A553SIW4|A0A553SIW4_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15635PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	670.8382446169853	2	670.83532	1339.65609	3.9808	0.0026705	1.7281	0.0011593	5.7089	0.0038297	670.8363429255091	87.138	0.45644	88.229	88.034	88.49	1.0918					38	14	3	0	0	0	0.88359	1	36800	36800		10.8	1.4164	1	2167800	+		17715	14869	8459	8497	20704	20704					-0.00015528919470852998
LGLAAPPV	8	Unmodified	_LGLAAPPV_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	369.2304870486259	2	369.231439	736.448326	-0.55085	-0.00020339	-2.2411	-0.00082749	-2.792	-0.0010309	369.23052196516016	75.272	0.50613	75.272	74.995	75.502	0					27	15	2	0	0	0	0.88958	1	31367	31367		2.8892	0	1	3348800	+		17716	11177	8460	8498	20705	20705					0.06955933673941672
LGLAAPPV	8	Unmodified	_LGLAAPPV_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	369.231439	736.448326	-0.55085	-0.00020339	-2.2411	-0.00082749	-2.792	-0.0010309	369.23052196516016	75.272	0.50613	75.272	74.995	75.502	0	-0.1285	0.0014251	NaN	2.8892	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3348800	+		17717	11177	8460	8498							0.06955933673941672
LGLAAPPV	8	Unmodified	_LGLAAPPV_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	369.231439	736.448326	2.3751	0.00087698	-4.5898	-0.0016947	-2.2146	-0.00081772	369.2293947305273	75.048	0.59581	75.373	75.02	75.616	0.32464	-0.027601	-0.00030929	NaN	2.8892	44	18	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3112200	+		17718	11177	8460	8498							0.06955933673941672
LGLAAPPV	8	Unmodified	_LGLAAPPV_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	369.231439	736.448326	2.4466	0.00090338	-4.5558	-0.0016821	-2.1091	-0.00077875	369.2296956133252	74.103	0.52746	75.422	75.094	75.621	1.318	0.021258	-0.00028415	NaN	2.8892	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2477000	+		17719	11177	8460	8498							0.06955933673941672
LGLAAPPV	8	Unmodified	_LGLAAPPV_					0	0	0			REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	REV__nc|ENSG00000176248|Q9UJX6-2|ANAPC2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	369.231439	736.448326	2.5601	0.00094528	-5.189	-0.0019159	-2.6288	-0.00097064	369.2292803647742	73.739	0.61459	75.535	75.193	75.808	1.7962	0.13485	-0.00075175	NaN	2.8892	42	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2138800	+		17720	11177	8460	8498							0.06955933673941672
LGLDPVIPS	9	Unmodified	_LGLDPVIPS_					0	0	0			REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.5259887576103	1	910.52441	909.517133	1.7913	0.001631	0.73942	0.00067326	2.5307	0.0023043	910.5246236051892	79.168	0.50041	79.468	79.217	79.718	0.30046					37	15	3	0	0	0	0.031324	2	33104	33104;33149		85.357	0	1	4005700	+		17721	10715	8461	8499	20706;20707	20706					0.05875553183000193
LGLDPVIPS	9	Unmodified	_LGLDPVIPS_					0	0	0			REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	910.5267822146416	1	910.52441	909.517133	2.2322	0.0020324	-0.41036	-0.00037364	1.8218	0.0016588	910.5239500676283	78.22	0.57126	79.487	79.184	79.755	1.2668					46	18	3	0	0	0	0.022807	2	32866	32770;32866		97.075	4.2525	1	8799000	+		17722	10715	8461	8499	20708;20709	20709					0.05875553183000193
LGLDPVIPS	9	Unmodified	_LGLDPVIPS_					0	0	0			REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	REV__ENST00000494005.1_1_3:49737934-49739366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	910.5267211794853	1	910.52441	909.517133	1.3061	0.0011892	-0.35221	-0.0003207	0.95389	0.00086854	910.5244982087246	77.779	0.51602	79.531	79.261	79.777	1.7514					38	16	3	0	0	0	0.042029	1	32685	32685		74.423	0	1	9192300	+		17723	10715	8461	8499	20710	20710					0.05875553183000193
LGLEVPEPV	9	Unmodified	_LGLEVPEPV_					0	0	0		tr|A0A7D6VNV8|A0A7D6VNV8_9CLOTIron-hydroxamateABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14245PE=3SV=1	tr|A0A7D6VNV8|A0A7D6VNV8_9CLOTIron-hydroxamateABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14245PE=3SV=1	tr|A0A7D6VNV8|A0A7D6VNV8_9CLOTIron-hydroxamateABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14245PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2004882693291	2	476.771126	951.527698	3.2864	0.0015668	-3.1717	-0.0015122	0.11467	5.4669E-05	476.7698915797717	81.242	0.33987	82.938	82.766	83.106	1.6959					18	10	2	0	0	0	0.11333	1	34086	34086		8.5933	3.3626	1	1581700			17724	16748	8462	8500	20711	20711					0.04999535837430358
LGLFGSPLTV	10	Unmodified	_LGLFGSPLTV_					0	0	0		nc|ENSG00000204403|Q6UXS9-3|CASP12;nc|ENSG00000204403|Q6UXS9-7|CASP12;nc|ENSG00000204403|Q6UXS9-5|CASP12;nc|ENSG00000204403|Q6UXS9-8|CASP12;nc|ENSG00000204403|Q6UXS9-6|CASP12	nc|ENSG00000204403|Q6UXS9-3|CASP12	nc|ENSG00000204403|Q6UXS9-3|CASP12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2955505251884	2	502.294768	1002.57498	2.4101	0.0012106	-1.8574	-0.00093295	0.55277	0.00027766	502.2938806457343	63.372	0.25344	63.702	63.536	63.789	0.32974					11	7	2	0	0	0	0.77604	1	26577	26577		14.838	0	1	414970			17725	7978	8463	8501	20712	20712					0.07379815108424737
LGLGLAVGL	9	Unmodified	_LGLGLAVGL_					0	0	0			REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	812.5251953005791	1	812.524016	811.516739	1.4963	0.0012157	1.0502	0.00085328	2.5464	0.002069	812.5249584054372	67.552	0.48684	68.93	68.695	69.182	1.3778					22	15	2	0	0	0	0.11074	1	28338	28338		45.75	0	1	1050100	+		17726	15336	8464	8502	20713	20713					0.10344178253808423
LGLGLAVGL	9	Unmodified	_LGLGLAVGL_					0	0	0			REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	812.524016	811.516739	1.6332	0.001327	0.18445	0.00014987	1.8177	0.0014769	812.5236814431279	69.155	0.31133	69.155	69.047	69.358	0	0.14447	-0.0003831	NaN	45.75	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	654120	+		17727	15336	8464	8502							0.10344178253808423
LGLGLAVGL	9	Unmodified	_LGLGLAVGL_					0	0	0			REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	812.524016	811.516739	1.51	0.0012269	0.23007	0.00018694	1.7401	0.0014139	812.5233797250813	68.725	0.28276	69.048	68.905	69.188	0.32224	0.03768	-0.00034603	NaN	45.75	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488720	+		17728	15336	8464	8502							0.10344178253808423
LGLGLAVGL	9	Unmodified	_LGLGLAVGL_					0	0	0			REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	812.524016	811.516739	1.4963	0.0012157	1.0502	0.00085328	2.5464	0.002069	812.5249584054372	67.552	0.48684	68.93	68.695	69.182	1.3778	-0.079976	0.00032032	NaN	45.75	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1050100	+		17729	15336	8464	8502							0.10344178253808423
LGLGLAVGL	9	Unmodified	_LGLGLAVGL_					0	0	0			REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	REV__tr|A0A7D6VNI0|A0A7D6VNI0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17940PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	812.524016	811.516739	0.9583	0.00077864	1.1125	0.00090395	2.0708	0.0016826	812.5251232121993	67.019	0.28098	68.908	68.797	69.078	1.8889	-0.10217	0.00037098	NaN	45.75	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225400	+		17730	15336	8464	8502							0.10344178253808423
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5363647341728	3	304.535661	910.585153	-0.28415	-8.6533E-05	2.0844	0.00063479	1.8003	0.00054826	304.53625129493986	21.08	0.86547	22.205	21.984	22.849	1.1254					56	28	4	0	0	0	0.70108	1	8799	8799		4.5289	0	1	16030000			17731	6188	8465	8503	20714	20714					0.1262842283366581
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5368224978447	3	304.535661	910.585153	-0.086109	-2.6223E-05	2.9236	0.00089034	2.8375	0.00086412	304.53656840872696	26.584	1.1215	27.855	27.466	28.587	1.2715					54	36	2	0	0	0	0.7849	1	11178	11178		2.2828	0	1	4495300			17732	6188	8465	8503	20715	20715					0.1262842283366581
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5365783572197	3	304.535661	910.585153	-0.34553	-0.00010523	1.9601	0.00059691	1.6145	0.00049168	304.53621774720295	18.041	0.97282	19.489	19.175	20.147	1.448					91	32	4	0	0	0	0.84195	1	7581	7581		0.86438	0	1	16690000			17733	6188	8465	8503	20716	20716					0.1262842283366581
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5354797244072	3	304.535661	910.585153	-0.2394	-7.2905E-05	1.876	0.00057132	1.6366	0.00049841	304.53622473513764	20.617	1.041	22.192	21.997	23.038	1.5748					67	34	4	0	0	0	0.70108	1	8636	8636		4.5289	0	1	9542700			17734	6188	8465	8503	20717	20717					0.1262842283366581
LGLIALSPK	9	Unmodified	_LGLIALSPK_					0	0	0		ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	ENST00000376387.4_1_13:100153672-100153861:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	304.535661	910.585153	-2.8329	-0.00086271	0.67484	0.00020551	-2.158	-0.0006572	304.53735857143283	27.859	0.72709	27.859	27.591	28.319	0	-0.052358	-0.0016953	NaN	2.2828	35	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4134400			17735	6188	8465	8503							0.1262842283366581
LGLKRLNLLR	10	Unmodified	_LGLKRLNLLR_					0	0	0			REV__nc|ENSG00000180900|Q14160|SCRIB	REV__nc|ENSG00000180900|Q14160|SCRIB	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2728149294853	3	399.27143	1194.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.035	1	68.357	67.857	68.857	0.32269								0	0	0	0.66254	1	28480	28480		0.15932	0	1		+		17736	11306	8466	8504	20718	20718					0.20285630101670904
LGLPFWAENI	10	Unmodified	_LGLPFWAENI_					0	0	0		ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	ENSG00000100739|ENST00000216629|BDKRB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3106567263603	2	580.310949	1158.60735	2.3695	0.001375	-2.7324	-0.0015856	-0.36291	-0.0002106	580.3090483329729	47.83	0.30864	49.806	49.649	49.958	1.976					14	9	2	0	0	0	0.77604	1	20023	20023		14.838	0.93222	1	831070			17737	1300	8467	8505	20719	20719					0.03438602511437239
LGLQLIYY	8	Unmodified	_LGLQLIYY_					0	0	0		nc|ENSG00000211750|A0A075B6N3|TRBV24-1	nc|ENSG00000211750|A0A075B6N3|TRBV24-1	nc|ENSG00000211750|A0A075B6N3|TRBV24-1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7849304080009	2	491.784036	981.553519	3.1848	0.0015663	-0.80905	-0.00039788	2.3758	0.0011684	491.7833163192879	113.27	0.19491	113.44	113.33	113.52	0.16914					7	5	2	0	0	0	0.87935	1	49127	49127		9.3474	0	1	444990			17738	7989	8468	8506	20720	20720					0.062004300797070755
LGLRLAVPL	9	Unmodified	_LGLRLAVPL_					0	0	0			REV__ENSG00000213892|ENST00000587331|CEACAM16	REV__ENSG00000213892|ENST00000587331|CEACAM16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.1965515017509	3	317.883172	950.627687	-2.1756	-0.00069159	1.3232	0.00042063	-0.8524	-0.00027096	317.8836552446274	43.257	1.1713	43.257	42.384	43.556	0					53	37	2	0	0	0	0.11944	1	18206	18206		0.96228	0	1	1665400	+		17739	11842	8469	8507	20721	20721					0.1503981796190601
LGLSAKLML	9	Unmodified	_LGLSAKLML_					0	0	0		ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2948181033134	2	473.293714	944.572874	3.6256	0.001716	-1.3426	-0.00063546	2.283	0.0010805	473.2935331790874	60.566	0.52605	62.531	62.324	62.85	1.9653					48	16	4	0	0	0	0.11643	1	25430	25430		43.858	3.901	1	7514400			17740	7332	8470	8508	20722	20722					0.09837063098962062
LGLSAKLML	9	Unmodified	_LGLSAKLML_					0	0	0		ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	473.293714	944.572874	2.6376	0.0012483	1.494	0.00070711	4.1316	0.0019554	473.29465900672784	62.443	0.3391	62.773	62.604	62.943	0.32974	0.031831	0.001634	NaN	43.858	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	910970			17741	7332	8470	8508							0.09837063098962062
LGLSAKLML	9	Unmodified	_LGLSAKLML_					0	0	0		ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	ENST00000560881.5_1_19:55898890-55899016:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	473.293714	944.572874	3.2548	0.0015405	-0.39634	-0.00018759	2.8585	0.0013529	473.29380581161536	61.164	0.4922	62.583	62.314	62.806	1.4196	-0.1576	-0.00015538	NaN	43.858	45	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7804800			17742	7332	8470	8508							0.09837063098962062
LGLSKTQVLSP	11	Unmodified	_LGLSKTQVLSP_					0	0	0		STX5|p.A84Lfs*32|1|0.04|ENSG00000162236|chr11:62827607-62827607|C/-|frameshift_variant;nc|ENSG00000162236|Q13190-4|STX5;ENSG00000162236|ENST00000294179|STX5	STX5|p.A84Lfs*32|1|0.04|ENSG00000162236|chr11:62827607-62827607|C/-|frameshift_variant	STX5|p.A84Lfs*32|1|0.04|ENSG00000162236|chr11:62827607-62827607|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8433715701103	2	571.842613	1141.67067	3.1569	0.0018052	-1.058	-0.000605	2.0989	0.0012002	571.8416066612473	107.51	0.13417	107.67	107.58	107.72	0.15781					15	6	3	0	0	0	0.96769	1	46271	46271		5.7319	0.43497	1	37769000			17743	3610	8471	8509	20723	20723					0.10550543228669085
LGLSRSCYSL	10	Unmodified	_LGLSRSCYSL_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL;AGL|p.K422Tfs*12|1|0.04|ENSG00000162688|chr1:99875436-99875437|-/CTCCTGAGGTTAGAATATTTGGT|frameshift_variant	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	549.2794067263603	2	549.784241	1097.55393	2.5888	0.0014233	-0.086867	-4.7758E-05	2.5019	0.0013755	549.784143516633	47.408	0.18772	49.384	49.217	49.405	1.976					8	5	2	0	0	0	0.12461	1	19813	19813		14.838	2.3067	1	1468300			17744	3639	8472	8510	20724	20724					0.009054817372543766
LGLSYKVQW	9	Unmodified	_LGLSYKVQW_					0	0	0		ENST00000562053.1_1_15:43689449-43690378:+|nuORF;ENST00000563963.1_1_15:43687726-43694213:+|nuORF;ENSG00000137822|ENST00000564079|TUBGCP4;nc|ENSG00000137822|Q9UGJ1|TUBGCP4	ENST00000562053.1_1_15:43689449-43690378:+|nuORF	ENST00000562053.1_1_15:43689449-43690378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3069335818291	2	547.305667	1092.59678	1.0794	0.00059079	1.6444	0.00089999	2.7238	0.0014908	547.3066709814207	55.345	0.34804	56.755	56.56	56.908	1.4099					26	11	3	0	0	0	0.04145	1	23184	23184		74.929	27.18	1	3520900			17745	2790	8473	8511	20725	20725					0.05418619857005069
LGLSYKVQW	9	Unmodified	_LGLSYKVQW_					0	0	0		ENST00000562053.1_1_15:43689449-43690378:+|nuORF;ENST00000563963.1_1_15:43687726-43694213:+|nuORF;ENSG00000137822|ENST00000564079|TUBGCP4;nc|ENSG00000137822|Q9UGJ1|TUBGCP4	ENST00000562053.1_1_15:43689449-43690378:+|nuORF	ENST00000562053.1_1_15:43689449-43690378:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3065063357353	2	547.305667	1092.59678	0.84715	0.00046365	1.4323	0.00078389	2.2794	0.0012475	547.3063295204222	54.914	0.3485	56.882	56.639	56.988	1.9684					24	11	3	0	0	0	0.049839	2	23022	22977;23022		68.081	26.241	1	4084000			17746	2790	8473	8511	20726;20727	20727					0.05418619857005069
LGLTRAPRRR	10	Unmodified	_LGLTRAPRRR_					0	0	0			REV__GLB1L2|p.E105Kfs*18|1|0.13|ENSG00000149328|chr11:134344415-134344415|G/-|frameshift_variant	REV__GLB1L2|p.E105Kfs*18|1|0.13|ENSG00000149328|chr11:134344415-134344415|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2511779665947	3	399.254662	1194.74216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.981	1	27.981	27.481	28.481	0								0	0	0	0.66222	1	11708	11708		0.69767	0	1		+		17747	10370	8474	8512	20728	20728					0.15257520496516008
LGLVAGILG	9	Unmodified	_LGLVAGILG_					0	0	0			REV__tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	REV__tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	812.5255615115166	1	812.524016	811.516739	1.51	0.0012269	0.23007	0.00018694	1.7401	0.0014139	812.5233797250813	68.725	0.28276	69.048	68.905	69.188	0.32224					14	8	2	0	0	0	0.24585	1	28766	28766		28.173	0	1	488720	+		17748	15266	8475	8513	20729	20729					0.10344178253819791
LGMGPGVS	8	Unmodified	_LGMGPGVS_					0	0	0		ENST00000476089.1_1_2:182321937-182323202:+|nuORF	ENST00000476089.1_1_2:182321937-182323202:+|nuORF	ENST00000476089.1_1_2:182321937-182323202:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	359.1844970583916	2	359.183632	716.352711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.88	1	103.04	102.54	103.54	0.16445								0	0	0	1.0178	1	43338	43338		2.3027	0	1				17749	6783	8476	8514	20730	20730					-0.016811625086006643
LGMNAEVK	8	Unmodified	_LGMNAEVK_					0	0	0		tr|A0A553SPP2|A0A553SPP2_NIACIHlyDfamilysecretionproteinOS=NialliacirculansOX=1397GN=CEQ21_26765PE=3SV=1	tr|A0A553SPP2|A0A553SPP2_NIACIHlyDfamilysecretionproteinOS=NialliacirculansOX=1397GN=CEQ21_26765PE=3SV=1	tr|A0A553SPP2|A0A553SPP2_NIACIHlyDfamilysecretionproteinOS=NialliacirculansOX=1397GN=CEQ21_26765PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	2	431.228571	860.442588	1.4952	0.00064476	-0.13784	-5.944E-05	1.3573	0.00058532	431.22807639734305	24.626	0.24006	25.867	25.701	25.941	1.241					11	7	2	0	0	0	2.3239	1	10325	10325		14.582	0	1	906520			17750	16477	8477	8515	20731	20731					0.006784670999650189
LGPAGKAP	8	Unmodified	_LGPAGKAP_					0	0	0		nc|ENSG00000033867|Q9Y6M7-11|SLC4A7;nc|ENSG00000033867|Q9Y6M7-14|SLC4A7;nc|ENSG00000033867|Q9Y6M7-10|SLC4A7;nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;nc|ENSG00000033867|Q9Y6M7-13|SLC4A7;nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;nc|ENSG00000033867|Q9Y6M7|SLC4A7;nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;ENSG00000033867|ENST00000454389|SLC4A7;ENST00000454389.5_2_3:27462227-27462263:-|nuORF	nc|ENSG00000033867|Q9Y6M7-11|SLC4A7	nc|ENSG00000033867|Q9Y6M7-11|SLC4A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.4193603396416	1	710.419551	709.412274	1.6918	0.0012019	-1.7055	-0.0012116	-0.013704	-9.7355E-06	710.4178956949002	58.908	0.64467	60.877	60.487	61.131	1.969					34	20	2	0	0	0	0.89176	1	24631	24631		0.79363	0	1	1796100			17751	642	8478	8516	20732	20732					0.04594476497072719
LGPHPEPVL	9	Unmodified	_LGPHPEPVL_					0	0	0		nc|ENSG00000143845|Q9NVF9-2|ETNK2	nc|ENSG00000143845|Q9NVF9-2|ETNK2	nc|ENSG00000143845|Q9NVF9-2|ETNK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	958.5315429568291	1	958.535643	957.528367	2.7676	0.0026529	-3.4622	-0.0033187	-0.6946	-0.0006658	958.5326944861058	69.963	0.2571	71.801	71.624	71.881	1.8378					11	7	2	0	0	0	0.13437	1	29346	29346		40.449	8.3316	1	2000700			17752	7886	8479	8517	20733	20733					0.04790375277127623
LGPLFSLPL	9	Unmodified	_LGPLFSLPL_					0	0	0			REV__ENST00000534617.5_1_11:66108392-66109705:-|nuORF	REV__ENST00000534617.5_1_11:66108392-66109705:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7934142947197	2	478.794404	955.574254	2.2968	0.0010997	-3.3619	-0.0016097	-1.0651	-0.00050997	478.7931023436552	49.617	0.30926	51.008	50.888	51.197	1.3911					13	9	2	0	0	0	0.3154	1	20803	20803		24.674	0	1	634790	+		17753	13731	8480	8518	20734	20734					0.09469020459368949
LGQIREKN	8	Unmodified	_LGQIREKN_					0	0	0		tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2773315310478	2	479.277441	956.540328	2.2122	0.0010603	-1.3985	-0.00067027	0.81373	0.00039	479.27669627777755	64.483	1.0819	64.483	63.832	64.914	0					60	33	2	0	0	0	0.88663	1	26808	26808		4.756	0	1	1074600			17754	16338	8481	8519	20735	20735					0.06031992020314192
LGQIREKN	8	Unmodified	_LGQIREKN_					0	0	0		tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	479.277441	956.540328	3.057	0.0014652	0.44891	0.00021515	3.5059	0.0016803	479.2775676023279	62.874	0.52082	64.288	64.075	64.596	1.4134	-0.11929	0.00095081	NaN	4.756	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	818610			17755	16338	8481	8519							0.06031992020314192
LGREDFTSL	9	Unmodified	_LGREDFTSL_					0	0	0		CON__Q3MHN5	CON__Q3MHN5	CON__Q3MHN5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1386596560478	2	519.266739	1036.51892	2.4753	0.0012853	1.3784	0.00071574	3.8536	0.0020011	519.2675457314303	57.284	0.16262	57.605	57.533	57.695	0.32103					7	5	2	0	0	0	0.11333	1	24004	24004		4.756	0	1	689290		+	17756	357	8482	8520	20736	20736					0.002125622009543804
LGRHCLLPWG	10	Unmodified	_LGRHCLLPWG_					0	0	0			REV__ENST00000495186.5_1_X:48382242-48385545:+|nuORF	REV__ENST00000495186.5_1_X:48382242-48385545:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3140136599541	2	576.310761	1150.60697	0.75242	0.00043363	3.121	0.0017987	3.8735	0.0022323	576.3125365865711	20.914	0.52868	20.914	20.631	21.16	0					34	16	3	0	0	0	0.846	1	8646	8646		7.2892	1.5574	1	1698700	+		17757	13457	8483	8521	20737	20737					0.03768904310572907
LGRLWRRL	8	Unmodified	_LGRLWRRL_					0	0	0		ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1623412966728	2	535.34071	1068.66687	1.4739	0.00078903	0.49453	0.00026474	1.9684	0.0010538	535.3409982112887	79.924	0.18885	81.641	81.537	81.726	1.7167					8	5	2	0	0	0	2.3239	1	33510	33510		2.8892	0	1	362040			17758	1046	8484	8522	20738	20738					0.1352796303613104
LGRQFYTRPPQ	11	Unmodified	_LGRQFYTRPPQ_					0	0	0			REV__chr12:54037316-54053160|287|16.48|0.17|6.56|+|0|None,HOXC4|1	REV__chr12:54037316-54053160|287|16.48|0.17|6.56|+|0|None,HOXC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.9144775271416	3	454.914083	1361.72042	1.9673	0.00089496	-0.077992	-3.548E-05	1.8893	0.00085948	454.9140370461322	39.732	0.46054	41.595	41.34	41.8	1.8624					40	14	4	0	0	0	0.90077	1	16667	16667		9.7643	0	1	3239300	+		17759	8250	8485	8523	20739	20739					0.0540267095730087
LGRRKKAPPLV	11	Unmodified	_LGRRKKAPPLV_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	412.1071349978447	3	412.275063	1233.80336	0.75096	0.0003096	-3.0723	-0.0012666	-2.3214	-0.00095705	412.2745886649224	33.761	0.050297	35.584	35.551	35.601	1.8227					6	4	2	0	0	0	0.14606	1	14150	14150		1.3296	0.11481	1	11086000			17760	2182	8486	8524	20740	20740					0.19581032475980464
LGRRRRSRRRG	11	Unmodified	_LGRRRRSRRRG_					0	0	0			REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4455444216728	2	713.445957	1424.87736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.23	1	117.39	116.89	117.89	0.15606								0	0	0	0.63775	1	50642	50642		0.35063	0	1		+		17761	12049	8487	8525	20741	20741					0.18191813410862778
LGRRRRSRRRG	11	Unmodified	_LGRRRRSRRRG_					0	0	0			REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4443237185478	2	713.445957	1424.87736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.16	1	118.32	117.82	118.82	0.16237								0	0	0	0.63775	1	51019	51019		0.35063	0	1		+		17762	12049	8487	8525	20742	20742					0.18191813410862778
LGRVHKRR	8	Unmodified	_LGRVHKRR_					0	0	0			REV__ENST00000434404.2_1_1:229406689-229407103:-|nuORF	REV__ENST00000434404.2_1_1:229406689-229407103:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3292419314384	2	511.328134	1020.64171	2.9179	0.001492	-2.9649	-0.001516	-0.046981	-2.4023E-05	511.32669990607957	80.498	0.58011	81.749	81.45	82.03	1.2512					63	18	5	0	0	0	0.89176	1	33705	33705		0.79363	0.19213	1	76868000	+		17763	13043	8488	8526	20743	20743					0.13221908233549584
LGRWGKRLL	9	Unmodified	_LGRWGKRLL_					0	0	0		ENST00000587755.1_1_18:56563722-56585517:+|nuORF	ENST00000587755.1_1_18:56563722-56585517:+|nuORF	ENST00000587755.1_1_18:56563722-56585517:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2189819216728	2	549.848368	1097.68218	5.3547	0.0029443	-0.51529	-0.00028333	4.8394	0.0026609	549.8479641642099	89.102	0.32292	90.122	89.977	90.3	1.0199					15	9	2	0	0	0	0.116	1	37593	37593		5.2307	0.90143	1	702940			17764	7461	8489	8527	20744	20744					0.1372482983331338
LGRWGKRLL	9	Unmodified	_LGRWGKRLL_					0	0	0		ENST00000587755.1_1_18:56563722-56585517:+|nuORF	ENST00000587755.1_1_18:56563722-56585517:+|nuORF	ENST00000587755.1_1_18:56563722-56585517:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2190429568291	2	549.848368	1097.68218	4.6288	0.0025451	-0.17103	-9.404E-05	4.4578	0.0024511	549.8480274822793	88.682	0.38561	90.129	89.953	90.338	1.4467					17	11	2	0	0	0	0.116	1	37408	37408		9.3474	1.4373	1	740300			17765	7461	8489	8527	20745	20745					0.1372482983331338
LGSIPNKL	8	Unmodified	_LGSIPNKL_					0	0	0			REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.2611572146416	2	421.260728	840.506903	1.2383	0.00052163	-0.74857	-0.00031534	0.4897	0.00020629	421.2603683633567	62.196	0.21937	62.196	62.149	62.368	0					10	6	2	0	0	0	0.89008	1	25936	25936		2.5775	0	1	748700	+		17766	10608	8490	8528	20746	20746					0.08026990248424681
LGSIPNKL	8	Unmodified	_LGSIPNKL_					0	0	0			REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	421.260728	840.506903	1.2383	0.00052163	-0.74857	-0.00031534	0.4897	0.00020629	421.2603683633567	62.196	0.21937	62.196	62.149	62.368	0	-0.10244	0.00026048	NaN	2.5775	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	748700	+		17767	10608	8490	8528							0.08026990248424681
LGSIPNKL	8	Unmodified	_LGSIPNKL_					0	0	0			REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	REV__ENST00000463920.5_1_1:154573515-154574721:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	421.260728	840.506903	2.2091	0.00093062	-1.7452	-0.00073517	0.46396	0.00019545	421.25988905287244	62.071	0.34524	62.401	62.229	62.574	0.32974	0.10244	-0.00057918	NaN	2.5775	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671060	+		17768	10608	8490	8528							0.08026990248424681
LGSLGAGV	8	Unmodified	_LGSLGAGV_					0	0	0			REV__nc|ENSG00000005893|P13473-2|LAMP2	REV__nc|ENSG00000005893|P13473-2|LAMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1974975466728	2	337.197596	672.38064	-2.8076	-0.00094673	2.3784	0.00080198	-0.42929	-0.00014475	337.1984100059566	14.427	1.0174	14.427	13.825	14.843	0					74	32	3	0	0	0	0.56817	1	5989	5989		42.968	0	1	3939400	+		17769	14378	8491	8529	20747	20747					0.03134483743144756
LGSLGAGV	8	Unmodified	_LGSLGAGV_					0	0	0			REV__nc|ENSG00000005893|P13473-2|LAMP2	REV__nc|ENSG00000005893|P13473-2|LAMP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	337.197596	672.38064	-2.8076	-0.00094673	2.3784	0.00080198	-0.42929	-0.00014475	337.1984100059566	14.427	1.0174	14.427	13.825	14.843	0	0	0	NaN	42.968	74	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3939400	+		17770	14378	8491	8529							0.03134483743144756
LGSLLKLSL	9	Unmodified	_LGSLLKLSL_					0	0	0		nc|ENSG00000070269|Q9NX78-3|TMEM260;TMEM260|p.V584Nfs*14|1|0.31|ENSG00000070269|chr14:56634923-56634936|TGTGGCCAATGAAG/-|frameshift_variant;ENSG00000070269|ENST00000261556|TMEM260;nc|ENSG00000070269|Q9NX78-2|TMEM260;ENST00000557657.5_1_14:57046563-57079004:+|nuORF;ENST00000557626.5_1_14:57046563-57082746:+|nuORF	nc|ENSG00000070269|Q9NX78-3|TMEM260	nc|ENSG00000070269|Q9NX78-3|TMEM260	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.3140136599541	2	472.312961	942.611368	2.7663	0.0013065	-0.66182	-0.00031258	2.1044	0.00099395	472.3126350802171	61.501	0.40001	61.831	61.641	62.041	0.32974					21	12	2	0	0	0	0.19075	1	25794	25794		34.102	1.797	1	1139000			17771	849	8492	8530	20748	20748					0.13776692005137647
LGSPLTLKQ	9	Unmodified	_LGSPLTLKQ_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.8025085330009	2	478.792392	955.570232	2.313	0.0011074	0.33529	0.00016053	2.6483	0.001268	478.79243926302763	50.611	0.63348	50.611	50.373	51.007	0					57	19	4	0	0	0	0.44535	1	21237	21237		18.135	4.6271	1	23335000			17772	4774	8493	8531	20749	20749					0.09066930965650499
LGSPRPWGK	9	Unmodified	_LGSPRPWGK_					0	0	0			REV__ENST00000305596.7_1_16:30363422-30363596:-|nuORF	REV__ENST00000305596.7_1_16:30363422-30363596:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	333.1917602419853	3	333.190776	996.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.754	1	14.481	13.981	14.981	0.72639								0	0	0	0.41705	1	5712	5712		7.1017	0.89594	1		+		17773	12334	8494	8532	20750	20750					0.05208599745560605
LGSVCWGSW	9	Unmodified	_LGSVCWGSW_					0	0	0		nc|ENSG00000198075|O75897-2|SULT1C4	nc|ENSG00000198075|O75897-2|SULT1C4	nc|ENSG00000198075|O75897-2|SULT1C4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7269775271416	2	497.726195	993.437837	1.5446	0.00076878	-2.1446	-0.0010674	-0.59998	-0.00029863	497.7251212035577	65.757	0.38743	65.757	65.482	65.87	0					38	11	4	0	0	0	0.66839	1	27332	27332		8.5933	1.304	1	3786800			17774	7968	8495	8533	20751	20751					-0.059144170427885
LGTDEIFEV	9	Unmodified	_LGTDEIFEV_					0	0	0			REV__ENST00000407916.2_1_7:55004982-55005627:+|nuORF	REV__ENST00000407916.2_1_7:55004982-55005627:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1022.50450438261	1	1022.50407	1021.49679	2.41	0.0024643	-0.51646	-0.00052809	1.8936	0.0019362	1022.5032488021966	65.157	0.40866	66.556	66.348	66.757	1.3989					31	12	3	0	0	0	0.026628	1	27342	27342		92.822	3.9185	1	4763400	+		17775	9009	8496	8534	20752	20752					-0.013096622674765968
LGTGGLLGV	9	Unmodified	_LGTGGLLGV_					0	0	0			REV__sp|F5HAQ7|UL135_HCMVMProteinUL135OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL135PE=1SV=1	REV__sp|F5HAQ7|UL135_HCMVMProteinUL135OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL135PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	786.4725829958916	1	786.47198	785.464704	0.51549	0.00040542	0.33052	0.00025995	0.84601	0.00066537	786.4722416668702	56.592	0.62979	58.56	58.303	58.933	1.9684					59	20	4	0	0	0	0.069258	1	23841	23841		60.39	6.814	1	158540000	+		17776	14637	8497	8535	20753	20753					0.0633901484004582
LGTGIIVSL	9	Unmodified	_LGTGIIVSL_					0	0	0			REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	REV__tr|A0A553SPJ4|A0A553SPJ4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_26530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	872.5468627810478	1	872.545145	871.537869	1.8191	0.0015873	-0.31291	-0.00027303	1.5062	0.0013142	872.544802912415	78.347	0.41131	78.657	78.453	78.864	0.30933					28	12	3	0	0	0	0.006164	1	32727	32727		117.6	7.9694	1	4559400	+		17777	15091	8498	8536	20754	20754					0.09696143562666748
LGTRKLGG	8	Unmodified	_LGTRKLGG_					0	0	0		ENST00000556433.5_1_14:69445007-69445439:-|nuORF	ENST00000556433.5_1_14:69445007-69445439:-|nuORF	ENST00000556433.5_1_14:69445007-69445439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	401.2514526247978	2	401.250695	800.486836	2.7264	0.001094	0.90025	0.00036122	3.6266	0.0014552	401.2508679409826	107.82	0.16906	107.98	107.92	108.08	0.15781					22	10	3	0	0	0	0.89178	1	46465	46465		0.69038	0	1	157960000			17778	7304	8499	8537	20755	20755					0.07861239308488166
LGTRKLGG	8	Unmodified	_LGTRKLGG_					0	0	0		ENST00000556433.5_1_14:69445007-69445439:-|nuORF	ENST00000556433.5_1_14:69445007-69445439:-|nuORF	ENST00000556433.5_1_14:69445007-69445439:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	401.250695	800.486836	3.1071	0.0012467	0.13269	5.3244E-05	3.2398	0.0013	401.25051864378827	107.81	0.16032	107.97	107.9	108.06	0.15796	-0.0077191	-0.00039665	NaN	0.69038	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143830000			17779	7304	8499	8537							0.07861239308488166
LGTVAENVL	9	Unmodified	_LGTVAENVL_					0	0	0			REV__KIF21B|p.H1503Afs*22|1|0.21|ENSG00000116852|chr1:200975607-200975608|-/G|frameshift_variant	REV__KIF21B|p.H1503Afs*22|1|0.21|ENSG00000116852|chr1:200975607-200975608|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2614929080009	2	458.260925	914.507297	3.568	0.0016351	1.266	0.00058017	4.8341	0.0022153	458.2611050683286	86.398	0.54626	87.525	87.147	87.694	1.1265					49	21	3	0	0	0	0.5697	1	36305	36305		12.532	0	1	68529000	+		17780	9484	8500	8538	20756	20756					0.04662365177614447
LGTVKQKSSVS	11	Unmodified	_LGTVKQKSSVS_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3307372927666	2	567.32987	1132.64519	2.4475	0.0013885	0.25797	0.00014635	2.7055	0.0015349	567.3297076976346	74.695	2.0427	75.02	74.233	76.275	0.32463					203	64	5	0	0	0	1.037	1	31397	31397		1.0715	0.46996	1	6803800	+		17781	11129	8501	8539	20757	20757					0.08417068706262398
LGTWGWPEW	9	Unmodified	_LGTWGWPEW_					0	0	0			REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2662841677666	2	566.266542	1130.51853	2.9513	0.0016712	-1.6291	-0.00092252	1.3222	0.00074871	566.2657225439408	81.149	0.25129	82.845	82.671	82.923	1.6959					11	7	2	0	0	0	0.46905	1	34028	34028		16.942	4.4107	1	535460	+		17782	13464	8502	8540	20758	20758					-0.04150812728244091
LGTWGWPEW	9	Unmodified	_LGTWGWPEW_					0	0	0			REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	566.266542	1130.51853	3.5439	0.0020068	-3.9452	-0.002234	-0.40129	-0.00022724	566.2644537212764	81.526	0.24762	82.759	82.656	82.904	1.2332	-0.042594	-0.0019754	NaN	16.942	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	548320	+		17783	13464	8502	8540							-0.04150812728244091
LGTWGWPEW	9	Unmodified	_LGTWGWPEW_					0	0	0			REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	REV__ENST00000496015.5_1_14:74759767-74762615:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	566.266542	1130.51853	2.9513	0.0016712	-1.6291	-0.00092252	1.3222	0.00074871	566.2657225439408	81.149	0.25129	82.845	82.671	82.923	1.6959	0.042594	0.00064761	NaN	16.942	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535460	+		17784	13464	8502	8540							-0.04150812728244091
LGVLIWFWV	9	Unmodified	_LGVLIWFWV_					0	0	0			REV__nc|ENSG00000100433|P57789|KCNK10	REV__nc|ENSG00000100433|P57789|KCNK10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2250244021416	3	378.223306	1131.64809	0.42607	0.00016115	-2.4103	-0.00091163	-1.9842	-0.00075048	378.22275758249947	26.965	1.3594	28.712	28.308	29.668	1.747					95	44	3	0	0	0	0.74011	1	11458	11458		5.7319	1.8555	1	1139500	+		17785	8990	8503	8541	20759	20759					0.08752988621677105
LGVLIWFWV	9	Unmodified	_LGVLIWFWV_					0	0	0			REV__nc|ENSG00000100433|P57789|KCNK10	REV__nc|ENSG00000100433|P57789|KCNK10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	378.223306	1131.64809	0.42607	0.00016115	-2.4103	-0.00091163	-1.9842	-0.00075048	378.22275758249947	26.965	1.3594	28.712	28.308	29.668	1.747	-0.065452	-0.00021764	NaN	5.7319	95	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1139500	+		17786	8990	8503	8541							0.08752988621677105
LGVMDLYK	8	Oxidation (M)	_LGVM(Oxidation (M))DLYK_		LGVM(1)DLYK		LGVM(57)DLYK	0	0	1			REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	477.7523986697197	2	477.751879	953.489204	1.2173	0.00058158	-0.69501	-0.00033204	0.52232	0.00024954	477.7518554574346	20.928	0.49669	20.928	20.755	21.252	0					41	15	4	0	0	0	0.38289	1	8691	8691		57.471	13.064	1	6436800	+		17787	15773	8504	8542	20760	20760		128			0.010599069312547726
LGVMDLYK	8	Oxidation (M)	_LGVM(Oxidation (M))DLYK_					0	0	1			REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	477.751879	953.489204	0.90547	0.00043259	1.5193	0.00072585	2.4248	0.0011584	477.75261159435064	19.773	0.28482	20.832	20.698	20.983	1.0585	-0.010957	0.0013721	NaN	57.471	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484900	+		17788	15773	8504	8542				128			0.010599069312547726
LGVMDLYK	8	Oxidation (M)	_LGVM(Oxidation (M))DLYK_					0	0	1			REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	REV__tr|A0A7D6ZY07|A0A7D6ZY07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00340PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	477.751879	953.489204	0.43393	0.00020731	1.4297	0.00068302	1.8636	0.00089033	477.7522448254326	19.259	0.28917	20.783	20.659	20.949	1.5237	-0.059477	0.0012865	NaN	57.471	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	255890	+		17789	15773	8504	8542				128			0.010599069312547726
LGVTALVSL	9	Unmodified	_LGVTALVSL_					0	0	0			REV__nc|ENSG00000220721|Q8NHA8|OR1F12P	REV__nc|ENSG00000220721|Q8NHA8|OR1F12P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	872.5476562380791	1	872.545145	871.537869	2.4149	0.0021072	0.28656	0.00025004	2.7015	0.0023572	872.5451011801132	77.335	0.44575	78.616	78.41	78.856	1.2809					31	13	3	0	0	0	0.022807	2	32463	32463;32503		97.075	0	1	11248000	+		17790	14540	8505	8543	20761;20762	20761					0.09696143562666748
LGVTWDLQ	8	Unmodified	_LGVTWDLQ_					0	0	0			REV__ENSG00000179409|ENST00000319004|GEMIN4	REV__ENSG00000179409|ENST00000319004|GEMIN4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	466.6096374392509	2	466.247818	930.481082	3.2715	0.0015253	0.72324	0.00033721	3.9947	0.0018625	466.24810018697	86.569	0.9509	86.813	86.576	87.527	0.24386					56	37	2	0	0	0	2.3239	1	36581	36581		5.2307	3.1709	1	44433000	+		17791	11278	8506	8544	20763	20763					0.013060960061352489
LGVVAPQEKPL	11	Unmodified	_LGVVAPQEKPL_					0	0	0			REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8469116091728	2	575.845156	1149.67576	1.5669	0.00090227	1.4022	0.00080745	2.9691	0.0017097	575.8459819690881	40.275	0.4487	40.275	40.041	40.49	0					31	13	3	0	0	0	0.46674	2	16834	16834;16883		24.991	3.2443	1	1070000	+		17792	12009	8507	8545	20764;20765	20764					0.10690847091291289
LGVVAPQEKPL	11	Unmodified	_LGVVAPQEKPL_					0	0	0			REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8469726443291	2	575.845156	1149.67576	1.5353	0.00088408	0.42165	0.00024281	1.9569	0.0011269	575.8453643671202	39.801	0.36677	40.113	39.797	40.164	0.31263					18	11	2	0	0	0	0.89563	1	16697	16697		10.074	2.1638	1	416130	+		17793	12009	8507	8545	20766	20766					0.10690847091291289
LGVVAPQEKPL	11	Unmodified	_LGVVAPQEKPL_					0	0	0			REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	REV__nc|ENSG00000272886|Q9NPI6-2|DCP1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	575.845156	1149.67576	1.5353	0.00088408	0.42165	0.00024281	1.9569	0.0011269	575.8453643671202	39.801	0.36677	40.113	39.797	40.164	0.31263	-0.080949	-0.00071608	NaN	24.991	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	416130	+		17794	12009	8507	8545							0.10690847091291289
LGWFSHHM	8	Unmodified	_LGWFSHHM_					0	0	0		nc|ENSG00000138795|Q9UJU2-6|LEF1;nc|ENSG00000138795|Q9UJU2-5|LEF1;nc|ENSG00000138795|Q9UJU2-7|LEF1	nc|ENSG00000138795|Q9UJU2-6|LEF1	nc|ENSG00000138795|Q9UJU2-6|LEF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.1613342165947	2	507.734354	1013.45416	3.3408	0.0016962	0.030597	1.5535E-05	3.3714	0.0017118	507.73463517874177	70.555	0.35379	71.908	71.712	72.066	1.3536					24	10	3	0	0	0	2.3239	1	29655	29655		0.79363	0	1	2013700			17795	7883	8508	8546	20767	20767					-0.05203291086036188
LGWHWAFR	8	Unmodified	_LGWHWAFR_					0	0	0		ENST00000359461.10_1_11:66052432-66055122:-|nuORF	ENST00000359461.10_1_11:66052432-66055122:-|nuORF	ENST00000359461.10_1_11:66052432-66055122:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1600829958916	2	536.777411	1071.54027	1.8397	0.00098749	0.57052	0.00030624	2.4102	0.0012937	536.7781296562578	42.111	0.23064	42.431	42.313	42.543	0.32058					12	7	2	0	0	0	2.3239	1	17637	17637		0.69038	0	1	548010			17796	6020	8509	8547	20768	20768					0.007360368109857518
LGWSVLGVQ	9	Unmodified	_LGWSVLGVQ_					0	0	0			REV__nc|ENSG00000166278|P06681-2|C2	REV__nc|ENSG00000166278|P06681-2|C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.7718078494072	2	479.77146	957.528367	2.1007	0.0010079	1.4395	0.00069062	3.5402	0.0016985	479.77196876236553	80.069	0.18764	80.069	79.978	80.165	0					8	5	2	0	0	0	0.44535	1	33347	33347		18.135	0	1	555900	+		17797	10816	8510	8548	20769	20769					0.047903752771503605
LGWWKRFTWRR	11	Unmodified	_LGWWKRFTWRR_					0	0	0			REV__ENST00000313401.3_1_17:30817050-30817605:+|nuORF	REV__ENST00000313401.3_1_17:30817050-30817605:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	531.2658569216728	3	531.29675	1590.86842	1.9401	0.0010308	0.55024	0.00029234	2.4904	0.0013231	531.6309397998293	45.706	0.60381	45.706	45.499	46.103	0					44	18	4	0	0	0	0.14606	1	19048	19048		0.08335	0	1	5059400	+		17798	12376	8511	8549	20770	20770					0.09662027001809292
LGYEECGNEIV	11	Unmodified	_LGYEECGNEIV_					0	0	0			REV__NCOA7|p.I269Lfs*24|1|0.04|ENSG00000111912|chr6:125885259-125885260|-/GTTGTTGCTTGATTGTTTTCTGTGTGTT|frameshift_variant	REV__NCOA7|p.I269Lfs*24|1|0.04|ENSG00000111912|chr6:125885259-125885260|-/GTTGTTGCTTGATTGTTTTCTGTGTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.2765380740166	2	613.273903	1224.53325	2.2136	0.0013576	0.55084	0.00033782	2.7645	0.0016954	613.2744503675422	55.476	0.14514	55.476	55.408	55.553	0					7	4	2	0	0	0	0.95124	1	23119	23119		6.7232	0.51738	1	669760	+		17799	9348	8512	8550	20771	20771					-0.07003153433083753
LGYEEVVLY	9	Unmodified	_LGYEEVVLY_					0	0	0		nc|ENSG00000183337|Q6W2J9-4|BCOR;nc|ENSG00000183337|Q6W2J9-2|BCOR;ENSG00000183337|ENST00000378444|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	nc|ENSG00000183337|Q6W2J9-4|BCOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.7812988162041	2	542.78169	1083.54883	2.2917	0.0012439	-1.0833	-0.00058798	1.2084	0.0006559	542.7804340251764	63.178	0.28242	65.123	64.965	65.248	1.9444					18	8	3	0	0	0	0.37357	1	26529	26529		21.747	0	1	1749800			17800	4648	8513	8551	20772	20772					0.010395011463060655
LGYSGTIGLI	10	Unmodified	_LGYSGTIGLI_					0	0	0			REV__ENSG00000175485|ENST00000311352|OR52W1	REV__ENSG00000175485|ENST00000311352|OR52W1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2851135134697	2	497.2844	992.554247	2.6849	0.0013351	1.1845	0.00058904	3.8694	0.0019242	497.2851992984562	55.317	0.25346	55.638	55.485	55.738	0.32088					12	7	2	0	0	0	0.32206	1	23139	23139		37.974	5.6685	1	804670	+		17801	11153	8514	8552	20773	20773					0.05767224728754172
LGYSGTIGLI	10	Unmodified	_LGYSGTIGLI_					0	0	0			REV__ENSG00000175485|ENST00000311352|OR52W1	REV__ENSG00000175485|ENST00000311352|OR52W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2856628298759	2	497.2844	992.554247	1.4341	0.00071316	2.5844	0.0012852	4.0185	0.0019983	497.2859741043353	53.981	0.28901	55.384	55.228	55.517	1.4034					16	9	2	0	0	0	0.15278	1	22612	22612		54.774	14.816	1	1793300	+		17802	11153	8514	8552	20774	20774					0.05767224728754172
LGYTGKNCQ	9	Unmodified	_LGYTGKNCQ_					0	0	0		ENSG00000134250|ENST00000256646|NOTCH2	ENSG00000134250|ENST00000256646|NOTCH2	ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2363769412041	2	492.234384	982.454216	1.9759	0.00097259	0.63999	0.00031502	2.6159	0.0012876	492.23499128736387	83.029	0.33675	83.029	82.861	83.198	0					19	10	2	0	0	0	0.68551	1	34615	34615		7.9102	2.1497	1	1111900			17803	2602	8515	8553	20775	20775					-0.037713358767064165
LHACRATR	8	Unmodified	_LHACRATR_					0	0	0			REV__ENST00000230859.7_2_5:6755057-6755249:+|nuORF	REV__ENST00000230859.7_2_5:6755057-6755249:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	464.1867553591728	2	464.250703	926.486853	1.6239	0.00075387	-0.50749	-0.0002356	1.1164	0.00051827	464.2504177515425	31.203	0.54403	31.203	30.99	31.534	0					45	17	4	0	0	0	2.3239	1	13007	13007		2.5775	0	1	13799000	+		17804	12101	8516	8554	20776	20776					0.020669160368242956
LHAHLIPC	8	Unmodified	_LHAHLIPC_					0	0	0			REV__ENST00000544194.5_1_11:63720104-63720224:+|nuORF	REV__ENST00000544194.5_1_11:63720104-63720224:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9101440310478	2	452.247098	902.479642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.895	1	66.22	65.72	66.72	0.32449								0	0	0	1.0178	1	27590	27590		0.79363	0	1		+		17805	13789	8517	8555	20777	20777					0.024501834363945818
LHARLRELL	9	Unmodified	_LHARLRELL_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2379333376884	3	374.236497	1119.68766	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.844	1	26.085	25.585	26.585	1.241								0	0	0	0.42693	1	10397	10397		1.1933	0.735	1				17806	4756	8518	8556	20778	20778					0.13260508625126022
LHASSFESS	9	Unmodified	_LHASSFESS_					0	0	0		ENSG00000118690|ENST00000392644|ARMC2	ENSG00000118690|ENST00000392644|ARMC2	ENSG00000118690|ENST00000392644|ARMC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1504089236259	3	322.150535	963.429775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.12	1	62.45	61.95	62.95	0.32974								0	0	0	0.42693	1	26026	26026		1.1933	0	1				17807	2044	8519	8557	20779	20779					-0.053402727585535104
LHAVKGTP	8	Unmodified	_LHAVKGTP_					0	0	0		ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	822.4874755740166	1	822.483214	821.475937	2.7674	0.0022761	1.3922	0.0011451	4.1597	0.0034212	822.484394519385	104.7	0.16566	104.75	104.69	104.85	0.056801					14	8	2	0	0	0	0.89176	1	44224	44224		0.79363	0	1	17944000			17808	2380	8520	8558	20780	20780					0.0580583693420067
LHAVKGTP	8	Unmodified	_LHAVKGTP_					0	0	0		ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	822.483214	821.475937	2.9732	0.0024454	-1.4884	-0.0012242	1.4848	0.0012212	822.4819854382332	104.55	0.28682	104.72	104.58	104.87	0.1731	-0.015448	-0.0011964	NaN	0.79363	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16890000			17809	2380	8520	8558							0.0580583693420067
LHCCHGCC	8	Unmodified	_LHCCHGCC_					0	0	0			REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.1449767947197	2	438.142603	874.270654	3.1841	0.0013951	2.2374	0.00098031	5.4215	0.0023754	438.1434914207412	98.725	0.19646	98.805	98.707	98.904	0.080368					17	6	4	0	0	0	0.89176	1	41342	41342		0.79363	0.10326	1	37627000	+		17810	13205	8521	8559	20781	20781					-0.1715104745520648
LHCCHGCC	8	Unmodified	_LHCCHGCC_					0	0	0			REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	438.1459838747978	2	438.142603	874.270654	3.758	0.0016466	3.0387	0.0013314	6.7967	0.0029779	438.1438254081006	98.514	0.22778	98.742	98.642	98.869	0.22776					17	7	3	0	0	0	0.89176	2	41512	41462;41512		0.79363	0.79363	1	20984000	+		17811	13205	8521	8559	20782;20783	20783					-0.1715104745520648
LHCCHGCC	8	Unmodified	_LHCCHGCC_					0	0	0			REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	REV__ENST00000462054.6_2_X:53295593-53296058:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	438.142603	874.270654	3.758	0.0016466	3.0387	0.0013314	6.7967	0.0029779	438.1438254081006	98.514	0.22778	98.742	98.642	98.869	0.22776	-0.010779	0.0002753	NaN	0.79363	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20984000	+		17812	13205	8521	8559							-0.1715104745520648
LHCEFCYWDH	10	Unmodified	_LHCEFCYWDH_					0	0	0			REV__nc|ENSG00000015171|Q15326-6|ZMYND11	REV__nc|ENSG00000015171|Q15326-6|ZMYND11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	451.1762267947197	3	451.511081	1351.51141	0.38793	0.00017515	1.2899	0.00058239	1.6778	0.00075754	451.5114902876816	11.803	0.18377	11.803	11.757	11.941	0					10	5	2	0	0	0	0.12535	1	4884	4884		6.1918	2.5992	1	6165300	+		17813	8546	8522	8560	20784	20784					-0.15028236662624295
LHDVCLVV	8	Carbamidomethyl (C)	_LHDVC(Carbamidomethyl (C))LVV_	LHDVC(1)LVV		LHDVC(43)LVV		0	1	0		nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2;ENSG00000189350|ENST00000379558|TOGARAM2	nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2	nc|ENSG00000189350|Q6ZUX3-2|TOGARAM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7590209841728	2	477.757495	953.500437	2.7124	0.0012959	-0.74638	-0.00035659	1.966	0.00093928	477.7573092631549	62.655	0.68272	64.599	64.375	65.058	1.9444					50	21	3	0	0	0	0.56817	1	26274	26274		42.968	8.7807	1	4037800			17814	4905	8523	8561	20785	20785					0.021827290254009313
LHEDKERINAN	11	Unmodified	_LHEDKERINAN_					0	0	0			REV__tr|A0A553SGD7|A0A553SGD7_NIACIFlagellarmotorproteinMotBOS=NialliacirculansOX=1397GN=motBPE=3SV=1	REV__tr|A0A553SGD7|A0A553SGD7_NIACIFlagellarmotorproteinMotBOS=NialliacirculansOX=1397GN=motBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	335.4224426150322	4	335.424471	1337.66878	-3.0071	-0.0010087	-2.8287	-0.00094882	-5.8358	-0.0019575	335.42332716482997	11.435	0.34038	11.435	11.295	11.635	0					22	10	4	0	0	0	0.89163	1	4728	4728		10.315	0.55098	1	3099600	+		17815	14742	8524	8562	20786	20786					0.01344882472790232
LHEGWPLCLRD	11	Unmodified	_LHEGWPLCLRD_					0	0	0		KIAA1755|p.F145Sfs*23|1|0.14|ENSG00000149633|chr20:38241697-38241697|A/-|frameshift_variant;ENSG00000149633|ENST00000279024|KIAA1755	KIAA1755|p.F145Sfs*23|1|0.14|ENSG00000149633|chr20:38241697-38241697|A/-|frameshift_variant	KIAA1755|p.F145Sfs*23|1|0.14|ENSG00000149633|chr20:38241697-38241697|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	446.8936645388603	3	446.89229	1337.65504	0.21148	9.4509E-05	3.1989	0.0014296	3.4104	0.0015241	446.8939557105481	11.291	0.46142	12.053	11.826	12.288	0.76165					39	14	5	0	0	0	0.66268	1	4694	4694		15.538	4.4732	1	8864000			17816	3248	8525	8563	20787	20787					-0.0002806656004850083
LHELNVFNF	9	Unmodified	_LHELNVFNF_					0	0	0		nc|ENSG00000100341|Q7Z6Z6-2|PNPLA5;ENSG00000100341|ENST00000216177|PNPLA5	nc|ENSG00000100341|Q7Z6Z6-2|PNPLA5	nc|ENSG00000100341|Q7Z6Z6-2|PNPLA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7925903201103	2	566.792924	1131.57129	2.2925	0.0012994	-2.9477	-0.0016707	-0.65525	-0.00037139	566.7913763491936	68.375	0.42538	69.753	69.583	70.009	1.3778					31	13	3	0	0	0	0.37357	1	28705	28705		21.747	8.2388	1	3956300			17817	1264	8526	8564	20788	20788					0.01077145334556917
LHERQRRKKRR	11	Unmodified	_LHERQRRKKRR_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.6576415896416	3	521.657341	1561.95019	2.129	0.0011106	-0.089468	-4.6672E-05	2.0395	0.0010639	521.6569125342382	45.264	0.72649	45.264	44.996	45.722	0					67	22	4	0	0	0	1.0402	2	18955	18955;19050		0.08335	0	1	8585900	+		17818	10451	8527	8565	20789;20790	20789					0.1916952241360832
LHERQRRKKRR	11	Unmodified	_LHERQRRKKRR_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	521.657341	1561.95019	2.129	0.0011106	-0.089468	-4.6672E-05	2.0395	0.0010639	521.6569125342382	45.264	0.72649	45.264	44.996	45.722	0	0	0	NaN	0.08335	67	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8585900	+		17819	10451	8527	8565							0.1916952241360832
LHESYSRQ	8	Unmodified	_LHESYSRQ_					0	0	0			REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.8455383181572	2	510.24888	1018.48321	2.1844	0.0011146	0.56285	0.00028719	2.7472	0.0014018	510.24887107456453	67.426	0.31196	68.804	68.665	68.977	1.3778					14	9	2	0	0	0	2.3239	1	28249	28249		9.3474	0	1	556880	+		17820	9574	8528	8566	20791	20791					-0.025294752560398592
LHESYSRQ	8	Unmodified	_LHESYSRQ_					0	0	0			REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	REV__nc|ENSG00000120669|Q9NX45-2|SOHLH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.8448669314384	2	510.24888	1018.48321	1.6065	0.00081971	0.39966	0.00020393	2.0062	0.0010236	510.24892285743255	66.974	0.30756	68.863	68.616	68.923	1.8889					11	9	2	0	0	0	2.3239	1	28040	28040		14.582	2.0501	1	292990	+		17821	9574	8528	8566	20792	20792					-0.025294752560398592
LHFFFLWKL	9	Unmodified	_LHFFFLWKL_					0	0	0		ENST00000360409.7_1_2:206659803-206659965:+|nuORF	ENST00000360409.7_1_2:206659803-206659965:+|nuORF	ENST00000360409.7_1_2:206659803-206659965:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	314.1807433962822	4	313.432573	1249.70119	-3.3134	-0.0010385	-1.4194	-0.00044489	-4.7328	-0.0014834	313.4321274157968	17.103	0.28208	17.103	16.941	17.223	0					16	8	2	0	0	0	0.11954	1	7145	7145		0.26902	0.1097	1	619420			17822	6030	8529	8567	20793	20793					0.08632366404367531
LHFILLLIAK	10	Unmodified	_LHFILLLIAK_					0	0	0			REV__ENST00000482868.1_1_9:111798484-111800393:-|nuORF	REV__ENST00000482868.1_1_9:111798484-111800393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2664977908134	3	394.265394	1179.77435	-0.34173	-0.00013473	1.6303	0.00064279	1.2886	0.00050806	394.26760816537035	31.885	0.69245	31.885	31.441	32.134	0					46	21	4	0	0	0	0.89803	1	13232	13232		0.77653	0.078866	1	1842700	+		17823	9216	8530	8568	20794	20794					0.1916549512700385
LHFIRPTL	8	Unmodified	_LHFIRPTL_					0	0	0			REV__ENST00000585090.1_1_18:3249531-3249615:+|nuORF	REV__ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.8043701052666	2	498.803094	995.591636	1.5369	0.00076661	2.0121	0.0010037	3.549	0.0017703	498.8040451178272	40.846	0.44687	40.846	40.698	41.145	0					43	13	4	0	0	0	0.88587	2	17086	17086;17122		5.2307	0	1	9971900	+		17824	14017	8531	8569	20795;20796	20795					0.0936636078505444
LHFIRPTL	8	Unmodified	_LHFIRPTL_					0	0	0			REV__ENST00000585090.1_1_18:3249531-3249615:+|nuORF	REV__ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8035461306572	2	498.803094	995.591636	0.76078	0.00037948	1.5394	0.00076787	2.3002	0.0011473	498.8038067848277	37.982	0.4593	39.802	39.64	40.099	1.8202					42	14	4	0	0	0	0.87935	1	15926	15926		9.3474	0	1	12390000	+		17825	14017	8531	8569	20797	20797					0.0936636078505444
LHFLLIIYFV	10	Unmodified	_LHFLLIIYFV_					0	0	0		nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.5930663943291	3	426.593399	1276.75837	1.6077	0.00068584	-3.2078	-0.0013684	-1.6001	-0.00068258	426.5923874632391	38.419	0.23568	39.715	39.6	39.836	1.2961					11	7	2	0	0	0	0.87472	1	16122	16122		4.1895	0.34359	1	1056400			17826	8020	8532	8570	20798	20798					0.13105788890084114
LHFLLIIYFV	10	Unmodified	_LHFLLIIYFV_					0	0	0		nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	nc|ENSG00000290724|O14609|XKRY	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	426.593399	1276.75837	0.81186	0.00034633	-2.8678	-0.0012234	-2.0559	-0.00087705	426.92689646909173	37.792	0.18312	39.612	39.486	39.67	1.8202	-0.051128	0.0002993	NaN	4.1895	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1278500			17827	8020	8532	8570							0.13105788890084114
LHFPRRLPAH	10	Unmodified	_LHFPRRLPAH_					0	0	0		ENST00000252674.8_2_19:6212687-6212918:-|nuORF	ENST00000252674.8_2_19:6212687-6212918:-|nuORF	ENST00000252674.8_2_19:6212687-6212918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2438537478447	3	415.243874	1242.70979	0.055467	2.3032E-05	0.57491	0.00023873	0.63037	0.00026176	415.2439471919378	27.351	0.42428	27.351	27.107	27.532	0					32	13	3	0	0	0	0.85617	1	11425	11425		6.1918	0	1	2145100			17828	5585	8533	8571	20799	20799					0.09814733093571704
LHFSLFVV	8	Unmodified	_LHFSLFVV_					0	0	0			REV__nc|ENSG00000119707|P49756-3|RBM25	REV__nc|ENSG00000119707|P49756-3|RBM25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2810241580009	2	481.278921	960.543289	1.6142	0.0007769	3.0912	0.0014877	4.7054	0.0022646	481.2802303911249	78.01	0.53043	79.761	79.526	80.057	1.7514					50	16	4	0	0	0	0.87803	1	32764	32764		10.183	0	1	10501000	+		17829	14416	8534	8572	20800	20800					0.061438671451583104
LHGFILLM	8	Unmodified	_LHGFILLM_					0	0	0			REV__sp|Q6SW67|GH_HCMVMEnvelopeglycoproteinHOS=Humancytomegalovirus(strainMerlin)OX=295027GN=gHPE=1SV=1	REV__sp|Q6SW67|GH_HCMVMEnvelopeglycoproteinHOS=Humancytomegalovirus(strainMerlin)OX=295027GN=gHPE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2767516970634	2	472.275324	942.536095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.427	1	32.242	31.742	32.742	1.8151								0	0	0	1.0178	1	12755	12755		0.79363	0	1		+		17830	14651	8535	8573	20801	20801					0.06252811273077441
LHGGGGAN	8	Unmodified	_LHGGGGAN_					0	0	0		ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	681.4941894412041	1	682.326713	681.319437	2.7616	0.0018843	-3.6568	-0.0024951	-0.89519	-0.00061081	682.3256132222853	104.48	0.25061	104.66	104.49	104.74	0.1731					16	12	2	0	0	0	2.3239	1	44179	44179		0	0	1	3133500			17831	5922	8536	8574	20802	20802					-0.03397028236292954
LHGGGGAN	8	Unmodified	_LHGGGGAN_					0	0	0		ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	682.326713	681.319437	1.4533	0.00099163	-0.09585	-6.5401E-05	1.3575	0.00092623	682.3279654005166	104.58	0.17016	104.58	104.49	104.66	0	-0.065509	0.0013849	NaN	0	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3220300			17832	5922	8536	8574							-0.03397028236292954
LHGGGGAN	8	Unmodified	_LHGGGGAN_					0	0	0		ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	682.326713	681.319437	2.8497	0.0019444	-2.3215	-0.0015841	0.52818	0.00036039	682.3261825703141	104.55	0.22315	104.71	104.53	104.75	0.16055	0.057221	-0.00013379	NaN	0	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5337300			17833	5922	8536	8574							-0.03397028236292954
LHHGRRQE	8	Unmodified	_LHHGRRQE_					0	0	0			REV__ENST00000546058.1_1_12:132626298-132626882:-|nuORF	REV__ENST00000546058.1_1_12:132626298-132626882:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1872131228447	3	344.853046	1031.53731	0.97029	0.00033461	0.6336	0.0002185	1.6039	0.00055311	345.1871735144237	41.419	0.91546	42.745	42.241	43.157	1.3254					45	28	2	0	0	0	0.89176	1	17343	17343		0.45834	0	1	2442800	+		17834	13806	8537	8575	20803	20803					0.022801616861897855
LHHIKILE	8	Unmodified	_LHHIKILE_					0	0	0		tr|A0A553SKN9|A0A553SKN9_NIACI4-hydroxy-3-methylbut-2-en-1-yldiphosphatesynthase(flavodoxin)OS=NialliacirculansOX=1397GN=ispGPE=3SV=1	tr|A0A553SKN9|A0A553SKN9_NIACI4-hydroxy-3-methylbut-2-en-1-yldiphosphatesynthase(flavodoxin)OS=NialliacirculansOX=1397GN=ispGPE=3SV=1	tr|A0A553SKN9|A0A553SKN9_NIACI4-hydroxy-3-methylbut-2-en-1-yldiphosphatesynthase(flavodoxin)OS=NialliacirculansOX=1397GN=ispGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8076965212822	2	501.808377	1001.6022	2.2765	0.0011424	-3.1211	-0.0015662	-0.84457	-0.00042381	501.80662193423024	78.338	1.092	78.648	78.227	79.319	0.30933					73	34	3	0	0	0	0.89051	1	32788	32788		2.3027	0	1	2355400			17835	16298	8538	8576	20804	20804					0.10146343439464545
LHHIRRLG	8	Unmodified	_LHHIRRLG_					0	0	0		ENST00000499023.6_1_4:155471502-155471580:-|nuORF	ENST00000499023.6_1_4:155471502-155471580:-|nuORF	ENST00000499023.6_1_4:155471502-155471580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3112365603447	2	501.30941	1000.60427	2.0504	0.0010279	0.069769	3.4976E-05	2.1202	0.0010629	501.3096474230134	91.646	0.47856	91.646	91.436	91.915	0					33	14	3	0	0	0	0.89178	1	38331	38331		0.69038	0	1	2708200			17836	6970	8539	8577	20805	20805					0.10398816967938274
LHHKKKLKKKK	11	Unmodified	_LHHKKKLKKKK_					0	0	0		AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	708.4870483279228	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.09	1	106.25	105.75	106.75	0.15781								0	0	0	0.63775	1	45346	45346		0.35063	0.35063	1				17837	45	8540	8578	20806	20806					0.2703753173518635
LHHKKKLKKKK	11	Unmodified	_LHHKKKLKKKK_					0	0	0		AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	708.4924194216728	2	708.487905	1414.96126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.38	1	109.54	109.04	110.04	0.1548								0	0	0	0.63775	1	47419	47419		0.30703	0	1				17838	45	8540	8578	20807	20807					0.2703753173518635
LHHLDTLLIR	10	Unmodified	_LHHLDTLLIR_					0	0	0			REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8702270388603	2	615.869497	1229.72444	2.943	0.0018125	-0.9499	-0.00058502	1.9931	0.0012275	615.8684863261775	107.41	0.13438	107.57	107.51	107.64	0.15781					16	6	3	0	0	0	0.88022	1	46204	46204		3.5965	1.098	1	16648000	+		17839	14906	8541	8579	20808	20808					0.11876760451036716
LHHLDTLLIR	10	Unmodified	_LHHLDTLLIR_					0	0	0			REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	615.4557372927666	2	615.869497	1229.72444	3.0661	0.0018883	0.24357	0.00015001	3.3097	0.0020383	615.8704430323273	107.4	0.1907	107.56	107.43	107.62	0.15795					17	9	3	0	0	0	0.12545	1	46142	46142		3.5965	0.31518	1	12854000	+		17840	14906	8541	8579	20809	20809					0.11876760451036716
LHHLDTLLIR	10	Unmodified	_LHHLDTLLIR_					0	0	0			REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	615.869497	1229.72444	1.5499	0.00095451	0.72299	0.00044527	2.2728	0.0013998	615.8697797861093	107.48	0.12045	107.48	107.39	107.51	0	-0.057098	0.00093486	NaN	3.5965	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4763000	+		17841	14906	8541	8579							0.11876760451036716
LHHLDTLLIR	10	Unmodified	_LHHLDTLLIR_					0	0	0			REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	REV__tr|A0A553SJI4|A0A553SJI4_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16815PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	615.869497	1229.72444	2.943	0.0018125	-0.9499	-0.00058502	1.9931	0.0012275	615.8684863261775	107.41	0.13438	107.57	107.51	107.64	0.15781	0.0356	-0.0011257	NaN	3.5965	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16648000	+		17842	14906	8541	8579							0.11876760451036716
LHHRAPVRRP	10	Unmodified	_LHHRAPVRRP_					0	0	0			REV__ATP2B3|p.K912Qfs*72|1|0.12|ENSG00000067842|chrX:153559836-153559837|-/C|frameshift_variant	REV__ATP2B3|p.K912Qfs*72|1|0.12|ENSG00000067842|chrX:153559836-153559837|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8712646365166	2	619.870697	1237.72684	2.5785	0.0015983	-2.0392	-0.001264	0.53931	0.0003343	619.8691219566941	93.731	0.3822	93.876	93.654	94.036	0.14494					28	11	3	0	0	0	0.89803	1	39188	39188		1.6526	0	1	1276100	+		17843	8149	8542	8580	20810	20810					0.11748653699351053
LHHRLVYKRLH	11	Unmodified	_LHHRLVYKRLH_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SC5D|p.F213Lfs*6|1|0.07|ENSG00000109929|chr11:121307247-121307263|ATTTTCGTGTCCCCCAA/-|frameshift_variant	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2997619509697	3	491.29675	1470.86842	3.4269	0.0016836	3.2314	0.0015876	6.6583	0.0032712	491.29839206199637	97.981	0.13407	98.072	97.999	98.133	0.090881					14	4	5	0	0	0	1.0388	1	40993	40993		0.50596	0	1	20727000			17844	1686	8543	8581	20811	20811					0.15182027001833376
LHHRYPEN	8	Unmodified	_LHHRYPEN_					0	0	0		ENST00000373055.5_1_1:38174330-38174495:+|nuORF	ENST00000373055.5_1_1:38174330-38174495:+|nuORF	ENST00000373055.5_1_1:38174330-38174495:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699645876884	3	355.845669	1064.51518	-2.199	-0.00078252	3.9086	0.0013908	1.7095	0.00060832	355.84610210266266	14.852	0.18635	14.852	14.75	14.936	0					7	5	2	0	0	0	2.3239	1	6139	6139		1.8442	0	1	124460			17845	6153	8544	8582	20812	20812					-0.014500627822371825
LHIAILAG	8	Unmodified	_LHIAILAG_					0	0	0			REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2614318728447	2	404.257988	806.501424	3.1234	0.0012627	4.099	0.001657	7.2224	0.0029197	404.25946400909413	109.44	0.30902	109.59	109.47	109.77	0.1548					30	12	3	0	0	0	0.89176	1	47479	47479		0.79363	0	1	10721000	+		17846	8195	8545	8583	20813	20813					0.09043311456628089
LHIAILAG	8	Unmodified	_LHIAILAG_					0	0	0			REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	404.257988	806.501424	2.7803	0.0011239	3.8928	0.0015737	6.673	0.0026976	404.2596259977751	109.46	0.30236	109.62	109.48	109.78	0.15898	0.01203	-6.9067E-05	NaN	0.79363	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13189000	+		17847	8195	8545	8583							0.09043311456628089
LHIAILAG	8	Unmodified	_LHIAILAG_					0	0	0			REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	REV__CDH18|p.L620H|1|0.43|ENSG00000145526|chr5:19483324-19483324|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	404.257988	806.501424	3.1234	0.0012627	4.099	0.001657	7.2224	0.0029197	404.25946400909413	109.44	0.30902	109.59	109.47	109.77	0.1548	-0.01203	9.7666E-05	NaN	0.79363	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10721000	+		17848	8195	8545	8583							0.09043311456628089
LHIEDLIIL	9	Unmodified	_LHIEDLIIL_					0	0	0			REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8318359255791	2	539.828975	1077.6434	2.8457	0.0015362	2.3672	0.0012779	5.2129	0.0028141	539.8305071818128	76.03	0.31406	77.798	77.658	77.972	1.7672					16	9	2	0	0	0	0.086433	1	31897	31897		60.39	0	1	2384000	+		17849	10231	8546	8584	20814	20814					0.10768059688302856
LHIEDLIIL	9	Unmodified	_LHIEDLIIL_					0	0	0			REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	539.828975	1077.6434	1.634	0.00088208	3.8033	0.0020531	5.4373	0.0029352	539.8316809691858	78.128	0.21896	78.128	78.001	78.22	0	0.19791	0.0010701	NaN	60.39	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634520	+		17850	10231	8546	8584							0.10768059688302856
LHIEDLIIL	9	Unmodified	_LHIEDLIIL_					0	0	0			REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	REV__SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	539.828975	1077.6434	2.8457	0.0015362	2.3672	0.0012779	5.2129	0.0028141	539.8305071818128	76.03	0.31406	77.798	77.658	77.972	1.7672	-0.13255	-0.00048033	NaN	60.39	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2384000	+		17851	10231	8546	8584							0.10768059688302856
LHIKPPEQ	8	Unmodified	_LHIKPPEQ_					0	0	0			REV__ENSG00000086967|ENST00000357701|MYBPC2	REV__ENSG00000086967|ENST00000357701|MYBPC2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	480.8020507693291	2	481.276909	960.539266	1.9542	0.00094049	1.302	0.00062662	3.2562	0.0015671	481.27689063890017	79.251	0.24515	79.251	79.113	79.359	0					19	7	3	0	0	0	2.3239	1	32975	32975		2.5775	0.51773	1	3927900	+		17852	8863	8547	8585	20815	20815					0.05741777651417124
LHIRKRILLY	10	Unmodified	_LHIRKRILLY_					0	0	0			REV__nc|ENSG00000279980|Q9BY60|GABARAPL3	REV__nc|ENSG00000279980|Q9BY60|GABARAPL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	662.9322997927666	2	662.932431	1323.85031	2.9717	0.00197	-2.7132	-0.0017987	0.25852	0.00017138	662.9303524805583	105.87	0.15476	106.03	105.94	106.1	0.15859					26	7	5	0	0	0	0.89803	1	45176	45176		1.6526	0.32309	1	259510000	+		17853	14564	8548	8586	20816	20816					0.20133892027138245
LHITKRLVPT	10	Unmodified	_LHITKRLVPT_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.2544738650322	3	393.252036	1176.73428	0.60034	0.00023608	3.8387	0.0015096	4.4391	0.0017457	393.2536747264639	29.233	0.33618	31.032	30.868	31.204	1.7987					19	10	2	0	0	0	0.8974	1	12249	12249		1.7423	0.7287	1	550850	+		17854	8971	8549	8587	20817	20817					0.15297948456418453
LHITKRLVPT	10	Unmodified	_LHITKRLVPT_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	393.252036	1176.73428	1.2115	0.00047642	3.7598	0.0014786	4.9713	0.001955	393.25357508368785	31.025	0.35887	31.316	31.149	31.508	0.29086	0.20377	-0.00013679	NaN	1.7423	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515620	+		17855	8971	8549	8587							0.15297948456418453
LHITKRLVPT	10	Unmodified	_LHITKRLVPT_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	393.252036	1176.73428	0.2975	0.00011699	4.3777	0.0017216	4.6752	0.0018385	393.2536305675551	29.707	0.30806	30.99	30.826	31.134	1.2825	-0.12291	0.00059218	NaN	1.7423	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	860090	+		17856	8971	8549	8587							0.15297948456418453
LHITKRLVPT	10	Unmodified	_LHITKRLVPT_					0	0	0			REV__ENSG00000100167|ENST00000644076|SEPTIN3	REV__ENSG00000100167|ENST00000644076|SEPTIN3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	393.252036	1176.73428	0.60034	0.00023608	3.8387	0.0015096	4.4391	0.0017457	393.2536747264639	29.233	0.33618	31.032	30.868	31.204	1.7987	-0.080866	-4.3706E-05	NaN	1.7423	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550850	+		17857	8971	8549	8587							0.15297948456418453
LHKASTLM	8	Unmodified	_LHKASTLM_					0	0	0		ENSG00000260220|ENST00000638797|CCDC187;nc|ENSG00000260220|A0A096LP49-2|CCDC187;nc|ENSG00000260220|A0A096LP49|CCDC187	ENSG00000260220|ENST00000638797|CCDC187	ENSG00000260220|ENST00000638797|CCDC187	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7555114626884	2	450.752213	899.489873	2.7886	0.001257	2.9584	0.0013335	5.747	0.0025905	450.75362588440214	75.444	0.43226	76.75	76.555	76.987	1.3063					44	13	4	0	0	0	0.88958	1	31644	31644		2.8892	0	1	14789000			17858	5417	8550	8588	20818	20818					0.03610746370986817
LHKEIRKKK	9	Unmodified	_LHKEIRKKK_					0	0	0		nc|ENSG00000189221|P21397-2|MAOA;ENSG00000189221|ENST00000338702|MAOA	nc|ENSG00000189221|P21397-2|MAOA	nc|ENSG00000189221|P21397-2|MAOA	MSMS	GG20161007_CRH_Patient100_W632_01	3	590.3893310427666	2	590.387857	1178.76116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.93	1	108.09	107.59	108.59	0.15781								0	0	0	0.42693	1	46558	46558		2.0598	0	1				17859	4900	8551	8589	20819	20819					0.17893057067590235
LHKLYRCLH	9	Unmodified	_LHKLYRCLH_					0	0	0			REV__ENST00000262424.9_1_16:84914153-84922894:+|nuORF	REV__ENST00000262424.9_1_16:84914153-84922894:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5574828982353	3	394.890332	1181.64917	1.2658	0.00049985	1.59	0.00062787	2.8558	0.0011277	394.891410884556	42.596	0.90931	43.936	43.23	44.14	1.3399					43	28	2	0	0	0	0.11799	1	17682	17682		2.9952	0	1	1064500	+		17860	12196	8552	8590	20820	20820					0.06560879718949764
LHKSMTLA	8	Unmodified	_LHKSMTLA_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7550231814384	2	450.752213	899.489873	2.8091	0.0012662	1.8172	0.00081909	4.6263	0.0020853	450.75354052120446	76.246	0.39964	76.568	76.422	76.822	0.32163					31	12	4	0	0	0	0.89008	1	31929	31929		2.5775	0	1	9047900	+		17861	11375	8553	8591	20821	20821					0.03610746370986817
LHKSVEWH	8	Unmodified	_LHKSVEWH_					0	0	0			REV__ENSG00000005812|ENST00000355619|FBXL3	REV__ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.1848937869072	3	345.850531	1034.52976	-0.32398	-0.00011205	1.1238	0.00038868	0.79986	0.00027663	346.18540806465165	13.322	0.81189	14.15	13.799	14.61	0.82789					45	29	2	0	0	0	0.88409	1	5595	5595		4.3292	0	1	909570	+		17862	8502	8554	8592	20822	20822					0.013880093659054182
LHKVWKKKL	9	Unmodified	_LHKVWKKKL_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133235217-133253139:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MSMS	GG20161007_CRH_Patient100_A02_02	2	590.3909179568291	2	590.389868	1178.76518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.81	1	104.87	104.37	105.37	0.056801								0	0	0	0.42693	1	44295	44295		0.52476	0	1				17863	4433	8555	8593	20823	20823					0.1829514656133142
LHKWKLLPFRI	11	Unmodified	_LHKWKLLPFRI_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|205|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|205|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|205|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2531310915947	4	363.481592	1449.89726	0.39219	0.00014256	-1.0153	-0.00036904	-0.62309	-0.00022648	363.48131044188415	28.484	0.72524	30.259	30.061	30.787	1.7754					34	23	2	0	0	0	0.14606	1	11917	11917		0.50596	0.41111	1	1281700			17864	7620	8556	8594	20824	20824					0.19030751578247873
LHKWSIRRR	9	Unmodified	_LHKWSIRRR_					0	0	0		ENST00000472883.1_1_9:123290187-123301393:-|nuORF	ENST00000472883.1_1_9:123290187-123301393:-|nuORF	ENST00000472883.1_1_9:123290187-123301393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9234496951103	3	417.923024	1250.74724	4.0522	0.0016935	-2.4041	-0.0010047	1.6481	0.00068876	417.9216999146048	93.625	0.54105	94.496	94.226	94.767	0.87176					51	16	4	0	0	0	0.8462	1	39388	39388		1.0715	0.3738	1	8998200			17865	6762	8557	8595	20825	20825					0.1318982435916496
LHKWSIRRR	9	Unmodified	_LHKWSIRRR_					0	0	0		ENST00000472883.1_1_9:123290187-123301393:-|nuORF	ENST00000472883.1_1_9:123290187-123301393:-|nuORF	ENST00000472883.1_1_9:123290187-123301393:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	417.923024	1250.74724	3.2346	0.0013518	-1.4629	-0.00061137	1.7718	0.00074046	417.9221265278933	93.288	0.53644	94.565	94.26	94.797	1.277	0.10988	-0.00026038	NaN	1.0715	55	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12902000			17866	6762	8557	8595							0.1318982435916496
LHKYLLLRSV	10	Unmodified	_LHKYLLLRSV_					0	0	0		L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|219|2|anti-sense;L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|174|3|anti-sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|219|2|anti-sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|219|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.5984680056572	3	414.595802	1240.76558	3.9593	0.0016415	2.3681	0.00098182	6.3275	0.0026233	414.59670084319845	91.709	0.45844	92.645	92.372	92.83	0.93623					48	14	4	0	0	0	0.89803	1	38666	38666		0.62683	0	1	9027400			17867	7744	8558	8596	20826	20826					0.15482521490503132
LHLAGALV	8	Unmodified	_LHLAGALV_					0	0	0		ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	793.4947997927666	1	793.49305	792.485774	2.6995	0.002142	0.070826	5.62E-05	2.7703	0.0021982	793.4930096986104	107.75	0.38068	107.91	107.66	108.04	0.15781					26	20	2	0	0	0	0.89176	1	46439	46439		0.79363	0	1	44273000			17868	6106	8559	8597	20827	20827					0.08123024939573043
LHLAGALV	8	Unmodified	_LHLAGALV_					0	0	0		ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	793.49305	792.485774	1.292	0.0010252	1.1048	0.00087662	2.3968	0.0019018	793.4940759356207	107.8	0.38486	107.8	107.57	107.95	0	-0.066391	0.00067407	NaN	0.79363	26	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14107000			17869	6106	8559	8597							0.08123024939573043
LHLAGALV	8	Unmodified	_LHLAGALV_					0	0	0		ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	793.49305	792.485774	2.7503	0.0021823	0.15953	0.00012659	2.9098	0.0023089	793.4935692167468	107.82	0.21342	107.87	107.75	107.97	0.052452	0.0040587	-7.5956E-05	NaN	0.79363	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12380000			17870	6106	8559	8597							0.08123024939573043
LHLAGALV	8	Unmodified	_LHLAGALV_					0	0	0		ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	ENST00000370033.8_1_10:103717452-103735012:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	793.49305	792.485774	2.8653	0.0022736	-0.17934	-0.00014231	2.686	0.0021313	793.4928929022097	107.73	0.24008	107.89	107.77	108.01	0.15795	0.024424	-0.00034485	NaN	0.79363	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45753000			17871	6106	8559	8597							0.08123024939573043
LHLGLIPRF	9	Unmodified	_LHLGLIPRF_					0	0	0			REV__ENST00000533687.1_1_11:118971334-118971544:-|nuORF	REV__ENST00000533687.1_1_11:118971334-118971544:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0698425173759	3	355.890438	1064.64948	0.75919	0.00027019	0.92166	0.00032801	1.6809	0.0005982	356.22509301943404	28.839	0.39822	29.118	28.861	29.26	0.2793					14	12	2	0	0	0	0.11954	1	12075	12075		0.26902	0	1	206750	+		17872	11061	8560	8598	20828	20828					0.11974622710454241
LHLIPHHL	8	Unmodified	_LHLIPHHL_					0	0	0		ENST00000290881.11_1_16:67217371-67217884:-|nuORF	ENST00000290881.11_1_16:67217371-67217884:-|nuORF	ENST00000290881.11_1_16:67217371-67217884:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.2003356814384	3	327.199383	978.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.976	1	28.248	27.748	28.748	1.2715								0	0	0	1.0178	1	11300	11300		1.8442	0	1				17873	5721	8561	8599	20829	20829					0.08617493987844682
LHLIVAVMTKV	11	Unmodified	_LHLIVAVMTKV_					0	0	0			REV__ENST00000562567.6_1_16:68267161-68268061:-|nuORF	REV__ENST00000562567.6_1_16:68267161-68268061:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	307.1151916384697	4	306.694064	1222.74715	-0.32879	-0.00010084	0.76431	0.00023441	0.43552	0.00013357	306.9447657388536	29.143	0.27199	30.425	30.282	30.554	1.2825					12	8	2	0	0	0	0.14606	1	12273	12273		0.094841	0	1	561510	+		17874	9094	8562	8600	20830	20830					0.14468643524264735
LHLKLNRV	8	Unmodified	_LHLKLNRV_					0	0	0			REV__nc|ENSG00000235944|A8K554|ZNF815P	REV__nc|ENSG00000235944|A8K554|ZNF815P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.8216430544853	2	496.821818	991.629084	1.7741	0.00088139	-2.2563	-0.001121	-0.48222	-0.00023958	496.8207092466822	42.665	1.0345	44.587	44.227	45.262	1.9211					41	33	2	0	0	0	0.88958	1	18032	18032		2.8892	0	1	2203700	+		17875	14546	8563	8601	20831	20831					0.13293452050641008
LHLKRQPKR	9	Unmodified	_LHLKRQPKR_					0	0	0		ENSG00000008853|ENST00000251822|RHOBTB2;nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2;nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2	ENSG00000008853|ENST00000251822|RHOBTB2	ENSG00000008853|ENST00000251822|RHOBTB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3806640505791	2	588.377823	1174.74109	3.1821	0.0018723	0.79443	0.00046743	3.9765	0.0023397	588.37812869413	107.41	0.20833	107.57	107.47	107.68	0.15781					38	10	4	0	0	0	0.84963	1	46176	46176		0.6015	0	1	426910000			17876	534	8564	8602	20832	20832					0.16071306127651042
LHLKRQPKR	9	Unmodified	_LHLKRQPKR_					0	0	0		ENSG00000008853|ENST00000251822|RHOBTB2;nc|ENSG00000008853|Q9BYZ6-3|RHOBTB2;nc|ENSG00000008853|Q9BYZ6-2|RHOBTB2	ENSG00000008853|ENST00000251822|RHOBTB2	ENSG00000008853|ENST00000251822|RHOBTB2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	588.377823	1174.74109	3.2385	0.0019055	0.61149	0.00035979	3.85	0.0022652	588.3780239059452	107.43	0.22703	107.59	107.45	107.68	0.15795	0.0077944	-0.00010182	NaN	0.6015	36	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307610000			17877	534	8564	8602							0.16071306127651042
LHLLDLLKKKR	11	Unmodified	_LHLLDLLKKKR_					0	0	0			REV__SPTA1|p.L1630Afs*42|1|0.08|ENSG00000163554|chr1:158639675-158639676|-/T|frameshift_variant	REV__SPTA1|p.L1630Afs*42|1|0.08|ENSG00000163554|chr1:158639675-158639676|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	688.9607421755791	2	688.958646	1375.90274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.012	1	98.24	97.74	98.74	0.22776								0	0	0	0.63775	1	41249	41249		1.4819	0.15237	1		+		17878	10692	8565	8603	20833	20833					0.22982430370052498
LHLLHRHRRRL	11	Unmodified	_LHLLHRHRRRL_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF;nc|ENSG00000110719|Q13488-2|TCIRG1;ENSG00000110719|ENST00000265686|TCIRG1	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	753.9733764529228	2	753.971277	1505.928	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.028	1	98.028	97.528	98.528	0								0	0	0	0.63775	1	40986	40986		0.35063	0.043601	1				17879	7180	8566	8604	20834	20834					0.19527342735864295
LHLPVPNR	8	Unmodified	_LHLPVPNR_					0	0	0			REV__ENST00000373095.5_1_9:130742406-130742700:-|nuORF	REV__ENST00000373095.5_1_9:130742406-130742700:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2869140505791	2	473.285069	944.555585	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.61	1	46.57	46.07	47.07	1.9596								0	0	0	1.0178	1	18697	18697		2.5775	0	1		+		17880	12689	8567	8605	20835	20835					0.08108903608172113
LHLQLTSL	8	Unmodified	_LHLQLTSL_					0	0	0			REV__ENST00000513146.1_1_5:180681739-180687184:-|nuORF	REV__ENST00000513146.1_1_5:180681739-180687184:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1463195681572	2	462.779285	923.544017	2.0439	0.00094586	-0.17416	-8.0596E-05	1.8697	0.00086527	462.7793296382084	48.11	0.28506	49.498	49.333	49.618	1.388					12	8	2	0	0	0	2.3239	1	20133	20133		6.3541	0	1	941370	+		17881	13586	8568	8606	20836	20836					0.0791866179419003
LHLRKTIIK	9	Unmodified	_LHLRKTIIK_					0	0	0			REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3799316287041	2	561.3795	1120.74445	2.6711	0.0014995	-1.8612	-0.0010449	0.80988	0.00045465	561.3781090306657	106.04	0.12865	106.1	106.02	106.15	0.05455					17	5	4	0	0	0	0.83213	1	45087	45087		2.0598	0	1	115680000	+		17882	13084	8569	8607	20837	20837					0.1889055618164548
LHLRKTIIK	9	Unmodified	_LHLRKTIIK_					0	0	0			REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	REV__ENST00000441072.3_1_12:75057561-75057783:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	561.3795	1120.74445	2.6711	0.0014995	-1.8612	-0.0010449	0.80988	0.00045465	561.3781090306657	106.04	0.12865	106.1	106.02	106.15	0.05455	-0.033982	0.00036923	NaN	2.0598	17	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115680000	+		17883	13084	8569	8607							0.1889055618164548
LHLSRNRRILH	11	Unmodified	_LHLSRNRRILH_					0	0	0		ENST00000554562.1_1_14:94563300-94568322:+|nuORF	ENST00000554562.1_1_14:94563300-94568322:+|nuORF	ENST00000554562.1_1_14:94563300-94568322:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0698730349541	4	354.46801	1413.84293	0.28435	0.00010079	1.7045	0.00060418	1.9888	0.00070498	354.46895518599337	27.257	0.15474	29.004	28.957	29.112	1.747					6	4	2	0	0	0	0.14606	1	11410	11410		0.094841	0	1	270160			17884	7291	8570	8608	20838	20838					0.1525655247942268
LHLVPPLT	8	Unmodified	_LHLVPPLT_					0	0	0			REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF	REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.2933227419853	2	445.278921	888.543289	3.2535	0.0014487	-3.7066	-0.0016505	-0.45313	-0.00020177	445.27799363016305	106.19	0.37074	106.25	106.19	106.56	0.05455					24	17	3	0	0	0	2.3239	1	45159	45159		0.79363	0	1	6137600	+		17885	11534	8571	8609	20839	20839					0.09455867145118191
LHLVPPLT	8	Unmodified	_LHLVPPLT_					0	0	0			REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF	REV__ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	445.278921	888.543289	0.97762	0.00043531	-0.119	-5.2989E-05	0.85862	0.00038233	445.2787514653076	106.24	0.092804	106.24	106.17	106.26	0	-0.0042356	0.00054064	NaN	0.79363	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5981600	+		17886	11534	8571	8609							0.09455867145118191
LHLVQLIMLQ	10	Unmodified	_LHLVQLIMLQ_					0	0	0			REV__ENSG00000154227|ENST00000679737|CERS3	REV__ENSG00000154227|ENST00000679737|CERS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3669921755791	2	604.365201	1206.71585	4.1403	0.0025023	-0.21449	-0.00012963	3.9258	0.0023726	604.3649108052708	91.725	0.49023	92.662	92.34	92.83	0.93623					41	15	4	0	0	0	0.89803	1	38608	38608		1.6526	0	1	13776000	+		17887	10464	8572	8610	20840	20840					0.12076070490184065
LHLWVMIVL	9	Unmodified	_LHLWVMIVL_					0	0	0		ENSG00000066455|ENST00000163416|GOLGA5	ENSG00000066455|ENST00000163416|GOLGA5	ENSG00000066455|ENST00000163416|GOLGA5	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3381835818291	2	562.338455	1122.66236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.183	1	45.51	45.01	46.01	0.32674								0	0	0	0.39421	1	18972	18972		9.3474	3.6156	1				17888	806	8573	8611	20841	20841					0.10593317778329947
LHMKGILKLQ	10	Unmodified	_LHMKGILKLQ_					0	0	0		ENSG00000148488|ENST00000377602|ST8SIA6	ENSG00000148488|ENST00000377602|ST8SIA6	ENSG00000148488|ENST00000377602|ST8SIA6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8682128787041	2	590.865369	1179.71618	2.5245	0.0014916	1.8923	0.0011181	4.4168	0.0026097	590.8664019291784	90.331	0.68983	90.541	90.242	90.932	0.20904					79	21	5	0	0	0	0.89803	1	37813	37813		0.45834	0	1	65375000			17889	3214	8574	8612	20842	20842					0.13351490210061456
LHMKGILKLQ	10	Unmodified	_LHMKGILKLQ_					0	0	0		ENSG00000148488|ENST00000377602|ST8SIA6	ENSG00000148488|ENST00000377602|ST8SIA6	ENSG00000148488|ENST00000377602|ST8SIA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8693725466728	2	590.865369	1179.71618	5.1291	0.0030306	2.0323	0.0012008	7.1614	0.0042314	590.8664036490337	89.669	0.52937	90.689	90.397	90.926	1.0199					66	16	5	0	0	0	0.89803	1	37764	37764		0.45834	0	1	29315000			17890	3214	8574	8612	20843	20843					0.13351490210061456
LHNIESPML	9	Unmodified	_LHNIESPML_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	527.9138061404228	2	527.273509	1052.53247	1.9257	0.0010154	-1.5213	-0.00080212	0.40446	0.00021326	527.2716350013266	43.119	0.27298	43.119	42.968	43.241	0					13	8	2	0	0	0	0.082477	1	18041	18041		32.305	0	1	385510	+		17891	11510	8575	8613	20844	20844					0.008300967085460798
LHNIESPML	9	Unmodified	_LHNIESPML_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2724487185478	2	527.273509	1052.53247	2.3464	0.0012372	-1.309	-0.00069018	1.0374	0.00054701	527.2727533692406	40.995	0.47205	42.321	42.084	42.556	1.3254					40	14	4	0	0	0	0.13873	1	17150	17150		39.957	0	1	3843800	+		17892	11510	8575	8613	20845	20845					0.008300967085460798
LHNIESPML	9	Unmodified	_LHNIESPML_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2741577029228	2	527.273509	1052.53247	2.2348	0.0011783	-1.4509	-0.00076503	0.78387	0.00041331	527.2728878541816	40.564	0.44106	42.427	42.233	42.675	1.8624					40	13	4	0	0	0	0.20671	1	17070	17070		32.305	0	1	3718300	+		17893	11510	8575	8613	20846	20846					0.008300967085460798
LHNIESPML	9	Unmodified	_LHNIESPML_					0	0	0			REV__ENSG00000189357|ENST00000419782|SPATA31D4	REV__ENSG00000189357|ENST00000419782|SPATA31D4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	527.273509	1052.53247	1.9442	0.0010251	1.3073	0.0006893	3.2515	0.0017144	527.2739865565861	42.585	0.30492	42.905	42.758	43.063	0.32058	-0.10678	0.00066121	NaN	32.305	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	817810	+		17894	11510	8575	8613							0.008300967085460798
LHPCHGAADMV	11	Unmodified	_LHPCHGAADMV_					0	0	0			REV__tr|A0A553SIP6|A0A553SIP6_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_15250PE=3SV=1	REV__tr|A0A553SIP6|A0A553SIP6_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_15250PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	575.8442870974541	2	575.760243	1149.50593	2.7688	0.0015941	3.1538	0.0018158	5.9225	0.00341	575.7629968168867	75.023	0.27863	76.805	76.699	76.978	1.7817					13	8	2	0	0	0	0.14414	1	31475	31475		18.146	1.2041	1	530330	+		17895	14860	8576	8614	20847	20847					-0.06283915454446287
LHPELEQYRL	10	Unmodified	_LHPELEQYRL_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	432.9031555056572	3	433.234822	1296.68264	1.2034	0.00052136	-1.0932	-0.00047363	0.11018	4.7733E-05	433.2343726678343	42.214	5.2324	42.214	41.821	47.053	0					309	167	2	0	0	0	0.12528	1	18268	18268		7.1017	2.9122	1	56976000			17896	4956	8577	8615	20848	20848					0.0461615997185163
LHPLAGARAG	10	Unmodified	_LHPLAGARAG_					0	0	0		ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENST00000441747.6_1_19:1482426-1490130:-|nuORF;ENST00000591201.5_1_19:1483001-1487304:-|nuORF;ENST00000300954.9_1_19:1483001-1487678:-|nuORF;ENST00000586616.5_1_19:1482426-1487301:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7778503298759	2	481.780151	961.545748	2.5011	0.001205	-1.8102	-0.00087212	0.69088	0.00033285	481.7791378173942	59.332	0.42888	61.301	61.037	61.466	1.969					31	13	3	0	0	0	0.70643	1	24950	24950		18.135	1.1927	1	17464000			17897	7463	8578	8616	20849	20849					0.06343715602804423
LHPLLEIVI	9	Unmodified	_LHPLLEIVI_					0	0	0		NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8345825076103	2	523.83406	1045.65357	1.8924	0.00099129	1.5226	0.00079758	3.415	0.0017889	523.8345665653735	76.907	0.35167	78.674	78.514	78.865	1.7672					20	10	3	0	0	0	0.28226	1	32273	32273		26.341	5.4701	1	688130			17898	7807	8579	8617	20850	20850					0.1325666741349778
LHPLLEIVI	9	Unmodified	_LHPLLEIVI_					0	0	0		NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	523.83406	1045.65357	1.9173	0.0010043	0.5163	0.00027046	2.4336	0.0012748	523.834005589926	78.453	0.28436	78.762	78.641	78.925	0.30933	0.049675	-0.00041753	NaN	26.341	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	314070			17899	7807	8579	8617							0.1325666741349778
LHPLLEIVI	9	Unmodified	_LHPLLEIVI_					0	0	0		NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	NAF1|p.P476Hfs*21|1|0.25|ENSG00000145414|chr4:163128957-163128957|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	523.83406	1045.65357	2.5845	0.0013538	0.12628	6.6151E-05	2.7108	0.00142	523.834096633327	77.42	0.34904	78.701	78.507	78.856	1.2809	-0.011225	-0.00082614	NaN	26.341	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655800			17900	7807	8579	8617							0.1325666741349778
LHPPVPSP	8	Unmodified	_LHPPVPSP_					0	0	0		ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2376891970634	2	422.239796	842.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.01	1	97.115	96.615	97.615	0.105								0	0	0	1.0178	1	40593	40593		2.8892	0	1				17901	5098	8580	8618	20851	20851					0.03750434559901805
LHPRPRRG	8	Unmodified	_LHPRPRRG_					0	0	0			REV__ENST00000302804.11_1_19:57742482-57742617:+|nuORF	REV__ENST00000302804.11_1_19:57742482-57742617:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8009826540947	2	494.799209	987.583865	5.8965	0.0029176	-2.1986	-0.0010879	3.6978	0.0018297	494.7982234952372	88.601	0.45219	89.657	89.466	89.918	1.0562					31	13	3	0	0	0	0.89008	1	37377	37377		2.5775	0.92486	1	2036600	+		17902	12322	8581	8619	20852	20852					0.08957646308135736
LHQLLLSGL	9	Unmodified	_LHQLLLSGL_					0	0	0			REV__nc|ENSG00000196943|Q86U38-2|NOP9	REV__nc|ENSG00000196943|Q86U38-2|NOP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.3123657107353	2	497.30821	992.601866	2.9906	0.0014873	3.1504	0.0015667	6.141	0.003054	497.309867465038	75.888	1.1427	76.21	75.519	76.662	0.32163					94	36	4	0	0	0	0.10993	1	31668	31668		46.021	6.0636	1	6966500	+		17903	11653	8582	8620	20853	20853					0.10526923719623937
LHQQVLKGR	9	Unmodified	_LHQQVLKGR_					0	0	0		ENST00000506104.1_1_17:47013530-47014253:-|nuORF;ENST00000511214.1_1_17:47013530-47014505:-|nuORF;ENST00000509989.5_1_17:47007839-47014253:-|nuORF;SNF8|p.E205Rfs*13|1|0.04|ENSG00000159210|chr17:48931669-48931669|C/-|frameshift_variant;nc|ENSG00000159210|Q96H20-2|SNF8;ENSG00000159210|ENST00000502492|SNF8	ENST00000506104.1_1_17:47013530-47014253:-|nuORF	ENST00000506104.1_1_17:47013530-47014253:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2224304080009	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.796	1	19.989	19.489	20.489	0.19342								0	0	0	0.42693	1	8225	8225		1.0715	0	1				17904	3519	8583	8621	20854	20854					0.10499649073994988
LHQRLNSRQ	9	Unmodified	_LHQRLNSRQ_					0	0	0			REV__ENSG00000180884|ENST00000404801|ZNF792	REV__ENSG00000180884|ENST00000404801|ZNF792	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3240234255791	2	576.323245	1150.63194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.883	1	44.883	44.383	45.383	0								0	0	0	0.42693	1	18783	18783		2.3027	0	1		+		17905	11305	8584	8622	20855	20855					0.06264675437523692
LHRDKRVILRR	11	Unmodified	_LHRDKRVILRR_					0	0	0			REV__nc|ENSG00000066279|Q8IZT6-2|ASPM	REV__nc|ENSG00000066279|Q8IZT6-2|ASPM	MSMS	GG20161007_CRH_Patient100_A02_01	1	731.4650146365166	2	731.465493	1460.91643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.682	1	97.682	97.182	98.182	0								0	0	0	0.63775	1	40840	40840		0.35063	0	1		+		17906	8682	8585	8623	20856	20856					0.2044110092185747
LHRETGKKIG	10	Unmodified	_LHRETGKKIG_					0	0	0		RBBP6|p.N1212H|1|0.09|ENSG00000122257|chr16:24570324-24570324|A/C|missense_variant	RBBP6|p.N1212H|1|0.09|ENSG00000122257|chr16:24570324-24570324|A/C|missense_variant	RBBP6|p.N1212H|1|0.09|ENSG00000122257|chr16:24570324-24570324|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2295715212822	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.053	1	89.109	88.609	89.609	1.0562								0	0	0	0.66218	1	37131	37131		0.77653	0	1				17907	8068	8586	8624	20857	20857					0.09851614382841944
LHRHGIIH	8	Unmodified	_LHRHGIIH_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000120539|Q96GX5-2|MASTL;MASTL|p.W323Cfs*9|1|0.07|ENSG00000120539|chr10:27167258-27167259|-/C|frameshift_variant	ENSG00000120539|ENST00000375940|MASTL	ENSG00000120539|ENST00000375940|MASTL	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1950561404228	3	328.194632	981.562067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.638	1	27.909	27.409	28.409	0.27119								0	0	0	1.0178	1	11556	11556		1.8442	0	1				17908	2108	8587	8625	20858	20858					0.07054841559568104
LHRKEKRLEKR	11	Unmodified	_LHRKEKRLEKR_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.3111144900322	3	498.310947	1491.91101	3.2244	0.0016068	-1.6307	-0.00081259	1.5937	0.00079418	498.30969825803487	88.797	1.0188	89.021	88.436	89.454	0.22359					69	31	3	0	0	0	1.0402	1	37339	37339		0.094841	0.021578	1	1835800	+		17909	10317	8588	8626	20859	20859					0.18473377339387298
LHRKEKRLEKR	11	Unmodified	_LHRKEKRLEKR_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.6468688845634	3	498.310947	1491.91101	5.4291	0.0027054	-3.3092	-0.001649	2.1199	0.0010564	498.30880767757697	88.121	0.54515	89.177	89.049	89.594	1.0562					29	16	2	0	0	0	1.0388	1	37160	37160		0.50596	0.41111	1	1087600	+		17910	10317	8588	8626	20860	20860					0.18473377339387298
LHRKEKRLEKR	11	Unmodified	_LHRKEKRLEKR_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	498.6468688845634	3	498.310947	1491.91101	5.4291	0.0027054	-3.3092	-0.001649	2.1199	0.0010564	498.30880767757697	88.121	0.54515	89.177	89.049	89.594	1.0562					29	16	2	0	0	0	0.14606	1	37160	37160		0.50596	0.41111	1	1087600	+		17911	10317	8588	8626	20861	20861					0.18473377339387298
LHRKEKRLEKR	11	Unmodified	_LHRKEKRLEKR_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	374.1001464724541	4	373.98503	1491.91101	0.4699	0.00017574	-0.48625	-0.00018185	-0.016354	-6.116E-06	374.2354198293689	28.907	0.30245	30.706	30.627	30.929	1.7987					21	9	3	0	0	0	0.14606	1	12094	12094		0	0	1	729370	+		17912	10317	8588	8626	20862	20862					0.18473377339387298
LHRKEKRLEKR	11	Unmodified	_LHRKEKRLEKR_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	498.310947	1491.91101	4.5481	0.0022664	-1.7676	-0.00088083	2.7805	0.0013856	498.3099887030096	87.998	0.6377	89.444	89.093	89.731	1.4467	0.29576	0.00023666	NaN	0.50596	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1069800	+		17913	10317	8588	8626							0.18473377339387298
LHRKKHLG	8	Unmodified	_LHRKKHLG_					0	0	0		tr|A0A553SF24|A0A553SF24_NIACIDiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_08085PE=4SV=1	tr|A0A553SF24|A0A553SF24_NIACIDiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_08085PE=4SV=1	tr|A0A553SF24|A0A553SF24_NIACIDiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_08085PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	330.2119323611259	3	330.210282	987.609017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.717	1	19.911	19.411	20.411	0.19342								0	0	0	1.0178	1	8192	8192		0.45834	0	1				17914	16036	8589	8627	20863	20863					0.11471701110713184
LHRLKAIMK	9	Unmodified	_LHRLKAIMK_					0	0	0			REV__tr|A0A7D6ZF88|A0A7D6ZF88_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13995PE=4SV=1	REV__tr|A0A7D6ZF88|A0A7D6ZF88_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13995PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.3536254763603	2	555.352428	1108.6903	2.1451	0.0011913	0.52654	0.00029242	2.6716	0.0014837	555.3527255020417	86.261	0.57384	86.261	85.945	86.519	0					62	18	4	0	0	0	0.84963	1	35960	35960		0.6015	0	1	137760000	+		17915	15629	8590	8628	20864	20864					0.14030640758437585
LHRLKAIMK	9	Unmodified	_LHRLKAIMK_					0	0	0			REV__tr|A0A7D6ZF88|A0A7D6ZF88_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13995PE=4SV=1	REV__tr|A0A7D6ZF88|A0A7D6ZF88_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13995PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3540527224541	2	555.352428	1108.6903	2.5242	0.0014018	0.070223	3.8998E-05	2.5944	0.0014408	555.3524635252306	86.078	0.55022	86.33	86.006	86.556	0.25227					59	17	4	0	0	0	0.84963	1	35956	35956		0.6015	0	1	103930000	+		17916	15629	8590	8628	20865	20865					0.14030640758437585
LHRLLVPV	8	Unmodified	_LHRLLVPV_					0	0	0			REV__ENST00000361757.7_1_19:1109529-1111037:-|nuORF	REV__ENST00000361757.7_1_19:1109529-1111037:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.2115051150322	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.07	1	105.07	104.57	105.57	0								0	0	0	1.0178	1	44511	44511		0.45834	0	1		+		17917	12605	8591	8629	20866	20866					0.13738951164714308
LHRLPCHL	8	Unmodified	_LHRLPCHL_					0	0	0		nc|ENSG00000186474|Q9UKR0-3|KLK12	nc|ENSG00000186474|Q9UKR0-3|KLK12	nc|ENSG00000186474|Q9UKR0-3|KLK12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7798339724541	2	494.779096	987.54364	2.7588	0.001365	-0.78525	-0.00038852	1.9736	0.00097649	494.77904099383574	81.734	0.64712	82.015	81.812	82.459	0.2802					50	20	4	0	0	0	0.88958	1	34130	34130		2.8892	0	1	15408000			17918	7950	8592	8630	20867	20867					0.0493696359334308
LHRLRLRE	8	Unmodified	_LHRLRLRE_					0	0	0		ENST00000471767.1_1_5:176893910-176894598:-|nuORF;ENST00000472831.5_1_5:176884436-176895158:-|nuORF;nc|ENSG00000113758|Q16643|DBN1;nc|ENSG00000113758|Q16643-2|DBN1;ENSG00000113758|ENST00000393565|DBN1	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8411132693291	2	546.841074	1091.66759	2.3194	0.0012683	-2.1191	-0.0011588	0.20033	0.00010955	546.8396822390376	85.322	0.48198	86.481	86.179	86.661	1.159					64	17	5	0	0	0	0.89176	1	35775	35775		0.79363	0	1	94633000			17919	1840	8593	8631	20868	20868					0.12542757685173456
LHRLRLRE	8	Unmodified	_LHRLRLRE_					0	0	0		ENST00000471767.1_1_5:176893910-176894598:-|nuORF;ENST00000472831.5_1_5:176884436-176895158:-|nuORF;nc|ENSG00000113758|Q16643|DBN1;nc|ENSG00000113758|Q16643-2|DBN1;ENSG00000113758|ENST00000393565|DBN1	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8402587771416	2	546.841074	1091.66759	2.8571	0.0015624	-3.408	-0.0018636	-0.55093	-0.00030127	546.838977205463	85	0.57192	86.596	86.25	86.822	1.5962					64	21	4	0	0	0	0.89176	1	35712	35712		0.79363	0	1	85050000			17920	1840	8593	8631	20869	20869					0.12542757685173456
LHRPRITR	8	Unmodified	_LHRPRITR_					0	0	0		ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8290283083916	2	524.827966	1047.64138	2.7901	0.0014643	-0.85865	-0.00045064	1.9315	0.0010137	524.8275843120056	82.998	0.68253	84.211	83.889	84.572	1.2125					76	21	5	0	0	0	0.89176	1	34892	34892		0.79363	0	1	80288000			17921	2956	8594	8632	20870	20870					0.11946488513672193
LHRPRITR	8	Unmodified	_LHRPRITR_					0	0	0		ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	ENSG00000141384|ENST00000269142|TAF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.8286010622978	2	524.827966	1047.64138	2.7608	0.001449	-1.1875	-0.00062326	1.5733	0.0008257	524.8273818981037	82.672	0.61899	84.342	84.049	84.668	1.67					74	19	5	0	0	0	0.89176	1	34695	34695		0.79363	0	1	113350000			17922	2956	8594	8632	20871	20871					0.11946488513672193
LHRQKKKQE	9	Unmodified	_LHRQKKKQE_					0	0	0			REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF	REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8576537966728	2	597.856921	1193.69929	2.5454	0.0015218	-1.1756	-0.00070286	1.3698	0.00081894	597.8560053830457	91.722	0.38878	91.912	91.723	92.112	0.19042					33	11	4	0	0	0	0.82604	1	38428	38428		2.3027	0	1	2017400	+		17923	9706	8595	8633	20872	20872					0.11018705648439209
LHRQKKKQE	9	Unmodified	_LHRQKKKQE_					0	0	0			REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF	REV__ENST00000525980.5_1_9:134025776-134070755:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	597.856921	1193.69929	4.187	0.0025032	-0.66163	-0.00039556	3.5253	0.0021076	597.8562392073294	91.06	0.31737	92.042	91.878	92.196	0.98157	0.070806	0.00023515	NaN	2.3027	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	902820	+		17924	9706	8595	8633							0.11018705648439209
LHRRKWFRWF	10	Unmodified	_LHRRKWFRWF_					0	0	0			REV__tr|A0A553SPW4|A0A553SPW4_NIACIPBP1Afamilypenicillin-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11825PE=4SV=1	REV__tr|A0A553SPW4|A0A553SPW4_NIACIPBP1Afamilypenicillin-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11825PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.6250182986259	3	511.289707	1530.84729	1.9142	0.00097872	-0.64541	-0.00032999	1.2688	0.00064873	511.2894937890966	45.831	0.58231	46.16	45.926	46.508	0.32899					43	18	4	0	0	0	0.89803	1	19203	19203		0.77653	0.27058	1	3303800	+		17925	15109	8596	8634	20873	20873					0.10310061692939598
LHRRRLRR	8	Unmodified	_LHRRRLRR_					0	0	0			REV__ENST00000554003.1_1_12:57638697-57638930:-|nuORF	REV__ENST00000554003.1_1_12:57638697-57638930:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2533752322197	3	388.254996	1161.74316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.55	1	28.297	27.797	28.797	1.747								0	0	0	1.0178	1	11107	11107		0.45834	0	1		+		17926	13848	8597	8635	20874	20874					0.16875779656129453
LHRVCPRL	8	Unmodified	_LHRVCPRL_					0	0	0		ENST00000595594.1_1_19:17889305-17893945:+|nuORF	ENST00000595594.1_1_19:17889305-17893945:+|nuORF	ENST00000595594.1_1_19:17889305-17893945:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	992.7458373904228	1	993.577465	992.570189	1.214	0.0012062	-0.35683	-0.00035454	0.85719	0.00085168	993.5771734058009	107.69	0.14711	107.69	107.62	107.77	0					18	7	3	0	0	0	2.3239	1	46242	46242		0.79363	0	1	49591000			17927	7516	8598	8636	20875	20875					0.07360652484669572
LHRVPPALA	9	Unmodified	_LHRVPPALA_					0	0	0			REV__nc|ENSG00000123146|P48960-2|ADGRE5	REV__nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.3001891970634	2	487.300719	972.586885	1.622	0.00079041	-2.5806	-0.0012575	-0.95855	-0.0004671	487.29930957523123	71.62	0.223	71.62	71.477	71.7	0					10	6	2	0	0	0	0.82604	1	29833	29833		2.3027	0.24298	1	765820	+		17928	9618	8599	8637	20876	20876					0.09949476642270838
LHRVPPALA	9	Unmodified	_LHRVPPALA_					0	0	0			REV__nc|ENSG00000123146|P48960-2|ADGRE5	REV__nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	487.300719	972.586885	1.622	0.00079041	-2.5806	-0.0012575	-0.95855	-0.0004671	487.29930957523123	71.62	0.223	71.62	71.477	71.7	0	-0.084536	0.0014741	NaN	2.3027	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	765820	+		17929	9618	8599	8637							0.09949476642270838
LHRVPPALA	9	Unmodified	_LHRVPPALA_					0	0	0			REV__nc|ENSG00000123146|P48960-2|ADGRE5	REV__nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	487.300719	972.586885	2.3273	0.0011341	-3.9181	-0.0019093	-1.5908	-0.00077522	487.29908114806864	71.38	0.3213	71.704	71.462	71.784	0.32359	-0.00099424	0.00017051	NaN	2.3027	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708210	+		17930	9618	8599	8637							0.09949476642270838
LHRVPPALA	9	Unmodified	_LHRVPPALA_					0	0	0			REV__nc|ENSG00000123146|P48960-2|ADGRE5	REV__nc|ENSG00000123146|P48960-2|ADGRE5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	487.300719	972.586885	3.0397	0.0014812	-5.1063	-0.0024883	-2.0666	-0.0010071	487.29820899251456	70.437	0.22559	71.79	71.648	71.873	1.3536	0.08553	-0.00098752	NaN	2.3027	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	420550	+		17931	9618	8599	8637							0.09949476642270838
LHRYGDFK	8	Unmodified	_LHRYGDFK_					0	0	0		ENSG00000164187|ENST00000296603|LMBRD2;LMBRD2|p.P127Ffs*34|1|0.05|ENSG00000164187|chr5:36137431-36137432|-/ATAATACTATTTACAGACTCACTCCTACATTTAAA|frameshift_variant	ENSG00000164187|ENST00000296603|LMBRD2	ENSG00000164187|ENST00000296603|LMBRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.1847411990166	3	345.850531	1034.52976	-0.32398	-0.00011205	1.1238	0.00038868	0.79986	0.00027663	346.18540806465165	13.322	0.81189	14.15	13.799	14.61	0.82789					45	29	2	0	0	0	0.87803	1	5544	5544		7.2892	0	1	909570			17932	3757	8600	8638	20877	20877					0.013880093659054182
LHSGAGGG	8	Unmodified	_LHSGAGGG_					0	0	0			REV__ENSG00000135638|ENST00000258106|EMX1	REV__ENSG00000135638|ENST00000258106|EMX1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1614868044853	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.404	1	24.404	23.904	24.904	0								0	0	0	1.0178	1	10178	10178		0	0	1		+		17933	9949	8601	8639	20878	20878					-0.03244430610550353
LHSGGGGG	8	Unmodified	_LHSGGGGG_					0	0	0		nc|ENSG00000064651|P55011-3|SLC12A2;ENSG00000064651|ENST00000262461|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	nc|ENSG00000064651|P55011-3|SLC12A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	321.1550475955009	2	321.15372	640.292888	1.9203	0.0006167	2.4875	0.00079886	4.4077	0.0014156	321.1545426479482	87.07	0.55658	87.314	87.124	87.681	0.24387					39	20	2	0	0	0	0.89198	2	36402	36402;36482		0	0	1	74813000			17934	776	8602	8640	20879;20880	20879					-0.04164717127594031
LHSIALIW	8	Unmodified	_LHSIALIW_					0	0	0		ENST00000464577.1_1_1:22028060-22030944:-|nuORF	ENST00000464577.1_1_1:22028060-22030944:-|nuORF	ENST00000464577.1_1_1:22028060-22030944:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1921264529228	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.711	1	88.711	88.211	89.211	0								0	0	0	1.0178	1	37087	37087		0.45834	0	1				17935	6694	8603	8641	20881	20881					0.07647269519429756
LHSLVKHGQ	9	Unmodified	_LHSLVKHGQ_					0	0	0		nc|ENSG00000082146|Q9C0K7-3|STRADB;ENSG00000082146|ENST00000194530|STRADB;ENST00000468123.1_1_2:202340421-202342983:+|nuORF;ENST00000478954.1_1_7:150210046-150210850:-|nuORF;nc|ENSG00000082146|Q9C0K7-2|STRADB	nc|ENSG00000082146|Q9C0K7-3|STRADB	nc|ENSG00000082146|Q9C0K7-3|STRADB	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1967346072197	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.94	1	37.94	37.44	38.44	0								0	0	0	0.42693	1	15903	15903		1.0715	0.61312	1				17936	1027	8604	8642	20882	20882					0.06387984774278266
LHSRLKRR	8	Unmodified	_LHSRLKRR_					0	0	0		ENST00000372692.8_1_9:131446118-131453502:+|nuORF	ENST00000372692.8_1_9:131446118-131453502:+|nuORF	ENST00000372692.8_1_9:131446118-131453502:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3412963747978	2	533.341241	1064.66793	2.9772	0.0015879	-2.3494	-0.001253	0.6278	0.00033483	533.3400474285888	82.672	0.6506	84.342	84.017	84.668	1.67					65	20	5	0	0	0	0.89176	1	34696	34696		0.79363	0	1	86791000			17937	6142	8605	8643	20883	20883					0.1381817740502811
LHSTGQYQ	8	Unmodified	_LHSTGQYQ_					0	0	0		nc|ENSG00000111581|P57740-3|NUP107;nc|ENSG00000111581|P57740-2|NUP107;ENSG00000111581|ENST00000229179|NUP107	nc|ENSG00000111581|P57740-3|NUP107	nc|ENSG00000111581|P57740-3|NUP107	MSMS	GG20161007_CRH_Patient100_A02_02	2	467.2287780642509	2	467.224874	932.435195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.2	1	108.25	107.75	108.75	0.050644								0	0	0	1.0178	1	46468	46468		5.7604	0	1				17938	1742	8606	8644	20884	20884					-0.03372549176094708
LHSVILGV	8	Unmodified	_LHSVILGV_					0	0	0			REV__ENSG00000136718|ENST00000259239|IMP4	REV__ENSG00000136718|ENST00000259239|IMP4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3158752322197	2	419.263271	836.511988	0.2395	0.00010041	4.4631	0.0018712	4.7026	0.0019716	419.2662811965502	107.78	0.19261	107.78	107.67	107.86	0					20	10	2	0	0	0	2.3239	1	46206	46206		0	0	1	17087000	+		17939	9991	8607	8645	20885	20885					0.08719294111062936
LHSVILGV	8	Unmodified	_LHSVILGV_					0	0	0			REV__ENSG00000136718|ENST00000259239|IMP4	REV__ENSG00000136718|ENST00000259239|IMP4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3158141970634	2	419.263271	836.511988	3.0172	0.001265	2.7121	0.0011371	5.7292	0.0024021	419.2655383186788	107.76	0.23402	107.81	107.68	107.91	0.052452					19	12	2	0	0	0	2.3239	1	46128	46128		0	0	1	13514000	+		17940	9991	8607	8645	20886	20886					0.08719294111062936
LHSVILGV	8	Unmodified	_LHSVILGV_					0	0	0			REV__ENSG00000136718|ENST00000259239|IMP4	REV__ENSG00000136718|ENST00000259239|IMP4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	419.263271	836.511988	3.0422	0.0012755	1.3585	0.00056957	4.4007	0.0018451	419.26472074923544	107.71	0.20123	107.87	107.79	107.99	0.15781	0.044067	-0.00020991	NaN	0	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35080000	+		17941	9991	8607	8645							0.08719294111062936
LHSVILGV	8	Unmodified	_LHSVILGV_					0	0	0			REV__ENSG00000136718|ENST00000259239|IMP4	REV__ENSG00000136718|ENST00000259239|IMP4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	419.263271	836.511988	3.2182	0.0013493	-0.31097	-0.00013038	2.9072	0.0012189	419.2633703931175	107.69	0.22055	107.85	107.74	107.96	0.15795	0.019128	-0.0016098	NaN	0	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20053000	+		17942	9991	8607	8645							0.08719294111062936
LHSVRSRLPSL	11	Unmodified	_LHSVRSRLPSL_					0	0	0			REV__ENST00000488250.5_1_12:48131352-48135452:-|nuORF	REV__ENST00000488250.5_1_12:48131352-48135452:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2573119997978	3	422.254328	1263.74115	4.1133	0.0017368	0.71798	0.00030317	4.8312	0.00204	422.25527975731774	90.758	0.89904	91.739	91.14	92.039	0.98156					58	27	3	0	0	0	1.0365	1	38255	38255		1.2148	0	1	1100600	+		17943	8798	8608	8646	20887	20887					0.11983261337013573
LHTEKKAR	8	Unmodified	_LHTEKKAR_					0	0	0			REV__CRYBG3|p.I2969Ffs*49|1|0.05|ENSG00000080200|chr3:97943305-97943306|-/TTTTTAAGTAAACACAAAGGTTATC|frameshift_variant	REV__CRYBG3|p.I2969Ffs*49|1|0.05|ENSG00000080200|chr3:97943305-97943306|-/TTTTTAAGTAAACACAAAGGTTATC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1966430544853	3	328.197931	981.571963	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.727	1	27.727	27.227	28.227	0								0	0	0	1.0178	1	11598	11598		0.45834	0	1		+		17944	8410	8609	8647	20888	20888					0.08043984774269575
LHTLKIILL	9	Unmodified	_LHTLKIILL_					0	0	0		tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	355.2460510134697	3	355.24611	1062.7165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.76	1	103.76	103.26	104.26	0								0	0	0	0.42693	1	43640	43640		0	0	1				17945	16338	8610	8648	20889	20889					0.1876523320158867
LHTSVPFLSDR	11	Unmodified	_LHTSVPFLSDR_					0	0	0		ENST00000530769.5_1_11:93466507-93466609:-|nuORF;ENST00000527169.5_1_11:93466273-93470263:-|nuORF	ENST00000530769.5_1_11:93466507-93466609:-|nuORF	ENST00000530769.5_1_11:93466507-93466609:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	636.3440429568291	2	636.340769	1270.66699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.586	1	53.586	53.086	54.086	0								0	0	0	0.63775	1	22344	22344		2.2828	0.63015	1				17946	7130	8611	8649	20890	20890					0.04247873454778528
LHTSVYQCQRW	11	Unmodified	_LHTSVYQCQRW_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	474.2319213747978	3	474.231194	1419.67175	2.4967	0.001184	-1.1305	-0.0005361	1.3663	0.00064794	474.23079343158787	47.037	2.7853	47.037	46.66	49.446	0					214	88	6	0	0	0	0.89163	2	19608	19608;19723		10.315	1.0715	1	76225000	+		17947	11477	8612	8650	20891;20892	20891					-0.021295656740903723
LHVCTYLG	8	Unmodified	_LHVCTYLG_					0	0	0		ENST00000253506.9_1_18:77288339-77288585:+|nuORF	ENST00000253506.9_1_18:77288339-77288585:+|nuORF	ENST00000253506.9_1_18:77288339-77288585:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	453.2314330935478	2	453.231113	904.447674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.256	1	29.535	29.035	30.035	0.2793								0	0	0	1.0178	1	12247	12247		5.7604	0	1				17948	5592	8613	8651	20893	20893					-0.008372290374040858
LHVFHGLL	8	Unmodified	_LHVFHGLL_					0	0	0		ENSG00000169174|ENST00000302118|PCSK9	ENSG00000169174|ENST00000302118|PCSK9	ENSG00000169174|ENST00000302118|PCSK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2790405154228	2	468.276712	934.538872	3.5767	0.0016749	1.3029	0.00061011	4.8796	0.002285	468.27727111863624	103.41	0.086021	103.59	103.53	103.62	0.18066					6	3	2	0	0	0	0.89198	1	43540	43540		0	0	1	277110000			17949	4072	8614	8652	20894	20894					0.06898402722242736
LHVGKRRR	8	Unmodified	_LHVGKRRR_					0	0	0		ENST00000554273.1_1_14:50998776-50999365:-|nuORF	ENST00000554273.1_1_14:50998776-50999365:-|nuORF	ENST00000554273.1_1_14:50998776-50999365:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3295471072197	2	511.328134	1020.64171	1.4928	0.00076333	-3.14	-0.0016056	-1.6472	-0.00084224	511.32701290936313	80.232	0.60221	81.948	81.568	82.17	1.7167					70	19	6	0	0	0	0.89176	1	33547	33547		0.79363	0	1	81153000			17950	7287	8615	8653	20895	20895					0.13221908233549584
LHVKLSDL	8	Unmodified	_LHVKLSDL_					0	0	0		tr|A0A7D6W0K2|A0A7D6W0K2_9CLOTdUTPdiphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_23720PE=4SV=1	tr|A0A7D6W0K2|A0A7D6W0K2_9CLOTdUTPdiphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_23720PE=4SV=1	tr|A0A7D6W0K2|A0A7D6W0K2_9CLOTdUTPdiphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_23720PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1444274783134	2	462.779285	923.544017	2.852	0.0013199	-1.3475	-0.00062361	1.5045	0.00069626	462.7786776527815	47.572	0.30695	49.548	49.374	49.681	1.976					14	9	2	0	0	0	2.3239	1	19924	19924		2.8892	0	1	802730			17951	17012	8616	8654	20896	20896					0.0791866179419003
LHVRRLPVHRL	11	Unmodified	_LHVRRLPVHRL_					0	0	0			REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.9658691287041	3	465.965112	1394.87351	3.5554	0.0016567	-2.35	-0.001095	1.2054	0.00056167	465.964001035612	105.8	0.36517	105.96	105.65	106.01	0.16679					38	18	5	0	0	0	1.0402	1	45081	45081		0.094841	0.011491	1	74225000	+		17952	8807	8617	8655	20897	20897					0.19186330864476986
LHVSYHVTVP	10	Unmodified	_LHVSYHVTVP_					0	0	0		ENST00000342115.8_1_1:110173783-110174137:+|nuORF	ENST00000342115.8_1_1:110173783-110174137:+|nuORF	ENST00000342115.8_1_1:110173783-110174137:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	576.0286132693291	2	576.314023	1150.61349	1.1373	0.00065543	2.124	0.0012241	3.2613	0.0018795	576.3148392449792	99.159	0.11919	99.159	99.079	99.198	0					7	3	3	0	0	0	0.12542	1	41474	41474		3.9444	0.3479	1	11351000			17953	5938	8618	8656	20898	20898					0.04421120742927087
LHWWLWWLWIV	11	Unmodified	_LHWWLWWLWIV_					0	0	0		ENST00000361229.8_1_X:101976007-102003782:+|nuORF;ENST00000448867.1_1_X:102001081-102003782:+|nuORF	ENST00000361229.8_1_X:101976007-102003782:+|nuORF	ENST00000361229.8_1_X:101976007-102003782:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	819.4432861208916	2	819.442632	1636.87071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.763	1	98.964	98.464	99.464	0.20124								0	0	0	0.63775	1	41582	41582		0.35063	0.043601	1				17954	6034	8619	8657	20899	20899					0.0777506268691468
LHWYKILLGI	10	Unmodified	_LHWYKILLGI_					0	0	0		nc|ENSG00000150045|Q9NZS2-3|KLRF1;nc|ENSG00000150045|Q9NZS2-4|KLRF1;nc|ENSG00000150045|Q9NZS2-2|KLRF1;ENSG00000150045|ENST00000617889|KLRF1	nc|ENSG00000150045|Q9NZS2-3|KLRF1	nc|ENSG00000150045|Q9NZS2-3|KLRF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3858520388603	2	628.381709	1254.74886	2.2248	0.001398	1.7777	0.0011171	4.0025	0.0025151	628.3833454129444	75.799	1.1962	77.567	76.963	78.159	1.7672					65	38	3	0	0	0	0.89646	1	31820	31820		1.8442	0.51471	1	2262400			17955	3260	8620	8658	20900	20900					0.1316802060455302
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.6462280154228	3	483.645267	1447.91397	1.6213	0.00078411	1.729	0.00083625	3.3503	0.0016204	483.6459641566539	35.87	0.34259	35.87	35.578	35.92	0					29	23	3	0	0	0	1.0365	3	14976	14927;14976;15029		1.2148	0.76031	1	16185000	+		17956	10368	8621	8659	20901;20902;20903	20902					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.6470214724541	3	483.645267	1447.91397	1.6289	0.00078779	0.92777	0.00044871	2.5566	0.0012365	483.64567167735856	36.021	0.21303	36.021	35.908	36.121	0					41	19	3	0	0	0	1.0365	1	15073	15073		1.2148	0.588	1	20315000	+		17957	10368	8621	8659	20904	20904					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.6474792361259	3	483.645267	1447.91397	2.0424	0.00098782	2.0976	0.0010145	4.1401	0.0020023	483.64622361506014	32.585	1.105	32.879	32.528	33.633	0.29431					143	37	5	0	0	0	1.0365	7	13617	13617;13666;13708;13809;13859;13911;13956		1.2148	0.76031	1	27045000	+		17958	10368	8621	8659	20905;20906;20907;20908;20909;20910;20911	20905					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9878723025322	4	362.98577	1447.91397	1.0375	0.00037658	2.7243	0.00098887	3.7617	0.0013655	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.0391	1	13845	13845		0.40827	0.26837	1	559590000	+		17959	10368	8621	8659	20912	20912					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.9808227419853	3	483.645267	1447.91397	2.1534	0.0010415	1.1775	0.00056949	3.3309	0.001611	483.6455909152659	34.773	0.46894	35.072	34.703	35.172	0.29941					53	21	3	0	0	0	1.039	4	14615	14484;14527;14576;14615		0.45452	0.31463	1	9615400	+		17960	10368	8621	8659	20913;20914;20915;20916	20916					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9864990115166	4	362.98577	1447.91397	1.1597	0.00042097	0.46377	0.00016834	1.6235	0.00058931	362.9860576598574	34.963	1.2235	35.263	34.602	35.825	0.29942					301	82	4	0	0	0	1.0369	3	14635	14505;14635;14673		1.1098	1.0149	1	314680000	+		17961	10368	8621	8659	20917;20918;20919	20918					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9875060915947	4	362.98577	1447.91397	-0.4714	-0.00017111	3.6451	0.0013231	3.1737	0.001152	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.0391	1	13131	13131		0.40827	0.26837	1	563060000	+		17962	10368	8621	8659	20920	20920					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6472045779228	3	483.645267	1447.91397	0.74599	0.0003608	2.7917	0.0013502	3.5377	0.001711	483.64649418664004	31.202	0.40589	33.027	32.896	33.302	1.8246					36	13	4	0	0	0	1.039	1	13143	13143		0.45452	0.31463	1	14180000	+		17963	10368	8621	8659	20921	20921					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9861022830009	4	362.98577	1447.91397	0.45921	0.00016669	0.63003	0.00022869	1.0892	0.00039538	362.9860279302442	33.018	1.1002	34.843	34.092	35.193	1.8246					257	70	5	0	0	0	1.0369	2	13832	13832;13948		1.1098	0.70149	1	942270000	+		17964	10368	8621	8659	20922;20923	20922					0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	483.645267	1447.91397	1.6213	0.00078411	1.729	0.00083625	3.3503	0.0016204	483.6459641566539	35.87	0.34259	35.87	35.578	35.92	0	0	0	NaN	1.2148	29	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16185000	+		17965	10368	8621	8659							0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	483.645267	1447.91397	2.1534	0.0010415	1.1775	0.00056949	3.3309	0.001611	483.6455909152659	34.773	0.46894	35.072	34.703	35.172	0.29941	0	0	NaN	0.45452	53	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9615400	+		17966	10368	8621	8659							0.20793252464181933
LHYIKLIRHKK	11	Unmodified	_LHYIKLIRHKK_					0	0	0			REV__ENSG00000149311|ENST00000675843|ATM	REV__ENSG00000149311|ENST00000675843|ATM	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	362.98577	1447.91397	0.44792	0.00016259	-0.83874	-0.00030445	-0.39083	-0.00014186	362.98565922556577	33.555	0.049549	35.378	35.35	35.399	1.8227	0.057575	-0.0018447	NaN	1.1098	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5716600	+		17967	10368	8621	8659							0.20793252464181933
LHYPYLMLHDR	11	Unmodified	_LHYPYLMLHDR_					0	0	0			REV__FAM91A1|p.S111Kfs*3|1|0.21|ENSG00000176853|chr8:123777282-123777283|-/A|frameshift_variant	REV__FAM91A1|p.S111Kfs*3|1|0.21|ENSG00000176853|chr8:123777282-123777283|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.5863830447197	3	486.583456	1456.72854	1.4406	0.00070095	3.1961	0.0015551	4.6366	0.0022561	486.92025505742447	34.359	0.27217	34.359	34.252	34.524	0					18	8	3	0	0	0	1.0156	1	14423	14423		2.8433	0.21205	1	455960	+		17968	11195	8622	8660	20924	20924					0.0184448188240367
LHYRMTSK	8	Unmodified	_LHYRMTSK_					0	0	0			REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|46|1|sense	REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|46|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	345.2382385134697	3	345.851655	1034.53313	-2.4367	-0.00084273	0.36401	0.00012589	-2.0727	-0.00071684	345.85184116159746	15.667	0.90404	15.667	15.405	16.309	0					55	28	2	0	0	0	2.3239	1	6575	6575		3.9444	0	1	658640	+		17969	14334	8623	8661	20925	20925					0.017249361482527092
LHYRMTSK	8	Unmodified	_LHYRMTSK_					0	0	0			REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|46|1|sense	REV__L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|46|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.2383605837822	3	345.851655	1034.53313	-1.2971	-0.00044862	-1.5655	-0.00054143	-2.8626	-0.00099005	345.8511749255907	13.561	0.96114	14.288	13.82	14.781	0.72639					48	30	2	0	0	0	2.3239	1	5613	5613		3.9444	0	1	1011900	+		17970	14334	8623	8661	20926	20926					0.017249361482527092
LIAATAFVTV	10	Unmodified	_LIAATAFVTV_					0	0	0			REV__tr|A0A553SIC6|A0A553SIC6_NIACIPeptidoglycanendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_14495PE=3SV=1	REV__tr|A0A553SIC6|A0A553SIC6_NIACIPeptidoglycanendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_14495PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	503.2669555544853	2	503.302593	1004.59063	0.75222	0.00037859	0.40228	0.00020247	1.1545	0.00058106	503.3029214646913	55.91	0.4	57.879	57.717	58.117	1.9684					23	12	3	0	0	0	0.12412	1	23497	23497		14.838	0	1	3471500	+		17971	14846	8624	8662	20927	20927					0.08852101625484465
LIADFLSGLV	10	Unmodified	_LIADFLSGLV_					0	0	0		ENST00000453505.6_1_20:48741597-48767785:-|nuORF;nc|ENSG00000240849|A5PLL7-2|PEDS1;ENSG00000240849|ENST00000371652|PEDS1	ENST00000453505.6_1_20:48741597-48767785:-|nuORF	ENST00000453505.6_1_20:48741597-48767785:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3118163943291	2	524.307875	1046.6012	2.3578	0.0012362	1.5922	0.00083478	3.95	0.002071	524.3087456655965	58.831	0.37126	60.8	60.633	61.004	1.969					22	11	2	0	0	0	0.21003	1	24668	24668		47.749	1.7277	1	3007700			17972	5334	8625	8663	20928	20928					0.07976084279880524
LIAEKPPR	8	Unmodified	_LIAEKPPR_					0	0	0			REV__tr|A0A553SLA0|A0A553SLA0_NIACIDUF2515domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20235PE=4SV=1	REV__tr|A0A553SLA0|A0A553SLA0_NIACIDUF2515domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20235PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1466247439384	2	462.287277	922.560001	0.3858	0.00017835	0.15172	7.014E-05	0.53753	0.00024849	462.287423180948	12.44	0.15066	13.228	13.124	13.275	0.78751					6	4	2	0	0	0	2.3239	1	5168	5168		5.7604	3.1829	1	1365600	+		17973	14981	8626	8664	20929	20929					0.09562368031083679
LIAELKRHER	10	Unmodified	_LIAELKRHER_					0	0	0		nc|ENSG00000177076|Q5QJU3-3|ACER2	nc|ENSG00000177076|Q5QJU3-3|ACER2	nc|ENSG00000177076|Q5QJU3-3|ACER2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2573425173759	3	422.254328	1263.74115	3.6203	0.0015287	-0.17084	-7.2137E-05	3.4495	0.0014566	422.2545082260562	90.833	0.78925	92.199	91.897	92.686	1.366					62	24	3	0	0	0	0.89803	1	38312	38312		0.77653	0	1	1037900			17974	7934	8627	8665	20930	20930					0.11983261336968098
LIAFSLASLA	10	Unmodified	_LIAFSLASLA_					0	0	0		tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3039733767509	2	503.302593	1004.59063	1.9725	0.00099275	0.028032	1.4109E-05	2.0005	0.0010069	503.3027719669472	58.186	0.35439	58.186	58.009	58.364	0					16	10	2	0	0	0	0.32206	1	24270	24270		37.974	3.5723	1	1036900			17975	17186	8628	8666	20931	20931					0.08852101625461728
LIAFSLASLA	10	Unmodified	_LIAFSLASLA_					0	0	0		tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.3036987185478	2	503.302593	1004.59063	2.8291	0.0014239	-0.036219	-1.8229E-05	2.7929	0.0014057	503.302362220763	57.674	0.28698	57.997	57.822	58.109	0.32298					14	8	2	0	0	0	0.57775	1	24188	24188		24.021	2.2739	1	1199500			17976	17186	8628	8666	20932	20932					0.08852101625461728
LIAFSLASLA	10	Unmodified	_LIAFSLASLA_					0	0	0		tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	tr|A0A7D6ZX88|A0A7D6ZX88_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12345PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3042785525322	2	503.302593	1004.59063	1.0877	0.00054744	1.0576	0.00053231	2.1453	0.0010797	503.30339502104033	56.5	0.33968	57.915	57.753	58.093	1.4145					23	10	3	0	0	0	0.11481	1	23678	23678		61.357	13.012	1	3037500			17977	17186	8628	8666	20933	20933					0.08852101625461728
LIAGEALSLL	10	Unmodified	_LIAGEALSLL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3087951540947	2	500.307875	998.601197	2.6793	0.0013405	-0.3636	-0.00018191	2.3157	0.0011586	500.30798860009475	74.531	0.38292	76.325	76.08	76.463	1.7941					28	11	3	0	0	0	0.081078	1	31244	31244		67.344	5.9864	1	1663800			17978	3616	8629	8667	20934	20934					0.10184084279910621
LIAIPVFH	8	Unmodified	_LIAIPVFH_					0	0	0			REV__tr|A0A553SS30|A0A553SS30_NIACIAzlDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02280PE=4SV=1	REV__tr|A0A553SS30|A0A553SS30_NIACIAzlDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02280PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	303.8561889529228	3	303.856734	908.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.812	1	35.635	35.135	36.135	1.8227								0	0	0	1.0178	1	14182	14182		1.8442	0	1		+		17979	15190	8630	8668	20935	20935					0.0904417100775845
LIAKARYLRK	10	Unmodified	_LIAKARYLRK_					0	0	0		nc|ENSG00000100890|O15091-2|PRORP;ENSG00000100890|ENST00000534898|PRORP	nc|ENSG00000100890|O15091-2|PRORP	nc|ENSG00000100890|O15091-2|PRORP	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2730895876884	3	411.27143	1230.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.487	1	54.459	53.959	54.959	1.9722								0	0	0	0.66254	1	21991	21991		0.15932	0	1				17980	1309	8631	8669	20936	20936					0.1862963010164549
LIAKARYLRK	10	Unmodified	_LIAKARYLRK_					0	0	0		nc|ENSG00000100890|O15091-2|PRORP;ENSG00000100890|ENST00000534898|PRORP	nc|ENSG00000100890|O15091-2|PRORP	nc|ENSG00000100890|O15091-2|PRORP	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2690612673759	3	411.27143	1230.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.732	1	54.704	54.204	55.204	1.9722								0	0	0	0.66254	1	22090	22090		0.15932	0	1				17981	1309	8631	8669	20937	20937					0.1862963010164549
LIALDDDKINI	11	Unmodified	_LIALDDDKINI_					0	0	0		tr|A0A553SSS3|A0A553SSS3_NIACIBiotin-independentmalonatedecarboxylasesubunitbetaOS=NialliacirculansOX=1397GN=mdcDPE=4SV=1	tr|A0A553SSS3|A0A553SSS3_NIACIBiotin-independentmalonatedecarboxylasesubunitbetaOS=NialliacirculansOX=1397GN=mdcDPE=4SV=1	tr|A0A553SSS3|A0A553SSS3_NIACIBiotin-independentmalonatedecarboxylasesubunitbetaOS=NialliacirculansOX=1397GN=mdcDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8538085818291	2	621.850635	1241.68672	2.8813	0.0017917	1.61	0.0010012	4.4913	0.0027929	621.8515329276165	60.975	0.25543	62.395	62.249	62.505	1.4196					16	7	3	0	0	0	0.58697	1	25606	25606		21.537	1.1224	1	983700			17982	16626	8632	8670	20938	20938					0.07554204674920584
LIAPEVGEPF	10	Unmodified	_LIAPEVGEPF_					0	0	0			REV__tr|A0A7D6ZUP7|A0A7D6ZUP7_9CLOTFamily1glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12770PE=3SV=1	REV__tr|A0A7D6ZUP7|A0A7D6ZUP7_9CLOTFamily1glycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12770PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.7427245974541	2	536.289682	1070.56481	2.6857	0.0014403	0.88606	0.00047519	3.5718	0.0019155	536.289502680109	76.558	0.19038	77.852	77.792	77.983	1.2938					6	5	2	0	0	0	0.12484	1	32158	32158		11.64	7.6959	1	464930	+		17983	15725	8633	8671	20939	20939					0.0323520738318166
LIAQGEFVMK	10	Unmodified	_LIAQGEFVMK_					0	0	0		ENST00000555711.5_1_12:25357018-25357243:+|nuORF;ENSG00000205707|ENST00000381356|ETFRF1	ENST00000555711.5_1_12:25357018-25357243:+|nuORF	ENST00000555711.5_1_12:25357018-25357243:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	568.3158447146416	2	568.312635	1134.61072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.627	1	48.958	48.458	49.458	0.33034								0	0	0	0.65836	1	20386	20386		6.7232	0.99131	1				17984	5186	8634	8672	20940	20940					0.048795292937711565
LIAQKLKHE	9	Unmodified	_LIAQKLKHE_					0	0	0		ENSG00000230561|ENST00000514853|CCDC192;nc|ENSG00000230561|P0DO97|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3318359255791	2	540.332216	1078.64988	1.5193	0.00082091	-2.2831	-0.0012336	-0.7638	-0.0004127	540.3310724957718	71.75	1.2066	71.75	71.446	72.653	0					53	37	2	0	0	0	0.83213	1	29819	29819		2.0598	0.21551	1	1220500			17985	5304	8635	8673	20941	20941					0.11369997639667417
LIAQKLKHE	9	Unmodified	_LIAQKLKHE_					0	0	0		ENSG00000230561|ENST00000514853|CCDC192;nc|ENSG00000230561|P0DO97|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3320800662041	2	540.332216	1078.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.301	1	71.301	70.801	71.801	0								0	0	0	0.42693	1	29694	29694		2.0598	0	1				17986	5304	8635	8673	20942	20942					0.11369997639667417
LIARVKYKY	9	Unmodified	_LIARVKYKY_					0	0	0		ENST00000273375.7_1_3:120407987-120408086:-|nuORF	ENST00000273375.7_1_3:120407987-120408086:-|nuORF	ENST00000273375.7_1_3:120407987-120408086:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1538879275322	3	385.241248	1152.70191	2.1326	0.00082155	-4.0861	-0.0015741	-1.9536	-0.00075259	385.2382469162345	64.2	0.55347	65.607	65.401	65.954	1.4071					26	17	3	0	0	0	0.11938	1	26939	26939		0.26902	0.033176	1	1164900			17987	5684	8636	8674	20943	20943					0.13167161053411292
LICEELHI	8	Unmodified	_LICEELHI_					0	0	0			REV__PDIK1L|p.M304Lfs*18|1|0.3|ENSG00000175087|chr1:26122459-26122471|GAATGAAACAACT/-|frameshift_variant	REV__PDIK1L|p.M304Lfs*18|1|0.3|ENSG00000175087|chr1:26122459-26122471|GAATGAAACAACT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2596313357353	2	485.257328	968.500103	1.6869	0.00081859	0.56043	0.00027195	2.2473	0.0010905	485.2576903914036	41.856	1.6619	43.749	43.269	44.931	1.8927					87	53	2	0	0	0	0.88409	1	17872	17872		6.3541	0	1	4966200	+		17988	11142	8637	8675	20944	20944					0.014593093055623285
LICLFWLLL	9	Unmodified	_LICLFWLLL_					0	0	0		L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|199|1|anti-sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|199|1|anti-sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|199|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3441650271416	2	567.343206	1132.67186	3.8944	0.0022094	-2.4538	-0.0013921	1.4406	0.00081729	567.3420331229272	96.593	0.14835	96.877	96.774	96.923	0.28442					6	4	2	0	0	0	0.24585	1	40653	40653		28.173	7.302	1	1192300			17989	7757	8638	8676	20945	20945					0.1108308606387709
LICPVPLHP	9	Unmodified	_LICPVPLHP_					0	0	0			REV__ENST00000488418.2_1_1:1208367-1208592:-|nuORF	REV__ENST00000488418.2_1_1:1208367-1208592:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	330.1916686892509	3	330.193129	987.557558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.59	1	101.59	101.09	102.09	0								0	0	0	0.42693	1	42540	42540		1.1933	0.735	1		+		17990	13410	8639	8677	20946	20946					0.06328196301774369
LIDAEWSHFF	10	Unmodified	_LIDAEWSHFF_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|102|3|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|102|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2079345583916	3	422.204751	1263.59242	2.9491	0.0012451	2.9635	0.0012512	5.9126	0.0024963	422.2060685072879	92.081	0.45073	92.272	92.014	92.465	0.19041					31	13	3	0	0	0	0.80072	1	38532	38532		12.175	1.1095	1	1533000	+		17991	14341	8640	8678	20947	20947					-0.02882889356578744
LIDEVMVLL	9	Unmodified	_LIDEVMVLL_					0	0	0		ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8055297732353	2	522.804111	1043.59367	3.875	0.0020259	-0.97623	-0.00051038	2.8988	0.0015155	522.803514530935	97.028	0.17224	97.312	97.218	97.39	0.28442					12	6	3	0	0	0	0.09539	1	40828	40828		50.855	6.448	1	8452200			17992	896	8641	8679	20948	20948					0.0736160868798379
LIDEVMVLL	9	Unmodified	_LIDEVMVLL_					0	0	0		ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.8065063357353	2	522.804111	1043.59367	3.2153	0.001681	0.77647	0.00040594	3.9918	0.0020869	522.8047385457978	96.908	0.15664	97.214	97.133	97.289	0.3062					9	4	3	0	0	0	0.12174	1	40769	40769		42.095	7.9921	1	5127500			17993	896	8641	8679	20949	20949					0.0736160868798379
LIDGYEIVL	9	Unmodified	_LIDGYEIVL_					0	0	0		tr|A0A553SLR5|A0A553SLR5_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21175PE=4SV=1	tr|A0A553SLR5|A0A553SLR5_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21175PE=4SV=1	tr|A0A553SLR5|A0A553SLR5_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21175PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1034.578540027142	1	1034.57684	1033.56956	2.3408	0.0024217	-1.5767	-0.0016312	0.76412	0.00079054	1034.5757147158786	63.079	0.31178	63.409	63.255	63.566	0.32974					14	9	2	0	0	0	0.5697	1	26456	26456		12.532	0.89125	1	301770			17994	16349	8642	8680	20950	20950					0.05412091525931828
LIDLMLLLY	9	Unmodified	_LIDLMLLLY_					0	0	0		ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8306152224541	2	553.830129	1105.6457	1.2785	0.00070807	0.60776	0.0003366	1.8863	0.0010447	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.77526	1	30390	30390		4.3292	2.2695	1	6275300			17995	6843	8643	8681	20951	20951					0.09710772101743714
LIDLMLLLY	9	Unmodified	_LIDLMLLLY_					0	0	0		ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8307372927666	2	553.830129	1105.6457	1.2808	0.00070934	0.013811	7.6487E-06	1.2946	0.00071698	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.83213	1	29208	29208		2.0598	0	1	2160700			17996	6843	8643	8681	20952	20952					0.09710772101743714
LIDLMLLLY	9	Unmodified	_LIDLMLLLY_					0	0	0		ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8312255740166	2	553.830129	1105.6457	1.9187	0.0010627	0.58182	0.00032223	2.5006	0.0013849	553.8302104494187	72.464	2.1267	72.789	71.785	73.912	0.32494					193	67	4	0	0	0	0.68551	2	30401	30317;30401		7.9102	3.1541	1	7300500			17997	6843	8643	8681	20953;20954	20954					0.09710772101743714
LIDLMLLLY	9	Unmodified	_LIDLMLLLY_					0	0	0		ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	ENST00000483636.5_1_3:151488357-151501690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8306152224541	2	553.830129	1105.6457	2.0306	0.0011246	0.28781	0.0001594	2.3184	0.001284	553.8298948523146	71.513	2.0266	72.854	72.054	74.08	1.3415					183	65	4	0	0	0	0.77526	1	30060	30060		4.3292	0.38484	1	7375800			17998	6843	8643	8681	20955	20955					0.09710772101743714
LIDMMVFIF	9	Unmodified	_LIDMMVFIF_					0	0	0			REV__ENST00000563645.1_1_16:19514794-19516450:-|nuORF	REV__ENST00000563645.1_1_16:19514794-19516450:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.2954589724541	2	564.795232	1127.57591	4.3899	0.0024794	-1.3643	-0.00077053	3.0256	0.0017089	564.7930445358292	90.464	0.25677	91.446	91.268	91.525	0.98157					12	7	2	0	0	0	0.116	1	38120	38120		2.3027	0	1	851960	+		17999	8504	8644	8682	20956	20956					0.017225701614734135
LIDQTGRPI	9	Unmodified	_LIDQTGRPI_					0	0	0			REV__tr|A0A553SKB9|A0A553SKB9_NIACIHistidine--tRNAligaseOS=NialliacirculansOX=1397GN=hisSPE=3SV=1	REV__tr|A0A553SKB9|A0A553SKB9_NIACIHistidine--tRNAligaseOS=NialliacirculansOX=1397GN=hisSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7909423708916	2	506.792924	1011.57129	2.7722	0.0014049	-1.78	-0.0009021	0.99217	0.00050283	507.29469881826077	77.61	0.41412	78.891	78.663	79.077	1.2809					25	12	3	0	0	0	0.54523	1	32537	32537		13.508	4.1604	1	1301300	+		18000	14947	8645	8683	20957	20957					0.06597145334569632
LIDVKGSVIK	10	Unmodified	_LIDVKGSVIK_					0	0	0			REV__nc|ENSG00000134333|P00338-4|LDHA	REV__nc|ENSG00000134333|P00338-4|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	357.8975707888603	3	357.897258	1070.66995	-0.08997	-3.22E-05	0.66297	0.00023728	0.573	0.00020508	357.8975208296575	12.76	0.18213	12.849	12.74	12.922	0.089381					13	5	3	0	0	0	0.18015	1	5291	5291		44.945	5.7317	1	3325500	+		18001	14439	8646	8684	20958	20958					0.1374374857962266
LIDVKGSVIK	10	Unmodified	_LIDVKGSVIK_					0	0	0			REV__nc|ENSG00000134333|P00338-4|LDHA	REV__nc|ENSG00000134333|P00338-4|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	357.8974792361259	3	357.897258	1070.66995	-1.4391	-0.00051505	1.5331	0.00054868	0.093963	3.3629E-05	357.89776178385034	12.364	0.24736	13.058	12.948	13.195	0.69396					21	7	4	0	0	0	0.078293	1	5128	5128		59.013	9.4856	1	5621100	+		18002	14439	8646	8684	20959	20959					0.1374374857962266
LIDVKGSVIK	10	Unmodified	_LIDVKGSVIK_					0	0	0			REV__nc|ENSG00000134333|P00338-4|LDHA	REV__nc|ENSG00000134333|P00338-4|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	357.8971435427666	3	357.897258	1070.66995	-0.30688	-0.00010983	-0.016121	-5.7696E-06	-0.323	-0.0001156	357.8972692922043	12.147	0.15785	12.935	12.845	13.003	0.78751					13	4	4	0	0	0	0.062288	1	5042	5042		83.278	16.197	1	5867500	+		18003	14439	8646	8684	20960	20960					0.1374374857962266
LIEDKHPLI	9	Unmodified	_LIEDKHPLI_					0	0	0		tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3175536990166	2	539.318774	1076.623	1.5412	0.00083119	-2.7933	-0.0015065	-1.2521	-0.00067529	539.3171026353033	95.438	0.42587	95.438	95.236	95.662	0					30	14	3	0	0	0	0.54523	1	39912	39912		13.508	4.1604	1	3850000			18004	16724	8647	8685	20961	20961					0.08774889028472899
LIEDKHPLI	9	Unmodified	_LIEDKHPLI_					0	0	0		tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	tr|A0A7D6VN62|A0A7D6VN62_9CLOTSAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16365PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	539.318774	1076.623	2.7326	0.0014737	-3.4875	-0.0018809	-0.75494	-0.00040715	539.3169195092834	95.065	0.52409	95.188	94.871	95.395	0.12331	-0.12492	-0.00035725	NaN	13.508	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2640100			18005	16724	8647	8685							0.08774889028472899
LIEDKLLILK	10	Unmodified	_LIEDKLLILK_					0	0	0		tr|A0A7D6ZYS4|A0A7D6ZYS4_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17565PE=4SV=1	tr|A0A7D6ZYS4|A0A7D6ZYS4_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17565PE=4SV=1	tr|A0A7D6ZYS4|A0A7D6ZYS4_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17565PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3503906130791	2	599.394482	1196.77441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.33	1	100.51	100.01	101.01	0.18047								0	0	0	0.66176	1	42223	42223		1.4819	0	1				18006	17199	8648	8686	20962	20962					0.18389450336326263
LIEEGWLL	8	Unmodified	_LIEEGWLL_					0	0	0			REV__ENST00000531162.5_1_14:95600723-95607049:-|nuORF	REV__ENST00000531162.5_1_14:95600723-95607049:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.2680847048759	2	486.773668	971.532783	1.6032	0.00078041	1.6348	0.00079577	3.238	0.0015762	486.7742879506354	80.438	0.72003	82.155	81.848	82.568	1.7167					55	23	3	0	0	0	2.3239	1	33854	33854		19.439	0	1	20787000	+		18007	13708	8649	8687	20963	20963					0.0458783970004788
LIEEGWLL	8	Unmodified	_LIEEGWLL_					0	0	0			REV__ENST00000531162.5_1_14:95600723-95607049:-|nuORF	REV__ENST00000531162.5_1_14:95600723-95607049:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	486.773668	971.532783	2.9952	0.001458	0.95669	0.00046569	3.9519	0.0019237	486.7739491876764	80.882	0.60799	82.115	81.894	82.502	1.2332	-0.020052	-0.00027829	NaN	19.439	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14346000	+		18008	13708	8649	8687							0.0458783970004788
LIEFCYTI	8	Unmodified	_LIEFCYTI_					0	0	0		ENSG00000066185|ENST00000372565|ZMYND12	ENSG00000066185|ENST00000372565|ZMYND12	ENSG00000066185|ENST00000372565|ZMYND12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2538024783134	2	501.254254	1000.49396	2.5014	0.0012538	-2.9909	-0.0014992	-0.4895	-0.00024536	501.2527651002056	71.156	0.38628	72.497	72.333	72.719	1.3415					31	12	3	0	0	0	0.80889	2	29936	29887;29936		19.439	3.6708	1	8976200			18009	802	8650	8688	20964;20965	20965					-0.006272089259823588
LIEGIHEEL	9	Unmodified	_LIEGIHEEL_					0	0	0			REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7869750857353	2	526.784764	1051.55498	3.4134	0.0017981	0.0024902	1.3118E-06	3.4159	0.0017994	526.7848528490592	81.456	0.34003	82.69	82.471	82.811	1.2332					17	10	2	0	0	0	0.68551	1	34211	34211		7.9102	0.62092	1	1173800	+		18010	15479	8651	8689	20966	20966					0.03126019377805278
LIEGIHEEL	9	Unmodified	_LIEGIHEEL_					0	0	0			REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.784764	1051.55498	3.4134	0.0017981	0.0024902	1.3118E-06	3.4159	0.0017994	526.7848528490592	81.456	0.34003	82.69	82.471	82.811	1.2332	0.017197	-6.9336E-05	NaN	7.9102	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1173800	+		18011	15479	8651	8689							0.03126019377805278
LIEGIHEEL	9	Unmodified	_LIEGIHEEL_					0	0	0			REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	REV__tr|A0A7D6VT76|A0A7D6VT76_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06360PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.784764	1051.55498	2.6943	0.0014193	0.9227	0.00048606	3.617	0.0019054	526.7859380499656	80.959	0.24935	82.655	82.517	82.766	1.6959	-0.017197	0.00090017	NaN	7.9102	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621930	+		18012	15479	8651	8689							0.03126019377805278
LIEHLFHPSG	10	Unmodified	_LIEHLFHPSG_					0	0	0			REV__VPS13B-CPQ|2|fusion	REV__VPS13B-CPQ|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8063842654228	2	575.306198	1148.59784	1.2624	0.00072629	-3.1583	-0.001817	-1.8959	-0.0010907	575.304317995838	69.363	0.28443	69.685	69.562	69.847	0.32224					19	8	3	0	0	0	0.85124	1	29050	29050		6.7232	2.3939	1	631730	+		18013	9849	8652	8690	20967	20967					0.029488342258673583
LIEHLFHPSG	10	Unmodified	_LIEHLFHPSG_					0	0	0			REV__VPS13B-CPQ|2|fusion	REV__VPS13B-CPQ|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	575.306198	1148.59784	1.428	0.00082151	-3.3688	-0.0019381	-1.9409	-0.0011166	575.30407593052	69.775	0.22247	69.775	69.675	69.897	0	0.044749	-0.00015742	NaN	6.7232	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513070	+		18014	9849	8652	8690							0.029488342258673583
LIEHLFHPSG	10	Unmodified	_LIEHLFHPSG_					0	0	0			REV__VPS13B-CPQ|2|fusion	REV__VPS13B-CPQ|2|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	575.306198	1148.59784	1.2624	0.00072629	-3.1583	-0.001817	-1.8959	-0.0010907	575.304317995838	69.363	0.28443	69.685	69.562	69.847	0.32224	-0.044749	8.4781E-05	NaN	6.7232	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	631730	+		18015	9849	8652	8690							0.029488342258673583
LIERFRPKKMP	11	Unmodified	_LIERFRPKKMP_					0	0	0			REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9233886599541	2	707.921206	1413.82786	2.369	0.001677	1.2924	0.00091489	3.6613	0.0025919	707.9216308197272	83.844	0.55301	84.114	83.925	84.478	0.27029					28	17	2	0	0	0	1.039	1	35068	35068		1.3295	0	1	857340	+		18016	14069	8653	8691	20968	20968					0.13749924567173366
LIERFRPKKMP	11	Unmodified	_LIERFRPKKMP_					0	0	0			REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	707.921206	1413.82786	2.5365	0.0017956	0.83183	0.00058887	3.3683	0.0023845	707.92207433192	83.998	0.48985	83.998	83.816	84.306	0	-0.058032	-0.00043637	NaN	1.3295	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	921060	+		18017	14069	8653	8691							0.13749924567173366
LIERFRPKKMP	11	Unmodified	_LIERFRPKKMP_					0	0	0			REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	REV__ENST00000590607.1_1_19:29704218-29706237:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	707.921206	1413.82786	2.369	0.001677	1.2924	0.00091489	3.6613	0.0025919	707.9216308197272	83.844	0.55301	84.114	83.925	84.478	0.27029	0.058032	0.00021567	NaN	1.3295	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	857340	+		18018	14069	8653	8691							0.13749924567173366
LIERGLVWF	9	Unmodified	_LIERGLVWF_					0	0	0			REV__L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|86|1|anti-sense	REV__L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|86|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2235290408134	3	378.221965	1131.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.03	1	29.309	28.809	29.809	1.2789								0	0	0	0.42693	1	11747	11747		2.4985	0	1		+		18019	14337	8654	8692	20969	20969					0.08350899127981393
LIERIEEFLKI	11	Unmodified	_LIERIEEFLKI_					0	0	0			REV__ENSG00000166046|ENST00000299045|TCP11L2	REV__ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2823058962822	3	468.28166	1401.82315	2.9998	0.0014048	-0.38012	-0.000178	2.6197	0.0012268	468.2811908167424	72.876	1.4671	74.687	74.385	75.852	1.8101					118	46	4	0	0	0	0.76	1	30594	30594		10.016	0	1	2478900	+		18020	10809	8655	8693	20970	20970					0.13831318905408807
LIEVRSLPRL	10	Unmodified	_LIEVRSLPRL_					0	0	0			REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2563049197197	3	399.255557	1194.74484	0.40191	0.00016046	1.4539	0.00058048	1.8558	0.00074094	399.25450149790606	23.233	0.58392	24.884	24.716	25.3	1.6511					35	18	3	0	0	0	0.88508	1	9680	9680		3.0723	1.6171	1	3000900	+		18021	9628	8656	8694	20971	20971					0.15525931110823876
LIEVRSLPRL	10	Unmodified	_LIEVRSLPRL_					0	0	0			REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	REV__nc|ENSG00000123989|Q8IZ52-2|CHPF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	399.255557	1194.74484	0.93586	0.00037365	3.3199	0.0013255	4.2558	0.0016991	399.25576314462717	24.92	0.58684	25.172	24.965	25.552	0.25197	0.14373	0.00061259	NaN	3.0723	40	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1598200	+		18022	9628	8656	8694							0.15525931110823876
LIFKIIVP	8	Unmodified	_LIFKIIVP_					0	0	0			REV__nc|ENSG00000144554|Q9BXW9-3|FANCD2	REV__nc|ENSG00000144554|Q9BXW9-3|FANCD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.6484252810478	1	942.638652	941.631375	2.9765	0.0028058	2.7527	0.0025948	5.7292	0.0054006	942.6401042426721	109.56	0.4453	109.72	109.54	109.98	0.15898					22	16	2	0	0	0	0.89176	1	47626	47626		0.79363	0	1	5899300	+		18023	10253	8657	8695	20972	20972					0.15822487735761115
LIFLDGERE	9	Unmodified	_LIFLDGERE_					0	0	0		nc|ENSG00000164199|Q8WXG9-2|ADGRV1;ENSG00000164199|ENST00000405460|ADGRV1;ADGRV1|p.G6098Qfs*11|1|0.02|ENSG00000164199|chr5:91072584-91072585|-/GC|frameshift_variant	nc|ENSG00000164199|Q8WXG9-2|ADGRV1	nc|ENSG00000164199|Q8WXG9-2|ADGRV1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	546.3269531130791	2	546.290214	1090.56587	1.9304	0.0010545	-3.9305	-0.0021472	-2.0001	-0.0010926	546.7899117374984	72.378	0.31159	72.703	72.547	72.859	0.32494					22	9	3	0	0	0	0.11071	1	30270	30270		10.824	0	1	456460			18024	3760	8658	8696	20973	20973					0.024214217521148385
LIFSPPTVHI	10	Unmodified	_LIFSPPTVHI_					0	0	0			REV__OR52N5|p.R140Lfs*18|1|0.21|ENSG00000181009|chr11:5778210-5778216|GCATAAC/-|frameshift_variant	REV__OR52N5|p.R140Lfs*18|1|0.21|ENSG00000181009|chr11:5778210-5778216|GCATAAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3296996951103	2	562.329142	1122.64373	1.9166	0.0010778	-0.83752	-0.00047096	1.0791	0.00060681	562.3287963984375	77.336	0.34541	77.653	77.543	77.888	0.31653					17	10	2	0	0	0	0.75645	1	32353	32353		15.847	0	1	942180	+		18025	11311	8659	8697	20974	20974					0.08731479408129417
LIGEFLEKV	9	Unmodified	_LIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3105956912041	2	524.307875	1046.6012	2.5702	0.0013476	2.2019	0.0011545	4.7721	0.0025021	524.3091618112544	59.351	0.40237	60.771	60.556	60.958	1.4196					27	12	3	0	0	0	0.1052	2	24900	24854;24900		47.594	3.9816	1	3915900			18026	7842	8660	8698	20975;20976	20976					0.07976084279880524
LIGEFLEKV	9	Unmodified	_LIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3098632693291	2	524.307875	1046.6012	2.3578	0.0012362	1.5922	0.00083478	3.95	0.002071	524.3087456655965	58.831	0.37126	60.8	60.633	61.004	1.969					22	11	2	0	0	0	0.11669	1	24715	24715		43.772	7.6454	1	3007700			18027	7842	8660	8698	20977	20977					0.07976084279880524
LIGEITLYE	9	Unmodified	_LIGEITLYE_					0	0	0			REV__tr|A0A7D6ZK05|A0A7D6ZK05_9CLOT1-deoxy-D-xylulose5-phosphatereductoisomeraseOS=ClostridiumintestinaleOX=36845GN=dxrPE=3SV=1	REV__tr|A0A7D6ZK05|A0A7D6ZK05_9CLOT1-deoxy-D-xylulose5-phosphatereductoisomeraseOS=ClostridiumintestinaleOX=36845GN=dxrPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	526.3853027224541	2	525.789515	1049.56448	2.8117	0.0014784	0.23405	0.00012306	3.0458	0.0016014	525.7899673080757	90.708	0.16317	90.917	90.866	91.03	0.20904					5	4	2	0	0	0	0.11812	1	38040	38040		4.756	0	1	244270	+		18028	15671	8661	8699	20978	20978					0.041677876633457345
LIGIPFICL	9	Unmodified	_LIGIPFICL_					0	0	0		tr|A0A553SQ41|A0A553SQ41_NIACISensordomain-containingdiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_18290PE=4SV=1	tr|A0A553SQ41|A0A553SQ41_NIACISensordomain-containingdiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_18290PE=4SV=1	tr|A0A553SQ41|A0A553SQ41_NIACISensordomain-containingdiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_18290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.8002807497978	2	494.798632	987.582711	3.2706	0.0016183	-0.070223	-3.4746E-05	3.2003	0.0015835	494.79858354315303	89.374	0.51236	89.597	89.327	89.839	0.2236					38	15	3	0	0	0	0.84963	2	37465	37465;37523		0.6015	0	1	3717500			18029	16498	8662	8700	20979;20980	20979					0.0884225110432908
LIGIYFTALFH	11	Unmodified	_LIGIYFTALFH_					0	0	0			REV__ENST00000606327.1_1_6:138178975-138179167:-|nuORF	REV__ENST00000606327.1_1_6:138178975-138179167:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	648.3667480349541	2	647.863349	1293.71214	1.6647	0.0010785	2.8317	0.0018345	4.4964	0.0029131	647.8654415474286	41.611	0.21264	41.928	41.794	42.006	0.31683					11	6	2	0	0	0	0.83203	1	17484	17484		13.906	2.4113	1	419660	+		18030	14138	8663	8701	20981	20981					0.07703723987970079
LIGLVTVE	8	Unmodified	_LIGLVTVE_					0	0	0			REV__ENST00000358812.8_1_6:96034781-96034823:+|nuORF	REV__ENST00000358812.8_1_6:96034781-96034823:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	843.5194579958916	1	843.518596	842.51132	1.6724	0.0014107	-3.25	-0.0027414	-1.5776	-0.0013308	843.5176513338604	67.366	0.28146	67.366	67.288	67.569	0					14	8	2	0	0	0	0.52797	1	28084	28084		45.75	0	1	386210	+		18031	12580	8664	8702	20982	20982					0.08376454671338252
LIGQRHKRRF	10	Unmodified	_LIGQRHKRRF_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|222|1|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|222|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.6021911501884	3	437.602062	1309.78436	3.1094	0.0013607	-2.5905	-0.0011336	0.51886	0.00022706	437.60085348382677	93.428	1.2555	93.596	92.964	94.22	0.16835					74	38	3	0	0	0	0.89803	1	39189	39189		0.69767	0.19171	1	741140	+		18032	14182	8665	8703	20983	20983					0.14185495904916934
LIGVSILSLV	10	Unmodified	_LIGVSILSLV_					0	0	0		tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	506.7974120974541	2	507.333893	1012.65323	1.967	0.00099794	0.56934	0.00028885	2.5364	0.0012868	507.33407797954914	73.157	0.40752	73.157	72.933	73.341	0					22	12	2	0	0	0	0.058768	1	30478	30478		78.149	10.069	1	4374700			18033	17326	8666	8704	20984	20984					0.14741247693689274
LIGVSILSLV	10	Unmodified	_LIGVSILSLV_					0	0	0		tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	506.7978393435478	2	507.333893	1012.65323	2.2851	0.0011593	0.4519	0.00022926	2.737	0.0013886	507.33406586810355	72.58	0.4081	72.905	72.674	73.082	0.32494					22	12	2	0	0	0	0.1072	1	30344	30344		52.268	8.4101	1	4480800			18034	17326	8666	8704	20985	20985					0.14741247693689274
LIGVSILSLV	10	Unmodified	_LIGVSILSLV_					0	0	0		tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3359557986259	2	507.333893	1012.65323	2.4576	0.0012468	0.2475	0.00012556	2.7051	0.0013724	507.3339784838979	71.364	0.39104	72.705	72.482	72.873	1.3415					24	12	2	0	0	0	0.064236	1	29928	29928		100.37	11.468	1	15550000			18035	17326	8666	8704	20986	20986					0.14741247693689274
LIGVSILSLV	10	Unmodified	_LIGVSILSLV_					0	0	0		tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	tr|A0A7D7ADK3|A0A7D7ADK3_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23190PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.7981750369072	2	507.333893	1012.65323	0.97893	0.00049664	2.0394	0.0010347	3.0183	0.0015313	507.33488188798276	70.857	0.39124	72.695	72.503	72.894	1.8378					22	12	2	0	0	0	0.003652	1	29708	29708		112.59	12.222	1	13718000			18036	17326	8666	8704	20987	20987					0.14741247693689274
LIHEGPEWQ	9	Unmodified	_LIHEGPEWQ_					0	0	0			REV__ENST00000396478.3_1_1:46179937-46180075:-|nuORF	REV__ENST00000396478.3_1_1:46179937-46180075:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7720214724541	2	554.774731	1107.53491	1.0316	0.00057228	-3.4124	-0.0018931	-2.3808	-0.0013208	555.2753285418818	71.019	0.3986	72.842	72.667	73.065	1.824					40	12	5	0	0	0	0.44535	1	29817	29817		18.135	4.6271	1	5368100	+		18037	12849	8667	8705	20988	20988					-0.014557315621459566
LIHFWERL	8	Unmodified	_LIHFWERL_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3160888552666	2	557.313826	1112.6131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.035	1	59.004	58.504	59.504	1.9684								0	0	0	1.0178	1	23925	23925		24.674	3.8027	1				18038	5095	8668	8706	20989	20989					0.061297458137460126
LIHLLLRRQTL	11	Unmodified	_LIHLLLRRQTL_					0	0	0		nc|ENSG00000142973|P13584|CYP4B1;ENSG00000142973|ENST00000371923|CYP4B1	nc|ENSG00000142973|P13584|CYP4B1	nc|ENSG00000142973|P13584|CYP4B1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	344.8868896365166	4	344.727861	1374.88234	1.0718	0.00036948	2.7683	0.00095431	3.8401	0.0013238	344.7283868758324	40.587	0.59647	41.898	41.756	42.353	1.3102					29	18	2	0	0	0	0.14606	1	17184	17184		2.6312	0.37851	1	1063300			18039	3012	8669	8707	20990	20990					0.20989259710245278
LIHLRGMR	8	Unmodified	_LIHLRGMR_					0	0	0			REV__ENSG00000204950|ENST00000378075|LRRC10B	REV__ENSG00000204950|ENST00000378075|LRRC10B	MSMS	GG20161007_CRH_Patient100_A02_02	2	498.3003723025322	2	498.300196	994.585839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.069	1	53.392	52.892	53.892	0.32283								0	0	0	1.0178	1	22232	22232		5.7604	0	1		+		18040	11806	8670	8708	20991	20991					0.08832939001717932
LIHRYEVFEH	10	Unmodified	_LIHRYEVFEH_					0	0	0			REV__nc|ENSG00000120868|O14727-5|APAF1	REV__nc|ENSG00000120868|O14727-5|APAF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2332031130791	3	448.234933	1341.68297	1.8406	0.00082503	-3.895	-0.0017459	-2.0544	-0.00092085	448.2329795091776	58.962	0.31525	58.962	58.784	59.099	0					22	9	3	0	0	0	0.89646	1	24596	24596		0.77653	0	1	1081300	+		18041	9580	8671	8709	20992	20992					0.025795796917009284
LIIDEIHLL	9	Unmodified	_LIIDEIHLL_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8307372927666	2	539.828975	1077.6434	1.9775	0.0010675	2.4285	0.001311	4.406	0.0023785	539.8302969820113	77.618	0.2493	77.935	77.796	78.045	0.31653					11	7	2	0	0	0	0.20244	1	32442	32442		44.407	0	1	1263500			18042	1775	8672	8710	20993	20993					0.10768059688280118
LIIDEIHLL	9	Unmodified	_LIIDEIHLL_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8322631716728	2	539.828975	1077.6434	2.6697	0.0014412	3.4147	0.0018434	6.0844	0.0032845	539.8310182171756	76.566	0.34556	77.86	77.699	78.045	1.2938					30	10	4	0	0	0	0.1109	1	32143	32143		60.39	0	1	2303000			18043	1775	8672	8710	20994	20994					0.10768059688280118
LIIKYKDEIL	10	Unmodified	_LIIKYKDEIL_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	624.2370483279228	2	624.384114	1246.75368	1.8302	0.0011427	1.2501	0.00078055	3.0803	0.0019233	624.3846731857259	96.814	0.089577	96.814	96.772	96.862	0					4	2	2	0	0	0	0.12475	1	40458	40458		12.532	0	1	683310	+		18044	10731	8673	8711	20995	20995					0.14016859956655026
LIIKYKDEIL	10	Unmodified	_LIIKYKDEIL_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	624.384114	1246.75368	2.6203	0.0016361	1.8773	0.0011721	4.4975	0.0028082	624.3851031096261	96.696	0.12134	96.801	96.725	96.846	0.105	0.015417	0.00095963	NaN	12.532	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1076900	+		18045	10731	8673	8711							0.14016859956655026
LIIKYKDEIL	10	Unmodified	_LIIKYKDEIL_					0	0	0			REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	REV__nc|ENSG00000164304|Q8TC20-2|CAGE1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	624.384114	1246.75368	3.5752	0.0022323	-2.4037	-0.0015009	1.1715	0.00073147	624.3816971582778	96.456	0.124	96.741	96.682	96.806	0.28442	-0.044461	-0.0043864	NaN	12.532	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2137100	+		18046	10731	8673	8711							0.14016859956655026
LIILGPLYV	9	Unmodified	_LIILGPLYV_					0	0	0			REV__nc|ENSG00000141655|Q9Y6Q6-4|TNFRSF11A	REV__nc|ENSG00000141655|Q9Y6Q6-4|TNFRSF11A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	500.2910034060478	2	500.825704	999.636855	2.3154	0.0011596	-1.7767	-0.0008898	0.53875	0.00026982	500.8246135672681	64.244	0.46804	66.172	65.857	66.325	1.928					21	14	2	0	0	0	0.116	1	26914	26914		0	0	1	593850	+		18047	10162	8674	8712	20996	20996					0.13702166527559712
LIIQRPIWL	9	Unmodified	_LIIQRPIWL_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|352|3|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|352|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	384.5822326540947	3	384.581493	1150.72265	0.84647	0.00032554	1.8614	0.00071584	2.7078	0.0010414	384.5820342608022	25.621	0.85708	25.873	25.428	26.285	0.25197					89	27	5	0	0	0	0.84963	1	10657	10657		0.26902	0.033176	1	15357000	+		18048	14261	8675	8713	20997	20997					0.15331751433086538
LIISKIYFL	9	Unmodified	_LIISKIYFL_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|98|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|98|2|sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|98|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	555.3768188357353	2	555.352086	1108.68962	2.8087	0.0015598	-0.20893	-0.00011603	2.5998	0.0014438	555.3518410762648	84.998	0.46016	86.594	86.311	86.771	1.5962					54	17	4	0	0	0	0.116	1	35532	35532		9.3474	0	1	62070000			18049	7633	8676	8714	20998	20998					0.13962124590375424
LIISLIDKFIV	11	Unmodified	_LIISLIDKFIV_					0	0	0			REV__tr|A0A7D7A1I3|A0A7D7A1I3_9CLOTDUF948domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15460PE=4SV=1	REV__tr|A0A7D7A1I3|A0A7D7A1I3_9CLOTDUF948domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15460PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	425.2760192751884	3	425.275847	1272.80571	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.931	1	59.257	58.757	59.757	0.32553								0	0	0	0.63775	1	24695	24695		0.50596	0.34663	1		+		18050	15826	8677	8715	20999	20999					0.18022023370417628
LIISSLKML	9	Unmodified	_LIISSLKML_					0	0	0			REV__ENST00000446553.2_1_12:6959577-6960430:-|nuORF	REV__ENST00000446553.2_1_12:6959577-6960430:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3257018923759	2	509.322471	1016.63039	3.0756	0.0015665	0.16214	8.2581E-05	3.2378	0.0016491	509.32271327798026	69.904	1.2932	71.257	70.99	72.284	1.3536					110	40	6	0	0	0	0.09539	1	29283	29283		50.855	0.92203	1	55780000	+		18051	13107	8678	8716	21000	21000					0.1227390530456205
LIIVRVTA	8	Unmodified	_LIIVRVTA_					0	0	0			REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	REV__nc|ENSG00000165194|Q8TAB3-3|PCDH19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	884.5947143435478	1	884.592764	883.585488	1.1598	0.0010259	0.56778	0.00050226	1.7276	0.0015282	884.5931722944027	107.78	0.28372	107.78	107.67	107.95	0					52	15	5	0	0	0	0.89178	1	46255	46255		0.69038	0	1	2353200000	+		18052	8351	8679	8717	21001	21001					0.13903842553520462
LIIYTTVLPIL	11	Unmodified	_LIIYTTVLPIL_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2762023806572	3	420.272214	1257.79481	2.936	0.0012339	1.7557	0.00073786	4.6917	0.0019718	420.2733707292667	92.378	0.46343	92.546	92.281	92.744	0.16835					45	14	4	0	0	0	1.0388	1	38743	38743		0.50596	0.27011	1	11168000	+		18053	9412	8680	8718	21002	21002					0.17622620996144178
LIIYTTVLPIL	11	Unmodified	_LIIYTTVLPIL_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2783080935478	3	420.272214	1257.79481	3.3589	0.0014116	2.9581	0.0012432	6.3169	0.0026548	420.2740252311794	91.325	0.39603	92.691	92.471	92.867	1.366					31	12	3	0	0	0	1.0357	1	38407	38407		1.4551	1.2958	1	3143800	+		18054	9412	8680	8718	21003	21003					0.17622620996144178
LIKAFKYLWT	10	Unmodified	_LIKAFKYLWT_					0	0	0			REV__L1ME1_dup14741|chr8:25510836-25512219:-|1.7462564563017426|0.2188578600898351|3.0|428.0|44|2|sense	REV__L1ME1_dup14741|chr8:25510836-25512219:-|1.7462564563017426|0.2188578600898351|3.0|428.0|44|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8831664919853	2	641.881542	1281.74853	1.9822	0.0012723	1.1726	0.00075269	3.1548	0.002025	641.8820510835203	81.341	2.8576	81.632	80.778	83.635	0.29056					269	92	4	0	0	0	0.89803	1	34319	34319		1.6526	0	1	11140000	+		18055	14282	8681	8719	21004	21004					0.1189260088467563
LIKECENTN	9	Unmodified	_LIKECENTN_					0	0	0		ENSG00000152402|ENST00000526355|GUCY1A2;nc|ENSG00000152402|P33402-3|GUCY1A2;nc|ENSG00000152402|P33402-2|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2593871951103	2	532.258056	1062.50156	2.0066	0.001068	0.99773	0.00053105	3.0043	0.0015991	532.2583627042306	65.894	0.42729	67.802	67.586	68.014	1.9085					22	13	2	0	0	0	0.61249	1	27630	27630		10.824	2.2306	1	2481000			18056	3325	8682	8720	21005	21005					-0.027191013963374644
LIKECENTN	9	Unmodified	_LIKECENTN_					0	0	0		ENSG00000152402|ENST00000526355|GUCY1A2;nc|ENSG00000152402|P33402-3|GUCY1A2;nc|ENSG00000152402|P33402-2|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	ENSG00000152402|ENST00000526355|GUCY1A2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	532.258056	1062.50156	2.0481	0.0010901	1.5954	0.00084915	3.6435	0.0019393	532.2593260711144	66.268	0.39574	67.657	67.478	67.874	1.3888	-0.072779	0.00037493	NaN	10.824	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1818100			18057	3325	8682	8720							-0.027191013963374644
LIKEQRILY	9	Unmodified	_LIKEQRILY_					0	0	0		tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	392.1142150759697	3	392.576408	1174.70739	4.0121	0.0015751	-2.5116	-0.00098601	1.5005	0.00058907	392.5752587257805	87.504	0.15269	88.596	88.49	88.643	1.0918					6	4	2	0	0	0	0.11938	1	36882	36882		0.26902	0.1097	1	361330			18058	16736	8683	8721	21006	21006					0.12702839845223934
LIKEQRILY	9	Unmodified	_LIKEQRILY_					0	0	0		tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	tr|A0A7D6VNJ5|A0A7D6VNJ5_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12840PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	392.576408	1174.70739	0.74345	0.00029186	-1.1487	-0.00045096	-0.40527	-0.0001591	392.5764276581127	88.319	0.3031	88.319	88.211	88.514	0	-0.23149	0.0015316	NaN	0.26902	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	817880			18059	16736	8683	8721							0.12702839845223934
LIKEYGFTL	9	Unmodified	_LIKEYGFTL_					0	0	0		tr|A0A7D6VST8|A0A7D6VST8_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10530PE=4SV=1	tr|A0A7D6VST8|A0A7D6VST8_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10530PE=4SV=1	tr|A0A7D6VST8|A0A7D6VST8_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10530PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.8149291872978	2	542.307875	1082.6012	2.0104	0.0010902	3.5849	0.0019441	5.5953	0.0030344	542.3102886351528	66.243	0.15321	67.632	67.566	67.719	1.3888					5	4	2	0	0	0	0.08828	1	27802	27802		21.747	5.8995	1	1182200			18060	16885	8684	8722	21007	21007					0.06320084279923321
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9402343630791	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.94	1	102.94	102.44	103.44	0								0	0	0	0.66264	1	43153	43153		0	0	1		+		18061	15658	8685	8723	21008	21008					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9422485232353	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.07	1	103.07	102.57	103.57	0								0	0	0	0.66264	1	43214	43214		0	0	1		+		18062	15658	8685	8723	21009	21009					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9435912966728	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.17	1	103.17	102.67	103.67	0								0	0	0	0.66264	1	43266	43266		0	0	1		+		18063	15658	8685	8723	21010	21010					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9421264529228	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.27	1	103.27	102.77	103.77	0								0	0	0	0.66264	1	43320	43320		0	0	1		+		18064	15658	8685	8723	21011	21011					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9433471560478	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.39	1	103.39	102.89	103.89	0								0	0	0	0.66264	1	43381	43381		0	0	1		+		18065	15658	8685	8723	21012	21012					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9429809451103	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.48	102.98	103.98	0								0	0	0	0.66264	1	43447	43447		0	0	1		+		18066	15658	8685	8723	21013	21013					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9427368044853	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.58	1	103.58	103.08	104.08	0								0	0	0	0.66264	1	43511	43511		0	0	1		+		18067	15658	8685	8723	21014	21014					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9432250857353	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.73	1	103.73	103.23	104.23	0								0	0	0	0.66264	1	43614	43614		0	0	1		+		18068	15658	8685	8723	21015	21015					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9437133669853	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.84	1	103.84	103.34	104.34	0								0	0	0	0.66264	1	43690	43690		0	0	1		+		18069	15658	8685	8723	21016	21016					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9422485232353	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.93	1	103.93	103.43	104.43	0								0	0	0	0.66264	1	43758	43758		0	0	1		+		18070	15658	8685	8723	21017	21017					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9423705935478	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.02	1	104.02	103.52	104.52	0								0	0	0	0.66264	1	43821	43821		0	0	1		+		18071	15658	8685	8723	21018	21018					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9385864138603	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.29	1	104.29	103.79	104.79	0								0	0	0	0.66264	1	43980	43980		0	0	1		+		18072	15658	8685	8723	21019	21019					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9417602419853	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.4	1	104.4	103.9	104.9	0								0	0	0	0.66264	1	44042	44042		0	0	1		+		18073	15658	8685	8723	21020	21020					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9424316287041	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.49	103.99	104.99	0								0	0	0	0.66264	1	44108	44108		0	0	1		+		18074	15658	8685	8723	21021	21021					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9422485232353	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.6	1	104.6	104.1	105.1	0								0	0	0	0.66264	1	44187	44187		0	0	1		+		18075	15658	8685	8723	21022	21022					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9419433474541	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.7	1	104.7	104.2	105.2	0								0	0	0	0.66264	1	44248	44248		0	0	1		+		18076	15658	8685	8723	21023	21023					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9426147341728	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.79	1	104.79	104.29	105.29	0								0	0	0	0.66264	1	44318	44318		0	0	1		+		18077	15658	8685	8723	21024	21024					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9433471560478	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.9	1	104.9	104.4	105.4	0								0	0	0	0.66264	1	44395	44395		0	0	1		+		18078	15658	8685	8723	21025	21025					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9426757693291	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.01	1	105.01	104.51	105.51	0								0	0	0	0.66264	1	44474	44474		0	0	1		+		18079	15658	8685	8723	21026	21026					0.2718542859815898
LIKKLKKITK	10	Unmodified	_LIKKLKKITK_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9415771365166	2	606.941934	1211.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.14	1	105.14	104.64	105.64	0								0	0	0	0.66264	1	44556	44556		0	0	1		+		18080	15658	8685	8723	21027	21027					0.2718542859815898
LIKKYRKKIW	10	Unmodified	_LIKKYRKKIW_					0	0	0		tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	tr|A0A7D6VSL5|A0A7D6VSL5_9CLOTtRNA2-thiocytidinebiosynthesisproteinTtcAOS=ClostridiumintestinaleOX=36845GN=HZF06_17100PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	344.8863098025322	4	344.728867	1374.88636	1.3066	0.00045042	1.5895	0.00054793	2.896	0.00099835	344.98022530355604	41.116	2.2739	41.433	40.919	43.193	0.31683					206	76	4	0	0	0	0.12559	1	17974	17974		0.15932	0	1	9357200			18081	16873	8686	8724	21028	21028					0.21391349203986465
LIKLIPALFV	10	Unmodified	_LIKLIPALFV_					0	0	0			REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2345764040947	3	376.258127	1125.75255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.3	109.8	110.8	0.16133								0	0	0	0.66264	1	47852	47852		0	0	1		+		18082	14513	8687	8725	21029	21029					0.19470690378375366
LILAILHH	8	Unmodified	_LILAILHH_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1347839236259	3	310.535884	928.585822	1.1316	0.00035142	1.4145	0.00043927	2.5462	0.00079068	310.5363387104527	49.86	0.78709	51.251	50.857	51.644	1.3911					36	24	2	0	0	0	2.3239	1	21029	21029		0	0	1	3870100			18083	2252	8688	8726	21030	21030					0.11867262273358392
LILAQECYI	9	Unmodified	_LILAQECYI_					0	0	0			REV__nc|ENSG00000188107|Q5T1H1|EYS	REV__nc|ENSG00000188107|Q5T1H1|EYS	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1889526247978	2	533.286085	1064.55762	1.7045	0.00090901	-0.29877	-0.00015933	1.4058	0.00074968	533.2860456271736	66.562	1.0993	66.562	66.189	67.288	0					102	34	4	0	0	0	0.116	1	28004	28004		9.3474	0	1	9088500	+		18084	14512	8689	8727	21031	21031					0.02792151511107477
LILDDPTDSD	10	Unmodified	_LILDDPTDSD_					0	0	0			REV__ENSG00000183090|ENST00000329798|FREM3	REV__ENSG00000183090|ENST00000329798|FREM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2606078982353	2	552.258776	1102.503	1.6984	0.00093797	-2.5005	-0.0013809	-0.80213	-0.00044298	552.2589526104485	65.525	0.76671	67.434	67.032	67.799	1.9085					47	24	3	0	0	0	0.77604	2	27411	27411;27477		14.838	0	1	2003800	+		18085	11374	8690	8728	21032;21033	21032					-0.04415188826624217
LILDPIFKV	9	Unmodified	_LILDPIFKV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	529.8026000857353	2	529.336436	1056.65832	1.8905	0.0010007	0.92162	0.00048785	2.8121	0.0014886	529.3368187534674	77.131	0.28143	77.131	76.94	77.221	0					14	8	2	0	0	0	0.11611	1	32085	32085		10.074	3.3508	1	558240			18086	3983	8691	8729	21034	21034					0.13225551556274695
LILDPIFKV	9	Unmodified	_LILDPIFKV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3376342654228	2	529.336436	1056.65832	2.328	0.0012323	0.032279	1.7086E-05	2.3603	0.0012494	529.3364550104197	76.569	0.25516	76.891	76.726	76.981	0.32163					12	7	2	0	0	0	0.32838	1	32026	32026		24.021	4.5816	1	549570			18087	3983	8691	8729	21035	21035					0.13225551556274695
LILDPIFKV	9	Unmodified	_LILDPIFKV_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.3416015505791	2	529.336436	1056.65832	2.9415	0.0015571	-0.22504	-0.00011912	2.7165	0.0014379	529.3365633587445	74.965	0.27575	76.746	76.608	76.884	1.7817					16	8	2	0	0	0	0.1109	2	31428	31428;31477		45.7	5.7499	1	1837400			18088	3983	8691	8729	21036;21037	21036					0.13225551556274695
LILDSLLWKPV	11	Unmodified	_LILDSLLWKPV_					0	0	0		ENST00000564961.1_1_16:27214833-27222512:+|nuORF	ENST00000564961.1_1_16:27214833-27222512:+|nuORF	ENST00000564961.1_1_16:27214833-27222512:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	648.9000121951103	2	648.899931	1295.78531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.531	1	95.952	95.452	96.452	0.4212								0	0	0	0.63775	1	40204	40204		1.4819	0	1				18089	7353	8692	8730	21038	21038					0.14924852710601044
LILGKIWDL	9	Unmodified	_LILGKIWDL_					0	0	0		ENST00000471391.1_1_1:51926726-51984921:-|nuORF;ENST00000371727.5_1_1:51924189-51984903:-|nuORF;EPS15|p.E466Rfs*25|1|0.05|ENSG00000085832|chr1:51408212-51408213|-/T|frameshift_variant;ENSG00000085832|ENST00000371733|EPS15	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8362914919853	2	535.83406	1069.65357	3.3118	0.0017746	0.80655	0.00043217	4.1184	0.0022068	535.8347012831819	74.706	0.33537	76.012	75.847	76.182	1.3063					25	10	3	0	0	0	0.053939	1	31364	31364		66.457	0	1	2250900			18090	1065	8693	8731	21039	21039					0.12152667413511153
LILGKIWDL	9	Unmodified	_LILGKIWDL_					0	0	0		ENST00000471391.1_1_1:51926726-51984921:-|nuORF;ENST00000371727.5_1_1:51924189-51984903:-|nuORF;EPS15|p.E466Rfs*25|1|0.05|ENSG00000085832|chr1:51408212-51408213|-/T|frameshift_variant;ENSG00000085832|ENST00000371733|EPS15	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8353149294853	2	535.83406	1069.65357	3.1632	0.0016949	0.67055	0.0003593	3.8337	0.0020542	535.8343963784923	74.202	0.33953	75.998	75.838	76.177	1.7962					25	10	3	0	0	0	0.070055	1	31142	31142		60.074	0	1	2051100			18091	1065	8693	8731	21040	21040					0.12152667413511153
LILGKIWDL	9	Unmodified	_LILGKIWDL_					0	0	0		ENST00000471391.1_1_1:51926726-51984921:-|nuORF;ENST00000371727.5_1_1:51924189-51984903:-|nuORF;EPS15|p.E466Rfs*25|1|0.05|ENSG00000085832|chr1:51408212-51408213|-/T|frameshift_variant;ENSG00000085832|ENST00000371733|EPS15	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	ENST00000471391.1_1_1:51926726-51984921:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	535.83406	1069.65357	2.4353	0.0013049	0.49806	0.00026688	2.9334	0.0015718	535.8348235499844	75.845	0.3157	76.167	75.988	76.303	0.32163	0.032663	0.00011656	NaN	66.457	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	841760			18092	1065	8693	8731							0.12152667413511153
LILGVVAWI	9	Unmodified	_LILGVVAWI_					0	0	0			REV__tr|A0A553STA4|A0A553STA4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04490PE=4SV=1	REV__tr|A0A553STA4|A0A553STA4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04490PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3163635134697	2	492.318046	982.621539	0.80241	0.00039504	-2.3856	-0.0011745	-1.5832	-0.00077943	492.3166101064129	52.929	0.22613	54.329	54.184	54.41	1.4005					11	6	2	0	0	0	0.24585	1	22150	22150		28.173	0.54443	1	1345700	+		18093	15234	8694	8732	21041	21041					0.12953299730361323
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9452392458916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.834	1	10.834	10.334	11.334	0								0	0	0	0.6624	1	4471	4471		0.40072	0	1		+		18094	8998	8695	8733	21042	21042					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9440795779228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.012	1	11.012	10.512	11.512	0								0	0	0	0.6624	1	4547	4547		0.40072	0	1		+		18095	8998	8695	8733	21043	21043					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9437133669853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.588	1	13.588	13.088	14.088	0								0	0	0	0.6624	1	5631	5631		0.40072	0	1		+		18096	8998	8695	8733	21044	21044					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454223513603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.538	1	16.538	16.038	17.038	0								0	0	0	0.6624	1	6865	6865		0.40072	0	1		+		18097	8998	8695	8733	21045	21045					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9434692263603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.901	1	17.901	17.401	18.401	0								0	0	0	0.6624	1	7434	7434		0.40072	0	1		+		18098	8998	8695	8733	21046	21046					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9453613162041	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.946	1	21.946	21.446	22.446	0								0	0	0	0.6624	1	9127	9127		0.40072	0	1		+		18099	8998	8695	8733	21047	21047					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9451171755791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.397	1	26.397	25.897	26.897	0								0	0	0	0.6624	1	11024	11024		0.40072	0	1		+		18100	8998	8695	8733	21048	21048					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9462158083916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.03	1	14.139	13.639	14.639	0.10916								0	0	0	0.6624	1	5821	5821		0.40072	0	1		+		18101	8998	8695	8733	21049	21049					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9457275271416	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.409	1	14.521	14.021	15.021	0.11295								0	0	0	0.6624	1	5978	5978		0.40072	0	1		+		18102	8998	8695	8733	21050	21050					0.22298482406768017
LILIKKWPRR	10	Unmodified	_LILIKKWPRR_					0	0	0			REV__ENSG00000100596|ENST00000216484|SPTLC2	REV__ENSG00000100596|ENST00000216484|SPTLC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9444457888603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.931	1	15.044	14.544	15.544	0.11295								0	0	0	0.6624	1	6197	6197		0.40072	0	1		+		18103	8998	8695	8733	21051	21051					0.22298482406768017
LILILEKRP	9	Unmodified	_LILILEKRP_					0	0	0		ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	ENST00000315762.5_9:67793260-67793749:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	365.2130004763603	3	365.581382	1093.72232	0.57228	0.00020922	3.6002	0.0013162	4.1725	0.0015254	365.9182435851442	23.715	0.37345	23.958	23.73	24.104	0.24251					19	11	2	0	0	0	0.11909	1	9839	9839		2.4985	0.75621	1	228900			18104	5827	8696	8734	21052	21052					0.17920331713230553
LILIVPIAKFV	11	Unmodified	_LILIVPIAKFV_					0	0	0			REV__tr|A0A553SUI5|A0A553SUI5_NIACIABCtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_07035PE=3SV=1	REV__tr|A0A553SUI5|A0A553SUI5_NIACIABCtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_07035PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	409.2804748415947	3	409.280932	1224.82097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.542	1	18.844	18.344	19.344	1.3023								0	0	0	0.63775	1	7286	7286		0.094841	0	1		+		18105	15291	8697	8735	21053	21053					0.2175493495824412
LILLIHCDAH	10	Unmodified	_LILLIHCDAH_					0	0	0		OR2T5|p.V48L|1|0.22|ENSG00000203661|chr1:248488730-248488730|G/C|missense_variant;ENSG00000203661|ENST00000641363|OR2T5;ENSG00000182783|ENST00000641069|OR2T29;ENSG00000196944|ENST00000366473|OR2T4;nc|ENSG00000196944|Q8NH00|OR2T4	OR2T5|p.V48L|1|0.22|ENSG00000203661|chr1:248488730-248488730|G/C|missense_variant	OR2T5|p.V48L|1|0.22|ENSG00000203661|chr1:248488730-248488730|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.3209716677666	2	574.318251	1146.62195	2.0181	0.0011591	2.9272	0.0016811	4.9453	0.0028402	574.3197663003549	91.143	0.34541	91.143	90.936	91.281	0					20	10	3	0	0	0	0.89803	1	38087	38087		0.45834	0.45834	1	1093700			18106	4627	8698	8736	21054	21054					0.05450351387912633
LILLIIPQF	9	Unmodified	_LILLIIPQF_					0	0	0			REV__ENSG00000214338|ENST00000525778|SOGA3	REV__ENSG00000214338|ENST00000525778|SOGA3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1627075076103	2	535.354628	1068.6947	2.7395	0.0014666	-3.2671	-0.0017491	-0.52755	-0.00028243	535.3527289760725	92.566	0.21146	92.734	92.563	92.775	0.16835					10	6	2	0	0	0	0.11812	1	38717	38717		2.0598	0	1	427590	+		18107	11852	8699	8737	21055	21055					0.16310428452970882
LILLITLPLWK	11	Unmodified	_LILLITLPLWK_					0	0	0		tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9480468630791	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.109	1	57.109	56.609	57.609	0								0	0	0	0.63775	1	23831	23831		3.2813	1.6287	1				18108	16596	8700	8738	21056	21056					0.22566893021075884
LILLKAVKKT	10	Unmodified	_LILLKAVKKT_					0	0	0		ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2688781619072	3	376.268915	1125.78492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.704	1	64.033	63.533	64.533	0.32899								0	0	0	0.66254	1	26691	26691		0.15932	0.15932	1				18109	6990	8701	8739	21057	21057					0.22705477781391892
LILLKAVKKT	10	Unmodified	_LILLKAVKKT_					0	0	0		ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2697631716728	3	376.268915	1125.78492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.611	1	63.569	63.069	64.069	1.9571								0	0	0	0.66254	1	25850	25850		0.15932	0.15932	1				18110	6990	8701	8739	21058	21058					0.22705477781391892
LILLKDEILKY	11	Unmodified	_LILLKDEILKY_					0	0	0			REV__tr|A0A7D6ZYS4|A0A7D6ZYS4_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17565PE=4SV=1	REV__tr|A0A7D6ZYS4|A0A7D6ZYS4_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17565PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.2865478396416	3	454.286523	1359.83774	2.9444	0.0013376	-2.9375	-0.0013345	0.0068827	3.1267E-06	454.28584183382605	83.356	1.3341	83.626	83.337	84.671	0.27029					54	42	2	0	0	0	1.0388	1	34873	34873		0.50596	0	1	1237700	+		18111	15783	8702	8740	21059	21059					0.1722139105354472
LILLYFVWYVF	11	Unmodified	_LILLYFVWYVF_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-7|P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	738.4246703982353	2	738.4205	1474.82645	3.5233	0.0026017	0.87982	0.00064968	4.4031	0.0032514	738.4203030295773	94.393	0.28029	95.134	94.919	95.2	0.74124					14	8	2	0	0	0	1.0031	1	39698	39698		3.5965	0	1	980890			18112	7955	8703	8741	21060	21060					0.10802613750070122
LILLYFVWYVF	11	Unmodified	_LILLYFVWYVF_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-7|P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	738.4215576052666	2	738.4205	1474.82645	3.496	0.0025815	1.8302	0.0013514	5.3262	0.003933	738.4227386275018	94.476	0.22177	95.217	95.136	95.358	0.74123					11	6	2	0	0	0	1.0031	1	39770	39770		3.5965	0	1	1030500			18113	7955	8703	8741	21061	21061					0.10802613750070122
LILNLKEYQ	9	Unmodified	_LILNLKEYQ_					0	0	0			REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF	REV__ENST00000519732.5_1_17:67144970-67171813:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3302490115166	2	567.331882	1132.64921	1.8389	0.0010433	-2.826	-0.0016033	-0.98707	-0.00056	567.330149483754	72.639	1.5212	72.964	71.85	73.371	0.32494					110	47	3	0	0	0	0.83753	1	30490	30490		1.8442	0.19162	1	2390700	+		18114	10468	8704	8742	21062	21062					0.08819158199935373
LILVPPNRV	9	Unmodified	_LILVPPNRV_					0	0	0			REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.2244750857353	3	340.890327	1019.64915	0.3651	0.00012446	-3.7617	-0.0012823	-3.3966	-0.0011579	341.22398694118675	31.199	0.26303	33.024	32.865	33.128	1.8246					11	8	2	0	0	0	0.82114	1	13093	13093		2.4985	0.41248	1	773450	+		18115	10393	8705	8743	21063	21063					0.14011202990604943
LILVPVIYFIV	11	Unmodified	_LILVPVIYFIV_					0	0	0			REV__tr|A0A7D7A1R1|A0A7D7A1R1_9CLOTDUF4013domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05345PE=4SV=1	REV__tr|A0A7D7A1R1|A0A7D7A1R1_9CLOTDUF4013domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05345PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2820007205009	3	430.280821	1287.82063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.6	1	101.66	101.16	102.16	0.067009								0	0	0	0.63775	1	42537	42537		0.094841	0	1		+		18116	15833	8706	8744	21064	21064					0.18823515238409527
LILVTINMF	9	Unmodified	_LILVTINMF_					0	0	0		tr|A0A7D6ZS13|A0A7D6ZS13_9CLOTYjbEfamilyputativemetaltransportproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14270PE=3SV=1	tr|A0A7D6ZS13|A0A7D6ZS13_9CLOTYjbEfamilyputativemetaltransportproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14270PE=3SV=1	tr|A0A7D6ZS13|A0A7D6ZS13_9CLOTYjbEfamilyputativemetaltransportproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14270PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0709411501884	3	355.212189	1062.61474	1.7607	0.00062541	-2.0783	-0.00073824	-0.31764	-0.00011283	355.2108356409338	80.776	0.12305	82.472	82.364	82.487	1.6959					5	3	2	0	0	0	0.11938	1	33883	33883		0.26902	0	1	119230			18117	17129	8707	8745	21065	21065					0.08593618787494961
LILWASCE	8	Unmodified	_LILWASCE_					0	0	0			REV__ENST00000368102.5_1_1:159804969-159805389:-|nuORF	REV__ENST00000368102.5_1_1:159804969-159805389:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.7407714724541	2	467.738771	933.462989	2.3791	0.0011128	-0.16136	-7.5472E-05	2.2178	0.0010373	467.73854336272126	51.248	1.5064	51.248	50.532	52.039	0					65	47	2	0	0	0	0.88409	2	21212	21212;21353		6.3541	6.3541	1	622860	+		18118	12634	8708	8746	21066;21067	21066					-0.006403622402217479
LIMELINNV	9	Unmodified	_LIMELINNV_					0	0	0		ENSG00000110955|ENST00000262030|ATP5F1B;ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENSG00000110955|ENST00000262030|ATP5F1B	ENSG00000110955|ENST00000262030|ATP5F1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.8026000857353	2	529.79936	1057.58417	1.8811	0.00099658	1.0908	0.00057793	2.9719	0.0015745	529.8003905412221	77.036	0.28143	77.036	76.94	77.221	0					14	8	2	0	0	0	0.34572	1	32085	32085		23.148	9.6405	1	560830			18119	1722	8709	8747	21068	21068					0.057678404024500196
LIMELINNV	9	Unmodified	_LIMELINNV_					0	0	0		ENSG00000110955|ENST00000262030|ATP5F1B;ENST00000547250.5_1_12:57033951-57037708:-|nuORF	ENSG00000110955|ENST00000262030|ATP5F1B	ENSG00000110955|ENST00000262030|ATP5F1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8013793826103	2	529.79936	1057.58417	2.2966	0.0012167	0.69705	0.0003693	2.9937	0.001586	529.8002016076159	76.672	0.31653	76.988	76.817	77.133	0.31653					13	9	2	0	0	0	0.24063	1	32067	32067		28.487	12.64	1	543900			18120	1722	8709	8747	21069	21069					0.057678404024500196
LIMVMVYFEM	10	Unmodified	_LIMVMVYFEM_					0	0	0		nc|ENSG00000136603|P12757-2|SKIL	nc|ENSG00000136603|P12757-2|SKIL	nc|ENSG00000136603|P12757-2|SKIL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.8216430544853	2	638.312931	1274.61131	3.7787	0.002412	3.0434	0.0019427	6.8221	0.0043547	638.8164971557768	92.946	0.3279	93.817	93.605	93.933	0.87176					23	9	3	0	0	0	0.65574	1	39084	39084		20.454	0	1	1534000			18121	7878	8710	8748	21070	21070					-0.015011353730187693
LINEPLEIL	9	Unmodified	_LINEPLEIL_					0	0	0		tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.7842285037041	2	527.313158	1052.61176	5.7034	0.0030075	-1.0023	-0.0005285	4.7012	0.002479	527.3123715087261	88.417	0.35472	89.473	89.304	89.659	1.0562					14	10	2	0	0	0	0.1006	1	37279	37279		21.747	2.3076	1	609080			18122	16053	8711	8749	21071	21071					0.08756066934324735
LINETLCIIV	10	Unmodified	_LINETLCIIV_					0	0	0			REV__tr|A0A7D7A6C0|A0A7D7A6C0_9CLOTSporulationsigma-Efactor-processingpeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09930PE=3SV=1	REV__tr|A0A7D7A6C0|A0A7D7A6C0_9CLOTSporulationsigma-Efactor-processingpeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09930PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8234130740166	2	565.828117	1129.64168	1.6435	0.00092992	-3.503	-0.0019821	-1.8596	-0.0010522	565.8262427934591	83.561	0.36952	85.199	85.01	85.38	1.6379					16	11	2	0	0	0	0.5476	1	35074	35074		25.399	0	1	2341800	+		18123	15890	8712	8750	21072	21072					0.08204682607993163
LINFVIGIV	9	Unmodified	_LINFVIGIV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3242675662041	2	494.315503	986.616454	2.2371	0.0011058	2.8189	0.0013934	5.056	0.0024992	494.3170397111604	63.852	0.44656	65.259	65.019	65.466	1.4071					38	13	4	0	0	0	0.19075	1	26853	26853		34.102	1.9855	1	8379400			18124	16178	8713	8751	21073	21073					0.12260995867745805
LINKFLIFKVK	11	Unmodified	_LINKFLIFKVK_					0	0	0		tr|A0A7D6VSM9|A0A7D6VSM9_9CLOTSignalpeptidaseIOS=ClostridiumintestinaleOX=36845GN=lepBPE=3SV=1	tr|A0A7D6VSM9|A0A7D6VSM9_9CLOTSignalpeptidaseIOS=ClostridiumintestinaleOX=36845GN=lepBPE=3SV=1	tr|A0A7D6VSM9|A0A7D6VSM9_9CLOTSignalpeptidaseIOS=ClostridiumintestinaleOX=36845GN=lepBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.4771606326103	4	341.477246	1361.87988	0.12265	4.1881E-05	-0.066541	-2.2722E-05	0.056107	1.9159E-05	341.4771281856021	24.829	1.2974	26.07	25.547	26.845	1.241					158	42	6	0	0	0	1.0402	1	10420	10420		0.094841	0	1	32549000			18125	16876	8714	8752	21074	21074					0.21341411252569742
LINMVNANLI	10	Unmodified	_LINMVNANLI_					0	0	0			REV__tr|A0A553SKJ9|A0A553SKJ9_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_18915PE=4SV=1	REV__tr|A0A553SKJ9|A0A553SKJ9_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_18915PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8181640505791	2	557.818084	1113.62162	2.2809	0.0012724	-0.67045	-0.00037399	1.6105	0.00089837	557.817708179325	82.94	0.46892	84.61	84.386	84.855	1.67					27	14	2	0	0	0	0.75645	1	34764	34764		15.847	1.9411	1	3185200	+		18126	14958	8715	8753	21075	21075					0.06934931668070021
LINMVNANLI	10	Unmodified	_LINMVNANLI_					0	0	0			REV__tr|A0A553SKJ9|A0A553SKJ9_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_18915PE=4SV=1	REV__tr|A0A553SKJ9|A0A553SKJ9_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_18915PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	557.818084	1113.62162	2.2809	0.0012724	-0.67045	-0.00037399	1.6105	0.00089837	557.817708179325	82.94	0.46892	84.61	84.386	84.855	1.67	-0.023375	-0.00059166	NaN	15.847	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3185200	+		18127	14958	8715	8753							0.06934931668070021
LINTKETV	8	Unmodified	_LINTKETV_					0	0	0			REV__ENST00000557196.1_1_14:45356671-45356932:-|nuORF	REV__ENST00000557196.1_1_14:45356671-45356932:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1729614138603	2	459.26875	916.522947	2.3621	0.0010848	-0.39652	-0.00018211	1.9656	0.00090274	459.2685641597547	61.785	0.44125	61.785	61.552	61.993	0					33	13	4	0	0	0	2.3239	1	25817	25817		2.0598	0	1	7103800	+		18128	9779	8716	8754	21076	21076					0.06134651694662807
LIPEEFFQF	9	Unmodified	_LIPEEFFQF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.2958251833916	2	585.297507	1168.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.002	1	93.874	93.374	94.374	0.87176								0	0	0	0.26021	1	39149	39149		21.747	10.106	1				18129	1969	8717	8755	21077	21077					0.002914939002266692
LIPEEFFQF	9	Unmodified	_LIPEEFFQF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.2993041872978	2	585.297507	1168.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.123	1	93.995	93.495	94.495	0.87176								0	0	0	0.30487	1	39197	39197		18.135	3.2967	1				18130	1969	8717	8755	21078	21078					0.002914939002266692
LIPEEFFQF	9	Unmodified	_LIPEEFFQF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3005859255791	2	585.297507	1168.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.226	1	94.098	93.598	94.598	0.87176								0	0	0	0.35192	1	39238	39238		13.508	4.9146	1				18131	1969	8717	8755	21079	21079					0.002914939002266692
LIPEEFFQF	9	Unmodified	_LIPEEFFQF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3006469607353	2	585.297507	1168.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.358	1	94.23	93.73	94.73	0.87176								0	0	0	0.35192	1	39291	39291		13.508	5.5977	1				18132	1969	8717	8755	21080	21080					0.002914939002266692
LIPEEFFQF	9	Unmodified	_LIPEEFFQF_					0	0	0		ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	ENSG00000116459|ENST00000369722|ATP5PB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.2995483279228	2	585.297507	1168.58046	3.2228	0.0018863	0.16263	9.5189E-05	3.3854	0.0019815	585.2981974826388	92.614	1.025	93.941	93.666	94.691	1.3269					54	31	3	0	0	0	0.34572	4	39050	38958;38999;39050;39103		23.148	10.908	1	1984400			18133	1969	8717	8755	21081;21082;21083;21084	21083					0.002914939002266692
LIPFGFHIM	9	Unmodified	_LIPFGFHIM_					0	0	0			REV__tr|A0A553SIK9|A0A553SIK9_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15065PE=4SV=1	REV__tr|A0A553SIK9|A0A553SIK9_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7955810427666	2	537.793881	1073.57321	1.8501	0.00099498	1.7159	0.00092281	3.566	0.0019178	537.7949851045826	42.722	0.40581	44.062	43.859	44.265	1.3399					29	12	3	0	0	0	0.24585	1	17916	17916		28.173	1.9051	1	2511000	+		18134	14853	8718	8756	21085	21085					0.03936482818812692
LIPILPDMLR	10	Unmodified	_LIPILPDMLR_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2445556521416	3	394.24226	1179.70495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.629	1	84.629	84.129	85.129	0								0	0	0	0.66166	1	35266	35266		0.69767	0	1				18135	1188	8719	8757	21086	21086					0.12228668115903929
LIPTLRLNN	9	Unmodified	_LIPTLRLNN_					0	0	0		ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3256103396416	2	527.324391	1052.63423	3.3545	0.0017689	-1.4885	-0.00078493	1.866	0.000984	527.3236378166768	96.528	0.12447	96.835	96.758	96.882	0.3062					5	3	2	0	0	0	0.24063	1	40615	40615		28.487	0	1	1482800			18136	6065	8720	8758	21087	21087					0.11001711122594315
LIPTLRLNN	9	Unmodified	_LIPTLRLNN_					0	0	0		ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	527.324391	1052.63423	2.8808	0.0015191	-0.49065	-0.00025873	2.3902	0.0012604	527.3239655080154	96.908	0.096222	97.013	96.941	97.038	0.105	0.073717	0.0011128	NaN	28.487	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534480			18137	6065	8720	8758							0.11001711122594315
LIPTLRLNN	9	Unmodified	_LIPTLRLNN_					0	0	0		ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	ENST00000367521.5_1_1:183907497-183907605:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.324391	1052.63423	3.8451	0.0020276	-3.1217	-0.0016462	0.72334	0.00038143	527.8240049954419	96.685	0.092773	96.97	96.892	96.985	0.28442	0.0307	-0.001662	NaN	28.487	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	601360			18138	6065	8720	8758							0.11001711122594315
LIQFPDVIV	9	Unmodified	_LIQFPDVIV_					0	0	0			REV__ENSG00000144034|ENST00000272424|TPRKB	REV__ENSG00000144034|ENST00000272424|TPRKB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3133422732353	2	522.310418	1042.60628	3.1983	0.0016705	2.7723	0.001448	5.9705	0.0031185	522.311855849741	96.149	0.17733	96.551	96.461	96.638	0.40208					9	5	2	0	0	0	0.13873	1	40458	40458		39.957	1.9833	1	1867500	+		18139	10233	8721	8759	21088	21088					0.08668388142518779
LIQGGNRVD	9	Unmodified	_LIQGGNRVD_					0	0	0			REV__ENST00000397102.5_1_3:10355120-10362775:-|nuORF	REV__ENST00000397102.5_1_3:10355120-10362775:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2680847048759	2	486.267073	970.519593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.695	1	82.391	81.891	82.891	1.6959								0	0	0	0.41514	1	33854	33854		7.2892	0.93513	1		+		18140	10532	8722	8760	21089	21089					0.03315401640657001
LIQKISIKRYK	11	Unmodified	_LIQKISIKRYK_					0	0	0			REV__tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	REV__tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	347.5474120974541	4	348.228965	1388.88676	-1.1092	-0.00038624	3.2707	0.0011389	2.1615	0.0007527	348.48069749727506	45.106	1.5987	45.106	44.472	46.07	0					83	50	3	0	0	0	0.14606	1	19178	19178		0.50596	0	1	4053300	+		18141	15611	8723	8761	21090	21090					0.20786724133176904
LIQKISIKRYK	11	Unmodified	_LIQKISIKRYK_					0	0	0			REV__tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	REV__tr|A0A7D6W3B3|A0A7D6W3B3_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09535PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	347.5474120974541	4	348.228965	1388.88676	-1.0707	-0.00037284	2.5268	0.0008799	1.4561	0.00050705	348.48135733603664	46.27	1.2049	46.27	45.753	46.958	0					76	38	3	0	0	0	0.14606	1	19178	19178		0.50596	0	1	1449400	+		18142	15611	8723	8761	21091	21091					0.20786724133176904
LIQNADYD	8	Unmodified	_LIQNADYD_					0	0	0		tr|A0A7D6VU71|A0A7D6VU71_9CLOTATP-dependentClpproteaseATP-bindingsubunitClpXOS=ClostridiumintestinaleOX=36845GN=clpXPE=3SV=1	tr|A0A7D6VU71|A0A7D6VU71_9CLOTATP-dependentClpproteaseATP-bindingsubunitClpXOS=ClostridiumintestinaleOX=36845GN=clpXPE=3SV=1	tr|A0A7D6VU71|A0A7D6VU71_9CLOTATP-dependentClpproteaseATP-bindingsubunitClpXOS=ClostridiumintestinaleOX=36845GN=clpXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.2265197634697	2	476.224539	950.434526	1.5823	0.00075351	-1.6479	-0.00078476	-0.065621	-3.125E-05	476.22409154692497	55.191	0.34104	56.6	56.422	56.763	1.4099					26	11	3	0	0	0	0.87276	2	23094	23094;23145		13.508	0	1	18132000			18143	16942	8724	8762	21092;21093	21092					-0.04267388615824075
LIQQRKGQIVP	11	Unmodified	_LIQQRKGQIVP_					0	0	0		ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3	ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.3926269412041	2	640.395879	1278.7772	1.5573	0.00099727	-4.414	-0.0028267	-2.8568	-0.0018295	640.3924012248599	39.922	0.18483	41.784	41.677	41.862	1.8624					12	5	3	0	0	0	1.0366	1	16723	16723		1.1933	0.12188	1	1062800			18144	3722	8725	8763	21094	21094					0.14896718513841734
LIQSEFESL	9	Unmodified	_LIQSEFESL_					0	0	0			REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1928588747978	2	533.276772	1064.53899	3.4609	0.0018456	0.41911	0.0002235	3.88	0.0020691	533.2769691154012	82.566	0.3811	83.779	83.602	83.983	1.2125					17	11	2	0	0	0	0.11333	1	34691	34691		4.756	0	1	832910	+		18145	8451	8726	8764	21095	21095					0.009303131409069465
LIQSVLAQV	9	Unmodified	_LIQSVLAQV_					0	0	0		ENST00000495343.5_1_21:44151932-44153535:+|nuORF;ENST00000467162.5_1_21:44106337-44153535:+|nuORF;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-6|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	485.7269470095634	2	485.800217	969.585882	1.3472	0.00065448	1.6081	0.00078122	2.9553	0.0014357	485.80252509029316	55.397	0.26373	56.807	56.616	56.88	1.4099					16	8	2	0	0	0	0.098208	1	23138	23138		18.146	0	1	713330			18146	3544	8727	8765	21096	21096					0.09987217482705546
LIQSVLAQV	9	Unmodified	_LIQSVLAQV_					0	0	0		ENST00000495343.5_1_21:44151932-44153535:+|nuORF;ENST00000467162.5_1_21:44106337-44153535:+|nuORF;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-6|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	485.800217	969.585882	0.81365	0.00039527	1.3801	0.00067047	2.1938	0.0010657	485.80253923411345	54.903	0.26477	56.872	56.695	56.959	1.9684	0.032276	-0.00011922	NaN	13.042	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	805200			18147	3544	8727	8765							0.09987217482705546
LIRGYYRKLHL	11	Unmodified	_LIRGYYRKLHL_					0	0	0			REV__ENSG00000171855|ENST00000380232|IFNB1	REV__ENSG00000171855|ENST00000380232|IFNB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	477.7629882693291	3	477.957623	1430.85104	3.3869	0.0016188	3.0864	0.0014752	6.4733	0.003094	477.95873543418617	87.152	1.4366	87.396	87.264	88.7	0.24387					79	47	2	0	0	0	0.14606	1	36585	36585		0.50596	0.41111	1	3658100	+		18148	11047	8728	8766	21097	21097					0.1528468667618199
LIRGYYRKLHL	11	Unmodified	_LIRGYYRKLHL_					0	0	0			REV__ENSG00000171855|ENST00000380232|IFNB1	REV__ENSG00000171855|ENST00000380232|IFNB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	477.957623	1430.85104	3.9891	0.0019066	2.2394	0.0010703	6.2286	0.002977	477.95809099091235	86.013	0.49659	87.56	87.512	88.008	1.547	0.03508	-0.0010379	NaN	0.50596	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3275100	+		18149	11047	8728	8766							0.1528468667618199
LIRKEEQVH	9	Unmodified	_LIRKEEQVH_					0	0	0			REV__nc|ENSG00000174938|Q6UXD5-4|SEZ6L2	REV__nc|ENSG00000174938|Q6UXD5-4|SEZ6L2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1527892947197	3	384.555895	1150.64586	-1.1	-0.00042301	0.1538	5.9144E-05	-0.94619	-0.00036386	384.5562274713737	10.566	0.21542	11.236	11.093	11.309	0.66934					12	7	2	0	0	0	0.11891	1	4370	4370		1.1933	0.735	1	479740	+		18150	11137	8729	8767	21098	21098					0.0765590814596635
LIRKYHLPR	9	Unmodified	_LIRKYHLPR_					0	0	0			REV__OR52I1|p.K132R|1|0.33|ENSG00000232268|chr11:4594433-4594433|A/G|missense_variant	REV__OR52I1|p.K132R|1|0.33|ENSG00000232268|chr11:4594433-4594433|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2512084841728	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.987	1	81.987	81.487	82.487	0								0	0	0	0.42693	1	34153	34153		2.7352	0.30041	1		+		18151	14590	8730	8768	21099	21099					0.14536787896099668
LIRKYHLPR	9	Unmodified	_LIRKYHLPR_					0	0	0			REV__OR52I1|p.K132R|1|0.33|ENSG00000232268|chr11:4594433-4594433|A/G|missense_variant	REV__OR52I1|p.K132R|1|0.33|ENSG00000232268|chr11:4594433-4594433|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2507507205009	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.321	1	73.646	73.146	74.146	0.32494								0	0	0	0.42693	1	30675	30675		2.4985	0.75621	1		+		18152	14590	8730	8768	21100	21100					0.14536787896099668
LIRLLQIQL	9	Unmodified	_LIRLLQIQL_					0	0	0			REV__ENSG00000081014|ENST00000261842|AP4E1	REV__ENSG00000081014|ENST00000261842|AP4E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3768798708916	2	555.373884	1108.73321	2.2753	0.0012636	2.1992	0.0012214	4.4744	0.002485	555.3731997506197	85.139	0.24718	86.298	86.086	86.333	1.159					13	7	3	0	0	0	0.076627	1	35704	35704		57.471	5.203	1	3518200	+		18153	8811	8731	8769	21101	21101					0.1831973408752674
LIRLLQIQL	9	Unmodified	_LIRLLQIQL_					0	0	0			REV__ENSG00000081014|ENST00000261842|AP4E1	REV__ENSG00000081014|ENST00000261842|AP4E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3756591677666	2	555.373884	1108.73321	2.4744	0.0013742	1.2301	0.00068314	3.7044	0.0020573	555.3746105878379	84.607	0.36967	86.203	85.972	86.341	1.5962					31	11	3	0	0	0	0.076627	1	35443	35443		57.471	5.203	1	3643800	+		18154	8811	8731	8769	21102	21102					0.1831973408752674
LIRLRLSKLR	10	Unmodified	_LIRLRLSKLR_					0	0	0		OCA2|p.H163L|1|0.08|ENSG00000104044|chr15:28027898-28027898|T/A|missense_variant	OCA2|p.H163L|1|0.08|ENSG00000104044|chr15:28027898-28027898|T/A|missense_variant	OCA2|p.H163L|1|0.08|ENSG00000104044|chr15:28027898-28027898|T/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4372436404228	2	634.437881	1266.86121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.452	1	92.452	91.952	92.952	0								0	0	0	0.66237	1	38634	38634		0.45834	0	1				18155	8042	8732	8770	21103	21103					0.23845294401371575
LIRWCHLL	8	Unmodified	_LIRWCHLL_					0	0	0			REV__ENST00000565070.5_1_16:27237776-27268891:-|nuORF	REV__ENST00000565070.5_1_16:27237776-27268891:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3064453005791	2	527.304947	1052.59534	1.8244	0.00096204	-1.0602	-0.00055905	0.76424	0.00040299	527.3057192467344	41.965	0.97211	43.886	43.537	44.509	1.9211					57	30	3	0	0	0	0.88504	1	17625	17625		5.7604	0.52976	1	2926000	+		18156	13929	8733	8771	21104	21104					0.07114707287246347
LISAQFLTL	9	Unmodified	_LISAQFLTL_					0	0	0			REV__ENST00000296603.4_1_5:36141239-36142655:-|nuORF	REV__ENST00000296603.4_1_5:36141239-36142655:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3058349490166	2	503.302593	1004.59063	2.6367	0.0013271	1.0677	0.00053738	3.7044	0.0018644	503.303058489459	59.604	0.51395	61.573	61.405	61.918	1.969					22	16	2	0	0	0	0.20671	1	25059	25059		32.305	0	1	1893300	+		18157	12295	8734	8772	21105	21105					0.08852101625473097
LISCWSGDRTF	11	Unmodified	_LISCWSGDRTF_					0	0	0			REV__ENSG00000105497|ENST00000262259|ZNF175	REV__ENSG00000105497|ENST00000262259|ZNF175	MSMS	GG20161007_CRH_Patient100_W632_02	4	642.8069335818291	2	642.805705	1283.59686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.563	1	64.508	64.008	65.008	1.9444								0	0	0	0.63775	1	26253	26253		6.2058	0	1		+		18158	9178	8735	8773	21106	21106					-0.03359748205343749
LISELKVLS	9	Unmodified	_LISELKVLS_					0	0	0		KIT|p.M638I|1|0.74|ENSG00000157404|chr4:54728045-54728045|G/A|missense_variant	KIT|p.M638I|1|0.74|ENSG00000157404|chr4:54728045-54728045|G/A|missense_variant	KIT|p.M638I|1|0.74|ENSG00000157404|chr4:54728045-54728045|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3163329958916	2	501.3157	1000.61685	1.7802	0.00089246	-2.7137	-0.0013604	-0.93348	-0.00046797	501.3139040427703	43.397	0.2309	45.341	45.196	45.427	1.9438					11	7	2	0	0	0	0.10993	1	18210	18210		46.021	3.9264	1	1224300			18159	7668	8736	8774	21107	21107					0.11656370796947613
LISGATLLLV	10	Unmodified	_LISGATLLLV_					0	0	0		ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3271667361259	2	500.326068	998.637583	4.0142	0.0020084	3.4108	0.0017065	7.425	0.0037149	500.3273310985931	95.662	0.27738	96.083	95.943	96.22	0.4212					15	8	2	0	0	0	0.09859	2	40251	40251;40302		64.236	2.8788	1	3798400			18160	6029	8737	8775	21108;21109	21108					0.1382096117662286
LISGATLLLV	10	Unmodified	_LISGATLLLV_					0	0	0		ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3281738162041	2	500.326068	998.637583	3.039	0.0015205	4.2884	0.0021456	7.3274	0.0036661	500.3275471528412	95.353	0.26135	95.755	95.641	95.903	0.40208					20	9	3	0	0	0	0.09859	1	40115	40115		64.236	2.8788	1	3501400			18161	6029	8737	8775	21110	21110					0.1382096117662286
LISGATLLLV	10	Unmodified	_LISGATLLLV_					0	0	0		ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	ENST00000360409.7_1_2:206547732-206547855:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	500.326068	998.637583	3.3018	0.001652	0.76925	0.00038488	4.071	0.0020368	500.32577185058454	96.098	0.16025	96.203	96.125	96.286	0.105	0.0062076	-0.0015584	NaN	64.236	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1218100			18162	6029	8737	8775							0.1382096117662286
LISGQRPVN	9	Unmodified	_LISGQRPVN_					0	0	0		ENSG00000248329|ENST00000507152|APELA	ENSG00000248329|ENST00000507152|APELA	ENSG00000248329|ENST00000507152|APELA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2853576540947	2	492.285266	982.555979	1.5499	0.000763	-0.30422	-0.00014976	1.2457	0.00061323	492.28486021892417	77.611	0.43206	77.611	77.409	77.841	0					30	13	3	0	0	0	0.83753	1	32290	32290		1.8442	0.19162	1	2971900			18163	5369	8738	8776	21111	21111					0.06400278537364557
LISGQRPVN	9	Unmodified	_LISGQRPVN_					0	0	0		ENSG00000248329|ENST00000507152|APELA	ENSG00000248329|ENST00000507152|APELA	ENSG00000248329|ENST00000507152|APELA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	492.285266	982.555979	2.5892	0.0012746	0.27234	0.00013407	2.8616	0.0014087	492.2850475764331	76.549	0.78368	77.843	77.575	78.359	1.2938	0.10871	0.00087018	NaN	1.8442	42	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2886600			18164	5369	8738	8776							0.06400278537364557
LISGVKSLSK	10	Unmodified	_LISGVKSLSK_					0	0	0		ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3262817263603	2	516.326599	1030.63865	1.6482	0.00085102	-1.637	-0.00084524	0.01119	5.7776E-06	516.3257045731144	83.958	0.32086	85.146	84.987	85.307	1.1879					25	10	3	0	0	0	0.51515	1	35240	35240		26.884	11.036	1	8939700			18165	1977	8739	8777	21112	21112					0.12455175545505881
LISGVKSLSK	10	Unmodified	_LISGVKSLSK_					0	0	0		ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3260375857353	2	516.326599	1030.63865	1.8293	0.00094452	-2.2613	-0.0011676	-0.43205	-0.00022308	516.3252283064769	83.483	0.33705	85.121	85.01	85.347	1.6379					18	10	2	0	0	0	0.77604	1	35059	35059		14.838	3.198	1	5656800			18166	1977	8739	8777	21113	21113					0.12455175545505881
LISGVKSLSK	10	Unmodified	_LISGVKSLSK_					0	0	0		ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	ENSG00000116668|ENST00000367500|SWT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	516.326599	1030.63865	2.746	0.0014178	-0.065004	-3.3563E-05	2.681	0.0013842	516.326567907808	85.276	0.31738	85.276	85.1	85.417	0	0.12454	0.00070122	NaN	26.884	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2165900			18167	1977	8739	8777							0.12455175545505881
LISGYFILVV	10	Unmodified	_LISGYFILVV_					0	0	0			REV__ENSG00000197403|ENST00000641846|OR6N1	REV__ENSG00000197403|ENST00000641846|OR6N1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3432494997978	2	562.341718	1122.66888	1.1505	0.00064699	2.5057	0.0014091	3.6562	0.002056	562.3427767084524	70.133	1.1677	70.133	69.675	70.842	0					57	37	2	0	0	0	0.89803	1	29188	29188		1.6526	0.85899	1	1274100	+		18168	11672	8740	8778	21114	21114					0.11245534210706865
LISHEKLLL	9	Unmodified	_LISHEKLLL_					0	0	0		ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	356.2550231814384	3	355.893737	1064.65938	-0.71673	-0.00025508	1.8564	0.00066069	1.1397	0.00040561	356.22958650126657	63.03	0.40893	63.03	62.895	63.304	0					16	12	2	0	0	0	0.11891	1	26389	26389		0.26902	0.033176	1	577840			18169	5001	8741	8779	21115	21115					0.12963765925201187
LISMLKVS	8	Unmodified	_LISMLKVS_					0	0	0			REV__nc|ENSG00000185220|Q6P3X8-2|PGBD2	REV__nc|ENSG00000185220|Q6P3X8-2|PGBD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1198913455009	2	445.772614	889.530675	2.7752	0.0012371	-4.061	-0.0018103	-1.2858	-0.00057316	445.77013717794375	71.106	0.78738	72.447	72.086	72.873	1.3415					33	25	2	0	0	0	2.3239	1	29787	29787		10.183	0	1	1314700	+		18170	11455	8742	8780	21116	21116					0.08149087690583201
LISSHRRRV	9	Unmodified	_LISSHRRRV_					0	0	0			REV__nc|ENSG00000137812|Q8NG31-3|KNL1	REV__nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3445312380791	2	562.343981	1122.67341	1.8758	0.0010548	-0.053188	-2.991E-05	1.8226	0.0010249	562.3436917925029	72.52	2.0309	72.845	71.85	73.881	0.32494					136	64	3	0	0	0	0.75267	1	30674	30674		5.2307	5.2307	1	7864900	+		18171	10030	8743	8781	21117	21117					0.11697856196838075
LISVAWTLSV	10	Unmodified	_LISVAWTLSV_					0	0	0		ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8226196169853	2	544.82115	1087.62775	2.1044	0.0011465	1.2655	0.00068948	3.3699	0.001836	544.8214998151788	61.137	0.2809	61.467	61.235	61.516	0.32974					14	8	2	0	0	0	0.846	1	25549	25549		7.2892	0	1	495700			18172	4711	8744	8782	21118	21118					0.08743773171227076
LISVAWTLSV	10	Unmodified	_LISVAWTLSV_					0	0	0		ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	ENSG00000184845|ENST00000393752|DRD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	544.82115	1087.62775	1.9524	0.0010637	-1.2946	-0.00070531	0.65785	0.00035841	544.8210804696629	61.683	0.28468	61.683	61.487	61.772	0	0.108	-0.0014395	NaN	7.2892	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384310			18173	4711	8744	8782							0.08743773171227076
LITAIMLLL	9	Unmodified	_LITAIMLLL_					0	0	0			REV__tr|A0A553SGJ4|A0A553SGJ4_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10975PE=4SV=1	REV__tr|A0A553SGJ4|A0A553SGJ4_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1000.678515613079	1	1000.6475	999.640225	4.0297	0.0040323	1.9808	0.0019821	6.0105	0.0060144	1000.6493813163626	99.798	0.073357	99.996	99.945	100.02	0.19767					7	3	3	0	0	0	0.028763	1	41999	41999		89.427	4.0701	1	14050000	+		18174	14751	8745	8783	21119	21119					0.1403909330992974
LITAIMLLL	9	Oxidation (M)	_LITAIM(Oxidation (M))LLL_		LITAIM(1)LLL		LITAIM(82)LLL	0	0	1			REV__tr|A0A553SGJ4|A0A553SGJ4_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10975PE=4SV=1	REV__tr|A0A553SGJ4|A0A553SGJ4_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_10975PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	508.8244201540947	2	508.824846	1015.63514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.279	1	98.536	98.036	99.036	0.25636								0	0	0	0.02596	1	41355	41355		81.864	7.4677	1		+		18175	14751	8745	8784	21120	21120		123			0.1279478944730954
LITAKKIKTK	10	Unmodified	_LITAKKIKTK_					0	0	0			REV__tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	REV__tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1143.789843738079	1	1143.78236	1142.77508	1.353	0.0015476	4.1024	0.0046923	5.4554	0.0062398	1144.7863937702475	104.28	0.063629	104.28	104.23	104.29	0					14	5	3	0	0	0	0.89803	1	43964	43964		0.35063	0.35063	1	29326000	+		18176	15570	8746	8785	21121	21121					0.2094028977603557
LITAKKIKTK	10	Unmodified	_LITAKKIKTK_					0	0	0			REV__tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	REV__tr|A0A7D6VZL8|A0A7D6VZL8_9CLOTPilusassemblyproteinPilMOS=ClostridiumintestinaleOX=36845GN=pilMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1143.794726550579	1	1143.78236	1142.77508	2.7741	0.0031729	2.6616	0.0030443	5.4357	0.0062172	1143.7875084938894	104.19	0.080505	104.35	104.3	104.38	0.16055					19	7	3	0	0	0	0.89803	1	44083	44083		0.35063	0.35063	1	158090000	+		18177	15570	8746	8785	21122	21122					0.2094028977603557
LITAVIVIL	9	Unmodified	_LITAVIVIL_					0	0	0			REV__tr|A0A7D6VPP1|A0A7D6VPP1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23675PE=4SV=1	REV__tr|A0A7D6VPP1|A0A7D6VPP1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23675PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.6604492068291	1	954.659781	953.652505	3.4663	0.0033092	-2.1993	-0.0020996	1.267	0.0012095	954.6573635244263	98.116	0.25805	98.372	98.276	98.534	0.25636					18	8	3	0	0	0	0.028763	1	41273	41273		89.427	0	1	317730000	+		18178	15359	8747	8786	21123	21123					0.17382453044604063
LITDIIQLS	9	Unmodified	_LITDIIQLS_					0	0	0		nc|ENSG00000117600|Q7Z2D5-2|PLPPR4;nc|ENSG00000117600|Q7Z2D5-3|PLPPR4;ENSG00000117600|ENST00000370185|PLPPR4;nc|ENSG00000117600|Q7Z2D5|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	nc|ENSG00000117600|Q7Z2D5-2|PLPPR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3087646365166	2	508.305332	1014.59611	6.2805	0.0031924	0.098719	5.0179E-05	6.3792	0.0032426	508.3051430874027	88.748	0.35569	89.804	89.626	89.982	1.0562					17	10	2	0	0	0	0.042029	1	37406	37406		74.423	16.951	1	1340400			18179	2018	8748	8787	21124	21124					0.08939780417290422
LITDLLVRS	9	Unmodified	_LITDLLVRS_					0	0	0			REV__nc|ENSG00000160207|O75031-2|HSF2BP	REV__nc|ENSG00000160207|O75031-2|HSF2BP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.3226196169853	2	515.318774	1028.623	2.182	0.0011244	0.67831	0.00034955	2.8604	0.001474	515.3193043282695	64.159	0.2887	64.159	64.013	64.302	0					14	8	2	0	0	0	0.44062	1	26735	26735		18.373	0	1	1029800	+		18180	10592	8749	8788	21125	21125					0.1098288902846889
LITDRSLVI	9	Unmodified	_LITDRSLVI_					0	0	0			REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.3206664919853	2	515.318774	1028.623	2.0577	0.0010604	-0.56607	-0.00029171	1.4916	0.00076865	515.3193006616364	63.659	0.2955	63.988	63.82	64.115	0.32899					14	9	2	0	0	0	0.40005	1	26706	26706		20.415	2.0414	1	1377600	+		18181	15703	8750	8789	21126	21126					0.1098288902846889
LITDRSLVI	9	Unmodified	_LITDRSLVI_					0	0	0			REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	515.318774	1028.623	2.182	0.0011244	0.67831	0.00034955	2.8604	0.001474	515.3193043282695	64.159	0.2887	64.159	64.013	64.302	0	0.085275	0.00031729	NaN	20.415	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029800	+		18182	15703	8750	8789							0.1098288902846889
LITDRSLVI	9	Unmodified	_LITDRSLVI_					0	0	0			REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	REV__tr|A0A7D6ZSA1|A0A7D6ZSA1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15000PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	515.318774	1028.623	2.0577	0.0010604	-0.56607	-0.00029171	1.4916	0.00076865	515.3193006616364	63.659	0.2955	63.988	63.82	64.115	0.32899	-0.085275	-0.00096521	NaN	20.415	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1377600	+		18183	15703	8750	8789							0.1098288902846889
LITHGFGGPA	10	Unmodified	_LITHGFGGPA_					0	0	0		ENSG00000116819|ENST00000373235|TFAP2E	ENSG00000116819|ENST00000373235|TFAP2E	ENSG00000116819|ENST00000373235|TFAP2E	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2592651247978	2	485.261259	968.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.77	1	44.094	43.594	44.594	0.32389								0	0	0	0.66008	1	18374	18374		4.3292	1.44	1				18184	1988	8751	8790	21127	21127					0.022452046173384588
LITIHWRLVKF	11	Unmodified	_LITIHWRLVKF_					0	0	0		ENST00000342449.7_2_21:40571486-40571522:-|nuORF	ENST00000342449.7_2_21:40571486-40571522:-|nuORF	ENST00000342449.7_2_21:40571486-40571522:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1992675662041	3	475.962485	1424.86563	1.2909	0.0006144	-0.52432	-0.00024956	0.76654	0.00036484	475.9616187097933	52.496	0.41583	54.468	54.32	54.736	1.9722					19	12	3	0	0	0	0.14606	1	21952	21952		0	0	1	1390300			18185	5941	8752	8791	21128	21128					0.17018758824269753
LITKSLLLIIL	11	Unmodified	_LITKSLLLIIL_					0	0	0			REV__ENST00000423082.1_1_1:111550392-111550686:-|nuORF	REV__ENST00000423082.1_1_1:111550392-111550686:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4376708865166	2	620.43615	1238.85775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.43	1	108.43	107.93	108.93	0								0	0	0	0.63775	1	46723	46723		0	0	1		+		18186	12983	8753	8792	21129	21129					0.2478718678421501
LITSLGRHRK	10	Unmodified	_LITSLGRHRK_					0	0	0		ENSG00000185899|ENST00000332690|TAS2R60	ENSG00000185899|ENST00000332690|TAS2R60	ENSG00000185899|ENST00000332690|TAS2R60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8694335818291	2	590.867289	1179.72002	4.6529	0.0027492	-1.3997	-0.00082704	3.2532	0.0019222	590.8663164590114	89.378	0.56226	90.782	90.456	91.019	1.4045					62	17	4	0	0	0	0.89588	1	37684	37684		1.6526	0	1	22115000			18187	4770	8754	8793	21130	21130					0.13735296028107769
LITTTLVAL	9	Unmodified	_LITTTLVAL_					0	0	0		ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	472.2765991091728	2	472.804968	943.595384	3.6597	0.0017303	0.27709	0.00013101	3.9368	0.0018613	472.8049582898279	73.469	0.2499	74.787	74.685	74.935	1.318					13	7	2	0	0	0	0.11645	1	30799	30799		4.756	0	1	653330			18188	4085	8755	8794	21131	21131					0.12132985768243998
LIVATGTTVC	10	Unmodified	_LIVATGTTVC_					0	0	0		CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.2707702517509	2	489.270435	976.526318	0.68093	0.00033316	0.057798	2.8279E-05	0.73873	0.00036144	489.2706227494615	19.533	0.40391	19.533	19.356	19.76	0					40	12	5	0	0	0	0.22411	2	8082	8082;8132		46.021	2.1627	1	13478000		+	18189	328	8756	8795	21132;21133	21132					0.03711578477009425
LIVATGTTVC	10	Unmodified	_LIVATGTTVC_					0	0	0		CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.2708923220634	2	489.270435	976.526318	1.2507	0.00061191	-0.40022	-0.00019582	0.85043	0.00041609	489.2701862771852	19.151	0.3613	19.345	19.201	19.562	0.19342					23	11	3	0	0	0	0.22411	1	7958	7958		46.021	2.1627	1	2294800		+	18190	328	8756	8795	21134	21134					0.03711578477009425
LIVATGTTVC	10	Unmodified	_LIVATGTTVC_					0	0	0		CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	CON__ENSEMBL:ENSBTAP00000023055	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2701904177666	2	489.270435	976.526318	0.38757	0.00018963	0.16292	7.9713E-05	0.5505	0.00026934	489.2702350915921	18.028	0.26702	19.476	19.346	19.613	1.448					12	8	2	0	0	0	0.44465	1	7505	7505		30.637	1.555	1	867650		+	18191	328	8756	8795	21135	21135					0.03711578477009425
LIVDNKVVI	9	Unmodified	_LIVDNKVVI_					0	0	0			REV__nc|ENSG00000205277|Q9UKN1|MUC12	REV__nc|ENSG00000205277|Q9UKN1|MUC12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8261901736259	2	506.823692	1011.63283	2.6545	0.0013454	0.43756	0.00022177	3.092	0.0015671	506.8240505757271	44.257	0.25657	45.611	45.47	45.727	1.3536					19	7	3	0	0	0	0.39674	1	18590	18590		27.629	1.3607	1	2507800	+		18192	14529	8757	8796	21136	21136					0.1274807703384795
LIVEGIQLKQS	11	Unmodified	_LIVEGIQLKQS_					0	0	0			REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.3697997927666	2	614.368995	1226.72344	1.8913	0.001162	-0.81568	-0.00050113	1.0756	0.00066083	614.3685251260789	69.978	0.40913	69.978	69.77	70.179	0					41	12	4	0	0	0	0.37492	1	29141	29141		27.629	10.687	1	12096000	+		18193	15012	8758	8797	21137	21137					0.11914501291471424
LIVEGIQLKQS	11	Unmodified	_LIVEGIQLKQS_					0	0	0			REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3703491091728	2	614.368995	1226.72344	1.2428	0.00076355	0.59244	0.00036398	1.8353	0.0011275	614.3694053212108	69.544	0.40899	69.866	69.657	70.066	0.32224					44	12	4	0	0	0	0.54522	1	29133	29133		22.736	1.1993	1	12999000	+		18194	15012	8758	8797	21138	21138					0.11914501291471424
LIVEGIQLKQS	11	Unmodified	_LIVEGIQLKQS_					0	0	0			REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.3708373904228	2	614.368995	1226.72344	2.0449	0.0012563	-0.25455	-0.00015639	1.7903	0.0010999	614.3689217839554	68.493	0.45816	69.86	69.634	70.092	1.3668					47	14	4	0	0	0	0.54522	3	28702	28702;28744;28796		22.736	4.5899	1	26328000	+		18195	15012	8758	8797	21139;21140;21141	21139					0.11914501291471424
LIVEGIQLKQS	11	Unmodified	_LIVEGIQLKQS_					0	0	0			REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	REV__tr|A0A553SMC3|A0A553SMC3_NIACIHemeresponseregulatorHssROS=NialliacirculansOX=1397GN=CEQ21_22315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3694946169853	2	614.368995	1226.72344	2.1823	0.0013408	-0.39674	-0.00024375	1.7856	0.001097	614.3687494008938	68.003	0.46201	69.873	69.643	70.105	1.87					51	14	5	0	0	0	0.74096	1	28474	28474		17.113	1.8644	1	22270000	+		18196	15012	8758	8797	21142	21142					0.11914501291471424
LIVENDKFGVV	11	Unmodified	_LIVENDKFGVV_					0	0	0			REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	616.8475829958916	2	616.847896	1231.68124	1.2426	0.00076651	-1.6151	-0.00099627	-0.37248	-0.00022977	616.8468510055543	69.544	0.37686	69.866	69.689	70.066	0.32224					33	11	4	0	0	0	0.77451	1	29168	29168		16.149	2.5342	1	3650500	+		18197	15679	8759	8798	21143	21143					0.07466525883069153
LIVERPLVQG	10	Unmodified	_LIVERPLVQG_					0	0	0			REV__tr|A0A553SUD2|A0A553SUD2_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_06755PE=4SV=1	REV__tr|A0A553SUD2|A0A553SUD2_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_06755PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3444091677666	2	562.345323	1122.67609	2.3852	0.0013413	-2.6967	-0.0015165	-0.31153	-0.00017519	562.3437694890226	73.779	1.3866	74.104	73.881	75.267	0.32494					94	43	3	0	0	0	0.89803	1	30921	30921		1.6526	0	1	2032100	+		18198	15288	8760	8799	21144	21144					0.11966266811100468
LIVFCPEKV	9	Unmodified	_LIVFCPEKV_					0	0	0			REV__chr13:43059012-43068930|141|10.11|0.21|5.56|+|2|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|15	REV__chr13:43059012-43068930|141|10.11|0.21|5.56|+|2|TE_info:L1PB1,L1PB1_dup10508,L1,LINE,donor,-,43056899,43059012|None,DNAJC15|15	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	524.3066284060478	2	524.298996	1046.58344	2.3598	0.0012372	1.5216	0.00079776	3.8814	0.002035	524.3005122807083	61.248	0.22047	61.248	61.172	61.393	0					12	6	3	0	0	0	0.071872	1	25522	25522		24.021	10.513	1	1574400	+		18199	8255	8761	8800	21145	21145					0.06201045753391554
LIVGELPKLG	10	Unmodified	_LIVGELPKLG_					0	0	0			REV__tr|A0A7D6ZXY9|A0A7D6ZXY9_9CLOTGlycosidehydrolasefamily13proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01115PE=3SV=1	REV__tr|A0A7D6ZXY9|A0A7D6ZXY9_9CLOTGlycosidehydrolasefamily13proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01115PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1393920779228	2	519.831517	1037.64848	2.6568	0.0013811	-0.53574	-0.0002785	2.1211	0.0011026	520.3323377437184	58.777	0.25364	59.102	58.994	59.248	0.32553					12	7	2	0	0	0	0.12528	1	24627	24627		1.8442	0	1	1141200	+		18200	15771	8762	8801	21146	21146					0.13116363550875576
LIVGVDLVPI	10	Unmodified	_LIVGVDLVPI_					0	0	0		ENSG00000108592|ENST00000427159|FTSJ3;ENST00000577263.5_1_17:61903352-61904262:-|nuORF	ENSG00000108592|ENST00000427159|FTSJ3	ENSG00000108592|ENST00000427159|FTSJ3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.7364684939384	3	346.558354	1036.65323	0.084614	2.9324E-05	2.8739	0.00099598	2.9585	0.0010253	346.55942167765664	23.811	0.71254	25.052	24.897	25.609	1.241					29	22	3	0	0	0	0.12559	1	10160	10160		0.77653	0	1	511010			18201	1640	8763	8802	21147	21147					0.13637247693645804
LIVGVSWWDCL	11	Unmodified	_LIVGVSWWDCL_					0	0	0			REV__ENST00000542747.5_1_6:149997344-150023094:-|nuORF	REV__ENST00000542747.5_1_6:149997344-150023094:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8900634646416	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.322	1	93.258	92.758	93.758	0.93623								0	0	0	0.63775	1	38879	38879		0.094841	0.094841	1		+		18202	9811	8764	8803	21148	21148					0.014592008395311495
LIVINPFK	8	Unmodified	_LIVINPFK_					0	0	0		MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant;MYO9A|p.E2496Tfs*17|1|0.24|ENSG00000066933|chr15:71826742-71826743|-/ACCCACCTTTGGGAAGGGAAAAGAGGGTG|frameshift_variant;nc|ENSG00000066933|B2RTY4-2|MYO9A;ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-3|MYO9A;ENST00000563542.5_1_15:72185266-72338904:-|nuORF	MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant	MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	472.9727050662041	2	472.302396	942.590239	2.2002	0.0010391	-2.4295	-0.0011475	-0.22936	-0.00010833	472.3011672836142	40.08	0.19149	40.08	39.947	40.138	0					8	5	2	0	0	0	2.3239	1	16755	16755		8.5933	0.68312	1	366390			18203	814	8765	8804	21149	21149					0.11664726696278649
LIVIQGKVF	9	Unmodified	_LIVIQGKVF_					0	0	0			REV__ENSG00000120262|ENST00000239374|CCDC170	REV__ENSG00000120262|ENST00000239374|CCDC170	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8308898806572	2	508.828778	1015.643	4.5475	0.0023139	0.093641	4.7647E-05	4.6411	0.0023615	508.82838217769904	90.593	0.19209	91.574	91.493	91.685	0.98157					7	5	2	0	0	0	0.75267	1	38176	38176		5.2307	0	1	360700	+		18204	9567	8766	8805	21150	21150					0.1358068475908567
LIVKDSFLL	9	Unmodified	_LIVKDSFLL_					0	0	0		nc|ENSG00000075651|Q13393-3|PLD1;nc|ENSG00000075651|Q13393-4|PLD1;nc|ENSG00000075651|Q13393-2|PLD1;ENSG00000075651|ENST00000351298|PLD1	nc|ENSG00000075651|Q13393-3|PLD1	nc|ENSG00000075651|Q13393-3|PLD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3273803591728	2	524.326068	1046.63758	1.2499	0.00065535	0.71673	0.0003758	1.9666	0.0010312	524.3260618953127	79.964	0.49617	81.681	81.383	81.879	1.7167					25	15	2	0	0	0	0.27148	1	33575	33575		26.884	0.61551	1	1355200			18205	939	8767	8806	21151	21151					0.116129611766155
LIVKKKTLHL	10	Unmodified	_LIVKKKTLHL_					0	0	0			REV__ENST00000398958.6_1_1:28865070-28865289:+|nuORF	REV__ENST00000398958.6_1_1:28865070-28865289:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	398.2762328982353	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.189	1	83.86	83.36	84.36	1.67								0	0	0	0.66254	1	34479	34479		0.15932	0	1		+		18206	12873	8768	8807	21152	21152					0.21848282529981589
LIVLKAYLH	9	Unmodified	_LIVLKAYLH_					0	0	0			REV__ENSG00000258453|ENST00000556246|OR11H2	REV__ENSG00000258453|ENST00000556246|OR11H2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1646606326103	2	535.342052	1068.66955	2.379	0.0012736	1.4914	0.0007984	3.8703	0.002072	535.3436445992967	44.414	0.16032	46.374	46.255	46.415	1.9596					6	4	2	0	0	0	0.116	1	18609	18609		5.2307	2.9279	1	257420	+		18207	9789	8769	8808	21153	21153					0.13796373650393434
LIVLLQHIR	9	Unmodified	_LIVLLQHIR_					0	0	0			REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8669311404228	2	552.866226	1103.7179	2.713	0.0014999	-0.50793	-0.00028081	2.2051	0.0012191	552.8657791516833	107.52	0.23187	107.58	107.48	107.71	0.052444					43	11	5	0	0	0	0.85019	1	46054	46054		0.52476	0.12405	1	183510000	+		18208	14910	8770	8809	21154	21154					0.170188672903123
LIVLLQHIR	9	Unmodified	_LIVLLQHIR_					0	0	0			REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8664428591728	2	552.866226	1103.7179	3.0153	0.0016671	-2.4026	-0.0013283	0.6127	0.00033874	552.8647528329649	106.01	0.18857	106.17	106.08	106.27	0.1586					33	9	5	0	0	0	0.85019	1	45329	45329		0.52476	0	1	903030000	+		18209	14910	8770	8809	21155	21155					0.170188672903123
LIVLLQHIR	9	Unmodified	_LIVLLQHIR_					0	0	0			REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	REV__tr|A0A553SJL4|A0A553SJL4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_17065PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8669311404228	2	552.866226	1103.7179	3.1537	0.0017436	-2.6438	-0.0014617	0.50988	0.0002819	552.8647293780117	107.51	0.23145	107.67	107.52	107.75	0.15795					44	11	5	0	0	0	0.85019	1	46165	46165		0.52476	0.12405	1	1446200000	+		18210	14910	8770	8809	21156	21156					0.170188672903123
LIVTQTMK	8	Unmodified	_LIVTQTMK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	467.8878051638603	2	467.275521	932.536489	1.3388	0.00062558	0.36653	0.00017127	1.7053	0.00079685	467.27574047778614	22.94	0.20971	22.94	22.837	23.047	0					15	6	3	0	0	0	2.3239	1	9572	9572		30.637	2.1497	1	2330800		+	18211	339	8771	8810	21157	21157					0.06752186202254506
LIVTQTMK	8	Unmodified	_LIVTQTMK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	467.8871337771416	2	467.275521	932.536489	1.4293	0.00066786	-0.39657	-0.00018531	1.0327	0.00048256	467.27517039727985	22.734	0.17678	22.967	22.89	23.067	0.23306					7	5	2	0	0	0	2.3239	1	9484	9484		20.454	2.3186	1	501950		+	18212	339	8771	8810	21158	21158					0.06752186202254506
LIVVSRFHPK	10	Unmodified	_LIVVSRFHPK_					0	0	0			REV__tr|A0A553SRU6|A0A553SRU6_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01645PE=3SV=1	REV__tr|A0A553SRU6|A0A553SRU6_NIACIRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_01645PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508117556572	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.418	1	38.727	38.227	39.227	0.30857								0	0	0	0.66227	1	16163	16163		0.62683	0.063655	1		+		18213	15174	8772	8811	21159	21159					0.13413965801987615
LIVYNFLLL	9	Unmodified	_LIVYNFLLL_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.3461791872978	2	554.344261	1106.67397	1.3481	0.00074732	1.2791	0.00070908	2.6273	0.0014564	554.3447781461865	69.316	0.31469	69.639	69.469	69.784	0.32224					21	9	3	0	0	0	0.34572	1	29036	29036		23.148	3.8914	1	1585100	+		18214	9895	8773	8812	21160	21160					0.12489838073338433
LIWFTGSL	8	Unmodified	_LIWFTGSL_					0	0	0		nc|ENSG00000004809|Q86VW1-3|SLC22A16;nc|ENSG00000004809|Q86VW1-2|SLC22A16;ENSG00000004809|ENST00000368919|SLC22A16	nc|ENSG00000004809|Q86VW1-3|SLC22A16	nc|ENSG00000004809|Q86VW1-3|SLC22A16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7637512087822	2	468.763104	935.511654	1.45	0.00067969	-1.9168	-0.00089853	-0.46685	-0.00021884	468.7623225658714	55.337	0.26166	56.747	56.647	56.908	1.4099					14	8	2	0	0	0	0.86202	1	23185	23185		15.768	0	1	2051700			18215	474	8774	8813	21161	21161					0.04131874391191559
LIWFWVLPKYW	11	Unmodified	_LIWFWVLPKYW_					0	0	0			REV__nc|ENSG00000100433|P57789|KCNK10	REV__nc|ENSG00000100433|P57789|KCNK10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	518.3188964724541	3	517.623469	1549.84858	2.017	0.0010441	2.2981	0.0011895	4.3151	0.0022336	517.6248587500569	79.16	2.6363	79.16	77.905	80.541	0					127	84	2	0	0	0	0.14606	1	33058	33058		1.4551	0.24029	1	1527000	+		18216	8990	8775	8814	21162	21162					0.09564838218511795
LIWICDSGIR	10	Unmodified	_LIWICDSGIR_					0	0	0		ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	ENSG00000148154|ENST00000374279|UGCG	MSMS	GG20161007_CRH_Patient100_A02_01	1	588.3118163943291	2	588.315709	1174.61686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.666	1	55.666	55.166	56.166	0								0	0	0	0.65836	1	23188	23188		6.7232	0.51738	1				18217	3197	8776	8815	21163	21163					0.03654047525287751
LIWKTELIK	9	Unmodified	_LIWKTELIK_					0	0	0			REV__ENST00000449849.2_1_2:203789500-203789902:+|nuORF	REV__ENST00000449849.2_1_2:203789500-203789902:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	382.5848876833916	3	381.909387	1142.70633	0.28012	0.00010698	1.0253	0.00039158	1.3054	0.00049856	381.9106786179404	52.028	0.57679	53.425	53.29	53.867	1.3966					22	18	2	0	0	0	0.11581	1	21940	21940		4.5289	0.33936	1	779410	+		18218	13125	8777	8816	21164	21164					0.14068625476306806
LIWRTKKLKHT	11	Unmodified	_LIWRTKKLKHT_					0	0	0		ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	ENSG00000212126|ENST00000506868|TAS2R50	MSMS	GG20161007_CRH_Patient100_W632_01	3	712.4469482302666	2	712.448446	1422.88234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.26	103.76	104.76	0.16055								0	0	0	0.63775	1	44035	44035		0.35063	0	1				18219	5206	8778	8817	21165	21165					0.18781259710249287
LIYMKWRQKEK	11	Unmodified	_LIYMKWRQKEK_					0	0	0			REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.6248657107353	3	508.290273	1521.84899	2.0367	0.0010352	-1.8206	-0.00092542	0.21602	0.0001098	508.28937816721225	43.137	2.5523	43.137	42.634	45.187	0					227	81	5	0	0	0	1.0191	6	18061	17906;17956;18011;18061;18113;18272		2.6312	2.223	1	23254000	+		18220	14960	8779	8818	21166;21167;21168;21169;21170;21171	21169					0.10893889876024332
LIYMKWRQKEK	11	Unmodified	_LIYMKWRQKEK_					0	0	0			REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2910339236259	3	508.290273	1521.84899	2.029	0.0010313	-0.96737	-0.0004917	1.0616	0.00053962	508.2898218289922	42.627	2.0862	42.947	42.482	44.569	0.32058					186	67	5	0	0	0	0.98455	8	17845	17808;17845;17885;17961;18013;18107;18310;18359		4.7159	4.3077	1	27875000	+		18221	14960	8779	8818	21172;21173;21174;21175;21176;21177;21178;21179	21173					0.10893889876024332
LIYMKWRQKEK	11	Unmodified	_LIYMKWRQKEK_					0	0	0			REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	REV__tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2903930544853	3	508.290273	1521.84899	2.0526	0.0010433	-1.7811	-0.00090531	0.2715	0.000138	508.2895251824551	40.001	0.68104	41.864	41.615	42.296	1.8624					54	21	5	0	0	0	1.0254	2	16768	16768;16808		2.2527	0.79761	1	9840600	+		18222	14960	8779	8818	21180;21181	21180					0.10893889876024332
LIYSTACGF	9	Unmodified	_LIYSTACGF_					0	0	0			REV__ENSG00000175097|ENST00000311485|RAG2	REV__ENSG00000175097|ENST00000311485|RAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7359496951103	2	487.736228	973.457904	1.7693	0.00086293	-3.0544	-0.0014897	-1.2851	-0.0006268	487.73476739399126	41.761	1.3986	43.654	43.296	44.694	1.8927					90	44	3	0	0	0	0.54523	1	17470	17470		13.508	1.8676	1	1845000	+		18223	11144	8780	8819	21182	21182					-0.029886661028285744
LIYVAFLR	8	Unmodified	_LIYVAFLR_					0	0	0		ENST00000465915.1_1_3:127294026-127294397:-|nuORF;ENSG00000163870|ENST00000355552|TPRA1	ENST00000465915.1_1_3:127294026-127294397:-|nuORF	ENST00000465915.1_1_3:127294026-127294397:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2067443728447	3	332.207656	993.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.138	1	46.138	45.638	46.638	0								0	0	0	1.0178	1	19296	19296		1.4819	1.0236	1				18224	3727	8781	8820	21183	21183					0.1040812907056079
LKAKGKGK	8	Unmodified	_LKAKGKGK_					0	0	0			REV__nc|ENSG00000010072|Q9H040-3|SPRTN	REV__nc|ENSG00000010072|Q9H040-3|SPRTN	MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2853881716728	2	415.284537	828.554522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.69	1	115.88	115.38	116.38	0.18399								0	0	0	1.0178	1	50089	50089		0	0	1		+		18225	8527	8782	8821	21184	21184					0.1333868923928776
LKAQVLERQPK	11	Unmodified	_LKAQVLERQPK_					0	0	0		nc|ENSG00000152942|O75943-4|RAD17;ENSG00000152942|ENST00000354868|RAD17;nc|ENSG00000152942|O75943|RAD17	nc|ENSG00000152942|O75943-4|RAD17	nc|ENSG00000152942|O75943-4|RAD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2033264040947	4	328.204219	1308.78777	-2.0442	-0.00067092	-1.3499	-0.00044303	-3.3941	-0.0011139	328.20352267034457	39.607	1.16	39.607	39.171	40.331	0					130	36	5	0	0	0	0.99899	2	16583	16583;16660		3.8459	1.4111	1	23377000			18226	3342	8783	8822	21185;21186	21185					0.1457270116827658
LKAVKKQS	8	Unmodified	_LKAVKKQS_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.2003661990166	3	301.19916	900.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.26	1	104.42	103.92	104.92	0.16055								0	0	0	1.0178	1	44123	44123		0.35063	0	1		+		18227	10035	8784	8823	21187	21187					0.12138654548141403
LKAVKKQS	8	Unmodified	_LKAVKKQS_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.2000915408134	3	301.19916	900.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.21	1	104.39	103.89	104.89	0.1731								0	0	0	1.0178	1	44037	44037		0.35063	0	1		+		18228	10035	8784	8823	21188	21188					0.12138654548141403
LKDELASTK	9	Unmodified	_LKDELASTK_					0	0	0		nc|ENSG00000185825|P51572-2|BCAP31;ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF	nc|ENSG00000185825|P51572-2|BCAP31	nc|ENSG00000185825|P51572-2|BCAP31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	335.5253478884697	3	335.525602	1003.55498	-1.5415	-0.00051722	0.14667	4.9212E-05	-1.3948	-0.000468	335.5255512245951	11.787	0.12572	12.48	12.385	12.511	0.69396					5	3	2	0	0	0	0.66458	1	4897	4897		5.7834	0	1	222900			18229	4763	8785	8824	21189	21189					0.05334019377812638
LKDELASTK	9	Unmodified	_LKDELASTK_					0	0	0		nc|ENSG00000185825|P51572-2|BCAP31;ENSG00000185825|ENST00000345046|BCAP31;ENST00000563143.2_1_16:32882346-32883351:+|nuORF	nc|ENSG00000185825|P51572-2|BCAP31	nc|ENSG00000185825|P51572-2|BCAP31	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	335.525602	1003.55498	-0.45606	-0.00015302	-0.35225	-0.00011819	-0.80832	-0.00027121	335.52536766748597	11.639	0.09604	12.401	12.351	12.447	0.76165	-0.039922	-0.0001881	NaN	5.7834	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370810			18230	4763	8785	8824							0.05334019377812638
LKDIERMSE	9	Unmodified	_LKDIERMSE_					0	0	0		tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1	tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1	tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.8257934451103	2	560.786981	1119.55941	3.2036	0.0017965	-3.9221	-0.0021994	-0.71847	-0.00040291	560.7840448198929	64.546	0.36928	65.953	65.71	66.079	1.4071					15	11	2	0	0	0	0.098208	1	27003	27003		18.146	6.6516	1	364780			18231	16444	8786	8825	21190	21190					0.004411605290670195
LKDVKSTL	8	Unmodified	_LKDVKSTL_					0	0	0		ENSG00000204599|ENST00000396551|TRIM39;nc|ENSG00000204599|Q9HCM9|TRIM39	ENSG00000204599|ENST00000396551|TRIM39	ENSG00000204599|ENST00000396551|TRIM39	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2781860232353	2	452.279118	902.543683	2.4539	0.0011099	-2.8773	-0.0013013	-0.42335	-0.00019147	452.27742662701905	71.761	0.37474	73.585	73.381	73.756	1.824					16	11	2	0	0	0	0.8909	1	30090	30090		2.0598	0	1	931930			18232	5153	8787	8826	21191	21191					0.08851242074331367
LKDVKSTL	8	Unmodified	_LKDVKSTL_					0	0	0		ENSG00000204599|ENST00000396551|TRIM39;nc|ENSG00000204599|Q9HCM9|TRIM39	ENSG00000204599|ENST00000396551|TRIM39	ENSG00000204599|ENST00000396551|TRIM39	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.279118	902.543683	2.3334	0.0010553	-3.599	-0.0016277	-1.2656	-0.00057241	452.27732837108357	72.046	0.34386	73.387	73.248	73.592	1.3415	-0.046842	-0.00012308	NaN	2.0598	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	823350			18233	5153	8787	8826							0.08851242074331367
LKEAIINRR	9	Unmodified	_LKEAIINRR_					0	0	0		tr|A0A7D7A3X6|A0A7D7A3X6_9CLOTPutativeNAD(P)HnitroreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01255PE=3SV=1	tr|A0A7D7A3X6|A0A7D7A3X6_9CLOTPutativeNAD(P)HnitroreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01255PE=3SV=1	tr|A0A7D7A3X6|A0A7D7A3X6_9CLOTPutativeNAD(P)HnitroreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01255PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1015502810478	3	371.568135	1111.68258	1.8089	0.00067214	2.9456	0.0010945	4.7545	0.0017666	371.56883930537697	77.524	0.50185	77.841	77.574	78.076	0.31653					34	15	3	0	0	0	0.11941	1	32459	32459		1.0715	0	1	1870700			18234	17280	8788	8827	21192	21192					0.13120204762503818
LKEALEEL	8	Unmodified	_LKEALEEL_					0	0	0			REV__tr|A0A7D6ZTR6|A0A7D6ZTR6_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06940PE=4SV=1	REV__tr|A0A7D6ZTR6|A0A7D6ZTR6_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06940PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	473.2957946658134	2	472.768583	943.522613	3.6204	0.0017116	1.4594	0.00068994	5.0798	0.0024016	472.7697905338813	60.342	0.2539	62.308	62.26	62.514	1.9653					10	7	2	0	0	0	2.3239	1	25382	25382		11.64	0	1	1606400	+		18235	15718	8789	8828	21193	21193					0.04859231974819522
LKEFYLKLK	9	Unmodified	_LKEFYLKLK_					0	0	0		tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	394.2478515505791	3	394.58127	1180.72198	4.448	0.0017551	-1.5005	-0.00059208	2.9475	0.001163	394.5806829930081	89.373	0.49886	90.778	90.488	90.986	1.4044					39	15	3	0	0	0	0.11944	1	37622	37622		0.96228	0	1	5093200			18236	16625	8790	8829	21194	21194					0.1388491199334112
LKEGRRGP	8	Unmodified	_LKEGRRGP_					0	0	0			REV__ENST00000478082.5_1_7:100856177-100861250:-|nuORF	REV__ENST00000478082.5_1_7:100856177-100861250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.7735778689384	2	456.772326	911.530098	2.3782	0.0010863	0.17012	7.7705E-05	2.5483	0.001164	456.77228369656086	71.907	0.60027	72.232	71.882	72.483	0.32494					51	18	4	0	0	0	0.8909	1	30014	30014		2.0598	0.21551	1	12516000	+		18237	13323	8791	8830	21195	21195					0.07079429085752054
LKEHALLVPS	10	Unmodified	_LKEHALLVPS_					0	0	0			REV__ENST00000578846.5_1_17:80019305-80021015:-|nuORF	REV__ENST00000578846.5_1_17:80019305-80021015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8315917849541	2	553.832049	1105.64954	1.3705	0.00075904	-2.489	-0.0013785	-1.1185	-0.00061944	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	0.89803	1	30929	30929		1.3295	0.13619	1	2354100	+		18238	13993	8792	8831	21196	21196					0.10094577919790026
LKEHALLVPS	10	Unmodified	_LKEHALLVPS_					0	0	0			REV__ENST00000578846.5_1_17:80019305-80021015:-|nuORF	REV__ENST00000578846.5_1_17:80019305-80021015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8295165896416	2	553.832049	1105.64954	1.2808	0.00070934	-3.4528	-0.0019123	-2.172	-0.0012029	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.89803	1	29508	29508		1.3295	0.13619	1	2160700	+		18239	13993	8792	8831	21197	21197					0.10094577919790026
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	656.9072143435478	2	656.906611	1311.79867	1.8866	0.0012393	-3.0218	-0.0019851	-1.1352	-0.00074573	656.9043069912594	95.935	0.26292	95.935	95.773	96.035	0					28	8	4	0	0	0	0.8974	2	40074	40074;40124		1.4819	0	1	28499000	+		18240	10541	8793	8832	21198;21199	21198					0.15524103542543344
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	656.9059326052666	2	656.906611	1311.79867	2.6279	0.0017263	-2.35	-0.0015438	0.27789	0.00018255	656.9047016161086	95.834	0.2779	95.957	95.801	96.079	0.12331					32	9	4	0	0	0	0.8974	1	40131	40131		1.4819	0	1	27961000	+		18241	10541	8793	8832	21200	21200					0.15524103542543344
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	438.2746765017509	3	438.273499	1311.79867	4.2446	0.0018603	2.4179	0.0010597	6.6625	0.00292	438.27444087314257	95.412	0.36407	95.834	95.675	96.039	0.4212					43	13	4	0	0	0	0.89803	2	40116	40116;40209		1.4551	0.82829	1	7997100	+		18242	10541	8793	8832	21201;21202	21201					0.15524103542543344
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.2748290896416	3	438.273499	1311.79867	3.3579	0.0014717	0.88816	0.00038926	4.2461	0.001861	438.27373826432637	95.151	0.45604	95.553	95.284	95.74	0.40208					57	18	4	0	0	0	0.89803	2	39987	39987;40077		1.4551	0.82829	1	9883600	+		18243	10541	8793	8832	21203;21204	21203					0.15524103542543344
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	656.906611	1311.79867	1.8866	0.0012393	-3.0218	-0.0019851	-1.1352	-0.00074573	656.9043069912594	95.935	0.26292	95.935	95.773	96.035	0	-0.011298	-0.00037823	NaN	1.4819	28	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28499000	+		18244	10541	8793	8832							0.15524103542543344
LKEIRQRKIE	10	Unmodified	_LKEIRQRKIE_					0	0	0			REV__ENSG00000157856|ENST00000288710|DRC1	REV__ENSG00000157856|ENST00000288710|DRC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	656.906611	1311.79867	2.6279	0.0017263	-2.35	-0.0015438	0.27789	0.00018255	656.9047016161086	95.834	0.2779	95.957	95.801	96.079	0.12331	0.011298	0.00050436	NaN	1.4819	32	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27961000	+		18245	10541	8793	8832							0.15524103542543344
LKEISVVVHL	10	Unmodified	_LKEISVVVHL_					0	0	0		ENSG00000182050|ENST00000611864|MGAT4C;nc|ENSG00000182050|Q9UBM8-2|MGAT4C	ENSG00000182050|ENST00000611864|MGAT4C	ENSG00000182050|ENST00000611864|MGAT4C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.5724059939384	3	379.572775	1135.69649	0.37477	0.00014225	-1.4904	-0.00056571	-1.1156	-0.00042345	379.5721766579097	88.385	0.51817	88.385	88.15	88.668	0					50	16	5	0	0	0	0.88031	1	37004	37004		3.5871	0.5148	1	17017000			18246	4593	8794	8833	21205	21205					0.1340743747093711
LKEKAKKRKGR	11	Unmodified	_LKEKAKKRKGR_					0	0	0		nc|ENSG00000265241|Q9Y5S9-2|RBM8A;ENSG00000265241|ENST00000583313|RBM8A	nc|ENSG00000265241|Q9Y5S9-2|RBM8A	nc|ENSG00000265241|Q9Y5S9-2|RBM8A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	671.4440795779228	2	671.443695	1340.87284	1.4692	0.0009865	-0.17729	-0.00011904	1.2919	0.00086746	671.4429316995955	107.36	0.14711	107.36	107.26	107.41	0					20	6	4	0	0	0	1.0366	1	45995	45995		1.1933	0	1	47925000			18247	5433	8795	8834	21206	21206					0.216034914247075
LKEKAKKRKGR	11	Unmodified	_LKEKAKKRKGR_					0	0	0		nc|ENSG00000265241|Q9Y5S9-2|RBM8A;ENSG00000265241|ENST00000583313|RBM8A	nc|ENSG00000265241|Q9Y5S9-2|RBM8A	nc|ENSG00000265241|Q9Y5S9-2|RBM8A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	671.4458495974541	2	671.443695	1340.87284	2.6791	0.0017989	-0.19669	-0.00013207	2.4824	0.0016668	671.4436239542181	107.31	0.16799	107.36	107.27	107.44	0.052444					23	7	4	0	0	0	1.0366	1	45869	45869		1.1933	0	1	58751000			18248	5433	8795	8834	21207	21207					0.216034914247075
LKEKCLIVKQK	11	Unmodified	_LKEKCLIVKQK_					0	0	0		LRRIQ3|p.S549C|1|0.77|ENSG00000162620|chr1:74041286-74041286|T/A|missense_variant	LRRIQ3|p.S549C|1|0.77|ENSG00000162620|chr1:74041286-74041286|T/A|missense_variant	LRRIQ3|p.S549C|1|0.77|ENSG00000162620|chr1:74041286-74041286|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	443.9486572146416	3	443.947736	1328.82138	1.3391	0.00059449	-0.1306	-5.798E-05	1.2085	0.00053651	443.947689289891	95.926	0.28997	95.926	95.773	96.063	0					29	9	4	0	0	0	1.0365	1	40083	40083		1.2148	0.10508	1	35702000			18249	7785	8796	8835	21208	21208					0.17011986615807473
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.6419250369072	3	471.640182	1411.89872	3.3143	0.0015632	0.057944	2.7329E-05	3.3723	0.0015905	471.64007444840666	105.81	0.14857	105.97	105.89	106.04	0.1586					20	7	4	0	0	0	1.0391	1	45162	45162		0.40827	0	1	53190000			18250	241	8797	8836	21209	21209					0.2092434087633137
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	706.9596435427666	2	706.956635	1411.89872	2.6942	0.0019047	0.014907	1.0538E-05	2.7091	0.0019152	706.9566641430295	107.21	0.15607	107.37	107.28	107.43	0.15781					23	7	4	0	0	0	1.0391	1	46051	46051		1.1933	0	1	55506000			18251	241	8797	8836	21210	21210					0.2092434087633137
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	706.9578124880791	2	706.956635	1411.89872	2.5685	0.0018158	-1.2163	-0.00085986	1.3522	0.00095595	706.9555142169343	105.79	0.13092	105.96	105.88	106.01	0.16679					16	6	3	0	0	0	1.0391	1	45077	45077		1.1933	0.79263	1	93737000			18252	241	8797	8836	21211	21211					0.2092434087633137
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	706.956635	1411.89872	2.6996	0.0019085	0.85044	0.00060122	3.55	0.0025097	707.4574377936065	107.23	0.086815	107.28	107.22	107.31	0.052452	-0.055433	0.00079621	NaN	1.1933	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5887700			18253	241	8797	8836							0.2092434087633137
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	706.956635	1411.89872	2.6942	0.0019047	0.014907	1.0538E-05	2.7091	0.0019152	706.9566641430295	107.21	0.15607	107.37	107.28	107.43	0.15781	0.030239	-0.00038516	NaN	1.1933	23	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55506000			18254	241	8797	8836							0.2092434087633137
LKEKKEVVRKR	11	Unmodified	_LKEKKEVVRKR_					0	0	0		chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	chr2:231711371-231712443|420|47.66|0.11|8.7|+|0|None,PTMA|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	706.956635	1411.89872	2.566	0.0018141	0.51035	0.00036079	3.0764	0.0021749	706.956717078525	107.2	0.16128	107.36	107.27	107.43	0.15795	0.025193	0.00031535	NaN	1.1933	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40058000			18255	241	8797	8836							0.2092434087633137
LKEKKINSIQR	11	Unmodified	_LKEKKINSIQR_					0	0	0			REV__nc|ENSG00000169554|O60315-2|ZEB2	REV__nc|ENSG00000169554|O60315-2|ZEB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.9485046267509	3	452.948904	1355.82488	1.5044	0.00068141	-2.3964	-0.0010854	-0.89201	-0.00040403	452.9478187204065	96.719	0.22778	96.719	96.602	96.83	0					28	7	5	0	0	0	1.0214	1	40450	40450		1.0136	0	1	52695000	+		18256	10953	8798	8837	21212	21212					0.1612037271402187
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	693.4579345583916	2	693.454882	1384.89521	1.4371	0.00099659	2.8458	0.0019734	4.2829	0.00297	693.4564995597556	105.9	0.11617	105.9	105.84	105.95	0					10	5	2	0	0	0	1.0174	1	45059	45059		2.7352	1.4057	1	50579000	+		18257	10199	8799	8838	21213	21213					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	693.4572631716728	2	693.454882	1384.89521	2.692	0.0018668	1.086	0.0007531	3.778	0.0026199	693.455108389399	105.85	0.1217	105.91	105.84	105.96	0.05455					14	5	3	0	0	0	1.0174	1	44986	44986		2.7352	1.4057	1	81074000	+		18258	10199	8799	8838	21214	21214					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.4597656130791	2	693.454882	1384.89521	2.7795	0.0019275	1.4586	0.0010115	4.2381	0.0029389	693.4556251360372	105.83	0.1513	105.99	105.91	106.06	0.15859					25	7	4	0	0	0	1.0174	1	45151	45151		2.7352	1.5419	1	386340000	+		18259	10199	8799	8838	21215	21215					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	462.6401244997978	3	462.639014	1384.89521	3.3611	0.001555	1.5842	0.00073293	4.9453	0.0022879	462.638824841456	105.85	0.13348	106.01	105.92	106.06	0.1586					15	6	3	0	0	0	1.0174	1	45193	45193		1.1098	0.70149	1	17060000	+		18260	10199	8799	8838	21216	21216					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	693.4576293826103	2	693.454882	1384.89521	2.5679	0.0017807	0.58896	0.00040841	3.1568	0.0021891	693.4550345685662	105.82	0.15131	105.99	105.9	106.05	0.16679					24	7	4	0	0	0	1.0174	1	45082	45082		2.7352	1.4057	1	233460000	+		18261	10199	8799	8838	21217	21217					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	462.6401855349541	3	462.639014	1384.89521	3.5266	0.0016316	0.99892	0.00046214	4.5256	0.0020937	462.63862669031903	105.82	0.11345	105.99	105.92	106.03	0.16679					13	5	3	0	0	0	1.0174	1	45112	45112		1.1098	0.70149	1	24490000	+		18262	10199	8799	8838	21218	21218					0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	693.454882	1384.89521	1.4371	0.00099659	2.8458	0.0019734	4.2829	0.00297	693.4564995597556	105.9	0.11617	105.9	105.84	105.95	0	-0.044231	0.0018361	NaN	2.7352	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50579000	+		18263	10199	8799	8838							0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	693.454882	1384.89521	2.692	0.0018668	1.086	0.0007531	3.778	0.0026199	693.455108389399	105.85	0.1217	105.91	105.84	105.96	0.05455	-0.038653	-0.00060453	NaN	2.7352	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81074000	+		18264	10199	8799	8838							0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	693.454882	1384.89521	2.7795	0.0019275	1.4586	0.0010115	4.2381	0.0029389	693.4556251360372	105.83	0.1513	105.99	105.91	106.06	0.15859	0.04312	-8.7827E-05	NaN	2.7352	25	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386340000	+		18265	10199	8799	8838							0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	462.639014	1384.89521	3.3611	0.001555	1.5842	0.00073293	4.9453	0.0022879	462.638824841456	105.85	0.13348	106.01	105.92	106.06	0.1586	0.012843	0.00047877	NaN	1.1098	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17060000	+		18266	10199	8799	8838							0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	693.454882	1384.89521	2.5679	0.0017807	0.58896	0.00040841	3.1568	0.0021891	693.4550345685662	105.82	0.15131	105.99	105.9	106.05	0.16679	0.039764	-0.0012939	NaN	2.7352	24	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233460000	+		18267	10199	8799	8838							0.21815954778116975
LKEKKVIMLRK	11	Unmodified	_LKEKKVIMLRK_					0	0	0			REV__ENSG00000143228|ENST00000271452|NUF2	REV__ENSG00000143228|ENST00000271452|NUF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	462.639014	1384.89521	3.5266	0.0016316	0.99892	0.00046214	4.5256	0.0020937	462.63862669031903	105.82	0.11345	105.99	105.92	106.03	0.16679	-0.012843	-0.00033361	NaN	1.1098	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24490000	+		18268	10199	8799	8838							0.21815954778116975
LKEKSQLIR	9	Unmodified	_LKEKSQLIR_					0	0	0			REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	REV__nc|ENSG00000066455|Q8TBA6-2|GOLGA5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.2972900271416	2	557.850773	1113.68699	2.1807	0.0012165	-0.80657	-0.00044995	1.3742	0.00076657	557.8504124844673	45.431	0.25816	46.797	46.692	46.951	1.3653					10	7	2	0	0	0	0.1188	1	19070	19070		3.2813	0	1	637600	+		18269	8685	8800	8839	21219	21219					0.1346966918540602
LKELALKAMRL	11	Unmodified	_LKELALKAMRL_					0	0	0			REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2743408083916	3	429.272331	1284.79516	3.0434	0.0013065	1.935	0.00083066	4.9784	0.0021371	429.2730918306361	94.287	0.56697	94.432	94.133	94.7	0.14493					58	17	4	0	0	0	1.0365	1	39405	39405		1.2148	0.51716	1	18456000	+		18270	12178	8801	8840	21220	21220					0.16415717444328948
LKELALKAMRL	11	Unmodified	_LKELALKAMRL_					0	0	0			REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	REV__ENST00000260731.4_1_10:94366146-94368792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.2740966677666	3	429.272331	1284.79516	3.305	0.0014188	2.0941	0.00089892	5.3991	0.0023177	429.27306872150893	93.254	0.53637	94.531	94.292	94.828	1.277					50	16	4	0	0	0	1.0391	1	39298	39298		0.40827	0.40827	1	9740400	+		18271	12178	8801	8840	21221	21221					0.16415717444328948
LKELGHITLKF	11	Unmodified	_LKELGHITLKF_					0	0	0		tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.9010497927666	2	649.89518	1297.77581	4.7282	0.0030728	2.8292	0.0018387	7.5574	0.0049115	650.397648492846	87.981	0.19267	89.428	89.38	89.572	1.4467					6	5	2	0	0	0	1.0366	1	37108	37108		1.1933	0.59184	1	683700			18272	16763	8802	8841	21222	21222					0.13883084425060588
LKELGHITLKF	11	Unmodified	_LKELGHITLKF_					0	0	0		tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	649.89518	1297.77581	2.675	0.0017385	3.301	0.0021453	5.976	0.0038838	649.8979465753652	89.157	0.44559	89.157	88.955	89.4	0	-0.12422	-0.0011674	NaN	1.1933	26	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	983420			18273	16763	8802	8841							0.13883084425060588
LKELGHITLKF	11	Unmodified	_LKELGHITLKF_					0	0	0		tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	649.89518	1297.77581	2.5301	0.0016443	4.8149	0.0031292	7.345	0.0047735	649.8983163296322	89.015	0.45078	89.238	89.004	89.454	0.22359	-0.043396	0.00080033	NaN	1.1933	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	758940			18274	16763	8802	8841							0.13883084425060588
LKELGHITLKF	11	Unmodified	_LKELGHITLKF_					0	0	0		tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	tr|A0A7D6VPF2|A0A7D6VPF2_9CLOTPTSglucitol/sorbitoltransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_22670PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	649.89518	1297.77581	5.228	0.0033976	4.4664	0.0029027	9.6943	0.0063003	649.8978973406207	88.247	0.3215	89.303	89.176	89.498	1.0562	0.0216	0.00034733	NaN	1.1933	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	512950			18275	16763	8802	8841							0.13883084425060588
LKELQIVL	8	Unmodified	_LKELQIVL_					0	0	0		ENST00000313695.11_2_1:155917579-155917702:-|nuORF	ENST00000313695.11_2_1:155917579-155917702:-|nuORF	ENST00000313695.11_2_1:155917579-155917702:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3135253787041	2	478.312961	954.611368	3.2646	0.0015615	-1.8109	-0.00086618	1.4537	0.00069535	478.31184516411867	105.92	0.081696	106.08	106.05	106.13	0.16679					5	3	2	0	0	0	0.89181	1	45180	45180		0.6015	0	1	10084000			18276	5816	8803	8842	21223	21223					0.13224692005132965
LKELRHLKM	9	Unmodified	_LKELRHLKM_					0	0	0		ENST00000485726.1_1_7:103828364-103848439:-|nuORF	ENST00000485726.1_1_7:103828364-103848439:-|nuORF	ENST00000485726.1_1_7:103828364-103848439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3578979372978	2	584.355168	1166.69578	2.1623	0.0012636	1.5755	0.00092064	3.7378	0.0021842	584.3561690421724	76.208	1.0234	76.529	76.209	77.232	0.32163					53	32	3	0	0	0	0.85068	1	31919	31919		0.45834	0	1	3221500			18277	6855	8804	8843	21224	21224					0.11910319550224813
LKELVLLLL	9	Unmodified	_LKELVLLLL_					0	0	0		ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	527.4046508669853	2	527.367736	1052.72092	1.348	0.00071089	-0.92506	-0.00048785	0.42294	0.00022304	527.3671382859371	105.55	0.1806	105.55	105.48	105.66	0					15	8	2	0	0	0	0.11916	1	44852	44852		1.8442	0	1	8408500			18278	7317	8805	8844	21225	21225					0.1966669762446145
LKELVLLLL	9	Unmodified	_LKELVLLLL_					0	0	0		ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	527.367736	1052.72092	2.9083	0.0015337	-2.8542	-0.0015052	0.054067	2.8513E-05	527.3655334468866	105.51	0.17356	105.57	105.51	105.69	0.056801	-0.063346	-0.00057459	NaN	1.8442	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13658000			18279	7317	8805	8844							0.1966669762446145
LKELVLLLL	9	Unmodified	_LKELVLLLL_					0	0	0		ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.367736	1052.72092	3.17	0.0016718	-3.689	-0.0019455	-0.51903	-0.00027372	527.364919776016	105.55	0.18176	105.71	105.57	105.75	0.15859	0.083664	-0.0014551	NaN	1.8442	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2428900			18280	7317	8805	8844							0.1966669762446145
LKELVLLLL	9	Unmodified	_LKELVLLLL_					0	0	0		ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	ENST00000558791.5_1_15:44719859-44751301:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	527.367736	1052.72092	3.3433	0.0017632	-4.3375	-0.0022874	-0.99415	-0.00052428	527.3649766450453	105.52	0.15959	105.68	105.57	105.73	0.16679	0.054351	-0.0021391	NaN	1.8442	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4191400			18281	7317	8805	8844							0.1966669762446145
LKEPLRKMKV	10	Unmodified	_LKEPLRKMKV_					0	0	0		ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.5983459353447	3	414.596926	1240.76895	2.8851	0.0011961	0.20129	8.3453E-05	3.0864	0.0012796	414.59689974619147	92.381	0.49396	92.549	92.281	92.775	0.16835					60	15	5	0	0	0	0.89803	1	38648	38648		0.62683	0	1	26035000			18282	7076	8806	8845	21226	21226					0.15819448272850423
LKEPLRKMKV	10	Unmodified	_LKEPLRKMKV_					0	0	0		ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	621.3931152224541	2	621.391751	1240.76895	2.5607	0.0015912	0.2015	0.00012521	2.7622	0.0017164	621.3918986658688	92.381	0.49396	92.549	92.281	92.775	0.16835					62	15	5	0	0	0	0.89803	2	38685	38685;38739		1.4819	0	1	36437000			18283	7076	8806	8845	21227;21228	21227					0.15819448272850423
LKEPLRKMKV	10	Unmodified	_LKEPLRKMKV_					0	0	0		ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.3942138552666	2	621.391751	1240.76895	3.8538	0.0023947	-0.55893	-0.00034731	3.2949	0.0020474	621.3913543517785	91.666	0.49023	92.602	92.34	92.83	0.93623					47	15	4	0	0	0	0.89803	1	38563	38563		1.4819	0	1	12629000			18284	7076	8806	8845	21229	21229					0.15819448272850423
LKEPLRKMKV	10	Unmodified	_LKEPLRKMKV_					0	0	0		ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	ENST00000519851.5_1_8:18711677-18711773:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.5986511111259	3	414.596926	1240.76895	3.9593	0.0016415	-0.34198	-0.00014178	3.6173	0.0014997	414.59670084319845	91.709	0.45844	92.645	92.372	92.83	0.93623					48	14	4	0	0	0	0.89803	1	38564	38564		0.62683	0	1	9027400			18285	7076	8806	8845	21230	21230					0.15819448272850423
LKEQRRWKAR	10	Unmodified	_LKEQRRWKAR_					0	0	0			REV__nc|ENSG00000106331|O43316-2|PAX4	REV__nc|ENSG00000106331|O43316-2|PAX4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9097778201103	2	685.910019	1369.80549	2.4966	0.0017124	-1.6735	-0.0011479	0.82306	0.00056454	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	0.89803	1	35646	35646		1.4819	0.28856	1	4704100	+		18286	9207	8807	8846	21231	21231					0.1353746121376389
LKERKRIKRA	10	Unmodified	_LKERKRIKRA_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-2|PPM1L;nc|ENSG00000163590|Q5SGD2-3|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	649.4329711794853	2	649.430587	1296.84662	2.6663	0.0017316	1.666	0.001082	4.3323	0.0028135	649.4314593127899	107.35	0.18986	107.41	107.31	107.5	0.052452					25	8	4	0	0	0	0.89803	1	45894	45894		1.4819	0	1	67372000			18287	3700	8808	8847	21232	21232					0.21007222253228974
LKERKRIKRA	10	Unmodified	_LKERKRIKRA_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-2|PPM1L;nc|ENSG00000163590|Q5SGD2-3|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	649.430587	1296.84662	3.2809	0.0021307	0.04039	2.6231E-05	3.3213	0.002157	649.430553688515	107.32	0.23013	107.48	107.37	107.6	0.15795	0.037717	-0.0013526	NaN	1.4819	35	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550510000			18288	3700	8808	8847							0.21007222253228974
LKERKRYLKMK	11	Unmodified	_LKERKRYLKMK_					0	0	0			REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	REV__ENST00000393667.7_1_3:121448147-121448746:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.3116943240166	3	498.309667	1491.90717	3.2244	0.0016068	0.93788	0.00046735	4.1623	0.0020741	498.30969825803487	88.797	1.0188	89.021	88.436	89.454	0.22359					69	31	3	0	0	0	1.0402	1	37220	37220		0.073264	0	1	1835800	+		18289	12817	8809	8848	21233	21233					0.1808957152129551
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8965942263603	2	663.896243	1325.77793	2.3625	0.0015684	-1.0947	-0.00072678	1.2678	0.00084166	663.8961210891454	82.059	0.69994	82.059	81.915	82.615	0					49	22	3	0	0	0	1.037	1	34215	34215		1.0715	0	1	1314900	+		18290	8899	8810	8849	21234	21234					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8968383669853	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0174	4	34677	34624;34677;34781;34991		2.7352	0	1	6935600	+		18291	8899	8810	8849	21235;21236;21237;21238	21236					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8981201052666	2	663.896243	1325.77793	1.9365	0.0012856	-0.5922	-0.00039316	1.3443	0.00089244	663.8956032949152	81.132	1.7839	81.422	80.623	82.407	0.29056					129	57	3	0	0	0	1.037	4	33691	33691;33739;33807;33857		1.0715	0	1	3097800	+		18292	8899	8810	8849	21239;21240;21241;21242	21239					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8985473513603	2	663.896243	1325.77793	2.0653	0.0013711	-0.44463	-0.00029519	1.6206	0.0010759	663.8966736139787	81.887	0.82903	82.167	81.906	82.735	0.2802					48	26	2	0	0	0	1.037	2	34172	34172;34247		1.0715	0	1	1327400	+		18293	8899	8810	8849	21243;21244	21243					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8972045779228	2	663.896243	1325.77793	2.1919	0.0014552	-0.51518	-0.00034203	1.6767	0.0011131	663.8957978467892	82.842	0.67295	83.113	82.695	83.368	0.27029					64	21	4	0	0	0	1.037	1	34662	34662		1.0715	0	1	4141500	+		18294	8899	8810	8849	21245	21245					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8971435427666	2	663.896243	1325.77793	2.3028	0.0015288	-0.35089	-0.00023295	1.952	0.0012959	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0174	1	34945	34945		2.7352	0.23671	1	5935800	+		18295	8899	8810	8849	21246	21246					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8961669802666	2	663.896243	1325.77793	2.4525	0.0016282	-0.076299	-5.0654E-05	2.3762	0.0015776	663.895955838561	80.436	1.3194	81.688	80.769	82.088	1.2512					99	42	3	0	0	0	1.0214	2	33850	33651;33850		2.4985	1.169	1	2397800	+		18296	8899	8810	8849	21247;21248	21248					0.12807513162874784
LKERLQLANNK	11	Unmodified	_LKERLQLANNK_					0	0	0			REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	REV__nc|ENSG00000091128|A4D0S4-3|LAMB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.9001342654228	2	663.896243	1325.77793	3.0629	0.0020334	-0.17079	-0.00011339	2.8921	0.00192	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0174	2	34568	34309;34568		2.7352	0	1	4887400	+		18297	8899	8810	8849	21249;21250	21250					0.12807513162874784
LKERRKTL	8	Unmodified	_LKERRKTL_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3403808474541	2	522.337833	1042.66111	2.9211	0.0015258	2.3872	0.0012469	5.3083	0.0027727	522.3388464045956	106.06	0.15126	106.12	106.04	106.19	0.05455					20	6	4	0	0	0	0.89181	1	45103	45103		0.6015	0	1	208560000	+		18298	10091	8811	8850	21251	21251					0.14148819733804885
LKERRKTL	8	Unmodified	_LKERRKTL_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3403198122978	2	522.337833	1042.66111	3.2647	0.0017053	1.7025	0.00088929	4.9672	0.0025946	522.3385735221534	106.05	0.20364	106.2	106.1	106.3	0.15781					38	10	5	0	0	0	0.89051	1	45278	45278		2.3027	0	1	1007299999.9999999	+		18299	10091	8811	8850	21252	21252					0.14148819733804885
LKERRKTL	8	Unmodified	_LKERRKTL_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	522.337833	1042.66111	1.4551	0.00076007	4.2592	0.0022248	5.7144	0.0029848	522.3397232740605	106.09	0.1442	106.09	106.03	106.17	0	-0.056044	0.0020703	NaN	2.3027	24	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	162960000	+		18300	10091	8811	8850							0.14148819733804885
LKERRKTL	8	Unmodified	_LKERRKTL_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	522.337833	1042.66111	2.9211	0.0015258	2.3872	0.0012469	5.3083	0.0027727	522.3388464045956	106.06	0.15126	106.12	106.04	106.19	0.05455	-0.029744	0.00011463	NaN	2.3027	20	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	208560000	+		18301	10091	8811	8850							0.14148819733804885
LKERRKTL	8	Unmodified	_LKERRKTL_					0	0	0			REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	REV__nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	522.337833	1042.66111	3.2647	0.0017053	1.7025	0.00088929	4.9672	0.0025946	522.3385735221534	106.05	0.20364	106.2	106.1	106.3	0.15781	0.056286	-0.00060068	NaN	2.3027	38	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1007299999.9999999	+		18302	10091	8811	8850							0.14148819733804885
LKERSRRQKR	10	Unmodified	_LKERSRRQKR_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	678.9221679568291	2	678.918375	1355.8222	1.763	0.0011969	-0.77255	-0.0005245	0.99046	0.00067244	678.9178794034544	96.729	0.19794	96.729	96.602	96.8	0					21	6	4	0	0	0	0.89803	1	40412	40412		1.4819	0.15237	1	16978000	+		18303	10797	8812	8851	21253	21253					0.15851962099714
LKERSRRQKR	10	Unmodified	_LKERSRRQKR_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	678.9208251833916	2	678.918375	1355.8222	2.6522	0.0018006	0.12897	8.7562E-05	2.7811	0.0018882	678.918345455609	96.666	0.21385	96.771	96.664	96.878	0.10499					20	6	4	0	0	0	0.89803	1	40434	40434		1.4819	0.15237	1	15863000	+		18304	10797	8812	8851	21254	21254					0.15851962099714
LKERSRRQKR	10	Unmodified	_LKERSRRQKR_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.9515563845634	3	452.948009	1355.8222	3.4607	0.0015675	2.838	0.0012855	6.2988	0.002853	452.94926963451906	96.279	0.24303	96.681	96.547	96.79	0.40208					23	7	4	0	0	0	0.89803	1	40481	40481		0.62683	0	1	14148000	+		18305	10797	8812	8851	21255	21255					0.15851962099714
LKERSRRQKR	10	Unmodified	_LKERSRRQKR_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	678.918375	1355.8222	1.763	0.0011969	-0.77255	-0.0005245	0.99046	0.00067244	678.9178794034544	96.729	0.19794	96.729	96.602	96.8	0	-0.010587	-0.00058211	NaN	1.4819	21	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16978000	+		18306	10797	8812	8851							0.15851962099714
LKERSRRQKR	10	Unmodified	_LKERSRRQKR_					0	0	0			REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	REV__ENST00000511056.1_1_5:180480165-180482232:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	678.918375	1355.8222	3.5834	0.0024328	-0.24556	-0.00016672	3.3378	0.0022661	678.9164421875823	96.434	0.15485	96.719	96.62	96.774	0.28442	-0.020747	0.00013346	NaN	1.4819	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7148100	+		18307	10797	8812	8851							0.15851962099714
LKERTHIRK	9	Unmodified	_LKERTHIRK_					0	0	0			REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	590.8679077029228	2	590.867289	1179.72002	2.4636	0.0014556	-1.4014	-0.00082805	1.0622	0.0006276	590.8663908332902	90.455	0.65047	90.455	90.193	90.843	0					74	20	5	0	0	0	0.847	1	37832	37832		1.8442	0	1	65063000	+		18308	11903	8813	8852	21256	21256					0.13735296028107769
LKERTHIRK	9	Unmodified	_LKERTHIRK_					0	0	0			REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8690673708916	2	590.867289	1179.72002	5.1291	0.0030306	-1.217	-0.00071911	3.9121	0.0023115	590.8664036490337	89.669	0.52937	90.689	90.397	90.926	1.0199					66	16	5	0	0	0	0.847	2	37716	37716;37842		1.8442	0	1	29315000	+		18309	11903	8813	8852	21257;21258	21257					0.13735296028107769
LKERTHIRK	9	Unmodified	_LKERTHIRK_					0	0	0			REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	REV__ZNF350|p.Q429L|1|0.08|ENSG00000256683|chr19:51965167-51965167|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8690673708916	2	590.867289	1179.72002	4.6529	0.0027492	-1.3997	-0.00082704	3.2532	0.0019222	590.8663164590114	89.378	0.56226	90.782	90.456	91.019	1.4045					62	17	4	0	0	0	0.847	1	37645	37645		1.8442	0	1	22115000	+		18310	11903	8813	8852	21259	21259					0.13735296028107769
LKERVKVRPR	10	Unmodified	_LKERVKVRPR_					0	0	0			REV__nc|ENSG00000197321|O95425-3|SVIL	REV__nc|ENSG00000197321|O95425-3|SVIL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.9191772341728	2	640.917313	1279.82007	2.9826	0.0019116	-0.13844	-8.8726E-05	2.8442	0.0018229	640.9169421537679	105.87	0.16074	106.04	105.95	106.11	0.16679					18	7	3	0	0	0	0.89803	1	45134	45134		1.4819	0.15237	1	286630000	+		18311	14521	8814	8853	21260	21260					0.19135533361918533
LKEVAIYILRR	11	Unmodified	_LKEVAIYILRR_					0	0	0		nc|ENSG00000189195|Q5XKL5-4|BTBD8;nc|ENSG00000189195|Q5XKL5|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	nc|ENSG00000189195|Q5XKL5-4|BTBD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.6275817751884	3	458.625761	1372.85546	3.5088	0.0016092	-1.8833	-0.00086373	1.6255	0.0007455	458.6248475605571	96.255	0.24303	96.657	96.547	96.79	0.40208					21	7	4	0	0	0	1.0366	1	40484	40484		0.40827	0	1	9694700			18312	7958	8815	8854	21261	21261					0.1839415109905076
LKEVKAIK	8	Unmodified	_LKEVKAIK_					0	0	0			REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8141967654228	2	464.813128	927.611703	3.3609	0.0015622	-0.49352	-0.00022939	2.8674	0.0013328	464.8128314377744	106.13	0.19749	106.29	106.19	106.39	0.15781					39	10	5	0	0	0	0.89051	1	45345	45345		2.3027	0	1	1149300000	+		18313	13868	8816	8855	21262	21262					0.1450011172497625
LKEVKAIK	8	Unmodified	_LKEVKAIK_					0	0	0			REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8142578005791	2	464.813128	927.611703	3.3611	0.0015623	-3.6837	-0.0017123	-0.32262	-0.00014996	464.81227107857393	107.71	0.25436	107.87	107.72	107.97	0.15781					50	13	5	0	0	0	0.89051	1	46349	46349		2.3027	0	1	7110199999.999999	+		18314	13868	8816	8855	21263	21263					0.1450011172497625
LKEVKAIK	8	Unmodified	_LKEVKAIK_					0	0	0			REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	REV__ENST00000555873.1_1_14:75601590-75605782:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.8139831423759	2	464.813128	927.611703	3.5434	0.001647	-4.3743	-0.0020332	-0.83094	-0.00038623	464.81188576962654	107.68	0.23774	107.84	107.72	107.96	0.15795					48	12	5	0	0	0	0.89051	1	46282	46282		2.3027	0	1	6081999999.999999	+		18315	13868	8816	8855	21264	21264					0.1450011172497625
LKFCKRLLL	9	Unmodified	_LKFCKRLLL_					0	0	0			REV__ENST00000603821.1_1_4:153245147-153245528:-|nuORF	REV__ENST00000603821.1_1_4:153245147-153245528:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.5786010622978	3	378.579095	1132.71546	-0.77616	-0.00029384	0.44202	0.00016734	-0.33413	-0.0001265	378.57927903930755	32.072	1.2716	32.072	31.789	33.06	0					165	40	5	0	0	0	0.85206	1	13761	13761		0.26902	0.26902	1	67199000	+		18316	14129	8817	8856	21265	21265					0.15440695561005668
LKFFLKLRKRR	11	Unmodified	_LKFFLKLRKRR_					0	0	0		sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	753.3192016482353	2	753.00118	1503.98781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.682	1	98.91	98.41	99.41	0.22776								0	0	0	0.63775	1	41547	41547		0.30703	0	1				18317	16001	8818	8857	21266	21266					0.25597220626491435
LKFRRQYYKKW	11	Unmodified	_LKFRRQYYKKW_					0	0	0		ENSG00000185875|ENST00000376356|THNSL1	ENSG00000185875|ENST00000376356|THNSL1	ENSG00000185875|ENST00000376356|THNSL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	808.4631225466728	2	808.464627	1614.9147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.682	1	99.908	99.408	100.41	0.22545								0	0	0	0.63775	1	41929	41929		0.30703	0.03801	1				18318	4767	8819	8858	21267	21267					0.13184047113236375
LKGCKKPV	8	Unmodified	_LKGCKKPV_					0	0	0		chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7744628787041	2	436.772948	871.531344	2.9076	0.00127	1.5295	0.00066803	4.4371	0.001938	436.7734482008228	78.629	0.37491	79.895	79.724	80.099	1.2668					18	11	2	0	0	0	0.89178	1	33030	33030		0.69038	0	1	982880			18319	161	8820	8859	21268	21268					0.0904392713028983
LKGCKKPV	8	Unmodified	_LKGCKKPV_					0	0	0		chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	chr1:156274686-156277067|205|11.51|0.64|4.17|-|2|SMG5,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	436.772948	871.531344	1.9441	0.00084915	2.1192	0.00092561	4.0634	0.0017748	436.7735725383019	78.122	0.40179	79.874	79.684	80.086	1.7514	-0.010813	0.00027665	NaN	0.69038	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	696340			18320	161	8820	8859							0.0904392713028983
LKGCSRWC	8	Unmodified	_LKGCSRWC_					0	0	0			REV__chr19:41120496-41121957|138|16.12|0.42|5.26|+|0|CYP2F1,CYP2F1|1	REV__chr19:41120496-41121957|138|16.12|0.42|5.26|+|0|CYP2F1,CYP2F1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.1959411501884	3	318.154569	951.441877	0.6382	0.00020305	-1.4709	-0.00046796	-0.83266	-0.00026492	318.1545191284496	54.677	0.31685	56.645	56.583	56.9	1.9684					15	10	2	0	0	0	2.3239	1	22964	22964		3.9444	0	1	1402200	+		18321	8289	8821	8860	21269	21269					-0.03578650820736584
LKGDDLQAIKK	11	Unmodified	_LKGDDLQAIKK_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2466003298759	3	410.246839	1227.71869	-0.28691	-0.0001177	-0.06641	-2.7245E-05	-0.35332	-0.00014495	410.2470078517593	13.777	0.15484	14.503	14.411	14.565	0.72639					13	4	4	0	0	0	0.075628	1	5711	5711		61.165	34.036	1	1727400			18322	1161	8822	8861	21270	21270					0.11393617148678459
LKGDDLQAIKK	11	Unmodified	_LKGDDLQAIKK_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2468139529228	3	410.246839	1227.71869	0.077419	3.1761E-05	-1.2151	-0.00049848	-1.1376	-0.00046672	410.2465223890443	13.642	0.15108	14.47	14.365	14.516	0.82789					10	4	3	0	0	0	0.039817	1	5647	5647		70.345	44.224	1	1903300			18323	1161	8822	8861	21271	21271					0.11393617148678459
LKGFLIVLY	9	Unmodified	_LKGFLIVLY_					0	0	0			REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3417846560478	2	533.338978	1064.6634	2.9772	0.0015879	1.893	0.0010096	4.8702	0.0025975	533.3400474285888	82.672	0.6506	84.342	84.017	84.668	1.67					65	20	5	0	0	0	0.84963	1	34747	34747		0.6015	0	1	86791000	+		18324	15839	8823	8862	21272	21272					0.133658554188969
LKGKPVIV	8	Unmodified	_LKGKPVIV_					0	0	0		tr|A0A7D6ZVW5|A0A7D6ZVW5_9CLOTDNApolymeraseIVOS=ClostridiumintestinaleOX=36845GN=dinBPE=3SV=1	tr|A0A7D6ZVW5|A0A7D6ZVW5_9CLOTDNApolymeraseIVOS=ClostridiumintestinaleOX=36845GN=dinBPE=3SV=1	tr|A0A7D6ZVW5|A0A7D6ZVW5_9CLOTDNApolymeraseIVOS=ClostridiumintestinaleOX=36845GN=dinBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2981445193291	2	427.297114	852.579674	0.46904	0.00020042	1.8941	0.00080933	2.3631	0.0010097	427.2975567564471	109.12	0.81297	109.12	108.88	109.69	0					72	36	3	0	0	0	0.89008	1	47328	47328		2.5775	0	1	22330000			18325	17158	8824	8863	21273	21273					0.14748744041855844
LKGQLLDIQV	10	Unmodified	_LKGQLLDIQV_					0	0	0		ULBP1|p.K147Tfs*26|1|0.05|ENSG00000111981|chr6:149969174-149969175|-/CCACACAAAAC|frameshift_variant;ENSG00000111981|ENST00000229708|ULBP1	ULBP1|p.K147Tfs*26|1|0.05|ENSG00000111981|chr6:149969174-149969175|-/CCACACAAAAC|frameshift_variant	ULBP1|p.K147Tfs*26|1|0.05|ENSG00000111981|chr6:149969174-149969175|-/CCACACAAAAC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2345153689384	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.165	1	84.426	83.926	84.926	0.26083								0	0	0	0.66141	1	35203	35203		2.086	0	1				18326	1764	8825	8864	21274	21274					0.11794847091277916
LKGVIKHHI	9	Unmodified	_LKGVIKHHI_					0	0	0			REV__nc|ENSG00000173809|Q587J7|TDRD12	REV__nc|ENSG00000173809|Q587J7|TDRD12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1044.668261706829	1	1044.66766	1043.66038	4.3066	0.004499	-4.3114	-0.004504	-0.0047394	-4.9511E-06	1044.6626999485225	108.87	0.18167	109.02	108.93	109.12	0.1548					19	8	3	0	0	0	0.84963	1	47093	47093		0.6015	0.076735	1	17739000	+		18327	8287	8826	8865	21275	21275					0.1403002508473037
LKGVIKHHI	9	Unmodified	_LKGVIKHHI_					0	0	0			REV__nc|ENSG00000173809|Q587J7|TDRD12	REV__nc|ENSG00000173809|Q587J7|TDRD12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1044.66766	1043.66038	4.3066	0.004499	-4.3114	-0.004504	-0.0047394	-4.9511E-06	1044.6626999485225	108.87	0.18167	109.02	108.93	109.12	0.1548	-0.028639	-0.0014896	NaN	0.6015	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17739000	+		18328	8287	8826	8865							0.1403002508473037
LKGWSCCR	8	Unmodified	_LKGWSCCR_					0	0	0		nc|ENSG00000147166|Q9UKP3-2|ITGB1BP2;ENSG00000147166|ENST00000373829|ITGB1BP2	nc|ENSG00000147166|Q9UKP3-2|ITGB1BP2	nc|ENSG00000147166|Q9UKP3-2|ITGB1BP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	476.7307922244072	2	476.728215	951.441877	2.2386	0.0010672	2.5209	0.0012018	4.7596	0.002269	476.7291340693075	76.327	0.55006	76.327	76.041	76.592	0					45	17	3	0	0	0	0.89161	1	31727	31727		2.0598	0	1	26019000			18329	3175	8827	8866	21276	21276					-0.03578650820736584
LKHKLLRE	8	Unmodified	_LKHKLLRE_					0	0	0			REV__ENSG00000162654|ENST00000355754|GBP4	REV__ENSG00000162654|ENST00000355754|GBP4	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2268249392509	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.004	1	62.004	61.504	62.504	0								0	0	0	1.0178	1	25850	25850		0.45834	0	1		+		18330	10653	8828	8867	21277	21277					0.13889721222130902
LKIFKQTF	8	Unmodified	_LKIFKQTF_					0	0	0			REV__tr|A0A553ST15|A0A553ST15_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04070PE=4SV=1	REV__tr|A0A553ST15|A0A553ST15_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2120239138603	3	342.211177	1023.6117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.11	1	19.11	18.61	19.61	0								0	0	0	1.0178	1	7940	7940		0.40072	0	1		+		18331	15225	8829	8868	21278	21278					0.10084111724995637
LKILKLSN	8	Unmodified	_LKILKLSN_					0	0	0		ENSG00000167207|ENST00000647318|NOD2;nc|ENSG00000167207|Q9HC29|NOD2;NKD1-NOD2|1|fusion	ENSG00000167207|ENST00000647318|NOD2	ENSG00000167207|ENST00000647318|NOD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.8141052126884	2	464.813128	927.611703	3.4286	0.0015937	-1.8287	-0.00085002	1.5999	0.00074364	464.81262542725875	107.73	0.23581	107.78	107.66	107.89	0.052452					46	12	5	0	0	0	0.89178	1	46177	46177		0.69038	0	1	1426800000			18332	3956	8830	8869	21279	21279					0.1450011172497625
LKKAKTLLLVL	11	Unmodified	_LKKAKTLLLVL_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant;SACS|p.L2402Tfs*7|1|0.04|ENSG00000151835|chr13:23336672-23336673|-/T|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4442626833916	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.76	1	106.81	106.31	107.31	0.052452								0	0	0	0.63775	1	45550	45550		1.3295	0.13619	1				18333	3303	8831	8870	21280	21280					0.25910008878304325
LKKCLRFLF	9	Unmodified	_LKKCLRFLF_					0	0	0			REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3583862185478	2	584.357179	1166.69981	3.3962	0.0019846	-1.9024	-0.0011117	1.4938	0.00087289	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.75267	1	31195	31195		5.2307	1.6342	1	5910500	+		18334	14406	8832	8871	21281	21281					0.12312409043943262
LKKGGAQE	8	Unmodified	_LKKGGAQE_					0	0	0			REV__nc|ENSG00000196277|Q14831-5|GRM7	REV__nc|ENSG00000196277|Q14831-5|GRM7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	830.4723998904228	1	830.473043	829.465767	1.2384	0.0010284	-1.6278	-0.0013519	-0.38948	-0.00032345	830.4715796022638	103.44	0.075989	103.44	103.41	103.48	0					7	3	3	0	0	0	0.89051	1	43419	43419		2.3027	0	1	69759000	+		18335	11624	8833	8872	21282	21282					0.04421229208935529
LKKGGAQE	8	Unmodified	_LKKGGAQE_					0	0	0			REV__nc|ENSG00000196277|Q14831-5|GRM7	REV__nc|ENSG00000196277|Q14831-5|GRM7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	830.473043	829.465767	1.2384	0.0010284	-1.6278	-0.0013519	-0.38948	-0.00032345	830.4715796022638	103.44	0.075989	103.44	103.41	103.48	0	-0.066885	0.00050032	NaN	2.3027	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	69759000	+		18336	11624	8833	8872							0.04421229208935529
LKKIKTTP	8	Unmodified	_LKKIKTTP_					0	0	0			REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	928.6205932497978	1	928.618979	927.611703	2.8005	0.0026006	-0.14289	-0.00013269	2.6576	0.0024679	928.6182760737668	106.15	0.16299	106.21	106.12	106.29	0.05455					20	7	4	0	0	0	0.89178	1	45158	45158		0.69038	0	1	69554000	+		18337	11713	8834	8873	21283	21283					0.14500111724964881
LKKIKTTP	8	Unmodified	_LKKIKTTP_					0	0	0			REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.6194946169853	1	928.618979	927.611703	3.3358	0.0030977	-0.91315	-0.00084797	2.4227	0.0022498	928.6177934793749	106.13	0.17796	106.29	106.19	106.37	0.15781					32	9	5	0	0	0	0.89178	1	45348	45348		0.69038	0	1	712420000	+		18338	11713	8834	8873	21284	21284					0.14500111724964881
LKKIKTTP	8	Unmodified	_LKKIKTTP_					0	0	0			REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	REV__nc|ENSG00000198482|Q8N4W9-2|ZNF808	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.6202880740166	1	928.618979	927.611703	3.4021	0.0031592	-1.655	-0.0015368	1.7471	0.0016224	928.617116777194	106.1	0.177	106.26	106.17	106.34	0.16174					34	9	5	0	0	0	0.89178	1	45277	45277		0.69038	0	1	532650000	+		18339	11713	8834	8873	21285	21285					0.14500111724964881
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.8411437869072	2	508.839342	1015.66413	2.9709	0.0015117	-0.32602	-0.00016589	2.6449	0.0013458	508.83908141419704	107.62	0.24316	107.67	107.56	107.8	0.052444					45	12	5	0	0	0	0.85403	2	46052	46052;46126		0	0	1	535890000			18340	16782	8835	8874	21286;21287	21286					0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1016.673388659954	1	1016.67141	1015.66413	3.0771	0.0031284	-0.83582	-0.00084976	2.2413	0.0022786	1016.6704159315907	107.62	0.22569	107.67	107.56	107.79	0.052452					39	11	5	0	0	0	0.85403	1	46135	46135		0	0	1	283000000			18341	16782	8835	8874	21288	21288					0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.674243152142	1	1016.67141	1015.66413	2.538	0.0025803	-0.80108	-0.00081443	1.7369	0.0017659	1016.6705721545205	106.08	0.15865	106.24	106.16	106.32	0.15781					26	8	4	0	0	0	0.85403	1	45321	45321		0	0	1	215220000			18342	16782	8835	8874	21289	21289					0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.673388659954	1	1016.67141	1015.66413	2.538	0.0025803	-1.0462	-0.0010637	1.4917	0.0015166	1016.6701769518633	107.59	0.22151	107.74	107.64	107.86	0.15781					43	11	5	0	0	0	0.85403	1	46282	46282		0	0	1	881770000			18343	16782	8835	8874	21290	21290					0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1016.67141	1015.66413	1.2388	0.0012594	-0.18986	-0.00019303	1.0489	0.0010664	1016.6732234245701	106.16	0.1203	106.16	106.07	106.19	0	-0.031579	0.0012621	NaN	0	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13520000			18344	16782	8835	8874							0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1016.67141	1015.66413	3.0758	0.0031271	-1.3436	-0.001366	1.7323	0.0017611	1016.6706698916977	106.1	0.10065	106.16	106.1	106.21	0.05455	-0.03434	8.912E-05	NaN	0	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24163000			18345	16782	8835	8874							0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1016.67141	1015.66413	3.1803	0.0032333	-1.9634	-0.0019962	1.2169	0.0012371	1016.6692873651737	106.05	0.16043	106.21	106.13	106.29	0.16174	0.019786	-0.00054106	NaN	0	26	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	180460000			18346	16782	8835	8874							0.15692650067921932
LKKISIITT	9	Unmodified	_LKKISIITT_					0	0	0		tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	tr|A0A7D6VQ58|A0A7D6VQ58_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18895PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.839342	1015.66413	3.4344	0.0017476	0.21954	0.00011171	3.6539	0.0018593	509.3411987393319	107.33	0.091423	107.48	107.45	107.54	0.15796	-0.12037	1.7381E-05	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2219100			18347	16782	8835	8874							0.15692650067921932
LKKKAKAA	8	Unmodified	_LKKKAKAA_					0	0	0		nc|ENSG00000137727|Q9P2F6-4|ARHGAP20;nc|ENSG00000137727|Q9P2F6-2|ARHGAP20;nc|ENSG00000137727|Q9P2F6-3|ARHGAP20;ENSG00000137727|ENST00000683387|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.3014099001884	2	429.300188	856.585822	3.108	0.0013342	-1.173	-0.00050359	1.9349	0.00083066	429.29957234890713	107.83	0.21571	107.88	107.77	107.99	0.052452					34	11	4	0	0	0	0.89198	2	46194	46194;46270		0	0	1	498380000			18348	2785	8836	8875	21291;21292	21291					0.15179262273352379
LKKKKKKKK	9	Unmodified	_LKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF;AluJb_dup51192|chr7:107770157-107770196:-|1.9495540912656453|0.0004798219220502|11.99|429.0|2|2|sense;Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|60|2|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|3|1|sense;AluSz_dup66644|chr12:32351204-32351515:+|1.092123951942744|0.2135338694925806|2.35|429.0|11|3|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|4|1|sense;ENST00000368679.8_1_10:127702855-127703017:-|nuORF;ENST00000378289.8_1_10:14940166-14940367:-|nuORF;ENST00000495836.1_1_2:69771529-69870271:-|nuORF;nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72;ENST00000344423.9_1_8:28205640-28205820:-|nuORF;AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|3|1|sense;AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|11|3|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|14|3|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|3|1|sense;AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|7|2|sense	ENST00000522197.1_1_8:122652185-122654912:+|nuORF;nc|ENSG00000174780|O76094-2|SRP72;ENST00000344423.9_1_8:28205640-28205820:-|nuORF;REV__ENSG00000183354|ENST00000399933|KIAA2026;AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|3|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|1|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	386.2921325564384	3	386.292054	1155.85433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.99	1	103.17	102.67	103.67	0.18066								0	0	0	0.42693	1	43340	43340		0	0	1				18349	7047;4341;5958;11390;37;40	8837	8876	21293	21293					0.28263981520808557
LKKKKKKKKG	10	Unmodified	_LKKKKKKKKG_					0	0	0		nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72	nc|ENSG00000174780|O76094-2|SRP72	nc|ENSG00000174780|O76094-2|SRP72	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.3238403201103	2	607.445175	1212.8758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.95	1	106.95	106.45	107.45	0								0	0	0	0.66264	1	45736	45736		0	0	1				18350	4341	8838	8877	21294	21294					0.2778736654952354
LKKKKKKKKG	10	Unmodified	_LKKKKKKKKG_					0	0	0		nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72	nc|ENSG00000174780|O76094-2|SRP72	nc|ENSG00000174780|O76094-2|SRP72	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2999450564384	3	405.299209	1212.8758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.11	1	106.17	105.67	106.67	0.05455								0	0	0	0.66264	1	45141	45141		0	0	1				18351	4341	8838	8877	21295	21295					0.2778736654952354
LKKKKKKKKG	10	Unmodified	_LKKKKKKKKG_					0	0	0		nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72	nc|ENSG00000174780|O76094-2|SRP72	nc|ENSG00000174780|O76094-2|SRP72	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.3003723025322	3	405.299209	1212.8758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.51	1	108.67	108.17	109.17	0.15898								0	0	0	0.66264	1	46934	46934		0	0	1				18352	4341	8838	8877	21296	21296					0.2778736654952354
LKKKKKKKKG	10	Unmodified	_LKKKKKKKKG_					0	0	0		nc|ENSG00000174780|O76094-2|SRP72;ENSG00000174780|ENST00000642900|SRP72	nc|ENSG00000174780|O76094-2|SRP72	nc|ENSG00000174780|O76094-2|SRP72	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.3000976443291	3	405.299209	1212.8758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.48	1	108.64	108.14	109.14	0.1548								0	0	0	0.66264	1	46841	46841		0	0	1				18353	4341	8838	8877	21297	21297					0.2778736654952354
LKKKKTTIK	9	Unmodified	_LKKKKTTIK_					0	0	0		ENSG00000067715|ENST00000261205|SYT1;nc|ENSG00000134207|Q5T7P8-2|SYT6;ENSG00000134207|ENST00000610222|SYT6	ENSG00000067715|ENST00000261205|SYT1	ENSG00000067715|ENST00000261205|SYT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2563049197197	3	363.256898	1086.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.44	1	100.62	100.12	101.12	0.18047								0	0	0	0.42693	1	42264	42264		0	0	1				18354	826	8839	8878	21298	21298					0.2089602060452762
LKKKKTTIK	9	Unmodified	_LKKKKTTIK_					0	0	0		ENSG00000067715|ENST00000261205|SYT1;nc|ENSG00000134207|Q5T7P8-2|SYT6;ENSG00000134207|ENST00000610222|SYT6	ENSG00000067715|ENST00000261205|SYT1	ENSG00000067715|ENST00000261205|SYT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2560912966728	3	363.256898	1086.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.006	1	99.231	98.731	99.731	0.22545								0	0	0	0.42693	1	41661	41661		0	0	1				18355	826	8839	8878	21299	21299					0.2089602060452762
LKKLIKIRI	9	Unmodified	_LKKLIKIRI_					0	0	0			REV__tr|A0A7D6ZUM3|A0A7D6ZUM3_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00730PE=4SV=1	REV__tr|A0A7D6ZUM3|A0A7D6ZUM3_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00730PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9160644412041	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.89	1	105.89	105.39	106.39	0								0	0	0	0.42693	1	45056	45056		0.52476	0	1		+		18356	15723	8840	8879	21300	21300					0.2599289025520193
LKKLIKIRI	9	Unmodified	_LKKLIKIRI_					0	0	0			REV__tr|A0A7D6ZUM3|A0A7D6ZUM3_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00730PE=4SV=1	REV__tr|A0A7D6ZUM3|A0A7D6ZUM3_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00730PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9158813357353	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.64	1	108.8	108.3	109.3	0.1548								0	0	0	0.42693	1	46951	46951		0.52476	0	1		+		18357	15723	8840	8879	21301	21301					0.2599289025520193
LKKLRKEHVF	10	Unmodified	_LKKLRKEHVF_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2771484255791	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.117	1	87.117	86.617	87.617	0								0	0	0	0.66237	1	36367	36367		0.15932	0.064481	1				18358	3427	8841	8880	21302	21302					0.16649612756100396
LKKLRKEHVF	10	Unmodified	_LKKLRKEHVF_					0	0	0		ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	ENSG00000155754|ENST00000439140|C2CD6	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2766601443291	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.843	1	87.087	86.587	87.587	0.24387								0	0	0	0.66237	1	36368	36368		0.15932	0.01943	1				18359	3427	8841	8880	21303	21303					0.16649612756100396
LKKPAAHKVL	10	Unmodified	_LKKPAAHKVL_					0	0	0		tr|A0A553SL62|A0A553SL62_NIACIHeptaprenyldiphosphatesynthasecomponentIIOS=NialliacirculansOX=1397GN=hepTPE=3SV=1	tr|A0A553SL62|A0A553SL62_NIACIHeptaprenyldiphosphatesynthasecomponentIIOS=NialliacirculansOX=1397GN=hepTPE=3SV=1	tr|A0A553SL62|A0A553SL62_NIACIHeptaprenyldiphosphatesynthasecomponentIIOS=NialliacirculansOX=1397GN=hepTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8661987185478	2	552.866226	1103.7179	3.1537	0.0017436	-2.6438	-0.0014617	0.50988	0.0002819	552.8647293780117	107.51	0.23145	107.67	107.52	107.75	0.15795					44	11	5	0	0	0	0.89803	1	46237	46237		1.6526	1.0511	1	1446200000			18360	16322	8842	8881	21304	21304					0.170188672903123
LKKQLKLHRK	10	Unmodified	_LKKQLKLHRK_					0	0	0		nc|ENSG00000188554|Q14596-2|NBR1;ENSG00000188554|ENST00000590996|NBR1	nc|ENSG00000188554|Q14596-2|NBR1	nc|ENSG00000188554|Q14596-2|NBR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	646.4371826052666	2	646.437881	1290.86121	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.58	1	104.74	104.24	105.24	0.16055								0	0	0	0.6624	1	44336	44336		0.40072	0.093686	1				18361	4867	8843	8882	21305	21305					0.22741294401384948
LKKSQSLVL	9	Unmodified	_LKKSQSLVL_					0	0	0			REV__ENSG00000168758|ENST00000305476|SEMA4C	REV__ENSG00000168758|ENST00000305476|SEMA4C	MSMS	GG20161007_CRH_Patient100_W632_01	3	339.2214233279228	3	339.221853	1014.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.775	1	33.056	32.556	33.556	1.2813								0	0	0	0.42693	1	13329	13329		2.4985	0	1		+		18362	10921	8844	8883	21306	21306					0.1369947940813745
LKKTFEVL	8	Unmodified	_LKKTFEVL_					0	0	0			REV__nc|ENSG00000012504|Q96RI1-5|NR1H4	REV__nc|ENSG00000012504|Q96RI1-5|NR1H4	MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3049194216728	2	489.305136	976.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.34	1	104.51	104.01	105.01	0.1731								0	0	0	1.0178	1	44115	44115		2.5775	0	1		+		18363	8538	8845	8884	21307	21307					0.10648405488075241
LKKTPPAL	8	Unmodified	_LKKTPPAL_					0	0	0			REV__ENSG00000164754|ENST00000297338|RAD21	REV__ENSG00000164754|ENST00000297338|RAD21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2878600955009	2	434.286746	866.558939	3.305	0.0014353	-0.24076	-0.00010456	3.0643	0.0013308	434.2866951006377	108.22	0.52005	108.38	108.29	108.81	0.15781					49	29	3	0	0	0	0.89178	1	46805	46805		0.69038	0	1	46856000	+		18364	10748	8846	8885	21308	21308					0.12032153662153178
LKKTPPAL	8	Unmodified	_LKKTPPAL_					0	0	0			REV__ENSG00000164754|ENST00000297338|RAD21	REV__ENSG00000164754|ENST00000297338|RAD21	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	434.286746	866.558939	3.3104	0.0014377	0.20858	9.0582E-05	3.519	0.0015282	434.2870122907805	108.28	0.118	108.43	108.38	108.5	0.15796	0.02604	0.00025014	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5628000	+		18365	10748	8846	8885							0.12032153662153178
LKKTVARAAE	10	Unmodified	_LKKTVARAAE_					0	0	0		tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	tr|A0A553SMY5|A0A553SMY5_NIACIGlutaminesynthetaseOS=NialliacirculansOX=1397GN=CEQ21_23430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.8922912478447	3	362.892507	1085.65569	-2.1546	-0.0007819	2.6087	0.00094668	0.45407	0.00016478	362.8932440374939	10.107	0.63385	10.107	9.5802	10.214	0					58	20	4	0	0	0	0.57898	1	4171	4171		23.964	2.1647	1	6239000			18366	16401	8847	8886	21309	21309					0.11629096151295926
LKKVPVMPK	9	Unmodified	_LKKVPVMPK_					0	0	0		ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	ENSG00000282815|ENST00000695840|TEX13C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.5594055056572	3	347.228062	1038.66236	1.4329	0.00049756	-0.93993	-0.00032637	0.49301	0.00017119	347.22773645034624	66.936	0.18297	67.261	67.158	67.341	0.32449					7	5	2	0	0	0	0.11909	1	28005	28005		0.96228	0.72643	1	797230			18367	5484	8848	8887	21310	21310					0.14457317778351353
LKKWPKLKSKK	11	Unmodified	_LKKWPKLKSKK_					0	0	0		ENSG00000100249|ENST00000216071|C22orf31	ENSG00000100249|ENST00000216071|C22orf31	ENSG00000100249|ENST00000216071|C22orf31	MSMS	GG20161007_CRH_Patient100_W632_02	4	692.4628173708916	2	692.463564	1382.91258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.32	109.82	110.82	0.15228								0	0	0	0.63775	1	47785	47785		0	0	1				18368	1258	8849	8888	21311	21311					0.23643618375399456
LKKYKIFWHNQ	11	Unmodified	_LKKYKIFWHNQ_					0	0	0		ENST00000465018.1_1_13:21442666-21476877:-|nuORF	ENST00000465018.1_1_13:21442666-21476877:-|nuORF	ENST00000465018.1_1_13:21442666-21476877:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2881957888603	3	502.285628	1503.83505	1.9383	0.00097359	0.075764	3.8055E-05	2.0141	0.0010116	502.2855731697603	46.942	0.5845	46.942	46.725	47.309	0					39	18	3	0	0	0	1.0395	1	19681	19681		0.08335	0	1	2407600			18369	6695	8850	8889	21312	21312					0.10328980439271618
LKKYKIFWHNQ	11	Unmodified	_LKKYKIFWHNQ_					0	0	0		ENST00000465018.1_1_13:21442666-21476877:-|nuORF	ENST00000465018.1_1_13:21442666-21476877:-|nuORF	ENST00000465018.1_1_13:21442666-21476877:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.6204101443291	3	502.285628	1503.83505	2.2641	0.0011372	-0.55727	-0.00027991	1.7068	0.0008573	502.2851767324735	46.369	0.54259	46.698	46.479	47.022	0.32899					51	18	4	0	0	0	1.0395	1	19536	19536		0.08335	0	1	2684000			18370	6695	8850	8889	21313	21313					0.10328980439271618
LKLCDRFSI	9	Unmodified	_LKLCDRFSI_					0	0	0			REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	REV__ENST00000358154.7_1_16:21629208-21629286:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.5394775271416	3	365.539077	1093.5954	0.64208	0.0002347	0.53754	0.00019649	1.1796	0.0004312	365.5392118914454	24.976	0.40089	25.228	25.027	25.428	0.25197					39	12	4	0	0	0	0.35546	1	10458	10458		22.658	6.509	1	3220200	+		18371	12568	8851	8890	21314	21314					0.05234662496582132
LKLELRRKET	10	Unmodified	_LKLELRRKET_					0	0	0		ENSG00000126856|ENST00000449207|PRDM7	ENSG00000126856|ENST00000449207|PRDM7	ENSG00000126856|ENST00000449207|PRDM7	MSMS	GG20161007_CRH_Patient100_A02_01	1	643.4003173708916	2	643.401161	1284.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.333	1	97.333	96.833	97.833	0								0	0	0	0.66176	1	40692	40692		1.4819	0	1				18372	2321	8852	8891	21315	21315					0.1567670116824047
LKLFLLVP	8	Unmodified	_LKLFLLVP_					0	0	0			REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	942.6387206912041	1	942.638652	941.631375	1.158	0.0010915	0.097163	9.1589E-05	1.2551	0.0011831	942.6376771551336	109.67	0.36755	109.67	109.48	109.84	0					27	14	2	0	0	0	0.89176	1	47473	47473		0.79363	0	1	4499000	+		18373	13179	8853	8892	21316	21316					0.15822487735761115
LKLFLLVP	8	Unmodified	_LKLFLLVP_					0	0	0			REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	942.638652	941.631375	1.158	0.0010915	0.097163	9.1589E-05	1.2551	0.0011831	942.6376771551336	109.67	0.36755	109.67	109.48	109.84	0	-0.028102	-0.0013371	NaN	0.79363	27	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4499000	+		18374	13179	8853	8892							0.15822487735761115
LKLFLLVP	8	Unmodified	_LKLFLLVP_					0	0	0			REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	942.638652	941.631375	2.7882	0.0026283	1.7649	0.0016637	4.5532	0.004292	942.6391118403727	109.66	0.39775	109.7	109.5	109.9	0.048843	0.003251	0.00023499	NaN	0.79363	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4930100	+		18375	13179	8853	8892							0.15822487735761115
LKLFLLVP	8	Unmodified	_LKLFLLVP_					0	0	0			REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	942.638652	941.631375	2.9765	0.0028058	2.7527	0.0025948	5.7292	0.0054006	942.6401042426721	109.56	0.4453	109.72	109.54	109.98	0.15898	0.018509	0.0011661	NaN	0.79363	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5899300	+		18376	13179	8853	8892							0.15822487735761115
LKLFLLVP	8	Unmodified	_LKLFLLVP_					0	0	0			REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	REV__ENST00000458537.7_1_3:170078288-170078366:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	942.638652	941.631375	3.4484	0.0032506	4.693	0.0044238	8.1413	0.0076743	942.6452349867503	109.55	0.22974	109.71	109.6	109.83	0.1548	0.0063424	0.0029951	NaN	0.79363	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4304200	+		18377	13179	8853	8892							0.15822487735761115
LKLFNERILL	10	Unmodified	_LKLFNERILL_					0	0	0			REV__tr|A0A553SML7|A0A553SML7_NIACIUDP-N-acetylglucosamine--LPSN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=CEQ21_22850PE=3SV=1	REV__tr|A0A553SML7|A0A553SML7_NIACIUDP-N-acetylglucosamine--LPSN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=CEQ21_22850PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.8982421755791	2	629.897723	1257.78089	2.7441	0.0017285	-3.4061	-0.0021455	-0.66199	-0.00041699	629.8957885499747	107.36	0.26962	107.52	107.33	107.6	0.15796					35	13	4	0	0	0	0.88579	1	46100	46100		2.9952	0.26005	1	72146000	+		18378	15026	8854	8893	21317	21317					0.1623138828770152
LKLHKKHL	8	Unmodified	_LKLHKKHL_					0	0	0		ENSG00000148429|ENST00000609104|USP6NL;nc|ENSG00000148429|Q92738-2|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8407165408134	2	508.840011	1015.66547	3.5127	0.0017874	-3.2218	-0.0016394	0.29096	0.00014805	508.838463062506	107.6	0.24062	107.76	107.62	107.86	0.15781					51	12	5	0	0	0	0.89178	1	46279	46279		0.69038	0	1	2758100000			18379	3211	8855	8894	21318	21318					0.1582632894735525
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2524902224541	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.38	1	110.43	109.93	110.93	0.047043								0	0	0	0.42693	1	47621	47621		0	0	1				18380	16345	8856	8895	21319	21319					0.19120982078061388
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2521850466728	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.47	1	110.51	110.01	111.01	0.047043								0	0	0	0.42693	1	47655	47655		0	0	1				18381	16345	8856	8895	21320	21320					0.19120982078061388
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525207400322	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.56	1	110.61	110.11	111.11	0.047043								0	0	0	0.42693	1	47688	47688		0	0	1				18382	16345	8856	8895	21321	21321					0.19120982078061388
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525512576103	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.39	1	111.43	110.93	111.93	0.047043								0	0	0	0.42693	1	48027	48027		0	0	1				18383	16345	8856	8895	21322	21322					0.19120982078061388
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2523071169853	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.24	1	110.4	109.9	110.9	0.16133								0	0	0	0.42693	1	47895	47895		0	0	1				18384	16345	8856	8895	21323	21323					0.19120982078061388
LKLKKMKKA	9	Unmodified	_LKLKKMKKA_					0	0	0		tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	tr|A0A553SLP9|A0A553SLP9_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21075PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2521240115166	3	363.250979	1086.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.681	1	87.228	86.728	87.728	1.547								0	0	0	0.42693	1	36039	36039		0	0	1				18385	16345	8856	8895	21324	21324					0.19120982078061388
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.3487731814384	2	502.349346	1002.68414	1.2129	0.00060927	-0.54206	-0.00027231	0.67079	0.00033697	502.34893152647953	109.51	0.57406	109.51	109.33	109.9	0					58	23	3	0	0	0	0.89198	2	47377	47377;47435		0	0	1	16452000	+		18386	14541	8857	8896	21325;21326	21325					0.18290445798538713
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.3497802615166	2	502.349346	1002.68414	3.2583	0.0016368	-2.441	-0.0012262	0.8173	0.00041057	502.3475378312722	109.57	0.70442	109.62	109.22	109.93	0.048843					56	27	3	0	0	0	0.89198	3	47224	47224;47288;47345		0	0	1	10417000	+		18387	14541	8857	8896	21327;21328;21329	21327					0.18290445798538713
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3495361208916	2	502.349346	1002.68414	3.2699	0.0016426	-0.8429	-0.00042343	2.427	0.0012192	502.3486597400175	109.48	0.46558	109.64	109.52	109.98	0.15898					43	17	3	0	0	0	0.89198	2	47534	47534;47599		0	0	1	13560000	+		18388	14541	8857	8896	21330;21331	21330					0.18290445798538713
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	502.349346	1002.68414	1.2129	0.00060927	-0.54206	-0.00027231	0.67079	0.00033697	502.34893152647953	109.51	0.57406	109.51	109.33	109.9	0	-0.077683	0.00064114	NaN	0	58	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16452000	+		18389	14541	8857	8896							0.18290445798538713
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	502.349346	1002.68414	3.2583	0.0016368	-2.441	-0.0012262	0.8173	0.00041057	502.3475378312722	109.57	0.70442	109.62	109.22	109.93	0.048843	0.029207	-0.0012667	NaN	0	56	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10417000	+		18390	14541	8857	8896							0.18290445798538713
LKLLKLYL	8	Unmodified	_LKLLKLYL_					0	0	0			REV__nc|ENSG00000223519|B7ZC32|KIF28P	REV__nc|ENSG00000223519|B7ZC32|KIF28P	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.349346	1002.68414	3.2699	0.0016426	-0.8429	-0.00042343	2.427	0.0012192	502.3486597400175	109.48	0.46558	109.64	109.52	109.98	0.15898	0.048475	0.00033889	NaN	0	43	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13560000	+		18391	14541	8857	8896							0.18290445798538713
LKLLVTPLR	9	Unmodified	_LKLLVTPLR_					0	0	0			REV__ENSG00000177971|ENST00000403490|IMP3	REV__ENSG00000177971|ENST00000403490|IMP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	351.2434570193291	3	351.57786	1051.71175	-0.43124	-0.00015161	0.37202	0.0001308	-0.059214	-2.0818E-05	351.5779727206424	20.136	0.46325	21.261	20.892	21.355	1.1254					23	14	2	0	0	0	0.11916	1	8326	8326		0.96228	0	1	403290	+		18392	11231	8858	8897	21332	21332					0.1879634905878902
LKLLVTPLR	9	Unmodified	_LKLLVTPLR_					0	0	0			REV__ENSG00000177971|ENST00000403490|IMP3	REV__ENSG00000177971|ENST00000403490|IMP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.4614745974541	2	526.863152	1051.71175	0.51456	0.0002711	0.2854	0.00015037	0.79996	0.00042147	526.8630781198389	20.468	0.12191	22.043	21.997	22.119	1.5748					5	3	2	0	0	0	0.11851	1	8510	8510		3.9444	0	1	837400	+		18393	11231	8858	8897	21333	21333					0.1879634905878902
LKLNRGCAL	9	Unmodified	_LKLNRGCAL_					0	0	0			REV__nc|ENSG00000166130|Q70UQ0-3|IKBIP	REV__nc|ENSG00000166130|Q70UQ0-3|IKBIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2910339236259	2	494.292037	986.56952	2.1173	0.0010466	-3.1201	-0.0015422	-1.0028	-0.00049565	494.29043595208395	45.525	0.28775	46.9	46.735	47.023	1.3751					19	8	3	0	0	0	0.44535	1	19095	19095		18.135	1.0221	1	1445500	+		18394	14477	8859	8898	21334	21334					0.07569813044960938
LKLRGLKRPE	10	Unmodified	_LKLRGLKRPE_					0	0	0			REV__ENST00000440088.5_1_7:77288286-77288505:-|nuORF	REV__ENST00000440088.5_1_7:77288286-77288505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1995117068291	4	303.200208	1208.77173	-2.6672	-0.00080869	-0.37655	-0.00011417	-3.0437	-0.00092286	303.20008450280005	31.651	1.3899	31.651	30.928	32.318	0					148	44	4	0	0	0	0.89803	1	13265	13265		1.3296	0.31607	1	5737000	+		18395	13078	8860	8899	21335	21335					0.17569039722025082
LKLRGLKRPE	10	Unmodified	_LKLRGLKRPE_					0	0	0			REV__ENST00000440088.5_1_7:77288286-77288505:-|nuORF	REV__ENST00000440088.5_1_7:77288286-77288505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1985656619072	4	303.200208	1208.77173	-2.5534	-0.00077418	-1.6293	-0.00049399	-4.1826	-0.0012682	303.1997345928274	34.272	0.95454	34.272	34.1	35.055	0					65	31	3	0	0	0	0.89803	1	14369	14369		1.5923	0.13716	1	6239600	+		18396	13078	8860	8899	21336	21336					0.17569039722025082
LKLRKRRRPV	10	Unmodified	_LKLRKRRRPV_					0	0	0		sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.4584838747978	2	661.454397	1320.89424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.49	1	112.66	112.16	113.16	0.16914								0	0	0	0.66166	1	48802	48802		1.6526	1.3456	1				18397	16001	8861	8900	21337	21337					0.24662921244112113
LKLVLNGIR	9	Unmodified	_LKLVLNGIR_					0	0	0			REV__ENST00000396522.6_1_14:21967741-21972178:-|nuORF	REV__ENST00000396522.6_1_14:21967741-21972178:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	342.5478088259697	3	342.565843	1024.6757	0.21407	7.3333E-05	1.116	0.00038231	1.3301	0.00045564	342.56629165948453	27.169	0.36892	28.916	28.743	29.112	1.747					17	11	2	0	0	0	0.11901	1	11436	11436		2.7352	1.5419	1	687930	+		18398	12851	8862	8901	21338	21338					0.16434891881931435
LKLWNPLR	8	Unmodified	_LKLWNPLR_					0	0	0		ENSG00000123154|ENST00000418543|WDR83;ENST00000550939.5_1_19:12780789-12781380:+|nuORF	ENSG00000123154|ENST00000418543|WDR83	ENSG00000123154|ENST00000418543|WDR83	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2195312380791	3	347.218555	1038.63383	1.0255	0.00035606	2.8333	0.00098377	3.8587	0.0013398	347.2201937690736	45.246	0.4541	46.612	46.433	46.887	1.3653					32	13	3	0	0	0	0.89051	1	18988	18988		1.4819	0	1	2462100			18399	2181	8863	8902	21339	21339					0.11606336193403877
LKLWRINSKRM	11	Unmodified	_LKLWRINSKRM_					0	0	0		ENST00000525244.5_1_11:85956313-85988207:+|nuORF;nc|ENSG00000074266|O75530-3|EED;ENSG00000074266|ENST00000263360|EED;nc|ENSG00000074266|O75530-2|EED	ENST00000525244.5_1_11:85956313-85988207:+|nuORF	ENST00000525244.5_1_11:85956313-85988207:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	362.7017089724541	4	361.969691	1443.84966	-0.48155	-0.00017431	-1.7692	-0.00064038	-2.2507	-0.00081469	361.96964235529293	61.886	1.9735	61.886	61.267	63.24	0					94	62	2	0	0	0	0.14606	1	26356	26356		1.1098	0.6038	1	1389800			18400	912	8864	8903	21340	21340					0.14548729315720266
LKMIFLQV	8	Unmodified	_LKMIFLQV_					0	0	0			REV__nc|ENSG00000109943|O95727-2|CRTAM	REV__nc|ENSG00000109943|O95727-2|CRTAM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3053771853447	2	496.304081	990.59361	1.5841	0.00078618	0.27169	0.00013484	1.8558	0.00092102	496.30440915894667	64.49	1.812	64.49	63.832	65.644	0					73	56	2	0	0	0	0.88504	1	26761	26761		5.7604	0	1	794100	+		18401	9287	8865	8904	21341	21341					0.09793653478629949
LKPAWNFFF	9	Unmodified	_LKPAWNFFF_					0	0	0		ENST00000466490.6_1_3:133538637-133538781:+|nuORF	ENST00000466490.6_1_3:133538637-133538781:+|nuORF	ENST00000466490.6_1_3:133538637-133538781:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3095580935478	2	585.310752	1168.60695	0.9524	0.00055745	-1.7948	-0.0010505	-0.84241	-0.00049307	585.30956378972	20.926	0.21757	20.926	20.787	21.004	0					10	6	2	0	0	0	0.77526	1	8695	8695		4.3292	0.38484	1	391180			18402	6706	8866	8905	21342	21342					0.029392275822146985
LKPCQILRKII	11	Unmodified	_LKPCQILRKII_					0	0	0		ENST00000547616.2_1_14:19475147-19475555:-|nuORF;ENST00000438441.1_22:16365437-16366175:+|nuORF	ENST00000547616.2_1_14:19475147-19475555:-|nuORF	ENST00000547616.2_1_14:19475147-19475555:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.6237365603447	3	442.288092	1323.84245	3.3657	0.0014886	-0.067982	-3.0068E-05	3.2978	0.0014586	442.2882892410813	105.85	0.11979	106.01	105.95	106.07	0.16679					15	5	4	0	0	0	1.039	1	45113	45113		0.45452	0	1	34424000			18403	6543	8867	8906	21343	21343					0.19347996715350746
LKPGKYFP	8	Unmodified	_LKPGKYFP_					0	0	0			REV__ENSG00000124279|ENST00000264669|FASTKD3	REV__ENSG00000124279|ENST00000264669|FASTKD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	949.5480834841728	1	949.550565	948.543289	3.4608	0.0032862	-4.3952	-0.0041734	-0.93439	-0.00088725	949.5458803930748	107.67	0.14792	107.83	107.75	107.9	0.15796					18	7	4	0	0	0	0.89178	1	46318	46318		0.69038	0	1	85894000	+		18404	9643	8868	8907	21344	21344					0.06695867145128886
LKPSVKNFYTL	11	Unmodified	_LKPSVKNFYTL_					0	0	0		ENSG00000272674|ENST00000609684|PCDHB16	ENSG00000272674|ENST00000609684|PCDHB16	ENSG00000272674|ENST00000609684|PCDHB16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1936828494072	4	328.19332	1308.74417	0.74504	0.00024452	1.1217	0.00036814	1.8668	0.00061266	328.19373702049586	34.384	0.47157	34.681	34.419	34.891	0.29701					46	16	4	0	0	0	1.039	1	14417	14417		0.45452	0.21867	1	2719500			18405	5451	8869	8908	21345	21345					0.10215091671125265
LKQENGILR	9	Unmodified	_LKQENGILR_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.8207275271416	2	535.819473	1069.62439	2.4748	0.0013261	-1.793	-0.00096073	0.68182	0.00036533	535.8183013880017	83.791	0.48778	84.061	83.77	84.257	0.27029					49	15	4	0	0	0	0.71526	1	35012	35012		6.7232	0.99131	1	10319000			18406	2316	8870	8909	21346	21346					0.09236523117237994
LKQITEKLKYQ	11	Unmodified	_LKQITEKLKYQ_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MSMS	GG20161007_CRH_Patient100_W632_02	4	696.4197265505791	2	696.416477	1390.8184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.72	1	116.87	116.37	117.37	0.15228								0	0	0	0.63775	1	50435	50435		2.7352	0	1		+		18407	8844	8871	8910	21347	21347					0.13862434762631892
LKQQNLPVTRI	11	Unmodified	_LKQQNLPVTRI_					0	0	0		nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;ENSG00000092108|ENST00000458591|SCFD1	nc|ENSG00000092108|Q8WVM8-2|SCFD1	nc|ENSG00000092108|Q8WVM8-2|SCFD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2029296755791	4	328.204219	1308.78777	-2.0442	-0.00067092	-1.3499	-0.00044303	-3.3941	-0.0011139	328.20352267034457	39.607	1.16	39.607	39.171	40.331	0					130	36	5	0	0	0	1.0282	1	16622	16622		2.084	0.86914	1	23377000			18408	1159	8872	8911	21348	21348					0.1457270116827658
LKQQNLPVTRI	11	Unmodified	_LKQQNLPVTRI_					0	0	0		nc|ENSG00000092108|Q8WVM8-2|SCFD1;nc|ENSG00000092108|Q8WVM8-3|SCFD1;ENSG00000092108|ENST00000458591|SCFD1	nc|ENSG00000092108|Q8WVM8-2|SCFD1	nc|ENSG00000092108|Q8WVM8-2|SCFD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2031127810478	4	328.204219	1308.78777	-1.9481	-0.00063939	-1.2481	-0.00040963	-3.1962	-0.001049	328.20360582121924	42.223	1.6218	42.223	41.435	43.057	0					154	51	4	0	0	0	0.99899	1	17594	17594		3.8459	1.9395	1	11871000			18409	1159	8872	8911	21349	21349					0.1457270116827658
LKRFLRHPLPK	11	Unmodified	_LKRFLRHPLPK_					0	0	0		ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	352.2303954958916	4	351.979216	1403.88776	1.0878	0.00038288	0.40535	0.00014267	1.4932	0.00052556	352.2301765637922	35.78	0.42992	36.082	35.794	36.224	0.30196					71	39	2	0	0	0	1.039	1	15064	15064		0.45452	0.046251	1	37147000			18410	5057	8873	8912	21350	21350					0.20196983292703408
LKRGRAAG	8	Unmodified	_LKRGRAAG_					0	0	0			REV__ENST00000461325.1_1_3:52550393-52550435:+|nuORF	REV__ENST00000461325.1_1_3:52550393-52550435:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.7632018923759	2	414.761761	827.508969	1.4773	0.00061275	-1.5462	-0.00064132	-0.068895	-2.8575E-05	414.76118648371573	70.254	1.8125	70.576	70.192	72.005	0.32224					142	57	5	0	0	0	0.89178	1	29728	29728		0.69038	0	1	366180000	+		18411	13195	8874	8913	21351	21351					0.08831463776880355
LKRHLAAP	8	Unmodified	_LKRHLAAP_					0	0	0			REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.2887145876884	2	453.287611	904.56067	2.4856	0.0011267	-3.4107	-0.001546	-0.92502	-0.0004193	453.28587712435086	66.63	0.60025	66.954	66.463	67.063	0.32449					23	18	2	0	0	0	0.89176	2	27743	27743;27864		0.79363	0	1	810010	+		18412	13907	8875	8914	21352;21353	21352					0.10457207470790308
LKRHLAAP	8	Unmodified	_LKRHLAAP_					0	0	0			REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	453.287611	904.56067	2.4856	0.0011267	-3.4107	-0.001546	-0.92502	-0.0004193	453.28587712435086	66.63	0.60025	66.954	66.463	67.063	0.32449	0.14833	0.00070708	NaN	0.79363	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810010	+		18413	13907	8875	8914							0.10457207470790308
LKRHLAAP	8	Unmodified	_LKRHLAAP_					0	0	0			REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	REV__ENST00000562866.1_1_16:89783858-89784437:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	453.287611	904.56067	3.0933	0.0014021	-4.7502	-0.0021532	-1.6569	-0.00075107	453.2851253983055	65.259	0.77244	66.658	66.443	67.216	1.3989	-0.14833	-0.00050735	NaN	0.79363	30	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	534880	+		18414	13907	8875	8914							0.10457207470790308
LKRKIFIL	8	Unmodified	_LKRKIFIL_					0	0	0			REV__ENST00000447762.5_1_2:204231693-204244982:+|nuORF	REV__ENST00000447762.5_1_2:204231693-204244982:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2427245974541	3	344.2427	1029.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.09	1	104.27	103.77	104.77	0.1731								0	0	0	1.0178	1	43972	43972		0.45834	0	1		+		18415	13113	8876	8915	21354	21354					0.19260670266976376
LKRKKKLKKR	10	Unmodified	_LKRKKKLKKR_					0	0	0		ENST00000509622.5_1_4:113565874-113567513:+|nuORF	ENST00000509622.5_1_4:113565874-113567513:+|nuORF	ENST00000509622.5_1_4:113565874-113567513:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	663.3430663943291	2	663.482623	1324.95069	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.28	1	101.45	100.95	101.95	0.17032								0	0	0	0.66264	1	42618	42618		0	0	1				18416	7024	8877	8916	21355	21355					0.30121549080740806
LKRLLPTKH	9	Unmodified	_LKRLLPTKH_					0	0	0			REV__tr|A0A7D6ZFP8|A0A7D6ZFP8_9CLOTVanWfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15890PE=4SV=1	REV__tr|A0A7D6ZFP8|A0A7D6ZFP8_9CLOTVanWfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15890PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	369.2448608279228	3	369.244992	1104.71315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.4	1	104.57	104.07	105.07	0.1731								0	0	0	0.42693	1	44158	44158		0.96228	0	1		+		18417	15633	8878	8917	21356	21356					0.16497983147542072
LKRPLRPRKER	11	Unmodified	_LKRPLRPRKER_					0	0	0			REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9882995486259	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.0391	2	14168	14168;14285		0.40827	0.31342	1	399160000	+		18418	13905	8879	8918	21357;21358	21357					0.21513985064598273
LKRRQLVLVPL	11	Unmodified	_LKRRQLVLVPL_					0	0	0			REV__ENST00000332858.10_1_12:49523953-49524016:-|nuORF	REV__ENST00000332858.10_1_12:49523953-49524016:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4809448122978	4	334.48032	1333.89217	-0.046462	-1.5541E-05	-3.1589	-0.0010566	-3.2053	-0.0010721	334.48064893038537	22.694	1.8804	23.908	23.609	25.489	1.2145					295	60	7	0	0	0	1.0402	1	9530	9530		0.094841	0.011491	1	642000000	+		18419	12455	8880	8919	21359	21359					0.23858447715633702
LKSCTTYH	8	Unmodified	_LKSCTTYH_					0	0	0		tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1546203494072	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.126	1	20.126	19.626	20.626	0								0	0	0	1.0178	1	8365	8365		0.45834	0	1				18420	16714	8881	8920	21360	21360					-0.02926434388382404
LKSCTTYH	8	Unmodified	_LKSCTTYH_					0	0	0		tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548034548759	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.246	1	20.246	19.746	20.746	0								0	0	0	1.0178	1	8416	8416		0.45834	0	1				18421	16714	8881	8920	21361	21361					-0.02926434388382404
LKSCTTYH	8	Unmodified	_LKSCTTYH_					0	0	0		tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547729372978	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.565	1	20.565	20.065	21.065	0								0	0	0	1.0178	1	8549	8549		0.45834	0	1				18422	16714	8881	8920	21362	21362					-0.02926434388382404
LKSCTTYH	8	Unmodified	_LKSCTTYH_					0	0	0		tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547424197197	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.398	1	21.398	20.898	21.898	0								0	0	0	1.0178	1	8898	8898		0.45834	0	1				18423	16714	8881	8920	21363	21363					-0.02926434388382404
LKSCTTYH	8	Unmodified	_LKSCTTYH_					0	0	0		tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	tr|A0A7D6VMJ4|A0A7D6VMJ4_9CLOTNitroreductasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1548034548759	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.588	1	21.588	21.088	22.088	0								0	0	0	1.0178	1	8977	8977		0.45834	0	1				18424	16714	8881	8920	21364	21364					-0.02926434388382404
LKSPRRSSQRR	11	Unmodified	_LKSPRRSSQRR_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9093505740166	2	685.908008	1369.80146	2.7523	0.0018878	0.75516	0.00051797	3.5075	0.0024058	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.037	1	35693	35693		1.0715	0.5467	1	4137900			18425	5944	8882	8921	21365	21365					0.1313537172004544
LKTKELIR	8	Unmodified	_LKTKELIR_					0	0	0		ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	ENSG00000198894|ENST00000361786|CIPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.2220947146416	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.04	1	105.04	104.54	105.54	0								0	0	0	1.0178	1	44491	44491		0.40072	0	1				18426	5098	8883	8922	21366	21366					0.1442289912799879
LKTVLFVVF	9	Unmodified	_LKTVLFVVF_					0	0	0		ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.3416015505791	2	533.338978	1064.6634	2.3274	0.0012413	1.4449	0.00077061	3.7723	0.0020119	533.3397627533795	83.98	0.74162	83.98	83.658	84.399	0					76	23	5	0	0	0	0.84963	2	34922	34922;34973		0.6015	0	1	126590000			18427	5199	8884	8923	21367;21368	21367					0.133658554188969
LKVGLFIVV	9	Unmodified	_LKVGLFIVV_					0	0	0			REV__ENST00000505284.5_1_4:128842916-128886288:-|nuORF	REV__ENST00000505284.5_1_4:128842916-128886288:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3340331912041	2	494.333696	986.652839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.63	1	104.63	104.13	105.13	0								0	0	0	0.42693	1	44205	44205		0.6015	0	1		+		18428	10716	8885	8924	21369	21369					0.15897872764458043
LKVKFTNSN	9	Unmodified	_LKVKFTNSN_					0	0	0		TOR1AIP1|p.D534Y|1|0.07|ENSG00000143337|chr1:179918087-179918087|G/T|missense_variant;nc|ENSG00000143337|Q5JTV8-2|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-4|TOR1AIP1;ENSG00000143337|ENST00000606911|TOR1AIP1;nc|ENSG00000143337|Q5JTV8-3|TOR1AIP1	TOR1AIP1|p.D534Y|1|0.07|ENSG00000143337|chr1:179918087-179918087|G/T|missense_variant	TOR1AIP1|p.D534Y|1|0.07|ENSG00000143337|chr1:179918087-179918087|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8047363162041	2	525.800749	1049.58694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.44	1	103.62	103.12	104.12	0.18066								0	0	0	0.42693	1	43556	43556		1.8442	0	1				18429	3024	8886	8925	21370	21370					0.06413431851615314
LKVKINLLA	9	Unmodified	_LKVKINLLA_					0	0	0			REV__ENST00000397031.2_1_2:182825941-182826409:-|nuORF	REV__ENST00000397031.2_1_2:182825941-182826409:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.6728088259697	3	337.902344	1010.6852	2.2153	0.00074855	-2.3157	-0.00078248	-0.10043	-3.3937E-05	337.90186076120546	75.435	0.36033	77.217	77.103	77.463	1.7817					19	11	2	0	0	0	0.11954	1	31705	31705		0.26902	0	1	535920	+	+	18430	8379	8887	8926	21371	21371					0.18028660167442467
LKVKLFLV	8	Unmodified	_LKVKLFLV_					0	0	0			REV__ENST00000517756.5_1_8:110355687-110355771:+|nuORF	REV__ENST00000517756.5_1_8:110355687-110355771:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.3367187380791	2	480.336239	958.657924	3.5615	0.0017107	-0.14505	-6.9674E-05	3.4165	0.0016411	480.33571885782436	109.66	0.72376	109.71	109.38	110.11	0.048843					63	26	3	0	0	0	0.89198	1	47279	47279		0	0	1	13539000	+		18431	13608	8888	8927	21372	21372					0.17694176627071556
LKVPFLPIVR	10	Unmodified	_LKVPFLPIVR_					0	0	0			REV__ENST00000533419.1_1_11:65084636-65088189:+|nuORF	REV__ENST00000533419.1_1_11:65084636-65088189:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5968200564384	3	394.597143	1180.7696	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.56	1	33.857	33.357	34.357	0.29701								0	0	0	0.66222	1	14091	14091		0.69767	0	1		+		18432	13727	8889	8928	21373	21373					0.18644610984188148
LKVRFRSKKLK	11	Unmodified	_LKVRFRSKKLK_					0	0	0			REV__ENSG00000125772|ENST00000379019|GPCPD1	REV__ENSG00000125772|ENST00000379019|GPCPD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9721557497978	2	701.972088	1401.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.107	1	39.107	38.607	39.607	0								0	0	0	0.63775	1	16391	16391		1.3295	0	1		+		18433	9678	8890	8929	21374	21374					0.24473538981237652
LKVSTILLM	9	Unmodified	_LKVSTILLM_					0	0	0			REV__ENST00000469714.1_1_X:17092694-17165601:+|nuORF	REV__ENST00000469714.1_1_X:17092694-17165601:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3231994509697	2	509.322471	1016.63039	1.7597	0.00089624	1.202	0.00061218	2.9616	0.0015084	509.32280786803705	71.216	0.76572	71.54	71.271	72.037	0.32359					56	23	4	0	0	0	0.12251	1	29854	29854		41.84	0	1	9020700	+		18434	13271	8891	8930	21375	21375					0.12273905304550681
LKWDRKKKRFV	11	Unmodified	_LKWDRKKKRFV_					0	0	0		ENSG00000123064|ENST00000306014|DDX54;nc|ENSG00000123064|Q8TDD1-2|DDX54	ENSG00000123064|ENST00000306014|DDX54	ENSG00000123064|ENST00000306014|DDX54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3162414431572	3	501.980539	1502.91979	3.043	0.0015275	-1.0529	-0.00052851	1.9902	0.00099902	501.97995665204746	61.643	0.78511	63.061	62.834	63.619	1.4177					71	24	4	0	0	0	1.0393	1	25953	25953		0.094841	0	1	11458000			18435	2178	8892	8931	21376	21376					0.18844350975859925
LKWFVYFCFTY	11	Unmodified	_LKWFVYFCFTY_					0	0	0		tr|A0A7D7A2G0|A0A7D7A2G0_9CLOT[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19745PE=3SV=1	tr|A0A7D7A2G0|A0A7D7A2G0_9CLOT[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19745PE=3SV=1	tr|A0A7D7A2G0|A0A7D7A2G0_9CLOT[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19745PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2515746951103	3	506.249303	1515.72608	1.0143	0.00051349	4.0937	0.0020724	5.108	0.0025859	506.25100480895026	20.521	0.2495	20.521	20.382	20.631	0					16	7	3	0	0	0	0.9945	1	8526	8526		4.1166	0.27072	1	724700			18436	17254	8893	8932	21377	21377					-0.011153665752317465
LKWGLWLLKLR	11	Unmodified	_LKWGLWLLKLR_					0	0	0			REV__ENST00000549651.1_1_12:70636242-70636440:-|nuORF	REV__ENST00000549651.1_1_12:70636242-70636440:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1993286013603	3	475.974614	1424.90201	2.49	0.0011852	-2.8367	-0.0013502	-0.34663	-0.00016499	475.97496728140106	63.398	0.12539	63.398	63.335	63.46	0					5	3	2	0	0	0	0.14606	1	26447	26447		0.073264	0.073264	1	163040	+		18437	13822	8894	8933	21378	21378					0.20655635721027465
LKWLHCLGR	9	Unmodified	_LKWLHCLGR_					0	0	0			REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3244506716728	2	563.321128	1124.6277	0.62393	0.00035147	3.1887	0.0017962	3.8126	0.0021477	563.323296450614	22.433	0.3576	22.656	22.436	22.794	0.223					22	11	2	0	0	0	0.61249	1	9339	9339		10.824	3.5347	1	1182000	+		18438	14217	8895	8934	21379	21379					0.07037494690257518
LKWLHCLGR	9	Unmodified	_LKWLHCLGR_					0	0	0			REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3232910037041	2	563.321128	1124.6277	1.0647	0.00059976	2.796	0.0015751	3.8607	0.0021748	563.3227806462518	21.476	0.36369	22.653	22.445	22.809	1.177					19	11	2	0	0	0	0.77526	1	8984	8984		4.3292	0.38484	1	699510	+		18439	14217	8895	8934	21380	21380					0.07037494690257518
LKWLHCLGR	9	Unmodified	_LKWLHCLGR_					0	0	0			REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	563.321128	1124.6277	0.53808	0.00030311	2.9861	0.0016821	3.5242	0.0019852	563.3227506363754	22.65	0.34654	22.65	22.463	22.809	0	0.0063698	0.00013734	NaN	10.824	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1972800	+		18440	14217	8895	8934							0.07037494690257518
LKWLHCLGR	9	Unmodified	_LKWLHCLGR_					0	0	0			REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	REV__HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|44|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	563.321128	1124.6277	0.46363	0.00026117	1.9468	0.0010967	2.4104	0.0013578	563.3223294750161	21.042	0.304	22.617	22.468	22.772	1.5748	-0.027495	-0.0010336	NaN	10.824	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	330020	+		18441	14217	8895	8934							0.07037494690257518
LKWLLFILFLV	11	Unmodified	_LKWLLFILFLV_					0	0	0			REV__chr3:127580163-127591890|420|13.89|0.83|4.07|-|ENST00000490643|TPRA1,TPRA1	REV__chr3:127580163-127591890|420|13.89|0.83|4.07|-|ENST00000490643|TPRA1,TPRA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.9794189333916	4	351.980893	1403.89447	-1.3556	-0.00047714	-1.5826	-0.00055706	-2.9382	-0.0010342	351.9802264837377	36.565	0.81154	36.565	36.27	37.081	0					133	55	3	0	0	0	1.0362	3	15299	15299;15377;15423		1.3296	0.63198	1	35389000	+		18442	8314	8896	8935	21381;21382;21383	21381					0.20867483400706988
LKWPRAINRGI	11	Unmodified	_LKWPRAINRGI_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.7070190310478	4	331.705657	1322.79352	1.6165	0.0005362	1.6097	0.00053393	3.2261	0.0010701	331.7062428505499	43.852	0.85657	45.796	45.165	46.021	1.9438					59	27	4	0	0	0	1.0191	1	18395	18395		2.6312	0	1	5173900	+		18443	9666	8897	8936	21384	21384					0.1450384447059605
LKWPRAINRGI	11	Unmodified	_LKWPRAINRGI_					0	0	0			REV__ENSG00000125482|ENST00000334270|TTF1	REV__ENSG00000125482|ENST00000334270|TTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.7068359255791	4	331.705657	1322.79352	1.7012	0.0005643	2.5876	0.00085831	4.2888	0.0014226	331.95741265139986	44.249	0.47505	46.193	45.989	46.464	1.9438					25	14	2	0	0	0	1.0191	1	18530	18530		2.6312	0	1	2481500	+		18444	9666	8897	8936	21385	21385					0.1450384447059605
LKWTRRPA	8	Unmodified	_LKWTRRPA_					0	0	0			REV__chr3:126883339-126914680|124|10.01|0.48|4.39|+|1|TE_info:MER21B,MER21B_dup554,ERVL,LTR,donor,+,126882781,126883339|None,CHCHD6|7	REV__chr3:126883339-126914680|124|10.01|0.48|4.39|+|1|TE_info:MER21B,MER21B_dup554,ERVL,LTR,donor,+,126882781,126883339|None,CHCHD6|7	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2119933962822	3	343.210171	1026.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.71	1	101.89	101.39	102.39	0.17032								0	0	0	1.0178	1	42797	42797		0.40072	0.050084	1		+		18445	8313	8898	8937	21386	21386					0.0964428139084248
LKWTVKPAPR	10	Unmodified	_LKWTVKPAPR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2511779665947	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.496	1	42.816	42.316	43.316	0.32058								0	0	0	0.66222	1	17850	17850		0.69767	0.1345	1		+		18446	10496	8899	8938	21387	21387					0.13413965801987615
LKWTVKPAPR	10	Unmodified	_LKWTVKPAPR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509338259697	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.458	1	86.702	86.202	87.202	0.24387								0	0	0	0.66222	1	36160	36160		0.69767	0.42865	1		+		18447	10496	8899	8938	21388	21388					0.13413965801987615
LKWTVKPAPR	10	Unmodified	_LKWTVKPAPR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2490112185478	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.406	1	32.687	32.187	33.187	1.2813								0	0	0	0.66222	1	13175	13175		0.69767	0.1345	1		+		18448	10496	8899	8938	21389	21389					0.13413965801987615
LKYKNLFALW	10	Unmodified	_LKYKNLFALW_					0	0	0			REV__nc|ENSG00000095564|O14981-2|BTAF1	REV__nc|ENSG00000095564|O14981-2|BTAF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	648.3818847537041	2	648.379166	1294.74378	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.197	1	84.835	84.335	85.335	1.6379								0	0	0	0.66008	1	34898	34898		4.3292	0.73274	1		+		18449	8927	8900	8939	21390	21390					0.10819716741934826
LKYLGRWY	8	Unmodified	_LKYLGRWY_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	366.0761596560478	3	366.874677	1097.6022	-0.27098	-9.9414E-05	0.25058	9.1931E-05	-0.020397	-7.4831E-06	366.87380632708414	30.497	0.34095	31.779	31.595	31.935	1.2825					14	10	2	0	0	0	2.3239	1	12765	12765		0.45834	0	1	295750	+		18450	9529	8901	8940	21391	21391					0.05730343439472563
LLAAAQRSSL	10	Unmodified	_LLAAAQRSSL_					0	0	0			REV__ENST00000498707.5_1_3:64673464-64673620:-|nuORF	REV__ENST00000498707.5_1_3:64673464-64673620:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3065673708916	2	515.306198	1028.59784	2.879	0.0014836	-1.7467	-0.00090006	1.1323	0.0005835	515.3058126834543	59.253	0.39756	61.222	61.037	61.435	1.969					20	12	3	0	0	0	0.84024	1	24873	24873		7.9102	0	1	1378600	+		18451	13496	8902	8941	21392	21392					0.08468834225891442
LLAAFCKLI	9	Unmodified	_LLAAFCKLI_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3068725466728	2	496.304081	990.59361	2.4009	0.0011916	0.45009	0.00022338	2.851	0.001415	496.3049237884976	79.466	0.57237	79.766	79.527	80.1	0.30047					41	17	3	0	0	0	0.75267	1	33182	33182		5.2307	0	1	3598200			18452	1372	8903	8942	21393	21393					0.09793653478641318
LLAAFCKLI	9	Unmodified	_LLAAFCKLI_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3054077029228	2	496.304081	990.59361	1.8967	0.00094136	1.4188	0.00070415	3.3155	0.0016455	496.30476648409666	79.097	0.43485	80.832	80.598	81.033	1.735					24	13	3	0	0	0	0.64949	1	33220	33220		9.3474	0	1	3401200			18453	1372	8903	8942	21394	21394					0.09793653478641318
LLAAFDQWRE	10	Unmodified	_LLAAFDQWRE_					0	0	0		nc|ENSG00000092964|Q16555-2|DPYSL2;nc|ENSG00000092964|Q16555|DPYSL2;ENSG00000092964|ENST00000521913|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	nc|ENSG00000092964|Q16555-2|DPYSL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8254272341728	2	624.822212	1247.62987	3.1514	0.0019691	1.2264	0.00076631	4.3778	0.0027354	624.8230263647149	90.753	0.47692	92.119	91.897	92.374	1.366					44	14	4	0	0	0	0.52861	1	38270	38270		26.268	0.86883	1	6524700			18454	1169	8904	8943	21395	21395					0.015962019090238755
LLAAGRRP	8	Unmodified	_LLAAGRRP_					0	0	0			REV__ENSG00000166507|ENST00000309979|NDST2	REV__ENSG00000166507|ENST00000309979|NDST2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	427.1962463259697	2	427.271961	852.52937	4.1733	0.0017831	-2.1693	-0.00092689	2.004	0.00085624	427.270377326657	91.312	0.40889	92.293	92.071	92.48	0.98157					19	12	2	0	0	0	2.3239	1	38392	38392		9.3474	0	1	466160	+		18455	10828	8905	8944	21396	21396					0.09720634436700948
LLAAGRRP	8	Unmodified	_LLAAGRRP_					0	0	0			REV__ENSG00000166507|ENST00000309979|NDST2	REV__ENSG00000166507|ENST00000309979|NDST2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	427.1963683962822	2	427.271961	852.52937	3.7588	0.001606	-2.2098	-0.00094421	1.549	0.00066183	427.27093406517497	90.743	0.31941	92.108	91.929	92.249	1.366					15	9	2	0	0	0	2.3239	1	38262	38262		9.3474	0	1	801990	+		18456	10828	8905	8944	21397	21397					0.09720634436700948
LLAAIMPMI	9	Unmodified	_LLAAIMPMI_					0	0	0			REV__tr|A0A553SJI5|A0A553SJI5_NIACISuperoxidedismutase[Cu-Zn]OS=NialliacirculansOX=1397GN=CEQ21_16905PE=3SV=1	REV__tr|A0A553SJI5|A0A553SJI5_NIACISuperoxidedismutase[Cu-Zn]OS=NialliacirculansOX=1397GN=CEQ21_16905PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7868224978447	2	486.784667	971.554781	1.6323	0.00079459	2.4628	0.0011988	4.0951	0.0019934	486.78556448183997	39.345	0.27892	39.345	39.204	39.483	0					17	8	3	0	0	0	0.16975	2	16471	16471;16520		36.466	8.2929	1	1661800	+		18457	14907	8906	8945	21398;21399	21398					0.0678660485260707
LLAALALIAP	10	Unmodified	_LLAALALIAP_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	322.1596862673759	3	322.551311	964.632104	-0.16044	-5.1751E-05	1.7177	0.00055405	1.5573	0.0005023	322.551930159014	18.481	0.21531	18.654	18.505	18.72	0.17285					10	7	2	0	0	0	0.12561	1	7685	7685		0.15932	0	1	304720	+		18458	10580	8907	8946	21400	21400					0.1483728238480353
LLAALPAQA	9	Unmodified	_LLAALPAQA_					0	0	0		ENST00000522399.1_1_1:231090115-231114586:-|nuORF	ENST00000522399.1_1_1:231090115-231114586:-|nuORF	ENST00000522399.1_1_1:231090115-231114586:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.8833801150322	2	434.268553	866.522553	2.7995	0.0012157	0.27131	0.00011782	3.0708	0.0013336	434.26710018161515	44.946	0.21967	46.311	46.149	46.369	1.3653					10	6	2	0	0	0	0.10591	1	18802	18802		7.9102	3.5809	1	633790			18459	7092	8908	8947	21401	21401					0.08395276765452309
LLAALPAQA	9	Unmodified	_LLAALPAQA_					0	0	0		ENST00000522399.1_1_1:231090115-231114586:-|nuORF	ENST00000522399.1_1_1:231090115-231114586:-|nuORF	ENST00000522399.1_1_1:231090115-231114586:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	434.268553	866.522553	2.2615	0.00098211	0.96506	0.0004191	3.2266	0.0014012	434.2684620156309	44.376	0.25441	46.335	46.193	46.448	1.9596	0.011991	9.7718E-05	NaN	7.9102	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1066200			18460	7092	8908	8947							0.08395276765452309
LLAATVVPRP	10	Unmodified	_LLAATVVPRP_					0	0	0		ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2228576540947	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.338	1	72.338	71.838	72.838	0								0	0	0	0.66227	1	30121	30121		0.62683	0.22611	1				18461	5969	8909	8948	21402	21402					0.12766899127996112
LLAATVVPRP	10	Unmodified	_LLAATVVPRP_					0	0	0		ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2229186892509	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.123	1	73.448	72.948	73.948	0.32494								0	0	0	0.66222	1	30587	30587		0.69767	0.42865	1				18462	5969	8909	8948	21403	21403					0.12766899127996112
LLAATVVPRP	10	Unmodified	_LLAATVVPRP_					0	0	0		ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2234374880791	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.295	1	73.619	73.119	74.119	0.32494								0	0	0	0.66222	1	30663	30663		0.69767	0.42865	1				18463	5969	8909	8948	21404	21404					0.12766899127996112
LLAATVVPRP	10	Unmodified	_LLAATVVPRP_					0	0	0		ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2223998904228	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.537	1	78.846	78.346	79.346	0.30933								0	0	0	0.66222	1	32834	32834		0.69767	0.23933	1				18464	5969	8909	8948	21405	21405					0.12766899127996112
LLAATVVPRP	10	Unmodified	_LLAATVVPRP_					0	0	0		ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	ENST00000348513.10_1_17:38804349-38804502:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2235900759697	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.303	1	89.526	89.026	90.026	0.22359								0	0	0	0.66151	1	37431	37431		1.9064	0.83491	1				18465	5969	8909	8948	21406	21406					0.12766899127996112
LLAAWTARA	9	Unmodified	_LLAAWTARA_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-2|APP;ENST00000474136.5_1_21:27382178-27543016:-|nuORF	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7859985232353	2	486.784902	971.55525	2.3352	0.0011367	0.58252	0.00028356	2.9177	0.0014203	486.78536382608877	38.725	0.26446	39.033	38.888	39.152	0.30857					16	8	2	0	0	0	0.15456	1	16266	16266		38.176	1.7094	1	1576400			18466	2989	8910	8949	21407	21407					0.0683348388831746
LLAAWTARA	9	Unmodified	_LLAAWTARA_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-2|APP;ENST00000474136.5_1_21:27382178-27543016:-|nuORF	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7866088747978	2	486.784902	971.55525	0.68617	0.00033402	2.7387	0.0013332	3.4249	0.0016672	486.7860912434299	37.361	0.27076	38.645	38.523	38.794	1.284					31	22	2	0	0	0	0.019432	1	15686	15686		99.799	36.236	1	4304900			18467	2989	8910	8949	21408	21408					0.0683348388831746
LLAAWTARA	9	Unmodified	_LLAAWTARA_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-2|APP;ENST00000474136.5_1_21:27382178-27543016:-|nuORF	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7855712771416	2	486.784902	971.55525	0.73927	0.00035987	0.52832	0.00025718	1.2676	0.00061704	486.7854915619776	36.712	0.22147	38.53	38.466	38.688	1.8176					19	14	2	0	0	0	0.019432	1	15398	15398		99.799	36.236	1	3442500			18468	2989	8910	8949	21409	21409					0.0683348388831746
LLAAWTARA	9	Unmodified	_LLAAWTARA_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-2|APP;ENST00000474136.5_1_21:27382178-27543016:-|nuORF	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	486.784902	971.55525	1.6323	0.00079459	1.981	0.00096434	3.6133	0.0017589	486.78556448183997	39.345	0.27892	39.345	39.204	39.483	0	0.15593	0.00066265	NaN	38.176	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1661800			18469	2989	8910	8949							0.0683348388831746
LLADRRLR	8	Unmodified	_LLADRRLR_					0	0	0			REV__ENSG00000237172|ENST00000449549|B3GNT9	REV__ENSG00000237172|ENST00000449549|B3GNT9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.8251525759697	2	506.82235	1011.63015	2.0704	0.0010493	3.1967	0.0016202	5.2671	0.0026695	506.82389184700514	45.866	0.25292	46.195	46.08	46.333	0.32899					17	7	3	0	0	0	0.783	1	19246	19246		28.487	0	1	1075200	+		18470	11908	8911	8950	21410	21410					0.12479666419562818
LLADVTHLL	9	Unmodified	_LLADVTHLL_					0	0	0		ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8015624880791	2	497.800217	993.585882	2.1935	0.0010919	0.45981	0.00022889	2.6533	0.0013208	497.80068836722694	65.885	0.27586	67.284	67.094	67.37	1.3989					16	8	2	0	0	0	0.13873	1	27649	27649		39.957	9.7325	1	1277700			18471	3614	8912	8951	21411	21411					0.08883217482730288
LLADVTHLL	9	Unmodified	_LLADVTHLL_					0	0	0		ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8017761111259	2	497.800217	993.585882	1.6833	0.00083796	0.83063	0.00041349	2.514	0.0012514	497.8005063408884	65.42	0.24986	67.328	67.187	67.437	1.9085					14	7	2	0	0	0	0.13873	1	27450	27450		39.957	3.9131	1	1886200			18472	3614	8912	8951	21412	21412					0.08883217482730288
LLADVTHLL	9	Unmodified	_LLADVTHLL_					0	0	0		ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	497.800217	993.585882	1.4361	0.00071488	1.4805	0.000737	2.9166	0.0014519	497.8008776987034	67.608	0.2226	67.608	67.473	67.695	0	0.20098	0.00074743	NaN	39.957	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535490			18473	3614	8912	8951							0.08883217482730288
LLAEIGAVTL	10	Unmodified	_LLAEIGAVTL_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34;ENST00000496583.1_1_19:54695101-54695536:+|nuORF	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3093444705009	2	500.307875	998.601197	2.9211	0.0014615	-0.84273	-0.00042163	2.0784	0.0010398	500.3073639626898	75.962	0.27835	76.284	76.144	76.422	0.32163					17	8	3	0	0	0	0.32206	1	31752	31752		37.974	11.09	1	1404100			18474	4166	8913	8952	21413	21413					0.10184084279910621
LLAEIGAVTL	10	Unmodified	_LLAEIGAVTL_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34;ENST00000496583.1_1_19:54695101-54695536:+|nuORF	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3098937869072	2	500.307875	998.601197	3.0578	0.0015298	0.21138	0.00010575	3.2691	0.0016356	500.30810543260986	74.924	0.34643	76.23	76.028	76.374	1.3063					17	10	2	0	0	0	0.17319	1	31430	31430		52.268	0	1	2355800			18475	4166	8913	8952	21414	21414					0.10184084279910621
LLAELLTHL	9	Unmodified	_LLAELLTHL_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.8163940310478	2	511.815867	1021.61718	1.8604	0.00095217	-1.6041	-0.00082099	0.25631	0.00013118	511.81521927125726	78.6	0.27798	78.91	78.769	79.047	0.30933					13	8	2	0	0	0	0.13873	1	32871	32871		39.957	15.937	1	658530			18476	2719	8914	8953	21415	21415					0.10723790516806275
LLAELLTHL	9	Unmodified	_LLAELLTHL_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8179199099541	2	511.815867	1021.61718	2.7708	0.0014181	0.62861	0.00032173	3.3994	0.0017399	511.8162699648683	77.622	0.38037	78.903	78.728	79.108	1.2809					24	11	3	0	0	0	0.0082953	2	32597	32549;32597		109.63	49.24	1	1826800			18477	2719	8914	8953	21416;21417	21417					0.10723790516806275
LLAELLTHL	9	Unmodified	_LLAELLTHL_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8171264529228	2	511.815867	1021.61718	1.9575	0.0010019	0.4254	0.00021773	2.3829	0.0012196	511.81622384854603	77.089	0.41736	78.84	78.623	79.041	1.7514					25	12	3	0	0	0	0.031324	2	32361	32314;32361		85.357	53.051	1	1403800			18478	2719	8914	8953	21418;21419	21419					0.10723790516806275
LLAELLTHL	9	Unmodified	_LLAELLTHL_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4;ENST00000488222.5_1_7:45142883-45145249:-|nuORF	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.815867	1021.61718	1.9794	0.0010131	-1.8373	-0.00094035	0.14215	7.2756E-05	511.8149518744232	79.269	0.30621	79.269	79.085	79.391	0	0.28869	-0.0012781	NaN	109.63	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	563330			18479	2719	8914	8953							0.10723790516806275
LLAEMCILI	9	Carbamidomethyl (C)	_LLAEMC(Carbamidomethyl (C))ILI_	LLAEMC(1)ILI		LLAEMC(47)ILI		0	1	0		ENSG00000067064|ENST00000381344|IDI1;nc|ENSG00000067064|Q13907|IDI1;ENST00000482091.1_1_10:1089912-1094811:-|nuORF	ENSG00000067064|ENST00000381344|IDI1	ENSG00000067064|ENST00000381344|IDI1	MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3036376833916	2	538.298139	1074.58172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.19	1	75.508	75.008	76.008	1.318								0	0	0	0.041347	1	31131	31131		46.921	10.877	1				18480	817	8915	8954	21420	21420	2				0.04741668673136701
LLAERDLYL	9	Unmodified	_LLAERDLYL_					0	0	0		ENST00000469269.1_1_20:36758623-36761344:-|nuORF;ENSG00000198959|ENST00000361475|TGM2	ENST00000469269.1_1_20:36758623-36761344:-|nuORF	ENST00000469269.1_1_20:36758623-36761344:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.3174926638603	2	553.316232	1104.61791	1.5502	0.00085774	0.57997	0.00032091	2.1302	0.0011787	553.3162687786104	51.772	0.22293	51.772	51.631	51.854	0					12	6	2	0	0	0	0.16939	1	21590	21590		36.506	2.4038	1	725820			18481	5111	8916	8955	21421	21421					0.0697858516582528
LLAERDLYL	9	Unmodified	_LLAERDLYL_					0	0	0		ENST00000469269.1_1_20:36758623-36761344:-|nuORF;ENSG00000198959|ENST00000361475|TGM2	ENST00000469269.1_1_20:36758623-36761344:-|nuORF	ENST00000469269.1_1_20:36758623-36761344:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3179809451103	2	553.316232	1104.61791	1.632	0.00090301	2.4476	0.0013543	4.0796	0.0022573	553.3176012587256	49.466	0.47311	51.444	51.192	51.665	1.9772					30	14	3	0	0	0	0.1052	1	20729	20729		47.594	5.4998	1	2487400			18482	5111	8916	8955	21422	21422					0.0697858516582528
LLAERLGRRQ	10	Unmodified	_LLAERLGRRQ_					0	0	0			REV__ENSG00000173546|ENST00000308508|CSPG4	REV__ENSG00000173546|ENST00000308508|CSPG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3710204958916	2	606.370195	1210.72584	2.6989	0.0016366	-0.80005	-0.00048513	1.8989	0.0011514	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	0.88022	1	31851	31851		3.5965	0.60125	1	6855700	+		18483	11104	8917	8956	21423	21423					0.12890394539772387
LLAETLLVV	9	Unmodified	_LLAETLLVV_					0	0	0			REV__nc|ENSG00000020219|A6NM43|CCT8L1P	REV__nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.8137390017509	2	485.812793	969.611034	1.8315	0.00088976	0.47105	0.00022884	2.3025	0.0011186	485.81290030867495	79.871	0.77573	79.871	79.641	80.417	0					54	24	3	0	0	0	0.087207	1	33217	33217		53.576	0	1	7103400	+		18484	11711	8918	8957	21424	21424					0.12501272285282994
LLAETLLVV	9	Unmodified	_LLAETLLVV_					0	0	0			REV__nc|ENSG00000020219|A6NM43|CCT8L1P	REV__nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	970.6130859255791	1	970.61831	969.611034	1.7767	0.0017245	-0.225	-0.00021839	1.5517	0.0015061	970.6177277611152	79.923	0.80696	79.923	79.671	80.478	0					48	25	3	0	0	0	0.087207	1	33382	33382		53.576	2.7205	1	3883400	+		18485	11711	8918	8957	21425	21425					0.12501272285282994
LLAETLLVV	9	Unmodified	_LLAETLLVV_					0	0	0			REV__nc|ENSG00000020219|A6NM43|CCT8L1P	REV__nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.8133422732353	2	485.812793	969.611034	2.5324	0.0012303	0.050184	2.438E-05	2.5826	0.0012547	485.8126996396215	79.466	0.79433	79.766	79.558	80.353	0.30047					58	24	3	0	0	0	0.15478	1	33323	33323		38.151	0	1	6280000	+		18486	11711	8918	8957	21426	21426					0.12501272285282994
LLAETLLVV	9	Unmodified	_LLAETLLVV_					0	0	0			REV__nc|ENSG00000020219|A6NM43|CCT8L1P	REV__nc|ENSG00000020219|A6NM43|CCT8L1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.8135558962822	2	485.812793	969.611034	1.8593	0.00090326	0.40147	0.00019504	2.2607	0.0010983	485.8129583721364	78.106	1.0578	79.857	79.495	80.553	1.7514					104	33	4	0	0	0	0.061246	1	32771	32771		63.563	3.1733	1	18841000	+		18487	11711	8918	8957	21427	21427					0.12501272285282994
LLAFLQVLYKY	11	Unmodified	_LLAFLQVLYKY_					0	0	0			REV__ENST00000490164.1_1_10:92987487-92987601:+|nuORF	REV__ENST00000490164.1_1_10:92987487-92987601:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9100829958916	2	685.907756	1369.80096	2.2313	0.0015305	1.4785	0.0010141	3.7098	0.0025446	685.9088979398654	82.982	1.3835	83.252	82.573	83.956	0.27029					122	44	3	0	0	0	1.0362	1	34548	34548		1.3295	0.87119	1	1896900	+		18488	13419	8919	8958	21428	21428					0.13085139227655418
LLAGGRTK	8	Unmodified	_LLAGGRTK_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000497886.5_1_16:2128976-2136835:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2640258669853	2	408.25852	814.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.757	1	48.088	47.588	48.588	0.33034								0	0	0	1.0178	1	20032	20032		2.5775	0	1				18489	1421	8920	8959	21429	21429					0.08781525825520475
LLAHWMACI	9	Unmodified	_LLAHWMACI_					0	0	0		nc|ENSG00000183960|Q96L42-2|KCNH8;ENST00000452398.5_1_3:19388190-19491848:+|nuORF;KCNH8|p.G378Efs*11|1|0.04|ENSG00000183960|chr3:19395266-19395266|G/-|frameshift_variant;ENSG00000089558|ENST00000264661|KCNH4;ENSG00000183960|ENST00000328405|KCNH8	nc|ENSG00000183960|Q96L42-2|KCNH8	nc|ENSG00000183960|Q96L42-2|KCNH8	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2735473513603	2	529.269716	1056.52488	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.96	1	81.677	81.177	82.177	1.7167								0	0	0	0.341	1	33536	33536		14.582	5.2343	1				18490	1127	8921	8960	21430	21430					-0.0011233409272790595
LLALHSAA	8	Unmodified	_LLALHSAA_					0	0	0		ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	ENSG00000101986|ENST00000218104|ABCD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.2399474978447	2	398.239796	794.465038	0.10273	4.091E-05	-0.22852	-9.1005E-05	-0.12579	-5.0096E-05	398.2399537911972	16.098	0.14483	17.138	17.037	17.182	1.0392					7	4	2	0	0	0	0.74212	1	6688	6688		26.341	0	1	2008800			18491	1373	8922	8961	21431	21431					0.05958434559897796
LLAMHFMML	9	Unmodified	_LLAMHFMML_					0	0	0			REV__tr|A0A553SH29|A0A553SH29_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12045PE=4SV=1	REV__tr|A0A553SH29|A0A553SH29_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12045PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2836181521416	2	553.781601	1105.54865	1.6843	0.00093271	1.0192	0.0005644	2.7034	0.0014971	554.2827875927527	65.686	0.18266	67.595	67.496	67.679	1.9085					8	5	2	0	0	0	0.39097	1	27553	27553		20.871	7.3633	1	815740	+		18492	14775	8923	8962	21432	21432					9.763349430613744E-05
LLAMHFMML	9	Unmodified	_LLAMHFMML_					0	0	0			REV__tr|A0A553SH29|A0A553SH29_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12045PE=4SV=1	REV__tr|A0A553SH29|A0A553SH29_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12045PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	553.781601	1105.54865	1.6843	0.00093271	1.0192	0.0005644	2.7034	0.0014971	554.2827875927527	65.686	0.18266	67.595	67.496	67.679	1.9085	0.038681	0.0013505	NaN	20.871	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	815740	+		18493	14775	8923	8962							9.763349430613744E-05
LLANIVPIA	9	Unmodified	_LLANIVPIA_					0	0	0		ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	923.5931274294853	1	923.59243	922.585153	2.7344	0.0025254	-0.41402	-0.00038239	2.3203	0.002143	923.5919742575502	72.676	0.2857	74.486	74.353	74.639	1.8101					13	8	2	0	0	0	0.078975	1	30492	30492		56.541	9.6204	1	1194100			18494	5209	8924	8963	21433	21433					0.12076422833649758
LLANIVPIA	9	Unmodified	_LLANIVPIA_					0	0	0		ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	923.59243	922.585153	1.761	0.0016265	-1.8126	-0.0016741	-0.051536	-4.7599E-05	923.5908906899293	74.86	0.25108	74.86	74.714	74.965	0	0.19623	-0.00085312	NaN	56.541	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360770			18495	5209	8924	8963							0.12076422833649758
LLANIVPIA	9	Unmodified	_LLANIVPIA_					0	0	0		ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	ENSG00000212907|ENST00000361335|MT-ND4L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	923.59243	922.585153	2.6152	0.0024153	-0.42951	-0.0003967	2.1856	0.0020186	923.5916807686846	74.321	0.2217	74.646	74.518	74.74	0.32463	-0.018228	0.00042427	NaN	56.541	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461840			18496	5209	8924	8963							0.12076422833649758
LLAPIRVLL	9	Unmodified	_LLAPIRVLL_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4;LPCAT4|p.G105Sfs*202|1|0.24|ENSG00000176454|chr15:34365170-34365173|AGCC/-|frameshift_variant	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3526183962822	2	504.35242	1006.69029	3.7127	0.0018725	-0.70103	-0.00035357	3.0117	0.0015189	504.35189385877965	73.75	0.31458	75.068	74.904	75.218	1.318					22	9	3	0	0	0	0.093059	1	30937	30937		57.471	0	1	1369600			18497	4411	8925	8964	21434	21434					0.18720964030080722
LLAPIRVLL	9	Unmodified	_LLAPIRVLL_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4;LPCAT4|p.G105Sfs*202|1|0.24|ENSG00000176454|chr15:34365170-34365173|AGCC/-|frameshift_variant	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.3533813357353	2	504.35242	1006.69029	2.4813	0.0012515	0.41858	0.00021111	2.8999	0.0014626	504.3523958177296	73.163	0.31732	74.973	74.797	75.114	1.8101					20	9	3	0	0	0	0.16939	1	30701	30701		39.957	5.8549	1	1412600			18498	4411	8925	8964	21435	21435					0.18720964030080722
LLAPIRVLL	9	Unmodified	_LLAPIRVLL_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4;LPCAT4|p.G105Sfs*202|1|0.24|ENSG00000176454|chr15:34365170-34365173|AGCC/-|frameshift_variant	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	504.35242	1006.69029	2.9969	0.0015115	0.033998	1.7147E-05	3.0309	0.0015287	504.35208509582515	74.913	0.1861	75.238	75.143	75.329	0.32464	0.14504	0.0001267	NaN	57.471	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	452160			18499	4411	8925	8964							0.18720964030080722
LLAPVAAPA	9	Unmodified	_LLAPVAAPA_					0	0	0		ENSG00000118849|ENST00000237696|RARRES1;ENST00000498640.1_1_3:158422689-158450240:-|nuORF;nc|ENSG00000118849|P49788-2|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	822.5107910037041	1	822.508366	821.501089	1.6988	0.0013973	-0.25179	-0.0002071	1.447	0.0011902	822.5084452104725	41.974	0.18088	43.314	43.201	43.382	1.3399					8	5	2	0	0	0	0.16975	1	17617	17617		36.466	8.2929	1	353340			18500	2048	8926	8965	21436	21436					0.08319891736744012
LLAPVRGRGRT	11	Unmodified	_LLAPVRGRGRT_					0	0	0		ENST00000388988.8_1_15:78799912-78805465:+|nuORF	ENST00000388988.8_1_15:78799912-78805465:+|nuORF	ENST00000388988.8_1_15:78799912-78805465:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2514526247978	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.153	1	85.341	84.841	85.841	1.1879								0	0	0	0.63775	1	35313	35313		0.50596	0.051438	1				18501	6242	8927	8966	21437	21437					0.14134698402403956
LLAPVVKEI	9	Unmodified	_LLAPVVKEI_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.3221618533134	2	491.320786	980.627018	2.442	0.0011998	-0.14627	-7.1866E-05	2.2957	0.0011279	491.32056467571186	46.839	0.27149	47.169	46.961	47.233	0.33034					14	8	2	0	0	0	0.40005	1	19624	19624		20.415	0	1	679130			18502	3119;7040	8928	8967	21438	21438					0.1359297852217196
LLAPVVKEI	9	Unmodified	_LLAPVVKEI_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.3220397830009	2	491.320786	980.627018	2.4833	0.0012201	0.84869	0.00041698	3.332	0.0016371	491.32103091823046	45.152	0.32301	46.517	46.337	46.66	1.3653					21	9	3	0	0	0	0.075994	2	18900	18900;18952		57.722	0	1	3082400			18503	3119;7040	8928	8967	21439;21440	21439					0.1359297852217196
LLAPVVKEI	9	Unmodified	_LLAPVVKEI_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENST00000512383.1_1_5:75964652-75969784:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3221313357353	2	491.320786	980.627018	2.1667	0.0010645	0.94287	0.00046325	3.1095	0.0015278	491.3213012626748	44.63	0.38527	46.59	46.382	46.767	1.9596					24	11	3	0	0	0	0.16939	1	18726	18726		36.506	0	1	3044800			18504	3119;7040	8928	8967	21441	21441					0.1359297852217196
LLAQIIQLT	9	Unmodified	_LLAQIIQLT_					0	0	0			REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8251830935478	2	506.823692	1011.63283	2.6545	0.0013454	0.43756	0.00022177	3.092	0.0015671	506.8240505757271	44.257	0.25657	45.611	45.47	45.727	1.3536					19	7	3	0	0	0	0.39674	1	18538	18538		27.629	1.2875	1	2507800	+		18505	15743	8929	8968	21442	21442					0.1274807703384795
LLASCIWMS	9	Unmodified	_LLASCIWMS_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|344|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|344|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|344|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2546874880791	2	512.253731	1022.49291	1.241	0.0006357	-1.1181	-0.00057277	0.12286	6.2935E-05	512.2535422743896	32.191	1.0543	34.015	33.577	34.631	1.8246					143	41	5	0	0	0	0.34572	1	13508	13508		23.148	2.6948	1	23107000			18506	7750	8930	8969	21443	21443					-0.017437465665352647
LLASEGAHVVL	11	Unmodified	_LLASEGAHVVL_					0	0	0		tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3254882693291	2	554.821681	1107.62881	3.7258	0.0020671	1.8436	0.0010229	5.5694	0.00309	555.3231702013361	96.808	0.11832	97.092	97.016	97.134	0.28442					6	3	2	0	0	0	0.81656	1	40738	40738		14.838	1.7958	1	2564400			18507	16367	8931	8970	21444	21444					0.07929987540137517
LLASEGAHVVL	11	Unmodified	_LLASEGAHVVL_					0	0	0		tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	tr|A0A553SM50|A0A553SM50_NIACIBifunctionalaldolase/short-chaindehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_21905PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	554.821681	1107.62881	1.0086	0.00055959	-1.0778	-0.00059798	-0.069193	-3.839E-05	555.3218353673885	97.123	0.14822	97.123	97.049	97.197	0	0.015263	-0.0014427	NaN	14.838	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	940800			18508	16367	8931	8970							0.07929987540137517
LLASIPPPTP	10	Unmodified	_LLASIPPPTP_					0	0	0			REV__ENST00000397515.6_1_16:1362453-1362528:+|nuORF	REV__ENST00000397515.6_1_16:1362453-1362528:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3024474978447	2	503.302593	1004.59063	0.75222	0.00037859	0.40228	0.00020247	1.1545	0.00058106	503.3029214646913	55.91	0.4	57.879	57.717	58.117	1.9684					23	12	3	0	0	0	0.22411	1	23454	23454		46.021	0	1	3471500	+		18509	12864	8932	8971	21445	21445					0.08852101625450359
LLASQLEEI	9	Unmodified	_LLASQLEEI_					0	0	0		LUZP1|p.P700Afs*20|1|0.05|ENSG00000169641|chr1:23092164-23092165|-/GC|frameshift_variant;LUZP1|p.R817Sfs*50|1|0.07|ENSG00000169641|chr1:23091811-23091811|C/-|frameshift_variant;nc|ENSG00000169641|Q86V48-2|LUZP1;LUZP1|p.S996Rfs*52|1|0.05|ENSG00000169641|chr1:23091274-23091275|-/T|frameshift_variant;nc|ENSG00000169641|Q86V48-3|LUZP1;ENSG00000169641|ENST00000302291|LUZP1	LUZP1|p.P700Afs*20|1|0.05|ENSG00000169641|chr1:23092164-23092165|-/GC|frameshift_variant	LUZP1|p.P700Afs*20|1|0.05|ENSG00000169641|chr1:23092164-23092165|-/GC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2880126833916	2	508.28714	1014.55973	2.3199	0.0011792	0.5213	0.00026497	2.8412	0.0014441	508.28735477573747	69.064	0.45769	70.429	70.187	70.645	1.3657					35	14	4	0	0	0	0.37357	1	28994	28994		21.747	0	1	5497400			18510	4103	8933	8972	21446	21446					0.05302903520566815
LLATPAAVS	9	Unmodified	_LLATPAAVS_					0	0	0		ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7526733279228	2	421.752736	841.490919	1.6169	0.00068193	-2.9529	-0.0012454	-1.336	-0.00056346	421.75163931795305	68.619	0.36581	70.472	70.313	70.679	1.853					16	11	2	0	0	0	0.68551	1	28791	28791		7.9102	2.1497	1	948690			18511	1972	8934	8973	21447	21447					0.06383284011519663
LLATQKDV	8	Unmodified	_LLATQKDV_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	444.4060851931572	2	444.263468	886.512382	3.2411	0.0014399	3.9701	0.0017638	7.2112	0.0032037	444.265501685301	109.16	0.47002	109.21	108.91	109.38	0.048843					31	20	2	0	0	0	2.3239	1	47135	47135		5.2307	1.2863	1	6352200	+		18512	10899	8935	8974	21448	21448					0.06458669040239329
LLATQKDV	8	Unmodified	_LLATQKDV_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	444.3330871462822	2	444.263468	886.512382	3.3718	0.001498	2.6691	0.0011858	6.0409	0.0026837	444.26491707211943	109.13	0.53126	109.29	108.99	109.52	0.15899					34	25	2	0	0	0	2.3239	1	47195	47195		5.2307	0.90143	1	7545500	+		18513	10899	8935	8974	21449	21449					0.06458669040239329
LLATQKDV	8	Unmodified	_LLATQKDV_					0	0	0			REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	REV__ENST00000514380.5_1_4:26322378-26431729:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	444.3325988650322	2	444.263468	886.512382	3.3711	0.0014977	2.5539	0.0011346	5.925	0.0026323	444.2652603275486	108.98	0.53436	109.13	108.98	109.51	0.1548					41	25	2	0	0	0	2.3239	1	47324	47324		2.3027	0.4585	1	6868100	+		18514	10899	8935	8974	21450	21450					0.06458669040239329
LLAVSHVG	8	Unmodified	_LLAVSHVG_					0	0	0		ENST00000536811.5_1_17:18058633-18060585:+|nuORF;nc|ENSG00000091536|Q9UKN7-2|MYO15A;ENSG00000091536|ENST00000647165|MYO15A	ENST00000536811.5_1_17:18058633-18060585:+|nuORF	ENST00000536811.5_1_17:18058633-18060585:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.2396423220634	2	398.239796	794.465038	-0.16326	-6.5018E-05	0.24138	9.6126E-05	0.078114	3.1108E-05	398.2398881467625	16.27	0.15792	17.097	17.009	17.166	0.82643					14	7	2	0	0	0	0.74212	1	6754	6754		26.341	0	1	1443500			18515	1152	8936	8975	21451	21451					0.05958434559909165
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.1923095583916	3	304.191783	909.553519	0.082633	2.5136E-05	2.3572	0.00071704	2.4398	0.00074217	304.192604362575	28.751	1.1192	30.55	30.236	31.356	1.7987					76	36	4	0	0	0	0.77526	1	11971	11971		2.4985	0	1	22838000			18516	7222	8937	8976	21452	21452					0.09512430079701062
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	304.191783	909.553519	0.461	0.00014023	3.4765	0.0010575	3.9375	0.0011978	304.1929294522246	30.518	1.125	30.804	30.53	31.655	0.2859	0.15471	0.00034122	NaN	2.4985	75	37	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19225000			18517	7222	8937	8976							0.09512430079701062
LLAVTSLPP	9	Unmodified	_LLAVTSLPP_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.191783	909.553519	-0.34651	-0.0001054	3.4329	0.0010442	3.0864	0.00093884	304.19291243056836	29.312	0.97446	30.594	30.312	31.287	1.2825	-0.054947	0.00030137	NaN	2.4985	66	31	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24268000			18518	7222	8937	8976							0.09512430079701062
LLCAIGSLLV	10	Unmodified	_LLCAIGSLLV_					0	0	0		ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3044006228447	2	501.306821	1000.59909	1.8168	0.00091078	-1.2201	-0.00061164	0.59671	0.00029913	501.3054150749904	57.338	0.37126	57.338	57.192	57.564	0					28	15	3	0	0	0	0.09859	1	23906	23906		64.236	6.5143	1	4457200			18519	5965	8938	8977	21453	21453					0.09881332270447274
LLCAIGSLLV	10	Unmodified	_LLCAIGSLLV_					0	0	0		ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3089782595634	2	501.306821	1000.59909	2.806	0.0014066	0.98333	0.00049295	3.7893	0.0018996	501.30692851678924	56.826	0.32737	57.147	56.962	57.29	0.32103					23	10	3	0	0	0	0.04351	2	23800	23800;23847		81.613	17.377	1	7498600			18520	5965	8938	8977	21454;21455	21454					0.09881332270447274
LLCAIGSLLV	10	Unmodified	_LLCAIGSLLV_					0	0	0		ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3060790896416	2	501.306821	1000.59909	1.0225	0.0005126	-1.484	-0.00074393	-0.46145	-0.00023133	501.3060583111504	55.62	0.38786	57.03	56.822	57.21	1.4099					35	17	3	0	0	0	0.04351	2	23342	23251;23342		92.822	7.1903	1	31717000			18521	5965	8938	8977	21456;21457	21457					0.09881332270447274
LLCAIGSLLV	10	Unmodified	_LLCAIGSLLV_					0	0	0		ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	ENST00000346693.8_1_X:149937386-149937416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3073913455009	2	501.306821	1000.59909	0.10513	5.2702E-05	-0.63949	-0.00032058	-0.53436	-0.00026788	501.3064378851254	55.06	0.50879	57.028	56.695	57.203	1.9684					46	19	4	0	0	0	0.04351	2	23100	23050;23100		81.613	2.0168	1	23253000			18522	5965	8938	8977	21458;21459	21459					0.09881332270447274
LLCDKGSHPF	10	Unmodified	_LLCDKGSHPF_					0	0	0			REV__nc|nan|Q96EF9|ZHX1-C8orf76	REV__nc|nan|Q96EF9|ZHX1-C8orf76	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	558.2359496951103	2	558.778959	1115.54336	3.4147	0.001908	1.0703	0.00059805	4.485	0.0025061	559.2790733875017	74.276	0.1208	75.594	75.53	75.651	1.318					5	3	2	0	0	0	0.12484	1	31151	31151		3.9444	0	1	367880	+		18523	11612	8939	8978	21460	21460					-0.009785009171764614
LLCFCLSVP	9	Unmodified	_LLCFCLSVP_					0	0	0		L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|295|2|anti-sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|295|2|anti-sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|295|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.7602416872978	2	497.758649	993.502746	2.3369	0.0011632	2.6359	0.001312	4.9728	0.0024752	497.7599767618236	51.047	0.31428	51.375	51.166	51.48	0.32824					23	9	3	0	0	0	0.3154	1	21352	21352		24.674	7.7316	1	1854600			18524	7746	8940	8979	21461	21461					0.0057344143883710785
LLCHRGLLW	9	Unmodified	_LLCHRGLLW_					0	0	0		ENST00000452737.5_1_22:24052038-24057262:-|nuORF	ENST00000452737.5_1_22:24052038-24057262:-|nuORF	ENST00000452737.5_1_22:24052038-24057262:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.2887451052666	2	555.815679	1109.6168	2.0485	0.0011386	-2.7522	-0.0015297	-0.7037	-0.00039113	555.8137009045889	50.521	0.36847	51.915	51.709	52.078	1.3938					15	11	2	0	0	0	0.10591	1	21096	21096		18.135	2.3668	1	3144800			18525	6618	8941	8980	21462	21462					0.0663809231596133
LLCKKLFI	8	Unmodified	_LLCKKLFI_					0	0	0			REV__nc|ENSG00000140471|Q8NG48-3|LINS1	REV__nc|ENSG00000140471|Q8NG48-3|LINS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.3162414431572	2	489.314449	976.614345	2.5513	0.0012484	-0.94021	-0.00046006	1.6111	0.00078834	489.3139544120919	77.992	0.60844	79.273	78.918	79.527	1.2809					68	19	5	0	0	0	0.89198	2	32625	32625;32773		0	0	1	74892000	+		18526	10126	8942	8981	21463;21464	21463					0.1251024385827577
LLCLPWLQEAG	11	Unmodified	_LLCLPWLQEAG_					0	0	0		CSHL1|p.K101Nfs*4|1|0.05|ENSG00000204414|chr17:63910426-63910426|C/-|frameshift_variant;nc|ENSG00000213218|P0DML3-3|CSH2;nc|ENSG00000213218|P0DML3-2|CSH2;nc|ENSG00000204414|Q14406-2|CSHL1;ENSG00000213218|ENST00000392886|CSH2;ENSG00000136488|ENST00000316193|CSH1;ENSG00000204414|ENST00000309894|CSHL1	CSHL1|p.K101Nfs*4|1|0.05|ENSG00000204414|chr17:63910426-63910426|C/-|frameshift_variant	CSHL1|p.K101Nfs*4|1|0.05|ENSG00000204414|chr17:63910426-63910426|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8338500857353	2	621.831191	1241.64783	2.4514	0.0015244	-1.1613	-0.00072213	1.2901	0.00080224	621.8303607321859	82.987	0.27229	84.199	84.046	84.319	1.2125					23	8	4	0	0	0	0.92747	1	34835	34835		8.1555	0.24537	1	1093700			18527	378	8943	8982	21465	21465					0.036672008395271405
LLCNASSKLL	10	Unmodified	_LLCNASSKLL_					0	0	0		tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3044311404228	2	531.30481	1060.59507	1.6879	0.00089681	-3.1099	-0.0016523	-1.422	-0.00075552	531.3028590748439	71.221	0.53108	73.045	72.787	73.318	1.824					34	15	3	0	0	0	0.81324	1	29971	29971		10.824	1.4765	1	8621900			18528	16727	8944	8983	21466	21466					0.0671924277673952
LLCPAGRLPRR	11	Unmodified	_LLCPAGRLPRR_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6927062869072	4	313.692121	1250.73938	0.46248	0.00014508	1.75	0.00054896	2.2125	0.00069404	313.6925895170379	30.427	0.73331	30.713	30.501	31.234	0.2859					103	24	5	0	0	0	0.96769	2	12811	12709;12811		4.7159	3.5011	1	22074000			18529	7358	8945	8984	21467;21468	21468					0.12403929047354723
LLCPAGRLPRR	11	Unmodified	_LLCPAGRLPRR_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9210082888603	3	417.920403	1250.73938	0.77487	0.00032383	2.9967	0.0012524	3.7715	0.0015762	417.92076908504407	29.26	0.63719	30.542	30.343	30.98	1.2825					65	20	4	0	0	0	1.0131	1	12291	12291		1.2148	0	1	5728000			18530	7358	8945	8984	21469	21469					0.12403929047354723
LLCPAGRLPRR	11	Unmodified	_LLCPAGRLPRR_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6925536990166	4	313.692121	1250.73938	-0.34987	-0.00010975	1.482	0.00046489	1.1321	0.00035514	313.6925053445977	29.257	0.66803	30.54	30.312	30.98	1.2825					91	21	5	0	0	0	1.0084	2	12355	12355;12404		2.8433	0.93691	1	24092000			18531	7358	8945	8984	21470;21471	21470					0.12403929047354723
LLCPAGRLPRR	11	Unmodified	_LLCPAGRLPRR_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6925231814384	4	313.692121	1250.73938	-0.40732	-0.00012777	2.0914	0.00065605	1.6841	0.00052828	313.6926688771961	29.894	0.58349	31.176	30.98	31.564	1.2825					66	18	5	0	0	0	1.0084	1	12536	12536		1.3296	0	1	19826000			18532	7358	8945	8984	21472	21472					0.12403929047354723
LLCPAGRLPRR	11	Unmodified	_LLCPAGRLPRR_					0	0	0		ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	ENST00000566104.1_1_16:67189803-67193780:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6919128298759	4	313.692121	1250.73938	0.11039	3.4628E-05	-0.018021	-5.6531E-06	0.092366	2.8974E-05	313.691993126686	29.416	0.48679	31.215	31.02	31.506	1.7987					55	15	5	0	0	0	1.0084	1	12321	12321		1.3296	0	1	16906000			18533	7358	8945	8984	21473	21473					0.12403929047354723
LLCPLCCH	8	Unmodified	_LLCPLCCH_					0	0	0			REV__nc|ENSG00000196083|Q9NPH3-3|IL1RAP	REV__nc|ENSG00000196083|Q9NPH3-3|IL1RAP	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415893435478	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8983	1	3.6467	3.1467	4.1467	0.7484								0	0	0	1.0178	1	1203	1203		0.45834	0	1		+		18534	14517	8946	8985	21474	21474					-0.052199138156652225
LLCPLCCH	8	Unmodified	_LLCPLCCH_					0	0	0			REV__nc|ENSG00000196083|Q9NPH3-3|IL1RAP	REV__nc|ENSG00000196083|Q9NPH3-3|IL1RAP	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1410095095634	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3572	1	9.0917	8.5917	9.5917	0.73452								0	0	0	1.0178	1	3473	3473		0.45834	0	1		+		18535	14517	8946	8985	21475	21475					-0.052199138156652225
LLCQPLGEP	9	Unmodified	_LLCQPLGEP_					0	0	0		nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.5103027224541	1	969.50738	968.500103	1.5149	0.0014687	1.042	0.0010102	2.5569	0.0024789	969.5079474253746	42.195	0.93686	43.534	43.171	44.108	1.3399					56	29	3	0	0	0	0.77526	3	17616	17616;17735;17789		4.3292	1.44	1	1098700			18536	7812	8947	8986	21476;21477;21478	21476					0.014593093055395912
LLCQPLGEP	9	Unmodified	_LLCQPLGEP_					0	0	0		nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2591735720634	2	485.257328	968.500103	1.9452	0.00094394	0.49972	0.00024249	2.445	0.0011864	485.2576060170659	42.152	1.6756	43.492	42.987	44.663	1.3399					99	53	2	0	0	0	0.68551	1	17879	17879		7.9102	2.1497	1	6327100			18537	7812	8947	8986	21479	21479					0.014593093055395912
LLCQPLGEP	9	Unmodified	_LLCQPLGEP_					0	0	0		nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	nc|ENSG00000008323|Q3KR16-3|PLEKHG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	969.5109741091728	1	969.50738	968.500103	1.5886	0.0015401	0.49586	0.00048074	2.0844	0.0020209	969.5077622737767	41.804	0.93997	43.697	43.384	44.324	1.8927					50	29	3	0	0	0	0.77526	2	17513	17513;17629		4.3292	1.44	1	1221700			18538	7812	8947	8986	21480;21481	21480					0.014593093055395912
LLCQPSCSHM	10	Unmodified	_LLCQPSCSHM_					0	0	0		ENST00000481244.5_1_10:28491134-28569058:-|nuORF	ENST00000481244.5_1_10:28491134-28569058:-|nuORF	ENST00000481244.5_1_10:28491134-28569058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.7424804568291	2	559.743205	1117.47186	2.4407	0.0013662	-3.1492	-0.0017628	-0.70857	-0.00039662	559.7413664176661	65.73	0.75681	67.129	66.849	67.606	1.3989					93	24	6	0	0	0	0.82659	1	27583	27583		9.3831	0	1	4146600			18539	6823	8948	8987	21482	21482					-0.08218079937705625
LLCRTKYLPA	10	Unmodified	_LLCRTKYLPA_					0	0	0			REV__ENST00000548115.5_1_12:51566161-51566329:-|nuORF	REV__ENST00000548115.5_1_12:51566161-51566329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3435546755791	2	589.341726	1176.6689	2.0327	0.0011979	0.87386	0.000515	2.9065	0.0017129	589.3421321319817	74.901	2.0207	74.901	74.206	76.226	0					125	63	3	0	0	0	0.87762	1	31289	31289		7.2892	5.445	1	2129700	+		18540	13813	8949	8988	21483	21483					0.08763210939059718
LLCRTKYLPA	10	Unmodified	_LLCRTKYLPA_					0	0	0			REV__ENST00000548115.5_1_12:51566161-51566329:-|nuORF	REV__ENST00000548115.5_1_12:51566161-51566329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3443481326103	2	589.341726	1176.6689	2.4806	0.0014619	1.5842	0.00093366	4.0649	0.0023956	589.3424543925346	74.696	1.4803	75.021	74.201	75.681	0.32463					106	46	3	0	0	0	0.89422	1	31479	31479		4.3292	2.485	1	2982700	+		18541	13813	8949	8988	21484	21484					0.08763210939059718
LLCRWDKRRWR	11	Unmodified	_LLCRWDKRRWR_					0	0	0		nc|ENSG00000168539|P11229-2|CHRM1;ENSG00000168539|ENST00000306960|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.9644653201103	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.235	1	44.235	43.735	44.735	0								0	0	0	0.63775	1	18510	18510		0.45452	0	1				18542	4040	8950	8989	21485	21485					0.10289168153053652
LLCRWDKRRWR	11	Unmodified	_LLCRWDKRRWR_					0	0	0		nc|ENSG00000168539|P11229-2|CHRM1;ENSG00000168539|ENST00000306960|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	nc|ENSG00000168539|P11229-2|CHRM1	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.9643432497978	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.283	1	63.283	62.783	63.783	0								0	0	0	0.63775	1	26383	26383		1.3296	0	1				18543	4040	8950	8989	21486	21486					0.10289168153053652
LLCRWMPERS	10	Unmodified	_LLCRWMPERS_					0	0	0		ENST00000569680.1_1_15:74836266-74836383:+|nuORF	ENST00000569680.1_1_15:74836266-74836383:+|nuORF	ENST00000569680.1_1_15:74836266-74836383:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8888427615166	3	430.88637	1289.63728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.522	1	77.839	77.339	78.339	0.31653								0	0	0	0.66141	1	32418	32418		2.086	0.17963	1				18544	7383	8951	8990	21487	21487					0.0040489491345852
LLCRYKRL	8	Unmodified	_LLCRYKRL_					0	0	0			REV__ENST00000336079.7_1_Y:15027660-15027840:+|nuORF	REV__ENST00000336079.7_1_Y:15027660-15027840:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.2832519412041	2	532.823504	1063.63245	1.8597	0.00099087	2.0736	0.0011048	3.9332	0.0020957	532.8232207931943	67.044	0.37503	68.432	68.121	68.496	1.3888					16	11	2	0	0	0	2.3239	1	27995	27995		6.3541	0	1	520390	+		18545	12467	8952	8991	21488	21488					0.10318378832994313
LLCRYKRL	8	Unmodified	_LLCRYKRL_					0	0	0			REV__ENST00000336079.7_1_Y:15027660-15027840:+|nuORF	REV__ENST00000336079.7_1_Y:15027660-15027840:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	532.823504	1063.63245	1.8602	0.00099117	3.5156	0.0018732	5.3759	0.0028644	532.8238078558217	66.492	0.34447	68.381	68.182	68.527	1.8889	-0.025491	0.00051621	NaN	6.3541	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	496420	+		18546	12467	8952	8991							0.10318378832994313
LLCSEQGGPA	10	Unmodified	_LLCSEQGGPA_					0	0	0		ENST00000469750.5_1_7:2580597-2582612:-|nuORF	ENST00000469750.5_1_7:2580597-2582612:-|nuORF	ENST00000469750.5_1_7:2580597-2582612:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7354308962822	2	487.734217	973.453881	1.9428	0.00094759	1.3681	0.00066727	3.3109	0.0016149	487.73469366099437	42.142	1.3138	43.482	43.171	44.485	1.3399					70	41	2	0	0	0	0.78468	1	17901	17901		13.906	2.7916	1	1662300			18547	6730	8953	8992	21489	21489					-0.03390755596547024
LLCWNYLV	8	Unmodified	_LLCWNYLV_					0	0	0			REV__ENSG00000183862|ENST00000329903|CNGA2	REV__ENSG00000183862|ENST00000329903|CNGA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.2703735232353	2	512.270238	1022.52592	1.9319	0.00098968	-2.3166	-0.0011867	-0.38464	-0.00019704	512.2688352311374	79.466	0.50951	79.766	79.59	80.1	0.30047					35	15	3	0	0	0	0.88409	1	33220	33220		6.3541	0.59368	1	1291200	+		18548	11407	8954	8993	21490	21490					0.01556203547829682
LLDAFCRR	8	Unmodified	_LLDAFCRR_					0	0	0			REV__ENST00000206423.7_2_3:112359909-112359948:-|nuORF	REV__ENST00000206423.7_2_3:112359909-112359948:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2679626345634	2	497.268561	992.52257	0.43644	0.00021703	-1.1932	-0.00059333	-0.75673	-0.0003763	497.26802098939237	16.932	0.65738	16.932	16.659	17.316	0					46	20	3	0	0	0	0.87935	1	6997	6997		9.3474	0.75416	1	1155800	+		18549	12058	8955	8994	21491	21491					0.026009534938225443
LLDAPLGGPL	10	Unmodified	_LLDAPLGGPL_					0	0	0		WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant;nc|ENSG00000011451|O95785|WIZ;ENSG00000011451|ENST00000673675|WIZ;ENST00000595214.2_1_19:15547509-15549737:-|nuORF	WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant	WIZ|p.A336Gfs*19|1|0.29|ENSG00000011451|chr19:15427058-15427059|-/TTGACCTCTGCTGGGAGGAGGCGGTCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2882568240166	2	483.286943	964.559333	2.9127	0.0014077	0.024414	1.1799E-05	2.9371	0.0014195	483.2869253301448	82.46	0.18692	84.13	84.049	84.236	1.67					6	5	2	0	0	0	0.80568	1	34596	34596		11.64	0	1	1972200			18550	572	8956	8995	21492	21492					0.07563528591401791
LLDDIFAQL	9	Unmodified	_LLDDIFAQL_					0	0	0		ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.8179809451103	2	524.289682	1046.56481	4.2195	0.0022122	-3.698	-0.0019388	0.52143	0.00027338	524.2872531883768	91.239	0.31384	92.221	92.039	92.353	0.98157					16	9	2	0	0	0	0.08828	1	38463	38463		28.487	11.545	1	909500			18551	812	8957	8996	21493	21493					0.04339207383191024
LLDDIFAQL	9	Unmodified	_LLDDIFAQL_					0	0	0		ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.8182861208916	2	524.289682	1046.56481	3.63	0.0019032	0.94919	0.00049765	4.5792	0.0024008	524.2904530953209	90.899	0.37882	92.265	92.06	92.438	1.366					19	11	2	0	0	0	0.078322	1	38239	38239		34.102	15.967	1	1157000			18552	812	8957	8996	21494	21494					0.04339207383191024
LLDDIFAQL	9	Unmodified	_LLDDIFAQL_					0	0	0		ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	ENSG00000066777|ENST00000262215|ARFGEF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	524.289682	1046.56481	2.8283	0.0014828	0.52788	0.00027676	3.3562	0.0017596	524.2901258629688	92.004	0.28716	92.195	92.08	92.367	0.19041	-0.032024	0.0018029	NaN	34.102	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286580			18553	812	8957	8996							0.04339207383191024
LLDDLNPDNTE	11	Unmodified	_LLDDLNPDNTE_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2005798220634	3	420.198102	1257.57248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.68	1	102.75	102.25	103.25	0.062805								0	0	0	0.63775	1	43019	43019		1.1098	0	1		+		18554	8636	8958	8997	21495	21495					-0.04600729877847698
LLDDSLVSI	9	Unmodified	_LLDDSLVSI_					0	0	0		nc|ENSG00000126432|P30044-4|PRDX5;nc|ENSG00000126432|P30044-2|PRDX5;nc|ENSG00000126432|P30044-3|PRDX5;PRDX5|p.L178Pfs*12|1|0.09|ENSG00000126432|chr11:64321062-64321062|T/-|frameshift_variant;ENSG00000126432|ENST00000265462|PRDX5	nc|ENSG00000126432|P30044-4|PRDX5	nc|ENSG00000126432|P30044-4|PRDX5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5389282107353	1	974.540454	973.533177	1.5569	0.0015172	-3.3528	-0.0032675	-1.7959	-0.0017502	974.5378303056989	70.461	0.3875	70.461	70.179	70.567	0					17	12	2	0	0	0	0.12174	1	29328	29328		42.095	0	1	871730			18555	2307	8959	8998	21496	21496					0.04535214629231632
LLDEISTCH	9	Unmodified	_LLDEISTCH_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	515.3146850466728	2	515.747324	1029.4801	3.54	0.0018257	-2.663	-0.0013735	0.87694	0.00045228	515.7459899808168	81.315	0.49491	82.548	82.348	82.842	1.2332					26	15	2	0	0	0	0.10844	1	34258	34258		16.942	2.3606	1	1061900			18556	1324	8960	8999	21497	21497					-0.033464864250845494
LLDEWFTL	8	Unmodified	_LLDEWFTL_					0	0	0		ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1397582888603	2	518.771126	1035.5277	3.7	0.0019194	-3.0446	-0.0015795	0.65535	0.00033998	519.2703792846056	81.475	0.30642	83.171	83.014	83.32	1.6959					16	9	2	0	0	0	2.3239	1	34156	34156		5.7604	0	1	727850			18557	2025	8961	9000	21498	21498					0.01135535837443058
LLDFERSL	8	Unmodified	_LLDFERSL_					0	0	0		ENSG00000130829|ENST00000342782|DUSP9;ENSG00000163755|ENST00000296051|HPS3;nc|ENSG00000163755|Q969F9-2|HPS3;ENST00000486530.1_1_3:148847510-148871436:+|nuORF	ENSG00000130829|ENST00000342782|DUSP9;ENSG00000163755|ENST00000296051|HPS3	ENSG00000163755|ENST00000296051|HPS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7766296267509	2	496.7742	991.533846	2.23	0.0011078	-0.32238	-0.00016015	1.9076	0.00094763	496.77431212102965	70.126	0.4166	71.963	71.751	72.167	1.8378					37	12	4	0	0	0	0.87803	1	29371	29371		10.183	0	1	6384800			18558	3722;2467	8962	9001	21499	21499					0.037740540689469526
LLDGTNFFV	9	Unmodified	_LLDGTNFFV_					0	0	0			REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.7886230349541	2	513.26875	1024.52295	3.2792	0.0016831	-0.1729	-8.8745E-05	3.1063	0.0015944	513.2686631798681	63.829	0.36845	65.757	65.489	65.857	1.928					18	11	2	0	0	0	0.116	1	26812	26812		9.3474	0.75416	1	2364500	+		18559	10216	8963	9002	21500	21500					0.011666516946661432
LLDGTVFEI	9	Unmodified	_LLDGTVFEI_					0	0	0		nc|ENSG00000183628|Q14129-2|DGCR6;ENSG00000183628|ENST00000331444|DGCR6;ENSG00000128185|ENST00000248879|DGCR6L	nc|ENSG00000183628|Q14129-2|DGCR6	nc|ENSG00000183628|Q14129-2|DGCR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.550524890423	1	1006.54554	1005.53826	2.8407	0.0028593	1.4728	0.0014824	4.3135	0.0043417	1006.5463103223943	79.781	0.43227	81.032	80.8	81.232	1.2512					26	13	3	0	0	0	0.051699	1	33506	33506		67.344	9.8725	1	2382900			18560	2358	8964	9003	21501	21501					0.03571518491855841
LLDHELPQCF	10	Unmodified	_LLDHELPQCF_					0	0	0			REV__SHROOM3|p.S620Qfs*25|1|0.54|ENSG00000138771|chr4:76740028-76740037|TCTTCCAGGC/-|frameshift_variant	REV__SHROOM3|p.S620Qfs*25|1|0.54|ENSG00000138771|chr4:76740028-76740037|TCTTCCAGGC/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.3694335818291	2	607.797349	1213.58014	4.624	0.0028105	3.4443	0.0020935	8.0684	0.0049039	607.7993249545545	86.969	0.83212	88.464	88.151	88.983	1.4953					54	26	3	0	0	0	0.12525	1	36582	36582		3.5965	0	1	1792700	+		18561	10081	8965	9004	21502	21502					-0.01810249091249716
LLDIAPHAI	9	Unmodified	_LLDIAPHAI_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7874633669853	2	481.78711	961.559667	2.1832	0.0010518	-0.99182	-0.00047785	1.1914	0.000574	481.7867651903289	51.086	0.31661	51.086	50.944	51.261	0					15	9	2	0	0	0	0.15478	1	21304	21304		38.151	7.9264	1	938550			18562	3279;6660	8966	9005	21503	21503					0.07734948311224343
LLDIAPHAI	9	Unmodified	_LLDIAPHAI_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.7882568240166	2	481.78711	961.559667	2.5161	0.0012122	-0.31569	-0.0001521	2.2004	0.0010601	481.78739404618204	50.589	0.21867	50.917	50.793	51.012	0.32824					11	6	2	0	0	0	0.15478	1	21184	21184		38.151	5.8457	1	838370			18563	3279;6660	8966	9005	21504	21504					0.07734948311224343
LLDIAPHAI	9	Unmodified	_LLDIAPHAI_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7886230349541	2	481.78711	961.559667	1.9944	0.00096086	0.1219	5.8728E-05	2.1163	0.0010196	481.78759251973196	49.34	0.34051	50.731	50.548	50.888	1.3911					17	10	2	0	0	0	0.078975	2	20684	20633;20684		56.541	9.6204	1	1811500			18564	3279;6660	8966	9005	21505;21506	21506					0.07734948311224343
LLDIAPHAI	9	Unmodified	_LLDIAPHAI_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000459739.5_1_10:79553706-79569486:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7886230349541	2	481.78711	961.559667	1.7533	0.00084471	-0.68639	-0.00033069	1.0669	0.00051402	481.7878506852859	48.753	0.34076	50.731	50.546	50.886	1.9772					23	10	3	0	0	0	0.078975	1	20422	20422		56.541	9.6204	1	1989200			18565	3279;6660	8966	9005	21507	21507					0.07734948311224343
LLDIFREFL	9	Unmodified	_LLDIFREFL_					0	0	0			REV__tr|A0A553SUA2|A0A553SUA2_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_06570PE=4SV=1	REV__tr|A0A553SUA2|A0A553SUA2_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_06570PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3365356326103	2	583.334424	1164.6543	1.7911	0.0010448	0.3101	0.00018089	2.1012	0.0012257	583.3345839628763	66.073	0.57691	66.073	65.708	66.285	0					52	17	4	0	0	0	0.18809	1	27431	27431		34.402	0	1	9078900	+		18566	15284	8967	9006	21508	21508					0.0785546206257095
LLDIGLITG	9	Unmodified	_LLDIGLITG_					0	0	0			REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	914.5563842654228	1	914.55571	913.548434	1.8941	0.0017323	-1.1748	-0.0010744	0.71934	0.00065787	914.5546283202723	66.942	0.58864	67.266	67.032	67.62	0.32449					26	19	2	0	0	0	0.19075	1	27979	27979		34.102	3.8776	1	1560500	+		18567	10152	8968	9007	21509	21509					0.08820126217096913
LLDIIKSTV	9	Unmodified	_LLDIIKSTV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3163635134697	2	501.3157	1000.61685	2.4182	0.0012123	-0.51966	-0.00026052	1.8985	0.00095175	501.31493284633507	53.742	0.248	54.064	53.913	54.161	0.32218					12	7	2	0	0	0	0.22861	1	22501	22501		29.841	6.0508	1	659380			18568	1782	8969	9008	21510	21510					0.11656370796958981
LLDIIKSTV	9	Unmodified	_LLDIIKSTV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3167297244072	2	501.3157	1000.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.576	1	45.905	45.405	46.405	0.32899								0	0	0	0.317	1	19133	19133		16.942	1.0951	1				18569	1782	8969	9008	21511	21511					0.11656370796958981
LLDIIKSTV	9	Unmodified	_LLDIIKSTV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3163329958916	2	501.3157	1000.61685	1.0289	0.00051578	0.72062	0.00036126	1.7495	0.00087704	501.31626069067664	52.58	0.28041	53.976	53.804	54.085	1.3966					15	8	2	0	0	0	0.046715	2	21998	21998;22050		70.332	8.7301	1	3287600			18570	1782	8969	9008	21512;21513	21512					0.11656370796958981
LLDIIKSTV	9	Unmodified	_LLDIIKSTV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3170959353447	2	501.3157	1000.61685	1.124	0.00056348	0.48645	0.00024387	1.6105	0.00080735	501.3160379742994	51.997	0.30731	53.969	53.831	54.138	1.9722					17	9	2	0	0	0	0.060242	2	21775	21775;21840		63.961	8.4578	1	3214100			18571	1782	8969	9008	21514;21515	21514					0.11656370796958981
LLDIIKSTV	9	Unmodified	_LLDIIKSTV_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	501.3157	1000.61685	1.8499	0.0009274	-0.0038646	-1.9374E-06	1.8461	0.00092546	501.3159550849052	54.324	0.20777	54.324	54.216	54.424	0	0.24096	-0.00029215	NaN	70.332	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719260			18572	1782	8969	9008							0.11656370796958981
LLDILLRTI	9	Unmodified	_LLDILLRTI_					0	0	0		nc|ENSG00000128512|Q8N1I0-2|DOCK4;nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4;DOCK4|p.F1456Lfs*4|1|0.11|ENSG00000128512|chr7:111755521-111755536|ACGCTTTTCCACTTCA/-|frameshift_variant	nc|ENSG00000128512|Q8N1I0-2|DOCK4	nc|ENSG00000128512|Q8N1I0-2|DOCK4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1631347537041	2	535.352617	1068.69068	1.9014	0.0010179	0.020143	1.0784E-05	1.9216	0.0010287	535.3525172248384	93.06	0.28106	93.06	92.921	93.202	0					13	8	2	0	0	0	0.11684	1	38864	38864		4.3292	0	1	554730			18573	2368	8970	9009	21516	21516					0.15908338959297907
LLDKLLTLMHL	11	Unmodified	_LLDKLLTLMHL_					0	0	0			REV__ENST00000479317.1_1_10:99147891-99148113:-|nuORF	REV__ENST00000479317.1_1_10:99147891-99148113:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2667724490166	3	437.268586	1308.78393	1.2901	0.00056411	-1.1424	-0.00049954	0.14765	6.4564E-05	437.2675329460279	42.015	0.85207	42.015	41.627	42.479	0					60	26	3	0	0	0	1.0118	1	17691	17691		3.0723	0.22898	1	1120900	+		18574	8625	8971	9010	21517	21517					0.14188895350184794
LLDLINSKL	9	Unmodified	_LLDLINSKL_					0	0	0			REV__tr|A0A7D6VZB4|A0A7D6VZB4_9CLOTHDODdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18985PE=4SV=1	REV__tr|A0A7D6VZB4|A0A7D6VZB4_9CLOTHDODdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18985PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8223754763603	2	514.82115	1027.62775	1.458	0.00075061	0.39599	0.00020386	1.854	0.00095447	514.8216041679115	71.102	0.42645	72.926	72.639	73.065	1.824					20	13	2	0	0	0	0.46905	1	29823	29823		16.942	0	1	4289100	+		18575	15565	8972	9011	21518	21518					0.11503773171239118
LLDLINSKL	9	Unmodified	_LLDLINSKL_					0	0	0			REV__tr|A0A7D6VZB4|A0A7D6VZB4_9CLOTHDODdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18985PE=4SV=1	REV__tr|A0A7D6VZB4|A0A7D6VZB4_9CLOTHDODdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18985PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	514.82115	1027.62775	2.1329	0.0010981	-0.42278	-0.00021766	1.7101	0.0008804	514.8210791471612	71.515	0.3411	72.857	72.689	73.03	1.3415	-0.034572	-0.00035117	NaN	16.942	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9118000	+		18576	15565	8972	9011							0.11503773171239118
LLDLKPELAAQ	11	Unmodified	_LLDLKPELAAQ_					0	0	0			REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.8576537966728	2	605.855721	1209.69689	1.9054	0.0011544	-0.092158	-5.5835E-05	1.8132	0.0010986	605.855620955848	69.978	0.50345	69.978	69.738	70.241	0					52	15	4	0	0	0	0.84637	1	29225	29225		13.042	4.2971	1	36754000	+		18577	9256	8973	9012	21519	21519					0.10042812400138246
LLDLKPELAAQ	11	Unmodified	_LLDLKPELAAQ_					0	0	0			REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.8571655154228	2	605.855721	1209.69689	1.2401	0.00075132	1.1489	0.00069605	2.389	0.0014474	605.8564204555154	69.541	0.50335	69.864	69.625	70.129	0.32223					55	15	5	0	0	0	0.84637	1	29189	29189		13.042	0.16986	1	30565000	+		18578	9256	8973	9012	21520	21520					0.10042812400138246
LLDLKPELAAQ	11	Unmodified	_LLDLKPELAAQ_					0	0	0			REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1210.706469714642	1	1210.70417	1209.69689	1.8235	0.0022077	0.16469	0.00019939	1.9882	0.0024071	1210.7035583645904	68.522	0.30276	69.888	69.694	69.997	1.3657					23	9	3	0	0	0	0.66268	1	28762	28762		19.362	3.2128	1	1771100	+		18579	9256	8973	9012	21521	21521					0.10042812400138246
LLDLKPELAAQ	11	Unmodified	_LLDLKPELAAQ_					0	0	0			REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1210.70417	1209.69689	1.8235	0.0022077	0.16469	0.00019939	1.9882	0.0024071	1210.7035583645904	68.522	0.30276	69.888	69.694	69.997	1.3657	-0.016631	5.8025E-05	NaN	19.362	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1771100	+		18580	9256	8973	9012							0.10042812400138246
LLDLKPELAAQ	11	Unmodified	_LLDLKPELAAQ_					0	0	0			REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	REV__ENST00000582482.1_1_17:46058511-46058865:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1210.70417	1209.69689	1.4807	0.0017927	0.73354	0.0008881	2.2143	0.0026808	1210.7055447343234	67.983	0.27507	69.853	69.704	69.979	1.87	-0.051315	0.00074674	NaN	19.362	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1450300	+		18581	9256	8973	9012							0.10042812400138246
LLDNLFFA	8	Unmodified	_LLDNLFFA_					0	0	0			REV__nc|ENSG00000116641|Q96N67-4|DOCK7	REV__nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2001525759697	2	476.760561	951.506569	1.7197	0.00081989	-3.5385	-0.001687	-1.8188	-0.00086712	476.75865520493204	50.157	0.33518	52.134	51.914	52.25	1.9772					16	10	2	0	0	0	2.3239	1	20947	20947		0.79363	0	1	1313000	+		18582	9476	8974	9013	21522	21522					0.028875705285713593
LLDPGRLRAR	10	Unmodified	_LLDPGRLRAR_					0	0	0			REV__ENST00000597230.2_1_19:58789893-58790073:-|nuORF	REV__ENST00000597230.2_1_19:58789893-58790073:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.8605224490166	2	583.859464	1165.70437	2.2884	0.0013361	-0.86666	-0.00050601	1.4217	0.00083007	583.8591925923532	83.083	0.5809	83.083	82.892	83.473	0					38	18	3	0	0	0	0.89803	1	34693	34693		1.6526	0.17072	1	1953200	+		18583	14097	8975	9014	21523	21523					0.1281500951106409
LLDPNVKSIFV	11	Unmodified	_LLDPNVKSIFV_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	622.8667480349541	2	622.866089	1243.71762	2.1779	0.0013565	-0.54882	-0.00034184	1.6291	0.0010147	622.8653629879439	64.915	0.28755	64.915	64.753	65.04	0					20	8	3	0	0	0	0.38904	1	27067	27067		27.223	12.385	1	1102400			18584	2008	8976	9015	21524	21524					0.10551402779788077
LLDPNVKSIFV	11	Unmodified	_LLDPNVKSIFV_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	622.8683959841728	2	622.866089	1243.71762	1.8107	0.0011278	0.7386	0.00046005	2.5493	0.0015879	622.8665339099691	64.385	0.29211	64.714	64.562	64.854	0.32899					19	8	3	0	0	0	0.13365	1	26974	26974		49.742	27.084	1	1196000			18585	2008	8976	9015	21525	21525					0.10551402779788077
LLDPNVKSIFV	11	Unmodified	_LLDPNVKSIFV_					0	0	0		nc|ENSG00000117419|O43414-3|ERI3;nc|ENSG00000117419|O43414-2|ERI3;ENSG00000117419|ENST00000372257|ERI3	nc|ENSG00000117419|O43414-3|ERI3	nc|ENSG00000117419|O43414-3|ERI3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.8678466677666	2	622.866089	1243.71762	2.6384	0.0016434	-0.92194	-0.00057424	1.7165	0.0010691	622.8660172406107	63.103	0.31469	64.516	64.344	64.659	1.4134					23	9	3	0	0	0	0.012482	1	26461	26461		104.48	64.245	1	3270700			18586	2008	8976	9015	21526	21526					0.10551402779788077
LLDPQQTLV	9	Unmodified	_LLDPQQTLV_					0	0	0		nc|ENSG00000168014|Q4AC94-2|C2CD3;nc|ENSG00000168014|Q4AC94-4|C2CD3;nc|ENSG00000168014|Q4AC94-1|C2CD3;nc|ENSG00000168014|Q4AC94-3|C2CD3;ENSG00000168014|ENST00000334126|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	nc|ENSG00000168014|Q4AC94-2|C2CD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.2352783083916	2	513.795132	1025.57571	2.5201	0.0012948	-1.1039	-0.00056717	1.4162	0.00072764	514.2979118845069	69.484	0.26848	70.849	70.701	70.969	1.3657					13	8	2	0	0	0	0.1006	1	29194	29194		10.824	0	1	518250			18587	4007	8977	9016	21527	21527					0.06394609757467151
LLDPRIYYI	9	Unmodified	_LLDPRIYYI_					0	0	0		ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	ENSG00000144063|ENST00000272462|MALL	ENSG00000144063|ENST00000272462|MALL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3353149294853	2	583.334424	1164.6543	1.7911	0.0010448	0.3101	0.00018089	2.1012	0.0012257	583.3345839628763	66.073	0.57691	66.073	65.708	66.285	0					52	17	4	0	0	0	0.066197	3	27480	27480;27518;27560		61.602	7.7691	1	9078900			18588	3066	8978	9017	21528;21529;21530	21528					0.07855462062548213
LLDPRIYYI	9	Unmodified	_LLDPRIYYI_					0	0	0		ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	ENSG00000144063|ENST00000272462|MALL	ENSG00000144063|ENST00000272462|MALL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3356201052666	2	583.334424	1164.6543	1.8142	0.0010583	0.45772	0.00026701	2.2719	0.0013253	583.3346804721954	65.518	0.63123	65.845	65.485	66.116	0.32689					58	19	4	0	0	0	0.046715	4	27441	27342;27388;27441;27489		70.332	9.5521	1	8243900			18589	3066	8978	9017	21531;21532;21533;21534	21533					0.07855462062548213
LLDPRIYYI	9	Unmodified	_LLDPRIYYI_					0	0	0		ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	ENSG00000144063|ENST00000272462|MALL	ENSG00000144063|ENST00000272462|MALL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3361694216728	2	583.334424	1164.6543	2.9298	0.001709	-0.063176	-3.6853E-05	2.8666	0.0016722	583.3346279685636	64.297	0.52216	65.705	65.401	65.923	1.4071					44	16	3	0	0	0	0.081597	1	26993	26993		55.503	1.6699	1	9029000			18590	3066	8978	9017	21535	21535					0.07855462062548213
LLDPRIYYI	9	Unmodified	_LLDPRIYYI_					0	0	0		ENSG00000144063|ENST00000272462|MALL;ENST00000568189.5_1_2:111003217-111043255:+|nuORF	ENSG00000144063|ENST00000272462|MALL	ENSG00000144063|ENST00000272462|MALL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3363525271416	2	583.334424	1164.6543	2.8412	0.0016574	0.041435	2.4171E-05	2.8826	0.0016815	583.3346050660128	63.814	0.52648	65.742	65.393	65.919	1.928					50	16	4	0	0	0	0.046715	2	26768	26768;26825		70.332	16.499	1	8818700			18591	3066	8978	9017	21536;21537	21536					0.07855462062548213
LLDPSVFHV	9	Unmodified	_LLDPSVFHV_					0	0	0		ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF;PFKFB3-NOC4L|1|fusion	ENSG00000184967|ENST00000330579|NOC4L	ENSG00000184967|ENST00000330579|NOC4L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7863036990166	2	513.784567	1025.55458	2.3931	0.0012295	0.93792	0.00048189	3.331	0.0017114	513.7849275652399	62.348	0.43591	62.348	62.086	62.522	0					31	13	3	0	0	0	0.061246	2	25953	25953;26002		63.563	38.889	1	1821400			18592	4721	8979	9018	21538;21539	21538					0.04282644448608153
LLDPSVFHV	9	Unmodified	_LLDPSVFHV_					0	0	0		ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF;PFKFB3-NOC4L|1|fusion	ENSG00000184967|ENST00000330579|NOC4L	ENSG00000184967|ENST00000330579|NOC4L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.7861816287041	2	513.784567	1025.55458	2.1244	0.0010915	0.91963	0.00047249	3.044	0.001564	513.7849189458491	61.82	0.40393	62.149	61.949	62.353	0.32974					21	12	2	0	0	0	0.046276	3	25906	25859;25906;25956		70.716	32.564	1	1794400			18593	4721	8979	9018	21540;21541;21542	21541					0.04282644448608153
LLDPSVFHV	9	Unmodified	_LLDPSVFHV_					0	0	0		ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF;PFKFB3-NOC4L|1|fusion	ENSG00000184967|ENST00000330579|NOC4L	ENSG00000184967|ENST00000330579|NOC4L	MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7860595583916	2	513.784567	1025.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.637	1	62.056	61.556	62.556	1.4196								0	0	0	0.049731	1	25433	25433		60.39	18.295	1				18594	4721	8979	9018	21543	21543					0.04282644448608153
LLDPSVFHV	9	Unmodified	_LLDPSVFHV_					0	0	0		ENSG00000184967|ENST00000330579|NOC4L;ENST00000538784.2_1_12:132635515-132636943:+|nuORF;PFKFB3-NOC4L|1|fusion	ENSG00000184967|ENST00000330579|NOC4L	ENSG00000184967|ENST00000330579|NOC4L	MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7864257693291	2	513.784567	1025.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.162	1	62.128	61.628	62.628	1.9653								0	0	0	0.049731	1	25246	25246		60.39	22.238	1				18595	4721	8979	9018	21544	21544					0.04282644448608153
LLDRFLATV	9	Unmodified	_LLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3150512576103	2	524.313492	1046.61243	2.2895	0.0012004	0.26734	0.00014017	2.5568	0.0013406	524.3138140621915	62.833	0.5918	62.833	62.584	63.176	0					45	18	4	0	0	0	0.0061207	3	26192	26143;26192;26233		117.76	39.033	1	4904100			18596	2047	8980	9019	21545;21546;21547	21546					0.09098906374038052
LLDRFLATV	9	Unmodified	_LLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3148681521416	2	524.313492	1046.61243	2.0638	0.0010821	0.52375	0.00027461	2.5876	0.0013567	524.3138334732886	62.317	0.496	62.647	62.416	62.912	0.32974					39	15	4	0	0	0	0.010388	2	26115	26063;26115		107.1	37.995	1	5855300			18597	2047	8980	9019	21548;21549	21549					0.09098906374038052
LLDRFLATV	9	Unmodified	_LLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3152953982353	2	524.313492	1046.61243	3.1883	0.0016717	-1.314	-0.00068892	1.8743	0.00098273	524.313053328648	61.119	0.7076	62.539	62.345	63.053	1.4196					62	22	4	0	0	0	0.00023236	3	25624	25576;25624;25684		140.63	51.679	1	19922000			18598	2047	8980	9019	21550;21551;21552	21551					0.09098906374038052
LLDRFLATV	9	Unmodified	_LLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3149291872978	2	524.313492	1046.61243	3.3445	0.0017536	-1.9464	-0.0010205	1.3981	0.00073305	524.3126155810194	60.565	0.71176	62.53	62.324	63.036	1.9653					53	22	4	0	0	0	0.0061207	4	25426	25380;25426;25466;25514		117.76	39.033	1	16039000			18599	2047	8980	9019	21553;21554;21555;21556	21554					0.09098906374038052
LLDSLIFSRVF	11	Unmodified	_LLDSLIFSRVF_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|277|2|anti-sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|277|2|anti-sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|277|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.5915099978447	3	437.255334	1308.74417	1.0707	0.00046816	2.7044	0.0011825	3.7751	0.0016507	437.25570705883376	96.569	0.38641	96.569	96.475	96.862	0					18	12	3	0	0	0	1.0254	1	40380	40380		2.2527	0.34635	1	2216700			18600	7755	8981	9020	21557	21557					0.10215091671125265
LLDSVLVTL	9	Unmodified	_LLDSVLVTL_					0	0	0		ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	ENSG00000185504|ENST00000327787|FAAP100	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5920898318291	1	972.597575	971.590298	2.3811	0.0023159	-3.1153	-0.0030299	-0.73418	-0.00071406	972.5943985716261	89.067	0.28768	89.067	88.859	89.146	0					13	8	2	0	0	0	0.24063	1	37241	37241		28.487	0	1	645830			18601	4749	8982	9021	21558	21558					0.10336681905619116
LLDVAISLA	9	Unmodified	_LLDVAISLA_					0	0	0			REV__SEC23B|p.G275D|1|0.04|ENSG00000101310|chr20:18525922-18525922|G/A|missense_variant	REV__SEC23B|p.G275D|1|0.04|ENSG00000101310|chr20:18525922-18525922|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	914.5577270388603	1	914.55571	913.548434	2.0747	0.0018974	0.072816	6.6594E-05	2.1475	0.001964	914.5559255072285	65.741	0.60518	67.14	66.941	67.546	1.3989					34	19	3	0	0	0	0.12174	1	27593	27593		42.095	2.1372	1	1593200	+		18602	14615	8983	9022	21559	21559					0.08820126217096913
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	940.5726196169853	1	940.57136	939.564084	1.8881	0.0017758	0.73562	0.0006919	2.6237	0.0024678	940.5712868224997	81.055	0.24765	81.055	80.916	81.164	0					11	7	2	0	0	0	0.11643	1	33763	33763		43.858	7.7313	1	752880			18603	5139;4266	8984	9023	21560	21560					0.09188412734147278
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	940.5727416872978	1	940.57136	939.564084	2.65	0.0024926	-0.19493	-0.00018335	2.4551	0.0023092	940.5713793782191	79.579	0.3728	80.83	80.645	81.017	1.2512					24	11	3	0	0	0	0.04145	2	33388	33388;33442		74.929	22.661	1	2218200			18604	5139;4266	8984	9023	21561;21562	21561					0.09188412734147278
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7902099490166	2	470.789318	939.564084	2.8919	0.0013615	-0.39979	-0.00018822	2.4921	0.0011732	470.7889735601084	79.608	0.34242	80.859	80.675	81.017	1.2512					19	10	3	0	0	0	0.083604	1	33405	33405		54.774	8.7526	1	1239200			18605	5139;4266	8984	9023	21563	21563					0.09188412734147278
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	940.5728027224541	1	940.57136	939.564084	2.1512	0.0020234	-1.0653	-0.001002	1.086	0.0010214	940.5705558499213	79.115	0.34016	80.85	80.66	81.001	1.735					19	10	2	0	0	0	0.049839	2	33172	33172;33224		68.081	19.735	1	2101900			18606	5139;4266	8984	9023	21564;21565	21564					0.09188412734147278
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7903320193291	2	470.789318	939.564084	2.3081	0.0010866	0.88237	0.00041541	3.1905	0.0015021	470.7899437269778	79.034	0.27937	80.769	80.691	80.97	1.735					16	8	2	0	0	0	0.1735	1	33209	33209		36.044	5.8194	1	2686800			18607	5139;4266	8984	9023	21566	21566					0.09188412734147278
LLDVAPLSL	9	Unmodified	_LLDVAPLSL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A;ENST00000445535.1_1_1:161576981-161578004:+|nuORF;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	940.57136	939.564084	1.9728	0.0018555	0.1556	0.00014635	2.1284	0.0020019	940.5714323402059	80.573	0.37181	80.863	80.655	81.026	0.29056	-0.036276	0.00030255	NaN	74.929	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538560			18608	5139;4266	8984	9023							0.09188412734147278
LLDVLAPLV	9	Unmodified	_LLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1999389529228	2	476.807511	951.600469	3.4661	0.0016527	0.23069	0.00011	3.6968	0.0017627	476.80739269486014	93.972	0.34986	94.117	93.878	94.228	0.14493					19	10	2	0	0	0	0.094078	1	39323	39323		12.532	3.9383	1	842330			18609	4631	8985	9024	21567	21567					0.12273289630832096
LLDVLAPLV	9	Unmodified	_LLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	952.6126586794853	1	952.607746	951.600469	3.4827	0.0033176	1.5521	0.0014786	5.0348	0.0047962	952.6087566017427	93.116	0.48895	93.988	93.769	94.258	0.87176					34	14	3	0	0	0	0.069258	2	39180	39180;39219		60.39	6.814	1	4913300			18610	4631	8985	9024	21568;21569	21568					0.12273289630832096
LLDVLAPLV	9	Unmodified	_LLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	952.607746	951.600469	1.7442	0.0016616	1.8789	0.0017898	3.6231	0.0034514	952.6099760093658	94.398	0.46016	94.398	94.119	94.579	0	0.29697	0.00030545	NaN	60.39	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2662200			18611	4631	8985	9024							0.12273289630832096
LLDVLAPLV	9	Unmodified	_LLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	952.607746	951.600469	2.7108	0.0025823	1.6454	0.0015674	4.3562	0.0041497	952.610004032513	93.932	0.50945	94.077	93.815	94.325	0.14493	-0.02383	8.3005E-05	NaN	60.39	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2782200			18612	4631	8985	9024							0.12273289630832096
LLDVLAPLV	9	Unmodified	_LLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	952.607746	951.600469	3.4882	0.0033229	1.2891	0.001228	4.7773	0.0045509	952.6089973836741	92.614	0.48181	93.941	93.765	94.247	1.3269	-0.1598	-0.00025641	NaN	60.39	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5241300			18613	4631	8985	9024							0.12273289630832096
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	898.5272094607353	1	898.52441	897.517133	1.7708	0.0015911	0.79685	0.00071599	2.5677	0.0023071	898.5250675058924	56.709	0.43711	56.709	56.458	56.895	0					44	14	4	0	0	0	0.018723	3	23628	23582;23628;23678		100.37	38.049	1	33210000			18614	5263	8986	9025	21570;21571;21572	21571					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	449.7671081423759	2	449.765843	897.517133	1.7403	0.00078273	1.3058	0.0005873	3.0461	0.00137	449.7663999692711	56.676	0.40655	56.676	56.488	56.895	0					30	13	4	0	0	0	0.03795	2	23620	23620;23675		77.984	29.638	1	14183000			18615	5263	8986	9025	21573;21574	21573					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	898.5273315310478	1	898.52441	897.517133	2.2513	0.0020229	0.40712	0.00036581	2.6584	0.0023887	898.5246775223101	56.308	0.42644	56.629	56.418	56.845	0.32103					45	14	4	0	0	0	0.018723	3	23588	23542;23588;23640		100.37	36.135	1	32170000			18616	5263	8986	9025	21575;21576;21577	21576					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	449.7669555544853	2	449.765843	897.517133	2.7317	0.0012286	0.21223	9.5453E-05	2.9439	0.0013241	449.76584939652616	56.337	0.37029	56.658	56.445	56.816	0.32103					30	12	3	0	0	0	0.028763	2	23614	23568;23614		89.427	32.886	1	17881000			18617	5263	8986	9025	21578;21579	21579					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	898.5273925662041	1	898.52441	897.517133	1.1987	0.0010771	1.1651	0.0010469	2.3638	0.002124	898.5254223443175	55.162	0.51697	56.567	56.328	56.845	1.4048					55	17	4	0	0	0	0.018723	4	23140	23052;23101;23140;23201		100.37	25.949	1	88657000			18618	5263	8986	9025	21580;21581;21582;21583	21582					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	449.7670165896416	2	449.765843	897.517133	1.6655	0.00074907	1.4999	0.00067462	3.1654	0.0014237	449.76650558362985	55.191	0.40241	56.6	56.39	56.793	1.4099					33	13	3	0	0	0	0.046276	3	23104	23056;23104;23154		70.716	22.37	1	18903000			18619	5263	8986	9025	21584;21585;21586	21585					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	898.5264770388603	1	898.52441	897.517133	1.187	0.0010666	0.42581	0.0003826	1.6128	0.0014492	898.5247959345431	54.685	0.49139	56.654	56.409	56.9	1.9684					50	16	4	0	0	0	0.018723	3	22858	22858;22905;22957		100.37	41.693	1	87133000			18620	5263	8986	9025	21587;21588;21589	21587					0.06427553182993506
LLDVPTAAV	9	Unmodified	_LLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	449.7665588259697	2	449.765843	897.517133	1.5071	0.00067784	0.87801	0.0003949	2.3851	0.0010727	449.76643011762246	54.714	0.34518	56.682	56.495	56.84	1.9684					31	11	3	0	0	0	0.03795	3	22917	22870;22917;22973		77.984	29.638	1	28160000			18621	5263	8986	9025	21590;21591;21592	21591					0.06427553182993506
LLDVQPHTV	9	Unmodified	_LLDVQPHTV_					0	0	0		ENSG00000150054|ENST00000683449|MPP7;ENST00000496637.6_1_10:28342996-28348461:-|nuORF	ENSG00000150054|ENST00000683449|MPP7	ENSG00000150054|ENST00000683449|MPP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2891723513603	2	511.287474	1020.5604	1.0383	0.00053089	0.81841	0.00041844	1.8568	0.00094933	511.28842520388224	31.137	0.25533	32.418	32.246	32.501	1.2813					15	7	3	0	0	0	0.04812	1	13046	13046		69.105	10.426	1	789410			18622	3262	8987	9026	21593	21593					0.05093742960286818
LLDVQPHTV	9	Unmodified	_LLDVQPHTV_					0	0	0		ENSG00000150054|ENST00000683449|MPP7;ENST00000496637.6_1_10:28342996-28348461:-|nuORF	ENSG00000150054|ENST00000683449|MPP7	ENSG00000150054|ENST00000683449|MPP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2882263064384	2	511.287474	1020.5604	1.1935	0.00061024	0.90097	0.00046065	2.0945	0.0010709	511.2877675390713	30.559	0.2511	32.374	32.262	32.513	1.8151					12	7	2	0	0	0	0.12251	1	12815	12815		41.84	9.5341	1	725490			18623	3262	8987	9026	21594	21594					0.05093742960286818
LLDVQPHTV	9	Unmodified	_LLDVQPHTV_					0	0	0		ENSG00000150054|ENST00000683449|MPP7;ENST00000496637.6_1_10:28342996-28348461:-|nuORF	ENSG00000150054|ENST00000683449|MPP7	ENSG00000150054|ENST00000683449|MPP7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.287474	1020.5604	1.3967	0.00071411	-0.063215	-3.2321E-05	1.3335	0.00068179	511.2875330029972	32.209	0.15723	32.504	32.403	32.56	0.29431	0.071748	-0.00077353	NaN	69.105	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185910			18624	3262	8987	9026							0.05093742960286818
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.7952453494072	2	485.794601	969.574648	1.9554	0.00094992	-0.51368	-0.00024954	1.4417	0.00070038	485.79416367736104	80.838	0.37361	80.838	80.666	81.04	0					26	11	3	0	0	0	0.013238	2	33680	33632;33680		104.8	19.442	1	2896300			18625	1687;1804	8988	9027	21595;21596	21596					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	970.5840331912041	1	970.581925	969.574648	1.8975	0.0018416	-0.39849	-0.00038676	1.499	0.0014549	970.5814951719032	80.838	0.37361	80.838	80.666	81.04	0					27	11	3	0	0	0	0.00090036	2	33692	33642;33692		133.7	21.109	1	5722200			18626	1687;1804	8988	9027	21597;21598	21598					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	970.5829345583916	1	970.581925	969.574648	1.9195	0.001863	-0.32961	-0.00031991	1.5898	0.0015431	970.581815929958	80.351	0.40293	80.642	80.468	80.871	0.29056					29	12	3	0	0	0	0.00090036	3	33608	33561;33608;33664		133.7	22.788	1	4481200			18627	1687;1804	8988	9027	21599;21600;21601	21600					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.7954284548759	2	485.794601	969.574648	2.6548	0.0012897	-1.1285	-0.00054822	1.5263	0.00074148	485.7939535037744	80.409	0.37142	80.699	80.468	80.84	0.29056					25	11	3	0	0	0	0.013238	1	33618	33618		104.8	19.442	1	4551000			18628	1687;1804	8988	9027	21602	21602					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	970.5837890505791	1	970.581925	969.574648	2.4074	0.0023366	-0.71683	-0.00069574	1.6905	0.0016408	970.5810892267696	79.408	0.37497	80.659	80.456	80.831	1.2512					30	11	3	0	0	0	0.00090036	3	33371	33276;33322;33371		133.7	21.109	1	11134000			18629	1687;1804	8988	9027	21603;21604;21605	21605					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7906677126884	2	485.794601	969.574648	2.8354	0.0013774	-2.9212	-0.0014191	-0.085791	-4.1677E-05	485.7928980761383	79.347	0.37497	80.614	80.471	80.846	1.2668					33	11	4	0	0	0	0.042029	2	33291	33291;33364		74.423	10.186	1	5380600			18630	1687;1804	8988	9027	21606;21607	21606					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7942077517509	2	485.794601	969.574648	2.0385	0.00099032	-2.5549	-0.0012412	-0.51634	-0.00025084	485.792987862944	78.949	0.30737	80.684	80.506	80.814	1.735					31	9	4	0	0	0	0.0075027	2	33115	33065;33115		112.59	22.937	1	4470000			18631	1687;1804	8988	9027	21608;21609	21609					0.08864395388582125
LLDVTPLSL	9	Unmodified	_LLDVTPLSL_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000508003.1_1_5:137895468-137897466:-|nuORF;ENST00000425843.1_1_X:120337248-120337797:-|nuORF;tr|A0A553SKN5|A0A553SKN5_NIACIChaperoneproteinDnaKOS=NialliacirculansOX=1397GN=dnaKPE=2SV=1;ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8;ENSG00000113013|ENST00000297185|HSPA9	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	970.5827514529228	1	970.581925	969.574648	1.8958	0.00184	-0.5705	-0.00055372	1.3253	0.0012863	970.5816027245393	78.91	0.37096	80.645	80.475	80.846	1.735					30	11	4	0	0	0	0.0054014	2	33112	33072;33112		120.45	20.079	1	9115100			18632	1687;1804	8988	9027	21610;21611	21611					0.08864395388582125
LLDWLVSV	8	Unmodified	_LLDWLVSV_					0	0	0			REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7778198122978	2	472.776211	943.537869	2.0546	0.00097135	0.23981	0.00011338	2.2944	0.0010847	472.7759437032919	65.775	1.4219	67.684	66.907	68.329	1.9085					108	45	3	0	0	0	0.41488	1	27678	27678		53.576	1.3072	1	5188500	+		18633	8732	8989	9028	21612	21612					0.06384143562661393
LLDYHLNYL	9	Unmodified	_LLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.3112670779228	2	582.308406	1162.60226	1.9429	0.0011314	2.4609	0.001433	4.4038	0.0025644	582.310430176042	61.326	0.18666	61.656	61.548	61.735	0.32974					7	5	2	0	0	0	0.68551	1	25705	25705		7.9102	1.187	1	281260			18634	1380	8990	9029	21613	21613					0.02746298648821721
LLDYHLNYL	9	Unmodified	_LLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3088256716728	2	582.308406	1162.60226	2.6251	0.0015286	-0.80967	-0.00047148	1.8154	0.0010572	582.3071493575568	60.22	0.33007	61.64	61.449	61.779	1.4196					21	10	3	0	0	0	0.063746	1	25242	25242		62.573	29.787	1	1660300			18635	1380	8990	9029	21614	21614					0.02746298648821721
LLDYHLNYL	9	Unmodified	_LLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3115112185478	2	582.308406	1162.60226	2.8399	0.0016537	-0.72396	-0.00042157	2.1159	0.0012321	582.3075619829093	59.719	0.24401	61.688	61.55	61.794	1.969					13	7	2	0	0	0	0.11643	1	25083	25083		43.858	21.122	1	1385500			18636	1380	8990	9029	21615	21615					0.02746298648821721
LLDYLFEP	8	Unmodified	_LLDYLFEP_					0	0	0			REV__nc|ENSG00000138964|Q9HBI0-5|PARVG	REV__nc|ENSG00000138964|Q9HBI0-5|PARVG	MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2672607302666	2	505.265676	1008.5168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.197	1	99.197	98.697	99.697	0								0	0	0	1.0178	1	41514	41514		4.756	2.1785	1		+		18637	10089	8991	9030	21616	21616					0.012881334631515529
LLDYYSNGLE	10	Unmodified	_LLDYYSNGLE_					0	0	0			REV__tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	REV__tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.7867309451103	2	593.784961	1185.55537	2.1266	0.0012627	0.85248	0.00050619	2.9791	0.0017689	593.7854608227688	74.954	1.8684	74.954	74.173	76.041	0					128	58	3	0	0	0	0.88022	1	31120	31120		3.5965	1.2938	1	1620400	+		18638	15487	8992	9031	21617	21617					-0.029986056930056293
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8207275271416	2	576.816596	1151.61864	3.1637	0.0018249	1.9148	0.0011045	5.0786	0.0029294	576.8176822666327	72.728	0.34344	74.058	73.852	74.195	1.3298					22	10	3	0	0	0	0.75645	1	30520	30520		15.847	1.0089	1	1376600	+		18639	14931	8993	9032	21618	21618					0.04889379814903805
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8191406130791	2	576.816596	1151.61864	2.7045	0.00156	3.6071	0.0020806	6.3115	0.0036406	576.8177334456925	72.301	0.36944	74.111	73.952	74.321	1.8101					28	11	4	0	0	0	0.65574	1	30350	30350		20.454	6.9457	1	1504400	+		18640	14931	8993	9032	21619	21619					0.04889379814903805
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	576.816596	1151.61864	1.6916	0.00097576	0.32291	0.00018626	2.0145	0.001162	576.8159835814477	73.88	0.40683	73.88	73.734	74.141	0	-0.10452	-0.0021798	NaN	20.454	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	514200	+		18641	14931	8993	9032							0.04889379814903805
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	576.816596	1151.61864	2.2107	0.0012751	0.91015	0.00052499	3.1208	0.0018001	577.3198556993302	73.564	0.31887	73.889	73.754	74.073	0.32494	-0.095419	-0.0015024	NaN	20.454	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441820	+		18642	14931	8993	9032							0.04889379814903805
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	576.816596	1151.61864	3.1637	0.0018249	1.9148	0.0011045	5.0786	0.0029294	576.8176822666327	72.728	0.34344	74.058	73.852	74.195	1.3298	0.073377	-0.00034333	NaN	20.454	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1376600	+		18643	14931	8993	9032							0.04889379814903805
LLEAAEKHEI	10	Unmodified	_LLEAAEKHEI_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	576.816596	1151.61864	2.7045	0.00156	3.6071	0.0020806	6.3115	0.0036406	576.8177334456925	72.301	0.36944	74.111	73.952	74.321	1.8101	0.12657	0.0016089	NaN	20.454	28	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1504400	+		18644	14931	8993	9032							0.04889379814903805
LLEAAKEWPDV	11	Unmodified	_LLEAAKEWPDV_					0	0	0		ENST00000460072.5_1_2:39963877-39988481:-|nuORF;ENSG00000138050|ENST00000505747|THUMPD2	ENST00000460072.5_1_2:39963877-39988481:-|nuORF	ENST00000460072.5_1_2:39963877-39988481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	635.8383056521416	2	635.837528	1269.6605	2.5858	0.0016442	-0.35647	-0.00022666	2.2294	0.0014175	635.8373016490942	93.661	0.35066	93.806	93.623	93.973	0.14494					33	10	4	0	0	0	0.89563	1	39170	39170		10.074	0	1	2136500			18645	2807	8994	9033	21620	21620					0.03645935503391229
LLEAEKLFF	9	Unmodified	_LLEAEKLFF_					0	0	0			REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1109.631152331829	1	1109.62412	1108.61685	3.713	0.0041201	2.3047	0.0025573	6.0177	0.0066774	1109.6266099381892	103.75	0.20139	103.81	103.74	103.94	0.059502					17	10	2	0	0	0	0.68551	1	43612	43612		7.9102	1.187	1	20854000	+		18646	15811	8995	9034	21621	21621					0.06688370796950949
LLEAEKLFF	9	Unmodified	_LLEAEKLFF_					0	0	0			REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1109.630786120892	1	1109.62412	1108.61685	2.7855	0.0030909	3.0246	0.0033562	5.8101	0.0064471	1109.627485084308	103.75	0.17026	103.91	103.82	103.99	0.16055					20	8	4	0	0	0	0.68551	1	43803	43803		7.9102	0.62092	1	35431000	+		18647	15811	8995	9034	21622	21622					0.06688370796950949
LLEAEKLFF	9	Unmodified	_LLEAEKLFF_					0	0	0			REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1109.629565417767	1	1109.62412	1108.61685	3.2826	0.0036425	1.8429	0.0020449	5.1255	0.0056873	1109.6255741732527	103.72	0.1736	103.9	103.79	103.97	0.1731					13	8	2	0	0	0	0.68551	1	43741	43741		7.9102	0.62092	1	17124000	+		18648	15811	8995	9034	21623	21623					0.06688370796950949
LLEAEKLFF	9	Unmodified	_LLEAEKLFF_					0	0	0			REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	REV__tr|A0A7D7A0K1|A0A7D7A0K1_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_00405PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1109.62412	1108.61685	3.2826	0.0036425	1.8429	0.0020449	5.1255	0.0056873	1109.6255741732527	103.72	0.1736	103.9	103.79	103.97	0.1731	0.051268	-0.0012444	NaN	7.9102	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17124000	+		18649	15811	8995	9034							0.06688370796950949
LLEAPLLLGV	10	Unmodified	_LLEAPLLLGV_					0	0	0		ENSG00000157240|ENST00000287934|FZD1	ENSG00000157240|ENST00000287934|FZD1	ENSG00000157240|ENST00000287934|FZD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5601684451103	3	346.558354	1036.65323	1.4964	0.00051859	2.5797	0.00089401	4.0761	0.0014126	346.5594148925889	63.812	1.0536	64.141	63.348	64.401	0.32899					46	17	3	0	0	0	0.89588	1	26754	26754		1.9064	0	1	2615900			18650	3467	8996	9035	21624	21624					0.13637247693668542
LLEAPLLVVL	10	Unmodified	_LLEAPLLVVL_					0	0	0			REV__ENST00000496771.5_1_X:99890559-99890655:-|nuORF	REV__ENST00000496771.5_1_X:99890559-99890655:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5747863650322	3	360.574004	1078.70018	0.12215	4.4045E-05	1.809	0.00065229	1.9312	0.00069633	360.57452961139836	22.23	0.60458	23.846	23.674	24.278	1.6158					57	19	4	0	0	0	0.89803	1	9294	9294		0.77653	0.77653	1	11472000	+		18651	13472	8997	9036	21625	21625					0.16398107244822313
LLEASVPIV	9	Unmodified	_LLEASVPIV_					0	0	0		sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2;sp|F5HIG1|HEPA_HCMVMDNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL102PE=3SV=1	sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	sp|P16827|HEPA_HCMVADNAhelicase/primasecomplex-associatedproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL102PE=2SV=2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7125121951103	3	314.195304	939.564084	0.2032	6.3845E-05	3.6472	0.0011459	3.8504	0.0012098	314.1964738745834	25.766	0.39754	26.018	25.797	26.194	0.25197					18	12	2	0	0	0	0.11901	1	10755	10755		2.7352	0.23671	1	873860			18652	15987	8998	9037	21626	21626					0.09188412734135909
LLEDKNFHEA	10	Unmodified	_LLEDKNFHEA_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.8726379275322	3	405.87166	1214.59315	0.58997	0.00023945	2.0693	0.00083987	2.6593	0.0010793	405.872491666771	17.425	0.25787	17.576	17.459	17.717	0.15094					21	9	3	0	0	0	0.80011	1	7262	7262		7.4771	1.2852	1	2833300			18653	4574	8999	9038	21627	21627					-0.005560947075309741
LLEDKNFHEA	10	Unmodified	_LLEDKNFHEA_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.8733398318291	3	405.87166	1214.59315	0.028999	1.177E-05	3.3392	0.0013553	3.3682	0.0013671	405.8729503510108	16.709	0.20052	17.607	17.486	17.686	0.89794					16	7	3	0	0	0	0.81347	1	6932	6932		9.7643	4.7167	1	2073700			18654	4574	8999	9038	21628	21628					-0.005560947075309741
LLEEFEWLH	9	Unmodified	_LLEEFEWLH_					0	0	0		XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant	XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant	XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.8732482790947	3	405.873001	1214.59717	-0.63778	-0.00025886	0.23849	9.6796E-05	-0.39929	-0.00016206	405.87327645622287	17.826	0.37082	17.826	17.625	17.996	0					40	11	5	0	0	0	0.55689	1	7356	7356		13.042	0.16986	1	15523000			18655	17357	9000	9039	21629	21629					-0.0015400521381252474
LLEETCWCC	9	Unmodified	_LLEETCWCC_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|252|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2194091677666	2	550.216488	1098.41842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.475	1	78.756	78.256	79.256	1.2809								0	0	0	0.42693	1	32517	32517		2.3027	0	1		+		18656	14344	9001	9040	21630	21630					-0.12684877440233322
LLEGDRKAF	9	Unmodified	_LLEGDRKAF_					0	0	0		ENST00000593281.1_1_19:11541422-11545627:-|nuORF;ENSG00000198003|ENST00000356392|ODAD3	ENST00000593281.1_1_19:11541422-11545627:-|nuORF	ENST00000593281.1_1_19:11541422-11545627:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.8306762576103	2	524.792924	1047.57129	3.0775	0.001615	0.37251	0.00019549	3.45	0.0018105	524.7933171054708	82.488	0.28157	84.158	83.923	84.205	1.67					12	8	2	0	0	0	0.116	1	34598	34598		2.3027	0	1	929490			18657	5036	9002	9041	21631	21631					0.049411453345555856
LLEGEEER	8	Unmodified	_LLEGEEER_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-4|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF;ENST00000504788.5_1_5:126112928-126171953:+|nuORF;LMNB2|p.S553Mfs*13|1|0.4|ENSG00000176619|chr19:2431834-2431835|GC/-|frameshift_variant;ENSG00000113368|ENST00000261366|LMNB1;LMNB1|p.E568Tfs*24|1|0.43|ENSG00000113368|chr5:126832782-126832783|-/GACTCTGTCTCCAAAAAAAGGGATGAATAAT|frameshift_variant;ENSG00000176619|ENST00000325327|LMNB2	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7437316775322	2	487.743096	973.47164	0.053155	2.5926E-05	0.87506	0.00042681	0.92822	0.00045273	487.74311948201864	13.772	0.18579	14.499	14.38	14.565	0.72639					8	5	2	0	0	0	0.72752	1	5723	5723		27.629	6.7576	1	646680			18658	3576	9003	9042	21632	21632					-0.01615717070046685
LLEGEEER	8	Unmodified	_LLEGEEER_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-4|LMNA;ENST00000368298.2_1_1:156104977-156106341:+|nuORF;ENST00000496738.5_1_1:156104620-156106879:+|nuORF;ENST00000504788.5_1_5:126112928-126171953:+|nuORF;LMNB2|p.S553Mfs*13|1|0.4|ENSG00000176619|chr19:2431834-2431835|GC/-|frameshift_variant;ENSG00000113368|ENST00000261366|LMNB1;LMNB1|p.E568Tfs*24|1|0.43|ENSG00000113368|chr5:126832782-126832783|-/GACTCTGTCTCCAAAAAAAGGGATGAATAAT|frameshift_variant;ENSG00000176619|ENST00000325327|LMNB2	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7422668337822	2	487.743096	973.47164	0.16327	7.9632E-05	-1.7628	-0.00085979	-1.5995	-0.00078016	487.74213366920026	13.642	0.12474	14.47	14.391	14.516	0.82789					6	3	2	0	0	0	0.6902	1	5652	5652		31.268	10.397	1	687360			18659	3576	9003	9042	21633	21633					-0.01615717070046685
LLEGEESR	8	Unmodified	_LLEGEESR_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;chr12:52245632-52269659|269|46.11|0.79|5.87|+|1|TE_info:MER2,MER2_dup6706,TcMar-Tigger,DNA,acceptor,+,52269659,52269699|KRT7,None|1;ENST00000548657.5_1_12:52639243-52641994:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF;PPFIBP1-VIM|2|fusion;PPFIBP1-VIM|1|fusion;ENSG00000175084|ENST00000373960|DES;ENSG00000135406|ENST00000257860|PRPH;nc|ENSG00000135406|P41219-2|PRPH;ENSG00000189182|ENST00000341809|KRT77;CON__Q7Z794;CON__ENSEMBL:ENSBTAP00000038253;CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENSG00000161849|ENST00000257951|KRT84;CON__Q6ISB0;CON__Q9NSB2;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;ENSG00000026025|ENST00000544301|VIM	ENSG00000167768|ENST00000252244|KRT1;CON__P08729;nc|ENSG00000170421|P05787-2|KRT8;ENSG00000026025|ENST00000544301|VIM	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.7385131716728	2	466.737814	931.461075	0.078494	3.6636E-05	0.71663	0.00033448	0.79512	0.00037111	466.73814079739117	13.011	0.31404	13.738	13.537	13.851	0.72639					20	9	3	0	0	0	0.62137	2	5385	5385;5438		38.176	12.776	1	3434200		+	18660	343;345;3993;626	9004	9043	21634;21635	21634					-0.0073969972447684995
LLEGEESR	8	Unmodified	_LLEGEESR_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;chr12:52245632-52269659|269|46.11|0.79|5.87|+|1|TE_info:MER2,MER2_dup6706,TcMar-Tigger,DNA,acceptor,+,52269659,52269699|KRT7,None|1;ENST00000548657.5_1_12:52639243-52641994:+|nuORF;ENST00000552322.5_1_12:52638288-52642544:+|nuORF;PPFIBP1-VIM|2|fusion;PPFIBP1-VIM|1|fusion;ENSG00000175084|ENST00000373960|DES;ENSG00000135406|ENST00000257860|PRPH;nc|ENSG00000135406|P41219-2|PRPH;ENSG00000189182|ENST00000341809|KRT77;CON__Q7Z794;CON__ENSEMBL:ENSBTAP00000038253;CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENSG00000161849|ENST00000257951|KRT84;CON__Q6ISB0;CON__Q9NSB2;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000562317.1_1_16:78082520-78083381:-|nuORF;ENSG00000026025|ENST00000544301|VIM	ENSG00000167768|ENST00000252244|KRT1;CON__P08729;nc|ENSG00000170421|P05787-2|KRT8;ENSG00000026025|ENST00000544301|VIM	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.7381774783134	2	466.737814	931.461075	0.43917	0.00020498	0.3896	0.00018184	0.82877	0.00038682	466.73787024068645	12.801	0.21232	13.589	13.489	13.701	0.78751					18	6	4	0	0	0	0.5287	2	5297	5297;5343		45.7	13.394	1	3840700		+	18661	343;345;3993;626	9004	9043	21636;21637	21636					-0.0073969972447684995
LLEGTLLKL	9	Unmodified	_LLEGTLLKL_					0	0	0			REV__ENSG00000033050|ENST00000287844|ABCF2	REV__ENSG00000033050|ENST00000287844|ABCF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3264037966728	2	500.326068	998.637583	3.0208	0.0015114	-1.5074	-0.00075418	1.5134	0.00075719	500.32494693514286	59.173	0.059135	59.499	59.465	59.524	0.32553					6	4	2	0	0	0	0.32838	1	24803	24803		24.021	2.2739	1	1841900	+		18662	8579	9005	9044	21638	21638					0.1382096117661149
LLEHYEWN	8	Unmodified	_LLEHYEWN_					0	0	0		GRIA4|p.D147E|1|0.06|ENSG00000152578|chr11:105753174-105753174|T/A|missense_variant	GRIA4|p.D147E|1|0.06|ENSG00000152578|chr11:105753174-105753174|T/A|missense_variant	GRIA4|p.D147E|1|0.06|ENSG00000152578|chr11:105753174-105753174|T/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	552.2611572146416	2	552.261456	1102.50836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.721	1	67.045	66.545	67.545	0.32449								0	0	0	1.0178	1	27929	27929		10.824	0	1				18663	7592	9006	9045	21639	21639					-0.03879420453495186
LLEKKQHK	8	Unmodified	_LLEKKQHK_					0	0	0			REV__ZSWIM5|p.L701Hfs*6|1|0.15|ENSG00000162415|chr1:45036092-45036093|-/AAGGTAT|frameshift_variant	REV__ZSWIM5|p.L701Hfs*6|1|0.15|ENSG00000162415|chr1:45036092-45036093|-/AAGGTAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.8821594119072	3	341.881831	1022.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.20419	1	0.87157	0.37157	1.3716	0.66738								0	0	0	1.0178	1	83	83		0.40072	0	1		+		18664	10645	9007	9046	21640	21640					0.11325728468182206
LLEKLVKWKFI	11	Unmodified	_LLEKLVKWKFI_					0	0	0			REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9722473025322	3	472.970758	1415.89044	2.2008	0.0010409	0.98232	0.00046461	3.1831	0.0015055	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0388	2	16817	16651;16817		0.50596	0.051438	1	10069000	+		18665	14913	9008	9047	21641;21642	21642					0.19913393907017962
LLEKLVKWKFI	11	Unmodified	_LLEKLVKWKFI_					0	0	0			REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.9710876345634	3	472.970758	1415.89044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.016	1	36.318	35.818	36.818	0.30197								0	0	0	0.63775	1	15143	15143		0.094841	0	1		+		18666	14913	9008	9047	21643	21643					0.19913393907017962
LLEKLVKWKFI	11	Unmodified	_LLEKLVKWKFI_					0	0	0			REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0703002810478	4	354.979887	1415.89044	0.93668	0.0003325	-0.073569	-2.6115E-05	0.86312	0.00030639	354.98054064276755	32.342	0.15649	32.636	32.528	32.685	0.29431					6	4	2	0	0	0	0.14606	1	13539	13539		0	0	1	117930	+		18667	14913	9008	9047	21644	21644					0.19913393907017962
LLEKLVKWKFI	11	Unmodified	_LLEKLVKWKFI_					0	0	0			REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	REV__tr|A0A553SJN7|A0A553SJN7_NIACIGlucose-1-phosphateadenylyltransferaseOS=NialliacirculansOX=1397GN=glgCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0695373415947	4	354.979887	1415.89044	1.158	0.00041108	-0.42176	-0.00014972	0.73627	0.00026136	354.97966854480654	36.388	0.31832	36.69	36.581	36.899	0.30196					28	21	3	0	0	0	0.14606	1	15298	15298		0	0	1	4925300	+		18668	14913	9008	9047	21645	21645					0.19913393907017962
LLELLPRAI	9	Unmodified	_LLELLPRAI_					0	0	0			REV__ENST00000344756.8_1_7:155089988-155093980:+|nuORF	REV__ENST00000344756.8_1_7:155089988-155093980:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1397582888603	2	519.33951	1036.66447	2.5297	0.0013138	-0.30705	-0.00015947	2.2227	0.0011543	519.3394144971709	62.842	0.24752	64.786	64.628	64.875	1.9444					12	7	2	0	0	0	0.116	1	26306	26306		9.3474	0	1	595060	+		18669	12520	9009	9048	21646	21646					0.14760069787803332
LLELLWNKYWV	11	Unmodified	_LLELLWNKYWV_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5;ENST00000517834.5_1_8:67930048-67963539:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	738.9192382693291	2	738.916113	1475.81767	3.5158	0.0025979	3.7156	0.0027455	7.2314	0.0053434	738.9183039864815	93.525	0.57309	94.397	94.194	94.767	0.87176					32	17	3	0	0	0	0.96769	1	39354	39354		5.7319	2.1354	1	1502700			18670	2125	9010	9049	21647	21647					0.09879640113604182
LLELLWNKYWV	11	Unmodified	_LLELLWNKYWV_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5;ENST00000517834.5_1_8:67930048-67963539:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	738.9208862185478	2	738.916113	1475.81767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.055	1	94.797	94.297	95.297	0.74124								0	0	0	0.63775	1	39576	39576		3.5965	0.31518	1				18671	2125	9010	9049	21648	21648					0.09879640113604182
LLELLWNKYWV	11	Unmodified	_LLELLWNKYWV_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5;ENST00000517834.5_1_8:67930048-67963539:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	738.9203979372978	2	738.916113	1475.81767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.189	1	94.931	94.431	95.431	0.74124								0	0	0	0.63775	1	39632	39632		5.7319	2.4505	1				18672	2125	9010	9049	21649	21649					0.09879640113604182
LLELLWNKYWV	11	Unmodified	_LLELLWNKYWV_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5;ENST00000517834.5_1_8:67930048-67963539:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	739.4172241091728	2	738.916113	1475.81767	2.6995	0.0019947	2.7409	0.0020253	5.4404	0.00402	738.9170309664189	92.999	0.44595	94.276	94.102	94.548	1.277					19	13	2	0	0	0	0.96769	1	39169	39169		5.7319	2.7366	1	1517300			18673	2125	9010	9049	21650	21650					0.09879640113604182
LLELLWNKYWV	11	Unmodified	_LLELLWNKYWV_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5;ENST00000517834.5_1_8:67930048-67963539:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	738.9216796755791	2	738.916113	1475.81767	2.6991	0.0019944	3.5952	0.0026566	6.2943	0.004651	738.919037979802	93.623	0.55656	94.9	94.58	95.136	1.277					31	17	3	0	0	0	0.96769	2	39394	39394;39444		5.7319	2.1354	1	1875600			18674	2125	9010	9049	21651;21652	21651					0.09879640113604182
LLEPAVVVA	9	Unmodified	_LLEPAVVVA_					0	0	0		ENSG00000116032|ENST00000234389|GRIN3B	ENSG00000116032|ENST00000234389|GRIN3B	ENSG00000116032|ENST00000234389|GRIN3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.1927368044853	3	304.191783	909.553519	0.082633	2.5136E-05	2.3572	0.00071704	2.4398	0.00074217	304.192604362575	28.751	1.1192	30.55	30.236	31.356	1.7987					76	36	4	0	0	0	0.77526	1	12062	12062		2.4985	0	1	22838000			18675	1947	9011	9050	21653	21653					0.09512430079701062
LLEPLLLPVGV	11	Unmodified	_LLEPLLLPVGV_					0	0	0			REV__ENST00000438808.1_1_1:11938291-11938936:+|nuORF	REV__ENST00000438808.1_1_1:11938291-11938936:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2539245486259	3	388.253042	1161.7373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.869	1	34.147	33.647	34.647	1.2782								0	0	0	0.63775	1	13784	13784		0.094841	0.094841	1		+		18676	13071	9012	9051	21654	21654					0.16289778790564924
LLEPLVQLK	9	Unmodified	_LLEPLVQLK_					0	0	0			REV__ENST00000521130.1_1_5:168547122-168727722:-|nuORF	REV__ENST00000521130.1_1_5:168547122-168727722:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.8406860232353	2	526.839342	1051.66413	2.0334	0.0010713	0.51438	0.000271	2.5478	0.0013423	526.8397364409564	54.869	0.50697	54.869	54.502	55.009	0					36	15	3	0	0	0	0.44512	1	22909	22909		18.146	3.3081	1	3453200	+		18677	11422	9013	9052	21655	21655					0.14036650067919254
LLERFLLL	8	Unmodified	_LLERFLLL_					0	0	0		ENST00000300289.9_1_15:44059005-44060742:+|nuORF	ENST00000300289.9_1_15:44059005-44060742:+|nuORF	ENST00000300289.9_1_15:44059005-44060742:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	340.2603027224541	3	339.554944	1015.643	1.891	0.00064209	-1.0413	-0.00035358	0.84966	0.0002885	339.88924174944225	60.583	0.18757	62.002	61.871	62.059	1.4196					7	5	2	0	0	0	2.3239	1	25402	25402		4.3292	1.334	1	484470			18678	5753	9014	9053	21656	21656					0.1358068475908567
LLERLPQRIN	10	Unmodified	_LLERLPQRIN_					0	0	0		ENST00000589085.5_1_19:5785216-5787684:-|nuORF;nc|ENSG00000141994|Q96G46-3|DUS3L;ENSG00000141994|ENST00000309061|DUS3L	ENST00000589085.5_1_19:5785216-5787684:-|nuORF	ENST00000589085.5_1_19:5785216-5787684:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	626.3784057497978	2	626.380229	1250.7459	2.5883	0.0016212	-0.34037	-0.0002132	2.2479	0.001408	626.3798274467554	94.227	0.46984	94.372	94.165	94.635	0.14493					48	14	4	0	0	0	0.88508	1	39396	39396		5.7319	0.83484	1	10307000			18679	2980	9015	9054	21657	21657					0.13056145479754377
LLERLPQRIN	10	Unmodified	_LLERLPQRIN_					0	0	0		ENST00000589085.5_1_19:5785216-5787684:-|nuORF;nc|ENSG00000141994|Q96G46-3|DUS3L;ENSG00000141994|ENST00000309061|DUS3L	ENST00000589085.5_1_19:5785216-5787684:-|nuORF	ENST00000589085.5_1_19:5785216-5787684:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	626.380229	1250.7459	3.9086	0.0024482	-1.1938	-0.00074774	2.7148	0.0017005	626.3793604711419	93.624	0.47889	94.496	94.226	94.705	0.87176	0.039771	-0.00083212	NaN	5.7319	41	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4449300			18680	2980	9015	9054							0.13056145479754377
LLERLRQRQ	9	Unmodified	_LLERLRQRQ_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3710815310478	2	606.370195	1210.72584	2.1574	0.0013082	-0.97056	-0.00058852	1.1869	0.00071968	606.369549653458	77.018	0.66023	77.018	76.403	77.063	0					52	20	3	0	0	0	0.85019	1	31951	31951		0.52476	0	1	5160500	+		18681	10868	9016	9055	21658	21658					0.12890394539795125
LLESQEEEKT	10	Unmodified	_LLESQEEEKT_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	603.2968627810478	2	603.298433	1204.58231	1.0797	0.00065135	-4.2457	-0.0025614	-3.166	-0.0019101	603.296313645942	17.968	0.21794	17.968	17.87	18.088	0					11	6	2	0	0	0	0.72878	1	7486	7486		17.113	2.2746	1	437600			18682	5268	9017	9056	21659	21659					-0.011795418724886986
LLESQEEEKT	10	Unmodified	_LLESQEEEKT_					0	0	0		ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	ENSG00000219626|ENST00000615575|FAM228B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	603.298433	1204.58231	0.35152	0.00021207	-2.1592	-0.0013026	-1.8077	-0.0010906	603.2969902498234	17.689	0.18427	17.862	17.708	17.892	0.17285	-0.053132	0.00081455	NaN	17.113	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207470			18683	5268	9017	9056							-0.011795418724886986
LLETEQLQLLI	11	Unmodified	_LLETEQLQLLI_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8909789919853	2	656.889761	1311.76497	2.7165	0.0017844	-0.69199	-0.00045456	2.0245	0.0013299	656.8893176713786	74.988	0.4657	76.77	76.543	77.009	1.7817					48	14	5	0	0	0	0.14477	1	31504	31504		47.749	1.7277	1	16604000	+		18684	10035	9018	9057	21660	21660					0.12155637260161711
LLEVEPLHFTC	11	Unmodified	_LLEVEPLHFTC_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.8370849490166	2	650.833931	1299.65331	3.8764	0.0025229	-0.23717	-0.00015436	3.6392	0.0023685	650.8347715706324	92.477	0.62116	93.413	93.114	93.735	0.93624					43	18	4	0	0	0	0.42228	1	38950	38950		26.268	3.6101	1	1836300			18685	1934	9019	9058	21661	21661					0.015468796313371058
LLEVEPLHFTC	11	Unmodified	_LLEVEPLHFTC_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.8337890505791	2	650.833931	1299.65331	3.3251	0.0021641	0.021997	1.4317E-05	3.3471	0.0021784	650.8341879497586	92.009	0.51438	93.336	93.054	93.568	1.3269					32	15	3	0	0	0	0.54522	2	38703	38703;38752		22.736	4.3632	1	1270600			18686	1934	9019	9058	21662;21663	21662					0.015468796313371058
LLEVTLEEDS	10	Unmodified	_LLEVTLEEDS_					0	0	0			REV__tr|A0A553SK95|A0A553SK95_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_18460PE=4SV=1	REV__tr|A0A553SK95|A0A553SK95_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_18460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.2906982302666	2	574.290076	1146.5656	3.279	0.0018831	-3.4871	-0.0020026	-0.20805	-0.00011948	574.2882069152043	101.03	0.14368	101.24	101.12	101.26	0.20526					11	4	3	0	0	0	0.89803	1	42463	42463		1.4819	0	1	7549900	+		18687	14938	9020	9059	21664	21664					-0.0018204275843345386
LLEWFVMV	8	Unmodified	_LLEWFVMV_					0	0	0			REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1395751833916	2	518.780439	1035.54633	3.2262	0.0016737	-2.3758	-0.0012325	0.8504	0.00044117	518.7798944602747	61.329	0.21013	62.746	62.624	62.834	1.4177					10	6	2	0	0	0	2.3239	1	25686	25686		2.8892	0	1	713170	+		18688	10152	9021	9060	21665	21665					0.02997374207620851
LLFAGTFILL	10	Unmodified	_LLFAGTFILL_					0	0	0			REV__ENST00000474947.1_1_7:100238307-100240397:-|nuORF	REV__ENST00000474947.1_1_7:100238307-100240397:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3455688357353	2	554.344261	1106.67397	1.4117	0.00078255	0.66103	0.00036644	2.0727	0.001149	554.3443310561966	67.477	0.36907	69.347	69.12	69.489	1.87					26	11	3	0	0	0	0.51515	1	28293	28293		26.884	1.4843	1	2082500	+		18689	9206	9022	9061	21666	21666					0.12489838073338433
LLFDDEYI	8	Unmodified	_LLFDDEYI_					0	0	0			REV__tr|A0A553SPT1|A0A553SPT1_NIACIPseudouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_08980PE=3SV=1	REV__tr|A0A553SPT1|A0A553SPT1_NIACIPseudouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_08980PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1715576052666	3	343.170936	1026.49098	0.70552	0.00024211	2.9898	0.001026	3.6953	0.0012681	343.1720695727345	69.15	0.64583	70.516	70.028	70.674	1.3657					25	20	2	0	0	0	0.87431	1	29001	29001		12.532	0	1	1543100	+		18690	15103	9023	9062	21667	21667					-0.02120760779143893
LLFDQAYQM	9	Unmodified	_LLFDQAYQM_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2;nc|ENSG00000156802|Q6PL18-2|ATAD2;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000550993.1_1_8:124368627-124369816:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7740356326103	2	564.773342	1127.53213	1.7611	0.00099464	0.23764	0.00013421	1.9988	0.0011288	564.7737291426963	65.887	0.30498	67.796	67.616	67.921	1.9085					14	9	2	0	0	0	0.39927	1	27647	27647		20.454	8.8133	1	814040			18691	3457	9024	9063	21668	21668					-0.02653323011327302
LLFDQAYQM	9	Unmodified	_LLFDQAYQM_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2;nc|ENSG00000156802|Q6PL18-2|ATAD2;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF;ENST00000550993.1_1_8:124368627-124369816:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	564.773342	1127.53213	2.035	0.0011493	0.17996	0.00010164	2.2149	0.0012509	564.7732690819945	66.303	0.27551	67.692	67.536	67.812	1.3888	-0.051693	-4.7527E-05	NaN	20.454	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644310			18692	3457	9024	9063							-0.02653323011327302
LLFDSVIHL	9	Unmodified	_LLFDSVIHL_					0	0	0		PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant;ENSG00000123739|ENST00000243501|PLA2G12A	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.8089477419853	2	528.808042	1055.60153	2.1368	0.00113	0.027929	1.4769E-05	2.1647	0.0011447	528.8078767785868	81.732	0.30278	81.732	81.582	81.885	0					20	9	3	0	0	0	0.1735	2	34024	34024;34074		36.044	5.8194	1	1746700			18693	2200	9025	9064	21669;21670	21669					0.07595503999755238
LLFDSVIHL	9	Unmodified	_LLFDSVIHL_					0	0	0		PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant;ENSG00000123739|ENST00000243501|PLA2G12A	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8102905154228	2	528.808042	1055.60153	2.1729	0.0011491	-0.48211	-0.00025495	1.6908	0.00089413	528.8078248358358	81.219	0.27663	81.509	81.369	81.646	0.29056					15	8	2	0	0	0	0.1735	1	33937	33937		36.044	5.8194	1	1570000			18694	2200	9025	9064	21671	21671					0.07595503999755238
LLFDSVIHL	9	Unmodified	_LLFDSVIHL_					0	0	0		PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant;ENSG00000123739|ENST00000243501|PLA2G12A	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.8093139529228	2	528.808042	1055.60153	2.613	0.0013818	0.57048	0.00030168	3.1835	0.0016834	528.808503333629	80.282	0.34131	81.533	81.357	81.698	1.2512					27	10	3	0	0	0	0.078975	2	33665	33665;33713		56.541	12.134	1	2698200			18695	2200	9025	9064	21672;21673	21672					0.07595503999755238
LLFDSVIHL	9	Unmodified	_LLFDSVIHL_					0	0	0		PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant;ENSG00000123739|ENST00000243501|PLA2G12A	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	PLA2G12A|p.C168Lfs*2|1|0.1|ENSG00000123739|chr4:109714446-109714447|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8091918826103	2	528.808042	1055.60153	1.5463	0.00081771	0.4836	0.00025573	2.0299	0.0010734	528.8084982310827	79.756	0.27801	81.473	81.353	81.631	1.7167					23	8	3	0	0	0	0.04206	1	33451	33451		74.396	20.821	1	2156700			18696	2200	9025	9064	21674	21674					0.07595503999755238
LLFEGEKITI	10	Unmodified	_LLFEGEKITI_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;ENSG00000168255|ENST00000513506|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	581.8405029177666	2	581.839539	1161.66453	1.8319	0.0010659	0.49642	0.00028884	2.3284	0.0013547	581.8396394516612	65.295	0.37862	65.295	65.104	65.482	0					35	11	4	0	0	0	0.066442	2	27222	27175;27222		111.31	43.471	1	4185600			18697	5298	9026	9065	21675;21676	21676					0.09016024997140448
LLFEGEKITI	10	Unmodified	_LLFEGEKITI_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;ENSG00000168255|ENST00000513506|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	581.8408691287041	2	581.839539	1161.66453	1.8039	0.0010496	0.72121	0.00041963	2.5251	0.0014692	581.8397218692573	64.726	0.34227	65.053	64.884	65.226	0.32689					32	10	4	0	0	0	0.055952	2	27080	27080;27126		135.86	56.267	1	6309200			18698	5298	9026	9065	21677;21678	21677					0.09016024997140448
LLFEGEKITI	10	Unmodified	_LLFEGEKITI_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;ENSG00000168255|ENST00000513506|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8406249880791	2	581.839539	1161.66453	2.2635	0.001317	0.43558	0.00025344	2.6991	0.0015705	581.8397713428808	63.537	0.39519	64.95	64.723	65.118	1.4134					40	12	4	0	0	0	0.045213	2	26603	26603;26651		94.909	41.589	1	19103000			18699	5298	9026	9065	21679;21680	21679					0.09016024997140448
LLFEGEKITI	10	Unmodified	_LLFEGEKITI_					0	0	0		nc|ENSG00000285437|Q9H1A7|POLR2J3;ENSG00000228049|ENST00000333432|POLR2J2;ENST00000504101.1_1_7:102210280-102212998:-|nuORF;nc|ENSG00000228049|Q9GZM3-2|POLR2J2;ENSG00000168255|ENST00000513506|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	nc|ENSG00000285437|Q9H1A7|POLR2J3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8413574099541	2	581.839539	1161.66453	2.2745	0.0013234	0.29502	0.00017166	2.5695	0.001495	581.839687555768	62.915	0.40047	64.86	64.658	65.058	1.9444					39	12	4	0	0	0	0.04309	2	26417	26368;26417		96.936	47.003	1	18374000			18700	5298	9026	9065	21681;21682	21682					0.09016024997140448
LLFERATFL	9	Unmodified	_LLFERATFL_					0	0	0		ENSG00000155876|ENST00000380527|RRAGA;ENSG00000083750|ENST00000374941|RRAGB;nc|ENSG00000083750|Q5VZM2|RRAGB	ENSG00000155876|ENST00000380527|RRAGA	ENSG00000155876|ENST00000380527|RRAGA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	554.7789184451103	2	555.321317	1108.62808	1.8473	0.0010258	-1.5857	-0.00088056	0.26164	0.00014529	555.3198836806952	66.487	0.24502	67.876	67.782	68.027	1.3887					17	7	3	0	0	0	0.076673	1	27915	27915		36.127	0	1	1255000			18701	1043	9027	9066	21683	21683					0.07811192891063001
LLFERICL	8	Unmodified	_LLFERICL_					0	0	0		tr|A0A553SSI7|A0A553SSI7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03150PE=4SV=1	tr|A0A553SSI7|A0A553SSI7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03150PE=4SV=1	tr|A0A553SSI7|A0A553SSI7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03150PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	503.7906982302666	2	503.791338	1005.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.094	1	82.374	81.874	82.874	0.2802								0	0	0	1.0178	1	34327	34327		6.3541	0	1				18702	16617	9028	9067	21684	21684					0.06556178956191161
LLFFIKKL	8	Unmodified	_LLFFIKKL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43152048-43164205:+|nuORF	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.2317993044853	3	341.231801	1020.67357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.87	1	104.87	104.37	105.37	0								0	0	0	1.0178	1	44371	44371		0	0	1				18703	669	9029	9068	21685	21685					0.1640646314414198
LLFFVLLF	8	Unmodified	_LLFFVLLF_					0	0	0		L1MA4A_dup2646|chr7:55461716-55462655:-|2.470314538974461|0.4304615177296836|2.52|429.0|47|1|anti-sense	L1MA4A_dup2646|chr7:55461716-55462655:-|2.470314538974461|0.4304615177296836|2.52|429.0|47|1|anti-sense	L1MA4A_dup2646|chr7:55461716-55462655:-|2.470314538974461|0.4304615177296836|2.52|429.0|47|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3201476931572	2	506.317515	1010.62048	4.6982	0.0023788	-3.7615	-0.0019045	0.93666	0.00047425	506.31734820911026	88.469	0.66985	89.916	89.476	90.146	1.4467					44	20	3	0	0	0	0.5848	3	37208	37208;37274;37341		41.817	0	1	1364800			18704	7693	9030	9069	21686;21687;21688	21686					0.11559085361466259
LLFGGGGGG	9	Unmodified	_LLFGGGGGG_					0	0	0		ENST00000428095.1_1_3:196098887-196159300:-|nuORF	ENST00000428095.1_1_3:196098887-196159300:-|nuORF	ENST00000428095.1_1_3:196098887-196159300:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	367.6967040896416	2	367.695221	733.375889	-0.83278	-0.00030621	3.6364	0.0013371	2.8036	0.0010309	367.6967158655035	15.444	0.18609	16.271	16.138	16.324	0.82643					12	5	3	0	0	0	0.64949	1	6413	6413		9.3474	0	1	2042000			18705	6480	9031	9070	21689	21689					-0.00146400399603408
LLFHFCIFHRR	11	Unmodified	_LLFHFCIFHRR_					0	0	0		ENSG00000205442|ENST00000543880|IZUMO3	ENSG00000205442|ENST00000543880|IZUMO3	ENSG00000205442|ENST00000543880|IZUMO3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	496.6050292849541	3	496.939686	1487.79723	1.5303	0.00076045	-2.2509	-0.0011186	-0.72067	-0.00035813	496.93836591198726	43.225	0.3055	43.225	43.028	43.333	0					16	9	2	0	0	0	0.14606	1	18068	18068		2.8433	1.3882	1	702170			18706	5182	9032	9071	21690	21690					0.07284190972768556
LLFHRVAK	8	Unmodified	_LLFHRVAK_					0	0	0			REV__nc|ENSG00000066279|Q8IZT6-2|ASPM	REV__nc|ENSG00000066279|Q8IZT6-2|ASPM	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	492.2801696658134	2	492.311087	982.60762	3.3693	0.0016588	-1.8899	-0.00093041	1.4794	0.00072835	492.3112033256639	107.12	0.1628	107.28	107.19	107.36	0.16174					12	7	3	0	0	0	2.3239	1	45893	45893		0.69038	0	1	3216000	+		18707	8682	9033	9072	21691	21691					0.11562067021941402
LLFISIILTFK	11	Unmodified	_LLFISIILTFK_					0	0	0		ENST00000447781.2_1_1:153352418-153352502:-|nuORF;ENST00000604542.1_1_3:72933577-72933772:+|nuORF;ENSG00000104341|ENST00000521545|LAPTM4B;nc|ENSG00000104341|Q86VI4|LAPTM4B	ENST00000447781.2_1_1:153352418-153352502:-|nuORF	ENST00000447781.2_1_1:153352418-153352502:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.4192993044853	2	654.4205	1306.82645	3.2246	0.0021102	-2.0078	-0.0013139	1.2168	0.00079628	654.4190058991967	107.27	0.15437	107.42	107.33	107.49	0.15795					24	7	6	0	0	0	1.0393	1	46039	46039		0.35063	0	1	69416000			18708	1458	9034	9073	21692	21692					0.1853061375006746
LLFLAWVCFLF	11	Unmodified	_LLFLAWVCFLF_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35094156-35095562:-|nuORF;ENST00000474436.1_1_9:35093318-35095562:-|nuORF;nc|ENSG00000165282|Q8TEQ8-2|PIGO	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	686.3943359255791	2	686.38032	1370.74609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.996	1	96.398	95.898	96.898	0.40208								0	0	0	0.63771	1	40384	40384		10.824	1.4408	1				18709	3827	9035	9074	21693	21693					0.07554429155379694
LLFLKKKKKK	10	Unmodified	_LLFLKKKKKK_					0	0	0		ENST00000344423.9_1_8:28205640-28205820:-|nuORF	ENST00000344423.9_1_8:28205640-28205820:-|nuORF	ENST00000344423.9_1_8:28205640-28205820:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	425.3087951540947	3	425.307593	1272.90095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.72	1	102.78	102.28	103.28	0.062805								0	0	0	0.66264	1	43035	43035		0	0	1				18710	5958	9036	9075	21694	21694					0.27541421352088946
LLFLPYGVSVD	11	Unmodified	_LLFLPYGVSVD_					0	0	0		tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	tr|A0A553SPJ8|A0A553SPJ8_NIACIM3familyoligoendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_26390PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3437377810478	2	611.839539	1221.66453	3.2077	0.0019626	-0.26519	-0.00016225	2.9425	0.0018003	612.341528005147	86.398	0.49324	87.525	87.147	87.641	1.1265					32	19	2	0	0	0	1.0366	1	36277	36277		1.1933	0	1	65670000			18711	16475	9037	9076	21695	21695					0.06256024997128407
LLFLQDPV	8	Unmodified	_LLFLQDPV_					0	0	0		ENST00000479736.1_1_13:98654746-98654878:+|nuORF	ENST00000479736.1_1_13:98654746-98654878:+|nuORF	ENST00000479736.1_1_13:98654746-98654878:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7745544314384	2	472.776211	943.537869	2.3848	0.0011275	-2.6013	-0.0012298	-0.2165	-0.00010236	472.77427350352303	39.521	0.28173	39.834	39.673	39.955	0.31263					13	8	2	0	0	0	0.76103	1	16596	16596		24.674	3.1369	1	940090			18712	6812	9038	9077	21696	21696					0.06384143562650024
LLFNTALSLFH	11	Unmodified	_LLFNTALSLFH_					0	0	0			REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	425.9078246951103	3	425.908046	1274.70231	0.95693	0.00040756	-2.5289	-0.0010771	-1.572	-0.00066953	425.9070686058222	20.905	0.31228	21.115	20.915	21.227	0.21024					22	9	3	0	0	0	0.9945	1	8657	8657		4.1166	1.0444	1	877250	+		18713	11959	9039	9078	21697	21697					0.07594535982593698
LLFPESIRV	9	Unmodified	_LLFPESIRV_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.3225585818291	2	537.321317	1072.62808	1.7226	0.00092557	0.61634	0.00033117	2.3389	0.0012567	537.3214573024977	65.321	0.40973	65.321	65.104	65.513	0					30	12	3	0	0	0	0.11669	1	27210	27210		43.772	7.7282	1	3064400			18714	4990	9040	9079	21698	21698					0.09467192891088416
LLFPESIRV	9	Unmodified	_LLFPESIRV_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.3221313357353	2	537.321317	1072.62808	1.9704	0.0010587	0.52391	0.00028151	2.4943	0.0013402	537.3216152849764	64.727	0.40642	65.053	64.852	65.258	0.32689					28	12	3	0	0	0	0.20244	1	27146	27146		32.786	3.7041	1	5143300			18715	4990	9040	9079	21699	21699					0.09467192891088416
LLFPESIRV	9	Unmodified	_LLFPESIRV_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3228027224541	2	537.321317	1072.62808	2.583	0.0013879	0.50166	0.00026955	3.0846	0.0016574	537.321683370173	63.443	0.42889	64.857	64.626	65.055	1.4134					32	13	3	0	0	0	0.04812	2	26615	26568;26615		69.105	12.928	1	7213300			18716	4990	9040	9079	21700;21701	21701					0.09467192891088416
LLFPESIRV	9	Unmodified	_LLFPESIRV_					0	0	0		TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant;ENSG00000197226|ENST00000355235|TBC1D9B;nc|ENSG00000197226|Q66K14|TBC1D9B	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	TBC1D9B|p.G1112Vfs*34|1|0.27|ENSG00000197226|chr5:179863866-179863867|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3231078982353	2	537.321317	1072.62808	2.5481	0.0013692	0.10509	5.6467E-05	2.6532	0.0014256	537.3214554687218	62.915	0.43001	64.86	64.597	65.027	1.9444					35	13	4	0	0	0	0.04812	2	26403	26356;26403		69.105	16.837	1	7203100			18717	4990	9040	9079	21702;21703	21703					0.09467192891088416
LLFSCRGLEIC	11	Unmodified	_LLFSCRGLEIC_					0	0	0		L1MA6_dup23|chr1:41167702-41170310:-|1.7687493242313057|0.4095800054028756|2.11|429.0|184|3|anti-sense	L1MA6_dup23|chr1:41167702-41170310:-|1.7687493242313057|0.4095800054028756|2.11|429.0|184|3|anti-sense	L1MA6_dup23|chr1:41167702-41170310:-|1.7687493242313057|0.4095800054028756|2.11|429.0|184|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.3281127810478	2	627.322676	1252.6308	3.9001	0.0024466	2.6752	0.0016782	6.5752	0.0041248	627.3243584397862	92.944	0.42592	93.815	93.572	93.998	0.87176					40	12	4	0	0	0	0.66633	1	39057	39057		19.257	2.1441	1	10025000			18718	7694	9041	9080	21704	21704					0.014589569621193732
LLFTKAVV	8	Unmodified	_LLFTKAVV_					0	0	0			REV__ENSG00000177990|ENST00000324472|DPY19L2	REV__ENSG00000177990|ENST00000324472|DPY19L2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1202880740166	2	445.789121	889.56369	2.5349	0.00113	-0.036383	-1.6219E-05	2.4985	0.0011138	445.78856441716675	40.075	0.21363	41.385	41.269	41.483	1.3102					11	6	2	0	0	0	2.3239	1	16798	16798		2.8892	0	1	1143500	+		18719	11232	9042	9081	21705	21705					0.11449037804936779
LLFVFKLLK	9	Unmodified	_LLFVFKLLK_					0	0	0		tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2496520876884	3	374.254606	1119.74199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.86	1	100.86	100.36	101.36	0								0	0	0	0.42693	1	42225	42225		0.26902	0	1				18720	16283	9043	9082	21706	21706					0.1869070772397663
LLFVFKLLK	9	Unmodified	_LLFVFKLLK_					0	0	0		tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	tr|A0A553SKC1|A0A553SKC1_NIACIStageVsporulationproteinBOS=NialliacirculansOX=1397GN=spoVBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2490417361259	3	374.254606	1119.74199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.71	1	100.78	100.28	101.28	0.069061								0	0	0	0.42693	1	42165	42165		0.26902	0	1				18721	16283	9043	9082	21707	21707					0.1869070772397663
LLFVNIQQV	9	Unmodified	_LLFVNIQQV_					0	0	0			REV__ENST00000270517.11_2_19:11616877-11616997:-|nuORF	REV__ENST00000270517.11_2_19:11616877-11616997:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.3229247927666	2	537.321317	1072.62808	1.9704	0.0010587	0.52391	0.00028151	2.4943	0.0013402	537.3216152849764	64.727	0.40642	65.053	64.852	65.258	0.32689					28	12	3	0	0	0	0.24063	1	27077	27077		28.487	2.2187	1	5143300	+		18722	12233	9044	9083	21708	21708					0.09467192891065679
LLFVPFELV	9	Unmodified	_LLFVPFELV_					0	0	0			REV__chr5:124062510-124213455|90|11.21|0.0|12.03|-|0|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|107	REV__chr5:124062510-124213455|90|11.21|0.0|12.03|-|0|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|107	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8225585818291	2	538.823161	1075.63177	1.907	0.0010276	-3.867	-0.0020836	-1.9599	-0.0010561	538.8209144477495	53.763	0.21663	54.083	53.975	54.192	0.32088					9	6	2	0	0	0	0.5697	1	22512	22512		12.532	3.7861	1	668970	+		18723	8324	9045	9084	21709	21709					0.09697862664938839
LLFYHKQFLEY	11	Unmodified	_LLFYHKQFLEY_					0	0	0		nc|ENSG00000124422|Q9UPT9-2|USP22;ENSG00000124422|ENST00000261497|USP22	nc|ENSG00000124422|Q9UPT9-2|USP22	nc|ENSG00000124422|Q9UPT9-2|USP22	MSMS	GG20161007_CRH_Patient100_W632_01	3	750.4808837771416	2	750.89792	1499.78129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.318	1	96.74	96.24	97.24	0.4212								0	0	0	0.63775	1	40529	40529		2.7352	1.2533	1				18724	2227	9046	9085	21710	21710					0.05138763216905318
LLFYMHILI	9	Unmodified	_LLFYMHILI_					0	0	0			REV__ENST00000302550.15_1_1:244869869-244869953:+|nuORF	REV__ENST00000302550.15_1_1:244869869-244869953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	581.8406860232353	2	581.838288	1161.66202	1.8039	0.0010496	2.8717	0.0016708	4.6755	0.0027204	581.8397218692573	64.726	0.34227	65.053	64.884	65.226	0.32689					32	10	4	0	0	0	0.39097	1	27172	27172		20.871	1.5093	1	6309200	+		18725	12321	9047	9086	21711	21711					0.0876589805848198
LLFYMPTHLL	10	Unmodified	_LLFYMPTHLL_					0	0	0			REV__ENSG00000176253|ENST00000641904|OR4K13	REV__ENSG00000176253|ENST00000641904|OR4K13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	624.2399780154228	2	624.346477	1246.6784	1.9399	0.0012112	0.31412	0.00019612	2.2541	0.0014073	624.3457692817507	84.538	0.15443	86.134	86.064	86.219	1.5962					5	4	2	0	0	0	0.12513	1	35445	35445		7.9102	0	1	538580	+		18726	11174	9048	9087	21712	21712					0.06492979224594819
LLFYTCVI	8	Unmodified	_LLFYTCVI_					0	0	0			REV__ENST00000485093.1_1_10:98286995-98287879:-|nuORF	REV__ENST00000485093.1_1_10:98286995-98287879:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2679015994072	2	486.267164	970.519776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.821	1	82.517	82.017	83.017	1.6959								0	0	0	1.0178	1	33908	33908		11.114	0	1		+		18727	8775	9049	9088	21713	21713					0.03333685316295032
LLGAASNSCHI	11	Unmodified	_LLGAASNSCHI_					0	0	0			REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2761108279228	2	543.274041	1084.53353	2.6197	0.0014232	3.4442	0.0018711	6.0639	0.0032944	543.2763482200249	79.996	0.4027	81.247	81.048	81.45	1.2512					20	12	2	0	0	0	0.37492	1	33575	33575		27.629	0.74515	1	1217000	+		18728	15113	9050	9089	21714	21714					-0.005356889225595296
LLGAASNSCHI	11	Unmodified	_LLGAASNSCHI_					0	0	0			REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	543.274041	1084.53353	2.6197	0.0014232	3.4442	0.0018711	6.0639	0.0032944	543.2763482200249	79.996	0.4027	81.247	81.048	81.45	1.2512	0.041898	0.0012072	NaN	27.629	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1217000	+		18729	15113	9050	9089							-0.005356889225595296
LLGAASNSCHI	11	Unmodified	_LLGAASNSCHI_					0	0	0			REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	REV__tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	543.274041	1084.53353	1.662	0.00090293	-1.1912	-0.00064714	0.47082	0.00025579	543.2754302978915	79.447	0.43066	81.164	80.982	81.413	1.7167	-0.041898	-0.0038294	NaN	27.629	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	707040	+		18730	15113	9050	9089							-0.005356889225595296
LLGANKIALP	10	Unmodified	_LLGANKIALP_					0	0	0			REV__SLC36A3|p.P355Qfs*16|1|0.05|ENSG00000186334|chr5:151281094-151281095|-/CT|frameshift_variant	REV__SLC36A3|p.P355Qfs*16|1|0.05|ENSG00000186334|chr5:151281094-151281095|-/CT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.3245422244072	2	505.32386	1008.63317	1.7658	0.00089229	-0.291	-0.00014705	1.4748	0.00074524	505.32405081499314	71.21	2.1849	71.21	70.811	72.996	0					171	68	5	0	0	0	0.6819	1	29855	29855		19.257	2.1441	1	185410000	+		18731	11497	9051	9090	21715	21715					0.12919496753693238
LLGARGHT	8	Unmodified	_LLGARGHT_					0	0	0			REV__ENST00000487855.1_1_2:220145378-220147307:+|nuORF	REV__ENST00000487855.1_1_2:220145378-220147307:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.8004638552666	2	412.740494	823.466435	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.524	1	60.493	59.993	60.993	1.969								0	0	0	1.0178	1	24550	24550		2.5775	0	1		+		18732	13404	9052	9091	21716	21716					0.047640686486602135
LLGEKSITL	9	Unmodified	_LLGEKSITL_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.3013183474541	2	487.30005	972.585547	1.7713	0.00086316	1.3059	0.00063638	3.0772	0.0014995	487.3006503313493	43.353	0.43825	43.353	43.149	43.587	0					41	13	4	0	0	0	0.091139	1	18102	18102		52.268	6.2474	1	11133000	+		18733	11133	9053	9092	21717	21717					0.09815797762848888
LLGELPRLLLL	11	Unmodified	_LLGELPRLLLL_					0	0	0		nc|ENSG00000196352|P08174-4|CD55;ENSG00000196352|ENST00000367064|CD55;nc|ENSG00000196352|P08174-3|CD55;ENST00000488171.5_1_1:207495110-207510876:+|nuORF;nc|ENSG00000196352|P08174-5|CD55;nc|ENSG00000196352|P08174-2|CD55;CD55-UBE2G2|1|fusion;nc|ENSG00000196352|P08174-6|CD55;nc|ENSG00000196352|P08174-7|CD55	nc|ENSG00000196352|P08174-4|CD55	nc|ENSG00000196352|P08174-4|CD55	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.4176513552666	2	625.415749	1248.81694	3.8991	0.0024385	-0.90509	-0.00056606	2.994	0.0018725	625.4152371051067	93.272	0.45171	94.144	93.965	94.417	0.87176					30	13	3	0	0	0	0.032963	2	39289	39239;39289		70.929	32.314	1	2329200			18734	130	9054	9093	21718;21719	21719					0.20248845464561782
LLGELPRLLLL	11	Unmodified	_LLGELPRLLLL_					0	0	0		nc|ENSG00000196352|P08174-4|CD55;ENSG00000196352|ENST00000367064|CD55;nc|ENSG00000196352|P08174-3|CD55;ENST00000488171.5_1_1:207495110-207510876:+|nuORF;nc|ENSG00000196352|P08174-5|CD55;nc|ENSG00000196352|P08174-2|CD55;CD55-UBE2G2|1|fusion;nc|ENSG00000196352|P08174-6|CD55;nc|ENSG00000196352|P08174-7|CD55	nc|ENSG00000196352|P08174-4|CD55	nc|ENSG00000196352|P08174-4|CD55	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.4179565310478	2	625.415749	1248.81694	2.7183	0.0017001	-0.48966	-0.00030624	2.2286	0.0013938	625.4155425223373	92.726	0.38527	94.003	93.843	94.228	1.277					28	11	3	0	0	0	0.067727	2	39024	39024;39079		62.869	28.621	1	2086500			18735	130	9054	9093	21720;21721	21720					0.20248845464561782
LLGELPRLLLL	11	Unmodified	_LLGELPRLLLL_					0	0	0		nc|ENSG00000196352|P08174-4|CD55;ENSG00000196352|ENST00000367064|CD55;nc|ENSG00000196352|P08174-3|CD55;ENST00000488171.5_1_1:207495110-207510876:+|nuORF;nc|ENSG00000196352|P08174-5|CD55;nc|ENSG00000196352|P08174-2|CD55;CD55-UBE2G2|1|fusion;nc|ENSG00000196352|P08174-6|CD55;nc|ENSG00000196352|P08174-7|CD55	nc|ENSG00000196352|P08174-4|CD55	nc|ENSG00000196352|P08174-4|CD55	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	625.415749	1248.81694	2.5859	0.0016173	0.41658	0.00026053	3.0025	0.0018778	625.4161032868656	94.187	0.34695	94.331	94.133	94.48	0.14493	0.17216	0.00083917	NaN	70.929	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1022900			18736	130	9054	9093							0.20248845464561782
LLGFGGNG	8	Unmodified	_LLGFGGNG_					0	0	0		tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	tr|A0A7D6VP68|A0A7D6VP68_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_21885PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	367.6969177126884	2	367.695221	733.375889	-0.1176	-4.3241E-05	3.5629	0.0013101	3.4453	0.0012668	367.69675247009786	15.341	0.21095	16.38	16.247	16.458	1.0392					12	6	3	0	0	0	0.87106	1	6357	6357		14.582	5.2343	1	2253200			18737	16757	9055	9094	21722	21722					-0.0014640039961477669
LLGFLVDTHI	10	Unmodified	_LLGFLVDTHI_					0	0	0			REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	REV__ENST00000587044.1_1_17:41568567-41594747:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3289062380791	2	564.326599	1126.63865	2.4417	0.0013779	0.1426	8.0474E-05	2.5843	0.0014584	564.3263537851044	47.538	0.66508	48.92	48.663	49.328	1.3825					50	20	4	0	0	0	0.62746	1	19956	19956		21.747	4.6338	1	5538700	+		18738	8694	9056	9095	21723	21723					0.08039175545536636
LLGFMSYDRY	10	Unmodified	_LLGFMSYDRY_					0	0	0		ENSG00000187080|ENST00000366480|OR2AK2;nc|ENSG00000187080|Q8NG84|OR2AK2	ENSG00000187080|ENST00000366480|OR2AK2	ENSG00000187080|ENST00000366480|OR2AK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5400268435478	3	422.205875	1263.59579	1.1139	0.00047028	-0.84966	-0.00035873	0.2642	0.00011155	422.2055029769402	92.522	0.42258	92.522	92.321	92.744	0					34	13	4	0	0	0	0.81255	1	38660	38660		10.899	0.099449	1	1639100			18739	4815	9057	9096	21724	21724					-0.025459625742087155
LLGGAGLGV	9	Unmodified	_LLGGAGLGV_					0	0	0		ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	756.4632446169853	1	756.461416	755.454139	2.379	0.0017996	0.21976	0.00016624	2.5988	0.0019659	756.4616471084942	57.993	0.31815	58.316	58.142	58.46	0.32298					14	9	2	0	0	0	0.16975	1	24305	24305		36.466	0	1	723130			18740	5551	9058	9097	21725	21725					0.06663032185622342
LLGGAGLGV	9	Unmodified	_LLGGAGLGV_					0	0	0		ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	756.4617187380791	1	756.461416	755.454139	0.62384	0.00047191	0.31188	0.00023593	0.93572	0.00070784	756.4613996121899	56.288	0.3378	58.257	58.026	58.364	1.9684					17	10	2	0	0	0	0.08022	2	23629	23576;23629		56.048	0	1	2996600			18741	5551	9058	9097	21726;21727	21727					0.06663032185622342
LLGGAGLGV	9	Unmodified	_LLGGAGLGV_					0	0	0		ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	ENST00000232564.7_1_3:179169144-179169282:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	756.461416	755.454139	2.0832	0.0015759	0.97048	0.00073413	3.0537	0.00231	756.4619786771311	58.453	0.32355	58.453	58.266	58.59	0	0.13905	0.00054392	NaN	56.048	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785250			18742	5551	9058	9097							0.06663032185622342
LLGGAYIYI	9	Unmodified	_LLGGAYIYI_					0	0	0		nc|ENSG00000100095|Q9BYH1-2|SEZ6L;nc|ENSG00000100095|Q9BYH1-3|SEZ6L;nc|ENSG00000100095|Q9BYH1-5|SEZ6L;nc|ENSG00000100095|Q9BYH1-4|SEZ6L;nc|ENSG00000100095|Q9BYH1-7|SEZ6L;nc|ENSG00000100095|Q9BYH1-6|SEZ6L;ENSG00000100095|ENST00000248933|SEZ6L	nc|ENSG00000100095|Q9BYH1-2|SEZ6L	nc|ENSG00000100095|Q9BYH1-2|SEZ6L	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7859985232353	2	491.784036	981.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.917	1	78.685	78.185	79.185	1.7672								0	0	0	0.17226	1	32262	32262		28.173	0	1				18743	1239	9059	9098	21728	21728					0.062004300797070755
LLGGGGLIIV	10	Unmodified	_LLGGGGLIIV_					0	0	0			REV__ENSG00000102967|ENST00000219240|DHODH	REV__ENSG00000102967|ENST00000219240|DHODH	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5369445681572	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.752	1	26.004	25.504	26.504	0.25197								0	0	0	0.66155	1	10754	10754		0.77653	0	1		+		18744	9092	9060	9099	21729	21729					0.1262842283366581
LLGGWKYSSF	10	Unmodified	_LLGGWKYSSF_					0	0	0		ENSG00000139899|ENST00000267406|CBLN3	ENSG00000139899|ENST00000267406|CBLN3	ENSG00000139899|ENST00000267406|CBLN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.3047973513603	2	579.303124	1156.5917	3.3217	0.0019243	-2.8578	-0.0016555	0.46392	0.00026875	579.3014721010651	72.864	0.62309	74.194	73.883	74.506	1.3298					54	19	4	0	0	0	0.73251	1	30620	30620		16.942	3.0362	1	3798300			18745	2897	9061	9100	21730	21730					0.0196631599437751
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	657.6399413943291	1	657.393002	656.385725	1.4895	0.00097921	2.5619	0.0016842	4.0515	0.0026634	657.3945967443793	107.36	0.12494	107.36	107.29	107.41	0					8	5	2	0	0	0	2.3239	1	45964	45964		0	0	1	4450900	+		18746	15084	9062	9101	21731	21731					0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	329.3235961794853	2	329.200139	656.385725	-0.049843	-1.6408E-05	3.9956	0.0013153	3.9457	0.0012989	329.20109891130755	19.512	0.18249	19.705	19.562	19.744	0.19342					8	5	2	0	0	0	0.89198	1	8070	8070		0	0	1	114230	+		18747	15084	9062	9101	21732	21732					0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0053893923759	2	329.200139	656.385725	0.28513	9.3865E-05	4.1477	0.0013654	4.4328	0.0014593	329.2014216953953	25.739	0.4293	25.991	25.705	26.134	0.25197					18	13	2	0	0	0	2.3239	1	10763	10763		0	0	1	468710	+		18748	15084	9062	9101	21733	21733					0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	657.6403686404228	1	657.393002	656.385725	2.9599	0.0019458	0.052984	3.4832E-05	3.0129	0.0019806	657.3926152997255	107.31	0.094284	107.47	107.41	107.51	0.15781					6	4	2	0	0	0	2.3239	1	46137	46137		0	0	1	5468000	+		18749	15084	9062	9101	21734	21734					0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0052368044853	2	329.200139	656.385725	0.0091659	3.0174E-06	3.4342	0.0011305	3.4434	0.0011336	329.2011404865355	24.206	0.2749	25.891	25.753	26.028	1.6845					13	8	2	0	0	0	2.3239	1	10131	10131		0	0	1	543460	+		18750	15084	9062	9101	21735	21735					0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	329.200139	656.385725	-0.049843	-1.6408E-05	3.9956	0.0013153	3.9457	0.0012989	329.20109891130755	19.512	0.18249	19.705	19.562	19.744	0.19342	-0.033946	0.00022542	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	114230	+		18751	15084	9062	9101							0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	329.200139	656.385725	-0.6035	-0.00019867	2.4743	0.00081455	1.8708	0.00061587	329.20026558282854	18.794	0.20749	19.773	19.595	19.803	0.97922	0.033946	-0.00077619	NaN	0	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89438	+		18752	15084	9062	9101							0.04378787605776324
LLGIAGGG	8	Unmodified	_LLGIAGGG_					0	0	0			REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	REV__tr|A0A553SPC7|A0A553SPC7_NIACI2-dehydropantoate2-reductaseOS=NialliacirculansOX=1397GN=CEQ21_26025PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	329.200139	656.385725	0.14595	4.8048E-05	3.289	0.0010827	3.435	0.0011308	329.20113404747997	24.597	0.21192	25.838	25.67	25.882	1.241	-0.068793	-0.00026073	NaN	0	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544380	+		18753	15084	9062	9101							0.04378787605776324
LLGKLPGG	8	Unmodified	_LLGKLPGG_					0	0	0		nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2;ENST00000299598.11_1_16:81199358-81222588:-|nuORF;ENST00000533478.5_1_16:81174978-81214887:-|nuORF	nc|ENSG00000166473|Q7Z442-2|PKD1L2	nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7458679080009	2	377.744714	753.474875	1.9587	0.00073988	2.7811	0.0010505	4.7398	0.0017904	377.74560509741656	72.742	1.6542	73.067	72.674	74.328	0.32494					105	52	5	0	0	0	0.89178	2	30373	30373;30421		0.69038	0	1	8495900			18754	7918	9063	9102	21736;21737	21736					0.08827622565297588
LLGLATILG	9	Unmodified	_LLGLATILG_					0	0	0			REV__tr|A0A553SIR7|A0A553SIR7_NIACIZIPfamilymetaltransporterOS=NialliacirculansOX=1397GN=CEQ21_15370PE=4SV=1	REV__tr|A0A553SIR7|A0A553SIR7_NIACIZIPfamilymetaltransporterOS=NialliacirculansOX=1397GN=CEQ21_15370PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	870.5682250857353	1	870.565881	869.558604	2.1253	0.0018502	0.17865	0.00015553	2.304	0.0020058	870.5669343629038	91.182	0.28187	91.182	90.999	91.281	0					12	8	2	0	0	0	0.10722	1	38115	38115		46.921	0	1	441870	+		18755	14863	9064	9103	21738	21738					0.11860733942341994
LLGLPIKVN	9	Unmodified	_LLGLPIKVN_					0	0	0			REV__tr|A0A7D6VRR0|A0A7D6VRR0_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=uvrAPE=3SV=1	REV__tr|A0A7D6VRR0|A0A7D6VRR0_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=uvrAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	483.8228637576103	2	483.820953	965.627353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.136	1	75.136	74.636	75.636	0								0	0	0	0.39421	1	31281	31281		9.3474	0	1		+		18756	15421	9065	9104	21739	21739					0.143163982420333
LLGLSRQRRP	10	Unmodified	_LLGLSRQRRP_					0	0	0			REV__ENST00000295025.12_1_2:61108769-61108910:+|nuORF	REV__ENST00000295025.12_1_2:61108769-61108910:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2506591677666	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.437	1	38.437	37.937	38.937	0								0	0	0	0.66218	1	16112	16112		0.77653	0.40986	1		+		18757	12288	9066	9105	21740	21740					0.14134698402403956
LLGMGRHW	8	Unmodified	_LLGMGRHW_					0	0	0			REV__ENST00000340990.9_1_1:202920095-202927322:-|nuORF	REV__ENST00000340990.9_1_1:202920095-202927322:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2592346072197	2	485.257997	968.501441	1.9452	0.00094394	-0.87832	-0.00042621	1.0669	0.00051773	485.2576060170659	42.152	1.6756	43.492	42.987	44.663	1.3399					99	53	2	0	0	0	0.87803	1	17993	17993		10.183	2.2732	1	6327100	+		18758	12493	9067	9106	21741	21741					0.015929881849615413
LLGMLDWS	8	Unmodified	_LLGMLDWS_					0	0	0			REV__ENST00000470943.1_1_19:55177267-55178470:+|nuORF	REV__ENST00000470943.1_1_19:55177267-55178470:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7377807497978	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.88409	1	20243	20243		6.3541	0	1	3535400	+		18759	13282	9068	9107	21742	21742					-0.006403622402103792
LLGNLWRP	8	Unmodified	_LLGNLWRP_					0	0	0		ENST00000437235.7_1_7:35793991-35794075:-|nuORF	ENST00000437235.7_1_7:35793991-35794075:-|nuORF	ENST00000437235.7_1_7:35793991-35794075:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2859985232353	2	484.787444	967.560336	0.51901	0.00025161	0.66182	0.00032084	1.1808	0.00057245	484.78773713039647	24.6	0.3024	26.285	26.118	26.421	1.6845					20	10	3	0	0	0	0.89051	1	10248	10248		2.3027	0	1	4754400			18760	6537	9069	9108	21743	21743					0.07525787750944346
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	848.5265991091728	1	848.524016	847.516739	1.8452	0.0015657	1.4677	0.0012454	3.313	0.0028111	848.5247223476207	56.591	0.38307	56.591	56.427	56.81	0					20	12	2	0	0	0	0.11074	1	23596	23596		45.75	17.577	1	1101300			18761	3204	9070	9109	21744	21744					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7670471072197	2	424.765646	847.516739	1.0291	0.00043714	3.0149	0.0012806	4.044	0.0017178	424.76630412954864	56.655	0.40887	56.655	56.371	56.78	0					20	13	2	0	0	0	0.051525	1	23598	23598		67.413	44.265	1	1529600			18762	3204	9070	9109	21745	21745					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	848.5231811404228	1	848.524016	847.516739	2.2058	0.0018717	-0.53816	-0.00045664	1.6677	0.001415	848.5238129468827	56.224	0.45055	56.545	56.308	56.758	0.32103					24	15	2	0	0	0	0.08022	1	23532	23532		56.048	27.875	1	996040			18763	3204	9070	9109	21746	21746					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	424.7660705447197	2	424.765646	847.516739	1.5057	0.00063955	-0.21546	-9.1519E-05	1.2902	0.00054803	424.7655367322572	55.052	0.60554	56.456	56.152	56.758	1.4048					35	20	2	0	0	0	0.026036	4	22966	22966;23017;23068;23122		93.763	65.276	1	4836600			18764	3204	9070	9109	21747;21748;21749;21750	21747					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	848.5245239138603	1	848.524016	847.516739	1.3191	0.0011193	0.27445	0.00023288	1.5936	0.0013522	848.5244369263543	54.965	0.54495	56.369	56.152	56.697	1.4048					34	18	2	0	0	0	0.035716	3	23027	22978;23027;23111		79.935	41.961	1	3748300			18765	3204	9070	9109	21751;21752;21753	21752					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	424.7662536501884	2	424.765646	847.516739	1.8166	0.00077162	-0.35551	-0.00015101	1.4611	0.00062062	424.76544475180634	54.425	0.64773	56.394	56.192	56.84	1.9684					37	21	2	0	0	0	0.026036	4	22869	22768;22819;22869;22927		93.763	59.063	1	4114300			18766	3204	9070	9109	21754;21755;21756;21757	21756					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	848.5238525271416	1	848.524016	847.516739	1.6819	0.0014271	-0.30336	-0.00025741	1.3786	0.0011697	848.5238691512753	54.483	0.58721	56.451	56.192	56.779	1.9684					33	19	3	0	0	0	0.035716	3	22901	22791;22843;22901		79.935	41.961	1	3324800			18767	3204	9070	9109	21758;21759;21760	21760					0.08688178253805745
LLGPPPVGV	9	Unmodified	_LLGPPPVGV_					0	0	0		ENST00000476727.6_1_9:130931703-130953136:-|nuORF;nc|ENSG00000148337|Q9ULV3-5|CIZ1;nc|ENSG00000148337|Q9ULV3-3|CIZ1;nc|ENSG00000148337|Q9ULV3-4|CIZ1;nc|ENSG00000148337|Q9ULV3-2|CIZ1;ENSG00000148337|ENST00000372938|CIZ1	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	ENST00000476727.6_1_9:130931703-130953136:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	424.765646	847.516739	2.4931	0.001059	0.1905	8.0919E-05	2.6836	0.0011399	424.76581268746094	56.224	0.42314	56.545	56.308	56.731	0.32103	0.032218	-2.4316E-05	NaN	93.763	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1172700			18768	3204	9070	9109							0.08688178253805745
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	476.3217040896416	2	476.32112	950.627687	2.309	0.0010998	-1.46	-0.00069542	0.84902	0.00040441	476.3205659690786	55.642	0.75097	55.642	55.362	56.113	0					93	26	5	0	0	0	0.066815	4	23124	23124;23166;23213;23262		61.357	13.715	1	347450000			18769	4139	9071	9110	21761;21762;21763;21764	21761					0.15039817961894641
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	476.3215515017509	2	476.32112	950.627687	2.8099	0.0013384	-1.8501	-0.00088126	0.95976	0.00045715	476.3204455876711	55.056	0.9929	55.377	55.056	56.049	0.32088					106	32	5	0	0	0	0.045797	4	23004	23004;23046;23082;23131		71.134	13.662	1	398100000			18770	4139	9071	9110	21765;21766;21767;21768	21765					0.15039817961894641
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.3213073611259	2	476.32112	950.627687	1.2857	0.00061243	-1.4397	-0.00068578	-0.15399	-7.3349E-05	476.32056916165925	53.687	1.149	55.088	54.778	55.927	1.4005					138	42	5	0	0	0	0.045797	5	22384	22384;22429;22475;22524;22563		71.134	21.4	1	956450000			18771	4139	9071	9110	21769;21770;21771;21772;21773	21769					0.15039817961894641
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1995422244072	2	476.32112	950.627687	1.622	0.00077257	-1.4798	-0.00070484	0.1422	6.773E-05	476.3203489191331	53.881	0.37633	55.851	55.752	56.128	1.9697					17	11	2	0	0	0	0.1165	1	22540	22540		2.3027	0	1	738420			18772	4139	9071	9110	21774	21774					0.15039817961894641
LLGPRLVLA	9	Unmodified	_LLGPRLVLA_					0	0	0		ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	ENSG00000170348|ENST00000303575|TMED10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	476.32112	950.627687	0.88486	0.00042148	-1.39	-0.00066209	-0.50515	-0.00024061	476.3205492008087	53.111	1.0979	55.081	54.78	55.878	1.9697	-0.0034741	1.6249E-05	NaN	71.134	162	46	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	946550000			18773	4139	9071	9110							0.15039817961894641
LLGQRQLSLLH	11	Unmodified	_LLGQRQLSLLH_					0	0	0			REV__nc|ENSG00000285708|Q9H334-6|FOXP1	REV__nc|ENSG00000285708|Q9H334-6|FOXP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.5937377810478	3	426.594461	1276.76155	0.94984	0.0004052	-2.9905	-0.0012757	-2.0407	-0.00087054	426.59317436499373	41.323	0.54444	41.323	40.923	41.467	0					42	16	3	0	0	0	1.0365	1	17232	17232		1.2148	0	1	1337500	+		18774	9421	9072	9111	21775	21775					0.1342443199682748
LLGRPLAPR	9	Unmodified	_LLGRPLAPR_					0	0	0			REV__ENST00000361162.10_1_20:34330053-34330200:-|nuORF	REV__ENST00000361162.10_1_20:34330053-34330200:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	496.8228637576103	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.682	1	53.682	53.182	54.182	0								0	0	0	0.40883	1	22383	22383		7.9102	2.1497	1		+		18775	12598	9073	9112	21776	21776					0.13293452050652377
LLGRRNGG	8	Unmodified	_LLGRRNGG_					0	0	0		ENST00000588933.5_1_19:9544893-9545835:-|nuORF;ENST00000588221.5_1_19:9530876-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	ENST00000588933.5_1_19:9544893-9545835:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7520934939384	2	421.751393	841.488233	1.9152	0.00080772	0.77929	0.00032867	2.6945	0.0011364	421.75152674690446	69.035	0.42487	70.401	70.22	70.645	1.3657					18	13	2	0	0	0	0.89176	1	28974	28974		0.79363	0	1	915150			18776	7464	9074	9113	21777	21777					0.06114873397245901
LLGSALALL	9	Unmodified	_LLGSALALL_					0	0	0			REV__ENSG00000100263|ENST00000216085|RHBDD3	REV__ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	870.5619994997978	1	870.565881	869.558604	2.2929	0.0019961	-3.327	-0.0028964	-1.0341	-0.00090029	870.5616457066897	82.715	0.21222	82.985	82.847	83.06	0.27029					9	6	2	0	0	0	0.046276	1	34601	34601		70.716	0	1	878010	+		18777	8979	9075	9114	21778	21778					0.11860733942330626
LLGSDLSVL	9	Unmodified	_LLGSDLSVL_					0	0	0			REV__ENSG00000178732|ENST00000692618|GP5	REV__ENSG00000178732|ENST00000692618|GP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	916.5388671755791	1	916.534975	915.527698	1.7254	0.0015814	3.9808	0.0036485	5.7062	0.0052299	916.538431117824	94.247	0.25023	94.247	94.056	94.307	0					11	7	2	0	0	0	0.15478	1	39346	39346		38.151	0	1	784010	+		18778	11252	9076	9115	21779	21779					0.06655535837421667
LLGSGLTIL	9	Unmodified	_LLGSGLTIL_					0	0	0		MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant;ENSG00000109919|ENST00000302503|MTCH2;ENST00000533571.1_1_11:47660575-47664146:-|nuORF;ENST00000539759.5_1_11:47639025-47663996:-|nuORF	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	886.5635864138603	1	886.560795	885.553519	2.0089	0.001781	0.15968	0.00014157	2.1686	0.0019226	886.5613003825646	72.109	0.25058	73.451	73.279	73.53	1.3415					11	7	2	0	0	0	0.087207	1	30271	30271		53.576	0	1	936280			18779	1685	9077	9116	21780	21780					0.10616430079721795
LLGSGLTIL	9	Unmodified	_LLGSGLTIL_					0	0	0		MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant;ENSG00000109919|ENST00000302503|MTCH2;ENST00000533571.1_1_11:47660575-47664146:-|nuORF;ENST00000539759.5_1_11:47639025-47663996:-|nuORF	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MTCH2|p.G188Nfs*7|1|0.1|ENSG00000109919|chr11:47629024-47629025|-/ATTCACTACCTTTGTT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	886.560795	885.553519	1.8496	0.0016398	1.4837	0.0013154	3.3334	0.0029552	886.5627723077004	71.6	0.15905	73.424	73.286	73.445	1.824	-0.013483	0.00088745	NaN	53.576	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	580760			18780	1685	9077	9116							0.10616430079721795
LLGSKRKM	8	Unmodified	_LLGSKRKM_					0	0	0		nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-5|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-2|ARHGAP36;nc|ENSG00000147256|Q6ZRI8-4|ARHGAP36;ENSG00000147256|ENST00000276211|ARHGAP36	nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36	nc|ENSG00000147256|Q6ZRI8-3|ARHGAP36	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	467.3023864626884	2	466.78913	931.563706	3.053	0.0014251	0.38263	0.00017861	3.4356	0.0016037	466.7883780070065	75.881	0.28473	76.202	75.988	76.272	0.32164					9	8	2	0	0	0	2.3239	1	31749	31749		2.5775	0	1	333710			18781	3179	9078	9117	21781	21781					0.09518714533305683
LLGSLGARAGS	11	Unmodified	_LLGSLGARAGS_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2924072146416	2	501.290548	1000.56654	1.6159	0.00081002	0.54537	0.00027339	2.1613	0.0010834	501.2905682671978	67.241	1.5614	67.241	66.577	68.139	0					98	49	3	0	0	0	1.0174	1	28155	28155		2.7352	0.43246	1	1969600			18782	5143	9079	9118	21782	21782					0.06628261191804086
LLGSLILLTV	10	Unmodified	_LLGSLILLTV_					0	0	0		tr|A0A553SKV6|A0A553SKV6_NIACIStageIIIsporulationproteinAEOS=NialliacirculansOX=1397GN=spoIIIAEPE=4SV=1	tr|A0A553SKV6|A0A553SKV6_NIACIStageIIIsporulationproteinAEOS=NialliacirculansOX=1397GN=spoIIIAEPE=4SV=1	tr|A0A553SKV6|A0A553SKV6_NIACIStageIIIsporulationproteinAEOS=NialliacirculansOX=1397GN=spoIIIAEPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	520.7568847537041	2	521.349543	1040.68453	2.249	0.0011725	-2.3868	-0.0012444	-0.1378	-7.184E-05	521.3479634573423	81.426	0.17966	81.426	81.319	81.498	0					8	5	2	0	0	0	0.1179	1	33901	33901		34.402	0	1	790060			18783	16310	9080	9119	21783	21783					0.16581820727742524
LLGSLLLLSL	10	Unmodified	_LLGSLLLLSL_					0	0	0		ENSG00000125650|ENST00000245810|PSPN	ENSG00000125650|ENST00000245810|PSPN	ENSG00000125650|ENST00000245810|PSPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3506957888603	2	521.349543	1040.68453	1.8441	0.00096143	1.1853	0.00061797	3.0294	0.0015794	521.350112287967	79.221	0.31057	80.956	80.753	81.064	1.735					23	9	3	0	0	0	0.092962	1	33211	33211		65.235	6.5562	1	1710300			18784	2267	9081	9120	21784	21784					0.16581820727765262
LLGSPLQLV	9	Unmodified	_LLGSPLQLV_					0	0	0			REV__ENST00000607197.5_1_6:138742172-138742343:+|nuORF	REV__ENST00000607197.5_1_6:138742172-138742343:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	470.3004943728447	2	470.29731	938.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.009	1	78.009	77.509	78.509	0								0	0	0	0.35192	1	32475	32475		13.508	1.8676	1		+		18785	14142	9082	9121	21785	21785					0.10832118971040927
LLGSPPPLLKE	11	Unmodified	_LLGSPPPLLKE_					0	0	0		ENST00000527274.2_1_11:66244918-66245122:-|nuORF	ENST00000527274.2_1_11:66244918-66245122:-|nuORF	ENST00000527274.2_1_11:66244918-66245122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.5717346072197	3	388.572663	1162.69616	0.39031	0.00015166	-1.8708	-0.00072696	-1.4805	-0.00057529	388.57191902025363	90.486	0.61919	90.486	90.193	90.812	0					63	19	5	0	0	0	1.0369	1	37846	37846		1.1098	0.14748	1	38226000			18786	7132	9083	9122	21786	21786					0.1213201775105972
LLGSSGLEACP	11	Unmodified	_LLGSSGLEACP_					0	0	0			REV__ENST00000377705.5_1_1:6585365-6585536:-|nuORF	REV__ENST00000377705.5_1_1:6585365-6585536:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7659789919853	2	523.762975	1045.5114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.928	1	92.294	91.794	92.794	1.366								0	0	0	0.63765	1	38291	38291		18.146	7.3224	1		+		18787	12733	9084	9123	21787	21787					-0.009539133909584052
LLGSSTFCF	9	Unmodified	_LLGSSTFCF_					0	0	0			REV__MAPKBP1|p.I251F|1|0.05|ENSG00000137802|chr15:41813033-41813033|A/T|missense_variant	REV__MAPKBP1|p.I251F|1|0.05|ENSG00000137802|chr15:41813033-41813033|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7354003787041	2	487.736228	973.457904	1.9428	0.00094759	-2.7558	-0.0013441	-0.81298	-0.00039652	487.73469366099437	42.142	1.3138	43.482	43.171	44.485	1.3399					70	41	2	0	0	0	0.49082	2	17680	17628;17680		15.847	1.2655	1	1662300	+		18788	14354	9085	9124	21788;21789	21789					-0.029886661028172057
LLGVLLLGK	9	Unmodified	_LLGVLLLGK_					0	0	0			REV__ENST00000569279.1_1_17:72602458-72602677:+|nuORF	REV__ENST00000569279.1_1_17:72602458-72602677:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	463.3293640017509	2	463.325871	924.637189	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.08	1	103.26	102.76	103.76	0.18066								0	0	0	0.42693	1	43379	43379		0	0	1		+		18789	13954	9086	9125	21790	21790					0.17185586247444462
LLHCAPLPGL	10	Unmodified	_LLHCAPLPGL_					0	0	0		ENST00000361722.7_1_17:45789068-45789260:+|nuORF	ENST00000361722.7_1_17:45789068-45789260:+|nuORF	ENST00000361722.7_1_17:45789068-45789260:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2982665896416	2	517.296788	1032.57902	2.0748	0.0010733	1.5478	0.00080065	3.6225	0.0018739	517.2974395056336	71.497	0.31104	72.839	72.719	73.03	1.3415					15	9	2	0	0	0	0.56346	1	30012	30012		24.674	0	1	3785000			18790	6040	9087	9126	21791	21791					0.06403581330482666
LLHCAPLPGL	10	Unmodified	_LLHCAPLPGL_					0	0	0		ENST00000361722.7_1_17:45789068-45789260:+|nuORF	ENST00000361722.7_1_17:45789068-45789260:+|nuORF	ENST00000361722.7_1_17:45789068-45789260:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	517.296788	1032.57902	1.3057	0.00067543	1.7564	0.00090856	3.062	0.001584	517.29665908617	71.01	0.48932	72.834	72.608	73.098	1.824	-0.0021782	0.00015129	NaN	24.674	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3180200			18791	6040	9087	9126							0.06403581330482666
LLHCKTLHI	9	Unmodified	_LLHCKTLHI_					0	0	0		ENSG00000144357|ENST00000272793|UBR3;nc|ENSG00000144357|Q6ZT12-4|UBR3	ENSG00000144357|ENST00000272793|UBR3	ENSG00000144357|ENST00000272793|UBR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3181640505791	2	539.315512	1076.61647	4.3183	0.0023289	-1.0246	-0.00055259	3.2937	0.0017763	539.3150546838378	94.287	0.62416	95.028	94.7	95.325	0.74124					58	19	5	0	0	0	0.51832	1	39733	39733		14.582	0	1	12816000			18792	3071	9088	9127	21792	21792					0.08122672596095981
LLHDGIPVV	9	Unmodified	_LLHDGIPVV_					0	0	0		nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-2|APAF1;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-6|APAF1	nc|ENSG00000120868|O14727-5|APAF1	nc|ENSG00000120868|O14727-5|APAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7881042361259	2	481.78711	961.559667	2.2632	0.0010904	-0.30106	-0.00014505	1.9621	0.00094534	481.7866954535278	43.978	0.24741	45.331	45.191	45.439	1.3536					10	7	2	0	0	0	0.12174	1	18423	18423		42.095	18.946	1	1317500			18793	2120	9089	9128	21793	21793					0.07734948311224343
LLHDGIPVV	9	Unmodified	_LLHDGIPVV_					0	0	0		nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-2|APAF1;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-6|APAF1	nc|ENSG00000120868|O14727-5|APAF1	nc|ENSG00000120868|O14727-5|APAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7906371951103	2	481.78711	961.559667	1.8595	0.0008959	0.0018229	8.7825E-07	1.8614	0.00089678	481.78714967908695	43.355	0.23482	45.299	45.134	45.368	1.9438					10	7	2	0	0	0	0.09539	1	18158	18158		50.855	18.738	1	846100			18794	2120	9089	9128	21794	21794					0.07734948311224343
LLHDQIAKN	9	Unmodified	_LLHDQIAKN_					0	0	0			REV__nc|ENSG00000047410|P12270-2|TPR	REV__nc|ENSG00000047410|P12270-2|TPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3009521365166	2	526.298373	1050.58219	4.0075	0.0021092	-0.61436	-0.00032334	3.3932	0.0017858	526.2980772821813	95.752	0.30531	96.174	96.039	96.344	0.4212					16	9	3	0	0	0	0.25667	1	40287	40287		27.629	2.9549	1	2275200	+		18795	8608	9090	9129	21795	21795					0.058925477088678235
LLHDQIAKN	9	Unmodified	_LLHDQIAKN_					0	0	0			REV__nc|ENSG00000047410|P12270-2|TPR	REV__nc|ENSG00000047410|P12270-2|TPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2994872927666	2	526.298373	1050.58219	3.3268	0.0017509	-2.2477	-0.001183	1.0791	0.00056794	526.2973681630776	95.489	0.26707	95.891	95.74	96.007	0.40208					14	9	2	0	0	0	0.23535	1	40179	40179		29.082	8.628	1	3058300	+		18796	8608	9090	9129	21796	21796					0.058925477088678235
LLHDWDDN	8	Unmodified	_LLHDWDDN_					0	0	0			REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2308227419853	2	514.227613	1026.44067	1.8222	0.00093703	0.52724	0.00027112	2.3495	0.0012082	514.2282007869682	70.466	0.26575	70.466	70.241	70.507	0					10	8	2	0	0	0	0.88958	1	29327	29327		2.8892	0	1	619700	+		18797	15077	9091	9130	21797	21797					-0.07148870384276051
LLHDWDDN	8	Unmodified	_LLHDWDDN_					0	0	0			REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	514.227613	1026.44067	1.8222	0.00093703	0.52724	0.00027112	2.3495	0.0012082	514.2282007869682	70.466	0.26575	70.466	70.241	70.507	0	0.10565	-0.0024343	NaN	2.8892	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	619700	+		18798	15077	9091	9130							-0.07148870384276051
LLHDWDDN	8	Unmodified	_LLHDWDDN_					0	0	0			REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	514.227613	1026.44067	2.3135	0.0011897	3.5145	0.0018072	5.828	0.0029969	514.2283926977536	68.968	0.53898	70.334	69.904	70.443	1.3657	-0.026301	0.00063792	NaN	2.8892	26	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	926970	+		18799	15077	9091	9130							-0.07148870384276051
LLHDWDDN	8	Unmodified	_LLHDWDDN_					0	0	0			REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	REV__tr|A0A553SP94|A0A553SP94_NIACIDivIVAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25880PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.227613	1026.44067	2.3169	0.0011914	4.3944	0.0022597	6.7112	0.0034511	514.2287383268584	68.412	0.38425	70.282	70.01	70.395	1.87	-0.077998	0.0015428	NaN	2.8892	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533110	+		18800	15077	9091	9130							-0.07148870384276051
LLHESSKGL	9	Unmodified	_LLHESSKGL_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2811157107353	2	492.279649	982.544745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.663	1	91.853	91.353	92.353	0.19042								0	0	0	0.42693	1	38391	38391		4.756	0	1		+		18801	9740	9092	9131	21798	21798					0.05277456443241135
LLHFFLLA	8	Unmodified	_LLHFFLLA_					0	0	0		nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;ENSG00000112414|ENST00000367609|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2010375857353	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.12	1	103.12	102.62	103.62	0								0	0	0	1.0178	1	43241	43241		0.45834	0	1				18802	1785	9093	9132	21799	21799					0.09228744041854497
LLHFFLLA	8	Unmodified	_LLHFFLLA_					0	0	0		nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;ENSG00000112414|ENST00000367609|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2015563845634	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.43	1	103.43	102.93	103.93	0								0	0	0	1.0178	1	43411	43411		0.45834	0	1				18803	1785	9093	9132	21800	21800					0.09228744041854497
LLHFFLLA	8	Unmodified	_LLHFFLLA_					0	0	0		nc|ENSG00000112414|Q86SQ4-2|ADGRG6;nc|ENSG00000112414|Q86SQ4|ADGRG6;nc|ENSG00000112414|Q86SQ4-4|ADGRG6;ENSG00000112414|ENST00000367609|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	nc|ENSG00000112414|Q86SQ4-2|ADGRG6	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2014953494072	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.89	1	101.96	101.46	102.46	0.067009								0	0	0	1.0178	1	42659	42659		1.8442	0	1				18804	1785	9093	9132	21801	21801					0.09228744041854497
LLHFHPLKWRR	11	Unmodified	_LLHFHPLKWRR_					0	0	0			REV__ENST00000382387.3_1_9:214570-214894:-|nuORF	REV__ENST00000382387.3_1_9:214570-214894:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2795287966728	3	501.633362	1501.87826	5.9234	0.0029714	1.5395	0.00077225	7.4629	0.0037436	501.63410546273565	88.578	0.64503	89.635	89.337	89.982	1.0562					32	19	2	0	0	0	0.14606	1	37458	37458		2.6312	2.1253	1	398520	+		18805	12785	9094	9133	21802	21802					0.1473921500717097
LLHFHPLKWRR	11	Unmodified	_LLHFHPLKWRR_					0	0	0			REV__ENST00000382387.3_1_9:214570-214894:-|nuORF	REV__ENST00000382387.3_1_9:214570-214894:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	501.633362	1501.87826	2.3235	0.0011655	3.7978	0.0019051	6.1213	0.0030706	501.6347606790468	89.303	0.66387	89.303	89.083	89.747	0	-0.16574	0.0014108	NaN	2.6312	32	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712020	+		18806	12785	9094	9133							0.1473921500717097
LLHFLWSR	8	Unmodified	_LLHFLWSR_					0	0	0		tr|A0A553SHF2|A0A553SHF2_NIACItRNA(Ile)-lysidinesynthaseOS=NialliacirculansOX=1397GN=tilSPE=3SV=1	tr|A0A553SHF2|A0A553SHF2_NIACItRNA(Ile)-lysidinesynthaseOS=NialliacirculansOX=1397GN=tilSPE=3SV=1	tr|A0A553SHF2|A0A553SHF2_NIACItRNA(Ile)-lysidinesynthaseOS=NialliacirculansOX=1397GN=tilSPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1642944216728	2	536.308544	1070.60253	1.1406	0.00061169	-4.1993	-0.0022521	-3.0588	-0.0016404	536.3063097535768	28.68	0.24536	28.68	28.504	28.749	0					14	7	3	0	0	0	2.3239	1	11959	11959		5.7604	0	1	769540			18807	16148	9095	9134	21803	21803					0.07005763159304479
LLHGLLLHR	9	Unmodified	_LLHGLLLHR_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1626464724541	2	536.342918	1070.67128	-0.084768	-4.5465E-05	-0.49115	-0.00026342	-0.57592	-0.00030889	536.3427903811233	12.364	0.15769	13.058	12.948	13.106	0.69396					7	4	2	0	0	0	0.11645	1	5146	5146		4.756	3.1034	1	638240			18808	4518	9096	9135	21804	21804					0.13877427459033242
LLHGLLLHR	9	Unmodified	_LLHGLLLHR_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	536.342918	1070.67128	0.25765	0.00013819	-0.51948	-0.00027862	-0.26183	-0.00014043	536.3428610596679	12.76	0.12493	12.849	12.74	12.865	0.089381	-0.13361	0.00050965	NaN	4.756	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	340730			18809	4518	9096	9135							0.13877427459033242
LLHGLLLHR	9	Unmodified	_LLHGLLLHR_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000533635.5_1_11:6587803-6591461:+|nuORF;ENST00000525883.5_1_11:6587352-6591461:+|nuORF;ENST00000529821.5_1_11:6587803-6593213:+|nuORF;ENST00000530197.5_1_11:6587352-6593213:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	536.342918	1070.67128	0.27173	0.00014574	-0.95475	-0.00051208	-0.68302	-0.00036634	536.3425250767955	12.168	0.12695	12.956	12.876	13.003	0.78751	-0.026955	4.2741E-05	NaN	4.756	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	947730			18810	4518	9096	9135							0.13877427459033242
LLHKWLKW	8	Unmodified	_LLHKWLKW_					0	0	0			REV__ENST00000367240.6_1_1:203029522-203032974:+|nuORF	REV__ENST00000367240.6_1_1:203029522-203032974:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3478881716728	2	562.342387	1122.67022	1.2031	0.00067655	1.8112	0.0010185	3.0143	0.001695	562.3431565799003	70.004	1.3335	70.326	69.344	70.678	0.32224					80	42	3	0	0	0	0.88958	1	29115	29115		2.8892	0	1	1666400	+		18811	12621	9097	9136	21805	21805					0.11379213090117446
LLHLHRSL	8	Unmodified	_LLHLHRSL_					0	0	0			REV__ENSG00000179055|ENST00000641530|OR13D1	REV__ENSG00000179055|ENST00000641530|OR13D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.8065978884697	2	494.806168	987.597784	1.7452	0.00086353	-1.2224	-0.00060487	0.52274	0.00025865	494.80563392293044	68.601	0.40338	70.454	70.185	70.588	1.853					44	12	5	0	0	0	0.86202	1	28707	28707		15.768	1.8622	1	59259000	+		18812	11267	9098	9137	21806	21806					0.10348879016555657
LLHLLLCL	8	Unmodified	_LLHLLLCL_					0	0	0			REV__ENSG00000184350|ENST00000389832|MRGPRE	REV__ENSG00000184350|ENST00000389832|MRGPRE	MSMS	GG20161007_CRH_Patient100_A02_02	2	313.2020446658134	3	313.201625	936.583045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.41	1	100.48	99.984	100.98	0.072716								0	0	0	1.0178	1	42039	42039		0	0	1		+		18813	11423	9099	9138	21807	21807					0.11221670824181729
LLHLRHNLHL	10	Unmodified	_LLHLRHNLHL_					0	0	0			REV__ENST00000417694.6_1_5:138725541-138725592:-|nuORF	REV__ENST00000417694.6_1_5:138725541-138725592:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5925781130791	3	422.591163	1264.75166	1.7704	0.00074815	2.1761	0.00091959	3.9465	0.0016677	422.59194267234966	36.503	0.52721	36.805	36.518	37.045	0.30197					60	37	2	0	0	0	0.89422	1	15413	15413		2.086	0.1585	1	4810300	+		18814	12954	9100	9139	21808	21808					0.12987288782073847
LLHLVLQETIS	11	Unmodified	_LLHLVLQETIS_					0	0	0		ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	ENSG00000277150|ENST00000622749|F8A3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	422.2056762576103	3	422.586972	1264.73909	2.957	0.0012496	2.5564	0.0010803	5.5135	0.0023299	422.5879004255103	92.409	0.90948	92.577	92.281	93.19	0.16835					45	28	2	0	0	0	0.14606	1	38588	38588		2.6312	0.54523	1	975260			18815	5470	9101	9140	21809	21809					0.11730787808528476
LLHLWVMIV	9	Unmodified	_LLHLWVMIV_					0	0	0		ENSG00000066455|ENST00000163416|GOLGA5	ENSG00000066455|ENST00000163416|GOLGA5	ENSG00000066455|ENST00000163416|GOLGA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3394653201103	2	562.338455	1122.66236	1.8539	0.0010425	-1.8816	-0.0010581	-0.027724	-1.559E-05	562.3376682733963	42.807	0.20965	44.728	44.601	44.811	1.9211					12	6	2	0	0	0	0.51832	1	17930	17930		14.582	0.67564	1	970200			18816	806	9102	9141	21810	21810					0.10593317778329947
LLHNHAFLL	9	Unmodified	_LLHNHAFLL_					0	0	0		ENST00000423620.6_1_8:95718261-95718693:+|nuORF	ENST00000423620.6_1_8:95718261-95718693:+|nuORF	ENST00000423620.6_1_8:95718261-95718693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3179199099541	2	539.313826	1076.6131	4.3183	0.0023289	2.1005	0.0011328	6.4188	0.0034617	539.3150546838378	94.287	0.62416	95.028	94.7	95.325	0.74124					58	19	5	0	0	0	0.64949	1	39606	39606		9.3474	0	1	12816000			18817	6458	9103	9142	21811	21811					0.0778574581374869
LLHNHAFLL	9	Unmodified	_LLHNHAFLL_					0	0	0		ENST00000423620.6_1_8:95718261-95718693:+|nuORF	ENST00000423620.6_1_8:95718261-95718693:+|nuORF	ENST00000423620.6_1_8:95718261-95718693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3154174685478	2	539.313826	1076.6131	3.3666	0.0018156	1.2604	0.00067977	4.627	0.0024954	539.3146721856845	93.781	0.52927	95.058	94.828	95.358	1.277					51	16	4	0	0	0	0.64949	1	39405	39405		9.3474	0	1	10377000			18818	6458	9103	9142	21812	21812					0.0778574581374869
LLHQSIIGL	9	Unmodified	_LLHQSIIGL_					0	0	0		tr|A0A7D6VY19|A0A7D6VY19_9CLOTtryptophansynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14130PE=3SV=1	tr|A0A7D6VY19|A0A7D6VY19_9CLOTtryptophansynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14130PE=3SV=1	tr|A0A7D6VY19|A0A7D6VY19_9CLOTtryptophansynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14130PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.3098022341728	2	497.30821	992.601866	3.1695	0.0015762	0.31192	0.00015512	3.4814	0.0017313	497.30848560160655	74.706	0.6765	76.012	75.728	76.404	1.3063					53	21	3	0	0	0	0.0075027	1	31356	31356		112.59	9.2397	1	15949000			18819	16994	9104	9143	21813	21813					0.10526923719623937
LLHRKGILK	9	Unmodified	_LLHRKGILK_					0	0	0		NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant;ENSG00000163545|ENST00000367157|NUAK2	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3666869997978	2	539.366393	1076.71823	3.2771	0.0017676	-2.4149	-0.0013025	0.86223	0.00046506	539.3649138057898	106.03	0.16669	106.19	106.12	106.28	0.15781					30	8	5	0	0	0	0.83213	1	45282	45282		2.0598	0	1	615730000			18820	3698	9105	9144	21814	21814					0.18294287010166954
LLHRKGILK	9	Unmodified	_LLHRKGILK_					0	0	0		NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant;ENSG00000163545|ENST00000367157|NUAK2	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	539.366393	1076.71823	3.3454	0.0018044	-2.9282	-0.0015794	0.41719	0.00022502	539.3646820680686	106.01	0.18445	106.18	106.09	106.27	0.16174	0.011278	-0.0004269	NaN	2.0598	31	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	673430000			18821	3698	9105	9144							0.18294287010166954
LLHRLRHRL	9	Unmodified	_LLHRLRHRL_					0	0	0			REV__ENSG00000119574|ENST00000594051|ZBTB45	REV__ENSG00000119574|ENST00000594051|ZBTB45	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.1788513064384	3	405.263269	1212.76798	2.8197	0.0011427	2.8344	0.0011487	5.6541	0.0022914	405.26512395150985	93.813	0.12643	93.958	93.878	94.005	0.14493					5	3	2	0	0	0	0.11955	1	39241	39241		0.23584	0	1	173540	+		18822	9545	9106	9145	21815	21815					0.17010414738820145
LLHRLWRSRRR	11	Unmodified	_LLHRLWRSRRR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	387.9911987185478	4	387.991918	1547.93856	-0.21161	-8.2104E-05	-1.2659	-0.00049114	-1.4775	-0.00057325	387.991382208045	39.596	0.71149	39.596	39.235	39.947	0					87	22	5	0	0	0	1.0405	1	16500	16500		0	0	1	14055000			18823	6245	9107	9146	21816	21816					0.18651325390260354
LLHRLWRSRRR	11	Unmodified	_LLHRLWRSRRR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	387.9915038943291	4	387.991918	1547.93856	-0.1905	-7.3911E-05	-0.85994	-0.00033365	-1.0504	-0.00040756	387.9916705865915	40.115	1.0396	40.115	39.852	40.891	0					99	32	5	0	0	0	1.0405	1	16723	16723		0	0	1	12742000			18824	6245	9107	9146	21817	21817					0.18651325390260354
LLHRLWRSRRR	11	Unmodified	_LLHRLWRSRRR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1348144412041	5	310.594989	1547.93856	1.0799	0.00033541	-0.1667	-5.1776E-05	0.91319	0.00028363	310.5949208251743	44.293	1.2196	44.619	44.154	45.374	0.32674					131	40	4	0	0	0	0.14606	1	18829	18829		0	0	1	6063900			18825	6245	9107	9146	21818	21818					0.18651325390260354
LLHRLWRSRRR	11	Unmodified	_LLHRLWRSRRR_					0	0	0		ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1349059939384	5	310.594989	1547.93856	0.44498	0.00013821	-0.35632	-0.00011067	0.088666	2.7539E-05	310.5948065510644	43.091	1.3171	44.444	43.905	45.222	1.3536					156	42	5	0	0	0	0.14606	1	18342	18342		0	0	1	4995200			18826	6245	9107	9146	21819	21819					0.18651325390260354
LLHRPRRT	8	Unmodified	_LLHRPRRT_					0	0	0		ENST00000453256.5_1_7:55540449-55583655:-|nuORF;ENST00000428648.5_1_7:55540449-55639414:-|nuORF;ENST00000418904.5_1_7:55540449-55620397:-|nuORF	ENST00000453256.5_1_7:55540449-55583655:-|nuORF	ENST00000453256.5_1_7:55540449-55583655:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.8284179568291	2	524.827966	1047.64138	2.5131	0.0013189	-1.5627	-0.00082015	0.95038	0.00049878	524.8272676027741	83.98	0.93058	83.98	83.627	84.558	0					87	29	5	0	0	0	0.89176	1	34897	34897		0.79363	0	1	213410000			18827	6430	9108	9147	21820	21820					0.1194648851369493
LLHRPRRT	8	Unmodified	_LLHRPRRT_					0	0	0		ENST00000453256.5_1_7:55540449-55583655:-|nuORF;ENST00000428648.5_1_7:55540449-55639414:-|nuORF;ENST00000418904.5_1_7:55540449-55620397:-|nuORF	ENST00000453256.5_1_7:55540449-55583655:-|nuORF	ENST00000453256.5_1_7:55540449-55583655:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.8288452029228	2	524.827966	1047.64138	2.5784	0.0013532	-1.0448	-0.00054832	1.5337	0.00080491	524.8275227110491	83.791	1.0292	84.061	83.739	84.768	0.27029					94	32	5	0	0	0	0.89176	1	34948	34948		0.79363	0	1	209110000			18828	6430	9108	9147	21821	21821					0.1194648851369493
LLHTMEDEH	9	Unmodified	_LLHTMEDEH_					0	0	0			REV__ENST00000330205.10_1_21:47604309-47604375:-|nuORF	REV__ENST00000330205.10_1_21:47604309-47604375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	376.1910888552666	3	375.506213	1123.49681	-0.23513	-8.8292E-05	-2.1821	-0.00081938	-2.4172	-0.00090768	375.50534782629313	11.214	1.4295	11.975	11.453	12.883	0.76165					80	47	2	0	0	0	0.11891	1	4790	4790		2.9952	1.151	1	926770	+		18829	12442	9109	9148	21822	21822					-0.05999985539142472
LLHTYSSIL	9	Unmodified	_LLHTYSSIL_					0	0	0		ENSG00000134294|ENST00000256689|SLC38A2;nc|ENSG00000134294|Q96QD8-2|SLC38A2	ENSG00000134294|ENST00000256689|SLC38A2	ENSG00000134294|ENST00000256689|SLC38A2	MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7977783083916	2	523.797675	1045.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.463	1	57.878	57.378	58.378	1.4145								0	0	0	0.11829	1	23663	23663		32.117	1.8922	1				18830	2606	9110	9149	21823	21823					0.05982913620096042
LLHVKSVK	8	Unmodified	_LLHVKSVK_					0	0	0		ENST00000558711.1_2_15:33192152-33192383:-|nuORF;nc|ENSG00000248905|Q68DA7-5|FMN1;ENSG00000248905|ENST00000616417|FMN1	ENST00000558711.1_2_15:33192152-33192383:-|nuORF	ENST00000558711.1_2_15:33192152-33192383:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.3082153201103	2	462.30547	922.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.12	1	103.18	102.68	103.68	0.061172								0	0	0	1.0178	1	43219	43219		0.79363	0	1				18831	5371	9111	9150	21824	21824					0.13199244927807285
LLHVSLLSL	9	Unmodified	_LLHVSLLSL_					0	0	0			REV__ENST00000394906.6_1_17:27207287-27207452:-|nuORF	REV__ENST00000394906.6_1_17:27207287-27207452:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.3101684451103	2	497.81841	993.622267	2.8702	0.0014288	0.83421	0.00041529	3.7044	0.0018441	497.81845493625883	75.053	0.3402	76.359	76.214	76.555	1.3063					14	10	2	0	0	0	0.11645	1	31443	31443		8.5933	0	1	909290	+		18832	12832	9112	9151	21825	21825					0.12520094379431157
LLHWNKAR	8	Unmodified	_LLHWNKAR_					0	0	0			REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	REV__nc|ENSG00000171804|Q6ZQQ6|WDR87	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1400634646416	2	519.303793	1036.59303	2.1375	0.00111	0.19695	0.00010228	2.3344	0.0012123	519.3043792580424	54.865	0.22614	54.865	54.725	54.951	0					9	6	2	0	0	0	2.3239	1	22817	22817		0.69038	0	1	650390	+		18833	11044	9113	9152	21826	21826					0.07619994873789437
LLHWVLQPP	9	Unmodified	_LLHWVLQPP_					0	0	0			REV__ENST00000238714.7_1_2:60983626-60987372:+|nuORF	REV__ENST00000238714.7_1_2:60983626-60987372:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	552.2183715701103	2	551.824027	1101.6335	1.3256	0.00073152	0.82278	0.00045403	2.1484	0.0011856	551.8243752978726	66.583	0.61067	66.583	66.156	66.767	0					43	18	3	0	0	0	0.11787	1	27663	27663		5.2307	2.3415	1	1655800	+		18834	12119	9114	9153	21827	21827					0.08674916473546546
LLHWVLQPP	9	Unmodified	_LLHWVLQPP_					0	0	0			REV__ENST00000238714.7_1_2:60983626-60987372:+|nuORF	REV__ENST00000238714.7_1_2:60983626-60987372:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	551.824027	1101.6335	1.8985	0.0010477	1.3026	0.00071882	3.2012	0.0017665	551.8246597869588	66.056	0.66499	66.381	65.894	66.559	0.32449	0.055399	-0.0004899	NaN	5.2307	41	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1673600	+		18835	12119	9114	9153							0.08674916473546546
LLHYKLVRQMP	11	Unmodified	_LLHYKLVRQMP_					0	0	0			REV__VAV1-EXOC3|2|fusion	REV__VAV1-EXOC3|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6089660525322	3	466.607713	1396.80131	3.2842	0.0015324	0.49284	0.00022997	3.777	0.0017624	466.6077737302514	87.191	1.6586	87.434	87.17	88.829	0.24387					94	55	3	0	0	0	1.0395	1	36897	36897		0.45452	0	1	5112000	+		18836	9896	9115	9154	21828	21828					0.11878235675862925
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2590515017509	3	410.255223	1227.74384	0.71464	0.00029319	4.0457	0.0016598	4.7603	0.0019529	410.257314295176	47.038	0.28649	47.038	46.863	47.149	0					22	8	3	0	0	0	0.33499	1	19630	19630		29.291	9.3045	1	1543600			18837	179	9116	9155	21829	21829					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.8795654177666	2	614.879196	1227.74384	2.3574	0.0014495	-0.66085	-0.00040634	1.6965	0.0010432	614.87874960395	49.612	0.34336	49.612	49.38	49.723	0					27	10	3	0	0	0	0.026163	3	20698	20652;20698;20735		93.448	25.61	1	3031900			18838	179	9116	9155	21830;21831;21832	21831					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.8824951052666	2	614.879196	1227.74384	1.6519	0.0010157	0.51939	0.00031936	2.1713	0.0013351	614.8796788775452	46.502	0.19457	46.831	46.735	46.93	0.32899					9	6	2	0	0	0	0.62024	1	19519	19519		20.581	2.4346	1	366000			18839	179	9116	9155	21833	21833					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.8808471560478	2	614.879196	1227.74384	1.632	0.0010035	0.79982	0.00049179	2.4318	0.0014953	614.8798643838778	49.069	0.36396	49.399	49.194	49.558	0.33019					27	11	3	0	0	0	0.020781	3	20561	20514;20561;20608		98.73	21.905	1	2832500			18840	179	9116	9155	21834;21835;21836	21835					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.2563049197197	3	410.255223	1227.74384	1.919	0.00078729	1.4342	0.00058837	3.3532	0.0013757	410.2560473563773	49.036	0.65958	49.366	49.164	49.824	0.33019					53	21	4	0	0	0	0.028056	2	20570	20523;20570		68.436	31.47	1	12799000			18841	179	9116	9155	21837;21838	21838					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2564269900322	3	410.255223	1227.74384	2.001	0.00082094	0.43126	0.00017693	2.4323	0.00099786	410.25556453872537	47.713	0.91454	49.095	48.792	49.707	1.3825					77	28	5	0	0	0	0.030532	3	19913	19913;19961;20000		74.094	35.535	1	28721000			18842	179	9116	9155	21839;21840;21841	21839					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.8804809451103	2	614.879196	1227.74384	2.1025	0.0012928	-0.13541	-8.3262E-05	1.9671	0.0012096	614.8790673173658	47.654	0.43874	49.036	48.858	49.297	1.3825					38	13	4	0	0	0	0.0023541	2	19978	19926;19978		126.33	54.622	1	8943900			18843	179	9116	9155	21842;21843	21843					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.8804809451103	2	614.879196	1227.74384	1.9961	0.0012274	-0.27353	-0.00016819	1.7226	0.0010592	615.3800300806364	44.503	0.22528	46.463	46.319	46.544	1.9596					11	6	2	0	0	0	0.62024	1	18625	18625		20.581	2.4346	1	589000			18844	179	9116	9155	21844	21844					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2562438845634	3	410.255223	1227.74384	2.4074	0.00098765	0.21113	8.6617E-05	2.6185	0.0010743	410.25542531258736	47.165	0.77673	49.141	48.966	49.743	1.976					67	24	5	0	0	0	0.03922	3	19768	19720;19768;19807		59.496	26.879	1	29419000			18845	179	9116	9155	21845;21846;21847	21846					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.8801757693291	2	614.879196	1227.74384	2.3403	0.001439	0.033344	2.0502E-05	2.3737	0.0014595	614.8791152627268	47.166	0.40604	49.142	48.999	49.405	1.976					37	12	4	0	0	0	0.004821	2	19782	19735;19782		112.95	41.238	1	6876900			18846	179	9116	9155	21848;21849	21849					0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	614.879196	1227.74384	2.2819	0.0014031	0.37334	0.00022956	2.6552	0.0016326	614.8797966448094	47.006	0.19013	47.006	46.895	47.085	0	0.08751	-0.00011075	NaN	20.581	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	332430			18847	179	9116	9155							0.13907671951278644
LLIDDKGTIKL	11	Unmodified	_LLIDDKGTIKL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	614.879196	1227.74384	2.3494	0.0014446	0.79765	0.00049046	3.147	0.001935	614.8796631331234	45.037	0.19194	46.403	46.305	46.497	1.3653	-0.030041	0.00036697	NaN	20.581	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	580000			18848	179	9116	9155							0.13907671951278644
LLIDLRQPWSL	11	Unmodified	_LLIDLRQPWSL_					0	0	0			REV__ENST00000477274.1_1_X:153276255-153284091:-|nuORF	REV__ENST00000477274.1_1_X:153276255-153284091:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9350463747978	3	451.934484	1352.78162	2.2031	0.00099564	-2.633	-0.00119	-0.42998	-0.00019432	451.9339659476487	83.295	1.2912	83.295	82.585	83.876	0					71	41	3	0	0	0	1.0366	1	34774	34774		0.40827	0	1	1149800	+		18849	11416	9117	9156	21850	21850					0.1193418293673858
LLIEEHFD	8	Unmodified	_LLIEEHFD_					0	0	0			REV__ENST00000261880.9_1_15:67494367-67494466:-|nuORF	REV__ENST00000261880.9_1_15:67494367-67494466:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.1763488650322	3	339.17468	1014.50221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.68	1	102.74	102.24	103.24	0.062805								0	0	0	1.0178	1	43018	43018		0.45834	0.057624	1		+		18850	12188	9118	9157	21851	21851					-0.0044593868499305245
LLIEKYNEL	9	Unmodified	_LLIEKYNEL_					0	0	0			REV__tr|A0A553SM24|A0A553SM24_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_21765PE=3SV=1	REV__tr|A0A553SM24|A0A553SM24_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_21765PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8242065310478	2	567.823889	1133.63323	1.1223	0.00063728	-0.032998	-1.8737E-05	1.0893	0.00061855	567.8238666824739	56.01	0.33804	57.979	57.811	58.149	1.9684					30	10	4	0	0	0	0.098163	1	23507	23507		49.933	4.183	1	10427000	+		18851	15004	9119	9158	21852	21852					0.07175451963030355
LLIENVASL	9	Unmodified	_LLIENVASL_					0	0	0		ENST00000388829.3_1_X:13397321-13397372:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2924987673759	2	486.292225	970.569897	1.6044	0.0007802	-0.54309	-0.0002641	1.0613	0.00051611	486.2919664231079	70.702	0.80379	70.702	70.423	71.227	0					70	25	5	0	0	0	0.0066739	5	29398	29356;29398;29437;29476;29516		115.69	19.581	1	42011000			18852	5308	9120	9159	21853;21854;21855;21856;21857	21854					0.08343511245811897
LLIENVASL	9	Unmodified	_LLIENVASL_					0	0	0		ENST00000388829.3_1_X:13397321-13397372:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2919799685478	2	486.292225	970.569897	1.9855	0.00096551	-1.8883	-0.00091828	0.097134	4.7236E-05	486.2912737268346	70.193	0.82406	70.516	70.224	71.048	0.32223					68	26	4	0	0	0	0.026836	4	29382	29299;29341;29382;29433		92.491	17.709	1	48941000			18853	5308	9120	9159	21858;21859;21860;21861	21860					0.08343511245811897
LLIENVASL	9	Unmodified	_LLIENVASL_					0	0	0		ENST00000388829.3_1_X:13397321-13397372:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2935058474541	2	486.292225	970.569897	2.0336	0.00098893	0.86089	0.00041865	2.8945	0.0014076	486.29273007816954	69.121	1.1289	70.486	70.187	71.316	1.3657					81	36	5	0	0	0	0.01454	3	28977	28928;28977;29029		103.75	7.6374	1	132780000			18854	5308	9120	9159	21862;21863;21864	21863					0.08343511245811897
LLIENVASL	9	Unmodified	_LLIENVASL_					0	0	0		ENST00000388829.3_1_X:13397321-13397372:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5790283083916	1	971.577174	970.569897	1.6393	0.0015927	0.22398	0.00021761	1.8633	0.0018103	971.5773924745769	69.121	0.53832	70.486	70.22	70.758	1.3657					40	17	3	0	0	0	0.0066739	1	28992	28992		115.69	19.581	1	26375000			18855	5308	9120	9159	21865	21865					0.08343511245811897
LLIENVASL	9	Unmodified	_LLIENVASL_					0	0	0		ENST00000388829.3_1_X:13397321-13397372:-|nuORF;nc|ENSG00000233276|P07203-2|GPX1;ENST00000419783.1_2_3:49395567-49395990:-|nuORF;ENSG00000233276|ENST00000419783|GPX1	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	ENST00000388829.3_1_X:13397321-13397372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2934142947197	2	486.292225	970.569897	1.6634	0.00080889	0.60962	0.00029645	2.273	0.0011053	486.2925692337854	68.601	1.1108	70.454	70.12	71.23	1.853					87	35	4	0	0	0	0.026836	6	28780	28696;28741;28780;28832;28880;28932		92.491	13.427	1	136910000			18856	5308	9120	9159	21866;21867;21868;21869;21870;21871	21868					0.08343511245811897
LLIFEPRSF	9	Unmodified	_LLIFEPRSF_					0	0	0			REV__nc|ENSG00000170324|Q68DX3-3|FRMPD2	REV__nc|ENSG00000170324|Q68DX3-3|FRMPD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.8220703005791	2	561.321317	1120.62808	5.6836	0.0031903	0.40322	0.00022633	6.0868	0.0034167	561.3213372957961	88.36	0.12874	89.417	89.369	89.498	1.0562					5	3	2	0	0	0	0.11645	1	37264	37264		4.756	0	1	438480	+		18857	10981	9121	9160	21872	21872					0.07259192891092425
LLIFYYSF	8	Unmodified	_LLIFYYSF_					0	0	0		ENST00000551127.5_1_12:113726380-113729792:+|nuORF;ENST00000552077.5_1_12:113726380-113733878:+|nuORF;ENSG00000186815|ENST00000335509|TPCN1;nc|ENSG00000186815|Q9ULQ1-3|TPCN1	ENST00000551127.5_1_12:113726380-113729792:+|nuORF	ENST00000551127.5_1_12:113726380-113729792:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	532.7684203982353	2	533.286411	1064.55827	2.0281	0.0010815	-1.1108	-0.00059236	0.9173	0.00048918	533.2857405982548	65.464	0.91926	67.372	67.063	67.982	1.9085					64	29	3	0	0	0	2.3239	1	27351	27351		10.183	0	1	11921000			18858	4806	9122	9161	21873	21873					0.028573142224786352
LLIILFCLF	9	Unmodified	_LLIILFCLF_					0	0	0		ENST00000464456.5_2_3:168864564-168864609:-|nuORF	ENST00000464456.5_2_3:168864564-168864609:-|nuORF	ENST00000464456.5_2_3:168864564-168864609:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8366577029228	2	547.837757	1093.66096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.15	1	66.549	66.049	67.049	1.3989								0	0	0	0.089993	1	27322	27322		36.466	4.1607	1				18859	6693	9123	9162	21874	21874					0.1178768368956753
LLIIPPFV	8	Unmodified	_LLIIPPFV_					0	0	0		tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5369140505791	3	304.537002	910.589176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.498	1	25.498	24.998	25.998	0								0	0	0	1.0178	1	10642	10642		0.45834	0	1				18860	16173	9124	9163	21875	21875					0.13030512327384258
LLIKLRVPIA	10	Unmodified	_LLIKLRVPIA_					0	0	0			REV__ENSG00000169594|ENST00000345382|BNC1	REV__ENSG00000169594|ENST00000345382|BNC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	379.2702209353447	3	379.269027	1134.78525	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.72	1	112.77	112.27	113.27	0.04554								0	0	0	0.66254	1	48573	48573		0.15932	0	1		+		18861	10955	9125	9164	21876	21876					0.22324897501289342
LLIKNILLLV	10	Unmodified	_LLIKNILLLV_					0	0	0			REV__ENST00000428210.5_1_2:61719906-61720176:-|nuORF	REV__ENST00000428210.5_1_2:61719906-61720176:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.4114868044853	2	576.409935	1150.80532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.68	1	108.68	108.18	109.18	0								0	0	0	0.66237	1	46872	46872		0.45834	0	1		+		18862	13009	9126	9165	21877	21877					0.23594648441235222
LLIKNILLLV	10	Unmodified	_LLIKNILLLV_					0	0	0			REV__ENST00000428210.5_1_2:61719906-61720176:-|nuORF	REV__ENST00000428210.5_1_2:61719906-61720176:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.4116088747978	2	576.409935	1150.80532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.78	1	108.78	108.28	109.28	0								0	0	0	0.66237	1	46934	46934		0.45834	0	1		+		18863	13009	9126	9165	21878	21878					0.23594648441235222
LLIKQVVEV	9	Unmodified	_LLIKQVVEV_					0	0	0		nc|ENSG00000136144|Q8NDN9-2|RCBTB1;ENSG00000136144|ENST00000378302|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.8397094607353	2	520.839342	1039.66413	1.4246	0.00074201	1.856	0.00096669	3.2807	0.0017087	520.8395536906357	48.645	0.30679	50.033	49.864	50.17	1.388					15	9	2	0	0	0	0.098163	1	20383	20383		49.933	17.147	1	2033200			18864	2707	9127	9166	21879	21879					0.14588650067935305
LLIKQVVEV	9	Unmodified	_LLIKQVVEV_					0	0	0		nc|ENSG00000136144|Q8NDN9-2|RCBTB1;ENSG00000136144|ENST00000378302|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.8401367068291	2	520.839342	1039.66413	2.2731	0.0011839	0.74399	0.0003875	3.0171	0.0015714	520.8390714484542	48.091	0.27569	50.068	49.899	50.175	1.9772					13	8	2	0	0	0	0.086433	1	20162	20162		53.833	15.657	1	2002600			18865	2707	9127	9166	21880	21880					0.14588650067935305
LLIKQVVEV	9	Unmodified	_LLIKQVVEV_					0	0	0		nc|ENSG00000136144|Q8NDN9-2|RCBTB1;ENSG00000136144|ENST00000378302|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	520.839342	1039.66413	2.2511	0.0011725	0.56556	0.00029456	2.8166	0.001467	520.8398487173476	50.548	0.19061	50.548	50.437	50.628	0	0.30777	-0.0001545	NaN	53.833	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	551540			18866	2707	9127	9166							0.14588650067935305
LLIKQVVEV	9	Unmodified	_LLIKQVVEV_					0	0	0		nc|ENSG00000136144|Q8NDN9-2|RCBTB1;ENSG00000136144|ENST00000378302|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	nc|ENSG00000136144|Q8NDN9-2|RCBTB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	520.839342	1039.66413	1.8932	0.00098605	0.37055	0.000193	2.2637	0.001179	520.8397899394257	49.982	0.18882	50.312	50.232	50.421	0.33019	0.072113	-0.00035763	NaN	53.833	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	707630			18867	2707	9127	9166							0.14588650067935305
LLIKRGSR	8	Unmodified	_LLIKRGSR_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1;ENST00000469067.5_1_9:90113992-90265069:+|nuORF	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	315.0469543337822	3	314.878421	941.613434	0.15122	4.7616E-05	1.9332	0.00060872	2.0844	0.00065634	314.8789758526392	32.965	0.098667	34.789	34.738	34.837	1.8246					10	7	2	0	0	0	2.3239	1	13798	13798		1.6526	0	1	10041000			18868	4962	9128	9167	21881	21881					0.14029165533622745
LLIKRVVERHL	11	Unmodified	_LLIKRVVERHL_					0	0	0			REV__ETNK1-MYO9B|1|fusion	REV__ETNK1-MYO9B|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	344.8863098025322	4	344.727861	1374.88234	1.3512	0.00046578	4.043	0.0013937	5.3941	0.0018595	344.9802955533703	42.898	0.54728	43.219	43.093	43.641	0.32135					27	17	2	0	0	0	0.14606	1	17974	17974		1.2148	0	1	1013200	+		18869	8948	9129	9168	21882	21882					0.20989259710268016
LLIKSDTEF	9	Unmodified	_LLIKSDTEF_					0	0	0		tr|A0A7D6VR02|A0A7D6VR02_9CLOTD-alanine--D-alanineligaseOS=ClostridiumintestinaleOX=36845GN=ddlPE=3SV=1	tr|A0A7D6VR02|A0A7D6VR02_9CLOTD-alanine--D-alanineligaseOS=ClostridiumintestinaleOX=36845GN=ddlPE=3SV=1	tr|A0A7D6VR02|A0A7D6VR02_9CLOTD-alanine--D-alanineligaseOS=ClostridiumintestinaleOX=36845GN=ddlPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1916992068291	2	533.294965	1064.57538	2.4593	0.0013115	1.159	0.00061808	3.6183	0.0019296	533.2957375719584	72.089	1.1135	73.43	73.279	74.393	1.3415					48	35	3	0	0	0	0.11333	1	30379	30379		13.508	2.3934	1	1992800			18870	16815	9130	9169	21883	21883					0.04567190037619184
LLILLKAVKKT	11	Unmodified	_LLILLKAVKKT_					0	0	0		ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4373657107353	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.23	1	104.23	103.73	104.73	0								0	0	0	0.63775	1	43947	43947		0.26902	0.26902	1				18871	6990	9131	9170	21884	21884					0.25910008878304325
LLILLKAVKKT	11	Unmodified	_LLILLKAVKKT_					0	0	0		ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	ENST00000503752.5_1_4:185578328-185580527:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4391967654228	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.34	1	104.34	103.84	104.84	0								0	0	0	0.63775	1	44011	44011		0.26902	0.26902	1				18872	6990	9131	9170	21885	21885					0.25910008878304325
LLINITNIWIP	11	Unmodified	_LLINITNIWIP_					0	0	0		tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2681762576103	3	437.267463	1308.78056	1.972	0.00086227	-0.58053	-0.00025384	1.3914	0.00060843	437.2671874727188	37.828	0.30166	38.133	37.938	38.24	0.30497					17	11	2	0	0	0	1.0357	1	15873	15873		1.4551	0.24029	1	1936500			18873	17221	9132	9171	21886	21886					0.13851968567837503
LLINITNIWIP	11	Unmodified	_LLINITNIWIP_					0	0	0		tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2679321169853	3	437.267463	1308.78056	2.038	0.00089113	1.2624	0.00055199	3.3003	0.0014431	437.26777768687555	39.19	0.81233	39.499	38.919	39.731	0.30857					68	26	3	0	0	0	1.0365	1	16282	16282		1.2148	0.20126	1	2674100			18874	17221	9132	9171	21887	21887					0.13851968567837503
LLINITNIWIP	11	Unmodified	_LLINITNIWIP_					0	0	0		tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2691833376884	3	437.267463	1308.78056	2.1706	0.00094913	1.4318	0.0006261	3.6024	0.0015752	437.2679028949031	41.57	0.66568	41.887	41.371	42.037	0.31683					36	22	2	0	0	0	1.0365	1	17481	17481		1.2148	0	1	696990			18875	17221	9132	9171	21888	21888					0.13851968567837503
LLINITNIWIP	11	Unmodified	_LLINITNIWIP_					0	0	0		tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	tr|A0A7D7A0A1|A0A7D7A0A1_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2694885134697	3	437.267463	1308.78056	1.4859	0.00064975	1.0786	0.00047163	2.5645	0.0011214	437.2677832781995	39.092	0.51122	40.928	40.525	41.037	1.8366					24	15	2	0	0	0	1.0357	2	16318	16318;16398		1.4551	0.67859	1	1262200			18876	17221	9132	9171	21889;21890	21889					0.13851968567837503
LLINLIRLPK	10	Unmodified	_LLINLIRLPK_					0	0	0			REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2768432497978	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.192	1	84.192	83.692	84.692	0								0	0	0	0.66254	1	35086	35086		0.15932	0	1		+		18877	9596	9133	9172	21891	21891					0.2184828252995885
LLINLIRLPK	10	Unmodified	_LLINLIRLPK_					0	0	0			REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2768737673759	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.815	1	84.815	84.315	85.315	0								0	0	0	0.66255	1	35342	35342		0.13989	0	1		+		18878	9596	9133	9172	21892	21892					0.2184828252995885
LLINLIRLPK	10	Unmodified	_LLINLIRLPK_					0	0	0			REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2770263552666	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.897	1	84.158	83.658	84.658	0.26083								0	0	0	0.66254	1	35092	35092		0.15932	0	1		+		18879	9596	9133	9172	21893	21893					0.2184828252995885
LLINLIRLPK	10	Unmodified	_LLINLIRLPK_					0	0	0			REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2763549685478	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.153	1	84.414	83.914	84.914	0.26083								0	0	0	0.66255	1	35198	35198		0.13989	0	1		+		18880	9596	9133	9172	21894	21894					0.2184828252995885
LLIPFLRIH	9	Unmodified	_LLIPFLRIH_					0	0	0			REV__ENST00000393409.2_1_3:126755887-126756190:+|nuORF	REV__ENST00000393409.2_1_3:126755887-126756190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5781432986259	3	374.577972	1120.71209	-0.21915	-8.209E-05	1.0326	0.00038678	0.81343	0.00030469	374.5783428423551	31.629	0.45456	32.911	32.655	33.11	1.2813					40	14	3	0	0	0	0.82114	1	13235	13235		2.4985	1.427	1	5721400	+		18881	12810	9134	9173	21895	21895					0.15655768778628953
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	868.5514404177666	1	868.550231	867.542954	1.6857	0.0014641	-0.064685	-5.6182E-05	1.621	0.001408	868.5502453064723	72.761	0.4401	72.761	72.524	72.964	0					30	13	3	0	0	0	0.0068741	3	30296	30252;30296;30337		114.94	40.547	1	3484500			18882	2258	9135	9174	21896;21897;21898	21897					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.7805358767509	2	434.778754	867.542954	1.1824	0.00051407	2.189	0.00095174	3.3714	0.0014658	434.77987762298466	72.795	0.34644	72.795	72.557	72.903	0					20	10	2	0	0	0	0.13437	1	30319	30319		40.449	2.2974	1	1374000			18883	2258	9135	9174	21899	21899					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7816039919853	2	434.778754	867.542954	2.308	0.0010035	3.0061	0.001307	5.3141	0.0023104	434.7801269614567	72.302	0.34716	72.627	72.42	72.767	0.32494					17	10	2	0	0	0	0.04206	1	30241	30241		74.396	23.541	1	1924100			18884	2258	9135	9174	21900	21900					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5522949099541	1	868.550231	867.542954	1.9358	0.0016813	0.5781	0.00050211	2.5139	0.0021834	868.5510949873415	72.209	0.4742	72.534	72.323	72.797	0.32494					33	14	3	0	0	0	0.052478	1	30280	30280		67.035	16.18	1	3199100			18885	2258	9135	9174	21901	21901					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	868.5499755740166	1	868.550231	867.542954	2.4724	0.0021474	-1.2371	-0.0010745	1.2353	0.001073	868.549071842535	71.064	0.47916	72.405	72.179	72.658	1.3415					39	15	3	0	0	0	0.0024698	3	29814	29768;29814;29865		129.2	35.317	1	18723000			18886	2258	9135	9174	21902;21903;21904	21903					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7801086306572	2	434.778754	867.542954	2.754	0.0011974	1.617	0.00070304	4.371	0.0019004	434.7794515179959	71.064	0.45215	72.405	72.148	72.601	1.3415					34	14	3	0	0	0	0.04206	2	29826	29826;29883		74.396	23.541	1	9212000			18887	2258	9135	9174	21905;21906	21905					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	868.5490600466728	1	868.550231	867.542954	1.1815	0.0010262	-0.61098	-0.00053067	0.57055	0.00049555	868.5493534606308	70.619	0.48532	72.457	72.167	72.653	1.8378					37	15	3	0	0	0	0.0024698	3	29588	29541;29588;29640		129.2	35.317	1	9713400			18888	2258	9135	9174	21907;21908;21909	21908					0.10388447425282266
LLIPGLATA	9	Unmodified	_LLIPGLATA_					0	0	0		ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	ENSG00000125356|ENST00000371437|NDUFA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7792541384697	2	434.778754	867.542954	1.3524	0.00058801	1.277	0.0005552	2.6294	0.0011432	434.77935810804814	70.587	0.48532	72.425	72.167	72.653	1.8378					35	15	3	0	0	0	0.052478	1	29615	29615		67.035	26.587	1	8661700			18889	2258	9135	9174	21910	21910					0.10388447425282266
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.5784789919853	3	374.577972	1120.71209	-0.85614	-0.00032069	2.6012	0.00097434	1.745	0.00065364	374.57901940600834	33.116	0.41976	33.116	32.877	33.296	0					39	14	3	0	0	0	0.82114	1	13898	13898		2.4985	0	1	6185800	+		18890	10861	9136	9175	21911	21911					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5788452029228	3	374.577972	1120.71209	1.1153	0.00041776	1.3085	0.00049015	2.4238	0.00090791	374.57836312752977	32.342	0.43455	32.636	32.371	32.805	0.29431					42	13	4	0	0	0	0.82114	1	13576	13576		2.4985	0	1	5526900	+		18891	10861	9136	9175	21912	21912					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5781432986259	3	374.577972	1120.71209	1.1355	0.00042534	-0.013612	-5.0989E-06	1.1219	0.00042024	374.57800386022615	32.702	0.45256	32.996	32.774	33.227	0.29431					40	15	4	0	0	0	0.8462	1	13681	13681		1.0715	0	1	5433800	+		18892	10861	9136	9175	21913	21913					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5789672732353	3	374.577972	1120.71209	-0.1748	-6.5476E-05	2.2265	0.00083399	2.0517	0.00076851	374.5787465343838	31.197	0.50398	32.478	32.151	32.655	1.2813					47	15	4	0	0	0	0.81521	2	13080	13080;13125		2.7352	1.5419	1	4726500	+		18893	10861	9136	9175	21914;21915	21914					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5785705447197	3	374.577972	1120.71209	-0.21915	-8.209E-05	1.0326	0.00038678	0.81343	0.00030469	374.5783428423551	31.629	0.45456	32.911	32.655	33.11	1.2813					40	14	3	0	0	0	0.84531	2	13338	13285;13338		1.1933	0	1	5721400	+		18894	10861	9136	9175	21916;21917	21917					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.5781432986259	3	374.577972	1120.71209	0.53728	0.00020125	1.5171	0.00056828	2.0544	0.00076953	374.5783959373905	30.531	0.46067	32.346	32.108	32.568	1.8151					46	14	4	0	0	0	0.81521	2	12853	12800;12853		2.7352	1.5419	1	4262900	+		18895	10861	9136	9175	21918;21919	21919					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.5782958865166	3	374.577972	1120.71209	0.55408	0.00020755	0.27932	0.00010463	0.8334	0.00031217	374.57813497873155	30.985	0.43801	32.8	32.568	33.006	1.8151					42	14	4	0	0	0	0.81521	2	12983	12936;12983		2.7352	2.7352	1	5054800	+		18896	10861	9136	9175	21920;21921	21921					0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	374.577972	1120.71209	-0.85614	-0.00032069	2.6012	0.00097434	1.745	0.00065364	374.57901940600834	33.116	0.41976	33.116	32.877	33.296	0	0.15998	0.0020089	NaN	2.7352	39	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6185800	+		18897	10861	9136	9175							0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	374.577972	1120.71209	1.1153	0.00041776	1.3085	0.00049015	2.4238	0.00090791	374.57836312752977	32.342	0.43455	32.636	32.371	32.805	0.29431	0.14955	-0.00039018	NaN	2.7352	42	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5526900	+		18898	10861	9136	9175							0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	374.577972	1120.71209	-0.21915	-8.209E-05	1.0326	0.00038678	0.81343	0.00030469	374.5783428423551	31.629	0.45456	32.911	32.655	33.11	1.2813	-0.044908	0.00024629	NaN	2.7352	40	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5721400	+		18899	10861	9136	9175							0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	374.577972	1120.71209	-0.1748	-6.5476E-05	2.2265	0.00083399	2.0517	0.00076851	374.5787465343838	31.197	0.50398	32.478	32.151	32.655	1.2813	-0.0086391	0.00064132	NaN	2.7352	47	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4726500	+		18900	10861	9136	9175							0.15655768778628953
LLIPLRHLF	9	Unmodified	_LLIPLRHLF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	374.577972	1120.71209	0.53728	0.00020125	1.5171	0.00056828	2.0544	0.00076953	374.5783959373905	30.531	0.46067	32.346	32.108	32.568	1.8151	-0.14091	-0.0001558	NaN	2.7352	46	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4262900	+		18901	10861	9136	9175							0.15655768778628953
LLIQGRDFL	9	Unmodified	_LLIQGRDFL_					0	0	0		ENSG00000206043|ENST00000579455|C18orf63	ENSG00000206043|ENST00000579455|C18orf63	ENSG00000206043|ENST00000579455|C18orf63	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8204833865166	2	537.818941	1073.62333	1.338	0.00071961	1.3508	0.0007265	2.6888	0.0014461	537.8193248045367	52.458	0.38108	54.43	54.228	54.61	1.9722					27	11	3	0	0	0	0.04812	1	21986	21986		69.105	5.1444	1	4152800			18902	5193	9137	9176	21922	21922					0.08946308748318188
LLISGLSLIL	10	Unmodified	_LLISGLSLIL_					0	0	0			REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3511230349541	2	521.349543	1040.68453	2.8307	0.0014758	0.16328	8.5128E-05	2.994	0.0015609	521.3494422344721	79.76	0.34038	81.011	80.8	81.14	1.2512					22	10	3	0	0	0	0.051733	2	33456	33456;33507		78.149	8.7458	1	1510300	+		18903	15280	9138	9177	21923;21924	21923					0.16581820727765262
LLISGLSLIL	10	Unmodified	_LLISGLSLIL_					0	0	0			REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	521.349543	1040.68453	2.1348	0.001113	1.1486	0.00059882	3.2834	0.0017118	521.3500681787029	80.804	0.28022	81.095	80.933	81.213	0.29056	-0.026982	0.00060624	NaN	78.149	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807570	+		18904	15280	9138	9177							0.16581820727765262
LLISGLSLIL	10	Unmodified	_LLISGLSLIL_					0	0	0			REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	REV__tr|A0A553SU73|A0A553SU73_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06430PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	521.349543	1040.68453	2.8307	0.0014758	0.16328	8.5128E-05	2.994	0.0015609	521.3494422344721	79.76	0.34038	81.011	80.8	81.14	1.2512	-0.11063	-0.00042115	NaN	78.149	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1510300	+		18905	15280	9138	9177							0.16581820727765262
LLISHLLV	8	Unmodified	_LLISHLLV_					0	0	0			REV__tr|A0A553SS46|A0A553SS46_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_02325PE=3SV=1	REV__tr|A0A553SS46|A0A553SS46_NIACIZn-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_02325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.3028442263603	2	454.302396	906.590239	2.0145	0.00091517	1.0499	0.00047699	3.0644	0.0013922	454.3027369280787	48.077	0.31737	48.077	47.905	48.222	0					20	9	3	0	0	0	0.76103	1	20067	20067		24.674	2.9272	1	750500	+		18906	15194	9139	9178	21925	21925					0.13320726696292695
LLIVKLWK	8	Unmodified	_LLIVKLWK_					0	0	0			REV__ENST00000493087.5_1_12:32755237-32793464:+|nuORF	REV__ENST00000493087.5_1_12:32755237-32793464:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	337.9023315310478	3	338.235434	1011.68447	1.2017	0.00040644	2.0395	0.00068985	3.2412	0.0010963	338.2361552900562	52.527	0.27002	52.853	52.683	52.953	0.32553					11	8	2	0	0	0	2.3239	1	22035	22035		1.8442	0	1	1352000	+		18907	10092	9140	9179	21926	21926					0.17909865518424795
LLIVKLWK	8	Unmodified	_LLIVKLWK_					0	0	0			REV__ENST00000493087.5_1_12:32755237-32793464:+|nuORF	REV__ENST00000493087.5_1_12:32755237-32793464:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9016906619072	3	338.235434	1011.68447	2.139	0.0007235	2.4124	0.00081596	4.5514	0.0015395	338.2362404833941	59.302	0.36724	61.271	61.067	61.435	1.969					17	11	2	0	0	0	2.3239	1	24904	24904		1.8442	0	1	568050	+		18908	10092	9140	9179	21927	21927					0.17909865518424795
LLIWKLLITIH	11	Unmodified	_LLIWKLLITIH_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.2118408083916	4	341.477246	1361.87988	0.48668	0.00016619	1.2414	0.00042392	1.7281	0.00059011	341.7284661507187	26.782	0.68039	27.043	26.896	27.576	0.26173					37	21	2	0	0	0	0.14606	1	11306	11306		0.094841	0	1	1122600			18909	5413	9141	9180	21928	21928					0.2134141125259248
LLIWKLLITIH	11	Unmodified	_LLIWKLLITIH_					0	0	0		nc|ENSG00000259207|P05106-2|ITGB3;nc|ENSG00000259207|P05106-3|ITGB3;ENSG00000259207|ENST00000559488|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	nc|ENSG00000259207|P05106-2|ITGB3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	341.477246	1361.87988	-0.01256	-4.2889E-06	2.6286	0.0008976	2.616	0.00089331	341.7291158947045	26.087	0.18853	27.347	27.265	27.454	1.2594	0.15167	0.0016268	NaN	0.094841	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481240			18910	5413	9141	9180							0.2134141125259248
LLIYPWTL	8	Unmodified	_LLIYPWTL_					0	0	0			REV__ENSG00000175548|ENST00000308742|ALG10B	REV__ENSG00000175548|ENST00000308742|ALG10B	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8047363162041	2	509.802229	1017.5899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.799	1	66.799	66.299	67.299	0								0	0	0	1.0178	1	27822	27822		2.5775	0	1		+		18911	10093	9142	9181	21929	21929					0.08181306976428004
LLIYRQYF	8	Unmodified	_LLIYRQYF_					0	0	0			REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3187133669853	2	558.316035	1114.61752	1.257	0.00070182	4.0815	0.0022788	5.3386	0.0029806	558.3187712892544	52.269	0.15239	54.241	54.2	54.352	1.9722					8	4	2	0	0	0	0.66111	1	21927	21927		34.187	1.4016	1	1157900	+		18912	14175	9143	9182	21930	21930					0.06479210236648214
LLKAKFRA	8	Unmodified	_LLKAKFRA_					0	0	0		ENST00000320248.3_1_8:1954634-1955009:+|nuORF	ENST00000320248.3_1_8:1954634-1955009:+|nuORF	ENST00000320248.3_1_8:1954634-1955009:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.2122070193291	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.127	1	84.765	84.265	85.265	1.6379								0	0	0	1.0178	1	34870	34870		0.40072	0	1				18913	5843	9144	9183	21931	21931					0.1373895116469157
LLKDHKII	8	Unmodified	_LLKDHKII_					0	0	0		tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.2160217165947	3	327.21481	978.622602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.67	1	103.73	103.23	104.23	0.059502								0	0	0	1.0178	1	43543	43543		1.8442	0	1				18914	16752	9145	9184	21932	21932					0.13243514099281128
LLKDHKII	8	Unmodified	_LLKDHKII_					0	0	0		tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.2164794802666	3	327.21481	978.622602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.64	1	103.8	103.3	104.3	0.16055								0	0	0	1.0178	1	43733	43733		1.8442	0	1				18915	16752	9145	9184	21933	21933					0.13243514099281128
LLKDHKII	8	Unmodified	_LLKDHKII_					0	0	0		tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	tr|A0A7D6VP20|A0A7D6VP20_9CLOTS-adenosylmethioninedecarboxylaseproenzymeOS=ClostridiumintestinaleOX=36845GN=speHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	327.2166015505791	3	327.21481	978.622602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.6	1	103.78	103.28	104.28	0.1731								0	0	0	1.0178	1	43660	43660		1.8442	0	1				18916	16752	9145	9184	21934	21934					0.13243514099281128
LLKERQRRP	9	Unmodified	_LLKERQRRP_					0	0	0		ENST00000359039.4_1_9:21335108-21335171:-|nuORF	ENST00000359039.4_1_9:21335108-21335171:-|nuORF	ENST00000359039.4_1_9:21335108-21335171:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2488281130791	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.024	1	29.024	28.524	29.524	0								0	0	0	0.42693	1	12148	12148		0.26902	0	1				18917	6018	9146	9185	21935	21935					0.14134698402403956
LLKFQQWREKF	11	Unmodified	_LLKFQQWREKF_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.6245910525322	3	508.289149	1521.84562	2.0367	0.0010352	0.38991	0.00019819	2.4266	0.0012334	508.28937816721225	43.137	2.5523	43.137	42.634	45.187	0					227	81	5	0	0	0	1.0402	2	18456	18456;18765		0.073264	0	1	23254000			18918	489	9147	9186	21936;21937	21936					0.10556963093654304
LLKFQQWREKF	11	Unmodified	_LLKFQQWREKF_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2905151247978	3	508.289149	1521.84562	2.6823	0.0013634	-1.0406	-0.00052895	1.6417	0.00083444	508.2886821522149	40.527	0.74159	41.837	41.453	42.195	1.3102					75	23	5	0	0	0	1.0365	2	17024	16887;17024		1.2148	0.41111	1	16690000			18919	489	9147	9186	21938;21939	21939					0.10556963093654304
LLKIFLVKR	9	Unmodified	_LLKIFLVKR_					0	0	0			REV__ENST00000587992.1_1_19:10445108-10445636:-|nuORF	REV__ENST00000587992.1_1_19:10445108-10445636:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1129.781420886517	1	1129.78196	1128.77469	1.3526	0.0015281	-1.6157	-0.0018254	-0.26307	-0.00029722	1129.7797602673759	104.95	0.22546	104.95	104.86	105.09	0					21	11	2	0	0	0	0.85403	1	44433	44433		0	0	1	33044000	+		18920	14040	9148	9187	21940	21940					0.21544914846822394
LLKIFLVKR	9	Unmodified	_LLKIFLVKR_					0	0	0			REV__ENST00000587992.1_1_19:10445108-10445636:-|nuORF	REV__ENST00000587992.1_1_19:10445108-10445636:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1129.780566394329	1	1129.78196	1128.77469	1.3528	0.0015284	-1.6163	-0.0018261	-0.26352	-0.00029772	1129.7797997470113	105.38	0.68127	105.38	105.27	105.95	0					99	34	3	0	0	0	0.85403	4	44674	44674;44757;44848;44957		0	0	1	56256000	+		18921	14040	9148	9187	21941;21942;21943;21944	21941					0.21544914846822394
LLKIKHGDL	9	Unmodified	_LLKIKHGDL_					0	0	0		ENST00000570300.1_1_17:79575918-79596804:-|nuORF;NPLOC4-PLCE1|1|fusion;ENSG00000182446|ENST00000331134|NPLOC4;nc|ENSG00000182446|Q8TAT6-2|NPLOC4	ENST00000570300.1_1_17:79575918-79596804:-|nuORF	ENST00000570300.1_1_17:79575918-79596804:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2232849001884	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.572	1	81.852	81.352	82.352	0.2802								0	0	0	0.42693	1	34106	34106		0.26902	0	1				18922	4616	9149	9188	21945	21945					0.12766899127996112
LLKIVTKILKV	11	Unmodified	_LLKIVTKILKV_					0	0	0		ENST00000539644.5_1_12:124499189-124499246:+|nuORF	ENST00000539644.5_1_12:124499189-124499246:+|nuORF	ENST00000539644.5_1_12:124499189-124499246:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	423.3103820681572	3	423.30737	1266.90028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106	1	106.16	105.66	106.66	0.16174								0	0	0	0.63775	1	45225	45225		0.094841	0.094841	1				18923	7210	9150	9189	21946	21946					0.2775058191239168
LLKIVTKILKV	11	Unmodified	_LLKIVTKILKV_					0	0	0		ENST00000539644.5_1_12:124499189-124499246:+|nuORF	ENST00000539644.5_1_12:124499189-124499246:+|nuORF	ENST00000539644.5_1_12:124499189-124499246:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	423.3103820681572	3	423.30737	1266.90028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.11	1	106.27	105.77	106.77	0.16174								0	0	0	0.63775	1	45302	45302		0.094841	0.094841	1				18924	7210	9150	9189	21947	21947					0.2775058191239168
LLKKKLLHV	9	Unmodified	_LLKKKLLHV_					0	0	0			REV__ENSG00000255398|ENST00000528880|HCAR3	REV__ENSG00000255398|ENST00000528880|HCAR3	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3854247927666	2	546.386794	1090.75904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.554	1	85.554	85.054	86.054	0								0	0	0	0.42693	1	35646	35646		2.3027	0	1		+		18925	11972	9151	9190	21948	21948					0.2172862832978808
LLKKKMKKL	9	Unmodified	_LLKKKMKKL_					0	0	0			REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682983279228	3	377.266629	1128.77806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.33	1	110.38	109.88	110.88	0.048843								0	0	0	0.42693	1	47602	47602		0	0	1		+		18926	8227	9152	9191	21949	21949					0.21881841629192422
LLKKKMKKL	9	Unmodified	_LLKKKMKKL_					0	0	0			REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2677184939384	3	377.266629	1128.77806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.52	1	110.57	110.07	111.07	0.047043								0	0	0	0.42693	1	47672	47672		0	0	1		+		18927	8227	9152	9191	21950	21950					0.21881841629192422
LLKKKMKKL	9	Unmodified	_LLKKKMKKL_					0	0	0			REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2670165896416	3	377.266629	1128.77806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.67	1	110.83	110.33	111.33	0.16133								0	0	0	0.42693	1	48054	48054		0	0	1		+		18928	8227	9152	9191	21951	21951					0.21881841629192422
LLKKKMKKL	9	Unmodified	_LLKKKMKKL_					0	0	0			REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679015994072	3	377.266629	1128.77806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.76	1	110.92	110.42	111.42	0.16133								0	0	0	0.42693	1	48091	48091		0	0	1		+		18929	8227	9152	9191	21952	21952					0.21881841629192422
LLKKKMKKL	9	Unmodified	_LLKKKMKKL_					0	0	0			REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	REV__chr1:62437400-62439989|103|10.57|0.18|5.85|+|0|USP1,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685424685478	3	377.266629	1128.77806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9257	1	8.6565	8.1565	9.1565	0.73074								0	0	0	0.42693	1	3292	3292		0.26902	0	1		+		18930	8227	9152	9191	21953	21953					0.21881841629192422
LLKKKPPQQ	9	Unmodified	_LLKKKPPQQ_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3512451052666	2	540.350409	1078.68626	2.7052	0.0014617	-3.3367	-0.001803	-0.63154	-0.00034125	540.348566859883	93.813	0.34954	93.958	93.751	94.101	0.14493					23	10	3	0	0	0	0.85019	1	39289	39289		0.52476	0.52476	1	1504300			18931	2533	9153	9192	21954	21954					0.15006874536356918
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9221069216728	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.97	1	102.97	102.47	103.47	0								0	0	0	0.66264	1	43166	43166		0	0	1				18932	1737	9154	9193	21955	21955					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9286987185478	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.06	1	103.06	102.56	103.56	0								0	0	0	0.66264	1	43212	43212		0	0	1				18933	1737	9154	9193	21956	21956					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9305297732353	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.17	1	103.17	102.67	103.67	0								0	0	0	0.66264	1	43265	43265		0	0	1				18934	1737	9154	9193	21957	21957					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9287597537041	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.27	1	103.27	102.77	103.77	0								0	0	0	0.66264	1	43317	43317		0	0	1				18935	1737	9154	9193	21958	21958					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9304687380791	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.38	1	103.38	102.88	103.88	0								0	0	0	0.66264	1	43380	43380		0	0	1				18936	1737	9154	9193	21959	21959					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9297973513603	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.48	102.98	103.98	0								0	0	0	0.66264	1	43443	43443		0	0	1				18937	1737	9154	9193	21960	21960					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9296752810478	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.57	1	103.57	103.07	104.07	0								0	0	0	0.66264	1	43507	43507		0	0	1				18938	1737	9154	9193	21961	21961					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9301025271416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.24	1	105.24	104.74	105.74	0								0	0	0	0.66264	1	44625	44625		0	0	1				18939	1737	9154	9193	21962	21962					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9293090701103	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.35	104.85	105.85	0								0	0	0	0.66264	1	44692	44692		0	0	1				18940	1737	9154	9193	21963	21963					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9300414919853	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.44	1	105.44	104.94	105.94	0								0	0	0	0.66264	1	44755	44755		0	0	1				18941	1737	9154	9193	21964	21964					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9302856326103	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.54	1	105.54	105.04	106.04	0								0	0	0	0.66264	1	44820	44820		0	0	1				18942	1737	9154	9193	21965	21965					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9312011599541	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.64	1	105.64	105.14	106.14	0								0	0	0	0.66264	1	44885	44885		0	0	1				18943	1737	9154	9193	21966	21966					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9302245974541	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.74	1	105.74	105.24	106.24	0								0	0	0	0.66264	1	44952	44952		0	0	1				18944	1737	9154	9193	21967	21967					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9303466677666	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.1	1	106.1	105.6	106.6	0								0	0	0	0.66264	1	45192	45192		0	0	1				18945	1737	9154	9193	21968	21968					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9301025271416	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.25	1	106.25	105.75	106.75	0								0	0	0	0.66264	1	45296	45296		0	0	1				18946	1737	9154	9193	21969	21969					0.2658915942670319
LLKKLKKGKI	10	Unmodified	_LLKKLKKGKI_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;nc|ENSG00000111364|Q8NHQ9-2|DDX55	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.9298583865166	2	584.928826	1167.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.36	1	106.36	105.86	106.86	0								0	0	0	0.66264	1	45371	45371		0	0	1				18947	1737	9154	9193	21970	21970					0.2658915942670319
LLKKRLILLWI	11	Unmodified	_LLKKRLILLWI_					0	0	0		ENST00000358025.7_1_14:64483293-64484313:+|nuORF	ENST00000358025.7_1_14:64483293-64484313:+|nuORF	ENST00000358025.7_1_14:64483293-64484313:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	704.9921142458916	2	704.991958	1407.96936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.126	1	96.528	96.028	97.028	0.40208								0	0	0	0.63775	1	40438	40438		0	0	1				18948	6005	9155	9194	21971	21971					0.2816966593197776
LLKKYIEA	8	Unmodified	_LLKKYIEA_					0	0	0		nc|ENSG00000164935|Q9H295-2|DCSTAMP;ENSG00000164935|ENST00000297581|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	nc|ENSG00000164935|Q9H295-2|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.3053771853447	2	489.305136	976.595718	1.1037	0.00054005	-1.1352	-0.00055548	-0.031534	-1.543E-05	489.30440953209944	107.69	0.14711	107.69	107.62	107.77	0					19	7	3	0	0	0	0.89178	1	46232	46232		0.69038	0	1	40923000			18949	3805	9156	9195	21972	21972					0.10648405488075241
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2340881228447	4	337.981424	1347.89659	0.45602	0.00015413	3.274	0.0011066	3.73	0.0012607	338.23351048472523	27.139	1.283	27.401	26.744	28.027	0.26173					108	41	4	0	0	0	1.0402	2	11355	11355;11433		0.073264	0	1	2914800			18950	5695	9157	9196	21973;21974	21973					0.2365591213854259
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9824096560478	4	337.981424	1347.89659	0.14538	4.9135E-05	2.1044	0.00071126	2.2498	0.0007604	337.9821577808348	24.478	0.93239	25.719	25.455	26.387	1.241					57	30	3	0	0	0	1.0391	1	10228	10228		0.40827	0	1	2414100			18951	5695	9157	9196	21975	21975					0.2365591213854259
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9822265505791	4	337.981424	1347.89659	0.022361	7.5576E-06	2.4025	0.000812	2.4249	0.00081956	337.9821837545734	25.871	1.2357	27.13	26.405	27.641	1.2594					96	39	3	0	0	0	1.0402	2	10825	10825;10881		0.094841	0	1	3806900			18952	5695	9157	9196	21976;21977	21976					0.2365591213854259
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9820434451103	4	337.981424	1347.89659	-0.13485	-4.5577E-05	3.1365	0.0010601	3.0016	0.0010145	337.98221805993785	27.271	0.41741	28.542	28.295	28.712	1.2715					20	13	2	0	0	0	1.0402	1	11461	11461		0.094841	0	1	1604000			18953	5695	9157	9196	21978	21978					0.2365591213854259
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9824706912041	4	337.981424	1347.89659	0.066085	2.2335E-05	1.9273	0.00065138	1.9934	0.00067372	337.9821271209151	24.04	0.64653	25.724	25.443	26.089	1.6845					63	20	4	0	0	0	1.0402	1	10103	10103		0.094841	0	1	1359000			18954	5695	9157	9196	21979	21979					0.2365591213854259
LLKLILKKHKD	11	Unmodified	_LLKLILKKHKD_					0	0	0		ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	ENST00000280557.10_1_12:123252139-123253391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9824096560478	4	337.981424	1347.89659	0.11537	3.8992E-05	2.518	0.00085103	2.6333	0.00089002	337.98209974058784	25.471	1.0381	27.188	26.514	27.552	1.7167					86	33	4	0	0	0	1.0402	1	10712	10712		0.073264	0	1	4738500			18955	5695	9157	9196	21980	21980					0.2365591213854259
LLKLKHER	8	Unmodified	_LLKLKHER_					0	0	0		ENST00000541225.5_1_17:66883094-66937097:-|nuORF;nc|ENSG00000141338|O94911-1|ABCA8;ENSG00000141338|ENST00000586539|ABCA8;ENST00000590359.1_1_17:66890978-66899548:-|nuORF	ENST00000541225.5_1_17:66883094-66937097:-|nuORF	ENST00000541225.5_1_17:66883094-66937097:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2229186892509	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.615	1	62.615	62.115	63.115	0								0	0	0	1.0178	1	26106	26106		0.45834	0	1				18956	2953	9158	9197	21981	21981					0.13889721222108165
LLKLLKRKALR	11	Unmodified	_LLKLLKRKALR_					0	0	0			REV__ENST00000545279.5_1_5:135468581-135489282:+|nuORF	REV__ENST00000545279.5_1_5:135468581-135489282:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.3276550173759	3	451.325646	1350.95511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.917	1	35.74	35.24	36.24	1.8227								0	0	0	0.63775	1	14224	14224		0.50596	0.50596	1		+		18957	13800	9159	9198	21982	21982					0.2936701350367912
LLKLLKRKALR	11	Unmodified	_LLKLLKRKALR_					0	0	0			REV__ENST00000545279.5_1_5:135468581-135489282:+|nuORF	REV__ENST00000545279.5_1_5:135468581-135489282:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.3279601931572	3	451.325646	1350.95511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.007	1	35.83	35.33	36.33	1.8227								0	0	0	0.63775	1	14262	14262		0.50596	0.50596	1		+		18958	13800	9159	9198	21983	21983					0.2936701350367912
LLKLPLCTL	9	Unmodified	_LLKLPLCTL_					0	0	0			REV__ENST00000396410.8_1_16:15130957-15131065:+|nuORF	REV__ENST00000396410.8_1_16:15130957-15131065:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.8252136111259	2	507.325014	1012.63547	3.8127	0.0019343	-0.70766	-0.00035901	3.1051	0.0015753	507.32456791088856	73.351	0.59676	74.669	74.338	74.935	1.318					30	18	2	0	0	0	0.097511	1	30761	30761		23.148	9.6405	1	3561100	+		18959	12846	9160	9199	21984	21984					0.1296620916715483
LLKLPLLQL	9	Unmodified	_LLKLPLLQL_					0	0	0			REV__ENST00000432879.5_1_22:20103490-20103634:+|nuORF	REV__ENST00000432879.5_1_22:20103490-20103634:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8679077029228	2	525.867903	1049.72125	1.9818	0.0010422	0.11038	5.8047E-05	2.0922	0.0011002	525.8676829221986	83.478	0.34338	84.666	84.484	84.827	1.1879					23	10	3	0	0	0	0.049839	1	35026	35026		68.081	0.73685	1	2459900	+		18960	13036	9161	9200	21985	21985					0.19838117344329476
LLKLPLLQL	9	Unmodified	_LLKLPLLQL_					0	0	0			REV__ENST00000432879.5_1_22:20103490-20103634:+|nuORF	REV__ENST00000432879.5_1_22:20103490-20103634:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8670532107353	2	525.867903	1049.72125	2.4288	0.0012772	-1.5025	-0.0007901	0.92637	0.00048715	525.8666699005382	82.935	0.37569	84.605	84.415	84.79	1.67					23	11	3	0	0	0	0.11643	1	34834	34834		43.858	1.7637	1	2240200	+		18961	13036	9161	9200	21986	21986					0.19838117344329476
LLKLRWIRHTL	11	Unmodified	_LLKLRWIRHTL_					0	0	0			REV__ENST00000438770.6_1_19:37742814-37746809:+|nuORF	REV__ENST00000438770.6_1_19:37742814-37746809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9878112673759	4	362.98577	1447.91397	-0.4714	-0.00017111	3.6451	0.0013231	3.1737	0.001152	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.0393	1	13334	13334		0.36667	0.27183	1	563060000	+		18962	13070	9162	9201	21987	21987					0.20793252464181933
LLKLRWIRHTL	11	Unmodified	_LLKLRWIRHTL_					0	0	0			REV__ENST00000438770.6_1_19:37742814-37746809:+|nuORF	REV__ENST00000438770.6_1_19:37742814-37746809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9866821169853	4	362.98577	1447.91397	0.48914	0.00017755	3.1717	0.0011513	3.6608	0.0013288	362.9876474891707	31.174	1.2269	32.998	32.865	34.092	1.8246					99	44	3	0	0	0	1.0369	1	13326	13326		1.1098	0.6038	1	335070000	+		18963	13070	9162	9201	21988	21988					0.20793252464181933
LLKLWIRLSWR	11	Unmodified	_LLKLWIRLSWR_					0	0	0		ENST00000263168.3_1_1:113161809-113162112:+|nuORF	ENST00000263168.3_1_1:113161809-113162112:+|nuORF	ENST00000263168.3_1_1:113161809-113162112:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.6511108279228	3	495.313518	1482.91872	3.1487	0.0015596	2.7888	0.0013813	5.9376	0.0029409	495.31402717371543	105.76	0.14832	105.91	105.83	105.98	0.15859					25	7	5	0	0	0	1.0402	1	45117	45117		0.073264	0.073264	1	47814000			18964	5640	9163	9202	21989	21989					0.19658136606949483
LLKMLKLHLIL	11	Unmodified	_LLKMLKLHLIL_					0	0	0			REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	334.0319702029228	4	334.47936	1333.88834	-2.0254	-0.00067746	-1.2295	-0.00041125	-3.255	-0.0010887	334.72964635366816	34.726	0.90577	34.726	34.131	35.037	0					39	29	2	0	0	0	0.14606	1	14477	14477		0	0	1	846600	+		18965	13980	9164	9203	21990	21990					0.2347464189758739
LLKMLKLHLIL	11	Unmodified	_LLKMLKLHLIL_					0	0	0			REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4791137576103	4	334.47936	1333.88834	0.36211	0.00012112	-2.4683	-0.0008256	-2.1062	-0.00070448	334.47876618496844	26.168	2.3423	26.43	25.684	28.027	0.26173					307	76	6	0	0	0	1.039	1	10729	10729		0.45452	0.35968	1	151020000	+		18966	13980	9164	9203	21991	21991					0.2347464189758739
LLKMLKLHLIL	11	Unmodified	_LLKMLKLHLIL_					0	0	0			REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4791747927666	4	334.47936	1333.88834	0.12229	4.0905E-05	-2.1687	-0.00072538	-2.0464	-0.00068448	334.4789065153543	24.857	2.539	26.098	25.331	27.871	1.241					289	82	6	0	0	0	1.0402	1	10213	10213		0.08335	0.010087	1	178320000	+		18967	13980	9164	9203	21992	21992					0.2347464189758739
LLKMLKLHLIL	11	Unmodified	_LLKMLKLHLIL_					0	0	0			REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	REV__ENST00000575041.5_1_16:11864830-11868126:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4797851443291	4	334.47936	1333.88834	0.046622	1.5594E-05	-0.9104	-0.00030451	-0.86378	-0.00028892	334.47954727571795	24.206	0.55521	25.891	25.473	26.028	1.6845					71	17	5	0	0	0	1.0402	2	10047	10047;10084		0.08335	0.08335	1	114810000	+		18968	13980	9164	9203	21993;21994	21993					0.2347464189758739
LLKMVFRHRRF	11	Unmodified	_LLKMVFRHRRF_					0	0	0		sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3;sp|F5H8S6|US24_HCMVMTegumentproteinUS24OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US24PE=3SV=1	sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	502.2674743533134	3	501.634485	1501.88163	5.0378	0.0025272	0.75	0.00037622	5.7878	0.0029034	501.63473924978877	87.854	1.2899	88.941	88.174	89.464	1.0865					84	40	3	0	0	0	0.14606	1	36807	36807		3.0723	2.5663	1	1110500			18969	15970	9165	9204	21995	21995					0.15076141789540998
LLKMVFRHRRF	11	Unmodified	_LLKMVFRHRRF_					0	0	0		sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3;sp|F5H8S6|US24_HCMVMTegumentproteinUS24OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US24PE=3SV=1	sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	sp|P09700|US24_HCMVATegumentproteinUS24OS=Humancytomegalovirus(strainAD169)OX=10360GN=US24PE=3SV=3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	502.2680541872978	3	501.634485	1501.88163	4.3957	0.002205	1.1512	0.00057747	5.5469	0.0027825	501.6349628219679	87.568	1.2572	89.063	88.364	89.621	1.4953					75	39	3	0	0	0	0.14606	1	36654	36654		0.094841	0	1	995990			18970	15970	9165	9204	21996	21996					0.15076141789540998
LLKMVQPQ	8	Unmodified	_LLKMVQPQ_					0	0	0			REV__ENST00000489901.1_1_2:179997000-180008522:-|nuORF	REV__ENST00000489901.1_1_2:179997000-180008522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.7857238650322	2	478.783513	955.552473	1.9722	0.00094426	3.2911	0.0015757	5.2633	0.00252	478.78500102425073	71.612	0.28648	71.612	71.446	71.732	0					15	8	2	0	0	0	0.89008	1	29821	29821		2.5775	0.27475	1	874690	+		18971	11530	9166	9205	21997	21997					0.07291892439161529
LLKNIGALPV	10	Unmodified	_LLKNIGALPV_					0	0	0		MAST1|p.L518Tfs*15|1|0.11|ENSG00000105613|chr19:12865091-12865092|-/A|frameshift_variant;MAST1|p.G989Sfs*10|1|0.09|ENSG00000105613|chr19:12869256-12869257|-/TCAGGGGATGTGGCAGTAGAGAAGA|frameshift_variant;MAST1|p.G1062Vfs*53|1|0.13|ENSG00000105613|chr19:12871093-12871093|G/-|frameshift_variant;MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant;MAST2|p.G1261Wfs*149|1|0.07|ENSG00000086015|chr1:46034177-46034178|-/C|frameshift_variant;MAST2|p.K1410Pfs*14|1|0.08|ENSG00000086015|chr1:46034896-46034897|-/CC|frameshift_variant;ENSG00000105613|ENST00000251472|MAST1;nc|ENSG00000086015|Q6P0Q8-2|MAST2;MAST2|p.P1758Qfs*3|1|0.13|ENSG00000086015|chr1:46035942-46035967|CATGCCGAGGCTGCCCCCTCACCCAG/-|frameshift_variant;ENSG00000086015|ENST00000361297|MAST2	MAST1|p.L518Tfs*15|1|0.11|ENSG00000105613|chr19:12865091-12865092|-/A|frameshift_variant	MAST1|p.L518Tfs*15|1|0.11|ENSG00000105613|chr19:12865091-12865092|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1404296755791	2	519.33951	1036.66447	2.2547	0.001171	-0.99681	-0.00051768	1.2579	0.00065328	519.3389401097593	63.571	0.25245	63.571	63.398	63.651	0					12	7	2	0	0	0	0.12513	1	26494	26494		4.3292	0	1	538690			18972	1070	9167	9206	21998	21998					0.14760069787803332
LLKNYIILR	9	Unmodified	_LLKNYIILR_					0	0	0		Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|34|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|34|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|34|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	382.5851623415947	3	382.585015	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.888	1	55.858	55.358	56.358	1.9697								0	0	0	0.41189	1	22576	22576		7.609	0	1				18973	7613	9168	9207	21999	21999					0.16663734087501325
LLKRDFLKL	9	Unmodified	_LLKRDFLKL_					0	0	0		nc|ENSG00000119402|Q9UKT8-2|FBXW2;ENSG00000119402|ENST00000608872|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	nc|ENSG00000119402|Q9UKT8-2|FBXW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5851318240166	3	382.585015	1144.73321	0.17715	6.7777E-05	0.094941	3.6323E-05	0.2721	0.0001041	382.5849492612679	52.313	1.722	53.709	53.346	55.068	1.3966					136	61	3	0	0	0	0.16434	1	21994	21994		37.075	0.56844	1	6499600			18974	2069	9169	9208	22000	22000					0.16663734087501325
LLKSQKLLI	9	Unmodified	_LLKSQKLLI_					0	0	0		PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3651000857353	2	528.362985	1054.71142	1.9308	0.0010201	1.4493	0.00076578	3.3801	0.0017859	528.3637732081063	94.098	0.46671	94.098	93.9	94.367	0					34	14	3	0	0	0	0.30098	1	39317	39317		25.399	2.663	1	1493200			18975	8056	9170	9209	22001	22001					0.18624929338966467
LLKSQKLLI	9	Unmodified	_LLKSQKLLI_					0	0	0		PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3638183474541	2	528.362985	1054.71142	2.8223	0.0014912	0.72468	0.00038289	3.5469	0.0018741	528.3632887929728	93.428	0.41949	93.596	93.419	93.839	0.16835					31	12	3	0	0	0	0.42305	1	39147	39147		19.257	1.1106	1	1967600			18976	8056	9170	9209	22002	22002					0.18624929338966467
LLKSQKLLI	9	Unmodified	_LLKSQKLLI_					0	0	0		PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3643676638603	2	528.362985	1054.71142	4.1657	0.002201	-0.096544	-5.101E-05	4.0692	0.00215	528.3629743920887	92.481	0.68558	93.417	93.082	93.768	0.93624					55	20	4	0	0	0	0.20671	2	39016	38887;39016		32.305	3.2239	1	5612700			18977	8056	9170	9209	22003;22004	22004					0.18624929338966467
LLKSQKLLI	9	Unmodified	_LLKSQKLLI_					0	0	0		PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	PLCB4|p.Q1063_Q1064insSQ|1|0.18|ENSG00000101333|chr20:9459783-9459784|-/TCAGAG|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3650390505791	2	528.362985	1054.71142	3.402	0.0017975	0.40554	0.00021427	3.8076	0.0020118	528.3632069648436	91.934	0.64505	93.261	93.021	93.666	1.3269					51	19	4	0	0	0	0.20671	2	38674	38674;38777		32.305	1.6689	1	5541100			18978	8056	9170	9209	22005;22006	22005					0.18624929338966467
LLKTVLMIL	9	Unmodified	_LLKTVLMIL_					0	0	0		ENSG00000125910|ENST00000246115|S1PR4	ENSG00000125910|ENST00000246115|S1PR4	ENSG00000125910|ENST00000246115|S1PR4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.7988159060478	2	522.348489	1042.68242	2.6852	0.0014026	-1.6554	-0.00086472	1.0298	0.00053789	522.3483139687785	75.822	0.33125	77.589	77.42	77.751	1.7672					19	10	3	0	0	0	0.095205	1	31763	31763		25.399	3.6527	1	1282100			18979	2290	9171	9210	22007	22007					0.16279068718290546
LLKVMKTYKKK	11	Unmodified	_LLKVMKTYKKK_					0	0	0			REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1	REV__nc|ENSG00000131507|Q9BT67-2|NDFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.9756957888603	4	345.72563	1378.87341	0.37142	0.00012841	-2.3848	-0.00082447	-2.0133	-0.00069606	345.97571082065514	32.5	0.54638	34.325	34.032	34.579	1.8246					35	20	4	0	0	0	1.0362	1	13583	13583		1.3296	0.87513	1	2266100	+		18980	14432	9172	9211	22008	22008					0.19913150029537974
LLKYFVELV	9	Unmodified	_LLKYFVELV_					0	0	0			REV__ENST00000607647.5_1_7:135285632-135291519:+|nuORF	REV__ENST00000607647.5_1_7:135285632-135291519:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3441039919853	2	562.341718	1122.66888	1.3693	0.00077	3.2938	0.0018522	4.663	0.0026222	562.3431954195366	70.866	1.0717	71.19	70.679	71.751	0.32359					54	33	3	0	0	0	0.76456	1	29742	29742		4.756	0.81161	1	1190300	+		18981	10495	9173	9212	22009	22009					0.11245534210684127
LLKYFVELV	9	Unmodified	_LLKYFVELV_					0	0	0			REV__ENST00000607647.5_1_7:135285632-135291519:+|nuORF	REV__ENST00000607647.5_1_7:135285632-135291519:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3438598513603	2	562.341718	1122.66888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.816	1	55.137	54.637	55.637	0.32088								0	0	0	0.42693	1	22955	22955		2.0598	0	1		+		18982	10495	9173	9212	22010	22010					0.11245534210684127
LLKYRRRHRKH	11	Unmodified	_LLKYRRRHRKH_					0	0	0		ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	ENSG00000125266|ENST00000646441|EFNB2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	313.5309020876884	5	313.398119	1561.95422	-2.0091	-0.00062964	-0.032083	-1.0055E-05	-2.0412	-0.0006397	313.5994142136339	48.123	0.38186	48.123	47.905	48.286	0					14	11	2	0	0	0	0.14606	1	20147	20147		0	0	1	146630			18983	2253	9174	9213	22011	22011					0.19571611907304032
LLLAAARLAAA	11	Unmodified	_LLLAAARLAAA_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3438598513603	2	527.342584	1052.67061	2.093	0.0011037	-0.32876	-0.00017337	1.7642	0.00093034	527.3426241495953	51.988	0.33853	51.988	51.822	52.161	0					23	10	3	0	0	0	0.12312	2	21666	21666;21720		51.63	11.181	1	1854400			18984	3942	9175	9214	22012;22013	22012					0.1463858801932929
LLLAAARLAAA	11	Unmodified	_LLLAAARLAAA_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.3442870974541	2	527.342584	1052.67061	1.8721	0.00098721	1.4622	0.00077109	3.3343	0.0017583	527.3435778382952	51.465	0.43571	51.791	51.539	51.975	0.32554					27	13	3	0	0	0	0.09159	1	21572	21572		57.722	23.62	1	2554800			18985	3942	9175	9214	22014	22014					0.1463858801932929
LLLAAARLAAA	11	Unmodified	_LLLAAARLAAA_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3436157107353	2	527.342584	1052.67061	2.3143	0.0012204	0.17031	8.9811E-05	2.4846	0.0013102	527.3426054064672	49.779	0.46933	51.17	50.918	51.387	1.3911					25	14	2	0	0	0	0.062664	2	20836	20788;20836		63.961	16.889	1	5573900			18986	3942	9175	9214	22015;22016	22016					0.1463858801932929
LLLAAARLAAA	11	Unmodified	_LLLAAARLAAA_					0	0	0		ENSG00000167004|ENST00000300289|PDIA3;ENST00000471856.1_1_1:146649692-146651075:+|nuORF;ENST00000469684.1_1_15:44038662-44048907:+|nuORF	ENSG00000167004|ENST00000300289|PDIA3	ENSG00000167004|ENST00000300289|PDIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3438598513603	2	527.342584	1052.67061	1.8593	0.00098048	0.49618	0.00026166	2.3555	0.0012421	527.3428919352868	49.183	0.55671	51.16	50.792	51.349	1.9772					35	17	3	0	0	0	0.05109	2	20614	20565;20614		66.457	18.708	1	4658300			18987	3942	9175	9214	22017;22018	22018					0.1463858801932929
LLLAAPAQA	9	Unmodified	_LLLAAPAQA_					0	0	0		GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant;ENSG00000196743|ENST00000357164|GM2A	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	867.5315429568291	1	867.52983	866.522553	1.7992	0.0015608	-0.27779	-0.00024099	1.5214	0.0013198	867.5292571196014	46.257	0.28611	46.586	46.449	46.735	0.32899					14	9	2	0	0	0	0.11478	1	19428	19428		44.407	6.2558	1	356420			18988	4963	9176	9215	22019	22019					0.08395276765452309
LLLAAPAQA	9	Unmodified	_LLLAAPAQA_					0	0	0		GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant;ENSG00000196743|ENST00000357164|GM2A	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	867.5356323122978	1	867.52983	866.522553	2.5381	0.0022019	0.48604	0.00042165	3.0242	0.0026236	867.5304621367823	44.924	0.28315	46.289	46.118	46.401	1.3653					14	8	2	0	0	0	0.046276	2	18849	18797;18849		70.716	7.1527	1	1305000			18989	4963	9176	9215	22020;22021	22021					0.08395276765452309
LLLAAPAQA	9	Unmodified	_LLLAAPAQA_					0	0	0		GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant;ENSG00000196743|ENST00000357164|GM2A	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	GM2A|p.N167Sfs*10|1|0.04|ENSG00000196743|chr5:151267368-151267369|-/GCCTCAGTTATCCATCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	867.5288574099541	1	867.52983	866.522553	2.0719	0.0017974	-0.1724	-0.00014956	1.8995	0.0016479	867.5297951659636	44.396	0.28665	46.356	46.193	46.48	1.9596					14	8	2	0	0	0	0.087207	2	18581	18581;18637		53.576	6.6547	1	863790			18990	4963	9176	9215	22022;22023	22022					0.08395276765452309
LLLADEGSL	9	Unmodified	_LLLADEGSL_					0	0	0			REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7629577517509	2	465.760758	929.506963	2.8927	0.0013473	1.4591	0.00067961	4.3518	0.0020269	465.7615622556258	59.209	0.37496	61.178	60.94	61.315	1.969					17	11	2	0	0	0	0.49082	1	24864	24864		15.847	0	1	1103500	+		18991	12542	9177	9216	22024	22024					0.039389454577644756
LLLADEGSL	9	Unmodified	_LLLADEGSL_					0	0	0			REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	465.760758	929.506963	2.5415	0.0011837	4.1083	0.0019135	6.6497	0.0030972	465.7644871711207	61.737	0.1581	61.737	61.645	61.804	0	0.34937	0.0025444	NaN	15.847	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	860950	+		18992	12542	9177	9216							0.039389454577644756
LLLADEGSL	9	Unmodified	_LLLADEGSL_					0	0	0			REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	465.760758	929.506963	2.7839	0.0012966	3.261	0.0015189	6.045	0.0028155	465.7642118406075	61.084	0.15577	61.413	61.328	61.484	0.32974	0.026203	0.0017552	NaN	15.847	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629970	+		18993	12542	9177	9216							0.039389454577644756
LLLADEGSL	9	Unmodified	_LLLADEGSL_					0	0	0			REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	REV__ENST00000355396.7_2_9:114803584-114803758:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.760758	929.506963	2.8927	0.0013473	1.4591	0.00067961	4.3518	0.0020269	465.7615622556258	59.209	0.37496	61.178	60.94	61.315	1.969	-0.20961	7.667E-05	NaN	15.847	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1103500	+		18994	12542	9177	9216							0.039389454577644756
LLLALVTLVP	10	Unmodified	_LLLALVTLVP_					0	0	0			REV__nc|ENSG00000102854|Q13421-4|MSLN	REV__nc|ENSG00000102854|Q13421-4|MSLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2426025271416	3	351.242366	1050.70527	-0.31456	-0.00011049	2.7544	0.00096747	2.4399	0.00085699	351.24338489352726	20.872	1.9953	21.997	21.775	23.77	1.1254					139	65	5	0	0	0	0.89803	1	8801	8801		0.69767	0	1	92439000	+		18995	9084	9178	9217	22025	22025					0.18194411107424457
LLLAMPPV	8	Unmodified	_LLLAMPPV_					0	0	0			REV__CRB1|p.Q518P|1|0.03|ENSG00000134376|chr1:197421381-197421381|A/C|missense_variant	REV__CRB1|p.Q518P|1|0.03|ENSG00000134376|chr1:197421381-197421381|A/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	427.2811767458916	2	427.264425	852.514297	1.856	0.00079301	0.91776	0.00039213	2.7738	0.0011851	427.264969902382	84.439	0.40991	85.598	85.372	85.782	1.159					17	12	2	0	0	0	2.3239	1	35348	35348		0.79363	0	1	3814300	+		18996	8407	9179	9218	22026	22026					0.0821400652448574
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2785827517509	2	472.276575	942.538597	2.6849	0.001268	-0.13505	-6.3782E-05	2.5499	0.0012042	472.2767091527252	62.268	0.40471	62.268	62.118	62.522	0					22	12	3	0	0	0	0.09539	2	26001	25951;26001		50.855	10.305	1	1673100			18997	4372	9180	9219	22027;22028	22028					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	943.5471069216728	1	943.545874	942.538597	2.092	0.0019739	-2.0722	-0.0019552	0.019865	1.8743E-05	943.54476451701	62.332	0.31186	62.332	62.149	62.461	0					17	9	2	0	0	0	0.073578	1	25978	25978		58.679	3.9053	1	1319000			18998	4372	9180	9219	22029	22029					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	943.5489379763603	1	943.545874	942.538597	1.9965	0.0018838	-1.1971	-0.0011295	0.7994	0.00075427	943.5460500634567	61.862	0.37356	62.191	62.012	62.385	0.32974					24	11	3	0	0	0	0.042029	2	25932	25885;25932		74.423	16.951	1	1565000			18999	4372	9180	9219	22030;22031	22031					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2778198122978	2	472.276575	942.538597	2.7044	0.0012772	-0.87982	-0.00041552	1.8246	0.00086171	472.2766707512308	61.904	0.43517	62.234	61.981	62.416	0.32974					26	13	3	0	0	0	0.087207	2	25901	25901;25949		53.576	17.531	1	1747600			19000	4372	9180	9219	22032;22033	22032					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2785522341728	2	472.276575	942.538597	3.4095	0.0016102	-2.643	-0.0012482	0.76654	0.00036202	472.27648490525877	60.748	0.53941	62.168	61.933	62.473	1.4196					33	16	3	0	0	0	0.031324	2	25494	25447;25494		85.357	18.013	1	5058900			19001	4372	9180	9219	22034;22035	22035					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	943.5485107302666	1	943.545874	942.538597	3.0256	0.0028548	-2.4306	-0.0022934	0.59504	0.00056145	943.5456091529809	60.718	0.53941	62.138	61.933	62.473	1.4196					36	16	3	0	0	0	0.01454	2	25497	25448;25497		103.75	36.404	1	3689000			19002	4372	9180	9219	22036;22037	22037					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	943.5485717654228	1	943.545874	942.538597	3.4462	0.0032517	-1.2781	-0.0012059	2.1682	0.0020457	943.5456687369258	60.28	0.37823	62.245	62.008	62.387	1.9653					26	11	3	0	0	0	0.0080158	2	25291	25241;25291		110.67	39.541	1	3768400			19003	4372	9180	9219	22038;22039	22039					0.06502938211701803
LLLAQLSDA	9	Unmodified	_LLLAQLSDA_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2784606814384	2	472.276575	942.538597	3.5469	0.0016751	-0.85474	-0.00040367	2.6921	0.0012714	472.27650579096826	60.249	0.40986	62.214	61.977	62.387	1.9653					24	12	3	0	0	0	0.046276	2	25247	25247;25299		70.716	19.86	1	6856300			19004	4372	9180	9219	22040;22041	22040					0.06502938211701803
LLLATALGP	9	Unmodified	_LLLATALGP_					0	0	0		ENSG00000099994|ENST00000358321|SUSD2	ENSG00000099994|ENST00000358321|SUSD2	ENSG00000099994|ENST00000358321|SUSD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5537597537041	1	868.550231	867.542954	1.9358	0.0016813	0.5781	0.00050211	2.5139	0.0021834	868.5510949873415	72.209	0.4742	72.534	72.323	72.797	0.32494					33	14	3	0	0	0	0.037423	1	30229	30229		78.445	4.0484	1	3199100			19005	1225	9181	9220	22042	22042					0.10388447425282266
LLLCRHPVSI	10	Unmodified	_LLLCRHPVSI_					0	0	0			REV__chr3:127580163-127591890|420|13.89|0.83|4.07|-|ENST00000490643|TPRA1,TPRA1	REV__chr3:127580163-127591890|420|13.89|0.83|4.07|-|ENST00000490643|TPRA1,TPRA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8456909060478	2	575.841894	1149.66923	2.13	0.0012265	0.72072	0.00041502	2.8507	0.0016415	575.8427526825832	73.255	0.79836	73.58	73.371	74.169	0.32494					33	25	2	0	0	0	0.87699	1	30804	30804		3.9444	1.6417	1	1472100	+		19006	8314	9182	9221	22043	22043					0.10038630658914371
LLLCSICQPF	10	Unmodified	_LLLCSICQPF_					0	0	0		nc|ENSG00000154898|Q8IYA2|CCDC144CP;nc|ENSG00000266302|A2RUR9|CCDC144A	nc|ENSG00000154898|Q8IYA2|CCDC144CP	nc|ENSG00000154898|Q8IYA2|CCDC144CP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.7960693240166	2	568.795763	1135.57697	0.33422	0.0001901	-1.0931	-0.00062173	-0.75886	-0.00043163	568.7952169096159	51.376	0.95802	53.351	53.03	53.988	1.9753					108	33	5	0	0	0	0.57775	1	21479	21479		24.021	2.2739	1	32317000			19007	7899	9183	9222	22044	22044					0.014607845303544309
LLLDEEFKK	9	Unmodified	_LLLDEEFKK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-5|MYH14	REV__nc|ENSG00000105357|Q7Z406-5|MYH14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8256103396416	2	567.823889	1133.63323	1.6393	0.00093083	0.78747	0.00044715	2.4268	0.001378	567.8242749371014	58.216	0.32038	58.216	57.978	58.298	0					25	9	3	0	0	0	0.098163	1	24241	24241		49.933	4.2334	1	3394700	+		19008	9167	9184	9223	22045	22045					0.07175451963030355
LLLDEEFKK	9	Unmodified	_LLLDEEFKK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-5|MYH14	REV__nc|ENSG00000105357|Q7Z406-5|MYH14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8242675662041	2	567.823889	1133.63323	1.2578	0.00071419	0.15442	8.7682E-05	1.4122	0.00080188	567.823953804061	56.571	0.36848	57.986	57.784	58.153	1.4145					32	11	4	0	0	0	0.11643	1	23766	23766		43.858	0	1	12399000	+		19009	9167	9184	9223	22046	22046					0.07175451963030355
LLLDEEFKK	9	Unmodified	_LLLDEEFKK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-5|MYH14	REV__nc|ENSG00000105357|Q7Z406-5|MYH14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	567.823889	1133.63323	1.6393	0.00093083	0.78747	0.00044715	2.4268	0.001378	567.8242749371014	58.216	0.32038	58.216	57.978	58.298	0	0.16285	0.00044612	NaN	49.933	25	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3394700	+		19010	9167	9184	9223							0.07175451963030355
LLLDEEFKK	9	Unmodified	_LLLDEEFKK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-5|MYH14	REV__nc|ENSG00000105357|Q7Z406-5|MYH14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	567.823889	1133.63323	2.2519	0.0012787	0.54853	0.00031147	2.8004	0.0015902	567.8240638044255	57.708	0.3508	58.031	57.822	58.173	0.32298	-0.021951	0.00017477	NaN	49.933	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3850800	+		19011	9167	9184	9223							0.07175451963030355
LLLDEEFKK	9	Unmodified	_LLLDEEFKK_					0	0	0			REV__nc|ENSG00000105357|Q7Z406-5|MYH14	REV__nc|ENSG00000105357|Q7Z406-5|MYH14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	567.823889	1133.63323	1.1223	0.00063728	-0.032998	-1.8737E-05	1.0893	0.00061855	567.8238666824739	56.01	0.33804	57.979	57.811	58.149	1.9684	-0.07384	-0.00048564	NaN	49.933	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10427000	+		19012	9167	9184	9223							0.07175451963030355
LLLDGNMDIKL	11	Unmodified	_LLLDGNMDIKL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	622.8519775271416	2	622.849581	1243.68461	2.0373	0.0012689	0.86585	0.00053929	2.9032	0.0018082	622.8499983865077	72.69	0.22139	72.69	72.557	72.778	0					15	6	3	0	0	0	0.50855	1	30262	30262		23.79	0	1	699180			19013	2986	9185	9224	22047	22047					0.07251452665445868
LLLDGNMDIKL	11	Unmodified	_LLLDGNMDIKL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.8515502810478	2	622.849581	1243.68461	2.2874	0.0014247	-0.19599	-0.00012207	2.0914	0.0013026	622.8495976159966	71.064	0.26893	72.405	72.302	72.571	1.3415					14	8	2	0	0	0	0.040846	1	29833	29833		69.338	3.8645	1	2464300			19014	2986	9185	9224	22048	22048					0.07251452665445868
LLLDGNMDIKL	11	Unmodified	_LLLDGNMDIKL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.3516113162041	2	622.849581	1243.68461	0.74564	0.00046442	1.0258	0.00063891	1.7714	0.0011033	622.85019509917	70.632	0.27167	72.47	72.319	72.591	1.8378					17	8	3	0	0	0	0.23777	1	29647	29647		37.075	3.6297	1	1395800			19015	2986	9185	9224	22049	22049					0.07251452665445868
LLLDGNMDIKL	11	Unmodified	_LLLDGNMDIKL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	622.849581	1243.68461	1.7582	0.0010951	1.5441	0.00096176	3.3023	0.0020569	622.8504492729766	72.142	0.25587	72.467	72.323	72.579	0.32494	-0.040856	0.0010996	NaN	69.338	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	656470			19016	2986	9185	9224							0.07251452665445868
LLLDKEKQQL	10	Unmodified	_LLLDKEKQQL_					0	0	0			REV__ENST00000576826.1_1_16:3080666-3085497:-|nuORF	REV__ENST00000576826.1_1_16:3080666-3085497:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.3699828982353	2	614.368995	1226.72344	1.8913	0.001162	-0.81568	-0.00050113	1.0756	0.00066083	614.3685251260789	69.978	0.40913	69.978	69.77	70.179	0					41	12	4	0	0	0	0.81324	1	29094	29094		10.824	0.75	1	12096000	+		19017	10633	9186	9225	22050	22050					0.11914501291471424
LLLDMQNRL	9	Unmodified	_LLLDMQNRL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3162109255791	2	558.315709	1114.61686	1.385	0.0007733	0.98608	0.00055054	2.3711	0.0013238	558.3164817465138	54.741	0.19466	54.741	54.595	54.79	0					10	5	2	0	0	0	0.46566	1	22822	22822		17.113	0.96379	1	572210			19018	4005	9187	9226	22051	22051					0.06414047525299793
LLLDMQNRL	9	Unmodified	_LLLDMQNRL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3173095583916	2	558.315709	1114.61686	1.8419	0.0010284	0.41324	0.00023072	2.2551	0.0012591	558.3161801734415	54.075	0.25433	54.396	54.254	54.508	0.32088					11	7	2	0	0	0	0.37774	1	22647	22647		21.537	5.3879	1	527280			19019	4005	9187	9226	22052	22052					0.06414047525299793
LLLDMQNRL	9	Unmodified	_LLLDMQNRL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3154785037041	2	558.315709	1114.61686	0.80162	0.00044756	0.091073	5.0847E-05	0.89269	0.0004984	558.3173897749684	52.929	0.098022	54.329	54.248	54.346	1.4005					4	2	2	0	0	0	0.049839	1	22148	22148		68.081	15.812	1	1709800			19020	4005	9187	9226	22053	22053					0.06414047525299793
LLLDMQNRL	9	Unmodified	_LLLDMQNRL_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;nc|ENSG00000167986|Q16531-2|DDB1;ENST00000545894.1_1_11:61069637-61069871:-|nuORF;ENST00000451943.6_1_11:61067610-61070297:-|nuORF;ENST00000538470.2_1_11:61067610-61070684:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	558.315709	1114.61686	1.257	0.00070182	4.6654	0.0026048	5.9224	0.0033066	558.3187712892544	52.269	0.15239	54.241	54.2	54.352	1.9722	-0.18553	0.0038279	NaN	68.081	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1157900			19021	4005	9187	9226							0.06414047525299793
LLLDNILGTNF	11	Unmodified	_LLLDNILGTNF_					0	0	0			REV__tr|A0A7D6ZZG7|A0A7D6ZZG7_9CLOTTM2domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06185PE=4SV=1	REV__tr|A0A7D6ZZG7|A0A7D6ZZG7_9CLOTTM2domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06185PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8482543826103	2	616.847896	1231.68124	2.0711	0.0012776	-2.2202	-0.0013695	-0.14908	-9.196E-05	616.846246795251	67.974	0.49397	69.844	69.611	70.105	1.87					46	15	4	0	0	0	0.22376	1	28579	28579		38.176	0.024387	1	7906400	+		19022	15795	9188	9227	22054	22054					0.0746652588309189
LLLDPFLKV	9	Unmodified	_LLLDPFLKV_					0	0	0		ENST00000314028.10_1_17:80200842-80200935:-|nuORF	ENST00000314028.10_1_17:80200842-80200935:-|nuORF	ENST00000314028.10_1_17:80200842-80200935:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3387328982353	2	529.336436	1056.65832	2.5778	0.0013645	0.73502	0.00038907	3.3128	0.0017536	529.3369611019384	75.445	0.33981	76.752	76.585	76.925	1.3063					18	10	2	0	0	0	0.1109	1	31675	31675		45.7	0	1	2055300			19023	5818	9189	9228	22055	22055					0.13225551556274695
LLLDQSVRL	9	Unmodified	_LLLDQSVRL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.8249389529228	2	528.824224	1055.63389	2.6302	0.0013909	0.96194	0.0005087	3.5921	0.0018996	528.8246193485127	44.945	0.15877	46.31	46.21	46.369	1.3653					6	4	2	0	0	0	0.40005	1	18834	18834		20.415	1.0526	1	412480	+		19024	11745	9190	9229	22056	22056					0.10830291402771763
LLLDQSVRL	9	Unmodified	_LLLDQSVRL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8262206912041	2	528.824224	1055.63389	3.0145	0.0015941	0.39771	0.00021032	3.4122	0.0018045	528.82415064669	59.642	0.42294	61.611	61.435	61.857	1.969					27	13	3	0	0	0	0.12251	1	25069	25069		41.84	0	1	2819800	+		19025	11745	9190	9229	22057	22057					0.10830291402771763
LLLDQSVRL	9	Unmodified	_LLLDQSVRL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	528.824224	1055.63389	2.6302	0.0013909	0.96194	0.0005087	3.5921	0.0018996	528.8246193485127	44.945	0.15877	46.31	46.21	46.369	1.3653	-0.012418	0.00090489	NaN	20.415	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	412480	+		19026	11745	9190	9229							0.10830291402771763
LLLDQSVRL	9	Unmodified	_LLLDQSVRL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	528.824224	1055.63389	2.3302	0.0012323	-1.4724	-0.00077866	0.85776	0.0004536	528.8228776779914	44.376	0.22194	46.335	46.193	46.415	1.9596	0.012418	-0.0016698	NaN	20.415	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389530	+		19027	11745	9190	9229							0.10830291402771763
LLLDSNIRL	9	Unmodified	_LLLDSNIRL_					0	0	0		nc|ENSG00000125037|Q9P0I2-2|EMC3;ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF	nc|ENSG00000125037|Q9P0I2-2|EMC3	nc|ENSG00000125037|Q9P0I2-2|EMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.8249389529228	2	528.824224	1055.63389	2.2954	0.0012139	-0.95563	-0.00050536	1.3398	0.00070853	528.824366834299	61.934	0.53485	61.934	61.552	62.086	0					24	16	2	0	0	0	0.21592	2	25798	25798;25846		31.268	3.6395	1	1676100			19028	2247	9191	9230	22058;22059	22058					0.10830291402749026
LLLDSNIRL	9	Unmodified	_LLLDSNIRL_					0	0	0		nc|ENSG00000125037|Q9P0I2-2|EMC3;ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF	nc|ENSG00000125037|Q9P0I2-2|EMC3	nc|ENSG00000125037|Q9P0I2-2|EMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8256103396416	2	528.824224	1055.63389	2.1892	0.0011577	-1.1237	-0.00059422	1.0656	0.0005635	528.824420966422	61.357	0.4954	61.687	61.516	62.012	0.32974					24	15	2	0	0	0	0.20244	2	25677	25677;25731		32.786	3.7041	1	1809300			19029	2247	9191	9230	22060;22061	22060					0.10830291402749026
LLLDSNIRL	9	Unmodified	_LLLDSNIRL_					0	0	0		nc|ENSG00000125037|Q9P0I2-2|EMC3;ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF	nc|ENSG00000125037|Q9P0I2-2|EMC3	nc|ENSG00000125037|Q9P0I2-2|EMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.8260375857353	2	528.824224	1055.63389	2.6554	0.0014043	0.60276	0.00031875	3.2582	0.001723	528.824350831718	60.132	0.38933	61.552	61.39	61.779	1.4196					27	12	3	0	0	0	0.086433	2	25265	25213;25265		53.833	11.993	1	3547500			19030	2247	9191	9230	22062;22063	22063					0.10830291402749026
LLLDSNIRL	9	Unmodified	_LLLDSNIRL_					0	0	0		nc|ENSG00000125037|Q9P0I2-2|EMC3;ENSG00000125037|ENST00000245046|EMC3;ENST00000487465.5_1_3:10011273-10028351:-|nuORF	nc|ENSG00000125037|Q9P0I2-2|EMC3	nc|ENSG00000125037|Q9P0I2-2|EMC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8251220583916	2	528.824224	1055.63389	3.0145	0.0015941	0.39771	0.00021032	3.4122	0.0018045	528.82415064669	59.642	0.42294	61.611	61.435	61.857	1.969					27	13	3	0	0	0	0.12251	1	25014	25014		41.84	1.8823	1	2819800			19031	2247	9191	9230	22064	22064					0.10830291402749026
LLLDVPTAAV	10	Unmodified	_LLLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3087036013603	2	506.307875	1010.6012	2.1527	0.0010899	-0.98797	-0.00050022	1.1647	0.00058969	506.3075864320347	71.497	0.46083	72.838	72.601	73.061	1.3415					22	14	2	0	0	0	0.052892	2	30006	30006;30045		100.37	52.623	1	19225000			19032	5263	9192	9231	22065;22066	22065					0.09632084279905939
LLLDVPTAAV	10	Unmodified	_LLLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3089782595634	2	506.307875	1010.6012	1.153	0.00058378	-0.34824	-0.00017632	0.80478	0.00040747	506.3081416381983	71.038	0.55008	72.862	72.547	73.098	1.824					24	16	2	0	0	0	0.051733	2	29809	29809;29865		78.149	34.291	1	17628000			19033	5263	9192	9231	22067;22068	22067					0.09632084279905939
LLLDVPTAAV	10	Unmodified	_LLLDVPTAAV_					0	0	0		IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant;ENSG00000216490|ENST00000407280|IFI30	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	IFI30|p.L66Tfs*5|1|0.21|ENSG00000216490|chr19:18175102-18175103|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1011.610156238079	1	1011.60847	1010.6012	1.1834	0.0011971	-0.4198	-0.00042468	0.7636	0.00077246	1011.6094697108247	71.01	0.39504	72.834	72.639	73.034	1.824					24	12	3	0	0	0	0.057925	1	29821	29821		92.491	52.534	1	9694900			19034	5263	9192	9231	22069	22069					0.09632084279905939
LLLEHLECL	9	Unmodified	_LLLEHLECL_					0	0	0		nc|ENSG00000131626|Q13136-2|PPFIA1;PPFIA1|p.L1093Tfs*23|1|0.06|ENSG00000131626|chr11:70375053-70375054|-/T|frameshift_variant;ENSG00000131626|ENST00000253925|PPFIA1;PPFIA4|p.E159Tfs*8|1|0.11|ENSG00000143847|chr1:203044068-203044069|-/ACTCTCTTGCTCCTATGTAGGTA|frameshift_variant;nc|ENSG00000139220|O75334-3|PPFIA2;nc|ENSG00000139220|O75334-4|PPFIA2;nc|ENSG00000139220|O75334-2|PPFIA2;ENSG00000143847|ENST00000295706|PPFIA4;ENSG00000177380|ENST00000334186|PPFIA3;nc|ENSG00000143847|O75335|PPFIA4;PPFIA1|p.R461Kfs*27|1|0.07|ENSG00000131626|chr11:70335647-70335648|-/AGGTCATTGCTCGGCTGTGG|frameshift_variant;nc|ENSG00000177380|O75145-2|PPFIA3;nc|ENSG00000139220|O75334-5|PPFIA2;nc|ENSG00000139220|O75334-6|PPFIA2;ENST00000421230.6_1_19:49631605-49643027:+|nuORF;ENST00000602716.5_1_19:49631560-49640169:+|nuORF;ENSG00000139220|ENST00000549396|PPFIA2	nc|ENSG00000131626|Q13136-2|PPFIA1	nc|ENSG00000131626|Q13136-2|PPFIA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.7996703982353	2	541.79936	1081.58417	1.5252	0.00082635	0.046665	2.5283E-05	1.5719	0.00085164	541.7995167150275	66.59	0.94814	66.59	66.253	67.201	0					89	29	4	0	0	0	0.64949	1	27915	27915		9.3474	1.4373	1	8191400			19035	2498	9193	9232	22070	22070					0.046638404024406555
LLLEHLECL	9	Unmodified	_LLLEHLECL_					0	0	0		nc|ENSG00000131626|Q13136-2|PPFIA1;PPFIA1|p.L1093Tfs*23|1|0.06|ENSG00000131626|chr11:70375053-70375054|-/T|frameshift_variant;ENSG00000131626|ENST00000253925|PPFIA1;PPFIA4|p.E159Tfs*8|1|0.11|ENSG00000143847|chr1:203044068-203044069|-/ACTCTCTTGCTCCTATGTAGGTA|frameshift_variant;nc|ENSG00000139220|O75334-3|PPFIA2;nc|ENSG00000139220|O75334-4|PPFIA2;nc|ENSG00000139220|O75334-2|PPFIA2;ENSG00000143847|ENST00000295706|PPFIA4;ENSG00000177380|ENST00000334186|PPFIA3;nc|ENSG00000143847|O75335|PPFIA4;PPFIA1|p.R461Kfs*27|1|0.07|ENSG00000131626|chr11:70335647-70335648|-/AGGTCATTGCTCGGCTGTGG|frameshift_variant;nc|ENSG00000177380|O75145-2|PPFIA3;nc|ENSG00000139220|O75334-5|PPFIA2;nc|ENSG00000139220|O75334-6|PPFIA2;ENST00000421230.6_1_19:49631605-49643027:+|nuORF;ENST00000602716.5_1_19:49631560-49640169:+|nuORF;ENSG00000139220|ENST00000549396|PPFIA2	nc|ENSG00000131626|Q13136-2|PPFIA1	nc|ENSG00000131626|Q13136-2|PPFIA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.8015624880791	2	541.79936	1081.58417	1.9165	0.0010384	0.32696	0.00017715	2.2435	0.0012155	541.7996021805133	66.541	0.84643	66.865	66.495	67.341	0.32449					82	26	4	0	0	0	0.64949	2	27745	27745;28020		9.3474	1.4373	1	7054500			19036	2498	9193	9232	22071;22072	22071					0.046638404024406555
LLLEILHEI	9	Unmodified	_LLLEILHEI_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;ENST00000556039.5_1_14:53110276-53130527:-|nuORF;ENST00000554019.5_1_14:53110290-53130527:-|nuORF	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8388549685478	2	546.8368	1091.65905	2.2305	0.0012197	0.28069	0.00015349	2.5112	0.0013732	546.837031395826	85.338	0.31172	85.338	85.196	85.508	0					16	9	2	0	0	0	0.031324	1	35542	35542		85.357	34.502	1	1256600			19037	5030	9194	9233	22073	22073					0.11688346205323796
LLLEILHEI	9	Unmodified	_LLLEILHEI_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;ENST00000556039.5_1_14:53110276-53130527:-|nuORF;ENST00000554019.5_1_14:53110290-53130527:-|nuORF	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8378173708916	2	546.8368	1091.65905	2.5387	0.0013883	0.79407	0.00043423	3.3328	0.0018225	546.8371521014975	84.769	0.3194	85.03	84.854	85.173	0.26083					20	9	3	0	0	0	0.031324	2	35418	35418;35468		85.357	34.502	1	1251500			19038	5030	9194	9233	22074;22075	22074					0.11688346205323796
LLLEILHEI	9	Unmodified	_LLLEILHEI_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;ENST00000556039.5_1_14:53110276-53130527:-|nuORF;ENST00000554019.5_1_14:53110290-53130527:-|nuORF	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8382446169853	2	546.8368	1091.65905	1.1985	0.00065537	1.1692	0.00063936	2.3677	0.0012947	546.837311988093	83.846	0.37973	85.033	84.827	85.207	1.1879					21	11	2	0	0	0	0.0037165	2	35193	35142;35193		125.62	54.909	1	4035400			19039	5030	9194	9233	22076;22077	22077					0.11688346205323796
LLLEILHEI	9	Unmodified	_LLLEILHEI_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;ENST00000556039.5_1_14:53110276-53130527:-|nuORF;ENST00000554019.5_1_14:53110290-53130527:-|nuORF	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8372680544853	2	546.8368	1091.65905	1.7638	0.00096453	0.59914	0.00032763	2.363	0.0012922	546.8367041274728	83.345	0.40933	84.983	84.758	85.167	1.6379					25	12	3	0	0	0	0.013238	2	34979	34931;34979		104.8	44.41	1	4087500			19040	5030	9194	9233	22078;22079	22079					0.11688346205323796
LLLEKGFDTV	10	Unmodified	_LLLEKGFDTV_					0	0	0		tr|A0A7D6VS12|A0A7D6VS12_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07690PE=4SV=1	tr|A0A7D6VS12|A0A7D6VS12_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07690PE=4SV=1	tr|A0A7D6VS12|A0A7D6VS12_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8248168826103	2	567.823889	1133.63323	1.2578	0.00071419	0.15442	8.7682E-05	1.4122	0.00080188	567.823953804061	56.571	0.36848	57.986	57.784	58.153	1.4145					32	11	4	0	0	0	0.16044	2	23723	23679;23723		53.833	0	1	12399000			19041	16853	9195	9234	22080;22081	22081					0.07175451963030355
LLLEPALVLG	10	Unmodified	_LLLEPALVLG_					0	0	0			REV__ENSG00000100263|ENST00000216085|RHBDD3	REV__ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5598632693291	3	346.558354	1036.65323	1.6965	0.00058795	2.8814	0.00099856	4.5779	0.0015865	346.5592871561179	62.96	0.91572	64.374	63.711	64.626	1.4134					32	17	2	0	0	0	0.89803	1	26388	26388		0.69767	0	1	1656900	+		19042	8979	9196	9235	22082	22082					0.13637247693645804
LLLEPALVLG	10	Unmodified	_LLLEPALVLG_					0	0	0			REV__ENSG00000100263|ENST00000216085|RHBDD3	REV__ENSG00000100263|ENST00000216085|RHBDD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5593749880791	3	346.558354	1036.65323	1.2449	0.00043143	2.0592	0.00071363	3.3041	0.0011451	346.55908020635275	65.647	0.58287	67.046	66.757	67.34	1.3989					49	18	3	0	0	0	0.89803	1	27596	27596		0.77653	0	1	2533300	+		19043	8979	9196	9235	22083	22083					0.13637247693645804
LLLEPGSLYIL	11	Unmodified	_LLLEPGSLYIL_					0	0	0		ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	615.8732177615166	2	615.87084	1229.72713	1.8441	0.0011357	1.484	0.00091398	3.3281	0.0020497	615.8717477296628	96.814	0.14591	96.814	96.748	96.894	0					10	4	3	0	0	0	0.031838	1	40472	40472		78.149	28.216	1	3073500			19044	2268	9197	9236	22084	22084					0.12145171065344584
LLLEPGSLYIL	11	Unmodified	_LLLEPGSLYIL_					0	0	0		ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	MSMS	GG20161007_CRH_Patient100_A02_02	2	615.8729736208916	2	615.87084	1229.72713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.712	1	96.817	96.317	97.317	0.105								0	0	0	0.00020089	1	40471	40471		68.081	13.307	1				19045	2268	9197	9236	22085	22085					0.12145171065344584
LLLEPGSLYIL	11	Unmodified	_LLLEPGSLYIL_					0	0	0		ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8702270388603	2	615.87084	1229.72713	3.6529	0.0022497	-2.5937	-0.0015974	1.0592	0.00065235	615.8697554670401	96.456	0.15478	96.74	96.651	96.806	0.28442					8	4	3	0	0	0	0.03513	1	40585	40585		74.929	13.572	1	3929900			19046	2268	9197	9236	22086	22086					0.12145171065344584
LLLEPGSLYIL	11	Unmodified	_LLLEPGSLYIL_					0	0	0		ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	ENSG00000125652|ENST00000245812|ALKBH7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	615.87084	1229.72713	3.0867	0.001901	4.5578	0.002807	7.6445	0.004708	615.8741022030159	96.311	0.15118	96.617	96.513	96.664	0.3062	-0.10677	0.0041357	NaN	78.149	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3720500			19047	2268	9197	9236							0.12145171065344584
LLLETVFHL	9	Unmodified	_LLLETVFHL_					0	0	0		ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.8257934451103	2	542.823692	1083.63283	2.2733	0.001234	0.81421	0.00044197	3.0876	0.001676	542.8243357821442	85.062	0.38425	85.062	84.845	85.229	0					25	11	3	0	0	0	0.057024	2	35455	35410;35455		74.396	40.294	1	2885000			19048	7242	9198	9237	22087;22088	22088					0.09436077033865331
LLLETVFHL	9	Unmodified	_LLLETVFHL_					0	0	0		ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.8265869021416	2	542.823692	1083.63283	2.5123	0.0013637	1.023	0.00055531	3.5353	0.001919	542.8243864311678	84.448	0.41796	84.709	84.501	84.919	0.26083					30	12	3	0	0	0	0.10473	3	35277	35277;35319;35365		63.563	29.46	1	3425900			19049	7242	9198	9237	22089;22090;22091	22089					0.09436077033865331
LLLETVFHL	9	Unmodified	_LLLETVFHL_					0	0	0		ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8243896365166	2	542.823692	1083.63283	1.8233	0.00098973	0.1379	7.4853E-05	1.9612	0.0010646	542.8238157472186	83.501	0.40737	84.689	84.516	84.923	1.1879					28	12	3	0	0	0	0.057024	1	35053	35053		86.121	40.1	1	2978900			19050	7242	9198	9237	22092	22092					0.09436077033865331
LLLETVFHL	9	Unmodified	_LLLETVFHL_					0	0	0		ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	ENST00000546387.1_1_12:44238581-44238653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8240844607353	2	542.823692	1083.63283	2.2939	0.0012452	-1.3658	-0.00074138	0.92811	0.0005038	542.8228526417929	83.014	0.31267	84.652	84.478	84.791	1.6379					22	9	3	0	0	0	0.04145	1	34828	34828		86.121	32.546	1	3559900			19051	7242	9198	9237	22093	22093					0.09436077033865331
LLLEYGWVL	9	Unmodified	_LLLEYGWVL_					0	0	0		tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3192626833916	2	553.318243	1104.62193	2.4392	0.0013497	-3.2099	-0.0017761	-0.77066	-0.00042642	553.3167142797598	49.984	0.57012	51.375	51.197	51.767	1.3911					31	17	3	0	0	0	0.09539	1	20937	20937		50.855	3.2606	1	3302200			19052	16469	9199	9238	22094	22094					0.07380674659566466
LLLEYGWVL	9	Unmodified	_LLLEYGWVL_					0	0	0		tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	tr|A0A553SPH6|A0A553SPH6_NIACIIntegralmembraneproteinTerCOS=NialliacirculansOX=1397GN=CEQ21_26445PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	553.318243	1104.62193	1.6764	0.00092756	-3.1534	-0.0017448	-1.477	-0.00081725	553.3167996659708	51.283	0.24899	51.611	51.449	51.698	0.32824	0.06075	-0.00056638	NaN	50.855	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615620			19053	16469	9199	9238							0.07380674659566466
LLLFELII	8	Unmodified	_LLLFELII_					0	0	0			REV__ENSG00000127515|ENST00000641129|OR7A10	REV__ENSG00000127515|ENST00000641129|OR7A10	MSMS	GG20161007_CRH_Patient100_A02_02	2	487.3219177126884	2	487.320254	972.625956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.89	1	105.95	105.45	106.45	0.05455								0	0	0	1.0178	1	45004	45004		0.79363	0	1		+		19054	9717	9200	9239	22095	22095					0.13854764153290944
LLLFELKRRFV	11	Unmodified	_LLLFELKRRFV_					0	0	0			REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.5768310427666	4	359.230237	1432.89184	1.1014	0.00039567	0.33298	0.00011961	1.4344	0.00051529	359.22993412334597	39.486	0.51278	40.796	40.334	40.846	1.3102					19	16	2	0	0	0	0.14606	1	16575	16575		1.4551	0.94916	1	875430	+		19055	8732	9201	9240	22096	22096					0.19271027995773693
LLLFELKRRFV	11	Unmodified	_LLLFELKRRFV_					0	0	0			REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	359.230237	1432.89184	0.98071	0.0003523	1.8368	0.00065983	2.8175	0.0010121	359.4825953178247	38.939	0.19463	40.776	40.686	40.88	1.8366	-0.010205	0.0017241	NaN	1.4551	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	448630	+		19056	8732	9201	9240							0.19271027995773693
LLLFFLLL	8	Unmodified	_LLLFFLLL_					0	0	0		ENSG00000271824|ENST00000607574|SMIM32	REV__ENSG00000271824|ENST00000607574|SMIM32	REV__ENSG00000271824|ENST00000607574|SMIM32	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.2252685427666	3	331.224535	990.651776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.357	1	26.041	25.541	26.541	1.6845								0	0	0	1.0178	1	10173	10173		0	0	1				19057	5447	9202	9241	22097	22097					0.15607658395583712
LLLFLKWI	8	Unmodified	_LLLFLKWI_					0	0	0			REV__ENST00000262288.7_1_17:55083728-55083794:+|nuORF	REV__ENST00000262288.7_1_17:55083728-55083794:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.3977538943291	2	523.344064	1044.67357	1.9138	0.0010016	-2.9301	-0.0015334	-1.0163	-0.00053188	523.3422582596683	83.921	0.33643	85.559	85.412	85.748	1.6379					14	10	2	0	0	0	2.3239	1	35137	35137		2.8892	0	1	504100	+		19058	12193	9203	9242	22098	22098					0.15302463144121248
LLLFPIKM	8	Unmodified	_LLLFPIKM_					0	0	0			REV__nc|ENSG00000101846|P08842|STS	REV__nc|ENSG00000101846|P08842|STS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.8111755251884	2	487.808999	973.603446	3.3444	0.0016314	1.0591	0.00051665	4.4035	0.0021481	487.80933694241406	89.182	0.48246	89.406	89.101	89.583	0.22359					40	14	4	0	0	0	0.89178	1	37400	37400		0.69038	0	1	3923100	+		19059	14405	9204	9243	22099	22099					0.11558841484009008
LLLFPIKM	8	Unmodified	_LLLFPIKM_					0	0	0			REV__nc|ENSG00000101846|P08842|STS	REV__nc|ENSG00000101846|P08842|STS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.8116943240166	2	487.808999	973.603446	5.7569	0.0028083	0.44145	0.00021534	6.1984	0.0030236	487.80879006248944	88.425	0.41904	89.482	89.272	89.691	1.0562					27	12	3	0	0	0	0.89008	1	37287	37287		2.5775	0	1	2440100	+		19060	14405	9204	9243	22100	22100					0.11558841484009008
LLLFQIIL	8	Unmodified	_LLLFQIIL_					0	0	0		nc|ENSG00000059769|Q9H1X3-2|DNAJC25;ENST00000463589.5_1_9:114405367-114415499:+|nuORF;ENSG00000059769|ENST00000313525|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.8272277712822	2	486.828246	971.64194	1.2032	0.00058576	-2.6532	-0.0012917	-1.45	-0.00070591	486.8268213540645	106.16	0.17503	106.16	106.07	106.25	0					25	8	4	0	0	0	0.89176	1	45226	45226		0.79363	0	1	192430000			19061	741	9205	9244	22101	22101					0.15498470390184593
LLLFQIIL	8	Unmodified	_LLLFQIIL_					0	0	0		nc|ENSG00000059769|Q9H1X3-2|DNAJC25;ENST00000463589.5_1_9:114405367-114415499:+|nuORF;ENSG00000059769|ENST00000313525|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	nc|ENSG00000059769|Q9H1X3-2|DNAJC25	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8272582888603	2	486.828246	971.64194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.99	1	106.15	105.65	106.65	0.15859								0	0	0	1.0178	1	45274	45274		0.79363	0	1				19062	741	9205	9244	22102	22102					0.15498470390184593
LLLFWLGW	8	Unmodified	_LLLFWLGW_					0	0	0		ENSG00000168003|ENST00000338663|SLC3A2;nc|ENSG00000168003|P08195-3|SLC3A2;nc|ENSG00000168003|P08195|SLC3A2;nc|ENSG00000168003|P08195-5|SLC3A2;nc|ENSG00000168003|P08195-4|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	ENSG00000168003|ENST00000338663|SLC3A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.7702514529228	2	524.304939	1046.59532	2.4171	0.0012673	2.2603	0.0011851	4.6773	0.0024524	524.8065385958269	69.53	0.15932	71.383	71.324	71.484	1.853					6	4	2	0	0	0	2.3239	1	29186	29186		11.114	4.7604	1	621710			19063	4006	9206	9245	22103	22103					0.07389030558874765
LLLGILTKV	9	Unmodified	_LLLGILTKV_					0	0	0		ENST00000543095.6_2_14:31872224-31889787:-|nuORF	ENST00000543095.6_2_14:31872224-31889787:-|nuORF	ENST00000543095.6_2_14:31872224-31889787:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	485.2318603396416	2	485.338978	968.663404	3.4836	0.0016907	-0.75211	-0.00036503	2.7315	0.0013257	485.33855494834063	72.818	0.19128	74.148	74.004	74.195	1.3297					9	5	2	0	0	0	0.093582	1	30572	30572		22.658	9.6156	1	567710			19064	7225	9207	9246	22104	22104					0.1778185541890025
LLLGILTKV	9	Unmodified	_LLLGILTKV_					0	0	0		ENST00000543095.6_2_14:31872224-31889787:-|nuORF	ENST00000543095.6_2_14:31872224-31889787:-|nuORF	ENST00000543095.6_2_14:31872224-31889787:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	485.338978	968.663404	2.6482	0.0012853	0.54565	0.00026483	3.1939	0.0015501	485.3391104322272	72.216	0.21549	74.026	73.921	74.137	1.8101	-0.060794	0.00085342	NaN	22.658	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	599050			19065	7225	9207	9246							0.1778185541890025
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2754089236259	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.16	1	113.33	112.83	113.83	0.16914								0	0	0	0.66254	1	49070	49070		0.15932	0.064481	1		+		19066	14865	9208	9247	22105	22105					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2744018435478	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.42	1	113.6	113.1	114.1	0.17579								0	0	0	0.66254	1	49176	49176		0.15932	0.064481	1		+		19067	14865	9208	9247	22106	22106					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2757446169853	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.55	1	113.73	113.23	114.23	0.17579								0	0	0	0.66254	1	49227	49227		0.15932	0	1		+		19068	14865	9208	9247	22107	22107					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2754394412041	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.68	1	113.86	113.36	114.36	0.17579								0	0	0	0.66254	1	49280	49280		0.15932	0.064481	1		+		19069	14865	9208	9247	22108	22108					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2759277224541	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.84	1	114.02	113.52	114.52	0.17579								0	0	0	0.66254	1	49344	49344		0.15932	0.064481	1		+		19070	14865	9208	9247	22109	22109					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2749816775322	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.49	1	114.68	114.18	115.18	0.18281								0	0	0	0.66254	1	49607	49607		0.15932	0.064481	1		+		19071	14865	9208	9247	22110	22110					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2752563357353	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.62	1	114.81	114.31	115.31	0.18399								0	0	0	0.66254	1	49658	49658		0.15932	0.064481	1		+		19072	14865	9208	9247	22111	22111					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2757140994072	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.75	1	114.93	114.43	115.43	0.18399								0	0	0	0.66254	1	49710	49710		0.15932	0.064481	1		+		19073	14865	9208	9247	22112	22112					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2750121951103	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	115.07	114.57	115.57	0.18399								0	0	0	0.66254	1	49764	49764		0.15932	0.064481	1		+		19074	14865	9208	9247	22113	22113					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2749511599541	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.08	1	115.26	114.76	115.76	0.18399								0	0	0	0.66254	1	49840	49840		0.15932	0.064481	1		+		19075	14865	9208	9247	22114	22114					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2755004763603	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.33	1	115.51	115.01	116.01	0.18399								0	0	0	0.66254	1	49943	49943		0.15932	0.064481	1		+		19076	14865	9208	9247	22115	22115					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2753478884697	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.46	1	115.64	115.14	116.14	0.18399								0	0	0	0.66254	1	49994	49994		0.15932	0.064481	1		+		19077	14865	9208	9247	22116	22116					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2752258181572	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.59	1	115.78	115.28	116.28	0.18399								0	0	0	0.66254	1	50049	50049		0.15932	0.064481	1		+		19078	14865	9208	9247	22117	22117					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2745544314384	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.81	1	116.01	115.51	116.51	0.19572								0	0	0	0.66254	1	50136	50136		0.15932	0.064481	1		+		19079	14865	9208	9247	22118	22118					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2755920290947	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.98	1	116.17	115.67	116.67	0.19572								0	0	0	0.66254	1	50203	50203		0.15932	0.064481	1		+		19080	14865	9208	9247	22119	22119					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2749511599541	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.36	1	116.56	116.06	117.06	0.19572								0	0	0	0.66254	1	50358	50358		0.15932	0.064481	1		+		19081	14865	9208	9247	22120	22120					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2755309939384	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.55	1	116.75	116.25	117.25	0.19572								0	0	0	0.66254	1	50434	50434		0.15932	0.064481	1		+		19082	14865	9208	9247	22121	22121					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2753173708916	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.68	1	116.88	116.38	117.38	0.19572								0	0	0	0.66254	1	50486	50486		0.15932	0.064481	1		+		19083	14865	9208	9247	22122	22122					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2751647830009	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.85	1	117.05	116.55	117.55	0.19572								0	0	0	0.66254	1	50555	50555		0.15932	0.064481	1		+		19084	14865	9208	9247	22123	22123					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2747070193291	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.01	1	117.22	116.72	117.72	0.21096								0	0	0	0.66254	1	50618	50618		0.15932	0	1		+		19085	14865	9208	9247	22124	22124					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2751037478447	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.17	1	117.38	116.88	117.88	0.21096								0	0	0	0.66254	1	50683	50683		0.15932	0	1		+		19086	14865	9208	9247	22125	22125					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2750121951103	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.31	1	117.52	117.02	118.02	0.21096								0	0	0	0.66254	1	50738	50738		0.15932	0	1		+		19087	14865	9208	9247	22126	22126					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2749206423759	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.42	1	117.63	117.13	118.13	0.21096								0	0	0	0.66254	1	50784	50784		0.15932	0.064481	1		+		19088	14865	9208	9247	22127	22127					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2748596072197	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.59	1	117.8	117.3	118.3	0.21096								0	0	0	0.66254	1	50855	50855		0.15932	0.064481	1		+		19089	14865	9208	9247	22128	22128					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2745239138603	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.36	1	118.59	118.09	119.09	0.23128								0	0	0	0.66254	1	51164	51164		0.15932	0.064481	1		+		19090	14865	9208	9247	22129	22129					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2755615115166	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.6	1	118.84	118.34	119.34	0.23128								0	0	0	0.66254	1	51264	51264		0.15932	0.064481	1		+		19091	14865	9208	9247	22130	22130					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2746154665947	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.73	1	118.96	118.46	119.46	0.23128								0	0	0	0.66254	1	51317	51317		0.15932	0.064481	1		+		19092	14865	9208	9247	22131	22131					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2740966677666	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.17	1	119.4	118.9	119.9	0.23128								0	0	0	0.66254	1	51491	51491		0.15932	0.064481	1		+		19093	14865	9208	9247	22132	22132					0.20896880155692088
LLLGKKVKKY	10	Unmodified	_LLLGKKVKKY_					0	0	0			REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	REV__tr|A0A553SIS2|A0A553SIS2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15390PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2751953005791	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.91	1	120.15	119.65	120.65	0.243								0	0	0	0.66254	1	51790	51790		0.15932	0	1		+		19094	14865	9208	9247	22133	22133					0.20896880155692088
LLLGQLVEV	9	Unmodified	_LLLGQLVEV_					0	0	0		ENST00000466514.5_1_7:150725553-150731828:+|nuORF;ABCB8|p.Q260Hfs*14|1|0.37|ENSG00000197150|chr7:151034792-151034793|-/CTGGGCTCTTTCGCAGGGACTGCTGACCTTC|frameshift_variant;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.3138915896416	2	492.310418	982.606283	2.0265	0.00099766	0.91455	0.00045024	2.941	0.0014479	492.3114932219645	83.46	0.27666	83.46	83.289	83.566	0					14	8	2	0	0	0	0.3154	1	34769	34769		24.674	5.2349	1	655490			19095	7	9209	9248	22134	22134					0.11428388142519452
LLLGQLVEV	9	Unmodified	_LLLGQLVEV_					0	0	0		ENST00000466514.5_1_7:150725553-150731828:+|nuORF;ABCB8|p.Q260Hfs*14|1|0.37|ENSG00000197150|chr7:151034792-151034793|-/CTGGGCTCTTTCGCAGGGACTGCTGACCTTC|frameshift_variant;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3128539919853	2	492.310418	982.606283	2.9571	0.0014558	1.6106	0.00079293	4.5677	0.0022487	492.3109208233875	82.919	0.2776	83.19	83.06	83.337	0.27029					14	8	2	0	0	0	0.15478	1	34675	34675		38.151	13.477	1	1076500			19096	7	9209	9248	22135	22135					0.11428388142519452
LLLGQLVEV	9	Unmodified	_LLLGQLVEV_					0	0	0		ENST00000466514.5_1_7:150725553-150731828:+|nuORF;ABCB8|p.Q260Hfs*14|1|0.37|ENSG00000197150|chr7:151034792-151034793|-/CTGGGCTCTTTCGCAGGGACTGCTGACCTTC|frameshift_variant;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3120910525322	2	492.310418	982.606283	3.8423	0.0018916	0.4205	0.00020702	4.2628	0.0020986	492.31059661249833	81.902	0.3421	83.115	82.975	83.317	1.2125					19	10	2	0	0	0	0.34572	1	34444	34444		23.148	5.0134	1	1557000			19097	7	9209	9248	22136	22136					0.11428388142519452
LLLGQLVEV	9	Unmodified	_LLLGQLVEV_					0	0	0		ENST00000466514.5_1_7:150725553-150731828:+|nuORF;ABCB8|p.Q260Hfs*14|1|0.37|ENSG00000197150|chr7:151034792-151034793|-/CTGGGCTCTTTCGCAGGGACTGCTGACCTTC|frameshift_variant;nc|ENSG00000197150|Q9NUT2-4|ABCB8;nc|ENSG00000197150|Q9NUT2-3|ABCB8;ENSG00000197150|ENST00000358849|ABCB8;nc|ENSG00000197150|Q9NUT2|ABCB8	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	ENST00000466514.5_1_7:150725553-150731828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3126708865166	2	492.310418	982.606283	3.8118	0.0018766	0.28022	0.00013795	4.092	0.0020145	492.31083276218055	81.476	0.39949	83.172	82.983	83.383	1.6959					25	12	3	0	0	0	0.10722	2	34173	34173;34224		46.921	14.615	1	1260200			19098	7	9209	9248	22137;22138	22137					0.11428388142519452
LLLGSIPVLI	10	Unmodified	_LLLGSIPVLI_					0	0	0			REV__tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	REV__tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3545410037041	2	519.352086	1036.68962	3.5499	0.0018437	0.83534	0.00043384	4.3853	0.0022775	519.3525521922313	74.227	0.60883	75.545	75.279	75.888	1.318					67	19	5	0	0	0	0.081078	1	31091	31091		67.344	5.9864	1	79949000	+		19099	15110	9210	9249	22139	22139					0.1727412459038078
LLLHLTGV	8	Unmodified	_LLLHLTGV_					0	0	0			REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2802001833916	2	433.278921	864.543289	1.9156	0.00082998	0.46345	0.0002008	2.379	0.0010308	433.2792174111596	54.406	0.56217	56.375	56.16	56.722	1.9684					29	18	2	0	0	0	0.87655	2	22873	22782;22873		11.114	1.767	1	1941000	+		19100	9457	9211	9250	22140;22141	22141					0.10559867145138924
LLLHLTGV	8	Unmodified	_LLLHLTGV_					0	0	0			REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	433.278921	864.543289	2.564	0.0011109	1.3629	0.0005905	3.9268	0.0017014	433.27970967169557	56.093	0.3688	56.414	56.362	56.731	0.32088	0.0069298	0.00073014	NaN	11.114	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1141400	+		19101	9457	9211	9250							0.10559867145138924
LLLHLTGV	8	Unmodified	_LLLHLTGV_					0	0	0			REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	433.278921	864.543289	1.6654	0.00072159	0.24886	0.00010782	1.9143	0.00082941	433.2790112692446	55.027	0.51805	56.432	56.152	56.67	1.4048	0.025126	-0.00023522	NaN	11.114	28	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2252100	+		19102	9457	9211	9250							0.10559867145138924
LLLHLTGV	8	Unmodified	_LLLHLTGV_					0	0	0			REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	REV__QPCT|p.V19Gfs*40|1|0.58|ENSG00000115828|chr2:37344783-37344799|CTGGTGGCCGCCCTGCC/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	433.278921	864.543289	1.9156	0.00082998	0.46345	0.0002008	2.379	0.0010308	433.2792174111596	54.406	0.56217	56.375	56.16	56.722	1.9684	-0.032056	-4.9261E-05	NaN	11.114	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1941000	+		19103	9457	9211	9250							0.10559867145138924
LLLIEIPIK	9	Unmodified	_LLLIEIPIK_					0	0	0			REV__tr|A0A7D7AF40|A0A7D7AF40_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04560PE=3SV=1	REV__tr|A0A7D7AF40|A0A7D7AF40_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04560PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2434875369072	3	351.242366	1050.70527	0.33569	0.00011791	2.3995	0.00084281	2.7352	0.00096072	351.24325833524324	21.886	1.4635	22.109	21.872	23.336	0.223					130	48	6	0	0	0	0.85206	1	9155	9155		0.26902	0	1	59592000	+		19104	15917	9212	9251	22142	22142					0.1819441110740172
LLLIFHLLP	9	Unmodified	_LLLIFHLLP_					0	0	0		nc|ENSG00000106771|Q9H330-3|TMEM245;ENSG00000106771|ENST00000374586|TMEM245;ENST00000482868.1_1_9:111798484-111800393:-|nuORF	nc|ENSG00000106771|Q9H330-3|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2399474978447	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.464	1	95.464	94.964	95.964	0								0	0	0	0.42693	1	39900	39900		1.1933	0.12188	1				19105	1584	9213	9252	22143	22143					0.15929848172845595
LLLIVMPL	8	Unmodified	_LLLIVMPL_					0	0	0			REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5384399294853	3	304.538125	910.592547	-0.31128	-9.4797E-05	-1.0532	-0.00032074	-1.3645	-0.00041553	304.5380389557099	28.96	0.36432	30.242	30.069	30.433	1.2825					20	11	2	0	0	0	0.89185	1	12149	12149		0.45834	0	1	1604400	+		19106	11204	9214	9253	22144	22144					0.1336743910972018
LLLIVMPL	8	Unmodified	_LLLIVMPL_					0	0	0			REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.538125	910.592547	0.44238	0.00013472	-2.2477	-0.00068451	-1.8053	-0.00054979	304.5378273713371	30.145	0.29601	30.431	30.322	30.618	0.2859	0.094274	-0.00067459	NaN	0.45834	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1839700	+		19107	11204	9214	9253							0.1336743910972018
LLLIVMPL	8	Unmodified	_LLLIVMPL_					0	0	0			REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	REV__ENST00000525490.5_1_11:19138758-19188042:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.538125	910.592547	-0.31128	-9.4797E-05	-1.0532	-0.00032074	-1.3645	-0.00041553	304.5380389557099	28.96	0.36432	30.242	30.069	30.433	1.2825	-0.094274	0.00041673	NaN	0.45834	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1604400	+		19108	11204	9214	9253							0.1336743910972018
LLLKEPQI	8	Unmodified	_LLLKEPQI_					0	0	0			REV__nc|ENSG00000089012|Q9P1W8-3|SIRPG	REV__nc|ENSG00000089012|Q9P1W8-3|SIRPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.3067809939384	2	477.305136	952.595718	2.3348	0.0011144	0.7608	0.00036313	3.0957	0.0014776	477.30564898939815	44.12	0.47229	46.063	45.799	46.271	1.9438					26	14	2	0	0	0	0.67986	1	18529	18529		32.305	0	1	6185200	+		19109	8879	9215	9254	22145	22145					0.11752405488095974
LLLKKKKKLIV	11	Unmodified	_LLLKKKKKLIV_					0	0	0			REV__NOS1AP|p.S460Vfs*43|1|0.07|ENSG00000198929|chr1:162367321-162367322|-/A|frameshift_variant	REV__NOS1AP|p.S460Vfs*43|1|0.07|ENSG00000198929|chr1:162367321-162367322|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	662.4933959841728	2	662.494333	1322.97411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.36	1	102.54	102.04	103.04	0.18136								0	0	0	0.63775	1	43051	43051		0	0	1		+		19110	11757	9216	9255	22146	22146					0.3255455007472392
LLLKKKPPQQ	10	Unmodified	_LLLKKKPPQQ_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8925048708916	2	596.892441	1191.77033	3.2975	0.0019682	-2.4021	-0.0014338	0.89531	0.00053441	596.8909115527888	107.4	0.20821	107.55	107.45	107.66	0.15796					33	10	4	0	0	0	0.89803	1	46173	46173		0.40072	0.050084	1	286970000			19111	2533	9217	9256	22147	22147					0.1821140563326935
LLLKRKVQHLF	11	Unmodified	_LLLKRKVQHLF_					0	0	0			REV__ENST00000433301.5_1_12:110943436-110952922:+|nuORF	REV__ENST00000433301.5_1_12:110943436-110952922:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	349.5626098513603	4	349.48032	1393.89217	1.6227	0.00056711	0.10297	3.5986E-05	1.7257	0.00060309	349.48056770343163	48.44	0.27885	50.417	50.297	50.576	1.9772					10	8	2	0	0	0	0.14606	1	20320	20320		3.0723	2.3746	1	460630	+		19112	13039	9218	9257	22148	22148					0.21098447715644397
LLLLDQPLL	9	Unmodified	_LLLLDQPLL_					0	0	0			REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF	REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5595580935478	3	346.558354	1036.65323	1.5827	0.00054849	1.2096	0.00041919	2.7923	0.00096768	346.5588081740956	64.537	1.6324	66.465	65.263	66.895	1.928					47	21	3	0	0	0	0.8462	1	27107	27107		1.0715	0	1	2702800	+		19113	11495	9219	9258	22149	22149					0.13637247693668542
LLLLDQPLL	9	Unmodified	_LLLLDQPLL_					0	0	0			REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF	REV__ENST00000482704.1_1_2:96689607-96690664:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	346.558354	1036.65323	1.5827	0.00054849	1.2096	0.00041919	2.7923	0.00096768	346.5588081740956	64.537	1.6324	66.465	65.263	66.895	1.928	-0.045801	-0.00045662	NaN	1.0715	47	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2702800	+		19114	11495	9219	9258							0.13637247693668542
LLLLDQRL	8	Unmodified	_LLLLDQRL_					0	0	0			REV__ENSG00000249115|ENST00000203166|HAUS5	REV__ENSG00000249115|ENST00000203166|HAUS5	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3167297244072	2	492.316035	982.617516	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.349	1	54.322	53.822	54.822	1.9722								0	0	0	1.0178	1	21935	21935		26.884	0	1		+		19115	11944	9220	9259	22150	22150					0.12551210236654242
LLLLFRLAVFF	11	Unmodified	_LLLLFRLAVFF_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2904540896416	3	451.288198	1350.84277	3.4321	0.0015488	1.111	0.00050138	4.5431	0.0020502	451.28899704972855	105.82	0.13406	105.99	105.92	106.05	0.16679					21	6	4	0	0	0	1.0402	1	45097	45097		0.094841	0	1	63049000			19116	3827	9221	9260	22151	22151					0.1813773970679904
LLLLFRLAVFF	11	Unmodified	_LLLLFRLAVFF_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	451.288198	1350.84277	1.1514	0.00051961	5.1439	0.0023214	6.2953	0.002841	451.29134916684234	105.9	0.11617	105.9	105.84	105.95	0	-0.054414	0.0041513	NaN	0.094841	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18874000			19117	3827	9221	9260							0.1813773970679904
LLLLFRLAVFF	11	Unmodified	_LLLLFRLAVFF_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	451.288198	1350.84277	3.3043	0.0014912	4.4948	0.0020285	7.7991	0.0035197	451.2912646566005	105.87	0.1217	105.93	105.84	105.96	0.05455	-0.029061	0.0032726	NaN	0.094841	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18733000			19118	3827	9221	9260							0.1813773970679904
LLLLFRLAVFF	11	Unmodified	_LLLLFRLAVFF_					0	0	0		PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant;ENSG00000165282|ENST00000378617|PIGO;ENST00000465745.6_1_9:35090240-35092764:-|nuORF;ENST00000474436.1_1_9:35090976-35092764:-|nuORF	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	PIGO|p.F580Cfs*44|1|0.03|ENSG00000165282|chr9:35092148-35092149|-/GC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	451.288198	1350.84277	3.3622	0.0015173	1.8036	0.00081393	5.1658	0.0023313	451.28931169764246	105.85	0.13348	106.01	105.92	106.06	0.15859	0.049505	-0.00037105	NaN	0.094841	21	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68866000			19119	3827	9221	9260							0.1813773970679904
LLLLLILLST	10	Unmodified	_LLLLLILLST_					0	0	0			REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2615234255791	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.65	1	108.81	108.31	109.31	0.15898								0	0	0	0.66255	1	47025	47025		0.13989	0.13989	1		+		19120	10639	9222	9261	22152	22152					0.21183253312983652
LLLLLILLST	10	Unmodified	_LLLLLILLST_					0	0	0			REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2614929080009	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.75	1	108.91	108.41	109.41	0.15898								0	0	0	0.66255	1	47092	47092		0.13989	0.13989	1		+		19121	10639	9222	9261	22153	22153					0.21183253312983652
LLLLLILLST	10	Unmodified	_LLLLLILLST_					0	0	0			REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2612182497978	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.38	1	108.54	108.04	109.04	0.15627								0	0	0	0.66255	1	46778	46778		0.13989	0.13989	1		+		19122	10639	9222	9261	22154	22154					0.21183253312983652
LLLLLILLST	10	Unmodified	_LLLLLILLST_					0	0	0			REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2616760134697	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.62	1	108.78	108.28	109.28	0.1548								0	0	0	0.66255	1	46936	46936		0.13989	0.13989	1		+		19123	10639	9222	9261	22155	22155					0.21183253312983652
LLLLLILLST	10	Unmodified	_LLLLLILLST_					0	0	0			REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	REV__nc|ENSG00000162365|Q5TCH4-2|CYP4A22	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2611877322197	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.74	1	108.9	108.4	109.4	0.1548								0	0	0	0.66255	1	47016	47016		0.13989	0.13989	1		+		19124	10639	9222	9261	22156	22156					0.21183253312983652
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008666872978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.126	1	15.126	14.626	15.626	0								0	0	0	1.0178	1	6278	6278		0.45834	0	1		+		19125	9263	9223	9262	22157	22157					0.2134334728690419
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.879	1	17.879	17.379	18.379	0								0	0	0	1.0178	1	7425	7425		0.45834	0	1		+		19126	9263	9223	9262	22158	22158					0.2134334728690419
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.91	1	19.91	19.41	20.41	0								0	0	0	1.0178	1	8275	8275		0.45834	0	1		+		19127	9263	9223	9262	22159	22159					0.2134334728690419
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.615	1	68.615	68.115	69.115	0								0	0	0	1.0178	1	28574	28574		0.45834	0	1		+		19128	9263	9223	9262	22160	22160					0.2134334728690419
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.053	1	86.053	85.553	86.553	0								0	0	0	1.0178	1	35854	35854		0.45834	0	1		+		19129	9263	9223	9262	22161	22161					0.2134334728690419
LLLLLKLV	8	Unmodified	_LLLLLKLV_					0	0	0			REV__ENSG00000108829|ENST00000225972|LRRC59	REV__ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998901247978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.551	1	15.681	15.181	16.181	0.13022								0	0	0	1.0178	1	6453	6453		0.45834	0	1		+		19130	9263	9223	9262	22162	22162					0.2134334728690419
LLLLLLFF	8	Unmodified	_LLLLLLFF_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense;chr8:124542058-124543087|91|158.15|0.68|7.87|+|2|TE_info:AluSq10,AluSq10_dup896,Alu,SINE,donor,-,124541902,124542058|None,NDUFB9|1;nc|ENSG00000110148|P32239-3|CCKBR;ENSG00000110148|ENST00000334619|CCKBR;nc|ENSG00000110148|P32239-2|CCKBR	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.2232543826103	3	331.224535	990.651776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.676	1	22.676	22.176	23.176	0								0	0	0	1.0178	1	9440	9440		0	0	1				19131	7608	9224	9263	22163	22163					0.15607658395560975
LLLLLLKV	8	Unmodified	_LLLLLLKV_					0	0	0		ENSG00000170775|ENST00000303921|GPR37	ENSG00000170775|ENST00000303921|GPR37	ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.803	1	19.997	19.497	20.497	0.19342								0	0	0	1.0178	1	8228	8228		0.45834	0	1				19132	4160	9225	9264	22164	22164					0.21343347286892822
LLLLLLLL	8	Unmodified	_LLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;ENST00000268795.5_1_16:68025981-68027124:-|nuORF;ENSG00000143434|ENST00000368914|SEMA6C;ENSG00000178473|ENST00000380433|UCN3;ENST00000565192.1_1_6:31022106-31024293:+|nuORF;nc|ENSG00000143434|Q9H3T2-2|SEMA6C;ENST00000344924.7_1_7:134331590-134346213:+|nuORF;ENST00000530717.1_1_11:369803-372772:+|nuORF;ENSG00000161610|ENST00000293330|HCRT;ENSG00000087116|ENST00000251582|ADAMTS2;ENSG00000182272|ENST00000329962|B4GALNT4;ENST00000418040.5_1_7:134331590-134346220:+|nuORF;ENST00000498308.1_1_7:5111828-5112677:+|nuORF;nc|ENSG00000143434|Q9H3T2-3|SEMA6C;ENSG00000181790|ENST00000517894|ADGRB1;ENST00000396904.2_2_7:5097383-5112677:+|nuORF;ENST00000369603.9_1_10:112063289-112064608:-|nuORF;ENST00000393132.2_1_7:134331590-134343135:+|nuORF;FAT1|p.V2563Sfs*5|1|0.19|ENSG00000083857|chr4:186618896-186618899|TCAC/-|frameshift_variant;ENSG00000159189|ENST00000374640|C1QC;ENSG00000135077|ENST00000307851|HAVCR2;nc|ENSG00000228789|E2RYF7|HCG22;nc|ENSG00000167261|Q9H4A9-3|DPEP2;tr|A0A553SRD1|A0A553SRD1_NIACIBeta-1,6-glucanaseOS=NialliacirculansOX=1397GN=CEQ21_00860PE=3SV=1;nc|ENSG00000167925|Q8N2G8-3|GHDC;ENSG00000121316|ENST00000240617|PLBD1;nc|ENSG00000182685|Q6PL45|BRICD5;nc|ENSG00000167925|Q8N2G8-2|GHDC;nc|ENSG00000283706|Q9UI38|PRSS50;nc|ENSG00000135077|Q8TDQ0-2|HAVCR2;ENSG00000243364|ENST00000368409|EFNA4;ENSG00000183971|ENST00000566435|NPW;ENSG00000165905|ENST00000401752|LARGE2;ENST00000522902.1_1_5:156533605-156536090:-|nuORF;ENSG00000109255|ENST00000264218|NMU;ENSG00000117899|ENST00000261758|MESD;ENSG00000185245|ENST00000329125|GP1BA;ENSG00000167925|ENST00000587427|GHDC;ENSG00000182685|ENST00000328540|BRICD5;nc|ENSG00000087116|O95450-2|ADAMTS2;ENSG00000083857|ENST00000441802|FAT1;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;CON__ENSEMBL:ENSBTAP00000023055;EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;ENSG00000172071|ENST00000303236|EIF2AK3;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;nc|ENSG00000117899|Q14696-2|MESD;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;nc|ENSG00000167261|Q9H4A9-2|DPEP2;ENSG00000167261|ENST00000393847|DPEP2;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1;ENSG00000070031|ENST00000176195|SCT;ENSG00000184709|ENST00000371542|LRRC26;nc|ENSG00000167680|Q9H3T3-3|SEMA6B;ENSG00000167680|ENST00000586582|SEMA6B;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;ENSG00000204962|ENST00000531613|PCDHA8;PCDHA4|p.E422Gfs*17|1|0.51|ENSG00000204967|chr5:140808451-140808452|-/GACCACACTCAATCAATCACTGGTACAATGTGTACCAC|frameshift_variant;nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4;ENSG00000215644|ENST00000400723|GCGR;ENSG00000088812|ENST00000262919|ATRN;nc|ENSG00000088812|O75882-2|ATRN;SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant;ENSG00000184985|ENST00000507866|SORCS2;ENSG00000109743|ENST00000265016|BST1;ENSG00000132518|ENST00000254854|GUCY2D;ENSG00000173714|ENST00000311378|WFIKKN2;ENST00000522399.1_1_1:231090115-231114586:-|nuORF	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;CON__ENSEMBL:ENSBTAP00000023055;EIF2AK3|p.S455Mfs*65|1|0.04|ENSG00000172071|chr2:88588029-88588047|TGAGAAAACTTATCATTAC/-|frameshift_variant;REV__ENSG00000132518|ENST00000254854|GUCY2D;nc|ENSG00000054654|Q8WXH0|SYNE2;nc|ENSG00000117899|Q14696-2|MESD;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF;REV__ENSG00000182272|ENST00000329962|B4GALNT4;nc|ENSG00000167680|Q9H3T3-3|SEMA6B;nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;REV__FAT1|p.V2563Sfs*5|1|0.19|ENSG00000083857|chr4:186618896-186618899|TCAC/-|frameshift_variant;ENSG00000215644|ENST00000400723|GCGR;ENSG00000088812|ENST00000262919|ATRN;SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant;ENSG00000109743|ENST00000265016|BST1;ENSG00000132518|ENST00000254854|GUCY2D;ENSG00000173714|ENST00000311378|WFIKKN2;ENST00000522399.1_1_1:231090115-231114586:-|nuORF;REV__SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1476928591728	2	462.348815	922.683077	3.4037	0.0015737	2.5906	0.0011978	5.9943	0.0027715	462.3490146253998	102.07	0.11879	102.13	102.07	102.19	0.062805					5	3	2	0	0	0	2.3239	1	42714	42714		0	0	1	546140		+	19133	3015;716;6068;8200;5352;5349;1870;455;1493;9280;8632;147;11931;12929;5169;11929;11443;10627;10392;9924;9680;5258;4722;9427;12416;2230;8477;7995;5132;4728;4072;2643;2395;1897;774;426;328;4298;2537;1676;1109;11346;8836;9848;3985;7092;7857;443;11438	9226	9265	22165	22165					0.21864231429651682
LLLLLLLLAT	10	Unmodified	_LLLLLLLLAT_					0	0	0		nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3958007693291	2	548.391211	1094.76787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.45	1	106.6	106.1	107.1	0.15781								0	0	0	0.66176	1	45586	45586		1.4819	0	1				19134	7995	9227	9266	22166	22166					0.2242755717561522
LLLLLLLLAT	10	Unmodified	_LLLLLLLLAT_					0	0	0		nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3956176638603	2	548.391211	1094.76787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.58	1	106.74	106.24	107.24	0.15781								0	0	0	0.6624	1	45675	45675		0.40072	0	1				19135	7995	9227	9266	22167	22167					0.2242755717561522
LLLLLLLLAT	10	Unmodified	_LLLLLLLLAT_					0	0	0		nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3951293826103	2	548.391211	1094.76787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.68	1	106.84	106.34	107.34	0.15781								0	0	0	0.6624	1	45740	45740		0.40072	0	1				19136	7995	9227	9266	22168	22168					0.2242755717561522
LLLLLLLLAT	10	Unmodified	_LLLLLLLLAT_					0	0	0		nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	nc|ENSG00000213402|Q14761|PTPRCAP	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3948242068291	2	548.391211	1094.76787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.17	1	107.32	106.82	107.82	0.15781								0	0	0	0.6624	1	46027	46027		0.40072	0	1				19137	7995	9227	9266	22169	22169					0.2242755717561522
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8897582888603	2	518.890847	1035.76714	1.4609	0.00075804	-3.6944	-0.001917	-2.2336	-0.001159	518.8906255105951	108.69	0.8196	108.69	108.48	109.3	0					52	38	2	0	0	0	0.85403	1	46758	46758		0	0	1	12459000		+	19138	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22170	22170					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8903076052666	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.88	1	105.88	105.38	106.38	0								0	0	0	0.42693	1	45050	45050		0	0	1			+	19139	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22171	22171					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8900024294853	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.99	1	105.99	105.49	106.49	0								0	0	0	0.42693	1	45125	45125		0	0	1			+	19140	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22172	22172					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8905517458916	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.09	1	106.09	105.59	106.59	0								0	0	0	0.42693	1	45187	45187		0	0	1			+	19141	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22173	22173					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8904296755791	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.19	1	106.19	105.69	106.69	0								0	0	0	0.42693	1	45250	45250		0	0	1			+	19142	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22174	22174					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8911620974541	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.38	1	106.38	105.88	106.88	0								0	0	0	0.42693	1	45379	45379		0	0	1			+	19143	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22175	22175					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8902465701103	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.61	1	106.61	106.11	107.11	0								0	0	0	0.42693	1	45512	45512		0	0	1			+	19144	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22176	22176					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8900634646416	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.72	1	106.72	106.22	107.22	0								0	0	0	0.42693	1	45587	45587		0	0	1			+	19145	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22177	22177					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8898803591728	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.92	1	106.92	106.42	107.42	0								0	0	0	0.42693	1	45717	45717		0	0	1			+	19146	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22178	22178					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8904296755791	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.23	1	107.23	106.73	107.73	0								0	0	0	0.42693	1	45915	45915		0	0	1			+	19147	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22179	22179					0.25068762526552746
LLLLLLLLL	9	Unmodified	_LLLLLLLLL_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF;nc|ENSG00000283654|A0A1B0GTW7-3|CIROP;nc|ENSG00000054654|Q8WXH0-5|SYNE2;ENSG00000131042|ENST00000314446|LILRB2;nc|ENSG00000131042|Q8N423-1|LILRB2;nc|ENSG00000155093|Q92932-2|PTPRN2;ENSG00000125810|ENST00000246006|CD93;nc|ENSG00000054654|Q8WXH0-10|SYNE2;ENSG00000083807|ENST00000263093|SLC27A5;nc|ENSG00000054654|Q8WXH0-12|SYNE2;nc|ENSG00000083807|Q9Y2P5-2|SLC27A5;ENSG00000283654|ENST00000637218|CIROP;nc|ENSG00000124508|Q8WVV5-4|BTN2A2;nc|ENSG00000054654|Q8WXH0-6|SYNE2;nc|ENSG00000054654|Q8WXH0-11|SYNE2;nc|ENSG00000131042|Q8N423-3|LILRB2;PTPRN2|p.P488Hfs*30|1|0.11|ENSG00000155093|chr7:158133770-158133771|-/AAGGT|frameshift_variant;nc|ENSG00000157193|Q14114-2|LRP8;ENSG00000182578|ENST00000675795|CSF1R;ENSG00000155093|ENST00000389418|PTPRN2;nc|ENSG00000054654|Q8WXH0-13|SYNE2;nc|ENSG00000168056|Q9NS15-2|LTBP3;ENSG00000168056|ENST00000301873|LTBP3;FREM2|p.E2213Vfs*37|1|0.04|ENSG00000150893|chr13:38851003-38851004|-/TGTTCTTCACGTCAGGAAATTCTGAA|frameshift_variant;nc|ENSG00000150893|Q5SZK8-2|FREM2;ENSG00000150893|ENST00000280481|FREM2;ENSG00000157193|ENST00000306052|LRP8;nc|ENSG00000283654|A0A1B0GTW7-2|CIROP;nc|ENSG00000054654|Q8WXH0-4|SYNE2;ENST00000554805.6_2_14:64676062-64692241:+|nuORF;nc|ENSG00000149451|Q9BZ11-2|ADAM33;chr13:113297495-113306509|92|19.79|0.33|5.91|+|2|LAMP1,None|1;nc|ENSG00000157193|Q14114-3|LRP8;nc|ENSG00000157193|Q14114-4|LRP8;ENSG00000149451|ENST00000356518|ADAM33;ENST00000555022.5_2_14:64671104-64692241:+|nuORF;nc|ENSG00000054654|Q8WXH0-3|SYNE2;nc|ENSG00000155093|Q92932-4|PTPRN2;nc|ENSG00000131042|Q8N423-4|LILRB2;nc|ENSG00000204301|Q99466-3|NOTCH4;ENSG00000184992|ENST00000341446|BRI3BP;ENST00000536100.1_1_12:133182714-133186967:-|nuORF;ENST00000395811.9_1_17:17088208-17088493:+|nuORF;CELSR2|p.L216Rfs*9|1|0.65|ENSG00000143126|chr1:109250726-109250727|TG/-|frameshift_variant;ENST00000467485.5_1_6:26384034-26390495:+|nuORF;ENST00000462628.5_1_19:55146093-55147330:+|nuORF;ENSG00000204583|ENST00000376608|LRCOL1;ENSG00000161921|ENST00000293778|CXCL16;ENST00000293778.10_2_17:4636851-4637124:-|nuORF;ENSG00000142538|ENST00000270631|PTH2;ENST00000529734.5_1_11:46105847-46142581:-|nuORF;nc|ENSG00000124508|Q8WVV5-5|BTN2A2;ENST00000530312.1_1_11:46142070-46142581:-|nuORF;ENST00000323180.10_1_11:46105825-46142581:-|nuORF;ENST00000413911.1_1_2:191745560-191746172:-|nuORF;ENST00000476805.2_1_2:64977750-64977942:-|nuORF;ENST00000532883.5_1_11:46112101-46142581:-|nuORF;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;ENSG00000064601|ENST00000646241|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF;nc|ENSG00000213402|Q14761|PTPRCAP;nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1	nc|ENSG00000124508|Q8WVV5-2|BTN2A2;CELSR2-KIAA1324|1|fusion;ENSG00000143126|ENST00000271332|CELSR2;REV__CELSR2-KIAA1324|1|fusion;nc|ENSG00000054654|Q8WXH0|SYNE2;DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000064601|P10619-2|CTSA;nc|ENSG00000104972|Q8NHL6|LILRB1;ENSG00000114554|ENST00000393409|PLXNA1;nc|ENSG00000115155|Q9HC10-4|OTOF;SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;ENSG00000134917|ENST00000257359|ADAMTS8;ENSG00000169174|ENST00000302118|PCSK9;nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000204301|ENST00000375023|NOTCH4;nc|ENSG00000290691|A6NGW2|STRCP1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000001036|Q9BTY2-2|FUCA2;nc|ENSG00000213402|Q14761|PTPRCAP;REV__ENSG00000001036|ENST00000002165|FUCA2;REV__nc|ENSG00000054654|Q8WXH0|SYNE2;REV__ENSG00000109758|ENST00000382774|HGFAC;REV__nc|ENSG00000115155|Q9HC10-4|OTOF;REV__ENSG00000125810|ENST00000246006|CD93;REV__ENSG00000134917|ENST00000257359|ADAMTS8;REV__ENSG00000150893|ENST00000280481|FREM2;REV__ENSG00000161921|ENST00000293778|CXCL16;REV__ENSG00000185033|ENST00000411539|SEMA4B;REV__nc|ENSG00000290691|A6NGW2|STRCP1;REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF;REV__ENST00000413911.1_1_2:191745560-191746172:-|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8904296755791	2	518.890847	1035.76714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.33	1	107.33	106.83	107.83	0								0	0	0	0.42693	1	45979	45979		0.6015	0	1			+	19148	3015;716;5349;5352;6068;455;1870;8200;1493;9280;147;8632;11929;11443;10627;10392;9924;9680;9427;11931;2230;7995;12416;5132;4728;4072;2643;2395;1897;774;426;8477;12929	9228	9267	22180	22180					0.25068762526552746
LLLLLLPAAA	10	Unmodified	_LLLLLLPAAA_					0	0	0			REV__nc|ENSG00000143590|P52797-2|EFNA3	REV__nc|ENSG00000143590|P52797-2|EFNA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	336.5664550662041	3	336.566961	1006.67905	0.17997	6.0571E-05	-1.0083	-0.00033936	-0.82832	-0.00027879	336.56645469876344	22.287	0.29925	22.51	22.374	22.674	0.223					20	9	3	0	0	0	0.89803	1	9273	9273		0.77653	0	1	4724800	+		19149	10217	9229	9268	22181	22181					0.17598141935923195
LLLLLLPAAA	10	Unmodified	_LLLLLLPAAA_					0	0	0			REV__nc|ENSG00000143590|P52797-2|EFNA3	REV__nc|ENSG00000143590|P52797-2|EFNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.5666992068291	3	336.566961	1006.67905	-0.2682	-9.0268E-05	-0.69012	-0.00023227	-0.95832	-0.00032254	336.56673013716625	21.252	0.26968	22.378	22.276	22.545	1.1254					19	8	3	0	0	0	0.89803	1	8864	8864		0.77653	0	1	2902900	+		19150	10217	9229	9268	22182	22182					0.17598141935923195
LLLLLLPAAA	10	Unmodified	_LLLLLLPAAA_					0	0	0			REV__nc|ENSG00000143590|P52797-2|EFNA3	REV__nc|ENSG00000143590|P52797-2|EFNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.5669433474541	3	336.566961	1006.67905	-0.076441	-2.5728E-05	-1.547	-0.00052065	-1.6234	-0.00054638	336.5666609156685	20.818	0.32467	22.393	22.234	22.559	1.5748					26	10	3	0	0	0	0.89803	1	8689	8689		0.77653	0	1	4398500	+		19151	10217	9229	9268	22183	22183					0.17598141935923195
LLLLLLPG	8	Unmodified	_LLLLLLPG_					0	0	0		ENSG00000114554|ENST00000393409|PLXNA1;chr19:13938006-13953119|385|21.02|0.96|4.46|-|ENST00000585607|PODNL1,PODNL1;ENST00000586075.1_2_19:14044750-14048885:-|nuORF;ENST00000254320.7_1_19:14044750-14048840:-|nuORF;nc|ENSG00000132000|Q6PEZ8-2|PODNL1;nc|ENSG00000132000|Q6PEZ8-3|PODNL1;nc|ENSG00000132000|Q6PEZ8|PODNL1;ENSG00000132000|ENST00000588872|PODNL1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.3011352419853	2	426.301865	850.589176	1.8314	0.00078073	-0.89407	-0.00038114	0.93734	0.00039959	426.301147246858	71.047	0.28723	71.37	71.207	71.494	0.32359					18	8	3	0	0	0	0.88409	1	29714	29714		6.3541	0	1	1165600			19152	1870;5352;844	9230	9269	22184	22184					0.15790512327373563
LLLLLLPG	8	Unmodified	_LLLLLLPG_					0	0	0		ENSG00000114554|ENST00000393409|PLXNA1;chr19:13938006-13953119|385|21.02|0.96|4.46|-|ENST00000585607|PODNL1,PODNL1;ENST00000586075.1_2_19:14044750-14048885:-|nuORF;ENST00000254320.7_1_19:14044750-14048840:-|nuORF;nc|ENSG00000132000|Q6PEZ8-2|PODNL1;nc|ENSG00000132000|Q6PEZ8-3|PODNL1;nc|ENSG00000132000|Q6PEZ8|PODNL1;ENSG00000132000|ENST00000588872|PODNL1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.3025390505791	2	426.301865	850.589176	2.8989	0.0012358	-1.2602	-0.00053724	1.6386	0.00069855	426.30134597164607	70.195	0.34573	71.549	71.366	71.712	1.3536					21	10	3	0	0	0	0.88409	1	29478	29478		6.3541	0	1	1286900			19153	1870;5352;844	9230	9269	22185	22185					0.15790512327373563
LLLLLLPG	8	Unmodified	_LLLLLLPG_					0	0	0		ENSG00000114554|ENST00000393409|PLXNA1;chr19:13938006-13953119|385|21.02|0.96|4.46|-|ENST00000585607|PODNL1,PODNL1;ENST00000586075.1_2_19:14044750-14048885:-|nuORF;ENST00000254320.7_1_19:14044750-14048840:-|nuORF;nc|ENSG00000132000|Q6PEZ8-2|PODNL1;nc|ENSG00000132000|Q6PEZ8-3|PODNL1;nc|ENSG00000132000|Q6PEZ8|PODNL1;ENSG00000132000|ENST00000588872|PODNL1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	426.3021118044853	2	426.301865	850.589176	2.7828	0.0011863	-2.1222	-0.00090471	0.66055	0.00028159	426.30100143530325	69.897	0.35199	71.735	71.562	71.914	1.8378					21	10	3	0	0	0	0.88409	2	29297	29297;29348		6.3541	0	1	1529700			19154	1870;5352;844	9230	9269	22186;22187	22186					0.15790512327373563
LLLLLLVLL	9	Unmodified	_LLLLLLVLL_					0	0	0		ENSG00000164715|ENST00000297293|LMTK2;ENST00000483836.1_1_22:50500014-50511179:-|nuORF;nc|ENSG00000100427|Q15049-2|MLC1;nc|ENSG00000196188|P14091-2|CTSE;ENSG00000100427|ENST00000311597|MLC1;ENSG00000196188|ENST00000358184|CTSE;nc|ENSG00000196188|P14091-3|CTSE	ENSG00000164715|ENST00000297293|LMTK2	ENSG00000164715|ENST00000297293|LMTK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.8824340701103	2	511.883022	1021.75149	2.9054	0.0014872	-2.5221	-0.001291	0.38331	0.00019621	511.881054993671	108.72	0.69286	108.77	108.55	109.25	0.050644					60	31	2	0	0	0	0.85403	1	46812	46812		0	0	1	9746300			19155	3794	9231	9270	22188	22188					0.241484760094977
LLLLLPLPVP	10	Unmodified	_LLLLLPLPVP_					0	0	0		ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2560912966728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.76	1	100.94	100.44	101.44	0.18047								0	0	0	0.66254	1	42399	42399		0.15932	0.15932	1				19156	4552	9232	9271	22189	22189					0.2017528800411128
LLLLLPLPVP	10	Unmodified	_LLLLLPLPVP_					0	0	0		ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	ENSG00000180644|ENST00000441259|PRF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2553588747978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.49	1	101.66	101.16	102.16	0.17032								0	0	0	0.66254	1	42706	42706		0.15932	0	1				19157	4552	9232	9271	22190	22190					0.2017528800411128
LLLLLPPPLV	10	Unmodified	_LLLLLPPPLV_					0	0	0			REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.885	1	49.216	48.716	49.716	0.33034								0	0	0	0.66254	1	20494	20494		0.15932	0	1		+		19158	12671	9233	9272	22191	22191					0.2017528800411128
LLLLLPPPLV	10	Unmodified	_LLLLLPPPLV_					0	0	0			REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.694	1	49.67	49.17	50.17	1.976								0	0	0	0.66254	1	19975	19975		0.15932	0	1		+		19159	12671	9233	9272	22192	22192					0.2017528800411128
LLLLLPPPLV	10	Unmodified	_LLLLLPPPLV_					0	0	0			REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	REV__ENST00000371558.6_1_X:118708567-118708919:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.851	1	49.827	49.327	50.327	1.976								0	0	0	0.66254	1	20041	20041		0.15932	0	1		+		19160	12671	9233	9272	22193	22193					0.2017528800411128
LLLLMFVG	8	Unmodified	_LLLLMFVG_					0	0	0		tr|A0A7D6VTC2|A0A7D6VTC2_9CLOTTrkHfamilypotassiumuptakeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16710PE=3SV=1	tr|A0A7D6VTC2|A0A7D6VTC2_9CLOTTrkHfamilypotassiumuptakeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16710PE=3SV=1	tr|A0A7D6VTC2|A0A7D6VTC2_9CLOTTrkHfamilypotassiumuptakeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16710PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	453.2811462283134	2	453.280075	904.545597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.61	1	39.43	38.93	39.93	1.8202								0	0	0	1.0178	1	15776	15776		2.8892	0	1				19161	16913	9234	9273	22194	22194					0.08950579558586469
LLLLNCHL	8	Unmodified	_LLLLNCHL_					0	0	0		ENST00000357681.9_1_1:203709714-203709879:+|nuORF	ENST00000357681.9_1_1:203709714-203709879:+|nuORF	ENST00000357681.9_1_1:203709714-203709879:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.7782165408134	2	469.778231	937.541908	2.2861	0.001074	-1.4673	-0.00068932	0.81878	0.00038464	469.7774170268257	76.325	0.51927	76.325	76.041	76.561	0					43	16	3	0	0	0	0.88409	1	31793	31793		6.3541	0	1	15131000			19162	6001	9235	9274	22195	22195					0.07063909784733369
LLLLPGLL	8	Unmodified	_LLLLPGLL_					0	0	0		tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1;ENST00000321725.10_1_3:52549009-52550096:+|nuORF	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.3024169802666	2	426.301865	850.589176	0.85328	0.00036376	0.409	0.00017436	1.2623	0.00053812	426.3022492026292	71.272	0.31644	71.272	71.067	71.383	0					14	9	2	0	0	0	0.88409	1	29678	29678		6.3541	0	1	949590			19163	16053	9236	9275	22196	22196					0.1579051232738493
LLLLPGLL	8	Unmodified	_LLLLPGLL_					0	0	0		tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1;ENST00000321725.10_1_3:52549009-52550096:+|nuORF	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	tr|A0A553SFE7|A0A553SFE7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08725PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.3014709353447	2	426.301865	850.589176	1.8314	0.00078073	-0.89407	-0.00038114	0.93734	0.00039959	426.301147246858	71.047	0.28723	71.37	71.207	71.494	0.32359					18	8	3	0	0	0	0.87655	1	29762	29762		11.114	0	1	1165600			19164	16053	9236	9275	22197	22197					0.1579051232738493
LLLLPLLGK	9	Unmodified	_LLLLPLLGK_					0	0	0		RET|p.L1027Rfs*12|1|0.07|ENSG00000165731|chr10:43126612-43126613|-/CAGGAGTCCTGGGAGCTCTATGCAG|frameshift_variant;nc|ENSG00000165731|P07949-2|RET;ENSG00000165731|ENST00000355710|RET;RET|p.F555Rfs*50|1|0.3|ENSG00000165731|chr10:43112866-43112867|-/AGAA|frameshift_variant	RET|p.L1027Rfs*12|1|0.07|ENSG00000165731|chr10:43126612-43126613|-/CAGGAGTCCTGGGAGCTCTATGCAG|frameshift_variant	RET|p.L1027Rfs*12|1|0.07|ENSG00000165731|chr10:43126612-43126613|-/CAGGAGTCCTGGGAGCTCTATGCAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	327.0077392458916	3	327.235323	978.684139	-1.1247	-0.00036803	1.6257	0.00053198	0.50103	0.00016395	327.23561476425016	14.85	0.15561	15.62	15.55	15.705	0.76937					6	4	2	0	0	0	0.11957	1	6160	6160		0	0	1	113520			19165	3854	9237	9276	22198	22198					0.19394445798582183
LLLLPSIH	8	Unmodified	_LLLLPSIH_					0	0	0		ENST00000575534.1_1_17:4578567-4578798:-|nuORF;ENST00000573523.5_1_17:4574736-4578861:-|nuORF;PELP1-CAMTA2|3|fusion;PELP1-CAMTA2|1|fusion;PELP1-CAMTA2|2|fusion;ENSG00000141456|ENST00000572293|PELP1	ENST00000575534.1_1_17:4578567-4578798:-|nuORF	ENST00000575534.1_1_17:4578567-4578798:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	453.2960082888603	2	453.294571	904.574589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.09	103.59	104.59	0.059502								0	0	0	1.0178	1	43793	43793		0.69038	0	1				19166	2961	9238	9277	22199	22199					0.11848440179244335
LLLLRLDVPRL	11	Unmodified	_LLLLRLDVPRL_					0	0	0			REV__ENST00000392432.6_1_3:194349154-194354092:-|nuORF	REV__ENST00000392432.6_1_3:194349154-194354092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2240478396416	4	330.973599	1319.86529	0.12312	4.0749E-05	-1.7717	-0.00058639	-1.6486	-0.00054564	331.22354703715115	22.295	1.1264	22.518	21.992	23.119	0.223					50	37	2	0	0	0	1.0391	1	9292	9292		0.40827	0.32491	1	1957000	+		19167	12797	9239	9278	22200	22200					0.21815339104432496
LLLLRSRVLI	10	Unmodified	_LLLLRSRVLI_					0	0	0			REV__ENSG00000181789|ENST00000314797|COPG1	REV__ENSG00000181789|ENST00000314797|COPG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	598.4162475466728	2	598.416083	1194.81761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.497	1	54.897	54.397	55.397	1.4005								0	0	0	0.65703	1	22389	22389		7.9102	0	1		+		19168	11332	9240	9279	22201	22201					0.2279968490427109
LLLLVAIPLL	10	Unmodified	_LLLLVAIPLL_					0	0	0		ENSG00000186897|ENST00000334221|C1QL4	ENSG00000186897|ENST00000334221|C1QL4	ENSG00000186897|ENST00000334221|C1QL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3866454958916	2	539.385929	1076.7573	2.1613	0.0011658	-0.92187	-0.00049725	1.2394	0.00066853	539.3855998472358	81.867	0.21565	82.147	82.059	82.274	0.2802					11	6	2	0	0	0	0.84024	1	34237	34237		7.9102	0	1	645500			19169	4809	9241	9280	22202	22202					0.22199574521164323
LLLLVKKIPFH	11	Unmodified	_LLLLVKKIPFH_					0	0	0			REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	330.4708740115166	4	330.974605	1319.86931	0.3737	0.00012369	-2.4366	-0.00080646	-2.0629	-0.00068277	331.2248827014445	48.286	0.28277	49.674	49.521	49.804	1.388					15	8	2	0	0	0	0.14606	1	20191	20191		0.45452	0.45452	1	812970	+		19170	9731	9242	9281	22203	22203					0.22217428598173683
LLLLWSGH	8	Unmodified	_LLLLWSGH_					0	0	0		ENST00000433058.1_1_1:225636110-225652972:-|nuORF	ENST00000433058.1_1_1:225636110-225652972:-|nuORF	ENST00000433058.1_1_1:225636110-225652972:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.7797729372978	2	469.776545	937.538538	3.0142	0.001416	1.1865	0.00055738	4.2007	0.0019734	469.7769894371031	76.172	0.51747	76.493	76.176	76.694	0.32163					41	16	3	0	0	0	0.88958	1	31920	31920		2.8892	0	1	27676000			19171	6510	9243	9282	22204	22204					0.06726983002386078
LLLMGKPG	8	Unmodified	_LLLMGKPG_					0	0	0		nc|ENSG00000197312|Q5TDH0-3|DDI2	nc|ENSG00000197312|Q5TDH0-3|DDI2	nc|ENSG00000197312|Q5TDH0-3|DDI2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	414.2541992068291	2	414.754224	827.493896	2.975	0.0012339	2.0669	0.00085727	5.042	0.0020912	414.7554347064385	103.98	0.055466	104.04	104.01	104.07	0.059502					4	2	2	0	0	0	2.3239	1	43768	43768		0	0	1	5559600			19172	7962	9244	9283	22205	22205					0.07324835864699253
LLLMSLLFP	9	Unmodified	_LLLMSLLFP_					0	0	0			REV__ENST00000607947.1_1_20:1340372-1341782:+|nuORF	REV__ENST00000607947.1_1_20:1340372-1341782:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8220092654228	2	523.819564	1045.62458	2.162	0.0011325	1.2139	0.00063584	3.3758	0.0017683	523.8201995284138	81.044	0.98591	81.044	80.541	81.527	0					69	31	3	0	0	0	0.82604	1	33842	33842		2.3027	0	1	1898400	+		19173	14146	9245	9284	22206	22206					0.10358806792896758
LLLMVKKEP	9	Unmodified	_LLLMVKKEP_					0	0	0			REV__ENSG00000132669|ENST00000255006|RIN2	REV__ENSG00000132669|ENST00000255006|RIN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.8351318240166	2	535.835746	1069.65694	1.7699	0.00094837	-3.8951	-0.0020872	-2.1253	-0.0011388	535.8340351962955	76.359	0.21294	76.359	76.284	76.497	0					12	6	2	0	0	0	0.37357	1	31807	31807		21.747	1.293	1	1090700	+		19174	9853	9246	9285	22207	22207					0.12489594195881182
LLLNHLTTI	9	Unmodified	_LLLNHLTTI_					0	0	0			REV__ENSG00000173801|ENST00000393931|JUP	REV__ENSG00000173801|ENST00000393931|JUP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3262817263603	2	519.321317	1036.62808	2.6348	0.0013683	-3.0178	-0.0015672	-0.38296	-0.00019888	519.3200451476984	77.749	1.0837	79.03	78.474	79.557	1.2809					57	34	3	0	0	0	0.66839	1	32548	32548		8.5933	0	1	10294000	+		19175	10893	9247	9286	22208	22208					0.11123192891068356
LLLNRAVSV	9	Unmodified	_LLLNRAVSV_					0	0	0			REV__CON__P50448	REV__CON__P50448	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.8144103884697	2	492.813659	983.612765	2.4381	0.0012015	-2.2457	-0.0011067	0.19238	9.481E-05	492.8126263566233	45.261	0.37824	45.588	45.374	45.752	0.32674					15	12	2	0	0	0	0.46905	1	19017	19017		16.942	1.0951	1	340530	+	+	19176	8383	9248	9287	22209	22209					0.12030326093895383
LLLNRAVSV	9	Unmodified	_LLLNRAVSV_					0	0	0			REV__CON__P50448	REV__CON__P50448	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.8136474490166	2	492.813659	983.612765	2.0677	0.001019	-1.5339	-0.00075593	0.53378	0.00026305	492.81278903325034	43.111	0.30246	45.032	44.84	45.142	1.9211					12	9	2	0	0	0	0.27148	1	18071	18071		26.884	2.2098	1	1194200	+	+	19177	8383	9248	9287	22210	22210					0.12030326093895383
LLLNRAVSV	9	Unmodified	_LLLNRAVSV_					0	0	0			REV__CON__P50448	REV__CON__P50448	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	492.813659	983.612765	2.4381	0.0012015	-2.2457	-0.0011067	0.19238	9.481E-05	492.8126263566233	45.261	0.37824	45.588	45.374	45.752	0.32674	0	0	NaN	16.942	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	340530	+	+	19178	8383	9248	9287							0.12030326093895383
LLLNRAVSV	9	Unmodified	_LLLNRAVSV_					0	0	0			REV__CON__P50448	REV__CON__P50448	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	492.813659	983.612765	2.0475	0.001009	-1.2376	-0.0006099	0.80987	0.00039912	492.813119576853	43.74	0.24438	45.094	44.947	45.191	1.3536	0.030853	0.00018366	NaN	26.884	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1276800	+	+	19179	8383	9248	9287							0.12030326093895383
LLLPAVPVGA	10	Unmodified	_LLLPAVPVGA_					0	0	0		ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	949.6089965701103	1	949.60808	948.600803	1.8054	0.0017144	-0.80615	-0.00076553	0.9992	0.00094884	949.607584906089	75.123	0.37712	75.123	74.934	75.311	0					24	11	3	0	0	0	0.12362	2	31254	31254;31307		59.795	27.678	1	1891200			19180	3627	9249	9288	22211;22212	22211					0.12444709350711491
LLLPAVPVGA	10	Unmodified	_LLLPAVPVGA_					0	0	0		ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	949.6090576052666	1	949.60808	948.600803	2.6671	0.0025327	-1.0048	-0.00095421	1.6622	0.0015785	949.6068465025376	74.642	0.4037	74.967	74.74	75.143	0.32464					30	12	3	0	0	0	0.069028	2	31232	31182;31232		70.865	30.416	1	2289700			19181	3627	9249	9288	22213;22214	22214					0.12444709350711491
LLLPAVPVGA	10	Unmodified	_LLLPAVPVGA_					0	0	0		ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	949.6104614138603	1	949.60808	948.600803	2.9735	0.0028236	-0.12323	-0.00011702	2.8502	0.0027066	949.6077130646247	73.643	0.43797	74.961	74.716	75.154	1.318					29	13	3	0	0	0	0.069028	2	30870	30870;30917		70.865	21.196	1	6503300			19182	3627	9249	9288	22215;22216	22215					0.12444709350711491
LLLPAVPVGA	10	Unmodified	_LLLPAVPVGA_					0	0	0		ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	949.6098510622978	1	949.60808	948.600803	2.8346	0.0026918	-1.3621	-0.0012935	1.4725	0.0013983	949.6070500522064	73.132	0.47394	74.942	74.703	75.177	1.8101					32	14	3	0	0	0	0.044527	2	30680	30633;30680		82.939	26.398	1	6132200			19183	3627	9249	9288	22217;22218	22218					0.12444709350711491
LLLPDYYLVTV	11	Unmodified	_LLLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	655.3815795779228	2	654.876122	1307.73769	1.9023	0.0012458	0.94192	0.00061684	2.8443	0.0018626	654.8768293520235	95.818	0.19926	95.818	95.692	95.891	0					21	6	4	0	0	0	0.098753	1	40033	40033		56.177	31.186	1	6381200			19184	4985	9250	9289	22219	22219					0.09613153719737966
LLLPDYYLVTV	11	Unmodified	_LLLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	654.8818847537041	2	654.876122	1307.73769	2.6231	0.0017178	2.9061	0.0019031	5.5292	0.0036209	654.8789521683224	95.541	0.27248	95.664	95.559	95.831	0.12331					22	8	4	0	0	0	0.03513	2	39974	39974;40031		74.929	36.955	1	3261100			19185	4985	9250	9289	22220;22221	22220					0.09613153719737966
LLLPDYYLVTV	11	Unmodified	_LLLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.8798095583916	2	654.876122	1307.73769	3.872	0.0025357	1.0454	0.00068461	4.9174	0.0032203	654.8765010561904	94.887	0.33692	95.628	95.487	95.824	0.74124					30	11	3	0	0	0	0.02806	2	39928	39888;39928		81.89	43.916	1	11611000			19186	4985	9250	9289	22222;22223	22223					0.09613153719737966
LLLPDYYLVTV	11	Unmodified	_LLLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.8778564333916	2	654.876122	1307.73769	3.238	0.0021205	-0.059475	-3.8949E-05	3.1785	0.0020816	654.8759247685485	94.482	0.39931	95.671	95.464	95.864	1.1887					37	12	4	0	0	0	0.098753	3	39749	39703;39749;39790		56.177	22.732	1	6454800			19187	4985	9250	9289	22224;22225;22226	22225					0.09613153719737966
LLLPEDYF	8	Unmodified	_LLLPEDYF_					0	0	0		ENST00000573186.5_3_17:7219444-7222432:-|nuORF;nc|ENSG00000215041|Q96JN8-2|NEURL4;ENSG00000215041|ENST00000399464|NEURL4	ENST00000573186.5_3_17:7219444-7222432:-|nuORF	ENST00000573186.5_3_17:7219444-7222432:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.1798583865166	3	337.179543	1008.5168	0.69534	0.00023445	1.3049	0.00043999	2.0003	0.00067445	337.18014877669236	69.147	0.36029	70.513	70.284	70.645	1.3657					29	11	3	0	0	0	0.73597	1	28972	28972		26.884	0	1	3749800			19188	5252	9251	9290	22227	22227					0.012881334631401842
LLLPFLPLL	9	Unmodified	_LLLPFLPLL_					0	0	0		ENST00000493548.5_1_6:32122153-32123690:+|nuORF;nc|ENSG00000258388|Q9UMR5-2|PPT2;ENSG00000221988|ENST00000324816|PPT2;nc|ENSG00000258388|Q9UMR5-3|PPT2	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.8514282107353	2	519.851722	1037.68889	3.3139	0.0017228	-2.7409	-0.0014249	0.57306	0.00029791	519.8496130502782	101.03	0.083557	101.21	101.17	101.25	0.18047					4	2	2	0	0	0	0.026036	1	42517	42517		93.763	13.828	1	4175100			19189	5278	9252	9291	22228	22228					0.17155329941329
LLLPFLPLL	9	Unmodified	_LLLPFLPLL_					0	0	0		ENST00000493548.5_1_6:32122153-32123690:+|nuORF;nc|ENSG00000258388|Q9UMR5-2|PPT2;ENSG00000221988|ENST00000324816|PPT2;nc|ENSG00000258388|Q9UMR5-3|PPT2	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.851722	1037.68889	3.2929	0.0017118	-4.2867	-0.0022285	-0.99382	-0.00051664	519.8504639729928	100.98	0.08181	101.19	101.12	101.2	0.20527	-0.011039	-0.0010309	NaN	93.763	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1107100			19190	5278	9252	9291							0.17155329941329
LLLPFWDR	8	Unmodified	_LLLPFWDR_					0	0	0			REV__ENST00000484592.5_1_7:134134339-134143844:-|nuORF	REV__ENST00000484592.5_1_7:134134339-134143844:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	529.8018066287041	2	530.302927	1058.5913	2.0342	0.0010787	-4.1877	-0.0022208	-2.1535	-0.001142	530.3018880599575	64.048	0.16087	64.377	64.273	64.434	0.32899					6	4	2	0	0	0	2.3239	1	26849	26849		8.5933	0.68312	1	274430	+		19191	13384	9253	9292	22229	22229					0.0643494106518574
LLLPGELAK	9	Unmodified	_LLLPGELAK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;nc|ENSG00000285480|A0A2R8Y619|H2BK1;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;HIST1H2BK|p.H110N|1|0.32|ENSG00000197903|chr6:27146471-27146471|G/T|missense_variant	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.3062621951103	2	477.305136	952.595718	2.7444	0.0013099	0.046704	2.2292E-05	2.7911	0.0013322	477.30525382441016	44.696	0.46994	46.061	45.804	46.274	1.3653					26	14	2	0	0	0	0.12216	1	18728	18728		41.956	1.9982	1	8386500			19192	3500	9254	9293	22230	22230					0.11752405488095974
LLLPGELAK	9	Unmodified	_LLLPGELAK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000369385.5_1_1:149814898-149814982:+|nuORF;nc|ENSG00000285480|A0A2R8Y619|H2BK1;ENST00000436555.1_1_1:228651916-228652012:-|nuORF;HIST1H2BK|p.H110N|1|0.32|ENSG00000197903|chr6:27146471-27146471|G/T|missense_variant	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	477.305136	952.595718	2.3348	0.0011144	0.7608	0.00036313	3.0957	0.0014776	477.30564898939815	44.12	0.47229	46.063	45.799	46.271	1.9438	0.0011199	0.0003522	NaN	41.956	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6185200			19193	3500	9254	9293							0.11752405488095974
LLLPGPSAA	9	Unmodified	_LLLPGPSAA_					0	0	0		ENST00000561048.1_1_15:64452264-64455191:-|nuORF;ENSG00000166794|ENST00000300026|PPIB	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	838.5043823122978	1	838.503281	837.496004	1.9993	0.0016764	0.14118	0.00011838	2.1404	0.0017948	838.5030214563506	50.942	0.21999	50.942	50.819	51.039	0					10	6	2	0	0	0	0.37357	1	21252	21252		21.747	0	1	335230			19194	3920	9255	9294	22231	22231					0.07075587874123812
LLLPGPSAA	9	Unmodified	_LLLPGPSAA_					0	0	0		ENST00000561048.1_1_15:64452264-64455191:-|nuORF;ENSG00000166794|ENST00000300026|PPIB	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	838.5045654177666	1	838.503281	837.496004	1.5155	0.0012707	0.52969	0.00044415	2.0452	0.0017149	838.5034909696086	49.178	0.40482	50.569	50.391	50.796	1.3911					28	12	3	0	0	0	0.09539	2	20590	20590;20645		50.855	0	1	1977600			19195	3920	9255	9294	22232;22233	22232					0.07075587874123812
LLLPGPSAA	9	Unmodified	_LLLPGPSAA_					0	0	0		ENST00000561048.1_1_15:64452264-64455191:-|nuORF;ENSG00000166794|ENST00000300026|PPIB	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	838.5053588747978	1	838.503281	837.496004	1.7359	0.0014555	0.16258	0.00013632	1.8985	0.0015919	838.5033726952622	48.707	0.43205	50.684	50.422	50.854	1.9772					26	13	3	0	0	0	0.051699	2	20374	20374;20424		67.344	0	1	1903700			19196	3920	9255	9294	22234;22235	22234					0.07075587874123812
LLLPGPSAA	9	Unmodified	_LLLPGPSAA_					0	0	0		ENST00000561048.1_1_15:64452264-64455191:-|nuORF;ENSG00000166794|ENST00000300026|PPIB	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	ENST00000561048.1_1_15:64452264-64455191:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	838.503281	837.496004	1.7484	0.001466	-0.18501	-0.00015513	1.5634	0.0013109	838.502773279272	50.506	0.28286	50.834	50.667	50.95	0.32824	0.076919	-0.00038261	NaN	67.344	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	354840			19197	3920	9255	9294							0.07075587874123812
LLLPIFFL	8	Unmodified	_LLLPIFFL_					0	0	0			REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	REV__OR6K6|p.F312Sfs*8|1|0.46|ENSG00000180433|chr1:158755746-158755746|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.3205139040947	2	488.317515	974.620476	2.7495	0.0013426	1.1853	0.00057883	3.9348	0.0019214	488.3180521719314	63.608	0.25252	65.552	65.377	65.629	1.9444					14	7	2	0	0	0	0.88958	1	26696	26696		2.8892	0	1	1679600	+		19198	11297	9256	9295	22236	22236					0.13215085361480305
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3620483279228	2	526.359911	1050.70527	0.89321	0.00047015	1.722	0.00090639	2.6152	0.0013765	526.3606858639121	18.286	0.68093	18.286	17.996	18.677	0					45	24	2	0	0	0	0.8523	1	7551	7551		0.52476	0	1	2183400	+		19199	13186	9257	9296	22237	22237					0.18194411107424457
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3615600466728	2	526.359911	1050.70527	0.98309	0.00051746	3.4059	0.0017927	4.389	0.0023102	526.3613694986227	20.349	0.90041	20.349	20.042	20.942	0					60	28	3	0	0	0	0.8462	2	8409	8409;8512		2.0598	0	1	1351600	+		19200	13186	9257	9296	22238;22239	22238					0.18194411107424457
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3609496951103	2	526.359911	1050.70527	0.38444	0.00020235	2.6914	0.0014166	3.0758	0.001619	526.3611431956508	16.416	0.27876	17.243	17.188	17.467	0.82643					23	13	2	0	0	0	0.8523	1	6872	6872		0.52476	0	1	5206300	+		19201	13186	9257	9296	22240	22240					0.18194411107424457
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2429992556572	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.701	1	22.878	22.378	23.378	1.177								0	0	0	0.42693	1	9063	9063		1.0715	0	1		+		19202	13186	9257	9296	22241	22241					0.18194411107424457
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2422057986259	3	351.242366	1050.70527	0.051373	1.8044E-05	0.58435	0.00020525	0.63572	0.00022329	351.24256174002704	21.728	1.1454	23.344	23.02	24.165	1.6158					55	37	3	0	0	0	0.85206	1	9116	9116		0.26902	0	1	1320600	+		19203	13186	9257	9296	22242	22242					0.18194411107424457
LLLPLIIEK	9	Unmodified	_LLLPLIIEK_					0	0	0			REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	REV__ENST00000460192.5_1_1:8025453-8031070:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2432433962822	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.48	1	18.783	18.283	19.283	1.3023								0	0	0	0.42693	1	7261	7261		0.26902	0	1		+		19204	13186	9257	9296	22243	22243					0.18194411107424457
LLLPLLLLA	9	Unmodified	_LLLPLLLLA_					0	0	0		nc|ENSG00000081842|Q9UN73-2|PCDHA6;nc|ENSG00000081842|Q9UN73-3|PCDHA6;ENSG00000081842|ENST00000529310|PCDHA6	REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.8551513552666	2	489.851722	977.68889	3.2044	0.0015697	3.9093	0.001915	7.1136	0.0034846	489.85343963172096	101.52	0.12662	101.69	101.61	101.74	0.17032					5	3	2	0	0	0	0.84963	1	42720	42720		0.6015	0	1	2358100	+		19205	10216	9258	9297	22244	22244					0.19915329941341042
LLLPLLLLA	9	Unmodified	_LLLPLLLLA_					0	0	0		nc|ENSG00000081842|Q9UN73-2|PCDHA6;nc|ENSG00000081842|Q9UN73-3|PCDHA6;ENSG00000081842|ENST00000529310|PCDHA6	REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	489.851722	977.68889	3.3232	0.0016279	3.0534	0.0014957	6.3766	0.0031236	489.8530022998011	101.41	0.095459	101.6	101.56	101.65	0.19076	-0.040878	-0.00042794	NaN	0.6015	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1360500	+		19206	10216	9258	9297							0.19915329941341042
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0700561404228	3	355.914249	1064.72092	0.55018	0.00019582	3.1729	0.0011293	3.723	0.0013251	355.9154128192261	25.086	0.77046	25.338	24.842	25.613	0.25197					43	24	2	0	0	0	0.12561	1	10288	10288		0.13989	0	1	697810	+		19207	8176	9259	9298	22245	22245					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0696899294853	3	355.914249	1064.72092	0.074705	2.6589E-05	2.4119	0.00085843	2.4866	0.00088502	355.915194090607	23.699	0.7083	24.937	24.588	25.297	1.2381					31	22	2	0	0	0	0.12561	1	9929	9929		0.13989	0	1	552790	+		19208	8176	9259	9298	22246	22246					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0702697634697	3	355.914249	1064.72092	0.15639	5.5661E-05	2.779	0.0009891	2.9354	0.0010448	355.9153164179595	24.352	0.36844	25.593	25.455	25.823	1.241					19	11	2	0	0	0	0.12561	1	10140	10140		0.13989	0	1	537280	+		19209	8176	9259	9298	22247	22247					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.1600219607353	3	355.914249	1064.72092	0.13225	4.707E-05	2.7897	0.0009929	2.922	0.00104	355.91522096294216	23.309	0.64904	24.96	24.56	25.209	1.6511					35	20	2	0	0	0	0.12561	1	9718	9718		0	0	1	631210	+		19210	8176	9259	9298	22248	22248					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0692321658134	3	355.914249	1064.72092	0.021717	7.7293E-06	1.3272	0.00047238	1.3489	0.0004801	355.914415781104	20.499	0.18043	22.074	21.969	22.149	1.5748					12	5	3	0	0	0	0.12561	1	8521	8521		0.13989	0	1	457380	+		19211	8176	9259	9298	22249	22249					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0696594119072	3	355.914249	1064.72092	0.04085	1.4539E-05	1.3423	0.00047775	1.3832	0.00049229	355.91461197424127	20.896	0.30354	22.471	22.409	22.712	1.5748					22	9	3	0	0	0	0.12561	1	8729	8729		0.13989	0	1	618470	+		19212	8176	9259	9298	22250	22250					0.19114697624490873
LLLPLLLLGT	10	Unmodified	_LLLPLLLLGT_					0	0	0			REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	REV__CACNA2D3|p.V1078G|1|0.06|ENSG00000157445|chr3:55074163-55074163|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0693237185478	3	355.914249	1064.72092	0.078194	2.783E-05	2.8906	0.0010288	2.9688	0.0010566	355.9148711474888	21.825	0.60011	23.44	23.2	23.8	1.6158					31	19	2	0	0	0	0.12561	1	9044	9044		0.13989	0	1	1503600	+		19213	8176	9259	9298	22251	22251					0.19114697624490873
LLLPLLLLL	9	Unmodified	_LLLPLLLLL_					0	0	0		ENSG00000121716|ENST00000609309|PILRB;ENST00000468403.1_1_1:153747811-153748660:+|nuORF;ENSG00000143554|ENST00000624995|SLC27A3;ENSG00000168140|ENST00000304735|VASN;ENSG00000105290|ENST00000221891|APLP1;nc|ENSG00000105290|P51693|APLP1;nc|ENSG00000143554|Q5K4L6-2|SLC27A3;ENSG00000164530|ENST00000373674|PI16;ENST00000534096.5_1_19:50838046-50848012:-|nuORF;NUCB1-FAM83E|1|fusion;ENSG00000137142|ENST00000377694|IGFBPL1;NUCB1-BAX|2|fusion;nc|ENSG00000121716|Q9UKJ0-3|PILRB;nc|ENSG00000164530|Q6UXB8-2|PI16;nc|ENSG00000143554|Q5K4L6-3|SLC27A3;nc|ENSG00000121716|Q9UKJ0-2|PILRB;ENST00000302351.8_1_5:73936651-73937086:-|nuORF;NUCB1-BAX|3|fusion;ENST00000534789.5_1_19:50838228-50848012:-|nuORF;NUCB1-BAX|1|fusion;ENSG00000174498|ENST00000327987|IGDCC3;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2;nc|ENSG00000137161|Q9BT09-2|CNPY3;ENSG00000164897|ENST00000297533|TMUB1;ENSG00000137161|ENST00000372836|CNPY3;ENSG00000166341|ENST00000299441|DCHS1;ENSG00000104805|ENST00000405315|NUCB1	ENSG00000121716|ENST00000609309|PILRB;REV__nc|ENSG00000173706|Q9ULI3-2|HEG1;PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;ENSG00000104805|ENST00000405315|NUCB1;REV__ENSG00000136928|ENST00000259455|GABBR2;REV__nc|ENSG00000143554|Q5K4L6-2|SLC27A3	PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	341.1372558474541	3	340.919223	1019.73584	2.248	0.00076637	0.26783	9.1309E-05	2.5158	0.00085768	340.9192590873013	97.211	0.24696	97.302	97.088	97.335	0.090881					9	7	2	0	0	0	0.11957	1	40588	40588		0	0	1	980720			19214	5352;2137;10216;11108;1475;10001	9260	9299	22252	22252					0.22676189492483445
LLLPLVLLPP	10	Unmodified	_LLLPLVLLPP_					0	0	0		ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529479861259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.622	1	70.622	70.122	71.122	0								0	0	0	0.66254	1	29415	29415		0.15932	0	1				19215	4847	9261	9300	22253	22253					0.20175288004134018
LLLPLVLLPP	10	Unmodified	_LLLPLVLLPP_					0	0	0		ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2530700564384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.834	1	70.834	70.334	71.334	0								0	0	0	0.66218	1	29504	29504		0.77653	0.61721	1				19216	4847	9261	9300	22254	22254					0.20175288004134018
LLLPLVLLPP	10	Unmodified	_LLLPLVLLPP_					0	0	0		ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.024	1	71.024	70.524	71.524	0								0	0	0	0.66254	1	29581	29581		0.15932	0	1				19217	4847	9261	9300	22255	22255					0.20175288004134018
LLLPLVLLPP	10	Unmodified	_LLLPLVLLPP_					0	0	0		ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531616091728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.218	1	71.218	70.718	71.718	0								0	0	0	0.66254	1	29660	29660		0.15932	0	1				19218	4847	9261	9300	22256	22256					0.20175288004134018
LLLPMRCR	8	Unmodified	_LLLPMRCR_					0	0	0			REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2935363650322	2	501.290982	1000.56741	2.3769	0.0011915	-1.0028	-0.00050267	1.3741	0.00068884	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.88958	1	27851	27851		2.8892	0.58649	1	2426300	+		19219	12444	9262	9301	22257	22257					0.06715061035504277
LLLPMRCR	8	Unmodified	_LLLPMRCR_					0	0	0			REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	REV__ENST00000330714.7_1_21:42780169-42780397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2915832400322	2	501.290982	1000.56741	2.8082	0.0014077	-0.86942	-0.00043583	1.9387	0.00097187	501.2903539027361	82.751	0.42683	83.021	82.817	83.244	0.27029					34	13	3	0	0	0	0.88958	1	34663	34663		2.8892	0	1	9663800	+		19220	12444	9262	9301	22258	22258					0.06715061035504277
LLLPPAPPPS	10	Unmodified	_LLLPPAPPPS_					0	0	0		ENST00000550254.1_1_12:49580068-49580335:-|nuORF	ENST00000550254.1_1_12:49580068-49580335:-|nuORF	ENST00000550254.1_1_12:49580068-49580335:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.3071166872978	2	501.305136	1000.59572	1.8398	0.00092228	2.2389	0.0011224	4.0787	0.0020447	501.30656846903884	45.738	0.7935	45.738	45.406	46.2	0					33	24	2	0	0	0	0.38674	2	19103	19103;19181		34.102	7.2188	1	880980			19221	7261	9263	9302	22259;22260	22259					0.09544405488088614
LLLPPAPPPS	10	Unmodified	_LLLPPAPPPS_					0	0	0		ENST00000550254.1_1_12:49580068-49580335:-|nuORF	ENST00000550254.1_1_12:49580068-49580335:-|nuORF	ENST00000550254.1_1_12:49580068-49580335:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.3068420290947	2	501.305136	1000.59572	2.3204	0.0011632	-0.053495	-2.6817E-05	2.2669	0.0011364	501.3053998304069	45.153	0.67885	45.48	45.166	45.844	0.32674					35	22	2	0	0	0	0.38674	3	18940	18878;18940;18992		34.102	7.2188	1	975620			19222	7261	9263	9302	22261;22262;22263	22262					0.09544405488088614
LLLPRRTRV	9	Unmodified	_LLLPRRTRV_					0	0	0			REV__ENST00000428021.1_2_2:58274102-58275677:+|nuORF	REV__ENST00000428021.1_2_2:58274102-58275677:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8777953982353	2	562.374749	1122.73495	1.2048	0.00067754	2.0199	0.0011359	3.2247	0.0018135	562.877403886493	53.697	0.24567	55.098	54.948	55.194	1.4005					16	9	2	0	0	0	0.59203	1	22472	22472		11.64	0.81637	1	4191900	+		19223	13007	9264	9303	22264	22264					0.1784878789612776
LLLPRRTRV	9	Unmodified	_LLLPRRTRV_					0	0	0			REV__ENST00000428021.1_2_2:58274102-58275677:+|nuORF	REV__ENST00000428021.1_2_2:58274102-58275677:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	562.374749	1122.73495	1.9472	0.0010951	1.5835	0.00089053	3.5307	0.0019856	562.877159477313	55.081	0.11231	55.402	55.32	55.432	0.32088	0.20393	8.9942E-05	NaN	11.64	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	647530	+		19224	13007	9264	9303							0.1784878789612776
LLLPSPLN	8	Unmodified	_LLLPSPLN_					0	0	0		ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.7731201052666	2	433.770929	865.527304	2.6645	0.0011558	3.1777	0.0013784	5.8422	0.0025342	433.772206971017	62.817	0.65034	64.761	64.315	64.965	1.9444					54	20	3	0	0	0	0.88504	1	26394	26394		5.7604	0	1	2957700			19225	6994	9265	9304	22265	22265					0.08916160908233906
LLLPSPLN	8	Unmodified	_LLLPSPLN_					0	0	0		ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	433.770929	865.527304	2.7453	0.0011908	3.1772	0.0013782	5.9226	0.002569	433.7722217419934	63.391	0.64985	64.804	64.376	65.025	1.4134	0.021307	-1.8767E-07	NaN	5.7604	52	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3815100			19226	6994	9265	9304							0.08916160908233906
LLLPSVFSSC	10	Unmodified	_LLLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1065.572192370892	1	1065.56489	1064.55762	1.7786	0.0018952	0.56125	0.00059805	2.3398	0.0024932	1065.5660545946632	66.666	0.73643	66.666	66.318	67.054	0					31	22	2	0	0	0	0.85604	1	27812	27812		6.2058	1.4498	1	538090	+		19227	14152	9266	9305	22266	22266					0.027921515111302142
LLLPSVFSSC	10	Unmodified	_LLLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.2879516482353	2	533.286085	1064.55762	1.9888	0.0010606	-0.581	-0.00030984	1.4078	0.00075077	533.2859421519642	66.692	1.0985	67.016	66.432	67.531	0.32449					101	35	4	0	0	0	0.65574	1	27920	27920		20.454	2.3186	1	9438800	+		19228	14152	9266	9305	22267	22267					0.027921515111302142
LLLPSVFSSC	10	Unmodified	_LLLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2894164919853	2	533.286085	1064.55762	2.4332	0.0012976	-0.34271	-0.00018276	2.0905	0.0011148	533.2859768985179	65.721	1.0631	67.12	66.881	67.944	1.3989					52	34	2	0	0	0	0.51515	1	27510	27510		26.884	2.2098	1	12362000	+		19229	14152	9266	9305	22268	22268					0.027921515111302142
LLLPSVFSSC	10	Unmodified	_LLLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2855712771416	2	533.286085	1064.55762	2.0281	0.0010815	-0.49954	-0.0002664	1.5285	0.00081515	533.2857405982548	65.464	0.91926	67.372	67.063	67.982	1.9085					64	29	3	0	0	0	0.51515	3	27519	27378;27519;27576		26.884	2.3186	1	11921000	+		19230	14152	9266	9305	22269;22270;22271	22270					0.027921515111302142
LLLPTIVIGL	10	Unmodified	_LLLPTIVIGL_					0	0	0			REV__nc|ENSG00000120519|Q0GE19-4|SLC10A7	REV__nc|ENSG00000120519|Q0GE19-4|SLC10A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3610107302666	2	526.359911	1050.70527	0.33269	0.00017512	2.0773	0.0010934	2.41	0.0012685	526.3609079169217	16.233	0.37689	17.272	17.091	17.467	1.0392					42	13	4	0	0	0	0.89803	1	6726	6726		1.4819	0	1	28760000	+		19231	9573	9267	9306	22272	22272					0.1819441110740172
LLLPTQIYS	9	Unmodified	_LLLPTQIYS_					0	0	0		ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1047.611254870892	1	1047.60847	1046.6012	2.1043	0.0022045	-2.6939	-0.0028222	-0.58962	-0.00061769	1047.6096136517122	68.206	0.43172	69.584	69.364	69.796	1.3778					29	13	3	0	0	0	0.026836	2	28629	28582;28629		92.491	24.411	1	3718100			19232	5450	9268	9307	22273;22274	22274					0.07976084279880524
LLLPTQIYS	9	Unmodified	_LLLPTQIYS_					0	0	0		ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3096191287041	2	524.307875	1046.6012	2.2322	0.0011704	-0.16398	-8.5975E-05	2.0682	0.0010844	524.3082160734895	68.163	0.55268	69.541	69.334	69.887	1.3778					35	17	4	0	0	0	0.026836	1	28594	28594		92.491	31.134	1	4093600			19233	5450	9268	9307	22275	22275					0.07976084279880524
LLLPTQIYS	9	Unmodified	_LLLPTQIYS_					0	0	0		ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1047.611987292767	1	1047.60847	1046.6012	2.7931	0.0029261	-4.2921	-0.0044964	-1.4989	-0.0015703	1047.6076564258944	67.663	0.40524	69.533	69.331	69.736	1.87					27	12	3	0	0	0	0.026836	2	28411	28356;28411		92.491	18.069	1	3986300			19234	5450	9268	9307	22276;22277	22277					0.07976084279880524
LLLPTQIYS	9	Unmodified	_LLLPTQIYS_					0	0	0		ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3094970583916	2	524.307875	1046.6012	1.7921	0.00093962	-0.54284	-0.00028461	1.2493	0.000655	524.308039676312	67.634	0.43694	69.504	69.299	69.736	1.87					29	13	3	0	0	0	0.10473	1	28361	28361		47.749	17.112	1	5244400			19235	5450	9268	9307	22278	22278					0.07976084279880524
LLLPTQIYS	9	Unmodified	_LLLPTQIYS_					0	0	0		ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1047.60847	1046.6012	1.9288	0.0020207	-0.3341	-0.00035	1.5947	0.0016707	1048.6110592537807	69.319	0.094696	69.641	69.562	69.657	0.32224	0.054995	0.0012672	NaN	92.491	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345640			19236	5450	9268	9307							0.07976084279880524
LLLPYGPYF	9	Unmodified	_LLLPYGPYF_					0	0	0			REV__ENSG00000176083|ENST00000349618|ZNF683	REV__ENSG00000176083|ENST00000349618|ZNF683	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.8006469607353	2	541.799686	1081.58482	1.9165	0.0010384	-0.27467	-0.00014882	1.6419	0.00088957	541.7996021805133	66.541	0.84643	66.865	66.495	67.341	0.32449					82	26	4	0	0	0	0.64949	1	27879	27879		9.3474	0	1	7054500	+		19237	11170	9269	9308	22279	22279					0.04729003113811814
LLLPYGPYF	9	Unmodified	_LLLPYGPYF_					0	0	0			REV__ENSG00000176083|ENST00000349618|ZNF683	REV__ENSG00000176083|ENST00000349618|ZNF683	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8008911013603	2	541.799686	1081.58482	2.4341	0.0013188	-0.95548	-0.00051768	1.4786	0.0008011	541.7995433454344	65.694	0.94302	67.093	66.663	67.606	1.3989					96	30	4	0	0	0	0.51832	2	27613	27613;27654		14.582	0	1	11867000	+		19238	11170	9269	9308	22280;22281	22280					0.04729003113811814
LLLQLLFQWLT	11	Unmodified	_LLLQLLFQWLT_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	694.3488036990166	2	694.421031	1386.82751	2.3616	0.0016399	0.84699	0.00058816	3.2086	0.0022281	694.4203132268079	83.838	0.58614	84.108	83.956	84.542	0.27029					23	18	2	0	0	0	0.14606	1	35052	35052		5.2969	0	1	565990	+		19239	9317	9270	9309	22282	22282					0.14956828118988597
LLLQLPDCPA	10	Unmodified	_LLLQLPDCPA_					0	0	0			REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.8010131716728	2	541.79936	1081.58417	1.5252	0.00082635	0.046665	2.5283E-05	1.5719	0.00085164	541.7995167150275	66.59	0.94814	66.59	66.253	67.201	0					89	29	4	0	0	0	0.84024	1	27638	27638		7.9102	1.187	1	8191400	+		19240	13471	9271	9310	22283	22283					0.046638404024406555
LLLQLTYFI	9	Unmodified	_LLLQLTYFI_					0	0	0			REV__ENST00000394971.7_1_16:31102457-31105584:-|nuORF	REV__ENST00000394971.7_1_16:31102457-31105584:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.7850829958916	2	562.341718	1122.66888	2.6517	0.0014911	3.2525	0.001829	5.9041	0.0033201	562.343819910775	69.884	0.80915	71.237	70.775	71.584	1.3536					32	25	2	0	0	0	0.10591	1	29446	29446		18.135	10.225	1	543810	+		19241	10865	9272	9311	22284	22284					0.11245534210706865
LLLQLYLQR	9	Unmodified	_LLLQLYLQR_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	579.5904418826103	2	580.363516	1158.71248	3.0451	0.0017673	-2.3331	-0.0013541	0.71202	0.00041323	580.3617795723155	108.6	0.12016	108.76	108.71	108.83	0.15899					8	5	2	0	0	0	0.11948	1	47017	47017		0.52476	0.52476	1	3552700			19242	3801	9273	9312	22285	22285					0.13947143707832765
LLLQLYLQR	9	Unmodified	_LLLQLYLQR_					0	0	0		ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	580.363516	1158.71248	3.1976	0.0018558	-1.7759	-0.0010307	1.4217	0.00082512	580.3626133958204	108.59	0.077148	108.75	108.7	108.77	0.1548	-0.007104	0.00030408	NaN	0.52476	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2839400			19243	3801	9273	9312							0.13947143707832765
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2833434939384	2	497.2844	992.554247	1.352	0.00067235	-3.2596	-0.001621	-1.9076	-0.00094861	497.2826643781341	70.674	0.36546	70.674	70.477	70.842	0					30	11	3	0	0	0	0.086433	3	29442	29395;29442;29497		53.833	6.616	1	4400500	+		19244	15410	9274	9313	22286;22287;22288	22287					0.057672247287769096
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2840148806572	2	497.2844	992.554247	1.9265	0.000958	-2.3776	-0.0011823	-0.45114	-0.00022435	497.2829736411484	69.121	0.44843	70.486	70.253	70.701	1.3657					37	14	4	0	0	0	0.086433	2	29005	29005;29060		53.833	1.8413	1	13841000	+		19245	15410	9274	9313	22289;22290	22289					0.057672247287769096
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2838317751884	2	497.2844	992.554247	1.6276	0.00080937	-2.4652	-0.0012259	-0.83768	-0.00041656	497.28304461628153	68.6	0.46185	70.453	70.217	70.679	1.853					37	14	4	0	0	0	0.063746	2	28756	28756;28809		62.573	10.304	1	13383000	+		19246	15410	9274	9313	22291;22292	22291					0.057672247287769096
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	497.2844	992.554247	1.352	0.00067235	-3.2596	-0.001621	-1.9076	-0.00094861	497.2826643781341	70.674	0.36546	70.674	70.477	70.842	0	0.14183	-0.00015592	NaN	62.573	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4400500	+		19247	15410	9274	9313							0.057672247287769096
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.2844	992.554247	1.9265	0.000958	-2.3776	-0.0011823	-0.45114	-0.00022435	497.2829736411484	69.121	0.44843	70.486	70.253	70.701	1.3657	-0.046088	0.0007213	NaN	62.573	37	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13841000	+		19248	15410	9274	9313							0.057672247287769096
LLLQSYGSI	9	Unmodified	_LLLQSYGSI_					0	0	0			REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	REV__tr|A0A7D6VRI1|A0A7D6VRI1_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_00955PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.2844	992.554247	1.6276	0.00080937	-2.4652	-0.0012259	-0.83768	-0.00041656	497.28304461628153	68.6	0.46185	70.453	70.217	70.679	1.853	-0.079412	0.00063414	NaN	62.573	37	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13383000	+		19249	15410	9274	9313							0.057672247287769096
LLLQVQHASK	10	Unmodified	_LLLQVQHASK_					0	0	0		ENST00000450250.1_1_22:42397712-42397922:-|nuORF;SLC25A4|p.T139Qfs*7|1|0.31|ENSG00000151729|chr4:185145065-185145087|GGACCAGGTTGGCTGCTGATGTG/-|frameshift_variant;ENSG00000169100|ENST00000381401|SLC25A6;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000005022|ENST00000317881|SLC25A5	ENST00000450250.1_1_22:42397712-42397922:-|nuORF	ENST00000450250.1_1_22:42397712-42397922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.5647765994072	3	379.564391	1135.67134	0.020471	7.7702E-06	0.80639	0.00030608	0.82686	0.00031385	379.5646462738036	20.067	0.27508	21.193	21.05	21.325	1.1254					18	8	3	0	0	0	0.2157	1	8348	8348		47.053	18.558	1	1861100			19250	478	9275	9314	22293	22293					0.10893382668359664
LLLQVQHASK	10	Unmodified	_LLLQVQHASK_					0	0	0		ENST00000450250.1_1_22:42397712-42397922:-|nuORF;SLC25A4|p.T139Qfs*7|1|0.31|ENSG00000151729|chr4:185145065-185145087|GGACCAGGTTGGCTGCTGATGTG/-|frameshift_variant;ENSG00000169100|ENST00000381401|SLC25A6;ENSG00000151729|ENST00000281456|SLC25A4;ENSG00000005022|ENST00000317881|SLC25A5	ENST00000450250.1_1_22:42397712-42397922:-|nuORF	ENST00000450250.1_1_22:42397712-42397922:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5642883181572	3	379.564391	1135.67134	0.12793	4.8557E-05	-0.063679	-2.417E-05	0.064249	2.4386E-05	379.5643295272335	19.555	0.21999	21.079	20.917	21.137	1.5237					16	6	3	0	0	0	0.37525	1	8100	8100		34.79	17.348	1	1258800			19251	478	9275	9314	22294	22294					0.10893382668359664
LLLRFCDL	8	Unmodified	_LLLRFCDL_					0	0	0			REV__nc|ENSG00000198881|Q8WXK4|ASB12	REV__nc|ENSG00000198881|Q8WXK4|ASB12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7829162478447	2	496.783513	991.552473	2.0325	0.0010097	-0.32348	-0.0001607	1.709	0.00084902	496.78314049929867	78.941	0.27727	80.676	80.506	80.784	1.735					21	8	3	0	0	0	0.39757	1	33118	33118		54.774	5.1046	1	1872100	+		19252	11752	9276	9315	22295	22295					0.05635892439147483
LLLRFCDL	8	Unmodified	_LLLRFCDL_					0	0	0			REV__nc|ENSG00000198881|Q8WXK4|ASB12	REV__nc|ENSG00000198881|Q8WXK4|ASB12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	496.783513	991.552473	2.0325	0.0010097	-0.32348	-0.0001607	1.709	0.00084902	496.78314049929867	78.941	0.27727	80.676	80.506	80.784	1.735	0.011119	0.00062982	NaN	54.774	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1872100	+		19253	11752	9276	9315							0.05635892439147483
LLLRKGVNL	9	Unmodified	_LLLRKGVNL_					0	0	0			REV__tr|A0A553SNA2|A0A553SNA2_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24040PE=4SV=1	REV__tr|A0A553SNA2|A0A553SNA2_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24040PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.5662719607353	3	342.565843	1024.6757	-0.18147	-6.2165E-05	1.1117	0.00038083	0.93022	0.00031866	342.5663182752097	27.695	0.31093	28.974	28.842	29.153	1.2789					15	9	2	0	0	0	0.50272	1	11615	11615		15.248	0	1	738010	+		19254	15049	9277	9316	22296	22296					0.16434891881931435
LLLRLREL	8	Unmodified	_LLLRLREL_					0	0	0		ENST00000532281.1_3_11:46639193-46639418:-|nuORF	ENST00000532281.1_3_11:46639193-46639418:-|nuORF	ENST00000532281.1_3_11:46639193-46639418:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	342.5471679568291	3	342.565843	1024.6757	-0.18147	-6.2165E-05	1.1117	0.00038083	0.93022	0.00031866	342.5663182752097	27.695	0.31093	28.974	28.842	29.153	1.2789					15	9	2	0	0	0	2.3239	1	11593	11593		19.257	0	1	738010			19255	7176	9278	9317	22297	22297					0.16434891881931435
LLLRPRMTLL	10	Unmodified	_LLLRPRMTLL_					0	0	0			REV__OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant	REV__OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3944579958916	2	613.394293	1224.77403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.735	1	99.961	99.461	100.46	0.22545								0	0	0	0.66237	1	41951	41951		0.45834	0	1		+		19256	8851	9279	9318	22298	22298					0.17063752135504728
LLLRRRWRTR	10	Unmodified	_LLLRRRWRTR_					0	0	0			REV__ENST00000431489.5_1_2:62933068-62933182:+|nuORF	REV__ENST00000431489.5_1_2:62933068-62933182:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1992370486259	3	475.972378	1424.8953	3.1038	0.0014773	-1.8459	-0.00087859	1.2579	0.00059871	476.30676248144977	57.389	0.11892	57.712	57.673	57.792	0.32298					5	3	2	0	0	0	0.1256	1	24063	24063		0	0	1	413000	+		19257	13026	9280	9319	22299	22299					0.19985135613001148
LLLRRVEVVL	10	Unmodified	_LLLRRVEVVL_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.4046508669853	2	605.405715	1208.79688	1.567	0.00094865	-1.0996	-0.0006657	0.46738	0.00028295	605.4044693562314	106.02	0.14156	106.02	105.93	106.07	0					16	6	3	0	0	0	0.89803	1	45140	45140		1.6526	0.32309	1	66583000	+		19258	14526	9281	9320	22300	22300					0.20083094524625267
LLLRRVEVVL	10	Unmodified	_LLLRRVEVVL_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.4077026247978	2	605.405715	1208.79688	2.6463	0.0016021	-0.3751	-0.00022709	2.2712	0.001375	605.405463938124	107.46	0.24629	107.51	107.37	107.62	0.052452					28	11	4	0	0	0	0.89803	1	45932	45932		1.6526	0.32309	1	198390000	+		19259	14526	9281	9320	22301	22301					0.20083094524625267
LLLRRVRLPEV	11	Unmodified	_LLLRRVRLPEV_					0	0	0			REV__tr|A0A7D6VPB9|A0A7D6VPB9_9CLOTSsrA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=smpBPE=3SV=1	REV__tr|A0A7D6VPB9|A0A7D6VPB9_9CLOTSsrA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=smpBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	454.9674255251884	3	455.301389	1362.88234	1.6048	0.00073069	0.59457	0.00027071	2.1994	0.0010014	455.30186336484803	24.65	0.17924	25.891	25.732	25.912	1.241					9	5	2	0	0	0	0.14606	1	10310	10310		0.40827	0.24894	1	463150	+		19260	15355	9282	9321	22302	22302					0.21541259710284066
LLLRSPDTTVI	11	Unmodified	_LLLRSPDTTVI_					0	0	0		NXPE4|p.M469T|1|0.07|ENSG00000137634|chr11:114571167-114571167|A/G|missense_variant	NXPE4|p.M469T|1|0.07|ENSG00000137634|chr11:114571167-114571167|A/G|missense_variant	NXPE4|p.M469T|1|0.07|ENSG00000137634|chr11:114571167-114571167|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3700439333916	2	614.368995	1226.72344	2.1823	0.0013408	-0.39674	-0.00024375	1.7856	0.001097	614.3687494008938	68.003	0.46201	69.873	69.643	70.105	1.87					51	14	5	0	0	0	0.80586	1	28522	28522		15.248	1.3424	1	22270000			19261	8041	9283	9322	22303	22303					0.11914501291471424
LLLSIISKR	9	Unmodified	_LLLSIISKR_					0	0	0			REV__ENSG00000269964|ENST00000684080|MEI4	REV__ENSG00000269964|ENST00000684080|MEI4	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2402831912041	3	348.237615	1041.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.554	1	58.877	58.377	59.377	0.32298								0	0	0	0.42693	1	24541	24541		0.26902	0	1		+		19262	12002	9284	9323	22304	22304					0.1718375867915256
LLLSILHW	8	Unmodified	_LLLSILHW_					0	0	0			REV__ENST00000481541.1_1_2:85785935-85786013:-|nuORF	REV__ENST00000481541.1_1_2:85785935-85786013:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2061950564384	3	332.207656	993.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.062	1	72.062	71.562	72.562	0								0	0	0	1.0178	1	30007	30007		0.45834	0	1		+		19263	13359	9285	9324	22305	22305					0.10408129070572159
LLLSLLSLYV	10	Unmodified	_LLLSLLSLYV_					0	0	0			REV__nc|ENSG00000100170|P13866-2|SLC5A1	REV__nc|ENSG00000100170|P13866-2|SLC5A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5789062380791	3	378.577526	1132.71075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.387	1	31.678	31.178	32.178	0.29086								0	0	0	0.66218	1	13175	13175		0.77653	0	1		+		19264	8972	9286	9325	22306	22306					0.14970089899247796
LLLSLLSLYV	10	Unmodified	_LLLSLLSLYV_					0	0	0			REV__nc|ENSG00000100170|P13866-2|SLC5A1	REV__nc|ENSG00000100170|P13866-2|SLC5A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5792724490166	3	378.577526	1132.71075	0.50186	0.00018999	2.7899	0.0010562	3.2917	0.0012462	378.5788022668036	28.964	0.753	30.763	30.298	31.051	1.7987					82	24	6	0	0	0	0.89803	1	12136	12136		0.77653	0	1	143200000	+		19265	8972	9286	9325	22307	22307					0.14970089899247796
LLLSNVFMSC	10	Unmodified	_LLLSNVFMSC_					0	0	0			REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	376.1944763064384	3	376.192689	1125.55624	1.5939	0.00059963	2.4031	0.00090401	3.997	0.0015036	376.1939287971113	51.443	0.68229	51.769	51.446	52.128	0.32553					33	21	3	0	0	0	0.82659	1	21532	21532		5.4027	0.68679	1	1545800	+		19266	9437	9287	9326	22308	22308					-0.0015180584928202734
LLLSNVFMSC	10	Unmodified	_LLLSNVFMSC_					0	0	0			REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	376.192689	1125.55624	1.5939	0.00059963	2.4031	0.00090401	3.997	0.0015036	376.1939287971113	51.443	0.68229	51.769	51.446	52.128	0.32553	0.11741	0.00046082	NaN	5.4027	33	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1545800	+		19267	9437	9287	9326							-0.0015180584928202734
LLLSNVFMSC	10	Unmodified	_LLLSNVFMSC_					0	0	0			REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	376.192689	1125.55624	1.8228	0.00068572	2.3387	0.00087978	4.1614	0.0015655	376.1940843432356	50.193	0.59767	51.584	51.324	51.921	1.3911	-0.06673	0.00038814	NaN	5.4027	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1099600	+		19268	9437	9287	9326							-0.0015180584928202734
LLLSQIFHV	9	Unmodified	_LLLSQIFHV_					0	0	0		ENSG00000144468|ENST00000392062|RHBDD1	ENSG00000144468|ENST00000392062|RHBDD1	ENSG00000144468|ENST00000392062|RHBDD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1649658083916	2	535.32386	1068.63317	2.5718	0.0013767	0.78374	0.00041955	3.3555	0.0017963	535.3243066611539	45.149	0.22714	46.514	46.369	46.596	1.3653					11	6	2	0	0	0	0.116	1	18867	18867		9.3474	4.1168	1	920520			19269	3079	9288	9327	22309	22309					0.10159496753726671
LLLSTKQN	8	Unmodified	_LLLSTKQN_					0	0	0			REV__ENST00000503171.5_1_4:106317436-106374979:-|nuORF	REV__ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	916.5458251833916	1	916.546208	915.538931	1.427	0.0013079	-2.3009	-0.0021089	-0.87391	-0.00080098	916.5433330450587	77.211	0.3522	78.962	78.721	79.073	1.7514					12	10	2	0	0	0	0.87276	1	32378	32378		13.508	4.1604	1	683820	+		19270	13515	9289	9328	22310	22310					0.07778357931567825
LLLSWKQM	8	Unmodified	_LLLSWKQM_					0	0	0		nc|ENSG00000142002|Q86TI2-4|DPP9;nc|ENSG00000142002|Q86TI2|DPP9;ENSG00000142002|ENST00000262960|DPP9;ENST00000601764.5_1_19:4697564-4723732:-|nuORF;ENST00000597145.5_1_19:4685559-4714096:-|nuORF	nc|ENSG00000142002|Q86TI2-4|DPP9	nc|ENSG00000142002|Q86TI2-4|DPP9	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1967956423759	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.466	1	39.466	38.966	39.966	0								0	0	0	1.0178	1	16540	16540		0.45834	0	1				19271	2981	9290	9329	22311	22311					0.06004178956209216
LLLTFALRYYW	11	Unmodified	_LLLTFALRYYW_					0	0	0			REV__tr|A0A553SKH4|A0A553SKH4_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_18680PE=3SV=1	REV__tr|A0A553SKH4|A0A553SKH4_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_18680PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	729.9041015505791	2	729.91083	1457.80711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.281	1	95.47	94.97	95.97	1.1887								0	0	0	0.63775	1	39664	39664		5.2969	2.0156	1		+		19272	14952	9291	9330	22312	22312					0.09651657459176022
LLLTKICYI	9	Unmodified	_LLLTKICYI_					0	0	0		ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	ENSG00000051341|ENST00000264233|POLQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3334838747978	2	540.330296	1078.64604	2.6088	0.0014096	1.2698	0.00068612	3.8786	0.0020957	540.3314531338382	69.623	0.74615	70.989	70.787	71.533	1.3657					49	23	3	0	0	0	0.64949	1	29229	29229		9.3474	0	1	2363300			19273	702	9292	9331	22313	22313					0.1098619182157563
LLLTKMHY	8	Unmodified	_LLLTKMHY_					0	0	0			REV__ENSG00000181541|ENST00000317605|MAB21L2	REV__ENSG00000181541|ENST00000317605|MAB21L2	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1965515017509	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.036	1	39.345	38.845	39.845	0.30857								0	0	0	1.0178	1	16419	16419		0.45834	0	1		+		19274	9143	9293	9332	22314	22314					0.060041789561978476
LLLTLAVLHV	10	Unmodified	_LLLTLAVLHV_					0	0	0		tr|A0A553SHY0|A0A553SHY0_NIACIBileacid:sodiumsymporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13845PE=4SV=1	tr|A0A553SHY0|A0A553SHY0_NIACIBileacid:sodiumsymporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13845PE=4SV=1	tr|A0A553SHY0|A0A553SHY0_NIACIBileacid:sodiumsymporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13845PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3648559451103	2	546.362985	1090.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.36	1	107.42	106.92	107.92	0.052452								0	0	0	0.66237	1	45910	45910		0.45834	0.057624	1				19275	16175	9294	9333	22315	22315					0.16968929338941052
LLLTLVYLGK	10	Unmodified	_LLLTLVYLGK_					0	0	0		ENST00000263150.8_1_10:1142124-1149563:+|nuORF	ENST00000263150.8_1_10:1142124-1149563:+|nuORF	ENST00000263150.8_1_10:1142124-1149563:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2514526247978	3	378.249521	1131.72673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.24	1	100.24	99.739	100.74	0								0	0	0	0.66254	1	41961	41961		0.15932	0.15932	1				19276	5639	9295	9334	22316	22316					0.16613796136152814
LLLTNLNRLR	10	Unmodified	_LLLTNLNRLR_					0	0	0			REV__nc|ENSG00000130508|Q92626-2|PXDN	REV__nc|ENSG00000130508|Q92626-2|PXDN	MSMS	GG20161007_CRH_Patient100_W632_02	4	409.2617980837822	3	409.262823	1224.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.419	1	61.388	60.888	61.888	1.969								0	0	0	0.66161	1	24930	24930		1.7423	1.334	1		+		19277	9787	9296	9335	22317	22317					0.1632473585941625
LLLVFYWRPQW	11	Unmodified	_LLLVFYWRPQW_					0	0	0		ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	ENSG00000187527|ENST00000342358|ATP13A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2881347537041	3	507.618607	1519.83399	2.1265	0.0010794	-0.99693	-0.00050606	1.1295	0.00057338	507.6173545957951	45.485	1.4452	45.485	45.091	46.536	0					134	45	5	0	0	0	1.0357	1	18974	18974		1.4551	0	1	9828500			19278	4824	9297	9336	22318	22318					0.09486766070358499
LLLVVRRRRR	10	Unmodified	_LLLVVRRRRR_					0	0	0		ENSG00000171587|ENST00000400454|DSCAM;KIAA0146-DSCAM|1|fusion;DDX60L-DSCAM|1|fusion	ENSG00000171587|ENST00000400454|DSCAM	ENSG00000171587|ENST00000400454|DSCAM	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.9608642458916	2	668.959846	1335.90514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.56	1	72.56	72.06	73.06	0								0	0	0	0.6624	1	30211	30211		0.40072	0	1				19279	4198	9298	9337	22319	22319					0.250623236184083
LLLWFLLWFRL	11	Unmodified	_LLLWFLLWFRL_					0	0	0			REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3124877810478	3	507.311114	1518.91151	2.9254	0.0014841	-1.2933	-0.00065613	1.632	0.00082795	507.3107247037459	90.653	1.2725	90.862	90.081	91.354	0.20904					90	39	3	0	0	0	1.0402	1	37850	37850		0.094841	0	1	1379600	+		19280	13716	9299	9338	22320	22320					0.17281404006530465
LLLWFLLWFRL	11	Unmodified	_LLLWFLLWFRL_					0	0	0			REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.3128539919853	3	507.311114	1518.91151	5.42	0.0027496	-1.0833	-0.00054959	4.3366	0.0022	507.64426173747484	87.897	0.60136	88.953	88.639	89.24	1.0562					28	18	2	0	0	0	0.14606	1	36982	36982		0.094841	0	1	767190	+		19281	13716	9299	9338	22321	22321					0.17281404006530465
LLLWFLLWFRL	11	Unmodified	_LLLWFLLWFRL_					0	0	0			REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	REV__ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	507.311114	1518.91151	4.7418	0.0024056	-0.61904	-0.00031405	4.1228	0.0020915	507.64461380489826	87.223	0.40049	88.718	88.518	88.919	1.4953	-0.047216	0.00073161	NaN	0.094841	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	668440	+		19282	13716	9299	9338							0.17281404006530465
LLLWKMRLFQR	11	Unmodified	_LLLWKMRLFQR_					0	0	0		ENST00000484153.1_1_1:11826815-11837330:+|nuORF;ENSG00000215910|ENST00000688073|C1orf167;nc|nan|Q5SNV9-2|C1orf167;nc|nan|Q5SNV9-3|C1orf167	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	ENST00000484153.1_1_1:11826815-11837330:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9724304080009	3	501.970875	1502.89079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.441	1	53.441	52.941	53.941	0								0	0	0	0.63775	1	22284	22284		0.45452	0	1				19283	5262	9300	9339	22322	22322					0.15946490355213427
LLLWQFFC	8	Unmodified	_LLLWQFFC_					0	0	0		ENST00000393053.6_1_12:98941529-98941589:+|nuORF	ENST00000393053.6_1_12:98941529-98941589:+|nuORF	ENST00000393053.6_1_12:98941529-98941589:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	357.2842590212822	3	357.189496	1068.54666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.621	1	61.951	61.451	62.451	0.32974								0	0	0	1.0178	1	25818	25818		0.45834	0	1				19284	6266	9301	9340	22323	22323					0.015127939275089375
LLLYDVLL	8	Unmodified	_LLLYDVLL_					0	0	0		Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense;Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|238|3|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense	Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|199|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.3076965212822	2	481.302062	960.58957	1.9627	0.00094465	-0.38209	-0.0001839	1.5806	0.00076074	481.3019239114094	79.006	0.76508	79.006	78.441	79.206	0					79	24	4	0	0	0	0.89008	1	32770	32770		2.5775	0	1	135410000			19285	7608	9302	9341	22324	22324					0.1076988725657202
LLLYFCPH	8	Unmodified	_LLLYFCPH_					0	0	0		ENST00000400335.8_1_22:29538402-29538717:+|nuORF	ENST00000400335.8_1_22:29538402-29538717:+|nuORF	ENST00000400335.8_1_22:29538402-29538717:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2639343142509	2	503.264956	1004.51536	4.3278	0.002178	-3.0113	-0.0015155	1.3165	0.00066256	503.263334020158	93.116	0.39275	93.988	93.801	94.194	0.87176					21	11	2	0	0	0	0.84707	1	39187	39187		17.087	9.1764	1	757440			19286	6343	9303	9342	22325	22325					0.01328220893390153
LLLYFHSI	8	Unmodified	_LLLYFHSI_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2943298220634	2	503.292028	1004.5695	1.8031	0.00090747	1.4841	0.00074695	3.2872	0.0016544	503.29361784486184	80.653	0.51907	82.349	82.091	82.61	1.6959					47	16	4	0	0	0	0.87803	1	33896	33896		10.183	0	1	8973500			19287	3357	9304	9343	22326	22326					0.06740136316614098
LLLYFRDE	8	Unmodified	_LLLYFRDE_					0	0	0			REV__ENSG00000122420|ENST00000370757|PTGFR	REV__ENSG00000122420|ENST00000370757|PTGFR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.2856933474541	3	356.862325	1067.56515	0.16063	5.7324E-05	0.7254	0.00025887	0.88603	0.00031619	356.8626039469263	24.336	0.27748	25.577	25.424	25.701	1.241					11	8	2	0	0	0	2.3239	1	10190	10190		1.8442	0	1	385380	+		19288	9607	9305	9344	22327	22327					0.034066271030496864
LLLYHLVL	8	Unmodified	_LLLYHLVL_					0	0	0		ENST00000546198.5_1_12:65981221-66035915:-|nuORF	ENST00000546198.5_1_12:65981221-66035915:-|nuORF	ENST00000546198.5_1_12:65981221-66035915:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3170349001884	2	492.318046	982.621539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.187	1	54.508	54.008	55.008	0.32088								0	0	0	1.0178	1	22694	22694		24.21	0	1				19289	7239	9306	9345	22328	22328					0.12953299730361323
LLLYVNAMV	9	Unmodified	_LLLYVNAMV_					0	0	0			REV__ENSG00000280021|ENST00000624103|OR51F1	REV__ENSG00000280021|ENST00000624103|OR51F1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6244994997978	2	518.298996	1034.58344	1.4015	0.00072639	-4.1661	-0.0021593	-2.7646	-0.0014329	518.2955322621082	52.269	0.65561	54.241	53.954	54.61	1.9722					25	20	2	0	0	0	0.08828	1	21890	21890		28.487	3.813	1	2733000	+		19290	12027	9307	9346	22329	22329					0.06753045753384868
LLMATILHL	9	Unmodified	_LLMATILHL_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	512.2692748904228	2	512.814813	1023.61507	2.5466	0.0013059	-0.98516	-0.0005052	1.5614	0.00080073	512.8142851978316	78.403	0.31013	80.138	79.948	80.258	1.735					15	9	2	0	0	0	0.10844	1	32847	32847		16.942	3.4344	1	927610			19291	2392	9308	9347	22330	22330					0.10421038507342928
LLMATILHL	9	Unmodified	_LLMATILHL_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	512.814813	1023.61507	1.9962	0.0010237	-0.061331	-3.1452E-05	1.9349	0.00099223	512.8148623757207	79.973	0.25339	80.274	80.131	80.385	0.30047	0.077533	2.6221E-05	NaN	30.225	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338920			19292	2392	9308	9347							0.10421038507342928
LLMATILHL	9	Unmodified	_LLMATILHL_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	512.814813	1023.61507	3.0831	0.0015811	0.19649	0.00010076	3.2796	0.0016818	512.8147030882976	78.91	0.31307	80.177	80.003	80.316	1.2668	-0.019395	0.00029065	NaN	30.225	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1088800			19293	2392	9308	9347							0.10421038507342928
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883849978447	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3536	1	1.5006	1.0006	2.0006	0.14703								0	0	0	0.63775	1	559	559		0	0	1				19294	2573	9309	9348	22331	22331					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7917	1	1.9388	1.4388	2.4388	0.14703								0	0	0	0.63775	1	738	738		0	0	1				19295	2573	9309	9348	22332	22332					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885986208916	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9025	1	2.0496	1.5496	2.5496	0.14703								0	0	0	0.63775	1	783	783		0	0	1				19296	2573	9309	9348	22333	22333					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884460330009	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9983	1	2.1208	1.6208	2.6208	0.12256								0	0	0	0.63775	1	822	822		0	0	1				19297	2573	9309	9348	22334	22334					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886291384697	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1327	1	2.2552	1.7552	2.7552	0.12256								0	0	0	0.63775	1	877	877		0	0	1				19298	2573	9309	9348	22335	22335					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7921	1	3.8941	3.3941	4.3941	0.10199								0	0	0	0.63775	1	1565	1565		0	0	1				19299	2573	9309	9348	22336	22336					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9127	1	4.0147	3.5147	4.5147	0.10199								0	0	0	0.63775	1	1615	1615		0	0	1				19300	2573	9309	9348	22337	22337					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2413	1	4.3433	3.8433	4.8433	0.10199								0	0	0	0.63775	1	1753	1753		0	0	1				19301	2573	9309	9348	22338	22338					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884155154228	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3602	1	4.4622	3.9622	4.9622	0.10199								0	0	0	0.63775	1	1802	1802		0	0	1				19302	2573	9309	9348	22339	22339					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884460330009	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4609	1	4.549	4.049	5.049	0.08803								0	0	0	0.63775	1	1844	1844		0	0	1				19303	2573	9309	9348	22340	22340					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882934451103	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4703	1	6.0916	5.5916	6.5916	0.62127								0	0	0	0.63775	1	2259	2259		0	0	1				19304	2573	9309	9348	22341	22341					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884460330009	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5925	1	6.2137	5.7137	6.7137	0.62127								0	0	0	0.63775	1	2309	2309		0	0	1				19305	2573	9309	9348	22342	22342					0.01010232310113679
LLMCEIPMVEL	11	Unmodified	_LLMCEIPMVEL_					0	0	0		ENST00000470655.5_1_22:37578844-37581961:-|nuORF;nc|ENSG00000133466|Q9BXI9-1|C1QTNF6;ENST00000493023.1_1_22:37578230-37581504:-|nuORF;ENSG00000133466|ENST00000337843|C1QTNF6	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	ENST00000470655.5_1_22:37578844-37581961:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8891174197197	3	430.888389	1289.64334	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.156	1	29.435	28.935	29.935	1.2789								0	0	0	0.63775	1	11802	11802		0	0	1				19306	2573	9309	9348	22343	22343					0.01010232310113679
LLMEELSETLA	11	Unmodified	_LLMEELSETLA_					0	0	0		tr|A0A7D6VUD9|A0A7D6VUD9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08140PE=4SV=1	tr|A0A7D6VUD9|A0A7D6VUD9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08140PE=4SV=1	tr|A0A7D6VUD9|A0A7D6VUD9_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08140PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	624.8240844607353	2	624.823229	1247.63191	2.3255	0.001453	-2.5581	-0.0015984	-0.23265	-0.00014536	624.8218641101153	92.531	0.48521	92.531	92.258	92.744	0					45	15	4	0	0	0	0.84637	1	38725	38725		13.042	2.243	1	4171200			19307	16947	9310	9349	22344	22344					0.017994498119833224
LLMEHIFKL	9	Unmodified	_LLMEHIFKL_					0	0	0		ENST00000552484.1_1_12:95422157-95422295:-|nuORF;ENST00000547594.5_1_12:95420624-95451409:-|nuORF;ENSG00000120798|ENST00000333003|NR2C1	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	ENST00000552484.1_1_12:95422157-95422295:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.8936035037041	3	381.891339	1142.65219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.082	1	61.051	60.551	61.551	1.969								0	0	0	0.37945	1	24787	24787		10.8	0.64894	1				19308	2117	9311	9350	22345	22345					0.08656710053128336
LLMEHIQEI	9	Unmodified	_LLMEHIQEI_					0	0	0		ENST00000483412.5_1_9:123170580-123298708:-|nuORF;CDK5RAP2|p.Y1498Gfs*4|1|0.29|ENSG00000136861|chr9:120409227-120409240|TCACGCTGGCATAC/-|frameshift_variant;nc|ENSG00000136861|Q96SN8-4|CDK5RAP2;nc|ENSG00000136861|Q96SN8-3|CDK5RAP2;nc|ENSG00000136861|Q96SN8-2|CDK5RAP2;ENSG00000136861|ENST00000349780|CDK5RAP2	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	ENST00000483412.5_1_9:123170580-123298708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3030883669853	2	563.302267	1124.58998	2.1088	0.0011879	0.0054075	3.046E-06	2.1142	0.0011909	563.3025741371403	46.859	0.18522	48.835	48.717	48.902	1.976					8	5	2	0	0	0	0.20244	1	19633	19633		32.786	4.2988	1	643940			19309	143	9312	9351	22346	22346					0.03266938914111961
LLMELLVKV	9	Unmodified	_LLMELLVKV_					0	0	0			REV__tr|A0A553SU23|A0A553SU23_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06140PE=4SV=1	REV__tr|A0A553SU23|A0A553SU23_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_06140PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3385497927666	2	529.338121	1056.66169	1.8905	0.0010007	-2.2624	-0.0011976	-0.37188	-0.00019685	529.3368187534674	77.131	0.28143	77.131	76.94	77.221	0					14	8	2	0	0	0	0.39927	1	32112	32112		20.454	2.3073	1	558240	+		19310	15275	9313	9352	22347	22347					0.13562478338644723
LLMGTRLGPI	10	Unmodified	_LLMGTRLGPI_					0	0	0			REV__chr11:559860-561762|286|18.3|0.63|4.87|+|1|TE_info:AluJr,AluJr_dup50847,Alu,SINE,donor,-,559771,559860|None,RASSF7|2	REV__chr11:559860-561762|286|18.3|0.63|4.87|+|1|TE_info:AluJr,AluJr_dup50847,Alu,SINE,donor,-,559771,559860|None,RASSF7|2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.2142211794853	3	357.551205	1069.63179	-1.0143	-0.00036265	-2.3349	-0.00083483	-3.3491	-0.0011975	357.88450702782825	36.339	0.32071	37.616	37.502	37.823	1.2762					22	17	2	0	0	0	0.12551	1	15229	15229		1.5923	0.89462	1	996700	+		19311	8236	9314	9353	22348	22348					0.09975539393280997
LLMRIHFH	8	Unmodified	_LLMRIHFH_					0	0	0		nc|ENSG00000166348|Q70EL1-4|USP54;nc|ENSG00000166348|Q70EL1-6|USP54;ENST00000498143.5_1_10:75279553-75335416:-|nuORF;ENSG00000166348|ENST00000687698|USP54	nc|ENSG00000166348|Q70EL1-4|USP54	nc|ENSG00000166348|Q70EL1-4|USP54	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1918212771416	2	533.802571	1065.59059	1.696	0.00090533	-2.2199	-0.001185	-0.52394	-0.00027968	533.8013670265108	58.356	0.18725	60.325	60.214	60.401	1.969					8	5	2	0	0	0	2.3239	1	24474	24474		10.183	0.83596	1	631570			19312	3896	9315	9354	22349	22349					0.060418231445055426
LLMTLIVIM	9	Unmodified	_LLMTLIVIM_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.8223144412041	2	523.82125	1045.62795	2.1548	0.0011287	-1.5424	-0.00080796	0.6124	0.00032079	523.8202258152819	80.938	1.0776	81.229	80.655	81.732	0.29056					78	34	3	0	0	0	0.82604	2	33702	33702;33841		2.3027	0	1	2133500	+		19313	14480	9316	9355	22350;22351	22350					0.10695733575198574
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	994.5127441287041	1	994.512525	993.505248	1.9747	0.0019638	0.079177	7.8743E-05	2.0539	0.0020426	994.5124630895759	51.455	0.27807	51.455	51.261	51.539	0					15	8	2	0	0	0	0.09539	1	21446	21446		50.855	16.753	1	823990			19314	4389	9317	9356	22352	22352					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	994.5114623904228	1	994.512525	993.505248	1.8896	0.0018792	-1.5987	-0.0015899	0.29092	0.00028932	994.5111013870858	51.007	0.283	51.335	51.197	51.48	0.32824					14	8	2	0	0	0	0.1735	2	21407	21343;21407		36.044	2.2772	1	606430			19315	4389	9317	9356	22353;22354	22354					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.7619201540947	2	497.759901	993.505248	2.3369	0.0011632	0.12219	6.0824E-05	2.4591	0.001224	497.7599767618236	51.047	0.31428	51.375	51.166	51.48	0.32824					23	9	3	0	0	0	0.09539	1	21400	21400		50.855	22.368	1	1854600			19316	4389	9317	9356	22355	22355					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7606994509697	2	497.759901	993.505248	2.2572	0.0011236	-0.95579	-0.00047576	1.3014	0.0006478	497.7595854552568	49.762	0.43559	51.153	50.888	51.324	1.3911					41	13	4	0	0	0	0.051699	2	20824	20776;20824		67.344	12.57	1	6579300			19317	4389	9317	9356	22356;22357	22357					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5142089724541	1	994.512525	993.505248	3.5362	0.0035168	-1.8995	-0.0018891	1.6367	0.0016277	994.5104080154063	49.728	0.40704	51.119	50.948	51.355	1.3911					29	12	3	0	0	0	0.00025648	2	20822	20822;20876		139.54	72.2	1	5102100			19318	4389	9317	9356	22358;22359	22358					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7606994509697	2	497.759901	993.505248	1.6408	0.00081672	-0.42611	-0.0002121	1.2147	0.00060462	497.7597798386279	49.251	0.49487	51.228	50.917	51.412	1.9772					43	15	4	0	0	0	0.03795	3	20627	20578;20627;20680		77.984	20.513	1	8045700			19319	4389	9317	9356	22360;22361;22362	22361					0.008235683774842073
LLMTSLTES	9	Unmodified	_LLMTSLTES_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5140258669853	1	994.512525	993.505248	2.2177	0.0022055	-0.80371	-0.0007993	1.414	0.0014062	994.5116255005762	49.227	0.34076	51.205	51.008	51.349	1.9772					22	10	3	0	0	0	0.006164	2	20628	20580;20628		117.6	50.255	1	4490100			19320	4389	9317	9356	22363;22364	22364					0.008235683774842073
LLMVDPLPLI	10	Unmodified	_LLMVDPLPLI_					0	0	0			REV__ENSG00000162771|ENST00000294829|GARIN4	REV__ENSG00000162771|ENST00000294829|GARIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3448364138603	2	562.343403	1122.67225	1.2973	0.0007295	1.0009	0.00056284	2.2981	0.0012923	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.89803	1	30102	30102		1.6526	1.6526	1	3980400	+		19321	10663	9318	9357	22365	22365					0.11582460993076893
LLMVKLHKQA	10	Unmodified	_LLMVKLHKQA_					0	0	0			REV__nc|nan|Q6UWU4-2|C6orf89	REV__nc|nan|Q6UWU4-2|C6orf89	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2469665408134	3	394.246005	1179.71618	2.6741	0.0010543	0.81715	0.00032216	3.4913	0.0013764	394.2462107237669	90.331	1.7877	90.541	90.017	91.805	0.20904					105	55	5	0	0	0	0.89803	1	37944	37944		0.69767	0.24315	1	33446000	+		19322	11722	9319	9358	22366	22366					0.1335149021003872
LLNCLLQL	8	Carbamidomethyl (C)	_LLNC(Carbamidomethyl (C))LLQL_	LLNC(1)LLQL		LLNC(50)LLQL		0	1	0		ENST00000313349.3_1_2:64861661-64861808:-|nuORF	ENST00000313349.3_1_2:64861661-64861808:-|nuORF	ENST00000313349.3_1_2:64861661-64861808:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7904540896416	2	493.788795	985.563038	3.2259	0.0015929	-2.1943	-0.0010835	1.0316	0.00050939	493.78659191599326	81.23	0.43376	82.463	82.284	82.718	1.2332					34	13	3	0	0	0	0.47134	1	34160	34160		49.669	7.5744	1	1453100			19323	5812	9320	9359	22367	22367	9				0.06967875093596376
LLNDHIYVV	9	Unmodified	_LLNDHIYVV_					0	0	0		ENSG00000117153|ENST00000367261|KLHL12;nc|ENSG00000117153|Q53G59-2|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	ENSG00000117153|ENST00000367261|KLHL12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3038207888603	2	543.303124	1084.5917	1.8209	0.00098928	2.5517	0.0013864	4.3726	0.0023756	543.3033027329034	49.095	0.44358	49.095	48.778	49.222	0					20	13	2	0	0	0	0.35391	1	20486	20486		22.736	8.8302	1	513090			19324	2000	9321	9360	22368	22368					0.05278315994382865
LLNDLRFR	8	Unmodified	_LLNDLRFR_					0	0	0			REV__ELAVL4|p.F332Sfs*14|1|0.04|ENSG00000162374|chr1:50201028-50201028|C/-|frameshift_variant	REV__ELAVL4|p.F332Sfs*14|1|0.04|ENSG00000162374|chr1:50201028-50201028|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8074218630791	2	523.808908	1045.60326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.609	1	97.866	97.366	98.366	0.25636								0	0	0	1.0178	1	41064	41064		23.148	1.4018	1		+		19325	8472	9322	9361	22369	22369					0.08228557808365622
LLNELLKPV	9	Unmodified	_LLNELLKPV_					0	0	0			REV__ENSG00000198678|ENST00000328207|OR5BS1P	REV__ENSG00000198678|ENST00000328207|OR5BS1P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1400634646416	2	519.831517	1037.64848	0.7428	0.00038613	0.19123	9.9407E-05	0.93403	0.00048554	519.8314681978319	56.98	0.20442	58.948	58.814	59.018	1.9684					9	6	2	0	0	0	0.11799	1	23846	23846		2.3027	0	1	2233000	+		19326	11724	9323	9362	22370	22370					0.13116363550898313
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.8323547244072	2	470.83132	939.648088	2.4488	0.001153	-0.18031	-8.4896E-05	2.2685	0.0010681	470.8313284055912	50.93	0.40471	51.258	50.95	51.354	0.32824					17	12	2	0	0	0	0.15741	1	21327	21327		85.357	7.3724	1	432660		+	19327	1724;342	9324	9363	22371	22371					0.17584988621706543
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	470.8315002322197	2	470.83132	939.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.682	1	51.073	50.573	51.573	1.3911								0	0	0	3.1194E-11	1	20799	20799		125.62	0	1			+	19328	1724;342	9324	9363	22372	22372					0.17584988621706543
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	470.8320190310478	2	470.83132	939.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.803	1	51.194	50.694	51.694	1.3911								0	0	0	1.9971E-08	1	20849	20849		112.59	0	1			+	19329	1724;342	9324	9363	22373	22373					0.17584988621706543
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_01	3	470.8314086794853	2	470.83132	939.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.929	1	51.32	50.82	51.82	1.3911								0	0	0	5.8615E-07	1	20901	20901		100.37	0	1			+	19330	1724;342	9324	9363	22374	22374					0.17584988621706543
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.8331481814384	2	470.83132	939.648088	2.1044	0.00099081	0.12111	5.7023E-05	2.2255	0.0010478	470.8315198418833	49.178	0.93531	51.156	50.823	51.758	1.9772					40	29	2	0	0	0	0.070809	3	20529	20529;20579;20648		97.075	0	1	1364600		+	19331	1724;342	9324	9363	22375;22376;22377	22375					0.17584988621706543
LLNIKVKL	8	Unmodified	_LLNIKVKL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000534205.1_1_11:35881882-35882566:-|nuORF;ENST00000397031.2_1_2:182825941-182826409:-|nuORF;ENST00000585825.1_1_17:58888625-58888820:+|nuORF;ENST00000453838.2_1_1:182928211-182928406:-|nuORF;ENST00000513396.1_1_4:136292387-136292531:-|nuORF;CON__P05784	ENSG00000111057|ENST00000388835|KRT18;CON__P05784	ENSG00000111057|ENST00000388835|KRT18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	470.83132	939.648088	2.465	0.0011606	0.28288	0.00013319	2.7479	0.0012938	470.83143766058	51.43	0.46262	51.43	51.199	51.661	0	0.14891	0.00018889	NaN	97.075	16	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355250		+	19332	1724;342	9324	9363							0.17584988621706543
LLNITLRLLLN	11	Unmodified	_LLNITLRLLLN_					0	0	0		nc|ENSG00000075945|Q92845-4|KIFAP3;nc|ENSG00000075945|Q92845-2|KIFAP3;nc|ENSG00000075945|Q92845-3|KIFAP3;ENSG00000075945|ENST00000361580|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	nc|ENSG00000075945|Q92845-4|KIFAP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	432.8997985720634	3	432.618495	1294.83366	2.672	0.0011559	-1.5808	-0.00068389	1.0911	0.00047204	432.61814141903443	45.015	0.92278	46.381	45.9	46.822	1.3653					52	28	2	0	0	0	0.14606	1	18707	18707		2.6312	1.1761	1	4905900			19333	942	9325	9364	22378	22378					0.19803346350522588
LLNLFMKL	8	Unmodified	_LLNLFMKL_					0	0	0			REV__ENSG00000100226|ENST00000216044|GTPBP1	REV__ENSG00000100226|ENST00000216044|GTPBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3077880740166	2	496.304081	990.59361	2.4009	0.0011916	0.45009	0.00022338	2.851	0.001415	496.3049237884976	79.466	0.57237	79.766	79.527	80.1	0.30047					41	17	3	0	0	0	0.88409	1	33286	33286		6.3541	0	1	3598200	+		19334	8975	9326	9365	22379	22379					0.09793653478641318
LLNLQQKHHVL	11	Unmodified	_LLNLQQKHHVL_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2692138552666	3	448.269978	1341.7881	1.8776	0.00084165	-1.067	-0.0004783	0.81057	0.00036335	448.26935389825474	49.462	0.25164	51.439	51.318	51.569	1.9772					17	7	3	0	0	0	0.94603	1	20750	20750		7.0371	1.1689	1	1354200	+		19335	9453	9327	9366	22380	22380					0.13088120888119192
LLNLQQKHHVL	11	Unmodified	_LLNLQQKHHVL_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	448.269978	1341.7881	2.2427	0.0010053	-0.45466	-0.00020381	1.788	0.00080153	448.2702167937691	51.216	0.15519	51.544	51.48	51.636	0.32824	0.061073	0.00080557	NaN	7.0371	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433720	+		19336	9453	9327	9366							0.13088120888119192
LLNLQQKHHVL	11	Unmodified	_LLNLQQKHHVL_					0	0	0			REV__ENSG00000115760|ENST00000421745|BIRC6	REV__ENSG00000115760|ENST00000421745|BIRC6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	448.269978	1341.7881	2.8212	0.0012646	-1.5145	-0.0006789	1.3067	0.00058574	448.26966769583413	50.075	0.22496	51.467	51.355	51.58	1.3911	-0.016745	-0.00061971	NaN	7.0371	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1411300	+		19337	9453	9327	9366							0.13088120888119192
LLNLRLGEPV	10	Unmodified	_LLNLRLGEPV_					0	0	0			REV__ENST00000526748.1_1_14:75536435-75544319:+|nuORF	REV__ENST00000526748.1_1_14:75536435-75544319:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3451415896416	2	562.345323	1122.67609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.741	1	73.565	73.065	74.065	1.824								0	0	0	0.65773	1	30097	30097		7.2892	0	1		+		19338	13669	9328	9367	22381	22381					0.11966266811123205
LLNREEVTL	9	Unmodified	_LLNREEVTL_					0	0	0			REV__ENST00000489287.1_1_17:1268113-1303470:-|nuORF	REV__ENST00000489287.1_1_17:1268113-1303470:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8107177615166	2	543.811313	1085.60807	2.0601	0.0011203	-2.8792	-0.0015657	-0.81912	-0.00044544	543.809614767072	46.996	0.34891	48.379	48.219	48.567	1.3825					26	10	3	0	0	0	0.32838	1	19704	19704		24.021	3.5669	1	1439000	+		19339	9266	9329	9368	22382	22382					0.06869397160471635
LLNREEVTL	9	Unmodified	_LLNREEVTL_					0	0	0			REV__ENST00000489287.1_1_17:1268113-1303470:-|nuORF	REV__ENST00000489287.1_1_17:1268113-1303470:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8126708865166	2	543.811313	1085.60807	1.7916	0.00097432	-1.7442	-0.00094853	0.04742	2.5788E-05	543.809886010426	46.517	0.45644	48.488	48.315	48.771	1.9703					26	14	3	0	0	0	0.39927	1	19510	19510		20.454	0.039092	1	1569100	+		19340	9266	9329	9368	22383	22383					0.06869397160471635
LLNVCMRHV	9	Unmodified	_LLNVCMRHV_					0	0	0		TRIM29|p.D414N|1|0.03|ENSG00000137699|chr11:120125784-120125784|C/T|missense_variant;nc|ENSG00000137699|Q14134-2|TRIM29;ENSG00000137699|ENST00000341846|TRIM29	TRIM29|p.D414N|1|0.03|ENSG00000137699|chr11:120125784-120125784|C/T|missense_variant	TRIM29|p.D414N|1|0.03|ENSG00000137699|chr11:120125784-120125784|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.7944213747978	2	542.791346	1083.56814	3.2909	0.0017863	1.3977	0.00075868	4.6886	0.0025449	542.7922878082067	92.702	0.51194	93.98	93.748	94.26	1.277					21	15	2	0	0	0	0.76456	1	38989	38989		4.756	2.4533	1	367160			19341	2784	9330	9369	22384	22384					0.02969855684546019
LLPALPKTV	9	Unmodified	_LLPALPKTV_					0	0	0		ENSG00000166682|ENST00000299882|TMPRSS5	ENSG00000166682|ENST00000299882|TMPRSS5	ENSG00000166682|ENST00000299882|TMPRSS5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.8797180056572	3	317.879428	950.616454	-0.90787	-0.00028859	-2.2151	-0.00070413	-3.123	-0.00099273	317.8784783969625	16.518	0.34536	17.416	17.22	17.565	0.89794					31	16	2	0	0	0	0.847	1	6819	6819		0.96228	0	1	1881300			19342	3916	9331	9370	22385	22385					0.13916995867748483
LLPATTYEFE	10	Unmodified	_LLPATTYEFE_					0	0	0		ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	ENSG00000118492|ENST00000397944|ADGB	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	395.5037719607353	3	395.200895	1182.58086	1.8056	0.00071357	-1.7969	-0.00071015	0.0086401	3.4146E-06	395.2009106411245	46.148	0.16981	46.477	46.391	46.561	0.32899					10	5	2	0	0	0	0.12547	1	19379	19379		1.9064	0	1	287200			19343	2036	9332	9371	22386	22386					-0.003131311705828921
LLPDGTLLLLQ	11	Unmodified	_LLPDGTLLLLQ_					0	0	0		ENST00000533337.1_1_11:124766750-124767703:-|nuORF;nc|ENSG00000154133|Q8WZ75-2|ROBO4;ENSG00000154133|ENST00000306534|ROBO4	ENST00000533337.1_1_11:124766750-124767703:-|nuORF	ENST00000533337.1_1_11:124766750-124767703:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2500488162041	3	399.248068	1194.72238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.04	1	10.785	10.285	11.285	0.74462								0	0	0	0.63775	1	4179	4179		0.50596	0.23694	1				19344	3376	9333	9372	22387	22387					0.1328028692259977
LLPDIKLLL	9	Unmodified	_LLPDIKLLL_					0	0	0			REV__ENSG00000169288|ENST00000315567|MRPL1	REV__ENSG00000169288|ENST00000315567|MRPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.3526489138603	2	519.352086	1036.68962	2.0769	0.0010787	-0.8198	-0.00042576	1.2571	0.0006529	519.3516215200924	76.121	0.6454	76.121	75.852	76.497	0					59	20	4	0	0	0	0.045797	1	31726	31726		71.134	9.7761	1	32551000	+		19345	10941	9334	9373	22388	22388					0.1727412459038078
LLPDIKLLL	9	Unmodified	_LLPDIKLLL_					0	0	0			REV__ENSG00000169288|ENST00000315567|MRPL1	REV__ENSG00000169288|ENST00000315567|MRPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.3535644412041	2	519.352086	1036.68962	2.6102	0.0013556	-0.42508	-0.00022077	2.1851	0.0011349	519.3518860416787	75.467	0.68972	75.788	75.519	76.209	0.32163					60	21	4	0	0	0	0.026628	2	31512	31512;31588		92.822	20.256	1	31708000	+		19346	10941	9334	9373	22389;22390	22389					0.1727412459038078
LLPDIKLLL	9	Unmodified	_LLPDIKLLL_					0	0	0			REV__ENSG00000169288|ENST00000315567|MRPL1	REV__ENSG00000169288|ENST00000315567|MRPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3535644412041	2	519.352086	1036.68962	2.9511	0.0015327	0.6443	0.00033462	3.5954	0.0018673	519.3524444025021	73.724	1.0509	75.52	75.224	76.275	1.7962					85	33	5	0	0	0	0.033794	1	30900	30900		81.613	2.885	1	63357000	+		19347	10941	9334	9373	22391	22391					0.1727412459038078
LLPDKWFDI	9	Unmodified	_LLPDKWFDI_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8149291872978	2	573.813325	1145.6121	3.2802	0.0018822	-2.1436	-0.00123	1.1367	0.00065224	573.8125554903412	74.458	0.3877	75.776	75.561	75.948	1.318					30	12	3	0	0	0	0.17276	1	31233	31233		36.127	11.453	1	3608200			19348	3763	9335	9374	22392	22392					0.04511486654178043
LLPDKWFDI	9	Unmodified	_LLPDKWFDI_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	573.813325	1145.6121	3.0558	0.0017535	-1.5227	-0.00087377	1.5331	0.00087972	573.8125911592111	73.936	0.39244	75.733	75.536	75.929	1.7962	-0.0215	0.00032442	NaN	36.127	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2693300			19349	3763	9335	9374							0.04511486654178043
LLPDYYLVTV	10	Unmodified	_LLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	598.3377563357353	2	598.33409	1194.65363	2.4528	0.0014676	2.3111	0.0013828	4.7639	0.0028504	598.3346562326913	82.17	0.30042	82.17	81.977	82.277	0					15	9	2	0	0	0	0.65574	1	34200	34200		20.454	8.8133	1	1238100			19350	4985	9336	9375	22393	22393					0.0640862262284827
LLPDYYLVTV	10	Unmodified	_LLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	598.3358642458916	2	598.33409	1194.65363	1.9883	0.0011896	2.8627	0.0017129	4.851	0.0029025	598.3355794815758	81.704	0.33948	81.984	81.781	82.12	0.2802					16	10	2	0	0	0	0.51515	1	34144	34144		26.884	6.4691	1	794870			19351	4985	9336	9375	22394	22394					0.0640862262284827
LLPDYYLVTV	10	Unmodified	_LLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.3356811404228	2	598.33409	1194.65363	2.7945	0.001672	1.5169	0.00090761	4.3114	0.0025796	598.3347008229819	80.701	0.29957	81.934	81.771	82.07	1.2332					19	9	3	0	0	0	0.41677	1	33863	33863		32.305	8.2849	1	1999700			19352	4985	9336	9375	22395	22395					0.0640862262284827
LLPDYYLVTV	10	Unmodified	_LLPDYYLVTV_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3331176638603	2	598.33409	1194.65363	1.2522	0.00074921	-0.59544	-0.00035627	0.65672	0.00039294	598.3335643220917	80.217	0.29304	81.933	81.848	82.141	1.7167					15	9	2	0	0	0	0.41677	2	33663	33663;33715		32.305	7.6316	1	1544200			19353	4985	9336	9375	22396;22397	22396					0.0640862262284827
LLPEWMDA	8	Unmodified	_LLPEWMDA_					0	0	0		sp|F5HF35|UL136_HCMVMProteinUL136OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL136PE=1SV=1	sp|F5HF35|UL136_HCMVMProteinUL136OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL136PE=1SV=1	sp|F5HF35|UL136_HCMVMProteinUL136OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL136PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7381164431572	2	487.736228	973.457904	1.7509	0.00085397	0.10815	5.2748E-05	1.859	0.00090671	487.7363829122877	43.103	0.49236	43.103	42.999	43.491	0					25	15	2	0	0	0	0.87935	1	18051	18051		9.3474	0.75416	1	631540			19354	15980	9337	9376	22398	22398					-0.02988666102839943
LLPFPLITV	9	Unmodified	_LLPFPLITV_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8253661990166	2	506.825704	1011.63685	2.1279	0.0010785	-2.7652	-0.0014015	-0.63733	-0.00032301	506.824388946471	46.423	0.27541	46.423	46.261	46.536	0					14	8	2	0	0	0	0.3154	1	19386	19386		24.674	0	1	956030			19355	3927	9338	9377	22399	22399					0.1315016652755503
LLPGKLALAA	10	Unmodified	_LLPGKLALAA_					0	0	0			REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.3194152712822	2	483.820953	965.627353	1.3338	0.0006453	-0.99129	-0.00047961	0.34247	0.0001657	483.8206399351755	100.37	0.24673	100.37	100.29	100.54	0					10	7	2	0	0	0	0.12561	1	42018	42018		0	0	1	4652500	+		19356	11609	9339	9378	22400	22400					0.14316398241999195
LLPHPPLLI	9	Unmodified	_LLPHPPLLI_					0	0	0			REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|6|1|sense	REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|6|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8327514529228	2	506.83132	1011.64809	3.5091	0.0017785	-0.34423	-0.00017447	3.1648	0.001604	506.8312483916763	81.331	0.5227	83.027	82.86	83.383	1.6959					37	16	3	0	0	0	0.08022	1	34095	34095		56.048	10.298	1	3061000	+		19357	14207	9340	9379	22401	22401					0.14272988621712557
LLPKFRSL	8	Unmodified	_LLPKFRSL_					0	0	0			REV__ENSG00000198944|ENST00000378693|SOWAHA	REV__ENSG00000198944|ENST00000378693|SOWAHA	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.3137390017509	2	487.313295	972.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.176	1	55.146	54.646	55.646	1.9697								0	0	0	1.0178	1	22278	22278		26.341	3.1929	1		+		19358	11758	9341	9380	22402	22402					0.12463531444836917
LLPKGKQSI	9	Unmodified	_LLPKGKQSI_					0	0	0		ENSG00000111727|ENST00000229330|HCFC2	ENSG00000111727|ENST00000229330|HCFC2	ENSG00000111727|ENST00000229330|HCFC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3162414431572	2	492.316035	982.617516	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.53	103.03	104.03	0.18066								0	0	0	0.42693	1	43507	43507		3.9444	0	1				19359	1753	9342	9381	22403	22403					0.12551210236654242
LLPKKPTA	8	Unmodified	_LLPKKPTA_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-4|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	867.5684081912041	1	867.566215	866.558939	2.7949	0.0024247	-0.81857	-0.00071016	1.9763	0.0017146	867.5652201989785	107.79	0.19653	107.84	107.73	107.93	0.052452					42	10	5	0	0	0	0.89178	1	46157	46157		0.69038	0	1	374810000			19360	682	9343	9382	22404	22404					0.12032153662164546
LLPKKPTA	8	Unmodified	_LLPKKPTA_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-4|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	867.5678588747978	1	867.566215	866.558939	3.1284	0.0027141	-0.55989	-0.00048574	2.5685	0.0022283	867.5654089578642	106.13	0.12495	106.29	106.24	106.36	0.16174					17	6	3	0	0	0	0.89178	1	45320	45320		0.69038	0	1	56081000			19361	682	9343	9382	22405	22405					0.12032153662164546
LLPKKPTA	8	Unmodified	_LLPKKPTA_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-4|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2879211306572	2	434.286746	866.558939	3.3158	0.00144	-0.75181	-0.0003265	2.564	0.0011135	434.2864365637799	106.14	0.37048	106.3	106.07	106.44	0.16174					47	19	5	0	0	0	0.89178	1	45377	45377		0.69038	0	1	519590000			19362	682	9343	9382	22406	22406					0.12032153662164546
LLPKKPTA	8	Unmodified	_LLPKKPTA_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4;nc|ENSG00000047849|P27816-4|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	867.5676757693291	1	867.566215	866.558939	3.1265	0.0027125	-2.0246	-0.0017565	1.1019	0.000956	867.5642758833161	107.73	0.25763	107.89	107.75	108.01	0.15795					50	13	5	0	0	0	0.89178	1	46317	46317		0.69038	0	1	5463500000			19363	682	9343	9382	22407	22407					0.12032153662164546
LLPLKFFPI	9	Unmodified	_LLPLKFFPI_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-4|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3524658083916	2	544.349346	1086.68414	5.1355	0.0027955	2.8263	0.0015385	7.9619	0.004334	544.3504400598284	88.04	0.28645	89.097	88.922	89.208	1.0562					13	8	2	0	0	0	0.34572	1	37137	37137		23.148	5.0134	1	603200			19364	253	9344	9383	22408	22408					0.14426445798562781
LLPLKFFPI	9	Unmodified	_LLPLKFFPI_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-4|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3536865115166	2	544.349346	1086.68414	4.6785	0.0025467	3.4287	0.0018664	8.1072	0.0044131	544.3507474668555	87.536	0.31657	89.031	88.888	89.204	1.4953					13	9	2	0	0	0	0.34572	1	36912	36912		23.148	5.0134	1	682420			19365	253	9344	9383	22409	22409					0.14426445798562781
LLPLKLLQL	9	Unmodified	_LLPLKLLQL_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.8702270388603	2	525.867903	1049.72125	2.6738	0.0014061	1.2898	0.00067826	3.9636	0.0020843	525.8684154836583	84.448	0.25676	84.709	84.565	84.822	0.26083					12	7	2	0	0	0	0.37357	1	35327	35327		21.747	1.293	1	641120			19366	5349	9345	9384	22410	22410					0.19838117344329476
LLPLKLLQL	9	Unmodified	_LLPLKLLQL_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.7853881716728	2	525.867903	1049.72125	1.9818	0.0010422	0.11038	5.8047E-05	2.0922	0.0011002	525.8676829221986	83.478	0.34338	84.666	84.484	84.827	1.1879					23	10	3	0	0	0	0.0077292	1	35012	35012		67.344	0	1	2459900			19367	5349	9345	9384	22411	22411					0.19838117344329476
LLPLKLLQL	9	Unmodified	_LLPLKLLQL_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.7862426638603	2	525.867903	1049.72125	2.4288	0.0012772	-1.5025	-0.0007901	0.92637	0.00048715	525.8666699005382	82.935	0.37569	84.605	84.415	84.79	1.67					23	11	3	0	0	0	0.060741	1	34762	34762		42.095	4.1206	1	2240200			19368	5349	9345	9384	22412	22412					0.19838117344329476
LLPLKPHHA	9	Unmodified	_LLPLKPHHA_					0	0	0			REV__ENST00000467237.5_1_7:150776633-150777020:-|nuORF	REV__ENST00000467237.5_1_7:150776633-150777020:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.5471679568291	3	342.546671	1024.61818	-0.16633	-5.6975E-05	2.8717	0.00098368	2.7053	0.0009267	342.5476261997007	27.534	0.37107	28.813	28.658	29.029	1.2789					22	11	2	0	0	0	0.66839	1	11593	11593		5.2969	0.96765	1	1079800	+		19369	13244	9346	9385	22413	22413					0.10686049676360199
LLPLMKQG	8	Unmodified	_LLPLMKQG_					0	0	0			REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2752258181572	2	450.272781	898.531009	3.1351	0.0014117	0.080038	3.6039E-05	3.2152	0.0014477	450.2731883205073	87.091	0.6082	87.335	87.102	87.71	0.24387					45	22	3	0	0	0	0.89176	1	36549	36549		0.79363	0.10326	1	6894900	+		19370	10647	9347	9386	22414	22414					0.07768507410446546
LLPLMKQG	8	Unmodified	_LLPLMKQG_					0	0	0			REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	450.1761657595634	2	450.272781	898.531009	3.1294	0.0014091	-0.85748	-0.0003861	2.2719	0.001023	450.27263730790816	86.604	0.76884	86.848	86.333	87.102	0.24387					57	28	3	0	0	0	2.3239	1	36040	36040		0.79363	0	1	8508100	+		19371	10647	9347	9386	22415	22415					0.07768507410446546
LLPLMKQG	8	Unmodified	_LLPLMKQG_					0	0	0			REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	REV__nc|ENSG00000162571|Q6ZVT0-2|TTLL10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2731811404228	2	450.272781	898.531009	3.8579	0.0017371	1.8966	0.000854	5.7545	0.0025911	450.2733523849093	86.504	1.2619	87.631	87.416	88.678	1.1265					65	44	2	0	0	0	0.89176	1	36708	36708		0.79363	0.10326	1	2947000	+		19372	10647	9347	9386	22416	22416					0.07768507410446546
LLPLPHHLL	9	Unmodified	_LLPLPHHLL_					0	0	0		nc|ENSG00000263155|P0CAP1-9|MYZAP	nc|ENSG00000263155|P0CAP1-9|MYZAP	nc|ENSG00000263155|P0CAP1-9|MYZAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8347656130791	2	526.834394	1051.65424	3.9435	0.0020775	-1.8806	-0.00099078	2.0628	0.0010868	526.8335147350955	96.103	0.18707	96.524	96.414	96.601	0.4212					13	5	3	0	0	0	0.64949	1	40422	40422		9.3474	0	1	2953100			19373	8014	9348	9387	22417	22417					0.1304750685324052
LLPLVQQPPHP	11	Unmodified	_LLPLVQQPPHP_					0	0	0		ENST00000571595.5_1_17:1617240-1619595:-|nuORF	ENST00000571595.5_1_17:1617240-1619595:-|nuORF	ENST00000571595.5_1_17:1617240-1619595:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.3171874880791	2	619.866423	1237.71829	2.5085	0.0015549	3.7249	0.002309	6.2334	0.0038639	619.8683784580328	74.684	0.56763	76.465	76.163	76.73	1.7817					31	17	2	0	0	0	0.14606	1	31291	31291		13.042	2.2185	1	699130			19374	7396	9349	9388	22418	22418					0.10894242219501393
LLPLVVPLL	9	Unmodified	_LLPLVVPLL_					0	0	0			REV__nc|ENSG00000113273|P15848-2|ARSB	REV__nc|ENSG00000113273|P15848-2|ARSB	MSMS	GG20161007_CRH_Patient100_W632_02	4	326.2319213747978	3	326.23169	975.67324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.05	1	102.24	101.74	102.74	0.19076								0	0	0	0.42693	1	42913	42913		1.1933	0	1		+		19375	9378	9350	9389	22419	22419					0.18443043424269945
LLPLWGMRRAP	11	Unmodified	_LLPLWGMRRAP_					0	0	0			REV__ENSG00000173531|ENST00000449682|MST1	REV__ENSG00000173531|ENST00000449682|MST1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2586547732353	3	437.256904	1308.74888	3.4721	0.0015182	0.47774	0.0002089	3.9498	0.0017271	437.25671926980334	82.569	1.4094	83.781	83.099	84.508	1.2125					96	44	3	0	0	0	1.0388	1	34564	34564		0.50596	0	1	2113200	+		19376	11102	9351	9390	22420	22420					0.10685697332928612
LLPLWGMRRAP	11	Unmodified	_LLPLWGMRRAP_					0	0	0			REV__ENSG00000173531|ENST00000449682|MST1	REV__ENSG00000173531|ENST00000449682|MST1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2590209841728	3	437.256904	1308.74888	3.2933	0.00144	0.85126	0.00037222	4.1445	0.0018122	437.25701668159905	82.488	1.2799	84.158	83.295	84.574	1.67					72	40	2	0	0	0	1.0388	1	34328	34328		0.50596	0	1	2777200	+		19377	11102	9351	9390	22421	22421					0.10685697332928612
LLPNLPEKR	9	Unmodified	_LLPNLPEKR_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3322021365166	2	540.332216	1078.64988	1.4108	0.00076229	-1.7112	-0.00092459	-0.30037	-0.0001623	540.3312259445505	70.558	0.78256	70.88	70.647	71.429	0.32223					63	24	3	0	0	0	0.83753	1	29670	29670		1.8442	0.19162	1	2526700	+		19378	11577	9352	9391	22422	22422					0.1136999763964468
LLPNLPEKR	9	Unmodified	_LLPNLPEKR_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3336059451103	2	540.332216	1078.64988	1.695	0.00091584	-1.9973	-0.0010792	-0.30236	-0.00016338	540.3311474663974	71.38	1.2424	71.704	71.399	72.641	0.32359					68	38	2	0	0	0	0.83753	1	30127	30127		1.8442	0.19162	1	1742100	+		19379	11577	9352	9391	22423	22423					0.1136999763964468
LLPPGPRGE	9	Unmodified	_LLPPGPRGE_					0	0	0		ENST00000527372.6_2_17:27442431-27442830:-|nuORF	ENST00000527372.6_2_17:27442431-27442830:-|nuORF	ENST00000527372.6_2_17:27442431-27442830:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	467.7393981814384	2	468.269084	934.523616	2.0182	0.00094505	1.4883	0.00069693	3.5065	0.001642	468.2695918833373	49.686	0.28217	51.663	51.506	51.788	1.9772					12	8	2	0	0	0	0.1006	1	20768	20768		21.747	10.632	1	493480			19380	7136	9353	9392	22424	22424					0.05373491134366759
LLPPPSAPP	9	Unmodified	_LLPPPSAPP_					0	0	0		ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	ENSG00000166987|ENST00000355673|MBD6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1195556521416	2	444.763104	887.511654	0.78107	0.00034739	-0.56066	-0.00024936	0.22041	9.8031E-05	444.76302815331525	25.636	0.73585	27.353	27.089	27.825	1.7167					38	23	3	0	0	0	0.11333	1	10718	10718		8.5933	0	1	1175700			19381	3941	9354	9393	22425	22425					0.06339874391176181
LLPPSCPPQ	9	Unmodified	_LLPPSCPPQ_					0	0	0		ENST00000529542.1_1_19:46825061-46834596:+|nuORF	ENST00000529542.1_1_19:46825061-46834596:+|nuORF	ENST00000529542.1_1_19:46825061-46834596:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1998474001884	2	476.252046	950.489538	2.6246	0.00125	-3.725	-0.0017741	-1.1004	-0.00052407	476.24889698524913	50.344	0.75116	51.738	51.326	52.078	1.3938					51	23	3	0	0	0	0.11645	1	20950	20950		4.756	1.8668	1	1327500			19382	7154	9355	9394	22426	22426					0.012313266511114307
LLPQKEEPL	9	Unmodified	_LLPQKEEPL_					0	0	0			REV__TTC12-TYR|1|fusion	REV__TTC12-TYR|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1923095583916	2	533.810782	1065.60701	1.9658	0.0010494	-0.73883	-0.0003944	1.2269	0.00065496	533.8104893143944	58.705	0.12866	58.705	58.623	58.752	0					5	3	2	0	0	0	0.11812	1	24485	24485		2.0598	1.535	1	286020	+		19383	8781	9356	9395	22427	22427					0.07683182791561194
LLPREFRLVEV	11	Unmodified	_LLPREFRLVEV_					0	0	0		nc|ENSG00000119760|O94864-2|SUPT7L;ENSG00000119760|ENST00000337768|SUPT7L	nc|ENSG00000119760|O94864-2|SUPT7L	nc|ENSG00000119760|O94864-2|SUPT7L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.9114868044853	2	685.911362	1369.80817	2.9336	0.0020122	-1.7387	-0.0011926	1.1949	0.00081962	685.9100878810526	82.069	0.56889	83.739	83.575	84.144	1.67					29	17	2	0	0	0	1.0174	1	34472	34472		2.7352	1.0826	1	1282700			19384	2081	9357	9396	22428	22428					0.13805871828071759
LLPRLWDN	8	Unmodified	_LLPRLWDN_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.1488830447197	3	342.862548	1025.56581	0.68786	0.00023584	0.27399	9.394E-05	0.96185	0.00032978	342.8628960323303	30.355	0.4984	30.64	30.322	30.82	0.2859					49	16	4	0	0	0	2.3239	1	12681	12681		0.35063	0.35063	1	5512100			19385	6669	9358	9397	22429	22429					0.05405466542742943
LLPRLWDN	8	Unmodified	_LLPRLWDN_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.1490661501884	3	342.862548	1025.56581	0.70807	0.00024277	0.42595	0.00014604	1.134	0.00038881	342.8629145500178	30.716	0.38558	31.002	30.79	31.176	0.2859					33	12	4	0	0	0	2.3239	1	12825	12825		0.35063	0.35063	1	4253700			19386	6669	9358	9397	22430	22430					0.05405466542742943
LLPRLWDN	8	Unmodified	_LLPRLWDN_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	342.1489440798759	3	342.862548	1025.56581	0.30657	0.00010511	0.15529	5.3243E-05	0.46186	0.00015835	342.86261715793955	29.42	0.45585	31.218	31.051	31.506	1.7987					36	14	4	0	0	0	2.3239	1	12279	12279		0.35063	0.35063	1	8784800			19387	6669	9358	9397	22431	22431					0.05405466542742943
LLPRVLRLM	9	Unmodified	_LLPRVLRLM_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;ENST00000477648.1_1_9:103064475-103066198:-|nuORF	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1015502810478	3	370.910845	1109.71071	1.2804	0.00047493	-0.81879	-0.0003037	0.46166	0.00017124	370.90974783111477	44.059	0.53794	45.413	45.254	45.792	1.3536					30	16	3	0	0	0	0.11891	1	18480	18480		1.1933	0	1	2403000			19388	2747	9359	9398	22432	22432					0.16023811418222067
LLPSDDSDE	9	Unmodified	_LLPSDDSDE_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7187377810478	2	495.716744	989.418936	1.4761	0.00073171	1.619	0.00080259	3.0951	0.0015343	495.7181626852772	43.128	0.65427	43.128	43.028	43.682	0					23	20	2	0	0	0	0.70108	1	18171	18171		7.2892	2.0586	1	379010	+		19389	11673	9360	9399	22433	22433					-0.07619719923513912
LLPSDDSDE	9	Unmodified	_LLPSDDSDE_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7191955447197	2	495.716744	989.418936	1.8729	0.00092841	1.0544	0.0005227	2.9273	0.0014511	495.7176639203716	42.12	1.1242	43.46	43.141	44.265	1.3399					79	35	3	0	0	0	0.59203	4	17615	17615;17667;17719;17852		11.64	0	1	1803400	+		19390	11673	9360	9399	22434;22435;22436;22437	22434					-0.07619719923513912
LLPSDDSDE	9	Unmodified	_LLPSDDSDE_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.2515746951103	2	495.716744	989.418936	1.8729	0.00092841	1.0544	0.0005227	2.9273	0.0014511	495.7176639203716	42.12	1.1242	43.46	43.141	44.265	1.3399					79	35	3	0	0	0	0.11518	1	17706	17706		11.64	0	1	1803400	+		19391	11673	9360	9399	22438	22438					-0.07619719923513912
LLPSDDSDE	9	Unmodified	_LLPSDDSDE_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7177917361259	2	495.716744	989.418936	1.7372	0.00086114	0.39095	0.0001938	2.1281	0.0010549	495.71738626088904	41.858	1.3656	43.75	43.269	44.635	1.8927					71	43	3	0	0	0	0.59203	4	17447	17447;17495;17589;17641		11.64	0	1	1713100	+		19392	11673	9360	9399	22439;22440;22441;22442	22439					-0.07619719923513912
LLPSDDSDE	9	Unmodified	_LLPSDDSDE_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	495.716744	989.418936	1.4761	0.00073171	1.619	0.00080259	3.0951	0.0015343	495.7181626852772	43.128	0.65427	43.128	43.028	43.682	0	-0.1662	0.00029184	NaN	11.64	23	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	379010	+		19393	11673	9360	9399							-0.07619719923513912
LLPSPVLLW	9	Unmodified	_LLPSPVLLW_					0	0	0			REV__tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	REV__tr|A0A553SG59|A0A553SG59_NIACITIGR01777familyproteinOS=NialliacirculansOX=1397GN=CEQ21_10240PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1393920779228	2	519.323328	1036.6321	1.8096	0.00093976	0.67793	0.00035206	2.4875	0.0012918	519.3235837698812	69.64	0.28712	69.64	69.483	69.77	0					15	8	2	0	0	0	0.116	1	29017	29017		9.3474	6.77	1	451230	+		19394	14733	9361	9400	22443	22443					0.11525282384786806
LLPSRPRAER	10	Unmodified	_LLPSRPRAER_					0	0	0		nc|ENSG00000178226|Q5K4E3-2|PRSS36;nc|ENSG00000178226|Q5K4E3-3|PRSS36;ENSG00000178226|ENST00000268281|PRSS36	nc|ENSG00000178226|Q5K4E3-2|PRSS36	nc|ENSG00000178226|Q5K4E3-2|PRSS36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8573486208916	2	597.856921	1193.69929	2.2076	0.0013198	-1.2712	-0.00076	0.93636	0.00055981	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.89803	1	31251	31251		1.1933	0.66858	1	2856000			19395	4479	9362	9401	22444	22444					0.11018705648439209
LLPSRPRAER	10	Unmodified	_LLPSRPRAER_					0	0	0		nc|ENSG00000178226|Q5K4E3-2|PRSS36;nc|ENSG00000178226|Q5K4E3-3|PRSS36;ENSG00000178226|ENST00000268281|PRSS36	nc|ENSG00000178226|Q5K4E3-2|PRSS36	nc|ENSG00000178226|Q5K4E3-2|PRSS36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8580200076103	2	597.856921	1193.69929	2.2016	0.0013163	-1.1327	-0.0006772	1.0689	0.00063905	597.8559694989469	75.998	0.74963	75.998	75.566	76.316	0					47	23	3	0	0	0	0.88022	1	31489	31489		3.5965	0	1	1289900			19396	4479	9362	9401	22445	22445					0.11018705648439209
LLPSRQFGF	9	Unmodified	_LLPSRQFGF_					0	0	0		ENST00000569365.6_1_16:18794333-18800349:-|nuORF;ENSG00000134419|ENST00000322989|RPS15A	ENST00000569365.6_1_16:18794333-18800349:-|nuORF	ENST00000569365.6_1_16:18794333-18800349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7988769412041	2	532.798009	1063.58147	2.4107	0.0012844	-0.64258	-0.00034237	1.7681	0.00094206	532.797545157049	47.62	0.63229	49.002	48.695	49.328	1.3825					49	19	3	0	0	0	0.19075	1	19965	19965		34.102	7.2188	1	5685100			19397	2614	9363	9402	22446	22446					0.05221753059799994
LLPSRQFGF	9	Unmodified	_LLPSRQFGF_					0	0	0		ENST00000569365.6_1_16:18794333-18800349:-|nuORF;ENSG00000134419|ENST00000322989|RPS15A	ENST00000569365.6_1_16:18794333-18800349:-|nuORF	ENST00000569365.6_1_16:18794333-18800349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7997924685478	2	532.798009	1063.58147	2.6478	0.0014107	0.36851	0.00019634	3.0163	0.0016071	532.7976598211809	47.133	0.8125	49.109	48.592	49.405	1.976					54	25	3	0	0	0	0.10993	1	19755	19755		46.021	4.1813	1	6316900			19398	2614	9363	9402	22447	22447					0.05221753059799994
LLPSSLCYV	9	Unmodified	_LLPSSLCYV_					0	0	0			REV__nc|ENSG00000139973|Q17RD7-4|SYT16	REV__nc|ENSG00000139973|Q17RD7-4|SYT16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7666198611259	2	497.767529	993.520504	3.2284	0.001607	-3.1991	-0.0015924	0.029353	1.4611E-05	497.7656493322491	82.212	0.40948	83.882	83.734	84.144	1.67					25	12	3	0	0	0	0.41943	1	34482	34482		19.439	2.4967	1	1326200	+		19399	14446	9364	9403	22448	22448					0.023484799653488153
LLPSSLCYV	9	Unmodified	_LLPSSLCYV_					0	0	0			REV__nc|ENSG00000139973|Q17RD7-4|SYT16	REV__nc|ENSG00000139973|Q17RD7-4|SYT16	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	497.767529	993.520504	2.1326	0.0010615	-3.4365	-0.0017106	-1.3039	-0.00064904	497.7656036606393	84.167	0.24697	84.167	84.028	84.275	0	0.19267	-0.00042465	NaN	19.439	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456280	+		19400	14446	9364	9403							0.023484799653488153
LLPSSLCYV	9	Unmodified	_LLPSSLCYV_					0	0	0			REV__nc|ENSG00000139973|Q17RD7-4|SYT16	REV__nc|ENSG00000139973|Q17RD7-4|SYT16	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.767529	993.520504	3.2284	0.001607	-3.1991	-0.0015924	0.029353	1.4611E-05	497.7656493322491	82.212	0.40948	83.882	83.734	84.144	1.67	-0.092402	-0.00018827	NaN	19.439	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1326200	+		19401	14446	9364	9403							0.023484799653488153
LLPSVFSSC	9	Unmodified	_LLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	952.4801513552666	1	952.480831	951.473554	1.7522	0.001669	-0.18037	-0.0001718	1.5718	0.0014971	952.4807377823774	43.279	0.86754	43.279	42.88	43.747	0					43	27	2	0	0	0	0.59203	5	18132	18026;18081;18132;18185;18260		11.64	2.2929	1	706090	+		19402	14152	9365	9404	22449;22450;22451;22452;22453	22451					-0.004123795857822188
LLPSVFSSC	9	Unmodified	_LLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	952.4844848513603	1	952.480831	951.473554	1.1672	0.0011118	0.75092	0.00071523	1.9182	0.001827	952.4816157853902	42.271	1.7313	43.61	43.11	44.841	1.3399					104	55	3	0	0	0	0.22519	8	17742	17592;17641;17691;17742;17783;17906;17958;18023		30.225	2.3606	1	2828300	+		19403	14152	9365	9404	22454;22455;22456;22457;22458;22459;22460;22461	22457					-0.004123795857822188
LLPSVFSSC	9	Unmodified	_LLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	952.4819213747978	1	952.480831	951.473554	1.9673	0.0018738	-0.45872	-0.00043692	1.5085	0.0014369	952.4805003417719	41.973	1.4867	43.894	43.324	44.811	1.9211					96	47	3	0	0	0	0.34572	7	17469	17469;17524;17576;17626;17680;17756;17823		23.148	2.3606	1	2849400	+		19404	14152	9365	9404	22462;22463;22464;22465;22466;22467;22468	22462					-0.004123795857822188
LLPSVFSSC	9	Unmodified	_LLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	952.480831	951.473554	1.7522	0.001669	-0.18037	-0.0001718	1.5718	0.0014971	952.4807377823774	43.279	0.86754	43.279	42.88	43.747	0	-0.16577	-0.00047457	NaN	30.225	43	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	706090	+		19405	14152	9365	9404							-0.004123795857822188
LLPSVFSSC	9	Unmodified	_LLPSVFSSC_					0	0	0			REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	REV__ENST00000609516.1_1_1:38148823-38149105:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	952.480831	951.473554	1.1672	0.0011118	0.75092	0.00071523	1.9182	0.001827	952.4816157853902	42.271	1.7313	43.61	43.11	44.841	1.3399	0.16577	0.00041246	NaN	30.225	104	55	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2828300	+		19406	14152	9365	9404							-0.004123795857822188
LLPSVRHGL	9	Unmodified	_LLPSVRHGL_					0	0	0			REV__nc|ENSG00000184321|Q9H342|OR51J1	REV__nc|ENSG00000184321|Q9H342|OR51J1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3067199587822	2	496.306001	990.597449	2.7399	0.0013598	-1.3295	-0.00065982	1.4104	0.00069999	496.305240494295	79.408	0.37431	80.659	80.488	80.863	1.2512					20	11	2	0	0	0	0.51832	1	33300	33300		14.582	3.4672	1	2948700	+		19407	14506	9366	9405	22469	22469					0.10177459296698999
LLPSVRHGL	9	Unmodified	_LLPSVRHGL_					0	0	0			REV__nc|ENSG00000184321|Q9H342|OR51J1	REV__nc|ENSG00000184321|Q9H342|OR51J1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	496.306001	990.597449	2.5178	0.0012496	-3.5482	-0.001761	-1.0303	-0.00051137	496.3039411794191	80.22	0.52987	80.521	80.258	80.788	0.30046	-0.079792	-0.00068206	NaN	14.582	46	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9685600	+		19408	14506	9366	9405							0.10177459296698999
LLPSVRHGL	9	Unmodified	_LLPSVRHGL_					0	0	0			REV__nc|ENSG00000184321|Q9H342|OR51J1	REV__nc|ENSG00000184321|Q9H342|OR51J1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	496.306001	990.597449	2.7399	0.0013598	-1.3295	-0.00065982	1.4104	0.00069999	496.305240494295	79.408	0.37431	80.659	80.488	80.863	1.2512	0.05846	0.0015202	NaN	14.582	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2948700	+		19409	14506	9366	9405							0.10177459296698999
LLPTRYYETA	10	Unmodified	_LLPTRYYETA_					0	0	0			REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.8259155154228	2	613.824421	1225.63429	1.7829	0.0010944	-0.56487	-0.00034673	1.218	0.00074765	613.8240706511202	62.381	0.12345	62.711	62.665	62.788	0.32974					5	3	2	0	0	0	0.79268	1	26148	26148		13.042	2.8919	1	266900	+		19410	11216	9367	9406	22470	22470					0.03049666331935441
LLPTRYYETA	10	Unmodified	_LLPTRYYETA_					0	0	0			REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	613.824421	1225.63429	1.7829	0.0010944	-0.56487	-0.00034673	1.218	0.00074765	613.8240706511202	62.381	0.12345	62.711	62.665	62.788	0.32974	0.022035	-0.00048765	NaN	13.042	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	266900	+		19411	11216	9367	9406							0.03049666331935441
LLPTRYYETA	10	Unmodified	_LLPTRYYETA_					0	0	0			REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	REV__nc|ENSG00000177414|Q5VVX9-2|UBE2U	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	613.824421	1225.63429	2.9184	0.0017914	0.15691	9.6317E-05	3.0753	0.0018877	613.8234359341014	61.249	0.33523	62.667	62.439	62.774	1.4177	-0.022035	0.00039844	NaN	13.042	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1428800	+		19412	11216	9367	9406							0.03049666331935441
LLPVVFALPP	10	Unmodified	_LLPVVFALPP_					0	0	0		nc|ENSG00000158296|Q8WWT9-2|SLC13A3;nc|ENSG00000158296|Q8WWT9-4|SLC13A3;nc|ENSG00000158296|Q8WWT9-5|SLC13A3;ENSG00000158296|ENST00000279027|SLC13A3	nc|ENSG00000158296|Q8WWT9-2|SLC13A3	nc|ENSG00000158296|Q8WWT9-2|SLC13A3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.3414794802666	2	533.338978	1064.6634	2.3274	0.0012413	1.4449	0.00077061	3.7723	0.0020119	533.3397627533795	83.98	0.74162	83.98	83.658	84.399	0					76	23	5	0	0	0	0.89803	1	35027	35027		0.45834	0	1	126590000			19413	3498	9368	9407	22471	22471					0.133658554188969
LLPVVLPLL	9	Unmodified	_LLPVVLPLL_					0	0	0		nc|ENSG00000113273|P15848-2|ARSB;ENSG00000113273|ENST00000264914|ARSB	nc|ENSG00000113273|P15848-2|ARSB	nc|ENSG00000113273|P15848-2|ARSB	MSMS	GG20161007_CRH_Patient100_W632_01	3	326.2323181033134	3	326.23169	975.67324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.1	1	102.27	101.77	102.77	0.17032								0	0	0	0.42693	1	42968	42968		1.1933	0	1				19414	1814	9369	9408	22472	22472					0.18443043424292682
LLPWLPKLL	9	Unmodified	_LLPWLPKLL_					0	0	0		ENST00000566243.5_2_15:74969356-74988325:-|nuORF;ENST00000568176.5_2_15:74967332-74988325:-|nuORF	ENST00000566243.5_2_15:74969356-74988325:-|nuORF	ENST00000566243.5_2_15:74969356-74988325:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.1130248904228	2	546.862621	1091.71069	0.81633	0.00044642	3.0243	0.0016539	3.8406	0.0021003	547.3655558739728	32.583	0.079651	34.408	34.366	34.446	1.8246					4	2	2	0	0	0	0.84963	1	13666	13666		0.6015	0	1	464750			19415	7361	9370	9409	22473	22473					0.16850134689889273
LLPWWLHL	8	Unmodified	_LLPWWLHL_					0	0	0		ENST00000454442.5_1_12:53565050-53565697:-|nuORF;ENST00000475890.5_1_12:53554625-53565697:-|nuORF	ENST00000454442.5_1_12:53565050-53565697:-|nuORF	ENST00000454442.5_1_12:53565050-53565697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3165771365166	2	539.315838	1076.61712	3.3666	0.0018156	-2.4691	-0.0013316	0.89752	0.00048405	539.3146721856845	93.781	0.52927	95.058	94.828	95.358	1.277					51	16	4	0	0	0	0.84707	1	39531	39531		17.087	2.5049	1	10377000			19416	6639	9371	9410	22474	22474					0.0818783530746714
LLQAPAALLH	10	Unmodified	_LLQAPAALLH_					0	0	0		ENST00000484979.5_1_13:58206389-58206503:+|nuORF	ENST00000484979.5_1_13:58206389-58206503:+|nuORF	ENST00000484979.5_1_13:58206389-58206503:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8207885622978	2	523.821484	1045.62842	2.162	0.0011325	-2.4513	-0.0012841	-0.28938	-0.00015158	523.8201995284138	81.044	0.98591	81.044	80.541	81.527	0					69	31	3	0	0	0	0.87699	1	33786	33786		3.9444	1.6417	1	1898400			19417	6852	9372	9411	22475	22475					0.10742612610920332
LLQAPAALLH	10	Unmodified	_LLQAPAALLH_					0	0	0		ENST00000484979.5_1_13:58206389-58206503:+|nuORF	ENST00000484979.5_1_13:58206389-58206503:+|nuORF	ENST00000484979.5_1_13:58206389-58206503:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	523.821484	1045.62842	2.1548	0.0011287	-1.9901	-0.0010425	0.16472	8.6284E-05	523.8202258152819	80.938	1.0776	81.229	80.655	81.732	0.29056	0.092462	0.0002446	NaN	3.9444	78	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2133500			19418	6852	9372	9411							0.10742612610920332
LLQAQVRFVKK	11	Unmodified	_LLQAQVRFVKK_					0	0	0			REV__ENST00000324166.6_1_2:88471665-88471776:+|nuORF	REV__ENST00000324166.6_1_2:88471665-88471776:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.9516174197197	3	443.950357	1328.82924	3.3922	0.001506	-2.0907	-0.00092816	1.3015	0.00057782	443.9493659122019	95.15	0.39565	95.552	95.314	95.709	0.40208					51	16	4	0	0	0	1.0357	1	40056	40056		1.4551	0.12547	1	6590500	+		19419	12422	9373	9412	22476	22476					0.17797881927572234
LLQARHEEGP	10	Unmodified	_LLQARHEEGP_					0	0	0			REV__ENST00000512291.5_1_17:48613811-48618261:+|nuORF	REV__ENST00000512291.5_1_17:48613811-48618261:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3027831912041	2	575.304187	1148.59382	1.428	0.00082151	0.12736	7.3268E-05	1.5553	0.00089478	575.30407593052	69.775	0.22247	69.775	69.675	69.897	0					11	6	2	0	0	0	0.87699	1	29045	29045		3.9444	0	1	513070	+		19420	13579	9374	9413	22477	22477					0.025467447321716463
LLQCECEN	8	Unmodified	_LLQCECEN_					0	0	0			REV__nc|ENSG00000125864|Q12934-2|BFSP1	REV__nc|ENSG00000125864|Q12934-2|BFSP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.1992065310478	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.286	1	44.639	44.139	45.139	1.3536								0	0	0	1.0178	1	18144	18144		5.7604	0.52976	1		+		19421	9683	9375	9414	22478	22478					-0.09342377256677992
LLQDIILQV	9	Unmodified	_LLQDIILQV_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.8323242068291	2	527.828975	1053.6434	3.5648	0.0018816	1.2223	0.00064516	4.7871	0.0025268	527.8296093263065	82.425	0.38376	83.638	83.505	83.889	1.2125					17	11	2	0	0	0	0.037761	1	34625	34625		78.149	15.577	1	1296100			19422	494	9376	9415	22479	22479					0.11872059688289482
LLQDIILQV	9	Unmodified	_LLQDIILQV_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.8334228396416	2	527.828975	1053.6434	3.7654	0.0019875	1.9746	0.0010422	5.74	0.0030297	527.8302105627429	82.038	0.3177	83.708	83.513	83.831	1.67					15	9	2	0	0	0	0.17276	2	34394	34394;34458		36.127	9.2434	1	1035300			19423	494	9376	9415	22480;22481	22480					0.11872059688289482
LLQDKQFEL	9	Unmodified	_LLQDKQFEL_					0	0	0		VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant;ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39;ENST00000570023.1_1_15:42465909-42470478:-|nuORF;ENST00000568029.5_1_15:42462052-42470793:-|nuORF	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3159667849541	2	567.313689	1132.61282	1.6458	0.00093369	-0.17592	-9.98E-05	1.4699	0.00083389	567.3141062796484	46.43	0.19177	46.759	46.655	46.846	0.32899					14	6	3	0	0	0	0.49082	1	19484	19484		15.847	0	1	346800			19424	3929	9377	9416	22482	22482					0.05182281303223135
LLQDKQFEL	9	Unmodified	_LLQDKQFEL_					0	0	0		VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant;ENSG00000166887|ENST00000318006|VPS39;nc|ENSG00000166887|Q96JC1|VPS39;ENST00000570023.1_1_15:42465909-42470478:-|nuORF;ENST00000568029.5_1_15:42462052-42470793:-|nuORF	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	VPS39|p.E652Gfs*5|1|0.17|ENSG00000166887|chr15:42164462-42164463|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	567.313689	1132.61282	1.6388	0.00092969	0.51245	0.00029072	2.1512	0.0012204	567.8155122514084	46.911	0.17855	46.911	46.812	46.99	0	0.075903	0.00028393	NaN	15.847	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481310			19425	3929	9377	9416							0.05182281303223135
LLQEIPKFRWE	11	Unmodified	_LLQEIPKFRWE_					0	0	0			REV__ENSG00000166295|ENST00000299381|ANAPC16	REV__ENSG00000166295|ENST00000299381|ANAPC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	730.4134399294853	2	729.908819	1457.80309	3.564	0.0026014	-1.1405	-0.00083245	2.4235	0.0017689	729.9078708898134	94.359	0.69218	95.101	94.826	95.519	0.74123					54	21	3	0	0	0	0.96769	1	39645	39645		5.7319	0	1	3523300	+		19426	10817	9378	9417	22483	22483					0.09249567965434835
LLQEQAMLLEC	11	Unmodified	_LLQEQAMLLEC_					0	0	0		nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;ENSG00000071054|ENST00000324219|MAP4K4	nc|ENSG00000071054|O95819|MAP4K4	nc|ENSG00000071054|O95819|MAP4K4	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8892089724541	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.106	1	27.368	26.868	27.868	0.26173								0	0	0	0.63775	1	11333	11333		0.094841	0	1				19427	864	9379	9418	22484	22484					0.002712160340479386
LLQGVRVAV	9	Unmodified	_LLQGVRVAV_					0	0	0		tr|A0A7D6VTN0|A0A7D6VTN0_9CLOTPTSmannose/fructose/sorbosetransportersubunitIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17550PE=4SV=1	tr|A0A7D6VTN0|A0A7D6VTN0_9CLOTPTSmannose/fructose/sorbosetransportersubunitIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17550PE=4SV=1	tr|A0A7D6VTN0|A0A7D6VTN0_9CLOTPTSmannose/fructose/sorbosetransportersubunitIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17550PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	478.1972839236259	2	477.808377	953.6022	1.4605	0.00069782	0.6855	0.00032754	2.146	0.0010254	477.8084882786157	54.685	0.19717	56.654	56.525	56.722	1.9684					9	6	2	0	0	0	0.116	1	22910	22910		9.3474	0	1	1091900			19428	16924	9380	9419	22485	22485					0.12354343439460536
LLQIARARTR	10	Unmodified	_LLQIARARTR_					0	0	0			REV__nc|ENSG00000155229|Q96T76-7|MMS19	REV__nc|ENSG00000155229|Q96T76-7|MMS19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3807861208916	2	599.380563	1196.74657	2.5993	0.001558	-2.1117	-0.0012657	0.48763	0.00029227	599.3792419137711	90.455	0.55378	90.455	90.193	90.746	0					64	17	5	0	0	0	0.88314	1	37781	37781		3.2813	0.28607	1	37409000	+		19429	10491	9381	9420	22486	22486					0.15606984919440947
LLQLPDCPA	9	Unmodified	_LLQLPDCPA_					0	0	0			REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2587768435478	2	485.257328	968.500103	1.8561	0.00090067	0.83439	0.00040489	2.6905	0.0013056	485.25761715407845	43.094	1.1832	43.094	42.819	44.002	0					67	37	2	0	0	0	0.66839	1	18328	18328		8.5933	0.68312	1	1234000	+		19430	13471	9382	9421	22487	22487					0.014593093055395912
LLQLPDCPA	9	Unmodified	_LLQLPDCPA_					0	0	0			REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	REV__ENST00000496720.1_1_22:50722364-50724624:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2587158083916	2	485.257328	968.500103	2.5378	0.0012315	0.70337	0.00034132	3.2411	0.0015728	485.25758593827635	42.981	0.86298	43.305	43.066	43.929	0.32389					47	27	2	0	0	0	0.75267	1	18212	18212		5.2307	0.47466	1	1386000	+		19431	13471	9382	9421	22488	22488					0.014593093055395912
LLQLRCLPVAR	11	Unmodified	_LLQLRCLPVAR_					0	0	0		nc|ENSG00000088682|O75208-2|COQ9;ENST00000566388.5_1_16:57481393-57486875:+|nuORF;ENST00000562426.5_1_16:57481417-57490911:+|nuORF;ENSG00000088682|ENST00000262507|COQ9	nc|ENSG00000088682|O75208-2|COQ9	nc|ENSG00000088682|O75208-2|COQ9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.7007324099541	4	321.201051	1280.7751	1.0717	0.00034423	-0.096953	-3.1141E-05	0.97476	0.00031309	321.20103641667356	40.682	0.4701	42.007	41.803	42.273	1.3254					49	14	4	0	0	0	0.14606	1	17037	17037		2.6312	0	1	42708000			19432	1105	9383	9422	22489	22489					0.1459396650434428
LLQPLLLLL	9	Unmodified	_LLQPLLLLL_					0	0	0		ENST00000596653.1_1_19:50865389-50868878:-|nuORF;ENSG00000131400|ENST00000253719|NAPSA	ENST00000596653.1_1_19:50865389-50868878:-|nuORF	ENST00000596653.1_1_19:50865389-50868878:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1431762576103	2	518.362453	1034.71035	2.9124	0.0015097	4.184	0.0021688	7.0964	0.0036785	518.3650198065156	100.02	0.095818	100.09	100.02	100.12	0.072716					4	2	2	0	0	0	0.11812	1	41868	41868		4.756	2.9118	1	402060			19433	2490	9384	9423	22490	22490					0.19438714970056026
LLQPLLLLL	9	Unmodified	_LLQPLLLLL_					0	0	0		ENST00000596653.1_1_19:50865389-50868878:-|nuORF;ENSG00000131400|ENST00000253719|NAPSA	ENST00000596653.1_1_19:50865389-50868878:-|nuORF	ENST00000596653.1_1_19:50865389-50868878:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	518.362453	1034.71035	1.4605	0.00075709	6.5293	0.0033845	7.9898	0.0041416	518.3661450264729	100.08	0.094177	100.08	100.04	100.13	0	-0.0051041	0.00025944	NaN	4.756	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1745600			19434	2490	9384	9423							0.19438714970056026
LLQPRWFKVH	10	Unmodified	_LLQPRWFKVH_					0	0	0			REV__nc|ENSG00000146828|Q9BXP2-2|SLC12A9	REV__nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2637206912041	3	441.927663	1322.76116	1.3208	0.00058368	1.4716	0.00065033	2.7923	0.001234	441.92819113380085	39.606	0.52311	39.606	39.297	39.82	0					40	16	3	0	0	0	0.89803	1	16521	16521		0.77653	0.14971	1	1002700	+		19435	10313	9385	9424	22491	22491					0.11269057067579524
LLQRQLFVH	9	Unmodified	_LLQRQLFVH_					0	0	0			REV__ENST00000444078.5_1_2:231774643-231775150:-|nuORF	REV__ENST00000444078.5_1_2:231774643-231775150:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1539184451103	3	385.232864	1152.67676	0.54727	0.00021083	-1.2178	-0.00046915	-0.67056	-0.00025832	385.56577200882003	55.473	0.43235	56.882	56.533	56.966	1.4099					24	14	2	0	0	0	0.11954	1	23208	23208		0.26902	0	1	1842400	+		19436	13098	9386	9425	22492	22492					0.10653106250833844
LLQYRRKILI	10	Unmodified	_LLQYRRKILI_					0	0	0			REV__tr|A0A553SRN1|A0A553SRN1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01315PE=4SV=1	REV__tr|A0A553SRN1|A0A553SRN1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01315PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2910644412041	3	439.290602	1314.84998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.521	1	94.798	94.298	95.298	1.277								0	0	0	0.66254	1	39351	39351		0.15932	0.01943	1		+		19437	15168	9387	9426	22493	22493					0.2051447230728627
LLRALIPNPR	10	Unmodified	_LLRALIPNPR_					0	0	0			REV__ENST00000509705.3_1_19:39390655-39398344:+|nuORF	REV__ENST00000509705.3_1_19:39390655-39398344:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2539245486259	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.012	1	29.787	29.287	30.287	1.7754								0	0	0	0.66254	1	11726	11726		0.15932	0.064481	1		+		19438	9148	9388	9427	22494	22494					0.16021368176279793
LLRATEAT	8	Unmodified	_LLRATEAT_					0	0	0		GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A;ENSG00000167491|ENST00000683918|GATAD2A	GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant	GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	874.4992553591728	1	874.499258	873.491981	1.1745	0.0010271	-1.0071	-0.00088073	0.16734	0.00014634	874.4981875907164	103.46	0.056366	103.46	103.43	103.48	0					4	2	2	0	0	0	0.89051	1	43432	43432		2.3027	0	1	112830000			19439	3972	9389	9428	22495	22495					0.05017498380402685
LLRATEAT	8	Unmodified	_LLRATEAT_					0	0	0		GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant;nc|ENSG00000167491|Q86YP4-2|GATAD2A;nc|ENSG00000167491|Q86YP4|GATAD2A;ENSG00000167491|ENST00000683918|GATAD2A	GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant	GATAD2A|p.R273Pfs*58|1|0.06|ENSG00000167491|chr19:19496106-19496107|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	874.5004150271416	1	874.499258	873.491981	2.7991	0.0024478	-1.6183	-0.0014152	1.1809	0.0010327	874.4978650896177	103.43	0.063293	103.49	103.46	103.52	0.059502					8	2	4	0	0	0	0.89051	1	43387	43387		2.3027	0	1	37291000			19440	3972	9389	9428	22496	22496					0.05017498380402685
LLRCYYFASQ	10	Unmodified	_LLRCYYFASQ_					0	0	0			REV__ENSG00000174373|ENST00000680220|RALGAPA1	REV__ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.8776733279228	3	421.877869	1262.61178	0.65148	0.00027484	-1.0738	-0.000453	-0.42229	-0.00017815	421.8774595263833	69.978	0.34613	69.978	69.803	70.149	0					20	10	2	0	0	0	0.88508	1	29110	29110		3.0723	0.44103	1	3806000	+		19441	11121	9390	9429	22497	22497					-0.009022563373264347
LLRDPRATHL	10	Unmodified	_LLRDPRATHL_					0	0	0		sp|P16761|PP85_HCMVAPhosphoprotein85OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL25PE=3SV=1;sp|F5HGJ4|PP85_HCMVMPhosphoprotein85OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL25PE=1SV=1	sp|P16761|PP85_HCMVAPhosphoprotein85OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL25PE=3SV=1	sp|P16761|PP85_HCMVAPhosphoprotein85OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL25PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.3511230349541	2	596.351471	1190.68839	2.6239	0.0015648	-2.2369	-0.001334	0.38701	0.0002308	596.3499722013424	97.545	0.12382	97.636	97.559	97.683	0.090881					5	3	2	0	0	0	0.89803	1	40821	40821		1.1933	0.59184	1	1558900			19442	15984	9391	9430	22498	22498					0.10067303274172446
LLREHQAGF	9	Unmodified	_LLREHQAGF_					0	0	0		nc|ENSG00000163673|Q9C098|DCLK3;ENSG00000163673|ENST00000636136|DCLK3	nc|ENSG00000163673|Q9C098|DCLK3	nc|ENSG00000163673|Q9C098|DCLK3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1630737185478	2	535.790715	1069.56688	4.1703	0.0022344	3.0678	0.0016437	7.2381	0.0038781	535.7918055608258	90.32	0.22472	91.686	91.607	91.831	1.366					9	6	2	0	0	0	0.11787	1	38018	38018		5.2307	0.90143	1	546540			19443	3712	9392	9431	22499	22499					0.0348768091164402
LLREHQDL	8	Unmodified	_LLREHQDL_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.W1154Cfs*31|1|0.18|ENSG00000137877|chr15:41878350-41878351|-/TA|frameshift_variant	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2820922732353	2	512.282723	1022.55089	1.847	0.0009462	-2.6261	-0.0013453	-0.77906	-0.0003991	512.2812344977598	70.845	0.18917	70.845	70.718	70.907	0					10	5	2	0	0	0	0.88055	1	29524	29524		8.5933	1.8701	1	365750			19444	2799	9393	9432	22500	22500					0.0405197467475773
LLREKVEFL	9	Unmodified	_LLREKVEFL_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.L707Tfs*5|1|0.59|ENSG00000082641|chr17:48059439-48059440|-/GA|frameshift_variant	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.9007751345634	3	382.900891	1145.68084	0.86803	0.00033237	-1.0449	-0.0004001	-0.17688	-6.7728E-05	382.9003693768894	38.462	0.26503	39.758	39.6	39.865	1.2961					15	8	3	0	0	0	0.57864	1	16138	16138		12.175	0	1	1687100			19445	1034	9394	9433	22501	22501					0.11383150953906807
LLREKVEFL	9	Unmodified	_LLREKVEFL_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1;NFE2L1|p.L707Tfs*5|1|0.59|ENSG00000082641|chr17:48059439-48059440|-/GA|frameshift_variant	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.9008056521416	3	382.900891	1145.68084	0.55284	0.00021168	-0.58544	-0.00022417	-0.032605	-1.2485E-05	382.9008252692697	37.792	0.24374	39.612	39.486	39.73	1.8202					11	7	2	0	0	0	0.50272	1	15880	15880		15.248	3.0078	1	1008700			19446	1034	9394	9433	22502	22502					0.11383150953906807
LLRFLFLGL	9	Unmodified	_LLRFLFLGL_					0	0	0		nc|ENSG00000149564|Q96AP7-2|ESAM;ENSG00000149564|ENST00000278927|ESAM	nc|ENSG00000149564|Q96AP7-2|ESAM	nc|ENSG00000149564|Q96AP7-2|ESAM	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	546.8257324099541	2	546.35242	1090.69029	1.6373	0.00089456	-3.0444	-0.0016633	-1.407	-0.00076874	546.350481822108	50.017	0.46261	51.994	51.696	52.159	1.9772					15	14	2	0	0	0	0.11645	1	20972	20972		4.756	0	1	447630			19447	3246	9395	9434	22503	22503					0.14856964030082054
LLRFQRRPHRR	11	Unmodified	_LLRFQRRPHRR_					0	0	0		ENST00000239223.3_1_5:172197224-172198187:-|nuORF	ENST00000239223.3_1_5:172197224-172198187:-|nuORF	ENST00000239223.3_1_5:172197224-172198187:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.6487304568291	3	512.314915	1533.92291	1.458	0.00074697	-1.5972	-0.00081826	-0.13914	-7.1284E-05	512.6483901035541	33.313	0.65537	33.61	33.369	34.024	0.29701					28	21	2	0	0	0	1.0388	1	14044	14044		0.50596	0.09769	1	694660			19448	5562	9396	9435	22504	22504					0.17731038873239413
LLRGIPAIIW	10	Unmodified	_LLRGIPAIIW_					0	0	0		tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1537658572197	3	384.581493	1150.72265	1.8506	0.00071172	0.80614	0.00031003	2.6568	0.0010217	384.9159131372894	63.399	0.094788	63.728	63.662	63.756	0.32929					4	2	2	0	0	0	0.12559	1	26566	26566		0.77653	0	1	101810			19449	16195	9397	9436	22505	22505					0.15331751433086538
LLRGIPAIIW	10	Unmodified	_LLRGIPAIIW_					0	0	0		tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	tr|A0A553SIF6|A0A553SIF6_NIACIAllantoinpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14775PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1530944705009	3	384.581493	1150.72265	0.22781	8.761E-05	1.6614	0.00063895	1.8892	0.00072656	384.5820667872345	28.951	0.78893	30.233	29.825	30.614	1.2825					44	25	2	0	0	0	0.12559	1	11989	11989		0.77653	0.50751	1	1543700			19450	16195	9397	9436	22506	22506					0.15331751433086538
LLRGLPDRL	9	Unmodified	_LLRGLPDRL_					0	0	0			REV__ENST00000270645.7_1_19:50046533-50046872:+|nuORF	REV__ENST00000270645.7_1_19:50046533-50046872:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8339721560478	2	526.832383	1051.65021	3.3481	0.0017639	-0.80686	-0.00042508	2.5412	0.0013388	526.8315615757318	94.087	0.38311	95.276	95.048	95.431	1.1887					25	11	3	0	0	0	0.66839	1	39559	39559		8.5933	0.68312	1	1519000	+		19451	12234	9398	9437	22507	22507					0.12645417359499334
LLRGPPVARA	10	Unmodified	_LLRGPPVARA_					0	0	0		ENSG00000146674|ENST00000613132|IGFBP3;nc|ENSG00000146674|P17936-2|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.0657226443291	3	350.557459	1048.65055	0.11694	4.0994E-05	-0.33337	-0.00011687	-0.21644	-7.5873E-05	350.5572000195875	18.045	0.28247	18.218	18.075	18.358	0.17285					12	9	2	0	0	0	0.12557	1	7531	7531		1.7423	0.54893	1	225770			19452	3159	9399	9438	22508	22508					0.1281683707936736
LLRGPPVARA	10	Unmodified	_LLRGPPVARA_					0	0	0		ENSG00000146674|ENST00000613132|IGFBP3;nc|ENSG00000146674|P17936-2|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.5575134158134	3	350.557459	1048.65055	-0.8142	-0.00028543	1.1999	0.00042063	0.38568	0.0001352	350.55784329845295	17.207	0.29347	18.105	17.933	18.227	0.89794					17	9	2	0	0	0	0.83529	2	7191	7132;7191		8.4443	5.7091	1	486550			19453	3159	9399	9438	22509;22510	22510					0.1281683707936736
LLRGPPVARA	10	Unmodified	_LLRGPPVARA_					0	0	0		ENSG00000146674|ENST00000613132|IGFBP3;nc|ENSG00000146674|P17936-2|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	ENSG00000146674|ENST00000613132|IGFBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.5573303103447	3	350.557459	1048.65055	-0.15565	-5.4563E-05	-0.53932	-0.00018906	-0.69497	-0.00024363	350.89146501925234	16.886	0.35342	18.188	17.97	18.324	1.3023					16	11	2	0	0	0	0.77494	1	7010	7010		14.957	7.3482	1	591110			19454	3159	9399	9438	22511	22511					0.1281683707936736
LLRGQRCF	8	Unmodified	_LLRGQRCF_					0	0	0			REV__nc|ENSG00000215912|A8MYJ7|TTC34	REV__nc|ENSG00000215912|A8MYJ7|TTC34	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.3101684451103	2	496.776554	991.538554	2.9985	0.0014896	-2.3998	-0.0011922	0.59866	0.0002974	496.7753797865152	74.947	0.12952	76.253	76.15	76.28	1.3063					6	3	2	0	0	0	2.3239	1	31443	31443		10.183	0	1	450790	+		19455	11869	9400	9439	22512	22512					0.04244659730716194
LLRHEDRPQRR	11	Unmodified	_LLRHEDRPQRR_					0	0	0		ENST00000485983.6_1_3:9079745-9122942:-|nuORF;nc|ENSG00000196220|O43295-3|SRGAP3;nc|ENSG00000196220|O43295-2|SRGAP3;ENSG00000196220|ENST00000383836|SRGAP3;ENST00000470951.5_1_3:9101821-9290635:-|nuORF	ENST00000485983.6_1_3:9079745-9122942:-|nuORF	ENST00000485983.6_1_3:9079745-9122942:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	738.4206420779228	2	738.41874	1474.82293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.057	1	95.246	94.746	95.746	1.1887								0	0	0	0.63775	1	39575	39575		2.9952	1.5133	1				19456	4923	9401	9440	22513	22513					0.10450756748764434
LLRHLDLSI	9	Unmodified	_LLRHLDLSI_					0	0	0		LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant;ENSG00000166159|ENST00000299194|LRTM2	LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant	LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.2842285037041	2	540.332216	1078.64988	1.7646	0.00095349	-0.98471	-0.00053207	0.77993	0.00042142	540.3319359797522	67.377	0.94784	67.7	67.366	68.313	0.32269					39	30	3	0	0	0	0.66839	1	28338	28338		8.5933	0	1	1096000			19457	3883	9402	9441	22514	22514					0.11369997639667417
LLRHMRERHFR	11	Unmodified	_LLRHMRERHFR_					0	0	0		ENST00000494955.1_1_20:44596076-44596721:-|nuORF;ZNF335|p.E297Rfs*10|1|0.09|ENSG00000198026|chr20:45967560-45967561|-/T|frameshift_variant;nc|ENSG00000198026|Q9H4Z2-2|ZNF335;ENSG00000198026|ENST00000322927|ZNF335	ENST00000494955.1_1_20:44596076-44596721:-|nuORF	ENST00000494955.1_1_20:44596076-44596721:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6986572146416	3	517.624761	1549.85245	1.177	0.00060924	-1.1274	-0.00058355	0.049627	2.5688E-05	517.6247229987498	56.217	1.0022	58.185	57.749	58.751	1.9684					55	32	2	0	0	0	0.14606	1	23401	23401		0.50596	0	1	1375500			19458	5037	9403	9442	22515	22515					0.0995199749324911
LLRHMRERHFR	11	Unmodified	_LLRHMRERHFR_					0	0	0		ENST00000494955.1_1_20:44596076-44596721:-|nuORF;ZNF335|p.E297Rfs*10|1|0.09|ENSG00000198026|chr20:45967560-45967561|-/T|frameshift_variant;nc|ENSG00000198026|Q9H4Z2-2|ZNF335;ENSG00000198026|ENST00000322927|ZNF335	ENST00000494955.1_1_20:44596076-44596721:-|nuORF	ENST00000494955.1_1_20:44596076-44596721:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.8134033083916	3	517.624761	1549.85245	4.3658	0.0022599	-0.61483	-0.00031825	3.751	0.0019416	517.6247792315326	90.414	1.512	91.78	90.449	91.961	1.366					76	47	2	0	0	0	0.14606	1	38155	38155		0.094841	0.011491	1	641270			19459	5037	9403	9442	22516	22516					0.0995199749324911
LLRHTLPVS	9	Unmodified	_LLRHTLPVS_					0	0	0			REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6251098513603	2	518.319109	1034.62366	1.9255	0.000998	-1.8354	-0.00095134	0.090027	4.6663E-05	518.3187439257645	67.262	1.2192	67.585	66.999	68.218	0.32269					71	39	3	0	0	0	0.11645	1	28294	28294		4.756	0	1	3564700	+		19460	11138	9404	9443	22517	22517					0.10773728468188892
LLRIDNNSN	9	Unmodified	_LLRIDNNSN_					0	0	0		tr|A0A7D7AG84|A0A7D7AG84_9CLOTVOCfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08160PE=4SV=1	tr|A0A7D7AG84|A0A7D7AG84_9CLOTVOCfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08160PE=4SV=1	tr|A0A7D7AG84|A0A7D7AG84_9CLOTVOCfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08160PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	529.3284179568291	2	529.783087	1057.55162	3.4453	0.0018253	2.0917	0.0011081	5.537	0.0029334	529.7842131713887	91.612	0.35324	92.939	92.797	93.15	1.3269					16	10	2	0	0	0	0.11071	1	38556	38556		10.824	5.5933	1	1052400			19461	17342	9405	9444	22518	22518					0.025147693238068314
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9440795779228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.544	1	12.544	12.044	13.044	0								0	0	0	0.6624	1	5191	5191		0.40072	0	1		+		19462	13433	9406	9445	22519	22519					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.406	1	13.406	12.906	13.906	0								0	0	0	0.6624	1	5555	5555		0.40072	0	1		+		19463	13433	9406	9445	22520	22520					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9436523318291	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.742	1	13.742	13.242	14.242	0								0	0	0	0.66166	1	5697	5697		1.6526	0	1		+		19464	13433	9406	9445	22521	22521					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9438354372978	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.052	1	14.052	13.552	14.552	0								0	0	0	0.6624	1	5828	5828		0.40072	0	1		+		19465	13433	9406	9445	22522	22522					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9439575076103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.359	1	14.359	13.859	14.859	0								0	0	0	0.66166	1	5957	5957		1.6526	0	1		+		19466	13433	9406	9445	22523	22523					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9449340701103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.257	1	15.257	14.757	15.757	0								0	0	0	0.6624	1	6333	6333		0.40072	0	1		+		19467	13433	9406	9445	22524	22524					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9429809451103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.375	1	16.375	15.875	16.875	0								0	0	0	0.66166	1	6798	6798		1.6526	0	1		+		19468	13433	9406	9445	22525	22525					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9448730349541	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.288	1	21.288	20.788	21.788	0								0	0	0	0.6624	1	8851	8851		0.40072	0	1		+		19469	13433	9406	9445	22526	22526					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9426147341728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.561	1	21.561	21.061	22.061	0								0	0	0	0.66166	1	8966	8966		1.6526	0	1		+		19470	13433	9406	9445	22527	22527					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.151	1	22.151	21.651	22.651	0								0	0	0	0.6624	1	9213	9213		0.40072	0	1		+		19471	13433	9406	9445	22528	22528					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9460937380791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.553	1	22.553	22.053	23.053	0								0	0	0	0.6624	1	9385	9385		0.40072	0	1		+		19472	13433	9406	9445	22529	22529					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9468261599541	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.361	1	23.361	22.861	23.861	0								0	0	0	0.6624	1	9737	9737		0.40072	0	1		+		19473	13433	9406	9445	22530	22530					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9466430544853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.608	1	23.608	23.108	24.108	0								0	0	0	0.66166	1	9843	9843		1.6526	0	1		+		19474	13433	9406	9445	22531	22531					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9470092654228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.371	1	24.371	23.871	24.871	0								0	0	0	0.6624	1	10164	10164		0.40072	0	1		+		19475	13433	9406	9445	22532	22532					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9455444216728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.627	1	24.627	24.127	25.127	0								0	0	0	0.66166	1	10272	10272		1.6526	0	1		+		19476	13433	9406	9445	22533	22533					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9445068240166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.05	1	25.05	24.55	25.55	0								0	0	0	0.6624	1	10452	10452		0.40072	0	1		+		19477	13433	9406	9445	22534	22534					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9442016482353	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.904	1	26.904	26.404	27.404	0								0	0	0	0.66166	1	11247	11247		1.6526	0	1		+		19478	13433	9406	9445	22535	22535					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9418823122978	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.05	1	27.05	26.55	27.55	0								0	0	0	0.66166	1	11309	11309		1.6526	0	1		+		19479	13433	9406	9445	22536	22536					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9436523318291	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.47	1	27.47	26.97	27.97	0								0	0	0	0.66166	1	11488	11488		1.6526	0	1		+		19480	13433	9406	9445	22537	22537					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9453613162041	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.635	1	27.635	27.135	28.135	0								0	0	0	0.66166	1	11559	11559		1.6526	0	1		+		19481	13433	9406	9445	22538	22538					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9465209841728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.752	1	27.752	27.252	28.252	0								0	0	0	0.66166	1	11609	11609		1.6526	0	1		+		19482	13433	9406	9445	22539	22539					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9504272341728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.385	1	41.385	40.885	41.885	0								0	0	0	0.66052	1	17328	17328		3.5965	1.9439	1		+		19483	13433	9406	9445	22540	22540					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9471923708916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.74	1	42.74	42.24	43.24	0								0	0	0	0.66166	1	17887	17887		1.6526	0	1		+		19484	13433	9406	9445	22541	22541					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456664919853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.752	1	44.752	44.252	45.252	0								0	0	0	0.66052	1	18728	18728		3.5965	1.9439	1		+		19485	13433	9406	9445	22542	22542					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.937	1	44.937	44.437	45.437	0								0	0	0	0.66052	1	18806	18806		3.5965	1.9439	1		+		19486	13433	9406	9445	22543	22543					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9443847537041	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.474	1	45.474	44.974	45.974	0								0	0	0	0.66052	1	19027	19027		3.5965	1.9439	1		+		19487	13433	9406	9445	22544	22544					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9437744021416	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.294	1	46.294	45.794	46.794	0								0	0	0	0.66166	1	19358	19358		1.6526	0	1		+		19488	13433	9406	9445	22545	22545					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9462158083916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.511	1	46.511	46.011	47.011	0								0	0	0	0.66052	1	19445	19445		3.5965	1.9439	1		+		19489	13433	9406	9445	22546	22546					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9437133669853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.82	1	46.82	46.32	47.32	0								0	0	0	0.66052	1	19569	19569		3.5965	1.9439	1		+		19490	13433	9406	9445	22547	22547					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454833865166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.081	1	47.081	46.581	47.581	0								0	0	0	0.66166	1	19675	19675		1.6526	0	1		+		19491	13433	9406	9445	22548	22548					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9463989138603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.479	1	47.479	46.979	47.979	0								0	0	0	0.66052	1	19837	19837		3.5965	1.9439	1		+		19492	13433	9406	9445	22549	22549					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9453002810478	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.887	1	47.887	47.387	48.387	0								0	0	0	0.66052	1	20007	20007		3.5965	1.9439	1		+		19493	13433	9406	9445	22550	22550					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9452392458916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.846	1	48.846	48.346	49.346	0								0	0	0	0.66052	1	20396	20396		3.5965	1.9439	1		+		19494	13433	9406	9445	22551	22551					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9451171755791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.257	1	49.257	48.757	49.757	0								0	0	0	0.66166	1	20564	20564		1.6526	0	1		+		19495	13433	9406	9445	22552	22552					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9453002810478	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.477	1	49.477	48.977	49.977	0								0	0	0	0.66166	1	20653	20653		1.6526	0	1		+		19496	13433	9406	9445	22553	22553					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456054568291	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.856	1	49.856	49.356	50.356	0								0	0	0	0.66052	1	20806	20806		3.5965	1.9439	1		+		19497	13433	9406	9445	22554	22554					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9463989138603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.727	1	50.727	50.227	51.227	0								0	0	0	0.66052	1	21159	21159		3.5965	1.9439	1		+		19498	13433	9406	9445	22555	22555					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456664919853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.957	1	51.957	51.457	52.457	0								0	0	0	0.66052	1	21669	21669		3.5965	1.9439	1		+		19499	13433	9406	9445	22556	22556					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9449340701103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.868	1	52.868	52.368	53.368	0								0	0	0	0.66166	1	22047	22047		1.6526	0	1		+		19500	13433	9406	9445	22557	22557					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9473754763603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.021	1	53.021	52.521	53.521	0								0	0	0	0.66166	1	22110	22110		1.6526	0	1		+		19501	13433	9406	9445	22558	22558					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9459106326103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.828	1	57.828	57.328	58.328	0								0	0	0	0.66166	1	24130	24130		1.6526	0	1		+		19502	13433	9406	9445	22559	22559					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454833865166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.016	1	58.016	57.516	58.516	0								0	0	0	0.66052	1	24206	24206		3.5965	1.9439	1		+		19503	13433	9406	9445	22560	22560					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9460937380791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.408	1	58.408	57.908	58.908	0								0	0	0	0.66166	1	24364	24364		1.6526	0	1		+		19504	13433	9406	9445	22561	22561					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.366	1	59.366	58.866	59.866	0								0	0	0	0.66166	1	24754	24754		1.6526	0	1		+		19505	13433	9406	9445	22562	22562					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9457885622978	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.052	1	61.052	60.552	61.552	0								0	0	0	0.66052	1	25457	25457		3.5965	1.9439	1		+		19506	13433	9406	9445	22563	22563					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9459716677666	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.555	1	61.555	61.055	62.055	0								0	0	0	0.66052	1	25665	25665		3.5965	1.9439	1		+		19507	13433	9406	9445	22564	22564					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456054568291	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.72	1	63.72	63.22	64.22	0								0	0	0	0.66166	1	26563	26563		1.6526	0	1		+		19508	13433	9406	9445	22565	22565					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9451782107353	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.157	1	64.157	63.657	64.657	0								0	0	0	0.66166	1	26748	26748		1.6526	0	1		+		19509	13433	9406	9445	22566	22566					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451782107353	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.77	1	21.993	21.493	22.493	0.223								0	0	0	0.6624	1	9055	9055		0.40072	0	1		+		19510	13433	9406	9445	22567	22567					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9442626833916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.956	1	22.179	21.679	22.679	0.223								0	0	0	0.66166	1	9135	9135		1.6526	0	1		+		19511	13433	9406	9445	22568	22568					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9439575076103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.149	1	23.382	22.882	23.882	0.23306								0	0	0	0.6624	1	9654	9654		0.40072	0	1		+		19512	13433	9406	9445	22569	22569					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9460327029228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.43	1	23.663	23.163	24.163	0.23306								0	0	0	0.66166	1	9771	9771		1.6526	0	1		+		19513	13433	9406	9445	22570	22570					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9465209841728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.558	1	23.791	23.291	24.291	0.23306								0	0	0	0.6624	1	9825	9825		0.40072	0	1		+		19514	13433	9406	9445	22571	22571					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9471923708916	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.866	1	24.108	23.608	24.608	0.24251								0	0	0	0.6624	1	9953	9953		0.40072	0	1		+		19515	13433	9406	9445	22572	22572					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451171755791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.088	1	24.33	23.83	24.83	0.24251								0	0	0	0.66166	1	10047	10047		1.6526	0	1		+		19516	13433	9406	9445	22573	22573					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9426147341728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.266	1	24.508	24.008	25.008	0.24251								0	0	0	0.66166	1	10123	10123		1.6526	0	1		+		19517	13433	9406	9445	22574	22574					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9460937380791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.574	1	24.816	24.316	25.316	0.24251								0	0	0	0.66166	1	10256	10256		1.6526	0	1		+		19518	13433	9406	9445	22575	22575					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9453613162041	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.749	1	24.991	24.491	25.491	0.24251								0	0	0	0.66166	1	10330	10330		1.6526	0	1		+		19519	13433	9406	9445	22576	22576					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9420043826103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.874	1	25.123	24.623	25.623	0.24921								0	0	0	0.66166	1	10383	10383		1.6526	0	1		+		19520	13433	9406	9445	22577	22577					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9446288943291	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.993	1	25.245	24.745	25.745	0.25197								0	0	0	0.66166	1	10434	10434		1.6526	0	1		+		19521	13433	9406	9445	22578	22578					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9443237185478	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.184	1	25.436	24.936	25.936	0.25197								0	0	0	0.66166	1	10514	10514		1.6526	0	1		+		19522	13433	9406	9445	22579	22579					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9438964724541	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.308	1	25.56	25.06	26.06	0.25197								0	0	0	0.66166	1	10566	10566		1.6526	0	1		+		19523	13433	9406	9445	22580	22580					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9455444216728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.457	1	25.709	25.209	26.209	0.25197								0	0	0	0.66166	1	10629	10629		1.6526	0	1		+		19524	13433	9406	9445	22581	22581					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9416381716728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.066	1	26.324	25.824	26.824	0.25823								0	0	0	0.66166	1	10890	10890		1.6526	0	1		+		19525	13433	9406	9445	22582	22582					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9427368044853	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.217	1	26.479	25.979	26.979	0.26173								0	0	0	0.66052	1	10955	10955		3.5965	1.9439	1		+		19526	13433	9406	9445	22583	22583					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9445068240166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.639	1	37.944	37.444	38.444	0.30497								0	0	0	0.66052	1	15831	15831		3.5965	1.9439	1		+		19527	13433	9406	9445	22584	22584					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9460327029228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.177	1	39.486	38.986	39.986	0.30857								0	0	0	0.66052	1	16479	16479		3.5965	1.9439	1		+		19528	13433	9406	9445	22585	22585					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9459106326103	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.979	1	40.291	39.791	40.791	0.31263								0	0	0	0.66166	1	16810	16810		1.6526	0	1		+		19529	13433	9406	9445	22586	22586					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451171755791	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.377	1	43.701	43.201	44.201	0.32389								0	0	0	0.66166	1	18213	18213		1.6526	0	1		+		19530	13433	9406	9445	22587	22587					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9455444216728	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.514	1	43.838	43.338	44.338	0.32389								0	0	0	0.66031	1	18269	18269		3.9444	0.66309	1		+		19531	13433	9406	9445	22588	22588					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9457885622978	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.436	1	45.765	45.265	46.265	0.32899								0	0	0	0.66166	1	19075	19075		1.6526	0	1		+		19532	13433	9406	9445	22589	22589					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9454833865166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.752	1	46.081	45.581	46.581	0.32899								0	0	0	0.66166	1	19205	19205		1.6526	0	1		+		19533	13433	9406	9445	22590	22590					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9454223513603	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.243	1	46.572	46.072	47.072	0.32899								0	0	0	0.66166	1	19406	19406		1.6526	0	1		+		19534	13433	9406	9445	22591	22591					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9477416872978	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.713	1	49.043	48.543	49.543	0.33034								0	0	0	0.66166	1	20421	20421		1.6526	0	1		+		19535	13433	9406	9445	22592	22592					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9460327029228	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.838	1	49.168	48.668	49.668	0.33034								0	0	0	0.66166	1	20473	20473		1.6526	0	1		+		19536	13433	9406	9445	22593	22593					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9464599490166	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.294	1	49.625	49.125	50.125	0.33019								0	0	0	0.66166	1	20661	20661		1.6526	0	1		+		19537	13433	9406	9445	22594	22594					0.22298482406768017
LLRIWLKRPK	10	Unmodified	_LLRIWLKRPK_					0	0	0			REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	REV__ENST00000491710.5_3_6:12009044-12015784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9457275271416	2	661.942799	1321.87105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.407	1	53.729	53.229	54.229	0.32283								0	0	0	0.66166	1	22371	22371		1.6526	0	1		+		19538	13433	9406	9445	22595	22595					0.22298482406768017
LLRKTSSR	8	Unmodified	_LLRKTSSR_					0	0	0			REV__chr14:104753319-104755635|97|18.61|0.79|4.55|+|0|SIVA1,None|1	REV__chr14:104753319-104755635|97|18.61|0.79|4.55|+|0|SIVA1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.8018371462822	2	480.801083	959.587613	1.1744	0.00056468	-0.24816	-0.00011931	0.92629	0.00044536	480.80089105828137	77.614	0.98528	79.366	78.946	79.932	1.7514					84	31	5	0	0	0	0.89176	1	32498	32498		0.79363	0	1	133980000	+		19539	8258	9407	9446	22596	22596					0.10620271291327299
LLRLGAWLLP	10	Unmodified	_LLRLGAWLLP_					0	0	0		ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1529724001884	3	384.581493	1150.72265	-0.033413	-1.285E-05	2.3904	0.00091931	2.357	0.00090646	384.91766164419977	31.477	0.14784	32.758	32.655	32.803	1.2813					6	4	2	0	0	0	0.12559	1	13192	13192		0.77653	0.50751	1	396720			19540	6827	9408	9447	22597	22597					0.15331751433086538
LLRLGAWLLP	10	Unmodified	_LLRLGAWLLP_					0	0	0		ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	384.5821716189384	3	384.581493	1150.72265	0.26141	0.00010053	2.005	0.0007711	2.2665	0.00087164	384.5819491499059	21.963	0.59647	23.579	23.322	23.918	1.6158					73	19	5	0	0	0	0.89646	1	9160	9160		0.77653	0.078866	1	14956000			19541	6827	9408	9447	22598	22598					0.15331751433086538
LLRLGAWLLP	10	Unmodified	_LLRLGAWLLP_					0	0	0		ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	ENST00000481697.5_1_7:102389635-102389809:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1535217165947	3	384.581493	1150.72265	0.3057	0.00011757	2.6032	0.0010012	2.9089	0.0011187	384.5823668640079	23.158	0.58698	24.809	24.498	25.085	1.6511					32	18	2	0	0	0	0.12559	1	9767	9767		0.77653	0.078866	1	418240			19542	6827	9408	9447	22599	22599					0.15331751433086538
LLRLRYRLFRL	11	Unmodified	_LLRLRYRLFRL_					0	0	0			REV__ENST00000554717.1_1_14:64108067-64108556:-|nuORF	REV__ENST00000554717.1_1_14:64108067-64108556:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2489196658134	5	304.600691	1517.96707	0.97306	0.00029639	-0.69682	-0.00021225	0.27624	8.4143E-05	304.5997073803303	40.029	0.12413	40.341	40.257	40.381	0.31263					5	3	2	0	0	0	0.14606	1	16820	16820		0	0	1	255080	+		19543	13859	9409	9448	22600	22600					0.22880630246845612
LLRMLRMI	8	Unmodified	_LLRMLRMI_					0	0	0		ENSG00000115902|ENST00000234256|SLC1A4	ENSG00000115902|ENST00000234256|SLC1A4	ENSG00000115902|ENST00000234256|SLC1A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3234741091728	2	523.322282	1044.63001	2.8514	0.0014922	0.11444	5.9889E-05	2.9658	0.0015521	523.3222465952955	93.791	0.34954	93.936	93.751	94.101	0.14493					19	10	2	0	0	0	0.89176	1	39249	39249		0.79363	0	1	892690			19544	1941	9410	9449	22601	22601					0.10948207103706409
LLRMRASI	8	Unmodified	_LLRMRASI_					0	0	0			REV__ENST00000316963.7_1_8:54975912-55013486:-|nuORF	REV__ENST00000316963.7_1_8:54975912-55013486:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2946655154228	2	480.294579	958.574605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.21	1	104.38	103.88	104.88	0.1731								0	0	0	1.0178	1	44035	44035		2.3027	0	1		+		19545	12392	9411	9450	22602	22602					0.0936611690758582
LLRNIKTA	8	Unmodified	_LLRNIKTA_					0	0	0		sp|P16760|VP22_HCMVAProteinUL24OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL24PE=3SV=3;sp|F5H9N4|VP22_HCMVMTegumentproteinUL24OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL24PE=3SV=2	sp|P16760|VP22_HCMVAProteinUL24OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL24PE=3SV=3	sp|P16760|VP22_HCMVAProteinUL24OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL24PE=3SV=3	MSMS	GG20161007_CRH_Patient100_A02_01	1	310.2017394900322	3	310.202793	927.58655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.15	1	103.15	102.65	103.65	0								0	0	0	1.0178	1	43252	43252		0.40072	0	1				19546	15971	9412	9451	22603	22603					0.1198605692242154
LLRQKGEQF	9	Unmodified	_LLRQKGEQF_					0	0	0		ENST00000431571.5_1_9:123906333-123914781:+|nuORF;ENST00000373851.6_1_9:123874787-123912836:+|nuORF;nc|ENSG00000119397|Q7Z7A1-2|CNTRL;nc|ENSG00000119397|Q7Z7A1-5|CNTRL;ENSG00000119397|ENST00000373855|CNTRL	ENST00000431571.5_1_9:123906333-123914781:+|nuORF	ENST00000431571.5_1_9:123906333-123914781:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8200561404228	2	559.819473	1117.62439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.744	1	94.021	93.521	94.521	1.277								0	0	0	0.42693	1	39031	39031		5.2307	0	1				19547	2067	9413	9452	22604	22604					0.07028523117219265
LLRQRAELEAR	11	Unmodified	_LLRQRAELEAR_					0	0	0		ENSG00000260220|ENST00000638797|CCDC187	ENSG00000260220|ENST00000638797|CCDC187	ENSG00000260220|ENST00000638797|CCDC187	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	677.3954955935478	2	677.899317	1353.78408	1.8074	0.0012252	-4.2761	-0.0028988	-2.4687	-0.0016736	677.8968501313684	84.307	0.63933	85.903	85.486	86.126	1.5962					31	20	2	0	0	0	0.14606	1	35365	35365		2.9952	1.6657	1	2810100			19548	5417	9414	9453	22605	22605					0.12134031394430167
LLRRAFLV	8	Unmodified	_LLRRAFLV_					0	0	0		KDM3A-LTBP1|1|fusion;KDM3A|p.G1000Vfs*5|1|0.07|ENSG00000115548|chr2:86484062-86484062|G/-|frameshift_variant;KDM3A|p.E1194Afs*14|1|0.36|ENSG00000115548|chr2:86490886-86490890|AGAAG/-|frameshift_variant;ENSG00000115548|ENST00000312912|KDM3A	KDM3A-LTBP1|1|fusion	KDM3A-LTBP1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3268310427666	2	494.326737	986.63892	1.9183	0.00094828	0.10368	5.1251E-05	2.022	0.00099953	494.32686268141015	78.101	1.5502	79.852	79.467	81.017	1.7514					114	49	4	0	0	0	0.87655	1	32775	32775		11.114	0	1	7365800			19549	1927	9415	9454	22606	22606					0.14506640056038123
LLRRGRLK	8	Unmodified	_LLRRGRLK_					0	0	0		PHLPP1|p.Q1514Hfs*26|1|0.18|ENSG00000081913|chr18:62978815-62978816|-/ACAT|frameshift_variant;PHLPP1|p.Q1514Vfs*31|1|0.18|ENSG00000081913|chr18:62978816-62978817|-/GTGATCAAGGATCGGCCCT|frameshift_variant;ENSG00000081913|ENST00000262719|PHLPP1	PHLPP1|p.Q1514Hfs*26|1|0.18|ENSG00000081913|chr18:62978815-62978816|-/ACAT|frameshift_variant	PHLPP1|p.Q1514Hfs*26|1|0.18|ENSG00000081913|chr18:62978815-62978816|-/ACAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.2180358767509	3	337.901449	1010.68252	1.372	0.0004636	1.0733	0.00036266	2.4452	0.00082625	337.9019179739306	69.583	0.995	70.949	70.729	71.724	1.3657					55	31	2	0	0	0	2.3239	1	29325	29325		0.45834	0	1	480850			19550	1025	9416	9455	22607	22607					0.17760249553180074
LLRRHLKK	8	Unmodified	_LLRRHLKK_					0	0	0			REV__nc|ENSG00000188566|Q9UHB4-3|NDOR1	REV__nc|ENSG00000188566|Q9UHB4-3|NDOR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	355.2458679080009	3	355.245215	1062.71382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.67	1	103.85	103.35	104.35	0.1731								0	0	0	1.0178	1	43711	43711		0.45834	0	1		+		19551	11573	9417	9456	22608	22608					0.18496822587280803
LLRRMYLK	8	Unmodified	_LLRRMYLK_					0	0	0			REV__ENSG00000166046|ENST00000299045|TCP11L2	REV__ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8431274294853	2	546.839154	1091.66375	2.3194	0.0012683	1.3918	0.00076111	3.7113	0.0020295	546.8396822390376	85.322	0.48198	86.481	86.179	86.661	1.159					64	17	5	0	0	0	0.89176	1	35728	35728		0.79363	0	1	94633000	+		19552	10809	9418	9457	22609	22609					0.12158951867104406
LLRRQPRV	8	Unmodified	_LLRRQPRV_					0	0	0			REV__ENSG00000039523|ENST00000042381|RIPOR1	REV__ENSG00000039523|ENST00000042381|RIPOR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1398193240166	2	519.338167	1036.66178	2.0605	0.0010701	0.21612	0.00011224	2.2766	0.0011823	519.3380087094807	65.242	0.24951	65.242	65.135	65.385	0					11	7	2	0	0	0	2.3239	1	27247	27247		2.8892	0	1	544620	+		19553	8592	9419	9458	22610	22610					0.144916591735182
LLRRQPRV	8	Unmodified	_LLRRQPRV_					0	0	0			REV__ENSG00000039523|ENST00000042381|RIPOR1	REV__ENSG00000039523|ENST00000042381|RIPOR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1398193240166	2	519.338167	1036.66178	2.0561	0.0010678	3.1602	0.0016412	5.2164	0.0027091	519.3397576826301	63.003	0.28165	63.332	63.13	63.412	0.32974					12	8	2	0	0	0	2.3239	1	26426	26426		2.8892	0.58649	1	490490	+		19554	8592	9419	9458	22611	22611					0.144916591735182
LLRRTKTIT	9	Unmodified	_LLRRTKTIT_					0	0	0		nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9;ENSG00000177200|ENST00000447540|CHD9	nc|ENSG00000177200|Q3L8U1-2|CHD9	nc|ENSG00000177200|Q3L8U1-2|CHD9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.6285278201103	2	551.358765	1100.70298	2.9634	0.0016339	1.4646	0.00080752	4.428	0.0024414	551.3595123241645	109.27	0.22816	109.43	109.29	109.52	0.15898					12	10	2	0	0	0	0.11946	1	47394	47394		0	0	1	3125200			19555	4440	9420	9459	22612	22612					0.15665375422327088
LLRRYTTI	8	Unmodified	_LLRRYTTI_					0	0	0			REV__nc|ENSG00000108244|Q9C075-2|KRT23	REV__nc|ENSG00000108244|Q9C075-2|KRT23	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1397582888603	2	518.319109	1034.62366	4.0569	0.0021028	-3.824	-0.0019821	0.23287	0.0001207	518.3178745657076	81.637	0.52696	83.333	83.043	83.57	1.6959					38	16	3	0	0	0	2.3239	1	34156	34156		5.7604	1.0044	1	3667200	+	+	19556	8398	9421	9460	22613	22613					0.10773728468188892
LLRTLLRL	8	Unmodified	_LLRTLLRL_					0	0	0			REV__ENSG00000125843|ENST00000615891|AP5S1	REV__ENSG00000125843|ENST00000615891|AP5S1	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3493224978447	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.087	1	92.277	91.777	92.777	0.19042								0	0	0	1.0178	1	38562	38562		0.79363	0	1		+		19557	9681	9422	9461	22614	22614					0.18231195744544948
LLRTLLRL	8	Unmodified	_LLRTLLRL_					0	0	0			REV__ENSG00000125843|ENST00000615891|AP5S1	REV__ENSG00000125843|ENST00000615891|AP5S1	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3515197634697	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.874	1	94.997	94.497	95.497	0.12331								0	0	0	1.0178	1	39702	39702		0.79363	0	1		+		19558	9681	9422	9461	22615	22615					0.18231195744544948
LLRVEPRQR	9	Unmodified	_LLRVEPRQR_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.8608276247978	2	583.859464	1165.70437	2.174	0.0012693	-0.28849	-0.00016844	1.8855	0.0011009	583.8592938104463	82.919	0.55547	83.189	83.029	83.585	0.27029					38	17	3	0	0	0	0.84963	1	34689	34689		0.6015	0	1	1959700	+		19559	9080	9423	9462	22616	22616					0.1281500951106409
LLRYFLLITN	10	Unmodified	_LLRYFLLITN_					0	0	0		ENST00000503601.1_1_4:2083186-2091962:-|nuORF	ENST00000503601.1_1_4:2083186-2091962:-|nuORF	ENST00000503601.1_1_4:2083186-2091962:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5925781130791	3	422.592058	1264.75434	0.67704	0.00028611	1.0181	0.00043022	1.6951	0.00071633	422.59229849815495	37.267	0.50903	37.267	36.985	37.494	0					53	25	3	0	0	0	0.89588	1	15612	15612		1.9064	0	1	5841400			19560	6988	9424	9463	22617	22617					0.13255699396381715
LLRYVSYYD	9	Unmodified	_LLRYVSYYD_					0	0	0		nc|ENSG00000078795|Q9NZM6-6|PKD2L2;nc|ENSG00000078795|Q9NZM6-2|PKD2L2;nc|ENSG00000078795|Q9NZM6-7|PKD2L2;nc|ENSG00000078795|Q9NZM6-5|PKD2L2;ENSG00000078795|ENST00000508883|PKD2L2	nc|ENSG00000078795|Q9NZM6-6|PKD2L2	nc|ENSG00000078795|Q9NZM6-6|PKD2L2	MSMS	GG20161007_CRH_Patient100_A02_02	2	596.3065063357353	2	596.305864	1190.59717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.172	1	55.493	54.993	55.993	0.32088								0	0	0	0.42693	1	23101	23101		4.756	0.81161	1				19561	982	9425	9464	22618	22618					0.009499947861968394
LLSCSFPAP	9	Unmodified	_LLSCSFPAP_					0	0	0			REV__ENST00000520970.5_1_8:22058712-22069238:+|nuORF	REV__ENST00000520970.5_1_8:22058712-22069238:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7388793826103	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.66839	1	20391	20391		8.5933	2.2392	1	3535400	+		19562	13629	9426	9465	22619	22619					-0.006403622402217479
LLSDVFAQL	9	Unmodified	_LLSDVFAQL_					0	0	0		ENSG00000124198|ENST00000371917|ARFGEF2	ENSG00000124198|ENST00000371917|ARFGEF2	ENSG00000124198|ENST00000371917|ARFGEF2	MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2936584353447	2	503.2844	1004.55425	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.118	1	82.352	81.852	82.852	1.2332								0	0	0	0.16797	1	34054	34054		28.487	12.64	1				19563	2215	9427	9466	22620	22620					0.0521522472874949
LLSEACWL	8	Unmodified	_LLSEACWL_					0	0	0			REV__ENSG00000188766|ENST00000691638|SPRED3	REV__ENSG00000188766|ENST00000691638|SPRED3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7394897341728	2	467.738771	933.462989	2.2259	0.0010412	-0.046803	-2.1892E-05	2.1791	0.0010193	467.73850724287405	50.288	3.6213	51.679	49.212	52.834	1.3911					248	116	3	0	0	0	0.88409	1	20164	20164		6.3541	0	1	3576900	+		19564	11585	9428	9467	22621	22621					-0.006403622402331166
LLSEELTSL	9	Unmodified	_LLSEELTSL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7794982790947	2	502.779148	1003.54374	2.3892	0.0012013	-0.5042	-0.0002535	1.885	0.00094776	502.7790037610326	63.16	0.18548	63.489	63.381	63.566	0.32974					7	5	2	0	0	0	0.3154	1	26473	26473		24.674	7.7316	1	542760			19565	1924	9429	9468	22622	22622					0.04211197283677848
LLSEELTSL	9	Unmodified	_LLSEELTSL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7789489626884	2	502.779148	1003.54374	3.0098	0.0015133	-2.1573	-0.0010846	0.85256	0.00042865	502.77764387697596	62.013	0.28613	63.431	63.27	63.556	1.4177					13	8	2	0	0	0	0.22519	1	26019	26019		30.225	1.738	1	1629100			19566	1924	9429	9468	22623	22623					0.04211197283677848
LLSEELTSL	9	Unmodified	_LLSEELTSL_					0	0	0		nc|ENSG00000115486|P38435-2|GGCX;ENSG00000115486|ENST00000233838|GGCX	nc|ENSG00000115486|P38435-2|GGCX	nc|ENSG00000115486|P38435-2|GGCX	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	502.779148	1003.54374	2.0167	0.001014	-0.66768	-0.00033569	1.349	0.00067827	502.77860819327407	63.561	0.28347	63.561	63.46	63.744	0	0.067063	0.00052718	NaN	30.225	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397310			19567	1924	9429	9468							0.04211197283677848
LLSEILHLL	9	Unmodified	_LLSEILHLL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8328124880791	2	525.831517	1049.64848	5.4419	0.0028615	-0.77425	-0.00040713	4.6676	0.0024544	525.8310500329496	89.323	0.3851	90.343	90.171	90.556	1.0199					23	11	3	0	0	0	0.10294	1	37613	37613		48.346	3.9388	1	1129700			19568	924	9430	9469	22624	22624					0.12564363550905
LLSEILHLL	9	Unmodified	_LLSEILHLL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8341552615166	2	525.831517	1049.64848	4.7398	0.0024923	-1.1664	-0.00061332	3.5734	0.001879	525.8305838116519	88.847	0.41636	90.294	90.113	90.53	1.4467					24	12	3	0	0	0	0.051699	1	37444	37444		67.344	25.249	1	926460			19569	924	9430	9469	22625	22625					0.12564363550905
LLSEILHLL	9	Unmodified	_LLSEILHLL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	525.831517	1049.64848	2.8042	0.0014746	0.40609	0.00021353	3.2103	0.0016881	525.8318593872223	90.172	0.28294	90.381	90.242	90.525	0.20904	0.041678	0.0009082	NaN	67.344	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520790			19570	924	9430	9469							0.12564363550905
LLSEIVGTIKL	11	Unmodified	_LLSEIVGTIKL_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	593.8021728396416	2	593.376289	1184.73803	3.5405	0.0021008	-1.8354	-0.0010891	1.705	0.0010117	593.3759913604099	73.129	0.15642	74.459	74.381	74.537	1.3297					7	4	2	0	0	0	0.14571	1	30710	30710		12.175	8.2304	1	385290			19571	2402	9431	9470	22626	22626					0.15304573439607339
LLSENKIR	8	Unmodified	_LLSENKIR_					0	0	0		nc|ENSG00000122376|Q86V20|SHLD2;ENSG00000122376|ENST00000298786|SHLD2	nc|ENSG00000122376|Q86V20|SHLD2	nc|ENSG00000122376|Q86V20|SHLD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7958557009697	2	486.795466	971.57638	0.060099	2.9256E-05	-0.28829	-0.00014034	-0.22819	-0.00011108	486.79561728298364	13.793	0.12373	14.519	14.442	14.565	0.72639					5	3	2	0	0	0	0.83518	1	5735	5735		18.135	0	1	669890			19572	2155	9432	9471	22627	22627					0.08945449197176458
LLSENKIR	8	Unmodified	_LLSENKIR_					0	0	0		nc|ENSG00000122376|Q86V20|SHLD2;ENSG00000122376|ENST00000298786|SHLD2	nc|ENSG00000122376|Q86V20|SHLD2	nc|ENSG00000122376|Q86V20|SHLD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	486.795466	971.57638	0.13266	6.4577E-05	0.53752	0.00026166	0.67018	0.00032624	486.7962102283951	13.642	0.12474	14.47	14.391	14.516	0.82789	-0.024497	0.0007181	NaN	18.135	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	267680			19573	2155	9432	9471							0.08945449197176458
LLSGIDEFL	9	Unmodified	_LLSGIDEFL_					0	0	0		nc|ENSG00000033867|Q9Y6M7-11|SLC4A7;nc|ENSG00000033867|Q9Y6M7-14|SLC4A7;nc|ENSG00000033867|Q9Y6M7-10|SLC4A7;nc|ENSG00000033867|Q9Y6M7-5|SLC4A7;nc|ENSG00000033867|Q9Y6M7-4|SLC4A7;nc|ENSG00000033867|Q9Y6M7-3|SLC4A7;nc|ENSG00000033867|Q9Y6M7-2|SLC4A7;nc|ENSG00000033867|Q9Y6M7-9|SLC4A7;nc|ENSG00000033867|Q9Y6M7-6|SLC4A7;nc|ENSG00000033867|Q9Y6M7-13|SLC4A7;nc|ENSG00000033867|Q9Y6M7-12|SLC4A7;nc|ENSG00000033867|Q9Y6M7|SLC4A7;nc|ENSG00000033867|Q9Y6M7-8|SLC4A7;ENSG00000033867|ENST00000454389|SLC4A7	nc|ENSG00000033867|Q9Y6M7-11|SLC4A7	nc|ENSG00000033867|Q9Y6M7-11|SLC4A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2799865603447	2	503.776408	1005.53826	1.6009	0.00080649	1.5268	0.00076915	3.1277	0.0015756	504.27988401322705	79.355	0.46377	81.09	80.784	81.247	1.735					33	14	3	0	0	0	0.54523	1	33310	33310		13.508	0	1	1347900			19574	642	9433	9472	22628	22628					0.03571518491855841
LLSHHKLAV	9	Unmodified	_LLSHHKLAV_					0	0	0			REV__ENST00000531709.6_1_11:62566050-62566089:-|nuORF	REV__ENST00000531709.6_1_11:62566050-62566089:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3141357302666	2	509.313826	1016.6131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.105	1	74.43	73.93	74.93	0.32494								0	0	0	0.42693	1	30998	30998		4.756	0	1		+		19575	13715	9434	9473	22629	22629					0.10545745813737994
LLSKEKASL	9	Unmodified	_LLSKEKASL_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.8050414919853	2	494.8055	987.596446	1.2623	0.00062459	-0.45872	-0.00022698	0.80356	0.00039761	494.8053604356615	70.662	0.42532	70.662	70.449	70.875	0					41	13	4	0	0	0	0.3154	3	29381	29381;29425;29463		24.674	5.2349	1	18102000	+		19576	12362	9435	9474	22630;22631;22632	22630					0.10215200137145075
LLSKEKASL	9	Unmodified	_LLSKEKASL_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.8067504763603	2	494.8055	987.596446	1.8887	0.00093453	-1.9002	-0.00094023	-0.011505	-5.6928E-06	494.8045892827023	70.195	0.39019	70.517	70.288	70.678	0.32224					41	12	4	0	0	0	0.3154	2	29318	29318;29367		24.674	6.5389	1	24566000	+		19577	12362	9435	9474	22633;22634	22633					0.10215200137145075
LLSKEKASL	9	Unmodified	_LLSKEKASL_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8067809939384	2	494.8055	987.596446	1.9546	0.00096714	0.643	0.00031816	2.5976	0.0012853	494.80591237000914	69.121	0.45395	70.486	70.22	70.674	1.3657					50	14	5	0	0	0	0.3154	2	28933	28933;28978		24.674	5.2349	1	54348000	+		19578	12362	9435	9474	22635;22636	22635					0.10215200137145075
LLSKEKASL	9	Unmodified	_LLSKEKASL_					0	0	0			REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	REV__ENST00000310614.11_1_11:73575441-73575483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.8068420290947	2	494.8055	987.596446	1.7452	0.00086353	0.129	6.383E-05	1.8742	0.00092736	494.80563392293044	68.601	0.40338	70.454	70.185	70.588	1.853					44	12	5	0	0	0	0.3154	2	28754	28754;28793		24.674	2.9272	1	59259000	+		19579	12362	9435	9474	22637;22638	22637					0.10215200137145075
LLSKISKIF	9	Unmodified	_LLSKISKIF_					0	0	0			REV__tr|A0A7D6VU35|A0A7D6VU35_9CLOTChemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10930PE=3SV=1	REV__tr|A0A7D6VU35|A0A7D6VU35_9CLOTChemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10930PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	349.5626098513603	3	350.230349	1047.66922	1.5996	0.00056021	-1.004	-0.00035162	0.59558	0.00020859	350.2313733725667	48.515	0.24822	50.492	50.328	50.576	1.9772					13	7	3	0	0	0	0.11716	1	20320	20320		4.897	0	1	488450	+		19580	15509	9436	9475	22639	22639					0.14728953930534772
LLSKVLIYL	9	Unmodified	_LLSKVLIYL_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3539916872978	2	531.352086	1060.68962	3.0701	0.0016313	1.1093	0.00058941	4.1794	0.0022207	531.3524454660043	70.776	0.37532	72.129	71.97	72.345	1.3536					26	11	3	0	0	0	0.043696	1	29697	29697		72.968	14.289	1	3590800			19581	1188	9437	9476	22640	22640					0.16170124590371415
LLSKVLIYL	9	Unmodified	_LLSKVLIYL_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3537475466728	2	531.352086	1060.68962	2.2294	0.0011846	0.71252	0.0003786	2.9419	0.0015632	531.3521618800276	70.245	0.43765	72.083	71.881	72.319	1.8378					30	13	3	0	0	0	0.060242	1	29449	29449		63.961	17.94	1	2968800			19582	1188	9437	9476	22641	22641					0.16170124590371415
LLSLLLFLKRM	11	Unmodified	_LLSLLLFLKRM_					0	0	0			REV__ENSG00000144229|ENST00000409968|THSD7B	REV__ENSG00000144229|ENST00000409968|THSD7B	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.6264831423759	3	449.624593	1345.85195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.376	1	95.797	95.297	96.297	0.4212								0	0	0	0.63775	1	40137	40137		0.45452	0.33165	1		+		19583	10238	9438	9477	22642	22642					0.19285765000813626
LLSLPLIDK	9	Unmodified	_LLSLPLIDK_					0	0	0			REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.8873474001884	3	337.886471	1010.63758	-0.59082	-0.00019963	3.0485	0.0010301	2.4577	0.00083042	337.8877409028813	18.839	0.24611	19.818	19.711	19.957	0.97922					14	7	2	0	0	0	0.7849	1	7845	7845		2.2828	0	1	670870	+		19584	8207	9439	9478	22643	22643					0.13268961176618177
LLSLPLIDK	9	Unmodified	_LLSLPLIDK_					0	0	0			REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	337.886471	1010.63758	-2.5378	-0.0008575	5.3372	0.0018034	2.7993	0.00094586	337.88855067984537	19.856	0.1569	19.856	19.76	19.917	0	0.062328	0.0026142	NaN	2.2828	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	282870	+		19585	8207	9439	9478							0.13268961176618177
LLSLPLIDK	9	Unmodified	_LLSLPLIDK_					0	0	0			REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	337.886471	1010.63758	0.05037	1.7019E-05	2.2286	0.00075302	2.279	0.00077004	337.8872827357221	19.606	0.30875	19.8	19.684	19.992	0.19342	0.0062345	-0.00053685	NaN	2.2828	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	794210	+		19586	8207	9439	9478							0.13268961176618177
LLSLPLIDK	9	Unmodified	_LLSLPLIDK_					0	0	0			REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	337.886471	1010.63758	-0.59082	-0.00019963	3.0485	0.0010301	2.4577	0.00083042	337.8877409028813	18.839	0.24611	19.818	19.711	19.957	0.97922	0.024403	0.00029425	NaN	2.2828	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	670870	+		19587	8207	9439	9478							0.13268961176618177
LLSLPLIDK	9	Unmodified	_LLSLPLIDK_					0	0	0			REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	REV__chr1:148433629-148435146|302|12.28|0.38|5.03|-|1|TE_info:MER66-int,MER66-int_dup67,ERV1,LTR,acceptor,-,148433383,148433629|None,LINC01138|2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	337.886471	1010.63758	-0.17109	-5.7809E-05	2.1316	0.00072025	1.9605	0.00066244	337.8871919199001	18.253	0.35592	19.701	19.552	19.908	1.448	-0.092964	-0.00063517	NaN	2.2828	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484580	+		19588	8207	9439	9478							0.13268961176618177
LLSLPSSVGV	10	Unmodified	_LLSLPSSVGV_					0	0	0			REV__ENST00000274853.7_1_6:30654418-30654859:-|nuORF	REV__ENST00000274853.7_1_6:30654418-30654859:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.2638732790947	2	486.292225	970.569897	1.7603	0.00085603	4.4369	0.0021576	6.1972	0.0030136	486.2937820883747	41.729	0.22643	43.621	43.476	43.702	1.8927					10	6	2	0	0	0	0.1245	1	17505	17505		15.847	5.0233	1	384420	+		19589	12243	9440	9479	22644	22644					0.08343511245823265
LLSNVFMSCL	10	Unmodified	_LLSNVFMSCL_					0	0	0			REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	REV__ENST00000436347.5_1_2:190313199-190340140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.7859985232353	2	563.785395	1125.55624	1.5828	0.00089233	-1.1578	-0.00065277	0.42492	0.00023956	563.7852310293723	51.881	0.37538	51.881	51.693	52.069	0					25	11	3	0	0	0	0.6796	1	21655	21655		19.362	1.2156	1	1480300	+		19590	9437	9441	9480	22645	22645					-0.001518058493047647
LLSPLLLLAV	10	Unmodified	_LLSPLLLLAV_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	525.9636718630791	2	526.359911	1050.70527	1.088	0.00057267	2.2383	0.0011781	3.3263	0.0017508	526.3611586188908	22.699	0.34957	22.699	22.401	22.75	0					18	11	2	0	0	0	0.12555	1	9375	9375		1.8442	0	1	1580100	+		19591	8656	9442	9481	22646	22646					0.18194411107424457
LLSQSLLSV	9	Unmodified	_LLSQSLLSV_					0	0	0		ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.2941467165947	2	480.292225	958.569897	2.0306	0.00097526	0.83535	0.00040121	2.8659	0.0013765	480.2928197363789	78.019	0.31487	78.019	77.811	78.126	0					17	9	3	0	0	0	0.045797	1	32486	32486		71.134	14.957	1	1043200			19592	6486	9443	9482	22647	22647					0.08895511245827947
LLSQSLLSV	9	Unmodified	_LLSQSLLSV_					0	0	0		ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2936279177666	2	480.292225	958.569897	2.6534	0.0012744	1.5223	0.00073115	4.1757	0.0020056	480.29344062163455	76.514	0.43663	77.807	77.546	77.983	1.2938					26	13	3	0	0	0	0.037761	2	32087	32087;32141		78.149	6.2271	1	3397200			19593	6486	9443	9482	22648;22649	22648					0.08895511245827947
LLSQSLLSV	9	Unmodified	_LLSQSLLSV_					0	0	0		ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	ENST00000429242.7_3_19:19567968-19576198:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	480.292225	958.569897	2.6546	0.001275	-1.6727	-0.00080338	0.98187	0.00047159	480.29154042888035	76.408	0.12696	78.175	78.095	78.222	1.7672	0.21706	-0.0015801	NaN	78.149	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	774980			19594	6486	9443	9482							0.08895511245827947
LLSRAKIL	8	Unmodified	_LLSRAKIL_					0	0	0		nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;ENSG00000254245|ENST00000253812|PCDHGA3	nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.2139160037041	3	305.211289	912.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.02	1	103.19	102.69	103.69	0.16445								0	0	0	1.0178	1	43402	43402		1.8442	0	1				19595	5390	9444	9483	22650	22650					0.1522353144483759
LLSRAKIL	8	Unmodified	_LLSRAKIL_					0	0	0		nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3;ENSG00000254245|ENST00000253812|PCDHGA3	nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	nc|ENSG00000254245|Q9Y5H0-2|PCDHGA3	MSMS	GG20161007_CRH_Patient100_W632_02	4	305.2127868533134	3	305.211289	912.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103	1	103.19	102.69	103.69	0.18066								0	0	0	1.0178	1	43347	43347		1.8442	0	1				19596	5390	9444	9483	22651	22651					0.1522353144483759
LLSRGADPLL	10	Unmodified	_LLSRGADPLL_					0	0	0		nc|ENSG00000166016|Q8N961-2|ABTB2;ENSG00000166016|ENST00000435224|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.8183471560478	2	527.816399	1053.61824	2.0221	0.0010673	0.79503	0.00041963	2.8171	0.0014869	527.8166483759405	45.614	0.28179	46.989	46.864	47.146	1.3751					14	8	2	0	0	0	0.72878	1	19099	19099		17.113	3.2068	1	1089100			19597	3877	9445	9484	22652	22652					0.09358004885712035
LLSRPQRVQAP	11	Unmodified	_LLSRPQRVQAP_					0	0	0			REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2559692263603	3	422.254328	1263.74115	4.0886	0.0017264	-1.0023	-0.00042323	3.0862	0.0013032	422.2538440758981	91.481	1.0254	92.463	92.039	93.064	0.98157					55	32	3	0	0	0	1.0362	1	38486	38486		1.3296	0	1	1190300	+		19598	13192	9446	9485	22653	22653					0.11983261336990836
LLSSKRRR	8	Unmodified	_LLSSKRRR_					0	0	0		ENST00000343674.10_1_11:46354666-46354696:+|nuORF	ENST00000343674.10_1_11:46354666-46354696:+|nuORF	ENST00000343674.10_1_11:46354666-46354696:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	508.7369567751884	2	508.327799	1014.64105	1.0585	0.00053804	-3.8911	-0.001978	-2.8326	-0.0014399	508.3267685675424	70.844	0.39124	72.682	72.503	72.894	1.8378					37	12	4	0	0	0	2.3239	1	29713	29713		23.148	0	1	6636400			19599	5951	9447	9486	22654	22654					0.1343106879385232
LLSSQRMCN	9	Unmodified	_LLSSQRMCN_					0	0	0		ENST00000419525.5_1_2:27016040-27016714:+|nuORF	ENST00000419525.5_1_2:27016040-27016714:+|nuORF	ENST00000419525.5_1_2:27016040-27016714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.1697570681572	3	351.172288	1050.49503	0.44777	0.00015724	-2.6367	-0.00092593	-2.1889	-0.00076868	351.1718072648189	58.835	0.34025	60.254	60.069	60.409	1.4196					22	10	3	0	0	0	0.66458	1	24657	24657		5.7834	0	1	1497300			19600	6437	9448	9487	22655	22655					-0.028193178287210685
LLSSVLYVV	9	Unmodified	_LLSSVLYVV_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.8057433962822	2	496.804968	991.595384	1.5222	0.00075621	0.99846	0.00049604	2.5206	0.0012523	496.8056389992853	79.774	0.49301	79.774	79.609	80.102	0					23	15	2	0	0	0	0.1735	2	33257	33257;33307		36.044	0	1	705650			19601	7040	9449	9488	22656;22657	22656					0.09924985768236638
LLSSVLYVV	9	Unmodified	_LLSSVLYVV_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.8065063357353	2	496.804968	991.595384	2.6687	0.0013258	-0.22663	-0.00011259	2.4421	0.0012132	496.80486265047057	78.528	0.68072	79.795	79.573	80.253	1.2668					50	21	3	0	0	0	0.11478	1	33017	33017		44.407	0	1	2622000			19602	7040	9449	9488	22658	22658					0.09924985768236638
LLSSVLYVV	9	Unmodified	_LLSSVLYVV_					0	0	0		ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	ENST00000512383.1_1_5:75964652-75969784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.8069946169853	2	496.804968	991.595384	1.8266	0.00090748	0.30262	0.00015034	2.1293	0.0010578	496.80524861971486	78.107	0.77721	79.859	79.559	80.336	1.7514					48	24	3	0	0	0	0.11478	1	32834	32834		44.407	0	1	2216300			19603	7040	9449	9488	22659	22659					0.09924985768236638
LLSTKLELC	9	Unmodified	_LLSTKLELC_					0	0	0			REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2956115603447	2	510.293911	1018.57327	1.9655	0.001003	2.7239	0.00139	4.6894	0.002393	510.2954540205666	42.881	0.41031	44.221	44.014	44.425	1.3399					28	12	3	0	0	0	0.12251	1	17942	17942		41.84	7.7372	1	4084100	+		19604	8639	9450	9489	22660	22660					0.06472438028140459
LLSTKLELC	9	Unmodified	_LLSTKLELC_					0	0	0			REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	REV__nc|ENSG00000056487|Q96EK2-4|PHF21B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2935974001884	2	510.293911	1018.57327	1.9893	0.0010151	1.4037	0.00071627	3.3929	0.0017314	510.29472009921005	42.259	0.34158	44.181	44.011	44.353	1.9211					26	10	3	0	0	0	0.18809	1	17682	17682		34.402	7.5181	1	4411300	+		19605	8639	9450	9489	22661	22661					0.06472438028140459
LLSTLLPLPA	10	Unmodified	_LLSTLLPLPA_					0	0	0		ENST00000428443.7_1_2:179967411-179967483:-|nuORF	ENST00000428443.7_1_2:179967411-179967483:-|nuORF	ENST00000428443.7_1_2:179967411-179967483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5599853396416	3	346.558354	1036.65323	2.1259	0.00073676	1.2662	0.00043881	3.3921	0.0011756	346.5589119647664	61.721	0.7586	63.678	63.209	63.968	1.9571					49	23	3	0	0	0	0.89588	1	25888	25888		1.9064	0	1	2301100			19606	6481	9451	9490	22662	22662					0.13637247693668542
LLSVGSILQ	9	Unmodified	_LLSVGSILQ_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2879516482353	2	465.286943	928.559333	2.5956	0.0012077	-0.47016	-0.00021876	2.1254	0.00098892	465.28681104270163	64.662	1.0186	64.989	64.689	65.707	0.32689					88	31	5	0	0	0	0.079895	1	27178	27178		56.177	0.6743	1	86604000			19607	3605	9452	9491	22663	22663					0.09219528591370363
LLSVGSILQ	9	Unmodified	_LLSVGSILQ_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	929.5710327029228	1	929.566609	928.559333	2.5657	0.002385	0.012968	1.2055E-05	2.5786	0.002397	929.5662511501671	63.508	0.30248	64.922	64.753	65.055	1.4134					16	9	2	0	0	0	0.059546	1	26634	26634		64.236	2.8788	1	1685700			19608	3605	9452	9491	22664	22664					0.09219528591370363
LLSVGSILQ	9	Unmodified	_LLSVGSILQ_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	929.566609	928.559333	1.9625	0.0018243	0.13254	0.00012321	2.0951	0.0019475	929.5666554063387	64.642	0.21532	64.969	64.884	65.099	0.32689	0.052153	0.00027173	NaN	64.236	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	616930			19609	3605	9452	9491							0.09219528591370363
LLSVGSILQ	9	Unmodified	_LLSVGSILQ_					0	0	0		nc|ENSG00000162073|Q8N4S7-3|PAQR4;nc|ENSG00000162073|Q8N4S7-2|PAQR4;ENSG00000162073|ENST00000318782|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	nc|ENSG00000162073|Q8N4S7-3|PAQR4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	929.566609	928.559333	2.4762	0.0023018	-1.0687	-0.00099347	1.4075	0.0013083	929.5643808234967	62.915	0.27493	64.86	64.752	65.027	1.9444	-0.057148	-0.00084494	NaN	64.236	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1352000			19610	3605	9452	9491							0.09219528591370363
LLSVPGYKEK	10	Unmodified	_LLSVPGYKEK_					0	0	0		nc|ENSG00000204394|P26640-2|VARS1;VARS|p.V773Dfs*4|1|0.04|ENSG00000204394|chr6:31781876-31781877|-/T|frameshift_variant;ENSG00000204394|ENST00000375663|VARS1	nc|ENSG00000204394|P26640-2|VARS1	nc|ENSG00000204394|P26640-2|VARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3301879763603	2	567.331882	1132.64921	1.4037	0.00079635	-2.6697	-0.0015146	-1.266	-0.00071825	567.3302083958685	72.689	1.6753	72.689	71.636	73.312	0					116	52	3	0	0	0	0.89803	1	30286	30286		1.6526	0	1	2431800			19611	5140	9453	9492	22665	22665					0.0881915819995811
LLSWHRNV	8	Unmodified	_LLSWHRNV_					0	0	0		ENST00000433358.5_1_16:450186-450339:+|nuORF	ENST00000433358.5_1_16:450186-450339:+|nuORF	ENST00000433358.5_1_16:450186-450339:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7885009646416	2	512.787976	1023.5614	2.2055	0.001131	-2.0314	-0.0010417	0.17409	8.9271E-05	512.7882184123029	52.015	0.27606	52.015	51.854	52.13	0					17	8	3	0	0	0	0.88409	1	21721	21721		6.3541	0	1	841000			19612	6511	9454	9493	22666	22666					0.05056002119840741
LLTASPCPPA	10	Unmodified	_LLTASPCPPA_					0	0	0		ENST00000495983.1_1_9:130670673-130672537:-|nuORF	ENST00000495983.1_1_9:130670673-130672537:-|nuORF	ENST00000495983.1_1_9:130670673-130672537:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2579833865166	2	485.257328	968.500103	1.8561	0.00090067	0.83439	0.00040489	2.6905	0.0013056	485.25761715407845	43.094	1.1832	43.094	42.819	44.002	0					67	37	2	0	0	0	0.846	1	17973	17973		7.2892	0.93513	1	1234000			19613	6949	9455	9494	22667	22667					0.014593093055395912
LLTCQPPHP	9	Unmodified	_LLTCQPPHP_					0	0	0			REV__EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	REV__EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.2688476443291	2	503.262945	1004.51134	1.8266	0.00091925	2.1281	0.001071	3.9547	0.0019903	503.2638779665791	94.41	0.33534	94.41	94.18	94.516	0					18	10	2	0	0	0	0.76456	1	39478	39478		4.756	1.8668	1	763450	+		19614	8473	9456	9495	22668	22668					0.009261313996830722
LLTCSIICYLT	11	Unmodified	_LLTCSIICYLT_					0	0	0		nc|ENSG00000231852|P08686-2|CYP21A2;ENSG00000231852|ENST00000644719|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	621.8326293826103	2	621.82726	1241.63997	2.7036	0.0016812	3.9607	0.0024629	6.6644	0.0041441	621.830069773936	84.291	0.2487	84.291	84.213	84.461	0					12	7	2	0	0	0	0.90709	1	35138	35138		9.3831	0	1	433730			19615	5306	9457	9496	22669	22669					0.02881305527762379
LLTCSIICYLT	11	Unmodified	_LLTCSIICYLT_					0	0	0		nc|ENSG00000231852|P08686-2|CYP21A2;ENSG00000231852|ENST00000644719|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	nc|ENSG00000231852|P08686-2|CYP21A2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	621.82726	1241.63997	2.5936	0.0016128	5.0464	0.003138	7.64	0.0047507	621.8298291204205	82.444	0.30809	84.114	83.986	84.294	1.67	-0.087031	0.00040236	NaN	9.3831	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	713460			19616	5306	9457	9496							0.02881305527762379
LLTGDLDFL	9	Unmodified	_LLTGDLDFL_					0	0	0			REV__tr|A0A553SF37|A0A553SF37_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_08160PE=4SV=1	REV__tr|A0A553SF37|A0A553SF37_NIACIHADfamilyhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_08160PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7770263552666	2	503.776408	1005.53826	2.8721	0.0014469	0.79771	0.00040187	3.6698	0.0018487	503.7757906543439	79.811	0.58788	81.063	80.769	81.357	1.2512					40	18	3	0	0	0	0.54523	1	33496	33496		13.508	0	1	2297100	+		19617	14685	9458	9497	22670	22670					0.03571518491855841
LLTGFGHW	8	Unmodified	_LLTGFGHW_					0	0	0		ENST00000367506.9_1_1:185125904-185126051:-|nuORF	ENST00000367506.9_1_1:185125904-185126051:-|nuORF	ENST00000367506.9_1_1:185125904-185126051:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.4835082888603	1	930.483214	929.475937	2.6328	0.0024497	-1.626	-0.0015129	1.0068	0.00093679	930.4817895002279	87.019	0.89062	87.263	86.606	87.496	0.24387					98	35	3	0	0	0	0.89176	1	36444	36444		0.79363	0	1	52791000			19618	6064	9459	9498	22671	22671					0.008378369341812686
LLTKKGEKV	9	Unmodified	_LLTKKGEKV_					0	0	0		tr|A0A553SL12|A0A553SL12_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_19775PE=3SV=1	tr|A0A553SL12|A0A553SL12_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_19775PE=3SV=1	tr|A0A553SL12|A0A553SL12_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_19775PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	508.7935974001884	2	508.329142	1014.64373	2.2607	0.0011492	-3.4967	-0.0017775	-1.236	-0.00062829	508.3287747692074	72.637	0.41046	72.962	72.737	73.147	0.32494					26	12	3	0	0	0	0.08828	1	30364	30364		28.487	3.813	1	2041700			19619	16318	9460	9499	22672	22672					0.13699479408148818
LLTLKALIY	9	Unmodified	_LLTLKALIY_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|271|2|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|271|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.7711669802666	2	524.344261	1046.67397	2.8305	0.0014841	-1.5207	-0.00079739	1.3097	0.00068675	524.3430034753544	69.739	0.25128	71.577	71.436	71.687	1.8378					10	7	2	0	0	0	0.11568	1	29229	29229		6.7232	4.1457	1	652640	+		19620	14258	9461	9500	22673	22673					0.15249838073327737
LLTNYYDR	8	Unmodified	_LLTNYYDR_					0	0	0			REV__nc|ENSG00000000457|Q8IZE3|SCYL3	REV__nc|ENSG00000000457|Q8IZE3|SCYL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2701904177666	2	529.269281	1056.52401	2.1889	0.0011585	-0.67401	-0.00035673	1.5148	0.00080176	529.2687613629959	81.377	0.32863	81.668	81.493	81.822	0.29056					17	10	2	0	0	0	0.88055	1	34042	34042		8.5933	0	1	1680200	+		19621	14375	9462	9501	22674	22674					-0.001991339364394662
LLTNYYDR	8	Unmodified	_LLTNYYDR_					0	0	0			REV__nc|ENSG00000000457|Q8IZE3|SCYL3	REV__nc|ENSG00000000457|Q8IZE3|SCYL3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	529.269281	1056.52401	2.1889	0.0011585	-0.67401	-0.00035673	1.5148	0.00080176	529.2687613629959	81.377	0.32863	81.668	81.493	81.822	0.29056	0.072375	-0.00026572	NaN	8.5933	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1680200	+		19622	14375	9462	9501							-0.001991339364394662
LLTPPNLA	8	Unmodified	_LLTPPNLA_					0	0	0			REV__ENSG00000286681.1,AF235103.3,chr8,-,I1.1,144857625,144868058|70|11.61|1|intron	REV__ENSG00000286681.1,AF235103.3,chr8,-,I1.1,144857625,144868058|70|11.61|1|intron	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3159667849541	2	419.755278	837.496004	1.6651	0.00069892	1.055	0.00044283	2.72	0.0011417	419.7552584772714	49.246	0.37421	50.637	50.421	50.796	1.3911					21	11	2	0	0	0	2.3239	1	20541	20541		2.8892	0	1	1169100	+		19623	12035	9463	9502	22675	22675					0.07075587874135181
LLTPPNLA	8	Unmodified	_LLTPPNLA_					0	0	0			REV__ENSG00000286681.1,AF235103.3,chr8,-,I1.1,144857625,144868058|70|11.61|1|intron	REV__ENSG00000286681.1,AF235103.3,chr8,-,I1.1,144857625,144868058|70|11.61|1|intron	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	419.755278	837.496004	1.936	0.00081265	0.0818	3.4336E-05	2.0178	0.00084698	419.75496676798787	48.719	0.36966	50.696	50.453	50.823	1.9772	0.029515	-0.00034994	NaN	2.8892	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	999590	+		19624	12035	9463	9502							0.07075587874135181
LLTPPPLLL	9	Unmodified	_LLTPPPLLL_					0	0	0			REV__ENSG00000050344|ENST00000056233|NFE2L3	REV__ENSG00000050344|ENST00000056233|NFE2L3	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.8250610232353	2	488.825704	975.636855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.144	1	98.401	97.901	98.901	0.25636								0	0	0	0.35192	1	41295	41295		13.508	4.1604	1		+		19625	8620	9464	9503	22676	22676					0.14806166527569076
LLTPRRRQR	9	Unmodified	_LLTPRRRQR_					0	0	0		ENSG00000249961|ENST00000433154|TERB1	ENSG00000249961|ENST00000433154|TERB1	ENSG00000249961|ENST00000433154|TERB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2541992068291	3	399.254662	1194.74216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.546	1	27.818	27.318	28.318	1.2715								0	0	0	0.42693	1	11116	11116		2.7352	0.23671	1				19626	5378	9465	9504	22677	22677					0.15257520496538746
LLTPRRTR	8	Unmodified	_LLTPRRTR_					0	0	0		ENSG00000169006|ENST00000306928|NTSR2	ENSG00000169006|ENST00000306928|NTSR2	ENSG00000169006|ENST00000306928|NTSR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.8251830935478	2	506.82235	1011.63015	2.0704	0.0010493	3.1967	0.0016202	5.2671	0.0026695	506.82389184700514	45.866	0.25292	46.195	46.08	46.333	0.32899					17	7	3	0	0	0	0.8735	1	19299	19299		16.942	0	1	1075200			19627	4063	9466	9505	22678	22678					0.12479666419562818
LLTPSWLYI	9	Unmodified	_LLTPSWLYI_					0	0	0			REV__ENST00000472090.6_1_10:42947077-42949616:-|nuORF	REV__ENST00000472090.6_1_10:42947077-42949616:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3170043826103	2	553.318243	1104.62193	2.4392	0.0013497	-3.2099	-0.0017761	-0.77066	-0.00042642	553.3167142797598	49.984	0.57012	51.375	51.197	51.767	1.3911					31	17	3	0	0	0	0.12174	1	20976	20976		42.095	1.8554	1	3302200	+		19628	13293	9467	9506	22679	22679					0.07380674659543729
LLTPSWLYI	9	Unmodified	_LLTPSWLYI_					0	0	0			REV__ENST00000472090.6_1_10:42947077-42949616:-|nuORF	REV__ENST00000472090.6_1_10:42947077-42949616:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3193237185478	2	553.318243	1104.62193	1.632	0.00090301	-1.1876	-0.0006571	0.44443	0.00024591	553.3176012587256	49.466	0.47311	51.444	51.192	51.665	1.9772					30	14	3	0	0	0	0.12174	1	20679	20679		42.095	5.5884	1	2487400	+		19629	13293	9467	9506	22680	22680					0.07380674659543729
LLTPTAKP	8	Unmodified	_LLTPTAKP_					0	0	0			REV__nc|ENSG00000248905|Q68DA7-5|FMN1	REV__nc|ENSG00000248905|Q68DA7-5|FMN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.2663146853447	2	420.763104	839.511654	0.47109	0.00019822	1.1323	0.00047645	1.6034	0.00067467	420.7642993114805	18	0.27208	18.979	18.845	19.117	0.97922					17	8	3	0	0	0	0.89008	1	7504	7504		2.5775	0	1	1031200	+		19630	14550	9468	9507	22681	22681					0.08547874391183541
LLTPTAKP	8	Unmodified	_LLTPTAKP_					0	0	0			REV__nc|ENSG00000248905|Q68DA7-5|FMN1	REV__nc|ENSG00000248905|Q68DA7-5|FMN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	420.763104	839.511654	-0.16506	-6.9449E-05	4.4048	0.0018534	4.2398	0.0017839	420.7650919168987	18.938	0.21023	18.938	18.835	19.045	0	0.04078	0.0008113	NaN	2.5775	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1248300	+		19631	14550	9468	9507							0.08547874391183541
LLTPTAKP	8	Unmodified	_LLTPTAKP_					0	0	0			REV__nc|ENSG00000248905|Q68DA7-5|FMN1	REV__nc|ENSG00000248905|Q68DA7-5|FMN1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	420.763104	839.511654	0.79005	0.00033242	3.3323	0.0014021	4.1224	0.0017345	420.76445580772224	18.602	0.4775	18.775	18.55	19.028	0.17286	-0.12245	-9.1233E-05	NaN	2.5775	21	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308300	+		19632	14550	9468	9507							0.08547874391183541
LLTPTAKP	8	Unmodified	_LLTPTAKP_					0	0	0			REV__nc|ENSG00000248905|Q68DA7-5|FMN1	REV__nc|ENSG00000248905|Q68DA7-5|FMN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	420.763104	839.511654	0.47109	0.00019822	1.1323	0.00047645	1.6034	0.00067467	420.7642993114805	18	0.27208	18.979	18.845	19.117	0.97922	0.081665	-0.0019426	NaN	2.5775	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1031200	+		19633	14550	9468	9507							0.08547874391183541
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3138915896416	2	493.313295	984.612037	1.9831	0.00097828	0.63664	0.00031406	2.6197	0.0012923	493.31335909958705	69.232	0.37708	70.597	70.381	70.758	1.3657					25	12	3	0	0	0	0.64261	1	29092	29092		36.044	9.7029	1	6479200	+		19634	8482	9469	9508	22682	22682					0.11911531444854973
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3150512576103	2	493.313295	984.612037	3.0547	0.0015069	0.18037	8.8981E-05	3.2351	0.0015959	493.31332406647033	70.6	0.44743	71.953	71.744	72.191	1.3536					40	13	4	0	0	0	0.64261	1	29643	29643		36.044	3.9272	1	9424900	+		19635	8482	9469	9508	22683	22683					0.11911531444854973
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3147765994072	2	493.313295	984.612037	1.7246	0.00085075	0.65757	0.00032439	2.3821	0.0011751	493.313445214217	68.632	0.33433	70.485	70.313	70.648	1.853					25	10	3	0	0	0	0.64261	1	28825	28825		36.044	7.5574	1	5080000	+		19636	8482	9469	9508	22684	22684					0.11911531444854973
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3146850466728	2	493.313295	984.612037	2.4531	0.0012101	-0.1515	-7.4739E-05	2.3016	0.0011354	493.3132086067642	70.06	0.48029	71.898	71.687	72.167	1.8378					35	14	3	0	0	0	0.71791	1	29446	29446		28.487	3.813	1	6061000	+		19637	8482	9469	9508	22685	22685					0.11911531444854973
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.313295	984.612037	1.9831	0.00097828	0.63664	0.00031406	2.6197	0.0012923	493.31335909958705	69.232	0.37708	70.597	70.381	70.758	1.3657	0.056277	-1.0465E-05	NaN	36.044	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6479200	+		19638	8482	9469	9508							0.11911531444854973
LLTRLLAW	8	Unmodified	_LLTRLLAW_					0	0	0			REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	REV__ENST00000481305.1_1_7:150500415-150501953:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	493.313295	984.612037	1.7246	0.00085075	0.65757	0.00032439	2.3821	0.0011751	493.313445214217	68.632	0.33433	70.485	70.313	70.648	1.853	-0.056277	1.0184E-05	NaN	36.044	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5080000	+		19639	8482	9469	9508							0.11911531444854973
LLTRNRNI	8	Unmodified	_LLTRNRNI_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3078185915947	2	500.306532	998.598512	1.7194	0.00086023	0.55679	0.00027856	2.2762	0.0011388	500.30632089934187	76.408	0.46503	76.408	76.254	76.719	0					25	14	3	0	0	0	0.87803	1	31850	31850		10.183	0	1	1926500	+		19640	10703	9470	9509	22686	22686					0.09915673665602753
LLTSAFWIW	9	Unmodified	_LLTSAFWIW_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|163|2|anti-sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|163|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.5992309451103	2	568.810585	1135.60662	2.2416	0.0012751	-4.0988	-0.0023314	-1.8571	-0.0010564	568.8080262310534	44.008	0.18496	45.362	45.254	45.439	1.3536					7	5	2	0	0	0	0.10591	1	18417	18417		18.135	9.5417	1	411370	+		19641	14299	9471	9510	22687	22687					0.04423807862372087
LLTSDLLSL	9	Unmodified	_LLTSDLLSL_					0	0	0		nc|ENSG00000163482|Q9NRP7-2|STK36;ENSG00000163482|ENST00000295709|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5776244997978	1	974.576839	973.569563	2.5846	0.0025189	-1.5752	-0.0015352	1.0093	0.00098369	974.5756426049686	79.965	0.4027	81.216	81.048	81.45	1.2512					19	12	2	0	0	0	0.069258	1	33602	33602		60.39	2.9182	1	1669600			19642	3687	9472	9511	22688	22688					0.08172091525955238
LLTSDLLSL	9	Unmodified	_LLTSDLLSL_					0	0	0		nc|ENSG00000163482|Q9NRP7-2|STK36;ENSG00000163482|ENST00000295709|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	nc|ENSG00000163482|Q9NRP7-2|STK36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5747558474541	1	974.576839	973.569563	1.4251	0.0013889	-1.8597	-0.0018125	-0.43463	-0.00042358	974.5785890922764	79.508	0.3673	81.225	81.046	81.413	1.7167					17	11	2	0	0	0	0.03795	1	33346	33346		77.984	10.64	1	1402100			19643	3687	9472	9511	22689	22689					0.08172091525955238
LLTSVLDLTYK	11	Unmodified	_LLTSVLDLTYK_					0	0	0			REV__chr8:73959133-73959765|119|10.62|0.3|5.14|-|2|TE_info:Tigger3b,Tigger3b_dup3279,TcMar-Tigger,DNA,acceptor,-,73958804,73959133|None,ELOC|3	REV__chr8:73959133-73959765|119|10.62|0.3|5.14|-|2|TE_info:Tigger3b,Tigger3b_dup3279,TcMar-Tigger,DNA,acceptor,-,73958804,73959133|None,ELOC|3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3704101443291	2	633.371204	1264.72785	1.0752	0.000681	-2.8168	-0.0017841	-1.7416	-0.0011031	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	1.0174	1	33597	33597		2.7352	0.23671	1	5927400	+		19644	8348	9473	9512	22690	22690					0.10607965714393686
LLTTRPLV	8	Unmodified	_LLTTRPLV_					0	0	0			REV__ENST00000568555.1_1_15:34819771-34820455:-|nuORF	REV__ENST00000568555.1_1_15:34819771-34820455:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7984496951103	2	456.797478	911.580402	2.2576	0.0010313	0.39795	0.00018178	2.6555	0.001213	456.79758891263936	68.001	0.45789	69.378	69.065	69.523	1.3778					25	14	3	0	0	0	0.88163	1	28519	28519		11.114	0	1	1772000	+		19645	12501	9474	9513	22691	22691					0.1210753869089558
LLTTRPLV	8	Unmodified	_LLTTRPLV_					0	0	0			REV__ENST00000568555.1_1_15:34819771-34820455:-|nuORF	REV__ENST00000568555.1_1_15:34819771-34820455:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	456.797478	911.580402	1.6536	0.00075538	0.70951	0.0003241	2.3632	0.0010795	456.79799596151867	67.412	0.39877	69.282	69.059	69.458	1.87	-0.048169	0.00015751	NaN	11.114	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	738090	+		19646	12501	9474	9513							0.1210753869089558
LLTVETCSI	9	Unmodified	_LLTVETCSI_					0	0	0		ENST00000469676.1_1_2:74362651-74373491:-|nuORF	ENST00000469676.1_1_2:74362651-74373491:-|nuORF	ENST00000469676.1_1_2:74362651-74373491:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.7633239626884	2	489.762443	977.510333	0.76646	0.00037538	1.5331	0.00075084	2.2995	0.0011262	489.76318987092225	21.853	0.27726	21.853	21.688	21.966	0					20	8	3	0	0	0	0.12174	1	9107	9107		42.095	6.0504	1	2226700			19647	6729	9475	9514	22692	22692					0.020678722401157756
LLTVETFSV	9	Unmodified	_LLTVETFSV_					0	0	0		ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	ENSG00000066739|ENST00000359933|ATG2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.8604003787041	3	336.858581	1007.55391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.555	1	79.822	79.322	80.322	1.2668								0	0	0	0.26021	1	32976	32976		15.248	0	1				19648	811	9476	9515	22693	22693					0.050438050089155695
LLTVGALL	8	Unmodified	_LLTVGALL_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A;ENST00000534472.5_1_11:125465789-125479519:+|nuORF;ENST00000531001.1_1_11:125478078-125479612:+|nuORF;ENST00000525431.1_1_11:125476222-125478225:+|nuORF	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MSMS	GG20161007_CRH_Patient100_A02_02	2	400.2702514529228	2	400.268022	798.521491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.943	1	99.023	98.523	99.523	0.080376								0	0	0	1.0178	1	41423	41423		2.8892	0	1				19649	2642	9477	9516	22694	22694					0.11417062396583333
LLTVQLKQPR	10	Unmodified	_LLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2557250857353	3	399.255557	1194.74484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.953	1	27.67	27.17	28.17	1.7167								0	0	0	0.66068	1	10852	10852		3.3196	0.24738	1				19650	2540	9478	9517	22695	22695					0.15525931110846614
LLTWSPSM	8	Unmodified	_LLTWSPSM_					0	0	0			REV__nc|ENSG00000128513|Q9NUX5-2|POT1	REV__nc|ENSG00000128513|Q9NUX5-2|POT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7375060915947	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.88409	1	21097	21097		6.3541	0	1	3535400	+		19651	9728	9479	9518	22696	22696					-0.006403622402103792
LLTYYQRVFER	11	Unmodified	_LLTYYQRVFER_					0	0	0			REV__ENST00000518726.5_1_5:151166169-151166277:+|nuORF	REV__ENST00000518726.5_1_5:151166169-151166277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.6050292849541	3	496.605026	1486.79325	1.51	0.00074986	-0.41194	-0.00020457	1.098	0.00054528	496.604980530399	42.84	0.91724	42.84	42.447	43.365	0					66	29	4	0	0	0	1.0362	1	18068	18068		1.3296	0.11481	1	1283000	+		19652	8329	9480	9519	22697	22697					0.06932379960039725
LLVAEPPS	8	Unmodified	_LLVAEPPS_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-3|WDR90	REV__nc|ENSG00000161996|Q96KV7-3|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2386657595634	2	413.239461	824.46437	1.9248	0.00079539	-2.5913	-0.0010708	-0.66656	-0.00027545	413.23834179239384	71.698	0.47563	72.022	71.751	72.227	0.32359					40	14	4	0	0	0	0.89008	1	30074	30074		2.5775	0	1	14935000	+		19653	10631	9481	9520	22698	22698					0.045115951201864846
LLVAHPEES	9	Unmodified	_LLVAHPEES_					0	0	0		ENST00000598364.1_1_19:46318820-46320367:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF	ENST00000598364.1_1_19:46318820-46320367:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	497.7631408572197	2	497.763832	993.513111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.542	1	51.542	51.042	52.042	0								0	0	0	0.36184	1	21497	21497		12.532	0	1				19654	7531	9482	9521	22699	22699					0.01609463689283075
LLVAPRGRR	9	Unmodified	_LLVAPRGRR_					0	0	0		ENST00000316554.4_1_12:48577511-48577595:+|nuORF	ENST00000316554.4_1_12:48577511-48577595:+|nuORF	ENST00000316554.4_1_12:48577511-48577595:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	346.5597411990166	3	346.561203	1036.66178	-1.1449	-0.00039678	-3.4918	-0.0012101	-4.6367	-0.0016069	346.5601449629788	64.55	0.57854	64.55	64.206	64.784	0					43	17	3	0	0	0	0.8462	1	26897	26897		1.0715	0	1	3564400			19655	5832	9483	9522	22700	22700					0.144916591735182
LLVDDSFLHTV	11	Unmodified	_LLVDDSFLHTV_					0	0	0		ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	629.8386718630791	2	629.837528	1257.6605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.96	1	67.96	67.46	68.46	0								0	0	0	0.46473	1	28304	28304		27.629	12.791	1				19656	4346	9484	9523	22701	22701					0.041979355034072796
LLVDDSFLHTV	11	Unmodified	_LLVDDSFLHTV_					0	0	0		ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	629.8393432497978	2	629.837528	1257.6605	1.6414	0.0010338	1.8083	0.0011389	3.4497	0.0021728	629.8394639334626	67.467	0.21794	67.789	67.651	67.869	0.32269					10	6	2	0	0	0	0.1562	1	28242	28242		45.7	27.553	1	547000			19657	4346	9484	9523	22702	22702					0.041979355034072796
LLVDDSFLHTV	11	Unmodified	_LLVDDSFLHTV_					0	0	0		ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	629.837528	1257.6605	1.7338	0.001092	2.2432	0.0014128	3.977	0.0025049	629.8388025479655	66.253	0.24557	67.642	67.536	67.782	1.3888	-0.085251	0.00076582	NaN	45.7	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	974090			19658	4346	9484	9523							0.041979355034072796
LLVDDSFLHTV	11	Unmodified	_LLVDDSFLHTV_					0	0	0		ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	ENSG00000174939|ENST00000308748|ASPHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	629.837528	1257.6605	1.2537	0.00078962	0.91421	0.0005758	2.1679	0.0013654	629.8389707860551	65.841	0.21175	67.75	67.616	67.828	1.9085	0.022672	-0.00090825	NaN	45.7	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	828260			19659	4346	9484	9523							0.041979355034072796
LLVEAAPAR	9	Unmodified	_LLVEAAPAR_					0	0	0			REV__ENST00000397086.6_2_16:2303747-2303867:-|nuORF	REV__ENST00000397086.6_2_16:2303747-2303867:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.2862731814384	2	470.284734	938.554916	3.4421	0.0016188	-0.53433	-0.00025129	2.9078	0.0013675	470.28436025715513	96.515	0.18169	96.62	96.573	96.755	0.105					7	5	2	0	0	0	0.83753	1	40392	40392		1.8442	0	1	5483400	+		19660	12862	9485	9524	22703	22703					0.08318064168463479
LLVEFPLRPVP	11	Unmodified	_LLVEFPLRPVP_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2650939822197	3	427.263941	1278.76999	2.1191	0.00090541	1.5292	0.00065335	3.6483	0.0015588	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	0.9945	1	17704	17704		4.1166	1.6818	1	48247000	+		19661	10232	9486	9525	22704	22704					0.14175985913402656
LLVEFPLRPVP	11	Unmodified	_LLVEFPLRPVP_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7007324099541	4	320.699775	1278.76999	1.0696	0.00034303	1.764	0.00056572	2.8336	0.00090875	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	1.0254	1	17037	17037		2.2527	0	1	367210000	+		19662	10232	9486	9525	22705	22705					0.14175985913402656
LLVEFPLRPVP	11	Unmodified	_LLVEFPLRPVP_					0	0	0			REV__ENSG00000144031|ENST00000360589|ANKRD53	REV__ENSG00000144031|ENST00000360589|ANKRD53	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	427.263941	1278.76999	2.1191	0.00090541	1.5292	0.00065335	3.6483	0.0015588	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058	-0.076154	-0.0004663	NaN	4.1166	155	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48247000	+		19663	10232	9486	9525							0.14175985913402656
LLVEVDFNT	9	Unmodified	_LLVEVDFNT_					0	0	0			REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.5233947634697	3	350.521969	1048.54408	0.63327	0.00022198	3.5496	0.0012442	4.1828	0.0014662	350.5231198120406	71.487	0.30898	72.828	72.689	72.998	1.3415					14	9	2	0	0	0	0.50272	1	30015	30015		10.899	0	1	1848400	+		19664	9892	9487	9526	22706	22706					0.02174617003538515
LLVEVDFNT	9	Unmodified	_LLVEVDFNT_					0	0	0			REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	350.521969	1048.54408	0.63327	0.00022198	3.5496	0.0012442	4.1828	0.0014662	350.5231198120406	71.487	0.30898	72.828	72.689	72.998	1.3415	-0.018717	-0.00037098	NaN	10.899	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1848400	+		19665	9892	9487	9526							0.02174617003538515
LLVEVDFNT	9	Unmodified	_LLVEVDFNT_					0	0	0			REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	REV__THUMPD3|p.I274F|1|0.73|ENSG00000134077|chr3:9374528-9374528|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	350.521969	1048.54408	0.71678	0.00025125	4.2212	0.0014796	4.938	0.0017309	350.5231915203191	71.042	0.33718	72.866	72.697	73.034	1.824	0.018717	0.00033527	NaN	10.899	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	858940	+		19666	9892	9487	9526							0.02174617003538515
LLVFLAGFPV	10	Unmodified	_LLVFLAGFPV_					0	0	0		nc|ENSG00000089356|Q14802-5|FXYD3;ENSG00000089356|ENST00000604404|FXYD3;nc|ENSG00000089356|Q14802-4|FXYD3;nc|ENSG00000089356|Q14802-2|FXYD3;nc|ENSG00000089356|Q14802-3|FXYD3	nc|ENSG00000089356|Q14802-5|FXYD3	nc|ENSG00000089356|Q14802-5|FXYD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3307983279228	2	538.331153	1074.64775	2.8885	0.001555	-2.3004	-0.0012384	0.58814	0.00031662	538.3289997483695	76.252	0.37688	78.02	77.813	78.19	1.7672					25	11	3	0	0	0	0.56346	1	32039	32039		24.674	1.5255	1	2165700			19667	1125	9488	9527	22707	22707					0.11341568901866594
LLVFLVKKK	9	Unmodified	_LLVFLVKKK_					0	0	0		ENST00000379561.5_1_13:41132958-41133663:-|nuORF	ENST00000379561.5_1_13:41132958-41133663:-|nuORF	ENST00000379561.5_1_13:41132958-41133663:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1087.778613269329	1	1087.76016	1086.75289	2.2024	0.0023957	2.7861	0.0030306	4.9886	0.0054264	1088.7650932218721	34.905	0.10973	35.205	35.108	35.218	0.29942					10	6	2	0	0	0	0.11957	1	14622	14622		0	0	1	5116600			19668	6213	9489	9528	22708	22708					0.21298110098268808
LLVGFVHYL	9	Unmodified	_LLVGFVHYL_					0	0	0		ENST00000488390.1_1_3:113303591-113320529:+|nuORF;SIDT1|p.R434Tfs*37|1|0.82|ENSG00000072858|chr3:113603995-113603996|-/ACAGACAGCTCCGTGGAGGAGAGCGACTTCGA|frameshift_variant;ENSG00000072858|ENST00000264852|SIDT1;nc|ENSG00000072858|Q9NXL6-2|SIDT1	ENST00000488390.1_1_3:113303591-113320529:+|nuORF	ENST00000488390.1_1_3:113303591-113320529:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8186523318291	2	530.813128	1059.6117	2.0445	0.0010852	2.3964	0.001272	4.4408	0.0023573	530.8142953149015	69.16	2.2442	70.526	69.352	71.596	1.3657					144	72	4	0	0	0	0.75267	1	28838	28838		5.2307	2.3415	1	15337000			19669	892	9490	9529	22709	22709					0.0842811172499296
LLVIWTHL	8	Unmodified	_LLVIWTHL_					0	0	0		ENST00000257013.8_1_X:134166802-134167357:+|nuORF;nc|ENSG00000134590|O15255|RTL8C	ENST00000257013.8_1_X:134166802-134167357:+|nuORF	ENST00000257013.8_1_X:134166802-134167357:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8113281130791	2	497.807845	993.601138	2.4702	0.0012297	2.2088	0.0010995	4.679	0.0023292	497.80936660112326	71.956	0.27348	73.78	73.601	73.875	1.8239					13	8	2	0	0	0	0.79422	1	30169	30169		28.173	11.087	1	959410			19670	5601	9491	9530	22710	22710					0.10408129070549421
LLVIWTHL	8	Unmodified	_LLVIWTHL_					0	0	0		ENST00000257013.8_1_X:134166802-134167357:+|nuORF;nc|ENSG00000134590|O15255|RTL8C	ENST00000257013.8_1_X:134166802-134167357:+|nuORF	ENST00000257013.8_1_X:134166802-134167357:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	497.807845	993.601138	2.7802	0.001384	1.8058	0.00089895	4.586	0.002283	497.8085361024786	72.483	0.24011	73.813	73.672	73.913	1.3297	0.016323	-0.00011232	NaN	28.173	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	741740			19671	5601	9491	9530							0.10408129070549421
LLVKHLVL	8	Unmodified	_LLVKHLVL_					0	0	0			REV__ENST00000480064.1_1_3:52643285-52649409:-|nuORF	REV__ENST00000480064.1_1_3:52643285-52649409:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	934.5639526247978	1	934.6448	933.637523	2.3405	0.0021875	-1.1554	-0.0010798	1.1851	0.0011077	934.6442442819326	89.023	0.15987	89.023	88.955	89.115	0					5	4	2	0	0	0	2.3239	1	37204	37204		0.79363	0	1	172010	+		19672	10707	9492	9531	22711	22711					0.168050059672737
LLVKMVEVHL	10	Unmodified	_LLVKMVEVHL_					0	0	0			REV__ARFGEF3|p.Q112H|1|0.46|ENSG00000112379|chr6:138210026-138210026|G/T|missense_variant	REV__ARFGEF3|p.Q112H|1|0.46|ENSG00000112379|chr6:138210026-138210026|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2418090701103	3	394.24226	1179.70495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.585	1	43.909	43.409	44.409	0.32389								0	0	0	0.64559	1	18298	18298		11.518	3.0736	1		+		19673	8134	9493	9532	22712	22712					0.12228668115926666
LLVKPAIRVRK	11	Unmodified	_LLVKPAIRVRK_					0	0	0			REV__ENST00000536066.1_1_12:2967806-2973707:-|nuORF	REV__ENST00000536066.1_1_12:2967806-2973707:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	646.9499999880791	2	646.948082	1291.88161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.183	1	12.272	11.772	12.772	0.089381								0	0	0	0.63775	1	5055	5055		2.9952	1.6657	1		+		19674	8247	9494	9533	22713	22713					0.24734465061192168
LLVKTSRPA	9	Unmodified	_LLVKTSRPA_					0	0	0		nc|ENSG00000140479|P29122-2|PCSK6;nc|ENSG00000140479|P29122-8|PCSK6;ENSG00000140479|ENST00000611716|PCSK6;nc|ENSG00000140479|P29122-7|PCSK6;nc|ENSG00000140479|P29122-6|PCSK6;nc|ENSG00000140479|P29122-5|PCSK6;nc|ENSG00000140479|P29122-4|PCSK6;nc|ENSG00000140479|P29122-3|PCSK6	nc|ENSG00000140479|P29122-2|PCSK6	nc|ENSG00000140479|P29122-2|PCSK6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2411376833916	2	492.813659	983.612765	2.0677	0.001019	-1.5339	-0.00075593	0.53378	0.00026305	492.81278903325034	43.111	0.30246	45.032	44.84	45.142	1.9211					12	9	2	0	0	0	0.11898	1	17995	17995		2.3027	0	1	1194200			19675	2921	9495	9534	22714	22714					0.12030326093884014
LLVLIIILVKK	11	Unmodified	_LLVLIIILVKK_					0	0	0			REV__tr|A0A7D6ZRJ0|A0A7D6ZRJ0_9CLOTDUF4829domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12660PE=4SV=1	REV__tr|A0A7D6ZRJ0|A0A7D6ZRJ0_9CLOTDUF4829domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12660PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	422.3499328494072	3	422.315865	1263.92577	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.08	1	100.08	99.577	100.58	0								0	0	0	0.63775	1	41895	41895		0	0	1		+		19676	15690	9496	9535	22715	22715					0.30436056434837155
LLVLKKVPY	9	Unmodified	_LLVLKKVPY_					0	0	0			REV__tr|A0A553SGV9|A0A553SGV9_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_11625PE=4SV=1	REV__tr|A0A553SGV9|A0A553SGV9_NIACIAlpha/betafoldhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_11625PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2426330447197	3	358.242477	1071.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.952	1	40.789	40.289	41.289	1.8366								0	0	0	0.42693	1	16332	16332		4.897	0.36815	1		+		19677	14770	9497	9536	22716	22716					0.17261830827260383
LLVLLVPLAP	10	Unmodified	_LLVLLVPLAP_					0	0	0		ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3632079958916	2	524.362453	1046.71035	1.412	0.00074038	0.018028	9.4531E-06	1.43	0.00074984	524.3622100728865	109.45	0.48704	109.45	109.3	109.79	0					49	20	3	0	0	0	0.89803	1	47327	47327		0.45834	0	1	15850000			19678	5536	9498	9537	22717	22717					0.18886714970039975
LLVLLVPLAP	10	Unmodified	_LLVLLVPLAP_					0	0	0		ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	524.362453	1046.71035	2.9242	0.0015333	-1.0431	-0.00054695	1.8811	0.00098638	524.3616007433058	109.44	0.49236	109.49	109.29	109.78	0.048843	-0.019627	-0.00064481	NaN	0.45834	40	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9099700			19679	5536	9498	9537							0.18886714970039975
LLVLLVPLAP	10	Unmodified	_LLVLLVPLAP_					0	0	0		ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	524.362453	1046.71035	3.2266	0.0016919	-0.95742	-0.00050203	2.2692	0.0011899	524.3615276170573	109.4	0.52673	109.55	109.31	109.84	0.15898	0.042785	-0.00055498	NaN	0.45834	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10479000			19680	5536	9498	9537							0.18886714970039975
LLVLLVPLAP	10	Unmodified	_LLVLLVPLAP_					0	0	0		ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	ENST00000225964.9_1_17:48265286-48266811:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	524.362453	1046.71035	3.2445	0.0017013	0.52464	0.0002751	3.7691	0.0019764	524.3623116485978	109.39	0.55563	109.55	109.3	109.86	0.1548	0.034291	0.00099929	NaN	0.45834	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7978900			19681	5536	9498	9537							0.18886714970039975
LLVLRTQTKPV	11	Unmodified	_LLVLRTQTKPV_					0	0	0		ENST00000330938.7_1_21:46285320-46293557:-|nuORF;ENST00000480234.1_1_21:46285323-46293531:-|nuORF	ENST00000330938.7_1_21:46285320-46293557:-|nuORF	ENST00000330938.7_1_21:46285320-46293557:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3738891482353	2	634.408455	1266.80236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.686	1	96.088	95.588	96.588	0.40208								0	0	0	0.6377	1	40260	40260		12.241	4.6317	1				19682	5891	9499	9538	22718	22718					0.17962773316389757
LLVLTMYKV	9	Unmodified	_LLVLTMYKV_					0	0	0		tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	tr|A0A7D6VNV5|A0A7D6VNV5_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3312866091728	2	540.330296	1078.64604	1.695	0.00091584	1.5559	0.00084069	3.2509	0.0017565	540.3311474663974	71.38	1.2424	71.704	71.399	72.641	0.32359					68	38	2	0	0	0	0.75267	1	29983	29983		5.2307	0	1	1742100			19683	16747	9500	9539	22719	22719					0.1098619182157563
LLVLVLKKHK	10	Unmodified	_LLVLVLKKHK_					0	0	0			REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.9219238162041	2	595.921001	1189.82745	1.5515	0.00092458	-1.6857	-0.0010046	-0.13424	-7.9997E-05	595.9200127268051	104	0.9526	104	103.2	104.15	0					124	47	3	0	0	0	0.89803	2	43673	43673;43752		0	0	1	29848000	+		19684	15670	9501	9540	22720;22721	22720					0.24012872909634098
LLVLVLKKHK	10	Unmodified	_LLVLVLKKHK_					0	0	0			REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.9202148318291	2	595.921001	1189.82745	1.5503	0.00092387	-1.4862	-0.00088568	0.064085	3.8189E-05	595.9199200168066	104.75	0.83846	104.75	104.31	105.15	0					87	43	3	0	0	0	0.89803	3	44154	44154;44264;44434		0	0	1	50528000	+		19685	15670	9501	9540	22722;22723;22724	22722					0.24012872909634098
LLVLVLKKHK	10	Unmodified	_LLVLVLKKHK_					0	0	0			REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.9211913943291	2	595.921001	1189.82745	1.5482	0.00092259	-0.3307	-0.00019707	1.2175	0.00072552	595.9204635131734	105.4	0.25255	105.4	105.25	105.5	0					22	12	2	0	0	0	0.89803	1	44723	44723		0	0	1	26100000	+		19686	15670	9501	9540	22725	22725					0.24012872909634098
LLVLVLKKHK	10	Unmodified	_LLVLVLKKHK_					0	0	0			REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	REV__tr|A0A7D6ZJ81|A0A7D6ZJ81_9CLOTGer(X)CfamilysporegerminationproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07605PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	595.921001	1189.82745	1.5482	0.00092259	-0.3307	-0.00019707	1.2175	0.00072552	595.9204635131734	105.4	0.25255	105.4	105.25	105.5	0	0	0	NaN	0	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26100000	+		19687	15670	9501	9540							0.24012872909634098
LLVMDAPELL	10	Unmodified	_LLVMDAPELL_					0	0	0			REV__ENSG00000173442|ENST00000309295|EHBP1L1	REV__ENSG00000173442|ENST00000309295|EHBP1L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	557.3157226443291	2	557.314843	1112.61513	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.432	1	59.432	58.932	59.932	0								0	0	0	0.64816	1	24781	24781		15.847	0	1		+		19688	11098	9502	9541	22726	22726					0.06332993716682722
LLVNKLKIDRH	11	Unmodified	_LLVNKLKIDRH_					0	0	0			REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	337.9031249880791	4	337.96604	1347.83505	1.2112	0.00040934	-0.76202	-0.00025754	0.44915	0.0001518	337.96561273523736	50.292	1.1499	50.62	50.048	51.197	0.32824					69	36	3	0	0	0	0.14606	1	21293	21293		7.4771	2.7611	1	5310800	+		19689	9869	9503	9542	22727	22727					0.17504980439230167
LLVNKLKIDRH	11	Unmodified	_LLVNKLKIDRH_					0	0	0			REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9031860232353	4	337.96604	1347.83505	0.75772	0.00025608	-2.0014	-0.00067642	-1.2437	-0.00042034	337.96478096382253	49.436	0.71336	50.827	50.421	51.135	1.3911					46	22	3	0	0	0	0.14606	1	20676	20676		4.7159	2.0847	1	7681900	+		19690	9869	9503	9542	22728	22728					0.17504980439230167
LLVNKLKIDRH	11	Unmodified	_LLVNKLKIDRH_					0	0	0			REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	REV__nc|ENSG00000133059|Q6XUX3-2|DSTYK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9031249880791	4	337.96604	1347.83505	1.4129	0.00047751	-3.0926	-0.0010452	-1.6797	-0.00056769	337.96450105538315	48.723	0.74042	50.7	50.297	51.038	1.9772					59	23	3	0	0	0	0.14606	1	20520	20520		7.4771	2.7611	1	7124500	+		19691	9869	9503	9542	22729	22729					0.17504980439230167
LLVPCVSCKL	10	Unmodified	_LLVPCVSCKL_					0	0	0		ENST00000472524.1_1_11:64122872-64124957:+|nuORF	ENST00000472524.1_1_11:64122872-64124957:+|nuORF	ENST00000472524.1_1_11:64122872-64124957:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3070556521416	2	537.806131	1073.59771	3.7085	0.0019945	-0.17169	-9.2334E-05	3.5369	0.0019021	538.3060230818127	90.996	0.41137	92.362	92.124	92.535	1.366					30	12	3	0	0	0	0.62746	1	38284	38284		21.747	0	1	2009700			19692	6752	9504	9543	22730	22730					0.06385374910018982
LLVPEPGLAK	10	Unmodified	_LLVPEPGLAK_					0	0	0			REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1403076052666	2	518.823692	1035.63283	1.6082	0.00083439	-4.2938	-0.0022277	-2.6855	-0.0013933	519.3236739834508	69.008	0.94139	69.331	68.905	69.847	0.32224					46	29	4	0	0	0	0.12493	1	28917	28917		6.7232	1.9672	1	849100	+		19693	9910	9505	9544	22731	22731					0.11644077033838585
LLVQGGVG	8	Unmodified	_LLVQGGVG_					0	0	0		nc|ENSG00000120802|P42166|TMPO	nc|ENSG00000120802|P42166|TMPO	nc|ENSG00000120802|P42166|TMPO	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	372.2202331423759	2	371.726521	741.438489	0.47772	0.00017758	3.2737	0.0012169	3.7514	0.0013945	371.72762647816637	29.512	0.36361	31.31	31.143	31.506	1.7987					15	11	2	0	0	0	2.3239	1	12423	12423		0.69038	0	1	2051200			19694	7860	9506	9545	22732	22732					0.057427456685900324
LLVRHRDLK	9	Unmodified	_LLVRHRDLK_					0	0	0		ENSG00000168071|ENST00000356786|CCDC88B;ENST00000463837.5_1_11:64118923-64120763:+|nuORF;nc|ENSG00000168071|A6NC98-5|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	ENSG00000168071|ENST00000356786|CCDC88B	MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3672973513603	2	575.364382	1148.71421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.935	1	69.935	69.435	70.435	0								0	0	0	0.42693	1	29121	29121		0.6015	0	1				19695	4014	9507	9546	22733	22733					0.1458019751644315
LLVRKQHV	8	Unmodified	_LLVRKQHV_					0	0	0			REV__nc|ENSG00000105662|Q6UUV9-3|CRTC1	REV__nc|ENSG00000105662|Q6UUV9-3|CRTC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	496.8214599490166	2	496.821818	991.629084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.887	1	53.887	53.387	54.387	0								0	0	0	1.0178	1	22465	22465		6.3541	0	1		+		19696	9186	9508	9547	22734	22734					0.13293452050652377
LLVRLLLVL	9	Unmodified	_LLVRLLLVL_					0	0	0			REV__ENST00000378944.9_1_19:36276198-36277438:+|nuORF	REV__ENST00000378944.9_1_19:36276198-36277438:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.6450683474541	2	526.38372	1050.75289	3.3328	0.0017544	-0.34364	-0.00018088	2.9892	0.0015735	526.3837441632816	92.728	1.0613	94.006	93.519	94.58	1.277					51	32	2	0	0	0	0.097511	1	39054	39054		16.942	0	1	383200	+		19697	12743	9509	9548	22735	22735					0.22954110098271485
LLVRRRFI	8	Unmodified	_LLVRRRFI_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.5768310427666	3	358.241582	1071.70292	1.0927	0.00039145	1.227	0.00043955	2.3197	0.000831	358.5765707073648	39.478	0.35737	40.788	40.489	40.846	1.3102					17	11	2	0	0	0	2.3239	1	16575	16575		3.9444	0	1	937320			19698	803	9510	9549	22736	22736					0.16993420212975252
LLVSNQDCY	9	Unmodified	_LLVSNQDCY_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|54|2|sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|54|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7466918826103	2	527.747324	1053.4801	1.939	0.0010233	-3.6721	-0.0019379	-1.7331	-0.00091463	527.7449294767672	67.173	0.43927	67.496	67.366	67.805	0.32269					19	14	2	0	0	0	0.77526	1	28167	28167		4.3292	1.44	1	486690	+		19699	14275	9511	9550	22737	22737					-0.04450486425071176
LLVSPTPSRLL	11	Unmodified	_LLVSPTPSRLL_					0	0	0		ENST00000358015.7_1_9:110045607-110045667:+|nuORF	ENST00000358015.7_1_9:110045607-110045667:+|nuORF	ENST00000358015.7_1_9:110045607-110045667:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2517272830009	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.101	1	34.398	33.898	34.898	0.29701								0	0	0	0.63775	1	14320	14320		2.2527	0.51045	1				19700	6003	9512	9551	22738	22738					0.14403109016711824
LLVSREELF	9	Unmodified	_LLVSREELF_					0	0	0			REV__nc|ENSG00000127914|Q99996-5|AKAP9	REV__nc|ENSG00000127914|Q99996-5|AKAP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3155395388603	2	553.316232	1104.61791	2.4392	0.0013497	0.42525	0.0002353	2.8645	0.001585	553.3167142797598	49.984	0.57012	51.375	51.197	51.767	1.3911					31	17	3	0	0	0	0.13873	1	20895	20895		39.957	0.0076237	1	3302200	+		19701	9722	9513	9552	22739	22739					0.06978585165848017
LLVSRLSTL	9	Unmodified	_LLVSRLSTL_					0	0	0		ENST00000592474.1_1_17:74309820-74309979:-|nuORF;ENST00000472686.1_1_17:74309820-74324990:-|nuORF	ENST00000592474.1_1_17:74309820-74309979:-|nuORF	ENST00000592474.1_1_17:74309820-74309979:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	501.7940856814384	2	501.321317	1000.62808	2.3507	0.0011784	3.6738	0.0018418	6.0245	0.0030202	501.3230874243024	73.17	0.2231	74.98	74.86	75.083	1.8101					10	6	2	0	0	0	0.10306	1	30650	30650		19.439	0	1	404270			19702	6758	9514	9553	22740	22740					0.1277919289109377
LLVTKGKSK	9	Unmodified	_LLVTKGKSK_					0	0	0			REV__tr|A0A7D7AE40|A0A7D7AE40_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01385PE=4SV=1	REV__tr|A0A7D7AE40|A0A7D7AE40_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01385PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2171203494072	3	325.218332	972.633166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.588	1	12.349	11.849	12.849	0.76165								0	0	0	0.42693	1	4812	4812		1.1933	0.735	1		+		19703	15912	9515	9554	22741	22741					0.14575496753707284
LLVTKGKSK	9	Unmodified	_LLVTKGKSK_					0	0	0			REV__tr|A0A7D7AE40|A0A7D7AE40_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01385PE=4SV=1	REV__tr|A0A7D7AE40|A0A7D7AE40_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01385PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2166015505791	3	325.218332	972.633166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.711	1	12.499	11.999	12.999	0.78751								0	0	0	0.42693	1	4862	4862		1.1933	0.735	1		+		19704	15912	9515	9554	22742	22742					0.14575496753707284
LLVTTEWSG	9	Unmodified	_LLVTTEWSG_					0	0	0			REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.2661926150322	2	503.266207	1004.51786	1.8266	0.00091925	-4.3547	-0.0021916	-2.5281	-0.0012723	503.2638779665791	94.41	0.33534	94.41	94.18	94.516	0					18	10	2	0	0	0	0.68551	1	39415	39415		7.9102	2.1497	1	763450	+		19705	12523	9516	9555	22743	22743					0.01578347832048621
LLVTTEWSG	9	Unmodified	_LLVTTEWSG_					0	0	0			REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	503.266207	1004.51786	1.8266	0.00091925	-4.3547	-0.0021916	-2.5281	-0.0012723	503.2638779665791	94.41	0.33534	94.41	94.18	94.516	0	0.2834	0.00063399	NaN	7.9102	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	763450	+		19706	12523	9516	9555							0.01578347832048621
LLVTTEWSG	9	Unmodified	_LLVTTEWSG_					0	0	0			REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	REV__ENST00000345094.7_1_3:9404786-9406727:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	503.266207	1004.51786	3.1503	0.0015854	-4.9391	-0.0024857	-1.7888	-0.00090027	503.2636685547133	93.972	0.38254	94.117	93.878	94.261	0.14493	-0.0095244	4.5741E-05	NaN	7.9102	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	596330	+		19707	12523	9516	9555							0.01578347832048621
LLVVDFYLT	9	Unmodified	_LLVVDFYLT_					0	0	0			REV__FKBP10|p.R178Tfs*36|1|0.41|ENSG00000141756|chr17:41818219-41818220|-/GACTTTGT|frameshift_variant	REV__FKBP10|p.R178Tfs*36|1|0.41|ENSG00000141756|chr17:41818219-41818220|-/GACTTTGT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.2794067263603	2	541.810251	1081.60595	2.184	0.0011833	-0.0037554	-2.0347E-06	2.1802	0.0011813	541.8101621550255	71.655	0.2519	73.479	73.349	73.601	1.824					11	7	2	0	0	0	0.11463	1	30045	30045		7.9102	0	1	599330	+		19708	10165	9517	9556	22744	22744					0.06840968422648075
LLVVRRLLAR	10	Unmodified	_LLVVRRLLAR_					0	0	0		nc|ENSG00000266714|Q96JP2-2|MYO15B;ENSG00000266714|ENST00000645453|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9208251833916	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.925	1	13.925	13.425	14.425	0								0	0	0	0.6624	1	5773	5773		0.40072	0	1				19709	5436	9518	9557	22745	22745					0.22849622855665075
LLVVRRLLAR	10	Unmodified	_LLVVRRLLAR_					0	0	0		nc|ENSG00000266714|Q96JP2-2|MYO15B;ENSG00000266714|ENST00000645453|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9203979372978	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.074	1	14.074	13.574	14.574	0								0	0	0	0.6624	1	5838	5838		0.40072	0	1				19710	5436	9518	9557	22746	22746					0.22849622855665075
LLVVRRLLAR	10	Unmodified	_LLVVRRLLAR_					0	0	0		nc|ENSG00000266714|Q96JP2-2|MYO15B;ENSG00000266714|ENST00000645453|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9225341677666	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.502	1	14.502	14.002	15.002	0								0	0	0	0.6624	1	6017	6017		0.40072	0	1				19711	5436	9518	9557	22747	22747					0.22849622855665075
LLVVRRLLAR	10	Unmodified	_LLVVRRLLAR_					0	0	0		nc|ENSG00000266714|Q96JP2-2|MYO15B;ENSG00000266714|ENST00000645453|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9219848513603	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.528	1	15.528	15.028	16.028	0								0	0	0	0.6624	1	6446	6446		0.40072	0	1				19712	5436	9518	9557	22748	22748					0.22849622855665075
LLVVRRLLAR	10	Unmodified	_LLVVRRLLAR_					0	0	0		nc|ENSG00000266714|Q96JP2-2|MYO15B;ENSG00000266714|ENST00000645453|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9227172732353	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.141	1	17.141	16.641	17.641	0								0	0	0	0.6624	1	7114	7114		0.40072	0	1				19713	5436	9518	9557	22749	22749					0.22849622855665075
LLVWLLVLRLP	11	Unmodified	_LLVWLLVLRLP_					0	0	0		MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant;MIA3|p.K467Efs*16|1|0.07|ENSG00000154305|chr1:222628615-222628624|AGGAAAAGGG/-|frameshift_variant;nc|ENSG00000154305|Q5JRA6-3|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENSG00000154305|ENST00000344922|MIA3	MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant	MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4787475466728	4	334.478518	1333.88496	0.06351	2.1243E-05	-0.8007	-0.00026782	-0.73719	-0.00024657	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	2	10491	10491;10543		0.094841	0	1	234860000			19714	3383	9519	9558	22750;22751	22750					0.23137715115194624
LLVWLLVLRLP	11	Unmodified	_LLVWLLVLRLP_					0	0	0		MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant;MIA3|p.K467Efs*16|1|0.07|ENSG00000154305|chr1:222628615-222628624|AGGAAAAGGG/-|frameshift_variant;nc|ENSG00000154305|Q5JRA6-3|MIA3;ENST00000470521.1_1_1:222791452-222819114:+|nuORF;nc|ENSG00000154305|Q5JRA6-2|MIA3;ENSG00000154305|ENST00000344922|MIA3	MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant	MIA3|p.R129Tfs*13|1|0.1|ENSG00000154305|chr1:222627605-222627606|-/CCATGCCCAGCCCCCCATCTGATTGTTTTGT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	335.2190429568291	4	334.478518	1333.88496	0.22093	7.3897E-05	-0.075353	-2.5204E-05	0.14558	4.8693E-05	334.47832916761513	28.524	0.90407	30.299	30.061	30.965	1.7754					51	29	3	0	0	0	0.14606	1	12225	12225		0	0	1	1684000			19715	3383	9519	9558	22752	22752					0.23137715115194624
LLWAWVHSL	9	Unmodified	_LLWAWVHSL_					0	0	0		ENSG00000170925|ENST00000302917|TEX13B	ENSG00000170925|ENST00000302917|TEX13B	ENSG00000170925|ENST00000302917|TEX13B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.3451415896416	2	562.816202	1123.61785	1.9871	0.0011184	3.1061	0.0017481	5.0932	0.0028665	562.8173249679562	71.51	0.50361	73.334	73.191	73.694	1.824					31	15	3	0	0	0	0.11645	1	30097	30097		8.5933	0.68312	1	4263900			19716	4167	9520	9559	22753	22753					0.0609862995650019
LLWCHPPCP	9	Unmodified	_LLWCHPPCP_					0	0	0		ENST00000562680.5_1_18:52898151-52898265:-|nuORF	ENST00000562680.5_1_18:52898151-52898265:-|nuORF	ENST00000562680.5_1_18:52898151-52898265:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0693542361259	3	355.838469	1064.49358	-1.0478	-0.00037284	-1.6765	-0.00059656	-2.7243	-0.0009694	355.83801324560636	73.074	0.34532	73.074	72.903	73.248	0					16	10	2	0	0	0	0.11891	1	30442	30442		0.26902	0.033176	1	933070			19717	7337	9521	9560	22754	22754					-0.03608907126840677
LLWDKRFR	8	Unmodified	_LLWDKRFR_					0	0	0		ENST00000339174.9_2_Y:16636629-16636785:+|nuORF	ENST00000339174.9_2_Y:16636629-16636785:+|nuORF	ENST00000339174.9_2_Y:16636629-16636785:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3314086794853	2	567.33255	1132.65055	2.677	0.0015188	-2.3908	-0.0013564	0.28621	0.00016237	567.3310613782425	73.454	1.2245	75.25	74.184	75.409	1.7962					84	38	3	0	0	0	0.89008	1	30582	30582		2.5775	0.51773	1	3948400			19718	5926	9522	9561	22755	22755					0.08952837079368692
LLWDPEYLP	9	Unmodified	_LLWDPEYLP_					0	0	0		nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;ENSG00000198160|ENST00000401041|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	382.5334960818291	3	382.534097	1144.58046	0.60333	0.00023079	-1.2897	-0.00049334	-0.68634	-0.00026255	382.5333443200318	86.261	0.41867	86.261	86.008	86.427	0					25	13	2	0	0	0	0.81521	1	35961	35961		2.7352	0	1	5216500			19719	5043	9523	9562	22756	22756					0.013954939002360334
LLWDPEYLP	9	Unmodified	_LLWDPEYLP_					0	0	0		nc|ENSG00000198160|Q8N108-19|MIER1;nc|ENSG00000198160|Q8N108-16|MIER1;nc|ENSG00000198160|Q8N108-14|MIER1;nc|ENSG00000198160|Q8N108-18|MIER1;nc|ENSG00000198160|Q8N108-17|MIER1;nc|ENSG00000198160|Q8N108-15|MIER1;nc|ENSG00000198160|Q8N108|MIER1;nc|ENSG00000198160|Q8N108-13|MIER1;ENSG00000198160|ENST00000401041|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	nc|ENSG00000198160|Q8N108-19|MIER1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	382.534097	1144.58046	2.5074	0.00095916	-3.2598	-0.001247	-0.75238	-0.00028781	382.5325932520464	86.078	0.45541	86.33	86.068	86.524	0.25227	0.034336	-0.0010986	NaN	2.7352	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3324200			19720	5043	9523	9562							0.013954939002360334
LLWEKVWRFLK	11	Unmodified	_LLWEKVWRFLK_					0	0	0		L1MB3_dup13915|chr15:92712904-92713305:+|1.0833414765900655|0.0952392372427663|3.51|429.0|15|3|sense	L1MB3_dup13915|chr15:92712904-92713305:+|1.0833414765900655|0.0952392372427663|3.51|429.0|15|3|sense	L1MB3_dup13915|chr15:92712904-92713305:+|1.0833414765900655|0.0952392372427663|3.51|429.0|15|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2480041384697	5	304.385645	1516.89184	0.66119	0.00020126	-0.81641	-0.0002485	-0.15522	-4.7245E-05	304.3860681813689	38.774	0.094574	40.07	40.007	40.101	1.2961					4	2	2	0	0	0	0.14606	1	16257	16257		0	0	1	371120			19721	7699	9524	9563	22757	22757					0.15407027995775024
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1226.658862292767	1	1226.65682	1225.64954	2.1411	0.0026263	-0.72268	-0.00088648	1.4184	0.0017399	1226.656564034172	92.521	0.36111	92.521	92.321	92.682	0					27	11	3	0	0	0	0.12312	2	38672	38608;38672		51.63	28.894	1	3247400			19722	3693	9525	9564	22758;22759	22759					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.8328124880791	2	613.832049	1225.64954	2.3412	0.0014371	-0.76697	-0.00047079	1.5742	0.0009663	613.8317591037578	92.517	0.69278	92.517	92.228	92.921	0					70	22	5	0	0	0	0.11956	4	38666	38636;38666;38717;38779		52.268	17.867	1	38923000			19723	3693	9525	9564	22760;22761;22762;22763	22761					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.8336059451103	2	613.832049	1225.64954	2.5547	0.0015681	-0.22447	-0.00013779	2.3302	0.0014303	613.8318868336241	92.032	0.66377	92.222	91.949	92.613	0.19042					75	20	6	0	0	0	0.056754	4	38593	38471;38517;38554;38593		65.235	29.108	1	36706000			19724	3693	9525	9564	22764;22765;22766;22767	22767					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1226.661425769329	1	1226.65682	1225.64954	3.8328	0.0047015	-2.4042	-0.0029491	1.4286	0.0017524	1226.6544268869563	92.096	0.41769	92.286	92.047	92.465	0.19042					22	12	2	0	0	0	0.024558	2	38545	38498;38545		96.111	62.008	1	3732200			19725	3693	9525	9564	22768;22769	22769					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.8344604372978	2	613.832049	1225.64954	3.9771	0.0024413	0.45021	0.00027635	4.4273	0.0027176	613.8324568302583	91.199	0.69629	92.18	91.878	92.575	0.98157					77	21	5	0	0	0	0.087153	6	38374	38331;38374;38413;38452;38492;38535		58.679	22.552	1	62093000			19726	3693	9525	9564	22770;22771;22772;22773;22774;22775	22771					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1226.661303699017	1	1226.65682	1225.64954	3.7346	0.0045811	-0.026948	-3.3056E-05	3.7077	0.004548	1226.6571191739827	91.23	0.37917	92.211	92.006	92.385	0.98157					31	11	3	0	0	0	0.031246	3	38416	38364;38416;38459		78.728	49.646	1	7372200			19727	3693	9525	9564	22776;22777;22778	22777					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.8346435427666	2	613.832049	1225.64954	3.6125	0.0022175	0.5036	0.00030913	4.1162	0.0025266	613.8323840844645	90.774	0.63977	92.14	91.831	92.471	1.366					81	19	6	0	0	0	0.11956	6	38178	38141;38178;38215;38254;38293;38336		52.268	24.64	1	47994000			19728	3693	9525	9564	22779;22780;22781;22782;22783;22784	22780					0.04574577919811418
LLWEPAGAWLA	11	Unmodified	_LLWEPAGAWLA_					0	0	0		nc|ENSG00000163520|P98095|FBLN2;ENSG00000163520|ENST00000404922|FBLN2	nc|ENSG00000163520|P98095|FBLN2	nc|ENSG00000163520|P98095|FBLN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1226.660082995892	1	1226.65682	1225.64954	2.7325	0.0033518	0.82268	0.0010091	3.5551	0.0043609	1226.6585683028316	90.805	0.38112	92.171	91.961	92.342	1.366					20	11	2	0	0	0	0.041084	3	38243	38193;38243;38289		69.105	42.221	1	6785600			19729	3693	9525	9564	22785;22786;22787	22786					0.04574577919811418
LLWEVVSQL	9	Unmodified	_LLWEVVSQL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8166992068291	2	543.813325	1085.6121	5.3048	0.0028848	1.0023	0.00054504	6.3071	0.0034299	543.8138692723642	89.329	0.32126	90.349	90.203	90.524	1.0199					11	9	2	0	0	0	0.37357	1	37654	37654		21.747	5.8995	1	711220			19730	929	9526	9565	22788	22788					0.07271486654190085
LLWEVVSQL	9	Unmodified	_LLWEVVSQL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	543.813325	1085.6121	4.6997	0.0025558	-1.4716	-0.00080026	3.2281	0.0017555	543.8126013253711	88.939	0.2565	90.386	90.21	90.467	1.4467	0.018696	-0.0012319	NaN	21.747	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625410			19731	929	9526	9565							0.07271486654190085
LLWFKLTFL	9	Unmodified	_LLWFKLTFL_					0	0	0		ENST00000522522.5_1_1:243375035-243388582:-|nuORF	ENST00000522522.5_1_1:243375035-243388582:-|nuORF	ENST00000522522.5_1_1:243375035-243388582:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2447997927666	3	394.242477	1179.7056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.961	1	93.13	92.63	93.63	0.16835								0	0	0	0.42693	1	38925	38925		0.20686	0	1				19732	7093	9527	9566	22789	22789					0.12293830827275087
LLWFLEHVAD	10	Unmodified	_LLWFLEHVAD_					0	0	0		ENST00000209875.8_1_12:54635117-54635186:-|nuORF	ENST00000209875.8_1_12:54635117-54635186:-|nuORF	ENST00000209875.8_1_12:54635117-54635186:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	621.8305541872978	2	621.829506	1241.64446	2.8827	0.0017925	-0.74943	-0.00046602	2.1332	0.0013265	621.8291766431803	85.722	0.49725	85.722	85.417	85.914	0					26	15	3	0	0	0	0.846	1	35695	35695		7.2892	1.0834	1	964860			19733	5512	9528	9567	22790	22790					0.033302740571798495
LLWFLEHVAD	10	Unmodified	_LLWFLEHVAD_					0	0	0		ENST00000209875.8_1_12:54635117-54635186:-|nuORF	ENST00000209875.8_1_12:54635117-54635186:-|nuORF	ENST00000209875.8_1_12:54635117-54635186:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	621.829506	1241.64446	2.4628	0.0015314	0.25082	0.00015596	2.7136	0.0016874	621.8299091629184	85.194	0.62279	85.446	85.228	85.851	0.25227	-0.13812	0.00047655	NaN	7.2892	29	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	424300			19734	5512	9528	9567							0.033302740571798495
LLWFWKRTWTL	11	Unmodified	_LLWFWKRTWTL_					0	0	0		ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	775.9386474490166	2	775.437547	1548.86054	1.77	0.0013725	-2.7128	-0.0021036	-0.94279	-0.00073108	775.936976995387	42.177	0.40902	42.498	42.257	42.666	0.32058					41	13	4	0	0	0	1.0388	1	17772	17772		0.35063	0.081612	1	6434900			19735	6302	9529	9568	22791	22791					0.10806454961675627
LLWFWKRTWTL	11	Unmodified	_LLWFWKRTWTL_					0	0	0		ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	775.9381591677666	2	775.437547	1548.86054	1.7777	0.0013785	-2.9629	-0.0022976	-1.1853	-0.00091911	775.4351449342698	40.128	0.36972	41.438	41.207	41.577	1.3102					31	11	4	0	0	0	1.0365	1	16810	16810		0.26902	0	1	5985600			19736	6302	9529	9568	22792	22792					0.10806454961675627
LLWFWKRTWTL	11	Unmodified	_LLWFWKRTWTL_					0	0	0		ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.7986328005791	3	517.294123	1548.86054	2.5169	0.001302	-4.0019	-0.0020702	-1.485	-0.00076818	517.6251281498347	63.166	0.90747	65.11	64.469	65.377	1.9444					43	28	2	0	0	0	0.14606	1	26614	26614		5.0475	2.4163	1	1384000			19737	6302	9529	9568	22793	22793					0.10806454961675627
LLWGDLIWL	9	Unmodified	_LLWGDLIWL_					0	0	0		ENST00000566424.1_1_16:29469201-29469442:+|nuORF;ENST00000395400.4_1_16:29468907-29472819:+|nuORF;nc|ENSG00000181625|Q9BQ83-2|SLX1A;ENST00000561824.5_1_16:30205929-30212162:+|nuORF;ENSG00000181625|ENST00000330181|SLX1B;ENSG00000132207|ENST00000251303|SLX1A;ENST00000565219.1_1_16:29466524-29469442:+|nuORF	ENST00000566424.1_1_16:29469201-29469442:+|nuORF	ENST00000566424.1_1_16:29469201-29469442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1128.649584949017	1	1128.64519	1127.63792	1.3527	0.0015267	2.3774	0.0026833	3.7301	0.00421	1128.6474686075064	99.842	0.14674	99.842	99.736	99.883	0					5	4	2	0	0	0	0.10722	1	41803	41803		46.921	8.9469	1	5336600			19738	2518	9530	9569	22794	22794					0.0792038089646212
LLWGHPRVALA	11	Unmodified	_LLWGHPRVALA_					0	0	0		MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant;ENSG00000101825|ENST00000217939|MXRA5	MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant	MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	411.5803100466728	3	411.580264	1231.71896	1.5946	0.00065629	1.1936	0.00049126	2.7882	0.0011475	411.5807703054254	42.417	0.38332	43.757	43.508	43.891	1.3399					25	11	3	0	0	0	0.29237	2	17748	17748;17796		25.997	9.8483	1	991000			19739	1366	9531	9570	22795;22796	22795					0.11237081659237447
LLWGHPRVALA	11	Unmodified	_LLWGHPRVALA_					0	0	0		MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant;ENSG00000101825|ENST00000217939|MXRA5	MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant	MXRA5|p.T1002Sfs*13|1|0.03|ENSG00000101825|chrX:3322682-3322683|-/AAGCCTACAGGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	411.5815612673759	3	411.580264	1231.71896	1.6944	0.00069739	0.59597	0.00024529	2.2904	0.00094268	411.5806556450154	41.831	0.31731	43.724	43.541	43.859	1.8927					22	9	3	0	0	0	0.37492	1	17514	17514		27.088	10.939	1	1365600			19740	1366	9531	9570	22797	22797					0.11237081659237447
LLWHLCSW	8	Unmodified	_LLWHLCSW_					0	0	0		nc|ENSG00000226777|Q9NZY2|FAM30A	nc|ENSG00000226777|Q9NZY2|FAM30A	nc|ENSG00000226777|Q9NZY2|FAM30A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.2705566287041	2	529.26803	1056.52151	2.1035	0.0011133	2.3879	0.0012638	4.4914	0.0023772	529.2689344738438	81.523	0.3526	81.523	81.349	81.701	0					19	11	2	0	0	0	0.89008	1	33979	33979		2.5775	0	1	2166000			19741	8002	9532	9571	22798	22798					-0.004492608750979343
LLWHTRTHLIL	11	Unmodified	_LLWHTRTHLIL_					0	0	0			REV__nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	REV__nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2834960818291	3	468.282106	1401.82449	3.6739	0.0017204	-1.348	-0.00063123	2.3259	0.0010892	468.28133981268934	73.44	1.4543	74.758	74.494	75.948	1.318					104	46	3	0	0	0	0.80586	1	30886	30886		8.7518	0	1	1785000	+		19742	10961	9533	9572	22799	22799					0.13964997784842126
LLWHTRTHLIL	11	Unmodified	_LLWHTRTHLIL_					0	0	0			REV__nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	REV__nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2827331423759	3	468.282106	1401.82449	2.9998	0.0014048	-1.3321	-0.0006238	1.6677	0.00078095	468.2811908167424	72.876	1.4671	74.687	74.385	75.852	1.8101					118	46	4	0	0	0	0.80586	2	30647	30647;30715		9.7643	0	1	2478900	+		19743	10961	9533	9572	22800;22801	22800					0.13964997784842126
LLWHVRVL	8	Unmodified	_LLWHVRVL_					0	0	0		ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1384155154228	2	518.326737	1034.63892	1.1357	0.00058866	-1.4044	-0.00072792	-0.26867	-0.00013926	518.3258141370056	56.429	0.27239	58.397	58.273	58.545	1.9684					12	8	2	0	0	0	2.3239	1	23721	23721		2.8892	0	1	1433000			19744	5863	9534	9573	22802	22802					0.12298640056019394
LLWHVRVL	8	Unmodified	_LLWHVRVL_					0	0	0		ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	ENST00000324348.8_2_17:7818314-7818512:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.326737	1034.63892	1.8257	0.00094633	-0.52193	-0.00027053	1.3038	0.0006758	518.3264712945512	57.049	0.24387	58.464	58.307	58.551	1.4145	0.033262	0.00043827	NaN	2.8892	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1314200			19745	5863	9534	9573							0.12298640056019394
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	724.9666625857353	2	724.964263	1447.91397	1.2254	0.00088835	2.3691	0.0017175	3.5945	0.0026059	724.9656510638915	32.465	0.53889	32.759	32.652	33.191	0.29431					29	17	2	0	0	0	1.0365	2	13683	13683;13737		2.9952	1.3426	1	3095200	+		19746	15942	9535	9574	22803;22804	22803					0.20793252464181933
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9883911013603	4	362.98577	1447.91397	1.0375	0.00037658	2.7243	0.00098887	3.7617	0.0013655	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.039	1	13757	13757		0.45452	0.046251	1	559590000	+		19747	15942	9535	9574	22805	22805					0.20793252464181933
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9875366091728	4	362.98577	1447.91397	1.1597	0.00042097	0.46377	0.00016834	1.6235	0.00058931	362.9860576598574	34.963	1.2235	35.263	34.602	35.825	0.29942					301	82	4	0	0	0	1.039	1	14550	14550		0.45452	0.37117	1	314680000	+		19748	15942	9535	9574	22806	22806					0.20793252464181933
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9877502322197	4	362.98577	1447.91397	-0.4714	-0.00017111	3.6451	0.0013231	3.1737	0.001152	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.039	1	13295	13295		0.45452	0.046251	1	563060000	+		19749	15942	9535	9574	22807	22807					0.20793252464181933
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9874145388603	4	362.98577	1447.91397	0.48914	0.00017755	3.1717	0.0011513	3.6608	0.0013288	362.9876474891707	31.174	1.2269	32.998	32.865	34.092	1.8246					99	44	3	0	0	0	1.039	1	13032	13032		0.45452	0.046251	1	335070000	+		19750	15942	9535	9574	22808	22808					0.20793252464181933
LLWIRLRLHTK	11	Unmodified	_LLWIRLRLHTK_					0	0	0			REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	REV__ZNF407|p.R271Lfs*14|1|0.33|ENSG00000215421|chr18:74631831-74631831|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9865295290947	4	362.98577	1447.91397	0.45921	0.00016669	0.63003	0.00022869	1.0892	0.00039538	362.9860279302442	33.018	1.1002	34.843	34.092	35.193	1.8246					257	70	5	0	0	0	1.039	2	13756	13756;13872		0.45452	0.37117	1	942270000	+		19751	15942	9535	9574	22809;22810	22809					0.20793252464181933
LLWLALALA	9	Unmodified	_LLWLALALA_					0	0	0			REV__ENSG00000099203|ENST00000214869|TMED1	REV__ENSG00000099203|ENST00000214869|TMED1	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3180114626884	2	492.318046	982.621539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.52	103.02	104.02	0.059502								0	0	0	0.42693	1	43400	43400		2.3027	0	1		+		19752	8944	9536	9575	22811	22811					0.12953299730349954
LLWLHGGV	8	Unmodified	_LLWLHGGV_					0	0	0			REV__ENST00000497824.5_1_1:156374348-156399265:-|nuORF	REV__ENST00000497824.5_1_1:156374348-156399265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	447.7651244997978	2	447.763438	893.512323	2.735	0.0012246	1.7805	0.00079726	4.5155	0.0020219	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89176	1	30629	30629		0.79363	0	1	26597000	+		19753	13482	9537	9576	22812	22812					0.061307138309075526
LLWLILQVKH	10	Unmodified	_LLWLILQVKH_					0	0	0		tr|A0A553SS53|A0A553SS53_NIACITwo-componentsensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02455PE=4SV=1	tr|A0A553SS53|A0A553SS53_NIACITwo-componentsensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02455PE=4SV=1	tr|A0A553SS53|A0A553SS53_NIACITwo-componentsensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02455PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	317.1956970095634	4	316.455042	1261.79106	1.4367	0.00045465	3.6858	0.0011664	5.1225	0.001621	316.70667712987887	40.449	0.44008	42.312	42.171	42.611	1.8624					16	13	2	0	0	0	0.12557	1	16910	16910		1.7423	0	1	644400			19754	16594	9538	9577	22813	22813					0.17063996012939242
LLWLIQDRPDR	11	Unmodified	_LLWLIQDRPDR_					0	0	0		nc|ENSG00000166508|P33993-3|MCM7;ENSG00000166508|ENST00000303887|MCM7	nc|ENSG00000166508|P33993-3|MCM7	nc|ENSG00000166508|P33993-3|MCM7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1998168826103	3	475.605137	1423.79358	2.2024	0.0010475	-1.6253	-0.00077301	0.57708	0.00027446	475.6042591853433	41.097	0.35254	41.097	40.986	41.338	0					15	10	2	0	0	0	0.14606	1	17200	17200		0.36667	0	1	832150			19755	3908	9539	9578	22814	22814					0.09863799679919794
LLWMPLLL	8	Unmodified	_LLWMPLLL_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3134948611259	2	499.808999	997.603446	1.9938	0.00099653	-1.7349	-0.00086711	0.25895	0.00012943	499.8055759404122	69.24	1.1906	69.562	69.22	70.411	0.32224					68	37	3	0	0	0	0.67839	2	28944	28944;28996		32.454	8.2437	1	1780200			19756	4083	9540	9579	22815;22816	22815					0.10454841484011013
LLWMPLLL	8	Unmodified	_LLWMPLLL_					0	0	0		ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	ENSG00000169340|ENST00000302451|PDILT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8068420290947	2	499.808999	997.603446	2.074	0.0010366	-1.1478	-0.00057366	0.92623	0.00046294	499.8060394380349	67.934	1.5612	69.312	69.065	70.626	1.3778					88	50	3	0	0	0	0.67839	2	28555	28505;28555		32.454	8.2437	1	3820300			19757	4083	9540	9579	22817;22818	22818					0.10454841484011013
LLWQTRHI	8	Unmodified	_LLWQTRHI_					0	0	0		ENST00000595588.5_2_2:98290935-98319166:+|nuORF;ENST00000601509.5_2_2:98287946-98319166:+|nuORF	ENST00000595588.5_2_2:98290935-98319166:+|nuORF	ENST00000595588.5_2_2:98290935-98319166:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1924926638603	2	533.811451	1065.60835	2.5272	0.0013491	-2.258	-0.0012054	0.2692	0.0001437	534.3115461768014	75.76	0.18513	77.054	76.912	77.097	1.2938					6	5	2	0	0	0	2.3239	1	31767	31767		6.3541	0	1	369990			19758	7515	9541	9580	22819	22819					0.07816861670971775
LLWVTLLL	8	Unmodified	_LLWVTLLL_					0	0	0			REV__nc|ENSG00000100926|O15321-2|TM9SF1	REV__nc|ENSG00000100926|O15321-2|TM9SF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2172119021416	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.058	1	24.272	23.772	24.772	1.2145								0	0	0	1.0178	1	9637	9637		0.45834	0	1		+		19759	9015	9542	9581	22820	22820					0.14026183873147602
LLWWSGCS	8	Unmodified	_LLWWSGCS_					0	0	0			REV__nc|ENSG00000152270|Q13370-2|PDE3B	REV__nc|ENSG00000152270|Q13370-2|PDE3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	476.2238342165947	2	476.223288	950.432024	2.2922	0.0010916	-2.6281	-0.0012516	-0.33596	-0.00015999	476.2219768545652	56.709	0.3508	56.709	56.488	56.839	0					23	11	3	0	0	0	0.87803	1	23618	23618		10.183	3.9776	1	14497000	+		19760	10419	9543	9582	22821	22821					-0.045175155544598056
LLYCWEMF	8	Unmodified	_LLYCWEMF_					0	0	0		ENST00000578529.5_1_18:259269-260310:-|nuORF;ENST00000581116.1_1_18:259269-264031:-|nuORF	ENST00000578529.5_1_18:259269-260310:-|nuORF	ENST00000578529.5_1_18:259269-260310:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	553.2914306521416	2	552.748282	1103.48201	2.7843	0.001539	1.4791	0.00081754	4.2633	0.0023566	552.748101738744	65.318	0.27815	66.717	66.571	66.849	1.3989					12	8	2	0	0	0	2.3239	1	27427	27427		15.768	7.8581	1	522630			19761	7422	9544	9583	22822	22822					-0.06559148940846171
LLYCWEMF	8	Unmodified	_LLYCWEMF_					0	0	0		ENST00000578529.5_1_18:259269-260310:-|nuORF;ENST00000581116.1_1_18:259269-264031:-|nuORF	ENST00000578529.5_1_18:259269-260310:-|nuORF	ENST00000578529.5_1_18:259269-260310:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.748282	1103.48201	1.7647	0.00097545	2.7343	0.0015114	4.499	0.0024868	552.7497078384898	64.892	0.31052	66.8	66.658	66.969	1.9085	0.041724	0.00055598	NaN	15.768	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	433620			19762	7422	9544	9583							-0.06559148940846171
LLYDLADQLHA	11	Unmodified	_LLYDLADQLHA_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;ENST00000559075.5_1_15:76523658-76603729:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	636.3377563357353	2	636.335153	1270.65575	2.4772	0.0015763	0.62035	0.00039475	3.0976	0.0019711	636.3356974788024	62.145	0.28099	62.145	61.993	62.274	0					20	8	3	0	0	0	0.10312	2	25924	25876;25924		55.235	35.873	1	1238600			19763	2912	9545	9584	22823;22824	22824					0.031250513606664754
LLYDLADQLHA	11	Unmodified	_LLYDLADQLHA_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;ENST00000559075.5_1_15:76523658-76603729:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	636.3372680544853	2	636.335153	1270.65575	1.9058	0.0012127	0.70841	0.00045078	2.6142	0.0016635	636.3356333862987	61.657	0.34032	61.986	61.825	62.165	0.32974					25	10	3	0	0	0	0.038423	2	25846	25796;25846		71.708	44.079	1	1150500			19764	2912	9545	9584	22825;22826	22826					0.031250513606664754
LLYDLADQLHA	11	Unmodified	_LLYDLADQLHA_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;ENST00000559075.5_1_15:76523658-76603729:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.3366577029228	2	636.335153	1270.65575	2.7933	0.0017775	0.26826	0.00017071	3.0616	0.0019482	636.3353554595828	60.585	0.37333	62.004	61.779	62.153	1.4196					31	11	4	0	0	0	0.0087106	2	25415	25373;25415		107.1	57.167	1	4014800			19765	2912	9545	9584	22827;22828	22828					0.031250513606664754
LLYDLADQLHA	11	Unmodified	_LLYDLADQLHA_					0	0	0		nc|ENSG00000140374|P13804-2|ETFA;ENSG00000140374|ENST00000557943|ETFA;ENST00000559758.5_1_15:76566725-76584849:-|nuORF;ENST00000559075.5_1_15:76523658-76603729:-|nuORF	nc|ENSG00000140374|P13804-2|ETFA	nc|ENSG00000140374|P13804-2|ETFA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3374511599541	2	636.335153	1270.65575	2.709	0.0017239	0.7349	0.00046765	3.4439	0.0021915	636.3357412769438	60.06	0.31518	62.026	61.883	62.199	1.9653					24	9	3	0	0	0	0.029255	2	25198	25198;25253		80.676	44.17	1	4470200			19766	2912	9545	9584	22829;22830	22829					0.031250513606664754
LLYDTVQTL	9	Unmodified	_LLYDTVQTL_					0	0	0			REV__INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	REV__INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2997924685478	2	533.294965	1064.57538	2.4593	0.0013115	1.159	0.00061808	3.6183	0.0019296	533.2957375719584	72.089	1.1135	73.43	73.279	74.393	1.3415					48	35	3	0	0	0	0.22519	1	30257	30257		30.225	7.0764	1	1992800	+		19767	8570	9546	9585	22831	22831					0.04567190037619184
LLYEDALYTV	10	Unmodified	_LLYEDALYTV_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D;UNC13D|p.W260Cfs*68|1|0.11|ENSG00000092929|chr17:75840303-75840303|C/-|frameshift_variant;nc|ENSG00000092929|Q70J99-2|UNC13D;ENST00000591563.5_1_17:73836050-73840487:-|nuORF;ENST00000585574.5_1_17:73837076-73839803:-|nuORF;ENST00000587504.5_1_17:73835995-73839803:-|nuORF	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3171264529228	2	600.313354	1198.61216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.552	1	71.552	71.052	72.052	0								0	0	0	0.45714	1	29798	29798		26.884	6.43	1				19768	1168	9547	9586	22832	22832					0.020794418634977774
LLYEDALYTV	10	Unmodified	_LLYEDALYTV_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D;UNC13D|p.W260Cfs*68|1|0.11|ENSG00000092929|chr17:75840303-75840303|C/-|frameshift_variant;nc|ENSG00000092929|Q70J99-2|UNC13D;ENST00000591563.5_1_17:73836050-73840487:-|nuORF;ENST00000585574.5_1_17:73837076-73839803:-|nuORF;ENST00000587504.5_1_17:73835995-73839803:-|nuORF	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	600.8189575076103	2	600.313354	1198.61216	1.4026	0.00084197	3.8841	0.0023317	5.2867	0.0031736	600.8180689891401	71.043	0.25526	71.367	71.271	71.527	0.32359					11	7	2	0	0	0	0.75645	1	29753	29753		15.847	1.0089	1	297670			19769	1168	9547	9586	22833	22833					0.020794418634977774
LLYFVFLI	8	Unmodified	_LLYFVFLI_					0	0	0		nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1	nc|ENSG00000074621|O60721-3|SLC24A1	nc|ENSG00000074621|O60721-3|SLC24A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2132140994072	3	343.212407	1026.61539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.09	1	101.16	100.66	101.66	0.067009								0	0	0	1.0178	1	42322	42322		1.8442	0	1				19770	916	9548	9587	22834	22834					0.1031478149884606
LLYGLINQI	9	Unmodified	_LLYGLINQI_					0	0	0			REV__tr|A0A7D6W3D0|A0A7D6W3D0_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09355PE=4SV=1	REV__tr|A0A7D6W3D0|A0A7D6W3D0_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09355PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8179809451103	2	523.815867	1045.61718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.321	1	92.303	91.803	92.803	0.98157								0	0	0	0.35192	1	38463	38463		13.508	0	1		+		19771	15613	9549	9588	22835	22835					0.0961979051680828
LLYGLINQI	9	Unmodified	_LLYGLINQI_					0	0	0			REV__tr|A0A7D6W3D0|A0A7D6W3D0_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09355PE=4SV=1	REV__tr|A0A7D6W3D0|A0A7D6W3D0_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_09355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8182861208916	2	523.815867	1045.61718	3.6637	0.0019191	1.0931	0.00057257	4.7568	0.0024917	523.8160302902945	90.873	0.34813	92.239	91.994	92.342	1.366					16	10	2	0	0	0	0.54523	1	38239	38239		13.508	0	1	787280	+		19772	15613	9549	9588	22836	22836					0.0961979051680828
LLYGLMIII	9	Unmodified	_LLYGLMIII_					0	0	0		tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8297607302666	2	524.827389	1047.64023	2.7901	0.0014643	0.24122	0.0001266	3.0313	0.0015909	524.8275843120056	82.998	0.68253	84.211	83.889	84.572	1.2125					76	21	5	0	0	0	0.82604	1	34751	34751		2.3027	0	1	80288000			19773	16857	9550	9589	22837	22837					0.11831093309933749
LLYGVPVSL	9	Unmodified	_LLYGVPVSL_					0	0	0		ENST00000468718.5_1_1:46860020-46871294:+|nuORF;FAAH|p.S217Vfs*6|1|0.07|ENSG00000117480|chr1:46405656-46405657|-/TGTA|frameshift_variant;ENST00000493735.5_1_1:46860047-46871467:+|nuORF;FAAH|p.G528Yfs*46|1|0.25|ENSG00000117480|chr1:46413191-46413195|GGGGA/-|frameshift_variant;ENSG00000117480|ENST00000243167|FAAH	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	960.5758544802666	1	960.576445	959.569169	1.7844	0.0017141	-1.1647	-0.0011188	0.6197	0.00059527	960.5754084157899	78.403	0.25285	78.713	78.548	78.801	0.30933					12	7	2	0	0	0	0.3154	1	32792	32792		24.674	5.2349	1	465110			19774	2011	9551	9590	22838	22838					0.087767165967648
LLYGVPVSL	9	Unmodified	_LLYGVPVSL_					0	0	0		ENST00000468718.5_1_1:46860020-46871294:+|nuORF;FAAH|p.S217Vfs*6|1|0.07|ENSG00000117480|chr1:46405656-46405657|-/TGTA|frameshift_variant;ENST00000493735.5_1_1:46860047-46871467:+|nuORF;FAAH|p.G528Yfs*46|1|0.25|ENSG00000117480|chr1:46413191-46413195|GGGGA/-|frameshift_variant;ENSG00000117480|ENST00000243167|FAAH	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	960.5798217654228	1	960.576445	959.569169	1.8521	0.0017791	0.80089	0.00076931	2.653	0.0025484	960.5777725912039	77.399	0.25304	78.68	78.507	78.76	1.2809					12	7	2	0	0	0	0.061246	1	32468	32468		63.563	25.412	1	1518100			19775	2011	9551	9590	22839	22839					0.087767165967648
LLYGVPVSL	9	Unmodified	_LLYGVPVSL_					0	0	0		ENST00000468718.5_1_1:46860020-46871294:+|nuORF;FAAH|p.S217Vfs*6|1|0.07|ENSG00000117480|chr1:46405656-46405657|-/TGTA|frameshift_variant;ENST00000493735.5_1_1:46860047-46871467:+|nuORF;FAAH|p.G528Yfs*46|1|0.25|ENSG00000117480|chr1:46413191-46413195|GGGGA/-|frameshift_variant;ENSG00000117480|ENST00000243167|FAAH	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	ENST00000468718.5_1_1:46860020-46871294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	960.5811035037041	1	960.576445	959.569169	1.9935	0.0019149	0.43795	0.00042069	2.4314	0.0023356	960.5762975303476	76.893	0.31983	78.66	78.482	78.801	1.7672					19	9	3	0	0	0	0.087207	2	32235	32235;32284		53.576	15.424	1	1194100			19776	2011	9551	9590	22840;22841	22840					0.087767165967648
LLYHVTLI	8	Unmodified	_LLYHVTLI_					0	0	0			REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3001891970634	2	486.299853	970.585153	2.5816	0.0012554	-3.0301	-0.0014735	-0.44848	-0.00021809	486.2988647336794	73.098	0.28626	74.908	74.734	75.02	1.8101					14	8	2	0	0	0	0.80415	1	30662	30662		20.871	1.4322	1	890730	+		19777	8945	9552	9591	22842	22842					0.09868422833676505
LLYHVTLI	8	Unmodified	_LLYHVTLI_					0	0	0			REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	486.299853	970.585153	3.5878	0.0017447	-6.9481	-0.0033789	-3.3604	-0.0016342	486.2980685523951	73.655	0.34615	74.973	74.748	75.094	1.318	0.032455	-0.0030837	NaN	20.871	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	769310	+		19778	8945	9552	9591							0.09868422833676505
LLYHVTLI	8	Unmodified	_LLYHVTLI_					0	0	0			REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	REV__ENST00000214893.9_1_9:5823966-5832826:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	486.299853	970.585153	2.5816	0.0012554	-3.0301	-0.0014735	-0.44848	-0.00021809	486.2988647336794	73.098	0.28626	74.908	74.734	75.02	1.8101	-0.032455	0.00072699	NaN	20.871	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	890730	+		19779	8945	9552	9591							0.09868422833676505
LLYKLYII	8	Unmodified	_LLYKLYII_					0	0	0			REV__ENSG00000110900|ENST00000546076|TSPAN11	REV__ENSG00000110900|ENST00000546076|TSPAN11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1405517458916	2	519.833529	1037.6525	2.2688	0.0011794	-3.0026	-0.0015609	-0.7338	-0.00038146	519.8318580847056	59.35	0.31792	59.35	59.194	59.512	0					15	9	2	0	0	0	2.3239	1	24799	24799		0.79363	0	1	807920	+		19780	9309	9553	9592	22843	22843					0.13518453044594025
LLYKMGQTL	9	Unmodified	_LLYKMGQTL_					0	0	0		nc|ENSG00000070614|P52848-3|NDST1;ENSG00000070614|ENST00000261797|NDST1	nc|ENSG00000070614|P52848-3|NDST1	nc|ENSG00000070614|P52848-3|NDST1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.7366210818291	2	533.801903	1065.58925	1.816	0.00096941	-1.4984	-0.00079983	0.31767	0.00016957	533.8009220708776	58.805	0.18481	60.224	60.165	60.349	1.4186					6	5	2	0	0	0	0.10844	1	24636	24636		7.2892	0	1	459660			19781	857	9554	9593	22844	22844					0.05908144265072224
LLYLTYQII	9	Unmodified	_LLYLTYQII_					0	0	0			REV__tr|A0A7D6VRS8|A0A7D6VRS8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13310PE=4SV=1	REV__tr|A0A7D6VRS8|A0A7D6VRS8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3423950076103	2	570.339175	1138.6638	2.2215	0.001267	2.5027	0.0014274	4.7242	0.0026944	570.341478420195	84.922	0.36658	86.081	85.905	86.271	1.159					16	11	2	0	0	0	0.64949	1	35653	35653		9.3474	0	1	733240	+		19782	15424	9555	9594	22845	22845					0.10001230348098034
LLYQIVAA	8	Unmodified	_LLYQIVAA_					0	0	0			REV__ENSG00000071537|ENST00000336735|SEL1L	REV__ENSG00000071537|ENST00000336735|SEL1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1209899783134	2	445.770929	889.527304	1.4632	0.00065224	-0.91814	-0.00040928	0.54503	0.00024296	445.7699119834125	70.619	0.51797	72.457	72.104	72.622	1.8378					25	16	2	0	0	0	2.3239	1	29668	29668		2.8892	0	1	1344300	+		19783	8725	9556	9595	22846	22846					0.07812160908213173
LLYQVILIL	9	Unmodified	_LLYQVILIL_					0	0	0			REV__tr|A0A553SM88|A0A553SM88_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22045PE=4SV=1	REV__tr|A0A553SM88|A0A553SM88_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22045PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	543.7895385622978	2	544.359911	1086.70527	4.0582	0.0022091	0.11113	6.0492E-05	4.1693	0.0022696	544.360118942022	91.262	0.28206	92.243	92.071	92.353	0.98157					12	8	2	0	0	0	0.11898	1	38372	38372		2.3027	0	1	372880	+		19784	15011	9557	9596	22847	22847					0.16538411107444517
LLYRLGTF	8	Unmodified	_LLYRLGTF_					0	0	0			REV__ENST00000301781.10_1_11:62457841-62462085:-|nuORF	REV__ENST00000301781.10_1_11:62457841-62462085:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7935363650322	2	491.789653	981.564752	1.5304	0.00075262	3.1705	0.0015592	4.7009	0.0023119	491.7911754782824	79.037	0.48094	79.037	78.756	79.237	0					41	15	3	0	0	0	0.88504	1	32825	32825		5.7604	0	1	17292000	+		19785	8467	9558	9597	22848	22848					0.07323252173864603
LLYTCYQN	8	Unmodified	_LLYTCYQN_					0	0	0		nc|ENSG00000196208|Q4ZG55-2|GREB1;ENSG00000196208|ENST00000381486|GREB1	nc|ENSG00000196208|Q4ZG55-2|GREB1	nc|ENSG00000196208|Q4ZG55-2|GREB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	340.4955322146416	3	339.828516	1016.46372	1.2148	0.00041283	-1.573	-0.00053454	-0.35815	-0.00012171	339.82807450836265	71.148	0.35622	72.489	72.333	72.689	1.3415					17	11	2	0	0	0	2.3239	1	29856	29856		1.8442	0	1	1576700			19786	4921	9559	9598	22849	22849					-0.04385567591180006
LLYTQKSV	8	Unmodified	_LLYTQKSV_					0	0	0			REV__ENST00000458659.2_2_13:45147821-45148037:-|nuORF	REV__ENST00000458659.2_2_13:45147821-45148037:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1999694705009	2	476.279118	950.543683	2.2735	0.0010828	0.084646	4.0315E-05	2.3581	0.0011231	476.27888788820684	68.16	0.28014	69.538	69.394	69.675	1.3778					27	8	4	0	0	0	2.3239	1	28551	28551		2.5775	0	1	9098600	+		19787	13180	9560	9599	22850	22850					0.06643242074335376
LLYWLHRPLP	10	Unmodified	_LLYWLHRPLP_					0	0	0			REV__nc|ENSG00000122133|P09466-3|PAEP	REV__nc|ENSG00000122133|P09466-3|PAEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.3862182497978	2	654.384783	1306.75501	3.2265	0.0021114	-3.1447	-0.0020578	0.081846	5.3559E-05	654.3839525035594	107.31	0.11217	107.46	107.43	107.54	0.15795					13	5	3	0	0	0	0.89803	1	46075	46075		0.45834	0.057624	1	75847000	+		19788	9604	9561	9600	22851	22851					0.1139053883609904
LLYWLHRPLP	10	Unmodified	_LLYWLHRPLP_					0	0	0			REV__nc|ENSG00000122133|P09466-3|PAEP	REV__nc|ENSG00000122133|P09466-3|PAEP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	654.384783	1306.75501	1.4938	0.00097751	2.2667	0.0014833	3.7605	0.0024608	654.3861526650666	107.38	0.082581	107.38	107.35	107.43	0	-0.040583	0.0019623	NaN	0.45834	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4810300	+		19789	9604	9561	9600							0.1139053883609904
LLYWLHRPLP	10	Unmodified	_LLYWLHRPLP_					0	0	0			REV__nc|ENSG00000122133|P09466-3|PAEP	REV__nc|ENSG00000122133|P09466-3|PAEP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	654.384783	1306.75501	2.6683	0.0017461	0.66563	0.00043558	3.334	0.0021817	654.3845077437232	107.36	0.086143	107.41	107.37	107.46	0.052452	-0.0039496	-0.00013313	NaN	0.45834	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1866500	+		19790	9604	9561	9600							0.1139053883609904
LLYWLHRPLP	10	Unmodified	_LLYWLHRPLP_					0	0	0			REV__nc|ENSG00000122133|P09466-3|PAEP	REV__nc|ENSG00000122133|P09466-3|PAEP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	654.384783	1306.75501	3.2265	0.0021114	-3.1447	-0.0020578	0.081846	5.3559E-05	654.3839525035594	107.31	0.11217	107.46	107.43	107.54	0.15795	0.044532	-0.0051199	NaN	0.45834	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75847000	+		19791	9604	9561	9600							0.1139053883609904
LMAAGAGK	8	Unmodified	_LMAAGAGK_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.6993591189384	2	359.699449	717.384345	-0.75698	-0.00027229	0.70604	0.00025396	-0.050944	-1.8325E-05	359.6997617388196	17.25	0.29144	18.148	17.991	18.282	0.89794					27	9	3	0	0	0	0.74212	2	7197	7155;7197		26.341	0	1	3359300	+		19792	8532	9562	9601	22852;22853	22853					0.01434830245352714
LMAAGAGK	8	Unmodified	_LMAAGAGK_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.6995117068291	2	359.699449	717.384345	-0.099138	-3.566E-05	-0.81082	-0.00029165	-0.90996	-0.00032731	359.6991858973333	17.009	0.27041	18.311	18.142	18.413	1.3023					19	8	3	0	0	0	0.74212	2	7048	7048;7093		26.341	0	1	4649100	+		19793	8532	9562	9601	22854;22855	22854					0.01434830245352714
LMAAGAGK	8	Unmodified	_LMAAGAGK_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	359.699449	717.384345	-0.75698	-0.00027229	0.70604	0.00025396	-0.050944	-1.8325E-05	359.6997617388196	17.25	0.29144	18.148	17.991	18.282	0.89794	-0.081765	0.00052554	NaN	26.341	27	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3359300	+		19794	8532	9562	9601							0.01434830245352714
LMAAGAGK	8	Unmodified	_LMAAGAGK_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	359.699449	717.384345	-0.099138	-3.566E-05	-0.81082	-0.00029165	-0.90996	-0.00032731	359.6991858973333	17.009	0.27041	18.311	18.142	18.413	1.3023	0.081765	-0.00056569	NaN	26.341	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4649100	+		19795	8532	9562	9601							0.01434830245352714
LMAARQGQFL	10	Unmodified	_LMAARQGQFL_					0	0	0			REV__ENSG00000213341|ENST00000370397|CHUK	REV__ENSG00000213341|ENST00000370397|CHUK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8072387576103	2	567.808051	1133.60155	3.3075	0.001878	-0.68172	-0.00038708	2.6258	0.0014909	567.8091216083278	60.397	0.56788	62.362	61.947	62.514	1.9653					34	17	3	0	0	0	0.84024	1	25367	25367		7.9102	1.7044	1	2514100	+		19796	11836	9563	9602	22856	22856					0.04009180728121464
LMAKKWVKF	9	Unmodified	_LMAKKWVKF_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	575.2783691287041	2	575.843905	1149.67326	2.4021	0.0013833	-0.017989	-1.0359E-05	2.3841	0.0013729	575.842831853424	77.565	0.35162	78.846	78.663	79.015	1.2809					14	10	2	0	0	0	0.11787	1	32600	32600		2.3027	0	1	468210			19797	3240	9564	9603	22857	22857					0.10440720152632821
LMAKKWVKF	9	Unmodified	_LMAKKWVKF_					0	0	0		nc|ENSG00000149488|Q8TDI7-3|TMC2;ENSG00000149488|ENST00000358864|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	nc|ENSG00000149488|Q8TDI7-3|TMC2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	575.843905	1149.67326	1.6401	0.00094445	-0.022626	-1.3029E-05	1.6175	0.00093142	575.8436870999504	78.623	0.31541	78.623	78.409	78.724	0	-0.21473	-0.00044299	NaN	2.3027	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550700			19798	3240	9564	9603							0.10440720152632821
LMDCDWRWDP	10	Unmodified	_LMDCDWRWDP_					0	0	0		nc|ENSG00000168016|O15050|TRANK1;ENSG00000168016|ENST00000645898|TRANK1	nc|ENSG00000168016|O15050|TRANK1	nc|ENSG00000168016|O15050|TRANK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	446.8936645388603	3	446.186486	1335.53763	0.2002	8.9328E-05	-0.68786	-0.00030691	-0.48765	-0.00021758	446.18519342775056	11.139	0.36704	11.9	11.701	12.068	0.76165					14	11	2	0	0	0	0.12549	1	4694	4694		1.7423	0	1	409850			19799	4008	9565	9604	22858	22858					-0.11671967491156465
LMEDCWNP	8	Unmodified	_LMEDCWNP_					0	0	0		MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant;ENSG00000006432|ENST00000554752|MAP3K9;nc|ENSG00000006432|P80192-4|MAP3K9	MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant	MAP3K9|p.Q696Sfs*20|1|0.12|ENSG00000006432|chr14:70733283-70733284|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2050353884697	2	504.201696	1006.38884	3.6903	0.0018606	2.8174	0.0014205	6.5077	0.0032812	504.2035808579229	72.976	0.50072	74.306	74.069	74.569	1.3298					47	15	5	0	0	0	0.83505	1	30606	30606		23.148	7.3012	1	7644600			19800	506	9566	9605	22859	22859					-0.11410073394051778
LMEDTGWYK	9	Unmodified	_LMEDTGWYK_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5105773806572	3	381.511075	1141.5114	-0.21251	-8.1076E-05	-0.65389	-0.00024947	-0.86641	-0.00033054	381.5109626703383	1.2417	1.2917	1.9901	1.6526	2.9443	0.7484					120	78	3	0	0	0	0.81521	1	755	755		2.7352	0	1	689450			19801	4752	9567	9606	22860	22860					-0.053699133909731245
LMEDTGWYK	9	Unmodified	_LMEDTGWYK_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5109130740166	3	381.511075	1141.5114	-0.21275	-8.1165E-05	-0.90704	-0.00034604	-1.1198	-0.00042721	381.5110510199505	3.3756	0.63194	4.1209	3.6303	4.2622	0.74525					63	38	2	0	0	0	0.81521	2	1271	1271;1361		2.7352	0	1	423210			19802	4752	9567	9606	22861;22862	22861					-0.053699133909731245
LMEDTGWYK	9	Unmodified	_LMEDTGWYK_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5112792849541	3	381.511075	1141.5114	-0.2128	-8.1185E-05	-1.7272	-0.00065894	-1.94	-0.00074013	381.51058175369275	4.5394	0.31051	5.2758	5.0139	5.3245	0.73642					36	22	2	0	0	0	0.81521	1	1824	1824		2.7352	0	1	375990			19803	4752	9567	9606	22863	22863					-0.053699133909731245
LMEDTGWYK	9	Unmodified	_LMEDTGWYK_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5110046267509	3	381.511075	1141.5114	-0.213	-8.1262E-05	-0.97372	-0.00037149	-1.1867	-0.00045275	381.5109717963092	6.1625	0.93596	6.8932	6.5781	7.514	0.73074					90	66	2	0	0	0	0.81521	2	2609	2609;2651		2.7352	0	1	568910			19804	4752	9567	9606	22864;22865	22864					-0.053699133909731245
LMEDTGWYK	9	Unmodified	_LMEDTGWYK_					0	0	0		nc|ENSG00000185621|Q96KR4-2|LMLN;ENSG00000185621|ENST00000420910|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	nc|ENSG00000185621|Q96KR4-2|LMLN	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5109435915947	3	381.511075	1141.5114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5511	1	4.2964	3.7964	4.7964	0.74525								0	0	0	0.42693	1	1473	1473		2.7352	0	1				19805	4752	9567	9606	22866	22866					-0.053699133909731245
LMEHFFYQWK	10	Unmodified	_LMEHFFYQWK_					0	0	0			REV__tr|A0A553SL46|A0A553SL46_NIACIAdaptorproteinOS=NialliacirculansOX=1397GN=CEQ21_19950PE=3SV=1	REV__tr|A0A553SL46|A0A553SL46_NIACIAdaptorproteinOS=NialliacirculansOX=1397GN=CEQ21_19950PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1989318728447	3	476.897152	1427.66963	0.063723	3.0389E-05	1.8547	0.00088451	1.9184	0.00091489	476.89817651918787	13.479	0.24751	14.205	14.07	14.317	0.72639					14	7	3	0	0	0	0.12557	1	5626	5626		1.7423	0	1	734760	+		19806	14975	9568	9607	22867	22867					-0.027099944119299835
LMERYDTK	8	Unmodified	_LMERYDTK_					0	0	0			REV__ENST00000430298.6_1_19:12224253-12224301:+|nuORF	REV__ENST00000430298.6_1_19:12224253-12224301:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	352.3404113650322	3	352.511187	1054.51173	-2.358	-0.00083121	2.7057	0.00095378	0.3477	0.00012257	352.5120738033218	13.285	0.37059	13.285	13.146	13.517	0					18	11	2	0	0	0	0.88504	1	5482	5482		3.9444	0.3479	1	361060	+		19807	13021	9569	9608	22868	22868					-0.01334493671151904
LMERYDTK	8	Unmodified	_LMERYDTK_					0	0	0			REV__ENST00000430298.6_1_19:12224253-12224301:+|nuORF	REV__ENST00000430298.6_1_19:12224253-12224301:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	352.3404113650322	3	352.511187	1054.51173	-2.358	-0.00083121	2.7057	0.00095378	0.3477	0.00012257	352.5120738033218	13.285	0.37059	13.285	13.146	13.517	0					18	11	2	0	0	0	2.3239	1	5482	5482		3.9444	0.3479	1	361060	+		19808	13021	9569	9608	22869	22869					-0.01334493671151904
LMESITHAVF	10	Unmodified	_LMESITHAVF_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.2984496951103	2	574.294442	1146.57433	2.2077	0.0012679	0.80799	0.00046402	3.0157	0.0017319	574.295466382015	69.476	0.44304	71.329	71.072	71.515	1.853					31	13	3	0	0	0	0.65574	1	29153	29153		20.454	1.1966	1	1346300			19809	1545	9570	9609	22870	22870					0.00690652397042868
LMEVMPKICRL	11	Unmodified	_LMEVMPKICRL_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	666.8614990115166	2	666.863654	1331.71276	2.5457	0.0016976	-2.74	-0.0018272	-0.19425	-0.00012954	666.8615372172756	65.383	0.4624	66.782	66.632	67.094	1.3989					35	14	3	0	0	0	0.31168	1	27453	27453		31.268	0.6318	1	1506700			19810	5452	9571	9610	22871	22871					0.06016736049514293
LMEVMPKICRL	11	Unmodified	_LMEVMPKICRL_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1;nc|ENSG00000273749|Q7L576-2|CYFIP1;nc|ENSG00000273749|Q7L576-3|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	666.863654	1331.71276	1.5966	0.0010647	-0.79757	-0.00053187	0.79899	0.00053281	666.8649874076483	65.125	0.21912	67.033	66.938	67.157	1.9085	0.12543	0.0020689	NaN	31.268	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603740			19811	5452	9571	9610							0.06016736049514293
LMFCQEDW	8	Unmodified	_LMFCQEDW_					0	0	0			REV__ENST00000412676.5_1_12:108685470-108685611:-|nuORF	REV__ENST00000412676.5_1_12:108685470-108685611:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2183105349541	2	536.217346	1070.42014	2.878	0.0015432	-2.0807	-0.0011157	0.79727	0.00042751	536.2166254569997	72.335	0.37206	74.145	73.981	74.353	1.8101					29	11	4	0	0	0	0.89008	1	30389	30389		2.5775	0	1	1964200	+		19812	12924	9572	9611	22872	22872					-0.11225500359955731
LMFGSPLLA	9	Unmodified	_LMFGSPLLA_					0	0	0		tr|A0A553ST11|A0A553ST11_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03900PE=3SV=1	tr|A0A553ST11|A0A553ST11_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03900PE=3SV=1	tr|A0A553ST11|A0A553ST11_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03900PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.5331298708916	1	948.522301	947.515025	2.5347	0.0024043	1.9558	0.0018551	4.4906	0.0042594	948.5248196512671	84.448	0.54577	84.709	84.437	84.983	0.26083					28	16	2	0	0	0	0.15478	1	35278	35278		38.151	0	1	876750			19813	16631	9573	9612	22873	22873					0.03916801173534168
LMFPTIFL	8	Unmodified	_LMFPTIFL_					0	0	0			REV__tr|A0A553SL50|A0A553SL50_NIACIProteasePrsWOS=NialliacirculansOX=1397GN=CEQ21_19965PE=3SV=1	REV__tr|A0A553SL50|A0A553SL50_NIACIProteasePrsWOS=NialliacirculansOX=1397GN=CEQ21_19965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2793762087822	2	491.277532	980.540511	0.86106	0.00042302	3.9126	0.0019222	4.7737	0.0023452	491.2795026760292	51.66	0.31326	53.632	53.426	53.739	1.9722					14	9	2	0	0	0	0.72134	1	21629	21629		28.173	1.832	1	1157600	+		19814	14977	9574	9613	22874	22874					0.049462756959542276
LMFPVLCA	8	Unmodified	_LMFPVLCA_					0	0	0			REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	REV__ENST00000527932.1_1_1:46080644-46081380:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	447.7662841677666	2	447.23481	892.455067	2.813	0.0012581	0.7825	0.00034996	3.5955	0.0016081	447.2351241756343	71.975	0.42323	73.799	73.601	74.024	1.824					30	13	3	0	0	0	2.3239	1	30254	30254		2.8892	2.1988	1	3676300	+		19815	13680	9575	9614	22875	22875					0.004537872386435993
LMGHMLYLL	9	Unmodified	_LMGHMLYLL_					0	0	0		HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant;nc|ENSG00000112339|Q9Y450-4|HBS1L;ENSG00000112339|ENST00000367837|HBS1L	HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant	HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.7461425662041	2	545.793023	1089.57149	2.4347	0.0013288	-2.6907	-0.0014686	-0.25606	-0.00013976	545.7915789906872	64.29	0.21716	66.218	66.077	66.294	1.928					9	6	2	0	0	0	0.11109	1	26943	26943		14.582	1.0738	1	744990			19816	1780	9576	9615	22876	22876					0.03029105738551152
LMIKFFRIK	9	Unmodified	_LMIKFFRIK_					0	0	0			REV__ENSG00000101850|ENST00000467482|GPR143	REV__ENSG00000101850|ENST00000467482|GPR143	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2510253787041	3	399.250979	1194.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.85	1	113.85	113.35	114.35	0								0	0	0	0.42693	1	49172	49172		0.26902	0	1		+		19817	9046	9577	9616	22877	22877					0.14152982078030618
LMIKFFRIK	9	Unmodified	_LMIKFFRIK_					0	0	0			REV__ENSG00000101850|ENST00000467482|GPR143	REV__ENSG00000101850|ENST00000467482|GPR143	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2511474490166	3	399.250979	1194.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.51	1	114.51	114.01	115.01	0								0	0	0	0.42693	1	49439	49439		0.26902	0	1		+		19818	9046	9577	9616	22878	22878					0.14152982078030618
LMIKFFRIK	9	Unmodified	_LMIKFFRIK_					0	0	0			REV__ENSG00000101850|ENST00000467482|GPR143	REV__ENSG00000101850|ENST00000467482|GPR143	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2507507205009	3	399.250979	1194.73111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.6	1	115.6	115.1	116.1	0								0	0	0	0.42693	1	49882	49882		0.26902	0	1		+		19819	9046	9577	9616	22879	22879					0.14152982078030618
LMKGIAIA	8	Unmodified	_LMKGIAIA_					0	0	0		tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.7539855837822	2	408.754224	815.493896	2.9222	0.0011945	-1.8673	-0.00076326	1.0549	0.0004312	408.75303285095356	101.04	0.12484	101.11	101.03	101.15	0.067009					9	3	3	0	0	0	0.89178	1	42312	42312		0.69038	0	1	1804000			19820	16430	9578	9617	22880	22880					0.0787683586465846
LMKGIAIA	8	Unmodified	_LMKGIAIA_					0	0	0		tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	408.754224	815.493896	-0.060702	-2.4812E-05	-1.3551	-0.0005539	-1.4158	-0.00057872	408.7531433839444	101.08	0.12277	101.08	101	101.12	0	-0.005873	-0.00099396	NaN	0.69038	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1651000			19821	16430	9578	9617							0.0787683586465846
LMKGIAIA	8	Unmodified	_LMKGIAIA_					0	0	0		tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	tr|A0A553SNP8|A0A553SNP8_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24770PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	408.754224	815.493896	3.164	0.0012933	1.4748	0.00060281	4.6387	0.0018961	408.7546755896786	100.86	0.1135	101.06	101.01	101.12	0.20527	-0.020895	0.0013195	NaN	0.69038	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259300			19822	16430	9578	9617							0.0787683586465846
LMKLVEQP	8	Unmodified	_LMKLVEQP_					0	0	0			REV__nc|ENSG00000183323|Q86Z20-2|CCDC125	REV__nc|ENSG00000183323|Q86Z20-2|CCDC125	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2779113650322	2	479.275521	956.536489	2.2122	0.0010603	2.6073	0.0012496	4.8196	0.0023099	479.27669627777755	64.483	1.0819	64.483	63.832	64.914	0					60	33	2	0	0	0	0.89008	1	26978	26978		2.5775	0	1	1074600	+		19823	11388	9579	9618	22881	22881					0.05648186202245142
LMKLVRIPLRN	11	Unmodified	_LMKLVRIPLRN_					0	0	0			REV__ENSG00000183779|ENST00000331569|ZNF703	REV__ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	339.4712402224541	4	338.969425	1351.8486	0.77786	0.00026367	0.86944	0.00029471	1.6473	0.00055838	339.22001085112146	32.88	0.90034	33.174	32.621	33.521	0.29431					79	30	4	0	0	0	1.0365	1	13803	13803		1.2148	0.76031	1	4237600	+		19824	11403	9580	9619	22882	22882					0.18674514946837917
LMKLVRIPLRN	11	Unmodified	_LMKLVRIPLRN_					0	0	0			REV__ENSG00000183779|ENST00000331569|ZNF703	REV__ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	339.2205078005791	4	338.969425	1351.8486	0.91398	0.00030981	0.43188	0.0001464	1.3459	0.00045621	338.9695956886682	35.384	0.18373	35.684	35.6	35.784	0.29942					19	14	2	0	0	0	1.0365	1	14867	14867		1.2148	0.70888	1	2654200	+		19825	11403	9580	9619	22883	22883					0.18674514946837917
LMKLVRIPLRN	11	Unmodified	_LMKLVRIPLRN_					0	0	0			REV__ENSG00000183779|ENST00000331569|ZNF703	REV__ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	339.2214233279228	4	338.969425	1351.8486	-0.58807	-0.00019934	2.4078	0.00081617	1.8197	0.00061683	338.97054425648236	31.706	0.77863	32.987	32.501	33.28	1.2813					71	25	5	0	0	0	1.0224	1	13163	13163		2.4348	1.9288	1	7235700	+		19826	11403	9580	9619	22884	22884					0.18674514946837917
LMKLVRIPLRN	11	Unmodified	_LMKLVRIPLRN_					0	0	0			REV__ENSG00000183779|ENST00000331569|ZNF703	REV__ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.9704162478447	4	338.969425	1351.8486	0.34872	0.00011821	0.78444	0.0002659	1.1332	0.00038411	338.97023840668885	31.132	0.86855	32.957	32.461	33.33	1.8246					94	29	5	0	0	0	1.0224	2	13053	13053;13098		2.4348	1.22	1	4520700	+		19827	11403	9580	9619	22885;22886	22885					0.18674514946837917
LMKSAKLVH	9	Unmodified	_LMKSAKLVH_					0	0	0			REV__ENSG00000078114|ENST00000377122|NEBL	REV__ENSG00000078114|ENST00000377122|NEBL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8749877810478	3	342.8758	1025.60557	-1.6052	-0.00055039	-0.14007	-4.8027E-05	-1.7453	-0.00059842	342.87564392034113	37.206	1.0173	37.206	36.643	37.66	0					116	47	3	0	0	0	0.78661	1	15391	15391		3.8763	1.3778	1	16067000	+		19828	8787	9581	9620	22887	22887					0.09379270221802471
LMKVKRVFF	9	Unmodified	_LMKVKRVFF_					0	0	0			REV__ENST00000449832.1_1_2:160545868-160546547:-|nuORF	REV__ENST00000449832.1_1_2:160545868-160546547:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3580200076103	2	584.357179	1166.69981	3.3962	0.0019846	-1.9024	-0.0011117	1.4938	0.00087289	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.82604	1	31037	31037		2.3027	2.3027	1	5910500	+		19829	13124	9582	9621	22888	22888					0.12312409043966
LMKWEKQYLRR	11	Unmodified	_LMKWEKQYLRR_					0	0	0			REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6303588747978	3	517.625656	1549.85514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.84	1	112.88	112.38	113.38	0.044189								0	0	0	0.63775	1	48618	48618		2.4348	1.1051	1		+		19830	13695	9583	9622	22889	22889					0.10220408107556977
LMKWEKQYLRR	11	Unmodified	_LMKWEKQYLRR_					0	0	0			REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6266357302666	3	517.625656	1549.85514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.76	1	113.81	113.31	114.31	0.044189								0	0	0	0.63775	1	48990	48990		0.094841	0	1		+		19831	13695	9583	9622	22890	22890					0.10220408107556977
LMKWEKQYLRR	11	Unmodified	_LMKWEKQYLRR_					0	0	0			REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	REV__ENST00000532168.2_1_11:112151431-112162265:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.2971069216728	3	517.625656	1549.85514	3.389	0.0017542	-1.7784	-0.00092054	1.6106	0.00083367	517.6248369628745	113.47	7.1813	113.62	112.96	120.15	0.14912					338	222	2	0	0	0	0.14606	1	48892	48892		1.1098	0	1	10651000	+		19832	13695	9583	9622	22891	22891					0.10220408107556977
LMLEEIKL	8	Unmodified	_LMLEEIKL_					0	0	0			REV__tr|A0A553SGK6|A0A553SGK6_NIACIPhosphateABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11015PE=4SV=1	REV__tr|A0A553SGK6|A0A553SGK6_NIACIPhosphateABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_11015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7941161990166	2	494.791004	987.567454	1.5827	0.00078311	0.98668	0.0004882	2.5694	0.0012713	494.7901691261318	46.439	0.64344	48.409	47.943	48.587	1.9703					38	20	3	0	0	0	0.69649	2	19429	19429;19478		30.637	3.7529	1	1317200	+		19833	14755	9584	9623	22892;22893	22892					0.0731733951647584
LMLELPLVI	9	Unmodified	_LMLELPLVI_					0	0	0		ENSG00000140450|ENST00000268042|ARRDC4	ENSG00000140450|ENST00000268042|ARRDC4	ENSG00000140450|ENST00000268042|ARRDC4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.2858154177666	2	520.824846	1039.63514	1.783	0.00092863	-0.46151	-0.00024037	1.3215	0.00068826	520.8253159900732	46.527	0.36409	48.497	48.347	48.711	1.9703					21	11	2	0	0	0	0.08828	1	19525	19525		28.487	11.545	1	1217900			19834	2917	9585	9624	22894	22894					0.11690789447311545
LMLKPKSPRK	10	Unmodified	_LMLKPKSPRK_					0	0	0			REV__KCNE2|p.T21Wfs*33|1|0.07|ENSG00000159197|chr21:34370534-34370540|TTATTAC/-|frameshift_variant	REV__KCNE2|p.T21Wfs*33|1|0.07|ENSG00000159197|chr21:34370534-34370540|TTATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3822509646416	2	599.378643	1196.74273	4.6782	0.002804	1.3661	0.00081883	6.0443	0.0036229	599.3794515251226	89.378	0.59403	90.782	90.456	91.05	1.4045					60	18	4	0	0	0	0.89646	1	37607	37607		1.8442	0	1	13994000	+		19835	14239	9586	9625	22895	22895					0.15223179101371898
LMLLEDAW	8	Unmodified	_LMLLEDAW_					0	0	0		ENSG00000112333|ENST00000368986|NR2E1;nc|ENSG00000112333|Q9Y466-2|NR2E1	ENSG00000112333|ENST00000368986|NR2E1	ENSG00000112333|ENST00000368986|NR2E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.4984619021416	1	990.496481	989.489204	2.6714	0.002646	-1.8542	-0.0018366	0.81717	0.0008094	990.4967594481467	78.851	0.15411	80.586	80.506	80.66	1.735					9	4	3	0	0	0	0.66111	1	33094	33094		34.187	5.1058	1	842590			19836	1779	9587	9626	22896	22896					-0.005960930687479049
LMLLEDAW	8	Unmodified	_LMLLEDAW_					0	0	0		ENSG00000112333|ENST00000368986|NR2E1;nc|ENSG00000112333|Q9Y466-2|NR2E1	ENSG00000112333|ENST00000368986|NR2E1	ENSG00000112333|ENST00000368986|NR2E1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	990.496481	989.489204	4.2611	0.0042206	-6.6903	-0.0066267	-2.4291	-0.0024061	990.4942322139458	79.31	0.28287	80.577	80.471	80.754	1.2668	-0.0047218	-0.0035154	NaN	34.187	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1018300			19837	1779	9587	9626							-0.005960930687479049
LMLLSLGLKL	10	Unmodified	_LMLLSLGLKL_					0	0	0			REV__ENSG00000138111|ENST00000238936|MFSD13A	REV__ENSG00000138111|ENST00000238936|MFSD13A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2813598513603	2	550.859221	1099.70389	2.4707	0.001361	-4.2239	-0.0023268	-1.7532	-0.00096576	550.8566150664457	59.146	0.28508	61.115	60.908	61.193	1.969					13	8	2	0	0	0	0.12484	1	24783	24783		7.2892	0.56607	1	713570	+		19838	10044	9588	9627	22897	22897					0.1580245374700553
LMLLTIHLH	9	Unmodified	_LMLLTIHLH_					0	0	0			REV__tr|A0A553SPR1|A0A553SPR1_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26905PE=4SV=1	REV__tr|A0A553SPR1|A0A553SPR1_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8265258669853	2	545.825712	1089.63687	3.0961	0.00169	0.33431	0.00018247	3.4304	0.0018724	545.8254611424942	100.4	0.13925	100.58	100.47	100.61	0.18047					14	5	4	0	0	0	0.41943	1	42244	42244		19.439	0	1	1616100	+		19839	15100	9589	9628	22898	22898					0.09563843255909887
LMLSVSAVYI	10	Unmodified	_LMLSVSAVYI_					0	0	0			REV__ENST00000590152.1_1_19:9267386-9267698:+|nuORF	REV__ENST00000590152.1_1_19:9267386-9267698:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3119994997978	2	548.309561	1094.60457	2.1882	0.0011998	-0.64329	-0.00035272	1.5449	0.00084707	548.3083657671574	59.213	1.0397	60.633	60.35	61.39	1.4196					64	33	2	0	0	0	0.38674	1	24901	24901		34.102	0	1	4100800	+		19840	14062	9590	9629	22899	22899					0.06105011062254562
LMLVKLSYL	9	Unmodified	_LMLVKLSYL_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3318969607353	2	540.330296	1078.64604	1.9151	0.0010348	1.4236	0.0007692	3.3386	0.001804	540.3310747216185	68.672	2.14	70.525	69.626	71.766	1.853					98	68	2	0	0	0	0.75267	1	28606	28606		5.2307	1.6342	1	2951700	+		19841	8253	9591	9630	22900	22900					0.1098619182157563
LMMMSGGQ	8	Unmodified	_LMMMSGGQ_					0	0	0		ENST00000431051.5_1_2:231951834-231951870:+|nuORF	ENST00000431051.5_1_2:231951834-231951870:+|nuORF	ENST00000431051.5_1_2:231951834-231951870:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	854.3578369021416	1	854.356892	853.349616	2.7838	0.0023784	0.2322	0.00019838	3.016	0.0025768	854.356605118767	98.723	0.22436	98.803	98.679	98.904	0.080376					21	7	4	0	0	0	0.88587	1	41269	41269		5.2307	2.6532	1	260850000			19842	6499	9592	9631	22901	22901					-0.08292496949252381
LMMTLKKTLI	10	Unmodified	_LMMTLKKTLI_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.8701660037041	2	596.363813	1190.71307	2.4816	0.0014799	3.7341	0.0022269	6.2157	0.0037068	596.3680173507425	87.011	0.33907	87.255	87.102	87.441	0.24387					44	13	4	0	0	0	0.89803	1	36440	36440		1.6526	0.17072	1	9073800			19843	3224	9593	9632	22902	22902					0.12534479041028135
LMMTLKKTLI	10	Unmodified	_LMMTLKKTLI_					0	0	0		ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.3683349490166	2	596.363813	1190.71307	3.0299	0.0018069	4.3335	0.0025844	7.3634	0.0043913	596.3675591213276	85.039	0.38665	86.636	86.46	86.847	1.5962					34	15	3	0	0	0	0.89803	1	35691	35691		1.6526	0.17072	1	5190000			19844	3224	9593	9632	22903	22903					0.12534479041028135
LMNLAGGAVVL	11	Unmodified	_LMNLAGGAVVL_					0	0	0		ENST00000459625.5_1_12:48179068-48183703:-|nuORF;nc|ENSG00000061273|Q8WUI4-9|HDAC7;nc|ENSG00000061273|Q8WUI4-2|HDAC7;nc|ENSG00000061273|Q8WUI4-10|HDAC7;nc|ENSG00000061273|Q8WUI4-3|HDAC7;nc|ENSG00000061273|Q8WUI4-4|HDAC7;nc|ENSG00000061273|Q8WUI4|HDAC7;nc|ENSG00000061273|Q8WUI4-7|HDAC7;nc|ENSG00000061273|Q8WUI4-6|HDAC7;ENSG00000061273|ENST00000080059|HDAC7;nc|ENSG00000061273|Q8WUI4-8|HDAC7	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	ENST00000459625.5_1_12:48179068-48183703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.3058349490166	2	529.307352	1056.60015	0.81425	0.00043099	-3.6223	-0.0019173	-2.8081	-0.0014863	529.3054632700628	50.597	0.30253	52.572	52.394	52.697	1.9753					15	9	2	0	0	0	0.31972	1	21162	21162		30.637	4.3684	1	2251500			19845	750	9594	9633	22904	22904					0.07411546639355038
LMPILNIIIAA	11	Unmodified	_LMPILNIIIAA_					0	0	0			REV__tr|A0A553SMJ8|A0A553SMJ8_NIACINADHdehydrogenasesubunit4OS=NialliacirculansOX=1397GN=CEQ21_22605PE=4SV=1	REV__tr|A0A553SMJ8|A0A553SMJ8_NIACINADHdehydrogenasesubunit4OS=NialliacirculansOX=1397GN=CEQ21_22605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	591.3723632693291	2	591.369952	1180.72535	2.193	0.0012969	2.785	0.001647	4.978	0.0029438	591.3717568353632	81.15	0.34116	81.15	80.947	81.288	0					23	10	3	0	0	0	0.58697	1	33789	33789		21.537	3.1639	1	996580	+		19846	15023	9595	9634	22905	22905					0.14221838775733886
LMPKYSSSL	9	Unmodified	_LMPKYSSSL_					0	0	0			REV__ENSG00000135912|ENST00000392102|TTLL4	REV__ENSG00000135912|ENST00000392102|TTLL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2699462771416	2	513.270435	1024.52632	2.9095	0.0014933	-3.1404	-0.0016119	-0.23097	-0.00011855	513.2690018268418	80.906	0.55833	82.602	82.394	82.953	1.6959					36	17	3	0	0	0	0.5697	1	33970	33970		12.532	0.89125	1	2857900	+		19847	9959	9596	9635	22906	22906					0.015035784770134342
LMPSHIVVRV	10	Unmodified	_LMPSHIVVRV_					0	0	0		ENST00000497057.1_1_1:201435542-201435581:-|nuORF	ENST00000497057.1_1_1:201435542-201435581:-|nuORF	ENST00000497057.1_1_1:201435542-201435581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8449584841728	2	575.841894	1149.66923	3.3483	0.0019281	1.3546	0.00078004	4.7029	0.0027081	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.87699	1	31113	31113		3.9444	0.3479	1	7218900			19848	6960	9597	9636	22907	22907					0.10038630658891634
LMQILAHLFGG	11	Unmodified	_LMQILAHLFGG_					0	0	0			REV__ENSG00000176540|ENST00000319813|OR4C5	REV__ENSG00000176540|ENST00000319813|OR4C5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3361083865166	2	600.333901	1198.65325	2.1554	0.0012939	-0.77528	-0.00046543	1.3801	0.00082851	600.333331015142	77.37	1.157	77.37	76.592	77.749	0					38	36	2	0	0	0	1.0357	1	32254	32254		1.4819	0.15237	1	535050	+		19849	11184	9598	9637	22908	22908					0.061869244219678876
LMQKLIKHDI	10	Unmodified	_LMQKLIKHDI_					0	0	0		tr|A0A553SKP3|A0A553SKP3_NIACIGTPcyclohydrolase1type2homologOS=NialliacirculansOX=1397GN=CEQ21_19105PE=3SV=1	tr|A0A553SKP3|A0A553SKP3_NIACIGTPcyclohydrolase1type2homologOS=NialliacirculansOX=1397GN=CEQ21_19105PE=3SV=1	tr|A0A553SKP3|A0A553SKP3_NIACIGTPcyclohydrolase1type2homologOS=NialliacirculansOX=1397GN=CEQ21_19105PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8705322146416	2	619.868108	1237.72166	2.0915	0.0012964	1.8558	0.0011504	3.9473	0.0024468	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.89803	1	33012	33012		1.6526	0.17072	1	9211600			19850	16299	9599	9638	22909	22909					0.11231169001894159
LMQLCEVSNH	10	Unmodified	_LMQLCEVSNH_					0	0	0			REV__ENST00000414369.2_1_2:53984069-54014663:-|nuORF	REV__ENST00000414369.2_1_2:53984069-54014663:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.2764160037041	2	587.273183	1172.53181	1.685	0.00098953	3.232	0.0018981	4.917	0.0028876	587.2745868097746	67.609	0.37461	69.479	69.268	69.643	1.87					28	11	3	0	0	0	0.5476	1	28374	28374		25.399	0.72543	1	1944000	+		19851	9431	9600	9639	22910	22910					-0.04755066002803687
LMQRHNNL	8	Unmodified	_LMQRHNNL_					0	0	0			REV__BRCA2|p.L3172Afs*44|1|0.79|ENSG00000139618|chr13:32396908-32396911|TACT/-|frameshift_variant	REV__BRCA2|p.L3172Afs*44|1|0.79|ENSG00000139618|chr13:32396908-32396911|TACT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2703124880791	2	513.269093	1024.52363	3.5907	0.001843	-1.3371	-0.00068627	2.2536	0.0011567	513.2685527589044	81.315	0.71141	82.548	82.255	82.966	1.2332					45	22	3	0	0	0	0.88504	1	34209	34209		5.7604	1.0044	1	2437500	+		19852	8170	9601	9640	22911	22911					0.012351678627283036
LMRLQNLRGGH	11	Unmodified	_LMRLQNLRGGH_					0	0	0		ENSG00000132446|ENST00000359202|FTHL17	ENSG00000132446|ENST00000359202|FTHL17	ENSG00000132446|ENST00000359202|FTHL17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	432.8990051150322	3	432.243546	1293.70881	1.6271	0.00070329	3.8052	0.0016448	5.4323	0.0023481	432.24531965701067	39.357	0.27707	41.193	41.037	41.314	1.8366					15	8	2	0	0	0	0.14606	1	16493	16493		7.4771	2.9482	1	1127400			19853	2532	9602	9641	22912	22912					0.0737015066231379
LMSLIINTF	9	Unmodified	_LMSLIINTF_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant;nc|ENSG00000224411|Q14568|HSP90AA2P;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2975952029228	2	526.296453	1050.57835	3.5582	0.0018726	-0.83755	-0.0004408	2.7206	0.0014318	526.2960192080662	86.528	0.42007	87.655	87.487	87.907	1.1265					39	15	3	0	0	0	0.013238	2	36447	36447;36495		104.8	50.026	1	8647500			19854	1194;1010	9603	9642	22913;22914	22913					0.055087418907760366
LMSLIINTF	9	Unmodified	_LMSLIINTF_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant;nc|ENSG00000224411|Q14568|HSP90AA2P;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2983886599541	2	526.296453	1050.57835	3.964	0.0020863	-1.4278	-0.00075146	2.5362	0.0013348	526.2957640511688	86.05	0.39146	87.597	87.512	87.903	1.547					32	14	3	0	0	0	0.03795	2	36261	36261;36315		77.984	43.882	1	8583000			19855	1194;1010	9603	9642	22915;22916	22915					0.055087418907760366
LMSLIINTF	9	Unmodified	_LMSLIINTF_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant;nc|ENSG00000224411|Q14568|HSP90AA2P;ENST00000556554.1_1_14:102552511-102553379:-|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1051.590014636517	1	1051.58563	1050.57835	4.8219	0.0050706	2.0289	0.0021336	6.8508	0.0072042	1051.5880171283347	86.089	0.16184	87.636	87.584	87.746	1.547					6	5	2	0	0	0	0.076627	1	36288	36288		57.471	15.377	1	3686100			19856	1194;1010	9603	9642	22917	22917					0.055087418907760366
LMSLSKIRIRH	11	Unmodified	_LMSLSKIRIRH_					0	0	0		tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2087890505791	4	339.209141	1352.80746	-1.5694	-0.00053234	0.44016	0.0001493	-1.1292	-0.00038304	339.2089405362541	41.468	1.43	41.468	40.612	42.042	0					110	44	3	0	0	0	1.0224	1	17357	17357		2.4348	1.22	1	2816400			19857	16776	9604	9643	22918	22918					0.1451675390735545
LMTEVNILL	9	Oxidation (M)	_LM(Oxidation (M))TEVNILL_		LM(1)TEVNILL		LM(82)TEVNILL	0	0	1		ENST00000463046.5_1_2:61435991-61439052:-|nuORF	ENST00000463046.5_1_2:61435991-61439052:-|nuORF	ENST00000463046.5_1_2:61435991-61439052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1061.597949206829	1	1061.59111	1060.58383	5.3377	0.0056665	3.7414	0.0039719	9.0792	0.0096384	1061.594139642778	88.658	0.32251	90.105	89.953	90.275	1.4467					17	9	3	0	0	0	0.033794	1	37361	37361		81.613	10.479	1	3937100			19858	6682	9605	9644	22919	22919		107			0.05596420682581993
LMTFDHHPLW	10	Unmodified	_LMTFDHHPLW_					0	0	0		ENST00000380121.7_1_13:33010521-33020605:-|nuORF;nc|ENSG00000244754|Q92802-3|N4BP2L2	ENST00000380121.7_1_13:33010521-33020605:-|nuORF	ENST00000380121.7_1_13:33010521-33020605:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.8143188357353	2	648.813333	1295.61211	2.3116	0.0014998	-1.8948	-0.0012294	0.41677	0.00027041	648.8122319611457	80.23	0.95571	81.481	80.863	81.818	1.2512					74	30	3	0	0	0	0.51515	1	33673	33673		26.884	0.61551	1	1622800			19859	6219	9606	9645	22920	22920					-0.02386836617483823
LMTFDHHPLW	10	Unmodified	_LMTFDHHPLW_					0	0	0		ENST00000380121.7_1_13:33010521-33020605:-|nuORF;nc|ENSG00000244754|Q92802-3|N4BP2L2	ENST00000380121.7_1_13:33010521-33020605:-|nuORF	ENST00000380121.7_1_13:33010521-33020605:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	648.813333	1295.61211	1.4904	0.000967	-2.6535	-0.0017216	-1.1631	-0.00075464	648.8116872303297	79.719	0.95788	81.435	80.89	81.848	1.7167	-0.023088	-0.00050083	NaN	26.884	57	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899280			19860	6219	9606	9645							-0.02386836617483823
LMTIIALLL	9	Unmodified	_LMTIIALLL_					0	0	0		ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1000.652270495892	1	1000.6475	999.640225	4.0297	0.0040323	1.9808	0.0019821	6.0105	0.0060144	1000.6493813163626	99.798	0.073357	99.996	99.945	100.02	0.19767					7	3	3	0	0	0	0.09539	1	42013	42013		50.855	0	1	14050000			19861	869	9607	9646	22921	22921					0.1403909330992974
LMTLMQEKTHV	11	Unmodified	_LMTLMQEKTHV_					0	0	0			REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	665.8483764529228	2	665.846516	1329.67848	5.1383	0.0034213	-2.6104	-0.0017381	2.5279	0.0016832	665.8450805610122	88.144	0.31985	89.2	89.017	89.337	1.0562					24	9	3	0	0	0	0.54522	1	37135	37135		22.736	12.662	1	1196200	+		19862	11178	9608	9647	22922	22922					0.02682611162254034
LMTLMQEKTHV	11	Unmodified	_LMTLMQEKTHV_					0	0	0			REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	665.846516	1329.67848	5.1383	0.0034213	-2.6104	-0.0017381	2.5279	0.0016832	665.8450805610122	88.144	0.31985	89.2	89.017	89.337	1.0562	0.014528	-0.00059912	NaN	22.736	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1196200	+		19863	11178	9608	9647							0.02682611162254034
LMTLMQEKTHV	11	Unmodified	_LMTLMQEKTHV_					0	0	0			REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	REV__nc|ENSG00000176371|Q7Z7L9-4|ZSCAN2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	665.846516	1329.67848	4.4666	0.0029741	-1.4058	-0.00093607	3.0608	0.002038	665.8452863544194	87.676	0.34967	89.171	89.015	89.364	1.4953	-0.014528	0.001005	NaN	22.736	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	967470	+		19864	11178	9608	9647							0.02682611162254034
LMTVLISSL	9	Unmodified	_LMTVLISSL_					0	0	0		ENST00000449081.6_1_6:36438028-36449470:+|nuORF;ENST00000481911.5_1_6:36446898-36449467:+|nuORF	ENST00000449081.6_1_6:36438028-36449470:+|nuORF	ENST00000449081.6_1_6:36438028-36449470:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7911254763603	2	488.791004	975.567454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.516	1	84.186	83.686	84.686	1.67								0	0	0	0.26021	1	34615	34615		21.747	4.8044	1				19865	6596	9609	9648	22923	22923					0.0786933951650326
LMTVLTSISL	10	Unmodified	_LMTVLTSISL_					0	0	0			REV__ENSG00000197674|ENST00000641159|OR51C1P	REV__ENSG00000197674|ENST00000641159|OR51C1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3177978396416	2	539.314843	1076.61513	4.3183	0.0023289	0.2153	0.00011612	4.5336	0.002445	539.3150546838378	94.287	0.62416	95.028	94.7	95.325	0.74124					58	19	5	0	0	0	0.77604	1	39649	39649		14.838	14.838	1	12816000	+		19866	11687	9610	9649	22924	22924					0.079889937166854
LMTVVFDF	8	Unmodified	_LMTVVFDF_					0	0	0			REV__nc|ENSG00000166762|Q96P56-4|CATSPER2	REV__nc|ENSG00000166762|Q96P56-4|CATSPER2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	324.7143127322197	3	324.50174	970.48339	-2.886	-0.0009365	0.0025064	8.1334E-07	-2.8835	-0.00093569	324.5011891077086	22.501	0.43504	22.501	22.432	22.867	0					22	14	2	0	0	0	2.3239	1	9495	9495		1.6526	0	1	729010	+		19867	10835	9611	9650	22925	22925					-0.0030319158040583716
LMVLLVPPAL	10	Unmodified	_LMVLLVPPAL_					0	0	0		chr17:50186922-50189377|136|540.86|0.66|9.68|-|1|COL1A1,COL1A1|1	chr17:50186922-50189377|136|540.86|0.66|9.68|-|1|COL1A1,COL1A1|1	chr17:50186922-50189377|136|540.86|0.66|9.68|-|1|COL1A1,COL1A1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.3411743044853	2	533.340664	1064.66677	2.5007	0.0013337	-1.3973	-0.00074522	1.1035	0.00058852	533.3399740136356	83.791	0.99835	84.061	83.77	84.768	0.27029					89	31	5	0	0	0	0.89803	1	35047	35047		0.45834	0	1	165320000			19868	217	9612	9651	22926	22926					0.1370278220124419
LMVLVESRKPK	11	Unmodified	_LMVLVESRKPK_					0	0	0		ENSG00000111886|ENST00000402938|GABRR2;nc|ENSG00000111886|P28476-2|GABRR2;ENST00000602808.1_1_6:89980180-90024845:-|nuORF;GABRR2|p.S122Afs*2|1|0.12|ENSG00000111886|chr6:89269159-89269159|T/-|frameshift_variant	ENSG00000111886|ENST00000402938|GABRR2	ENSG00000111886|ENST00000402938|GABRR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3954955935478	2	650.39449	1298.77443	1.7147	0.0011152	2.0743	0.0013491	3.789	0.0024643	650.3956760346166	77.853	0.76601	79.605	79.32	80.086	1.7514					63	24	3	0	0	0	1.0362	1	32688	32688		1.3295	0.13619	1	1890400			19869	1761	9613	9652	22927	22927					0.13699127064660388
LMVPGTRH	8	Unmodified	_LMVPGTRH_					0	0	0		nc|ENSG00000248290|Q16473|TNXA;ENST00000507684.1_1_6:31978569-31980175:-|nuORF;nc|ENSG00000168477|P22105-2|TNXB;nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB	nc|ENSG00000248290|Q16473|TNXA;nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7503539919853	2	455.750005	909.485456	2.7209	0.0012401	0.55488	0.00025288	3.2758	0.001493	455.74974485658777	77.355	0.31828	78.635	78.442	78.76	1.2809					14	9	2	0	0	0	0.88587	1	32472	32472		5.2307	0	1	403260			19870	4036;8007	9614	9653	22928	22928					0.027092819480685648
LMVPGTRH	8	Unmodified	_LMVPGTRH_					0	0	0		nc|ENSG00000248290|Q16473|TNXA;ENST00000507684.1_1_6:31978569-31980175:-|nuORF;nc|ENSG00000168477|P22105-2|TNXB;nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB	nc|ENSG00000248290|Q16473|TNXA;nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	455.750005	909.485456	1.8075	0.00082376	-4.1105	-0.0018733	-2.303	-0.0010496	455.7481368593461	78.858	0.1826	78.858	78.724	78.907	0	0.16574	-0.0034987	NaN	5.2307	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	451170			19871	4036;8007	9614	9653							0.027092819480685648
LMVPGTRH	8	Unmodified	_LMVPGTRH_					0	0	0		nc|ENSG00000248290|Q16473|TNXA;ENST00000507684.1_1_6:31978569-31980175:-|nuORF;nc|ENSG00000168477|P22105-2|TNXB;nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB	nc|ENSG00000248290|Q16473|TNXA;nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	455.750005	909.485456	2.2298	0.0010162	0.24226	0.00011041	2.472	0.0011266	455.7498724728976	76.816	0.31868	78.583	78.45	78.768	1.7672	-0.10914	0.00046883	NaN	5.2307	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	672480			19872	4036;8007	9614	9653							0.027092819480685648
LMWKTRLKYLY	11	Unmodified	_LMWKTRLKYLY_					0	0	0			REV__ENSG00000203909|ENST00000370370|DPPA5	REV__ENSG00000203909|ENST00000370370|DPPA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	757.9344970583916	2	757.93124	1513.84793	2.7636	0.0020946	1.2342	0.00093543	3.9978	0.0030301	757.9319678541312	87.043	0.851	87.043	86.612	87.463	0					100	34	3	0	0	0	1.0393	1	36447	36447		0.35063	0	1	555940000	+		19873	11767	9615	9654	22929	22929					0.11155675507143314
LNAKPDWPSAK	11	Unmodified	_LNAKPDWPSAK_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.5562927126884	3	409.555784	1225.64552	-0.39338	-0.00016111	1.4679	0.0006012	1.0746	0.00044009	409.5564054502001	20.989	0.31183	20.989	20.848	21.16	0					19	9	3	0	0	0	0.91768	1	8711	8711		4.4062	0.28952	1	844950			19874	1919	9616	9655	22930	22930					0.04172488426070231
LNARARKPA	9	Unmodified	_LNARARKPA_					0	0	0			REV__ENST00000479209.1_1_3:150264314-150264518:-|nuORF	REV__ENST00000479209.1_1_3:150264314-150264518:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.8728210330009	3	332.873559	995.598846	-1.829	-0.00060883	-1.5463	-0.00051472	-3.3753	-0.0011235	332.8733695424742	40.97	0.57619	40.97	40.698	41.274	0					73	17	5	0	0	0	0.82114	1	17213	17213		2.4985	1.0166	1	278180000	+		19875	13334	9617	9656	22931	22931					0.10087093385459411
LNASFFTDK	9	Unmodified	_LNASFFTDK_					0	0	0			REV__ENST00000431484.1_1_2:166627280-166651008:-|nuORF	REV__ENST00000431484.1_1_2:166627280-166651008:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.3279907107353	2	521.763832	1041.51311	3.6347	0.0018965	-1.8349	-0.00095739	1.7998	0.00093907	521.7613986262509	73.854	0.37636	75.172	74.998	75.374	1.318					24	11	3	0	0	0	0.052918	1	31018	31018		47.749	0	1	7686800	+		19876	13025	9618	9657	22932	22932					-0.00598536310712916
LNEEDSLFK	9	Unmodified	_LNEEDSLFK_					0	0	0			REV__ENST00000525645.1_1_11:112097166-112099431:+|nuORF	REV__ENST00000525645.1_1_11:112097166-112099431:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.7737304568291	2	547.771854	1093.52915	0.26579	0.00014559	1.8607	0.0010193	2.1265	0.0011649	547.7726426188156	14.427	0.18592	14.427	14.317	14.503	0					10	5	2	0	0	0	0.40005	1	5982	5982		21.747	0	1	682190	+		19877	10391	9619	9658	22933	22933					-0.01386874864465426
LNEKRTSEYY	10	Unmodified	_LNEKRTSEYY_					0	0	0			REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8821594119072	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1573	1	7.7844	7.2844	8.2844	0.62713								0	0	0	0.66254	1	2961	2961		0.15932	0	1		+	+	19878	14162	9620	9659	22934	22934					-0.013567270243584062
LNELQIQV	8	Unmodified	_LNELQIQV_					0	0	0			REV__PLXNB1|p.K1523N|1|0.15|ENSG00000164050|chr3:48413136-48413136|C/A|missense_variant	REV__PLXNB1|p.K1523N|1|0.15|ENSG00000164050|chr3:48413136-48413136|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7716552615166	2	478.7742	955.533846	3.0266	0.0014491	-3.6281	-0.001737	-0.60152	-0.00028799	478.7716681199029	62.561	0.29259	63.974	63.869	64.162	1.4134					13	9	2	0	0	0	0.55531	1	26244	26244		43.858	5.6827	1	3642400	+		19879	10713	9621	9660	22935	22935					0.0543005406894963
LNFINDCNISV	11	Unmodified	_LNFINDCNISV_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1;DICER1|p.F816Ifs*18|1|0.04|ENSG00000100697|chr14:95108084-95108085|-/CCTTGAAGAT|frameshift_variant	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	626.3093749880791	2	626.305538	1250.59652	2.0099	0.0012588	2.1639	0.0013553	4.1738	0.0026141	626.3074082645043	40.587	0.27091	40.587	40.427	40.698	0					19	8	3	0	0	0	0.85967	1	16988	16988		12.241	0	1	1121800			19880	1297	9622	9661	22936	22936					-0.018751679251636233
LNFINDCNISV	11	Unmodified	_LNFINDCNISV_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1;DICER1|p.F816Ifs*18|1|0.04|ENSG00000100697|chr14:95108084-95108085|-/CCTTGAAGAT|frameshift_variant	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8085204958916	2	626.305538	1250.59652	1.6298	0.0010208	0.92137	0.00057706	2.5512	0.0015978	626.3065388250666	38.782	0.30742	40.078	39.919	40.226	1.2961					18	9	3	0	0	0	0.80586	1	16245	16245		15.248	3.0078	1	2131500			19881	1297	9622	9661	22937	22937					-0.018751679251636233
LNFINDCNISV	11	Unmodified	_LNFINDCNISV_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1;DICER1|p.F816Ifs*18|1|0.04|ENSG00000100697|chr14:95108084-95108085|-/CCTTGAAGAT|frameshift_variant	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3068115115166	2	626.305538	1250.59652	0.43741	0.00027395	2.5833	0.0016179	3.0207	0.0018919	626.3076015455291	38.139	0.31272	39.959	39.818	40.131	1.8202					20	9	3	0	0	0	0.80586	1	16036	16036		15.248	2.206	1	1950400			19882	1297	9622	9661	22938	22938					-0.018751679251636233
LNFVEIWMY	9	Unmodified	_LNFVEIWMY_					0	0	0		ENST00000512687.5_1_5:68530748-68551520:+|nuORF	ENST00000512687.5_1_5:68530748-68551520:+|nuORF	ENST00000512687.5_1_5:68530748-68551520:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2116577029228	2	607.79936	1213.58417	2.5027	0.0015212	-0.070475	-4.2835E-05	2.4323	0.0014783	607.8002296466962	88.44	0.12502	88.675	88.598	88.723	0.23471					5	3	2	0	0	0	0.11908	1	37103	37103		2.0598	0	1	166070			19883	7042	9623	9662	22939	22939					-0.01408159597554004
LNGAKGGN	8	Unmodified	_LNGAKGGN_					0	0	0		ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.6955444216728	2	365.695752	729.376952	-0.080628	-2.9485E-05	-0.80846	-0.00029565	-0.88909	-0.00032514	365.695386794167	0.46598	0.09079	0.62442	0.57833	0.66912	0.15844					8	4	2	0	0	0	0.76103	1	195	195		24.674	7.7316	1	321360			19884	1643	9624	9663	22940	22940					0.001438139692936602
LNGAKGGN	8	Unmodified	_LNGAKGGN_					0	0	0		ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.6960937380791	2	365.695752	729.376952	-1.4656	-0.00053595	1.6518	0.00060406	0.18622	6.8101E-05	365.6962860136486	0.36743	0.12162	1.0348	0.97973	1.1014	0.66738					8	5	2	0	0	0	0.87276	1	150	150		13.508	0.97634	1	375520			19885	1643	9624	9663	22941	22941					0.001438139692936602
LNGAKGGN	8	Unmodified	_LNGAKGGN_					0	0	0		ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	ENSG00000108666|ENST00000577809|C17orf75	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.6956054568291	2	365.695752	729.376952	-0.3112	-0.0001138	-0.096998	-3.5472E-05	-0.40819	-0.00014928	365.69582255971983	0.33876	0.1564	1.0745	0.98998	1.1464	0.73579					14	7	3	0	0	0	0.87276	1	146	146		13.508	0.97634	1	443830			19886	1643	9624	9663	22942	22942					0.001438139692936602
LNGLGKQG	8	Unmodified	_LNGLGKQG_					0	0	0		tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	tr|A0A7D6VRL8|A0A7D6VRL8_9CLOTStageVsporulationproteinBOS=ClostridiumintestinaleOX=36845GN=spoVBPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	786.9576293826103	1	786.446828	785.439552	3.1494	0.0024769	0.54901	0.00043176	3.6985	0.0029086	786.4475502690582	97.934	0.19196	98.161	98.041	98.233	0.22776					11	6	2	0	0	0	2.3239	1	41218	41218		1.8442	0	1	8543800			19887	16834	9625	9664	22943	22943					0.03824960037468372
LNGLVLKVLHK	11	Unmodified	_LNGLVLKVLHK_					0	0	0			REV__nc|ENSG00000163629|Q12923-2|PTPN13	REV__nc|ENSG00000163629|Q12923-2|PTPN13	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.5242797732353	4	309.206496	1232.79688	-2.9367	-0.00090805	-3.2923	-0.001018	-6.229	-0.0019261	309.4563618774312	25.478	0.67909	25.478	25.223	25.902	0					46	21	3	0	0	0	0.14606	1	10757	10757		0.073264	0	1	491750	+		19888	10695	9626	9665	22944	22944					0.18979094524593165
LNKAYDEEIK	10	Unmodified	_LNKAYDEEIK_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.2162963747978	3	408.215316	1221.62412	0.3555	0.00014512	1.7261	0.00070462	2.0816	0.00084974	408.2161719697631	12.666	0.40033	12.755	12.586	12.986	0.089381					35	12	4	0	0	0	0.14932	1	5250	5250		55.235	9.2123	1	3715100	+		19889	8514	9627	9666	22945	22945					0.022170586066977194
LNKAYDEEIK	10	Unmodified	_LNKAYDEEIK_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2166931033134	3	408.215316	1221.62412	-0.52293	-0.00021347	2.2012	0.00089855	1.6782	0.00068508	408.2163553862912	12.244	0.31715	12.938	12.82	13.137	0.69396					21	9	3	0	0	0	0.77494	1	5082	5082		14.957	1.4385	1	1689200	+		19890	8514	9627	9666	22946	22946					0.022170586066977194
LNKAYDEEIK	10	Unmodified	_LNKAYDEEIK_					0	0	0			REV__nc|ENSG00000007237|O60861-2|GAS7	REV__nc|ENSG00000007237|O60861-2|GAS7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	408.215316	1221.62412	-0.79018	-0.00032257	3.1824	0.0012991	2.3922	0.00097655	408.21673392831434	12.914	0.55477	12.914	12.746	13.301	0	0.047099	0.00091938	NaN	55.235	59	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17600000	+		19891	8514	9627	9666							0.022170586066977194
LNKCLRLRVH	10	Unmodified	_LNKCLRLRVH_					0	0	0			REV__nc|ENSG00000166589|O75309-3|CDH16	REV__nc|ENSG00000166589|O75309-3|CDH16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6926757693291	4	313.692121	1250.73938	-0.29721	-9.3233E-05	1.9046	0.00059745	1.6073	0.00050421	313.69266729433843	28.894	0.54902	30.177	29.794	30.343	1.2825					68	17	5	0	0	0	0.89803	1	12157	12157		0.62683	0.62683	1	30056000	+		19892	8194	9628	9667	22947	22947					0.1240392904737746
LNKDKLYNI	9	Unmodified	_LNKDKLYNI_					0	0	0			REV__tr|A0A553SRM3|A0A553SRM3_NIACIPutativeamidasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01385PE=4SV=1	REV__tr|A0A553SRM3|A0A553SRM3_NIACIPutativeamidasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8205444216728	2	560.821681	1119.62881	1.4915	0.00083648	-1.4604	-0.00081902	0.031124	1.7455E-05	560.8212221802087	53.931	0.8165	55.332	55.111	55.927	1.4005					55	26	3	0	0	0	0.48482	1	22756	22756		23.148	10.617	1	11614000	+		19893	15167	9629	9668	22948	22948					0.07377987540144204
LNKKAKEFY	9	Unmodified	_LNKKAKEFY_					0	0	0		tr|A0A7D6VTW2|A0A7D6VTW2_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23115PE=4SV=1	tr|A0A7D6VTW2|A0A7D6VTW2_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23115PE=4SV=1	tr|A0A7D6VTW2|A0A7D6VTW2_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8863403201103	3	380.885241	1139.63389	0.27359	0.00010421	1.8291	0.00069667	2.1027	0.00080087	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.77025	1	21368	21368		4.5289	1.2092	1	18085000			19894	16933	9630	9669	22949	22949					0.06966291402773095
LNKKIPTIVRP	11	Unmodified	_LNKKIPTIVRP_					0	0	0		ENSG00000249709|ENST00000339282|ZNF564;ENST00000593682.1_1_19:12637262-12688404:-|nuORF	ENSG00000249709|ENST00000339282|ZNF564	ENSG00000249709|ENST00000339282|ZNF564	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.4627868533134	4	320.461862	1277.81834	-0.13358	-4.2807E-05	4.2765	0.0013705	4.1429	0.0013276	320.46359868324333	22.475	0.54033	24.09	23.738	24.278	1.6158					22	17	2	0	0	0	1.0391	1	9428	9428		0.40827	0.041592	1	429790			19895	5375	9631	9670	22950	22950					0.19054479553301462
LNKLIGRYS	9	Unmodified	_LNKLIGRYS_					0	0	0		nc|ENSG00000112742|P33981-2|TTK;chr6:80022472-80026381|411|14.54|0.51|4.83|+|ENST00000509894|TTK,TTK;ENSG00000112742|ENST00000369798|TTK;ENST00000430061.2_1_6:80715671-80721208:+|nuORF;TTK|p.K344Efs*3|1|0.22|ENSG00000112742|chr6:80014506-80014507|AA/-|frameshift_variant	nc|ENSG00000112742|P33981-2|TTK	nc|ENSG00000112742|P33981-2|TTK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	532.7687866091728	2	532.316566	1062.61858	2.0678	0.0011007	4.2942	0.0022859	6.362	0.0033866	532.3196398824871	65.203	0.40524	67.111	66.907	67.312	1.9085					17	12	2	0	0	0	0.098208	1	27265	27265		18.146	6.5061	1	1242800			19896	277	9632	9671	22951	22951					0.0897742460556401
LNKLYQVNI	9	Unmodified	_LNKLYQVNI_					0	0	0		tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8275024294853	2	552.824224	1103.63389	1.4111	0.00078008	0.43382	0.00023983	1.8449	0.0010199	552.82444080855	65.196	0.60197	65.196	64.977	65.579	0					49	18	4	0	0	0	0.27148	1	27124	27124		26.884	5.137	1	9442900			19897	17085	9633	9672	22952	22952					0.08622291402775772
LNKLYQVNI	9	Unmodified	_LNKLYQVNI_					0	0	0		tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8254272341728	2	552.824224	1103.63389	2.2106	0.0012221	-0.3889	-0.00021499	1.8217	0.0010071	552.8240901946891	63.536	0.65214	64.949	64.659	65.311	1.4134					63	20	5	0	0	0	0.13873	2	26577	26577;26721		39.957	5.0253	1	46705000			19898	17085	9633	9672	22953;22954	22953					0.08622291402775772
LNKLYQVNI	9	Unmodified	_LNKLYQVNI_					0	0	0		tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	tr|A0A7D6ZHG8|A0A7D6ZHG8_9CLOTGlycosidehydrolasefamily65proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8253661990166	2	552.824224	1103.63389	2.2287	0.0012321	-0.49736	-0.00027495	1.7313	0.00095711	552.8240190254432	62.915	0.65167	64.86	64.628	65.279	1.9444					65	20	5	0	0	0	0.051699	3	26388	26345;26388;26427		67.344	3.3833	1	40610000			19899	17085	9633	9672	22955;22956;22957	22956					0.08622291402775772
LNKQGGSL	8	Unmodified	_LNKQGGSL_					0	0	0			REV__ENST00000379958.2_1_7:92732508-92732580:-|nuORF	REV__ENST00000379958.2_1_7:92732508-92732580:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	408.2166931033134	2	408.732335	815.450116	-0.49942	-0.00020413	1.2473	0.00050979	0.74783	0.00030566	408.7327519756319	12.396	0.31025	13.089	12.917	13.227	0.69396					25	9	4	0	0	0	2.3239	1	5082	5082		18.135	2.2878	1	8517400	+		19900	12749	9634	9673	22958	22958					0.03500942691914588
LNKQYAFKV	9	Unmodified	_LNKQYAFKV_					0	0	0		tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.8227416872978	2	555.818941	1109.62333	1.6954	0.00094233	1.6048	0.00089199	3.3002	0.0018343	555.8201936502855	47.351	0.26663	47.681	47.544	47.81	0.33034					13	8	2	0	0	0	0.46905	1	19856	19856		16.942	0.79319	1	596340			19901	16639	9635	9674	22959	22959					0.0729030874831551
LNKQYAFKV	9	Unmodified	_LNKQYAFKV_					0	0	0		tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	555.818941	1109.62333	1.489	0.00082764	-0.78183	-0.00043456	0.70721	0.00039308	555.8183403840424	47.823	0.28357	47.823	47.653	47.936	0	0.070805	-0.00073766	NaN	16.942	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	656840			19902	16639	9635	9674							0.0729030874831551
LNKVEQKQL	9	Unmodified	_LNKVEQKQL_					0	0	0			REV__nc|ENSG00000111679|P29350-2|PTPN6	REV__nc|ENSG00000111679|P29350-2|PTPN6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2183715701103	2	550.327131	1098.63971	0.76715	0.00042218	1.4644	0.00080592	2.2316	0.0012281	550.3281108273856	30.328	0.24873	32.143	32.013	32.262	1.8151					11	7	2	0	0	0	0.11833	1	12723	12723		4.3292	0.38484	1	354700	+		19903	9336	9636	9675	22960	22960					0.09433389914443069
LNKVLGHNV	9	Unmodified	_LNKVLGHNV_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|47|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|47|2|sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|47|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2965881228447	2	497.295633	992.576714	1.2282	0.0006108	0.32931	0.00016376	1.5575	0.00077456	497.2958788100562	23.244	0.27462	24.458	24.29	24.565	1.2145					18	8	3	0	0	0	0.46905	1	9687	9687		16.942	5.302	1	1104300			19904	7702	9637	9676	22961	22961					0.08012868917057858
LNLGRNKF	8	Unmodified	_LNLGRNKF_					0	0	0			REV__ENST00000205402.9_1_7:107556023-107556089:+|nuORF	REV__ENST00000205402.9_1_7:107556023-107556089:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2857543826103	2	481.282526	960.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.786	1	89.281	88.781	89.781	1.4953								0	0	0	1.0178	1	37005	37005		2.3027	0.4585	1		+		19905	12055	9638	9677	22962	22962					0.06864599745563282
LNLLSNVLN	9	Unmodified	_LNLLSNVLN_					0	0	0			REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A	REV__nc|ENSG00000151553|Q5W0V3-2|FHIP2A	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2971679568291	2	500.295299	998.576045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.381	1	41.698	41.198	42.198	0.31683								0	0	0	0.33422	1	17383	17383		15.248	2.7169	1		+		19906	10403	9639	9678	22963	22963					0.07670029477321805
LNMLPLEP	8	Unmodified	_LNMLPLEP_					0	0	0			REV__ENSG00000128915|ENST00000261520|ICE2	REV__ENSG00000128915|ENST00000261520|ICE2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	309.5243408083916	3	309.505373	925.494289	0.18241	5.6458E-05	0.67845	0.00020998	0.86086	0.00026644	309.5056697816408	25.344	0.49208	25.596	25.397	25.889	0.25197					31	15	3	0	0	0	2.3239	1	10572	10572		1.4819	0	1	1285200	+		19907	9742	9640	9679	22964	22964					0.028562107938796544
LNNHRQML	8	Unmodified	_LNNHRQML_					0	0	0		BRCA2|p.L3172Afs*44|1|0.79|ENSG00000139618|chr13:32396908-32396911|TACT/-|frameshift_variant;BRCA2|p.M3322*|1|0.04|ENSG00000139618|chr13:32398476-32398476|G/-|frameshift_variant;ENSG00000139618|ENST00000380152|BRCA2	BRCA2|p.L3172Afs*44|1|0.79|ENSG00000139618|chr13:32396908-32396911|TACT/-|frameshift_variant	BRCA2|p.L3172Afs*44|1|0.79|ENSG00000139618|chr13:32396908-32396911|TACT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2711669802666	2	513.269093	1024.52363	1.4879	0.00076367	2.5317	0.0012995	4.0196	0.0020631	513.270075611308	77.421	0.31296	79.173	78.977	79.29	1.7514					20	9	3	0	0	0	0.82039	1	32455	32455		19.439	0	1	1698800			19908	107	9641	9680	22965	22965					0.012351678627283036
LNNHVYRR	8	Unmodified	_LNNHVYRR_					0	0	0		nc|ENSG00000178202|Q7Z4H8-3|POGLUT3;nc|ENSG00000178202|Q7Z4H8-2|POGLUT3;ENSG00000178202|ENST00000323468|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	nc|ENSG00000178202|Q7Z4H8-3|POGLUT3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1642333865166	2	536.293956	1070.57336	1.6703	0.00089575	0.86849	0.00046577	2.5387	0.0013615	536.2942584288598	41.652	0.25728	41.652	41.531	41.789	0					19	7	3	0	0	0	2.3239	1	17482	17482		2.3027	0	1	1723600			19909	4477	9642	9681	22966	22966					0.04089618863031319
LNNSNIPRFGV	11	Unmodified	_LNNSNIPRFGV_					0	0	0		nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;DNM2-PDE4A|1|fusion;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;ENSG00000065989|ENST00000380702|PDE4A;ENST00000586275.1_1_19:10563984-10570204:+|nuORF	nc|ENSG00000065989|P27815-4|PDE4A	nc|ENSG00000065989|P27815-4|PDE4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8348266482353	2	615.833111	1229.65167	1.3897	0.00085581	1.7704	0.0010903	3.1601	0.0019461	615.8342935182491	43.017	0.37525	44.357	44.14	44.515	1.3399					28	11	3	0	0	0	0.96769	1	18056	18056		5.7319	0.43497	1	2598200			19910	424	9643	9682	22967	22967					0.04603006657612241
LNNYQVRC	8	Unmodified	_LNNYQVRC_					0	0	0			REV__ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	REV__ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2487975955009	2	505.247826	1008.4811	2.1096	0.0010659	1.8591	0.00093931	3.9687	0.0020052	505.2487848830197	50.044	0.22094	50.374	50.295	50.516	0.33019					11	6	2	0	0	0	0.88587	1	20966	20966		5.2307	0	1	736260	+		19911	11772	9644	9683	22968	22968					-0.022802272655098932
LNPFLYAFL	9	Unmodified	_LNPFLYAFL_					0	0	0		nc|ENSG00000288611|P48145|NPBWR1;ENSG00000125522|ENST00000684052|NPBWR2;nc|ENSG00000164270|Q13639-7|HTR4;nc|ENSG00000164270|Q13639-3|HTR4;nc|ENSG00000164270|Q13639-5|HTR4;nc|ENSG00000164270|Q13639-4|HTR4;nc|ENSG00000164270|Q13639-2|HTR4;ENSG00000164270|ENST00000377888|HTR4;nc|ENSG00000164270|Q13639-6|HTR4;nc|ENSG00000164270|Q13639-9|HTR4;nc|ENSG00000164270|Q13639-8|HTR4	nc|ENSG00000288611|P48145|NPBWR1	nc|ENSG00000288611|P48145|NPBWR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	549.3032714724541	2	549.305136	1096.59572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.99	1	105.05	104.55	105.55	0.056801								0	0	0	0.42693	1	44420	44420		2.0598	0.21551	1				19912	8018	9645	9684	22969	22969					0.05128405488062526
LNPNYCRSK	9	Unmodified	_LNPNYCRSK_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000563766.5_1_16:22314265-22320362:+|nuORF;ENST00000564256.1_1_16:22316488-22321235:+|nuORF;POLR3E|p.V433Sfs*5|1|0.04|ENSG00000058600|chr16:22325210-22325210|A/-|frameshift_variant	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.5181762576103	3	365.518564	1093.53386	0.068393	2.4999E-05	-2.1271	-0.00077751	-2.0587	-0.00075251	365.51788232651205	14.387	0.31469	14.5	14.291	14.605	0.11295					20	9	3	0	0	0	0.42305	1	5953	5953		13.615	2.8154	1	958870			19913	737	9646	9685	22970	22970					-0.009162692027075536
LNPNYCRSK	9	Unmodified	_LNPNYCRSK_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E;ENST00000563766.5_1_16:22314265-22320362:+|nuORF;ENST00000564256.1_1_16:22316488-22321235:+|nuORF;POLR3E|p.V433Sfs*5|1|0.04|ENSG00000058600|chr16:22325210-22325210|A/-|frameshift_variant	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.5177184939384	3	365.518564	1093.53386	-1.085	-0.00039658	-0.99137	-0.00036236	-2.0764	-0.00075895	365.51844178785046	13.91	0.29666	14.637	14.535	14.831	0.72639					16	9	3	0	0	0	0.53525	1	5788	5788		9.544	2.4423	1	587940			19914	737	9646	9685	22971	22971					-0.009162692027075536
LNPYTLYTF	9	Unmodified	_LNPYTLYTF_					0	0	0		ENST00000503088.1_1_5:38490841-38530749:-|nuORF;ENSG00000113594|ENST00000453190|LIFR	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2915527224541	2	566.289682	1130.56481	2.0962	0.0011871	0.5241	0.0002968	2.6203	0.0014839	566.2906654274777	71.364	0.81953	72.705	72.364	73.184	1.3415					51	26	2	0	0	0	0.19075	1	29976	29976		34.102	0	1	3783900			19915	1831	9647	9686	22972	22972					0.004752073831923553
LNPYTLYTF	9	Unmodified	_LNPYTLYTF_					0	0	0		ENST00000503088.1_1_5:38490841-38530749:-|nuORF;ENSG00000113594|ENST00000453190|LIFR	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2918578982353	2	566.289682	1130.56481	1.0609	0.0006008	-1.2213	-0.00069162	-0.16039	-9.0829E-05	566.7904118823144	70.84	0.91879	72.677	72.381	73.299	1.8378					70	29	4	0	0	0	0.39927	1	29738	29738		20.454	0	1	3765000			19916	1831	9647	9686	22973	22973					0.004752073831923553
LNQAIVGL	8	Unmodified	_LNQAIVGL_					0	0	0			REV__ENST00000540840.1_1_4:110925670-110933339:+|nuORF	REV__ENST00000540840.1_1_4:110925670-110933339:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.2542297244072	2	414.252903	826.491253	2.2436	0.00092944	0.45091	0.00018679	2.6946	0.0011162	414.2532206837039	50.435	0.21567	51.829	51.678	51.894	1.3938					10	6	2	0	0	0	0.68174	1	21129	21129		32.117	0	1	692680	+		19917	13781	9648	9687	22974	22974					0.07106703731381003
LNQFTEDKPT	10	Unmodified	_LNQFTEDKPT_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MSMS	GG20161007_CRH_Patient100_A02_01	1	596.7955200076103	2	596.79586	1191.57717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.578	1	80.578	80.078	81.078	0								0	0	0	0.65676	1	33553	33553		8.1555	0.54658	1				19918	4088	9649	9688	22975	22975					-0.010958009444266281
LNQKVQTQL	9	Unmodified	_LNQKVQTQL_					0	0	0		sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1;sp|P16785|LTP_HCMVALargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL48PE=1SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	sp|Q6SW84|LTP_HCMVMLargetegumentproteindeneddylaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL48PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1628906130791	2	536.31148	1070.60841	1.914	0.0010265	-3.3067	-0.0017734	-1.3927	-0.00074692	536.3089033885572	42.408	0.25035	44.329	44.227	44.478	1.9211					9	7	2	0	0	0	0.11684	1	17773	17773		7.9102	0.62092	1	482510			19919	15997	9650	9689	22976	22976					0.07592816880332975
LNRRFGRK	8	Unmodified	_LNRRFGRK_					0	0	0			REV__ZNFX1|p.E702G|1|0.08|ENSG00000124201|chr20:49264762-49264762|T/C|missense_variant	REV__ZNFX1|p.E702G|1|0.08|ENSG00000124201|chr20:49264762-49264762|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.8215820193291	2	523.820141	1045.62573	2.1548	0.0011287	0.57312	0.00030021	2.7279	0.001429	523.8202258152819	80.938	1.0776	81.229	80.655	81.732	0.29056					78	34	3	0	0	0	0.89178	1	33756	33756		0.69038	0	1	2133500	+		19920	15946	9651	9690	22977	22977					0.10474201996657939
LNRRRKRKKTG	11	Unmodified	_LNRRRKRKKTG_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	706.9586059451103	2	706.955292	1411.89603	2.6944	0.0019048	1.7485	0.0012361	4.4429	0.0031409	706.9562104795876	105.8	0.14857	105.96	105.89	106.04	0.1586					17	7	3	0	0	0	1.0362	1	45142	45142		1.3295	0	1	73037000	+		19921	10416	9652	9691	22978	22978					0.2065593026204624
LNRRRRRERRD	11	Unmodified	_LNRRRRRERRD_					0	0	0		ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	MSMS	GG20161007_CRH_Patient100_W632_02	4	791.9673339724541	2	791.964711	1581.91487	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.1	1	102.29	101.79	102.79	0.19076								0	0	0	0.63775	1	42935	42935		0.30703	0.03801	1				19922	3269	9653	9692	22979	22979					0.14718859885806523
LNSEVALTI	9	Unmodified	_LNSEVALTI_					0	0	0		tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	959.5428954958916	1	959.540788	958.533512	2.3328	0.0022384	-0.17846	-0.00017124	2.1544	0.0020672	959.5416844759183	61.451	0.70768	62.869	62.312	63.02	1.4177					29	22	2	0	0	0	0.037098	1	25749	25749		78.728	3.799	1	2052900			19923	17043	9654	9693	22980	22980					0.05258634349092972
LNSFWFIL	8	Unmodified	_LNSFWFIL_					0	0	0		ENST00000478361.6_1_10:94234505-94239065:-|nuORF	ENST00000478361.6_1_10:94234505-94239065:-|nuORF	ENST00000478361.6_1_10:94234505-94239065:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.7515746951103	2	520.284203	1038.55385	1.7556	0.00091341	1.0059	0.00052335	2.7615	0.0014368	520.282724540252	49.272	0.49815	51.249	51.008	51.506	1.9772					29	15	3	0	0	0	2.3239	1	20699	20699		13.508	0	1	1765800			19924	6801	9655	9694	22981	22981					0.03611849799585798
LNSNLYKVM	9	Unmodified	_LNSNLYKVM_					0	0	0			REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2891723513603	2	541.289159	1080.56377	1.2419	0.00067223	0.070295	3.805E-05	1.3122	0.00071028	541.289152246336	22.832	0.24753	24.047	23.919	24.166	1.2145					17	7	3	0	0	0	0.39927	1	9543	9543		20.454	1.0146	1	887260	+		19925	15320	9656	9695	22982	22982					0.026706697426334358
LNSNLYKVM	9	Unmodified	_LNSNLYKVM_					0	0	0			REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2901489138603	2	541.289159	1080.56377	0.56963	0.00030834	0.29891	0.0001618	0.86855	0.00047013	541.2900657206973	22.444	0.27531	24.06	23.89	24.165	1.6158					17	8	3	0	0	0	0.27148	1	9359	9359		26.884	0.61551	1	634030	+		19926	15320	9656	9695	22983	22983					0.026706697426334358
LNSNLYKVM	9	Unmodified	_LNSNLYKVM_					0	0	0			REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	541.289159	1080.56377	1.2419	0.00067223	0.070295	3.805E-05	1.3122	0.00071028	541.289152246336	22.832	0.24753	24.047	23.919	24.166	1.2145	-0.0064009	-7.0998E-05	NaN	26.884	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	887260	+		19927	15320	9656	9695							0.026706697426334358
LNSNLYKVM	9	Unmodified	_LNSNLYKVM_					0	0	0			REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	REV__tr|A0A7D6VMP6|A0A7D6VMP6_9CLOTUvrABCsystemproteinAOS=ClostridiumintestinaleOX=36845GN=HZF06_12625PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	541.289159	1080.56377	0.56963	0.00030834	0.29891	0.0001618	0.86855	0.00047013	541.2900657206973	22.444	0.27531	24.06	23.89	24.165	1.6158	0.0064009	0.0001765	NaN	26.884	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634030	+		19928	15320	9656	9695							0.026706697426334358
LNVKHLLLLSY	11	Unmodified	_LNVKHLLLLSY_					0	0	0			REV__tr|A0A7D7A265|A0A7D7A265_9CLOTSite-2proteasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18420PE=3SV=1	REV__tr|A0A7D7A265|A0A7D7A265_9CLOTSite-2proteasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18420PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	656.9092895388603	2	656.903005	1311.79146	2.6279	0.0017263	3.1383	0.0020616	5.7662	0.0037879	656.9047016161086	95.834	0.2779	95.957	95.801	96.079	0.12331					32	9	4	0	0	0	1.039	1	40080	40080		0.30703	0	1	27961000	+		19929	15844	9657	9696	22984	22984					0.14803370942172478
LNVNRILRR	9	Unmodified	_LNVNRILRR_					0	0	0			REV__nc|ENSG00000204904|Q5VT33|LINC01545	REV__nc|ENSG00000204904|Q5VT33|LINC01545	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3681518435478	2	577.367456	1152.72036	2.4018	0.0013867	-1.5594	-0.00090034	0.8424	0.00048637	577.3665049446504	88.409	0.58199	88.409	88.119	88.701	0					69	18	5	0	0	0	0.85019	1	37013	37013		0.52476	0.066424	1	76654000	+		19930	14528	9658	9697	22985	22985					0.1501071574798516
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3575317263603	2	611.356754	1220.69895	2.1411	0.001309	-0.83373	-0.00050971	1.3073	0.00079925	611.3559752604883	77.193	1.4644	77.193	76.284	77.749	0					117	46	3	0	0	0	1.0366	2	31962	31962;32015		1.1933	0.59184	1	2596800			19931	4941	9659	9698	22986;22987	22986					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3564941287041	2	611.356754	1220.69895	2.1106	0.0012903	-1.9669	-0.0012025	0.14363	8.781E-05	611.3552112816064	78.111	0.78645	78.111	77.749	78.535	0					45	24	2	0	0	0	1.0366	1	32524	32524		1.1933	0.59184	1	1005400			19932	4941	9659	9698	22988	22988					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3577148318291	2	611.356754	1220.69895	2.1011	0.0012845	-1.2028	-0.00073536	0.89824	0.00054914	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	1.0366	3	32762	32762;32859;32912		1.1933	0.59184	1	6519600			19933	4941	9659	9698	22989;22990;22991	22989					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3572265505791	2	611.356754	1220.69895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.261	1	80.261	79.761	80.761	0								0	0	0	0.63775	1	33422	33422		1.1933	0.59184	1				19934	4941	9659	9698	22992	22992					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3572265505791	2	611.356754	1220.69895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.76	1	80.76	80.26	81.26	0								0	0	0	0.63775	1	33629	33629		1.1933	0.59184	1				19935	4941	9659	9698	22993	22993					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3576537966728	2	611.356754	1220.69895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.896	1	80.896	80.396	81.396	0								0	0	0	0.63775	1	33685	33685		1.1933	0.59184	1				19936	4941	9659	9698	22994	22994					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3560668826103	2	611.356754	1220.69895	1.9698	0.0012043	0.065133	3.9819E-05	2.035	0.0012441	611.3566402316326	77.022	2.1695	77.338	76.479	78.648	0.31653					134	68	3	0	0	0	1.0366	2	32546	32546;32613		1.1933	0.735	1	3044900			19937	4941	9659	9698	22995;22996	22995					0.09743285928607293
LNVRKAAHEAL	11	Unmodified	_LNVRKAAHEAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF;ENST00000560935.1_1_14:24652387-24652645:-|nuORF;ENST00000561379.1_1_14:24651787-24652670:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3550292849541	2	611.356754	1220.69895	1.6593	0.0010144	-0.21707	-0.00013271	1.4423	0.00088174	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	1.0366	5	32969	32969;33023;33076;33465;33637		1.1933	0.59184	1	10904000			19938	4941	9659	9698	22997;22998;22999;23000;23001	22997					0.09743285928607293
LNVRRLFPQ	9	Unmodified	_LNVRRLFPQ_					0	0	0		ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	ENSG00000176928|ENST00000652361|GCNT4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	572.4376098513603	2	571.843282	1141.67201	2.6363	0.0015075	-0.61302	-0.00035055	2.0232	0.001157	571.8431609864556	107.52	0.244	107.57	107.39	107.64	0.052452					14	11	2	0	0	0	0.11916	1	45988	45988		1.8442	0	1	15190000			19939	4423	9660	9699	23002	23002					0.10684222108079666
LNVSRKGR	8	Unmodified	_LNVSRKGR_					0	0	0		ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2864868044853	2	465.2856	928.556647	2.0151	0.00093758	0.10085	4.6925E-05	2.1159	0.0009845	465.285557881948	72.126	0.47221	72.126	71.892	72.364	0					34	14	4	0	0	0	0.89178	1	29990	29990		0.69038	0	1	8413400			19940	5910	9661	9700	23003	23003					0.08951117977096601
LNVSRKGR	8	Unmodified	_LNVSRKGR_					0	0	0		ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	ENST00000335500.8_1_17:42516078-42541999:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2870056033134	2	465.2856	928.556647	2.4546	0.0011421	0.19666	9.1505E-05	2.6512	0.0012336	465.2855822497386	71.918	0.53703	72.243	71.914	72.451	0.32494					47	16	4	0	0	0	0.89178	1	30023	30023		0.69038	0	1	9547400			19941	5910	9661	9700	23004	23004					0.08951117977096601
LNVVTGTL	8	Unmodified	_LNVVTGTL_					0	0	0			REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.7465698122978	2	408.744911	815.475269	1.8319	0.00074879	2.7149	0.0011097	4.5468	0.0018585	408.74591338901087	43.016	0.33027	44.937	44.751	45.081	1.9211					17	10	2	0	0	0	0.8909	1	18005	18005		2.0598	0	1	1920000	+		19942	10658	9662	9701	23005	23005					0.06014997494492036
LNVVTGTL	8	Unmodified	_LNVVTGTL_					0	0	0			REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	408.744911	815.475269	1.6669	0.00068132	4.3578	0.0017812	6.0246	0.0024625	408.74638556450475	43.643	0.30649	44.997	44.825	45.132	1.3536	0.029778	0.00060554	NaN	2.0598	22	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2401100	+		19943	10658	9662	9701							0.06014997494492036
LNVVTGTL	8	Unmodified	_LNVVTGTL_					0	0	0			REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	REV__ENST00000491390.1_1_1:160325502-160326610:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	408.744911	815.475269	1.8319	0.00074879	2.7149	0.0011097	4.5468	0.0018585	408.74591338901087	43.016	0.33027	44.937	44.751	45.081	1.9211	-0.029778	-0.00073748	NaN	2.0598	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1920000	+		19944	10658	9662	9701							0.06014997494492036
LNWIKLFKKL	10	Unmodified	_LNWIKLFKKL_					0	0	0		tr|A0A7D6ZE96|A0A7D6ZE96_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12805PE=4SV=1	tr|A0A7D6ZE96|A0A7D6ZE96_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12805PE=4SV=1	tr|A0A7D6ZE96|A0A7D6ZE96_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.9499694705009	3	434.948064	1301.82236	3.3399	0.0014527	1.1044	0.00048034	4.4442	0.001933	434.94844648101446	93.254	0.41289	94.531	94.323	94.736	1.277					23	12	3	0	0	0	0.89803	1	39219	39219		0.15932	0	1	4470400			19945	17051	9663	9702	23006	23006					0.18352569047033285
LNYRIEEQMNK	11	Unmodified	_LNYRIEEQMNK_					0	0	0		tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.9095336794853	3	479.910009	1436.7082	1.4081	0.00067574	-2.2265	-0.0010685	-0.81844	-0.00039278	479.90862905082463	27.138	0.36692	27.138	26.922	27.289	0					24	11	3	0	0	0	0.98969	1	11321	11321		4.4062	0.28952	1	2094900			19946	16709	9664	9703	23007	23007					0.007312664319670148
LNYRIEEQMNK	11	Unmodified	_LNYRIEEQMNK_					0	0	0		tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	479.910009	1436.7082	1.7511	0.00084036	-3.7325	-0.0017913	-1.9815	-0.00095092	479.90796726156185	26.588	0.21394	26.85	26.712	26.926	0.26173	-0.032331	-0.0016846	NaN	4.4062	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1153800			19947	16709	9664	9703							0.007312664319670148
LNYRIEEQMNK	11	Unmodified	_LNYRIEEQMNK_					0	0	0		tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	tr|A0A7D6VLZ3|A0A7D6VLZ3_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13340PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	479.910009	1436.7082	1.4211	0.000682	-2.1071	-0.0010112	-0.68599	-0.00032921	479.908885629826	25.399	0.24386	26.659	26.527	26.771	1.2594	-0.22352	0.00065558	NaN	4.4062	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	462520			19948	16709	9664	9703							0.007312664319670148
LNYTVCALVV	10	Unmodified	_LNYTVCALVV_					0	0	0			REV__tr|A0A7D6ZEL0|A0A7D6ZEL0_9CLOTFprAfamilyA-typeflavoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14110PE=3SV=1	REV__tr|A0A7D6ZEL0|A0A7D6ZEL0_9CLOTFprAfamilyA-typeflavoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14110PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.2617065310478	2	547.79936	1093.58417	1.7423	0.00095441	-3.5276	-0.0019324	-1.7854	-0.00097802	547.7970433109704	45.072	0.28061	47.032	46.896	47.176	1.9596					18	8	3	0	0	0	0.12437	1	18943	18943		18.146	5.6148	1	1154200	+		19949	15622	9665	9704	23008	23008					0.04111840402447342
LPAAAGVFR	9	Unmodified	_LPAAAGVFR_					0	0	0		chr19:56176062-56177070|171|13.41|0.06|7.78|+|1|GALP,GALP|1	chr19:56176062-56177070|171|13.41|0.06|7.78|+|1|GALP,GALP|1	chr19:56176062-56177070|171|13.41|0.06|7.78|+|1|GALP,GALP|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1804077029228	3	301.179989	900.518136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.73	104.23	105.23	0.056801								0	0	0	0.42693	1	44197	44197		1.1933	0.735	1				19950	235	9666	9705	23009	23009					0.06389812342558798
LPAEFFEVL	9	Unmodified	_LPAEFFEVL_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1064.566455066204	1	1064.56627	1063.559	5.2711	0.0056114	-3.9831	-0.0042403	1.288	0.0013711	1064.5622909524884	90.045	0.34782	91.065	90.926	91.274	1.0199					21	10	3	0	0	0	0.028763	1	37951	37951		89.427	41.081	1	5399900			19951	2517	9667	9706	23010	23010					0.02976108871530414
LPAEFFEVL	9	Unmodified	_LPAEFFEVL_					0	0	0		ENSG00000132182|ENST00000254508|NUP210;nc|ENSG00000132182|Q8TEM1-2|NUP210	ENSG00000132182|ENST00000254508|NUP210	ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7894775271416	2	532.786776	1063.559	4.742	0.0025265	2.1344	0.0011372	6.8763	0.0036636	532.7874300251713	89.987	0.44534	91.006	90.894	91.34	1.0199					33	13	4	0	0	0	0.11478	1	37989	37989		44.407	22.66	1	3224300			19952	2517	9667	9706	23011	23011					0.02976108871530414
LPAERRGP	8	Unmodified	_LPAERRGP_					0	0	0		ENST00000564556.1_1_16:2048515-2049688:-|nuORF	ENST00000564556.1_1_16:2048515-2049688:-|nuORF	ENST00000564556.1_1_16:2048515-2049688:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2573730349541	2	448.259051	894.503549	1.4591	0.00065405	-2.5184	-0.0011289	-1.0593	-0.00047485	448.2573655473106	68.627	0.44054	68.627	68.39	68.83	0					16	13	2	0	0	0	0.8909	1	28575	28575		2.0598	1.2661	1	768880			19953	7348	9668	9707	23012	23012					0.05207740194430244
LPAGIVAVL	9	Unmodified	_LPAGIVAVL_					0	0	0		ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant;nc|ENSG00000122882|O95905-2|ECD;ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-3|ECD	ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant	ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	852.5580932497978	1	852.555316	851.54804	2.8164	0.0024012	-0.80761	-0.00068853	2.0088	0.0017126	852.5541703198862	74.977	0.37672	76.283	76.028	76.404	1.3063					17	11	2	0	0	0	0.08022	1	31480	31480		56.048	10.298	1	1599300			19954	437	9669	9708	23013	23013					0.11632751287891097
LPAGIVAVL	9	Unmodified	_LPAGIVAVL_					0	0	0		ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant;nc|ENSG00000122882|O95905-2|ECD;ENSG00000122882|ENST00000372979|ECD;nc|ENSG00000122882|O95905-3|ECD	ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant	ECD|p.E435Rfs*15|1|0.32|ENSG00000122882|chr10:73139427-73139428|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	852.5567504763603	1	852.555316	851.54804	2.7328	0.0023299	-1.9205	-0.0016373	0.81235	0.00069257	852.555073292814	74.505	0.28937	76.301	76.114	76.403	1.7962					13	8	2	0	0	0	0.16975	1	31286	31286		36.466	8.2929	1	1168200			19955	437	9669	9708	23014	23014					0.11632751287891097
LPAHIPYQEL	10	Unmodified	_LPAHIPYQEL_					0	0	0		nc|ENSG00000128487|Q5M775-4|SPECC1;ENSG00000128487|ENST00000395527|SPECC1;ENSG00000100014|ENST00000314328|SPECC1L	nc|ENSG00000128487|Q5M775-4|SPECC1	nc|ENSG00000128487|Q5M775-4|SPECC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8219482302666	2	590.821681	1179.62881	2.5797	0.0015242	-0.76887	-0.00045426	1.8108	0.0010699	590.8206274217953	45.079	0.57036	46.445	45.993	46.563	1.3653					37	17	3	0	0	0	0.047799	2	18898	18859;18898		85.272	50.87	1	3819300			19956	1227	9670	9709	23015;23016	23016					0.046179875401321624
LPAHIPYQEL	10	Unmodified	_LPAHIPYQEL_					0	0	0		nc|ENSG00000128487|Q5M775-4|SPECC1;ENSG00000128487|ENST00000395527|SPECC1;ENSG00000100014|ENST00000314328|SPECC1L	nc|ENSG00000128487|Q5M775-4|SPECC1	nc|ENSG00000128487|Q5M775-4|SPECC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8239623904228	2	590.821681	1179.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.208	1	46.573	46.073	47.073	1.3653								0	0	0	0.41661	1	18943	18943		28.487	12.338	1				19957	1227	9670	9709	23017	23017					0.046179875401321624
LPAHIPYQEL	10	Unmodified	_LPAHIPYQEL_					0	0	0		nc|ENSG00000128487|Q5M775-4|SPECC1;ENSG00000128487|ENST00000395527|SPECC1;ENSG00000100014|ENST00000314328|SPECC1L	nc|ENSG00000128487|Q5M775-4|SPECC1	nc|ENSG00000128487|Q5M775-4|SPECC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8225585818291	2	590.821681	1179.62881	2.1524	0.0012717	-0.80858	-0.00047773	1.3438	0.00079393	590.8207458560631	44.506	0.63374	46.465	46.005	46.639	1.9596					44	19	4	0	0	0	0.052963	3	18658	18612;18658;18714		88.954	58.317	1	3075000			19958	1227	9670	9709	23018;23019;23020	23019					0.046179875401321624
LPAKGLSLVP	10	Unmodified	_LPAKGLSLVP_					0	0	0			REV__ENST00000525137.1_2_11:71146423-71148912:-|nuORF	REV__ENST00000525137.1_2_11:71146423-71148912:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.8193847537041	2	497.81841	993.622267	1.0003	0.00049798	-0.8955	-0.0004458	0.10482	5.2183E-05	497.8181446870266	107.69	0.18419	107.69	107.6	107.79	0					29	9	4	0	0	0	0.88314	1	46218	46218		3.2813	1.2216	1	83559000	+		19959	13657	9671	9710	23021	23021					0.12520094379419788
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant;nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3226196169853	2	515.320786	1028.62702	3.3459	0.0017242	0.61586	0.00031737	3.9618	0.0020416	515.3213042662393	61.191	0.33699	62.611	62.409	62.746	1.4196					21	10	3	0	0	0	0.060242	2	25669	25618;25669		63.961	23.32	1	3002100			19960	2173	9672	9711	23022;23023	23023					0.11384978522164602
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant;nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3224975466728	2	515.320786	1028.62702	3.6051	0.0018578	0.059037	3.0423E-05	3.6641	0.0018882	515.3207917790342	60.59	0.34265	62.555	62.387	62.729	1.9653					24	10	3	0	0	0	0.075994	2	25406	25406;25456		57.722	27.085	1	2228000			19961	2173	9672	9711	23024;23025	23024					0.11384978522164602
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant;nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	515.320786	1028.62702	2.3833	0.0012282	0.16709	8.6104E-05	2.5504	0.0013143	515.3210723565105	62.412	0.21713	62.412	62.305	62.522	0	-0.031738	-0.00019605	NaN	63.961	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	378770			19962	2173	9672	9711							0.11384978522164602
LPAKILVEF	9	Unmodified	_LPAKILVEF_					0	0	0		ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant;nc|ENSG00000122952|O95229-2|ZWINT;ENSG00000122952|ENST00000373944|ZWINT	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	ZWINT|p.R175Gfs*21|1|0.05|ENSG00000122952|chr10:56358905-56358905|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	515.320786	1028.62702	2.1161	0.0010905	1.4745	0.00075983	3.5906	0.0018503	515.8226107370087	61.868	0.24866	62.198	62.041	62.29	0.32974	-0.24626	0.0011514	NaN	63.961	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494830			19963	2173	9672	9711							0.11384978522164602
LPALCAWLL	9	Unmodified	_LPALCAWLL_					0	0	0		ENST00000261497.8_1_17:20905229-20905559:-|nuORF	ENST00000261497.8_1_17:20905229-20905559:-|nuORF	ENST00000261497.8_1_17:20905229-20905559:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2913390994072	2	500.288431	998.562309	0.79961	0.00040004	2.9664	0.0014841	3.766	0.0018841	500.2894723103207	30.724	0.30984	32.006	31.811	32.121	1.2825					20	9	3	0	0	0	0.24585	1	12854	12854		28.173	2.7739	1	1297300			19964	5625	9673	9712	23026	23026					0.06297080444539915
LPALISGPV	9	Unmodified	_LPALISGPV_					0	0	0			REV__ENST00000459915.2_1_3:124356033-124393462:+|nuORF	REV__ENST00000459915.2_1_3:124356033-124393462:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.7729369997978	2	433.770929	865.527304	2.6645	0.0011558	3.1777	0.0013784	5.8422	0.0025342	433.772206971017	62.817	0.65034	64.761	64.315	64.965	1.9444					54	20	3	0	0	0	0.77526	1	26340	26340		4.3292	0	1	2957700	+		19965	10589	9674	9713	23027	23027					0.08916160908233906
LPANVGGQIL	10	Unmodified	_LPANVGGQIL_					0	0	0		nc|ENSG00000063169|Q9NZM4-2|BICRA;ENSG00000063169|ENST00000594866|BICRA	nc|ENSG00000063169|Q9NZM4-2|BICRA	nc|ENSG00000063169|Q9NZM4-2|BICRA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2932311892509	2	491.290017	980.565481	0.41981	0.00020625	3.1131	0.0015295	3.5329	0.0017357	491.29200313982835	50.697	0.42757	52.673	52.454	52.882	1.9753					20	13	2	0	0	0	0.17319	1	21280	21280		52.268	1.4133	1	1048200			19966	760	9675	9714	23028	23028					0.07442046822916382
LPARTKGAAGA	11	Unmodified	_LPARTKGAAGA_					0	0	0			REV__ENST00000608395.1_1_3:151987222-151987342:-|nuORF	REV__ENST00000608395.1_1_3:151987222-151987342:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1012.593188464642	1	1012.5898	1011.58253	1.7553	0.0017774	3.911	0.0039602	5.6663	0.0057376	1012.5954605625456	73.075	0.40842	73.075	72.872	73.28	0					27	12	3	0	0	0	0.88318	1	30485	30485		10.824	0	1	2719200	+		19967	14149	9676	9715	23029	23029					0.0771996742871579
LPAVEHPLL	9	Unmodified	_LPAVEHPLL_					0	0	0			REV__ENSG00000123095|ENST00000242728|BHLHE41	REV__ENSG00000123095|ENST00000242728|BHLHE41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7874633669853	2	494.794935	987.575317	1.6297	0.00080635	0.58493	0.00028942	2.2146	0.0010958	494.7952085614246	46.094	0.62752	47.469	47.085	47.712	1.3751					62	19	5	0	0	0	0.46905	1	19204	19204		16.942	1.0951	1	36501000	+		19968	9615	9677	9716	23030	23030					0.08103234828286077
LPAWQPLL	8	Unmodified	_LPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.2797424197197	2	469.278921	936.543289	2.7361	0.001284	-0.25623	-0.00012024	2.4799	0.0011638	469.27871171372004	76.548	0.43763	77.842	77.607	78.045	1.2938					22	13	2	0	0	0	0.35843	2	32121	32121;32171		63.394	0	1	2713600			19969	4597	9678	9717	23031;23032	23031					0.07247867145144937
LPAWQPLL	8	Unmodified	_LPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2797119021416	2	469.278921	936.543289	3.0883	0.0014493	-0.88536	-0.00041548	2.2029	0.0010338	469.2786512511315	76.026	0.43444	77.793	77.537	77.972	1.7672					24	13	3	0	0	0	0.38877	1	31866	31866		56.048	0	1	1736700			19970	4597	9678	9717	23033	23033					0.07247867145144937
LPCCSCCSK	9	Unmodified	_LPCCSCCSK_					0	0	0			REV__ENSG00000244020|ENST00000464121|MT1HL1	REV__ENSG00000244020|ENST00000464121|MT1HL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1236755251884	3	315.12166	942.34315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.51	105.01	106.01	0.15859								0	0	0	0.42693	1	44854	44854		0.26902	0.26902	1		+		19971	11814	9679	9718	23034	23034					-0.13032758172300873
LPDCDGHC	8	Unmodified	_LPDCDGHC_					0	0	0			REV__chr8:54051146-54055060|107|16.25|0.29|5.79|-|0|LYPLA1,LYPLA1|1	REV__chr8:54051146-54055060|107|16.25|0.29|5.79|-|0|LYPLA1,LYPLA1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3136474490166	1	859.3073	858.300023	3.4226	0.002941	1.672	0.0014368	5.0946	0.0043778	859.3121746501016	98.285	0.1756	98.512	98.409	98.585	0.22776					11	5	3	0	0	0	0.89008	1	41366	41366		2.5775	0	1	19038000	+		19972	8347	9680	9719	23035	23035					-0.13479488633720393
LPDERTISL	9	Unmodified	_LPDERTISL_					0	0	0		ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2930175662041	2	522.290214	1042.56587	1.769	0.00092393	2.0732	0.0010828	3.8422	0.0020068	522.2913323379985	38.49	0.34307	39.786	39.6	39.943	1.2961					22	11	3	0	0	0	0.046715	1	16143	16143		70.332	3.8753	1	3568200			19973	1323	9681	9720	23036	23036					0.046294217521108294
LPDERTISL	9	Unmodified	_LPDERTISL_					0	0	0		ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	522.290214	1042.56587	0.78998	0.0004126	5.729	0.0029922	6.519	0.0034048	522.2941521624426	37.869	0.26931	39.689	39.579	39.848	1.8202	-0.048652	0.0026624	NaN	70.332	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3140300			19974	1323	9681	9720							0.046294217521108294
LPDFGGNVL	9	Unmodified	_LPDFGGNVL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	931.4874145388603	1	931.488359	930.481082	2.7328	0.0025455	-0.93816	-0.00087388	1.7946	0.0016717	931.4869439034429	63.978	0.32037	65.385	65.24	65.56	1.4071					22	9	3	0	0	0	0.044893	1	26827	26827		71.922	15.745	1	2459400			19975	3208	9682	9721	23037	23037					0.013060960061579863
LPDFGGNVL	9	Unmodified	_LPDFGGNVL_					0	0	0		nc|ENSG00000148396|O15027-2|SEC16A;nc|ENSG00000148396|O15027-4|SEC16A;nc|ENSG00000148396|O15027-3|SEC16A;ENSG00000148396|ENST00000684901|SEC16A;nc|ENSG00000148396|O15027-5|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	nc|ENSG00000148396|O15027-2|SEC16A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	931.4839965701103	1	931.488359	930.481082	2.8254	0.0026318	-0.62325	-0.00058055	2.2021	0.0020512	931.4879808218315	63.48	0.28813	65.425	65.279	65.567	1.9444					18	8	3	0	0	0	0.044893	1	26620	26620		71.922	6.6873	1	1445400			19976	3208	9682	9721	23038	23038					0.013060960061579863
LPDFINGGLL	10	Unmodified	_LPDFINGGLL_					0	0	0			REV__ENSG00000146834|ENST00000310512|MEPCE	REV__ENSG00000146834|ENST00000310512|MEPCE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	529.3375121951103	2	529.797675	1057.5808	2.9058	0.0015395	3.897	0.0020646	6.8028	0.0036041	529.8010157481344	75.217	0.34376	76.998	76.822	77.166	1.7817					21	10	3	0	0	0	0.12461	1	31477	31477		14.838	2.3067	1	1097700	+		19977	10314	9683	9722	23039	23039					0.054309136201027286
LPDFINGGLL	10	Unmodified	_LPDFINGGLL_					0	0	0			REV__ENSG00000146834|ENST00000310512|MEPCE	REV__ENSG00000146834|ENST00000310512|MEPCE	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	529.797675	1057.5808	2.456	0.0013012	4.8432	0.0025659	7.2992	0.0038671	529.8017328077592	75.634	0.37321	76.94	76.799	77.172	1.3063	-0.050653	0.00081337	NaN	14.838	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1704500	+		19978	10314	9683	9722							0.054309136201027286
LPDGQVITI	9	Unmodified	_LPDGQVITI_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000196604|ENST00000409914|POTEF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000397487.3_1_2:132383579-132384836:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	955.5471679568291	1	955.545874	954.538597	-0.13228	-0.0001264	1.1822	0.0011297	1.0499	0.0010033	955.5470547450788	56.386	0.53904	57.8	57.584	58.123	1.4145					42	17	3	0	0	0	0.0069529	4	23671	23571;23621;23671;23713		114.65	22.158	1	11689000			19979	937	9684	9723	23040;23041;23042;23043	23042					0.0595093821170849
LPDGQVITI	9	Unmodified	_LPDGQVITI_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000196604|ENST00000409914|POTEF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000397487.3_1_2:132383579-132384836:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2768127322197	2	478.276575	954.538597	0.7639	0.00036536	0.43448	0.0002078	1.1984	0.00057316	478.27675990875326	56.361	0.59652	57.772	57.552	58.149	1.4109					49	19	4	0	0	0	0.026836	1	23618	23618		92.491	3.5878	1	22073000			19980	937	9684	9723	23044	23044					0.0595093821170849
LPDGQVITI	9	Unmodified	_LPDGQVITI_					0	0	0		ENSG00000184009|ENST00000573283|ACTG1;ENSG00000075624|ENST00000646664|ACTB;ENSG00000163017|ENST00000345517|ACTG2;ENST00000493945.5_1_7:5567882-5569288:-|nuORF;ENST00000576209.5_1_17:79477718-79479174:-|nuORF;ENST00000576917.5_1_17:79478157-79479765:-|nuORF;ENSG00000159251|ENST00000290378|ACTC1;ENSG00000143632|ENST00000366684|ACTA1;ENSG00000107796|ENST00000224784|ACTA2;ENST00000462494.5_1_7:5567381-5568494:-|nuORF;ENST00000574671.5_1_17:79477718-79478688:-|nuORF;nc|ENSG00000163017|P63267-2|ACTG2;ENSG00000169067|ENST00000423391|ACTBL2;ENSG00000196604|ENST00000409914|POTEF;ENSG00000222038|ENST00000409602|POTEJ;ENSG00000188219|ENST00000683005|POTEE;ENSG00000196834|ENST00000451531|POTEI;ENST00000486001.1_1_1:27651822-27652284:+|nuORF;nc|ENSG00000204434|Q9BYX7|POTEKP;ENST00000397487.3_1_2:132383579-132384836:+|nuORF	ENSG00000184009|ENST00000573283|ACTG1	ENSG00000184009|ENST00000573283|ACTG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	955.5436889529228	1	955.545874	954.538597	1.1127	0.0010632	-0.95268	-0.00091032	0.16001	0.0001529	955.5453961645296	55.857	0.49844	57.825	57.618	58.117	1.9684					39	16	3	0	0	0	0.024001	4	23368	23368;23415;23467;23521		96.111	21.182	1	11932000			19981	937	9684	9723	23045;23046;23047;23048	23045					0.0595093821170849
LPDHINIVL	9	Unmodified	_LPDHINIVL_					0	0	0		nc|ENSG00000120526|Q96RS6-3|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;ENSG00000120526|ENST00000239690|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3073608279228	2	517.305667	1032.59678	2.7073	0.0014005	1.326	0.00068593	4.0333	0.0020865	517.3060480052046	60.02	0.48066	61.439	61.146	61.626	1.4196					39	15	4	0	0	0	0.17276	1	25171	25171		36.127	2.0246	1	19353000			19982	2107	9685	9724	23049	23049					0.08178619856971636
LPDHINIVL	9	Unmodified	_LPDHINIVL_					0	0	0		nc|ENSG00000120526|Q96RS6-3|NUDCD1;ENST00000519607.5_1_8:110255240-110326067:-|nuORF;nc|ENSG00000120526|Q96RS6-2|NUDCD1;ENSG00000120526|ENST00000239690|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	nc|ENSG00000120526|Q96RS6-3|NUDCD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3076660037041	2	517.305667	1032.59678	2.937	0.0015193	0.72093	0.00037294	3.6579	0.0018923	517.3057215706264	59.521	0.4458	61.49	61.225	61.671	1.969					41	14	4	0	0	0	0.11643	1	24988	24988		43.858	3.901	1	19015000			19983	2107	9685	9724	23050	23050					0.08178619856971636
LPDIKVLTL	9	Unmodified	_LPDIKVLTL_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3273803591728	2	506.326068	1010.63758	2.1288	0.0010779	-0.33928	-0.00017179	1.7896	0.0009061	506.3258851542832	67.459	0.43219	68.837	68.603	69.035	1.3778					30	13	3	0	0	0	0.014446	1	28303	28303		103.82	17.492	1	5899600			19984	1906	9686	9725	23051	23051					0.13268961176606808
LPDIKVLTL	9	Unmodified	_LPDIKVLTL_					0	0	0		ENST00000472077.1_1_2:27604468-27607956:-|nuORF;ENSG00000115241|ENST00000344034|PPM1G	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	ENST00000472077.1_1_2:27604468-27607956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3267089724541	2	506.326068	1010.63758	1.3213	0.00066903	0.22232	0.00011257	1.5437	0.0007816	506.32611742377696	66.986	0.37221	68.875	68.646	69.018	1.8889					30	11	4	0	0	0	0.018305	1	28094	28094		100.71	22.559	1	5357100			19985	1906	9686	9725	23052	23052					0.13268961176606808
LPDINIYQL	9	Unmodified	_LPDINIYQL_					0	0	0		KIF26B-SMYD3|3|fusion;ENST00000366516.5_1_1:245912867-246093251:-|nuORF;nc|ENSG00000185420|Q9H7B4-2|SMYD3;ENST00000366517.5_1_1:245912867-246116553:-|nuORF;KIF26B-SMYD3|4|fusion;nc|ENSG00000185420|Q9H7B4-3|SMYD3;KIF26B-SMYD3|1|fusion;ENSG00000185420|ENST00000490107|SMYD3;SLC25A32-SMYD3|1|fusion;KIF26B-SMYD3|2|fusion;SLC25A32-SMYD3|2|fusion	KIF26B-SMYD3|3|fusion	KIF26B-SMYD3|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8041259646416	2	544.802957	1087.59136	1.1695	0.00063713	-0.86693	-0.0004723	0.30253	0.00016482	544.8032508085288	77.519	0.30633	79.271	79.073	79.379	1.7514					24	9	4	0	0	0	0.12251	1	32507	32507		41.84	5.7126	1	2359600			19986	7667	9687	9726	23053	23053					0.05106896274514838
LPDINIYQL	9	Unmodified	_LPDINIYQL_					0	0	0		KIF26B-SMYD3|3|fusion;ENST00000366516.5_1_1:245912867-246093251:-|nuORF;nc|ENSG00000185420|Q9H7B4-2|SMYD3;ENST00000366517.5_1_1:245912867-246116553:-|nuORF;KIF26B-SMYD3|4|fusion;nc|ENSG00000185420|Q9H7B4-3|SMYD3;KIF26B-SMYD3|1|fusion;ENSG00000185420|ENST00000490107|SMYD3;SLC25A32-SMYD3|1|fusion;KIF26B-SMYD3|2|fusion;SLC25A32-SMYD3|2|fusion	KIF26B-SMYD3|3|fusion	KIF26B-SMYD3|3|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	544.802957	1087.59136	2.39	0.0013021	0.4263	0.00023225	2.8163	0.0015343	544.8030192798996	77.994	0.3583	79.275	79.077	79.435	1.2809	0.0023393	0.00085201	NaN	41.84	29	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1669300			19987	7667	9687	9726							0.05106896274514838
LPDKFQFEL	9	Unmodified	_LPDKFQFEL_					0	0	0		nc|ENSG00000065989|P27815-4|PDE4A;nc|ENSG00000065989|P27815-3|PDE4A;nc|ENSG00000065989|P27815-6|PDE4A;DNM2-PDE4A|1|fusion;nc|ENSG00000065989|P27815-2|PDE4A;nc|ENSG00000065989|P27815-7|PDE4A;ENSG00000065989|ENST00000380702|PDE4A	nc|ENSG00000065989|P27815-4|PDE4A	nc|ENSG00000065989|P27815-4|PDE4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8081542849541	2	568.802957	1135.59136	0.88972	0.00050607	3.8019	0.0021626	4.6917	0.0026686	568.8054916250611	51.65	0.22422	53.047	52.87	53.095	1.3966					12	7	2	0	0	0	0.20671	1	21598	21598		32.305	0	1	6451100			19988	424	9688	9727	23054	23054					0.028988962745188473
LPDKTLIDL	9	Unmodified	_LPDKTLIDL_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3057128787041	2	514.305332	1026.59611	1.1457	0.00058924	-0.30103	-0.00015482	0.84468	0.00043442	514.3050226922186	52.678	0.63393	54.075	53.836	54.469	1.3966					53	19	3	0	0	0	0.025926	2	22029	22029;22118		93.938	15.531	1	12139000			19989	2165	9689	9728	23055;23056	23055					0.08387780417297108
LPDKTLIDL	9	Unmodified	_LPDKTLIDL_					0	0	0		ENST00000379752.5_1_1:157030233-157030518:-|nuORF;ENSG00000122692|ENST00000397149|SMU1	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	ENST00000379752.5_1_1:157030233-157030518:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3068115115166	2	514.305332	1026.59611	1.6981	0.00087335	-0.55969	-0.00028785	1.1384	0.0005855	514.3048351050063	52.143	0.6813	54.115	53.831	54.512	1.9722					47	21	3	0	0	0	0.025926	4	21821	21774;21821;21867;21904		93.938	22.016	1	10078000			19990	2165	9689	9728	23057;23058;23059;23060	23058					0.08387780417297108
LPDLSRPPD	9	Unmodified	_LPDLSRPPD_					0	0	0		nc|ENSG00000071564|P15923-2|TCF3;ENSG00000071564|ENST00000262965|TCF3;nc|ENSG00000071564|P15923-3|TCF3	nc|ENSG00000071564|P15923-2|TCF3	nc|ENSG00000071564|P15923-2|TCF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1009.533007800579	1	1009.53129	1008.52401	1.2308	0.0012426	-0.79826	-0.00080587	0.43259	0.00043671	1009.5299323929806	101.24	0.13736	101.24	101.15	101.29	0					6	4	2	0	0	0	0.66839	1	42398	42398		8.5933	0.68312	1	8398400			19991	871	9690	9729	23061	23061					0.020088660635678934
LPDNDTFYDL	10	Unmodified	_LPDNDTFYDL_					0	0	0		nc|ENSG00000159403|P00736|C1R;ENSG00000159403|ENST00000647956|C1R	nc|ENSG00000159403|P00736|C1R	nc|ENSG00000159403|P00736|C1R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	606.8200561404228	2	606.774593	1211.53463	2.3001	0.0013957	-0.6378	-0.000387	1.6623	0.0010087	606.7740516538167	71.247	0.29887	72.589	72.42	72.719	1.3415					16	9	2	0	0	0	0.12412	1	29879	29879		10.074	0.6908	1	626470			19992	3527	9691	9730	23062	23062					-0.06267196072667502
LPDNDTFYDL	10	Unmodified	_LPDNDTFYDL_					0	0	0		nc|ENSG00000159403|P00736|C1R;ENSG00000159403|ENST00000647956|C1R	nc|ENSG00000159403|P00736|C1R	nc|ENSG00000159403|P00736|C1R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	606.8194457888603	2	606.774593	1211.53463	0.91047	0.00055245	1.3992	0.00084901	2.3097	0.0014015	606.7752844038309	70.78	0.26891	72.618	72.503	72.772	1.8378					16	8	2	0	0	0	0.12412	1	29711	29711		10.074	4.3421	1	651900			19993	3527	9691	9730	23063	23063					-0.06267196072667502
LPDNSILVV	9	Unmodified	_LPDNSILVV_					0	0	0		ENST00000525880.5_1_19:15226885-15228740:-|nuORF;ENST00000524779.5_1_19:15226645-15228740:-|nuORF;ENST00000534806.1_1_19:15226885-15227589:-|nuORF;ENST00000533086.5_1_19:15226645-15227634:-|nuORF;ENSG00000105135|ENST00000263383|ILVBL	ENST00000525880.5_1_19:15226885-15228740:-|nuORF	ENST00000525880.5_1_19:15226885-15228740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.5631591677666	1	969.561524	968.554247	1.7874	0.001733	0.92596	0.00089777	2.7133	0.0026307	969.5621861820376	63.751	0.56987	65.158	64.958	65.528	1.4071					36	17	3	0	0	0	0.026836	2	26724	26724;26773		92.491	17.562	1	3113100			19994	1497	9692	9731	23064;23065	23064					0.06871224728774905
LPDNSILVV	9	Unmodified	_LPDNSILVV_					0	0	0		ENST00000525880.5_1_19:15226885-15228740:-|nuORF;ENST00000524779.5_1_19:15226645-15228740:-|nuORF;ENST00000534806.1_1_19:15226885-15227589:-|nuORF;ENST00000533086.5_1_19:15226645-15227634:-|nuORF;ENSG00000105135|ENST00000263383|ILVBL	ENST00000525880.5_1_19:15226885-15228740:-|nuORF	ENST00000525880.5_1_19:15226885-15228740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	969.5648071169853	1	969.561524	968.554247	2.2121	0.0021448	0.071576	6.9397E-05	2.2837	0.0022142	969.5615386127653	63.227	0.53996	65.172	64.965	65.505	1.9444					34	16	3	0	0	0	0.026836	2	26526	26526;26578		92.491	27.256	1	2487800			19995	1497	9692	9731	23066;23067	23066					0.06871224728774905
LPDPIIIHL	9	Unmodified	_LPDPIIIHL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.8198730349541	2	515.81841	1029.62227	2.4763	0.0012773	-0.056766	-2.9281E-05	2.4196	0.0012481	515.8181215805574	71.302	0.60278	72.643	72.364	72.967	1.3415					51	19	4	0	0	0	0.0017386	3	29917	29867;29917;29968		131.3	77.722	1	12643000			19996	2540	9693	9732	23068;23069;23070	23069					0.10864094379417111
LPDPIIIHL	9	Unmodified	_LPDPIIIHL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8196899294853	2	515.81841	1029.62227	1.1922	0.00061494	0.93858	0.00048414	2.1307	0.0010991	515.8185395554206	70.837	0.57509	72.674	72.349	72.924	1.8378					49	18	4	0	0	0	0.0017386	4	29690	29645;29690;29729;29772		131.3	67.735	1	11766000			19997	2540	9693	9732	23071;23072;23073;23074	23072					0.10864094379417111
LPDQVLRVF	9	Unmodified	_LPDQVLRVF_					0	0	0		nc|ENSG00000109756|Q9Y4G8|RAPGEF2;ENSG00000109756|ENST00000691494|RAPGEF2	nc|ENSG00000109756|Q9Y4G8|RAPGEF2	nc|ENSG00000109756|Q9Y4G8|RAPGEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8195678591728	2	543.818941	1085.62333	1.541	0.00083801	-0.85539	-0.00046518	0.68559	0.00037283	543.8184974789626	54.81	0.48502	56.215	55.931	56.416	1.4048					37	15	3	0	0	0	0.019486	1	22945	22945		99.755	0	1	11163000			19998	1677	9694	9733	23075	23075					0.08394308748324875
LPDQVLRVF	9	Unmodified	_LPDQVLRVF_					0	0	0		nc|ENSG00000109756|Q9Y4G8|RAPGEF2;ENSG00000109756|ENST00000691494|RAPGEF2	nc|ENSG00000109756|Q9Y4G8|RAPGEF2	nc|ENSG00000109756|Q9Y4G8|RAPGEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8195678591728	2	543.818941	1085.62333	2.0278	0.0011027	-1.1019	-0.00059924	0.92587	0.00050351	543.81832620872	54.303	0.40245	56.272	56.064	56.467	1.9684					30	12	3	0	0	0	0.0070725	3	22762	22715;22762;22801		114.2	0	1	9762000			19999	1677	9694	9733	23076;23077;23078	23077					0.08394308748324875
LPDRRGLYL	9	Unmodified	_LPDRRGLYL_					0	0	0		ENST00000400188.7_1_15:26866640-26874217:-|nuORF	ENST00000400188.7_1_15:26866640-26874217:-|nuORF	ENST00000400188.7_1_15:26866640-26874217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	368.5510436892509	3	368.217102	1101.62948	-0.79045	-0.00029106	0.04304	1.5848E-05	-0.74741	-0.00027521	368.21721853077713	36.22	0.5864	37.497	37.15	37.736	1.2762					56	34	3	0	0	0	0.42097	1	15234	15234		19.362	0	1	2880900			20000	6340	9695	9734	23079	23079					0.08272826979850834
LPDRRSRSF	9	Unmodified	_LPDRRSRSF_					0	0	0		ENST00000456859.2_1_12:57066766-57082127:-|nuORF	ENST00000456859.2_1_12:57066766-57082127:-|nuORF	ENST00000456859.2_1_12:57066766-57082127:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3094970583916	2	567.312346	1132.61014	0.67301	0.00038181	2.9494	0.0016732	3.6224	0.002055	567.8161646624847	55.022	0.49466	56.991	56.61	57.105	1.9684					38	16	3	0	0	0	0.27148	1	22978	22978		26.884	4.1474	1	3311000			20001	6644	9696	9735	23080	23080					0.049138706889380046
LPDRTGEVI	9	Unmodified	_LPDRTGEVI_					0	0	0			REV__ENSG00000109452|ENST00000262992|INPP4B	REV__ENSG00000109452|ENST00000262992|INPP4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2752868533134	2	500.277106	998.53966	0.47249	0.00023637	-0.8208	-0.00041063	-0.34831	-0.00017425	500.27629030512855	26.705	0.21847	28.452	28.369	28.587	1.747					13	7	2	0	0	0	0.24063	1	11186	11186		28.487	0	1	1091200	+		20002	9272	9697	9736	23081	23081					0.04033152580609567
LPDVSLQEF	9	Unmodified	_LPDVSLQEF_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2734252810478	2	524.27149	1046.52843	1.9953	0.0010461	1.8282	0.00095848	3.8235	0.0020045	524.2725686581532	66.458	0.4006	67.847	67.689	68.089	1.3888					23	12	2	0	0	0	0.033504	1	27892	27892		81.89	33.544	1	2583700			20003	1411	9698	9737	23082	23082					0.007023304865015234
LPDVSLQEF	9	Unmodified	_LPDVSLQEF_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2725097537041	2	524.27149	1046.52843	1.7369	0.0009106	1.397	0.00073243	3.1339	0.001643	524.2721397356546	66.07	0.40306	67.971	67.791	68.194	1.9006					22	12	2	0	0	0	0.063746	1	27718	27718		62.573	33.491	1	1632900			20004	1411	9698	9737	23083	23083					0.007023304865015234
LPEAFPITL	9	Unmodified	_LPEAFPITL_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7906677126884	2	500.789318	999.564084	2.637	0.0013206	-0.12725	-6.3723E-05	2.5097	0.0012569	500.7896349591298	83.068	0.65031	84.256	83.833	84.484	1.1879					44	20	3	0	0	0	0.026628	2	34868	34868;34909		92.822	18.399	1	3265200			20005	4352	9699	9738	23084;23085	23084					0.06428412734146605
LPEAFPITL	9	Unmodified	_LPEAFPITL_					0	0	0		ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	ENSG00000175073|ENST00000310421|VCPIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7906677126884	2	500.789318	999.564084	2.5863	0.0012952	-0.57597	-0.00028844	2.0103	0.0010067	500.78917624570056	82.672	0.58717	84.342	83.923	84.51	1.67					38	18	3	0	0	0	0.026628	2	34660	34660;34709		92.822	28.586	1	4715300			20006	4352	9699	9738	23086;23087	23086					0.06428412734146605
LPEDFLNSL	9	Unmodified	_LPEDFLNSL_					0	0	0		ENSG00000172009|ENST00000307741|THOP1	ENSG00000172009|ENST00000307741|THOP1	ENSG00000172009|ENST00000307741|THOP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2736694216728	2	524.27149	1046.52843	2.7564	0.0014451	1.1004	0.00057689	3.8568	0.002022	524.2721792021582	76.03	0.34496	77.798	77.627	77.972	1.7672					22	10	3	0	0	0	0.30098	1	31869	31869		25.399	3.6527	1	2158500			20007	4224	9700	9739	23088	23088					0.00702330486478786
LPEDLYHLI	9	Unmodified	_LPEDLYHLI_					0	0	0		ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF	ENST00000458227.1_1_2:25191966-25192092:-|nuORF	ENST00000458227.1_1_2:25191966-25192092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8047973513603	2	556.802957	1111.59136	2.0743	0.001155	0.39214	0.00021834	2.4665	0.0013733	556.8038384782784	68.046	0.43269	69.424	69.182	69.615	1.3778					36	13	4	0	0	0	0.018723	2	28577	28532;28577		100.37	48.103	1	4307700			20008	1712	9701	9740	23089;23090	23090					0.040028962745282115
LPEDLYHLI	9	Unmodified	_LPEDLYHLI_					0	0	0		ENST00000458227.1_1_2:25191966-25192092:-|nuORF;ENST00000531908.5_1_11:17095982-17097186:-|nuORF;ENSG00000110700|ENST00000525634|RPS13;ENST00000526895.5_1_11:17095982-17099246:-|nuORF	ENST00000458227.1_1_2:25191966-25192092:-|nuORF	ENST00000458227.1_1_2:25191966-25192092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3077880740166	2	556.802957	1111.59136	1.4719	0.00081955	0.59289	0.00033012	2.0648	0.0011497	556.8038772883979	67.462	0.48962	69.332	69.059	69.549	1.87					37	15	4	0	0	0	0.018723	2	28297	28297;28342		100.37	41.693	1	4098800			20009	1712	9701	9740	23091;23092	23091					0.040028962745282115
LPEDRDYF	8	Unmodified	_LPEDRDYF_					0	0	0		tr|A0A7D6VS37|A0A7D6VS37_9CLOTPutativehemintransportsystempermeaseproteinHrtBOS=ClostridiumintestinaleOX=36845GN=HZF06_04150PE=3SV=1	tr|A0A7D6VS37|A0A7D6VS37_9CLOTPutativehemintransportsystempermeaseproteinHrtBOS=ClostridiumintestinaleOX=36845GN=HZF06_04150PE=3SV=1	tr|A0A7D6VS37|A0A7D6VS37_9CLOTPutativehemintransportsystempermeaseproteinHrtBOS=ClostridiumintestinaleOX=36845GN=HZF06_04150PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.3060790896416	2	527.745639	1053.47673	2.8225	0.0014895	1.5197	0.00080203	4.3422	0.0022916	527.7463666174664	82.704	0.12026	84.374	84.294	84.415	1.67					5	3	2	0	0	0	2.3239	1	34711	34711		2.8892	0	1	207820			20010	16854	9702	9741	23093	23093					-0.047874132074412046
LPEEISGLTSL	11	Unmodified	_LPEEISGLTSL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;ENST00000487251.5_1_6:53762124-53769284:+|nuORF	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8174316287041	2	579.816261	1157.61797	2.0222	0.0011725	0.82664	0.0004793	2.8489	0.0016518	579.8166342751116	68.71	0.46811	70.076	69.816	70.284	1.3657					48	14	4	0	0	0	0.0024177	3	28835	28792;28835;28880		126.57	47.838	1	12462000			20011	2764	9703	9742	23094;23095;23096	23095					0.04546540375190489
LPEEISGLTSL	11	Unmodified	_LPEEISGLTSL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;ENST00000487251.5_1_6:53762124-53769284:+|nuORF	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8175536990166	2	579.816261	1157.61797	2.219	0.0012866	0.50098	0.00029047	2.7199	0.0015771	579.8164143775965	68.155	0.47065	70.025	69.796	70.267	1.87					47	14	4	0	0	0	0.0023981	3	28611	28565;28611;28650		118.89	53.66	1	9806300			20012	2764	9703	9742	23097;23098;23099	23098					0.04546540375190489
LPEEYTSTLK	10	Unmodified	_LPEEYTSTLK_					0	0	0		ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	ENSG00000063761|ENST00000238561|ADCK1	ENSG00000063761|ENST00000238561|ADCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8091918826103	2	590.808436	1179.60232	2.1786	0.0012871	-0.13593	-8.031E-05	2.0426	0.0012068	590.8081335689312	68.688	0.34496	70.054	69.875	70.22	1.3657					22	10	3	0	0	0	0.45795	1	28845	28845		29.841	2.2118	1	1372100			20013	765	9704	9743	23100	23100					0.019702538581213958
LPEEYTSTLK	10	Unmodified	_LPEEYTSTLK_					0	0	0		ENSG00000063761|ENST00000238561|ADCK1;nc|ENSG00000063761|Q86TW2|ADCK1	ENSG00000063761|ENST00000238561|ADCK1	ENSG00000063761|ENST00000238561|ADCK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	590.808436	1179.60232	2.298	0.0013577	-0.90475	-0.00053454	1.3932	0.00082313	590.8074650538367	68.176	0.28204	70.046	69.887	70.169	1.87	-0.0038418	-0.00058995	NaN	29.841	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1339600			20014	765	9704	9743							0.019702538581213958
LPEFNLIHSL	10	Unmodified	_LPEFNLIHSL_					0	0	0		ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3315917849541	2	591.829506	1181.64446	2.0269	0.0011996	-2.5944	-0.0015355	-0.56748	-0.00033585	592.3290495246695	71.432	0.45721	72.774	72.541	72.998	1.3415					30	14	3	0	0	0	0.50772	1	29963	29963		27.223	4.487	1	2910100			20015	5340	9705	9744	23101	23101					0.060902740572146286
LPEFNLIHSL	10	Unmodified	_LPEFNLIHSL_					0	0	0		ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	ENSG00000241945|ENST00000291576|PWP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3292724490166	2	591.829506	1181.64446	1.0676	0.00063186	-1.3117	-0.0007763	-0.24406	-0.00014444	592.3295583208737	71.029	0.39357	72.853	72.547	72.941	1.824					30	12	4	0	0	0	0.046747	2	29831	29766;29831		84.522	46.347	1	1692500			20016	5340	9705	9744	23102;23103	23103					0.060902740572146286
LPEGPPRRP	9	Unmodified	_LPEGPPRRP_					0	0	0			REV__ENSG00000254726|ENST00000532414|MEX3A	REV__ENSG00000254726|ENST00000532414|MEX3A	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1971313357353	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.298	1	21.298	20.798	21.798	0								0	0	0	0.42693	1	8855	8855		1.1933	0.12188	1		+		20017	11967	9706	9745	23104	23104					0.06387984774266897
LPEKEVLVL	9	Unmodified	_LPEKEVLVL_					0	0	0		nc|ENSG00000136940|Q13371-2|PDCL;ENSG00000136940|ENST00000259467|PDCL	nc|ENSG00000136940|Q13371-2|PDCL	nc|ENSG00000136940|Q13371-2|PDCL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3255493044853	2	520.323525	1038.6325	2.2899	0.0011915	0.68751	0.00035773	2.9774	0.0015492	520.3251182078623	47.053	0.86393	48.435	48.058	48.922	1.3825					51	26	4	0	0	0	0.1052	1	19666	19666		47.594	9.6204	1	2939300			20018	2753	9707	9746	23105	23105					0.11472657313993295
LPEKTEEDED	10	Unmodified	_LPEKTEEDED_					0	0	0			REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1797973513603	3	402.178707	1203.51429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6836	1	9.4181	8.9181	9.9181	0.73452								0	0	0	0.66254	1	3611	3611		0.15932	0	1		+		20019	8154	9708	9747	23106	23106					-0.07932411523120209
LPEKTEEDED	10	Unmodified	_LPEKTEEDED_					0	0	0			REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1796142458916	3	402.178707	1203.51429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7843	1	9.5188	9.0188	10.019	0.73452								0	0	0	0.66254	1	3653	3653		0.15932	0	1		+		20020	8154	9708	9747	23107	23107					-0.07932411523120209
LPELKEKESFI	11	Unmodified	_LPELKEKESFI_					0	0	0		ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	666.8751708865166	2	666.874111	1331.73367	1.5313	0.0010212	0.40258	0.00026847	1.9339	0.0012897	666.8740777186033	71.623	0.21768	72.965	72.812	73.03	1.3415					11	6	2	0	0	0	0.42228	1	30052	30052		26.268	0.24744	1	1767200			20021	2682	9709	9748	23108	23108					0.0810706422603289
LPELKEKESFI	11	Unmodified	_LPELKEKESFI_					0	0	0		ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	ENSG00000135698|ENST00000258169|MPHOSPH6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	666.874111	1331.73367	1.0965	0.0007312	1.1261	0.000751	2.2226	0.0014822	666.8747809744801	71.182	0.37124	73.006	72.758	73.129	1.824	0.0209	0.00047049	NaN	26.268	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1438300			20022	2682	9709	9748							0.0810706422603289
LPEPYWIVL	9	Unmodified	_LPEPYWIVL_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3174926638603	2	565.318243	1128.62193	4.1968	0.0023725	0.58129	0.00032862	4.7781	0.0027011	565.3185021518715	94.666	0.38255	95.407	95.136	95.519	0.74124					19	11	2	0	0	0	0.49082	1	39811	39811		15.847	1.0089	1	1049600			20023	1776	9710	9749	23109	23109					0.06276674659557102
LPEPYWIVL	9	Unmodified	_LPEPYWIVL_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3188964724541	2	565.318243	1128.62193	3.2763	0.0018522	0.82918	0.00046875	4.1055	0.0023209	565.3188073360961	94.194	0.44835	95.383	95.11	95.559	1.1887					23	13	3	0	0	0	0.46905	1	39628	39628		16.942	6.1184	1	1121300			20024	1776	9710	9749	23110	23110					0.06276674659557102
LPEQEIFQM	9	Unmodified	_LPEQEIFQM_					0	0	0		ENST00000490563.5_1_1:44457877-44459596:+|nuORF;ENST00000486064.5_1_1:44457112-44459637:+|nuORF;nc|ENSG00000159214|Q8N4L8-2|CCDC24;ENSG00000159214|ENST00000372318|CCDC24	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7797119021416	2	567.778625	1133.5427	2.2158	0.0012581	0.91627	0.00052024	3.1321	0.0017783	567.7789010672466	63.794	0.60163	65.202	64.958	65.56	1.4071					58	18	4	0	0	0	0.053939	2	26735	26735;26786		66.457	32.055	1	5732300			20025	3520	9711	9750	23111;23112	23111					-0.01873340356883091
LPEQEIFQM	9	Unmodified	_LPEQEIFQM_					0	0	0		ENST00000490563.5_1_1:44457877-44459596:+|nuORF;ENST00000486064.5_1_1:44457112-44459637:+|nuORF;nc|ENSG00000159214|Q8N4L8-2|CCDC24;ENSG00000159214|ENST00000372318|CCDC24	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	ENST00000490563.5_1_1:44457877-44459596:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.7802001833916	2	567.778625	1133.5427	2.3989	0.001362	0.81613	0.00046338	3.215	0.0018254	567.778934669725	63.288	0.57037	65.233	64.997	65.567	1.9444					58	17	5	0	0	0	0.053939	2	26560	26511;26560		66.457	32.055	1	6280100			20026	3520	9711	9750	23113;23114	23114					-0.01873340356883091
LPEREFARI	9	Unmodified	_LPEREFARI_					0	0	0		ENST00000445146.1_1_2:172379775-172398215:+|nuORF	ENST00000445146.1_1_2:172379775-172398215:+|nuORF	ENST00000445146.1_1_2:172379775-172398215:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	565.3569213747978	2	565.819473	1129.62439	3.6185	0.0020474	-3.8165	-0.0021595	-0.19807	-0.00011207	565.8175286991071	82.048	0.28345	83.719	83.639	83.923	1.67					9	8	2	0	0	0	0.11463	1	34453	34453		7.9102	2.6795	1	666200			20027	6578	9712	9751	23115	23115					0.06476523117225952
LPERLSLVI	9	Unmodified	_LPERLSLVI_					0	0	0		nc|ENSG00000106123|O15197-2|EPHB6;nc|ENSG00000106123|O15197|EPHB6;ENSG00000106123|ENST00000652003|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3260986208916	2	520.329142	1038.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.464	1	48.435	47.935	48.935	1.9703								0	0	0	0.18526	1	19464	19464		29.082	3.6823	1				20028	1557	9713	9752	23116	23116					0.12595479408128085
LPERLSLVI	9	Unmodified	_LPERLSLVI_					0	0	0		nc|ENSG00000106123|O15197-2|EPHB6;nc|ENSG00000106123|O15197|EPHB6;ENSG00000106123|ENST00000652003|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	nc|ENSG00000106123|O15197-2|EPHB6	MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3248779177666	2	520.329142	1038.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.572	1	48.542	48.042	49.042	1.9703								0	0	0	0.060473	1	19509	19509		45.7	13.394	1				20029	1557	9713	9752	23117	23117					0.12595479408128085
LPESATMQPP	10	Unmodified	_LPESATMQPP_					0	0	0			REV__nc|ENSG00000133816|O94851|MICAL2	REV__nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.3011352419853	2	535.762975	1069.5114	2.3313	0.001249	0.94179	0.00050458	3.2731	0.0017536	535.7644235306591	68.313	0.36798	69.69	69.491	69.859	1.3778					17	11	2	0	0	0	0.12448	1	28630	28630		8.1555	0	1	4079300	+		20030	14437	9714	9753	23118	23118					-0.020579133909677694
LPETTFPAL	9	Unmodified	_LPETTFPAL_					0	0	0		nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG	nc|ENSG00000275066|Q9UMZ2-6|SYNRG	nc|ENSG00000275066|Q9UMZ2-6|SYNRG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7717773318291	2	494.771126	987.527698	2.0872	0.0010327	0.35971	0.00017797	2.4469	0.0012107	494.7712652422619	66.014	0.42045	67.413	67.216	67.636	1.3989					30	13	3	0	0	0	0.087207	2	27738	27686;27738		53.576	15.424	1	3108300			20031	5457	9715	9754	23119;23120	23120					0.033435358374163116
LPETTFPAL	9	Unmodified	_LPETTFPAL_					0	0	0		nc|ENSG00000275066|Q9UMZ2-6|SYNRG;nc|ENSG00000275066|Q9UMZ2-9|SYNRG;nc|ENSG00000275066|Q9UMZ2-4|SYNRG;nc|ENSG00000275066|Q9UMZ2-8|SYNRG;nc|ENSG00000275066|Q9UMZ2-3|SYNRG;nc|ENSG00000275066|Q9UMZ2-7|SYNRG;nc|ENSG00000275066|Q9UMZ2-5|SYNRG;ENSG00000275066|ENST00000612223|SYNRG	nc|ENSG00000275066|Q9UMZ2-6|SYNRG	nc|ENSG00000275066|Q9UMZ2-6|SYNRG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7722045779228	2	494.771126	987.527698	1.8005	0.00089082	0.070561	3.4911E-05	1.871	0.00092574	494.77086944970466	65.549	0.43036	67.457	67.248	67.679	1.9085					27	13	3	0	0	0	0.061246	1	27490	27490		63.563	3.1733	1	3108400			20032	5457	9715	9754	23121	23121					0.033435358374163116
LPEWKENIM	9	Unmodified	_LPEWKENIM_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.2961913943291	2	580.294442	1158.57433	1.9391	0.0011253	0.79604	0.00046194	2.7352	0.0015872	580.2956052448608	46.905	0.2877	48.288	48.122	48.41	1.3825					20	8	3	0	0	0	0.15456	1	19645	19645		38.176	3.7738	1	863810			20033	5052	9716	9755	23122	23122					0.0013865239704955457
LPEWKENIM	9	Unmodified	_LPEWKENIM_					0	0	0		ENST00000414990.2_3_7:143295168-143301929:+|nuORF;ENST00000392900.3_1_7:143551228-143582358:-|nuORF;nc|ENSG00000198420|Q9Y4C2-2|TCAF1;ENSG00000198420|ENST00000479870|TCAF1	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	ENST00000414990.2_3_7:143295168-143301929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.2962524294853	2	580.294442	1158.57433	1.6147	0.00093698	0.59182	0.00034343	2.2065	0.0012804	580.2950032189966	46.455	0.27832	48.425	48.251	48.529	1.9703					14	8	2	0	0	0	0.15456	1	19456	19456		38.176	3.7738	1	1055600			20034	5052	9716	9755	23123	23123					0.0013865239704955457
LPEYLPFVL	9	Unmodified	_LPEYLPFVL_					0	0	0		ENSG00000111530|ENST00000545606|CAND1;nc|ENSG00000111530|Q86VP6-2|CAND1	ENSG00000111530|ENST00000545606|CAND1	ENSG00000111530|ENST00000545606|CAND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8168212771416	2	545.812793	1089.61103	3.249	0.0017734	3.2579	0.0017782	6.5069	0.0035516	545.8141083683364	96.747	0.15804	97.053	96.975	97.133	0.3062					7	4	2	0	0	0	0.20671	1	40705	40705		32.305	6.9062	1	1989500			20035	1740	9717	9756	23124	23124					0.06981272285270279
LPFDGPNLPTL	11	Unmodified	_LPFDGPNLPTL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3243896365166	2	592.321514	1182.62847	2.6563	0.0015734	1.4777	0.00087526	4.134	0.0024486	592.3225004288377	80.216	0.49725	81.467	81.263	81.76	1.2512					36	15	3	0	0	0	0.0089405	1	33706	33706		106.94	65.101	1	2263000			20036	2986	9718	9757	23125	23125					0.04446567820286873
LPFDGPNLPTL	11	Unmodified	_LPFDGPNLPTL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3221313357353	2	592.321514	1182.62847	1.3948	0.00082615	1.5408	0.00091263	2.9355	0.0017388	592.3223794025662	79.833	0.40482	81.549	81.353	81.758	1.7167					28	12	3	0	0	0	0.026294	2	33509	33443;33509		92.653	56.526	1	1397700			20037	2986	9718	9757	23126;23127	23127					0.04446567820286873
LPFEGKVNL	9	Unmodified	_LPFEGKVNL_					0	0	0		ENST00000461129.5_1_6:126319428-126329623:+|nuORF;nc|ENSG00000066651|Q7Z4G4-3|TRMT11;nc|ENSG00000066651|Q7Z4G4-2|TRMT11;ENSG00000066651|ENST00000334379|TRMT11	ENST00000461129.5_1_6:126319428-126329623:+|nuORF	ENST00000461129.5_1_6:126319428-126329623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7931396365166	2	508.792392	1015.57023	2.6313	0.0013388	1.6905	0.00086012	4.3218	0.0021989	508.7927673345334	47.713	0.41164	49.095	48.792	49.204	1.3825					29	12	3	0	0	0	0.019486	2	19991	19942;19991		99.755	21.606	1	4188200			20038	810	9719	9758	23128;23129	23129					0.06306930965661195
LPFEGKVNL	9	Unmodified	_LPFEGKVNL_					0	0	0		ENST00000461129.5_1_6:126319428-126329623:+|nuORF;nc|ENSG00000066651|Q7Z4G4-3|TRMT11;nc|ENSG00000066651|Q7Z4G4-2|TRMT11;ENSG00000066651|ENST00000334379|TRMT11	ENST00000461129.5_1_6:126319428-126329623:+|nuORF	ENST00000461129.5_1_6:126319428-126329623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7936584353447	2	508.792392	1015.57023	2.6746	0.0013608	0.9115	0.00046376	3.5861	0.0018246	508.7924450476662	47.196	0.44159	49.172	48.87	49.311	1.976					26	13	3	0	0	0	0.0070725	2	19795	19746;19795		114.2	36.052	1	3864400			20039	810	9719	9758	23130;23131	23131					0.06306930965661195
LPFFTEREQTL	11	Unmodified	_LPFFTEREQTL_					0	0	0		ENSG00000088035|ENST00000263440|ALG6;ROR1-ALG6|1|fusion	ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	690.8613769412041	2	690.861534	1379.70852	0.71546	0.00049428	-0.11743	-8.1129E-05	0.59803	0.00041315	690.8615056238066	57.237	0.33197	58.652	58.462	58.794	1.4145					25	11	3	0	0	0	0.025924	2	24014	23965;24014		94.909	64.272	1	4119800			20040	1094	9720	9759	23132;23133	23133					0.03385009423459451
LPFFTEREQTL	11	Unmodified	_LPFFTEREQTL_					0	0	0		ENSG00000088035|ENST00000263440|ALG6;ROR1-ALG6|1|fusion	ENSG00000088035|ENST00000263440|ALG6	ENSG00000088035|ENST00000263440|ALG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	690.8623535037041	2	690.861534	1379.70852	0.25686	0.00017746	0.44089	0.00030459	0.69775	0.00048205	690.8618660747003	56.648	0.3255	58.616	58.425	58.751	1.9684					25	10	3	0	0	0	0.0054879	2	23740	23740;23793		111.31	82.227	1	4358700			20041	1094	9720	9759	23134;23135	23134					0.03385009423459451
LPFFVKELV	9	Unmodified	_LPFFVKELV_					0	0	0		ENSG00000179097|ENST00000319595|HTR1F	ENSG00000179097|ENST00000319595|HTR1F	ENSG00000179097|ENST00000319595|HTR1F	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.8309814333916	2	546.328611	1090.64267	3.238	0.001769	-4.3192	-0.0023597	-1.0812	-0.00059068	546.3254567537587	100.34	0.086777	100.54	100.48	100.56	0.20526					4	2	2	0	0	0	0.099861	1	42198	42198		14.582	0	1	239140			20042	4505	9721	9760	23136	23136					0.10097265039212289
LPFGKVTNL	9	Unmodified	_LPFGKVTNL_					0	0	0		ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1;ENST00000590887.5_1_19:797434-804304:+|nuORF;PTBP1-COL1A2|1|fusion;nc|ENSG00000119314|O95758-1|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3	ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000119314|O95758-1|PTBP3	nc|ENSG00000119314|O95758-1|PTBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7959777712822	2	494.794935	987.575317	1.6297	0.00080635	0.58493	0.00028942	2.2146	0.0010958	494.7952085614246	46.094	0.62752	47.469	47.085	47.712	1.3751					62	19	5	0	0	0	2.7126E-05	4	19285	19248;19285;19324;19366		165.72	0	1	36501000			20043	567;2063	9722	9761	23137;23138;23139;23140	23138					0.08103234828263339
LPFGKVTNL	9	Unmodified	_LPFGKVTNL_					0	0	0		ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1;ENST00000590887.5_1_19:797434-804304:+|nuORF;PTBP1-COL1A2|1|fusion;nc|ENSG00000119314|O95758-1|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3	ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000119314|O95758-1|PTBP3	nc|ENSG00000119314|O95758-1|PTBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7959167361259	2	494.794935	987.575317	1.476	0.00073031	0.4593	0.00022726	1.9353	0.00095757	494.79515174671553	45.613	0.51114	47.583	47.31	47.821	1.9703					56	15	5	0	0	0	0.00023236	4	19084	19039;19084;19123;19163		140.63	0	1	32096000			20044	567;2063	9722	9761	23141;23142;23143;23144	23142					0.08103234828263339
LPFIKGKLHL	10	Unmodified	_LPFIKGKLHL_					0	0	0		ENST00000320248.3_1_8:1954634-1955009:+|nuORF	ENST00000320248.3_1_8:1954634-1955009:+|nuORF	ENST00000320248.3_1_8:1954634-1955009:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3787109255791	2	583.376426	1164.7383	0.63201	0.0003687	2.0695	0.0012073	2.7015	0.001576	583.3775741063457	27.124	0.71151	28.871	28.524	29.235	1.747					49	22	3	0	0	0	0.89803	1	11402	11402		0.40072	0	1	4237900			20045	5843	9723	9762	23145	23145					0.16252037950130216
LPFLHRRPR	9	Unmodified	_LPFLHRRPR_					0	0	0		ENST00000533146.5_1_15:40979267-40987285:-|nuORF	ENST00000533146.5_1_15:40979267-40987285:-|nuORF	ENST00000533146.5_1_15:40979267-40987285:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3665649294853	2	596.364716	1190.71488	2.9985	0.0017882	0.34824	0.00020768	3.3468	0.0019959	596.3672693719335	87.112	0.7085	87.112	86.67	87.378	0					81	29	4	0	0	0	0.84963	1	36228	36228		0.6015	0.076735	1	11782000			20046	7182	9724	9763	23146	23146					0.12715036956137737
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2239562869072	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.682	1	63.011	62.511	63.511	0.32974								0	0	0	0.42693	1	26262	26262		0.26902	0	1				20047	5519	9725	9764	23147	23147					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2237731814384	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.234	1	72.558	72.058	73.058	0.32494								0	0	0	0.42693	1	30222	30222		0.26902	0	1				20048	5519	9725	9764	23148	23148					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2227050662041	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.61	1	73.935	73.435	74.435	0.32494								0	0	0	0.42693	1	30796	30796		0.26902	0	1				20049	5519	9725	9764	23149	23149					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2243530154228	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.762	1	74.086	73.586	74.586	0.32494								0	0	0	0.42693	1	30858	30858		0.26902	0	1				20050	5519	9725	9764	23150	23150					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2234680056572	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.89	1	74.215	73.715	74.715	0.32494								0	0	0	0.42693	1	30910	30910		0.26902	0	1				20051	5519	9725	9764	23151	23151					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2223693728447	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.007	1	74.332	73.832	74.832	0.32494								0	0	0	0.42693	1	30958	30958		0.26902	0	1				20052	5519	9725	9764	23152	23152					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2238036990166	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.589	1	88.824	88.324	89.324	0.23471								0	0	0	0.42693	1	37144	37144		0.26902	0	1				20053	5519	9725	9764	23153	23153					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2225524783134	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.744	1	71.098	70.598	71.598	1.3536								0	0	0	0.42693	1	29274	29274		0.26902	0	1				20054	5519	9725	9764	23154	23154					0.13168988621691824
LPFLPPPKK	9	Unmodified	_LPFLPPPKK_					0	0	0		ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	ENST00000216277.12_1_14:97033014-97033080:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2234374880791	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.086	1	71.44	70.94	71.94	1.3536								0	0	0	0.42693	1	29416	29416		0.26902	0	1				20055	5519	9725	9764	23155	23155					0.13168988621691824
LPFQRLVREIA	11	Unmodified	_LPFQRLVREIA_					0	0	0		ENSG00000188375|ENST00000340398|H3-5;ENST00000404612.1_1_6:26322271-26322325:-|nuORF;nc|ENSG00000273213|Q5TEC6|H3-7;ENSG00000269466|ENST00000598383|H3Y1;ENSG00000278828|ENST00000685041|H3C10;ENSG00000277775|ENST00000618052|H3C7;ENSG00000275714|ENST00000613854|H3C1;ENSG00000275379|ENST00000616365|H3C11;ENSG00000274750|ENST00000614911|H3C6;ENSG00000273983|ENST00000614378|H3C8;ENSG00000203811|ENST00000369158|H3C14;ENST00000401004.2_1:120904811-120905087:+|nuORF;ENSG00000197409|ENST00000356476|H3C4;ENSG00000197153|ENST00000359303|H3C12;ENSG00000183598|ENST00000331491|H3C13;ENSG00000163041|ENST00000366815|H3-3A;ENSG00000132475|ENST00000254810|H3-3B;ENSG00000203852|ENST00000403683|H3C15;ENST00000586518.1_1_17:73774674-73775034:-|nuORF;ENSG00000268799|ENST00000600799|H3Y2	ENSG00000188375|ENST00000340398|H3-5	ENSG00000188375|ENST00000340398|H3-5	MSMS	GG20161007_CRH_Patient100_W632_02	4	671.4045898318291	2	671.403704	1340.79285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.748	1	95.937	95.437	96.437	1.1887								0	0	0	0.63775	1	39861	39861		1.3295	0	1				20056	4858	9726	9765	23156	23156					0.1360900503088942
LPFRLLKKFKL	11	Unmodified	_LPFRLLKKFKL_					0	0	0		tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9689208865166	2	701.968483	1401.92241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6706	1	9.6706	9.1706	10.171	0								0	0	0	0.63775	1	3982	3982		0	0	1				20057	16527	9727	9766	23157	23157					0.23752806380821312
LPFRLLKKFKL	11	Unmodified	_LPFRLLKKFKL_					0	0	0		tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9697143435478	2	701.968483	1401.92241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.86	1	16.86	16.36	17.36	0								0	0	0	0.63775	1	6998	6998		0	0	1				20058	16527	9727	9766	23158	23158					0.23752806380821312
LPFRLLKKFKL	11	Unmodified	_LPFRLLKKFKL_					0	0	0		tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	468.3896667361259	3	468.314747	1401.92241	3.5729	0.0016732	0.92498	0.00043318	4.4979	0.0021064	468.3156033516327	105.82	0.11345	105.99	105.92	106.03	0.16679					9	5	2	0	0	0	0.14606	1	45091	45091		0	0	1	15936000			20059	16527	9727	9766	23159	23159					0.23752806380821312
LPFRLLKKFKL	11	Unmodified	_LPFRLLKKFKL_					0	0	0		tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	468.314747	1401.92241	3.3396	0.001564	0.72431	0.0003392	4.064	0.0019032	468.315216575734	105.83	0.095177	105.99	105.94	106.04	0.15859	0.0011987	-0.0001391	NaN	0	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12611000			20060	16527	9727	9766							0.23752806380821312
LPFTPVLTV	9	Unmodified	_LPFTPVLTV_					0	0	0		tr|A0A7D6ZQH2|A0A7D6ZQH2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00345PE=3SV=1	tr|A0A7D6ZQH2|A0A7D6ZQH2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00345PE=3SV=1	tr|A0A7D6ZQH2|A0A7D6ZQH2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00345PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8022338747978	2	493.799686	985.584819	3.3349	0.0016468	-0.8359	-0.00041277	2.499	0.001234	493.800236714924	92.872	0.3839	94.149	93.908	94.292	1.277					19	11	2	0	0	0	0.24063	1	39077	39077		28.487	2.1456	1	721450			20061	17124	9728	9767	23160	23160					0.09145003113792427
LPFVDERRL	9	Unmodified	_LPFVDERRL_					0	0	0		nc|ENSG00000088930|Q9H0D6-2|XRN2;ENSG00000088930|ENST00000377191|XRN2	nc|ENSG00000088930|Q9H0D6-2|XRN2	nc|ENSG00000088930|Q9H0D6-2|XRN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.2226135134697	3	382.220624	1143.64004	0.66888	0.00025566	0.1176	4.4948E-05	0.78647	0.00030061	382.2209007928408	38.025	0.33456	39.845	39.67	40.004	1.8202					16	10	2	0	0	0	0.6588	1	15959	15959		8.9762	2.2531	1	1121100			20062	1112	9729	9768	23161	23161					0.0739680963426963
LPFVDERRL	9	Unmodified	_LPFVDERRL_					0	0	0		nc|ENSG00000088930|Q9H0D6-2|XRN2;ENSG00000088930|ENST00000377191|XRN2	nc|ENSG00000088930|Q9H0D6-2|XRN2	nc|ENSG00000088930|Q9H0D6-2|XRN2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	382.220624	1143.64004	1.072	0.00040974	0.21728	8.3048E-05	1.2893	0.00049279	382.22083862607127	38.72	0.39024	40.016	39.774	40.164	1.2961	0.085463	4.6681E-05	NaN	8.9762	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1084200			20063	1112	9729	9768							0.0739680963426963
LPFVYFWW	8	Unmodified	_LPFVYFWW_					0	0	0		ENST00000398238.8_1_17:44834336-44834585:+|nuORF	ENST00000398238.8_1_17:44834336-44834585:+|nuORF	ENST00000398238.8_1_17:44834336-44834585:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	579.2962524294853	2	579.294571	1156.57459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.252	1	57.662	57.162	58.162	1.4099								0	0	0	1.0178	1	23575	23575		6.3541	0.14832	1				20064	6322	9730	9769	23162	23162					0.0025644017921422346
LPFYLGAEL	9	Unmodified	_LPFYLGAEL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54;ENST00000342887.1_1_12:97043703-97159031:+|nuORF	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7823974490166	2	511.781493	1021.54843	2.8436	0.0014553	-1.0861	-0.00055583	1.7576	0.00089948	511.78104065813983	83.123	0.30898	84.311	84.111	84.42	1.1879					15	9	2	0	0	0	0.3154	1	34890	34890		24.674	0	1	705060			20065	4871	9731	9770	23163	23163					0.03852126217077512
LPFYLGAEL	9	Unmodified	_LPFYLGAEL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54;ENST00000342887.1_1_12:97043703-97159031:+|nuORF	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	511.781493	1021.54843	3.1911	0.0016332	-0.43384	-0.00022203	2.7573	0.0014111	511.78116487960006	82.62	0.24137	84.29	84.173	84.415	1.67	-0.010381	0.00051498	NaN	24.674	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	413260			20066	4871	9731	9770							0.03852126217077512
LPGALHSLLV	10	Unmodified	_LPGALHSLLV_					0	0	0		ENST00000600801.5_1_3:181417563-181457401:+|nuORF	ENST00000600801.5_1_3:181417563-181457401:+|nuORF	ENST00000600801.5_1_3:181417563-181457401:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3188964724541	2	510.316035	1018.61752	2.0002	0.0010207	0.085452	4.3608E-05	2.0857	0.0010643	510.3156147400586	58.783	0.46684	60.201	59.941	60.407	1.4181					21	14	2	0	0	0	0.13671	1	24658	24658		57.471	7.5383	1	1340000			20067	7539	9732	9771	23164	23164					0.10895210236674302
LPGALHSLLV	10	Unmodified	_LPGALHSLLV_					0	0	0		ENST00000600801.5_1_3:181417563-181457401:+|nuORF	ENST00000600801.5_1_3:181417563-181457401:+|nuORF	ENST00000600801.5_1_3:181417563-181457401:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	510.316035	1018.61752	1.665	0.00084968	4.6639	0.0023801	6.329	0.0032298	510.3189210802707	58.328	0.28858	60.297	60.084	60.373	1.969	0.048194	0.0015899	NaN	57.471	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1442600			20068	7539	9732	9771							0.10895210236674302
LPGATISR	8	Unmodified	_LPGATISR_					0	0	0		ENST00000608004.1_1_19:58817468-58823414:+|nuORF	ENST00000608004.1_1_19:58817468-58823414:+|nuORF	ENST00000608004.1_1_19:58817468-58823414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	407.7413513064384	2	407.742702	813.470852	-0.097744	-3.9854E-05	-2.2387	-0.0009128	-2.3364	-0.00095265	407.7418577881249	15.512	0.16202	16.339	16.231	16.393	0.82643					7	5	2	0	0	0	0.58448	1	6443	6443		41.84	3.8656	1	1172300			20069	7569	9733	9772	23165	23165					0.05665533071578466
LPGATISR	8	Unmodified	_LPGATISR_					0	0	0		ENST00000608004.1_1_19:58817468-58823414:+|nuORF	ENST00000608004.1_1_19:58817468-58823414:+|nuORF	ENST00000608004.1_1_19:58817468-58823414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	407.7426025271416	2	407.742702	813.470852	0.13436	5.4784E-05	-1.1461	-0.00046731	-1.0117	-0.00041252	407.7421618058189	15.403	0.15792	16.442	16.364	16.522	1.0392					9	5	3	0	0	0	0.58448	1	6395	6395		41.84	3.8656	1	1271300			20070	7569	9733	9772	23166	23166					0.05665533071578466
LPGGAERQ	8	Unmodified	_LPGGAERQ_					0	0	0		ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.2229797244072	2	414.222134	826.429715	-0.57876	-0.00023973	1.9383	0.00080287	1.3595	0.00056314	414.22306058957963	1.6366	0.19784	2.2899	2.2112	2.4091	0.65331					20	10	3	0	0	0	0.62161	1	670	670		38.151	3.9638	1	475210			20071	5766	9734	9773	23167	23167					0.009557720320913177
LPGGAERQ	8	Unmodified	_LPGGAERQ_					0	0	0		ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.2226745486259	2	414.222134	826.429715	-0.0098129	-4.0647E-06	1.8783	0.00077804	1.8685	0.00077398	414.2228836410512	1.5899	0.19265	2.3383	2.2552	2.4478	0.7484					21	9	3	0	0	0	0.5808	1	656	656		42.095	1.646	1	882060			20072	5766	9734	9773	23168	23168					0.009557720320913177
LPGGAERQ	8	Unmodified	_LPGGAERQ_					0	0	0		ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	ENST00000303004.4_1_20:48807959-48808286:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	414.222134	826.429715	-0.68988	-0.00028576	3.0052	0.0012448	2.3154	0.00095907	414.22358654416934	2.1449	0.17631	2.1449	2.0483	2.2246	0	-0.073131	0.0010978	NaN	42.095	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	285040			20073	5766	9734	9773							0.009557720320913177
LPGLVLGECIR	11	Unmodified	_LPGLVLGECIR_					0	0	0		chr3:195070111-195087933|297|11.33|0.27|5.37|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|69	chr3:195070111-195087933|297|11.33|0.27|5.37|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|69	chr3:195070111-195087933|297|11.33|0.27|5.37|-|0|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|69	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3403198122978	2	585.339184	1168.66381	1.9026	0.0011136	-0.78708	-0.00046071	1.1155	0.00065293	585.338844360592	77.064	0.68742	77.064	76.814	77.502	0					55	21	4	0	0	0	0.50052	1	32134	32134		24.021	1.3625	1	4367900			20074	261	9735	9774	23169	23169					0.08622907076437514
LPGMFCCG	8	Unmodified	_LPGMFCCG_					0	0	0		USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant;USH2A|p.Y4273Cfs*19|1|0.36|ENSG00000042781|chr1:215675092-215675093|AT/-|frameshift_variant;ENSG00000042781|ENST00000307340|USH2A;nc|ENSG00000042781|O75445-3|USH2A	USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	827.3251830935478	1	827.324864	826.317587	2.7711	0.0022926	-1.8184	-0.0015044	0.95269	0.00078819	827.3234534089466	102.08	0.1496	102.14	102.04	102.19	0.062805					14	4	4	0	0	0	0.88958	1	42732	42732		2.8892	2.0956	1	30262000			20075	666	9736	9775	23170	23170					-0.10251864632414254
LPGPFLLL	8	Unmodified	_LPGPFLLL_					0	0	0		chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	435.8105651736259	2	435.278389	868.542226	3.1613	0.001376	2.0107	0.00087521	5.172	0.0022513	435.2791823305154	109.16	0.70237	109.21	108.85	109.55	0.049355					66	30	3	0	0	0	2.3239	1	46990	46990		0.79363	0	1	20859000			20076	306	9737	9776	23171	23171					0.10269652776241855
LPGPFLLL	8	Unmodified	_LPGPFLLL_					0	0	0		chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2799560427666	2	435.278389	868.542226	3.3235	0.0014467	1.1626	0.00050604	4.4861	0.0019527	435.27865425925484	109.07	0.65878	109.23	108.93	109.58	0.15899					65	31	3	0	0	0	0.89176	1	47303	47303		0.79363	0	1	34788000			20077	306	9737	9776	23172	23172					0.10269652776241855
LPGPFLLL	8	Unmodified	_LPGPFLLL_					0	0	0		chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2800475955009	2	435.278389	868.542226	3.3168	0.0014437	0.24666	0.00010736	3.5634	0.0015511	435.2784563628948	108.96	0.52989	109.12	108.85	109.38	0.1548					62	25	3	0	0	0	0.89176	1	47154	47154		0.79363	0	1	35176000			20078	306	9737	9776	23173	23173					0.10269652776241855
LPGPFLLL	8	Unmodified	_LPGPFLLL_					0	0	0		chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	chrX:97120275-97141665|89|12.45|0.12|6.67|+|0|TE_info:L1PBa1,L1PBa1_dup297,L1,LINE,donor,-,97118913,97120275|None,DIAPH2|18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	435.278389	868.542226	0.69482	0.00030244	4.1967	0.0018268	4.8916	0.0021292	435.28024010755786	109.1	0.80817	109.1	108.78	109.59	0	-0.06221	0.0022952	NaN	0.79363	88	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23282000			20079	306	9737	9776							0.10269652776241855
LPGPGKKK	8	Unmodified	_LPGPGKKK_					0	0	0			REV__ENSG00000206527|ENST00000383657|HACD2	REV__ENSG00000206527|ENST00000383657|HACD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	824.5382568240166	1	824.535249	823.527973	2.7697	0.0022837	2.5132	0.0020722	5.283	0.004356	824.5371571232979	109.51	0.27331	109.56	109.4	109.68	0.048851					34	10	4	0	0	0	0.89178	1	47245	47245		0.69038	0	1	24768000	+		20080	11827	9738	9777	23174	23174					0.10915000347949899
LPGRRAKA	8	Unmodified	_LPGRRAKA_					0	0	0			REV__ENSG00000179772|ENST00000375978|FOXS1	REV__ENSG00000179772|ENST00000375978|FOXS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	868.5432006716728	1	868.547545	867.540269	1.9955	0.0017332	-2.4639	-0.00214	-0.46838	-0.00040681	868.5447702595728	69.378	0.26155	70.743	70.585	70.847	1.3657					11	8	2	0	0	0	0.88409	1	29131	29131		6.3541	0	1	1409800	+		20081	11283	9739	9778	23175	23175					0.10120036810974398
LPGSNSKILV	10	Unmodified	_LPGSNSKILV_					0	0	0			REV__nc|ENSG00000141384|Q92750-2|TAF4B	REV__nc|ENSG00000141384|Q92750-2|TAF4B	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2118713259697	3	343.209725	1026.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.54	1	101.71	101.21	102.21	0.17032								0	0	0	0.66218	1	42724	42724		0.77653	0	1		+		20082	10142	9740	9779	23176	23176					0.09510602511409161
LPHCDGCD	8	Unmodified	_LPHCDGCD_					0	0	0			REV__ENSG00000273274|ENST00000609129|ZBTB8B	REV__ENSG00000273274|ENST00000609129|ZBTB8B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	859.3115722537041	1	859.3073	858.300023	2.7829	0.0023914	3.1271	0.0026872	5.9101	0.0050786	859.3101823958752	98.536	0.14585	98.616	98.504	98.65	0.080368					10	5	2	0	0	0	0.88958	1	41212	41212		2.8892	0	1	12649000	+		20083	12011	9741	9780	23177	23177					-0.13479488633720393
LPHCDGCD	8	Unmodified	_LPHCDGCD_					0	0	0			REV__ENSG00000273274|ENST00000609129|ZBTB8B	REV__ENSG00000273274|ENST00000609129|ZBTB8B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	859.3073	858.300023	1.2871	0.001106	3.9158	0.0033649	5.2029	0.0044709	859.3104249219919	98.581	0.18168	98.581	98.479	98.66	0	0.01098	0.00024113	NaN	2.8892	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15546000	+		20084	12011	9741	9780							-0.13479488633720393
LPHCDGCD	8	Unmodified	_LPHCDGCD_					0	0	0			REV__ENSG00000273274|ENST00000609129|ZBTB8B	REV__ENSG00000273274|ENST00000609129|ZBTB8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	859.3073	858.300023	2.7829	0.0023914	3.1271	0.0026872	5.9101	0.0050786	859.3101823958752	98.536	0.14585	98.616	98.504	98.65	0.080368	0.046531	-0.00043659	NaN	2.8892	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12649000	+		20085	12011	9741	9780							-0.13479488633720393
LPHCDGCD	8	Unmodified	_LPHCDGCD_					0	0	0			REV__ENSG00000273274|ENST00000609129|ZBTB8B	REV__ENSG00000273274|ENST00000609129|ZBTB8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	859.3073	858.300023	3.4226	0.002941	1.672	0.0014368	5.0946	0.0043778	859.3121746501016	98.285	0.1756	98.512	98.409	98.585	0.22776	-0.057512	-0.001687	NaN	2.8892	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19038000	+		20086	12011	9741	9780							-0.13479488633720393
LPHSEITTL	9	Unmodified	_LPHSEITTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7793151736259	2	505.779482	1009.54441	0.86196	0.00043596	-0.43632	-0.00022068	0.42563	0.00021528	505.7791449248807	32.268	0.71893	33.546	33.168	33.887	1.2782					33	24	2	0	0	0	0.051699	2	13551	13508;13551		67.344	13.768	1	2197300			20087	4569	9742	9781	23178;23179	23179					0.04002036723386482
LPHSEITTL	9	Unmodified	_LPHSEITTL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2802307009697	2	505.779482	1009.54441	0.82453	0.00041703	-1.3931	-0.00070462	-0.56861	-0.00028759	505.77837870379125	31.665	0.43208	33.49	33.27	33.702	1.8246					26	16	2	0	0	0	0.059546	1	13308	13308		64.236	22.142	1	2563100			20088	4569	9742	9781	23180	23180					0.04002036723386482
LPHTDFTL	8	Unmodified	_LPHTDFTL_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2481872439384	2	472.247818	942.481082	2.7915	0.0013183	0.14932	7.0518E-05	2.9408	0.0013888	472.2477934322172	44.731	0.34288	46.096	45.867	46.21	1.3653					24	10	3	0	0	0	0.31058	1	18720	18720		70.865	17.289	1	2095900			20089	4498	9743	9782	23181	23181					0.007540960061533042
LPHTDFTL	8	Unmodified	_LPHTDFTL_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2495605349541	2	472.247818	942.481082	2.5806	0.0012187	-0.043514	-2.0549E-05	2.5371	0.0011981	472.2479582209918	44.089	0.37835	46.033	45.799	46.177	1.9438					25	11	3	0	0	0	0.37329	2	18510	18453;18510		59.795	6.2196	1	1880800			20090	4498	9743	9782	23182;23183	23183					0.007540960061533042
LPHTPLSRPS	10	Unmodified	_LPHTPLSRPS_					0	0	0			REV__ENST00000460132.5_1_7:100853286-100853899:-|nuORF	REV__ENST00000460132.5_1_7:100853286-100853899:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.7887451052666	2	552.811648	1103.60874	1.2294	0.00067965	2.9623	0.0016376	4.1917	0.0023172	552.8142134776832	45.827	0.34202	47.797	47.631	47.973	1.9703					24	10	3	0	0	0	0.12412	1	19130	19130		21.537	9.8967	1	1130100	+		20091	13185	9744	9783	23184	23184					0.061082366001983246
LPHYLNYGL	9	Unmodified	_LPHYLNYGL_					0	0	0			REV__ENSG00000130300|ENST00000252590|PLVAP	REV__ENSG00000130300|ENST00000252590|PLVAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3317138552666	2	545.290017	1088.56548	1.7756	0.00096822	3.6138	0.0019705	5.3894	0.0029388	545.2917989797469	46.517	0.33199	48.488	48.379	48.711	1.9703					16	10	2	0	0	0	0.44535	1	19540	19540		18.135	3.2967	1	852350	+		20092	9776	9745	9784	23185	23185					0.024740468228856116
LPHYLNYGL	9	Unmodified	_LPHYLNYGL_					0	0	0			REV__ENSG00000130300|ENST00000252590|PLVAP	REV__ENSG00000130300|ENST00000252590|PLVAP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	545.290017	1088.56548	1.9922	0.0010863	1.5053	0.00082082	3.4975	0.0019072	545.2912927220119	47.005	0.28538	48.387	48.251	48.536	1.3825	-0.050038	-0.0010644	NaN	18.135	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	611890	+		20093	9776	9745	9784							0.024740468228856116
LPHYLNYGL	9	Unmodified	_LPHYLNYGL_					0	0	0			REV__ENSG00000130300|ENST00000252590|PLVAP	REV__ENSG00000130300|ENST00000252590|PLVAP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	545.290017	1088.56548	1.7756	0.00096822	3.6138	0.0019705	5.3894	0.0029388	545.2917989797469	46.517	0.33199	48.488	48.379	48.711	1.9703	0.050038	0.001235	NaN	18.135	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	852350	+		20094	9776	9745	9784							0.024740468228856116
LPIDIVLQTL	10	Unmodified	_LPIDIVLQTL_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8544799685478	2	562.849907	1123.68526	3.8443	0.0021638	1.7582	0.00098961	5.6025	0.0031534	562.8511007296615	96.885	0.14071	97.17	97.077	97.218	0.28442					7	4	2	0	0	0	0.25819	1	40779	40779		41.84	10.571	1	1502600			20095	4092	9746	9785	23186	23186					0.12836615376795635
LPIDIVLQTL	10	Unmodified	_LPIDIVLQTL_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8521606326103	2	562.849907	1123.68526	3.2598	0.0018348	2.5777	0.0014509	5.8375	0.0032856	562.850976412624	96.779	0.15804	97.085	96.975	97.133	0.3062					7	4	2	0	0	0	0.10797	1	40718	40718		62.573	6.3957	1	1503200			20096	4092	9746	9785	23187	23187					0.12836615376795635
LPIEAPIRM	9	Unmodified	_LPIEAPIRM_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3027221560478	2	520.30207	1038.58959	1.2519	0.00065139	0.24436	0.00012714	1.4963	0.00077853	520.3024285139495	52.257	0.43847	53.654	53.46	53.898	1.3966					40	13	4	0	0	0	0.010279	3	21883	21837;21883;21923		107.19	45.83	1	19596000			20097	5070	9747	9786	23188;23189;23190	23189					0.07183563984926877
LPIEAPIRM	9	Unmodified	_LPIEAPIRM_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3026000857353	2	520.30207	1038.58959	0.82238	0.00042789	0.038365	1.9961E-05	0.86074	0.00044785	520.3022542797751	51.671	0.46632	53.643	53.426	53.892	1.9722					44	14	4	0	0	0	0.029061	2	21663	21612;21663		88.954	41.205	1	19669000			20098	5070	9747	9786	23191;23192	23192					0.07183563984926877
LPIERRKPRRK	11	Unmodified	_LPIERRKPRRK_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9881469607353	4	362.987572	1447.92118	1.0375	0.00037658	-2.2419	-0.00081379	-1.2045	-0.00043721	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.0402	1	13679	13679		0.094841	0	1	559590000	+		20099	8513	9748	9787	23193	23193					0.21513985064598273
LPIERRKPRRK	11	Unmodified	_LPIERRKPRRK_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9880248904228	4	362.987572	1447.92118	-0.4714	-0.00017111	-1.3211	-0.00047955	-1.7925	-0.00065066	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.0402	1	13169	13169		0.094841	0	1	563060000	+		20100	8513	9748	9787	23194	23194					0.21513985064598273
LPIERRKPRRK	11	Unmodified	_LPIERRKPRRK_					0	0	0			REV__nc|ENSG00000007171|P35228-2|NOS2	REV__nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6470825076103	3	483.647671	1447.92118	0.73339	0.0003547	-1.9708	-0.00095319	-1.2375	-0.00059849	483.64658448701994	30.819	0.56097	32.634	32.325	32.886	1.8151					66	18	4	0	0	0	1.0402	1	13007	13007		0.094841	0	1	17468000	+		20101	8513	9748	9787	23195	23195					0.21513985064598273
LPIFFKTTWL	10	Unmodified	_LPIFFKTTWL_					0	0	0			REV__nc|ENSG00000198246|Q9BZD2-2|SLC29A3	REV__nc|ENSG00000198246|Q9BZD2-2|SLC29A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3696777224541	2	633.368267	1264.72198	1.0752	0.000681	1.8197	0.0011526	2.8949	0.0018336	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	0.88314	1	33724	33724		3.2813	0.54611	1	5927400	+		20102	11705	9749	9788	23196	23196					0.10020911993365189
LPIFPVFLKI	10	Unmodified	_LPIFPVFLKI_					0	0	0		tr|A0A7D6VNI6|A0A7D6VNI6_9CLOTRiboflavintransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_19055PE=3SV=1	tr|A0A7D6VNI6|A0A7D6VNI6_9CLOTRiboflavintransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_19055PE=3SV=1	tr|A0A7D6VNI6|A0A7D6VNI6_9CLOTRiboflavintransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_19055PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2593261599541	3	396.258127	1185.75255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.531	1	97.622	97.122	98.122	0.090881								0	0	0	0.66254	1	40809	40809		0.15932	0	1				20103	16735	9750	9789	23197	23197					0.167106903784088
LPIFSLGPSAL	11	Unmodified	_LPIFSLGPSAL_					0	0	0		nc|ENSG00000134278|Q08AE8-3|SPIRE1;nc|ENSG00000134278|Q08AE8-5|SPIRE1;nc|ENSG00000134278|Q08AE8-2|SPIRE1;ENSG00000134278|ENST00000409402|SPIRE1;ENST00000498803.5_1_18:12449639-12452543:-|nuORF	nc|ENSG00000134278|Q08AE8-3|SPIRE1	nc|ENSG00000134278|Q08AE8-3|SPIRE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.8314697146416	2	557.828975	1113.6434	1.2453	0.00069468	0.10283	5.7361E-05	1.3482	0.00075204	557.8296118205202	69.768	0.25207	70.091	69.94	70.192	0.32224					10	7	2	0	0	0	0.89563	1	29222	29222		10.074	2.1638	1	386240			20104	2605	9751	9790	23198	23198					0.09112059688277441
LPIGFLSFEL	10	Unmodified	_LPIGFLSFEL_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3231078982353	2	568.323525	1134.6325	1.9823	0.0011266	-3.1498	-0.0017901	-1.1676	-0.00066356	568.3218594992808	69.35	0.31466	71.203	71.041	71.356	1.853					18	9	2	0	0	0	0.75645	1	29141	29141		15.847	4.2069	1	2623700	+		20105	8890	9752	9791	23199	23199					0.07056657313978576
LPIIIMLG	8	Unmodified	_LPIIIMLG_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	869.5583373904228	1	869.552873	868.545597	3.0438	0.0026468	2.5347	0.002204	5.5785	0.0048508	869.5557965491578	106.63	0.14178	106.78	106.7	106.84	0.15781					17	6	3	0	0	0	0.89176	1	45701	45701		0.79363	0	1	22796000	+		20106	15435	9753	9792	23200	23200					0.10606579558589146
LPIIIMLG	8	Unmodified	_LPIIIMLG_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	869.5578491091728	1	869.552873	868.545597	3.1349	0.002726	3.0037	0.0026118	6.1386	0.0053378	869.5560409432298	106.61	0.12926	106.77	106.69	106.82	0.16174					17	6	3	0	0	0	0.89176	1	45623	45623		0.79363	0	1	40358000	+		20107	15435	9753	9792	23201	23201					0.10606579558589146
LPIIIMLG	8	Unmodified	_LPIIIMLG_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	869.552873	868.545597	2.7948	0.0024302	2.5962	0.0022576	5.391	0.0046878	869.5546420333486	106.64	0.080826	106.69	106.64	106.72	0.05455	-0.057746	-0.00019301	NaN	0.79363	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3901500	+		20108	15435	9753	9792							0.10606579558589146
LPIIIMLG	8	Unmodified	_LPIIIMLG_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	869.552873	868.545597	3.0438	0.0026468	2.5347	0.002204	5.5785	0.0048508	869.5557965491578	106.63	0.14178	106.78	106.7	106.84	0.15781	0.033465	-0.00024653	NaN	0.79363	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22796000	+		20109	15435	9753	9792							0.10606579558589146
LPIIIMLG	8	Unmodified	_LPIIIMLG_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	869.552873	868.545597	3.1349	0.002726	3.0037	0.0026118	6.1386	0.0053378	869.5560409432298	106.61	0.12926	106.77	106.69	106.82	0.16174	0.024281	0.00016126	NaN	0.79363	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40358000	+		20110	15435	9753	9792							0.10606579558589146
LPIKDGKLVF	10	Unmodified	_LPIKDGKLVF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3547241091728	2	565.352617	1128.69068	1.9571	0.0011065	0.96019	0.00054285	2.9173	0.0016493	565.353489516708	43.566	0.21474	44.92	44.795	45.01	1.3536					9	6	2	0	0	0	0.1773	1	18270	18270		51.415	26.741	1	806490			20111	594	9754	9793	23202	23202					0.13148338959263128
LPIKDGKLVF	10	Unmodified	_LPIKDGKLVF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2379638552666	3	377.237504	1128.69068	1.6052	0.00060553	-1.2697	-0.00047897	0.33549	0.00012656	377.23689468742157	42.886	0.35855	44.808	44.601	44.96	1.9211					24	11	3	0	0	0	0.34844	1	17966	17966		36.395	18.532	1	2504400			20112	594	9754	9793	23203	23203					0.13148338959263128
LPIKDGKLVF	10	Unmodified	_LPIKDGKLVF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000527897.1_1_11:64953408-64953522:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3531371951103	2	565.352617	1128.69068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.888	1	44.809	44.309	45.309	1.9211								0	0	0	0.31219	1	17976	17976		37.075	12.401	1				20113	594	9754	9793	23204	23204					0.13148338959263128
LPIKRRRP	8	Unmodified	_LPIKRRRP_					0	0	0			REV__ENST00000515156.2_1_5:68927792-68932223:+|nuORF	REV__ENST00000515156.2_1_5:68927792-68932223:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.7364684939384	3	345.901449	1034.68252	0.1056	3.6529E-05	-3.3117	-0.0011455	-3.2061	-0.001109	346.2350179324529	23.997	0.43346	25.238	25.114	25.547	1.241					18	13	2	0	0	0	2.3239	1	10160	10160		0.40072	0	1	368700	+		20114	13594	9755	9794	23205	23205					0.1665624955317071
LPILIRHQPP	10	Unmodified	_LPILIRHQPP_					0	0	0		ENST00000441955.2_2_7:27779753-27779975:-|nuORF	ENST00000441955.2_2_7:27779753-27779975:-|nuORF	ENST00000441955.2_2_7:27779753-27779975:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	592.3054687380791	2	592.369133	1182.72371	3.9542	0.0023423	3.7754	0.0022364	7.7296	0.0045788	592.3711807409317	81.838	0.34705	83.508	83.387	83.734	1.67					19	10	3	0	0	0	0.12484	1	34381	34381		7.2892	5.445	1	927290			20115	6560	9756	9795	23206	23206					0.13965965801980929
LPILLARKVP	10	Unmodified	_LPILLARKVP_					0	0	0		nc|ENSG00000148343|Q7L4E1-2|MIGA2;nc|ENSG00000148343|Q7L4E1-3|MIGA2;ENSG00000148343|ENST00000684074|MIGA2;ENST00000474534.1_1_9:131798902-131809484:+|nuORF	nc|ENSG00000148343|Q7L4E1-2|MIGA2	nc|ENSG00000148343|Q7L4E1-2|MIGA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3831664919853	2	560.384251	1118.75395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.75	1	101.94	101.44	102.44	0.19076								0	0	0	0.66237	1	42781	42781		0.45834	0	1				20116	3205	9757	9796	23207	23207					0.19932324467163198
LPIMESNFF	9	Unmodified	_LPIMESNFF_					0	0	0		NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	548.8251830935478	2	549.270435	1096.52632	1.2077	0.00066336	1.0299	0.00056571	2.2376	0.0012291	549.2709502345583	67.05	0.24992	68.939	68.828	69.078	1.8889					9	7	2	0	0	0	0.11463	1	28180	28180		7.9102	1.187	1	1195600			20117	8035	9758	9797	23208	23208					-0.01808421522991921
LPIMESNFF	9	Unmodified	_LPIMESNFF_					0	0	0		NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	NDUFB11|p.C141F|1|0.12|ENSG00000147123|chrX:47142357-47142357|C/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	549.270435	1096.52632	1.6093	0.00088397	0.52129	0.00028633	2.1306	0.0011703	549.2714336287013	67.482	0.24611	68.86	68.789	69.035	1.3778	-0.039397	-0.00048356	NaN	7.9102	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607410			20118	8035	9758	9797							-0.01808421522991921
LPINGNGKQ	9	Unmodified	_LPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.7646972537041	2	470.764166	939.513779	0.95903	0.00045148	0.33022	0.00015546	1.2893	0.00060693	470.76417497449665	13.508	0.56094	13.607	13.343	13.904	0.09944					19	17	2	0	0	0	0.10294	2	5534	5534;5649		48.346	19.137	1	674010			20119	1049	9759	9798	23209;23210	23209					0.04160303129003751
LPINGNGKQ	9	Unmodified	_LPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7644531130791	2	470.764166	939.513779	0.46821	0.00022042	0.86236	0.00040597	1.3306	0.00062639	470.76452186694326	12.717	0.39436	13.505	13.275	13.669	0.78751					16	12	2	0	0	0	0.045797	1	5284	5284		71.134	7.5707	1	833890			20120	1049	9759	9798	23211	23211					0.04160303129003751
LPINGNGKQ	9	Unmodified	_LPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7660705447197	2	470.764166	939.513779	0.4818	0.00022681	1.2587	0.00059257	1.7405	0.00081938	470.7645385384356	13.039	0.25819	13.867	13.742	14	0.82789					16	10	3	0	0	0	0.059546	1	5402	5402		64.236	0.67347	1	817340			20121	1049	9759	9798	23212	23212					0.04160303129003751
LPINVVAPPV	10	Unmodified	_LPINVVAPPV_					0	0	0		ENST00000005259.8_2_7:107220481-107220637:+|nuORF	ENST00000005259.8_2_7:107220481-107220637:+|nuORF	ENST00000005259.8_2_7:107220481-107220637:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.2825195193291	2	509.81841	1017.62227	2.9137	0.0014854	0.33418	0.00017037	3.2478	0.0016558	509.81926052875394	76.609	0.12781	77.903	77.825	77.952	1.2938					5	3	2	0	0	0	0.12484	1	32132	32132		11.64	3.7301	1	581060			20122	5493	9760	9799	23213	23213					0.11416094379410424
LPIPFDYKK	9	Unmodified	_LPIPFDYKK_					0	0	0			REV__ENSG00000185056|ENST00000340147|C5orf47	REV__ENSG00000185056|ENST00000340147|C5orf47	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2166625857353	3	374.21822	1119.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.353	1	93.521	93.021	94.021	0.16835								0	0	0	0.42693	1	39082	39082		0.26902	0.033176	1		+		20123	11444	9761	9800	23214	23214					0.07780077033839916
LPISKMDFP	9	Unmodified	_LPISKMDFP_					0	0	0			REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	REV__nc|ENSG00000158623|Q9UBF2-2|COPG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2817260622978	2	524.280803	1046.54705	2.6472	0.0013879	-3.0102	-0.0015782	-0.36298	-0.0001903	524.2805137782614	72.063	1.6506	73.887	73.129	74.779	1.824					132	52	6	0	0	0	0.54523	1	30218	30218		13.508	0.97634	1	8531400	+		20124	10559	9762	9801	23215	23215					0.025641688566793164
LPISVPLRWA	10	Unmodified	_LPISVPLRWA_					0	0	0			REV__nc|ENSG00000131188|Q8TB68-2|PRR7	REV__nc|ENSG00000131188|Q8TB68-2|PRR7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	384.2960998415947	3	384.569365	1150.68626	-0.11798	-4.5372E-05	2.601	0.0010003	2.4831	0.00095491	384.57032985271803	80.207	0.84161	80.207	79.918	80.76	0					72	26	4	0	0	0	0.12559	1	33376	33376		0.77653	0.50751	1	4884800	+		20125	8330	9763	9802	23216	23216					0.11694874536351563
LPIYSNPML	9	Unmodified	_LPIYSNPML_					0	0	0		tr|A0A553SSI5|A0A553SSI5_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_03200PE=4SV=1	tr|A0A553SSI5|A0A553SSI5_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_03200PE=4SV=1	tr|A0A553SSI5|A0A553SSI5_NIACIExtracellularsolute-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_03200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2827636599541	2	524.280803	1046.54705	2.9138	0.0015277	-2.7205	-0.0014263	0.19339	0.00010139	524.2808144131709	72.394	1.7113	73.723	73.141	74.853	1.3297					141	54	5	0	0	0	0.44535	1	30518	30518		18.135	2.3668	1	4134300			20126	16616	9764	9803	23217	23217					0.025641688566793164
LPKGTEDVPPK	11	Unmodified	_LPKGTEDVPPK_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2239562869072	3	394.223923	1179.64994	0.5746	0.00022652	1.0629	0.00041902	1.6375	0.00064555	394.22403754183046	19.102	0.21662	19.296	19.139	19.356	0.19342					13	6	3	0	0	0	0.91768	1	7949	7949		4.4062	0.52982	1	451850	+		20127	8871	9765	9804	23218	23218					0.06729952848968423
LPKKRRPL	8	Unmodified	_LPKKRRPL_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	336.5667602419853	3	336.566066	1006.67637	0.17997	6.0571E-05	1.6513	0.00055576	1.8312	0.00061633	336.56645469876344	22.287	0.29925	22.51	22.374	22.674	0.223					20	9	3	0	0	0	0.89187	1	9322	9322		0.40072	0	1	4724800	+		20128	9960	9766	9805	23219	23219					0.17329731321649433
LPKKRRPL	8	Unmodified	_LPKKRRPL_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	336.1896545290947	3	336.566066	1006.67637	0.077293	2.6014E-05	2.6597	0.00089517	2.737	0.00092118	336.56671229933505	24.6	0.15273	26.285	26.238	26.391	1.6845					5	4	2	0	0	0	2.3239	1	10285	10285		0.40072	0	1	382340	+		20129	9960	9766	9805	23220	23220					0.17329731321649433
LPKKRRPL	8	Unmodified	_LPKKRRPL_					0	0	0			REV__nc|ENSG00000135913|Q86T82-2|USP37	REV__nc|ENSG00000135913|Q86T82-2|USP37	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	336.566066	1006.67637	0.39063	0.00013147	1.003	0.00033757	1.3936	0.00046904	336.5680861865806	26.227	0.23868	26.488	26.324	26.563	0.26173	0.10182	-0.0010843	NaN	0.40072	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342620	+		20130	9960	9766	9805							0.17329731321649433
LPKMNSKRQRI	11	Unmodified	_LPKMNSKRQRI_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|5|fusion;VCL-ADK|6|fusion;VCL-ADK|8|fusion;KAT6B-ADK|1|fusion;VCL-ADK|9|fusion;VCL-ADK|11|fusion;VCL-ADK|7|fusion;nc|ENSG00000156110|P55263-4|ADK;nc|ENSG00000156110|P55263-2|ADK;ENSG00000156110|ENST00000539909|ADK;VCL-ADK|10|fusion;nc|ENSG00000156110|P55263-3|ADK	VCL-ADK|12|fusion;VCL-ADK|9|fusion	VCL-ADK|9|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9095336794853	2	685.906088	1369.79762	3.4314	0.0023536	1.8604	0.0012761	5.2918	0.0036297	685.9076077523447	82.323	1.4076	83.536	82.728	84.136	1.2125					65	44	2	0	0	0	0.97491	1	34535	34535		5.2969	1.7004	1	1629800			20131	17353;17352	9767	9806	23221	23221					0.12751565901976392
LPKMNSKRQRI	11	Unmodified	_LPKMNSKRQRI_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|5|fusion;VCL-ADK|6|fusion;VCL-ADK|8|fusion;KAT6B-ADK|1|fusion;VCL-ADK|9|fusion;VCL-ADK|11|fusion;VCL-ADK|7|fusion;nc|ENSG00000156110|P55263-4|ADK;nc|ENSG00000156110|P55263-2|ADK;ENSG00000156110|ENST00000539909|ADK;VCL-ADK|10|fusion;nc|ENSG00000156110|P55263-3|ADK	VCL-ADK|12|fusion;VCL-ADK|9|fusion	VCL-ADK|9|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	685.906088	1369.79762	2.2313	0.0015305	3.9113	0.0026828	6.1426	0.0042132	685.9088979398654	82.982	1.3835	83.252	82.573	83.956	0.27029	-0.12646	0.0013421	NaN	5.2969	122	44	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1896900			20132	17353;17352	9767	9806							0.12751565901976392
LPKQHLQR	8	Unmodified	_LPKQHLQR_					0	0	0		nc|ENSG00000162894|O60667-3|FCMR	nc|ENSG00000162894|O60667-3|FCMR	nc|ENSG00000162894|O60667-3|FCMR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.8458740115166	2	510.309075	1018.6036	2.1394	0.0010918	-1.8612	-0.00094978	0.27822	0.00014198	510.30828980365385	66.798	0.49953	68.186	68.027	68.526	1.3888					23	15	2	0	0	0	2.3239	1	28109	28109		9.3474	0	1	851750			20133	7908	9768	9807	23222	23222					0.09503977528208907
LPKRAGRLAW	10	Unmodified	_LPKRAGRLAW_					0	0	0			REV__ENST00000520944.5_1_8:67834940-67837798:-|nuORF	REV__ENST00000520944.5_1_8:67834940-67837798:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3573486208916	2	584.359099	1166.70365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.924	1	77.24	76.74	77.74	0.31653								0	0	0	0.66155	1	32171	32171		1.8442	0.19162	1		+		20134	13628	9769	9808	23223	23223					0.12696214862012312
LPKRMVLLPV	10	Unmodified	_LPKRMVLLPV_					0	0	0		nc|ENSG00000165209|Q96SI9-2|STRBP;ENSG00000165209|ENST00000348403|STRBP	nc|ENSG00000165209|Q96SI9-2|STRBP	nc|ENSG00000165209|Q96SI9-2|STRBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3782226443291	2	583.378112	1164.74167	0.97616	0.00056947	-0.60294	-0.00035174	0.37322	0.00021773	583.3776989755997	29.295	0.48449	29.574	29.38	29.865	0.2793					29	15	3	0	0	0	0.89803	1	12268	12268		1.6526	0	1	3020900			20135	3821	9770	9809	23224	23224					0.16588964732477507
LPKRVIVQRIL	11	Unmodified	_LPKRVIVQRIL_					0	0	0		ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4801208376884	4	334.48032	1333.89217	-2.4259	-0.00081142	0.091848	3.0721E-05	-2.3341	-0.0007807	334.48107277347134	24.719	1.9579	24.719	24.367	26.325	0					284	63	6	0	0	0	1.039	3	10599	10599;10638;10755		0.45452	0	1	149700000			20136	2701	9771	9810	23225;23226;23227	23225					0.2385844771565644
LPKRWHGYF	9	Unmodified	_LPKRWHGYF_					0	0	0			REV__ENSG00000102794|ENST00000377462|ACOD1	REV__ENSG00000102794|ENST00000377462|ACOD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1805602908134	3	401.885576	1202.6349	1.899	0.00076318	2.8954	0.0011636	4.7944	0.0019268	402.21893864716463	45.299	0.19471	46.664	46.563	46.758	1.3653					11	5	3	0	0	0	0.11938	1	18999	18999		1.1933	0.12188	1	775750	+		20137	9083	9772	9811	23228	23228					0.04168550562303608
LPKVLSGP	8	Unmodified	_LPKVLSGP_					0	0	0		ENST00000397412.7_1_16:1706383-1706581:+|nuORF	ENST00000397412.7_1_16:1706383-1706581:+|nuORF	ENST00000397412.7_1_16:1706383-1706581:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.1794616580009	2	405.757821	809.501089	0.51889	0.00021054	0.97476	0.00039552	1.4937	0.00060606	405.7582137166488	16.163	0.17663	16.293	16.178	16.355	0.13022					8	5	2	0	0	0	2.3239	1	6688	6688		4.756	0	1	149700			20138	6310	9773	9812	23229	23229					0.08871891736760062
LPLAFLTAMQ	10	Unmodified	_LPLAFLTAMQ_					0	0	0		nc|ENSG00000149547|O14681-3|EI24;ENSG00000149547|ENST00000278903|EI24	nc|ENSG00000149547|O14681-3|EI24	nc|ENSG00000149547|O14681-3|EI24	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.2802001833916	2	552.809728	1103.6049	1.8946	0.0010473	3.8852	0.0021478	5.7798	0.0031951	552.8122691345211	43.732	0.18151	45.086	45.01	45.191	1.3536					9	5	2	0	0	0	0.12437	1	18314	18314		18.146	3.3081	1	482690			20139	3245	9774	9813	23230	23230					0.05724430782106538
LPLALGLAL	9	Unmodified	_LPLALGLAL_					0	0	0		ENSG00000175315|ENST00000312134|CST6	ENSG00000175315|ENST00000312134|CST6	ENSG00000175315|ENST00000312134|CST6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	880.5873901247978	1	880.586616	879.57934	4.0605	0.0035757	-0.74387	-0.00065504	3.3167	0.0029206	880.5858628282891	91.856	0.27791	92.793	92.678	92.955	0.93623					14	8	2	0	0	0	0.035716	1	38704	38704		79.935	0	1	1831700			20140	4368	9775	9814	23231	23231					0.13473324321967084
LPLALGLAL	9	Unmodified	_LPLALGLAL_					0	0	0		ENSG00000175315|ENST00000312134|CST6	ENSG00000175315|ENST00000312134|CST6	ENSG00000175315|ENST00000312134|CST6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	880.5857421755791	1	880.586616	879.57934	3.2132	0.0028295	-1.0079	-0.0008875	2.2053	0.001942	880.5848474494851	91.377	0.26956	92.743	92.597	92.867	1.366					15	8	2	0	0	0	0.051525	1	38466	38466		67.413	0	1	2112100			20141	4368	9775	9814	23232	23232					0.13473324321967084
LPLAPRPGPHL	11	Unmodified	_LPLAPRPGPHL_					0	0	0			REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.2913696169853	2	584.353483	1166.69241	2.4479	0.0014304	2.4812	0.0014499	4.9291	0.0028803	584.3546418721431	59.579	0.34581	60.998	60.831	61.176	1.4196					23	10	3	0	0	0	0.14187	1	24973	24973		17.113	0	1	1720000	+		20142	9494	9776	9815	23233	23233					0.11573392767877522
LPLAPRPGPHL	11	Unmodified	_LPLAPRPGPHL_					0	0	0			REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	584.2914306521416	2	584.353483	1166.69241	2.4689	0.0014427	3.716	0.0021714	6.1849	0.0036142	584.3555086896413	59.097	0.34773	61.067	60.908	61.256	1.969					20	10	3	0	0	0	0.14187	1	24790	24790		17.113	0	1	1732300	+		20143	9494	9776	9815	23234	23234					0.11573392767877522
LPLATAGFAML	11	Unmodified	_LPLATAGFAML_					0	0	0		tr|A0A553STV5|A0A553STV5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_05740PE=3SV=1	tr|A0A553STV5|A0A553STV5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_05740PE=3SV=1	tr|A0A553STV5|A0A553STV5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_05740PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.2781860232353	2	552.809728	1103.6049	1.8798	0.0010392	3.5955	0.0019877	5.4753	0.0030268	552.8118451133182	43.126	0.18351	45.057	44.999	45.183	1.931					7	5	2	0	0	0	0.14187	1	18066	18066		17.113	2.2746	1	459000			20144	16666	9777	9816	23235	23235					0.05724430782106538
LPLEISGSLL	10	Unmodified	_LPLEISGSLL_					0	0	0			REV__ENST00000392750.6_2_3:167402023-167402092:-|nuORF	REV__ENST00000392750.6_2_3:167402023-167402092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3138305544853	2	521.313158	1040.61176	1.5511	0.0008086	-1.0229	-0.00053327	0.52815	0.00027533	521.3124836089783	48.466	0.36708	49.854	49.681	50.048	1.388					27	11	3	0	0	0	0.24174	1	20258	20258		43.858	0	1	4909600	+		20145	12802	9778	9817	23236	23236					0.09308066934318049
LPLEISGSLL	10	Unmodified	_LPLEISGSLL_					0	0	0			REV__ENST00000392750.6_2_3:167402023-167402092:-|nuORF	REV__ENST00000392750.6_2_3:167402023-167402092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3117553591728	2	521.313158	1040.61176	2.3169	0.0012078	-2.1062	-0.001098	0.21077	0.00010988	521.3118701099103	47.998	0.30858	49.975	49.775	50.084	1.9772					22	9	3	0	0	0	0.11481	1	20120	20120		61.357	0	1	4857200	+		20146	12802	9778	9817	23237	23237					0.09308066934318049
LPLFVFIEV	9	Unmodified	_LPLFVFIEV_					0	0	0			REV__ENST00000394054.6_1_3:101579377-101579524:+|nuORF	REV__ENST00000394054.6_1_3:101579377-101579524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3234741091728	2	538.823161	1075.63177	1.7853	0.00096196	-3.5209	-0.0018972	-1.7356	-0.0009352	539.3227267870791	54.491	0.2495	54.491	54.346	54.595	0					13	8	2	0	0	0	0.44535	1	22714	22714		18.135	0	1	713190	+		20147	12824	9779	9818	23238	23238					0.09697862664938839
LPLFVFIEV	9	Unmodified	_LPLFVFIEV_					0	0	0			REV__ENST00000394054.6_1_3:101579377-101579524:+|nuORF	REV__ENST00000394054.6_1_3:101579377-101579524:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	538.823161	1075.63177	1.7853	0.00096196	-3.5209	-0.0018972	-1.7356	-0.0009352	539.3227267870791	54.491	0.2495	54.491	54.346	54.595	0	0	0	NaN	18.135	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	713190	+		20148	12824	9779	9818							0.09697862664938839
LPLILLRII	9	Unmodified	_LPLILLRII_					0	0	0			REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1920654177666	2	532.38372	1062.75289	3.877	0.002064	-2.4994	-0.0013306	1.3776	0.0007334	532.3831390875384	96.732	0.1233	97.016	96.954	97.077	0.28442					7	3	3	0	0	0	0.11109	1	40702	40702		9.3474	0	1	609120	+		20149	15394	9780	9819	23239	23239					0.22402110098255434
LPLILLRII	9	Unmodified	_LPLILLRII_					0	0	0			REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1926147341728	2	532.38372	1062.75289	3.5153	0.0018715	-1.0707	-0.00057	2.4446	0.0013015	532.3837365632323	96.611	0.12369	96.917	96.851	96.975	0.3062					5	3	2	0	0	0	0.116	1	40644	40644		9.3474	0	1	569530	+		20150	15394	9780	9819	23240	23240					0.22402110098255434
LPLILLRII	9	Unmodified	_LPLILLRII_					0	0	0			REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	532.38372	1062.75289	1.5039	0.00080067	-2.455	-0.001307	-0.95108	-0.00050634	532.8839690053669	97.065	0.092628	97.065	96.988	97.08	0	0.054997	-0.00087778	NaN	9.3474	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1439300	+		20151	15394	9780	9819							0.22402110098255434
LPLILLRII	9	Unmodified	_LPLILLRII_					0	0	0			REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	REV__tr|A0A7D6VQW4|A0A7D6VQW4_9CLOTMembraneproteininsertaseYidCOS=ClostridiumintestinaleOX=36845GN=yidCPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	532.38372	1062.75289	2.8293	0.0015063	1.3952	0.00074277	4.2245	0.0022491	532.3845481433127	96.935	0.096565	97.04	96.974	97.07	0.105	0.030581	0.0032218	NaN	9.3474	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	909920	+		20152	15394	9780	9819							0.22402110098255434
LPLIPVAQAQW	11	Unmodified	_LPLIPVAQAQW_					0	0	0			REV__nc|ENSG00000167311|Q96L15-2|ART5	REV__nc|ENSG00000167311|Q96L15-2|ART5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3613159060478	2	618.360973	1234.70739	2.9582	0.0018292	-1.953	-0.0012077	1.0052	0.00062155	618.3598513064953	100.56	0.13886	100.74	100.68	100.82	0.18047					9	4	3	0	0	0	0.66633	1	42323	42323		19.257	0	1	4914000	+		20153	10862	9781	9820	23241	23241					0.09942839845211893
LPLIPVAQAQW	11	Unmodified	_LPLIPVAQAQW_					0	0	0			REV__nc|ENSG00000167311|Q96L15-2|ART5	REV__nc|ENSG00000167311|Q96L15-2|ART5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	618.360973	1234.70739	1.5462	0.00095612	-0.6974	-0.00043124	0.84881	0.00052487	618.3611233486612	100.68	0.23965	100.68	100.6	100.84	0	-0.017001	0.0011494	NaN	19.257	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1953200	+		20154	10862	9781	9820							0.09942839845211893
LPLIPVAQAQW	11	Unmodified	_LPLIPVAQAQW_					0	0	0			REV__nc|ENSG00000167311|Q96L15-2|ART5	REV__nc|ENSG00000167311|Q96L15-2|ART5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	618.360973	1234.70739	2.6501	0.0016387	-0.73218	-0.00045275	1.9179	0.0011859	618.3606560862498	100.6	0.18571	100.68	100.6	100.78	0.072716	-0.025372	0.0011064	NaN	19.257	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1503500	+		20155	10862	9781	9820							0.09942839845211893
LPLIPVAQAQW	11	Unmodified	_LPLIPVAQAQW_					0	0	0			REV__nc|ENSG00000167311|Q96L15-2|ART5	REV__nc|ENSG00000167311|Q96L15-2|ART5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	618.360973	1234.70739	2.9582	0.0018292	-1.953	-0.0012077	1.0052	0.00062155	618.3598513064953	100.56	0.13886	100.74	100.68	100.82	0.18047	0.042006	-0.00040345	NaN	19.257	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4914000	+		20156	10862	9781	9820							0.09942839845211893
LPLIPVAQAQW	11	Unmodified	_LPLIPVAQAQW_					0	0	0			REV__nc|ENSG00000167311|Q96L15-2|ART5	REV__nc|ENSG00000167311|Q96L15-2|ART5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	618.360973	1234.70739	2.9712	0.0018373	-3.7313	-0.0023073	-0.76013	-0.00047004	618.3591273287946	100.5	0.21001	100.7	100.63	100.84	0.20527	0.00036606	-0.0026027	NaN	19.257	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3613400	+		20157	10862	9781	9820							0.09942839845211893
LPLKTEHKQFL	11	Unmodified	_LPLKTEHKQFL_					0	0	0		nc|ENSG00000068971|Q15173-2|PPP2R5B;ENSG00000068971|ENST00000164133|PPP2R5B	nc|ENSG00000068971|Q15173-2|PPP2R5B	nc|ENSG00000068971|Q15173-2|PPP2R5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9339172244072	3	451.934484	1352.78162	2.1825	0.00098634	-2.3515	-0.0010627	-0.16896	-7.6359E-05	451.93377716668147	84.549	1.375	85.708	85.118	86.493	1.159					84	45	3	0	0	0	1.0362	1	35665	35665		0.45452	0.046251	1	4016500			20158	838	9782	9821	23242	23242					0.1193418293673858
LPLLFPLFFT	10	Unmodified	_LPLLFPLFFT_					0	0	0		ENST00000486986.6_1_1:151752280-151755498:-|nuORF	ENST00000486986.6_1_1:151752280-151755498:-|nuORF	ENST00000486986.6_1_1:151752280-151755498:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3613159060478	2	604.359911	1206.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.035	1	88.126	87.626	88.626	1.0918								0	0	0	0.65836	1	36707	36707		6.7232	0	1				20159	6872	9783	9822	23243	23243					0.11018411107420434
LPLLLIVIDL	10	Unmodified	_LPLLLIVIDL_					0	0	0		ENSG00000163701|ENST00000383814|IL17RE;nc|ENSG00000163701|Q8NFR9-3|IL17RE;nc|ENSG00000163701|Q8NFR9-5|IL17RE;ENST00000489181.5_1_3:9944520-9950978:+|nuORF	ENSG00000163701|ENST00000383814|IL17RE	ENSG00000163701|ENST00000383814|IL17RE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3806640505791	2	561.380843	1120.74713	2.6711	0.0014995	-3.0834	-0.001731	-0.41231	-0.00023146	561.3789292823939	107.52	0.3409	107.57	107.48	107.82	0.052452					47	17	5	0	0	0	0.89803	1	45984	45984		1.6526	0	1	373030000			20160	3715	9784	9823	23244	23244					0.1915896679593061
LPLLLLLLLM	10	Unmodified	_LPLLLLLLLM_					0	0	0			REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3960449099541	2	576.395439	1150.77632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.79	1	82.07	81.57	82.57	0.2802								0	0	0	0.66264	1	34198	34198		0	0	1		+		20161	9168	9785	9824	23245	23245					0.20696787820565987
LPLLPCPPSCP	11	Unmodified	_LPLLPCPPSCP_					0	0	0			REV__NPLOC4-HEXDC|1|fusion	REV__NPLOC4-HEXDC|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.7965576052666	2	568.795763	1135.57697	1.6558	0.0009418	-0.57849	-0.00032904	1.0773	0.00061276	568.7957195809341	53.524	0.82645	53.524	53.2	54.027	0					78	27	4	0	0	0	0.50052	1	22312	22312		24.021	1.2843	1	13806000	+		20162	14484	9786	9825	23246	23246					0.014607845303544309
LPLLPCPPSCP	11	Unmodified	_LPLLPCPPSCP_					0	0	0			REV__NPLOC4-HEXDC|1|fusion	REV__NPLOC4-HEXDC|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.7960082888603	2	568.795763	1135.57697	0.33422	0.0001901	-1.0931	-0.00062173	-0.75886	-0.00043163	568.7952169096159	51.376	0.95802	53.351	53.03	53.988	1.9753					108	33	5	0	0	0	0.31972	2	21570	21570;21610		30.637	5.2372	1	32317000	+		20163	14484	9786	9825	23247;23248	23247					0.014607845303544309
LPLNVEDCI	9	Unmodified	_LPLNVEDCI_					0	0	0			REV__ENSG00000149761|ENST00000279206|NUDT22	REV__ENSG00000149761|ENST00000279206|NUDT22	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.7920715212822	2	508.260068	1014.50558	2.075	0.0010546	-3.0513	-0.0015508	-0.97632	-0.00049622	508.258755960354	54.494	0.25662	55.898	55.707	55.964	1.4048					12	7	2	0	0	0	0.10306	1	22791	22791		13.508	0	1	1061600	+		20164	10375	9787	9826	23249	23249					-0.0010901190264576144
LPLPDKEFL	9	Unmodified	_LPLPDKEFL_					0	0	0		nc|ENSG00000112964|P10912-4|GHR;ENSG00000112964|ENST00000230882|GHR	nc|ENSG00000112964|P10912-4|GHR	nc|ENSG00000112964|P10912-4|GHR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1635009646416	2	536.307875	1070.6012	2.084	0.0011177	2.8408	0.0015235	4.9248	0.0026412	536.3102499782377	82.57	0.30675	82.57	82.4	82.706	0					16	9	2	0	0	0	0.11719	1	34366	34366		1.6526	1.0511	1	1197600			20165	1800	9788	9827	23250	23250					0.06872084279893897
LPLPLPCEPS	10	Unmodified	_LPLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.2870361208916	2	533.286085	1064.55762	1.7045	0.00090901	-0.29877	-0.00015933	1.4058	0.00074968	533.2860456271736	66.562	1.0993	66.562	66.189	67.288	0					102	34	4	0	0	0	0.48057	5	27727	27689;27727;27765;27804;27860		28.487	8.0332	1	9088500	+		20166	12585	9789	9828	23251;23252;23253;23254;23255	23252					0.02792151511107477
LPLPLPCEPS	10	Unmodified	_LPLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.2867919802666	2	533.286085	1064.55762	1.9888	0.0010606	-0.581	-0.00030984	1.4078	0.00075077	533.2859421519642	66.692	1.0985	67.016	66.432	67.531	0.32449					101	35	4	0	0	0	0.48057	2	27842	27842;27880		28.487	8.0332	1	9438800	+		20167	12585	9789	9828	23256;23257	23256					0.02792151511107477
LPLPLPCEPS	10	Unmodified	_LPLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2878295779228	2	533.286085	1064.55762	2.4332	0.0012976	-0.34271	-0.00018276	2.0905	0.0011148	533.2859768985179	65.721	1.0631	67.12	66.881	67.944	1.3989					52	34	2	0	0	0	0.25611	3	27612	27563;27612;27653		42.095	9.9776	1	12362000	+		20168	12585	9789	9828	23258;23259;23260	23259					0.02792151511107477
LPLPLPCEPS	10	Unmodified	_LPLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2872192263603	2	533.286085	1064.55762	2.0281	0.0010815	-0.49954	-0.0002664	1.5285	0.00081515	533.2857405982548	65.464	0.91926	67.372	67.063	67.982	1.9085					64	29	3	0	0	0	0.25611	2	27428	27428;27468		42.095	9.9776	1	11921000	+		20169	12585	9789	9828	23261;23262	23261					0.02792151511107477
LPLPLPCEPS	10	Unmodified	_LPLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	533.286085	1064.55762	2.4332	0.0012976	-0.34271	-0.00018276	2.0905	0.0011148	533.2859768985179	65.721	1.0631	67.12	66.881	67.944	1.3989	-0.049318	0.00014459	NaN	42.095	52	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12362000	+		20170	12585	9789	9828							0.02792151511107477
LPLPTITT	8	Unmodified	_LPLPTITT_					0	0	0			REV__ENST00000269228.9_1_18:21128039-21131656:-|nuORF	REV__ENST00000269228.9_1_18:21128039-21131656:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	855.5209838747978	1	855.518596	854.51132	2.4976	0.0021367	-3.2288	-0.0027623	-0.73119	-0.00062555	855.5156550006983	72.016	0.30066	73.84	73.665	73.966	1.824					13	9	2	0	0	0	0.88504	1	30190	30190		5.7604	0	1	1916000	+		20171	12228	9790	9829	23263	23263					0.07824454671310832
LPLPTITT	8	Unmodified	_LPLPTITT_					0	0	0			REV__ENST00000269228.9_1_18:21128039-21131656:-|nuORF	REV__ENST00000269228.9_1_18:21128039-21131656:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	855.518596	854.51132	2.4976	0.0021367	-3.2288	-0.0027623	-0.73119	-0.00062555	855.5156550006983	72.016	0.30066	73.84	73.665	73.966	1.824	0.20536	0.00048912	NaN	5.7604	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1916000	+		20172	12228	9790	9829							0.07824454671310832
LPLPVVQLL	9	Unmodified	_LPLPVVQLL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	330.4709045290947	3	331.223194	990.647754	1.9083	0.00063206	3.351	0.0011099	5.2592	0.001742	331.22452533292216	47.771	0.28092	49.747	49.555	49.836	1.976					14	8	2	0	0	0	0.11954	1	19930	19930		0.26902	0	1	698670			20173	664	9791	9830	23264	23264					0.15205568901853894
LPLRLILLRK	10	Unmodified	_LPLRLILLRK_					0	0	0		ENST00000507606.2_1_7:135359974-135360067:+|nuORF	ENST00000507606.2_1_7:135359974-135360067:+|nuORF	ENST00000507606.2_1_7:135359974-135360067:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2974731326103	3	412.295576	1233.8649	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.785	1	22.785	22.285	23.285	0								0	0	0	0.66255	1	9489	9489		0.13989	0.13989	1				20174	7010	9792	9831	23265	23265					0.2573196417524741
LPLRMSEPL	9	Unmodified	_LPLRMSEPL_					0	0	0		ENSG00000176953|ENST00000320805|NFATC2IP	ENSG00000176953|ENST00000320805|NFATC2IP	ENSG00000176953|ENST00000320805|NFATC2IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3005248904228	2	528.299527	1054.5845	0.91972	0.00048589	-0.20568	-0.00010866	0.71404	0.00037723	528.2993553103149	35.163	0.17329	36.981	36.855	37.028	1.8176					20	15	2	0	0	0	0.15635	1	14744	14744		37.974	3.5723	1	2588900			20175	4425	9793	9832	23266	23266					0.05939260122295309
LPLVTILGLP	10	Unmodified	_LPLVTILGLP_					0	0	0		nc|ENSG00000086758|Q7Z6Z7-2|HUWE1;nc|ENSG00000086758|Q7Z6Z7-3|HUWE1;ENSG00000086758|ENST00000262854|HUWE1;ENST00000218328.12_1_X:53611240-53681066:-|nuORF	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.4858276247978	3	345.898599	1034.67397	0.45365	0.00015692	4.1371	0.001431	4.5907	0.0015879	345.89958863974437	25.263	0.6779	25.515	25.335	26.013	0.25197					28	21	2	0	0	0	0.1256	1	10744	10744		0.62683	0	1	418990			20176	1076	9794	9833	23267	23267					0.15801838073343788
LPLYIKPM	8	Unmodified	_LPLYIKPM_					0	0	0			REV__ENST00000428888.1_1_2:166702523-166702559:-|nuORF	REV__ENST00000428888.1_1_2:166702523-166702559:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7918578982353	2	487.790807	973.56706	1.8361	0.00089565	-0.21595	-0.00010534	1.6202	0.00079031	487.7906861622021	64.493	2.2195	64.493	63.773	65.992	0					95	69	2	0	0	0	0.88587	5	26768	26768;26872;26966;27123;27277		5.2307	0	1	1453800	+		20177	13013	9795	9834	23268;23269;23270;23271;23272	23268					0.07921964587285402
LPLYIKPM	8	Unmodified	_LPLYIKPM_					0	0	0			REV__ENST00000428888.1_1_2:166702523-166702559:-|nuORF	REV__ENST00000428888.1_1_2:166702523-166702559:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7928344607353	2	487.790807	973.56706	2.644	0.0012897	-0.40256	-0.00019637	2.2414	0.0010933	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.89008	1	27341	27341		2.5775	0	1	1452800	+		20178	13013	9795	9834	23273	23273					0.07921964587285402
LPMLLLSKP	9	Unmodified	_LPMLLLSKP_					0	0	0			REV__ENST00000518921.1_1_8:63056787-63057258:-|nuORF	REV__ENST00000518921.1_1_8:63056787-63057258:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3182861208916	2	506.317189	1010.61982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.495	1	33.495	32.995	33.995	0								0	0	0	0.42693	1	14035	14035		2.0598	0	1		+		20179	13613	9796	9835	23274	23274					0.1149392265010647
LPNAVLTRI	9	Unmodified	_LPNAVLTRI_					0	0	0		POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8154785037041	2	498.813659	995.612765	2.0461	0.0010206	0.51462	0.0002567	2.5607	0.0012773	498.81418019374894	41.846	0.65178	43.172	42.746	43.398	1.3254					39	20	3	0	0	0	0.039278	2	17564	17515;17564		76.825	0	1	1626600			20180	8061	9797	9836	23275;23276	23276					0.114783260938907
LPNAVLTRI	9	Unmodified	_LPNAVLTRI_					0	0	0		POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	POLE3|p.I15L|1|0.1|ENSG00000148229|chr9:113410251-113410251|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8141662478447	2	498.813659	995.612765	1.7522	0.00087401	0.61351	0.00030603	2.3657	0.00118	498.813989337881	41.416	0.45327	43.309	42.991	43.444	1.8927					25	14	2	0	0	0	0.10478	2	17363	17317;17363		47.732	0	1	2215100			20181	8061	9797	9836	23277;23278	23278					0.114783260938907
LPNEELSVI	9	Unmodified	_LPNEELSVI_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1013.557604968548	1	1013.55135	1012.54408	1.561	0.0015821	1.4621	0.0014819	3.0231	0.003064	1013.5520780565819	66.151	0.33031	67.539	67.389	67.719	1.3887					16	10	2	0	0	0	0.083604	1	27752	27752		54.774	10.915	1	977470	+		20182	10564	9798	9837	23279	23279					0.03830617003529824
LPNEELSVI	9	Unmodified	_LPNEELSVI_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2818786501884	2	507.279315	1012.54408	2.353	0.0011936	3.5442	0.0017979	5.8971	0.0029915	507.28024389264414	66.173	0.48225	67.562	67.329	67.812	1.3888					44	15	5	0	0	0	0.15635	1	27753	27753		37.974	1.847	1	1688100	+		20183	10564	9798	9837	23280	23280					0.03830617003529824
LPNEELSVI	9	Unmodified	_LPNEELSVI_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2833129763603	2	507.279315	1012.54408	1.8423	0.00093455	2.5334	0.0012852	4.3757	0.0022197	507.28086981086864	65.749	0.45155	67.657	67.376	67.828	1.9085					25	14	3	0	0	0	0.073578	1	27556	27556		58.679	10.93	1	1521200	+		20184	10564	9798	9837	23281	23281					0.03830617003529824
LPNEELSVI	9	Unmodified	_LPNEELSVI_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	507.279315	1012.54408	2.353	0.0011936	3.5442	0.0017979	5.8971	0.0029915	507.28024389264414	66.173	0.48225	67.562	67.329	67.812	1.3888	-0.047859	0.00063584	NaN	58.679	44	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1688100	+		20185	10564	9798	9837							0.03830617003529824
LPNEELSVI	9	Unmodified	_LPNEELSVI_					0	0	0			REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	REV__nc|ENSG00000158865|Q8WWX8-6|SLC5A11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.279315	1012.54408	1.8423	0.00093455	2.5334	0.0012852	4.3757	0.0022197	507.28086981086864	65.749	0.45155	67.657	67.376	67.828	1.9085	0.047859	-0.00038962	NaN	58.679	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1521200	+		20186	10564	9798	9837							0.03830617003529824
LPNELIELL	9	Unmodified	_LPNELIELL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3151122927666	2	527.313158	1052.61176	4.1617	0.0021945	0.42299	0.00022305	4.5846	0.0024175	527.3133170978526	91.358	0.63164	92.34	91.974	92.605	0.98157					58	19	4	0	0	0	0.0092758	3	38467	38417;38467;38505		108	8.1981	1	9020000			20187	851;2954	9799	9838	23282;23283;23284	23283					0.08756066934324735
LPNELIELL	9	Unmodified	_LPNELIELL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1053.623461902142	1	1053.61904	1052.61176	4.3796	0.0046144	1.2445	0.0013112	5.6241	0.0059256	1053.6206095368486	91.38	0.3149	92.362	92.165	92.48	0.98157					12	9	2	0	0	0	0.024001	1	38496	38496		96.111	10.469	1	1719200			20188	851;2954	9799	9838	23285	23285					0.08756066934324735
LPNELIELL	9	Unmodified	_LPNELIELL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1053.630908191204	1	1053.61904	1052.61176	4.4978	0.004739	0.1037	0.00010926	4.6015	0.0048483	1053.619955369874	90.917	0.2496	92.283	92.093	92.342	1.366					11	7	2	0	0	0	0.044893	1	38252	38252		71.922	14.2	1	821480			20189	851;2954	9799	9838	23286	23286					0.08756066934324735
LPNELIELL	9	Unmodified	_LPNELIELL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3151733279228	2	527.313158	1052.61176	3.73	0.0019669	1.2186	0.00064258	4.9486	0.0026095	527.3136854224094	90.899	0.60603	92.265	91.929	92.535	1.366					53	18	4	0	0	0	0.0044745	1	38296	38296		123.45	20.097	1	9215900			20190	851;2954	9799	9838	23287	23287					0.08756066934324735
LPNFGSHVL	9	Unmodified	_LPNFGSHVL_					0	0	0		ENST00000497580.5_1_9:128094832-128103560:+|nuORF;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1	ENST00000497580.5_1_9:128094832-128103560:+|nuORF	ENST00000497580.5_1_9:128094832-128103560:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2710143923759	2	492.269084	982.523616	1.7068	0.00084021	-2.9733	-0.0014636	-1.2664	-0.00062343	492.26961178193716	46.066	0.72083	47.441	46.96	47.681	1.3751					60	22	4	0	0	0	0.049839	2	19266	19218;19266		68.081	28.123	1	2007200			20191	3822	9800	9839	23288;23289	23289					0.03165491134382137
LPNFGSHVL	9	Unmodified	_LPNFGSHVL_					0	0	0		ENST00000497580.5_1_9:128094832-128103560:+|nuORF;nc|ENSG00000165219|Q14C86-3|GAPVD1;nc|ENSG00000165219|Q14C86-4|GAPVD1;nc|ENSG00000165219|Q14C86-5|GAPVD1;ENSG00000165219|ENST00000297933|GAPVD1;nc|ENSG00000165219|Q14C86|GAPVD1;nc|ENSG00000165219|Q14C86-6|GAPVD1	ENST00000497580.5_1_9:128094832-128103560:+|nuORF	ENST00000497580.5_1_9:128094832-128103560:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2695800662041	2	492.269084	982.523616	1.6473	0.00081089	-1.9432	-0.00095659	-0.29596	-0.00014569	492.26931113760236	45.469	0.75771	47.429	47.083	47.841	1.9596					58	23	4	0	0	0	0.091139	3	19091	18964;19026;19091		52.268	18.081	1	1408900			20192	3822	9800	9839	23290;23291;23292	23292					0.03165491134382137
LPNGLAWG	8	Unmodified	_LPNGLAWG_					0	0	0			REV__ENST00000402029.3_1_19:39421700-39421787:+|nuORF	REV__ENST00000402029.3_1_19:39421700-39421787:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	827.4407836794853	1	827.441015	826.433738	2.8529	0.0023606	-1.8269	-0.0015116	1.026	0.00084896	827.4392080346076	109.33	0.23102	109.49	109.35	109.58	0.15898					17	10	3	0	0	0	0.86202	1	47446	47446		15.768	1.1865	1	13087000	+		20193	12887	9801	9840	23293	23293					0.013578615257983984
LPNTDVPIL	9	Unmodified	_LPNTDVPIL_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2;ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.7435180544853	2	491.2844	980.554247	2.6184	0.0012864	-0.3203	-0.00015736	2.2981	0.001129	491.28466733541313	63.416	0.43169	64.83	64.533	64.965	1.4134					22	13	2	0	0	0	0.08828	1	26606	26606		28.487	0	1	984170			20194	2634	9802	9841	23294	23294					0.06319224728770223
LPNTDVPIL	9	Unmodified	_LPNTDVPIL_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2;ENSG00000134759|ENST00000358232|ELP2;ENST00000536373.5_1_18:33718798-33725056:+|nuORF	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	491.2844	980.554247	2.5865	0.0012707	0.59067	0.00029019	3.1772	0.0015609	491.2847781239427	62.853	0.43299	64.798	64.532	64.965	1.9444	-0.015925	0.00020573	NaN	28.487	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1174000			20195	2634	9802	9841							0.06319224728770223
LPPAWRPTL	9	Unmodified	_LPPAWRPTL_					0	0	0		ENST00000427848.1_3_9:131517819-131534652:-|nuORF;ENST00000291900.6_1_9:131517819-131533932:-|nuORF	ENST00000427848.1_3_9:131517819-131534652:-|nuORF	ENST00000427848.1_3_9:131517819-131534652:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.7452880740166	2	525.808377	1049.6022	1.3412	0.00070519	-1.79	-0.00094117	-0.4488	-0.00023598	525.8065742126271	67.085	0.4026	68.974	68.646	69.048	1.8889					16	12	2	0	0	0	0.10306	1	28146	28146		19.439	10.846	1	362570			20196	5725	9803	9842	23295	23295					0.07938343439468554
LPPFLFYTNEL	11	Unmodified	_LPPFLFYTNEL_					0	0	0			REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	REV__ENST00000367279.8_1_1:202128675-202129107:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9094116091728	3	451.907823	1352.70164	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.093	1	91.498	90.998	91.998	1.4045								0	0	0	0.63775	1	37951	37951		0.094841	0	1		+		20197	12624	9804	9843	23296	23296					0.03939696542920501
LPPKLRRQKAT	11	Unmodified	_LPPKLRRQKAT_					0	0	0		ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	ENSG00000179715|ENST00000546455|PCED1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.6149169802666	3	436.613856	1306.81974	3.3302	0.001454	-0.93496	-0.00040822	2.3953	0.0010458	436.613674895507	105.84	0.13731	106.01	105.94	106.07	0.16679					18	6	4	0	0	0	1.0402	1	45127	45127		0.08335	0	1	59708000			20198	4523	9805	9844	23297	23297					0.17860113642086617
LPPLPRKVLFV	11	Unmodified	_LPPLPRKVLFV_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0554077029228	4	320.462867	1277.82236	-2.9726	-0.00095262	3.8577	0.0012362	0.88507	0.00028363	320.46378057265696	22.825	0.44669	22.825	22.722	23.169	0					21	14	2	0	0	0	0.14606	1	9656	9656		0.094841	0.094841	1	613610			20199	2051	9806	9845	23298	23298					0.19456569046997174
LPPLPRKVLFV	11	Unmodified	_LPPLPRKVLFV_					0	0	0		ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	ENSG00000118960|ENST00000304031|HS1BP3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	320.462867	1277.82236	0.035452	1.1361E-05	0.96295	0.00030859	0.9984	0.00031995	320.4632414782042	22.24	0.59057	22.463	22.259	22.85	0.223	-0.027409	-0.00017582	NaN	0.094841	37	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308100			20200	2051	9806	9845							0.19456569046997174
LPPPPAEPEPE	11	Unmodified	_LPPPPAEPEPE_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	586.7979614138603	2	586.795329	1171.5761	2.609	0.0015309	1.5063	0.00088387	4.1153	0.0024148	586.7960614292958	88.409	0.36328	88.409	88.18	88.543	0					22	11	2	0	0	0	1.0366	1	36916	36916		1.1933	0.39971	1	2423300			20201	1803	9807	9846	23299	23299					-0.0028201531333706953
LPPQRLLKYIE	11	Unmodified	_LPPQRLLKYIE_					0	0	0		nc|ENSG00000197429|Q9Y573-2|IPP;ENSG00000197429|ENST00000396478|IPP	nc|ENSG00000197429|Q9Y573-2|IPP	nc|ENSG00000197429|Q9Y573-2|IPP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	456.7828246951103	3	457.27825	1368.81292	4.3638	0.0019955	2.7981	0.0012795	7.1619	0.003275	457.2803741232487	92.027	0.43934	92.964	92.706	93.146	0.93623					18	13	2	0	0	0	0.14606	1	38769	38769		1.4551	0.12547	1	1091900			20202	5006	9808	9847	23300	23300					0.14326755970841987
LPPSLLPLFL	10	Unmodified	_LPPSLLPLFL_					0	0	0			REV__ENST00000535229.1_1_6:166195147-166399619:-|nuORF	REV__ENST00000535229.1_1_6:166195147-166399619:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3538085818291	2	555.352086	1108.68962	2.8087	0.0015598	-0.20893	-0.00011603	2.5998	0.0014438	555.3518410762648	84.998	0.46016	86.594	86.311	86.771	1.5962					54	17	4	0	0	0	0.84024	1	35570	35570		7.9102	7.9102	1	62070000	+		20203	13741	9809	9848	23301	23301					0.13962124590375424
LPPVSPKT	8	Unmodified	_LPPVSPKT_					0	0	0			REV__CUX1|p.Q1075Sfs*45|1|0.07|ENSG00000257923|chr7:102227458-102227458|C/-|frameshift_variant	REV__CUX1|p.Q1075Sfs*45|1|0.07|ENSG00000257923|chr7:102227458-102227458|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.5807067751884	2	419.755278	837.496004	0.91813	0.00038539	2.0871	0.00087606	3.0052	0.0012614	419.75736144044953	52.455	0.24903	53.851	53.743	53.992	1.3966					10	7	2	0	0	0	2.3239	1	22010	22010		2.3027	0	1	872900	+		20204	8415	9810	9849	23302	23302					0.0707558787414655
LPQAWHRAS	9	Unmodified	_LPQAWHRAS_					0	0	0		ENST00000404933.6_1_X:21958905-21985317:+|nuORF	ENST00000404933.6_1_X:21958905-21985317:+|nuORF	ENST00000404933.6_1_X:21958905-21985317:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0703307986259	3	355.857797	1064.55156	0.85284	0.00030349	-2.7071	-0.00096333	-1.8542	-0.00065984	355.8580054302601	69.328	1.441	70.694	69.875	71.316	1.3657					97	46	5	0	0	0	0.11812	1	29182	29182		0.23584	0	1	3794700			20205	6358	9811	9850	23303	23303					0.021868141144750552
LPQCELPAW	9	Unmodified	_LPQCELPAW_					0	0	0			REV__ENST00000530791.5_1_11:65687742-65688356:+|nuORF	REV__ENST00000530791.5_1_11:65687742-65688356:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.3141357302666	2	528.762778	1055.511	3.1738	0.0016782	2.6991	0.0014272	5.8728	0.0031053	528.7648728863368	81.179	0.30899	82.412	82.255	82.564	1.2332					15	9	2	0	0	0	0.11333	1	34025	34025		13.508	0	1	869430	+		20206	13704	9812	9851	23304	23304					-0.014532883201809454
LPQDVILKF	9	Unmodified	_LPQDVILKF_					0	0	0		DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27;ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8248168826103	2	536.823692	1071.63283	3.031	0.0016271	1.3057	0.00070092	4.3367	0.002328	536.8234621260565	61.884	0.62984	63.302	62.927	63.556	1.4177					38	19	4	0	0	0	0.019071	1	25918	25918		100.09	30.986	1	16542000			20207	398	9813	9852	23305	23305					0.09988077033858644
LPQDVILKF	9	Unmodified	_LPQDVILKF_					0	0	0		DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27;ENST00000471144.1_1_20:47852884-47860241:+|nuORF;ENST00000484427.5_1_20:47852594-47860368:+|nuORF	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8252441287041	2	536.823692	1071.63283	2.341	0.0012567	0.97221	0.00052191	3.3132	0.0017786	536.8240022701988	61.298	0.59763	63.255	62.964	63.562	1.9571					39	18	4	0	0	0	0.034867	1	25708	25708		80.676	16.716	1	17489000			20208	398	9813	9852	23306	23306					0.09988077033858644
LPQEYFRF	8	Unmodified	_LPQEYFRF_					0	0	0		PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant;ENSG00000280165|ENST00000409204|PCDH20	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	PCDH20|p.D346Vfs*64|1|0.1|ENSG00000280165|chr13:61413062-61413062|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2202636599541	2	550.282192	1098.54983	2.4194	0.0013313	-2.1829	-0.0012012	0.23649	0.00013014	550.2809877580565	80.066	0.31208	81.317	81.171	81.483	1.2512					11	9	2	0	0	0	2.3239	1	33641	33641		2.8892	0.58649	1	419050			20209	5482	9814	9853	23307	23307					0.004497603058553068
LPQFDDER	8	Unmodified	_LPQFDDER_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.1192199587822	2	510.243264	1018.47197	1.0441	0.00053275	0.44736	0.00022826	1.4915	0.00076101	510.24296793493403	28.593	0.42575	30.368	30.122	30.548	1.7754					22	13	3	0	0	0	2.3239	1	11947	11947		5.7604	0	1	893160	+		20210	9049	9815	9854	23308	23308					-0.036522973501973865
LPQFDSAGGGK	11	Unmodified	_LPQFDSAGGGK_					0	0	0			REV__ENST00000560723.5_1_15:81605599-81615081:-|nuORF	REV__ENST00000560723.5_1_15:81605599-81615081:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1076.542895495892	1	1076.5371	1075.52982	2.6538	0.0028569	2.7916	0.0030053	5.4454	0.0058622	1076.5398079177364	76.229	0.75622	77.523	77.006	77.762	1.2938					53	24	4	0	0	0	0.12312	1	32026	32026		51.63	3.284	1	3375500	+		20211	13897	9816	9855	23309	23309					-0.004920354247587966
LPQNQPFVF	9	Unmodified	_LPQNQPFVF_					0	0	0		ENST00000541388.1_1_11:64008551-64010784:+|nuORF;ENSG00000173486|ENST00000309366|FKBP2;ENST00000536642.5_1_11:64008530-64011025:+|nuORF	ENST00000541388.1_1_11:64008551-64010784:+|nuORF	ENST00000541388.1_1_11:64008551-64010784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2930786013603	2	545.290017	1088.56548	3.0189	0.0016462	0.78556	0.00042836	3.8045	0.0020745	545.7910595174847	64.459	0.58372	65.866	65.71	66.293	1.4071					32	18	2	0	0	0	0.5697	1	27062	27062		12.532	0	1	1736200			20212	4285	9817	9856	23310	23310					0.024740468228856116
LPQPQQGLVF	10	Unmodified	_LPQPQQGLVF_					0	0	0			REV__ENSG00000223611|ENST00000486479|SUPT20HL2	REV__ENSG00000223611|ENST00000486479|SUPT20HL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	376.7571899294853	3	376.213358	1125.61824	1.15	0.00043264	3.225	0.0012133	4.3749	0.0016459	376.54907255490883	43.716	0.27383	45.07	44.918	45.191	1.3536					15	8	3	0	0	0	0.12513	1	18289	18289		4.1895	0	1	426100	+		20213	11885	9818	9857	23311	23311					0.060460048857066795
LPQQLRLLL	9	Unmodified	_LPQQLRLLL_					0	0	0		ENST00000234610.5_1_1:1631484-1633139:+|nuORF;ENST00000486400.1_1_1:1569398-1569479:+|nuORF	ENST00000234610.5_1_1:1631484-1633139:+|nuORF	ENST00000234610.5_1_1:1631484-1633139:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.8129760622978	2	547.358234	1092.70191	1.3955	0.00076386	0.10676	5.8437E-05	1.5023	0.00082229	547.3580407517281	66.796	0.32997	68.685	68.467	68.797	1.8889					16	10	2	0	0	0	0.029304	1	28008	28008		57.471	17.514	1	653520			20214	5557	9819	9858	23312	23312					0.15927161053423333
LPQQPNQKF	9	Unmodified	_LPQQPNQKF_					0	0	0		nc|ENSG00000102383|Q96MV8-2|ZDHHC15;ZDHHC15|p.K210Nfs*19|1|0.16|ENSG00000102383|chrX:75424758-75424758|C/-|frameshift_variant;ZDHHC15|p.S303Cfs*2|1|0.29|ENSG00000102383|chrX:75417134-75417146|AGTGGGTTCTGTG/-|frameshift_variant;nc|ENSG00000102383|Q96MV8-3|ZDHHC15;ENSG00000102383|ENST00000373367|ZDHHC15	nc|ENSG00000102383|Q96MV8-2|ZDHHC15	nc|ENSG00000102383|Q96MV8-2|ZDHHC15	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.2022582888603	3	367.201341	1098.58219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.23	1	103.29	102.79	103.79	0.059502								0	0	0	0.42693	1	43271	43271		2.4985	0.84587	1				20215	1388	9820	9859	23313	23313					0.03684547708826358
LPQSERFPV	9	Unmodified	_LPQSERFPV_					0	0	0			REV__ENSG00000105738|ENST00000222345|SIPA1L3	REV__ENSG00000105738|ENST00000222345|SIPA1L3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1605712771416	2	536.792924	1071.57129	1.8263	0.00098032	2.3812	0.0012782	4.2074	0.0022585	536.7935131071779	52.971	0.26915	53.293	53.14	53.409	0.32283					12	8	2	0	0	0	0.11645	1	22153	22153		2.0598	0	1	637590	+		20216	9189	9821	9860	23314	23314					0.03837145334568959
LPQWQLLL	8	Unmodified	_LPQWQLLL_					0	0	0		nc|ENSG00000103546|P23975-3|SLC6A2;SLC6A2|p.F523Lfs*59|1|0.05|ENSG00000103546|chr16:55699632-55699633|-/GCAAGGGAGACTGAGA|frameshift_variant;ENSG00000103546|ENST00000568943|SLC6A2;nc|ENSG00000103546|P23975-2|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	nc|ENSG00000103546|P23975-3|SLC6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.8054992556572	2	505.805303	1009.59605	2.1386	0.0010817	-2.7368	-0.0013843	-0.59815	-0.00030255	505.8037812289999	43.839	0.50526	45.783	45.516	46.021	1.9438					28	15	2	0	0	0	0.38673	2	18340	18340;18387		56.541	18.39	1	1844600			20217	1435	9822	9861	23315;23316	23315					0.09163825207951959
LPRDQQVL	8	Unmodified	_LPRDQQVL_					0	0	0			REV__ENST00000509876.5_1_6:64356628-64388746:+|nuORF	REV__ENST00000509876.5_1_6:64356628-64388746:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7823058962822	2	484.779816	967.545079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.935	1	60.354	59.854	60.854	1.4196								0	0	0	1.0178	1	24707	24707		26.341	3.1929	1		+		20218	13563	9823	9862	23317	23317					0.06000876163091107
LPREMHYDRRR	11	Unmodified	_LPREMHYDRRR_					0	0	0			REV__ENST00000489483.5_1_3:48670389-48671049:-|nuORF	REV__ENST00000489483.5_1_3:48670389-48671049:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	764.9007446169853	2	764.899325	1527.7841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.098	1	98.098	97.598	98.598	0								0	0	0	0.63775	1	41016	41016		1.4819	0	1		+		20219	11891	9824	9863	23318	23318					0.041317081227361996
LPRICRSRPRG	11	Unmodified	_LPRICRSRPRG_					0	0	0			REV__ENST00000452622.1_1_7:562147-562501:+|nuORF	REV__ENST00000452622.1_1_7:562147-562501:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.1998779177666	4	328.445112	1309.75134	0.69854	0.00022943	-1.784	-0.00058594	-1.0854	-0.00035651	328.44445303453875	33.582	0.80533	33.879	33.279	34.085	0.29701					55	26	3	0	0	0	0.14606	1	14046	14046		2.4348	1.9803	1	1841800	+		20220	13145	9825	9864	23319	23319					0.10885545790551987
LPRICRSRPRG	11	Unmodified	_LPRICRSRPRG_					0	0	0			REV__ENST00000452622.1_1_7:562147-562501:+|nuORF	REV__ENST00000452622.1_1_7:562147-562501:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1987182497978	4	328.445112	1309.75134	-0.65559	-0.00021532	-2.1151	-0.0006947	-2.7707	-0.00091002	328.4444714460363	32.445	0.55714	33.724	33.33	33.887	1.2782					31	18	2	0	0	0	0.14606	1	13560	13560		2.084	0.62885	1	1608200	+		20221	13145	9825	9864	23320	23320					0.10885545790551987
LPRLLLFLH	9	Unmodified	_LPRLLLFLH_					0	0	0			REV__ENST00000251127.10_1_13:101795458-101795524:-|nuORF	REV__ENST00000251127.10_1_13:101795458-101795524:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5786926150322	3	374.577972	1120.71209	-0.21915	-8.209E-05	1.0326	0.00038678	0.81343	0.00030469	374.5783428423551	31.629	0.45456	32.911	32.655	33.11	1.2813					40	14	3	0	0	0	0.84531	1	13186	13186		1.1933	0	1	5721400	+		20222	12144	9826	9865	23321	23321					0.15655768778628953
LPRLTQRRQ	9	Unmodified	_LPRLTQRRQ_					0	0	0		ENST00000398808.3_1_11:61038963-61040779:-|nuORF	ENST00000398808.3_1_11:61038963-61040779:-|nuORF	ENST00000398808.3_1_11:61038963-61040779:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3589965701103	2	584.357088	1166.69962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.439	1	76.76	76.26	77.26	0.32163								0	0	0	0.42693	1	31971	31971		2.0598	0.40713	1				20223	6329	9827	9866	23322	23322					0.122941253683166
LPRMTERMS	9	Unmodified	_LPRMTERMS_					0	0	0			REV__ENST00000310771.8_1_7:99950889-99951396:+|nuORF	REV__ENST00000310771.8_1_7:99950889-99951396:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	560.8256103396416	2	560.783718	1119.55288	2.8428	0.0015942	1.4824	0.00083128	4.3252	0.0024255	560.784531494691	63.976	0.34087	65.904	65.704	66.045	1.928					16	10	2	0	0	0	0.10844	1	26819	26819		16.942	6.1184	1	589950	+		20224	12363	9828	9867	23323	23323					-0.00211055903309898
LPRQKKRYE	9	Unmodified	_LPRQKKRYE_					0	0	0			REV__ENSG00000137076|ENST00000314888|TLN1	REV__ENSG00000137076|ENST00000314888|TLN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3622314333916	2	609.359296	1216.70404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.31	1	116.46	115.96	116.96	0.15228								0	0	0	0.42693	1	50266	50266		0.6015	0	1		+		20225	10010	9829	9868	23324	23324					0.1043558979122281
LPRRFLAPWIA	11	Unmodified	_LPRRFLAPWIA_					0	0	0		ENST00000327300.11_1_1:32479474-32479630:+|nuORF	ENST00000327300.11_1_1:32479474-32479630:+|nuORF	ENST00000327300.11_1_1:32479474-32479630:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	670.4063598513603	2	670.403507	1338.79246	1.7754	0.0011903	1.8595	0.0012466	3.6349	0.0024369	670.4046235144475	96.71	0.19794	96.71	96.602	96.8	0					19	6	4	0	0	0	1.0388	1	40424	40424		1.4819	1.2129	1	8174900			20226	5875	9830	9869	23325	23325					0.1366163010168293
LPRRKRPPSRK	11	Unmodified	_LPRRKRPPSRK_					0	0	0		ENST00000534894.5_2_10:114710255-114710447:+|nuORF	ENST00000534894.5_2_10:114710255-114710447:+|nuORF	ENST00000534894.5_2_10:114710255-114710447:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.4763671755791	4	348.477106	1389.87932	-0.37743	-0.00013153	-2.0329	-0.00070842	-2.4103	-0.00083994	348.476420364946	29.682	1.2515	30.964	30.312	31.564	1.2825					101	40	4	0	0	0	1.0402	1	12328	12328		0.094841	0.011491	1	5197400			20227	7192	9831	9870	23326	23326					0.19997429376098808
LPRSLLLEPP	10	Unmodified	_LPRSLLLEPP_					0	0	0		nc|ENSG00000099910|Q53GT1-3|KLHL22;ENSG00000099910|ENST00000328879|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	nc|ENSG00000099910|Q53GT1-3|KLHL22	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8486816287041	2	567.847699	1133.68084	2.2571	0.0012817	-4.2025	-0.0023864	-1.9454	-0.0011047	567.8459281354867	85.654	0.71606	85.654	85.323	86.039	0					35	22	2	0	0	0	0.89803	1	35760	35760		1.3295	0.80477	1	673890			20228	1221	9832	9871	23327	23327					0.1193515095390012
LPRVPRAQAA	10	Unmodified	_LPRVPRAQAA_					0	0	0		ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2222778201103	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.908	1	19.101	18.601	19.601	0.19342								0	0	0	0.66218	1	7851	7851		0.77653	0.37582	1				20229	7114	9833	9872	23328	23328					0.1049964907397225
LPRVPRAQAA	10	Unmodified	_LPRVPRAQAA_					0	0	0		ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2222473025322	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.028	1	19.221	18.721	19.721	0.19342								0	0	0	0.66218	1	7901	7901		0.77653	0.37582	1				20230	7114	9833	9872	23329	23329					0.1049964907397225
LPRVPRAQAA	10	Unmodified	_LPRVPRAQAA_					0	0	0		ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2228576540947	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.118	1	19.312	18.812	19.812	0.19342								0	0	0	0.66218	1	7939	7939		0.77653	0.078866	1				20231	7114	9833	9872	23330	23330					0.1049964907397225
LPRVPRAQAA	10	Unmodified	_LPRVPRAQAA_					0	0	0		ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2220336794853	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.325	1	19.519	19.019	20.019	0.19342								0	0	0	0.66218	1	8026	8026		0.77653	0.37582	1				20232	7114	9833	9872	23331	23331					0.1049964907397225
LPRVPRAQAA	10	Unmodified	_LPRVPRAQAA_					0	0	0		ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2230102419853	3	360.220847	1077.64071	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.138	1	20.348	19.848	20.848	0.21024								0	0	0	0.66218	1	8367	8367		0.77653	0.27058	1				20233	7114	9833	9872	23332	23332					0.1049964907397225
LPRWFSSVL	9	Unmodified	_LPRWFSSVL_					0	0	0		ENST00000373899.3_1_10:60145307-60146438:+|nuORF;nc|ENSG00000108064|Q00059-2|TFAM;ENSG00000108064|ENST00000487519|TFAM	ENST00000373899.3_1_10:60145307-60146438:+|nuORF	ENST00000373899.3_1_10:60145307-60146438:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.7914306521416	2	552.813659	1103.61277	1.5025	0.00083062	-2.2775	-0.001259	-0.77494	-0.0004284	552.8127304557279	46.298	0.59019	47.673	47.493	48.083	1.3751					31	18	3	0	0	0	0.1082	1	19346	19346		18.146	7.3224	1	1120900			20234	1621	9834	9873	23333	23333					0.06510326093916774
LPSAFYIKL	9	Unmodified	_LPSAFYIKL_					0	0	0		ENSG00000134294|ENST00000256689|SLC38A2;nc|ENSG00000134294|Q96QD8-2|SLC38A2;ENST00000548785.1_1_12:46756051-46756147:-|nuORF	ENSG00000134294|ENST00000256689|SLC38A2	ENSG00000134294|ENST00000256689|SLC38A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3150512576103	2	526.312961	1050.61137	1.8868	0.00099304	2.3272	0.0012248	4.214	0.0022179	526.314176920551	66.636	0.74454	68.025	67.782	68.526	1.3887					42	23	3	0	0	0	0.037098	2	27944	27944;27997		78.728	44.626	1	1900500			20235	2606	9835	9874	23334;23335	23334					0.08808692005140983
LPSAFYIKL	9	Unmodified	_LPSAFYIKL_					0	0	0		ENSG00000134294|ENST00000256689|SLC38A2;nc|ENSG00000134294|Q96QD8-2|SLC38A2;ENST00000548785.1_1_12:46756051-46756147:-|nuORF	ENSG00000134294|ENST00000256689|SLC38A2	ENSG00000134294|ENST00000256689|SLC38A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3146240115166	2	526.312961	1050.61137	1.7935	0.00094395	1.3798	0.00072621	3.1733	0.0016702	526.3136891912745	66.163	0.53437	68.052	67.839	68.373	1.8889					33	16	3	0	0	0	0.093059	1	27772	27772		51.63	17.228	1	1327100			20236	2606	9835	9874	23336	23336					0.08808692005140983
LPSASDDDN	9	Unmodified	_LPSASDDDN_					0	0	0			REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.1934081912041	2	467.193436	932.37232	2.2477	0.0010501	-1.431	-0.00066853	0.8167	0.00038156	467.1924975147135	43.032	0.36026	44.953	44.751	45.111	1.9211					20	11	2	0	0	0	0.83213	1	18044	18044		2.0598	1.2661	1	1353200	+		20237	10334	9836	9875	23337	23337					-0.09657159754806344
LPSASDDDN	9	Unmodified	_LPSASDDDN_					0	0	0			REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	467.193436	932.37232	2.0007	0.00093473	-0.88033	-0.00041129	1.1204	0.00052345	467.1927656699115	43.336	0.47947	44.689	44.499	44.978	1.3536	-0.13169	0.00025797	NaN	2.0598	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1872300	+		20238	10334	9836	9875							-0.09657159754806344
LPSASDDDN	9	Unmodified	_LPSASDDDN_					0	0	0			REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	REV__ENST00000425118.5_1_2:74754198-74754237:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	467.193436	932.37232	2.2477	0.0010501	-1.431	-0.00066853	0.8167	0.00038156	467.1924975147135	43.032	0.36026	44.953	44.751	45.111	1.9211	0.13169	-0.00025652	NaN	2.0598	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1353200	+		20239	10334	9836	9875							-0.09657159754806344
LPSCPVRLL	9	Unmodified	_LPSCPVRLL_					0	0	0			REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	499.7046081423759	2	499.296788	996.579022	1.9542	0.00097572	-1.7074	-0.00085252	0.24676	0.00012321	499.2958980354467	49.431	0.36801	50.822	50.612	50.98	1.3911					14	11	2	0	0	0	0.089748	1	20661	20661		22.736	3.4793	1	465140	+		20240	11620	9837	9876	23338	23338					0.08059581330496712
LPSCPVRLL	9	Unmodified	_LPSCPVRLL_					0	0	0			REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	499.296788	996.579022	1.7097	0.00085367	-1.3271	-0.00066262	0.38264	0.00019105	499.2960334210345	48.779	0.27955	50.756	50.637	50.917	1.9772	-0.032962	0.00014209	NaN	22.736	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431890	+		20241	11620	9837	9876							0.08059581330496712
LPSDTRLVL	9	Unmodified	_LPSDTRLVL_					0	0	0		nc|ENSG00000149131|P05155-2|SERPING1;ENSG00000149131|ENST00000278407|SERPING1;nc|ENSG00000149131|P05155-3|SERPING1	nc|ENSG00000149131|P05155-2|SERPING1	nc|ENSG00000149131|P05155-2|SERPING1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.6179992556572	2	507.303124	1012.5917	2.1263	0.0010787	0.0084864	4.3052E-06	2.1348	0.001083	507.3034664481818	43.406	0.29644	44.76	44.59	44.886	1.3536					14	9	2	0	0	0	0.095873	1	18168	18168		20.415	2.2682	1	977810			20242	3229	9838	9877	23339	23339					0.08590315994376851
LPSELIVHI	9	Unmodified	_LPSELIVHI_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8118774294853	2	510.808042	1019.60153	2.8069	0.0014338	2.1066	0.001076	4.9134	0.0025098	510.80907496836414	60.017	0.39004	61.437	61.176	61.566	1.4196					22	12	2	0	0	0	0.00025648	2	25109	25109;25160		139.54	61.56	1	3059500			20243	3832	9839	9878	23340;23341	23340					0.09251503999746546
LPSELIVHI	9	Unmodified	_LPSELIVHI_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8125793337822	2	510.808042	1019.60153	3.0688	0.0015676	1.7753	0.00090685	4.8441	0.0024744	510.80860078042065	59.501	0.3569	61.47	61.225	61.582	1.969					19	11	2	0	0	0	0.006164	2	24914	24914;24962		117.6	50.255	1	3222200			20244	3832	9839	9878	23342;23343	23342					0.09251503999746546
LPSFDAHLTEL	11	Unmodified	_LPSFDAHLTEL_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8235351443291	2	621.821878	1241.6292	2.7656	0.0017197	-0.1067	-6.635E-05	2.6589	0.0016534	621.8217096113084	61.265	0.36264	62.683	62.503	62.865	1.4177					34	11	4	0	0	0	4.2698E-16	2	25716	25668;25716		216.57	130.92	1	12075000			20245	4049	9840	9879	23344;23345	23345					0.018053624693038728
LPSFDAHLTEL	11	Unmodified	_LPSFDAHLTEL_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8231078982353	2	621.821878	1241.6292	2.6701	0.0016603	-0.21788	-0.00013548	2.4522	0.0015248	621.8217152250979	60.74	0.33567	62.705	62.514	62.85	1.9653					32	10	4	0	0	0	8.0444E-08	2	25494	25447;25494		201.57	146.07	1	9761700			20246	4049	9840	9879	23346;23347	23347					0.018053624693038728
LPSFQATTL	9	Unmodified	_LPSFQATTL_					0	0	0			REV__ENST00000381774.8_1_16:12757547-12757691:-|nuORF	REV__ENST00000381774.8_1_16:12757547-12757691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2677795290947	2	489.26875	976.522947	0.94032	0.00046007	-0.82117	-0.00040177	0.11915	5.8297E-05	489.26857859835326	55.821	0.40792	57.79	57.618	58.026	1.9684					28	13	3	0	0	0	0.25667	1	23484	23484		27.629	0	1	4858600	+		20247	12779	9841	9880	23348	23348					0.033746516946507654
LPSGAILSL	9	Unmodified	_LPSGAILSL_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	870.5326415896416	1	870.529495	869.522219	1.8119	0.0015773	0.24958	0.00021727	2.0615	0.0017946	870.5296309814664	67.672	0.48394	69.05	68.85	69.334	1.3778					28	15	2	0	0	0	0.018723	2	28375	28375;28429		100.37	7.5494	1	2481800			20248	2335	9842	9881	23349;23350	23349					0.08223857045629757
LPSGAILSL	9	Unmodified	_LPSGAILSL_					0	0	0		nc|ENSG00000127463|Q8N766-4|EMC1;nc|ENSG00000127463|Q8N766-3|EMC1;nc|ENSG00000127463|Q8N766-2|EMC1;ENSG00000127463|ENST00000477853|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	nc|ENSG00000127463|Q8N766-4|EMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	870.5291015505791	1	870.529495	869.522219	1.0964	0.00095449	0.23368	0.00020342	1.3301	0.0011579	870.5294454729878	67.145	0.39847	69.034	68.828	69.227	1.8889					20	12	2	0	0	0	0.018723	1	28166	28166		100.37	7.5494	1	2402700			20249	2335	9842	9881	23351	23351					0.08223857045629757
LPSGAVFVI	9	Unmodified	_LPSGAVFVI_					0	0	0		nc|ENSG00000156958|Q01415-2|GALK2;ENSG00000156958|ENST00000560031|GALK2;ENST00000561014.1_1_15:49531438-49610381:+|nuORF;ENST00000560119.5_1_15:49527865-49611209:+|nuORF	nc|ENSG00000156958|Q01415-2|GALK2	nc|ENSG00000156958|Q01415-2|GALK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5400878787041	1	902.534581	901.527304	3.2101	0.0028972	-0.28793	-0.00025987	2.9221	0.0026373	902.534903321082	73.414	0.40893	74.732	74.526	74.935	1.318					19	12	2	0	0	0	0.059546	1	30791	30791		64.236	18.215	1	1366600			20250	3458	9843	9882	23352	23352					0.07260160908231228
LPSGAVFVI	9	Unmodified	_LPSGAVFVI_					0	0	0		nc|ENSG00000156958|Q01415-2|GALK2;ENSG00000156958|ENST00000560031|GALK2;ENST00000561014.1_1_15:49531438-49610381:+|nuORF;ENST00000560119.5_1_15:49527865-49611209:+|nuORF	nc|ENSG00000156958|Q01415-2|GALK2	nc|ENSG00000156958|Q01415-2|GALK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5344726443291	1	902.534581	901.527304	2.4744	0.0022333	-0.82195	-0.00074184	1.6525	0.0014914	902.5341804141228	72.867	0.25422	74.677	74.48	74.734	1.8101					12	7	2	0	0	0	0.051699	1	30543	30543		67.344	12.57	1	1141600			20251	3458	9843	9882	23353	23353					0.07260160908231228
LPSHQQCK	8	Unmodified	_LPSHQQCK_					0	0	0		chr6:109250991-109254448|247|18.56|0.13|7.16|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|5	chr6:109250991-109254448|247|18.56|0.13|7.16|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|5	chr6:109250991-109254448|247|18.56|0.13|7.16|+|2|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	470.7902099490166	2	470.737094	939.459635	2.8736	0.0013527	-0.31112	-0.00014645	2.5625	0.0012063	470.7368015441328	79.741	0.37074	80.992	80.739	81.109	1.2512					17	11	2	0	0	0	2.3239	1	33405	33405		13.508	0	1	984990			20252	270	9844	9883	23354	23354					-0.012516122942315633
LPSLLKVLL	9	Unmodified	_LPSLLKVLL_					0	0	0		ENST00000538524.1_1_12:6755846-6756568:-|nuORF;ENSG00000111644|ENST00000229243|ACRBP	ENST00000538524.1_1_12:6755846-6756568:-|nuORF	ENST00000538524.1_1_12:6755846-6756568:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.3487121462822	2	498.346803	994.679054	2.6713	0.0013313	-0.1475	-7.3506E-05	2.5238	0.0012577	498.34676532547576	78.625	0.43594	79.892	79.694	80.13	1.2668					28	13	3	0	0	0	0.073578	1	33001	33001		58.679	3.9053	1	1687000			20253	1747	9845	9884	23355	23355					0.18150141935961983
LPSLRRRDSPV	11	Unmodified	_LPSLRRRDSPV_					0	0	0		ENST00000599423.5_1_19:14879714-14887649:-|nuORF	ENST00000599423.5_1_19:14879714-14887649:-|nuORF	ENST00000599423.5_1_19:14879714-14887649:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	432.8858215212822	3	432.589599	1294.74697	0.47148	0.00020396	0.91526	0.00039593	1.3867	0.00059989	432.5899025296923	16.51	0.27809	17.408	17.238	17.516	0.89794					36	13	3	0	0	0	0.14606	1	6834	6834		0.50596	0.23694	1	1776500			20254	7533	9846	9885	23356	23356					0.11138359848632717
LPSPTLPSPL	10	Unmodified	_LPSPTLPSPL_					0	0	0		ENST00000489822.5_1_10:121336540-121356247:-|nuORF	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3017150759697	2	511.30005	1020.58555	2.5398	0.0012986	0.97583	0.00049894	3.5156	0.0017975	511.3005604718767	68.467	0.36588	69.845	69.706	70.072	1.3778					29	11	4	0	0	0	0.5476	1	28734	28734		25.399	1.3787	1	8497200			20255	6900	9847	9886	23357	23357					0.07607797762852897
LPSSFVEKL	9	Unmodified	_LPSSFVEKL_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;ENST00000522480.5_1_16:21475086-21478634:-|nuORF;ENST00000566127.1_1_16:29556504-29560080:-|nuORF;ENST00000529428.5_1_16:30296511-30300103:-|nuORF;ENST00000532337.1_1_16:29451232-29458344:-|nuORF;ENST00000523028.5_1_16:21892164-21910369:-|nuORF;ENST00000309865.11_1_16:22482951-22501641:+|nuORF;SMG1|p.R903Qfs*25|1|0.15|ENSG00000157106|chr16:18869228-18869229|GC/-|frameshift_variant;SMG1|p.K1189Nfs*16|1|0.21|ENSG00000157106|chr16:18863756-18863778|TTGAGATGTAGCACTCACATGCT/-|frameshift_variant	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7970458865166	2	510.292225	1018.5699	2.2697	0.0011582	3.1723	0.0016188	5.4419	0.002777	510.79541135775156	45.729	0.43921	47.104	46.832	47.271	1.3751					43	13	4	0	0	0	0.099383	2	19138	19083;19138		49.527	2.2295	1	6067400			20256	3464	9848	9887	23358;23359	23359					0.061355112458159056
LPSSRIEVL	9	Unmodified	_LPSSRIEVL_					0	0	0		ENSG00000148429|ENST00000609104|USP6NL;nc|ENSG00000148429|Q92738-2|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	ENSG00000148429|ENST00000609104|USP6NL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.6183654665947	2	507.303124	1012.5917	1.923	0.00097557	1.5427	0.00078264	3.4658	0.0017582	507.30423087967085	42.789	0.27129	44.71	44.539	44.811	1.9211					15	8	2	0	0	0	0.10339	1	17886	17886		10.074	0	1	1146000			20257	3211	9849	9888	23360	23360					0.08590315994376851
LPSSVLHII	9	Unmodified	_LPSSVLHII_					0	0	0		ENSG00000000460|ENST00000359326|C1orf112	ENSG00000000460|ENST00000359326|C1orf112	ENSG00000000460|ENST00000359326|C1orf112	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.8048278689384	2	489.80276	977.590967	1.4369	0.00070378	1.3869	0.0006793	2.8238	0.0013831	489.80342228130905	58.294	0.28858	60.264	60.084	60.373	1.969					12	8	2	0	0	0	0.076627	1	24436	24436		57.471	21.427	1	997340			20258	452	9850	9889	23361	23361					0.1012752134532775
LPSSVLHII	9	Unmodified	_LPSSVLHII_					0	0	0		ENSG00000000460|ENST00000359326|C1orf112	ENSG00000000460|ENST00000359326|C1orf112	ENSG00000000460|ENST00000359326|C1orf112	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.80276	977.590967	1.7702	0.00086706	-1.3722	-0.00067212	0.39798	0.00019493	489.8018843374575	58.785	0.28102	60.203	60.099	60.38	1.4181	-0.030173	-0.0015335	NaN	57.471	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	764250			20259	452	9850	9889							0.1012752134532775
LPSSVLLSL	9	Unmodified	_LPSSVLLSL_					0	0	0			REV__ENST00000493504.1_1_19:59094431-59094902:+|nuORF	REV__ENST00000493504.1_1_19:59094431-59094902:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.5768920779228	1	928.57136	927.564084	2.9091	0.0027013	-0.67055	-0.00062266	2.2385	0.0020786	928.5694412275179	75.253	0.30205	76.559	76.404	76.706	1.3063					14	9	2	0	0	0	0.022807	1	31586	31586		97.075	0	1	1103500	+		20260	13449	9851	9890	23362	23362					0.09740412734140591
LPSVIRASR	9	Unmodified	_LPSVIRASR_					0	0	0		ENST00000597790.5_1_19:50879837-50880852:+|nuORF	ENST00000597790.5_1_19:50879837-50880852:+|nuORF	ENST00000597790.5_1_19:50879837-50880852:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.7752563357353	2	499.808908	997.603263	1.2558	0.00062767	-2.0158	-0.0010075	-0.76001	-0.00037986	499.80601323609994	67.319	1.5766	69.189	68.967	70.544	1.87					62	50	2	0	0	0	0.11463	1	28808	28808		12.532	5.2423	1	2803400			20261	7529	9852	9891	23363	23363					0.10436557808361613
LPSVSARLYFL	11	Unmodified	_LPSVSARLYFL_					0	0	0		HCAR1|p.A327Sfs*11|1|0.06|ENSG00000196917|chr12:122729361-122729362|-/ACAGGGGAGGCCGGGCACGGTGGCT|frameshift_variant;ENSG00000196917|ENST00000432564|HCAR1	HCAR1|p.A327Sfs*11|1|0.06|ENSG00000196917|chr12:122729361-122729362|-/ACAGGGGAGGCCGGGCACGGTGGCT|frameshift_variant	HCAR1|p.A327Sfs*11|1|0.06|ENSG00000196917|chr12:122729361-122729362|-/ACAGGGGAGGCCGGGCACGGTGGCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3649169802666	2	633.366256	1264.71796	2.7361	0.0017329	-3.389	-0.0021465	-0.65291	-0.00041353	633.3636437289665	81.242	0.12321	82.938	82.86	82.983	1.6959					5	3	2	0	0	0	0.91768	1	34092	34092		8.7454	0.58988	1	1660400			20262	4967	9853	9892	23364	23364					0.0961882249964674
LPSVSKQMPTL	11	Unmodified	_LPSVSKQMPTL_					0	0	0			REV__ENSG00000109171|ENST00000264313|SLAIN2	REV__ENSG00000109171|ENST00000264313|SLAIN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8352538943291	2	600.836474	1199.65839	1.4033	0.00084316	-2.4738	-0.0014863	-1.0705	-0.00064319	600.835280016087	79.808	0.49461	81.525	81.353	81.848	1.7167					25	15	3	0	0	0	0.66633	1	33444	33444		19.257	1.1106	1	1018600	+		20263	9270	9854	9893	23365	23365					0.0665518349399008
LPSYQYVQF	9	Unmodified	_LPSYQYVQF_					0	0	0			REV__ENSG00000112343|ENST00000357085|TRIM38	REV__ENSG00000112343|ENST00000357085|TRIM38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	573.3317748904228	2	572.787307	1143.56006	5.2245	0.0029926	-2.5697	-0.0014719	2.6548	0.0015207	573.2869909188424	89.499	0.12703	90.519	90.429	90.556	1.0199					5	3	2	0	0	0	0.11463	1	37730	37730		12.532	0.89125	1	263420	+		20264	9362	9855	9894	23366	23366					-0.005976767595711863
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.2648193240166	2	590.263862	1178.51317	3.0161	0.0017803	-1.1331	-0.0006688	1.883	0.0011115	590.2632075118654	64.283	0.55156	65.69	65.433	65.985	1.4071					53	17	4	0	0	0	0.013238	3	26949	26907;26949;26991		104.8	64.842	1	10148000			20265	2393	9856	9895	23367;23368;23369	23368					-0.06894581101369113
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1179.525683581829	1	1179.52045	1178.51317	2.6108	0.0030794	0.58394	0.00068877	3.1947	0.0037682	1179.5209729110843	64.295	0.39695	65.702	65.497	65.894	1.4071					27	12	3	0	0	0	0.029093	2	26973	26973;27025		88.904	50.93	1	2049800			20266	2393	9856	9895	23370;23371	23370					-0.06894581101369113
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.2646362185478	2	590.263862	1178.51317	2.9527	0.0017429	-0.91656	-0.00054101	2.0361	0.0012018	590.2634532932636	63.852	0.55569	65.78	65.457	66.012	1.928					51	17	4	0	0	0	0.0082953	4	26757	26708;26757;26805;26847		109.63	71.454	1	14018000			20267	2393	9856	9895	23372;23373;23374;23375	23373					-0.06894581101369113
LPTEEEWEF	9	Unmodified	_LPTEEEWEF_					0	0	0		nc|ENSG00000129103|Q8NBJ7-2|SUMF2;ENSG00000129103|ENST00000434526|SUMF2;nc|ENSG00000129103|Q8NBJ7-3|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	nc|ENSG00000129103|Q8NBJ7-2|SUMF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1179.525927722454	1	1179.52045	1178.51317	2.4148	0.0028483	0.021599	2.5477E-05	2.4364	0.0028738	1179.5196236219315	63.833	0.36803	65.761	65.52	65.888	1.928					18	11	2	0	0	0	0.031324	1	26789	26789		85.357	53.051	1	1677500			20268	2393	9856	9895	23376	23376					-0.06894581101369113
LPTEENFLL	9	Unmodified	_LPTEENFLL_					0	0	0		nc|ENSG00000104327|P05937-2|CALB1;ENSG00000104327|ENST00000265431|CALB1;CALB2|p.C101Y|1|0.23|ENSG00000172137|chr16:71377707-71377707|G/A|missense_variant;ENSG00000172137|ENST00000302628|CALB2	nc|ENSG00000104327|P05937-2|CALB1	nc|ENSG00000104327|P05937-2|CALB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2886840701103	2	538.28714	1074.55973	3.1429	0.0016918	-0.16728	-9.0043E-05	2.9756	0.0016018	538.286763262657	70.499	0.38594	71.853	71.616	72.002	1.3536					22	11	3	0	0	0	0.031324	1	29579	29579		85.357	14.223	1	4012100			20269	1457	9857	9896	23377	23377					0.02542903520566142
LPTFMLLF	8	Unmodified	_LPTFMLLF_					0	0	0			REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2792236208916	2	491.277532	980.540511	1.1434	0.00056171	4.0415	0.0019855	5.1849	0.0025472	491.27916792966784	52.283	0.28228	53.679	53.492	53.774	1.3966					13	8	2	0	0	0	0.42763	1	21865	21865		52.693	14.542	1	1177100	+		20270	13939	9858	9897	23378	23378					0.04946275695965596
LPTFMLLF	8	Unmodified	_LPTFMLLF_					0	0	0			REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.277532	980.540511	1.1434	0.00056171	4.0415	0.0019855	5.1849	0.0025472	491.27916792966784	52.283	0.28228	53.679	53.492	53.774	1.3966	0.023468	7.8532E-05	NaN	52.693	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1177100	+		20271	13939	9858	9897							0.04946275695965596
LPTFMLLF	8	Unmodified	_LPTFMLLF_					0	0	0			REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	REV__ENST00000566239.1_1_15:65822954-65844187:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.277532	980.540511	0.86106	0.00042302	3.9126	0.0019222	4.7737	0.0023452	491.2795026760292	51.66	0.31326	53.632	53.426	53.739	1.9722	-0.023468	-4.8089E-05	NaN	52.693	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1157600	+		20272	13939	9858	9897							0.04946275695965596
LPTFQTNLTF	10	Unmodified	_LPTFQTNLTF_					0	0	0		CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant;CIC|p.V1007Afs*28|1|0.32|ENSG00000079432|chr19:42292310-42292322|GTGCAGTCAGCGG/-|frameshift_variant;ENSG00000079432|ENST00000681038|CIC	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3158447146416	2	591.313689	1180.61282	2.4971	0.0014766	-0.01981	-1.1714E-05	2.4773	0.0014649	591.3140921710452	77.718	0.3139	78.999	78.823	79.137	1.2809					24	9	3	0	0	0	0.51515	1	32589	32589		26.884	10.735	1	2929200			20273	308	9859	9898	23379	23379					0.02974281303204407
LPTFQTNLTF	10	Unmodified	_LPTFQTNLTF_					0	0	0		CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant;CIC|p.V1007Afs*28|1|0.32|ENSG00000079432|chr19:42292310-42292322|GTGCAGTCAGCGG/-|frameshift_variant;ENSG00000079432|ENST00000681038|CIC	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3155395388603	2	591.313689	1180.61282	1.4009	0.0008284	1.1814	0.00069857	2.5823	0.001527	591.3141169642686	77.211	0.35023	78.962	78.849	79.2	1.7514					25	10	3	0	0	0	0.51515	1	32362	32362		26.884	7.6267	1	3232100			20274	308	9859	9898	23380	23380					0.02974281303204407
LPTKMERFRTK	11	Unmodified	_LPTKMERFRTK_					0	0	0		ENSG00000198954|ENST00000361983|KIFBP	ENSG00000198954|ENST00000361983|KIFBP	ENSG00000198954|ENST00000361983|KIFBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	352.4517700076103	4	352.453874	1405.78639	-2.429	-0.0008561	-2.9913	-0.0010543	-5.4203	-0.0019104	352.4529410189639	11.772	0.15262	11.772	11.696	11.849	0					10	4	3	0	0	0	1.0156	1	4864	4864		2.8433	0.4085	1	1195900			20275	5110	9860	9899	23381	23381					0.09972743807838924
LPTNLFLLF	9	Unmodified	_LPTNLFLLF_					0	0	0		ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3208495974541	2	539.320786	1076.62702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.552	1	68.441	67.941	68.941	1.8889								0	0	0	0.36184	1	27916	27916		12.532	0	1				20276	3531	9861	9900	23382	23382					0.0917697852216861
LPTPHSFKI	9	Unmodified	_LPTPHSFKI_					0	0	0		nc|ENSG00000163081|Q96MF4|CCDC140	nc|ENSG00000163081|Q96MF4|CCDC140	nc|ENSG00000163081|Q96MF4|CCDC140	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.8037597537041	2	520.300384	1038.58622	0.82238	0.00042789	3.2777	0.0017054	4.1	0.0021333	520.3022542797751	51.671	0.46632	53.643	53.426	53.892	1.9722					44	14	4	0	0	0	0.30098	1	21717	21717		25.399	3.6527	1	19669000			20277	7910	9862	9901	23383	23383					0.06846637202556849
LPTVGCRDW	9	Unmodified	_LPTVGCRDW_					0	0	0		ENSG00000175894|ENST00000323084|TSPEAR;TSPEAR|p.S631R|1|0.17|ENSG00000175894|chr21:44499900-44499900|G/T|missense_variant	ENSG00000175894|ENST00000323084|TSPEAR	ENSG00000175894|ENST00000323084|TSPEAR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1046.517382800579	1	1046.50878	1045.5015	3.018	0.0031583	1.9286	0.0020183	4.9466	0.0051766	1046.5091283315926	74.768	0.24791	76.074	75.966	76.214	1.3063					11	7	2	0	0	0	0.22519	1	31393	31393		30.225	12.09	1	1465000			20278	4388	9863	9902	23384	23384					-0.01943056605705351
LPTWWLLS	8	Unmodified	_LPTWWLLS_					0	0	0		ENST00000506360.5_1_4:8220037-8234255:+|nuORF	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	ENST00000506360.5_1_4:8220037-8234255:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2781249880791	2	508.284203	1014.55385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.126	1	66.126	65.626	66.626	0								0	0	0	1.0178	1	27549	27549		20.871	2.7362	1				20279	7004	9864	9903	23385	23385					0.04715849799561056
LPVAKKVF	8	Unmodified	_LPVAKKVF_					0	0	0		tr|A0A553SNR7|A0A553SNR7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25055PE=3SV=1	tr|A0A553SNR7|A0A553SNR7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25055PE=3SV=1	tr|A0A553SNR7|A0A553SNR7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_25055PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2030822634697	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.94	1	101	100.5	101.5	0.067009								0	0	0	1.0178	1	42257	42257		0.45834	0	1				20280	16433	9865	9904	23386	23386					0.12540744041848484
LPVATDFEF	9	Unmodified	_LPVATDFEF_					0	0	0		ENSG00000112584|ENST00000476287|FAM120B;nc|ENSG00000112584|Q96EK7-2|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1038.511157214642	1	1038.51424	1037.50696	3.5817	0.0037197	-2.796	-0.0029037	0.78571	0.00081597	1038.5122228434295	72.939	0.22105	74.75	74.607	74.828	1.8101					11	6	2	0	0	0	0.11478	1	30598	30598		44.407	30.899	1	746690			20281	1789	9866	9905	23387	23387					-0.010290545422321884
LPVATDFEF	9	Unmodified	_LPVATDFEF_					0	0	0		ENSG00000112584|ENST00000476287|FAM120B;nc|ENSG00000112584|Q96EK7-2|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	ENSG00000112584|ENST00000476287|FAM120B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1038.51424	1037.50696	2.9585	0.0030725	4.6259	0.004804	7.5844	0.0078765	1038.5178882316136	73.414	0.15633	74.732	74.685	74.841	1.318	-0.0086094	0.0038721	NaN	44.407	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892120			20282	1789	9866	9905							-0.010290545422321884
LPVCPTFTIWN	11	Unmodified	_LPVCPTFTIWN_					0	0	0		nc|ENSG00000080561|Q9UJV3-2|MID2;ENSG00000080561|ENST00000262843|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	nc|ENSG00000080561|Q9UJV3-2|MID2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8894225955009	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.027	1	80.762	80.262	81.262	1.735								0	0	0	0.63775	1	33144	33144		0.50596	0.051438	1				20283	1004	9867	9906	23388	23388					0.014592008395311495
LPVDLAEEL	9	Unmodified	_LPVDLAEEL_					0	0	0		chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A;nc|ENSG00000147889|P42771-2|CDKN2A;chr9:21971208-21994821|396|35.51|0.28|6.98|-|ENST00000498628|CDKN2A,CDKN2A;chr9:21971208-21993882|361|15.26|0.25|5.93|-|ENST00000494262|CDKN2A,CDKN2A;chr9:21968242-21970976|392|36.14|0.04|9.93|-|ENST00000579122|CDKN2A,CDKN2A;ENSG00000147889|ENST00000304494|CDKN2A;nc|ENSG00000147889|P42771-4|CDKN2A;chr9:21968771-21970902|385|36.42|0.1|8.46|-|ENST00000498124|CDKN2A,CDKN2A;SMC5-CDKN2A|1|fusion;SMC5-CDKN2A|2|fusion	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7756835818291	2	499.773865	997.533177	1.9753	0.00098719	0.4788	0.00023929	2.4541	0.0012265	499.77387221634234	69.064	0.51402	70.43	70.187	70.701	1.3657					51	16	4	0	0	0	0.03795	2	28931	28931;29035		77.984	24.409	1	22887000			20284	297	9868	9907	23389;23390	23389					0.034312146292336365
LPVDLAEEL	9	Unmodified	_LPVDLAEEL_					0	0	0		chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A;nc|ENSG00000147889|P42771-2|CDKN2A;chr9:21971208-21994821|396|35.51|0.28|6.98|-|ENST00000498628|CDKN2A,CDKN2A;chr9:21971208-21993882|361|15.26|0.25|5.93|-|ENST00000494262|CDKN2A,CDKN2A;chr9:21968242-21970976|392|36.14|0.04|9.93|-|ENST00000579122|CDKN2A,CDKN2A;ENSG00000147889|ENST00000304494|CDKN2A;nc|ENSG00000147889|P42771-4|CDKN2A;chr9:21968771-21970902|385|36.42|0.1|8.46|-|ENST00000498124|CDKN2A,CDKN2A;SMC5-CDKN2A|1|fusion;SMC5-CDKN2A|2|fusion	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	998.5427734255791	1	998.540454	997.533177	2.8225	0.0028184	-0.64745	-0.00064651	2.175	0.0021719	998.5396031890701	69.121	0.4812	70.486	70.22	70.701	1.3657					48	15	4	0	0	0	4.4424E-05	3	28990	28941;28990;29046		154.46	52.741	1	24478000			20285	297	9868	9907	23391;23392;23393	23392					0.034312146292336365
LPVDLAEEL	9	Unmodified	_LPVDLAEEL_					0	0	0		chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A;nc|ENSG00000147889|P42771-2|CDKN2A;chr9:21971208-21994821|396|35.51|0.28|6.98|-|ENST00000498628|CDKN2A,CDKN2A;chr9:21971208-21993882|361|15.26|0.25|5.93|-|ENST00000494262|CDKN2A,CDKN2A;chr9:21968242-21970976|392|36.14|0.04|9.93|-|ENST00000579122|CDKN2A,CDKN2A;ENSG00000147889|ENST00000304494|CDKN2A;nc|ENSG00000147889|P42771-4|CDKN2A;chr9:21968771-21970902|385|36.42|0.1|8.46|-|ENST00000498124|CDKN2A,CDKN2A;SMC5-CDKN2A|1|fusion;SMC5-CDKN2A|2|fusion	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7749511599541	2	499.773865	997.533177	1.504	0.00075167	0.61669	0.0003082	2.1207	0.0010599	499.77399834593325	68.601	0.5526	70.454	70.185	70.737	1.853					46	17	4	0	0	0	0.01705	2	28755	28713;28755		101.72	12.295	1	28419000			20286	297	9868	9907	23394;23395	23395					0.034312146292336365
LPVDLAEEL	9	Unmodified	_LPVDLAEEL_					0	0	0		chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A;nc|ENSG00000147889|P42771-2|CDKN2A;chr9:21971208-21994821|396|35.51|0.28|6.98|-|ENST00000498628|CDKN2A,CDKN2A;chr9:21971208-21993882|361|15.26|0.25|5.93|-|ENST00000494262|CDKN2A,CDKN2A;chr9:21968242-21970976|392|36.14|0.04|9.93|-|ENST00000579122|CDKN2A,CDKN2A;ENSG00000147889|ENST00000304494|CDKN2A;nc|ENSG00000147889|P42771-4|CDKN2A;chr9:21968771-21970902|385|36.42|0.1|8.46|-|ENST00000498124|CDKN2A,CDKN2A;SMC5-CDKN2A|1|fusion;SMC5-CDKN2A|2|fusion	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	chr9:21971208-21971329|387|20.86|0.2|6.72|-|ENST00000497750|CDKN2A,CDKN2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	998.5428344607353	1	998.540454	997.533177	2.0677	0.0020647	-0.42966	-0.00042904	1.638	0.0016356	998.53978989109	68.604	0.43036	70.457	70.217	70.648	1.853					39	13	4	0	0	0	4.4424E-05	3	28719	28719;28768;28822		154.46	52.741	1	19435000			20287	297	9868	9907	23396;23397;23398	23396					0.034312146292336365
LPVFLLQYWEK	11	Unmodified	_LPVFLLQYWEK_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|230|2|anti-sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|230|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	718.4020263552666	2	718.402838	1434.79112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.87	1	112.91	112.41	113.41	0.044189								0	0	0	0.63775	1	48630	48630		6.2058	0	1		+		20288	14291	9869	9908	23399	23399					0.09111951222280368
LPVKFAIFRT	10	Unmodified	_LPVKFAIFRT_					0	0	0			REV__nc|ENSG00000144048|O75319-2|DUSP11	REV__nc|ENSG00000144048|O75319-2|DUSP11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.3721801638603	2	596.366059	1190.71756	2.4753	0.0014762	2.1925	0.0013076	4.6679	0.0027837	596.3673701036579	86.676	0.43401	86.92	86.69	87.124	0.24386					33	17	2	0	0	0	0.89803	1	36286	36286		1.4819	0	1	6142400	+		20289	10235	9870	9909	23400	23400					0.12983447570445605
LPVKFAIFRT	10	Unmodified	_LPVKFAIFRT_					0	0	0			REV__nc|ENSG00000144048|O75319-2|DUSP11	REV__nc|ENSG00000144048|O75319-2|DUSP11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	596.366059	1190.71756	2.4753	0.0014762	2.1925	0.0013076	4.6679	0.0027837	596.3673701036579	86.676	0.43401	86.92	86.69	87.124	0.24386	0.19588	0.00070654	NaN	1.4819	33	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6142400	+		20290	10235	9870	9909							0.12983447570445605
LPVLNIDGYI	10	Unmodified	_LPVLNIDGYI_					0	0	0		ENSG00000144410|ENST00000272852|CPO;ENSG00000153002|ENST00000282957|CPB1	ENSG00000144410|ENST00000272852|CPO	ENSG00000144410|ENST00000272852|CPO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8184081912041	2	558.818607	1115.62266	2.1436	0.0011979	1.3812	0.00077183	3.5248	0.0019697	558.8178581501594	65.956	0.48254	67.355	67.124	67.606	1.3989					32	15	3	0	0	0	0.40874	1	27672	27672		32.786	5.1569	1	3534800			20291	3076	9871	9910	23401	23401					0.06947469308624932
LPVLVVLRVVV	11	Unmodified	_LPVLVVLRVVV_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	603.5389282107353	2	603.420834	1204.82712	2.6449	0.001596	-4.4228	-0.0026688	-1.7779	-0.0010728	603.4175347702446	107.22	0.17049	107.28	107.22	107.39	0.052452					9	7	2	0	0	0	0.14606	1	45809	45809		0.30703	0	1	4029100	+		20292	14076	9872	9911	23402	23402					0.23289453189772757
LPVMLAVIA	9	Unmodified	_LPVMLAVIA_					0	0	0		tr|A0A553SF67|A0A553SF67_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_08365PE=4SV=1	tr|A0A553SF67|A0A553SF67_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_08365PE=4SV=1	tr|A0A553SF67|A0A553SF67_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_08365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	926.5828124880791	1	926.574337	925.56706	4.2554	0.0039429	0.79586	0.00073742	5.0512	0.0046804	926.5752550286869	91.19	0.22033	92.172	92.039	92.259	0.98156					11	6	2	0	0	0	0.24585	1	38423	38423		28.173	0	1	603370			20293	16044	9873	9912	23403	23403					0.1012996458730413
LPVNNVKKV	9	Unmodified	_LPVNNVKKV_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.8215820193291	2	505.821484	1009.62842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.915	1	46.875	46.375	47.375	1.9596								0	0	0	0.36184	1	18821	18821		12.532	1.7076	1				20294	3237	9874	9913	23404	23404					0.12398612610945747
LPVNWIMMK	9	Unmodified	_LPVNWIMMK_					0	0	0		ENST00000216218.7_1_22:41228589-41228634:-|nuORF	ENST00000216218.7_1_22:41228589-41228634:-|nuORF	ENST00000216218.7_1_22:41228589-41228634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1131.608813464642	1	1131.60532	1130.59804	3.1106	0.00352	1.0758	0.0012174	4.1864	0.0047374	1131.606718800158	101.01	0.23458	101.22	101.12	101.36	0.20526					14	7	3	0	0	0	0.75267	1	42500	42500		5.2307	0	1	72954000			20295	5518	9875	9914	23405	23405					0.037967946298749666
LPVPAFNVI	9	Unmodified	_LPVPAFNVI_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1;ENO2|p.N154K|1|0.23|ENSG00000111674|chr12:6917957-6917957|T/A|missense_variant;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;ENO3|p.N286Lfs*13|1|0.08|ENSG00000108515|chr17:4955593-4955594|-/GCTT|frameshift_variant;ENO3|p.Y287Pfs*20|1|0.07|ENSG00000108515|chr17:4955595-4955596|-/ACCCGGGAGGCGGAGGTTGCGCCATTGC|frameshift_variant;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2928954958916	2	485.292028	968.569503	3.3033	0.0016031	-0.29666	-0.00014397	3.0067	0.0014591	485.29203119564727	81.222	0.34087	82.456	82.316	82.656	1.2332					15	10	2	0	0	0	0.098957	1	34110	34110		49.669	17.552	1	820500			20296	919	9876	9915	23406	23406					0.08396136316616776
LPVPAFNVI	9	Unmodified	_LPVPAFNVI_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1;nc|ENSG00000074800|P06733-2|ENO1;ENO2|p.N154K|1|0.23|ENSG00000111674|chr12:6917957-6917957|T/A|missense_variant;ENST00000521659.5_2_17:4855435-4858958:+|nuORF;ENO3|p.N286Lfs*13|1|0.08|ENSG00000108515|chr17:4955593-4955594|-/GCTT|frameshift_variant;ENO3|p.Y287Pfs*20|1|0.07|ENSG00000108515|chr17:4955595-4955596|-/ACCCGGGAGGCGGAGGTTGCGCCATTGC|frameshift_variant;nc|ENSG00000111674|P09104-2|ENO2;nc|ENSG00000108515|P13929-3|ENO3;ENSG00000111674|ENST00000229277|ENO2;ENSG00000108515|ENST00000519602|ENO3	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2923461794853	2	485.292028	968.569503	2.2427	0.0010884	-0.17527	-8.5058E-05	2.0674	0.0010033	485.29220432530815	80.806	0.27647	82.502	82.364	82.64	1.6959					14	8	2	0	0	0	0.3154	1	33924	33924		24.674	6.5389	1	640590			20297	919	9876	9915	23407	23407					0.08396136316616776
LPVPPITALI	10	Unmodified	_LPVPPITALI_					0	0	0		ENSG00000176142|ENST00000319172|TMEM39A;ENST00000486159.5_1_3:119156911-119180963:-|nuORF;nc|ENSG00000176142|Q9NV64-2|TMEM39A;ENST00000486235.5_1_3:119165863-119180852:-|nuORF	ENSG00000176142|ENST00000319172|TMEM39A	ENSG00000176142|ENST00000319172|TMEM39A	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2271301150322	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.59	1	104.75	104.25	105.25	0.16055								0	0	0	0.66218	1	44346	44346		0.77653	0.31819	1				20298	4396	9877	9916	23408	23408					0.1432955155628406
LPVPTALTV	9	Unmodified	_LPVPTALTV_					0	0	0		nc|ENSG00000125319|Q8N3J3-3|HROB;ENSG00000125319|ENST00000585683|HROB;nc|ENSG00000125319|Q8N3J3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	nc|ENSG00000125319|Q8N3J3-3|HROB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.7853576540947	2	455.784036	909.553519	3.1324	0.0014277	-0.21467	-9.7841E-05	2.9177	0.0013298	455.783996939694	63.93	0.52602	65.858	65.582	66.108	1.928					42	16	3	0	0	0	0.3154	1	26875	26875		24.674	0	1	5240300			20299	2256	9878	9917	23409	23409					0.09512430079689693
LPVYFAFSP	9	Unmodified	_LPVYFAFSP_					0	0	0			REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7825805544853	2	520.776211	1039.53787	4.3097	0.0022444	0.79798	0.00041557	5.1077	0.00266	520.7762458368384	89.789	0.53304	91.193	91.019	91.552	1.4045					22	16	2	0	0	0	0.41943	1	37825	37825		19.439	1.304	1	948800	+		20300	9822	9879	9918	23410	23410					0.019681435626580424
LPVYFAFSP	9	Unmodified	_LPVYFAFSP_					0	0	0			REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	520.776211	1039.53787	4.6776	0.002436	3.9737	0.0020694	8.6513	0.0045054	520.7785525224442	90.215	0.16019	91.235	91.147	91.307	1.0199	0.020587	0.002278	NaN	19.439	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	854860	+		20301	9822	9879	9918							0.019681435626580424
LPVYFAFSP	9	Unmodified	_LPVYFAFSP_					0	0	0			REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	520.776211	1039.53787	4.3097	0.0022444	0.79798	0.00041557	5.1077	0.00266	520.7762458368384	89.789	0.53304	91.193	91.019	91.552	1.4045	-0.020587	-0.0010297	NaN	19.439	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	948800	+		20302	9822	9879	9918							0.019681435626580424
LPWCVLAL	8	Carbamidomethyl (C)	_LPWC(Carbamidomethyl (C))VLAL_	LPWC(1)VLAL		LPWC(52)VLAL		0	1	0			REV__L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|25|3|sense	REV__L1PA13_dup8637|chr21:8327096-8327843:-|2.0869428863339463|0.0016665760926509|10.29|371.0|25|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2737914919853	2	486.272781	970.531009	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.081	1	31.896	31.396	32.396	1.8151								0	0	0	0.81515	1	12610	12610		52.334	10.517	1		+		20303	14298	9880	9919	23411	23411					0.04456507410429822
LPWGRPRTF	9	Unmodified	_LPWGRPRTF_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.7157470583916	2	565.3169	1128.61925	2.8456	0.0016087	-2.8503	-0.0016113	-0.0047383	-2.6786E-06	565.3162319074912	79.168	0.31325	80.435	80.284	80.598	1.2668					14	9	2	0	0	0	0.11645	1	33296	33296		4.756	0.42677	1	335820			20304	1893	9881	9920	23412	23412					0.060082640452719716
LPWGRPRTF	9	Unmodified	_LPWGRPRTF_					0	0	0		nc|ENSG00000114993|Q9BST9-3|RTKN;nc|ENSG00000114993|Q9BST9-2|RTKN;ENSG00000114993|ENST00000272430|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	nc|ENSG00000114993|Q9BST9-3|RTKN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	565.3169	1128.61925	2.3046	0.0013029	-5.486	-0.0031013	-3.1813	-0.0017985	565.3134467401038	78.662	0.21748	80.397	80.289	80.506	1.735	-0.018679	-0.0017041	NaN	4.756	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410750			20305	1893	9881	9920							0.060082640452719716
LPWPHPSP	8	Unmodified	_LPWPHPSP_					0	0	0		ENST00000523099.5_1_8:144124388-144124505:+|nuORF;ENST00000524181.5_1_8:144124388-144125605:+|nuORF;ENST00000395172.5_1_8:144124388-144130666:+|nuORF	ENST00000523099.5_1_8:144124388-144124505:+|nuORF	ENST00000523099.5_1_8:144124388-144124505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.4866821169853	1	930.483214	929.475937	2.5676	0.0023891	-1.8505	-0.0017218	0.71711	0.00066726	930.4815630887036	87.102	0.88319	87.102	86.551	87.434	0					113	35	4	0	0	0	0.88504	1	36521	36521		5.7604	0.52976	1	83513000			20306	6290	9882	9921	23413	23413					0.008378369341812686
LPWQKKEKQS	10	Unmodified	_LPWQKKEKQS_					0	0	0			REV__ENST00000284425.6_1_17:67087362-67092889:-|nuORF	REV__ENST00000284425.6_1_17:67087362-67092889:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3597900271416	2	636.358962	1270.70337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.31	1	104.48	103.98	104.98	0.1731								0	0	0	0.66052	1	44096	44096		3.5965	0.31518	1		+		20307	12266	9883	9922	23414	23414					0.07884750351513503
LPYNEILYFA	10	Unmodified	_LPYNEILYFA_					0	0	0			REV__ENSG00000197386|ENST00000355072|HTT	REV__ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	621.8267700076103	2	621.823889	1241.63323	1.6592	0.0010317	2.5383	0.0015784	4.1974	0.0026101	621.8258419770758	45.831	0.43918	46.16	45.926	46.365	0.32899					16	13	2	0	0	0	0.82659	1	19248	19248		9.3831	1.2276	1	446910	+		20308	11671	9884	9923	23415	23415					0.02207451963067797
LPYNEILYFA	10	Unmodified	_LPYNEILYFA_					0	0	0			REV__ENSG00000197386|ENST00000355072|HTT	REV__ENSG00000197386|ENST00000355072|HTT	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	621.823889	1241.63323	1.6592	0.0010317	2.5383	0.0015784	4.1974	0.0026101	621.8258419770758	45.831	0.43918	46.16	45.926	46.365	0.32899	-0.10451	-0.00027809	NaN	9.3831	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	446910	+		20309	11671	9884	9923							0.02207451963067797
LPYNEILYFA	10	Unmodified	_LPYNEILYFA_					0	0	0			REV__ENSG00000197386|ENST00000355072|HTT	REV__ENSG00000197386|ENST00000355072|HTT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	621.823889	1241.63323	2.302	0.0014314	2.9573	0.0018389	5.2593	0.0032704	622.3270909716069	45.004	0.41612	46.369	46.18	46.596	1.3653	0.10451	0.00024303	NaN	9.3831	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	418900	+		20310	11671	9884	9923							0.02207451963067797
LPYRDIIGL	9	Unmodified	_LPYRDIIGL_					0	0	0		ENSG00000100583|ENST00000216471|SAMD15	ENSG00000100583|ENST00000216471|SAMD15	ENSG00000100583|ENST00000216471|SAMD15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3135864138603	2	530.313492	1058.61243	1.0308	0.00054664	0.41422	0.00021967	1.445	0.00076631	530.3142869533281	57.228	0.30244	58.642	58.491	58.794	1.4145					16	10	2	0	0	0	0.46905	1	23978	23978		16.942	6.1184	1	1581800			20311	1289	9885	9924	23416	23416					0.08546906374044738
LPYRDIIGL	9	Unmodified	_LPYRDIIGL_					0	0	0		ENSG00000100583|ENST00000216471|SAMD15	ENSG00000100583|ENST00000216471|SAMD15	ENSG00000100583|ENST00000216471|SAMD15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3138915896416	2	530.313492	1058.61243	1.0592	0.00056173	0.84717	0.00044927	1.9064	0.001011	530.3140569799726	56.648	0.23429	58.616	58.516	58.751	1.9684					13	7	2	0	0	0	0.11077	1	23771	23771		45.74	11.338	1	1527600			20312	1289	9885	9924	23417	23417					0.08546906374044738
LPYRRPPSI	9	Unmodified	_LPYRRPPSI_					0	0	0		nc|ENSG00000138443|Q9NYB9-3|ABI2;ENST00000441061.5_2_2:204231693-204292072:+|nuORF;nc|ENSG00000138443|Q9NYB9-2|ABI2;nc|ENSG00000138443|Q9NYB9-4|ABI2;nc|ENSG00000138443|Q9NYB9|ABI2;ABI2|p.E467Kfs*27|1|0.4|ENSG00000138443|chr2:203427208-203427208|G/-|frameshift_variant;ENSG00000138443|ENST00000261018|ABI2	nc|ENSG00000138443|Q9NYB9-3|ABI2	nc|ENSG00000138443|Q9NYB9-3|ABI2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2178832888603	2	549.824558	1097.63456	2.7835	0.0015304	-1.0731	-0.00059004	1.7103	0.00094038	549.8243702970974	69.841	0.38012	71.679	71.468	71.849	1.8378					26	11	3	0	0	0	0.11333	1	29345	29345		8.5933	0	1	2141400			20313	11	9886	9925	23418	23418					0.08965130842466351
LPYSGEILL	9	Unmodified	_LPYSGEILL_					0	0	0			REV__ENST00000542362.1_1_12:133218156-133218763:-|nuORF	REV__ENST00000542362.1_1_12:133218156-133218763:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2873412966728	2	502.786776	1003.559	2.4857	0.0012498	-4.0589	-0.0020408	-1.5733	-0.00079102	503.2852845698689	72.34	0.46344	74.15	73.921	74.385	1.8101					48	14	4	0	0	0	0.3154	1	30373	30373		24.674	0	1	3030200	+		20314	13786	9887	9926	23419	23419					0.05736108871542456
LQAEIEGLK	9	Unmodified	_LQAEIEGLK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__REFSEQ:XP_092267;ENST00000562317.1_1_16:78082520-78083381:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7875244021416	2	500.787307	999.560061	1.0192	0.00051043	0.62669	0.00031384	1.6459	0.00082427	500.78728036938617	28.802	0.27439	30.085	29.917	30.191	1.2825					20	8	4	0	0	0	0.026411	2	12093	12045;12093		93.166	22.834	1	4366200		+	20315	343	9888	9927	23420;23421	23421					0.06026323240428155
LQAEIEGLK	9	Unmodified	_LQAEIEGLK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__REFSEQ:XP_092267;ENST00000562317.1_1_16:78082520-78083381:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7873412966728	2	500.787307	999.560061	0.5072	0.000254	-0.28342	-0.00014193	0.22378	0.00011207	500.78704439959586	28.287	0.30233	30.062	29.85	30.152	1.7754					20	9	3	0	0	0	0.014947	2	11815	11815;11874		103.42	23.823	1	4315200		+	20316	343	9888	9927	23422;23423	23422					0.06026323240428155
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2674133181572	3	437.267463	1308.78056	1.1167	0.00048828	0.32096	0.00014035	1.4376	0.00062862	437.26739026282524	37.753	0.57952	37.753	37.574	38.154	0					29	19	2	0	0	0	1.0191	1	15939	15939		2.6312	0.72486	1	1537800			20317	7074	9889	9928	23424	23424					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.6027404665947	3	437.267463	1308.78056	1.1432	0.00049989	0.97119	0.00042467	2.1144	0.00092456	437.26771099798725	38.464	0.52911	38.464	38.208	38.737	0					33	23	2	0	0	0	1.0191	1	16158	16158		2.6312	0.72486	1	2050300			20318	7074	9889	9928	23425	23425					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2017394900322	4	328.202416	1308.78056	0.88873	0.00029168	-1.0817	-0.00035501	-0.19297	-6.3332E-05	328.20165622248624	37.018	0.62138	37.323	37.048	37.67	0.30497					89	31	4	0	0	0	1.0224	1	15707	15707		2.4348	0	1	12820000			20319	7074	9889	9928	23426	23426					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2681152224541	3	437.267463	1308.78056	1.9552	0.00085494	0.042359	1.8522E-05	1.9976	0.00087346	437.2672560857812	37.488	0.34004	37.793	37.626	37.966	0.30497					18	12	2	0	0	0	1.0191	1	15792	15792		2.6312	0.37851	1	1214200			20320	7074	9889	9928	23427	23427					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2679015994072	3	437.267463	1308.78056	1.972	0.00086227	-0.58053	-0.00025384	1.3914	0.00060843	437.2671874727188	37.828	0.30166	38.133	37.938	38.24	0.30497					17	11	2	0	0	0	1.0191	1	15929	15929		2.6312	0.54727	1	1936500			20321	7074	9889	9928	23428	23428					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2687866091728	3	437.267463	1308.78056	2.038	0.00089113	1.2624	0.00055199	3.3003	0.0014431	437.26777768687555	39.19	0.81233	39.499	38.919	39.731	0.30857					68	26	3	0	0	0	1.0362	2	16377	16377;16428		1.3296	0	1	2674100			20322	7074	9889	9928	23429;23430	23429					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.4523803591728	4	328.202416	1308.78056	-0.95799	-0.00031442	0.24679	8.0996E-05	-0.71121	-0.00023342	328.20226472412736	35.606	0.401	36.881	36.661	37.062	1.2746					91	32	3	0	0	0	0.98969	1	14877	14877		4.4062	1.3339	1	12916000			20323	7074	9889	9928	23431	23431					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2023803591728	4	328.202416	1308.78056	0.21589	7.0857E-05	-1.2577	-0.00041279	-1.0418	-0.00034193	328.20183655551284	34.636	0.29819	36.459	36.371	36.669	1.8227					52	30	2	0	0	0	1.0156	1	14514	14514		2.8433	0.10809	1	19821000			20324	7074	9889	9928	23432	23432					0.13851968567837503
LQAGKILLYYK	11	Unmodified	_LQAGKILLYYK_					0	0	0		ENST00000523989.1_1_8:43052051-43052222:+|nuORF;ENST00000519705.1_1_8:43052051-43054709:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	ENST00000523989.1_1_8:43052051-43052222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.4533569216728	4	328.202416	1308.78056	0.20818	6.8325E-05	-1.3578	-0.00044564	-1.1497	-0.00037732	328.20160328390904	35.134	0.40782	36.951	36.752	37.159	1.8176					91	35	3	0	0	0	1.0191	1	14737	14737		2.6312	0.19645	1	11663000			20325	7074	9889	9928	23433	23433					0.13851968567837503
LQALGQLLRGL	11	Unmodified	_LQALGQLLRGL_					0	0	0			REV__ENSG00000187492|ENST00000412678|CDHR4	REV__ENSG00000187492|ENST00000412678|CDHR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3752929568291	2	591.371872	1180.72919	2.0931	0.0012378	1.4735	0.00087138	3.5666	0.0021092	591.3728472748866	78.982	0.30737	80.717	80.506	80.814	1.735					23	9	3	0	0	0	0.77451	1	33158	33158		16.149	0.90062	1	2257700	+		20326	11533	9890	9929	23434	23434					0.14605644593825673
LQAPFIKKFF	10	Unmodified	_LQAPFIKKFF_					0	0	0			REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8713256716728	2	619.868434	1237.72232	2.3482	0.0014556	2.1843	0.001354	4.5325	0.0028095	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.89422	1	33524	33524		1.8442	0	1	8928300	+		20327	15543	9891	9930	23435	23435					0.11296331713197105
LQAPFIKKFF	10	Unmodified	_LQAPFIKKFF_					0	0	0			REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	REV__tr|A0A7D6VWN1|A0A7D6VWN1_9CLOTDicarboxylate/aminoacid:cationsymporterOS=ClostridiumintestinaleOX=36845GN=HZF06_04800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8694335818291	2	619.868434	1237.72232	1.6831	0.0010433	1.8326	0.001136	3.5157	0.0021792	619.8694541892436	78.724	1.1738	80.459	80.319	81.493	1.735					52	37	2	0	0	0	0.89422	2	33257	33257;33305		1.8442	0	1	2771900	+		20328	15543	9891	9930	23436;23437	23436					0.11296331713197105
LQCVRKRLLH	10	Unmodified	_LQCVRKRLLH_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5919677615166	3	422.592286	1264.75503	0.65775	0.00027796	0.23185	9.7978E-05	0.8896	0.00037594	422.5923175269455	36.75	0.48708	36.75	36.584	37.071	0					56	24	3	0	0	0	0.88031	1	15446	15446		3.5871	0.26742	1	8115700			20329	5041	9892	9931	23438	23438					0.13324215564421138
LQCVRKRLLH	10	Unmodified	_LQCVRKRLLH_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.5927917361259	3	422.592286	1264.75503	0.81639	0.000345	-0.13943	-5.8923E-05	0.67695	0.00028608	422.5921647102681	33.718	0.28762	35.54	35.35	35.637	1.8227					41	27	2	0	0	0	0.85995	1	14152	14152		5.7834	2.4638	1	15042000			20330	5041	9892	9931	23439	23439					0.13324215564421138
LQCVRKRLLH	10	Unmodified	_LQCVRKRLLH_					0	0	0		nc|ENSG00000198089|A8K8P3-4|SFI1;nc|ENSG00000198089|A8K8P3-10|SFI1;nc|ENSG00000198089|A8K8P3-3|SFI1;nc|ENSG00000198089|A8K8P3-9|SFI1;nc|ENSG00000198089|A8K8P3-2|SFI1;ENSG00000198089|ENST00000400288|SFI1;ENST00000382162.7_1_22:32002284-32014401:+|nuORF	nc|ENSG00000198089|A8K8P3-4|SFI1	nc|ENSG00000198089|A8K8P3-4|SFI1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	422.592286	1264.75503	0.38648	0.00016332	1.1838	0.00050028	1.5703	0.0006636	422.5928765355281	34.084	0.26704	35.359	35.211	35.478	1.2746	-0.090743	0.00083514	NaN	5.7834	38	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11289000			20331	5041	9892	9931							0.13324215564421138
LQDVAFEYAR	10	Unmodified	_LQDVAFEYAR_					0	0	0			REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.5394470095634	3	404.540022	1210.59824	-0.7612	-0.00030793	-1.6856	-0.00068188	-2.4468	-0.00098982	404.5394133282023	15.947	0.2178	15.947	15.838	16.056	0					12	6	3	0	0	0	0.78738	1	6628	6628		16.275	5.475	1	1303800	+		20332	11139	9893	9932	23440	23440					0.0013620915508454345
LQDVAFEYAR	10	Unmodified	_LQDVAFEYAR_					0	0	0			REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	404.540022	1210.59824	0.49336	0.00019958	-2.2575	-0.00091324	-1.7641	-0.00071365	404.53901372653615	15.88	0.15399	16.01	15.933	16.086	0.13022	-0.02296	-0.00011121	NaN	16.275	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	225640	+		20333	11139	9893	9932							0.0013620915508454345
LQDVAFEYAR	10	Unmodified	_LQDVAFEYAR_					0	0	0			REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	REV__nc|ENSG00000174989|Q8N3Y1-2|FBXW8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	404.540022	1210.59824	-0.18133	-7.3357E-05	-3.359	-0.0013589	-3.5404	-0.0014322	404.5384456036787	15.316	0.12315	16.143	16.076	16.2	0.82643	0.10961	-0.0014481	NaN	16.275	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	258350	+		20334	11139	9893	9932							0.0013620915508454345
LQEECSPHL	9	Unmodified	_LQEECSPHL_					0	0	0		ENSG00000267508|ENST00000614994|ZNF285	ENSG00000267508|ENST00000614994|ZNF285	ENSG00000267508|ENST00000614994|ZNF285	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.3269531130791	2	528.244949	1054.47534	3.5098	0.001854	-1.5288	-0.0008076	1.981	0.0010464	528.2446606527732	73.645	0.34615	74.963	74.748	75.094	1.318					13	10	2	0	0	0	0.11463	1	30849	30849		12.532	8.2023	1	466060			20335	5438	9894	9933	23441	23441					-0.049713705678414044
LQEEEQQLQEE	11	Unmodified	_LQEEEQQLQEE_					0	0	0			REV__ENSG00000159450|ENST00000614923|TCHH	REV__ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.5498535037041	3	468.215933	1401.62597	1.4786	0.00069229	-1.7287	-0.00080939	-0.2501	-0.0001171	468.21533553839595	25.463	0.308	25.463	25.287	25.595	0					24	9	4	0	0	0	0.95935	1	10607	10607		6.2344	1.5184	1	1262500	+		20336	10574	9895	9934	23442	23442					-0.05877977165982884
LQEKRNTL	8	Unmodified	_LQEKRNTL_					0	0	0		HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant;nc|ENSG00000008869|Q9P2D3-3|HEATR5B;ENSG00000008869|ENST00000233099|HEATR5B	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	HEATR5B|p.D1686Efs*2|1|0.12|ENSG00000008869|chr2:37002565-37002566|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2967712283134	2	501.290548	1000.56654	1.4965	0.00075016	4.0532	0.0020318	5.5496	0.002782	501.2921048707891	65.905	0.24127	67.813	67.586	67.828	1.9085					13	7	2	0	0	0	0.87276	1	27606	27606		13.508	0.97634	1	1776000			20337	535	9896	9935	23443	23443					0.06628261191792717
LQFGEGAGLDW	11	Unmodified	_LQFGEGAGLDW_					0	0	0			REV__ENST00000505903.1_1_17:47072677-47072911:-|nuORF	REV__ENST00000505903.1_1_17:47072677-47072911:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7864257693291	2	596.785296	1191.55604	3.3591	0.0020046	0.39729	0.0002371	3.7564	0.0022417	596.7853598400171	74.443	0.29566	75.761	75.621	75.917	1.318					16	9	2	0	0	0	0.54522	1	31235	31235		22.736	2.2827	1	2205800	+		20338	13535	9897	9936	23444	23444					-0.03207766253308364
LQFLRPVL	8	Unmodified	_LQFLRPVL_					0	0	0			REV__nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	REV__nc|ENSG00000204961|Q9Y5H5-2|PCDHA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3154479861259	2	493.313295	984.612037	3.0547	0.0015069	0.18037	8.8981E-05	3.2351	0.0015959	493.31332406647033	70.6	0.44743	71.953	71.744	72.191	1.3536					40	13	4	0	0	0	0.77833	1	29689	29689		23.148	1.4018	1	9424900	+		20339	11807	9898	9937	23445	23445					0.11911531444843604
LQFYFFCTF	9	Unmodified	_LQFYFFCTF_					0	0	0		OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant;OR5I1|p.E209Rfs*65|1|0.17|ENSG00000167825|chr11:55935776-55935777|-/T|frameshift_variant;ENSG00000167825|ENST00000301532|OR5I1	OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant	OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.2812988162041	2	608.280803	1214.54705	1.8517	0.0011263	-0.20436	-0.00012431	1.6473	0.001002	608.2794151810809	42.227	0.50724	43.567	43.32	43.827	1.3399					38	15	4	0	0	0	0.59203	1	17683	17683		11.64	0.14559	1	1765700			20340	3996	9899	9938	23446	23446					-0.051638311433180206
LQFYFFCTF	9	Unmodified	_LQFYFFCTF_					0	0	0		OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant;OR5I1|p.E209Rfs*65|1|0.17|ENSG00000167825|chr11:55935776-55935777|-/T|frameshift_variant;ENSG00000167825|ENST00000301532|OR5I1	OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant	OR5I1|p.E209Cfs*23|1|0.17|ENSG00000167825|chr11:55935777-55935778|-/AATCACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.2805053591728	2	608.280803	1214.54705	1.7792	0.0010822	-0.78551	-0.00047781	0.99367	0.00060443	608.2796700526875	41.712	0.44562	43.605	43.413	43.859	1.8927					29	13	3	0	0	0	0.59203	1	17457	17457		11.64	1.5664	1	1651800			20341	3996	9899	9938	23447	23447					-0.051638311433180206
LQGQAKRLRQR	11	Unmodified	_LQGQAKRLRQR_					0	0	0			REV__nc|ENSG00000176531|Q6NSJ2-2|PHLDB3	REV__nc|ENSG00000176531|Q6NSJ2-2|PHLDB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2087280154228	4	339.210101	1352.8113	-1.5694	-0.00053234	-2.3898	-0.00081065	-3.9592	-0.001343	339.2089405362541	41.468	1.43	41.468	40.612	42.042	0					110	44	3	0	0	0	1.0357	1	17474	17474		1.4551	0.34536	1	2816400	+		20342	11183	9900	9939	23448	23448					0.14900559725447238
LQGQHLIQL	9	Unmodified	_LQGQHLIQL_					0	0	0			REV__ENST00000470150.5_1_3:184098136-184100834:+|nuORF	REV__ENST00000470150.5_1_3:184098136-184100834:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.7853881716728	2	525.308741	1048.60293	1.8567	0.00097533	-3.0326	-0.0015931	-1.1759	-0.00061773	525.3062805354257	83.563	0.43965	84.751	84.483	84.923	1.1879					24	13	3	0	0	0	0.073431	1	35012	35012		15.847	0	1	5524200	+		20343	8891	9901	9940	23449	23449					0.08057138088520333
LQGSGALKK	9	Unmodified	_LQGSGALKK_					0	0	0		CLASRP|p.E633Gfs*56|1|0.11|ENSG00000104859|chr19:45070045-45070045|A/-|frameshift_variant	CLASRP|p.E633Gfs*56|1|0.11|ENSG00000104859|chr19:45070045-45070045|A/-|frameshift_variant	CLASRP|p.E633Gfs*56|1|0.11|ENSG00000104859|chr19:45070045-45070045|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1876708865166	3	301.187032	900.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.964	1	14.792	14.292	15.292	0.82789								0	0	0	0.42693	1	5791	5791		2.2828	0.63015	1				20344	309	9902	9941	23450	23450					0.08501777651417797
LQHGYLVAWL	10	Unmodified	_LQHGYLVAWL_					0	0	0		nc|ENSG00000132259|Q8IV77-2|CNGA4;ENSG00000132259|ENST00000379936|CNGA4	nc|ENSG00000132259|Q8IV77-2|CNGA4	nc|ENSG00000132259|Q8IV77-2|CNGA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3362914919853	2	600.332216	1198.64988	2.1554	0.0012939	2.0322	0.00122	4.1875	0.0025139	600.333331015142	77.37	1.157	77.37	76.592	77.749	0					38	36	2	0	0	0	0.89646	1	31983	31983		1.8442	0	1	535050			20345	2520	9903	9942	23451	23451					0.05849997639666071
LQHGYLVAWL	10	Unmodified	_LQHGYLVAWL_					0	0	0		nc|ENSG00000132259|Q8IV77-2|CNGA4;ENSG00000132259|ENST00000379936|CNGA4	nc|ENSG00000132259|Q8IV77-2|CNGA4	nc|ENSG00000132259|Q8IV77-2|CNGA4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	600.332216	1198.64988	1.9645	0.0011794	2.8017	0.0016819	4.7662	0.0028613	600.333420040217	77.108	0.66055	77.424	77.04	77.701	0.31653	0.027295	0.00052454	NaN	1.8442	31	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449790			20346	2520	9903	9942							0.05849997639666071
LQHWGCLPPP	10	Unmodified	_LQHWGCLPPP_					0	0	0			REV__ENST00000278559.7_1_11:76796081-76823747:+|nuORF	REV__ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.2902099490166	2	574.289494	1146.56443	2.6371	0.0015145	-1.8651	-0.0010711	0.772	0.00044335	574.288549388898	101.17	0.14507	101.24	101.15	101.3	0.067017					8	4	2	0	0	0	0.89803	1	42370	42370		1.6526	0.17072	1	6039500	+		20347	12249	9904	9943	23452	23452					-0.002984908176586032
LQIGVIRVY	9	Unmodified	_LQIGVIRVY_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8318359255791	2	530.829309	1059.64407	2.9966	0.0015907	1.881	0.00099851	4.8777	0.0025892	530.8300780403233	62.982	0.37001	64.395	64.226	64.596	1.4134					23	11	3	0	0	0	0.0092758	1	26421	26421		108	54.421	1	3531300			20348	1310	9905	9944	23453	23453					0.11662899127986748
LQIGVIRVY	9	Unmodified	_LQIGVIRVY_					0	0	0		nc|ENSG00000100918|O95072-2|REC8;ENSG00000100918|ENST00000611366|REC8	nc|ENSG00000100918|O95072-2|REC8	nc|ENSG00000100918|O95072-2|REC8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8313476443291	2	530.829309	1059.64407	3.1864	0.0016914	2.0833	0.0011059	5.2697	0.0027973	530.829878375608	62.446	0.33692	64.403	64.208	64.545	1.9571					23	10	3	0	0	0	0.049839	1	26186	26186		68.081	13.307	1	3487800			20349	1310	9905	9944	23454	23454					0.11662899127986748
LQIQRNVTL	9	Unmodified	_LQIQRNVTL_					0	0	0		ENSG00000186480|ENST00000340368|INSIG1;nc|ENSG00000186480|O15503-2|INSIG1;ENSG00000125629|ENST00000245787|INSIG2	ENSG00000186480|ENST00000340368|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8304931521416	2	542.827298	1083.64004	2.8786	0.0015626	3.11	0.0016882	5.9886	0.0032508	542.8297112810811	62.567	1.4444	63.98	63.52	64.965	1.4134					113	46	3	0	0	0	0.20671	2	26173	26173;26230		32.305	3.2239	1	2584100			20350	4794	9906	9945	23455;23456	23455					0.10156809634281672
LQIQRNVTL	9	Unmodified	_LQIQRNVTL_					0	0	0		ENSG00000186480|ENST00000340368|INSIG1;nc|ENSG00000186480|O15503-2|INSIG1;ENSG00000125629|ENST00000245787|INSIG2	ENSG00000186480|ENST00000340368|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8283569216728	2	542.827298	1083.64004	2.922	0.0015861	3.3042	0.0017936	6.2262	0.0033798	542.8295430168296	62.036	1.3291	63.993	63.497	64.826	1.9571					94	42	3	0	0	0	0.15635	3	26006	26006;26152;26204		37.974	15.238	1	2366800			20351	4794	9906	9945	23457;23458;23459	23457					0.10156809634281672
LQIQSNEQSF	10	Unmodified	_LQIQSNEQSF_					0	0	0		MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant;nc|ENSG00000005810|O75592-2|MYCBP2;ENSG00000005810|ENST00000544440|MYCBP2	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3008300662041	2	597.293485	1192.57242	3.1822	0.0019007	3.3439	0.0019973	6.526	0.003898	597.295519816167	62.28	0.54612	64.237	63.999	64.545	1.9571					52	17	4	0	0	0	0.47063	1	26080	26080		29.082	1.4528	1	33699000			20352	493	9907	9946	23460	23460					-0.016166850871968563
LQKERLKKKYL	11	Unmodified	_LQKERLKKKYL_					0	0	0		nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	4	362.484331	1445.90822	-0.85618	-0.00031035	-0.46268	-0.00016771	-1.3189	-0.00047807	362.4834429262516	41.965	0.57018	41.965	41.563	42.133	0					27	17	2	0	0	0	0.14606	1	17436	17436		0.094841	0.011491	1	748450			20353	7861	9908	9947	23461	23461					0.2031010916186915
LQKERLKKKYL	11	Unmodified	_LQKERLKKKYL_					0	0	0		nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2538940310478	4	362.484331	1445.90822	1.5408	0.00055853	-2.2217	-0.00080533	-0.68086	-0.0002468	362.4829771072171	43.465	1.047	43.788	43.29	44.337	0.32388					81	32	3	0	0	0	0.14606	1	18434	18434		0.094841	0.011491	1	2093900			20354	7861	9908	9947	23462	23462					0.2031010916186915
LQKERLKKKYL	11	Unmodified	_LQKERLKKKYL_					0	0	0		nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2530090212822	4	362.484331	1445.90822	0.88482	0.00032073	-3.0576	-0.0011083	-2.1728	-0.00078759	362.7339389525999	46.888	0.66629	48.27	47.964	48.63	1.3825					48	20	3	0	0	0	0.14606	1	19586	19586		0.094841	0.011491	1	1990500			20355	7861	9908	9947	23463	23463					0.2031010916186915
LQKERLKKKYL	11	Unmodified	_LQKERLKKKYL_					0	0	0		nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2536804080009	4	362.484331	1445.90822	0.85929	0.00031148	-3.1564	-0.0011441	-2.2971	-0.00083266	362.48282572269	41.846	1.3474	43.172	42.746	44.094	1.3254					65	42	2	0	0	0	0.14606	1	17859	17859		0.094841	0.011491	1	2650400			20356	7861	9908	9947	23464	23464					0.2031010916186915
LQKERLKKKYL	11	Unmodified	_LQKERLKKKYL_					0	0	0		nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	nc|ENSG00000122008|Q9UBT6-4|POLK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2533752322197	4	362.484331	1445.90822	0.85812	0.00031106	-2.3026	-0.00083466	-1.4445	-0.00052361	362.73424986254344	38.608	0.60567	40.445	40.178	40.784	1.8366					32	18	3	0	0	0	0.14606	1	16325	16325		0.094841	0.011491	1	810540			20357	7861	9908	9947	23465	23465					0.2031010916186915
LQKIHIDVL	9	Unmodified	_LQKIHIDVL_					0	0	0		nc|ENSG00000156671|Q96LT4-2|SAMD8;ENSG00000156671|ENST00000542569|SAMD8	nc|ENSG00000156671|Q96LT4-2|SAMD8	nc|ENSG00000156671|Q96LT4-2|SAMD8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8338500857353	2	539.834591	1077.65463	1.7724	0.0009568	-2.1582	-0.001165	-0.38577	-0.00020825	539.8332885793919	78.457	0.53171	78.766	78.516	79.047	0.30933					39	16	3	0	0	0	0.77526	1	32802	32802		4.3292	0	1	1369800			20358	3454	9909	9948	23466	23466					0.11890881782414908
LQKLWVGRL	9	Unmodified	_LQKLWVGRL_					0	0	0		nc|ENSG00000144320|Q9C0E8-2|LNPK;ENSG00000144320|ENST00000272748|LNPK;nc|ENSG00000144320|Q9C0E8-4|LNPK	nc|ENSG00000144320|Q9C0E8-2|LNPK	nc|ENSG00000144320|Q9C0E8-2|LNPK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1014282107353	3	371.569476	1111.6866	2.4402	0.00090672	-0.29262	-0.00010873	2.1476	0.00079799	371.5690479011278	76.188	0.40848	77.956	77.751	78.159	1.7672					35	12	3	0	0	0	0.11954	1	31992	31992		0.26902	0	1	1065600			20359	3068	9910	9949	23467	23467					0.1352229425619953
LQKQQISML	9	Unmodified	_LQKQQISML_					0	0	0			REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	REV__ENST00000531443.5_1_8:107696561-107715155:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	544.7755004763603	2	544.810259	1087.60597	2.5847	0.0014082	3.946	0.0021498	6.5307	0.003558	545.3137290232991	75.302	0.52016	76.609	76.247	76.768	1.3063					29	16	3	0	0	0	0.082204	1	31487	31487		46.021	25.567	1	516910	+		20360	13711	9911	9950	23468	23468					0.06566645150996919
LQKRRKSKIKL	11	Unmodified	_LQKRRKSKIKL_					0	0	0		ST7|p.I487Hfs*?|1|0.05|ENSG00000004866|chr7:117229814-117229815|-/T|frameshift_variant	ST7|p.I487Hfs*?|1|0.05|ENSG00000004866|chr7:117229814-117229815|-/T|frameshift_variant	ST7|p.I487Hfs*?|1|0.05|ENSG00000004866|chr7:117229814-117229815|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	699.3815185427666	2	699.474995	1396.93544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.815	1	100.04	99.541	100.54	0.22545								0	0	0	0.63775	1	41982	41982		0.30703	0	1				20361	16006	9912	9951	23469	23469					0.25284637492927686
LQKTVMIPP	9	Unmodified	_LQKTVMIPP_					0	0	0			REV__MYBPC1|p.S366Vfs*2|1|0.21|ENSG00000196091|chr12:101648123-101648124|-/C|frameshift_variant	REV__MYBPC1|p.S366Vfs*2|1|0.21|ENSG00000196091|chr12:101648123-101648124|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.8065673708916	2	513.804445	1025.59434	2.8839	0.0014818	1.192	0.00061244	4.0759	0.0020942	513.8055285901955	80.494	0.66614	81.745	81.513	82.179	1.2512					43	21	3	0	0	0	0.70108	1	33792	33792		7.2892	2.5332	1	6518000	+		20362	11615	9913	9952	23470	23470					0.08256448127667682
LQLALNQQA	9	Unmodified	_LQLALNQQA_					0	0	0			REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF	REV__ENST00000565932.5_1_16:28734455-28746831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.2737609744072	2	499.785099	997.555644	2.9615	0.0014801	0.48496	0.00024238	3.4465	0.0017225	499.7856897837856	82.451	0.43744	84.121	83.799	84.236	1.67					22	13	2	0	0	0	0.10339	1	34610	34610		20.454	4.6064	1	1983000	+		20363	11411	9914	9953	23471	23471					0.056768588175032164
LQLHRLRFL	9	Unmodified	_LQLHRLRFL_					0	0	0			REV__ENSG00000142327|ENST00000270357|RNPEPL1	REV__ENSG00000142327|ENST00000270357|RNPEPL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2535583376884	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.83	1	104.99	104.49	105.49	0.15859								0	0	0	0.42693	1	44515	44515		1.1933	0	1		+		20364	10176	9915	9954	23472	23472					0.14536787896122405
LQLIRKVPTLL	11	Unmodified	_LQLIRKVPTLL_					0	0	0			REV__nc|ENSG00000134240|P54868-3|HMGCS2	REV__nc|ENSG00000134240|P54868-3|HMGCS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1293.868090808392	1	1293.86167	1292.85439	2.1011	0.0027185	-0.064587	-8.3567E-05	2.0365	0.002635	1293.862627681218	107.98	0.079124	108.14	108.09	108.17	0.15796					18	10	2	0	0	0	1.0395	1	46523	46523		0.30703	0	1	43954000	+		20365	9897	9916	9955	23473	23473					0.21967936730175097
LQLKACFV	8	Unmodified	_LQLKACFV_					0	0	0		ENSG00000153339|ENST00000283351|TRAPPC8;nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	461.2647582888603	2	461.264956	920.515359	2.0467	0.00094406	0.10407	4.8004E-05	2.1507	0.00099206	461.2639614826444	76.313	0.64458	76.313	76.011	76.656	0					48	20	3	0	0	0	0.88587	1	31779	31779		5.2307	0.47466	1	12482000			20366	3355	9917	9956	23474	23474					0.051922208933888214
LQLKACFV	8	Unmodified	_LQLKACFV_					0	0	0		ENSG00000153339|ENST00000283351|TRAPPC8;nc|ENSG00000153339|Q9Y2L5-2|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	461.2652160525322	2	461.264956	920.515359	2.9408	0.0013565	-0.74871	-0.00034535	2.1921	0.0010111	461.26383609540466	76.177	0.64537	76.499	76.112	76.758	0.32163					47	20	3	0	0	0	0.89051	1	31864	31864		2.3027	0	1	20461000			20367	3355	9917	9956	23475	23475					0.051922208933888214
LQLLRTEL	8	Unmodified	_LQLLRTEL_					0	0	0			REV__nc|ENSG00000127914|Q99996-5|AKAP9	REV__nc|ENSG00000127914|Q99996-5|AKAP9	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3067199587822	2	493.305667	984.596781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.914	1	41.777	41.277	42.277	1.8624								0	0	0	1.0178	1	16736	16736		12.532	0	1		+		20368	9722	9918	9957	23476	23476					0.10386619856978996
LQLLSLEIENE	11	Unmodified	_LQLLSLEIENE_					0	0	0			REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	REV__nc|ENSG00000103494|Q68CZ1-2|RPGRIP1L	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2393676638603	3	434.238009	1299.6922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.631	1	96.736	96.236	97.236	0.105								0	0	0	0.63775	1	40436	40436		1.1098	0	1		+		20369	9108	9919	9958	23477	23477					0.054338834666850744
LQLLVMIHQL	10	Unmodified	_LQLLVMIHQL_					0	0	0		ENSG00000143842|ENST00000367204|SOX13;ENST00000272193.10_1_1:204085443-204095259:+|nuORF;ENST00000367203.8_1_1:204082043-204086879:+|nuORF	ENSG00000143842|ENST00000367204|SOX13	ENSG00000143842|ENST00000367204|SOX13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3681518435478	2	604.365201	1206.71585	4.1403	0.0025023	-0.21449	-0.00012963	3.9258	0.0023726	604.3649108052708	91.725	0.49023	92.662	92.34	92.83	0.93623					41	15	4	0	0	0	0.89803	1	38566	38566		1.4819	0.8804	1	13776000			20370	3054	9920	9959	23478	23478					0.12076070490184065
LQLLVMIHQL	10	Unmodified	_LQLLVMIHQL_					0	0	0		ENSG00000143842|ENST00000367204|SOX13;ENST00000272193.10_1_1:204085443-204095259:+|nuORF;ENST00000367203.8_1_1:204082043-204086879:+|nuORF	ENSG00000143842|ENST00000367204|SOX13	ENSG00000143842|ENST00000367204|SOX13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3673583865166	2	604.365201	1206.71585	3.394	0.0020512	0.7072	0.00042741	4.1012	0.0024786	604.3654736552463	91.275	0.46095	92.641	92.438	92.899	1.366					39	14	3	0	0	0	0.89803	1	38405	38405		1.4819	0	1	11512000			20371	3054	9920	9959	23479	23479					0.12076070490184065
LQMFFFMVFS	10	Unmodified	_LQMFFFMVFS_					0	0	0		ENSG00000165762|ENST00000641885|OR4K2	ENSG00000165762|ENST00000641885|OR4K2	ENSG00000165762|ENST00000641885|OR4K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.8129150271416	2	648.811413	1295.60827	3.6012	0.0023365	0.92865	0.00060252	4.5298	0.002939	648.8118626690773	82.229	1.188	83.9	83.17	84.358	1.67					62	37	2	0	0	0	0.82019	1	34456	34456		10.074	0	1	1029700			20372	3857	9921	9960	23480	23480					-0.02770642435530135
LQMLQKQL	8	Unmodified	_LQMLQKQL_					0	0	0		ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP	ENSG00000178104|ENST00000695795|PDE4DIP	ENSG00000178104|ENST00000695795|PDE4DIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2918578982353	2	501.294245	1000.57394	1.9208	0.0009629	-2.3185	-0.0011623	-0.39771	-0.00019937	501.2918449522904	80.763	0.58331	82.459	82.12	82.703	1.6959					30	18	3	0	0	0	0.87935	1	33912	33912		9.3474	0	1	863730			20373	4473	9922	9961	23481	23481					0.07367277467858457
LQMRRIHRR	9	Unmodified	_LQMRRIHRR_					0	0	0			REV__ENSG00000121377|ENST00000240687|TAS2R7	REV__ENSG00000121377|ENST00000240687|TAS2R7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5886413455009	3	422.587647	1264.74111	2.957	0.0012496	0.9608	0.00040602	3.9178	0.0016556	422.5879004255103	92.409	0.90948	92.577	92.281	93.19	0.16835					45	28	2	0	0	0	0.8462	1	38799	38799		1.0715	0.29493	1	975260	+		20374	9586	9923	9962	23482	23482					0.1193298285597848
LQNKLLNIL	9	Unmodified	_LQNKLLNIL_					0	0	0		tr|A0A7D6VQF0|A0A7D6VQF0_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20585PE=4SV=1	tr|A0A7D6VQF0|A0A7D6VQF0_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20585PE=4SV=1	tr|A0A7D6VQF0|A0A7D6VQF0_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20585PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	534.2795287966728	2	534.842416	1067.67028	3.4294	0.0018342	-2.4548	-0.0013129	0.97467	0.00052129	534.8407711757267	74.379	0.41758	75.697	75.5	75.917	1.318					23	13	2	0	0	0	0.11518	1	31191	31191		3.9444	2.1002	1	1261000			20375	16794	9924	9963	23483	23483					0.1391516829946795
LQNRRLFQSLH	11	Unmodified	_LQNRRLFQSLH_					0	0	0		ENST00000576696.2_1_13:24041102-24041303:+|nuORF;ENST00000575689.4_1_13:24041048-24044692:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	706.3998290896416	2	706.399484	1410.78442	1.8681	0.0013196	-0.25412	-0.00017951	1.614	0.0011401	706.3991177137384	39.882	0.30746	41.192	41.023	41.33	1.3102					16	9	2	0	0	0	0.80586	1	16737	16737		15.248	3.0078	1	1786000			20376	7412	9925	9964	23484	23484					0.09545451114263415
LQNRRLFQSLH	11	Unmodified	_LQNRRLFQSLH_					0	0	0		ENST00000576696.2_1_13:24041102-24041303:+|nuORF;ENST00000575689.4_1_13:24041048-24044692:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	ENST00000576696.2_1_13:24041102-24041303:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	706.399484	1410.78442	0.93719	0.00066203	0.37737	0.00026657	1.3146	0.0009286	706.3998259812381	39.509	0.33981	41.371	41.123	41.463	1.8624	0.089686	0.00049185	NaN	15.248	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	959800			20377	7412	9925	9964							0.09545451114263415
LQPERYELW	9	Unmodified	_LQPERYELW_					0	0	0		nc|ENSG00000127663|O94953-2|KDM4B;ENST00000589104.5_1_19:5070919-5151519:+|nuORF;nc|ENSG00000127663|O94953|KDM4B;ENSG00000127663|ENST00000159111|KDM4B	nc|ENSG00000127663|O94953-2|KDM4B	nc|ENSG00000127663|O94953-2|KDM4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3157836794853	2	617.316763	1232.61897	1.1038	0.00068141	-1.0179	-0.00062834	0.08597	5.3071E-05	617.3155660095425	48.829	0.30814	50.217	50.018	50.326	1.388					17	9	2	0	0	0	0.44512	1	20427	20427		18.146	3.3081	1	976490			20378	2343	9926	9965	23485	23485					0.011967995347504257
LQPERYELW	9	Unmodified	_LQPERYELW_					0	0	0		nc|ENSG00000127663|O94953-2|KDM4B;ENST00000589104.5_1_19:5070919-5151519:+|nuORF;nc|ENSG00000127663|O94953|KDM4B;ENSG00000127663|ENST00000159111|KDM4B	nc|ENSG00000127663|O94953-2|KDM4B	nc|ENSG00000127663|O94953-2|KDM4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3190795779228	2	617.316763	1232.61897	1.9316	0.0011924	-1.3911	-0.00085874	0.54055	0.00033369	617.3158827935596	48.269	0.30759	50.247	50.114	50.422	1.9772					16	9	2	0	0	0	0.51189	2	20257	20205;20257		14.838	0	1	847730			20379	2343	9926	9965	23486;23487	23487					0.011967995347504257
LQQHIICKVL	10	Unmodified	_LQQHIICKVL_					0	0	0			REV__tr|A0A553SGB5|A0A553SGB5_NIACIDNA-3-methyladenineglycosylaseIIOS=NialliacirculansOX=1397GN=CEQ21_10530PE=4SV=1	REV__tr|A0A553SGB5|A0A553SGB5_NIACIDNA-3-methyladenineglycosylaseIIOS=NialliacirculansOX=1397GN=CEQ21_10530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8572875857353	2	597.855001	1193.69545	2.8708	0.0017163	1.3595	0.00081276	4.2303	0.0025291	597.8559668340692	73.631	2.3111	75.427	74.402	76.713	1.7962					133	73	3	0	0	0	0.85124	1	31025	31025		6.7232	0	1	1933100	+		20380	14739	9927	9966	23488	23488					0.10634899830392897
LQQLFIQL	8	Unmodified	_LQQLFIQL_					0	0	0		ENSG00000176658|ENST00000318217|MYO1D;nc|ENSG00000136286|B0I1T2-3|MYO1G;MYO1G|p.N590Kfs*17|1|0.22|ENSG00000136286|chr7:44967617-44967618|-/C|frameshift_variant;nc|ENSG00000136286|B0I1T2-4|MYO1G;ENSG00000136286|ENST00000258787|MYO1G;ENST00000463516.5_1_7:45009010-45014805:-|nuORF;ENST00000480503.5_1_7:45008844-45011824:-|nuORF;ENST00000483585.5_1_7:45006053-45011824:-|nuORF	ENSG00000176658|ENST00000318217|MYO1D	ENSG00000176658|ENST00000318217|MYO1D	MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8076354861259	2	501.80276	1001.59097	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.077	1	78.387	77.887	78.887	0.30933								0	0	0	1.0178	1	32646	32646		13.508	0.97634	1				20381	4414	9928	9967	23489	23489					0.09023521345329755
LQQVKNPVPRV	11	Unmodified	_LQQVKNPVPRV_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.5928832888603	3	426.594461	1276.76155	0.94984	0.0004052	-2.9905	-0.0012757	-2.0407	-0.00087054	426.59317436499373	41.323	0.54444	41.323	40.923	41.467	0					42	16	3	0	0	0	1.0362	1	17283	17283		1.3296	0	1	1337500			20382	4433	9929	9968	23490	23490					0.13424431996782005
LQRHRHRHHRH	11	Unmodified	_LQRHRHRHHRH_					0	0	0		ENSG00000166546|ENST00000536005|BEAN1	ENSG00000166546|ENST00000536005|BEAN1	ENSG00000166546|ENST00000536005|BEAN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	785.2548095583916	2	785.433381	1568.85221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.99	1	102.18	101.68	102.68	0.19076								0	0	0	0.63775	1	42885	42885		1.3295	0	1				20383	3912	9930	9969	23491	23491					0.09053758608297358
LQRLLKRWRK	10	Unmodified	_LQRLLKRWRK_					0	0	0		ENST00000333396.11_1_3:97663457-97663505:-|nuORF	ENST00000333396.11_1_3:97663457-97663505:-|nuORF	ENST00000333396.11_1_3:97663457-97663505:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	349.2022582888603	4	349.980753	1395.89391	-0.92606	-0.0003241	-0.31292	-0.00010952	-1.239	-0.00043362	349.98043923443316	59.534	0.6899	59.534	58.877	59.567	0					32	21	2	0	0	0	0.1256	1	24629	24629		0.62683	0.21856	1	3099400			20384	5900	9931	9970	23492	23492					0.2117950152423873
LQRRRLQLRWR	11	Unmodified	_LQRRRLQLRWR_					0	0	0			REV__ENST00000359541.6_1_2:27566423-27579033:-|nuORF	REV__ENST00000359541.6_1_2:27566423-27579033:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.3160888552666	3	527.662203	1579.96478	3.5816	0.0018899	-3.1479	-0.001661	0.43363	0.00022881	527.660788090912	91.216	0.44095	92.582	92.186	92.627	1.366					16	13	2	0	0	0	0.14606	1	38349	38349		0.40827	0.31342	1	797970	+		20385	12586	9932	9971	23493	23493					0.1979959456175493
LQRRRLQLRWR	11	Unmodified	_LQRRRLQLRWR_					0	0	0			REV__ENST00000359541.6_1_2:27566423-27579033:-|nuORF	REV__ENST00000359541.6_1_2:27566423-27579033:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	527.662203	1579.96478	2.149	0.0011339	-2.5758	-0.0013592	-0.42682	-0.00022522	527.9949370734507	92.414	0.64074	92.414	92.103	92.744	0	-0.080045	0.00045374	NaN	0.40827	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	816610	+		20386	12586	9932	9971							0.1979959456175493
LQRRRRSH	8	Unmodified	_LQRRRRSH_					0	0	0			REV__chr20:2798884-2800401|233|12.55|0.13|6.58|-|0|None,CPXM1|1	REV__chr20:2798884-2800401|233|12.55|0.13|6.58|-|0|None,CPXM1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	554.7728149294853	2	554.831572	1107.64859	3.062	0.0016989	0.74774	0.00041487	3.8098	0.0021138	554.8330188530955	64.593	0.24452	66	65.865	66.109	1.4071					10	7	2	0	0	0	2.3239	1	27121	27121		7.9102	0	1	667320	+		20387	8305	9933	9972	23494	23494					0.09907221114121967
LQRVCPHWI	9	Unmodified	_LQRVCPHWI_					0	0	0		ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3144409060478	2	576.310761	1150.60697	0.7194	0.0004146	3.7825	0.0021799	4.5019	0.0025945	576.3132599819438	20.195	0.24587	20.195	20.073	20.319	0					13	7	2	0	0	0	0.77526	1	8412	8412		4.3292	0.38484	1	425500			20388	6623	9934	9973	23495	23495					0.03768904310572907
LQRVCPHWI	9	Unmodified	_LQRVCPHWI_					0	0	0		ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	576.310761	1150.60697	0.46073	0.00026552	4.2346	0.0024404	4.6953	0.002706	576.3143423812593	19.806	0.2386	19.999	19.9	20.139	0.19342	-0.07538	0.00019275	NaN	4.3292	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237320			20389	6623	9934	9973							0.03768904310572907
LQRVCPHWI	9	Unmodified	_LQRVCPHWI_					0	0	0		ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	ENST00000453157.1_1_2:217352866-217363370:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	576.310761	1150.60697	0.36082	0.00020794	4.8918	0.0028192	5.2527	0.0030272	576.3140763041297	18.581	0.14919	20.029	19.908	20.057	1.448	-0.045585	0.00095034	NaN	4.3292	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	138620			20390	6623	9934	9973							0.03768904310572907
LQSRWPGRAKD	11	Unmodified	_LQSRWPGRAKD_					0	0	0			REV__ENST00000296181.8_1_3:124482040-124482349:-|nuORF	REV__ENST00000296181.8_1_3:124482040-124482349:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3575927615166	2	657.357285	1312.70002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.412	1	17.238	16.738	17.738	0.82643								0	0	0	0.63773	1	6824	6824		8.7454	0	1		+		20391	12292	9935	9974	23496	23496					0.056175002974896415
LQYGSHGQH	9	Unmodified	_LQYGSHGQH_					0	0	0		nc|ENSG00000112137|Q9C0D0-2|PHACTR1;ENSG00000112137|ENST00000332995|PHACTR1	nc|ENSG00000112137|Q9C0D0-2|PHACTR1	nc|ENSG00000112137|Q9C0D0-2|PHACTR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.3019897341728	2	513.741222	1025.46789	2.48	0.0012741	-2.3538	-0.0012092	0.12626	6.4866E-05	513.7391268887685	68.307	0.40005	69.685	69.459	69.859	1.3778					34	12	4	0	0	0	0.11071	1	28590	28590		15.847	1.2655	1	1915900			20392	1767	9936	9975	23497	23497					-0.043823420532362434
LQYLKSTRT	9	Unmodified	_LQYLKSTRT_					0	0	0		ENST00000483415.5_1_22:29686379-29686574:+|nuORF	ENST00000483415.5_1_22:29686379-29686574:+|nuORF	ENST00000483415.5_1_22:29686379-29686574:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	555.8150512576103	2	555.319306	1108.62406	1.3128	0.00072902	0.75658	0.00042014	2.0694	0.0011492	555.3210390001265	83.879	0.2886	85.067	84.858	85.147	1.1879					11	8	2	0	0	0	0.097511	1	35206	35206		16.942	0	1	1515100			20393	6841	9937	9976	23498	23498					0.07409103397390027
LRALLLAHKKK	11	Unmodified	_LRALLLAHKKK_					0	0	0		nc|ENSG00000111602|Q9UNS1-2|TIMELESS;ENSG00000111602|ENST00000553532|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	nc|ENSG00000111602|Q9UNS1-2|TIMELESS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.4735900759697	4	323.473766	1289.86596	-2.7058	-0.00087525	-0.43037	-0.00013921	-3.1361	-0.0010145	323.47394991186593	27.306	0.60932	27.306	26.922	27.532	0					69	19	5	0	0	0	1.0402	1	11431	11431		0.094841	0	1	68842000			20394	1743	9938	9977	23499	23499					0.23262178544155176
LRARALWKRF	10	Unmodified	_LRARALWKRF_					0	0	0		ENST00000486280.1_1_11:206013-207021:-|nuORF	ENST00000486280.1_1_11:206013-207021:-|nuORF	ENST00000486280.1_1_11:206013-207021:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.6087219119072	3	439.606924	1315.79894	2.4503	0.0010772	4.0282	0.0017708	6.4785	0.002848	439.6085439867383	81.091	0.40455	81.382	81.121	81.525	0.29056					16	12	2	0	0	0	0.89803	1	33898	33898		0.69767	0.19171	1	831900			20395	6864	9939	9978	23500	23500					0.15367568053056857
LRARALWKRF	10	Unmodified	_LRARALWKRF_					0	0	0		ENST00000486280.1_1_11:206013-207021:-|nuORF	ENST00000486280.1_1_11:206013-207021:-|nuORF	ENST00000486280.1_1_11:206013-207021:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	439.606924	1315.79894	1.591	0.00069941	2.9362	0.0012908	4.5272	0.0019902	439.6079212381881	81.376	0.092041	81.376	81.319	81.411	0	-0.0029605	-0.001226	NaN	0.69767	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	658560			20396	6864	9939	9978							0.15367568053056857
LRARRRAPR	9	Unmodified	_LRARRRAPR_					0	0	0			REV__ENST00000368491.7_2_6:118972582-118972996:-|nuORF	REV__ENST00000368491.7_2_6:118972582-118972996:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1534911990166	3	384.583002	1150.72718	-0.57713	-0.00022195	0.1727	6.6418E-05	-0.40443	-0.00015554	384.58327837795133	32.994	1.135	32.994	32.411	33.546	0					50	37	2	0	0	0	0.11954	1	13807	13807		0.26902	0	1	1084800	+		20397	12639	9940	9979	23501	23501					0.15784073419217748
LRCRTVPVRPL	11	Unmodified	_LRCRTVPVRPL_					0	0	0			REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	REV__ENST00000481734.1_1_3:39174545-39175936:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2017394900322	4	328.202588	1308.78124	0.18251	5.9899E-05	-1.313	-0.00043093	-1.1305	-0.00037103	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	1.0254	1	15428	15428		2.2527	0.16672	1	36142000	+		20398	13363	9941	9980	23502	23502					0.13920484735899663
LRDRGHFL	8	Unmodified	_LRDRGHFL_					0	0	0		ENST00000222247.9_1_19:17970709-17970769:+|nuORF	ENST00000222247.9_1_19:17970709-17970769:+|nuORF	ENST00000222247.9_1_19:17970709-17970769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.2847167849541	2	507.2856	1012.55665	1.4439	0.00073246	-2.6134	-0.0013257	-1.1695	-0.00059327	507.2845344892485	100.95	0.12611	100.95	100.87	101	0					10	3	4	0	0	0	0.88663	1	42256	42256		4.756	0.42677	1	13664000			20399	5531	9942	9981	23503	23503					0.05087117977086564
LRDRLHRST	9	Unmodified	_LRDRLHRST_					0	0	0			REV__tr|A0A7D6VXS5|A0A7D6VXS5_9CLOTLargeribosomalsubunitassemblyfactorBipAOS=ClostridiumintestinaleOX=36845GN=typAPE=3SV=1	REV__tr|A0A7D6VXS5|A0A7D6VXS5_9CLOTLargeribosomalsubunitassemblyfactorBipAOS=ClostridiumintestinaleOX=36845GN=typAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	385.2219421267509	3	385.223139	1152.64759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.01	103.51	104.51	0								0	0	0	0.42693	1	43808	43808		0.96228	0	1		+		20400	15552	9943	9982	23504	23504					0.07736961954537946
LREALLSSR	9	Unmodified	_LREALLSSR_					0	0	0		ENSG00000178104|ENST00000695795|PDE4DIP;nc|ENSG00000178104|Q5VU43-3|PDE4DIP;nc|ENSG00000178104|Q5VU43|PDE4DIP;nc|ENSG00000178104|Q5VU43-4|PDE4DIP;ENST00000420737.1_1:146011237-146016889:+|nuORF;ENST00000479369.6_1_1:144864133-144875987:-|nuORF	ENSG00000178104|ENST00000695795|PDE4DIP	ENSG00000178104|ENST00000695795|PDE4DIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.8129760622978	2	522.811648	1043.60874	2.0667	0.0010805	-0.27772	-0.00014519	1.789	0.00093529	522.8119471898066	80.201	0.37592	80.201	79.978	80.354	0					18	11	2	0	0	0	0.71526	1	33396	33396		6.7232	1.9672	1	1917900			20401	4473	9944	9983	23505	23505					0.08868236600187629
LREKLGARRP	10	Unmodified	_LREKLGARRP_					0	0	0			REV__nc|ENSG00000266714|Q96JP2-2|MYO15B	REV__nc|ENSG00000266714|Q96JP2-2|MYO15B	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2504760622978	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.311	1	31.593	31.093	32.093	1.2825								0	0	0	0.66141	1	12720	12720		2.086	0.63089	1		+		20402	11997	9945	9984	23506	23506					0.14134698402403956
LREKLQQS	8	Unmodified	_LREKLQQS_					0	0	0		ENST00000398665.7_1_19:2225388-2225418:+|nuORF	ENST00000398665.7_1_19:2225388-2225418:+|nuORF	ENST00000398665.7_1_19:2225388-2225418:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2929260134697	2	501.290548	1000.56654	2.8082	0.0014077	-0.0032552	-1.6318E-06	2.8049	0.0014061	501.2903539027361	82.751	0.42683	83.021	82.817	83.244	0.27029					34	13	3	0	0	0	0.89124	1	34561	34561		1.8442	0	1	9663800			20403	6327	9946	9985	23507	23507					0.06628261191792717
LREPQRLIETV	11	Unmodified	_LREPQRLIETV_					0	0	0			REV__ENSG00000182261|ENST00000691676|NLRP10	REV__ENSG00000182261|ENST00000691676|NLRP10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9347106814384	3	451.933143	1352.7776	2.4766	0.0011192	-0.15122	-6.8342E-05	2.3253	0.0010509	451.933098551888	85.54	1.3865	85.54	84.716	86.103	0					111	43	3	0	0	0	1.0362	1	35471	35471		0.45452	0	1	3321100	+		20404	11345	9947	9986	23508	23508					0.11532093442997393
LREVMLRKKH	10	Unmodified	_LREVMLRKKH_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-5|LMO7	REV__nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2686340212822	3	437.267691	1308.78124	1.9315	0.00084459	-0.39327	-0.00017196	1.5383	0.00067263	437.26738171747036	37.068	0.47281	37.373	37.136	37.609	0.30497					32	21	2	0	0	0	0.89803	1	15635	15635		1.5923	0.26264	1	1783900	+		20405	9976	9948	9987	23509	23509					0.13920484735899663
LREVMLRKKH	10	Unmodified	_LREVMLRKKH_					0	0	0			REV__nc|ENSG00000136153|Q8WWI1-5|LMO7	REV__nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2689697146416	3	437.267691	1308.78124	2.038	0.00089113	0.73981	0.0003235	2.7778	0.0012146	437.26777768687555	39.19	0.81233	39.499	38.919	39.731	0.30857					68	26	3	0	0	0	0.89803	1	16477	16477		0.69767	0.07084	1	2674100	+		20406	9976	9948	9987	23510	23510					0.13920484735899663
LRFAAAAAA	9	Unmodified	_LRFAAAAAA_					0	0	0		nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	861.4960815310478	1	861.494113	860.486836	2.7913	0.0024047	-0.15345	-0.0001322	2.6378	0.0022725	861.4938619249767	107.85	0.17897	107.9	107.79	107.97	0.052452					28	9	4	0	0	0	0.85403	1	46214	46214		0	0	1	82544000			20407	7867	9949	9988	23511	23511					0.05101239308442018
LRFAAAAAA	9	Unmodified	_LRFAAAAAA_					0	0	0		nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	861.494113	860.486836	1.1933	0.001028	1.3	0.0011199	2.4933	0.002148	861.4953166538501	107.87	0.17604	107.87	107.75	107.93	0	-0.041158	0.0013456	NaN	0	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	63318000			20408	7867	9949	9988							0.05101239308442018
LRFAAAAAA	9	Unmodified	_LRFAAAAAA_					0	0	0		nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	nc|ENSG00000130283|P27539|GDF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	861.494113	860.486836	3.1046	0.0026746	-1.6731	-0.0014414	1.4315	0.0012332	861.4921304892132	107.75	0.14709	107.91	107.85	107.99	0.15795	-0.0039097	-0.0012157	NaN	0	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39619000			20409	7867	9949	9988							0.05101239308442018
LRFARLRRV	9	Unmodified	_LRFARLRRV_					0	0	0		ENSG00000177464|ENST00000323040|GPR4	ENSG00000177464|ENST00000323040|GPR4	ENSG00000177464|ENST00000323040|GPR4	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2605468630791	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.315	1	97.406	96.906	97.906	0.090881								0	0	0	0.42693	1	40720	40720		0.26902	0.033176	1				20410	4446	9950	9989	23512	23512					0.1716301236454001
LRFFYRQYLRE	11	Unmodified	_LRFFYRQYLRE_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	796.4297973513603	2	795.930617	1589.84668	1.7271	0.0013746	-3.1788	-0.0025301	-1.4517	-0.0011555	795.9294552306409	50.108	0.37544	50.438	50.201	50.576	0.33019					27	11	3	0	0	0	1.0249	1	21004	21004		2.2828	1.2113	1	791700	+		20411	11085	9951	9990	23513	23513					0.07535177462591491
LRFFYRQYLRE	11	Unmodified	_LRFFYRQYLRE_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	795.930617	1589.84668	2.0721	0.0016492	-3.6825	-0.002931	-1.6105	-0.0012818	796.4279188923081	50.469	0.2543	50.469	50.341	50.595	0	-0.022372	-0.0013537	NaN	2.2828	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590670	+		20412	11085	9951	9990							0.07535177462591491
LRFFYRQYLRE	11	Unmodified	_LRFFYRQYLRE_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	795.930617	1589.84668	1.7271	0.0013746	-3.1788	-0.0025301	-1.4517	-0.0011555	795.9294552306409	50.108	0.37544	50.438	50.201	50.576	0.33019	-0.053121	-0.00055188	NaN	2.2828	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	791700	+		20413	11085	9951	9990							0.07535177462591491
LRFFYRQYLRE	11	Unmodified	_LRFFYRQYLRE_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	795.930617	1589.84668	1.1945	0.00095072	-1.6191	-0.0012887	-0.42464	-0.00033799	796.4301437623544	49.108	0.28284	50.496	50.326	50.609	1.388	0.0048101	0.001931	NaN	2.2828	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	653400	+		20414	11085	9951	9990							0.07535177462591491
LRFFYRQYLRE	11	Unmodified	_LRFFYRQYLRE_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	795.930617	1589.84668	1.6471	0.001311	-3.5842	-0.0028528	-1.9371	-0.0015418	796.429259389965	48.584	0.31005	50.562	50.39	50.7	1.9772	0.070682	-0.0011973	NaN	2.2828	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807050	+		20415	11085	9951	9990							0.07535177462591491
LRFHRCPCRD	10	Unmodified	_LRFHRCPCRD_					0	0	0		ENST00000380770.3_1_19:10397831-10398857:+|nuORF;nc|ENSG00000105371|Q14773-3|ICAM4	ENST00000380770.3_1_19:10397831-10398857:+|nuORF	ENST00000380770.3_1_19:10397831-10398857:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8814575076103	3	434.881731	1301.62336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.19	1	111.34	110.84	111.84	0.15038								0	0	0	0.66254	1	48194	48194		0.15932	0.01943	1				20416	6228	9952	9991	23514	23514					-0.015383377949774513
LRFPPLAAQ	9	Unmodified	_LRFPPLAAQ_					0	0	0		ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1012.590686023235	1	1012.59383	1011.58655	2.2969	0.0023258	-0.057422	-5.8146E-05	2.2395	0.0022677	1012.5959582106407	72.603	0.37671	72.928	72.705	73.082	0.32494					27	11	4	0	0	0	0.33297	1	30334	30334		32.305	9.1571	1	4488000			20417	6413	9953	9992	23515	23515					0.08122056922411502
LRFPPLAAQ	9	Unmodified	_LRFPPLAAQ_					0	0	0		ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.588732898235	1	1012.59383	1011.58655	1.6685	0.0016896	3.6085	0.003654	5.2771	0.0053435	1012.5992833997105	71.445	0.48607	72.787	72.512	72.998	1.3415					25	15	2	0	0	0	0.42097	1	29924	29924		26.884	9.9414	1	4751900			20418	6413	9953	9992	23516	23516					0.08122056922411502
LRFPPLAAQ	9	Unmodified	_LRFPPLAAQ_					0	0	0		ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	ENST00000417381.5_1_22:28315512-28315788:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1012.59383	1011.58655	1.7553	0.0017774	-0.061771	-6.2549E-05	1.6935	0.0017149	1012.5954605625456	73.075	0.40842	73.075	72.872	73.28	0	0.14484	-0.0003793	NaN	32.305	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2719200			20419	6413	9953	9992							0.08122056922411502
LRFWLLFWLLL	11	Unmodified	_LRFWLLFWLLL_					0	0	0		ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.6460754275322	3	507.311114	1518.91151	2.6784	0.0013588	-1.1682	-0.00059265	1.5102	0.00076613	507.31058123141855	88.571	0.93191	88.571	88.119	89.051	0					61	29	3	0	0	0	1.0402	1	36906	36906		0.094841	0.094841	1	985370			20420	7173	9954	9993	23517	23517					0.17281404006553203
LRFWLLFWLLL	11	Unmodified	_LRFWLLFWLLL_					0	0	0		ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3116943240166	3	507.311114	1518.91151	2.9254	0.0014841	-1.2933	-0.00065613	1.632	0.00082795	507.3107247037459	90.653	1.2725	90.862	90.081	91.354	0.20904					90	39	3	0	0	0	1.0402	3	37928	37928;37975;38094		0.094841	0.094841	1	1379600			20421	7173	9954	9993	23518;23519;23520	23518					0.17281404006553203
LRFWPRWRRWP	11	Unmodified	_LRFWPRWRRWP_					0	0	0			REV__ENST00000532024.1_1_11:70118214-70118385:+|nuORF	REV__ENST00000532024.1_1_11:70118214-70118385:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	828.6625244021416	2	828.462753	1654.91095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.76	1	100.97	100.47	101.47	0.20527								0	0	0	0.63775	1	42371	42371		0	0	1		+		20422	13718	9955	9994	23521	23521					0.10969422130028761
LRGALALL	8	Unmodified	_LRGALALL_					0	0	0		THBS3|p.D80Efs*11|1|0.06|ENSG00000169231|chr1:155206246-155206246|G/-|frameshift_variant;ENST00000541990.5_1_1:155175040-155177685:-|nuORF;nc|ENSG00000169231|P49746-2|THBS3;ENSG00000169231|ENST00000368378|THBS3	THBS3|p.D80Efs*11|1|0.06|ENSG00000169231|chr1:155206246-155206246|G/-|frameshift_variant	THBS3|p.D80Efs*11|1|0.06|ENSG00000169231|chr1:155206246-155206246|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	826.5530273318291	1	826.550899	825.543623	2.9841	0.0024665	-0.57997	-0.00047938	2.4041	0.0019871	826.5502575793515	107.04	0.18884	107.21	107.08	107.27	0.16174					18	8	3	0	0	0	0.89176	1	45907	45907		0.79363	0	1	52952000			20423	4076	9956	9995	23522	23522					0.12387286864975522
LRHWLVHQ	8	Unmodified	_LRHWLVHQ_					0	0	0			REV__ENST00000451055.6_1_3:122632522-122634295:-|nuORF	REV__ENST00000451055.6_1_3:122632522-122634295:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3093749880791	2	544.809242	1087.60393	1.2855	0.00070035	4.207	0.002292	5.4925	0.0029924	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.83518	1	29515	29515		18.135	2.2878	1	6733700	+		20424	13133	9957	9996	23523	23523					0.06363397248082947
LRIGKGRPLSI	11	Unmodified	_LRIGKGRPLSI_					0	0	0			REV__ENST00000480755.1_1_19:9793972-9794221:-|nuORF	REV__ENST00000480755.1_1_19:9793972-9794221:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1991454958916	4	303.200208	1208.77173	-2.6672	-0.00080869	-0.37655	-0.00011417	-3.0437	-0.00092286	303.20008450280005	31.651	1.3899	31.651	30.928	32.318	0					148	44	4	0	0	0	1.0369	1	13356	13356		1.1098	0.41209	1	5737000	+		20425	9760	9958	9997	23524	23524					0.1756903972204782
LRIGKGRPLSI	11	Unmodified	_LRIGKGRPLSI_					0	0	0			REV__ENST00000480755.1_1_19:9793972-9794221:-|nuORF	REV__ENST00000480755.1_1_19:9793972-9794221:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1991454958916	4	303.200208	1208.77173	-2.5807	-0.00078246	-1.4565	-0.0004416	-4.0371	-0.0012241	303.1997851907609	33.758	1.2591	33.758	33.233	34.492	0					121	40	4	0	0	0	1.0191	1	14108	14108		2.6312	0.34846	1	7420400	+		20426	9760	9958	9997	23525	23525					0.1756903972204782
LRIHKLFFHV	10	Unmodified	_LRIHKLFFHV_					0	0	0			REV__ENST00000496418.5_1_3:132361537-132378459:-|nuORF	REV__ENST00000496418.5_1_3:132361537-132378459:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2694274783134	3	437.267909	1308.7819	1.2901	0.00056411	0.40767	0.00017826	1.6977	0.00074237	437.2675329460279	42.015	0.85207	42.015	41.627	42.479	0					60	26	3	0	0	0	0.89803	1	17522	17522		0.77653	0.14971	1	1120900	+		20427	13466	9959	9998	23526	23526					0.13985647447270821
LRIKVGLPLIL	11	Unmodified	_LRIKVGLPLIL_					0	0	0		tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2927734255791	3	412.291831	1233.85366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.55	1	100.55	100.05	101.05	0								0	0	0	0.63775	1	42092	42092		0	0	1				20428	16997	9960	9999	23527	23527					0.24609142081158097
LRIKVGLPLIL	11	Unmodified	_LRIKVGLPLIL_					0	0	0		tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2931701540947	3	412.291831	1233.85366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.97	1	100.97	100.47	101.47	0								0	0	0	0.63775	1	42272	42272		0	0	1				20429	16997	9960	9999	23528	23528					0.24609142081158097
LRIKVGLPLIL	11	Unmodified	_LRIKVGLPLIL_					0	0	0		tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	tr|A0A7D6VY63|A0A7D6VY63_9CLOTStageIIIsporulationproteinAAOS=ClostridiumintestinaleOX=36845GN=spoIIIAAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2932922244072	3	412.291831	1233.85366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.57	1	100.64	100.14	101.14	0.072716								0	0	0	0.63775	1	42104	42104		0	0	1				20430	16997	9960	9999	23529	23529					0.24609142081158097
LRILPGKGPVV	11	Unmodified	_LRILPGKGPVV_					0	0	0		ENST00000483968.5_1_3:138478141-138488943:-|nuORF	ENST00000483968.5_1_3:138478141-138488943:-|nuORF	ENST00000483968.5_1_3:138478141-138488943:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.8796874880791	2	574.879333	1147.74411	1.0811	0.0006215	0.77161	0.00044358	1.8527	0.0010651	574.8792733596218	106.04	0.27767	106.04	105.84	106.11	0					22	13	3	0	0	0	1.0362	1	45159	45159		1.3295	0.5359	1	167620000			20431	6847	9961	10000	23530	23530					0.17615136461790826
LRIQKEHRV	9	Unmodified	_LRIQKEHRV_					0	0	0		nc|ENSG00000206203|Q96PF2|TSSK2;ENSG00000212122|ENST00000390666|TSSK1B	nc|ENSG00000206203|Q96PF2|TSSK2	nc|ENSG00000206203|Q96PF2|TSSK2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	394.2239562869072	3	393.575401	1177.70437	2.6306	0.0010353	-0.57558	-0.00022654	2.055	0.0008088	393.57532846528676	87.719	0.77546	87.954	87.578	88.354	0.23471					36	24	2	0	0	0	0.11954	1	36625	36625		0.26902	0.26902	1	434290			20432	5205	9962	10001	23531	23531					0.12263009511070777
LRITLGLW	8	Unmodified	_LRITLGLW_					0	0	0		ENST00000258198.6_1_16:66757345-66757441:-|nuORF	ENST00000258198.6_1_16:66757345-66757441:-|nuORF	ENST00000258198.6_1_16:66757345-66757441:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3080627322197	2	486.30547	970.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.495	1	65.902	65.402	66.402	1.4071								0	0	0	0.5447	1	27050	27050		60.39	13.469	1				20433	5609	9963	10002	23532	23532					0.10991244927799926
LRIYFPGP	8	Unmodified	_LRIYFPGP_					0	0	0		ENST00000536017.1_1_11:64053906-64055433:+|nuORF	ENST00000536017.1_1_11:64053906-64055433:+|nuORF	ENST00000536017.1_1_11:64053906-64055433:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7786437869072	2	481.776545	961.538538	3.0907	0.001489	0.7233	0.00034847	3.814	0.0018375	481.7773317914562	103.41	0.086021	103.59	103.53	103.62	0.18066					7	3	3	0	0	0	0.89176	1	43548	43548		0.79363	0	1	17727000			20434	7202	9964	10003	23533	23533					0.056229830023767136
LRIYFPGP	8	Unmodified	_LRIYFPGP_					0	0	0		ENST00000536017.1_1_11:64053906-64055433:+|nuORF	ENST00000536017.1_1_11:64053906-64055433:+|nuORF	ENST00000536017.1_1_11:64053906-64055433:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	481.776545	961.538538	3.2505	0.001566	3.1523	0.0015187	6.4028	0.0030847	481.778051139294	103.45	0.10884	103.61	103.51	103.62	0.16445	0.012564	0.0011595	NaN	0.79363	7	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5071500			20435	7202	9964	10003							0.056229830023767136
LRKDHVRR	8	Unmodified	_LRKDHVRR_					0	0	0		nc|ENSG00000174233|O43306-2|ADCY6;ENSG00000174233|ENST00000357869|ADCY6;ENST00000552090.1_1_12:49167835-49170266:-|nuORF	nc|ENSG00000174233|O43306-2|ADCY6	nc|ENSG00000174233|O43306-2|ADCY6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3316528201103	2	540.330873	1078.64719	1.3314	0.00071939	-0.14908	-8.0553E-05	1.1823	0.00063884	540.3307178135227	69.951	1.3958	70.273	69.312	70.708	0.32224					115	44	3	0	0	0	0.89178	1	29308	29308		0.69038	0	1	4212400			20436	4324	9965	10004	23534	23534					0.11101587025336812
LRKFETRKLR	10	Unmodified	_LRKFETRKLR_					0	0	0			REV__ENSG00000178177|ENST00000635767|LCORL	REV__ENSG00000178177|ENST00000635767|LCORL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	674.4243041872978	2	673.922595	1345.83064	2.9023	0.0019559	-2.1209	-0.0014293	0.78142	0.00052662	674.4221312802495	107.28	0.18492	107.44	107.36	107.54	0.15781					31	9	4	0	0	0	0.89803	1	46113	46113		1.4819	0	1	116060000	+		20437	11239	9966	10005	23535	23535					0.17155516016350703
LRKIVAHA	8	Unmodified	_LRKIVAHA_					0	0	0		tr|A0A7D6VQG5|A0A7D6VQG5_9CLOTXanthinedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02095PE=4SV=1	tr|A0A7D6VQG5|A0A7D6VQG5_9CLOTXanthinedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02095PE=4SV=1	tr|A0A7D6VQG5|A0A7D6VQG5_9CLOTXanthinedehydrogenasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02095PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1991149783134	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.611	1	33.908	33.408	34.408	0.29701								0	0	0	1.0178	1	14113	14113		1.6526	0	1				20438	16796	9967	10006	23536	23536					0.11929493987838669
LRKKAKIFKRM	11	Unmodified	_LRKKAKIFKRM_					0	0	0			REV__ENSG00000154479|ENST00000447353|CFAP210	REV__ENSG00000154479|ENST00000447353|CFAP210	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0700561404228	4	355.483971	1417.90678	0.67247	0.00023905	-0.47042	-0.00016723	0.20206	7.1827E-05	355.7344193942343	27.469	0.52659	27.741	27.275	27.802	0.27119					38	16	3	0	0	0	0.14606	1	11302	11302		0	0	1	1190300	+		20439	10475	9968	10007	23537	23537					0.21454196592117114
LRKKAKIFKRM	11	Unmodified	_LRKKAKIFKRM_					0	0	0			REV__ENSG00000154479|ENST00000447353|CFAP210	REV__ENSG00000154479|ENST00000447353|CFAP210	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0699340701103	4	355.483971	1417.90678	0.23621	8.3969E-05	-0.075138	-2.671E-05	0.16107	5.7259E-05	355.7348711547591	25.998	0.70045	27.715	27.213	27.914	1.7167					28	22	2	0	0	0	0.14606	1	10804	10804		0	0	1	746800	+		20440	10475	9968	10007	23538	23538					0.21454196592117114
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	355.9155761599541	3	355.917099	1064.72947	-1.7529	-0.0006239	-3.2787	-0.001167	-5.0317	-0.0017909	355.91611236916407	24.629	0.48947	24.629	24.552	25.041	0					31	15	3	0	0	0	0.89187	1	10279	10279		0.40072	0.40072	1	4623500	+		20441	11446	9969	10008	23539	23539					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0700256228447	3	355.917099	1064.72947	-1.7267	-0.00061456	-2.6952	-0.00095927	-4.4219	-0.0015738	355.9163696942671	25.363	0.31017	25.363	25.223	25.534	0					13	9	2	0	0	0	2.3239	1	10618	10618		0	0	1	236700	+		20442	11446	9969	10008	23540	23540					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699340701103	3	355.917099	1064.72947	-1.7529	-0.0006239	-3.2787	-0.001167	-5.0317	-0.0017909	355.91611236916407	24.629	0.48947	24.629	24.552	25.041	0					31	15	3	0	0	0	2.3239	1	10357	10357		0	0	1	4623500	+		20443	11446	9969	10008	23541	23541					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0703307986259	3	355.917099	1064.72947	-1.7077	-0.0006078	-3.1907	-0.0011356	-4.8984	-0.0017434	355.91596151407697	25.795	0.49223	25.795	25.503	25.995	0					26	15	2	0	0	0	2.3239	1	10720	10720		0	0	1	671640	+		20444	11446	9969	10008	23542	23542					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0695983767509	3	355.917099	1064.72947	-1.6351	-0.00058197	-3.3559	-0.0011944	-4.9911	-0.0017764	355.91586811639627	27.377	0.24231	27.377	27.259	27.501	0					13	7	2	0	0	0	2.3239	1	11474	11474		0	0	1	902900	+		20445	11446	9969	10008	23543	23543					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0698425173759	3	355.917099	1064.72947	-1.8265	-0.00065007	-2.8397	-0.0010107	-4.6662	-0.0016608	355.9159153320218	23.085	0.27223	23.085	22.957	23.229	0					22	8	3	0	0	0	2.3239	1	9681	9681		0	0	1	1559900	+		20446	11446	9969	10008	23544	23544					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0697814822197	3	355.917099	1064.72947	-0.046446	-1.6531E-05	-2.893	-0.0010297	-2.9395	-0.0010462	355.9162659133046	22.874	0.33787	24.088	23.889	24.227	1.2145					19	10	2	0	0	0	2.3239	1	9590	9590		0	0	1	1378300	+		20447	11446	9969	10008	23545	23545					0.19969109104317795
LRKKKHKK	8	Unmodified	_LRKKKHKK_					0	0	0			REV__ENSG00000185088|ENST00000330964|RPS27L	REV__ENSG00000185088|ENST00000330964|RPS27L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0692626833916	3	355.917099	1064.72947	0.099784	3.5515E-05	-3.0284	-0.0010779	-2.9286	-0.0010423	355.9159940639297	22.441	0.41668	24.057	23.862	24.278	1.6158					23	13	2	0	0	0	2.3239	1	9460	9460		0	0	1	1636900	+		20448	11446	9969	10008	23546	23546					0.19969109104317795
LRKKPDLVILK	11	Unmodified	_LRKKPDLVILK_					0	0	0			REV__ENSG00000152495|ENST00000282356|CAMK4	REV__ENSG00000152495|ENST00000282356|CAMK4	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9462768435478	2	661.947747	1321.88094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.211	1	41.211	40.711	41.711	0								0	0	0	0.63775	1	17258	17258		2.9952	1.3426	1		+		20449	10422	9970	10009	23547	23547					0.23287625621469488
LRKKQRRLPR	10	Unmodified	_LRKKQRRLPR_					0	0	0		ENSG00000188993|ENST00000682860|LRRC66	ENSG00000188993|ENST00000682860|LRRC66	ENSG00000188993|ENST00000682860|LRRC66	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	339.2025939822197	4	338.478378	1349.8844	-2.3037	-0.00077976	-0.23375	-7.912E-05	-2.5375	-0.00085888	338.4779605813276	24.629	0.33602	24.629	24.398	24.734	0					17	10	2	0	0	0	0.12557	1	10177	10177		0.62683	0.48693	1	1551600			20450	4888	9971	10010	23548	23548					0.22345733238717003
LRKKQRRLPR	10	Unmodified	_LRKKQRRLPR_					0	0	0		ENSG00000188993|ENST00000682860|LRRC66	ENSG00000188993|ENST00000682860|LRRC66	ENSG00000188993|ENST00000682860|LRRC66	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	338.478378	1349.8844	0.032273	1.0924E-05	-2.331	-0.00078899	-2.2987	-0.00077807	338.4773016067753	23.185	0.74202	24.836	24.467	25.209	1.6511	0.10337	-0.0009861	NaN	0.62683	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245840			20451	4888	9971	10010							0.22345733238717003
LRKKWRMKKKK	11	Unmodified	_LRKKWRMKKKK_					0	0	0			REV__ENSG00000139865|ENST00000553443|TTC6	REV__ENSG00000139865|ENST00000553443|TTC6	MSMS	GG20161007_CRH_Patient100_W632_02	4	765.5002929568291	2	765.50049	1528.98643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.1	1	107.26	106.76	107.76	0.16174								0	0	0	0.63775	1	45936	45936		0	0	1		+		20452	10112	9972	10011	23549	23549					0.24309263266104608
LRKPLVVQRT	10	Unmodified	_LRKPLVVQRT_					0	0	0		ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	ENSG00000007545|ENST00000397412|CRAMP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1987487673759	4	303.200208	1208.77173	-2.6152	-0.00079291	-1.0988	-0.00033316	-3.714	-0.0011261	303.19974912720943	33.008	0.91563	33.008	32.318	33.233	0					92	30	4	0	0	0	0.89803	1	13887	13887		1.4551	0.82829	1	5247200			20453	522	9973	10012	23550	23550					0.17569039722025082
LRKPRKKRAPV	11	Unmodified	_LRKPRKKRAPV_					0	0	0			REV__ENST00000417391.1_1_2:216974075-216975204:+|nuORF	REV__ENST00000417391.1_1_2:216974075-216975204:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9817077517509	4	337.980753	1347.89391	0.3906	0.00013202	3.4393	0.0011624	3.8299	0.0012944	337.981818844711	25.856	0.69783	26.108	25.797	26.495	0.25197					55	22	4	0	0	0	1.039	1	10768	10768		0.45452	0	1	2176100	+		20454	12952	9974	10013	23551	23551					0.2338750152425746
LRKQKKILFTK	11	Unmodified	_LRKQKKILFTK_					0	0	0			REV__ENST00000409788.7_1_2:231624786-231655623:+|nuORF	REV__ENST00000409788.7_1_2:231624786-231655623:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9705078005791	2	701.966471	1401.91839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.598	1	28.598	28.098	29.098	0								0	0	0	0.63775	1	11967	11967		2.9952	1.3426	1		+		20455	12919	9975	10014	23552	23552					0.23350716887102863
LRKRPLIFIHW	11	Unmodified	_LRKRPLIFIHW_					0	0	0		ENSG00000119915|ENST00000370005|ELOVL3	ENSG00000119915|ENST00000370005|ELOVL3	ENSG00000119915|ENST00000370005|ELOVL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	739.9620239138603	2	739.958981	1477.90341	2.4797	0.0018349	2.7435	0.0020301	5.2232	0.0038649	740.4629059997519	105.79	0.16717	105.95	105.83	106	0.15859					21	8	4	0	0	0	1.0393	1	45143	45143		0.35063	0	1	47050000			20456	2091	9976	10015	23553	23553					0.1835726980978052
LRKRPLIFIHW	11	Unmodified	_LRKRPLIFIHW_					0	0	0		ENSG00000119915|ENST00000370005|ELOVL3	ENSG00000119915|ENST00000370005|ELOVL3	ENSG00000119915|ENST00000370005|ELOVL3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	739.958981	1477.90341	2.6835	0.0019857	2.1336	0.0015788	4.8171	0.0035645	740.4625223387231	105.77	0.16756	105.94	105.81	105.97	0.16679	-0.0074905	-0.00050025	NaN	0.35063	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22357000			20457	2091	9976	10015							0.1835726980978052
LRKRRRDI	8	Unmodified	_LRKRRRDI_					0	0	0			REV__nc|ENSG00000032219|P29374-3|ARID4A	REV__nc|ENSG00000032219|P29374-3|ARID4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3632690310478	2	556.859798	1111.70504	0.83664	0.00046589	2.4103	0.0013422	3.247	0.0018081	556.8610206767912	56.432	0.18659	57.846	57.784	57.971	1.4145					7	5	2	0	0	0	0.8873	1	23665	23665		4.3292	0	1	848970	+		20458	8578	9977	10016	23554	23554					0.15365848950773398
LRKRRRDI	8	Unmodified	_LRKRRRDI_					0	0	0			REV__nc|ENSG00000032219|P29374-3|ARID4A	REV__nc|ENSG00000032219|P29374-3|ARID4A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	556.859798	1111.70504	0.83664	0.00046589	2.4103	0.0013422	3.247	0.0018081	556.8610206767912	56.432	0.18659	57.846	57.784	57.971	1.4145	-0.02449	6.5547E-05	NaN	4.3292	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	848970	+		20459	8578	9977	10016							0.15365848950773398
LRKRRRDI	8	Unmodified	_LRKRRRDI_					0	0	0			REV__nc|ENSG00000032219|P29374-3|ARID4A	REV__nc|ENSG00000032219|P29374-3|ARID4A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	556.859798	1111.70504	0.89473	0.00049824	2.0078	0.0011181	2.9026	0.0016163	556.8615313357866	55.927	0.15298	57.895	57.78	57.933	1.9684	0.02449	-0.00038272	NaN	4.3292	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536650	+		20460	8578	9977	10016							0.15365848950773398
LRKRSIKMRKT	11	Unmodified	_LRKRSIKMRKT_					0	0	0			REV__ENST00000487931.1_1_1:78444877-78481928:+|nuORF	REV__ENST00000487931.1_1_1:78444877-78481928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.9709350466728	3	472.969645	1415.88711	0.603	0.0002852	2.6396	0.0012484	3.2426	0.0015336	472.9708355201625	33.955	0.30082	35.229	35.051	35.352	1.2746					72	32	3	0	0	0	1.0388	1	14274	14274		0.50596	0.051438	1	30915000	+		20461	10651	9978	10017	23555	23555					0.19579820581338936
LRKYKMWYIWH	11	Unmodified	_LRKYKMWYIWH_					0	0	0			REV__ENST00000312814.10_1_7:112424908-112424962:-|nuORF	REV__ENST00000312814.10_1_7:112424908-112424962:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.9618408083916	3	541.958746	1622.85441	1.7861	0.00096798	1.6784	0.00090963	3.4645	0.0018776	541.9595950651199	41.946	0.34967	42.267	42.103	42.452	0.32058					27	11	3	0	0	0	1.0402	1	17638	17638		0.094841	0	1	1104500	+		20462	12373	9979	10018	23556	23556					0.06789613458522581
LRLGLRLPAP	10	Unmodified	_LRLGLRLPAP_					0	0	0			REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3634521365166	2	553.36385	1104.71315	3.0279	0.0016755	-2.0881	-0.0011555	0.93973	0.00052001	553.3614911766953	108.82	0.19595	108.98	108.85	109.05	0.15898					21	9	3	0	0	0	0.89803	1	47115	47115		1.6526	0	1	30617000	+		20463	14110	9980	10019	23557	23557					0.16497983147542072
LRLGLRLPAP	10	Unmodified	_LRLGLRLPAP_					0	0	0			REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	553.36385	1104.71315	2.7106	0.0014999	2.7936	0.0015459	5.5042	0.0030458	553.8684485040429	108.81	0.10671	108.87	108.81	108.92	0.050644	-0.055432	0.0057403	NaN	1.6526	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	942030	+		20464	14110	9980	10019							0.16497983147542072
LRLGLRLPAP	10	Unmodified	_LRLGLRLPAP_					0	0	0			REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	553.36385	1104.71315	3.0279	0.0016755	-2.0881	-0.0011555	0.93973	0.00052001	553.3614911766953	108.82	0.19595	108.98	108.85	109.05	0.15898	0.057851	0.00033754	NaN	1.6526	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30617000	+		20465	14110	9980	10019							0.16497983147542072
LRLGLRLPAP	10	Unmodified	_LRLGLRLPAP_					0	0	0			REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	REV__ENST00000598809.5_1_19:50529209-50534310:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	553.36385	1104.71315	3.1506	0.0017434	-3.3069	-0.0018299	-0.15626	-8.647E-05	553.3612225261916	108.76	0.17838	108.92	108.83	109.01	0.1548	-0.0024186	-0.0010113	NaN	1.6526	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14438000	+		20466	14110	9980	10019							0.16497983147542072
LRLLGQLLRV	10	Unmodified	_LRLLGQLLRV_					0	0	0		nc|ENSG00000160570|Q8WXF8-2|DEDD2;ENSG00000160570|ENST00000596251|DEDD2	nc|ENSG00000160570|Q8WXF8-2|DEDD2	nc|ENSG00000160570|Q8WXF8-2|DEDD2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	394.5182372927666	3	394.267797	1179.78156	-0.34172	-0.00013473	-4.4659	-0.0017608	-4.8076	-0.0018955	394.26760816537035	31.885	0.69245	31.885	31.441	32.134	0					46	21	4	0	0	0	0.12556	1	13279	13279		1.9064	0	1	1842700			20467	3565	9981	10020	23558	23558					0.19886227727397454
LRLLPRLDR	9	Unmodified	_LRLLPRLDR_					0	0	0		ENSG00000135519|ENST00000257981|KCNH3	ENSG00000135519|ENST00000257981|KCNH3	ENSG00000135519|ENST00000257981|KCNH3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1532165408134	3	384.583897	1150.72986	0.61176	0.00023527	-2.9848	-0.0011479	-2.373	-0.00091263	384.58305556034213	30.89	0.22099	32.705	32.543	32.764	1.8151					13	7	2	0	0	0	0.11954	1	12968	12968		0.26902	0	1	613700			20468	2671	9982	10021	23559	23559					0.1605248403348014
LRLLRAQWR	9	Unmodified	_LRLLRAQWR_					0	0	0		ENST00000392813.8_1_3:158519897-158520086:+|nuORF	ENST00000392813.8_1_3:158519897-158520086:+|nuORF	ENST00000392813.8_1_3:158519897-158520086:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1801025271416	3	404.587641	1210.74109	0.47374	0.00019167	2.7535	0.001114	3.2273	0.0013057	404.5889504078675	24.284	0.36666	25.969	25.722	26.089	1.6845					19	11	2	0	0	0	0.11941	1	10094	10094		0.23584	0	1	566210			20469	6263	9983	10022	23560	23560					0.14415306127625627
LRLRKFKHELL	11	Unmodified	_LRLRKFKHELL_					0	0	0		NSUN6|p.P11Lfs*20|1|0.03|ENSG00000241058|chr10:18651172-18651173|-/AAGTTCATGTTTAAATTTCCTGA|frameshift_variant	NSUN6|p.P11Lfs*20|1|0.03|ENSG00000241058|chr10:18651172-18651173|-/AAGTTCATGTTTAAATTTCCTGA|frameshift_variant	NSUN6|p.P11Lfs*20|1|0.03|ENSG00000241058|chr10:18651172-18651173|-/AAGTTCATGTTTAAATTTCCTGA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2533141970634	4	363.984498	1451.90889	-1.2304	-0.00044785	0.19275	7.0156E-05	-1.0377	-0.0003777	363.98436579989755	31.457	0.18491	31.457	31.38	31.565	0					6	5	2	0	0	0	0.14606	1	13160	13160		0	0	1	231330			20470	8039	9984	10023	23561	23561					0.20100948601634627
LRLSNKTSI	9	Unmodified	_LRLSNKTSI_					0	0	0			REV__nc|ENSG00000196678|A8K979-2|ERI2	REV__nc|ENSG00000196678|A8K979-2|ERI2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3154174685478	2	516.314023	1030.61349	2.2932	0.001184	2.5953	0.00134	4.8886	0.002524	516.3143355967172	69.315	0.40836	70.681	70.53	70.939	1.3657					24	13	3	0	0	0	0.46566	1	29074	29074		17.113	0	1	4020000	+		20471	11645	9985	10024	23562	23562					0.0994112074295117
LRNKGSVLIP	10	Unmodified	_LRNKGSVLIP_					0	0	0		nc|ENSG00000131778|Q86WJ1-5|CHD1L;nc|ENSG00000131778|Q86WJ1-3|CHD1L;nc|ENSG00000131778|Q86WJ1-4|CHD1L;nc|ENSG00000131778|Q86WJ1-2|CHD1L;ENSG00000131778|ENST00000369258|CHD1L	nc|ENSG00000131778|Q86WJ1-5|CHD1L	nc|ENSG00000131778|Q86WJ1-5|CHD1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	366.2331420779228	3	366.232752	1095.67643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.108	1	59.108	58.608	59.608	0								0	0	0	0.66035	1	24649	24649		3.8763	0.28927	1				20472	2503	9986	10025	23563	23563					0.1324168653097786
LRNLAISKSH	10	Unmodified	_LRNLAISKSH_					0	0	0			REV__tr|A0A553SHQ9|A0A553SHQ9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_13430PE=4SV=1	REV__tr|A0A553SHQ9|A0A553SHQ9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_13430PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2284423708916	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.387	1	86.387	85.887	86.887	0								0	0	0	0.66222	1	36001	36001		0.69767	0	1		+		20473	14810	9987	10026	23564	23564					0.09851614382841944
LRNLAISKSH	10	Unmodified	_LRNLAISKSH_					0	0	0			REV__tr|A0A553SHQ9|A0A553SHQ9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_13430PE=4SV=1	REV__tr|A0A553SHQ9|A0A553SHQ9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_13430PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281677126884	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.106	1	78.415	77.915	78.915	0.30933								0	0	0	0.66222	1	32657	32657		0.69767	0.23933	1		+		20474	14810	9987	10026	23565	23565					0.09851614382841944
LRNNQRRQPK	10	Unmodified	_LRNNQRRQPK_					0	0	0			REV__ENSG00000005108|ENST00000423059|THSD7A	REV__ENSG00000005108|ENST00000423059|THSD7A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2578307986259	3	437.256843	1308.7487	1.8237	0.00079744	0.68587	0.0002999	2.5096	0.0010973	437.25680180361326	83.571	1.6615	83.571	82.8	84.461	0					112	53	3	0	0	0	0.89803	1	34902	34902		0.69767	0.1345	1	2658900	+		20475	8493	9988	10027	23566	23566					0.10667413657256475
LRNPPRKVRVR	11	Unmodified	_LRNPPRKVRVR_					0	0	0			REV__chr13:43059714-43068930|312|12.6|0.21|5.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	REV__chr13:43059714-43068930|312|12.6|0.21|5.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	348.4753906130791	4	348.477106	1389.87932	-1.6342	-0.00056947	-0.48548	-0.00016918	-2.1196	-0.00073865	348.4770199320388	31.871	0.9969	31.871	31.66	32.657	0					86	31	3	0	0	0	1.0402	1	13324	13324		0.094841	0	1	12753000	+		20476	8256	9989	10028	23567	23567					0.19997429376098808
LRNQLMCVAHL	11	Unmodified	_LRNQLMCVAHL_					0	0	0			REV__ENST00000435829.6_1_3:16344168-16344926:+|nuORF	REV__ENST00000435829.6_1_3:16344168-16344926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2340576052666	3	433.23377	1296.67948	2.1731	0.00094147	1.1243	0.00048707	3.2974	0.0014285	433.2342050868566	42.552	2.0747	42.872	42.404	44.478	0.32058					126	67	2	0	0	0	0.96769	1	18427	18427		2.6312	0	1	2894600	+		20477	13047	9990	10029	23568	23568					0.04300870321844741
LRPKREKRPRL	11	Unmodified	_LRPKREKRPRL_					0	0	0		ENST00000569957.5_1_16:30012641-30012857:+|nuORF;ENST00000562441.5_1_16:30012641-30015954:+|nuORF;ENSG00000169592|ENST00000563197|INO80E	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9882995486259	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.039	1	14246	14246		0.45452	0.29519	1	399160000			20478	4098	9991	10030	23569	23569					0.2151398506462101
LRPLQLLRRR	10	Unmodified	_LRPLQLLRRR_					0	0	0		ENST00000480549.5_1_1:36787373-36789572:+|nuORF	ENST00000480549.5_1_1:36787373-36789572:+|nuORF	ENST00000480549.5_1_1:36787373-36789572:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2231628298759	4	330.972928	1319.86261	0.12312	4.0749E-05	0.25666	8.4947E-05	0.37978	0.0001257	331.22354703715115	22.295	1.1264	22.518	21.992	23.119	0.223					50	37	2	0	0	0	0.89803	1	9440	9440		0.13989	0	1	1957000			20479	6818	9992	10031	23570	23570					0.21546928490147366
LRPPLTTRAR	10	Unmodified	_LRPPLTTRAR_					0	0	0			REV__ENST00000252840.10_1_19:7069470-7069548:+|nuORF	REV__ENST00000252840.10_1_19:7069470-7069548:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2478515505791	3	394.247285	1179.72002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.295	1	90.699	90.199	91.199	1.4045								0	0	0	0.6617	1	37622	37622		1.5923	0	1		+		20480	12148	9993	10032	23571	23571					0.13735296028107769
LRPQLRKPPH	10	Unmodified	_LRPQLRKPPH_					0	0	0			REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1241.761035144329	1	1241.75894	1240.75166	2.7393	0.0034016	-1.688	-0.002096	1.0514	0.0013055	1241.7566425868279	107.38	0.17078	107.53	107.45	107.62	0.15781					20	8	4	0	0	0	0.89803	1	46177	46177		0.40072	0.093686	1	49565000	+		20481	13132	9994	10033	23572	23572					0.14091288782060474
LRPQLRKPPH	10	Unmodified	_LRPQLRKPPH_					0	0	0			REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1241.75894	1240.75166	2.7393	0.0034016	-1.688	-0.002096	1.0514	0.0013055	1241.7566425868279	107.38	0.17078	107.53	107.45	107.62	0.15781	0.010087	-0.00049004	NaN	0.40072	20	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49565000	+		20482	13132	9994	10033							0.14091288782060474
LRPQLRKPPH	10	Unmodified	_LRPQLRKPPH_					0	0	0			REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	REV__ENST00000450804.3_1_11:72281759-72282275:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1241.75894	1240.75166	2.1499	0.0026697	-0.95288	-0.0011832	1.1971	0.0014865	1241.7576998773636	107.36	0.17149	107.51	107.43	107.6	0.15795	-0.010087	0.00042274	NaN	0.40072	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15494000	+		20483	13132	9994	10033							0.14091288782060474
LRPRKERKPRL	11	Unmodified	_LRPRKERKPRL_					0	0	0			REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6465637087822	3	483.647671	1447.92118	0.73339	0.0003547	-1.9708	-0.00095319	-1.2375	-0.00059849	483.64658448701994	30.819	0.56097	32.634	32.325	32.886	1.8151					66	18	4	0	0	0	1.0388	1	12867	12867		0.50596	0	1	17468000	+		20484	13905	9995	10034	23573	23573					0.2151398506462101
LRPRRLSQT	9	Unmodified	_LRPRRLSQT_					0	0	0		ENST00000500093.2_1_5:55291038-55291134:+|nuORF	ENST00000500093.2_1_5:55291038-55291134:+|nuORF	ENST00000500093.2_1_5:55291038-55291134:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2328979372978	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.397	1	85.397	84.897	85.897	0								0	0	0	0.42693	1	35580	35580		0.96228	0.33545	1				20485	6973	9996	10035	23574	23574					0.11526436476970048
LRPRRRHRAR	10	Unmodified	_LRPRRRHRAR_					0	0	0			REV__ENST00000405135.5_1_22:50969739-50970123:-|nuORF	REV__ENST00000405135.5_1_22:50969739-50970123:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1732055544853	3	458.623971	1372.85008	4.0742	0.0018685	-1.0746	-0.00049283	2.9996	0.0013757	458.623439074535	96.431	0.21617	96.715	96.589	96.806	0.28442					19	6	4	0	0	0	0.12561	1	40614	40614		0.15932	0.064481	1	11351000	+		20486	12894	9997	10036	23575	23575					0.17857329870480498
LRPTFWPV	8	Unmodified	_LRPTFWPV_					0	0	0		nc|ENSG00000072736|Q12968-3|NFATC3	nc|ENSG00000072736|Q12968-3|NFATC3	nc|ENSG00000072736|Q12968-3|NFATC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2919799685478	2	508.28982	1014.56509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.629	1	46.96	46.46	47.46	0.33034								0	0	0	1.0178	1	19564	19564		2.8892	0	1				20487	7832	9998	10037	23576	23576					0.058386718937072146
LRPVKLVMPL	10	Unmodified	_LRPVKLVMPL_					0	0	0			REV__ENST00000589515.2_1_19:2343134-2351610:+|nuORF	REV__ENST00000589515.2_1_19:2343134-2351610:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3782226443291	2	583.378112	1164.74167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.15	1	29.429	28.929	29.929	1.2789								0	0	0	0.66254	1	11799	11799		0.45834	0	1		+		20488	8495	9999	10038	23577	23577					0.16588964732477507
LRPVKLVMPL	10	Unmodified	_LRPVKLVMPL_					0	0	0			REV__ENST00000589515.2_1_19:2343134-2351610:+|nuORF	REV__ENST00000589515.2_1_19:2343134-2351610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2545959353447	3	389.2545	1164.74167	0.50243	0.00019557	-1.1578	-0.00045067	-0.65534	-0.00025509	389.2544596413454	27.379	0.9561	29.126	28.865	29.821	1.747					116	30	6	0	0	0	0.89803	1	11564	11564		0.69767	0	1	144500000	+		20489	8495	9999	10038	23578	23578					0.16588964732477507
LRQGRTTAVST	11	Unmodified	_LRQGRTTAVST_					0	0	0		ENST00000545320.1_1_11:60739240-60755419:+|nuORF;ENST00000542254.5_1_11:60739240-60750169:+|nuORF;ENST00000313421.11_1_11:60739174-60774067:+|nuORF	ENST00000545320.1_1_11:60739240-60755419:+|nuORF	ENST00000545320.1_1_11:60739240-60755419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	595.3369628787041	2	595.336018	1188.65748	1.5381	0.00091566	-0.93016	-0.00055376	0.60789	0.0003619	595.3355636000867	101.36	0.12125	101.36	101.29	101.41	0					8	3	3	0	0	0	0.97491	1	42443	42443		5.2969	1.7004	1	4240200			20490	5814	10000	10039	23579	23579					0.07070105169259477
LRQGVGRG	8	Unmodified	_LRQGVGRG_					0	0	0			REV__ENST00000585514.5_1_19:44983681-45004353:-|nuORF	REV__ENST00000585514.5_1_19:44983681-45004353:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7519714236259	2	421.751393	841.488233	0.70976	0.00029934	0.39117	0.00016498	1.1009	0.00046432	421.75135351229454	71.067	0.83904	71.067	70.449	71.288	0					54	26	3	0	0	0	0.89051	1	29509	29509		2.3027	0	1	4428000	+		20491	14024	10001	10040	23580	23580					0.061148733972345326
LRQLSPVIPLK	11	Unmodified	_LRQLSPVIPLK_					0	0	0			REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	REV__ENST00000585906.5_1_18:43437816-43497657:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	632.4090453982353	2	632.410998	1262.80744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.97	1	106.13	105.63	106.63	0.15859								0	0	0	0.63775	1	45264	45264		0.96228	0.56156	1		+		20492	10417	10002	10041	23581	23581					0.18655077179005275
LRRGVRAP	8	Unmodified	_LRRGVRAP_					0	0	0			REV__ENST00000370836.6_1_X:132092466-132092553:-|nuORF	REV__ENST00000370836.6_1_X:132092466-132092553:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8652526736259	3	308.866515	923.577717	0.60197	0.00018593	-3.1824	-0.00098293	-2.5804	-0.000797	308.86474242078737	33.075	0.74099	33.369	33.078	33.819	0.29431					51	25	3	0	0	0	0.89152	1	13912	13912		1.6526	0	1	1710500	+		20493	12665	10003	10042	23582	23582					0.112871280765944
LRRHLELSKS	10	Unmodified	_LRRHLELSKS_					0	0	0			REV__nc|ENSG00000126217|O15068-5|MCF2L	REV__nc|ENSG00000126217|O15068-5|MCF2L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8707763552666	2	619.870028	1237.7255	2.0914	0.0012964	-1.2415	-0.00076954	0.84999	0.00052689	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.89422	1	33181	33181		0	0	1	9211600	+		20494	9695	10004	10043	23583	23583					0.11614974819917734
LRRKCRLRVPV	11	Unmodified	_LRRKCRLRVPV_					0	0	0		ENST00000428040.6_1_6:30314274-30314612:+|nuORF	ENST00000428040.6_1_6:30314274-30314612:+|nuORF	ENST00000428040.6_1_6:30314274-30314612:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	698.4474365115166	2	698.445714	1394.87688	2.5398	0.0017739	-0.2422	-0.00016916	2.2976	0.0016047	698.4461695509656	105.79	0.13092	105.96	105.88	106.01	0.16679					19	6	4	0	0	0	1.0405	1	45085	45085		0	0	1	53740000			20495	6479	10005	10044	23584	23584					0.19523257646756065
LRRKPKILPRN	11	Unmodified	_LRRKPKILPRN_					0	0	0			REV__nc|ENSG00000107485|P23771|GATA3	REV__nc|ENSG00000107485|P23771|GATA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	348.2064391970634	4	348.483394	1389.90447	0.38657	0.00013471	2.9856	0.0010404	3.3722	0.0011752	348.4839453611739	30.713	0.15424	32.528	32.388	32.543	1.8151					6	4	2	0	0	0	0.14606	1	12852	12852		0.08335	0	1	272920	+		20496	9232	10006	10045	23585	23585					0.22511484178698993
LRRKQIRPRNL	11	Unmodified	_LRRKQIRPRNL_					0	0	0		ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.9808837771416	3	483.979421	1448.91643	1.549	0.0007497	2.8873	0.0013974	4.4364	0.0021471	483.9804369888814	34.237	0.32985	34.237	34.1	34.43	0					19	10	2	0	0	0	1.0366	1	14395	14395		0.40827	0	1	4821100			20497	5537	10007	10046	23586	23586					0.20993100921850782
LRRKQIRPRNL	11	Unmodified	_LRRKQIRPRNL_					0	0	0		ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	483.9823486208916	3	483.979421	1448.91643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.364	1	35.664	35.164	36.164	0.29942								0	0	0	0.63775	1	14858	14858		0.08335	0.010087	1				20498	5537	10007	10046	23587	23587					0.20993100921850782
LRRKQIRPRNL	11	Unmodified	_LRRKQIRPRNL_					0	0	0		ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	ENST00000225972.7_1_17:48460527-48462544:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6459838747978	3	483.979421	1448.91643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.021	1	34.846	34.346	35.346	1.8246								0	0	0	0.63775	1	13842	13842		0.40827	0.26837	1				20499	5537	10007	10046	23588	23588					0.20993100921850782
LRRLQERLRRK	11	Unmodified	_LRRLQERLRRK_					0	0	0		ENSG00000181215|ENST00000531445|C4orf50	ENSG00000181215|ENST00000531445|C4orf50	ENSG00000181215|ENST00000531445|C4orf50	MSMS	GG20161007_CRH_Patient100_W632_02	4	508.6616088747978	3	508.662092	1522.96445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.825	1	98.082	97.582	98.582	0.25636								0	0	0	0.63775	1	41158	41158		0.094841	0	1				20500	4571	10008	10047	23589	23589					0.22388174841898945
LRRLRLRLRLL	11	Unmodified	_LRRLRLRLRLL_					0	0	0			REV__ENST00000234111.8_1_2:10588250-10588409:-|nuORF	REV__ENST00000234111.8_1_2:10588250-10588409:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3499023318291	3	493.347444	1477.0205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.56	1	108.72	108.22	109.22	0.15898								0	0	0	0.63775	1	46964	46964		0	0	1		+		20501	12112	10009	10048	23590	23590					0.3010742774938535
LRRPKVAERA	10	Unmodified	_LRRPKVAERA_					0	0	0			REV__ENST00000359827.7_1_7:132261385-132261478:-|nuORF	REV__ENST00000359827.7_1_7:132261385-132261478:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2507812380791	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.138	1	23.138	22.638	23.638	0								0	0	0	0.66227	1	9642	9642		0.62683	0.063655	1		+		20502	12590	10010	10049	23591	23591					0.14134698402403956
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.9814636111259	4	337.983561	1347.90514	-2.1625	-0.00073089	-2.532	-0.00085577	-4.6945	-0.0015867	338.2337563072072	28.01	1.2177	28.01	27.562	28.779	0					77	39	4	0	0	0	0.89803	3	11694	11694;11746;11793		0	0	1	7174500	+		20503	13149	10011	10050	23592;23593;23594	23592					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.0812560915947	4	337.983561	1347.90514	0.58663	0.00019827	-2.3657	-0.00079955	-1.779	-0.00060128	337.982514294212	29.57	1.4463	29.849	29.016	30.462	0.2793					107	47	3	0	0	0	0.12561	1	12519	12519		0	0	1	1649400	+		20504	13149	10011	10050	23595	23595					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9832641482353	4	337.983561	1347.90514	-0.21253	-7.1832E-05	-1.5876	-0.00053658	-1.8001	-0.00060842	337.98291240513004	28.121	1.1939	29.4	28.72	29.913	1.2789					100	38	3	0	0	0	0.89803	3	11607	11607;11721;11824		0	0	1	1278800	+		20505	13149	10011	10050	23596;23597;23598	23596					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.0453063845634	4	337.983561	1347.90514	-0.21253	-7.1832E-05	-1.5876	-0.00053658	-1.8001	-0.00060842	337.98291240513004	28.121	1.1939	29.4	28.72	29.913	1.2789					100	38	3	0	0	0	0.12561	1	11914	11914		0	0	1	1278800	+		20506	13149	10011	10050	23599	23599					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9835082888603	4	337.983561	1347.90514	0.1972	6.6652E-05	-1.572	-0.00053132	-1.3748	-0.00046467	337.98285977027405	27.295	1.1438	29.042	28.524	29.668	1.747					85	36	3	0	0	0	0.89803	5	11260	11260;11321;11414;11490;11600		0	0	1	1891400	+		20507	13149	10011	10050	23600;23601;23602;23603;23604	23600					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.2020751833916	4	337.983561	1347.90514	0.1972	6.6652E-05	-1.572	-0.00053132	-1.3748	-0.00046467	337.98285977027405	27.295	1.1438	29.042	28.524	29.668	1.747					85	36	3	0	0	0	0.12561	1	11237	11237		0.13989	0	1	1891400	+		20508	13149	10011	10050	23605	23605					0.24510323618369512
LRRRLLPRLR	10	Unmodified	_LRRRLLPRLR_					0	0	0			REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	REV__ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	337.983561	1347.90514	0.22456	7.5899E-05	-3.8185	-0.0012906	-3.5939	-0.0012147	337.98233754835195	28.13	0.39764	29.905	29.634	30.031	1.7754	0.028165	-0.0010219	NaN	0	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	537870	+		20509	13149	10011	10050							0.24510323618369512
LRRRRKKISYR	11	Unmodified	_LRRRRKKISYR_					0	0	0		ENST00000395183.6_1_4:86699881-86700061:+|nuORF	ENST00000395183.6_1_4:86699881-86700061:+|nuORF	ENST00000395183.6_1_4:86699881-86700061:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	766.4969360232353	2	766.492042	1530.96953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.78	1	107.94	107.44	108.44	0.15781								0	0	0	0.63775	1	46455	46455		0	0	1				20510	6291	10012	10051	23606	23606					0.22528478704543886
LRRRRRVHR	9	Unmodified	_LRRRRRVHR_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.0085327029228	4	326.964432	1303.82862	1.1113	0.00036335	1.6452	0.00053791	2.7564	0.00090126	327.2155728912034	48.59	0.79766	48.92	48.586	49.384	0.33034					40	25	2	0	0	0	0.11955	1	20373	20373		0.23584	0.095952	1	1097000			20511	1803	10013	10052	23607	23607					0.18885944841758828
LRRRRRVHR	9	Unmodified	_LRRRRRVHR_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	327.0085632205009	4	326.964432	1303.82862	1.6464	0.00053831	0.85619	0.00027994	2.5026	0.00081825	327.2153276173921	46.879	0.62815	48.855	48.653	49.282	1.976					35	19	2	0	0	0	0.11955	1	19803	19803		0.23584	0.095952	1	1127200			20512	1803	10013	10052	23608	23608					0.18885944841758828
LRRRVHDLHQR	11	Unmodified	_LRRRVHDLHQR_					0	0	0			REV__ENST00000527981.1_1_14:59950407-59951094:-|nuORF	REV__ENST00000527981.1_1_14:59950407-59951094:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9600402712822	3	495.958908	1484.85489	1.913	0.00094878	0.91349	0.00045305	2.8265	0.0014018	495.9591137591809	90.637	1.2817	90.637	90	91.281	0					98	40	4	0	0	0	1.0395	1	37939	37939		0.08335	0	1	4164400	+		20513	9703	10014	10053	23609	23609					0.13186169222581157
LRRRVLLRRP	10	Unmodified	_LRRRVLLRRP_					0	0	0		ENST00000528318.5_1_8:42716773-42751856:-|nuORF;ENST00000526349.5_1_8:42729111-42751823:-|nuORF;ENST00000534961.5_1_8:42742976-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4784423708916	4	334.479649	1333.88949	0.15925	5.3265E-05	-2.5796	-0.00086283	-2.4204	-0.00080957	334.47872159816603	26.805	1.0178	28.552	28.308	29.326	1.747					92	33	3	0	0	0	0.89803	1	11297	11297		0.13989	0.13989	1	2439000			20514	7146	10015	10054	23610	23610					0.2359003710134857
LRRRWRRP	8	Unmodified	_LRRRWRRP_					0	0	0		ENST00000418337.6_2_7:151292537-151329253:-|nuORF;ENST00000493872.5_1_7:151328836-151329256:-|nuORF	ENST00000418337.6_2_7:151292537-151329253:-|nuORF	ENST00000418337.6_2_7:151292537-151329253:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2524291872978	3	399.251363	1194.73226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.955	1	90.011	89.511	90.511	1.0562								0	0	0	1.0178	1	37495	37495		0.40072	0	1				20515	6424	10016	10055	23611	23611					0.14268377281814537
LRRRWRRRRWG	11	Unmodified	_LRRRWRRRRWG_					0	0	0			REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	827.4985229372978	2	827.498524	1652.9825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.082	1	52.082	51.582	52.582	0								0	0	0	0.63775	1	21722	21722		0	0	1		+		20516	14098	10017	10056	23612	23612					0.18212354607248926
LRRVVRLPAR	10	Unmodified	_LRRVVRLPAR_					0	0	0		ENST00000510023.5_1_17:47074855-47081966:+|nuORF	ENST00000510023.5_1_17:47074855-47081966:+|nuORF	ENST00000510023.5_1_17:47074855-47081966:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.8650085330009	4	309.709737	1234.80984	-2.5819	-0.00079964	-1.17	-0.00036236	-3.7519	-0.001162	309.70985717846844	33.681	0.27717	33.681	33.577	33.854	0					14	8	2	0	0	0	0.12538	1	14138	14138		3.3196	1.5774	1	509290			20517	7025	10018	10057	23613	23613					0.20182970427345026
LRSKFIKQWRK	11	Unmodified	_LRSKFIKQWRK_					0	0	0			REV__ENSG00000185825|ENST00000345046|BCAP31	REV__ENSG00000185825|ENST00000345046|BCAP31	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.9751464724541	3	497.308655	1488.90414	3.6213	0.0018009	-4.2395	-0.0021083	-0.61824	-0.00030746	497.30650996535803	97.86	0.12311	98.088	98.011	98.134	0.22776					5	3	2	0	0	0	0.14606	1	41181	41181		0.50596	0.09769	1	10264000	+		20518	11475	10019	10058	23614	23614					0.17924064458816247
LRSPLLLGRRG	11	Unmodified	_LRSPLLLGRRG_					0	0	0			REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	REV__nc|ENSG00000141556|Q9BTW9-5|TBCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2646362185478	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.932	1	62.932	62.432	63.432	0								0	0	0	0.63775	1	26238	26238		1.1098	0.41209	1		+		20519	10156	10020	10059	23615	23615					0.1689555795353499
LRSQAPKVTRL	11	Unmodified	_LRSQAPKVTRL_					0	0	0			REV__ENST00000481773.1_1_3:113933257-113952219:+|nuORF	REV__ENST00000481773.1_1_3:113933257-113952219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.9328491091728	3	423.598094	1267.77245	2.9923	0.0012675	-1.1021	-0.00046686	1.8902	0.00080067	423.5975609144342	94.261	0.56697	94.406	94.133	94.7	0.14494					63	17	5	0	0	0	1.0391	1	39384	39384		0.40827	0.041592	1	24397000	+		20520	13364	10021	10060	23616	23616					0.1492783437106482
LRSRAQKRREA	11	Unmodified	_LRSRAQKRREA_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9102661013603	2	685.908008	1369.80146	2.7523	0.0018878	0.75516	0.00051797	3.5075	0.0024058	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.0366	1	35601	35601		1.1933	0	1	4137900			20521	2799	10022	10061	23617	23617					0.13135371720090916
LRSRAQKRREA	11	Unmodified	_LRSRAQKRREA_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9114868044853	2	685.908008	1369.80146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.461	1	85.62	85.12	86.12	1.159								0	0	0	0.63775	1	35441	35441		1.1933	0	1				20522	2799	10022	10061	23618	23618					0.13135371720090916
LRSWWPRWWWA	11	Unmodified	_LRSWWPRWWWA_					0	0	0		ENST00000355943.7_1_5:110074744-110074849:+|nuORF	ENST00000355943.7_1_5:110074744-110074849:+|nuORF	ENST00000355943.7_1_5:110074744-110074849:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	815.4174682497978	2	815.414937	1628.81532	1.6592	0.0013529	1.7659	0.0014399	3.4251	0.0027928	815.4161879225626	39.699	0.42888	40.012	39.767	40.196	0.31263					38	13	4	0	0	0	1.0395	1	16682	16682		0.30703	0	1	1919300			20523	5983	10023	10062	23619	23619					0.026066492191603174
LRTWWFPG	8	Unmodified	_LRTWWFPG_					0	0	0			REV__ENST00000394906.6_1_17:27206365-27206722:-|nuORF	REV__ENST00000394906.6_1_17:27206365-27206722:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0702087283134	3	354.855505	1061.54469	1.0353	0.00036737	2.9172	0.0010352	3.9524	0.0014025	355.19113664321236	70.569	0.46385	70.892	70.647	71.111	0.32224					24	14	2	0	0	0	2.3239	1	29629	29629		1.6526	0	1	1856800	+		20524	12831	10024	10063	23620	23620					0.01637501233904004
LRWERFAS	8	Unmodified	_LRWERFAS_					0	0	0			REV__ENSG00000171873|ENST00000379453|ADRA1D	REV__ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0697509646416	3	355.526047	1063.55631	-1.1656	-0.00041439	-3.2627	-0.00116	-4.4283	-0.0015744	355.85883851695024	71.212	0.47475	71.212	70.94	71.415	0					22	14	2	0	0	0	2.3239	1	29584	29584		1.4819	0	1	863480	+		20525	11048	10025	10064	23621	23621					0.027076982571998087
LRWLKALPRVT	11	Unmodified	_LRWLKALPRVT_					0	0	0		ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.9706909060478	4	338.968583	1351.84522	0.77786	0.00026367	3.3555	0.0011374	4.1334	0.0014011	339.22001085112146	32.88	0.90034	33.174	32.621	33.521	0.29431					79	30	4	0	0	0	1.0369	2	13631	13631;13682		1.1098	0.65524	1	4237600			20526	1933	10026	10065	23622;23623	23622					0.18337588164467888
LRWLKLRKRK	10	Unmodified	_LRWLKLRKRK_					0	0	0		ENST00000468157.5_1_6:33255793-33256956:-|nuORF	ENST00000468157.5_1_6:33255793-33256956:-|nuORF	ENST00000468157.5_1_6:33255793-33256956:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.9737426638603	2	698.972422	1395.93029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.66	1	44.66	44.16	45.16	0								0	0	0	0.66166	1	18689	18689		1.6526	0.17072	1				20527	6715	10027	10066	23624	23624					0.24816378420950969
LRWLKLRKRK	10	Unmodified	_LRWLKLRKRK_					0	0	0		ENST00000468157.5_1_6:33255793-33256956:-|nuORF	ENST00000468157.5_1_6:33255793-33256956:-|nuORF	ENST00000468157.5_1_6:33255793-33256956:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.9707519412041	2	698.972422	1395.93029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.301	1	48.301	47.801	48.801	0								0	0	0	0.6624	1	20174	20174		0.40072	0.050084	1				20528	6715	10027	10066	23625	23625					0.24816378420950969
LRWLQLYIYK	10	Unmodified	_LRWLQLYIYK_					0	0	0		ENSG00000101323|ENST00000378789|HAO1	ENSG00000101323|ENST00000378789|HAO1	ENSG00000101323|ENST00000378789|HAO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	698.4117309451103	2	698.410998	1394.80744	2.7484	0.0019195	-0.49077	-0.00034276	2.2576	0.0015768	698.41061707632	105.83	0.077316	105.99	105.96	106.04	0.15859					8	3	3	0	0	0	0.89803	1	45183	45183		0.40072	0	1	25549000			20529	1338	10028	10067	23626	23626					0.12583077179010616
LRWRFWWEYVN	11	Unmodified	_LRWRFWWEYVN_					0	0	0			REV__ENSG00000127995|ENST00000297273|CASD1	REV__ENSG00000127995|ENST00000297273|CASD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	827.8221923708916	2	827.91751	1653.82047	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.14	1	112.28	111.78	112.78	0.14912								0	0	0	0.63775	1	48588	48588		0	0	1		+		20530	9724	10029	10068	23627	23627					0.019709082911504083
LRYYRVKKKPK	11	Unmodified	_LRYYRVKKKPK_					0	0	0		tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	tr|A0A7D6VRC6|A0A7D6VRC6_9CLOTUPF0229proteinHZF06_05025OS=ClostridiumintestinaleOX=36845GN=yhbHPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1016418337822	4	370.488411	1477.92454	-0.28113	-0.00010416	2.5095	0.00092974	2.2284	0.00082558	370.48943230003385	31.395	1.1917	32.676	32.088	33.28	1.2813					82	38	3	0	0	0	0.14606	1	12988	12988		0.08335	0.08335	1	1700100			20531	16828	10030	10069	23628	23628					0.2046923511861678
LSAAWVTLV	9	Unmodified	_LSAAWVTLV_					0	0	0			REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2820312380791	2	480.28166	958.548768	3.4616	0.0016625	-1.6693	-0.00080176	1.7922	0.00086076	480.28058798983074	74.347	0.42074	75.665	75.438	75.859	1.318					28	13	3	0	0	0	0.24063	1	31208	31208		28.487	1.6032	1	1536800	+		20532	11138	10031	10070	23629	23629					0.06783545936946211
LSAAWVTLV	9	Unmodified	_LSAAWVTLV_					0	0	0			REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.28166	958.548768	3.4616	0.0016625	-1.6693	-0.00080176	1.7922	0.00086076	480.28058798983074	74.347	0.42074	75.665	75.438	75.859	1.318	-0.019617	-0.00038993	NaN	28.487	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1536800	+		20533	11138	10031	10070							0.06783545936946211
LSAAWVTLV	9	Unmodified	_LSAAWVTLV_					0	0	0			REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	REV__GPR149|p.R262Lfs*52|1|0.05|ENSG00000174948|chr3:154428833-154428834|-/GACTTTTGAAAGGAGAAGCATTTAGT|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	480.28166	958.548768	2.9088	0.001397	-0.71329	-0.00034258	2.1955	0.0010544	480.2812864754476	73.908	0.49159	75.704	75.409	75.9	1.7962	0.019617	0.00052843	NaN	28.487	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	912760	+		20534	11138	10031	10070							0.06783545936946211
LSADIFQQV	9	Unmodified	_LSADIFQQV_					0	0	0		nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;ENSG00000102908|ENST00000349945|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7732421755791	2	510.771657	1019.52876	3.2376	0.0016537	-0.52816	-0.00026977	2.7095	0.0013839	510.7716818330107	62.561	0.36427	63.974	63.711	64.075	1.4134					18	11	2	0	0	0	0.09539	1	26245	26245		50.855	8.7605	1	2693400			20535	1403	10032	10071	23630	23630					0.019777502063448082
LSADIFQQV	9	Unmodified	_LSADIFQQV_					0	0	0		nc|ENSG00000102908|O94916-2|NFAT5;nc|ENSG00000102908|O94916|NFAT5;nc|ENSG00000102908|O94916-4|NFAT5;ENSG00000102908|ENST00000349945|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	nc|ENSG00000102908|O94916-2|NFAT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7722350955009	2	510.771657	1019.52876	3.3336	0.0017027	2.9847	0.0015245	6.3183	0.0032272	510.7733574935782	62.031	0.45142	63.988	63.815	64.267	1.9571					24	14	3	0	0	0	0.09539	1	26042	26042		50.855	8.7605	1	1234500			20536	1403	10032	10071	23631	23631					0.019777502063448082
LSAQPPFPSV	10	Unmodified	_LSAQPPFPSV_					0	0	0			REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.7812377810478	2	521.782025	1041.5495	2.0802	0.0010854	-2.9773	-0.0015535	-0.8971	-0.00046809	521.7801909109594	76.029	0.40691	76.029	75.82	76.226	0					35	12	4	0	0	0	0.4341	2	31618	31618;31663		31.268	5.0002	1	5893500	+		20537	12933	10033	10072	23632;23633	23632					0.030383405859993218
LSAQPPFPSV	10	Unmodified	_LSAQPPFPSV_					0	0	0			REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.7808715701103	2	521.782025	1041.5495	2.5882	0.0013505	-3.0876	-0.001611	-0.49935	-0.00026055	521.7803048621669	75.617	0.43379	75.939	75.71	76.144	0.32163					38	13	4	0	0	0	0.4341	1	31572	31572		31.268	3.6395	1	6739000	+		20538	12933	10033	10072	23634	23634					0.030383405859993218
LSAQPPFPSV	10	Unmodified	_LSAQPPFPSV_					0	0	0			REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7819702029228	2	521.782025	1041.5495	3.3953	0.0017716	-2.9049	-0.0015157	0.49043	0.0002559	521.780506879469	74.581	0.54096	75.887	75.549	76.09	1.3063					44	17	3	0	0	0	0.19531	1	31304	31304		49.554	5.5724	1	14681000	+		20539	12933	10033	10072	23635	23635					0.030383405859993218
LSAQPPFPSV	10	Unmodified	_LSAQPPFPSV_					0	0	0			REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	REV__ENST00000414790.5_2_11:2018386-2018629:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7820922732353	2	521.782025	1041.5495	2.9555	0.0015421	-2.2167	-0.0011566	0.73882	0.0003855	521.7808087779347	74.089	0.54574	75.885	75.536	76.082	1.7962					43	17	3	0	0	0	0.4341	1	31099	31099		31.268	5.0002	1	12157000	+		20540	12933	10033	10072	23636	23636					0.030383405859993218
LSARAPPWV	9	Unmodified	_LSARAPPWV_					0	0	0		ENST00000519168.5_1_8:125568609-125571000:-|nuORF	ENST00000519168.5_1_8:125568609-125571000:-|nuORF	ENST00000519168.5_1_8:125568609-125571000:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7846252322197	2	498.784902	995.55525	1.5205	0.0007584	-2.3482	-0.0011712	-0.82771	-0.00041285	498.783646074464	66.774	0.31595	66.774	66.608	66.924	0					16	9	2	0	0	0	0.61249	1	27864	27864		10.824	0.75	1	574660			20541	7066	10034	10073	23637	23637					0.05729483888319464
LSARRAGRPLA	11	Unmodified	_LSARRAGRPLA_					0	0	0			REV__ENST00000239223.3_1_5:172197224-172198187:-|nuORF	REV__ENST00000239223.3_1_5:172197224-172198187:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3590576052666	2	584.357088	1166.69962	1.9193	0.0011216	-1.138	-0.00066499	0.78131	0.00045656	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	1.0366	1	30942	30942		1.1933	0.50296	1	6168700	+		20542	12120	10035	10074	23638	23638					0.122941253683166
LSASKGKRQ	9	Unmodified	_LSASKGKRQ_					0	0	0			REV__ZNF234-CEACAM20|3|fusion	REV__ZNF234-CEACAM20|3|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7947265505791	2	487.790715	973.566878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.974	1	62.304	61.804	62.804	0.32974								0	0	0	0.42089	1	25966	25966		6.7232	0	1		+		20543	15939	10036	10075	23639	23639					0.07903680911670108
LSASLKNFHR	10	Unmodified	_LSASLKNFHR_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|23|1|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|23|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3306762576103	2	586.830372	1171.64619	2.2237	0.0013049	2.7391	0.0016074	4.9628	0.0029123	586.8323247899473	67.987	0.68533	69.857	69.549	70.234	1.87					87	21	6	0	0	0	0.5476	1	28617	28617		25.399	1.3787	1	33491000	+		20544	14190	10037	10076	23640	23640					0.06723327865779538
LSASLVRIL	9	Unmodified	_LSASLVRIL_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3165466189384	2	486.316035	970.617516	1.2029	0.00058499	-0.048764	-2.3715E-05	1.1541	0.00056128	486.31599646969977	57.211	0.44663	58.625	58.4	58.846	1.4145					45	15	4	0	0	0	0.0060384	4	23970	23923;23970;24022;24070		118.07	32.427	1	48691000			20545	615	10038	10077	23641;23642;23643;23644	23642					0.13103210236658924
LSASLVRIL	9	Unmodified	_LSASLVRIL_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;nc|ENSG00000022556|Q9NX02-3|NLRP2;ENST00000540597.5_1_19:55476735-55501561:+|nuORF;NLRP2|p.H837Rfs*54|2|0.08|ENSG00000022556|chr19:54990164-54990165|-/G|frameshift_variant	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3168212771416	2	486.316035	970.617516	0.88421	0.00043	0.6835	0.0003324	1.5677	0.0007624	486.31635131814465	56.592	0.41682	58.56	58.334	58.751	1.9684					45	13	5	0	0	0	0.0037498	3	23737	23688;23737;23789		125.53	32.427	1	42430000			20546	615	10038	10077	23645;23646;23647	23646					0.13103210236658924
LSATFVVLS	9	Unmodified	_LSATFVVLS_					0	0	0			REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	REV__nc|ENSG00000102452|Q8IZF0-2|NALCN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.5421020388603	1	936.54006	935.532783	3.6047	0.003376	-0.59371	-0.00055604	3.011	0.0028199	936.5396721042447	81.533	0.40242	82.766	82.564	82.966	1.2332					23	12	3	0	0	0	0.033794	1	34210	34210		81.613	7.1903	1	3204300	+		20547	9072	10039	10078	23648	23648					0.06243839700039189
LSCHDPRL	8	Unmodified	_LSCHDPRL_					0	0	0			REV__ENST00000555825.5_1_14:104201493-104202681:-|nuORF	REV__ENST00000555825.5_1_14:104201493-104202681:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.7372619509697	2	470.737094	939.459635	2.8736	0.0013527	-0.31112	-0.00014645	2.5625	0.0012063	470.7368015441328	79.741	0.37074	80.992	80.739	81.109	1.2512					17	11	2	0	0	0	0.83505	1	33473	33473		16.942	0	1	984990	+		20548	13867	10040	10079	23649	23649					-0.012516122942315633
LSCRCCWVP	9	Unmodified	_LSCRCCWVP_					0	0	0			REV__OSGIN2|p.Y428Sfs*2|1|0.07|ENSG00000164823|chr8:89925297-89925297|A/-|frameshift_variant	REV__OSGIN2|p.Y428Sfs*2|1|0.07|ENSG00000164823|chr8:89925297-89925297|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7366210818291	2	533.735183	1065.45581	1.8554	0.00099028	0.15739	8.4004E-05	2.0128	0.0010743	533.7349974672602	58.83	0.98412	60.249	59.942	60.926	1.4196					77	31	4	0	0	0	0.70108	1	24636	24636		7.2892	0	1	4519300	+		20549	10750	10041	10080	23650	23650					-0.07429741383953115
LSCRVGFSV	9	Unmodified	_LSCRVGFSV_					0	0	0		ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	MSMS	GG20161007_CRH_Patient100_A02_02	2	484.2570983767509	2	484.25512	966.495686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.819	1	61.147	60.647	61.647	0.32809								0	0	0	0.091705	1	25482	25482		36.127	2.0246	1				20550	4602	10042	10081	23651	23651					0.011098448826373897
LSCSDTHHI	9	Unmodified	_LSCSDTHHI_					0	0	0		ENSG00000165204|ENST00000277309|OR1K1	ENSG00000165204|ENST00000277309|OR1K1	ENSG00000165204|ENST00000277309|OR1K1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7300903201103	2	506.729466	1011.44438	2.2036	0.0011166	1.5387	0.00077972	3.7423	0.0018963	506.72997623507814	62.615	0.24811	62.944	62.788	63.036	0.32974					10	7	2	0	0	0	0.68551	1	26236	26236		7.9102	1.5561	1	269400			20551	3820	10043	10082	23652	23652					-0.0608852388206742
LSCSDTHHI	9	Unmodified	_LSCSDTHHI_					0	0	0		ENSG00000165204|ENST00000277309|OR1K1	ENSG00000165204|ENST00000277309|OR1K1	ENSG00000165204|ENST00000277309|OR1K1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	506.729466	1011.44438	2.8518	0.0014451	0.42255	0.00021412	3.2744	0.0016592	506.73063562069507	60.87	0.21244	62.835	62.76	62.973	1.9653	-0.10917	-0.0011618	NaN	7.9102	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634640			20552	3820	10043	10082							-0.0608852388206742
LSDADILDF	9	Unmodified	_LSDADILDF_					0	0	0		tr|A0A7D7A1F4|A0A7D7A1F4_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12270PE=4SV=1	tr|A0A7D7A1F4|A0A7D7A1F4_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12270PE=4SV=1	tr|A0A7D7A1F4|A0A7D7A1F4_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_12270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7494384646416	2	504.747847	1007.48114	1.9235	0.0009709	-0.05905	-2.9805E-05	1.8645	0.0009411	504.747666749063	64.671	0.41492	66.599	66.294	66.709	1.928					30	12	3	0	0	0	0.12174	1	27069	27069		42.095	2.1372	1	5354700			20553	17238	10044	10083	23653	23653					-0.02229948784508906
LSDGLLVSL	9	Unmodified	_LSDGLLVSL_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.5462524294853	1	916.534975	915.527698	3.9982	0.0036645	-0.2355	-0.00021585	3.7627	0.0034486	916.5351184426917	93.143	0.35978	94.015	93.834	94.194	0.87176					16	10	2	0	0	0	0.10294	1	39172	39172		48.346	6.2513	1	2275300	+		20554	14503	10045	10084	23654	23654					0.06655535837421667
LSDGLLVSL	9	Unmodified	_LSDGLLVSL_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	916.5388061404228	1	916.534975	915.527698	3.2154	0.002947	-0.42548	-0.00038996	2.7899	0.0025571	916.5351257529508	92.714	0.28905	93.991	93.908	94.197	1.277					14	8	2	0	0	0	0.059546	2	39064	39010;39064		64.236	0	1	2069400	+		20555	14503	10045	10084	23655;23656	23656					0.06655535837421667
LSDGLLVSL	9	Unmodified	_LSDGLLVSL_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	916.534975	915.527698	1.7254	0.0015814	3.9808	0.0036485	5.7062	0.0052299	916.538431117824	94.247	0.25023	94.247	94.056	94.307	0	0.17084	0.0027816	NaN	64.236	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	784010	+		20556	14503	10045	10084							0.06655535837421667
LSDGLLVSL	9	Unmodified	_LSDGLLVSL_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	916.534975	915.527698	2.7411	0.0025123	-2.2379	-0.0020511	0.50316	0.00046116	916.5320422960476	93.907	0.34943	94.052	93.815	94.165	0.14493	-0.02421	-0.0029181	NaN	64.236	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	681020	+		20557	14503	10045	10084							0.06655535837421667
LSDGLLVSL	9	Unmodified	_LSDGLLVSL_					0	0	0			REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	REV__nc|ENSG00000182606|Q9UPV9-3|TRAK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	916.534975	915.527698	3.2154	0.002947	-0.42548	-0.00038996	2.7899	0.0025571	916.5351257529508	92.714	0.28905	93.991	93.908	94.197	1.277	-0.085187	-0.0012569	NaN	64.236	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2069400	+		20558	14503	10045	10084							0.06655535837421667
LSDGVAVLK	9	Unmodified	_LSDGVAVLK_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1;ENST00000530524.1_1_8:7748917-7749049:-|nuORF;ENST00000388966.4_1_12:8169981-8170332:-|nuORF	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2707397341728	2	451.271293	900.528032	0.82421	0.00037194	-1.6939	-0.00076439	-0.86966	-0.00039245	451.2705026609746	25.518	0.1847	27.235	27.119	27.304	1.7167					8	5	2	0	0	0	0.28372	1	10675	10675		26.268	2.2476	1	512430			20559	3074	10046	10085	23657	23657					0.07378955557283007
LSDLQRHLDSH	11	Unmodified	_LSDLQRHLDSH_					0	0	0		L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8401977419853	2	660.836382	1319.65821	2.3535	0.0015552	3.6846	0.0024349	6.0381	0.0039902	660.8389008454586	65.625	0.39786	67.023	66.849	67.247	1.3989					29	12	3	0	0	0	0.46674	1	27500	27500		24.991	2.3329	1	3143700			20560	7743	10047	10086	23658	23658					0.011168998183165968
LSDMRSLWKAN	11	Unmodified	_LSDMRSLWKAN_					0	0	0		SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant;SLC26A6|p.L617Gfs*9|1|0.16|ENSG00000225697|chr3:48627993-48627994|-/CACCCCTGACCTCCACCCCTGA|frameshift_variant;nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000496469.1_1_3:48667303-48668690:-|nuORF;ENST00000489483.5_1_3:48665668-48668656:-|nuORF	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8400756716728	2	660.840079	1319.66561	2.3534	0.0015552	-1.9094	-0.0012618	0.444	0.00029342	660.8389008454586	65.625	0.39786	67.023	66.849	67.247	1.3989					29	12	3	0	0	0	0.34699	1	27550	27550		28.495	2.2264	1	3143700			20561	5291	10048	10087	23659	23659					0.018559160944050745
LSDMRSLWKAN	11	Unmodified	_LSDMRSLWKAN_					0	0	0		SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant;SLC26A6|p.L617Gfs*9|1|0.16|ENSG00000225697|chr3:48627993-48627994|-/CACCCCTGACCTCCACCCCTGA|frameshift_variant;nc|ENSG00000225697|Q9BXS9-6|SLC26A6;nc|ENSG00000225697|Q9BXS9-5|SLC26A6;nc|ENSG00000225697|Q9BXS9-7|SLC26A6;nc|ENSG00000225697|Q9BXS9-4|SLC26A6;nc|ENSG00000225697|Q9BXS9-2|SLC26A6;nc|ENSG00000225697|Q9BXS9-3|SLC26A6;ENSG00000225697|ENST00000395550|SLC26A6;ENST00000496469.1_1_3:48667303-48668690:-|nuORF;ENST00000489483.5_1_3:48665668-48668656:-|nuORF	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	SLC26A6|p.T615Sfs*6|1|0.07|ENSG00000225697|chr3:48627995-48627996|-/CTACAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	660.8403808474541	2	660.840079	1319.66561	1.6878	0.0011154	-1.371	-0.00090598	0.31684	0.00020938	660.8392902745873	65.26	0.27905	67.168	67.001	67.28	1.9085					24	8	3	0	0	0	0.34699	2	27344	27344;27396		28.495	4.7047	1	3288200			20562	5291	10048	10087	23660;23661	23660					0.018559160944050745
LSDPRLKRPR	10	Unmodified	_LSDPRLKRPR_					0	0	0			REV__chr17:36907539-36933204|210|14.19|0.35|5.35|-|0|LHX1-DT,LHX1-DT|1	REV__chr17:36907539-36933204|210|14.19|0.35|5.35|-|0|LHX1-DT,LHX1-DT|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2487060427666	3	413.254439	1236.74149	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.55	1	104.55	104.05	105.05	0								0	0	0	0.66222	1	44149	44149		0.69767	0.07084	1		+		20563	8271	10049	10088	23662	23662					0.1325868105684549
LSDQFLYQV	9	Unmodified	_LSDQFLYQV_					0	0	0			REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	556.7870971560478	2	556.784764	1111.55498	2.5204	0.0014033	1.3607	0.00075763	3.8812	0.002161	556.7851543036962	86.32	0.32879	86.564	86.362	86.69	0.24387					21	10	4	0	0	0	0.44535	1	36092	36092		18.135	0	1	1842700	+		20564	13760	10050	10089	23663	23663					0.003660193778159737
LSDQFLYQV	9	Unmodified	_LSDQFLYQV_					0	0	0			REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	556.784764	1111.55498	2.165	0.0012055	2.2097	0.0012303	4.3748	0.0024358	556.7857303482834	86.698	0.13155	86.698	86.612	86.744	0	0.066951	0.00073996	NaN	18.135	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	578550	+		20565	13760	10050	10089							0.003660193778159737
LSDQFLYQV	9	Unmodified	_LSDQFLYQV_					0	0	0			REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	REV__ENST00000537619.6_1_12:71058148-71058262:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	556.784764	1111.55498	2.5204	0.0014033	1.3607	0.00075763	3.8812	0.002161	556.7851543036962	86.32	0.32879	86.564	86.362	86.69	0.24387	-0.066951	-0.00020547	NaN	18.135	21	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1842700	+		20566	13760	10050	10089							0.003660193778159737
LSDWPEAW	8	Unmodified	_LSDWPEAW_					0	0	0		ENST00000391411.9_1_17:21438021-21438132:-|nuORF	ENST00000391411.9_1_17:21438021-21438132:-|nuORF	ENST00000391411.9_1_17:21438021-21438132:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2296935915947	2	502.229625	1002.4447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.313	1	19.293	18.793	19.793	0.97922								0	0	0	1.0178	1	7625	7625		2.3027	0.4585	1				20567	6248	10051	10090	23664	23664					-0.05642780890570975
LSDWPEAW	8	Unmodified	_LSDWPEAW_					0	0	0		ENST00000391411.9_1_17:21438021-21438132:-|nuORF	ENST00000391411.9_1_17:21438021-21438132:-|nuORF	ENST00000391411.9_1_17:21438021-21438132:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2298156619072	2	502.229625	1002.4447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.897	1	19.345	18.845	19.845	1.448								0	0	0	1.0178	1	7437	7437		2.3027	0	1				20568	6248	10051	10090	23665	23665					-0.05642780890570975
LSEAIRLVAH	10	Unmodified	_LSEAIRLVAH_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8254882693291	2	554.827298	1107.64004	3.183	0.001766	-3.915	-0.0021722	-0.73201	-0.00040614	554.825122682568	96.683	0.12482	96.989	96.913	97.038	0.3062					6	3	2	0	0	0	0.77604	1	40670	40670		14.838	0	1	1712000	+		20569	10868	10052	10091	23666	23666					0.09052809634272307
LSEAPCQQL	9	Unmodified	_LSEAPCQQL_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	494.7818786501884	2	494.742042	987.469531	3.3712	0.0016679	1.9615	0.00097045	5.3327	0.0026383	494.74298691366835	74.227	0.33	75.545	75.438	75.768	1.318					17	10	2	0	0	0	0.073431	1	31118	31118		28.487	0	1	779180			20570	4173	10053	10092	23667	23667					-0.02470469079491977
LSEAVEHII	9	Unmodified	_LSEAVEHII_					0	0	0		tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7808105349541	2	505.779482	1009.54441	2.7303	0.0013809	0.74471	0.00037666	3.475	0.0017576	505.7796508451824	76.203	0.40794	77.97	77.782	78.19	1.7672					21	12	3	0	0	0	0.1735	1	31948	31948		36.044	5.8194	1	1601500			20571	17096	10054	10093	23668	23668					0.04002036723386482
LSEAVEHII	9	Unmodified	_LSEAVEHII_					0	0	0		tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	tr|A0A7D6ZI41|A0A7D6ZI41_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02750PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	505.779482	1009.54441	2.8396	0.0014362	0.76943	0.00038916	3.609	0.0018254	505.78001219178566	76.743	0.43757	78.037	77.825	78.262	1.2938	0.02503	-5.6576E-05	NaN	36.044	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2429700			20572	17096	10054	10093							0.04002036723386482
LSEDEGESR	9	Unmodified	_LSEDEGESR_					0	0	0		nc|ENSG00000049759|Q96PU5-3|NEDD4L;nc|ENSG00000049759|Q96PU5-2|NEDD4L;nc|ENSG00000049759|Q96PU5-5|NEDD4L;ENSG00000049759|ENST00000400345|NEDD4L	nc|ENSG00000049759|Q96PU5-3|NEDD4L	nc|ENSG00000049759|Q96PU5-3|NEDD4L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	511.2649719119072	2	511.225268	1020.43598	1.9224	0.00098278	-1.72	-0.00087931	0.20239	0.00010347	511.22416759865496	67.176	0.29794	67.176	66.99	67.288	0					14	9	2	0	0	0	0.11684	1	27924	27924		4.3292	0.73274	1	770360			20573	694	10055	10094	23669	23669					-0.07341799317691766
LSEELAIQLD	10	Unmodified	_LSEELAIQLD_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7996093630791	2	565.800611	1129.58667	0.79289	0.00044862	0.17101	9.6756E-05	0.9639	0.00054537	565.8002384676703	19.413	0.18846	20.471	20.383	20.571	1.0585					9	5	2	0	0	0	0.65659	1	8092	8092		20.415	4.2654	1	341470			20574	3088	10056	10095	23670	23670					0.027059673410803953
LSEELAIQLD	10	Unmodified	_LSEELAIQLD_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8010742068291	2	565.800611	1129.58667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.951	1	20.446	19.946	20.946	1.495								0	0	0	0.65303	1	7879	7879		11.495	0	1				20575	3088	10056	10095	23671	23671					0.027059673410803953
LSEELYQVS	9	Unmodified	_LSEELYQVS_					0	0	0			REV__ENST00000492337.5_1_3:181328352-181417456:+|nuORF	REV__ENST00000492337.5_1_3:181328352-181417456:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.2690917849541	2	534.266404	1066.51826	1.844	0.00098521	3.9953	0.0021346	5.8394	0.0031198	534.2687376278304	83.483	0.33509	85.121	84.98	85.315	1.6379					19	10	2	0	0	0	0.70108	1	35020	35020		7.2892	1.0834	1	3083600	+		20576	13439	10057	10096	23672	23672					-0.012342772387455625
LSEEPLQVL	9	Unmodified	_LSEEPLQVL_					0	0	0		ENST00000503921.5_1_5:96133011-96143586:-|nuORF;ERAP1|p.M189Rfs*26|1|0.04|ENSG00000164307|chr5:96800959-96800959|A/-|frameshift_variant;ENSG00000164307|ENST00000443439|ERAP1;nc|ENSG00000164307|Q9NZ08-2|ERAP1	ENST00000503921.5_1_5:96133011-96143586:-|nuORF	ENST00000503921.5_1_5:96133011-96143586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2894164919853	2	514.28714	1026.55973	2.7941	0.001437	0.57498	0.00029571	3.3691	0.0017327	514.2874846950403	77.23	0.51015	78.511	78.217	78.728	1.2809					39	15	3	0	0	0	0.093059	1	32366	32366		67.344	9.8725	1	4604100			20577	3771	10058	10097	23673	23673					0.04750903520562133
LSEEPLQVL	9	Unmodified	_LSEEPLQVL_					0	0	0		ENST00000503921.5_1_5:96133011-96143586:-|nuORF;ERAP1|p.M189Rfs*26|1|0.04|ENSG00000164307|chr5:96800959-96800959|A/-|frameshift_variant;ENSG00000164307|ENST00000443439|ERAP1;nc|ENSG00000164307|Q9NZ08-2|ERAP1	ENST00000503921.5_1_5:96133011-96143586:-|nuORF	ENST00000503921.5_1_5:96133011-96143586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2885619997978	2	514.28714	1026.55973	2.5176	0.0012948	-0.027013	-1.3892E-05	2.4906	0.0012809	514.2871003813146	76.725	0.51409	78.493	78.222	78.736	1.7672					40	15	3	0	0	0	0.060242	2	32189	32139;32189		81.613	3.4637	1	4415400			20578	3771	10058	10097	23674;23675	23675					0.04750903520562133
LSEHRWNL	8	Unmodified	_LSEHRWNL_					0	0	0		ENST00000491257.1_1_5:131631230-131656634:+|nuORF	ENST00000491257.1_1_5:131631230-131656634:+|nuORF	ENST00000491257.1_1_5:131631230-131656634:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7768432497978	2	527.775065	1053.53558	2.7967	0.001476	1.2852	0.00067828	4.0819	0.0021543	527.7760687007182	69.948	0.57286	71.786	71.468	72.041	1.8378					44	17	3	0	0	0	0.87106	1	29412	29412		14.582	1.0738	1	3105800			20579	6910	10059	10098	23676	23676					0.010951078775406131
LSEIDKLNL	9	Unmodified	_LSEIDKLNL_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH;ENST00000498255.6_1_13:42728006-42769963:+|nuORF	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8058349490166	2	522.800414	1043.58628	2.6289	0.0013744	4.1975	0.0021945	6.8264	0.0035688	522.8033212390628	77.22	0.28587	78.501	78.442	78.728	1.2809					13	8	2	0	0	0	0.37357	1	32420	32420		21.747	4.8044	1	1167700			20580	1398	10060	10099	23677	23677					0.06622592411895312
LSEIDKLNL	9	Unmodified	_LSEIDKLNL_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH;ENST00000498255.6_1_13:42728006-42769963:+|nuORF	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	522.800414	1043.58628	2.2648	0.001184	3.911	0.0020447	6.1758	0.0032287	523.303635174039	76.625	0.38264	78.393	78.288	78.671	1.7672	-0.054016	-0.00010907	NaN	21.747	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2758100			20581	1398	10060	10099							0.06622592411895312
LSELEAALQR	10	Unmodified	_LSELEAALQR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF;chr12:52898824-52899775|180|132.18|0.45|8.19|-|0|None,KRT8|1	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3137084841728	2	565.31422	1128.61389	0.29312	0.00016571	0.36886	0.00020852	0.66199	0.00037423	565.3143762798313	36.169	0.45269	37.446	37.17	37.623	1.2762					42	25	2	0	0	0	0.045213	3	15169	15129;15169;15214		83.429	33.874	1	3183700		+	20582	343	10061	10100	23678;23679;23680	23679					0.054724956721202034
LSELEAALQR	10	Unmodified	_LSELEAALQR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF;chr12:52898824-52899775|180|132.18|0.45|8.19|-|0|None,KRT8|1	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3134033083916	2	565.31422	1128.61389	0.79671	0.00045039	0.00065669	3.7124E-07	0.79736	0.00045076	565.3140933586754	35.552	0.25463	37.37	37.263	37.518	1.8176					25	15	2	0	0	0	0.17925	1	14912	14912		128.93	72.755	1	2694800		+	20583	343	10061	10100	23681	23681					0.054724956721202034
LSELEAALQR	10	Unmodified	_LSELEAALQR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000405771.3_1_6:134618472-134619126:-|nuORF;chr12:52898824-52899775|180|132.18|0.45|8.19|-|0|None,KRT8|1	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3146240115166	2	565.31422	1128.61389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.673	1	37.491	36.991	37.991	1.8176								0	0	0	0.033033	1	14960	14960		47.749	17.112	1			+	20584	343	10061	10100	23682	23682					0.054724956721202034
LSELKQVAI	9	Unmodified	_LSELKQVAI_					0	0	0			REV__ENSG00000105851|ENST00000496166|PIK3CG	REV__ENSG00000105851|ENST00000496166|PIK3CG	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8046142458916	2	500.8055	999.596446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.976	1	45.329	44.829	45.829	1.3536								0	0	0	0.040688	1	18438	18438		65.235	7.513	1		+		20585	9192	10062	10101	23683	23683					0.09663200137140393
LSENRRRLRRR	11	Unmodified	_LSENRRRLRRR_					0	0	0			REV__ENST00000591444.1_3_19:38145628-38145952:-|nuORF	REV__ENST00000591444.1_3_19:38145628-38145952:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	756.4572631716728	2	756.45873	1510.90291	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.17	1	102.36	101.86	102.86	0.19076								0	0	0	0.63775	1	42963	42963		2.7352	1.4057	1		+		20586	12532	10063	10102	23684	23684					0.16789243142602572
LSERWLEL	8	Unmodified	_LSERWLEL_					0	0	0		HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|43|2|sense	HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|43|2|sense	HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|43|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2865478396416	2	523.287474	1044.5604	3.4532	0.001807	-0.38329	-0.00020057	3.07	0.0016065	523.2876804271383	74.286	1.013	75.604	75.279	76.292	1.318					114	32	5	0	0	0	0.64261	1	31242	31242		36.044	0	1	53402000			20587	7634	10064	10103	23685	23685					0.03989742960266085
LSETGPVF	8	Unmodified	_LSETGPVF_					0	0	0			REV__sp|P16735|PORTL_HCMVAPortalproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL104PE=1SV=2	REV__sp|P16735|PORTL_HCMVAPortalproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL104PE=1SV=2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	425.7520324587822	2	425.221268	848.427984	0.7775	0.00033061	0.89372	0.00038003	1.6712	0.00071064	425.22143315541643	70.492	0.47693	70.492	70.21	70.687	0					44	15	5	0	0	0	2.3239	1	29289	29289		5.7604	2.8712	1	8864700	+		20588	14639	10065	10104	23686	23686					-0.002292817765237487
LSEWCHPV	8	Unmodified	_LSEWCHPV_					0	0	0			REV__ENST00000467199.5_1_7:2279258-2279327:-|nuORF	REV__ENST00000467199.5_1_7:2279258-2279327:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7268554568291	2	485.726195	969.437837	2.8241	0.0013717	-2.1766	-0.0010572	0.64754	0.00031453	485.7251320541358	59.64	0.42174	61.609	61.405	61.826	1.969					38	13	4	0	0	0	0.86202	1	25097	25097		15.768	1.1865	1	5419700	+		20589	13243	10066	10105	23687	23687					-0.048104170427905046
LSEWQKNF	8	Unmodified	_LSEWQKNF_					0	0	0		FIGNL1|p.Y18F|1|0.27|ENSG00000132436|chr7:50447235-50447235|T/A|missense_variant	FIGNL1|p.Y18F|1|0.27|ENSG00000132436|chr7:50447235-50447235|T/A|missense_variant	FIGNL1|p.Y18F|1|0.27|ENSG00000132436|chr7:50447235-50447235|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2637206912041	2	526.263999	1050.51345	1.4644	0.00077066	0.72015	0.00037899	2.1845	0.0011496	526.264061566248	57.063	0.26772	58.477	58.369	58.637	1.4145					13	8	2	0	0	0	0.83518	1	23979	23979		18.135	2.2878	1	1600600			20590	7582	10067	10106	23688	23688					-0.0097911659086094
LSFADRFD	8	Unmodified	_LSFADRFD_					0	0	0			REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	REV__ENST00000446228.5_1_2:162758621-162834241:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.7365295290947	2	485.735074	969.455596	1.4847	0.00072117	0.97673	0.00047443	2.4614	0.0011956	485.7351375339094	34.522	0.34189	34.522	34.37	34.711	0					20	10	3	0	0	0	0.84871	1	14472	14472		16.942	1.0951	1	1158900	+		20591	10241	10068	10107	23689	23689					-0.03035378516290166
LSFETYLCI	9	Unmodified	_LSFETYLCI_					0	0	0			REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2692748904228	2	544.770268	1087.52598	2.876	0.0015668	1.3671	0.00074475	4.2431	0.0023115	544.7743842871917	74.926	0.85915	76.232	75.756	76.615	1.3063					78	27	5	0	0	0	0.44535	1	31352	31352		18.135	1.1927	1	11432000	+		20592	14176	10069	10108	23690	23690					-0.014278412428666343
LSFEVTVDR	9	Unmodified	_LSFEVTVDR_					0	0	0			REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1916381716728	2	533.282389	1064.55022	1.6505	0.0008802	1.1788	0.00062864	2.8293	0.0015088	533.2821293194603	71.594	0.28648	71.594	71.446	71.732	0					16	8	3	0	0	0	0.11776	1	29772	29772		3.2813	0	1	1162400	+		20593	11658	10070	10109	23691	23691					0.020531352350417365
LSFEVTVDR	9	Unmodified	_LSFEVTVDR_					0	0	0			REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	533.282389	1064.55022	2.859	0.0015247	-1.6977	-0.00090534	1.1614	0.00061934	533.2811711700925	70.073	0.50006	71.426	71.116	71.616	1.3536	-0.041202	-0.0015154	NaN	3.2813	37	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4606300	+		20594	11658	10070	10109							0.020531352350417365
LSFEVTVDR	9	Unmodified	_LSFEVTVDR_					0	0	0			REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	REV__nc|ENSG00000197134|Q9Y2Q1-4|ZNF257	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	533.282389	1064.55022	2.6226	0.0013986	-1.2645	-0.00067432	1.3582	0.00072428	533.2814199053734	69.582	0.47183	71.435	71.136	71.608	1.853	-0.03231	-0.0010534	NaN	3.2813	33	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5213600	+		20595	11658	10070	10109							0.020531352350417365
LSFFFFFLIFF	11	Unmodified	_LSFFFFFLIFF_					0	0	0		ENST00000437176.5_1_14:75936668-75936947:+|nuORF	ENST00000437176.5_1_14:75936668-75936947:+|nuORF	ENST00000437176.5_1_14:75936668-75936947:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.8188659548759	3	492.265171	1473.77368	1.7731	0.00087286	3.2641	0.0016068	5.0373	0.0024797	492.601033825941	54.301	0.25247	55.706	55.582	55.835	1.4048					10	7	2	0	0	0	0.14606	1	22748	22748		5.0475	0.64137	1	526610			20596	6536	10071	10110	23692	23692					0.05574655687246377
LSFFGEDR	8	Unmodified	_LSFFGEDR_					0	0	0		ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.7360412478447	2	485.735074	969.455596	2.0949	0.0010176	0.12835	6.2344E-05	2.2233	0.0010799	485.7350916210377	34.066	0.33433	34.363	34.177	34.511	0.29701					17	10	2	0	0	0	0.83518	1	14326	14326		18.135	0	1	556560			20597	5913	10072	10111	23693	23693					-0.030353785162787972
LSFFGEDR	8	Unmodified	_LSFFGEDR_					0	0	0		ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	485.735074	969.455596	1.4847	0.00072117	0.97673	0.00047443	2.4614	0.0011956	485.7351375339094	34.522	0.34189	34.522	34.37	34.711	0	0.15939	0.00058031	NaN	18.135	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1158900			20598	5913	10072	10111							-0.030353785162787972
LSFFGEDR	8	Unmodified	_LSFFGEDR_					0	0	0		ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	ENST00000335997.11_1_X:129200182-129200299:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	485.735074	969.455596	0.78954	0.00038351	-0.040828	-1.9832E-05	0.74871	0.00036368	485.73431550303394	32.378	0.21076	34.202	34.124	34.335	1.8246	-0.16005	-0.00040821	NaN	18.135	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	270330			20599	5913	10072	10111							-0.030353785162787972
LSFGSVCFFF	10	Unmodified	_LSFGSVCFFF_					0	0	0			REV__ENST00000464307.5_1_11:64373954-64374221:-|nuORF	REV__ENST00000464307.5_1_11:64373954-64374221:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	576.8026000857353	2	577.272978	1152.5314	2.4958	0.0014408	-3.7778	-0.0021808	-1.2819	-0.00074003	577.7717312986931	64.043	0.19142	65.45	65.368	65.56	1.4071					9	5	2	0	0	0	0.1245	1	26828	26828		15.847	1.0089	1	678510	+		20600	13222	10073	10112	23694	23694					-0.03876117660365708
LSFIAFYSV	9	Unmodified	_LSFIAFYSV_					0	0	0		ENST00000393480.3_1_7:116140843-116140951:+|nuORF	ENST00000393480.3_1_7:116140843-116140951:+|nuORF	ENST00000393480.3_1_7:116140843-116140951:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.7814208865166	2	523.781493	1045.54843	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.037	1	93.205	92.705	93.705	0.16835								0	0	0	0.3709	1	38955	38955		11.64	3.7301	1				20601	6271	10074	10113	23695	23695					0.027481262170795162
LSFLGVTGPV	10	Unmodified	_LSFLGVTGPV_					0	0	0		tr|A0A553SQA8|A0A553SQA8_NIACITransglycosylaseSLTdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24400PE=4SV=1	tr|A0A553SQA8|A0A553SQA8_NIACITransglycosylaseSLTdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24400PE=4SV=1	tr|A0A553SQA8|A0A553SQA8_NIACITransglycosylaseSLTdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24400PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2881652712822	2	495.286943	988.559333	1.6229	0.00080382	2.2007	0.00109	3.8236	0.0018938	495.2882129550225	54.728	0.45373	56.133	55.931	56.385	1.4048					37	14	3	0	0	0	0.44465	1	22965	22965		30.637	0.79596	1	6387600			20602	16508	10075	10114	23696	23696					0.0645952859136969
LSFLKLIKL	9	Unmodified	_LSFLKLIKL_					0	0	0			REV__ENST00000263904.4_1_2:152976975-152977068:-|nuORF	REV__ENST00000263904.4_1_2:152976975-152977068:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1075.232348620892	1	1074.72853	1073.72125	1.6604	0.0017845	-0.29948	-0.00032186	1.3609	0.0014626	1075.727871107903	37.632	0.25795	37.632	37.494	37.752	0					13	8	2	0	0	0	0.11916	1	15731	15731		1.8442	0	1	1460300	+		20603	12206	10076	10115	23697	23697					0.18734117344297374
LSFLKLIKL	9	Unmodified	_LSFLKLIKL_					0	0	0			REV__ENST00000263904.4_1_2:152976975-152977068:-|nuORF	REV__ENST00000263904.4_1_2:152976975-152977068:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1074.72853	1073.72125	1.1023	0.0011846	1.1492	0.0012351	2.2515	0.0024197	1075.7344144858648	36.143	0.10455	37.961	37.871	37.976	1.8176	0.16468	0.0007399	NaN	1.8442	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	968070	+		20604	12206	10076	10115							0.18734117344297374
LSFLKSLLS	9	Unmodified	_LSFLKSLLS_					0	0	0		nc|ENSG00000290691|A6NGW2|STRCP1;ENSG00000242866|ENST00000450892|STRC	nc|ENSG00000290691|A6NGW2|STRCP1	nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3141662478447	2	504.310418	1006.60628	3.3279	0.0016783	4.3381	0.0021878	7.6661	0.0038661	504.3129000783489	64.656	0.46063	66.063	65.833	66.293	1.4071					32	14	3	0	0	0	0.079895	1	27137	27137		56.177	0.6743	1	4555200			20605	5349	10077	10116	23698	23698					0.10324388142510088
LSFNVPFSF	9	Unmodified	_LSFNVPFSF_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2687255740166	2	529.271293	1056.52803	0.17272	9.1417E-05	-3.0419	-0.00161	-2.8692	-0.0015186	529.2695574125715	51.155	0.46187	53.13	52.967	53.429	1.9753					40	18	3	0	0	0	0.30098	1	21511	21511		25.399	2.663	1	8433800	+		20606	8499	10078	10117	23699	23699					0.002029555572789832
LSFPCSLKI	9	Unmodified	_LSFPCSLKI_					0	0	0		ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2856628298759	2	504.283346	1006.55214	1.958	0.00098737	2.2674	0.0011434	4.2254	0.0021308	504.2850509676947	64.82	0.48085	64.82	64.527	65.008	0					36	14	3	0	0	0	0.42305	1	27070	27070		19.257	5.3509	1	930970			20607	5146	10079	10118	23700	23700					0.049124727192975115
LSFPCSLKI	9	Unmodified	_LSFPCSLKI_					0	0	0		ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	ENSG00000204518|ENST00000376221|AADACL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2863952517509	2	504.283346	1006.55214	2.8237	0.001424	2.2224	0.0011207	5.0461	0.0025447	504.7860840901569	62.466	0.3725	64.415	64.229	64.601	1.9492					36	11	4	0	0	0	0.15635	1	26199	26199		37.974	8.8924	1	3827300			20608	5146	10079	10118	23701	23701					0.049124727192975115
LSFPSGLAVV	10	Unmodified	_LSFPSGLAVV_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2878295779228	2	495.286943	988.559333	2.7929	0.0013833	-1.0306	-0.00051043	1.7624	0.00087287	495.28638282186745	55.977	0.48167	56.298	56.078	56.56	0.32088					39	16	3	0	0	0	0.6819	1	23372	23372		19.257	0	1	4417900	+		20609	10951	10080	10119	23702	23702					0.06459528591381059
LSFPSGLAVV	10	Unmodified	_LSFPSGLAVV_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2690612673759	2	495.286943	988.559333	1.6229	0.00080382	2.2007	0.00109	3.8236	0.0018938	495.2882129550225	54.728	0.45373	56.133	55.931	56.385	1.4048					37	14	3	0	0	0	0.44465	1	22839	22839		30.637	0	1	6387600	+		20610	10951	10080	10119	23703	23703					0.06459528591381059
LSFPSGLAVV	10	Unmodified	_LSFPSGLAVV_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2883178591728	2	495.286943	988.559333	1.9101	0.00094604	2.7813	0.0013776	4.6914	0.0023236	495.2883912689095	54.212	0.49672	56.18	55.97	56.467	1.9684					35	15	3	0	0	0	0.44465	1	22653	22653		30.637	0	1	5783700	+		20611	10951	10080	10119	23704	23704					0.06459528591381059
LSFPYSYEV	9	Unmodified	_LSFPYSYEV_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant;nc|ENSG00000075420|Q53EP0-2|FNDC3B;ENST00000469491.5_1_3:171830269-172055226:+|nuORF	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.528369128704	1	1104.5248	1103.51753	1.4436	0.0015944	-1.5942	-0.0017608	-0.1506	-0.00016634	1104.521741502179	67.135	0.3973	68.524	68.279	68.676	1.3887					22	12	2	0	0	0	0.15635	2	28127	28127;28179		37.974	18.717	1	1704100			20612	932	10081	10120	23705;23706	23705					-0.030090718878227563
LSFPYSYEV	9	Unmodified	_LSFPYSYEV_					0	0	0		ENSG00000075420|ENST00000415807|FNDC3B;FNDC3B|p.D417*|1|0.11|ENSG00000075420|chr3:172310875-172310876|-/T|frameshift_variant;nc|ENSG00000075420|Q53EP0-2|FNDC3B;ENST00000469491.5_1_3:171830269-172055226:+|nuORF	ENSG00000075420|ENST00000415807|FNDC3B	ENSG00000075420|ENST00000415807|FNDC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1104.525439441204	1	1104.5248	1103.51753	1.5435	0.0017049	-3.3066	-0.0036522	-1.763	-0.0019473	1104.518226710964	66.701	0.48766	68.59	68.404	68.892	1.8889					21	15	2	0	0	0	0.19075	1	27985	27985		34.102	13.649	1	1646900			20613	932	10081	10120	23707	23707					-0.030090718878227563
LSFQWLFRI	9	Unmodified	_LSFQWLFRI_					0	0	0		nc|ENSG00000059122|Q4VC44-3|FLYWCH1;ENST00000575604.1_1_16:2983808-2987136:+|nuORF	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3430053591728	2	605.342584	1208.67061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.616	1	84.804	84.304	85.304	1.1879								0	0	0	0.40883	1	35093	35093		7.9102	0	1				20614	7823	10082	10121	23708	23708					0.07462588019325267
LSFSDLLSL	9	Unmodified	_LSFSDLLSL_					0	0	0		tr|A0A7D6VR75|A0A7D6VR75_9CLOTS8familyserinepeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23735PE=3SV=1	tr|A0A7D6VR75|A0A7D6VR75_9CLOTS8familyserinepeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23735PE=3SV=1	tr|A0A7D6VR75|A0A7D6VR75_9CLOTS8familyserinepeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23735PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5590087771416	1	994.545539	993.538263	4.2488	0.0042257	3.3255	0.0033074	7.5744	0.0075331	994.5510858014783	74.945	0.4965	76.251	76.028	76.524	1.3063					27	15	3	0	0	0	0.20671	1	31508	31508		32.305	3.8186	1	2956700			20615	16822	10083	10122	23709	23709					0.04123518491860523
LSFSWVLL	8	Unmodified	_LSFSWVLL_					0	0	0		ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7762939333916	2	482.778754	963.542954	0.79773	0.00038513	-4.2857	-0.002069	-3.4879	-0.0016839	482.7765442921441	55.908	0.18464	57.877	57.749	57.933	1.9684					8	5	2	0	0	0	0.55531	1	23447	23447		53.576	11.62	1	1310200			20616	2025	10084	10123	23710	23710					0.05972447425290284
LSFYPLLSF	9	Unmodified	_LSFYPLLSF_					0	0	0		ENST00000416382.6_1_10:11375127-11375370:+|nuORF	ENST00000416382.6_1_10:11375127-11375370:+|nuORF	ENST00000416382.6_1_10:11375127-11375370:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7965576052666	2	543.797143	1085.57973	2.1023	0.0011432	-3.604	-0.0019598	-1.5016	-0.00081659	543.7946638633065	41.594	0.41295	42.919	42.683	43.096	1.3254					29	12	3	0	0	0	0.27148	1	17463	17463		26.884	1.4843	1	2156200			20617	6409	10085	10124	23711	23711					0.04036699251173559
LSFYPLLSF	9	Unmodified	_LSFYPLLSF_					0	0	0		ENST00000416382.6_1_10:11375127-11375370:+|nuORF	ENST00000416382.6_1_10:11375127-11375370:+|nuORF	ENST00000416382.6_1_10:11375127-11375370:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7950317263603	2	543.797143	1085.57973	1.9813	0.0010774	-4.231	-0.0023008	-2.2497	-0.0012234	543.7940812186476	41.144	0.4053	43.037	42.864	43.269	1.8927					27	12	3	0	0	0	0.37357	1	17277	17277		21.747	3.6003	1	2294300			20618	6409	10085	10124	23712	23712					0.04036699251173559
LSGEFSLSTR	10	Unmodified	_LSGEFSLSTR_					0	0	0			REV__chr3:9801750-9803843|105|15.69|0.0|20.58|+|1|None,ARPC4-TTLL3|1	REV__chr3:9801750-9803843|105|15.69|0.0|20.58|+|1|None,ARPC4-TTLL3|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	548.3271362185478	2	548.785296	1095.55604	1.5275	0.00083825	-3.8522	-0.002114	-2.3247	-0.0012758	548.7829023318969	75.517	0.34941	75.517	75.311	75.66	0					17	10	2	0	0	0	0.12424	1	31470	31470		20.415	0	1	745390	+		20619	8321	10086	10125	23713	23713					0.012082337467063553
LSGGRLFAVL	10	Unmodified	_LSGGRLFAVL_					0	0	0			REV__ENST00000492037.5_1_17:37785754-37792115:+|nuORF	REV__ENST00000492037.5_1_17:37785754-37792115:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.6230956912041	2	516.813659	1031.61277	2.0147	0.0010412	3.1444	0.001625	5.1591	0.0026663	516.8140126690629	46.528	0.40264	47.903	47.712	48.115	1.3751					27	12	3	0	0	0	0.12333	1	19535	19535		24.021	3.5669	1	5152000	+		20620	13435	10087	10126	23714	23714					0.09822326093899392
LSGIGSTFSV	10	Unmodified	_LSGIGSTFSV_					0	0	0			REV__tr|A0A553SR00|A0A553SR00_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_00010PE=4SV=1	REV__tr|A0A553SR00|A0A553SR00_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_00010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.2570373415947	2	484.258382	966.502212	2.2639	0.0010963	-3.0452	-0.0014747	-0.78127	-0.00037834	484.2569033256404	61.374	0.31676	61.374	61.203	61.52	0					19	9	3	0	0	0	0.35292	1	25562	25562		36.127	3.3413	1	1735900	+		20621	15141	10088	10127	23715	23715					0.017620613150143072
LSGLGTGEH	9	Unmodified	_LSGLGTGEH_					0	0	0		ENST00000523903.5_1_17:39991516-39992234:-|nuORF	ENST00000523903.5_1_17:39991516-39992234:-|nuORF	ENST00000523903.5_1_17:39991516-39992234:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7194091677666	2	435.719424	869.424296	0.18252	7.9529E-05	0.082692	3.603E-05	0.26521	0.00011556	435.7194866716216	13.948	0.21514	14.674	14.535	14.75	0.72639					18	6	3	0	0	0	0.24063	1	5821	5821		28.487	0	1	14858000			20622	7106	10089	10128	23716	23716					-0.015639515503721668
LSGLLHQSL	9	Unmodified	_LSGLLHQSL_					0	0	0			REV__ENST00000324015.7_1_17:1657834-1658029:+|nuORF	REV__ENST00000324015.7_1_17:1657834-1658029:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2836486697197	2	484.282192	966.549831	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.521	1	48.903	48.403	49.403	1.3825								0	0	0	0.40883	1	19894	19894		7.9102	0	1		+		20623	12421	10090	10129	23717	23717					0.06521760305861335
LSGLVHERVKQ	11	Unmodified	_LSGLVHERVKQ_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3701049685478	2	633.369861	1264.72517	2.0542	0.001301	-1.948	-0.0012338	0.10613	6.7217E-05	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	1.037	1	32992	32992		1.0715	0.5467	1	2722600	+		20624	14480	10091	10130	23718	23718					0.1033955510006308
LSGLVHERVKQ	11	Unmodified	_LSGLVHERVKQ_					0	0	0			REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	REV__nc|ENSG00000166473|Q7Z442-2|PKD1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3699218630791	2	633.369861	1264.72517	2.3357	0.0014794	-1.9062	-0.0012073	0.42956	0.00027207	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	1.037	1	34225	34225		1.0715	0.61312	1	11549000	+		20625	14480	10091	10130	23719	23719					0.1033955510006308
LSGPGQLPWA	10	Unmodified	_LSGPGQLPWA_					0	0	0		ENST00000589179.5_1_12:53590773-53591061:-|nuORF	ENST00000589179.5_1_12:53590773-53591061:-|nuORF	ENST00000589179.5_1_12:53590773-53591061:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.8077270388603	2	513.274367	1024.53418	1.4917	0.00076563	1.0647	0.00054648	2.5564	0.0013121	513.275436498022	80.178	0.41709	81.895	81.663	82.08	1.7167					20	13	2	0	0	0	0.12484	1	33587	33587		7.2892	2.5332	1	1215000			20626	7471	10092	10131	23720	23720					0.02289473788800933
LSGPPFVP	8	Unmodified	_LSGPPFVP_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	407.2291747927666	2	407.228897	812.44324	0.26712	0.00010878	1.5735	0.00064076	1.8406	0.00074954	407.22930647675827	18.747	0.278	20.195	20.025	20.303	1.448					12	8	2	0	0	0	0.88958	1	7805	7805		2.8892	0.31174	1	333650	+		20627	8693	10093	10132	23721	23721					0.029516298113321682
LSGPVLQKCH	10	Unmodified	_LSGPVLQKCH_					0	0	0		FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.2955200076103	2	541.294776	1080.575	2.7589	0.0014934	-0.83408	-0.00045148	1.9249	0.0010419	541.2940036640421	98.151	0.073784	98.242	98.213	98.286	0.090889					6	3	2	0	0	0	0.88314	1	41077	41077		3.2813	0.28607	1	5695700			20628	7581	10094	10133	23722	23722					0.03793491836790963
LSGPVLQKCH	10	Unmodified	_LSGPVLQKCH_					0	0	0		FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	FDXACB1|p.F377L|1|0.38|ENSG00000255561|chr11:111875666-111875666|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.294776	1080.575	3.3161	0.001795	0.70592	0.00038211	4.0221	0.0021771	541.2950468723756	97.944	0.081329	98.201	98.137	98.218	0.25636	-0.020716	0.00069959	NaN	3.2813	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2027700			20629	7581	10094	10133							0.03793491836790963
LSGTSSTIPVF	11	Unmodified	_LSGTSSTIPVF_					0	0	0			REV__ENST00000554972.1_1_14:76349147-76373016:+|nuORF	REV__ENST00000554972.1_1_14:76349147-76373016:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.1326171755791	2	554.797872	1107.58119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.102	1	96.504	96.004	97.004	0.40208								0	0	0	0.63768	1	40428	40428		13.906	0.39817	1		+		20630	13863	10095	10134	23723	23723					0.0317028854929049
LSGVLSIGAI	10	Unmodified	_LSGVLSIGAI_					0	0	0		tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2877380251884	2	465.286943	928.559333	2.1585	0.0010043	-0.31871	-0.00014829	1.8398	0.00085602	465.28683369647035	65.178	0.98827	65.178	64.881	65.87	0					86	30	5	0	0	0	0.076926	1	27205	27205		68.081	4.1202	1	63578000			20631	16882	10096	10135	23724	23724					0.09219528591370363
LSGVLSIGAI	10	Unmodified	_LSGVLSIGAI_					0	0	0		tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2892028689384	2	465.286943	928.559333	2.5746	0.0011979	-0.15229	-7.0857E-05	2.4223	0.0011271	465.28734429829257	63.537	1.1502	64.95	64.596	65.746	1.4134					104	36	5	0	0	0	0.32206	1	26802	26802		37.974	1.847	1	231860000			20632	16882	10096	10135	23725	23725					0.09219528591370363
LSGVLSIGAI	10	Unmodified	_LSGVLSIGAI_					0	0	0		tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	tr|A0A7D6VSR5|A0A7D6VSR5_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07950PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2885925173759	2	465.286943	928.559333	2.6075	0.0012132	-0.54231	-0.00025233	2.0652	0.00096091	465.28707194913125	62.915	1.0932	64.86	64.597	65.69	1.9444					95	34	5	0	0	0	0.44465	1	26592	26592		30.637	1.555	1	196070000			20633	16882	10096	10135	23726	23726					0.09219528591370363
LSHAPFWEL	9	Unmodified	_LSHAPFWEL_					0	0	0			REV__ENST00000550730.1_1_12:57024629-57030521:-|nuORF	REV__ENST00000550730.1_1_12:57024629-57030521:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2190429568291	2	550.282192	1098.54983	1.8642	0.0010258	-0.11953	-6.5774E-05	1.7447	0.00096007	550.280559615296	40.082	0.40628	41.944	41.707	42.114	1.8624					23	12	3	0	0	0	0.11812	1	16798	16798		4.756	0	1	969240	+		20634	13829	10097	10136	23727	23727					0.004497603058553068
LSHHFVFV	8	Unmodified	_LSHHFVFV_					0	0	0			REV__nc|ENSG00000172468|Q96LI6-3|HSFY1	REV__nc|ENSG00000172468|Q96LI6-3|HSFY1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	493.3074523806572	2	493.266345	984.518136	1.5807	0.00077969	3.7157	0.0018328	5.2964	0.0026125	493.26856071307134	80.351	0.43899	80.351	80.102	80.541	0					20	13	2	0	0	0	2.3239	1	33374	33374		2.5775	0	1	364010	+		20635	14491	10098	10137	23728	23728					0.025258123425601298
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	710.8452636599541	2	710.840799	1419.66705	2.1465	0.0015258	2.1144	0.001503	4.261	0.0030289	710.8423331927124	47.006	1.0867	47.006	46.785	47.872	0					89	34	4	0	0	0	0.66268	4	19725	19598;19725;19769;19824		19.362	0	1	10300000	+		20636	11498	10099	10138	23729;23730;23731;23732	23730					-0.02600171335870982
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	710.8421508669853	2	710.840799	1419.66705	1.7054	0.0012123	1.983	0.0014096	3.6884	0.0026219	710.8421584213337	46.514	0.5507	46.843	46.681	47.232	0.3295					50	18	4	0	0	0	0.62604	2	19563	19473;19563		20.415	0	1	2555400	+		20637	11498	10099	10138	23733;23734	23734					-0.02600171335870982
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.8441039919853	2	710.840799	1419.66705	2.0565	0.0014618	1.8936	0.001346	3.9501	0.0028079	710.842701880105	45.08	0.32025	46.445	46.21	46.53	1.3653					26	9	4	0	0	0	0.80586	2	18851	18851;18903		15.248	0	1	1638300	+		20638	11498	10099	10138	23735;23736	23735					-0.02600171335870982
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.8416625857353	2	710.840799	1419.66705	1.4782	0.0010507	2.4093	0.0017126	3.8875	0.0027634	710.8424005849404	44.449	0.32105	46.408	46.255	46.576	1.9596					19	9	3	0	0	0	0.87205	1	18638	18638		11.495	0	1	815580	+		20639	11498	10099	10138	23737	23737					-0.02600171335870982
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	710.840799	1419.66705	2.0565	0.0014618	1.8936	0.001346	3.9501	0.0028079	710.842701880105	45.08	0.32025	46.445	46.21	46.53	1.3653	0.018352	-0.00023562	NaN	15.248	26	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1638300	+		20640	11498	10099	10138							-0.02600171335870982
LSHKDYEEITW	11	Unmodified	_LSHKDYEEITW_					0	0	0			REV__ENSG00000186367|ENST00000564719|MINAR2	REV__ENSG00000186367|ENST00000564719|MINAR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	710.840799	1419.66705	1.4782	0.0010507	2.4093	0.0017126	3.8875	0.0027634	710.8424005849404	44.449	0.32105	46.408	46.255	46.576	1.9596	-0.018352	0.00049758	NaN	15.248	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	815580	+		20641	11498	10099	10138							-0.02600171335870982
LSHSESCPN	9	Unmodified	_LSHSESCPN_					0	0	0			REV__nc|ENSG00000176024|Q6PF04-2|ZNF613	REV__nc|ENSG00000176024|Q6PF04-2|ZNF613	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2103149294853	2	487.205824	972.397095	1.442	0.00070255	2.5785	0.0012563	4.0205	0.0019588	487.2065940005841	66.622	0.7707	68.511	68.278	69.048	1.8889					46	24	2	0	0	0	0.59203	1	27918	27918		11.64	0	1	3037200	+		20642	11169	10100	10139	23738	23738					-0.0902080315307785
LSHSFVLVV	9	Unmodified	_LSHSFVLVV_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|291|2|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|291|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7957641482353	2	500.794935	999.575317	1.7885	0.00089569	0.76601	0.00038362	2.5546	0.0012793	500.79509137628577	54.306	0.47872	55.71	55.485	55.964	1.4048					31	14	3	0	0	0	0.059546	1	22741	22741		64.236	13.381	1	3449600	+		20643	14326	10101	10140	23739	23739					0.07551234828292763
LSHSFVLVV	9	Unmodified	_LSHSFVLVV_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|291|2|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|291|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7955810427666	2	500.794935	999.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.721	1	55.691	55.191	56.191	1.9697								0	0	0	0.072365	1	22507	22507		39.957	1.8061	1		+		20644	14326	10101	10140	23740	23740					0.07551234828292763
LSHVALFRVL	10	Unmodified	_LSHVALFRVL_					0	0	0		ENST00000526352.5_1_11:6621466-6622302:-|nuORF	ENST00000526352.5_1_11:6621466-6622302:-|nuORF	ENST00000526352.5_1_11:6621466-6622302:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8559448122978	2	577.855858	1153.69716	3.0207	0.0017455	-0.79581	-0.00045987	2.2249	0.0012857	577.854960750171	64.714	0.33987	66.121	65.923	66.263	1.4071					25	10	3	0	0	0	0.72878	1	27110	27110		17.113	1.3743	1	3855200			20645	7124	10102	10141	23741	23741					0.12646276910641063
LSHYKRALVLI	11	Unmodified	_LSHYKRALVLI_					0	0	0			REV__ENST00000512791.1_1_4:145629335-145636520:+|nuORF	REV__ENST00000512791.1_1_4:145629335-145636520:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.9048339724541	2	656.908622	1311.80269	3.2055	0.0021057	-2.008	-0.0013191	1.1975	0.00078667	656.9071972574906	95.151	0.31767	95.553	95.363	95.681	0.40208					21	13	2	0	0	0	1.0224	1	40026	40026		2.7352	1.4057	1	5397600	+		20646	13583	10103	10142	23742	23742					0.15926193036261793
LSIAHKVRML	10	Unmodified	_LSIAHKVRML_					0	0	0			REV__tr|A0A7D6VQ47|A0A7D6VQ47_9CLOTPeptidaseM20domain-containingprotein2OS=ClostridiumintestinaleOX=36845GN=HZF06_21540PE=3SV=1	REV__tr|A0A7D6VQ47|A0A7D6VQ47_9CLOTPeptidaseM20domain-containingprotein2OS=ClostridiumintestinaleOX=36845GN=HZF06_21540PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3583862185478	2	584.355168	1166.69578	3.3962	0.0019846	1.5396	0.00089968	4.9358	0.0028843	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.89646	1	31365	31365		1.8442	1.8442	1	5910500	+		20647	15373	10104	10143	23743	23743					0.1191031955024755
LSIALSSTFL	10	Unmodified	_LSIALSSTFL_					0	0	0			REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	REV__nc|ENSG00000174514|Q8N468-2|MFSD4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3043701052666	2	526.305332	1050.59611	3.3679	0.0017726	-2.6825	-0.0014118	0.68545	0.00036076	526.3044215547418	81.293	0.40174	82.989	82.735	83.136	1.6959					17	12	2	0	0	0	0.5476	1	34132	34132		25.399	0	1	1224200	+		20648	11125	10105	10144	23744	23744					0.07283780417265007
LSIDDFYINYK	11	Unmodified	_LSIDDFYINYK_					0	0	0		tr|A0A553SJ75|A0A553SJ75_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16225PE=4SV=1	tr|A0A553SJ75|A0A553SJ75_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16225PE=4SV=1	tr|A0A553SJ75|A0A553SJ75_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16225PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	695.8456298708916	2	695.848093	1389.68163	1.399	0.00097352	-2.0731	-0.0014426	-0.67407	-0.00046905	695.8465840220497	28.157	0.24874	28.157	28.038	28.287	0					13	7	2	0	0	0	0.84637	1	11788	11788		13.042	0	1	2238900			20649	16232	10106	10145	23745	23745					0.00237900812294356
LSIDDHEQ	8	Unmodified	_LSIDDHEQ_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7206298708916	2	478.719621	955.42469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.243	1	80.978	80.478	81.478	1.735								0	0	0	1.0178	1	33235	33235		26.884	5.137	1		+		20650	10075	10107	10146	23746	23746					-0.05480576621187083
LSIKRMRKPKR	11	Unmodified	_LSIKRMRKPKR_					0	0	0			REV__ENST00000312239.9_1_1:21100065-21103180:-|nuORF	REV__ENST00000312239.9_1_1:21100065-21103180:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	706.9541503787041	2	706.953372	1411.89219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.563	1	24.212	23.712	24.712	1.6487								0	0	0	0.63775	1	9416	9416		1.1933	0.79263	1		+		20651	12371	10108	10147	23747	23747					0.2027212444397719
LSIPRIFH	8	Unmodified	_LSIPRIFH_					0	0	0		nc|ENSG00000160563|Q6P2C8-4|MED27	nc|ENSG00000160563|Q6P2C8-4|MED27	nc|ENSG00000160563|Q6P2C8-4|MED27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7968017458916	2	491.795269	981.575986	0.65487	0.00032206	1.7203	0.00084602	2.3751	0.0011681	491.7957261214561	32.11	0.38503	33.391	33.202	33.587	1.2813					27	13	3	0	0	0	0.88055	1	13428	13428		8.5933	3.3626	1	4557600			20652	7903	10109	10148	23748	23748					0.08446074267988024
LSIPRIFH	8	Unmodified	_LSIPRIFH_					0	0	0		nc|ENSG00000160563|Q6P2C8-4|MED27	nc|ENSG00000160563|Q6P2C8-4|MED27	nc|ENSG00000160563|Q6P2C8-4|MED27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7968017458916	2	491.795269	981.575986	0.99066	0.0004872	1.3367	0.00065739	2.3274	0.0011446	491.7956159473475	31.524	0.35549	33.349	33.155	33.51	1.8246					23	12	3	0	0	0	0.88663	1	13169	13169		4.756	2.1785	1	3409100			20653	7903	10109	10148	23749	23749					0.08446074267988024
LSIPRRRPAR	10	Unmodified	_LSIPRRRPAR_					0	0	0			REV__ENST00000530167.1_1_11:118964664-118964913:-|nuORF	REV__ENST00000530167.1_1_11:118964664-118964913:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	407.9240600466728	3	407.926545	1220.75781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.312	1	47.642	47.142	48.142	0.33034								0	0	0	0.6617	1	19845	19845		1.5923	0.37745	1		+		20654	13699	10110	10149	23750	23750					0.1562580701358911
LSISQEVHI	9	Unmodified	_LSISQEVHI_					0	0	0			REV__nc|ENSG00000134769|Q9Y4J8-4|DTNA	REV__nc|ENSG00000134769|Q9Y4J8-4|DTNA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2890502810478	2	513.284931	1024.55531	2.2734	0.0011669	0.18329	9.4083E-05	2.4567	0.001261	513.2849915157923	49.141	0.47341	49.141	48.842	49.316	0					35	14	3	0	0	0	0.15635	1	20439	20439		37.974	1.847	1	3310300	+		20655	9917	10111	10150	23751	23751					0.04401439097682669
LSITETTKKT	10	Unmodified	_LSITETTKKT_					0	0	0		tr|A0A553SP65|A0A553SP65_NIACIStk1familyPASTAdomain-containingSer/ThrkinaseOS=NialliacirculansOX=1397GN=pknBPE=4SV=1	tr|A0A553SP65|A0A553SP65_NIACIStk1familyPASTAdomain-containingSer/ThrkinaseOS=NialliacirculansOX=1397GN=pknBPE=4SV=1	tr|A0A553SP65|A0A553SP65_NIACIStk1familyPASTAdomain-containingSer/ThrkinaseOS=NialliacirculansOX=1397GN=pknBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3247558474541	2	561.324254	1120.63395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.687	1	36.989	36.489	37.489	0.30197								0	0	0	0.65836	1	15428	15428		6.7232	2.7788	1				20656	16453	10112	10151	23752	23752					0.07846246612075447
LSITRLIKKYR	11	Unmodified	_LSITRLIKKYR_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.3025695681572	3	464.301278	1389.882	3.5556	0.0016509	-1.3636	-0.00063312	2.192	0.0010177	464.3007151886126	96.25	0.21309	96.652	96.577	96.79	0.40208					16	6	4	0	0	0	1.039	1	40488	40488		0.45452	0.046251	1	4738600			20657	1421	10113	10152	23753	23753					0.20265839990406675
LSIWQQKR	8	Unmodified	_LSIWQQKR_					0	0	0		ENST00000547306.5_1_12:49397039-49397351:-|nuORF	ENST00000547306.5_1_12:49397039-49397351:-|nuORF	ENST00000547306.5_1_12:49397039-49397351:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.8020507693291	2	529.808908	1057.60326	2.0079	0.0010638	-1.3216	-0.00070019	0.68632	0.00036362	529.8080789277996	64.223	0.67383	64.223	63.983	64.657	0					56	20	4	0	0	0	0.87431	1	26913	26913		12.532	0.29089	1	20654000			20658	7245	10114	10153	23754	23754					0.07676557808372309
LSIYPVWQNNG	11	Unmodified	_LSIYPVWQNNG_					0	0	0			REV__ENST00000592937.1_1_19:2477233-2477596:+|nuORF	REV__ENST00000592937.1_1_19:2477233-2477596:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8894225955009	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.506	1	85.665	85.165	86.165	1.159								0	0	0	0.63775	1	35460	35460		4.7159	0.30977	1		+		20659	8955	10115	10154	23755	23755					0.007201845634881465
LSKAGFPK	8	Unmodified	_LSKAGFPK_					0	0	0			REV__ENSG00000164694|ENST00000297267|FNDC1	REV__ENSG00000164694|ENST00000297267|FNDC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	424.3062011599541	2	424.255446	846.496338	-0.34756	-0.00014745	3.7229	0.0015795	3.3753	0.001432	424.25733916681946	12.669	0.43134	12.669	12.498	12.93	0					26	13	2	0	0	0	2.3239	1	5200	5200		18.135	8.7875	1	1206700	+		20660	10746	10116	10155	23756	23756					0.06695007593975788
LSKAGFPK	8	Unmodified	_LSKAGFPK_					0	0	0			REV__ENSG00000164694|ENST00000297267|FNDC1	REV__ENSG00000164694|ENST00000297267|FNDC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	424.3061096072197	2	424.255446	846.496338	0.49771	0.00021116	3.5592	0.00151	4.0569	0.0017212	424.25743123491895	12.675	0.39952	12.764	12.522	12.922	0.089381					17	12	2	0	0	0	2.3239	1	5242	5242		18.135	8.7875	1	374830	+		20661	10746	10116	10155	23757	23757					0.06695007593975788
LSKAGFPK	8	Unmodified	_LSKAGFPK_					0	0	0			REV__ENSG00000164694|ENST00000297267|FNDC1	REV__ENSG00000164694|ENST00000297267|FNDC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	424.3056518435478	2	424.255446	846.496338	-0.24616	-0.00010443	4.2112	0.0017866	3.9651	0.0016822	424.2576216840029	12.215	0.31653	12.909	12.789	13.106	0.69395					11	9	2	0	0	0	2.3239	1	5076	5076		13.508	4.1604	1	162250	+		20662	10746	10116	10155	23758	23758					0.06695007593975788
LSKAGPAI	8	Unmodified	_LSKAGPAI_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2;ENST00000470046.1_1_22:50881704-50882673:+|nuORF	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	756.4556152224541	1	756.461416	755.454139	2.2161	0.0016764	-3.9132	-0.0029602	-1.6971	-0.0012838	756.4580656029375	60.176	0.78677	60.176	59.915	60.701	0					36	25	2	0	0	0	0.89176	1	25072	25072		0.79363	0	1	1013100			20663	1256	10117	10156	23759	23759					0.06663032185588236
LSKAGPAI	8	Unmodified	_LSKAGPAI_					0	0	0		nc|ENSG00000100239|O75170-6|PPP6R2;nc|ENSG00000100239|O75170-2|PPP6R2;nc|ENSG00000100239|O75170-4|PPP6R2;nc|ENSG00000100239|O75170-3|PPP6R2;ENSG00000100239|ENST00000612753|PPP6R2;nc|ENSG00000100239|O75170|PPP6R2;ENST00000470046.1_1_22:50881704-50882673:+|nuORF	nc|ENSG00000100239|O75170-6|PPP6R2	nc|ENSG00000100239|O75170-6|PPP6R2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	756.461416	755.454139	2.2603	0.0017099	-3.3778	-0.0025552	-1.1175	-0.00084532	756.4585879536525	60.007	0.95238	60.335	59.903	60.856	0.32809	0.079874	0.00015781	NaN	0.79363	39	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	981360			20664	1256	10117	10156							0.06663032185588236
LSKDSILSL	9	Unmodified	_LSKDSILSL_					0	0	0		nc|ENSG00000084070|Q8WU79-3|SMAP2;nc|ENSG00000084070|Q8WU79-2|SMAP2;ENSG00000084070|ENST00000372718|SMAP2;nc|ENSG00000112305|Q8IYB5-3|SMAP1;nc|ENSG00000112305|Q8IYB5-2|SMAP1;ENSG00000112305|ENST00000370455|SMAP1	nc|ENSG00000084070|Q8WU79-3|SMAP2	nc|ENSG00000084070|Q8WU79-3|SMAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.7597839236259	2	488.289682	974.564812	1.5962	0.0007794	2.6289	0.0012837	4.2251	0.0020631	488.2912628475317	46.381	0.28484	48.351	48.156	48.441	1.9703					13	8	2	0	0	0	0.11027	1	19410	19410		17.113	2.5312	1	630860			20665	1044	10118	10157	23760	23760					0.0765120738318501
LSKDVYYIS	9	Unmodified	_LSKDVYYIS_					0	0	0			REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2896606326103	2	544.28714	1086.55973	2.2382	0.0012182	1.0166	0.00055332	3.2548	0.0017715	544.2874815071983	39.785	0.21629	41.095	40.991	41.207	1.3102					10	6	2	0	0	0	0.53525	1	16699	16699		13.906	2.2658	1	901830	+		20666	10476	10119	10158	23761	23761					0.019909035205728287
LSKDVYYIS	9	Unmodified	_LSKDVYYIS_					0	0	0			REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.28714	1086.55973	2.2382	0.0012182	1.0166	0.00055332	3.2548	0.0017715	544.2874815071983	39.785	0.21629	41.095	40.991	41.207	1.3102	-0.045242	0.00088605	NaN	13.906	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	901830	+		20667	10476	10119	10158							0.019909035205728287
LSKDVYYIS	9	Unmodified	_LSKDVYYIS_					0	0	0			REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	REV__ENST00000368674.5_1_10:128191356-128211334:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	544.28714	1086.55973	1.5693	0.00085415	-0.031721	-1.7265E-05	1.5376	0.00083688	544.2866808467356	39.349	0.18571	41.186	41.066	41.252	1.8366	0.045242	-0.00025511	NaN	13.906	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570370	+		20668	10476	10119	10158							0.019909035205728287
LSKGGWAP	8	Unmodified	_LSKGGWAP_					0	0	0		ENST00000308713.9_3_16:29910520-29910610:-|nuORF	ENST00000308713.9_3_16:29910520-29910610:-|nuORF	ENST00000308713.9_3_16:29910520-29910610:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2233764529228	2	408.224146	814.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.993	1	85.631	85.131	86.131	1.6379								0	0	0	1.0178	1	35227	35227		0.79363	0	1				20669	5791	10120	10159	23762	23762					0.019098615257917118
LSKKKALAHR	10	Unmodified	_LSKKKALAHR_					0	0	0		HDAC4|p.N181S|1|0.12|ENSG00000068024|chr2:239163872-239163872|T/C|missense_variant	HDAC4|p.N181S|1|0.12|ENSG00000068024|chr2:239163872-239163872|T/C|missense_variant	HDAC4|p.N181S|1|0.12|ENSG00000068024|chr2:239163872-239163872|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1537963747978	3	384.583897	1150.72986	-0.2432	-9.3531E-05	-0.30538	-0.00011744	-0.54858	-0.00021097	384.58399006598995	41.342	0.16208	41.342	41.241	41.403	0					6	4	2	0	0	0	0.1256	1	17305	17305		0.13989	0	1	448340			20670	7616	10121	10160	23763	23763					0.16052484033502878
LSKKLRRKLQ	10	Unmodified	_LSKKLRRKLQ_					0	0	0		ENSG00000183691|ENST00000332822|NOG	ENSG00000183691|ENST00000332822|NOG	ENSG00000183691|ENST00000332822|NOG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1270.452441394329	1	1269.84775	1268.84047	1.6511	0.0020967	-1.9678	-0.0024988	-0.31667	-0.00040212	1269.844966532144	36.154	0.042847	36.154	36.117	36.16	0					6	5	2	0	0	0	0.12545	1	15153	15153		3.5965	0	1	16454000			20671	4660	10122	10161	23764	23764					0.21680704021741803
LSKLFILIIRF	11	Unmodified	_LSKLFILIIRF_					0	0	0		tr|A0A553SJQ0|A0A553SJQ0_NIACIPutativemembraneproteininsertionefficiencyfactorOS=NialliacirculansOX=1397GN=yidDPE=3SV=1	tr|A0A553SJQ0|A0A553SJQ0_NIACIPutativemembraneproteininsertionefficiencyfactorOS=NialliacirculansOX=1397GN=yidDPE=3SV=1	tr|A0A553SJQ0|A0A553SJQ0_NIACIPutativemembraneproteininsertionefficiencyfactorOS=NialliacirculansOX=1397GN=yidDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.1968566775322	4	341.477246	1361.87988	-2.0062	-0.00068508	2.8796	0.0009833	0.87331	0.00029822	341.47861293247007	28.702	0.30408	28.702	28.628	28.932	0					10	9	2	0	0	0	0.14606	1	12085	12085		0.45452	0.35968	1	157340			20672	16257	10123	10162	23765	23765					0.21341411252569742
LSKLIVCFL	9	Unmodified	_LSKLIVCFL_					0	0	0		GPR160|p.L301Dfs*12|1|0.07|ENSG00000173890|chr3:170084872-170084873|-/GATCTTTCTTTCCTTTACCTATGTTCTCATTA|frameshift_variant;GPR160|p.T322Qfs*14|1|0.04|ENSG00000173890|chr3:170084936-170084936|A/-|frameshift_variant;ENSG00000173890|ENST00000355897|GPR160	GPR160|p.L301Dfs*12|1|0.07|ENSG00000173890|chr3:170084872-170084873|-/GATCTTTCTTTCCTTTACCTATGTTCTCATTA|frameshift_variant	GPR160|p.L301Dfs*12|1|0.07|ENSG00000173890|chr3:170084872-170084873|-/GATCTTTCTTTCCTTTACCTATGTTCTCATTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1398803591728	2	518.317189	1034.61982	2.2805	0.001182	3.9675	0.0020564	6.248	0.0032384	518.3196346179294	68.022	0.67207	69.4	69.065	69.737	1.3778					33	21	2	0	0	0	0.11645	1	28558	28558		8.5933	0	1	1043800			20673	4304	10124	10163	23766	23766					0.10389922650097105
LSKLPRHH	8	Unmodified	_LSKLPRHH_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;nc|ENSG00000066135|O75164-2|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3473083376884	2	494.295968	986.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.33	1	103.49	102.99	103.99	0.16445								0	0	0	1.0178	1	43541	43541		0.79363	0	1				20674	800	10125	10164	23767	23767					0.08355708356737068
LSKNRELQKLP	11	Unmodified	_LSKNRELQKLP_					0	0	0		ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	ENSG00000112640|ENST00000485511|PPP2R5D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.6017333865166	3	442.601504	1324.78268	3.1149	0.0013787	-0.78848	-0.00034898	2.3264	0.0010297	442.6011042735551	90.87	0.38962	91.079	90.9	91.289	0.20904					18	11	2	0	0	0	1.0388	1	38079	38079		0.50596	0	1	787460			20675	1790	10126	10165	23768	23768					0.13328397305645012
LSKPKKCV	8	Unmodified	_LSKPKKCV_					0	0	0		ENSG00000155621|ENST00000334731|C9orf85;ENST00000377027.1_1_9:74533369-74587755:+|nuORF;nc|nan|Q96MD7|C9orf85	ENSG00000155621|ENST00000334731|C9orf85	ENSG00000155621|ENST00000334731|C9orf85	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	451.7721435427666	2	451.778231	901.541908	1.4985	0.00067698	2.7342	0.0012353	4.2327	0.0019122	451.77934417650675	66.933	0.19043	68.822	68.764	68.955	1.8889					7	5	2	0	0	0	2.3239	1	28061	28061		0.52476	0	1	160070			20676	3424	10127	10166	23769	23769					0.08719909784724678
LSKVILYWGDV	11	Unmodified	_LSKVILYWGDV_					0	0	0			REV__tr|A0A7D6VTC6|A0A7D6VTC6_9CLOTFlagellarbiosyntheticproteinFliPOS=ClostridiumintestinaleOX=36845GN=fliPPE=3SV=1	REV__tr|A0A7D6VTC6|A0A7D6VTC6_9CLOTFlagellarbiosyntheticproteinFliPOS=ClostridiumintestinaleOX=36845GN=fliPPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	646.8172485232353	2	646.866089	1291.71762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.951	1	97.236	96.736	97.736	0.28442								0	0	0	0.43387	1	40793	40793		29.082	8.667	1		+		20677	15483	10128	10167	23770	23770					0.08343402779792086
LSLAYEWL	8	Unmodified	_LSLAYEWL_					0	0	0		ENSG00000198840|ENST00000361227|MT-ND3	ENSG00000198840|ENST00000361227|MT-ND3	ENSG00000198840|ENST00000361227|MT-ND3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.3035461306572	2	497.765843	993.517133	2.6038	0.0012961	-1.2669	-0.00063064	1.3368	0.00066542	497.7656346495092	44.716	0.34198	46.081	45.9	46.242	1.3653					24	10	3	0	0	0	2.3239	1	18692	18692		8.5933	3.8373	1	1987900			20678	5092	10129	10168	23771	23771					0.02011553182978787
LSLDWKIMIFS	11	Unmodified	_LSLDWKIMIFS_					0	0	0			REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	676.8729736208916	2	676.867774	1351.72099	3.8975	0.0026381	1.7783	0.0012036	5.6758	0.0038417	676.8694086566182	92.544	0.39351	93.48	93.276	93.67	0.93623					29	11	3	0	0	0	0.74096	2	38939	38939;38989		17.113	3.2068	1	2567200	+		20679	14262	10130	10169	23772;23773	23772					0.059203295621273355
LSLDWKIMIFS	11	Unmodified	_LSLDWKIMIFS_					0	0	0			REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	676.867774	1351.72099	2.1064	0.0014258	1.3896	0.0009406	3.4961	0.0023664	676.8689270042482	93.765	0.3481	93.765	93.584	93.932	0	0.18335	-0.0012357	NaN	17.113	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	889340	+		20680	14262	10130	10169							0.059203295621273355
LSLDWKIMIFS	11	Unmodified	_LSLDWKIMIFS_					0	0	0			REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	REV__L1MA1_dup882|chr3:174894625-174897831:+|1.387705056550523|0.3345806313734131|2.05|429.0|13|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	676.867774	1351.72099	3.8975	0.0026381	1.7783	0.0012036	5.6758	0.0038417	676.8694086566182	92.544	0.39351	93.48	93.276	93.67	0.93623	-0.10209	-0.00070965	NaN	17.113	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2567200	+		20681	14262	10130	10169							0.059203295621273355
LSLEDCYTLC	10	Unmodified	_LSLEDCYTLC_					0	0	0			REV__ENSG00000198354|ENST00000360028|DCAF12L2	REV__ENSG00000198354|ENST00000360028|DCAF12L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.1715576052666	3	387.171842	1158.4937	1.5594	0.00060374	-1.9987	-0.00077385	-0.43936	-0.00017011	387.17093378318964	71.301	0.4221	72.643	72.451	72.873	1.3415					40	13	4	0	0	0	0.82019	1	29907	29907		5.7834	0	1	4244100	+		20682	11708	10131	10170	23774	23774					-0.07920996708139683
LSLEGISLLV	10	Unmodified	_LSLEGISLLV_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.7717773318291	2	522.320983	1042.62741	1.7023	0.00088916	2.6086	0.0013626	4.311	0.0022517	522.3226450456474	58.757	0.22476	60.175	60.035	60.26	1.4181					8	6	2	0	0	0	0.1234	1	24633	24633		22.736	9.6938	1	753020	+		20683	11523	10132	10171	23775	23775					0.10780353451400515
LSLEGISLLV	10	Unmodified	_LSLEGISLLV_					0	0	0			REV__nc|ENSG00000188672|P18577-4|RHCE	REV__nc|ENSG00000188672|P18577-4|RHCE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.7739135622978	2	522.320983	1042.62741	1.2039	0.00062885	3.4513	0.0018027	4.6553	0.0024315	522.3225190740804	58.243	0.19432	60.212	60.084	60.279	1.969					7	5	2	0	0	0	0.12271	1	24429	24429		36.127	8.4982	1	561750	+		20684	11523	10132	10171	23776	23776					0.10780353451400515
LSLERRLFEMK	11	Unmodified	_LSLERRLFEMK_					0	0	0		ENST00000529230.5_1_11:46832627-46837749:-|nuORF	ENST00000529230.5_1_11:46832627-46837749:-|nuORF	ENST00000529230.5_1_11:46832627-46837749:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	474.2341796755791	3	474.602628	1420.78605	0.89559	0.00042505	-2.8858	-0.0013696	-1.9902	-0.00094457	474.6011139160271	26.947	0.7108	28.694	28.556	29.266	1.747					53	22	4	0	0	0	0.14606	1	11319	11319		0.50596	0	1	2551800			20685	7152	10133	10172	23777	23777					0.09249324087954847
LSLEVTPSF	9	Unmodified	_LSLEVTPSF_					0	0	0		MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7729369997978	2	496.768583	991.522613	5.1825	0.0025745	3.1614	0.0015705	8.344	0.004145	496.7702017094626	89.55	0.37572	90.57	90.333	90.708	1.0199					23	11	3	0	0	0	0.59203	1	37708	37708		11.64	0	1	1365800			20686	7803	10134	10173	23778	23778					0.026512319748121627
LSLEVTPSF	9	Unmodified	_LSLEVTPSF_					0	0	0		MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MXRA5|p.P820S|1|0.4|ENSG00000101825|chrX:3323227-3323227|G/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	496.768583	991.522613	3.2632	0.001621	2.7086	0.0013456	5.9718	0.0029666	496.7700964191994	90.375	0.30509	90.584	90.435	90.74	0.20904	-0.047459	-0.00046198	NaN	11.64	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	646130			20687	7803	10134	10173							0.026512319748121627
LSLFRSEL	8	Unmodified	_LSLFRSEL_					0	0	0		ENST00000489171.5_1_10:45466954-45488774:+|nuORF	ENST00000489171.5_1_10:45466954-45488774:+|nuORF	ENST00000489171.5_1_10:45466954-45488774:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.7776061892509	2	482.776742	963.538931	0.89794	0.0004335	1.2547	0.00060573	2.1526	0.0010392	482.77761033690143	56.426	0.28022	57.84	57.69	57.971	1.4145					15	8	3	0	0	0	0.52812	1	23651	23651		53.833	0.25722	1	1878100			20688	6894	10135	10174	23779	23779					0.05570357931560466
LSLFYKKV	8	Unmodified	_LSLFYKKV_					0	0	0		ITM2B-RB1|2|fusion;ITM2B-RB1|3|fusion;RB1|p.L797*|1|0.5|ENSG00000139687|chr13:48465269-48465285|TACGGATTCCTGGAGGG/-|frameshift_variant;ITM2B-RB1|4|fusion;ITM2B-RB1|1|fusion;ENSG00000139687|ENST00000267163|RB1	ITM2B-RB1|2|fusion	ITM2B-RB1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3091308474541	2	499.307678	996.600803	1.8426	0.00092002	1.3212	0.0006597	3.1638	0.0015797	499.3076991978606	50.707	0.15921	50.707	50.628	50.787	0					8	4	2	0	0	0	0.86113	1	21156	21156		14.582	1.0738	1	646290			20689	2888	10136	10175	23780	23780					0.10236709350704132
LSLGGKGV	8	Unmodified	_LSLGGKGV_					0	0	0		tr|A0A7D6VY07|A0A7D6VY07_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	tr|A0A7D6VY07|A0A7D6VY07_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	tr|A0A7D6VY07|A0A7D6VY07_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.7281066775322	2	365.726521	729.438489	0.10611	3.8806E-05	3.2752	0.0011978	3.3813	0.0012366	365.72781436455404	22.773	0.15319	23.987	23.919	24.072	1.2145					7	4	2	0	0	0	0.88163	1	9515	9515		7.9102	0	1	561740			20690	16993	10137	10176	23781	23781					0.06294745668571977
LSLGLGLRV	9	Unmodified	_LSLGLGLRV_					0	0	0		ENSG00000187905|ENST00000442047|LRRC74B	ENSG00000187905|ENST00000442047|LRRC74B	ENSG00000187905|ENST00000442047|LRRC74B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	465.1230956912041	2	464.302927	926.591301	1.7166	0.00079701	0.43571	0.0002023	2.1523	0.00099932	464.30318692456893	55.07	0.33954	56.475	56.302	56.642	1.4048					19	11	2	0	0	0	0.11071	1	23053	23053		6.7232	6.1217	1	3590200			20691	4843	10138	10177	23782	23782					0.125069410651804
LSLGLGLRV	9	Unmodified	_LSLGLGLRV_					0	0	0		ENSG00000187905|ENST00000442047|LRRC74B	ENSG00000187905|ENST00000442047|LRRC74B	ENSG00000187905|ENST00000442047|LRRC74B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	464.302927	926.591301	2.0439	0.00094899	0.25762	0.00011962	2.3015	0.0010686	464.30319603081153	54.576	0.34636	56.544	56.348	56.695	1.9684	-0.079824	-0.00023686	NaN	6.7232	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2986300			20692	4843	10138	10177							0.125069410651804
LSLGPPLISP	10	Unmodified	_LSLGPPLISP_					0	0	0			REV__ENST00000464431.1_1_3:127395028-127395444:+|nuORF	REV__ENST00000464431.1_1_3:127395028-127395444:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	497.8191406130791	2	497.302593	992.590633	1.534	0.00076285	3.7551	0.0018674	5.2891	0.0026303	497.30290559627974	77.924	0.22114	77.924	77.811	78.032	0					10	6	2	0	0	0	0.12321	1	32476	32476		30.637	1.555	1	615090	+		20693	13226	10139	10178	23783	23783					0.09404101625477779
LSLGSFLLEL	10	Unmodified	_LSLGSFLLEL_					0	0	0		ENST00000415811.7_2_17:45012662-45012788:+|nuORF	ENST00000415811.7_2_17:45012662-45012788:+|nuORF	ENST00000415811.7_2_17:45012662-45012788:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3216430544853	2	546.320983	1090.62741	1.3586	0.00074223	-0.96916	-0.00052947	0.38944	0.00021276	546.3208027510938	71.264	0.72895	71.264	70.907	71.636	0					46	20	4	0	0	0	0.47063	1	29715	29715		29.082	2.8134	1	2450300			20694	6404	10140	10179	23784	23784					0.0857235345135905
LSLGTPSEYHY	11	Unmodified	_LSLGTPSEYHY_					0	0	0		MYO7B|p.G920Afs*6|1|0.4|ENSG00000169994|chr2:127608822-127608822|G/-|frameshift_variant;nc|ENSG00000169994|Q6PIF6-2|MYO7B;MYO7B|p.A2010Pfs*5|1|0.38|ENSG00000169994|chr2:127636307-127636307|G/-|frameshift_variant;nc|ENSG00000169994|Q6PIF6|MYO7B;ENSG00000169994|ENST00000409816|MYO7B	MYO7B|p.G920Afs*6|1|0.4|ENSG00000169994|chr2:127608822-127608822|G/-|frameshift_variant	MYO7B|p.G920Afs*6|1|0.4|ENSG00000169994|chr2:127608822-127608822|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.8060790896416	2	633.803685	1265.59282	1.6596	0.0010519	2.6668	0.0016902	4.3264	0.0027421	633.8056957062399	46.512	0.28272	46.841	46.708	46.99	0.32942					13	9	2	0	0	0	0.87205	2	19509	19509;19556		11.495	0	1	765070			20695	4125	10141	10180	23785;23786	23785					-0.029355144273722544
LSLHNTFQH	9	Unmodified	_LSLHNTFQH_					0	0	0		ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.1905395388603	3	366.189324	1095.54614	2.4905	0.00091198	2.857	0.0010462	5.3475	0.0019582	366.1904093575244	61.935	0.43649	63.892	63.594	64.03	1.9571					20	13	3	0	0	0	0.53525	1	25995	25995		9.544	0	1	1177300			20696	1308	10142	10181	23787	23787					0.002190905319821468
LSLHNTFQH	9	Unmodified	_LSLHNTFQH_					0	0	0		ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	366.189324	1095.54614	1.8284	0.00066955	3.1506	0.0011537	4.9791	0.0018233	366.19035037949146	62.5	0.30499	63.913	63.711	64.016	1.4134	0.010586	0.00014924	NaN	9.544	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1399300			20697	1308	10142	10181							0.002190905319821468
LSLIPIISG	9	Unmodified	_LSLIPIISG_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1;nc|ENSG00000127526|Q96K37-3|SLC35E1;ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.8642455935478	3	304.863666	911.569169	0.023047	7.026E-06	2.4907	0.00075931	2.5137	0.00076634	304.8644005792694	22.371	0.41525	22.594	22.465	22.88	0.223					36	13	3	0	0	0	0.83753	1	9351	9351		0.96228	0	1	7559100			20698	2339	10143	10182	23788	23788					0.1098471659677216
LSLITGPPG	9	Unmodified	_LSLITGPPG_					0	0	0			REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.7545043826103	2	427.752736	853.490919	2.2645	0.00096864	2.9203	0.0012492	5.1848	0.0022178	427.75386023056603	77.68	0.40826	77.997	77.826	78.234	0.31653					30	12	3	0	0	0	0.7849	1	32502	32502		3.9444	1.6417	1	2674100	+		20699	12880	10144	10183	23789	23789					0.0583128401152635
LSLITGPPG	9	Unmodified	_LSLITGPPG_					0	0	0			REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	427.752736	853.490919	2.2645	0.00096864	2.9203	0.0012492	5.1848	0.0022178	427.75386023056603	77.68	0.40826	77.997	77.826	78.234	0.31653	0.020445	-0.00030887	NaN	3.9444	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2674100	+		20700	12880	10144	10183							0.0583128401152635
LSLITGPPG	9	Unmodified	_LSLITGPPG_					0	0	0			REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	427.752736	853.490919	2.6262	0.0011233	3.5437	0.0015158	6.1699	0.0026392	427.7540476989844	76.766	0.46928	78.06	77.857	78.326	1.2938	0.084076	0.00022448	NaN	3.9444	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2705700	+		20701	12880	10144	10183							0.0583128401152635
LSLITGPPG	9	Unmodified	_LSLITGPPG_					0	0	0			REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	REV__ENST00000400385.2_1_21:45231454-45232126:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	427.752736	853.490919	2.7857	0.0011916	3.339	0.0014283	6.1247	0.0026199	427.75369309965663	76.104	0.50023	77.872	77.627	78.127	1.7672	-0.10452	4.9343E-05	NaN	3.9444	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2331200	+		20702	12880	10144	10183							0.0583128401152635
LSLKDFKSV	9	Unmodified	_LSLKDFKSV_					0	0	0			REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1400634646416	2	518.8055	1035.59645	2.7471	0.0014252	-3.0911	-0.0016037	-0.344	-0.00017847	518.8038254407937	85.276	0.28516	85.276	85.132	85.417	0					14	8	2	0	0	0	0.11463	1	35555	35555		7.9102	0	1	1007800	+		20703	15402	10145	10184	23790	23790					0.08007200137149084
LSLKDFKSV	9	Unmodified	_LSLKDFKSV_					0	0	0			REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1401855349541	2	518.8055	1035.59645	2.7161	0.0014092	-2.5463	-0.001321	0.16988	8.8136E-05	518.8041181523333	84.809	0.286	85.07	84.919	85.204	0.26083					17	8	3	0	0	0	0.11463	1	35421	35421		7.9102	0	1	1103800	+		20704	15402	10145	10184	23791	23791					0.08007200137149084
LSLKDFKSV	9	Unmodified	_LSLKDFKSV_					0	0	0			REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	518.8055	1035.59645	1.6107	0.00083562	-5.0008	-0.0025945	-3.3902	-0.0017588	518.8023406491171	83.984	0.32086	85.171	84.987	85.307	1.1879	0.0076709	-0.0017692	NaN	7.9102	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2959100	+		20705	15402	10145	10184							0.08007200137149084
LSLKDFKSV	9	Unmodified	_LSLKDFKSV_					0	0	0			REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	REV__tr|A0A7D6VR27|A0A7D6VR27_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17575PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	518.8055	1035.59645	1.7113	0.00088784	-5.1555	-0.0026747	-3.4442	-0.0017869	518.802519775853	83.5	0.33705	85.138	85.01	85.347	1.6379	-0.026208	-0.0019297	NaN	7.9102	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2237800	+		20706	15402	10145	10184							0.08007200137149084
LSLLDLITL	9	Unmodified	_LSLLDLITL_					0	0	0			REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8192321658134	2	500.818076	999.621598	3.1509	0.001578	-1.1407	-0.00057127	2.0102	0.0010068	500.8173662170471	86.18	0.506	86.432	86.193	86.699	0.25227					39	16	3	0	0	0	0.042029	1	36074	36074		74.423	3.7072	1	4914000	+		20707	8455	10146	10185	23792	23792					0.12177254939717841
LSLLDLITL	9	Unmodified	_LSLLDLITL_					0	0	0			REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8205749392509	2	500.818076	999.621598	2.56	0.0012821	-1.1401	-0.00057096	1.4199	0.00071112	500.817552812774	85.306	0.45019	86.465	86.21	86.661	1.159					38	16	3	0	0	0	0.022807	2	35742	35742;35793		97.075	11.718	1	15319000	+		20708	8455	10146	10185	23793;23794	23793					0.12177254939717841
LSLLDLITL	9	Unmodified	_LSLLDLITL_					0	0	0			REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	REV__DOCK10|p.I1947Dfs*8|1|0.06|ENSG00000135905|chr2:224775073-224775080|CCTGGATG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8200256228447	2	500.818076	999.621598	2.5031	0.0012536	-0.53984	-0.00027036	1.9633	0.00098325	500.81772424855075	84.85	0.47401	86.446	86.158	86.632	1.5962					43	16	4	0	0	0	0.042029	1	35520	35520		74.423	3.7072	1	15786000	+		20709	8455	10146	10185	23795	23795					0.12177254939717841
LSLLFWVP	8	Unmodified	_LSLLFWVP_					0	0	0		ENST00000395146.8_1_4:88060781-88060937:+|nuORF	ENST00000395146.8_1_4:88060781-88060937:+|nuORF	ENST00000395146.8_1_4:88060781-88060937:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7917663455009	2	487.789121	973.56369	2.644	0.0012897	3.0526	0.001489	5.6966	0.0027788	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.88504	1	27123	27123		5.7604	0	1	1452800			20710	6289	10147	10186	23796	23796					0.0758503780493811
LSLLRGLPD	9	Unmodified	_LSLLRGLPD_					0	0	0			REV__ENST00000270645.7_1_19:50046533-50046872:+|nuORF	REV__ENST00000270645.7_1_19:50046533-50046872:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2988159060478	2	492.297842	982.581131	2.64	0.0012997	-0.25705	-0.00012654	2.3829	0.0011731	492.2972737870248	44.959	0.40941	46.324	46.088	46.497	1.3653					26	12	3	0	0	0	0.23535	2	18833	18833;18875		29.082	0	1	2639100	+		20711	12234	10148	10187	23797;23798	23797					0.08914333339930636
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5280944705009	3	323.528512	967.563706	-2.7435	-0.0008876	2.8307	0.00091581	0.087182	2.8206E-05	323.52959893067833	26.393	0.41634	26.393	26.148	26.564	0					25	13	2	0	0	0	0.89051	2	10984	10984;11028		3.5965	0	1	85550000	+		20712	15241	10149	10188	23799;23800	23799					0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5281860232353	3	323.528512	967.563706	-2.7273	-0.00088235	2.4978	0.00080812	-0.22944	-7.4232E-05	323.52933561659546	26.73	0.32775	26.73	26.564	26.892	0					39	10	4	0	0	0	0.88663	1	11136	11136		3.2813	0	1	55073000	+		20713	15241	10149	10188	23801	23801					0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5277892947197	3	323.528512	967.563706	-2.71	-0.00087677	1.6912	0.00054715	-1.0188	-0.00032962	323.529114678201	27.124	0.36655	27.124	26.892	27.259	0					41	11	4	0	0	0	0.88055	2	11293	11293;11340		6.2058	0	1	50652000	+		20714	15241	10149	10188	23802;23803	23802					0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5281555056572	3	323.528512	967.563706	-2.6959	-0.00087221	1.6327	0.00052821	-1.0633	-0.000344	323.52891801518007	27.395	0.68884	27.395	27.259	27.948	0					60	22	4	0	0	0	0.88587	3	11446	11446;11496;11535		6.7232	3.1267	1	44001000	+		20715	15241	10149	10188	23804;23805;23806	23804					0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	323.4735900759697	3	323.528512	967.563706	-2.6959	-0.00087221	1.6327	0.00052821	-1.0633	-0.000344	323.52891801518007	27.395	0.68884	27.395	27.259	27.948	0					60	22	4	0	0	0	2.3239	1	11431	11431		3.5965	0	1	44001000	+		20716	15241	10149	10188	23807	23807					0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	323.528512	967.563706	0.3001	9.7091E-05	0.0089272	2.8882E-06	0.30903	9.9979E-05	323.5284444622626	26.822	0.96003	27.084	26.926	27.886	0.26173	-0.019881	-0.00085033	NaN	6.2058	65	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48635000	+		20717	15241	10149	10188							0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	323.528512	967.563706	0.264	8.5411E-05	2.0879	0.00067548	2.3519	0.00076089	323.52898023047146	26.157	0.32813	26.418	26.264	26.592	0.26173	-0.043309	0.00027691	NaN	3.5965	29	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50656000	+		20718	15241	10149	10188							0.07862714533303006
LSLMVLHR	8	Unmodified	_LSLMVLHR_					0	0	0			REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	REV__tr|A0A553STI5|A0A553STI5_NIACIS-methylmethioninepermeaseOS=NialliacirculansOX=1397GN=CEQ21_05110PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	323.528512	967.563706	0.067216	2.1746E-05	0.38926	0.00012594	0.45648	0.00014768	323.52866733831013	25.314	0.36521	26.573	26.376	26.741	1.2594	0.11158	-0.0013717	NaN	3.5965	40	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65193000	+		20719	15241	10149	10188							0.07862714533303006
LSLPKPGAPR	10	Unmodified	_LSLPKPGAPR_					0	0	0			REV__ENST00000264499.8_1_4:122791489-122791549:-|nuORF	REV__ENST00000264499.8_1_4:122791489-122791549:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6271240115166	2	518.319109	1034.62366	2.0577	0.0010665	-2.4583	-0.0012742	-0.40066	-0.00020767	518.3187195174419	80.327	0.24657	80.618	80.468	80.715	0.29056					17	7	3	0	0	0	0.12513	1	33523	33523		5.2969	1.3525	1	1316000	+		20720	12214	10150	10189	23808	23808					0.10773728468188892
LSLPQQAVK	9	Unmodified	_LSLPQQAVK_					0	0	0			REV__nc|ENSG00000169129|Q8N4X5-2|AFAP1L2	REV__nc|ENSG00000169129|Q8N4X5-2|AFAP1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2999450564384	2	492.297842	982.581131	2.4334	0.001198	0.42789	0.00021065	2.8613	0.0014086	492.2981708907128	46.541	0.36767	46.872	46.624	46.991	0.33034					21	12	2	0	0	0	0.30098	1	19542	19542		25.399	7.253	1	790350	+		20721	10932	10151	10190	23809	23809					0.08914333339942004
LSLPRNLLC	9	Unmodified	_LSLPRNLLC_					0	0	0			REV__ENSG00000130701|ENST00000252998|RBBP8NL	REV__ENSG00000130701|ENST00000252998|RBBP8NL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5346252322197	3	343.535555	1027.58484	-2.0528	-0.0007052	0.47995	0.00016488	-1.5728	-0.00054032	343.5355899446851	26.141	0.88451	26.141	25.472	26.357	0					63	28	3	0	0	0	0.79386	1	10953	10953		3.5871	0	1	3239800	+		20722	9792	10152	10191	23810	23810					0.072146798421727
LSLPSSWTL	9	Unmodified	_LSLPSSWTL_					0	0	0		PTGDR|p.V318Gfs*59|1|0.09|ENSG00000168229|chr14:52274836-52274837|-/GCCTCAGCCTCCCGAGTAGC|frameshift_variant	PTGDR|p.V318Gfs*59|1|0.09|ENSG00000168229|chr14:52274836-52274837|-/GCCTCAGCCTCCCGAGTAGC|frameshift_variant	PTGDR|p.V318Gfs*59|1|0.09|ENSG00000168229|chr14:52274836-52274837|-/GCCTCAGCCTCCCGAGTAGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2783080935478	2	502.276575	1002.5386	1.9463	0.0009776	0.20527	0.0001031	2.1516	0.0010807	502.27706980288633	66.727	0.49838	68.116	67.812	68.31	1.3888					27	15	3	0	0	0	0.42305	1	27991	27991		19.257	1.1106	1	4420800			20723	8065	10153	10192	23811	23811					0.03742938211712499
LSLQADLSV	9	Unmodified	_LSLQADLSV_					0	0	0		nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2;ENSG00000160796|ENST00000450053|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	nc|ENSG00000160796|Q6ZNJ1-3|NBEAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2669250369072	2	473.266207	944.517862	2.9301	0.0013867	-1.029	-0.00048697	1.9012	0.00089975	473.2657499669987	59.36	0.54503	61.329	61.037	61.582	1.969					50	17	4	0	0	0	0.10993	1	24920	24920		46.021	0	1	27410000			20724	3577	10154	10193	23812	23812					0.043383478320379254
LSLQRVLPC	9	Unmodified	_LSLQRVLPC_					0	0	0			REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|133|1|anti-sense	REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|133|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5348693728447	3	343.535555	1027.58484	-2.0528	-0.0007052	0.47995	0.00016488	-1.5728	-0.00054032	343.5355899446851	26.141	0.88451	26.141	25.472	26.357	0					63	28	3	0	0	0	0.8462	1	10840	10840		1.0715	0.10919	1	3239800	+		20725	14171	10155	10194	23813	23813					0.072146798421727
LSLRESASF	9	Unmodified	_LSLRESASF_					0	0	0			REV__ENSG00000163666|ENST00000295934|HESX1	REV__ENSG00000163666|ENST00000295934|HESX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2684509158134	2	505.269281	1008.52401	2.203	0.0011131	-2.3423	-0.0011835	-0.13928	-7.0376E-05	505.268088751125	69.12	0.43622	70.486	70.122	70.558	1.3657					36	13	4	0	0	0	0.42305	1	28932	28932		19.257	2.1441	1	3903300	+		20726	10696	10156	10195	23814	23814					0.02008866063579262
LSLRESASF	9	Unmodified	_LSLRESASF_					0	0	0			REV__ENSG00000163666|ENST00000295934|HESX1	REV__ENSG00000163666|ENST00000295934|HESX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2715331912041	2	505.269281	1008.52401	1.7412	0.00087976	-0.8266	-0.00041766	0.91457	0.00046211	505.2688145991919	68.54	0.37996	70.393	70.088	70.468	1.853					28	11	3	0	0	0	0.42305	1	28699	28699		19.257	3.4098	1	4186600	+		20727	10696	10156	10195	23815	23815					0.02008866063579262
LSLSLDILA	9	Unmodified	_LSLSLDILA_					0	0	0			REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	944.5695068240166	1	944.566275	943.558998	3.4723	0.0032798	2.1079	0.001991	5.5802	0.0052709	944.5696440654222	96.688	0.12482	96.995	96.913	97.038	0.3062					7	3	3	0	0	0	0.076627	1	40674	40674		57.471	0	1	3460100	+		20728	14793	10157	10196	23816	23816					0.0849610887153176
LSLSLDILA	9	Unmodified	_LSLSLDILA_					0	0	0			REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	944.566275	943.558998	2.7592	0.0026063	-5.3177	-0.0050229	-2.5585	-0.0024166	944.5602779624531	97.005	0.094574	97.11	97.038	97.132	0.105	0.057855	-0.0035202	NaN	57.471	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	859250	+		20729	14793	10157	10196							0.0849610887153176
LSLSLDILA	9	Unmodified	_LSLSLDILA_					0	0	0			REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	REV__tr|A0A553SHF8|A0A553SHF8_NIACIVWAdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12815PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	944.566275	943.558998	3.4723	0.0032798	2.1079	0.001991	5.5802	0.0052709	944.5696440654222	96.688	0.12482	96.995	96.913	97.038	0.3062	-0.057855	0.0034937	NaN	57.471	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3460100	+		20730	14793	10157	10196							0.0849610887153176
LSLSPRHIL	9	Unmodified	_LSLSPRHIL_					0	0	0			REV__ENST00000554456.1_1_14:58711972-58712140:+|nuORF	REV__ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6251098513603	2	518.319109	1034.62366	2.5284	0.0013105	2.2548	0.0011687	4.7832	0.0024792	518.3212608543903	47.888	0.24693	49.864	49.681	49.928	1.976					13	7	2	0	0	0	0.10339	1	20021	20021		14.838	2.5976	1	642310	+		20731	13853	10158	10197	23817	23817					0.10773728468188892
LSLSRKQSI	9	Unmodified	_LSLSRKQSI_					0	0	0		tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.7864868044853	2	516.314023	1030.61349	2.2932	0.001184	2.5953	0.00134	4.8886	0.002524	516.3143355967172	69.315	0.40836	70.681	70.53	70.939	1.3657					24	13	3	0	0	0	0.078322	1	29152	29152		20.454	4.6064	1	4020000			20732	16664	10159	10198	23818	23818					0.0994112074295117
LSLSRKQSI	9	Unmodified	_LSLSRKQSI_					0	0	0		tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	516.314023	1030.61349	1.8705	0.00096579	1.6045	0.00082845	3.4751	0.0017942	516.3145310626629	71.232	0.41102	71.232	71.003	71.415	0	0.30188	-0.0006396	NaN	20.454	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730260			20733	16664	10159	10198							0.0994112074295117
LSLSRKQSI	9	Unmodified	_LSLSRKQSI_					0	0	0		tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	tr|A0A553STP4|A0A553STP4_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_05385PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.314023	1030.61349	1.5042	0.00077663	2.9876	0.0015426	4.4918	0.0023192	516.3146806076403	70.554	0.40104	70.877	70.678	71.079	0.32224	-0.053029	0.00078861	NaN	20.454	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1757900			20734	16664	10159	10198							0.0994112074295117
LSLSVTATL	9	Unmodified	_LSLSVTATL_					0	0	0		ENST00000473875.5_1_1:244724068-244773670:+|nuORF;nc|ENSG00000179397|Q5SY80-3|CATSPERE;nc|ENSG00000179397|Q5SY80-2|CATSPERE;ENSG00000179397|ENST00000366534|CATSPERE	ENST00000473875.5_1_1:244724068-244773670:+|nuORF	ENST00000473875.5_1_1:244724068-244773670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	904.5363036990166	1	904.534975	903.527698	1.0272	0.00092916	0.49356	0.00044644	1.5208	0.0013756	904.535521764233	80.024	0.34237	81.741	81.537	81.879	1.7167					17	10	2	0	0	0	0.12174	1	33611	33611		42.095	0	1	1450600			20735	4513	10160	10199	23819	23819					0.07207535837449086
LSLTVDNLSLK	11	Unmodified	_LSLTVDNLSLK_					0	0	0			REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	602.3547851443291	2	601.853178	1201.6918	2.105	0.0012669	0.13552	8.1562E-05	2.2405	0.0013485	601.8532205624475	41.995	0.40635	41.995	41.821	42.227	0					37	12	4	0	0	0	0.066063	1	17544	17544		63.227	3.8591	1	8963300	+		20736	11325	10161	10200	23820	23820					0.09902508537516042
LSLWTKEFYD	10	Unmodified	_LSLWTKEFYD_					0	0	0			REV__ENST00000479285.5_1_1:114437689-114438127:-|nuORF	REV__ENST00000479285.5_1_1:114437689-114438127:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3202392458916	2	651.324254	1300.63395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.827	1	87.827	87.327	88.327	0								0	0	0	0.65676	1	36710	36710		8.1555	1.9497	1		+		20737	9900	10162	10201	23821	23821					-0.0043375338791520335
LSLWTKEFYD	10	Unmodified	_LSLWTKEFYD_					0	0	0			REV__ENST00000479285.5_1_1:114437689-114438127:-|nuORF	REV__ENST00000479285.5_1_1:114437689-114438127:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	651.3231078982353	2	651.324254	1300.63395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.022	1	55.343	54.843	55.843	0.32088								0	0	0	0.65219	1	23039	23039		12.241	0.74595	1		+		20738	9900	10162	10201	23822	23822					-0.0043375338791520335
LSMEPCGHCLI	11	Unmodified	_LSMEPCGHCLI_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-4|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.7759277224541	2	601.771962	1201.52937	0.94376	0.00056793	3.0579	0.0018402	4.0017	0.0024081	601.7741736395092	56.49	0.24827	57.904	57.753	58.001	1.4145					14	7	2	0	0	0	0.70499	1	23694	23694		18.146	2.2992	1	1298400			20739	121	10163	10202	23823	23823					-0.06333237732133057
LSMEPCGHCLI	11	Unmodified	_LSMEPCGHCLI_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-4|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.7750732302666	2	601.771962	1201.52937	1.0861	0.00065358	3.4612	0.0020829	4.5473	0.0027365	601.7736950770928	55.939	0.2465	57.907	57.811	58.057	1.9684					13	7	3	0	0	0	0.84637	1	23501	23501		13.042	2.2185	1	1242000			20740	121	10163	10202	23824	23824					-0.06333237732133057
LSMFHPRPFVK	11	Unmodified	_LSMFHPRPFVK_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MSMS	GG20161007_CRH_Patient100_W632_02	4	453.5871459841728	3	453.584909	1357.7329	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.693	1	24.344	23.844	24.844	1.6511								0	0	0	0.63775	1	9473	9473		6.2344	0.36622	1				20741	3620	10164	10203	23825	23825					0.06833991095982128
LSMIRFRYRIL	11	Unmodified	_LSMIRFRYRIL_					0	0	0		SENP5|p.N620Rfs*8|1|0.09|ENSG00000119231|chr3:196903584-196903585|-/G|frameshift_variant;SENP5|p.N656*|1|0.05|ENSG00000119231|chr3:196923494-196923495|-/TG|frameshift_variant;SENP5|p.R657Lfs*27|1|0.05|ENSG00000119231|chr3:196923495-196923496|-/ACTTGAGCAGACTTGCTTCAGAGCCCATG|frameshift_variant;nc|ENSG00000119231|Q96HI0-2|SENP5;ENSG00000119231|ENST00000323460|SENP5	SENP5|p.N620Rfs*8|1|0.09|ENSG00000119231|chr3:196903584-196903585|-/G|frameshift_variant	SENP5|p.N620Rfs*8|1|0.09|ENSG00000119231|chr3:196903584-196903585|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	734.6099120974541	2	734.434481	1466.85441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.74	1	100.92	100.42	101.42	0.18047								0	0	0	0.63775	1	42389	42389		1.3295	0	1				20742	2061	10165	10204	23826	23826					0.13965613458526605
LSMLAMTDL	9	Unmodified	_LSMLAMTDL_					0	0	0		ENSG00000181616|ENST00000322653|OR52H1	ENSG00000181616|ENST00000322653|OR52H1	ENSG00000181616|ENST00000322653|OR52H1	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1703674197197	3	332.169773	993.48749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.006	1	22.131	21.631	22.631	1.1254								0	0	0	0.42693	1	8762	8762		1.0715	0	1				20743	4583	10166	10205	23827	23827					-0.009514701489933941
LSNFLQKVK	9	Unmodified	_LSNFLQKVK_					0	0	0			REV__ENSG00000087269|ENST00000416614|NOP14	REV__ENSG00000087269|ENST00000416614|NOP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8286620974541	2	538.826766	1075.63898	0.88166	0.00047506	2.0587	0.0011093	2.9404	0.0015844	538.8279364629375	31.078	0.28666	32.359	32.183	32.469	1.2813					10	8	2	0	0	0	0.63129	1	13049	13049		10.074	0	1	494080	+		20744	8869	10167	10206	23828	23828					0.1041859526535518
LSNFLQKVK	9	Unmodified	_LSNFLQKVK_					0	0	0			REV__ENSG00000087269|ENST00000416614|NOP14	REV__ENSG00000087269|ENST00000416614|NOP14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	538.826766	1075.63898	0.88166	0.00047506	2.0587	0.0011093	2.9404	0.0015844	538.8279364629375	31.078	0.28666	32.359	32.183	32.469	1.2813	0.031607	5.1951E-05	NaN	10.074	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494080	+		20745	8869	10167	10206							0.1041859526535518
LSNFLQKVK	9	Unmodified	_LSNFLQKVK_					0	0	0			REV__ENSG00000087269|ENST00000416614|NOP14	REV__ENSG00000087269|ENST00000416614|NOP14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	538.826766	1075.63898	0.95233	0.00051314	1.9831	0.0010686	2.9354	0.0015817	538.8279033237563	30.48	0.25057	32.296	32.169	32.419	1.8151	-0.031607	-2.9536E-05	NaN	10.074	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288570	+		20746	8869	10167	10206							0.1041859526535518
LSNIRLPLC	9	Unmodified	_LSNIRLPLC_					0	0	0		ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18;ENSG00000114648|ENST00000232766|KLHL18	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5349914431572	3	343.535555	1027.58484	0.44264	0.00015206	-1.9097	-0.00065604	-1.467	-0.00050397	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.82654	1	10641	10641		2.2828	0.3764	1	4123700			20747	1874	10168	10207	23829	23829					0.072146798421727
LSNIRLPLC	9	Unmodified	_LSNIRLPLC_					0	0	0		ENST00000461084.5_1_3:47324437-47378284:+|nuORF;nc|ENSG00000114648|O94889-2|KLHL18;ENSG00000114648|ENST00000232766|KLHL18	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	ENST00000461084.5_1_3:47324437-47378284:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5348388552666	3	343.535555	1027.58484	0.083449	2.8668E-05	-1.7338	-0.00059562	-1.6503	-0.00056695	343.5349027126298	23.747	0.45019	25.402	25.088	25.539	1.6549					26	14	2	0	0	0	0.82654	1	9959	9959		2.2828	0.5405	1	3528800			20748	1874	10168	10207	23830	23830					0.072146798421727
LSNLILCIF	9	Carbamidomethyl (C)	_LSNLILC(Carbamidomethyl (C))IF_	LSNLILC(1)IF		LSNLILC(64)IF		0	1	0		ENST00000561529.1_1_16:71599967-71606118:+|nuORF	ENST00000561529.1_1_16:71599967-71606118:+|nuORF	ENST00000561529.1_1_16:71599967-71606118:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8074828982353	2	546.809728	1091.6049	0.75711	0.000414	-2.2181	-0.0012129	-1.461	-0.00079887	546.808302867855	35.912	0.28951	37.729	37.581	37.871	1.8176					29	16	2	0	0	0	0.059546	1	15084	15084		64.236	6.765	1	4903500			20749	7334	10169	10208	23831	23831	11				0.06276430782077114
LSNLMKVLL	9	Unmodified	_LSNLMKVLL_					0	0	0			REV__ENSG00000131183|ENST00000324417|SLC34A1	REV__ENSG00000131183|ENST00000324417|SLC34A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.8208495974541	2	515.820095	1029.62564	3.1398	0.0016196	-1.9929	-0.001028	1.1469	0.00059158	515.8190644471446	62.497	0.42403	63.911	63.679	64.103	1.4134					35	13	3	0	0	0	0.098163	1	26202	26202		49.933	0	1	5473100	+		20750	9815	10170	10209	23832	23832					0.11201021161787139
LSNLMKVLL	9	Unmodified	_LSNLMKVLL_					0	0	0			REV__ENSG00000131183|ENST00000324417|SLC34A1	REV__ENSG00000131183|ENST00000324417|SLC34A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8209106326103	2	515.820095	1029.62564	3.0633	0.0015801	-1.8759	-0.00096761	1.1875	0.00061252	515.8193203189346	61.919	0.40423	63.877	63.657	64.061	1.9571					32	12	3	0	0	0	0.049839	1	26004	26004		68.081	6.7232	1	3821000	+		20751	9815	10170	10209	23833	23833					0.11201021161787139
LSNRHKALI	9	Unmodified	_LSNRHKALI_					0	0	0			REV__EFCAB12|p.D288N|1|0.35|ENSG00000172771|chr3:129411331-129411331|C/T|missense_variant	REV__EFCAB12|p.D288N|1|0.35|ENSG00000172771|chr3:129411331-129411331|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2174865603447	3	351.217214	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.52	1	100.73	100.23	101.23	0.20527								0	0	0	0.42693	1	42269	42269		2.7352	0.23671	1		+		20752	8468	10171	10210	23834	23834					0.10652246699692114
LSNVCLVVI	9	Unmodified	_LSNVCLVVI_					0	0	0			REV__nc|ENSG00000137266|A1A5C7-3|SLC22A23	REV__nc|ENSG00000137266|A1A5C7-3|SLC22A23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2816955447197	2	480.283346	958.552139	2.9087	0.001397	-4.2225	-0.002028	-1.3137	-0.00063097	480.2812864754476	73.908	0.49159	75.704	75.409	75.9	1.7962					26	15	2	0	0	0	0.39927	1	31040	31040		20.454	3.5113	1	912760	+		20753	10017	10172	10211	23835	23835					0.07120472719293502
LSNWRVCC	8	Unmodified	_LSNWRVCC_					0	0	0		ENST00000581966.5_1_17:65715845-65715899:+|nuORF	ENST00000581966.5_1_17:65715845-65715899:+|nuORF	ENST00000581966.5_1_17:65715845-65715899:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.2559997439384	2	490.725672	979.436791	2.0737	0.0010176	-1.4511	-0.00071209	0.62265	0.00030555	490.7251497733863	38.937	0.37574	40.233	40.007	40.382	1.2961					19	11	2	0	0	0	2.3239	1	16277	16277		19.439	0	1	1188200			20754	7439	10173	10212	23836	23836					-0.053749546833387285
LSPAVVSTGV	10	Unmodified	_LSPAVVSTGV_					0	0	0		tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2710143923759	2	465.26875	928.522947	2.1755	0.0010122	2.9293	0.0013629	5.1048	0.0023751	465.27040313595325	93.935	0.40944	93.935	93.709	94.119	0					31	12	3	0	0	0	0.88022	1	39214	39214		3.5965	0	1	2219800			20755	17170	10174	10213	23837	23837					0.05582651694669494
LSPFLLPSPKD	11	Unmodified	_LSPFLLPSPKD_					0	0	0			REV__ENSG00000112144|ENST00000676107|CILK1	REV__ENSG00000112144|ENST00000676107|CILK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1791564822197	3	405.232418	1212.67542	1.4511	0.00058802	1.3026	0.00052784	2.7536	0.0011159	405.5678215548187	45.849	0.18795	47.225	47.146	47.334	1.3751					9	5	2	0	0	0	0.14606	1	19174	19174		0.50596	0.23694	1	325940	+		20756	9355	10175	10214	23838	23838					0.0775942737141122
LSPGGHKQ	8	Unmodified	_LSPGGHKQ_					0	0	0		ENST00000457166.5_1_7:66304900-66309725:-|nuORF	ENST00000457166.5_1_7:66304900-66309725:-|nuORF	ENST00000457166.5_1_7:66304900-66309725:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2266418337822	2	412.224677	822.434801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.839	1	24.053	23.553	24.553	1.2145								0	0	0	1.0178	1	9546	9546		5.2307	2.9279	1				20757	6647	10176	10215	23839	23839					0.01648075894718204
LSPIYNDTL	9	Unmodified	_LSPIYNDTL_					0	0	0			REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2737914919853	2	518.27149	1034.52843	2.8152	0.001459	2.8974	0.0015016	5.7126	0.0029607	518.2720937241833	72.333	0.49049	74.143	73.831	74.321	1.8101					40	15	4	0	0	0	0.39927	1	30362	30362		20.454	1.1966	1	4695800	+		20758	10374	10177	10216	23840	23840					0.012543304864720994
LSPIYNDTL	9	Unmodified	_LSPIYNDTL_					0	0	0			REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.27149	1034.52843	3.5665	0.0018484	3.5239	0.0018263	7.0904	0.0036747	518.2724216395167	72.769	0.46645	74.099	73.852	74.319	1.3298	-0.021893	0.00027129	NaN	20.454	37	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3436300	+		20759	10374	10177	10216							0.012543304864720994
LSPIYNDTL	9	Unmodified	_LSPIYNDTL_					0	0	0			REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	REV__ENST00000532981.1_1_11:125333376-125359673:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	518.27149	1034.52843	2.8152	0.001459	2.8974	0.0015016	5.7126	0.0029607	518.2720937241833	72.333	0.49049	74.143	73.831	74.321	1.8101	0.021893	-0.00037804	NaN	20.454	40	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4695800	+		20760	10374	10177	10216							0.012543304864720994
LSPKTKSSI	9	Unmodified	_LSPKTKSSI_					0	0	0		tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7915832400322	2	480.78985	959.565146	2.9687	0.0014273	-0.69225	-0.00033282	2.2764	0.0010945	480.7898040575266	62.123	0.31683	63.541	63.303	63.619	1.4177					16	9	3	0	0	0	0.6486	1	26022	26022		9.3831	0.78985	1	2238600			20761	16481	10178	10217	23841	23841					0.0837462710304635
LSPKTKSSI	9	Unmodified	_LSPKTKSSI_					0	0	0		tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	480.78985	959.565146	2.2458	0.0010797	-0.31919	-0.00015346	1.9266	0.00092627	480.79018453960276	63.558	0.18854	63.558	63.492	63.681	0	-0.00023042	0.00027513	NaN	9.3831	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	673500			20762	16481	10178	10217							0.0837462710304635
LSPKTKSSI	9	Unmodified	_LSPKTKSSI_					0	0	0		tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	tr|A0A553SPR8|A0A553SPR8_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26915PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	480.78985	959.565146	2.3289	0.0011197	-0.68602	-0.00032983	1.6429	0.00078988	480.78967220578886	61.62	0.28891	63.577	63.368	63.657	1.9571	0.018223	-7.761E-05	NaN	9.3831	14	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1275600			20763	16481	10178	10217							0.0837462710304635
LSPLREVVKPQ	11	Unmodified	_LSPLREVVKPQ_					0	0	0			REV__ENST00000550663.1_1_12:45457440-45457707:-|nuORF	REV__ENST00000550663.1_1_12:45457440-45457707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5932800173759	3	422.590717	1264.75032	1.7239	0.0007285	3.5968	0.00152	5.3207	0.0022485	422.59219667049217	35.708	0.2201	36.009	35.806	36.026	0.30197					34	20	2	0	0	0	1.0308	1	14962	14962		1.9275	0.33522	1	12585000	+		20764	13828	10179	10218	23842	23842					0.12853609902640528
LSPLRPCA	8	Unmodified	_LSPLRPCA_					0	0	0			REV__ENST00000392563.5_1_17:73314297-73314477:-|nuORF	REV__ENST00000392563.5_1_17:73314297-73314477:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	428.2630187869072	2	428.739105	855.463658	2.7932	0.0011975	3.3798	0.0014491	6.173	0.0026466	428.74075849655634	72.437	0.54939	73.767	73.455	74.004	1.3297					53	17	4	0	0	0	2.3239	1	30450	30450		1.8442	0	1	10329000	+		20765	12799	10180	10219	23843	23843					0.030144771994855546
LSPRLFFF	8	Unmodified	_LSPRLFFF_					0	0	0			REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8628112673759	3	342.863889	1025.56984	-1.9028	-0.0006524	0.018445	6.324E-06	-1.8844	-0.00064608	342.86385604084217	29.901	0.39896	29.901	29.67	30.069	0					37	12	4	0	0	0	0.88896	1	12496	12496		3.2813	3.2813	1	9769300	+		20766	12979	10181	10220	23844	23844					0.05807556036438655
LSPRLFFF	8	Unmodified	_LSPRLFFF_					0	0	0			REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8634216189384	3	342.863889	1025.56984	0.64639	0.00022162	-1.8775	-0.00064372	-1.2311	-0.0004221	342.8631649873456	29.567	0.4273	29.846	29.59	30.017	0.2793					41	13	4	0	0	0	0.88896	2	12337	12337;12384		3.2813	0.99853	1	7611400	+		20767	12979	10181	10220	23845;23846	23845					0.05807556036438655
LSPRLFFF	8	Unmodified	_LSPRLFFF_					0	0	0			REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	REV__ENST00000422370.2_1_19:45646780-45647155:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1980773806572	3	342.863889	1025.56984	-0.24254	-8.3159E-05	-1.6219	-0.00055608	-1.8644	-0.00063924	342.8632624806747	28.334	0.48612	29.613	29.335	29.821	1.2789					46	15	4	0	0	0	0.88896	1	11822	11822		3.2813	0.28607	1	6203400	+		20768	12979	10181	10220	23847	23847					0.05807556036438655
LSPRRFVV	8	Unmodified	_LSPRRFVV_					0	0	0		FLVCR1|p.I290Nfs*26|1|0.07|ENSG00000162769|chr1:212863851-212863855|TTTAT/-|frameshift_variant;ENSG00000162769|ENST00000366971|FLVCR1	FLVCR1|p.I290Nfs*26|1|0.07|ENSG00000162769|chr1:212863851-212863855|TTTAT/-|frameshift_variant	FLVCR1|p.I290Nfs*26|1|0.07|ENSG00000162769|chr1:212863851-212863855|TTTAT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3039123415947	2	487.300719	972.586885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.51	1	91.491	90.991	91.991	0.98157								0	0	0	1.0178	1	38133	38133		2.5775	0.27475	1				20769	3646	10182	10221	23848	23848					0.09949476642270838
LSPRWAPRRL	10	Unmodified	_LSPRWAPRRL_					0	0	0			REV__ENST00000495186.5_1_X:48382242-48385545:+|nuORF	REV__ENST00000495186.5_1_X:48382242-48385545:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9207641482353	3	417.919279	1250.73601	0.76201	0.00031846	2.7067	0.0011312	3.4687	0.0014497	417.9206287305811	29.391	0.33407	31.19	31.082	31.416	1.7987					24	10	3	0	0	0	0.88022	1	12325	12325		1.7423	0.78	1	2975000	+		20770	13457	10183	10222	23849	23849					0.12067002265030169
LSPSKVLEV	9	Unmodified	_LSPSKVLEV_					0	0	0		tr|A0A553SNZ3|A0A553SNZ3_NIACITranscriptiontermination/antiterminationproteinNusAOS=NialliacirculansOX=1397GN=nusAPE=3SV=1	tr|A0A553SNZ3|A0A553SNZ3_NIACITranscriptiontermination/antiterminationproteinNusAOS=NialliacirculansOX=1397GN=nusAPE=3SV=1	tr|A0A553SNZ3|A0A553SNZ3_NIACITranscriptiontermination/antiterminationproteinNusAOS=NialliacirculansOX=1397GN=nusAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2938110232353	2	486.292225	970.569897	1.8557	0.00090242	-0.13034	-6.3381E-05	1.7254	0.00083904	486.29205830142314	42.942	0.23541	44.863	44.694	44.929	1.9211					12	7	2	0	0	0	0.48482	1	17978	17978		16.149	1.3108	1	981670			20771	16443	10184	10223	23850	23850					0.08343511245811897
LSPSPVLLEL	10	Unmodified	_LSPSPVLLEL_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.3265258669853	2	534.320983	1066.62741	5.6942	0.0030425	1.2727	0.00068002	6.9669	0.0037225	534.3222287557556	89.123	0.51668	90.143	89.784	90.3	1.0199					33	15	3	0	0	0	0.35292	1	37586	37586		36.127	8.4982	1	2694300	+		20772	11884	10185	10224	23851	23851					0.09676353451368414
LSPSPVLLEL	10	Unmodified	_LSPSPVLLEL_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.3256103396416	2	534.320983	1066.62741	4.9053	0.002621	2.7625	0.0014761	7.6678	0.0040971	534.3232286812027	88.682	0.48132	90.129	89.825	90.306	1.4467					33	14	4	0	0	0	0.35292	1	37375	37375		36.127	5.4905	1	3728100	+		20773	11884	10185	10224	23852	23852					0.09676353451368414
LSPSPVLLEL	10	Unmodified	_LSPSPVLLEL_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	534.320983	1066.62741	2.2286	0.0011908	3.7945	0.0020275	6.0231	0.0032183	534.3233889334358	90.445	0.33794	90.445	90.193	90.531	0	0.23028	0.0011215	NaN	36.127	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1474100	+		20774	11884	10185	10224							0.09676353451368414
LSPSPVLLEL	10	Unmodified	_LSPSPVLLEL_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.320983	1066.62741	2.7132	0.0014497	4.1988	0.0022435	6.912	0.0036932	534.3239243558627	89.933	0.35515	90.142	89.92	90.275	0.20904	-0.073149	0.0015536	NaN	36.127	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1106800	+		20775	11884	10185	10224							0.09676353451368414
LSPSPVLLEL	10	Unmodified	_LSPSPVLLEL_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	534.320983	1066.62741	4.9053	0.002621	2.7625	0.0014761	7.6678	0.0040971	534.3232286812027	88.682	0.48132	90.129	89.825	90.306	1.4467	-0.085718	1.8717E-05	NaN	36.127	33	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3728100	+		20776	11884	10185	10224							0.09676353451368414
LSPTSPLLN	9	Unmodified	_LSPTSPLLN_					0	0	0		ENST00000560168.1_1_19:46269581-46272089:-|nuORF;ENSG00000177045|ENST00000317578|SIX5	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	941.5347167849541	1	941.530224	940.522947	1.9603	0.0018457	0.3145	0.00029611	2.2748	0.0021418	941.5305598757054	65.3	0.41309	65.627	65.388	65.801	0.32689					30	12	3	0	0	0	0.045797	1	27292	27292		71.134	9.7761	1	3518000			20777	4430	10186	10225	23853	23853					0.05030651694664812
LSPTSPLLN	9	Unmodified	_LSPTSPLLN_					0	0	0		ENST00000560168.1_1_19:46269581-46272089:-|nuORF;ENSG00000177045|ENST00000317578|SIX5	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2707702517509	2	471.26875	940.522947	2.9139	0.0013732	0.10123	4.7707E-05	3.0152	0.001421	471.2687754535121	64.198	0.52872	65.605	65.272	65.801	1.4071					48	16	4	0	0	0	0.15635	1	26839	26839		37.974	5.6685	1	12069000			20778	4430	10186	10225	23854	23854					0.05030651694664812
LSPTSPLLN	9	Unmodified	_LSPTSPLLN_					0	0	0		ENST00000560168.1_1_19:46269581-46272089:-|nuORF;ENSG00000177045|ENST00000317578|SIX5	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	ENST00000560168.1_1_19:46269581-46272089:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2694885134697	2	471.26875	940.522947	3.1464	0.0014828	-0.076337	-3.5975E-05	3.07	0.0014468	471.2686549580197	63.609	0.49975	65.553	65.312	65.812	1.9444					50	15	4	0	0	0	0.042029	1	26650	26650		74.423	7.0789	1	11215000			20779	4430	10186	10225	23855	23855					0.05030651694664812
LSPWPADLEKQ	11	Unmodified	_LSPWPADLEKQ_					0	0	0		ENST00000466480.1_1_1:114448336-114454776:+|nuORF;ENSG00000118655|ENST00000650450|DCLRE1B	ENST00000466480.1_1_1:114448336-114454776:+|nuORF	ENST00000466480.1_1_1:114448336-114454776:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3374511599541	2	642.335153	1282.65575	2.1304	0.0013684	-2.3857	-0.0015324	-0.2553	-0.00016399	642.3337403425614	44.573	0.25234	45.938	45.804	46.056	1.3653					12	7	2	0	0	0	0.91768	1	18698	18698		8.7454	2.5396	1	793660			20780	2043	10187	10226	23856	23856					0.025730513606504246
LSPWPADLEKQ	11	Unmodified	_LSPWPADLEKQ_					0	0	0		ENST00000466480.1_1_1:114448336-114454776:+|nuORF;ENSG00000118655|ENST00000650450|DCLRE1B	ENST00000466480.1_1_1:114448336-114454776:+|nuORF	ENST00000466480.1_1_1:114448336-114454776:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	642.335153	1282.65575	2.0067	0.001289	-2.8587	-0.0018362	-0.852	-0.00054727	642.3330252860463	43.965	0.28648	45.909	45.767	46.053	1.9438	-0.014461	-0.00015809	NaN	8.7454	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	935130			20781	2043	10187	10226							0.025730513606504246
LSQAPLLQL	9	Unmodified	_LSQAPLLQL_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.8009826540947	2	491.800217	981.585882	2.1035	0.0010345	-1.0025	-0.00049304	1.101	0.00054145	491.7995864860522	41.846	0.36308	43.172	42.973	43.336	1.3254					21	11	2	0	0	0	0.20145	1	17555	17555		41.956	2.0059	1	1111500	+		20782	10302	10188	10227	23857	23857					0.09435217482700864
LSQAPLLQL	9	Unmodified	_LSQAPLLQL_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	491.800217	981.585882	2.1035	0.0010345	-1.0025	-0.00049304	1.101	0.00054145	491.7995864860522	41.846	0.36308	43.172	42.973	43.336	1.3254	-0.060405	0.00025341	NaN	41.956	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1111500	+		20783	10302	10188	10227							0.09435217482700864
LSQAPLLQL	9	Unmodified	_LSQAPLLQL_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	491.800217	981.585882	2.0475	0.0010069	-2.0273	-0.000997	0.020222	9.945E-06	491.7988192474286	41.4	0.2371	43.293	43.088	43.325	1.8927	0.060405	-0.00075452	NaN	41.956	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621510	+		20784	10302	10188	10227							0.09435217482700864
LSQATPNNSM	10	Unmodified	_LSQATPNNSM_					0	0	0			REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	REV__nc|ENSG00000135049|Q9UPW5-2|AGTPBP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	532.2944213747978	2	531.747856	1061.48116	2.9393	0.001563	-2.8587	-0.0015201	0.080651	4.2886E-05	531.7454436036202	62.397	0.21551	63.815	63.747	63.963	1.4177					9	6	2	0	0	0	0.12357	1	26164	26164		21.537	0	1	1007400	+		20785	9928	10189	10228	23858	23858					-0.04712272056190159
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2620117068291	2	470.260925	938.507297	2.671	0.0012561	-3.2871	-0.0015458	-0.61615	-0.00028975	470.25946620260294	61.82	0.28365	61.82	61.645	61.929	0					12	8	2	0	0	0	0.1388	1	25742	25742		39.95	9.3132	1	729450	+		20786	8460	10190	10229	23859	23859					0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	470.2607299685478	2	470.260925	938.507297	2.7905	0.0013123	-2.1111	-0.00099275	0.67942	0.00031951	470.2597764658782	61.249	0.31297	61.578	61.422	61.735	0.32974					16	9	2	0	0	0	0.1388	1	25640	25640		39.95	9.3132	1	930630	+		20787	8460	10190	10229	23860	23860					0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.2608520388603	2	470.260925	938.507297	2.815	0.0013238	-2.3782	-0.0011184	0.43672	0.00020537	470.25980225125465	60.132	0.42109	61.552	61.358	61.779	1.4196					23	13	2	0	0	0	0.093059	1	25236	25236		51.63	17.228	1	4709900	+		20788	8460	10190	10229	23861	23861					0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2607299685478	2	470.260925	938.507297	3.213	0.001511	-3.1778	-0.0014944	0.035205	1.6556E-05	470.25952667016867	59.649	0.38972	61.619	61.405	61.794	1.969					26	12	3	0	0	0	0.093059	1	25028	25028		51.63	11.68	1	4551800	+		20789	8460	10190	10229	23862	23862					0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	470.260925	938.507297	2.671	0.0012561	-3.2871	-0.0015458	-0.61615	-0.00028975	470.25946620260294	61.82	0.28365	61.82	61.645	61.929	0	0.1774	-0.00054779	NaN	51.63	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729450	+		20790	8460	10190	10229							0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	470.260925	938.507297	2.7905	0.0013123	-2.1111	-0.00099275	0.67942	0.00031951	470.2597764658782	61.249	0.31297	61.578	61.422	61.735	0.32974	-0.063714	0.00055831	NaN	51.63	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930630	+		20791	8460	10190	10229							0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	470.260925	938.507297	2.815	0.0013238	-2.3782	-0.0011184	0.43672	0.00020537	470.25980225125465	60.132	0.42109	61.552	61.358	61.779	1.4196	-0.090116	0.00030701	NaN	51.63	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4709900	+		20792	8460	10190	10229							0.035583651776164515
LSQEPPIGV	9	Unmodified	_LSQEPPIGV_					0	0	0			REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	REV__ENST00000415792.5_1_2:114670765-114697700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	470.260925	938.507297	3.213	0.001511	-3.1778	-0.0014944	0.035205	1.6556E-05	470.25952667016867	59.649	0.38972	61.619	61.405	61.794	1.969	-0.023571	-0.00044502	NaN	51.63	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4551800	+		20793	8460	10190	10229							0.035583651776164515
LSQGWIRCN	9	Unmodified	_LSQGWIRCN_					0	0	0		nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	538.8155395388603	2	538.768926	1075.5233	2.9324	0.0015799	2.596	0.0013987	5.5285	0.0029786	538.7704432409604	69.802	0.37796	71.64	71.309	71.687	1.8378					16	11	2	0	0	0	0.098208	1	29212	29212		24.021	2.2739	1	661580			20794	7885	10191	10230	23863	23863					-0.011442518571357141
LSQGWIRCN	9	Unmodified	_LSQGWIRCN_					0	0	0		nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	nc|ENSG00000141219|Q9BSJ5-2|MTNAP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	538.768926	1075.5233	3.0719	0.001655	3.3804	0.0018213	6.4523	0.0034763	538.770791411437	70.326	0.31461	71.68	71.46	71.775	1.3536	0.020028	0.00045735	NaN	24.021	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629690			20795	7885	10191	10230							-0.011442518571357141
LSQIQDTRV	9	Unmodified	_LSQIQDTRV_					0	0	0			REV__ENST00000540847.6_1_18:13073121-13088876:+|nuORF	REV__ENST00000540847.6_1_18:13073121-13088876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2957641482353	2	530.293288	1058.57202	3.2184	0.0017067	-1.7715	-0.00093939	1.4469	0.0007673	530.2931477127432	73.983	0.26988	75.78	75.687	75.957	1.7962					20	8	3	0	0	0	0.39927	1	31066	31066		20.454	2.3073	1	1954300	+		20796	13782	10192	10231	23864	23864					0.04507939983614051
LSQIVIEDI	9	Unmodified	_LSQIVIEDI_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.7491332888603	2	515.294965	1028.57538	2.6002	0.0013399	-3.7754	-0.0019454	-1.1752	-0.00060557	515.7948468800558	80.854	0.2458	82.55	82.394	82.64	1.6959					10	7	2	0	0	0	0.10844	1	33950	33950		16.942	0	1	261070			20797	3957	10193	10232	23865	23865					0.062231900375991245
LSQIVIEDI	9	Unmodified	_LSQIVIEDI_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.294965	1028.57538	3.4203	0.0017625	-1.2033	-0.00062004	2.217	0.0011424	515.2945488014667	81.233	0.15426	82.466	82.348	82.502	1.2332	-0.041752	0.002006	NaN	16.942	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306440			20798	3957	10193	10232							0.062231900375991245
LSQLFLMDL	9	Unmodified	_LSQLFLMDL_					0	0	0		OR2M5|p.M284Sfs*10|1|0.11|ENSG00000162727|chr1:248145994-248146006|CCCATGCTGAATC/-|frameshift_variant;ENSG00000162727|ENST00000366476|OR2M5	OR2M5|p.M284Sfs*10|1|0.11|ENSG00000162727|chr1:248145994-248146006|CCCATGCTGAATC/-|frameshift_variant	OR2M5|p.M284Sfs*10|1|0.11|ENSG00000162727|chr1:248145994-248146006|CCCATGCTGAATC/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	540.3352538943291	2	540.293911	1078.57327	1.0963	0.00059233	0.31	0.00016749	1.4063	0.00075983	540.2951323105253	71.01	0.15344	72.834	72.697	72.85	1.824					6	4	2	0	0	0	0.091909	1	29797	29797		14.838	0	1	165080			20799	3641	10194	10233	23866	23866					0.03712438028151155
LSQLLIKIHF	10	Unmodified	_LSQLLIKIHF_					0	0	0			REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	REV__ENST00000461741.1_1_7:48075147-48081223:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1791869997978	3	404.588536	1210.74378	0.73809	0.00029862	1.6652	0.00067373	2.4033	0.00097235	404.58896172262695	22.092	0.55101	23.269	23.052	23.603	1.177					43	17	3	0	0	0	0.12555	1	9345	9345		0.77653	0	1	1104700	+		20800	13201	10195	10234	23867	23867					0.14683716741910757
LSQNKPKA	8	Unmodified	_LSQNKPKA_					0	0	0		nc|ENSG00000153563|P01732-2|CD8A;ENSG00000153563|ENST00000283635|CD8A;nc|ENSG00000153563|P01732-3|CD8A	nc|ENSG00000153563|P01732-2|CD8A	nc|ENSG00000153563|P01732-2|CD8A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	443.3026611208916	2	443.261259	884.507966	2.8745	0.0012742	-1.6523	-0.00073241	1.2222	0.00054175	443.26024618800017	75.733	0.78439	76.055	75.519	76.303	0.32163					36	24	3	0	0	0	2.3239	1	31748	31748		0.6015	0.6015	1	1065200			20801	3362	10196	10235	23868	23868					0.0610920461731439
LSQNKPKA	8	Unmodified	_LSQNKPKA_					0	0	0		nc|ENSG00000153563|P01732-2|CD8A;ENSG00000153563|ENST00000283635|CD8A;nc|ENSG00000153563|P01732-3|CD8A	nc|ENSG00000153563|P01732-2|CD8A	nc|ENSG00000153563|P01732-2|CD8A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	443.261259	884.507966	1.5401	0.00068269	4.1437	0.0018367	5.6838	0.0025194	443.2633867168932	76.078	0.40252	76.078	75.852	76.254	0	0.011298	0.0044665	NaN	0.6015	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	796000			20802	3362	10196	10235							0.0610920461731439
LSQNPLTYLL	10	Unmodified	_LSQNPLTYLL_					0	0	0		nc|ENSG00000029153|Q8WYA1-7|BMAL2;nc|ENSG00000029153|Q8WYA1-2|BMAL2;ENSG00000029153|ENST00000266503|BMAL2	nc|ENSG00000029153|Q8WYA1-7|BMAL2	nc|ENSG00000029153|Q8WYA1-7|BMAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1161.652026355267	1	1161.6514	1160.64412	1.9127	0.0022219	-1.7235	-0.0020021	0.18923	0.00021982	1161.6476303432687	64.364	0.22034	66.292	66.202	66.422	1.928					11	6	2	0	0	0	0.82659	1	27048	27048		9.3831	0	1	361550			20803	632	10197	10236	23869	23869					0.07022854337310491
LSQNPLTYLL	10	Unmodified	_LSQNPLTYLL_					0	0	0		nc|ENSG00000029153|Q8WYA1-7|BMAL2;nc|ENSG00000029153|Q8WYA1-2|BMAL2;ENSG00000029153|ENST00000266503|BMAL2	nc|ENSG00000029153|Q8WYA1-7|BMAL2	nc|ENSG00000029153|Q8WYA1-7|BMAL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1161.6514	1160.64412	2.7063	0.0031438	-2.4287	-0.0028213	0.27766	0.00032254	1161.648345887878	64.906	0.24938	66.305	66.162	66.411	1.3989	0.006305	-0.00016253	NaN	9.3831	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	509690			20804	632	10197	10236							0.07022854337310491
LSQRLQKT	8	Unmodified	_LSQRLQKT_					0	0	0		SLC36A3|p.P355Qfs*16|1|0.05|ENSG00000186334|chr5:151281094-151281095|-/CT|frameshift_variant;SLC36A3|p.P355Afs*23|1|0.05|ENSG00000186334|chr5:151281095-151281096|-/CACTCCAGTCTGGGCAACAGAGC|frameshift_variant;nc|ENSG00000186334|Q495N2-2|SLC36A3;ENSG00000186334|ENST00000335230|SLC36A3;nc|ENSG00000186334|Q495N2-3|SLC36A3	SLC36A3|p.P355Qfs*16|1|0.05|ENSG00000186334|chr5:151281094-151281095|-/CT|frameshift_variant	SLC36A3|p.P355Qfs*16|1|0.05|ENSG00000186334|chr5:151281094-151281095|-/CT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2955810427666	2	487.293091	972.571629	1.7439	0.00084981	0.81387	0.0003966	2.5578	0.0012464	487.293674029514	73.657	0.61375	73.657	73.433	74.047	0					37	19	3	0	0	0	0.89051	2	30786	30653;30786		2.3027	0	1	1786900			20805	4787	10198	10237	23870;23871	23871					0.08424565054417599
LSRALGTGGAP	11	Unmodified	_LSRALGTGGAP_					0	0	0		ENSG00000125998|ENST00000374408|FAM83C	ENSG00000125998|ENST00000374408|FAM83C	ENSG00000125998|ENST00000374408|FAM83C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2897827029228	2	500.282723	998.550893	2.0492	0.0010252	2.5148	0.0012581	4.564	0.0022833	500.283493935118	68.873	0.94243	69.196	68.936	69.878	0.32224					64	29	4	0	0	0	0.97491	1	28933	28933		5.2969	0.066215	1	2694100			20806	2296	10199	10238	23872	23872					0.05155974674767094
LSRAREKSS	9	Unmodified	_LSRAREKSS_					0	0	0		tr|A0A553SQU8|A0A553SQU8_NIACIConjugaltransferproteinOS=NialliacirculansOX=1397GN=CEQ21_07300PE=3SV=1	tr|A0A553SQU8|A0A553SQU8_NIACIConjugaltransferproteinOS=NialliacirculansOX=1397GN=CEQ21_07300PE=3SV=1	tr|A0A553SQU8|A0A553SQU8_NIACIConjugaltransferproteinOS=NialliacirculansOX=1397GN=CEQ21_07300PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2926513552666	2	517.291079	1032.56761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.61	1	54.931	54.431	55.431	0.32088								0	0	0	0.3792	1	22869	22869		10.824	4.1008	1				20807	16531	10200	10239	23873	23873					0.05262475560698476
LSRDWPRR	8	Unmodified	_LSRDWPRR_					0	0	0			REV__ENSG00000146966|ENST00000496613|DENND2A	REV__ENSG00000146966|ENST00000496613|DENND2A	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3037597537041	2	543.301781	1084.58901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.725	1	41.725	41.225	42.225	0								0	0	0	1.0178	1	17466	17466		2.5775	0	1		+		20808	10319	10201	10240	23874	23874					0.05009905380074997
LSRFRHPNIVD	11	Unmodified	_LSRFRHPNIVD_					0	0	0		ENST00000477274.1_1_X:153276255-153284091:-|nuORF;nc|ENSG00000184216|P51617-4|IRAK1;nc|ENSG00000184216|P51617-2|IRAK1;nc|ENSG00000184216|P51617-3|IRAK1;ENSG00000184216|ENST00000369980|IRAK1	ENST00000477274.1_1_X:153276255-153284091:-|nuORF	ENST00000477274.1_1_X:153276255-153284091:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	677.4293090701103	2	677.372935	1352.73132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.51	105.01	106.01	0.15859								0	0	0	0.63775	1	44853	44853		4.897	1.3005	1				20809	4684	10202	10241	23875	23875					0.06906073331606422
LSRIIHML	8	Unmodified	_LSRIIHML_					0	0	0		ENST00000424326.5_1_2:167262092-167297919:-|nuORF;ENSG00000136546|ENST00000643258|SCN7A	ENST00000424326.5_1_2:167262092-167297919:-|nuORF	ENST00000424326.5_1_2:167262092-167297919:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2998535037041	2	491.796955	981.579357	0.73599	0.00036196	-1.2926	-0.0006357	-0.55663	-0.00027375	491.79571632536596	31.233	0.52199	32.514	32.343	32.865	1.2813					33	16	3	0	0	0	0.89008	1	13224	13224		2.5775	0.27475	1	2826600			20810	2730	10203	10242	23876	23876					0.08783001050335315
LSRKISTTVE	10	Unmodified	_LSRKISTTVE_					0	0	0			REV__tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	REV__tr|A0A7D6VRY9|A0A7D6VRY9_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_13950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8320190310478	2	567.32987	1132.64519	2.7597	0.0015657	0.97486	0.00055307	3.7346	0.0021187	567.3306304083815	75.234	0.76951	77.015	76.608	77.377	1.7817					68	24	4	0	0	0	0.77604	1	31584	31584		14.838	0	1	1861500	+		20811	15430	10204	10243	23877	23877					0.08417068706239661
LSRLARRHRS	10	Unmodified	_LSRLARRHRS_					0	0	0			REV__ENST00000473391.1_1_7:150067121-150067265:+|nuORF	REV__ENST00000473391.1_1_7:150067121-150067265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9211608767509	3	417.921683	1250.74322	0.28031	0.00011715	-0.74814	-0.00031266	-0.46783	-0.00019552	417.9212062468807	30.646	0.54891	30.646	30.347	30.896	0					60	17	4	0	0	0	0.89803	1	12866	12866		1.1098	0.14748	1	7871500	+		20812	13303	10205	10244	23878	23878					0.1278773486544651
LSRLFRTV	8	Unmodified	_LSRLFRTV_					0	0	0		ENSG00000249961|ENST00000433154|TERB1;nc|ENSG00000249961|Q8NA31-3|TERB1;nc|ENSG00000249961|Q8NA31-2|TERB1	ENSG00000249961|ENST00000433154|TERB1	ENSG00000249961|ENST00000433154|TERB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3059570193291	2	496.306001	990.597449	2.9857	0.0014818	-2.0616	-0.0010232	0.92405	0.00045861	496.3050774301059	65.218	0.71728	66.617	66.193	66.91	1.3989					35	22	2	0	0	0	0.88504	1	27452	27452		5.7604	0	1	4623100			20813	5378	10206	10245	23879	23879					0.1017745929668763
LSRMKFFV	8	Unmodified	_LSRMKFFV_					0	0	0			REV__ENST00000511003.1_1_3:139353226-139353487:-|nuORF	REV__ENST00000511003.1_1_3:139353226-139353487:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.7886230349541	2	514.291505	1026.56846	3.2612	0.0016772	-3.6625	-0.0018836	-0.4013	-0.00020639	514.2901468375302	63.87	0.24594	65.798	65.674	65.919	1.928					10	7	2	0	0	0	2.3239	1	26812	26812		2.5775	0	1	902870	+		20814	13570	10207	10246	23880	23880					0.05623598676061192
LSRMKNFL	8	Unmodified	_LSRMKNFL_					0	0	0			REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7888061404228	2	504.786587	1007.55862	4.3496	0.0021956	1.1863	0.00059884	5.5359	0.0027944	504.78842871354703	90.79	0.48069	91.771	91.525	92.006	0.98156					20	14	2	0	0	0	0.87803	1	38279	38279		10.183	0.83596	1	556020	+		20815	12278	10208	10247	23881	23881					0.05514410670673442
LSRMKNFL	8	Unmodified	_LSRMKNFL_					0	0	0			REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.786587	1007.55862	4.3496	0.0021956	1.1863	0.00059884	5.5359	0.0027944	504.78842871354703	90.79	0.48069	91.771	91.525	92.006	0.98156	0.0099237	0.0012042	NaN	10.183	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556020	+		20816	12278	10208	10247							0.05514410670673442
LSRMKNFL	8	Unmodified	_LSRMKNFL_					0	0	0			REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	REV__ENST00000289968.10_1_16:24930781-24931099:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	504.786587	1007.55862	3.8454	0.0019411	-0.64292	-0.00032454	3.2024	0.0016165	504.78670726110954	90.385	0.2902	91.751	91.607	91.897	1.366	-0.0099237	-0.00064253	NaN	10.183	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1383600	+		20817	12278	10208	10247							0.05514410670673442
LSRPLYYTA	9	Unmodified	_LSRPLYYTA_					0	0	0		nc|ENSG00000176842|P78411-3|IRX5;ENST00000558597.1_2_16:54966274-54967782:+|nuORF;nc|ENSG00000176842|P78411-2|IRX5;ENSG00000176842|ENST00000394636|IRX5	nc|ENSG00000176842|P78411-3|IRX5	nc|ENSG00000176842|P78411-3|IRX5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3016845583916	2	542.295299	1082.57605	1.9202	0.0010413	2.6215	0.0014216	4.5416	0.0024629	542.2967968392832	44.876	0.25679	46.836	46.703	46.96	1.9596					11	7	2	0	0	0	0.53525	2	18796	18796;18846		13.906	2.2658	1	767340			20818	4420	10209	10248	23882;23883	23882					0.03806029477323136
LSRPWKWLFF	10	Unmodified	_LSRPWKWLFF_					0	0	0		ENST00000262031.9_2_12:56983630-56983771:+|nuORF	ENST00000262031.9_2_12:56983630-56983771:+|nuORF	ENST00000262031.9_2_12:56983630-56983771:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	460.2917053103447	3	460.592281	1378.75501	3.3906	0.0015617	-3.7062	-0.0017071	-0.31566	-0.00014539	460.5907497433519	60.67	0.30435	62.635	62.577	62.881	1.9653					11	9	2	0	0	0	0.12559	1	25557	25557		0.15932	0.064481	1	447970			20819	5629	10210	10249	23884	23884					0.0807853883604821
LSRQAEATVL	10	Unmodified	_LSRQAEATVL_					0	0	0		CNTROB|p.A52Vfs*22|1|0.03|ENSG00000170037|chr17:7933231-7933232|-/GGTTTTGAGCGTAG|frameshift_variant	CNTROB|p.A52Vfs*22|1|0.03|ENSG00000170037|chr17:7933231-7933232|-/GGTTTTGAGCGTAG|frameshift_variant	CNTROB|p.A52Vfs*22|1|0.03|ENSG00000170037|chr17:7933231-7933232|-/GGTTTTGAGCGTAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3119384646416	2	544.308938	1086.60332	2.3133	0.0012591	2.1816	0.0011875	4.4949	0.0024466	544.3101773674182	57.254	0.39474	57.575	57.395	57.79	0.32103					31	14	3	0	0	0	0.38174	1	24067	24067		34.402	1.616	1	4830900			20820	319	10211	10250	23885	23885					0.0634851301767867
LSRQHKPRL	9	Unmodified	_LSRQHKPRL_					0	0	0		ENST00000413663.1_1_3:43526466-43526670:-|nuORF	ENST00000413663.1_1_3:43526466-43526670:-|nuORF	ENST00000413663.1_1_3:43526466-43526670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8447143435478	2	567.846356	1133.67816	2.2571	0.0012817	-1.838	-0.0010437	0.41904	0.00023795	567.8459281354867	85.654	0.71606	85.654	85.323	86.039	0					35	22	2	0	0	0	0.83753	1	35629	35629		1.8442	0	1	673890			20821	6395	10212	10251	23886	23886					0.11666740339592252
LSRQKHHLA	9	Unmodified	_LSRQKHHLA_					0	0	0			REV__ENST00000417709.5_1_22:46663914-46665043:+|nuORF	REV__ENST00000417709.5_1_22:46663914-46665043:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3191406130791	2	545.317432	1088.62031	2.3261	0.0012685	0.2022	0.00011026	2.5283	0.0013787	545.3173703630918	87.567	0.3809	87.567	87.378	87.759	0					31	12	3	0	0	0	0.85068	1	36656	36656		0.45834	0	1	7208500	+		20822	12766	10213	10252	23887	23887					0.07954478414194455
LSRQRPKIRPY	11	Unmodified	_LSRQRPKIRPY_					0	0	0			REV__ATG16L2-TP53BP2|1|fusion	REV__ATG16L2-TP53BP2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2891113162041	3	471.95276	1412.83645	2.3001	0.0010856	-0.79922	-0.0003772	1.5009	0.00070836	472.286972728857	94.513	0.33402	94.513	94.337	94.671	0					20	10	3	0	0	0	1.0391	1	39505	39505		0.40827	0.24894	1	798890	+		20823	8147	10214	10253	23888	23888					0.14654614528012644
LSRQRPKIRPY	11	Unmodified	_LSRQRPKIRPY_					0	0	0			REV__ATG16L2-TP53BP2|1|fusion	REV__ATG16L2-TP53BP2|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	471.95276	1412.83645	2.3001	0.0010856	-0.79922	-0.0003772	1.5009	0.00070836	472.286972728857	94.513	0.33402	94.513	94.337	94.671	0	-0.10511	0.0018416	NaN	0.40827	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	798890	+		20824	8147	10214	10253							0.14654614528012644
LSRQRPKIRPY	11	Unmodified	_LSRQRPKIRPY_					0	0	0			REV__ATG16L2-TP53BP2|1|fusion	REV__ATG16L2-TP53BP2|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	471.95276	1412.83645	3.6029	0.0017004	-2.847	-0.0013436	0.75598	0.00035679	471.95122763161754	93.428	0.37541	94.705	94.484	94.859	1.277	0.086958	-0.0010577	NaN	0.40827	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411060	+		20825	8147	10214	10253							0.14654614528012644
LSRQVPHPR	9	Unmodified	_LSRQVPHPR_					0	0	0		ENST00000534320.5_1_11:607207-607396:+|nuORF	ENST00000534320.5_1_11:607207-607396:+|nuORF	ENST00000534320.5_1_11:607207-607396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3181640505791	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.7849	1	30002	30002		3.9444	0	1	5427600			20826	7188	10215	10254	23889	23889					0.07954478414171717
LSRRVLRDVRR	11	Unmodified	_LSRRVLRDVRR_					0	0	0		nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;ENST00000482398.1_1_9:134404264-134404527:-|nuORF	nc|ENSG00000130717|Q9HA47-3|UCK1	nc|ENSG00000130717|Q9HA47-3|UCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4539672732353	2	713.4473	1424.88005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.82	1	116.97	116.47	117.47	0.15228								0	0	0	0.63775	1	50473	50473		1.3295	0	1				20827	2454	10216	10255	23890	23890					0.1846022402514791
LSRRVLRDVRR	11	Unmodified	_LSRRVLRDVRR_					0	0	0		nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;ENST00000482398.1_1_9:134404264-134404527:-|nuORF	nc|ENSG00000130717|Q9HA47-3|UCK1	nc|ENSG00000130717|Q9HA47-3|UCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4480468630791	2	713.4473	1424.88005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.62	1	117.78	117.28	118.28	0.15606								0	0	0	0.63775	1	50799	50799		1.3295	0	1				20828	2454	10216	10255	23891	23891					0.1846022402514791
LSRRVLRDVRR	11	Unmodified	_LSRRVLRDVRR_					0	0	0		nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;ENST00000482398.1_1_9:134404264-134404527:-|nuORF	nc|ENSG00000130717|Q9HA47-3|UCK1	nc|ENSG00000130717|Q9HA47-3|UCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4493896365166	2	713.4473	1424.88005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.61	1	118.77	118.27	119.27	0.16237								0	0	0	0.63775	1	51200	51200		1.3295	0	1				20829	2454	10216	10255	23892	23892					0.1846022402514791
LSRRVLRDVRR	11	Unmodified	_LSRRVLRDVRR_					0	0	0		nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;ENST00000482398.1_1_9:134404264-134404527:-|nuORF	nc|ENSG00000130717|Q9HA47-3|UCK1	nc|ENSG00000130717|Q9HA47-3|UCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4528686404228	2	713.4473	1424.88005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.81	1	118.97	118.47	119.47	0.16237								0	0	0	0.63775	1	51280	51280		1.3295	0	1				20830	2454	10216	10255	23893	23893					0.1846022402514791
LSRWDIRV	8	Unmodified	_LSRWDIRV_					0	0	0		ENST00000465215.1_1_3:101659750-101679293:+|nuORF	ENST00000465215.1_1_3:101659750-101679293:+|nuORF	ENST00000465215.1_1_3:101659750-101679293:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.2723876833916	2	522.801083	1043.58761	1.0503	0.00054912	-2.5555	-0.001336	-1.5051	-0.00078688	522.7980257326975	52.569	0.28906	54.541	54.416	54.705	1.9722					13	8	2	0	0	0	2.3239	1	22082	22082		7.2892	0	1	1099500			20831	6697	10217	10256	23894	23894					0.06756271291305893
LSRWQRRLRRA	11	Unmodified	_LSRWQRRLRRA_					0	0	0		ENSG00000133980|ENST00000256362|VRTN	ENSG00000133980|ENST00000256362|VRTN	ENSG00000133980|ENST00000256362|VRTN	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.6237670779228	2	749.452917	1496.89128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.609	1	95.609	95.109	96.109	0								0	0	0	0.63775	1	39963	39963		1.3295	0.9789	1				20832	2589	10218	10257	23895	23895					0.16271046119277344
LSSAPYYKGK	10	Unmodified	_LSSAPYYKGK_					0	0	0			REV__ENST00000264645.11_1_17:38327614-38327764:+|nuORF	REV__ENST00000264645.11_1_17:38327614-38327764:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2992431521416	2	557.300581	1112.58661	2.5413	0.0014163	0.0069829	3.8916E-06	2.5483	0.0014202	557.3007965464117	63.482	0.25734	65.426	65.216	65.473	1.9444					11	7	2	0	0	0	0.35292	1	26615	26615		36.127	4.8587	1	6093600	+		20833	12215	10219	10258	23896	23896					0.03482012131757983
LSSCKCSRS	9	Unmodified	_LSSCKCSRS_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|346|3|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|346|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7263671755791	2	485.725869	969.437185	2.7194	0.0013209	-1.6072	-0.00078067	1.1122	0.0005402	485.72520908926697	60.128	0.4517	61.548	61.328	61.779	1.4196					36	14	3	0	0	0	0.51189	2	25209	25209;25260		14.838	1.3304	1	7656400	+		20834	14260	10220	10259	23897;23898	23897					-0.04875579754150294
LSSCKCSRS	9	Unmodified	_LSSCKCSRS_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|346|3|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|346|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	485.725869	969.437185	2.7194	0.0013209	-1.6072	-0.00078067	1.1122	0.0005402	485.72520908926697	60.128	0.4517	61.548	61.328	61.779	1.4196	-0.098434	0.00056433	NaN	14.838	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7656400	+		20835	14260	10220	10259							-0.04875579754150294
LSSHDCWR	8	Unmodified	_LSSHDCWR_					0	0	0			REV__nc|ENSG00000142494|Q96FL8-3|SLC47A1	REV__nc|ENSG00000142494|Q96FL8-3|SLC47A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2232849001884	2	502.224351	1002.43415	1.8574	0.00093282	-2.2704	-0.0011403	-0.41305	-0.00020745	502.2222580781978	55.74	0.22315	55.74	55.656	55.88	0					9	7	2	0	0	0	0.88663	1	23210	23210		4.756	0.42677	1	907200	+		20836	14449	10221	10260	23899	23899					-0.06697086816654974
LSSHDCWR	8	Unmodified	_LSSHDCWR_					0	0	0			REV__nc|ENSG00000142494|Q96FL8-3|SLC47A1	REV__nc|ENSG00000142494|Q96FL8-3|SLC47A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	502.224351	1002.43415	1.8574	0.00093282	-2.2704	-0.0011403	-0.41305	-0.00020745	502.2222580781978	55.74	0.22315	55.74	55.656	55.88	0	0	0	NaN	4.756	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907200	+		20837	14449	10221	10260							-0.06697086816654974
LSSLIDLDL	9	Unmodified	_LSSLIDLDL_					0	0	0			REV__ENSG00000125898|ENST00000381941|FAM110A	REV__ENSG00000125898|ENST00000381941|FAM110A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7823669314384	2	494.78169	987.548827	1.4038	0.00069456	-0.34904	-0.0001727	1.0547	0.00052186	494.78129745959814	65.951	0.44786	65.951	65.708	66.156	0					27	13	3	0	0	0	0.24063	1	27469	27469		28.487	0	1	1795900	+		20838	9684	10222	10261	23900	23900					0.0545550114627531
LSSLIDLDL	9	Unmodified	_LSSLIDLDL_					0	0	0			REV__ENSG00000125898|ENST00000381941|FAM110A	REV__ENSG00000125898|ENST00000381941|FAM110A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7827941775322	2	494.78169	987.548827	2.5766	0.0012749	-0.451	-0.00022315	2.1256	0.0010517	494.7811924004482	65.555	0.38004	65.882	65.674	66.054	0.32689					27	11	3	0	0	0	0.1735	1	27464	27464		36.044	0	1	2252700	+		20839	9684	10222	10261	23901	23901					0.0545550114627531
LSSMALTNV	9	Unmodified	_LSSMALTNV_					0	0	0			REV__tr|A0A553SU31|A0A553SU31_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06245PE=3SV=1	REV__tr|A0A553SU31|A0A553SU31_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_06245PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2464477419853	2	468.24696	934.479368	2.1968	0.0010287	-1.7731	-0.00083025	0.42373	0.00019841	468.2459267472208	46.642	0.29897	48.612	48.472	48.771	1.9703					15	9	2	0	0	0	0.70108	1	19507	19507		7.2892	0	1	748700	+		20840	15277	10223	10262	23902	23902					0.00950718925878391
LSSMTEEEK	9	Unmodified	_LSSMTEEEK_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF	nc|ENSG00000180764|A2A3N6|PIPSL	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.2459594607353	2	527.242072	1052.46959	1.8863	0.00099453	2.85	0.0015027	4.7363	0.0024972	527.2438290906429	78.661	0.31239	78.661	78.474	78.787	0					30	9	4	0	0	0	0.71526	1	32768	32768		6.7232	0	1	1769000			20841	6817	10224	10263	23903	23903					-0.05454513870154187
LSSPGPPVEAM	11	Unmodified	_LSSPGPPVEAM_					0	0	0			REV__nc|ENSG00000139977|Q147X3-2|NAA30	REV__nc|ENSG00000139977|Q147X3-2|NAA30	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	543.3065673708916	2	542.7708	1083.52705	2.7254	0.0014792	0.3225	0.00017504	3.0479	0.0016543	542.771356587559	73.57	0.52802	75.366	74.943	75.471	1.7962					24	16	2	0	0	0	0.13727	1	30855	30855		24.021	4.7636	1	1142100	+		20842	10114	10225	10264	23904	23904					-0.011376268739468287
LSSPLAPGL	9	Unmodified	_LSSPLAPGL_					0	0	0			REV__nc|ENSG00000102145|P15976-3|GATA1	REV__nc|ENSG00000102145|P15976-3|GATA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.7549011111259	2	427.752736	853.490919	1.0287	0.00044002	3.6107	0.0015445	4.6394	0.0019845	427.7542802933195	78.427	0.44073	78.427	78.189	78.629	0					33	13	4	0	0	0	0.76456	1	32649	32649		4.756	0	1	3173200	+		20843	9060	10226	10265	23905	23905					0.0583128401152635
LSSPLAPGL	9	Unmodified	_LSSPLAPGL_					0	0	0			REV__nc|ENSG00000102145|P15976-3|GATA1	REV__nc|ENSG00000102145|P15976-3|GATA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	427.752736	853.490919	1.0287	0.00044002	3.6107	0.0015445	4.6394	0.0019845	427.7542802933195	78.427	0.44073	78.427	78.189	78.629	0	0.0055955	0.00012555	NaN	4.756	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3173200	+		20844	9060	10226	10265							0.0583128401152635
LSSPLAPGL	9	Unmodified	_LSSPLAPGL_					0	0	0			REV__nc|ENSG00000102145|P15976-3|GATA1	REV__nc|ENSG00000102145|P15976-3|GATA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	427.752736	853.490919	2.1588	0.00092344	3.7849	0.001619	5.9437	0.0025424	427.75421544986176	78.159	0.47961	78.468	78.227	78.707	0.30933	0.047205	0.00027453	NaN	4.756	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3576200	+		20845	9060	10226	10265							0.0583128401152635
LSSPLAPGL	9	Unmodified	_LSSPLAPGL_					0	0	0			REV__nc|ENSG00000102145|P15976-3|GATA1	REV__nc|ENSG00000102145|P15976-3|GATA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	427.752736	853.490919	2.3802	0.0010181	2.9375	0.0012565	5.3176	0.0022746	427.75403752815674	76.601	0.48033	78.368	78.127	78.608	1.7672	-0.052801	-0.00045045	NaN	4.756	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1721400	+		20846	9060	10226	10265							0.0583128401152635
LSSPVVILLP	10	Unmodified	_LSSPVVILLP_					0	0	0			REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5599243044853	3	346.558354	1036.65323	1.4964	0.00051859	2.5797	0.00089401	4.0761	0.0014126	346.5594148925889	63.812	1.0536	64.141	63.348	64.401	0.32899					46	17	3	0	0	0	0.89803	1	26705	26705		0.77653	0	1	2615900	+		20847	9601	10227	10266	23906	23906					0.13637247693668542
LSSPVVILLP	10	Unmodified	_LSSPVVILLP_					0	0	0			REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5598022341728	3	346.558354	1036.65323	1.4919	0.00051704	2.2745	0.00078823	3.7664	0.0013053	346.55916651783355	66.673	0.86222	66.998	66.527	67.389	0.32449					47	19	3	0	0	0	0.89803	1	27895	27895		0.77653	0	1	3690800	+		20848	9601	10227	10266	23907	23907					0.13637247693668542
LSSPVVILLP	10	Unmodified	_LSSPVVILLP_					0	0	0			REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5596191287041	3	346.558354	1036.65323	1.6388	0.00056795	2.2161	0.00076801	3.8549	0.001336	346.5593235194652	62.425	0.98961	63.841	63.143	64.133	1.4154					58	31	3	0	0	0	0.89803	1	26151	26151		0.77653	0	1	3052900	+		20849	9601	10227	10266	23908	23908					0.13637247693668542
LSSPVVILLP	10	Unmodified	_LSSPVVILLP_					0	0	0			REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5593139529228	3	346.558354	1036.65323	1.7787	0.00061644	2.1107	0.00073149	3.8895	0.0013479	346.5590669488793	65.157	0.47177	66.556	66.316	66.788	1.3989					39	14	3	0	0	0	0.89803	1	27347	27347		0.77653	0	1	3603700	+		20850	9601	10227	10266	23909	23909					0.13637247693668542
LSSPVVILLP	10	Unmodified	_LSSPVVILLP_					0	0	0			REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	REV__ENST00000492193.1_1_2:136111018-136262059:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	346.5596191287041	3	346.558354	1036.65323	1.6965	0.00058795	2.8814	0.00099856	4.5779	0.0015865	346.5592871561179	62.96	0.91572	64.374	63.711	64.626	1.4134					32	17	2	0	0	0	0.12559	1	26151	26151		0.77653	0	1	1656900	+		20851	9601	10227	10266	23910	23910					0.13637247693668542
LSSRVHITRPV	11	Unmodified	_LSSRVHITRPV_					0	0	0		nc|ENSG00000258590|P0C6P0|NBEAP1	nc|ENSG00000258590|P0C6P0|NBEAP1	nc|ENSG00000258590|P0C6P0|NBEAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.9254638552666	3	422.254328	1263.74115	2.9484	0.001245	1.544	0.00065197	4.4925	0.001897	422.5876503076231	91.786	0.90343	91.976	91.4	92.303	0.19041					96	27	5	0	0	0	1.0365	1	38275	38275		1.2148	0.4383	1	1295800			20852	8012	10228	10267	23911	23911					0.11983261336968098
LSSTAKGR	8	Unmodified	_LSSTAKGR_					0	0	0			REV__ENST00000582764.2_1_17:16833621-16835808:-|nuORF	REV__ENST00000582764.2_1_17:16833621-16835808:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2393676638603	2	410.237784	818.461016	1.1916	0.00048885	3.6456	0.0014956	4.8373	0.0019844	410.2389695054814	38.756	0.28994	40.593	40.429	40.719	1.8366					12	8	2	0	0	0	0.87701	1	16241	16241		10.824	0	1	615890	+		20853	14005	10229	10268	23912	23912					0.0445234506619272
LSTCLFGRGI	10	Unmodified	_LSTCLFGRGI_					0	0	0		MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67;MKI67|p.R2903Efs*7|1|0.07|ENSG00000148773|chr10:128103134-128103135|-/T|frameshift_variant;MKI67|p.D2897Gfs*53|1|0.03|ENSG00000148773|chr10:128103129-128103150|TGTCTCCTGCTGCCAATTACAT/-|frameshift_variant;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.G1790Rfs*43|1|0.03|ENSG00000148773|chr10:128106473-128106474|-/TTTCCCTG|frameshift_variant;chr10:128123169-128125576|407|18.07|0.98|4.2|-|1|MKI67,MKI67|1	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1921874880791	2	533.789327	1065.5641	2.0099	0.0010729	-3.6183	-0.0019314	-1.6085	-0.00085857	533.7880266115523	63.449	0.31534	63.449	63.304	63.619	0					20	9	3	0	0	0	0.1245	1	26435	26435		10.824	6.0679	1	860440			20854	3220	10230	10269	23913	23913					0.03394089462517513
LSTGYPYVTL	10	Unmodified	_LSTGYPYVTL_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2928954958916	2	557.294965	1112.57538	2.4014	0.0013383	-3.5493	-0.001978	-1.1479	-0.00063971	557.293319720893	64.042	0.53855	65.449	64.958	65.497	1.4071					38	16	4	0	0	0	0.32206	1	26860	26860		37.974	5.6685	1	11017000	+		20855	14645	10231	10270	23914	23914					0.023591900376231933
LSTNLTILL	9	Unmodified	_LSTNLTILL_					0	0	0			REV__tr|A0A7D6ZFS1|A0A7D6ZFS1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16215PE=4SV=1	REV__tr|A0A7D6ZFS1|A0A7D6ZFS1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	987.6149169802666	1	987.608474	986.601197	3.8199	0.0037726	-1.836	-0.0018133	1.9839	0.0019593	987.6077803925428	83.027	0.30532	84.214	84.083	84.388	1.1879					15	9	2	0	0	0	0.007852	1	34858	34858		111.29	3.29	1	2525600	+		20856	15635	10232	10271	23915	23915					0.10736084279915303
LSTNLTILL	9	Unmodified	_LSTNLTILL_					0	0	0			REV__tr|A0A7D6ZFS1|A0A7D6ZFS1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16215PE=4SV=1	REV__tr|A0A7D6ZFS1|A0A7D6ZFS1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16215PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	987.608474	986.601197	3.8199	0.0037726	-1.836	-0.0018133	1.9839	0.0019593	987.6077803925428	83.027	0.30532	84.214	84.083	84.388	1.1879	-0.015198	-0.00069008	NaN	111.29	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2525600	+		20857	15635	10232	10271							0.10736084279915303
LSTRQPWNLL	10	Unmodified	_LSTRQPWNLL_					0	0	0		ENST00000455236.4_1_22:38121103-38121262:+|nuORF	ENST00000455236.4_1_22:38121103-38121262:+|nuORF	ENST00000455236.4_1_22:38121103-38121262:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	614.3483154177666	2	614.345855	1226.67716	1.8062	0.0011096	1.1794	0.00072457	2.9856	0.0018342	614.3464375815518	64.236	0.16002	64.565	64.466	64.626	0.32899					7	4	2	0	0	0	0.80702	1	26914	26914		11.495	0	1	277650			20858	6641	10233	10272	23916	23916					0.07288481180034978
LSTYCVNCV	9	Unmodified	_LSTYCVNCV_					0	0	0		ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4858276247978	3	334.485873	1000.43579	2.1223	0.00070987	-1.9195	-0.00064203	0.20282	6.7842E-05	334.48566804538075	59.332	0.33456	61.301	61.131	61.466	1.969					26	10	3	0	0	0	0.76103	1	24876	24876		4.897	0	1	2152400			20859	6685	10234	10273	23917	23917					-0.06441213842913385
LSTYCVNCV	9	Unmodified	_LSTYCVNCV_					0	0	0		ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	334.485873	1000.43579	-1.3102	-0.00043824	4.4288	0.0014814	3.1186	0.0010431	334.4872219059136	61.384	0.25241	61.384	61.203	61.456	0	0.093575	0.0041076	NaN	4.897	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	438480			20860	6685	10234	10273							-0.06441213842913385
LSTYCVNCV	9	Unmodified	_LSTYCVNCV_					0	0	0		ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	ENST00000463491.1_1_20:35457204-35467793:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	334.485873	1000.43579	1.2243	0.00040952	-0.41272	-0.00013805	0.81162	0.00027147	334.4869845182941	59.767	0.40035	61.187	60.99	61.39	1.4196	-0.10386	-0.00075059	NaN	4.897	37	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3454400			20861	6685	10234	10273							-0.06441213842913385
LSTYFKAL	8	Unmodified	_LSTYFKAL_					0	0	0		ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5;nc|ENSG00000012660|Q9NYP7-3|ELOVL5;ENST00000485336.5_1_6:53155264-53213696:-|nuORF	ENSG00000012660|ENST00000304434|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7702514529228	2	471.768386	941.522219	1.5338	0.0007236	1.8601	0.00087754	3.3939	0.0016011	471.7686164112994	55.252	0.37497	56.662	56.476	56.85	1.4099					20	12	2	0	0	0	0.74212	1	23149	23149		26.341	3.1929	1	1260100			20862	577	10235	10274	23918	23918					0.04911857045601664
LSTYLTLSV	9	Unmodified	_LSTYLTLSV_					0	0	0			REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7853576540947	2	498.784233	995.553913	1.5205	0.0007584	-1.0075	-0.00050255	0.51295	0.00025585	498.783646074464	66.774	0.31595	66.774	66.608	66.924	0					16	9	2	0	0	0	0.39927	1	27810	27810		20.454	4.6064	1	574660	+		20863	12406	10236	10275	23919	23919					0.05595805008908883
LSTYLTLSV	9	Unmodified	_LSTYLTLSV_					0	0	0			REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	498.784233	995.553913	2.996	0.0014944	-2.7042	-0.0013488	0.29183	0.00014556	498.78296466597857	65.218	0.47177	66.617	66.316	66.788	1.3989	-0.063714	-0.00061673	NaN	20.454	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1222100	+		20864	12406	10236	10275							0.05595805008908883
LSTYLTLSV	9	Unmodified	_LSTYLTLSV_					0	0	0			REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	REV__ENST00000321250.12_1_8:29965226-29965448:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	498.784233	995.553913	1.7671	0.00088138	-2.1555	-0.0010752	-0.38849	-0.00019377	498.7832342005207	64.704	0.47495	66.632	66.389	66.864	1.928	-0.04866	-6.9411E-05	NaN	20.454	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1366900	+		20865	12406	10236	10275							0.05595805008908883
LSVAEKKATS	10	Unmodified	_LSVAEKKATS_					0	0	0			REV__ENSG00000163293|ENST00000295461|NIPAL1	REV__ENSG00000163293|ENST00000295461|NIPAL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2979614138603	2	517.298039	1032.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.682	1	32.497	31.997	32.997	1.8151								0	0	0	0.66052	1	12860	12860		3.5965	0	1		+		20866	10678	10237	10276	23920	23920					0.06653708269118397
LSVFIPRFLF	10	Unmodified	_LSVFIPRFLF_					0	0	0			REV__ENST00000541600.5_1_2:222436882-222437059:-|nuORF	REV__ENST00000541600.5_1_2:222436882-222437059:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	619.9999877810478	2	619.868434	1237.72232	2.6977	0.0016722	1.3483	0.0008358	4.046	0.002508	619.8687969096426	74.886	0.6795	76.193	75.905	76.585	1.3063					36	21	2	0	0	0	0.12484	1	31325	31325		3.9444	3.3429	1	705750	+		20867	13042	10238	10277	23921	23921					0.11296331713219843
LSVFIPRFLF	10	Unmodified	_LSVFIPRFLF_					0	0	0			REV__ENST00000541600.5_1_2:222436882-222437059:-|nuORF	REV__ENST00000541600.5_1_2:222436882-222437059:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	619.868434	1237.72232	2.2512	0.0013954	1.4755	0.00091463	3.7267	0.0023101	619.8686905938712	75.725	0.95156	76.047	75.742	76.694	0.32164	-0.0093492	0.0001818	NaN	3.9444	56	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1023400	+		20868	13042	10238	10277							0.11296331713219843
LSVHFVLDGV	10	Unmodified	_LSVHFVLDGV_					0	0	0		ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8065673708916	2	543.303124	1084.5917	1.3625	0.00074025	2.8137	0.0015287	4.1762	0.0022689	543.805678532637	70.61	0.28069	70.933	70.738	71.019	0.32331					19	8	3	0	0	0	0.81324	1	29560	29560		10.824	2.9138	1	554510			20869	6033	10239	10278	23922	23922					0.05278315994382865
LSVHFVLDGV	10	Unmodified	_LSVHFVLDGV_					0	0	0		ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	543.303124	1084.5917	2.2577	0.0012266	2.9026	0.001577	5.1604	0.0028036	543.8051081656537	69.533	0.30635	70.898	70.758	71.064	1.3657	-0.0087955	0.00046292	NaN	10.824	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1558900			20870	6033	10239	10278							0.05278315994382865
LSVHFVLDGV	10	Unmodified	_LSVHFVLDGV_					0	0	0		ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	ENST00000361028.5_1_6:28348556-28348682:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	543.303124	1084.5917	1.2997	0.00070612	2.048	0.0011127	3.3476	0.0018188	543.3031129580002	69.037	0.39891	70.89	70.737	71.136	1.853	-0.016945	-0.00046576	NaN	10.824	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	934380			20871	6033	10239	10278							0.05278315994382865
LSVMEDHSHS	10	Unmodified	_LSVMEDHSHS_					0	0	0		nc|ENSG00000132170|P37231-3|PPARG;ENST00000477039.5_1_3:12393091-12447643:+|nuORF;PPARG|p.D288Qfs*56|1|0.1|ENSG00000132170|chr3:12416745-12416746|-/CAGAGTTTCAAAAACAGGAACCT|frameshift_variant;ENSG00000132170|ENST00000651735|PPARG;nc|ENSG00000132170|P37231-2|PPARG;nc|ENSG00000132170|P37231|PPARG	nc|ENSG00000132170|P37231-3|PPARG	nc|ENSG00000132170|P37231-3|PPARG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.2531005740166	2	571.250763	1140.48697	2.3407	0.0013371	3.0593	0.0017477	5.4	0.0030848	571.2522441787212	40.259	0.30409	41.569	41.361	41.665	1.3102					17	9	2	0	0	0	0.78468	1	16842	16842		13.906	3.0821	1	747530			20872	2516	10240	10279	23923	23923					-0.07765173544476056
LSVMLWII	8	Unmodified	_LSVMLWII_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7924072146416	2	487.790807	973.56706	2.8233	0.0013772	0.56458	0.0002754	3.3879	0.0016526	487.7912322754054	63.71	0.7166	65.638	65.296	66.012	1.928					31	22	2	0	0	0	0.88504	1	26594	26594		5.7604	0	1	1172300	+		20873	15902	10241	10280	23924	23924					0.07921964587308139
LSVNLKSN	8	Unmodified	_LSVNLKSN_					0	0	0			REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	REV__tr|A0A7D6ZUJ6|A0A7D6ZUJ6_9CLOTSMI1/KNR4familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7543212771416	2	437.753267	873.491981	1.4121	0.00061815	2.8613	0.0012525	4.2734	0.0018707	437.75374160612256	22.81	0.18553	24.024	23.948	24.134	1.2145					9	5	2	0	0	0	0.8735	1	9555	9555		13.042	0	1	279320	+		20874	15722	10242	10281	23925	23925					0.050174983804254225
LSVPIIIKY	9	Unmodified	_LSVPIIIKY_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3379394412041	2	523.336436	1044.65832	3.2404	0.0016958	-0.71778	-0.00037564	2.5226	0.0013202	523.3361296356038	64.437	0.42458	65.844	65.591	66.016	1.4071					39	13	4	0	0	0	0.010279	2	26994	26994;27040		107.19	52.413	1	25386000			20875	4130	10243	10282	23926;23927	23926					0.13777551556268008
LSVPIIIKY	9	Unmodified	_LSVPIIIKY_					0	0	0		ENSG00000170175|ENST00000306071|CHRNB1;nc|ENSG00000170175|P11230-2|CHRNB1;ENST00000573209.1_1_17:7350776-7358776:+|nuORF	ENSG00000170175|ENST00000306071|CHRNB1	ENSG00000170175|ENST00000306071|CHRNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3375732302666	2	523.336436	1044.65832	2.9258	0.0015312	-0.30216	-0.00015813	2.6237	0.0013731	523.3363600295489	63.852	0.49201	65.78	65.489	65.981	1.928					44	15	4	0	0	0	0.033504	2	26817	26767;26817		81.89	33.544	1	24054000			20876	4130	10243	10282	23928;23929	23929					0.13777551556268008
LSVPMPLPTV	10	Unmodified	_LSVPMPLPTV_					0	0	0		nc|ENSG00000104093|Q8TDJ6-2|DMXL2;DMXL2|p.P2585Lfs*7|1|0.03|ENSG00000104093|chr15:51464726-51464727|-/A|frameshift_variant;DMXL2|p.P2585Efs*17|1|0.03|ENSG00000104093|chr15:51464727-51464728|-/CTGAGATTGCACCACTGCTC|frameshift_variant;nc|ENSG00000104093|Q8TDJ6|DMXL2;nc|ENSG00000104093|Q8TDJ6-3|DMXL2;ENSG00000104093|ENST00000560891|DMXL2	nc|ENSG00000104093|Q8TDJ6-2|DMXL2	nc|ENSG00000104093|Q8TDJ6-2|DMXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3060790896416	2	527.304278	1052.594	2.8469	0.0015012	0.49315	0.00026004	3.34	0.0017612	527.304410117222	82.672	0.36613	84.342	84.113	84.48	1.67					24	11	3	0	0	0	0.88314	1	34711	34711		3.2813	0.39209	1	3082100			20877	413	10244	10283	23930	23930					0.06981028407813028
LSVSSCISDR	10	Unmodified	_LSVSSCISDR_					0	0	0			REV__nc|ENSG00000090615|Q08378-4|GOLGA3	REV__nc|ENSG00000090615|Q08378-4|GOLGA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1906005740166	2	533.763506	1065.51246	0.59742	0.00031888	-3.396	-0.0018127	-2.7986	-0.0014938	533.7627036074846	17.775	0.153	18.754	18.666	18.819	0.97922					7	5	2	0	0	0	0.12537	1	7384	7384		2.7352	2.2769	1	292850	+		20878	8893	10245	10284	23931	23931					-0.017676990220707012
LSVVLMFII	9	Unmodified	_LSVVLMFII_					0	0	0			REV__ENSG00000152661|ENST00000282561|GJA1	REV__ENSG00000152661|ENST00000282561|GJA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	518.2418090701103	2	517.819564	1033.62458	3.0059	0.0015565	1.7125	0.00088677	4.7184	0.0024433	517.8199011372296	75.172	0.58478	76.478	76.214	76.799	1.3063					31	18	2	0	0	0	0.11463	1	31658	31658		1.8442	0	1	1683000	+		20879	10429	10246	10285	23932	23932					0.10910806792890071
LSVVLMFII	9	Unmodified	_LSVVLMFII_					0	0	0			REV__ENSG00000152661|ENST00000282561|GJA1	REV__ENSG00000152661|ENST00000282561|GJA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.2411376833916	2	517.819564	1033.62458	2.942	0.0015234	0.90562	0.00046895	3.8476	0.0019924	517.8195805601694	74.842	0.77732	76.624	76.389	77.166	1.7817					36	24	2	0	0	0	0.10591	1	31420	31420		7.9102	0	1	1780900	+		20880	10429	10246	10285	23933	23933					0.10910806792890071
LSVVLMFII	9	Unmodified	_LSVVLMFII_					0	0	0			REV__ENSG00000152661|ENST00000282561|GJA1	REV__ENSG00000152661|ENST00000282561|GJA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	517.819564	1033.62458	2.0718	0.0010728	-0.44684	-0.00023138	1.6249	0.00084142	517.8191178185467	76.148	0.77161	76.148	75.948	76.719	0	-0.26825	-0.0010878	NaN	7.9102	40	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2048700	+		20881	10429	10246	10285							0.10910806792890071
LSWCLRPNMAV	11	Unmodified	_LSWCLRPNMAV_					0	0	0			REV__ENSG00000172377|ENST00000641439|OR9I1	REV__ENSG00000172377|ENST00000641439|OR9I1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.3288452029228	2	645.328293	1288.64203	1.6601	0.0010713	-2.0098	-0.001297	-0.34968	-0.00022566	645.3266543528314	41.818	0.28778	43.711	43.541	43.829	1.8927					21	8	3	0	0	0	0.91768	1	17549	17549		8.7454	0	1	2027400	+		20882	11064	10247	10286	23934	23934					0.009257790562287482
LSWKIRCDQD	10	Unmodified	_LSWKIRCDQD_					0	0	0			REV__ENST00000488171.5_1_1:207495110-207510876:+|nuORF	REV__ENST00000488171.5_1_1:207495110-207510876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.8780395388603	3	421.876529	1262.60776	1.6334	0.00068908	1.2985	0.00054781	2.9319	0.0012369	421.8770837890714	69.559	0.34432	69.881	69.689	70.034	0.32224					20	10	2	0	0	0	0.86677	1	29123	29123		5.0475	0.51865	1	3207000	+		20883	13407	10248	10287	23935	23935					-0.013043458310448841
LSWRRRRWKR	10	Unmodified	_LSWRRRRWKR_					0	0	0		ENST00000557821.5_1_15:40588574-40589003:-|nuORF;ENST00000260402.7_1_15:40588574-40589003:-|nuORF	ENST00000557821.5_1_15:40588574-40589003:-|nuORF	ENST00000557821.5_1_15:40588574-40589003:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	750.4545165896416	2	750.450177	1498.8858	3.0144	0.0022621	2.0019	0.0015024	5.0163	0.0037645	750.4515968999266	86.755	0.48389	87.846	87.606	88.09	1.0918					45	17	3	0	0	0	0.89803	1	36469	36469		0.40072	0.050084	1	8311500			20884	5614	10249	10288	23936	23936					0.15631367327478074
LSWRRRRWKR	10	Unmodified	_LSWRRRRWKR_					0	0	0		ENST00000557821.5_1_15:40588574-40589003:-|nuORF;ENST00000260402.7_1_15:40588574-40589003:-|nuORF	ENST00000557821.5_1_15:40588574-40589003:-|nuORF	ENST00000557821.5_1_15:40588574-40589003:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	750.4565307497978	2	750.450177	1498.8858	3.6269	0.0027218	1.6072	0.0012061	5.2341	0.0039279	750.451419743019	86.369	0.51321	87.916	87.69	88.203	1.547					61	18	4	0	0	0	0.89803	2	36362	36362;36431		1.6526	0.32309	1	15990000			20885	5614	10249	10288	23937;23938	23937					0.15631367327478074
LSWVFLVVI	9	Unmodified	_LSWVFLVVI_					0	0	0		nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72	nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72	nc|ENSG00000225698|A0A0B4J1Y9|IGHV3-72	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3300048708916	2	538.331153	1074.64775	1.7405	0.00093698	-3.1465	-0.0016939	-1.406	-0.00075688	538.3299190889454	75.515	0.56943	75.515	75.154	75.723	0					46	17	4	0	0	0	0.19075	1	31407	31407		34.102	0.65754	1	7612600			20886	8001	10250	10289	23939	23939					0.11341568901866594
LSWWLLLAGRR	11	Unmodified	_LSWWLLLAGRR_					0	0	0		ENST00000511799.5_3_5:60095008-60139355:-|nuORF	ENST00000511799.5_3_5:60095008-60139355:-|nuORF	ENST00000511799.5_3_5:60095008-60139355:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9087402224541	2	685.906414	1369.79827	2.5108	0.0017222	2.5653	0.0017596	5.0761	0.0034817	685.9076374213724	85.874	0.72399	86.126	85.975	86.699	0.25227					45	23	2	0	0	0	1.0366	1	36044	36044		1.1933	0	1	1339000			20887	7036	10251	10290	23940	23940					0.1281672861334755
LSYAAEFVI	9	Unmodified	_LSYAAEFVI_					0	0	0			REV__ITGA9|p.V741Gfs*12|1|0.08|ENSG00000144668|chr3:37736969-37736970|-/G|frameshift_variant	REV__ITGA9|p.V741Gfs*12|1|0.08|ENSG00000144668|chr3:37736969-37736970|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.538012683392	1	1012.53497	1011.5277	1.2247	0.00124	0.27688	0.00028035	1.5016	0.0015204	1012.5350969174272	83.628	0.37698	84.816	84.642	85.019	1.1879					28	11	3	0	0	0	0.069258	1	35149	35149		60.39	0	1	19017000	+		20888	10258	10252	10291	23941	23941					0.02239535837418316
LSYEAWII	8	Unmodified	_LSYEAWII_					0	0	0			REV__ENST00000476399.5_1_7:23776595-23810746:+|nuORF	REV__ENST00000476399.5_1_7:23776595-23810746:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7665893435478	2	497.765843	993.517133	3.2284	0.001607	0.18687	9.3018E-05	3.4153	0.0017	497.7656493322491	82.212	0.40948	83.882	83.734	84.144	1.67					25	12	3	0	0	0	0.87803	1	34535	34535		10.183	0	1	1326200	+		20889	11627	10253	10292	23942	23942					0.020115531830015243
LSYEELSSML	10	Unmodified	_LSYEELSSML_					0	0	0			REV__tr|A0A7D6VSR1|A0A7D6VSR1_9CLOTEutP/PduVfamilymicrocompartmentsystemproteinOS=ClostridiumintestinaleOX=36845GN=eutPPE=3SV=1	REV__tr|A0A7D6VSR1|A0A7D6VSR1_9CLOTEutP/PduVfamilymicrocompartmentsystemproteinOS=ClostridiumintestinaleOX=36845GN=eutPPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	586.2788574099541	2	586.281197	1170.54784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.828	1	59.797	59.297	60.297	1.969								0	0	0	0.45714	1	24257	24257		26.884	6.43	1		+		20890	15459	10254	10293	23943	23943					-0.030610812849090507
LSYEQEAW	8	Unmodified	_LSYEQEAW_					0	0	0			REV__nc|ENSG00000010030|Q9Y603-7|ETV7	REV__nc|ENSG00000010030|Q9Y603-7|ETV7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2322875857353	2	513.232364	1024.45018	2.3666	0.0012146	-2.2782	-0.0011692	0.088406	4.5373E-05	513.2312658959847	82.352	0.33916	82.352	82.216	82.555	0					25	10	3	0	0	0	0.88504	1	34313	34313		5.7604	0	1	1979000	+		20891	8526	10255	10294	23944	23944					-0.06107102098746964
LSYLAENYLF	10	Unmodified	_LSYLAENYLF_					0	0	0			REV__nc|ENSG00000174483|Q8NFJ9-3|BBS1	REV__nc|ENSG00000174483|Q8NFJ9-3|BBS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8159057497978	2	616.813522	1231.61249	1.452	0.0008956	2.5895	0.0015972	4.0414	0.0024928	616.8149411928274	84.3	0.37166	85.459	85.251	85.622	1.159					25	11	3	0	0	0	0.57775	1	35389	35389		24.021	0	1	3416500	+		20892	11123	10256	10295	23945	23945					0.005948615833858639
LSYLAENYLF	10	Unmodified	_LSYLAENYLF_					0	0	0			REV__nc|ENSG00000174483|Q8NFJ9-3|BBS1	REV__nc|ENSG00000174483|Q8NFJ9-3|BBS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8167602419853	2	616.813522	1231.61249	1.6065	0.00099091	2.3131	0.0014268	3.9196	0.0024177	616.8154895450856	83.795	0.4008	85.433	85.253	85.653	1.6379					24	12	3	0	0	0	0.57775	1	35112	35112		24.021	0	1	3752900	+		20893	11123	10256	10295	23946	23946					0.005948615833858639
LSYLFVLAGF	10	Unmodified	_LSYLFVLAGF_					0	0	0		tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.3597289919853	2	565.318243	1128.62193	3.4968	0.0019768	0.16817	9.5072E-05	3.6649	0.0020719	565.8186682423126	82.538	0.28638	83.751	83.634	83.92	1.2125					17	8	3	0	0	0	0.12438	1	34682	34682		11.64	3.7301	1	1243100			20894	16060	10257	10296	23947	23947					0.06276674659557102
LSYNLPLEL	9	Unmodified	_LSYNLPLEL_					0	0	0		nc|ENSG00000110721|P35790-2|CHKA;ENSG00000110721|ENST00000265689|CHKA	nc|ENSG00000110721|P35790-2|CHKA	nc|ENSG00000110721|P35790-2|CHKA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.7595703005791	2	531.297507	1060.58046	2.9183	0.0015505	-4.17	-0.0022155	-1.2517	-0.000665	531.2937876170304	62.324	0.19179	63.742	63.588	63.779	1.4177					11	5	3	0	0	0	0.10346	1	26104	26104		11.495	3.5846	1	1058700			20895	1715	10258	10297	23948	23948					0.05259493900234702
LSYRKWTL	8	Unmodified	_LSYRKWTL_					0	0	0		ENST00000367162.7_1_1:205138941-205156559:-|nuORF	ENST00000367162.7_1_1:205138941-205156559:-|nuORF	ENST00000367162.7_1_1:205138941-205156559:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1920043826103	2	533.805834	1065.59712	2.2637	0.0012084	0.65652	0.00035046	2.9202	0.0015588	534.3079910211932	54.438	0.14904	56.407	56.318	56.467	1.9684					6	4	2	0	0	0	2.3239	1	22808	22808		2.3027	0	1	747860			20896	6060	10259	10298	23949	23949					0.06694039576859723
LSYRSLRRRVR	11	Unmodified	_LSYRSLRRRVR_					0	0	0		nc|ENSG00000196218|P21817-3|RYR1;nc|ENSG00000196218|P21817-2|RYR1;ENSG00000196218|ENST00000359596|RYR1	nc|ENSG00000196218|P21817-3|RYR1	nc|ENSG00000196218|P21817-3|RYR1	MSMS	GG20161007_CRH_Patient100_W632_01	3	731.4452392458916	2	731.4473	1460.88005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.49	1	118.72	118.22	119.22	0.23128								0	0	0	0.63775	1	51217	51217		1.3295	0.9789	1				20897	4922	10260	10299	23950	23950					0.1680422402514523
LSYYYHHA	8	Unmodified	_LSYYYHHA_					0	0	0			REV__ENSG00000166821|ENST00000300056|PEX11A	REV__ENSG00000166821|ENST00000300056|PEX11A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.2445556521416	2	527.243067	1052.47158	1.8863	0.00099453	0.96349	0.000508	2.8498	0.0015025	527.2438290906429	78.661	0.31239	78.661	78.474	78.787	0					30	9	4	0	0	0	0.88587	1	32721	32721		5.2307	0.47466	1	1769000	+		20898	10840	10261	10300	23951	23951					-0.052556722793724475
LTAAASSC	8	Unmodified	_LTAAASSC_					0	0	0			REV__nc|ENSG00000174325|Q969H9|DIRC1	REV__nc|ENSG00000174325|Q969H9|DIRC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	362.8817016482353	2	362.170721	722.32689	-0.22642	-8.2003E-05	3.9441	0.0014284	3.7177	0.0013464	362.1729385844732	29.047	0.45166	30.329	30.191	30.643	1.2825					27	14	3	0	0	0	2.3239	1	12134	12134		5.2307	2.3415	1	2159400	+		20899	14492	10262	10301	23952	23952					-0.045380567508800596
LTAAASSC	8	Unmodified	_LTAAASSC_					0	0	0			REV__nc|ENSG00000174325|Q969H9|DIRC1	REV__nc|ENSG00000174325|Q969H9|DIRC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	362.170721	722.32689	0.38237	0.00013848	4.6531	0.0016852	5.0355	0.0018237	362.1723119398377	28.605	0.21161	30.38	30.274	30.486	1.7754	0.025492	8.1445E-05	NaN	8.5933	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1671200	+		20900	14492	10262	10301							-0.045380567508800596
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7961913943291	2	495.795132	989.575711	1.2663	0.00062781	1.2488	0.00061917	2.5151	0.001247	495.79580889235757	69.336	0.43772	69.336	69.109	69.547	0					31	13	3	0	0	0	0.37357	1	28868	28868		21.747	4.8044	1	3847000	+		20901	11652	10263	10302	23953	23953					0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7961608767509	2	495.795132	989.575711	2.1107	0.0010465	1.0684	0.00052969	3.1791	0.0015762	495.7955026591229	68.87	0.4398	69.193	68.998	69.438	0.32224					32	13	3	0	0	0	0.24063	1	28838	28838		28.487	6.7402	1	3381800	+		20902	11652	10263	10302	23954	23954					0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7975646853447	2	495.795132	989.575711	1.9443	0.00096397	0.52218	0.0002589	2.4665	0.0012229	495.79546978870263	67.801	0.51215	69.179	68.882	69.394	1.3778					49	16	4	0	0	0	0.49082	1	28376	28376		15.847	1.2655	1	12937000	+		20903	11652	10263	10302	23955	23955					0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7957641482353	2	495.795132	989.575711	1.1868	0.00058842	0.52431	0.00025995	1.7111	0.00084837	495.7954943982427	67.236	0.48895	69.125	68.892	69.381	1.8889					42	15	4	0	0	0	0.37357	3	28227	28179;28227;28281		21.747	8.2388	1	10998000	+		20904	11652	10263	10302	23956;23957;23958	23957					0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	495.795132	989.575711	1.2663	0.00062781	1.2488	0.00061917	2.5151	0.001247	495.79580889235757	69.336	0.43772	69.336	69.109	69.547	0	0.1275	0.0004783	NaN	28.487	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3847000	+		20905	11652	10263	10302							0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.795132	989.575711	1.9443	0.00096397	0.52218	0.0002589	2.4665	0.0012229	495.79546978870263	67.801	0.51215	69.179	68.882	69.394	1.3778	-0.028953	-0.00024225	NaN	28.487	49	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12937000	+		20906	11652	10263	10302							0.08050609757469829
LTAETTKKV	9	Unmodified	_LTAETTKKV_					0	0	0			REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	REV__ENST00000537556.1_1_12:64238596-64474299:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	495.795132	989.575711	1.1868	0.00058842	0.52431	0.00025995	1.7111	0.00084837	495.7954943982427	67.236	0.48895	69.125	68.892	69.381	1.8889	-0.082972	-0.00024013	NaN	28.487	42	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10998000	+		20907	11652	10263	10302							0.08050609757469829
LTAEVPPELL	10	Unmodified	_LTAEVPPELL_					0	0	0		nc|ENSG00000101197|Q96CA5-2|BIRC7;ENSG00000101197|ENST00000217169|BIRC7	nc|ENSG00000101197|Q96CA5-2|BIRC7	nc|ENSG00000101197|Q96CA5-2|BIRC7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3123046755791	2	541.310615	1080.60668	2.1799	0.00118	0.90217	0.00048836	3.0821	0.0016684	541.3110747735668	82.07	0.30794	82.35	82.244	82.551	0.2802					15	9	2	0	0	0	0.77604	1	34298	34298		14.838	1.3304	1	2419500			20908	1329	10264	10303	23959	23959					0.06959763071699854
LTAEVPPELL	10	Unmodified	_LTAEVPPELL_					0	0	0		nc|ENSG00000101197|Q96CA5-2|BIRC7;ENSG00000101197|ENST00000217169|BIRC7	nc|ENSG00000101197|Q96CA5-2|BIRC7	nc|ENSG00000101197|Q96CA5-2|BIRC7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3127319216728	2	541.310615	1080.60668	3.1513	0.0017059	1.0323	0.00055878	4.1836	0.0022646	541.310960267329	81.131	0.3714	82.364	82.161	82.533	1.2332					27	11	3	0	0	0	0.62746	1	34095	34095		21.747	6.9084	1	6265900			20909	1329	10264	10303	23960	23960					0.06959763071699854
LTAMIITFR	9	Unmodified	_LTAMIITFR_					0	0	0			REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|22|2|sense	REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|22|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1921874880791	2	533.309895	1064.60524	1.8629	0.00099348	-3.7809	-0.0020164	-1.9181	-0.0010229	533.3073898183553	50.093	0.43009	52.07	51.819	52.25	1.9772					20	13	2	0	0	0	0.11518	1	20983	20983		3.9444	1.3669	1	720520	+		20910	14252	10265	10304	23961	23961					0.07551850501954505
LTAPSLFLWC	10	Unmodified	_LTAPSLFLWC_					0	0	0			REV__ENSG00000011083|ENST00000230671|SLC6A7	REV__ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8038207888603	2	575.801903	1149.58925	1.763	0.0010152	1.2953	0.00074586	3.0584	0.001761	575.8024933541884	55.342	0.29988	55.342	55.162	55.462	0					21	13	2	0	0	0	0.82019	1	23031	23031		10.074	0.6908	1	2980900	+		20911	8532	10266	10305	23962	23962					0.020441442650735553
LTASFIGATI	10	Unmodified	_LTASFIGATI_					0	0	0			REV__nc|ENSG00000074803|Q13621-3|SLC12A1	REV__nc|ENSG00000074803|Q13621-3|SLC12A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7862121462822	2	497.2844	992.554247	0.81211	0.00040385	0.41148	0.00020462	1.2236	0.00060847	497.2847194799835	52.8	0.22535	54.201	54.121	54.346	1.4005					10	6	2	0	0	0	0.28905	1	22097	22097		39.95	3.8227	1	1285500	+		20912	8755	10267	10306	23963	23963					0.05767224728754172
LTAVPVTVL	9	Unmodified	_LTAVPVTVL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	913.5789062380791	1	912.576445	911.569169	1.5118	0.0013797	0.12239	0.00011169	1.6342	0.0014913	912.5761320799143	70.931	0.28574	71.254	71.019	71.305	0.32359					20	8	3	0	0	0	0.13873	1	29689	29689		39.957	5.8549	1	1790900	+		20913	11666	10268	10307	23964	23964					0.10984716596738053
LTAVPVTVL	9	Unmodified	_LTAVPVTVL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7933837771416	2	456.791861	911.569169	2.6437	0.0012076	2.5206	0.0011514	5.1643	0.002359	456.79253272638243	69.662	0.40845	71.028	70.847	71.255	1.3657					28	12	4	0	0	0	0.042029	1	29227	29227		74.423	7.0789	1	3682900	+		20914	11666	10268	10307	23965	23965					0.10984716596738053
LTAVPVTVL	9	Unmodified	_LTAVPVTVL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7931396365166	2	456.791861	911.569169	1.7382	0.00079398	2.8886	0.0013195	4.6267	0.0021134	456.79261192139876	69.141	0.43439	70.994	70.828	71.262	1.853					29	13	3	0	0	0	0.042029	1	29048	29048		74.423	7.0789	1	2873900	+		20915	11666	10268	10307	23966	23966					0.10984716596738053
LTAVPVTVL	9	Unmodified	_LTAVPVTVL_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	456.791861	911.569169	2.6437	0.0012076	2.5206	0.0011514	5.1643	0.002359	456.79253272638243	69.662	0.40845	71.028	70.847	71.255	1.3657	-0.053841	-0.0002504	NaN	74.423	28	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3682900	+		20916	11666	10268	10307							0.10984716596738053
LTAVRCYW	8	Unmodified	_LTAVRCYW_					0	0	0		ENSG00000258659|ENST00000429814|TRIM34;ENST00000495668.1_1_11:5656076-5664473:+|nuORF	ENSG00000258659|ENST00000429814|TRIM34	ENSG00000258659|ENST00000429814|TRIM34	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2563659548759	2	506.257662	1010.50077	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.402	1	69.402	68.902	69.902	0								0	0	0	1.0178	1	28903	28903		5.2307	0	1				20917	5411	10269	10308	23967	23967					-0.004058512547544524
LTAYLSRV	8	Unmodified	_LTAYLSRV_					0	0	0		LGR6-RNPEP|1|fusion	LGR6-RNPEP|1|fusion	LGR6-RNPEP|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	922.5476562380791	1	922.535643	921.528367	3.8963	0.0035945	2.0411	0.001883	5.9374	0.0054774	922.5375352337832	96.259	0.46068	96.68	96.541	97.002	0.4212					35	14	5	0	0	0	0.79422	1	40601	40601		21.747	4.6601	1	521930000			20918	7783	10270	10309	23968	23968					0.06446375277153038
LTCLPLKLL	9	Unmodified	_LTCLPLKLL_					0	0	0		ENST00000396410.8_1_16:15130957-15131065:+|nuORF	ENST00000396410.8_1_16:15130957-15131065:+|nuORF	ENST00000396410.8_1_16:15130957-15131065:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3267700076103	2	507.325014	1012.63547	2.6949	0.0013672	-1.6414	-0.0008327	1.0536	0.00053451	507.32499032459634	73.331	0.34502	75.136	74.888	75.233	1.805					13	10	2	0	0	0	0.5697	1	30765	30765		12.532	2.3482	1	594270			20919	6301	10271	10310	23969	23969					0.1296620916715483
LTCLPLKLL	9	Unmodified	_LTCLPLKLL_					0	0	0		ENST00000396410.8_1_16:15130957-15131065:+|nuORF	ENST00000396410.8_1_16:15130957-15131065:+|nuORF	ENST00000396410.8_1_16:15130957-15131065:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	507.325014	1012.63547	3.826	0.001941	-0.735	-0.00037288	3.091	0.0015681	507.32504762849527	73.861	0.34409	75.179	74.935	75.279	1.318	0.021241	0.00036551	NaN	12.532	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1080800			20920	6301	10271	10310							0.1296620916715483
LTDAGAGSSHL	11	Unmodified	_LTDAGAGSSHL_					0	0	0			REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	REV__nc|ENSG00000101115|Q9UJQ4-2|SALL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.7565185427666	2	514.753995	1027.49344	1.8757	0.00096555	0.83699	0.00043084	2.7127	0.0013964	514.7548121020557	79.127	0.24828	79.428	79.279	79.527	0.30047					12	7	2	0	0	0	0.37492	1	33094	33094		27.629	2.9549	1	707500	+		20921	9023	10272	10311	23970	23970					-0.01920912321452306
LTDEDFSPF	9	Unmodified	_LTDEDFSPF_					0	0	0		nc|ENSG00000172661|Q9Y4E1-5|WASHC2C;nc|ENSG00000172661|Q9Y4E1-3|WASHC2C;nc|ENSG00000172661|Q9Y4E1-6|WASHC2C;nc|ENSG00000172661|Q9Y4E1-2|WASHC2C;nc|ENSG00000172661|Q9Y4E1-1|WASHC2C;nc|ENSG00000172661|Q9Y4E1-4|WASHC2C;nc|ENSG00000099290|Q641Q2-2|WASHC2A;ENSG00000172661|ENST00000623400|WASHC2C;ENSG00000099290|ENST00000282633|WASHC2A;ENST00000417804.1_1_10:51819001-51821324:-|nuORF	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	nc|ENSG00000172661|Q9Y4E1-5|WASHC2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1070.471728503704	1	1070.46768	1069.46041	3.0866	0.0033041	-0.21484	-0.00022998	2.8718	0.0030742	1070.4675428966339	72.854	0.31705	74.664	74.48	74.797	1.8101					17	9	2	0	0	0	0.19075	1	30541	30541		34.102	1.797	1	2134100			20922	1203	10273	10312	23971	23971					-0.07154539164184825
LTDEQVLFL	9	Unmodified	_LTDEQVLFL_					0	0	0		tr|A0A7D6ZH31|A0A7D6ZH31_9CLOTGlutathione-dependentformaldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01270PE=3SV=1	tr|A0A7D6ZH31|A0A7D6ZH31_9CLOTGlutathione-dependentformaldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01270PE=3SV=1	tr|A0A7D6ZH31|A0A7D6ZH31_9CLOTGlutathione-dependentformaldehydedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01270PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2959472537041	2	539.294965	1076.57538	1.5436	0.00083246	-0.43637	-0.00023533	1.1072	0.00059713	539.2947712643928	66.713	0.39233	68.602	68.467	68.86	1.8889					23	12	2	0	0	0	0.044893	1	28028	28028		71.922	3.8416	1	8012800			20923	17080	10274	10313	23972	23972					0.040151900376031335
LTDHNPKTYW	10	Unmodified	_LTDHNPKTYW_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	637.8124877810478	2	637.811845	1273.60914	1.6412	0.0010468	0.6122	0.00039047	2.2534	0.0014372	637.8118544638023	79.281	1.2136	79.582	78.823	80.037	0.30046					76	38	3	0	0	0	0.88022	1	33117	33117		3.5965	0	1	821540			20924	669	10275	10314	23973	23973					-0.016723884706152603
LTDHNPKTYW	10	Unmodified	_LTDHNPKTYW_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	637.811845	1273.60914	2.2693	0.0014474	3.8103	0.0024302	6.0795	0.0038776	637.8127930905503	78.457	0.45998	79.724	79.449	79.909	1.2668	0.12884	0.0039052	NaN	3.5965	16	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556170			20925	669	10275	10314							-0.016723884706152603
LTDHNPKTYW	10	Unmodified	_LTDHNPKTYW_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7;ENSG00000112659|ENST00000252050|CUL9;ENST00000515773.5_1_6:43164260-43192180:+|nuORF;nc|ENSG00000112659|Q8IWT3-3|CUL9	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	637.811845	1273.60914	1.4459	0.00092221	3.8569	0.00246	5.3028	0.0033822	637.8133579243427	78.059	0.62257	79.81	79.559	80.181	1.7514	0.21526	0.0039646	NaN	3.5965	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	604970			20926	669	10275	10314							-0.016723884706152603
LTDIFLVIG	9	Unmodified	_LTDIFLVIG_					0	0	0		tr|A0A7D6VPQ1|A0A7D6VPQ1_9CLOTAI-2EfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23830PE=3SV=1	tr|A0A7D6VPQ1|A0A7D6VPQ1_9CLOTAI-2EfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23830PE=3SV=1	tr|A0A7D6VPQ1|A0A7D6VPQ1_9CLOTAI-2EfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23830PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7978698611259	2	495.797143	989.579734	1.2412	0.00061536	-1.032	-0.00051166	0.20916	0.0001037	495.7969352484106	69.815	0.34923	69.815	69.675	70.024	0					22	10	3	0	0	0	0.59203	1	29105	29105		11.64	0	1	1341400			20927	16772	10276	10315	23974	23974					0.08452699251188278
LTDISIEL	8	Unmodified	_LTDISIEL_					0	0	0			REV__MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	REV__MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	903.5047485232353	1	903.50334	902.496064	1.97	0.0017799	0.42994	0.00038845	2.3999	0.0021684	903.5034664187319	67.912	0.52139	69.782	69.489	70.01	1.87					44	16	3	0	0	0	0.11802	1	28481	28481		123.1	5.4975	1	22389000	+		20928	11640	10277	10316	23975	23975					0.040915430834729705
LTDLIGLGFV	10	Unmodified	_LTDLIGLGFV_					0	0	0			REV__tr|A0A7D6ZTM9|A0A7D6ZTM9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11835PE=4SV=1	REV__tr|A0A7D6ZTM9|A0A7D6ZTM9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8064453005791	2	524.307875	1046.6012	0.74674	0.00039152	-1.2818	-0.00067206	-0.53507	-0.00028054	524.3079745741111	58.222	0.74462	59.64	59.29	60.035	1.4181					82	29	4	0	0	0	0.41677	1	24356	24356		32.305	1.6689	1	46978000	+		20929	15716	10278	10317	23976	23976					0.07976084279880524
LTDVLLLLQ	9	Unmodified	_LTDVLLLLQ_					0	0	0		nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;ENSG00000104880|ENST00000668164|ARHGEF18;ARHGEF18|p.E529Kfs*25|1|0.05|ENSG00000104880|chr19:7456369-7456369|A/-|frameshift_variant;ARHGEF18|p.E555Dfs*22|1|0.14|ENSG00000104880|chr19:7458559-7458560|AG/-|frameshift_variant	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3264648318291	2	514.323525	1026.6325	4.4423	0.0022848	0.40858	0.00021014	4.8509	0.0024949	514.3236821932279	94.399	0.3413	95.14	94.95	95.291	0.74124					18	10	2	0	0	0	0.076627	1	39707	39707		57.471	2.6978	1	661420			20930	1486	10279	10318	23977	23977					0.12024657314009346
LTDVLLLLQ	9	Unmodified	_LTDVLLLLQ_					0	0	0		nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;ENSG00000104880|ENST00000668164|ARHGEF18;ARHGEF18|p.E529Kfs*25|1|0.05|ENSG00000104880|chr19:7456369-7456369|A/-|frameshift_variant;ARHGEF18|p.E555Dfs*22|1|0.14|ENSG00000104880|chr19:7458559-7458560|AG/-|frameshift_variant	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.323525	1026.6325	3.5706	0.0018365	-0.43344	-0.00022293	3.1372	0.0016135	514.3232711295217	93.919	0.25178	95.108	95.017	95.269	1.1887	-0.016257	-0.00046181	NaN	57.471	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426140			20931	1486	10279	10318							0.12024657314009346
LTEDIVQFL	9	Unmodified	_LTEDIVQFL_					0	0	0			REV__ENST00000525604.1_1_11:130011383-130011476:+|nuORF	REV__ENST00000525604.1_1_11:130011383-130011476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2947265505791	2	539.294965	1076.57538	1.5436	0.00083246	-0.43637	-0.00023533	1.1072	0.00059713	539.2947712643928	66.713	0.39233	68.602	68.467	68.86	1.8889					23	12	2	0	0	0	0.066815	1	27979	27979		61.357	0	1	8012800	+		20932	13662	10280	10319	23978	23978					0.04015190037625871
LTEDSHWKLMK	11	Unmodified	_LTEDSHWKLMK_					0	0	0		ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	ENSG00000204740|ENST00000454679|MALRD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3541747927666	2	694.355562	1386.69657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.553	1	44.474	43.974	44.974	1.9211								0	0	0	0.63773	1	17832	17832		8.7454	1.1365	1				20933	5160	10281	10320	23979	23979					0.01869069408598989
LTEHQKIHSGD	11	Unmodified	_LTEHQKIHSGD_					0	0	0		ENSG00000183309|ENST00000526926|ZNF623;nc|ENSG00000183309|O75123|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	ENSG00000183309|ENST00000526926|ZNF623	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	632.8173705935478	2	632.817658	1263.62076	0.19231	0.0001217	-1.1592	-0.00073357	-0.9669	-0.00061187	632.8175181956285	14.525	0.12371	14.638	14.542	14.666	0.11295					8	3	3	0	0	0	0.91768	1	6027	6027		8.7454	0.58988	1	628520			20934	4647	10282	10321	23980	23980					-0.0005019144730340486
LTEKERIVPKP	11	Unmodified	_LTEKERIVPKP_					0	0	0		ENST00000498256.1_1_8:29489773-29490157:+|nuORF	ENST00000498256.1_1_8:29489773-29490157:+|nuORF	ENST00000498256.1_1_8:29489773-29490157:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2694274783134	3	437.266122	1308.77654	2.526	0.0011045	2.3597	0.0010318	4.8857	0.0021364	437.26696550150893	39.882	0.49797	41.192	40.802	41.3	1.3102					21	16	2	0	0	0	1.0365	1	16659	16659		1.2148	0.14337	1	2027800			20935	6968	10283	10322	23981	23981					0.13449879074119053
LTEKEVAMIF	10	Unmodified	_LTEKEVAMIF_					0	0	0		ITSN1|p.S1555Tfs*2|1|0.04|ENSG00000205726|chr21:33883659-33883659|G/-|frameshift_variant;nc|ENSG00000205726|Q15811-4|ITSN1;nc|ENSG00000205726|Q15811-9|ITSN1;nc|ENSG00000205726|Q15811-8|ITSN1;ENSG00000205726|ENST00000381318|ITSN1	ITSN1|p.S1555Tfs*2|1|0.04|ENSG00000205726|chr21:33883659-33883659|G/-|frameshift_variant	ITSN1|p.S1555Tfs*2|1|0.04|ENSG00000205726|chr21:33883659-33883659|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8231689333916	2	590.81775	1179.62095	2.9581	0.0017477	2.9701	0.0017548	5.9282	0.0035025	590.8208734334465	74.376	0.68945	76.173	75.838	76.527	1.7962					40	21	3	0	0	0	0.38674	1	31231	31231		34.102	2.8341	1	3824400			20936	5187	10284	10323	23982	23982					0.038320922283446635
LTEKFVLLL	9	Unmodified	_LTEKFVLLL_					0	0	0		nc|ENSG00000111885|P33908-2|MAN1A1;ENSG00000111885|ENST00000368468|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	537.7774536013603	2	538.341718	1074.66888	2.7995	0.0015071	-0.31681	-0.00017055	2.4827	0.0013365	538.3417694139357	62.656	0.31388	64.6	64.438	64.752	1.9444					16	9	2	0	0	0	0.094078	1	26265	26265		12.532	4.6214	1	1395800			20937	1760	10285	10324	23983	23983					0.13453534210702855
LTEKFVLLL	9	Unmodified	_LTEKFVLLL_					0	0	0		nc|ENSG00000111885|P33908-2|MAN1A1;ENSG00000111885|ENST00000368468|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	538.341718	1074.66888	1.7311	0.0009319	0.94663	0.00050961	2.6777	0.0014415	538.3424474296878	65.057	0.2825	65.057	64.914	65.197	0	0.25702	0.00011991	NaN	12.532	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1254000			20938	1760	10285	10324							0.13453534210702855
LTEKFVLLL	9	Unmodified	_LTEKFVLLL_					0	0	0		nc|ENSG00000111885|P33908-2|MAN1A1;ENSG00000111885|ENST00000368468|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	538.341718	1074.66888	1.9581	0.0010542	1.2825	0.00069045	3.2407	0.0017446	538.3423681614469	64.519	0.25827	64.848	64.691	64.949	0.32899	0.048078	0.00048159	NaN	12.532	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	979750			20939	1760	10285	10324							0.13453534210702855
LTEKLQAETEE	11	Unmodified	_LTEKLQAETEE_					0	0	0		FOSL2|p.G213Vfs*7|1|0.2|ENSG00000075426|chr2:28412101-28412101|G/-|frameshift_variant;nc|ENSG00000075426|P15408-3|FOSL2;ENSG00000075426|ENST00000264716|FOSL2	FOSL2|p.G213Vfs*7|1|0.2|ENSG00000075426|chr2:28412101-28412101|G/-|frameshift_variant	FOSL2|p.G213Vfs*7|1|0.2|ENSG00000075426|chr2:28412101-28412101|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.885635	1289.63508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.479	1	96.584	96.084	97.084	0.105								0	0	0	0.63775	1	40371	40371		0.40827	0	1				20940	933	10286	10325	23984	23984					0.0018441619033637835
LTERWYRLRR	10	Unmodified	_LTERWYRLRR_					0	0	0			REV__ZNF813|p.H293Rfs*10|1|0.05|ENSG00000198346|chr19:53491109-53491110|-/G|frameshift_variant	REV__ZNF813|p.H293Rfs*10|1|0.05|ENSG00000198346|chr19:53491109-53491110|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2530090212822	4	362.961289	1447.81605	0.18665	6.7746E-05	-0.94514	-0.00034305	-0.75849	-0.0002753	362.9606398092565	23.543	0.27281	25.194	25.054	25.327	1.6511					15	8	3	0	0	0	0.1256	1	9860	9860		0.62683	0.17231	1	625830	+		20941	15944	10287	10326	23985	23985					0.11005443868180009
LTESLKTKA	9	Unmodified	_LTESLKTKA_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7983886599541	2	495.795132	989.575711	1.2412	0.00061536	3.0249	0.0014997	4.266	0.0021151	495.7969352484106	69.815	0.34923	69.815	69.675	70.024	0					22	10	3	0	0	0	0.68551	1	29057	29057		7.9102	2.6795	1	1341400			20942	2197	10288	10327	23986	23986					0.08050609757481197
LTESLKTKA	9	Unmodified	_LTESLKTKA_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7972900271416	2	495.795132	989.575711	2.0181	0.0010005	1.439	0.00071346	3.4571	0.001714	495.79590792211917	69.383	0.40926	69.705	69.469	69.878	0.32224					20	12	2	0	0	0	0.68551	1	29013	29013		7.9102	0	1	1380600			20943	2197	10288	10327	23987	23987					0.08050609757481197
LTEVLKVIS	9	Unmodified	_LTEVLKVIS_					0	0	0			REV__ENSG00000197442|ENST00000359015|MAP3K5	REV__ENSG00000197442|ENST00000359015|MAP3K5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2260009646416	2	501.3157	1000.61685	2.2964	0.0011512	4.203	0.002107	6.4993	0.0032582	501.3178900204573	44.07	0.18636	45.424	45.315	45.502	1.3536					8	5	2	0	0	0	0.040553	1	18472	18472		43.858	3.901	1	1561300	+		20944	11674	10289	10328	23988	23988					0.11656370796947613
LTFDKIVAT	9	Unmodified	_LTFDKIVAT_					0	0	0			REV__tr|A0A7D6ZI67|A0A7D6ZI67_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03055PE=3SV=1	REV__tr|A0A7D6ZI67|A0A7D6ZI67_9CLOTLysRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03055PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2930480837822	2	504.292225	1006.5699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.523	1	69.523	69.023	70.023	0								0	0	0	0.42693	1	28953	28953		4.3292	0	1		+		20945	15660	10290	10329	23989	23989					0.06687511245786482
LTFGIWTAL	9	Unmodified	_LTFGIWTAL_					0	0	0		nc|ENSG00000106648|Q7Z4T8-2|GALNTL5;ENSG00000106648|ENST00000392800|GALNTL5	nc|ENSG00000106648|Q7Z4T8-2|GALNTL5	nc|ENSG00000106648|Q7Z4T8-2|GALNTL5	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1953918337822	3	341.195416	1020.56442	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.38	1	90.589	90.089	91.089	0.20904								0	0	0	0.42693	1	37872	37872		1.1933	0	1				20946	1579	10291	10330	23990	23990					0.05495832453971161
LTFHNLQAF	9	Unmodified	_LTFHNLQAF_					0	0	0			REV__ENST00000471390.5_1_1:43002943-43047151:+|nuORF	REV__ENST00000471390.5_1_1:43002943-43047151:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7867919802666	2	545.787641	1089.56073	2.2617	0.0012344	0.72138	0.00039372	2.9831	0.0016282	545.7880486528005	44.154	0.56828	46.098	45.831	46.399	1.9438					63	17	5	0	0	0	0.68551	1	18624	18624		7.9102	1.187	1	53611000	+		20947	8182	10292	10331	23991	23991					0.019531626801381208
LTFISKWYTWT	11	Unmodified	_LTFISKWYTWT_					0	0	0			REV__nc|ENSG00000102383|Q96MV8-2|ZDHHC15	REV__nc|ENSG00000102383|Q96MV8-2|ZDHHC15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	723.8821899294853	2	723.37682	1444.73909	1.9088	0.0013808	1.8758	0.0013569	3.7847	0.0027377	723.3785016070793	72.281	0.30922	73.611	73.423	73.732	1.3297					22	9	3	0	0	0	0.74096	1	30324	30324		17.113	0.96379	1	1780700	+		20948	9070	10293	10332	23992	23992					0.03450787808515088
LTFISKWYTWT	11	Unmodified	_LTFISKWYTWT_					0	0	0			REV__nc|ENSG00000102383|Q96MV8-2|ZDHHC15	REV__nc|ENSG00000102383|Q96MV8-2|ZDHHC15	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	723.37682	1444.73909	1.9088	0.0013808	1.8758	0.0013569	3.7847	0.0027377	723.3785016070793	72.281	0.30922	73.611	73.423	73.732	1.3297	-0.003168	-0.00069129	NaN	17.113	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1780700	+		20949	9070	10293	10332							0.03450787808515088
LTFKDMPNL	9	Unmodified	_LTFKDMPNL_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7831298708916	2	539.78371	1077.55287	1.4375	0.00077593	0.19217	0.00010373	1.6297	0.00087967	539.7834477530818	77.63	0.89089	79.381	79.041	79.932	1.7514					90	28	5	0	0	0	0.46905	1	32568	32568		16.942	0	1	11449000	+		20950	10469	10294	10333	23993	23993					0.017192673683439352
LTFKIFLVI	9	Unmodified	_LTFKIFLVI_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3566161990166	2	547.354628	1092.6947	2.6221	0.0014352	0.63157	0.00034569	3.2537	0.0017809	547.3552453283352	90.316	0.94907	90.525	90.21	91.159	0.20903					72	29	3	0	0	0	0.44512	1	37967	37967		18.146	0.011366	1	3717500			20951	305	10295	10334	23994	23994					0.15206428452961518
LTFKIFLVI	9	Unmodified	_LTFKIFLVI_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3580810427666	2	547.354628	1092.6947	4.9736	0.0027223	-0.254	-0.00013903	4.7196	0.0025833	547.3545498056475	89.329	2.0347	90.349	90.074	92.109	1.0199					159	63	4	0	0	0	0.23535	1	38021	38021		29.082	0.59474	1	15924000			20952	305	10295	10334	23995	23995					0.15206428452961518
LTFLWYFYRDP	11	Unmodified	_LTFLWYFYRDP_					0	0	0		nc|ENSG00000171044|Q5GH73-2|XKR6;ENSG00000171044|ENST00000416569|XKR6	nc|ENSG00000171044|Q5GH73-2|XKR6	nc|ENSG00000171044|Q5GH73-2|XKR6	MSMS	GG20161007_CRH_Patient100_W632_01	3	760.7628661990166	2	760.88227	1519.74999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.585	1	99.782	99.282	100.28	0.19767								0	0	0	0.63772	1	41922	41922		9.3831	4.0862	1				20953	4174	10296	10335	23996	23996					0.010901901827992333
LTFPVRDGV	9	Unmodified	_LTFPVRDGV_					0	0	0		nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;ENSG00000108175|ENST00000334512|ZMIZ1;ENST00000478045.5_1_7:44799906-44801193:+|nuORF;ZMIZ2|p.L467Sfs*96|1|0.33|ENSG00000122515|chr7:44761707-44761708|-/T|frameshift_variant;ENST00000463056.5_1_7:44799906-44807219:+|nuORF;ZMIZ2|p.I660Rfs*6|1|0.03|ENSG00000122515|chr7:44764988-44764989|-/CAGGGTCATCT|frameshift_variant;ZMIZ2|p.G659Vfs*11|1|0.04|ENSG00000122515|chr7:44764987-44764988|-/TTAT|frameshift_variant;nc|ENSG00000122515|Q8NF64-3|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;ENSG00000122515|ENST00000309315|ZMIZ2	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2828857302666	2	502.282192	1002.54983	2.4439	0.0012275	0.3782	0.00018996	2.8221	0.0014175	502.2823391392591	41.127	0.40905	42.452	42.241	42.65	1.3254					30	12	3	0	0	0	0.3091	2	17265	17217;17265		24.991	1.2156	1	2296500			20954	1623	10297	10336	23997;23998	23998					0.048657603058586574
LTFPVRDGV	9	Unmodified	_LTFPVRDGV_					0	0	0		nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1;ENSG00000108175|ENST00000334512|ZMIZ1;ENST00000478045.5_1_7:44799906-44801193:+|nuORF;ZMIZ2|p.L467Sfs*96|1|0.33|ENSG00000122515|chr7:44761707-44761708|-/T|frameshift_variant;ENST00000463056.5_1_7:44799906-44807219:+|nuORF;ZMIZ2|p.I660Rfs*6|1|0.03|ENSG00000122515|chr7:44764988-44764989|-/CAGGGTCATCT|frameshift_variant;ZMIZ2|p.G659Vfs*11|1|0.04|ENSG00000122515|chr7:44764987-44764988|-/TTAT|frameshift_variant;nc|ENSG00000122515|Q8NF64-3|ZMIZ2;nc|ENSG00000122515|Q8NF64-2|ZMIZ2;ENSG00000122515|ENST00000309315|ZMIZ2	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2843810915947	2	502.282192	1002.54983	1.8302	0.00091929	0.56025	0.0002814	2.3905	0.0012007	502.28271527173735	40.75	0.34729	42.643	42.42	42.768	1.8927					26	10	3	0	0	0	0.15456	2	17056	17056;17104		38.176	0.97039	1	2125900			20955	1623	10297	10336	23999;24000	23999					0.048657603058586574
LTFYEPSIL	9	Unmodified	_LTFYEPSIL_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7933227419853	2	541.792058	1081.56956	4.2139	0.002283	-0.88146	-0.00047757	3.3324	0.0018055	541.7914596929016	94.288	0.465	95.029	94.764	95.229	0.74124					30	14	3	0	0	0	0.37357	1	39694	39694		21.747	2.3847	1	2752700			20956	1345	10298	10337	24001	24001					0.032040915259585745
LTFYEPSIL	9	Unmodified	_LTFYEPSIL_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7946044802666	2	541.792058	1081.56956	3.3077	0.0017921	-1.4682	-0.00079545	1.8395	0.00099662	541.791287320187	93.797	0.43447	95.074	94.859	95.294	1.277					34	13	3	0	0	0	0.37357	1	39420	39420		21.747	3.6117	1	1788000			20957	1345	10298	10337	24002	24002					0.032040915259585745
LTGDIVEKL	9	Unmodified	_LTGDIVEKL_					0	0	0			REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	REV__tr|A0A7D6ZI17|A0A7D6ZI17_9CLOTDNAtopoisomerase(ATP-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=HZF06_05265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2904846072197	2	494.289682	986.564812	2.6685	0.001319	-3.2879	-0.0016252	-0.61939	-0.00030616	494.2885429598189	62.647	0.49574	64.592	64.438	64.934	1.9444					19	15	2	0	0	0	0.075994	1	26290	26290		57.722	1.5449	1	1799700	+		20958	15658	10299	10338	24003	24003					0.07099207383191697
LTGDMPILL	9	Unmodified	_LTGDMPILL_					0	0	0		tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7762328982353	2	486.775354	971.536154	2.3503	0.0011441	2.7153	0.0013218	5.0656	0.0024658	486.77610092493865	84.174	0.43369	84.174	83.966	84.399	0					22	13	2	0	0	0	0.46905	1	35124	35124		16.942	1.0951	1	1720300			20959	16602	10300	10339	24004	24004					0.049247664824065396
LTGDMPILL	9	Unmodified	_LTGDMPILL_					0	0	0		tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.5430786013603	1	972.543431	971.536154	2.1518	0.0020927	-1.5486	-0.001506	0.60326	0.00058669	972.5418696948824	81.883	0.42882	82.163	81.968	82.397	0.2802					32	13	3	0	0	0	0.09539	2	34257	34210;34257		50.855	10.406	1	4162400			20960	16602	10300	10339	24005;24006	24006					0.049247664824065396
LTGDMPILL	9	Unmodified	_LTGDMPILL_					0	0	0		tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.5470458865166	1	972.543431	971.536154	2.6647	0.0025915	-0.72401	-0.00070414	1.9407	0.0018874	972.5429111970449	80.908	0.51419	82.141	81.894	82.408	1.2332					45	16	4	0	0	0	0.059546	3	33959	33910;33959;34014		64.236	22.142	1	17044000			20961	16602	10300	10339	24007;24008;24009	24008					0.049247664824065396
LTGDMPILL	9	Unmodified	_LTGDMPILL_					0	0	0		tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5437499880791	1	972.543431	971.536154	1.2972	0.0012616	-0.78426	-0.00076273	0.51291	0.00049883	972.5426423854386	80.38	0.53802	82.097	81.908	82.446	1.7167					41	17	3	0	0	0	0.076627	2	33722	33722;33774		57.471	27.89	1	16048000			20962	16602	10300	10339	24010;24011	24010					0.049247664824065396
LTGDMPILL	9	Unmodified	_LTGDMPILL_					0	0	0		tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	tr|A0A553SSC1|A0A553SSC1_NIACIUreacarboxylaseOS=NialliacirculansOX=1397GN=ucaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5477783083916	1	972.543431	971.536154	3.1228	0.0030371	1.7359	0.0016883	4.8588	0.0047254	972.5449663611058	82.24	0.34683	83.91	83.734	84.081	1.67					28	10	4	0	0	0	0.10294	2	34503	34503;34544		48.346	12.302	1	7160100			20963	16602	10300	10339	24012;24013	24012					0.049247664824065396
LTGECENECII	11	Unmodified	_LTGECENECII_					0	0	0			REV__SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	REV__SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.2701904177666	2	612.267764	1222.52097	1.595	0.00097659	2.6216	0.0016051	4.2166	0.0025817	612.7706981408389	71.256	1.4163	73.08	72.608	74.024	1.824					117	45	4	0	0	0	0.90709	1	29839	29839		9.3831	0.63772	1	3377000	+		20964	11816	10301	10340	24014	24014					-0.08138513167750716
LTGGALLA	8	Unmodified	_LTGGALLA_					0	0	0		ENSG00000146267|ENST00000389677|FAXC	ENSG00000146267|ENST00000389677|FAXC	ENSG00000146267|ENST00000389677|FAXC	MSMS	GG20161007_CRH_Patient100_A02_02	2	358.2215759158134	2	358.221072	714.42759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.187	1	70.509	70.009	71.009	0.32224								0	0	0	1.0178	1	29376	29376		2.8892	0	1				20965	3144	10302	10341	24015	24015					0.058953432942871586
LTGPTEKLDPP	11	Unmodified	_LTGPTEKLDPP_					0	0	0			REV__nc|ENSG00000147526|O75410-3|TACC1	REV__nc|ENSG00000147526|O75410-3|TACC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3181640505791	2	584.316428	1166.6183	1.8893	0.0011039	-1.1838	-0.0006917	0.70548	0.00041222	584.3163306814344	54.818	0.33045	55.139	54.989	55.32	0.32088					23	11	3	0	0	0	0.92747	1	22981	22981		8.1555	2.4237	1	2859800	+		20966	10327	10303	10342	24016	24016					0.04165960095042465
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3180419802666	2	555.319306	1108.62406	2.7009	0.0014999	-3.0362	-0.001686	-0.33522	-0.00018615	555.3175766131332	103.75	1.21	103.81	102.94	104.15	0.059502					87	55	3	0	0	0	1.0214	1	43263	43263		2.4985	0.65425	1	48397000			20967	569	10304	10343	24017	24017					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3238403201103	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.26	1	101.45	100.95	101.95	0.19076								0	0	0	0.63775	1	42577	42577		2.2828	0.43854	1				20968	569	10304	10343	24018	24018					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3232299685478	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.36	1	101.55	101.05	102.05	0.19076								0	0	0	0.63775	1	42619	42619		2.2828	0.43854	1				20969	569	10304	10343	24019	24019					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3230468630791	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.48	1	101.67	101.17	102.17	0.19076								0	0	0	0.63775	1	42668	42668		2.2828	0.43854	1				20970	569	10304	10343	24020	24020					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3227416872978	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.58	1	101.77	101.27	102.27	0.19076								0	0	0	0.63775	1	42708	42708		2.2828	0.22302	1				20971	569	10304	10343	24021	24021					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3215209841728	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.67	1	101.86	101.36	102.36	0.19076								0	0	0	0.63775	1	42747	42747		2.2828	0.22302	1				20972	569	10304	10343	24022	24022					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3188964724541	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.77	1	101.97	101.47	102.47	0.19076								0	0	0	0.63775	1	42791	42791		2.2828	0.43854	1				20973	569	10304	10343	24023	24023					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3184692263603	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.9	1	102.09	101.59	102.59	0.19076								0	0	0	0.63775	1	42844	42844		2.2828	0.43854	1				20974	569	10304	10343	24024	24024					0.07409103397367289
LTGSVPVHAKT	11	Unmodified	_LTGSVPVHAKT_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000467936.5_1_3:45542057-45579920:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3177368044853	2	555.319306	1108.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102	1	102.19	101.69	102.69	0.19076								0	0	0	0.63775	1	42892	42892		2.2828	0.43854	1				20975	569	10304	10343	24025	24025					0.07409103397367289
LTHALFEEL	9	Unmodified	_LTHALFEEL_					0	0	0		ENST00000439846.1_1_3:19982722-19982806:-|nuORF	ENST00000439846.1_1_3:19982722-19982806:-|nuORF	ENST00000439846.1_1_3:19982722-19982806:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1643554568291	2	536.787307	1071.56006	2.6835	0.0014405	-2.3781	-0.0012765	0.30546	0.00016397	536.787551363713	77.086	0.35219	78.366	78.186	78.538	1.2809					21	10	3	0	0	0	0.11812	1	32299	32299		2.0598	0	1	896860			20976	6550	10305	10344	24026	24026					0.027143232404114315
LTHFDHYNQY	10	Unmodified	_LTHFDHYNQY_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7;nc|ENSG00000171316|Q9P2D1-4|CHD7;nc|ENSG00000171316|Q9P2D1-3|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	669.2995483279228	2	669.299101	1336.58365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.22	1	102.41	101.91	102.91	0.19076								0	0	0	0.66166	1	42986	42986		1.6526	0	1				20977	153	10306	10345	24027	24027					-0.07117862993050039
LTHLKPLK	8	Unmodified	_LTHLKPLK_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MSMS	GG20161007_CRH_Patient100_A02_02	2	317.2110168337822	3	317.211289	948.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.13	1	104.19	103.69	104.69	0.059502								0	0	0	1.0178	1	43853	43853		1.6526	0	1		+		20978	9708	10307	10346	24028	24028					0.13567531444834913
LTHLKPLK	8	Unmodified	_LTHLKPLK_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.2104064822197	3	317.211289	948.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.09	1	104.25	103.75	104.75	0.16055								0	0	0	1.0178	1	44030	44030		1.6526	0	1		+		20979	9708	10307	10346	24029	24029					0.13567531444834913
LTHLKPLK	8	Unmodified	_LTHLKPLK_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MSMS	GG20161007_CRH_Patient100_W632_02	4	317.2123596072197	3	317.211289	948.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.71	1	101.9	101.4	102.4	0.19076								0	0	0	1.0178	1	42762	42762		1.6526	0	1		+		20980	9708	10307	10346	24030	24030					0.13567531444834913
LTHRIWRLKLL	11	Unmodified	_LTHRIWRLKLL_					0	0	0		ENST00000438770.6_1_19:37742814-37746809:+|nuORF	ENST00000438770.6_1_19:37742814-37746809:+|nuORF	ENST00000438770.6_1_19:37742814-37746809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9873840212822	4	362.98577	1447.91397	1.1597	0.00042097	0.46377	0.00016834	1.6235	0.00058931	362.9860576598574	34.963	1.2235	35.263	34.602	35.825	0.29942					301	82	4	0	0	0	1.0402	5	14594	14594;14750;14793;14835;14874		0.08335	0	1	314680000			20981	6544	10308	10347	24031;24032;24033;24034;24035	24031					0.2079325246420467
LTHRIWRLKLL	11	Unmodified	_LTHRIWRLKLL_					0	0	0		ENST00000438770.6_1_19:37742814-37746809:+|nuORF	ENST00000438770.6_1_19:37742814-37746809:+|nuORF	ENST00000438770.6_1_19:37742814-37746809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6471435427666	3	483.645267	1447.91397	0.7334	0.0003547	2.9988	0.0014504	3.7322	0.0018051	483.64658448701994	30.819	0.56097	32.634	32.325	32.886	1.8151					66	18	4	0	0	0	1.039	1	12817	12817		0.45452	0.31463	1	17468000			20982	6544	10308	10347	24036	24036					0.2079325246420467
LTIDHVPIW	9	Unmodified	_LTIDHVPIW_					0	0	0		nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3055908083916	2	547.305667	1092.59678	1.8418	0.001008	-1.6509	-0.00090355	0.19087	0.00010446	547.3044952675236	66.1	0.48309	67.489	67.206	67.689	1.3888					37	15	3	0	0	0	0.026628	2	27732	27684;27732		92.822	25.478	1	14535000			20983	2617	10309	10348	24037;24038	24038					0.05418619857005069
LTIDHVPIW	9	Unmodified	_LTIDHVPIW_					0	0	0		nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3073608279228	2	547.305667	1092.59678	1.7442	0.00095462	-1.9098	-0.0010452	-0.16556	-9.0609E-05	547.3043100624366	65.604	0.42658	67.512	67.28	67.706	1.9085					38	13	4	0	0	0	0.013238	2	27486	27486;27535		104.8	40.563	1	15514000			20984	2617	10309	10348	24039;24040	24039					0.05418619857005069
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.2989990115166	2	568.297704	1134.58086	1.5577	0.00088523	0.60831	0.0003457	2.166	0.0012309	568.2979632125359	80.246	0.40576	80.246	80.041	80.447	0					26	12	3	0	0	0	0.17319	2	33435	33380;33435		52.268	24.64	1	1414500			20985	1687	10310	10349	24041;24042	24042					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1135.591601550579	1	1135.58813	1134.58086	1.9799	0.0022484	-2.7257	-0.0030953	-0.74576	-0.00084687	1135.5858521826221	80.233	0.28223	80.233	80.072	80.354	0					12	8	2	0	0	0	0.17319	1	33426	33426		52.268	14.294	1	809080			20986	1687	10310	10349	24043	24043					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.2966186404228	2	568.297704	1134.58086	1.7071	0.00097012	0.64304	0.00036544	2.3501	0.0013356	568.2979148123767	79.815	0.41187	80.115	79.909	80.321	0.30047					27	12	3	0	0	0	0.17319	2	33337	33337;33385		52.268	16.141	1	2338900			20987	1687	10310	10349	24044;24045	24044					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.2991821169853	2	568.297704	1134.58086	2.8523	0.001621	-0.42718	-0.00024277	2.4251	0.0013782	568.2979177646728	78.912	0.37544	80.179	79.972	80.347	1.2668					19	11	3	0	0	0	0.052892	1	33126	33126		88.904	27.546	1	5244700			20988	1687	10310	10349	24046	24046					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1135.588305652142	1	1135.58813	1134.58086	2.4181	0.002746	0.47066	0.00053448	2.8888	0.0032804	1135.5890661165718	78.942	0.31307	80.209	80.003	80.316	1.2668					18	9	3	0	0	0	0.12991	1	33145	33145		58.679	20.503	1	1961500			20989	1687	10310	10349	24047	24047					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.2983886599541	2	568.297704	1134.58086	2.2901	0.0013015	-0.13842	-7.8661E-05	2.1517	0.0012228	568.2978294776783	78.414	0.43476	80.149	79.978	80.413	1.735					27	13	3	0	0	0	0.051733	2	32932	32882;32932		78.149	32.128	1	6357000			20990	1687	10310	10349	24048;24049	24049					0.01894868829413099
LTIEDGIFEV	10	Unmodified	_LTIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1135.590869128704	1	1135.58813	1134.58086	2.0847	0.0023674	-0.034674	-3.9376E-05	2.05	0.002328	1135.5891990836412	78.469	0.24963	80.204	80.07	80.319	1.735					13	7	2	0	0	0	0.12991	1	32938	32938		58.679	12.658	1	1422100			20991	1687	10310	10349	24050	24050					0.01894868829413099
LTIIHLMTF	9	Unmodified	_LTIIHLMTF_					0	0	0			REV__tr|A0A553SMG7|A0A553SMG7_NIACIRodshape-determiningproteinMreDOS=NialliacirculansOX=1397GN=CEQ21_22590PE=4SV=1	REV__tr|A0A553SMG7|A0A553SMG7_NIACIRodshape-determiningproteinMreDOS=NialliacirculansOX=1397GN=CEQ21_22590PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3190185427666	2	544.81227	1087.60999	1.2855	0.00070035	-1.351	-0.00073607	-0.065567	-3.5722E-05	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.68551	1	30034	30034		7.9102	2.1497	1	6733700	+		20992	15018	10311	10350	24051	24051					0.06968734644715369
LTISAATRKE	10	Unmodified	_LTISAATRKE_					0	0	0		CON__Q1A7A4	CON__Q1A7A4	CON__Q1A7A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3178588747978	2	545.316763	1088.61897	1.4657	0.00079927	0.69295	0.00037787	2.1587	0.0011771	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.88022	1	30314	30314		3.5965	0	1	5427600		+	20993	354	10312	10351	24052	24052					0.07820799534783873
LTISKLKKS	9	Unmodified	_LTISKLKKS_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3394042849541	2	509.336967	1016.65938	3.5043	0.0017849	0.62152	0.00031656	4.1258	0.0021014	509.337045186255	108.99	0.22156	109.15	109.03	109.25	0.15898					26	10	3	0	0	0	0.83213	1	47223	47223		2.0598	0	1	54727000	+		20994	15846	10313	10352	24053	24053					0.15171765925197178
LTISKLKKS	9	Unmodified	_LTISKLKKS_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3391601443291	2	509.336967	1016.65938	3.4615	0.0017631	0.52188	0.00026581	3.9834	0.0020289	509.33719513748156	108.99	0.2664	109.14	108.99	109.26	0.1548					31	12	4	0	0	0	0.83213	2	47128	47128;47193		2.0598	0	1	52598000	+		20995	15846	10313	10352	24054;24055	24054					0.15171765925197178
LTISKLKKS	9	Unmodified	_LTISKLKKS_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	509.336967	1016.65938	3.5043	0.0017849	0.62152	0.00031656	4.1258	0.0021014	509.337045186255	108.99	0.22156	109.15	109.03	109.25	0.15898	0.0059595	5.8846E-05	NaN	2.0598	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54727000	+		20996	15846	10313	10352							0.15171765925197178
LTISKLKKS	9	Unmodified	_LTISKLKKS_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	509.336967	1016.65938	3.4615	0.0017631	0.52188	0.00026581	3.9834	0.0020289	509.33719513748156	108.99	0.2664	109.14	108.99	109.26	0.1548	-0.0059595	-4.266E-05	NaN	2.0598	31	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52598000	+		20997	15846	10313	10352							0.15171765925197178
LTIWARLVG	9	Unmodified	_LTIWARLVG_					0	0	0		ENST00000372189.7_1_9:134453434-134453743:-|nuORF	ENST00000372189.7_1_9:134453434-134453743:-|nuORF	ENST00000372189.7_1_9:134453434-134453743:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8173095583916	2	514.816202	1027.61785	1.933	0.00099512	1.4248	0.00073352	3.3578	0.0017286	514.816640203411	79.483	0.41425	79.784	79.623	80.037	0.30046					27	12	3	0	0	0	0.27148	1	33272	33272		26.884	1.4843	1	1759900			20998	6136	10314	10353	24056	24056					0.10514629956514909
LTIWLFKHRR	10	Unmodified	_LTIWLFKHRR_					0	0	0		SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant;SLC9A6|p.R97Sfs*17|1|0.09|ENSG00000198689|chrX:135985787-135985788|-/GCGTCGGCAGCAGTCCCCGA|frameshift_variant;nc|ENSG00000198689|Q92581-3|SLC9A6;nc|ENSG00000198689|Q92581-1|SLC9A6;ENSG00000198689|ENST00000630721|SLC9A6;nc|ENSG00000198689|Q92581|SLC9A6;nc|ENSG00000065923|Q96T83|SLC9A7;ENSG00000065923|ENST00000616978|SLC9A7	SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant	SLC9A6|p.A96Gfs*30|1|0.09|ENSG00000198689|chrX:135985786-135985787|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	456.7829162478447	3	457.278696	1368.81426	3.5051	0.0016028	1.1135	0.0005092	4.6186	0.002112	457.2801957701458	91.622	0.50615	92.949	92.707	93.213	1.3269					22	15	2	0	0	0	0.12549	1	38525	38525		3.5871	0.74377	1	723660			20999	15964	10315	10354	24057	24057					0.1446043485022983
LTKEHEKIL	9	Unmodified	_LTKEHEKIL_					0	0	0			REV__tr|A0A7D6ZR25|A0A7D6ZR25_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_02770PE=3SV=1	REV__tr|A0A7D6ZR25|A0A7D6ZR25_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_02770PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8296996951103	2	555.829506	1109.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.509	1	58.923	58.423	59.423	1.4145								0	0	0	0.18991	1	24110	24110		26.884	0	1		+		21000	15686	10316	10355	24058	24058					0.09402274057174509
LTKEHLIWLI	10	Unmodified	_LTKEHLIWLI_					0	0	0		ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5927001833916	3	422.592058	1264.75434	0.63894	0.00027001	0.5653	0.00023889	1.2042	0.0005089	422.5921838510224	36.29	0.4326	36.29	36.151	36.584	0					56	40	2	0	0	0	0.88031	1	15252	15252		3.5871	0.95582	1	10275000			21001	6508	10317	10356	24059	24059					0.13255699396381715
LTKEHLIWLI	10	Unmodified	_LTKEHLIWLI_					0	0	0		ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	ENST00000432471.6_2_8:38068046-38068208:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	422.592058	1264.75434	1.7303	0.00073122	-0.2623	-0.00011085	1.468	0.00062037	422.5917511406409	35.757	0.11955	36.059	36.018	36.137	0.30197	-0.11524	-0.00051729	NaN	3.5871	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15037000			21002	6508	10317	10356							0.13255699396381715
LTKKHKKKRR	10	Unmodified	_LTKKHKKKRR_					0	0	0		ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.134	1	15.134	14.634	15.634	0								0	0	0	0.66176	1	6281	6281		1.4819	1.0812	1				21003	1889	10318	10357	24060	24060					0.23019215007184357
LTKMKKTK	8	Unmodified	_LTKMKKTK_					0	0	0			REV__ENST00000225728.7_1_17:6547672-6547756:-|nuORF	REV__ENST00000225728.7_1_17:6547672-6547756:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.3138000369072	2	489.312438	976.610322	1.6309	0.00079803	1.3829	0.00067667	3.0138	0.0014747	489.31312168763304	79.04	0.88318	79.04	78.662	79.545	0					96	28	5	0	0	0	0.89181	1	32883	32883		0.6015	0	1	204060000	+		21004	12089	10319	10358	24061	24061					0.12108154364591428
LTKRLKAE	8	Unmodified	_LTKRLKAE_					0	0	0			REV__ENST00000608163.1_1_10:46215370-46222350:-|nuORF	REV__ENST00000608163.1_1_10:46215370-46222350:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2066833376884	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.92	1	105.09	104.59	105.59	0.16679								0	0	0	1.0178	1	44515	44515		3.5965	0	1		+		21005	14147	10320	10359	24062	24062					0.1166203957683365
LTKTAAPL	8	Unmodified	_LTKTAAPL_					0	0	0			REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|77|2|sense	REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|77|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	407.7552978396416	2	407.755278	813.496004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.934	1	61.934	61.434	62.434	0								0	0	0	1.0178	1	25822	25822		0.79363	0	1		+		21006	14297	10321	10360	24063	24063					0.08179587874133176
LTLADLLLL	9	Unmodified	_LTLADLLLL_					0	0	0		ENSG00000126262|ENST00000599180|FFAR2	ENSG00000126262|ENST00000599180|FFAR2	ENSG00000126262|ENST00000599180|FFAR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.8217651247978	2	492.820618	983.626684	3.4243	0.0016876	1.04	0.00051252	4.4643	0.0022001	492.8206447396514	98.958	0.21404	99.038	98.993	99.207	0.080376					8	6	2	0	0	0	0.069258	1	41439	41439		60.39	0	1	4167200			21007	2305	10322	10361	24064	24064					0.1342155880233804
LTLARLFVK	9	Unmodified	_LTLARLFVK_					0	0	0		nc|ENSG00000124615|Q9NZB8-6|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1;nc|ENSG00000124615|Q9NZB8-4|MOCS1;nc|ENSG00000124615|Q9NZB8-3|MOCS1;nc|ENSG00000124615|Q9NZB8-5|MOCS1;nc|ENSG00000124615|Q9NZB8-7|MOCS1;nc|ENSG00000124615|Q9NZB8-2|MOCS1;ENSG00000124615|ENST00000340692|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0703613162041	3	354.234093	1059.68045	-0.9732	-0.00034474	-0.25279	-8.9546E-05	-1.226	-0.00043429	354.5684664619284	57.082	0.29899	57.082	56.925	57.224	0					14	9	2	0	0	0	0.11916	1	23750	23750		0.96228	0	1	986320			21008	7863	10323	10362	24065	24065					0.15299776024676248
LTLCLRPVL	9	Unmodified	_LTLCLRPVL_					0	0	0			REV__ENSG00000166821|ENST00000300056|PEX11A	REV__ENSG00000166821|ENST00000300056|PEX11A	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3198730349541	2	514.320263	1026.62597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.468	1	59.886	59.386	60.386	1.4181								0	0	0	0.29347	1	24514	24514		19.257	2.1441	1		+		21009	10840	10324	10363	24066	24066					0.11372440881632428
LTLDDLAAV	9	Unmodified	_LTLDDLAAV_					0	0	0		tr|A0A553SNQ3|A0A553SNQ3_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24975PE=4SV=1	tr|A0A553SNQ3|A0A553SNQ3_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24975PE=4SV=1	tr|A0A553SNQ3|A0A553SNQ3_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_24975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	930.5167114138603	1	930.514239	929.506963	3.2063	0.0029835	-0.010007	-9.3118E-06	3.1963	0.0029742	930.5138649063622	72.582	0.55176	73.911	73.612	74.164	1.3297					48	17	4	0	0	0	0.022807	2	30435	30435;30486		97.075	0	1	10960000			21010	16431	10325	10364	24067;24068	24067					0.03938945457753107
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2983276247978	2	495.297507	988.580462	1.6379	0.00081124	-0.80091	-0.00039669	0.83697	0.00041455	495.2971691971563	92.788	1.4271	92.788	92.473	93.9	0					108	45	5	0	0	0	0.09539	5	38742	38693;38742;38782;38833;38873		50.855	22.368	1	84094000	+		21011	15693	10326	10365	24069;24070;24071;24072;24073	24070					0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2984496951103	2	495.297507	988.580462	3.3075	0.0016382	-2.3244	-0.0011512	0.98311	0.00048693	495.2963637998555	92.469	1.1373	92.638	92.314	93.451	0.16835					100	35	5	0	0	0	0.09539	6	38638	38638;38686;38736;38775;38818;38875		50.855	22.368	1	68442000	+		21012	15693	10326	10365	24074;24075;24076;24077;24078;24079	24074					0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2989074587822	2	495.297507	988.580462	4.1473	0.0020541	-2.572	-0.0012739	1.5753	0.00078024	495.2963147819647	91.746	1.1979	92.682	92.275	93.473	0.93623					117	37	5	0	0	0	0.09539	6	38521	38521;38569;38621;38660;38699;38745		50.855	22.368	1	134660000	+		21013	15693	10326	10365	24080;24081;24082;24083;24084;24085	24080					0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2990600466728	2	495.297507	988.580462	3.3693	0.0016688	-1.8685	-0.00092548	1.5007	0.00074331	495.2966298184994	91.335	1.2322	92.701	92.342	93.574	1.366					120	38	5	0	0	0	0.069258	6	38398	38352;38398;38450;38502;38540;38580		60.39	24.345	1	125790000	+		21014	15693	10326	10365	24086;24087;24088;24089;24090;24091	24087					0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	495.297507	988.580462	3.3075	0.0016382	-2.3244	-0.0011512	0.98311	0.00048693	495.2963637998555	92.469	1.1373	92.638	92.314	93.451	0.16835	-0.064356	-0.0004562	NaN	60.39	100	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68442000	+		21015	15693	10326	10365							0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.297507	988.580462	4.1473	0.0020541	-2.572	-0.0012739	1.5753	0.00078024	495.2963147819647	91.746	1.1979	92.682	92.275	93.473	0.93623	-0.020106	-0.0007015	NaN	60.39	117	37	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134660000	+		21016	15693	10326	10365							0.08571493900228688
LTLDLTKSV	9	Unmodified	_LTLDLTKSV_					0	0	0			REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	REV__tr|A0A7D6ZRQ2|A0A7D6ZRQ2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	495.297507	988.580462	3.3693	0.0016688	-1.8685	-0.00092548	1.5007	0.00074331	495.2966298184994	91.335	1.2322	92.701	92.342	93.574	1.366	-0.0012667	-4.6557E-06	NaN	60.39	120	38	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	125790000	+		21017	15693	10326	10365							0.08571493900228688
LTLDYQCKVI	10	Unmodified	_LTLDYQCKVI_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3231078982353	2	598.323199	1194.63185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.362	1	54.334	53.834	54.834	1.9722								0	0	0	0.64929	1	21940	21940		14.838	4.0143	1		+		21018	10496	10327	10366	24092	24092					0.04231494602618113
LTLFPRRIF	9	Unmodified	_LTLFPRRIF_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2409545779228	3	388.241359	1161.70225	1.0236	0.00039741	-0.64736	-0.00025133	0.37625	0.00014607	388.24047163078933	54.23	0.64482	55.635	55.35	55.995	1.4048					51	20	3	0	0	0	0.22861	1	22728	22728		29.841	4.8496	1	3990500			21019	4351	10328	10367	24093	24093					0.12786580773263267
LTLKNLGKEHL	11	Unmodified	_LTLKNLGKEHL_					0	0	0		ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1958495974541	4	317.194857	1264.75032	0.74878	0.00023751	2.2606	0.00071704	3.0093	0.00095455	317.1954584195939	35.724	0.53128	36.026	35.734	36.265	0.30197					97	49	3	0	0	0	1.0254	2	14972	14972;15094		2.2527	0.51045	1	35490000			21020	6994	10329	10368	24094;24095	24094					0.12853609902640528
LTLKNLGKEHL	11	Unmodified	_LTLKNLGKEHL_					0	0	0		ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	ENST00000504090.1_1_5:110700657-110700843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.4464599490166	4	317.194857	1264.75032	0.76771	0.00024351	2.1606	0.00068533	2.9283	0.00092885	317.4463394663959	36.076	0.39721	36.378	36.172	36.569	0.30197					83	35	4	0	0	0	1.0254	1	15134	15134		2.2527	0.16876	1	48084000			21021	6994	10329	10368	24096	24096					0.12853609902640528
LTLLDLSSNKL	11	Unmodified	_LTLLDLSSNKL_					0	0	0		ENSG00000181754|ENST00000369864|AMIGO1;AMIGO1|p.L223Pfs*6|1|0.5|ENSG00000181754|chr1:109508245-109508246|-/G|frameshift_variant	ENSG00000181754|ENST00000369864|AMIGO1	ENSG00000181754|ENST00000369864|AMIGO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2445556521416	3	406.243094	1215.70745	1.8157	0.00073763	0.66729	0.00027108	2.483	0.0010087	406.24345348475487	40.051	0.3121	40.364	40.196	40.508	0.31263					26	9	4	0	0	0	0.24501	1	16833	16833		29.281	8.41	1	3638300			21022	4585	10330	10369	24097	24097					0.10822795054582457
LTLLDLSSNKL	11	Unmodified	_LTLLDLSSNKL_					0	0	0		ENSG00000181754|ENST00000369864|AMIGO1;AMIGO1|p.L223Pfs*6|1|0.5|ENSG00000181754|chr1:109508245-109508246|-/G|frameshift_variant	ENSG00000181754|ENST00000369864|AMIGO1	ENSG00000181754|ENST00000369864|AMIGO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.2433959841728	3	406.243094	1215.70745	1.4272	0.00057978	-0.416	-0.000169	1.0112	0.00041079	406.2429775450225	38.619	0.32664	39.915	39.712	40.038	1.2961					26	10	3	0	0	0	0.24501	2	16214	16170;16214		23.964	3.3832	1	7027000			21023	4585	10330	10369	24098;24099	24099					0.10822795054582457
LTLLDLSSNKL	11	Unmodified	_LTLLDLSSNKL_					0	0	0		ENSG00000181754|ENST00000369864|AMIGO1;AMIGO1|p.L223Pfs*6|1|0.5|ENSG00000181754|chr1:109508245-109508246|-/G|frameshift_variant	ENSG00000181754|ENST00000369864|AMIGO1	ENSG00000181754|ENST00000369864|AMIGO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2437316775322	3	406.243094	1215.70745	0.79679	0.00032369	-0.25471	-0.00010347	0.54208	0.00022022	406.2429863896212	37.987	0.30263	39.808	39.64	39.942	1.8202					24	9	3	0	0	0	0.24501	1	15964	15964		29.281	8.41	1	7759200			21024	4585	10330	10369	24100	24100					0.10822795054582457
LTLNVRLCN	9	Unmodified	_LTLNVRLCN_					0	0	0			REV__nc|ENSG00000198000|Q76FK4-2|NOL8	REV__nc|ENSG00000198000|Q76FK4-2|NOL8	MSMS	GG20161007_CRH_Patient100_A02_02	2	349.1977722048759	3	349.198943	1044.575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.25	1	101.31	100.81	101.81	0.067009								0	0	0	0.42693	1	42390	42390		2.4985	0.59211	1		+		21025	11698	10331	10370	24101	24101					0.05449491836770903
LTLQVKKKKKK	11	Unmodified	_LTLQVKKKKKK_					0	0	0			REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	REV__ENST00000527958.5_1_11:117041336-117041564:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	671.2793456912041	2	671.468847	1340.92314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.146	1	97.431	96.931	97.931	0.28442								0	0	0	0.63775	1	40874	40874		1.3295	0	1		+		21026	13681	10332	10371	24102	24102					0.26631601029862395
LTLRYMQA	8	Unmodified	_LTLRYMQA_					0	0	0			REV__ENSG00000183020|ENST00000448903|AP2A2	REV__ENSG00000183020|ENST00000448903|AP2A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.2739135622978	2	498.27077	994.526987	1.9944	0.00099375	4.0208	0.0020034	6.0151	0.0029972	498.27273079715894	69.364	0.31586	69.686	69.562	69.878	0.32223					13	9	2	0	0	0	0.84871	1	29049	29049		16.942	3.4344	1	619880	+		21027	11372	10333	10372	24103	24103					0.029504179167247457
LTLSQHHQRR	10	Unmodified	_LTLSQHHQRR_					0	0	0		ENST00000541110.5_2_6:42196308-42200505:-|nuORF	ENST00000541110.5_2_6:42196308-42200505:-|nuORF	ENST00000541110.5_2_6:42196308-42200505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	425.9074279665947	3	425.90581	1274.6956	0.085556	3.6439E-05	4.3628	0.0018582	4.4484	0.0018946	425.90712039327644	21.331	0.30801	21.331	21.191	21.499	0					14	9	2	0	0	0	0.88031	1	8852	8852		3.5871	1.8448	1	703840			21028	7216	10334	10373	24104	24104					0.06924035874612855
LTLSQHHQRR	10	Unmodified	_LTLSQHHQRR_					0	0	0		ENST00000541110.5_2_6:42196308-42200505:-|nuORF	ENST00000541110.5_2_6:42196308-42200505:-|nuORF	ENST00000541110.5_2_6:42196308-42200505:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	425.90581	1274.6956	0.95693	0.00040756	2.7211	0.0011589	3.678	0.0015665	425.9070686058222	20.905	0.31228	21.115	20.915	21.227	0.21024	-0.0033895	-0.00022015	NaN	3.5871	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	877250			21029	7216	10334	10373							0.06924035874612855
LTLSRRPRTSL	11	Unmodified	_LTLSRRPRTSL_					0	0	0			REV__nc|ENSG00000006638|P21731-2|TBXA2R	REV__nc|ENSG00000006638|P21731-2|TBXA2R	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3975097537041	2	650.39641	1298.77827	2.4864	0.0016171	-1.3831	-0.00089957	1.1033	0.00071756	650.395403603106	80.507	2.3996	81.759	80.925	83.325	1.2512					173	77	4	0	0	0	0.91768	1	33700	33700		8.7454	2.5396	1	5912000	+		21030	14380	10335	10374	24105	24105					0.14082932882752175
LTLTSFNSL	9	Unmodified	_LTLTSFNSL_					0	0	0			REV__ENSG00000143819|ENST00000272167|EPHX1	REV__ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.2743102908134	2	498.274032	994.533512	2.0844	0.0010386	-2.7344	-0.0013625	-0.65	-0.00032388	498.2726219441652	68.85	0.31373	69.172	69.031	69.344	0.32224					17	9	2	0	0	0	0.22154	1	28871	28871		30.637	7.4881	1	992590	+		21031	10224	10336	10375	24106	24106					0.036026343490902946
LTLVIVTSL	9	Unmodified	_LTLVIVTSL_					0	0	0		sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.8154785037041	2	479.812793	957.611034	4.5311	0.0021741	0.20141	9.6637E-05	4.7325	0.0022707	479.8129249996881	89.401	0.27661	90.805	90.614	90.891	1.4045					14	8	2	0	0	0	0.59203	1	37667	37667		11.64	0	1	712750			21032	16000	10337	10376	24107	24107					0.13053272285299045
LTLVIVTSL	9	Unmodified	_LTLVIVTSL_					0	0	0		sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	479.812793	957.611034	2.4375	0.0011695	1.3852	0.00066462	3.8227	0.0018342	479.81369878846664	91.172	0.18763	91.172	91.094	91.281	0	0.23076	0.001342	NaN	11.64	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218150			21033	16000	10337	10376							0.13053272285299045
LTLVIVTSL	9	Unmodified	_LTLVIVTSL_					0	0	0		sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	sp|P16809|IR11_HCMVAViralFc-gammareceptor-likeproteinIR11OS=Humancytomegalovirus(strainAD169)OX=10360PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	479.812793	957.611034	5.0078	0.0024028	-0.34068	-0.00016346	4.6671	0.0022393	479.81259825332336	89.828	0.34544	90.847	90.676	91.022	1.0199	-0.094285	-0.00031415	NaN	11.64	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1459700			21034	16000	10337	10376							0.13053272285299045
LTLWETHFG	9	Unmodified	_LTLWETHFG_					0	0	0			REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.3290283083916	2	552.279649	1102.54475	1.8102	0.00099975	4.4614	0.0024639	6.2716	0.0034637	552.784762720356	67.783	0.35723	69.161	68.946	69.303	1.3778					25	11	3	0	0	0	0.11518	1	28494	28494		11.64	6.4096	1	1466700	+		21035	13671	10338	10377	24108	24108					-0.0024254355678294814
LTLWETHFG	9	Unmodified	_LTLWETHFG_					0	0	0			REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.279649	1102.54475	1.4309	0.00079025	3.1107	0.001718	4.5416	0.0025082	552.2813884813296	68.938	0.18697	69.26	69.125	69.312	0.32224	0.067775	-0.00059304	NaN	11.64	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	281890	+		21036	13671	10338	10377							-0.0024254355678294814
LTLWETHFG	9	Unmodified	_LTLWETHFG_					0	0	0			REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	REV__ENST00000526766.1_1_11:112051504-112052349:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.279649	1102.54475	1.1299	0.00062401	3.7216	0.0020554	4.8515	0.0026794	552.7837986995166	67.273	0.30104	69.156	68.98	69.281	1.8826	-0.036655	8.1728E-05	NaN	11.64	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1002900	+		21037	13671	10338	10377							-0.0024254355678294814
LTLWFDYGH	9	Unmodified	_LTLWFDYGH_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	575.8179809451103	2	576.279649	1150.54475	2.89	0.0016654	-2.5031	-0.0014425	0.38686	0.00022294	576.2787508657077	63.878	0.65427	65.806	65.296	65.95	1.928					28	20	2	0	0	0	0.11518	1	26678	26678		7.2892	3.3448	1	720090			21038	5084	10339	10378	24109	24109					-0.024505435567562017
LTLWTSLQV	9	Unmodified	_LTLWTSLQV_					0	0	0			REV__ENST00000429841.1_1_X:135721857-135724298:+|nuORF	REV__ENST00000429841.1_1_X:135721857-135724298:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8057128787041	2	530.8055	1059.59645	1.3467	0.00071482	0.050232	2.6664E-05	1.3969	0.00074149	530.8056654504567	56.042	0.61296	58.01	57.69	58.303	1.9684					64	19	4	0	0	0	0.34572	1	23611	23611		23.148	2.6948	1	37458000	+		21039	13018	10340	10379	24110	24110					0.0690320013713972
LTMQNLNDR	9	Unmodified	_LTMQNLNDR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7778198122978	2	552.776948	1103.53934	0.84807	0.00046879	-1.0414	-0.00057566	-0.19332	-0.00010686	552.7764659648589	21.263	0.26774	22.407	22.265	22.532	1.1432					17	8	3	0	0	0	0.093705	1	8877	8877		51.415	0	1	2197100		+	21040	344	10341	10380	24111	24111					-0.008285904109015974
LTMQNLNDR	9	Unmodified	_LTMQNLNDR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7773925662041	2	552.776948	1103.53934	0.36252	0.00020039	0.18602	0.00010283	0.54853	0.00030322	552.7773361995803	20.881	0.26971	22.455	22.32	22.589	1.5748					15	8	3	0	0	0	0.071837	1	8694	8694		59.368	0	1	1900300		+	21041	344	10341	10380	24112	24112					-0.008285904109015974
LTMTNWLTV	9	Unmodified	_LTMTNWLTV_					0	0	0			REV__ENSG00000064218|ENST00000190165|DMRT3	REV__ENSG00000064218|ENST00000190165|DMRT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7830688357353	2	539.78371	1077.55287	2.4196	0.0013061	-3.1767	-0.0017147	-0.75708	-0.00040866	539.781995431163	59.402	0.26439	59.728	59.604	59.869	0.32553					15	8	2	0	0	0	0.53525	1	24943	24943		13.906	1.3745	1	2326800	+		21042	8658	10342	10381	24113	24113					0.017192673683439352
LTNFFRELRER	11	Unmodified	_LTNFFRELRER_					0	0	0		tr|A0A553SHK0|A0A553SHK0_NIACItRNA-specificadenosinedeaminaseOS=NialliacirculansOX=1397GN=tadAPE=3SV=1	tr|A0A553SHK0|A0A553SHK0_NIACItRNA-specificadenosinedeaminaseOS=NialliacirculansOX=1397GN=tadAPE=3SV=1	tr|A0A553SHK0|A0A553SHK0_NIACItRNA-specificadenosinedeaminaseOS=NialliacirculansOX=1397GN=tadAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	740.9017211794853	2	740.904599	1479.79465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.861	1	100.06	99.559	100.56	0.19767								0	0	0	0.63775	1	42033	42033		5.2969	2.3016	1				21043	16155	10343	10382	24114	24114					0.07394014048850295
LTNILYENI	9	Unmodified	_LTNILYENI_					0	0	0		ENST00000509089.1_1_4:62453105-62542754:+|nuORF	ENST00000509089.1_1_4:62453105-62542754:+|nuORF	ENST00000509089.1_1_4:62453105-62542754:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7996703982353	2	546.800414	1091.58628	2.696	0.0014742	-0.23147	-0.00012657	2.4646	0.0013476	546.7997880241566	72.216	0.33723	74.026	73.861	74.198	1.8101					24	10	3	0	0	0	0.10993	1	30286	30286		46.021	3.9264	1	3267600			21044	7020	10344	10383	24115	24115					0.04414592411899321
LTNKKKYRFR	10	Unmodified	_LTNKKKYRFR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.4597656130791	4	339.208299	1352.80409	-1.5694	-0.00053234	2.9245	0.00099201	1.3551	0.00045967	339.2089405362541	41.468	1.43	41.468	40.612	42.042	0					110	44	3	0	0	0	0.89803	2	17271	17271;17318		1.5923	0.48253	1	2816400			21045	3425;7900	10345	10384	24116;24117	24116					0.14179827124985422
LTNKVPIK	8	Unmodified	_LTNKVPIK_					0	0	0		ENSG00000113532|ENST00000231461|ST8SIA4	ENSG00000113532|ENST00000231461|ST8SIA4	ENSG00000113532|ENST00000231461|ST8SIA4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	456.3352233767509	2	456.797478	911.580402	3.3542	0.0015322	0.93253	0.00042598	4.2867	0.0019582	456.79797672560363	109.24	0.13837	109.29	109.22	109.36	0.048843					8	5	2	0	0	0	2.3239	1	47105	47105		2.0598	0	1	3611400			21046	1825	10346	10385	24118	24118					0.1210753869089558
LTNLYNRKYFF	11	Unmodified	_LTNLYNRKYFF_					0	0	0		tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.9312621951103	3	493.597871	1477.77178	2.3765	0.001173	-1.7112	-0.00084465	0.66531	0.00032839	493.93118870041906	52.545	0.42833	52.869	52.619	53.047	0.32409					25	14	2	0	0	0	0.98969	1	21998	21998		4.4062	0.28952	1	4019600			21047	16373	10347	10386	24119	24119					0.05200994931351488
LTNLYNRKYFF	11	Unmodified	_LTNLYNRKYFF_					0	0	0		tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.5980712771416	3	493.597871	1477.77178	0.47825	0.00023607	-0.58094	-0.00028675	-0.10268	-5.0683E-05	493.9318930239673	50.65	0.51767	52.625	52.425	52.942	1.9753					57	16	6	0	0	0	1.0224	1	21180	21180		2.4348	0.18206	1	7115300			21048	16373	10347	10386	24120	24120					0.05200994931351488
LTNLYQVIF	9	Unmodified	_LTNLYQVIF_					0	0	0			REV__sp|F5H8Q3|UL148_HCMVMMembraneproteinUL148OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148PE=3SV=1	REV__sp|F5H8Q3|UL148_HCMVMMembraneproteinUL148OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8320800662041	2	555.813325	1109.6121	0.64204	0.00035685	3.5152	0.0019538	4.1572	0.0023106	555.8153238864803	56.938	0.15041	58.906	58.814	58.964	1.9684					6	4	2	0	0	0	0.11669	1	23863	23863		43.772	5.5968	1	1567300	+		21049	14632	10348	10387	24121	24121					0.061674866541807205
LTNLYQVIF	9	Unmodified	_LTNLYQVIF_					0	0	0			REV__sp|F5H8Q3|UL148_HCMVMMembraneproteinUL148OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148PE=3SV=1	REV__sp|F5H8Q3|UL148_HCMVMMembraneproteinUL148OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	555.8320800662041	2	555.813325	1109.6121	0.64204	0.00035685	3.5152	0.0019538	4.1572	0.0023106	555.8153238864803	56.938	0.15041	58.906	58.814	58.964	1.9684					6	4	2	0	0	0	0.063532	1	23863	23863		43.772	5.5968	1	1567300	+		21050	14632	10348	10387	24122	24122					0.061674866541807205
LTNRFKIKLIY	11	Unmodified	_LTNRFKIKLIY_					0	0	0			REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	REV__ENST00000477183.1_1_9:6492313-6492544:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	704.9373657107353	2	704.937379	1407.86021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.686	1	97.942	97.442	98.442	0.25636								0	0	0	0.63775	1	41098	41098		5.2969	2.5617	1		+		21051	13318	10349	10388	24123	24123					0.17259035241841048
LTNSGLISL	9	Unmodified	_LTNSGLISL_					0	0	0		ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	ENSG00000155249|ENST00000641172|OR4K1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1734191775322	2	459.26875	916.522947	1.6469	0.00075636	-0.055671	-2.5568E-05	1.5912	0.00073079	459.26884946427333	55.193	0.31714	56.603	56.476	56.793	1.4099					24	10	3	0	0	0	0.1006	1	23169	23169		10.824	0	1	4421900			21052	3410	10350	10389	24124	24124					0.06134651694674176
LTNTRLFRLRI	11	Unmodified	_LTNTRLFRLRI_					0	0	0			REV__LAMA3|p.L875Rfs*31|1|0.13|ENSG00000053747|chr18:23826753-23826763|CTGCCAGTCAC/-|frameshift_variant	REV__LAMA3|p.L875Rfs*31|1|0.13|ENSG00000053747|chr18:23826753-23826763|CTGCCAGTCAC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	701.9366332888603	2	701.935702	1401.85685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.17	1	102.36	101.86	102.86	0.19076								0	0	0	0.63775	1	42964	42964		5.2969	2.5617	1		+		21053	8629	10351	10390	24125	24125					0.17199785187858652
LTPDRFPEL	9	Unmodified	_LTPDRFPEL_					0	0	0		ENSG00000170605|ENST00000641329|OR9K2;nc|ENSG00000170605|Q8NGE7|OR9K2	ENSG00000170605|ENST00000641329|OR9K2	ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2939941287041	2	544.292756	1086.57096	0.98473	0.00053598	2.7594	0.0015019	3.7441	0.0020379	544.2931009579141	52.191	0.65837	53.587	53.395	54.053	1.3966					45	20	3	0	0	0	0.17276	1	21810	21810		36.127	3.3413	1	1456800			21054	4154	10352	10391	24126	24126					0.031137256147076187
LTPDRFPEL	9	Unmodified	_LTPDRFPEL_					0	0	0		ENSG00000170605|ENST00000641329|OR9K2;nc|ENSG00000170605|Q8NGE7|OR9K2	ENSG00000170605|ENST00000641329|OR9K2	ENSG00000170605|ENST00000641329|OR9K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2949706912041	2	544.292756	1086.57096	0.73837	0.00040189	0.0026427	1.4384E-06	0.74101	0.00040333	544.2927910611081	51.641	0.49765	53.613	53.364	53.862	1.9722					22	15	2	0	0	0	0.17276	1	21594	21594		36.127	3.3413	1	969470			21055	4154	10352	10391	24127	24127					0.031137256147076187
LTPEVSPSHL	10	Unmodified	_LTPEVSPSHL_					0	0	0			REV__ENST00000264852.8_2_3:113346645-113347029:+|nuORF	REV__ENST00000264852.8_2_3:113346645-113347029:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.2913085818291	2	540.290214	1078.56587	1.6986	0.00091772	0.92993	0.00050243	2.6285	0.0014201	540.2909369510187	75.641	0.28457	75.641	75.439	75.723	0					15	8	3	0	0	0	0.85124	1	31499	31499		6.7232	0.96273	1	829850	+		21056	12217	10353	10392	24128	24128					0.029734217520854145
LTPLLLAIQKR	11	Unmodified	_LTPLLLAIQKR_					0	0	0		nc|ENSG00000180777|Q9BXX2-2|ANKRD30B;nc|ENSG00000180777|Q9BXX2|ANKRD30B;ENSG00000180777|ENST00000690538|ANKRD30B	nc|ENSG00000180777|Q9BXX2-2|ANKRD30B	nc|ENSG00000180777|Q9BXX2-2|ANKRD30B	MSMS	GG20161007_CRH_Patient100_W632_01	3	633.4239990115166	2	633.418823	1264.82309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.19	1	107.34	106.84	107.84	0.15781								0	0	0	0.63775	1	46039	46039		1.3295	0.87119	1				21057	4555	10354	10393	24129	24129					0.20127363696042266
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.8047973513603	2	498.803094	995.591636	1.5205	0.00075841	2.0364	0.0010158	3.5569	0.0017742	498.8039758071754	40.441	0.432	40.441	40.266	40.698	0					49	13	4	0	0	0	0.88055	4	16911	16911;16956;16995;17034		8.5933	2.8329	1	18967000			21058	7448	10355	10394	24130;24131;24132;24133	24130					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.8044616580009	2	498.803094	995.591636	1.5369	0.00076661	2.0121	0.0010037	3.549	0.0017703	498.8040451178272	40.846	0.44687	40.846	40.698	41.145	0					43	13	4	0	0	0	0.88663	1	17162	17162		4.756	2.1785	1	9971900			21059	7448	10355	10394	24134	24134					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.8724243044853	3	332.871155	995.591636	1.0884	0.0003623	2.7485	0.0009149	3.8369	0.0012772	332.87240652376335	39.929	0.51965	40.241	39.861	40.381	0.31263					78	16	6	0	0	0	0.88663	1	16704	16704		6.2058	4.5532	1	256120000			21060	7448	10355	10394	24135	24135					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8050109744072	2	498.803094	995.591636	2.2627	0.0011287	1.5511	0.00077371	3.8139	0.0019024	498.80374542426154	39.929	0.61578	40.242	39.892	40.508	0.31263					57	19	4	0	0	0	0.88663	2	16731	16731;16779		4.756	2.1785	1	13361000			21061	7448	10355	10394	24136;24137	24136					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8054382205009	2	498.803094	995.591636	2.2869	0.0011407	1.699	0.00084746	3.9859	0.0019882	498.8039177223351	40.365	0.47231	40.678	40.412	40.884	0.31263					38	14	3	0	0	0	0.88663	2	16899	16899;16951		4.756	2.1785	1	4229900			21062	7448	10355	10394	24138;24139	24138					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8045837283134	2	498.803094	995.591636	1.4597	0.00072808	0.42777	0.00021338	1.8874	0.00094146	498.8032153421018	38.311	0.45489	39.607	39.381	39.836	1.2961					36	14	3	0	0	0	0.88055	3	16120	16018;16067;16120		8.5933	2.8329	1	16513000			21063	7448	10355	10394	24140;24141;24142	24142					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8035461306572	2	498.803094	995.591636	0.60482	0.00030169	1.476	0.00073624	2.0808	0.0010379	498.8035621145939	37.703	0.36124	39.523	39.308	39.67	1.8202					36	11	4	0	0	0	0.88663	2	15794	15794;15833		4.756	2.1785	1	10928000			21064	7448	10355	10394	24143;24144	24143					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8043395876884	2	498.803094	995.591636	0.76078	0.00037948	1.5394	0.00076787	2.3002	0.0011473	498.8038067848277	37.982	0.4593	39.802	39.64	40.099	1.8202					42	14	4	0	0	0	0.88055	1	15882	15882		8.5933	2.8329	1	12390000			21065	7448	10355	10394	24145	24145					0.09366360785031702
LTPRIFHL	8	Unmodified	_LTPRIFHL_					0	0	0		ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	ENST00000585090.1_1_18:3249531-3249615:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	498.803094	995.591636	1.853	0.00092428	0.85334	0.00042565	2.7063	0.0013499	498.80350703189697	38.778	0.3592	40.075	39.805	40.164	1.2961	-0.17797	-0.00075176	NaN	8.5933	31	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7443300			21066	7448	10355	10394							0.09366360785031702
LTPSKVPG	8	Unmodified	_LTPSKVPG_					0	0	0		ENST00000219281.7_1_16:58054964-58055177:+|nuORF	ENST00000219281.7_1_16:58054964-58055177:+|nuORF	ENST00000219281.7_1_16:58054964-58055177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7418395876884	2	399.739628	797.464704	0.12441	4.9732E-05	-1.9592	-0.00078317	-1.8348	-0.00073344	399.73916879368096	67.742	0.684	67.742	67.231	67.915	0					50	21	3	0	0	0	0.88791	1	28129	28129		3.9444	1.6417	1	5696600			21067	5526	10356	10395	24146	24146					0.05787014840052507
LTPYGYEPC	9	Unmodified	_LTPYGYEPC_					0	0	0			REV__ENST00000535423.5_3_12:27149773-27152529:-|nuORF	REV__ENST00000535423.5_3_12:27149773-27152529:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.2949096560478	2	521.731143	1041.44773	3.1246	0.0016302	3.1797	0.0016589	6.3043	0.0032891	521.7323279434894	81.012	0.33771	82.245	82.041	82.378	1.2332					30	10	4	0	0	0	0.11463	1	34028	34028		4.3292	2.0265	1	1925800	+		21068	13745	10357	10396	24147	24147					-0.07133273828071651
LTQAPEEEPI	10	Unmodified	_LTQAPEEEPI_					0	0	0		ENSG00000015413|ENST00000690203|DPEP1	ENSG00000015413|ENST00000690203|DPEP1	ENSG00000015413|ENST00000690203|DPEP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7852661013603	2	563.784961	1125.55537	2.7913	0.0015737	-2.1448	-0.0012092	0.64642	0.00036444	563.7837534786811	50.206	0.28667	51.597	51.451	51.737	1.3911					18	8	3	0	0	0	0.70618	1	21034	21034		18.146	1.2041	1	2141800			21069	598	10358	10397	24148	24148					-0.0023860569301632495
LTQDWTPNL	9	Unmodified	_LTQDWTPNL_					0	0	0			REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2756835818291	2	544.274564	1086.53457	2.3834	0.0012972	-0.24067	-0.00013099	2.1428	0.0011663	544.274445484565	75.583	0.43419	76.889	76.646	77.08	1.3063					40	13	4	0	0	0	0.37357	1	31736	31736		21.747	0	1	7307400	+		21070	8465	10359	10398	24149	24149					-0.005231512820046191
LTQDWTPNL	9	Unmodified	_LTQDWTPNL_					0	0	0			REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	REV__DYSF|p.Y1602Pfs*2|1|0.24|ENSG00000135636|chr2:71660567-71660579|CTTACATCAAGAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2743408083916	2	544.274564	1086.53457	2.7396	0.0014911	-0.88322	-0.00048071	1.8564	0.0010104	544.2741595457899	75.242	0.43546	77.024	76.73	77.166	1.7817					36	13	4	0	0	0	0.37357	1	31492	31492		21.747	0	1	5042800	+		21071	8465	10359	10398	24150	24150					-0.005231512820046191
LTQHLSLLCE	10	Unmodified	_LTQHLSLLCE_					0	0	0		nc|ENSG00000171121|Q9NPA1-4|KCNMB3;ENSG00000171121|ENST00000392685|KCNMB3;nc|ENSG00000171121|Q9NPA1-2|KCNMB3;nc|ENSG00000171121|Q9NPA1|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8074828982353	2	578.805174	1155.59579	2.3368	0.0013525	1.442	0.00083466	3.7788	0.0021872	578.8061339982579	65.685	0.27476	67.083	66.941	67.216	1.3989					16	8	2	0	0	0	0.65659	1	27557	27557		20.415	2.2682	1	1116600			21072	4179	10360	10399	24151	24151					0.024220374257765798
LTQHLSLLCE	10	Unmodified	_LTQHLSLLCE_					0	0	0		nc|ENSG00000171121|Q9NPA1-4|KCNMB3;ENSG00000171121|ENST00000392685|KCNMB3;nc|ENSG00000171121|Q9NPA1-2|KCNMB3;nc|ENSG00000171121|Q9NPA1|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	578.805174	1155.59579	1.7899	0.001036	2.2175	0.0012835	4.0074	0.0023195	578.8064865710935	65.188	0.24943	67.096	66.969	67.218	1.9085	0.006311	0.00051264	NaN	20.415	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1090200			21073	4179	10360	10399							0.024220374257765798
LTQLDTTVI	9	Unmodified	_LTQLDTTVI_					0	0	0			REV__chr1:117143883-117147613|264|35.25|0.37|6.56|-|2|None,VTCN1|1	REV__chr1:117143883-117147613|264|35.25|0.37|6.56|-|2|None,VTCN1|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2895995974541	2	502.28714	1002.55973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.719	1	74.049	73.549	74.549	1.3297								0	0	0	0.05056	1	30521	30521		58.679	4.846	1		+		21074	8205	10361	10400	24152	24152					0.05854903520571497
LTQLHGILS	9	Unmodified	_LTQLHGILS_					0	0	0			REV__ENSG00000138166|ENST00000369583|DUSP5	REV__ENSG00000138166|ENST00000369583|DUSP5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	491.7644531130791	2	491.290017	980.565481	2.2542	0.0011075	1.0462	0.00051399	3.3004	0.0016214	491.289328557055	47.163	0.38182	48.545	48.314	48.695	1.3825					36	11	4	0	0	0	0.065136	1	19755	19755		34.402	0	1	3998800	+		21075	10049	10362	10401	24153	24153					0.07442046822893644
LTQQRELRKK	10	Unmodified	_LTQQRELRKK_					0	0	0		ENST00000463418.5_1_2:158157328-158158798:+|nuORF;ENSG00000136542|ENST00000259056|GALNT5	ENST00000463418.5_1_2:158157328-158158798:+|nuORF	ENST00000463418.5_1_2:158157328-158158798:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3954345583916	2	650.39641	1298.77827	1.7147	0.0011152	-0.87762	-0.0005708	0.83705	0.00054441	650.3956760346166	77.853	0.76601	79.605	79.32	80.086	1.7514					63	24	3	0	0	0	0.89803	1	32586	32586		1.6526	0	1	1890400			21076	2729	10363	10402	24154	24154					0.140829328827067
LTQTDLLEI	9	Unmodified	_LTQTDLLEI_					0	0	0		tr|A0A553SMS7|A0A553SMS7_NIACIAlanyl-transferRNAsynthetasesfamilyprofiledomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23145PE=4SV=1	tr|A0A553SMS7|A0A553SMS7_NIACIAlanyl-transferRNAsynthetasesfamilyprofiledomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23145PE=4SV=1	tr|A0A553SMS7|A0A553SMS7_NIACIAlanyl-transferRNAsynthetasesfamilyprofiledomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.2922241091728	2	523.292422	1044.57029	2.6683	0.0013963	-0.022172	-1.1602E-05	2.6462	0.0013847	523.291830882243	75.24	0.44566	75.565	75.361	75.807	0.32463					28	13	3	0	0	0	0.066815	1	31449	31449		61.357	2.6787	1	5753400			21077	16390	10364	10403	24155	24155					0.04978886175013031
LTQVLSETL	9	Unmodified	_LTQVLSETL_					0	0	0			REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2907287478447	2	502.28714	1002.55973	1.7931	0.00090065	2.4941	0.0012528	4.2872	0.0021534	502.28862954631506	74.202	0.28712	74.202	74.047	74.334	0					14	8	2	0	0	0	0.49082	1	30917	30917		15.847	1.0089	1	478310	+		21078	10859	10365	10404	24156	24156					0.058549035205942346
LTQVLSETL	9	Unmodified	_LTQVLSETL_					0	0	0			REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	502.28714	1002.55973	1.7931	0.00090065	2.4941	0.0012528	4.2872	0.0021534	502.28862954631506	74.202	0.28712	74.202	74.047	74.334	0	0.060532	0.00081241	NaN	15.847	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	478310	+		21079	10859	10365	10404							0.058549035205942346
LTQVLSETL	9	Unmodified	_LTQVLSETL_					0	0	0			REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	502.28714	1002.55973	2.8966	0.0014549	0.90645	0.0004553	3.803	0.0019102	502.2877242421929	73.756	0.25615	74.081	73.945	74.201	0.32494	-0.060532	-0.00078252	NaN	15.847	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467520	+		21080	10859	10365	10404							0.058549035205942346
LTRAAQPFF	9	Unmodified	_LTRAAQPFF_					0	0	0			REV__nc|ENSG00000166317|Q9H987-2|SYNPO2L	REV__nc|ENSG00000166317|Q9H987-2|SYNPO2L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.3862182497978	2	525.790184	1049.56581	4.5137	0.0023732	-0.77235	-0.00040609	3.7413	0.0019671	525.7886482844068	89.566	0.15972	90.971	90.891	91.05	1.4045					6	4	2	0	0	0	0.11333	1	37765	37765		13.508	3.3245	1	288320	+		21081	10820	10366	10405	24157	24157					0.04301466542756316
LTRDKKFQRYL	11	Unmodified	_LTRDKKFQRYL_					0	0	0		ENTPD4|p.S255Rfs*11|1|0.18|ENSG00000197217|chr8:23441688-23441689|-/ACAGCTGAACACAAATGGAGTAATAAAGACG|frameshift_variant;ENTPD4|p.S255Rfs*26|1|0.19|ENSG00000197217|chr8:23441686-23441687|-/AT|frameshift_variant;ENST00000523958.5_1_8:23291828-23307413:-|nuORF;nc|ENSG00000197217|Q9Y227-2|ENTPD4;ENSG00000197217|ENST00000358689|ENTPD4	ENTPD4|p.S255Rfs*11|1|0.18|ENSG00000197217|chr8:23441688-23441689|-/ACAGCTGAACACAAATGGAGTAATAAAGACG|frameshift_variant	ENTPD4|p.S255Rfs*11|1|0.18|ENSG00000197217|chr8:23441688-23441689|-/ACAGCTGAACACAAATGGAGTAATAAAGACG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	367.7172424197197	4	367.716222	1466.83578	-0.051507	-1.894E-05	3.3611	0.0012359	3.3096	0.001217	367.7173385562626	52.428	1.1378	53.825	53.46	54.598	1.3966					70	35	3	0	0	0	1.0365	1	22017	22017		1.2148	0.10508	1	4176000			21082	4988	10367	10406	24158	24158					0.12103775088303337
LTREHIEVEEK	11	Unmodified	_LTREHIEVEEK_					0	0	0		nc|ENSG00000088970|Q2M2Z5-5|KIZ;nc|ENSG00000088970|Q2M2Z5-2|KIZ;ENSG00000088970|ENST00000619189|KIZ;nc|ENSG00000088970|Q2M2Z5-3|KIZ;KIZ|p.S616Rfs*21|1|0.21|ENSG00000088970|chr20:21232797-21232798|-/GC|frameshift_variant;nc|ENSG00000088970|Q2M2Z5-4|KIZ	nc|ENSG00000088970|Q2M2Z5-5|KIZ	nc|ENSG00000088970|Q2M2Z5-5|KIZ	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	691.7862426638603	2	691.867348	1381.72014	3.6502	0.0025254	4.341	0.0030034	7.9912	0.0055288	691.8698078993357	95.448	0.14423	95.869	95.831	95.975	0.4212					5	4	2	0	0	0	0.14606	1	40177	40177		0.77653	0	1	1871700			21083	1113	10368	10407	24159	24159					0.044552064468234676
LTRGTKKEHF	10	Unmodified	_LTRGTKKEHF_					0	0	0		tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8440429568291	2	608.843479	1215.67241	3.2453	0.0019759	-1.3027	-0.00079317	1.9426	0.0011827	608.8432041810146	93.627	0.30698	94.904	94.736	95.043	1.277					16	9	2	0	0	0	0.87699	1	39431	39431		3.9444	0	1	1349100			21084	17338	10369	10408	24160	24160					0.07319597037258063
LTRGTKKEHF	10	Unmodified	_LTRGTKKEHF_					0	0	0		tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	tr|A0A7D7AF07|A0A7D7AF07_9CLOTGlycerolkinaseOS=ClostridiumintestinaleOX=36845GN=glpKPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	608.843479	1215.67241	4.136	0.0025182	-3.3587	-0.0020449	0.77737	0.0004733	608.840774281536	94.191	0.30966	94.932	94.764	95.074	0.74124	0.013825	-0.00095831	NaN	3.9444	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1157600			21085	17338	10369	10408							0.07319597037258063
LTRHHWRI	8	Unmodified	_LTRHHWRI_					0	0	0		nc|ENSG00000130684|Q9Y3M9-2|ZNF337;ENSG00000130684|ENST00000252979|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	nc|ENSG00000130684|Q9Y3M9-2|ZNF337	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8186523318291	2	559.820141	1117.62573	2.5824	0.0014457	-2.6066	-0.0014592	-0.024135	-1.3511E-05	559.8189152357136	91.84	0.51482	92.03	91.852	92.367	0.19042					28	15	3	0	0	0	0.89008	1	38433	38433		2.5775	0.27475	1	1002300			21086	2449	10370	10409	24161	24161					0.07162201996629847
LTRIRQFRLRI	11	Unmodified	_LTRIRQFRLRI_					0	0	0			REV__LAMA2|p.M1615Kfs*2|1|0.37|ENSG00000196569|chr6:129366344-129366345|-/AG|frameshift_variant	REV__LAMA2|p.M1615Kfs*2|1|0.37|ENSG00000196569|chr6:129366344-129366345|-/AG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	736.4701415896416	2	736.470244	1470.92593	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.01	1	117.22	116.72	117.72	0.21096								0	0	0	0.63775	1	50619	50619		1.3295	1.0225	1		+		21087	11639	10371	10410	24162	24162					0.20930869207404612
LTRLALAW	8	Unmodified	_LTRLALAW_					0	0	0		ENST00000487235.5_1_1:153927539-153927596:-|nuORF;ENST00000476883.5_1_1:153925810-153930559:-|nuORF	ENST00000487235.5_1_1:153927539-153927596:-|nuORF	ENST00000487235.5_1_1:153927539-153927596:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2906371951103	2	472.28982	942.565087	2.653	0.001253	-0.46716	-0.00022064	2.1859	0.0010324	472.2895451377392	60.018	0.45121	61.437	61.146	61.597	1.4196					51	14	5	0	0	0	0.38673	1	25226	25226		56.541	16.093	1	41920000			21088	6788	10372	10411	24163	24163					0.09150671893689832
LTRLLALSRP	10	Unmodified	_LTRLLALSRP_					0	0	0			REV__ENSG00000180739|ENST00000333430|S1PR5	REV__ENSG00000180739|ENST00000333430|S1PR5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	380.8871642947197	3	380.580152	1138.71863	1.6273	0.0006193	3.2936	0.0012535	4.9209	0.0018728	380.5810909762923	51.806	0.24208	52.132	52.006	52.248	0.32554					9	7	2	0	0	0	0.12541	1	21727	21727		5.4027	0	1	559120	+		21089	11302	10373	10412	24164	24164					0.15481661939361402
LTRPYRRRYLE	11	Unmodified	_LTRPYRRRYLE_					0	0	0			REV__nc|ENSG00000078043|O75928-3|PIAS2	REV__nc|ENSG00000078043|O75928-3|PIAS2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	507.7701599001884	3	508.291553	1521.85283	2.2332	0.0011351	-1.0967	-0.00055743	1.1365	0.00057768	508.2916219147985	48.135	0.66407	48.135	47.683	48.347	0					27	20	2	0	0	0	0.14606	1	19993	19993		1.3296	0	1	402290	+		21090	8784	10374	10413	24165	24165					0.11277695694116119
LTRRLSLLFFL	11	Unmodified	_LTRRLSLLFFL_					0	0	0		ENST00000427230.2_1_7:29252007-29252112:+|nuORF	ENST00000427230.2_1_7:29252007-29252112:+|nuORF	ENST00000427230.2_1_7:29252007-29252112:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	689.9340698122978	2	689.932097	1377.84964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.919	1	98.176	97.676	98.676	0.25636								0	0	0	0.63775	1	41197	41197		2.7352	1.2533	1				21091	6474	10375	10414	24166	24166					0.175830525874062
LTRTTFPVS	9	Unmodified	_LTRTTFPVS_					0	0	0			REV__nc|ENSG00000019186|Q07973-3|CYP24A1	REV__nc|ENSG00000019186|Q07973-3|CYP24A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1960632205009	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.858	1	91.067	90.567	91.567	0.20904								0	0	0	0.42693	1	38067	38067		1.0715	0.10919	1		+		21092	8552	10376	10415	24167	24167					0.05093742960286818
LTRVQAVDPD	10	Unmodified	_LTRVQAVDPD_					0	0	0		FAT3|p.F3345Lfs*103|1|0.08|ENSG00000165323|chr11:92840677-92840678|-/AGTTGCCAGGATGTCCCCCCAAAAAA|frameshift_variant;FAT3|p.L3490Wfs*79|1|0.04|ENSG00000165323|chr11:92844285-92844285|T/-|frameshift_variant;FAT3|p.F3624Pfs*89|1|0.54|ENSG00000165323|chr11:92844685-92844686|-/CC|frameshift_variant;FAT3|p.V3625Sfs*97|1|0.52|ENSG00000165323|chr11:92844687-92844688|-/TCTCCATGAATTTTACATTCCAGCATCTC|frameshift_variant;nc|ENSG00000165323|Q8TDW7|FAT3;ENSG00000165323|ENST00000525166|FAT3	FAT3|p.F3345Lfs*103|1|0.08|ENSG00000165323|chr11:92840677-92840678|-/AGTTGCCAGGATGTCCCCCCAAAAAA|frameshift_variant	FAT3|p.F3345Lfs*103|1|0.08|ENSG00000165323|chr11:92840677-92840678|-/AGTTGCCAGGATGTCCCCCCAAAAAA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1013976931572	3	371.868139	1112.58259	-0.47997	-0.00017849	0.66732	0.00024815	0.18735	6.967E-05	372.2022612040689	75.607	0.31728	75.607	75.406	75.723	0					10	9	2	0	0	0	0.12558	1	31426	31426		0.50596	0	1	390900			21093	3831	10377	10416	24168	24168					0.030799226380622713
LTSIENFTALF	11	Unmodified	_LTSIENFTALF_					0	0	0			REV__ENSG00000186119|ENST00000333976|OR5D18	REV__ENSG00000186119|ENST00000333976|OR5D18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	628.3842040896416	2	628.332079	1254.6496	2.3531	0.0014785	1.1671	0.0007333	3.5201	0.0022118	628.3329130485065	78.35	0.30585	79.617	79.481	79.787	1.2668					15	9	2	0	0	0	0.14606	1	32868	32868		2.4985	0	1	644360	+		21094	11490	10378	10417	24169	24169					0.03246533129117779
LTSIENFTALF	11	Unmodified	_LTSIENFTALF_					0	0	0			REV__ENSG00000186119|ENST00000333976|OR5D18	REV__ENSG00000186119|ENST00000333976|OR5D18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	628.3822509646416	2	628.332079	1254.6496	1.0114	0.00063549	0.67367	0.00042329	1.6851	0.0010588	628.3320531815771	77.781	0.24909	79.532	79.467	79.716	1.7514					12	7	2	0	0	0	0.14479	1	32612	32612		4.897	0	1	948510	+		21095	11490	10378	10417	24170	24170					0.03246533129117779
LTSIKDIPKQL	11	Unmodified	_LTSIKDIPKQL_					0	0	0			REV__tr|A0A553SM08|A0A553SM08_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21670PE=4SV=1	REV__tr|A0A553SM08|A0A553SM08_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_21670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3810302615166	2	628.384645	1254.75474	1.2793	0.0008039	-2.5892	-0.001627	-1.3099	-0.00082313	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.98155	1	32561	32561		4.897	1.3005	1	6175000	+		21096	15002	10379	10418	24171	24171					0.13755074325536043
LTSLGVNINI	10	Unmodified	_LTSLGVNINI_					0	0	0		tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3112670779228	2	522.308406	1042.60226	1.7962	0.00093819	-0.50987	-0.00026631	1.2864	0.00067188	522.3072775712274	64.816	0.53121	66.744	66.551	67.082	1.928					23	16	2	0	0	0	0.77604	1	27205	27205		14.838	0	1	1047200			21097	16754	10380	10419	24172	24172					0.0826629864880033
LTSLGVNINI	10	Unmodified	_LTSLGVNINI_					0	0	0		tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	522.308406	1042.60226	1.9361	0.0010112	2.1699	0.0011333	4.106	0.0021446	522.3096061953794	66.878	0.19041	66.878	66.767	66.957	0	0.10357	0.0002505	NaN	14.838	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	470350			21098	16754	10380	10419							0.0826629864880033
LTSLGVNINI	10	Unmodified	_LTSLGVNINI_					0	0	0		tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	tr|A0A7D6VP43|A0A7D6VP43_9CLOTAnthranilatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=trpDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	522.308406	1042.60226	3.0946	0.0016164	4.0689	0.0021252	7.1635	0.0037416	522.3106969838587	65.249	0.27956	66.648	66.508	66.788	1.3989	-0.12626	0.0022343	NaN	14.838	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1041500			21099	16754	10380	10419							0.0826629864880033
LTSLQCQFAF	10	Unmodified	_LTSLQCQFAF_					0	0	0			REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF	REV__ENST00000316660.6_1_18:57570359-57570470:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.2917358279228	2	579.286617	1156.55868	2.2058	0.0012778	2.0174	0.0011686	4.2232	0.0024464	579.2873267141607	78.414	0.43512	80.149	79.915	80.35	1.735					19	13	2	0	0	0	0.79268	1	32951	32951		13.042	0	1	937830	+		21100	12391	10381	10420	24173	24173					-0.013336341199874369
LTSLRKLWLMH	11	Unmodified	_LTSLRKLWLMH_					0	0	0		ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	ENSG00000131409|ENST00000652263|LRRC4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4103271365166	2	699.407932	1396.80131	2.6858	0.0018785	1.4306	0.0010006	4.1164	0.0028791	699.4090452404861	85.115	1.1414	85.115	84.461	85.603	0					72	35	3	0	0	0	1.039	1	35450	35450		1.3295	0.92882	1	1363000			21101	2491	10382	10421	24174	24174					0.11878235675862925
LTSLYLRKMP	10	Unmodified	_LTSLYLRKMP_					0	0	0		LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant;ENSG00000125872|ENST00000378858|LRRN4	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3569213747978	2	611.354834	1220.69511	2.1411	0.001309	2.3067	0.0014102	4.4478	0.0027192	611.3559752604883	77.193	1.4644	77.193	76.284	77.749	0					117	46	3	0	0	0	0.89803	3	32122	32122;32173;32230		1.4819	0.8804	1	2596800			21102	2287	10383	10422	24175;24176;24177	24175					0.09359480110538243
LTSLYLRKMP	10	Unmodified	_LTSLYLRKMP_					0	0	0		LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant;ENSG00000125872|ENST00000378858|LRRN4	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3571044802666	2	611.354834	1220.69511	2.1011	0.0012845	1.9376	0.0011846	4.0387	0.0024691	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	0.89803	2	32963	32963;33216		1.4819	0.28856	1	6519600			21103	2287	10383	10422	24178;24179	24178					0.09359480110538243
LTSLYLRKMP	10	Unmodified	_LTSLYLRKMP_					0	0	0		LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant;ENSG00000125872|ENST00000378858|LRRN4	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3576537966728	2	611.354834	1220.69511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.006	1	80.006	79.506	80.506	0								0	0	0	0.66176	1	33315	33315		1.4819	0	1				21104	2287	10383	10422	24180	24180					0.09359480110538243
LTSLYLRKMP	10	Unmodified	_LTSLYLRKMP_					0	0	0		LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant;ENSG00000125872|ENST00000378858|LRRN4	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	LRRN4|p.T324Nfs*97|1|0.13|ENSG00000125872|chr20:6044570-6044571|-/GTGCTTCTCTTTGGAGGGAATGTGGGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3577758669853	2	611.354834	1220.69511	1.9698	0.0012043	3.2056	0.0019597	5.1754	0.003164	611.3566402316326	77.022	2.1695	77.338	76.479	78.648	0.31653					134	68	3	0	0	0	0.89803	1	32180	32180		1.4819	0.8804	1	3044900			21105	2287	10383	10422	24181	24181					0.09359480110538243
LTSPIRPNLL	10	Unmodified	_LTSPIRPNLL_					0	0	0			REV__ENST00000511355.5_1_17:49239541-49239703:+|nuORF	REV__ENST00000511355.5_1_17:49239541-49239703:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3436767458916	2	562.345323	1122.67609	1.2783	0.00071885	-2.6286	-0.0014782	-1.3503	-0.00075932	562.3438163433274	71.225	0.89718	73.049	72.547	73.445	1.824					52	28	3	0	0	0	0.846	1	29822	29822		7.2892	0	1	5197600	+		21106	13573	10384	10423	24182	24182					0.11966266811123205
LTSRFKKFIHF	11	Unmodified	_LTSRFKKFIHF_					0	0	0		tr|A0A553SMY0|A0A553SMY0_NIACIAAAfamilyATPaseOS=NialliacirculansOX=1397GN=CEQ21_23385PE=3SV=1	tr|A0A553SMY0|A0A553SMY0_NIACIAAAfamilyATPaseOS=NialliacirculansOX=1397GN=CEQ21_23385PE=3SV=1	tr|A0A553SMY0|A0A553SMY0_NIACIAAAfamilyATPaseOS=NialliacirculansOX=1397GN=CEQ21_23385PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7111694216728	4	356.710674	1422.81359	-0.81592	-0.00029105	1.7961	0.00064067	0.98013	0.00034962	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	1.0365	1	22010	22010		1.2148	0.36989	1	19031000			21107	16399	10385	10424	24183	24183					0.11909595410565998
LTTGGATIL	9	Unmodified	_LTTGGATIL_					0	0	0			REV__nc|ENSG00000172845|Q02447-6|SP3	REV__nc|ENSG00000172845|Q02447-6|SP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	846.4945556521416	1	846.49311	845.485833	1.8931	0.0016025	-0.0078618	-6.6549E-06	1.8852	0.0015958	846.493279250402	49.573	0.36963	50.964	50.765	51.135	1.3911					21	11	2	0	0	0	0.069258	1	20773	20773		60.39	2.9182	1	2014400	+		21108	11075	10386	10425	24184	24184					0.056909801489041456
LTTKRFLEL	9	Unmodified	_LTTKRFLEL_					0	0	0		ENSG00000101412|ENST00000343380|E2F1	ENSG00000101412|ENST00000343380|E2F1	ENSG00000101412|ENST00000343380|E2F1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8408080935478	2	560.839874	1119.66519	0.73612	0.00041285	1.3263	0.00074386	2.0625	0.0011567	560.840710633104	37.217	0.40815	39.037	38.9	39.308	1.8202					27	16	2	0	0	0	0.25667	1	15611	15611		27.629	2.2295	1	723510			21109	1346	10387	10426	24185	24185					0.11014864436833705
LTTTTKSTL	9	Unmodified	_LTTTTKSTL_					0	0	0			REV__NLRP1|p.M686Rfs*73|1|0.05|ENSG00000091592|chr17:5558638-5558639|CA/-|frameshift_variant	REV__NLRP1|p.M686Rfs*73|1|0.05|ENSG00000091592|chr17:5558638-5558639|CA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2789794802666	2	483.279315	964.544076	1.1348	0.00054843	-1.5033	-0.00072651	-0.3685	-0.00017809	483.27872040161424	77.566	0.42279	79.317	79.136	79.559	1.7514					32	13	3	0	0	0	0.59203	1	32571	32571		11.64	0	1	4103600	+		21110	8905	10388	10427	24186	24186					0.060386170035258147
LTTTTKSTL	9	Unmodified	_LTTTTKSTL_					0	0	0			REV__NLRP1|p.M686Rfs*73|1|0.05|ENSG00000091592|chr17:5558638-5558639|CA/-|frameshift_variant	REV__NLRP1|p.M686Rfs*73|1|0.05|ENSG00000091592|chr17:5558638-5558639|CA/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	483.279315	964.544076	1.1348	0.00054843	-1.5033	-0.00072651	-0.3685	-0.00017809	483.27872040161424	77.566	0.42279	79.317	79.136	79.559	1.7514	0.16392	0.00082629	NaN	11.64	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4103600	+		21111	8905	10388	10427							0.060386170035258147
LTTYKKIEEEV	11	Unmodified	_LTTYKKIEEEV_					0	0	0			REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K;REV__ENSG00000138756|ENST00000502613|BMP2K	REV__nc|ENSG00000138756|Q9NSY1-2|BMP2K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	676.8741943240166	2	676.869025	1351.7235	2.873	0.0019446	2.6841	0.0018168	5.5571	0.0037614	676.8698917447596	92.17	0.38985	93.497	93.244	93.634	1.3269					26	11	3	0	0	0	0.83203	1	38758	38758		13.906	0.86358	1	2459400	+		21112	14444;10077	10389	10428	24187	24187					0.06170456500808541
LTVAAEPLPP	10	Unmodified	_LTVAAEPLPP_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2922241091728	2	504.292225	1006.5699	1.2032	0.00060676	1.711	0.00086285	2.9142	0.0014696	504.2922524380645	77.67	0.45478	79.422	79.167	79.622	1.7514					24	14	2	0	0	0	0.57775	1	32559	32559		24.021	3.1494	1	5604500	+		21113	9781	10390	10429	24188	24188					0.06687511245786482
LTVAAEPLPP	10	Unmodified	_LTVAAEPLPP_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	504.292225	1006.5699	1.8644	0.00094022	4.032	0.0020333	5.8965	0.0029735	504.29427764201455	79.732	0.27737	79.732	79.609	79.887	0	0.22695	0.0014267	NaN	24.021	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1421700	+		21114	9781	10390	10429							0.06687511245786482
LTVAAEPLPP	10	Unmodified	_LTVAAEPLPP_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	504.292225	1006.5699	2.1494	0.0010839	2.0001	0.0010086	4.1495	0.0020925	504.2925563598948	79.118	0.28004	79.418	79.31	79.59	0.30047	-0.087044	-0.00062265	NaN	24.021	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1469600	+		21115	9781	10390	10429							0.06687511245786482
LTVAAEPLPP	10	Unmodified	_LTVAAEPLPP_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.292225	1006.5699	2.763	0.0013933	1.4559	0.0007342	4.2189	0.0021275	504.2922489111773	78.167	0.47989	79.448	79.229	79.709	1.2809	-0.056745	-0.0011715	NaN	24.021	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4589400	+		21116	9781	10390	10429							0.06687511245786482
LTVAAEPLPP	10	Unmodified	_LTVAAEPLPP_					0	0	0			REV__ENSG00000130338|ENST00000367097|TULP4	REV__ENSG00000130338|ENST00000367097|TULP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	504.292225	1006.5699	1.2032	0.00060676	1.711	0.00086285	2.9142	0.0014696	504.2922524380645	77.67	0.45478	79.422	79.167	79.622	1.7514	-0.083163	-0.0009142	NaN	24.021	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5604500	+		21117	9781	10390	10429							0.06687511245786482
LTVADKGAPN	10	Unmodified	_LTVADKGAPN_					0	0	0			REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2691833376884	2	493.269281	984.52401	1.6504	0.00081408	-3.8094	-0.0018791	-2.159	-0.001065	493.2672559483115	80.838	0.46736	80.838	80.572	81.04	0					21	14	2	0	0	0	0.85604	1	33658	33658		6.2058	0	1	1486000	+		21118	11420	10391	10430	24189	24189					0.03112866063565889
LTVADKGAPN	10	Unmodified	_LTVADKGAPN_					0	0	0			REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	REV__nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	493.269281	984.52401	1.6504	0.00081408	-3.8094	-0.0018791	-2.159	-0.001065	493.2672559483115	80.838	0.46736	80.838	80.572	81.04	0	0	0	NaN	6.2058	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1486000	+		21119	11420	10391	10430							0.03112866063565889
LTVFWMDFV	9	Unmodified	_LTVFWMDFV_					0	0	0		ENST00000330374.6_1_X:150577718-150577775:+|nuORF	ENST00000330374.6_1_X:150577718-150577775:+|nuORF	ENST00000330374.6_1_X:150577718-150577775:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.2911254763603	2	579.288628	1156.5627	1.7092	0.00099012	0.19169	0.00011105	1.9009	0.0011012	579.2881208339445	79.834	0.31604	80.135	79.942	80.258	0.30046					16	9	3	0	0	0	0.49082	1	33353	33353		15.847	1.9411	1	409120			21120	5887	10392	10431	24190	24190					-0.009315446262917249
LTVGFWVAL	9	Unmodified	_LTVGFWVAL_					0	0	0			REV__tr|A0A553STM8|A0A553STM8_NIACIDUF4064domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05400PE=4SV=1	REV__tr|A0A553STM8|A0A553STM8_NIACIDUF4064domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05400PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.2932922244072	2	503.292028	1004.5695	2.9441	0.0014818	-0.1767	-8.8931E-05	2.7674	0.0013928	503.29205415833263	75.373	0.4105	75.697	75.458	75.868	0.32464					19	12	2	0	0	0	0.66839	1	31528	31528		8.5933	0	1	1475400	+		21121	15248	10393	10432	24191	24191					0.06740136316591361
LTVIFASGQV	10	Unmodified	_LTVIFASGQV_					0	0	0			REV__tr|A0A7D6VQV1|A0A7D6VQV1_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23725PE=4SV=1	REV__tr|A0A7D6VQV1|A0A7D6VQV1_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_23725PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1034.588916003704	1	1034.58807	1033.5808	4.0026	0.004141	-0.66195	-0.00068485	3.3406	0.0034562	1034.5895005483487	97.06	0.11964	97.366	97.289	97.409	0.3062					5	3	2	0	0	0	0.55653	1	40843	40843		24.991	0.97039	1	20505000	+		21122	15392	10394	10433	24192	24192					0.06534913620089355
LTVLLLWLKN	10	Unmodified	_LTVLLLWLKN_					0	0	0			REV__ENST00000477085.1_1_X:107512310-107682601:-|nuORF	REV__ENST00000477085.1_1_X:107512310-107682601:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483398318291	4	303.948322	1211.76418	0.33533	0.00010192	-0.53898	-0.00016382	-0.20365	-6.1899E-05	303.9482681573334	52.704	0.51714	54.677	54.385	54.902	1.9722					28	20	2	0	0	0	0.12561	1	22038	22038		0.15932	0	1	2715400	+		21123	13317	10395	10434	24193	24193					0.16676887401740714
LTVPSGLFLL	10	Unmodified	_LTVPSGLFLL_					0	0	0			REV__ENST00000485387.1_1_7:100865814-100867236:+|nuORF	REV__ENST00000485387.1_1_7:100865814-100867236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3267089724541	2	530.326068	1058.63758	1.9864	0.0010534	0.31969	0.00016954	2.3061	0.001223	530.3259575627627	65.42	0.71096	67.328	66.938	67.649	1.9085					49	22	3	0	0	0	0.17319	2	27460	27460;27529		52.268	14.294	1	2330900	+		21124	13389	10396	10435	24194;24195	24194					0.11060961176622186
LTVSLARPW	9	Unmodified	_LTVSLARPW_					0	0	0			REV__ENST00000322428.9_1_8:145162330-145162495:+|nuORF	REV__ENST00000322428.9_1_8:145162330-145162495:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2071105837822	3	348.206315	1041.59712	0.8385	0.00029197	0.81089	0.00028236	1.6494	0.00057433	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.82654	1	13291	13291		2.2828	0	1	7322900	+		21125	12413	10397	10436	24196	24196					0.0779803957684635
LTVTLNLN	8	Unmodified	_LTVTLNLN_					0	0	0			REV__ENSG00000232040|ENST00000452236|SCAND3	REV__ENSG00000232040|ENST00000452236|SCAND3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	444.2632934451103	2	444.263468	886.512382	3.372	0.001498	-1.9378	-0.00086089	1.4342	0.00063716	444.26321218095234	107.62	0.16583	107.77	107.68	107.84	0.15781					18	8	3	0	0	0	0.89008	1	46327	46327		2.5775	0	1	41162000	+		21126	11899	10398	10437	24197	24197					0.0645866904022796
LTVWAPLL	8	Unmodified	_LTVWAPLL_					0	0	0		nc|ENSG00000006118|Q24JP5-4|TMEM132A;ENSG00000006118|ENST00000453848|TMEM132A;nc|ENSG00000006118|Q24JP5-2|TMEM132A	nc|ENSG00000006118|Q24JP5-4|TMEM132A	nc|ENSG00000006118|Q24JP5-4|TMEM132A	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7827026247978	2	456.781296	911.54804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.929	1	92.865	92.365	93.365	0.93623								0	0	0	1.0178	1	38719	38719		34.187	6.0141	1				21127	502	10399	10438	24198	24198					0.08872751287890424
LTWTRKWFWLL	11	Unmodified	_LTWTRKWFWLL_					0	0	0			REV__ENST00000396420.7_1_1:46658257-46658620:-|nuORF	REV__ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2892944216728	3	517.294123	1548.86054	2.0636	0.0010675	-3.6064	-0.0018656	-1.5428	-0.00079809	517.2915899410583	43.161	3.6025	43.161	42.88	46.482	0					255	114	3	0	0	0	1.0357	1	17975	17975		1.4551	0.94916	1	9258100	+		21128	12847	10400	10439	24199	24199					0.10806454961698364
LTWTRKWFWLL	11	Unmodified	_LTWTRKWFWLL_					0	0	0			REV__ENST00000396420.7_1_1:46658257-46658620:-|nuORF	REV__ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.7946655154228	3	517.294123	1548.86054	2.0666	0.001069	-2.4428	-0.0012636	-0.3762	-0.00019461	517.2944268819845	83.312	0.9324	84.95	84.542	85.475	1.6379					57	29	4	0	0	0	0.14606	1	34944	34944		0.45452	0.12525	1	2686000	+		21129	12847	10400	10439	24200	24200					0.10806454961698364
LTYAISISTL	10	Unmodified	_LTYAISISTL_					0	0	0		ENST00000494345.5_1_12:56869710-56882067:-|nuORF;ENSG00000135423|ENST00000311966|GLS2	ENST00000494345.5_1_12:56869710-56882067:-|nuORF	ENST00000494345.5_1_12:56869710-56882067:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.3135864138603	2	541.310615	1080.60668	2.0923	0.0011326	1.9509	0.001056	4.0432	0.0021886	541.3117620302062	80.653	0.36694	82.349	82.18	82.547	1.6959					20	11	3	0	0	0	0.41677	1	33870	33870		32.305	5.4218	1	4244800			21130	2663	10401	10440	24201	24201					0.06959763071722591
LTYFKDQI	8	Unmodified	_LTYFKDQI_					0	0	0		tr|A0A553SQB9|A0A553SQB9_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26305PE=4SV=1	tr|A0A553SQB9|A0A553SQB9_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26305PE=4SV=1	tr|A0A553SQB9|A0A553SQB9_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26305PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.7787963747978	2	514.276575	1026.5386	2.557	0.001315	-3.4682	-0.0017836	-0.91116	-0.00046859	514.2746781632464	67.963	0.18279	69.833	69.704	69.887	1.87					7	5	2	0	0	0	2.3239	1	28500	28500		4.756	0.42677	1	1199100			21131	16510	10402	10441	24202	24202					0.026389382117031346
LTYSLHVIIRY	11	Unmodified	_LTYSLHVIIRY_					0	0	0		tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	689.5228759646416	2	689.398087	1376.78162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.52	1	112.67	112.17	113.17	0.14912								0	0	0	0.63775	1	48744	48744		2.9952	0	1				21132	17078	10403	10442	24203	24203					0.10830182936751953
LVAAGLRPGE	10	Unmodified	_LVAAGLRPGE_					0	0	0			REV__nc|ENSG00000266714|Q96JP2-2|MYO15B	REV__nc|ENSG00000266714|Q96JP2-2|MYO15B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5662719607353	1	982.568006	981.56073	3.7876	0.0037216	-1.6581	-0.0016292	2.1295	0.0020924	982.5687435438141	80.905	1.2538	82.139	81.742	82.996	1.2332					58	40	2	0	0	0	0.70643	1	33979	33979		18.135	3.5533	1	2222100	+		21133	11997	10404	10443	24204	24204					0.06921162680134785
LVAANKAVHL	10	Unmodified	_LVAANKAVHL_					0	0	0		TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant;nc|ENSG00000144034|Q9Y3C4-2|TPRKB;ENST00000489476.5_1_2:73956300-73964431:-|nuORF;ENST00000470012.1_1_2:73959253-73964442:-|nuORF;ENST00000497464.5_1_2:73957656-73964442:-|nuORF;ENST00000463231.5_1_2:73956300-73964442:-|nuORF;ENSG00000144034|ENST00000272424|TPRKB;nc|ENSG00000144034|Q9Y3C4-3|TPRKB	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	TPRKB|p.M70Nfs*9|1|0.23|ENSG00000144034|chr2:73732218-73732219|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.3182861208916	2	518.319109	1034.62366	2.4402	0.0012648	-2.0634	-0.0010695	0.37684	0.00019532	518.317196125843	82.915	0.49106	82.915	82.677	83.168	0					49	15	4	0	0	0	0.80568	1	34546	34546		11.64	2.2929	1	11342000			21134	3063	10405	10444	24205	24205					0.10773728468188892
LVAAPVGPK	9	Unmodified	_LVAAPVGPK_					0	0	0			REV__tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	REV__tr|A0A553SR72|A0A553SR72_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_00545PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	426.2729980349541	2	426.271096	850.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.529	1	60.498	59.998	60.998	1.969								0	0	0	0.42693	1	24552	24552		2.0598	1.3694	1		+		21135	15147	10406	10445	24206	24206					0.09639580628095246
LVAARSVPRRG	11	Unmodified	_LVAARSVPRRG_					0	0	0		ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	591.3654662966728	2	591.364913	1180.71527	1.7189	0.0010165	0.80009	0.00047315	2.519	0.0014896	591.3651939141374	97.003	0.15546	97.003	96.894	97.049	0					8	4	2	0	0	0	1.0362	1	40560	40560		1.3295	0	1	1740300			21136	6427	10407	10446	24207	24207					0.13214411885360278
LVAARSVPRRG	11	Unmodified	_LVAARSVPRRG_					0	0	0		ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	591.364913	1180.71527	2.614	0.0015458	1.2643	0.00074764	3.8782	0.0022935	591.3660604416044	96.917	0.19261	97.022	96.878	97.07	0.105	0.090226	6.552E-05	NaN	1.3295	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2527900			21137	6427	10407	10446							0.13214411885360278
LVAARSVPRRG	11	Unmodified	_LVAARSVPRRG_					0	0	0		ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	ENST00000418460.2_1_1:232941107-232941410:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	591.364913	1180.71527	3.2933	0.0019475	1.2938	0.00076512	4.5871	0.0027127	591.3661483219072	96.463	0.18811	96.77	96.694	96.882	0.3062	-0.16198	0.00010049	NaN	1.3295	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	428090			21138	6427	10407	10446							0.13214411885360278
LVAASQAALGL	11	Unmodified	_LVAASQAALGL_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3051330447197	2	507.303124	1012.5917	2.1429	0.0010871	0.56162	0.00028491	2.7045	0.001372	507.3035401899123	53.813	0.22617	53.813	53.679	53.905	0					9	6	2	0	0	0	0.83203	1	22436	22436		13.906	0	1	341320		+	21139	340	10408	10447	24208	24208					0.08590315994376851
LVACRLVFPQ	10	Unmodified	_LVACRLVFPQ_					0	0	0			REV__USO1|p.L895Hfs*10|1|0.25|ENSG00000138768|chr4:75812257-75812258|-/GCAT|frameshift_variant	REV__USO1|p.L895Hfs*10|1|0.25|ENSG00000138768|chr4:75812257-75812258|-/GCAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3301269412041	2	573.328619	1144.64269	2.6797	0.0015363	-1.5648	-0.00089716	1.1149	0.00063918	573.32775594367	50.206	0.32011	51.597	51.355	51.675	1.3911					13	9	2	0	0	0	0.65574	1	21012	21012		20.454	2.3073	1	1001500	+		21140	10080	10409	10448	24209	24209					0.0761494176758788
LVAIEGVRI	9	Unmodified	_LVAIEGVRI_					0	0	0			REV__nc|ENSG00000226098|P0C7V7|SEC11B	REV__nc|ENSG00000226098|P0C7V7|SEC11B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3077575564384	2	485.30821	968.601866	-0.33396	-0.00016207	-0.82313	-0.00039947	-1.1571	-0.00056154	485.3076958137449	51.061	0.58148	53.037	52.757	53.339	1.9753					46	22	3	0	0	0	0.54523	1	21464	21464		13.508	0.97634	1	24487000	+		21141	14543	10410	10449	24210	24210					0.11630923719621933
LVAKIRRIA	9	Unmodified	_LVAKIRRIA_					0	0	0			REV__tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	REV__tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2434265017509	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.564	1	83.26	82.76	83.76	1.6959								0	0	0	0.42693	1	34220	34220		0.26902	0	1		+		21142	15480	10411	10450	24211	24211					0.18478000493155378
LVALDVGPA	9	Unmodified	_LVALDVGPA_					0	0	0			REV__ENSG00000173908|ENST00000306658|KRT28	REV__ENSG00000173908|ENST00000306658|KRT28	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.7538940310478	2	427.752736	853.490919	2.5285	0.0010816	2.1928	0.00093799	4.7213	0.0020196	427.7534552910429	77.898	0.51891	79.179	78.888	79.407	1.2809					30	16	3	0	0	0	0.77526	1	32702	32702		4.3292	0	1	2037000	+	+	21143	8394	10412	10451	24212	24212					0.0583128401152635
LVALDVGPA	9	Unmodified	_LVALDVGPA_					0	0	0			REV__ENSG00000173908|ENST00000306658|KRT28	REV__ENSG00000173908|ENST00000306658|KRT28	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	427.752736	853.490919	1.0045	0.00042969	3.9541	0.0016914	4.9587	0.0021211	427.7542847355188	79.314	0.49107	79.314	79.085	79.576	0	-0.020913	0.00049355	NaN	4.3292	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3038300	+	+	21144	8394	10412	10451							0.0583128401152635
LVALDVGPA	9	Unmodified	_LVALDVGPA_					0	0	0			REV__ENSG00000173908|ENST00000306658|KRT28	REV__ENSG00000173908|ENST00000306658|KRT28	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	427.752736	853.490919	2.0773	0.00088857	3.7528	0.0016053	5.8302	0.0024939	427.7540138009969	79.211	0.65945	79.512	79.217	79.877	0.30047	0.17675	0.00032134	NaN	4.3292	40	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2643700	+	+	21145	8394	10412	10451							0.0583128401152635
LVALDVGPA	9	Unmodified	_LVALDVGPA_					0	0	0			REV__ENSG00000173908|ENST00000306658|KRT28	REV__ENSG00000173908|ENST00000306658|KRT28	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	427.752736	853.490919	2.5285	0.0010816	2.1928	0.00093799	4.7213	0.0020196	427.7534552910429	77.898	0.51891	79.179	78.888	79.407	1.2809	-0.15584	-0.0010133	NaN	4.3292	30	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2037000	+	+	21146	8394	10412	10451							0.0583128401152635
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.8307983279228	2	497.829643	993.644734	0.75539	0.00037605	0.6851	0.00034106	1.4405	0.00071712	497.8299023087191	23.582	0.24313	23.582	23.475	23.718	0					12	7	2	0	0	0	0.5697	1	9841	9841		12.532	0	1	778540	+		21147	9101	10413	10452	24213	24213					0.14765738567700737
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8298217654228	2	497.829643	993.644734	1.1063	0.00055076	1.1816	0.00058825	2.2879	0.001139	497.8303072959488	22.379	0.19135	23.556	23.444	23.635	1.177					12	5	3	0	0	0	0.66839	1	9358	9358		8.5933	0	1	712140	+		21148	9101	10413	10452	24214	24214					0.14765738567700737
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8301574587822	2	497.829643	993.644734	0.38564	0.00019198	0.72722	0.00036203	1.1129	0.00055402	497.8300982026637	21.917	0.23994	23.532	23.401	23.641	1.6158					12	7	2	0	0	0	0.66839	1	9142	9142		8.5933	0	1	793850	+		21149	9101	10413	10452	24215	24215					0.14765738567700737
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	497.829643	993.644734	0.75539	0.00037605	0.6851	0.00034106	1.4405	0.00071712	497.8299023087191	23.582	0.24313	23.582	23.475	23.718	0	-0.0099145	9.3852E-05	NaN	12.532	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	778540	+		21150	9101	10413	10452							0.14765738567700737
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.829643	993.644734	1.1063	0.00055076	1.1816	0.00058825	2.2879	0.001139	497.8303072959488	22.379	0.19135	23.556	23.444	23.635	1.177	-0.035663	0.00058822	NaN	12.532	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712140	+		21151	9101	10413	10452							0.14765738567700737
LVALGPRLR	9	Unmodified	_LVALGPRLR_					0	0	0			REV__ENSG00000103253|ENST00000389703|HAGHL	REV__ENSG00000103253|ENST00000389703|HAGHL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.829643	993.644734	0.38564	0.00019198	0.72722	0.00036203	1.1129	0.00055402	497.8300982026637	21.917	0.23994	23.532	23.401	23.641	1.6158	-0.058982	0.0001358	NaN	12.532	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793850	+		21152	9101	10413	10452							0.14765738567700737
LVALIHMVKK	10	Unmodified	_LVALIHMVKK_					0	0	0		ENST00000494880.5_1_1:185269193-185269247:-|nuORF	ENST00000494880.5_1_1:185269193-185269247:-|nuORF	ENST00000494880.5_1_1:185269193-185269247:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1534911990166	3	384.582617	1150.72602	-0.84347	-0.00032438	0.56027	0.00021547	-0.2832	-0.00010891	384.5826997862565	26.673	0.71463	26.673	26.269	26.983	0					82	23	5	0	0	0	0.12556	1	11032	11032		0.13989	0.13989	1	14871000			21153	6938	10414	10453	24216	24216					0.1566867821543383
LVALLAHPLA	10	Unmodified	_LVALLAHPLA_					0	0	0			REV__ENSG00000124574|ENST00000372530|ABCC10	REV__ENSG00000124574|ENST00000372530|ABCC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3265563845634	2	509.326402	1016.63825	1.5564	0.00079271	-1.0331	-0.00052617	0.52332	0.00026654	509.3258335197192	70.569	0.59219	70.891	70.678	71.27	0.32224					59	18	4	0	0	0	0.79742	1	29501	29501		12.532	1.7076	1	22463000	+		21154	9649	10415	10454	24217	24217					0.13059800616304074
LVALVTEV	8	Unmodified	_LVALVTEV_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	843.5194579958916	1	843.518596	842.51132	1.6047	0.0013536	-1.126	-0.00094983	0.47864	0.00040374	843.5174814774123	65.264	0.31224	67.172	67.032	67.344	1.9085					15	9	2	0	0	0	0.057965	1	27387	27387		104.31	0	1	1335900			21155	3669	10416	10455	24218	24218					0.08376454671338252
LVALVTEV	8	Unmodified	_LVALVTEV_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	843.518596	842.51132	1.6724	0.0014107	-3.25	-0.0027414	-1.5776	-0.0013308	843.5176513338604	67.366	0.28146	67.366	67.288	67.569	0	0.13091	-0.0017908	NaN	104.31	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386210			21156	3669	10416	10455							0.08376454671338252
LVALVTEV	8	Unmodified	_LVALVTEV_					0	0	0		ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	ENSG00000163312|ENST00000295488|HELQ	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	843.518596	842.51132	2.1737	0.0018336	-0.046206	-3.8975E-05	2.1275	0.0017946	843.5192443818745	65.737	0.33788	67.136	66.941	67.279	1.3989	-0.099085	0.00091169	NaN	104.31	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1636200			21157	3669	10416	10455							0.08376454671338252
LVAPGRPLTL	10	Unmodified	_LVAPGRPLTL_					0	0	0			REV__ENST00000496560.1_1_6:32001776-32002287:+|nuORF	REV__ENST00000496560.1_1_6:32001776-32002287:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2220336794853	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.625	1	69.625	69.125	70.125	0								0	0	0	0.66222	1	28994	28994		0.69767	0.42865	1		+		21158	13468	10417	10456	24219	24219					0.12766899127996112
LVAPSVVVK	9	Unmodified	_LVAPSVVVK_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5365783572197	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.635	1	27.907	27.407	28.407	0.27119								0	0	0	0.42693	1	11555	11555		0.86438	0	1				21159	5058	10418	10457	24220	24220					0.1262842283366581
LVAPSVVVK	9	Unmodified	_LVAPSVVVK_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5365783572197	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.75	1	28.021	27.521	28.521	0.27119								0	0	0	0.42693	1	11604	11604		0.86438	0.46366	1				21160	5058	10418	10457	24221	24221					0.1262842283366581
LVAPSVVVK	9	Unmodified	_LVAPSVVVK_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5361511111259	3	304.535661	910.585153	-0.42216	-0.00012856	1.9684	0.00059944	1.5462	0.00047088	304.53621423411187	16.191	0.52188	17.23	17.062	17.584	1.0392					63	18	4	0	0	0	0.7849	1	6685	6685		2.2828	0	1	20601000			21161	5058	10418	10457	24222	24222					0.1262842283366581
LVAPSVVVK	9	Unmodified	_LVAPSVVVK_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5361816287041	3	304.535661	910.585153	-0.34553	-0.00010523	1.9601	0.00059691	1.6145	0.00049168	304.53621774720295	18.041	0.97282	19.489	19.175	20.147	1.448					91	32	4	0	0	0	0.84195	1	7424	7424		2.2828	1.4184	1	16690000			21162	5058	10418	10457	24223	24223					0.1262842283366581
LVAPSVVVK	9	Unmodified	_LVAPSVVVK_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5369445681572	3	304.535661	910.585153	-0.086446	-2.6326E-05	3.729	0.0011356	3.6426	0.0011093	304.5369532135439	24.448	1.372	26.133	25.443	26.815	1.6845					84	45	3	0	0	0	0.11916	1	10101	10101		2.2828	0	1	9367600			21163	5058	10418	10457	24224	24224					0.1262842283366581
LVAPVVKK	8	Unmodified	_LVAPVVKK_					0	0	0		ENSG00000136875|ENST00000374198|PRPF4;nc|ENSG00000136875|O43172|PRPF4	ENSG00000136875|ENST00000374198|PRPF4	ENSG00000136875|ENST00000374198|PRPF4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2974731326103	2	427.297114	852.579674	0.46904	0.00020042	1.8941	0.00080933	2.3631	0.0010097	427.2975567564471	109.12	0.81297	109.12	108.88	109.69	0					72	36	3	0	0	0	0.89176	1	47182	47182		0.79363	0	1	22330000			21164	2745	10419	10458	24225	24225					0.14748744041855844
LVAQKHRSQ	9	Unmodified	_LVAQKHRSQ_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1920654177666	2	533.809439	1065.60433	2.2941	0.0012246	1.7432	0.00093055	4.0373	0.0021551	533.8111097412784	46.792	0.2164	48.768	48.653	48.87	1.976					9	6	2	0	0	0	0.11833	1	19570	19570		0.45834	0	1	653410	+		21165	9442	10420	10459	24226	24226					0.07414772177276063
LVARRRWER	9	Unmodified	_LVARRRWER_					0	0	0		nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	nc|ENSG00000187260|Q86TI4-2|WDR86	MSMS	GG20161007_CRH_Patient100_A02_01	1	621.3723022341728	2	621.37053	1240.72651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.928	1	46.928	46.428	47.428	0								0	0	0	0.42693	1	19612	19612		2.0598	0	1				21166	7952	10421	10460	24227	24227					0.11577233979483026
LVASHSEQL	9	Unmodified	_LVASHSEQL_					0	0	0			REV__ENST00000583071.1_1_17:73488566-73488914:+|nuORF	REV__ENST00000583071.1_1_17:73488566-73488914:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	491.7833740115166	2	492.261456	982.50836	2.4674	0.0012146	2.6359	0.0012976	5.1034	0.0025122	492.2618464922642	76.625	0.44913	78.392	78.19	78.639	1.7672					22	13	3	0	0	0	0.10306	1	32062	32062		19.439	1.304	1	501220	+		21167	11225	10422	10461	24228	24228					0.01640579546540266
LVCAAGTR	8	Unmodified	_LVCAAGTR_					0	0	0			REV__ENST00000569820.5_1_16:89615433-89615544:+|nuORF	REV__ENST00000569820.5_1_16:89615433-89615544:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.7175170779228	2	395.71563	789.416708	2.0746	0.00082094	1.0781	0.00042663	3.1527	0.0012476	395.7157141507905	48.133	0.30686	50.11	49.959	50.266	1.9772					15	9	2	0	0	0	0.76103	1	20176	20176		24.674	2.9272	1	896080	+		21168	13958	10423	10462	24229	24229					0.013576176483411473
LVCAAGTR	8	Unmodified	_LVCAAGTR_					0	0	0			REV__ENST00000569820.5_1_16:89615433-89615544:+|nuORF	REV__ENST00000569820.5_1_16:89615433-89615544:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	395.71563	789.416708	2.0746	0.00082094	1.0781	0.00042663	3.1527	0.0012476	395.7157141507905	48.133	0.30686	50.11	49.959	50.266	1.9772	0.02312	-0.00092486	NaN	24.674	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	896080	+		21169	13958	10423	10462							0.013576176483411473
LVCLATWFT	9	Unmodified	_LVCLATWFT_					0	0	0		tr|A0A7D7A3B2|A0A7D7A3B2_9CLOTFormate/nitritetransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23050PE=3SV=1	tr|A0A7D7A3B2|A0A7D7A3B2_9CLOTFormate/nitritetransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23050PE=3SV=1	tr|A0A7D7A3B2|A0A7D7A3B2_9CLOTFormate/nitritetransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23050PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.2758666872978	2	527.275521	1052.53649	2.7344	0.0014418	-1.6723	-0.00088178	1.0621	0.00056001	527.2749430034194	86.185	0.24226	86.438	86.281	86.524	0.25227					11	7	2	0	0	0	0.76456	1	36041	36041		4.756	0	1	427480			21170	17275	10424	10463	24230	24230					0.012321862022645291
LVDDNYFYL	9	Unmodified	_LVDDNYFYL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	581.2773925662041	2	581.276772	1160.53899	1.8138	0.0010543	-0.26541	-0.00015428	1.5484	0.00090006	581.2763208283094	74.287	0.25782	74.287	74.141	74.399	0					12	7	2	0	0	0	0.5697	1	30941	30941		12.532	4.6214	1	878790			21171	4323	10425	10464	24231	24231					-0.034856868590850354
LVDDNYFYL	9	Unmodified	_LVDDNYFYL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	581.276772	1160.53899	2.302	0.0013381	-2.5776	-0.0014983	-0.2756	-0.0001602	581.2747506228626	73.86	0.25592	74.185	74.04	74.296	0.32494	-0.050888	-0.0021158	NaN	12.532	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	705430			21172	4323	10425	10464							-0.034856868590850354
LVDLIYKRS	9	Unmodified	_LVDLIYKRS_					0	0	0		tr|A0A7D7AEY7|A0A7D7AEY7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04015PE=4SV=1	tr|A0A7D7AEY7|A0A7D7AEY7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04015PE=4SV=1	tr|A0A7D7AEY7|A0A7D7AEY7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8328124880791	2	553.832049	1105.64954	1.2808	0.00070934	-3.4528	-0.0019123	-2.172	-0.0012029	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.34572	1	29103	29103		23.148	5.0021	1	2160700			21173	17337	10426	10465	24232	24232					0.10094577919812764
LVDYMYWEK	9	Unmodified	_LVDYMYWEK_					0	0	0		ENSG00000163380|ENST00000420581|LMOD3	ENSG00000163380|ENST00000420581|LMOD3	ENSG00000163380|ENST00000420581|LMOD3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	624.2374145388603	2	623.794275	1245.574	1.4411	0.00089895	2.922	0.0018227	4.3631	0.0027217	623.7974136839017	26.76	0.17706	26.76	26.656	26.833	0					7	5	2	0	0	0	0.11719	1	11175	11175		7.2892	3.3448	1	384790			21174	3674	10427	10466	24233	24233					-0.03896767322794403
LVEAIRKR	8	Unmodified	_LVEAIRKR_					0	0	0			REV__ENSG00000155980|ENST00000455537|KIF5A	REV__ENSG00000155980|ENST00000455537|KIF5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.8201782107353	2	492.819276	983.623999	0.95907	0.00047265	1.9079	0.00094024	2.867	0.0014129	492.81999866343335	101.67	0.15109	101.67	101.56	101.71	0					10	4	3	0	0	0	0.89178	1	42584	42584		0.69038	0	1	2293300	+		21175	10506	10428	10467	24234	24234					0.1315314818804154
LVELYHDSMFC	11	Unmodified	_LVELYHDSMFC_					0	0	0			REV__ENSG00000176595|ENST00000320248|KBTBD11	REV__ENSG00000176595|ENST00000320248|KBTBD11	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8703796267509	3	452.870275	1355.58899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.263	1	2.0114	1.5114	2.5114	0.7484								0	0	0	0.63775	1	523	523		0.094841	0	1		+		21176	11186	10429	10468	24235	24235					-0.07457643517113866
LVERVQRDPRR	11	Unmodified	_LVERVQRDPRR_					0	0	0		ENST00000487235.5_1_1:153921840-153927447:-|nuORF;ENSG00000160741|ENST00000368633|CRTC2	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7110778689384	4	356.711471	1422.81678	-0.81592	-0.00029105	-0.43818	-0.0001563	-1.2541	-0.00044735	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	1.0308	2	22050	22050;22088		1.9275	0.59786	1	19031000			21177	3570	10430	10469	24236;24237	24236					0.12228238517241152
LVERVQRDPRR	11	Unmodified	_LVERVQRDPRR_					0	0	0		ENST00000487235.5_1_1:153921840-153927447:-|nuORF;ENSG00000160741|ENST00000368633|CRTC2	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	ENST00000487235.5_1_1:153921840-153927447:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.7104369997978	4	356.711471	1422.81678	0.011432	4.0779E-06	-1.4488	-0.00051682	-1.4374	-0.00051274	356.96175954541644	50.838	1.1277	52.232	51.74	52.868	1.3938					128	36	4	0	0	0	1.0308	1	21313	21313		1.9275	0.33522	1	29728000			21178	3570	10430	10469	24238	24238					0.12228238517241152
LVESALRR	8	Unmodified	_LVESALRR_					0	0	0		nc|ENSG00000136098|P51956-2|NEK3;ENSG00000136098|ENST00000610828|NEK3	nc|ENSG00000136098|P51956-2|NEK3	nc|ENSG00000136098|P51956-2|NEK3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	472.7880737185478	2	472.287808	942.561064	2.2787	0.0010762	0.075276	3.5552E-05	2.354	0.0011118	472.28760227699803	78.987	1.1995	78.987	78.441	79.641	0					96	38	5	0	0	0	2.3239	1	32727	32727		40.449	8.3316	1	189500000			21179	2706	10431	10470	24239	24239					0.08748582399982752
LVETPCPDV	9	Unmodified	_LVETPCPDV_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1;ENST00000491536.5_1_1:12024755-12035393:+|nuORF	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7408019900322	2	486.738968	971.463383	2.2224	0.0010817	2.7054	0.0013168	4.9278	0.0023986	486.73971397221277	68.166	0.34194	69.544	69.364	69.706	1.3778					25	10	4	0	0	0	0.22861	1	28581	28581		39.957	11.47	1	4454800			21180	1040	10432	10471	24240	24240					-0.023489873110293047
LVEVTPENI	9	Unmodified	_LVEVTPENI_					0	0	0		tr|A0A7D6VXS5|A0A7D6VXS5_9CLOTLargeribosomalsubunitassemblyfactorBipAOS=ClostridiumintestinaleOX=36845GN=typAPE=3SV=1	tr|A0A7D6VXS5|A0A7D6VXS5_9CLOTLargeribosomalsubunitassemblyfactorBipAOS=ClostridiumintestinaleOX=36845GN=typAPE=3SV=1	tr|A0A7D6VXS5|A0A7D6VXS5_9CLOTLargeribosomalsubunitassemblyfactorBipAOS=ClostridiumintestinaleOX=36845GN=typAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.2810546755791	2	507.279315	1012.54408	2.8687	0.0014552	-0.22424	-0.00011375	2.6444	0.0013415	507.27959451715003	86.22	0.44865	86.472	86.25	86.699	0.25227					33	14	3	0	0	0	0.76456	1	36036	36036		4.756	0.81161	1	2092900			21181	16988	10433	10472	24241	24241					0.03830617003529824
LVFDTTDSSEV	11	Unmodified	_LVFDTTDSSEV_					0	0	0		ENST00000506586.1_1_5:93928514-93929327:+|nuORF	ENST00000506586.1_1_5:93928514-93929327:+|nuORF	ENST00000506586.1_1_5:93928514-93929327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.7870971560478	2	606.785158	1211.55576	1.7574	0.0010664	3.322	0.0020157	5.0794	0.0030821	606.7873159854626	71.555	0.28203	72.896	72.779	73.061	1.3415					14	8	2	0	0	0	0.96769	1	30039	30039		5.7319	0.43497	1	919160			21182	7006	10434	10473	24242	24242					-0.041552307638312413
LVFFFVME	8	Unmodified	_LVFFFVME_					0	0	0		chr4:82829058-82841712|91|32.44|0.82|5.3|-|1|TE_info:AluSz,AluSz_dup24189,Alu,SINE,donor,+,82841712,82842017|SEC31A,None|1	chr4:82829058-82841712|91|32.44|0.82|5.3|-|1|TE_info:AluSz,AluSz_dup24189,Alu,SINE,donor,+,82841712,82842017|SEC31A,None|1	chr4:82829058-82841712|91|32.44|0.82|5.3|-|1|TE_info:AluSz,AluSz_dup24189,Alu,SINE,donor,+,82841712,82842017|SEC31A,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2694579958916	2	516.267164	1030.51978	2.1422	0.0011059	3.4008	0.0017557	5.543	0.0028617	516.2686002257841	40.077	0.46349	41.94	41.707	42.171	1.8624					26	14	2	0	0	0	0.80415	1	16784	16784		20.871	0.41758	1	2004200			21183	264	10435	10474	24243	24243					0.005736853163170963
LVFLRFVKYQI	11	Unmodified	_LVFLRFVKYQI_					0	0	0		L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense;L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|184|1|anti-sense	L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense	L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	475.9625427126884	3	475.958741	1424.85439	2.4941	0.0011871	3.3998	0.0016182	5.8939	0.0028052	475.9612371518722	52.56	2.4165	52.883	52.432	54.849	0.32285					209	79	6	0	0	0	0.90709	5	21919	21919;21956;21995;22044;22084		4.7159	2.4632	1	373100000			21184	7745	10436	10475	24244;24245;24246;24247;24248	24244					0.15895936730180438
LVFLRFVKYQI	11	Unmodified	_LVFLRFVKYQI_					0	0	0		L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense;L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|184|1|anti-sense	L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense	L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|314|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4396240115166	2	713.434473	1424.85439	1.6666	0.001189	3.62	0.0025826	5.2867	0.0037717	713.4370726235239	52.513	0.9479	52.839	52.496	53.444	0.32553					100	31	5	0	0	0	0.70499	3	21958	21958;21996;22088		18.146	9.9908	1	35978000			21185	7745	10436	10475	24249;24250;24251	24249					0.15895936730180438
LVFRLRAI	8	Unmodified	_LVFRLRAI_					0	0	0			REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3297912478447	2	494.326737	986.63892	2.6992	0.0013343	0.58777	0.00029055	3.2869	0.0016248	494.32728165400533	78.56	1.7668	79.827	79.481	81.247	1.2668					106	56	4	0	0	0	0.80415	1	32961	32961		20.871	6.2895	1	7931600	+		21186	13836	10437	10476	24252	24252					0.14506640056026754
LVFRLRAI	8	Unmodified	_LVFRLRAI_					0	0	0			REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3283874392509	2	494.326737	986.63892	1.9183	0.00094828	0.10368	5.1251E-05	2.022	0.00099953	494.32686268141015	78.101	1.5502	79.852	79.467	81.017	1.7514					114	49	4	0	0	0	0.80415	1	32726	32726		20.871	2.7362	1	7365800	+		21187	13836	10437	10476	24253	24253					0.14506640056026754
LVFRLRAI	8	Unmodified	_LVFRLRAI_					0	0	0			REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	494.326737	986.63892	1.481	0.00073207	3.441	0.001701	4.9219	0.002433	494.328269129289	79.923	0.49245	79.923	79.703	80.195	0	0.080914	0.0026325	NaN	20.871	34	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1478300	+		21188	13836	10437	10476							0.14506640056026754
LVFRLRAI	8	Unmodified	_LVFRLRAI_					0	0	0			REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	494.326737	986.63892	2.4352	0.0012038	1.6538	0.00081749	4.0889	0.0020213	494.3283625644917	79.466	0.57283	79.766	79.59	80.163	0.30047	-0.076052	0.00086554	NaN	20.871	29	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2308000	+		21189	13836	10437	10476							0.14506640056026754
LVFRLRAI	8	Unmodified	_LVFRLRAI_					0	0	0			REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	REV__ENST00000552197.5_1_12:46661279-46661483:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	494.326737	986.63892	2.6992	0.0013343	0.58777	0.00029055	3.2869	0.0016248	494.32728165400533	78.56	1.7668	79.827	79.481	81.247	1.2668	-0.014937	-0.00018834	NaN	20.871	106	56	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7931600	+		21190	13836	10437	10476							0.14506640056026754
LVFVKILK	8	Unmodified	_LVFVKILK_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.3364745974541	2	480.336239	958.657924	1.4704	0.00070627	0.78128	0.00037528	2.2517	0.0010815	480.33626173772956	109.63	0.74987	109.63	109.33	110.08	0					69	29	3	0	0	0	0.89178	1	47444	47444		0.69038	0	1	16984000	+		21191	11097	10438	10477	24254	24254					0.17694176627094294
LVFVKILK	8	Unmodified	_LVFVKILK_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.3398925662041	2	480.336239	958.657924	3.1546	0.0015153	3.9694	0.0019067	7.1241	0.0034219	480.33767929475925	109.57	0.62939	109.73	109.47	110.09	0.1548					51	23	3	0	0	0	0.89178	1	47613	47613		0.69038	0	1	6933300	+		21192	11097	10438	10477	24255	24255					0.17694176627094294
LVFVKILK	8	Unmodified	_LVFVKILK_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	480.336239	958.657924	1.4704	0.00070627	0.78128	0.00037528	2.2517	0.0010815	480.33626173772956	109.63	0.74987	109.63	109.33	110.08	0	-0.055912	-6.4632E-05	NaN	0.69038	69	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16984000	+		21193	11097	10438	10477							0.17694176627094294
LVFVKILK	8	Unmodified	_LVFVKILK_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	480.336239	958.657924	3.5615	0.0017107	-0.14505	-6.9674E-05	3.4165	0.0016411	480.33571885782436	109.66	0.72376	109.71	109.38	110.11	0.048843	0.02593	-0.00095453	NaN	0.69038	63	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13539000	+		21194	11097	10438	10477							0.17694176627094294
LVFVKILK	8	Unmodified	_LVFVKILK_					0	0	0			REV__ENSG00000173409|ENST00000310256|ARV1	REV__ENSG00000173409|ENST00000310256|ARV1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.336239	958.657924	3.2569	0.0015644	2.8852	0.0013859	6.1421	0.0029503	480.33729419646295	109.56	0.65701	109.71	109.54	110.2	0.15898	0.029981	0.0019565	NaN	0.69038	53	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10484000	+		21195	11097	10438	10477							0.17694176627094294
LVFVTNVTL	9	Unmodified	_LVFVTNVTL_					0	0	0			REV__RNF139|p.L188V|1|0.4|ENSG00000170881|chr8:124486211-124486211|T/G|missense_variant	REV__RNF139|p.L188V|1|0.4|ENSG00000170881|chr8:124486211-124486211|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3045837283134	2	503.302593	1004.59063	2.8297	0.0014242	1.8371	0.00092464	4.6668	0.0023488	503.3033081843286	60.144	0.4819	61.564	61.421	61.903	1.4196					31	15	3	0	0	0	0.10473	1	25230	25230		47.749	1.7277	1	1814000	+		21196	14613	10439	10478	24256	24256					0.08852101625473097
LVFYHVVL	8	Unmodified	_LVFYHVVL_					0	0	0		ENST00000231368.9_1_5:96366122-96366233:+|nuORF	ENST00000231368.9_1_5:96366122-96366233:+|nuORF	ENST00000231368.9_1_5:96366122-96366233:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.7418090701103	2	495.294571	988.574589	1.7089	0.00084643	2.3929	0.0011852	4.1019	0.0020316	495.29493000861	49.496	0.40996	51.473	51.223	51.633	1.9772					23	12	3	0	0	0	2.3239	1	20694	20694		24.21	4.771	1	483200			21197	5550	10440	10479	24257	24257					0.07984440179222929
LVFYHVVL	8	Unmodified	_LVFYHVVL_					0	0	0		ENST00000231368.9_1_5:96366122-96366233:+|nuORF	ENST00000231368.9_1_5:96366122-96366233:+|nuORF	ENST00000231368.9_1_5:96366122-96366233:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	495.294571	988.574589	2.6476	0.0013113	1.6398	0.00081219	4.2874	0.0021235	495.29567171907763	50.082	0.22545	51.473	51.387	51.613	1.3911	0.00021903	-0.00030581	NaN	24.21	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740470			21198	5550	10440	10479							0.07984440179222929
LVGALYALY	9	Unmodified	_LVGALYALY_					0	0	0			REV__PDE3A|p.A263Gfs*32|1|0.15|ENSG00000172572|chr12:20370071-20370072|-/GGGTGCGCCTGCCTCTGGCTGT|frameshift_variant	REV__PDE3A|p.A263Gfs*32|1|0.15|ENSG00000172572|chr12:20370071-20370072|-/GGGTGCGCCTGCCTCTGGCTGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.5647460818291	1	982.560795	981.553519	3.2927	0.0032353	-0.58403	-0.00057384	2.7087	0.0026614	982.5600930018919	75.445	4.7328	76.752	76.247	80.98	1.3063					380	152	4	0	0	0	0.16975	16	32202	32202;32296;32441;32491;32594;32636;32742;32843;32894;32948;32999;33054;33134;33257;33340;33393		36.466	6.4266	1	50304000	+		21199	11071	10441	10480	24258;24259;24260;24261;24262;24263;24264;24265;24266;24267;24268;24269;24270;24271;24272;24273	24258					0.06200430079695707
LVGALYALY	9	Unmodified	_LVGALYALY_					0	0	0			REV__PDE3A|p.A263Gfs*32|1|0.15|ENSG00000172572|chr12:20370071-20370072|-/GGGTGCGCCTGCCTCTGGCTGT|frameshift_variant	REV__PDE3A|p.A263Gfs*32|1|0.15|ENSG00000172572|chr12:20370071-20370072|-/GGGTGCGCCTGCCTCTGGCTGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5662109255791	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.16975	8	32529	32060;32424;32529;32698;32803;32923;32998;33054		36.466	0	1	44767000	+		21200	11071	10441	10480	24274;24275;24276;24277;24278;24279;24280;24281	24276					0.06200430079695707
LVGGPKLN	8	Unmodified	_LVGGPKLN_					0	0	0			REV__ENST00000392952.7_1_10:116286422-116286527:-|nuORF	REV__ENST00000392952.7_1_10:116286422-116286527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2471191287041	2	399.247621	796.480688	0.59239	0.00023651	-1.0097	-0.00040313	-0.41733	-0.00016662	399.2473560083675	62.431	0.93277	62.431	61.993	62.926	0					58	29	4	0	0	0	0.89008	1	26025	26025		2.5775	0	1	8393800	+		21201	12806	10442	10481	24282	24282					0.07430721076934788
LVGGPKLN	8	Unmodified	_LVGGPKLN_					0	0	0			REV__ENST00000392952.7_1_10:116286422-116286527:-|nuORF	REV__ENST00000392952.7_1_10:116286422-116286527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2470580935478	2	399.247621	796.480688	1.9812	0.00079101	-2.8426	-0.0011349	-0.86136	-0.0003439	399.24638448526576	62.229	0.62243	62.558	62.29	62.912	0.32974					40	19	3	0	0	0	0.89008	1	26060	26060		2.5775	0	1	10445000	+		21202	12806	10442	10481	24283	24283					0.07430721076934788
LVGGRRAREVV	11	Unmodified	_LVGGRRAREVV_					0	0	0		ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	ENSG00000185915|ENST00000379499|KLHL34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3734008669853	2	606.370195	1210.72584	2.6989	0.0016366	-0.80005	-0.00048513	1.8989	0.0011514	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	1.0131	1	32180	32180		2.9952	0	1	6855700			21203	4771	10443	10482	24284	24284					0.12890394539772387
LVGGSSRKPT	10	Unmodified	_LVGGSSRKPT_					0	0	0		ENST00000434221.5_1_22:28389243-28389507:+|nuORF	ENST00000434221.5_1_22:28389243-28389507:+|nuORF	ENST00000434221.5_1_22:28389243-28389507:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2911865115166	2	501.290548	1000.56654	2.3769	0.0011915	-0.13659	-6.8474E-05	2.2403	0.001123	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.89803	1	28002	28002		1.4819	0	1	2426300			21204	6517	10444	10483	24285	24285					0.06628261191792717
LVGNDFKSI	9	Unmodified	_LVGNDFKSI_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7750121951103	2	496.7742	991.533846	2.23	0.0011078	-0.32238	-0.00016015	1.9076	0.00094763	496.77431212102965	70.126	0.4166	71.963	71.751	72.167	1.8378					37	12	4	0	0	0	0.54523	1	29420	29420		13.508	1.8676	1	6384800			21205	1597	10445	10484	24286	24286					0.037740540689469526
LVGTRSPIGRR	11	Unmodified	_LVGTRSPIGRR_					0	0	0			REV__ENST00000496391.5_2_7:102065935-102066592:+|nuORF	REV__ENST00000496391.5_2_7:102065935-102066592:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3707763552666	2	606.370195	1210.72584	1.9807	0.0012011	-0.84354	-0.0005115	1.1372	0.00068956	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	1.0084	1	32436	32436		3.2813	1.4371	1	10235000	+		21206	13465	10446	10485	24287	24287					0.12890394539772387
LVHRLTRDAP	10	Unmodified	_LVHRLTRDAP_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3445922732353	2	589.343646	1176.67274	2.284	0.001346	-1.2429	-0.00073247	1.0411	0.00061357	589.3428430300036	75.817	0.77608	76.138	75.646	76.422	0.32163					44	24	2	0	0	0	0.89803	1	31700	31700		1.4819	0	1	880400			21207	1345	10447	10486	24288	24288					0.09147016757128767
LVIEEEHLL	9	Unmodified	_LVIEEEHLL_					0	0	0			REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.8129760622978	2	547.808239	1093.60193	1.4194	0.00077758	3.7607	0.0020601	5.1801	0.0028377	547.8101065806128	66.741	0.29715	68.63	68.436	68.733	1.8889					12	9	2	0	0	0	0.41943	1	28008	28008		19.439	3.5918	1	1518800	+		21208	15441	10448	10487	24289	24289					0.058868789289590495
LVIEEEHLL	9	Unmodified	_LVIEEEHLL_					0	0	0			REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	547.808239	1093.60193	1.3032	0.00071391	2.8919	0.0015842	4.1951	0.0022981	547.809925665916	68.836	0.18849	68.836	68.673	68.862	0	0.12313	-0.0010457	NaN	19.439	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	495890	+		21209	15441	10448	10487							0.058868789289590495
LVIEEEHLL	9	Unmodified	_LVIEEEHLL_					0	0	0			REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	547.808239	1093.60193	1.5569	0.00085287	6.0008	0.0032873	7.5577	0.0041402	547.8116457635522	68.351	0.2798	68.673	68.502	68.782	0.32224	-0.040114	0.0023605	NaN	19.439	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615830	+		21210	15441	10448	10487							0.058868789289590495
LVIEEEHLL	9	Unmodified	_LVIEEEHLL_					0	0	0			REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	REV__tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	547.808239	1093.60193	1.4194	0.00077758	3.7607	0.0020601	5.1801	0.0028377	547.8101065806128	66.741	0.29715	68.63	68.436	68.733	1.8889	-0.08302	-9.3852E-05	NaN	19.439	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1518800	+		21211	15441	10448	10487							0.058868789289590495
LVIKIKERPVK	11	Unmodified	_LVIKIKERPVK_					0	0	0		tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	tr|A0A7D6W144|A0A7D6W144_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01820PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9449951052666	2	661.947747	1321.88094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.525	1	59.525	59.025	60.025	0								0	0	0	0.63775	1	24820	24820		3.2813	1.6287	1				21212	17018	10449	10488	24290	24290					0.23287625621492225
LVIKQCQLLPL	11	Unmodified	_LVIKQCQLLPL_					0	0	0			REV__tr|A0A553SUB5|A0A553SUB5_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_06645PE=4SV=1	REV__tr|A0A553SUB5|A0A553SUB5_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_06645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	633.8415405154228	2	634.393959	1266.77336	2.8287	0.0017945	-2.9245	-0.0018553	-0.095856	-6.081E-05	634.3919926008851	64.532	0.1826	65.939	65.865	66.047	1.4071					9	5	2	0	0	0	0.14606	1	27103	27103		5.7319	1.7875	1	645750	+		21213	15285	10450	10489	24291	24291					0.15064912695765997
LVIKQCQLLPL	11	Unmodified	_LVIKQCQLLPL_					0	0	0			REV__tr|A0A553SUB5|A0A553SUB5_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_06645PE=4SV=1	REV__tr|A0A553SUB5|A0A553SUB5_NIACIHADfamilyphosphataseOS=NialliacirculansOX=1397GN=CEQ21_06645PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	634.393959	1266.77336	2.3625	0.0014987	-2.8377	-0.0018002	-0.47525	-0.0003015	634.3913615945214	64.019	0.18536	65.947	65.795	65.981	1.928	0.0043532	9.5462E-05	NaN	5.7319	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477930	+		21214	15285	10450	10489							0.15064912695765997
LVILIIIKY	9	Unmodified	_LVILIIIKY_					0	0	0		tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531921267509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.14	1	70.14	69.64	70.64	0								0	0	0	0.42693	1	29206	29206		0.23584	0	1				21215	16852	10451	10490	24292	24292					0.20175288004134018
LVILIIIKY	9	Unmodified	_LVILIIIKY_					0	0	0		tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533141970634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.266	1	70.266	69.766	70.766	0								0	0	0	0.42693	1	29259	29259		0.23584	0	1				21216	16852	10451	10490	24293	24293					0.20175288004134018
LVILIIIKY	9	Unmodified	_LVILIIIKY_					0	0	0		tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543517947197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.558	1	97.558	97.058	98.058	0								0	0	0	0.42693	1	40787	40787		0.23584	0	1				21217	16852	10451	10490	24294	24294					0.20175288004134018
LVILQKPT	8	Unmodified	_LVILQKPT_					0	0	0		ENSG00000171914|ENST00000636159|TLN2;TLN2|p.L2360Pfs*51|1|0.07|ENSG00000171914|chr15:62833577-62833578|-/T|frameshift_variant;TLN2|p.P2264A|1|0.28|ENSG00000171914|chr15:62819534-62819534|C/G|missense_variant	ENSG00000171914|ENST00000636159|TLN2	ENSG00000171914|ENST00000636159|TLN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3002197146416	2	456.299853	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.06	1	106.22	105.72	106.72	0.16174								0	0	0	1.0178	1	45270	45270		2.0598	0.21551	1				21218	4219	10452	10491	24295	24295					0.1262842283365444
LVISGVLLYL	10	Unmodified	_LVISGVLLYL_					0	0	0		tr|A0A553SGG1|A0A553SGG1_NIACIFlagellarbasalbodyrodproteinOS=NialliacirculansOX=1397GN=CEQ21_10765PE=4SV=1	tr|A0A553SGG1|A0A553SGG1_NIACIFlagellarbasalbodyrodproteinOS=NialliacirculansOX=1397GN=CEQ21_10765PE=4SV=1	tr|A0A553SGG1|A0A553SGG1_NIACIFlagellarbasalbodyrodproteinOS=NialliacirculansOX=1397GN=CEQ21_10765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3500854372978	2	545.349543	1088.68453	2.5111	0.0013694	0.89403	0.00048756	3.4052	0.001857	545.3497392511252	80.143	0.52925	81.394	81.078	81.608	1.2512					23	16	2	0	0	0	0.5476	1	33627	33627		25.399	4.9457	1	833890			21219	16108	10453	10492	24296	24296					0.14373820727746534
LVKAPPAK	8	Unmodified	_LVKAPPAK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2743713259697	2	412.273638	822.532724	2.9547	0.0012181	-0.64058	-0.0002641	2.3141	0.00095403	412.2733706471872	107.83	0.27182	107.89	107.75	108.02	0.052444					44	14	4	0	0	0	0.89178	1	46183	46183		0.69038	0	1	1819999999.9999998	+		21220	10496	10454	10493	24297	24297					0.11435884490686021
LVKFPWSFIK	10	Unmodified	_LVKFPWSFIK_					0	0	0			REV__tr|A0A7D6VSX0|A0A7D6VSX0_9CLOTPro-sigmaKprocessinginhibitorBofAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00645PE=4SV=1	REV__tr|A0A7D6VSX0|A0A7D6VSX0_9CLOTPro-sigmaKprocessinginhibitorBofAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5895263552666	3	422.253265	1263.73797	2.9221	0.0012339	3.0468	0.0012865	5.9689	0.0025204	422.58780465673277	89.992	0.41933	90.201	89.92	90.34	0.20904					29	12	3	0	0	0	0.89588	1	37691	37691		1.9064	0.1641	1	1206800	+		21221	15464	10455	10494	24298	24298					0.11664618230270207
LVKFPWSFIK	10	Unmodified	_LVKFPWSFIK_					0	0	0			REV__tr|A0A7D6VSX0|A0A7D6VSX0_9CLOTPro-sigmaKprocessinginhibitorBofAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00645PE=4SV=1	REV__tr|A0A7D6VSX0|A0A7D6VSX0_9CLOTPro-sigmaKprocessinginhibitorBofAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	422.5895263552666	3	422.253265	1263.73797	2.9221	0.0012339	3.0468	0.0012865	5.9689	0.0025204	422.58780465673277	89.992	0.41933	90.201	89.92	90.34	0.20904					29	12	3	0	0	0	0.12556	1	37691	37691		1.9064	0.1641	1	1206800	+		21222	15464	10455	10494	24299	24299					0.11664618230270207
LVKFRKRRRLF	11	Unmodified	_LVKFRKRRRLF_					0	0	0			REV__ENSG00000171956|ENST00000396057|FOXB1	REV__ENSG00000171956|ENST00000396057|FOXB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2483703494072	5	304.602937	1517.9783	-2.7928	-0.0008507	-0.13269	-4.0419E-05	-2.9255	-0.00089112	304.60292190969426	28.643	1.2001	28.643	28.194	29.394	0					66	38	2	0	0	0	0.14606	1	11929	11929		0	0	1	1236800	+		21223	11051	10456	10495	24300	24300					0.2400345234100314
LVKFRKRRRLF	11	Unmodified	_LVKFRKRRRLF_					0	0	0			REV__ENSG00000171956|ENST00000396057|FOXB1	REV__ENSG00000171956|ENST00000396057|FOXB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2490417361259	5	304.602937	1517.9783	0.98012	0.00029855	-2.7312	-0.00083194	-1.7511	-0.00053339	304.6018971894521	40.172	0.12704	40.484	40.381	40.508	0.31263					5	3	2	0	0	0	0.14606	1	16872	16872		0	0	1	232930	+		21224	11051	10456	10495	24301	24301					0.2400345234100314
LVKGNIYPV	9	Unmodified	_LVKGNIYPV_					0	0	0		nc|ENSG00000087299|Q9H9P8-2|L2HGDH;ENSG00000087299|ENST00000267436|L2HGDH	nc|ENSG00000087299|Q9H9P8-2|L2HGDH	nc|ENSG00000087299|Q9H9P8-2|L2HGDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.8030883669853	2	501.80276	1001.59097	2.4181	0.0012134	-1.9312	-0.00096909	0.48685	0.0002443	501.80161891403964	40.247	0.21574	41.557	41.421	41.637	1.3102					10	6	2	0	0	0	0.54523	1	16893	16893		13.508	2.684	1	651110			21225	1087	10457	10496	24302	24302					0.09023521345329755
LVKGNIYPV	9	Unmodified	_LVKGNIYPV_					0	0	0		nc|ENSG00000087299|Q9H9P8-2|L2HGDH;ENSG00000087299|ENST00000267436|L2HGDH	nc|ENSG00000087299|Q9H9P8-2|L2HGDH	nc|ENSG00000087299|Q9H9P8-2|L2HGDH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	501.80276	1001.59097	1.5431	0.00077435	-1.3284	-0.0006666	0.21473	0.00010775	501.80183734750455	39.89	0.24736	41.753	41.584	41.831	1.8624	0.097663	0.0002703	NaN	13.508	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	735740			21226	1087	10457	10496							0.09023521345329755
LVKHIIQLH	9	Unmodified	_LVKHIIQLH_					0	0	0			REV__ENSG00000106034|ENST00000310396|CPED1	REV__ENSG00000106034|ENST00000310396|CPED1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2194702029228	2	550.850576	1099.6866	3.0794	0.0016963	-0.78884	-0.00043453	2.2906	0.0012618	550.8505833365394	60.135	0.15943	62.101	61.977	62.136	1.9653					6	4	2	0	0	0	0.116	1	25199	25199		5.2307	0	1	541810	+		21227	9200	10458	10497	24303	24303					0.14074294256238318
LVKKPVPKL	9	Unmodified	_LVKKPVPKL_					0	0	0		ENST00000480342.5_1_1:8525723-8716473:-|nuORF;ENSG00000142599|ENST00000400908|RERE	ENST00000480342.5_1_1:8525723-8716473:-|nuORF;ENSG00000142599|ENST00000400908|RERE	ENSG00000142599|ENST00000400908|RERE	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.2447997927666	3	341.242589	1020.70594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.478	1	84.739	84.239	85.239	0.26083								0	0	0	0.42693	1	35329	35329		2.7352	1.6637	1				21228	6816;3000	10459	10498	24304	24304					0.19641250547113032
LVKKRRYQKQ	10	Unmodified	_LVKKRRYQKQ_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6;ERCC6|p.A1270Pfs*25|1|0.08|ENSG00000225830|chr10:49461527-49461527|C/-|frameshift_variant	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	674.4229003787041	2	673.922595	1345.83064	2.6808	0.0018066	-2.9141	-0.0019639	-0.23333	-0.00015725	674.421158492198	107.31	0.14817	107.36	107.29	107.44	0.052452					14	6	3	0	0	0	0.89803	1	45915	45915		1.4819	0.15237	1	19223000			21229	5292	10460	10499	24305	24305					0.17155516016350703
LVKKRRYQKQ	10	Unmodified	_LVKKRRYQKQ_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6;ERCC6|p.A1270Pfs*25|1|0.08|ENSG00000225830|chr10:49461527-49461527|C/-|frameshift_variant	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	673.922595	1345.83064	2.9023	0.0019559	-2.1209	-0.0014293	0.78142	0.00052662	674.4221312802495	107.28	0.18492	107.44	107.36	107.54	0.15781	0.01984	0.00064855	NaN	1.4819	31	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	116060000			21230	5292	10460	10499							0.17155516016350703
LVKKRRYQKQ	10	Unmodified	_LVKKRRYQKQ_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6;ERCC6|p.A1270Pfs*25|1|0.08|ENSG00000225830|chr10:49461527-49461527|C/-|frameshift_variant	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	673.922595	1345.83064	2.897	0.0019523	-2.9408	-0.0019819	-0.043813	-2.9527E-05	674.4217301322984	107.3	0.17092	107.46	107.35	107.52	0.15795	0.037843	-0.00045652	NaN	1.4819	28	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	100670000			21231	5292	10460	10499							0.17155516016350703
LVKKRSVSD	9	Unmodified	_LVKKRSVSD_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3163940310478	2	516.314023	1030.61349	2.5726	0.0013283	1.0898	0.00056268	3.6624	0.0018909	516.3145113483018	83.981	0.61716	83.981	83.689	84.306	0					71	19	5	0	0	0	0.85019	1	35025	35025		0.52476	0	1	135590000	+		21232	10072	10461	10500	24306	24306					0.0994112074295117
LVKLYRFLARR	11	Unmodified	_LVKLYRFLARR_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4819518923759	4	359.481857	1433.89832	0.726	0.00026099	1.1869	0.00042667	1.9129	0.00068766	359.4821179646642	27.451	1.1834	27.722	26.995	28.179	0.27119					153	38	5	0	0	0	1.0391	1	11560	11560		0.40827	0.2854	1	28988000			21233	761	10462	10501	24307	24307					0.19872965947138255
LVKLYRFLARR	11	Unmodified	_LVKLYRFLARR_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.7351562380791	4	359.481857	1433.89832	0.96498	0.00034689	3.3976	0.0012214	4.3626	0.0015683	359.4830407973349	31.97	1.4144	32.261	31.66	33.074	0.29086					108	45	3	0	0	0	1.0388	1	13581	13581		0.50596	0	1	1701600			21234	761	10462	10501	24308	24308					0.19872965947138255
LVKLYRFLARR	11	Unmodified	_LVKLYRFLARR_					0	0	0		ENST00000552705.5_1_19:49119841-49122400:-|nuORF;ENST00000552347.5_1_19:49120227-49122400:-|nuORF;ENSG00000063177|ENST00000549920|RPL18	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	ENST00000552705.5_1_19:49119841-49122400:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4825927615166	4	359.481857	1433.89832	0.2639	9.4868E-05	2.4587	0.00088385	2.7226	0.00097872	359.4826316800377	25.983	1.3716	27.699	26.877	28.249	1.7167					138	44	5	0	0	0	1.0391	1	10741	10741		0.40827	0.2854	1	33189000			21235	761	10462	10501	24309	24309					0.19872965947138255
LVKNFDKLV	9	Unmodified	_LVKNFDKLV_					0	0	0			REV__tr|A0A553SI26|A0A553SI26_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14030PE=4SV=1	REV__tr|A0A553SI26|A0A553SI26_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	359.2210265994072	3	359.221853	1074.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.9	1	101.08	100.58	101.58	0.18047								0	0	0	0.42693	1	42456	42456		1.1933	0	1		+		21236	14830	10463	10502	24310	24310					0.1093947940810267
LVKNRTRIV	9	Unmodified	_LVKNRTRIV_					0	0	0		nc|ENSG00000178809|Q86UV6-2|TRIM74;ENSG00000178809|ENST00000323819|TRIM73;ENSG00000155428|ENST00000285805|TRIM74	nc|ENSG00000178809|Q86UV6-2|TRIM74	nc|ENSG00000178809|Q86UV6-2|TRIM74	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2202636599541	2	549.858932	1097.70331	4.6203	0.0025405	-1.5331	-0.00084301	3.0871	0.0016975	549.8582389396508	88.032	0.22453	89.479	89.284	89.509	1.4467					10	6	2	0	0	0	0.116	1	37102	37102		5.2307	2.9279	1	417040			21237	3420	10464	10503	24311	24311					0.1583679514214964
LVKPPCPF	8	Unmodified	_LVKPPCPF_					0	0	0			REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7549316287041	2	450.754224	899.493896	2.7886	0.001257	-1.5039	-0.00067787	1.2848	0.00057912	450.75362588440214	75.444	0.43226	76.75	76.555	76.987	1.3063					44	13	4	0	0	0	0.88409	1	31696	31696		6.3541	0	1	14789000	+		21238	13597	10465	10504	24312	24312					0.040128358646711604
LVKPPCPF	8	Unmodified	_LVKPPCPF_					0	0	0			REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7551757693291	2	450.754224	899.493896	2.9183	0.0013155	-1.4619	-0.00065897	1.4564	0.00065649	450.753646535389	75.149	0.46561	76.931	76.73	77.196	1.7817					42	14	4	0	0	0	0.88409	2	31500	31500;31550		6.3541	6.3541	1	12890000	+		21239	13597	10465	10504	24313;24314	24313					0.040128358646711604
LVKPPCPF	8	Unmodified	_LVKPPCPF_					0	0	0			REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	REV__ENST00000515366.5_3_4:144298010-144301854:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	450.2762634158134	2	450.754224	899.493896	2.9183	0.0013155	-1.4619	-0.00065897	1.4564	0.00065649	450.753646535389	75.149	0.46561	76.931	76.73	77.196	1.7817					42	14	4	0	0	0	2.3239	1	31445	31445		0.79363	0.79363	1	12890000	+		21240	13597	10465	10504	24315	24315					0.040128358646711604
LVKPPRPQH	9	Unmodified	_LVKPPRPQH_					0	0	0			REV__AluSq2_dup31738|chrX:40110728-40111012:-|1.3544955157046434|0.0546003177932892|4.63|429.0|23|3|anti-sense	REV__AluSq2_dup31738|chrX:40110728-40111012:-|1.3544955157046434|0.0546003177932892|4.63|429.0|23|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.7895385622978	2	536.324725	1070.6349	2.3503	0.0012605	-0.90542	-0.0004856	1.4449	0.00077495	536.3265509711467	65.862	0.12546	67.261	67.184	67.31	1.3989					6	3	2	0	0	0	0.11463	1	27602	27602		7.9102	0	1	268170	+		21241	8110	10466	10505	24316	24316					0.10240550562321005
LVKRFIPKFI	10	Unmodified	_LVKRFIPKFI_					0	0	0		ENST00000343105.9_1_2:191381046-191390059:-|nuORF	ENST00000343105.9_1_2:191381046-191390059:-|nuORF	ENST00000343105.9_1_2:191381046-191390059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	420.9453918337822	3	420.944543	1259.8118	1.9055	0.00080212	0.24013	0.00010108	2.1457	0.0009032	420.9445186241623	46.661	0.26811	48.632	48.503	48.771	1.9703					14	8	2	0	0	0	0.85617	1	19556	19556		6.1918	2.0023	1	632020			21242	5946	10467	10506	24317	24317					0.19228586392614488
LVKSKELYIE	10	Unmodified	_LVKSKELYIE_					0	0	0		tr|A0A7D6W076|A0A7D6W076_9CLOTPutative3-methyladenineDNAglycosylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22345PE=3SV=1	tr|A0A7D6W076|A0A7D6W076_9CLOTPutative3-methyladenineDNAglycosylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22345PE=3SV=1	tr|A0A7D6W076|A0A7D6W076_9CLOTPutative3-methyladenineDNAglycosylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22345PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3567993044853	2	611.358096	1220.70164	1.8236	0.0011148	-2.3144	-0.0014149	-0.49082	-0.00030007	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.85124	1	32725	32725		6.7232	0	1	5176900			21243	17010	10468	10507	24318	24318					0.10011696542892423
LVKVEVISRRP	11	Unmodified	_LVKVEVISRRP_					0	0	0			REV__ENSG00000174705|ENST00000311601|SH3PXD2B	REV__ENSG00000174705|ENST00000311601|SH3PXD2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.7075988650322	4	324.709403	1294.8085	-1.9363	-0.00062875	-1.3877	-0.0004506	-3.324	-0.0010793	324.70862342540585	45.28	0.75286	45.28	44.872	45.625	0					44	23	2	0	0	0	1.0372	1	18944	18944		1.0136	0.051299	1	2491500	+		21244	11130	10469	10508	24319	24319					0.17289291547899666
LVKVIDRILY	10	Unmodified	_LVKVIDRILY_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MSMS	GG20161007_CRH_Patient100_A02_01	1	411.2637512087822	3	411.263941	1230.76999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.887	1	77.887	77.387	78.387	0								0	0	0	0.66161	1	32425	32425		1.7423	0.41263	1				21245	1926	10470	10509	24320	24320					0.16383985913421384
LVLCTMLASL	10	Carbamidomethyl (C),Oxidation (M)	_LVLC(Carbamidomethyl (C))TM(Oxidation (M))LASL_	LVLC(1)TMLASL	LVLCTM(1)LASL	LVLC(46)TMLASL	LVLCTM(46)LASL	0	1	1			REV__chrX:118419411-118432781|190|10.3|0.42|4.6|+|1|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|14	REV__chrX:118419411-118432781|190|10.3|0.42|4.6|+|1|TE_info:L1PB1,L1PB1_dup8380,L1,LINE,donor,-,118415804,118419411|None,WDR44|14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8066894412041	2	568.806328	1135.5981	1.6771	0.00095396	3.0846	0.0017545	4.7617	0.0027085	568.8079959273359	67.165	0.74335	67.487	67.062	67.805	0.32269					60	24	4	0	0	0	0.22411	1	28064	28064		46.021	9.8939	1	22428000	+		21246	8352	10471	10510	24321	24321	13	115			0.035727498392134294
LVLEILYML	9	Unmodified	_LVLEILYML_					0	0	0		ENSG00000146263|ENST00000683635|MMS22L;ENST00000506256.5_1_6:97707503-97720651:-|nuORF;ENST00000511335.5_1_6:97715738-97720957:-|nuORF;ENST00000509383.5_1_6:97679279-97717985:-|nuORF;ENST00000508976.5_1_6:97702357-97730353:-|nuORF	ENSG00000146263|ENST00000683635|MMS22L	ENSG00000146263|ENST00000683635|MMS22L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8304931521416	2	553.830129	1105.6457	1.2785	0.00070807	0.60776	0.0003366	1.8863	0.0010447	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.66839	1	30439	30439		8.5933	0	1	6275300			21247	3143	10472	10511	24322	24322					0.09710772101743714
LVLHILSLLV	10	Unmodified	_LVLHILSLLV_					0	0	0			REV__OR2A7|p.Q226Rfs*21|1|0.07|ENSG00000243896|chr7:144258953-144258953|G/-|frameshift_variant	REV__OR2A7|p.Q226Rfs*21|1|0.07|ENSG00000243896|chr7:144258953-144258953|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3816406130791	2	560.378635	1118.74272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.61	1	106.77	106.27	107.27	0.16174								0	0	0	0.66237	1	45636	45636		0.45834	0.45834	1		+		21248	11300	10473	10512	24323	24323					0.18809502373028408
LVLHLLSIV	9	Unmodified	_LVLHLLSIV_					0	0	0			REV__ENSG00000157911|ENST00000447513|PEX10	REV__ENSG00000157911|ENST00000447513|PEX10	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2282287478447	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.364	1	27.636	27.136	28.136	0.27119								0	0	0	0.42693	1	11441	11441		0.26902	0	1		+		21249	10542	10474	10513	24324	24324					0.15604971276138713
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2597534060478	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.716	1	92.716	92.216	93.216	0								0	0	0	0.42693	1	38749	38749		0.23584	0.076522	1		+		21250	10008	10475	10514	24325	24325					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2612792849541	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.656	1	93.656	93.156	94.156	0								0	0	0	0.42693	1	39141	39141		0.23584	0.076522	1		+		21251	10008	10475	10514	24326	24326					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2605163455009	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.846	1	93.846	93.346	94.346	0								0	0	0	0.42693	1	39219	39219		0.23584	0.076522	1		+		21252	10008	10475	10514	24327	24327					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2621642947197	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.455	1	93.623	93.123	94.123	0.16835								0	0	0	0.42693	1	39122	39122		0.23584	0.076522	1		+		21253	10008	10475	10514	24328	24328					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2627746462822	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.13	1	100.2	99.698	100.7	0.072716								0	0	0	0.42693	1	41921	41921		0.23584	0.076522	1		+		21254	10008	10475	10514	24329	24329					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2606994509697	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.361	1	94.233	93.733	94.733	0.87176								0	0	0	0.42693	1	39292	39292		0.23584	0.076522	1		+		21255	10008	10475	10514	24330	24330					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2611266970634	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.826	1	92.192	91.692	92.692	1.366								0	0	0	0.42693	1	38249	38249		0.23584	0.028987	1		+		21256	10008	10475	10514	24331	24331					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2609741091728	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.014	1	92.38	91.88	92.88	1.366								0	0	0	0.42693	1	38327	38327		0.23584	0	1		+		21257	10008	10475	10514	24332	24332					0.1716301236454001
LVLHRKHKR	9	Unmodified	_LVLHRKHKR_					0	0	0			REV__nc|ENSG00000137033|O95760-2|IL33	REV__nc|ENSG00000137033|O95760-2|IL33	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2604247927666	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.24	1	92.606	92.106	93.106	1.366								0	0	0	0.42693	1	38419	38419		0.23584	0.076522	1		+		21258	10008	10475	10514	24333	24333					0.1716301236454001
LVLIHILW	8	Unmodified	_LVLIHILW_					0	0	0		ENST00000466502.1_1_3:142300490-142300658:+|nuORF	ENST00000466502.1_1_3:142300490-142300658:+|nuORF	ENST00000466502.1_1_3:142300490-142300658:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.2193176150322	3	336.219784	1005.63752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.183	1	64.183	63.683	64.683	0								0	0	0	1.0178	1	26759	26759		0.45834	0	1				21259	6707	10476	10515	24334	24334					0.13493005967268346
LVLIVIKIF	9	Unmodified	_LVLIVIKIF_					0	0	0			REV__ENST00000397885.2_1_9:2837287-2844066:-|nuORF	REV__ENST00000397885.2_1_9:2837287-2844066:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.3751708865166	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.75	1	117.91	117.41	118.41	0.15606								0	0	0	0.42693	1	50853	50853		0	0	1		+		21260	12868	10477	10516	24335	24335					0.20499305349676433
LVLKEGKVSF	10	Unmodified	_LVLKEGKVSF_					0	0	0		tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3441650271416	2	560.342249	1118.66995	4.6953	0.002631	-0.69942	-0.00039191	3.9959	0.0022391	560.3416902405552	87.544	0.59129	88.635	88.335	88.926	1.0918					62	18	5	0	0	0	0.846	2	36848	36848;36897		7.2892	2.5332	1	40715000			21261	16534	10478	10517	24336;24337	24336					0.11535748579603933
LVLKEGKVSF	10	Unmodified	_LVLKEGKVSF_					0	0	0		tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3441039919853	2	560.342249	1118.66995	4.6478	0.0026044	-2.1283	-0.0011926	2.5196	0.0014118	560.3408691028393	87.254	0.55872	88.749	88.456	89.015	1.4953					60	17	5	0	0	0	0.80568	1	36707	36707		11.64	4.3511	1	27629000			21262	16534	10478	10517	24338	24338					0.11535748579603933
LVLKEGKVSF	10	Unmodified	_LVLKEGKVSF_					0	0	0		tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	tr|A0A553SQW9|A0A553SQW9_NIACIDNAtopoisomeraseOS=NialliacirculansOX=1397GN=CEQ21_07405PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	560.342249	1118.66995	2.53	0.0014177	-0.9722	-0.00054476	1.5578	0.00087289	560.3415504621547	88.227	0.5611	88.461	88.228	88.789	0.23471	-0.09584	0.00050003	NaN	11.64	68	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57751000			21263	16534	10478	10517							0.11535748579603933
LVLKLLVDS	9	Unmodified	_LVLKLLVDS_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3264953494072	2	500.326068	998.637583	1.1212	0.00056094	1.2311	0.00061594	2.3522	0.0011769	500.32655078019866	107.66	0.33857	107.66	107.45	107.79	0					57	17	6	0	0	0	0.83213	1	46167	46167		2.0598	0	1	452580000	+		21264	9956	10479	10518	24339	24339					0.1382096117662286
LVLKLLVDS	9	Unmodified	_LVLKLLVDS_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	500.326068	998.637583	1.1212	0.00056094	1.2311	0.00061594	2.3522	0.0011769	500.32655078019866	107.66	0.33857	107.66	107.45	107.79	0	-0.042746	0.0014915	NaN	2.0598	57	17	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	452580000	+		21265	9956	10479	10518							0.1382096117662286
LVLKWYVVAM	10	Unmodified	_LVLKWYVVAM_					0	0	0			REV__DCUN1D2|p.A180V|1|0.42|ENSG00000150401|chr13:113461118-113461118|G/A|missense_variant	REV__DCUN1D2|p.A180V|1|0.42|ENSG00000150401|chr13:113461118-113461118|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3590576052666	2	611.356845	1220.69914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.71	1	80.961	80.461	81.461	1.2512								0	0	0	0.66166	1	33457	33457		1.6526	0.17072	1		+		21266	8427	10480	10519	24340	24340					0.09761569604233955
LVLLHDFPEF	10	Unmodified	_LVLLHDFPEF_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.3326904177666	2	615.331882	1228.64921	0.82278	0.00050628	1.441	0.00088669	2.2638	0.001393	615.3326535841131	70.753	0.36047	72.591	72.411	72.772	1.8378					26	11	3	0	0	0	0.80568	1	29675	29675		11.64	0.81637	1	3183000			21267	2249	10481	10520	24341	24341					0.04403158199920654
LVLLHDFPEF	10	Unmodified	_LVLLHDFPEF_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	615.331882	1228.64921	1.78	0.0010953	0.36228	0.00022292	2.1423	0.0013182	615.3319626145195	72.242	0.3812	72.567	72.355	72.737	0.32494	-0.010018	1.2267E-05	NaN	11.64	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1184300			21268	2249	10481	10520							0.04403158199920654
LVLLHRVHP	9	Unmodified	_LVLLHRVHP_					0	0	0			REV__NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	REV__NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	542.3060180544853	2	542.342918	1082.67128	1.9495	0.0010573	0.67307	0.00036504	2.6225	0.0014223	542.3431383144573	72.38	0.15477	72.705	72.643	72.797	0.32494					6	4	2	0	0	0	0.10591	1	30274	30274		12.532	3.7861	1	216580	+		21269	9387	10482	10521	24342	24342					0.13325427459017192
LVLLHRVHP	9	Unmodified	_LVLLHRVHP_					0	0	0			REV__NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	REV__NUP155|p.W1314Gfs*4|1|0.1|ENSG00000113569|chr5:37292977-37292977|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	542.342918	1082.67128	0.96963	0.00052587	0.16556	8.9791E-05	1.1352	0.00061566	542.8434587261958	70.75	0.29955	72.588	72.472	72.772	1.8378	-0.058477	-0.0003235	NaN	12.532	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593000	+		21270	9387	10482	10521							0.13325427459017192
LVLLLTKAKK	10	Unmodified	_LVLLLTKAKK_					0	0	0			REV__SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	REV__SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2700683474541	3	376.268915	1125.78492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.139	1	64.139	63.639	64.639	0								0	0	0	0.66254	1	26741	26741		0.15932	0	1		+		21271	10407	10483	10522	24343	24343					0.22705477781391892
LVLLRRALVR	10	Unmodified	_LVLLRRALVR_					0	0	0			REV__chr14:94062621-94065779|133|19.53|0.06|8.3|-|1|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|113	REV__chr14:94062621-94065779|133|19.53|0.06|8.3|-|1|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|113	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9159423708916	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.561	1	14.287	13.787	14.787	0.72639								0	0	0	0.6624	1	5631	5631		0.40072	0	1		+		21272	8261	10484	10523	24344	24344					0.228496228556196
LVLLWLPVLVR	11	Unmodified	_LVLLWLPVLVR_					0	0	0		ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	ENST00000367157.4_2_1:205290701-205290866:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9438354372978	2	660.941934	1319.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.247	1	82.247	81.747	82.747	0								0	0	0	0.63775	1	34263	34263		0.30703	0	1				21273	6059	10485	10524	24345	24345					0.22217428598150946
LVLPHLFTLW	10	Unmodified	_LVLPHLFTLW_					0	0	0			REV__ENST00000372067.7_1_6:43753147-43753534:+|nuORF	REV__ENST00000372067.7_1_6:43753147-43753534:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8705322146416	2	619.868434	1237.72232	2.3482	0.0014556	2.1843	0.001354	4.5325	0.0028095	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.89588	1	32880	32880		3.9444	3.9444	1	8928300	+		21274	12678	10486	10525	24346	24346					0.11296331713219843
LVLRVFWVY	9	Unmodified	_LVLRVFWVY_					0	0	0		L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|44|1|anti-sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|44|1|anti-sense	L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|44|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8590576052666	2	597.855327	1193.6961	2.5642	0.001533	2.2485	0.0013442	4.8126	0.0028772	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.75267	1	32571	32571		5.2307	0.90143	1	10594000			21275	7705	10487	10526	24347	24347					0.10700062541741318
LVLSSRLML	9	Unmodified	_LVLSSRLML_					0	0	0			REV__ENST00000450326.5_1_3:9470680-9476039:+|nuORF	REV__ENST00000450326.5_1_3:9470680-9476039:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3175536990166	2	516.31772	1030.62089	2.2411	0.0011571	-1.9815	-0.0010231	0.25966	0.00013407	516.3163082039417	48.535	0.37144	50.512	50.297	50.669	1.9772					26	11	4	0	0	0	0.066815	2	20315	20315;20358		61.357	1.9833	1	5603900	+		21276	13128	10488	10527	24348;24349	24348					0.10680137019016911
LVLSTLSG	8	Unmodified	_LVLSTLSG_					0	0	0		ENSG00000120158|ENST00000381750|RCL1;ENST00000442869.5_1_9:4793091-4833155:+|nuORF	ENSG00000120158|ENST00000381750|RCL1	ENSG00000120158|ENST00000381750|RCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.2385436892509	2	395.239461	788.46437	0.18555	7.3339E-05	1.2717	0.00050261	1.4572	0.00057595	395.23992556511075	18.592	0.637	20.04	19.698	20.335	1.448					35	20	3	0	0	0	0.87935	1	7755	7755		9.3474	0	1	1027500			21277	2096	10489	10528	24350	24350					0.061675951202118995
LVLVLVVVVKA	11	Unmodified	_LVLVLVVVVKA_					0	0	0			REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.4127075076103	2	576.409935	1150.80532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.88	1	108.88	108.38	109.38	0								0	0	0	0.63775	1	47003	47003		0.30703	0	1		+		21278	9235	10490	10529	24351	24351					0.23594648441235222
LVLVLVVVVKA	11	Unmodified	_LVLVLVVVVKA_					0	0	0			REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.4144164919853	2	576.409935	1150.80532	2.637	0.00152	3.0114	0.0017358	5.6484	0.0032558	576.4112574243585	108.62	0.98975	108.67	108.44	109.43	0.050644					81	47	2	0	0	0	1.0395	1	46633	46633		0.30703	0	1	63353000	+		21279	9235	10490	10529	24352	24352					0.23594648441235222
LVLVLVVVVKA	11	Unmodified	_LVLVLVVVVKA_					0	0	0			REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	REV__ENST00000488591.1_1_10:44876209-44880453:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	576.4136230349541	2	576.409935	1150.80532	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.86	1	108.02	107.52	108.52	0.15795								0	0	0	0.63775	1	46454	46454		0.30703	0	1		+		21280	9235	10490	10529	24353	24353					0.23594648441235222
LVLWTKWRL	9	Unmodified	_LVLWTKWRL_					0	0	0			REV__ENST00000344120.4_1_5:141690563-141690701:-|nuORF	REV__ENST00000344120.4_1_5:141690563-141690701:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.2115966677666	2	607.874051	1213.73355	1.9357	0.0011767	-2.4511	-0.0014899	-0.51535	-0.00031327	607.872909668755	40.092	0.18931	41.954	41.894	42.083	1.8624					9	5	2	0	0	0	0.11898	1	16789	16789		2.3027	0	1	333730	+		21281	12516	10491	10530	24354	24354					0.13523153807363997
LVMLKHLQVL	10	Unmodified	_LVMLKHLQVL_					0	0	0		nc|ENSG00000114248|Q6UY01-3|LRRC31;MECOM-LRRC31|1|fusion;nc|ENSG00000114248|Q6UY01-4|LRRC31;nc|ENSG00000114248|Q6UY01-2|LRRC31;ENSG00000114248|ENST00000316428|LRRC31	nc|ENSG00000114248|Q6UY01-3|LRRC31	nc|ENSG00000114248|Q6UY01-3|LRRC31	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.9204284548759	3	398.586138	1192.73659	1.423	0.0005672	-1.316	-0.00052453	0.10706	4.2672E-05	398.58558346475127	34.092	0.54549	34.389	34.085	34.63	0.29701					33	17	2	0	0	0	0.89588	1	14254	14254		1.9064	0.45126	1	2099500			21282	1853	10492	10531	24355	24355					0.14792660869852625
LVMLKKKQYT	10	Unmodified	_LVMLKKKQYT_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-11|APP	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	313.0686523318291	4	313.692793	1250.74206	0.66575	0.00020884	-0.71759	-0.0002251	-0.051837	-1.6261E-05	313.692148530793	34.313	0.31021	34.61	34.451	34.761	0.29701					23	10	3	0	0	0	0.1256	1	14396	14396		0.69767	0	1	539760			21283	2989	10493	10532	24356	24356					0.1267233966166259
LVMTLDDTK	9	Unmodified	_LVMTLDDTK_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.8508788943291	3	345.851209	1034.5318	-2.4759	-0.0008563	1.0394	0.00035948	-1.4365	-0.00049683	345.85157951877216	14.748	0.90115	14.748	14.503	15.405	0					85	28	4	0	0	0	0.26473	1	6097	6097		27.223	0.95509	1	4894200	+		21284	11696	10494	10533	24357	24357					0.01591257268796653
LVNEIFRL	8	Unmodified	_LVNEIFRL_					0	0	0		ENSG00000166896|ENST00000300145|ATP23	ENSG00000166896|ENST00000300145|ATP23	ENSG00000166896|ENST00000300145|ATP23	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1003.597705066204	1	1003.59349	1002.58622	1.5823	0.001588	-1.5316	-0.0015371	0.050721	5.0903E-05	1003.592158869752	96.273	0.083282	96.273	96.206	96.289	0					4	2	2	0	0	0	0.77833	1	40241	40241		23.148	0	1	1698600			21285	3932	10495	10534	24358	24358					0.08502637202559526
LVNELTEFAK	10	Unmodified	_LVNELTEFAK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3199951052666	2	582.318971	1162.62339	1.917	0.0011163	-0.018488	-1.0766E-05	1.8985	0.0011056	582.3189138581947	45.357	1.4229	45.357	45.059	46.482	0					118	44	5	0	0	0	0.046747	8	19046	18927;18968;19007;19046;19118;19170;19249;19357		114.19	56.464	1	38847000		+	21286	341	10496	10535	24359;24360;24361;24362;24363;24364;24365;24366	24362					0.04858263957657982
LVNELTEFAK	10	Unmodified	_LVNELTEFAK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.3202392458916	2	582.318971	1162.62339	1.6567	0.00096472	0.59788	0.00034816	2.2546	0.0013129	582.3193814670557	44.813	1.2341	45.14	44.66	45.894	0.32674					81	41	3	0	0	0	0.064585	3	18803	18755;18803;18851		114.19	56.464	1	15404000		+	21287	341	10496	10535	24367;24368;24369	24368					0.04858263957657982
LVNELTEFAK	10	Unmodified	_LVNELTEFAK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.3199340701103	2	582.318971	1162.62339	1.6514	0.00096164	-0.50144	-0.000292	1.15	0.00066964	582.8198894021411	45.319	0.70819	45.646	45.465	46.173	0.32674					34	23	2	0	0	0	0.80011	2	19082	18979;19082		12.241	4.3305	1	759860		+	21288	341	10496	10535	24370;24371	24371					0.04858263957657982
LVNELTEFAK	10	Unmodified	_LVNELTEFAK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8214599490166	2	582.318971	1162.62339	1.7573	0.0010233	0.0068904	4.0124E-06	1.7642	0.0010273	582.319311617079	43.427	0.75551	44.781	44.408	45.163	1.3536					56	24	4	0	0	0	0.065915	2	18192	18192;18237		103.82	42.222	1	11873000		+	21289	341	10496	10535	24372;24373	24372					0.04858263957657982
LVNELTEFAK	10	Unmodified	_LVNELTEFAK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3206054568291	2	582.318971	1162.62339	1.7976	0.0010468	-0.38667	-0.00022517	1.4109	0.00082161	582.3192375087617	42.793	1.5138	44.714	44.133	45.647	1.9211					81	49	3	0	0	0	0.057855	2	17971	17922;17971		114.19	43.854	1	8119300		+	21290	341	10496	10535	24374;24375	24375					0.04858263957657982
LVNIPQAIEVV	11	Unmodified	_LVNIPQAIEVV_					0	0	0		tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8569824099541	2	597.858264	1193.70197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.313	1	78.313	77.813	78.813	0								0	0	0	0.63775	1	32601	32601		1.1933	0.12188	1				21291	16238	10497	10536	24376	24376					0.11287116262747077
LVNIPQAIEVV	11	Unmodified	_LVNIPQAIEVV_					0	0	0		tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	tr|A0A553SJB8|A0A553SJB8_NIACI3-hexulose-6-phosphatesynthaseOS=NialliacirculansOX=1397GN=hxlAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8584472537041	2	597.858264	1193.70197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.434	1	78.434	77.934	78.934	0								0	0	0	0.63775	1	32650	32650		1.1933	0.12188	1				21292	16238	10497	10536	24377	24377					0.11287116262747077
LVNKPIAI	8	Unmodified	_LVNKPIAI_					0	0	0		tr|A0A553STL7|A0A553STL7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05370PE=3SV=1	tr|A0A553STL7|A0A553STL7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05370PE=3SV=1	tr|A0A553STL7|A0A553STL7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05370PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2883178591728	2	434.286746	866.558939	3.3077	0.0014365	-0.31374	-0.00013625	2.994	0.0013002	434.2866224479281	106.15	0.19926	106.31	106.23	106.43	0.15781					36	10	5	0	0	0	0.89178	1	45373	45373		0.69038	0	1	534400000			21293	16657	10498	10537	24378	24378					0.12032153662153178
LVNLVERNRIG	11	Unmodified	_LVNLVERNRIG_					0	0	0		nc|ENSG00000058056|Q92995-2|USP13;ENSG00000058056|ENST00000263966|USP13	nc|ENSG00000058056|Q92995-2|USP13	nc|ENSG00000058056|Q92995-2|USP13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8835937380791	2	641.883136	1281.75172	1.7643	0.0011325	-0.52536	-0.00033722	1.2389	0.00079523	641.8827940815319	80.063	0.91084	80.364	79.877	80.788	0.30047					64	28	3	0	0	0	1.0366	1	33426	33426		1.1933	0	1	1155100			21294	732	10499	10538	24379	24379					0.12211243991396259
LVNREPGSW	9	Unmodified	_LVNREPGSW_					0	0	0		ENST00000335195.10_1_7:44119305-44120425:-|nuORF	ENST00000335195.10_1_7:44119305-44120425:-|nuORF	ENST00000335195.10_1_7:44119305-44120425:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2775146365166	2	529.274898	1056.53524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.93	1	107.09	106.59	107.59	0.16174								0	0	0	0.42693	1	45832	45832		4.3292	2.0265	1				21295	5908	10500	10539	24380	24380					0.009236881576953238
LVNSYKIYI	9	Unmodified	_LVNSYKIYI_					0	0	0		PCDHB10|p.N318Y|1|0.06|ENSG00000120324|chr5:141193504-141193504|A/T|missense_variant	PCDHB10|p.N318Y|1|0.06|ENSG00000120324|chr5:141193504-141193504|A/T|missense_variant	PCDHB10|p.N318Y|1|0.06|ENSG00000120324|chr5:141193504-141193504|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8212768435478	2	556.82115	1111.62775	1.9824	0.0011038	0.62961	0.00035058	2.612	0.0014544	556.821282818025	78.257	0.30933	79.992	79.824	80.133	1.735					17	9	2	0	0	0	0.54523	1	32829	32829		13.508	4.1248	1	2623700			21296	8049	10501	10540	24381	24381					0.07639773171217712
LVPACIVVL	9	Unmodified	_LVPACIVVL_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	463.7926208376884	2	463.790807	925.56706	4.3502	0.0020176	-0.57459	-0.00026649	3.7756	0.0017511	463.7909031564856	91.147	0.41152	92.129	91.974	92.385	0.98157					23	12	3	0	0	0	0.16975	1	38408	38408		36.466	8.2929	1	970030			21297	777	10502	10541	24382	24382					0.10129964587315499
LVPACIVVL	9	Unmodified	_LVPACIVVL_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	463.790807	925.56706	4.0353	0.0018715	-0.43022	-0.00019953	3.6051	0.001672	463.7907997247736	90.732	0.41624	92.098	91.864	92.28	1.366	-0.015473	6.8718E-05	NaN	36.466	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1037500			21298	777	10502	10541							0.10129964587315499
LVPARVPVHL	10	Unmodified	_LVPARVPVHL_					0	0	0		chr5:177337250-177337504|202|24.11|0.02|10.6|-|2|LMAN2,None|1	chr5:177337250-177337504|202|24.11|0.02|10.6|-|2|LMAN2,None|1	chr5:177337250-177337504|202|24.11|0.02|10.6|-|2|LMAN2,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2189208865166	2	550.850576	1099.6866	3.0243	0.0016659	0.49553	0.00027296	3.5198	0.0019389	550.8509121384801	60.633	0.18752	62.053	61.933	62.121	1.4196					9	5	2	0	0	0	0.12513	1	25384	25384		4.3292	2.0265	1	475650			21299	268	10503	10542	24383	24383					0.14074294256238318
LVPFMRRGNK	10	Unmodified	_LVPFMRRGNK_					0	0	0			REV__nc|ENSG00000164458|O15178-2|TBXT	REV__nc|ENSG00000164458|O15178-2|TBXT	MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3494140505791	2	609.350417	1216.68628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.86	1	96.281	95.781	96.781	0.4212								0	0	0	0.61972	1	40339	40339		20.454	2.3073	1		+		21300	10197	10504	10543	24384	24384					0.0866055126473384
LVPIMLLFLL	10	Unmodified	_LVPIMLLFLL_					0	0	0		ENST00000379565.7_1_X:20173340-20173514:-|nuORF	ENST00000379565.7_1_X:20173340-20173514:-|nuORF	ENST00000379565.7_1_X:20173340-20173514:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843505740166	3	391.255618	1170.74502	1.6314	0.00063831	1.3405	0.00052447	2.9719	0.0011628	391.25701931319213	39.875	0.15396	41.737	41.677	41.831	1.8624					6	4	2	0	0	0	0.12559	1	16717	16717		0.77653	0	1	753810			21301	6214	10505	10544	24385	24385					0.16648214786505378
LVPLFPLFRVF	11	Unmodified	_LVPLFPLFRVF_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|84|3|anti-sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|84|3|anti-sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|84|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9449951052666	3	449.944431	1346.81146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.619	1	76.925	76.425	77.425	1.3063								0	0	0	0.63773	1	31739	31739		8.4443	0.49891	1				21302	7796	10506	10545	24386	24386					0.15193166672725056
LVPPLMKPI	9	Unmodified	_LVPPLMKPI_					0	0	0		ENSG00000205496|ENST00000380371|OR51A2	ENSG00000205496|ENST00000380371|OR51A2	ENSG00000205496|ENST00000380371|OR51A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.3210632205009	2	504.319731	1006.62491	1.8665	0.00094132	0.38291	0.00019311	2.2494	0.0011344	504.3199878014486	73.7	0.46253	73.7	73.521	73.983	0					27	14	3	0	0	0	0.75267	1	30731	30731		5.2307	0	1	1197400			21303	5183	10507	10546	24387	24387					0.12186226512721987
LVQAFQFTDK	10	Unmodified	_LVQAFQFTDK_					0	0	0		ENSG00000117450|ENST00000319248|PRDX1;ENST00000449329.2_1_9:12972844-12973225:-|nuORF	ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8196288943291	2	598.819138	1195.62372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.608	1	41.918	41.418	42.418	1.3102								0	0	0	0.65926	1	17031	17031		5.7319	1.4026	1				21304	2010	10508	10547	24388	24388					0.03373683677500594
LVQIIKNLL	9	Unmodified	_LVQIIKNLL_					0	0	0			REV__ENSG00000019485|ENST00000683152|PRDM11	REV__ENSG00000019485|ENST00000683152|PRDM11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.3160888552666	2	527.35516	1052.69577	3.5184	0.0018554	-2.7288	-0.001439	0.78957	0.00041638	527.855200677156	91.218	0.33972	92.584	92.406	92.746	1.366					18	10	2	0	0	0	0.11333	1	38349	38349		13.508	0	1	521830	+		21305	8553	10509	10548	24389	24389					0.17152642821906738
LVQIIKNLL	9	Unmodified	_LVQIIKNLL_					0	0	0			REV__ENSG00000019485|ENST00000683152|PRDM11	REV__ENSG00000019485|ENST00000683152|PRDM11	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.35516	1052.69577	4.17	0.0021991	-4.5225	-0.002385	-0.35244	-0.00018586	527.3526417357126	91.707	0.30125	92.643	92.498	92.8	0.93623	0.02947	-0.00081182	NaN	13.508	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	693050	+		21306	8553	10509	10548							0.17152642821906738
LVQLVPPVKQK	11	Unmodified	_LVQLVPPVKQK_					0	0	0			REV__ENST00000505081.5_1_5:176938794-176940626:-|nuORF	REV__ENST00000505081.5_1_5:176938794-176940626:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.9402648806572	3	416.939458	1247.79654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.62	1	38.437	37.937	38.937	1.8176								0	0	0	0.63775	1	15363	15363		1.4551	0.24029	1		+		21307	11383	10510	10549	24390	24390					0.18255674804709088
LVQSLPCEKAL	11	Unmodified	_LVQSLPCEKAL_					0	0	0			REV__ENST00000482788.1_1_3:18456578-18457590:-|nuORF	REV__ENST00000482788.1_1_3:18456578-18457590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8354980349541	2	600.836474	1199.65839	3.3485	0.0020119	-2.5952	-0.0015593	0.75329	0.0004526	600.835038203029	74.413	0.26789	75.731	75.591	75.859	1.318					15	8	2	0	0	0	0.54522	1	31224	31224		22.736	0.078198	1	1399300	+		21308	13373	10511	10550	24391	24391					0.06655183493967343
LVQSLPCEKAL	11	Unmodified	_LVQSLPCEKAL_					0	0	0			REV__ENST00000482788.1_1_3:18456578-18457590:-|nuORF	REV__ENST00000482788.1_1_3:18456578-18457590:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	600.836474	1199.65839	3.3485	0.0020119	-2.5952	-0.0015593	0.75329	0.0004526	600.835038203029	74.413	0.26789	75.731	75.591	75.859	1.318	-0.011229	0.0011631	NaN	22.736	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1399300	+		21309	13373	10511	10550							0.06655183493967343
LVRARYDI	8	Unmodified	_LVRARYDI_					0	0	0			REV__ENST00000534639.1_1_11:43284362-43284860:-|nuORF	REV__ENST00000534639.1_1_11:43284362-43284860:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	503.2964965701103	2	503.295633	1004.57671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.004	1	66.004	65.504	66.504	0								0	0	0	1.0178	1	27501	27501		10.183	1.5901	1		+		21310	13732	10512	10551	24392	24392					0.0746086891701907
LVRARYDI	8	Unmodified	_LVRARYDI_					0	0	0			REV__ENST00000534639.1_1_11:43284362-43284860:-|nuORF	REV__ENST00000534639.1_1_11:43284362-43284860:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.2963744997978	2	503.295633	1004.57671	2.3945	0.0012051	-1.5676	-0.00078898	0.82682	0.00041614	503.2948563124969	65.553	0.66679	65.88	65.356	66.023	0.32689					23	20	2	0	0	0	0.87803	1	27456	27456		10.183	0	1	1296200	+		21311	13732	10512	10551	24393	24393					0.0746086891701907
LVRCVFKR	8	Unmodified	_LVRCVFKR_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.3110229372978	2	510.810396	1019.60624	2.2465	0.0011475	1.3429	0.00068598	3.5894	0.0018335	510.81108618138325	66.486	0.43117	67.875	67.626	68.057	1.3887					22	13	2	0	0	0	2.3239	1	27931	27931		2.5775	0.27475	1	1400800			21312	7630	10513	10552	24394	24394					0.09722109661527156
LVRCVFKR	8	Unmodified	_LVRCVFKR_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|225|1|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	510.810396	1019.60624	2.0596	0.0010521	1.0766	0.00054993	3.1362	0.001602	510.81113794707977	66.008	0.49895	67.916	67.735	68.234	1.9085	0.020966	-0.00016894	NaN	2.5775	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1420900			21313	7630	10513	10552							0.09722109661527156
LVRFFKGC	8	Unmodified	_LVRFFKGC_					0	0	0		tr|A0A7D6VQ64|A0A7D6VQ64_9CLOTserine-typeD-Ala-D-AlacarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14395PE=3SV=1	tr|A0A7D6VQ64|A0A7D6VQ64_9CLOTserine-typeD-Ala-D-AlacarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14395PE=3SV=1	tr|A0A7D6VQ64|A0A7D6VQ64_9CLOTserine-typeD-Ala-D-AlacarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14395PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2713500857353	2	485.270573	968.526593	1.2659	0.0006143	0.60642	0.00029428	1.8723	0.00090858	485.2709768104916	100.82	0.52121	100.82	100.41	100.94	0					23	16	3	0	0	0	0.89176	1	42219	42219		0.79363	0	1	4792600			21314	16784	10514	10553	24395	24395					0.04107042987538989
LVRGAPRR	8	Unmodified	_LVRGAPRR_					0	0	0			REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8650085330009	3	308.866515	923.577717	-2.5814	-0.00079729	-1.9756	-0.00061018	-4.5569	-0.0014075	308.8654497162047	33.734	0.74103	33.734	33.39	34.131	0					52	23	3	0	0	0	0.88896	1	14138	14138		3.2813	0	1	2695500	+		21315	13159	10515	10554	24396	24396					0.11287128076605768
LVRGAPRR	8	Unmodified	_LVRGAPRR_					0	0	0			REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	308.866515	923.577717	-2.5814	-0.00079729	-1.9756	-0.00061018	-4.5569	-0.0014075	308.8654497162047	33.734	0.74103	33.734	33.39	34.131	0	0.3452	0.0011151	NaN	3.2813	52	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2695500	+		21316	13159	10515	10554							0.11287128076605768
LVRGAPRR	8	Unmodified	_LVRGAPRR_					0	0	0			REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	308.866515	923.577717	0.60197	0.00018593	-3.1824	-0.00098293	-2.5804	-0.000797	308.86474242078737	33.075	0.74099	33.369	33.078	33.819	0.29431	-0.019416	-3.1865E-06	NaN	3.2813	51	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1710500	+		21317	13159	10515	10554							0.11287128076605768
LVRGAPRR	8	Unmodified	_LVRGAPRR_					0	0	0			REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	308.866515	923.577717	-0.61597	-0.00019025	-4.2036	-0.0012983	-4.8195	-0.0014886	308.8646770475588	31.951	0.63821	33.233	32.895	33.534	1.2813	-0.1561	-0.00094942	NaN	3.2813	37	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1830300	+		21318	13159	10515	10554							0.11287128076605768
LVRGAPRR	8	Unmodified	_LVRGAPRR_					0	0	0			REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	REV__ENST00000455245.1_1_9:68413859-68413937:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	308.866515	923.577717	0.17748	5.4818E-05	-3.9158	-0.0012094	-3.7383	-0.0011546	308.8645406308391	31.395	0.66791	33.219	32.803	33.47	1.8246	-0.16968	-0.00068273	NaN	3.2813	42	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2393400	+		21319	13159	10515	10554							0.11287128076605768
LVRGMHLGV	9	Unmodified	_LVRGMHLGV_					0	0	0			REV__ADCY1|p.T401M|1|0.15|ENSG00000164742|chr7:45657780-45657780|C/T|missense_variant	REV__ADCY1|p.T401M|1|0.15|ENSG00000164742|chr7:45657780-45657780|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2881042361259	2	491.286754	980.558955	3.3761	0.0016586	-0.3819	-0.00018762	2.9942	0.001471	491.2861305847926	97.627	0.15258	97.883	97.785	97.937	0.25636					10	5	2	0	0	0	0.77526	1	41093	41093		4.3292	0.38484	1	6310200	+		21320	8083	10516	10555	24397	24397					0.06789830390528095
LVRGMHLGV	9	Unmodified	_LVRGMHLGV_					0	0	0			REV__ADCY1|p.T401M|1|0.15|ENSG00000164742|chr7:45657780-45657780|C/T|missense_variant	REV__ADCY1|p.T401M|1|0.15|ENSG00000164742|chr7:45657780-45657780|C/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.286754	980.558955	3.3761	0.0016586	-0.3819	-0.00018762	2.9942	0.001471	491.2861305847926	97.627	0.15258	97.883	97.785	97.937	0.25636	0.036213	-0.0017547	NaN	4.3292	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6310200	+		21321	8083	10516	10555							0.06789830390528095
LVRKREHR	8	Unmodified	_LVRKREHR_					0	0	0			REV__nc|ENSG00000184281|Q9Y5U2-2|TSSC4	REV__nc|ENSG00000184281|Q9Y5U2-2|TSSC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3398925662041	2	547.338698	1092.66284	3.2379	0.0017722	0.59297	0.00032455	3.8309	0.0020968	547.3389011085233	92.999	0.34917	94.276	94.038	94.388	1.277					17	10	2	0	0	0	0.88958	1	39157	39157		2.8892	0	1	679300	+		21322	11418	10517	10556	24398	24398					0.12021873542403227
LVRLLLLVL	9	Unmodified	_LVRLLLLVL_					0	0	0		ENSG00000129538|ENST00000397967|RNASE1;RNASE1|p.S50Kfs*7|1|0.04|ENSG00000129538|chr14:20801920-20801921|-/CGTT|frameshift_variant	ENSG00000129538|ENST00000397967|RNASE1	ENSG00000129538|ENST00000397967|RNASE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3851196169853	2	526.38372	1050.75289	4.3251	0.0022767	-0.26817	-0.00014116	4.0569	0.0021355	526.3835546110593	89.542	3.3235	90.947	90.552	93.876	1.4045					227	104	4	0	0	0	0.13873	1	38408	38408		39.957	0	1	7524900			21323	2407	10518	10557	24399	24399					0.22954110098248748
LVRPALVLA	9	Unmodified	_LVRPALVLA_					0	0	0			REV__ENSG00000049449|ENST00000054950|RCN1	REV__ENSG00000049449|ENST00000054950|RCN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.3222839236259	2	476.32112	950.627687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.44	1	104.62	104.12	105.12	0.1731								0	0	0	0.42693	1	44188	44188		0.6015	0	1		+		21324	8617	10519	10558	24400	24400					0.15039817961871904
LVRPRLHIKKM	11	Unmodified	_LVRPRLHIKKM_					0	0	0			REV__HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|51|3|sense	REV__HERVH-int_dup2924|chr7:120779458-120782483:-|3.6914275035513295|0.0201601709888603|7.52|415.0|51|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.7272521853447	4	348.476146	1389.87548	0.32226	0.0001123	-0.20038	-6.9827E-05	0.12189	4.2474E-05	348.4760079941895	29.243	1.058	31.042	30.206	31.264	1.7987					97	34	4	0	0	0	1.039	1	12051	12051		0.45452	0.31463	1	4132000	+		21325	14189	10520	10559	24401	24401					0.1961362355800702
LVRQAVKQLFF	11	Unmodified	_LVRQAVKQLFF_					0	0	0		ENSG00000128833|ENST00000261839|MYO5C	ENSG00000128833|ENST00000261839|MYO5C	ENSG00000128833|ENST00000261839|MYO5C	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2760192751884	3	450.27484	1347.80269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.059	1	76.841	76.341	77.341	1.7817								0	0	0	0.63774	1	31484	31484		7.9454	6.4903	1				21326	2385	10521	10560	24402	24402					0.14270193036236378
LVRQLAQFRQR	11	Unmodified	_LVRQLAQFRQR_					0	0	0		nc|ENSG00000127914|Q99996-4|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	nc|ENSG00000127914|Q99996-4|AKAP9	nc|ENSG00000127914|Q99996-4|AKAP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2750427126884	3	472.28451	1413.8317	3.7175	0.0017557	-2.1972	-0.0010377	1.5203	0.00071802	472.2834594253891	86.491	0.75181	87.618	87.462	88.214	1.1265					52	27	3	0	0	0	1.0357	1	36380	36380		1.4551	0.94916	1	4213400			21327	6927	10522	10561	24403	24403					0.14133730385242416
LVRQLAQFRQR	11	Unmodified	_LVRQLAQFRQR_					0	0	0		nc|ENSG00000127914|Q99996-4|AKAP9;ENST00000493453.1_1_7:91570251-91670224:+|nuORF;nc|ENSG00000127914|Q99996-5|AKAP9;nc|ENSG00000127914|Q99996-1|AKAP9;nc|ENSG00000127914|Q99996-6|AKAP9	nc|ENSG00000127914|Q99996-4|AKAP9	nc|ENSG00000127914|Q99996-4|AKAP9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	472.28451	1413.8317	4.2722	0.0020177	-3.6171	-0.0017083	0.65506	0.00030938	472.2828208833759	86.066	0.49659	87.613	87.512	88.008	1.547	0.17402	-0.0010626	NaN	1.4551	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5622800			21328	6927	10522	10561							0.14133730385242416
LVRRGSHRI	9	Unmodified	_LVRRGSHRI_					0	0	0		ENST00000493035.5_1_2:172864861-172928621:+|nuORF;ENSG00000172878|ENST00000315796|METAP1D	ENST00000493035.5_1_2:172864861-172928621:+|nuORF	ENST00000493035.5_1_2:172864861-172928621:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3399536013603	2	547.338698	1092.66284	3.9644	0.0021699	0.78134	0.00042766	4.7457	0.0025975	547.3387569621959	93.338	0.22672	94.21	94.064	94.29	0.87176					11	6	2	0	0	0	0.75267	1	39282	39282		5.2307	0	1	726060			21329	4258	10523	10562	24404	24404					0.12021873542403227
LVRRGSHRI	9	Unmodified	_LVRRGSHRI_					0	0	0		ENST00000493035.5_1_2:172864861-172928621:+|nuORF;ENSG00000172878|ENST00000315796|METAP1D	ENST00000493035.5_1_2:172864861-172928621:+|nuORF	ENST00000493035.5_1_2:172864861-172928621:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	547.338698	1092.66284	3.2379	0.0017722	0.59297	0.00032455	3.8309	0.0020968	547.3389011085233	92.999	0.34917	94.276	94.038	94.388	1.277	0.062437	0.00030763	NaN	5.2307	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	679300			21330	4258	10523	10562							0.12021873542403227
LVRSELEAI	9	Unmodified	_LVRSELEAI_					0	0	0			REV__nc|ENSG00000148290|Q15526-2|SURF1	REV__nc|ENSG00000148290|Q15526-2|SURF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3013793826103	2	515.300581	1028.58661	2.512	0.0012944	-0.36514	-0.00018816	2.1469	0.0011063	515.3006741014718	45.362	0.35684	46.728	46.53	46.887	1.3653					26	10	3	0	0	0	0.22154	1	18977	18977		30.637	0	1	3483100	+		21331	10339	10524	10563	24405	24405					0.07346012131756652
LVRSELEAI	9	Unmodified	_LVRSELEAI_					0	0	0			REV__nc|ENSG00000148290|Q15526-2|SURF1	REV__nc|ENSG00000148290|Q15526-2|SURF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3022949099541	2	515.300581	1028.58661	2.1741	0.0011203	0.51851	0.00026719	2.6926	0.0013875	515.3008952978672	44.826	0.38382	46.786	46.576	46.96	1.9596					24	11	3	0	0	0	0.32838	1	18763	18763		24.021	2.2739	1	3261700	+		21332	10339	10524	10563	24406	24406					0.07346012131756652
LVRYFRFL	8	Unmodified	_LVRYFRFL_					0	0	0			REV__nc|ENSG00000153551|Q96FZ5-2|CMTM7	REV__nc|ENSG00000153551|Q96FZ5-2|CMTM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3354980349541	2	557.332019	1112.64948	2.7684	0.0015429	-0.86229	-0.00048058	1.9061	0.0010623	557.8309461758337	84.955	0.44376	86.552	86.188	86.632	1.5962					34	15	3	0	0	0	0.88409	1	35545	35545		6.3541	1.1234	1	5830000	+		21333	10455	10525	10564	24407	24407					0.0976662271045825
LVSAVLVLTL	10	Unmodified	_LVSAVLVLTL_					0	0	0			REV__ENSG00000116031|ENST00000410009|CD207	REV__ENSG00000116031|ENST00000410009|CD207	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.2965576052666	2	514.341718	1026.66888	2.8977	0.0014904	-0.7018	-0.00036096	2.1959	0.0011294	514.340746785213	60.113	0.29777	61.533	61.421	61.718	1.4196					15	9	2	0	0	0	0.12412	1	25269	25269		20.454	0	1	1060500	+		21334	9464	10526	10565	24408	24408					0.15661534210698846
LVSESSDVLPK	11	Unmodified	_LVSESSDVLPK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000425226.1_1_2:203705056-203705395:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.3213989138603	2	587.321711	1172.62887	1.2845	0.00075442	-1.6368	-0.00096135	-0.35232	-0.00020693	587.3208373274003	25.854	0.64825	27.113	26.649	27.297	1.2594					52	20	4	0	0	0	0.0041895	3	10837	10739;10785;10837		114.5	58.994	1	5809200		+	21335	343	10527	10566	24409;24410;24411	24411					0.049459427494639385
LVSESSDVLPK	11	Unmodified	_LVSESSDVLPK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000489121.1_1_3:137820322-137820643:-|nuORF;ENST00000425226.1_1_2:203705056-203705395:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.3209106326103	2	587.321711	1172.62887	0.61562	0.00036157	-0.77373	-0.00045443	-0.15811	-9.2864E-05	587.3212129078028	25.481	0.64132	27.198	26.727	27.368	1.7167					49	20	3	0	0	0	0.026998	4	10632	10533;10583;10632;10687		88.364	38.809	1	6815600		+	21336	343	10527	10566	24412;24413;24414;24415	24414					0.049459427494639385
LVSLEMSEI	9	Unmodified	_LVSLEMSEI_					0	0	0		nc|ENSG00000127980|O43933-2|PEX1;ENST00000484913.5_1_7:92116773-92148321:-|nuORF;ENSG00000127980|ENST00000248633|PEX1	nc|ENSG00000127980|O43933-2|PEX1	nc|ENSG00000127980|O43933-2|PEX1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.3180724978447	2	510.767726	1019.5209	1.7648	0.00090138	-1.897	-0.00096893	-0.13224	-6.7543E-05	510.7665086720776	71.217	0.21816	73.041	72.941	73.159	1.8239					11	6	2	0	0	0	0.094078	1	29904	29904		12.532	0	1	957990			21337	2352	10528	10567	24416	24416					0.011918548945573093
LVSLRLDFL	9	Unmodified	_LVSLRLDFL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3280517458916	2	538.329142	1074.64373	2.6684	0.0014365	-3.3166	-0.0017854	-0.64822	-0.00034895	538.3262751713155	85.3	0.47445	86.459	86.21	86.685	1.159					50	17	5	0	0	0	0.80869	1	35791	35791		5.2307	0	1	53715000			21338	1975	10529	10568	24417	24417					0.1093947940810267
LVSLSELLA	9	Unmodified	_LVSLSELLA_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	944.5662109255791	1	944.566275	943.558998	1.6654	0.0015731	-0.63867	-0.00060327	1.0268	0.00096986	944.5659579437445	68.07	0.35062	68.393	68.121	68.472	0.32269					16	10	2	0	0	0	0.22519	1	28462	28462		30.225	0	1	843630	+		21339	9993	10530	10569	24418	24418					0.08496108871509023
LVSLSELLA	9	Unmodified	_LVSLSELLA_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	944.566275	943.558998	1.5602	0.0014737	-1.8881	-0.0017835	-0.32799	-0.00030981	944.5647416238448	68.501	0.31463	68.501	68.359	68.673	0	0.054009	-0.00069791	NaN	30.225	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629960	+		21340	9993	10530	10569							0.08496108871509023
LVSPHEWE	8	Unmodified	_LVSPHEWE_					0	0	0		ENSG00000268629|ENST00000600991|TEX13A	ENSG00000268629|ENST00000600991|TEX13A	ENSG00000268629|ENST00000600991|TEX13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7438537478447	2	498.742899	995.471246	1.1239	0.00056051	0.88944	0.0004436	2.0133	0.0010041	498.7431065321736	77.614	0.64162	79.365	79.105	79.746	1.7514					61	20	5	0	0	0	0.88587	1	32534	32534		5.2307	2.3415	1	3913100			21341	5440	10531	10570	24419	24419					-0.026670919992398012
LVSQHMEPL	9	Unmodified	_LVSQHMEPL_					0	0	0		ENST00000369014.9_1_1:150595073-150595295:-|nuORF	ENST00000369014.9_1_1:150595073-150595295:-|nuORF	ENST00000369014.9_1_1:150595073-150595295:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.2741577029228	2	527.273509	1052.53247	2.8109	0.0014821	0.16384	8.6391E-05	2.9748	0.0015685	527.2736278324337	86.607	0.20795	86.607	86.489	86.697	0					9	6	2	0	0	0	0.5697	1	36114	36114		12.532	3.9383	1	684170			21342	6092	10532	10571	24420	24420					0.008300967085460798
LVSQHMEPL	9	Unmodified	_LVSQHMEPL_					0	0	0		ENST00000369014.9_1_1:150595073-150595295:-|nuORF	ENST00000369014.9_1_1:150595073-150595295:-|nuORF	ENST00000369014.9_1_1:150595073-150595295:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	527.273509	1052.53247	2.8188	0.0014863	1.9995	0.0010543	4.8183	0.0025405	527.2747145299944	84.818	0.14896	86.415	86.311	86.46	1.5962	-0.07173	0.00056327	NaN	12.532	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	699670			21343	6092	10532	10571							0.008300967085460798
LVSRYAITV	9	Unmodified	_LVSRYAITV_					0	0	0		ENST00000593477.1_1_19:41313377-41313766:+|nuORF	ENST00000593477.1_1_19:41313377-41313766:+|nuORF	ENST00000593477.1_1_19:41313377-41313766:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.3074218630791	2	511.305667	1020.59678	2.1404	0.0010944	0.91853	0.00046965	3.0589	0.001564	511.3061952616975	54.625	0.34225	54.625	54.448	54.79	0					22	10	3	0	0	0	0.20671	1	22737	22737		32.305	4.6767	1	1587100			21344	7504	10533	10572	24421	24421					0.08730619856987687
LVSVVSALV	9	Unmodified	_LVSVVSALV_					0	0	0		ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7851135134697	2	443.784036	885.553519	2.3248	0.0010317	1.1445	0.00050789	3.4693	0.0015396	443.78435076125555	63.722	0.40277	65.129	64.869	65.272	1.4071					17	12	2	0	0	0	0.54523	1	26737	26737		13.508	0	1	2783200			21345	6754	10534	10573	24422	24422					0.10616430079710426
LVSVVSALV	9	Unmodified	_LVSVVSALV_					0	0	0		ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	ENST00000472558.6_1_12:6657995-6658223:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	443.784036	885.553519	2.3865	0.0010591	0.969	0.00043003	3.3555	0.0014891	443.78409332623426	63.162	0.37466	65.106	64.905	65.279	1.9444	-0.011172	-8.8734E-05	NaN	13.508	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2288800			21346	6754	10534	10573							0.10616430079710426
LVTALLVLI	9	Unmodified	_LVTALLVLI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.2213317751884	2	477.833529	953.652505	1.6811	0.00080328	-1.6863	-0.00080577	-0.0052209	-2.4947E-06	477.83263492416904	98.434	0.15048	98.434	98.353	98.504	0					10	5	3	0	0	0	0.079834	1	41134	41134		18.135	0	1	60609000	+		21347	15042	10535	10574	24423	24423					0.17382453044604063
LVTALLVLI	9	Unmodified	_LVTALLVLI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	478.2218505740166	2	477.833529	953.652505	3.5358	0.0016895	-2.9622	-0.0014155	0.5736	0.00027408	477.8322180356978	98.35	0.14526	98.43	98.33	98.475	0.080376					7	4	2	0	0	0	0.079834	1	41173	41173		24.674	0	1	11692000	+		21348	15042	10535	10574	24424	24424					0.17382453044604063
LVTAQATVR	9	Unmodified	_LVTAQATVR_					0	0	0			REV__TATDN1-RNF139|1|fusion	REV__TATDN1-RNF139|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7877990603447	2	479.787641	957.56073	0.027085	1.2995E-05	-0.38143	-0.000183	-0.35434	-0.00017001	479.78742590310924	11.733	0.12599	12.521	12.442	12.568	0.78751					5	3	2	0	0	0	0.42305	1	4875	4875		19.257	0	1	987160	+		21349	11000	10536	10575	24425	24425					0.0802516268013278
LVTAQATVR	9	Unmodified	_LVTAQATVR_					0	0	0			REV__TATDN1-RNF139|1|fusion	REV__TATDN1-RNF139|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	479.787641	957.56073	-0.1699	-8.1514E-05	-0.42368	-0.00020328	-0.59358	-0.00028479	479.7875712170974	11.841	0.09271	12.535	12.479	12.572	0.69395	0.0070236	-1.9194E-05	NaN	19.257	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634460	+		21350	11000	10536	10575							0.0802516268013278
LVTAQATVR	9	Unmodified	_LVTAQATVR_					0	0	0			REV__TATDN1-RNF139|1|fusion	REV__TATDN1-RNF139|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	479.787641	957.56073	0.027085	1.2995E-05	-0.38143	-0.000183	-0.35434	-0.00017001	479.78742590310924	11.733	0.12599	12.521	12.442	12.568	0.78751	-0.0070236	2.1352E-05	NaN	19.257	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	987160	+		21351	11000	10536	10575							0.0802516268013278
LVTDKTLLI	9	Unmodified	_LVTDKTLLI_					0	0	0		ENSG00000188001|ENST00000345063|TPRG1	ENSG00000188001|ENST00000345063|TPRG1	ENSG00000188001|ENST00000345063|TPRG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.7363769412041	2	508.323525	1014.6325	2.4664	0.0012537	2.537	0.0012896	5.0034	0.0025434	508.32577227089007	71.367	0.36472	72.708	72.541	72.905	1.3415					31	11	3	0	0	0	0.11463	1	29903	29903		12.532	4.6214	1	8303700			21352	4844	10537	10576	24426	24426					0.12576657314014028
LVTGKLKRYF	10	Unmodified	_LVTGKLKRYF_					0	0	0		ENST00000508173.5_1_5:149240460-149276122:-|nuORF;PDE6A|p.M661Ifs*35|1|0.04|ENSG00000132915|chr5:149884523-149884524|-/TGTGGCTTGTGCAATTGGA|frameshift_variant;ENSG00000132915|ENST00000255266|PDE6A	ENST00000508173.5_1_5:149240460-149276122:-|nuORF	ENST00000508173.5_1_5:149240460-149276122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8805419802666	2	612.876791	1223.73903	4.008	0.0024564	2.4995	0.0015319	6.5076	0.0039883	612.8782070159842	91.666	0.55401	92.602	92.307	92.861	0.93623					56	17	4	0	0	0	0.85124	2	38596	38596;38648		6.7232	0	1	20272000			21353	2549	10538	10577	24427;24428	24427					0.13610832599169953
LVTGKLKRYF	10	Unmodified	_LVTGKLKRYF_					0	0	0		ENST00000508173.5_1_5:149240460-149276122:-|nuORF;PDE6A|p.M661Ifs*35|1|0.04|ENSG00000132915|chr5:149884523-149884524|-/TGTGGCTTGTGCAATTGGA|frameshift_variant;ENSG00000132915|ENST00000255266|PDE6A	ENST00000508173.5_1_5:149240460-149276122:-|nuORF	ENST00000508173.5_1_5:149240460-149276122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8805419802666	2	612.876791	1223.73903	3.2992	0.002022	3.3207	0.0020352	6.6199	0.0040572	612.8786866925168	91.352	0.52451	92.718	92.438	92.963	1.366					53	16	4	0	0	0	0.88022	1	38426	38426		3.5965	0	1	15937000			21354	2549	10538	10577	24429	24429					0.13610832599169953
LVTLHLIV	8	Unmodified	_LVTLHLIV_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.3051330447197	2	454.302396	906.590239	2.3278	0.0010575	0.12278	5.5778E-05	2.4506	0.0011133	454.3031441972381	47.504	0.32233	47.835	47.667	47.989	0.33034					18	10	2	0	0	0	0.74212	1	19939	19939		26.341	0	1	1168300	+		21355	10448	10539	10578	24430	24430					0.13320726696292695
LVTLHLIV	8	Unmodified	_LVTLHLIV_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.3038207888603	2	454.302396	906.590239	2.0611	0.00093638	0.42958	0.00019516	2.4907	0.0011315	454.30269813472887	45.818	0.31128	47.193	47.023	47.334	1.3751					25	9	3	0	0	0	0.56817	1	19225	19225		42.968	8.7807	1	3394900	+		21356	10448	10539	10578	24431	24431					0.13320726696292695
LVTLLRRF	8	Unmodified	_LVTLLRRF_					0	0	0		ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3334533572197	2	509.332019	1016.64948	2.9452	0.0015001	-1.4461	-0.00073655	1.4991	0.00076354	509.33116770278207	84.802	0.35164	86.399	86.188	86.539	1.5962					28	11	3	0	0	0	0.80415	1	35556	35556		20.871	0	1	6132600			21357	2796	10540	10579	24432	24432					0.141826227104616
LVTLLRRF	8	Unmodified	_LVTLLRRF_					0	0	0		ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	509.332019	1016.64948	2.9173	0.0014859	-3.3506	-0.0017066	-0.43331	-0.0002207	509.3301347531373	86.654	0.2549	86.654	86.489	86.744	0	0.16927	-0.0013798	NaN	20.871	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2877700			21358	2796	10540	10579							0.141826227104616
LVTLLRRF	8	Unmodified	_LVTLLRRF_					0	0	0		ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.332019	1016.64948	2.7758	0.0014138	-1.5519	-0.00079041	1.2239	0.00062338	509.33121802051215	86.19	0.44865	86.443	86.25	86.699	0.25227	-0.042289	0.00045257	NaN	20.871	27	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2088600			21359	2796	10540	10579							0.141826227104616
LVTLLRRF	8	Unmodified	_LVTLLRRF_					0	0	0		ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	ENSG00000137869|ENST00000396402|CYP19A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	509.332019	1016.64948	2.8438	0.0014484	-2.6805	-0.0013653	0.16325	8.3149E-05	509.33078670729617	85.285	0.37856	86.444	86.21	86.589	1.159	-0.040667	-0.00069718	NaN	20.871	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4664100			21360	2796	10540	10579							0.141826227104616
LVTPDVLHV	9	Unmodified	_LVTPDVLHV_					0	0	0		ENST00000376387.4_1_13:100206706-100207861:+|nuORF	ENST00000376387.4_1_13:100206706-100207861:+|nuORF	ENST00000376387.4_1_13:100206706-100207861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7934142947197	2	496.792392	991.570232	2.2899	0.0011376	-0.82935	-0.00041201	1.4606	0.00072561	496.7926439074777	47.967	0.24664	49.944	49.775	50.022	1.9772					14	7	3	0	0	0	0.1735	1	20097	20097		36.044	0	1	909200			21361	6189	10541	10580	24433	24433					0.0741093096565919
LVTSDVLTI	9	Unmodified	_LVTSDVLTI_					0	0	0		MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant;ENST00000394321.9_1_19:7591427-7598678:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	960.5625488162041	1	960.561189	959.553913	1.7131	0.0016455	0.54424	0.00052277	2.2573	0.0021683	960.5609209723006	73.312	0.34077	73.312	73.121	73.462	0					23	10	3	0	0	0	0.031324	2	30520	30520;30575		85.357	3.7437	1	2147900			21362	1141	10542	10581	24434;24435	24434					0.07251805008900192
LVTSDVLTI	9	Unmodified	_LVTSDVLTI_					0	0	0		MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant;ENST00000394321.9_1_19:7591427-7598678:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	960.5629150271416	1	960.561189	959.553913	2.123	0.0020392	0.3458	0.00033216	2.4688	0.0023714	960.5606915876788	72.881	0.35241	73.206	73.05	73.403	0.32494					24	10	3	0	0	0	0.051699	1	30516	30516		67.344	3.1075	1	1683100			21363	1141	10542	10581	24436	24436					0.07251805008900192
LVTSDVLTI	9	Unmodified	_LVTSDVLTI_					0	0	0		MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant;ENST00000394321.9_1_19:7591427-7598678:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7843505740166	2	480.784233	959.553913	1.7781	0.00085487	-0.44242	-0.00021271	1.3356	0.00064216	480.7840489759702	71.709	0.59341	73.05	72.873	73.467	1.3415					50	18	4	0	0	0	0.051699	1	30085	30085		67.344	9.8725	1	10659000			21364	1141	10542	10581	24437	24437					0.07251805008900192
LVTSDVLTI	9	Unmodified	_LVTSDVLTI_					0	0	0		MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant;ENST00000394321.9_1_19:7591427-7598678:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	960.5618163943291	1	960.561189	959.553913	1.0351	0.00099428	0.56328	0.00054106	1.5984	0.0015353	960.5613679692598	71.798	0.4669	73.139	72.905	73.372	1.3415					37	14	4	0	0	0	0.03795	1	30086	30086		77.984	13.748	1	12680000			21365	1141	10542	10581	24438	24438					0.07251805008900192
LVTSDVLTI	9	Unmodified	_LVTSDVLTI_					0	0	0		MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant;ENST00000394321.9_1_19:7591427-7598678:+|nuORF;ENSG00000090674|ENST00000264079|MCOLN1	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MCOLN1|p.L396*|1|0.4|ENSG00000090674|chr19:7529151-7529166|GCTGGTGTGGGTGGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	960.5623046755791	1	960.561189	959.553913	1.7084	0.001641	-0.70397	-0.00067621	1.0044	0.00096481	960.5604236879401	71.348	0.4726	73.172	72.972	73.445	1.824					34	14	3	0	0	0	0.031324	3	29939	29890;29939;29981		85.357	3.7437	1	10319000			21366	1141	10542	10581	24439;24440;24441	24440					0.07251805008900192
LVTSYDIDGEK	11	Unmodified	_LVTSYDIDGEK_					0	0	0			REV__DCUN1D2-TMCO3|2|fusion	REV__DCUN1D2-TMCO3|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.8764526247978	3	413.874959	1238.60305	0.34662	0.00014346	1.2424	0.0005142	1.589	0.00065766	413.8755882331026	11.354	0.39072	11.437	11.19	11.581	0.082325					19	12	2	0	0	0	0.98765	2	4711	4711;4762		2.084	0.34169	1	325200	+		21367	8426	10543	10582	24442;24443	24442					-0.006709514928161298
LVTVQSIFQE	10	Unmodified	_LVTVQSIFQE_					0	0	0			REV__ENSG00000145632|ENST00000274289|PLK2	REV__ENSG00000145632|ENST00000274289|PLK2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1544372439384	3	388.548406	1162.62339	1.1048	0.00042926	-1.9746	-0.00076724	-0.86985	-0.00033798	388.54760622040703	29.922	0.18047	30.208	30.054	30.235	0.2859					8	5	2	0	0	0	0.12559	1	12520	12520		0.77653	0	1	438550	+		21368	10278	10544	10583	24444	24444					0.04858263957657982
LVTVTTTPL	9	Unmodified	_LVTVTTTPL_					0	0	0		ENSG00000009765|ENST00000344419|IYD	ENSG00000009765|ENST00000344419|IYD	ENSG00000009765|ENST00000344419|IYD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	944.5698119997978	1	944.566275	943.558998	1.6654	0.0015731	-0.63867	-0.00060327	1.0268	0.00096986	944.5659579437445	68.07	0.35062	68.393	68.121	68.472	0.32269					16	10	2	0	0	0	0.34572	1	28518	28518		23.148	0	1	843630			21369	539	10545	10584	24445	24445					0.08496108871520391
LVVELSHPVP	10	Unmodified	_LVVELSHPVP_					0	0	0		tr|A0A7D6VUU3|A0A7D6VUU3_9CLOTPeptideABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02910PE=3SV=1	tr|A0A7D6VUU3|A0A7D6VUU3_9CLOTPeptideABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02910PE=3SV=1	tr|A0A7D6VUU3|A0A7D6VUU3_9CLOTPeptideABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02910PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3179199099541	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.964	1	72.289	71.789	72.789	0.32494								0	0	0	0.66052	1	30112	30112		3.5965	0	1				21370	16954	10546	10585	24446	24446					0.08222889028456848
LVVEVRRLLL	10	Unmodified	_LVVEVRRLLL_					0	0	0		nc|ENSG00000198399|Q9NZM3-3|ITSN2	nc|ENSG00000198399|Q9NZM3-3|ITSN2	nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.4069091677666	2	605.405715	1208.79688	1.567	0.00094869	-0.10488	-6.3494E-05	1.4621	0.00088519	605.4056782364892	107.48	0.19755	107.48	107.37	107.57	0					29	9	5	0	0	0	0.88314	1	46051	46051		3.2813	0.28607	1	139400000			21371	7969	10547	10586	24447	24447					0.20083094524625267
LVVEVRRLLL	10	Unmodified	_LVVEVRRLLL_					0	0	0		nc|ENSG00000198399|Q9NZM3-3|ITSN2	nc|ENSG00000198399|Q9NZM3-3|ITSN2	nc|ENSG00000198399|Q9NZM3-3|ITSN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.4068481326103	2	605.405715	1208.79688	3.2614	0.0019745	-2.3508	-0.0014232	0.91054	0.00055125	605.4042045326453	107.42	0.24777	107.57	107.43	107.68	0.15795					30	12	3	0	0	0	0.88314	1	46109	46109		3.2813	1.2216	1	457570000			21372	7969	10547	10586	24448	24448					0.20083094524625267
LVVGSIVLFVK	11	Unmodified	_LVVGSIVLFVK_					0	0	0		tr|A0A553SJC4|A0A553SJC4_NIACILPXTGcellwallanchordomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16495PE=4SV=1	tr|A0A553SJC4|A0A553SJC4_NIACILPXTGcellwallanchordomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16495PE=4SV=1	tr|A0A553SJC4|A0A553SJC4_NIACILPXTGcellwallanchordomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16495PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2849609255791	3	391.925037	1172.75328	1.3442	0.00052683	-2.6421	-0.0010355	-1.2979	-0.00050867	392.2589364062793	69.145	0.14188	70.51	70.443	70.585	1.3657					7	4	2	0	0	0	0.14606	1	28986	28986		0.50596	0	1	1003400			21373	16240	10548	10587	24449	24449					0.1738148502745389
LVVHFDKK	8	Unmodified	_LVVHFDKK_					0	0	0		tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2971679568291	2	493.295102	984.575651	1.4801	0.00073014	-0.11293	-5.571E-05	1.3672	0.00067443	493.2953338467376	78.471	1.0488	78.471	78.095	79.144	0					73	33	3	0	0	0	0.89176	1	32593	32593		0.79363	0.10326	1	1460700			21374	17034	10549	10588	24450	24450					0.08274654548131366
LVVHRRSH	8	Unmodified	_LVVHRRSH_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2963439822197	2	502.299042	1002.58353	2.9816	0.0014977	-3.3755	-0.0016955	-0.39385	-0.00019783	502.29727332321204	95.363	0.24844	95.765	95.681	95.929	0.40208					13	8	2	0	0	0	0.87935	1	40135	40135		9.3474	2.9933	1	1001800			21375	2087	10550	10589	24451	24451					0.08234226588274396
LVVRRKPRF	9	Unmodified	_LVVRRKPRF_					0	0	0		ENST00000355451.7_1_7:44424886-44425042:-|nuORF	ENST00000355451.7_1_7:44424886-44425042:-|nuORF	ENST00000355451.7_1_7:44424886-44425042:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	390.9231140017509	3	390.924253	1169.75093	0.70099	0.00027403	-2.9881	-0.0011681	-2.2872	-0.00089411	390.9230159345811	88.351	0.45456	88.351	88.119	88.574	0					43	14	5	0	0	0	0.847	1	36979	36979		0.96228	0.33545	1	4932900			21376	5978	10551	10590	24452	24452					0.1728449413301405
LVVYLFVP	8	Unmodified	_LVVYLFVP_					0	0	0			REV__ENSG00000003393|ENST00000264276|ALS2	REV__ENSG00000003393|ENST00000264276|ALS2	MSMS	GG20161007_CRH_Patient100_A02_01	1	475.2919799685478	2	475.291497	948.568441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.5	1	103.5	103	104	0								0	0	0	1.0178	1	43459	43459		0.79363	0	1		+		21377	8483	10552	10591	24453	24453					0.09209921947694966
LVWEVVESV	9	Unmodified	_LVWEVVESV_					0	0	0		ENST00000444563.5_1_1:43311951-43312056:-|nuORF	ENST00000444563.5_1_1:43311951-43312056:-|nuORF	ENST00000444563.5_1_1:43311951-43312056:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2902709841728	2	530.289682	1058.56481	3.3363	0.0017692	1.6661	0.0008835	5.0024	0.0026527	530.2910866711511	74.425	0.26608	75.743	75.621	75.888	1.318					18	8	3	0	0	0	0.12174	1	31232	31232		42.095	23.96	1	3092600			21378	6575	10553	10592	24454	24454					0.037872073831977104
LVWRIPRPYAL	11	Unmodified	_LVWRIPRPYAL_					0	0	0			REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF	REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	461.9500305056572	3	461.946835	1382.81868	3.3781	0.0015605	2.7853	0.0012867	6.1634	0.0028472	461.94799124263005	97.227	0.1898	97.318	97.21	97.399	0.090881					17	5	4	0	0	0	1.0388	1	40668	40668		0.50596	0.051438	1	28055000	+		21379	12717	10554	10593	24455	24455					0.1425789927320693
LVWRIPRPYAL	11	Unmodified	_LVWRIPRPYAL_					0	0	0			REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF	REV__ENST00000375895.6_1_6:31632636-31633491:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	461.946835	1382.81868	3.9792	0.0018382	2.1709	0.0010029	6.1501	0.002841	461.94778671414485	97.045	0.14828	97.329	97.242	97.39	0.28442	0.038906	-0.00092777	NaN	0.50596	16	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8348200	+		21380	12717	10554	10593							0.1425789927320693
LVYRRFLFVVF	11	Unmodified	_LVYRRFLFVVF_					0	0	0		SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant;ENSG00000081800|ENST00000194130|SLC13A1	SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	SLC13A1|p.P201Qfs*24|1|0.25|ENSG00000081800|chr7:123168513-123168513|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2941772341728	3	486.958852	1457.85473	3.3514	0.001632	0.35768	0.00017418	3.7091	0.0018062	486.9590517720984	88.921	2.1704	89.144	88.217	90.387	0.2236					163	67	3	0	0	0	1.0402	1	37600	37600		0.094841	0	1	2885200			21381	1024	10555	10594	24456	24456					0.14411356450000312
LVYYHRFLKLK	11	Unmodified	_LVYYHRFLKLK_					0	0	0			REV__ENST00000493417.5_1_9:132839594-132891041:+|nuORF	REV__ENST00000493417.5_1_9:132839594-132891041:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9655029177666	3	493.966007	1478.87619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1519	1	6.1519	5.6519	6.6519	0								0	0	0	0.63775	1	2527	2527		0.094841	0.011491	1		+		21382	10343	10556	10595	24457	24457					0.1559074147874071
LVYYLLWL	8	Unmodified	_LVYYLLWL_					0	0	0		ENST00000471517.5_1_19:38845366-38853372:+|nuORF;ENST00000412458.6_1_19:38845366-38860119:+|nuORF;ENSG00000099338|ENST00000409235|CATSPERG	ENST00000471517.5_1_19:38845366-38853372:+|nuORF	ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.8171874880791	2	541.817879	1081.6212	3.312	0.0017945	-2.8384	-0.0015379	0.47367	0.00025664	541.815679401551	92.863	0.25326	94.14	94.007	94.26	1.277					11	7	2	0	0	0	0.88958	1	39109	39109		2.8892	0	1	856180			21383	1208	10557	10596	24458	24458					0.08365880010524052
LWAGRKWQ	8	Unmodified	_LWAGRKWQ_					0	0	0			REV__ENST00000334082.10_1_5:78809398-78809584:-|nuORF	REV__ENST00000334082.10_1_5:78809398-78809584:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.7915527224541	2	522.790518	1043.56648	2.5688	0.0013429	-0.53752	-0.00028101	2.0312	0.0010619	522.7903837551063	89.603	0.37623	89.603	89.464	89.84	0					19	11	2	0	0	0	0.87935	1	37491	37491		9.3474	0	1	1942100	+		21384	12459	10558	10597	24459	24459					0.046443059824468946
LWALIKLRT	9	Unmodified	_LWALIKLRT_					0	0	0			REV__tr|A0A553SS73|A0A553SS73_NIACIArsRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02560PE=4SV=1	REV__tr|A0A553SS73|A0A553SS73_NIACIArsRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02560PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	372.1023742556572	3	371.90961	1112.707	-0.61338	-0.00022812	1.5277	0.00056818	0.91437	0.00034006	372.24397960604574	72.669	0.096207	72.669	72.588	72.684	0					4	2	2	0	0	0	0.11954	1	30234	30234		0.26902	0	1	200450	+		21385	15197	10559	10598	24460	24460					0.15515464916029487
LWAWCHVQQ	9	Unmodified	_LWAWCHVQQ_					0	0	0			REV__ENST00000566802.5_1_16:74366359-74378726:-|nuORF	REV__ENST00000566802.5_1_16:74366359-74378726:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.7798339724541	2	585.779293	1169.54403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.243	1	67.632	67.132	68.132	1.3888								0	0	0	0.36184	1	27789	27789		12.532	0	1		+		21386	8895	10560	10599	24461	24461					-0.03395661477475187
LWDRCRKRWLR	11	Unmodified	_LWDRCRKRWLR_					0	0	0		ENST00000432193.5_1_7:86970965-86974694:-|nuORF;ENST00000359941.9_1_7:86974424-86974694:-|nuORF	ENST00000432193.5_1_7:86970965-86974694:-|nuORF	ENST00000432193.5_1_7:86970965-86974694:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	530.2169067263603	3	529.964894	1586.87285	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.235	1	37.54	37.04	38.04	0.30497								0	0	0	0.63775	1	15660	15660		0.08335	0	1				21387	6023	10561	10600	24462	24462					0.10289168153076389
LWDRKHRRLIR	11	Unmodified	_LWDRKHRRLIR_					0	0	0			REV__CDH3|p.V110L|1|0.08|ENSG00000062038|chr16:68678215-68678215|G/T|missense_variant	REV__CDH3|p.V110L|1|0.08|ENSG00000062038|chr16:68678215-68678215|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.9904357790947	4	387.989109	1547.92733	0.55279	0.00021448	2.943	0.0011418	3.4958	0.0013563	387.99033557006	36.402	0.28302	38.219	38.118	38.401	1.8176					52	22	3	0	0	0	1.0393	1	15298	15298		0.36667	0.037403	1	10526000	+		21388	8197	10562	10601	24463	24463					0.175285032961483
LWDRKHRRLIR	11	Unmodified	_LWDRKHRRLIR_					0	0	0			REV__CDH3|p.V110L|1|0.08|ENSG00000062038|chr16:68678215-68678215|G/T|missense_variant	REV__CDH3|p.V110L|1|0.08|ENSG00000062038|chr16:68678215-68678215|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2415649294853	4	387.989109	1547.92733	0.54851	0.00021281	2.287	0.00088732	2.8355	0.0011001	387.9899209257116	36.607	0.095139	38.425	38.401	38.496	1.8176					11	7	2	0	0	0	1.0391	1	15350	15350		0.40827	0	1	9447600	+		21389	8197	10562	10601	24464	24464					0.175285032961483
LWFHFKRYRYR	11	Unmodified	_LWFHFKRYRYR_					0	0	0		ENSG00000105298|ENST00000429344|CACTIN;nc|ENSG00000105298|Q8WUQ7-2|CACTIN	ENSG00000105298|ENST00000429344|CACTIN	ENSG00000105298|ENST00000429344|CACTIN	MSMS	GG20161007_CRH_Patient100_W632_02	4	836.2712280154228	2	836.454594	1670.89463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.75	1	98.976	98.476	99.476	0.22545								0	0	0	0.63775	1	41559	41559		1.3295	0.9789	1				21390	1509	10563	10602	24465	24465					0.08602296173307877
LWFWWLEYYYN	11	Unmodified	_LWFWWLEYYYN_					0	0	0			REV__WBP1L|p.C61Sfs*21|1|0.08|ENSG00000166272|chr10:102809944-102809944|G/-|frameshift_variant	REV__WBP1L|p.C61Sfs*21|1|0.08|ENSG00000166272|chr10:102809944-102809944|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	842.3088867068291	2	841.887552	1681.76055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.132	1	96.553	96.053	97.053	0.4212								0	0	0	0.63775	1	40450	40450		0.30703	0	1		+		21391	10815	10564	10603	24466	24466					-0.05305827162737842
LWKLKAFRAKR	11	Unmodified	_LWKLKAFRAKR_					0	0	0			REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	355.2302734255791	4	354.979216	1415.88776	1.1212	0.00039799	0.36741	0.00013042	1.4886	0.00052841	354.9792667839904	35.676	0.44585	35.976	35.825	36.271	0.29941					116	41	4	0	0	0	1.039	4	14955	14955;14982;15026;15070		0.45452	0	1	84144000	+		21392	13520	10565	10604	24467;24468;24469;24470	24467					0.19644983292732832
LWKLKAFRAKR	11	Unmodified	_LWKLKAFRAKR_					0	0	0			REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.2302734255791	4	354.979216	1415.88776	1.1212	0.00039799	0.36741	0.00013042	1.4886	0.00052841	354.9792667839904	35.676	0.44585	35.976	35.825	36.271	0.29941					116	41	4	0	0	0	0.14606	1	14955	14955		0.45452	0	1	84144000	+		21393	13520	10565	10604	24471	24471					0.19644983292732832
LWKLKAFRAKR	11	Unmodified	_LWKLKAFRAKR_					0	0	0			REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	REV__ENST00000503687.2_2_7:66094097-66236887:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	354.9797546267509	4	354.979216	1415.88776	0.40284	0.000143	0.77633	0.00027558	1.1792	0.00041858	354.9794003403829	33.506	0.35849	35.329	35.164	35.523	1.8227					96	31	4	0	0	0	1.039	1	14084	14084		0.45452	0	1	121030000	+		21394	13520	10565	10604	24472	24472					0.19644983292732832
LWKYILDA	8	Unmodified	_LWKYILDA_					0	0	0		tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1967956423759	3	341.195416	1020.56442	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.86	103.36	104.36	0.059502								0	0	0	1.0178	1	43632	43632		0.40072	0	1				21395	16555	10566	10605	24473	24473					0.0549583245398253
LWKYILDA	8	Unmodified	_LWKYILDA_					0	0	0		tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	tr|A0A553SRG6|A0A553SRG6_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_00895PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.1959411501884	3	341.195416	1020.56442	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.75	1	103.91	103.41	104.41	0.16055								0	0	0	1.0178	1	43811	43811		0.40072	0	1				21396	16555	10566	10605	24474	24474					0.0549583245398253
LWLAQALGEL	10	Unmodified	_LWLAQALGEL_					0	0	0			REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	REV__GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.3110839724541	2	557.318774	1112.623	2.7226	0.0015173	-1.5367	-0.00085642	1.1859	0.00066092	557.3184861484433	64.137	0.15601	65.544	65.466	65.622	1.4071					9	4	3	0	0	0	0.099754	1	26876	26876		60.074	11.728	1	4686100	+		21397	10933	10567	10606	24475	24475					0.07118889028470221
LWLARKLGTLA	11	Unmodified	_LWLARKLGTLA_					0	0	0			REV__nc|ENSG00000175764|Q8NHH1-2|TTLL11	REV__nc|ENSG00000175764|Q8NHH1-2|TTLL11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	621.3937866091728	2	621.390065	1240.76558	2.3374	0.0014524	2.79	0.0017337	5.1274	0.0031861	621.3917814315166	92.458	0.54696	92.458	92.197	92.744	0					63	17	5	0	0	0	0.95124	2	38615	38615;38664		6.7232	2.3939	1	34248000	+		21398	14493	10568	10607	24476;24477	24476					0.15482521490548606
LWLILPEK	8	Unmodified	_LWLILPEK_					0	0	0			REV__nc|ENSG00000145850|Q96H15-2|TIMD4	REV__nc|ENSG00000145850|Q96H15-2|TIMD4	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3170043826103	2	506.315503	1010.61645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.789	1	34.789	34.289	35.289	0								0	0	0	1.0178	1	14581	14581		2.3027	0	1		+		21399	10287	10569	10608	24478	24478					0.11156995867759179
LWLIRAPRLRP	11	Unmodified	_LWLIRAPRLRP_					0	0	0			REV__ENST00000457390.1_1:148932843-148933312:+|nuORF	REV__ENST00000457390.1_1:148932843-148933312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.4764282107353	4	348.475304	1389.87211	0.77962	0.00027168	2.1891	0.00076286	2.9688	0.0010345	348.4760796759304	30.759	0.97569	31.045	30.469	31.444	0.2859					88	32	3	0	0	0	1.039	1	12997	12997		0.45452	0	1	3326500	+		21400	13169	10570	10609	24479	24479					0.1927669677565973
LWLLLRLRGGR	11	Unmodified	_LWLLLRLRGGR_					0	0	0			REV__KREMEN2|p.S131Cfs*47|1|0.38|ENSG00000131650|chr16:2966354-2966355|-/G|frameshift_variant	REV__KREMEN2|p.S131Cfs*47|1|0.38|ENSG00000131650|chr16:2966354-2966355|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.9709350466728	4	338.971391	1351.85646	-1.8818	-0.00063789	-0.46043	-0.00015607	-2.3423	-0.00079396	338.97134967247854	33.714	0.8035	33.714	33.328	34.131	0					99	25	5	0	0	0	1.039	1	14120	14120		0.45452	0	1	4120500	+		21401	14243	10571	10610	24480	24480					0.19460410258602678
LWLLRKLP	8	Unmodified	_LWLLRKLP_					0	0	0		ENST00000358062.6_2_X:31792243-31792276:-|nuORF	ENST00000358062.6_2_X:31792243-31792276:-|nuORF	ENST00000358062.6_2_X:31792243-31792276:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.4008666872978	2	519.844762	1037.67497	3.2892	0.0017099	-3.0856	-0.001604	0.20359	0.00010584	519.8414752336876	103.36	0.089172	103.54	103.49	103.58	0.18066					5	3	2	0	0	0	2.3239	1	43530	43530		2.8892	0	1	1294300			21402	6006	10572	10611	24481	24481					0.15764097232886343
LWLLVPPTI	9	Unmodified	_LWLLVPPTI_					0	0	0			REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3350097537041	2	526.331153	1050.64775	2.4711	0.0013006	2.9613	0.0015586	5.4324	0.0028592	526.3324613830767	76.028	0.4552	76.349	76.176	76.631	0.32163					28	14	2	0	0	0	0.77526	1	31894	31894		4.3292	0.38484	1	1411300	+		21403	12996	10573	10612	24482	24482					0.12445568901853221
LWLLVPPTI	9	Unmodified	_LWLLVPPTI_					0	0	0			REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	526.331153	1050.64775	2.4711	0.0013006	2.9613	0.0015586	5.4324	0.0028592	526.3324613830767	76.028	0.4552	76.349	76.176	76.631	0.32163	-0.13721	-0.00014396	NaN	4.3292	28	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1411300	+		21404	12996	10573	10612							0.12445568901853221
LWLLVPPTI	9	Unmodified	_LWLLVPPTI_					0	0	0			REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	REV__ENST00000426339.1_1_10:98320174-98320360:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.331153	1050.64775	2.8843	0.0015181	3.5279	0.0018568	6.4121	0.0033749	526.3335320793896	74.842	0.18668	76.624	76.481	76.668	1.7817	0.13721	0.00045248	NaN	4.3292	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920900	+		21405	12996	10573	10612							0.12445568901853221
LWLMYFVST	9	Unmodified	_LWLMYFVST_					0	0	0			REV__ENSG00000203737|ENST00000367685|GPR52	REV__ENSG00000203737|ENST00000367685|GPR52	MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3695556521416	2	580.296453	1158.57835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.92	1	104.09	103.59	104.59	0.1731								0	0	0	0.42693	1	43872	43872		2.0598	0.57785	1		+		21406	11764	10574	10613	24483	24483					0.005407418907680039
LWLRPRLLPGI	11	Unmodified	_LWLRPRLLPGI_					0	0	0		ENST00000580473.5_1_18:74799306-74799519:-|nuORF	ENST00000580473.5_1_18:74799306-74799519:-|nuORF	ENST00000580473.5_1_18:74799306-74799519:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1202880740166	3	445.28708	1332.83941	1.8552	0.00082608	2.437	0.0010852	4.2922	0.0019113	445.28813431995565	49.428	0.65903	51.405	51.099	51.758	1.9772					38	20	2	0	0	0	0.14606	1	20601	20601		0.094841	0	1	7495800			21407	7432	10575	10614	24484	24484					0.18630489652832694
LWLSLPVRLP	10	Unmodified	_LWLSLPVRLP_					0	0	0		ENST00000400968.6_1_1:193028645-193038169:+|nuORF;ENST00000432079.5_1_1:193028645-193044961:+|nuORF	ENST00000400968.6_1_1:193028645-193038169:+|nuORF	ENST00000400968.6_1_1:193028645-193038169:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.5855285525322	3	398.585015	1192.73321	0.080825	3.2216E-05	0.77223	0.0003078	0.85306	0.00034001	398.58560658779015	32.84	0.49483	34.119	33.824	34.319	1.2782					38	17	3	0	0	0	0.8974	1	13838	13838		1.7423	1.7423	1	4555000			21408	6346	10576	10615	24485	24485					0.14455734087528072
LWMLDCDCVLA	11	Unmodified	_LWMLDCDCVLA_					0	0	0			REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	REV__nc|ENSG00000147485|A1KZ92-2|PXDNL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	427.1959411501884	3	427.860722	1280.56034	3.0051	0.0012858	3.8325	0.0016398	6.8377	0.0029256	428.19733235041684	92.076	0.41769	92.266	92.047	92.465	0.19042					45	12	5	0	0	0	0.14606	1	38530	38530		1.3296	0.55311	1	2171900	+		21409	10326	10577	10616	24486	24486					-0.06872084417886981
LWPDNEDDENS	11	Unmodified	_LWPDNEDDENS_					0	0	0			REV__nc|ENSG00000139697|A3KN83-3|SBNO1	REV__nc|ENSG00000139697|A3KN83-3|SBNO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1202880740166	3	445.177478	1332.5106	1.8541	0.00082542	-1.6662	-0.00074174	0.18798	8.3686E-05	445.1766078101257	49.493	0.68946	51.47	51.099	51.788	1.9772					49	21	3	0	0	0	0.14606	1	20601	20601		0.094841	0	1	6909600	+		21410	10108	10578	10617	24487	24487					-0.14235081296988028
LWPHDEVGPLQ	11	Unmodified	_LWPHDEVGPLQ_					0	0	0			REV__ENST00000592063.5_3_17:76122934-76124826:-|nuORF	REV__ENST00000592063.5_3_17:76122934-76124826:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.2	1	118.36	117.86	118.86	0.16237								0	0	0	0.63775	1	51034	51034		0.094841	0	1		+		21411	14073	10579	10618	24488	24488					0.007201845634881465
LWQEIDEMLC	10	Unmodified	_LWQEIDEMLC_					0	0	0			REV__ENST00000492723.1_1_22:35741624-35743199:+|nuORF	REV__ENST00000492723.1_1_22:35741624-35743199:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.1959411501884	3	427.194758	1278.56245	2.9936	0.0012789	-0.27857	-0.000119	2.7151	0.0011599	427.1943835063404	92.047	0.84647	92.238	91.981	92.828	0.19041					38	26	2	0	0	0	0.87699	1	38530	38530		1.9064	0.57673	1	2600400	+		21412	8980	10580	10619	24489	24489					-0.06569332408412265
LWQEIDEMLC	10	Unmodified	_LWQEIDEMLC_					0	0	0			REV__ENST00000492723.1_1_22:35741624-35743199:+|nuORF	REV__ENST00000492723.1_1_22:35741624-35743199:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.1962463259697	3	427.194758	1278.56245	4.1698	0.0017813	1.1948	0.0005104	5.3645	0.0022917	427.5299888214743	91.167	0.47475	92.149	91.942	92.417	0.98157					25	14	2	0	0	0	0.87699	1	38392	38392		1.9064	0	1	3103200	+		21413	8980	10580	10619	24490	24490					-0.06569332408412265
LWQGRLVRHL	10	Unmodified	_LWQGRLVRHL_					0	0	0			REV__ENST00000358463.2_1_16:73161256-73177677:-|nuORF	REV__ENST00000358463.2_1_16:73161256-73177677:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	426.5932494997978	3	426.591163	1276.75166	0.81186	0.00034633	2.3738	0.0010126	3.1857	0.001359	426.92689646909173	37.792	0.18312	39.612	39.486	39.67	1.8202					13	5	3	0	0	0	0.8974	1	15827	15827		1.7423	0.52744	1	1278500	+		21414	12572	10581	10620	24491	24491					0.12435288782080534
LWQIYTHNHEL	11	Unmodified	_LWQIYTHNHEL_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.5808593630791	3	485.245609	1452.715	2.2581	0.0010957	0.073388	3.5611E-05	2.3315	0.0011313	485.58012813851553	72.042	0.77243	73.383	73.122	73.894	1.3415					51	24	3	0	0	0	1.0357	1	30301	30301		1.4551	0	1	1601700	+		21415	9556	10582	10621	24492	24492					0.006749473748413948
LWQIYTHNHEL	11	Unmodified	_LWQIYTHNHEL_					0	0	0			REV__ENSG00000119900|ENST00000370435|OGFRL1	REV__ENSG00000119900|ENST00000370435|OGFRL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2474243044853	3	485.245609	1452.715	2.0769	0.0010078	-0.24583	-0.00011929	1.8311	0.00088852	485.24585749361086	71.522	0.83884	73.346	73.065	73.904	1.8239					59	26	3	0	0	0	1.0357	1	30086	30086		1.4551	0	1	1633500	+		21416	9556	10582	10621	24493	24493					0.006749473748413948
LWQLIIRL	8	Unmodified	_LWQLIIRL_					0	0	0			REV__ENSG00000023516|ENST00000025301|AKAP11	REV__ENSG00000023516|ENST00000025301|AKAP11	MSMS	GG20161007_CRH_Patient100_W632_02	4	352.2316772341728	3	352.230572	1053.66989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.516	1	87.063	86.563	87.563	1.547								0	0	0	1.0178	1	35950	35950		0.40072	0	1		+		21417	8563	10583	10622	24494	24494					0.14519793370277512
LWQRIKKTT	9	Unmodified	_LWQRIKKTT_					0	0	0			REV__tr|A0A553SUR1|A0A553SUR1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05345PE=4SV=1	REV__tr|A0A553SUR1|A0A553SUR1_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05345PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	587.3583251833916	2	587.358765	1172.70298	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.58	1	103.74	103.24	104.24	0.16445								0	0	0	0.42693	1	43691	43691		2.0598	0	1		+		21418	15305	10584	10623	24495	24495					0.12353375422321733
LWQYKSSADK	10	Unmodified	_LWQYKSSADK_					0	0	0		chr1:163322066-163326032|413|15.3|0.63|4.6|+|ENST00000497990|NUF2,NUF2;ENSG00000143228|ENST00000271452|NUF2	chr1:163322066-163326032|413|15.3|0.63|4.6|+|ENST00000497990|NUF2,NUF2	chr1:163322066-163326032|413|15.3|0.63|4.6|+|ENST00000497990|NUF2,NUF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.3127319216728	2	613.31422	1224.61389	0.26382	0.0001618	-2.6918	-0.0016509	-2.428	-0.0014891	613.312621931397	15.999	0.27702	16.129	15.963	16.24	0.13022					27	8	4	0	0	0	0.25725	1	6646	6646		41.956	3.3408	1	5468000			21419	163	10585	10624	24496	24496					0.010564956721282215
LWRHPWVIH	9	Unmodified	_LWRHPWVIH_					0	0	0			REV__nc|ENSG00000121964|Q4AE62-2|GTDC1	REV__nc|ENSG00000121964|Q4AE62-2|GTDC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	622.3464843630791	2	622.345992	1242.67743	2.5571	0.0015914	-1.6666	-0.0010372	0.89047	0.00055418	622.3450170170248	92.066	0.75436	92.257	91.949	92.703	0.19042					78	23	5	0	0	0	0.64949	1	38481	38481		9.3474	4.1168	1	24069000	+		21420	14418	10586	10625	24497	24497					0.06579945690555178
LWRHPWVIH	9	Unmodified	_LWRHPWVIH_					0	0	0			REV__nc|ENSG00000121964|Q4AE62-2|GTDC1	REV__nc|ENSG00000121964|Q4AE62-2|GTDC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3490478396416	2	622.345992	1242.67743	3.8504	0.0023963	-0.86313	-0.00053717	2.9872	0.0018591	622.3454878545537	91.19	0.6326	92.171	91.942	92.575	0.98157					75	19	5	0	0	0	0.64949	1	38338	38338		9.3474	0.75416	1	29446000	+		21421	14418	10586	10625	24498	24498					0.06579945690555178
LWRPAILTA	9	Unmodified	_LWRPAILTA_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.5470458865166	3	347.54656	1039.61785	1.3884	0.00048254	0.76655	0.00026641	2.155	0.00074895	347.5468510524247	42.422	0.80695	42.743	42.574	43.381	0.32058					52	26	2	0	0	0	0.76103	1	18057	18057		4.897	0.36815	1	4306100	+		21422	10878	10587	10626	24499	24499					0.09962629956521596
LWRPAILTA	9	Unmodified	_LWRPAILTA_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.5476867556572	3	347.54656	1039.61785	1.3732	0.00047726	2.6659	0.00092651	4.0391	0.0014038	347.54731709310414	44.793	0.73507	45.12	44.515	45.25	0.32674					62	24	3	0	0	0	0.76103	1	18665	18665		4.897	0.36815	1	3205800	+		21423	10878	10587	10626	24500	24500					0.09962629956521596
LWRPAILTA	9	Unmodified	_LWRPAILTA_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	347.54656	1039.61785	-1.133	-0.00039376	3.6487	0.0012681	2.5157	0.00087433	347.5479217223499	45.502	0.69108	45.502	44.902	45.593	0	0.29737	0.00043965	NaN	4.897	41	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3476200	+		21424	10878	10587	10626							0.09962629956521596
LWRPAILTA	9	Unmodified	_LWRPAILTA_					0	0	0			REV__ENSG00000167757|ENST00000453757|KLK11	REV__ENSG00000167757|ENST00000453757|KLK11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	347.54656	1039.61785	1.3732	0.00047726	2.6659	0.00092651	4.0391	0.0014038	347.54731709310414	44.793	0.73507	45.12	44.515	45.25	0.32674	-0.085465	-0.00058509	NaN	4.897	62	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3205800	+		21425	10878	10587	10626							0.09962629956521596
LWRRRHRRST	10	Unmodified	_LWRRRHRRST_					0	0	0			REV__ENST00000263864.9_1_2:85808699-85808759:+|nuORF	REV__ENST00000263864.9_1_2:85808699-85808759:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7098571658134	4	356.711805	1422.81812	-0.81591	-0.00029105	-1.3755	-0.00049065	-2.1914	-0.0007817	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	0.89803	1	22175	22175		0.69767	0.19171	1	19031000	+		21426	12205	10588	10627	24501	24501					0.12361917396674471
LWRRRQRQRS	10	Unmodified	_LWRRRQRQRS_					0	0	0		ENST00000263754.4_1_3:20081618-20081714:+|nuORF	ENST00000263754.4_1_3:20081618-20081714:+|nuORF	ENST00000263754.4_1_3:20081618-20081714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2843810915947	3	481.283503	1440.82868	2.6329	0.0012672	-0.43599	-0.00020984	2.197	0.0010574	481.2828511221248	89.071	1.161	89.071	88.334	89.495	0					95	36	3	0	0	0	0.89803	1	37096	37096		0.69767	0.19171	1	4938900			21427	5645	10589	10628	24502	24502					0.12589900051102632
LWRRRQRQRS	10	Unmodified	_LWRRRQRQRS_					0	0	0		ENST00000263754.4_1_3:20081618-20081714:+|nuORF	ENST00000263754.4_1_3:20081618-20081714:+|nuORF	ENST00000263754.4_1_3:20081618-20081714:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2849304080009	3	481.283503	1440.82868	3.4069	0.0016397	-1.2603	-0.00060657	2.1466	0.0010331	481.2819696974726	88.412	0.43864	88.647	88.447	88.885	0.23471					29	13	3	0	0	0	0.89803	1	37081	37081		0.15932	0.064481	1	1754800			21428	5645	10589	10628	24503	24503					0.12589900051102632
LWRVYRPRVP	10	Unmodified	_LWRVYRPRVP_					0	0	0		nc|ENSG00000170468|Q9H6W3-2|RIOX1;ENSG00000170468|ENST00000304061|RIOX1	nc|ENSG00000170468|Q9H6W3-2|RIOX1	nc|ENSG00000170468|Q9H6W3-2|RIOX1	MSMS	GG20161007_CRH_Patient100_W632_01	3	671.3954345583916	2	671.398756	1340.78296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.933	1	98.16	97.66	98.66	0.22776								0	0	0	0.66008	1	41216	41216		4.3292	1.0479	1				21429	4147	10590	10629	24504	24504					0.12619861816165212
LWSLHVSLF	9	Unmodified	_LWSLHVSLF_					0	0	0			REV__nc|ENSG00000158941|Q8N163-2|CCAR2	REV__nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	551.3110229372978	2	551.30821	1100.60187	2.7207	0.0014999	1.3361	0.0007366	4.0568	0.0022365	551.3101483449826	101.16	0.14822	101.22	101.09	101.24	0.067009					8	4	3	0	0	0	0.68551	1	42350	42350		7.9102	0	1	7763600	+		21430	10566	10591	10630	24505	24505					0.05558923719604536
LWSLHVSLF	9	Unmodified	_LWSLHVSLF_					0	0	0			REV__nc|ENSG00000158941|Q8N163-2|CCAR2	REV__nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	551.30821	1100.60187	0.84125	0.00046379	5.732	0.0031601	6.5733	0.0036239	551.3118914983226	101.17	0.14522	101.17	101.06	101.2	0	-0.028833	0.001154	NaN	7.9102	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20040000	+		21431	10566	10591	10630							0.05558923719604536
LWSLHVSLF	9	Unmodified	_LWSLHVSLF_					0	0	0			REV__nc|ENSG00000158941|Q8N163-2|CCAR2	REV__nc|ENSG00000158941|Q8N163-2|CCAR2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	551.30821	1100.60187	2.7207	0.0014999	1.3361	0.0007366	4.0568	0.0022365	551.3101483449826	101.16	0.14822	101.22	101.09	101.24	0.067009	0.028833	-0.0036931	NaN	7.9102	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7763600	+		21432	10566	10591	10630							0.05558923719604536
LWSLVLIHGP	10	Unmodified	_LWSLVLIHGP_					0	0	0			REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3391601443291	2	567.837134	1133.65972	3.9561	0.0022464	-1.2153	-0.00069011	2.7408	0.0015563	567.8372843465104	86.887	0.33793	87.979	87.872	88.21	1.0918					19	11	2	0	0	0	0.38674	1	36655	36655		34.102	1.797	1	1670400	+		21433	12721	10592	10631	24506	24506					0.09823185645018384
LWSLVLIHGP	10	Unmodified	_LWSLVLIHGP_					0	0	0			REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	567.837134	1133.65972	3.9561	0.0022464	-1.2153	-0.00069011	2.7408	0.0015563	567.8372843465104	86.887	0.33793	87.979	87.872	88.21	1.0918	0.0037853	0.0013814	NaN	34.102	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1670400	+		21434	12721	10592	10631							0.09823185645018384
LWSLVLIHGP	10	Unmodified	_LWSLVLIHGP_					0	0	0			REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	REV__ENST00000376334.3_1_9:68455190-68455343:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	567.837134	1133.65972	4.2099	0.0023906	-3.0311	-0.0017212	1.1788	0.00066936	567.8354080836176	86.425	0.29298	87.972	87.797	88.09	1.547	-0.0037853	-0.00068075	NaN	34.102	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1318000	+		21435	12721	10592	10631							0.09823185645018384
LWTWAWCQW	9	Unmodified	_LWTWAWCQW_					0	0	0			REV__ENST00000575531.5_1_16:4409488-4409596:-|nuORF	REV__ENST00000575531.5_1_16:4409488-4409596:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.1976806521416	3	427.195421	1278.56443	4.1698	0.0017813	-0.35747	-0.00015271	3.8123	0.0016286	427.5299888214743	91.167	0.47475	92.149	91.942	92.417	0.98157					25	14	2	0	0	0	0.76456	1	38445	38445		2.7352	0	1	3103200	+		21436	13981	10593	10632	24507	24507					-0.06370490817653263
LWVGIIIPWI	10	Unmodified	_LWVGIIIPWI_					0	0	0			REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	REV__tr|A0A7D6VS53|A0A7D6VS53_9CLOTDUF1576domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04380PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1899902224541	4	303.190314	1208.73215	-0.14322	-4.3423E-05	-1.9601	-0.00059427	-2.1033	-0.0006377	303.18921327321283	27.224	0.638	28.496	28.321	28.959	1.2715					66	20	4	0	0	0	0.89803	1	11458	11458		0.77653	0.078866	1	2612000	+		21437	15435	10594	10633	24508	24508					0.13613519718614953
LWWKCEHHSL	10	Unmodified	_LWWKCEHHSL_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75;LY75|p.S1527*|1|0.06|ENSG00000054219|chr2:159810645-159810645|G/-|frameshift_variant;nc|ENSG00000054219|O60449-3|LY75;ENST00000484559.1_1_2:160728960-160761235:-|nuORF	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	669.8273803591728	2	669.824232	1337.63391	2.5554	0.0017117	1.6692	0.001118	4.2246	0.0028297	669.8253327040132	89.983	0.41776	90.192	90.017	90.435	0.20904					25	12	3	0	0	0	0.80568	1	37714	37714		11.64	0	1	618410			21438	711	10595	10634	24509	24509					-0.02140031868884762
LWWKCEHHSL	10	Unmodified	_LWWKCEHHSL_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75;LY75|p.S1527*|1|0.06|ENSG00000054219|chr2:159810645-159810645|G/-|frameshift_variant;nc|ENSG00000054219|O60449-3|LY75;ENST00000484559.1_1_2:160728960-160761235:-|nuORF	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MSMS	GG20161007_CRH_Patient100_W632_02	4	669.8278686404228	2	669.824232	1337.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.835	1	90.281	89.781	90.781	1.4467								0	0	0	0.65773	1	37432	37432		7.2892	1.0834	1				21439	711	10595	10634	24510	24510					-0.02140031868884762
LWWKCEHHSL	10	Unmodified	_LWWKCEHHSL_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75;LY75|p.S1527*|1|0.06|ENSG00000054219|chr2:159810645-159810645|G/-|frameshift_variant;nc|ENSG00000054219|O60449-3|LY75;ENST00000484559.1_1_2:160728960-160761235:-|nuORF	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	669.824232	1337.63391	2.5025	0.0016762	1.4968	0.0010026	3.9993	0.0026788	669.8250363042293	90.454	0.30235	90.454	90.256	90.558	0	0.131	-0.00017118	NaN	11.64	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	741050			21440	711	10595	10634							-0.02140031868884762
LWYKVKNKYR	10	Unmodified	_LWYKVKNKYR_					0	0	0			REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	466.6117736697197	3	466.60659	1396.79794	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.882	1	88.378	87.878	88.878	1.4953								0	0	0	0.6624	1	36629	36629		0.13989	0.056541	1		+		21441	15697	10596	10635	24511	24511					0.11541308893492896
LWYSRYRWMEP	11	Unmodified	_LWYSRYRWMEP_					0	0	0			REV__L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|171|3|anti-sense	REV__L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|171|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	793.8915893435478	2	793.882278	1585.75	2.3283	0.0018484	3.0905	0.0024535	5.4188	0.0043019	793.8844675846522	72.311	1.5002	74.121	73.831	75.331	1.8101					94	47	3	0	0	0	0.99329	1	30341	30341		4.1895	1.1943	1	23761000	+		21442	14347	10597	10636	24512	24512					-0.01944133088863964
LWYVWKKK	8	Unmodified	_LWYVWKKK_					0	0	0		tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8459350466728	2	575.84222	1149.66989	5.6627	0.0032608	0.86227	0.00049653	6.525	0.0037574	575.842589824387	88.985	0.41908	90.041	89.82	90.239	1.0562					24	12	3	0	0	0	0.88409	1	37486	37486		6.3541	1.1234	1	1627700			21443	16286	10598	10637	24513	24513					0.10103793370262792
LWYVWKKK	8	Unmodified	_LWYVWKKK_					0	0	0		tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	tr|A0A553SKD4|A0A553SKD4_NIACIMultifunctionalfusionproteinOS=NialliacirculansOX=1397GN=secDFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8445312380791	2	575.84222	1149.66989	4.6936	0.0027027	1.5606	0.00089866	6.2542	0.0036014	575.8428647640794	88.673	0.35363	90.119	89.953	90.306	1.4467					16	10	2	0	0	0	0.88409	1	37363	37363		6.3541	1.1234	1	1324800			21444	16286	10598	10637	24514	24514					0.10103793370262792
LYAASDAFFYF	11	Unmodified	_LYAASDAFFYF_					0	0	0		tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1	tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1	tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.8055908083916	2	657.805697	1313.59684	1.9712	0.0012967	-2.0049	-0.0013188	-0.03367	-2.2149E-05	657.8043693324522	68.32	0.35252	70.19	70.01	70.363	1.87					26	10	4	0	0	0	0.81656	2	28657	28657;28709		14.838	2.3939	1	2416500			21445	16230	10599	10638	24515;24516	24515					-0.04741424933695271
LYADVGGKQF	10	Unmodified	_LYADVGGKQF_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2857543826103	2	549.284931	1096.55531	0.41973	0.00023055	0.21345	0.00011724	0.63318	0.00034779	549.2851942446612	31.647	0.3077	32.928	32.773	33.08	1.2813					26	9	4	0	0	0	0.19357	1	13260	13260		129.77	58.639	1	7058400			21446	4558	10600	10639	24517	24517					0.010894390976773138
LYADVGGKQF	10	Unmodified	_LYADVGGKQF_					0	0	0		ENST00000485612.5_1_X:153061851-153063885:+|nuORF;ENSG00000180879|ENST00000370086|SSR4;ENST00000460616.5_1_X:153061851-153063636:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	ENST00000485612.5_1_X:153061851-153063885:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2849609255791	2	549.284931	1096.55531	0.80879	0.00044426	-0.24448	-0.00013429	0.56432	0.00030997	549.2849198125031	31.117	0.33174	32.941	32.744	33.075	1.8246					28	10	4	0	0	0	0.050359	2	13076	13022;13076		118.07	61.891	1	7187000			21447	4558	10600	10639	24518;24519	24519					0.010894390976773138
LYAKLVILCW	10	Unmodified	_LYAKLVILCW_					0	0	0		ENSG00000258453|ENST00000556246|OR11H2;ENSG00000130538|ENST00000643195|OR11H1;nc|ENSG00000258453|Q8NH07|OR11H2;nc|ENSG00000130538|Q8NG94|OR11H1	ENSG00000258453|ENST00000556246|OR11H2	ENSG00000258453|ENST00000556246|OR11H2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3572875857353	2	611.356845	1220.69914	2.531	0.0015474	-0.40618	-0.00024832	2.1248	0.001299	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.89646	1	33199	33199		1.8442	0	1	7141600			21448	2440	10601	10640	24520	24520					0.09761569604256692
LYANMFERL	9	Oxidation (M)	_LYANM(Oxidation (M))FERL_		LYANM(1)FERL		LYANM(58)FERL	0	0	1		ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.7925292849541	2	586.792066	1171.56958	2.331	0.0013678	-2.1914	-0.0012859	0.13956	8.1891E-05	586.7914365261239	40.559	0.34363	41.869	41.725	42.069	1.3102					31	10	4	0	0	0	0.075994	1	17027	17027		57.722	14.754	1	3861000			21449	470	10602	10641	24521	24521		4			-0.009342317456912497
LYANMFERL	9	Oxidation (M)	_LYANM(Oxidation (M))FERL_		LYANM(1)FERL		LYANM(42)FERL	0	0	1		ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7932006716728	2	586.792066	1171.56958	1.9466	0.0011422	-1.2212	-0.00071662	0.72535	0.00042563	586.7917569732715	40.158	0.33885	42.02	41.862	42.201	1.8624					30	10	4	0	0	0	0.12216	1	16849	16849		41.956	7.7682	1	2974500			21450	470	10602	10641	24522	24522		4			-0.009342317456912497
LYANMFERL	9	Unmodified	_LYANMFERL_					0	0	0		ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.7952758669853	2	578.794609	1155.57467	1.4981	0.00086709	-0.81719	-0.00047298	0.68091	0.00039411	578.7939970459686	56.733	0.49078	58.148	57.847	58.338	1.4145					38	15	3	0	0	0	0.0069529	4	23774	23724;23774;23813;23852		114.65	72.701	1	52452000			21451	470	10602	10642	24523;24524;24525;24526	24524					0.003100721169175813
LYANMFERL	9	Unmodified	_LYANMFERL_					0	0	0		ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	ENSG00000004478|ENST00000001008|FKBP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.7952758669853	2	578.794609	1155.57467	1.1481	0.00066451	-0.10405	-6.0221E-05	1.0441	0.00060429	578.7946229022494	56.164	0.46218	58.133	57.811	58.273	1.9684					36	14	3	0	0	0	0.0049178	3	23506	23506;23555;23594		122.18	80.34	1	43905000			21452	470	10602	10642	24527;24528;24529	24527					0.003100721169175813
LYCLRPQT	8	Unmodified	_LYCLRPQT_					0	0	0			REV__nc|ENSG00000215859|A8MUH7-2|PDZK1P1	REV__nc|ENSG00000215859|A8MUH7-2|PDZK1P1	MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2634155154228	2	497.262945	992.511337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.12	1	29.399	28.899	29.899	1.2789								0	0	0	1.0178	1	11786	11786		2.3027	0	1		+		21453	11134	10603	10643	24530	24530					0.014781313996763856
LYDFFLACH	9	Unmodified	_LYDFFLACH_					0	0	0		nc|ENSG00000125875|Q96BZ9-3|TBC1D20;ENSG00000125875|ENST00000354200|TBC1D20;ENST00000494633.1_1_20:419232-422368:-|nuORF	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	nc|ENSG00000125875|Q96BZ9-3|TBC1D20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.8437072634697	3	376.844277	1127.511	2.426	0.00091423	-2.446	-0.00092175	-0.01994	-7.5144E-06	376.84326374231165	74.527	0.32712	75.845	75.681	76.008	1.318					19	10	2	0	0	0	0.66839	1	31288	31288		5.2969	0	1	2284400			21454	2288	10604	10644	24531	24531					-0.04765288320163563
LYDIILKNF	9	Unmodified	_LYDIILKNF_					0	0	0		ENSG00000092010|ENST00000206451|PSME1	ENSG00000092010|ENST00000206451|PSME1	ENSG00000092010|ENST00000206451|PSME1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8309203982353	2	569.828975	1137.6434	2.2407	0.0012768	0.22902	0.0001305	2.4697	0.0014073	569.8291820016516	68.522	1.0113	69.888	69.662	70.674	1.3657					82	32	5	0	0	0	3.7622E-05	4	28697	28697;28743;28782;28821		158.2	69.299	1	92147000			21455	1157	10605	10645	24532;24533;24534;24535	24532					0.08008059688290814
LYDIILKNF	9	Unmodified	_LYDIILKNF_					0	0	0		ENSG00000092010|ENST00000206451|PSME1	ENSG00000092010|ENST00000206451|PSME1	ENSG00000092010|ENST00000206451|PSME1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8303710818291	2	569.828975	1137.6434	2.2903	0.0013051	0.37336	0.00021275	2.6637	0.0015178	569.8291999557387	67.973	0.90483	69.843	69.58	70.485	1.87					84	28	5	0	0	0	1.1665E-10	5	28494	28457;28494;28533;28572;28618		205.78	98.591	1	92584000			21456	1157	10605	10645	24536;24537;24538;24539;24540	24537					0.08008059688290814
LYDKMAKQL	9	Unmodified	_LYDKMAKQL_					0	0	0			REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	REV__nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.8121826052666	2	555.30481	1108.59507	1.5559	0.00086399	-0.31742	-0.00017626	1.2385	0.00068773	555.3039946766401	46.404	0.27832	48.374	48.251	48.529	1.9703					11	8	2	0	0	0	0.11463	1	19433	19433		12.532	0.89125	1	457250	+		21457	10236	10606	10646	24541	24541					0.04511242776743529
LYDMWIKQV	9	Unmodified	_LYDMWIKQV_					0	0	0			REV__ENSG00000133858|ENST00000378743|ZFC3H1	REV__ENSG00000133858|ENST00000378743|ZFC3H1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.3126098513603	2	598.312635	1194.61072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.791	1	58.791	58.291	59.291	0								0	0	0	0.40883	1	24518	24518		7.9102	0	1		+		21458	9886	10607	10647	24542	24542					0.021195292937591148
LYDPVISKL	9	Unmodified	_LYDPVISKL_					0	0	0		nc|ENSG00000187778|Q96EZ8-3|MCRS1;ENSG00000187778|ENST00000343810|MCRS1;nc|ENSG00000187778|Q96EZ8-2|MCRS1	nc|ENSG00000187778|Q96EZ8-3|MCRS1	nc|ENSG00000187778|Q96EZ8-3|MCRS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3091308474541	2	524.307875	1046.6012	2.015	0.0010565	2.6765	0.0014033	4.6915	0.0024598	524.3086546897082	49.42	0.40005	50.811	50.58	50.98	1.3911					49	12	5	0	0	0	0.050451	2	20692	20642;20692		67.838	23.241	1	15251000			21459	4839	10608	10648	24543;24544	24544					0.07976084279880524
LYDRYEKPLFI	11	Unmodified	_LYDRYEKPLFI_					0	0	0		tr|A0A7D6VNI3|A0A7D6VNI3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12735PE=3SV=1;tr|A0A553SRH6|A0A553SRH6_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_01040PE=3SV=1	tr|A0A7D6VNI3|A0A7D6VNI3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12735PE=3SV=1	tr|A0A7D6VNI3|A0A7D6VNI3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12735PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	729.3958007693291	2	728.895377	1455.7762	1.1668	0.00085045	-2.7969	-0.0020387	-1.6302	-0.0011882	728.8927078120593	54.561	0.35003	56.53	56.318	56.668	1.9684					27	11	3	0	0	0	0.90941	1	22845	22845		16.149	9.0474	1	2436200			21460	16559	10609	10649	24545	24545					0.06654459354263054
LYDSLRNLF	9	Unmodified	_LYDSLRNLF_					0	0	0			REV__ENST00000537496.5_1_12:109994835-109999125:-|nuORF	REV__ENST00000537496.5_1_12:109994835-109999125:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8057128787041	2	570.806031	1139.59751	0.54343	0.00031019	-0.73463	-0.00041933	-0.1912	-0.00010914	570.8056082720823	57.313	0.2799	59.281	59.166	59.446	1.9684					27	18	2	0	0	0	0.22154	1	24067	24067		30.637	9.0996	1	7504800	+		21461	10103	10610	10650	24546	24546					0.0332941450603812
LYDVIRGGQI	10	Unmodified	_LYDVIRGGQI_					0	0	0			REV__ENSG00000145555|ENST00000513610|MYO10	REV__ENSG00000145555|ENST00000513610|MYO10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8207885622978	2	567.319306	1132.62406	1.9563	0.0011099	-1.3109	-0.00074368	0.64547	0.00036619	567.8197841422124	48.044	0.44001	49.432	49.178	49.618	1.388					35	13	3	0	0	0	0.70618	1	20061	20061		18.146	0.011366	1	3935100	+		21462	10274	10611	10651	24547	24547					0.06305103397380662
LYDYDLDSDT	10	Unmodified	_LYDYDLDSDT_					0	0	0			REV__ENST00000394156.7_2_16:64981508-64982584:-|nuORF	REV__ENST00000394156.7_2_16:64981508-64982584:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.2532226443291	2	610.253691	1218.49283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.854	1	11.616	11.116	12.116	0.76165								0	0	0	0.65894	1	4511	4511		6.2058	1.3088	1		+		21463	10134	10612	10652	24548	24548					-0.10767796551863285
LYDYYMGPKE	10	Unmodified	_LYDYYMGPKE_					0	0	0		nc|ENSG00000158055|Q8TE85-3|GRHL3;ENSG00000158055|ENST00000361548|GRHL3;nc|ENSG00000158055|Q8TE85-2|GRHL3;nc|ENSG00000158055|Q8TE85|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	nc|ENSG00000158055|Q8TE85-3|GRHL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	639.7891723513603	2	639.789189	1277.56383	4.2442	0.0027154	-3.6781	-0.0023532	0.56606	0.00036216	639.7867930184675	90.092	0.41367	91.112	90.926	91.34	1.0199					22	12	2	0	0	0	0.75645	1	37980	37980		15.847	1.0089	1	1484700			21464	3490	10613	10653	24549	24549					-0.0638537504805754
LYEEAFTVF	9	Unmodified	_LYEEAFTVF_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1118.542529284954	1	1118.54045	1117.53318	2.1038	0.0023532	0.024481	2.7383E-05	2.1283	0.0023806	1118.540907552437	75.993	0.39154	77.286	77.038	77.43	1.2938					29	12	3	0	0	0	0.19075	1	31871	31871		34.102	7.2188	1	3831300			21465	851	10614	10654	24550	24550					-0.02088785370756341
LYEEAFTVF	9	Unmodified	_LYEEAFTVF_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1118.542529284954	1	1118.54045	1117.53318	2.6925	0.0030117	-0.25417	-0.0002843	2.4384	0.0027274	1118.5406192514608	75.457	0.33394	77.238	77.072	77.406	1.7817					27	10	3	0	0	0	0.069258	2	31658	31610;31658		60.39	24.263	1	3765400			21466	851	10614	10654	24551;24552	24552					-0.02088785370756341
LYEEAFTVF	9	Unmodified	_LYEEAFTVF_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.7762328982353	2	559.773865	1117.53318	2.7053	0.0015144	-4.3179	-0.002417	-1.6126	-0.00090267	559.7738482283415	75.503	0.3943	77.285	77.04	77.434	1.7817					30	12	3	0	0	0	0.24063	1	31633	31633		28.487	10.352	1	7257400			21467	851	10614	10654	24553	24553					-0.02088785370756341
LYEEAFTVF	9	Unmodified	_LYEEAFTVF_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	559.773865	1117.53318	2.5246	0.0014132	-6.0748	-0.0034005	-3.5502	-0.0019873	559.7742356081283	75.975	0.48248	77.269	77.006	77.488	1.2938	-0.0079488	-0.0010798	NaN	28.487	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6308000			21468	851	10614	10654							-0.02088785370756341
LYEEINQVF	9	Unmodified	_LYEEINQVF_					0	0	0		nc|ENSG00000119004|Q6UW02-2|CYP20A1;ENSG00000119004|ENST00000356079|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.7895385622978	2	577.790047	1153.56554	2.8005	0.0016181	-1.2215	-0.00070576	1.579	0.00091233	577.7885002908647	61.86	0.31397	63.278	63.113	63.427	1.4177					21	9	4	0	0	0	0.27148	1	25972	25972		26.884	15.243	1	782970			21469	2056	10615	10655	24554	24554					-0.0050999796776523
LYEEINQVF	9	Unmodified	_LYEEINQVF_					0	0	0		nc|ENSG00000119004|Q6UW02-2|CYP20A1;ENSG00000119004|ENST00000356079|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	nc|ENSG00000119004|Q6UW02-2|CYP20A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7894164919853	2	577.790047	1153.56554	2.1259	0.0012283	-0.030633	-1.77E-05	2.0952	0.0012106	577.789468120076	61.301	0.25428	63.258	63.179	63.433	1.9571					12	7	2	0	0	0	0.27148	1	25747	25747		26.884	16.06	1	948450			21470	2056	10615	10655	24555	24555					-0.0050999796776523
LYEKDIQLF	9	Unmodified	_LYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8179199099541	2	584.816064	1167.61758	0.77982	0.00045605	2.0856	0.0012197	2.8654	0.0016757	584.8175018294422	52.834	0.3845	54.235	54.057	54.442	1.4005					26	11	3	0	0	0	0.047853	2	22094	22094;22146		75.761	7.6801	1	5180300			21471	3939	10616	10656	24556;24557	24556					0.04047165445990686
LYEKDIQLF	9	Unmodified	_LYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8171264529228	2	584.816064	1167.61758	1.2674	0.00074119	0.9174	0.00053651	2.1848	0.0012777	584.8167027854654	52.273	0.43251	54.245	54.047	54.48	1.9722					29	13	3	0	0	0	0.056421	2	21907	21861;21907		71.922	7.686	1	5595400			21472	3939	10616	10656	24558;24559	24559					0.04047165445990686
LYELHVFTF	9	Unmodified	_LYELHVFTF_					0	0	0		nc|ENSG00000060069|Q9Y5B0-4|CTDP1;ENSG00000060069|ENST00000613122|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8069335818291	2	584.8055	1167.59645	3.4867	0.002039	3.4039	0.0019906	6.8906	0.0040296	584.805370591712	73.836	0.71967	75.154	74.623	75.342	1.318					69	22	4	0	0	0	0.0066739	1	30973	30973		115.69	62.116	1	6107000			21473	743	10617	10657	24560	24560					0.0193520013710895
LYELHVFTF	9	Unmodified	_LYELHVFTF_					0	0	0		nc|ENSG00000060069|Q9Y5B0-4|CTDP1;ENSG00000060069|ENST00000613122|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	nc|ENSG00000060069|Q9Y5B0-4|CTDP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8068725466728	2	584.8055	1167.59645	2.561	0.0014977	1.4843	0.00086805	4.0454	0.0023658	584.8054397656654	73.289	0.66109	75.099	74.639	75.3	1.8101					28	20	2	0	0	0	0.0092758	1	30727	30727		108	50.526	1	4820800			21474	743	10617	10657	24561	24561					0.0193520013710895
LYELLSGVLL	10	Unmodified	_LYELLSGVLL_					0	0	0		ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3383056521416	2	560.336633	1118.65871	1.2594	0.00070567	0.96336	0.0005398	2.2227	0.0012455	560.3375525954477	66.237	0.55012	66.237	66.058	66.608	0					22	16	2	0	0	0	0.51515	1	27628	27628		26.884	0	1	714890			21475	3047	10618	10658	24562	24562					0.1041292648549188
LYELLSGVLL	10	Unmodified	_LYELLSGVLL_					0	0	0		ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	ENSG00000143669|ENST00000389793|LYST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3390991091728	2	560.336633	1118.65871	1.8532	0.0010384	0.19934	0.0001117	2.0525	0.0011501	560.3369318831784	65.774	0.56785	66.101	65.77	66.338	0.32689					29	17	3	0	0	0	0.6819	1	27523	27523		19.257	0	1	801330			21476	3047	10618	10658	24563	24563					0.1041292648549188
LYENKEIFL	9	Unmodified	_LYENKEIFL_					0	0	0		ENST00000559111.1_1_15:99797871-99798159:+|nuORF	ENST00000559111.1_1_15:99797871-99798159:+|nuORF	ENST00000559111.1_1_15:99797871-99798159:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8179199099541	2	584.816064	1167.61758	1.2674	0.00074119	0.9174	0.00053651	2.1848	0.0012777	584.8167027854654	52.273	0.43251	54.245	54.047	54.48	1.9722					29	13	3	0	0	0	0.12216	1	21962	21962		54.774	4.8406	1	5595400			21477	7320	10619	10659	24564	24564					0.04047165445990686
LYERCAHTP	9	Unmodified	_LYERCAHTP_					0	0	0			REV__ENSG00000129167|ENST00000682019|TPH1	REV__ENSG00000129167|ENST00000682019|TPH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2537414431572	3	363.843048	1088.50731	1.9523	0.00071034	-2.2904	-0.00083336	-0.3381	-0.00012301	363.8429136615203	68.004	0.49821	69.874	69.736	70.234	1.87					17	15	2	0	0	0	0.11908	1	28578	28578		0	0	1	353350	+		21478	9748	10620	10660	24565	24565					-0.033399580940340456
LYFESVRTF	9	Unmodified	_LYFESVRTF_					0	0	0		ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3010742068291	2	581.300581	1160.58661	0.87881	0.00051085	-1.1226	-0.00065254	-0.24374	-0.00014169	581.2999719635857	52.58	0.2489	53.976	53.804	54.053	1.3966					14	7	3	0	0	0	0.16939	1	22023	22023		36.506	11.107	1	1491400			21479	3433	10621	10661	24566	24566					0.012740121317619924
LYFESVRTF	9	Unmodified	_LYFESVRTF_					0	0	0		ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	ENSG00000155957|ENST00000358230|TMBIM4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	581.300581	1160.58661	1.2948	0.00075267	-0.74391	-0.00043244	0.55088	0.00032023	581.8010652673356	51.997	0.27898	53.969	53.799	54.078	1.9722	-0.0037527	0.00020516	NaN	36.506	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1525700			21480	3433	10621	10661							0.012740121317619924
LYFFAARLRLS	11	Unmodified	_LYFFAARLRLS_					0	0	0			REV__ENSG00000188582|ENST00000340634|PAQR9	REV__ENSG00000188582|ENST00000340634|PAQR9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.9331237673759	3	452.931073	1355.77139	2.5479	0.001154	-0.051604	-2.3373E-05	2.4963	0.0011307	452.9306368507401	47.65	0.25301	49.033	48.858	49.111	1.3825					13	7	3	0	0	0	1.0372	1	19945	19945		1.0136	0.16863	1	1174500	+		21481	11575	10622	10662	24567	24567					0.10773620002169082
LYFIVFPGF	9	Unmodified	_LYFIVFPGF_					0	0	0			REV__ENSG00000071189|ENST00000428135|SNX13	REV__ENSG00000071189|ENST00000428135|SNX13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8073608279228	2	551.802229	1101.5899	2.0123	0.0011104	-1.7609	-0.00097169	0.25134	0.00013869	551.8010106858909	68.387	0.84505	70.257	69.611	70.456	1.87					63	26	4	0	0	0	0.51832	1	28708	28708		14.582	2.0501	1	3673900	+		21482	8723	10623	10663	24568	24568					0.04317306976417967
LYFLMWFQ	8	Unmodified	_LYFLMWFQ_					0	0	0		ENST00000411991.5_1_2:103340290-103347510:-|nuORF	ENST00000411991.5_1_2:103340290-103347510:-|nuORF	ENST00000411991.5_1_2:103340290-103347510:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	574.2859985232353	2	574.285889	1146.55722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.73	1	56.135	55.635	56.635	1.4048								0	0	0	1.0178	1	22904	22904		13.508	2.3934	1				21483	6386	10624	10664	24569	24569					-0.010192234180749438
LYFLMWFQ	8	Unmodified	_LYFLMWFQ_					0	0	0		ENST00000411991.5_1_2:103340290-103347510:-|nuORF	ENST00000411991.5_1_2:103340290-103347510:-|nuORF	ENST00000411991.5_1_2:103340290-103347510:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	574.2865478396416	2	574.285889	1146.55722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.202	1	56.17	55.67	56.67	1.9684								0	0	0	1.0178	1	22705	22705		13.508	0.97634	1				21484	6386	10624	10664	24570	24570					-0.010192234180749438
LYFNYVLQF	9	Unmodified	_LYFNYVLQF_					0	0	0			REV__ENSG00000168263|ENST00000382082|KCNV2	REV__ENSG00000168263|ENST00000382082|KCNV2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3149902224541	2	603.813325	1205.6121	3.8872	0.0023472	-3.1532	-0.0019039	0.73405	0.00044323	603.811565424065	96.257	0.30789	96.678	96.572	96.88	0.4212					15	9	3	0	0	0	0.44535	1	40498	40498		18.135	1.0221	1	3583400	+		21485	10901	10625	10665	24571	24571					0.017514866541887386
LYFNYVLQF	9	Unmodified	_LYFNYVLQF_					0	0	0			REV__ENSG00000168263|ENST00000382082|KCNV2	REV__ENSG00000168263|ENST00000382082|KCNV2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	603.813325	1205.6121	3.8872	0.0023472	-3.1532	-0.0019039	0.73405	0.00044323	603.811565424065	96.257	0.30789	96.678	96.572	96.88	0.4212	0.11602	-0.0019695	NaN	18.135	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3583400	+		21486	10901	10625	10665							0.017514866541887386
LYGIQNDSYF	10	Unmodified	_LYGIQNDSYF_					0	0	0			REV__tr|A0A7D6VVT8|A0A7D6VVT8_9CLOTDUF4116domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06385PE=4SV=1	REV__tr|A0A7D6VVT8|A0A7D6VVT8_9CLOTDUF4116domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.2842895388603	2	610.285128	1218.5557	2.3993	0.0014643	-1.8009	-0.0010991	0.59846	0.00036523	610.2827558779809	58.933	0.40966	60.902	60.753	61.162	1.969					30	12	3	0	0	0	0.72878	1	24764	24764		17.113	3.2068	1	1282500	+		21487	15538	10626	10666	24572	24572					-0.044831859731630175
LYGKSLYSF	9	Unmodified	_LYGKSLYSF_					0	0	0		ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4;ENSG00000196975|ENST00000394295|ANXA4	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2862426638603	2	539.2844	1076.55425	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.67	1	45.024	44.524	45.524	1.3536								0	0	0	0.30476	1	18309	18309		18.146	1.0598	1				21488	4973	10627	10667	24573	24573					0.01903224728744135
LYGQNTLVL	9	Unmodified	_LYGQNTLVL_					0	0	0			REV__ENST00000436315.2_1_9:71224362-71225004:+|nuORF	REV__ENST00000436315.2_1_9:71224362-71225004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7907592654228	2	510.78985	1019.56515	2.0964	0.0010708	-3.5377	-0.001807	-1.4413	-0.0007362	511.2883352540616	49.149	0.68213	51.126	50.73	51.412	1.9772					47	21	3	0	0	0	0.49082	1	20655	20655		15.847	0	1	4078800	+		21489	13051	10628	10668	24574	24574					0.056146271030456774
LYGSHLYVW	9	Unmodified	_LYGSHLYVW_					0	0	0		ENST00000474352.5_1_1:151338696-151341653:-|nuORF;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;SELENBP1|p.V361Sfs*40|1|0.21|ENSG00000143416|chr1:151365199-151365245|AGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCTCCAGCACTTGCAC/-|frameshift_variant;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;ENSG00000143416|ENST00000368868|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2907592654228	2	569.290017	1136.56548	1.5836	0.0009015	-3.8538	-0.0021939	-2.2703	-0.0012924	569.2892937537513	54.054	0.3228	55.459	55.291	55.613	1.4048					14	10	2	0	0	0	0.46905	1	22641	22641		16.942	4.7016	1	861100			21490	3031	10629	10669	24575	24575					0.0026604682288962067
LYHEDHPQL	9	Unmodified	_LYHEDHPQL_					0	0	0		ENSG00000128815|ENST00000325239|WDFY4;nc|ENSG00000128815|Q6ZS81-3|WDFY4;nc|ENSG00000128815|Q6ZS81-5|WDFY4;nc|ENSG00000128815|Q6ZS81-4|WDFY4	ENSG00000128815|ENST00000325239|WDFY4	ENSG00000128815|ENST00000325239|WDFY4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2795287966728	2	576.277638	1150.54072	1.6141	0.00093016	1.562	0.00090012	3.176	0.0018303	576.2790600702901	84.319	0.24857	85.478	85.31	85.559	1.159					12	7	2	0	0	0	0.27148	1	35390	35390		26.884	3.7352	1	2288100			21491	2384	10630	10670	24576	24576					-0.028526330504973885
LYHIALFLE	9	Unmodified	_LYHIALFLE_					0	0	0		ENST00000554644.1_1_14:93723510-93760888:-|nuORF;nc|ENSG00000011114|Q9P203-3|BTBD7;ENSG00000011114|ENST00000334746|BTBD7	ENST00000554644.1_1_14:93723510-93760888:-|nuORF	ENST00000554644.1_1_14:93723510-93760888:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8153564333916	2	559.815867	1117.61718	2.9015	0.0016243	-1.4725	-0.00082432	1.429	0.00079998	559.8144835945361	74.402	0.34955	76.198	75.989	76.339	1.7962					28	10	3	0	0	0	0.28226	1	31207	31207		26.341	0	1	1523700			21492	563	10631	10671	24577	24577					0.06307790516802925
LYHMLFELF	9	Unmodified	_LYHMLFELF_					0	0	0		ENST00000512204.5_1_17:48185497-48187458:+|nuORF;nc|ENSG00000005882|Q15119-2|PDK2;ENSG00000005882|ENST00000503176|PDK2;ENST00000506647.1_1_17:48185497-48185632:+|nuORF	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	ENST00000512204.5_1_17:48185497-48187458:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	606.3097411990166	2	606.809728	1211.6049	4.6818	0.0028409	1.905	0.001156	6.5868	0.0039969	606.8097759845256	88.055	0.22481	89.501	89.38	89.604	1.4467					9	6	2	0	0	0	0.099861	1	37134	37134		14.582	0	1	940120			21493	495	10632	10672	24578	24578					0.00756430782098505
LYIDFGGKF	9	Unmodified	_LYIDFGGKF_					0	0	0		ENST00000522987.1_1_8:80870573-80942483:-|nuORF;ENSG00000147586|ENST00000276585|MRPS28	ENST00000522987.1_1_8:80870573-80942483:-|nuORF	ENST00000522987.1_1_8:80870573-80942483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2799560427666	2	530.279118	1058.54368	2.8907	0.0015329	-1.3374	-0.00070921	1.5533	0.00082367	530.2781398169195	62.08	0.41248	63.498	63.303	63.715	1.4177					29	12	3	0	0	0	0.057024	2	26056	26008;26056		65.235	27.261	1	4554700			21494	3186	10633	10673	24579;24580	24580					0.01675242074338712
LYIDFGGKF	9	Unmodified	_LYIDFGGKF_					0	0	0		ENST00000522987.1_1_8:80870573-80942483:-|nuORF;ENSG00000147586|ENST00000276585|MRPS28	ENST00000522987.1_1_8:80870573-80942483:-|nuORF	ENST00000522987.1_1_8:80870573-80942483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2802001833916	2	530.279118	1058.54368	2.5618	0.0013584	-1.4386	-0.00076288	1.1231	0.00059556	530.2779133068296	61.572	0.38395	63.529	63.305	63.689	1.9571					27	10	3	0	0	0	0.057024	2	25833	25785;25833		65.235	27.261	1	5299500			21495	3186	10633	10673	24581;24582	24582					0.01675242074338712
LYIFWHFL	8	Unmodified	_LYIFWHFL_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.8096801638603	2	569.807845	1137.60114	1.846	0.0010519	1.8911	0.0010776	3.7372	0.0021295	569.8092121825375	60.427	0.28317	60.427	60.257	60.541	0					12	8	2	0	0	0	0.88409	1	25213	25213		6.3541	0	1	819720	+		21496	14325	10634	10674	24583	24583					0.037841290705500796
LYIFWHFL	8	Unmodified	_LYIFWHFL_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.8098632693291	2	569.807845	1137.60114	2.1918	0.0012489	1.0713	0.00061043	3.2631	0.0018593	569.808706142542	59.885	0.23412	60.213	60.061	60.295	0.32809					14	7	3	0	0	0	0.88409	1	25086	25086		6.3541	0	1	812410	+		21497	14325	10634	10674	24584	24584					0.037841290705500796
LYIFWHFL	8	Unmodified	_LYIFWHFL_					0	0	0			REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	REV__L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|192|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8087036013603	2	569.807845	1137.60114	1.5674	0.00089314	1.3851	0.00078924	2.9525	0.0016824	570.3099105640553	58.766	0.31678	60.184	59.972	60.289	1.4181					18	9	3	0	0	0	0.88409	1	24659	24659		6.3541	0	1	1626600	+		21498	14325	10634	10674	24585	24585					0.037841290705500796
LYIGAYLIP	9	Unmodified	_LYIGAYLIP_					0	0	0			REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8033325076103	2	511.799686	1021.58482	3.6553	0.0018708	2.9291	0.0014991	6.5844	0.0033699	511.8012079453195	93.093	0.54142	94.37	94.038	94.58	1.277					53	16	4	0	0	0	0.39097	1	39095	39095		20.871	5.024	1	5602300	+		21499	14720	10635	10675	24586	24586					0.07489003113801118
LYIGAYLIP	9	Unmodified	_LYIGAYLIP_					0	0	0			REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	REV__tr|A0A553SFT6|A0A553SFT6_NIACIYhgE/Pipdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8030273318291	2	511.799686	1021.58482	3.6544	0.0018703	2.4148	0.0012359	6.0693	0.0031063	511.80104841438896	93.511	0.49431	94.788	94.58	95.074	1.277					46	15	4	0	0	0	0.64949	1	39447	39447		9.3474	0.75416	1	4601100	+		21500	14720	10635	10675	24587	24587					0.07489003113801118
LYIGHLTTL	9	Unmodified	_LYIGHLTTL_					0	0	0		nc|ENSG00000082805|Q8IUD2-3|ERC1;ENSG00000082805|ENST00000360905|ERC1;WNK1-ERC1|2|fusion;SIPA1L3-ERC1|2|fusion;ENST00000542302.6_1_12:1519571-1599393:+|nuORF;WNK1-ERC1|5|fusion;WNK1-ERC1|4|fusion;WNK1-ERC1|3|fusion;WNK1-ERC1|1|fusion;SIPA1L3-ERC1|1|fusion	nc|ENSG00000082805|Q8IUD2-3|ERC1	nc|ENSG00000082805|Q8IUD2-3|ERC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8026611208916	2	515.800217	1029.58588	1.1743	0.00060572	1.5705	0.00081005	2.7448	0.0014158	515.800805362597	51.708	0.24612	53.68	53.585	53.831	1.9722					12	7	2	0	0	0	0.033521	1	21679	21679		81.864	28.288	1	1302400			21501	7833	10636	10676	24588	24588					0.07227217482704873
LYIGHLTTL	9	Unmodified	_LYIGHLTTL_					0	0	0		nc|ENSG00000082805|Q8IUD2-3|ERC1;ENSG00000082805|ENST00000360905|ERC1;WNK1-ERC1|2|fusion;SIPA1L3-ERC1|2|fusion;ENST00000542302.6_1_12:1519571-1599393:+|nuORF;WNK1-ERC1|5|fusion;WNK1-ERC1|4|fusion;WNK1-ERC1|3|fusion;WNK1-ERC1|1|fusion;SIPA1L3-ERC1|1|fusion	nc|ENSG00000082805|Q8IUD2-3|ERC1	nc|ENSG00000082805|Q8IUD2-3|ERC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.800217	1029.58588	1.3106	0.00067602	0.61792	0.00031872	1.9285	0.00099474	515.8005770252986	52.331	0.2154	53.728	53.62	53.836	1.3966	0.023744	-0.00031235	NaN	81.864	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1599600			21502	7833	10636	10676							0.07227217482704873
LYIGNLTWW	9	Unmodified	_LYIGNLTWW_					0	0	0		ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;ENST00000550987.5_1_12:69633426-69648902:+|nuORF;ENST00000547486.1_1_12:69645004-69651771:+|nuORF;nc|ENSG00000111605|Q16630-3|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3087036013603	2	583.305667	1164.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.214	1	95.403	94.903	95.903	1.1887								0	0	0	0.39421	1	39638	39638		9.3474	2.6243	1				21503	1744	10637	10677	24589	24589					0.021066198569769767
LYIGWDKHYGF	11	Unmodified	_LYIGWDKHYGF_					0	0	0		ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2355224490166	3	466.89955	1397.67682	1.7904	0.00083595	0.27885	0.0001302	2.0693	0.00096615	466.8994264016297	54.762	1.0399	56.166	55.835	56.874	1.4048					99	34	5	0	0	0	0.0736	3	22870	22870;22920;23012		43.477	33.162	1	36591000			21504	661	10638	10678	24590;24591;24592	24590					-0.006109385398303857
LYIGWDKHYGF	11	Unmodified	_LYIGWDKHYGF_					0	0	0		ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	700.3468505740166	2	699.845687	1397.67682	1.1909	0.00083346	0.55023	0.00038507	1.7412	0.0012185	699.8462439898141	54.757	0.53459	56.162	55.964	56.499	1.4048					39	17	3	0	0	0	0.030359	2	22898	22898;22954		79.596	53.328	1	3916300			21505	661	10638	10678	24593;24594	24593					-0.006109385398303857
LYIGWDKHYGF	11	Unmodified	_LYIGWDKHYGF_					0	0	0		ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.9014465212822	3	466.89955	1397.67682	2.2465	0.0010489	0.074406	3.474E-05	2.3209	0.0010836	466.89932150778003	54.321	0.98441	56.289	56.032	57.017	1.9684					98	32	5	0	0	0	0.0736	3	22686	22686;22776;22831		43.477	36.44	1	27463000			21506	661	10638	10678	24595;24596;24597	24595					-0.006109385398303857
LYIGWDKHYGF	11	Unmodified	_LYIGWDKHYGF_					0	0	0		ENST00000557929.5_1_15:78834269-78838932:+|nuORF;nc|ENSG00000041357|P25789-2|PSMA4;ENSG00000041357|ENST00000044462|PSMA4	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	ENST00000557929.5_1_15:78834269-78838932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	699.8470947146416	2	699.845687	1397.67682	1.3035	0.00091228	0.011276	7.8918E-06	1.3148	0.00092017	699.8456219179197	54.332	0.51891	56.301	56.064	56.583	1.9684					40	16	4	0	0	0	0.035876	3	22769	22719;22769;22823		74.2	45.118	1	3135000			21507	661	10638	10678	24598;24599;24600	24599					-0.006109385398303857
LYIIKVLKRN	10	Unmodified	_LYIIKVLKRN_					0	0	0		ENST00000493021.5_1_2:162567177-162757603:+|nuORF	ENST00000493021.5_1_2:162567177-162757603:+|nuORF	ENST00000493021.5_1_2:162567177-162757603:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	630.4133178591728	2	630.41354	1258.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.68	1	104.68	104.18	105.18	0								0	0	0	0.6624	1	44238	44238		0.40072	0.050084	1				21508	6922	10639	10679	24601	24601					0.19347381041666267
LYILDEKKIL	10	Unmodified	_LYILDEKKIL_					0	0	0			REV__ENSG00000145331|ENST00000394876|TRMT10A	REV__ENSG00000145331|ENST00000394876|TRMT10A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.3826171755791	2	624.384114	1246.75368	3.5752	0.0022323	-2.4037	-0.0015009	1.1715	0.00073147	624.3816971582778	96.456	0.124	96.741	96.682	96.806	0.28442					7	3	3	0	0	0	0.70643	1	40589	40589		18.135	0	1	2137100	+		21509	10271	10640	10680	24602	24602					0.14016859956655026
LYINMKSLVSW	11	Unmodified	_LYINMKSLVSW_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP;DSP|p.R1725Qfs*9|1|0.06|ENSG00000096696|chr6:7581363-7581364|-/A|frameshift_variant;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3672973513603	2	677.365398	1352.71624	2.1868	0.0014813	0.17161	0.00011624	2.3584	0.0015975	677.3659676334591	77.656	0.4382	78.937	78.76	79.198	1.2809					43	13	4	0	0	0	0.020781	2	32607	32559;32607		98.73	52.574	1	3664900			21510	1196;431	10641	10681	24603;24604	24604					0.05399445419379845
LYINMKSLVSW	11	Unmodified	_LYINMKSLVSW_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP;DSP|p.R1725Qfs*9|1|0.06|ENSG00000096696|chr6:7581363-7581364|-/A|frameshift_variant;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3671142458916	2	677.365398	1352.71624	1.0757	0.00072864	0.5125	0.00034715	1.5882	0.0010758	677.3659264274339	77.148	0.47945	78.899	78.688	79.167	1.7514					40	14	4	0	0	0	0.0054879	2	32373	32323;32373		111.31	59.894	1	4907600			21511	1196;431	10641	10681	24605;24606	24606					0.05399445419379845
LYIQTDHLFF	10	Unmodified	_LYIQTDHLFF_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000396136.6_1_15:58889748-58968450:-|nuORF	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.8359252810478	2	648.834788	1295.65502	2.6886	0.0017445	0.064293	4.1716E-05	2.7529	0.0017862	648.8339177624938	72.558	0.36816	73.888	73.732	74.101	1.3297					25	11	3	0	0	0	0.10014	1	30442	30442		63.961	34.879	1	2105000			21512	21	10642	10682	24607	24607					0.019022567116053324
LYIQTDHLFF	10	Unmodified	_LYIQTDHLFF_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000396136.6_1_15:58889748-58968450:-|nuORF	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.8370239138603	2	648.834788	1295.65502	2.7411	0.0017785	-1.1245	-0.00072959	1.6166	0.0010489	648.8339385221377	72.061	0.36357	73.885	73.756	74.119	1.824					24	11	3	0	0	0	0.054878	1	30230	30230		76.825	44.039	1	2678900			21513	21	10642	10682	24608	24608					0.019022567116053324
LYIVEPLKF	9	Unmodified	_LYIVEPLKF_					0	0	0		ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3362914919853	2	561.333893	1120.65323	2.006	0.0011261	-0.046185	-2.5925E-05	1.9599	0.0011001	561.3335592445021	69.207	0.79038	70.572	69.997	70.787	1.3657					83	25	5	0	0	0	0.029061	3	28983	28983;29031;29083		88.954	28.564	1	62852000			21514	1179	10643	10683	24609;24610;24611	24609					0.09773247693647136
LYIVEPLKF	9	Unmodified	_LYIVEPLKF_					0	0	0		ENSG00000094975|ENST00000263688|SUCO;nc|ENSG00000094975|Q9UBS9-2|SUCO	ENSG00000094975|ENST00000263688|SUCO	ENSG00000094975|ENST00000263688|SUCO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3353149294853	2	561.333893	1120.65323	1.6523	0.00092751	0.13214	7.4176E-05	1.7845	0.0010017	561.3336565127715	68.601	1.0465	70.454	70.056	71.103	1.853					80	33	5	0	0	0	0.037098	3	28730	28730;28767;28819		78.728	20.478	1	61570000			21515	1179	10643	10683	24612;24613;24614	24612					0.09773247693647136
LYIVHPTMF	9	Unmodified	_LYIVHPTMF_					0	0	0		ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8022338747978	2	560.79662	1119.57869	2.5415	0.0014253	3.1104	0.0017443	5.6519	0.0031696	560.7984103732119	59.355	0.55862	60.774	60.587	61.146	1.4196					46	17	4	0	0	0	0.00029988	2	24880	24880;24927		137.59	87.652	1	5981400			21516	4362	10644	10684	24615;24616	24615					0.02368161610615971
LYIVHPTMF	9	Unmodified	_LYIVHPTMF_					0	0	0		ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8004028201103	2	560.79662	1119.57869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.811	1	60.78	60.28	61.28	1.969								0	0	0	0.0056841	1	24676	24676		97.075	66.438	1				21517	4362	10644	10684	24617	24617					0.02368161610615971
LYIVHPTMF	9	Unmodified	_LYIVHPTMF_					0	0	0		ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	ENSG00000175220|ENST00000311956|ARHGAP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7986328005791	2	560.79662	1119.57869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.936	1	60.905	60.405	61.405	1.969								0	0	0	0.00022378	1	24728	24728		109.63	77.324	1				21518	4362	10644	10684	24618	24618					0.02368161610615971
LYIWNELV	8	Unmodified	_LYIWNELV_					0	0	0			REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7885009646416	2	525.286943	1048.55933	1.7257	0.00090648	2.2343	0.0011736	3.96	0.0020801	525.2887090925029	46.137	0.59627	47.512	47.116	47.712	1.3751					44	18	3	0	0	0	0.87655	1	19357	19357		11.114	1.767	1	1595900	+		21519	14181	10645	10685	24619	24619					0.03699528591369017
LYIYPQSLNF	10	Unmodified	_LYIYPQSLNF_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.3301269412041	2	629.329339	1256.64412	2.2693	0.0014281	1.7702	0.001114	4.0395	0.0025422	629.3299055611658	77.186	0.31786	78.467	78.313	78.631	1.2809					21	9	3	0	0	0	0.057404	2	32378	32378;32427		75.761	33.921	1	4448000			21520	1975	10646	10686	24620;24621	24620					0.026068543373185094
LYIYPQSLNF	10	Unmodified	_LYIYPQSLNF_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.3315917849541	2	629.329339	1256.64412	1.7197	0.0010823	0.83109	0.00052303	2.5508	0.0016053	629.3300483673654	76.719	0.3841	78.486	78.255	78.639	1.7672					28	11	3	0	0	0	0.048317	2	32169	32169;32223		85.642	43.802	1	3380800			21521	1975	10646	10686	24622;24623	24622					0.026068543373185094
LYKCHRLL	8	Unmodified	_LYKCHRLL_					0	0	0			REV__ENST00000498778.5_1_7:131151082-131172419:+|nuORF	REV__ENST00000498778.5_1_7:131151082-131172419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3048583865166	2	523.302404	1044.59026	2.175	0.0011382	0.17094	8.9452E-05	2.3459	0.0012276	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.88409	1	28723	28723		6.3541	0	1	5777900	+		21522	9732	10647	10687	24624	24624					0.06974403424624143
LYKEILTR	8	Unmodified	_LYKEILTR_					0	0	0		ENST00000467906.5_1_6:43030654-43039600:+|nuORF;nc|ENSG00000137171|Q9NSK0-5|KLC4;nc|ENSG00000174996|Q9H0B6-2|KLC2;nc|ENSG00000126214|Q07866-8|KLC1;nc|ENSG00000126214|Q07866-2|KLC1;nc|ENSG00000126214|Q07866-3|KLC1;nc|ENSG00000126214|Q07866|KLC1;nc|ENSG00000126214|Q07866-7|KLC1;nc|ENSG00000126214|Q07866-5|KLC1;nc|ENSG00000126214|Q07866-10|KLC1;ENSG00000137171|ENST00000347162|KLC4;ENSG00000174996|ENST00000394067|KLC2;nc|ENSG00000126214|Q07866-6|KLC1;nc|ENSG00000137171|Q9NSK0-3|KLC4;nc|ENSG00000126214|Q07866-4|KLC1;ENSG00000126214|ENST00000334553|KLC1	ENST00000467906.5_1_6:43030654-43039600:+|nuORF	ENST00000467906.5_1_6:43030654-43039600:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1390869021416	2	518.313492	1034.61243	1.8619	0.00096503	2.1226	0.0011002	3.9844	0.0020652	518.315236774657	71.082	0.38416	71.082	70.842	71.227	0					19	11	2	0	0	0	2.3239	1	29649	29649		5.7604	1.0044	1	895790			21523	2301	10648	10688	24625	24625					0.09650906374031365
LYKFSADEF	9	Unmodified	_LYKFSADEF_					0	0	0		ENST00000473294.6_1_1:33098913-33099651:-|nuORF;ENST00000483138.5_1_1:33093465-33116130:-|nuORF;nc|ENSG00000176261|Q8IWT0-2|ZBTB8OS;ENSG00000176261|ENST00000468695|ZBTB8OS;PIGT-ZBTB8OS|1|fusion	ENST00000473294.6_1_1:33098913-33099651:-|nuORF	ENST00000473294.6_1_1:33098913-33099651:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2715942263603	2	560.27149	1118.52843	1.5862	0.00088872	0.016271	9.1163E-06	1.6025	0.00089784	560.2718024661923	45.355	0.25301	47.315	47.176	47.429	1.9596					14	7	2	0	0	0	0.63129	1	19012	19012		10.074	2.1638	1	907330			21524	4403	10649	10689	24626	24626					-0.02609669513526569
LYKKVRMKE	9	Unmodified	_LYKKVRMKE_					0	0	0			REV__tr|A0A7D7AEV7|A0A7D7AEV7_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03805PE=4SV=1	REV__tr|A0A7D7AEV7|A0A7D7AEV7_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8569213747978	2	597.855001	1193.69545	2.7426	0.0016397	1.9742	0.0011803	4.7168	0.00282	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.76456	2	31749	31749;31889		4.756	0.42677	1	9838100	+		21525	15915	10650	10690	24627;24628	24627					0.10634899830415634
LYKRKKKK	8	Unmodified	_LYKRKKKK_					0	0	0			REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|33|2|sense	REV__L1PB1_dup5905|chr7:93807211-93809400:+|8.337698263303487|0.2056128638309657|5.34|416.0|33|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3752319216728	2	546.374218	1090.73388	0.94387	0.0005157	0.62083	0.00033921	1.5647	0.00085491	546.3746802302489	109.41	0.33636	109.41	109.25	109.59	0					35	14	3	0	0	0	0.89178	1	47277	47277		0.69038	0.69038	1	13634000	+		21526	14338	10651	10691	24629	24629					0.1921457352723337
LYKTIFEGF	9	Unmodified	_LYKTIFEGF_					0	0	0		ENSG00000116198|ENST00000378230|CEP104;ENST00000495701.1_1_1:3746348-3747783:-|nuORF	ENSG00000116198|ENST00000378230|CEP104	ENSG00000116198|ENST00000378230|CEP104	MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3023559451103	2	559.30005	1116.58555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.581	1	62.546	62.046	63.046	1.9653								0	0	0	0.091705	1	25419	25419		36.127	14.38	1				21527	1958	10652	10692	24630	24630					0.031917977628836525
LYLAYEYTH	9	Unmodified	_LYLAYEYTH_					0	0	0		tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	tr|A0A553STY4|A0A553STY4_NIACIGlucuronylhydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05880PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7921020388603	2	586.784764	1171.55498	3.2393	0.0019008	1.1263	0.00066092	4.3656	0.0025617	586.7852460725672	94.35	0.47083	95.538	95.302	95.773	1.1887					46	14	4	0	0	0	0.22519	1	39648	39648		30.225	3.3412	1	9870500			21528	16672	10653	10693	24631	24631					-0.02393980622196068
LYLEFLQKF	9	Unmodified	_LYLEFLQKF_					0	0	0		MPHOSPH10-ATP6V1B1|1|fusion;chr2:70963261-70963572|379|12.15|0.48|4.67|+|ENST00000412314|ATP6V1B1,VAX2;ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1	MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8387939333916	2	600.8368	1199.65905	2.7615	0.0016592	-0.00052134	-3.1324E-07	2.7609	0.0016589	600.8367765425581	79.533	0.49625	80.784	80.582	81.078	1.2512					40	15	4	0	0	0	0.0006934	2	33402	33353;33402		134.3	56.146	1	4133300			21529	7799	10654	10694	24632;24633	24633					0.06720346205293026
LYLEFLQKF	9	Unmodified	_LYLEFLQKF_					0	0	0		MPHOSPH10-ATP6V1B1|1|fusion;chr2:70963261-70963572|379|12.15|0.48|4.67|+|ENST00000412314|ATP6V1B1,VAX2;ENSG00000147416|ENST00000276390|ATP6V1B2;ENSG00000116039|ENST00000234396|ATP6V1B1	MPHOSPH10-ATP6V1B1|1|fusion	MPHOSPH10-ATP6V1B1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8376953005791	2	600.8368	1199.65905	2.0664	0.0012416	1.5269	0.00091741	3.5933	0.002159	600.8374205421828	79.033	0.37298	80.768	80.567	80.94	1.735					31	11	4	0	0	0	0.0080158	2	33119	33119;33161		110.67	41.076	1	6290300			21530	7799	10654	10694	24634;24635	24634					0.06720346205293026
LYLENIDEF	9	Unmodified	_LYLENIDEF_					0	0	0		ENST00000532784.5_1_11:74303703-74306426:+|nuORF;ENST00000532497.5_1_11:74303703-74322559:+|nuORF;ENST00000527458.5_1_11:74303652-74303820:+|nuORF;ENSG00000077514|ENST00000263681|POLD3	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.2812988162041	2	578.282054	1154.54956	2.9477	0.0017046	0.31256	0.00018075	3.2603	0.0018853	578.281792910947	70.721	0.31656	72.075	71.937	72.253	1.3536					21	9	3	0	0	0	0.19075	1	29664	29664		34.102	5.6156	1	2367000			21531	7178	10655	10695	24636	24636					-0.02153704204670248
LYLENIDEF	9	Unmodified	_LYLENIDEF_					0	0	0		ENST00000532784.5_1_11:74303703-74306426:+|nuORF;ENST00000532497.5_1_11:74303703-74322559:+|nuORF;ENST00000527458.5_1_11:74303652-74303820:+|nuORF;ENSG00000077514|ENST00000263681|POLD3	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	ENST00000532784.5_1_11:74303703-74306426:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.2828857302666	2	578.282054	1154.54956	1.9369	0.0011201	-2.6078	-0.0015081	-0.67095	-0.000388	578.2802349729479	70.335	0.31351	72.173	71.946	72.26	1.8378					20	9	3	0	0	0	0.34572	1	29480	29480		23.148	1.4018	1	1157000			21532	7178	10655	10695	24637	24637					-0.02153704204670248
LYLEVWYLV	9	Unmodified	_LYLEVWYLV_					0	0	0			REV__ENST00000471694.1_1_3:107764569-107764836:-|nuORF	REV__ENST00000471694.1_1_3:107764569-107764836:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3333618044853	2	599.33135	1196.64815	3.1738	0.0019022	-0.79391	-0.00047581	2.3799	0.0014264	599.3301852918252	74.806	0.37461	76.112	75.905	76.28	1.3063					28	11	3	0	0	0	0.3154	1	31432	31432		24.674	0.65332	1	2303400	+		21533	13286	10656	10696	24638	24638					0.05768943831026263
LYLEVWYLV	9	Unmodified	_LYLEVWYLV_					0	0	0			REV__ENST00000471694.1_1_3:107764569-107764836:-|nuORF	REV__ENST00000471694.1_1_3:107764569-107764836:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3309814333916	2	599.33135	1196.64815	2.9789	0.0017854	-2.8636	-0.0017163	0.11532	6.9114E-05	599.3291762070634	74.37	0.4137	76.166	76.021	76.434	1.7962					30	12	3	0	0	0	0.3154	1	31180	31180		24.674	4.2203	1	2485300	+		21534	13286	10656	10696	24639	24639					0.05768943831026263
LYLFLLHMK	9	Unmodified	_LYLFLLHMK_					0	0	0		PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3454467654228	2	589.343738	1176.67292	3.5158	0.002072	-2.1863	-0.0012885	1.3296	0.00078357	589.3424136385491	73.664	1.3618	74.982	74.526	75.888	1.318					88	43	3	0	0	0	0.75267	1	31040	31040		5.2307	0.90143	1	3045500			21535	8058	10657	10697	24640	24640					0.0916530043275543
LYLFLLHMK	9	Unmodified	_LYLFLLHMK_					0	0	0		PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3449584841728	2	589.343738	1176.67292	2.8028	0.0016518	-1.715	-0.0010107	1.0877	0.00064106	589.3424328799648	73.443	1.6816	75.239	74.56	76.242	1.7962					102	53	3	0	0	0	0.75267	1	30815	30815		5.2307	0.47466	1	2043500			21536	8058	10657	10697	24641	24641					0.0916530043275543
LYLGLFNRL	9	Unmodified	_LYLGLFNRL_					0	0	0		nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1	nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8310424685478	2	554.829309	1107.64407	3.3858	0.0018785	0.23963	0.00013295	3.6254	0.0020115	554.8292784999917	74.03	0.49659	75.348	75.154	75.651	1.318					37	15	3	0	0	0	0.0082953	2	31075	31028;31075		109.63	38.914	1	5064400			21537	3664	10658	10698	24642;24643	24643					0.09454899127990757
LYLGLFNRL	9	Unmodified	_LYLGLFNRL_					0	0	0		nc|ENSG00000163104|Q9H4L7-3|SMARCAD1;ENSG00000163104|ENST00000354268|SMARCAD1;nc|ENSG00000163104|Q9H4L7-2|SMARCAD1	nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	nc|ENSG00000163104|Q9H4L7-3|SMARCAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8307372927666	2	554.829309	1107.64407	2.6567	0.001474	0.45041	0.0002499	3.1072	0.0017239	554.829435840895	73.462	0.56196	75.258	74.974	75.536	1.7962					43	17	5	0	0	0	0.0082953	2	30853	30799;30853		109.63	38.914	1	5055800			21538	3664	10658	10698	24644;24645	24645					0.09454899127990757
LYLHVYVLT	9	Unmodified	_LYLHVYVLT_					0	0	0		ENST00000261168.8_1_12:14653445-14653610:+|nuORF	ENST00000261168.8_1_12:14653445-14653610:+|nuORF	ENST00000261168.8_1_12:14653445-14653610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8257934451103	2	560.823692	1119.63283	3.2006	0.001795	1.6366	0.00091785	4.8372	0.0027128	560.8242961248897	64.442	0.33494	65.849	65.65	65.985	1.4071					31	10	4	0	0	0	0.061246	1	27003	27003		63.563	3.1733	1	9882700			21539	5617	10659	10699	24646	24646					0.07780077033839916
LYLHVYVLT	9	Unmodified	_LYLHVYVLT_					0	0	0		ENST00000261168.8_1_12:14653445-14653610:+|nuORF	ENST00000261168.8_1_12:14653445-14653610:+|nuORF	ENST00000261168.8_1_12:14653445-14653610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8256103396416	2	560.823692	1119.63283	2.9319	0.0016443	1.4323	0.00080326	4.3642	0.0024476	560.8240729012724	63.853	0.36802	65.782	65.613	65.981	1.928					34	11	4	0	0	0	0.087207	1	26819	26819		53.576	2.7205	1	10005000			21540	5617	10659	10699	24647	24647					0.07780077033839916
LYLKALEGF	9	Unmodified	_LYLKALEGF_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3042480349541	2	527.302593	1052.59063	2.9036	0.0015311	0.6326	0.00033357	3.5362	0.0018647	527.3026199665234	62.342	0.59505	63.76	63.396	63.992	1.4177					37	18	3	0	0	0	0.0060384	2	26156	26111;26156		118.07	63.295	1	11208000			21541	1945	10660	10700	24648;24649	24649					0.06644101625443
LYLKALEGF	9	Unmodified	_LYLKALEGF_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3040038943291	2	527.302593	1052.59063	2.7434	0.0014466	0.67716	0.00035707	3.4206	0.0018037	527.3026119665068	61.777	0.47363	63.735	63.465	63.938	1.9571					39	14	4	0	0	0	0.0060384	2	25935	25884;25935		118.07	53.832	1	9744900			21542	1945	10660	10700	24650;24651	24651					0.06644101625443
LYLKALEGF	9	Unmodified	_LYLKALEGF_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	527.302593	1052.59063	3.2777	0.0017284	6.4244	0.0033876	9.7021	0.0051159	527.3074552218116	62.178	0.17602	64.135	64.091	64.267	1.9571	0.18741	0.005631	NaN	118.07	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	811080			21543	1945	10660	10700							0.06644101625443
LYLKEDKAF	9	Unmodified	_LYLKEDKAF_					0	0	0		ENST00000467482.5_1_X:9711647-9714089:-|nuORF	ENST00000467482.5_1_X:9711647-9714089:-|nuORF	ENST00000467482.5_1_X:9711647-9714089:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	563.7661010622978	2	563.810782	1125.60701	2.6313	0.0014836	-0.7966	-0.00044913	1.8348	0.0010345	563.8103970273378	76.73	0.37553	78.024	77.792	78.168	1.2938					17	11	2	0	0	0	0.116	1	32259	32259		9.3474	0	1	952580			21544	6711	10661	10701	24652	24652					0.04923182791549152
LYLKFHRKL	9	Unmodified	_LYLKFHRKL_					0	0	0			REV__ENSG00000151694|ENST00000310823|ADAM17	REV__ENSG00000151694|ENST00000310823|ADAM17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	610.1807739138603	2	609.3795	1216.74445	2.3264	0.0014177	-0.68587	-0.00041796	1.6406	0.00099973	609.3794522398231	75.54	0.24574	75.862	75.71	75.956	0.32164					13	7	2	0	0	0	0.11898	1	31546	31546		0.6015	0	1	523030	+		21545	10404	10662	10702	24653	24653					0.1447455618163076
LYLKFHRKL	9	Unmodified	_LYLKFHRKL_					0	0	0			REV__ENSG00000151694|ENST00000310823|ADAM17	REV__ENSG00000151694|ENST00000310823|ADAM17	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	609.3795	1216.74445	2.1737	0.0013246	-0.99428	-0.00060589	1.1794	0.00071872	609.3791360339909	76.101	0.21587	76.101	75.98	76.196	0	0.11989	-0.00023818	NaN	0.6015	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634110	+		21546	10404	10662	10702							0.1447455618163076
LYLKMKPVW	9	Unmodified	_LYLKMKPVW_					0	0	0		nc|ENSG00000166349|P15918-2|RAG1;ENSG00000166349|ENST00000299440|RAG1	nc|ENSG00000166349|P15918-2|RAG1	nc|ENSG00000166349|P15918-2|RAG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3444702029228	2	589.343738	1176.67292	2.5576	0.0015073	-0.6861	-0.00040435	1.8716	0.001103	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.66839	1	32033	32033		8.5933	8.5933	1	9601000			21547	3897	10663	10703	24654	24654					0.09165300432778167
LYLKMKPVW	9	Unmodified	_LYLKMKPVW_					0	0	0		nc|ENSG00000166349|P15918-2|RAG1;ENSG00000166349|ENST00000299440|RAG1	nc|ENSG00000166349|P15918-2|RAG1	nc|ENSG00000166349|P15918-2|RAG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3422729372978	2	589.343738	1176.67292	2.6941	0.0015878	-1.164	-0.00068599	1.5301	0.00090176	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.66839	1	31738	31738		8.5933	3.3626	1	8587800			21548	3897	10663	10703	24655	24655					0.09165300432778167
LYLKVKGNVF	10	Unmodified	_LYLKVKGNVF_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF	ENSG00000108298|ENST00000225430|RPL19	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8586913943291	2	590.858067	1179.70158	2.1815	0.0012889	-0.31513	-0.0001862	1.8663	0.0011027	590.8575593276579	39.018	0.27889	40.314	40.164	40.443	1.2961					20	8	3	0	0	0	0.057925	2	16345	16345;16396		92.491	36.989	1	4093700			21549	1628	10664	10704	24656;24657	24656					0.118917413335339
LYLKVKGNVF	10	Unmodified	_LYLKVKGNVF_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF	ENSG00000108298|ENST00000225430|RPL19	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2414123415947	3	394.241137	1179.70158	1.5901	0.00062689	0.79273	0.00031253	2.3828	0.00093941	394.2406340237201	39.008	0.50256	40.304	40.069	40.572	1.2961					37	15	4	0	0	0	0.15278	1	16356	16356		45.74	1.8816	1	32440000			21550	1628	10664	10704	24658	24658					0.118917413335339
LYLKVKGNVF	10	Unmodified	_LYLKVKGNVF_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF	ENSG00000108298|ENST00000225430|RPL19	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8582031130791	2	590.858067	1179.70158	1.1408	0.00067406	0.84677	0.00050032	1.9876	0.0011744	590.8584677759334	38.42	0.40889	40.257	40.084	40.493	1.8366					27	12	3	0	0	0	0.059378	2	16147	16095;16147		74.929	11.366	1	3282700			21551	1628	10664	10704	24659;24660	24660					0.118917413335339
LYLKVKGNVF	10	Unmodified	_LYLKVKGNVF_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000498753.1_1_3:141762467-141763034:-|nuORF;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000472309.1_1_4:179208113-179208287:+|nuORF;ENST00000429272.1_1_2:131051524-131051887:+|nuORF	ENSG00000108298|ENST00000225430|RPL19	ENSG00000108298|ENST00000225430|RPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2414123415947	3	394.241137	1179.70158	0.93802	0.0003698	0.41854	0.00016501	1.3566	0.00053481	394.24093285839876	38.42	0.82745	40.257	40.02	40.848	1.8366					59	25	4	0	0	0	0.32206	2	16117	16117;16157		45.74	9.6129	1	25004000			21552	1628	10664	10704	24661;24662	24661					0.118917413335339
LYLLAPQGKK	10	Unmodified	_LYLLAPQGKK_					0	0	0			REV__ENSG00000138600|ENST00000261854|SPPL2A	REV__ENSG00000138600|ENST00000261854|SPPL2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5691100955009	3	377.569253	1129.68593	0.86243	0.00032563	-0.65141	-0.00024595	0.21103	7.9677E-05	377.568969353422	38.579	0.62495	39.875	39.413	40.038	1.2961					56	20	4	0	0	0	0.79426	1	16074	16074		12.873	0	1	12801000	+		21553	10068	10665	10705	24663	24663					0.126274548164929
LYLLHYLF	8	Unmodified	_LYLLHYLF_					0	0	0			REV__ENST00000493491.5_1_3:4841632-4887906:+|nuORF	REV__ENST00000493491.5_1_3:4841632-4887906:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3055908083916	2	541.307678	1080.6008	0.96526	0.0005225	-3.5858	-0.001941	-2.6205	-0.0014185	541.3057809381651	51.798	0.33386	53.195	53.012	53.346	1.3966					20	11	2	0	0	0	0.43282	2	21676	21676;21715		52.334	10.379	1	4386700	+		21554	8142	10666	10706	24664;24665	24664					0.06372709350694095
LYLLSYSITFI	11	Unmodified	_LYLLSYSITFI_					0	0	0			REV__tr|A0A7D6VNE1|A0A7D6VNE1_9CLOTDUF3021familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12530PE=4SV=1	REV__tr|A0A7D6VNE1|A0A7D6VNE1_9CLOTDUF3021familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	666.8746215701103	2	666.876122	1331.73769	1.0965	0.0007312	-1.89	-0.0012604	-0.79351	-0.00052917	666.8747809744801	71.182	0.37124	73.006	72.758	73.129	1.824					21	11	3	0	0	0	0.45252	1	29851	29851		25.399	2.663	1	1438300	+		21555	15333	10667	10707	24666	24666					0.08509153719751339
LYLPKSWTI	9	Unmodified	_LYLPKSWTI_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-2|TMPRSS3;ENST00000474596.5_1_21:43792873-43809176:-|nuORF;chr21:42382234-42388403|145|15.51|0.04|8.71|-|1|TMPRSS3,TMPRSS3|1;chr21:42382234-42383970|417|35.64|0.95|5.24|-|1|TMPRSS3,TMPRSS3|1;chr21:42382234-42382695|395|12.98|0.38|5.1|-|1|TMPRSS3,TMPRSS3|1;ENST00000478680.1_1_21:43802093-43802829:-|nuORF;ENST00000476848.5_1_21:43792873-43802453:-|nuORF	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8262206912041	2	560.823692	1119.63283	3.2006	0.001795	1.6366	0.00091785	4.8372	0.0027128	560.8242961248897	64.442	0.33494	65.849	65.65	65.985	1.4071					31	10	4	0	0	0	0.063746	1	27044	27044		62.573	2.1831	1	9882700			21556	253	10668	10708	24667	24667					0.07780077033839916
LYLPKSWTI	9	Unmodified	_LYLPKSWTI_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-2|TMPRSS3;ENST00000474596.5_1_21:43792873-43809176:-|nuORF;chr21:42382234-42388403|145|15.51|0.04|8.71|-|1|TMPRSS3,TMPRSS3|1;chr21:42382234-42383970|417|35.64|0.95|5.24|-|1|TMPRSS3,TMPRSS3|1;chr21:42382234-42382695|395|12.98|0.38|5.1|-|1|TMPRSS3,TMPRSS3|1;ENST00000478680.1_1_21:43802093-43802829:-|nuORF;ENST00000476848.5_1_21:43792873-43802453:-|nuORF	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8249999880791	2	560.823692	1119.63283	2.9319	0.0016443	1.4323	0.00080326	4.3642	0.0024476	560.8240729012724	63.853	0.36802	65.782	65.613	65.981	1.928					34	11	4	0	0	0	0.036104	1	26774	26774		79.596	8.8808	1	10005000			21557	253	10668	10708	24668	24668					0.07780077033839916
LYLPSFFTY	9	Unmodified	_LYLPSFFTY_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7974120974541	2	575.794601	1149.57465	4.045	0.0023291	0.47499	0.00027349	4.52	0.0026026	575.7948247588515	94.809	0.53244	95.55	95.291	95.824	0.74124					64	17	5	0	0	0	0.033521	4	39948	39820;39866;39905;39948		81.864	25.089	1	51742000			21558	2766	10669	10709	24669;24670;24671;24672	24672					0.005843953885914743
LYLPSFFTY	9	Unmodified	_LYLPSFFTY_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1150.586596667767	1	1150.58192	1149.57465	3.7332	0.0042954	0.37517	0.00043167	4.1084	0.004727	1150.5823395324046	94.825	0.41837	95.566	95.325	95.743	0.74124					33	13	3	0	0	0	0.0045981	3	39906	39867;39906;39949		123.1	52.381	1	35407000			21559	2766	10669	10709	24673;24674;24675	24674					0.005843953885914743
LYLPSFFTY	9	Unmodified	_LYLPSFFTY_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1150.585620105267	1	1150.58192	1149.57465	2.9698	0.003417	0.17892	0.00020586	3.1487	0.0036229	1150.5818493638183	94.387	0.50162	95.575	95.302	95.803	1.1887					49	15	4	0	0	0	0.0017386	4	39670	39629;39670;39709;39748		131.3	41.871	1	38036000			21560	2766	10669	10709	24676;24677;24678;24679	24677					0.005843953885914743
LYLPSFFTY	9	Unmodified	_LYLPSFFTY_					0	0	0		nc|ENSG00000137409|Q9NZJ7-2|MTCH1;ENSG00000137409|ENST00000373627|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	nc|ENSG00000137409|Q9NZJ7-2|MTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7964965701103	2	575.794601	1149.57465	3.2717	0.0018838	0.20756	0.00011951	3.4793	0.0020034	575.7946857059802	94.387	0.56195	95.575	95.302	95.864	1.1887					61	17	5	0	0	0	0.028763	3	39683	39636;39683;39722		89.427	29.037	1	42659000			21561	2766	10669	10709	24680;24681;24682	24681					0.005843953885914743
LYLRARTVW	9	Unmodified	_LYLRARTVW_					0	0	0			REV__AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|7|2|sense	REV__AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|7|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3424560427666	2	589.345658	1176.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.086	1	76.086	75.586	76.586	0								0	0	0	0.40188	1	31671	31671		8.5933	0	1		+		21562	8112	10670	10710	24683	24683					0.0954910625082448
LYLTFYII	8	Unmodified	_LYLTFYII_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3052245974541	2	523.302062	1044.58957	2.175	0.0011382	0.82589	0.00043219	3.0009	0.0015704	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.87803	1	28673	28673		10.183	3.8293	1	5777900	+		21563	10761	10671	10711	24684	24684					0.06905887256561982
LYLTIARQL	9	Unmodified	_LYLTIARQL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8354980349541	2	545.834591	1089.65463	1.4998	0.00081863	0.5568	0.00030392	2.0566	0.0011225	545.8346428977035	54.658	0.31231	56.062	55.899	56.211	1.4048					17	9	2	0	0	0	0.019432	1	22872	22872		99.799	24.87	1	3742200			21564	2648	10672	10712	24685	24685					0.11338881782421595
LYLTIARQL	9	Unmodified	_LYLTIARQL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8354369997978	2	545.834591	1089.65463	1.7763	0.00096956	0.16944	9.2484E-05	1.9457	0.001062	545.8347008342968	54.143	0.31689	56.111	55.938	56.255	1.9684					20	9	3	0	0	0	0.12251	1	22679	22679		41.84	7.4379	1	3120400			21565	2648	10672	10712	24686	24686					0.11338881782421595
LYLVARAVKL	10	Unmodified	_LYLVARAVKL_					0	0	0			REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5844604372978	3	382.585015	1144.73321	0.17715	6.7777E-05	0.094941	3.6323E-05	0.2721	0.0001041	382.5849492612679	52.313	1.722	53.709	53.346	55.068	1.3966					136	61	3	0	0	0	0.39773	1	22081	22081		33.445	0.65921	1	6499600	+		21566	9731	10673	10713	24687	24687					0.16663734087501325
LYLVARAVKL	10	Unmodified	_LYLVARAVKL_					0	0	0			REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3752319216728	2	573.373884	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.484	1	53.881	53.381	54.381	1.3966								0	0	0	0.64828	1	21972	21972		24.021	9.1823	1		+		21567	9731	10673	10713	24688	24688					0.16663734087501325
LYLVARAVKL	10	Unmodified	_LYLVARAVKL_					0	0	0			REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.3747436404228	2	573.373884	1144.73321	1.2298	0.00070514	-0.83599	-0.00047933	0.39382	0.0002258	573.3734407106263	51.938	0.92554	53.911	53.395	54.32	1.9722					32	29	2	0	0	0	0.83036	1	21617	21617		14.838	0	1	768110	+		21568	9731	10673	10713	24689	24689					0.16663734087501325
LYLVARAVKL	10	Unmodified	_LYLVARAVKL_					0	0	0			REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	REV__STRIP2|p.N588Tfs*21|1|0.05|ENSG00000128578|chr7:129464723-129464723|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	573.2863036990166	2	573.373884	1144.73321	1.2298	0.00070514	-0.83599	-0.00047933	0.39382	0.0002258	573.3734407106263	51.938	0.92554	53.911	53.395	54.32	1.9722					32	29	2	0	0	0	0.12471	1	21878	21878		13.906	0	1	768110	+		21569	9731	10673	10713	24690	24690					0.16663734087501325
LYLVMEYVP	9	Unmodified	_LYLVMEYVP_					0	0	0		ENSG00000165059|ENST00000377276|PRKACG	ENSG00000165059|ENST00000377276|PRKACG	ENSG00000165059|ENST00000377276|PRKACG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	563.2944213747978	2	563.796286	1125.57802	1.418	0.00079948	-2.2627	-0.0012757	-0.8447	-0.00047624	563.795198305864	52.11	0.30313	54.082	53.954	54.257	1.9722					12	9	2	0	0	0	0.11812	1	21859	21859		4.756	0.42677	1	760230			21570	3813	10674	10714	24691	24691					0.02025322170925392
LYLVRWSLW	9	Unmodified	_LYLVRWSLW_					0	0	0		ENST00000444388.5_1_22:27122637-27130274:+|nuORF	ENST00000444388.5_1_22:27122637-27130274:+|nuORF	ENST00000444388.5_1_22:27122637-27130274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3520995974541	2	618.350409	1234.68626	2.7954	0.0017285	2.115	0.0013078	4.9104	0.0030364	618.3526040690098	70.725	0.34764	72.078	71.906	72.253	1.3536					25	10	3	0	0	0	0.30098	1	29712	29712		25.399	0.72543	1	3253700			21571	6574	10675	10715	24692	24692					0.07830874536352894
LYLVRWSLW	9	Unmodified	_LYLVRWSLW_					0	0	0		ENST00000444388.5_1_22:27122637-27130274:+|nuORF	ENST00000444388.5_1_22:27122637-27130274:+|nuORF	ENST00000444388.5_1_22:27122637-27130274:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	618.350409	1234.68626	1.9258	0.0011908	6.7706	0.0041866	8.6963	0.0053774	618.3548688051092	70.188	0.22421	72.025	71.849	72.073	1.8378	-0.026365	0.0031457	NaN	25.399	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2065700			21572	6574	10675	10715							0.07830874536352894
LYLWPVPAPLP	11	Unmodified	_LYLWPVPAPLP_					0	0	0			REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3705932497978	2	633.368267	1264.72198	2.4138	0.0015288	1.4976	0.00094851	3.9114	0.0024773	633.3690434173299	80.495	1.7494	81.746	80.955	82.705	1.2512					154	56	5	0	0	0	0.95124	3	34078	33742;34078;34180		6.7232	2.7788	1	8479200	+		21573	13783	10676	10716	24693;24694;24695	24694					0.10020911993365189
LYLWPVPAPLP	11	Unmodified	_LYLWPVPAPLP_					0	0	0			REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	REV__ENST00000541544.1_1_11:71936127-71939670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3713256716728	2	633.368267	1264.72198	3.1967	0.0020247	-0.31467	-0.0001993	2.882	0.0018254	633.3687539773978	81.322	0.64812	83.018	82.953	83.601	1.6959					38	20	2	0	0	0	0.95124	2	34141	34141;34195		6.7232	1.4263	1	1074700	+		21574	13783	10676	10716	24696;24697	24696					0.10020911993365189
LYNALTYYS	9	Unmodified	_LYNALTYYS_					0	0	0		ENSG00000181773|ENST00000374024|GPR3;ENSG00000146360|ENST00000275169|GPR6;nc|ENSG00000146360|P46095-2|GPR6	ENSG00000181773|ENST00000374024|GPR3	ENSG00000181773|ENST00000374024|GPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2753173708916	2	554.27149	1106.52843	3.42	0.0018956	1.6259	0.0009012	5.0459	0.0027968	554.2722973973343	91.068	0.37595	92.434	92.28	92.656	1.366					28	11	3	0	0	0	0.46905	1	38326	38326		16.942	2.3606	1	670590			21575	3148	10677	10717	24698	24698					-0.020576695135332557
LYNDRMFRI	9	Unmodified	_LYNDRMFRI_					0	0	0		ENST00000518876.1_1_8:97243285-97244208:-|nuORF;ENST00000519322.1_1_8:97243965-97247767:-|nuORF;ENSG00000156467|ENST00000287022|UQCRB;nc|ENSG00000156467|P14927-2|UQCRB	ENST00000518876.1_1_8:97243285-97244208:-|nuORF	ENST00000518876.1_1_8:97243285-97244208:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.8824340701103	3	409.881614	1226.62301	2.045	0.00083819	0.86458	0.00035437	2.9095	0.0011926	409.88223826285673	39.538	0.34122	40.848	40.65	40.991	1.3102					27	11	3	0	0	0	0.24056	2	16606	16557;16606		28.495	17.695	1	2563800			21576	3449	10678	10718	24699;24700	24700					0.018765657568110328
LYNDRMFRI	9	Unmodified	_LYNDRMFRI_					0	0	0		ENST00000518876.1_1_8:97243285-97244208:-|nuORF;ENST00000519322.1_1_8:97243965-97247767:-|nuORF;ENSG00000156467|ENST00000287022|UQCRB;nc|ENSG00000156467|P14927-2|UQCRB	ENST00000518876.1_1_8:97243285-97244208:-|nuORF	ENST00000518876.1_1_8:97243285-97244208:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.8824951052666	3	409.881614	1226.62301	1.3145	0.0005388	0.62803	0.00025742	1.9426	0.00079622	409.8821583177835	38.996	0.35231	40.833	40.654	41.007	1.8366					25	10	3	0	0	0	0.24056	2	16367	16322;16367		28.495	14.976	1	2854300			21577	3449	10678	10718	24701;24702	24702					0.018765657568110328
LYNHHRRL	8	Unmodified	_LYNHHRRL_					0	0	0			REV__AOC2|p.F707*|1|0.13|ENSG00000131480|chr17:42850196-42850197|TT/-|frameshift_variant	REV__AOC2|p.F707*|1|0.13|ENSG00000131480|chr17:42850196-42850197|TT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8121826052666	2	554.809774	1107.60499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.391	1	48.361	47.861	48.861	1.9703								0	0	0	1.0178	1	19433	19433		19.439	2.4967	1		+		21578	8127	10679	10719	24703	24703					0.05549611616970651
LYNKGFIYL	9	Unmodified	_LYNKGFIYL_					0	0	0		ENST00000521704.1_1_8:124792721-124796858:+|nuORF;ENSG00000176853|ENST00000334705|FAM91A1	ENST00000521704.1_1_8:124792721-124796858:+|nuORF	ENST00000521704.1_1_8:124792721-124796858:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8184081912041	2	565.815867	1129.61718	0.94339	0.00053378	1.3831	0.00078258	2.3265	0.0013164	565.8161590172268	55.875	0.24296	57.843	57.69	57.933	1.9684					12	7	2	0	0	0	0.12174	1	23436	23436		42.095	9.6409	1	1424300			21579	4421	10680	10720	24704	24704					0.05755790516809611
LYNKGFIYL	9	Unmodified	_LYNKGFIYL_					0	0	0		ENST00000521704.1_1_8:124792721-124796858:+|nuORF;ENSG00000176853|ENST00000334705|FAM91A1	ENST00000521704.1_1_8:124792721-124796858:+|nuORF	ENST00000521704.1_1_8:124792721-124796858:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	565.815867	1129.61718	0.83508	0.0004725	2.6872	0.0015205	3.5223	0.001993	565.8177430979316	56.438	0.31262	57.852	57.658	57.971	1.4145	0.0045082	0.00056284	NaN	42.095	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1383800			21580	4421	10680	10720							0.05755790516809611
LYNRYLMV	8	Unmodified	_LYNRYLMV_					0	0	0			REV__ENSG00000125245|ENST00000397470|GPR18	REV__ENSG00000125245|ENST00000397470|GPR18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1630737185478	2	536.28642	1070.55829	3.1001	0.0016625	-1.2672	-0.00067956	1.8329	0.00098298	536.2848583366615	81.007	0.27731	82.241	82.07	82.348	1.2332					12	8	2	0	0	0	2.3239	1	33953	33953		2.8892	0	1	618330	+		21581	9660	10681	10721	24705	24705					0.025829909508274795
LYNWEVAIF	9	Unmodified	_LYNWEVAIF_					0	0	0		ENSG00000107341|ENST00000263228|UBE2R2;UBE2R2|p.G47R|1|0.2|ENSG00000107341|chr9:33817896-33817896|G/A|missense_variant;ENST00000586788.1_1_19:531880-536341:+|nuORF;ENSG00000099804|ENST00000215574|CDC34	ENSG00000107341|ENST00000263228|UBE2R2	ENSG00000107341|ENST00000263228|UBE2R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.7994262576103	2	577.797675	1153.5808	4.5799	0.0026463	0.45808	0.00026468	5.038	0.002911	577.7979049725868	90.018	0.44376	91.038	90.863	91.307	1.0199					40	13	4	0	0	0	0.10993	3	37952	37905;37952;38003		46.021	17.534	1	5415800			21582	1599	10682	10722	24706;24707;24708	24707					0.010149136200880093
LYNWEVAIF	9	Unmodified	_LYNWEVAIF_					0	0	0		ENSG00000107341|ENST00000263228|UBE2R2;UBE2R2|p.G47R|1|0.2|ENSG00000107341|chr9:33817896-33817896|G/A|missense_variant;ENST00000586788.1_1_19:531880-536341:+|nuORF;ENSG00000099804|ENST00000215574|CDC34	ENSG00000107341|ENST00000263228|UBE2R2	ENSG00000107341|ENST00000263228|UBE2R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8003417849541	2	577.797675	1153.5808	4.4102	0.0025482	-0.10033	-5.7968E-05	4.3099	0.0024902	577.797591792047	89.652	0.47422	91.057	90.798	91.272	1.4044					40	14	4	0	0	0	0.083604	3	37767	37721;37767;37821		54.774	22	1	3514400			21583	1599	10682	10722	24709;24710;24711	24710					0.010149136200880093
LYPDHFHLL	9	Unmodified	_LYPDHFHLL_					0	0	0		ENST00000487483.6_1_19:46886892-46890886:+|nuORF;ENST00000467502.6_1_19:46886456-46890886:+|nuORF;ENST00000486994.5_1_19:46886892-46893600:+|nuORF;ENSG00000011485|ENST00000012443|PPP5C	ENST00000487483.6_1_19:46886892-46890886:+|nuORF	ENST00000487483.6_1_19:46886892-46890886:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1536743044853	3	385.537953	1153.59203	1.1926	0.0004598	0.24874	9.5899E-05	1.4414	0.0005557	385.5380158727576	47.996	0.77802	49.384	49.147	49.925	1.388					61	24	4	0	0	0	0.11799	1	20053	20053		1.1933	0.92432	1	6540900			21584	574	10683	10723	24712	24712					0.021377357142227993
LYPEGLAQL	9	Unmodified	_LYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2780029177666	2	502.276575	1002.5386	3.2881	0.0016516	-0.28995	-0.00014563	2.9982	0.0015059	502.27658004142967	60.91	0.71881	62.33	62.027	62.746	1.4196					55	22	3	0	0	0	0.037761	5	25611	25488;25533;25572;25611;25655		78.149	36.055	1	7936000			21585	3540	10684	10724	24713;24714;24715;24716;24717	24716					0.03742938211712499
LYPEGLAQL	9	Unmodified	_LYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1003.549731433392	1	1003.54587	1002.5386	3.5912	0.0036039	0.8705	0.00087358	4.4617	0.0044775	1003.5469588476202	61.037	0.59908	62.457	62.027	62.626	1.4196					37	18	3	0	0	0	0.010279	3	25632	25528;25577;25632		107.19	29.038	1	2228200			21586	3540	10684	10724	24718;24719;24720	24720					0.03742938211712499
LYPEGLAQL	9	Unmodified	_LYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2782470583916	2	502.276575	1002.5386	3.0616	0.0015378	0.082169	4.1271E-05	3.1438	0.0015791	502.2766532714285	60.415	0.68681	62.38	62.073	62.76	1.9653					52	21	3	0	0	0	0.037761	5	25337	25292;25337;25377;25416;25472		78.149	26.085	1	7714700			21587	3540	10684	10724	24721;24722;24723;24724;24725	24722					0.03742938211712499
LYPEGLAQL	9	Unmodified	_LYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1003.550036609173	1	1003.54587	1002.5386	3.5876	0.0036003	0.94807	0.00095143	4.5356	0.0045517	1003.5469122092204	60.409	0.62389	62.375	62.136	62.76	1.9653					35	19	2	0	0	0	0.037098	3	25332	25332;25383;25435		78.728	31.133	1	1792800			21588	3540	10684	10724	24726;24727;24728	24726					0.03742938211712499
LYPEIFEKF	9	Unmodified	_LYPEIFEKF_					0	0	0		ENST00000366438.3_1_2:24079281-24090752:-|nuORF;nc|ENSG00000119778|Q9ULI0-2|ATAD2B;ENSG00000119778|ENST00000238789|ATAD2B	ENST00000366438.3_1_2:24079281-24090752:-|nuORF	ENST00000366438.3_1_2:24079281-24090752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.3145629763603	2	593.313158	1184.61176	1.9551	0.00116	1.7176	0.0010191	3.6727	0.0021791	593.3137935909912	66.495	0.58517	67.884	67.536	68.121	1.3887					32	18	3	0	0	0	0.21592	1	27919	27919		31.268	0.6318	1	1688700			21589	2083	10685	10725	24729	24729					0.026840669343073387
LYPEIFEKF	9	Unmodified	_LYPEIFEKF_					0	0	0		ENST00000366438.3_1_2:24079281-24090752:-|nuORF;nc|ENSG00000119778|Q9ULI0-2|ATAD2B;ENSG00000119778|ENST00000238789|ATAD2B	ENST00000366438.3_1_2:24079281-24090752:-|nuORF	ENST00000366438.3_1_2:24079281-24090752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.3148071169853	2	593.313158	1184.61176	1.7972	0.0010663	1.4834	0.0008801	3.2805	0.0019464	593.3134537611317	66.023	0.46296	67.931	67.706	68.169	1.9085					20	14	2	0	0	0	0.21592	1	27750	27750		31.268	0.6318	1	1560900			21590	2083	10685	10725	24730	24730					0.026840669343073387
LYPEVFEKF	9	Unmodified	_LYPEVFEKF_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2;nc|ENSG00000156802|Q6PL18-2|ATAD2;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3072387576103	2	586.305332	1170.59611	2.4784	0.0014531	-1.4892	-0.0008731	0.98926	0.00058001	586.3040892126439	59.62	0.59056	61.04	60.8	61.39	1.4196					41	18	3	0	0	0	0.44512	1	25059	25059		18.146	1.0598	1	2405900			21591	3457	10686	10726	24731	24731					0.01763780417286398
LYPEVFEKF	9	Unmodified	_LYPEVFEKF_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2;nc|ENSG00000156802|Q6PL18-2|ATAD2;ENST00000521903.5_1_8:124361561-124413087:-|nuORF;ENST00000521496.5_1_8:124357024-124408597:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	586.305332	1170.59611	2.5224	0.0014789	-1.2671	-0.00074292	1.2553	0.00073597	586.3039429698143	59.141	0.437	61.11	60.908	61.345	1.969	0.034822	0.00014567	NaN	18.146	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2478400			21592	3457	10686	10726							0.01763780417286398
LYPLTNYTF	9	Unmodified	_LYPLTNYTF_					0	0	0		ENST00000567110.1_1_16:56481699-56485159:-|nuORF;ENSG00000167005|ENST00000300291|NUDT21	ENST00000567110.1_1_16:56481699-56485159:-|nuORF	ENST00000567110.1_1_16:56481699-56485159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2933227419853	2	566.289682	1130.56481	2.0962	0.0011871	0.5241	0.0002968	2.6203	0.0014839	566.2906654274777	71.364	0.81953	72.705	72.364	73.184	1.3415					51	26	2	0	0	0	0.34572	2	30025	29922;30025		23.148	2.6948	1	3783900			21593	3943	10687	10727	24732;24733	24733					0.00475207383169618
LYPLTNYTF	9	Unmodified	_LYPLTNYTF_					0	0	0		ENST00000567110.1_1_16:56481699-56485159:-|nuORF;ENSG00000167005|ENST00000300291|NUDT21	ENST00000567110.1_1_16:56481699-56485159:-|nuORF	ENST00000567110.1_1_16:56481699-56485159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2953979372978	2	566.289682	1130.56481	1.0609	0.0006008	-1.2213	-0.00069162	-0.16039	-9.0829E-05	566.7904118823144	70.84	0.91879	72.677	72.381	73.299	1.8378					70	29	4	0	0	0	0.15478	1	29789	29789		38.151	7.9264	1	3765000			21594	3943	10687	10727	24734	24734					0.00475207383169618
LYPQFMFHL	9	Oxidation (M)	_LYPQFM(Oxidation (M))FHL_		LYPQFM(1)FHL		LYPQFM(60)FHL	0	0	1		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.2996703982353	2	606.299527	1210.5845	2.3012	0.0013952	-0.75253	-0.00045626	1.5486	0.00093893	606.2988561237482	69.578	0.39876	70.943	70.729	71.128	1.3657					30	12	4	0	0	0	0.070759	1	29208	29208		59.795	27.49	1	4053500			21595	1336;1311	10688	10728	24735	24735		22			-0.012367398777087146
LYPQFMFHL	9	Oxidation (M)	_LYPQFM(Oxidation (M))FHL_		LYPQFM(1)FHL		LYPQFM(60)FHL	0	0	1		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.2996093630791	2	606.299527	1210.5845	1.2614	0.00076476	-0.4211	-0.00025531	0.84026	0.00050945	606.2989485762209	69.017	0.33484	70.87	70.737	71.072	1.853					27	10	3	0	0	0	0.070759	2	28960	28960;29009		59.795	27.49	1	3139800			21596	1336;1311	10688	10728	24736;24737	24736		22			-0.012367398777087146
LYPQFMFHL	9	Unmodified	_LYPQFMFHL_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.3038207888603	2	598.30207	1194.58959	2.5715	0.0015385	0.94669	0.00056641	3.5182	0.0021049	598.3026464536603	77.272	0.44666	78.553	78.313	78.76	1.2809					24	13	2	0	0	0	0.091139	3	32401	32401;32448;32497		67.035	34.73	1	11220000			21597	1336;1311	10688	10729	24738;24739;24740	24738					7.563984922853706E-05
LYPQFMFHL	9	Unmodified	_LYPQFMFHL_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant;nc|ENSG00000100934|Q15436-2|SEC23A;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B;ENSG00000100934|ENST00000307712|SEC23A	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3036376833916	2	598.30207	1194.58959	2.2776	0.0013627	-0.2377	-0.00014222	2.0399	0.0012205	598.3023485245149	76.73	0.51409	78.498	78.222	78.736	1.7672					31	15	3	0	0	0	0.073578	3	32174	32136;32174;32216		67.035	34.73	1	9422300			21598	1336;1311	10688	10729	24741;24742;24743	24742					7.563984922853706E-05
LYPSIIQEF	9	Unmodified	_LYPSIIQEF_					0	0	0		POLA1-TSPAN7|1|fusion;nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1	POLA1-TSPAN7|1|fusion	POLA1-TSPAN7|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2997314333916	2	555.297507	1108.58046	2.5115	0.0013946	0.25233	0.00014012	2.7638	0.0015347	555.2976310075292	76.724	0.5294	78.018	77.669	78.199	1.2938					42	16	3	0	0	0	0.10993	2	32193	32145;32193		46.021	22	1	3744700			21599	1368	10689	10730	24744;24745	24745					0.030514939002614483
LYPSIIQEF	9	Unmodified	_LYPSIIQEF_					0	0	0		POLA1-TSPAN7|1|fusion;nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1	POLA1-TSPAN7|1|fusion	POLA1-TSPAN7|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2987548708916	2	555.297507	1108.58046	2.6877	0.0014925	-0.81557	-0.00045288	1.8722	0.0010396	555.2973310839238	76.128	0.53229	77.895	77.627	78.159	1.7672					44	16	4	0	0	0	0.13873	1	31956	31956		39.957	19.504	1	2908700			21600	1368	10689	10730	24746	24746					0.030514939002614483
LYQDGVFKF	9	Unmodified	_LYQDGVFKF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;AKTIP|p.D159Efs*12|1|0.04|ENSG00000166971|chr16:53494539-53494543|TCACA/-|frameshift_variant;ENST00000514047.1_1_5:24170479-24171004:+|nuORF;ENST00000563108.5_1_16:53528870-53534189:-|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.7897827029228	2	558.78985	1115.56515	1.142	0.00063812	-2.0988	-0.0011728	-0.95687	-0.00053469	558.7888570097132	53.592	0.55456	54.992	54.821	55.376	1.4005					56	21	4	0	0	0	0.00023236	3	22430	22385;22430;22478		140.63	75.398	1	51392000			21601	3939	10690	10731	24747;24748;24749	24748					0.011986271030536955
LYQDGVFKF	9	Unmodified	_LYQDGVFKF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;AKTIP|p.D159Efs*12|1|0.04|ENSG00000166971|chr16:53494539-53494543|TCACA/-|frameshift_variant;ENST00000514047.1_1_5:24170479-24171004:+|nuORF;ENST00000563108.5_1_16:53528870-53534189:-|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.7891113162041	2	558.78985	1115.56515	0.75145	0.0004199	-1.8028	-0.0010074	-1.0514	-0.0005875	558.7890064063942	53.069	0.54552	55.039	54.842	55.387	1.9697					69	26	4	0	0	0	0.0061207	4	22212	22173;22212;22251;22302		117.76	49.68	1	42829000			21602	3939	10690	10731	24750;24751;24752;24753	24751					0.011986271030536955
LYQDKFPFF	9	Unmodified	_LYQDKFPFF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.8069946169853	2	602.8055	1203.59645	3.0127	0.001816	-0.84654	-0.0005103	2.1661	0.0013057	602.8048490960848	70.583	0.60722	71.937	71.584	72.191	1.3536					52	18	4	0	0	0	0.019071	4	29616	29517;29567;29616;29658		100.09	56.232	1	4033700			21603	3062	10691	10732	24754;24755;24756;24757	24756					0.002792001371290098
LYQDKFPFF	9	Unmodified	_LYQDKFPFF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.8054687380791	2	602.8055	1203.59645	2.6487	0.0015966	-1.1604	-0.00069952	1.4882	0.00089712	602.8045518084564	69.938	0.63615	71.776	71.5	72.136	1.8378					51	19	4	0	0	0	0.029061	5	29368	29269;29318;29368;29408;29467		88.954	54.022	1	3494000			21604	3062	10691	10732	24758;24759;24760;24761;24762	24760					0.002792001371290098
LYQEIIHYF	9	Unmodified	_LYQEIIHYF_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3162109255791	2	613.316232	1224.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.621	1	65.034	64.534	65.534	1.4134								0	0	0	0.0071562	1	26685	26685		96.285	50.585	1				21605	3272	10692	10733	24763	24763					0.014585851658466709
LYQEIIHYF	9	Unmodified	_LYQEIIHYF_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3176147341728	2	613.316232	1224.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.729	1	65.136	64.636	65.636	1.4071								0	0	0	0.013924	1	26731	26731		92.653	52.704	1				21606	3272	10692	10733	24764	24764					0.014585851658466709
LYQEIIHYF	9	Unmodified	_LYQEIIHYF_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3173705935478	2	613.316232	1224.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.08	1	65.024	64.524	65.524	1.9444								0	0	0	0.00087141	1	26471	26471		99.799	49.866	1				21607	3272	10692	10733	24765	24765					0.014585851658466709
LYQEIIHYF	9	Unmodified	_LYQEIIHYF_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3177978396416	2	613.316232	1224.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.198	1	65.143	64.643	65.643	1.9444								0	0	0	0.00063723	1	26520	26520		103.35	57.654	1				21608	3272	10692	10733	24766	24766					0.014585851658466709
LYQEVFGRL	9	Unmodified	_LYQEVFGRL_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8078491091728	2	562.808574	1123.60259	0.89843	0.00050565	-0.79918	-0.00044979	0.099252	5.586E-05	562.807808555007	51.657	0.26439	53.053	52.919	53.184	1.3966					13	8	2	0	0	0	0.093059	1	21634	21634		51.63	13.656	1	3399500			21609	1034	10693	10734	24767	24767					0.04573718368669688
LYQEVFGRL	9	Unmodified	_LYQEVFGRL_					0	0	0		ENSG00000082641|ENST00000362042|NFE2L1;nc|ENSG00000082641|Q14494-2|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	ENSG00000082641|ENST00000362042|NFE2L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8079101443291	2	562.808574	1123.60259	-0.27773	-0.00015631	-1.7675	-0.00099477	-2.0452	-0.0011511	562.8073822604485	51.053	0.23132	53.028	52.882	53.113	1.9753					15	8	2	0	0	0	0.093059	1	21398	21398		51.63	9.7902	1	2434600			21610	1034	10693	10734	24768	24768					0.04573718368669688
LYQFNPAFF	9	Unmodified	_LYQFNPAFF_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1146.562915027142	1	1146.56186	1145.55458	3.1926	0.0036605	-1.1163	-0.0012799	2.0763	0.0023806	1146.5615010285032	81.652	0.30906	82.885	82.718	83.027	1.2332					21	9	3	0	0	0	0.09539	2	34265	34265;34315		50.855	30.401	1	2089100			21611	4498	10694	10735	24769;24770	24769					-0.012373555513931933
LYQFNPAFF	9	Unmodified	_LYQFNPAFF_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7864868044853	2	573.784567	1145.55458	3.5353	0.0020285	-1.3898	-0.00079742	2.1455	0.0012311	573.7834071991995	81.633	0.34012	82.866	82.687	83.027	1.2332					24	10	3	0	0	0	0.11478	1	34290	34290		44.407	28.56	1	1420000			21612	4498	10694	10735	24771	24771					-0.012373555513931933
LYQFNPAFF	9	Unmodified	_LYQFNPAFF_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.7857543826103	2	573.784567	1145.55458	3.1644	0.0018157	-0.51706	-0.00029668	2.6474	0.001519	573.7837609467972	81.24	0.2776	82.936	82.766	83.043	1.6959					22	8	4	0	0	0	0.15478	2	34064	34064;34116		38.151	18.712	1	2517400			21613	4498	10694	10735	24772;24773	24772					-0.012373555513931933
LYQFNPAFF	9	Unmodified	_LYQFNPAFF_					0	0	0		ENST00000586932.5_1_19:39109833-39116793:+|nuORF;ENST00000593062.5_1_19:39109833-39121488:+|nuORF;nc|ENSG00000178982|Q9UBQ5-2|EIF3K;ENSG00000178982|ENST00000248342|EIF3K	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	ENST00000586932.5_1_19:39109833-39116793:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1146.568041980267	1	1146.56186	1145.55458	2.8766	0.0032983	-0.88844	-0.0010186	1.9882	0.0022796	1146.5626653984443	81.216	0.24544	82.912	82.798	83.043	1.6959					12	7	2	0	0	0	0.09539	1	34065	34065		50.855	32.72	1	1962600			21614	4498	10694	10735	24774	24774					-0.012373555513931933
LYQHEINLF	9	Unmodified	_LYQHEINLF_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.8076660037041	2	588.806031	1175.59751	1.6552	0.0009746	0.59821	0.00035223	2.2534	0.0013268	588.806323151986	50.728	0.39281	52.122	51.894	52.287	1.3938					33	12	4	0	0	0	0.031377	1	21228	21228		85.272	27.801	1	5339000			21615	1937	10695	10736	24775	24775					0.016734145060127048
LYQHEINLF	9	Unmodified	_LYQHEINLF_					0	0	0		ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8073608279228	2	588.806031	1175.59751	1.615	0.00095093	0.76664	0.0004514	2.3817	0.0014023	588.8064424198351	50.132	0.42395	52.109	51.914	52.338	1.9772					31	13	4	0	0	0	0.031377	1	21016	21016		85.272	36.926	1	4566600			21616	1937	10695	10736	24776	24776					0.016734145060127048
LYQILQGIVF	10	Unmodified	_LYQILQGIVF_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3521606326103	2	597.350074	1192.6856	4.143	0.0024748	0.10113	6.0409E-05	4.2441	0.0025352	597.3501500384923	94.92	0.39182	95.661	95.487	95.879	0.74123					43	13	4	0	0	0	0.068389	3	39935	39897;39935;39976		71.134	18.148	1	12150000			21617	179	10696	10737	24777;24778;24779	24778					0.09696035096658306
LYQILQGIVF	10	Unmodified	_LYQILQGIVF_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3517944216728	2	597.350074	1192.6856	3.3172	0.0019815	-0.52693	-0.00031476	2.7903	0.0016668	597.3497107281621	94.536	0.49205	95.725	95.464	95.957	1.1887					44	15	4	0	0	0	0.059378	3	39764	39712;39764;39818		74.929	28.908	1	11674000			21618	179	10696	10737	24780;24781;24782	24781					0.09696035096658306
LYQLGPATPF	10	Unmodified	_LYQLGPATPF_					0	0	0			REV__ENSG00000178586|ENST00000641019|OR6B3	REV__ENSG00000178586|ENST00000641019|OR6B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8000366091728	2	553.797675	1105.5808	2.3506	0.0013018	-0.23779	-0.00013169	2.1128	0.0011701	553.79827084497	75.883	0.57653	77.177	76.881	77.458	1.2938					41	18	3	0	0	0	0.65574	1	31795	31795		20.454	3.5113	1	1912000	+		21619	11249	10697	10738	24783	24783					0.03222913620084
LYQPNFNTNF	10	Unmodified	_LYQPNFNTNF_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.2973510622978	2	629.29857	1256.58259	1.4282	0.00089876	0.082114	5.1674E-05	1.5103	0.00095044	629.298293231038	57.031	0.27468	58.446	58.276	58.551	1.4145					19	8	3	0	0	0	0.063958	1	23900	23900		99.799	69.162	1	4065000			21620	5452	10698	10739	24784	24784					-0.03544077361948439
LYQPNFNTNF	10	Unmodified	_LYQPNFNTNF_					0	0	0		ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	ENSG00000273749|ENST00000617928|CYFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.2989379763603	2	629.29857	1256.58259	0.47158	0.00029676	-0.58011	-0.00036506	-0.10854	-6.8301E-05	629.298202026923	56.518	0.24128	58.486	58.334	58.575	1.9684					17	7	3	0	0	0	0.063958	1	23683	23683		99.799	69.162	1	3301700			21621	5452	10698	10739	24785	24785					-0.03544077361948439
LYQRFLREWLV	11	Unmodified	_LYQRFLREWLV_					0	0	0		sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1;sp|P16786|UL49_HCMVAUncharacterizedproteinUL49OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL49PE=3SV=1	sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2920104861259	3	508.289149	1521.84562	2.0367	0.0010352	0.38991	0.00019819	2.4266	0.0012334	508.28937816721225	43.137	2.5523	43.137	42.634	45.187	0					227	81	5	0	0	0	1.0388	1	18325	18325		0.50596	0	1	23254000			21622	15998	10699	10740	24786	24786					0.10556963093699778
LYQRRLRE	8	Unmodified	_LYQRRLRE_					0	0	0			REV__nc|ENSG00000132259|Q8IV77-2|CNGA4	REV__nc|ENSG00000132259|Q8IV77-2|CNGA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3303100466728	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.89176	1	31630	31630		0.79363	0.79363	1	6327800	+		21623	9842	10700	10741	24787	24787					0.0855074758567298
LYRDLALHF	9	Unmodified	_LYRDLALHF_					0	0	0		CEP350|p.M1638Ifs*15|1|0.05|ENSG00000135837|chr1:180053090-180053091|-/ATGGCATAACAACATTGAA|frameshift_variant;ENSG00000135837|ENST00000367607|CEP350	CEP350|p.M1638Ifs*15|1|0.05|ENSG00000135837|chr1:180053090-180053091|-/ATGGCATAACAACATTGAA|frameshift_variant	CEP350|p.M1638Ifs*15|1|0.05|ENSG00000135837|chr1:180053090-180053091|-/ATGGCATAACAACATTGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3213378787041	2	574.316566	1146.61858	3.3336	0.0019145	-0.70854	-0.00040693	2.625	0.0015076	574.8178269504267	60.368	0.3772	62.334	62.105	62.482	1.9653					29	11	3	0	0	0	0.46905	1	25316	25316		16.942	3.0362	1	4748200			21624	149	10701	10742	24788	24788					0.05113424605542605
LYRLKFNEF	9	Unmodified	_LYRLKFNEF_					0	0	0		nc|ENSG00000188042|P56559|ARL4C;ENSG00000188042|ENST00000339728|ARL4C	nc|ENSG00000188042|P56559|ARL4C	nc|ENSG00000188042|P56559|ARL4C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.3396484255791	2	615.337498	1228.66044	2.4445	0.0015042	-0.88278	-0.00054321	1.5617	0.00096097	615.3376970734412	44.724	0.31039	46.089	45.931	46.242	1.3653					18	9	3	0	0	0	0.098163	1	18736	18736		49.933	25.912	1	980930			21625	4848	10702	10743	24789	24789					0.05525980294078181
LYRLKFNEF	9	Unmodified	_LYRLKFNEF_					0	0	0		nc|ENSG00000188042|P56559|ARL4C;ENSG00000188042|ENST00000339728|ARL4C	nc|ENSG00000188042|P56559|ARL4C	nc|ENSG00000188042|P56559|ARL4C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	410.5613281130791	3	410.560758	1228.66044	2.1772	0.00089388	-0.73572	-0.00030206	1.4415	0.00059183	410.5603232461999	44.062	0.50505	46.006	45.734	46.239	1.9438					44	15	4	0	0	0	0.073578	3	18463	18417;18463;18503		53.404	32.533	1	8585600			21626	4848	10702	10743	24790;24791;24792	24791					0.05525980294078181
LYRLKFNEF	9	Unmodified	_LYRLKFNEF_					0	0	0		nc|ENSG00000188042|P56559|ARL4C;ENSG00000188042|ENST00000339728|ARL4C	nc|ENSG00000188042|P56559|ARL4C	nc|ENSG00000188042|P56559|ARL4C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.3382446169853	2	615.337498	1228.66044	2.1031	0.0012941	-0.11678	-7.1859E-05	1.9863	0.0012222	615.3378846658262	44.062	0.31524	46.005	45.831	46.146	1.9438					20	9	3	0	0	0	0.15635	1	18468	18468		37.974	17.52	1	1140800			21627	4848	10702	10743	24793	24793					0.05525980294078181
LYRLWEFI	8	Unmodified	_LYRLWEFI_					0	0	0			REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3160278201103	2	570.316035	1138.61752	2.9443	0.0016792	-1.167	-0.00066554	1.7774	0.0010137	570.3158196123778	62.561	0.80266	63.974	63.392	64.195	1.4134					41	25	2	0	0	0	0.7528	1	26249	26249		25.399	2.2509	1	11084000	+		21628	9758	10703	10744	24794	24794					0.05375210236661587
LYRMVFIAIL	10	Unmodified	_LYRMVFIAIL_					0	0	0		tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8715087771416	2	619.87012	1237.72569	1.6732	0.0010372	-0.38185	-0.0002367	1.2914	0.00080047	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	0.87472	2	33414	33414;33464		7.9102	7.9102	1	8897800			21629	17091	10704	10745	24795;24796	24795					0.11633258495589871
LYRMVFIAIL	10	Unmodified	_LYRMVFIAIL_					0	0	0		tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	tr|A0A7D6ZI02|A0A7D6ZI02_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05055PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.2923461794853	2	619.87012	1237.72569	1.6831	0.0010433	-0.88641	-0.00054946	0.79667	0.00049383	619.8694541892436	78.724	1.1738	80.459	80.319	81.493	1.735					52	37	2	0	0	0	0.12513	1	32982	32982		7.9102	4.3137	1	2771900			21630	17091	10704	10745	24797	24797					0.11633258495589871
LYRNPRFL	8	Unmodified	_LYRNPRFL_					0	0	0		ENSG00000233436|ENST00000422652|BTBD18	ENSG00000233436|ENST00000422652|BTBD18	ENSG00000233436|ENST00000422652|BTBD18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7764160037041	2	539.811451	1077.60835	1.7886	0.00096553	3.9642	0.0021399	5.7529	0.0031055	539.8131098901911	46.341	0.43317	47.716	47.555	47.988	1.3751					20	13	2	0	0	0	0.82039	1	19450	19450		19.439	1.304	1	1543500			21631	5309	10705	10746	24798	24798					0.07264861671001199
LYRPSSVRR	9	Unmodified	_LYRPSSVRR_					0	0	0		ENST00000369331.8_1_10:115439067-115480867:+|nuORF	ENST00000369331.8_1_10:115439067-115480867:+|nuORF	ENST00000369331.8_1_10:115439067-115480867:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3321411013603	2	567.330539	1132.64652	1.4425	0.00081838	0.037577	2.1318E-05	1.4801	0.0008397	567.3305777779763	71.219	0.67462	71.543	71.174	71.848	0.32359					31	20	2	0	0	0	0.83213	1	29766	29766		2.0598	0	1	703680			21632	6096	10706	10747	24799	24799					0.0855074758567298
LYRQYFEEI	9	Unmodified	_LYRQYFEEI_					0	0	0		NCOA5|p.I346Ffs*23|1|0.05|ENSG00000124160|chr20:46063474-46063475|-/TGCTATTGGCCGTCACTGTGCCACTATTGAA|frameshift_variant;ENSG00000124160|ENST00000290231|NCOA5	NCOA5|p.I346Ffs*23|1|0.05|ENSG00000124160|chr20:46063474-46063475|-/TGCTATTGGCCGTCACTGTGCCACTATTGAA|frameshift_variant	NCOA5|p.I346Ffs*23|1|0.05|ENSG00000124160|chr20:46063474-46063475|-/TGCTATTGGCCGTCACTGTGCCACTATTGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	630.8190185427666	2	630.816596	1259.61864	0.9629	0.00060741	2.8097	0.0017724	3.7726	0.0023798	631.3201271619557	45.628	0.22435	47.599	47.471	47.695	1.9703					9	6	2	0	0	0	0.71526	1	19105	19105		6.7232	0.99131	1	266930			21633	2212	10707	10748	24800	24800					-0.0007862018510422786
LYRTEFLY	8	Unmodified	_LYRTEFLY_					0	0	0		tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2914306521416	2	552.78985	1103.56515	2.5297	0.0013984	3.3335	0.0018427	5.8632	0.0032411	553.2925959871824	65.463	0.64659	66.862	66.663	67.31	1.3989					27	20	2	0	0	0	0.68174	1	27427	27427		32.117	0	1	1895300			21634	16472	10708	10749	24801	24801					0.017506271030697462
LYRTEFLY	8	Unmodified	_LYRTEFLY_					0	0	0		tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	tr|A0A553SPI3|A0A553SPI3_NIACIPhosphoenolpyruvate-proteinphosphotransferaseOS=NialliacirculansOX=1397GN=ptsPPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	552.78985	1103.56515	1.3015	0.00071943	7.659	0.0042338	8.9605	0.0049533	552.7952884635755	66.614	0.38168	66.614	66.448	66.829	0	-0.20029	0.0019943	NaN	32.117	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561790			21635	16472	10708	10749							0.017506271030697462
LYRTVERWL	9	Unmodified	_LYRTVERWL_					0	0	0			REV__nc|ENSG00000144645|Q9BXB5-2|OSBPL10	REV__nc|ENSG00000144645|Q9BXB5-2|OSBPL10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3499023318291	2	618.348397	1234.68224	1.6557	0.0010238	-2.3314	-0.0014416	-0.67576	-0.00041786	618.3458965102451	70.251	0.18705	72.088	72.041	72.228	1.8378					10	5	2	0	0	0	0.19075	1	29475	29475		34.102	1.797	1	2014200	+		21636	10257	10709	10750	24802	24802					0.0742878504267992
LYRWIYIVL	9	Unmodified	_LYRWIYIVL_					0	0	0		tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8700439333916	2	619.868434	1237.72232	2.0915	0.0012964	1.33	0.00082441	3.4214	0.0021208	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.75101	1	33474	33474		8.5933	4.264	1	9211600			21637	16090	10710	10751	24803	24803					0.11296331713197105
LYRWIYIVL	9	Unmodified	_LYRWIYIVL_					0	0	0		tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	tr|A0A553SG07|A0A553SG07_NIACIDUF454domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8716308474541	2	619.868434	1237.72232	2.3482	0.0014556	2.1843	0.001354	4.5325	0.0028095	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.75101	1	33206	33206		8.5933	4.264	1	8928300			21638	16090	10710	10751	24804	24804					0.11296331713197105
LYRYRHIL	8	Unmodified	_LYRYRHIL_					0	0	0			REV__nc|ENSG00000170370|Q04743-2|EMX2	REV__nc|ENSG00000170370|Q04743-2|EMX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3329955935478	2	567.33255	1132.65055	1.992	0.0011301	-0.47576	-0.00026991	1.5162	0.00086019	567.3318900643968	41.189	0.2858	43.081	42.864	43.15	1.8927					17	8	3	0	0	0	0.82039	1	17237	17237		19.439	0	1	1038600	+		21639	10983	10711	10752	24805	24805					0.08952837079368692
LYSEVDVHF	9	Unmodified	_LYSEVDVHF_					0	0	0		POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;ENSG00000143442|ENST00000271715|POGZ	POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant	POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7701293826103	2	554.769114	1107.52368	2.2398	0.0012426	-0.73806	-0.00040945	1.5017	0.00083311	554.7685227527248	47.521	1.2334	48.904	48.504	49.737	1.3825					85	38	3	0	0	0	0.01705	6	19834	19789;19834;19872;19912;19966;20020		101.72	59.627	1	5243700			21640	3034	10712	10753	24806;24807;24808;24809;24810;24811	24807					-0.025785536562807465
LYSEVDVHF	9	Unmodified	_LYSEVDVHF_					0	0	0		POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant;nc|ENSG00000143442|Q7Z3K3-5|POGZ;nc|ENSG00000143442|Q7Z3K3-7|POGZ;nc|ENSG00000143442|Q7Z3K3-2|POGZ;nc|ENSG00000143442|Q7Z3K3-3|POGZ;nc|ENSG00000143442|Q7Z3K3-6|POGZ;ENSG00000143442|ENST00000271715|POGZ	POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant	POGZ|p.F673*|1|0.43|ENSG00000143442|chr1:151408733-151408737|ACGGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7700683474541	2	554.769114	1107.52368	2.3103	0.0012817	-0.73556	-0.00040807	1.5747	0.00087361	554.7685737413763	47.104	1.1817	49.08	48.685	49.867	1.976					90	37	4	0	0	0	0.028763	6	19703	19620;19666;19703;19742;19783;19835		89.427	45.654	1	7123900			21641	3034	10712	10753	24812;24813;24814;24815;24816;24817	24814					-0.025785536562807465
LYSEVSHLL	9	Unmodified	_LYSEVSHLL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7879516482353	2	530.787307	1059.56006	1.6052	0.00085202	0.69837	0.00037068	2.3036	0.0012227	530.7875034155255	48.367	0.40329	49.755	49.552	49.956	1.388					33	12	4	0	0	0	0.0017386	3	20236	20190;20236;20287		131.3	53.313	1	6143200			21642	3772	10713	10754	24818;24819;24820	24819					0.032663232404502196
LYSEVSHLL	9	Unmodified	_LYSEVSHLL_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7881347537041	2	530.787307	1059.56006	2.6243	0.001393	-0.46888	-0.00024888	2.1554	0.0011441	530.7868789544814	47.83	0.37124	49.806	49.649	50.021	1.976					32	11	4	0	0	0	0.006164	2	20057	20005;20057		117.6	57.209	1	4003200			21643	3772	10713	10754	24821;24822	24822					0.032663232404502196
LYSGVFVAF	9	Unmodified	_LYSGVFVAF_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;ENST00000496131.1_1_1:44440655-44442052:+|nuORF;ENST00000236067.8_1_1:44440634-44441766:+|nuORF;ENST00000468183.5_1_1:44440655-44441072:+|nuORF	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1002.52647703886	1	1002.5295	1001.52222	1.5272	0.0015311	0.1245	0.00012481	1.6517	0.0016559	1002.5302208575984	79.93	0.31136	81.646	81.506	81.817	1.7167					15	9	2	0	0	0	0.087207	1	33534	33534		53.576	15.424	1	1177000			21644	2006	10714	10755	24823	24823					0.021518570456123598
LYSLQPWSL	9	Unmodified	_LYSLQPWSL_					0	0	0			REV__NAA10|p.I44L|1|0.09|ENSG00000102030|chrX:153933992-153933992|T/G|missense_variant	REV__NAA10|p.I44L|1|0.09|ENSG00000102030|chrX:153933992-153933992|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7989990115166	2	553.797675	1105.5808	2.3506	0.0013018	-0.23779	-0.00013169	2.1128	0.0011701	553.79827084497	75.883	0.57653	77.177	76.881	77.458	1.2938					41	18	3	0	0	0	0.24063	1	31848	31848		28.487	0	1	1912000	+		21645	14371	10715	10756	24824	24824					0.03222913620084
LYSLQPWSL	9	Unmodified	_LYSLQPWSL_					0	0	0			REV__NAA10|p.I44L|1|0.09|ENSG00000102030|chrX:153933992-153933992|T/G|missense_variant	REV__NAA10|p.I44L|1|0.09|ENSG00000102030|chrX:153933992-153933992|T/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	553.797675	1105.5808	2.3506	0.0013018	-0.23779	-0.00013169	2.1128	0.0011701	553.79827084497	75.883	0.57653	77.177	76.881	77.458	1.2938	-0.0094603	0.00043892	NaN	28.487	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1912000	+		21646	14371	10715	10756							0.03222913620084
LYSNDKFSF	9	Unmodified	_LYSNDKFSF_					0	0	0			REV__ENSG00000165059|ENST00000377276|PRKACG	REV__ENSG00000165059|ENST00000377276|PRKACG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7732421755791	2	560.769114	1119.52368	2.9931	0.0016784	2.2645	0.0012699	5.2576	0.0029483	560.7707978531251	62.848	0.55566	64.261	64.103	64.659	1.4134					40	17	3	0	0	0	0.46905	1	26362	26362		16.942	2.3606	1	2278900	+		21647	10763	10716	10757	24825	24825					-0.0313055365627406
LYSPWEPFL	9	Unmodified	_LYSPWEPFL_					0	0	0			REV__ENSG00000173281|ENST00000310455|PPP1R3B	REV__ENSG00000173281|ENST00000310455|PPP1R3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2911254763603	2	576.292225	1150.5699	1.2129	0.00069896	1.5935	0.00091835	2.8064	0.0016173	576.2919299780797	48.603	0.21407	49.991	49.895	50.109	1.388					11	6	2	0	0	0	0.54523	1	20388	20388		13.508	0	1	1099300	+		21648	11093	10717	10758	24826	24826					0.0006351124582124612
LYSQQNPRK	9	Unmodified	_LYSQQNPRK_					0	0	0			REV__tr|A0A553SGN0|A0A553SGN0_NIACIDUF2892domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11160PE=4SV=1	REV__tr|A0A553SGN0|A0A553SGN0_NIACIDUF2892domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_11160PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3057128787041	2	567.306729	1132.59891	3.0239	0.0017155	-1.6896	-0.00095853	1.3343	0.00075696	567.3042007914333	60.411	0.52407	61.831	61.597	62.121	1.4196					34	16	3	0	0	0	0.20671	1	25370	25370		32.305	4.6767	1	3141000	+		21649	14757	10718	10759	24827	24827					0.03791048594803215
LYSRQLYVL	9	Unmodified	_LYSRQLYVL_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1;ENSG00000182179|ENST00000333486|UBA7	ENSG00000130985|ENST00000335972|UBA1;ENSG00000182179|ENST00000333486|UBA7	ENSG00000130985|ENST00000335972|UBA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8356811404228	2	577.832049	1153.64954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.97	1	48.352	47.852	48.852	1.3825								0	0	0	0.28924	1	19670	19670		26.268	5.8536	1				21650	2474;4605	10719	10760	24828	24828					0.07886577919794036
LYSVGARQKR	10	Unmodified	_LYSVGARQKR_					0	0	0		nc|ENSG00000164506|Q5T5C0-3|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;ENSG00000164506|ENST00000321680|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3439208865166	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.89803	2	32341	32341;32444		1.6526	1.6526	1	9065200			21651	3781	10720	10761	24829;24830	24829					0.09147016757151505
LYSVGARQKR	10	Unmodified	_LYSVGARQKR_					0	0	0		nc|ENSG00000164506|Q5T5C0-3|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;ENSG00000164506|ENST00000321680|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3439208865166	2	589.343646	1176.67274	1.9498	0.0011491	-0.65915	-0.00038846	1.2907	0.00076065	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	0.89803	2	32295	32295;32347		1.6526	1.6526	1	8239500			21652	3781	10720	10761	24831;24832	24831					0.09147016757151505
LYSVGARQKR	10	Unmodified	_LYSVGARQKR_					0	0	0		nc|ENSG00000164506|Q5T5C0-3|STXBP5;nc|ENSG00000164506|Q5T5C0-2|STXBP5;ENSG00000164506|ENST00000321680|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	nc|ENSG00000164506|Q5T5C0-3|STXBP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3444091677666	2	589.343646	1176.67274	2.6941	0.0015878	-1.0088	-0.00059453	1.6853	0.00099323	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.87699	1	31635	31635		3.9444	1.6417	1	8587800			21653	3781	10720	10761	24833	24833					0.09147016757151505
LYSVIKEDF	9	Unmodified	_LYSVIKEDF_					0	0	0		nc|ENSG00000185261|Q8IV33-2|KIAA0825;nc|ENSG00000185261|Q8IV33-3|KIAA0825;nc|ENSG00000185261|Q8IV33|KIAA0825;ENSG00000185261|ENST00000682413|KIAA0825	nc|ENSG00000185261|Q8IV33-2|KIAA0825	nc|ENSG00000185261|Q8IV33-2|KIAA0825	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2972900271416	2	557.294965	1112.57538	2.0824	0.0011605	-1.4896	-0.00083017	0.59278	0.00033035	557.2941841726578	45.57	0.22321	46.945	46.8	47.023	1.3751					11	6	2	0	0	0	0.44512	1	19070	19070		18.146	7.0319	1	600520			21654	4737	10721	10762	24834	24834					0.02359190037600456
LYSVSLALL	9	Unmodified	_LYSVSLALL_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	978.5884887576103	1	978.58701	977.579734	3.2999	0.0032292	-3.8852	-0.003802	-0.58531	-0.00057278	978.5838728863686	80.968	0.3648	82.202	81.983	82.348	1.2332					21	11	3	0	0	0	0.09539	1	34031	34031		50.855	6.448	1	2315100			21655	905	10722	10763	24835	24835					0.09004699251181592
LYSVSLALL	9	Unmodified	_LYSVSLALL_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	978.5869018435478	1	978.58701	977.579734	1.6956	0.0016593	-3.6179	-0.0035404	-1.9223	-0.0018811	978.5849318904252	80.499	0.30399	82.216	82.05	82.354	1.7167					15	9	2	0	0	0	0.03795	1	33778	33778		77.984	7.2688	1	2741100			21656	905	10722	10763	24836	24836					0.09004699251181592
LYSWLFFL	8	Unmodified	_LYSWLFFL_					0	0	0		nc|ENSG00000182557|Q6ZMD2-2|SPNS3	nc|ENSG00000182557|Q6ZMD2-2|SPNS3	nc|ENSG00000182557|Q6ZMD2-2|SPNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2950317263603	2	544.794404	1087.57425	2.7274	0.0014859	-1.5347	-0.00083611	1.1927	0.00064977	544.7937647770049	75.306	0.24805	77.088	77.04	77.288	1.7817					12	7	2	0	0	0	0.72134	1	31611	31611		28.173	3.4993	1	1174400			21657	7942	10723	10764	24837	24837					0.033970204593970266
LYTASVVFL	9	Unmodified	_LYTASVVFL_					0	0	0		nc|ENSG00000183484|Q9UNW8-2|GPR132;nc|ENSG00000183484|Q9UNW8-3|GPR132;ENSG00000183484|ENST00000329797|GPR132	nc|ENSG00000183484|Q9UNW8-2|GPR132	nc|ENSG00000183484|Q9UNW8-2|GPR132	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7959472537041	2	506.789318	1011.56408	3.335	0.0016902	-0.10948	-5.5483E-05	3.2255	0.0016347	506.78923980303574	72.542	0.70778	73.871	73.58	74.288	1.3297					52	22	3	0	0	0	0.1735	2	30530	30530;30584		36.044	0	1	8199400			21658	4653	10724	10765	24838;24839	24838					0.058764127341419226
LYTDIINIF	9	Unmodified	_LYTDIINIF_					0	0	0		ENST00000533377.1_1_8:145066406-145067006:+|nuORF;ENSG00000178719|ENST00000395068|GRINA	ENST00000533377.1_1_8:145066406-145067006:+|nuORF	ENST00000533377.1_1_8:145066406-145067006:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3103515505791	2	556.305332	1110.59611	4.1279	0.0022964	0.95591	0.00053178	5.0838	0.0028282	556.306250299689	92.472	0.29492	93.409	93.244	93.539	0.93623					21	8	3	0	0	0	0.09539	2	38914	38914;38964		50.855	5.5509	1	1339800			21659	4490	10725	10766	24840;24841	24840					0.045237804172757023
LYTDIINIF	9	Unmodified	_LYTDIINIF_					0	0	0		ENST00000533377.1_1_8:145066406-145067006:+|nuORF;ENSG00000178719|ENST00000395068|GRINA	ENST00000533377.1_1_8:145066406-145067006:+|nuORF	ENST00000533377.1_1_8:145066406-145067006:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.3074828982353	2	556.305332	1110.59611	3.2055	0.0017832	0.85486	0.00047556	4.0604	0.0022588	556.3058139130158	92.049	0.35368	93.376	93.182	93.535	1.3269					19	10	2	0	0	0	0.051699	2	38731	38731;38794		67.344	12.57	1	1158900			21660	4490	10725	10766	24842;24843	24842					0.045237804172757023
LYTEAIKFF	9	Unmodified	_LYTEAIKFF_					0	0	0		CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENSG00000038532|ENST00000409790|CLEC16A	CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant	CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3092529177666	2	566.307875	1130.6012	3.1185	0.001766	0.097503	5.5217E-05	3.216	0.0018212	566.3077245861807	65.063	0.59288	66.462	66.039	66.632	1.3989					52	18	4	0	0	0	0.049839	2	27269	27269;27321		68.081	35.775	1	6010000			21661	313	10726	10767	24844;24845	24844					0.04112084279881856
LYTEAIKFF	9	Unmodified	_LYTEAIKFF_					0	0	0		CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant;nc|ENSG00000038532|Q2KHT3-2|CLEC16A;ENSG00000038532|ENST00000409790|CLEC16A	CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant	CLEC16A|p.Q832Rfs*57|1|0.03|ENSG00000038532|chr16:11126000-11126000|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3091308474541	2	566.307875	1130.6012	2.1642	0.0012256	0.26221	0.00014849	2.4265	0.0013741	566.3078904760914	64.55	0.47652	66.478	66.17	66.647	1.928					46	14	4	0	0	0	0.029093	2	27083	27035;27083		88.904	46.809	1	4133200			21662	313	10726	10767	24846;24847	24847					0.04112084279881856
LYTEKFEEF	9	Unmodified	_LYTEKFEEF_					0	0	0		ENSG00000084652|ENST00000373610|TXLNA	ENSG00000084652|ENST00000373610|TXLNA	ENSG00000084652|ENST00000373610|TXLNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.2916137576103	2	603.289879	1204.56521	1.8753	0.0011314	0.61038	0.00036824	2.4857	0.0014996	603.2900988597015	43.488	0.45267	44.841	44.648	45.1	1.3536					49	14	5	0	0	0	0.019486	3	18233	18189;18233;18272		99.755	52.534	1	25163000			21663	1052	10727	10768	24848;24849;24850	24849					-0.028894176876065103
LYTEKFEEF	9	Unmodified	_LYTEKFEEF_					0	0	0		ENSG00000084652|ENST00000373610|TXLNA	ENSG00000084652|ENST00000373610|TXLNA	ENSG00000084652|ENST00000373610|TXLNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.2908813357353	2	603.289879	1204.56521	1.9256	0.0011617	0.23442	0.00014142	2.16	0.0013031	603.2898287898415	42.876	0.47879	44.797	44.57	45.049	1.9211					50	15	4	0	0	0	0.010279	3	17960	17911;17960;18011		107.19	59.438	1	23896000			21664	1052	10727	10768	24851;24852;24853	24852					-0.028894176876065103
LYTHCVKGLV	10	Unmodified	_LYTHCVKGLV_					0	0	0		ENST00000493455.6_1_22:26840650-26860128:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;nc|ENSG00000100099|Q9NQG7-3|HPS4;ENSG00000100099|ENST00000398145|HPS4;HPS4|p.S693Lfs*19|1|0.06|ENSG00000100099|chr22:26453284-26453285|-/GTCCAAAGAAGACGCCCCTAGATTTGAGT|frameshift_variant;nc|ENSG00000100099|Q9NQG7-4|HPS4;ENST00000496385.5_1_22:26849136-26861668:-|nuORF	ENST00000493455.6_1_22:26840650-26860128:-|nuORF	ENST00000493455.6_1_22:26840650-26860128:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.9025146365166	3	378.21096	1131.61105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.755	1	40.052	39.552	40.552	1.2961								0	0	0	0.65846	1	16261	16261		6.6304	0.43853	1				21665	1240	10728	10769	24854	24854					0.05050949013616446
LYTHEEYI	8	Unmodified	_LYTHEEYI_					0	0	0		nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5;ENSG00000139990|ENST00000341516|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	534.7953979372978	2	534.25584	1066.49713	1.9436	0.0010384	1.2553	0.00067063	3.1989	0.001709	534.2559161631524	46.486	0.27194	48.457	48.315	48.587	1.9703					12	8	2	0	0	0	2.3239	1	19439	19439		0.79363	0	1	735040			21666	2899	10729	10770	24855	24855					-0.03346242547627298
LYTHEEYI	8	Unmodified	_LYTHEEYI_					0	0	0		nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5;ENSG00000139990|ENST00000341516|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	534.25584	1066.49713	1.9921	0.0010643	1.6315	0.00087162	3.6235	0.0019359	534.2558680575534	48.56	0.28155	48.56	48.399	48.68	0	0.10185	-0.0012743	NaN	0.79363	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	584130			21667	2899	10729	10770							-0.03346242547627298
LYTHEEYI	8	Unmodified	_LYTHEEYI_					0	0	0		nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5;ENSG00000139990|ENST00000341516|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.25584	1066.49713	1.8285	0.0009769	4.5623	0.0024374	6.3908	0.0034143	534.2585487856311	48.179	0.18619	48.51	48.43	48.616	0.33034	0.051725	0.0018573	NaN	0.79363	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	544820			21668	2899	10729	10770							-0.03346242547627298
LYTHEEYI	8	Unmodified	_LYTHEEYI_					0	0	0		nc|ENSG00000139990|Q96JK2-2|DCAF5;nc|ENSG00000139990|Q96JK2-3|DCAF5;ENSG00000139990|ENST00000341516|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	nc|ENSG00000139990|Q96JK2-2|DCAF5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	534.25584	1066.49713	2.1374	0.0011419	3.0489	0.0016289	5.1863	0.0027708	534.2583941122102	46.923	0.19112	48.306	48.187	48.378	1.3825	-0.15213	0.00024023	NaN	0.79363	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	787590			21669	2899	10729	10770							-0.03346242547627298
LYTKPQRL	8	Unmodified	_LYTKPQRL_					0	0	0		ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	ENSG00000145642|ENST00000389074|SHISAL2B	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8072997927666	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.346	1	66.274	65.774	66.774	1.928								0	0	0	1.0178	1	26996	26996		13.508	3.3245	1				21670	3115	10730	10771	24856	24856					0.08902039576844345
LYTLQGLYL	9	Unmodified	_LYTLQGLYL_					0	0	0		ENSG00000172893|ENST00000355527|DHCR7	ENSG00000172893|ENST00000355527|DHCR7	ENSG00000172893|ENST00000355527|DHCR7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3097411990166	2	542.307875	1082.6012	2.8691	0.001556	0.3204	0.00017375	3.1895	0.0017297	542.3085099768842	62.06	0.57196	63.478	63.27	63.842	1.4177					31	17	3	0	0	0	0.20671	1	26069	26069		32.305	2.4649	1	6246100			21671	4259	10731	10772	24857	24857					0.06320084279900584
LYTPVLIRF	9	Unmodified	_LYTPVLIRF_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1;ENST00000528096.1_1_11:67766987-67770655:-|nuORF;ENST00000530138.3_1_11:67766987-67771573:-|nuORF	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3414184451103	2	561.33951	1120.66447	2.9032	0.0016297	0.031502	1.7683E-05	2.9347	0.0016474	561.3393109795134	70.897	0.60827	72.246	72.028	72.636	1.3486					63	19	4	0	0	0	0.023786	3	29744	29707;29744;29783		96.285	45.847	1	37703000			21672	1692	10732	10773	24858;24859;24860	24859					0.10896069787804663
LYTPVLIRF	9	Unmodified	_LYTPVLIRF_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1;ENST00000528096.1_1_11:67766987-67770655:-|nuORF;ENST00000530138.3_1_11:67766987-67771573:-|nuORF	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3406860232353	2	561.33951	1120.66447	1.6991	0.00095375	0.024866	1.3958E-05	1.7239	0.00096771	561.3392996724299	70.376	0.73172	72.214	71.979	72.711	1.8378					66	23	4	0	0	0	0.0054014	3	29484	29484;29534;29619		120.45	76.592	1	30092000			21673	1692	10732	10773	24861;24862;24863	24861					0.10896069787804663
LYTPYMWDF	9	Unmodified	_LYTPYMWDF_					0	0	0			REV__ENST00000519256.5_1_5:170585477-170669877:+|nuORF	REV__ENST00000519256.5_1_5:170585477-170669877:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.5206481814384	3	412.519571	1234.53688	4.6181	0.001905	-2.6469	-0.0010919	1.9712	0.00081315	412.51818828487876	88.572	0.35389	90.019	89.856	90.21	1.4467					15	10	2	0	0	0	0.76103	1	37328	37328		4.897	0	1	803970	+		21674	11802	10733	10774	24864	24864					-0.07100438868542369
LYTTSLATL	9	Unmodified	_LYTTSLATL_					0	0	0		ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7728149294853	2	491.776408	981.538263	1.7047	0.00083831	-3.4388	-0.0016911	-1.7341	-0.00085281	491.7742528113553	71.787	0.37477	73.129	72.967	73.342	1.3415					20	11	2	0	0	0	0.11478	1	30105	30105		44.407	4.4497	1	1845100			21675	4890	10734	10775	24865	24865					0.04675518491865205
LYVASRNGLF	10	Unmodified	_LYVASRNGLF_					0	0	0		sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3198119997978	2	570.314023	1138.61349	2.9443	0.0016792	2.3598	0.0013458	5.3041	0.003025	570.3158196123778	62.561	0.80266	63.974	63.392	64.195	1.4134					41	25	2	0	0	0	0.45795	1	26187	26187		29.841	7.1043	1	11084000			21676	15974	10735	10776	24866	24866					0.04973120742943138
LYVASRNGLF	10	Unmodified	_LYVASRNGLF_					0	0	0		sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3182861208916	2	570.314023	1138.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.974	1	63.931	63.431	64.431	1.9571								0	0	0	0.30792	1	26001	26001		32.786	7.3864	1				21677	15974	10735	10776	24867	24867					0.04973120742943138
LYVGKIPGF	9	Unmodified	_LYVGKIPGF_					0	0	0		ENST00000488620.5_1_9:116327559-116353744:+|nuORF	ENST00000488620.5_1_9:116327559-116353744:+|nuORF	ENST00000488620.5_1_9:116327559-116353744:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2930480837822	2	497.292028	992.569503	1.0624	0.00052832	0.13424	6.6759E-05	1.1966	0.00059508	497.29240380400654	56.532	0.21564	57.946	57.847	58.063	1.4145					9	6	2	0	0	0	0.37357	1	23693	23693		21.747	7.8406	1	876270			21678	6888	10736	10777	24868	24868					0.0729213631661878
LYVGKIPGF	9	Unmodified	_LYVGKIPGF_					0	0	0		ENST00000488620.5_1_9:116327559-116353744:+|nuORF	ENST00000488620.5_1_9:116327559-116353744:+|nuORF	ENST00000488620.5_1_9:116327559-116353744:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	497.292028	992.569503	0.97201	0.00048337	0.14421	7.1714E-05	1.1162	0.00055509	497.2923578253633	55.983	0.2165	57.951	57.841	58.057	1.9684	0.0024551	5.0862E-06	NaN	21.747	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	975070			21679	6888	10736	10777							0.0729213631661878
LYVHSLDDTE	10	Unmodified	_LYVHSLDDTE_					0	0	0		nc|ENSG00000136444|Q9HA92-2|RSAD1	nc|ENSG00000136444|Q9HA92-2|RSAD1	nc|ENSG00000136444|Q9HA92-2|RSAD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.2805053591728	2	596.280043	1190.54553	2.1833	0.0013019	0.26284	0.00015673	2.4462	0.0014586	596.2798982690609	44.395	0.21589	44.395	44.256	44.472	0					10	6	2	0	0	0	0.81324	1	18585	18585		10.824	0	1	800170			21680	7877	10737	10778	24869	24869					-0.04211793698368638
LYVLGWFL	8	Unmodified	_LYVLGWFL_					0	0	0		ENST00000426431.2_1_12:53806226-53806493:+|nuORF	ENST00000426431.2_1_12:53806226-53806493:+|nuORF	ENST00000426431.2_1_12:53806226-53806493:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	505.2893859744072	2	505.789121	1009.56369	2.254	0.00114	1.6344	0.00082667	3.8884	0.0019667	505.7900723169621	63.162	0.25257	65.106	65.027	65.279	1.9444					11	7	2	0	0	0	2.3239	1	26513	26513		11.114	0	1	1038900			21681	6468	10738	10779	24870	24870					0.05929037804946802
LYVLIRKLL	9	Unmodified	_LYVLIRKLL_					0	0	0			REV__ENST00000369535.4_1_1:115247982-115248144:-|nuORF	REV__ENST00000369535.4_1_1:115247982-115248144:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.7465087771416	3	377.59351	1129.7587	1.1772	0.0004445	0.50869	0.00019208	1.6859	0.00063658	377.5938569506113	67.793	0.69911	69.171	68.946	69.645	1.3778					37	22	2	0	0	0	0.11685	1	28427	28427		5.2969	0.39987	1	787050	+		21682	12647	10739	10780	24871	24871					0.19901208609940113
LYVPVFWDL	9	Unmodified	_LYVPVFWDL_					0	0	0			REV__ENST00000381348.4_2_22:42353689-42353893:+|nuORF	REV__ENST00000381348.4_2_22:42353689-42353893:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3121215701103	2	576.310418	1150.60628	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.936	1	64.349	63.849	64.849	1.4134								0	0	0	0.30487	1	26398	26398		18.135	1.0221	1		+		21683	11820	10740	10781	24872	24872					0.03700388142533484
LYVRRDFI	8	Unmodified	_LYVRRDFI_					0	0	0		ENST00000530115.1_1_11:27910903-27911533:-|nuORF	ENST00000530115.1_1_11:27910903-27911533:-|nuORF	ENST00000530115.1_1_11:27910903-27911533:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3117553591728	2	541.311284	1080.60801	1.9829	0.0010734	-0.62895	-0.00034046	1.354	0.00073292	541.3107388402296	82.606	0.30619	82.606	82.43	82.737	0					16	9	2	0	0	0	0.88958	1	34447	34447		2.8892	0	1	1774600			21684	7159	10741	10782	24873	24873					0.07093441951133173
LYVTLLMTPF	10	Unmodified	_LYVTLLMTPF_					0	0	0			REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	REV__ENST00000503808.5_1_4:57204874-57250274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3328735232353	2	599.333036	1196.65152	3.1738	0.0019022	-3.606	-0.0021612	-0.43222	-0.00025904	599.3301852918252	74.806	0.37461	76.112	75.905	76.28	1.3063					28	11	3	0	0	0	0.41677	1	31373	31373		32.305	11.852	1	2303400	+		21685	13521	10742	10783	24874	24874					0.061058706133962914
LYVVDLKKF	9	Unmodified	_LYVVDLKKF_					0	0	0		ENSG00000102595|ENST00000376747|UGGT2;nc|ENSG00000136731|Q9NYU2-2|UGGT1;ENSG00000136731|ENST00000259253|UGGT1	ENSG00000102595|ENST00000376747|UGGT2	ENSG00000102595|ENST00000376747|UGGT2	MSMS	GG20161007_CRH_Patient100_W632_01	3	375.5625488162041	3	375.561987	1123.66413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.927	1	48.31	47.81	48.81	1.3825								0	0	0	0.15496	1	19653	19653		29.437	3.4165	1				21686	1396	10743	10784	24875	24875					0.10724650067936636
LYVVKLGMI	9	Unmodified	_LYVVKLGMI_					0	0	0		tr|A0A7D7ADN6|A0A7D7ADN6_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23510PE=4SV=1	tr|A0A7D7ADN6|A0A7D7ADN6_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23510PE=4SV=1	tr|A0A7D7ADN6|A0A7D7ADN6_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23510PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.6243163943291	2	518.317189	1034.61982	2.5538	0.0013237	-2.5295	-0.0013111	0.024217	1.2552E-05	518.317086503125	47.165	0.31505	49.141	48.966	49.282	1.976					20	9	3	0	0	0	0.10591	1	19790	19790		12.532	0.89125	1	2428500			21687	17328	10744	10785	24876	24876					0.10389922650119843
LYVWDWQRH	9	Unmodified	_LYVWDWQRH_					0	0	0		ENST00000474352.5_1_1:151338696-151341653:-|nuORF;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;SELENBP1|p.V361Sfs*40|1|0.21|ENSG00000143416|chr1:151365199-151365245|AGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCTCCAGCACTTGCAC/-|frameshift_variant;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;ENSG00000143416|ENST00000368868|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8822814822197	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.859	1	11.621	11.121	12.121	0.76165								0	0	0	0.42693	1	4513	4513		1.1933	0	1				21688	3031	10745	10786	24877	24877					-0.008209586512521128
LYVWDWQRH	9	Unmodified	_LYVWDWQRH_					0	0	0		ENST00000474352.5_1_1:151338696-151341653:-|nuORF;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;SELENBP1|p.V361Sfs*40|1|0.21|ENSG00000143416|chr1:151365199-151365245|AGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCTCCAGCACTTGCAC/-|frameshift_variant;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;ENSG00000143416|ENST00000368868|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827087283134	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.994	1	11.756	11.256	12.256	0.76165								0	0	0	0.42693	1	4569	4569		1.1933	0	1				21689	3031	10745	10786	24878	24878					-0.008209586512521128
LYVWDWQRH	9	Unmodified	_LYVWDWQRH_					0	0	0		ENST00000474352.5_1_1:151338696-151341653:-|nuORF;ENST00000427977.6_1_1:151337413-151341586:-|nuORF;ENST00000455397.5_1_1:151337021-151341586:-|nuORF;ENST00000443708.5_1_1:151337021-151341586:-|nuORF;SELENBP1|p.V361Sfs*40|1|0.21|ENSG00000143416|chr1:151365199-151365245|AGGGGCTCTGGCTGGGACTTTAGTTCCTCGTCCTCCAGCACTTGCAC/-|frameshift_variant;nc|ENSG00000143416|Q13228-2|SELENBP1;nc|ENSG00000143416|Q13228-3|SELENBP1;ENSG00000143416|ENST00000368868|SELENBP1;nc|ENSG00000143416|Q13228-4|SELENBP1	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	ENST00000474352.5_1_1:151338696-151341653:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8822509646416	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.222	1	11.984	11.484	12.484	0.76165								0	0	0	0.42693	1	4662	4662		1.1933	0	1				21690	3031	10745	10786	24879	24879					-0.008209586512521128
LYWLLHVI	8	Unmodified	_LYWLLHVI_					0	0	0		nc|ENSG00000169379|Q3SXY8-2|ARL13B;nc|ENSG00000169379|Q3SXY8-3|ARL13B;ENSG00000169379|ENST00000394222|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	nc|ENSG00000169379|Q3SXY8-2|ARL13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3160888552666	2	528.81567	1055.61679	1.8121	0.00095826	3.8536	0.0020378	5.6657	0.0029961	528.8174646653434	71.559	0.31752	71.882	71.72	72.037	0.32359					14	9	2	0	0	0	0.87655	1	29920	29920		11.114	1.767	1	640630			21691	4087	10746	10787	24880	24880					0.09120415587608477
LYWLVGNVL	9	Unmodified	_LYWLVGNVL_					0	0	0			REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|153|1|anti-sense	REV__Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|153|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3111450076103	2	538.810585	1075.60662	1.9272	0.0010384	-2.5544	-0.0013763	-0.62716	-0.00033792	539.3101848391872	46.503	0.18317	47.878	47.773	47.956	1.3751					9	5	2	0	0	0	0.46905	1	19490	19490		16.942	1.0951	1	746070	+		21692	14172	10747	10788	24881	24881					0.07183807862384128
LYYDAIWHF	9	Unmodified	_LYYDAIWHF_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.2971069216728	2	614.295299	1226.57605	2.7022	0.00166	0.16123	9.9044E-05	2.8634	0.001759	614.2954627178706	75.053	1.6221	76.359	76.09	77.712	1.3063					136	52	5	0	0	0	0.02596	6	31486	31441;31486;31525;31578;31634;31689		93.883	66.255	1	93308000			21693	3826	10748	10789	24882;24883;24884;24885;24886;24887	24883					-0.02817970522687574
LYYDAIWHF	9	Unmodified	_LYYDAIWHF_					0	0	0		nc|ENSG00000165272|Q92482-2|AQP3;ENSG00000165272|ENST00000297991|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	nc|ENSG00000165272|Q92482-2|AQP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.2963134646416	2	614.295299	1226.57605	2.7566	0.0016934	-0.062333	-3.8291E-05	2.6942	0.0016551	614.2953173119802	74.624	1.2183	76.405	76.099	77.318	1.7817					110	38	6	0	0	0	0.02596	7	31263	31221;31263;31302;31341;31381;31424;31480		93.883	66.255	1	94466000			21694	3826	10748	10789	24888;24889;24890;24891;24892;24893;24894	24889					-0.02817970522687574
LYYFSYHI	8	Unmodified	_LYYFSYHI_					0	0	0		CON__Q3Y5Z3	CON__Q3Y5Z3	CON__Q3Y5Z3	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2734252810478	2	553.271293	1104.52803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.991	1	58.406	57.906	58.906	1.4145								0	0	0	1.0178	1	23886	23886		11.114	1.767	1			+	21695	360	10749	10790	24895	24895					-0.020050444427170078
LYYIGGEVF	9	Unmodified	_LYYIGGEVF_					0	0	0		nc|ENSG00000166949|P84022-4|SMAD3;nc|ENSG00000166949|P84022-3|SMAD3;nc|ENSG00000166949|P84022-2|SMAD3;ENSG00000166949|ENST00000327367|SMAD3;nc|ENSG00000175387|Q15796-2|SMAD2;ENSG00000175387|ENST00000262160|SMAD2	nc|ENSG00000166949|P84022-4|SMAD3	nc|ENSG00000166949|P84022-4|SMAD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1060.530688464642	1	1060.53497	1059.5277	2.2229	0.0023574	-3.6684	-0.0038905	-1.4455	-0.001533	1060.529830182108	70.477	0.21342	72.315	72.198	72.411	1.8378					9	6	2	0	0	0	0.18999	1	29570	29570		34.187	11.451	1	1275700			21696	3938	10750	10791	24896	24896					0.00031535837410956447
LYYIGGEVF	9	Unmodified	_LYYIGGEVF_					0	0	0		nc|ENSG00000166949|P84022-4|SMAD3;nc|ENSG00000166949|P84022-3|SMAD3;nc|ENSG00000166949|P84022-2|SMAD3;ENSG00000166949|ENST00000327367|SMAD3;nc|ENSG00000175387|Q15796-2|SMAD2;ENSG00000175387|ENST00000262160|SMAD2	nc|ENSG00000166949|P84022-4|SMAD3	nc|ENSG00000166949|P84022-4|SMAD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1060.53497	1059.5277	3.3469	0.0035495	-4.7671	-0.0050557	-1.4202	-0.0015062	1060.5288151212176	70.985	0.24102	72.326	72.179	72.42	1.3415	0.0058904	-0.0003491	NaN	34.187	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1244900			21697	3938	10750	10791							0.00031535837410956447
LYYIKLRSLP	10	Unmodified	_LYYIKLRSLP_					0	0	0			REV__ENST00000374199.8_1_9:116054008-116054197:+|nuORF	REV__ENST00000374199.8_1_9:116054008-116054197:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1956970095634	4	317.195862	1264.75434	-0.81714	-0.00025919	0.75063	0.0002381	-0.066502	-2.1094E-05	317.19604679544847	34.045	0.33438	35.32	35.187	35.522	1.2746					85	35	3	0	0	0	0.88508	1	14326	14326		3.0723	0.22898	1	60683000	+		21698	12703	10751	10792	24897	24897					0.13255699396358978
LYYINLLPL	9	Unmodified	_LYYINLLPL_					0	0	0			REV__ENST00000469150.1_1_1:46763228-46764055:-|nuORF	REV__ENST00000469150.1_1_1:46763228-46764055:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3425781130791	2	561.333893	1120.65323	1.6523	0.00092751	0.13214	7.4176E-05	1.7845	0.0010017	561.3336565127715	68.601	1.0465	70.454	70.056	71.103	1.853					80	33	5	0	0	0	0.64949	1	28933	28933		9.3474	0	1	61570000	+		21699	9837	10752	10793	24898	24898					0.09773247693647136
LYYKYFLKK	9	Unmodified	_LYYKYFLKK_					0	0	0		tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3691894412041	2	633.368267	1264.72198	2.0779	0.0013161	-0.29749	-0.00018842	1.7804	0.0011277	633.3675260009301	78.104	0.78809	78.104	77.841	78.629	0					44	24	3	0	0	0	0.83213	1	32515	32515		2.0598	0.40713	1	947830			21700	16732	10753	10794	24899	24899					0.10020911993342452
LYYKYFLKK	9	Unmodified	_LYYKYFLKK_					0	0	0		tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.8718139529228	2	633.368267	1264.72198	2.0542	0.001301	0.56859	0.00036012	2.6227	0.0016612	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	0.83213	1	33098	33098		2.0598	0.40713	1	2722600			21701	16732	10753	10794	24900	24900					0.10020911993342452
LYYKYFLKK	9	Unmodified	_LYYKYFLKK_					0	0	0		tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	tr|A0A7D6VNF7|A0A7D6VNF7_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_18710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3682739138603	2	633.368267	1264.72198	1.7681	0.0011199	0.95714	0.00060622	2.7253	0.0017261	633.3684879528284	77.983	0.63612	78.292	77.974	78.61	0.30933					31	19	2	0	0	0	0.84963	1	32585	32585		0.6015	0.076735	1	704790			21702	16732	10753	10794	24901	24901					0.10020911993342452
LYYLAHLL	8	Unmodified	_LYYLAHLL_					0	0	0		tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	502.7591735720634	2	503.292028	1004.5695	2.0012	0.0010072	-1.7829	-0.00089733	0.21824	0.00010984	503.2914488896281	67.456	0.15752	68.834	68.757	68.914	1.3778					8	4	2	0	0	0	2.3239	1	28297	28297		32.454	8.2437	1	825210			21703	16288	10754	10795	24902	24902					0.06740136316591361
LYYMYANIM	9	Unmodified	_LYYMYANIM_					0	0	0		nc|ENSG00000133805|Q01432-6|AMPD3;nc|ENSG00000133805|Q01432-3|AMPD3;ENSG00000133805|ENST00000396553|AMPD3;nc|ENSG00000133805|Q01432-5|AMPD3;nc|ENSG00000133805|Q01432-4|AMPD3;ENST00000534047.5_1_11:10518329-10527428:+|nuORF	nc|ENSG00000133805|Q01432-6|AMPD3	nc|ENSG00000133805|Q01432-6|AMPD3	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5184814333916	3	394.517173	1180.52969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.58	1	30.862	30.362	31.362	1.2825								0	0	0	0.42693	1	12411	12411		1.1933	0.12188	1				21704	2582	10755	10796	24903	24903					-0.053354947406432984
LYYQPIIRL	9	Unmodified	_LYYQPIIRL_					0	0	0		tr|A0A7D7A0K3|A0A7D7A0K3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10355PE=4SV=1	tr|A0A7D7A0K3|A0A7D7A0K3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10355PE=4SV=1	tr|A0A7D7A0K3|A0A7D7A0K3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10355PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	394.2412902712822	3	393.569253	1177.68593	1.0075	0.00039653	-0.10296	-4.0524E-05	0.90456	0.00035601	393.5689507197188	38.564	0.25454	40.4	40.304	40.558	1.8366					13	7	2	0	0	0	0.11027	1	16157	16157		17.113	4.8722	1	1049500			21705	17226	10756	10797	24904	24904					0.10419454816496909
LYYRMMYI	8	Unmodified	_LYYRMMYI_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|221|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|221|2|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|221|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.7830078005791	2	576.782656	1151.55076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.504	1	54.504	54.004	55.004	0								0	0	0	1.0178	1	22715	22715		13.508	0.97634	1				21706	7735	10757	10798	24905	24905					-0.01895484641090661
MAAAWPLLL	9	Oxidation (M)	_M(Oxidation (M))AAAWPLLL_		M(1)AAAWPLLL		M(46)AAAWPLLL	0	0	1		nc|ENSG00000073008|P15151-3|PVR;nc|ENSG00000073008|P15151-2|PVR;nc|ENSG00000073008|P15151-4|PVR;nc|ENSG00000073008|P15151|PVR;ENSG00000073008|ENST00000425690|PVR;PVR-HPN|3|fusion;PVR-HPN|1|fusion;PVR-HPN|2|fusion	nc|ENSG00000073008|P15151-3|PVR	nc|ENSG00000073008|P15151-3|PVR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2795287966728	2	501.278063	1000.54157	5.8028	0.0029088	-1.7221	-0.00086326	4.0807	0.0020455	501.2772900128498	89.003	0.58035	90.059	89.691	90.271	1.0562					36	17	3	0	0	0	0.11074	2	37458	37458;37514		45.75	21.076	1	1561100			21707	894	10758	10799	24906;24907	24906		15			0.04132490064887406
MAAEFIQQF	9	Unmodified	_MAAEFIQQF_					0	0	0		nc|ENSG00000073969|P46459-2|NSF;ENSG00000073969|ENST00000398238|NSF	nc|ENSG00000073969|P46459-2|NSF	nc|ENSG00000073969|P46459-2|NSF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7608520388603	2	542.760235	1083.50592	2.3975	0.0013013	-0.86938	-0.00047187	1.5281	0.00082939	542.7598286157133	63.48	0.24183	64.893	64.723	64.965	1.4134					14	7	3	0	0	0	0.24063	1	26633	26633		28.487	6.7402	1	1191100			21708	907	10759	10800	24908	24908					-0.03249592182805827
MAFALPVRV	9	Unmodified	_MAFALPVRV_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2928649783134	2	502.291505	1002.56846	2.1277	0.0010687	0.6351	0.000319	2.7628	0.0013877	502.2918088362174	67.878	0.36338	69.256	69.096	69.459	1.3778					27	11	3	0	0	0	0.24063	1	28504	28504		28.487	3.813	1	3762800	+		21709	9578	10760	10801	24909	24909					0.06727598676047819
MAFALPVRV	9	Unmodified	_MAFALPVRV_					0	0	0			REV__ENSG00000120800|ENST00000261637|UTP20	REV__ENSG00000120800|ENST00000261637|UTP20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.291505	1002.56846	2.1277	0.0010687	0.6351	0.000319	2.7628	0.0013877	502.2918088362174	67.878	0.36338	69.256	69.096	69.459	1.3778	0.047725	-0.0002971	NaN	28.487	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3762800	+		21710	9578	10760	10801							0.06727598676047819
MAFWVKTF	8	Unmodified	_MAFWVKTF_					0	0	0			REV__ENST00000491811.5_1_1:68608485-68620847:-|nuORF	REV__ENST00000491811.5_1_1:68608485-68620847:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	515.3016845583916	2	515.264956	1028.51536	2.3825	0.0012276	-0.45997	-0.00023701	1.9225	0.00099061	515.2655181517539	45.52	0.32175	46.895	46.67	46.992	1.3751					17	9	2	0	0	0	2.3239	1	19026	19026		2.8892	0	1	366890	+		21711	9480	10761	10802	24910	24910					0.002242208933694201
MAGFLWMAM	9	Unmodified	_MAGFLWMAM_					0	0	0			REV__ENST00000320650.8_1_4:142557787-142577401:+|nuORF	REV__ENST00000320650.8_1_4:142557787-142577401:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2344238162041	2	529.237027	1056.4595	2.1625	0.0011445	-2.7801	-0.0014713	-0.61766	-0.00032689	529.2355206078531	68.347	0.59535	70.217	69.949	70.544	1.87					38	18	3	0	0	0	0.39097	1	28634	28634		20.871	0	1	1281300	+		21712	12401	10762	10803	24911	24911					-0.06647071610109379
MAGPKGET	8	Unmodified	_MAGPKGET_					0	0	0		ENST00000482722.5_1_1:40766856-40777859:-|nuORF;ENSG00000049089|ENST00000372748|COL9A2	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	790.3793823122978	1	790.376365	789.369089	2.687	0.0021238	0.82252	0.0006501	3.5095	0.0027739	790.3770584003274	105.01	0.10355	105.17	105.1	105.21	0.15859					10	4	3	0	0	0	0.89008	1	44629	44629		2.5775	1.8871	1	87318000			21713	688	10763	10804	24912	24912					-0.03402081342483143
MAGPKGET	8	Unmodified	_MAGPKGET_					0	0	0		ENST00000482722.5_1_1:40766856-40777859:-|nuORF;ENSG00000049089|ENST00000372748|COL9A2	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	790.3779174685478	1	790.376365	789.369089	2.8603	0.0022608	-0.56496	-0.00044653	2.2954	0.0018142	790.3755702361282	104.96	0.081276	105.13	105.08	105.17	0.16679					9	3	3	0	0	0	0.89008	1	44543	44543		2.5775	0	1	48584000			21714	688	10763	10804	24913	24913					-0.03402081342483143
MAGPKGET	8	Unmodified	_MAGPKGET_					0	0	0		ENST00000482722.5_1_1:40766856-40777859:-|nuORF;ENSG00000049089|ENST00000372748|COL9A2	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	790.376365	789.369089	2.7486	0.0021724	-0.39002	-0.00030826	2.3586	0.0018641	790.3752517346841	105.03	0.063873	105.09	105.06	105.12	0.056801	-0.039405	-0.00067064	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9869100			21715	688	10763	10804							-0.03402081342483143
MAKFAVLVL	9	Unmodified	_MAKFAVLVL_					0	0	0			REV__nc|ENSG00000110080|Q11206-7|ST3GAL4	REV__nc|ENSG00000110080|Q11206-7|ST3GAL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3052551150322	2	496.304081	990.59361	2.5396	0.0012604	-0.76795	-0.00038114	1.7716	0.00087925	496.30363538468043	63.931	0.34513	64.26	64.056	64.401	0.32899					15	10	2	0	0	0	0.83213	1	26794	26794		2.0598	0	1	629720	+		21716	9292	10764	10805	24914	24914					0.0979365347861858
MALEHLVVW	9	Unmodified	_MALEHLVVW_					0	0	0		ENST00000487264.5_1_19:59097551-59102983:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	ENST00000487264.5_1_19:59097551-59102983:+|nuORF	ENST00000487264.5_1_19:59097551-59102983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2960082888603	2	549.294245	1096.57394	1.9015	0.0010445	0.89497	0.0004916	2.7964	0.0015361	549.2947947568825	68.672	0.46811	70.038	69.816	70.284	1.3657					44	14	5	0	0	0	0.042029	2	28837	28793;28837		74.423	46.25	1	6920300			21717	6877	10765	10806	24915;24916	24916					0.029512774678778442
MALEHLVVW	9	Unmodified	_MALEHLVVW_					0	0	0		ENST00000487264.5_1_19:59097551-59102983:+|nuORF;ENST00000606975.1_1_8:163470-182153:-|nuORF	ENST00000487264.5_1_19:59097551-59102983:+|nuORF	ENST00000487264.5_1_19:59097551-59102983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2956420779228	2	549.294245	1096.57394	2.2802	0.0012525	0.032358	1.7774E-05	2.3125	0.0012703	549.2945707743979	68.064	0.49725	69.934	69.704	70.202	1.87					43	15	4	0	0	0	0.069258	2	28575	28529;28575		60.39	32.216	1	7857900			21718	6877	10765	10806	24917;24918	24918					0.029512774678778442
MALGHVIVL	9	Unmodified	_MALGHVIVL_					0	0	0		ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.7863342165947	2	476.786056	951.557558	2.2248	0.0010607	-1.161	-0.00055353	1.0638	0.00050722	476.7856163297265	59.032	0.29477	60.452	60.261	60.556	1.4196					22	9	3	0	0	0	0.20671	1	24735	24735		45.75	9.2838	1	9856600			21719	1466	10766	10807	24919	24919					0.07984196301777047
MALGHVIVL	9	Unmodified	_MALGHVIVL_					0	0	0		ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	476.786056	951.557558	1.8243	0.00086978	-1.2485	-0.00059529	0.57571	0.00027449	476.78586302047	58.482	0.32745	60.451	60.247	60.574	1.969	-0.0001862	-5.4852E-05	NaN	45.75	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6375800			21720	1466	10766	10807							0.07984196301777047
MALGHVIVL	9	Oxidation (M)	_M(Oxidation (M))ALGHVIVL_		M(1)ALGHVIVL		M(46)ALGHVIVL	0	0	1		ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	ENSG00000104613|ENST00000397977|INTS10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7855712771416	2	484.783513	967.552473	1.9029	0.00092251	-0.84761	-0.00041091	1.0553	0.0005116	484.7838532242083	46.753	0.58195	48.728	48.384	48.966	1.9754					31	18	2	0	0	0	0.11074	1	19579	19579		45.75	21.076	1	1142000			21721	1466	10766	10808	24920	24920		25			0.06739892439156847
MARAVDAHQCS	11	Unmodified	_MARAVDAHQCS_					0	0	0			REV__nc|ENSG00000187741|O15360-2|FANCA	REV__nc|ENSG00000187741|O15360-2|FANCA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2704955935478	2	594.766057	1187.51756	2.6335	0.0015663	1.1324	0.00067349	3.7658	0.0022398	594.766750407811	76.77	0.40579	78.064	77.825	78.23	1.2938					49	12	6	0	0	0	0.86077	1	32198	32198		12.175	0.53445	1	4774600	+		21722	11547	10767	10809	24921	24921					-0.06869718431107685
MASALVHIL	9	Oxidation (M)	_M(Oxidation (M))ASALVHIL_		M(1)ASALVHIL		M(50)ASALVHIL	0	0	1		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP;ENST00000459906.1_1_9:124522622-124526156:+|nuORF	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7724182009697	2	485.773145	969.531738	1.8072	0.00087791	0.33301	0.00016177	2.1403	0.0010397	485.77287323270696	46.383	0.46429	47.759	47.586	48.051	1.3751					19	14	2	0	0	0	0.098957	1	19463	19463		49.669	31.534	1	1100100			21723	389	10768	10810	24922	24922		2			0.04575302059504338
MASALVHIL	9	Oxidation (M)	_M(Oxidation (M))ASALVHIL_					0	0	1		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP;ENST00000459906.1_1_9:124522622-124526156:+|nuORF	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	485.773145	969.531738	1.2057	0.00058567	-0.63708	-0.00030948	0.56857	0.00027619	485.77319111958894	45.967	0.39801	47.938	47.758	48.156	1.9703	0.089484	-0.00045523	NaN	49.669	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	967700			21724	389	10768	10810				2			0.04575302059504338
MASALVHIL	9	Unmodified	_MASALVHIL_					0	0	0		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP;ENST00000459906.1_1_9:124522622-124526156:+|nuORF	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7764770388603	2	477.775688	953.536823	1.651	0.00078879	-0.42619	-0.00020362	1.2248	0.00058517	477.77560257894083	54.075	0.38509	55.48	55.291	55.676	1.4048					28	12	3	0	0	0	0.087207	1	22635	22635		53.576	30.427	1	3763100			21725	389	10768	10811	24923	24923					0.05819605922113169
MASALVHIL	9	Unmodified	_MASALVHIL_					0	0	0		DAB2IP-SLC44A4|2|fusion;nc|ENSG00000136848|Q5VWQ8-3|DAB2IP;DAB2IP-SLC44A4|1|fusion;nc|ENSG00000136848|Q5VWQ8-4|DAB2IP;nc|ENSG00000136848|Q5VWQ8-2|DAB2IP;nc|ENSG00000136848|Q5VWQ8-5|DAB2IP;ENSG00000136848|ENST00000408936|DAB2IP;ENST00000459906.1_1_9:124522622-124526156:+|nuORF	DAB2IP-SLC44A4|2|fusion	DAB2IP-SLC44A4|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7759582400322	2	477.775688	953.536823	0.7567	0.00036153	-0.32829	-0.00015685	0.42841	0.00020468	477.77569938995197	53.485	0.3328	55.455	55.325	55.658	1.9697					22	10	3	0	0	0	0.11478	1	22426	22426		44.407	21.259	1	5549000			21726	389	10768	10811	24924	24924					0.05819605922113169
MASLAALQV	9	Unmodified	_MASLAALQV_					0	0	0		ENSG00000157680|ENST00000614521|DGKI;nc|ENSG00000157680|O75912|DGKI	ENSG00000157680|ENST00000614521|DGKI	ENSG00000157680|ENST00000614521|DGKI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	903.4977294802666	1	903.496815	902.489538	2.0273	0.0018317	-0.376	-0.00033972	1.6513	0.0014919	903.4966852255602	61.852	0.30978	62.182	62.012	62.321	0.32974					15	9	2	0	0	0	0.68551	1	25962	25962		7.9102	1.187	1	946940			21727	3478	10769	10812	24925	24925					0.034393266511074216
MAVLMLAALL	10	Unmodified	_MAVLMLAALL_					0	0	0			REV__ENSG00000174684|ENST00000311181|B4GAT1	REV__ENSG00000174684|ENST00000311181|B4GAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3135253787041	2	523.311049	1044.60755	2.6533	0.0013885	2.239	0.0011717	4.8922	0.0025602	523.3131500599106	77.008	0.41338	78.289	78.094	78.507	1.2809					41	12	5	0	0	0	0.70643	1	32302	32302		18.135	2.2878	1	3063600	+		21728	11128	10770	10813	24926	24926					0.08702562915414092
MAVYLVKQL	9	Unmodified	_MAVYLVKQL_					0	0	0		nc|ENSG00000033800|O75925-3|PIAS1;PIAS1|p.T603Qfs*10|1|0.04|ENSG00000033800|chr15:68187684-68187685|-/TCAGTTTATA|frameshift_variant;ENSG00000033800|ENST00000249636|PIAS1;nc|ENSG00000033800|O75925-2|PIAS1;ENST00000564009.1_1_15:68445936-68446074:+|nuORF	nc|ENSG00000033800|O75925-3|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	532.8148071169853	2	532.81227	1063.60999	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.491	1	51.469	50.969	51.969	1.9772								0	0	0	0.0056841	1	20731	20731		97.075	36.685	1				21729	641	10771	10814	24927	24927					0.08072734644724733
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065551638603	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.06072	1	0.21916	-0.28084	0.71916	0.15844								0	0	0	0.42693	1	25	25		0.26902	0.26902	1				21730	4347	10772	10815	24928	24928					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1063720583916	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1867	1	3.2968	2.7968	3.7968	0.11011								0	0	0	0.42693	1	1315	1315		0.26902	0.26902	1				21731	4347	10772	10815	24929	24929					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1061279177666	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3982	1	4.4862	3.9862	4.9862	0.08803								0	0	0	0.42693	1	1818	1818		0.26902	0.26902	1				21732	4347	10772	10815	24930	24930					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1063720583916	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8703	1	6.9467	6.4467	7.4467	0.07632								0	0	0	0.42693	1	2841	2841		0.26902	0.26902	1				21733	4347	10772	10815	24931	24931					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1067687869072	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9487	1	2.5829	2.0829	3.0829	0.63417								0	0	0	0.42693	1	799	799		0.26902	0.26902	1				21734	4347	10772	10815	24932	24932					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1059448122978	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2097	1	7.8368	7.3368	8.3368	0.62713								0	0	0	0.42693	1	2982	2982		0.26902	0.26902	1				21735	4347	10772	10815	24933	24933					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1059753298759	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1427	1	8.7792	8.2792	9.2792	0.63651								0	0	0	0.42693	1	3373	3373		0.26902	0.26902	1				21736	4347	10772	10815	24934	24934					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1065246462822	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8889	1	2.6374	2.1374	3.1374	0.7484								0	0	0	0.42693	1	782	782		0.26902	0.26902	1				21737	4347	10772	10815	24935	24935					-0.20130910504644817
MCCESDSEP	9	Unmodified	_MCCESDSEP_					0	0	0		ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	ENSG00000174945|ENST00000683327|AMZ1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1064330935478	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2092	1	3.9576	3.4576	4.4576	0.7484								0	0	0	0.42693	1	1331	1331		0.26902	0.26902	1				21738	4347	10772	10815	24936	24936					-0.20130910504644817
MCHCMCRE	8	Unmodified	_MCHCMCRE_					0	0	0			REV__ENST00000302351.8_1_5:73923668-73923869:-|nuORF	REV__ENST00000302351.8_1_5:73923668-73923869:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0120117068291	3	338.114511	1011.3217	-1.3306	-0.0004499	0.72769	0.00024604	-0.60294	-0.00020386	338.11472698524665	48.525	0.77998	48.525	48.222	49.002	0					39	24	2	0	0	0	2.3239	1	20194	20194		0	0	1	1387600	+		21739	12317	10773	10816	24937	24937					-0.1835046647265699
MCMTMRGVN	9	Unmodified	_MCMTMRGVN_					0	0	0		tr|A0A553SL64|A0A553SL64_NIACIGTPcyclohydrolase1OS=NialliacirculansOX=1397GN=folEPE=3SV=1	tr|A0A553SL64|A0A553SL64_NIACIGTPcyclohydrolase1OS=NialliacirculansOX=1397GN=folEPE=3SV=1	tr|A0A553SL64|A0A553SL64_NIACIGTPcyclohydrolase1OS=NialliacirculansOX=1397GN=folEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7180663943291	2	521.718675	1041.4228	1.2737	0.00066453	-2.7467	-0.001433	-1.473	-0.00076849	521.7171135971303	69.055	0.45917	70.908	70.709	71.168	1.853					52	14	6	0	0	0	0.42305	1	29002	29002		19.257	1.122	1	7417200			21740	16323	10774	10817	24938	24938					-0.0962569149828596
MCYSDGRSL	9	Unmodified	_MCYSDGRSL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2201415896416	2	516.217877	1030.4212	3.5802	0.0018482	1.4516	0.00074934	5.0318	0.0025975	516.2182405488912	74.314	0.39098	75.632	75.438	75.829	1.318					26	12	3	0	0	0	0.46905	1	31197	31197		16.942	1.0951	1	1802000			21741	4702	10775	10818	24939	24939					-0.09279285991033248
MCYSDGRSL	9	Unmodified	_MCYSDGRSL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	516.217877	1030.4212	2.0854	0.0010765	0.92251	0.00047622	3.0079	0.0015528	516.2180708181467	75.731	0.3177	75.731	75.566	75.884	0	0.050438	-0.00013524	NaN	16.942	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	680960			21742	4702	10775	10818							-0.09279285991033248
MCYSDGRSL	9	Unmodified	_MCYSDGRSL_					0	0	0		ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	ENSG00000184661|ENST00000330560|CDCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.217877	1030.4212	2.642	0.0013638	0.11995	6.1921E-05	2.7619	0.0014258	516.2175665580548	75.309	0.3186	75.633	75.458	75.776	0.32464	-0.047374	-0.00096383	NaN	16.942	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	627330			21743	4702	10775	10818							-0.09279285991033248
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1771728396416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8486	1	3.8486	3.3486	4.3486	0								0	0	0	0.66264	1	1581	1581		0	0	1		+		21744	9330	10776	10819	24940	24940					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1799804568291	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.962	1	3.962	3.462	4.462	0								0	0	0	0.66264	1	1628	1628		0	0	1		+		21745	9330	10776	10819	24941	24941					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1826049685478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.626	1	45.626	45.126	46.126	0								0	0	0	0.66264	1	19090	19090		0	0	1		+		21746	9330	10776	10819	24942	24942					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1834594607353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.759	1	45.759	45.259	46.259	0								0	0	0	0.66264	1	19144	19144		0	0	1		+		21747	9330	10776	10819	24943	24943					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1814453005791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.888	1	45.888	45.388	46.388	0								0	0	0	0.66264	1	19195	19195		0	0	1		+		21748	9330	10776	10819	24944	24944					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1841308474541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.016	1	46.016	45.516	46.516	0								0	0	0	0.66264	1	19247	19247		0	0	1		+		21749	9330	10776	10819	24945	24945					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1868774294853	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.133	1	46.133	45.633	46.633	0								0	0	0	0.66264	1	19294	19294		0	0	1		+		21750	9330	10776	10819	24946	24946					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1863891482353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.258	1	46.258	45.758	46.758	0								0	0	0	0.66264	1	19344	19344		0	0	1		+		21751	9330	10776	10819	24947	24947					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1840087771416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.632	1	51.632	51.132	52.132	0								0	0	0	0.66264	1	21535	21535		0	0	1		+		21752	9330	10776	10819	24948	24948					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1816284060478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.286	1	62.286	61.786	62.786	0								0	0	0	0.66264	1	25967	25967		0	0	1		+		21753	9330	10776	10819	24949	24949					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1859619021416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.017	1	82.017	81.517	82.517	0								0	0	0	0.66264	1	34165	34165		0	0	1		+		21754	9330	10776	10819	24950	24950					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1854736208916	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.533	1	82.533	82.033	83.033	0								0	0	0	0.66264	1	34383	34383		0	0	1		+		21755	9330	10776	10819	24951	24951					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1862670779228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.271	1	83.271	82.771	83.771	0								0	0	0	0.66264	1	34697	34697		0	0	1		+		21756	9330	10776	10819	24952	24952					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1879150271416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.465	1	93.465	92.965	93.965	0								0	0	0	0.66264	1	39063	39063		0	0	1		+		21757	9330	10776	10819	24953	24953					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1814453005791	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.32739	1	0.48583	-0.014172	0.98583	0.15844								0	0	0	0.66264	1	135	135		0	0	1		+		21758	9330	10776	10819	24954	24954					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1813842654228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.376	1	10.454	9.9535	10.954	0.077971								0	0	0	0.66264	1	4302	4302		0	0	1		+		21759	9330	10776	10819	24955	24955					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1808959841728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.202	1	27.464	26.964	27.964	0.26173								0	0	0	0.66264	1	11373	11373		0	0	1		+		21760	9330	10776	10819	24956	24956					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1807739138603	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.411	1	27.683	27.183	28.183	0.27119								0	0	0	0.66264	1	11461	11461		0	0	1		+		21761	9330	10776	10819	24957	24957					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1802856326103	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.244	1	60.572	60.072	61.072	0.32809								0	0	0	0.66264	1	25247	25247		0	0	1		+		21762	9330	10776	10819	24958	24958					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1817504763603	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.526	1	60.854	60.354	61.354	0.32809								0	0	0	0.66264	1	25362	25362		0	0	1		+		21763	9330	10776	10819	24959	24959					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1864501833916	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.22	1	82.5	82	83	0.2802								0	0	0	0.66264	1	34380	34380		0	0	1		+		21764	9330	10776	10819	24960	24960					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1859619021416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.334	1	82.615	82.115	83.115	0.2802								0	0	0	0.66264	1	34428	34428		0	0	1		+		21765	9330	10776	10819	24961	24961					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	610.1844970583916	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.401	1	86.645	86.145	87.145	0.24387								0	0	0	0.66264	1	36133	36133		0	0	1		+		21766	9330	10776	10819	24962	24962					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1795532107353	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1611	1	2.7953	2.2953	3.2953	0.63417								0	0	0	0.66264	1	887	887		0	0	1		+		21767	9330	10776	10819	24963	24963					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1799194216728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0109	1	7.638	7.138	8.138	0.62713								0	0	0	0.66264	1	2899	2899		0	0	1		+		21768	9330	10776	10819	24964	24964					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1799194216728	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.377	1	25.618	25.118	26.118	1.241								0	0	0	0.66264	1	10194	10194		0	0	1		+		21769	9330	10776	10819	24965	24965					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1804077029228	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.56	1	25.801	25.301	26.301	1.241								0	0	0	0.66264	1	10272	10272		0	0	1		+		21770	9330	10776	10819	24966	24966					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1866943240166	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8882	1	4.6334	4.1334	5.1334	0.74525								0	0	0	0.66264	1	1612	1612		0	0	1		+		21771	9330	10776	10819	24967	24967					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1802245974541	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0242	1	4.7694	4.2694	5.2694	0.74525								0	0	0	0.66264	1	1668	1668		0	0	1		+		21772	9330	10776	10819	24968	24968					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1810790896416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5337	1	5.2701	4.7701	5.7701	0.73642								0	0	0	0.66264	1	1878	1878		0	0	1		+		21773	9330	10776	10819	24969	24969					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1786376833916	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6678	1	5.4042	4.9042	5.9042	0.73642								0	0	0	0.66264	1	1935	1935		0	0	1		+		21774	9330	10776	10819	24970	24970					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1806518435478	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.523	1	19.971	19.471	20.471	1.448								0	0	0	0.66264	1	7704	7704		0	0	1		+		21775	9330	10776	10819	24971	24971					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1865722537041	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.977	1	23.593	23.093	24.093	1.6158								0	0	0	0.66264	1	9169	9169		0	0	1		+		21776	9330	10776	10819	24972	24972					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1859619021416	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.104	1	27.821	27.321	28.321	1.7167								0	0	0	0.66264	1	10916	10916		0	0	1		+		21777	9330	10776	10819	24973	24973					-0.24978377356342207
MDDDDSYEDD	10	Unmodified	_MDDDDSYEDD_					0	0	0			REV__nc|ENSG00000111530|Q86VP6-3|CAND1	REV__nc|ENSG00000111530|Q86VP6-3|CAND1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.1838867068291	2	610.182605	1218.35066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.7	1	83.396	82.896	83.896	1.6959								0	0	0	0.66264	1	34277	34277		0	0	1		+		21778	9330	10776	10819	24974	24974					-0.24978377356342207
MDEGKEPQKQL	11	Unmodified	_MDEGKEPQKQL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825561404228	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8455	1	2.9681	2.4681	3.4681	0.12256								0	0	0	0.63775	1	1174	1174		0.094841	0	1				21779	2336	10777	10820	24975	24975					-0.010198002420338526
MDEGKEPQKQL	11	Unmodified	_MDEGKEPQKQL_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8821899294853	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.114	1	5.202	4.702	5.702	0.08803								0	0	0	0.63775	1	2113	2113		0.094841	0	1				21780	2336	10777	10820	24976	24976					-0.010198002420338526
MDLDFPSNL	9	Unmodified	_MDLDFPSNL_					0	0	0		nc|ENSG00000213213|Q5T5S1-3|CCDC183;ENST00000479371.5_1_9:139697227-139701184:+|nuORF;ENST00000415992.5_1_9:139693810-139699267:+|nuORF;nc|ENSG00000213213|Q5T5S1-4|CCDC183;ENST00000430612.5_1_9:139694306-139700853:+|nuORF;ENST00000371682.7_1_9:139690828-139700853:+|nuORF;nc|ENSG00000213213|Q5T5S1-2|CCDC183;ENSG00000213213|ENST00000338005|CCDC183	nc|ENSG00000213213|Q5T5S1-3|CCDC183	nc|ENSG00000213213|Q5T5S1-3|CCDC183	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.7839843630791	2	526.241875	1050.4692	2.8779	0.0015145	-0.064053	-3.3707E-05	2.8138	0.0014808	526.2421999635019	75.155	0.58517	76.461	76.182	76.768	1.3063					36	18	3	0	0	0	0.10844	1	31532	31532		16.942	5.302	1	1204900			21781	5214	10778	10821	24977	24977					-0.054018887993379394
MDLDFPSNL	9	Unmodified	_MDLDFPSNL_					0	0	0		nc|ENSG00000213213|Q5T5S1-3|CCDC183;ENST00000479371.5_1_9:139697227-139701184:+|nuORF;ENST00000415992.5_1_9:139693810-139699267:+|nuORF;nc|ENSG00000213213|Q5T5S1-4|CCDC183;ENST00000430612.5_1_9:139694306-139700853:+|nuORF;ENST00000371682.7_1_9:139690828-139700853:+|nuORF;nc|ENSG00000213213|Q5T5S1-2|CCDC183;ENSG00000213213|ENST00000338005|CCDC183	nc|ENSG00000213213|Q5T5S1-3|CCDC183	nc|ENSG00000213213|Q5T5S1-3|CCDC183	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2435790896416	2	526.241875	1050.4692	2.9058	0.0015291	-0.0093384	-4.9143E-06	2.8964	0.0015242	526.2419472531552	74.73	0.47033	76.512	76.26	76.73	1.7817					21	14	2	0	0	0	0.34572	1	31325	31325		23.148	6.2061	1	1183700			21782	5214	10778	10821	24978	24978					-0.054018887993379394
MDPFNHRIF	9	Unmodified	_MDPFNHRIF_					0	0	0		ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.7847167849541	2	588.784576	1175.5546	1.6159	0.00095141	-2.0485	-0.0012061	-0.43264	-0.00025473	588.7834922669158	34.207	0.48441	34.207	33.946	34.43	0					58	15	5	0	0	0	0.61249	1	14422	14422		10.824	0	1	17809000			21783	6292	10779	10822	24979	24979					-0.02615678823053713
MDPFNHRIF	9	Unmodified	_MDPFNHRIF_					0	0	0		ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.7858154177666	2	588.784576	1175.5546	1.2185	0.00071741	-0.97313	-0.00057296	0.24532	0.00014444	588.784076048752	33.792	0.53629	34.089	33.791	34.327	0.29701					59	17	4	0	0	0	0.61249	2	14104	14104;14272		10.824	0	1	19551000			21784	6292	10779	10822	24980;24981	24980					-0.02615678823053713
MDPFNHRIF	9	Unmodified	_MDPFNHRIF_					0	0	0		ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	ENST00000395526.8_1_10:51946049-51946148:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7845336794853	2	588.784576	1175.5546	0.60145	0.00035412	-1.3917	-0.0008194	-0.79023	-0.00046528	588.7839328273147	32.708	0.55731	33.986	33.67	34.227	1.2782					70	18	5	0	0	0	0.61249	1	13629	13629		10.824	0	1	47272000			21785	6292	10779	10822	24982	24982					-0.02615678823053713
MDPIWQIHH	9	Unmodified	_MDPIWQIHH_					0	0	0		ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.7846557497978	2	588.784576	1175.5546	1.2185	0.00071741	-0.97313	-0.00057296	0.24532	0.00014444	588.784076048752	33.792	0.53629	34.089	33.791	34.327	0.29701					59	17	4	0	0	0	0.32838	2	14196	14196;14235		24.021	4.7636	1	19551000			21786	5574	10780	10823	24983;24984	24983					-0.026156788230309758
MDPIWQIHH	9	Unmodified	_MDPIWQIHH_					0	0	0		ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7836791872978	2	588.784576	1175.5546	0.60145	0.00035412	-1.3917	-0.0008194	-0.79023	-0.00046528	588.7839328273147	32.708	0.55731	33.986	33.67	34.227	1.2782					70	18	5	0	0	0	0.32838	2	13673	13673;13765		24.021	4.7636	1	47272000			21787	5574	10780	10823	24985;24986	24985					-0.026156788230309758
MDPIWQIHH	9	Unmodified	_MDPIWQIHH_					0	0	0		ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	ENST00000244221.8_1_2:71429679-71429715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7837402224541	2	588.784576	1175.5546	0.84867	0.00049968	-1.4117	-0.0008312	-0.56304	-0.00033151	588.7839063247283	32.192	0.60411	34.016	33.669	34.273	1.8246					75	20	5	0	0	0	0.32838	4	13443	13400;13443;13483;13533		24.021	4.7636	1	59539000			21788	5574	10780	10823	24987;24988;24989;24990	24988					-0.026156788230309758
MDRVRRKWG	9	Unmodified	_MDRVRRKWG_					0	0	0		ENST00000506004.5_1_5:141349137-141349176:+|nuORF	ENST00000506004.5_1_5:141349137-141349176:+|nuORF	ENST00000506004.5_1_5:141349137-141349176:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	602.3333007693291	2	602.330016	1202.64548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.958	1	85.958	85.458	86.458	0								0	0	0	0.42693	1	35814	35814		1.8442	0.19162	1				21789	7002	10781	10824	24991	24991					0.05226209945089977
MDSLQILNQD	10	Unmodified	_MDSLQILNQD_					0	0	0		tr|A0A7D6ZVB5|A0A7D6ZVB5_9CLOTBiotin/lipoyl-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03340PE=4SV=1	tr|A0A7D6ZVB5|A0A7D6ZVB5_9CLOTBiotin/lipoyl-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03340PE=4SV=1	tr|A0A7D6ZVB5|A0A7D6ZVB5_9CLOTBiotin/lipoyl-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03340PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.7845336794853	2	588.781896	1175.54924	1.6159	0.00095141	2.5034	0.0014739	4.1193	0.0024253	588.7834922669158	34.207	0.48441	34.207	33.946	34.43	0					58	15	5	0	0	0	0.58279	1	14316	14316		23.79	2.1996	1	17809000			21790	17150	10782	10825	24992	24992					-0.03151447196182744
MDYKAVLF	8	Unmodified	_MDYKAVLF_					0	0	0			REV__tr|A0A7D6VSJ5|A0A7D6VSJ5_9CLOTGalactose/methylgalactosideABCtransporterpermeaseMglCOS=ClostridiumintestinaleOX=36845GN=mglCPE=4SV=1	REV__tr|A0A7D6VSJ5|A0A7D6VSJ5_9CLOTGalactose/methylgalactosideABCtransporterpermeaseMglCOS=ClostridiumintestinaleOX=36845GN=mglCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7550231814384	2	493.754421	985.494289	2.568	0.001268	-0.47553	-0.00023479	2.0925	0.0010332	493.7538661732317	77.113	0.28786	78.394	78.186	78.474	1.2809					15	8	2	0	0	0	0.79422	1	32374	32374		21.747	2.3076	1	1355200	+		21791	15451	10783	10826	24993	24993					0.0009621079387898135
MEILHGVT	8	Unmodified	_MEILHGVT_					0	0	0		ENST00000373202.7_1_10:72619131-72619191:+|nuORF	ENST00000373202.7_1_10:72619131-72619191:+|nuORF	ENST00000373202.7_1_10:72619131-72619191:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.7383605837822	2	450.236396	898.458238	0.95165	0.00042847	-1.2987	-0.00058472	-0.34704	-0.00015625	450.23580323343464	16.725	0.45723	16.876	16.694	17.151	0.15093					25	15	2	0	0	0	0.77833	1	6912	6912		23.148	0	1	1784100			21792	6156	10784	10827	24994	24994					0.004947536170220701
MEILHGVT	8	Unmodified	_MEILHGVT_					0	0	0		ENST00000373202.7_1_10:72619131-72619191:+|nuORF	ENST00000373202.7_1_10:72619131-72619191:+|nuORF	ENST00000373202.7_1_10:72619131-72619191:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1879455447197	3	300.493356	898.458238	-0.94357	-0.00028354	-1.1198	-0.0003365	-2.0634	-0.00062004	300.4929576868771	16.209	0.1855	17.036	16.981	17.166	0.82643					11	9	2	0	0	0	2.3239	1	6728	6728		1.4819	0	1	781680			21793	6156	10784	10827	24995	24995					0.004947536170220701
MEMLEMIL	8	Unmodified	_MEMLEMIL_					0	0	0		ENST00000519604.5_1_20:61919671-61919803:+|nuORF	ENST00000519604.5_1_20:61919671-61919803:+|nuORF	ENST00000519604.5_1_20:61919671-61919803:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2443420290947	2	505.241975	1008.4694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.85	1	103.91	103.41	104.41	0.059502								0	0	0	1.0178	1	43670	43670		0.69038	0	1				21794	7069	10785	10828	24996	24996					-0.03449928395343704
MEMLEMIL	8	Unmodified	_MEMLEMIL_					0	0	0		ENST00000519604.5_1_20:61919671-61919803:+|nuORF	ENST00000519604.5_1_20:61919671-61919803:+|nuORF	ENST00000519604.5_1_20:61919671-61919803:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2433044314384	2	505.241975	1008.4694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.79	1	103.97	103.47	104.47	0.1731								0	0	0	1.0178	1	43790	43790		0.69038	0	1				21795	7069	10785	10828	24997	24997					-0.03449928395343704
METGSLFT	8	Unmodified	_METGSLFT_					0	0	0		nc|ENSG00000163535|Q562F6-3|SGO2;nc|ENSG00000163535|Q562F6-2|SGO2;ENSG00000163535|ENST00000357799|SGO2	nc|ENSG00000163535|Q562F6-3|SGO2	nc|ENSG00000163535|Q562F6-3|SGO2	MSMS	GG20161007_CRH_Patient100_A02_01	1	443.2065917849541	2	443.204761	884.394969	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.01	1	106.01	105.51	106.51	0								0	0	0	1.0178	1	45138	45138		0.79363	0	1				21796	3696	10786	10829	24998	24998					-0.05185231890868636
MEYMTMDSLTP	11	Unmodified	_MEYMTMDSLTP_					0	0	0			REV__ENST00000566319.2_1_16:47699793-47733274:+|nuORF	REV__ENST00000566319.2_1_16:47699793-47733274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.1837036013603	3	440.183642	1317.5291	0.21454	9.4437E-05	1.3718	0.00060384	1.5863	0.00069828	440.18424197425	12.409	0.32945	13.196	13.065	13.395	0.78751					24	10	3	0	0	0	1.0366	1	5195	5195		0.40827	0	1	1192700	+		21797	9086	10787	10830	24999	24999					-0.11696702242647916
MFAEPPMW	8	Unmodified	_MFAEPPMW_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8167297244072	3	336.815442	1007.4245	1.0735	0.00036156	-1.1439	-0.0003853	-0.07049	-2.3742E-05	336.8162806247516	77.912	0.37222	79.664	79.437	79.809	1.7514					38	11	5	0	0	0	0.8873	1	32637	32637		4.3292	0	1	2154600	+		21798	11008	10788	10831	25000	25000					-0.0789199114639132
MFFKKLEKKSR	11	Unmodified	_MFFKKLEKKSR_					0	0	0		tr|A0A7D7A2J7|A0A7D7A2J7_9CLOTMultidrugresistanceeffluxtransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08755PE=4SV=1	tr|A0A7D7A2J7|A0A7D7A2J7_9CLOTMultidrugresistanceeffluxtransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08755PE=4SV=1	tr|A0A7D7A2J7|A0A7D7A2J7_9CLOTMultidrugresistanceeffluxtransporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08755PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2849914431572	3	481.283118	1440.82753	3.4154	0.0016438	0.33097	0.00015929	3.7464	0.0018031	481.28287493317043	88.925	1.4158	89.149	88.809	90.224	0.22359					101	43	3	0	0	0	1.0402	1	37446	37446		0.094841	0	1	2949300			21799	17259	10789	10832	25001	25001					0.1247450484734145
MFFTRMQSF	9	Oxidation (M)	_MFFTRM(Oxidation (M))QSF_		MFFTRM(1)QSF		M(-88)FFTRM(88)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.7733642458916	2	605.772819	1209.53109	1.6979	0.0010285	-0.46142	-0.00027951	1.2364	0.000749	605.772693312145	43.319	0.35677	44.673	44.438	44.795	1.3536					34	11	4	0	0	0	0.02298	2	18165	18110;18165		96.936	67.854	2	2882800			21800	6143	10790	10833	25002;25003	25003		102;103			-0.06529860651880881
MFFTRMQSF	9	Oxidation (M)	_M(Oxidation (M))FFTRMQSF_		M(1)FFTRMQSF		M(64)FFTRM(-64)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.7737304568291	2	605.772819	1209.53109	2.328	0.0014102	-0.56482	-0.00034215	1.7632	0.0010681	605.7726590749076	47.357	0.4183	48.74	48.536	48.954	1.3825					34	12	4	0	0	0	0.032536	2	19813	19813;19861		83.429	51.123	2	3510600			21801	6143	10790	10833	25004;25005	25004		102;103			-0.06529860651880881
MFFTRMQSF	9	Oxidation (M)	_M(Oxidation (M))FFTRMQSF_		M(1)FFTRMQSF		M(76)FFTRM(-76)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.7740966677666	2	605.772819	1209.53109	2.1405	0.0012966	-0.97021	-0.00058772	1.1703	0.00070892	605.7726392604678	47.775	0.49773	49.157	48.954	49.452	1.3825					45	15	4	0	0	0	0.014947	2	20016	19969;20016		103.42	67.292	2	6817200			21802	6143	10790	10833	25006;25007	25007		102;103			-0.06529860651880881
MFFTRMQSF	9	Oxidation (M)	_MFFTRM(Oxidation (M))QSF_		MFFTRM(1)QSF		M(-80)FFTRM(80)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.7735473513603	2	605.772819	1209.53109	1.8219	0.0011036	-0.46776	-0.00028335	1.3541	0.00082029	605.7728928387659	42.663	0.36649	44.584	44.384	44.751	1.9211					36	11	4	0	0	0	0.026411	2	17885	17836;17885		93.166	59.063	2	3731000			21803	6143	10790	10833	25008;25009	25009		102;103			-0.06529860651880881
MFFTRMQSF	9	Oxidation (M)	_M(Oxidation (M))FFTRMQSF_		M(1)FFTRMQSF		M(65)FFTRM(-65)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.7733642458916	2	605.772819	1209.53109	2.1718	0.0013156	-1.0897	-0.0006601	1.0822	0.00065554	605.7723358652077	46.882	0.40994	48.858	48.653	49.063	1.976					36	12	4	0	0	0	0.036104	2	19654	19605;19654		79.596	52.713	2	3446800			21804	6143	10790	10833	25010;25011	25011		102;103			-0.06529860651880881
MFFTRMQSF	9	Oxidation (M)	_M(Oxidation (M))FFTRMQSF_		M(1)FFTRMQSF		M(75)FFTRM(-75)QSF	0	0	1		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.7747680544853	2	605.772819	1209.53109	2.6097	0.0015809	-1.3078	-0.00079226	1.3018	0.00078862	605.7724243853615	47.294	0.86806	49.27	48.999	49.867	1.976					53	25	4	0	0	0	0.026411	2	19811	19811;19862		93.166	57.039	2	5407500			21805	6143	10790	10833	25012;25013	25012		102;103			-0.06529860651880881
MFFTRMQSF	9	Unmodified	_MFFTRMQSF_					0	0	0		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7757446169853	2	597.775362	1193.53617	0.32845	0.00019634	-0.62561	-0.00037398	-0.29716	-0.00017764	597.7754273989993	56.186	0.49033	57.596	57.445	57.935	1.4099					53	17	4	0	0	0	4.7293E-05	4	23511	23511;23559;23606;23654		152.89	99.053	1	26285000			21806	6143	10790	10834	25014;25015;25016;25017	25014					-0.05285556789249313
MFFTRMQSF	9	Unmodified	_MFFTRMQSF_					0	0	0		ENST00000372724.5_1_10:76598507-76602417:+|nuORF;ENST00000372714.5_1_10:76586522-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	ENST00000372724.5_1_10:76598507-76602417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.7755004763603	2	597.775362	1193.53617	0.71524	0.00042755	-1.4806	-0.00088507	-0.76537	-0.00045752	597.7747970493156	55.695	0.46398	57.663	57.469	57.933	1.9684					55	18	4	0	0	0	4.9851E-05	3	23353	23309;23353;23400		151.48	105.78	1	23913000			21807	6143	10790	10834	25018;25019;25020	25019					-0.05285556789249313
MFHSSNPR	8	Unmodified	_MFHSSNPR_					0	0	0			REV__ENSG00000172362|ENST00000641921|OR5B12	REV__ENSG00000172362|ENST00000641921|OR5B12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2314941287041	2	488.226894	974.439234	3.4396	0.0016793	1.4132	0.00068994	4.8527	0.0023692	488.22751127927665	96.555	0.21171	96.66	96.573	96.785	0.105					31	6	7	0	0	0	0.88958	1	40448	40448		2.8892	0	1	50668000	+		21808	11063	10791	10835	25021	25021					-0.04900782954018723
MFLARVPFLFT	11	Unmodified	_MFLARVPFLFT_					0	0	0		nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3;ENSG00000139508|ENST00000266943|SLC46A3;nc|ENSG00000139508|Q7Z3Q1-2|SLC46A3	nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	nc|ENSG00000139508|Q7Z3Q1-3|SLC46A3	MSMS	GG20161007_CRH_Patient100_W632_01	3	671.3764526247978	2	671.373026	1340.7315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.528	1	95.269	94.769	95.769	0.74124								0	0	0	0.63775	1	39773	39773		3.5965	0	1				21809	2878	10792	10836	25022	25022					0.07476357007226397
MFLLLEVVL	9	Unmodified	_MFLLLEVVL_					0	0	0			REV__tr|A0A553SS40|A0A553SS40_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_02365PE=3SV=1	REV__tr|A0A553SS40|A0A553SS40_NIACISporegerminationproteinOS=NialliacirculansOX=1397GN=CEQ21_02365PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8275024294853	2	538.824846	1075.63514	1.6933	0.0009124	1.1082	0.00059712	2.8015	0.0015095	538.8254832307166	94.214	0.40193	94.214	93.994	94.396	0					31	12	3	0	0	0	0.84963	1	39324	39324		0.6015	0.076735	1	2168800	+		21810	15193	10793	10837	25023	25023					0.10034789447308867
MFMPGAFM	8	Unmodified	_MFMPGAFM_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1346008181572	3	311.134006	930.380188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.793	1	94.665	94.165	95.165	0.87176								0	0	0	1.0178	1	39468	39468		0.45834	0	1				21811	15975	10794	10838	25024	25024					-0.08778718564212795
MFMPGAFM	8	Unmodified	_MFMPGAFM_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1349365115166	3	311.134006	930.380188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.11	1	94.851	94.351	95.351	0.74124								0	0	0	1.0178	1	39599	39599		0.45834	0	1				21812	15975	10794	10838	25025	25025					-0.08778718564212795
MFMPGAFM	8	Unmodified	_MFMPGAFM_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1349975466728	3	311.134006	930.380188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.231	1	94.972	94.472	95.472	0.74124								0	0	0	1.0178	1	39650	39650		0.45834	0	1				21813	15975	10794	10838	25026	25026					-0.08778718564212795
MFMPGAFM	8	Unmodified	_MFMPGAFM_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1349670290947	3	311.134006	930.380188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.326	1	95.067	94.567	95.567	0.74124								0	0	0	1.0178	1	39690	39690		0.45834	0	1				21814	15975	10794	10838	25027	25027					-0.08778718564212795
MFMPGAFM	8	Unmodified	_MFMPGAFM_					0	0	0		sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1;sp|F5HCU8|TRM3_HCMVMTripartiteterminasesubunit3OS=Humancytomegalovirus(strainMerlin)OX=295027GN=TRM3PE=3SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1350890994072	3	311.134006	930.380188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.45	1	95.191	94.691	95.691	0.74124								0	0	0	1.0178	1	39741	39741		0.45834	0	1				21815	15975	10794	10838	25028	25028					-0.08778718564212795
MFTVVTLVSI	10	Unmodified	_MFTVVTLVSI_					0	0	0			REV__tr|A0A553SF58|A0A553SF58_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08095PE=4SV=1	REV__tr|A0A553SF58|A0A553SF58_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08095PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3202392458916	2	555.317386	1108.62022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.9	1	103.06	102.56	103.56	0.16445								0	0	0	0.66031	1	43348	43348		3.9444	0	1		+		21816	14690	10795	10839	25029	25029					0.07025297579320977
MFYSQSGN	8	Unmodified	_MFYSQSGN_					0	0	0			REV__nc|ENSG00000151962|Q8TBY0-2|RBM46	REV__nc|ENSG00000151962|Q8TBY0-2|RBM46	MSMS	GG20161007_CRH_Patient100_A02_02	2	467.1932556033134	2	467.192185	932.369817	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.394	1	44.72	44.22	45.22	0.32674								0	0	0	1.0178	1	18640	18640		0.79363	0	1		+		21817	10409	10796	10840	25030	25030					-0.09907286693442074
MFYVPDIKI	9	Unmodified	_MFYVPDIKI_					0	0	0		tr|A0A7D7A417|A0A7D7A417_9CLOTHsp20familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23850PE=3SV=1	tr|A0A7D7A417|A0A7D7A417_9CLOTHsp20familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23850PE=3SV=1	tr|A0A7D7A417|A0A7D7A417_9CLOTHsp20familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23850PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	375.8726379275322	3	375.871944	1124.594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.402	1	46.362	45.862	46.862	1.9596								0	0	0	0.41514	1	18613	18613		4.5289	0	1				21818	17281	10797	10841	25031	25031					0.03669028407807673
MGAAILEK	8	Unmodified	_MGAAILEK_					0	0	0		ENST00000473160.6_1_19:35622134-35624715:-|nuORF	ENST00000473160.6_1_19:35622134-35624715:-|nuORF	ENST00000473160.6_1_19:35622134-35624715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	832.4616577029228	1	832.459701	831.452425	2.8829	0.0023999	-0.42233	-0.00035158	2.4605	0.0020483	832.4593419876667	64.464	0.27534	65.871	65.71	65.985	1.4071					14	8	2	0	0	0	0.62161	1	27064	27064		38.151	6.0342	1	1122900			21819	6765	10798	10842	25032	25032					0.0299565510534876
MGCGSVDE	8	Unmodified	_MGCGSVDE_					0	0	0		JADE3|p.P162S|1|0.04|ENSG00000102221|chrX:47027900-47027900|C/T|missense_variant	JADE3|p.P162S|1|0.04|ENSG00000102221|chrX:47027900-47027900|C/T|missense_variant	JADE3|p.P162S|1|0.04|ENSG00000102221|chrX:47027900-47027900|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.1425964236259	2	399.143846	796.27314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.5	1	102.5	102	103	0								0	0	0	1.0178	1	42954	42954		5.7604	3.1829	1				21820	7661	10799	10843	25033	25033					-0.1331459724490287
MGGHPPGK	8	Unmodified	_MGGHPPGK_					0	0	0			REV__ENST00000374472.4_1_1:24201871-24239835:-|nuORF	REV__ENST00000374472.4_1_1:24201871-24239835:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2842590212822	2	390.694698	779.374843	0.089995	3.5161E-05	0.34526	0.00013489	0.43526	0.00017005	390.69242960738103	16.932	0.18245	18.234	18.112	18.295	1.3023					7	5	2	0	0	0	2.3239	1	7019	7019		2.5775	0	1	121650	+		21821	12705	10800	10844	25034	25034					-0.02366938040165678
MGIKFLEV	8	Unmodified	_MGIKFLEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12171786-12184437:+|nuORF	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.7657958865166	2	468.764789	935.515025	2.4413	0.0011444	0.27246	0.00012772	2.7138	0.0012721	468.76510141295074	63.571	0.4359	63.571	63.366	63.802	0					33	13	3	0	0	0	0.71791	1	26469	26469		28.487	6.7402	1	3178200			21822	793	10801	10845	25035	25035					0.04468801173550219
MGIKFLEV	8	Unmodified	_MGIKFLEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12171786-12184437:+|nuORF	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.7665893435478	2	468.764789	935.515025	2.6048	0.001221	-0.29468	-0.00013813	2.3101	0.0010829	468.7647610373462	62.937	0.43812	63.267	63.067	63.505	0.32974					33	13	3	0	0	0	0.64261	2	26325	26325;26427		36.044	1.9418	1	3248600			21823	793	10801	10845	25036;25037	25036					0.04468801173550219
MGIKFLEV	8	Unmodified	_MGIKFLEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12171786-12184437:+|nuORF	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7666198611259	2	468.764789	935.515025	3.1347	0.0014695	0.49506	0.00023207	3.6298	0.0017015	468.7651857546555	61.615	0.49845	63.032	62.804	63.303	1.4177					35	15	3	0	0	0	0.71791	2	25797	25797;25890		28.487	1.6032	1	3736900			21824	793	10801	10845	25038;25039	25038					0.04468801173550219
MGIKFLEV	8	Unmodified	_MGIKFLEV_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;nc|ENSG00000065665|Q9H9S3-2|SEC61A2;ENST00000495368.1_1_10:12171786-12184437:+|nuORF	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	nc|ENSG00000065665|Q9H9S3-3|SEC61A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.7664367556572	2	468.764789	935.515025	2.9307	0.0013738	0.69286	0.00032479	3.6236	0.0016986	468.7653247256726	61.009	0.48954	62.974	62.76	63.25	1.9653					35	15	3	0	0	0	0.54738	2	25627	25627;25682		44.407	4.4497	1	2890700			21825	793	10801	10845	25040;25041	25040					0.04468801173550219
MGKVIKHLS	9	Unmodified	_MGKVIKHLS_					0	0	0			REV__ENST00000366508.5_1_1:247067318-247068864:-|nuORF	REV__ENST00000366508.5_1_1:247067318-247068864:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2020751833916	3	338.203917	1011.58992	0.17829	6.0298E-05	-3.6469	-0.0012334	-3.4686	-0.0011731	338.20211829550874	26.842	0.46169	28.589	28.495	28.957	1.747					24	14	3	0	0	0	0.82114	1	11237	11237		2.4985	1.0166	1	707200	+		21826	12608	10802	10846	25042	25042					0.08458983704770162
MGLAVFHG	8	Unmodified	_MGLAVFHG_					0	0	0		ENSG00000198742|ENST00000361368|SMURF1;nc|ENSG00000198742|Q9HCE7|SMURF1	ENSG00000198742|ENST00000361368|SMURF1	ENSG00000198742|ENST00000361368|SMURF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2124206423759	2	416.212724	830.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.365	1	29.112	28.612	29.612	1.747								0	0	0	1.0178	1	11453	11453		0.79363	0	1				21827	5074	10803	10847	25043	25043					-0.01109480863317458
MGRLRISP	8	Unmodified	_MGRLRISP_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|207|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|207|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|207|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2708618044853	2	465.271104	928.527655	3.3668	0.0015665	-2.3449	-0.001091	1.0219	0.00047547	465.270199283943	94.196	0.40736	94.341	94.133	94.54	0.14493					27	12	3	0	0	0	0.89051	1	39383	39383		2.3027	0	1	1876900			21828	7621	10804	10848	25044	25044					0.06053257356427366
MGSNEVKLRKW	11	Unmodified	_MGSNEVKLRKW_					0	0	0			REV__ENST00000579431.1_1_18:19747671-19748025:-|nuORF	REV__ENST00000579431.1_1_18:19747671-19748025:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9124328494072	3	449.911573	1346.71289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.46383	1	0.62227	0.12227	1.1223	0.15844								0	0	0	0.63775	1	190	190		0.094841	0	1		+		21829	13996	10805	10849	25045	25045					0.053401953653747114
MGVWHTWRR	9	Unmodified	_MGVWHTWRR_					0	0	0			REV__ENST00000478189.1_1_6:33049883-33051411:+|nuORF	REV__ENST00000478189.1_1_6:33049883-33051411:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	614.8096191287041	2	614.811459	1227.60837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.602	1	45.602	45.102	46.102	0								0	0	0	0.42693	1	19080	19080		4.756	0.42677	1		+		21830	13325	10806	10850	25046	25046					0.0036653839931659604
MGWKQRQR	8	Unmodified	_MGWKQRQR_					0	0	0			REV__ENSG00000165512|ENST00000298299|ZNF22	REV__ENSG00000165512|ENST00000298299|ZNF22	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.2913696169853	2	545.290359	1088.56617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.63	1	44.956	44.456	45.456	0.32674								0	0	0	1.0178	1	18741	18741		0.69038	0	1		+		21831	10784	10807	10851	25047	25047					0.02542562990947772
MHKRSPLL	8	Unmodified	_MHKRSPLL_					0	0	0		nc|ENSG00000118058|Q03164-2|KMT2A;nc|ENSG00000118058|Q03164|KMT2A;ENSG00000118058|ENST00000534358|KMT2A;KMT2A|p.L792Sfs*31|1|0.03|ENSG00000118058|chr11:118473531-118473532|-/AAGT|frameshift_variant;KMT2A|p.P2471Lfs*35|1|0.08|ENSG00000118058|chr11:118503312-118503312|C/-|frameshift_variant	nc|ENSG00000118058|Q03164-2|KMT2A	nc|ENSG00000118058|Q03164-2|KMT2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2878906130791	2	491.286754	980.558955	3.4218	0.0016811	0.72582	0.00035658	4.1476	0.0020377	491.2870120474325	97.592	0.28425	97.683	97.463	97.747	0.090881					14	8	3	0	0	0	0.89051	1	40819	40819		2.3027	0	1	3729900			21832	2028	10808	10852	25048	25048					0.06789830390550833
MHLIEIILTR	10	Unmodified	_MHLIEIILTR_					0	0	0			REV__ENSG00000185958|ENST00000327337|FAM186A	REV__ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8703491091728	2	619.868108	1237.72166	1.988	0.0012323	2.4521	0.00152	4.4401	0.0027523	619.8693389903442	77.066	1.4438	77.383	76.506	77.95	0.31653					106	45	3	0	0	0	0.89803	1	32076	32076		0.45834	0	1	3462500	+		21833	11485	10809	10853	25049	25049					0.11231169001871422
MHPIALPVV	9	Unmodified	_MHPIALPVV_					0	0	0			REV__ENSG00000155016|ENST00000332884|CYP2U1	REV__ENSG00000155016|ENST00000332884|CYP2U1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	488.2884399294853	2	488.786056	975.557558	3.3504	0.0016376	2.5746	0.0012584	5.9249	0.002896	488.787375214867	90.392	0.43321	90.601	90.307	90.74	0.20904					27	13	3	0	0	0	0.11787	1	37824	37824		5.2307	0.47466	1	1633000	+		21834	10486	10810	10854	25050	25050					0.06880196301767683
MHPLHHNP	8	Unmodified	_MHPLHHNP_					0	0	0			REV__ENST00000287263.8_1_8:37720252-37720345:-|nuORF	REV__ENST00000287263.8_1_8:37720252-37720345:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605102419853	3	328.160711	981.460304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2198	1	6.9506	6.4506	7.4506	0.73074								0	0	0	1.0178	1	2580	2580		0.45834	0	1		+		21835	12273	10811	10855	25051	25051					-0.03116772854514238
MHPLILNP	8	Unmodified	_MHPLILNP_					0	0	0		ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant;ENSG00000139083|ENST00000396373|ETV6	ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant	ETV6|p.L376Hfs*12|1|0.06|ENSG00000139083|chr12:11884559-11884560|-/CCATGATGTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	467.7646362185478	2	467.762581	933.510608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.155	1	72.155	71.655	72.655	0								0	0	0	1.0178	1	30046	30046		2.5775	0.27475	1				21836	2863	10812	10856	25052	25052					0.0411933675062528
MHRRHLLLPA	10	Unmodified	_MHRRHLLLPA_					0	0	0		nc|ENSG00000104936|Q09013-2|DMPK;nc|ENSG00000104936|Q09013-5|DMPK;nc|ENSG00000104936|Q09013-11|DMPK;ENSG00000104936|ENST00000291270|DMPK;nc|ENSG00000104936|Q09013-6|DMPK;nc|ENSG00000104936|Q09013-1|DMPK	nc|ENSG00000104936|Q09013-2|DMPK	nc|ENSG00000104936|Q09013-2|DMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2432128787041	3	415.244998	1242.71316	1.1216	0.00046573	-3.3244	-0.0013804	-2.2028	-0.00091471	415.2434754947213	25.558	0.58163	26.817	26.468	27.049	1.2594					50	18	5	0	0	0	0.89803	1	10764	10764		0.77653	0.078866	1	5772500			21837	1491	10813	10857	25053	25053					0.10151659875941732
MHYQSMAR	8	Unmodified	_MHYQSMAR_					0	0	0			REV__nc|ENSG00000165917|Q13702-2|RAPSN	REV__nc|ENSG00000165917|Q13702-2|RAPSN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.2650024294853	3	341.821478	1022.44261	1.6856	0.00057617	3.5557	0.0012154	5.2412	0.0017916	342.15729098465687	60.796	0.19072	61.124	61.011	61.202	0.32809					7	5	2	0	0	0	2.3239	1	25444	25444		0	0	1	215060	+		21838	10803	10814	10858	25054	25054					-0.06771856171678792
MIAAPLSFP	9	Unmodified	_MIAAPLSFP_					0	0	0			REV__ENST00000429403.5_1_3:5164021-5170186:+|nuORF	REV__ENST00000429403.5_1_3:5164021-5170186:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	316.1746093630791	3	316.173735	945.499375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.306	1	19.285	18.785	19.785	0.97922								0	0	0	0.42693	1	7622	7622		1.1933	0	1		+		21839	13016	10815	10859	25055	25055					0.024445146564971765
MIAQPLVNT	9	Unmodified	_MIAQPLVNT_					0	0	0		ENST00000599227.5_2_19:58774240-58774528:+|nuORF	ENST00000599227.5_2_19:58774240-58774528:+|nuORF	ENST00000599227.5_2_19:58774240-58774528:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7719909548759	2	493.770603	985.526652	1.9104	0.00094329	-2.9622	-0.0014627	-1.0519	-0.00051938	493.77049696833205	42.107	0.93881	43.447	43.201	44.14	1.3399					54	29	3	0	0	0	0.3154	1	17692	17692		24.674	0	1	1718200			21840	7532	10816	10860	25056	25056					0.03330998196861401
MIAQPLVNT	9	Unmodified	_MIAQPLVNT_					0	0	0		ENST00000599227.5_2_19:58774240-58774528:+|nuORF	ENST00000599227.5_2_19:58774240-58774528:+|nuORF	ENST00000599227.5_2_19:58774240-58774528:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	493.770603	985.526652	2.4442	0.0012069	0.0093535	4.6185E-06	2.4536	0.0012115	493.770367710743	43.086	0.47787	43.409	43.229	43.707	0.32389	-0.10795	0.0010796	NaN	24.674	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522040			21841	7532	10816	10860							0.03330998196861401
MIDITRSII	9	Unmodified	_MIDITRSII_					0	0	0		nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2;ENSG00000169826|ENST00000374466|CSGALNACT2	nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	nc|ENSG00000169826|Q8N6G5-2|CSGALNACT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3032104372978	2	531.30481	1060.59507	1.7029	0.00090475	-3.2115	-0.0017063	-1.5086	-0.00080152	531.3026663515443	71.733	0.56246	73.074	72.748	73.31	1.3415					43	17	3	0	0	0	0.54523	1	30047	30047		13.508	0.97634	1	9913700			21842	4113	10817	10861	25057	25057					0.0671924277673952
MIELCFKLF	9	Unmodified	_MIELCFKLF_					0	0	0			REV__ENST00000330537.6_16:18558554-18558620:-|nuORF	REV__ENST00000330537.6_16:18558554-18558620:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	571.8334228396416	2	572.300681	1142.58681	2.3984	0.0013726	-3.0932	-0.0017703	-0.69482	-0.00039764	572.2978868026383	61.568	0.25709	63.525	63.337	63.594	1.9571					10	7	2	0	0	0	0.10844	1	25858	25858		7.2892	0	1	660480	+		21843	12443	10818	10862	25058	25058					0.02121972535724126
MIHIVQAKDK	10	Unmodified	_MIHIVQAKDK_					0	0	0		nc|ENSG00000138231|Q9UK59-2|DBR1	nc|ENSG00000138231|Q9UK59-2|DBR1	nc|ENSG00000138231|Q9UK59-2|DBR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5599548220634	3	394.893631	1181.65906	2.6115	0.0010313	-1.3055	-0.00051553	1.306	0.00051575	394.8931002069652	112.91	0.15855	113.08	113.01	113.16	0.16914					6	4	2	0	0	0	0.12532	1	48975	48975		3.8763	0	1	2031800			21844	7881	10819	10863	25059	25059					0.07550022933673972
MIHKSFYEV	9	Unmodified	_MIHKSFYEV_					0	0	0			REV__tr|A0A7D6W335|A0A7D6W335_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08425PE=4SV=1	REV__tr|A0A7D6W335|A0A7D6W335_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08425PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	577.8559448122978	2	577.289159	1152.56377	3.065	0.0017694	2.6316	0.0015192	5.6966	0.0032886	577.2872290564098	64.477	0.33759	65.884	65.71	66.047	1.4071					19	10	3	0	0	0	0.10844	1	27110	27110		7.2892	0	1	1893700	+		21845	15608	10820	10864	25060	25060					-0.0064133025739465666
MIHLFNALI	9	Unmodified	_MIHLFNALI_					0	0	0			REV__ENST00000533581.1_1_1:31658018-31661124:-|nuORF	REV__ENST00000533581.1_1_1:31658018-31661124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3085815310478	2	536.304613	1070.59467	2.1198	0.0011369	1.8797	0.0010081	3.9995	0.002145	536.3065590229194	43.668	0.60991	45.022	44.705	45.315	1.3536					53	19	3	0	0	0	0.46905	1	18317	18317		16.942	3.0362	1	3705900	+		21846	8842	10821	10865	25061	25061					0.06219867847539717
MIIHFVSLF	9	Oxidation (M)	_M(Oxidation (M))IIHFVSLF_		M(1)IIHFVSLF		M(64)IIHFVSLF	0	0	1		ENST00000559500.1_1_15:69553387-69553519:+|nuORF	ENST00000559500.1_1_15:69553387-69553519:+|nuORF	ENST00000559500.1_1_15:69553387-69553519:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8068115115166	2	561.804445	1121.59434	3.0229	0.0016983	3.1881	0.0017911	6.211	0.0034894	561.8048723624354	70.451	0.35374	71.804	71.616	71.97	1.3536					34	10	4	0	0	0	0.061246	1	29577	29577		63.563	25.412	1	7985100			21847	7325	10822	10866	25062	25062		112			0.038404481276756997
MIINDRMPE	9	Unmodified	_MIINDRMPE_					0	0	0		tr|A0A7D6ZP39|A0A7D6ZP39_9CLOTNucleotidesugardehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18750PE=3SV=1	tr|A0A7D6ZP39|A0A7D6ZP39_9CLOTNucleotidesugardehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18750PE=3SV=1	tr|A0A7D6ZP39|A0A7D6ZP39_9CLOTNucleotidesugardehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18750PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	559.2623168826103	2	559.770277	1117.526	0.51361	0.0002875	-1.6397	-0.00091784	-1.1261	-0.00063034	559.7709615708528	23.027	0.43284	24.678	24.467	24.9	1.6511					30	13	4	0	0	0	0.11812	1	9529	9529		4.756	0	1	797840			21848	17120	10823	10867	25063	25063					-0.028061645144816794
MIIWFPDMV	9	Unmodified	_MIIWFPDMV_					0	0	0		ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	576.3292724490166	2	576.285031	1150.55551	1.9235	0.0011085	-1.0406	-0.00059967	0.8829	0.0005088	576.285541336517	69.003	0.31754	70.369	70.154	70.472	1.3657					22	9	3	0	0	0	0.084274	1	28953	28953		30.225	1.1432	1	1420900			21849	4620	10824	10868	25064	25064					-0.013746004983659077
MIIWFPDMV	9	Unmodified	_MIIWFPDMV_					0	0	0		ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	ENSG00000182636|ENST00000649030|NDN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	576.3309203982353	2	576.285031	1150.55551	1.9023	0.0010963	-1.3391	-0.00077168	0.56327	0.0003246	576.2857704957084	68.437	0.2869	70.307	70.169	70.456	1.87					19	8	3	0	0	0	0.084274	1	28733	28733		23.148	0	1	837510			21850	4620	10824	10868	25065	25065					-0.013746004983659077
MIKKIKLMK	9	Unmodified	_MIKKIKLMK_					0	0	0			REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	REV__nc|ENSG00000145700|Q8N7Z5|ANKRD31	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2502319216728	3	378.248469	1131.72358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.76	1	93.087	92.587	93.587	1.3269								0	0	0	0.42693	1	38637	38637		0.26902	0	1		+		21851	10280	10825	10869	25066	25066					0.1629850648610045
MIKSIKKRV	9	Unmodified	_MIKSIKKRV_					0	0	0		tr|A0A7D7AER7|A0A7D7AER7_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03500PE=4SV=1	tr|A0A7D7AER7|A0A7D7AER7_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03500PE=4SV=1	tr|A0A7D7AER7|A0A7D7AER7_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2441894412041	3	368.242483	1101.70562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.55	1	103.72	103.22	104.22	0.16445								0	0	0	0.42693	1	43673	43673		0.26902	0	1				21852	17336	10826	10870	25067	25067					0.158835075556226
MIKSQKLRF	9	Unmodified	_MIKSQKLRF_					0	0	0			REV__ENSG00000151418|ENST00000367382|ATP6V1G3	REV__ENSG00000151418|ENST00000367382|ATP6V1G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8427001833916	2	575.841894	1149.66923	3.3483	0.0019281	1.3546	0.00078004	4.7029	0.0027081	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.75267	1	31222	31222		5.2307	0	1	7218900	+		21853	10400	10827	10871	25068	25068					0.10038630658914371
MIKVIPFRLNW	11	Unmodified	_MIKVIPFRLNW_					0	0	0			REV__nc|ENSG00000167815|P32119-2|PRDX2	REV__nc|ENSG00000167815|P32119-2|PRDX2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	472.2940551638603	3	472.944326	1415.81115	3.5	0.0016553	-3.1186	-0.0014749	0.38141	0.00018039	473.2784272873851	99.641	0.11981	99.714	99.627	99.746	0.072716					5	3	2	0	0	0	0.14606	1	41722	41722		1.3296	0.82369	1	510790	+		21854	13237	10828	10872	25069	25069					0.11987423681239306
MILDAADR	8	Unmodified	_MILDAADR_					0	0	0		tr|A0A553SIG8|A0A553SIG8_NIACIPhospholipaseDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14840PE=4SV=1	tr|A0A553SIG8|A0A553SIG8_NIACIPhospholipaseDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14840PE=4SV=1	tr|A0A553SIG8|A0A553SIG8_NIACIPhospholipaseDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	452.7312194705009	2	452.731477	903.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.223	1	22.223	21.723	22.723	0								0	0	0	1.0178	1	9243	9243		14.838	0	1				21855	16198	10829	10873	25070	25070					-0.007184343883750444
MILDYELMDMK	11	Unmodified	_MILDYELMDMK_					0	0	0		tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.8879882693291	3	467.886937	1400.63898	1.257	0.00058814	-0.013537	-6.3336E-06	1.2435	0.0005818	467.8872795262613	21.844	0.30072	23.021	22.839	23.14	1.177					20	9	3	0	0	0	0.95983	1	9129	9129		2.8433	0	1	1299300			21856	16722	10830	10874	25071	25071					-0.04531276903503567
MILHVKKLW	9	Unmodified	_MILHVKKLW_					0	0	0		ENST00000517513.5_1_4:185553430-185553481:-|nuORF	ENST00000517513.5_1_4:185553430-185553481:-|nuORF	ENST00000517513.5_1_4:185553430-185553481:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3589965701103	2	584.357179	1166.69981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.183	1	73.508	73.008	74.008	0.32494								0	0	0	0.42693	1	30613	30613		2.3027	0	1				21857	7057	10831	10875	25072	25072					0.12312409043966
MILPLPLRKP	10	Unmodified	_MILPLPLRKP_					0	0	0		ENST00000496704.1_1_2:130897130-130898075:-|nuORF;ENSG00000163040|ENST00000409856|CCDC74A;ENSG00000152076|ENST00000409943|CCDC74B;nc|ENSG00000163040|Q96AQ1|CCDC74A;nc|ENSG00000152076|Q96LY2|CCDC74B	ENST00000496704.1_1_2:130897130-130898075:-|nuORF	ENST00000496704.1_1_2:130897130-130898075:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	393.5880004763603	3	393.2545	1176.74167	0.67166	0.00026414	-1.9003	-0.00074731	-1.2287	-0.00048318	393.58756522377547	31.103	0.70559	32.928	32.398	33.103	1.8246					29	23	2	0	0	0	0.89803	1	13052	13052		0.69767	0.42865	1	823330			21858	3310	10832	10876	25073	25073					0.16036964732484194
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.7557861208916	2	528.755149	1055.49575	2.1707	0.0011478	-1.5618	-0.00082583	0.60886	0.00032194	528.7543247572921	60.051	0.26852	60.051	59.856	60.124	0					13	8	2	0	0	0	0.76456	1	25035	25035		4.756	0.81161	1	1047600	+		21859	15329	10833	10877	25074	25074					-0.029781999080114474
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7539550662041	2	528.755149	1055.49575	1.0131	0.00053568	-0.49225	-0.00026028	0.52084	0.00027539	528.7547071139855	58.068	0.33874	60.037	59.842	60.181	1.969					26	10	3	0	0	0	0.66839	1	24301	24301		8.5933	0.68312	1	8133300	+		21860	15329	10833	10877	25075	25075					-0.029781999080114474
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	528.755149	1055.49575	2.1707	0.0011478	-1.5618	-0.00082583	0.60886	0.00032194	528.7543247572921	60.051	0.26852	60.051	59.856	60.124	0	0.084429	-0.0010687	NaN	4.756	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1047600	+		21861	15329	10833	10877							-0.029781999080114474
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	528.755149	1055.49575	2.5054	0.0013247	0.098491	5.2078E-05	2.6039	0.0013768	528.7547790210236	59.559	0.28331	59.885	59.743	60.027	0.32553	-0.081867	0.00068716	NaN	4.756	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1966600	+		21862	15329	10833	10877							-0.029781999080114474
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	528.755149	1055.49575	1.0771	0.00056954	0.77596	0.00041029	1.8531	0.00097983	528.7556854370052	58.475	0.34644	59.893	59.752	60.099	1.4181	-0.073408	0.0014036	NaN	4.756	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3886300	+		21863	15329	10833	10877							-0.029781999080114474
MINTYSNTL	9	Unmodified	_MINTYSNTL_					0	0	0			REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	REV__tr|A0A7D6VN75|A0A7D6VN75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17770PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	528.755149	1055.49575	1.0131	0.00053568	-0.49225	-0.00026028	0.52084	0.00027539	528.7547071139855	58.068	0.33874	60.037	59.842	60.181	1.969	0.070847	6.2445E-05	NaN	4.756	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8133300	+		21864	15329	10833	10877							-0.029781999080114474
MIPIQVPVE	9	Unmodified	_MIPIQVPVE_					0	0	0			REV__nc|ENSG00000126733|Q96NX9-3|DACH2	REV__nc|ENSG00000126733|Q96NX9-3|DACH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2878906130791	2	513.288628	1024.5627	2.3526	0.0012075	-2.372	-0.0012175	-0.019428	-9.972E-06	513.2875698433046	62.679	0.46506	62.679	62.461	62.926	0					25	14	2	0	0	0	0.49082	1	26174	26174		15.847	3.3156	1	916360	+		21865	9699	10834	10878	25076	25076					0.05140455373725672
MIPIQVPVE	9	Unmodified	_MIPIQVPVE_					0	0	0			REV__nc|ENSG00000126733|Q96NX9-3|DACH2	REV__nc|ENSG00000126733|Q96NX9-3|DACH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2889892458916	2	513.288628	1024.5627	2.0542	0.0010544	-2.3546	-0.0012086	-0.30043	-0.0001542	513.2877459812114	62.208	0.4665	62.538	62.321	62.788	0.32974					24	14	2	0	0	0	0.27148	1	26064	26064		26.884	5.137	1	857680	+		21866	9699	10834	10878	25077	25077					0.05140455373725672
MIPIQVPVE	9	Unmodified	_MIPIQVPVE_					0	0	0			REV__nc|ENSG00000126733|Q96NX9-3|DACH2	REV__nc|ENSG00000126733|Q96NX9-3|DACH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	512.8147460818291	2	513.288628	1024.5627	3.62	0.0018581	-3.4401	-0.0017658	0.17988	9.233E-05	513.286902507879	60.566	0.43048	62.531	62.42	62.85	1.9653					25	13	2	0	0	0	0.10591	1	25384	25384		7.9102	0	1	1622500	+		21867	9699	10834	10878	25078	25078					0.05140455373725672
MIPLDKLSL	9	Unmodified	_MIPLDKLSL_					0	0	0			REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3049194216728	2	515.304278	1028.594	3.3698	0.0017365	1.2675	0.00065315	4.6373	0.0023896	515.3027648386586	60.06	0.22122	62.026	61.883	62.105	1.9653					16	6	3	0	0	0	0.11643	1	25208	25208		43.858	3.901	1	1815000	+		21868	15595	10835	10879	25079	25079					0.0808502840784513
MIPLDKLSL	9	Unmodified	_MIPLDKLSL_					0	0	0			REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.304278	1028.594	3.3978	0.0017509	2.616	0.0013481	6.0138	0.003099	515.3036996980104	60.588	0.18757	62.008	61.871	62.059	1.4196	-0.0087667	0.00075549	NaN	43.858	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1476700	+		21869	15595	10835	10879							0.0808502840784513
MIPLDKLSL	9	Unmodified	_MIPLDKLSL_					0	0	0			REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	REV__tr|A0A7D6W1S5|A0A7D6W1S5_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03810PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	515.304278	1028.594	3.3698	0.0017365	1.2675	0.00065315	4.6373	0.0023896	515.3027648386586	60.06	0.22122	62.026	61.883	62.105	1.9653	0.0087667	-0.00063432	NaN	43.858	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1815000	+		21870	15595	10835	10879							0.0808502840784513
MIQDHPGSR	9	Unmodified	_MIQDHPGSR_					0	0	0			REV__ENST00000462375.5_1_9:134385592-134386855:+|nuORF	REV__ENST00000462375.5_1_9:134385592-134386855:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7532226443291	2	520.750733	1039.48691	2.6988	0.0014054	1.5557	0.00081015	4.2546	0.0022156	520.7512520834307	72.367	0.40121	74.177	73.952	74.353	1.8101					27	12	3	0	0	0	0.46566	1	30346	30346		17.113	0.1706	1	2263400	+		21871	9794	10836	10880	25080	25080					-0.03125128753845274
MIRQGGNHL	9	Unmodified	_MIRQGGNHL_					0	0	0		nc|ENSG00000162105|Q9UPX8-2|SHANK2;nc|ENSG00000162105|Q9UPX8-4|SHANK2;SHANK2|p.K849Rfs*34|1|0.58|ENSG00000162105|chr11:70486610-70486611|-/CGGACGGCGAGCTGTCTGGCTTCATCTCCACCTC|frameshift_variant;nc|ENSG00000162105|Q9UPX8-1|SHANK2;ENSG00000162105|ENST00000601538|SHANK2	nc|ENSG00000162105|Q9UPX8-2|SHANK2	nc|ENSG00000162105|Q9UPX8-2|SHANK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2701904177666	2	513.269093	1024.52363	3.5907	0.001843	-1.3371	-0.00068627	2.2536	0.0011567	513.2685527589044	81.315	0.71141	82.548	82.255	82.966	1.2332					45	22	3	0	0	0	0.54523	1	34106	34106		13.508	2.3934	1	2437500			21872	3606	10837	10881	25081	25081					0.012351678627283036
MISFQPFLR	9	Unmodified	_MISFQPFLR_					0	0	0			REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3099243044853	2	569.807519	1137.60049	1.2809	0.00072987	-0.76968	-0.00043857	0.51121	0.00029129	570.3079447887894	79.945	0.25163	81.662	81.537	81.789	1.7167					12	7	2	0	0	0	0.42305	1	33549	33549		19.257	2.3147	1	426860	+		21873	14296	10838	10882	25082	25082					0.03718966359178921
MISFQPFLR	9	Unmodified	_MISFQPFLR_					0	0	0			REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	569.807519	1137.60049	2.6378	0.001503	-2.35	-0.0013391	0.28776	0.00016397	569.8065676555636	80.504	0.24207	81.755	81.608	81.85	1.2512	0.046711	-0.00025949	NaN	19.257	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587690	+		21874	14296	10838	10882							0.03718966359178921
MISFQPFLR	9	Unmodified	_MISFQPFLR_					0	0	0			REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|268|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	569.807519	1137.60049	1.2809	0.00072987	-0.76968	-0.00043857	0.51121	0.00029129	570.3079447887894	79.945	0.25163	81.662	81.537	81.789	1.7167	-0.046711	0.0015415	NaN	19.257	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426860	+		21875	14296	10838	10882							0.03718966359178921
MISHQCVFAS	10	Unmodified	_MISHQCVFAS_					0	0	0			REV__ENSG00000131746|ENST00000254051|TNS4	REV__ENSG00000131746|ENST00000254051|TNS4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.2589599490166	2	561.757169	1121.49979	2.9762	0.0016719	0.40319	0.00022649	3.3794	0.0018984	561.7568460538473	82.874	0.18467	84.086	83.951	84.136	1.2125					8	5	2	0	0	0	0.12493	1	34772	34772		10.824	4.6181	1	1089000	+		21876	9825	10839	10883	25083	25083					-0.056104336859561954
MISMYRLPK	9	Unmodified	_MISMYRLPK_					0	0	0			REV__ENSG00000184954|ENST00000327335|OR6C70	REV__ENSG00000184954|ENST00000327335|OR6C70	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.8098022341728	2	569.809205	1137.60386	0.895	0.00050998	-0.70979	-0.00040444	0.18521	0.00010553	569.808678828943	27.366	0.2122	27.366	27.259	27.471	0					9	6	2	0	0	0	0.83753	1	11455	11455		1.8442	0	1	522740	+		21877	11436	10840	10884	25084	25084					0.040558931415489496
MITEDPAALN	10	Unmodified	_MITEDPAALN_					0	0	0		BBX|p.I438T|1|0.31|ENSG00000114439|chr3:107773034-107773034|T/C|missense_variant	BBX|p.I438T|1|0.31|ENSG00000114439|chr3:107773034-107773034|T/C|missense_variant	BBX|p.I438T|1|0.31|ENSG00000114439|chr3:107773034-107773034|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7628051638603	2	537.760432	1073.50631	2.8581	0.001537	0.19176	0.00010312	3.0499	0.0016401	537.7606037798453	79.659	0.43198	80.91	80.739	81.171	1.2512					39	13	4	0	0	0	0.75645	1	33505	33505		15.847	2.3393	1	8476400			21878	102	10841	10885	25085	25085					-0.027502172536060243
MITLDDRDL	9	Unmodified	_MITLDDRDL_					0	0	0			REV__ENSG00000111713|ENST00000261195|GYS2	REV__ENSG00000111713|ENST00000261195|GYS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2758056521416	2	546.273706	1090.53286	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.779	1	81.03	80.53	81.53	1.2512								0	0	0	0.35192	1	33486	33486		13.508	0.97634	1		+		21879	9338	10842	10886	25086	25086					-0.008785283622728457
MITNHHKR	8	Unmodified	_MITNHHKR_					0	0	0		ENST00000526589.5_1_1:236715018-236715174:+|nuORF	ENST00000526589.5_1_1:236715018-236715174:+|nuORF	ENST00000526589.5_1_1:236715018-236715174:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.1855346560478	3	346.187149	1035.53962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.214	1	50.214	49.714	50.714	0								0	0	0	1.0178	1	20950	20950		1.6526	0	1				21880	7126	10843	10887	25087	25087					0.02326874099617271
MITVKVVKGYK	11	Unmodified	_MITVKVVKGYK_					0	0	0			REV__ENSG00000139168|ENST00000266529|ZCRB1	REV__ENSG00000139168|ENST00000266529|ZCRB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1960632205009	4	317.196705	1264.75771	-2.4472	-0.00077625	-0.20242	-6.4205E-05	-2.6496	-0.00084045	317.19654149507863	36.285	0.88987	36.285	36.142	37.032	0					123	64	3	0	0	0	1.0224	1	15182	15182		2.4348	0.69251	1	37022000	+		21881	10096	10844	10888	25088	25088					0.13592626178729006
MITVKVVKGYK	11	Unmodified	_MITVKVVKGYK_					0	0	0			REV__ENSG00000139168|ENST00000266529|ZCRB1	REV__ENSG00000139168|ENST00000266529|ZCRB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1961547732353	4	317.196705	1264.75771	-2.4154	-0.00076614	0.27026	8.5725E-05	-2.1451	-0.00068042	317.1967445624548	37.21	0.65149	37.21	37.009	37.66	0					99	30	4	0	0	0	1.0224	1	15661	15661		2.4348	0.15201	1	32657000	+		21882	10096	10844	10888	25089	25089					0.13592626178729006
MITVKVVKGYK	11	Unmodified	_MITVKVVKGYK_					0	0	0			REV__ENSG00000139168|ENST00000266529|ZCRB1	REV__ENSG00000139168|ENST00000266529|ZCRB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1951476931572	4	317.196705	1264.75771	0.13675	4.3377E-05	-3.0093	-0.00095453	-2.8725	-0.00091116	317.19563218135227	34.331	0.42652	36.153	35.864	36.291	1.8227					89	43	3	0	0	0	1.0254	1	14419	14419		2.2527	0.32522	1	38415000	+		21883	10096	10844	10888	25090	25090					0.13592626178729006
MIVHGPIK	8	Unmodified	_MIVHGPIK_					0	0	0		tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	447.7652465701103	2	447.765123	893.515694	1.5958	0.00071455	-0.3635	-0.00016276	1.2323	0.00055179	447.76477768325645	73.498	0.5818	73.498	73.153	73.734	0					44	18	3	0	0	0	0.89176	1	30557	30557		0.79363	0	1	12503000			21884	16816	10845	10889	25091	25091					0.06467640613243475
MIVHGPIK	8	Unmodified	_MIVHGPIK_					0	0	0		tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	tr|A0A7D6VR14|A0A7D6VR14_9CLOTU32familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	447.7660705447197	2	447.765123	893.515694	2.8047	0.0012558	-0.086711	-3.8826E-05	2.718	0.001217	447.7650438141742	71.969	0.80282	73.793	73.253	74.056	1.8239					60	25	4	0	0	0	0.89176	1	30200	30200		0.79363	0	1	12041000			21885	16816	10845	10889	25092	25092					0.06467640613243475
MIVMTPSNTF	10	Oxidation (M)	_M(Oxidation (M))IVMTPSNTF_		M(1)IVMTPSNTF		M(36)IVM(-36)TPSNTF	0	0	1			REV__ENSG00000158571|ENST00000375006|PFKFB1	REV__ENSG00000158571|ENST00000375006|PFKFB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.7750121951103	2	578.772485	1155.53042	2.064	0.0011946	2.8208	0.0016326	4.8848	0.0028272	578.7740023772819	41.603	0.56978	42.928	42.587	43.157	1.3254					45	17	3	0	0	0	0.092962	2	17409	17409;17461		65.235	6.5562	2	2803800	+		21886	10558	10846	10890	25093;25094	25093		119			-0.041127000915821554
MIYLIKPL	8	Unmodified	_MIYLIKPL_					0	0	0			REV__tr|A0A553SN18|A0A553SN18_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_23440PE=4SV=1	REV__tr|A0A553SN18|A0A553SN18_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_23440PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	496.2227661013603	2	495.806457	989.598361	3.0503	0.0015124	0.032628	1.6177E-05	3.083	0.0015286	495.8060785653899	72.533	0.58456	73.863	73.672	74.257	1.3297					36	18	3	0	0	0	2.3239	1	30583	30583		6.3541	0	1	1283700	+		21887	15041	10847	10891	25095	25095					0.10314537621388808
MIYLKEHLA	9	Unmodified	_MIYLKEHLA_					0	0	0			REV__ENSG00000146233|ENST00000275016|CYP39A1	REV__ENSG00000146233|ENST00000275016|CYP39A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3089477419853	2	559.307352	1116.60015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.284	1	45.646	45.146	46.146	1.362								0	0	0	0.42693	1	18565	18565		2.3027	0.24298	1		+		21888	10297	10848	10892	25096	25096					0.046515466393657334
MKAAPVIKRKI	11	Unmodified	_MKAAPVIKRKI_					0	0	0		nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	nc|ENSG00000155657|Q8WZ42-11|TTN	nc|ENSG00000155657|Q8WZ42-11|TTN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	419.3162719607353	3	418.940804	1253.80058	1.7459	0.00073142	0.56391	0.00023624	2.3098	0.00096767	418.9398785090683	49.089	0.21298	51.066	50.917	51.13	1.9772					10	6	2	0	0	0	0.14606	1	20576	20576		0.40827	0	1	253120			21889	7900	10849	10893	25097	25097					0.1838344102679912
MKAKKVKT	8	Unmodified	_MKAKKVKT_					0	0	0		tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.3026306033134	2	467.29933	932.584108	3.1212	0.0014585	2.6925	0.0012582	5.8137	0.0027168	467.3005042831427	74.842	0.71452	76.624	76.389	77.103	1.7817					69	22	5	0	0	0	0.89178	1	31345	31345		0.69038	0	1	81206000			21890	16241	10850	10894	25098	25098					0.11511885193101534
MKAKKVKT	8	Unmodified	_MKAKKVKT_					0	0	0		tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	tr|A0A553SJD2|A0A553SJD2_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_16570PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	467.29933	932.584108	2.966	0.001386	3.096	0.0014468	6.062	0.0028328	467.3007098739809	75.178	0.80407	76.485	76.214	77.018	1.3063	-0.069645	0.00016555	NaN	0.69038	79	25	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76697000			21891	16241	10850	10894							0.11511885193101534
MKEKLIHK	8	Unmodified	_MKEKLIHK_					0	0	0		SNUPN|p.T325I|1|0.04|ENSG00000169371|chr15:75598467-75598467|G/A|missense_variant	SNUPN|p.T325I|1|0.04|ENSG00000169371|chr15:75598467-75598467|G/A|missense_variant	SNUPN|p.T325I|1|0.04|ENSG00000169371|chr15:75598467-75598467|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8747436404228	3	342.8758	1025.60557	-0.068838	-2.3603E-05	-1.36	-0.00046631	-1.4288	-0.00048991	342.87526041618617	38.004	1.0264	39.288	38.704	39.731	1.284					93	39	4	0	0	0	0.89156	1	15825	15825		1.4819	0	1	31208000			21892	15966	10851	10895	25099	25099					0.09379270221802471
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.5663940310478	3	388.566744	1162.6784	0.92315	0.00035871	-2.5199	-0.00097917	-1.5968	-0.00062046	388.5655914657769	50.647	1.2762	52.04	51.615	52.891	1.3938					96	41	3	0	0	0	0.6796	4	21077	21077;21122;21176;21229		12.856	5.3789	1	4293700	+		21893	11617	10852	10896	25100;25101;25102;25103	25100					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3489257693291	2	582.346477	1162.6784	2.2468	0.0013084	1.4226	0.00082846	3.6694	0.0021369	582.3477851130657	50.458	0.88316	51.852	51.615	52.498	1.3938					43	28	3	0	0	0	0.18015	1	21095	21095		51.415	1.8609	1	9960100	+		21894	11617	10852	10896	25104	25104					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3470336794853	2	582.346477	1162.6784	1.1825	0.00068863	-2.2407	-0.0013049	-1.0582	-0.00061623	582.3452243733493	50.789	1.1679	52.183	51.924	53.092	1.3938					70	38	2	0	0	0	0.18015	4	21211	21211;21261;21463;21519		51.415	5.3071	1	21502000	+		21895	11617	10852	10896	25105;25106;25107;25108	25105					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	582.3470336794853	2	582.346477	1162.6784	2.2468	0.0013084	1.4226	0.00082846	3.6694	0.0021369	582.3477851130657	50.458	0.88316	51.852	51.615	52.498	1.3938					43	28	3	0	0	0	0.11397	1	21211	21211		51.415	1.8609	1	9960100	+		21896	11617	10852	10896	25109	25109					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.5659973025322	3	388.566744	1162.6784	1.2336	0.00047934	-2.8268	-0.0010984	-1.5932	-0.00061906	388.56553858880125	50.158	1.2514	52.135	51.601	52.853	1.9772					86	40	3	0	0	0	0.6796	3	20852	20852;20905;20955		12.856	4.1042	1	4056200	+		21897	11617	10852	10896	25110;25111;25112	25110					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3437377810478	2	582.346477	1162.6784	1.3351	0.00077751	-0.70677	-0.00041158	0.62837	0.00036593	582.3458706822965	50.24	1.3676	52.217	51.601	52.969	1.9772					116	44	4	0	0	0	0.2264	5	21203	20964;21015;21203;21253;21310		45.74	10.808	1	13315000	+		21898	11617	10852	10896	25113;25114;25115;25116;25117	25115					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3436767458916	2	582.346477	1162.6784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.527	1	53.502	53.002	54.002	1.9753								0	0	0	0.62071	1	21593	21593		20.415	2.2682	1		+		21899	11617	10852	10896	25118	25118					0.10356979224593488
MKFIGVLDKL	10	Unmodified	_MKFIGVLDKL_					0	0	0			REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	REV__nc|ENSG00000196151|Q8N9V3-2|WDSUB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	582.346477	1162.6784	1.3351	0.00077751	-0.70677	-0.00041158	0.62837	0.00036593	582.3458706822965	50.24	1.3676	52.217	51.601	52.969	1.9772	0.017224	0.0008687	NaN	51.415	116	44	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13315000	+		21900	11617	10852	10896							0.10356979224593488
MKFLKITI	8	Acetyl (Protein N-term),Oxidation (M)	_(Acetyl (Protein N-term))M(Oxidation (M))KFLKITI_		M(1)KFLKITI		M(48)KFLKITI	1	0	1		ENST00000356847.8_1_3:37368010-37368094:+|nuORF	ENST00000356847.8_1_3:37368010-37368094:+|nuORF	ENST00000356847.8_1_3:37368010-37368094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3155395388603	2	526.314646	1050.61474	1.8468	0.000972	-0.37678	-0.00019831	1.47	0.00077369	526.3146383135079	66.755	0.99336	66.755	66.448	67.441	0					79	31	4	0	0	0	0.49046	1	27791	27791		48.346	6.5062	1	7609000			21901	5994	10853	10897	25119	25119		101			0.09145618787488274
MKFLLLGR	8	Unmodified	_MKFLLLGR_					0	0	0			REV__ENST00000381765.7_1_2:10443830-10444034:+|nuORF	REV__ENST00000381765.7_1_2:10443830-10444034:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3056213259697	2	489.301873	976.589193	3.4624	0.0016942	3.1565	0.0015445	6.6189	0.0032387	489.3030142906524	107.69	0.1652	107.74	107.64	107.8	0.052452					20	8	3	0	0	0	0.89051	1	46120	46120		2.3027	0	1	37668000	+		21902	12778	10854	10898	25120	25120					0.09996189055743798
MKFLLLGR	8	Unmodified	_MKFLLLGR_					0	0	0			REV__ENST00000381765.7_1_2:10443830-10444034:+|nuORF	REV__ENST00000381765.7_1_2:10443830-10444034:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	489.301873	976.589193	3.4624	0.0016942	3.1565	0.0015445	6.6189	0.0032387	489.3030142906524	107.69	0.1652	107.74	107.64	107.8	0.052452	0.024847	-0.0012033	NaN	2.3027	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37668000	+		21903	12778	10854	10898							0.09996189055743798
MKHLSRPI	8	Unmodified	_MKHLSRPI_					0	0	0			REV__ENST00000419462.1_1_8:102381113-102381542:+|nuORF	REV__ENST00000419462.1_1_8:102381113-102381542:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2868835330009	2	491.286754	980.558955	3.4258	0.001683	-0.72699	-0.00035716	2.6988	0.0013259	491.28639296414207	97.862	0.15485	97.953	97.874	98.029	0.090881					10	4	3	0	0	0	0.89051	1	40937	40937		2.3027	0	1	12985000	+		21904	12966	10855	10899	25121	25121					0.06789830390528095
MKIIPFNRL	9	Oxidation (M)	_M(Oxidation (M))KIIPFNRL_		M(1)KIIPFNRL		M(48)KIIPFNRL	0	0	1		nc|ENSG00000171557|P02679-2|FGG;ENSG00000171557|ENST00000336098|FGG	nc|ENSG00000171557|P02679-2|FGG	nc|ENSG00000171557|P02679-2|FGG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3359863162041	2	574.336444	1146.65834	1.2432	0.00071401	-1.361	-0.00078167	-0.1178	-6.7659E-05	574.3353322011027	80.027	0.24931	81.743	81.568	81.817	1.7167					18	7	3	0	0	0	0.10294	1	33556	33556		48.346	8.3885	1	984260			21905	4196	10856	10900	25122	25122		71			0.09087228284624871
MKIIPFNRL	9	Oxidation (M)	_M(Oxidation (M))KIIPFNRL_					0	0	1		nc|ENSG00000171557|P02679-2|FGG;ENSG00000171557|ENST00000336098|FGG	nc|ENSG00000171557|P02679-2|FGG	nc|ENSG00000171557|P02679-2|FGG	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	574.336444	1146.65834	1.924	0.001105	-2.9124	-0.0016727	-0.9884	-0.00056768	574.334613162863	82.024	0.21133	82.024	81.915	82.127	0	0.20747	-0.00049287	NaN	48.346	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	633960			21906	4196	10856	10900				71			0.09087228284624871
MKIIPFNRL	9	Oxidation (M)	_M(Oxidation (M))KIIPFNRL_					0	0	1		nc|ENSG00000171557|P02679-2|FGG;ENSG00000171557|ENST00000336098|FGG	nc|ENSG00000171557|P02679-2|FGG	nc|ENSG00000171557|P02679-2|FGG	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	574.336444	1146.65834	1.9513	0.0011207	-6.2246	-0.003575	-4.2733	-0.0024543	574.3335679011275	81.473	0.1489	81.754	81.663	81.812	0.2802	-0.062859	-0.0042975	NaN	48.346	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233790			21907	4196	10856	10900				71			0.09087228284624871
MKIKHILLLG	10	Unmodified	_MKIKHILLLG_					0	0	0		ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2544738650322	3	389.2545	1164.74167	0.41105	0.00016	-1.2804	-0.00049842	-0.86939	-0.00033841	389.2542152853662	28.011	0.82339	29.29	29.029	29.852	1.2789					100	26	5	0	0	0	0.89803	1	11779	11779		0.69767	0	1	138770000			21908	6305	10857	10901	25123	25123					0.16588964732477507
MKIKHILLLG	10	Unmodified	_MKIKHILLLG_					0	0	0		ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3774902224541	2	583.378112	1164.74167	0.632	0.0003687	-0.81954	-0.0004781	-0.18753	-0.0001094	583.3775741063457	27.124	0.71151	28.871	28.524	29.235	1.747					49	22	3	0	0	0	0.89803	1	11245	11245		0.40072	0	1	4237900			21909	6305	10857	10901	25124	25124					0.16588964732477507
MKIKHILLLG	10	Unmodified	_MKIKHILLLG_					0	0	0		ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	ENST00000397033.6_1_2:182386922-182386958:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2546569705009	3	389.2545	1164.74167	0.50243	0.00019557	-1.1578	-0.00045067	-0.65534	-0.00025509	389.2544596413454	27.379	0.9561	29.126	28.865	29.821	1.747					116	30	6	0	0	0	0.8974	2	11408	11408;11525		1.7423	0.67081	1	144500000			21910	6305	10857	10901	25125;25126	25125					0.16588964732477507
MKIVKKKF	8	Unmodified	_MKIVKKKF_					0	0	0			REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	REV__ATRX|p.Y1667Sfs*13|1|0.04|ENSG00000085224|chrX:77633341-77633341|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.2247192263603	3	341.224541	1020.65179	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.358	1	43.682	43.182	44.182	0.32389								0	0	0	1.0178	1	18205	18205		0.40072	0.40072	1		+		21911	8154	10858	10902	25127	25127					0.14229335123911824
MKIVLHKGL	9	Unmodified	_MKIVLHKGL_					0	0	0		ENST00000418970.6_1_2:7055976-7056084:-|nuORF	ENST00000418970.6_1_2:7055976-7056084:-|nuORF	ENST00000418970.6_1_2:7055976-7056084:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	347.2001525759697	3	346.887929	1037.64196	2.8476	0.0009878	0.74664	0.000259	3.5943	0.0012468	347.22398168531447	60.566	0.7135	62.531	62.167	62.881	1.9653					31	22	2	0	0	0	0.11837	1	25275	25275		4.897	3.5675	1	742050			21912	6431	10859	10903	25128	25128					0.12464147118521396
MKIVLHKGL	9	Unmodified	_MKIVLHKGL_					0	0	0		ENST00000418970.6_1_2:7055976-7056084:-|nuORF	ENST00000418970.6_1_2:7055976-7056084:-|nuORF	ENST00000418970.6_1_2:7055976-7056084:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	346.887929	1037.64196	1.8532	0.00064287	2.6747	0.00092782	4.5279	0.0015707	347.224250274746	61.141	0.27621	62.561	62.409	62.685	1.4196	0.020347	-0.0003505	NaN	4.897	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	703780			21913	6431	10859	10903							0.12464147118521396
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1960937380791	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.138	1	19.138	18.638	19.638	0								0	0	0	1.0178	1	7952	7952		0	0	1				21914	17308	10860	10904	25129	25129					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1964904665947	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.912	1	31.912	31.412	32.412	0								0	0	0	1.0178	1	13369	13369		0	0	1				21915	17308	10860	10904	25130	25130					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1963989138603	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.055	1	32.055	31.555	32.555	0								0	0	0	1.0178	1	13428	13428		0	0	1				21916	17308	10860	10904	25131	25131					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1962768435478	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.165	1	32.165	31.665	32.665	0								0	0	0	1.0178	1	13475	13475		0	0	1				21917	17308	10860	10904	25132	25132					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1960937380791	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.288	1	32.288	31.788	32.788	0								0	0	0	1.0178	1	13527	13527		0	0	1				21918	17308	10860	10904	25133	25133					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1963683962822	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.67	1	32.67	32.17	33.17	0								0	0	0	1.0178	1	13688	13688		0	0	1				21919	17308	10860	10904	25134	25134					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1963989138603	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.551	1	33.551	33.051	34.051	0								0	0	0	1.0178	1	14059	14059		0	0	1				21920	17308	10860	10904	25135	25135					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1956359744072	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.793	1	35.793	35.293	36.293	0								0	0	0	1.0178	1	15006	15006		0	0	1				21921	17308	10860	10904	25136	25136					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1957580447197	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.889	1	35.889	35.389	36.389	0								0	0	0	1.0178	1	15047	15047		0	0	1				21922	17308	10860	10904	25137	25137					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1958495974541	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.213	1	39.213	38.713	39.713	0								0	0	0	1.0178	1	16434	16434		0	0	1				21923	17308	10860	10904	25138	25138					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1971313357353	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.642	1	39.642	39.142	40.142	0								0	0	0	1.0178	1	16614	16614		0	0	1				21924	17308	10860	10904	25139	25139					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1964599490166	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.308	1	43.308	42.808	43.808	0								0	0	0	1.0178	1	18131	18131		0	0	1				21925	17308	10860	10904	25140	25140					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	302.1961852908134	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.618	1	43.618	43.118	44.118	0								0	0	0	1.0178	1	18258	18258		0	0	1				21926	17308	10860	10904	25141	25141					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1967956423759	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.27	1	31.561	31.061	32.061	0.29086								0	0	0	1.0178	1	13125	13125		0	0	1				21927	17308	10860	10904	25142	25142					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1966430544853	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.536	1	31.827	31.327	32.327	0.29086								0	0	0	1.0178	1	13237	13237		0	0	1				21928	17308	10860	10904	25143	25143					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1969177126884	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.633	1	31.924	31.424	32.424	0.29086								0	0	0	1.0178	1	13278	13278		0	0	1				21929	17308	10860	10904	25144	25144					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1967040896416	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.731	1	32.022	31.522	32.522	0.29086								0	0	0	1.0178	1	13319	13319		0	0	1				21930	17308	10860	10904	25145	25145					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1963683962822	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.67899	1	1.3464	0.84637	1.8464	0.66738								0	0	0	1.0178	1	278	278		0	0	1				21931	17308	10860	10904	25146	25146					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1959716677666	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2855	1	7.9127	7.4127	8.4127	0.62713								0	0	0	1.0178	1	3014	3014		0	0	1				21932	17308	10860	10904	25147	25147					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1959106326103	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3936	1	8.0207	7.5207	8.5207	0.62713								0	0	0	1.0178	1	3059	3059		0	0	1				21933	17308	10860	10904	25148	25148					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1959106326103	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.486	1	8.1132	7.6132	8.6132	0.62713								0	0	0	1.0178	1	3098	3098		0	0	1				21934	17308	10860	10904	25149	25149					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1958495974541	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3389	1	8.9754	8.4754	9.4754	0.63651								0	0	0	1.0178	1	3457	3457		0	0	1				21935	17308	10860	10904	25150	25150					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1960632205009	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5524	1	9.1889	8.6889	9.6889	0.63651								0	0	0	1.0178	1	3548	3548		0	0	1				21936	17308	10860	10904	25151	25151					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1961242556572	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.951	1	14.678	14.178	15.178	0.72639								0	0	0	1.0178	1	5795	5795		0	0	1				21937	17308	10860	10904	25152	25152					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1963989138603	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.957	1	31.239	30.739	31.739	1.2825								0	0	0	1.0178	1	12570	12570		0	0	1				21938	17308	10860	10904	25153	25153					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1969482302666	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.259	1	31.541	31.041	32.041	1.2825								0	0	0	1.0178	1	12698	12698		0	0	1				21939	17308	10860	10904	25154	25154					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1966125369072	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.366	1	31.648	31.148	32.148	1.2825								0	0	0	1.0178	1	12743	12743		0	0	1				21940	17308	10860	10904	25155	25155					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1962768435478	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.309	1	32.591	32.091	33.091	1.2813								0	0	0	1.0178	1	13135	13135		0	0	1				21941	17308	10860	10904	25156	25156					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1961242556572	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.439	1	32.72	32.22	33.22	1.2813								0	0	0	1.0178	1	13188	13188		0	0	1				21942	17308	10860	10904	25157	25157					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1961547732353	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.56	1	32.841	32.341	33.341	1.2813								0	0	0	1.0178	1	13238	13238		0	0	1				21943	17308	10860	10904	25158	25158					0.11315018395919196
MKKGKKGK	8	Unmodified	_MKKGKKGK_					0	0	0		tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	tr|A0A7D7A6G8|A0A7D7A6G8_9CLOTSignalrecognitionparticleproteinOS=ClostridiumintestinaleOX=36845GN=ffhPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1967651247978	3	302.196874	903.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.32	109.82	110.82	0.16133								0	0	0	1.0178	1	47862	47862		0	0	1				21944	17308	10860	10904	25159	25159					0.11315018395919196
MKKIKTAFV	9	Unmodified	_MKKIKTAFV_					0	0	0			REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3294555544853	2	533.328088	1064.64162	3.4899	0.0018613	0.44237	0.00023593	3.9323	0.0020972	533.3276254664079	106.01	0.12884	106.18	106.11	106.24	0.16174					15	6	3	0	0	0	0.7849	1	45247	45247		3.9444	1.8846	1	34903000	+		21945	8615	10861	10905	25160	25160					0.1118872739868948
MKKIKTAFV	9	Unmodified	_MKKIKTAFV_					0	0	0			REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	533.328088	1064.64162	2.847	0.0015184	3.6475	0.0019453	6.4945	0.0034637	533.833528076332	106.08	0.06279	106.13	106.08	106.15	0.05455	-0.037921	0.0027375	NaN	3.9444	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7863200	+		21946	8615	10861	10905							0.1118872739868948
MKKIKTAFV	9	Unmodified	_MKKIKTAFV_					0	0	0			REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	533.328088	1064.64162	3.2267	0.0017209	1.3002	0.00069345	4.5269	0.0024143	533.3281389248502	106.05	0.11016	106.2	106.14	106.25	0.15781	0.03242	0.00023381	NaN	3.9444	15	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53829000	+		21947	8615	10861	10905							0.1118872739868948
MKKIKTAFV	9	Unmodified	_MKKIKTAFV_					0	0	0			REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	REV__PER3|p.P856Lfs*32|1|0.12|ENSG00000049246|chr1:7827515-7827515|C/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	533.328088	1064.64162	3.4899	0.0018613	0.44237	0.00023593	3.9323	0.0020972	533.3276254664079	106.01	0.12884	106.18	106.11	106.24	0.16174	0.0055012	-0.00068124	NaN	3.9444	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34903000	+		21948	8615	10861	10905							0.1118872739868948
MKKKVGKK	8	Unmodified	_MKKKVGKK_					0	0	0		ENSG00000155307|ENST00000400566|SAMSN1;nc|ENSG00000155307|Q9NSI8-3|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.2123596072197	3	316.212524	945.615742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.858	1	97.858	97.358	98.358	0								0	0	0	1.0178	1	40913	40913		0	0	1				21949	3414	10862	10906	25161	25161					0.140758779470616
MKKKVGKK	8	Unmodified	_MKKKVGKK_					0	0	0		ENSG00000155307|ENST00000400566|SAMSN1;nc|ENSG00000155307|Q9NSI8-3|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2138549685478	3	316.212524	945.615742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.411	1	99.492	98.992	99.992	0.080376								0	0	0	1.0178	1	41621	41621		0	0	1				21950	3414	10862	10906	25162	25162					0.140758779470616
MKKKVGKK	8	Unmodified	_MKKKVGKK_					0	0	0		ENSG00000155307|ENST00000400566|SAMSN1;nc|ENSG00000155307|Q9NSI8-3|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	ENSG00000155307|ENST00000400566|SAMSN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2144042849541	3	316.212524	945.615742	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.44	1	111.49	110.99	111.99	0.047043								0	0	0	1.0178	1	48049	48049		0	0	1				21951	3414	10862	10906	25163	25163					0.140758779470616
MKKKYKKR	8	Unmodified	_MKKKYKKR_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3536865115166	2	555.352428	1108.6903	2.8087	0.0015598	-0.82608	-0.00045877	1.9827	0.0011011	555.3518410762648	84.998	0.46016	86.594	86.311	86.771	1.5962					54	17	4	0	0	0	0.89051	1	35730	35730		2.3027	0	1	62070000	+		21952	10488	10863	10907	25164	25164					0.14030640758414847
MKKLLKKTA	9	Unmodified	_MKKLLKKTA_					0	0	0		nc|ENSG00000095627|Q9BXT4-3|TDRD1	nc|ENSG00000095627|Q9BXT4-3|TDRD1	nc|ENSG00000095627|Q9BXT4-3|TDRD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1060.696093738079	1	1060.6911	1059.68382	3.9183	0.0041561	3.1369	0.0033273	7.0552	0.0074834	1060.6934961236134	106.01	0.14635	106.18	106.11	106.26	0.16174					21	7	4	0	0	0	0.85019	1	45232	45232		0.52476	0.52476	1	85145000			21953	7839	10864	10908	25165	25165					0.15636702807069014
MKKLTVYELL	10	Unmodified	_MKKLTVYELL_					0	0	0			REV__GAD2|p.V340Sfs*2|1|0.1|ENSG00000136750|chr10:26270680-26270701|CCGTGTACGGAGCATTTGACCC/-|frameshift_variant	REV__GAD2|p.V340Sfs*2|1|0.1|ENSG00000136750|chr10:26270680-26270701|CCGTGTACGGAGCATTTGACCC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2490112185478	3	413.24567	1236.71518	0.34727	0.00014351	4.3221	0.0017861	4.6694	0.0019296	413.58181151188245	32.713	0.31086	33.991	33.856	34.167	1.2782					19	10	3	0	0	0	0.88022	1	13724	13724		1.7423	0	1	689650	+		21954	9992	10865	10909	25166	25166					0.10629231050484123
MKKMRFRLVP	10	Unmodified	_MKKMRFRLVP_					0	0	0		ENST00000549988.5_1_12:76453531-76453949:-|nuORF	ENST00000549988.5_1_12:76453531-76453949:-|nuORF	ENST00000549988.5_1_12:76453531-76453949:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	653.3893920779228	2	653.385945	1304.75734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.08	1	113.23	112.73	113.73	0.14912								0	0	0	0.66237	1	48968	48968		0.45834	0	1				21955	7256	10866	10910	25167	25167					0.1171492797789142
MKLHLKKKKKK	11	Unmodified	_MKLHLKKKKKK_					0	0	0		nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4781982302666	2	705.478692	1408.94283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.05	1	113.05	112.55	113.55	0								0	0	0	0.63775	1	48852	48852		0	0	1				21956	7923	10867	10911	25168	25168					0.2547165376895464
MKLHLKKKKKK	11	Unmodified	_MKLHLKKKKKK_					0	0	0		nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4769775271416	2	705.478692	1408.94283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.31	1	113.31	112.81	113.81	0								0	0	0	0.63775	1	48957	48957		0	0	1				21957	7923	10867	10911	25169	25169					0.2547165376895464
MKLHLKKKKKK	11	Unmodified	_MKLHLKKKKKK_					0	0	0		nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4855224490166	2	705.478692	1408.94283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.44	1	113.44	112.94	113.94	0								0	0	0	0.63775	1	49010	49010		0	0	1				21958	7923	10867	10911	25170	25170					0.2547165376895464
MKLHLKKKKKK	11	Unmodified	_MKLHLKKKKKK_					0	0	0		nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	nc|ENSG00000169871|Q9BRZ2-2|TRIM56	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4790527224541	2	705.478692	1408.94283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.74	1	113.74	113.24	114.24	0								0	0	0	0.63775	1	49128	49128		0	0	1				21959	7923	10867	10911	25171	25171					0.2547165376895464
MKLLMLLLI	9	Unmodified	_MKLLMLLLI_					0	0	0			REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF	REV__ENST00000346329.7_1_11:70281328-70281493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3539916872978	2	544.352717	1086.69088	2.7549	0.0014997	0.17319	9.4274E-05	2.9281	0.0015939	544.3528474339771	107.52	0.19644	107.57	107.48	107.68	0.052452					46	9	7	0	0	0	0.85403	1	46067	46067		0	0	1	173090000	+		21960	12524	10868	10912	25172	25172					0.151002993632801
MKLPLRRQKKW	11	Unmodified	_MKLPLRRQKKW_					0	0	0			REV__ENST00000587366.1_1_18:55280911-55288994:-|nuORF	REV__ENST00000587366.1_1_18:55280911-55288994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	743.4593383669853	2	742.455748	1482.89694	2.7854	0.002068	2.293	0.0017024	5.0784	0.0037705	743.4586206011927	87.052	0.68748	87.052	86.67	87.357	0					122	28	5	0	0	0	1.0395	1	36400	36400		0.30703	0	1	20777000	+		21961	14036	10869	10913	25173	25173					0.17481008586742064
MKLPLRRQKKW	11	Unmodified	_MKLPLRRQKKW_					0	0	0			REV__ENST00000587366.1_1_18:55280911-55288994:-|nuORF	REV__ENST00000587366.1_1_18:55280911-55288994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	742.4614135622978	2	742.455748	1482.89694	2.5054	0.0018601	3.3438	0.0024826	5.8492	0.0043428	743.4589915747908	85.137	0.69163	86.734	86.514	87.206	1.5962					78	28	5	0	0	0	1.0395	1	35768	35768		0.30703	0	1	14302000	+		21962	14036	10869	10913	25174	25174					0.17481008586742064
MKMIGIQV	8	Unmodified	_MKMIGIQV_					0	0	0			REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	REV__tr|A0A553SK25|A0A553SK25_NIACIEndonucleaseMutS2OS=NialliacirculansOX=1397GN=mutS2PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1748229861259	3	307.17497	918.50308	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.597	1	20.045	19.545	20.545	1.448								0	0	0	1.0178	1	7734	7734		0.45834	0	1		+		21963	14931	10870	10914	25175	25175					0.0405686115871049
MKRDLTSVINV	11	Unmodified	_MKRDLTSVINV_					0	0	0		ZNF860|p.V406Sfs*37|1|0.12|ENSG00000197385|chr3:31990292-31990292|A/-|frameshift_variant	ZNF860|p.V406Sfs*37|1|0.12|ENSG00000197385|chr3:31990292-31990292|A/-|frameshift_variant	ZNF860|p.V406Sfs*37|1|0.12|ENSG00000197385|chr3:31990292-31990292|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.9068481326103	3	425.907829	1274.70166	0.41135	0.0001752	-2.1419	-0.00091226	-1.7306	-0.00073706	425.9068368242489	19.419	0.30526	20.942	20.832	21.137	1.5237					18	9	3	0	0	0	1.0191	1	8111	8111		2.6312	1.039	1	822600			21964	17371	10871	10915	25176	25176					0.07529373271245277
MKRFQQRLKRL	11	Unmodified	_MKRFQQRLKRL_					0	0	0			REV__CCDC63|p.Y196Sfs*9|1|0.08|ENSG00000173093|chr12:110880003-110880003|A/-|frameshift_variant	REV__CCDC63|p.Y196Sfs*9|1|0.08|ENSG00000173093|chr12:110880003-110880003|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9728271365166	3	501.973278	1502.89801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.858	1	51.858	51.358	52.358	0								0	0	0	0.63775	1	21627	21627		0.50596	0.051438	1		+		21965	8183	10872	10916	25177	25177					0.16667222955652505
MKRWLHFRIWM	11	Unmodified	_MKRWLHFRIWM_					0	0	0			REV__ENST00000372956.2_1_X:100183094-100183280:-|nuORF	REV__ENST00000372956.2_1_X:100183094-100183280:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	802.4290038943291	2	802.428676	1602.8428	2.2271	0.0017871	-2.0344	-0.0016325	0.19265	0.00015459	802.4279794685173	62.193	0.5001	62.193	61.96	62.461	0					34	15	3	0	0	0	1.0366	1	25964	25964		1.1933	0.88631	1	1450600	+		21966	12687	10873	10917	25178	25178					0.0654909316353951
MKSKKKKKKL	10	Unmodified	_MKSKKKKKKL_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-2|BBX	REV__nc|ENSG00000114439|Q8WY36-2|BBX	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2861816287041	3	416.284571	1245.83188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.891	1	45.891	45.391	46.391	0								0	0	0	0.66264	1	19196	19196		0	0	1		+		21967	9407	10874	10918	25179	25179					0.2188001406091189
MKTRNMEVFF	10	Unmodified	_MKTRNMEVFF_					0	0	0		ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	ENSG00000140093|ENST00000261994|SERPINA10	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827392458916	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11	1	11.082	10.582	11.582	0.082325								0	0	0	0.66254	1	4563	4563		0.15932	0	1				21968	2901	10875	10919	25180	25180					-0.012699271806923207
MKVILGRS	8	Unmodified	_MKVILGRS_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;ENSG00000162365|ENST00000371891|CYP4A22;nc|ENSG00000187048|Q02928-2|CYP4A11;nc|ENSG00000162365|Q5TCH4-2|CYP4A22	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2786132693291	2	452.275855	902.537157	2.9598	0.0013387	2.4678	0.0011161	5.4276	0.0024548	452.2769864792687	73.852	0.75974	74.177	73.663	74.423	0.32494					53	23	4	0	0	0	0.89008	2	30854	30854;30904		2.5775	0	1	4213500			21969	3612	10876	10920	25181;25182	25181					0.08199025641977187
MKVILGRS	8	Unmodified	_MKVILGRS_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;ENSG00000162365|ENST00000371891|CYP4A22;nc|ENSG00000187048|Q02928-2|CYP4A11;nc|ENSG00000162365|Q5TCH4-2|CYP4A22	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.275855	902.537157	3.6696	0.0016597	4.2908	0.0019406	7.9604	0.0036003	452.2775518799456	72.974	0.74564	74.304	73.792	74.537	1.3297	0.074681	0.00049737	NaN	2.5775	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2628500			21970	3612	10876	10920							0.08199025641977187
MKVILGRS	8	Unmodified	_MKVILGRS_					0	0	0		ENSG00000187048|ENST00000310638|CYP4A11;ENSG00000162365|ENST00000371891|CYP4A22;nc|ENSG00000187048|Q02928-2|CYP4A11;nc|ENSG00000162365|Q5TCH4-2|CYP4A22	ENSG00000187048|ENST00000310638|CYP4A11	ENSG00000187048|ENST00000310638|CYP4A11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	452.275855	902.537157	2.8791	0.0013021	4.1162	0.0018617	6.9953	0.0031638	452.2777293727198	72.527	0.71342	74.337	73.861	74.574	1.8101	0.10823	0.00033944	NaN	2.5775	42	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2690200			21971	3612	10876	10920							0.08199025641977187
MKVKHKLG	8	Unmodified	_MKVKHKLG_					0	0	0			REV__ENST00000467850.1_1_2:206629136-206659779:+|nuORF	REV__ENST00000467850.1_1_2:206629136-206659779:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	314.1977416872978	3	314.196874	939.568792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.04	1	101.11	100.61	101.61	0.067009								0	0	0	1.0178	1	42299	42299		0	0	1		+		21972	9517	10877	10921	25183	25183					0.09659018395927887
MKVKPHVE	8	Unmodified	_MKVKPHVE_					0	0	0		ENST00000238497.9_1_18:61067292-61067792:-|nuORF	ENST00000238497.9_1_18:61067292-61067792:-|nuORF	ENST00000238497.9_1_18:61067292-61067792:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	323.1860839724541	3	323.184634	966.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.48	1	100.55	100.05	101.05	0.072716								0	0	0	1.0178	1	42065	42065		0.40072	0.16487	1				21973	5560	10878	10922	25184	25184					0.047467217793496275
MKWERWSYAAK	11	Unmodified	_MKWERWSYAAK_					0	0	0			REV__ENSG00000167972|ENST00000301732|ABCA3	REV__ENSG00000167972|ENST00000301732|ABCA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2481872439384	3	485.911573	1454.71289	1.6998	0.00082594	1.081	0.00052527	2.7808	0.0013512	485.9121255267894	26.804	0.68097	27.066	26.834	27.515	0.26173					66	21	5	0	0	0	0.98969	1	11320	11320		4.4062	1.7749	1	22208000	+		21974	10888	10879	10923	25185	25185					0.003721953653894161
MLAGFITTL	9	Unmodified	_MLAGFITTL_					0	0	0		ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	966.5375244021416	1	966.532866	965.52559	3.1512	0.0030457	0.23431	0.00022647	3.3855	0.0032722	966.5329984645974	81.719	0.33934	82.952	82.78	83.119	1.2332					21	10	3	0	0	0	0.04206	2	34278	34278;34323		74.396	24.727	1	3257700			21975	5260	10880	10924	25186;25187	25186					0.041447838279623284
MLAGFITTL	9	Unmodified	_MLAGFITTL_					0	0	0		ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.7709838747978	2	483.770071	965.52559	3.0859	0.0014929	-0.48547	-0.00023485	2.6004	0.001258	483.76959697122453	81.285	0.2776	82.981	82.766	83.043	1.6959					14	8	2	0	0	0	0.18999	1	34080	34080		34.187	17.245	1	1364900			21976	5260	10880	10924	25188	25188					0.041447838279623284
MLAGFITTL	9	Unmodified	_MLAGFITTL_					0	0	0		ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	ENSG00000215712|ENST00000400788|TMEM242	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	966.5377685427666	1	966.532866	965.52559	3.117	0.0030127	1.1538	0.0011152	4.2708	0.0041278	966.5340444173385	81.242	0.27572	82.938	82.798	83.074	1.6959					15	8	2	0	0	0	0.098957	1	34089	34089		49.669	2.748	1	2863600			21977	5260	10880	10924	25189	25189					0.041447838279623284
MLARLVWNA	9	Unmodified	_MLARLVWNA_					0	0	0		chr19:50996214-50996474|217|65.69|0.33|7.64|-|1|TE_info:AluSz,AluSz_dup96494,Alu,SINE,donor,+,50996474,50996749|KLK8,None|6;AluSz_dup96494|chr19:50996455-50996749:+|1.1822451371104858|0.105733417338726|3.48|423.0|12|2|anti-sense	chr19:50996214-50996474|217|65.69|0.33|7.64|-|1|TE_info:AluSz,AluSz_dup96494,Alu,SINE,donor,+,50996474,50996749|KLK8,None|6	chr19:50996214-50996474|217|65.69|0.33|7.64|-|1|TE_info:AluSz,AluSz_dup96494,Alu,SINE,donor,+,50996474,50996749|KLK8,None|6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	537.2880737185478	2	537.299862	1072.58517	0.19153	0.00010291	-2.1747	-0.0011685	-1.9832	-0.0010656	537.2981033584222	50.826	0.12221	52.802	52.697	52.819	1.9753					8	3	3	0	0	0	0.1006	1	21256	21256		10.824	3.5347	1	2014000			21978	53	10881	10925	25190	25190					0.05178099562021998
MLAWINESL	9	Unmodified	_MLAWINESL_					0	0	0		ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7752563357353	2	538.775885	1075.53722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.511	1	77.293	76.793	77.793	1.7817								0	0	0	0.14418	1	31674	31674		30.225	8.4782	1				21979	1343	10882	10926	25191	25191					0.002469808513069438
MLAWLGRNI	9	Unmodified	_MLAWLGRNI_					0	0	0			REV__ENST00000502083.2_1_8:22865326-22865587:-|nuORF	REV__ENST00000502083.2_1_8:22865326-22865587:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3010742068291	2	537.299862	1072.58517	2.5395	0.0013645	1.5262	0.00082002	4.0657	0.0021845	537.3004305126402	61.176	0.18412	63.142	62.973	63.157	1.9653					8	5	2	0	0	0	0.3154	1	25675	25675		24.674	0	1	6202500	+		21980	13506	10883	10927	25192	25192					0.05178099561999261
MLDEILLQL	9	Unmodified	_MLDEILLQL_					0	0	0		ENST00000511220.1_1_5:92603510-92603882:+|nuORF;ENSG00000106628|ENST00000610533|POLD2	ENST00000511220.1_1_5:92603510-92603882:+|nuORF	ENST00000511220.1_1_5:92603510-92603882:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3093749880791	2	544.307018	1086.59948	4.1022	0.0022329	-0.4858	-0.00026442	3.6164	0.0019684	544.306694529336	93.84	0.50609	94.712	94.513	95.019	0.87176					31	15	3	0	0	0	0.19075	2	39471	39471;39522		34.102	10.954	1	1265800			21981	1577	10884	10928	25193;25194	25193					0.05964707199655095
MLDEILLQL	9	Unmodified	_MLDEILLQL_					0	0	0		ENST00000511220.1_1_5:92603510-92603882:+|nuORF;ENSG00000106628|ENST00000610533|POLD2	ENST00000511220.1_1_5:92603510-92603882:+|nuORF	ENST00000511220.1_1_5:92603510-92603882:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3080932497978	2	544.307018	1086.59948	3.2714	0.0017807	0.54446	0.00029635	3.8159	0.002077	544.307223291029	93.414	0.40472	94.691	94.515	94.92	1.277					26	12	3	0	0	0	0.12174	2	39288	39288;39340		42.095	21.641	1	1452600			21982	1577	10884	10928	25195;25196	25195					0.05964707199655095
MLDTVQAWL	9	Unmodified	_MLDTVQAWL_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7738525271416	2	538.775885	1075.53722	2.6642	0.0014354	-3.7704	-0.0020314	-1.1063	-0.00059604	538.7720651822203	76.231	0.66436	77.525	77.128	77.792	1.2938					29	21	2	0	0	0	0.076627	1	31924	31924		57.471	15.377	1	11185000			21983	954	10885	10929	25197	25197					0.002469808513069438
MLDTVQAWL	9	Unmodified	_MLDTVQAWL_					0	0	0		ENSG00000077009|ENST00000168977|NMRK2;nc|ENSG00000077009|Q9NPI5-3|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	ENSG00000077009|ENST00000168977|NMRK2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	538.775885	1075.53722	2.1272	0.0011461	1.0433	0.00056209	3.1704	0.0017082	538.7753648203641	77.022	0.16051	77.338	77.227	77.387	0.31653	-0.12338	0.004099	NaN	57.471	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	546770			21984	954	10885	10929							0.002469808513069438
MLEKVKLRE	9	Unmodified	_MLEKVKLRE_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	572.8420898318291	2	573.339184	1144.66381	1.4549	0.00083414	1.5943	0.00091406	3.0492	0.0017482	573.3398819647523	66.788	0.29703	68.677	68.467	68.764	1.8889					11	9	2	0	0	0	0.11684	1	28035	28035		7.9102	1.187	1	854570	+		21985	10469	10886	10930	25198	25198					0.0972690707642414
MLEQMLIWRL	10	Unmodified	_MLEQMLIWRL_					0	0	0		ENST00000178640.9_1_15:67985880-67995726:+|nuORF	ENST00000178640.9_1_15:67985880-67995726:+|nuORF	ENST00000178640.9_1_15:67985880-67995726:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	666.8633911013603	2	666.861969	1331.70938	2.5457	0.0016976	-0.21259	-0.00014177	2.3331	0.0015559	666.8615372172756	65.383	0.4624	66.782	66.632	67.094	1.3989					35	14	3	0	0	0	0.70618	1	27504	27504		18.146	1.0335	1	1506700			21986	5505	10887	10931	25199	25199					0.05679809267167002
MLEYYEEP	8	Unmodified	_MLEYYEEP_					0	0	0			REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.2280151247978	2	537.228433	1072.44231	1.7652	0.00094832	-2.7862	-0.0014968	-1.021	-0.00054849	537.2272226256295	75.328	0.37926	75.328	75.122	75.502	0					38	11	5	0	0	0	0.88055	1	31380	31380		8.5933	1.8701	1	3833400	+		21987	15812	10888	10932	25200	25200					-0.0910099741056456
MLEYYEEP	8	Unmodified	_MLEYYEEP_					0	0	0			REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	537.228433	1072.44231	2.6365	0.0014164	-2.601	-0.0013973	0.035501	1.9072E-05	537.227058947862	74.905	0.37286	75.23	75.02	75.393	0.32463	-0.0020957	-0.00036873	NaN	8.5933	47	11	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4345000	+		21988	15812	10888	10932							-0.0910099741056456
MLEYYEEP	8	Unmodified	_MLEYYEEP_					0	0	0			REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	537.228433	1072.44231	3.6548	0.0019635	-3.3519	-0.0018008	0.3029	0.00016273	537.2272406033554	73.872	0.47087	75.19	74.935	75.405	1.318	-0.041338	-0.0011756	NaN	8.5933	53	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9209000	+		21989	15812	10888	10932							-0.0910099741056456
MLEYYEEP	8	Unmodified	_MLEYYEEP_					0	0	0			REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	REV__tr|A0A7D7A0K6|A0A7D7A0K6_9CLOTSporecoatassociatedproteinCotJAOS=ClostridiumintestinaleOX=36845GN=HZF06_10315PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.228433	1072.44231	2.8235	0.0015168	-1.1781	-0.0006329	1.6454	0.00088395	537.2276210136099	73.382	0.46533	75.179	74.943	75.409	1.7962	-0.053041	0.0011601	NaN	8.5933	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6159800	+		21990	15812	10888	10932							-0.0910099741056456
MLFALAVLSL	10	Unmodified	_MLFALAVLSL_					0	0	0			REV__ENST00000541225.5_1_17:66883094-66937097:-|nuORF	REV__ENST00000541225.5_1_17:66883094-66937097:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3260375857353	2	539.322471	1076.63039	1.8207	0.00098194	2.4396	0.0013157	4.2603	0.0022977	539.3228500182837	66.205	0.92741	68.094	67.54	68.467	1.8889					72	29	4	0	0	0	0.45153	1	27806	27806		30.225	0	1	4530400	+		21991	10139	10889	10933	25201	25201					0.09513905304538639
MLFGHPLLV	9	Unmodified	_MLFGHPLLV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7952148318291	2	513.793881	1025.57321	1.8906	0.00097139	1.1822	0.00060742	3.0728	0.0015788	513.7944647869186	67.866	0.3487	67.866	67.663	68.012	0					18	10	2	0	0	0	0.08022	2	28234	28234;28285		56.048	27.875	1	984840			21992	1384	10890	10934	25202;25203	25202					0.06144482818808683
MLFGHPLLV	9	Unmodified	_MLFGHPLLV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.7949096560478	2	513.793881	1025.57321	1.9364	0.00099491	-1.7031	-0.00087503	0.23332	0.00011988	513.7934531155488	67.211	0.41766	67.533	67.387	67.805	0.32269					28	13	3	0	0	0	0.08022	1	28155	28155		56.048	27.875	1	1211900			21993	1384	10890	10934	25204	25204					0.06144482818808683
MLFGHPLLV	9	Unmodified	_MLFGHPLLV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7949706912041	2	513.793881	1025.57321	2.4572	0.0012625	-1.2937	-0.00066472	1.1635	0.00059779	513.793287451543	65.93	0.51208	67.329	67.034	67.546	1.3989					43	16	3	0	0	0	0.0084224	3	27595	27595;27639;27695		109.15	72.688	1	6973100			21994	1384	10890	10934	25205;25206;25207	25205					0.06144482818808683
MLFGHPLLV	9	Unmodified	_MLFGHPLLV_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000488848.1_1_X:47102801-47104466:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7952148318291	2	513.793881	1025.57321	2.1162	0.0010873	-1.0485	-0.00053872	1.0677	0.00054857	513.7935718138874	65.42	0.49679	67.328	67.063	67.559	1.9085					43	15	4	0	0	0	0.026036	2	27430	27430;27471		93.763	57.297	1	8731700			21995	1384	10890	10934	25208;25209	25208					0.06144482818808683
MLFKMKIA	8	Unmodified	_MLFKMKIA_					0	0	0			REV__tr|A0A553SFU6|A0A553SFU6_NIACIEcsCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_09520PE=4SV=1	REV__tr|A0A553SFU6|A0A553SFU6_NIACIEcsCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_09520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2879821658134	2	491.284834	980.555116	3.7023	0.0018189	2.9146	0.0014319	6.6168	0.0032508	491.28604068043313	97.711	0.14731	97.938	97.863	98.011	0.22776					9	4	3	0	0	0	0.87803	1	41124	41124		10.183	1.5901	1	10217000	+		21996	14722	10891	10935	25210	25210					0.06406024572447677
MLFPGSIAL	9	Unmodified	_MLFPGSIAL_					0	0	0		ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5201293826103	1	948.522301	947.515025	2.4718	0.0023446	2.7461	0.0026048	5.218	0.0049494	948.5240340369669	83.029	0.34322	84.667	84.447	84.791	1.6379					17	10	3	0	0	0	0.033521	2	34792	34792;34856		81.864	28.288	1	3002100			21997	1343	10892	10936	25211;25212	25211					0.03916801173522799
MLFPGSIAL	9	Unmodified	_MLFPGSIAL_					0	0	0		ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	ENSG00000101367|ENST00000375571|MAPRE1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	948.522301	947.515025	2.4095	0.0022855	1.4638	0.0013884	3.8733	0.0036739	948.5239054452346	84.966	0.44784	84.966	84.716	85.164	0	0.18531	-0.00049982	NaN	81.864	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	682230			21998	1343	10892	10936							0.03916801173522799
MLFTGGYGL	9	Unmodified	_MLFTGGYGL_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	958.4760009646416	1	958.470266	957.462989	1.5822	0.0015165	3.4165	0.0032746	4.9987	0.0047911	958.472903910575	71.229	0.19153	71.552	71.431	71.622	0.32359					9	5	2	0	0	0	0.3154	1	29830	29830		24.674	8.9057	1	966250			21999	1427	10893	10937	25213	25213					-0.017443622402083747
MLFTGGYGL	9	Unmodified	_MLFTGGYGL_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.4736816287041	1	958.470266	957.462989	2.1424	0.0020534	0.72247	0.00069247	2.8649	0.0027459	958.4703898342963	70.122	0.34348	71.476	71.272	71.616	1.3536					23	10	3	0	0	0	0.010702	1	29424	29424		106.85	59.925	1	3437800			22000	1427	10893	10937	25214	25214					-0.017443622402083747
MLFTGGYGL	9	Unmodified	_MLFTGGYGL_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	958.4690429568291	1	958.470266	957.462989	2.6389	0.0025293	-0.66663	-0.00063895	1.9723	0.0018904	958.4689494825506	69.6	0.31476	71.452	71.293	71.608	1.853					19	9	3	0	0	0	0.061246	2	29193	29193;29246		63.563	35.076	1	1531900			22001	1427	10893	10937	25215;25216	25215					-0.017443622402083747
MLGNRKYM	8	Unmodified	_MLGNRKYM_					0	0	0			REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	REV__ENST00000472427.5_1_9:129677191-129778941:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.1742126345634	3	338.17374	1011.49939	2.0591	0.00069633	-0.86245	-0.00029166	1.1967	0.00040468	338.1736791213933	85.614	0.40485	85.867	85.632	86.037	0.25227					25	12	3	0	0	0	0.88791	1	35849	35849		3.9444	2.1002	1	1150300	+		22002	12697	10894	10938	25217	25217					-0.005898086151546522
MLHCMGESL	9	Unmodified	_MLHCMGESL_					0	0	0			REV__nc|ENSG00000153157|Q5T4T6-2|SYCP2L	REV__nc|ENSG00000153157|Q5T4T6-2|SYCP2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.8165771365166	3	340.815224	1019.42384	1.5132	0.00051572	0.21773	7.4206E-05	1.7309	0.00058993	340.81595957448303	80.734	0.36198	81.967	81.771	82.133	1.2332					40	11	4	0	0	0	0.22519	1	33897	33897		21.537	1.0834	1	4806100	+		22003	10446	10895	10939	25218	25218					-0.08509153857755791
MLHCMGESL	9	Unmodified	_MLHCMGESL_					0	0	0			REV__nc|ENSG00000153157|Q5T4T6-2|SYCP2L	REV__nc|ENSG00000153157|Q5T4T6-2|SYCP2L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	340.815224	1019.42384	1.5132	0.00051572	0.21773	7.4206E-05	1.7309	0.00058993	340.81595957448303	80.734	0.36198	81.967	81.771	82.133	1.2332	-0.0010004	0.00047142	NaN	21.537	40	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4806100	+		22004	10446	10895	10939							-0.08509153857755791
MLIAVVVFI	9	Unmodified	_MLIAVVVFI_					0	0	0			REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	REV__nc|ENSG00000107731|Q8IZJ1-2|UNC5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8157836794853	2	502.814282	1003.61401	0.89564	0.00045034	0.15921	8.0054E-05	1.0548	0.00053039	502.8143264285569	80.232	0.91013	81.948	81.291	82.201	1.7167					92	29	5	0	0	0	0.75267	1	33533	33533		5.2307	0	1	105580000	+		22005	9238	10896	10940	25219	25219					0.11234824138443855
MLIKFLTTI	9	Unmodified	_MLIKFLTTI_					0	0	0			REV__tr|A0A7D6W0A9|A0A7D6W0A9_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22660PE=4SV=1	REV__tr|A0A7D6W0A9|A0A7D6W0A9_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22660PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3325073122978	2	540.330296	1078.64604	2.1501	0.0011618	1.0743	0.00058047	3.2244	0.0017423	540.3308373957354	69.207	1.3996	70.572	69.447	70.847	1.3657					105	45	3	0	0	0	0.76456	1	28906	28906		4.756	0	1	3296600	+		22006	15577	10897	10941	25220	25220					0.1098619182157563
MLIKVKEPKR	10	Unmodified	_MLIKVKEPKR_					0	0	0		ENST00000533242.1_1_14:24700862-24701497:-|nuORF	ENST00000533242.1_1_14:24700862-24701497:-|nuORF	ENST00000533242.1_1_14:24700862-24701497:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.5992614626884	3	414.596926	1240.76895	3.3159	0.0013748	0.074881	3.1046E-05	3.3908	0.0014058	414.596868345118	91.325	0.5256	92.691	92.406	92.932	1.366					49	16	4	0	0	0	0.89803	1	38394	38394		0.69767	0.07084	1	9602500			22007	7183	10898	10942	25221	25221					0.15819448272850423
MLILDFIYNRL	11	Unmodified	_MLILDFIYNRL_					0	0	0		tr|A0A553SQ17|A0A553SQ17_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16085PE=4SV=1	tr|A0A553SQ17|A0A553SQ17_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16085PE=4SV=1	tr|A0A553SQ17|A0A553SQ17_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	705.8930541872978	2	705.894323	1409.77409	1.5459	0.0010912	-1.1355	-0.00080156	0.41038	0.00028968	705.8935432949432	84.618	0.55913	85.777	85.559	86.118	1.159					41	17	3	0	0	0	0.83203	1	35548	35548		13.906	0.86358	1	2577400			22008	16491	10899	10943	25222	25222					0.08559707344829803
MLINAVIRP	9	Unmodified	_MLINAVIRP_					0	0	0			REV__tr|A0A7D6VQ15|A0A7D6VQ15_9CLOTDNArepairproteinRadCOS=ClostridiumintestinaleOX=36845GN=radCPE=3SV=1	REV__tr|A0A7D6VQ15|A0A7D6VQ15_9CLOTDNArepairproteinRadCOS=ClostridiumintestinaleOX=36845GN=radCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8750488162041	3	342.8758	1025.60557	-1.6052	-0.00055039	-0.14007	-4.8027E-05	-1.7453	-0.00059842	342.87564392034113	37.206	1.0173	37.206	36.643	37.66	0					116	47	3	0	0	0	0.82114	1	15681	15681		2.4985	0.21571	1	16067000	+		22009	15369	10900	10944	25223	25223					0.09379270221802471
MLIVKMLLKI	10	Unmodified	_MLIVKMLLKI_					0	0	0			REV__ENST00000522944.5_1_8:27667910-27668483:-|nuORF	REV__ENST00000522944.5_1_8:27667910-27668483:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2010986208916	4	301.199825	1200.77019	1.0617	0.00031979	2.8374	0.00085464	3.8992	0.0011744	301.20067362691475	46.729	0.67088	47.06	46.562	47.233	0.33034					30	22	2	0	0	0	0.89803	1	19594	19594		0.69767	0.55777	1	2296600	+		22010	13639	10901	10945	25224	25224					0.17783946317422306
MLKKLLKAI	9	Unmodified	_MLKKLLKAI_					0	0	0		ENST00000535593.5_1_12:21668856-21668949:+|nuORF	ENST00000535593.5_1_12:21668856-21668949:+|nuORF	ENST00000535593.5_1_12:21668856-21668949:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1058.384326159954	1	1057.71658	1056.70931	2.0615	0.0021805	1.6974	0.0017954	3.759	0.0039759	1057.7217731078058	36.173	0.085587	36.475	36.422	36.507	0.30197					9	7	2	0	0	0	0.11898	1	15199	15199		2.3027	0	1	11241000			22011	7198	10902	10946	25225	25225					0.18322177329469014
MLKNKELV	8	Unmodified	_MLKNKELV_					0	0	0			REV__nc|ENSG00000133816|O94851|MICAL2	REV__nc|ENSG00000133816|O94851|MICAL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.7539550662041	2	487.788795	973.563038	2.7459	0.0013394	3.0531	0.0014893	5.799	0.0028287	487.790436564238	78.565	0.55347	79.832	79.481	80.034	1.2668					44	17	3	0	0	0	2.3239	1	32871	32871		14.582	0	1	2568500	+		22012	14437	10903	10947	25226	25226					0.07519875093578321
MLLDFIQHI	9	Unmodified	_MLLDFIQHI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant;ATR|p.V66L|1|0.2|ENSG00000175054|chr3:142566217-142566217|C/G|missense_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3091308474541	2	565.307352	1128.60015	2.7321	0.0015445	-0.067344	-3.807E-05	2.6648	0.0015064	565.3083931744031	83.022	0.33472	84.214	84.026	84.361	1.1925					20	10	3	0	0	0	0.073578	1	34863	34863		58.679	30.192	1	1567300			22013	4351	10904	10948	25227	25227					0.04099546639349683
MLLDFIQHI	9	Unmodified	_MLLDFIQHI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant;ATR|p.V66L|1|0.2|ENSG00000175054|chr3:142566217-142566217|C/G|missense_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	565.307352	1128.60015	2.3255	0.0013146	4.8692	0.0027526	7.1946	0.0040672	565.8118642366193	83.936	0.18442	84.196	84.096	84.28	0.26083	-0.0039037	0.0023001	NaN	58.679	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	224340			22014	4351	10904	10948							0.04099546639349683
MLLDVMHTV	9	Unmodified	_MLLDVMHTV_					0	0	0		nc|ENSG00000140694|O95453-4|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;ENSG00000140694|ENST00000437198|PARN	nc|ENSG00000140694|O95453-4|PARN	nc|ENSG00000140694|O95453-4|PARN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7723266482353	2	529.772288	1057.53002	2.503	0.001326	-3.5022	-0.0018554	-0.99919	-0.00052934	529.7701962966695	60.021	0.39031	61.44	61.206	61.597	1.4196					27	12	3	0	0	0	0.031324	2	25139	25139;25192		85.357	43.262	1	3145600			22015	2931	10905	10949	25228;25229	25228					0.0035592497922607436
MLLDVMHTV	9	Unmodified	_MLLDVMHTV_					0	0	0		nc|ENSG00000140694|O95453-4|PARN;nc|ENSG00000140694|O95453-2|PARN;nc|ENSG00000140694|O95453-3|PARN;ENSG00000140694|ENST00000437198|PARN	nc|ENSG00000140694|O95453-4|PARN	nc|ENSG00000140694|O95453-4|PARN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7725707888603	2	529.772288	1057.53002	2.944	0.0015596	-3.2757	-0.0017354	-0.3317	-0.00017573	529.7701111794621	59.502	0.35416	61.471	61.286	61.64	1.969					22	11	3	0	0	0	0.076627	1	24954	24954		57.471	9.1255	1	2676500			22016	2931	10905	10949	25230	25230					0.0035592497922607436
MLLENVLTR	9	Unmodified	_MLLENVLTR_					0	0	0			REV__tr|A0A553SFS0|A0A553SFS0_NIACIPentapeptiderepeat-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09315PE=4SV=1	REV__tr|A0A553SFS0|A0A553SFS0_NIACIPentapeptiderepeat-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09315PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2531310915947	3	363.542598	1087.60597	0.21818	7.9319E-05	-2.8436	-0.0010338	-2.6254	-0.00095446	363.54198094171466	24.126	0.80126	25.367	24.715	25.516	1.241					36	25	2	0	0	0	0.11767	1	10147	10147		4.1895	0	1	309580	+		22017	14716	10906	10950	25231	25231					0.06566645150996919
MLLFLTRFL	9	Unmodified	_MLLFLTRFL_					0	0	0			REV__ENSG00000186188|ENST00000371481|FFAR4	REV__ENSG00000186188|ENST00000371481|FFAR4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	577.7738525271416	2	577.343738	1152.67292	2.9595	0.0017086	-2.357	-0.0013608	0.60246	0.00034782	577.3425560437794	73.764	0.42891	75.56	75.471	75.9	1.7962					18	13	2	0	0	0	0.11799	1	30949	30949		9.3474	4.5914	1	917530	+		22018	11492	10907	10951	25232	25232					0.10269300432787531
MLLISWVL	8	Unmodified	_MLLISWVL_					0	0	0			REV__tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	REV__tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.7533447146416	2	487.790807	973.56706	1.9549	0.00095361	-0.78783	-0.0003843	1.1671	0.00056931	487.79076019285355	78.232	0.62337	79.967	79.51	80.133	1.735					43	19	3	0	0	0	2.3239	1	32634	32634		11.114	0	1	2296000	+		22019	14824	10908	10952	25233	25233					0.07921964587285402
MLLLFKKT	8	Unmodified	_MLLLFKKT_					0	0	0			REV__ENSG00000117115|ENST00000375486|PADI2	REV__ENSG00000117115|ENST00000375486|PADI2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.3128845095634	2	497.311906	992.60926	1.5945	0.00079295	0.065121	3.2385E-05	1.6596	0.00082533	497.31194619922746	76.024	0.79001	76.024	75.406	76.196	0					55	24	3	0	0	0	0.89176	1	31585	31585		0.79363	0	1	3855800	+		22020	9492	10909	10953	25234	25234					0.11265939995678309
MLLLILRHL	9	Unmodified	_MLLLILRHL_					0	0	0		ENST00000230640.9_1_5:54635965-54636001:+|nuORF	ENST00000230640.9_1_5:54635965-54636001:+|nuORF	ENST00000230640.9_1_5:54635965-54636001:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.5789062380791	3	374.579095	1120.71546	-0.84219	-0.00031547	0.10152	3.8027E-05	-0.74068	-0.00027744	374.5790949951204	33.479	0.40362	33.479	33.265	33.668	0					32	12	3	0	0	0	0.8462	3	14018	13975;14018;14068		1.0715	1.0715	1	5454300			22021	5548	10910	10954	25235;25236;25237	25236					0.15992695560998982
MLLLSQMGPD	10	Unmodified	_MLLLSQMGPD_					0	0	0		nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;ENSG00000091428|ENST00000397081|RAPGEF4;RAPGEF4|p.E469Nfs*32|1|0.05|ENSG00000091428|chr2:172990840-172990840|G/-|frameshift_variant	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7748290896416	2	552.775028	1103.5355	2.2209	0.0012277	-3.4422	-0.0019028	-1.2213	-0.0006751	552.7733721937205	78.631	0.52637	80.366	80.04	80.567	1.735					49	16	4	0	0	0	0.77604	1	33012	33012		14.838	0.25658	1	10079000			22022	1150	10911	10955	25238	25238					-0.012123962289479095
MLLNTVWNT	9	Unmodified	_MLLNTVWNT_					0	0	0		ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.2830078005791	2	546.281334	1090.54812	1.3336	0.00072851	-0.60464	-0.0003303	0.72894	0.0003982	546.2809108336274	68.784	0.25098	68.784	68.673	68.924	0					13	7	2	0	0	0	0.46905	1	28648	28648		16.942	0	1	795070			22023	6145	10912	10956	25239	25239					0.006463832255803936
MLLNTVWNT	9	Unmodified	_MLLNTVWNT_					0	0	0		ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.2809936404228	2	546.281334	1090.54812	1.5614	0.00085297	-0.32826	-0.00017932	1.2332	0.00067365	546.2812263355297	68.384	0.31061	68.706	68.534	68.844	0.32224					15	9	2	0	0	0	0.46905	1	28606	28606		16.942	0	1	779390			22024	6145	10912	10956	25240	25240					0.006463832255803936
MLLNTVWNT	9	Unmodified	_MLLNTVWNT_					0	0	0		ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2809936404228	2	546.281334	1090.54812	1.6495	0.0009011	0.61572	0.00033635	2.2652	0.0012374	546.2813290691372	67.235	0.48558	68.624	68.376	68.861	1.3888					35	15	3	0	0	0	0.34572	1	28155	28155		23.148	2.6948	1	5372900			22025	6145	10912	10956	25241	25241					0.006463832255803936
MLLNTVWNT	9	Unmodified	_MLLNTVWNT_					0	0	0		ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	ENST00000372725.5_1_10:76585359-76602521:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	546.281334	1090.54812	1.4092	0.00076984	0.14614	7.9834E-05	1.5554	0.00084967	546.2812250878131	66.799	0.42362	68.688	68.436	68.86	1.8889	-0.012491	6.6513E-05	NaN	23.148	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4566300			22026	6145	10912	10956							0.006463832255803936
MLLNYQRGF	9	Unmodified	_MLLNYQRGF_					0	0	0		ENST00000368046.7_2_1:160648705-160648738:-|nuORF	ENST00000368046.7_2_1:160648705-160648738:-|nuORF	ENST00000368046.7_2_1:160648705-160648738:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	571.2927734255791	2	571.294776	1140.575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.395	1	41.231	40.731	41.731	1.8366								0	0	0	0.42693	1	16516	16516		2.3027	0.4585	1				22027	6081	10913	10957	25242	25242					0.010334918367789214
MLLREEIFRKW	11	Unmodified	_MLLREEIFRKW_					0	0	0			REV__ENSG00000163874|ENST00000373087|ZC3H12A	REV__ENSG00000163874|ENST00000373087|ZC3H12A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.6252014040947	3	507.61839	1519.83334	2.1265	0.0010794	-0.56883	-0.00028875	1.5576	0.00079069	507.6173545957951	45.485	1.4452	45.485	45.091	46.536	0					134	45	5	0	0	0	1.0388	1	19320	19320		0.50596	0	1	9828500	+		22028	10704	10914	10958	25243	25243					0.0942160335898734
MLLSVPLLLG	10	Unmodified	_MLLSVPLLLG_					0	0	0		ENSG00000179218|ENST00000316448|CALR;ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3310424685478	2	528.330296	1054.64604	3.6693	0.0019386	-2.3438	-0.0012383	1.3255	0.0007003	528.3287557654538	97.679	0.087357	97.907	97.863	97.951	0.22776					4	2	2	0	0	0	0.052125	1	41111	41111		77.984	24.409	1	10072000			22029	4508	10915	10959	25244	25244					0.12090191821584995
MLLSVPLLLG	10	Unmodified	_MLLSVPLLLG_					0	0	0		ENSG00000179218|ENST00000316448|CALR;ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3312866091728	2	528.330296	1054.64604	3.3864	0.0017891	-2.4418	-0.0012901	0.94454	0.00049903	528.3291087179468	97.603	0.087311	97.859	97.814	97.901	0.25636					4	2	2	0	0	0	0.062633	1	41065	41065		97.075	26.359	1	9918400			22030	4508	10915	10959	25245	25245					0.12090191821584995
MLLSVPLLLG	10	Oxidation (M)	_M(Oxidation (M))LLSVPLLLG_		M(1)LLSVPLLLG		M(57)LLSVPLLLG	0	0	1		ENSG00000179218|ENST00000316448|CALR;ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3312866091728	2	536.327753	1070.64095	3.4384	0.0018441	1.2913	0.00069257	4.7297	0.0025367	536.3286462058071	94.065	0.47858	95.253	94.986	95.464	1.1887					32	14	3	0	0	0	0.13671	1	39598	39598		57.471	28.985	1	1307100			22031	4508	10915	10960	25246	25246		76			0.10845887958976164
MLLSVPLLLG	10	Oxidation (M)	_M(Oxidation (M))LLSVPLLLG_					0	0	1		ENSG00000179218|ENST00000316448|CALR;ENST00000587486.6_1_19:13049472-13049670:+|nuORF;ENST00000590325.1_1_19:13049472-13051084:+|nuORF	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	536.327753	1070.64095	4.289	0.0023003	1.1547	0.00061929	5.4436	0.0029196	536.3285714768319	94.486	0.47386	95.227	95.013	95.487	0.74124	-0.013211	-6.9012E-05	NaN	57.471	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1672400			22032	4508	10915	10960				76			0.10845887958976164
MLLYIWKKI	9	Unmodified	_MLLYIWKKI_					0	0	0			REV__tr|A0A7D6VMQ7|A0A7D6VMQ7_9CLOTEALdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12725PE=4SV=1	REV__tr|A0A7D6VMQ7|A0A7D6VMQ7_9CLOTEALdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12725PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3665038943291	2	604.367213	1206.71987	2.556	0.0015448	-2.2139	-0.001338	0.34213	0.00020677	604.3655960912371	92.379	0.52594	92.548	92.249	92.775	0.16835					60	16	5	0	0	0	0.84963	1	38710	38710		0.6015	0.14316	1	15137000	+		22033	15321	10916	10961	25247	25247					0.12478159983925252
MLMDKILHL	9	Unmodified	_MLMDKILHL_					0	0	0		ENST00000512992.1_1_5:176562171-176562345:+|nuORF	ENST00000512992.1_1_5:176562171-176562345:+|nuORF	ENST00000512992.1_1_5:176562171-176562345:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1018554568291	3	371.876812	1112.60861	2.0105	0.00074764	0.62651	0.00023298	2.637	0.00098063	371.8770726690674	61.618	0.28025	63.035	62.865	63.145	1.4177					14	8	2	0	0	0	0.11938	1	25832	25832		0	0	1	1057300			22034	7044	10917	10962	25248	25248					0.05680777284328542
MLMDKILHL	9	Unmodified	_MLMDKILHL_					0	0	0		ENST00000512992.1_1_5:176562171-176562345:+|nuORF	ENST00000512992.1_1_5:176562171-176562345:+|nuORF	ENST00000512992.1_1_5:176562171-176562345:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1021606326103	3	371.876812	1112.60861	2.2468	0.00083552	-0.77953	-0.00028989	1.4672	0.00054563	371.87673787627796	61.055	0.33674	63.02	62.82	63.157	1.9653					16	10	2	0	0	0	0.11938	1	25585	25585		0	0	1	641430			22035	7044	10917	10962	25249	25249					0.05680777284328542
MLMFEFRENK	10	Unmodified	_MLMFEFRENK_					0	0	0			REV__tr|A0A7D6W3U7|A0A7D6W3U7_9CLOTBglGfamilytranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11245PE=4SV=1	REV__tr|A0A7D6W3U7|A0A7D6W3U7_9CLOTBglGfamilytranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.8857299685478	3	448.886148	1343.63661	2.5315	0.0011363	-3.2529	-0.0014602	-0.72143	-0.00032384	448.8846201487216	39.882	0.33937	41.192	40.991	41.33	1.3102					24	10	3	0	0	0	0.78827	1	16708	16708		13.519	0	1	5945700	+		22036	15618	10918	10963	25250	25250					-0.02145944526250787
MLNLEGRHS	9	Unmodified	_MLNLEGRHS_					0	0	0			REV__sp|Q6SW73|ICP27_HCMVMmRNAexportfactorICP27homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL69PE=3SV=1	REV__sp|Q6SW73|ICP27_HCMVMmRNAexportfactorICP27homologOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL69PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.3140136599541	2	528.766383	1055.51821	2.5227	0.0013339	-1.2563	-0.00066427	1.2664	0.00066963	528.7669911966027	80.898	0.46313	82.594	82.303	82.766	1.6959					18	14	2	0	0	0	0.10844	1	33829	33829		16.942	1.1741	1	1147500	+		22037	14654	10919	10964	25251	25251					-0.007325557197418675
MLPEILIIH	9	Unmodified	_MLPEILIIH_					0	0	0		ENST00000469080.5_1_X:47092634-47106681:+|nuORF;ENSG00000102226|ENST00000377107|USP11;nc|ENSG00000102226|P51784|USP11;ENST00000467378.1_1_X:47106498-47106892:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	ENST00000469080.5_1_X:47092634-47106681:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8217651247978	2	539.820095	1077.62564	3.3542	0.0018107	-1.1601	-0.00062626	2.1941	0.0011844	539.819573215168	94.198	0.56946	95.386	95.174	95.743	1.1887					41	17	3	0	0	0	0.44535	1	39676	39676		18.135	4.6271	1	2737300			22038	1384	10920	10965	25252	25252					0.08993021161791148
MLPRKLKRIL	10	Unmodified	_MLPRKLKRIL_					0	0	0		nc|ENSG00000142185|O94759-2|TRPM2;ENSG00000142185|ENST00000397928|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1268.648486316204	1	1267.83949	1266.83222	1.6168	0.0020498	3.3076	0.0041935	4.9244	0.0062433	1268.8428663239026	35.295	0.13913	35.295	35.183	35.322	0					22	14	2	0	0	0	0.89646	1	14780	14780		1.8442	0.19162	1	12462000			22039	2987	10921	10966	25253	25253					0.20947433780770552
MLPRKLKRIL	10	Unmodified	_MLPRKLKRIL_					0	0	0		nc|ENSG00000142185|O94759-2|TRPM2;ENSG00000142185|ENST00000397928|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1267.83949	1266.83222	2.5871	0.00328	10.559	0.013387	13.146	0.016668	1268.853629175113	35.282	0.074448	35.581	35.56	35.635	0.29942	0.14311	0.0049249	NaN	1.8442	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6738500			22040	2987	10921	10966							0.20947433780770552
MLQDFQIQA	9	Unmodified	_MLQDFQIQA_					0	0	0		ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	547.2727538943291	2	547.270967	1092.52738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.86	1	55.86	55.36	56.36	0								0	0	0	0.34787	1	23271	23271		13.906	1.3745	1				22041	870	10922	10967	25254	25254					-0.015182071540721154
MLQDFQIQA	9	Unmodified	_MLQDFQIQA_					0	0	0		ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.2724487185478	2	547.270967	1092.52738	2.0632	0.0011291	1.8445	0.0010095	3.9077	0.0021386	547.2715703313069	55.435	0.28489	55.756	55.548	55.833	0.32088					15	8	2	0	0	0	0.35391	1	23174	23174		22.736	14.143	1	769290			22042	870	10922	10967	25255	25255					-0.015182071540721154
MLQDFQIQA	9	Unmodified	_MLQDFQIQA_					0	0	0		ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.2722045779228	2	547.270967	1092.52738	1.5125	0.00082774	-0.44672	-0.00024448	1.0658	0.00058327	547.2714736264468	54.293	0.53611	55.698	55.459	55.995	1.4048					34	16	4	0	0	0	0.15456	2	22739	22688;22739		38.176	8.628	1	4208900			22043	870	10922	10967	25256;25257	25257					-0.015182071540721154
MLQDFQIQA	9	Unmodified	_MLQDFQIQA_					0	0	0		ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	ENSG00000071553|ENST00000369762|ATP6AP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2701904177666	2	547.270967	1092.52738	1.2027	0.0006582	-0.83655	-0.00045782	0.36614	0.00020038	547.2708199608229	53.83	0.50058	55.8	55.471	55.971	1.9697					25	15	2	0	0	0	0.086433	2	22532	22532;22581		53.833	19.73	1	4132100			22044	870	10922	10967	25258;25259	25258					-0.015182071540721154
MLQGYWPI	8	Unmodified	_MLQGYWPI_					0	0	0			REV__tr|A0A7D7A0P6|A0A7D7A0P6_9CLOTasparaginesynthase(glutamine-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=asnBPE=3SV=1	REV__tr|A0A7D7A0P6|A0A7D7A0P6_9CLOTasparaginesynthase(glutamine-hydrolyzing)OS=ClostridiumintestinaleOX=36845GN=asnBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2553893923759	2	504.254588	1006.49462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.249	1	90.653	90.153	91.153	1.4045								0	0	0	1.0178	1	37602	37602		10.183	0.83596	1		+		22045	15814	10923	10968	25260	25260					-0.008363694862850934
MLQLGTLYL	9	Unmodified	_MLQLGTLYL_					0	0	0			REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2977783083916	2	526.296453	1050.57835	5.9599	0.0031367	2.3411	0.0012321	8.3011	0.0043688	526.8011015333575	88.661	0.42034	89.717	89.498	89.918	1.0562					21	12	2	0	0	0	0.44535	1	37408	37408		18.135	0	1	662990	+		22046	14723	10924	10969	25261	25261					0.055087418907760366
MLQLGTLYL	9	Unmodified	_MLQLGTLYL_					0	0	0			REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	526.296453	1050.57835	2.4397	0.001284	-1.2664	-0.00066648	1.1733	0.00061753	526.2951499277814	90.095	0.16115	90.095	90	90.161	0	0.18913	-0.00059296	NaN	18.135	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	158090	+		22047	14723	10924	10969							0.055087418907760366
MLQLGTLYL	9	Unmodified	_MLQLGTLYL_					0	0	0			REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	REV__tr|A0A553SFV1|A0A553SFV1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_09525PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.296453	1050.57835	5.9599	0.0031367	2.3411	0.0012321	8.3011	0.0043688	526.8011015333575	88.661	0.42034	89.717	89.498	89.918	1.0562	-0.18913	0.0032043	NaN	18.135	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	662990	+		22048	14723	10924	10969							0.055087418907760366
MLQPYMPTV	9	Unmodified	_MLQPYMPTV_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000551805.1_1_12:57908749-57909143:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2683593630791	2	540.266838	1078.51912	3.4284	0.0018522	-0.21294	-0.00011504	3.2154	0.0017372	540.267042535533	60.363	0.28547	62.329	62.26	62.546	1.9653					13	8	2	0	0	0	0.12174	1	25359	25359		42.095	20.348	1	814800			22049	3940	10925	10970	25262	25262					-0.016994773950727904
MLQVQVNLPV	10	Unmodified	_MLQVQVNLPV_					0	0	0		nc|ENSG00000101443|Q14508-2|WFDC2	nc|ENSG00000101443|Q14508-2|WFDC2	nc|ENSG00000101443|Q14508-2|WFDC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8856994509697	3	380.886365	1139.63727	0.9506	0.00036207	-1.992	-0.00075873	-1.0414	-0.00039666	380.8856156694533	50.441	0.91043	52.416	51.786	52.697	1.9753					90	29	4	0	0	0	0.86348	1	21200	21200		5.4027	2.9042	1	14245000			22050	7841	10926	10971	25263	25263					0.07303218185097649
MLRGQVPLV	9	Unmodified	_MLRGQVPLV_					0	0	0		nc|ENSG00000144712|O75155-2|CAND2;ENSG00000144712|ENST00000456430|CAND2	nc|ENSG00000144712|O75155-2|CAND2	nc|ENSG00000144712|O75155-2|CAND2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9835082888603	3	338.203917	1011.58992	0.17829	6.0298E-05	-3.6469	-0.0012334	-3.4686	-0.0011731	338.20211829550874	26.842	0.46169	28.589	28.495	28.957	1.747					24	14	3	0	0	0	0.11852	1	11260	11260		4.5289	1.5336	1	707200			22051	3090	10927	10972	25264	25264					0.08458983704758793
MLRRRYIL	8	Oxidation (M)	_M(Oxidation (M))LRRRYIL_		M(1)LRRRYIL		M(60)LRRRYIL	0	0	1			REV__nc|ENSG00000185664|P40967-3|PMEL	REV__nc|ENSG00000185664|P40967-3|PMEL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8408691287041	2	568.839685	1135.66482	1.8435	0.0010487	-1.2054	-0.0006857	0.63806	0.00036296	568.8387880369804	70.347	0.81341	72.184	71.719	72.532	1.8378					71	25	4	0	0	0	0.37329	1	29445	29445		59.795	8.9402	1	7255400	+		22052	11470	10928	10973	25265	25265		120			0.10241166235982746
MLRVRPFL	8	Unmodified	_MLRVRPFL_					0	0	0		ENST00000377921.7_1_10:16635262-16635307:-|nuORF	ENST00000377921.7_1_10:16635262-16635307:-|nuORF	ENST00000377921.7_1_10:16635262-16635307:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	516.7578613162041	2	516.312772	1030.61099	2.5849	0.0013346	1.7823	0.00092021	4.3672	0.0022548	516.3139447717246	89.58	0.12695	89.58	89.526	89.653	0					5	3	2	0	0	0	2.3239	1	37464	37464		2.8892	1.045	1	337330			22053	6201	10929	10974	25266	25266					0.09690993804292702
MLRVRPFL	8	Unmodified	_MLRVRPFL_					0	0	0		ENST00000377921.7_1_10:16635262-16635307:-|nuORF	ENST00000377921.7_1_10:16635262-16635307:-|nuORF	ENST00000377921.7_1_10:16635262-16635307:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3166381716728	2	516.312772	1030.61099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.74	1	70.593	70.093	71.093	1.853								0	0	0	1.0178	1	28840	28840		17.087	1.3183	1				22054	6201	10929	10974	25267	25267					0.09690993804292702
MLSDITNETL	10	Unmodified	_MLSDITNETL_					0	0	0		tr|A0A7D6VU68|A0A7D6VU68_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11340PE=4SV=1	tr|A0A7D6VU68|A0A7D6VU68_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11340PE=4SV=1	tr|A0A7D6VU68|A0A7D6VU68_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11340PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.8280517458916	2	568.778822	1135.54309	2.9678	0.001688	-0.63328	-0.00036019	2.3345	0.0013278	568.7787253492912	62.541	0.14657	63.954	63.899	64.045	1.4134					6	4	2	0	0	0	0.12461	1	26263	26263		10.074	0	1	706740			22055	16941	10930	10975	25268	25268					-0.019259654276993388
MLSPFISSV	9	Unmodified	_MLSPFISSV_					0	0	0		ENST00000492702.1_1_2:28117423-28117564:+|nuORF;ENST00000496951.1_1_2:28117423-28152780:+|nuORF;nc|ENSG00000158019|Q9NXR7-4|BABAM2;nc|ENSG00000158019|Q9NXR7-3|BABAM2;ENSG00000158019|ENST00000379624|BABAM2;nc|ENSG00000158019|Q9NXR7-1|BABAM2	ENST00000492702.1_1_2:28117423-28117564:+|nuORF	ENST00000492702.1_1_2:28117423-28117564:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	490.2929870486259	2	490.759704	979.504854	1.4885	0.0007305	0.30126	0.00014785	1.7898	0.00087835	490.7598991784582	69.141	0.27481	70.994	70.828	71.103	1.853					11	8	2	0	0	0	0.091909	1	28986	28986		20.454	1.0146	1	337990			22056	3488	10931	10976	25269	25269					0.01428193448316506
MLSVSSSTHF	10	Unmodified	_MLSVSSSTHF_					0	0	0		MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant;ENSG00000095015|ENST00000399503|MAP3K1	MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant	MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.2639037966728	2	548.260599	1094.50665	3.9055	0.0021412	1.1172	0.00061251	5.0227	0.0027537	548.2611309598944	92.193	0.48488	93.129	92.923	93.408	0.93623					38	14	4	0	0	0	0.51515	2	38860	38807;38860		26.884	8.7487	1	3703600			22057	1181	10932	10977	25270;25271	25271					-0.03682797533747362
MLSVSSSTHF	10	Unmodified	_MLSVSSSTHF_					0	0	0		MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant;ENSG00000095015|ENST00000399503|MAP3K1	MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant	MAP3K1|p.G1250Efs*23|1|0.04|ENSG00000095015|chr5:56883608-56883609|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.2629882693291	2	548.260599	1094.50665	3.2288	0.0017702	1.7678	0.0009692	4.9965	0.0027394	548.2614109772312	91.789	0.51299	93.116	92.828	93.341	1.3269					34	15	3	0	0	0	0.51515	1	38648	38648		26.884	2.2098	1	4235500			22058	1181	10932	10977	25272	25272					-0.03682797533747362
MLTDEGWII	9	Unmodified	_MLTDEGWII_					0	0	0			REV__ENSG00000172115|ENST00000305786|CYCS	REV__ENSG00000172115|ENST00000305786|CYCS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2704345583916	2	539.267893	1076.52123	2.7672	0.0014922	-1.6952	-0.00091416	1.072	0.00057808	539.2673835234544	64.132	1.2548	66.06	65.329	66.583	1.928					81	39	4	0	0	0	0.3154	1	26801	26801		24.674	1.5255	1	3700500	+		22059	11056	10933	10978	25273	25273					-0.013967253855980744
MLTLLSTGPQ	10	Unmodified	_MLTLLSTGPQ_					0	0	0			REV__ENST00000533277.5_1_11:66611269-66612734:+|nuORF	REV__ENST00000533277.5_1_11:66611269-66612734:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1061.579394519329	1	1060.57071	1059.56343	0.97177	0.0010306	0.32243	0.00034196	1.2942	0.0013726	1061.5730700093638	34.934	0.047039	36.209	36.185	36.233	1.2746					6	4	2	0	0	0	0.65574	1	14665	14665		20.454	3.5113	1	11194000	+		22060	11107	10934	10979	25274	25274					0.03603250022774773
MLTLSEQQEA	10	Unmodified	_MLTLSEQQEA_					0	0	0		SYDE1|p.K378M|1|0.6|ENSG00000105137|chr19:15110578-15110578|A/T|missense_variant	SYDE1|p.K378M|1|0.6|ENSG00000105137|chr19:15110578-15110578|A/T|missense_variant	SYDE1|p.K378M|1|0.6|ENSG00000105137|chr19:15110578-15110578|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2780029177666	2	575.276446	1148.53834	1.3533	0.00077852	1.5086	0.00086785	2.8619	0.0016464	575.2775761281276	77.211	0.5378	78.962	78.753	79.29	1.7514					26	16	2	0	0	0	0.77604	1	32364	32364		14.838	3.198	1	1906700			22061	16017	10935	10980	25275	25275					-0.02998849570440143
MLTVKVYIL	9	Unmodified	_MLTVKVYIL_					0	0	0			REV__ENSG00000097096|ENST00000341460|SYDE2	REV__ENSG00000097096|ENST00000341460|SYDE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3320800662041	2	540.330296	1078.64604	2.1501	0.0011618	1.0743	0.00058047	3.2244	0.0017423	540.3308373957354	69.207	1.3996	70.572	69.447	70.847	1.3657					105	45	3	0	0	0	0.75267	1	28858	28858		5.2307	0	1	3296600	+		22062	8941	10936	10981	25276	25276					0.10986191821598368
MLVLDDKLL	9	Unmodified	_MLVLDDKLL_					0	0	0			REV__ENSG00000116688|ENST00000235329|MFN2	REV__ENSG00000116688|ENST00000235329|MFN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3112060427666	2	530.309561	1058.60457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.471	1	89.917	89.417	90.417	1.4467								0	0	0	0.341	1	37285	37285		14.582	0	1		+		22063	9477	10937	10982	25277	25277					0.07761011062257239
MLVSTLKPSL	10	Unmodified	_MLVSTLKPSL_					0	0	0		ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.7386352419853	2	544.822835	1087.63112	3.1316	0.0017062	3.0427	0.0016577	6.1743	0.0033639	544.8244727213292	81.192	0.2776	82.888	82.766	83.043	1.6959					12	8	2	0	0	0	0.12438	1	34055	34055		11.64	3.047	1	589260			22064	5760	10938	10983	25278	25278					0.09080699953574367
MLVSTLKPSL	10	Unmodified	_MLVSTLKPSL_					0	0	0		ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	544.822835	1087.63112	2.2029	0.0012002	3.5692	0.0019446	5.7721	0.0031447	544.8244235386221	82.407	0.30675	82.687	82.52	82.827	0.2802	-0.037432	0.00016933	NaN	11.64	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1229600			22065	5760	10938	10983							0.09080699953574367
MLVSTLKPSL	10	Unmodified	_MLVSTLKPSL_					0	0	0		ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	ENST00000301204.7_1_19:42828913-42829189:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	544.822835	1087.63112	3.3579	0.0018295	4.137	0.0022539	7.4949	0.0040834	544.8241197125182	81.519	0.27795	82.752	82.626	82.904	1.2332	0.027737	0.00078804	NaN	11.64	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444180			22066	5760	10938	10983							0.09080699953574367
MLWDCLNHL	9	Unmodified	_MLWDCLNHL_					0	0	0			REV__ENST00000260810.9_1_3:133374204-133374288:-|nuORF	REV__ENST00000260810.9_1_3:133374204-133374288:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5126830935478	3	382.180783	1143.52052	-1.0001	-0.00038221	-3.2917	-0.001258	-4.2918	-0.0016402	382.17982197998634	24.608	1.2617	24.608	24.211	25.472	0					66	40	2	0	0	0	0.10346	1	10433	10433		21.537	5.3879	1	556490	+		22067	12179	10939	10984	25279	25279					-0.04549843306290313
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1576	1	2.1576	1.6576	2.6576	0								0	0	0	0.63775	1	885	885		0	0	1		+		22068	12992	10940	10985	25280	25280					0.011439111895469978
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3998	1	2.3998	1.8998	2.8998	0								0	0	0	0.63775	1	984	984		0	0	1		+		22069	12992	10940	10985	25281	25281					0.011439111895469978
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885681033134	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4999	1	2.4999	1.9999	2.9999	0								0	0	0	0.63775	1	1025	1025		0	0	1		+		22070	12992	10940	10985	25282	25282					0.011439111895469978
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7538	1	2.7538	2.2538	3.2538	0								0	0	0	0.63775	1	1129	1129		0	0	1		+		22071	12992	10940	10985	25283	25283					0.011439111895469978
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9574	1	2.9574	2.4574	3.4574	0								0	0	0	0.63775	1	1212	1212		0	0	1		+		22072	12992	10940	10985	25284	25284					0.011439111895469978
MLWPLCRGMLA	11	Unmodified	_MLWPLCRGMLA_					0	0	0			REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	REV__ENST00000425141.5_1_2:220498093-220506447:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0552	1	3.0552	2.5552	3.5552	0								0	0	0	0.63775	1	1253	1253		0	0	1		+		22073	12992	10940	10985	25285	25285					0.011439111895469978
MMGGESAD	8	Unmodified	_MMGGESAD_					0	0	0		nc|ENSG00000171604|Q7LFL8-2|CXXC5;ENSG00000171604|ENST00000302517|CXXC5	nc|ENSG00000171604|Q7LFL8-2|CXXC5	nc|ENSG00000171604|Q7LFL8-2|CXXC5	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2523681521416	2	399.143846	796.27314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.66	1	100.86	100.36	101.36	0.20527								0	0	0	1.0178	1	42328	42328		0.79363	0	1				22074	4200	10941	10986	25286	25286					-0.1331459724490287
MMIPVIIPV	9	Unmodified	_MMIPVIIPV_					0	0	0			REV__AP3B1|p.N759Ifs*2|1|0.12|ENSG00000132842|chr5:78110321-78110328|TTTTTCAT/-|frameshift_variant	REV__AP3B1|p.N759Ifs*2|1|0.12|ENSG00000132842|chr5:78110321-78110328|TTTTTCAT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9830505251884	3	338.202637	1011.58608	0.20225	6.8402E-05	1.1233	0.0003799	1.3256	0.0004483	338.5380587107727	27.521	0.43151	29.296	29.078	29.51	1.7754					20	13	2	0	0	0	0.11891	1	11600	11600		1.1933	0.12188	1	343250	+		22075	8129	10942	10987	25287	25287					0.08075177886701113
MMLDDLLQL	9	Unmodified	_MMLDDLLQL_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2803832888603	2	546.277403	1090.54025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.691	1	96.093	95.593	96.593	0.40208								0	0	0	0.049897	1	40262	40262		44.407	31.875	1				22076	2678	10943	10988	25288	25288					-0.0013951208618436794
MMTAYYEYFDR	11	Unmodified	_MMTAYYEYFDR_					0	0	0			REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	745.3102905154228	2	745.309963	1488.60537	0.57734	0.0004303	-0.99015	-0.00073797	-0.41282	-0.00030768	745.3093495493537	10.075	0.46155	10.075	9.6898	10.151	0					24	14	2	0	0	0	0.93654	1	4157	4157		7.609	0.97858	1	1414000	+		22077	15815	10944	10989	25289	25289					-0.11938562351019755
MMTAYYEYFDR	11	Unmodified	_MMTAYYEYFDR_					0	0	0			REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	745.309963	1488.60537	0.57734	0.0004303	-0.99015	-0.00073797	-0.41282	-0.00030768	745.3093495493537	10.075	0.46155	10.075	9.6898	10.151	0	-0.013555	-0.00068588	NaN	7.609	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1414000	+		22078	15815	10944	10989							-0.11938562351019755
MMTAYYEYFDR	11	Unmodified	_MMTAYYEYFDR_					0	0	0			REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	REV__tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	745.309963	1488.60537	0.10125	7.5464E-05	0.1963	0.0001463	0.29755	0.00022177	745.3102360162413	10.024	0.41368	10.102	9.7163	10.13	0.077971	0.013555	0.0010827	NaN	7.609	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785850	+		22079	15815	10944	10989							-0.11938562351019755
MMVKPCGG	8	Unmodified	_MMVKPCGG_					0	0	0		GPC3|p.G267E|1|0.66|ENSG00000147257|chrX:133753714-133753714|C/T|missense_variant;nc|ENSG00000147257|P51654-2|GPC3;ENSG00000147257|ENST00000370818|GPC3;nc|ENSG00000147257|P51654-3|GPC3	GPC3|p.G267E|1|0.66|ENSG00000147257|chrX:133753714-133753714|C/T|missense_variant	GPC3|p.G267E|1|0.66|ENSG00000147257|chrX:133753714-133753714|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	822.3707153201103	1	822.367063	821.359787	2.7683	0.0022765	1.5531	0.0012772	4.3213	0.0035537	822.3680192719927	103.61	0.1178	103.67	103.6	103.72	0.059502					16	5	4	0	0	0	0.89176	1	43493	43493		0.79363	0.10326	1	253510000			22080	3180	10945	10990	25290	25290					-0.05803889224023351
MMYSIFHL	8	Unmodified	_MMYSIFHL_					0	0	0		ENST00000366784.1_1_1:226895440-226895602:-|nuORF	ENST00000366784.1_1_1:226895440-226895602:-|nuORF	ENST00000366784.1_1_1:226895440-226895602:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	347.2001525759697	3	347.834725	1040.48234	2.9161	0.0010143	0.78489	0.00027301	3.701	0.0012873	347.8357346614743	60.532	0.4399	62.497	62.167	62.607	1.9653					20	13	2	0	0	0	2.3239	1	25275	25275		1.8442	0	1	654860			22081	6051	10946	10991	25291	25291					-0.03627729220966103
MNEENMTELL	10	Unmodified	_MNEENMTELL_					0	0	0		ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF	ENSG00000128585|ENST00000352689|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.2706176638603	2	612.267764	1222.52097	1.8539	0.0011351	2.2386	0.0013706	4.0925	0.0025057	612.2687937942421	71.749	1.5438	73.09	72.601	74.144	1.3415					151	49	5	0	0	0	0.81324	1	30076	30076		10.824	0	1	4934000			22082	2373	10947	10992	25292	25292					-0.08138513167750716
MNPQKVKPPE	10	Unmodified	_MNPQKVKPPE_					0	0	0		ABCC9|p.D1415Gfs*2|1|0.26|ENSG00000069431|chr12:21809923-21809924|-/C|frameshift_variant;nc|ENSG00000069431|O60706|ABCC9;ENSG00000069431|ENST00000261200|ABCC9	ABCC9|p.D1415Gfs*2|1|0.26|ENSG00000069431|chr12:21809923-21809924|-/C|frameshift_variant	ABCC9|p.D1415Gfs*2|1|0.26|ENSG00000069431|chr12:21809923-21809924|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.8174316287041	2	584.313166	1166.61178	1.9542	0.0011419	2.7489	0.0016062	4.7032	0.0027481	584.314649705529	55.324	0.24839	55.324	55.184	55.433	0					19	11	2	0	0	0	0.86043	1	23070	23070		5.7319	0	1	2467600			22083	9	10948	10993	25293	25293					0.03513743662665547
MNPTISIKAL	10	Unmodified	_MNPTISIKAL_					0	0	0			REV__tr|A0A7D6ZUI3|A0A7D6ZUI3_9CLOTAntirepressorproteinantN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12005PE=4SV=1	REV__tr|A0A7D6ZUI3|A0A7D6ZUI3_9CLOTAntirepressorproteinantN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12005PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3129760622978	2	544.312635	1086.61072	1.9703	0.0010724	-1.6182	-0.00088082	0.35204	0.00019162	544.3115248216285	83.453	0.44158	84.641	84.326	84.767	1.1879					30	13	3	0	0	0	0.40874	1	35015	35015		32.786	4.2988	1	5236800	+		22084	15721	10949	10994	25294	25294					0.07087529293767147
MNYWQGWK	8	Unmodified	_MNYWQGWK_					0	0	0		ENSG00000151033|ENST00000647634|LYZL2;ENSG00000120563|ENST00000649382|LYZL1;nc|ENSG00000151033|Q7Z4W2-2|LYZL2;nc|ENSG00000120563|Q6UWQ5-2|LYZL1	ENSG00000151033|ENST00000647634|LYZL2	ENSG00000151033|ENST00000647634|LYZL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1015807986259	3	371.504255	1111.49094	-1.8461	-0.00068582	-1.9538	-0.00072583	-3.7998	-0.0014117	371.5035744626009	12.853	0.36784	12.853	12.685	13.052	0					15	11	2	0	0	0	2.3239	1	5323	5323		0	0	1	1584700			22085	2110	10950	10995	25295	25295					-0.0603503926013218
MPATLALAP	9	Unmodified	_MPATLALAP_					0	0	0		ENST00000494911.5_1_11:32459635-32459764:+|nuORF	ENST00000494911.5_1_11:32459635-32459764:+|nuORF	ENST00000494911.5_1_11:32459635-32459764:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.7498657107353	2	442.749139	883.483725	1.4255	0.00063114	1.0133	0.00044863	2.4388	0.0010798	442.7494557153641	55.415	0.29063	56.825	56.647	56.937	1.4099					17	9	2	0	0	0	0.24063	1	23229	23229		28.487	5.3384	1	1810600			22086	6939	10951	10996	25296	25296					0.03732228139438121
MPATLALAP	9	Unmodified	_MPATLALAP_					0	0	0		ENST00000494911.5_1_11:32459635-32459764:+|nuORF	ENST00000494911.5_1_11:32459635-32459764:+|nuORF	ENST00000494911.5_1_11:32459635-32459764:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	442.749139	883.483725	0.91472	0.00040499	0.79813	0.00035337	1.7129	0.00075836	442.74939497704986	54.893	0.29451	56.861	56.722	57.017	1.9684	0.017987	-0.00010218	NaN	28.487	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1739700			22087	6939	10951	10996							0.03732228139438121
MPDDLLTTL	9	Unmodified	_MPDDLLTTL_					0	0	0		ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1018.50987547636	1	1018.51252	1017.50525	2.7728	0.0028242	-0.71079	-0.00072395	2.0621	0.0021002	1018.5122712185137	72.846	0.43696	74.176	73.913	74.35	1.3298					38	13	4	0	0	0	0.026628	3	30509	30509;30553;30609		92.822	18.399	1	6862600			22088	2362	10952	10997	25297;25298;25299	25297					-0.002804316225024195
MPDDLLTTL	9	Unmodified	_MPDDLLTTL_					0	0	0		ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7621032595634	2	509.759901	1017.50525	3.7565	0.0019149	-0.96418	-0.0004915	2.7924	0.0014234	509.75962387686377	72.846	0.52892	74.176	73.852	74.381	1.3297					52	16	5	0	0	0	0.051699	2	30590	30551;30590		67.344	9.8725	1	15706000			22089	2362	10952	10997	25300;25301	25301					-0.002804316225024195
MPDDLLTTL	9	Unmodified	_MPDDLLTTL_					0	0	0		ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7611572146416	2	509.759901	1017.50525	2.9609	0.0015094	-0.64516	-0.00032888	2.3158	0.0011805	509.75974216342263	72.346	0.43176	74.156	73.921	74.353	1.8101					42	13	4	0	0	0	0.03795	2	30355	30316;30355		77.984	29.638	1	13389000			22090	2362	10952	10997	25302;25303	25303					-0.002804316225024195
MPDDLLTTL	9	Unmodified	_MPDDLLTTL_					0	0	0		ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	ENSG00000128272|ENST00000674920|ATF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1018.514636218548	1	1018.51252	1017.50525	2.6303	0.0026789	0.1305	0.00013291	2.7608	0.0028119	1018.5125023045938	72.311	0.40121	74.121	73.952	74.353	1.8101					29	12	3	0	0	0	0.031324	2	30333	30333;30382		85.357	27.885	1	9240000			22091	2362	10952	10997	25304;25305	25304					-0.002804316225024195
MPDGQFKDISL	11	Unmodified	_MPDGQFKDISL_					0	0	0		ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.8088256716728	2	625.807913	1249.60127	2.0182	0.001263	-0.99223	-0.00062095	1.026	0.00064206	625.8074163784443	49.74	0.69069	51.132	50.857	51.548	1.3911					65	21	4	0	0	0	0.013627	5	20846	20760;20808;20846;20885;20934		103.69	67.617	1	8288500			22092	2010	10953	10998	25306;25307;25308;25309;25310	25308					-0.01354283782393395
MPDGQFKDISL	11	Unmodified	_MPDGQFKDISL_					0	0	0		ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	ENSG00000117450|ENST00000319248|PRDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.8091308474541	2	625.807913	1249.60127	1.2112	0.00075801	-0.22609	-0.00014149	0.98516	0.00061652	625.80795158845	49.208	0.65099	51.185	50.886	51.537	1.9772					65	20	4	0	0	0	0.0024313	5	20573	20527;20573;20613;20653;20713		118.81	80.637	1	6722000			22093	2010	10953	10998	25311;25312;25313;25314;25315	25312					-0.01354283782393395
MPDHVIPEI	9	Unmodified	_MPDHVIPEI_					0	0	0		nc|ENSG00000108406|Q8IX18-4|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;ENSG00000108406|ENST00000251241|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7675048708916	2	525.76806	1049.52157	2.4616	0.0012942	-2.6503	-0.0013935	-0.18871	-9.9216E-05	525.7670679913388	47.895	0.58522	49.871	49.435	50.021	1.976					26	18	2	0	0	0	0.20671	1	20060	20060		32.305	3.8186	1	1140400			22094	1634	10954	10999	25316	25316					-0.001213056657661582
MPDIIIKAL	9	Unmodified	_MPDIIIKAL_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000463808.1_1_16:2122597-2124590:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3094055056572	2	507.306821	1012.59909	3.4611	0.0017558	0.75805	0.00038456	4.2192	0.0021404	507.3071628168042	64.5	0.61233	65.907	65.497	66.109	1.4071					41	19	3	0	0	0	0.070055	2	27049	27049;27100		60.074	34.675	1	4001700			22095	1421	10955	11000	25317;25318	25317					0.09329332270431223
MPDIIIKAL	9	Unmodified	_MPDIIIKAL_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000463808.1_1_16:2122597-2124590:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3084899783134	2	507.306821	1012.59909	2.9416	0.0014923	1.09	0.00055299	4.0317	0.0020453	507.3073213847677	63.979	0.65102	65.907	65.457	66.108	1.928					42	20	3	0	0	0	0.060242	2	26835	26835;26889		63.961	37.986	1	3198600			22096	1421	10955	11000	25319;25320	25319					0.09329332270431223
MPDLPQDKP	9	Unmodified	_MPDLPQDKP_					0	0	0		ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	ENSG00000151461|ENST00000357604|UPF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	348.2012817263603	3	347.507554	1039.50083	1.6526	0.00057431	-3.5756	-0.0012426	-1.923	-0.00066825	347.5060298740065	81.37	0.29814	81.661	81.493	81.791	0.29056					16	9	2	0	0	0	0.11938	1	33951	33951		0.26902	0	1	1105100			22097	3288	10956	11001	25321	25321					-0.017338960454253538
MPDLSLSFM	9	Unmodified	_MPDLSLSFM_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENST00000480373.1_1_10:75888732-75889691:-|nuORF	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7418701052666	2	520.743196	1039.47184	1.5727	0.00081897	-1.417	-0.00073788	0.15573	8.1094E-05	520.742927358003	83.846	0.43923	85.033	84.767	85.207	1.1879					33	13	3	0	0	0	0.10294	1	35120	35120		48.346	0	1	3642000			22098	4724	10957	11002	25322	25322					-0.04631756666049114
MPDVDFNL	8	Unmodified	_MPDVDFNL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	950.4303466677666	1	950.428795	949.421518	1.2304	0.0011695	0.74514	0.0007082	1.9756	0.0018777	950.428766698977	66.886	0.56032	68.274	67.996	68.557	1.3888					27	17	2	0	0	0	0.49046	1	28026	28026		48.346	18.121	1	968350			22099	30	10958	11003	25323	25323					-0.055215429995541854
MPDVDFNL	8	Unmodified	_MPDVDFNL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	950.4332763552666	1	950.428795	949.421518	1.8587	0.0017666	-0.8322	-0.00079095	1.0265	0.00097563	950.4292655090424	66.439	0.3796	68.328	68.088	68.467	1.8889					22	11	3	0	0	0	0.5808	1	27853	27853		42.095	21.641	1	913390			22100	30	10958	11003	25324	25324					-0.055215429995541854
MPDVDLHL	8	Unmodified	_MPDVDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.2336913943291	2	470.233853	938.453153	1.2204	0.00057388	0.31024	0.00014588	1.5307	0.00071977	470.2338960080807	52.393	0.46885	53.789	53.554	54.023	1.3966					27	14	2	0	0	0	0.35773	2	21926	21879;21926		63.563	42.692	1	3421700			22101	30	10959	11004	25325;25326	25326					-0.018535502456074937
MPDVDLHL	8	Unmodified	_MPDVDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK;AHNAK|p.D1995Tfs*4|1|0.03|ENSG00000124942|chr11:62528434-62528434|C/-|frameshift_variant;AHNAK|p.D1993Efs*18|1|0.26|ENSG00000124942|chr11:62528419-62528438|CTTTCAGGTGTAAGTCCACA/-|frameshift_variant;AHNAK|p.K2299Sfs*23|1|0.04|ENSG00000124942|chr11:62527523-62527523|G/-|frameshift_variant;AHNAK|p.P895Cfs*7|1|0.12|ENSG00000124942|chr11:62531725-62531735|CCACTTCTGGG/-|frameshift_variant;AHNAK|p.M1129Ffs*25|1|0.05|ENSG00000124942|chr11:62531032-62531033|-/TAAA|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2355834841728	2	470.233853	938.453153	1.4526	0.00068306	0.3772	0.00017737	1.8298	0.00086043	470.2339742816014	51.842	0.58862	53.815	53.52	54.109	1.9722					31	18	2	0	0	0	0.37084	3	21677	21677;21727;21772		60.39	40.951	1	2802100			22102	30	10959	11004	25327;25328;25329	25327					-0.018535502456074937
MPDVVVRSF	9	Unmodified	_MPDVVVRSF_					0	0	0		ENST00000514280.1_1_5:79646842-79647379:-|nuORF;nc|ENSG00000160563|Q6P2C8-2|MED27;ENSG00000160563|ENST00000292035|MED27	ENST00000514280.1_1_5:79646842-79647379:-|nuORF	ENST00000514280.1_1_5:79646842-79647379:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2764160037041	2	525.276052	1048.53755	2.6598	0.0013971	0.17194	9.0315E-05	2.8317	0.0014874	525.275168308523	44.656	0.31342	46.022	45.836	46.149	1.3653					20	9	3	0	0	0	0.26473	1	18711	18711		27.223	12.385	1	1327500			22103	3564	10960	11005	25330	25330					0.015224005711615973
MPEGLTPLATL	11	Unmodified	_MPEGLTPLATL_					0	0	0		ENST00000566346.2_1_16:33401403-33412789:+|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1;ENSG00000131941|ENST00000254260|RHPN2;RHPN2-GRIN2D|1|fusion	ENST00000566346.2_1_16:33401403-33412789:+|nuORF	ENST00000566346.2_1_16:33401403-33412789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8120605349541	2	571.809925	1141.6053	3.0683	0.0017545	-2.4718	-0.0014134	0.59642	0.00034104	571.8100100603762	74.88	0.40746	76.186	75.967	76.374	1.3063					29	12	3	0	0	0	0.027444	1	31439	31439		85.642	17.561	1	4241700			22104	2508	10961	11006	25331	25331					0.040158057113103496
MPEGLTPLATL	11	Unmodified	_MPEGLTPLATL_					0	0	0		ENST00000566346.2_1_16:33401403-33412789:+|nuORF;nc|ENSG00000131941|Q8IUC4-2|RHPN2;nc|ENSG00000258628|A8MT19|RHPN2P1;ENSG00000131941|ENST00000254260|RHPN2;RHPN2-GRIN2D|1|fusion	ENST00000566346.2_1_16:33401403-33412789:+|nuORF	ENST00000566346.2_1_16:33401403-33412789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8107787966728	2	571.809925	1141.6053	2.9536	0.0016889	-3.8218	-0.0021854	-0.86827	-0.00049648	572.3085968423585	74.445	0.4137	76.242	76.021	76.434	1.7962					34	12	4	0	0	0	0.031246	1	31243	31243		78.728	20.049	1	2645600			22105	2508	10961	11006	25332	25332					0.040158057113103496
MPEKEPSVL	9	Unmodified	_MPEKEPSVL_					0	0	0		ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;MMS19|p.M948*|1|0.08|ENSG00000155229|chr10:97459424-97459424|T/-|frameshift_variant;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2690307497978	2	515.267893	1028.52123	1.5899	0.0008192	1.6577	0.00085417	3.2476	0.0016734	515.2688313644304	25.079	0.33062	26.338	26.227	26.558	1.2594					14	10	2	0	0	0	0.66458	1	10517	10517		8.7454	1.4562	1	372320			22106	6946	10962	11007	25333	25333					0.00811274614420654
MPEKEPSVL	9	Unmodified	_MPEKEPSVL_					0	0	0		ENST00000495415.5_1_10:99221527-99223714:-|nuORF;nc|ENSG00000155229|Q96T76-5|MMS19;MMS19|p.M948*|1|0.08|ENSG00000155229|chr10:97459424-97459424|T/-|frameshift_variant;nc|ENSG00000155229|Q96T76-9|MMS19;ENSG00000155229|ENST00000438925|MMS19;nc|ENSG00000155229|Q96T76-8|MMS19	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2680541872978	2	515.267893	1028.52123	0.87005	0.00044831	0.57225	0.00029486	1.4423	0.00074317	515.2686525217742	24.801	0.33581	26.486	26.298	26.634	1.6845					13	10	2	0	0	0	0.71526	1	10327	10327		6.7232	1.4925	1	354690			22107	6946	10962	11007	25334	25334					0.00811274614420654
MPEPTVLSL	9	Oxidation (M)	_M(Oxidation (M))PEPTVLSL_		M(1)PEPTVLSL		M(51)PEPTVLSL	0	0	1		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.7655517458916	2	501.762443	1001.51033	1.503	0.00075416	1.8563	0.0009314	3.3593	0.0016856	501.7634309727081	57.101	0.38869	58.516	58.307	58.696	1.4145					18	12	2	0	0	0	0.09539	2	23926	23926;23974		50.855	22.368	1	1661400			22108	4959	10963	11008	25335;25336	25335		84			0.009638722401291488
MPEPTVLSL	9	Oxidation (M)	_M(Oxidation (M))PEPTVLSL_		M(1)PEPTVLSL		M(42)PEPTVLSL	0	0	1		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7633849978447	2	501.762443	1001.51033	0.63912	0.00032069	2.0134	0.0010102	2.6525	0.0013309	501.7634907261626	56.622	0.26749	58.59	58.425	58.693	1.9684					15	8	2	0	0	0	0.12174	1	23720	23720		42.095	11.458	1	1762600			22109	4959	10963	11008	25337	25337		84			0.009638722401291488
MPEPTVLSL	9	Unmodified	_MPEPTVLSL_					0	0	0		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5252563357353	1	986.522695	985.515419	2.9516	0.0029118	-0.31977	-0.00031546	2.6318	0.0025963	986.5228410701801	66.765	0.43962	68.154	67.903	68.343	1.3887					32	13	4	0	0	0	0.036104	3	27992	27946;27992;28044		100.37	42.9	1	5008200			22110	4959	10963	11009	25338;25339;25340	25339					0.022081761027379798
MPEPTVLSL	9	Unmodified	_MPEPTVLSL_					0	0	0		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7655517458916	2	493.764986	985.515419	1.8405	0.00090879	-1.2511	-0.00061773	0.58946	0.00029105	493.76461160275176	66.743	0.46921	68.132	67.874	68.343	1.3888					42	14	4	0	0	0	0.053939	2	28002	27956;28002		85.357	22.368	1	10138000			22111	4959	10963	11009	25341;25342	25342					0.022081761027379798
MPEPTVLSL	9	Unmodified	_MPEPTVLSL_					0	0	0		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.5248901247978	1	986.522695	985.515419	2.0713	0.0020434	0.039329	3.8799E-05	2.1106	0.0020822	986.5228370321494	66.244	0.37894	68.133	67.962	68.341	1.8889					31	11	4	0	0	0	0.040497	2	27823	27770;27823		97.075	41.967	1	6759100			22112	4959	10963	11009	25343;25344	25344					0.022081761027379798
MPEPTVLSL	9	Unmodified	_MPEPTVLSL_					0	0	0		ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	ENSG00000196683|ENST00000358435|TOMM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7652160525322	2	493.764986	985.515419	1.7708	0.00087437	-1.8349	-0.00090602	-0.064116	-3.1658E-05	493.7644780203351	66.279	0.47292	68.168	67.931	68.404	1.8889					41	14	4	0	0	0	0.053939	1	27822	27822		85.357	24.967	1	6490500			22113	4959	10963	11009	25345	25345					0.022081761027379798
MPEQIVIHAL	10	Unmodified	_MPEQIVIHAL_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8200561404228	2	575.818084	1149.62162	0.6332	0.00036461	2.5154	0.0014484	3.1486	0.001813	575.8192107613885	53.057	0.38436	54.457	54.281	54.665	1.4005					34	11	4	0	0	0	0.06693	2	22210	22210;22247		110.55	77.767	1	7672800			22114	1372	10964	11010	25346;25347	25346					0.05278931668067344
MPEQIVIHAL	10	Unmodified	_MPEQIVIHAL_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8197509646416	2	575.818084	1149.62162	1.1625	0.00066938	1.2859	0.00074043	2.4483	0.0014098	575.8185733547049	52.49	0.38496	54.462	54.289	54.674	1.9722					32	11	4	0	0	0	0.05462	3	22050	21963;22008;22050		110.55	81.471	1	7912300			22115	1372	10964	11010	25348;25349;25350	25350					0.05278931668067344
MPEVSVLVL	9	Unmodified	_MPEVSVLVL_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7843200564384	2	493.783179	985.551804	1.4134	0.00069793	1.5139	0.00074754	2.9273	0.0014455	493.78358186024514	79.836	0.34265	81.552	81.383	81.726	1.7167					16	10	2	0	0	0	0.09539	1	33481	33481		50.855	14.811	1	1312400			22116	669	10965	11011	25351	25351					0.05845052999438849
MPFAPAIQTF	10	Unmodified	_MPFAPAIQTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7850219607353	2	561.786253	1121.55795	2.5445	0.0014295	-1.2037	-0.00067621	1.3409	0.00075328	561.7863409669984	76.145	0.44945	77.439	77.19	77.639	1.2938					32	14	3	0	0	0	0.3543	1	31965	31965		36.044	9.7029	1	1755100			22117	4605	10966	11012	25352	25352					0.002035712309407245
MPFAPAIQTF	10	Unmodified	_MPFAPAIQTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.7861816287041	2	561.786253	1121.55795	2.7279	0.0015325	-1.3478	-0.00075718	1.3801	0.00077534	561.7863317016407	75.596	0.44536	77.377	77.166	77.611	1.7817					35	14	3	0	0	0	0.23727	1	31740	31740		44.407	13.77	1	1941000			22118	4605	10966	11012	25353	25353					0.002035712309407245
MPFHWKQEEL	10	Unmodified	_MPFHWKQEEL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;ENST00000555641.1_1_12:57499966-57502061:-|nuORF	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.8858520388603	3	448.885024	1343.63324	1.7526	0.00078672	0.15032	6.7474E-05	1.9029	0.0008542	448.88514436798334	39.384	0.43014	41.221	41.007	41.437	1.8366					33	13	3	0	0	0	0.88031	1	16567	16567		3.5871	0.5148	1	2547700			22119	3930	10967	11013	25354	25354					-0.024828713085753407
MPFNLMKFIR	10	Unmodified	_MPFNLMKFIR_					0	0	0		ENSG00000172215|ENST00000304552|CXCR6	ENSG00000172215|ENST00000304552|CXCR6	ENSG00000172215|ENST00000304552|CXCR6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	325.2931396365166	4	324.92934	1295.68826	-2.5911	-0.00084194	-0.31932	-0.00010376	-2.9105	-0.00094569	324.92806296415296	111.54	0.1872	111.54	111.47	111.66	0					8	5	2	0	0	0	0.12561	1	48251	48251		0.15932	0	1	115120			22120	4230	10968	11014	25355	25355					0.05223843958310681
MPFSPYEPL	9	Unmodified	_MPFSPYEPL_					0	0	0		nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU;nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-3|CLU	nc|ENSG00000120885|P10909-3|CLU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1080.507861316204	1	1080.50705	1079.49977	1.8878	0.0020398	0.74325	0.00080308	2.631	0.0028429	1080.5062944485232	67.58	0.42875	68.957	68.724	69.153	1.3778					29	13	3	0	0	0	0.031324	2	28323	28323;28403		85.357	62.208	1	2256200			22121	2121	10969	11015	25356;25357	25356					-0.036801104143250996
MPFSPYEPL	9	Unmodified	_MPFSPYEPL_					0	0	0		nc|ENSG00000120885|P10909-3|CLU;nc|ENSG00000120885|P10909-4|CLU;ENST00000522299.5_1_8:27457218-27472184:-|nuORF;nc|ENSG00000120885|P10909-6|CLU;ENSG00000120885|ENST00000316403|CLU;nc|ENSG00000120885|P10909-5|CLU;nc|ENSG00000120885|P10909-2|CLU	nc|ENSG00000120885|P10909-3|CLU	nc|ENSG00000120885|P10909-3|CLU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1080.507617175579	1	1080.50705	1079.49977	1.5219	0.0016445	-1.2185	-0.0013166	0.30343	0.00032786	1080.5055929848677	67.064	0.43302	68.953	68.733	69.166	1.8889					25	13	2	0	0	0	0.013238	1	28112	28112		104.8	70.397	1	2100100			22122	2121	10969	11015	25358	25358					-0.036801104143250996
MPGFLVRIL	9	Unmodified	_MPGFLVRIL_					0	0	0		ENST00000440656.1_1_3:33110441-33138613:-|nuORF;ENST00000485698.5_1_3:33095017-33138613:-|nuORF;nc|ENSG00000170266|P16278-2|GLB1;nc|ENSG00000170266|P16278|GLB1;ENSG00000170266|ENST00000307363|GLB1	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	ENST00000440656.1_1_3:33110441-33138613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3182861208916	2	523.31498	1044.61541	2.6208	0.0013715	0.11535	6.0367E-05	2.7362	0.0014319	523.3160144607136	76.472	0.31873	78.239	78.003	78.321	1.7672					22	9	3	0	0	0	0.076627	2	32085	32038;32085		57.471	31.13	1	3192900			22123	4135	10970	11016	25359;25360	25360					0.0948845822720159
MPHDLITQL	9	Unmodified	_MPHDLITQL_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2814819216728	2	534.281334	1066.54812	2.1694	0.0011591	-3.1394	-0.0016773	-0.96992	-0.00051821	534.2797893536934	47.899	0.56055	49.282	48.986	49.547	1.3825					35	17	3	0	0	0	0.073578	2	20030	20030;20083		58.679	20.503	1	3580900			22124	2446	10971	11017	25361;25362	25361					0.017503832255897578
MPHDLITQL	9	Unmodified	_MPHDLITQL_					0	0	0		nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2;ENSG00000130640|ENST00000252936|TUBGCP2;nc|ENSG00000130640|Q9BSJ2-4|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	nc|ENSG00000130640|Q9BSJ2-3|TUBGCP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	534.281334	1066.54812	2.7177	0.001452	-7.4066	-0.0039572	-4.6889	-0.0025052	534.2772383003182	47.383	0.99456	49.359	48.592	49.587	1.976	0.038625	-0.0034509	NaN	58.679	71	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4644300			22125	2446	10971	11017							0.017503832255897578
MPHVPITTL	9	Unmodified	_MPHVPITTL_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL;nc|ENSG00000164190|Q6KC79-3|NIPBL;NIPBL|p.D1127Vfs*46|1|0.16|ENSG00000164190|chr5:37000448-37000448|A/-|frameshift_variant	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7812377810478	2	504.78097	1007.54739	1.7113	0.00086383	-2.869	-0.0014482	-1.1577	-0.00058436	504.7814501660527	48.918	0.40483	50.306	50.14	50.544	1.388					25	12	3	0	0	0	0.3154	1	20502	20502		24.674	7.561	1	1646900			22126	3759	10972	11018	25363	25363					0.04391588576527283
MPILLFPK	8	Unmodified	_MPILLFPK_					0	0	0			REV__nc|ENSG00000180259|Q86SH4|PRNT	REV__nc|ENSG00000180259|Q86SH4|PRNT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.7946044802666	2	479.793349	957.572146	3.1858	0.0015285	-1.294	-0.00062086	1.8918	0.00090767	479.79258500155885	75.659	1.2408	75.981	75.55	76.791	0.32163					82	39	3	0	0	0	0.89176	1	31658	31658		0.79363	0	1	3050500	+		22127	14497	10973	11019	25364	25364					0.09166268449905601
MPILLKSMI	9	Unmodified	_MPILLKSMI_					0	0	0			REV__tr|A0A553SRY2|A0A553SRY2_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_01930PE=4SV=1	REV__tr|A0A553SRY2|A0A553SRY2_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_01930PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3171874880791	2	523.311049	1044.60755	2.6533	0.0013885	2.239	0.0011717	4.8922	0.0025602	523.3131500599106	77.008	0.41338	78.289	78.094	78.507	1.2809					41	12	5	0	0	0	0.42305	1	32362	32362		19.257	1.122	1	3063600	+		22128	15179	10974	11020	25365	25365					0.08702562915414092
MPIQVLKGL	9	Unmodified	_MPIQVLKGL_					0	0	0		ENST00000345523.8_1_19:51302584-51305485:-|nuORF	ENST00000345523.8_1_19:51302584-51305485:-|nuORF	ENST00000345523.8_1_19:51302584-51305485:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8077880740166	2	499.806988	997.599423	1.266	0.00063275	0.88818	0.00044392	2.1542	0.0010767	499.8072733379837	56.611	0.27555	58.025	57.877	58.153	1.4145					12	8	2	0	0	0	0.045797	1	23745	23745		71.134	13.662	1	1693500			22129	5963	10975	11021	25366	25366					0.100527519903153
MPIQVLKGL	9	Unmodified	_MPIQVLKGL_					0	0	0		ENST00000345523.8_1_19:51302584-51305485:-|nuORF	ENST00000345523.8_1_19:51302584-51305485:-|nuORF	ENST00000345523.8_1_19:51302584-51305485:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.8079406619072	2	499.806988	997.599423	0.90062	0.00045014	-0.80267	-0.00040118	0.097951	4.8957E-05	499.8063876759172	56.02	0.2462	57.988	57.841	58.087	1.9684					11	7	2	0	0	0	0.042029	1	23514	23514		74.423	17.881	1	976640			22130	5963	10975	11021	25367	25367					0.100527519903153
MPIRDLDTF	9	Unmodified	_MPIRDLDTF_					0	0	0		tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	553.7884399294853	2	554.278792	1106.54303	3.518	0.00195	0.32886	0.00018228	3.8469	0.0021322	554.2793968414674	90.961	0.093422	92.327	92.249	92.342	1.366					4	2	2	0	0	0	0.116	1	38283	38283		9.3474	0	1	497790			22131	16259	10976	11022	25368	25368					-0.005979206370511747
MPIVLELIP	9	Oxidation (M)	_M(Oxidation (M))PIVLELIP_		M(1)PIVLELIP		M(50)PIVLELIP	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2;ENST00000427426.1_1_1:568752-568815:+|nuORF	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.8093749880791	2	520.806654	1039.59875	5.9592	0.0031036	-0.9668	-0.00050352	4.9924	0.0026001	520.8061960974296	88.759	1.1264	89.815	89.113	90.239	1.0562					59	34	2	0	0	0	0.098957	2	37312	37273;37312		49.669	17.3	1	5773900			22132	5070	10977	11023	25369;25370	25370		89			0.0805391255057657
MPIVLELIP	9	Oxidation (M)	_M(Oxidation (M))PIVLELIP_		M(1)PIVLELIP		M(57)PIVLELIP	0	0	1		ENSG00000198712|ENST00000361739|MT-CO2;ENST00000427426.1_1_1:568752-568815:+|nuORF	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.8098632693291	2	520.806654	1039.59875	4.6756	0.0024351	0.51831	0.00026994	5.1939	0.002705	520.8069967714154	88.301	1.0529	89.747	89.093	90.146	1.4467					56	32	2	0	0	0	0.078975	1	37126	37126		56.541	12.134	1	7775800			22133	5070	10977	11023	25371	25371		89			0.0805391255057657
MPLEDMNEF	9	Unmodified	_MPLEDMNEF_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2343017458916	2	563.233193	1124.45183	2.3842	0.0013429	-0.27797	-0.00015656	2.1063	0.0011863	563.232820869651	59.191	0.35735	60.61	60.35	60.708	1.4196					22	11	3	0	0	0	0.11643	1	24798	24798		43.858	32.218	1	1602100			22134	2022	10978	11024	25372	25372					-0.1054155239667125
MPLEDMNEF	9	Unmodified	_MPLEDMNEF_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	563.233193	1124.45183	2.1451	0.0012082	1.0498	0.00059129	3.1949	0.0017995	563.2334788436336	58.705	0.35746	60.674	60.487	60.844	1.969	0.031855	0.00078894	NaN	43.858	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2118600			22135	2022	10978	11024							-0.1054155239667125
MPLHVAPLL	9	Unmodified	_MPLHVAPLL_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;NR2F2|p.K316Tfs*5|1|0.23|ENSG00000185551|chr15:96334579-96334580|-/CCTGG|frameshift_variant;NR2F2|p.A317Rfs*21|1|0.19|ENSG00000185551|chr15:96334580-96334581|-/GCGAGCTGTTTGTGTTGAATGC|frameshift_variant	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7950927615166	2	495.793881	989.573209	2.4776	0.0012284	0.65625	0.00032536	3.1338	0.0015537	495.7943366832362	59.229	0.58717	60.649	60.497	61.084	1.4196					48	18	4	0	0	0	0.051525	3	24861	24813;24861;24915		67.413	23.006	1	7168600			22136	4383	10979	11025	25373;25374;25375	25374					0.0780048281881136
MPLHVAPLL	9	Unmodified	_MPLHVAPLL_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;NR2F2|p.K316Tfs*5|1|0.23|ENSG00000185551|chr15:96334579-96334580|-/CCTGG|frameshift_variant;NR2F2|p.A317Rfs*21|1|0.19|ENSG00000185551|chr15:96334580-96334581|-/GCGAGCTGTTTGTGTTGAATGC|frameshift_variant	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7948791384697	2	495.793881	989.573209	2.1932	0.0010874	0.016525	8.1927E-06	2.2097	0.0010956	495.79405295591056	58.711	0.67578	60.68	60.487	61.162	1.969					47	21	4	0	0	0	0.035716	3	24650	24603;24650;24699		79.935	43.468	1	8037000			22137	4383	10979	11025	25376;25377;25378	25377					0.0780048281881136
MPLNVADLI	9	Unmodified	_MPLNVADLI_					0	0	0		ENST00000581621.1_1_17:7481648-7481801:+|nuORF;ZNF586-EIF4A1|3|fusion;ZNF586-EIF4A1|1|fusion;ENSG00000161960|ENST00000293831|EIF4A1	ENST00000581621.1_1_17:7481648-7481801:+|nuORF	ENST00000581621.1_1_17:7481648-7481801:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2736999392509	2	493.272978	984.531403	1.4784	0.00072926	-0.85052	-0.00041954	0.62789	0.00030972	493.2728814810147	83.797	0.37863	84.985	84.736	85.115	1.1879					27	11	3	0	0	0	0.046276	2	35165	35119;35165		70.716	36.613	1	2492200			22138	3602	10980	11026	25379;25380	25380					0.03851882339631629
MPLNVADLI	9	Unmodified	_MPLNVADLI_					0	0	0		ENST00000581621.1_1_17:7481648-7481801:+|nuORF;ZNF586-EIF4A1|3|fusion;ZNF586-EIF4A1|1|fusion;ENSG00000161960|ENST00000293831|EIF4A1	ENST00000581621.1_1_17:7481648-7481801:+|nuORF	ENST00000581621.1_1_17:7481648-7481801:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2729980349541	2	493.272978	984.531403	1.9445	0.00095919	-1.6473	-0.00081255	0.29728	0.00014664	493.2724041287278	83.289	0.37904	84.927	84.726	85.105	1.6379					23	11	3	0	0	0	0.1735	1	34988	34988		36.044	10.645	1	2209900			22139	3602	10980	11026	25381	25381					0.03851882339631629
MPMNVADLI	9	Unmodified	_MPMNVADLI_					0	0	0		ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2;ENSG00000141543|ENST00000649764|EIF4A3	ENSG00000156976|ENST00000323963|EIF4A2	ENSG00000156976|ENST00000323963|EIF4A2	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2528869509697	2	502.251188	1002.48782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.389	1	78.67	78.17	79.17	1.2809								0	0	0	0.026264	1	32482	32482		74.423	32.328	1				22140	3460	10981	11027	25382	25382					-0.013320504291414181
MPMNVADLI	9	Unmodified	_MPMNVADLI_					0	0	0		ENSG00000156976|ENST00000323963|EIF4A2;nc|ENSG00000156976|Q14240-2|EIF4A2;ENSG00000141543|ENST00000649764|EIF4A3	ENSG00000156976|ENST00000323963|EIF4A2	ENSG00000156976|ENST00000323963|EIF4A2	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2520324587822	2	502.251188	1002.48782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.968	1	78.728	78.228	79.228	1.7599								0	0	0	0.03046	1	32282	32282		70.716	40.079	1				22141	3460	10981	11027	25383	25383					-0.013320504291414181
MPNENIPEL	9	Unmodified	_MPNENIPEL_					0	0	0		ENST00000460499.5_1_2:27659579-27664676:+|nuORF;ENSG00000115216|ENST00000379852|NRBP1	ENST00000460499.5_1_2:27659579-27664676:+|nuORF	ENST00000460499.5_1_2:27659579-27664676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7560912966728	2	528.755149	1055.49575	2.0994	0.00111	0.058144	3.0744E-05	2.1575	0.0011408	528.7552907095636	50.546	0.55015	51.94	51.647	52.197	1.3938					37	17	3	0	0	0	0.086433	1	21150	21150		53.833	17.706	1	2615100			22142	1903	10982	11028	25384	25384					-0.029781999080341848
MPNENIPEL	9	Unmodified	_MPNENIPEL_					0	0	0		ENST00000460499.5_1_2:27659579-27664676:+|nuORF;ENSG00000115216|ENST00000379852|NRBP1	ENST00000460499.5_1_2:27659579-27664676:+|nuORF	ENST00000460499.5_1_2:27659579-27664676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7572509646416	2	528.755149	1055.49575	1.7903	0.00094665	0.97326	0.00051461	2.7636	0.0014613	528.7559596725777	50.036	0.49447	52.013	51.696	52.191	1.9772					33	15	3	0	0	0	0.086433	1	20927	20927		53.833	17.327	1	2725400			22143	1903	10982	11028	25385	25385					-0.029781999080341848
MPNLVGHEL	9	Unmodified	_MPNLVGHEL_					0	0	0		ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2610961794853	2	505.260402	1008.50625	2.509	0.0012677	-1.5247	-0.00077035	0.98438	0.00049737	505.2592042162031	41.325	0.91715	42.65	42.178	43.096	1.3254					59	28	3	0	0	0	0.086433	2	17357	17304;17357		53.833	32.962	1	2204200			22144	4343	10983	11029	25386;25387	25387					0.0023382753705618597
MPNLVGHEL	9	Unmodified	_MPNLVGHEL_					0	0	0		ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2609435915947	2	505.260402	1008.50625	1.9818	0.0010013	-0.91635	-0.000463	1.0655	0.00053835	505.2596396597497	40.951	0.6353	42.844	42.452	43.088	1.8927					43	19	3	0	0	0	0.079895	1	17096	17096		56.177	35.306	1	1924600			22145	4343	10983	11029	25388	25388					0.0023382753705618597
MPNVKVAVF	9	Unmodified	_MPNVKVAVF_					0	0	0		ENST00000481456.1_1_6:31503008-31508408:-|nuORF;ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7848998904228	2	502.783513	1003.55247	1.8386	0.0009244	-0.37185	-0.00018696	1.4667	0.00073744	502.78401555867816	49.144	0.37473	50.535	50.329	50.704	1.3911					26	11	3	0	0	0	0.066197	1	20583	20583		68.081	44.932	1	1945000			22146	5056	10984	11030	25389	25389					0.05083892439165538
MPNVKVAVF	9	Unmodified	_MPNVKVAVF_					0	0	0		ENST00000481456.1_1_6:31503008-31508408:-|nuORF;ENSG00000198563|ENST00000396172|DDX39B;nc|ENSG00000198563|Q13838-2|DDX39B	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	ENST00000481456.1_1_6:31503008-31508408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7847778201103	2	502.783513	1003.55247	1.7596	0.00088471	-1.0079	-0.00050675	0.75175	0.00037797	502.7838313649771	48.584	0.33997	50.562	50.39	50.73	1.9772					23	10	3	0	0	0	0.093705	1	20371	20371		65.235	44.364	1	2609700			22147	5056	10984	11030	25390	25390					0.05083892439165538
MPPLLAPLL	9	Unmodified	_MPPLLAPLL_					0	0	0		ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.8022033572197	2	482.798632	963.582711	4.0126	0.0019373	2.8755	0.0013883	6.8882	0.0033256	482.8003002728246	96.091	0.18707	96.512	96.414	96.601	0.42119					8	5	2	0	0	0	0.035716	1	40430	40430		79.935	35.528	1	1033800			22148	3209	10985	11031	25391	25391					0.09946251104349813
MPPLLAPLL	9	Unmodified	_MPPLLAPLL_					0	0	0		ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	ENSG00000148400|ENST00000651671|NOTCH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	482.798632	963.582711	3.1119	0.0015024	6.3256	0.003054	9.4376	0.0045564	482.8015384530469	95.846	0.19289	96.248	96.143	96.336	0.40208	-0.13212	0.0028465	NaN	79.935	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	737010			22149	3209	10985	11031							0.09946251104349813
MPSATSKSSL	10	Unmodified	_MPSATSKSSL_					0	0	0		ENST00000522519.5_1_8:72875247-72964803:+|nuORF;ENST00000521467.5_1_8:72875247-72914501:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7559997439384	2	504.755149	1007.49575	2.0509	0.0010352	-2.8103	-0.0014185	-0.75939	-0.0003833	504.7551535406102	66.717	0.40685	68.106	67.903	68.31	1.3888					29	12	3	0	0	0	0.38174	2	28006	27961;28006		34.402	10.947	1	2004800			22150	7083	10986	11032	25392;25393	25393					-0.007701999080154565
MPSATSKSSL	10	Unmodified	_MPSATSKSSL_					0	0	0		ENST00000522519.5_1_8:72875247-72964803:+|nuORF;ENST00000521467.5_1_8:72875247-72914501:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7564880251884	2	504.755149	1007.49575	1.6124	0.00081384	-1.7688	-0.0008928	-0.15643	-7.8958E-05	504.7552047667732	66.276	0.34686	68.165	67.962	68.309	1.8889					26	10	3	0	0	0	0.38174	1	27799	27799		34.402	9.7278	1	1883900			22151	7083	10986	11032	25394	25394					-0.007701999080154565
MPSLFMRL	8	Unmodified	_MPSLFMRL_					0	0	0			REV__ENST00000394650.6_1_4:110608787-110608862:+|nuORF	REV__ENST00000394650.6_1_4:110608787-110608862:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7671996951103	2	497.764266	993.513979	2.8861	0.0014366	1.8845	0.00093805	4.7706	0.0023746	497.7654646915321	80.864	0.39246	82.097	81.923	82.316	1.2332					27	12	3	0	0	0	0.87106	1	33938	33938		14.582	2.0501	1	2494400	+		22152	12830	10987	11033	25395	25395					0.01696263532994635
MPSQFRDIL	9	Unmodified	_MPSQFRDIL_					0	0	0		ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7870971560478	2	553.786784	1105.55902	2.5603	0.0014179	-2.9885	-0.001655	-0.42821	-0.00023714	553.7849970723413	50.243	0.4707	51.634	51.451	51.921	1.3911					34	14	3	0	0	0	0.16939	1	21101	21101		36.506	13.77	1	3542700			22153	1271	10988	11034	25396	25396					0.010457855998993182
MPSQFRDIL	9	Unmodified	_MPSQFRDIL_					0	0	0		ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7864868044853	2	553.786784	1105.55902	1.6013	0.00088676	-2.7773	-0.001538	-1.176	-0.00065126	553.7852404252582	49.687	0.4715	51.664	51.475	51.946	1.9772					33	14	3	0	0	0	0.3091	1	20882	20882		24.991	5.629	1	3051900			22154	1271	10988	11034	25397	25397					0.010457855998993182
MPTIQITAL	9	Unmodified	_MPTIQITAL_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.G1956Wfs*9|1|0.04|ENSG00000119285|chr1:236555353-236555354|-/A|frameshift_variant;ENST00000490339.1_1_1:236737366-236737993:-|nuORF	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2820312380791	2	494.280803	986.547053	2.2372	0.0011058	0.55755	0.00027559	2.7947	0.0013814	494.2813113725083	71.363	0.36139	72.704	72.451	72.812	1.3415					30	11	4	0	0	0	0.049839	2	29942	29895;29942		68.081	24.222	1	4844200			22155	2062	10989	11035	25398;25399	25399					0.05324168856668621
MPTIQITAL	9	Unmodified	_MPTIQITAL_					0	0	0		HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant;ENSG00000119285|ENST00000366582|HEATR1;HEATR1|p.G1956Wfs*9|1|0.04|ENSG00000119285|chr1:236555353-236555354|-/A|frameshift_variant;ENST00000490339.1_1_1:236737366-236737993:-|nuORF	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	HEATR1|p.P2064Hfs*2|1|0.04|ENSG00000119285|chr1:236553627-236553627|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2825500369072	2	494.280803	986.547053	0.94708	0.00046812	2.1348	0.0010552	3.0819	0.0015233	494.2819390006942	70.826	0.39207	72.664	72.472	72.864	1.8378					36	12	4	0	0	0	0.063746	2	29737	29674;29737		62.573	18.714	1	5499000			22156	2062	10989	11035	25400;25401	25401					0.05324168856668621
MPTSSVVNMEF	11	Unmodified	_MPTSSVVNMEF_					0	0	0		ENST00000257575.8_1_12:117178177-117178294:+|nuORF	ENST00000257575.8_1_12:117178177-117178294:+|nuORF	ENST00000257575.8_1_12:117178177-117178294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.2831298708916	2	621.280674	1240.5468	2.5848	0.0016059	-0.97664	-0.00060677	1.6082	0.00099915	621.2810823291197	61.999	0.35014	63.417	63.206	63.556	1.4177					24	10	3	0	0	0	0.16695	1	25982	25982		43.772	27.623	1	1450200			22157	5603	10990	11036	25402	25402					-0.06385618925469316
MPTSSVVNMEF	11	Unmodified	_MPTSSVVNMEF_					0	0	0		ENST00000257575.8_1_12:117178177-117178294:+|nuORF	ENST00000257575.8_1_12:117178177-117178294:+|nuORF	ENST00000257575.8_1_12:117178177-117178294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2831298708916	2	621.280674	1240.5468	1.8611	0.0011562	-0.21284	-0.00013223	1.6482	0.001024	621.2809953191145	61.46	0.35234	63.417	63.241	63.594	1.9571					22	10	3	0	0	0	0.22376	1	25783	25783		38.176	16.639	1	1140100			22158	5603	10990	11036	25403	25403					-0.06385618925469316
MPVKGKGG	8	Unmodified	_MPVKGKGG_					0	0	0			REV__tr|A0A553SM83|A0A553SM83_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_22080PE=4SV=1	REV__tr|A0A553SM83|A0A553SM83_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_22080PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	387.2847473025322	2	387.220549	772.426544	2.4782	0.0009596	0.39322	0.00015226	2.8714	0.0011119	387.2204786794209	107.88	0.11649	108.04	107.99	108.11	0.15781					11	8	2	0	0	0	2.3239	1	46525	46525		0	0	1	18996000	+		22159	15009	10991	11037	25404	25404					0.031228056537543125
MPVPEILQL	9	Unmodified	_MPVPEILQL_					0	0	0		nc|ENSG00000184719|Q5VYX0-2|RNLS;ENSG00000184719|ENST00000331772|RNLS	nc|ENSG00000184719|Q5VYX0-2|RNLS	nc|ENSG00000184719|Q5VYX0-2|RNLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7992431521416	2	520.296453	1038.57835	2.3159	0.001205	1.399	0.0007279	3.7149	0.0019329	520.2974881972397	84.891	0.36753	86.05	85.843	86.21	1.159					22	11	3	0	0	0	0.49082	1	35591	35591		15.847	3.3156	1	1712000			22160	4705	10992	11038	25405	25405					0.060607418907920874
MPVPEILQL	9	Unmodified	_MPVPEILQL_					0	0	0		nc|ENSG00000184719|Q5VYX0-2|RNLS;ENSG00000184719|ENST00000331772|RNLS	nc|ENSG00000184719|Q5VYX0-2|RNLS	nc|ENSG00000184719|Q5VYX0-2|RNLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3000976443291	2	520.296453	1038.57835	2.3754	0.0012359	2.4668	0.0012835	4.8422	0.0025194	520.298161808012	84.432	0.35966	86.028	85.798	86.158	1.5962					17	11	2	0	0	0	0.37357	1	35418	35418		21.747	6.9084	1	1392000			22161	4705	10992	11038	25406	25406					0.060607418907920874
MQEFSPLGAY	10	Unmodified	_MQEFSPLGAY_					0	0	0			REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	REV__nc|ENSG00000101452|Q9H5Z1-2|DHX35	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5115234255791	3	381.511075	1141.5114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.162	1	21.721	21.221	22.221	1.5593								0	0	0	0.65149	1	8383	8383		12.873	2.0731	1		+		22162	9037	10993	11039	25407	25407					-0.05369913390950387
MQFERKLED	9	Unmodified	_MQFERKLED_					0	0	0			REV__tr|A0A553SFV3|A0A553SFV3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09530PE=4SV=1	REV__tr|A0A553SFV3|A0A553SFV3_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09530PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.1980163455009	3	399.197379	1194.57031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.19	103.69	104.69	0.16055								0	0	0	0.42693	1	44000	44000		1.0715	0	1		+		22163	14724	10994	11040	25408	25408					-0.01919437096648835
MQKIMHIS	8	Unmodified	_MQKIMHIS_					0	0	0		nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;ENST00000471736.5_1_4:158142110-158255356:+|nuORF;GRIA2|p.L542Mfs*16|1|0.37|ENSG00000120251|chr4:157336524-157336530|CCTTTAG/-|frameshift_variant	nc|ENSG00000120251|P42262-2|GRIA2	nc|ENSG00000120251|P42262-2|GRIA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3365051150322	2	494.259348	986.504143	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.2	103.7	104.7	0.1731								0	0	0	1.0178	1	43938	43938		0.79363	0	1				22164	2098	10995	11041	25409	25409					0.010350755276022028
MQKLKPLVSL	10	Unmodified	_MQKLKPLVSL_					0	0	0			REV__tr|A0A7D6ZVX2|A0A7D6ZVX2_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15485PE=3SV=1	REV__tr|A0A7D6ZVX2|A0A7D6ZVX2_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15485PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8647338747978	2	578.859752	1155.70495	3.7882	0.0021929	3.3673	0.0019492	7.1555	0.0041421	578.8615083863857	82.026	0.40657	83.239	83.099	83.505	1.2125					16	12	2	0	0	0	0.78468	1	34443	34443		13.906	1.6654	1	700030	+		22165	15738	10996	11042	25410	25410					0.13332668115913293
MQKSVVITL	9	Unmodified	_MQKSVVITL_					0	0	0		ENSG00000173198|ENST00000373304|CYSLTR1	ENSG00000173198|ENST00000373304|CYSLTR1	ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8044311404228	2	509.801903	1017.58925	4.1708	0.0021263	1.6874	0.00086026	5.8582	0.0029865	509.80250007937366	81.923	0.46587	83.136	82.945	83.411	1.2125					37	14	3	0	0	0	0.19075	1	34414	34414		34.102	0	1	5138900			22166	4272	10997	11043	25411	25411					0.08116144265068215
MQKSVVITL	9	Unmodified	_MQKSVVITL_					0	0	0		ENSG00000173198|ENST00000373304|CYSLTR1	ENSG00000173198|ENST00000373304|CYSLTR1	ENSG00000173198|ENST00000373304|CYSLTR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8031494021416	2	509.801903	1017.58925	4.1912	0.0021367	1.9517	0.00099498	6.1429	0.0031316	509.8026212904097	81.625	0.52696	83.321	83.043	83.57	1.6959					40	16	3	0	0	0	0.27148	1	34207	34207		26.884	0	1	3818600			22167	4272	10997	11043	25412	25412					0.08116144265068215
MQLLLIRRVL	10	Unmodified	_MQLLLIRRVL_					0	0	0			REV__ENST00000455532.5_1_20:13567980-13605857:-|nuORF	REV__ENST00000455532.5_1_20:13567980-13605857:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	315.0808288455009	4	314.457422	1253.80058	-2.1342	-0.00067111	3.1978	0.0010056	1.0636	0.00033445	314.70917287600514	56.024	0.32176	56.024	55.851	56.173	0					15	10	2	0	0	0	0.12559	1	23308	23308		0.77653	0.14971	1	1442900	+		22168	13161	10998	11044	25413	25413					0.1838344102679912
MRFNYFWVK	9	Unmodified	_MRFNYFWVK_					0	0	0			REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	REV__ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885986208916	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.071	1	19.264	18.764	19.764	0.19342								0	0	0	0.42693	1	7919	7919		2.7352	0.82882	1		+		22169	13406	10999	11045	25414	25414					0.0047005762478420365
MRKQYKKKR	9	Unmodified	_MRKQYKKKR_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1950866580009	4	317.196034	1264.75503	-0.88261	-0.00027996	0.45922	0.00014566	-0.4234	-0.0001343	317.19609650528974	34.745	0.40807	36.02	35.853	36.262	1.2746					87	40	3	0	0	0	0.82114	1	14532	14532		2.4985	0.59211	1	31566000	+		22170	9645	11000	11046	25415	25415					0.13324215564421138
MRLLRLQRR	9	Unmodified	_MRLLRLQRR_					0	0	0		ENSG00000215305|ENST00000380445|VPS16;ENST00000380393.7_1_20:2844875-2903853:+|nuORF;ENST00000380443.5_1_20:2843179-2847217:+|nuORF;nc|ENSG00000215305|Q9H269-2|VPS16	ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.5979492068291	3	414.596031	1240.76626	2.8851	0.0011961	2.3603	0.00097857	5.2454	0.0021747	414.59689974619147	92.381	0.49396	92.549	92.281	92.775	0.16835					60	15	5	0	0	0	0.85019	1	38697	38697		0.23584	0.095952	1	26035000			22171	5256	11001	11047	25416	25416					0.15551037658542555
MRNRNRKSWRK	11	Unmodified	_MRNRNRKSWRK_					0	0	0		ENST00000542357.1_1_12:6747897-6752833:-|nuORF	ENST00000542357.1_1_12:6747897-6752833:-|nuORF	ENST00000542357.1_1_12:6747897-6752833:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.2907592654228	3	511.288148	1530.84262	1.9142	0.00097872	2.4022	0.0012282	4.3165	0.002207	511.2894937890966	45.831	0.58231	46.16	45.926	46.508	0.32899					43	18	4	0	0	0	1.0224	1	19253	19253		2.4348	1.22	1	3303800			22172	7221	11002	11048	25417	25417					0.09842809487895465
MRNYFHKRWLH	11	Unmodified	_MRNYFHKRWLH_					0	0	0			REV__MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|73|2|anti-sense	REV__MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|73|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	794.9159423708916	2	794.409329	1586.8041	0.91226	0.00072471	3.7298	0.002963	4.642	0.0036877	794.4126034839788	77.614	0.3282	79.366	79.167	79.495	1.7514					24	10	3	0	0	0	1.0362	1	32587	32587		1.3295	0.25807	1	4248400	+		22173	14356	11003	11049	25418	25418					0.034175038533931
MRQAYYAA	8	Unmodified	_MRQAYYAA_					0	0	0			REV__ENST00000529558.1_1_11:46526218-46534359:-|nuORF	REV__ENST00000529558.1_1_11:46526218-46534359:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2325622439384	2	487.231645	972.448736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.98	1	102.04	101.54	102.54	0.062805								0	0	0	1.0178	1	42699	42699		0.79363	0	1		+		22174	9300	11004	11050	25419	25419					-0.038590146685237414
MRQFIRFLAK	10	Unmodified	_MRQFIRFLAK_					0	0	0		tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	655.3845703005791	2	655.381717	1308.74888	2.5642	0.0016806	1.0571	0.00069279	3.6213	0.0023733	655.3821756792834	83.54	2.4253	83.54	82.706	85.132	0					178	77	4	0	0	0	0.88278	3	35041	35041;35111;35186		6.2058	3.2105	1	7371300			22175	16086	11005	11051	25420;25421;25422	25420					0.10685697332928612
MRQFIRFLAK	10	Unmodified	_MRQFIRFLAK_					0	0	0		tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	tr|A0A553SFZ4|A0A553SFZ4_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09760PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	655.3837158083916	2	655.381717	1308.74888	2.2644	0.001484	1.5654	0.0010259	3.8298	0.00251	655.3824177491845	83.357	2.4268	83.627	82.756	85.183	0.27029					216	77	5	0	0	0	0.88278	1	35174	35174		6.2058	3.2105	1	5228000			22176	16086	11005	11051	25423	25423					0.10685697332928612
MRREWVWHPCW	11	Unmodified	_MRREWVWHPCW_					0	0	0			REV__ENST00000449742.6_1_6:30126994-30128439:-|nuORF	REV__ENST00000449742.6_1_6:30126994-30128439:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	793.3737060427666	2	793.368815	1584.72308	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.342	1	75.142	74.642	75.642	1.8004								0	0	0	0.63775	1	30764	30764		1.3295	0	1		+		22177	13123	11006	11052	25424	25424					-0.04589520181025364
MRRKLKKLR	9	Unmodified	_MRRKLKKLR_					0	0	0		tr|A0A7D6VR71|A0A7D6VR71_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18210PE=4SV=1	tr|A0A7D6VR71|A0A7D6VR71_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18210PE=4SV=1	tr|A0A7D6VR71|A0A7D6VR71_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18210PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	614.9145385622978	2	614.910976	1227.8074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.09	1	12.09	11.59	12.59	0								0	0	0	0.42693	1	5001	5001		0.52476	0	1				22178	16821	11007	11053	25425	25425					0.20260798698041071
MRRRRRWTRR	10	Unmodified	_MRRRRRWTRR_					0	0	0		ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.6355468630791	3	510.635882	1528.88582	2.7834	0.0014213	-3.1816	-0.0016247	-0.39827	-0.00020337	510.6344476315024	90.189	1.0111	90.398	89.888	90.9	0.20904					60	31	3	0	0	0	0.89803	1	37795	37795		0.13989	0.13989	1	1120300			22179	5702	11008	11054	25426	25426					0.14253044055840292
MRRRRRWTRR	10	Unmodified	_MRRRRRWTRR_					0	0	0		ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	510.635882	1528.88582	4.9605	0.002533	-3.8586	-0.0019703	1.1019	0.00056268	510.63404762708046	89.316	0.81833	90.72	90.168	90.986	1.4045	0.15136	-0.00075284	NaN	0.13989	55	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1364700			22180	5702	11008	11054							0.14253044055840292
MRRRRVRLRLK	11	Unmodified	_MRRRRVRLRLK_					0	0	0		ENST00000492897.3_1_17:46669706-46679621:+|nuORF	ENST00000492897.3_1_17:46669706-46679621:+|nuORF	ENST00000492897.3_1_17:46669706-46679621:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	386.1544982790947	4	385.754582	1538.98922	1.7439	0.00067272	0.14753	5.6911E-05	1.8914	0.00072963	385.7543926835035	42.991	0.28959	43.315	43.126	43.416	0.32389					14	9	2	0	0	0	0.14606	1	18062	18062		0	0	1	550820			22181	6920	11009	11055	25427	25427					0.2412853144364817
MRVRPVFV	8	Unmodified	_MRVRPVFV_					0	0	0			REV__nc|ENSG00000188818|Q9H8X9-2|ZDHHC11	REV__nc|ENSG00000188818|Q9H8X9-2|ZDHHC11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3001281619072	2	502.297122	1002.57969	4.093	0.0020559	0.2681	0.00013467	4.3611	0.0021906	502.2977860843613	95.662	0.24535	96.083	95.975	96.22	0.4212					13	7	2	0	0	0	0.87106	1	40263	40263		14.582	2.0501	1	1710900	+		22182	14514	11010	11056	25428	25428					0.07850420770205346
MRWWQFCRWER	11	Unmodified	_MRWWQFCRWER_					0	0	0			REV__ENST00000430334.7_1_17:43555485-43568071:-|nuORF	REV__ENST00000430334.7_1_17:43555485-43568071:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	842.3947021365166	2	842.392822	1682.77109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.554	1	48.936	48.436	49.436	1.3825								0	0	0	0.63775	1	19907	19907		1.0715	0.76443	1		+		22183	13022	11011	11057	25429	25429					-0.04298446260986566
MSADPHLASSL	11	Unmodified	_MSADPHLASSL_					0	0	0		nc|ENSG00000197183|Q96MY1-2|NOL4L;nc|ENSG00000197183|Q96MY1|NOL4L;ENSG00000197183|ENST00000621426|NOL4L	nc|ENSG00000197183|Q96MY1-2|NOL4L	nc|ENSG00000197183|Q96MY1-2|NOL4L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7753784060478	2	564.771331	1127.52811	3.1874	0.0018001	2.5133	0.0014194	5.7007	0.0032196	564.7727150209137	81.13	0.33832	82.363	82.225	82.564	1.2332					21	10	3	0	0	0	0.77451	1	34044	34044		16.149	2.6412	1	1113500			22184	4987	11012	11058	25430	25430					-0.030554125050457515
MSADPHLASSL	11	Unmodified	_MSADPHLASSL_					0	0	0		nc|ENSG00000197183|Q96MY1-2|NOL4L;nc|ENSG00000197183|Q96MY1|NOL4L;ENSG00000197183|ENST00000621426|NOL4L	nc|ENSG00000197183|Q96MY1-2|NOL4L	nc|ENSG00000197183|Q96MY1-2|NOL4L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.771331	1127.52811	2.1834	0.0012331	4.8359	0.0027312	7.0193	0.0039643	564.7745421977892	80.744	0.39968	82.44	82.241	82.64	1.6959	0.038624	0.0013871	NaN	16.149	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1184200			22185	4987	11012	11058							-0.030554125050457515
MSADYEEIL	9	Unmodified	_MSADYEEIL_					0	0	0		ENST00000510227.1_1_5:80604748-80608478:+|nuORF;ENSG00000131732|ENST00000407610|ZCCHC9	ENST00000510227.1_1_5:80604748-80608478:+|nuORF	ENST00000510227.1_1_5:80604748-80608478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7410156130791	2	535.739165	1069.46378	3.6162	0.0019373	-1.7328	-0.00092832	1.8834	0.001009	535.7388808683417	73.289	0.40981	74.618	74.381	74.791	1.3297					28	12	3	0	0	0	0.5697	2	30729	30729;30782		12.532	0.89125	1	2585500			22186	2502	11013	11059	25431;25432	25431					-0.06817612381814797
MSCLHAWGL	9	Unmodified	_MSCLHAWGL_					0	0	0		nc|ENSG00000091157|Q9Y4E6-2|WDR7;ENSG00000091157|ENST00000254442|WDR7	nc|ENSG00000091157|Q9Y4E6-2|WDR7	nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.3254272341728	2	509.235873	1016.45719	2.5751	0.0013114	2.7672	0.0014092	5.3423	0.0027205	509.23636775865094	69.452	0.15023	70.817	70.758	70.908	1.3657					10	4	3	0	0	0	0.11463	1	29146	29146		12.532	6.1774	1	865570			22187	1148	11014	11060	25433	25433					-0.050377840235341864
MSFGNVVEL	9	Unmodified	_MSFGNVVEL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	995.4850341677666	1	995.486644	994.479368	3.3603	0.0033451	-0.5149	-0.00051258	2.8454	0.0028326	995.4838414238056	69.484	0.32877	70.849	70.674	71.002	1.3657					22	10	3	0	0	0	0.091139	1	29141	29141		52.268	14.117	1	3048200			22188	2852	11015	11061	25434	25434					-0.01809281074122282
MSFGNVVEL	9	Unmodified	_MSFGNVVEL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2484008669853	2	498.24696	994.479368	2.1845	0.0010884	3.5056	0.0017466	5.6901	0.0028351	498.2472169510227	69.436	0.35786	70.801	70.645	71.002	1.3657					25	11	3	0	0	0	0.063746	1	29142	29142		62.573	11.718	1	6917500			22189	2852	11015	11061	25435	25435					-0.01809281074122282
MSFGNVVEL	9	Unmodified	_MSFGNVVEL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	995.4910156130791	1	995.486644	994.479368	1.7092	0.0017015	0.36903	0.00036736	2.0782	0.0020688	995.4859305737488	68.972	0.30254	70.825	70.617	70.92	1.853					15	9	2	0	0	0	0.057024	1	28908	28908		65.235	20.828	1	2303300			22190	2852	11015	11061	25436	25436					-0.01809281074122282
MSFGNVVEL	9	Unmodified	_MSFGNVVEL_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	498.24696	994.479368	1.1353	0.00056564	2.549	0.00127	3.6842	0.0018357	498.24706709509775	68.959	0.3597	70.812	70.617	70.977	1.853	0.0055006	-0.00043288	NaN	62.573	31	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4703200			22191	2852	11015	11061							-0.01809281074122282
MSFVEDVTI	9	Unmodified	_MSFVEDVTI_					0	0	0		ENSG00000196821|ENST00000374023|ILRUN;nc|ENSG00000196821|Q9H6K1-2|ILRUN;C6orf106-ZFAND3|1|fusion	ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7515136599541	2	520.752075	1039.4896	2.6988	0.0014054	-1.0226	-0.00053252	1.6762	0.00087291	520.7512520834307	72.367	0.40121	74.177	73.952	74.353	1.8101					27	12	3	0	0	0	0.61249	1	30403	30403		10.824	1.4765	1	2263400			22192	4964	11016	11062	25437	25437					-0.028567181395374064
MSGLLKVW	8	Oxidation (M)	_M(Oxidation (M))SGLLKVW_		M(1)SGLLKVW		M(89)SGLLKVW	0	0	1		ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.2626830935478	2	475.262413	948.510274	1.609	0.0007647	0.29065	0.00013814	1.8997	0.00090284	475.26248587425397	48.46	0.49357	49.848	49.585	50.079	1.388					27	15	2	0	0	0	0.12697	1	20277	20277		88.954	60.467	1	6129500			22193	2346	11017	11063	25438	25438		43			0.03395917030786677
MSGLLKVW	8	Oxidation (M)	_M(Oxidation (M))SGLLKVW_					0	0	1		ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	475.262413	948.510274	2.5375	0.001206	-1.6688	-0.0007931	0.86874	0.00041288	475.2619075963751	47.921	0.40151	49.897	49.681	50.083	1.976	0.024697	-0.0010079	NaN	88.954	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3748400			22194	2346	11017	11063				43			0.03395917030786677
MSGLLKVW	8	Unmodified	_MSGLLKVW_					0	0	0		ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2656127810478	2	467.264956	932.515359	1.2818	0.00059895	0.030159	1.4092E-05	1.312	0.00061304	467.26505141144526	56.541	0.49197	57.956	57.722	58.214	1.4145					43	15	4	0	0	0	0.065974	3	23738	23647;23696;23738		99.799	75.125	1	16707000			22195	2346	11017	11064	25439;25440;25441	25441					0.04640220893406877
MSGLLKVW	8	Unmodified	_MSGLLKVW_					0	0	0		ENSG00000127837|ENST00000248450|AAMP;ENST00000475678.5_1_2:219131145-219134809:-|nuORF;ENST00000489767.5_1_2:219130391-219134818:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2658264040947	2	467.264956	932.515359	1.3512	0.00063138	0.052325	2.4449E-05	1.4035	0.00065583	467.2649961338083	55.948	0.55045	57.916	57.69	58.241	1.9684					42	17	4	0	0	0	0.051422	3	23504	23420;23465;23504		111.29	79.17	1	17716000			22196	2346	11017	11064	25442;25443;25444	25444					0.04640220893406877
MSHSFWLAPNL	11	Unmodified	_MSHSFWLAPNL_					0	0	0			REV__ENSG00000166619|ENST00000373537|BLCAP	REV__ENSG00000166619|ENST00000373537|BLCAP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	651.6542236208916	2	651.818615	1301.62268	1.0071	0.00065646	0.69002	0.00044977	1.6971	0.0011062	652.3199722978386	51.842	0.86364	53.815	53.245	54.109	1.9722					43	28	3	0	0	0	0.14538	1	21683	21683		16.149	0	1	3211600	+		22197	10832	11018	11065	25445	25445					-0.016068539630168743
MSLIGLIELLI	11	Oxidation (M)	_M(Oxidation (M))SLIGLIELLI_		M(1)SLIGLIELLI		M(50)SLIGLIELLI	0	0	1			REV__tr|A0A7D6ZZE4|A0A7D6ZZE4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19975PE=4SV=1	REV__tr|A0A7D6ZZE4|A0A7D6ZZE4_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8768188357353	2	615.872525	1229.7305	3.0867	0.001901	1.8212	0.0011216	4.9078	0.0030226	615.8741022030159	96.311	0.15118	96.617	96.513	96.664	0.3062					7	4	2	0	0	0	0.13258	1	40518	40518		49.933	11.757	1	3720500	+		22198	15792	11019	11066	25446	25446		129			0.12482097847669138
MSLLCVRVK	9	Unmodified	_MSLLCVRVK_					0	0	0		nc|ENSG00000198722|O14795|UNC13B;nc|ENSG00000198722|O14795-2|UNC13B;ENSG00000198722|ENST00000635942|UNC13B;UNC13B|p.S193Ffs*85|1|0.13|ENSG00000198722|chr9:35295744-35295745|-/ATTCTGTCTGGAATTTTCTTTTTCTAGTT|frameshift_variant	nc|ENSG00000198722|O14795|UNC13B	nc|ENSG00000198722|O14795|UNC13B	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.2054015994072	3	350.20504	1047.59329	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.992	1	38.81	38.31	39.31	1.8176								0	0	0	0.42693	1	15522	15522		2.7352	0.45242	1				22199	5072	11020	11067	25447	25447					0.07139910487126144
MSPVCHHG	8	Unmodified	_MSPVCHHG_					0	0	0		ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	434.2433654665947	2	434.18364	866.352727	3.3164	0.0014399	0.52972	0.00022999	3.8461	0.0016699	434.1842320227208	104.72	0.077225	104.89	104.85	104.92	0.1731					5	3	2	0	0	0	2.3239	1	44372	44372		0.79363	0	1	8752800			22200	7056	11021	11068	25448	25448					-0.08579485780239793
MSPVCHHG	8	Unmodified	_MSPVCHHG_					0	0	0		ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	434.18364	866.352727	0.66421	0.00028839	3.9547	0.0017171	4.6189	0.0020054	434.1858554566816	104.84	0.071396	104.84	104.79	104.86	0	-0.043769	0.0014172	NaN	0.79363	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14222000			22201	7056	11021	11068							-0.08579485780239793
MSPVCHHG	8	Unmodified	_MSPVCHHG_					0	0	0		ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	434.18364	866.352727	3.1513	0.0013682	3.295	0.0014306	6.4463	0.0027989	434.18604453751726	104.81	0.073868	104.86	104.8	104.87	0.056801	-0.016888	0.00084432	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10851000			22202	7056	11021	11068							-0.08579485780239793
MSPVCHHG	8	Unmodified	_MSPVCHHG_					0	0	0		ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	ENST00000517479.1_1_X:47077465-47077851:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	434.18364	866.352727	3.3036	0.0014344	1.8897	0.00082049	5.1934	0.0022549	434.18514503488575	104.77	0.094788	104.93	104.86	104.95	0.16055	0.04639	-0.00037596	NaN	0.79363	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7385700			22203	7056	11021	11068							-0.08579485780239793
MSQMTRASI	9	Unmodified	_MSQMTRASI_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7488891482353	2	512.749344	1023.48414	1.3913	0.00071339	-3.1431	-0.0016116	-1.7518	-0.00089824	512.7474934416556	70.216	0.38917	70.538	70.319	70.708	0.32224					44	12	5	0	0	0	0.6486	1	29338	29338		9.3831	1.473	1	7560100	+		22204	14463	11022	11069	25449	25449					-0.026667202030125736
MSQMTRASI	9	Unmodified	_MSQMTRASI_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7491332888603	2	512.749344	1023.48414	2.2381	0.0011476	-1.6788	-0.0008608	0.55929	0.00028677	512.7479282431854	69.132	0.61017	70.498	70.091	70.701	1.3657					54	19	5	0	0	0	0.30098	2	28968	28968;29016		25.399	1.2657	1	12384000	+		22205	14463	11022	11069	25450;25451	25450					-0.026667202030125736
MSQMTRASI	9	Unmodified	_MSQMTRASI_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7488891482353	2	512.749344	1023.48414	2.0888	0.001071	-2.9744	-0.0015251	-0.88562	-0.0004541	512.7476467370267	68.603	0.49764	70.456	70.12	70.617	1.853					45	15	5	0	0	0	0.23535	1	28736	28736		29.082	0.59474	1	10813000	+		22206	14463	11022	11069	25452	25452					-0.026667202030125736
MSSCAENWSTK	11	Unmodified	_MSSCAENWSTK_					0	0	0			REV__ENST00000295598.9_1_1:116947075-116947252:+|nuORF	REV__ENST00000295598.9_1_1:116947075-116947252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.1736938357353	3	415.174246	1242.50091	-0.5554	-0.00023059	-2.6801	-0.0011127	-3.2355	-0.0013433	415.17362115321816	13.718	0.33961	13.718	13.517	13.856	0					39	10	5	0	0	0	0.90941	1	5654	5654		9.2438	1.6348	1	3973800	+		22207	12289	11023	11070	25453	25453					-0.1106426410772201
MSTLLITDT	9	Unmodified	_MSTLLITDT_					0	0	0			REV__FBXO40|p.P678T|1|0.31|ENSG00000163833|chr3:121626812-121626812|C/A|missense_variant	REV__FBXO40|p.P678T|1|0.31|ENSG00000163833|chr3:121626812-121626812|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7603942751884	2	497.759901	993.505248	2.2572	0.0011236	-0.95579	-0.00047576	1.3014	0.0006478	497.7595854552568	49.762	0.43559	51.153	50.888	51.324	1.3911					41	13	4	0	0	0	0.12174	1	20877	20877		42.095	6.0504	1	6579300	+		22208	14161	11024	11071	25454	25454					0.008235683774728386
MSTRNCQGMDS	11	Unmodified	_MSTRNCQGMDS_					0	0	0		CDK14|p.K110Rfs*4|1|0.31|ENSG00000058091|chr7:90726771-90726772|AA/-|frameshift_variant;CDK14|p.L138Pfs*10|1|0.03|ENSG00000058091|chr7:90747723-90747724|-/CTCACTCCTTACCCTCT|frameshift_variant;nc|ENSG00000058091|O94921-3|CDK14;nc|ENSG00000058091|O94921-2|CDK14;ENSG00000058091|ENST00000380050|CDK14	CDK14|p.K110Rfs*4|1|0.31|ENSG00000058091|chr7:90726771-90726772|AA/-|frameshift_variant	CDK14|p.K110Rfs*4|1|0.31|ENSG00000058091|chr7:90726771-90726772|AA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.8299133181572	3	410.495102	1228.46348	0.30543	0.00012538	1.1581	0.00047538	1.4635	0.00060075	410.4958471918997	32.702	0.31104	33.98	33.824	34.135	1.2782					33	10	5	0	0	0	1.0131	1	13703	13703		1.2148	0	1	2145900			22209	142	11025	11072	25455	25455					-0.14161678644995845
MTAYVLIMLK	10	Unmodified	_MTAYVLIMLK_					0	0	0			REV__tr|A0A553SHS8|A0A553SHS8_NIACIGlutamate:proteinsymporterOS=NialliacirculansOX=1397GN=CEQ21_13555PE=4SV=1	REV__tr|A0A553SHS8|A0A553SHS8_NIACIGlutamate:proteinsymporterOS=NialliacirculansOX=1397GN=CEQ21_13555PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.8929321169853	3	394.892351	1181.65522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.754	1	41.754	41.254	42.254	0								0	0	0	0.65923	1	17478	17478		5.7834	0	1		+		22210	14813	11026	11073	25456	25456					0.07166217115604923
MTCCDAFF	8	Unmodified	_MTCCDAFF_					0	0	0		ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	313.1138488650322	3	313.11327	936.317981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.778	1	50.108	49.608	50.608	0.33019								0	0	0	1.0178	1	20857	20857		0.45834	0	1				22211	5830	11027	11074	25457	25457					-0.15272489703215797
MTCCDAFF	8	Unmodified	_MTCCDAFF_					0	0	0		ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	313.1137573122978	3	313.11327	936.317981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.921	1	63.251	62.751	63.751	0.32974								0	0	0	1.0178	1	26362	26362		0.45834	0	1				22212	5830	11027	11074	25458	25458					-0.15272489703215797
MTCCDAFF	8	Unmodified	_MTCCDAFF_					0	0	0		ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	ENST00000316292.13_1_6:74230401-74230437:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	313.1131164431572	3	313.11327	936.317981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.363	1	34.188	33.688	34.688	1.8246								0	0	0	1.0178	1	13565	13565		0.45834	0	1				22213	5830	11027	11074	25459	25459					-0.15272489703215797
MTEEEMLDCF	10	Unmodified	_MTEEEMLDCF_					0	0	0		ENSG00000158023|ENST00000288912|CFAP251	ENSG00000158023|ENST00000288912|CFAP251	ENSG00000158023|ENST00000288912|CFAP251	MSMS	GG20161007_CRH_Patient100_A02_01	1	624.2366210818291	2	624.235075	1246.4556	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2363	1	7.2363	6.7363	7.7363	0								0	0	0	0.66237	1	2976	2976		0.45834	0	1				22214	3489	11028	11075	25460	25460					-0.15777250685118815
MTHALFPP	8	Unmodified	_MTHALFPP_					0	0	0		PNPLA1|p.D236N|1|0.21|ENSG00000180316|chr6:36294391-36294391|G/A|missense_variant;nc|ENSG00000180316|Q8N8W4-2|PNPLA1;nc|ENSG00000180316|Q8N8W4-3|PNPLA1;PNPLA1|p.P385Qfs*81|1|0.05|ENSG00000180316|chr6:36302238-36302239|-/AAGAAACCATTTTTGCAAAGGCCATGCTG|frameshift_variant;nc|ENSG00000180316|Q8N8W4|PNPLA1;ENSG00000180316|ENST00000636260|PNPLA1	PNPLA1|p.D236N|1|0.21|ENSG00000180316|chr6:36294391-36294391|G/A|missense_variant	PNPLA1|p.D236N|1|0.21|ENSG00000180316|chr6:36294391-36294391|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	305.1589843630791	3	305.158196	912.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.14	1	102.31	101.81	102.81	0.17032								0	0	0	1.0178	1	42984	42984		1.8442	0.19162	1				22215	4543	11029	11076	25461	25461					-0.0069692517478188165
MTLACHGA	8	Unmodified	_MTLACHGA_					0	0	0			REV__ENSG00000175567|ENST00000663595|UCP2	REV__ENSG00000175567|ENST00000663595|UCP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1797973513603	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9719	1	9.7064	9.2064	10.206	0.73452								0	0	0	1.0178	1	3732	3732		0.69038	0.69038	1		+		22216	11155	11030	11077	25462	25462					-0.06250004011769761
MTLTSLISL	9	Oxidation (M)	_M(Oxidation (M))TLTSLISL_		M(1)TLTSLISL		M(67)TLTSLISL	0	0	1		ENST00000287912.7_1_7:155437535-155471332:+|nuORF	ENST00000287912.7_1_7:155437535-155471332:+|nuORF	ENST00000287912.7_1_7:155437535-155471332:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	994.5484496951103	1	994.54891	993.541634	2.5016	0.002488	1.6971	0.0016878	4.1987	0.0041758	994.5491014721849	75.908	0.37283	76.229	76.081	76.453	0.32163					15	11	2	0	0	0	0.051699	1	31728	31728		67.344	9.8725	1	1175700			22217	5718	11031	11078	25463	25463		100			0.04460445274230551
MTLTSLISL	9	Oxidation (M)	_M(Oxidation (M))TLTSLISL_		M(1)TLTSLISL		M(42)TLTSLISL	0	0	1		ENST00000287912.7_1_7:155437535-155471332:+|nuORF	ENST00000287912.7_1_7:155437535-155471332:+|nuORF	ENST00000287912.7_1_7:155437535-155471332:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5544921755791	1	994.54891	993.541634	3.3625	0.0033442	1.3321	0.0013249	4.6946	0.004669	994.5516057599126	74.541	0.44543	76.33	76.075	76.521	1.7896					28	13	3	0	0	0	0.12174	1	31269	31269		42.095	7.9921	1	2148400			22218	5718	11031	11078	25464	25464		100			0.04460445274230551
MTPEIIQKL	9	Unmodified	_MTPEIIQKL_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8084594607353	2	536.807185	1071.59982	2.003	0.0010752	4.4682	0.0023986	6.4712	0.0034738	536.8076094950097	46.638	0.3762	48.013	47.803	48.179	1.3751					33	11	4	0	0	0	0.15456	2	19499	19499;19550		38.176	16.429	1	3108600			22219	1697	11032	11079	25465;25466	25465					0.0668812691947096
MTPEIIQKL	9	Unmodified	_MTPEIIQKL_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8080322146416	2	536.807185	1071.59982	1.5635	0.00083929	3.8895	0.0020879	5.453	0.0029272	537.3116109695619	46.199	0.37325	48.169	47.973	48.347	1.9703					36	11	4	0	0	0	0.18809	1	19336	19336		34.402	12.655	1	2749400			22220	1697	11032	11079	25467	25467					0.0668812691947096
MTQRWQRRE	9	Unmodified	_MTQRWQRRE_					0	0	0		nc|ENSG00000172915|Q8NFP9-3|NBEA;nc|ENSG00000172915|Q8NFP9|NBEA;ENSG00000172915|ENST00000379939|NBEA	nc|ENSG00000172915|Q8NFP9-3|NBEA	nc|ENSG00000172915|Q8NFP9-3|NBEA	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4934	1	4.2387	3.7387	4.7387	0.74525								0	0	0	0.42693	1	1449	1449		0.23584	0.076522	1				22221	4260	11033	11080	25468	25468					0.007887007315275696
MTVEEIYK	8	Unmodified	_MTVEEIYK_					0	0	0		FLOT1|p.H162Qfs*44|1|0.1|ENSG00000137312|chr6:30740580-30740581|-/AC|frameshift_variant;FLOT1|p.S205Rfs*2|1|0.2|ENSG00000137312|chr6:30740266-30740267|-/T|frameshift_variant;ENSG00000137312|ENST00000376389|FLOT1;tr|A0A553SPN0|A0A553SPN0_NIACIFlotillinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26565PE=3SV=1	FLOT1|p.H162Qfs*44|1|0.1|ENSG00000137312|chr6:30740580-30740581|-/AC|frameshift_variant	FLOT1|p.H162Qfs*44|1|0.1|ENSG00000137312|chr6:30740580-30740581|-/AC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.1747924685478	3	338.172171	1011.49468	2.0591	0.00069633	3.7784	0.0012778	5.8375	0.0019741	338.1736791213933	85.614	0.40485	85.867	85.632	86.037	0.25227					25	12	3	0	0	0	0.88163	1	35796	35796		5.7319	1.203	1	1150300			22222	2765	11034	11081	25469	25469					-0.01060414276935262
MTVLIRLH	8	Unmodified	_MTVLIRLH_					0	0	0		ENST00000519231.5_1_8:66695020-66754180:-|nuORF	ENST00000519231.5_1_8:66695020-66754180:-|nuORF	ENST00000519231.5_1_8:66695020-66754180:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2001525759697	3	328.200395	981.579357	0.68792	0.00022577	-2.2959	-0.00075353	-1.608	-0.00052775	328.19957558819067	33.324	1.3482	33.621	33.307	34.656	0.29701					126	44	5	0	0	0	0.88587	1	14007	14007		3.5965	0	1	81250000			22223	7068	11035	11082	25470	25470					0.08783001050335315
MTVLIRLH	8	Unmodified	_MTVLIRLH_					0	0	0		ENST00000519231.5_1_8:66695020-66754180:-|nuORF	ENST00000519231.5_1_8:66695020-66754180:-|nuORF	ENST00000519231.5_1_8:66695020-66754180:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1996032595634	3	328.200395	981.579357	-0.63489	-0.00020837	-2.1807	-0.00071572	-2.8156	-0.00092409	328.19963786516615	32.144	0.68638	33.426	33.141	33.827	1.2813					82	23	5	0	0	0	0.88587	1	13513	13513		3.5965	0	1	112710000			22224	7068	11035	11082	25471	25471					0.08783001050335315
MTVTDKIQ	8	Unmodified	_MTVTDKIQ_					0	0	0			REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	935.4885131716728	1	935.486644	934.479368	2.3669	0.0022142	-1.6954	-0.001586	0.67151	0.00062819	935.485699754721	47.105	0.28502	48.488	48.314	48.599	1.3825					11	8	2	0	0	0	0.82039	1	19698	19698		19.439	2.4967	1	867530	+		22225	8445	11036	11083	25472	25472					0.00950718925878391
MTVTDKIQ	8	Unmodified	_MTVTDKIQ_					0	0	0			REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	935.486644	934.479368	2.3669	0.0022142	-1.6954	-0.001586	0.67151	0.00062819	935.485699754721	47.105	0.28502	48.488	48.314	48.599	1.3825	-0.076744	-0.00023262	NaN	19.439	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	867530	+		22226	8445	11036	11083							0.00950718925878391
MTVTDKIQ	8	Unmodified	_MTVTDKIQ_					0	0	0			REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	935.486644	934.479368	2.0941	0.001959	-1.2074	-0.0011295	0.88668	0.00082948	935.4856507801795	46.671	0.23778	48.641	48.503	48.741	1.9703	0.076744	0.0002239	NaN	19.439	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	675350	+		22227	8445	11036	11083							0.00950718925878391
MVAHFIASH	9	Unmodified	_MVAHFIASH_					0	0	0		ENST00000560524.1_1_15:29526351-29527221:-|nuORF	ENST00000560524.1_1_15:29526351-29527221:-|nuORF	ENST00000560524.1_1_15:29526351-29527221:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.1745483279228	3	338.172617	1011.49602	0.74657	0.00025247	2.5488	0.00086193	3.2954	0.0011144	338.1734610724505	84.641	0.52766	85.8	85.559	86.086	1.159					50	16	4	0	0	0	0.5697	1	35471	35471		8.1555	0	1	9381800			22228	7329	11037	11084	25473	25473					-0.009267353975133119
MVCGFLFPN	9	Unmodified	_MVCGFLFPN_					0	0	0		ZNF217|p.D429Gfs*2|1|0.07|ENSG00000171940|chr20:53581541-53581542|-/C|frameshift_variant;ZNF217|p.H454Pfs*4|1|0.19|ENSG00000171940|chr20:53581466-53581467|-/G|frameshift_variant;ENSG00000171940|ENST00000371471|ZNF217	ZNF217|p.D429Gfs*2|1|0.07|ENSG00000171940|chr20:53581541-53581542|-/C|frameshift_variant	ZNF217|p.D429Gfs*2|1|0.07|ENSG00000171940|chr20:53581541-53581542|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2397338747978	2	514.240624	1026.46669	2.7249	0.0014013	-3.2871	-0.0016904	-0.56219	-0.0002891	514.2390292060754	85.644	0.49671	85.896	85.54	86.037	0.25227					59	15	6	0	0	0	0.76456	1	35861	35861		4.756	1.8668	1	5698900			22229	4220	11038	11085	25474	25474					-0.04548015738009781
MVCVCDYS	8	Unmodified	_MVCVCDYS_					0	0	0			REV__ENSG00000121281|ENST00000673801|ADCY7;REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.7671081423759	2	460.171549	918.328546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.44	1	103.6	103.1	104.1	0.16445								0	0	0	1.0178	1	43605	43605		0.79363	0	1		+		22230	8789;9584	11039	11086	25475	25475					-0.13388507048796328
MVDELVLLL	9	Oxidation (M)	_M(Oxidation (M))VDELVLLL_		M(1)VDELVLLL		M(51)VDELVLLL	0	0	1		ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8041869997978	2	530.801568	1059.58858	4.1922	0.0022252	-0.47464	-0.00025194	3.7175	0.0019733	530.8012437214328	92.13	0.57816	93.067	92.83	93.408	0.93623					33	17	3	0	0	0	0.09539	2	38808	38808;38861		50.855	12.704	1	2124300			22231	4606	11040	11087	25476;25477	25476		78			0.06117304825352221
MVDELVLLL	9	Oxidation (M)	_M(Oxidation (M))VDELVLLL_		M(1)VDELVLLL		M(51)VDELVLLL	0	0	1		ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8041869997978	2	530.801568	1059.58858	3.4791	0.0018467	1.0204	0.00054164	4.4995	0.0023883	530.8022215925561	91.682	0.51271	93.009	92.86	93.373	1.3269					32	15	3	0	0	0	0.09539	2	38601	38601;38650		50.855	14.811	1	2204000			22232	4606	11040	11087	25478;25479	25478		78			0.06117304825352221
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(67)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	990.5531494021416	1	990.553995	989.546719	1.7614	0.0017448	-0.23354	-0.00023133	1.5279	0.0015135	990.5539609414643	79.686	0.52582	79.686	79.422	79.948	0					47	16	4	0	0	0	0.051699	4	33113	33113;33159;33212;33268		67.344	16.489	1	8154600			22233	5151	11041	11088	25480;25481;25482;25483	25480		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(60)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.7814819216728	2	495.780636	989.546719	1.4535	0.00072059	-2.3321	-0.0011562	-0.87869	-0.00043564	495.78057979533907	79.748	0.46449	79.748	79.422	79.887	0					31	14	3	0	0	0	0.069258	2	33201	33133;33201		60.39	13.469	1	4220700			22234	5151	11041	11088	25484;25485	25485		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(67)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	990.5589477419853	1	990.553995	989.546719	1.8709	0.0018532	0.32111	0.00031808	2.192	0.0021713	990.5545206462665	79.136	0.81956	79.437	79.217	80.037	0.30046					54	25	4	0	0	0	0.051699	4	33038	33038;33084;33123;33163		67.344	13.608	1	7985200			22235	5151	11041	11088	25486;25487;25488;25489	25486		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(54)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7814819216728	2	495.780636	989.546719	2.3641	0.0011721	-1.9498	-0.00096666	0.41434	0.00020542	495.7804287081812	79.243	0.46863	79.543	79.217	79.686	0.30047					32	14	3	0	0	0	0.087207	2	33053	33053;33114		53.576	15.424	1	4481200			22236	5151	11041	11088	25490;25491	25490		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(78)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	990.5567504763603	1	990.553995	989.546719	4.0377	0.0039996	-2.569	-0.0025448	1.4687	0.0014548	990.551753417236	78.082	1.0989	79.363	79.108	80.207	1.2809					90	35	4	0	0	0	0.03795	5	32914	32705;32801;32855;32914;32963		77.984	17.595	1	36358000			22237	5151	11041	11088	25492;25493;25494;25495;25496	25495		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(71)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7813903689384	2	495.780636	989.546719	2.5464	0.0012624	-2.6368	-0.0013073	-0.090418	-4.4828E-05	495.77974433108636	78.082	1.6288	79.363	79.108	80.737	1.2809					89	52	4	0	0	0	0.046276	2	32751	32751;32806		70.716	17.14	1	22134000			22238	5151	11041	11088	25497;25498	25497		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(78)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.5538207888603	1	990.553995	989.546719	1.8387	0.0018214	-2.1127	-0.0020927	-0.27398	-0.00027139	990.5520006491216	77.583	0.76544	79.334	79.136	79.901	1.7514					71	24	4	0	0	0	0.03795	5	32526	32479;32526;32577;32631;32676		77.984	17.595	1	25989000			22239	5151	11041	11088	25499;25500;25501;25502;25503	25500		92			0.051527491368574374
MVDGTLLLL	9	Oxidation (M)	_M(Oxidation (M))VDGTLLLL_		M(1)VDGTLLLL		M(60)VDGTLLLL	0	0	1		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7797729372978	2	495.780636	989.546719	1.2873	0.00063821	-2.7608	-0.0013687	-1.4735	-0.00073053	495.7796129702495	77.614	0.9523	79.366	79.105	80.057	1.7514					73	30	4	0	0	0	0.069258	2	32578	32525;32578		60.39	15.983	1	24310000			22240	5151	11041	11088	25504;25505	25505		92			0.051527491368574374
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5609008669853	1	974.559081	973.551804	2.5931	0.0025271	-1.4561	-0.0014191	1.1369	0.001108	974.5579129617819	86.186	0.5435	86.186	85.884	86.427	0					48	17	4	0	0	0	0.069258	3	35871	35828;35871;35922		60.39	8.3628	1	12262000			22241	5151	11041	11089	25506;25507;25508	25507					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7840759158134	2	487.783179	973.551804	2.565	0.0012512	-0.69221	-0.00033765	1.8728	0.00091353	487.7828976231691	86.162	0.42467	86.162	85.914	86.339	0					26	13	3	0	0	0	0.087207	2	35861	35861;35915		53.576	15.424	1	1914300			22242	5151	11041	11089	25509;25510	25509					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7844116091728	2	487.783179	973.551804	3.2965	0.001608	-0.52064	-0.00025396	2.7759	0.001354	487.7828892600706	85.583	0.40382	85.835	85.665	86.068	0.25227					27	12	3	0	0	0	0.087207	2	35755	35755;35810		53.576	9.1686	1	2666500			22243	5151	11041	11089	25511;25512	25511					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5643798708916	1	974.559081	973.551804	2.6062	0.0025399	1.1571	0.0011277	3.7633	0.0036676	974.5602536549201	85.615	0.49944	85.867	85.601	86.1	0.25227					48	15	4	0	0	0	0.069258	2	35853	35813;35853		60.39	6.814	1	15395000			22244	5151	11041	11089	25513;25514	25514					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7844116091728	2	487.783179	973.551804	2.0761	0.0010127	1.3665	0.00066657	3.4427	0.0016793	487.78405707108766	84.73	0.68376	85.889	85.434	86.118	1.159					53	21	4	0	0	0	0.087207	3	35529	35529;35568;35628		53.576	9.1686	1	25186000			22245	5151	11041	11089	25515;25516;25517	25515					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5634033083916	1	974.559081	973.551804	1.9829	0.0019325	4.0305	0.0039279	6.0134	0.0058604	974.5633851581014	84.186	0.94112	85.824	85.501	86.442	1.6379					45	30	2	0	0	0	0.069258	3	35259	35259;35297;35348		60.39	9.5345	1	98618000			22246	5151	11041	11089	25518;25519;25520	25518					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7857238650322	2	487.783179	973.551804	2.1869	0.0010667	0.42773	0.00020864	2.6147	0.0012754	487.7836142999381	84.217	0.63933	85.814	85.486	86.126	1.5962					53	20	4	0	0	0	0.069258	3	35388	35284;35336;35388		60.39	15.983	1	34542000			22247	5151	11041	11089	25521;25522;25523	25523					0.06397052999466268
MVDGTLLLL	9	Unmodified	_MVDGTLLLL_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	974.559081	973.551804	2.3959	0.002335	1.4754	0.0014379	3.8713	0.0037729	974.556129946026	85.22	0.166	86.379	86.303	86.469	1.159	0.096035	0.00278	NaN	60.39	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1533100			22248	5151	11041	11089							0.06397052999466268
MVDLGTYTL	9	Unmodified	_MVDLGTYTL_					0	0	0			REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7570373415947	2	506.754618	1011.49468	2.2893	0.0011601	3.3479	0.0016966	5.6372	0.0028567	506.7562269464156	84.669	0.34126	85.828	85.622	85.964	1.159					25	10	3	0	0	0	0.27148	1	35507	35507		26.884	0	1	5084800	+		22249	15057	11042	11090	25524	25524					-0.010604142769125247
MVDLGTYTL	9	Unmodified	_MVDLGTYTL_					0	0	0			REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.1737853884697	3	338.172171	1011.49468	1.67	0.00056474	1.1353	0.00038394	2.8053	0.00094868	338.17231121022496	84.163	0.76347	85.801	85.559	86.322	1.6379					51	24	4	0	0	0	0.19075	1	35287	35287		24.991	8.8419	1	9203700	+		22250	15057	11042	11090	25525	25525					-0.010604142769125247
MVDLGTYTL	9	Unmodified	_MVDLGTYTL_					0	0	0			REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	506.754618	1011.49468	2.8141	0.0014261	3.2654	0.0016548	6.0795	0.0030808	506.7561072620084	86.145	0.18262	86.145	86.008	86.191	0	0.2355	-0.00012868	NaN	26.884	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535540	+		22251	15057	11042	11090							-0.010604142769125247
MVDLGTYTL	9	Unmodified	_MVDLGTYTL_					0	0	0			REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	REV__tr|A0A553SNK0|A0A553SNK0_NIACIUPF0344proteinCEQ21_24640OS=NialliacirculansOX=1397GN=CEQ21_24640PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	506.754618	1011.49468	2.8834	0.0014612	3.8925	0.0019725	6.7759	0.0034337	506.7561568829246	85.618	0.2795	85.87	85.695	85.975	0.25227	-0.039472	0.0005069	NaN	26.884	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550740	+		22252	15057	11042	11090							-0.010604142769125247
MVEGFFDR	8	Oxidation (M)	_M(Oxidation (M))VEGFFDR_		M(1)VEGFFDR		M(100)VEGFFDR	0	0	1		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.7299987673759	2	508.728935	1015.44332	1.6557	0.00084229	-0.19241	-9.7882E-05	1.4633	0.00074441	508.7289703674862	33.642	0.68042	33.642	33.328	34.008	0					54	21	4	0	0	0	0.065974	3	14134	14028;14080;14134		99.799	65.697	1	8361600			22253	3217	11043	11091	25526;25527;25528	25528		57			-0.06378738250975857
MVEGFFDR	8	Oxidation (M)	_M(Oxidation (M))VEGFFDR_		M(1)VEGFFDR		M(69)VEGFFDR	0	0	1		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.7300598025322	2	508.728935	1015.44332	1.5201	0.00077333	0.23415	0.00011912	1.7543	0.00089246	508.7290774909929	33.135	0.46958	33.429	33.227	33.696	0.29431					38	15	3	0	0	0	0.33037	2	13910	13910;13952		69.105	38.88	1	2242800			22254	3217	11043	11091	25529;25530	25529		57			-0.06378738250975857
MVEGFFDR	8	Oxidation (M)	_M(Oxidation (M))VEGFFDR_		M(1)VEGFFDR		M(44)VEGFFDR	0	0	1		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7297851443291	2	508.728935	1015.44332	1.0281	0.00052304	-1.324	-0.00067355	-0.29586	-0.00015051	508.7284374259453	31.62	0.31575	33.444	33.155	33.47	1.8246					16	10	2	0	0	0	0.55655	1	13223	13223		43.772	11.467	1	1013300			22255	3217	11043	11091	25531	25531		57			-0.06378738250975857
MVEPHRML	8	Unmodified	_MVEPHRML_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7574645876884	2	506.756972	1011.49939	2.8141	0.0014261	-1.3801	-0.00069936	1.434	0.0007267	506.7561072620084	86.145	0.18262	86.145	86.008	86.191	0					8	5	2	0	0	0	0.88163	1	35903	35903		2.8892	0	1	535540	+		22256	11043	11044	11092	25532	25532					-0.005898086151432835
MVEPHRML	8	Unmodified	_MVEPHRML_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7564880251884	2	506.756972	1011.49939	2.8834	0.0014612	-0.75295	-0.00038157	2.1304	0.0010796	506.7561568829246	85.618	0.2795	85.87	85.695	85.975	0.25227					14	8	2	0	0	0	0.87701	1	35797	35797		5.2307	0	1	550740	+		22257	11043	11044	11092	25533	25533					-0.005898086151432835
MVEPHRML	8	Unmodified	_MVEPHRML_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.1736328005791	3	338.17374	1011.49939	0.74657	0.00025247	-0.77379	-0.00026168	-0.027227	-9.2075E-06	338.1734610724505	84.641	0.52766	85.8	85.559	86.086	1.159					50	16	4	0	0	0	0.84677	1	35519	35519		17.113	4.5813	1	9381800	+		22258	11043	11044	11092	25534	25534					-0.005898086151432835
MVEPHRML	8	Unmodified	_MVEPHRML_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	338.17374	1011.49939	-0.7205	-0.00024365	0.99886	0.00033779	0.27836	9.4135E-05	338.1740521925957	86.119	0.29961	86.119	86.008	86.308	0	0.19048	0.0012095	NaN	17.113	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776050	+		22259	11043	11044	11092							-0.005898086151432835
MVEPHRML	8	Unmodified	_MVEPHRML_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	338.17374	1011.49939	0.74657	0.00025247	-0.77379	-0.00026168	-0.027227	-9.2075E-06	338.1734610724505	84.641	0.52766	85.8	85.559	86.086	1.159	-0.12872	-0.00058889	NaN	17.113	50	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9381800	+		22260	11043	11044	11092							-0.005898086151432835
MVFHYMSI	8	Unmodified	_MVFHYMSI_					0	0	0		nc|ENSG00000122986|Q96D96-2|HVCN1;nc|ENSG00000122986|Q96D96-4|HVCN1;nc|ENSG00000122986|Q96D96-3|HVCN1;ENSG00000122986|ENST00000242607|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	nc|ENSG00000122986|Q96D96-2|HVCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2410156130791	2	514.240624	1026.46669	2.7249	0.0014013	-3.2871	-0.0016904	-0.56219	-0.0002891	514.2390292060754	85.644	0.49671	85.896	85.54	86.037	0.25227					59	15	6	0	0	0	0.86202	1	35754	35754		15.768	2.2603	1	5698900			22261	2177	11045	11093	25535	25535					-0.045480157379870434
MVHWKNQF	8	Unmodified	_MVHWKNQF_					0	0	0		nc|ENSG00000087085|P22303-3|ACHE;ENSG00000087085|ENST00000241069|ACHE	nc|ENSG00000087085|P22303-3|ACHE	nc|ENSG00000087085|P22303-3|ACHE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2667724490166	2	545.268561	1088.52257	0.5593	0.00030497	0.3011	0.00016418	0.8604	0.00046915	545.2666347799574	53.11	0.32	54.511	54.313	54.633	1.4005					16	9	3	0	0	0	0.86202	2	22218	22218;22271		15.768	1.1865	1	4815600			22262	1081	11046	11094	25536;25537	25536					-0.018150465061808063
MVKILAPIL	9	Unmodified	_MVKILAPIL_					0	0	0		ENST00000396061.5_1_15:59931326-59934343:-|nuORF	ENST00000396061.5_1_15:59931326-59934343:-|nuORF	ENST00000396061.5_1_15:59931326-59934343:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3316833376884	2	499.327556	996.64056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.13	1	101.32	100.82	101.82	0.19155								0	0	0	0.42693	1	42523	42523		0.52476	0	1				22263	6298	11047	11095	25538	25538					0.14210513029752292
MVKKKRRRKR	10	Unmodified	_MVKKKRRRKR_					0	0	0			REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	693.4587280154228	2	693.459156	1384.90376	2.6912	0.0018662	-2.6237	-0.0018194	0.067503	4.6811E-05	693.4574931055103	107.29	0.19299	107.35	107.22	107.42	0.052452					14	8	2	0	0	0	0.89803	1	45858	45858		0.40072	0.40072	1	24167000	+		22264	8301	11048	11096	25539	25539					0.22670366257966634
MVKKKRRRKR	10	Unmodified	_MVKKKRRRKR_					0	0	0			REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	693.4587280154228	2	693.459156	1384.90376	2.7795	0.0019275	-2.6988	-0.0018715	0.080666	5.5939E-05	693.4568764356819	107.25	0.21041	107.4	107.3	107.51	0.15781					25	10	3	0	0	0	0.89803	1	46071	46071		0.40072	0.40072	1	250690000	+		22265	8301	11048	11096	25540	25540					0.22670366257966634
MVKKKRRRKR	10	Unmodified	_MVKKKRRRKR_					0	0	0			REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	693.459156	1384.90376	1.4371	0.0009966	-1.3658	-0.00094714	0.071328	4.9463E-05	693.4584192932444	107.29	0.22194	107.29	107.21	107.43	0	-0.068881	0.0017414	NaN	0.40072	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28373000	+		22266	8301	11048	11096							0.22670366257966634
MVKKKRRRKR	10	Unmodified	_MVKKKRRRKR_					0	0	0			REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	693.459156	1384.90376	2.6912	0.0018662	-2.6237	-0.0018194	0.067503	4.6811E-05	693.4574931055103	107.29	0.19299	107.35	107.22	107.42	0.052452	-0.0086812	-3.2539E-06	NaN	0.40072	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24167000	+		22267	8301	11048	11096							0.22670366257966634
MVKKKRRRKR	10	Unmodified	_MVKKKRRRKR_					0	0	0			REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	REV__chr2:231708751-231711956|346|475.97|0.46|10.02|+|1|PTMA,None|2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	693.459156	1384.90376	2.7795	0.0019275	-2.6988	-0.0018715	0.080666	5.5939E-05	693.4568764356819	107.25	0.21041	107.4	107.3	107.51	0.15781	0.050242	-0.00010745	NaN	0.40072	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250690000	+		22268	8301	11048	11096							0.22670366257966634
MVKLLHKSAPA	11	Unmodified	_MVKLLHKSAPA_					0	0	0		nc|ENSG00000131507|Q9BT67-2|NDFIP1	nc|ENSG00000131507|Q9BT67-2|NDFIP1	nc|ENSG00000131507|Q9BT67-2|NDFIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.9079467654228	3	398.905759	1193.69545	0.52903	0.00021103	3.356	0.0013387	3.885	0.0015497	398.9071125095255	91.849	0.41125	91.849	91.597	92.008	0					22	12	3	0	0	0	1.0131	1	38383	38383		1.2148	0.25256	1	949660			22269	7872	11049	11097	25541	25541					0.10634899830392897
MVLAAGLRKQ	10	Unmodified	_MVLAAGLRKQ_					0	0	0		ENST00000585803.1_1_18:57863810-57864818:+|nuORF;nc|ENSG00000110768|P32780-2|GTF2H1;ENST00000418116.6_1_11:18344284-18382305:+|nuORF;ENSG00000110768|ENST00000265963|GTF2H1	ENST00000585803.1_1_18:57863810-57864818:+|nuORF	ENST00000585803.1_1_18:57863810-57864818:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2533447146416	3	362.886588	1085.63793	0.8819	0.00032003	1.9221	0.00069751	2.804	0.0010175	362.88731280617276	29.891	0.2108	30.177	30.024	30.235	0.2859					9	6	2	0	0	0	0.12555	1	12487	12487		0.77653	0.50751	1	824380			22270	1717	11050	11098	25542	25542					0.09854057624806956
MVLETEYK	8	Unmodified	_MVLETEYK_					0	0	0			REV__ENST00000411618.1_1_9:30800054-30800297:-|nuORF	REV__ENST00000411618.1_1_9:30800054-30800297:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.1732360720634	3	338.172171	1011.49468	1.67	0.00056474	1.1353	0.00038394	2.8053	0.00094868	338.17231121022496	84.163	0.76347	85.801	85.559	86.322	1.6379					51	24	4	0	0	0	0.80889	1	35340	35340		16.149	0	1	9203700	+		22271	12920	11051	11099	25543	25543					-0.010604142769238933
MVMLFRSL	8	Unmodified	_MVMLFRSL_					0	0	0			REV__nc|ENSG00000051108|Q15011-4|HERPUD1	REV__nc|ENSG00000051108|Q15011-4|HERPUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7759582400322	2	498.772091	995.529629	2.0188	0.0010069	1.8202	0.00090785	3.8389	0.0019148	498.77307722070134	84.21	0.51631	85.816	85.527	86.043	1.6063					33	16	4	0	0	0	0.62161	1	35275	35275		38.151	3.9638	1	9332700	+		22272	8624	11052	11100	25544	25544					0.031685500500316266
MVNKVLVRHR	10	Unmodified	_MVNKVLVRHR_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6925231814384	4	313.692121	1250.73938	0.46248	0.00014508	1.75	0.00054896	2.2125	0.00069404	313.6925895170379	30.427	0.73331	30.713	30.501	31.234	0.2859					103	24	5	0	0	0	0.89803	1	12915	12915		0.62683	0	1	22074000			22273	5084	11053	11101	25545	25545					0.1240392904737746
MVPMHGVLL	9	Unmodified	_MVPMHGVLL_					0	0	0			REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	REV__ENST00000523711.5_1_8:1824717-1874701:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7739745974541	2	498.772091	995.529629	2.0188	0.0010069	1.8202	0.00090785	3.8389	0.0019148	498.77307722070134	84.21	0.51631	85.816	85.527	86.043	1.6063					33	16	4	0	0	0	0.24585	1	35324	35324		28.173	1.832	1	9332700	+		22274	9144	11054	11102	25546	25546					0.03168550050054364
MVRILRTV	8	Unmodified	_MVRILRTV_					0	0	0		ENST00000511500.1_1_5:119016267-119016600:+|nuORF;ENSG00000159111|ENST00000351111|MRPL10;nc|ENSG00000159111|Q7Z7H8-2|MRPL10	ENST00000511500.1_1_5:119016267-119016600:+|nuORF	ENST00000511500.1_1_5:119016267-119016600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3084594607353	2	494.310229	986.605906	1.351	0.00066782	-4.4753	-0.0022122	-3.1243	-0.0015444	494.30865497124864	38.841	0.29131	40.678	40.525	40.817	1.8366					17	8	3	0	0	0	0.80415	1	16310	16310		20.871	3.9289	1	1318600			22275	3516	11055	11103	25547	25547					0.11206689941673176
MVTRVMFL	8	Unmodified	_MVTRVMFL_					0	0	0		SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant;ENSG00000088386|ENST00000376503|SLC15A1	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.7743713259697	2	498.772091	995.529629	1.987	0.00099104	2.2745	0.0011345	4.2615	0.0021255	498.77306907957757	84.722	0.43073	85.881	85.687	86.118	1.159					23	13	3	0	0	0	0.59872	2	35505	35505;35557		40.449	4.4044	1	8798400			22276	1102	11056	11104	25548;25549	25548					0.031685500500316266
MVTRVMFL	8	Unmodified	_MVTRVMFL_					0	0	0		SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant;ENSG00000088386|ENST00000376503|SLC15A1	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	498.772091	995.529629	2.4358	0.0012149	3.1785	0.0015853	5.6143	0.0028002	498.7727445974795	86.123	0.29961	86.123	86.008	86.308	0	0.20567	0.0008827	NaN	40.449	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	743410			22277	1102	11056	11104							0.031685500500316266
MVTRVMFL	8	Unmodified	_MVTRVMFL_					0	0	0		SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant;ENSG00000088386|ENST00000376503|SLC15A1	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	SLC15A1|p.L386Kfs*7|1|0.18|ENSG00000088386|chr13:98706224-98706248|GTTTCCTTTGGGGAAGACTGGAAGA/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	498.772091	995.529629	3.1753	0.0015838	2.8737	0.0014333	6.049	0.0030171	498.7731131317971	85.598	0.31057	85.85	85.695	86.006	0.25227	-0.067559	0.00057866	NaN	40.449	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802170			22278	1102	11056	11104							0.031685500500316266
MVVDIVQEL	9	Oxidation (M)	_M(Oxidation (M))VVDIVQEL_		M(1)VVDIVQEL		M(85)VVDIVQEL	0	0	1		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2827026247978	2	531.281	1060.54745	3.145	0.0016709	0.21574	0.00011462	3.3608	0.0017855	531.281072863452	64.81	0.62515	66.217	65.954	66.579	1.4071					34	19	2	0	0	0	0.031377	2	27152	27152;27197		85.272	20.279	1	7520500			22279	3547	11057	11105	25550;25551	25550		61			0.019595437858924925
MVVDIVQEL	9	Oxidation (M)	_M(Oxidation (M))VVDIVQEL_		M(1)VVDIVQEL		M(96)VVDIVQEL	0	0	1		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2829467654228	2	531.281	1060.54745	2.6334	0.0013991	0.63152	0.00033552	3.2649	0.0017346	531.2813737420679	64.269	0.72835	66.197	65.981	66.709	1.928					35	22	2	0	0	0	0.023786	2	27003	26950;27003		96.285	21.862	1	8853700			22280	3547	11057	11105	25552;25553	25553		61			0.019595437858924925
MVVEISRSF	9	Unmodified	_MVVEISRSF_					0	0	0		nc|ENSG00000121690|Q96QD5-2|DEPDC7;ENSG00000121690|ENST00000241051|DEPDC7	nc|ENSG00000121690|Q96QD5-2|DEPDC7	nc|ENSG00000121690|Q96QD5-2|DEPDC7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.2788574099541	2	534.281334	1066.54812	3.2014	0.0017105	-4.2386	-0.0022646	-1.0372	-0.00055413	534.2789393593207	73.835	0.67311	75.631	75.409	76.082	1.7962					56	21	3	0	0	0	0.51189	1	31038	31038		14.838	1.7958	1	5506300			22281	2136	11058	11106	25554	25554					0.017503832255897578
MVVRCYLL	8	Unmodified	_MVVRCYLL_					0	0	0		nc|ENSG00000141449|Q9C091-3|GREB1L;ENSG00000141449|ENST00000424526|GREB1L;ENST00000578955.1_1_18:19057140-19088617:+|nuORF	nc|ENSG00000141449|Q9C091-3|GREB1L	nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7735168337822	2	498.772091	995.529629	2.0188	0.0010069	1.8202	0.00090785	3.8389	0.0019148	498.77307722070134	84.21	0.51631	85.816	85.527	86.043	1.6063					33	16	4	0	0	0	0.66111	1	35392	35392		34.187	6.0141	1	9332700			22282	2959	11059	11107	25555	25555					0.031685500500316266
MVYGGVRIV	9	Unmodified	_MVYGGVRIV_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2828857302666	2	497.281137	992.547722	2.304	0.0011457	-0.82127	-0.0004084	1.4827	0.00073731	497.2809378542223	40.837	0.31398	42.163	42.054	42.368	1.3254					24	9	3	0	0	0	0.27148	2	17158	17110;17158		26.884	7.4447	1	2650800			22283	4962	11060	11108	25556;25557	25557					0.051150082963886234
MVYGGVRIV	9	Unmodified	_MVYGGVRIV_					0	0	0		nc|ENSG00000196730|P53355-4|DAPK1;ENSG00000196730|ENST00000408954|DAPK1;nc|ENSG00000196730|P53355-3|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	nc|ENSG00000196730|P53355-4|DAPK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2820922732353	2	497.281137	992.547722	2.0318	0.0010104	-0.91304	-0.00045404	1.1187	0.00055632	497.28057972269374	40.485	0.31425	42.348	42.171	42.485	1.8624					21	9	3	0	0	0	0.19075	2	16988	16940;16988		34.102	14.663	1	2604600			22284	4962	11060	11108	25558;25559	25559					0.051150082963886234
MWEQEEEMQE	10	Unmodified	_MWEQEEEMQE_					0	0	0		ENST00000567652.1_3_15:28798864-28806522:+|nuORF;nc|ENSG00000227717|P0DX01|GOLGA6L25;nc|ENSG00000237850|P0DX00|GOLGA6L24	ENST00000567652.1_3_15:28798864-28806522:+|nuORF	ENST00000567652.1_3_15:28798864-28806522:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.8416931033134	3	456.840932	1367.50097	0.73445	0.00033553	1.5815	0.00072249	2.3159	0.001058	456.8418863360076	9.9718	1.277	10.05	9.5609	10.838	0.077971					109	47	3	0	0	0	0.89803	1	4243	4243		1.4551	0.12547	1	1303400			22285	7366	11061	11109	25560	25560					-0.16808308898384894
MWLLLWKWYLV	11	Unmodified	_MWLLLWKWYLV_					0	0	0			REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.7958251833916	3	517.624593	1549.85195	1.732	0.00089652	0.96169	0.0004978	2.6937	0.0013943	517.625634247495	83.693	0.54877	84.88	84.704	85.253	1.1879					26	17	2	0	0	0	0.14606	1	35113	35113		0	0	1	913010	+		22286	12133	11062	11110	25561	25561					0.09901765000836349
MWLLLWKWYLV	11	Unmodified	_MWLLLWKWYLV_					0	0	0			REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.7989990115166	3	517.624593	1549.85195	1.6772	0.00086817	0.2059	0.00010658	1.8831	0.00097475	517.6249753386363	55.506	1.6811	56.916	55.385	57.066	1.4099					81	56	2	0	0	0	0.14606	1	22913	22913		2.8433	1.6285	1	2374200	+		22287	12133	11062	11110	25562	25562					0.09901765000836349
MWLLLWKWYLV	11	Unmodified	_MWLLLWKWYLV_					0	0	0			REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	REV__ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.3256713747978	3	517.624593	1549.85195	2.4076	0.0012462	0.14764	7.6421E-05	2.5552	0.0013226	517.6251312434814	70.2	4.1012	71.554	68.275	72.376	1.3536					195	132	2	0	0	0	0.14606	1	28785	28785		7.9454	5.5106	1	1901200	+		22288	12133	11062	11110	25563	25563					0.09901765000836349
MWLTRWCKEPW	11	Unmodified	_MWLTRWCKEPW_					0	0	0		ENST00000441947.1_1_21:46720298-46720370:-|nuORF	ENST00000441947.1_1_21:46720298-46720370:-|nuORF	ENST00000441947.1_1_21:46720298-46720370:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	768.3710204958916	2	768.36795	1534.72135	1.9647	0.0015096	2.1722	0.001669	4.1368	0.0031786	768.3696144925161	76.548	0.37479	77.842	77.639	78.014	1.2938					36	11	4	0	0	0	0.85967	1	32153	32153		12.241	1.4167	1	7591800			22289	6559	11063	11111	25564	25564					-0.024625739896691812
MWSPTHPALF	10	Oxidation (M)	_M(Oxidation (M))WSPTHPALF_		M(1)WSPTHPALF		M(78)WSPTHPALF	0	0	1		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.7886230349541	2	601.786784	1201.55902	1.5418	0.00092781	0.19176	0.0001154	1.7335	0.0010432	601.7866399280341	54.072	0.47814	55.476	55.229	55.707	1.4048					40	15	3	0	0	0	0.051733	3	22620	22570;22620;22670		78.149	51.266	1	2376500			22290	962	11064	11112	25565;25566;25567	25566		18			-0.03370214400160876
MWSPTHPALF	10	Oxidation (M)	_M(Oxidation (M))WSPTHPALF_		M(1)WSPTHPALF		M(52)WSPTHPALF	0	0	1		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	601.7878295779228	2	601.786784	1201.55902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.64	1	55.61	55.11	56.11	1.9697								0	0	0	0.022439	1	22473	22473		52.268	33.011	1				22291	962	11064	11112	25568	25568		18			-0.03370214400160876
MWSPTHPALF	10	Unmodified	_MWSPTHPALF_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.7906371951103	2	593.789327	1185.5641	3.264	0.0019381	-0.2856	-0.00016958	2.9784	0.0017686	593.7889203836932	60.881	0.57064	62.301	61.995	62.565	1.4196					52	17	4	0	0	0	0.052892	4	25510	25465;25510;25559;25602		100.37	60.414	1	7010300			22292	962	11064	11113	25569;25570;25571;25572	25570					-0.021259105375293075
MWSPTHPALF	10	Unmodified	_MWSPTHPALF_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.7897827029228	2	593.789327	1185.5641	3.3421	0.0019845	-0.075521	-4.4844E-05	3.2666	0.0019397	593.7891467004131	60.296	0.53751	62.262	62.008	62.546	1.9653					50	16	4	0	0	0	0.051733	3	25364	25265;25312;25364		108	64.139	1	7082400			22293	962	11064	11113	25573;25574;25575	25575					-0.021259105375293075
MWSVYNNI	8	Unmodified	_MWSVYNNI_					0	0	0			REV__tr|A0A7D6VQ68|A0A7D6VQ68_9CLOTViralA-typeinclusionproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01500PE=4SV=1	REV__tr|A0A7D6VQ68|A0A7D6VQ68_9CLOTViralA-typeinclusionproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01500PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7385131716728	2	513.739302	1025.46405	2.2225	0.0011418	-2.9725	-0.0015271	-0.74999	-0.0003853	513.7374792229202	67.762	0.41751	69.139	68.977	69.394	1.3778					44	13	5	0	0	0	0.84871	1	28480	28480		16.942	1.0951	1	4759100	+		22294	15375	11065	11114	25576	25576					-0.04766147871305293
MWVIIHEK	8	Unmodified	_MWVIIHEK_					0	0	0			REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	REV__ENST00000244040.3_1_20:56934856-56935048:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	352.5271179080009	3	352.5284	1054.56337	-2.298	-0.0008101	-1.2595	-0.00044401	-3.5574	-0.0012541	352.52792978324436	14.673	0.30907	14.673	14.534	14.843	0					14	9	2	0	0	0	0.84871	1	6098	6098		13.042	0	1	1314100	+		22295	12127	11066	11115	25577	25577					0.038272948134363105
MYDSFWRQF	9	Oxidation (M)	_M(Oxidation (M))YDSFWRQF_		M(1)YDSFWRQF		M(110)YDSFWRQF	0	0	1		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.2802612185478	2	648.279323	1294.54409	1.1513	0.00074639	2.0464	0.0013267	3.1978	0.0020731	648.2798639996822	58.725	0.37815	60.143	59.941	60.319	1.4181					31	11	4	0	0	0	0.007852	2	24578	24578;24632		111.29	88.139	1	2605600			22296	1003	11067	11116	25578;25579	25578		19			-0.0913970626813807
MYDSFWRQF	9	Oxidation (M)	_M(Oxidation (M))YDSFWRQF_		M(1)YDSFWRQF		M(120)YDSFWRQF	0	0	1		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.2805053591728	2	648.279323	1294.54409	1.976	0.001281	0.31014	0.00020106	2.2861	0.0014821	648.2793442861887	59.1	0.60596	60.52	60.32	60.926	1.4196					40	19	3	0	0	0	0.0060384	1	24771	24771		118.07	94.048	1	2733300			22297	1003	11067	11116	25580	25580		19			-0.0913970626813807
MYDSFWRQF	9	Oxidation (M)	_M(Oxidation (M))YDSFWRQF_		M(1)YDSFWRQF		M(140)YDSFWRQF	0	0	1		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.2806884646416	2	648.279323	1294.54409	1.1314	0.00073348	1.5673	0.0010161	2.6987	0.0017495	648.2798256171427	58.101	0.46963	60.07	59.931	60.401	1.969					32	14	4	0	0	0	0.00026547	2	24418	24372;24418		139.14	112.25	1	3678100			22298	1003	11067	11116	25581;25582	25582		19			-0.0913970626813807
MYDSFWRQF	9	Oxidation (M)	_M(Oxidation (M))YDSFWRQF_		M(1)YDSFWRQF		M(130)YDSFWRQF	0	0	1		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.2808715701103	2	648.279323	1294.54409	2.0332	0.0013181	-0.49576	-0.00032139	1.5375	0.00099671	648.2787409890587	58.62	0.50259	60.589	60.342	60.844	1.969					37	16	3	0	0	0	0.0022704	2	24587	24587;24670		129.77	99.136	1	3928400			22299	1003	11067	11116	25583;25584	25583		19			-0.0913970626813807
MYDSFWRQF	9	Unmodified	_MYDSFWRQF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.2838012576103	2	640.281866	1278.54918	2.7236	0.0017439	-1.146	-0.00073376	1.5776	0.0010101	640.2812824421884	64.562	0.33911	65.97	65.74	66.079	1.4071					41	10	5	0	0	0	2.6424E-05	3	27033	27033;27079;27119		166.45	135.81	1	13982000			22300	1003	11067	11117	25585;25586;25587	25585					-0.0789540240552924
MYDSFWRQF	9	Unmodified	_MYDSFWRQF_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1;ENST00000520364.1_1_6:109309715-109314184:-|nuORF	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.2839233279228	2	640.281866	1278.54918	2.5038	0.0016031	-1.3756	-0.00088079	1.1281	0.00072232	640.2811248774434	63.993	0.34367	65.921	65.733	66.077	1.928					41	10	5	0	0	0	2.6424E-05	3	26856	26811;26856;26896		166.45	130.4	1	14518000			22301	1003	11067	11117	25588;25589;25590	25589					-0.0789540240552924
MYEDEMDFTK	10	Unmodified	_MYEDEMDFTK_					0	0	0			REV__ENSG00000214013|ENST00000318010|GANC	REV__ENSG00000214013|ENST00000318010|GANC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.6843749880791	4	327.883524	1307.50499	-3.1847	-0.0010442	-1.9524	-0.00064015	-5.137	-0.0016844	328.13436591597844	13.554	0.30787	13.554	13.424	13.732	0					13	9	2	0	0	0	0.12557	1	5600	5600		1.5923	0.52082	1	239120	+		22302	11846	11068	11118	25591	25591					-0.13646219404699877
MYIFKQPHF	9	Unmodified	_MYIFKQPHF_					0	0	0		FLAD1-PHYHD1|2|fusion;PPP2R4-PHYHD1|5|fusion;ENSG00000175287|ENST00000372592|PHYHD1;PPP2R4-PHYHD1|2|fusion;FLAD1-PHYHD1|5|fusion	FLAD1-PHYHD1|2|fusion	FLAD1-PHYHD1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.2078124880791	3	404.207438	1209.60049	1.2377	0.0005003	-0.22776	-9.2062E-05	1.01	0.00040824	404.20736888786337	42.942	0.31658	44.282	44.108	44.425	1.3399					22	9	3	0	0	0	0.57699	1	18032	18032		12.241	6.9438	1	1273800			22303	4365	11069	11119	25592	25592					0.004069663591963035
MYIIPVVLF	9	Unmodified	_MYIIPVVLF_					0	0	0		ENSG00000161671|ENST00000334976|EMC10	ENSG00000161671|ENST00000334976|EMC10	ENSG00000161671|ENST00000334976|EMC10	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8218871951103	2	547.819564	1093.62458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.969	1	99.166	98.666	99.666	0.19767								0	0	0	0.089993	1	41666	41666		36.466	15.595	1				22304	3597	11070	11120	25593	25593					0.08150806792855292
MYPDQVQLL	9	Unmodified	_MYPDQVQLL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7816650271416	2	553.781167	1105.54778	2.7579	0.0015272	-0.21354	-0.00011825	2.5443	0.001409	553.7810209722134	62.218	0.38287	63.636	63.396	63.779	1.4177					28	11	3	0	0	0	0.073578	2	26060	26060;26112		58.679	19.296	1	4427800			22305	2648	11071	11121	25594;25595	25594					-0.0007703649425820913
MYPDQVQLL	9	Unmodified	_MYPDQVQLL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7819702029228	2	553.781167	1105.54778	2.4338	0.0013478	-0.3452	-0.00019117	2.0885	0.0011566	553.7812706102708	61.684	0.38256	63.641	63.4	63.783	1.9571					28	11	3	0	0	0	0.11643	2	25886	25840;25886		43.858	9.4566	1	4224200			22306	2648	11071	11121	25596;25597	25597					-0.0007703649425820913
MYPDVFAHF	9	Unmodified	_MYPDVFAHF_					0	0	0		ENST00000528224.1_1_11:66616372-66617354:-|nuORF;ENSG00000173599|ENST00000393960|PC	ENST00000528224.1_1_11:66616372-66617354:-|nuORF	ENST00000528224.1_1_11:66616372-66617354:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7584716677666	2	563.754953	1125.49535	3.1301	0.0017646	1.085	0.0006117	4.2152	0.0023763	563.7561766429911	64.348	0.30106	65.755	65.622	65.923	1.4071					15	9	2	0	0	0	0.13437	1	27023	27023		40.449	27.917	1	1367600			22307	4290	11072	11122	25598	25598					-0.06237574837223292
MYPDVFAHF	9	Unmodified	_MYPDVFAHF_					0	0	0		ENST00000528224.1_1_11:66616372-66617354:-|nuORF;ENSG00000173599|ENST00000393960|PC	ENST00000528224.1_1_11:66616372-66617354:-|nuORF	ENST00000528224.1_1_11:66616372-66617354:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7562133669853	2	563.754953	1125.49535	2.9591	0.0016682	1.027	0.00057896	3.9861	0.0022472	563.7561936035578	63.835	0.399	65.763	65.551	65.95	1.928					26	12	3	0	0	0	0.098957	1	26788	26788		49.669	31.534	1	1881900			22308	4290	11072	11122	25599	25599					-0.06237574837223292
MYPLEGSR	8	Unmodified	_MYPLEGSR_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1549865603447	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.082	1	22.082	21.582	22.582	0								0	0	0	1.0178	1	9184	9184		0.35063	0.081612	1				22309	4158	11073	11123	25600	25600					-0.029264343883596666
MYPLEGSR	8	Unmodified	_MYPLEGSR_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1545287966728	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.452	1	22.452	21.952	22.952	0								0	0	0	1.0178	1	9339	9339		0.35063	0.081612	1				22310	4158	11073	11123	25601	25601					-0.029264343883596666
MYPLEGSR	8	Unmodified	_MYPLEGSR_					0	0	0		ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	ENSG00000170677|ENST00000397942|SOCS6	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1547729372978	3	318.156744	951.448402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.572	1	22.572	22.072	23.072	0								0	0	0	1.0178	1	9393	9393		0.35063	0.081612	1				22311	4158	11073	11123	25602	25602					-0.029264343883596666
MYPLKPTWWF	10	Oxidation (M)	_M(Oxidation (M))YPLKPTWWF_		M(1)YPLKPTWWF		M(42)YPLKPTWWF	0	0	1		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	692.8431884646416	2	692.841559	1383.66857	2.1643	0.0014995	0.62193	0.0004309	2.7862	0.0019304	692.8420341955772	76.341	0.73346	77.634	77.311	78.045	1.2938					73	23	4	0	0	0	0.25725	1	32103	32103		41.956	33.8	1	3586900			22312	3677	11074	11124	25603	25603		62			-0.007922087808310607
MYPLKPTWWF	10	Unmodified	_MYPLKPTWWF_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	684.8453857302666	2	684.844102	1367.67365	3.5892	0.002458	-1.4612	-0.0010007	2.128	0.0014573	684.8431754510134	82.077	0.59584	83.289	83.006	83.602	1.2125					62	18	5	0	0	0	0.1353	3	34439	34394;34439;34480		57.722	42.474	1	6491800			22313	3677	11074	11125	25604;25605;25606	25605					0.004520950818005076
MYPLKPTWWF	10	Unmodified	_MYPLKPTWWF_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	684.8447753787041	2	684.844102	1367.67365	3.2802	0.0022465	-1.4407	-0.00098666	1.8395	0.0012598	684.8427403027712	81.532	0.83923	83.228	82.953	83.792	1.6959					70	26	4	0	0	0	0.1353	4	34202	34155;34202;34241;34285		57.722	42.474	1	6967200			22314	3677	11074	11125	25607;25608;25609;25610	25608					0.004520950818005076
MYPQLTFAPV	10	Unmodified	_MYPQLTFAPV_					0	0	0		TSGA13|p.D219Ifs*4|1|0.04|ENSG00000213265|chr7:130671664-130671665|-/ATTGTGGTAT|frameshift_variant;ENSG00000213265|ENST00000356588|TSGA13	TSGA13|p.D219Ifs*4|1|0.04|ENSG00000213265|chr7:130671664-130671665|-/ATTGTGGTAT|frameshift_variant	TSGA13|p.D219Ifs*4|1|0.04|ENSG00000213265|chr7:130671664-130671665|-/ATTGTGGTAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	583.0720092654228	2	583.79936	1165.58417	2.182	0.0012738	-2.4801	-0.0014479	-0.29813	-0.00017405	583.796763924498	44.086	0.21735	45.44	45.284	45.502	1.3536					11	6	2	0	0	0	0.12488	1	18510	18510		12.241	2.8575	1	557540			22315	5215	11075	11126	25611	25611					0.007998404024192496
MYPRLGGFVM	10	Unmodified	_MYPRLGGFVM_					0	0	0		ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.7951537966728	2	585.793555	1169.57256	3.0806	0.0018046	-1.8854	-0.0011045	1.1952	0.00070011	585.7922029320895	60.486	0.37333	61.906	61.779	62.153	1.4196					19	11	2	0	0	0	0.24174	1	25386	25386		43.858	28.011	1	1500800			22316	2276	11076	11127	25612	25612					-0.005446798925277108
MYPRLGGFVM	10	Unmodified	_MYPRLGGFVM_					0	0	0		ENSG00000125755|ENST00000245934|SYMPK;ENST00000598155.5_1_19:46318820-46327397:-|nuORF	ENSG00000125755|ENST00000245934|SYMPK	ENSG00000125755|ENST00000245934|SYMPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.7940551638603	2	585.793555	1169.57256	3.0299	0.0017749	-0.44751	-0.00026215	2.5823	0.0015127	585.7934722575554	59.986	0.31415	61.955	61.794	62.108	1.969					15	9	2	0	0	0	0.35292	1	25171	25171		36.127	7.6402	1	1309700			22317	2276	11076	11127	25613	25613					-0.005446798925277108
MYPYIFHVL	9	Unmodified	_MYPYIFHVL_					0	0	0		nc|ENSG00000048828|Q9NZB2-6|FAM120A;FAM120A|p.R999*|1|0.08|ENSG00000048828|chr9:93562253-93562254|-/T|frameshift_variant;FAM120A|p.S1040Lfs*12|1|0.09|ENSG00000048828|chr9:93564300-93564301|-/C|frameshift_variant;FAM120A|p.V1027Tfs*33|1|0.06|ENSG00000048828|chr9:93564260-93564261|-/GACTGTATTTCCCC|frameshift_variant;nc|ENSG00000048828|Q9NZB2-4|FAM120A;ENSG00000048828|ENST00000277165|FAM120A;ENST00000475933.1_1_9:96291769-96293007:+|nuORF;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8073608279228	2	591.804445	1181.59434	2.5478	0.0015078	-0.27707	-0.00016397	2.2707	0.0013438	591.8047441048842	75.61	0.58595	76.916	76.555	77.141	1.3063					32	18	2	0	0	0	0.24585	1	31731	31731		28.173	13.592	1	766860			22318	7820	11077	11128	25614	25614					0.010804481276863953
MYPYIFHVL	9	Unmodified	_MYPYIFHVL_					0	0	0		nc|ENSG00000048828|Q9NZB2-6|FAM120A;FAM120A|p.R999*|1|0.08|ENSG00000048828|chr9:93562253-93562254|-/T|frameshift_variant;FAM120A|p.S1040Lfs*12|1|0.09|ENSG00000048828|chr9:93564300-93564301|-/C|frameshift_variant;FAM120A|p.V1027Tfs*33|1|0.06|ENSG00000048828|chr9:93564260-93564261|-/GACTGTATTTCCCC|frameshift_variant;nc|ENSG00000048828|Q9NZB2-4|FAM120A;ENSG00000048828|ENST00000277165|FAM120A;ENST00000475933.1_1_9:96291769-96293007:+|nuORF;nc|ENSG00000048828|Q9NZB2-2|FAM120A;nc|ENSG00000048828|Q9NZB2-5|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	591.7281982302666	2	591.804445	1181.59434	2.7931	0.001653	-0.68748	-0.00040685	2.1056	0.0012461	591.8043845270702	75.141	0.52835	76.922	76.575	77.103	1.7817					26	16	2	0	0	0	0.095205	1	31469	31469		28.173	13.592	1	816250			22319	7820	11077	11128	25615	25615					0.010804481276863953
MYSNIFHVF	9	Unmodified	_MYSNIFHVF_					0	0	0		ENSG00000181035|ENST00000318596|SLC25A42	ENSG00000181035|ENST00000318596|SLC25A42	ENSG00000181035|ENST00000318596|SLC25A42	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.2759887576103	2	579.276052	1156.53755	1.956	0.0011331	-1.0506	-0.0006086	0.90537	0.00052446	579.2747865102069	68.033	0.37016	69.41	69.213	69.583	1.3778					34	11	4	0	0	0	0.13873	2	28570	28514;28570		39.957	24.11	1	3489800			22320	4566	11078	11129	25616;25617	25617					-0.03445599428846435
MYSNIFHVF	9	Unmodified	_MYSNIFHVF_					0	0	0		ENSG00000181035|ENST00000318596|SLC25A42	ENSG00000181035|ENST00000318596|SLC25A42	ENSG00000181035|ENST00000318596|SLC25A42	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.2770263552666	2	579.276052	1156.53755	1.396	0.00080867	0.18899	0.00010948	1.585	0.00091814	579.2753210551341	67.416	0.39877	69.286	69.059	69.458	1.87					34	12	4	0	0	0	0.091139	1	28268	28268		52.268	39.737	1	2924700			22321	4566	11078	11129	25618	25618					-0.03445599428846435
MYTLGITNF	9	Unmodified	_MYTLGITNF_					0	0	0		ENSG00000111229|ENST00000228825|ARPC3;ENST00000467622.2_1_12:110874278-110874939:-|nuORF;ENST00000397300.2_1_11:93921617-93921950:-|nuORF	ENSG00000111229|ENST00000228825|ARPC3	ENSG00000111229|ENST00000228825|ARPC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2661010622978	2	530.26261	1058.51067	2.628	0.0013935	0.39541	0.00020967	3.0234	0.0016032	530.263051180638	71.831	0.27862	73.655	73.507	73.786	1.824					19	8	3	0	0	0	0.19075	1	30129	30129		34.102	12.356	1	1397500			22322	1732	11079	11130	25619	25619					-0.016247080400262348
NAAFALKQY	9	Unmodified	_NAAFALKQY_					0	0	0		ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant;nc|ENSG00000189079|Q68CP9-3|ARID2;ENSG00000189079|ENST00000334344|ARID2;ENST00000426776.5_1_12:46123676-46169876:+|nuORF;ENST00000427628.5_1_12:46123676-46149750:+|nuORF;ARID2|p.C180*|1|0.16|ENSG00000189079|chr12:45817788-45817804|ATGCACTCTCCTATCAA/-|frameshift_variant	ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant	ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2761718630791	2	513.274367	1024.53418	1.1925	0.00061209	0.67359	0.00034574	1.8661	0.00095783	513.2749051911463	30.462	0.28008	32.277	32.139	32.419	1.8151					12	8	2	0	0	0	0.27148	1	12766	12766		26.884	12.978	1	646670			22323	77	11080	11131	25620	25620					0.02289473788800933
NADAIVVKL	9	Unmodified	_NADAIVVKL_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7851135134697	2	471.784567	941.554582	2.2469	0.0010601	-0.49828	-0.00023508	1.7487	0.00082499	471.78436961075505	41.839	0.4283	43.165	42.908	43.336	1.3254					33	13	3	0	0	0	0.0080484	3	17520	17477;17520;17578		110.55	45.318	1	6908300			22324	4985	11081	11132	25621;25622;25623	25622					0.08146644448606821
NADAIVVKL	9	Unmodified	_NADAIVVKL_					0	0	0		ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7850524783134	2	471.784567	941.554582	2.2701	0.001071	-0.71254	-0.00033617	1.5576	0.00073483	471.7842993236339	41.301	0.39323	43.194	42.991	43.384	1.8927					28	12	3	0	0	0	0.0080484	2	17325	17275;17325		110.55	45.318	1	6824500			22325	4985	11081	11132	25624;25625	25625					0.08146644448606821
NADALSDRFEK	11	Unmodified	_NADALSDRFEK_					0	0	0		ENSG00000072364|ENST00000265343|AFF4	ENSG00000072364|ENST00000265343|AFF4	ENSG00000072364|ENST00000265343|AFF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5431701540947	3	422.542203	1264.60478	-0.066679	-2.8175E-05	2.3684	0.0010007	2.3017	0.00097256	422.5432041273936	13.796	0.15463	14.522	14.442	14.596	0.72639					9	4	3	0	0	0	0.90941	1	5736	5736		9.2438	0.79947	1	640370			22326	881	11082	11133	25626	25626					-0.01693897684208423
NADDFPNLF	9	Unmodified	_NADDFPNLF_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7390624880791	2	526.737814	1051.46108	2.6186	0.0013793	0.29008	0.0001528	2.9087	0.0015321	526.738128997455	72.313	0.45927	73.643	73.423	73.883	1.3298					31	14	3	0	0	0	0.093059	2	30337	30337;30389		51.63	27.609	1	2099400			22327	5477	11083	11134	25627;25628	25627					-0.06259699724478196
NADDFPNLF	9	Unmodified	_NADDFPNLF_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7390014529228	2	526.737814	1051.46108	2.621	0.0013806	-0.38401	-0.00020227	2.237	0.0011783	526.737829289693	71.935	0.39688	73.759	73.507	73.904	1.8239					31	12	3	0	0	0	0.10473	2	30130	30130;30177		47.749	32.91	1	1914800			22328	5477	11083	11134	25629;25630	25629					-0.06259699724478196
NADDSYEPP	9	Unmodified	_NADDSYEPP_					0	0	0		BLNK|p.G230Qfs*44|1|0.04|ENSG00000095585|chr10:96209896-96209897|-/CCTG|frameshift_variant;nc|ENSG00000095585|Q8WV28-3|BLNK;nc|ENSG00000095585|Q8WV28-2|BLNK;ENSG00000095585|ENST00000224337|BLNK	BLNK|p.G230Qfs*44|1|0.04|ENSG00000095585|chr10:96209896-96209897|-/CCTG|frameshift_variant	BLNK|p.G230Qfs*44|1|0.04|ENSG00000095585|chr10:96209896-96209897|-/CCTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.4718200564384	3	336.469933	1006.38797	2.1681	0.00072949	3.1871	0.0010724	5.3551	0.0018018	336.4713588555963	72.458	0.40591	74.268	74.074	74.48	1.8101					36	12	4	0	0	0	0.80152	1	30436	30436		1.9064	0	1	3041400			22329	104	11084	11135	25631	25631					-0.1149687323775197
NADITVLL	8	Unmodified	_NADITVLL_					0	0	0			REV__tr|A0A7D6VWV6|A0A7D6VWV6_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09775PE=4SV=1	REV__tr|A0A7D6VWV6|A0A7D6VWV6_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.4961425662041	1	858.49311	857.485833	1.8097	0.0015536	2.0325	0.0017449	3.8423	0.0032985	858.4951651803483	67.811	0.26777	69.189	69.035	69.303	1.3778					13	8	2	0	0	0	0.064957	1	28464	28464		100.37	11.468	1	892510	+		22330	15544	11085	11136	25632	25632					0.05138980148910832
NADLDELCQLL	11	Unmodified	_NADLDELCQLL_					0	0	0			REV__CRY1|p.K278Rfs*50|1|0.15|ENSG00000008405|chr12:106999855-106999855|T/-|frameshift_variant	REV__CRY1|p.K278Rfs*50|1|0.15|ENSG00000008405|chr12:106999855-106999855|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8026000857353	2	623.802828	1245.5911	1.7419	0.0010866	-2.9144	-0.001818	-1.1725	-0.00073142	623.801165001452	78.706	0.40268	80.441	80.258	80.66	1.735					39	12	4	0	0	0	0.90709	1	33068	33068		9.3831	1.473	1	6290100	+		22331	8409	11086	11137	25633	25633					-0.021868915076538542
NADLDELCQLL	11	Unmodified	_NADLDELCQLL_					0	0	0			REV__CRY1|p.K278Rfs*50|1|0.15|ENSG00000008405|chr12:106999855-106999855|T/-|frameshift_variant	REV__CRY1|p.K278Rfs*50|1|0.15|ENSG00000008405|chr12:106999855-106999855|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	624.3809081912041	2	623.802828	1245.5911	1.7419	0.0010866	-2.9144	-0.001818	-1.1725	-0.00073142	623.801165001452	78.706	0.40268	80.441	80.258	80.66	1.735					39	12	4	0	0	0	0.14606	1	33078	33078		5.7319	0	1	6290100	+		22332	8409	11086	11137	25634	25634					-0.021868915076538542
NADPQAVTM	9	Unmodified	_NADPQAVTM_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.7190124392509	2	473.718567	945.422581	1.3273	0.00062876	-1.0384	-0.00049189	0.28892	0.00013686	473.7182529670284	22.69	0.30299	23.904	23.769	24.072	1.2145					24	9	4	0	0	0	0.1388	2	9512	9465;9512		39.95	18.203	1	4342900			22333	1387	11087	11138	25635;25636	25636					-0.052313286306457485
NADPQAVTM	9	Unmodified	_NADPQAVTM_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	946.4277221560478	1	946.429858	945.422581	0.81677	0.00077302	-0.40048	-0.00037902	0.4163	0.000394	946.4304730394301	22.719	0.2109	23.934	23.799	24.01	1.2145					9	6	2	0	0	0	0.093705	1	9494	9494		51.415	24.532	1	1013900			22334	1387	11087	11138	25637	25637					-0.052313286306457485
NADPQAVTM	9	Unmodified	_NADPQAVTM_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.7190734744072	2	473.718567	945.422581	0.75411	0.00035723	-0.52652	-0.00024942	0.22759	0.00010781	473.7184796828206	22.324	0.30379	23.94	23.8	24.104	1.6158					28	9	4	0	0	0	0.1388	2	9310	9310;9357		39.95	15.276	1	3358900			22335	1387	11087	11138	25638;25639	25638					-0.052313286306457485
NADPQAVTM	9	Unmodified	_NADPQAVTM_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	946.4345580935478	1	946.429858	945.422581	0.72576	0.00068688	0.12483	0.00011814	0.85059	0.00080503	946.430920646065	22.348	0.21196	23.964	23.862	24.074	1.6158					11	6	2	0	0	0	0.3091	1	9334	9334		24.991	3.2443	1	588220			22336	1387	11087	11138	25640	25640					-0.052313286306457485
NAEHLCAF	8	Unmodified	_NAEHLCAF_					0	0	0		ENST00000463407.5_1_13:25905583-25905760:+|nuORF	ENST00000463407.5_1_13:25905583-25905760:+|nuORF	ENST00000463407.5_1_13:25905583-25905760:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.7019225955009	2	452.70272	903.390887	2.0344	0.00092099	-1.8102	-0.00081949	0.22422	0.00010151	452.7018364074334	68.879	0.34376	69.201	69.064	69.407	0.32224					18	10	2	0	0	0	0.89176	1	28819	28819		0.79363	0	1	964130			22337	6684	11088	11139	25641	25641					-0.06467276593934912
NAEIQANLI	9	Unmodified	_NAEIQANLI_					0	0	0		ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	ENSG00000166046|ENST00000299045|TCP11L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2719909548759	2	493.269281	984.52401	1.2576	0.00062033	1.0894	0.00053736	2.347	0.0011577	493.26965032305833	70.619	0.39377	72.457	72.349	72.742	1.8378					24	12	3	0	0	0	0.21592	1	29684	29684		31.268	0.6318	1	4688700			22338	3878	11089	11140	25642	25642					0.031128660635772576
NAFASVILF	9	Unmodified	_NAFASVILF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;ENST00000434365.1_1_X:114938170-114938437:+|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2761108279228	2	491.273835	980.533118	4.4297	0.0021762	1.2973	0.00063734	5.727	0.0028135	491.2743559808137	87.321	0.71211	88.413	88.118	88.831	1.0918					63	22	4	0	0	0	0.029093	4	36803	36757;36803;36841;36880		88.904	40.558	1	30204000			22339	5396	11090	11141	25643;25644;25645;25646	25644					0.042072594199112245
NAFASVILF	9	Unmodified	_NAFASVILF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;ENST00000434365.1_1_X:114938170-114938437:+|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	981.5460082888603	1	981.540394	980.533118	5.0071	0.0049147	3.1965	0.0031375	8.2036	0.0080522	981.5411852558195	87.32	0.4012	88.412	88.21	88.612	1.0918					35	12	4	0	0	0	0.01454	2	36779	36779;36828		103.75	42.391	1	12782000			22340	5396	11090	11141	25647;25648	25647					0.042072594199112245
NAFASVILF	9	Unmodified	_NAFASVILF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;ENST00000434365.1_1_X:114938170-114938437:+|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2769042849541	2	491.273835	980.533118	4.6978	0.0023079	1.2098	0.00059433	5.9076	0.0029023	491.2743559002452	86.852	0.63841	88.347	88.064	88.703	1.4953					62	20	4	0	0	0	0.037761	4	36647	36562;36607;36647;36706		78.149	29.804	1	25925000			22341	5396	11090	11141	25649;25650;25651;25652	25651					0.042072594199112245
NAFASVILF	9	Unmodified	_NAFASVILF_					0	0	0		ENSG00000254772|ENST00000329251|EEF1G;RPL27A-EEF1G|1|fusion;nc|ENSG00000254772|P26641-2|EEF1G;ENST00000526409.5_1_11:62327153-62342310:-|nuORF;ENST00000434365.1_1_X:114938170-114938437:+|nuORF	ENSG00000254772|ENST00000329251|EEF1G	ENSG00000254772|ENST00000329251|EEF1G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	981.5452148318291	1	981.540394	980.533118	4.7192	0.0046321	4.1719	0.0040948	8.891	0.0087269	981.5421956959095	86.867	0.39879	88.362	88.151	88.55	1.4953					34	12	4	0	0	0	0.0066739	2	36633	36568;36633		115.69	37.543	1	12747000			22342	5396	11090	11141	25653;25654	25654					0.042072594199112245
NAFDGPITI	9	Unmodified	_NAFDGPITI_					0	0	0		ENST00000525209.5_1_11:35208413-35222108:+|nuORF;nc|ENSG00000026508|P16070-8|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-9|CD44;nc|ENSG00000026508|P16070-16|CD44;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-13|CD44;nc|ENSG00000026508|P16070-14|CD44;nc|ENSG00000026508|P16070-12|CD44;nc|ENSG00000026508|P16070-18|CD44;nc|ENSG00000026508|P16070-15|CD44;ENSG00000026508|ENST00000428726|CD44	ENST00000525209.5_1_11:35208413-35222108:+|nuORF	ENST00000525209.5_1_11:35208413-35222108:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	947.4855834841728	1	947.483273	946.475997	2.7473	0.0026031	0.55563	0.00052645	3.303	0.0031295	947.4838152144171	60.941	0.53218	62.36	62.184	62.716	1.4196					25	16	2	0	0	0	0.0080158	2	25539	25539;25604		110.67	45.44	1	1579000			22343	628	11091	11142	25655;25656	25655					0.0006179214353778661
NAFDGPITI	9	Unmodified	_NAFDGPITI_					0	0	0		ENST00000525209.5_1_11:35208413-35222108:+|nuORF;nc|ENSG00000026508|P16070-8|CD44;nc|ENSG00000026508|P16070-5|CD44;nc|ENSG00000026508|P16070-7|CD44;nc|ENSG00000026508|P16070-3|CD44;nc|ENSG00000026508|P16070-6|CD44;nc|ENSG00000026508|P16070-4|CD44;nc|ENSG00000026508|P16070-17|CD44;nc|ENSG00000026508|P16070-9|CD44;nc|ENSG00000026508|P16070-16|CD44;ENST00000531118.5_1_11:35198231-35211698:+|nuORF;nc|ENSG00000026508|P16070-10|CD44;nc|ENSG00000026508|P16070-11|CD44;nc|ENSG00000026508|P16070-13|CD44;nc|ENSG00000026508|P16070-14|CD44;nc|ENSG00000026508|P16070-12|CD44;nc|ENSG00000026508|P16070-18|CD44;nc|ENSG00000026508|P16070-15|CD44;ENSG00000026508|ENST00000428726|CD44	ENST00000525209.5_1_11:35208413-35222108:+|nuORF	ENST00000525209.5_1_11:35208413-35222108:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	947.4853393435478	1	947.483273	946.475997	3.5757	0.0033879	-0.7017	-0.00066485	2.874	0.002723	947.4817863352675	60.406	0.34682	62.371	62.26	62.607	1.9653					15	10	2	0	0	0	0.023685	1	25368	25368		96.367	46.434	1	1467900			22344	628	11091	11142	25657	25657					0.0006179214353778661
NAFEDSFSSIL	11	Unmodified	_NAFEDSFSSIL_					0	0	0		nc|ENSG00000116044|Q16236-3|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;PALLD-NFE2L2|2|fusion;PALLD-NFE2L2|3|fusion;PALLD-NFE2L2|1|fusion;PALLD-NFE2L2|4|fusion	nc|ENSG00000116044|Q16236-3|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.2897827029228	2	615.287868	1228.56118	2.5996	0.0015995	0.28479	0.00017523	2.8844	0.0017747	615.2877791192662	79.13	0.46738	80.397	80.193	80.66	1.2668					46	14	5	0	0	0	0.0041629	3	33272	33182;33229;33272		133.05	93.095	1	9786900			22345	1948	11092	11143	25658;25659;25660	25660					-0.043955071813115865
NAFEDSFSSIL	11	Unmodified	_NAFEDSFSSIL_					0	0	0		nc|ENSG00000116044|Q16236-3|NFE2L2;nc|ENSG00000116044|Q16236-2|NFE2L2;ENSG00000116044|ENST00000397062|NFE2L2;PALLD-NFE2L2|2|fusion;PALLD-NFE2L2|3|fusion;PALLD-NFE2L2|1|fusion;PALLD-NFE2L2|4|fusion	nc|ENSG00000116044|Q16236-3|NFE2L2	nc|ENSG00000116044|Q16236-3|NFE2L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.2890502810478	2	615.287868	1228.56118	2.1185	0.0013035	-0.17116	-0.00010531	1.9473	0.0011982	615.2877653972661	78.75	0.43329	80.485	80.227	80.66	1.735					43	13	4	0	0	0	0.018819	3	33011	32964;33011;33067		100.09	60.783	1	7192700			22346	1948	11092	11143	25661;25662;25663	25662					-0.043955071813115865
NAFEELVAF	9	Unmodified	_NAFEELVAF_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2591430544853	2	520.258382	1038.50221	2.9689	0.0015446	-1.3199	-0.00068669	1.6489	0.00085788	520.2572099833355	80.788	0.36127	82.021	81.832	82.193	1.2332					24	11	3	0	0	0	0.1109	1	33924	33924		45.7	21.679	1	2219100			22347	1766	11093	11144	25664	25664					-0.015499386850024166
NAFEKPVAAG	10	Unmodified	_NAFEKPVAAG_					0	0	0			REV__ENSG00000166111|ENST00000610966|SVOP	REV__ENSG00000166111|ENST00000610966|SVOP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2680541872978	2	502.263999	1002.51345	4.2897	0.0021546	3.2653	0.00164	7.555	0.0037946	502.26587003736444	86.811	0.42971	88.306	88.151	88.581	1.4953					21	13	2	0	0	0	0.52861	1	36654	36654		26.268	0.86883	1	2172400	+		22348	10811	11094	11145	25665	25665					0.012288834091350509
NAFPEIFYT	9	Unmodified	_NAFPEIFYT_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1101.529101550579	1	1101.52514	1100.51786	3.1413	0.0034602	1.7623	0.0019413	4.9036	0.0054014	1101.5242165045868	73.409	0.59931	74.727	74.463	75.062	1.318					48	18	3	0	0	0	0.031145	3	30804	30804;30854;30912		85.642	42.58	1	3074000			22349	4939	11095	11146	25666;25667;25668	25666					-0.028376521679547295
NAFPEIFYT	9	Unmodified	_NAFPEIFYT_					0	0	0		ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	ENSG00000196455|ENST00000356763|PIK3R4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1101.528247058392	1	1101.52514	1100.51786	2.7337	0.0030112	3.4805	0.0038338	6.2142	0.0068451	1102.5334408948393	72.9	0.69791	74.71	74.416	75.114	1.8101					51	21	4	0	0	0	0.070055	1	30648	30648		60.074	24.03	1	3176500			22350	4939	11095	11146	25669	25669					-0.028376521679547295
NAFSGVMML	9	2 Oxidation (M)	_NAFSGVM(Oxidation (M))M(Oxidation (M))L_		NAFSGVM(1)M(1)L		NAFSGVM(130)M(130)L	0	0	2		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2262756228447	2	501.225171	1000.43579	2.3664	0.0011861	-0.23355	-0.00011706	2.1329	0.001069	501.22530138830655	44.132	0.44217	45.486	45.284	45.727	1.3536					39	13	4	0	0	0	0.00090036	3	18520	18472;18520;18557		133.7	66.358	1	9973900			22351	1174	11096	11147	25670;25671;25672	25671		20;21			-0.06441213842913385
NAFSGVMML	9	2 Oxidation (M)	_NAFSGVM(Oxidation (M))M(Oxidation (M))L_		NAFSGVM(1)M(1)L		NAFSGVM(140)M(140)L	0	0	2		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2258178591728	2	501.225171	1000.43579	1.8334	0.00091895	-1.1964	-0.00059967	0.637	0.00031928	501.2247559562512	43.562	0.38523	45.506	45.285	45.67	1.9438					38	12	4	0	0	0	0.00032761	2	18267	18223;18267		136.33	87.988	1	8019100			22352	1174	11096	11147	25673;25674	25674		20;21			-0.06441213842913385
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(1)ML		NAFSGVM(41)M(-41)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	985.4511596560478	1	985.44815	984.440874	3.47	0.0034195	-1.1892	-0.0011719	2.2808	0.0022476	985.4476948489986	59.213	0.4588	60.633	60.436	60.895	1.4196					43	14	4	0	0	0	4.8155E-05	3	24820	24776;24820;24875		152.41	104.07	2	7862000			22353	1174	11096	11148	25675;25676;25677	25676		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(1)ML		NAFSGVM(35)M(-35)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2291442751884	2	493.227713	984.440874	2.4857	0.001226	0.77497	0.00038224	3.2607	0.0016083	493.2279071944649	59.214	0.67535	60.634	60.409	61.084	1.4196					55	21	4	0	0	0	0.023786	3	24806	24806;24858;24913		96.285	55.836	2	21153000			22354	1174	11096	11148	25678;25679;25680	25678		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVMM(1)L		NAFSGVM(-36)M(36)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2289001345634	2	493.227713	984.440874	2.3182	0.0011434	-0.74966	-0.00036975	1.5686	0.00077366	493.22763303551363	63.603	1.736	65.017	64.626	66.362	1.4134					133	55	5	0	0	0	0.007852	5	26742	26593;26652;26702;26742;26836		111.29	73.136	2	30338000			22355	1174	11096	11148	25681;25682;25683;25684;25685	25684		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVMM(1)L		NAFSGVM(-43)M(43)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	985.4503051638603	1	985.44815	984.440874	3.2849	0.0032371	-2.041	-0.0020113	1.2439	0.0012258	985.4470025205627	63.567	0.84347	64.98	64.723	65.566	1.4134					59	26	4	0	0	0	2.6424E-05	3	26666	26622;26666;26717		166.45	106.06	2	7215900			22356	1174	11096	11148	25686;25687;25688	25687		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVM(0.048)M(0.952)L		NAFSGVM(-13)M(13)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2287475466728	2	493.227713	984.440874	2.1403	0.0010556	-0.25881	-0.00012765	1.8814	0.00092798	493.2273456236512	66.034	1.8127	67.433	66.54	68.353	1.3989					74	58	2	0	0	0	0.066815	1	27788	27788		61.357	33.184	2	1358500			22357	1174	11096	11148	25689	25689		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(1)ML		NAFSGVM(41)M(-41)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	985.4504272341728	1	985.44815	984.440874	2.5107	0.0024742	-0.98759	-0.00097322	1.5231	0.0015009	985.4481116214919	58.712	0.58067	60.681	60.487	61.067	1.969					44	18	4	0	0	0	4.8155E-05	3	24651	24599;24651;24703		152.41	104.07	2	7226700			22358	1174	11096	11148	25690;25691;25692	25691		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(1)ML		NAFSGVM(35)M(-35)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2289306521416	2	493.227713	984.440874	2.3063	0.0011375	0.35601	0.0001756	2.6623	0.0013131	493.22772646816173	58.711	0.70518	60.68	60.457	61.162	1.969					60	22	4	0	0	0	0.010279	3	24661	24614;24661;24716		107.19	55.557	2	15691000			22359	1174	11096	11148	25693;25694;25695	25694		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVMM(1)L		NAFSGVM(-36)M(36)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2279235720634	2	493.227713	984.440874	2.3624	0.0011652	-1.1081	-0.00054652	1.2543	0.00061867	493.2274605594817	63.037	1.5923	64.982	64.501	66.094	1.9444					121	50	5	0	0	0	0.007852	5	26428	26379;26428;26468;26506;26644		111.29	71.33	2	28562000			22360	1174	11096	11148	25696;25697;25698;25699;25700	25697		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVMM(1)L		NAFSGVM(-41)M(41)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	985.4496337771416	1	985.44815	984.440874	2.5622	0.0025249	-1.5919	-0.0015688	0.97027	0.00095615	985.4474314561551	63.037	0.75346	64.982	64.752	65.505	1.9444					45	23	3	0	0	0	4.8155E-05	3	26444	26399;26444;26495		152.41	101.56	2	6718300			22361	1174	11096	11148	25701;25702;25703	25702		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVM(0.056)M(0.944)L		NAFSGVM(-12)M(12)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2287780642509	2	493.227713	984.440874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.005	1	65.933	65.433	66.433	1.928								0	0	0	0.042463	1	26854	26854		48.346	20.173	2				22362	1174	11096	11148	25704	25704		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(0.5)M(0.5)L		NAFSGVM(0)M(0)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2287475466728	2	493.227713	984.440874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.288	1	66.216	65.716	66.716	1.928								0	0	0	0.052667	1	26971	26971		43.858	17.517	2				22363	1174	11096	11148	25705	25705		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVMM(Oxidation (M))L_		NAFSGVM(0.01)M(0.99)L		NAFSGVM(-20)M(20)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2292968630791	2	493.227713	984.440874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.722	1	67.631	67.131	68.131	1.9085								0	0	0	0.045537	1	27569	27569		52.268	24.095	2				22364	1174	11096	11148	25706	25706		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(0.5)M(0.5)L		NAFSGVM(0)M(0)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2279846072197	2	493.227713	984.440874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.828	1	67.736	67.236	68.236	1.9085								0	0	0	0.049614	1	27616	27616		57.471	30.588	2				22365	1174	11096	11148	25707	25707		20;21			-0.05196909980293185
NAFSGVMML	9	Oxidation (M)	_NAFSGVM(Oxidation (M))ML_		NAFSGVM(0.5)M(0.5)L		NAFSGVM(0)M(0)L	0	0	1		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2280456423759	2	493.227713	984.440874	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.074	1	68.963	68.463	69.463	1.8889								0	0	0	0.042463	1	28139	28139		48.346	21.462	2				22366	1174	11096	11148	25708	25708		20;21			-0.05196909980293185
NAFSGVMML	9	Unmodified	_NAFSGVMML_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.4552490115166	1	969.453236	968.445959	3.1193	0.003024	-1.1029	-0.0010692	2.0163	0.0019547	969.4529276499671	73.004	0.59792	74.333	74.036	74.634	1.3297					70	18	5	0	0	0	0.0058174	5	30616	30568;30616;30654;30694;30732		118.89	65.319	1	66043000			22367	1174	11096	11149	25709;25710;25711;25712;25713	25710					-0.03952606117684354
NAFSGVMML	9	Unmodified	_NAFSGVMML_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2315246462822	2	485.230256	968.445959	3.576	0.0017352	-0.95839	-0.00046504	2.6176	0.0012701	485.2301960329442	72.974	0.59792	74.304	74.036	74.634	1.3297					66	18	5	0	0	0	0.023786	4	30615	30572;30615;30655;30693		96.285	58.134	1	33085000			22368	1174	11096	11149	25714;25715;25716;25717	25715					-0.03952606117684354
NAFSGVMML	9	Unmodified	_NAFSGVMML_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	969.4559203982353	1	969.453236	968.445959	2.5253	0.0024481	-0.97138	-0.0009417	1.5539	0.0015064	969.4531175565756	72.468	0.59589	74.278	74.011	74.607	1.8101					66	18	5	0	0	0	0.0017491	4	30342	30342;30380;30431;30470		131.27	77.692	1	69878000			22369	1174	11096	11149	25718;25719;25720;25721	25718					-0.03952606117684354
NAFSGVMML	9	Unmodified	_NAFSGVMML_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2314025759697	2	485.230256	968.445959	2.6276	0.001275	-0.12106	-5.8742E-05	2.5065	0.0012162	485.2306212641135	72.468	0.80228	74.279	73.772	74.574	1.8101					70	25	5	0	0	0	0.019432	4	30356	30356;30405;30444;30484		99.799	59.35	1	37001000			22370	1174	11096	11149	25722;25723;25724;25725	25722					-0.03952606117684354
NAFSTSPHSS	10	Unmodified	_NAFSTSPHSS_					0	0	0			REV__nc|ENSG00000140948|Q8WYQ9|ZCCHC14	REV__nc|ENSG00000140948|Q8WYQ9|ZCCHC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7325317263603	2	517.73052	1033.44649	4.5785	0.0023704	-0.058745	-3.0414E-05	4.5197	0.00234	517.7302085538553	87.299	0.4323	88.391	88.179	88.612	1.0918					64	13	7	0	0	0	0.80011	1	36835	36835		12.241	0	1	6766600	+		22371	10136	11097	11150	25726	25726					-0.06889771872624806
NAGDQGVVLL	10	Unmodified	_NAGDQGVVLL_					0	0	0			REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2698547244072	2	493.269281	984.52401	2.4801	0.0012234	-0.72588	-0.00035805	1.7542	0.0008653	493.2688456124355	71.156	0.32556	72.497	72.333	72.658	1.3415					18	10	2	0	0	0	0.48044	1	29845	29845		28.495	0.86571	1	3565600	+		22372	15631	11098	11151	25727	25727					0.03112866063599995
NAGDQGVVLL	10	Unmodified	_NAGDQGVVLL_					0	0	0			REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.269281	984.52401	2.4801	0.0012234	-0.72588	-0.00035805	1.7542	0.0008653	493.2688456124355	71.156	0.32556	72.497	72.333	72.658	1.3415	0.020173	-0.00086989	NaN	28.495	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3565600	+		22373	15631	11098	11151							0.03112866063599995
NAIDKLFVL	9	Unmodified	_NAIDKLFVL_					0	0	0		ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1;ENSG00000177156|ENST00000319006|TALDO1	ENST00000530119.5_1_11:747481-760254:+|nuORF	ENST00000530119.5_1_11:747481-760254:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.8105956912041	2	516.808042	1031.60153	3.0667	0.0015849	2.2343	0.0011547	5.301	0.0027396	516.8083664754031	70.122	0.31215	71.476	71.304	71.616	1.3536					13	9	2	0	0	0	0.042285	1	29409	29409		74.2	26.451	1	4654300			22374	4438	11099	11152	25728	25728					0.08699503999764602
NAIDKLFVL	9	Unmodified	_NAIDKLFVL_					0	0	0		ENST00000530119.5_1_11:747481-760254:+|nuORF;ENST00000533796.1_1_11:755745-760254:+|nuORF;nc|ENSG00000177156|P37837-2|TALDO1;ENSG00000177156|ENST00000319006|TALDO1	ENST00000530119.5_1_11:747481-760254:+|nuORF	ENST00000530119.5_1_11:747481-760254:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8116332888603	2	516.808042	1031.60153	2.6204	0.0013543	1.6973	0.00087718	4.3177	0.0022314	516.8087262454518	69.582	0.31445	71.435	71.262	71.577	1.853					15	9	2	0	0	0	0.02298	1	29176	29176		96.936	31.701	1	4274000			22375	4438	11099	11152	25729	25729					0.08699503999764602
NAIEHVIIP	9	Unmodified	_NAIEHVIIP_					0	0	0		ENSG00000100554|ENST00000216442|ATP6V1D	ENSG00000100554|ENST00000216442|ATP6V1D	ENSG00000100554|ENST00000216442|ATP6V1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2913085818291	2	503.290017	1004.56548	2.6294	0.0013234	0.24541	0.00012351	2.8748	0.0014469	503.29009579281126	44.455	0.41594	45.82	45.577	45.993	1.3653					24	12	2	0	0	0	0.04812	3	18623	18580;18623;18663		69.105	14.331	1	11537000			22376	1286	11100	11153	25730;25731;25732	25731					0.06338046822895649
NAIEHVIIP	9	Unmodified	_NAIEHVIIP_					0	0	0		ENSG00000100554|ENST00000216442|ATP6V1D	ENSG00000100554|ENST00000216442|ATP6V1D	ENSG00000100554|ENST00000216442|ATP6V1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2912170290947	2	503.290017	1004.56548	1.9696	0.0009913	0.2989	0.00015043	2.2685	0.0011417	503.2900045303201	43.839	0.37868	45.783	45.546	45.925	1.9438					22	11	2	0	0	0	0.037098	3	18382	18336;18382;18422		78.728	20.049	1	10771000			22377	1286	11100	11153	25733;25734;25735	25734					0.06338046822895649
NAKFLLIFFVV	11	Unmodified	_NAKFLLIFFVV_					0	0	0		tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.6016723513603	3	437.600553	1309.77983	3.1094	0.0013607	0.8565	0.0003748	3.9659	0.0017355	437.60085348382677	93.428	1.2555	93.596	92.964	94.22	0.16835					74	38	3	0	0	0	1.0388	1	39120	39120		0.50596	0	1	741140			22378	16470	11101	11154	25736	25736					0.13733173918785724
NAKYYTLL	8	Unmodified	_NAKYYTLL_					0	0	0			REV__ENSG00000125508|ENST00000217188|SRMS	REV__ENSG00000125508|ENST00000217188|SRMS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2690612673759	2	493.271293	984.528032	1.2576	0.00062033	-2.9882	-0.001474	-1.7307	-0.00085368	493.26965032305833	70.619	0.39377	72.457	72.349	72.742	1.8378					24	12	3	0	0	0	0.52405	1	29618	29618		46.021	4.0654	1	4688700	+		22379	9668	11102	11155	25737	25737					0.03514955557295707
NALCDDIDE	9	Unmodified	_NALCDDIDE_					0	0	0			REV__ENSG00000134250|ENST00000256646|NOTCH2	REV__ENSG00000134250|ENST00000256646|NOTCH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.4722778201103	3	336.471057	1006.39134	2.2384	0.00075315	1.2199	0.00041046	3.4583	0.0011636	336.47143046482716	72.97	0.40498	74.299	74.101	74.506	1.3298					30	12	3	0	0	0	0.77025	1	30691	30691		4.5289	0	1	2769800	+		22380	9898	11103	11156	25738	25738					-0.11159946455404679
NALKLLAIDN	10	Unmodified	_NALKLLAIDN_					0	0	0			REV__ENSG00000215704|ENST00000375910|CELA2B	REV__ENSG00000215704|ENST00000375910|CELA2B	MSMS	GG20161007_CRH_Patient100_W632_02	4	362.2172424197197	3	362.21688	1083.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.58	1	104.75	104.25	105.25	0.1731								0	0	0	0.66222	1	44276	44276		0.69767	0	1		+		22381	10184	11104	11157	25739	25739					0.09033987540146882
NAMDVVVQF	9	Unmodified	_NAMDVVVQF_					0	0	0		ENST00000492084.5_1_6:31654991-31670409:-|nuORF;nc|ENSG00000204427|O95870-2|ABHD16A;ENSG00000204427|ENST00000395952|ABHD16A;ENST00000477016.5_1_6:31656024-31659403:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7548095583916	2	511.75241	1021.49027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.779	1	67.178	66.678	67.678	1.3989								0	0	0	0.045657	1	27589	27589		62.573	26.528	1				22382	5142	11105	11158	25740	25740					-0.019618786998194082
NANMVKLLL	9	Unmodified	_NANMVKLLL_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3029357790947	2	508.30207	1014.58959	0.88087	0.00044775	-0.50182	-0.00025508	0.37904	0.00019267	508.3020018312201	56.892	0.24245	58.86	58.721	58.964	1.9684					15	7	3	0	0	0	0.026836	1	23894	23894		92.491	52.534	1	2404400			22383	3278	11106	11159	25741	25741					0.08287563984936241
NAPSRGSWAG	10	Unmodified	_NAPSRGSWAG_					0	0	0			REV__ENST00000392025.5_1_19:41074088-41077932:+|nuORF	REV__ENST00000392025.5_1_19:41074088-41077932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7416869997978	2	501.741222	1001.46789	1.9725	0.00098967	-1.1647	-0.00058438	0.80777	0.00040529	501.7409596059806	63.068	0.81265	65.012	64.532	65.345	1.9444					62	25	4	0	0	0	0.77604	1	26430	26430		14.838	0	1	6830800	+		22384	12794	11107	11160	25742	25742					-0.03278342053226879
NAQPSGYTM	9	Unmodified	_NAQPSGYTM_					0	0	0			REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7094604372978	2	484.710742	967.406931	1.2666	0.00061396	-4.2161	-0.0020436	-2.9495	-0.0014296	484.70902618826545	22.67	0.18167	23.885	23.828	24.01	1.2145					9	5	2	0	0	0	0.42305	1	9501	9501		19.257	4.6753	1	477830	+		22385	14482	11108	11161	25743	25743					-0.07807615147680735
NAQPSGYTM	9	Unmodified	_NAQPSGYTM_					0	0	0			REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7086059451103	2	484.710742	967.406931	0.42845	0.00020767	-3.6708	-0.0017793	-3.2424	-0.0015716	484.7094709135827	22.348	0.21196	23.964	23.862	24.074	1.6158					11	6	3	0	0	0	0.35391	1	9336	9336		22.736	3.2973	1	558560	+		22386	14482	11108	11161	25744	25744					-0.07807615147680735
NAQPSGYTM	9	Unmodified	_NAQPSGYTM_					0	0	0			REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	484.710742	967.406931	1.2666	0.00061396	-4.2161	-0.0020436	-2.9495	-0.0014296	484.70902618826545	22.67	0.18167	23.885	23.828	24.01	1.2145	-0.039803	-0.00018829	NaN	22.736	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477830	+		22387	14482	11108	11161							-0.07807615147680735
NAQPSGYTM	9	Unmodified	_NAQPSGYTM_					0	0	0			REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	REV__nc|ENSG00000167703|Q8N370-4|SLC43A2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	484.710742	967.406931	0.42845	0.00020767	-3.6708	-0.0017793	-3.2424	-0.0015716	484.7094709135827	22.348	0.21196	23.964	23.862	24.074	1.6158	0.039803	0.00034035	NaN	22.736	11	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	558560	+		22388	14482	11108	11161							-0.07807615147680735
NASSNIILFL	10	Unmodified	_NASSNIILFL_					0	0	0			REV__ENSG00000204687|ENST00000377127|MAS1L	REV__ENSG00000204687|ENST00000377127|MAS1L	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3087036013603	2	546.308406	1090.60226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.164	1	97.164	96.664	97.664	0								0	0	0	0.62071	1	40622	40622		20.415	1.1575	1		+		22389	11798	11109	11162	25745	25745					0.06058298648804339
NAVPITPTLNR	11	Unmodified	_NAVPITPTLNR_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	598.8464233279228	2	598.343312	1194.67207	1.7607	0.0010535	2.3962	0.0014337	4.1569	0.0024872	598.3450127030163	33.182	0.22453	33.182	33.103	33.328	0					15	7	3	0	0	0	0.43089	2	13901	13901;13954		26.021	6.7637	1	1317600		+	22390	336	11110	11163	25746;25747	25746					0.08252177317422138
NAVPITPTLNR	11	Unmodified	_NAVPITPTLNR_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	598.343312	1194.67207	1.1629	0.00069584	4.6444	0.0027789	5.8073	0.0034748	598.3466432067601	32.71	0.18121	33.005	32.897	33.078	0.29431	-0.088647	0.0023326	NaN	26.021	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535460		+	22391	336	11110	11163							0.08252177317422138
NAWIETVAV	9	Unmodified	_NAWIETVAV_					0	0	0		nc|ENSG00000142185|O94759-2|TRPM2;ENSG00000142185|ENST00000397928|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.7662841677666	2	501.766374	1001.5182	3.027	0.0015189	0.65535	0.00032883	3.6824	0.0018477	501.7658507434484	62.646	0.35595	64.059	63.928	64.284	1.4134					26	11	3	0	0	0	0.15635	2	26278	26278;26326		37.974	10.183	1	3189200			22392	2987	11111	11164	25748;25749	25748					0.017497675518939104
NAWIETVAV	9	Unmodified	_NAWIETVAV_					0	0	0		nc|ENSG00000142185|O94759-2|TRPM2;ENSG00000142185|ENST00000397928|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	nc|ENSG00000142185|O94759-2|TRPM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7674743533134	2	501.766374	1001.5182	2.8759	0.001443	-0.69205	-0.00034725	2.1838	0.0010958	501.765536442901	62.178	0.299	64.135	63.968	64.267	1.9571					22	9	3	0	0	0	0.15635	1	26085	26085		37.974	0	1	3166200			22393	2987	11111	11164	25750	25750					0.017497675518939104
NAYTGIVLL	9	Unmodified	_NAYTGIVLL_					0	0	0		ENST00000535245.1_1_12:121017538-121019044:-|nuORF;ENSG00000167272|ENST00000357500|POP5;ENST00000542776.5_1_12:121017123-121019113:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	963.5537597537041	1	963.550959	962.543683	1.8749	0.0018066	-0.032881	-3.1682E-05	1.842	0.0017749	963.5508824099688	71.184	0.50793	72.526	72.271	72.779	1.3415					53	16	4	0	0	0	0.019432	4	29927	29792;29835;29874;29927		99.799	17.909	1	64205000			22394	3961	11112	11165	25751;25752;25753;25754	25754					0.06091242074330694
NAYTGIVLL	9	Unmodified	_NAYTGIVLL_					0	0	0		ENST00000535245.1_1_12:121017538-121019044:-|nuORF;ENSG00000167272|ENST00000357500|POP5;ENST00000542776.5_1_12:121017123-121019113:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2799255251884	2	482.279118	962.543683	2.5481	0.0012289	-1.3479	-0.00065005	1.2002	0.00057885	482.27836308003543	71.157	0.41491	72.498	72.333	72.748	1.3415					40	13	4	0	0	0	0.029061	3	29877	29828;29877;29935		88.954	36.926	1	12215000			22395	3961	11112	11165	25755;25756;25757	25756					0.06091242074330694
NAYTGIVLL	9	Unmodified	_NAYTGIVLL_					0	0	0		ENST00000535245.1_1_12:121017538-121019044:-|nuORF;ENSG00000167272|ENST00000357500|POP5;ENST00000542776.5_1_12:121017123-121019113:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	963.5477172732353	1	963.550959	962.543683	1.1294	0.0010882	0.13602	0.00013106	1.2654	0.0012193	963.5510312544568	70.708	0.57224	72.546	72.228	72.801	1.8378					57	18	4	0	0	0	0.019432	4	29569	29569;29612;29651;29704		99.799	31.718	1	60279000			22396	3961	11112	11165	25758;25759;25760;25761	25758					0.06091242074330694
NAYTGIVLL	9	Unmodified	_NAYTGIVLL_					0	0	0		ENST00000535245.1_1_12:121017538-121019044:-|nuORF;ENSG00000167272|ENST00000357500|POP5;ENST00000542776.5_1_12:121017123-121019113:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	ENST00000535245.1_1_12:121017538-121019044:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2784301638603	2	482.279118	962.543683	0.99299	0.0004789	-0.28644	-0.00013815	0.70655	0.00034075	482.2789384442776	70.616	0.48239	72.454	72.26	72.742	1.8378					42	15	4	0	0	0	0.031377	3	29614	29614;29664;29709		85.272	26.583	1	16699000			22397	3961	11112	11165	25762;25763;25764	25762					0.06091242074330694
NCELESDVF	9	Unmodified	_NCELESDVF_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.2634765505791	2	528.221139	1054.42773	2.9309	0.0015482	2.8582	0.0015097	5.7891	0.0030579	528.2224456671053	62.715	0.23864	64.128	63.987	64.226	1.4134					12	7	2	0	0	0	0.10591	1	26317	26317		19.257	1.1106	1	750190	+		22398	11743	11113	11166	25765	25765					-0.09731069558688432
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.3076660037041	1	608.2093	607.202024	3.3279	0.002024	-1.757	-0.0010686	1.5708	0.00095538	608.2100603890873	74.084	0.95292	75.402	74.935	75.888	1.318					38	30	2	0	0	0	2.3239	1	31001	31001		0.69038	0	1	420770	+		22399	14343	11114	11167	25766	25766					-0.11728929167406932
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.2117187380791	1	608.2093	607.202024	1.9883	0.0012093	-0.82548	-0.00050206	1.1628	0.00070725	608.2106360100701	46.978	1.579	48.954	48.039	49.618	1.976					68	50	2	0	0	0	0.89178	1	19380	19380		0.69038	0	1	644110	+		22400	14343	11114	11167	25767	25767					-0.11728929167406932
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.2117187380791	1	608.2093	607.202024	1.3702	0.00083339	-2.4366	-0.001482	-1.0664	-0.00064856	608.210187426972	45.779	1.0045	47.749	47.31	48.315	1.9703					50	31	2	0	0	0	2.3239	1	19380	19380		0.69038	0	1	498520	+		22401	14343	11114	11167	25768	25768					-0.11728929167406932
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.3699218630791	1	608.2093	607.202024	4.6584	0.0028333	-1.5831	-0.00096283	3.0753	0.0018704	608.21038449799	87.503	0.47047	88.999	88.734	89.204	1.4953					23	14	2	0	0	0	2.3239	1	36910	36910		0	0	1	800970	+		22402	14343	11114	11167	25769	25769					-0.11728929167406932
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.3664	0.0014393	-2.5394	-0.0015445	-0.17304	-0.00010525	608.2102515614145	48.81	1.7984	48.81	48.347	50.146	0	-0.071666	-0.00064872	NaN	0.69038	88	57	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	766120	+		22403	14343	11114	11167							-0.11728929167406932
NCGGGGGS	8	Unmodified	_NCGGGGGS_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|239|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	608.2093	607.202024	1.9883	0.0012093	-0.82548	-0.00050206	1.1628	0.00070725	608.2106360100701	46.978	1.579	48.954	48.039	49.618	1.976	0.071666	0.00039373	NaN	0.69038	68	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644110	+		22404	14343	11114	11167							-0.11728929167406932
NCSKHSCAGV	10	Unmodified	_NCSKHSCAGV_					0	0	0		chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	chr11:1761468-1771391|89|105.97|0.0|23.34|-|2|TE_info:L1MC2,L1MC2_dup4178,L1,LINE,donor,+,1771391,1771768|CTSD,None|4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2174865603447	2	503.215669	1004.41678	1.4022	0.00070561	2.207	0.0011106	3.6092	0.0018162	503.2168922452599	77.851	0.55252	79.602	79.379	79.932	1.7514					85	17	7	0	0	0	0.82659	1	32713	32713		9.3831	0.035688	1	15235000			22405	183	11115	11168	25770	25770					-0.08524750413960192
NCVCVCACMHM	11	Unmodified	_NCVCVCACMHM_					0	0	0		ENST00000484751.1_1_7:66410067-66416200:+|nuORF	ENST00000484751.1_1_7:66410067-66416200:+|nuORF	ENST00000484751.1_1_7:66410067-66416200:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2111694216728	2	607.209303	1212.40405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.552	1	66.552	66.052	67.052	0								0	0	0	0.63775	1	27720	27720		0	0	1				22406	6851	11116	11169	25771	25771					-0.1936531245603419
NCVCVCACMHM	11	Unmodified	_NCVCVCACMHM_					0	0	0		ENST00000484751.1_1_7:66410067-66416200:+|nuORF	ENST00000484751.1_1_7:66410067-66416200:+|nuORF	ENST00000484751.1_1_7:66410067-66416200:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	607.2093994021416	2	607.209303	1212.40405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.21	109.71	110.71	0.048843								0	0	0	0.63775	1	47537	47537		0	0	1				22407	6851	11116	11169	25772	25772					-0.1936531245603419
NDEDCCNP	8	Unmodified	_NDEDCCNP_					0	0	0			REV__nc|ENSG00000089091|Q9NVP4-2|DZANK1	REV__nc|ENSG00000089091|Q9NVP4-2|DZANK1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.1756469607353	3	303.761954	908.264032	1.4048	0.00042672	-1.7801	-0.00054071	-0.37528	-0.000114	303.76071528676925	60.987	0.90553	61.317	60.92	61.825	0.32974					41	28	2	0	0	0	2.3239	1	25675	25675		0	0	1	303180	+		22408	8880	11117	11170	25773	25773					-0.193769906012335
NDERPLQVD	9	Unmodified	_NDERPLQVD_					0	0	0			REV__ENSG00000196233|ENST00000421806|LCOR	REV__ENSG00000196233|ENST00000421806|LCOR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2542907595634	3	362.512244	1084.5149	2.9858	0.0010824	-2.533	-0.00091826	0.45273	0.00016412	362.5110410123279	91.219	0.094284	92.2	92.133	92.227	0.98156					4	2	2	0	0	0	0.11938	1	38426	38426		1.1933	0.23107	1	87824	+		22409	11622	11118	11171	25774	25774					-0.023975272927373226
NDISDIDCL	9	Unmodified	_NDISDIDCL_					0	0	0			REV__ERO1LB-HEATR1|1|fusion	REV__ERO1LB-HEATR1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2205078005791	2	504.221139	1006.42773	2.6588	0.0013406	-3.5935	-0.0018119	-0.93466	-0.00047128	504.21943620154303	59.222	0.27129	60.641	60.497	60.769	1.4196					20	8	3	0	0	0	0.39927	1	24815	24815		20.454	3.3407	1	2486000	+		22410	14156	11119	11172	25775	25775					-0.07523069558692441
NDISDIDCL	9	Unmodified	_NDISDIDCL_					0	0	0			REV__ERO1LB-HEATR1|1|fusion	REV__ERO1LB-HEATR1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.221139	1006.42773	2.6588	0.0013406	-3.5935	-0.0018119	-0.93466	-0.00047128	504.21943620154303	59.222	0.27129	60.641	60.497	60.769	1.4196	-0.019203	0.00028611	NaN	20.454	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2486000	+		22411	14156	11119	11172							-0.07523069558692441
NDKVTKHKFN	10	Unmodified	_NDKVTKHKFN_					0	0	0			REV__ENSG00000144792|ENST00000322734|ZNF660	REV__ENSG00000144792|ENST00000322734|ZNF660	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8348876833916	2	615.833111	1229.65167	3.0748	0.0018936	-1.2386	-0.00076279	1.8362	0.0011308	615.8325258661949	100.29	0.12144	100.49	100.42	100.54	0.20527					12	3	4	0	0	0	0.82659	1	42164	42164		9.3831	0	1	8189900	+		22412	10260	11120	11173	25776	25776					0.04603006657612241
NDKVTKHKFN	10	Unmodified	_NDKVTKHKFN_					0	0	0			REV__ENSG00000144792|ENST00000322734|ZNF660	REV__ENSG00000144792|ENST00000322734|ZNF660	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	615.833111	1229.65167	3.0517	0.0018793	-0.15061	-9.2752E-05	2.9011	0.0017866	615.8328526761218	100.33	0.1351	100.51	100.44	100.57	0.18047	0.0087373	0.00071641	NaN	9.3831	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7762900	+		22413	10260	11120	11173							0.04603006657612241
NDMWTQKFMKK	11	Unmodified	_NDMWTQKFMKK_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A;REV__TOP2A-STAU1|1|fusion	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2414123415947	3	486.240702	1455.70028	1.243	0.00060437	0.97174	0.0004725	2.2147	0.0010769	486.24132340516815	29.283	0.64545	29.283	29.025	29.67	0					63	20	4	0	0	0	0.95935	1	12225	12225		6.2344	1.5184	1	8681000	+		22414	9826;14680	11121	11174	25777	25777					-0.009345840891910484
NDMWTQKFMKK	11	Unmodified	_NDMWTQKFMKK_					0	0	0			REV__ENSG00000131747|ENST00000423485|TOP2A;REV__TOP2A-STAU1|1|fusion	REV__ENSG00000131747|ENST00000423485|TOP2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2416259646416	3	486.240702	1455.70028	1.8103	0.00088026	0.56725	0.00027582	2.3776	0.0011561	486.24125027220526	28.905	0.57464	29.184	28.985	29.559	0.2793					42	18	4	0	0	0	0.99899	1	12132	12132		3.8459	0	1	2496100	+		22415	9826;14680	11121	11174	25778	25778					-0.009345840891910484
NDRFLWRHF	9	Unmodified	_NDRFLWRHF_					0	0	0		ENST00000380736.5_1_X:11157631-11160408:-|nuORF	ENST00000380736.5_1_X:11157631-11160408:-|nuORF	ENST00000380736.5_1_X:11157631-11160408:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.154	1	13.154	12.654	13.654	0								0	0	0	0.42693	1	5449	5449		0.26902	0.1097	1				22416	6227	11122	11175	25779	25779					0.00853863442898728
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1620361208916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.996	1	72.996	72.496	73.496	0								0	0	0	0.66264	1	30392	30392		0	0	1		+		22417	8533	11123	11176	25780	25780					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1617309451103	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.287	1	73.287	72.787	73.787	0								0	0	0	0.66264	1	30511	30511		0	0	1		+		22418	8533	11123	11176	25781	25781					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1611205935478	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.416	1	73.416	72.916	73.916	0								0	0	0	0.66264	1	30566	30566		0	0	1		+		22419	8533	11123	11176	25782	25782					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1599609255791	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.557	1	73.557	73.057	74.057	0								0	0	0	0.66264	1	30628	30628		0	0	1		+		22420	8533	11123	11176	25783	25783					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1644164919853	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.708	1	73.708	73.208	74.208	0								0	0	0	0.66264	1	30692	30692		0	0	1		+		22421	8533	11123	11176	25784	25784					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1606933474541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.734	1	75.734	75.234	76.234	0								0	0	0	0.66264	1	31527	31527		0	0	1		+		22422	8533	11123	11176	25785	25785					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.1639282107353	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.819	1	79.819	79.319	80.319	0								0	0	0	0.66264	1	33236	33236		0	0	1		+		22423	8533	11123	11176	25786	25786					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1631957888603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8508	1	4.9388	4.4388	5.4388	0.08803								0	0	0	0.66264	1	2004	2004		0	0	1		+		22424	8533	11123	11176	25787	25787					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1610595583916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0684	1	5.1564	4.6564	5.6564	0.08803								0	0	0	0.66264	1	2095	2095		0	0	1		+		22425	8533	11123	11176	25788	25788					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1622192263603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.177	1	20.388	19.888	20.888	0.21024								0	0	0	0.66264	1	8383	8383		0	0	1		+		22426	8533	11123	11176	25789	25789					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1671020388603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.686	1	20.896	20.396	21.396	0.21024								0	0	0	0.66264	1	8592	8592		0	0	1		+		22427	8533	11123	11176	25790	25790					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1614257693291	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.904	1	23.137	22.637	23.637	0.23306								0	0	0	0.66264	1	9552	9552		0	0	1		+		22428	8533	11123	11176	25791	25791					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1667968630791	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.32	1	26.581	26.081	27.081	0.26173								0	0	0	0.66264	1	11000	11000		0	0	1		+		22429	8533	11123	11176	25792	25792					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1605102419853	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.454	1	26.715	26.215	27.215	0.26173								0	0	0	0.66264	1	11058	11058		0	0	1		+		22430	8533	11123	11176	25793	25793					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1620361208916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.605	1	26.867	26.367	27.367	0.26173								0	0	0	0.66264	1	11122	11122		0	0	1		+		22431	8533	11123	11176	25794	25794					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1611816287041	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.815	1	27.077	26.577	27.577	0.26173								0	0	0	0.66264	1	11212	11212		0	0	1		+		22432	8533	11123	11176	25795	25795					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1622802615166	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.985	1	27.246	26.746	27.746	0.26173								0	0	0	0.66264	1	11282	11282		0	0	1		+		22433	8533	11123	11176	25796	25796					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1636230349541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.111	1	27.373	26.873	27.873	0.26173								0	0	0	0.66264	1	11335	11335		0	0	1		+		22434	8533	11123	11176	25797	25797					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1638671755791	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.285	1	27.556	27.056	28.056	0.27119								0	0	0	0.66264	1	11408	11408		0	0	1		+		22435	8533	11123	11176	25798	25798					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1628295779228	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.42	1	27.691	27.191	28.191	0.27119								0	0	0	0.66264	1	11465	11465		0	0	1		+		22436	8533	11123	11176	25799	25799					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1620971560478	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.979	1	43.303	42.803	43.803	0.32389								0	0	0	0.66264	1	18052	18052		0	0	1		+		22437	8533	11123	11176	25800	25800					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1636230349541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.187	1	43.511	43.011	44.011	0.32389								0	0	0	0.66264	1	18136	18136		0	0	1		+		22438	8533	11123	11176	25801	25801					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1614868044853	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.328	1	43.652	43.152	44.152	0.32389								0	0	0	0.66264	1	18193	18193		0	0	1		+		22439	8533	11123	11176	25802	25802					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1614257693291	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.015	1	49.345	48.845	49.845	0.33019								0	0	0	0.66264	1	20547	20547		0	0	1		+		22440	8533	11123	11176	25803	25803					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1672241091728	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.814	1	68.136	67.636	68.636	0.32269								0	0	0	0.66264	1	28390	28390		0	0	1		+		22441	8533	11123	11176	25804	25804					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1615478396416	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.037	1	68.36	67.86	68.86	0.32269								0	0	0	0.66264	1	28481	28481		0	0	1		+		22442	8533	11123	11176	25805	25805					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1602050662041	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.193	1	68.516	68.016	69.016	0.32269								0	0	0	0.66264	1	28546	28546		0	0	1		+		22443	8533	11123	11176	25806	25806					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1622192263603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.366	1	68.688	68.188	69.188	0.32224								0	0	0	0.66264	1	28618	28618		0	0	1		+		22444	8533	11123	11176	25807	25807					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1630126833916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.486	1	74.811	74.311	75.311	0.32464								0	0	0	0.66264	1	31155	31155		0	0	1		+		22445	8533	11123	11176	25808	25808					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1634399294853	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.097	1	75.422	74.922	75.922	0.32464								0	0	0	0.66264	1	31410	31410		0	0	1		+		22446	8533	11123	11176	25809	25809					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1651489138603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.385	1	75.71	75.21	76.21	0.32464								0	0	0	0.66264	1	31527	31527		0	0	1		+		22447	8533	11123	11176	25810	25810					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1628906130791	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.424	1	79.724	79.224	80.224	0.30047								0	0	0	0.66264	1	33208	33208		0	0	1		+		22448	8533	11123	11176	25811	25811					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1620971560478	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.748	1	80.048	79.548	80.548	0.30047								0	0	0	0.66264	1	33340	33340		0	0	1		+		22449	8533	11123	11176	25812	25812					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1646606326103	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80	1	80.3	79.8	80.8	0.30047								0	0	0	0.66264	1	33444	33444		0	0	1		+		22450	8533	11123	11176	25813	25813					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1639892458916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.148	1	80.448	79.948	80.948	0.30047								0	0	0	0.66264	1	33505	33505		0	0	1		+		22451	8533	11123	11176	25814	25814					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1624023318291	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.277	1	80.568	80.068	81.068	0.29056								0	0	0	0.66264	1	33559	33559		0	0	1		+		22452	8533	11123	11176	25815	25815					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1626464724541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.406	1	80.697	80.197	81.197	0.29056								0	0	0	0.66264	1	33614	33614		0	0	1		+		22453	8533	11123	11176	25816	25816					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1616088747978	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.898	1	92.088	91.588	92.588	0.19042								0	0	0	0.66264	1	38485	38485		0	0	1		+		22454	8533	11123	11176	25817	25817					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1639892458916	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.019	1	92.209	91.709	92.709	0.19042								0	0	0	0.66264	1	38535	38535		0	0	1		+		22455	8533	11123	11176	25818	25818					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1633788943291	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.219	1	92.409	91.909	92.909	0.19042								0	0	0	0.66264	1	38615	38615		0	0	1		+		22456	8533	11123	11176	25819	25819					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1628295779228	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.34	1	92.508	92.008	93.008	0.16835								0	0	0	0.66264	1	38666	38666		0	0	1		+		22457	8533	11123	11176	25820	25820					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1641723513603	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.61	1	92.778	92.278	93.278	0.16835								0	0	0	0.66264	1	38782	38782		0	0	1		+		22458	8533	11123	11176	25821	25821					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1642333865166	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.737	1	92.905	92.405	93.405	0.16835								0	0	0	0.66264	1	38834	38834		0	0	1		+		22459	8533	11123	11176	25822	25822					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1622802615166	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.861	1	93.029	92.529	93.529	0.16835								0	0	0	0.66264	1	38885	38885		0	0	1		+		22460	8533	11123	11176	25823	25823					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1633178591728	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.022	1	93.19	92.69	93.69	0.16835								0	0	0	0.66264	1	38949	38949		0	0	1		+		22461	8533	11123	11176	25824	25824					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1642944216728	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.147	1	93.316	92.816	93.816	0.16835								0	0	0	0.66264	1	38999	38999		0	0	1		+		22462	8533	11123	11176	25825	25825					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1634399294853	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.26	1	93.428	92.928	93.928	0.16835								0	0	0	0.66264	1	39044	39044		0	0	1		+		22463	8533	11123	11176	25826	25826					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1633788943291	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.555	1	93.7	93.2	94.2	0.14493								0	0	0	0.66264	1	39163	39163		0	0	1		+		22464	8533	11123	11176	25827	25827					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.1626464724541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.087	1	94.232	93.732	94.732	0.14493								0	0	0	0.66264	1	39380	39380		0	0	1		+		22465	8533	11123	11176	25828	25828					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1636230349541	2	536.162007	1070.30946	4.656	0.0024964	0.068254	3.6595E-05	4.7243	0.002533	536.1624408543674	90.151	0.60545	91.171	90.926	91.531	1.0199					23	18	2	0	0	0	0.89803	2	37969	37969;38083		0	0	1	954460	+		22466	8533	11123	11176	25829;25830	25829					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1619750857353	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.819	1	14.545	14.045	15.045	0.72639								0	0	0	0.66264	1	5739	5739		0	0	1		+		22467	8533	11123	11176	25831	25831					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1642944216728	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.95	1	26.21	25.71	26.71	1.2594								0	0	0	0.66264	1	10442	10442		0	0	1		+		22468	8533	11123	11176	25832	25832					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.1589843630791	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4698	1	4.215	3.715	4.715	0.74525								0	0	0	0.66264	1	1439	1439		0	0	1		+		22469	8533	11123	11176	25833	25833					-0.22288093605129689
NDSDSNDSCD	10	Unmodified	_NDSDSNDSCD_					0	0	0			REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	REV__ENST00000598292.1_1_19:15511553-15512083:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.1626464724541	2	536.162007	1070.30946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5869	1	4.3321	3.8321	4.8321	0.74525								0	0	0	0.66264	1	1488	1488		0	0	1		+		22470	8533	11123	11176	25834	25834					-0.22288093605129689
NDSPIILVV	9	Unmodified	_NDSPIILVV_					0	0	0		tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2859680056572	2	485.2844	968.554247	2.2375	0.0010858	1.4101	0.00068428	3.6476	0.0017701	485.28503146927886	63.722	0.47769	65.129	64.988	65.466	1.4071					25	14	2	0	0	0	0.11643	2	26738	26738;26788		43.858	11.553	1	2579900			22471	16910	11124	11177	25835;25836	25835					0.06871224728774905
NDSPIILVV	9	Unmodified	_NDSPIILVV_					0	0	0		tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	tr|A0A7D6VTB0|A0A7D6VTB0_9CLOTGTP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2857543826103	2	485.2844	968.554247	2.2797	0.0011063	0.8051	0.0003907	3.0848	0.001497	485.28480742232426	63.255	0.47601	65.199	64.997	65.473	1.9444					26	14	3	0	0	0	0.091139	2	26516	26516;26562		52.268	8.4101	1	2883700			22472	16910	11124	11177	25837;25838	25837					0.06871224728774905
NDSYDWWRSNF	11	Unmodified	_NDSYDWWRSNF_					0	0	0			REV__tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	REV__tr|A0A7D6VVQ9|A0A7D6VVQ9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2114135622978	3	497.209224	1488.60584	0.18599	9.2476E-05	0.985	0.00048975	1.171	0.00058223	497.20995388142717	10.075	0.8195	10.075	9.4572	10.277	0					83	29	4	0	0	0	1.0366	1	4017	4017		1.2148	0.10508	1	15860000	+		22473	15534	11125	11178	25839	25839					-0.11891683315297996
NDTLPLVIIPI	11	Unmodified	_NDTLPLVIIPI_					0	0	0			REV__nc|ENSG00000143061|O75054-2|IGSF3	REV__nc|ENSG00000143061|O75054-2|IGSF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	403.2471191287041	3	403.248068	1206.72238	0.57976	0.00023379	-2.4296	-0.00097974	-1.8499	-0.00074595	403.2470968992768	92.517	0.51559	92.517	92.197	92.712	0					60	16	5	0	0	0	1.0366	1	38652	38652		0.40827	0.0075492	1	28493000	+		22474	14451	11126	11179	25840	25840					0.12728286922560983
NDYDEEDDDEE	11	Unmodified	_NDYDEEDDDEE_					0	0	0			REV__CHD1|p.D670Vfs*3|1|0.07|ENSG00000153922|chr5:98892696-98892697|-/A|frameshift_variant	REV__CHD1|p.D670Vfs*3|1|0.07|ENSG00000153922|chr5:98892696-98892697|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.2182494997978	2	694.218231	1386.42191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.635	1	96.037	95.537	96.537	0.40208								0	0	0	0.63775	1	40238	40238		0	0	1		+		22475	8203	11127	11180	25841	25841					-0.2558458611795231
NEAGYHFGHL	10	Unmodified	_NEAGYHFGHL_					0	0	0			REV__tr|A0A553SRI8|A0A553SRI8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_01140PE=4SV=1	REV__tr|A0A553SRI8|A0A553SRI8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_01140PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5117980837822	3	382.177195	1143.50976	-1.5985	-0.0006109	3.4562	0.0013209	1.8578	0.00070999	382.17961808892227	0.27901	0.73442	0.27901	-0.00030207	0.73411	0					64	34	3	0	0	0	0.12479	1	194	194		14.957	9.6603	1	441840	+		22476	15162	11128	11181	25842	25842					-0.05625786364680607
NEAGYHFGHL	10	Unmodified	_NEAGYHFGHL_					0	0	0			REV__tr|A0A553SRI8|A0A553SRI8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_01140PE=4SV=1	REV__tr|A0A553SRI8|A0A553SRI8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_01140PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5095092654228	3	382.177195	1143.50976	0.34997	0.00013375	2.0374	0.00077863	2.3873	0.00091238	382.17819122728065	16.978	0.3136	17.129	16.963	17.277	0.15093					13	9	2	0	0	0	0.12479	1	7038	7038		14.957	4.1577	1	534210	+		22477	15162	11128	11181	25843	25843					-0.05625786364680607
NEEHAAGRA	9	Unmodified	_NEEHAAGRA_					0	0	0			REV__nc|ENSG00000136367|Q9C0A1-2|ZFHX2	REV__nc|ENSG00000136367|Q9C0A1-2|ZFHX2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1964904665947	3	318.817779	953.431506	1.5135	0.00048253	0.92179	0.00029388	2.4353	0.00077641	318.81979940894894	56.329	0.42644	56.65	56.418	56.845	0.32103					30	14	3	0	0	0	0.11944	1	23548	23548		0.20686	0	1	2494700	+		22478	9981	11129	11182	25844	25844					-0.04707218949954495
NEGHPWVSLV	10	Unmodified	_NEGHPWVSLV_					0	0	0		GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant;ENSG00000169154|ENST00000307599|GOT1L1	GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	GOT1L1|p.V365Sfs*26|1|0.28|ENSG00000169154|chr8:37934467-37934468|-/GGCATCTGAAGTGGGGTGCAGTCTTGCAGAACTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.2904540896416	2	569.288005	1136.56146	2.6358	0.0015006	-1.811	-0.001031	0.82487	0.00046959	569.2886188110282	108.48	0.25797	108.53	108.38	108.64	0.050644					46	14	4	0	0	0	0.89803	1	46659	46659		1.1933	0.50296	1	235080000			22479	4071	11130	11183	25845	25845					-0.001360426708288287
NEGLLGVLL	9	Unmodified	_NEGLLGVLL_					0	0	0		ENST00000337288.9_2_2:96851998-96852052:-|nuORF	ENST00000337288.9_2_2:96851998-96852052:-|nuORF	ENST00000337288.9_2_2:96851998-96852052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.2796203494072	2	464.279118	926.543683	1.3305	0.00061773	0.46978	0.00021811	1.8003	0.00083584	464.2794261825731	58.569	0.31503	59.987	59.784	60.099	1.4181					16	9	2	0	0	0	0.10473	1	24525	24525		47.749	3.8904	1	2335600			22480	5918	11131	11184	25846	25846					0.07747242074333371
NEGLLGVLL	9	Unmodified	_NEGLLGVLL_					0	0	0		ENST00000337288.9_2_2:96851998-96852052:-|nuORF	ENST00000337288.9_2_2:96851998-96852052:-|nuORF	ENST00000337288.9_2_2:96851998-96852052:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	464.279118	926.543683	1.1185	0.00051929	-0.49857	-0.00023148	0.61992	0.00028782	464.27872089307215	58.001	0.33257	59.97	59.784	60.117	1.969	-0.0087222	-0.00034201	NaN	47.749	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4172600			22481	5918	11131	11184							0.07747242074333371
NEIVWLGESF	10	Unmodified	_NEIVWLGESF_					0	0	0			REV__HDGF|p.E88V|1|0.05|ENSG00000143321|chr1:156745048-156745048|T/A|missense_variant	REV__HDGF|p.E88V|1|0.05|ENSG00000143321|chr1:156745048-156745048|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.2997924685478	2	597.295496	1192.57644	2.9937	0.0017881	0.91996	0.00054949	3.9137	0.0023376	597.2961188264815	62.826	0.51707	64.24	64.016	64.533	1.4134					52	16	5	0	0	0	0.31869	2	26297	26297;26340		38.176	3.7738	1	45680000	+		22482	14179	11132	11185	25847;25848	25847					-0.01214595593478407
NEIYELWNL	9	Unmodified	_NEIYELWNL_					0	0	0			REV__nc|ENSG00000064763|Q96K12-2|FAR2	REV__nc|ENSG00000064763|Q96K12-2|FAR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.2979003787041	2	597.295496	1192.57644	2.9937	0.0017881	0.91996	0.00054949	3.9137	0.0023376	597.2961188264815	62.826	0.51707	64.24	64.016	64.533	1.4134					52	16	5	0	0	0	0.30098	1	26430	26430		25.399	0	1	45680000	+		22483	8665	11133	11186	25849	25849					-0.01214595593478407
NEKRHKVQIRK	11	Unmodified	_NEKRHKVQIRK_					0	0	0			REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	REV__tr|A0A553SPX1|A0A553SPX1_NIACIGlycosyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_11925PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	718.7098876833916	2	718.433858	1434.85316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.951	1	95.693	95.193	96.193	0.74124								0	0	0	0.63775	1	39945	39945		2.9952	0	1		+		22484	15112	11134	11187	25850	25850					0.15313115413960077
NELMADVHF	9	Unmodified	_NELMADVHF_					0	0	0		nc|ENSG00000184887|Q96KE9-2|BTBD6;nc|ENSG00000184887|Q96KE9-1|BTBD6;ENSG00000184887|ENST00000392554|BTBD6	nc|ENSG00000184887|Q96KE9-2|BTBD6	nc|ENSG00000184887|Q96KE9-2|BTBD6	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4837524294853	3	359.16742	1074.48043	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.519	1	41.836	41.336	42.336	0.31683								0	0	0	0.42693	1	17439	17439		1.1933	0	1				22485	4714	11135	11188	25851	25851					-0.05383066705235251
NELRRRKKEKE	11	Unmodified	_NELRRRKKEKE_					0	0	0			REV__nc|ENSG00000013374|Q9Y5A7-2|NUB1	REV__nc|ENSG00000013374|Q9Y5A7-2|NUB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.9607726931572	3	495.958462	1484.85356	4.4246	0.0021944	0.49941	0.00024769	4.924	0.0024421	495.9586211902955	89.724	1.8971	91.128	90.201	92.098	1.4045					113	59	3	0	0	0	1.0393	1	37637	37637		0.094841	0	1	2698900	+		22486	8542	11136	11189	25852	25852					0.13052490343170575
NEMYYCSKCK	10	Unmodified	_NEMYYCSKCK_					0	0	0		ENSG00000170832|ENST00000300896|USP32	ENSG00000170832|ENST00000300896|USP32	ENSG00000170832|ENST00000300896|USP32	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.5072814822197	3	423.50846	1267.50355	-0.40351	-0.00017089	-0.90808	-0.00038458	-1.3116	-0.00055547	423.50783507778254	11.956	0.15313	11.956	11.88	12.034	0					7	4	2	0	0	0	0.88022	1	4957	4957		1.7423	0.52744	1	915260			22487	4163	11137	11190	25853	25853					-0.11950131974413125
NEPSGFLEK	9	Unmodified	_NEPSGFLEK_					0	0	0			REV__tr|A0A7D6ZQH2|A0A7D6ZQH2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00345PE=3SV=1	REV__tr|A0A7D6ZQH2|A0A7D6ZQH2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00345PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7531005740166	2	510.753464	1019.49238	1.0127	0.00051722	-0.72959	-0.00037264	0.28307	0.00014458	511.25414512590555	18.981	0.27854	18.981	18.864	19.142	0					17	8	3	0	0	0	0.55689	1	7877	7877		13.042	0	1	675980	+		22488	15683	11138	11191	25854	25854					-0.016591266903787982
NEPSVIQIL	9	Unmodified	_NEPSVIQIL_					0	0	0			REV__ENST00000530736.1_1_11:18115485-18127588:-|nuORF	REV__ENST00000530736.1_1_11:18115485-18127588:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7879821658134	2	506.787307	1011.56006	2.7409	0.001389	4.022	0.0020383	6.7628	0.0034273	506.78903914014563	72.065	0.64149	73.888	73.634	74.275	1.824					53	20	3	0	0	0	0.04812	1	30179	30179		69.105	6.5322	1	11345000	+		22489	10836	11139	11192	25855	25855					0.054743232404462105
NERWFMRVRKK	11	Unmodified	_NERWFMRVRKK_					0	0	0			REV__tr|A0A7D7AGL9|A0A7D7AGL9_9CLOTPhosphoribosylformylglycinamidinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09215PE=4SV=1	REV__tr|A0A7D7AGL9|A0A7D7AGL9_9CLOTPhosphoribosylformylglycinamidinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2919189333916	3	517.289266	1548.84597	1.2463	0.00064471	3.4631	0.0017914	4.7094	0.0024361	517.2927430710805	51.68	1.5482	53.653	53.188	54.736	1.9722					77	51	3	0	0	0	1.0365	1	21745	21745		1.2148	0.10508	1	2870400	+		22490	15922	11140	11193	25856	25856					0.0935005954186181
NEVKWTEWK	9	Unmodified	_NEVKWTEWK_					0	0	0		nc|ENSG00000167723|Q8NET8-3|TRPV3;ENSG00000167723|ENST00000576742|TRPV3;nc|ENSG00000167723|Q8NET8-2|TRPV3	nc|ENSG00000167723|Q8NET8-3|TRPV3	nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	407.2065612673759	3	407.208384	1218.60332	-0.88866	-0.00036187	-1.9685	-0.00080158	-2.8571	-0.0011634	407.2074098859667	11.328	0.83251	11.328	10.802	11.635	0					39	26	2	0	0	0	0.77025	1	4644	4644		4.5289	0.12271	1	1869100			22491	3992	11141	11194	25857	25857					0.0027651301768401026
NEWCHYEF	8	Unmodified	_NEWCHYEF_					0	0	0		ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	ENSG00000174123|ENST00000308973|TLR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2182494997978	2	564.216192	1126.41783	1.8741	0.0010574	0.94832	0.00053506	2.8225	0.0015925	564.2169865385075	79.216	0.37062	80.951	80.753	81.124	1.735					47	11	6	0	0	0	0.88587	1	33234	33234		5.2307	0	1	4266900			22492	4314	11142	11195	25858	25858					-0.14032212773395258
NEWDCKDCIE	10	Unmodified	_NEWDCKDCIE_					0	0	0			REV__tr|A0A7D6VT54|A0A7D6VT54_9CLOTCysteine-richCPCCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19245PE=4SV=1	REV__tr|A0A7D6VT54|A0A7D6VT54_9CLOTCysteine-richCPCCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.7441284060478	2	627.741913	1253.46927	0.6281	0.00039428	3.1405	0.0019714	3.7686	0.0023657	627.7442083261791	70.682	0.60411	72.52	72.26	72.864	1.8378					67	19	5	0	0	0	0.70618	1	29626	29626		18.146	3.3081	1	27523000	+		22493	15475	11143	11196	25859	25859					-0.1473225686168007
NEYSSKCQECK	11	Unmodified	_NEYSSKCQECK_					0	0	0		ENSG00000115641|ENST00000530340|FHL2	ENSG00000115641|ENST00000530340|FHL2	ENSG00000115641|ENST00000530340|FHL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.1843749880791	3	440.184922	1317.53294	0.21454	9.4437E-05	-1.536	-0.0006761	-1.3214	-0.00058167	440.18424197425	12.409	0.32945	13.196	13.065	13.395	0.78751					24	10	3	0	0	0	0.97491	1	5143	5143		2.4348	0	1	1192700			22494	1930	11144	11197	25860	25860					-0.11312896424556129
NFCQDYER	8	Unmodified	_NFCQDYER_					0	0	0			REV__ENSG00000170855|ENST00000546954|TRIAP1	REV__ENSG00000170855|ENST00000546954|TRIAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7210571169853	2	537.719098	1073.42364	1.9431	0.0010449	-0.2963	-0.00015933	1.6468	0.00088553	537.7196924236027	65.263	0.58928	67.172	66.907	67.496	1.9085					76	18	7	0	0	0	0.87431	1	27390	27390		12.532	0	1	9367900	+		22495	10998	11145	11198	25861	25861					-0.11013114261754708
NFFKLRLFCC	10	Unmodified	_NFFKLRLFCC_					0	0	0		ENSG00000144815|ENST00000273347|NXPE3;NXPE3|p.V50Cfs*9|1|0.08|ENSG00000144815|chr3:101801285-101801286|-/T|frameshift_variant	ENSG00000144815|ENST00000273347|NXPE3	ENSG00000144815|ENST00000273347|NXPE3	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.887711	1289.6413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7512	1	3.7512	3.2512	4.2512	0								0	0	0	0.66254	1	1541	1541		0.15932	0	1				22496	3095	11146	11199	25862	25862					0.008069844071769694
NFHFENEL	8	Unmodified	_NFHFENEL_					0	0	0			REV__HOXA7|p.K147N|1|0.25|ENSG00000122592|chr7:27155161-27155161|C/A|missense_variant	REV__HOXA7|p.K147N|1|0.25|ENSG00000122592|chr7:27155161-27155161|C/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.7711669802666	2	525.237981	1048.46141	2.8943	0.0015202	2.5392	0.0013337	5.4335	0.0028539	525.2387005956025	69.777	0.21864	71.615	71.468	71.687	1.8378					10	6	2	0	0	0	2.3239	1	29229	29229		12.532	0	1	593840	+		22497	14224	11147	11200	25863	25863					-0.060882800046329066
NFKDVITNL	9	Unmodified	_NFKDVITNL_					0	0	0			REV__tr|A0A7D6ZZH9|A0A7D6ZZH9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20495PE=4SV=1	REV__tr|A0A7D6ZZH9|A0A7D6ZZH9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2939330935478	2	532.292756	1062.57096	3.217	0.0017124	-1.0069	-0.00053599	2.2101	0.0011764	532.2923803261992	61.994	0.60844	63.951	63.719	64.328	1.9571					58	19	5	0	0	0	0.39927	1	26051	26051		20.454	1.1966	1	12249000	+		22498	15796	11148	11201	25864	25864					0.042177256146942455
NFLELILSV	9	Unmodified	_NFLELILSV_					0	0	0		ENST00000475108.5_1_1:65897625-65897682:+|nuORF	ENST00000475108.5_1_1:65897625-65897682:+|nuORF	ENST00000475108.5_1_1:65897625-65897682:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.7706176638603	2	524.307875	1046.6012	2.4307	0.0012745	0.66087	0.0003465	3.0916	0.001621	524.3085714432688	69.485	0.64928	70.851	70.729	71.378	1.3657					48	20	3	0	0	0	0.11463	1	29345	29345		4.3292	0	1	1842000			22499	6778	11149	11202	25865	25865					0.07976084279903262
NFLSRSFYW	9	Unmodified	_NFLSRSFYW_					0	0	0		nc|ENSG00000104442|Q9NVT9-2|ARMC1;ENSG00000104442|ENST00000276569|ARMC1	nc|ENSG00000104442|Q9NVT9-2|ARMC1	nc|ENSG00000104442|Q9NVT9-2|ARMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.2986938357353	2	610.298373	1218.58219	1.9108	0.0011661	3.5849	0.0021879	5.4957	0.003354	610.3005714890268	66.237	0.48778	67.625	67.478	67.966	1.3888					40	15	3	0	0	0	0.034867	3	27809	27759;27809;27853		80.676	48.371	1	8042000			22500	1464	11150	11203	25866;25867;25868	25867					-0.01835452291152251
NFLSRSFYW	9	Unmodified	_NFLSRSFYW_					0	0	0		nc|ENSG00000104442|Q9NVT9-2|ARMC1;ENSG00000104442|ENST00000276569|ARMC1	nc|ENSG00000104442|Q9NVT9-2|ARMC1	nc|ENSG00000104442|Q9NVT9-2|ARMC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.2996093630791	2	610.298373	1218.58219	1.7263	0.0010536	1.8547	0.0011319	3.581	0.0021855	610.298332321269	65.729	0.5762	67.638	67.437	68.014	1.9085					38	18	3	0	0	0	0.019071	4	27572	27524;27572;27629;27684		100.09	54.391	1	8264100			22501	1464	11150	11203	25869;25870;25871;25872	25870					-0.01835452291152251
NFLTKVGSRR	10	Unmodified	_NFLTKVGSRR_					0	0	0			REV__nc|ENSG00000171174|Q9H477-2|RBKS	REV__nc|ENSG00000171174|Q9H477-2|RBKS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3444091677666	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.89803	1	31884	31884		1.1933	0.59184	1	9065200	+		22502	11015	11151	11204	25873	25873					0.09147016757151505
NFMNITVL	8	Unmodified	_NFMNITVL_					0	0	0			REV__tr|A0A7D6ZS13|A0A7D6ZS13_9CLOTYjbEfamilyputativemetaltransportproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14270PE=3SV=1	REV__tr|A0A7D6ZS13|A0A7D6ZS13_9CLOTYjbEfamilyputativemetaltransportproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14270PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	951.4943115115166	1	951.496815	950.489538	2.127	0.0020239	-1.3936	-0.001326	0.73347	0.00069789	951.4953387385782	82.785	0.30718	82.785	82.615	82.922	0					14	9	2	0	0	0	0.82039	1	34476	34476		19.439	0	1	1068900	+		22503	15699	11152	11205	25874	25874					0.01231326651100062
NFPKGMLLRF	10	Unmodified	_NFPKGMLLRF_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;ENST00000525606.5_1_11:10819365-10820979:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2325622439384	3	408.230355	1221.66923	1.3881	0.00056667	0.62808	0.0002564	2.0162	0.00082307	408.23032878324426	54.45	0.89062	55.855	55.438	56.328	1.4048					48	28	2	0	0	0	0.63205	2	22696	22696;22747		14.218	11.146	1	1774700			22504	1702	11153	11206	25875;25876	25875					0.06726630658909016
NFPKGMLLRF	10	Unmodified	_NFPKGMLLRF_					0	0	0		nc|ENSG00000110321|P78344-2|EIF4G2;ENSG00000110321|ENST00000339995|EIF4G2;ENST00000534470.1_1_11:10820460-10820850:-|nuORF;ENST00000525606.5_1_11:10819365-10820979:-|nuORF	nc|ENSG00000110321|P78344-2|EIF4G2	nc|ENSG00000110321|P78344-2|EIF4G2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5642272830009	3	408.230355	1221.66923	1.3169	0.00053759	-1.0368	-0.00042327	0.28004	0.00011432	408.2297083705029	53.94	0.96941	55.91	55.471	56.44	1.9697					51	30	2	0	0	0	0.63205	4	22454	22454;22535;22590;22680		18.721	15.649	1	1302000			22505	1702	11153	11206	25877;25878;25879;25880	25877					0.06726630658909016
NFQIEHHLF	9	Unmodified	_NFQIEHHLF_					0	0	0		ENST00000533676.5_1_11:61641288-61643947:-|nuORF;ENSG00000221968|ENST00000278829|FADS3;ENST00000522359.2_1_11:61630757-61632750:+|nuORF;nc|ENSG00000149485|O60427-2|FADS1;nc|ENSG00000134824|O95864-4|FADS2;nc|ENSG00000134824|O95864-2|FADS2;nc|ENSG00000149485|O60427|FADS1;ENSG00000134824|ENST00000278840|FADS2;nc|ENSG00000274150|A8MWK0|FADS2B;ENSG00000149485|ENST00000350997|FADS1	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	ENST00000533676.5_1_11:61641288-61643947:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	593.1595947146416	2	592.795998	1183.57744	2.3634	0.001401	-1.8334	-0.0010868	0.52999	0.00031418	592.7956218642413	39.612	0.2088	40.922	40.846	41.055	1.3102					10	6	2	0	0	0	0.094078	1	16599	16599		24.674	19.443	1	704640			22506	5277	11154	11207	25881	25881					-0.007003364339425389
NFRGYQQQ	8	Unmodified	_NFRGYQQQ_					0	0	0		ENSG00000140455|ENST00000380324|USP3;nc|ENSG00000140455|Q9Y6I4-2|USP3	ENSG00000140455|ENST00000380324|USP3	ENSG00000140455|ENST00000380324|USP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7526733279228	2	520.749047	1039.48354	3.5514	0.0018494	3.9083	0.0020352	7.4597	0.0038846	520.7509394942645	72.841	0.34561	74.17	73.973	74.318	1.3297					22	10	3	0	0	0	0.76103	1	30570	30570		24.674	0.65332	1	2282500			22507	2918	11155	11208	25882	25882					-0.03462055536192565
NFRKQQQYF	9	Unmodified	_NFRKQQQYF_					0	0	0		ENST00000228506.7_1_12:121137802-121138003:+|nuORF	ENST00000228506.7_1_12:121137802-121138003:+|nuORF	ENST00000228506.7_1_12:121137802-121138003:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	420.2153808474541	3	420.215761	1257.62546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.661	1	92.598	92.098	93.098	0.93623								0	0	0	0.42693	1	38605	38605		1.1933	0.41681	1				22508	5541	11156	11209	25883	25883					0.006947374861283606
NFSVFLSII	9	Unmodified	_NFSVFLSII_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2976562380791	2	520.294768	1038.57498	3.3609	0.0017486	0.16661	8.6684E-05	3.5275	0.0018353	520.2955469682157	72.659	0.46631	73.989	73.822	74.288	1.3297					30	14	3	0	0	0	0.37774	1	30478	30478		21.537	2.098	1	6680400	+		22509	14306	11157	11210	25884	25884					0.057238151084447964
NFSVFLSII	9	Unmodified	_NFSVFLSII_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2967407107353	2	520.294768	1038.57498	2.7463	0.0014289	0.91355	0.00047531	3.6599	0.0019042	520.2952038568525	72.138	0.3954	73.949	73.772	74.167	1.8101					23	12	2	0	0	0	0.12251	1	30256	30256		41.84	1.8899	1	6040200	+		22510	14306	11157	11210	25885	25885					0.057238151084447964
NFSVFLSII	9	Unmodified	_NFSVFLSII_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	520.294768	1038.57498	2.0667	0.0010753	0.45017	0.00023422	2.5169	0.0013095	520.2956638329496	74.399	0.1917	74.399	74.302	74.494	0	0.27095	-0.00010694	NaN	41.84	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243240	+		22511	14306	11157	11210							0.057238151084447964
NFSVFLSII	9	Unmodified	_NFSVFLSII_					0	0	0			REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	REV__L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|263|1|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	520.294768	1038.57498	2.5692	0.0013367	1.5273	0.00079465	4.0965	0.0021314	520.2956136679561	73.851	0.15971	74.176	74.073	74.233	0.32494	0.047693	0.0010139	NaN	41.84	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347630	+		22512	14306	11157	11210							0.057238151084447964
NFTSLFSNKPF	11	Unmodified	_NFTSLFSNKPF_					0	0	0		nc|ENSG00000116539|Q9NR48|ASH1L;ENSG00000116539|ENST00000392403|ASH1L;ASH1L|p.S1069Pfs*5|1|0.07|ENSG00000116539|chr1:155479664-155479665|CT/-|frameshift_variant	nc|ENSG00000116539|Q9NR48|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.3297607302666	2	651.32987	1300.64519	2.0313	0.001323	-0.54945	-0.00035787	1.4818	0.00096517	651.3293994957388	47.302	0.3856	48.684	48.504	48.89	1.3825					22	11	3	0	0	0	0.85967	1	19797	19797		12.241	0	1	1233200			22513	1971	11158	11211	25886	25886					0.006890687061968492
NFWFNYFRDK	10	Unmodified	_NFWFNYFRDK_					0	0	0		tr|A0A7D7A211|A0A7D7A211_9CLOTBacteriophageabortiveinfectionAbiHfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06510PE=4SV=1	tr|A0A7D7A211|A0A7D7A211_9CLOTBacteriophageabortiveinfectionAbiHfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06510PE=4SV=1	tr|A0A7D7A211|A0A7D7A211_9CLOTBacteriophageabortiveinfectionAbiHfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06510PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.5632202029228	3	479.56305	1435.66732	2.2844	0.0010955	-1.1319	-0.00054282	1.1525	0.0005527	479.5623863280928	48.293	0.78194	48.293	48.092	48.874	0					74	24	5	0	0	0	0.88022	1	20227	20227		1.7423	0.41263	1	3529900			22514	17249	11159	11212	25887	25887					-0.0330870682537352
NFYLSGVLL	9	Unmodified	_NFYLSGVLL_					0	0	0		ENSG00000168263|ENST00000382082|KCNV2	ENSG00000168263|ENST00000382082|KCNV2	ENSG00000168263|ENST00000382082|KCNV2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1025.576342761517	1	1025.56661	1024.55933	2.5418	0.0026068	1.4607	0.001498	4.0025	0.0041048	1025.568111967448	88.127	0.33656	88.127	87.967	88.304	0					21	10	3	0	0	0	0.63129	1	36904	36904		10.074	0.6908	1	1474600			22515	4024	11160	11213	25888	25888					0.04803528591401118
NGAALRHL	8	Unmodified	_NGAALRHL_					0	0	0			REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.2465087771416	2	426.245944	850.477334	0.8139	0.00034692	1.0533	0.00044897	1.8672	0.00079589	426.2462267416038	69.123	0.43483	69.123	68.83	69.265	0					39	13	4	0	0	0	0.89008	1	28738	28738		2.5775	0.51773	1	9689200	+		22516	15096	11161	11214	25889	25889					0.04611471022928981
NGAALRHL	8	Unmodified	_NGAALRHL_					0	0	0			REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.2472106814384	2	426.245944	850.477334	2.0477	0.00087281	1.9033	0.00081127	3.951	0.0016841	426.24625504032775	67.878	0.42706	69.256	69.096	69.523	1.3778					32	13	3	0	0	0	0.89008	1	28485	28485		2.5775	0.27475	1	7235700	+		22517	15096	11161	11214	25890	25890					0.04611471022928981
NGAALRHL	8	Unmodified	_NGAALRHL_					0	0	0			REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	426.2475768923759	2	426.245944	850.477334	1.6811	0.00071655	1.1211	0.00047786	2.8022	0.0011944	426.2462618489149	67.604	0.43505	69.474	69.208	69.643	1.87					32	13	3	0	0	0	0.89008	2	28307	28307;28354		2.5775	0.51773	1	5240500	+		22518	15096	11161	11214	25891;25892	25891					0.04611471022928981
NGAALRHL	8	Unmodified	_NGAALRHL_					0	0	0			REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	426.245944	850.477334	2.0477	0.00087281	1.9033	0.00081127	3.951	0.0016841	426.24625504032775	67.878	0.42706	69.256	69.096	69.523	1.3778	-0.017006	0.00052708	NaN	2.5775	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7235700	+		22519	15096	11161	11214							0.04611471022928981
NGAALRHL	8	Unmodified	_NGAALRHL_					0	0	0			REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	REV__tr|A0A553SPN6|A0A553SPN6_NIACINAD(P)/FAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_26695PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	426.245944	850.477334	1.6811	0.00071655	1.1211	0.00047786	2.8022	0.0011944	426.2462618489149	67.604	0.43505	69.474	69.208	69.643	1.87	0.20081	-0.00013974	NaN	2.5775	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5240500	+		22520	15096	11161	11214							0.04611471022928981
NGAAVAKA	8	Unmodified	_NGAAVAKA_					0	0	0			REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.1998168826103	2	351.20067	700.386788	-0.83205	-0.00029222	-0.70634	-0.00024807	-1.5384	-0.00054028	351.2003861379763	60.138	0.46751	60.138	59.944	60.412	0					29	15	2	0	0	0	0.89176	2	25046	25046;25092		0.79363	0	1	7660700	+		22521	10010;11049	11162	11215	25893;25894	25893					0.02461001974654664
NGAAVAKA	8	Unmodified	_NGAAVAKA_					0	0	0			REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2003356814384	2	351.20067	700.386788	0.65935	0.00023157	-3.49	-0.0012257	-2.8307	-0.00099414	351.19945508319546	58.916	0.45564	60.336	60.1	60.556	1.4196					23	14	2	0	0	0	0.89176	2	24669	24669;24716		0.79363	0	1	5859000	+		22522	10010;11049	11162	11215	25895;25896	25895					0.02461001974654664
NGAAVAKA	8	Unmodified	_NGAAVAKA_					0	0	0			REV__ENSG00000137076|ENST00000314888|TLN1;REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000137076|ENST00000314888|TLN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	351.1697570681572	2	351.20067	700.386788	0.65935	0.00023157	-3.49	-0.0012257	-2.8307	-0.00099414	351.19945508319546	58.916	0.45564	60.336	60.1	60.556	1.4196					23	14	2	0	0	0	2.3239	1	24657	24657		0	0	1	5859000	+		22523	10010;11049	11162	11215	25897	25897					0.02461001974654664
NGAGRGVS	8	Unmodified	_NGAGRGVS_					0	0	0			REV__ENST00000369571.2_1_1:114447562-114447658:-|nuORF	REV__ENST00000369571.2_1_1:114447562-114447658:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	359.1864501833916	2	359.185552	716.35655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.25	1	103.41	102.91	103.91	0.16445								0	0	0	1.0178	1	43504	43504		2.5775	0	1		+		22524	12648	11163	11216	25898	25898					-0.01297356690520246
NGAGRGVS	8	Unmodified	_NGAGRGVS_					0	0	0			REV__ENST00000369571.2_1_1:114447562-114447658:-|nuORF	REV__ENST00000369571.2_1_1:114447562-114447658:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	359.1857177615166	2	359.185552	716.35655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.21	1	103.39	102.89	103.89	0.18066								0	0	0	1.0178	1	43436	43436		2.5775	0	1		+		22525	12648	11163	11216	25899	25899					-0.01297356690520246
NGDCHTLIGV	10	Unmodified	_NGDCHTLIGV_					0	0	0		tr|A0A7D6VPH6|A0A7D6VPH6_9CLOTPorphobilinogendeaminaseOS=ClostridiumintestinaleOX=36845GN=hemCPE=3SV=1	tr|A0A7D6VPH6|A0A7D6VPH6_9CLOTPorphobilinogendeaminaseOS=ClostridiumintestinaleOX=36845GN=hemCPE=3SV=1	tr|A0A7D6VPH6|A0A7D6VPH6_9CLOTPorphobilinogendeaminaseOS=ClostridiumintestinaleOX=36845GN=hemCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.4988281130791	3	343.49917	1027.47568	-1.1625	-0.00039932	-3.1545	-0.0010836	-4.3171	-0.0014829	343.49918514977395	92.788	0.4827	92.788	92.53	93.013	0					61	15	5	0	0	0	0.60583	1	38740	38740		14.957	0	1	5956000			22526	16766	11164	11217	25900	25900					-0.036959508479640135
NGEALKIHL	9	Unmodified	_NGEALKIHL_					0	0	0		ENSG00000169418|ENST00000368680|NPR1;ENST00000368677.2_1_1:153661447-153665772:+|nuORF	ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.8203613162041	2	497.787641	993.56073	3.1219	0.0015541	0.16684	8.305E-05	3.2888	0.0016371	497.7879392937994	107.62	0.053574	107.78	107.73	107.79	0.15781					4	2	2	0	0	0	0.11833	1	46339	46339		4.3292	0	1	1967900			22527	4090	11165	11218	25901	25901					0.06369162680130103
NGECGRYK	8	Unmodified	_NGECGRYK_					0	0	0			REV__ENSG00000158901|ENST00000289953|WFDC8	REV__ENSG00000158901|ENST00000289953|WFDC8	MSMS	GG20161007_CRH_Patient100_A02_01	1	309.4752685427666	3	309.476476	925.4076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.796	1	22.796	22.296	23.296	0								0	0	0	1.0178	1	9494	9494		0.45834	0	1		+		22528	10565	11166	11219	25902	25902					-0.05808775707987479
NGFKYKLIGLI	11	Unmodified	_NGFKYKLIGLI_					0	0	0		tr|A0A7D7A3M9|A0A7D7A3M9_9CLOTHomoserinedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00425PE=3SV=1	tr|A0A7D7A3M9|A0A7D7A3M9_9CLOTHomoserinedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00425PE=3SV=1	tr|A0A7D7A3M9|A0A7D7A3M9_9CLOTHomoserinedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00425PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1954223513603	4	317.195862	1264.75434	-0.88261	-0.00027996	0.99948	0.00031703	0.11687	3.707E-05	317.19609650528974	34.745	0.40807	36.02	35.853	36.262	1.2746					87	40	3	0	0	0	1.0191	1	14616	14616		2.6312	0.37851	1	31566000			22529	17277	11167	11220	25903	25903					0.13255699396381715
NGGGGGGGAG	10	Unmodified	_NGGGGGGGAG_					0	0	0		ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion;ARID1A-FAM76A|1|fusion;ARID1A-FAM76A|2|fusion;ARID1A-FAM76A|5|fusion;ARID1A-FAM76A|3|fusion;ARID1A-FAM76A|4|fusion;ARID1A|p.W1073Mfs*32|1|0.43|ENSG00000117713|chr1:26771130-26771131|-/A|frameshift_variant;ARID1A|p.M1673Pfs*22|1|0.07|ENSG00000117713|chr1:26775597-26775604|GTAATGAT/-|frameshift_variant;nc|ENSG00000117713|O14497-2|ARID1A;ENSG00000117713|ENST00000324856|ARID1A	ARID1A-NUDC|1|fusion	ARID1A-NUDC|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	330.1374389529228	2	330.638434	659.262316	-1.763	-0.00058291	-0.20413	-6.7494E-05	-1.9671	-0.0006504	330.639174110422	75.285	0.44386	75.285	75.027	75.471	0					24	13	2	0	0	0	0.12561	1	31328	31328		0	0	1	855880			22530	76	11168	11221	25904	25904					-0.08094495512659705
NGGLGSLK	8	Unmodified	_NGGLGSLK_					0	0	0		ENST00000577662.1_1_17:63534239-63554825:-|nuORF;ENSG00000168646|ENST00000307078|AXIN2	ENST00000577662.1_1_17:63534239-63554825:-|nuORF	ENST00000577662.1_1_17:63534239-63554825:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.2134887576103	2	373.213778	744.413003	2.8162	0.001051	-3.1129	-0.0011618	-0.29673	-0.00011074	373.21230832213695	62.238	1.4902	64.195	63.305	64.795	1.9571					74	47	3	0	0	0	0.89176	1	26057	26057		0.79363	0	1	6385700			22531	4047	11169	11222	25905	25905					0.030572711461331892
NGGSSLAR	8	Unmodified	_NGGSSLAR_					0	0	0		tr|A0A553SUG9|A0A553SUG9_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_07010PE=4SV=1	tr|A0A553SUG9|A0A553SUG9_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_07010PE=4SV=1	tr|A0A553SUG9|A0A553SUG9_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_07010PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.7270995974541	2	381.198659	760.382765	-0.081621	-3.1114E-05	-2.9002	-0.0011055	-2.9818	-0.0011367	381.1974017110023	63.817	0.4263	63.817	63.587	64.013	0					33	13	3	0	0	0	2.3239	1	26557	26557		2.0598	1.2661	1	5824100			22532	16692	11170	11223	25906	25906					-0.007010875190530896
NGGYENTECFK	11	Unmodified	_NGGYENTECFK_					0	0	0			REV__ENSG00000169393|ENST00000339841|ELSPBP1	REV__ENSG00000169393|ENST00000339841|ELSPBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.1765319705009	3	421.176644	1260.5081	0.5362	0.00022583	-1.1045	-0.00046519	-0.5683	-0.00023935	421.17671566046533	13.903	0.56234	14.002	13.653	14.216	0.099441					42	17	3	0	0	0	1.0131	1	5745	5745		1.2148	0	1	1026400	+		22533	10947	11171	11224	25907	25907					-0.11173208235663878
NGHSGGGIPM	10	Unmodified	_NGHSGGGIPM_					0	0	0			REV__ENST00000370282.7_1_1:93646006-93646114:-|nuORF	REV__ENST00000370282.7_1_1:93646006-93646114:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	309.4747802615166	3	309.476476	925.4076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.686	1	22.686	22.186	23.186	0								0	0	0	0.66222	1	9444	9444		0.69767	0.23933	1		+		22534	12658	11172	11225	25908	25908					-0.058087757079761104
NGKSFGSI	8	Unmodified	_NGKSFGSI_					0	0	0			REV__tr|A0A7D7A5Z1|A0A7D7A5Z1_9CLOTType1glutamineamidotransferase-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08025PE=3SV=1	REV__tr|A0A7D7A5Z1|A0A7D7A5Z1_9CLOTType1glutamineamidotransferase-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08025PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.2128784060478	2	405.211235	808.407917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.263	1	91.283	90.783	91.783	1.0199								0	0	0	1.0178	1	38033	38033		2.3027	0	1		+		22535	15887	11173	11226	25909	25909					-0.0039503271646026406
NGLKSLSA	8	Unmodified	_NGLKSLSA_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000494058.5_1_6:31934804-31935971:+|nuORF;ENST00000461915.5_1_6:31934795-31936203:+|nuORF;ENST00000484835.1_1_6:31934891-31936687:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.2266723513603	2	395.226885	788.439217	1.5526	0.00061362	-2.0443	-0.00080795	-0.49169	-0.00019433	395.2259957037468	66.044	0.54657	67.443	67.152	67.699	1.3989					39	17	3	0	0	0	0.89176	1	27746	27746		0.79363	0	1	6401000			22536	5135	11174	11227	25910	25910					0.03653540317611714
NGPHKQVN	8	Unmodified	_NGPHKQVN_					0	0	0			REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	REV__nc|ENSG00000146530|Q8N2E2-3|VWDE	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	447.7665893435478	2	447.233033	892.451513	1.5795	0.00070639	3.3881	0.0015153	4.9675	0.0022216	447.2344686687426	73.509	0.45591	73.509	73.248	73.704	0					35	14	3	0	0	0	2.3239	1	30665	30665		2.3027	1.6124	1	6584700	+		22537	10306	11175	11228	25911	25911					0.0009857678066964581
NGPRAGPH	8	Unmodified	_NGPRAGPH_					0	0	0			REV__ENST00000525835.5_1_11:16628826-16628961:-|nuORF	REV__ENST00000525835.5_1_11:16628826-16628961:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	403.7387267947197	2	403.206818	804.399084	1.9352	0.0007803	3.9788	0.0016043	5.9141	0.0023846	403.2079971548485	67.066	0.46205	67.389	67.157	67.619	0.32269					35	15	3	0	0	0	2.3239	1	28071	28071		2.8892	2.8892	1	6441200	+		22538	13663	11176	11229	25912	25912					-0.010939615622874044
NGQVTLPWLL	10	Unmodified	_NGQVTLPWLL_					0	0	0			REV__ENST00000282120.6_1_2:85545669-85545816:-|nuORF	REV__ENST00000282120.6_1_2:85545669-85545816:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8861877322197	3	380.885241	1139.63389	0.27359	0.00010421	1.8291	0.00069667	2.1027	0.00080087	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.85617	1	21418	21418		6.1918	3.1196	1	18085000	+		22539	12260	11177	11230	25913	25913					0.06966291402773095
NGRGGGGG	8	Unmodified	_NGRGGGGG_					0	0	0		nc|ENSG00000100523|Q8NEL9-2|DDHD1;nc|ENSG00000100523|Q8NEL9-4|DDHD1;ENSG00000100523|ENST00000673822|DDHD1	nc|ENSG00000100523|Q8NEL9-2|DDHD1	nc|ENSG00000100523|Q8NEL9-2|DDHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.2928344607353	1	631.290662	630.283386	1.5275	0.00096429	2.416	0.0015252	3.9435	0.0024895	631.291824834902	102.3	0.21714	102.3	102.18	102.4	0					19	7	4	0	0	0	0.89198	2	42838	42838;42888		0	0	1	74752000			22540	1285	11178	11231	25914;25915	25914					-0.04654485413129805
NGRGGGGG	8	Unmodified	_NGRGGGGG_					0	0	0		nc|ENSG00000100523|Q8NEL9-2|DDHD1;nc|ENSG00000100523|Q8NEL9-4|DDHD1;ENSG00000100523|ENST00000673822|DDHD1	nc|ENSG00000100523|Q8NEL9-2|DDHD1	nc|ENSG00000100523|Q8NEL9-2|DDHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.2924682497978	1	631.290662	630.283386	2.6555	0.0016764	1.207	0.00076198	3.8625	0.0024384	631.2910271587689	102.28	0.22299	102.34	102.21	102.44	0.062813					17	7	3	0	0	0	0.89198	2	42802	42802;42849		0	0	1	65985000			22541	1285	11178	11231	25916;25917	25916					-0.04654485413129805
NGRHLGVV	8	Unmodified	_NGRHLGVV_					0	0	0		chr12:91002578-91007836|96|28.81|0.0|14.24|-|1|TE_info:L2a,L2a_dup124733,L2,LINE,donor,+,91007836,91008983|EPYC,None|10	chr12:91002578-91007836|96|28.81|0.0|14.24|-|1|TE_info:L2a,L2a_dup124733,L2,LINE,donor,+,91007836,91008983|EPYC,None|10	chr12:91002578-91007836|96|28.81|0.0|14.24|-|1|TE_info:L2a,L2a_dup124733,L2,LINE,donor,+,91007836,91008983|EPYC,None|10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.2465698122978	2	426.245944	850.477334	0.8139	0.00034692	1.0533	0.00044897	1.8672	0.00079589	426.2462267416038	69.123	0.43483	69.123	68.83	69.265	0					39	13	4	0	0	0	0.89176	1	28790	28790		0.79363	0	1	9689200			22542	195	11179	11232	25918	25918					0.04611471022963087
NGRPVGGR	8	Unmodified	_NGRPVGGR_					0	0	0			REV__ENST00000426393.5_1_1:63786716-63787081:-|nuORF	REV__ENST00000426393.5_1_1:63786716-63787081:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.7283813357353	2	406.727918	811.441283	0.23017	9.3615E-05	0.87791	0.00035707	1.1081	0.00045069	406.72826948375683	70.129	0.46781	70.129	69.866	70.333	0					39	14	3	0	0	0	0.89178	1	29191	29191		0.69038	0	1	9997400	+		22543	12998	11180	11233	25919	25919					0.028020138460988164
NGRSCFGV	8	Unmodified	_NGRSCFGV_					0	0	0		ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	ENSG00000185344|ENST00000330342|ATP6V0A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.1964294314384	2	420.195062	838.375571	1.0278	0.00043187	3.3914	0.001425	4.4191	0.0018569	420.19640826320096	58.8	0.44743	58.8	58.526	58.974	0					33	13	3	0	0	0	0.87276	2	24523	24474;24523		13.508	5.7604	1	9975000			22544	4742	11181	11234	25920;25921	25921					-0.05008143391114572
NGTKKIGK	8	Unmodified	_NGTKKIGK_					0	0	0			REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.2654296755791	2	423.263802	844.513051	3.1131	0.0013177	-0.45018	-0.00019055	2.6629	0.0011271	423.26336216959857	107.81	0.16229	107.96	107.86	108.03	0.15781					22	8	3	0	0	0	0.89176	1	46437	46437		0.79363	0	1	227360000	+		22545	13142	11182	11235	25922	25922					0.08457508479943954
NGTKKIGK	8	Unmodified	_NGTKKIGK_					0	0	0			REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.2653076052666	2	423.263802	844.513051	3.2443	0.0013732	-1.0086	-0.00042691	2.2357	0.00094628	423.2632134631898	107.77	0.1653	107.93	107.85	108.01	0.15795					22	8	3	0	0	0	0.89176	1	46373	46373		0.79363	0	1	171980000	+		22546	13142	11182	11235	25923	25923					0.08457508479943954
NGTKKIGK	8	Unmodified	_NGTKKIGK_					0	0	0			REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	423.263802	844.513051	3.1131	0.0013177	-0.45018	-0.00019055	2.6629	0.0011271	423.26336216959857	107.81	0.16229	107.96	107.86	108.03	0.15781	0.016	0.00023937	NaN	0.79363	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227360000	+		22547	13142	11182	11235							0.08457508479943954
NGTKKIGK	8	Unmodified	_NGTKKIGK_					0	0	0			REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	REV__ENST00000452206.5_1_2:201676440-201676509:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	423.263802	844.513051	3.2443	0.0013732	-1.0086	-0.00042691	2.2357	0.00094628	423.2632134631898	107.77	0.1653	107.93	107.85	108.01	0.15795	-0.016	-0.00023336	NaN	0.79363	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	171980000	+		22548	13142	11182	11235							0.08457508479943954
NGWGWGGG	8	Unmodified	_NGWGWGGG_					0	0	0			REV__nc|ENSG00000225855|Q66K80-2|RUSC1-AS1	REV__nc|ENSG00000225855|Q66K80-2|RUSC1-AS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.6684448122978	2	395.666995	789.319437	1.973	0.00078064	1.3596	0.00053795	3.3326	0.0013186	395.6673639641361	65.098	0.22479	65.424	65.323	65.548	0.32689					11	6	2	0	0	0	0.89198	1	27265	27265		0	0	1	583890	+		22549	14542	11183	11236	25924	25924					-0.0836502823626688
NHEDDLDRK	9	Unmodified	_NHEDDLDRK_					0	0	0		ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5125610232353	3	381.179265	1140.51596	-1.1715	-0.00044655	0.68478	0.00026102	-0.48673	-0.00018553	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.30098	1	8008	8008		29.841	3.8199	1	7559600			22550	1662	11184	11237	25925	25925					-0.04867312923852296
NHEDDLDRK	9	Unmodified	_NHEDDLDRK_					0	0	0		ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.2570373415947	3	381.179265	1140.51596	1.398	0.00053289	-1.4868	-0.00056674	-0.088797	-3.3848E-05	381.51177571552097	36.492	0.37228	36.794	36.653	37.025	0.30197					35	25	2	0	0	0	0.11619	1	15350	15350		4.1895	0	1	1388000			22551	1662	11184	11237	25926	25926					-0.04867312923852296
NHEDDLDRK	9	Unmodified	_NHEDDLDRK_					0	0	0		ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.1814453005791	3	381.179265	1140.51596	1.6908	0.00064451	-1.2462	-0.00047504	0.44459	0.00016947	381.5120313730317	44.637	1.2143	44.964	44.425	45.639	0.32674					87	40	3	0	0	0	0.11539	1	18888	18888		4.897	1.5774	1	1639000			22552	1662	11184	11237	25927	25927					-0.04867312923852296
NHEDDLDRK	9	Unmodified	_NHEDDLDRK_					0	0	0		ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	ENSG00000109182|ENST00000226432|CWH43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.7481262087822	3	381.179265	1140.51596	1.5622	0.00059549	-1.4605	-0.0005567	0.10176	3.8787E-05	381.5123003338605	39.382	1.6159	39.694	38.892	40.508	0.31263					99	52	3	0	0	0	0.11716	1	16676	16676		8.1555	2.3721	1	1806400			22553	1662	11184	11237	25928	25928					-0.04867312923852296
NHEEYFPF	8	Unmodified	_NHEEYFPF_					0	0	0			REV__tr|A0A553SJL9|A0A553SJL9_NIACIDUF2225domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16825PE=4SV=1	REV__tr|A0A553SJL9|A0A553SJL9_NIACIDUF2225domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16825PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.3160888552666	2	541.732532	1081.45051	1.0471	0.00056726	-3.0452	-0.0016497	-1.9981	-0.0010824	541.7310947154549	56.503	0.39527	58.472	58.18	58.575	1.9684					18	12	2	0	0	0	2.3239	1	23577	23577		8.5933	4.6489	1	1614100	+		22554	14911	11185	11238	25929	25929					-0.08695682378925085
NHFAAGGF	8	Unmodified	_NHFAAGGF_					0	0	0		nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112|MECOM;ENSG00000085276|ENST00000651503|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	410.6910888552666	2	410.69047	819.366387	2.0035	0.00082281	-0.11542	-4.7403E-05	1.8881	0.0007754	410.6901964480485	67.075	0.55733	67.398	67.094	67.651	0.32269					47	18	3	0	0	0	0.89178	1	28095	28095		0.69038	0	1	26729000			22555	1060	11186	11239	25930	25930					-0.05052168685142533
NHFERWFELKE	11	Unmodified	_NHFERWFELKE_					0	0	0		tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	384.4426757693291	4	384.441392	1533.73646	-1.1755	-0.0004519	3.4265	0.0013173	2.251	0.00086538	384.44313470584916	19.398	1.3957	19.398	19.173	20.568	0					130	44	6	0	0	0	0.97115	1	8078	8078		5.5233	1.4067	1	89240000			22556	16542	11187	11240	25931	25931					-0.009056675964529859
NHFERWFELKE	11	Unmodified	_NHFERWFELKE_					0	0	0		tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2543823122978	3	512.252764	1533.73646	1.0335	0.00052942	2.1106	0.0010811	3.1441	0.0016106	512.2544506027472	19.4	2.9513	19.4	19.045	21.997	0					231	94	7	0	0	0	0.91757	2	8169	8169;8262		8.7518	2.2173	1	230570000			22557	16542	11187	11240	25932;25933	25932					-0.009056675964529859
NHFERWFELKE	11	Unmodified	_NHFERWFELKE_					0	0	0		tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.5890991091728	3	512.252764	1533.73646	0.67951	0.00034808	2.9425	0.0015073	3.622	0.0018554	512.2546364848682	18.925	0.85174	19.118	18.893	19.744	0.19342					101	27	7	0	0	0	0.96543	1	7803	7803		5.8681	1.7515	1	52963000			22558	16542	11187	11240	25934	25934					-0.009056675964529859
NHFERWFELKE	11	Unmodified	_NHFERWFELKE_					0	0	0		tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	tr|A0A553SR55|A0A553SR55_NIACIMerRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2546874880791	3	512.252764	1533.73646	0.72162	0.00036965	2.6047	0.0013343	3.3263	0.0017039	512.254329040137	17.678	0.59384	18.98	18.692	19.286	1.3023					49	19	5	0	0	0	0.9326	1	7314	7314		7.846	1.2226	1	15279000			22559	16542	11187	11240	25935	25935					-0.009056675964529859
NHFMYREN	8	Unmodified	_NHFMYREN_					0	0	0		tr|A0A553SPI1|A0A553SPI1_NIACIDUF2087domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26420PE=4SV=1	tr|A0A553SPI1|A0A553SPI1_NIACIDUF2087domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26420PE=4SV=1	tr|A0A553SPI1|A0A553SPI1_NIACIDUF2087domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26420PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017944216728	3	370.831031	1109.47126	1.846	0.00068455	-0.049302	-1.8283E-05	1.7967	0.00066627	371.1649954187739	79.074	0.15396	80.341	80.224	80.378	1.2668					6	4	2	0	0	0	2.3239	1	33192	33192		0	0	1	334740			22560	16471	11188	11241	25936	25936					-0.07909415270887621
NHFSGPISLL	10	Unmodified	_NHFSGPISLL_					0	0	0			REV__ENST00000378312.8_1_11:57507727-57507943:+|nuORF	REV__ENST00000378312.8_1_11:57507727-57507943:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.7936889529228	2	542.792924	1083.57129	2.0263	0.0010999	0.78757	0.00042749	2.8139	0.0015274	542.793079031577	90.637	0.461	90.637	90.382	90.843	0					23	14	2	0	0	0	0.88314	1	37853	37853		3.2813	0.70383	1	1185800	+		22561	12739	11189	11242	25937	25937					0.03285145334598383
NHGEAKNDEK	10	Unmodified	_NHGEAKNDEK_					0	0	0		nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF	nc|ENSG00000074621|O60721-3|SLC24A1	nc|ENSG00000074621|O60721-3|SLC24A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5124694705009	3	381.179265	1140.51596	-1.5649	-0.0005965	-0.12688	-4.8362E-05	-1.6918	-0.00064486	381.5126641813179	11.436	6.546	11.436	10.986	17.532	0					581	210	4	0	0	0	0.22673	20	6028	4587;4687;4806;4948;5093;5148;5198;5251;5610;5700;5794;5844;5924;6028;6079;6170;6211;6365;6506;6690		39.213	5.4398	1	26123000			22562	916	11190	11243	25938;25939;25940;25941;25942;25943;25944;25945;25946;25947;25948;25949;25950;25951;25952;25953;25954;25955;25956;25957	25951					-0.048673129238750334
NHGEAKNDEK	10	Unmodified	_NHGEAKNDEK_					0	0	0		nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF	nc|ENSG00000074621|O60721-3|SLC24A1	nc|ENSG00000074621|O60721-3|SLC24A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5112182497978	3	381.179265	1140.51596	-1.1715	-0.00044655	0.68478	0.00026102	-0.48673	-0.00018553	381.18181589621304	19.048	17.039	19.048	15.87	32.908	0					1228	556	3	0	0	0	0.38174	27	6768	6768;7002;7133;7289;7457;7548;7684;7786;7878;7937;8382;8508;8608;8708;8754;8899;8954;9115;9158;9319;9697;9824;10902;11075;12619;13136;13747		35.612	0	1	7559600			22563	916	11190	11243	25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969;25970;25971;25972;25973;25974;25975;25976;25977;25978;25979;25980;25981;25982;25983;25984	25958					-0.048673129238750334
NHGEAKNDEK	10	Unmodified	_NHGEAKNDEK_					0	0	0		nc|ENSG00000074621|O60721-3|SLC24A1;nc|ENSG00000074621|O60721-2|SLC24A1;ENSG00000074621|ENST00000261892|SLC24A1;ENST00000434116.6_1_15:65916409-65944223:+|nuORF	nc|ENSG00000074621|O60721-3|SLC24A1	nc|ENSG00000074621|O60721-3|SLC24A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5144531130791	3	381.179265	1140.51596	-0.51296	-0.00019553	-1.018	-0.00038805	-1.531	-0.00058358	381.5120625082665	36.936	0.54972	36.936	36.604	37.153	0					58	29	3	0	0	0	0.70618	2	15418	15418;15459		15.739	0	1	2145200			22564	916	11190	11243	25985;25986	25985					-0.048673129238750334
NHGEVLDDWS	10	Unmodified	_NHGEVLDDWS_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2832824587822	3	391.171999	1170.49417	0.43718	0.00017101	-1.0977	-0.0004294	-0.66054	-0.00025839	391.17303476165574	17.081	0.68539	17.232	16.854	17.54	0.15094					37	24	2	0	0	0	0.12549	1	6932	6932		3.5871	0	1	615050	+		22565	9360	11191	11244	25987	25987					-0.08426117672433975
NHGEVLDDWS	10	Unmodified	_NHGEVLDDWS_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2835876345634	3	391.171999	1170.49417	0.32788	0.00012826	-0.39505	-0.00015453	-0.067167	-2.6274E-05	391.1722300935541	15.088	0.34148	15.201	14.976	15.317	0.11295					14	10	2	0	0	0	0.12549	1	6299	6299		1.7423	0	1	678400	+		22566	9360	11191	11244	25988	25988					-0.08426117672433975
NHGLCQWQW	9	Unmodified	_NHGLCQWQW_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.174909	1170.5029	-0.6477	-0.00025336	-4.3944	-0.001719	-5.0421	-0.0019724	391.1740765248798	26.788	0.75606	26.788	26.475	27.231	0					56	24	4	0	0	0	0.11837	1	11141	11141		4.897	0.36815	1	836480	+		22567	8818	11192	11245	25989	25989					-0.07553422516934916
NHGLCQWQW	9	Unmodified	_NHGLCQWQW_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.174909	1170.5029	-0.82365	-0.00032219	-4.3101	-0.001686	-5.1338	-0.0020082	391.1741635141673	23.229	0.78077	23.229	22.694	23.475	0					46	25	2	0	0	0	0.11837	1	9640	9640		2.4985	0.75621	1	604480	+		22568	8818	11192	11245	25990	25990					-0.07553422516934916
NHGWMFEMH	9	Unmodified	_NHGWMFEMH_					0	0	0		CPT1B|p.Y134N|1|0.27|ENSG00000205560|chr22:50576916-50576916|A/T|missense_variant	CPT1B|p.Y134N|1|0.27|ENSG00000205560|chr22:50576916-50576916|A/T|missense_variant	CPT1B|p.Y134N|1|0.27|ENSG00000205560|chr22:50576916-50576916|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.8264343142509	3	396.828633	1187.46407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.951	1	9.951	9.451	10.451	0								0	0	0	0.42693	1	4099	4099		4.897	1.0207	1				22569	371	11193	11246	25991	25991					-0.12216471142960472
NHKKWKVKYYK	11	Unmodified	_NHKKWKVKYYK_					0	0	0		TOP2A-STAU1|2|fusion;TOP2A-STAU1|1|fusion;nc|ENSG00000131747|P11388-4|TOP2A;nc|ENSG00000131747|P11388-3|TOP2A;nc|ENSG00000131747|P11388-2|TOP2A;ENSG00000131747|ENST00000423485|TOP2A	TOP2A-STAU1|2|fusion	TOP2A-STAU1|2|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5132324099541	4	381.222677	1520.8616	-0.67942	-0.00025901	0.69335	0.00026432	0.013923	5.3079E-06	381.2228491274526	32.895	0.31335	32.895	32.627	32.94	0					12	9	2	0	0	0	0.14606	1	13700	13700		0.45452	0.35968	1	1189200			22570	16031	11194	11247	25992	25992					0.12200669330604796
NHKTYWQF	8	Unmodified	_NHKTYWQF_					0	0	0		nc|ENSG00000134812|P27352-2|CBLIF;ENSG00000134812|ENST00000257248|CBLIF	nc|ENSG00000134812|P27352-2|CBLIF	nc|ENSG00000134812|P27352-2|CBLIF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.2729980349541	2	562.269616	1122.52468	2.0772	0.001168	3.886	0.002185	5.9632	0.0033529	562.2712194079163	40.816	0.31635	42.708	42.515	42.832	1.8927					14	9	2	0	0	0	0.77833	1	17120	17120		23.148	0	1	716710			22571	2637	11195	11248	25993	25993					-0.03168294496708768
NHLQLCFI	8	Unmodified	_NHLQLCFI_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|206|3|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|206|3|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|206|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.2561828494072	2	494.257662	986.500772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.82	1	104.88	104.38	105.38	0.056801								0	0	0	1.0178	1	44302	44302		2.5775	0.27475	1				22572	7599	11196	11249	25994	25994					0.006981487452662805
NHLREKNHHI	10	Unmodified	_NHLREKNHHI_					0	0	0		ENSG00000178395|ENST00000366875|CCDC185	ENSG00000178395|ENST00000366875|CCDC185	ENSG00000178395|ENST00000366875|CCDC185	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2359802126884	3	433.233927	1296.67995	2.2864	0.00099055	0.51084	0.00022131	2.7972	0.0012119	433.23406205528755	40.981	6.4739	42.306	41.623	48.097	1.3254					333	206	4	0	0	0	0.85124	1	18641	18641		6.1918	1.4759	1	9219400			22573	4483	11197	11250	25995	25995					0.043477493575664994
NHPHPDEQ	8	Unmodified	_NHPHPDEQ_					0	0	0			REV__ENST00000526143.2_1_11:118795970-118796195:-|nuORF	REV__ENST00000526143.2_1_11:118795970-118796195:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	325.2036010622978	3	325.142262	972.404957	0.87593	0.0002848	0.1189	3.8659E-05	0.99483	0.00032346	325.1431466312892	66.595	0.74082	68.484	68.245	68.986	1.8889					34	23	3	0	0	0	2.3239	1	27879	27879		0.45834	0	1	481960	+		22574	13665	11198	11251	25996	25996					-0.08234907841290351
NHQLLRARRRR	11	Unmodified	_NHQLLRARRRR_					0	0	0			REV__sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	REV__sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.6362487673759	3	492.634536	1474.88178	5.4324	0.0026762	0.14045	6.9189E-05	5.5729	0.0027454	492.6344348167474	88.124	1.4719	89.181	88.639	90.111	1.0562					103	45	4	0	0	0	1.0395	1	37265	37265		0.08335	0.08335	1	2320000	+		22575	14662	11199	11252	25997	25997					0.16333277833746251
NHRCEKDDK	9	Unmodified	_NHRCEKDDK_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5097534060478	3	382.176978	1143.5091	0.059841	2.287E-05	3.3548	0.0012821	3.4146	0.001305	382.1781112864646	8.7771	0.28514	8.8534	8.7847	9.0698	0.07632					26	19	2	0	0	0	0.11716	1	3657	3657		8.1555	0	1	203030	+		22576	15391	11200	11253	25998	25998					-0.0569094907609724
NHRCEKDDK	9	Unmodified	_NHRCEKDDK_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5102111697197	3	382.176978	1143.5091	0.060017	2.2937E-05	3.2628	0.001247	3.3229	0.0012699	382.17812312978583	4.0969	0.34386	4.1989	3.9588	4.3027	0.10199					27	19	2	0	0	0	0.11716	1	1608	1608		8.1555	1.4324	1	205750	+		22577	15391	11200	11253	25999	25999					-0.0569094907609724
NHSNSHVF	8	Unmodified	_NHSNSHVF_					0	0	0		ENSG00000081248|ENST00000362061|CACNA1S	ENSG00000081248|ENST00000362061|CACNA1S	ENSG00000081248|ENST00000362061|CACNA1S	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7122985720634	3	314.478986	940.415128	-0.59713	-0.00018779	2.7509	0.00086511	2.1538	0.00067733	314.4797610927981	31.753	0.18501	33.034	32.895	33.08	1.2813					8	5	2	0	0	0	2.3239	1	13266	13266		0.45834	0	1	206810			22578	1019	11201	11254	26000	26000					-0.057463001160499516
NHTTDYYEK	9	Unmodified	_NHTTDYYEK_					0	0	0		tr|A0A553STM2|A0A553STM2_NIACINAD(P)-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05390PE=4SV=1	tr|A0A553STM2|A0A553STM2_NIACINAD(P)-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05390PE=4SV=1	tr|A0A553STM2|A0A553STM2_NIACINAD(P)-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05390PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	390.840249	1169.49892	0.61002	0.00023842	-0.52799	-0.00020636	0.082029	3.206E-05	391.1734154599233	20.459	0.74932	20.669	20.071	20.821	0.21024					33	23	2	0	0	0	0.11837	1	8296	8296		2.4985	0	1	404280			22579	16660	11202	11255	26001	26001					-0.07905233529663747
NHVGGSIY	8	Unmodified	_NHVGGSIY_					0	0	0			REV__ENSG00000197705|ENST00000359358|KLHL14	REV__ENSG00000197705|ENST00000359358|KLHL14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.7096435427666	2	423.70886	845.403166	-0.18455	-7.8194E-05	-0.43221	-0.00018313	-0.61676	-0.00026132	423.7092926892964	16.509	0.63331	16.509	16.213	16.847	0					60	19	5	0	0	0	0.87935	1	6954	6954		9.3474	3.587	1	3092900	+		22580	11688	11203	11256	26002	26002					-0.025719168592331698
NHVGGSIY	8	Unmodified	_NHVGGSIY_					0	0	0			REV__ENSG00000197705|ENST00000359358|KLHL14	REV__ENSG00000197705|ENST00000359358|KLHL14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	424.3047973513603	2	423.70886	845.403166	0.69756	0.00029556	-1.664	-0.00070504	-0.96641	-0.00040948	423.70842256512526	16.434	0.42626	16.575	16.365	16.792	0.14116					29	15	3	0	0	0	2.3239	1	6876	6876		9.3474	3.587	1	1031400	+		22581	11688	11203	11256	26003	26003					-0.025719168592331698
NHWGGPAV	8	Unmodified	_NHWGGPAV_					0	0	0			REV__nc|ENSG00000180900|Q14160|SCRIB	REV__nc|ENSG00000180900|Q14160|SCRIB	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3164550662041	2	419.203744	836.392936	2.0803	0.00087206	1.1853	0.00049687	3.2655	0.0013689	419.2045665716504	67.032	0.37221	67.354	67.157	67.529	0.32269					22	12	2	0	0	0	2.3239	1	27976	27976		0.79363	0	1	2339500	+		22582	11306	11204	11257	26004	26004					-0.03180479793809354
NIASIGSTIFL	11	Unmodified	_NIASIGSTIFL_					0	0	0		ENSG00000213064|ENST00000271375|SFT2D2	ENSG00000213064|ENST00000271375|SFT2D2	ENSG00000213064|ENST00000271375|SFT2D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3237792849541	2	568.321514	1134.62847	3.8847	0.0022077	0.89028	0.00050597	4.775	0.0027137	568.3219472741096	82.309	0.25397	83.522	83.38	83.634	1.2125					10	7	2	0	0	0	0.90709	1	34565	34565		9.3831	0	1	464670			22583	5211	11205	11258	26005	26005					0.06654567820282864
NIASIGSTIFL	11	Unmodified	_NIASIGSTIFL_					0	0	0		ENSG00000213064|ENST00000271375|SFT2D2	ENSG00000213064|ENST00000271375|SFT2D2	ENSG00000213064|ENST00000271375|SFT2D2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	568.321514	1134.62847	2.0154	0.0011454	3.3155	0.0018843	5.3309	0.0030297	568.3234832150014	83.747	0.15841	83.747	83.658	83.816	0	0.11281	0.00071844	NaN	9.3831	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277010			22584	5211	11205	11258							0.06654567820282864
NIDEETLLV	9	Unmodified	_NIDEETLLV_					0	0	0			REV__tr|A0A7D6ZWD5|A0A7D6ZWD5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17385PE=4SV=1	REV__tr|A0A7D6ZWD5|A0A7D6ZWD5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.2737304568291	2	523.274229	1044.53391	1.8954	0.00099182	-2.2593	-0.0011822	-0.36387	-0.00019041	523.2732820742702	50.386	0.59279	50.715	50.419	51.012	0.32824					70	18	5	0	0	0	0.59203	1	21207	21207		11.64	0.81637	1	32164000	+		22585	15746	11206	11259	26006	26006					0.013420092782780557
NIDEGPLAF	9	Unmodified	_NIDEGPLAF_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	975.4799072146416	1	975.478188	974.470912	2.9315	0.0028597	0.18289	0.00017841	3.1144	0.0030381	975.4780725035306	60.408	0.51707	61.828	61.478	61.995	1.4196					27	16	2	0	0	0	0.063746	1	25335	25335		62.573	24.422	1	1743900			22586	2688	11207	11260	26007	26007					-0.01734511719087095
NIDEGPLAF	9	Unmodified	_NIDEGPLAF_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	975.4839965701103	1	975.478188	974.470912	2.8889	0.0028181	0.080276	7.8307E-05	2.9692	0.0028964	975.4792914005435	59.934	0.27972	61.903	61.733	62.012	1.969					16	8	2	0	0	0	0.040497	1	25159	25159		75.761	37.61	1	1530300			22587	2688	11207	11260	26008	26008					-0.01734511719087095
NIFKLLLIHV	10	Unmodified	_NIFKLLLIHV_					0	0	0			REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	REV__ENST00000319715.8_2_16:24551838-24551922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1987182497978	4	303.198405	1208.76451	-0.59179	-0.00017943	1.4555	0.00044131	0.86373	0.00026188	303.198840787667	31.777	0.5769	33.058	32.625	33.202	1.2813					51	18	3	0	0	0	0.8974	1	13286	13286		1.7423	0.52744	1	6776900	+		22588	12399	11208	11261	26009	26009					0.1684830712160874
NIFPNPEATFV	11	Unmodified	_NIFPNPEATFV_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553488-16553881:-|nuORF	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.8174926638603	2	624.816596	1247.61864	2.903	0.0018138	-2.1136	-0.0013206	0.7894	0.00049323	624.8149582657321	74.768	0.36512	76.074	75.817	76.182	1.3063					21	11	2	0	0	0	0.54522	1	31354	31354		22.736	9.6938	1	1522200			22589	1163	11209	11262	26010	26010					0.004733798148663482
NIFPNPEATFV	11	Unmodified	_NIFPNPEATFV_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H;ENST00000537175.1_1_12:16553488-16553881:-|nuORF	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8137695193291	2	624.816596	1247.61864	2.4056	0.0015031	-2.8675	-0.0017917	-0.46191	-0.00028861	624.8136544735552	74.27	0.34171	76.066	75.9	76.242	1.7962					24	10	3	0	0	0	0.24501	1	31166	31166		36.506	14.969	1	1425900			22590	1163	11209	11262	26011	26011					0.004733798148663482
NIFRNVEV	8	Unmodified	_NIFRNVEV_					0	0	0		ENSG00000155876|ENST00000380527|RRAGA;ENSG00000083750|ENST00000374941|RRAGB;nc|ENSG00000083750|Q5VZM2|RRAGB;ENST00000498762.1_1_X:55748624-55758085:+|nuORF	ENSG00000155876|ENST00000380527|RRAGA	ENSG00000155876|ENST00000380527|RRAGA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7728759646416	2	495.771991	989.529429	1.6701	0.00082797	-0.55848	-0.00027688	1.1116	0.0005511	495.7717261473381	38.493	0.78333	39.79	39.506	40.29	1.2961					71	25	5	0	0	0	0.06621	4	16092	16092;16140;16179;16224		123.45	38.179	1	118210000			22591	1043	11210	11263	26012;26013;26014;26015	26012					0.03424589646044751
NIFRNVEV	8	Unmodified	_NIFRNVEV_					0	0	0		ENSG00000155876|ENST00000380527|RRAGA;ENSG00000083750|ENST00000374941|RRAGB;nc|ENSG00000083750|Q5VZM2|RRAGB;ENST00000498762.1_1_X:55748624-55758085:+|nuORF	ENSG00000155876|ENST00000380527|RRAGA	ENSG00000155876|ENST00000380527|RRAGA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7728759646416	2	495.771991	989.529429	0.8119	0.00040252	-0.69844	-0.00034627	0.11345	5.6247E-05	495.77164788960613	37.864	0.82694	39.684	39.429	40.256	1.8202					71	26	5	0	0	0	0.058963	4	15816	15816;15859;15898;15953		123.45	41.56	1	112110000			22592	1043	11210	11263	26016;26017;26018;26019	26016					0.03424589646044751
NIGELGVLL	9	Unmodified	_NIGELGVLL_					0	0	0			REV__ENSG00000140274|ENST00000323030|DUOXA2	REV__ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2785827517509	2	464.279118	926.543683	1.1185	0.00051929	-0.49857	-0.00023148	0.61992	0.00028782	464.27872089307215	58.001	0.33257	59.97	59.784	60.117	1.969					20	10	3	0	0	0	0.10473	1	24319	24319		47.749	0	1	4172600	+		22593	10119	11211	11264	26020	26020					0.07747242074333371
NIHGGSVY	8	Unmodified	_NIHGGSVY_					0	0	0			REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.7093078494072	2	423.70886	845.403166	-0.18455	-7.8194E-05	-0.43221	-0.00018313	-0.61676	-0.00026132	423.7092926892964	16.509	0.63331	16.509	16.213	16.847	0					60	19	5	0	0	0	0.45419	2	6846	6803;6846		50.855	15.955	1	3092900	+		22594	10363	11212	11265	26021;26022	26022					-0.025719168592331698
NIHGGSVY	8	Unmodified	_NIHGGSVY_					0	0	0			REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	REV__ENST00000460787.1_1_11:75137492-75141101:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.7090637087822	2	423.70886	845.403166	0.69756	0.00029556	-1.664	-0.00070504	-0.96641	-0.00040948	423.70842256512526	16.434	0.42626	16.575	16.365	16.792	0.14116					29	15	3	0	0	0	0.79422	1	6804	6804		21.747	8.2388	1	1031400	+		22595	10363	11212	11265	26023	26023					-0.025719168592331698
NIHTVKKLFE	10	Unmodified	_NIHTVKKLFE_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2392455935478	3	410.239796	1227.69756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.71	1	103.71	103.21	104.21	0								0	0	0	0.66218	1	43604	43604		0.77653	0	1				22596	2354	11213	11266	26024	26024					0.0928165183981946
NIIAKKIVL	9	Unmodified	_NIIAKKIVL_					0	0	0		ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3512756228447	2	506.349877	1010.6852	0.93981	0.00047587	0.022159	1.122E-05	0.96197	0.00048709	506.349735110361	31.692	0.18413	32.973	32.865	33.049	1.2813					9	5	2	0	0	0	0.12216	1	13289	13289		37.974	11.09	1	1012000			22597	1933	11214	11267	26025	26025					0.18028660167453836
NIIAKKIVL	9	Unmodified	_NIIAKKIVL_					0	0	0		ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	ENSG00000115758|ENST00000234111|ODC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	506.349877	1010.6852	0.85792	0.00043441	0.25302	0.00012811	1.1109	0.00056252	506.35016740203207	31.118	0.21422	32.942	32.773	32.987	1.8246	-0.015518	0.00013422	NaN	37.974	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603830			22598	1933	11214	11267							0.18028660167453836
NIIDLVKKY	9	Unmodified	_NIIDLVKKY_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3;ENST00000471989.5_1_17:40475276-40475366:-|nuORF	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3378784060478	2	553.334424	1104.6543	1.3687	0.00075736	2.7593	0.0015268	4.128	0.0022842	553.3366370178264	48.953	0.21648	50.341	50.202	50.418	1.388					11	6	2	0	0	0	0.22861	1	20503	20503		29.841	6.6922	1	1047400			22599	4044	11215	11268	26026	26026					0.10615462062582992
NIIDLVKKY	9	Unmodified	_NIIDLVKKY_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3;ENST00000471989.5_1_17:40475276-40475366:-|nuORF	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3358642458916	2	553.334424	1104.6543	2.0094	0.0011119	-0.51609	-0.00028557	1.4934	0.00082633	553.3350360097935	48.397	0.18521	50.374	50.297	50.483	1.9772					9	5	2	0	0	0	0.21592	1	20281	20281		31.268	8.1199	1	936740			22600	4044	11215	11268	26027	26027					0.10615462062582992
NIILGKENV	9	Unmodified	_NIILGKENV_					0	0	0		tr|A0A7D6VS94|A0A7D6VS94_9CLOTPeptidasedomain-containingABCtransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22100PE=4SV=1	tr|A0A7D6VS94|A0A7D6VS94_9CLOTPeptidasedomain-containingABCtransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22100PE=4SV=1	tr|A0A7D6VS94|A0A7D6VS94_9CLOTPeptidasedomain-containingABCtransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2950317263603	2	500.295299	998.576045	1.3311	0.00066594	0.29137	0.00014577	1.6225	0.00081171	500.2953205582272	39.338	0.3394	41.174	40.944	41.283	1.8366					16	10	2	0	0	0	0.12251	1	16473	16473		41.84	0	1	1573200			22601	16859	11216	11269	26028	26028					0.07670029477333173
NIIPRFVQV	9	Unmodified	_NIIPRFVQV_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3274413943291	2	543.326934	1084.63931	1.7714	0.00096247	-0.56	-0.00030426	1.2114	0.0006582	543.3261953730085	58.835	0.41471	58.835	58.59	59.005	0					24	12	3	0	0	0	0.10993	1	24531	24531		46.021	15.384	1	1514700			22602	4221	11217	11270	26029	26029					0.10038014985207155
NIIPRFVQV	9	Unmodified	_NIIPRFVQV_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3275024294853	2	543.326934	1084.63931	2.4465	0.0013292	-2.0685	-0.0011238	0.378	0.00020538	543.3248186862027	58.298	0.44359	58.621	58.3	58.744	0.32298					25	13	3	0	0	0	0.083604	2	24425	24425;24476		54.774	16.8	1	1592100			22603	4221	11217	11270	26030;26031	26030					0.10038014985207155
NIIPRFVQV	9	Unmodified	_NIIPRFVQV_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3278686404228	2	543.326934	1084.63931	1.4736	0.00080067	-0.51336	-0.00027892	0.96028	0.00052175	543.3266126042572	57.063	0.39043	58.477	58.276	58.667	1.4145					31	12	3	0	0	0	0.0092758	2	23894	23894;23946		108	54.421	1	11593000			22604	4221	11217	11270	26032;26033	26032					0.10038014985207155
NIIPRFVQV	9	Unmodified	_NIIPRFVQV_					0	0	0		nc|ENSG00000196369|P0DMP2|SRGAP2B;ENSG00000196369|ENST00000641863|SRGAP2B;ENSG00000171943|ENST00000367123|SRGAP2C;SRGAP2|p.D724Vfs*88|1|0.04|ENSG00000266028|chr1:206450460-206450460|A/-|frameshift_variant;ENSG00000266028|ENST00000573034|SRGAP2	nc|ENSG00000196369|P0DMP2|SRGAP2B	nc|ENSG00000196369|P0DMP2|SRGAP2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3275634646416	2	543.326934	1084.63931	0.99105	0.00053847	0.68053	0.00036975	1.6716	0.00090822	543.3270791764616	56.507	0.42119	58.475	58.241	58.662	1.9684					35	13	4	0	0	0	0.0092758	2	23675	23675;23727		108	53.223	1	10357000			22605	4221	11217	11270	26034;26035	26034					0.10038014985207155
NIISVFGFAL	10	Unmodified	_NIISVFGFAL_					0	0	0		tr|A0A7D6VNF4|A0A7D6VNF4_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17625PE=4SV=1	tr|A0A7D6VNF4|A0A7D6VNF4_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17625PE=4SV=1	tr|A0A7D6VNF4|A0A7D6VNF4_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17625PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3139526247978	2	540.808042	1079.60153	1.8499	0.0010004	2.4188	0.0013081	4.2686	0.0023085	540.8079946279687	49.233	0.71236	50.624	50.298	51.011	1.3911					62	22	4	0	0	0	0.6819	1	20670	20670		19.257	0	1	4501000			22606	16731	11218	11271	26036	26036					0.06491503999768611
NIKKFKFLK	9	Unmodified	_NIKKFKFLK_					0	0	0			REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3778564333916	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.629	1	31.912	31.412	32.412	1.2825								0	0	0	0.42693	1	12853	12853		0.6015	0	1		+		22607	15586	11219	11272	26037	26037					0.16252037950107479
NILKGVFHL	9	Unmodified	_NILKGVFHL_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|256|2|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|256|2|anti-sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|256|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5461608767509	3	347.54656	1039.61785	1.0713	0.00037233	0.17828	6.1961E-05	1.2496	0.00043429	347.54658677751496	40.593	0.46365	41.904	41.637	42.1	1.3102					36	14	3	0	0	0	0.81521	1	16963	16963		2.7352	0.23671	1	3595000			22608	7766	11220	11273	26038	26038					0.09962629956521596
NILKQGVEV	9	Unmodified	_NILKQGVEV_					0	0	0			REV__nc|ENSG00000065613|Q9H2G2-2|SLK	REV__nc|ENSG00000065613|Q9H2G2-2|SLK	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2971374392509	2	500.295299	998.576045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.427	1	41.263	40.763	41.763	1.8366								0	0	0	0.38683	1	16529	16529		10.074	0	1		+		22609	8677	11221	11274	26039	26039					0.07670029477333173
NILPPLVT	8	Unmodified	_NILPPLVT_					0	0	0			REV__tr|A0A553STS4|A0A553STS4_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05615PE=4SV=1	REV__tr|A0A553STS4|A0A553STS4_NIACIAlpha/betahydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05615PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7720519900322	2	433.770929	865.527304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.194	1	99.194	98.694	99.694	0								0	0	0	1.0178	1	41513	41513		0.69038	0	1		+		22610	15258	11222	11275	26040	26040					0.08916160908245274
NILRAQPQ	8	Unmodified	_NILRAQPQ_					0	0	0		chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2729369997978	2	470.272158	938.529764	2.3235	0.0010927	-0.25949	-0.00012203	2.064	0.00097066	470.27188631660033	74.999	0.40849	74.999	74.745	75.154	0					30	12	3	0	0	0	0.88055	1	31261	31261		8.5933	0	1	3648800			22611	226	11223	11276	26041	26041					0.058040093658974
NILRAQPQ	8	Unmodified	_NILRAQPQ_					0	0	0		chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	chr19:18435055-18435266|122|229.55|0.0|16.97|-|1|None,ISYNA1|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	470.272158	938.529764	3.6838	0.0017324	-0.31211	-0.00014678	3.3717	0.0015856	470.27190696363516	73.867	0.37636	75.185	74.998	75.374	1.318	0.057471	2.8454E-06	NaN	8.5933	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2144500			22612	226	11223	11276							0.058040093658974
NILSFIDSL	9	Unmodified	_NILSFIDSL_					0	0	0			REV__nc|ENSG00000163867|O95789-5|ZMYM6	REV__nc|ENSG00000163867|O95789-5|ZMYM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2845031619072	2	511.281857	1020.54916	3.7747	0.0019299	0.18605	9.5126E-05	3.9608	0.0020251	511.28200567217544	82.534	0.47796	83.747	83.505	83.983	1.2125					34	14	3	0	0	0	0.045797	2	34610	34610;34701		71.134	3.0529	1	6079800	+		22613	10702	11224	11277	26042;26043	26042					0.03970920866152028
NILWGGVA	8	Unmodified	_NILWGGVA_					0	0	0			REV__tr|A0A553SNK3|A0A553SNK3_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_24625PE=4SV=1	REV__tr|A0A553SNK3|A0A553SNK3_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_24625PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2325012087822	2	415.231971	828.449388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.2	1	101.2	100.7	101.7	0								0	0	0	1.0178	1	42373	42373		2.5775	0	1		+		22614	15058	11225	11278	26044	26044					0.02830148042869496
NIPETYNIL	9	Unmodified	_NIPETYNIL_					0	0	0			REV__ENST00000488991.1_1_20:10018913-10023797:+|nuORF	REV__ENST00000488991.1_1_20:10018913-10023797:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7874023318291	2	538.784764	1075.55498	1.7559	0.00094604	3.5501	0.0019127	5.3059	0.0028588	539.2876060352522	46.101	0.34596	47.476	47.271	47.617	1.3751					26	10	3	0	0	0	0.59203	1	19335	19335		11.64	0	1	1446900	+		22615	9852	11226	11279	26045	26045					0.020220193778186513
NIQHFTVFPK	10	Unmodified	_NIQHFTVFPK_					0	0	0			REV__ENST00000494860.5_1_11:112064591-112085724:+|nuORF	REV__ENST00000494860.5_1_11:112064591-112085724:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8350097537041	2	615.835123	1229.65569	1.5625	0.00096224	-1.8539	-0.0011417	-0.29136	-0.00017943	615.8339754593046	42.416	0.3757	44.337	44.133	44.509	1.9211					25	11	3	0	0	0	0.85604	1	17805	17805		6.2058	0.9089	1	3167200	+		22616	11681	11227	11280	26046	26046					0.0500509615133069
NIQLMVQNL	9	Unmodified	_NIQLMVQNL_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.2963744997978	2	536.794609	1071.57467	3.2733	0.0017571	-0.61965	-0.00033263	2.6537	0.0014245	536.7938106234966	64.496	0.49259	65.903	65.77	66.263	1.4071					25	15	2	0	0	0	0.078322	1	27030	27030		26.884	12.978	1	2480400	+		22617	9434	11228	11281	26047	26047					0.0417407211691625
NIQLMVQNL	9	Unmodified	_NIQLMVQNL_					0	0	0			REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	REV__nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	536.794609	1071.57467	2.8276	0.0015178	-1.1879	-0.00063765	1.6397	0.00088019	536.7943255569799	63.962	0.56084	65.89	65.795	66.356	1.928	-0.0063104	-0.00034433	NaN	26.884	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2736400	+		22618	9434	11228	11281							0.0417407211691625
NIQPKRGA	8	Unmodified	_NIQPKRGA_					0	0	0			REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2603027224541	2	442.259051	882.503549	2.0628	0.00091231	2.1839	0.00096584	4.2467	0.0018781	442.25955784607186	84.339	0.53132	84.339	84.058	84.589	0					40	16	3	0	0	0	0.89008	1	35161	35161		2.5775	0	1	2342100	+		22619	12085	11229	11282	26048	26048					0.05759740194423557
NIQPKRGA	8	Unmodified	_NIQPKRGA_					0	0	0			REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	REV__ENST00000222792.10_1_7:29234327-29234525:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	442.259051	882.503549	2.3593	0.0010434	1.3172	0.00058255	3.6766	0.001626	442.2598346200398	83.382	0.41035	84.57	84.294	84.704	1.1879	0.12851	-0.0004719	NaN	2.5775	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1020900	+		22620	12085	11229	11282							0.05759740194423557
NIRLRLEEY	9	Unmodified	_NIRLRLEEY_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;ENST00000476350.1_1_1:39768622-39838291:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1803466677666	3	402.559417	1204.65642	0.71308	0.00028706	-0.54586	-0.00021974	0.16722	6.7316E-05	402.55908951313256	32.515	0.14788	34.339	34.247	34.395	1.8246					7	4	2	0	0	0	0.11938	1	13621	13621		0.26902	0	1	474190			22621	2341	11230	11283	26049	26049					0.06227890800369096
NIRRARKRKY	10	Unmodified	_NIRRARKRKY_					0	0	0		ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.2870361208916	3	454.284733	1359.83237	2.2989	0.0010444	0.2479	0.00011262	2.5468	0.001157	454.2851856440088	83.58	0.55675	83.58	83.32	83.876	0					22	17	2	0	0	0	0.89803	1	34810	34810		0.77653	0.32202	1	915250			22622	3917	11231	11284	26050	26050					0.1668456982497446
NIRRARKRKY	10	Unmodified	_NIRRARKRKY_					0	0	0		ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	454.284733	1359.83237	2.9444	0.0013376	1.0032	0.00045575	3.9476	0.0017934	454.28584183382605	83.356	1.3341	83.626	83.337	84.671	0.27029	-0.034939	0.0013736	NaN	0.77653	54	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1237700			22623	3917	11231	11284							0.1668456982497446
NIRRARKRKY	10	Unmodified	_NIRRARKRKY_					0	0	0		ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	454.284733	1359.83237	3.5895	0.0016307	-0.42676	-0.00019387	3.1628	0.0014368	454.2851120060678	82.661	0.28638	83.874	83.634	83.92	1.2125	0.21281	-0.00057529	NaN	0.77653	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1004600			22624	3917	11231	11284							0.1668456982497446
NIRRARKRKY	10	Unmodified	_NIRRARKRKY_					0	0	0		ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	ENSG00000166707|ENST00000650639|ZCCHC18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	454.284733	1359.83237	4.0036	0.0018188	-1.5991	-0.00072643	2.4045	0.0010923	454.28432343872214	81.894	0.4112	83.564	83.387	83.799	1.67	-0.096731	-0.002173	NaN	0.77653	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	626600			22625	3917	11231	11284							0.1668456982497446
NISKMYDKI	9	Unmodified	_NISKMYDKI_					0	0	0			REV__nc|ENSG00000219491|Q9HAU6|TPT1P8	REV__nc|ENSG00000219491|Q9HAU6|TPT1P8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2955810427666	2	556.294442	1110.57433	2.1646	0.0012042	0.40731	0.00022658	2.5719	0.0014308	556.2947736796563	48.171	0.30621	50.149	50.022	50.328	1.9772					15	9	2	0	0	0	0.49082	1	20219	20219		15.847	4.2069	1	1225900	+		22626	14539	11232	11285	26051	26051					0.02346652397068283
NITCTDDCSFC	11	Unmodified	_NITCTDDCSFC_					0	0	0			REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.1461364626884	3	407.812208	1220.41479	-0.39503	-0.0001611	-0.96967	-0.00039544	-1.3647	-0.00055654	407.81189348602607	22.053	0.43343	22.053	21.842	22.276	0					26	13	3	0	0	0	1.0191	2	9153	9153;9203		2.6312	1.5598	1	1466600	+		22627	13192	11233	11286	26052;26053	26052					-0.1865959200472389
NITCTDDCSFC	11	Unmodified	_NITCTDDCSFC_					0	0	0			REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	408.1461364626884	3	407.812208	1220.41479	-0.39503	-0.0001611	-0.96967	-0.00039544	-1.3647	-0.00055654	407.81189348602607	22.053	0.43343	22.053	21.842	22.276	0					26	13	3	0	0	0	0.14606	1	9153	9153		2.6312	1.5598	1	1466600	+		22628	13192	11233	11286	26054	26054					-0.1865959200472389
NITCTDDCSFC	11	Unmodified	_NITCTDDCSFC_					0	0	0			REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	407.812208	1220.41479	0.83952	0.00034237	-3.3956	-0.0013848	-2.5561	-0.0010424	407.81132645455693	21.766	0.21066	21.989	21.81	22.021	0.223	-0.027741	-0.0018811	NaN	2.6312	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	306610	+		22629	13192	11233	11286							-0.1865959200472389
NITCTDDCSFC	11	Unmodified	_NITCTDDCSFC_					0	0	0			REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	REV__ENST00000461023.5_1_16:337460-337892:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	407.812208	1220.41479	0.61854	0.00025225	-3.7373	-0.0015241	-3.1187	-0.0012718	407.81156511401593	20.883	0.20646	22.009	21.866	22.072	1.1254	-0.0084683	-0.0022991	NaN	2.6312	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254560	+		22630	13192	11233	11286							-0.1865959200472389
NITLTWRQD	9	Unmodified	_NITLTWRQD_					0	0	0		nc|ENSG00000204516|Q29980-2|MICB;ENSG00000204516|ENST00000252229|MICB	nc|ENSG00000204516|Q29980-2|MICB	nc|ENSG00000204516|Q29980-2|MICB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7992431521416	2	573.798737	1145.58292	1.6534	0.00094873	-1.7882	-0.001026	-0.13473	-7.7309E-05	573.797784181548	84.319	0.31231	85.478	85.31	85.622	1.159					14	9	2	0	0	0	0.39927	1	35378	35378		20.454	0	1	3916500			22631	5145	11234	11287	26055	26055					0.015953423578821457
NIVEKLREV	9	Unmodified	_NIVEKLREV_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5;nc|ENSG00000132256|Q9C035-6|TRIM5;nc|ENSG00000132256|Q9C035-5|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2188598513603	2	550.327131	1098.63971	0.52594	0.00028944	2.5144	0.0013837	3.0403	0.0016732	550.3285643572375	30.929	0.22059	32.211	32.059	32.279	1.2825					11	6	2	0	0	0	0.1165	1	12985	12985		9.3831	2.66	1	484230			22632	2519	11235	11288	26056	26056					0.09433389914420331
NIVEKTRLPV	10	Unmodified	_NIVEKTRLPV_					0	0	0		nc|ENSG00000141441|Q9H706-2|GAREM1;nc|ENSG00000141441|Q9H706-3|GAREM1;ENSG00000141441|ENST00000269209|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	nc|ENSG00000141441|Q9H706-2|GAREM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	584.3582031130791	2	584.856055	1167.69756	2.3039	0.0013475	3.2211	0.0018839	5.525	0.0032314	584.8576715710366	75.558	0.6862	75.88	75.678	76.364	0.32163					36	21	2	0	0	0	0.1254	1	31519	31519		4.897	2.1618	1	1545100			22633	2958	11236	11289	26057	26057					0.12041651839831502
NIVENLLMI	9	Unmodified	_NIVENLLMI_					0	0	0		nc|ENSG00000163491|Q6ZWH5-4|NEK10;nc|ENSG00000163491|Q6ZWH5-2|NEK10;ENSG00000163491|ENST00000691995|NEK10;nc|ENSG00000163491|Q6ZWH5|NEK10	nc|ENSG00000163491|Q6ZWH5-4|NEK10	nc|ENSG00000163491|Q6ZWH5-4|NEK10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8003417849541	2	529.79936	1057.58417	1.9058	0.0010097	-2.482	-0.001315	-0.57621	-0.00030528	529.7995193772185	70.421	0.39976	72.259	72.041	72.441	1.8378					29	12	3	0	0	0	0.17276	1	29501	29501		36.127	1.7253	1	2932200			22634	3688	11237	11290	26058	26058					0.057678404024500196
NIVLRDRKH	9	Unmodified	_NIVLRDRKH_					0	0	0		tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8447143435478	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.85019	1	31641	31641		0.52476	0	1	9020800			22635	16979	11238	11291	26059	26059					0.10422436476960684
NIVLRDRKH	9	Unmodified	_NIVLRDRKH_					0	0	0		tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8441039919853	2	575.843813	1149.67307	1.705	0.00098179	-0.86595	-0.00049865	0.83901	0.00048314	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	0.85019	1	31697	31697		0.52476	0	1	3135100			22636	16979	11238	11291	26060	26060					0.10422436476960684
NIVLSNPKKRN	11	Unmodified	_NIVLSNPKKRN_					0	0	0		ENSG00000134463|ENST00000379215|ECHDC3	ENSG00000134463|ENST00000379215|ECHDC3	ENSG00000134463|ENST00000379215|ECHDC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8834106326103	2	641.883136	1281.75172	1.6316	0.0010473	-0.35532	-0.00022808	1.2763	0.00081925	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	1.037	1	32920	32920		1.0715	0	1	3189400			22637	2618	11239	11292	26061	26061					0.12211243991418996
NIVNQKASL	9	Unmodified	_NIVNQKASL_					0	0	0		ENST00000566611.5_1_16:57786940-57790081:+|nuORF;ENSG00000140854|ENST00000379661|KATNB1	ENST00000566611.5_1_16:57786940-57790081:+|nuORF	ENST00000566611.5_1_16:57786940-57790081:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7874633669853	2	493.785099	985.555644	2.0758	0.001025	2.2693	0.0011206	4.3451	0.0021456	493.78632380807704	40.259	0.65268	42.122	41.738	42.39	1.8624					43	20	3	0	0	0	0.49082	1	16744	16744		15.847	1.2655	1	8700800			22638	2938	11240	11293	26062	26062					0.06228858817530636
NIVPADMLL	9	Unmodified	_NIVPADMLL_					0	0	0		ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant;ATP8B3|p.G416Afs*121|1|0.53|ENSG00000130270|chr19:1800355-1800356|-/TTGCACCACTGCATTCCAGCCTGGG|frameshift_variant;ATP8B3|p.T555Kfs*30|1|0.36|ENSG00000130270|chr19:1796800-1796801|-/ACATCCT|frameshift_variant;ENST00000531925.5_1_19:1789538-1806275:-|nuORF;nc|ENSG00000130270|O60423-3|ATP8B3;ENSG00000130270|ENST00000310127|ATP8B3;nc|ENSG00000130270|O60423-1|ATP8B3	ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2736999392509	2	493.272978	984.531403	1.9445	0.00095919	-1.6473	-0.00081255	0.29728	0.00014664	493.2724041287278	83.289	0.37904	84.927	84.726	85.105	1.6379					23	11	3	0	0	0	0.079895	1	34923	34923		56.177	1.4035	1	2209900			22639	92	11241	11294	26063	26063					0.03851882339631629
NIVSTLDRK	9	Unmodified	_NIVSTLDRK_					0	0	0			REV__ENST00000474037.5_1_19:53885824-53886199:+|nuORF	REV__ENST00000474037.5_1_19:53885824-53886199:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3044311404228	2	523.303655	1044.59276	1.7919	0.00093771	-0.9425	-0.00049321	0.8494	0.0004445	523.3033827690094	70.122	2.1807	70.122	69.202	71.383	0					180	69	4	0	0	0	0.79362	1	29623	29623		3.5965	0	1	4159100	+		22640	13304	11242	11295	26064	26064					0.07224530363305348
NIWIQINV	8	Unmodified	_NIWIQINV_					0	0	0			REV__TBC1D23|p.T583I|1|0.27|ENSG00000036054|chr3:100319129-100319129|C/T|missense_variant	REV__TBC1D23|p.T583I|1|0.27|ENSG00000036054|chr3:100319129-100319129|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2889282107353	2	500.284734	998.554916	2.0492	0.0010252	-1.5056	-0.00075324	0.54354	0.00027193	500.283493935118	68.873	0.94243	69.196	68.936	69.878	0.32224					64	29	4	0	0	0	0.87106	1	28868	28868		14.582	2.0501	1	2694100	+		22641	14674	11243	11296	26065	26065					0.055580641684855436
NIWNINLQL	9	Unmodified	_NIWNINLQL_					0	0	0		nc|ENSG00000197448|Q9Y2Q3-4|GSTK1;nc|ENSG00000197448|Q9Y2Q3-3|GSTK1;ENSG00000197448|ENST00000358406|GSTK1;nc|ENSG00000197448|Q9Y2Q3-2|GSTK1;ENST00000489654.1_1_7:142960606-142961286:+|nuORF;ENST00000473649.1_1_7:142960606-142961786:+|nuORF;GSTK1|p.E115Pfs*12|1|0.08|ENSG00000197448|chr7:143265049-143265059|TGGAGAAAGCG/-|frameshift_variant	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	nc|ENSG00000197448|Q9Y2Q3-4|GSTK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3124267458916	2	564.314023	1126.61349	5.405	0.0030501	3.1153	0.001758	8.5203	0.0048081	564.3153689083813	87.966	2.0163	89.022	88.576	90.592	1.0562					141	62	3	0	0	0	0.27148	1	37020	37020		26.884	3.7352	1	6178700			22642	5008	11244	11297	26066	26066					0.05525120742936451
NIYSDSCYAF	10	Unmodified	_NIYSDSCYAF_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|42|1|sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|42|1|sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|42|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.7416259646416	2	591.742239	1181.46993	1.8813	0.0011132	-4.3093	-0.00255	-2.428	-0.0014367	591.7400694205909	83.804	0.36934	85.442	85.284	85.653	1.6379					20	11	3	0	0	0	0.82019	1	35173	35173		10.074	0.72649	1	2294500			22643	7639	11245	11298	26067	26067					-0.11355094150326295
NKAEPEQPFDK	11	Unmodified	_NKAEPEQPFDK_					0	0	0			REV__ENSG00000176177|ENST00000325157|ENTHD1	REV__ENSG00000176177|ENST00000325157|ENTHD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828613162041	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.893	1	24.544	24.044	25.044	1.6511								0	0	0	0.63775	1	9557	9557		0.40827	0	1		+		22644	11173	11246	11299	26068	26068					-0.01356727024403881
NKAKILLFHP	10	Unmodified	_NKAKILLFHP_					0	0	0			REV__tr|A0A553SMZ5|A0A553SMZ5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_23515PE=4SV=1	REV__tr|A0A553SMZ5|A0A553SMZ5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_23515PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2452880740166	3	394.244881	1179.71281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.082	1	83.082	82.582	83.582	0								0	0	0	0.66222	1	34616	34616		0.69767	0.46182	1		+		22645	15037	11247	11300	26069	26069					0.13014563427691428
NKAKILLFHP	10	Unmodified	_NKAKILLFHP_					0	0	0			REV__tr|A0A553SMZ5|A0A553SMZ5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_23515PE=4SV=1	REV__tr|A0A553SMZ5|A0A553SMZ5_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_23515PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2432128787041	3	394.244881	1179.71281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.932	1	92.932	92.432	93.432	0								0	0	0	0.66222	1	38843	38843		0.69767	0.07084	1		+		22646	15037	11247	11300	26070	26070					0.13014563427691428
NKALGVPV	8	Unmodified	_NKALGVPV_					0	0	0		tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2471496462822	2	399.247621	796.480688	1.9812	0.00079101	-2.8426	-0.0011349	-0.86136	-0.0003439	399.24638448526576	62.229	0.62243	62.558	62.29	62.912	0.32974					40	19	3	0	0	0	0.89008	2	26099	26099;26141		2.5775	0	1	10445000			22647	16618	11248	11301	26071;26072	26071					0.07430721076946156
NKALGVPV	8	Unmodified	_NKALGVPV_					0	0	0		tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	tr|A0A553SSJ3|A0A553SSJ3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03110PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2482482790947	2	399.247621	796.480688	2.5812	0.0010305	-0.29881	-0.0001193	2.2824	0.00091122	399.247729179897	61.281	1.2447	62.699	62.375	63.619	1.4177					62	39	3	0	0	0	0.89008	2	25657	25657;25703		2.5775	0	1	9607700			22648	16618	11248	11301	26073;26074	26073					0.07430721076946156
NKALIIDAL	9	Unmodified	_NKALIIDAL_					0	0	0		tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2011901736259	3	324.20257	969.585882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.409	1	39.706	39.206	40.206	1.2961								0	0	0	0.42693	1	16117	16117		1.0715	0	1				22649	17189	11249	11302	26075	26075					0.09987217482682809
NKALIIDAL	9	Unmodified	_NKALIIDAL_					0	0	0		tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	tr|A0A7D6ZXD8|A0A7D6ZXD8_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22595PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2019531130791	3	324.20257	969.585882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.669	1	39.966	39.466	40.466	1.2961								0	0	0	0.42693	1	16226	16226		1.0715	0	1				22650	17189	11249	11302	26076	26076					0.09987217482682809
NKARLKPGAKK	11	Unmodified	_NKARLKPGAKK_					0	0	0		tr|A0A7D6VQE1|A0A7D6VQE1_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_01770PE=4SV=1	tr|A0A7D6VQE1|A0A7D6VQE1_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_01770PE=4SV=1	tr|A0A7D6VQE1|A0A7D6VQE1_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_01770PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	303.1995117068291	4	303.44902	1209.76697	0.60749	0.00018434	2.2802	0.00069192	2.8877	0.00087626	303.4496587563225	32.999	1.3075	33.293	32.774	34.082	0.29431					110	44	3	0	0	0	0.14606	1	13974	13974		2.8433	1.101	1	4148500			22651	16792	11250	11303	26077	26077					0.17048155579254853
NKAVGWRV	8	Unmodified	_NKAVGWRV_					0	0	0			REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2713500857353	2	465.269419	928.524284	2.1325	0.00099217	1.0178	0.00047357	3.1503	0.0014657	465.2704424526523	94.326	0.36692	94.326	94.119	94.486	0					29	11	3	0	0	0	0.89008	1	39437	39437		2.5775	0	1	1702700	+		22652	15443	11251	11304	26078	26078					0.05716330574091444
NKAVGWRV	8	Unmodified	_NKAVGWRV_					0	0	0			REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2719604372978	2	465.269419	928.524284	3.3582	0.0015625	0.62831	0.00029233	3.9865	0.0018548	465.2700872182118	93.589	0.38578	93.734	93.524	93.91	0.14493					27	11	3	0	0	0	0.89008	2	39136	39136;39182		2.5775	0	1	1833700	+		22653	15443	11251	11304	26079;26080	26079					0.05716330574091444
NKAVGWRV	8	Unmodified	_NKAVGWRV_					0	0	0			REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2725402712822	2	465.269419	928.524284	4.3732	0.0020347	1.1831	0.00055048	5.5563	0.0025852	465.27033756012014	92.498	0.35966	93.434	93.244	93.604	0.93623					25	10	3	0	0	0	0.89008	1	38951	38951		2.5775	0	1	1382200	+		22654	15443	11251	11304	26081	26081					0.05716330574091444
NKAVPPPD	8	Unmodified	_NKAVPPPD_					0	0	0		ENST00000491987.1_1_22:35723272-35729230:+|nuORF	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	ENST00000491987.1_1_22:35723272-35729230:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	419.2274047732353	2	419.226885	836.439217	2.3257	0.00097498	-0.73199	-0.00030687	1.5937	0.00066811	419.2266728392682	72.77	0.51089	73.095	72.829	73.34	0.32494					31	15	3	0	0	0	0.89051	1	30489	30489		2.3027	0	1	1512400			22655	6917	11252	11305	26082	26082					0.014455403176043546
NKCCGAPS	8	Unmodified	_NKCCGAPS_					0	0	0		chrX:149715677-149715753|199|62.74|0.15|8.68|+|2|MAGEA11,MAGEA11|1	chrX:149715677-149715753|199|62.74|0.15|8.68|+|2|MAGEA11,MAGEA11|1	chrX:149715677-149715753|199|62.74|0.15|8.68|+|2|MAGEA11,MAGEA11|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	390.1638061404228	2	390.162373	778.310194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.091	1	52.417	51.917	52.917	0.32553								0	0	0	1.0178	1	21824	21824		2.3027	0	1				22656	303	11253	11306	26083	26083					-0.08782880908484003
NKCCPSNRD	9	Unmodified	_NKCCPSNRD_					0	0	0			REV__ENSG00000151694|ENST00000310823|ADAM17	REV__ENSG00000151694|ENST00000310823|ADAM17	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1497985720634	3	346.148142	1035.4226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62	1	62.33	61.83	62.83	0.32974								0	0	0	0.42693	1	25977	25977		0.96228	0	1		+		22657	10404	11254	11307	26084	26084					-0.09369651902284204
NKCLFLLLD	9	Unmodified	_NKCLFLLLD_					0	0	0			REV__tr|A0A7D6ZSD5|A0A7D6ZSD5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_07320PE=4SV=1	REV__tr|A0A7D6ZSD5|A0A7D6ZSD5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_07320PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2062560915947	3	360.203694	1077.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.279	1	63.697	63.197	64.197	1.4177								0	0	0	0.42693	1	26115	26115		2.2828	0	1		+		22658	15705	11255	11308	26085	26085					0.05356144265056173
NKCLPGRFV	9	Unmodified	_NKCLPGRFV_					0	0	0			REV__ENSG00000182348|ENST00000333190|ZNF804B	REV__ENSG00000182348|ENST00000333190|ZNF804B	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.1905090212822	3	345.1919	1032.55387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.242	1	82.242	81.742	82.742	0								0	0	0	0.42693	1	34261	34261		0.96228	0.18574	1		+		22659	11349	11256	11309	26086	26086					0.038895265279279556
NKCLPGRFV	9	Unmodified	_NKCLPGRFV_					0	0	0			REV__ENSG00000182348|ENST00000333190|ZNF804B	REV__ENSG00000182348|ENST00000333190|ZNF804B	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.1905700564384	3	345.1919	1032.55387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.628	1	82.628	82.128	83.128	0								0	0	0	0.42693	1	34424	34424		0.96228	0.33545	1		+		22660	11349	11256	11309	26087	26087					0.038895265279279556
NKCNYKKSI	9	Unmodified	_NKCNYKKSI_					0	0	0		tr|A0A7D6VXX9|A0A7D6VXX9_9CLOT1-deoxy-D-xylulose-5-phosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=dxsPE=3SV=1	tr|A0A7D6VXX9|A0A7D6VXX9_9CLOT1-deoxy-D-xylulose-5-phosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=dxsPE=3SV=1	tr|A0A7D6VXX9|A0A7D6VXX9_9CLOT1-deoxy-D-xylulose-5-phosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=dxsPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	366.1761352419853	3	366.530581	1096.56991	1.4517	0.0005321	2.1094	0.00077317	3.5611	0.0013053	366.5314096491071	42.647	0.15462	44.568	44.446	44.601	1.9211					7	4	2	0	0	0	0.11916	1	17830	17830		0.96228	0.33545	1	283030			22661	16992	11257	11310	26088	26088					0.025491879741593948
NKCQEHLR	8	Unmodified	_NKCQEHLR_					0	0	0			REV__tr|A0A553SJG2|A0A553SJG2_NIACIDUF72domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16725PE=4SV=1	REV__tr|A0A553SJG2|A0A553SJG2_NIACIDUF72domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16725PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2254211306572	3	343.174909	1026.5029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.887	1	61.307	60.807	61.807	1.4196								0	0	0	1.0178	1	25112	25112		1.4819	0	1		+		22662	14902	11258	11311	26089	26089					-0.009294225169469428
NKCTFTST	8	Unmodified	_NKCTFTST_					0	0	0			REV__ENST00000437633.1_7:111487110-111487161:-|nuORF	REV__ENST00000437633.1_7:111487110-111487161:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1405822634697	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.608	1	72.949	72.449	73.449	1.3415								0	0	0	1.0178	1	30054	30054		0.40072	0	1		+		22663	13061	11259	11312	26090	26090					-0.05306713659365414
NKCTLQHSD	9	Unmodified	_NKCTLQHSD_					0	0	0		ENSG00000124490|ENST00000339139|CRISP2;nc|ENSG00000124490|P16562-2|CRISP2	ENSG00000124490|ENST00000339139|CRISP2	ENSG00000124490|ENST00000339139|CRISP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.2270690798759	3	349.162557	1044.46584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.46	1	49.46	48.96	49.96	0								0	0	0	0.42693	1	20646	20646		0.96228	0	1				22664	2228	11260	11313	26091	26091					-0.0546113885336581
NKDFFERA	8	Unmodified	_NKDFFERA_					0	0	0		tr|A0A7D6ZIH4|A0A7D6ZIH4_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04205PE=4SV=1	tr|A0A7D6ZIH4|A0A7D6ZIH4_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04205PE=4SV=1	tr|A0A7D6ZIH4|A0A7D6ZIH4_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04205PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.2823364138603	3	342.838291	1025.49304	2.0853	0.00071492	0.36372	0.0001247	2.449	0.00083962	343.17388265548027	75.108	1.0058	75.433	74.77	75.776	0.32464					41	31	2	0	0	0	2.3239	1	31187	31187		0.35063	0	1	334650			22665	17100	11261	11314	26092	26092					-0.01868287250681533
NKDLIDLV	8	Unmodified	_NKDLIDLV_					0	0	0		tr|A0A553STY2|A0A553STY2_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05845PE=4SV=1	tr|A0A553STY2|A0A553STY2_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05845PE=4SV=1	tr|A0A553STY2|A0A553STY2_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05845PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2721740603447	2	465.26875	928.522947	3.5741	0.0016629	3.2965	0.0015338	6.8706	0.0031967	465.27080510438196	91.553	0.3763	92.88	92.678	93.054	1.3269					31	11	3	0	0	0	0.88055	1	38581	38581		8.5933	0	1	1582400			22666	16671	11262	11315	26093	26093					0.05582651694658125
NKDLPLVSIK	10	Unmodified	_NKDLPLVSIK_					0	0	0		ENST00000536374.1_1_9:80851152-80851524:+|nuORF;ENST00000476652.2_1_9:80851152-80881675:+|nuORF;nc|ENSG00000148019|Q5JTW2|CEP78;ENSG00000148019|ENST00000643273|CEP78;nc|ENSG00000148019|Q5JTW2-5|CEP78;nc|ENSG00000148019|Q5JTW2-2|CEP78	ENST00000536374.1_1_9:80851152-80851524:+|nuORF	ENST00000536374.1_1_9:80851152-80851524:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2328369021416	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.844	1	89.844	89.344	90.344	0								0	0	0	0.6617	1	37553	37553		1.5923	0.13716	1				22667	3194	11263	11316	26094	26094					0.11794847091255178
NKDLPLVSIK	10	Unmodified	_NKDLPLVSIK_					0	0	0		ENST00000536374.1_1_9:80851152-80851524:+|nuORF;ENST00000476652.2_1_9:80851152-80881675:+|nuORF;nc|ENSG00000148019|Q5JTW2|CEP78;ENSG00000148019|ENST00000643273|CEP78;nc|ENSG00000148019|Q5JTW2-5|CEP78;nc|ENSG00000148019|Q5JTW2-2|CEP78	ENST00000536374.1_1_9:80851152-80851524:+|nuORF	ENST00000536374.1_1_9:80851152-80851524:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2344543337822	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.314	1	90.524	90.024	91.024	0.20904								0	0	0	0.6617	1	37844	37844		1.5923	0.13716	1				22668	3194	11263	11316	26095	26095					0.11794847091255178
NKDQLYVL	8	Unmodified	_NKDQLYVL_					0	0	0			REV__ENSG00000166192|ENST00000340912|SENP8	REV__ENSG00000166192|ENST00000340912|SENP8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7757140994072	2	496.7742	991.533846	3.0114	0.001496	-0.32459	-0.00016125	2.6868	0.0013347	496.7743590716678	70.567	0.41672	71.921	71.744	72.161	1.3536					33	12	3	0	0	0	0.82039	1	29646	29646		19.439	0	1	6049500	+		22669	10814	11264	11317	26096	26096					0.037740540689469526
NKDTKRWWF	9	Unmodified	_NKDTKRWWF_					0	0	0			REV__ENST00000569190.1_1_16:19536989-19537178:+|nuORF	REV__ENST00000569190.1_1_16:19536989-19537178:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	320.2071411013603	4	320.918824	1279.64619	1.6245	0.00052135	-0.58217	-0.00018683	1.0424	0.00033452	321.169064341804	73.398	0.43533	73.723	73.605	74.04	0.32494					18	13	2	0	0	0	0.11955	1	30837	30837		0.23584	0	1	281280	+		22670	12843	11265	11318	26097	26097					0.017553278657942428
NKECEDVDI	9	Unmodified	_NKECEDVDI_					0	0	0			REV__ENSG00000166147|ENST00000316623|FBN1	REV__ENSG00000166147|ENST00000316623|FBN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	356.2796508669853	3	355.49034	1063.44919	1.0044	0.00035705	-2.1269	-0.00075609	-1.1225	-0.00039904	355.8235044947617	71.241	0.15651	73.065	72.941	73.098	1.824					6	4	2	0	0	0	0.11908	1	29882	29882		0.23584	0.028987	1	161190	+		22671	10813	11266	11319	26098	26098					-0.07999684529977458
NKEDCVEIY	9	Unmodified	_NKEDCVEIY_					0	0	0		ENST00000479657.5_1_1:169673230-169677729:-|nuORF;ENSG00000188404|ENST00000236147|SELL;ENST00000463108.5_1_1:169670695-169680678:-|nuORF;nc|ENSG00000188404|P14151-2|SELL	ENST00000479657.5_1_1:169673230-169677729:-|nuORF	ENST00000479657.5_1_1:169673230-169677729:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1012756228447	3	371.502468	1111.48558	1.226	0.00045545	1.6561	0.00061526	2.8821	0.0010707	371.50345892249203	54.018	0.21888	55.986	55.877	56.096	1.9684					8	6	2	0	0	0	0.11941	1	22671	22671		1.0715	0.67075	1	801770			22672	4861	11267	11320	26099	26099					-0.06570807633261211
NKEFEEKYRVR	11	Unmodified	_NKEFEEKYRVR_					0	0	0			REV__nc|ENSG00000002834|Q14847-3|LASP1	REV__nc|ENSG00000002834|Q14847-3|LASP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	749.3960449099541	2	749.394064	1496.77358	2.7268	0.0020435	-2.7987	-0.0020973	-0.071901	-5.3882E-05	749.394639834403	108.48	0.17579	108.53	108.42	108.6	0.050644					61	10	7	0	0	0	1.0396	1	46625	46625		0.26902	0.26902	1	120440000	+		22673	14376	11268	11321	26100	26100					0.04506003949313708
NKEGQDIEM	9	Unmodified	_NKEGQDIEM_					0	0	0			REV__ENST00000539659.5_1_12:14576849-14613468:+|nuORF	REV__ENST00000539659.5_1_12:14576849-14613468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0701476931572	3	355.162335	1062.46517	2.5055	0.00088985	2.1164	0.00075167	4.6219	0.0016415	355.1628861683452	63.791	0.24448	65.719	65.551	65.795	1.928					13	7	2	0	0	0	0.11941	1	26723	26723		1.0715	0.61312	1	732340	+		22674	11039	11269	11322	26101	26101					-0.0635597829307244
NKEKCPPSA	9	Unmodified	_NKEKCPPSA_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1631652712822	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.606	1	85.606	85.106	86.106	0								0	0	0	0.42693	1	35668	35668		0.96228	0	1				22675	3303	11270	11323	26102	26102					-0.017470493596533743
NKEKCPPSA	9	Unmodified	_NKEKCPPSA_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1624938845634	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.738	1	85.738	85.238	86.238	0								0	0	0	0.42693	1	35723	35723		0.96228	0	1				22676	3303	11270	11323	26103	26103					-0.017470493596533743
NKEKCPPSA	9	Unmodified	_NKEKCPPSA_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1634094119072	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.786	1	85.046	84.546	85.546	0.26083								0	0	0	0.42693	1	35454	35454		0.96228	0	1				22677	3303	11270	11323	26104	26104					-0.017470493596533743
NKEKCPPSA	9	Unmodified	_NKEKCPPSA_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1638976931572	3	325.163898	972.469866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.493	1	87.727	87.227	88.227	0.23471								0	0	0	0.42693	1	36686	36686		0.96228	0	1				22678	3303	11270	11323	26105	26105					-0.017470493596533743
NKEPAKKKRKK	11	Unmodified	_NKEPAKKKRKK_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.2279846072197	4	339.471489	1353.85685	0.90643	0.00030771	-1.8814	-0.00063867	-0.97492	-0.00033096	339.47105853315026	69.282	0.40746	69.604	69.407	69.815	0.32224					13	12	2	0	0	0	0.14606	1	28934	28934		0.08335	0	1	349370			22679	2922	11271	11324	26106	26106					0.19407785187809168
NKERKKKIRRA	11	Unmodified	_NKERKKKIRRA_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|5|1|sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|5|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	358.1476318240166	4	357.482389	1425.90045	2.4653	0.00088132	-1.9667	-0.00070307	0.49863	0.00017825	357.48213043436266	60.876	0.18314	62.842	62.729	62.912	1.9653					6	5	2	0	0	0	0.14606	1	25564	25564		0.40827	0.31342	1	293740	+		22680	14332	11272	11325	26107	26107					0.20453394684977866
NKERYAAEA	9	Unmodified	_NKERYAAEA_					0	0	0			REV__ENSG00000091010|ENST00000646991|POU4F3	REV__ENSG00000091010|ENST00000646991|POU4F3	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1786071658134	3	351.177084	1050.50942	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.99	1	85.251	84.751	85.751	0.26083								0	0	0	0.42693	1	35538	35538		0.96228	0.33545	1		+		22681	8898	11273	11326	26108	26108					-0.013812060845793894
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.1793395876884	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.163	1	82.163	81.663	82.663	0								0	0	0	0.42693	1	34227	34227		0.86438	0.23755	1		+		22682	15548	11274	11327	26109	26109					-0.01044279302209361
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.1781494021416	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.17	1	91.17	90.67	91.67	0								0	0	0	0.42693	1	38103	38103		0.86438	0	1		+		22683	15548	11274	11327	26110	26110					-0.01044279302209361
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1797973513603	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.435	1	82.716	82.216	83.216	0.2802								0	0	0	0.42693	1	34471	34471		0.86438	0	1		+		22684	15548	11274	11327	26111	26111					-0.01044279302209361
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1801940798759	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.48	1	84.741	84.241	85.241	0.26083								0	0	0	0.42693	1	35330	35330		0.86438	0	1		+		22685	15548	11274	11327	26112	26112					-0.01044279302209361
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1791564822197	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.695	1	85.947	85.447	86.447	0.25227								0	0	0	0.42693	1	35833	35833		0.86438	0.46366	1		+		22686	15548	11274	11327	26113	26113					-0.01044279302209361
NKESNKKTC	9	Unmodified	_NKESNKKTC_					0	0	0			REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	REV__tr|A0A7D6VX92|A0A7D6VX92_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1797668337822	3	351.178207	1050.51279	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.747	1	89.971	89.471	90.471	0.22359								0	0	0	0.42693	1	37612	37612		0.86438	0.40604	1		+		22687	15548	11274	11327	26114	26114					-0.01044279302209361
NKESTDEKIKR	11	Unmodified	_NKESTDEKIKR_					0	0	0			REV__ENST00000306107.9_3_3:105085858-105238971:+|nuORF	REV__ENST00000306107.9_3_3:105085858-105238971:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9132873415947	3	449.912407	1346.71539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.624	1	56.945	56.445	57.445	0.32103								0	0	0	0.63775	1	23740	23740		0.45452	0	1		+		22688	12337	11275	11328	26115	26115					0.05590322304010442
NKETKKYLI	9	Unmodified	_NKETKKYLI_					0	0	0			REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8414794802666	2	568.837331	1135.66011	2.9471	0.0016764	3.1993	0.0018199	6.1464	0.0034963	568.8388014048255	70.922	0.83921	72.264	71.732	72.571	1.3415					67	26	3	0	0	0	0.045797	1	29736	29736		71.134	0	1	7533400	+		22689	15853	11276	11329	26116	26116					0.09770560574224874
NKETLYKGTF	10	Unmodified	_NKETLYKGTF_					0	0	0			REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8204223513603	2	600.816596	1199.61864	3.8388	0.0023064	4.0363	0.0024251	7.8751	0.0047315	600.8182320850217	82.374	0.41142	83.586	83.255	83.666	1.2125					19	12	2	0	0	0	0.78468	1	34525	34525		13.906	2.2658	1	1270000	+		22690	14679	11277	11330	26117	26117					0.02681379814907814
NKETLYKGTF	10	Unmodified	_NKETLYKGTF_					0	0	0			REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	600.816596	1199.61864	3.8388	0.0023064	4.0363	0.0024251	7.8751	0.0047315	600.8182320850217	82.374	0.41142	83.586	83.255	83.666	1.2125	-0.0028593	0.00050029	NaN	13.906	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1270000	+		22691	14679	11277	11330							0.02681379814907814
NKETLYKGTF	10	Unmodified	_NKETLYKGTF_					0	0	0			REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	REV__Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|19|1|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	600.816596	1199.61864	3.9034	0.0023452	3.2864	0.0019745	7.1898	0.0043198	600.8179300162474	81.922	0.43989	83.592	83.295	83.734	1.67	0.0028593	-0.00040077	NaN	13.906	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1006600	+		22692	14679	11277	11330							0.02681379814907814
NKEVLPKLQV	10	Unmodified	_NKEVLPKLQV_					0	0	0			REV__nc|ENSG00000152969|Q96N16-6|JAKMIP1	REV__nc|ENSG00000152969|Q96N16-6|JAKMIP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3566772341728	2	584.358431	1166.70231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.311	1	73.636	73.136	74.136	0.32494								0	0	0	0.66185	1	30671	30671		1.3295	0	1		+		22693	10437	11278	11331	26118	26118					0.12562535982578993
NKFCSARDSE	10	Unmodified	_NKFCSARDSE_					0	0	0		MBD4|p.K340R|1|0.34|ENSG00000129071|chr3:129436625-129436625|T/C|missense_variant	MBD4|p.K340R|1|0.34|ENSG00000129071|chr3:129436625-129436625|T/C|missense_variant	MBD4|p.K340R|1|0.34|ENSG00000129071|chr3:129436625-129436625|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	578.7581664919853	2	578.756212	1155.49787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.595	1	12.685	12.185	13.185	0.089381								0	0	0	0.65975	1	5228	5228		4.897	0	1				22694	7791	11279	11332	26119	26119					-0.07365771170225344
NKFEMCQH	8	Unmodified	_NKFEMCQH_					0	0	0			REV__ENST00000372134.5_1_10:85910584-85912027:+|nuORF	REV__ENST00000372134.5_1_10:85910584-85912027:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.1497680544853	3	346.149483	1035.42662	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.536	1	58.536	58.036	59.036	0								0	0	0	1.0178	1	24415	24415		1.6526	0	1		+		22695	12679	11280	11333	26120	26120					-0.08967562408565755
NKFGVILHG	9	Unmodified	_NKFGVILHG_					0	0	0			REV__tr|A0A7D6VPT6|A0A7D6VPT6_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00250PE=3SV=1	REV__tr|A0A7D6VPT6|A0A7D6VPT6_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00250PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.0049316287041	3	328.859027	983.55525	0.05916	1.9455E-05	0.7586	0.00024947	0.81776	0.00026893	328.85941474819083	23.681	0.43123	24.905	24.757	25.188	1.2233					15	13	2	0	0	0	0.11941	1	9921	9921		1.0715	0.61312	1	208630	+		22696	15364	11281	11334	26121	26121					0.06281483888324146
NKFGVILHG	9	Unmodified	_NKFGVILHG_					0	0	0			REV__tr|A0A7D6VPT6|A0A7D6VPT6_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00250PE=3SV=1	REV__tr|A0A7D6VPT6|A0A7D6VPT6_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00250PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.3237487673759	3	328.859027	983.55525	-0.032313	-1.0627E-05	1.6475	0.0005418	1.6152	0.00053117	328.8595443550625	23.215	0.30671	24.866	24.716	25.023	1.6511					15	9	2	0	0	0	0.11941	1	9708	9708		1.0715	0.61312	1	294860	+		22697	15364	11281	11334	26122	26122					0.06281483888324146
NKFKHIVID	9	Unmodified	_NKFKHIVID_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1012756228447	3	371.885353	1112.63423	0.82522	0.00030689	2.0805	0.00077371	2.9057	0.0010806	372.22076422731914	46.503	0.1215	47.878	47.803	47.925	1.3751					5	3	2	0	0	0	0.11941	1	19456	19456		1.0715	0.67075	1	161530			22698	17231	11282	11335	26123	26123					0.08241711122605011
NKFKKIHF	8	Unmodified	_NKFKKIHF_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.2716552615166	2	531.316369	1060.61818	1.5353	0.00081572	4.3868	0.0023308	5.9221	0.0031465	531.3181386680162	77.305	0.44312	79.057	78.818	79.261	1.7514					21	13	2	0	0	0	2.3239	1	32451	32451		2.5775	0	1	1035600	+		22699	10465	11283	11336	26124	26124					0.09030049676357521
NKFKKIHF	8	Unmodified	_NKFKKIHF_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	531.316369	1060.61818	1.8012	0.00095702	6.018	0.0031975	7.8192	0.0041545	531.319555841626	78.625	0.49802	78.625	78.409	78.907	0	-0.23137	0.00033029	NaN	2.5775	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1240900	+		22700	10465	11283	11336							0.09030049676357521
NKFKKIHF	8	Unmodified	_NKFKKIHF_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.316369	1060.61818	1.8584	0.00098738	6.4047	0.0034029	8.263	0.0043903	531.3197778899633	78.481	0.56271	78.79	78.516	79.078	0.30933	-0.066375	0.00074118	NaN	2.5775	39	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1305300	+		22701	10465	11283	11336							0.09030049676357521
NKFKKIHF	8	Unmodified	_NKFKKIHF_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	531.316369	1060.61818	2.5037	0.0013303	4.4993	0.0023906	7.003	0.0037208	531.3183419083657	77.673	0.50604	78.954	78.631	79.137	1.2809	0.097534	-0.0012835	NaN	2.5775	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1220400	+		22702	10465	11283	11336							0.09030049676357521
NKFLCQQK	8	Unmodified	_NKFLCQQK_					0	0	0			REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	REV__ENST00000552253.1_1_12:70986014-71031175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.8467590212822	3	336.848022	1007.52224	-1.0659	-0.00035905	-3.3253	-0.0011201	-4.3912	-0.0014792	336.8469639530035	15.297	0.31195	16.123	15.981	16.293	0.82643					23	9	3	0	0	0	0.87106	1	6338	6338		10.824	0	1	1697000	+		22703	9712	11284	11337	26125	26125					0.018775337739725728
NKFLVFKKK	9	Unmodified	_NKFLVFKKK_					0	0	0		nc|ENSG00000147912|Q9UK96-2|FBXO10;ENST00000541804.1_1_9:37512546-37588833:-|nuORF;ENSG00000147912|ENST00000432825|FBXO10;ENST00000276960.7_1_9:37515899-37521812:-|nuORF	nc|ENSG00000147912|Q9UK96-2|FBXO10	nc|ENSG00000147912|Q9UK96-2|FBXO10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1530334353447	3	384.581493	1150.72265	0.62499	0.00024036	0.90549	0.00034823	1.5305	0.0005886	384.91620270362966	31.177	0.49292	33.002	32.865	33.358	1.8246					24	16	2	0	0	0	0.11955	1	13096	13096		0.23584	0	1	1432300			22704	3193	11285	11338	26126	26126					0.15331751433086538
NKFVKAIKL	9	Unmodified	_NKFVKAIKL_					0	0	0			REV__CON__P00766	REV__CON__P00766	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0701476931572	3	354.234093	1059.68045	-1.204	-0.0004265	-2.1182	-0.00075034	-3.3222	-0.0011768	354.23293236858376	68.388	0.21991	68.388	68.233	68.453	0					8	6	2	0	0	0	0.11948	1	28493	28493		0.23584	0	1	295610	+	+	22705	8376	11286	11339	26127	26127					0.15299776024676248
NKFYQIYTEP	10	Unmodified	_NKFYQIYTEP_					0	0	0			REV__ENSG00000218305|ENST00000650262|CDC14C	REV__ENSG00000218305|ENST00000650262|CDC14C	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8838683962822	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.531	1	45.86	45.36	46.36	0.32899								0	0	0	0.66227	1	19114	19114		0.62683	0.17231	1		+		22706	8816	11287	11340	26128	26128					-0.009546375306626942
NKGAKAAK	8	Unmodified	_NKGAKAAK_					0	0	0			REV__nc|ENSG00000072571|O75330-4|HMMR	REV__nc|ENSG00000072571|O75330-4|HMMR	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2439147830009	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.898	1	66.222	65.722	66.722	0.32449								0	0	0	1.0178	1	27591	27591		0.69038	0	1		+		22707	8739	11288	11341	26129	26129					0.06940952791410382
NKGDPVPT	8	Unmodified	_NKGDPVPT_					0	0	0			REV__ENSG00000123066|ENST00000281928|MED13L	REV__ENSG00000123066|ENST00000281928|MED13L	MSMS	GG20161007_CRH_Patient100_A02_02	2	414.2183410525322	2	414.216517	826.418482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.791	1	94.914	94.414	95.414	0.12331								0	0	0	1.0178	1	39668	39668		2.0598	1.2661	1		+		22708	9614	11289	11342	26130	26130					-0.0016705006204347228
NKGGKDKH	8	Unmodified	_NKGGKDKH_					0	0	0		ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.2417785525322	2	442.240858	882.467164	2.83	0.0012516	0.52886	0.00023389	3.3589	0.0014854	442.2409968616687	75.445	0.58263	76.752	76.404	76.987	1.3063					43	18	3	0	0	0	0.89051	1	31598	31598		2.3027	1.6124	1	11008000			22709	5844	11290	11343	26131	26131					0.021228632976999506
NKGGKDKH	8	Unmodified	_NKGGKDKH_					0	0	0		ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	ENST00000320560.12_1_12:45725150-45740856:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.2424194216728	2	442.240858	882.467164	2.8569	0.0012634	0.38863	0.00017187	3.2455	0.0014353	442.24083739466107	75.159	0.52798	76.941	76.668	77.196	1.7817					42	16	4	0	0	0	0.89051	1	31608	31608		2.3027	1.5091	1	9532700			22710	5844	11290	11343	26132	26132					0.021228632976999506
NKGIAPAA	8	Unmodified	_NKGIAPAA_					0	0	0			REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1020995974541	2	371.216321	740.418088	0.065359	2.4262E-05	-2.734	-0.0010149	-2.6686	-0.00099064	371.2152672227945	88.961	0.38417	88.961	88.762	89.146	0					13	11	2	0	0	0	2.3239	1	37248	37248		0.69038	0	1	289100	+		22711	13168	11291	11344	26133	26133					0.03749575008737338
NKGIAPAA	8	Unmodified	_NKGIAPAA_					0	0	0			REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1017333865166	2	371.216321	740.418088	-0.27868	-0.00010345	-1.9102	-0.00070911	-2.1889	-0.00081256	371.2154222006641	63.001	0.37543	63.001	62.832	63.208	0					28	11	3	0	0	0	2.3239	1	26323	26323		0	0	1	4889300	+		22712	13168	11291	11344	26134	26134					0.03749575008737338
NKGIAPAA	8	Unmodified	_NKGIAPAA_					0	0	0			REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	371.216321	740.418088	2.4469	0.00090831	-4.5318	-0.0016823	-2.0849	-0.00077396	371.21450738226247	88.797	0.35561	89.021	88.778	89.133	0.22359	0.029868	-0.00023301	NaN	0.69038	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	529400	+		22713	13168	11291	11344							0.03749575008737338
NKGIAPAA	8	Unmodified	_NKGIAPAA_					0	0	0			REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	371.216321	740.418088	1.7295	0.00064202	-4.2427	-0.0015749	-2.5132	-0.00093292	371.21461729171125	63.003	0.40627	63.332	63.067	63.473	0.32974	0.05663	-0.00055453	NaN	0	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6065300	+		22714	13168	11291	11344							0.03749575008737338
NKGIAPAA	8	Unmodified	_NKGIAPAA_					0	0	0			REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	REV__ENST00000457313.5_1_2:219602685-219603048:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	371.216321	740.418088	1.9126	0.00070999	-4.3027	-0.0015972	-2.3901	-0.00088723	371.21454138732577	62.076	0.44549	63.494	63.238	63.683	1.4177	0.21812	-0.00059909	NaN	0	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4878400	+		22715	13168	11291	11344							0.03749575008737338
NKGILNKFMI	10	Unmodified	_NKGILNKFMI_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2306396365166	3	393.230243	1176.6689	0.35961	0.00014141	-0.2588	-0.00010177	0.1008	3.9639E-05	393.2294137506669	91.832	0.75817	91.832	91.5	92.258	0					35	23	3	0	0	0	0.89803	1	38348	38348		0.69767	0	1	1178300	+		22716	10387	11292	11345	26135	26135					0.08763210939059718
NKGKGINI	8	Unmodified	_NKGKGINI_					0	0	0		tr|A0A7D6W023|A0A7D6W023_9CLOTLipoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22275PE=4SV=1	tr|A0A7D6W023|A0A7D6W023_9CLOTLipoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22275PE=4SV=1	tr|A0A7D6W023|A0A7D6W023_9CLOTLipoproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22275PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2563049197197	2	422.255977	842.497401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.768	1	92.937	92.437	93.437	0.16835								0	0	0	1.0178	1	38847	38847		2.3027	0	1				22717	17007	11293	11346	26136	26136					0.06985221962884225
NKGKLYEIDDD	11	Unmodified	_NKGKLYEIDDD_					0	0	0			REV__tr|A0A7D6VVR5|A0A7D6VVR5_9CLOTNicotinatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06060PE=3SV=1	REV__tr|A0A7D6VVR5|A0A7D6VVR5_9CLOTNicotinatephosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06060PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	328.2015869021416	4	328.162217	1308.61976	0.1968	6.4582E-05	-0.18672	-6.1274E-05	0.010081	3.3081E-06	328.4136568454949	35.706	0.44486	37.523	37.354	37.798	1.8176					36	27	2	0	0	0	0.14606	1	14942	14942		1.2148	0	1	2361000	+		22718	15535	11294	11347	26137	26137					-0.02220450606864688
NKGLGRGPV	9	Unmodified	_NKGLGRGPV_					0	0	0			REV__TFIP11|p.T396Hfs*18|1|0.05|ENSG00000100109|chr22:26499248-26499249|-/C|frameshift_variant	REV__TFIP11|p.T396Hfs*18|1|0.05|ENSG00000100109|chr22:26499248-26499249|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	449.2676574587822	2	449.266876	896.519199	1.6238	0.00072951	0.1852	8.3203E-05	1.809	0.00081272	449.2669508801014	73.169	1.0505	73.169	72.684	73.734	0					80	33	3	0	0	0	0.83753	1	30441	30441		1.8442	1.0506	1	2611200	+		22719	8967	11295	11348	26138	26138					0.06680026711467235
NKGQIAIR	8	Unmodified	_NKGQIAIR_					0	0	0			REV__tr|A0A7D6VLQ0|A0A7D6VLQ0_9CLOTLsafamilyABC-FtyperibosomalprotectionproteinOS=ClostridiumintestinaleOX=36845GN=lsaPE=4SV=1	REV__tr|A0A7D6VLQ0|A0A7D6VLQ0_9CLOTLsafamilyABC-FtyperibosomalprotectionproteinOS=ClostridiumintestinaleOX=36845GN=lsaPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2756225466728	2	450.274701	898.534849	2.842	0.0012797	-0.54925	-0.00024732	2.2928	0.0010324	450.27427004922237	76.175	1.3392	76.496	75.925	77.264	0.32163					108	42	5	0	0	0	0.89178	1	31772	31772		0.69038	0	1	239710000	+		22720	15309	11296	11349	26139	26139					0.08152313228492858
NKGRRRAQR	9	Unmodified	_NKGRRRAQR_					0	0	0			REV__ENSG00000005108|ENST00000423059|THSD7A	REV__ENSG00000005108|ENST00000423059|THSD7A	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.2305480837822	3	381.230628	1140.67005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.154	1	70.024	69.524	70.524	1.87								0	0	0	0.42693	1	28596	28596		1.0715	0.83562	1		+		22721	8493	11297	11350	26140	26140					0.10534606142823577
NKGTKPIN	8	Unmodified	_NKGTKPIN_					0	0	0			REV__tr|A0A7D6VRP9|A0A7D6VRP9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01610PE=4SV=1	REV__tr|A0A7D6VRP9|A0A7D6VRP9_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01610PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	436.2543823122978	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.705	1	97.961	97.461	98.461	0.25636								0	0	0	1.0178	1	41106	41106		4.756	0	1		+		22722	15419	11298	11351	26141	26141					0.05188918100270712
NKHDDFTI	8	Unmodified	_NKHDDFTI_					0	0	0			REV__FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant	REV__FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	330.4929382205009	3	330.494413	988.461409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.21	1	100.21	99.707	100.71	0								0	0	0	1.0178	1	41948	41948		1.4819	0.28856	1		+		22723	9971	11299	11352	26142	26142					-0.03328280004620865
NKHKIERTL	9	Unmodified	_NKHKIERTL_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2289306521416	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.929	1	80.23	79.73	80.73	0.30047								0	0	0	0.42693	1	33415	33415		2.2828	1.3205	1		+		22724	10894	11300	11353	26143	26143					0.09851614382841944
NKHKIERTL	9	Unmodified	_NKHKIERTL_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2280761599541	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.17	1	84.43	83.93	84.93	0.26083								0	0	0	0.42693	1	35205	35205		2.2828	1.2113	1		+		22725	10894	11300	11353	26144	26144					0.09851614382841944
NKHKIERTL	9	Unmodified	_NKHKIERTL_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278320193291	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.915	1	85.176	84.676	85.676	0.26083								0	0	0	0.42693	1	35508	35508		2.2828	1.3205	1		+		22726	10894	11300	11353	26145	26145					0.09851614382841944
NKHKIILE	8	Unmodified	_NKHKIILE_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2068969607353	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.483	1	81.763	81.263	82.263	0.2802								0	0	0	1.0178	1	34068	34068		0.40072	0	1		+		22727	11110	11301	11354	26146	26146					0.10006039576865078
NKHKIILE	8	Unmodified	_NKHKIILE_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	332.2079955935478	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.194	1	89.641	89.141	90.141	1.4467								0	0	0	1.0178	1	37171	37171		0.40072	0	1		+		22728	11110	11301	11354	26147	26147					0.10006039576865078
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2281982302666	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.947	1	84.947	84.447	85.447	0								0	0	0	0.42693	1	35396	35396		0.96228	0	1				22729	16838	11302	11355	26148	26148					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2277709841728	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.264	1	85.264	84.764	85.764	0								0	0	0	0.42693	1	35525	35525		0.96228	0.0979	1				22730	16838	11302	11355	26149	26149					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2285339236259	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.544	1	85.544	85.044	86.044	0								0	0	0	0.42693	1	35642	35642		0.96228	0	1				22731	16838	11302	11355	26150	26150					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2283508181572	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.741	1	85.741	85.241	86.241	0								0	0	0	0.42693	1	35724	35724		0.96228	0	1				22732	16838	11302	11355	26151	26151					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2285644412041	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.611	1	86.611	86.111	87.111	0								0	0	0	0.42693	1	36095	36095		0.96228	0	1				22733	16838	11302	11355	26152	26152					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2268249392509	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.781	1	86.781	86.281	87.281	0								0	0	0	0.42693	1	36179	36179		0.96228	0	1				22734	16838	11302	11355	26153	26153					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2275268435478	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.343	1	87.343	86.843	87.843	0								0	0	0	0.42693	1	36491	36491		0.96228	0.0979	1				22735	16838	11302	11355	26154	26154					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2288390994072	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.872	1	87.872	87.372	88.372	0								0	0	0	0.42693	1	36730	36730		0.96228	0	1				22736	16838	11302	11355	26155	26155					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278930544853	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.792	1	77.108	76.608	77.608	0.31653								0	0	0	0.42693	1	32116	32116		0.96228	0	1				22737	16838	11302	11355	26156	26156					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2282287478447	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.561	1	78.87	78.37	79.37	0.30933								0	0	0	0.42693	1	32844	32844		0.96228	0	1				22738	16838	11302	11355	26157	26157					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2289611697197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.083	1	80.383	79.883	80.883	0.30047								0	0	0	0.42693	1	33478	33478		0.96228	0	1				22739	16838	11302	11355	26158	26158					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2278320193291	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.235	1	80.532	80.032	81.032	0.29665								0	0	0	0.42693	1	33542	33542		0.96228	0	1				22740	16838	11302	11355	26159	26159					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2289611697197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.103	1	83.373	82.873	83.873	0.27029								0	0	0	0.42693	1	34755	34755		0.96228	0	1				22741	16838	11302	11355	26160	26160					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2280456423759	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.656	1	83.926	83.426	84.426	0.27029								0	0	0	0.42693	1	34987	34987		0.96228	0	1				22742	16838	11302	11355	26161	26161					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2282897830009	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.625	1	84.885	84.385	85.385	0.26083								0	0	0	0.42693	1	35389	35389		0.96228	0	1				22743	16838	11302	11355	26162	26162					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2283203005791	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.754	1	85.015	84.515	85.515	0.26083								0	0	0	0.42693	1	35442	35442		0.96228	0	1				22744	16838	11302	11355	26163	26163					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2285339236259	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.573	1	85.826	85.326	86.326	0.25227								0	0	0	0.42693	1	35782	35782		0.96228	0	1				22745	16838	11302	11355	26164	26164					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281371951103	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.757	1	86.01	85.51	86.51	0.25227								0	0	0	0.42693	1	35859	35859		0.96228	0	1				22746	16838	11302	11355	26165	26165					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2281982302666	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.006	1	86.258	85.758	86.758	0.25227								0	0	0	0.42693	1	35965	35965		0.96228	0	1				22747	16838	11302	11355	26166	26166					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2273742556572	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.475	1	86.719	86.219	87.219	0.24387								0	0	0	0.42693	1	36169	36169		0.96228	0	1				22748	16838	11302	11355	26167	26167					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2292053103447	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.324	1	89.38	88.88	89.88	1.0562								0	0	0	0.42693	1	37241	37241		0.96228	0	1				22749	16838	11302	11355	26168	26168					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2291137576103	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.483	1	89.539	89.039	90.039	1.0562								0	0	0	0.42693	1	37305	37305		0.96228	0	1				22750	16838	11302	11355	26169	26169					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2277404665947	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.728	1	89.784	89.284	90.284	1.0562								0	0	0	0.42693	1	37404	37404		0.96228	0	1				22751	16838	11302	11355	26170	26170					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2267028689384	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.932	1	74.742	74.242	75.242	1.8101								0	0	0	0.42693	1	30596	30596		0.96228	0	1				22752	16838	11302	11355	26171	26171					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2284728884697	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.795	1	81.512	81.012	82.012	1.7167								0	0	0	0.42693	1	33468	33468		2.4985	0	1				22753	16838	11302	11355	26172	26172					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2278930544853	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.611	1	85.249	84.749	85.749	1.6379								0	0	0	0.42693	1	35070	35070		0.96228	0	1				22754	16838	11302	11355	26173	26173					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2289611697197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.986	1	85.624	85.124	86.124	1.6379								0	0	0	0.42693	1	35224	35224		0.96228	0	1				22755	16838	11302	11355	26174	26174					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2273437380791	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.239	1	85.836	85.336	86.336	1.5962								0	0	0	0.42693	1	35330	35330		0.96228	0	1				22756	16838	11302	11355	26175	26175					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2280456423759	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.841	1	86.437	85.937	86.937	1.5962								0	0	0	0.42693	1	35586	35586		0.96228	0	1				22757	16838	11302	11355	26176	26176					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2298156619072	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.524	1	89.019	88.519	89.519	1.4953								0	0	0	0.42693	1	36898	36898		0.96228	0	1				22758	16838	11302	11355	26177	26177					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2296020388603	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.871	1	89.317	88.817	89.817	1.4467								0	0	0	0.42693	1	37040	37040		1.0715	0	1				22759	16838	11302	11355	26178	26178					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2290832400322	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.358	1	89.805	89.305	90.305	1.4467								0	0	0	0.42693	1	37239	37239		0.96228	0	1				22760	16838	11302	11355	26179	26179					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2299377322197	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.478	1	89.925	89.425	90.425	1.4467								0	0	0	0.42693	1	37288	37288		0.96228	0	1				22761	16838	11302	11355	26180	26180					0.09851614382841944
NKHRKITLE	9	Unmodified	_NKHRKITLE_					0	0	0		tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	tr|A0A7D6VRQ4|A0A7D6VRQ4_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2283813357353	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.603	1	90.05	89.55	90.55	1.4467								0	0	0	0.42693	1	37338	37338		2.4985	0	1				22762	16838	11302	11355	26181	26181					0.09851614382841944
NKHRLSRLL	9	Unmodified	_NKHRLSRLL_					0	0	0			REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.5721008181572	3	379.57188	1135.69381	0.37477	0.00014225	0.86784	0.00032941	1.2426	0.00047166	379.5721766579097	88.385	0.51817	88.385	88.15	88.668	0					50	16	5	0	0	0	0.81521	1	36899	36899		2.7352	0	1	17017000	+		22763	8119	11303	11356	26182	26182					0.1313902685665198
NKHRLSRLL	9	Unmodified	_NKHRLSRLL_					0	0	0			REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.5735656619072	3	379.57188	1135.69381	3.836	0.001456	0.7371	0.00027978	4.5731	0.0017358	379.5721175213272	87.504	0.74989	88.596	88.366	89.116	1.0918					46	23	2	0	0	0	0.81521	2	36920	36871;36920		2.7352	0.64919	1	9859200	+		22764	8119	11303	11356	26183;26184	26184					0.1313902685665198
NKHRLSRLL	9	Unmodified	_NKHRLSRLL_					0	0	0			REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	REV__AluSz6_dup6994|chr2:202346375-202346538:-|1.0201547975602998|0.0044314161339126|7.85|425.0|6|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	380.2293884158134	3	379.57188	1135.69381	4.8367	0.0018359	-1.1	-0.00041755	3.7367	0.0014183	379.5711062944456	89.026	0.19354	90.082	90.014	90.207	1.0562					6	5	2	0	0	0	0.11944	1	37566	37566		0.96228	0.69326	1	161520	+		22765	8119	11303	11356	26185	26185					0.1313902685665198
NKHRRIRRQ	9	Unmodified	_NKHRRIRRQ_					0	0	0			REV__ENST00000492830.5_1_16:56419897-56437006:-|nuORF	REV__ENST00000492830.5_1_16:56419897-56437006:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	421.2185241580009	3	421.925427	1262.75445	2.9488	0.0012442	0.95355	0.00040233	3.9024	0.0016465	421.9254989023912	92.36	0.30647	92.528	92.345	92.651	0.16834					15	9	2	0	0	0	0.11916	1	38664	38664		0.86438	0.16671	1	1447800	+		22766	10576	11304	11357	26186	26186					0.13358556959587986
NKIALIDIL	9	Unmodified	_NKIALIDIL_					0	0	0			REV__tr|A0A7D6VSJ1|A0A7D6VSJ1_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22940PE=4SV=1	REV__tr|A0A7D6VSJ1|A0A7D6VSJ1_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22940PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2186462283134	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.429	1	59.429	58.929	59.929	0								0	0	0	0.42693	1	24780	24780		1.0715	0	1		+		22767	15449	11305	11358	26187	26187					0.12748077033870686
NKIFVNGIGSR	11	Unmodified	_NKIFVNGIGSR_					0	0	0			REV__ENSG00000254535|ENST00000421491|PABPC4L	REV__ENSG00000254535|ENST00000421491|PABPC4L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1434509158134	4	301.925378	1203.67241	1.4238	0.00042987	0.88798	0.0002681	2.3117	0.00069797	302.1757557790125	60.965	0.15542	61.294	61.234	61.39	0.32874					6	4	2	0	0	0	0.14606	1	25533	25533		0.08335	0.08335	1	87938	+		22768	11963	11306	11359	26188	26188					0.07871597037274114
NKIGKKRIE	9	Unmodified	_NKIGKKRIE_					0	0	0		DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537719607353	3	362.564502	1084.67168	1.614	0.00058519	-2.0452	-0.00074153	-0.43121	-0.00015634	362.5640571967218	79.315	0.34515	80.582	80.378	80.723	1.2668					17	10	2	0	0	0	0.11941	1	33268	33268		1.0715	0.8646	1	712380			22769	405	11307	11360	26189	26189					0.1327280238822368
NKIGKKRIE	9	Unmodified	_NKIGKKRIE_					0	0	0		DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	DHRS7|p.M312I|1|0.24|ENSG00000100612|chr14:60149389-60149389|C/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2534667849541	3	362.564502	1084.67168	1.8763	0.00068029	-3.6773	-0.0013333	-1.801	-0.00065297	362.56283459493704	78.747	0.37216	80.482	80.258	80.63	1.735					25	11	3	0	0	0	0.11941	1	33013	33013		1.0715	0	1	384310			22770	405	11307	11360	26190	26190					0.1327280238822368
NKIHLFLVLL	10	Unmodified	_NKIHLFLVLL_					0	0	0			REV__ENSG00000085265|ENST00000371806|FCN1	REV__ENSG00000085265|ENST00000371806|FCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1988098025322	4	303.198405	1208.76451	-0.66004	-0.00020012	1.632	0.00049481	0.97193	0.00029469	303.19880336818323	32.401	0.78024	33.679	33.168	33.949	1.2782					60	26	4	0	0	0	0.89803	1	13659	13659		0.69767	0.69767	1	7402200	+		22771	8847	11308	11361	26191	26191					0.16848307121586004
NKIHRLPVI	9	Unmodified	_NKIHRLPVI_					0	0	0		ENST00000488258.5_1_7:151265789-151372578:-|nuORF;nc|ENSG00000106617|Q9UGJ0-2|PRKAG2;nc|ENSG00000106617|Q9UGJ0-3|PRKAG2;GBX1-PRKAG2|1|fusion;ENSG00000106617|ENST00000287878|PRKAG2;ENST00000550448.5_1_12:49398244-49398481:-|nuORF;ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	ENST00000488258.5_1_7:151265789-151372578:-|nuORF;ENST00000546531.5_1_12:49396684-49399341:-|nuORF	ENST00000488258.5_1_7:151265789-151372578:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2524902224541	3	363.901226	1088.68185	-0.71096	-0.00025872	-0.32981	-0.00012002	-1.0408	-0.00037874	364.2350024947118	56.85	0.88328	56.85	56.34	57.224	0					37	29	2	0	0	0	0.11955	1	23878	23878		0.23584	0	1	481640			22772	1575;4591	11309	11362	26192	26192					0.14105410113438666
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1926147341728	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.031	1	84.031	83.531	84.531	0								0	0	0	0.42693	1	35017	35017		1.0715	0.61312	1				22773	2657	11310	11363	26193	26193					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1909973025322	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.124	1	70.446	69.946	70.946	0.32224								0	0	0	0.42693	1	29348	29348		1.0715	0.61312	1				22774	2657	11310	11363	26194	26194					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1911498904228	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.615	1	92.783	92.283	93.283	0.16835								0	0	0	0.42693	1	38784	38784		1.0715	0.29493	1				22775	2657	11310	11363	26195	26195					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1917602419853	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.452	1	60.872	60.372	61.372	1.4196								0	0	0	0.42693	1	24930	24930		1.0715	0.61312	1				22776	2657	11310	11363	26196	26196					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1917907595634	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.219	1	28.966	28.466	29.466	1.747								0	0	0	0.42693	1	11391	11391		1.0715	0.61312	1				22777	2657	11310	11363	26197	26197					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1918212771416	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.944	1	60.913	60.413	61.413	1.969								0	0	0	0.42693	1	24731	24731		1.0715	0.61312	1				22778	2657	11310	11363	26198	26198					0.07245180025699938
NKIIALGHS	9	Unmodified	_NKIIALGHS_					0	0	0		nc|ENSG00000135318|P21589-2|NT5E;ENSG00000135318|ENST00000257770|NT5E	nc|ENSG00000135318|P21589-2|NT5E	nc|ENSG00000135318|P21589-2|NT5E	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1913940310478	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.428	1	72.266	71.766	72.766	1.8378								0	0	0	0.42693	1	29542	29542		1.0715	0.61312	1				22779	2657	11310	11363	26199	26199					0.07245180025699938
NKIIGLLEHR	10	Unmodified	_NKIIGLLEHR_					0	0	0			REV__ENST00000344517.4_1_1:229653148-229653226:-|nuORF	REV__ENST00000344517.4_1_1:229653148-229653226:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	596.8634521365166	2	596.861672	1191.70879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.765	1	71.765	71.265	72.265	0								0	0	0	0.6607	1	29885	29885		3.2813	0.97858	1		+		22780	12519	11311	11364	26200	26200					0.12060473933956928
NKIIKAWRKQF	11	Unmodified	_NKIIKAWRKQF_					0	0	0			REV__ENSG00000274529|ENST00000536498|SEBOX	REV__ENSG00000274529|ENST00000536498|SEBOX	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	359.2332641482353	4	358.720036	1430.85104	1.9087	0.0006847	4.2706	0.0015319	6.1793	0.0022166	358.97192130970575	48.041	0.15458	50.018	49.929	50.084	1.9772					6	4	2	0	0	0	0.14606	1	20140	20140		0.45452	0.35968	1	219440	+		22781	12013	11312	11365	26201	26201					0.15284686676136516
NKIIRLIRYR	10	Unmodified	_NKIIRLIRYR_					0	0	0		ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	336.1612731814384	4	336.97012	1343.85137	1.9594	0.00066026	1.2596	0.00042446	3.219	0.0010847	336.97126644276625	58.787	0.80657	59.112	58.495	59.301	0.32553					32	26	2	0	0	0	0.12561	1	24501	24501		0.13989	0.04505	1	2020000			22782	4890	11313	11366	26202	26202					0.19320106396003212
NKIIRLIRYR	10	Unmodified	_NKIIRLIRYR_					0	0	0		ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	336.2022888064384	4	336.97012	1343.85137	1.4114	0.00047559	2.8301	0.00095367	4.2415	0.0014293	336.9714773316252	79.941	0.18442	81.192	81.078	81.263	1.2512					6	5	2	0	0	0	0.12561	1	33521	33521		0.13989	0.056541	1	236560			22783	4890	11313	11366	26203	26203					0.19320106396003212
NKIIRLIRYR	10	Unmodified	_NKIIRLIRYR_					0	0	0		ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	336.97012	1343.85137	0.82211	0.00027703	4.0345	0.0013595	4.8566	0.0016365	336.971776424757	79.847	0.093666	81.564	81.506	81.6	1.7167	0.18579	0.00074612	NaN	0.13989	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	206660			22784	4890	11313	11366							0.19320106396003212
NKIKEKIRRLC	11	Unmodified	_NKIKEKIRRLC_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL;ENST00000489996.1_1_10:88226942-88232014:-|nuORF;ENSG00000062650|ENST00000298767|WAPL;nc|ENSG00000062650|Q7Z5K2-3|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.6266357302666	3	467.622134	1399.84457	3.5827	0.0016754	3.1999	0.0014963	6.7826	0.0031717	467.6235704354732	96.921	0.18836	97.227	97.101	97.289	0.3062					13	5	3	0	0	0	1.0388	1	40755	40755		0.50596	0.09769	1	16193000			22785	7825	11314	11367	26204	26204					0.16064425453123476
NKIKLTVL	8	Unmodified	_NKIKLTVL_					0	0	0		nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	928.6206542849541	1	928.618979	927.611703	2.8006	0.0026007	-0.86001	-0.00079862	1.9406	0.0018021	928.6179073044298	107.73	0.23769	107.78	107.64	107.88	0.052452					46	12	5	0	0	0	0.89176	1	46179	46179		0.79363	0	1	1200500000			22786	7974	11315	11368	26205	26205					0.14500111724964881
NKIKLTVL	8	Unmodified	_NKIKLTVL_					0	0	0		nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.6198608279228	1	928.618979	927.611703	3.3361	0.0030979	-1.9646	-0.0018244	1.3714	0.0012736	928.6168868375767	107.71	0.21825	107.87	107.73	107.95	0.15781					46	11	5	0	0	0	0.89176	1	46422	46422		0.79363	0	1	3634299999.9999995			22787	7974	11315	11368	26206	26206					0.14500111724964881
NKIKLTVL	8	Unmodified	_NKIKLTVL_					0	0	0		nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.6193115115166	1	928.618979	927.611703	3.3996	0.0031569	-2.6991	-0.0025065	0.70042	0.00065042	928.6162189627867	107.68	0.50795	107.84	107.43	107.94	0.15795					58	26	5	0	0	0	0.89176	1	46284	46284		0.79363	0	1	3700899999.9999995			22788	7974	11315	11368	26207	26207					0.14500111724964881
NKIKRYIR	8	Unmodified	_NKIKRYIR_					0	0	0		tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2337829470634	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.608	1	67.931	67.431	68.431	0.32269								0	0	0	1.0178	1	28306	28306		0.40072	0	1				22789	16158	11316	11369	26208	26208					0.13584525970668437
NKIKRYIR	8	Unmodified	_NKIKRYIR_					0	0	0		tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2326843142509	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.119	1	68.442	67.942	68.942	0.32269								0	0	0	1.0178	1	28515	28515		0.40072	0	1				22790	16158	11316	11369	26209	26209					0.13584525970668437
NKIKRYIR	8	Unmodified	_NKIKRYIR_					0	0	0		tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2334472537041	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.364	1	68.686	68.186	69.186	0.32224								0	0	0	1.0178	1	28617	28617		0.40072	0	1				22791	16158	11316	11369	26210	26210					0.13584525970668437
NKIKRYIR	8	Unmodified	_NKIKRYIR_					0	0	0		tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2330200076103	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.738	1	70.06	69.56	70.56	0.32224								0	0	0	1.0178	1	29188	29188		0.40072	0	1				22792	16158	11316	11369	26211	26211					0.13584525970668437
NKIKRYIR	8	Unmodified	_NKIKRYIR_					0	0	0		tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	tr|A0A553SHL6|A0A553SHL6_NIACIRibonucleasePproteincomponentOS=NialliacirculansOX=1397GN=rnpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2332336306572	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.324	1	74.649	74.149	75.149	0.32464								0	0	0	1.0178	1	31088	31088		0.40072	0	1				22793	16158	11316	11369	26212	26212					0.13584525970668437
NKILPAAA	8	Unmodified	_NKILPAAA_					0	0	0		RBBP6|p.K1580Rfs*6|1|0.13|ENSG00000122257|chr16:24571804-24571805|AA/-|frameshift_variant;nc|ENSG00000122257|Q7Z6E9-2|RBBP6;ENSG00000122257|ENST00000319715|RBBP6	RBBP6|p.K1580Rfs*6|1|0.13|ENSG00000122257|chr16:24571804-24571805|AA/-|frameshift_variant	RBBP6|p.K1580Rfs*6|1|0.13|ENSG00000122257|chr16:24571804-24571805|AA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2525817751884	2	399.247621	796.480688	2.5812	0.0010305	-0.29881	-0.0001193	2.2824	0.00091122	399.247729179897	61.281	1.2447	62.699	62.375	63.619	1.4177					62	39	3	0	0	0	0.89178	1	25905	25905		0.69038	0	1	9607700			22794	2151	11317	11370	26213	26213					0.07430721076934788
NKILRQQAR	9	Unmodified	_NKILRQQAR_					0	0	0			REV__ENSG00000196233|ENST00000421806|LCOR	REV__ENSG00000196233|ENST00000421806|LCOR	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2328369021416	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.61	1	95.799	95.299	96.299	1.1887								0	0	0	0.42693	1	39803	39803		2.4985	1.427	1		+		22795	11622	11318	11371	26214	26214					0.11526436476970048
NKILSDKF	8	Unmodified	_NKILSDKF_					0	0	0		tr|A0A553SFK6|A0A553SFK6_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_08940PE=4SV=1	tr|A0A553SFK6|A0A553SFK6_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_08940PE=4SV=1	tr|A0A553SFK6|A0A553SFK6_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_08940PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1866943240166	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.9	1	51.228	50.728	51.728	0.32824								0	0	0	1.0178	1	21324	21324		1.4819	0	1				22796	16061	11319	11372	26215	26215					0.05570357931560466
NKILVIAI	8	Unmodified	_NKILVIAI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.3022033572197	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.449	1	91.449	90.949	91.949	0								0	0	0	1.0178	1	38219	38219		0.69038	0	1				22797	1533	11320	11373	26216	26216					0.14424726696256585
NKILVIAI	8	Unmodified	_NKILVIAI_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.3015930056572	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.579	1	91.579	91.079	92.079	0								0	0	0	1.0178	1	38272	38272		0.69038	0	1				22798	1533	11320	11373	26217	26217					0.14424726696256585
NKILVTHFV	9	Unmodified	_NKILVTHFV_					0	0	0		nc|ENSG00000213439|P0C628|OR5AC1	nc|ENSG00000213439|P0C628|OR5AC1	nc|ENSG00000213439|P0C628|OR5AC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	357.5508300662041	3	357.550082	1069.62842	1.0875	0.00038885	0.89491	0.00031997	1.9825	0.00070883	357.55025055240526	39.965	1.007	41.276	40.907	41.914	1.3102					47	32	2	0	0	0	0.76456	1	16735	16735		2.7352	1.1429	1	1716400			22799	7996	11321	11374	26218	26218					0.09638612610956443
NKILVTHFV	9	Unmodified	_NKILVTHFV_					0	0	0		nc|ENSG00000213439|P0C628|OR5AC1	nc|ENSG00000213439|P0C628|OR5AC1	nc|ENSG00000213439|P0C628|OR5AC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	357.5510742068291	3	357.550082	1069.62842	1.2532	0.00044809	1.1414	0.00040809	2.3946	0.00085619	357.5502465774019	39.563	0.58202	41.425	41.033	41.615	1.8624					34	18	3	0	0	0	0.83213	1	16565	16565		1.0715	0.10919	1	1127400			22800	7996	11321	11374	26219	26219					0.09638612610956443
NKIQLLWIIV	10	Unmodified	_NKIQLLWIIV_					0	0	0		tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1338683962822	4	310.701046	1238.77508	0.28539	8.8671E-05	1.7066	0.00053024	1.992	0.00061891	310.7013130564932	27.208	0.49517	27.47	27.328	27.824	0.26173					32	15	3	0	0	0	0.12561	1	11483	11483		0	0	1	765690			22801	16982	11322	11375	26220	26220					0.16524289776043588
NKIQLLWIIV	10	Unmodified	_NKIQLLWIIV_					0	0	0		tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1343871951103	4	310.701046	1238.77508	-0.075893	-2.358E-05	2.0511	0.00063729	1.9752	0.00061371	310.7019746081892	26.747	0.30733	28.018	27.778	28.085	1.2715					20	9	3	0	0	0	0.12561	1	11122	11122		0.13989	0	1	1215700			22802	16982	11322	11375	26221	26221					0.16524289776043588
NKIQLLWIIV	10	Unmodified	_NKIQLLWIIV_					0	0	0		tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1338378787041	4	310.701046	1238.77508	-0.036076	-1.1209E-05	1.208	0.00037532	1.1719	0.00036411	310.70145619377547	25.76	0.48583	27.476	27.276	27.762	1.7167					22	15	2	0	0	0	0.12561	1	10736	10736		0.13989	0.056541	1	703990			22803	16982	11322	11375	26222	26222					0.16524289776043588
NKIQLLWIIV	10	Unmodified	_NKIQLLWIIV_					0	0	0		tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	tr|A0A7D6VXH3|A0A7D6VXH3_9CLOTCDP-alcoholphosphatidyltransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08635PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1333190798759	4	310.701046	1238.77508	0.1751	5.4405E-05	0.81022	0.00025174	0.98532	0.00030614	310.95244298953975	31.461	0.4487	33.286	33.128	33.577	1.8246					22	16	2	0	0	0	0.12561	1	13304	13304		0	0	1	810220			22804	16982	11322	11375	26223	26223					0.16524289776043588
NKIRKQQQVP	10	Unmodified	_NKIRKQQQVP_					0	0	0		ENSG00000124641|ENST00000265350|MED20	ENSG00000124641|ENST00000265350|MED20	ENSG00000124641|ENST00000265350|MED20	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1342651247978	4	310.438652	1237.7255	-0.10242	-3.1794E-05	3.3956	0.0010541	3.2932	0.0010223	310.43962752328974	23.882	1.0628	25.566	25.387	26.45	1.6845					60	35	2	0	0	0	0.12555	1	10283	10283		0.13989	0	1	1100400			22805	2237	11323	11376	26224	26224					0.11614974819917734
NKITVVGV	8	Unmodified	_NKITVVGV_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2627136111259	2	415.260728	828.506903	2.7952	0.0011607	2.6968	0.0011199	5.492	0.0022806	415.2617106276002	85.326	0.65533	85.579	85.196	85.851	0.25227					41	20	3	0	0	0	0.88587	1	35699	35699		5.2307	0	1	2256000			22806	2611;7227	11324	11377	26225	26225					0.08578990248429363
NKITVVGV	8	Unmodified	_NKITVVGV_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	415.260728	828.506903	1.3971	0.00058016	3.0219	0.0012549	4.419	0.001835	415.261839881961	84.181	0.44069	85.369	85.115	85.556	1.1879	-0.015773	0.00012513	NaN	5.2307	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2683000			22807	2611;7227	11324	11377							0.08578990248429363
NKITVVGV	8	Unmodified	_NKITVVGV_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA;nc|ENSG00000134333|P00338-2|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000469976.2_1_11:18418389-18418551:+|nuORF;ENST00000494573.6_1_11:18418389-18421097:+|nuORF;ENSG00000111716|ENST00000350669|LDHB;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA;ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENSG00000134333|ENST00000422447|LDHA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	415.260728	828.506903	1.5671	0.00065076	2.9317	0.0012174	4.4988	0.0018682	415.26160033016413	83.568	0.36734	85.206	84.98	85.347	1.6379	-0.17853	5.0222E-05	NaN	5.2307	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2249800			22808	2611;7227	11324	11377							0.08578990248429363
NKIVAAIV	8	Unmodified	_NKIVAAIV_					0	0	0			REV__LPAR3|p.A175Pfs*61|1|0.4|ENSG00000171517|chr1:84865598-84865598|C/-|frameshift_variant	REV__LPAR3|p.A175Pfs*61|1|0.4|ENSG00000171517|chr1:84865598-84865598|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	414.2718383669853	2	414.271096	826.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.09	1	63.419	62.919	63.919	0.32974								0	0	0	1.0178	1	26432	26432		0.69038	0	1		+		22809	11031	11325	11378	26226	26226					0.10743580628070504
NKIVKVRTR	9	Unmodified	_NKIVKVRTR_					0	0	0			REV__tr|A0A7D6ZK12|A0A7D6ZK12_9CLOTProteinRecAOS=ClostridiumintestinaleOX=36845GN=recAPE=3SV=1	REV__tr|A0A7D6ZK12|A0A7D6ZK12_9CLOTProteinRecAOS=ClostridiumintestinaleOX=36845GN=recAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1012756228447	3	371.912013	1112.71421	-0.31952	-0.00011884	-1.147	-0.00042659	-1.4666	-0.00054543	371.91239605468337	59.221	0.12722	59.221	59.13	59.257	0					5	3	2	0	0	0	0.11955	1	24692	24692		0.23584	0	1	611340	+		22810	15672	11326	11379	26227	26227					0.16236197516445827
NKKAAPRA	8	Unmodified	_NKKAAPRA_					0	0	0		ENST00000568570.1_1_16:31993258-32005419:+|nuORF;nc|ENSG00000275832|Q9P227-2|ARHGAP23;ENSG00000275832|ENST00000622683|ARHGAP23	ENST00000568570.1_1_16:31993258-32005419:+|nuORF	ENST00000568570.1_1_16:31993258-32005419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	428.2625610232353	2	428.261594	854.508634	2.5655	0.0010987	0.013577	5.8146E-06	2.5791	0.0011045	428.2614299845621	73.216	0.82916	73.541	73.276	74.105	0.32494					93	26	5	0	0	0	0.89051	2	30565	30565;30757		2.3027	1.6124	1	261670000			22811	5463	11327	11380	26228;26229	26228					0.07556044057025701
NKKAAPRA	8	Unmodified	_NKKAAPRA_					0	0	0		ENST00000568570.1_1_16:31993258-32005419:+|nuORF;nc|ENSG00000275832|Q9P227-2|ARHGAP23;ENSG00000275832|ENST00000622683|ARHGAP23	ENST00000568570.1_1_16:31993258-32005419:+|nuORF	ENST00000568570.1_1_16:31993258-32005419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.2624999880791	2	428.261594	854.508634	2.6661	0.0011418	0.84244	0.00036078	3.5086	0.0015026	428.26184252814	72.358	0.67717	73.688	73.391	74.069	1.3297					77	21	5	0	0	0	0.89051	2	30292	30292;30450		2.3027	0.24298	1	103450000			22812	5463	11327	11380	26230;26231	26230					0.07556044057025701
NKKAKAIA	8	Unmodified	_NKKAKAIA_					0	0	0		tr|A0A7D6ZVL5|A0A7D6ZVL5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15440PE=4SV=1	tr|A0A7D6ZVL5|A0A7D6ZVL5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15440PE=4SV=1	tr|A0A7D6ZVL5|A0A7D6ZVL5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15440PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2756530642509	2	422.27417	842.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.554	1	75.875	75.375	76.375	0.32163								0	0	0	1.0178	1	31598	31598		0.69038	0	1				22813	17155	11328	11381	26232	26232					0.10622098859596463
NKKELKREIKE	11	Unmodified	_NKKELKREIKE_					0	0	0		ENST00000508756.2_1_5:98204705-98207835:-|nuORF	ENST00000508756.2_1_5:98204705-98207835:-|nuORF	ENST00000508756.2_1_5:98204705-98207835:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2860290408134	3	472.284064	1413.83036	3.3354	0.0015752	-1.2356	-0.00058356	2.0997	0.00099167	472.28333069559534	87.104	1.4196	87.348	87.22	88.64	0.24387					116	47	3	0	0	0	1.039	1	36754	36754		0.45452	0.31463	1	4354100			22814	7018	11329	11382	26233	26233					0.14000051505831834
NKKGAYIE	8	Unmodified	_NKKGAYIE_					0	0	0			REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.1705810427666	3	308.17127	921.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.108	1	50.495	49.995	50.995	1.388								0	0	0	1.0178	1	20557	20557		1.4819	0	1		+		22815	10545	11330	11383	26234	26234					0.02809498380418063
NKKGAYIE	8	Unmodified	_NKKGAYIE_					0	0	0			REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.1702453494072	3	308.17127	921.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.208	1	50.185	49.685	50.685	1.9772								0	0	0	1.0178	1	20192	20192		1.4819	0	1		+		22816	10545	11330	11383	26235	26235					0.02809498380418063
NKKGAYIE	8	Unmodified	_NKKGAYIE_					0	0	0			REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	REV__nc|ENSG00000158019|Q9NXR7-4|BABAM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.1709777712822	3	308.17127	921.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.884	1	50.861	50.361	51.361	1.9772								0	0	0	1.0178	1	20476	20476		1.4819	0	1		+		22817	10545	11330	11383	26236	26236					0.02809498380418063
NKKGGKVV	8	Unmodified	_NKKGGKVV_					0	0	0		tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2683288455009	2	415.266345	828.518136	2.9638	0.0012308	3.8118	0.0015829	6.7756	0.0028137	415.26759534165103	97.715	0.12318	97.806	97.715	97.838	0.090889					6	3	2	0	0	0	0.89051	1	40888	40888		2.3027	1.6124	1	2206100			22818	17229	11331	11384	26237	26237					0.09701812342564153
NKKGGKVV	8	Unmodified	_NKKGGKVV_					0	0	0		tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	tr|A0A7D7A135|A0A7D7A135_9CLOTMOSCdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02190PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	415.266345	828.518136	0.30741	0.00012766	7.7506	0.0032186	8.058	0.0033462	415.2695494929311	97.801	0.15583	97.801	97.721	97.877	0	-0.0026842	0.00083866	NaN	2.3027	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4420700			22819	17229	11331	11384							0.09701812342564153
NKKGKLRKD	9	Unmodified	_NKKGKLRKD_					0	0	0		tr|A0A7D6VWA6|A0A7D6VWA6_9CLOTHD-GYPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03335PE=4SV=1	tr|A0A7D6VWA6|A0A7D6VWA6_9CLOTHD-GYPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03335PE=4SV=1	tr|A0A7D6VWA6|A0A7D6VWA6_9CLOTHD-GYPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03335PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2531005740166	3	362.896252	1085.66693	1.7411	0.00063182	3.7956	0.0013774	5.5366	0.0020092	363.23142200069253	77.495	0.094513	77.811	77.732	77.826	0.31653					4	2	2	0	0	0	0.11941	1	32397	32397		1.0715	0.8646	1	250640			22820	16973	11332	11385	26238	26238					0.12751918245453453
NKKHLFKLV	9	Unmodified	_NKKHLFKLV_					0	0	0			REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	REV__tr|A0A7D6W2J3|A0A7D6W2J3_9CLOTTrypsin-likepeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06460PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2401000857353	3	376.241359	1125.70225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.159	1	37.435	36.935	37.935	1.2762								0	0	0	0.42693	1	15179	15179		0.96228	0.26461	1		+		22821	15604	11333	11386	26239	26239					0.14442580773265945
NKKIIKLLPLV	11	Unmodified	_NKKIIKLLPLV_					0	0	0			REV__nc|ENSG00000183054|Q99666-2|RGPD5	REV__nc|ENSG00000183054|Q99666-2|RGPD5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	639.6294433474541	2	639.947216	1277.87988	1.5148	0.0009694	-4.2061	-0.0026917	-2.6912	-0.0017223	639.9461104775902	104.57	0.30451	104.57	104.36	104.66	0					27	15	2	0	0	0	0.14606	1	44218	44218		0.35063	0	1	8583600	+		22822	8547	11334	11387	26240	26240					0.2520541125259115
NKKILEFVKF	10	Unmodified	_NKKILEFVKF_					0	0	0		tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1974670290947	4	317.195862	1264.75434	1.0997	0.00034881	2.0773	0.00065891	3.177	0.0010077	317.19645935195933	42.685	1.6146	43.006	42.374	43.988	0.32058					109	52	3	0	0	0	0.89803	1	17888	17888		1.5923	0.26264	1	3644000			22823	16844	11335	11388	26241	26241					0.13255699396358978
NKKKASQL	8	Unmodified	_NKKKASQL_					0	0	0			REV__ENST00000537839.5_1_11:62649261-62650080:+|nuORF	REV__ENST00000537839.5_1_11:62649261-62650080:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1912719607353	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.135	1	68.024	67.524	68.524	1.8889								0	0	0	1.0178	1	27745	27745		1.6526	0.17072	1		+		22824	13763	11336	11389	26242	26242					0.08901180025713984
NKKKFLCKK	9	Unmodified	_NKKKFLCKK_					0	0	0			REV__ENSG00000067715|ENST00000261205|SYT1	REV__ENSG00000067715|ENST00000261205|SYT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	380.2284118533134	3	379.5706	1135.68997	2.1188	0.00080422	2.2975	0.00087208	4.4163	0.0016763	379.90587546575944	75.038	0.3416	76.345	76.182	76.524	1.3063					18	10	2	0	0	0	0.11941	1	31560	31560		1.0715	0.20709	1	577200	+		22825	8695	11337	11390	26243	26243					0.12755221038560194
NKKKFLCKK	9	Unmodified	_NKKKFLCKK_					0	0	0			REV__ENSG00000067715|ENST00000261205|SYT1	REV__ENSG00000067715|ENST00000261205|SYT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	380.2284118533134	3	379.5706	1135.68997	1.7253	0.00065488	2.5135	0.00095404	4.2388	0.0016089	379.5712249545875	75.572	0.52546	76.878	76.493	77.018	1.3063					27	16	2	0	0	0	0.11941	1	31560	31560		1.0715	0.20709	1	1061800	+		22826	8695	11337	11390	26244	26244					0.12755221038560194
NKKKFLCKK	9	Unmodified	_NKKKFLCKK_					0	0	0			REV__ENSG00000067715|ENST00000261205|SYT1	REV__ENSG00000067715|ENST00000261205|SYT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	380.2287780642509	3	379.5706	1135.68997	2.5161	0.00095505	1.7862	0.000678	4.3024	0.001633	379.57090725138073	74.899	0.9028	76.68	76.324	77.227	1.7817					40	28	2	0	0	0	0.11941	1	31326	31326		1.0715	0.8646	1	694180	+		22827	8695	11337	11390	26245	26245					0.12755221038560194
NKKKFLCKK	9	Unmodified	_NKKKFLCKK_					0	0	0			REV__ENSG00000067715|ENST00000261205|SYT1	REV__ENSG00000067715|ENST00000261205|SYT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	379.5706	1135.68997	2.6532	0.0010071	-0.29918	-0.00011356	2.354	0.00089351	379.9047151863165	74.447	0.31777	76.243	76.021	76.339	1.7962	-0.050829	-0.0018342	NaN	1.0715	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273830	+		22828	8695	11337	11390							0.12755221038560194
NKKKKKEK	8	Unmodified	_NKKKKKEK_					0	0	0			REV__ENST00000493579.1_1_3:180041073-180041484:+|nuORF	REV__ENST00000493579.1_1_3:180041073-180041484:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2273132205009	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.05	1	114.05	113.55	114.55	0								0	0	0	1.0178	1	49256	49256		0.40072	0	1		+		22829	10516	11338	11391	26246	26246					0.1522170387654569
NKKKKKEK	8	Unmodified	_NKKKKKEK_					0	0	0			REV__ENST00000493579.1_1_3:180041073-180041484:+|nuORF	REV__ENST00000493579.1_1_3:180041073-180041484:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2278320193291	3	344.229231	1029.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.44	1	119.44	118.94	119.94	0								0	0	0	1.0178	1	51438	51438		0.40072	0	1		+		22830	10516	11338	11391	26247	26247					0.1522170387654569
NKKKKKKPI	9	Unmodified	_NKKKKKKPI_					0	0	0			REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617370486259	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	104.96	104.46	105.46	0								0	0	0	0.42693	1	44437	44437		0.23584	0	1		+		22831	8120	11339	11392	26248	26248					0.20914842698698521
NKKKKKKPI	9	Unmodified	_NKKKKKKPI_					0	0	0			REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617675662041	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.34	1	105.34	104.84	105.84	0								0	0	0	0.42693	1	44686	44686		0.23584	0	1		+		22832	8120	11339	11392	26249	26249					0.20914842698698521
NKKKKKKPI	9	Unmodified	_NKKKKKKPI_					0	0	0			REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2622863650322	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.44	1	105.44	104.94	105.94	0								0	0	0	0.42693	1	44760	44760		0.23584	0	1		+		22833	8120	11339	11392	26250	26250					0.20914842698698521
NKKKKKKPI	9	Unmodified	_NKKKKKKPI_					0	0	0			REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2619506716728	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.64	1	105.64	105.14	106.14	0								0	0	0	0.42693	1	44889	44889		0.23584	0	1		+		22834	8120	11339	11392	26251	26251					0.20914842698698521
NKKKKKKPI	9	Unmodified	_NKKKKKKPI_					0	0	0			REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	REV__AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|9|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2608215212822	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.05	1	106.05	105.55	106.55	0								0	0	0	0.42693	1	45165	45165		0.23584	0	1		+		22835	8120	11339	11392	26252	26252					0.20914842698698521
NKKKKLLH	8	Unmodified	_NKKKKLLH_					0	0	0			REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.8950378298759	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.47	1	119.51	119.01	120.01	0.041039								0	0	0	1.0178	1	51295	51295		0.40072	0	1		+		22836	12147	11340	11393	26253	26253					0.15686025084755784
NKKKKLLH	8	Unmodified	_NKKKKLLH_					0	0	0			REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	REV__ENST00000252725.9_1_7:98992108-98992360:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8951293826103	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.15	1	115.3	114.8	115.8	0.14976								0	0	0	1.0178	1	49798	49798		0.40072	0	1		+		22837	12147	11340	11393	26254	26254					0.15686025084755784
NKKKQLSRRRL	11	Unmodified	_NKKKQLSRRRL_					0	0	0			REV__ENST00000297156.3_1_5:134086636-134086738:+|nuORF	REV__ENST00000297156.3_1_5:134086636-134086738:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	358.1478149294853	4	357.482389	1425.90045	1.7249	0.00061661	-2.7626	-0.00098759	-1.0378	-0.00037098	357.73205563237747	61.555	0.092957	62.973	62.927	63.02	1.4177					4	2	2	0	0	0	0.14606	1	25827	25827		0.08335	0	1	256460	+		22838	12301	11341	11394	26255	26255					0.20453394684977866
NKKLFGIHV	9	Unmodified	_NKKLFGIHV_					0	0	0		ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	352.0608703494072	3	352.550193	1054.62875	-0.93691	-0.00033031	3.4085	0.0012017	2.4716	0.00087135	352.8862214388139	53.122	0.37158	53.122	52.854	53.225	0					16	12	2	0	0	0	0.11941	1	22089	22089		0.23584	0.23584	1	737060			22839	6567	11342	11395	26256	26256					0.10362032330772308
NKKLFGIHV	9	Unmodified	_NKKLFGIHV_					0	0	0		ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	352.0602599978447	3	352.550193	1054.62875	1.3692	0.00048271	2.7811	0.00098048	4.1503	0.0014632	352.5506619268493	52.349	0.40051	52.675	52.496	52.897	0.32554					20	12	2	0	0	0	0.11941	1	22024	22024		1.0715	0.61312	1	582670			22840	6567	11342	11395	26257	26257					0.10362032330772308
NKKLFGIHV	9	Unmodified	_NKKLFGIHV_					0	0	0		ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	ENST00000442722.5_1_2:150062567-150062675:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	352.550193	1054.62875	-0.5868	-0.00020688	3.8776	0.0013671	3.2908	0.0011602	352.8862403441037	51.09	0.30356	52.484	52.346	52.65	1.3938	-0.095629	0.00061818	NaN	1.0715	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	888530			22841	6567	11342	11395							0.10362032330772308
NKKLGQLV	8	Unmodified	_NKKLGQLV_					0	0	0			REV__ENSG00000151023|ENST00000331161|ENKUR	REV__ENSG00000151023|ENST00000331161|ENKUR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	300.5274841189384	3	300.527277	898.560001	-0.60612	-0.00018215	1.9711	0.00059236	1.3649	0.0004102	300.5273446588968	31.923	0.58473	33.204	32.803	33.388	1.2813					45	19	3	0	0	0	0.87935	1	13331	13331		6.7232	0	1	3515900	+		22842	10394	11343	11396	26258	26258					0.10666368031093043
NKKLKEYILY	10	Unmodified	_NKKLKEYILY_					0	0	0		ENSG00000151838|ENST00000537690|CCDC175	ENSG00000151838|ENST00000537690|CCDC175	ENSG00000151838|ENST00000537690|CCDC175	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.0048095583916	4	328.697232	1310.75982	-2.367	-0.00077803	2.8083	0.00092309	0.44131	0.00014506	328.69824335539977	31.247	0.60599	31.247	30.928	31.534	0					45	19	3	0	0	0	0.12561	1	13193	13193		0.13989	0.056541	1	1743200			22843	3304	11344	11397	26259	26259					0.11687378188184994
NKKMLELE	8	Unmodified	_NKKMLELE_					0	0	0			REV__tr|A0A7D6VNE5|A0A7D6VNE5_9CLOTGuaninedeaminaseOS=ClostridiumintestinaleOX=36845GN=guaDPE=3SV=1	REV__tr|A0A7D6VNE5|A0A7D6VNE5_9CLOTGuaninedeaminaseOS=ClostridiumintestinaleOX=36845GN=guaDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	336.2012817263603	3	335.519682	1003.53722	1.4883	0.00049935	-0.69289	-0.00023248	0.79539	0.00026687	335.5193234058937	55.048	0.16255	55.369	55.295	55.457	0.32088					8	5	2	0	0	0	2.3239	1	23075	23075		0.40072	0	1	1118800	+		22844	15334	11345	11398	26260	26260					0.035589808512895615
NKKNAVRKKTV	11	Unmodified	_NKKNAVRKKTV_					0	0	0			REV__ENSG00000114127|ENST00000392981|XRN1	REV__ENSG00000114127|ENST00000392981|XRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.2747070193291	3	429.273611	1284.799	4.2506	0.0018247	-1.9457	-0.00083525	2.3049	0.00098941	429.27267842173205	93.592	0.50883	94.464	94.258	94.767	0.87176					44	15	4	0	0	0	1.0365	1	39417	39417		1.2148	0.51716	1	10114000	+		22845	9402	11346	11399	26261	26261					0.16799523262397997
NKKNEARL	8	Unmodified	_NKKNEARL_					0	0	0		nc|ENSG00000125246|Q8N0X4-2|CLYBL;ENSG00000125246|ENST00000339105|CLYBL	nc|ENSG00000125246|Q8N0X4-2|CLYBL	nc|ENSG00000125246|Q8N0X4-2|CLYBL	MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7853271365166	2	486.78289	971.551228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.721	1	70.043	69.543	70.543	0.32224								0	0	0	1.0178	1	29181	29181		7.2892	1.5288	1				22846	2251	11347	11400	26262	26262					0.06431394394610379
NKKNILKT	8	Unmodified	_NKKNILKT_					0	0	0			REV__ENST00000538944.1_1_11:68512411-68514777:-|nuORF	REV__ENST00000538944.1_1_11:68512411-68514777:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2076293826103	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.555	1	60.555	60.055	61.055	0								0	0	0	1.0178	1	25253	25253		1.4819	0	1		+		22847	13770	11348	11401	26263	26263					0.11662039576845018
NKKNILKT	8	Unmodified	_NKKNILKT_					0	0	0			REV__ENST00000538944.1_1_11:68512411-68514777:-|nuORF	REV__ENST00000538944.1_1_11:68512411-68514777:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.1980163455009	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.075	1	52.469	51.969	52.969	1.3938								0	0	0	1.0178	1	21384	21384		1.4819	0	1		+		22848	13770	11348	11401	26264	26264					0.11662039576845018
NKKNKFFLLS	10	Unmodified	_NKKNKFFLLS_					0	0	0		ENST00000396060.6_1_15:59944417-59944510:-|nuORF	ENST00000396060.6_1_15:59944417-59944510:-|nuORF	ENST00000396060.6_1_15:59944417-59944510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.5829040408134	3	413.580041	1237.71829	2.8936	0.0011967	3.5682	0.0014757	6.4618	0.0026725	413.5817176360878	93.753	0.3822	93.898	93.654	94.036	0.14493					29	11	3	0	0	0	0.89803	2	39210	39210;39264		0.62683	0.21856	1	1140100			22849	6297	11349	11402	26265;26266	26265					0.1089424221952413
NKKNKFFLLS	10	Unmodified	_NKKNKFFLLS_					0	0	0		ENST00000396060.6_1_15:59944417-59944510:-|nuORF	ENST00000396060.6_1_15:59944417-59944510:-|nuORF	ENST00000396060.6_1_15:59944417-59944510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.5825378298759	3	413.580041	1237.71829	3.2081	0.0013268	2.4874	0.0010287	5.6955	0.0023555	413.5815636757479	92.741	0.35385	94.018	93.843	94.197	1.277					22	10	3	0	0	0	0.89803	1	39056	39056		0.62683	0	1	434770			22850	6297	11349	11402	26267	26267					0.1089424221952413
NKKNKLQG	8	Unmodified	_NKKNKLQG_					0	0	0			REV__tr|A0A7D6VPU8|A0A7D6VPU8_9CLOTbeta-glucosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20450PE=4SV=1	REV__tr|A0A7D6VPU8|A0A7D6VPU8_9CLOTbeta-glucosidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20450PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2810241580009	2	465.279983	928.545414	1.9477	0.00090621	-0.36074	-0.00016784	1.5869	0.00073836	465.2798267030071	71.114	0.50887	71.114	70.78	71.288	0					26	15	2	0	0	0	0.88663	1	29615	29615		4.756	0.81161	1	958860	+		22851	15365	11350	11403	26268	26268					0.07828295882950442
NKKNKLYLCI	10	Unmodified	_NKKNKLYLCI_					0	0	0		tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	412.6449767947197	3	412.909281	1235.70601	2.5692	0.0010608	0.97803	0.00040384	3.5472	0.0014647	412.90996323288186	79.029	0.65829	80.295	79.939	80.598	1.2668					31	20	2	0	0	0	0.12557	1	33044	33044		0.62683	0.4675	1	330470			22852	17142	11351	11404	26269	26269					0.0975888248483443
NKKNKLYLCI	10	Unmodified	_NKKNKLYLCI_					0	0	0		tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	tr|A0A7D6ZTG8|A0A7D6ZTG8_9CLOTDUF2178domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20170PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	412.909281	1235.70601	2.0881	0.0008622	3.3378	0.0013782	5.4259	0.0022404	412.91128145554705	78.467	0.55874	80.202	79.885	80.444	1.735	-0.046688	0.0025203	NaN	0.62683	20	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	621390			22853	17142	11351	11404							0.0975888248483443
NKKNKNQLLH	10	Unmodified	_NKKNKNQLLH_					0	0	0			REV__ENSG00000164252|ENST00000312916|AGGF1	REV__ENSG00000164252|ENST00000312916|AGGF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.9123107790947	3	412.910561	1235.70985	2.9387	0.0012134	-0.84202	-0.00034768	2.0967	0.00086575	412.91047799730853	81.176	0.70981	82.409	82.133	82.842	1.2332					44	22	3	0	0	0	0.8974	1	34174	34174		1.7423	0.52744	1	898350	+		22854	10728	11352	11405	26270	26270					0.10142688302880742
NKKNKNQLLH	10	Unmodified	_NKKNKNQLLH_					0	0	0			REV__ENSG00000164252|ENST00000312916|AGGF1	REV__ENSG00000164252|ENST00000312916|AGGF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	412.910561	1235.70985	1.9523	0.00080614	0.19802	8.1763E-05	2.1504	0.00088791	412.91129089952375	80.554	0.87862	82.271	81.908	82.787	1.7167	-0.069075	0.00083183	NaN	1.7423	45	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	760580	+		22855	10728	11352	11405							0.10142688302880742
NKKNKSILIL	10	Unmodified	_NKKNKSILIL_					0	0	0		tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	tr|A0A7D7A5B2|A0A7D7A5B2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	390.9234191775322	3	390.923807	1169.74959	0.70099	0.00027403	-1.8478	-0.00072234	-1.1468	-0.0004483	390.9230159345811	88.351	0.45456	88.351	88.119	88.574	0					43	14	5	0	0	0	0.89803	1	36926	36926		0.62683	0.35781	1	4932900			22856	17296	11353	11406	26271	26271					0.17150815253626206
NKKNQKTK	8	Unmodified	_NKKNQKTK_					0	0	0			REV__ENST00000311151.9_2_8:26435550-26439510:+|nuORF	REV__ENST00000311151.9_2_8:26435550-26439510:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7995788455009	2	494.79854	987.582528	2.0147	0.00099686	0.86004	0.00042555	2.8747	0.0014224	494.79896396428256	89.52	0.47329	89.52	89.274	89.747	0					35	14	3	0	0	0	0.89051	2	37382	37382;37429		2.3027	0.4585	1	3413500	+		22857	12367	11354	11407	26272;26273	26272					0.08823967428702417
NKKNQKTK	8	Unmodified	_NKKNQKTK_					0	0	0			REV__ENST00000311151.9_2_8:26435550-26439510:+|nuORF	REV__ENST00000311151.9_2_8:26435550-26439510:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8009521365166	2	494.79854	987.582528	5.8965	0.0029176	-0.84719	-0.00041919	5.0493	0.0024984	494.7982234952372	88.601	0.45219	89.657	89.466	89.918	1.0562					31	13	3	0	0	0	0.89178	1	37327	37327		0.69038	0	1	2036600	+		22858	12367	11354	11407	26274	26274					0.08823967428702417
NKKNRRIM	8	Unmodified	_NKKNRRIM_					0	0	0			REV__ENST00000461454.1_1_2:175252452-175260304:-|nuORF	REV__ENST00000461454.1_1_2:175252452-175260304:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.3134033083916	2	530.313835	1058.61312	1.879	0.00099644	-2.9082	-0.0015423	-1.0293	-0.00054583	530.3120421965453	94.259	0.43279	94.259	93.963	94.396	0					22	13	2	0	0	0	0.89178	1	39403	39403		0.69038	0.088878	1	1368000	+		22859	13198	11355	11408	26275	26275					0.08615422542084161
NKKNRTKKKP	10	Unmodified	_NKKNRTKKKP_					0	0	0		nc|ENSG00000116690|Q92954-5|PRG4;nc|ENSG00000116690|Q92954-4|PRG4;nc|ENSG00000116690|Q92954-3|PRG4;nc|ENSG00000116690|Q92954-6|PRG4;nc|ENSG00000116690|Q92954-2|PRG4;ENSG00000116690|ENST00000445192|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.9348327517509	3	414.598206	1240.77279	0.90302	0.00037439	-1.149	-0.00047639	-0.24602	-0.000102	414.5976715890155	92.458	0.54696	92.458	92.197	92.744	0					63	17	5	0	0	0	0.89803	2	38570	38570;38726		0.62683	0.39098	1	28313000			22860	1980	11356	11409	26276;26277	26276					0.16203254090919472
NKKNRTKKKP	10	Unmodified	_NKKNRTKKKP_					0	0	0		nc|ENSG00000116690|Q92954-5|PRG4;nc|ENSG00000116690|Q92954-4|PRG4;nc|ENSG00000116690|Q92954-3|PRG4;nc|ENSG00000116690|Q92954-6|PRG4;nc|ENSG00000116690|Q92954-2|PRG4;ENSG00000116690|ENST00000445192|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	nc|ENSG00000116690|Q92954-5|PRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	414.5980407595634	3	414.598206	1240.77279	3.9593	0.0016415	-3.4292	-0.0014217	0.53013	0.00021979	414.59670084319845	91.709	0.45844	92.645	92.372	92.83	0.93623					48	14	4	0	0	0	0.89803	1	38612	38612		0.62683	0.12087	1	9027400			22861	1980	11356	11409	26278	26278					0.16203254090919472
NKKNVVKS	8	Unmodified	_NKKNVVKS_					0	0	0			REV__tr|A0A7D6VT74|A0A7D6VT74_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_06925PE=4SV=1	REV__tr|A0A7D6VT74|A0A7D6VT74_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_06925PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1916381716728	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.601	1	65.545	65.045	66.045	1.9444								0	0	0	1.0178	1	26683	26683		1.3295	0	1		+		22862	15478	11357	11410	26279	26279					0.08901180025713984
NKKNVVKS	8	Unmodified	_NKKNVVKS_					0	0	0			REV__tr|A0A7D6VT74|A0A7D6VT74_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_06925PE=4SV=1	REV__tr|A0A7D6VT74|A0A7D6VT74_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_06925PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913329958916	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.725	1	65.653	65.153	66.153	1.928								0	0	0	1.0178	1	26736	26736		1.3295	0	1		+		22863	15478	11357	11410	26280	26280					0.08901180025713984
NKKPRAAR	8	Unmodified	_NKKPRAAR_					0	0	0		chr1:37495655-37495885|88|14.89|0.28|5.74|-|0|None,MEAF6|1	chr1:37495655-37495885|88|14.89|0.28|5.74|-|0|None,MEAF6|1	chr1:37495655-37495885|88|14.89|0.28|5.74|-|0|None,MEAF6|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1962768435478	3	314.198154	939.572632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.757	1	21.757	21.257	22.257	0								0	0	0	1.0178	1	9048	9048		0.40072	0	1				22864	171	11358	11411	26281	26281					0.100428242139742
NKKPVKSNN	9	Unmodified	_NKKPVKSNN_					0	0	0		ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4	ENSG00000134744|ENST00000257177|TUT4	ENSG00000134744|ENST00000257177|TUT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5343810915947	3	343.533091	1027.57744	0.11295	3.8802E-05	3.2436	0.0011143	3.3566	0.0011531	343.53388698232135	24.469	0.57546	26.154	25.907	26.482	1.6845					42	14	3	0	0	0	0.71526	1	10185	10185		4.1895	0.60244	1	3256400			22865	2632	11359	11412	26282	26282					0.06475663566084222
NKKPVRQK	8	Unmodified	_NKKPVRQK_					0	0	0		ENST00000409603.5_1_7:28530840-28534545:+|nuORF	ENST00000409603.5_1_7:28530840-28534545:+|nuORF	ENST00000409603.5_1_7:28530840-28534545:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	333.2153503298759	3	333.213692	996.619247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.7	1	59.026	58.526	59.526	0.32553								0	0	0	1.0178	1	24601	24601		1.4819	0.41044	1				22866	6381	11360	11413	26283	26283					0.12080264045278
NKKQLGIV	8	Unmodified	_NKKQLGIV_					0	0	0			REV__ENST00000551848.1_1_12:32260938-32261055:+|nuORF	REV__ENST00000551848.1_1_12:32260938-32261055:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	300.5271484255791	3	300.527277	898.560001	0.17756	5.3361E-05	1.4282	0.00042922	1.6058	0.00048258	300.5272518596568	31.206	0.64626	33.03	32.712	33.358	1.8246					49	21	3	0	0	0	0.88587	1	13139	13139		3.5965	1.9439	1	3302000	+		22867	13833	11361	11414	26284	26284					0.10666368031093043
NKKQRRERKQ	10	Unmodified	_NKKQRRERKQ_					0	0	0		L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	458.2635070681572	3	457.607764	1369.80146	3.1748	0.0014528	0.45324	0.00020741	3.6281	0.0016602	457.6077708096414	85.302	1.9751	85.554	84.75	86.725	0.25227					144	63	3	0	0	0	0.12561	1	36165	36165		0.15932	0	1	3020100			22868	7719	11362	11415	26285	26285					0.13135371720068179
NKKQRRERKQ	10	Unmodified	_NKKQRRERKQ_					0	0	0		L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	457.607764	1369.80146	2.625	0.0012012	1.261	0.00057704	3.886	0.0017783	457.6081901152108	85.505	1.3251	85.505	84.653	85.978	0	-0.16852	0.00044762	NaN	0.15932	75	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2794600			22869	7719	11362	11415							0.13135371720068179
NKKQRRERKQ	10	Unmodified	_NKKQRRERKQ_					0	0	0		L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|17|3|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	457.607764	1369.80146	2.1147	0.00096769	1.3659	0.00062504	3.4805	0.0015927	457.60820015574615	84.658	1.1845	85.817	85.149	86.333	1.159	0.14349	0.00059162	NaN	0.15932	86	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2908000			22870	7719	11362	11415							0.13135371720068179
NKKRKRQPKHL	11	Unmodified	_NKKRKRQPKHL_					0	0	0			REV__nc|ENSG00000179397|Q5SY80-3|CATSPERE	REV__nc|ENSG00000179397|Q5SY80-3|CATSPERE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2300598025322	4	358.979747	1431.88988	-1.0728	-0.00038511	0.11323	4.0646E-05	-0.95957	-0.00034447	359.2306034106611	38.905	0.22256	38.905	38.762	38.984	0					12	8	2	0	0	0	1.0402	1	16303	16303		0.08335	0	1	1766300	+		22871	11275	11363	11416	26286	26286					0.19121412030563079
NKKRLLARHER	11	Unmodified	_NKKRLLARHER_					0	0	0		nc|ENSG00000204524|Q5CZA5-2|ZNF805;ENSG00000204524|ENST00000414468|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	nc|ENSG00000204524|Q5CZA5-2|ZNF805	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	356.2793762087822	4	355.970651	1419.8535	0.55803	0.00019864	0.083891	2.9863E-05	0.64192	0.0002285	355.97018996446053	67.079	0.48897	68.467	68.279	68.768	1.3888					23	15	2	0	0	0	0.14606	1	28206	28206		0.08335	0	1	664970			22872	5148	11364	11417	26287	26287					0.1603653513379868
NKKRRLRS	8	Unmodified	_NKKRRLRS_					0	0	0			REV__nc|ENSG00000136717|O00499-10|BIN1	REV__nc|ENSG00000136717|O00499-10|BIN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	353.2283508181572	3	353.228224	1056.66284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.868	1	87.415	86.915	87.915	1.547								0	0	0	1.0178	1	36142	36142		0.40072	0	1		+		22873	14442	11365	11418	26288	26288					0.13677873542405905
NKKRSFLFV	9	Unmodified	_NKKRSFLFV_					0	0	0		tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2297546267509	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.05	1	94.792	94.292	95.292	0.74124								0	0	0	0.42693	1	39574	39574		1.0715	0.10919	1				22874	16505	11366	11419	26289	26289					0.10253703876537656
NKKRSFLFV	9	Unmodified	_NKKRSFLFV_					0	0	0		tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	tr|A0A553SQ79|A0A553SQ79_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2282287478447	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.343	1	95.085	94.585	95.585	0.74124								0	0	0	0.42693	1	39697	39697		1.0715	0.20709	1				22875	16505	11366	11419	26290	26290					0.10253703876537656
NKKRTPLDD	9	Unmodified	_NKKRTPLDD_					0	0	0			REV__SH3PXD2A-RB1|1|fusion	REV__SH3PXD2A-RB1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2539550662041	3	362.86825	1085.58292	1.5167	0.00055037	1.9527	0.00070856	3.4694	0.0012589	362.8701755497233	82.944	0.58833	84.157	83.983	84.572	1.2125					24	18	2	0	0	0	0.11941	1	34948	34948		1.0715	0.3738	1	350820	+		22876	14619	11367	11420	26291	26291					0.043553423578941874
NKKSIIFII	9	Unmodified	_NKKSIIFII_					0	0	0		tr|A0A553STE0|A0A553STE0_NIACINADHdehydrogenasesubunit4OS=NialliacirculansOX=1397GN=CEQ21_04580PE=4SV=1	tr|A0A553STE0|A0A553STE0_NIACINADHdehydrogenasesubunit4OS=NialliacirculansOX=1397GN=CEQ21_04580PE=4SV=1	tr|A0A553STE0|A0A553STE0_NIACINADHdehydrogenasesubunit4OS=NialliacirculansOX=1397GN=CEQ21_04580PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2345458865166	3	359.233982	1074.68012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.965	1	53.965	53.465	54.465	0								0	0	0	0.42693	1	22497	22497		0.23584	0	1				22877	16646	11368	11421	26292	26292					0.14576356304860383
NKKVAKILN	9	Unmodified	_NKKVAKILN_					0	0	0		tr|A0A553SNH4|A0A553SNH4_NIACIDUF134domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24510PE=4SV=1	tr|A0A553SNH4|A0A553SNH4_NIACIDUF134domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24510PE=4SV=1	tr|A0A553SNH4|A0A553SNH4_NIACIDUF134domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24510PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2266418337822	3	343.225598	1026.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.707	1	67.707	67.207	68.207	0								0	0	0	0.42693	1	28200	28200		1.0715	0.10919	1				22878	16421	11369	11422	26293	26293					0.14270301502278926
NKKVFPII	8	Unmodified	_NKKVFPII_					0	0	0		tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2074157595634	3	320.207656	957.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.025	1	62.025	61.525	62.525	0								0	0	0	1.0178	1	25859	25859		0.40072	0	1				22879	16211	11370	11423	26294	26294					0.12064129070574836
NKKVFPII	8	Unmodified	_NKKVFPII_					0	0	0		tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	tr|A0A553SIN3|A0A553SIN3_NIACIPolysaccharidepyruvyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15180PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2073852419853	3	320.207656	957.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.207	1	62.207	61.707	62.707	0								0	0	0	1.0178	1	25935	25935		0.40072	0	1				22880	16211	11370	11423	26295	26295					0.12064129070574836
NKKVKPKIP	9	Unmodified	_NKKVKPKIP_					0	0	0		ENSG00000104213|ENST00000251630|PDGFRL	ENSG00000104213|ENST00000251630|PDGFRL	ENSG00000104213|ENST00000251630|PDGFRL	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2372314333916	3	351.237726	1050.69135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.603	1	96.708	96.208	97.208	0.105								0	0	0	0.42693	1	40424	40424		1.0715	0	1				22881	1452	11371	11424	26296	26296					0.168031783989818
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1779052615166	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.988	1	80.988	80.488	81.488	0								0	0	0	1.0178	1	33724	33724		1.4819	1.0236	1		+		22882	10470	11372	11425	26297	26297					0.03988883409135724
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1786376833916	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.717	1	90.717	90.217	91.217	0								0	0	0	1.0178	1	37916	37916		1.4819	1.0236	1		+		22883	10470	11372	11425	26298	26298					0.03988883409135724
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1786071658134	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.396	1	97.396	96.896	97.896	0								0	0	0	1.0178	1	40719	40719		1.4819	0.51963	1		+		22884	10470	11372	11425	26299	26299					0.03988883409135724
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1785461306572	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.137	1	71.461	70.961	71.961	0.32359								0	0	0	1.0178	1	29775	29775		1.4819	0.70537	1		+		22885	10470	11372	11425	26300	26300					0.03988883409135724
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1786987185478	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.395	1	71.718	71.218	72.218	0.32359								0	0	0	1.0178	1	29879	29879		1.4819	1.0812	1		+		22886	10470	11372	11425	26301	26301					0.03988883409135724
NKKVPQET	8	Unmodified	_NKKVPQET_					0	0	0			REV__ENSG00000154269|ENST00000357639|ENPP3	REV__ENSG00000154269|ENST00000357639|ENPP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1789428591728	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.317	1	97.408	96.908	97.908	0.090881								0	0	0	1.0178	1	40721	40721		1.4819	0.41044	1		+		22887	10470	11372	11425	26302	26302					0.03988883409135724
NKLALKVTKQ	10	Unmodified	_NKLALKVTKQ_					0	0	0			REV__tr|A0A553SGR6|A0A553SGR6_NIACI5-oxoprolinasesubunitAOS=NialliacirculansOX=1397GN=pxpAPE=3SV=1	REV__tr|A0A553SGR6|A0A553SGR6_NIACI5-oxoprolinasesubunitAOS=NialliacirculansOX=1397GN=pxpAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5821105837822	3	381.580041	1141.71829	0.5019	0.00019151	0.35827	0.00013671	0.86017	0.00032823	381.9144688394415	36.919	0.34377	38.737	38.703	39.047	1.8176					21	15	2	0	0	0	0.86348	1	15549	15549		5.4027	0.68679	1	1569700	+		22888	14765	11373	11426	26303	26303					0.15310242219493375
NKLASLIA	8	Unmodified	_NKLASLIA_					0	0	0		tr|A0A553SH03|A0A553SH03_NIACIGlycosyltransferasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_11920PE=4SV=1	tr|A0A553SH03|A0A553SH03_NIACIGlycosyltransferasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_11920PE=4SV=1	tr|A0A553SH03|A0A553SH03_NIACIGlycosyltransferasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_11920PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2636596560478	2	415.260728	828.506903	2.7952	0.0011607	2.6968	0.0011199	5.492	0.0022806	415.2617106276002	85.326	0.65533	85.579	85.196	85.851	0.25227					41	20	3	0	0	0	0.89008	1	35756	35756		2.5775	0	1	2256000			22889	16130	11374	11427	26304	26304					0.08578990248429363
NKLDCFEYAF	10	Unmodified	_NKLDCFEYAF_					0	0	0		ENSG00000166845|ENST00000620105|C18orf54	ENSG00000166845|ENST00000620105|C18orf54	ENSG00000166845|ENST00000620105|C18orf54	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	417.9204894900322	3	417.190113	1248.54851	0.71849	0.00029975	-2.1585	-0.00090052	-1.44	-0.00060077	417.18927450979163	28.406	0.45464	30.181	30.061	30.516	1.7754					29	14	3	0	0	0	0.12556	1	11946	11946		1.9064	0.71303	1	2599900			22890	3924	11375	11428	26305	26305					-0.0658224184521714
NKLEKHKK	8	Unmodified	_NKLEKHKK_					0	0	0		tr|A0A553SQJ9|A0A553SQJ9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07775PE=4SV=1	tr|A0A553SQJ9|A0A553SQJ9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07775PE=4SV=1	tr|A0A553SQJ9|A0A553SQJ9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07775PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.8760864138603	3	342.213581	1023.61891	-1.513	-0.00051778	1.4992	0.00051305	-0.013808	-4.7253E-06	342.54876769045563	40.189	0.63108	40.189	39.732	40.363	0					23	19	2	0	0	0	2.3239	1	16878	16878		5.7319	3.2334	1	667160			22891	16520	11376	11429	26306	26306					0.10804844325411977
NKLESLELC	9	Unmodified	_NKLESLELC_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	nc|ENSG00000070371|P53675-2|CLTCL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1813232302666	3	350.182959	1047.52705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.407	1	45.736	45.236	46.236	0.32899								0	0	0	0.42693	1	19063	19063		2.2828	0	1				22892	851	11377	11430	26307	26307					0.005183731260558488
NKLFLSSGV	9	Unmodified	_NKLFLSSGV_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1862670779228	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.865	1	73.865	73.365	74.365	0								0	0	0	0.42693	1	30759	30759		1.0715	0	1		+		22893	10761	11378	11431	26308	26308					0.05570357931560466
NKLFLSSGV	9	Unmodified	_NKLFLSSGV_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1861450076103	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.6	1	75.6	75.1	76.1	0								0	0	0	0.42693	1	31472	31472		1.0715	0	1		+		22894	10761	11378	11431	26309	26309					0.05570357931560466
NKLFLSSGV	9	Unmodified	_NKLFLSSGV_					0	0	0			REV__ENSG00000165029|ENST00000374736|ABCA1	REV__ENSG00000165029|ENST00000374736|ABCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1862975955009	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.846	1	75.846	75.346	76.346	0								0	0	0	0.42693	1	31572	31572		1.0715	0	1		+		22895	10761	11378	11431	26310	26310					0.05570357931560466
NKLFRKWE	8	Unmodified	_NKLFRKWE_					0	0	0			REV__ENSG00000106688|ENST00000262352|SLC1A1	REV__ENSG00000106688|ENST00000262352|SLC1A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2134582400322	3	374.213581	1119.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.26	1	74.584	74.084	75.084	0.32464								0	0	0	1.0178	1	31062	31062		0.40072	0	1		+		22896	9213	11379	11432	26311	26311					0.06388844325419996
NKLFRKWE	8	Unmodified	_NKLFRKWE_					0	0	0			REV__ENSG00000106688|ENST00000262352|SLC1A1	REV__ENSG00000106688|ENST00000262352|SLC1A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2128478884697	3	374.213581	1119.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.52	1	74.844	74.344	75.344	0.32464								0	0	0	1.0178	1	31169	31169		0.40072	0	1		+		22897	9213	11379	11432	26312	26312					0.06388844325419996
NKLIETHLKAV	11	Unmodified	_NKLIETHLKAV_					0	0	0			REV__tr|A0A7D6ZUQ2|A0A7D6ZUQ2_9CLOTAlpha-1,4glucanphosphorylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01110PE=3SV=1	REV__tr|A0A7D6ZUQ2|A0A7D6ZUQ2_9CLOTAlpha-1,4glucanphosphorylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01110PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5927917361259	3	422.590717	1264.75032	1.7704	0.00074815	3.231	0.0013654	5.0014	0.0021135	422.59194267234966	36.503	0.52721	36.805	36.518	37.045	0.30197					60	37	2	0	0	0	1.0282	1	15286	15286		2.084	0.34169	1	4810300	+		22898	15726	11380	11433	26313	26313					0.12853609902640528
NKLIIFILLF	10	Unmodified	_NKLIIFILLF_					0	0	0		tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	309.1729308962822	4	309.204693	1232.78967	0.88563	0.00027384	3.3293	0.0010294	4.2149	0.0013033	309.4571547520356	38.894	0.84434	40.19	39.943	40.787	1.2961					35	26	2	0	0	0	0.12561	1	16225	16225		0.13989	0.04505	1	2288500			22899	16208	11381	11434	26314	26314					0.18258361924176825
NKLIIFILLF	10	Unmodified	_NKLIIFILLF_					0	0	0		tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5365173220634	4	309.204693	1232.78967	0.072495	2.2416E-05	0.76416	0.00023628	0.83666	0.0002587	309.45637017000644	28.392	0.48627	30.167	30.061	30.548	1.7754					23	15	2	0	0	0	0.1256	1	12014	12014		0.13989	0	1	793010			22900	16208	11381	11434	26315	26315					0.18258361924176825
NKLIIFILLF	10	Unmodified	_NKLIIFILLF_					0	0	0		tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.1727477908134	4	309.204693	1232.78967	0.089389	2.764E-05	3.4298	0.0010605	3.5192	0.0010882	309.45723919661674	37.419	0.85537	39.239	39.023	39.879	1.8202					42	30	2	0	0	0	0.12561	1	15952	15952		0.13989	0.056541	1	1395500			22901	16208	11381	11434	26316	26316					0.18258361924176825
NKLIIFILLF	10	Unmodified	_NKLIIFILLF_					0	0	0		tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	tr|A0A553SIL6|A0A553SIL6_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_15055PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	309.204693	1232.78967	0.58028	0.00017942	1.8605	0.00057528	2.4408	0.00075471	309.4570737163357	38.514	0.76579	40.351	40.209	40.975	1.8366	0.080337	-0.0012063	NaN	0.13989	38	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	832410			22902	16208	11381	11434							0.18258361924176825
NKLIKIAVI	9	Unmodified	_NKLIKIAVI_					0	0	0			REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	REV__nc|ENSG00000163349|Q86Z02-2|HIPK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.3416931033134	3	337.902344	1010.6852	1.8973	0.00064111	-4.0738	-0.0013765	-2.1765	-0.00073544	338.23695719987364	117.69	0.6744	117.9	117.47	118.15	0.21096					26	20	2	0	0	0	0.11954	1	50924	50924		0	0	1	393000	+		22903	10681	11382	11435	26317	26317					0.18028660167453836
NKLILILL	8	Unmodified	_NKLILILL_					0	0	0			REV__ENST00000428423.5_1_7:72469630-72470067:-|nuORF	REV__ENST00000428423.5_1_7:72469630-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	470.3340942263603	2	470.333696	938.652839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.658	1	94.803	94.303	95.303	0.14493								0	0	0	1.0178	1	39615	39615		0.69038	0	1		+		22904	8689	11383	11436	26318	26318					0.18105872764476771
NKLIRRYK	8	Unmodified	_NKLIRRYK_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MSMS	GG20161007_CRH_Patient100_A02_01	1	364.2331725955009	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.428	1	72.428	71.928	72.928	0								0	0	0	1.0178	1	30158	30158		0.40072	0	1				22905	2718;1028	11384	11437	26319	26319					0.13584525970691175
NKLIRRYK	8	Unmodified	_NKLIRRYK_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1;nc|ENSG00000082153|Q7L1Q6-2|BZW1;ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	ENSG00000082153|ENST00000409600|BZW1;ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MSMS	GG20161007_CRH_Patient100_A02_01	1	364.2335998415947	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.659	1	76.659	76.159	77.159	0								0	0	0	1.0178	1	31914	31914		0.40072	0	1				22906	2718;1028	11384	11437	26320	26320					0.13584525970691175
NKLIVLVQFL	10	Unmodified	_NKLIVLVQFL_					0	0	0			REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2588683962822	3	396.256787	1185.74853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.881	1	62.211	61.711	62.711	0.32974								0	0	0	0.66151	1	25927	25927		1.9064	0.69154	1		+		22907	8450	11385	11438	26321	26321					0.16308600884713087
NKLKALNV	8	Unmodified	_NKLKALNV_					0	0	0			REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	300.5272094607353	3	300.527277	898.560001	0.59089	0.00017758	-0.22031	-6.6208E-05	0.37058	0.00011137	300.5271333870663	32.904	0.68605	33.199	32.897	33.583	0.29431					42	23	2	0	0	0	0.87935	1	13852	13852		6.7232	0	1	4322000	+		22908	14872	11386	11439	26322	26322					0.10666368031081674
NKLKALNV	8	Unmodified	_NKLKALNV_					0	0	0			REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	300.527277	898.560001	0.59089	0.00017758	-0.22031	-6.6208E-05	0.37058	0.00011137	300.5271333870663	32.904	0.68605	33.199	32.897	33.583	0.29431	0.054413	-0.0011691	NaN	6.7232	42	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4322000	+		22909	14872	11386	11439							0.10666368031081674
NKLKALNV	8	Unmodified	_NKLKALNV_					0	0	0			REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	300.527277	898.560001	-0.60612	-0.00018215	1.9711	0.00059236	1.3649	0.0004102	300.5273446588968	31.923	0.58473	33.204	32.803	33.388	1.2813	0.059771	0.00080661	NaN	6.7232	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3515900	+		22910	14872	11386	11439							0.10666368031081674
NKLKALNV	8	Unmodified	_NKLKALNV_					0	0	0			REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	300.527277	898.560001	0.17756	5.3361E-05	1.4282	0.00042922	1.6058	0.00048258	300.5272518596568	31.206	0.64626	33.03	32.712	33.358	1.8246	-0.11418	0.00031719	NaN	6.7232	49	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3302000	+		22911	14872	11386	11439							0.10666368031081674
NKLKALNVGN	10	Unmodified	_NKLKALNVGN_					0	0	0			REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	REV__tr|A0A553SIX7|A0A553SIX7_NIACICelldivisionATP-bindingproteinFtsEOS=NialliacirculansOX=1397GN=ftsEPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	357.2144042849541	3	357.548741	1069.62439	1.2417	0.00044395	3.6809	0.0013161	4.9226	0.0017601	357.5498077433933	37.506	0.36817	37.811	37.626	37.994	0.30497					17	13	2	0	0	0	0.12529	1	15827	15827		1.5923	0.48253	1	614650	+		22912	14872	11387	11440	26323	26323					0.09236523117237994
NKLKLAEFI	9	Unmodified	_NKLKLAEFI_					0	0	0		tr|A0A7D6VP12|A0A7D6VP12_9CLOTGTPaseHflXOS=ClostridiumintestinaleOX=36845GN=hflXPE=3SV=1	tr|A0A7D6VP12|A0A7D6VP12_9CLOTGTPaseHflXOS=ClostridiumintestinaleOX=36845GN=hflXPE=3SV=1	tr|A0A7D6VP12|A0A7D6VP12_9CLOTGTPaseHflXOS=ClostridiumintestinaleOX=36845GN=hflXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2210265994072	3	359.221853	1074.64373	-0.064562	-2.3192E-05	-2.5304	-0.00090897	-2.5949	-0.00093216	359.22100145004833	86.206	0.4492	86.206	85.978	86.427	0					39	14	3	0	0	0	0.8462	1	35923	35923		1.0715	0	1	14343000			22913	16751	11388	11441	26324	26324					0.1093947940810267
NKLKLAYD	8	Unmodified	_NKLKLAYD_					0	0	0			REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1866027712822	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.16	1	50.489	49.989	50.989	0.32885								0	0	0	1.0178	1	21015	21015		1.6526	1.1943	1		+		22914	9204	11389	11442	26325	26325					0.05570357931537728
NKLKLAYD	8	Unmodified	_NKLKLAYD_					0	0	0			REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1860229372978	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.023	1	51.351	50.851	51.851	0.32824								0	0	0	1.0178	1	21375	21375		1.4819	0	1		+		22915	9204	11389	11442	26326	26326					0.05570357931537728
NKLKLAYD	8	Unmodified	_NKLKLAYD_					0	0	0			REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1864807009697	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.904	1	68.227	67.727	68.727	0.32269								0	0	0	1.0178	1	28427	28427		1.6526	0.17072	1		+		22916	9204	11389	11442	26327	26327					0.05570357931537728
NKLKLAYD	8	Unmodified	_NKLKLAYD_					0	0	0			REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	REV__ENST00000487288.1_1_7:99711182-99711832:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	322.1862365603447	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.965	1	51.356	50.856	51.856	1.3911								0	0	0	1.0178	1	20916	20916		1.6526	1.1943	1		+		22917	9204	11389	11442	26328	26328					0.05570357931537728
NKLKLLIL	8	Unmodified	_NKLKLLIL_					0	0	0			REV__nc|ENSG00000179057|Q8N9C0|IGSF22	REV__nc|ENSG00000179057|Q8N9C0|IGSF22	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.1229736208916	3	318.895189	953.663738	1.2778	0.00040748	-2.124	-0.00067735	-0.84626	-0.00026987	318.8946290763677	43.037	0.27025	44.958	44.811	45.081	1.9211					13	8	2	0	0	0	2.3239	1	17999	17999		0.40072	0	1	1061200	+		22918	11268	11390	11443	26329	26329					0.1850527513875022
NKLKLLIL	8	Unmodified	_NKLKLLIL_					0	0	0			REV__nc|ENSG00000179057|Q8N9C0|IGSF22	REV__nc|ENSG00000179057|Q8N9C0|IGSF22	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	318.895189	953.663738	0.75218	0.00023987	0.078931	2.5171E-05	0.83111	0.00026504	318.8951483843852	43.732	0.24566	45.086	44.918	45.163	1.3536	0.063568	0.0010461	NaN	0.40072	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1425200	+		22919	11268	11390	11443							0.1850527513875022
NKLKLWLL	8	Unmodified	_NKLKLWLL_					0	0	0		tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	tr|A0A7D6VNA1|A0A7D6VNA1_9CLOTAmidohydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18100PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2255126833916	3	343.226939	1026.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.989	1	59.989	59.489	60.489	0								0	0	0	1.0178	1	25012	25012		0.40072	0	1				22920	16727	11391	11444	26330	26330					0.14672390995974638
NKLKPTGVW	9	Unmodified	_NKLKPTGVW_					0	0	0			REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2067748904228	3	348.206315	1041.59712	0.8385	0.00029197	0.81089	0.00028236	1.6494	0.00057433	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.77025	1	13422	13422		4.5289	0	1	7322900	+		22921	15054	11392	11445	26331	26331					0.0779803957684635
NKLKPTGVW	9	Unmodified	_NKLKPTGVW_					0	0	0			REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2062560915947	3	348.206315	1041.59712	0.87665	0.00030525	0.3206	0.00011164	1.1972	0.00041689	348.20609772626096	32.614	1.3218	32.908	32.59	33.912	0.29431					80	44	3	0	0	0	0.82114	1	13605	13605		2.4985	0	1	7365600	+		22922	15054	11392	11445	26332	26332					0.0779803957684635
NKLKPTGVW	9	Unmodified	_NKLKPTGVW_					0	0	0			REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2062560915947	3	348.206315	1041.59712	-0.5665	-0.00019726	1.8504	0.00064432	1.2839	0.00044706	348.2068075331765	31.488	0.9053	32.769	32.375	33.28	1.2813					65	29	3	0	0	0	0.82114	1	13123	13123		2.4985	0	1	6541500	+		22923	15054	11392	11445	26333	26333					0.0779803957684635
NKLKPTGVW	9	Unmodified	_NKLKPTGVW_					0	0	0			REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	REV__tr|A0A553STH7|A0A553STH7_NIACIPeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04970PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2061340212822	3	348.206315	1041.59712	0.35938	0.00012514	-0.99481	-0.0003464	-0.63543	-0.00022126	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.77025	1	12648	12648		4.5289	0	1	7605500	+		22924	15054	11392	11445	26334	26334					0.0779803957684635
NKLKRLYYI	9	Unmodified	_NKLKRLYYI_					0	0	0			REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2488281130791	4	303.438121	1209.72338	1.0714	0.00032511	1.3574	0.0004119	2.4289	0.00073701	303.68931590134264	45.396	0.37197	45.725	45.585	45.957	0.32899					19	12	2	0	0	0	0.11955	1	19021	19021		0.23584	0.076522	1	563670	+		22925	15550	11393	11446	26335	26335					0.12690546082126275
NKLKRLYYI	9	Unmodified	_NKLKRLYYI_					0	0	0			REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2483398318291	4	303.438121	1209.72338	0.92908	0.00028192	2.6021	0.00078958	3.5312	0.0010715	303.4386617836725	44.01	0.31025	45.363	45.191	45.502	1.3536					24	9	4	0	0	0	0.11955	1	18442	18442		0.23584	0.076522	1	781550	+		22926	15550	11393	11446	26336	26336					0.12690546082126275
NKLKRLYYI	9	Unmodified	_NKLKRLYYI_					0	0	0			REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2484619021416	4	303.438121	1209.72338	1.0803	0.0003278	1.968	0.00059717	3.0483	0.00092497	303.4385720444752	41.825	0.6311	43.718	43.413	44.044	1.8927					49	19	3	0	0	0	0.11955	1	17577	17577		0.23584	0.076522	1	1551700	+		22927	15550	11393	11446	26337	26337					0.12690546082126275
NKLKRLYYI	9	Unmodified	_NKLKRLYYI_					0	0	0			REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483703494072	4	303.438121	1209.72338	0.39265	0.00011915	1.8853	0.00057207	2.278	0.00069122	303.43856165695775	38.388	0.28312	40.224	40.02	40.304	1.8366					14	8	2	0	0	0	0.11941	1	16033	16033		0.23584	0.095952	1	458270	+		22928	15550	11393	11446	26338	26338					0.12690546082126275
NKLKRLYYI	9	Unmodified	_NKLKRLYYI_					0	0	0			REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	REV__tr|A0A7D6VXP0|A0A7D6VXP0_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09465PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	303.438121	1209.72338	0.55998	0.00016992	2.8882	0.00087639	3.4482	0.0010463	303.4388469426404	42.403	0.7579	43.743	43.413	44.17	1.3399	0.012626	0.00053337	NaN	0.23584	61	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1404600	+		22929	15550	11393	11446							0.12690546082126275
NKLKTDKGK	9	Unmodified	_NKLKTDKGK_					0	0	0			REV__ENST00000464394.5_3_14:74486142-74495896:+|nuORF	REV__ENST00000464394.5_3_14:74486142-74495896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	344.5455200076103	3	344.545108	1030.61349	-0.7767	-0.00026761	0.88782	0.00030589	0.11112	3.8286E-05	344.54559304383145	84	0.3344	84	83.752	84.086	0					23	10	3	0	0	0	0.7849	1	35004	35004		2.2828	0.69049	1	1176600	+		22930	13224	11394	11447	26339	26339					0.09941120742928433
NKLKTKMYL	9	Unmodified	_NKLKTKMYL_					0	0	0		ENSG00000125686|ENST00000300651|MED1;nc|ENSG00000125686|Q15648-3|MED1	ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2291747927666	3	380.22661	1137.658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.079	1	88.079	87.579	88.579	0								0	0	0	0.42693	1	36820	36820		1.0715	0.50829	1				22931	2271	11395	11448	26340	26340					0.09467808564795632
NKLKTQILVQK	11	Unmodified	_NKLKTQILVQK_					0	0	0		tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2822448611259	3	438.281883	1311.82382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.139	1	65.139	64.639	65.639	0								0	0	0	0.63775	1	27147	27147		1.1098	0.48293	1				22932	17204	11396	11449	26341	26341					0.18038158345120792
NKLKTQYCW	9	Unmodified	_NKLKTQYCW_					0	0	0			REV__ENST00000523561.1_1_8:99044328-99047937:+|nuORF	REV__ENST00000523561.1_1_8:99044328-99047937:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	394.5859557986259	3	395.202465	1182.58556	2.1232	0.00083909	2.2392	0.00088492	4.3624	0.001724	395.53633682161825	61.221	0.12561	61.551	61.484	61.61	0.32974					5	3	2	0	0	0	0.11916	1	25664	25664		2.2828	0.5405	1	295770	+		22933	13643	11397	11450	26342	26342					0.0015747449119771773
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2164794802666	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.347	1	62.347	61.847	62.847	0								0	0	0	0.42693	1	25993	25993		1.0715	0	1		+		22934	11081	11398	11451	26343	26343					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2174255251884	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.235	1	71.235	70.735	71.735	0								0	0	0	0.42693	1	29667	29667		1.0715	0	1		+		22935	11081	11398	11451	26344	26344					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2162353396416	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.12	1	46.449	45.949	46.949	0.32899								0	0	0	0.42693	1	19355	19355		1.0715	0	1		+		22936	11081	11398	11451	26345	26345					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2177307009697	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.525	1	46.856	46.356	47.356	0.33002								0	0	0	0.42693	1	19521	19521		1.0715	0	1		+		22937	11081	11398	11451	26346	26346					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2190429568291	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.634	1	94.779	94.279	95.279	0.14493								0	0	0	0.42693	1	39605	39605		1.0715	0	1		+		22938	11081	11398	11451	26347	26347					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2178222537041	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.784	1	94.907	94.407	95.407	0.12331								0	0	0	0.42693	1	39665	39665		1.0715	0	1		+		22939	11081	11398	11451	26348	26348					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2168456912041	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.007	1	46.373	45.873	46.873	1.3653								0	0	0	0.42693	1	18863	18863		1.0715	0	1		+		22940	11081	11398	11451	26349	26349					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2177307009697	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.122	1	46.488	45.988	46.988	1.3653								0	0	0	0.42693	1	18909	18909		1.0715	0	1		+		22941	11081	11398	11451	26350	26350					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2168151736259	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.429	1	47.804	47.304	48.304	1.3751								0	0	0	0.42693	1	19447	19447		1.0715	0	1		+		22942	11081	11398	11451	26351	26351					0.1274807703384795
NKLLLAIID	9	Unmodified	_NKLLLAIID_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2178527712822	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.778	1	46.737	46.237	47.237	1.9596								0	0	0	0.42693	1	18765	18765		1.0715	0	1		+		22943	11081	11398	11451	26352	26352					0.1274807703384795
NKLMIMHW	8	Unmodified	_NKLMIMHW_					0	0	0		ENSG00000172465|ENST00000372625|TCEAL1	ENSG00000172465|ENST00000372625|TCEAL1	ENSG00000172465|ENST00000372625|TCEAL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	358.2361022830009	3	358.185869	1071.53578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.537	1	48.867	48.367	49.367	0.33034								0	0	0	1.0178	1	20349	20349		0.40072	0	1				22944	4237	11399	11452	26353	26353					0.0028706828154554387
NKLNFRLRT	9	Unmodified	_NKLNFRLRT_					0	0	0			REV__tr|A0A553STF0|A0A553STF0_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_04925PE=4SV=1	REV__tr|A0A553STF0|A0A553STF0_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_04925PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1285583376884	3	387.899885	1160.67783	0.68866	0.00026713	0.74407	0.00028862	1.4327	0.00055575	388.2345844390132	87.525	0.89543	87.525	87.378	88.274	0					44	29	2	0	0	0	0.11946	1	36632	36632		0.18151	0	1	1493800	+		22945	15239	11400	11453	26354	26354					0.10391320619714861
NKLPKSVLRR	10	Unmodified	_NKLPKSVLRR_					0	0	0		TPR|p.Q22Lfs*20|1|0.09|ENSG00000047410|chr1:186374964-186374965|-/ACGAA|frameshift_variant	TPR|p.Q22Lfs*20|1|0.09|ENSG00000047410|chr1:186374964-186374965|-/ACGAA|frameshift_variant	TPR|p.Q22Lfs*20|1|0.09|ENSG00000047410|chr1:186374964-186374965|-/ACGAA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	303.1987487673759	4	303.44902	1209.76697	0.15421	4.6796E-05	1.1956	0.0003628	1.3498	0.0004096	303.44938377436426	32.712	0.32851	34.537	34.303	34.631	1.8246					24	15	2	0	0	0	0.12557	1	13661	13661		0.62683	0	1	3269100			22946	16034	11401	11454	26355	26355					0.17048155579254853
NKLPLKMLL	9	Unmodified	_NKLPLKMLL_					0	0	0			REV__ENST00000342435.8_1_3:146233569-146233638:-|nuORF	REV__ENST00000342435.8_1_3:146233569-146233638:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	357.2829772830009	3	357.231584	1068.67292	0.74319	0.00026549	-1.0633	-0.00037984	-0.32011	-0.00011435	357.2316298594172	28.325	0.73477	28.596	28.119	28.853	0.27119					53	23	3	0	0	0	0.11948	1	11945	11945		0	0	1	1858500	+		22947	12503	11402	11455	26356	26356					0.141333004327862
NKLPLKMLL	9	Unmodified	_NKLPLKMLL_					0	0	0			REV__ENST00000342435.8_1_3:146233569-146233638:-|nuORF	REV__ENST00000342435.8_1_3:146233569-146233638:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	357.231584	1068.67292	-0.10494	-3.7488E-05	-1.938	-0.00069232	-2.043	-0.00072981	357.2312886812795	27.14	0.35294	28.411	28.264	28.617	1.2715	-0.017406	-0.00073447	NaN	0	31	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2939200	+		22948	12503	11402	11455							0.141333004327862
NKLQALQE	8	Unmodified	_NKLQALQE_					0	0	0		ENST00000282964.5_1_21:21112145-21112373:+|nuORF;ENST00000495198.6_1_5:64023893-64064425:-|nuORF;ENSG00000153006|ENST00000513458|SREK1IP1	ENST00000282964.5_1_21:21112145-21112373:+|nuORF	ENST00000282964.5_1_21:21112145-21112373:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1780883669853	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.703	1	80.994	80.494	81.494	0.29056								0	0	0	1.0178	1	33738	33738		0.40072	0	1				22949	5706	11403	11456	26357	26357					0.03988883409124355
NKLQQIINRV	10	Unmodified	_NKLQQIINRV_					0	0	0			REV__ENST00000512908.2_1_5:70398727-70422449:-|nuORF	REV__ENST00000512908.2_1_5:70398727-70422449:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	307.1161682009697	4	307.18984	1224.73025	0.59995	0.0001843	-0.78348	-0.00024068	-0.18353	-5.6377E-05	307.1898686616411	33.162	0.34199	33.457	33.209	33.551	0.29431					19	11	2	0	0	0	0.1256	1	13888	13888		0.69767	0.24315	1	547660	+		22950	11945	11404	11457	26358	26358					0.12687858962704013
NKLRGLPL	8	Unmodified	_NKLRGLPL_					0	0	0		AADAC|p.F378Sfs*10|1|0.09|ENSG00000114771|chr3:151828103-151828104|-/AGTGATCTATCAGTGG|frameshift_variant;ENSG00000114771|ENST00000232892|AADAC	AADAC|p.F378Sfs*10|1|0.09|ENSG00000114771|chr3:151828103-151828104|-/AGTGATCTATCAGTGG|frameshift_variant	AADAC|p.F378Sfs*10|1|0.09|ENSG00000114771|chr3:151828103-151828104|-/AGTGATCTATCAGTGG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2484924197197	3	304.199272	909.575986	0.93319	0.00028387	1.6573	0.00050414	2.5905	0.00078801	304.1994045968913	39.313	0.18295	39.626	39.459	39.642	0.31263					8	5	2	0	0	0	2.3239	1	16475	16475		0	0	1	509240			22951	1	11405	11458	26359	26359					0.11758074267993379
NKLRILLRI	9	Unmodified	_NKLRILLRI_					0	0	0		tr|A0A7D6VTT6|A0A7D6VTT6_9CLOTExopolyphosphataseOS=ClostridiumintestinaleOX=36845GN=ppxPE=3SV=1	tr|A0A7D6VTT6|A0A7D6VTT6_9CLOTExopolyphosphataseOS=ClostridiumintestinaleOX=36845GN=ppxPE=3SV=1	tr|A0A7D6VTT6|A0A7D6VTT6_9CLOTExopolyphosphataseOS=ClostridiumintestinaleOX=36845GN=ppxPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2638427615166	3	380.264276	1137.771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.597	1	87.144	86.644	87.644	1.547								0	0	0	0.42693	1	35992	35992		0.23584	0	1				22952	16928	11406	11459	26360	26360					0.20762245072978658
NKLRLLKL	8	Unmodified	_NKLRLLKL_					0	0	0		tr|A0A7D6ZGT2|A0A7D6ZGT2_9CLOTNucleoidocclusionproteinOS=ClostridiumintestinaleOX=36845GN=nocPE=3SV=1;tr|A0A553SHN4|A0A553SHN4_NIACINucleoidocclusionproteinOS=NialliacirculansOX=1397GN=nocPE=3SV=1	tr|A0A7D6ZGT2|A0A7D6ZGT2_9CLOTNucleoidocclusionproteinOS=ClostridiumintestinaleOX=36845GN=nocPE=3SV=1	tr|A0A7D6ZGT2|A0A7D6ZGT2_9CLOTNucleoidocclusionproteinOS=ClostridiumintestinaleOX=36845GN=nocPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3494140505791	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.482	1	96.587	96.087	97.087	0.105								0	0	0	1.0178	1	40372	40372		0.69038	0	1				22953	16163	11407	11460	26361	26361					0.18231195744544948
NKLRLRAR	8	Unmodified	_NKLRLRAR_					0	0	0			REV__AluYa5_dup3276|chr15:62954529-62954829:-|1.460959228836558|0.0385567960020461|5.24|429.0|12|3|sense	REV__AluYa5_dup3276|chr15:62954529-62954829:-|1.460959228836558|0.0385567960020461|5.24|429.0|12|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2263366580009	3	342.892953	1025.65703	-1.0852	-0.00037211	-1.2737	-0.00043673	-2.3589	-0.00080885	343.2259571549327	62.875	0.9379	62.875	62.522	63.46	0					33	29	2	0	0	0	0.89156	1	26329	26329		1.4819	0.28856	1	502760	+		22954	8123	11408	11461	26362	26362					0.1452277503071855
NKLRQTFVR	9	Unmodified	_NKLRQTFVR_					0	0	0		ENSG00000121314|ENST00000240615|TAS2R8;TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	ENSG00000121314|ENST00000240615|TAS2R8;TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1310607790947	3	387.899885	1160.67783	2.5797	0.0010007	-1.623	-0.00062957	0.95673	0.00037112	387.8995112004039	87.683	1.1112	87.918	87.549	88.661	0.2347					53	35	2	0	0	0	0.11941	1	36966	36966		0.23584	0.054336	1	668030			22955	2133;16019	11409	11462	26363	26363					0.10391320619737598
NKLRQTFVRML	11	Unmodified	_NKLRQTFVRML_					0	0	0		ENSG00000121314|ENST00000240615|TAS2R8	ENSG00000121314|ENST00000240615|TAS2R8	ENSG00000121314|ENST00000240615|TAS2R8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	468.9599792361259	3	469.274734	1404.80237	1.9041	0.00089355	0.94486	0.0004434	2.849	0.0013369	469.27541922856045	97.272	0.12393	97.272	97.197	97.321	0					8	3	3	0	0	0	0.14606	1	40637	40637		0.45452	0.046251	1	2568500			22956	2133	11410	11463	26364	26364					0.1161645004476668
NKLRRNGL	8	Unmodified	_NKLRRNGL_					0	0	0		ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2021362185478	3	324.201675	969.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.319	1	36.621	36.121	37.121	0.30197								0	0	0	1.0178	1	15272	15272		1.4819	0	1				22957	4269	11411	11464	26365	26365					0.09718806868420415
NKLRRNGL	8	Unmodified	_NKLRRNGL_					0	0	0		ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	ENSG00000173156|ENST00000308831|RHOD	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2010986208916	3	324.201675	969.583196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.445	1	38.729	38.229	39.229	1.284								0	0	0	1.0178	1	15719	15719		1.4819	0	1				22958	4269	11411	11464	26366	26366					0.09718806868420415
NKLTASIL	8	Unmodified	_NKLTASIL_					0	0	0			REV__nc|ENSG00000154358|Q5VST9|OBSCN	REV__nc|ENSG00000154358|Q5VST9|OBSCN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.2648803591728	2	430.26601	858.517468	1.006	0.00043285	-2.6411	-0.0011364	-1.6351	-0.00070351	430.26480921746594	71.908	0.47409	71.908	71.668	72.142	0					37	14	4	0	0	0	0.88791	1	29907	29907		3.9444	0	1	12371000	+		22959	10474	11412	11465	26367	26367					0.08254972902852842
NKLTKELARAR	11	Unmodified	_NKLTKELARAR_					0	0	0			REV__tr|A0A7D6VTF3|A0A7D6VTF3_9CLOTGlycylradicalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20705PE=4SV=1	REV__tr|A0A7D6VTF3|A0A7D6VTF3_9CLOTGlycylradicalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.9359924197197	3	433.933366	1298.77827	3.1008	0.0013455	2.7049	0.0011737	5.8057	0.0025193	433.93414146336534	95.526	0.23431	95.649	95.537	95.772	0.12331					13	7	2	0	0	0	1.0174	1	39979	39979		1.1098	0	1	1548300	+		22960	15485	11413	11466	26368	26368					0.14082932882729438
NKLTKGGR	8	Unmodified	_NKLTKGGR_					0	0	0		tr|A0A553STM6|A0A553STM6_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05440PE=3SV=1	tr|A0A553STM6|A0A553STM6_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05440PE=3SV=1	tr|A0A553STM6|A0A553STM6_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05440PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2686035037041	2	437.266876	872.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.158	1	41.474	40.974	41.974	0.31683								0	0	0	1.0178	1	17293	17293		7.2892	2.0586	1				22961	16661	11414	11467	26369	26369					0.07784026711476599
NKLVAGYMDRG	11	Unmodified	_NKLVAGYMDRG_					0	0	0		tr|A0A7D6ZE88|A0A7D6ZE88_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_12700PE=4SV=1	tr|A0A7D6ZE88|A0A7D6ZE88_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_12700PE=4SV=1	tr|A0A7D6ZE88|A0A7D6ZE88_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_12700PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5443298220634	3	408.54489	1222.61284	-0.72954	-0.00029805	-0.82413	-0.00033669	-1.5537	-0.00063474	408.5446707320336	14.024	1.3925	14.024	13.887	15.28	0					98	44	4	0	0	0	0.98155	1	6019	6019		2.2527	0.16876	1	17343000			22962	17050	11415	11468	26370	26370					0.01043958031573311
NKLVIIYGS	9	Unmodified	_NKLVIIYGS_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2014648318291	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.761	1	38.066	37.566	38.566	0.30497								0	0	0	0.42693	1	15883	15883		1.0715	0.10919	1		+		22963	15426	11416	11469	26371	26371					0.08331217482702868
NKLVIIYGS	9	Unmodified	_NKLVIIYGS_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2024108767509	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.998	1	54.319	53.819	54.819	0.32088								0	0	0	0.42693	1	22617	22617		1.0715	0.61312	1		+		22964	15426	11416	11469	26372	26372					0.08331217482702868
NKLVIIYGS	9	Unmodified	_NKLVIIYGS_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2023498415947	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.467	1	57.79	57.29	58.29	0.32298								0	0	0	0.42693	1	24097	24097		1.0715	0.56551	1		+		22965	15426	11416	11469	26373	26373					0.08331217482702868
NKLVIIYGS	9	Unmodified	_NKLVIIYGS_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2021972537041	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.799	1	60.127	59.627	60.627	0.32809								0	0	0	0.42693	1	25057	25057		1.0715	0.61312	1		+		22966	15426	11416	11469	26374	26374					0.08331217482702868
NKLVILLIEP	10	Unmodified	_NKLVILLIEP_					0	0	0			REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1537658572197	3	384.584792	1150.73255	-0.72735	-0.00027973	-2.5443	-0.00097849	-3.2716	-0.0012582	384.58399971329425	29.363	0.70786	29.363	29.055	29.763	0					31	22	2	0	0	0	0.1256	1	12404	12404		0.13989	0	1	511560	+		22967	9053	11417	11470	26375	26375					0.16320894647810746
NKLVNLFLRLS	11	Unmodified	_NKLVNLFLRLS_					0	0	0			REV__ENST00000470773.1_1_2:172182447-172182657:-|nuORF	REV__ENST00000470773.1_1_2:172182447-172182657:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	439.6080810427666	3	439.606478	1315.79761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.417	1	81.707	81.207	82.207	0.29056								0	0	0	0.63775	1	34040	34040		0.45452	0.29519	1		+		22968	13279	11418	11471	26376	26376					0.15233889173646276
NKLVTITKFFL	11	Unmodified	_NKLVTITKFFL_					0	0	0		tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.7072936892509	4	331.706329	1322.79621	1.1808	0.00039168	0.10042	3.3309E-05	1.2812	0.00042498	331.706577383154	41.912	0.93774	43.824	43.375	44.313	1.9122					96	29	4	0	0	0	1.0224	1	17545	17545		2.4348	0.35082	1	5423400			22969	16956	11419	11472	26377	26377					0.1477225508488118
NKLWLLLVTL	10	Unmodified	_NKLWLLLVTL_					0	0	0		nc|ENSG00000197565|Q14031|COL4A6;ENST00000477085.1_1_X:107512310-107682601:-|nuORF	nc|ENSG00000197565|Q14031|COL4A6	nc|ENSG00000197565|Q14031|COL4A6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	303.9701110720634	4	303.948322	1211.76418	1.4019	0.00042609	0.83314	0.00025323	2.235	0.00067933	303.94933801506187	55.504	0.61923	55.825	55.548	56.167	0.32088					31	19	2	0	0	0	0.12557	1	23212	23212		0.56317	0.47982	1	1429500			22970	7966	11420	11473	26378	26378					0.16676887401763452
NKMDKLIEIL	10	Unmodified	_NKMDKLIEIL_					0	0	0		ENST00000587860.1_1_18:46287547-46385927:+|nuORF;ENSG00000134030|ENST00000256413|CTIF;nc|ENSG00000134030|O43310-2|CTIF	ENST00000587860.1_1_18:46287547-46385927:+|nuORF	ENST00000587860.1_1_18:46287547-46385927:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2487670779228	4	304.9297	1215.68969	-2.0057	-0.0006116	3.8351	0.0011694	1.8294	0.00055784	305.18082636812096	59.048	0.47251	59.048	58.689	59.161	0					20	14	2	0	0	0	0.1256	1	24619	24619		0.13989	0	1	184040			22971	2590	11421	11474	26379	26379					0.09047756528048012
NKMHSFWY	8	Unmodified	_NKMHSFWY_					0	0	0			REV__ENST00000523861.1_1_8:120584407-120592491:-|nuORF	REV__ENST00000523861.1_1_8:120584407-120592491:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1018554568291	3	371.504255	1111.49094	2.9448	0.001094	-0.44042	-0.00016362	2.5044	0.0009304	371.5040107549405	92.487	0.16217	93.814	93.699	93.861	1.3269					6	4	2	0	0	0	2.3239	1	38904	38904		0.40072	0.40072	1	187000	+		22972	13646	11422	11475	26380	26380					-0.0603503926013218
NKMLFQVPEAN	11	Unmodified	_NKMLFQVPEAN_					0	0	0		tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.914	1	38.219	37.719	38.719	0.30497								0	0	0	0.63775	1	15948	15948		0.45452	0.1855	1				22973	16889	11423	11476	26381	26381					0.010571113458354375
NKMLRLERKR	10	Unmodified	_NKMLRLERKR_					0	0	0			REV__nc|ENSG00000095794|Q03060-23|CREM	REV__nc|ENSG00000095794|Q03060-23|CREM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.6087219119072	3	448.606595	1342.79796	2.8047	0.0012582	2.3495	0.001054	5.1542	0.0023122	448.607348012157	82.959	0.39732	83.229	82.97	83.368	0.27029					22	12	2	0	0	0	0.89803	1	34699	34699		0.13989	0.017027	1	1995400	+		22974	8934	11424	11477	26382	26382					0.14026985621831045
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8893920779228	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.088	1	58.088	57.588	58.588	0								0	0	0	0.66222	1	24235	24235		0.69767	0.19171	1				22975	2259	11425	11478	26383	26383					0.007887007315275696
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.489	1	68.489	67.989	68.989	0								0	0	0	0.66222	1	28522	28522		0.69767	0.19171	1				22976	2259	11425	11478	26384	26384					0.007887007315275696
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882934451103	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.134	1	56.455	55.955	56.955	0.32088								0	0	0	0.66222	1	23518	23518		0.69767	0	1				22977	2259	11425	11478	26385	26385					0.007887007315275696
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8898498415947	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.306	1	60.634	60.134	61.134	0.32809								0	0	0	0.66222	1	25272	25272		0.69767	0.07084	1				22978	2259	11425	11478	26386	26386					0.007887007315275696
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8890258669853	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.406	1	64.735	64.235	65.235	0.32899								0	0	0	0.66222	1	26979	26979		0.69767	0	1				22979	2259	11425	11478	26387	26387					0.007887007315275696
NKNCRRHSLY	10	Unmodified	_NKNCRRHSLY_					0	0	0		ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886596560478	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.716	1	58.13	57.63	58.63	1.4145								0	0	0	0.66222	1	23770	23770		0.69767	0	1				22980	2259	11425	11478	26388	26388					0.007887007315275696
NKNGKPKRQQR	11	Unmodified	_NKNGKPKRQQR_					0	0	0			REV__ENST00000537699.1_1_12:10603035-10603776:-|nuORF	REV__ENST00000537699.1_1_12:10603035-10603776:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9344360232353	3	451.932248	1352.77491	2.4766	0.0011192	1.8294	0.00082677	4.306	0.001946	451.933098551888	85.54	1.3865	85.54	84.716	86.103	0					111	43	3	0	0	0	1.0366	1	35701	35701		0.40827	0.26837	1	3321100	+		22981	9909	11426	11479	26389	26389					0.11263682828712263
NKNGNPHR	8	Unmodified	_NKNGNPHR_					0	0	0		ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	312.1356384158134	3	312.83013	935.468561	-2.2049	-0.00068977	3.0942	0.00096795	0.88922	0.00027817	312.8327350158889	43.427	1.2977	43.427	42.353	43.651	0					59	41	2	0	0	0	2.3239	1	17738	17738		1.6526	1.6526	1	595510			22982	5239	11427	11480	26390	26390					-0.0017550261353562746
NKNGNPHR	8	Unmodified	_NKNGNPHR_					0	0	0		ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	313.0682250857353	3	312.83013	935.468561	0.91922	0.00028756	1.4534	0.00045468	2.3727	0.00074224	312.8316372194578	38.941	1.1817	39.25	38.706	39.888	0.30857					68	41	2	0	0	0	2.3239	1	16302	16302		1.6526	1.1943	1	918910			22983	5239	11427	11480	26391	26391					-0.0017550261353562746
NKNGNPHR	8	Unmodified	_NKNGNPHR_					0	0	0		ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	ENSG00000214274|ENST00000397990|ANG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	312.1348754763603	3	312.83013	935.468561	0.39806	0.00012453	2.8893	0.00090385	3.2873	0.0010284	312.83161057083686	38.336	0.8843	40.172	39.834	40.719	1.8366					49	27	2	0	0	0	2.3239	1	15985	15985		0.40072	0	1	1430000			22984	5239	11427	11480	26392	26392					-0.0017550261353562746
NKNKARIS	8	Unmodified	_NKNKARIS_					0	0	0			REV__tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	REV__tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7784301638603	2	465.777608	929.540663	2.1314	0.00099276	-0.74317	-0.00034615	1.3882	0.0006466	465.7771367971994	77.68	0.52948	77.68	77.44	77.969	0					46	16	4	0	0	0	0.89178	1	32389	32389		0.69038	0	1	18280000	+		22985	15470	11428	11481	26393	26393					0.07307411740168845
NKNKARIS	8	Unmodified	_NKNKARIS_					0	0	0			REV__tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	REV__tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7785217165947	2	465.777608	929.540663	2.6459	0.0012324	-0.74775	-0.00034828	1.8982	0.00088414	465.7771176758713	77.581	0.56447	77.897	77.574	78.138	0.31653					50	17	4	0	0	0	0.89051	2	32447	32361;32447		2.3027	0	1	17927000	+		22986	15470	11428	11481	26394;26395	26395					0.07307411740168845
NKNKGDYN	8	Unmodified	_NKNKGDYN_					0	0	0			REV__tr|A0A7D7A311|A0A7D7A311_9CLOTBifunctionalproteinGlmUOS=ClostridiumintestinaleOX=36845GN=glmUPE=3SV=1	REV__tr|A0A7D7A311|A0A7D7A311_9CLOTBifunctionalproteinGlmUOS=ClostridiumintestinaleOX=36845GN=glmUPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.8811218142509	3	318.154279	951.441008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.703	1	36.978	36.478	37.478	1.2746								0	0	0	1.0178	1	14988	14988		1.4819	0	1		+		22987	15856	11429	11482	26396	26396					-0.03665450664436776
NKNKGGKR	8	Unmodified	_NKNKGGKR_					0	0	0			REV__ENST00000296785.7_1_5:72858805-72861416:-|nuORF	REV__ENST00000296785.7_1_5:72858805-72861416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2720825076103	2	451.26995	900.525347	1.9162	0.00086473	-0.27804	-0.00012547	1.6382	0.00073925	451.2698613247651	63.801	0.30352	63.801	63.587	63.89	0					15	9	2	0	0	0	0.89051	1	26629	26629		2.3027	0.24298	1	1196000	+		22988	12297	11430	11483	26397	26397					0.07110544942997876
NKNKIKLGICK	11	Unmodified	_NKNKIKLGICK_					0	0	0		nc|ENSG00000128881|Q6IQ55-2|TTBK2;ENSG00000128881|ENST00000267890|TTBK2;nc|ENSG00000128881|Q6IQ55-3|TTBK2;TTBK2|p.G531Afs*12|1|0.05|ENSG00000128881|chr15:42775541-42775542|-/AATAAACATAATTAAGG|frameshift_variant;TTBK2|p.T566Qfs*5|1|0.14|ENSG00000128881|chr15:42775438-42775438|C/-|frameshift_variant	nc|ENSG00000128881|Q6IQ55-2|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2612487673759	3	420.260314	1257.75911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.84	1	103.02	102.52	103.52	0.18066								0	0	0	0.63775	1	43276	43276		0.45452	0.29519	1				22989	2387	11431	11484	26398	26398					0.14054260267471363
NKNKITITN	9	Unmodified	_NKNKITITN_					0	0	0		ENSG00000044574|ENST00000324460|HSPA5;ENST00000509378.1_1_4:165110937-165111516:+|nuORF	ENSG00000044574|ENST00000324460|HSPA5	ENSG00000044574|ENST00000324460|HSPA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3053466677666	2	523.303655	1044.59276	2.6305	0.0013766	0.31672	0.00016574	2.9473	0.0015423	523.3040329857495	84.618	0.44362	84.618	84.337	84.781	0					27	13	3	0	0	0	0.83753	1	35224	35224		1.8442	0	1	1599900			22990	672	11432	11485	26399	26399					0.07224530363282611
NKNKKKSK	8	Unmodified	_NKNKKKSK_					0	0	0		tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.8098632693291	2	487.808908	973.603263	2.3212	0.0011323	1.3685	0.00066756	3.6897	0.0017999	487.80921405773756	89.322	0.4426	89.322	89.083	89.526	0					30	13	3	0	0	0	0.89051	2	37316	37316;37368		2.3027	0	1	3547600			22991	16849	11433	11486	26400;26401	26400					0.11540557808370977
NKNKKKSK	8	Unmodified	_NKNKKKSK_					0	0	0		tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	tr|A0A7D6VRX2|A0A7D6VRX2_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.8108093142509	2	487.808908	973.603263	3.3444	0.0016314	1.2466	0.00060811	4.591	0.0022395	487.80933694241406	89.182	0.48246	89.406	89.101	89.583	0.22359					40	14	4	0	0	0	0.89051	1	37361	37361		2.3027	0	1	3923100			22992	16849	11433	11486	26402	26402					0.11540557808370977
NKNKKRFW	8	Unmodified	_NKNKKRFW_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2175781130791	3	374.217325	1119.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.821	1	66.145	65.645	66.645	0.32449								0	0	0	1.0178	1	27560	27560		1.4819	0.51963	1		+		22993	12655	11434	11487	26403	26403					0.07511666419554786
NKNKKRFW	8	Unmodified	_NKNKKRFW_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2177612185478	3	374.217325	1119.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.207	1	81.497	80.997	81.997	0.29056								0	0	0	1.0178	1	33948	33948		0.40072	0	1		+		22994	12655	11434	11487	26404	26404					0.07511666419554786
NKNKKRFW	8	Unmodified	_NKNKKRFW_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2171508669853	3	374.217325	1119.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.368	1	81.659	81.159	82.159	0.29056								0	0	0	1.0178	1	34017	34017		1.4819	0.51963	1		+		22995	12655	11434	11487	26405	26405					0.07511666419554786
NKNKLNNI	8	Unmodified	_NKNKLNNI_					0	0	0			REV__tr|A0A7D6W3R7|A0A7D6W3R7_9CLOTNucleoside/nucleotidekinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10940PE=4SV=1	REV__tr|A0A7D6W3R7|A0A7D6W3R7_9CLOTNucleoside/nucleotidekinasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10940PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	479.2508422732353	2	479.277441	956.540328	2.7224	0.0013048	0.52914	0.0002536	3.2515	0.0015584	479.2777388362033	64.549	1.1454	64.878	64.658	65.803	0.32899					62	35	3	0	0	0	2.3239	1	27227	27227		0.6015	0.076735	1	1127300	+		22996	15616	11435	11488	26406	26406					0.06031992020314192
NKNKNGRI	8	Unmodified	_NKNKNGRI_					0	0	0		ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2764160037041	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.582	1	66.906	66.406	67.406	0.32449								0	0	0	1.0178	1	27871	27871		2.3027	0.4585	1				22997	2971	11436	11489	26407	26407					0.06234527597428041
NKNKNGRI	8	Unmodified	_NKNKNGRI_					0	0	0		ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2784606814384	2	472.275232	942.535912	3.8428	0.0018149	3.3861	0.0015991	7.2289	0.003414	472.27696250660784	97.589	0.14793	97.817	97.716	97.863	0.22776					7	4	2	0	0	0	0.88663	1	41071	41071		4.756	0.81161	1	10766000			22998	2971	11436	11489	26408	26408					0.06234527597428041
NKNKNGRI	8	Unmodified	_NKNKNGRI_					0	0	0		ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	ENSG00000141582|ENST00000269397|CBX4	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2768432497978	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.216	1	67.124	66.624	67.624	1.9085								0	0	0	1.0178	1	27355	27355		5.2307	0	1				22999	2971	11436	11489	26409	26409					0.06234527597428041
NKNKNKVIK	9	Unmodified	_NKNKNKVIK_					0	0	0			REV__ENSG00000141582|ENST00000269397|CBX4	REV__ENSG00000141582|ENST00000269397|CBX4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2534667849541	3	362.564502	1084.67168	2.3531	0.00085314	-3.6776	-0.0013334	-1.3245	-0.00048023	362.562770227399	75.382	0.30773	77.163	77.04	77.347	1.7817					13	9	2	0	0	0	0.11941	1	31683	31683		1.0715	0.83562	1	283810	+		23000	10161	11437	11490	26410	26410					0.1327280238822368
NKNKRLAP	8	Unmodified	_NKNKRLAP_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.7116882205009	3	314.194409	939.561398	-0.041649	-1.3086E-05	3.1636	0.00099399	3.122	0.0009809	314.19552892439367	25.545	0.43151	27.262	27.152	27.584	1.7167					17	13	2	0	0	0	2.3239	1	10690	10690		0.40072	0	1	766450	+		23001	8697	11438	11491	26411	26411					0.08920002119850778
NKNKSLPR	8	Unmodified	_NKNKSLPR_					0	0	0		ENST00000397042.7_1_20:37203628-37203784:+|nuORF	ENST00000397042.7_1_20:37203628-37203784:+|nuORF	ENST00000397042.7_1_20:37203628-37203784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7868835330009	2	478.785433	955.556313	3.623	0.0017346	-0.12107	-5.7969E-05	3.5019	0.0016767	478.7851941445017	73.824	0.53294	75.142	74.841	75.374	1.318					38	16	3	0	0	0	0.8909	1	30960	30960		2.0598	0	1	4796300			23002	6306	11439	11492	26412	26412					0.0767569825721921
NKNKVGPS	8	Unmodified	_NKNKVGPS_					0	0	0			REV__ENSG00000103194|ENST00000219473|USP10	REV__ENSG00000103194|ENST00000219473|USP10	MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7722045779228	2	422.237784	842.461016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.607	1	76.928	76.428	77.428	0.32163								0	0	0	1.0178	1	32040	32040		2.3027	0.24298	1		+		23003	9097	11440	11493	26413	26413					0.033483450661947245
NKNKVKNV	8	Unmodified	_NKNKVKNV_					0	0	0			REV__ENSG00000115816|ENST00000234170|CEBPZ	REV__ENSG00000115816|ENST00000234170|CEBPZ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2888671755791	2	472.287808	942.561064	2.2787	0.0010762	0.075276	3.5552E-05	2.354	0.0011118	472.28760227699803	78.987	1.1995	78.987	78.441	79.641	0					96	38	5	0	0	0	0.89178	1	32832	32832		0.69038	0	1	189500000	+		23004	9455	11441	11494	26414	26414					0.0874858239999412
NKNKVVDE	8	Unmodified	_NKNKVVDE_					0	0	0		tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	316.1761352419853	3	315.83818	944.49271	1.7765	0.00056109	2.7301	0.00086226	4.5066	0.0014234	315.83788982992263	58.518	1.1025	58.841	58.173	59.276	0.32299					48	35	2	0	0	0	0.89051	1	24462	24462		3.5965	0	1	1752600			23005	16112	11442	11495	26415	26415					0.018242930294718462
NKNKVVDE	8	Unmodified	_NKNKVVDE_					0	0	0		tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	tr|A0A553SGK9|A0A553SGK9_NIACI23SrRNA(Uracil(1939)-C(5))-methyltransferaseRlmDOS=NialliacirculansOX=1397GN=rlmDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	315.83818	944.49271	-0.71302	-0.0002252	-0.13121	-4.1442E-05	-0.84423	-0.00026664	315.83745010271895	57.398	0.18596	58.813	58.718	58.904	1.4145	-0.014279	-0.0022376	NaN	3.5965	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1372900			23006	16112	11442	11495							0.018242930294718462
NKNKVYVRTKD	11	Unmodified	_NKNKVYVRTKD_					0	0	0		tr|A0A553SHG4|A0A553SHG4_NIACINucleosidetriphosphatepyrophosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_12855PE=4SV=1	tr|A0A553SHG4|A0A553SHG4_NIACINucleosidetriphosphatepyrophosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_12855PE=4SV=1	tr|A0A553SHG4|A0A553SHG4_NIACINucleosidetriphosphatepyrophosphohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_12855PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.5941955447197	3	455.593009	1363.7572	3.4881	0.0015892	-1.1526	-0.00052514	2.3355	0.001064	455.59221945381177	93.412	0.56744	94.689	94.292	94.859	1.277					43	17	3	0	0	0	1.0365	1	39265	39265		1.2148	0.70888	1	689120			23007	16151	11443	11496	26416	26416					0.08986922783219597
NKNMNEET	8	Unmodified	_NKNMNEET_					0	0	0			REV__nc|ENSG00000116785|Q02985-2|CFHR3	REV__nc|ENSG00000116785|Q02985-2|CFHR3	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.1422607302666	3	327.143163	978.407659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.276	1	53.599	53.099	54.099	0.32283								0	0	0	1.0178	1	22317	22317		0.40072	0	1		+		23008	9482	11444	11497	26417	26417					-0.08240820498645007
NKNPEEYQ	8	Unmodified	_NKNPEEYQ_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.1586181521416	3	341.157689	1020.45124	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.717	1	80.969	80.469	81.469	1.2512								0	0	0	1.0178	1	33460	33460		0.40072	0	1				23009	491	11445	11498	26418	26418					-0.05816887729861264
NKNPEEYQ	8	Unmodified	_NKNPEEYQ_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.1579467654228	3	341.157689	1020.45124	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.279	1	81.014	80.514	81.514	1.735								0	0	0	1.0178	1	33250	33250		0.40072	0	1				23010	491	11445	11498	26419	26419					-0.05816887729861264
NKNRHKNR	8	Unmodified	_NKNRHKNR_					0	0	0		ENST00000409202.7_1_2:68962069-68962258:+|nuORF	ENST00000409202.7_1_2:68962069-68962258:+|nuORF	ENST00000409202.7_1_2:68962069-68962258:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	356.2044250369072	3	356.204079	1065.59041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.338	1	87.338	86.838	87.838	0								0	0	0	1.0178	1	36489	36489		1.4819	0.26707	1				23011	6378	11446	11499	26420	26420					0.060235394688334054
NKNSGDDS	8	Unmodified	_NKNSGDDS_					0	0	0		tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3166381716728	2	418.672671	835.330789	2.211	0.00092568	-4.1626	-0.0017428	-1.9516	-0.00081707	418.6716490686524	77.567	0.18678	77.883	77.826	78.013	0.31653					8	5	2	0	0	0	2.3239	1	32454	32454		0.69038	0	1	237290			23012	16775	11447	11500	26421	26421					-0.09346295723469211
NKNSGDDS	8	Unmodified	_NKNSGDDS_					0	0	0		tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	tr|A0A7D6VPV6|A0A7D6VPV6_9CLOTPhagetailproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13125PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3159362673759	2	418.672671	835.330789	2.444	0.0010232	-4.1933	-0.0017556	-1.7493	-0.00073237	418.67145146501906	76.634	0.19017	77.927	77.762	77.952	1.2938					6	5	2	0	0	0	2.3239	1	32130	32130		0.69038	0	1	215860			23013	16775	11447	11500	26422	26422					-0.09346295723469211
NKNTTNSVE	9	Unmodified	_NKNTTNSVE_					0	0	0			REV__tr|A0A7D7AD73|A0A7D7AD73_9CLOTClassCsortaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22030PE=4SV=1	REV__tr|A0A7D7AD73|A0A7D7AD73_9CLOTClassCsortaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1638061404228	3	336.164844	1005.4727	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.45	1	72.792	72.292	73.292	1.3415								0	0	0	0.42693	1	29988	29988		1.0715	0	1		+		23014	15906	11448	11501	26423	26423					-0.029815027011409256
NKPAPFEV	8	Unmodified	_NKPAPFEV_					0	0	0			REV__nc|ENSG00000166313|O00213-4|APBB1	REV__nc|ENSG00000166313|O00213-4|APBB1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1644775271416	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.211	1	73.536	73.036	74.036	0.32494								0	0	0	1.0178	1	30625	30625		0.40072	0	1		+		23015	10819	11449	11502	26424	26424					0.016301133517117705
NKPAPFEV	8	Unmodified	_NKPAPFEV_					0	0	0			REV__nc|ENSG00000166313|O00213-4|APBB1	REV__nc|ENSG00000166313|O00213-4|APBB1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1647216677666	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.067	1	75.863	75.363	76.363	1.7962								0	0	0	1.0178	1	31071	31071		0.40072	0	1		+		23016	10819	11449	11502	26425	26425					0.016301133517117705
NKPDLSDLH	9	Unmodified	_NKPDLSDLH_					0	0	0		tr|A0A553SH44|A0A553SH44_NIACISqualene--hopenecyclaseOS=NialliacirculansOX=1397GN=CEQ21_12070PE=3SV=1	tr|A0A553SH44|A0A553SH44_NIACISqualene--hopenecyclaseOS=NialliacirculansOX=1397GN=CEQ21_12070PE=3SV=1	tr|A0A553SH44|A0A553SH44_NIACISqualene--hopenecyclaseOS=NialliacirculansOX=1397GN=CEQ21_12070PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	346.2218505740166	3	346.845334	1037.51417	-1.252	-0.00043424	-2.5145	-0.00087213	-3.7664	-0.0013064	346.8442491887249	79.746	0.34187	79.746	79.545	79.887	0					32	10	5	0	0	0	0.11941	1	33124	33124		0.23584	0.028987	1	1299200			23017	16133	11450	11503	26426	26426					-0.0030832194181584782
NKPEWPAA	8	Unmodified	_NKPEWPAA_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.1761047244072	3	304.823982	911.450116	1.1633	0.00035459	-0.63777	-0.00019441	0.52548	0.00016018	304.8231850625666	78.011	0.32156	78.32	78.131	78.453	0.30933					13	9	2	0	0	0	2.3239	1	32624	32624		0	0	1	140950			23018	3759	11451	11504	26427	26427					-0.009150573081114999
NKPFARIV	8	Unmodified	_NKPFARIV_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN;HYDIN|p.D3716Mfs*6|1|0.06|ENSG00000157423|chr16:70868734-70868734|C/-|frameshift_variant	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7126342654228	3	315.527388	943.560336	0.2143	6.7618E-05	2.3623	0.00074539	2.5766	0.000813	315.528103403751	26.021	0.87767	26.273	25.737	26.614	0.25197					62	28	3	0	0	0	2.3239	1	10807	10807		0.40072	0	1	916370			23019	3471	11452	11505	26428	26428					0.08629787750942342
NKPFLKLG	8	Unmodified	_NKPFLKLG_					0	0	0		nc|ENSG00000116539|Q9NR48|ASH1L;ENSG00000116539|ENST00000392403|ASH1L;ASH1L|p.S1069Pfs*5|1|0.07|ENSG00000116539|chr1:155479664-155479665|CT/-|frameshift_variant	nc|ENSG00000116539|Q9NR48|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1931945681572	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.713	1	99.786	99.286	100.29	0.072716								0	0	0	1.0178	1	41751	41751		0.40072	0	1				23020	1971	11453	11506	26429	26429					0.09303269519421065
NKPGLKHKP	9	Unmodified	_NKPGLKHKP_					0	0	0		nc|ENSG00000122787|P51857-2|AKR1D1;ENSG00000122787|ENST00000242375|AKR1D1	nc|ENSG00000122787|P51857-2|AKR1D1	nc|ENSG00000122787|P51857-2|AKR1D1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2100402712822	3	340.210059	1017.60835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.954	1	51.283	50.783	51.783	0.32824								0	0	0	0.42693	1	21347	21347		1.0715	0.61312	1				23021	2170	11454	11507	26430	26430					0.10024861670979135
NKPGLKHKP	9	Unmodified	_NKPGLKHKP_					0	0	0		nc|ENSG00000122787|P51857-2|AKR1D1;ENSG00000122787|ENST00000242375|AKR1D1	nc|ENSG00000122787|P51857-2|AKR1D1	nc|ENSG00000122787|P51857-2|AKR1D1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2130920290947	3	340.210059	1017.60835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.382	1	60.711	60.211	61.211	0.32809								0	0	0	0.42693	1	25303	25303		1.0715	0.10919	1				23022	2170	11454	11507	26431	26431					0.10024861670979135
NKPGRLQVI	9	Unmodified	_NKPGRLQVI_					0	0	0			REV__ENST00000487169.5_1_2:242174673-242189369:-|nuORF	REV__ENST00000487169.5_1_2:242174673-242189369:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2118102908134	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.585	1	19.564	19.064	20.064	0.97922								0	0	0	0.42693	1	7742	7742		1.0715	0	1		+		23023	9449	11455	11508	26432	26432					0.10804844325411977
NKPIVRAI	8	Unmodified	_NKPIVRAI_					0	0	0			REV__tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	REV__tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2480956912041	3	304.199272	909.575986	0.90123	0.00027415	-1.9445	-0.00059151	-1.0432	-0.00031736	304.198238788599	39.383	0.33899	41.219	41.037	41.376	1.8366					14	10	2	0	0	0	2.3239	1	16552	16552		0.40072	0	1	842610	+		23024	14999	11456	11509	26433	26433					0.11758074267970642
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.8726074099541	3	332.871155	995.591636	1.0884	0.0003623	2.7485	0.0009149	3.8369	0.0012772	332.87240652376335	39.929	0.51965	40.241	39.861	40.381	0.31263					78	16	6	0	0	0	0.88587	4	16741	16669;16741;16790;16829		3.5965	0	1	256120000	+		23025	11499	11457	11510	26434;26435;26436;26437	26435					0.09366360785043071
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8052856326103	2	498.803094	995.591636	2.2869	0.0011407	1.699	0.00084746	3.9859	0.0019882	498.8039177223351	40.365	0.47231	40.678	40.412	40.884	0.31263					38	14	3	0	0	0	0.88587	1	17002	17002		5.2307	0	1	4229900	+		23026	11499	11457	11510	26438	26438					0.09366360785043071
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	332.8721801638603	3	332.871155	995.591636	0.23725	7.8973E-05	1.4673	0.00048841	1.7045	0.00056739	332.8717466660806	38.339	0.52047	39.635	39.285	39.805	1.2961					72	16	5	0	0	0	0.88587	3	15993	15993;16080;16127		3.5965	0	1	413190000	+		23027	11499	11457	11510	26439;26440;26441	26439					0.09366360785043071
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	332.8719665408134	3	332.871155	995.591636	0.61603	0.00020506	2.038	0.0006784	2.6541	0.00088346	332.8720230017161	38.789	0.54534	40.085	39.805	40.35	1.2961					68	17	5	0	0	0	0.88587	1	16166	16166		3.5965	0	1	343560000	+		23028	11499	11457	11510	26442	26442					0.09366360785043071
NKPKLIFH	8	Unmodified	_NKPKLIFH_					0	0	0			REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	REV__nc|ENSG00000186377|Q8N118-3|CYP4X1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8723632693291	3	332.871155	995.591636	0.21366	7.112E-05	1.7436	0.0005804	1.9573	0.00065152	332.87189799765605	37.735	0.477	39.556	39.224	39.701	1.8202					70	15	5	0	0	0	0.88587	3	15807	15807;15846;15885		3.5965	0	1	326050000	+		23029	11499	11457	11510	26443;26444;26445	26443					0.09366360785043071
NKPKLRDR	8	Unmodified	_NKPKLRDR_					0	0	0		nc|ENSG00000147202|O60879-3|DIAPH2	nc|ENSG00000147202|O60879-3|DIAPH2	nc|ENSG00000147202|O60879-3|DIAPH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8758117556572	3	342.87708	1025.60941	-1.4852	-0.00050925	-1.0281	-0.00035251	-2.5133	-0.00086177	342.8765924607928	40.18	1.0974	40.18	39.544	40.642	0					99	34	4	0	0	0	0.88508	1	16920	16920		5.7319	0.83484	1	8171300			23030	7892	11458	11511	26446	26446					0.09763076039894258
NKPKVQCC	8	Unmodified	_NKPKVQCC_					0	0	0		ENSG00000103769|ENST00000261890|RAB11A	ENSG00000103769|ENST00000261890|RAB11A	ENSG00000103769|ENST00000261890|RAB11A	MSMS	GG20161007_CRH_Patient100_A02_01	1	307.1534606814384	3	307.154457	918.441542	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.148	1	96.148	95.648	96.648	0								0	0	0	1.0178	1	40197	40197		1.4819	1.0236	1				23031	1442	11459	11512	26447	26447					-0.020940705405905646
NKPNIKRH	8	Unmodified	_NKPNIKRH_					0	0	0			REV__ENSG00000198839|ENST00000361822|ZNF277	REV__ENSG00000198839|ENST00000361822|ZNF277	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.2021667361259	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.092	1	32.373	31.873	32.873	1.2813								0	0	0	1.0178	1	13045	13045		0.45834	0	1		+		23032	11744	11460	11513	26448	26448					0.08062806868417738
NKPRLLAAR	9	Unmodified	_NKPRLLAAR_					0	0	0			REV__ENST00000559163.6_1_15:102506425-102512084:+|nuORF	REV__ENST00000559163.6_1_15:102506425-102512084:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.2239562869072	3	346.889209	1037.6458	1.4885	0.00051634	0.90256	0.00031309	2.391	0.00082943	347.2249739160408	62.776	0.59114	63.106	62.975	63.566	0.32974					32	18	2	0	0	0	0.11944	1	26262	26262		0.20686	0	1	1425600	+		23033	13889	11461	11514	26449	26449					0.12847952936590445
NKPTLKLV	8	Unmodified	_NKPTLKLV_					0	0	0			REV__ENST00000510006.5_1_5:102343196-102343304:+|nuORF	REV__ENST00000510006.5_1_5:102343196-102343304:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7976562380791	2	456.797478	911.580402	1.6536	0.00075538	0.70951	0.0003241	2.3632	0.0010795	456.79799596151867	67.412	0.39877	69.282	69.059	69.458	1.87					17	12	2	0	0	0	0.88261	1	28284	28284		10.183	0	1	738090	+		23034	13565	11462	11515	26450	26450					0.1210753869089558
NKPVKAPLQ	9	Unmodified	_NKPVKAPLQ_					0	0	0		ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2077209353447	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.177	1	64.506	64.006	65.006	0.32899								0	0	0	0.42693	1	26887	26887		0.96228	0.50394	1				23035	1262	11463	11516	26451	26451					0.10006039576853709
NKPVKAPLQ	9	Unmodified	_NKPVKAPLQ_					0	0	0		ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2070800662041	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.797	1	71.121	70.621	71.621	0.32359								0	0	0	0.42693	1	29636	29636		0.96228	0.50394	1				23036	1262	11463	11516	26452	26452					0.10006039576853709
NKPVKAPLQ	9	Unmodified	_NKPVKAPLQ_					0	0	0		ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2072021365166	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.432	1	78.741	78.241	79.241	0.30933								0	0	0	0.42693	1	32791	32791		0.96228	0.56156	1				23037	1262	11463	11516	26453	26453					0.10006039576853709
NKPVKAPLQ	9	Unmodified	_NKPVKAPLQ_					0	0	0		ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2072021365166	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.68	1	82.952	82.452	83.452	0.27174								0	0	0	0.42693	1	34575	34575		0.96228	0.50394	1				23038	1262	11463	11516	26454	26454					0.10006039576853709
NKPVKAPLQ	9	Unmodified	_NKPVKAPLQ_					0	0	0		ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	ENSG00000100312|ENST00000216139|ACR	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2077514529228	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.05	1	85.311	84.811	85.811	0.26083								0	0	0	0.42693	1	35563	35563		0.96228	0.56156	1				23039	1262	11463	11516	26455	26455					0.10006039576853709
NKPVKQTDL	9	Unmodified	_NKPVKQTDL_					0	0	0		tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2286865115166	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.949	1	58.272	57.772	58.772	0.32298								0	0	0	0.42693	1	24293	24293		1.0715	0.3738	1				23040	16074	11464	11517	26456	26456					0.06273127989015848
NKPVKQTDL	9	Unmodified	_NKPVKQTDL_					0	0	0		tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2047607302666	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.984	1	58.307	57.807	58.807	0.32298								0	0	0	0.42693	1	24307	24307		1.0715	0.29493	1				23041	16074	11464	11517	26457	26457					0.06273127989015848
NKPVKQTDL	9	Unmodified	_NKPVKQTDL_					0	0	0		tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2015563845634	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.395	1	77.712	77.212	78.212	0.31653								0	0	0	0.42693	1	32365	32365		0.96228	0.56156	1				23042	16074	11464	11517	26458	26458					0.06273127989015848
NKPVKQTDL	9	Unmodified	_NKPVKQTDL_					0	0	0		tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	tr|A0A553SFR0|A0A553SFR0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09350PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2030517458916	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.538	1	91.904	91.404	92.404	1.366								0	0	0	0.42693	1	38132	38132		2.4985	1.427	1				23043	16074	11464	11517	26459	26459					0.06273127989015848
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2382079958916	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.404	1	89.404	88.904	89.904	0								0	0	0	0.66222	1	37371	37371		0.69767	0.53834	1				23044	4796	11465	11518	26460	26460					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2379333376884	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.209	1	93.209	92.709	93.709	0								0	0	0	0.66222	1	38958	38958		0.69767	0	1				23045	4796	11465	11518	26461	26461					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2383300662041	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.386	1	93.386	92.886	93.886	0								0	0	0	0.66222	1	39031	39031		0.69767	0.49081	1				23046	4796	11465	11518	26462	26462					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2383605837822	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.554	1	93.554	93.054	94.054	0								0	0	0	0.66222	1	39099	39099		0.69767	0.53834	1				23047	4796	11465	11518	26463	26463					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2385742068291	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.99	1	93.159	92.659	93.659	0.16835								0	0	0	0.66222	1	38937	38937		0.69767	0.29695	1				23048	4796	11465	11518	26464	26464					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2377807497978	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.223	1	93.391	92.891	93.891	0.16835								0	0	0	0.66222	1	39029	39029		0.69767	0.29695	1				23049	4796	11465	11518	26465	26465					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2381774783134	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.31	1	84.498	83.998	84.998	1.1879								0	0	0	0.66222	1	34968	34968		0.69767	0	1				23050	4796	11465	11518	26466	26466					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2390930056572	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.917	1	90.937	90.437	91.437	1.0199								0	0	0	0.66222	1	37891	37891		0.69767	0.53834	1				23051	4796	11465	11518	26467	26467					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2391540408134	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.248	1	94.99	94.49	95.49	0.74124								0	0	0	0.66222	1	39657	39657		0.69767	0	1				23052	4796	11465	11518	26468	26468					0.15527758679149883
NKPVLPLIGK	10	Unmodified	_NKPVLPLIGK_					0	0	0		nc|ENSG00000186566|Q9UKJ3-2|GPATCH8;ENSG00000186566|ENST00000591680|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	nc|ENSG00000186566|Q9UKJ3-2|GPATCH8	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2387267947197	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.624	1	95.365	94.865	95.865	0.74124								0	0	0	0.66222	1	39810	39810		0.69767	0	1				23053	4796	11465	11518	26469	26469					0.15527758679149883
NKQASPRIV	9	Unmodified	_NKQASPRIV_					0	0	0		ENST00000607957.1_1_7:123389592-123389883:+|nuORF	ENST00000607957.1_1_7:123389592-123389883:+|nuORF	ENST00000607957.1_1_7:123389592-123389883:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.0443298220634	3	338.201452	1011.58253	-0.27999	-9.4693E-05	3.3126	0.0011203	3.0326	0.0010256	338.2023333635462	28.726	0.33696	30.009	29.732	30.069	1.2825					15	10	2	0	0	0	0.11941	1	12070	12070		1.0715	0	1	716760			23054	7567	11466	11519	26470	26470					0.07719967428704422
NKQCKAFGL	9	Unmodified	_NKQCKAFGL_					0	0	0			REV__ENSG00000103740|ENST00000258873|ACSBG1	REV__ENSG00000103740|ENST00000258873|ACSBG1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	336.2020141482353	3	336.848022	1007.52224	1.3775	0.000464	-0.47951	-0.00016152	0.89795	0.00030247	336.84770409658387	80.38	0.21749	80.67	80.529	80.747	0.29056					11	6	2	0	0	0	0.11908	1	33607	33607		1.0715	0	1	406720	+		23055	9119	11467	11520	26471	26471					0.018775337739725728
NKQCLYKM	8	Unmodified	_NKQCLYKM_					0	0	0			REV__ENSG00000255151|ENST00000527482|GLYATL1B	REV__ENSG00000255151|ENST00000527482|GLYATL1B	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2254211306572	3	343.173629	1026.49906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.796	1	59.121	58.621	59.621	0.32553								0	0	0	1.0178	1	24640	24640		0.40072	0	1		+		23056	11968	11468	11521	26472	26472					-0.013132283350159923
NKQEFGWLIP	10	Unmodified	_NKQEFGWLIP_					0	0	0		nc|ENSG00000198848|P23141-3|CES1;nc|ENSG00000198848|P23141|CES1;ENSG00000198848|ENST00000360526|CES1	nc|ENSG00000198848|P23141-3|CES1	nc|ENSG00000198848|P23141-3|CES1	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2218505740166	3	411.220513	1230.63971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.536	1	61.505	61.005	62.005	1.969								0	0	0	0.66166	1	24981	24981		0.69767	0.24315	1				23057	5093	11469	11522	26473	26473					0.03361389914425672
NKQEWLEQID	10	Unmodified	_NKQEWLEQID_					0	0	0		tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8832580447197	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.834	1	41.834	41.334	42.334	0								0	0	0	0.66222	1	17510	17510		0.69767	0.24315	1				23058	16678	11470	11523	26474	26474					-0.013567270243811436
NKQEWLEQID	10	Unmodified	_NKQEWLEQID_					0	0	0		tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825561404228	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.27	1	39.09	38.59	39.59	1.8202								0	0	0	0.66222	1	15637	15637		0.69767	0.24315	1				23059	16678	11470	11523	26475	26475					-0.013567270243811436
NKQEWLEQID	10	Unmodified	_NKQEWLEQID_					0	0	0		tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	tr|A0A553SU44|A0A553SU44_NIACINucleartransportfactor2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_06305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831054568291	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.882	1	49.858	49.358	50.358	1.976								0	0	0	0.66222	1	20054	20054		0.69767	0	1				23060	16678	11470	11523	26476	26476					-0.013567270243811436
NKQFILTGSL	10	Unmodified	_NKQFILTGSL_					0	0	0		tr|A0A553SFR8|A0A553SFR8_NIACIHistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09355PE=4SV=1	tr|A0A553SFR8|A0A553SFR8_NIACIHistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09355PE=4SV=1	tr|A0A553SFR8|A0A553SFR8_NIACIHistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_09355PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2174255251884	3	374.21688	1119.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.47	1	78.237	77.737	78.737	1.7672								0	0	0	0.66222	1	32080	32080		0.69767	0	1				23061	16076	11471	11524	26477	26477					0.07377987540144204
NKQKSIIK	8	Unmodified	_NKQKSIIK_					0	0	0			REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2072021365166	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.909	1	50.909	50.409	51.409	0								0	0	0	1.0178	1	21234	21234		1.4819	0	1		+		23062	15557	11472	11525	26478	26478					0.11662039576856387
NKQKSIIK	8	Unmodified	_NKQKSIIK_					0	0	0			REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2062866091728	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.949	1	59.949	59.449	60.449	0								0	0	0	1.0178	1	24996	24996		1.4819	0	1		+		23063	15557	11472	11525	26479	26479					0.11662039576856387
NKQKSIIK	8	Unmodified	_NKQKSIIK_					0	0	0			REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	REV__tr|A0A7D6VY42|A0A7D6VY42_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2065917849541	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.915	1	55.316	54.816	55.816	1.4005								0	0	0	1.0178	1	22568	22568		1.4819	0	1		+		23064	15557	11472	11525	26480	26480					0.11662039576856387
NKQLADTEKLH	11	Unmodified	_NKQLADTEKLH_					0	0	0			REV__ENST00000477986.2_1_14:74512798-74514942:+|nuORF	REV__ENST00000477986.2_1_14:74512798-74514942:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.9275085330009	4	324.928117	1295.68336	-2.0505	-0.00066628	-0.6791	-0.00022066	-2.7296	-0.00088693	324.9278691784226	42.09	0.68799	42.09	41.821	42.509	0					68	21	4	0	0	0	0.98155	1	17762	17762		2.2527	0	1	25817000	+		23065	9547	11473	11526	26481	26481					0.04734954620903409
NKQLLKDVM	9	Unmodified	_NKQLLKDVM_					0	0	0		sp|P16787|UL96_HCMVAProteinUL96OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL96PE=3SV=2;sp|F5H8R6|UL96_HCMVMProteinUL96OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL96PE=3SV=1	sp|P16787|UL96_HCMVAProteinUL96OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL96PE=3SV=2	sp|P16787|UL96_HCMVAProteinUL96OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL96PE=3SV=2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2530090212822	3	363.542598	1087.60597	0.26042	9.4673E-05	-2.8972	-0.0010533	-2.6368	-0.00095859	363.54128207104594	24.647	0.47762	25.888	25.67	26.148	1.241					20	15	2	0	0	0	0.11941	1	10293	10293		1.0715	0.29493	1	399800			23066	15969	11474	11527	26482	26482					0.06566645150996919
NKQLREEYRRL	11	Unmodified	_NKQLREEYRRL_					0	0	0			REV__sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	REV__sp|Q6SVX3|US34A_HCMVMUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=US34APE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	752.9233886599541	2	752.920781	1503.82701	1.9468	0.0014658	1.7174	0.0012931	3.6642	0.0027588	752.9217397690406	65.263	0.56889	65.263	64.977	65.546	0					39	17	3	0	0	0	1.0362	1	27251	27251		1.3295	0	1	830940	+		23067	14661	11475	11528	26483	26483					0.09524801451811982
NKQLRWYPLKR	11	Unmodified	_NKQLRWYPLKR_					0	0	0		nc|ENSG00000137501|Q9HCH5-12|SYTL2;nc|ENSG00000137501|Q9HCH5-11|SYTL2;nc|ENSG00000137501|Q9HCH5-7|SYTL2;nc|ENSG00000137501|Q9HCH5-8|SYTL2;ENSG00000137501|ENST00000359152|SYTL2;nc|ENSG00000137501|Q9HCH5-4|SYTL2;nc|ENSG00000137501|Q9HCH5-9|SYTL2;nc|ENSG00000137501|Q9HCH5-2|SYTL2;COL12A1-SYTL2|1|fusion;COL12A1-SYTL2|3|fusion;COL12A1-SYTL2|2|fusion;nc|ENSG00000137501|Q9HCH5-15|SYTL2;nc|ENSG00000137501|Q9HCH5-14|SYTL2;nc|ENSG00000137501|Q9HCH5-6|SYTL2;nc|ENSG00000137501|Q9HCH5|SYTL2;nc|ENSG00000137501|Q9HCH5-13|SYTL2	nc|ENSG00000137501|Q9HCH5-12|SYTL2	nc|ENSG00000137501|Q9HCH5-12|SYTL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.0971557497978	5	301.180827	1500.86775	-2.1464	-0.00064645	2.4003	0.00072293	0.25393	7.648E-05	301.1818794863932	75.033	0.15741	75.033	74.965	75.122	0					6	4	2	0	0	0	0.14606	1	31247	31247		0.08335	0.08335	1	131680			23068	2772	11476	11529	26484	26484					0.13735187562087958
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2020446658134	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.093	1	70.093	69.593	70.593	0								0	0	0	0.42693	1	29186	29186		1.0715	0	1				23069	16645	11477	11530	26485	26485					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2020446658134	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.216	1	70.216	69.716	70.716	0								0	0	0	0.42693	1	29238	29238		1.0715	0	1				23070	16645	11477	11530	26486	26486					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2020446658134	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.289	1	78.289	77.789	78.789	0								0	0	0	0.42693	1	32591	32591		1.0715	0	1				23071	16645	11477	11530	26487	26487					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2020751833916	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.338	1	93.338	92.838	93.838	0								0	0	0	0.42693	1	39012	39012		1.0715	0	1				23072	16645	11477	11530	26488	26488					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2016174197197	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.857	1	77.173	76.673	77.673	0.31653								0	0	0	0.42693	1	32143	32143		1.0715	0	1				23073	16645	11477	11530	26489	26489					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2023193240166	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.019	1	77.336	76.836	77.836	0.31653								0	0	0	0.42693	1	32210	32210		1.0715	0	1				23074	16645	11477	11530	26490	26490					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2013122439384	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.166	1	77.483	76.983	77.983	0.31653								0	0	0	0.42693	1	32271	32271		1.0715	0	1				23075	16645	11477	11530	26491	26491					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2004882693291	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.586	1	77.902	77.402	78.402	0.31653								0	0	0	0.42693	1	32444	32444		1.0715	0	1				23076	16645	11477	11530	26492	26492					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2011901736259	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.703	1	78.019	77.519	78.519	0.31653								0	0	0	0.42693	1	32493	32493		1.0715	0	1				23077	16645	11477	11530	26493	26493					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2019531130791	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.836	1	78.145	77.645	78.645	0.30981								0	0	0	0.42693	1	32548	32548		1.0715	0	1				23078	16645	11477	11530	26494	26494					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2017394900322	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.959	1	78.268	77.768	78.768	0.30933								0	0	0	0.42693	1	32598	32598		1.0715	0	1				23079	16645	11477	11530	26495	26495					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2016479372978	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.157	1	93.326	92.826	93.826	0.16835								0	0	0	0.42693	1	39003	39003		1.0715	0	1				23080	16645	11477	11530	26496	26496					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2023803591728	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.337	1	84.525	84.025	85.025	1.1879								0	0	0	0.42693	1	34979	34979		1.0715	0	1				23081	16645	11477	11530	26497	26497					0.06273127989015848
NKQLVNLVD	9	Unmodified	_NKQLVNLVD_					0	0	0		tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	tr|A0A553STA1|A0A553STA1_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04535PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2025634646416	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.144	1	92.51	92.01	93.01	1.366								0	0	0	0.42693	1	38379	38379		1.0715	0	1				23082	16645	11477	11530	26498	26498					0.06273127989015848
NKQNGGAA	8	Unmodified	_NKQNGGAA_					0	0	0			REV__SOX2|p.S37N|1|0.39|ENSG00000181449|chr3:181712470-181712470|G/A|missense_variant	REV__SOX2|p.S37N|1|0.39|ENSG00000181449|chr3:181712470-181712470|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.1923705935478	2	380.190834	758.367115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.168	1	60.587	60.087	61.087	1.4196								0	0	0	1.0178	1	24810	24810		2.5775	0	1		+		23083	11322	11478	11531	26499	26499					-0.02173374036090081
NKQPDIALL	9	Unmodified	_NKQPDIALL_					0	0	0		ENSG00000003393|ENST00000264276|ALS2;ALS2|p.R1510L|1|0.07|ENSG00000003393|chr2:201706897-201706897|C/A|missense_variant	ENSG00000003393|ENST00000264276|ALS2	ENSG00000003393|ENST00000264276|ALS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.5307189822197	3	337.865958	1010.57605	-2.0232	-0.00068356	-3.245	-0.0010964	-5.2682	-0.0017799	337.8658331062537	98.434	0.07666	98.434	98.372	98.449	0					4	2	2	0	0	0	0.75101	1	41168	41168		5.2969	0.39987	1	4576700			23084	465	11479	11532	26500	26500					0.07118029477317123
NKQPNPRKKL	10	Unmodified	_NKQPNPRKKL_					0	0	0		ENSG00000126261|ENST00000246548|UBA2;nc|ENSG00000126261|Q9UBT2-2|UBA2;ISG20-UBA2|1|fusion	ENSG00000126261|ENST00000246548|UBA2;ISG20-UBA2|1|fusion	ISG20-UBA2|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	408.2249938845634	3	408.250806	1221.73059	2.791	0.0011394	-1.3942	-0.00056917	1.3968	0.00057025	408.25022790081647	89.742	0.80293	89.965	89.519	90.321	0.2236					43	24	2	0	0	0	0.1256	1	37494	37494		0.69767	0	1	550700			23085	2304;7660	11480	11533	26501	26501					0.12859278682549302
NKQQKPLEE	9	Unmodified	_NKQQKPLEE_					0	0	0		ENST00000464060.5_1_3:65438903-66023983:-|nuORF;MAGI1|p.P789Tfs*5|1|0.22|ENSG00000151276|chr3:65391193-65391194|-/T|frameshift_variant;nc|ENSG00000151276|Q96QZ7-4|MAGI1;nc|ENSG00000151276|Q96QZ7-3|MAGI1;nc|ENSG00000151276|Q96QZ7-5|MAGI1;nc|ENSG00000151276|Q96QZ7-7|MAGI1;nc|ENSG00000151276|Q96QZ7-6|MAGI1;ENSG00000151276|ENST00000402939|MAGI1;nc|ENSG00000151276|Q96QZ7|MAGI1	ENST00000464060.5_1_3:65438903-66023983:-|nuORF	ENST00000464060.5_1_3:65438903-66023983:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1016418337822	3	371.868139	1112.58259	2.4158	0.00089837	1.1052	0.000411	3.5211	0.0013094	371.8691115590839	86.033	0.48666	86.286	86.037	86.524	0.25227					23	15	2	0	0	0	0.11916	1	36052	36052		0.96228	0	1	761700			23086	3281	11481	11534	26502	26502					0.030799226380622713
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1345092654228	4	310.702849	1238.78229	-2.6181	-0.00081346	0.025398	7.8911E-06	-2.5927	-0.00080556	310.702770152908	32.852	0.34462	32.852	32.627	32.971	0					15	10	2	0	0	0	0.12561	1	13810	13810		0	0	1	249360	+		23087	12690	11482	11535	26503	26503					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.2199279665947	4	310.702849	1238.78229	-2.7058	-0.00084071	0.0031537	9.7986E-07	-2.7027	-0.00083973	310.70284247150937	30.408	1.0988	30.408	30.192	31.291	0					50	35	2	0	0	0	0.12561	1	12910	12910		0	0	1	1007600	+		23088	12690	11482	11535	26504	26504					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1345092654228	4	310.702849	1238.78229	-2.8052	-0.00087157	-0.87082	-0.00027057	-3.676	-0.0011421	310.70254925244143	28.443	0.27908	28.443	28.287	28.566	0					15	8	2	0	0	0	0.12561	1	11924	11924		0	0	1	902530	+		23089	12690	11482	11535	26505	26505					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1341735720634	4	310.702849	1238.78229	-2.858	-0.00088799	0.096783	3.0071E-05	-2.7612	-0.00085792	310.7030890179137	27.286	0.21153	27.286	27.169	27.38	0					13	6	3	0	0	0	0.12561	1	11405	11405		0	0	1	556930	+		23090	12690	11482	11535	26506	26506					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.2199584841728	4	310.702849	1238.78229	-0.47959	-0.00014901	-2.6547	-0.00082482	-3.1343	-0.00097383	310.70167054529526	30.596	0.27878	31.879	31.718	31.997	1.2825					10	8	2	0	0	0	0.12561	1	12806	12806		0	0	1	241350	+		23091	12690	11482	11535	26507	26507					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1345703005791	4	310.702849	1238.78229	-0.038848	-1.207E-05	-2.7499	-0.0008544	-2.7888	-0.00086647	310.7023165497566	26.312	0.53108	27.584	27.309	27.84	1.2715					31	16	3	0	0	0	0.12561	1	11070	11070		0.13989	0	1	488720	+		23092	12690	11482	11535	26508	26508					0.1724502237645993
NKQRKQLVLL	10	Unmodified	_NKQRKQLVLL_					0	0	0			REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	REV__ENST00000373119.8_1_X:86772781-86772838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1340820193291	4	310.702849	1238.78229	-0.020791	-6.4599E-06	-2.8237	-0.00087734	-2.8445	-0.0008838	310.70223936954557	26.21	0.45361	27.954	27.579	28.033	1.7435					19	14	2	0	0	0	0.12561	1	10848	10848		0	0	1	1128200	+		23093	12690	11482	11535	26509	26509					0.1724502237645993
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2329284548759	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.094	1	63.094	62.594	63.594	0								0	0	0	0.42693	1	26306	26306		0.96228	0.3991	1				23094	4205	11483	11536	26510	26510					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2326537966728	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.447	1	65.447	64.947	65.947	0								0	0	0	0.42693	1	27274	27274		0.96228	0.18574	1				23095	4205	11483	11536	26511	26511					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2332336306572	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.941	1	65.941	65.441	66.441	0								0	0	0	0.42693	1	27475	27475		1.0715	0.29493	1				23096	4205	11483	11536	26512	26512					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2327453494072	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.611	1	71.611	71.111	72.111	0								0	0	0	0.42693	1	29822	29822		1.0715	0.29493	1				23097	4205	11483	11536	26513	26513					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2334777712822	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.704	1	85.704	85.204	86.204	0								0	0	0	0.42693	1	35708	35708		1.0715	0.3738	1				23098	4205	11483	11536	26514	26514					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2337524294853	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.919	1	85.919	85.419	86.419	0								0	0	0	0.42693	1	35799	35799		1.0715	0.29493	1				23099	4205	11483	11536	26515	26515					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2322570681572	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.084	1	86.084	85.584	86.584	0								0	0	0	0.42693	1	35867	35867		0.96228	0.18574	1				23100	4205	11483	11536	26516	26516					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2335693240166	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.476	1	65.803	65.303	66.303	0.32689								0	0	0	0.42693	1	27417	27417		0.96228	0.26461	1				23101	4205	11483	11536	26517	26517					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2332946658134	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.067	1	70.389	69.889	70.889	0.32224								0	0	0	0.42693	1	29324	29324		1.0715	0.29493	1				23102	4205	11483	11536	26518	26518					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2327453494072	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.212	1	71.536	71.036	72.036	0.32359								0	0	0	0.42693	1	29805	29805		1.0715	0.29493	1				23103	4205	11483	11536	26519	26519					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2325622439384	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.576	1	77.892	77.392	78.392	0.31653								0	0	0	0.42693	1	32440	32440		0.96228	0.3991	1				23104	4205	11483	11536	26520	26520					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2337219119072	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.534	1	81.814	81.314	82.314	0.2802								0	0	0	0.42693	1	34090	34090		1.0715	0.3738	1				23105	4205	11483	11536	26521	26521					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2337524294853	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.237	1	82.517	82.017	83.017	0.2802								0	0	0	0.42693	1	34387	34387		1.0715	0.29493	1				23106	4205	11483	11536	26522	26522					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2335998415947	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.434	1	90.643	90.143	91.143	0.20904								0	0	0	0.42693	1	37896	37896		2.4985	0.41248	1				23107	4205	11483	11536	26523	26523					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2330505251884	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.221	1	97.312	96.812	97.812	0.090881								0	0	0	0.42693	1	40682	40682		0.96228	0.26461	1				23108	4205	11483	11536	26524	26524					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2336608767509	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.792	1	63.209	62.709	63.709	1.4177								0	0	0	0.42693	1	25915	25915		0.96228	0.26461	1				23109	4205	11483	11536	26525	26525					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2322570681572	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.703	1	73.045	72.545	73.545	1.3415								0	0	0	0.42693	1	30093	30093		1.0715	0.10919	1				23110	4205	11483	11536	26526	26526					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2338134646416	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.17	1	94.042	93.542	94.542	0.87176								0	0	0	0.42693	1	39216	39216		1.0715	0.29493	1				23111	4205	11483	11536	26527	26527					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2332031130791	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.505	1	95.694	95.194	96.194	1.1887								0	0	0	0.42693	1	39758	39758		0.96228	0.26461	1				23112	4205	11483	11536	26528	26528					0.11526436476992785
NKQRQLRLA	9	Unmodified	_NKQRQLRLA_					0	0	0		nc|ENSG00000171772|Q8N0S2-3|SYCE1;ENST00000479535.2_1_10:135367796-135372492:-|nuORF;nc|ENSG00000171772|Q8N0S2-2|SYCE1;ENSG00000171772|ENST00000343131|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	nc|ENSG00000171772|Q8N0S2-3|SYCE1	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2332946658134	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.959	1	96.148	95.648	96.648	1.1887								0	0	0	0.42693	1	39950	39950		0.96228	0.18574	1				23113	4205	11483	11536	26529	26529					0.11526436476992785
NKQTILIPQV	10	Unmodified	_NKQTILIPQV_					0	0	0		nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275|ZEB1;ENSG00000148516|ENST00000424869|ZEB1	nc|ENSG00000148516|P37275-3|ZEB1	nc|ENSG00000148516|P37275-3|ZEB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1533691287041	3	385.236163	1152.68666	0.60258	0.00023214	1.7637	0.00067945	2.3663	0.00091158	385.2367759763994	32.832	0.41724	34.656	34.366	34.783	1.8246					68	25	4	0	0	0	0.1256	1	13646	13646		0.69767	0.19171	1	33356000			23114	3216	11484	11537	26530	26530					0.11642249465558052
NKQVSKWPLL	10	Unmodified	_NKQVSKWPLL_					0	0	0			REV__tr|A0A7D6ZUC7|A0A7D6ZUC7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23555PE=4SV=1	REV__tr|A0A7D6ZUC7|A0A7D6ZUC7_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23555PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.2437927126884	3	404.908157	1211.70264	1.1458	0.00046394	2.8442	0.0011516	3.99	0.0016156	405.2441298740408	85.523	0.37285	85.523	85.292	85.665	0					20	11	2	0	0	0	0.89803	1	35645	35645		1.5923	0.13716	1	1234600	+		23115	15719	11485	11538	26531	26531					0.10525955702473766
NKRARPNL	8	Unmodified	_NKRARPNL_					0	0	0			REV__nc|ENSG00000205482|P0DV79|SPDYE18	REV__nc|ENSG00000205482|P0DV79|SPDYE18	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	323.1103393435478	3	323.529792	967.567546	-2.7435	-0.0008876	-1.1255	-0.00036413	-3.869	-0.0012517	323.52959893067833	26.393	0.41634	26.393	26.148	26.564	0					25	13	2	0	0	0	2.3239	1	10942	10942		0.40072	0	1	85550000	+		23116	14530	11486	11539	26532	26532					0.08246520351360687
NKRDLLMV	8	Unmodified	_NKRDLLMV_					0	0	0			REV__tr|A0A553SLY9|A0A553SLY9_NIACIMOSCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21520PE=4SV=1	REV__tr|A0A553SLY9|A0A553SLY9_NIACIMOSCdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_21520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	330.1906616091728	3	330.191788	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.161	1	73.161	72.661	73.661	0								0	0	0	1.0178	1	30460	30460		0.40072	0	1		+		23117	15000	11487	11540	26533	26533					0.059261068080672885
NKRFARMV	8	Unmodified	_NKRFARMV_					0	0	0			REV__ENSG00000133983|ENST00000389912|COX16	REV__ENSG00000133983|ENST00000389912|COX16	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1949035525322	3	341.195644	1020.5651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.44	1	90.44	89.94	90.94	0								0	0	0	1.0178	1	37799	37799		0.40072	0	1		+		23118	9889	11488	11541	26534	26534					0.05564348622056059
NKRFVKKR	8	Unmodified	_NKRFVKKR_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MSMS	GG20161007_CRH_Patient100_W632_02	4	359.2332641482353	3	359.233087	1074.67743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.086	1	50.063	49.563	50.563	1.9772								0	0	0	1.0178	1	20140	20140		0.40072	0	1		+		23119	10776	11489	11542	26535	26535					0.14307945690552515
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.0873290896416	4	359.481857	1433.89832	-1.0196	-0.00036651	2.1437	0.00077063	1.1242	0.00040412	359.48241774664433	39.976	0.18909	39.976	39.82	40.009	0					7	5	2	0	0	0	0.14606	1	16693	16693		0.08335	0.08335	1	411960	+		23120	10776	11490	11543	26536	26536					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4826843142509	4	359.481857	1433.89832	0.75941	0.00027299	2.2926	0.00082414	3.052	0.0010971	359.4825723376795	28.108	1.3426	28.379	28.179	29.521	0.27119					126	43	5	0	0	0	1.0402	4	11759	11759;11856;11908;11962		0.08335	0.08335	1	15384000	+		23121	10776	11490	11543	26537;26538;26539;26540	26537					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4835388064384	4	359.481857	1433.89832	0.41739	0.00015004	3.5585	0.0012792	3.9759	0.0014293	359.48299679152814	29.988	1.6772	31.803	30.914	32.591	1.8151					97	54	4	0	0	0	1.039	1	12482	12482		0.45452	0.087843	1	1879600	+		23122	10776	11490	11543	26541	26541					0.19872965947138255
NKRFVKKRFVI	11	Unmodified	_NKRFVKKRFVI_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	359.481857	1433.89832	1.3857	0.00049815	2.1817	0.0007843	3.5675	0.0012824	359.48265717613697	39.824	0.11383	40.136	40.05	40.164	0.31263	0.08002	2.8613E-05	NaN	0.08335	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	731430	+		23123	10776	11490	11543							0.19872965947138255
NKRHKKKRKK	10	Unmodified	_NKRHKKKRKK_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0814697146416	4	338.478378	1349.8844	-1.9987	-0.00067652	0.056308	1.9059E-05	-1.9424	-0.00065746	338.4782606904825	31.425	0.45477	31.425	31.11	31.565	0					32	14	3	0	0	0	0.12561	1	13227	13227		0.13989	0	1	1188600	+		23124	10062	11491	11544	26542	26542					0.22345733238717003
NKRHKKKRKK	10	Unmodified	_NKRHKKKRKK_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0457946658134	4	338.478378	1349.8844	-2.0837	-0.00070527	1.1257	0.00038102	-0.95797	-0.00032425	338.4786975280032	29.438	0.3043	29.438	29.272	29.576	0					25	9	4	0	0	0	0.12561	1	12345	12345		0.13989	0	1	1821600	+		23125	10062	11491	11544	26543	26543					0.22345733238717003
NKRHKKKRKK	10	Unmodified	_NKRHKKKRKK_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.0809203982353	4	338.478378	1349.8844	0.63577	0.00021519	-2.7728	-0.00093852	-2.137	-0.00072333	338.4772746418485	30.296	0.52772	30.582	30.293	30.82	0.2859					37	17	3	0	0	0	0.12561	1	12620	12620		0	0	1	1570000	+		23126	10062	11491	11544	26544	26544					0.22345733238717003
NKRHKKKRKK	10	Unmodified	_NKRHKKKRKK_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.0815612673759	4	338.478378	1349.8844	0.65486	0.00022165	-2.8956	-0.0009801	-2.2408	-0.00075845	338.47719817957113	30.705	0.29489	30.991	30.82	31.115	0.2859					12	9	2	0	0	0	0.12561	1	12828	12828		0	0	1	541770	+		23127	10062	11491	11544	26545	26545					0.22345733238717003
NKRHKKKRKK	10	Unmodified	_NKRHKKKRKK_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.0811035037041	4	338.478378	1349.8844	0.2458	8.3198E-05	-3.2074	-0.0010856	-2.9616	-0.0010024	338.7281422024856	28.484	0.78327	30.259	30.061	30.845	1.7754					33	25	2	0	0	0	0.12561	1	12169	12169		0.13989	0	1	2829900	+		23128	10062	11491	11544	26546	26546					0.22345733238717003
NKRKGVLK	8	Unmodified	_NKRKGVLK_					0	0	0			REV__nc|ENSG00000183833|Q7Z4T9-6|CFAP91	REV__nc|ENSG00000183833|Q7Z4T9-6|CFAP91	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	315.1435729861259	3	314.878421	941.613434	0.76737	0.00024163	-0.90889	-0.00028619	-0.14152	-4.4561E-05	314.87869230212243	38.916	0.15674	40.212	40.101	40.258	1.2961					6	4	2	0	0	0	2.3239	1	16338	16338		0.40072	0	1	311410	+		23129	11406	11492	11545	26547	26547					0.14029165533611376
NKRKIIAFVL	10	Unmodified	_NKRKIIAFVL_					0	0	0		nc|ENSG00000152291|O43493-6|TGOLN2;nc|ENSG00000152291|O43493-4|TGOLN2;ENSG00000152291|ENST00000377386|TGOLN2;nc|ENSG00000152291|O43493-5|TGOLN2;nc|ENSG00000152291|O43493-3|TGOLN2;nc|ENSG00000152291|O43493-7|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	nc|ENSG00000152291|O43493-6|TGOLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2013732790947	4	301.199942	1200.77066	1.0617	0.00031979	2.4482	0.00073739	3.5099	0.0010572	301.20067362691475	46.729	0.67088	47.06	46.562	47.233	0.33034					30	22	2	0	0	0	0.89803	2	19535	19535;19653		0.13989	0	1	2296600			23130	3320	11493	11546	26548;26549	26548					0.17830825353121327
NKRKIRPI	8	Unmodified	_NKRKIRPI_					0	0	0			REV__nc|ENSG00000138336|Q8NFU7-3|TET1	REV__nc|ENSG00000138336|Q8NFU7-3|TET1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2280456423759	3	342.229454	1023.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.747	1	81.747	81.247	82.247	0								0	0	0	1.0178	1	34050	34050		0.40072	0	1		+		23131	10057	11494	11547	26550	26550					0.15564543316259005
NKRKIRPI	8	Unmodified	_NKRKIRPI_					0	0	0			REV__nc|ENSG00000138336|Q8NFU7-3|TET1	REV__nc|ENSG00000138336|Q8NFU7-3|TET1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2279540896416	3	342.229454	1023.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.731	1	95.731	95.231	96.231	0								0	0	0	1.0178	1	40015	40015		0.40072	0	1		+		23132	10057	11494	11547	26551	26551					0.15564543316259005
NKRKRYRKK	9	Unmodified	_NKRKRYRKK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	426.2739135622978	3	426.273945	1275.80001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.086	1	60.414	59.914	60.914	0.32809								0	0	0	0.42693	1	25182	25182		0.96228	0.3991	1		+		23133	8636	11495	11548	26552	26552					0.17313782421956603
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	759.4965698122978	2	759.496793	1516.97903	1.3414	0.0010188	-0.09532	-7.2395E-05	1.246	0.00094636	759.4963331680941	105.8	0.11676	105.8	105.74	105.86	0					12	5	3	0	0	0	1.0405	1	45005	45005		0	0	1	20391000	+		23134	8636	11496	11549	26553	26553					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2489196658134	5	304.403083	1516.97903	-2.3533	-0.00071636	-0.086473	-2.6323E-05	-2.4398	-0.00074268	304.6038493027466	39.524	1.3327	39.524	38.837	40.169	0					61	42	2	0	0	0	0.14606	1	16803	16803		0	0	1	1369600	+		23135	8636	11496	11549	26554	26554					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2488586306572	5	304.403083	1516.97903	-2.3075	-0.00070241	1.5432	0.00046976	-0.7643	-0.00023265	304.603940193499	40.614	0.14867	40.614	40.52	40.668	0					6	4	2	0	0	0	0.14606	1	17027	17027		0	0	1	374740	+		23136	8636	11496	11549	26555	26555					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2484619021416	5	304.403083	1516.97903	-1.969	-0.00059936	2.324	0.00070743	0.35502	0.00010807	304.40412999329357	49.168	0.34617	49.168	48.938	49.284	0					15	10	2	0	0	0	0.14606	1	20484	20484		0	0	1	470540	+		23137	8636	11496	11549	26556	26556					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	380.2270995974541	4	380.252035	1516.97903	-0.23337	-8.8741E-05	-1.8016	-0.00068507	-2.035	-0.00077381	380.503028295786	75.281	0.22095	75.281	75.185	75.406	0					9	6	2	0	0	0	0.14606	1	31342	31342		0	0	1	214650	+		23138	8636	11496	11549	26557	26557					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.4013244509697	5	304.403083	1516.97903	0.52076	0.00015852	-4.408	-0.0013418	-3.8872	-0.0011833	304.4015899076942	31.57	0.61451	31.861	31.66	32.274	0.29086					35	19	2	0	0	0	1.0402	1	13337	13337		0.08335	0	1	1858900	+		23139	8636	11496	11549	26558	26558					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2485534548759	5	304.403083	1516.97903	1.0584	0.00032219	-1.2164	-0.00037028	-0.15797	-4.8086E-05	304.40308958959724	47.03	0.15873	47.36	47.233	47.392	0.33034					6	4	2	0	0	0	0.14606	1	19724	19724		0.08335	0	1	484630	+		23140	8636	11496	11549	26559	26559					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2483703494072	5	304.403083	1516.97903	0.84286	0.00025657	-4.1171	-0.0012532	-3.2742	-0.00099668	304.60275125430366	37.641	0.49764	37.946	37.649	38.146	0.30497					27	18	2	0	0	0	0.14606	1	15740	15740		0.08335	0	1	2335000	+		23141	8636	11496	11549	26560	26560					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2491332888603	5	304.403083	1516.97903	1.0664	0.00032462	-0.39913	-0.0001215	0.66728	0.00020312	304.4028922039747	45.997	0.1772	46.326	46.239	46.416	0.32899					7	5	2	0	0	0	0.14606	1	19293	19293		0.08335	0	1	407740	+		23142	8636	11496	11549	26561	26561					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2487975955009	5	304.403083	1516.97903	1.0238	0.00031166	1.6238	0.00049429	2.6476	0.00080595	304.403615151889	40.751	1.3671	41.068	40.701	42.068	0.31683					114	45	3	0	0	0	0.14606	1	17028	17028		0.08335	0	1	4189500	+		23143	8636	11496	11549	26562	26562					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2487365603447	5	304.403083	1516.97903	1.0775	0.00032799	0.60624	0.00018454	1.6837	0.00051253	304.40294785052504	44.74	0.4997	45.067	44.779	45.279	0.32674					19	16	2	0	0	0	0.14606	1	18804	18804		0	0	1	606330	+		23144	8636	11496	11549	26563	26563					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	380.2279846072197	4	380.252035	1516.97903	2.1574	0.00082035	-1.6917	-0.00064326	0.46573	0.00017709	380.2511137726778	76.325	0.18571	76.647	76.54	76.726	0.32163					8	5	2	0	0	0	0.14606	1	31888	31888		0.08335	0	1	290410	+		23145	8636	11496	11549	26564	26564					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2481262087822	5	304.403083	1516.97903	1.025	0.00031202	0.2226	6.7759E-05	1.2476	0.00037978	304.4031449571188	39.14	1.0601	40.436	40.164	41.224	1.2961					78	34	3	0	0	0	0.14606	1	16339	16339		0.08335	0	1	7189200	+		23146	8636	11496	11549	26565	26565					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2487670779228	5	304.403083	1516.97903	1.0684	0.00032522	0.31513	9.5928E-05	1.3835	0.00042114	304.4031437245309	40.362	1.5889	41.673	41.238	42.827	1.3102					96	50	2	0	0	0	0.14606	1	17356	17356		0.08335	0	1	10691000	+		23147	8636	11496	11549	26566	26566					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2488281130791	5	304.403083	1516.97903	1.4386	0.00043792	3.0093	0.00091603	4.4479	0.0013539	304.60404813594636	44.801	0.1221	46.167	46.088	46.21	1.3653					5	3	2	0	0	0	0.14606	1	18768	18768		0.08335	0	1	314570	+		23148	8636	11496	11549	26567	26567					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2485229372978	5	304.403083	1516.97903	1.3628	0.00041485	-0.2366	-7.2022E-05	1.1262	0.00034283	304.40304619799156	40.276	1.2834	42.138	41.646	42.929	1.8624					89	40	3	0	0	0	0.14606	1	16731	16731		0.08335	0	1	14236000	+		23149	8636	11496	11549	26568	26568					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2480956912041	5	304.403083	1516.97903	0.62588	0.00019052	0.6494	0.00019768	1.2753	0.0003882	304.4033564142067	38.58	1.288	40.416	40.178	41.466	1.8366					95	40	3	0	0	0	0.14606	1	16552	16552		0.08335	0	1	7469300	+		23150	8636	11496	11549	26569	26569					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2484619021416	5	304.403083	1516.97903	1.1705	0.0003563	0.087497	2.6634E-05	1.258	0.00038293	304.40308944548894	41.478	1.1468	43.371	42.928	44.075	1.8927					92	36	3	0	0	0	0.14606	1	17577	17577		0.08335	0	1	8087900	+		23151	8636	11496	11549	26570	26570					0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	759.496793	1516.97903	1.3414	0.0010188	-0.09532	-7.2395E-05	1.246	0.00094636	759.4963331680941	105.8	0.11676	105.8	105.74	105.86	0	-0.057243	0.0013106	NaN	0	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20391000	+		23152	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	759.496793	1516.97903	2.7311	0.0020742	-0.94273	-0.000716	1.7883	0.0013582	759.4953507889506	105.77	0.11986	105.83	105.76	105.88	0.05455	-0.032012	2.3368E-05	NaN	0	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36174000	+		23153	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		5	304.403083	1516.97903	1.0899	0.00033178	0.83617	0.00025453	1.9261	0.00058631	304.4033152008602	42.963	1.1097	43.286	42.978	44.087	0.32389	-0.050272	0.00039435	NaN	0.08335	90	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6985200	+		23154	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		5	304.403083	1516.97903	1.0884	0.00033131	1.4044	0.00042751	2.4928	0.00075882	304.4035310172651	42.147	1.0224	42.467	42.041	43.063	0.32058	0.16461	0.00075644	NaN	0.08335	64	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14858000	+		23155	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	759.496793	1516.97903	2.5034	0.0019013	-1.1273	-0.00085617	1.3761	0.0010451	759.4955279773257	105.76	0.14832	105.91	105.83	105.98	0.15859	0.053491	-0.00025697	NaN	0	27	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	137940000	+		23156	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		5	304.403083	1516.97903	0.74463	0.00022667	0.69334	0.00021105	1.438	0.00043772	304.40317971935497	42.013	1.3139	43.353	42.826	44.14	1.3399	0.016071	0.00017696	NaN	0.08335	82	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4755000	+		23157	8636	11496	11549							0.2412224699003218
NKRKRYRKKIK	11	Unmodified	_NKRKRYRKKIK_					0	0	0			REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	REV__KMT2C|p.C4432Lfs*27|1|0.15|ENSG00000055609|chr7:152148633-152148634|-/AGCCTGTAATCCCAGCTACTCGGGAGGCTGAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	759.496793	1516.97903	2.7552	0.0020925	-1.7382	-0.0013202	1.017	0.00077237	759.4949667596507	105.73	0.14992	105.9	105.82	105.97	0.16679	0.035765	-0.0011849	NaN	0	24	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85426000	+		23158	8636	11496	11549							0.2412224699003218
NKRLAANSLLL	11	Unmodified	_NKRLAANSLLL_					0	0	0		tr|A0A7D6VSE8|A0A7D6VSE8_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08970PE=3SV=1	tr|A0A7D6VSE8|A0A7D6VSE8_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08970PE=3SV=1	tr|A0A7D6VSE8|A0A7D6VSE8_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_08970PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	404.5830871462822	3	404.918945	1211.73501	0.69533	0.00028155	-4.2242	-0.0017105	-3.5288	-0.0014289	404.9180045796319	91.803	0.37827	91.803	91.693	92.071	0					16	11	2	0	0	0	0.14606	1	38375	38375		1.2148	0.25256	1	668780			23159	16865	11497	11550	26571	26571					0.13760743105467554
NKRLIKIL	8	Unmodified	_NKRLIKIL_					0	0	0			REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3482238650322	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.396	1	92.396	91.896	92.896	0								0	0	0	1.0178	1	38610	38610		0.69038	0	1		+		23160	15384	11498	11551	26572	26572					0.18231195744567685
NKRLIKIL	8	Unmodified	_NKRLIKIL_					0	0	0			REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3497802615166	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.656	1	95.656	95.156	96.156	0								0	0	0	1.0178	1	39982	39982		0.69038	0	1		+		23161	15384	11498	11551	26573	26573					0.18231195744567685
NKRLIKIL	8	Unmodified	_NKRLIKIL_					0	0	0			REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	REV__tr|A0A7D6VQI0|A0A7D6VQI0_9CLOTEnergy-couplingfactortransporterATP-bindingproteinEcfA2OS=ClostridiumintestinaleOX=36845GN=HZF06_21135PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3506042361259	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.163	1	96.163	95.663	96.663	0								0	0	0	1.0178	1	40203	40203		0.69038	0	1		+		23162	15384	11498	11551	26574	26574					0.18231195744567685
NKRLVFEKF	9	Unmodified	_NKRLVFEKF_					0	0	0		ENSG00000187231|ENST00000428443|SESTD1	ENSG00000187231|ENST00000428443|SESTD1	ENSG00000187231|ENST00000428443|SESTD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2336303591728	3	394.232752	1179.67643	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.236	1	25.92	25.42	26.42	1.6845								0	0	0	0.42693	1	10121	10121		0.96228	0.26461	1				23163	4821	11499	11552	26575	26575					0.0937768653097919
NKRMMKRF	8	Unmodified	_NKRMMKRF_					0	0	0		ENST00000511141.1_1_4:153717542-153717788:-|nuORF	ENST00000511141.1_1_4:153717542-153717788:-|nuORF	ENST00000511141.1_1_4:153717542-153717788:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1015502810478	3	370.872284	1109.59502	-1.2912	-0.00047887	-2.0921	-0.00077592	-3.3833	-0.0012548	370.8717370675901	25.59	0.27697	25.59	25.41	25.687	0					15	8	3	0	0	0	2.3239	1	10653	10653		0.40072	0	1	610470			23164	7031	11500	11553	26576	26576					0.044609642957311735
NKRMRLRG	8	Unmodified	_NKRMRLRG_					0	0	0			REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF;REV__nc|ENSG00000083067|Q9HCF6-10|TRPM3	REV__ENST00000560801.5_2_15:31320559-31354823:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2083007693291	3	344.206543	1029.5978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.032	1	97.032	96.532	97.532	0								0	0	0	1.0178	1	40564	40564		0.40072	0	1		+		23165	9895;8826	11501	11554	26577	26577					0.08418555744924561
NKRQRKIIKT	10	Unmodified	_NKRQRKIIKT_					0	0	0			REV__nc|ENSG00000171310|Q9NPF2-2|CHST11	REV__nc|ENSG00000171310|Q9NPF2-2|CHST11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	322.1862975955009	4	321.961023	1283.81499	-2.0348	-0.00065513	0.07519	2.4208E-05	-1.9596	-0.00063092	321.96123446972956	44.949	2.2921	44.949	43.365	45.657	0					102	72	2	0	0	0	0.12561	1	19038	19038		0.13989	0	1	2892900	+		23166	11019	11502	11555	26578	26578					0.18443229499303015
NKRQSFRKG	9	Unmodified	_NKRQSFRKG_					0	0	0			REV__ENSG00000156853|ENST00000287461|ZNF689	REV__ENSG00000156853|ENST00000287461|ZNF689	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2167541384697	3	374.215984	1119.62612	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.155	1	93.323	92.823	93.823	0.16835								0	0	0	0.42693	1	39002	39002		0.96228	0	1		+		23167	10520	11503	11556	26579	26579					0.07109576925836336
NKRQSYDI	8	Unmodified	_NKRQSYDI_					0	0	0		ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1	ENSG00000142453|ENST00000327064|CARM1	ENSG00000142453|ENST00000327064|CARM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	342.1552917361259	3	341.845446	1022.51451	1.4754	0.00050435	-0.42567	-0.00014551	1.0497	0.00035884	341.8447005810043	78.676	0.49808	79.943	79.755	80.253	1.2668					20	15	2	0	0	0	2.3239	1	33128	33128		0.35063	0.081612	1	949250			23168	2994	11504	11557	26580	26580					0.004150977780341236
NKRRHPVTV	9	Unmodified	_NKRRHPVTV_					0	0	0		ZFYVE1|p.K171Ifs*7|1|0.04|ENSG00000165861|chr14:72998287-72998288|-/A|frameshift_variant;nc|ENSG00000165861|Q9HBF4-3|ZFYVE1;ENSG00000165861|ENST00000556143|ZFYVE1	ZFYVE1|p.K171Ifs*7|1|0.04|ENSG00000165861|chr14:72998287-72998288|-/A|frameshift_variant	ZFYVE1|p.K171Ifs*7|1|0.04|ENSG00000165861|chr14:72998287-72998288|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8303710818291	2	553.830706	1105.64686	2.4367	0.0013495	-0.9516	-0.00052702	1.4851	0.00082248	553.8300287508691	73.86	1.3555	74.185	73.912	75.267	0.32494					102	42	3	0	0	0	0.85019	1	31128	31128		0.52476	0.52476	1	2448400			23169	3863	11505	11558	26581	26581					0.09826167305504896
NKRRITPK	8	Unmodified	_NKRRITPK_					0	0	0			REV__ENST00000350051.7_1_17:76212860-76219738:+|nuORF	REV__ENST00000350051.7_1_17:76212860-76219738:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	338.2181274294853	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.801	1	91.991	91.491	92.491	0.19042								0	0	0	1.0178	1	38446	38446		0.40072	0	1		+		23170	8279	11506	11559	26582	26582					0.12479666419540081
NKRRITPK	8	Unmodified	_NKRRITPK_					0	0	0			REV__ENST00000350051.7_1_17:76212860-76219738:+|nuORF	REV__ENST00000350051.7_1_17:76212860-76219738:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2168762087822	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.102	1	48.073	47.573	48.573	1.9703								0	0	0	1.0178	1	19314	19314		0.40072	0	1		+		23171	8279	11506	11559	26583	26583					0.12479666419540081
NKRRKRRK	8	Unmodified	_NKRRKRRK_					0	0	0			REV__nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	REV__nc|ENSG00000163935|Q9UHJ3-2|SFMBT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.2570373415947	3	381.254885	1140.74283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.503	1	36.805	36.305	37.305	0.30197								0	0	0	1.0178	1	15350	15350		1.4819	0	1		+		23172	10706	11507	11560	26584	26584					0.17808359936248053
NKRRRGCPIL	10	Unmodified	_NKRRRGCPIL_					0	0	0		ENST00000473074.1_1_1:113244164-113245337:-|nuORF;ENSG00000155366|ENST00000339083|RHOC	ENST00000473074.1_1_1:113244164-113245337:-|nuORF	ENST00000473074.1_1_1:113244164-113245337:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.2446472048759	3	404.908386	1211.70333	1.4188	0.00057448	1.2424	0.00050305	2.6612	0.0010775	405.24360017922976	83.534	0.3747	84.722	84.516	84.89	1.1879					17	11	2	0	0	0	0.8974	1	35084	35084		1.7423	0	1	837110			23173	3417	11508	11561	26585	26585					0.10594471870535926
NKRSIVTV	8	Unmodified	_NKRSIVTV_					0	0	0			REV__nc|ENSG00000136059|O15195-2|VILL	REV__nc|ENSG00000136059|O15195-2|VILL	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1911498904228	3	306.190665	915.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.454	1	68.343	67.843	68.843	1.8889								0	0	0	1.0178	1	27876	27876		1.4819	0	1		+		23174	9970	11509	11562	26586	26586					0.08901180025725353
NKRSRRRRKRA	11	Unmodified	_NKRSRRRRKRA_					0	0	0			REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1017639040947	4	371.737083	1482.91923	-0.36856	-0.00013701	0.55737	0.0002072	0.18882	7.019E-05	371.7373251377165	51.759	1.9087	51.759	50.85	52.759	0					78	60	2	0	0	0	0.14606	1	21998	21998		0.073264	0.073264	1	1121700	+		23175	8471	11510	11563	26587	26587					0.1970836909938498
NKRSRRRRKRA	11	Unmodified	_NKRSRRRRKRA_					0	0	0			REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.3159667849541	3	495.313685	1482.91923	3.2441	0.0016069	1.9228	0.00095238	5.1669	0.0025592	495.3145144366815	105.73	0.12915	105.9	105.82	105.95	0.16679					19	6	4	0	0	0	1.0402	1	45052	45052		0.094841	0.021578	1	32922000	+		23176	8471	11510	11563	26588	26588					0.1970836909938498
NKRSRRRRKRA	11	Unmodified	_NKRSRRRRKRA_					0	0	0			REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	495.313685	1482.91923	0.88272	0.00043722	5.8909	0.0029179	6.7737	0.0033551	495.65022231975763	105.82	0.097664	105.82	105.76	105.86	0	-0.045258	0.0044599	NaN	0.094841	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10799000	+		23177	8471	11510	11563							0.1970836909938498
NKRSRRRRKRA	11	Unmodified	_NKRSRRRRKRA_					0	0	0			REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	495.313685	1482.91923	3.3961	0.0016822	3.1286	0.0015497	6.5248	0.0032318	495.6492006523116	105.78	0.10062	105.84	105.78	105.88	0.05455	-0.032221	0.0003553	NaN	0.094841	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8693100	+		23178	8471	11510	11563							0.1970836909938498
NKRSRRRRKRA	11	Unmodified	_NKRSRRRRKRA_					0	0	0			REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	REV__EHMT1|p.K451N|1|0.09|ENSG00000181090|chr9:137754275-137754275|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	495.313685	1482.91923	3.2441	0.0016069	1.9228	0.00095238	5.1669	0.0025592	495.3145144366815	105.73	0.12915	105.9	105.82	105.95	0.16679	0.03209	-0.0014365	NaN	0.094841	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32922000	+		23179	8471	11510	11563							0.1970836909938498
NKRVRPLAR	9	Unmodified	_NKRVRPLAR_					0	0	0		ENST00000486354.1_1_10:5488686-5494790:+|nuORF;nc|ENSG00000173848|Q7Z628-2|NET1;ENSG00000173848|ENST00000355029|NET1	ENST00000486354.1_1_10:5488686-5494790:+|nuORF	ENST00000486354.1_1_10:5488686-5494790:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1016418337822	3	370.571991	1108.69414	2.4059	0.00089157	-2.555	-0.00094682	-0.1491	-5.5251E-05	370.5708208624728	86.075	0.42266	86.327	86.068	86.491	0.25227					35	13	3	0	0	0	0.11948	1	36052	36052		0.23584	0.23584	1	3853300			23180	4303	11511	11564	26589	26589					0.14414446576506634
NKRVVIFYI	9	Unmodified	_NKRVVIFYI_					0	0	0			REV__ENSG00000106688|ENST00000262352|SLC1A1	REV__ENSG00000106688|ENST00000262352|SLC1A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1535217165947	3	384.569365	1150.68626	1.8792	0.00072268	0.36501	0.00014037	2.2442	0.00086305	384.5696255913202	78.305	1.0086	79.572	79.184	80.193	1.2668					73	32	3	0	0	0	0.11941	1	32853	32853		0.23584	0.028987	1	4246400	+		23181	9213	11512	11565	26590	26590					0.116948745363743
NKRYARKM	8	Unmodified	_NKRYARKM_					0	0	0			REV__tr|A0A7D7ADG9|A0A7D7ADG9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22870PE=4SV=1	REV__tr|A0A7D7ADG9|A0A7D7ADG9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22870PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	356.2041198611259	3	356.202799	1065.58657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.418	1	86.577	86.077	87.077	1.159								0	0	0	1.0178	1	35864	35864		0.40072	0	1		+		23182	15908	11513	11566	26591	26591					0.05639733650764356
NKSCEHWWL	9	Unmodified	_NKSCEHWWL_					0	0	0			REV__ENST00000507820.5_3_4:1895621-1902427:+|nuORF	REV__ENST00000507820.5_3_4:1895621-1902427:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1806518435478	3	401.518564	1201.53386	2.0312	0.00081556	-0.85104	-0.00034171	1.1801	0.00047385	401.5183796217555	77.718	0.22105	78.999	78.856	79.077	1.2809					10	6	2	0	0	0	0.11948	1	32566	32566		0	0	1	382550	+		23183	13549	11514	11567	26592	26592					-0.05884269202715586
NKSGPDEN	8	Unmodified	_NKSGPDEN_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	430.8894836306572	2	430.690864	859.367175	1.0934	0.00047092	-3.0971	-0.0013339	-2.0037	-0.00086296	430.68935545991906	65.886	0.38235	65.886	65.676	66.058	0					27	11	3	0	0	0	2.3239	1	27383	27383		0.69038	0	1	1779100	+		23184	9738	11515	11568	26593	26593					-0.06813418826754969
NKSKKIVHA	9	Unmodified	_NKSKKIVHA_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2130920290947	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.84	1	32.84	32.34	33.34	0								0	0	0	0.42693	1	13759	13759		0.96228	0.56156	1		+		23185	11236	11516	11569	26594	26594					0.10804844325411977
NKSKKIVHA	9	Unmodified	_NKSKKIVHA_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2122375369072	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.969	1	32.969	32.469	33.469	0								0	0	0	0.42693	1	13812	13812		2.4985	1.427	1		+		23186	11236	11516	11569	26595	26595					0.10804844325411977
NKSKKIVHA	9	Unmodified	_NKSKKIVHA_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2121154665947	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.083	1	33.083	32.583	33.583	0								0	0	0	0.42693	1	13862	13862		0.96228	0.56156	1		+		23187	11236	11516	11569	26596	26596					0.10804844325411977
NKSKKIVHA	9	Unmodified	_NKSKKIVHA_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2123901247978	3	342.213581	1023.61891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.208	1	33.208	32.708	33.708	0								0	0	0	0.42693	1	13916	13916		0.96228	0	1		+		23188	11236	11516	11569	26597	26597					0.10804844325411977
NKSKKIVHA	9	Unmodified	_NKSKKIVHA_					0	0	0			REV__nc|ENSG00000178053|P58340-2|MLF1	REV__nc|ENSG00000178053|P58340-2|MLF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2118713259697	3	342.213581	1023.61891	0.59931	0.00020509	-2.1245	-0.00072702	-1.5251	-0.00052192	342.2122666549247	28.808	0.64277	29.088	28.737	29.38	0.27929					62	20	4	0	0	0	0.847	1	12092	12092		0.96228	0.72643	1	2395100	+		23189	11236	11516	11569	26598	26598					0.10804844325411977
NKSKSGVG	8	Unmodified	_NKSKSGVG_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.0829040408134	2	388.716685	775.418816	-0.028513	-1.1083E-05	0.0080856	3.143E-06	-0.020427	-7.9404E-06	388.7165570458068	65.222	0.28004	65.222	65.072	65.352	0					13	8	2	0	0	0	2.3239	1	27176	27176		0	0	1	449310			23190	711	11517	11570	26599	26599					0.022123696578205454
NKSKSGVG	8	Unmodified	_NKSKSGVG_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	388.716685	775.418816	1.9084	0.00074181	-1.7143	-0.00066638	0.19405	7.543E-05	388.7160837477423	65.142	0.3197	65.469	65.258	65.578	0.32689	-0.03857	-0.00043737	NaN	0	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	868260			23191	711	11517	11570							0.022123696578205454
NKSKSGVG	8	Unmodified	_NKSKSGVG_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	388.716685	775.418816	2.1061	0.00081869	-3.3385	-0.0012977	-1.2324	-0.00047905	388.7150996013865	64.185	0.30639	65.592	65.433	65.74	1.4071	0.084032	-0.0017001	NaN	0	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	548310			23192	711	11517	11570							0.022123696578205454
NKSKSGVG	8	Unmodified	_NKSKSGVG_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	388.716685	775.418816	2.7344	0.0010629	-1.3703	-0.00053267	1.364	0.00053022	388.7161154159543	63.82	0.27564	65.748	65.551	65.827	1.928	0.24004	-0.00016993	NaN	0	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	390320			23193	711	11517	11570							0.022123696578205454
NKSLGKVKL	9	Unmodified	_NKSLGKVKL_					0	0	0			REV__ENST00000560936.2_1_15:60688058-60688154:-|nuORF	REV__ENST00000560936.2_1_15:60688058-60688154:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.1582214236259	3	329.550082	985.628415	-1.8243	-0.00060121	0.054823	1.8067E-05	-1.7695	-0.00058315	329.550042124711	44.223	1.8209	44.223	43.302	45.123	0					122	57	3	0	0	0	0.11941	1	18155	18155		0.23584	0	1	5317100	+		23194	13898	11518	11571	26600	26600					0.13502612610943743
NKSRLEKP	8	Unmodified	_NKSRLEKP_					0	0	0		tr|A0A7D6W0P3|A0A7D6W0P3_9CLOTDNApolymeraseIIIsubunitgamma/tauOS=ClostridiumintestinaleOX=36845GN=dnaXPE=3SV=1	tr|A0A7D6W0P3|A0A7D6W0P3_9CLOTDNApolymeraseIIIsubunitgamma/tauOS=ClostridiumintestinaleOX=36845GN=dnaXPE=3SV=1	tr|A0A7D6W0P3|A0A7D6W0P3_9CLOTDNApolymeraseIIIsubunitgamma/tauOS=ClostridiumintestinaleOX=36845GN=dnaXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2870971560478	2	486.285266	970.555979	3.3649	0.0016363	0.39643	0.00019278	3.7614	0.0018291	486.28539856691623	89.408	0.41567	89.631	89.36	89.775	0.22359					22	12	2	0	0	0	0.8909	1	37441	37441		2.0598	0	1	2513900			23195	17016	11519	11572	26601	26601					0.06952278537380607
NKSVLLFS	8	Unmodified	_NKSVLLFS_					0	0	0			REV__chr8:127290060-127311920|177|24.08|0.02|9.95|-|0|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|9	REV__chr8:127290060-127311920|177|24.08|0.02|9.95|-|0|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|9	MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1811096072197	3	303.179766	906.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.8	1	92.166	91.666	92.666	1.366								0	0	0	1.0178	1	38238	38238		0.40072	0	1		+		23196	8341	11520	11573	26602	26602					0.060469729028682195
NKSWYLEE	8	Unmodified	_NKSWYLEE_					0	0	0		nc|ENSG00000089472|Q9BQS7-4|HEPH;nc|ENSG00000089472|Q9BQS7-2|HEPH;ENSG00000089472|ENST00000343002|HEPH;nc|ENSG00000089472|Q9BQS7-3|HEPH	nc|ENSG00000089472|Q9BQS7-4|HEPH	nc|ENSG00000089472|Q9BQS7-4|HEPH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	356.2793762087822	3	356.838068	1067.49238	0.57575	0.00020545	-0.93341	-0.00033308	-0.35766	-0.00012763	356.838763644742	67.195	0.64601	68.583	68.184	68.83	1.3888					24	20	2	0	0	0	2.3239	1	28206	28206		0.40072	0	1	762830			23197	1126	11521	11574	26603	26603					-0.03867126690374789
NKTAEEVSE	9	Unmodified	_NKTAEEVSE_					0	0	0			REV__ENSG00000128849|ENST00000281282|CGNL1	REV__ENSG00000128849|ENST00000281282|CGNL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.1600219607353	3	336.161099	1005.46147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.056	1	64.056	63.556	64.556	0								0	0	0	0.42693	1	26707	26707		1.0715	0	1		+		23198	9740	11522	11575	26604	26604					-0.041043247952757156
NKTAGNDGKGT	11	Unmodified	_NKTAGNDGKGT_					0	0	0		IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant;IGF2R|p.S1819Kfs*18|1|0.12|ENSG00000197081|chr6:160078337-160078338|-/CAAGGCTCATCTGACCCCTAGGAGTT|frameshift_variant;IGF2R|p.A2191Ffs*31|1|0.04|ENSG00000197081|chr6:160090018-160090019|-/TTTTTAGTAGAGACGGGGTTTCACCATGTTG|frameshift_variant;IGF2R|p.S2210Ffs*137|1|0.18|ENSG00000197081|chr6:160090076-160090077|-/TTTGTCCCACCCGAGGTGTTCAAGCAGCCTGG|frameshift_variant;ENSG00000197081|ENST00000356956|IGF2R	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0715515017509	3	354.843993	1061.51015	2.9102	0.0010327	-0.75759	-0.00026883	2.1526	0.00076384	354.84432756618907	90.664	0.44724	91.646	91.398	91.846	0.98156					21	13	2	0	0	0	0.14606	1	38163	38163		2.2527	0	1	367710			23199	4979	11523	11576	26605	26605					-0.01814411435520924
NKTALLLG	8	Unmodified	_NKTALLLG_					0	0	0			REV__nc|ENSG00000103549|O75150-3|RNF40	REV__nc|ENSG00000103549|O75150-3|RNF40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2614013552666	2	415.260728	828.506903	1.5279	0.00063448	2.8739	0.0011934	4.4018	0.0018279	415.2618080170901	86.19	0.42467	86.19	85.914	86.339	0					37	13	3	0	0	0	0.8909	1	35911	35911		2.0598	0	1	3164700	+		23200	9112	11524	11577	26606	26606					0.08578990248429363
NKTEGDQMV	9	Unmodified	_NKTEGDQMV_					0	0	0			REV__tr|A0A7D6VR49|A0A7D6VR49_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01045PE=4SV=1	REV__tr|A0A7D6VR49|A0A7D6VR49_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1589538455009	3	341.158813	1020.45461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.659	1	78.968	78.468	79.468	0.30933								0	0	0	0.42693	1	32885	32885		1.0715	0.67075	1		+		23201	15403	11525	11578	26607	26607					-0.054799609475026045
NKTILLTT	8	Unmodified	_NKTILLTT_					0	0	0		ENST00000519732.5_1_17:67144970-67171813:-|nuORF;ENST00000522406.5_1_17:67144970-67178294:-|nuORF;nc|ENSG00000154263|Q8WWZ4-2|ABCA10;ENSG00000154263|ENST00000690296|ABCA10	ENST00000519732.5_1_17:67144970-67171813:-|nuORF	ENST00000519732.5_1_17:67144970-67171813:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2797119021416	2	452.279118	902.543683	3.6696	0.0016597	-2.9229	-0.001322	0.74673	0.00033773	452.2775518799456	72.974	0.74564	74.304	73.792	74.537	1.3297					43	23	3	0	0	0	0.89178	1	30587	30587		0.69038	0	1	2628500			23202	3381	11526	11579	26608	26608					0.0885124207430863
NKTKIKKV	8	Unmodified	_NKTKIKKV_					0	0	0		tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2183105349541	3	320.218443	957.633501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.508	1	36.81	36.31	37.31	0.30197								0	0	0	1.0178	1	15352	15352		1.6526	0.45928	1				23203	17290	11527	11580	26609	26609					0.15298916473557256
NKTKIKKVYLK	11	Unmodified	_NKTKIKKVYLK_					0	0	0		tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4768859744072	4	341.47624	1361.87586	0.53435	0.00018247	1.4745	0.00050351	2.0089	0.00068598	341.4767957231726	27.78	0.65491	28.051	27.617	28.272	0.27119					49	21	3	0	0	0	1.0254	3	11658	11567;11611;11658		2.2527	1.7468	1	9295100			23204	17290	11528	11581	26610;26611;26612	26612					0.2093932175887403
NKTKIKKVYLK	11	Unmodified	_NKTKIKKVYLK_					0	0	0		tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	454.9674255251884	3	454.965895	1361.87586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.648	1	25.889	25.389	26.389	1.241								0	0	0	0.63775	1	10310	10310		0.073264	0.073264	1				23205	17290	11528	11581	26613	26613					0.2093932175887403
NKTKIKKVYLK	11	Unmodified	_NKTKIKKVYLK_					0	0	0		tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	tr|A0A7D7A4T5|A0A7D7A4T5_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.4769164919853	4	341.47624	1361.87586	0.18013	6.151E-05	2.1466	0.000733	2.3267	0.00079451	341.4769216109376	26.328	1.837	28.075	27.553	29.39	1.747					180	60	4	0	0	0	0.9945	6	11083	10931;10980;11034;11083;11231;11313		4.1166	4.0218	1	24626000			23206	17290	11528	11581	26614;26615;26616;26617;26618;26619	26617					0.2093932175887403
NKTKIKVVKN	10	Unmodified	_NKTKIKVVKN_					0	0	0		tr|A0A553SNS3|A0A553SNS3_NIACIProteinRecAOS=NialliacirculansOX=1397GN=recAPE=3SV=1	tr|A0A553SNS3|A0A553SNS3_NIACIProteinRecAOS=NialliacirculansOX=1397GN=recAPE=3SV=1	tr|A0A553SNS3|A0A553SNS3_NIACIProteinRecAOS=NialliacirculansOX=1397GN=recAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.4955322146416	3	391.255557	1170.74484	1.3163	0.00051501	-0.77763	-0.00030425	0.53867	0.00021076	391.2561858230528	42.125	0.66081	43.464	43.26	43.921	1.3399					35	20	2	0	0	0	0.12557	1	17806	17806		1.5923	0.13716	1	456620			23207	16434	11529	11582	26620	26620					0.16629931110855978
NKTKKKKS	8	Unmodified	_NKTKKKKS_					0	0	0		ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	ENSG00000125686|ENST00000300651|MED1	MSMS	GG20161007_CRH_Patient100_A02_02	2	321.2095214724541	3	321.209948	960.608014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.096	1	61.425	60.925	61.925	0.32974								0	0	0	1.0178	1	25598	25598		0.40072	0	1				23208	2271	11530	11583	26621	26621					0.12613441951134519
NKTKKSLVL	9	Unmodified	_NKTKKSLVL_					0	0	0		ENST00000301923.13_2_22:40724958-40725066:+|nuORF	ENST00000301923.13_2_22:40724958-40725066:+|nuORF	ENST00000301923.13_2_22:40724958-40725066:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2253906130791	3	344.225486	1029.65463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.773	1	20.832	20.332	21.332	1.0585								0	0	0	0.42693	1	8234	8234		1.0715	0	1				23209	5761	11531	11584	26622	26622					0.140988817824109
NKTKLFERF	9	Unmodified	_NKTKLFERF_					0	0	0			REV__ENST00000468963.1_1_9:139301473-139302406:-|nuORF	REV__ENST00000468963.1_1_9:139301473-139302406:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.8924438357353	3	394.892507	1181.65569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.72	1	44.641	44.141	45.141	1.9211								0	0	0	0.41189	1	17902	17902		7.609	4.0219	1		+		23210	10792	11532	11585	26623	26623					0.07213096151303944
NKTKRYTIY	9	Unmodified	_NKTKRYTIY_					0	0	0			REV__tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	REV__tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2218505740166	3	396.224146	1185.65061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.688	1	85.326	84.826	85.826	1.6379								0	0	0	0.42693	1	35102	35102		1.0715	0.3738	1		+		23211	15163	11533	11586	26624	26624					0.06520792288711164
NKTKRYTIY	9	Unmodified	_NKTKRYTIY_					0	0	0			REV__tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	REV__tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2245056033134	3	396.224146	1185.65061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.471	1	86.067	85.567	86.567	1.5962								0	0	0	0.42693	1	35429	35429		0.96228	0	1		+		23212	15163	11533	11586	26625	26625					0.06520792288711164
NKTLLDCKERE	11	Unmodified	_NKTLLDCKERE_					0	0	0			REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	REV__ENST00000380121.7_1_13:33010521-33020605:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	449.6235229372978	3	450.234493	1347.68165	1.5156	0.00068239	-0.4911	-0.00022111	1.0245	0.00046128	450.23394705052607	95.935	0.26292	95.935	95.773	96.035	0					14	8	2	0	0	0	0.14606	1	40095	40095		0.92553	0.22787	1	4395000	+		23213	12754	11534	11587	26626	26626					0.02171577540616454
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2486144900322	3	304.535661	910.585153	-2.1677	-0.00066015	4.2942	0.0013077	2.1264	0.00064757	304.53721200554577	44.329	0.82228	44.329	43.587	44.409	0					35	25	2	0	0	0	2.3239	1	18440	18440		0	0	1	333460			23214	17201	11535	11588	26627	26627					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2490417361259	3	304.535661	910.585153	-2.1493	-0.00065453	3.6991	0.0011265	1.5498	0.00047198	304.53691901989157	44.565	0.15386	44.565	44.502	44.656	0					6	4	2	0	0	0	2.3239	1	18673	18673		0.40072	0	1	169190			23215	17201	11535	11588	26628	26628					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2486450076103	3	304.535661	910.585153	0.90616	0.00027596	2.8541	0.00086918	3.7603	0.0011451	304.53719266647397	38.783	0.44693	39.091	38.827	39.274	0.30857					18	14	2	0	0	0	2.3239	1	16241	16241		0.40072	0	1	611700			23216	17201	11535	11588	26629	26629					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2479736208916	3	304.535661	910.585153	0.69099	0.00021043	1.0901	0.00033199	1.7811	0.00054242	304.53596101702476	34.806	0.58175	35.105	34.703	35.285	0.29941					49	29	2	0	0	0	2.3239	1	14459	14459		0.40072	0	1	2398200			23217	17201	11535	11588	26630	26630					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5362731814384	3	304.535661	910.585153	-0.086109	-2.6223E-05	2.9236	0.00089034	2.8375	0.00086412	304.53656840872696	26.584	1.1215	27.855	27.466	28.587	1.2715					54	36	2	0	0	0	0.89178	1	11228	11228		0.40072	0	1	4495300			23218	17201	11535	11588	26631	26631					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	304.8699828982353	3	304.535661	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.012	1	34.837	34.337	35.337	1.8246								0	0	0	1.0178	1	13838	13838		1.6526	0	1				23219	17201	11535	11588	26632	26632					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2476379275322	3	304.535661	910.585153	0.071851	2.1881E-05	2.7122	0.00082597	2.7841	0.00084785	304.53648336890865	37.739	0.38579	39.56	39.224	39.61	1.8202					17	12	2	0	0	0	2.3239	1	15815	15815		0.40072	0	1	759430			23220	17201	11535	11588	26633	26633					0.1262842283365444
NKTPIILI	8	Unmodified	_NKTPIILI_					0	0	0		tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	tr|A0A7D6ZYW0|A0A7D6ZYW0_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03965PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2486144900322	3	304.535661	910.585153	1.3268	0.00040406	-0.71399	-0.00021744	0.6128	0.00018662	304.53495663177154	41.136	0.57119	43.029	42.579	43.15	1.8927					25	17	2	0	0	0	2.3239	1	17145	17145		0.40072	0	1	253700			23221	17201	11535	11588	26634	26634					0.1262842283365444
NKTPKKFR	8	Unmodified	_NKTPKKFR_					0	0	0			REV__WNT2|p.L268R|1|0.07|ENSG00000105989|chr7:117297662-117297662|A/C|missense_variant	REV__WNT2|p.L268R|1|0.07|ENSG00000105989|chr7:117297662-117297662|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2105895876884	3	340.210059	1017.60835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.848	1	51.176	50.676	51.676	0.32824								0	0	0	1.0178	1	21303	21303		0.40072	0	1		+		23222	9199	11536	11589	26635	26635					0.10024861670979135
NKTRLILT	8	Unmodified	_NKTRLILT_					0	0	0			REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2077514529228	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.118	1	86.277	85.777	86.777	1.159								0	0	0	1.0178	1	35718	35718		1.4819	0	1		+		23223	13058	11537	11590	26636	26636					0.11662039576845018
NKTRLILT	8	Unmodified	_NKTRLILT_					0	0	0			REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2065612673759	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.886	1	85.524	85.024	86.024	1.6379								0	0	0	1.0178	1	35183	35183		1.4819	0	1		+		23224	13058	11537	11590	26637	26637					0.11662039576845018
NKTRLILT	8	Unmodified	_NKTRLILT_					0	0	0			REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	REV__ENST00000437230.5_1_3:23934575-23934626:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2081481814384	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.655	1	86.251	85.751	86.751	1.5962								0	0	0	1.0178	1	35506	35506		1.4819	0	1		+		23225	13058	11537	11590	26638	26638					0.11662039576845018
NKTRRLRR	8	Unmodified	_NKTRRLRR_					0	0	0			REV__ENST00000498967.3_2_12:124068895-124069045:-|nuORF	REV__ENST00000498967.3_2_12:124068895-124069045:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	367.0506164431572	3	367.23549	1098.68464	0.18376	6.7482E-05	-0.16944	-6.2225E-05	0.014313	5.2563E-06	367.2352700246299	55.033	0.26761	57.001	56.809	57.076	1.9684					11	8	2	0	0	0	2.3239	1	23034	23034		0	0	1	1510300	+		23226	13498	11538	11591	26639	26639					0.1392467829095949
NKTRRNRA	8	Unmodified	_NKTRRNRA_					0	0	0			REV__ENST00000567636.1_1_18:30091864-30091924:+|nuORF	REV__ENST00000567636.1_1_18:30091864-30091924:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.2011901736259	3	339.200446	1014.57951	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.131	1	37.436	36.936	37.936	0.30497								0	0	0	1.0178	1	15615	15615		0.40072	0	1		+		23227	13943	11539	11592	26640	26640					0.07280137094551264
NKTSYACD	8	Unmodified	_NKTSYACD_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1276428103447	3	301.128854	900.364732	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.368	1	58.368	57.868	58.868	0								0	0	0	1.0178	1	24348	24348		0.40072	0	1		+		23228	9442	11540	11593	26641	26641					-0.0894359055608902
NKTYLIRRN	9	Unmodified	_NKTYLIRRN_					0	0	0			REV__tr|A0A7D6ZSY8|A0A7D6ZSY8_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17870PE=4SV=1	REV__tr|A0A7D6ZSY8|A0A7D6ZSY8_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17870PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2279846072197	3	393.231523	1176.67274	0.35961	0.00014141	-3.5137	-0.0013817	-3.1541	-0.0012403	393.2294137506669	91.832	0.75817	91.832	91.5	92.258	0					35	23	3	0	0	0	0.83753	1	38473	38473		0.96228	0	1	1178300	+		23229	15711	11541	11594	26642	26642					0.09147016757151505
NKTYLIRRN	9	Unmodified	_NKTYLIRRN_					0	0	0			REV__tr|A0A7D6ZSY8|A0A7D6ZSY8_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17870PE=4SV=1	REV__tr|A0A7D6ZSY8|A0A7D6ZSY8_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17870PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	393.231523	1176.67274	3.5695	0.0014036	-4.6579	-0.0018316	-1.0884	-0.00042799	393.22931239988617	91.139	0.60404	92.12	91.749	92.353	0.98157	0.1441	-0.00043465	NaN	0.96228	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	550290	+		23230	15711	11541	11594							0.09147016757151505
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2278015017509	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.841	1	49.841	49.341	50.341	0								0	0	0	0.42693	1	20800	20800		1.0715	0	1		+		23231	14857	11542	11595	26643	26643					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2262451052666	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.895	1	50.895	50.395	51.395	0								0	0	0	0.42693	1	21228	21228		1.0715	0	1		+		23232	14857	11542	11595	26644	26644					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2447997927666	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.44	1	111.44	110.94	111.94	0								0	0	0	0.42693	1	48201	48201		1.0715	0	1		+		23233	14857	11542	11595	26645	26645					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2266723513603	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.71	1	116.71	116.21	117.21	0								0	0	0	0.42693	1	50337	50337		1.0715	0	1		+		23234	14857	11542	11595	26646	26646					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2278625369072	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.17	1	119.21	118.71	119.71	0.041039								0	0	0	0.42693	1	51175	51175		0.26902	0	1		+		23235	14857	11542	11595	26647	26647					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2276489138603	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.33	1	119.37	118.87	119.87	0.041039								0	0	0	0.42693	1	51242	51242		1.0715	0	1		+		23236	14857	11542	11595	26648	26648					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2280456423759	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.2	1	119.43	118.93	119.93	0.23128								0	0	0	0.42693	1	51503	51503		0.26902	0	1		+		23237	14857	11542	11595	26649	26649					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2273742556572	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.65	1	119.89	119.39	120.39	0.243								0	0	0	0.42693	1	51684	51684		1.0715	0	1		+		23238	14857	11542	11595	26650	26650					0.14500971276152086
NKVAFLIII	9	Unmodified	_NKVAFLIII_					0	0	0			REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	REV__tr|A0A553SIM4|A0A553SIM4_NIACIPTSmannosetransportersubunitIIABOS=NialliacirculansOX=1397GN=CEQ21_15105PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2262145876884	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.7	1	47.67	47.17	48.17	1.9703								0	0	0	0.42693	1	19144	19144		1.0715	0	1		+		23239	14857	11542	11595	26651	26651					0.14500971276152086
NKVAIVDD	8	Unmodified	_NKVAIVDD_					0	0	0		nc|ENSG00000196091|Q00872-5|MYBPC1;nc|ENSG00000196091|Q00872-3|MYBPC1;nc|ENSG00000196091|Q00872-9|MYBPC1;nc|ENSG00000196091|Q00872-8|MYBPC1;nc|ENSG00000196091|Q00872-7|MYBPC1;nc|ENSG00000196091|Q00872|MYBPC1;nc|ENSG00000196091|Q00872-10|MYBPC1;nc|ENSG00000196091|Q00872-2|MYBPC1;ENSG00000196091|ENST00000361466|MYBPC1;nc|ENSG00000196091|Q00872-6|MYBPC1	nc|ENSG00000196091|Q00872-5|MYBPC1	nc|ENSG00000196091|Q00872-5|MYBPC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2375671267509	2	437.23745	872.460347	1.1237	0.00049132	-2.8907	-0.0012639	-1.767	-0.0007726	437.23600163641424	69.057	0.30921	69.057	68.893	69.202	0					14	9	2	0	0	0	0.89051	1	28795	28795		2.3027	0	1	458990			23240	4911	11543	11596	26652	26652					0.019015056264606756
NKVAKRGP	8	Unmodified	_NKVAKRGP_					0	0	0		ENSG00000048405|ENST00000265827|ZNF800	ENSG00000048405|ENST00000265827|ZNF800	ENSG00000048405|ENST00000265827|ZNF800	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2695495486259	2	435.269419	868.524284	1.8415	0.00080156	1.3801	0.0006007	3.2216	0.0014023	435.26979786539005	84.259	0.46458	84.259	83.966	84.43	0					29	14	3	0	0	0	0.89051	1	35067	35067		2.3027	0	1	2772800			23241	685	11544	11597	26653	26653					0.08476330574092117
NKVEDAFY	8	Unmodified	_NKVEDAFY_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1574279665947	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.084	1	43.084	42.584	43.584	0								0	0	0	1.0178	1	18036	18036		1.6526	0.58116	1				23242	2430	11545	11598	26654	26654					-0.03758798236151506
NKVEDAFY	8	Unmodified	_NKVEDAFY_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1564819216728	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.646	1	33.924	33.424	34.424	1.2782								0	0	0	1.0178	1	13692	13692		1.6526	1.1943	1				23243	2430	11545	11598	26655	26655					-0.03758798236151506
NKVEDAFY	8	Unmodified	_NKVEDAFY_					0	0	0		ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	ENSG00000130349|ENST00000311381|MTRES1	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1576415896416	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.159	1	47.534	47.034	48.034	1.3751								0	0	0	1.0178	1	19334	19334		1.6526	1.1943	1				23244	2430	11545	11598	26656	26656					-0.03758798236151506
NKVEMPAL	8	Unmodified	_NKVEMPAL_					0	0	0		tr|A0A553SI35|A0A553SI35_NIACIYwgAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14150PE=4SV=1	tr|A0A553SI35|A0A553SI35_NIACIYwgAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14150PE=4SV=1	tr|A0A553SI35|A0A553SI35_NIACIYwgAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14150PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1649352908134	3	301.165239	900.473888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.667	1	73.667	73.167	74.167	0								0	0	0	1.0178	1	30675	30675		0.40072	0	1				23245	16181	11546	11599	26657	26657					0.019670401340590615
NKVFEEKK	8	Unmodified	_NKVFEEKK_					0	0	0		ENST00000523568.1_7:102228019-102246337:-|nuORF;nc|ENSG00000105808|O43374-2|RASA4;ENSG00000170667|ENST00000465829|RASA4B;ENSG00000105808|ENST00000262940|RASA4	ENST00000523568.1_7:102228019-102246337:-|nuORF	ENST00000523568.1_7:102228019-102246337:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1959411501884	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.092	1	94.237	93.737	94.737	0.14493								0	0	0	1.0178	1	39382	39382		1.4819	0	1				23246	1543	11547	11600	26658	26658					0.05093742960286818
NKVFRCPM	8	Unmodified	_NKVFRCPM_					0	0	0		ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant;nc|ENSG00000121270|Q96J66-2|ABCC11;ENSG00000121270|ENST00000356608|ABCC11	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	332.1706725955009	3	332.170219	993.488827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.502	1	47.461	46.961	47.961	1.9596								0	0	0	1.0178	1	19064	19064		0.40072	0	1				23247	8	11548	11601	26659	26659					-0.008177912695828127
NKVFWVPV	8	Unmodified	_NKVFWVPV_					0	0	0			REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	REV__nc|ENSG00000121775|Q9GZU3-4|TMEM39B	MSMS	GG20161007_CRH_Patient100_A02_01	1	330.1917297244072	3	330.192006	987.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.109	1	60.109	59.609	60.609	0								0	0	0	1.0178	1	25065	25065		1.6526	0	1		+		23248	9596	11549	11602	26660	26660					0.05991269519427078
NKVGVAPL	8	Unmodified	_NKVGVAPL_					0	0	0		ENST00000540708.5_1_12:123466944-123467130:+|nuORF;ENST00000442210.2_1_12:123465790-123467130:+|nuORF;nc|ENSG00000182196|Q66PJ3-10|ARL6IP4;nc|ENSG00000182196|Q66PJ3-4|ARL6IP4	ENST00000540708.5_1_12:123466944-123467130:+|nuORF	ENST00000540708.5_1_12:123466944-123467130:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513000369072	2	399.247621	796.480688	2.5812	0.0010305	-0.29881	-0.0001193	2.2824	0.00091122	399.247729179897	61.281	1.2447	62.699	62.375	63.619	1.4177					62	39	3	0	0	0	0.89051	1	25849	25849		2.3027	0	1	9607700			23249	6563	11550	11603	26661	26661					0.07430721076946156
NKVISYMLYM	10	Unmodified	_NKVISYMLYM_					0	0	0			REV__PCF11|p.D78Y|1|0.24|ENSG00000165494|chr11:83161366-83161366|G/T|missense_variant	REV__PCF11|p.D78Y|1|0.24|ENSG00000165494|chr11:83161366-83161366|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2165710330009	3	421.215494	1260.62465	0.76519	0.00032231	1.0973	0.0004622	1.8625	0.00078451	421.2158129199508	29.037	0.30206	30.835	30.657	30.959	1.7987					16	9	2	0	0	0	0.89803	1	12199	12199		0.69767	0.07084	1	841470	+		23250	14595	11551	11604	26662	26662					0.004764387305385753
NKVKAQGR	8	Unmodified	_NKVKAQGR_					0	0	0			REV__ENST00000462348.1_1_6:42848614-42854030:+|nuORF	REV__ENST00000462348.1_1_6:42848614-42854030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7739440798759	2	450.772326	899.530098	2.3479	0.0010584	0.71089	0.00032045	3.0588	0.0013788	450.77246756579075	83.341	0.44263	84.529	84.262	84.704	1.1879					31	13	3	0	0	0	0.89152	1	35002	35002		2.5775	0	1	2773700	+		23251	10295	11552	11605	26663	26663					0.07631429085756736
NKVKKEDGHFV	11	Unmodified	_NKVKKEDGHFV_					0	0	0		tr|A0A553SNM9|A0A553SNM9_NIACID-alanyl-D-alaninecarboxypeptidasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24660PE=4SV=1	tr|A0A553SNM9|A0A553SNM9_NIACID-alanyl-D-alaninecarboxypeptidasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24660PE=4SV=1	tr|A0A553SNM9|A0A553SNM9_NIACID-alanyl-D-alaninecarboxypeptidasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24660PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.2383911013603	3	434.238455	1299.69353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.777	1	96.777	96.277	97.277	0								0	0	0	0.63775	1	40457	40457		0.45452	0.087843	1				23252	16428	11553	11606	26664	26664					0.05567562346118393
NKVKMKKK	8	Unmodified	_NKVKMKKK_					0	0	0			REV__ENSG00000166801|ENST00000675163|FAM111A	REV__ENSG00000166801|ENST00000675163|FAM111A	MSMS	GG20161007_CRH_Patient100_A02_02	2	335.2199584841728	3	335.219678	1002.63721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.003	1	95.126	94.626	95.626	0.12331								0	0	0	1.0178	1	39756	39756		0.40072	0	1		+		23253	10837	11554	11607	26665	26665					0.13599262975776583
NKVKPSTH	8	Unmodified	_NKVKPSTH_					0	0	0			REV__ENSG00000125571|ENST00000263326|IL37	REV__ENSG00000125571|ENST00000263326|IL37	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.1753723025322	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.376	1	34.673	34.173	35.173	0.29701								0	0	0	1.0178	1	14436	14436		1.4819	1.0812	1		+		23254	9670	11555	11608	26666	26666					0.044843204745689036
NKVKPSTH	8	Unmodified	_NKVKPSTH_					0	0	0			REV__ENSG00000125571|ENST00000263326|IL37	REV__ENSG00000125571|ENST00000263326|IL37	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.1757995486259	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.957	1	69.28	68.78	69.78	0.32224								0	0	0	1.0178	1	28865	28865		1.4819	1.0812	1		+		23255	9670	11555	11608	26667	26667					0.044843204745689036
NKVKPSTH	8	Unmodified	_NKVKPSTH_					0	0	0			REV__ENSG00000125571|ENST00000263326|IL37	REV__ENSG00000125571|ENST00000263326|IL37	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1759521365166	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.583	1	76.89	76.39	77.39	1.3063								0	0	0	1.0178	1	31724	31724		1.4819	0	1		+		23256	9670	11555	11608	26668	26668					0.044843204745689036
NKVKPSTH	8	Unmodified	_NKVKPSTH_					0	0	0			REV__ENSG00000125571|ENST00000263326|IL37	REV__ENSG00000125571|ENST00000263326|IL37	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1759826540947	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.559	1	77.853	77.353	78.353	1.2938								0	0	0	1.0178	1	32140	32140		1.4819	1.0236	1		+		23257	9670	11555	11608	26669	26669					0.044843204745689036
NKVKPSTH	8	Unmodified	_NKVKPSTH_					0	0	0			REV__ENSG00000125571|ENST00000263326|IL37	REV__ENSG00000125571|ENST00000263326|IL37	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1760131716728	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.716	1	78.01	77.51	78.51	1.2938								0	0	0	1.0178	1	32205	32205		1.4819	1.0236	1		+		23258	9670	11555	11608	26670	26670					0.044843204745689036
NKVKYNKKLV	10	Unmodified	_NKVKYNKKLV_					0	0	0		tr|A0A7D6ZXA5|A0A7D6ZXA5_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12670PE=4SV=1	tr|A0A7D6ZXA5|A0A7D6ZXA5_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12670PE=4SV=1	tr|A0A7D6ZXA5|A0A7D6ZXA5_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12670PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3889648318291	2	617.387522	1232.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.28	1	107.44	106.94	107.94	0.15781								0	0	0	0.66166	1	46106	46106		1.6526	0	1				23259	17188	11556	11609	26671	26671					0.15342217627880927
NKVLEVKKPPR	11	Unmodified	_NKVLEVKKPPR_					0	0	0		nc|ENSG00000183833|Q7Z4T9-6|CFAP91;nc|ENSG00000183833|Q7Z4T9-3|CFAP91;nc|ENSG00000183833|Q7Z4T9-8|CFAP91;ENST00000482927.5_1_3:119422024-119469941:+|nuORF;ENSG00000183833|ENST00000273390|CFAP91	nc|ENSG00000183833|Q7Z4T9-6|CFAP91	nc|ENSG00000183833|Q7Z4T9-6|CFAP91	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.0081359744072	4	327.709403	1306.8085	-1.8049	-0.00059147	-1.0591	-0.00034707	-2.864	-0.00093854	327.7089279011825	53.856	0.79484	53.856	53.519	54.314	0					42	24	2	0	0	0	0.14606	1	22333	22333		0.45452	0.1855	1	566080			23260	4671	11557	11610	26672	26672					0.16737291547906352
NKVMAVFR	8	Unmodified	_NKVMAVFR_					0	0	0		tr|A0A7D6VSA7|A0A7D6VSA7_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08555PE=4SV=1	tr|A0A7D6VSA7|A0A7D6VSA7_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08555PE=4SV=1	tr|A0A7D6VSA7|A0A7D6VSA7_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08555PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	322.1860229372978	3	322.184745	963.532406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.6	1	72.942	72.442	73.442	1.3415								0	0	0	1.0178	1	30051	30051		0.40072	0	1				23261	16862	11558	11611	26673	26673					0.049181414992062855
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2072021365166	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.756	1	50.756	50.256	51.256	0								0	0	0	1.0178	1	21171	21171		0.40072	0	1		+		23262	14345	11559	11612	26674	26674					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2063171267509	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.425	1	83.425	82.925	83.925	0								0	0	0	1.0178	1	34762	34762		1.3295	0	1		+		23263	14345	11559	11612	26675	26675					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2070495486259	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.594	1	93.594	93.094	94.094	0								0	0	0	1.0178	1	39116	39116		0.40072	0	1		+		23264	14345	11559	11612	26676	26676					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2073242068291	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.483	1	59.809	59.309	60.309	0.32553								0	0	0	1.0178	1	24926	24926		0.40072	0	1		+		23265	14345	11559	11612	26677	26677					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2076599001884	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.616	1	59.942	59.442	60.442	0.32553								0	0	0	1.0178	1	24981	24981		0.40072	0	1		+		23266	14345	11559	11612	26678	26678					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2081786990166	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.739	1	60.064	59.564	60.564	0.32553								0	0	0	1.0178	1	25032	25032		0.40072	0	1		+		23267	14345	11559	11612	26679	26679					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2063171267509	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.94	1	60.268	59.768	60.768	0.32809								0	0	0	1.0178	1	25118	25118		0.40072	0	1		+		23268	14345	11559	11612	26680	26680					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2068054080009	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.481	1	72.806	72.306	73.306	0.32494								0	0	0	1.0178	1	30325	30325		0.40072	0	1		+		23269	14345	11559	11612	26681	26681					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2071716189384	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.104	1	53.5	53	54	1.3966								0	0	0	1.0178	1	21814	21814		0.40072	0	1		+		23270	14345	11559	11612	26682	26682					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2066223025322	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.344	1	57.754	57.254	58.254	1.4099								0	0	0	1.0178	1	23613	23613		0.40072	0	1		+		23271	14345	11559	11612	26683	26683					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2082092165947	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.966	1	62.386	61.886	62.886	1.4196								0	0	0	1.0178	1	25567	25567		0.40072	0	1		+		23272	14345	11559	11612	26684	26684					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2074767947197	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.745	1	74.074	73.574	74.574	1.3297								0	0	0	1.0178	1	30532	30532		0.40072	0	1		+		23273	14345	11559	11612	26685	26685					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2067443728447	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.178	1	85.366	84.866	85.866	1.1879								0	0	0	1.0178	1	35324	35324		0.40072	0	1		+		23274	14345	11559	11612	26686	26686					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2074462771416	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.471	1	85.63	85.13	86.13	1.159								0	0	0	1.0178	1	35445	35445		1.4819	0	1		+		23275	14345	11559	11612	26687	26687					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2082092165947	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.293	1	89.349	88.849	89.849	1.0562								0	0	0	1.0178	1	37228	37228		0.40072	0	1		+		23276	14345	11559	11612	26688	26688					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2064697146416	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.645	1	60.615	60.115	61.115	1.969								0	0	0	1.0178	1	24604	24604		0.40072	0	1		+		23277	14345	11559	11612	26689	26689					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2070800662041	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.029	1	85.667	85.167	86.167	1.6379								0	0	0	1.0178	1	35242	35242		1.4819	0	1		+		23278	14345	11559	11612	26690	26690					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2063781619072	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.18	1	85.818	85.318	86.318	1.6379								0	0	0	1.0178	1	35305	35305		1.4819	0	1		+		23279	14345	11559	11612	26691	26691					0.11662039576856387
NKVQIKTK	8	Unmodified	_NKVQIKTK_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|73|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2075073122978	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.409	1	86.006	85.506	86.506	1.5962								0	0	0	1.0178	1	35403	35403		0.40072	0	1		+		23280	14345	11559	11612	26692	26692					0.11662039576856387
NKVRFVLIVG	10	Unmodified	_NKVRFVLIVG_					0	0	0			REV__ENST00000355485.6_1_1:116238301-116238403:+|nuORF	REV__ENST00000355485.6_1_1:116238301-116238403:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	382.2442504763603	3	382.244881	1143.71281	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.085	1	68.408	67.908	68.908	0.32269								0	0	0	0.66222	1	28501	28501		0.69767	0.07084	1		+		23281	12545	11560	11613	26693	26693					0.14670563427694105
NKVRSTLK	8	Unmodified	_NKVRSTLK_					0	0	0		STX1A|p.K92T|1|0.34|ENSG00000106089|chr7:73705158-73705158|T/G|missense_variant	STX1A|p.K92T|1|0.34|ENSG00000106089|chr7:73705158-73705158|T/G|missense_variant	STX1A|p.K92T|1|0.34|ENSG00000106089|chr7:73705158-73705158|T/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.0609313845634	3	315.866181	944.576714	0.50488	0.00015947	1.2615	0.00039848	1.7664	0.00055795	315.86673644224163	46.459	1.4736	47.834	46.897	48.37	1.3751					77	46	2	0	0	0	2.3239	1	19274	19274		0.40072	0	1	4134700			23282	16008	11561	11614	26694	26694					0.10220868917053849
NKVVLLVVF	9	Unmodified	_NKVVLLVVF_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|186|2|anti-sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|186|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2280151247978	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.581	1	44.908	44.408	45.408	0.32674								0	0	0	0.42693	1	18720	18720		1.0715	0	1		+		23283	14210	11562	11615	26695	26695					0.14500971276129349
NKVVLLVVF	9	Unmodified	_NKVVLLVVF_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|186|2|anti-sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|186|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2267944216728	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.239	1	46.183	45.683	46.683	1.9438								0	0	0	0.42693	1	18546	18546		1.0715	0	1		+		23284	14210	11562	11615	26696	26696					0.14500971276129349
NKVVVLGT	8	Unmodified	_NKVVVLGT_					0	0	0			REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2621337771416	2	415.260728	828.506903	1.5279	0.00063448	2.8739	0.0011934	4.4018	0.0018279	415.2618080170901	86.19	0.42467	86.19	85.914	86.339	0					37	13	3	0	0	0	0.89178	1	35863	35863		0.69038	0	1	3164700	+		23285	9076	11563	11616	26697	26697					0.08578990248440732
NKVVVLGT	8	Unmodified	_NKVVVLGT_					0	0	0			REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2623474001884	2	415.260728	828.506903	1.3971	0.00058016	3.0219	0.0012549	4.419	0.001835	415.261839881961	84.181	0.44069	85.369	85.115	85.556	1.1879					23	14	2	0	0	0	0.89178	1	35340	35340		0.69038	0	1	2683000	+		23286	9076	11563	11616	26698	26698					0.08578990248440732
NKVVVLGT	8	Unmodified	_NKVVVLGT_					0	0	0			REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2630798220634	2	415.260728	828.506903	1.5671	0.00065076	2.9317	0.0012174	4.4988	0.0018682	415.26160033016413	83.568	0.36734	85.206	84.98	85.347	1.6379					20	11	2	0	0	0	0.89178	1	35062	35062		0.69038	0	1	2249800	+		23287	9076	11563	11616	26699	26699					0.08578990248440732
NKVVVLGTRKV	11	Unmodified	_NKVVVLGTRKV_					0	0	0			REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	REV__nc|ENSG00000102543|Q9BWV3-3|CDADC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.8842956423759	4	303.950124	1211.77139	-1.8441	-0.00056053	1.0045	0.0003053	-0.83969	-0.00025522	303.9507674155203	61.165	0.21965	61.165	61.078	61.298	0					9	6	2	0	0	0	0.14606	1	25487	25487		0.45452	0.21867	1	434520	+		23288	9076	11564	11617	26700	26700					0.17397620002179792
NKVWLHLP	8	Unmodified	_NKVWLHLP_					0	0	0			REV__nc|ENSG00000117400|P40238-2|MPL	REV__nc|ENSG00000117400|P40238-2|MPL	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2017700076103	3	336.199272	1005.57599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.14	1	87.687	87.187	88.187	1.547								0	0	0	1.0178	1	36285	36285		0.40072	0	1		+		23289	9499	11565	11618	26701	26701					0.07342074267990029
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884460330009	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.068	1	37.373	36.873	37.873	0.30497								0	0	0	0.42693	1	15589	15589		0.23584	0.095952	1				23290	16178	11566	11619	26702	26702					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891479372978	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.946	1	41.263	40.763	41.763	0.31683								0	0	0	0.42693	1	17208	17208		0.23584	0.076522	1				23291	16178	11566	11619	26703	26703					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893920779228	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.488	1	42.809	42.309	43.309	0.32058								0	0	0	0.42693	1	17847	17847		0.23584	0.076522	1				23292	16178	11566	11619	26704	26704					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8894836306572	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.639	1	76.956	76.456	77.456	0.31727								0	0	0	0.42693	1	32053	32053		0.23584	0.076522	1				23293	16178	11566	11619	26705	26705					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882324099541	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.871	1	79.18	78.68	79.68	0.30933								0	0	0	0.42693	1	32977	32977		0.23584	0.076522	1				23294	16178	11566	11619	26706	26706					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887512087822	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.282	1	82.562	82.062	83.062	0.2802								0	0	0	0.42693	1	34406	34406		0.23584	0.076522	1				23295	16178	11566	11619	26707	26707					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.126	1	18.024	17.524	18.524	0.89794								0	0	0	0.42693	1	7128	7128		0.26902	0.033176	1				23296	16178	11566	11619	26708	26708					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8897888064384	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.039	1	92.021	91.521	92.521	0.98157								0	0	0	0.42693	1	38346	38346		0.23584	0.076522	1				23297	16178	11566	11619	26709	26709					0.0047005762478420365
NKWFYRFMV	9	Unmodified	_NKWFYRFMV_					0	0	0		tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	tr|A0A553SI17|A0A553SI17_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_14020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.221	1	84.859	84.359	85.359	1.6379								0	0	0	0.42693	1	34908	34908		0.23584	0.076522	1				23298	16178	11566	11619	26710	26710					0.0047005762478420365
NKWLLLQL	8	Unmodified	_NKWLLLQL_					0	0	0			REV__ENST00000464876.5_1_9:139918284-139922592:-|nuORF	REV__ENST00000464876.5_1_9:139918284-139922592:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	343.3057433962822	3	343.21481	1026.6226	-1.9366	-0.00066465	-1.733	-0.00059478	-3.6695	-0.0012594	343.21335327685955	109.88	0.087624	109.88	109.82	109.9	0					4	2	2	0	0	0	2.3239	1	47561	47561		0.40072	0	1	174700	+		23299	9229	11567	11620	26711	26711					0.11035514099285137
NKYEERDD	8	Unmodified	_NKYEERDD_					0	0	0			REV__tr|A0A7D6VQA6|A0A7D6VQA6_9CLOTXdhCfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02150PE=4SV=1	REV__tr|A0A7D6VQA6|A0A7D6VQA6_9CLOTXdhCfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02150PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	356.2802917361259	3	356.824599	1067.45197	1.6309	0.00058194	-1.1169	-0.00039854	0.51397	0.0001834	356.8245171153922	65.432	0.38096	65.759	65.548	65.929	0.32689					21	11	2	0	0	0	2.3239	1	27325	27325		0.40072	0	1	1573400	+		23300	15381	11568	11621	26712	26712					-0.07906093080805476
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8832885622978	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.753	1	31.753	31.253	32.253	0								0	0	0	0.42693	1	13304	13304		0.96228	0.26461	1				23301	1763	11569	11622	26713	26713					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8836242556572	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.438	1	61.438	60.938	61.938	0								0	0	0	0.42693	1	25617	25617		1.0715	0.29493	1				23302	1763	11569	11622	26714	26714					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827697634697	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.803	1	26.055	25.555	26.555	0.25197								0	0	0	0.42693	1	10775	10775		0.23584	0	1				23303	1763	11569	11622	26715	26715					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8832580447197	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.535	1	26.797	26.297	27.297	0.26173								0	0	0	0.42693	1	11093	11093		1.0715	0.56551	1				23304	1763	11569	11622	26716	26716					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8834716677666	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.238	1	50.566	50.066	51.066	0.32824								0	0	0	0.42693	1	21048	21048		0.23584	0	1				23305	1763	11569	11622	26717	26717					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8832885622978	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.355	1	28.634	28.134	29.134	1.2789								0	0	0	0.42693	1	11463	11463		0.23584	0	1				23306	1763	11569	11622	26718	26718					-0.008209586512748501
NKYFWQNFR	9	Unmodified	_NKYFWQNFR_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828918337822	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.322	1	34.146	33.646	34.646	1.8246								0	0	0	0.42693	1	13548	13548		1.0715	0	1				23307	1763	11569	11622	26719	26719					-0.008209586512748501
NKYIEFTS	8	Unmodified	_NKYIEFTS_					0	0	0			REV__tr|A0A7D6W0K3|A0A7D6W0K3_9CLOTATP-dependenthelicase/deoxyribonucleasesubunitBOS=ClostridiumintestinaleOX=36845GN=addBPE=3SV=1	REV__tr|A0A7D6W0K3|A0A7D6W0K3_9CLOTATP-dependenthelicase/deoxyribonucleasesubunitBOS=ClostridiumintestinaleOX=36845GN=addBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.5044738650322	3	334.502797	1000.48656	1.1946	0.0003996	3.4212	0.0011444	4.6158	0.001544	334.50408501394105	71.153	0.35622	72.494	72.333	72.689	1.3415					22	11	3	0	0	0	0.88846	1	29908	29908		3.5965	0.31518	1	3149900	+		23308	15581	11570	11623	26720	26720					-0.013662252020480992
NKYIIWALEGK	11	Unmodified	_NKYIIWALEGK_					0	0	0			REV__ENST00000490218.6_1_17:30212004-30222015:-|nuORF	REV__ENST00000490218.6_1_17:30212004-30222015:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1212341189384	3	445.587084	1333.73942	2.3843	0.0010624	-0.1819	-8.1051E-05	2.2024	0.00098135	445.9201040907518	43.994	0.2443	45.348	45.163	45.408	1.3536					10	7	2	0	0	0	0.14606	1	18469	18469		0.08335	0	1	795570	+		23309	9260	11571	11624	26721	26721					0.08590207528345672
NKYIKDRRI	9	Unmodified	_NKYIKDRRI_					0	0	0		tr|A0A7D6ZEY9|A0A7D6ZEY9_9CLOTHEATrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15690PE=4SV=1	tr|A0A7D6ZEY9|A0A7D6ZEY9_9CLOTHEATrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15690PE=4SV=1	tr|A0A7D6ZEY9|A0A7D6ZEY9_9CLOTHEATrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15690PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1812927126884	3	402.57529	1204.70404	5.2934	0.002131	-0.82398	-0.00033171	4.4694	0.0017993	402.57493546631565	89.022	0.15996	90.078	89.951	90.111	1.0562					7	4	2	0	0	0	0.11955	1	37479	37479		0	0	1	132600			23310	17058	11572	11625	26722	26722					0.10987589791216124
NKYKSKKR	8	Unmodified	_NKYKSKKR_					0	0	0			REV__ENST00000479790.2_1_13:22067163-22067286:-|nuORF	REV__ENST00000479790.2_1_13:22067163-22067286:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.2164489626884	3	351.217214	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.075	1	92.075	91.575	92.575	0								0	0	0	1.0178	1	38476	38476		0.40072	0	1		+		23311	13339	11573	11626	26723	26723					0.10652246699692114
NKYRKRLA	8	Unmodified	_NKYRKRLA_					0	0	0			REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	REV__tr|A0A7D6VR24|A0A7D6VR24_9CLOTDUF4173domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00800PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	350.2160827517509	3	350.217325	1047.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.439	1	62.439	61.939	62.939	0								0	0	0	1.0178	1	26032	26032		0.40072	0	1		+		23312	15401	11574	11627	26724	26724					0.1082366641956014
NKYVPETI	8	Unmodified	_NKYVPETI_					0	0	0		tr|A0A7D6W307|A0A7D6W307_9CLOTDUF4830domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08080PE=4SV=1	tr|A0A7D6W307|A0A7D6W307_9CLOTDUF4830domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08080PE=4SV=1	tr|A0A7D6W307|A0A7D6W307_9CLOTDUF4830domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.2623168826103	2	482.260925	962.507297	1.9939	0.00096158	-0.38385	-0.00018512	1.61	0.00077646	482.26088407884026	76.577	0.25329	76.577	76.497	76.75	0					11	7	2	0	0	0	0.88587	1	31888	31888		5.2307	0	1	436940			23313	17040	11575	11628	26725	26725					0.02454365177618456
NKYWVFSKCQ	10	Unmodified	_NKYWVFSKCQ_					0	0	0		nc|ENSG00000163918|P35249-2|RFC4;ENST00000494047.5_1_3:186509405-186522502:-|nuORF	nc|ENSG00000163918|P35249-2|RFC4	nc|ENSG00000163918|P35249-2|RFC4	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8832580447197	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.98	1	117.2	116.7	117.7	0.21096								0	0	0	0.66255	1	50608	50608		0.13989	0	1				23314	6933	11576	11629	26726	26726					-0.016068539630396117
NKYWVFSKCQ	10	Unmodified	_NKYWVFSKCQ_					0	0	0		nc|ENSG00000163918|P35249-2|RFC4;ENST00000494047.5_1_3:186509405-186522502:-|nuORF	nc|ENSG00000163918|P35249-2|RFC4	nc|ENSG00000163918|P35249-2|RFC4	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8831970095634	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.832	1	77.599	77.099	78.099	1.7672								0	0	0	0.66255	1	31816	31816		0.13989	0	1				23315	6933	11576	11629	26727	26727					-0.016068539630396117
NKYYRIRLL	9	Unmodified	_NKYYRIRLL_					0	0	0		tr|A0A7D6ZTB4|A0A7D6ZTB4_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_19370PE=3SV=1	tr|A0A7D6ZTB4|A0A7D6ZTB4_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_19370PE=3SV=1	tr|A0A7D6ZTB4|A0A7D6ZTB4_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_19370PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1344482302666	4	310.439658	1237.72953	-0.06596	-2.0476E-05	-1.8252	-0.00056662	-1.8912	-0.0005871	310.4394162410052	24.935	0.45351	26.619	26.45	26.903	1.6845					20	14	2	0	0	0	0.11946	1	10475	10475		0	0	1	310550			23316	17141	11577	11630	26728	26728					0.1201706431365892
NLAEKLIGV	9	Unmodified	_NLAEKLIGV_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;ENST00000495949.1_1_20:37126104-37128277:+|nuORF	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.7935363650322	2	478.792392	955.570232	2.313	0.0011074	0.33529	0.00016053	2.6483	0.001268	478.79243926302763	50.611	0.63348	50.611	50.373	51.007	0					57	19	4	0	0	0	0.0037498	4	21100	21064;21100;21139;21181		125.53	50.6	1	23335000			23317	4148	11578	11631	26729;26730;26731;26732	26730					0.09066930965661868
NLAEKLIGV	9	Unmodified	_NLAEKLIGV_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;ENST00000495949.1_1_20:37126104-37128277:+|nuORF	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7936279177666	2	478.792392	955.570232	2.5289	0.0012108	-0.13847	-6.6298E-05	2.3904	0.0011445	478.7923515961977	50.045	0.75087	50.375	50.169	50.92	0.33019					53	23	4	0	0	0	0.0058174	3	20968	20923;20968;21007		118.89	43.966	1	25816000			23318	4148	11578	11631	26733;26734;26735	26734					0.09066930965661868
NLAEKLIGV	9	Unmodified	_NLAEKLIGV_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;ENST00000495949.1_1_20:37126104-37128277:+|nuORF	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7934142947197	2	478.792392	955.570232	1.4062	0.00067326	0.48199	0.00023077	1.8882	0.00090404	478.7926880616976	48.676	1.0811	50.064	49.804	50.885	1.388					85	34	5	0	0	0	0.0006934	5	20377	20294;20338;20377;20416;20455		134.3	59.367	1	92850000			23319	4148	11578	11631	26736;26737;26738;26739;26740	26738					0.09066930965661868
NLAEKLIGV	9	Unmodified	_NLAEKLIGV_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;ENST00000495949.1_1_20:37126104-37128277:+|nuORF	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7934753298759	2	478.792392	955.570232	2.2262	0.0010659	-0.63615	-0.00030459	1.5901	0.0007613	478.7921411153503	48.182	1.324	50.16	49.868	51.192	1.9772					89	42	5	0	0	0	0.0037498	4	20157	20107;20157;20208;20332		125.53	50.6	1	78525000			23320	4148	11578	11631	26741;26742;26743;26744	26742					0.09066930965661868
NLAENISRV	9	Unmodified	_NLAENISRV_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL;PYGL|p.R270Q|1|0.05|ENSG00000100504|chr14:50920587-50920587|C/T|missense_variant;PYGL|p.R270G|1|0.47|ENSG00000100504|chr14:50920588-50920588|G/C|missense_variant;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;ENSG00000068976|ENST00000164139|PYGM	nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100994|ENST00000216962|PYGB	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2805663943291	2	508.28018	1014.54581	1.2923	0.00065684	-0.22681	-0.00011528	1.0655	0.00054156	508.27996401018015	29.007	0.33319	30.29	30.1	30.433	1.2825					21	10	3	0	0	0	0.02878	2	12188	12140;12188		89.401	28.043	1	3244100			23321	1284;1316	11579	11632	26745;26746	26746					0.03911670812135526
NLAENISRV	9	Unmodified	_NLAENISRV_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL;PYGL|p.R270Q|1|0.05|ENSG00000100504|chr14:50920587-50920587|C/T|missense_variant;PYGL|p.R270G|1|0.47|ENSG00000100504|chr14:50920588-50920588|G/C|missense_variant;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;ENSG00000068976|ENST00000164139|PYGM	nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100994|ENST00000216962|PYGB	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2805053591728	2	508.28018	1014.54581	0.89816	0.00045652	0.34562	0.00017567	1.2438	0.00063219	508.28033626293643	28.392	0.30418	30.167	30.061	30.365	1.7754					23	9	3	0	0	0	0.056421	2	11885	11885;11951		65.474	17.725	1	3571900			23322	1284;1316	11579	11632	26747;26748	26747					0.03911670812135526
NLAENISRV	9	Unmodified	_NLAENISRV_					0	0	0		nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100504|ENST00000216392|PYGL;PYGL|p.R270Q|1|0.05|ENSG00000100504|chr14:50920587-50920587|C/T|missense_variant;PYGL|p.R270G|1|0.47|ENSG00000100504|chr14:50920588-50920588|G/C|missense_variant;ENSG00000100994|ENST00000216962|PYGB;nc|ENSG00000068976|P11217-2|PYGM;ENSG00000068976|ENST00000164139|PYGM	nc|ENSG00000100504|P06737-2|PYGL;ENSG00000100994|ENST00000216962|PYGB	nc|ENSG00000100504|P06737-2|PYGL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	508.28018	1014.54581	1.3819	0.00070238	-0.66425	-0.00033762	0.71764	0.00036476	508.27935687130014	30.149	0.17749	30.435	30.353	30.53	0.2859	0.13735	-0.00069364	NaN	89.401	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1028400			23323	1284;1316	11579	11632							0.03911670812135526
NLAERLAEL	9	Unmodified	_NLAERLAEL_					0	0	0			REV__tr|A0A7D6ZTD2|A0A7D6ZTD2_9CLOTCyanophycinsynthetaseOS=ClostridiumintestinaleOX=36845GN=cphAPE=3SV=1	REV__tr|A0A7D6ZTD2|A0A7D6ZTD2_9CLOTCyanophycinsynthetaseOS=ClostridiumintestinaleOX=36845GN=cphAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.8223144412041	2	514.790381	1027.56621	1.991	0.001025	-2.1938	-0.0011294	-0.20279	-0.00010439	514.7890687225017	42.352	0.15659	44.273	44.133	44.29	1.9211					7	4	2	0	0	0	0.095873	1	17711	17711		20.415	2.2682	1	529240	+		23324	15714	11580	11633	26749	26749					0.05352841471949432
NLALYAYSQ	9	Unmodified	_NLALYAYSQ_					0	0	0			REV__ENSG00000004399|ENST00000324093|PLXND1	REV__ENSG00000004399|ENST00000324093|PLXND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7639648318291	2	521.763832	1041.51311	2.6259	0.0013701	-2.0062	-0.0010468	0.61969	0.00032333	521.7620761219152	73.419	0.43459	75.215	74.974	75.409	1.7962					27	13	3	0	0	0	0.10473	1	30811	30811		47.749	0	1	5348400	+		23325	8484	11581	11634	26750	26750					-0.00598536310712916
NLANVVLLL	9	Unmodified	_NLANVVLLL_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.8126098513603	2	484.810585	967.606617	4.2512	0.002061	-1.5714	-0.00076181	2.6798	0.0012992	484.80938965535046	92.58	0.45901	93.517	93.342	93.801	0.93623					21	13	3	0	0	0	0.076627	1	38970	38970		57.471	13.064	1	849570			23326	2935	11582	11635	26751	26751					0.12151807862392161
NLANVVLLL	9	Unmodified	_NLANVVLLL_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;nc|ENSG00000140829|Q92620-2|DHX38	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.8118774294853	2	484.810585	967.606617	3.1817	0.0015425	-1.667	-0.0008082	1.5147	0.00073433	484.809671531708	92.163	0.38884	93.489	93.277	93.666	1.3269					18	11	2	0	0	0	0.076627	1	38779	38779		57.471	13.064	1	402700			23327	2935	11582	11635	26752	26752					0.12151807862392161
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7729675173759	2	510.771657	1019.52876	2.0953	0.0010702	0.17848	9.1164E-05	2.2738	0.0011614	510.77176488482615	75.358	0.53741	75.358	75.059	75.597	0					42	16	3	0	0	0	0.0017491	4	31374	31294;31336;31374;31414		131.27	0	1	24769000			23328	8048	11583	11636	26753;26754;26755;26756	26755					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1020.539477527142	1	1020.53604	1019.52876	1.8802	0.0019188	0.25541	0.00026066	2.1356	0.0021794	1020.5358580890017	75.366	0.38002	75.366	75.154	75.534	0					24	11	3	0	0	0	0.0058174	3	31366	31320;31366;31421		118.89	0	1	2621200			23329	8048	11583	11636	26757;26758;26759	26758					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.7730285525322	2	510.771657	1019.52876	2.7329	0.0013959	-0.12039	-6.1491E-05	2.6125	0.0013344	510.7715504616267	74.925	0.50002	75.249	74.958	75.458	0.32464					42	15	3	0	0	0	0.0017491	4	31302	31259;31302;31341;31381		131.27	0	1	31419000			23330	8048	11583	11636	26760;26761;26762;26763	26761					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1020.538439929485	1	1020.53604	1019.52876	2.9323	0.0029925	-0.12205	-0.00012456	2.8103	0.002868	1020.5354005063491	74.954	0.40439	75.279	74.989	75.393	0.32463					28	12	3	0	0	0	0.0058174	2	31297	31297;31349		118.89	0	1	3012700			23331	8048	11583	11636	26764;26765	26764					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7737609744072	2	510.771657	1019.52876	3.8353	0.001959	-0.61419	-0.00031371	3.2212	0.0016453	510.7714277448302	73.852	0.7174	75.17	74.873	75.591	1.318					55	22	3	0	0	0	0.0017491	5	31005	30924;30966;31005;31044;31083		131.27	0	1	98823000			23332	8048	11583	11636	26766;26767;26768;26769;26770	26768					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1020.538561999798	1	1020.53604	1019.52876	2.8818	0.002941	-0.22939	-0.0002341	2.6524	0.0027069	1020.5355391442383	73.908	0.47087	75.226	74.935	75.405	1.318					35	14	3	0	0	0	2.7126E-05	3	31009	30959;31009;31063		165.72	0	1	9978100			23333	8048	11583	11636	26771;26772;26773	26772					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7730285525322	2	510.771657	1019.52876	2.9932	0.0015288	-0.10793	-5.5127E-05	2.8852	0.0014737	510.77167296241623	73.443	0.72064	75.239	74.846	75.567	1.7962					57	22	3	0	0	0	0.0017491	4	30719	30719;30769;30808;30847		131.27	0	1	68711000			23334	8048	11583	11636	26774;26775;26776;26777	26774					0.019777502063448082
NLASFLEQV	9	Unmodified	_NLASFLEQV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1020.538378894329	1	1020.53604	1019.52876	2.7107	0.0027664	-0.29517	-0.00030123	2.4156	0.0024652	1020.5355620388252	73.412	0.49768	75.208	74.911	75.409	1.7962					40	15	4	0	0	0	2.9716E-05	3	30741	30741;30784;30840		163.04	0	1	11848000			23335	8048	11583	11636	26778;26779;26780	26778					0.019777502063448082
NLASFLEQVAV	11	Unmodified	_NLASFLEQVAV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.8304931521416	2	595.824421	1189.63429	4.7302	0.0028184	1.954	0.0011643	6.6842	0.0039826	595.8253055236796	87.631	0.28577	89.126	88.983	89.269	1.4953					15	8	2	0	0	0	0.033192	1	36950	36950		76.825	0	1	957690			23336	8048	11584	11637	26781	26781					0.04705666331960856
NLASFLEQVAV	11	Unmodified	_NLASFLEQVAV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	595.824421	1189.63429	2.5057	0.001493	0.8409	0.00050103	3.3466	0.001994	596.3258030662653	88.925	0.22549	89.149	89.004	89.229	0.22359	0.024966	-0.00060358	NaN	76.825	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	373980			23337	8048	11584	11637							0.04705666331960856
NLASFLEQVAV	11	Unmodified	_NLASFLEQVAV_					0	0	0		PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	PCBD1|p.I96L|1|0.14|ENSG00000166228|chr10:70883979-70883979|T/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	595.824421	1189.63429	5.2918	0.003153	1.731	0.0010314	7.0228	0.0041844	595.8249830793567	88.04	0.31812	89.097	88.922	89.24	1.0562	-0.027224	0.0004571	NaN	76.825	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1031100			23338	8048	11584	11637							0.04705666331960856
NLDFNPPHV	9	Unmodified	_NLDFNPPHV_					0	0	0		ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7623168826103	2	526.761623	1051.50869	2.5649	0.0013511	-1.2147	-0.00063985	1.3502	0.00071121	526.7608696106256	44.524	0.44344	45.889	45.706	46.149	1.3653					32	13	4	0	0	0	0.24063	1	18667	18667		28.487	14.979	1	657770			23339	3621	11585	11638	26782	26782					-0.015000007336311683
NLDFNPPHV	9	Unmodified	_NLDFNPPHV_					0	0	0		ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	ENSG00000162433|ENST00000327299|AK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2657348513603	2	526.761623	1051.50869	2.3091	0.0012164	1.6659	0.00087755	3.9751	0.0020939	527.2650603450518	43.911	0.4766	45.855	45.67	46.146	1.9438					32	14	3	0	0	0	0.30098	1	18418	18418		25.399	12.357	1	860140			23340	3621	11585	11638	26783	26783					-0.015000007336311683
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.8768798708916	3	417.874959	1250.60305	1.9211	0.00080279	-1.0566	-0.00044155	0.86448	0.00036124	417.87486429268597	40.084	0.34344	40.396	40.227	40.57	0.31263					17	10	2	0	0	0	0.96769	1	16836	16836		2.6312	0	1	923450	+		23341	10109	11586	11639	26784	26784					-0.012229514928321805
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	626.3106567263603	2	626.3088	1250.60305	1.5709	0.00098389	-1.7777	-0.0011134	-0.20674	-0.00012949	626.3071954340497	40.108	0.34541	40.421	40.257	40.602	0.31263					25	10	3	0	0	0	0.77451	1	16849	16849		16.149	0.90062	1	964370	+		23342	10109	11586	11639	26785	26785					-0.012229514928321805
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3090698122978	2	626.3088	1250.60305	0.43741	0.00027395	-2.6259	-0.0016447	-2.1885	-0.0013707	626.3076015455291	38.139	0.31272	39.959	39.818	40.131	1.8202					20	9	3	0	0	0	0.77451	1	15984	15984		16.149	0.90062	1	1950400	+		23343	10109	11586	11639	26786	26786					-0.012229514928321805
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	417.874959	1250.60305	0.67498	0.00028206	-0.72097	-0.00030128	-0.045988	-1.9217E-05	417.8754221818233	40.628	0.30387	40.628	40.427	40.731	0	0.11584	0.00029985	NaN	2.6312	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	592130	+		23344	10109	11586	11639							-0.012229514928321805
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	626.3088	1250.60305	1.5709	0.00098389	-1.7777	-0.0011134	-0.20674	-0.00012949	626.3071954340497	40.108	0.34541	40.421	40.257	40.602	0.31263	-0.08333	0.00060257	NaN	16.149	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	964370	+		23345	10109	11586	11639							-0.012229514928321805
NLDTLFDEVSV	11	Unmodified	_NLDTLFDEVSV_					0	0	0			REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	REV__nc|ENSG00000139734|Q9NSV4-1|DIAPH3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	417.874959	1250.60305	1.9211	0.00080279	-1.0566	-0.00044155	0.86448	0.00036124	417.87486429268597	40.084	0.34344	40.396	40.227	40.57	0.31263	-0.11584	-0.00012096	NaN	2.6312	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	923450	+		23346	10109	11586	11639							-0.012229514928321805
NLEDACDDI	9	Unmodified	_NLEDACDDI_					0	0	0		ENSG00000101132|ENST00000371419|PFDN4;ENST00000487129.1_1_20:52825073-52835686:+|nuORF	ENSG00000101132|ENST00000371419|PFDN4	ENSG00000101132|ENST00000371419|PFDN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.4717895388603	3	336.471057	1006.39134	2.2384	0.00075315	1.2199	0.00041046	3.4583	0.0011636	336.47143046482716	72.97	0.40498	74.299	74.101	74.506	1.3298					30	12	3	0	0	0	0.81521	1	30611	30611		2.7352	0.23671	1	2769800			23347	1321	11587	11640	26787	26787					-0.11159946455416048
NLEKARDVI	9	Unmodified	_NLEKARDVI_					0	0	0			REV__tr|A0A7D6ZF61|A0A7D6ZF61_9CLOTS8familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13575PE=3SV=1	REV__tr|A0A7D6ZF61|A0A7D6ZF61_9CLOTS8familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13575PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3060180544853	2	529.303655	1056.59276	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.488	1	52.813	52.313	53.313	0.32553								0	0	0	0.33839	1	21989	21989		14.838	0	1		+		23348	15628	11588	11641	26788	26788					0.0667253036326656
NLEQVHRR	8	Unmodified	_NLEQVHRR_					0	0	0		nc|ENSG00000182771|Q9ULK0-2|GRID1;ENSG00000182771|ENST00000327946|GRID1	nc|ENSG00000182771|Q9ULK0-2|GRID1	nc|ENSG00000182771|Q9ULK0-2|GRID1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.7782470583916	2	526.291414	1050.56827	1.826	0.00096102	2.3284	0.0012254	4.1545	0.0021865	526.2918965573716	65.845	0.3345	67.753	67.586	67.921	1.9085					22	10	3	0	0	0	2.3239	1	27679	27679		7.2892	0	1	2132200			23349	4625	11589	11642	26789	26789					0.045013150004251656
NLFDRVVTL	9	Unmodified	_NLFDRVVTL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8098022341728	2	538.808574	1075.60259	1.6077	0.00086625	1.1471	0.00061806	2.7548	0.0014843	538.8091294785163	66.209	0.32394	66.209	66.058	66.382	0					21	9	3	0	0	0	0.11077	1	27575	27575		45.74	3.9002	1	1529300			23350	3745	11590	11643	26790	26790					0.06781718368665679
NLFDRVVTL	9	Unmodified	_NLFDRVVTL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8104736208916	2	538.808574	1075.60259	1.9679	0.0010603	0.83338	0.00044903	2.8013	0.0015094	538.8091007599184	65.704	0.31486	66.031	65.896	66.211	0.32689					23	9	3	0	0	0	0.077188	1	27506	27506		57.249	3.4163	1	1419800			23351	3745	11590	11643	26791	26791					0.06781718368665679
NLFDRVVTL	9	Unmodified	_NLFDRVVTL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8107177615166	2	538.808574	1075.60259	3.3084	0.0017826	-0.74847	-0.00040328	2.56	0.0013793	538.8085765833647	64.5	0.42925	65.907	65.71	66.139	1.4071					35	13	4	0	0	0	0.030128	2	27018	27018;27067		87.258	15.336	1	10046000			23352	3745	11590	11643	26792;26793	26792					0.06781718368665679
NLFDRVVTL	9	Unmodified	_NLFDRVVTL_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49750857-49758735:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8098632693291	2	538.808574	1075.60259	2.9706	0.0016006	-1.1241	-0.00060566	1.8465	0.0009949	538.8086697875946	63.966	0.40359	65.894	65.674	66.077	1.928					40	12	5	0	0	0	0.02298	2	26809	26809;26857		96.936	15.045	1	8139800			23353	3745	11590	11643	26794;26795	26794					0.06781718368665679
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.2833129763603	2	509.2844	1016.55425	2.0143	0.0010259	-0.2806	-0.00014291	1.7337	0.00088295	509.2839040107418	78.053	0.25231	78.053	77.905	78.157	0					14	7	3	0	0	0	0.1388	1	32489	32489		39.95	18.203	1	867610			23354	2924	11591	11644	26796	26796					0.046632247287675455
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1017.563891589642	1	1017.56152	1016.55425	1.9441	0.0019782	1.8459	0.0018783	3.79	0.0038565	1017.5625582863645	76.514	0.31448	77.807	77.699	78.014	1.2938					14	9	2	0	0	0	0.063746	1	32131	32131		62.573	30.267	1	1607300			23355	2924	11591	11644	26797	26797					0.046632247287675455
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.2829162478447	2	509.2844	1016.55425	2.9674	0.0015113	-2.674	-0.0013618	0.29339	0.00014942	509.2828078267841	76.03	0.60915	77.798	77.363	77.972	1.7672					41	19	3	0	0	0	0.057024	2	31923	31868;31923		65.235	23.14	1	3612000			23356	2924	11591	11644	26798;26799	26799					0.046632247287675455
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1017.564318835735	1	1017.56152	1016.55425	2.6684	0.0027153	0.94678	0.0009634	3.6152	0.0036787	1017.5624225271195	76.044	0.31406	77.812	77.658	77.972	1.7672					16	9	2	0	0	0	0.01454	1	31907	31907		103.75	55.402	1	1595000			23357	2924	11591	11644	26800	26800					0.046632247287675455
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1017.56152	1016.55425	1.7967	0.0018282	0.019544	1.9887E-05	1.8162	0.0018481	1017.561603445517	78.04	0.15791	78.04	77.937	78.095	0	0.14136	-0.00077113	NaN	103.75	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260100			23358	2924	11591	11644							0.046632247287675455
NLFETPILA	9	Unmodified	_NLFETPILA_					0	0	0		nc|ENSG00000140545|Q08431-3|MFGE8;ENSG00000140545|ENST00000268150|MFGE8;nc|ENSG00000140545|Q08431-4|MFGE8;chr15:88899496-88906626|92|179.84|0.07|11.4|-|0|None,MFGE8|1;ENST00000560937.1_1_15:89442628-89444976:-|nuORF;nc|ENSG00000140545|Q08431-2|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	nc|ENSG00000140545|Q08431-3|MFGE8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1017.56152	1016.55425	2.278	0.002318	-1.1182	-0.0011378	1.1598	0.0011802	1017.5604718344313	77.618	0.18517	77.935	77.796	77.981	0.31653	0.036435	-0.0019288	NaN	103.75	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	584220			23359	2924	11591	11644							0.046632247287675455
NLFEWHFTV	9	Unmodified	_NLFEWHFTV_					0	0	0		ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.7944213747978	2	596.792924	1191.57129	2.2223	0.0013262	0.20003	0.00011938	2.4223	0.0014456	596.7931857778887	80.431	0.31546	80.431	80.257	80.572	0					26	9	3	0	0	0	0.031324	2	33498	33452;33498		85.357	40.95	1	1564900			23360	5089	11592	11645	26801;26802	26802					-0.016828546654323873
NLFEWHFTV	9	Unmodified	_NLFEWHFTV_					0	0	0		ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.7944824099541	2	596.792924	1191.57129	1.7199	0.0010264	0.99713	0.00059508	2.717	0.0016215	596.7936354720124	79.846	0.37902	80.147	79.942	80.321	0.30047					30	11	3	0	0	0	0.042029	2	33352	33352;33406		74.423	38.296	1	2068300			23361	5089	11592	11645	26803;26804	26803					-0.016828546654323873
NLFEWHFTV	9	Unmodified	_NLFEWHFTV_					0	0	0		ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7944824099541	2	596.792924	1191.57129	2.8347	0.0016917	0.16936	0.00010108	3.004	0.0017928	596.7930089008246	78.881	0.43715	80.148	79.972	80.409	1.2668					40	13	4	0	0	0	0.0092758	3	33124	33082;33124;33170		108	59.651	1	6000000			23362	5089	11592	11645	26805;26806;26807	26806					-0.016828546654323873
NLFEWHFTV	9	Unmodified	_NLFEWHFTV_					0	0	0		ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	ENSG00000198833|ENST00000435041|UBE2J1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.7942993044853	2	596.792924	1191.57129	2.2317	0.0013319	0.50808	0.00030322	2.7398	0.0016351	596.7930520234813	78.387	0.43512	80.122	79.915	80.35	1.735					42	13	4	0	0	0	0.023786	2	32892	32845;32892		96.285	60.241	1	5751100			23363	5089	11592	11645	26808;26809	26809					-0.016828546654323873
NLFLIISITRL	11	Unmodified	_NLFLIISITRL_					0	0	0			REV__nc|ENSG00000141404|P38405-3|GNAL	REV__nc|ENSG00000141404|P38405-3|GNAL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	651.9130126833916	2	651.91083	1301.80711	2.8761	0.0018749	-0.93454	-0.00060924	1.9415	0.0012657	651.9106906282642	105.89	0.11795	106.05	105.98	106.1	0.15859					8	5	2	0	0	0	1.0174	1	45207	45207		2.7352	1.2533	1	41494000	+		23364	10145	11593	11646	26810	26810					0.16827657459180045
NLFLIISITRL	11	Unmodified	_NLFLIISITRL_					0	0	0			REV__nc|ENSG00000141404|P38405-3|GNAL	REV__nc|ENSG00000141404|P38405-3|GNAL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	651.91083	1301.80711	2.8761	0.0018749	-0.93454	-0.00060924	1.9415	0.0012657	651.9106906282642	105.89	0.11795	106.05	105.98	106.1	0.15859	0.0076154	0.00030627	NaN	2.7352	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41494000	+		23365	10145	11593	11646							0.16827657459180045
NLFLIISITRL	11	Unmodified	_NLFLIISITRL_					0	0	0			REV__nc|ENSG00000141404|P38405-3|GNAL	REV__nc|ENSG00000141404|P38405-3|GNAL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	651.91083	1301.80711	3.2832	0.0021404	-2.0992	-0.0013685	1.1841	0.00077191	651.9081846251131	105.86	0.097229	106.03	106	106.09	0.16679	-0.0076154	-0.0012122	NaN	2.7352	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24197000	+		23366	10145	11593	11646							0.16827657459180045
NLFNKYPAL	9	Unmodified	_NLFNKYPAL_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2991210818291	2	540.297842	1078.58113	1.792	0.00096823	0.20794	0.00011235	2	0.0010806	540.2975950706763	49.544	0.59727	51.522	51.161	51.758	1.9772					46	18	3	0	0	0	0.043696	2	20767	20657;20767		92.822	65.938	1	8069900			23367	1374	11594	11647	26811;26812	26812					0.04498333339938654
NLFNKYPAL	9	Unmodified	_NLFNKYPAL_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	540.297842	1078.58113	1.8173	0.00098187	-0.040709	-2.1995E-05	1.7766	0.00095988	540.2975328333154	51.954	0.4994	51.954	51.661	52.161	0	0.27958	-0.00062841	NaN	92.822	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1486700			23368	1374	11594	11647							0.04498333339938654
NLFNKYPAL	9	Unmodified	_NLFNKYPAL_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	540.297842	1078.58113	1.7406	0.00094046	2.4924	0.0013466	4.233	0.0022871	540.299000833621	51.42	0.46509	51.745	51.446	51.911	0.32554	0.070781	0.0021088	NaN	92.822	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1448600			23369	1374	11594	11647							0.04498333339938654
NLFNKYPAL	9	Unmodified	_NLFNKYPAL_					0	0	0		nc|ENSG00000102024|P13797-3|PLS3;nc|ENSG00000102024|P13797-2|PLS3;ENSG00000102024|ENST00000355899|PLS3	nc|ENSG00000102024|P13797-3|PLS3	nc|ENSG00000102024|P13797-3|PLS3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	540.297842	1078.58113	2.7176	0.0014683	-0.5121	-0.00027668	2.2055	0.0011916	540.2971765036306	50.086	0.60262	51.477	51.135	51.737	1.3911	-0.19761	-0.0011378	NaN	92.822	45	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6776800			23370	1374	11594	11647							0.04498333339938654
NLIAGFALF	9	Unmodified	_NLIAGFALF_					0	0	0		tr|A0A7D6W2B1|A0A7D6W2B1_9CLOTTryptophantransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05540PE=4SV=1	tr|A0A7D6W2B1|A0A7D6W2B1_9CLOTTryptophantransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05540PE=4SV=1	tr|A0A7D6W2B1|A0A7D6W2B1_9CLOTTryptophantransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05540PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2758666872978	2	483.276378	964.538203	2.4863	0.0012016	-1.9517	-0.00094322	0.53454	0.00025833	483.2755954804475	52.365	0.28071	52.69	52.496	52.777	0.32554					15	8	2	0	0	0	0.44535	1	21936	21936		18.135	0	1	700930			23371	17030	11595	11648	26813	26813					0.05451563282508687
NLIDLDDLYV	10	Unmodified	_NLIDLDDLYV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.8107177615166	2	596.808436	1191.60232	2.4994	0.0014917	1.1041	0.00065891	3.6035	0.0021506	596.8092217091224	88.239	1.3016	88.474	88.195	89.497	0.23471					66	40	2	0	0	0	0.12205	3	36979	36979;37065;37134		60.074	23.947	1	882610			23372	2270	11596	11649	26814;26815;26816	26814					0.014182538581508197
NLIDLDDLYV	10	Unmodified	_NLIDLDDLYV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1192.615283191204	1	1192.6096	1191.60232	4.0344	0.0048114	-0.48471	-0.00057807	3.5497	0.0042334	1192.6091827942125	87.383	0.49329	88.475	88.241	88.734	1.0918					21	15	2	0	0	0	0.058152	3	36837	36771;36837;36914		92.653	56.526	1	2860600			23373	2270	11596	11649	26817;26818;26819	26818					0.014182538581508197
NLIDLDDLYV	10	Unmodified	_NLIDLDDLYV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8127319216728	2	596.808436	1191.60232	4.6713	0.0027879	1.1089	0.00066183	5.7803	0.0034497	596.8089455507086	87.399	1.7988	88.491	88.09	89.888	1.0918					116	56	4	0	0	0	0.043952	7	36921	36794;36844;36921;36976;37031;37081;37151		103.35	59.495	1	8027500			23374	2270	11596	11649	26820;26821;26822;26823;26824;26825;26826	26822					0.014182538581508197
NLIDLDDLYV	10	Unmodified	_NLIDLDDLYV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8121215701103	2	596.808436	1191.60232	4.6829	0.0027948	1.3393	0.00079933	6.0223	0.0035941	596.8091344689279	86.852	1.2104	88.347	88.122	89.333	1.4953					105	38	4	0	0	0	0.043952	6	36791	36619;36658;36712;36791;36843;36896		114.65	62.381	1	14129000			23375	2270	11596	11649	26827;26828;26829;26830;26831;26832	26830					0.014182538581508197
NLIDLDDLYV	10	Unmodified	_NLIDLDDLYV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8121826052666	2	596.808436	1191.60232	4.7331	0.0028247	0.77116	0.00046024	5.5042	0.003285	596.8083949966481	88.046	0.6373	89.493	89.348	89.985	1.4467					24	19	2	0	0	0	0.65659	2	37159	37159;37227		20.415	6.5085	1	1258700			23376	2270	11596	11649	26833;26834	26833					0.014182538581508197
NLIDRRELAPL	11	Unmodified	_NLIDRRELAPL_					0	0	0		ENSG00000173542|ENST00000309395|MOB1B;ENSG00000114978|ENST00000396049|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B	ENSG00000173542|ENST00000309395|MOB1B	ENSG00000173542|ENST00000309395|MOB1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2588989138603	3	437.257738	1308.75138	2.7867	0.0012185	-1.8886	-0.00082579	0.89817	0.00039273	437.25661761529017	83.584	1.1665	83.855	83.091	84.257	0.27029					77	37	3	0	0	0	1.0372	1	34680	34680		1.0136	0	1	1929400			23377	1892	11597	11650	26835	26835					0.10935824271564343
NLIEETGHFNV	11	Unmodified	_NLIEETGHFNV_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	636.8151122927666	2	636.814584	1271.61462	2.3335	0.001486	-1.1992	-0.00076369	1.1343	0.00072231	636.8144449326142	49.083	0.37879	49.083	48.874	49.253	0					25	11	3	0	0	0	0.055648	2	20472	20472;20525		65.474	25.524	1	1516900			23378	2432	11598	11651	26836;26837	26836					-0.010327096787932533
NLIEETGHFNV	11	Unmodified	_NLIEETGHFNV_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	636.8154785037041	2	636.814584	1271.61462	1.6451	0.0010476	0.3959	0.00025211	2.041	0.0012997	636.8148920732384	48.65	0.34566	48.981	48.756	49.101	0.33034					22	10	3	0	0	0	0.083956	2	20370	20370;20419		59.368	26.583	1	2436700			23379	2432	11598	11651	26838;26839	26838					-0.010327096787932533
NLIEETGHFNV	11	Unmodified	_NLIEETGHFNV_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.8159667849541	2	636.814584	1271.61462	1.9404	0.0012357	0.71987	0.00045842	2.6603	0.0016941	636.8148360704923	47.303	0.41703	48.685	48.473	48.89	1.3825					37	12	5	0	0	0	0.0054879	3	19807	19763;19807;19844		111.31	59.679	1	7331700			23380	2432	11598	11651	26840;26841;26842	26841					-0.010327096787932533
NLIEETGHFNV	11	Unmodified	_NLIEETGHFNV_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.8154785037041	2	636.814584	1271.61462	1.6876	0.0010747	-0.32657	-0.00020796	1.3611	0.00086675	636.814367218945	46.875	0.40646	48.851	48.592	48.999	1.976					35	12	4	0	0	0	0.0028287	3	19625	19581;19625;19670		117.84	79.223	1	4603400			23381	2432	11598	11651	26843;26844;26845	26844					-0.010327096787932533
NLIERPLYTLL	11	Unmodified	_NLIERPLYTLL_					0	0	0			REV__ENSG00000163428|ENST00000295628|LRRC58	REV__ENSG00000163428|ENST00000295628|LRRC58	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.9009277224541	2	672.89792	1343.78129	1.9504	0.0013124	1.5583	0.0010486	3.5088	0.002361	672.8990288818022	84.892	0.39811	86.051	85.905	86.303	1.159					29	12	3	0	0	0	0.10188	1	35649	35649		55.503	0.25413	1	3296700	+		23382	10686	11599	11652	26846	26846					0.12314763216886604
NLIGKIENV	9	Unmodified	_NLIGKIENV_					0	0	0		ENST00000520446.5_1_8:133637625-133687739:-|nuORF;nc|ENSG00000129295|Q86X45-2|DNAAF11;ENSG00000129295|ENST00000620350|DNAAF11	ENST00000520446.5_1_8:133637625-133687739:-|nuORF	ENST00000520446.5_1_8:133637625-133687739:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2959167361259	2	500.295299	998.576045	2.3579	0.0011796	-0.0981	-4.9079E-05	2.2598	0.0011305	500.29530129703085	39.823	0.27337	41.133	40.965	41.238	1.3102					17	8	3	0	0	0	0.075994	1	16696	16696		57.722	15.766	1	2199900			23383	2399	11600	11653	26847	26847					0.07670029477321805
NLILVQLLH	9	Unmodified	_NLILVQLLH_					0	0	0			REV__ENSG00000165300|ENST00000683689|SLITRK5	REV__ENSG00000165300|ENST00000683689|SLITRK5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.8365356326103	2	531.837134	1061.65972	2.7916	0.0014847	-3.017	-0.0016046	-0.22542	-0.00011989	531.8350034229869	93.828	0.38163	93.973	93.751	94.133	0.14493					28	11	3	0	0	0	0.76456	1	39274	39274		4.756	0	1	1837900	+		23384	10775	11601	11654	26848	26848					0.13135185645046477
NLINDFYF	8	Unmodified	_NLINDFYF_					0	0	0			REV__ENSG00000221887|ENST00000408945|HMSD	REV__ENSG00000221887|ENST00000408945|HMSD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1045.499438464642	1	1045.49892	1044.49165	2.9182	0.003051	-2.7734	-0.0028995	0.14489	0.00015148	1045.4957535890326	69.088	1.2161	70.941	70.648	71.864	1.853					65	38	2	0	0	0	0.7006	1	29271	29271		30.225	8.4782	1	1234500	+		23385	11879	11602	11655	26849	26849					-0.02881921339417204
NLISQLTTV	9	Unmodified	_NLISQLTTV_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7875244021416	2	494.787307	987.560061	1.2822	0.00063441	0.48485	0.0002399	1.767	0.00087431	494.786455629616	71.014	0.3513	71.014	70.842	71.194	0					25	10	3	0	0	0	0.037098	2	29569	29569;29610		78.728	10.477	1	3035000			23386	1054	11603	11656	26850;26851	26850					0.065783232404101
NLISQLTTV	9	Unmodified	_NLISQLTTV_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7877380251884	2	494.787307	987.560061	1.9667	0.00097312	0.016147	7.9895E-06	1.9829	0.00098111	494.78655471642077	70.402	0.33902	70.724	70.647	70.986	0.32224					26	10	3	0	0	0	0.04145	1	29468	29468		74.929	12.356	1	4276400			23387	1054	11603	11656	26852	26852					0.065783232404101
NLISQLTTV	9	Unmodified	_NLISQLTTV_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7851745486259	2	494.787307	987.560061	2.1369	0.0010573	-1.1674	-0.00057761	0.9695	0.0004797	494.786489834326	69.377	0.32451	70.742	70.614	70.939	1.3657					20	10	3	0	0	0	0.0080484	1	29098	29098		110.55	21.599	1	11549000			23388	1054	11603	11656	26853	26853					0.065783232404101
NLISQLTTV	9	Unmodified	_NLISQLTTV_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7855407595634	2	494.787307	987.560061	1.442	0.0007135	-1.703	-0.00084261	-0.26094	-0.00012911	494.78650523224366	68.808	0.33109	70.661	70.497	70.828	1.853					25	10	3	0	0	0	0.029061	1	28861	28861		88.954	0	1	9275200			23389	1054	11603	11656	26854	26854					0.065783232404101
NLIVIYIAPF	10	Unmodified	_NLIVIYIAPF_					0	0	0			REV__ENST00000522645.5_1_8:59543991-59572190:-|nuORF	REV__ENST00000522645.5_1_8:59543991-59572190:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	582.3088256716728	2	581.847167	1161.67978	2.771	0.0016123	-2.2068	-0.001284	0.56421	0.00032828	581.8460951858785	60.315	0.3047	61.734	61.566	61.871	1.4196					16	9	2	0	0	0	0.12525	1	25242	25242		6.7232	0	1	1299000	+		23390	13638	11604	11657	26855	26855					0.1054093658497095
NLKELIKDRH	10	Unmodified	_NLKELIKDRH_					0	0	0		ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	633.8753539919853	2	633.369861	1264.72517	1.5759	0.00099812	-0.32309	-0.00020463	1.2528	0.00079349	633.3692311728878	76.904	0.51313	78.671	78.288	78.801	1.7672					25	15	2	0	0	0	0.12533	1	32300	32300		5.7319	0.83484	1	895190			23391	3390	11605	11658	26856	26856					0.10339555100085818
NLKELIKDRH	10	Unmodified	_NLKELIKDRH_					0	0	0		ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	ENSG00000154511|ENST00000370310|DIPK1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	633.369861	1264.72517	2.2419	0.00142	-0.94957	-0.00060143	1.2924	0.00081854	633.3689334927251	77.176	0.53862	78.457	78.124	78.663	1.2809	0.075632	0.00099712	NaN	5.7319	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	994870			23392	3390	11605	11658							0.10339555100085818
NLKKFLKVRYK	11	Unmodified	_NLKKFLKVRYK_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	719.2975341677666	2	718.958646	1435.90274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.009	1	39.317	38.817	39.817	0.30857								0	0	0	0.63775	1	16408	16408		1.1933	0.88631	1				23393	16516	11606	11659	26857	26857					0.20222430370063194
NLKKGILYIDG	11	Unmodified	_NLKKGILYIDG_					0	0	0		tr|A0A7D7A2J0|A0A7D7A2J0_9CLOTTerminaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20095PE=4SV=1	tr|A0A7D7A2J0|A0A7D7A2J0_9CLOTTerminaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20095PE=4SV=1	tr|A0A7D7A2J0|A0A7D7A2J0_9CLOTTerminaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20095PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	309.5242492556572	4	309.185495	1232.71287	0.12399	3.8337E-05	0.85954	0.00026576	0.98353	0.00030409	309.18588002306683	24.663	1.9791	25.904	24.928	26.907	1.241					131	64	3	0	0	0	0.14606	1	10109	10109		1.2148	0	1	1721900			23394	17256	11607	11660	26858	26858					0.105825186370339
NLKKTYFFR	9	Unmodified	_NLKKTYFFR_					0	0	0			REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3455688357353	2	608.84549	1215.67643	4.1017	0.0024973	-3.904	-0.002377	0.19765	0.00012034	608.8431138546017	94.499	0.28594	95.24	95.105	95.391	0.74124					18	8	3	0	0	0	0.83753	1	39747	39747		1.8442	0	1	985020	+		23395	12175	11608	11661	26859	26859					0.07721686530953775
NLKKTYFFR	9	Unmodified	_NLKKTYFFR_					0	0	0			REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8461791872978	2	608.84549	1215.67643	4.6693	0.0028429	-3.6832	-0.0022425	0.98617	0.00060043	608.8427155410985	89.072	0.28603	90.477	90.328	90.614	1.4045					22	8	3	0	0	0	0.83753	1	37508	37508		1.8442	0	1	1549900	+		23396	12175	11608	11661	26860	26860					0.07721686530953775
NLKKTYFFR	9	Unmodified	_NLKKTYFFR_					0	0	0			REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	608.84549	1215.67643	5.1124	0.0031127	-4.128	-0.0025133	0.98439	0.00059934	608.8429999230619	89.548	0.27956	90.568	90.429	90.708	1.0199	0.045574	-0.00016806	NaN	1.8442	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1983900	+		23397	12175	11608	11661							0.07721686530953775
NLKKTYFFR	9	Unmodified	_NLKKTYFFR_					0	0	0			REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	REV__ENST00000258739.8_1_7:6502400-6502604:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	608.84549	1215.67643	4.6693	0.0028429	-3.6832	-0.0022425	0.98617	0.00060043	608.8427155410985	89.072	0.28603	90.477	90.328	90.614	1.4045	-0.045574	0.00037362	NaN	1.8442	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1549900	+		23398	12175	11608	11661							0.07721686530953775
NLKLDAILL	9	Unmodified	_NLKLDAILL_					0	0	0			REV__ENSG00000090402|ENST00000264382|SI	REV__ENSG00000090402|ENST00000264382|SI	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.3510925173759	2	506.823692	1011.63283	1.7518	0.00088788	-3.6388	-0.0018442	-1.8869	-0.00095635	506.8217116939986	49.528	0.18857	51.505	51.381	51.569	1.9772					7	5	2	0	0	0	0.058421	1	20741	20741		45.7	5.7423	1	579420	+		23399	8890	11609	11662	26861	26861					0.12748077033870686
NLKLDRITEK	10	Unmodified	_NLKLDRITEK_					0	0	0		tr|A0A553SU85|A0A553SU85_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_06535PE=3SV=1	tr|A0A553SU85|A0A553SU85_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_06535PE=3SV=1	tr|A0A553SU85|A0A553SU85_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_06535PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	410.2106201052666	3	410.578588	1228.71394	-0.75997	-0.00031203	1.8913	0.00077652	1.1313	0.0004645	410.5797536614082	12.153	0.37349	12.153	11.972	12.345	0					25	11	3	0	0	0	0.12471	1	5085	5085		15.739	0	1	1109300			23400	16684	11610	11663	26862	26862					0.10872733005953705
NLKLVLQRA	9	Unmodified	_NLKLVLQRA_					0	0	0		ENSG00000179826|ENST00000621697|MRGPRX3;ENSG00000179817|ENST00000314254|MRGPRX4;ENSG00000170255|ENST00000526914|MRGPRX1	ENSG00000179826|ENST00000621697|MRGPRX3	ENSG00000179826|ENST00000621697|MRGPRX3	MSMS	GG20161007_CRH_Patient100_A02_02	2	352.2308837771416	3	352.229231	1053.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.725	1	58.048	57.548	58.548	0.32298								0	0	0	0.42693	1	24202	24202		1.0715	0	1				23401	4133	11611	11664	26863	26863					0.14117703876559062
NLKRLWVV	8	Unmodified	_NLKRLWVV_					0	0	0		ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	ENSG00000188997|ENST00000340067|KCTD21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3257934451103	2	514.324194	1026.63383	3.5455	0.0018235	-1.3934	-0.00071666	2.1521	0.0011069	514.324222335186	108.87	0.18167	109.02	108.93	109.12	0.1548					18	8	3	0	0	0	0.89176	1	47107	47107		0.79363	0.10326	1	11902000			23402	4890	11612	11665	26864	26864					0.12158336193419927
NLKTNEWRY	9	Unmodified	_NLKTNEWRY_					0	0	0		KLHL14|p.E447K|1|0.11|ENSG00000197705|chr18:32680499-32680499|C/T|missense_variant	KLHL14|p.E447K|1|0.11|ENSG00000197705|chr18:32680499-32680499|C/T|missense_variant	KLHL14|p.E447K|1|0.11|ENSG00000197705|chr18:32680499-32680499|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5435058474541	3	408.543767	1222.60947	0.032474	1.3267E-05	0.91196	0.00037258	0.94443	0.00038584	408.5441732319128	12.746	0.55992	13.533	13.303	13.863	0.78751					51	18	4	0	0	0	0.70108	1	5381	5381		4.5289	0.94181	1	3462600			23403	7669	11613	11666	26865	26865					0.0070703124922602
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1029.583544909954	1	1029.58265	1028.57538	1.4241	0.0014662	-0.30798	-0.00031709	1.1161	0.0011491	1029.5831991423909	97.892	0.092026	97.892	97.815	97.907	0					4	2	2	0	0	0	0.0033884	1	40919	40919		126.57	11.917	1	20077000			23404	2925	11614	11667	26866	26866					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.2959472537041	2	515.294965	1028.57538	1.6315	0.00084071	1.0578	0.00054509	2.6893	0.0013858	515.2953989025921	97.862	0.15443	97.862	97.784	97.939	0					6	4	2	0	0	0	0.00032761	1	40921	40921		136.33	25.046	1	6996800			23405	2925	11614	11667	26867	26867					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.2950927615166	2	515.294965	1028.57538	2.8911	0.0014898	-2.8494	-0.0014683	0.041707	2.1491E-05	515.2933373292269	97.799	0.098846	97.89	97.838	97.937	0.090881					5	3	2	0	0	0	0.031377	1	40924	40924		85.272	10.343	1	13693000			23406	2925	11614	11667	26868	26868					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1029.590624988079	1	1029.58265	1028.57538	3.1479	0.003241	-1.2826	-0.0013206	1.8653	0.0019204	1029.5842129217995	97.817	0.081543	97.908	97.855	97.937	0.090881					4	2	2	0	0	0	0.0033884	1	40929	40929		126.57	11.917	1	10523000			23407	2925	11614	11667	26869	26869					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2950927615166	2	515.294965	1028.57538	3.9154	0.0020176	-3.0515	-0.0015724	0.86385	0.00044514	515.2933590425502	97.679	0.14787	97.907	97.833	97.981	0.22776					11	4	3	0	0	0	0.00026547	1	41098	41098		139.14	12.573	1	66460000			23408	2925	11614	11667	26870	26870					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1029.583911120892	1	1029.58265	1028.57538	3.0181	0.0031074	-2.3091	-0.0023774	0.70905	0.00073003	1029.5807316001747	97.679	0.11787	97.907	97.833	97.951	0.22776					7	3	3	0	0	0	0.00026547	1	41110	41110		139.14	12.573	1	95016000			23409	2925	11614	11667	26871	26871					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1029.584033191204	1	1029.58265	1028.57538	3.7402	0.0038508	-2.1588	-0.0022226	1.5814	0.0016282	1029.5792878773593	97.63	0.10558	97.886	97.814	97.92	0.25636					6	3	2	0	0	0	0.00026547	1	41076	41076		139.14	12.573	1	55588000			23410	2925	11614	11667	26872	26872					0.06223190037621862
NLLDLLTEV	9	Unmodified	_NLLDLLTEV_					0	0	0		nc|ENSG00000140553|Q9H3U1-2|UNC45A;ENSG00000140553|ENST00000418476|UNC45A;ENST00000556704.1_1_15:91486092-91490047:+|nuORF	nc|ENSG00000140553|Q9H3U1-2|UNC45A	nc|ENSG00000140553|Q9H3U1-2|UNC45A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	515.294965	1028.57538	3.5152	0.0018114	-3.7101	-0.0019118	-0.19497	-0.00010047	515.2931758698801	97.603	0.15258	97.859	97.785	97.937	0.25636	-0.02032	-0.0014969	NaN	139.14	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66387000			23411	2925	11614	11667							0.06223190037621862
NLLEEVFHL	9	Unmodified	_NLLEEVFHL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.3006469607353	2	557.300581	1112.58661	1.7353	0.00096707	-0.05747	-3.2028E-05	1.6778	0.00093504	557.3005902489562	90.437	0.42796	90.437	90.193	90.621	0					25	13	3	0	0	0	0.069258	2	37750	37750;37797		60.39	18.295	1	1641700			23412	3807	11615	11668	26873;26874	26873					0.03482012131780721
NLLEEVFHL	9	Unmodified	_NLLEEVFHL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.3011352419853	2	557.300581	1112.58661	2.5654	0.0014297	0.43121	0.00024031	2.9966	0.00167	557.300754794888	89.742	0.48123	89.966	89.743	90.224	0.22359					30	14	3	0	0	0	0.069258	2	37638	37589;37638		60.39	18.295	1	1612200			23413	3807	11615	11668	26875;26876	26876					0.03482012131780721
NLLEEVFHL	9	Unmodified	_NLLEEVFHL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3036987185478	2	557.300581	1112.58661	5.7578	0.0032088	-1.8844	-0.0010502	3.8735	0.0021587	557.2997832021778	88.916	0.54837	89.972	89.756	90.304	1.0562					46	16	4	0	0	0	0.02596	3	37434	37434;37480;37518		93.883	23.168	1	7032600			23414	3807	11615	11668	26877;26878;26879	26877					0.03482012131780721
NLLEEVFHL	9	Unmodified	_NLLEEVFHL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3035766482353	2	557.300581	1112.58661	4.6323	0.0025816	0.61425	0.00034232	5.2465	0.0029239	557.3010847404842	88.49	0.63864	89.937	89.668	90.306	1.4467					47	19	4	0	0	0	0.028763	3	37322	37240;37282;37322		89.427	22.083	1	7882300			23415	3807	11615	11668	26880;26881;26882	26882					0.03482012131780721
NLLEIAPHL	9	Unmodified	_NLLEIAPHL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.2989074587822	2	510.297842	1018.58113	2.22	0.0011329	-2.1935	-0.0011193	0.026491	1.3518E-05	510.29645942978703	63.817	0.30196	63.817	63.651	63.952	0					16	9	2	0	0	0	0.11478	2	26589	26589;26644		44.407	19.008	1	1849500			23416	1898	11616	11669	26883;26884	26883					0.07258333339939327
NLLEIAPHL	9	Unmodified	_NLLEIAPHL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.2982665896416	2	510.297842	1018.58113	2.0575	0.00105	-0.98396	-0.00050211	1.0736	0.00054784	510.29632499893404	63.284	0.34509	63.614	63.412	63.757	0.32974					21	10	3	0	0	0	0.076627	1	26496	26496		57.471	26.835	1	1338000			23417	1898	11616	11669	26885	26885					0.07258333339939327
NLLEIAPHL	9	Unmodified	_NLLEIAPHL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2982360720634	2	510.297842	1018.58113	3.2107	0.0016384	-2.4567	-0.0012537	0.75391	0.00038472	510.29640976842853	62.029	0.41307	63.447	63.206	63.619	1.4177					37	12	4	0	0	0	0.03795	2	25979	25979;26030		77.984	31.963	1	7091800			23418	1898	11616	11669	26886;26887	26886					0.07258333339939327
NLLEIAPHL	9	Unmodified	_NLLEIAPHL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2976562380791	2	510.297842	1018.58113	2.5461	0.0012993	-2.3289	-0.0011884	0.21718	0.00011083	510.29616789411955	61.46	0.47842	63.417	63.179	63.657	1.9571					37	14	4	0	0	0	0.03795	2	25819	25770;25819		77.984	29.638	1	5172000			23419	1898	11616	11669	26888;26889	26889					0.07258333339939327
NLLEKDYFGL	10	Unmodified	_NLLEKDYFGL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2;ENST00000542652.6_1_18:5434093-5466319:-|nuORF;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;EPB41L3|p.P190Hfs*78|1|0.13|ENSG00000082397|chr18:5438071-5438071|G/-|frameshift_variant;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3197509646416	2	606.318971	1210.62339	2.1979	0.0013326	-0.096463	-5.8487E-05	2.1014	0.0012741	606.3189649598913	64.979	0.35078	64.979	64.784	65.135	0					19	10	3	0	0	0	0.40874	1	27072	27072		32.786	0	1	694490			23420	1101	11617	11670	26890	26890					0.02650263957639254
NLLEKDYFGL	10	Unmodified	_NLLEKDYFGL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2;ENST00000542652.6_1_18:5434093-5466319:-|nuORF;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;EPB41L3|p.P190Hfs*78|1|0.13|ENSG00000082397|chr18:5438071-5438071|G/-|frameshift_variant;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3227416872978	2	606.318971	1210.62339	2.7359	0.0016588	2.6717	0.0016199	5.4076	0.0032787	606.3206443976424	63.25	0.34407	64.663	64.471	64.816	1.4134					20	10	3	0	0	0	0.078293	2	26505	26505;26557		67.838	0	1	1917900			23421	1101	11617	11670	26891;26892	26891					0.02650263957639254
NLLEKDYFGL	10	Unmodified	_NLLEKDYFGL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2;ENST00000542652.6_1_18:5434093-5466319:-|nuORF;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;EPB41L3|p.P190Hfs*78|1|0.13|ENSG00000082397|chr18:5438071-5438071|G/-|frameshift_variant;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3204833865166	2	606.318971	1210.62339	2.6993	0.0016366	2.4291	0.0014728	5.1284	0.0031094	606.3204638854002	62.668	0.28287	64.612	64.438	64.721	1.9444					15	8	2	0	0	0	0.078293	1	26280	26280		67.838	0	1	2553300			23422	1101	11617	11670	26893	26893					0.02650263957639254
NLLEKDYFGL	10	Unmodified	_NLLEKDYFGL_					0	0	0		EPB41L1-C20orf152|1|fusion;nc|ENSG00000088367|Q9H4G0-2|EPB41L1;EPB41L1-C20orf152|6|fusion;ENSG00000088367|ENST00000338074|EPB41L1;EPB41L1-C20orf152|12|fusion;EPB41L1-C20orf152|11|fusion;EPB41L1-C20orf152|5|fusion;EPB41L1-C20orf152|7|fusion;EPB41L1-C20orf152|9|fusion;EPB41L1-C20orf152|10|fusion;EPB41L1-C20orf152|2|fusion;nc|ENSG00000088367|Q9H4G0-4|EPB41L1;EPB41L1-C20orf152|8|fusion;EPB41L1-C20orf152|3|fusion;EPB41L1-C20orf152|4|fusion;nc|ENSG00000079819|O43491-3|EPB41L2;nc|ENSG00000079819|O43491-4|EPB41L2;nc|ENSG00000079819|O43491-2|EPB41L2;ENSG00000079819|ENST00000337057|EPB41L2;ENST00000542652.6_1_18:5434093-5466319:-|nuORF;nc|ENSG00000082397|Q9Y2J2-4|EPB41L3;nc|ENSG00000082397|Q9Y2J2-2|EPB41L3;EPB41L3|p.P190Hfs*78|1|0.13|ENSG00000082397|chr18:5438071-5438071|G/-|frameshift_variant;nc|ENSG00000082397|Q9Y2J2-3|EPB41L3;ENSG00000082397|ENST00000341928|EPB41L3	EPB41L1-C20orf152|1|fusion	EPB41L1-C20orf152|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	606.318971	1210.62339	1.8065	0.0010953	0.57995	0.00035164	2.3865	0.001447	606.3190965083375	64.41	0.2606	64.739	64.626	64.886	0.32899	-0.0092458	-0.00060054	NaN	67.838	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920060			23423	1101	11617	11670							0.02650263957639254
NLLEQNNKV	9	Unmodified	_NLLEQNNKV_					0	0	0			REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.2949096560478	2	536.293288	1070.57202	1.6703	0.00089575	2.1154	0.0011345	3.7856	0.0020302	536.2942584288598	41.652	0.25728	41.652	41.531	41.789	0					19	7	3	0	0	0	0.53525	1	17449	17449		13.906	2.2658	1	1723600	+		23424	15810	11618	11671	26894	26894					0.039559399836207376
NLLIESPQV	9	Unmodified	_NLLIESPQV_					0	0	0		EXPH5|p.E1682Dfs*12|1|0.05|ENSG00000110723|chr11:108510461-108510462|-/A|frameshift_variant;nc|ENSG00000110723|Q8NEV8-2|EXPH5;ENSG00000110723|ENST00000265843|EXPH5	EXPH5|p.E1682Dfs*12|1|0.05|ENSG00000110723|chr11:108510461-108510462|-/A|frameshift_variant	EXPH5|p.E1682Dfs*12|1|0.05|ENSG00000110723|chr11:108510461-108510462|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.1119872927666	2	506.787307	1011.56006	1.7857	0.00090495	0.39808	0.00020174	2.1837	0.0011067	506.787536922491	55.089	0.31326	56.494	56.328	56.642	1.4048					16	10	2	0	0	0	0.1006	1	23099	23099		15.847	4.2069	1	1150700			23425	1716	11619	11672	26895	26895					0.05474323240434842
NLLIVFKRC	9	Unmodified	_NLLIVFKRC_					0	0	0		nc|ENSG00000188994|O60281-2|ZNF292;ENSG00000188994|ENST00000369577|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.3348876833916	2	553.331162	1104.64777	1.9259	0.0010657	3.045	0.0016849	4.9709	0.0027506	553.3331802209041	80.714	0.49818	81.005	80.84	81.338	0.29056					39	15	3	0	0	0	0.85019	1	33769	33769		0.52476	0.066424	1	1107100			23426	4889	11620	11673	26896	26896					0.09963245630206075
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8246948122978	2	506.823692	1011.63283	2.0615	0.0010448	-0.19624	-9.9458E-05	1.8653	0.00094538	506.8235297624365	75.075	0.47057	75.075	74.904	75.374	0					33	14	3	0	0	0	0.06749	2	31274	31274;31332		75.761	25.828	1	3829100			23427	3317	11621	11674	26897;26898	26897					0.12748077033859317
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.8254272341728	2	506.823692	1011.63283	2.932	0.001486	-0.27164	-0.00013767	2.6603	0.0013483	506.8234600309768	74.534	0.5605	74.859	74.613	75.174	0.32463					37	17	3	0	0	0	0.040715	3	31177	31127;31177;31234		92.653	30.081	1	3687800			23428	3317	11621	11674	26899;26900;26901	26900					0.12748077033859317
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8210021853447	2	506.823692	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.19	1	74.519	74.019	75.019	1.3297								0	0	0	0.17143	1	30717	30717		36.506	5.2379	1				23429	3317	11621	11674	26902	26902					0.12748077033859317
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8252136111259	2	506.823692	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.298	1	74.628	74.128	75.128	1.3297								0	0	0	3.3936E-07	1	30761	30761		147.06	58.156	1				23430	3317	11621	11674	26903	26903					0.12748077033859317
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8263427615166	2	506.823692	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.423	1	74.741	74.241	75.241	1.318								0	0	0	0.025852	1	30813	30813		103.35	44.675	1				23431	3317	11621	11674	26904	26904					0.12748077033859317
NLLKLIAEV	9	Unmodified	_NLLKLIAEV_					0	0	0		ENST00000479309.6_1_2:169690730-169745796:-|nuORF;ENSG00000152253|ENST00000282074|SPC25	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	ENST00000479309.6_1_2:169690730-169745796:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8254272341728	2	506.823692	1011.63283	2.7004	0.0013686	0.46367	0.000235	3.1641	0.0016036	506.8239995926361	72.805	0.82402	74.615	74.353	75.177	1.8101					54	25	4	0	0	0	0.0051619	3	30524	30480;30524;30562		147.06	65.169	1	7308600			23432	3317	11621	11674	26905;26906;26907	26906					0.12748077033859317
NLLKSLHSAI	10	Unmodified	_NLLKSLHSAI_					0	0	0			REV__tr|A0A7D6W1F1|A0A7D6W1F1_9CLOTUronateisomeraseOS=ClostridiumintestinaleOX=36845GN=uxaCPE=3SV=1	REV__tr|A0A7D6W1F1|A0A7D6W1F1_9CLOTUronateisomeraseOS=ClostridiumintestinaleOX=36845GN=uxaCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	547.8366577029228	2	548.329673	1094.64479	2.6338	0.0014442	2.3728	0.0013011	5.0066	0.0027453	548.3308211805448	65.428	0.59309	66.827	66.348	66.941	1.3989					40	18	3	0	0	0	0.12461	1	27322	27322		14.838	2.3067	1	2000000	+		23433	15591	11622	11675	26908	26908					0.10125693777035849
NLLLHLLLR	9	Unmodified	_NLLLHLLLR_					0	0	0			REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	REV__nc|ENSG00000186976|Q5THR3-5|EFCAB6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8668701052666	2	552.866226	1103.7179	2.713	0.0014999	-0.50793	-0.00028081	2.2051	0.0012191	552.8657791516833	107.52	0.23187	107.58	107.48	107.71	0.052444					43	11	5	0	0	0	0.85019	1	45989	45989		0.52476	0	1	183510000	+		23434	11520	11623	11676	26909	26909					0.170188672903123
NLLLRMYKL	9	Unmodified	_NLLLRMYKL_					0	0	0		ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.5720092654228	3	388.570488	1162.68964	2.6219	0.0010188	1.3897	0.00054	4.0116	0.0015588	388.5710009925846	90.331	0.55959	90.541	90.275	90.835	0.20904					57	17	4	0	0	0	0.85206	2	37839	37839;37879		0.26902	0	1	31577000			23435	5619	11624	11677	26910;26911	26910					0.11479801318728278
NLLLRMYKL	9	Unmodified	_NLLLRMYKL_					0	0	0		ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	ENST00000261250.7_1_12:4598305-4598689:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.5730468630791	3	388.570488	1162.68964	4.4407	0.0017255	1.5413	0.00059891	5.982	0.0023244	388.57107898025527	89.642	0.52937	90.662	90.397	90.926	1.0199					54	16	4	0	0	0	0.85206	1	37818	37818		0.26902	0	1	10538000			23436	5619	11624	11677	26912	26912					0.11479801318728278
NLLNYSLRIF	10	Unmodified	_NLLNYSLRIF_					0	0	0			REV__MER72B_dup8|chr1:206066627-206067269:-|3.5601120063877|0.1593671915957709|4.48|421.0|23|3|sense	REV__MER72B_dup8|chr1:206066627-206067269:-|3.5601120063877|0.1593671915957709|4.48|421.0|23|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8582031130791	2	626.856055	1251.69756	1.998	0.0012525	0.12163	7.6242E-05	2.1197	0.0013287	626.856219987788	80.866	0.55833	82.562	82.394	82.953	1.6959					41	17	3	0	0	0	0.38174	1	34013	34013		34.402	2.0962	1	3802600	+		23437	14363	11625	11678	26913	26913					0.08177651839832834
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8400756716728	2	523.839677	1045.6648	2.207	0.0011561	-0.57414	-0.00030076	1.6329	0.00085536	523.8392821739242	50.446	0.76178	50.446	50.12	50.881	0					75	24	5	0	0	0	0.031145	6	20997	20960;20997;21035;21074;21116;21170		92.822	48.415	1	12604000			23438	5227;4094	11626	11679	26914;26915;26916;26917;26918;26919	26915					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.8408691287041	2	523.839677	1045.6648	1.9008	0.0009957	0.26879	0.0001408	2.1696	0.0011365	523.8397496478468	49.854	0.88074	50.185	49.727	50.608	0.33019					80	27	4	0	0	0	0.040497	6	20878	20781;20830;20878;20917;20960;21018		85.357	51.254	1	15122000			23439	5227;4094	11626	11679	26920;26921;26922;26923;26924;26925	26922					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	349.5624877810478	3	349.56221	1045.6648	1.3566	0.00047421	-0.2793	-9.7634E-05	1.0773	0.00037657	349.56221524908	49.853	1.3323	50.183	49.651	50.983	0.33019					130	42	5	0	0	0	0.28372	5	20864	20819;20864;20903;20944;20982		26.268	13.226	1	19458000			23440	5227;4094	11626	11679	26926;26927;26928;26929;26930	26927					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8406860232353	2	523.839677	1045.6648	1.6297	0.00085368	-0.051658	-2.7061E-05	1.578	0.00082661	523.8395417734592	48.42	1.1776	49.808	49.241	50.418	1.388					108	37	4	0	0	0	0.040497	7	20195	20098;20148;20195;20234;20274;20314;20368		97.075	60.609	1	30245000			23441	5227;4094	11626	11679	26931;26932;26933;26934;26935;26936;26937	26933					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.5625793337822	3	349.56221	1045.6648	0.28149	9.8397E-05	0.46848	0.00016376	0.74997	0.00026216	349.56240118313167	48.371	1.674	49.758	49.241	50.915	1.388					146	53	4	0	0	0	0.21592	9	20169	20132;20169;20208;20247;20286;20326;20370;20420;20525		31.268	16.863	1	57760000			23442	5227;4094	11626	11679	26938;26939;26940;26941;26942;26943;26944;26945;26946	26939					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.5623046755791	3	349.56221	1045.6648	1.9397	0.00067804	-1.2992	-0.00045413	0.64053	0.00022391	349.56180446100143	47.76	1.8498	49.736	49.187	51.037	1.976					182	59	5	0	0	0	0.1109	8	20040	19900;19952;20001;20040;20080;20137;20212;20320		45.7	22.963	1	32659000			23443	5227;4094	11626	11679	26947;26948;26949;26950;26951;26952;26953;26954	26950					0.14379489507655308
NLLPKLHIV	9	Unmodified	_NLLPKLHIV_					0	0	0		ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000169504|ENST00000374379|CLIC4;ENSG00000213719|ENST00000375784|CLIC1	ENSG00000213719|ENST00000375784|CLIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8406860232353	2	523.839677	1045.6648	2.3996	0.001257	-0.87969	-0.00046082	1.5199	0.00079617	523.8391891846434	47.813	1.3862	49.789	49.25	50.636	1.976					116	44	4	0	0	0	0.040497	6	20002	19901;19951;20002;20052;20091;20138		97.075	53.126	1	26587000			23444	5227;4094	11626	11679	26955;26956;26957;26958;26959;26960	26957					0.14379489507655308
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	517.2921630740166	2	516.831852	1031.64915	2.0828	0.0010765	-0.085431	-4.4153E-05	1.9974	0.0010323	516.8320647334809	44.276	0.68969	44.276	43.842	44.532	0					60	21	4	0	0	0	0.047433	1	18479	18479		39.957	19.504	1	6253000			23445	1795	11627	11680	26961	26961					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	344.8907653689384	3	344.890327	1031.64915	1.3503	0.00046569	-0.44318	-0.00015285	0.90708	0.00031284	344.8902959586632	43.549	0.89096	43.873	43.353	44.244	0.32388					80	27	5	0	0	0	0.28372	3	18302	18265;18302;18343		26.268	13.381	1	7711100			23446	1795	11627	11680	26962;26963;26964	26963					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.2940551638603	2	516.831852	1031.64915	1.9375	0.0010013	0.18196	9.404E-05	2.1194	0.0010954	516.8320213632054	43.61	0.83048	43.934	43.321	44.151	0.32388					61	25	4	0	0	0	0.029304	1	18344	18344		48.346	30.199	1	6542900			23447	1795	11627	11680	26965	26965					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	344.8903381228447	3	344.890327	1031.64915	0.80004	0.00027593	-0.42911	-0.000148	0.37093	0.00012793	344.890272072268	41.846	1.0329	43.172	42.587	43.62	1.3254					101	32	4	0	0	0	0.28372	6	17494	17443;17494;17546;17597;17635;17677		26.268	14.773	1	37314000			23448	1795	11627	11680	26966;26967;26968;26969;26970;26971	26967					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.8330566287041	2	516.831852	1031.64915	2.2711	0.0011738	0.18193	9.4029E-05	2.453	0.0012678	516.8319221414697	41.939	1.1942	43.279	42.665	43.859	1.3399					102	37	4	0	0	0	0.040497	4	17609	17508;17558;17609;17649		85.357	53.24	1	24121000			23449	1795	11627	11680	26972;26973;26974;26975	26974					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	344.8900634646416	3	344.890327	1031.64915	1.4257	0.00049171	-1.3435	-0.00046335	0.082222	2.8358E-05	344.88994940040305	41.476	0.90117	43.369	42.736	43.637	1.8927					93	28	4	0	0	0	0.20244	5	17340	17246;17286;17340;17388;17442		32.786	14.773	1	26846000			23450	1795	11627	11680	26976;26977;26978;26979;26980	26978					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8332397341728	2	516.831852	1031.64915	2.0815	0.0010758	-0.064466	-3.3318E-05	2.017	0.0010424	516.8318522938524	41.417	0.96721	43.31	42.8	43.767	1.8927					89	30	4	0	0	0	0.04812	3	17389	17285;17337;17389		77.984	41.94	1	25527000			23451	1795	11627	11680	26981;26982;26983	26983					0.1345920299061163
NLLPKLHVV	9	Unmodified	_NLLPKLHVV_					0	0	0		ENST00000484572.1_1_6:45870949-45882153:-|nuORF;nc|ENSG00000112782|Q9NZA1-3|CLIC5;ENSG00000112782|ENST00000339561|CLIC5;nc|ENSG00000112782|Q9NZA1|CLIC5	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	ENST00000484572.1_1_6:45870949-45882153:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	344.890327	1031.64915	1.2193	0.00042054	-2.3932	-0.00082538	-1.1738	-0.00040484	344.88908711350405	42.291	0.15659	44.212	44.133	44.29	1.9211	0.16963	-0.0019518	NaN	26.268	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	272400			23452	1795	11627	11680							0.1345920299061163
NLLQVLEKV	9	Unmodified	_NLLQVLEKV_					0	0	0		nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF;nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;CON__Q0VBK2	nc|ENSG00000167767|Q6KB66-3|KRT80	nc|ENSG00000167767|Q6KB66-3|KRT80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3270141482353	2	528.326599	1054.63865	1.9651	0.0010382	-0.56971	-0.00030099	1.3954	0.00073724	528.3263416088431	75.155	0.43892	75.155	74.904	75.342	0					35	13	3	0	0	0	0.014947	2	31300	31253;31300		103.42	14.466	1	5353700		+	23453	6702	11628	11681	26984;26985	26985					0.11351175545519254
NLLQVLEKV	9	Unmodified	_NLLQVLEKV_					0	0	0		nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF;nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;CON__Q0VBK2	nc|ENSG00000167767|Q6KB66-3|KRT80	nc|ENSG00000167767|Q6KB66-3|KRT80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3271972537041	2	528.326599	1054.63865	2.7819	0.0014698	-0.85599	-0.00045224	1.9259	0.0010175	528.3261454337244	74.603	0.4355	74.928	74.677	75.113	0.32463					37	13	4	0	0	0	0.026411	2	31201	31153;31201		93.166	14.438	1	6078200		+	23454	6702	11628	11681	26986;26987	26987					0.11351175545519254
NLLQVLEKV	9	Unmodified	_NLLQVLEKV_					0	0	0		nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF;nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;CON__Q0VBK2	nc|ENSG00000167767|Q6KB66-3|KRT80	nc|ENSG00000167767|Q6KB66-3|KRT80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3269531130791	2	528.326599	1054.63865	3.5046	0.0018516	-1.0923	-0.00057708	2.4124	0.0012745	528.3259937142756	73.406	0.5034	74.724	74.463	74.966	1.318					50	15	4	0	0	0	0.0061207	4	30849	30735;30772;30810;30849		117.76	28.807	1	20457000		+	23455	6702	11628	11681	26988;26989;26990;26991	26991					0.11351175545519254
NLLQVLEKV	9	Unmodified	_NLLQVLEKV_					0	0	0		nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF;nc|ENSG00000167767|Q6KB66-2|KRT80;ENSG00000167767|ENST00000394815|KRT80;CON__Q6KB66-1;CON__Q0VBK2	nc|ENSG00000167767|Q6KB66-3|KRT80	nc|ENSG00000167767|Q6KB66-3|KRT80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3271972537041	2	528.326599	1054.63865	2.7841	0.0014709	-0.63457	-0.00033526	2.1496	0.0011357	528.3262276348136	72.813	0.57146	74.623	74.321	74.893	1.8101					55	17	4	0	0	0	0.0011269	4	30574	30488;30535;30574;30621		133.05	33.253	1	21877000		+	23456	6702	11628	11681	26992;26993;26994;26995	26994					0.11351175545519254
NLLRIMPAV	9	Unmodified	_NLLRIMPAV_					0	0	0		ENST00000417497.5_1_22:28393691-28395609:+|nuORF;ENST00000454741.5_1_22:28394730-28395609:+|nuORF	ENST00000417497.5_1_22:28393691-28395609:+|nuORF	ENST00000417497.5_1_22:28393691-28395609:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8749572634697	3	342.8758	1025.60557	-1.6052	-0.00055039	-0.14007	-4.8027E-05	-1.7453	-0.00059842	342.87564392034113	37.206	1.0173	37.206	36.643	37.66	0					116	47	3	0	0	0	0.82114	2	15554	15554;15595		2.4985	0.59211	1	16067000			23457	6415	11629	11682	26996;26997	26996					0.09379270221802471
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2021972537041	4	328.204219	1308.78777	-2.0442	-0.00067092	-1.3499	-0.00044303	-3.3941	-0.0011139	328.20352267034457	39.607	1.16	39.607	39.171	40.331	0					130	36	5	0	0	0	1.0254	1	16749	16749		2.2527	0.79761	1	23377000			23458	2540	11630	11683	26998	26998					0.14572701168253843
NLLTVQLKQPR	11	Unmodified	_NLLTVQLKQPR_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;ENST00000493587.1_1_8:100883622-100887891:+|nuORF	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2033264040947	4	328.204219	1308.78777	-1.9481	-0.00063939	-1.2481	-0.00040963	-3.1962	-0.001049	328.20360582121924	42.223	1.6218	42.223	41.435	43.057	0					154	51	4	0	0	0	0.99899	3	17760	17502;17540;17760		3.8459	1.1107	1	11871000			23459	2540	11630	11683	26999;27000;27001	27001					0.14572701168253843
NLLVALPRW	9	Unmodified	_NLLVALPRW_					0	0	0		nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	MSMS	GG20161007_CRH_Patient100_A02_02	2	361.2216064333916	3	361.222076	1080.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.76	1	104.82	104.32	105.32	0.056801								0	0	0	0.42693	1	44263	44263		1.0715	0	1				23460	7843	11631	11684	27002	27002					0.10730318847822673
NLLVALPRW	9	Unmodified	_NLLVALPRW_					0	0	0		nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	MSMS	GG20161007_CRH_Patient100_W632_01	3	361.2212707400322	3	361.222076	1080.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.21	1	106.37	105.87	106.87	0.15781								0	0	0	0.42693	1	45438	45438		1.1933	0	1				23461	7843	11631	11684	27003	27003					0.10730318847822673
NLLVALPRW	9	Unmodified	_NLLVALPRW_					0	0	0		nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	nc|ENSG00000102539|O43193-2|MLNR	MSMS	GG20161007_CRH_Patient100_W632_01	3	361.2219421267509	3	361.222076	1080.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.28	1	109.44	108.94	109.94	0.15898								0	0	0	0.42693	1	47429	47429		0.26902	0	1				23462	7843	11631	11684	27004	27004					0.10730318847822673
NLMDIKIGL	9	Unmodified	_NLMDIKIGL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;ENST00000514579.1_1_5:75950824-75955864:+|nuORF;ENST00000560020.1_1_15:91017736-91017973:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7945739626884	2	508.794078	1015.5736	2.1896	0.0011141	-2.4626	-0.001253	-0.273	-0.0001389	508.79300376590163	67.303	0.64186	68.681	68.365	69.007	1.3778					50	20	4	0	0	0	0.057024	2	28276	28225;28276		65.235	0	1	40986000			23463	2927;3119	11632	11685	27005;27006	27006					0.06643857748008486
NLMDIKIGL	9	Unmodified	_NLMDIKIGL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;ENST00000514579.1_1_5:75950824-75955864:+|nuORF;ENST00000560020.1_1_15:91017736-91017973:+|nuORF;ENSG00000145703|ENST00000274364|IQGAP2;nc|ENSG00000145703|Q13576-3|IQGAP2;nc|ENSG00000145703|Q13576-2|IQGAP2	ENSG00000140575|ENST00000268182|IQGAP1;ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7943603396416	2	508.794078	1015.5736	1.5957	0.00081187	-2.4956	-0.0012697	-0.89993	-0.00045788	508.79317059010395	66.799	1.1667	68.688	68.214	69.381	1.8889					71	37	4	0	0	0	0.023786	2	28015	28015;28065		96.285	0	1	39452000			23464	2927;3119	11632	11685	27007;27008	27007					0.06643857748008486
NLMEMVAQL	9	Unmodified	_NLMEMVAQL_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7626220583916	2	524.76192	1047.50929	1.8726	0.00098269	1.4004	0.00073486	3.273	0.0017176	524.7624402067422	84.44	0.25457	85.599	85.464	85.719	1.159					16	7	3	0	0	0	0.12251	1	35432	35432		41.84	21.386	1	1218400			23465	153	11633	11686	27009	27009					-0.012566654004331212
NLMEMVAQL	9	Unmodified	_NLMEMVAQL_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.7631103396416	2	524.76192	1047.50929	1.9881	0.0010433	-0.31944	-0.00016763	1.6686	0.00087564	524.7612141555275	83.995	0.27259	85.633	85.444	85.717	1.6379					13	8	3	0	0	0	0.18809	1	35215	35215		34.402	19.563	1	1433900			23466	153	11633	11686	27010	27010					-0.012566654004331212
NLMEQLFGA	9	Unmodified	_NLMEQLFGA_					0	0	0		ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7548705935478	2	511.75241	1021.49027	4.0583	0.0020768	-0.15395	-7.8784E-05	3.9043	0.001998	511.75243492786984	81.839	0.33922	83.052	82.915	83.255	1.2125					22	10	3	0	0	0	0.23535	1	34351	34351		29.082	9.8246	1	1207900			23467	2659	11634	11687	27011	27011					-0.019618786998194082
NLMEQLFGA	9	Unmodified	_NLMEQLFGA_					0	0	0		ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	ENSG00000135338|ENST00000369846|LCA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7533447146416	2	511.75241	1021.49027	3.9247	0.0020085	-0.41332	-0.00021152	3.5114	0.001797	511.75226090631054	81.429	0.30563	83.125	82.953	83.258	1.6959					20	9	3	0	0	0	0.35391	1	34159	34159		22.736	3.4793	1	1078700			23468	2659	11634	11687	27012	27012					-0.019618786998194082
NLMEQPIKV	9	Unmodified	_NLMEQPIKV_					0	0	0		ENST00000589036.1_1_17:39927815-39942960:-|nuORF;ENSG00000173801|ENST00000393931|JUP	ENST00000589036.1_1_17:39927815-39942960:-|nuORF	ENST00000589036.1_1_17:39927815-39942960:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.2918578982353	2	536.296985	1070.57942	1.7945	0.00096239	-3.5562	-0.0019072	-1.7617	-0.00094481	536.295094382242	41.197	0.27917	41.514	41.371	41.65	0.31683					26	9	3	0	0	0	0.075994	1	17289	17289		57.722	26.454	1	2201400			23469	4300	11635	11688	27013	27013					0.04694956259686478
NLMEQPIKV	9	Unmodified	_NLMEQPIKV_					0	0	0		ENST00000589036.1_1_17:39927815-39942960:-|nuORF;ENSG00000173801|ENST00000393931|JUP	ENST00000589036.1_1_17:39927815-39942960:-|nuORF	ENST00000589036.1_1_17:39927815-39942960:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2980224490166	2	536.296985	1070.57942	1.6109	0.00086393	-4.2137	-0.0022598	-2.6028	-0.0013959	536.2951993828765	39.061	0.31331	40.898	40.784	41.097	1.8366					28	9	4	0	0	0	0.046715	2	16385	16385;16435		70.332	30.382	1	9410100			23470	4300	11635	11688	27014;27015	27014					0.04694956259686478
NLNFLRLNNV	10	Unmodified	_NLNFLRLNNV_					0	0	0		tr|A0A7D6VTN3|A0A7D6VTN3_9CLOTBppUN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11745PE=4SV=1	tr|A0A7D6VTN3|A0A7D6VTN3_9CLOTBppUN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11745PE=4SV=1	tr|A0A7D6VTN3|A0A7D6VTN3_9CLOTBppUN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11745PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8469726443291	2	608.843479	1215.67241	4.6473	0.0028295	-1.0727	-0.00065313	3.5745	0.0021763	608.8437151382814	87.104	0.37019	88.599	88.425	88.796	1.4953					27	11	3	0	0	0	0.87699	1	36740	36740		3.9444	0	1	1902700			23471	16925	11636	11689	27016	27016					0.07319597037258063
NLNKKIPTI	9	Unmodified	_NLNKKIPTI_					0	0	0		ENSG00000249709|ENST00000339282|ZNF564;ENST00000593682.1_1_19:12637262-12688404:-|nuORF	ENSG00000249709|ENST00000339282|ZNF564	ENSG00000249709|ENST00000339282|ZNF564	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	520.7540771365166	2	520.826766	1039.63898	1.0905	0.00056798	1.0136	0.00052793	2.1042	0.0010959	521.3301144763072	77.4	0.15844	79.151	79.073	79.231	1.7514					6	4	2	0	0	0	0.11071	1	32442	32442		6.7232	0	1	182720			23472	5375	11637	11690	27017	27017					0.12074595265357857
NLNSIVPSV	9	Unmodified	_NLNSIVPSV_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.5273925662041	1	942.525473	941.518196	1.2049	0.0011356	0.57193	0.00053906	1.7768	0.0016747	942.5253814063826	55.273	0.40118	56.683	56.449	56.85	1.4099					21	13	2	0	0	0	0.04145	1	23176	23176		74.929	3.0067	1	963400			23473	2722	11638	11691	27018	27018					0.04509767551905952
NLNSIVPSV	9	Unmodified	_NLNSIVPSV_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7680541872978	2	471.766374	941.518196	1.3531	0.00063833	4.3998	0.0020757	5.7529	0.002714	471.76824631294045	54.854	0.37622	56.823	56.583	56.959	1.9684					17	12	2	0	0	0	0.033504	2	23002	22949;23002		81.89	21.816	1	1921700			23474	2722	11638	11691	27019;27020	27020					0.04509767551905952
NLPINGNGKQ	10	Unmodified	_NLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7848388552666	2	527.78563	1053.55671	0.48798	0.00025755	1.1557	0.00060997	1.6437	0.00086751	527.7861069638619	15.339	0.37888	15.469	15.335	15.714	0.13022					20	11	2	0	0	0	0.57775	1	6361	6361		24.021	5.8856	1	603170			23475	1049	11639	11692	27021	27021					0.03207073186422349
NLPINGNGKQ	10	Unmodified	_NLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7861205935478	2	527.78563	1053.55671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.843	1	15.74	15.24	16.24	0.89664								0	0	0	0.27497	1	6159	6159		34.402	4.5611	1				23476	1049	11639	11692	27022	27022					0.03207073186422349
NLPINGNGKQ	10	Unmodified	_NLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.78563	1053.55671	0.12906	6.8116E-05	0.49873	0.00026322	0.62779	0.00033134	527.7861288637464	14.919	0.50939	15.688	15.26	15.77	0.76937	0.10944	-0.00026064	NaN	24.021	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	553640			23477	1049	11639	11692							0.03207073186422349
NLRFWTGDSK	10	Unmodified	_NLRFWTGDSK_					0	0	0			REV__CON__Q28085	REV__CON__Q28085	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5437499880791	3	408.543767	1222.60947	0.42548	0.00017383	0.44518	0.00018188	0.87067	0.00035571	408.54410820128203	13.848	1.1511	13.947	13.78	14.931	0.099441					68	36	4	0	0	0	0.85124	1	5718	5718		6.1918	0	1	3050000	+	+	23478	8385	11640	11693	27023	27023					0.007070312492032826
NLRKKSKE	8	Unmodified	_NLRKKSKE_					0	0	0			REV__ENSG00000174776|ENST00000682715|WDR49	REV__ENSG00000174776|ENST00000682715|WDR49	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.8074218630791	2	501.806365	1001.59818	1.7263	0.00086625	0.66556	0.00033398	2.3918	0.0012002	501.8063087978377	78.581	1.2359	78.581	78.001	79.237	0					73	39	3	0	0	0	0.89178	1	32626	32626		0.69038	0	1	2518700	+		23479	11133	11641	11694	27024	27024					0.09744253945757464
NLRKLLLK	8	Unmodified	_NLRKLLLK_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3491393923759	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.138	1	95.138	94.638	95.638	0								0	0	0	1.0178	1	39759	39759		0.79363	0	1				23480	5944	11642	11695	27025	27025					0.18231195744579054
NLRRVVQK	8	Unmodified	_NLRRVVQK_					0	0	0			REV__ENST00000540647.5_1_12:132402872-132405903:+|nuORF	REV__ENST00000540647.5_1_12:132402872-132405903:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	338.2199279665947	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.18	1	101.36	100.86	101.86	0.17773								0	0	0	1.0178	1	42576	42576		0.40072	0	1		+		23481	11209	11643	11696	27026	27026					0.12479666419562818
NLRTEPSAN	9	Unmodified	_NLRTEPSAN_					0	0	0		ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.5043517947197	3	334.505201	1000.49377	0.59796	0.00020002	-3.3627	-0.0011248	-2.7647	-0.00092482	334.5041606846249	70.652	0.48096	72.49	72.291	72.772	1.8378					30	15	3	0	0	0	0.72858	1	29622	29622		6.1918	0.46	1	3121200			23482	4720	11644	11697	27027	27027					-0.006454926016203899
NLRTEPSAN	9	Unmodified	_NLRTEPSAN_					0	0	0		ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	334.505201	1000.49377	1.1946	0.0003996	-3.7642	-0.0012592	-2.5696	-0.00085956	334.50408501394105	71.153	0.35622	72.494	72.333	72.689	1.3415	0.0019708	-0.00020564	NaN	6.1918	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3149900			23483	4720	11644	11697							-0.006454926016203899
NLRTEPSAN	9	Unmodified	_NLRTEPSAN_					0	0	0		ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	ENSG00000184949|ENST00000535113|FAM227A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	334.505201	1000.49377	0.59796	0.00020002	-3.3627	-0.0011248	-2.7647	-0.00092482	334.5041606846249	70.652	0.48096	72.49	72.291	72.772	1.8378	-0.0019708	0.00019731	NaN	6.1918	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3121200			23484	4720	11644	11697							-0.006454926016203899
NLSKKIPGV	9	Unmodified	_NLSKKIPGV_					0	0	0		ENSG00000196646|ENST00000343979|ZNF136;ENST00000464860.1_1_19:12296590-12298813:+|nuORF	ENSG00000196646|ENST00000343979|ZNF136	ENSG00000196646|ENST00000343979|ZNF136	MSMS	GG20161007_CRH_Patient100_A02_01	1	478.3022949099541	2	478.300384	954.586216	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.77	1	103.77	103.27	104.27	0								0	0	0	0.42693	1	43641	43641		3.9444	1.6417	1				23485	4954	11645	11698	27028	27028					0.10710637202578255
NLSLLLAAMF	10	Unmodified	_NLSLLLAAMF_					0	0	0			REV__ENST00000310942.8_1_17:77758954-77759245:+|nuORF	REV__ENST00000310942.8_1_17:77758954-77759245:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8097411990166	2	546.809728	1091.6049	0.75711	0.000414	-2.2181	-0.0012129	-1.461	-0.00079887	546.808302867855	35.912	0.28951	37.729	37.581	37.871	1.8176					29	16	2	0	0	0	0.24174	1	15030	15030		43.858	3.901	1	4903500	+		23486	12364	11646	11699	27029	27029					0.06276430782099851
NLTNRRKYI	9	Unmodified	_NLTNRRKYI_					0	0	0		nc|ENSG00000205754|G3V0H7|SLCO1B7;nc|ENSG00000257046|F5H094|SLCO1B3-SLCO1B7	nc|ENSG00000205754|G3V0H7|SLCO1B7	nc|ENSG00000205754|G3V0H7|SLCO1B7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3434936404228	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.82604	1	32393	32393		2.3027	0	1	9065200			23487	7983	11647	11700	27030	27030					0.09147016757151505
NLTRKAKGT	9	Unmodified	_NLTRKAKGT_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.8001586794853	2	494.79854	987.582528	3.2706	0.0016183	0.11462	5.6714E-05	3.3852	0.001675	494.79858354315303	89.374	0.51236	89.597	89.327	89.839	0.2236					38	15	3	0	0	0	0.8432	1	37416	37416		1.4819	0.79152	1	3717500	+		23488	11734	11648	11701	27031	27031					0.08823967428713786
NLTRKAKGT	9	Unmodified	_NLTRKAKGT_					0	0	0			REV__ENSG00000198753|ENST00000361971|PLXNB3	REV__ENSG00000198753|ENST00000361971|PLXNB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	494.79854	987.582528	2.0147	0.00099686	0.86004	0.00042555	2.8747	0.0014224	494.79896396428256	89.52	0.47329	89.52	89.274	89.747	0	-0.099761	0.0008517	NaN	1.4819	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3413500	+		23489	11734	11648	11701							0.08823967428713786
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.2982971072197	2	494.29731	986.580068	1.42	0.0007019	1.3205	0.00065273	2.7405	0.0013546	494.2977921786114	79.437	0.33829	79.437	79.206	79.545	0					24	10	3	0	0	0	0.09539	2	33068	33021;33068		50.855	26.181	1	2733300			23490	4724;858	11649	11702	27032;27033	27033					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	987.5883056521416	1	987.587344	986.580068	1.7291	0.0017076	-0.42861	-0.00042329	1.3005	0.0012843	987.587034395239	79.407	0.40279	79.407	79.206	79.609	0					30	12	3	0	0	0	0.046276	2	33094	33041;33094		70.716	30.758	1	3752800			23491	4724;858	11649	11702	27034;27035	27035					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	987.5873901247978	1	987.587344	986.580068	1.8128	0.0017903	-1.4412	-0.0014233	0.37161	0.000367	987.5858593925516	78.876	0.36078	79.186	79.018	79.379	0.30933					29	11	3	0	0	0	0.046276	2	33006	32962;33006		70.716	26.857	1	5305700			23492	4724;858	11649	11702	27036;27037	27037					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.2972900271416	2	494.29731	986.580068	2.3409	0.0011571	-1.0393	-0.00051372	1.3016	0.00064336	494.296650582625	78.876	0.24062	79.186	79.047	79.288	0.30932					15	7	3	0	0	0	0.10294	1	32983	32983		48.346	25.197	1	2303700			23493	4724;858	11649	11702	27038	27038					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2979919314384	2	494.29731	986.580068	2.4786	0.0012252	1.1252	0.00055618	3.6038	0.0017814	494.2980218306684	77.871	0.33953	79.152	78.95	79.289	1.2809					29	10	3	0	0	0	0.076627	2	32684	32640;32684		57.471	33.913	1	5650400			23494	4724;858	11649	11702	27039;27040	27040					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	987.5892211794853	1	987.587344	986.580068	3.6996	0.0036537	-1.4564	-0.0014383	2.2432	0.0022154	987.5857842542774	77.871	0.45847	79.152	78.918	79.377	1.2809					33	14	3	0	0	0	0.046276	2	32672	32672;32724		70.716	30.267	1	14189000			23495	4724;858	11649	11702	27041;27042	27041					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2993347048759	2	494.29731	986.580068	1.1766	0.00058159	1.4841	0.00073357	2.6607	0.0013152	494.2979570172749	77.465	0.37895	79.216	78.882	79.261	1.7514					24	11	3	0	0	0	0.051699	2	32431	32431;32476		67.344	37.119	1	5581700			23496	4724;858	11649	11702	27043;27044	27043					0.08624118971044936
NLVAIPVYV	9	Unmodified	_NLVAIPVYV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1;ENSG00000070718|ENST00000396926|AP3M2	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	987.5890380740166	1	987.587344	986.580068	1.5446	0.0015254	-0.37232	-0.0003677	1.1723	0.0011577	987.587515692482	77.422	0.37373	79.173	78.946	79.32	1.7514					26	11	3	0	0	0	0.046276	2	32448	32448;32485		70.716	28.876	1	10792000			23497	4724;858	11649	11702	27045;27046	27045					0.08624118971044936
NLVALALIWD	10	Unmodified	_NLVALALIWD_					0	0	0			REV__ENSG00000125910|ENST00000246115|S1PR4	REV__ENSG00000125910|ENST00000246115|S1PR4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.2842895388603	2	564.326599	1126.63865	2.5685	0.0014495	0.33307	0.00018796	2.9016	0.0016374	564.3266256311957	77.166	1.0431	78.447	78.124	79.167	1.2809					50	32	2	0	0	0	0.12461	1	32652	32652		10.074	0	1	801050	+		23498	9685	11650	11703	27047	27047					0.08039175545513899
NLVALALIWD	10	Unmodified	_NLVALALIWD_					0	0	0			REV__ENSG00000125910|ENST00000246115|S1PR4	REV__ENSG00000125910|ENST00000246115|S1PR4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	564.326599	1126.63865	1.3811	0.00077938	-0.4445	-0.00025084	0.93657	0.00052853	564.3262613045097	78.677	0.43983	78.677	78.409	78.848	0	0.12669	-0.00091874	NaN	10.074	13	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217520	+		23499	9685	11650	11703							0.08039175545513899
NLVALALIWD	10	Unmodified	_NLVALALIWD_					0	0	0			REV__ENSG00000125910|ENST00000246115|S1PR4	REV__ENSG00000125910|ENST00000246115|S1PR4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	564.326599	1126.63865	1.7275	0.0009749	1.3046	0.00073622	3.0321	0.0017111	564.8285536164256	78.19	0.41412	78.499	78.196	78.61	0.30933	-0.05134	0.0010554	NaN	10.074	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	397200	+		23500	9685	11650	11703							0.08039175545513899
NLVALALIWD	10	Unmodified	_NLVALALIWD_					0	0	0			REV__ENSG00000125910|ENST00000246115|S1PR4	REV__ENSG00000125910|ENST00000246115|S1PR4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.326599	1126.63865	1.8535	0.001046	-0.36007	-0.0002032	1.4934	0.00084278	564.325783047045	76.811	0.57573	78.578	78.386	78.962	1.7672	0.028025	-0.00082345	NaN	10.074	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	701650	+		23501	9685	11650	11703							0.08039175545513899
NLVFILHKWP	10	Unmodified	_NLVFILHKWP_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	633.3713867068291	2	633.871508	1265.72846	2.1268	0.0013481	-1.6822	-0.0010663	0.44466	0.00028186	633.8704349804531	82.531	0.73357	82.811	82.52	83.254	0.2802					30	23	2	0	0	0	0.12555	1	34588	34588		0.40072	0	1	1394800	+		23502	9912	11651	11704	27048	27048					0.10622849944752488
NLVKEREKRK	10	Unmodified	_NLVKEREKRK_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3956176638603	2	650.39641	1298.77827	1.7603	0.0011449	-0.73761	-0.00047974	1.0227	0.00066515	650.3957346932383	79.983	0.94347	80.283	79.813	80.757	0.30047					54	29	3	0	0	0	0.89803	1	33482	33482		1.4819	0.28856	1	1235100			23503	1782	11652	11705	27049	27049					0.14082932882729438
NLVKEREKRK	10	Unmodified	_NLVKEREKRK_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	650.39641	1298.77827	2.4639	0.0016025	-0.50962	-0.00033145	1.9543	0.0012711	650.3964677702687	79.285	0.28065	80.552	80.504	80.785	1.2668	0.12671	-6.3331E-05	NaN	1.4819	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	498730			23504	1782	11652	11705							0.14082932882729438
NLVKEREKRK	10	Unmodified	_NLVKEREKRK_					0	0	0		ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	ENSG00000112367|ENST00000230124|FIG4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	650.39641	1298.77827	2.2334	0.0014526	-0.074116	-4.8205E-05	2.1593	0.0014044	650.3960430896009	78.706	0.7136	80.441	80.319	81.033	1.735	0.015498	0.00050317	NaN	1.4819	29	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	765700			23505	1782	11652	11705							0.14082932882729438
NLVKLAFLL	9	Unmodified	_NLVKLAFLL_					0	0	0			REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2268554568291	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.9	1	116.9	116.4	117.4	0								0	0	0	0.42693	1	50414	50414		0.23584	0	1		+		23506	10895	11653	11706	27050	27050					0.14500971276152086
NLVKLAFLL	9	Unmodified	_NLVKLAFLL_					0	0	0			REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	REV__ENST00000405142.1_1_16:4744898-4745177:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2277099490166	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.7	1	119.7	119.2	120.2	0								0	0	0	0.42693	1	51540	51540		0.23584	0	1		+		23507	10895	11653	11706	27051	27051					0.14500971276152086
NLVKSSSKR	9	Unmodified	_NLVKSSSKR_					0	0	0		nc|ENSG00000126016|Q4VCS5-2|AMOT;ENSG00000126016|ENST00000371959|AMOT	nc|ENSG00000126016|Q4VCS5-2|AMOT	nc|ENSG00000126016|Q4VCS5-2|AMOT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8034240603447	2	509.803823	1017.59309	1.8267	0.00093127	-1.7834	-0.0009092	0.04329	2.2069E-05	509.80256647450057	68.992	1.3504	68.992	68.642	69.993	0					76	42	2	0	0	0	0.83213	1	28921	28921		2.0598	0	1	1769100			23508	2297	11654	11707	27052	27052					0.08499950083148633
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3693115115166	2	606.370195	1210.72584	2.1933	0.0013299	-2.7785	-0.0016848	-0.58528	-0.0003549	606.3676705113386	74.993	1.614	74.993	74.014	75.628	0					92	50	3	0	0	0	0.89803	2	31200	31200;31277		1.4819	0	1	2132600			23509	2131	11655	11708	27053;27054	27053					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3692504763603	2	606.370195	1210.72584	2.1371	0.0012959	-1.3018	-0.00078939	0.83528	0.00050649	606.369326866515	77.237	1.3452	77.237	77.063	78.409	0					115	42	3	0	0	0	0.89803	1	32383	32383		1.4819	0.95714	1	8472300			23510	2131	11655	11708	27055	27055					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3707763552666	2	606.370195	1210.72584	2.1033	0.0012754	-1.0887	-0.00066014	1.0146	0.00061521	606.3695221883263	78.534	1.3564	78.534	78.22	79.576	0					70	43	3	0	0	0	0.89803	1	32718	32718		1.4819	0.41044	1	1759700			23511	2131	11655	11708	27056	27056					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3706542849541	2	606.370195	1210.72584	2.4745	0.0015004	-2.6405	-0.0016011	-0.16606	-0.00010069	606.368031336412	74.732	1.5436	75.056	74.138	75.681	0.32464					95	48	2	0	0	0	0.89803	3	31281	31281;31334;31388		1.4819	0	1	3106300			23512	2131	11655	11708	27057;27058;27059	27057					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3709594607353	2	606.370195	1210.72584	1.7725	0.0010748	-0.12374	-7.5033E-05	1.6488	0.00099978	606.3700463354238	77.81	0.60337	78.126	77.919	78.522	0.31564					47	18	3	0	0	0	0.89803	1	32659	32659		1.4819	0.41044	1	2709800			23513	2131	11655	11708	27060	27060					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3705932497978	2	606.370195	1210.72584	1.6377	0.00099307	0.22698	0.00013763	1.8647	0.0011307	606.3701128856401	78.412	0.86637	78.721	78.453	79.319	0.30933					56	27	3	0	0	0	0.89803	1	32765	32765		1.4819	0	1	1689500			23514	2131	11655	11708	27061	27061					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3724243044853	2	606.370195	1210.72584	2.5372	0.0015385	0.72807	0.00044148	3.2653	0.00198	606.370635971915	76.828	0.85344	78.122	77.983	78.836	1.2938					41	26	2	0	0	0	0.89803	1	32375	32375		1.4819	0	1	2266000			23515	2131	11655	11708	27062	27062					0.12890394539795125
NLVLAKNRRQ	10	Unmodified	_NLVLAKNRRQ_					0	0	0		ENST00000481603.1_1_11:5631742-5632569:+|nuORF;nc|ENSG00000121236|Q9C030-3|TRIM6;nc|ENSG00000121236|Q9C030|TRIM6;ENSG00000121236|ENST00000380097|TRIM6	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	ENST00000481603.1_1_11:5631742-5632569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3739501833916	2	606.370195	1210.72584	1.2866	0.00078016	0.9665	0.00058606	2.2531	0.0013662	606.3721141992958	77.239	0.50484	78.99	78.786	79.29	1.7514					35	15	3	0	0	0	0.89803	1	32443	32443		1.4819	0	1	1578900			23516	2131	11655	11708	27063	27063					0.12890394539795125
NLVLDYHQSRA	11	Unmodified	_NLVLDYHQSRA_					0	0	0			REV__KLHL20-DARS2|1|fusion	REV__KLHL20-DARS2|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2313720583916	3	439.229959	1314.66805	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.26	1	103.45	102.95	103.95	0.18066								0	0	0	0.63775	1	43461	43461		0.40827	0	1		+		23517	8422	11656	11709	27064	27064					0.023300878237023426
NLVLFGIWFI	10	Unmodified	_NLVLFGIWFI_					0	0	0		tr|A0A7D6VMX5|A0A7D6VMX5_9CLOTGlycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13505PE=3SV=1	tr|A0A7D6VMX5|A0A7D6VMX5_9CLOTGlycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13505PE=3SV=1	tr|A0A7D6VMX5|A0A7D6VMX5_9CLOTGlycosylhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13505PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3578369021416	2	611.35516	1220.69577	2.531	0.0015474	2.3507	0.0014371	4.8817	0.0029844	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.89803	1	33144	33144		1.6526	0	1	7141600			23518	16720	11657	11710	27065	27065					0.09424642821886664
NLVPMIIHL	9	Unmodified	_NLVPMIIHL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3151122927666	2	525.312438	1048.61032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.579	1	76.901	76.401	77.401	0.32163								0	0	0	0.30487	1	32028	32028		18.135	6.4947	1				23519	4789	11658	11711	27066	27066					0.0879615436460881
NLVPMIIHL	9	Unmodified	_NLVPMIIHL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3140136599541	2	525.312438	1048.61032	2.6613	0.001398	1.0665	0.00056023	3.7278	0.0019582	525.3130529945853	75.425	0.30744	76.731	76.555	76.862	1.3063					17	9	2	0	0	0	0.070759	1	31651	31651		59.795	29.57	1	1924400			23520	4789	11658	11711	27067	27067					0.0879615436460881
NLVPMIIHL	9	Unmodified	_NLVPMIIHL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3137084841728	2	525.312438	1048.61032	2.8244	0.0014837	0.59106	0.00031049	3.4154	0.0017942	525.312600065269	74.902	0.27917	76.683	76.575	76.854	1.7817					15	8	2	0	0	0	0.070759	1	31425	31425		59.795	25.693	1	1760900			23521	4789	11658	11711	27068	27068					0.0879615436460881
NLVPTLLL	8	Unmodified	_NLVPTLLL_					0	0	0			REV__OR51L1|p.P286T|1|0.77|ENSG00000176798|chr11:4999838-4999838|C/A|missense_variant	REV__OR51L1|p.P286T|1|0.77|ENSG00000176798|chr11:4999838-4999838|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7876769900322	2	441.786579	881.558604	0.75971	0.00033563	1.9986	0.00088296	2.7583	0.0012186	441.7874244420148	25.602	0.45965	27.319	27.152	27.612	1.7167					48	14	4	0	0	0	0.89178	1	10737	10737		0.69038	0	1	37311000	+		23522	14589	11659	11712	27069	27069					0.11308733942348681
NLVQRNVNIF	10	Unmodified	_NLVQRNVNIF_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA;nc|ENSG00000134333|P00338-2|LDHA	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8461181521416	2	608.843479	1215.67241	5.7078	0.0034751	-2.5689	-0.001564	3.1389	0.0019111	608.8421886964717	88.49	0.35361	89.546	89.369	89.723	1.0562					25	10	3	0	0	0	0.89646	1	37341	37341		1.8442	0	1	2191800			23523	2611	11660	11713	27070	27070					0.07319597037258063
NLVQRNVNIF	10	Unmodified	_NLVQRNVNIF_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-5|LDHA;nc|ENSG00000134333|P00338-2|LDHA	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	608.843479	1215.67241	2.5161	0.0015319	0.6498	0.00039563	3.1659	0.0019275	608.8444717028509	89.438	0.19327	89.662	89.519	89.712	0.22359	0.12052	0.0023019	NaN	1.8442	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	193480			23524	2611	11660	11713							0.07319597037258063
NLVRKKRTNL	10	Unmodified	_NLVRKKRTNL_					0	0	0			REV__tr|A0A553SQW4|A0A553SQW4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07335PE=4SV=1	REV__tr|A0A553SQW4|A0A553SQW4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.5981933474541	3	414.598206	1240.77279	3.3159	0.0013748	-3.0123	-0.0012489	0.30362	0.00012588	414.596868345118	91.325	0.5256	92.691	92.406	92.932	1.366					49	16	4	0	0	0	0.88314	1	38440	38440		1.5923	0.89462	1	9602500	+		23525	15138	11661	11714	27071	27071					0.16203254090964947
NLVRRLTDRI	10	Unmodified	_NLVRRLTDRI_					0	0	0			REV__nc|ENSG00000135930|O60573-2|EIF4E2	REV__nc|ENSG00000135930|O60573-2|EIF4E2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3842040896416	2	628.383303	1254.75205	1.7095	0.0010742	-0.070005	-4.399E-05	1.6395	0.0010302	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.89803	1	33245	33245		1.4819	0	1	7710600	+		23526	9963	11662	11715	27072	27072					0.13486663711250912
NLVRRLTDRI	10	Unmodified	_NLVRRLTDRI_					0	0	0			REV__nc|ENSG00000135930|O60573-2|EIF4E2	REV__nc|ENSG00000135930|O60573-2|EIF4E2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3845092654228	2	628.383303	1254.75205	1.2793	0.0008039	-0.45253	-0.00028436	0.82678	0.00051954	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.88579	1	32664	32664		2.9952	0.49676	1	6175000	+		23527	9963	11662	11715	27073	27073					0.13486663711250912
NLVSFLETV	9	Unmodified	_NLVSFLETV_					0	0	0		ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2846252322197	2	511.281857	1020.54916	5.9796	0.0030572	-0.48234	-0.00024661	5.4972	0.0028106	511.28134726985087	89.039	0.38616	90.095	89.853	90.239	1.0562					20	11	2	0	0	0	0.22154	1	37511	37511		30.637	0.41173	1	2604200			23528	2383	11663	11716	27074	27074					0.039709208661633966
NLVSFLETV	9	Unmodified	_NLVSFLETV_					0	0	0		ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2848388552666	2	511.281857	1020.54916	5.0412	0.0025775	1.2174	0.00062242	6.2585	0.0031999	511.28239254998124	88.555	0.32246	90.002	89.856	90.179	1.4467					22	9	3	0	0	0	0.15635	2	37325	37325;37379		37.974	9.4872	1	2039600			23529	2383	11663	11716	27075;27076	27075					0.039709208661633966
NLVSFLETV	9	Unmodified	_NLVSFLETV_					0	0	0		ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.281857	1020.54916	2.4941	0.0012752	-1.6897	-0.00086391	0.80441	0.00041128	511.28066863332907	90.386	0.24547	90.386	90.225	90.47	0	0.2502	-0.002282	NaN	37.974	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	469130			23530	2383	11663	11716							0.039709208661633966
NLVSFLETV	9	Unmodified	_NLVSFLETV_					0	0	0		ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	ENSG00000128791|ENST00000262120|TWSG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.281857	1020.54916	2.7806	0.0014217	1.3377	0.00068394	4.1183	0.0021056	511.7835564149426	89.838	0.25789	90.062	89.903	90.161	0.2236	-0.074545	0.00081367	NaN	37.974	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	392530			23531	2383	11663	11716							0.039709208661633966
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2627441287041	2	415.260728	828.506903	2.7952	0.0011607	2.6968	0.0011199	5.492	0.0022806	415.2617106276002	85.326	0.65533	85.579	85.196	85.851	0.25227					41	20	3	0	0	0	0.89051	1	35654	35654		2.3027	0	1	2256000	+		23532	11662	11664	11717	27077	27077					0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2625915408134	2	415.260728	828.506903	4.9437	0.0020529	3.2556	0.0013519	8.1992	0.0034048	415.2619421888041	87.922	0.57162	88.978	88.669	89.24	1.0562					36	17	3	0	0	0	0.89051	2	37054	37054;37104		2.3027	0	1	2867400	+		23533	11662	11664	11717	27078;27079	27078					0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2634765505791	2	415.260728	828.506903	2.1166	0.00087894	2.8487	0.0011829	4.9653	0.0020619	415.2618196665433	84.214	0.45354	85.815	85.553	86.006	1.6002					23	14	3	0	0	0	0.89178	1	35293	35293		0.69038	0	1	2251100	+		23534	11662	11664	11717	27080	27080					0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2627746462822	2	415.260728	828.506903	4.6229	0.0019197	2.4025	0.00099767	7.0254	0.0029174	415.26144992129736	87.358	0.49716	88.853	88.581	89.078	1.4953					38	15	3	0	0	0	0.89051	2	36808	36808;36859		2.3027	0	1	3161800	+		23535	11662	11664	11717	27081;27082	27081					0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	415.260728	828.506903	2.8384	0.0011787	3.9985	0.0016604	6.8369	0.0028391	415.26219494873794	88.473	0.50487	88.707	88.477	88.982	0.23471	0.024487	0.00043024	NaN	2.3027	41	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3664000	+		23536	11662	11664	11717							0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	415.260728	828.506903	4.2821	0.0017782	3.7168	0.0015434	7.9989	0.0033216	415.2620831476119	87.396	0.46304	88.488	88.241	88.704	1.0918	-0.19454	0.00019625	NaN	2.3027	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3158700	+		23537	11662	11664	11717							0.08578990248440732
NLVVLKSG	8	Unmodified	_NLVVLKSG_					0	0	0			REV__ENSG00000197147|ENST00000330947|LRRC8B	REV__ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	415.260728	828.506903	4.6229	0.0019197	2.4025	0.00099767	7.0254	0.0029174	415.26144992129736	87.358	0.49716	88.853	88.581	89.078	1.4953	0.17005	-0.00089526	NaN	2.3027	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3161800	+		23538	11662	11664	11717							0.08578990248440732
NLVVQIVQRR	10	Unmodified	_NLVVQIVQRR_					0	0	0			REV__ENSG00000160445|ENST00000291900|ZER1	REV__ENSG00000160445|ENST00000291900|ZER1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.9227477908134	3	408.922689	1223.74624	0.74148	0.00030321	-0.84311	-0.00034477	-0.10163	-4.1557E-05	408.9223501836721	92.462	0.54696	92.462	92.197	92.744	0					61	17	5	0	0	0	0.88314	1	38703	38703		1.5923	0.13716	1	35869000	+		23539	10603	11665	11718	27083	27083					0.1433156519960903
NLWDLTDASVV	11	Unmodified	_NLWDLTDASVV_					0	0	0		ENSG00000108679|ENST00000262776|LGALS3BP	ENSG00000108679|ENST00000262776|LGALS3BP	ENSG00000108679|ENST00000262776|LGALS3BP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8140746951103	2	616.81151	1231.60847	2.3647	0.0014586	0.092178	5.6856E-05	2.4569	0.0015154	616.8122441812615	80.486	0.30424	81.737	81.608	81.912	1.2512					20	9	3	0	0	0	0.14563	1	33797	33797		47.594	30.481	1	2032700			23540	1645	11666	11719	27084	27084					0.0019277208962193981
NLWDLTDASVV	11	Unmodified	_NLWDLTDASVV_					0	0	0		ENSG00000108679|ENST00000262776|LGALS3BP	ENSG00000108679|ENST00000262776|LGALS3BP	ENSG00000108679|ENST00000262776|LGALS3BP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8107787966728	2	616.81151	1231.60847	0.88381	0.00054515	0.95614	0.00058976	1.84	0.0011349	616.8132924939117	80.149	0.26966	81.865	81.695	81.964	1.7167					15	8	3	0	0	0	0.044684	1	33610	33610		67.838	33.436	1	814840			23541	1645	11666	11719	27085	27085					0.0019277208962193981
NLWLKLGRL	9	Unmodified	_NLWLKLGRL_					0	0	0		ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1015807986259	3	371.569476	1111.6866	1.7604	0.0006541	0.63777	0.00023698	2.3981	0.00089108	371.56967032265305	80.477	0.52854	80.768	80.529	81.058	0.29055					42	16	3	0	0	0	0.11954	1	33734	33734		0.26902	0	1	1780000			23542	3459	11667	11720	27086	27086					0.13522294256222267
NLWLKLGRL	9	Unmodified	_NLWLKLGRL_					0	0	0		ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1013061404228	3	371.569476	1111.6866	1.9623	0.00072914	0.70974	0.00026372	2.6721	0.00099285	371.5695905121495	78.67	0.52892	80.405	80.101	80.63	1.735					37	16	3	0	0	0	0.11954	1	32928	32928		0.26902	0	1	1279000			23543	3459	11667	11720	27087	27087					0.13522294256222267
NLWRLQGRF	9	Unmodified	_NLWRLQGRF_					0	0	0			REV__ENST00000449985.6_1_17:8077268-8077460:-|nuORF	REV__ENST00000449985.6_1_17:8077268-8077460:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2236816287041	3	397.22448	1188.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.76	1	100.76	100.26	101.26	0								0	0	0	0.42693	1	42180	42180		0.96228	0.26461	1		+		23544	13127	11668	11721	27088	27088					0.06483051448253718
NLYGLLHGL	9	Unmodified	_NLYGLLHGL_					0	0	0		chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1;nc|ENSG00000116584|Q92974-3|ARHGEF2;YY1AP1-ARHGEF2|1|fusion;YY1AP1-ARHGEF2|14|fusion;YY1AP1-ARHGEF2|13|fusion;YY1AP1-ARHGEF2|8|fusion;YY1AP1-ARHGEF2|7|fusion;YY1AP1-ARHGEF2|16|fusion;YY1AP1-ARHGEF2|15|fusion;YY1AP1-ARHGEF2|4|fusion;YY1AP1-ARHGEF2|3|fusion;YY1AP1-ARHGEF2|6|fusion;YY1AP1-ARHGEF2|5|fusion;YY1AP1-ARHGEF2|12|fusion;YY1AP1-ARHGEF2|11|fusion;YY1AP1-ARHGEF2|10|fusion;YY1AP1-ARHGEF2|9|fusion;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;YY1AP1-ARHGEF2|2|fusion	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2844116091728	2	500.284734	998.554916	1.4681	0.00073446	-3.3382	-0.0016701	-1.8702	-0.00093561	500.2834577005824	69.486	0.37813	69.486	69.265	69.643	0					19	11	2	0	0	0	0.20838	1	28928	28928		32.117	5.7757	1	1642900			23545	160	11669	11722	27089	27089					0.05558064168462806
NLYGLLHGL	9	Unmodified	_NLYGLLHGL_					0	0	0		chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1;nc|ENSG00000116584|Q92974-3|ARHGEF2;YY1AP1-ARHGEF2|1|fusion;YY1AP1-ARHGEF2|14|fusion;YY1AP1-ARHGEF2|13|fusion;YY1AP1-ARHGEF2|8|fusion;YY1AP1-ARHGEF2|7|fusion;YY1AP1-ARHGEF2|16|fusion;YY1AP1-ARHGEF2|15|fusion;YY1AP1-ARHGEF2|4|fusion;YY1AP1-ARHGEF2|3|fusion;YY1AP1-ARHGEF2|6|fusion;YY1AP1-ARHGEF2|5|fusion;YY1AP1-ARHGEF2|12|fusion;YY1AP1-ARHGEF2|11|fusion;YY1AP1-ARHGEF2|10|fusion;YY1AP1-ARHGEF2|9|fusion;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;YY1AP1-ARHGEF2|2|fusion	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2832214236259	2	500.284734	998.554916	2.0492	0.0010252	-1.5056	-0.00075324	0.54354	0.00027193	500.283493935118	68.873	0.94243	69.196	68.936	69.878	0.32224					64	29	4	0	0	0	0.13437	1	28815	28815		40.449	8.3316	1	2694100			23546	160	11669	11722	27090	27090					0.05558064168462806
NLYGLLHGL	9	Unmodified	_NLYGLLHGL_					0	0	0		chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1;nc|ENSG00000116584|Q92974-3|ARHGEF2;YY1AP1-ARHGEF2|1|fusion;YY1AP1-ARHGEF2|14|fusion;YY1AP1-ARHGEF2|13|fusion;YY1AP1-ARHGEF2|8|fusion;YY1AP1-ARHGEF2|7|fusion;YY1AP1-ARHGEF2|16|fusion;YY1AP1-ARHGEF2|15|fusion;YY1AP1-ARHGEF2|4|fusion;YY1AP1-ARHGEF2|3|fusion;YY1AP1-ARHGEF2|6|fusion;YY1AP1-ARHGEF2|5|fusion;YY1AP1-ARHGEF2|12|fusion;YY1AP1-ARHGEF2|11|fusion;YY1AP1-ARHGEF2|10|fusion;YY1AP1-ARHGEF2|9|fusion;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;YY1AP1-ARHGEF2|2|fusion	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2850524783134	2	500.284734	998.554916	1.9262	0.00096363	-1.1756	-0.00058814	0.75054	0.00037548	500.2841984727427	67.623	0.39313	69.001	68.789	69.182	1.3778					32	12	4	0	0	0	0.098957	2	28395	28348;28395		49.669	9.2203	1	7106500			23547	160	11669	11722	27091;27092	27092					0.05558064168462806
NLYGLLHGL	9	Unmodified	_NLYGLLHGL_					0	0	0		chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1;nc|ENSG00000116584|Q92974-3|ARHGEF2;YY1AP1-ARHGEF2|1|fusion;YY1AP1-ARHGEF2|14|fusion;YY1AP1-ARHGEF2|13|fusion;YY1AP1-ARHGEF2|8|fusion;YY1AP1-ARHGEF2|7|fusion;YY1AP1-ARHGEF2|16|fusion;YY1AP1-ARHGEF2|15|fusion;YY1AP1-ARHGEF2|4|fusion;YY1AP1-ARHGEF2|3|fusion;YY1AP1-ARHGEF2|6|fusion;YY1AP1-ARHGEF2|5|fusion;YY1AP1-ARHGEF2|12|fusion;YY1AP1-ARHGEF2|11|fusion;YY1AP1-ARHGEF2|10|fusion;YY1AP1-ARHGEF2|9|fusion;ENSG00000116584|ENST00000361247|ARHGEF2;nc|ENSG00000116584|Q92974-2|ARHGEF2;YY1AP1-ARHGEF2|2|fusion	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	chr1:155951086-155951483|116|12.56|0.49|4.68|-|0|None,ARHGEF2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2856323122978	2	500.284734	998.554916	1.0311	0.00051585	0.40511	0.00020267	1.4362	0.00071852	500.28516978945987	67.03	0.43522	68.919	68.704	69.139	1.8889					23	13	2	0	0	0	0.070759	2	28111	28111;28164		59.795	10.126	1	4875000			23548	160	11669	11722	27093;27094	27093					0.05558064168462806
NLYPFVKTV	9	Unmodified	_NLYPFVKTV_					0	0	0		ENST00000427397.5_1_2:216176945-216197107:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.8085815310478	2	540.808042	1079.60153	1.8261	0.00098757	-2.2302	-0.0012061	-0.4041	-0.00021854	541.3076638842964	51.003	0.44234	51.003	50.819	51.261	0					33	13	3	0	0	0	0.20244	3	21301	21249;21301;21352		32.786	12.332	1	1895600			23549	2827	11670	11723	27095;27096;27097	27096					0.06491503999745873
NLYPFVKTV	9	Unmodified	_NLYPFVKTV_					0	0	0		ENST00000427397.5_1_2:216176945-216197107:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.8083984255791	2	540.808042	1079.60153	1.7435	0.00094293	-1.1168	-0.000604	0.6267	0.00033893	541.3087440618607	50.53	0.46799	50.858	50.606	51.074	0.32824					33	14	3	0	0	0	0.075994	3	21156	21109;21156;21208		57.722	32.323	1	1879600			23550	2827	11670	11723	27098;27099;27100	27099					0.06491503999745873
NLYPFVKTV	9	Unmodified	_NLYPFVKTV_					0	0	0		ENST00000427397.5_1_2:216176945-216197107:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.8096191287041	2	540.808042	1079.60153	1.8499	0.0010004	2.4188	0.0013081	4.2686	0.0023085	540.8079946279687	49.233	0.71236	50.624	50.298	51.011	1.3911					62	22	4	0	0	0	0.053939	2	20576	20526;20576		66.457	41.057	1	4501000			23551	2827	11670	11723	27101;27102	27102					0.06491503999745873
NLYPFVKTV	9	Unmodified	_NLYPFVKTV_					0	0	0		ENST00000427397.5_1_2:216176945-216197107:+|nuORF;nc|ENSG00000138363|P31939-2|ATIC;ENSG00000138363|ENST00000236959|ATIC;ENST00000443953.5_1_2:216177073-216214375:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	ENST00000427397.5_1_2:216176945-216197107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.8091918826103	2	540.808042	1079.60153	2.0163	0.0010904	1.3218	0.00071483	3.3381	0.0018052	540.8073154800068	48.686	0.67993	50.663	50.328	51.008	1.9772					63	21	4	0	0	0	0.040497	3	20359	20308;20359;20413		75.761	45.124	1	4925700			23552	2827	11670	11723	27103;27104;27105	27104					0.06491503999745873
NLYQVFINY	9	Unmodified	_NLYQVFINY_					0	0	0		nc|ENSG00000134215|Q9UKW4-2|VAV3;ENST00000343258.8_1_1:108115955-108328118:-|nuORF;ENSG00000134215|ENST00000370056|VAV3;nc|ENSG00000134215|Q9UKW4-4|VAV3	nc|ENSG00000134215|Q9UKW4-2|VAV3	nc|ENSG00000134215|Q9UKW4-2|VAV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.3015014529228	2	587.300581	1172.58661	2.3695	0.0013916	-0.94438	-0.00055463	1.4251	0.00083698	587.3001150694888	59.169	0.35947	60.588	60.409	60.769	1.4196					25	11	3	0	0	0	0.10294	1	24825	24825		48.346	4.4876	1	2594300			23553	2598	11671	11724	27106	27106					0.007220121317459416
NMDPGYDS	8	Unmodified	_NMDPGYDS_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	898.3290893435478	1	898.324724	897.317447	2.8126	0.0025266	2.3979	0.0021541	5.2105	0.0046807	898.3266836800839	107.52	0.13782	107.57	107.5	107.64	0.052452					14	6	3	0	0	0	0.87935	1	46032	46032		9.3474	4.1168	1	15088000			23554	4609	11672	11725	27107	27107					-0.13531869827068022
NMELKLVAH	9	Unmodified	_NMELKLVAH_					0	0	0			REV__ENSG00000077942|ENST00000327858|FBLN1	REV__ENSG00000077942|ENST00000327858|FBLN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	352.1965515017509	3	352.19531	1053.5641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.954	1	74.279	73.779	74.779	0.32494								0	0	0	0.42693	1	30936	30936		0.96228	0.56156	1		+	+	23555	8371	11673	11726	27108	27108					0.03946089462488089
NMLEAVHTI	9	Unmodified	_NMLEAVHTI_					0	0	0		nc|ENSG00000112742|P33981-2|TTK;chr6:80022472-80026381|411|14.54|0.51|4.83|+|ENST00000509894|TTK,TTK;ENSG00000112742|ENST00000369798|TTK	nc|ENSG00000112742|P33981-2|TTK	nc|ENSG00000112742|P33981-2|TTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2661010622978	2	514.265684	1026.51682	2.1567	0.0011091	0.4105	0.0002111	2.5672	0.0013202	514.2651267748963	42.278	0.3203	43.618	43.476	43.796	1.3399					15	9	2	0	0	0	0.076627	1	17707	17707		57.471	21.427	1	1034700			23556	277	11674	11727	27109	27109					0.004618101914957151
NMLEAVHTI	9	Unmodified	_NMLEAVHTI_					0	0	0		nc|ENSG00000112742|P33981-2|TTK;chr6:80022472-80026381|411|14.54|0.51|4.83|+|ENST00000509894|TTK,TTK;ENSG00000112742|ENST00000369798|TTK	nc|ENSG00000112742|P33981-2|TTK	nc|ENSG00000112742|P33981-2|TTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2671996951103	2	514.265684	1026.51682	2.0996	0.0010798	1.0913	0.0005612	3.1909	0.001641	514.2653569750527	41.729	0.29089	43.621	43.476	43.767	1.8927					15	8	3	0	0	0	0.076627	1	17482	17482		57.471	15.377	1	1079200			23557	277	11674	11727	27110	27110					0.004618101914957151
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1997558474541	3	328.200395	981.579357	-2.2947	-0.00075314	1.1973	0.00039295	-1.0975	-0.00036019	328.20074224262424	33.437	0.37298	33.437	33.265	33.638	0					51	11	5	0	0	0	0.88587	1	14064	14064		3.5965	1.9439	1	68728000	+		23558	12909	11675	11728	27111	27111					0.08783001050346684
NMLIKVHK	8	Unmodified	_NMLIKVHK_					0	0	0			REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	REV__ENST00000407925.5_1_2:33534602-33540264:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2005493044853	3	328.200395	981.579357	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.355	1	38.355	37.855	38.855	0								0	0	0	1.0178	1	16077	16077		6.7232	3.1267	1		+		23559	12909	11675	11728	27112	27112					0.08783001050346684
NMLNLAVHL	9	Unmodified	_NMLNLAVHL_					0	0	0		ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7850219607353	2	512.784044	1023.55354	3.0389	0.0015583	-3.977	-0.0020393	-0.9381	-0.00048104	512.7835817262521	62.668	0.31292	64.612	64.469	64.782	1.9444					12	9	2	0	0	0	0.061246	1	26292	26292		63.563	35.076	1	1637800			23560	4733	11676	11729	27113	27113					0.04270106808053242
NMLNLAVHL	9	Unmodified	_NMLNLAVHL_					0	0	0		ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	ENSG00000185085|ENST00000330574|INTS5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	512.784044	1023.55354	3.2323	0.0016574	-8.947	-0.0045879	-5.7148	-0.0029304	513.2810108008597	62.816	0.21111	64.229	64.103	64.314	1.4134	-0.19162	-0.0025041	NaN	63.563	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556250			23561	4733	11676	11729							0.04270106808053242
NMLNRMLIL	9	Unmodified	_NMLNRMLIL_					0	0	0			REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3133422732353	2	559.314654	1116.61476	1.505	0.00084175	-3.8394	-0.0021474	-2.3344	-0.0013057	559.3122266220282	68.334	0.40419	68.656	68.44	68.844	0.32223					26	12	3	0	0	0	0.24063	1	28597	28597		28.487	1.6032	1	855930	+		23562	14573	11677	11730	27114	27114					0.061112955158478144
NMLNRMLIL	9	Unmodified	_NMLNRMLIL_					0	0	0			REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3138915896416	2	559.314654	1116.61476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.471	1	68.794	68.294	69.294	0.32224								0	0	0	0.3792	1	28662	28662		10.824	0	1		+		23563	14573	11677	11730	27115	27115					0.061112955158478144
NMLNRMLIL	9	Unmodified	_NMLNRMLIL_					0	0	0			REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	559.314654	1116.61476	1.846	0.0010325	-3.9107	-0.0021873	-2.0647	-0.0011548	559.312554725895	67.064	0.39908	68.453	68.215	68.614	1.3888	-0.16386	0.00013943	NaN	28.487	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3340600	+		23564	14573	11677	11730							0.061112955158478144
NMLNRMLIL	9	Unmodified	_NMLNRMLIL_					0	0	0			REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	REV__nc|ENSG00000290988|Q8N8C0-2|ZNF781	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	559.314654	1116.61476	1.5262	0.00085363	-3.9862	-0.0022295	-2.46	-0.0013759	559.3127045961911	66.556	0.43694	68.445	68.15	68.587	1.8889	-0.17227	5.4958E-05	NaN	28.487	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2532700	+		23565	14573	11677	11730							0.061112955158478144
NMLPQIFRV	9	Unmodified	_NMLPQIFRV_					0	0	0		ENST00000544258.1_3_12:4598975-4611546:-|nuORF;ENSG00000047621|ENST00000261250|C12orf4	ENST00000544258.1_3_12:4598975-4611546:-|nuORF	ENST00000544258.1_3_12:4598975-4611546:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.3141967654228	2	559.312969	1116.61138	1.1093	0.00062043	-2.0257	-0.001133	-0.91644	-0.00051258	559.3116472217747	68.914	0.34106	68.914	68.737	69.078	0					17	10	2	0	0	0	0.39927	1	28701	28701		20.454	6.5476	1	817780			23566	680	11678	11731	27116	27116					0.05774368733477786
NMLPQIFRV	9	Unmodified	_NMLPQIFRV_					0	0	0		ENST00000544258.1_3_12:4598975-4611546:-|nuORF;ENSG00000047621|ENST00000261250|C12orf4	ENST00000544258.1_3_12:4598975-4611546:-|nuORF	ENST00000544258.1_3_12:4598975-4611546:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	559.3138915896416	2	559.312969	1116.61138	1.505	0.00084175	-0.82606	-0.00046202	0.67891	0.00037972	559.3122266220282	68.334	0.40419	68.656	68.44	68.844	0.32223					26	12	3	0	0	0	0.11568	1	28662	28662		10.824	0	1	855930			23567	680	11678	11731	27117	27117					0.05774368733477786
NMVDIIHSV	9	Unmodified	_NMVDIIHSV_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2673828005791	2	514.265684	1026.51682	2.1393	0.0011002	0.17463	8.9808E-05	2.314	0.00119	514.2653622148794	54.716	0.29202	54.716	54.563	54.855	0					21	8	3	0	0	0	0.018723	2	22813	22765;22813		100.37	64.244	1	1836700			23568	1848	11679	11732	27118;27119	27119					0.004618101914957151
NMVDIIHSV	9	Unmodified	_NMVDIIHSV_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2664672732353	2	514.265684	1026.51682	2.0637	0.0010613	1.0331	0.00053127	3.0968	0.0015926	514.2659987405309	54.078	0.31824	54.399	54.254	54.572	0.32088					21	9	3	0	0	0	0.026628	2	22680	22629;22680		92.822	56.778	1	2112200			23569	1848	11679	11732	27120;27121	27121					0.004618101914957151
NMVDIIHSV	9	Unmodified	_NMVDIIHSV_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2665893435478	2	514.265684	1026.51682	1.0318	0.0005306	2.1411	0.0011011	3.1728	0.0016317	514.2662258325993	52.952	0.41737	54.353	54.121	54.538	1.4005					30	12	3	0	0	0	0.0066739	2	22169	22133;22169		115.69	60.918	1	8838500			23570	1848	11679	11732	27122;27123	27123					0.004618101914957151
NMVDIIHSV	9	Unmodified	_NMVDIIHSV_					0	0	0		ENST00000475214.5_1_3:135974226-136045892:+|nuORF;ENSG00000114054|ENST00000251654|PCCB;nc|ENSG00000114054|P05166-2|PCCB	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	ENST00000475214.5_1_3:135974226-136045892:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2676269412041	2	514.265684	1026.51682	1.5676	0.00080614	0.92952	0.00047802	2.4971	0.0012842	514.2658816280565	52.332	0.40659	54.304	54.138	54.545	1.9722					25	12	3	0	0	0	0.019432	2	21959	21908;21959		99.799	59.842	1	6568300			23571	1848	11679	11732	27124;27125	27125					0.004618101914957151
NMVLDNSLV	9	Unmodified	_NMVLDNSLV_					0	0	0			REV__ENSG00000165140|ENST00000375326|FBP1	REV__ENSG00000165140|ENST00000375326|FBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7580444216728	2	502.757692	1003.50083	0.28799	0.00014479	1.6864	0.00084784	1.9744	0.00099263	502.75816333801436	22.958	0.18708	24.609	24.467	24.655	1.6511					7	5	2	0	0	0	0.42305	1	9595	9595		19.257	0	1	357250	+		23572	10767	11680	11733	27126	27126					-0.0007789604541130757
NMYGKVVTV	9	Unmodified	_NMYGKVVTV_					0	0	0		ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7729675173759	2	505.770603	1009.52665	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.102	1	30.384	29.884	30.884	1.2825								0	0	0	0.3792	1	12205	12205		10.824	2.2306	1				23573	4927	11681	11734	27127	27127					0.022269981968747743
NMYGKVVTV	9	Unmodified	_NMYGKVVTV_					0	0	0		ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7697021365166	2	505.770603	1009.52665	0.71764	0.00036296	-0.79553	-0.00040236	-0.077889	-3.9394E-05	505.77026800692244	28.484	0.2141	30.259	30.122	30.336	1.7754					9	6	2	0	0	0	0.39927	1	11936	11936		20.454	11.86	1	829310			23574	4927	11681	11734	27128	27128					0.022269981968747743
NNCCECCT	8	Unmodified	_NNCCECCT_					0	0	0			REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1200439333916	2	445.118991	888.223429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.68	1	34.979	34.479	35.479	0.29942								0	0	0	1.0178	1	14567	14567		0	0	1		+		23575	11815	11682	11735	27129	27129					-0.22515371516885807
NNCCECCT	8	Unmodified	_NNCCECCT_					0	0	0			REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	MSMS	GG20161007_CRH_Patient100_A02_02	2	445.1198303103447	2	445.118991	888.223429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.894	1	36.196	35.696	36.696	0.30197								0	0	0	1.0178	1	15090	15090		0	0	1		+		23576	11815	11682	11735	27130	27130					-0.22515371516885807
NNCCECCT	8	Unmodified	_NNCCECCT_					0	0	0			REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1201965212822	2	445.118991	888.223429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.255	1	86.852	86.352	87.352	1.5962								0	0	0	1.0178	1	35807	35807		0	0	1		+		23577	11815	11682	11735	27131	27131					-0.22515371516885807
NNCCECCT	8	Unmodified	_NNCCECCT_					0	0	0			REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	REV__nc|ENSG00000205359|Q86UG4-3|SLCO6A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1207153201103	2	445.118991	888.223429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.537	1	87.084	86.584	87.584	1.547								0	0	0	1.0178	1	35961	35961		0	0	1		+		23578	11815	11682	11735	27132	27132					-0.22515371516885807
NNEWCYCFQK	10	Unmodified	_NNEWCYCFQK_					0	0	0		ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	ENSG00000152377|ENST00000394945|SPOCK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1201354861259	3	445.514602	1333.52198	0.087239	3.8866E-05	1.9768	0.00088071	2.0641	0.00091957	445.51696609556046	13.014	0.56791	13.74	13.409	13.977	0.72639					27	17	2	0	0	0	0.12555	1	5354	5354		0.69767	0	1	420720			23579	3323	11683	11736	27133	27133					-0.13144254008216194
NNFSWSLQW	9	Unmodified	_NNFSWSLQW_					0	0	0		nc|ENSG00000291110|Q309B1|TRIM16L;nc|ENSG00000221926|O95361-2|TRIM16;ENSG00000221926|ENST00000649191|TRIM16	nc|ENSG00000291110|Q309B1|TRIM16L	nc|ENSG00000291110|Q309B1|TRIM16L	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5174743533134	3	394.517329	1180.53016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.152	1	28.899	28.399	29.399	1.747								0	0	0	0.42693	1	11363	11363		0.23584	0	1				23580	5274	11684	11737	27134	27134					-0.052886157048988025
NNGDSSMV	8	Unmodified	_NNGDSSMV_					0	0	0		nc|ENSG00000175175|Q8WY54-3|PPM1E;ENSG00000175175|ENST00000308249|PPM1E	nc|ENSG00000175175|Q8WY54-3|PPM1E	nc|ENSG00000175175|Q8WY54-3|PPM1E	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.1675292849541	2	412.166167	822.317782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.893	1	64.893	64.393	65.393	0								0	0	0	1.0178	1	27046	27046		2.5775	1.7838	1				23581	4358	11685	11738	27135	27135					-0.10048450107206008
NNKKKIFHI	9	Unmodified	_NNKKKIFHI_					0	0	0			REV__tr|A0A7D6VSL9|A0A7D6VSL9_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_09805PE=3SV=1	REV__tr|A0A7D6VSL9|A0A7D6VSL9_9CLOTMultidrugexportproteinMepAOS=ClostridiumintestinaleOX=36845GN=HZF06_09805PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.2304870486259	3	381.232864	1140.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.239	1	99.239	98.739	99.739	0								0	0	0	0.42693	1	41531	41531		1.0715	0.10919	1		+		23582	15455	11686	11739	27136	27136					0.11205106250872632
NNKKRKFR	8	Unmodified	_NNKKRKFR_					0	0	0			REV__ENST00000372398.5_1_9:132995575-132995641:+|nuORF	REV__ENST00000372398.5_1_9:132995575-132995641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8340942263603	2	545.833249	1089.65194	1.9974	0.0010903	-0.10135	-5.5322E-05	1.8961	0.0010349	545.8330286702136	83.397	0.83265	83.397	82.984	83.816	0					44	26	2	0	0	0	0.89178	1	34852	34852		0.69038	0	1	1545300	+		23583	12680	11687	11740	27137	27137					0.11070471168113727
NNLELYKRY	9	Unmodified	_NNLELYKRY_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.3088867068291	2	606.822212	1211.62987	1.8478	0.0011213	2.2387	0.0013585	4.0865	0.0024798	606.8259985425732	64.961	0.28107	66.87	66.751	67.032	1.9085					17	8	3	0	0	0	0.11275	1	27217	27217		14.838	3.198	1	1092200	+		23584	13485	11688	11741	27138	27138					0.032522019090492904
NNLILEKAQ	9	Unmodified	_NNLILEKAQ_					0	0	0			REV__tr|A0A7D6VWD6|A0A7D6VWD6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03640PE=4SV=1	REV__tr|A0A7D6VWD6|A0A7D6VWD6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2021667361259	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.993	1	93.161	92.661	93.661	0.16835								0	0	0	0.42693	1	38938	38938		1.1933	0.12188	1		+		23585	15541	11689	11742	27139	27139					0.0627312798899311
NNLQVIYDPV	10	Unmodified	_NNLQVIYDPV_					0	0	0		tr|A0A553SLT8|A0A553SLT8_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_21290PE=4SV=1	tr|A0A553SLT8|A0A553SLT8_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_21290PE=4SV=1	tr|A0A553SLT8|A0A553SLT8_NIACISugarphosphateisomerase/epimeraseOS=NialliacirculansOX=1397GN=CEQ21_21290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8128539919853	2	587.808771	1173.60299	4.2032	0.0024707	2.0323	0.0011946	6.2355	0.0036653	587.8100399851184	93.592	0.286	94.464	94.29	94.576	0.87176					18	8	3	0	0	0	0.65574	1	39424	39424		20.454	5.6154	1	1563800			23586	16355	11690	11743	27140	27140					0.02313093297834712
NNPIIYTVF	9	Unmodified	_NNPIIYTVF_					0	0	0		HTR1D|p.I351N|1|0.05|ENSG00000179546|chr1:23193168-23193168|A/T|missense_variant	HTR1D|p.I351N|1|0.05|ENSG00000179546|chr1:23193168-23193168|A/T|missense_variant	HTR1D|p.I351N|1|0.05|ENSG00000179546|chr1:23193168-23193168|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	540.3334838747978	2	540.78985	1079.56515	2.4566	0.0013285	-0.023276	-1.2587E-05	2.4333	0.0013159	540.7904811887988	69.621	0.25147	70.987	70.876	71.128	1.3657					12	7	2	0	0	0	0.11071	1	29229	29229		6.7232	2.7788	1	1222900			23587	7652	11691	11744	27141	27141					0.028546271030336356
NNPIQKWAK	9	Unmodified	_NNPIQKWAK_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|175|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|175|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|175|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	549.8081542849541	2	549.806365	1097.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.11	1	11.11	10.61	11.61	0								0	0	0	0.40883	1	4588	4588		7.9102	0	1				23588	7754	11692	11745	27142	27142					0.053282539457541134
NNPIVKARY	9	Unmodified	_NNPIVKARY_					0	0	0		nc|ENSG00000162664|Q5BKZ1-3|ZNF326;ENST00000394583.7_1_1:90470639-90493257:+|nuORF;ENSG00000162664|ENST00000340281|ZNF326	nc|ENSG00000162664|Q5BKZ1-3|ZNF326	nc|ENSG00000162664|Q5BKZ1-3|ZNF326	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.8081542849541	2	537.806365	1073.59818	2.6666	0.0014341	0.56692	0.00030489	3.2335	0.001739	537.8064599439957	89.07	0.48217	89.294	89.036	89.519	0.2236					25	14	3	0	0	0	0.83753	1	37327	37327		1.8442	0.19162	1	1246900			23589	3636	11693	11746	27143	27143					0.0643225394574074
NNSAGSGA	8	Unmodified	_NNSAGSGA_					0	0	0		nc|ENSG00000168297|Q7Z7A4-3|PXK;nc|ENSG00000168297|Q7Z7A4-5|PXK;nc|ENSG00000168297|Q7Z7A4-7|PXK;nc|ENSG00000168297|Q7Z7A4-2|PXK;nc|ENSG00000168297|Q7Z7A4-6|PXK;nc|ENSG00000168297|Q7Z7A4-4|PXK;ENSG00000168297|ENST00000356151|PXK	nc|ENSG00000168297|Q7Z7A4-3|PXK	nc|ENSG00000168297|Q7Z7A4-3|PXK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.2856323122978	1	677.284908	676.277631	2.6822	0.0018166	-3.7778	-0.0025586	-1.0956	-0.000742	677.2830787127937	103.9	0.094635	103.96	103.92	104.01	0.059502					7	4	2	0	0	0	0.89181	1	43716	43716		0.6015	0	1	17758000			23590	4029	11694	11747	27144	27144					-0.07345628715484054
NNSLKSLV	8	Unmodified	_NNSLKSLV_					0	0	0			REV__tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	REV__tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	874.4986450076103	1	874.499258	873.491981	3.1543	0.0027584	-4.0372	-0.0035305	-0.88289	-0.00077208	874.4957830109215	103.39	0.068062	103.57	103.53	103.6	0.18066					8	2	4	0	0	0	0.88587	1	43527	43527		5.2307	2.9279	1	129650000	+		23591	15549	11695	11748	27145	27145					0.05017498380414054
NNSLKSLV	8	Unmodified	_NNSLKSLV_					0	0	0			REV__tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	REV__tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	874.499258	873.491981	3.1543	0.0027584	-4.0372	-0.0035305	-0.88289	-0.00077208	874.4957830109215	103.39	0.068062	103.57	103.53	103.6	0.18066	0.04314	-0.0015945	NaN	5.2307	8	2	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129650000	+		23592	15549	11695	11748							0.05017498380414054
NNWLSEDHK	9	Unmodified	_NNWLSEDHK_					0	0	0			REV__tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	REV__tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5117980837822	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.12	1	26.381	25.881	26.881	0.26173								0	0	0	0.33422	1	10912	10912		15.248	0	1		+		23593	14837	11696	11749	27146	27146					-0.04986107572926812
NNWLSEDHK	9	Unmodified	_NNWLSEDHK_					0	0	0			REV__tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	REV__tr|A0A553SI54|A0A553SI54_NIACIYwhDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14165PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5128356814384	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.34064	1	1.0764	0.57642	1.5764	0.73579								0	0	0	0.42693	1	140	140		3.8763	0.27984	1		+		23594	14837	11696	11749	27147	27147					-0.04986107572926812
NNYFNPKNI	9	Unmodified	_NNYFNPKNI_					0	0	0			REV__ENSG00000067334|ENST00000436063|DNTTIP2	REV__ENSG00000067334|ENST00000436063|DNTTIP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.2201415896416	2	562.28018	1122.54581	2.7579	0.0015507	0.69702	0.00039192	3.455	0.0019427	562.2795338970848	75.069	0.246	76.85	76.699	76.945	1.7817					12	7	2	0	0	0	0.11463	1	31513	31513		4.3292	0	1	584720	+		23595	8691	11697	11750	27148	27148					-0.010563291878725067
NPADITVLF	9	Unmodified	_NPADITVLF_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57565995-57566166:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	989.5353271365166	1	989.530224	988.522947	4.4985	0.0044514	0.0044279	4.3815E-06	4.503	0.0044558	989.5315475804243	74.84	0.31348	76.146	75.966	76.28	1.3063					15	9	2	0	0	0	0.031377	1	31404	31404		85.272	41.414	1	1271700			23596	1324	11698	11751	27149	27149					0.02822651694657452
NPADITVLF	9	Unmodified	_NPADITVLF_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57565995-57566166:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2697326540947	2	495.26875	988.522947	2.9304	0.0014513	-0.47402	-0.00023477	2.4564	0.0012166	495.2684106730741	74.397	0.47458	76.193	75.929	76.403	1.7962					30	14	3	0	0	0	0.10473	1	31216	31216		47.749	5.9091	1	1696200			23597	1324	11698	11751	27150	27150					0.02822651694657452
NPADITVLF	9	Unmodified	_NPADITVLF_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57565995-57566166:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	495.26875	988.522947	3.1046	0.0015376	0.16466	8.1553E-05	3.2693	0.0016192	495.2685693381632	74.834	0.40591	76.14	75.905	76.311	1.3063	-0.026467	0.0003144	NaN	47.749	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1559700			23598	1324	11698	11751							0.02822651694657452
NPADITVLF	9	Unmodified	_NPADITVLF_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57565995-57566166:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	989.530224	988.522947	3.4147	0.003379	0.10336	0.00010228	3.5181	0.0034813	989.5305036445963	74.385	0.31777	76.181	76.021	76.339	1.7962	0.01761	3.1673E-05	NaN	85.272	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	819160			23599	1324	11698	11751							0.02822651694657452
NPASINGFL	9	Unmodified	_NPASINGFL_					0	0	0		tr|A0A553SQ57|A0A553SQ57_NIACIYqfQ-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_19115PE=4SV=1	tr|A0A553SQ57|A0A553SQ57_NIACIYqfQ-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_19115PE=4SV=1	tr|A0A553SQ57|A0A553SQ57_NIACIYqfQ-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_19115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.7463561892509	2	466.745442	931.476331	1.3137	0.00061315	1.8505	0.0008637	3.1641	0.0014769	466.74664259912976	38.168	0.31272	39.988	39.818	40.131	1.8202					13	9	2	0	0	0	0.17276	1	16021	16021		36.127	9.2434	1	1495900			23600	16502	11699	11752	27151	27151					0.00785211863387758
NPCCDAHT	8	Unmodified	_NPCCDAHT_					0	0	0		ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	ENSG00000069206|ENST00000175238|ADAM7	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.6561462283134	2	430.654913	859.295272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.617	1	99.689	99.189	100.19	0.072716								0	0	0	1.0178	1	41710	41710		0.69038	0	1				23601	841	11700	11753	27152	27152					-0.14000372776490622
NPDDVFREF	9	Unmodified	_NPDDVFREF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.7643310427666	2	569.76182	1137.50909	1.8653	0.0010628	0.89034	0.00050728	2.7557	0.0015701	569.7624857520676	50.672	0.76513	52.066	51.551	52.316	1.3938					69	24	4	0	0	0	0.00032631	5	21171	21076;21121;21171;21222;21263		136.39	86.459	1	20317000			23602	1553	11701	11754	27153;27154;27155;27156;27157	27155					-0.05416625804423347
NPDDVFREF	9	Unmodified	_NPDDVFREF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.7635375857353	2	569.76182	1137.50909	1.6304	0.00092894	1.1753	0.00066962	2.8057	0.0015986	569.7624612765043	50.125	0.85751	52.102	51.569	52.427	1.9772					72	27	4	0	0	0	3.8363E-05	5	20989	20841;20888;20940;20989;21040		157.8	107.86	1	17798000			23603	1553	11701	11754	27158;27159;27160;27161;27162	27161					-0.05416625804423347
NPDVQGALWQ	10	Unmodified	_NPDVQGALWQ_					0	0	0		ENSG00000221882|ENST00000573901|OR3A2;nc|ENSG00000221882|P47893|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	ENSG00000221882|ENST00000573901|OR3A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.2809936404228	2	564.277638	1126.54072	1.3041	0.00073586	2.5926	0.001463	3.8967	0.0021988	564.2789346211448	40.282	0.29036	40.282	40.106	40.396	0					13	8	2	0	0	0	0.8325	1	16861	16861		8.7454	0.83525	1	579840			23604	5272	11702	11755	27163	27163					-0.01748633050465287
NPELFLYQL	9	Unmodified	_NPELFLYQL_					0	0	0			REV__ENSG00000130725|ENST00000253023|UBE2M	REV__ENSG00000130725|ENST00000253023|UBE2M	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.3072387576103	2	568.802957	1135.59136	1.6036	0.00091211	1.9571	0.0011132	3.5607	0.0020253	568.8042286870517	48.383	0.18366	49.771	49.65	49.833	1.388					8	5	2	0	0	0	0.10591	1	20254	20254		13.906	0.39817	1	875040	+		23605	9795	11703	11756	27164	27164					0.028988962745188473
NPELFSFAAG	10	Unmodified	_NPELFSFAAG_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|233|1|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|233|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7583495974541	2	526.756007	1051.49746	2.1552	0.0011353	3.4676	0.0018266	5.6228	0.0029618	526.7582094775263	68.344	0.56818	70.214	69.858	70.426	1.87					52	17	4	0	0	0	0.74985	1	28651	28651		16.149	0.30192	1	5949800	+		23606	14183	11704	11757	27165	27165					-0.026228228277659582
NPENNVGLITL	11	Unmodified	_NPENNVGLITL_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4	nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000462970.5_1_1:151227258-151237442:+|nuORF	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3200561404228	2	592.319502	1182.62445	2.9363	0.0017392	-0.98658	-0.00058437	1.9497	0.0011548	592.318878792344	61.976	0.34237	63.933	63.719	64.061	1.9571					17	10	2	0	0	0	0.058184	1	25996	25996		64.927	22.832	1	1471200			23607	6817;3524	11705	11758	27166	27166					0.04044478326591161
NPENNVGLITL	11	Unmodified	_NPENNVGLITL_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;ENST00000461434.1_1_1:151227258-151234901:+|nuORF;ENST00000462970.5_1_1:151227258-151237442:+|nuORF;nc|ENSG00000159352|P55036-2|PSMD4;ENSG00000159352|ENST00000368884|PSMD4	nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000462970.5_1_1:151227258-151237442:+|nuORF	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	592.319502	1182.62445	2.9495	0.001747	-1.4091	-0.00083463	1.5404	0.00091242	592.3187647809985	62.572	0.32819	63.985	63.775	64.103	1.4134	0.025802	-0.00026409	NaN	64.927	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1505900			23608	6817;3524	11705	11758							0.04044478326591161
NPEVVPKLNE	10	Unmodified	_NPEVVPKLNE_					0	0	0			REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2	REV__nc|ENSG00000188738|Q5CZC0-2|FSIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8093749880791	2	569.808771	1137.60299	1.2854	0.00073241	-1.3569	-0.00077315	-0.071495	-4.0738E-05	569.8079435789375	26.073	0.37622	27.332	27.172	27.549	1.2594					30	11	4	0	0	0	0.89803	1	10903	10903		1.1933	0	1	1204400	+		23609	11582	11706	11759	27167	27167					0.03969093297860127
NPIDTMFHL	9	Unmodified	_NPIDTMFHL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2;ENST00000480329.5_1_20:44979343-44983832:-|nuORF	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	544.8279907107353	2	544.265684	1086.51682	1.7577	0.00095668	2.2438	0.0012212	4.0016	0.0021779	544.2679901148298	67.344	0.3393	68.722	68.575	68.914	1.3778					16	10	2	0	0	0	0.060741	1	28253	28253		26.884	16.06	1	741690			23610	998	11707	11760	27168	27168					-0.022981898084935892
NPIGSLQEL	9	Unmodified	_NPIGSLQEL_					0	0	0		nc|ENSG00000180228|O75569-3|PRKRA;nc|ENSG00000180228|O75569-2|PRKRA;ENSG00000180228|ENST00000325748|PRKRA	nc|ENSG00000180228|O75569-3|PRKRA	nc|ENSG00000180228|O75569-3|PRKRA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7645141482353	2	485.763832	969.513111	1.1539	0.00056051	0.74813	0.00036342	1.902	0.00092393	485.76417881208556	52.121	0.33587	53.517	53.346	53.682	1.3966					18	10	2	0	0	0	0.026836	3	21850	21776;21798;21850		92.491	28.255	1	1607300			23611	4541	11708	11761	27169;27170;27171	27171					0.027134636892810704
NPIGSLQEL	9	Unmodified	_NPIGSLQEL_					0	0	0		nc|ENSG00000180228|O75569-3|PRKRA;nc|ENSG00000180228|O75569-2|PRKRA;ENSG00000180228|ENST00000325748|PRKRA	nc|ENSG00000180228|O75569-3|PRKRA	nc|ENSG00000180228|O75569-3|PRKRA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7643310427666	2	485.763832	969.513111	0.58152	0.00028248	0.015788	7.669E-06	0.59731	0.00029015	485.7640555004542	51.508	0.31268	53.484	53.398	53.711	1.9753					15	9	2	0	0	0	0.031377	2	21601	21601;21655		85.272	8.628	1	1761400			23612	4541	11708	11761	27172;27173	27172					0.027134636892810704
NPINLKMQD	9	Unmodified	_NPINLKMQD_					0	0	0		ENST00000257287.4_1_4:56819306-56819372:+|nuORF	ENST00000257287.4_1_4:56819306-56819372:+|nuORF	ENST00000257287.4_1_4:56819306-56819372:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.3220703005791	2	536.776416	1071.53828	2.676	0.0014364	1.4027	0.00075295	4.0787	0.0021894	536.776311495403	50.002	0.25328	51.393	51.229	51.482	1.3911					13	7	3	0	0	0	0.078322	1	20884	20884		34.102	5.6156	1	1726000			23613	5602	11709	11762	27174	27174					0.00537195220204012
NPISTVTEL	9	Unmodified	_NPISTVTEL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2647582888603	2	487.263665	972.512776	2.0118	0.00098025	-1.1221	-0.00054675	0.88967	0.00043351	487.2631792727019	49.42	0.43188	50.811	50.516	50.948	1.3911					24	13	2	0	0	0	0.063746	2	20695	20647;20695		62.573	24.599	1	3610300			23614	1923	11710	11763	27175;27176	27176					0.025420439694244124
NPISTVTEL	9	Unmodified	_NPISTVTEL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2634155154228	2	487.263665	972.512776	1.8594	0.00090603	-1.6521	-0.00080502	0.20729	0.00010101	487.2629944318851	48.842	0.40184	50.819	50.576	50.978	1.9772					21	12	2	0	0	0	0.17276	1	20438	20438		36.127	12.106	1	1989400			23615	1923	11710	11763	27177	27177					0.025420439694244124
NPISTVTEL	9	Unmodified	_NPISTVTEL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	973.5235473513603	1	973.520053	972.512776	1.6103	0.0015676	0.96444	0.00093891	2.5747	0.0025065	973.5212288987367	48.894	0.4011	50.871	50.607	51.008	1.9772					18	12	2	0	0	0	0.049839	1	20491	20491		68.081	25.986	1	796550			23616	1923	11710	11763	27178	27178					0.025420439694244124
NPISTVTEL	9	Unmodified	_NPISTVTEL_					0	0	0		nc|ENSG00000115484|P50991-2|CCT4;ENSG00000115484|ENST00000394440|CCT4	nc|ENSG00000115484|P50991-2|CCT4	nc|ENSG00000115484|P50991-2|CCT4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	973.520053	972.512776	1.78	0.0017329	0.43389	0.0004224	2.2139	0.0021553	973.5200291260887	49.359	0.40005	50.75	50.58	50.98	1.3911	-0.060306	-0.00012706	NaN	68.081	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	842870			23617	1923	11710	11763							0.025420439694244124
NPITGDMQL	9	Unmodified	_NPITGDMQL_					0	0	0		ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7437927126884	2	494.742042	987.469531	2.4165	0.0011955	-0.84639	-0.00041874	1.5701	0.0007768	494.7416337382056	49.902	0.47087	51.293	50.98	51.451	1.3911					21	14	2	0	0	0	0.10473	1	20868	20868		47.749	28.492	1	1331900			23618	1809	11711	11764	27179	27179					-0.02470469079491977
NPITGDMQL	9	Unmodified	_NPITGDMQL_					0	0	0		ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	ENSG00000113205|ENST00000231130|PCDHB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7418090701103	2	494.742042	987.469531	1.7633	0.00087236	-0.22999	-0.00011378	1.5333	0.00075857	494.7415927672023	49.352	0.4378	51.33	51.068	51.506	1.9772					21	13	2	0	0	0	0.063746	2	20694	20643;20694		62.573	35.689	1	1076600			23619	1809	11711	11764	27180;27181	27181					-0.02470469079491977
NPKAARAV	8	Unmodified	_NPKAARAV_					0	0	0		ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	ENSG00000170430|ENST00000651593|MGMT	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	413.2476074099541	2	413.748319	825.482085	2.9659	0.0012271	-3.1965	-0.0013226	-0.23064	-9.5429E-05	413.74701160176244	104.51	0.19079	104.57	104.48	104.67	0.056801					12	9	2	0	0	0	2.3239	1	44089	44089		2.5775	1.976	1	12399000			23620	4145	11712	11765	27182	27182					0.06236355165697205
NPKALLCIF	9	Unmodified	_NPKALLCIF_					0	0	0			REV__nc|ENSG00000073711|Q06190-3|PPP2R3A	REV__nc|ENSG00000073711|Q06190-3|PPP2R3A	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1970397830009	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.104	1	21.104	20.604	21.604	0								0	0	0	0.42693	1	8774	8774		1.0715	0	1		+		23621	8745	11713	11766	27183	27183					0.060041789561978476
NPKALLCIF	9	Unmodified	_NPKALLCIF_					0	0	0			REV__nc|ENSG00000073711|Q06190-3|PPP2R3A	REV__nc|ENSG00000073711|Q06190-3|PPP2R3A	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1974670290947	3	340.196651	1017.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.05	1	21.261	20.761	21.761	0.21024								0	0	0	0.42693	1	8744	8744		1.0715	0	1		+		23622	8745	11713	11766	27184	27184					0.060041789561978476
NPKPIKAIMNL	11	Unmodified	_NPKPIKAIMNL_					0	0	0		ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	ENSG00000011260|ENST00000225298|UTP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8709594607353	2	619.868108	1237.72166	1.4221	0.00088151	2.9559	0.0018323	4.378	0.0027138	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	0.97491	1	32933	32933		5.2969	0.39987	1	7012900			23623	565	11714	11767	27185	27185					0.11231169001871422
NPLEETSAL	9	Unmodified	_NPLEETSAL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	973.4843627810478	1	973.483667	972.476391	1.4723	0.0014333	-1.0709	-0.0010425	0.40142	0.00039078	973.4829910967459	38.462	0.2935	39.758	39.625	39.919	1.2961					13	9	2	0	0	0	0.010279	1	16146	16146		107.19	39.106	1	1663700			23624	4424	11715	11768	27186	27186					-0.010948329272878254
NPLEETSAL	9	Unmodified	_NPLEETSAL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2459899783134	2	487.245472	972.476391	1.7501	0.00085273	-0.10526	-5.1286E-05	1.6449	0.00080145	487.24530409898165	38.548	0.292	39.844	39.651	39.943	1.2961					20	9	3	0	0	0	0.53525	1	16208	16208		13.906	3.0821	1	1843100			23625	4424	11715	11768	27187	27187					-0.010948329272878254
NPLEETSAL	9	Unmodified	_NPLEETSAL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	973.4858276247978	1	973.483667	972.476391	0.62403	0.00060748	1.1429	0.0011126	1.7669	0.00172	973.4849930174901	37.889	0.29954	39.71	39.579	39.879	1.8202					13	9	2	0	0	0	0.024001	1	15905	15905		96.111	37.432	1	1104700			23626	4424	11715	11768	27188	27188					-0.010948329272878254
NPLEETSAL	9	Unmodified	_NPLEETSAL_					0	0	0		ENST00000457750.1_1_3:195341833-195346985:+|nuORF;nc|ENSG00000176945|Q8N307-3|MUC20;ENSG00000176945|ENST00000447234|MUC20	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	ENST00000457750.1_1_3:195341833-195346985:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2450439333916	2	487.245472	972.476391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.002	1	39.822	39.322	40.322	1.8202								0	0	0	0.091705	1	15942	15942		36.127	12.106	1				23627	4424	11715	11768	27189	27189					-0.010948329272878254
NPLYPNLSI	9	Unmodified	_NPLYPNLSI_					0	0	0		ENST00000559040.1_1_15:49448112-49518881:+|nuORF	ENST00000559040.1_1_15:49448112-49518881:+|nuORF	ENST00000559040.1_1_15:49448112-49518881:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.3177368044853	2	515.782025	1029.5495	2.2243	0.0011472	1.1312	0.00058344	3.3554	0.0017307	515.7833981917205	48.592	0.27819	50.569	50.483	50.761	1.9772					10	8	2	0	0	0	0.059719	1	20358	20358		36.127	15.712	1	455480			23628	7319	11716	11769	27190	27190					0.035903405860153725
NPNVFSTD	8	Unmodified	_NPNVFSTD_					0	0	0			REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	893.4032470583916	1	893.399938	892.392661	2.8101	0.0025105	0.99195	0.00088621	3.802	0.0033967	893.4013400008571	104.84	0.075897	104.9	104.85	104.93	0.056801					8	3	3	0	0	0	0.88587	1	44312	44312		5.2307	0	1	28310000	+		23629	14647	11717	11770	27191	27191					-0.057839443043235406
NPNVFSTD	8	Unmodified	_NPNVFSTD_					0	0	0			REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	893.399938	892.392661	2.8101	0.0025105	0.99195	0.00088621	3.802	0.0033967	893.4013400008571	104.84	0.075897	104.9	104.85	104.93	0.056801	-0.023162	0.0003346	NaN	5.2307	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28310000	+		23630	14647	11717	11770							-0.057839443043235406
NPNVFSTD	8	Unmodified	_NPNVFSTD_					0	0	0			REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	REV__sp|P69338|UL132_HCMVAEnvelopeglycoproteinUL132OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL132PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	893.399938	892.392661	2.9399	0.0026265	0.5836	0.00052138	3.5234	0.0031478	893.4010086050366	104.8	0.09201	104.96	104.92	105.01	0.16055	0.044374	-3.0221E-05	NaN	5.2307	15	4	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	219180000	+		23631	14647	11717	11770							-0.057839443043235406
NPPLLLLIV	9	Unmodified	_NPPLLLLIV_					0	0	0			REV__ENST00000303115.7_1_5:35877562-35877619:+|nuORF	REV__ENST00000303115.7_1_5:35877562-35877619:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.2230712771416	3	331.223194	990.647754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.548	1	22.548	22.048	23.048	0								0	0	0	0.42693	1	9383	9383		0.26902	0	1		+		23632	12325	11718	11771	27192	27192					0.15205568901865263
NPPPRSSG	8	Unmodified	_NPPPRSSG_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;PAPOLA-BTF3|1|fusion	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2078735232353	2	406.206484	810.398415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.183	1	92.549	92.049	93.049	1.366								0	0	0	1.0178	1	38395	38395		2.0598	0.21551	1				23633	1133	11719	11772	27193	27193					-0.014368010020007205
NPQFLDPVL	9	Unmodified	_NPQFLDPVL_					0	0	0		nc|ENSG00000064419|Q9Y5L0-3|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7836791872978	2	521.782025	1041.5495	2.8201	0.0014715	-4.1206	-0.00215	-1.3005	-0.00067856	521.78201870271	69.903	0.72113	71.257	70.927	71.648	1.3536					55	22	3	0	0	0	0.031377	2	29330	29330;29383		85.272	40.865	1	14766000			23634	772	11720	11773	27194;27195	27194					0.030383405859765844
NPQFLDPVL	9	Unmodified	_NPQFLDPVL_					0	0	0		nc|ENSG00000064419|Q9Y5L0-3|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7832519412041	2	521.782025	1041.5495	2.0608	0.0010753	-3.5958	-0.0018762	-1.535	-0.00080092	521.7822010188023	69.407	0.69167	71.26	70.948	71.639	1.853					53	21	3	0	0	0	0.031377	3	29133	29093;29133;29174		85.272	45.033	1	12116000			23635	772	11720	11773	27196;27197;27198	27197					0.030383405859765844
NPQFLGTALV	10	Unmodified	_NPQFLGTALV_					0	0	0		nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-5|TNPO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2969238162041	2	530.295299	1058.57605	2.7315	0.0014485	-3.5199	-0.0018666	-0.78838	-0.00041807	530.2950033443691	69.903	0.62675	71.257	70.957	71.584	1.3536					48	19	3	0	0	0	0.6819	1	29344	29344		19.257	3.4098	1	6350800			23636	7828	11721	11774	27199	27199					0.04910029477309763
NPQFLGTALV	10	Unmodified	_NPQFLGTALV_					0	0	0		nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-5|TNPO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2960693240166	2	530.295299	1058.57605	2.3474	0.0012448	-3.5168	-0.0018649	-1.1693	-0.0006201	530.2950297125499	69.429	0.59795	71.282	70.948	71.546	1.853					47	18	3	0	0	0	0.77604	1	29108	29108		14.838	0.93222	1	4563400			23637	7828	11721	11774	27200	27200					0.04910029477309763
NPVAGLVVG	9	Unmodified	_NPVAGLVVG_					0	0	0		nc|ENSG00000131183|Q06495-2|SLC34A1;ENSG00000131183|ENST00000324417|SLC34A1	nc|ENSG00000131183|Q06495-2|SLC34A1	nc|ENSG00000131183|Q06495-2|SLC34A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	825.4830200076103	1	825.482879	824.475603	1.1434	0.00094385	-0.68883	-0.00056862	0.45456	0.00037523	825.4816020464059	53.893	0.28164	55.862	55.784	56.066	1.9697					10	8	2	0	0	0	0.19075	1	22602	22602		34.102	0	1	760080			23638	2481	11722	11775	27201	27201					0.05634417214332643
NPVDIVSTL	9	Unmodified	_NPVDIVSTL_					0	0	0		ENST00000503635.1_1_17:47903366-47904308:+|nuORF;ENST00000513980.5_1_17:47892935-47904861:+|nuORF;ENST00000512616.5_1_17:47892935-47904861:+|nuORF;nc|ENSG00000136504|O95251-3|KAT7;nc|ENSG00000136504|O95251-5|KAT7;nc|ENSG00000136504|O95251-2|KAT7;nc|ENSG00000136504|O95251-4|KAT7;ENSG00000136504|ENST00000259021|KAT7	ENST00000503635.1_1_17:47903366-47904308:+|nuORF	ENST00000503635.1_1_17:47903366-47904308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	957.5314208865166	1	957.525138	956.517862	2.3604	0.0022602	-0.21587	-0.0002067	2.1446	0.0020535	957.5266647526371	60.495	0.4024	61.915	61.718	62.121	1.4196					27	12	3	0	0	0	0.031377	2	25371	25371;25419		85.272	30.498	1	1473900			23639	2727	11723	11776	27202;27203	27202					0.03786347832055981
NPVDIVSTL	9	Unmodified	_NPVDIVSTL_					0	0	0		ENST00000503635.1_1_17:47903366-47904308:+|nuORF;ENST00000513980.5_1_17:47892935-47904861:+|nuORF;ENST00000512616.5_1_17:47892935-47904861:+|nuORF;nc|ENSG00000136504|O95251-3|KAT7;nc|ENSG00000136504|O95251-5|KAT7;nc|ENSG00000136504|O95251-2|KAT7;nc|ENSG00000136504|O95251-4|KAT7;ENSG00000136504|ENST00000259021|KAT7	ENST00000503635.1_1_17:47903366-47904308:+|nuORF	ENST00000503635.1_1_17:47903366-47904308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	957.5298339724541	1	957.525138	956.517862	3.2555	0.0031173	-0.73878	-0.0007074	2.5168	0.0024099	957.5254460112276	60.06	0.31368	62.026	61.854	62.167	1.9653					17	9	2	0	0	0	0.026836	1	25209	25209		92.491	21.358	1	1399100			23640	2727	11723	11776	27204	27204					0.03786347832055981
NPVWIIMEL	9	Unmodified	_NPVWIIMEL_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2;nc|ENSG00000169398|Q05397-2|PTK2;ENST00000519899.5_1_8:141756852-141774450:-|nuORF	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8027221560478	2	557.801903	1113.58925	3.7188	0.0020744	-4.1196	-0.0022979	-0.40075	-0.00022354	557.7999551231464	97.425	0.12636	97.71	97.646	97.772	0.28442					11	4	3	0	0	0	0.023786	1	40992	40992		96.285	46.352	1	8843700			23641	4088	11724	11777	27205	27205					0.03700144265076233
NPVWIIMEL	9	Unmodified	_NPVWIIMEL_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2;nc|ENSG00000169398|Q05397-4|PTK2;nc|ENSG00000169398|Q05397-3|PTK2;nc|ENSG00000169398|Q05397-2|PTK2;ENST00000519899.5_1_8:141756852-141774450:-|nuORF	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8012573122978	2	557.801903	1113.58925	3.2131	0.0017923	-2.4013	-0.0013394	0.81184	0.00045285	557.8010028658525	97.334	0.11041	97.64	97.574	97.685	0.3062					8	3	3	0	0	0	0.023786	1	40938	40938		96.285	46.352	1	8014000			23642	4088	11724	11777	27206	27206					0.03700144265076233
NPYHITWMSK	10	Unmodified	_NPYHITWMSK_					0	0	0			REV__tr|A0A553SFA5|A0A553SFA5_NIACIArabinogalactanendo-beta-1,4-galactanaseOS=NialliacirculansOX=1397GN=CEQ21_08370PE=3SV=1	REV__tr|A0A553SFA5|A0A553SFA5_NIACIArabinogalactanendo-beta-1,4-galactanaseOS=NialliacirculansOX=1397GN=CEQ21_08370PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	638.8089477419853	2	638.81079	1275.60703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.815	1	11.904	11.404	12.404	0.089381								0	0	0	0.65836	1	4903	4903		6.7232	0	1		+		23643	14698	11725	11778	27207	27207					-0.019751404800899763
NPYTLYTF	8	Unmodified	_NPYTLYTF_					0	0	0		ENST00000503088.1_1_5:38490841-38530749:-|nuORF;ENSG00000113594|ENST00000453190|LIFR	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1018.482348620892	1	1018.48802	1017.48075	0.57232	0.0005829	0.40609	0.0004136	0.97841	0.0009965	1018.4874503911352	58.558	0.44505	59.976	59.784	60.229	1.4181					20	13	2	0	0	0	0.7006	1	24539	24539		30.225	0	1	1453200			23644	1831	11726	11779	27208	27208					-0.02729323713708709
NPYTLYTF	8	Unmodified	_NPYTLYTF_					0	0	0		ENST00000503088.1_1_5:38490841-38530749:-|nuORF;ENSG00000113594|ENST00000453190|LIFR	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	ENST00000503088.1_1_5:38490841-38530749:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1018.48802	1017.48075	0.90355	0.00092025	-1.568	-0.001597	-0.66448	-0.00067676	1018.4865259337796	58.009	0.3773	59.978	59.901	60.279	1.969	0.00092211	-0.0011736	NaN	30.225	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1189600			23645	1831	11726	11779							-0.02729323713708709
NQAKLLLIRPN	11	Unmodified	_NQAKLLLIRPN_					0	0	0			REV__ENST00000304677.2_1_14:21249334-21249412:+|nuORF	REV__ENST00000304677.2_1_14:21249334-21249412:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7015258669853	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	0.97491	1	17858	17858		2.4348	0.18206	1	296590000	+		23646	12332	11727	11780	27209	27209					0.1489671851386447
NQCCHDEC	8	Unmodified	_NQCCHDEC_					0	0	0		nc|ENSG00000065361|P21860-4|ERBB3;ENSG00000065361|ENST00000267101|ERBB3;nc|ENSG00000065361|P21860-3|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	317.1974365115166	3	317.7633	950.268071	1.097	0.0003486	1.0246	0.00032559	2.1217	0.00067419	317.7636669863836	42.124	0.95938	42.445	42.133	43.093	0.32058					47	31	2	0	0	0	2.3239	1	17838	17838		0.45834	0.45834	1	950340			23647	786	11728	11781	27210	27210					-0.20905224379180254
NQCPFEDEEC	10	Unmodified	_NQCPFEDEEC_					0	0	0			REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	607.2095214724541	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.98	1	111.03	110.53	111.53	0.047043								0	0	0	0.6624	1	47862	47862		0.40072	0.40072	1		+		23648	9910	11729	11782	27211	27211					-0.19136822649693386
NQFNSFISV	9	Unmodified	_NQFNSFISV_					0	0	0		ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.2629272341728	2	528.261456	1054.50836	2.0529	0.0010845	0.97918	0.00051726	3.0321	0.0016017	528.2619110693184	63.928	0.3185	64.257	64.115	64.434	0.32899					18	9	3	0	0	0	0.13873	1	26805	26805		39.957	19.504	1	976290			23649	2701	11730	11783	27212	27212					-0.016714204534764576
NQFNSFISV	9	Unmodified	_NQFNSFISV_					0	0	0		ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.2631103396416	2	528.261456	1054.50836	2.9393	0.0015527	-0.028454	-1.5031E-05	2.9108	0.0015377	528.2612151948808	62.791	0.38843	64.204	63.987	64.376	1.4134					32	12	3	0	0	0	0.045797	2	26372	26317;26372		71.134	38.828	1	4044200			23650	2701	11730	11783	27213;27214	27214					-0.016714204534764576
NQFNSFISV	9	Unmodified	_NQFNSFISV_					0	0	0		ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2613403201103	2	528.261456	1054.50836	3.2914	0.0017387	-1.5734	-0.00083119	1.718	0.00090753	528.2602389820004	62.223	0.38999	64.18	63.968	64.358	1.9571					32	12	3	0	0	0	0.033794	2	26094	26094;26148		81.613	49.308	1	4363400			23651	2701	11730	11783	27215;27216	27215					-0.016714204534764576
NQFNSFISV	9	Unmodified	_NQFNSFISV_					0	0	0		ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	ENSG00000136021|ENST00000360820|SCYL2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	528.261456	1054.50836	2.0257	0.0010701	-0.35232	-0.00018612	1.6734	0.000884	528.2611352268956	64.368	0.28931	64.368	64.238	64.527	0	0.11548	-3.7082E-05	NaN	81.613	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	756620			23652	2701	11730	11783							-0.016714204534764576
NQFPGFKEV	9	Unmodified	_NQFPGFKEV_					0	0	0		ENST00000407763.2_1_6:149433147-149433330:-|nuORF;ENSG00000125870|ENST00000246071|SNRPB2;ENSG00000077312|ENST00000243563|SNRPA	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1920043826103	2	533.271824	1064.5291	1.714	0.00091404	-0.53926	-0.00028757	1.1748	0.00062647	533.2711428641412	39.131	0.54977	39.44	39.213	39.763	0.30857					35	17	3	0	0	0	0.11071	1	16481	16481		10.824	0	1	1437900			23653	960	11731	11784	27217	27217					-0.0005883007379452465
NQFPGFKEV	9	Unmodified	_NQFPGFKEV_					0	0	0		ENST00000407763.2_1_6:149433147-149433330:-|nuORF;ENSG00000125870|ENST00000246071|SNRPB2;ENSG00000077312|ENST00000243563|SNRPA	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2718994021416	2	533.271824	1064.5291	1.121	0.00059781	0.039908	2.1282E-05	1.1609	0.00061909	533.271794420468	37.796	0.47336	39.08	38.864	39.337	1.284					41	16	3	0	0	0	0.099302	2	15850	15850;15890		49.554	18.918	1	3731300			23654	960	11731	11784	27218;27219	27218					-0.0005883007379452465
NQFPGFKEV	9	Unmodified	_NQFPGFKEV_					0	0	0		ENST00000407763.2_1_6:149433147-149433330:-|nuORF;ENSG00000125870|ENST00000246071|SNRPB2;ENSG00000077312|ENST00000243563|SNRPA	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	ENST00000407763.2_1_6:149433147-149433330:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2723266482353	2	533.271824	1064.5291	1.0015	0.00053409	0.21012	0.00011205	1.2117	0.00064614	533.2717432129594	37.136	0.56795	38.956	38.74	39.308	1.8202					52	23	3	0	0	0	0.099302	2	15608	15568;15608		49.554	24.155	1	5625200			23655	960	11731	11784	27220;27221	27221					-0.0005883007379452465
NQHEHLLEEII	11	Unmodified	_NQHEHLLEEII_					0	0	0			REV__tr|A0A7D7A258|A0A7D7A258_9CLOTFructose-1,6-bisphosphataseclass3OS=ClostridiumintestinaleOX=36845GN=fbpPE=3SV=1	REV__tr|A0A7D7A258|A0A7D7A258_9CLOTFructose-1,6-bisphosphataseclass3OS=ClostridiumintestinaleOX=36845GN=fbpPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	687.8512451052666	2	687.854241	1373.69393	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.74	1	57.15	56.65	57.65	1.4099								0	0	0	0.63769	1	23355	23355		13.042	2.243	1		+		23656	15843	11732	11785	27222	27222					0.02202937275342265
NQIKVKTK	8	Unmodified	_NQIKVKTK_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2045165896416	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.314	1	53.29	52.79	53.79	1.9753								0	0	0	1.0178	1	21505	21505		0.45834	0	1				23657	1422	11733	11786	27223	27223					0.1166203957683365
NQIPFIIQY	9	Unmodified	_NQIPFIIQY_					0	0	0		MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant;ENST00000398632.3_1_21:42775383-42780157:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF;ENSG00000183486|ENST00000330714|MX2	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.3127929568291	2	568.310949	1134.60735	2.6413	0.0015011	0.014607	8.3012E-06	2.6559	0.0015094	568.3109150009911	76.766	0.6622	78.06	77.792	78.455	1.2938					71	20	5	0	0	0	0.0075027	4	32201	32157;32201;32240;32280		112.59	74.423	1	43581000			23658	4654	11734	11787	27224;27225;27226;27227	27225					0.045426025114238655
NQIPFIIQY	9	Unmodified	_NQIPFIIQY_					0	0	0		MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant;ENST00000398632.3_1_21:42775383-42780157:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF;ENSG00000183486|ENST00000330714|MX2	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1135.619067370892	1	1135.61462	1134.60735	2.2122	0.0025123	0.31601	0.00035887	2.5283	0.0028711	1135.6147120387022	76.736	0.31139	78.03	77.887	78.199	1.2938					15	9	2	0	0	0	0.0066739	1	32220	32220		115.69	54.335	1	3123600			23659	4654	11734	11787	27228	27228					0.045426025114238655
NQIPFIIQY	9	Unmodified	_NQIPFIIQY_					0	0	0		MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant;ENST00000398632.3_1_21:42775383-42780157:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF;ENSG00000183486|ENST00000330714|MX2	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3123046755791	2	568.310949	1134.60735	2.7828	0.0015815	-0.45157	-0.00025663	2.3312	0.0013248	568.3107137221415	76.253	0.50438	78.02	77.751	78.255	1.7672					56	15	5	0	0	0	0.0075027	4	31979	31932;31979;32018;32057		112.59	51.236	1	36108000			23660	4654	11734	11787	27229;27230;27231;27232	27230					0.045426025114238655
NQIPFIIQY	9	Unmodified	_NQIPFIIQY_					0	0	0		MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant;ENST00000398632.3_1_21:42775383-42780157:+|nuORF;ENST00000482953.5_1_21:42762449-42780157:+|nuORF;ENSG00000183486|ENST00000330714|MX2	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MX2|p.F652S|1|0.11|ENSG00000183486|chr21:41408040-41408040|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1135.613818347454	1	1135.61462	1134.60735	2.5887	0.0029397	1.2768	0.00145	3.8655	0.0043897	1135.6155451395741	76.313	0.25047	78.08	77.909	78.159	1.7672					14	7	3	0	0	0	0.0092758	1	32001	32001		108	50.526	1	2062800			23661	4654	11734	11787	27233	27233					0.045426025114238655
NQIRWNRGN	9	Unmodified	_NQIRWNRGN_					0	0	0		ENSG00000105767|ENST00000222374|CADM4	ENSG00000105767|ENST00000222374|CADM4	ENSG00000105767|ENST00000222374|CADM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3015624880791	2	579.29977	1156.58499	2.728	0.0015803	3.5517	0.0020575	6.2798	0.0036379	579.3017068564793	76.313	0.37779	78.08	77.845	78.222	1.7672					30	11	3	0	0	0	0.19075	1	31962	31962		34.102	1.797	1	4876400			23662	1541	11735	11788	27234	27234					0.0129581588637393
NQKRRLPRR	9	Unmodified	_NQKRRLPRR_					0	0	0		ENST00000582588.1_1_18:47015724-47015769:-|nuORF;ENST00000332968.11_3_18:47010137-47015769:-|nuORF	ENST00000582588.1_1_18:47015724-47015769:-|nuORF	ENST00000582588.1_1_18:47015724-47015769:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	307.1154357790947	4	306.694353	1222.7483	-2.6491	-0.00081247	-0.80676	-0.00024743	-3.4559	-0.0010599	306.6946296127024	32.089	0.71964	32.089	31.66	32.38	0					52	22	3	0	0	0	0.11954	1	13425	13425		0	0	1	633420			23663	5898	11736	11789	27235	27235					0.14584038728048654
NQKRRLPRR	9	Unmodified	_NQKRRLPRR_					0	0	0		ENST00000582588.1_1_18:47015724-47015769:-|nuORF;ENST00000332968.11_3_18:47010137-47015769:-|nuORF	ENST00000582588.1_1_18:47015724-47015769:-|nuORF	ENST00000582588.1_1_18:47015724-47015769:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	307.1159240603447	4	306.694353	1222.7483	-0.43956	-0.00013481	-0.68489	-0.00021005	-1.1244	-0.00034486	306.6944377475829	30.211	0.83089	31.494	31.134	31.965	1.2825					52	26	3	0	0	0	0.11954	1	12770	12770		0	0	1	884010			23664	5898	11736	11789	27236	27236					0.14584038728048654
NQLETQFFF	9	Unmodified	_NQLETQFFF_					0	0	0			REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.2865478396416	2	587.282389	1172.55022	2.5978	0.0015256	3.1408	0.0018445	5.7386	0.0033702	587.2842733086396	76.762	0.31139	78.056	77.887	78.199	1.2938					23	9	3	0	0	0	0.53525	1	32250	32250		13.906	3.0821	1	1748500	+		23665	9091	11737	11790	27237	27237					-0.029148647649662962
NQLETQFFF	9	Unmodified	_NQLETQFFF_					0	0	0			REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.2858764529228	2	587.282389	1172.55022	2.7404	0.0016094	3.2175	0.0018896	5.9579	0.003499	587.2842693280044	76.253	0.40913	78.02	77.813	78.222	1.7672					27	12	3	0	0	0	0.42305	1	32009	32009		19.257	2.3147	1	2136100	+		23666	9091	11737	11790	27238	27238					-0.029148647649662962
NQLETQFFF	9	Unmodified	_NQLETQFFF_					0	0	0			REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	587.282389	1172.55022	2.5978	0.0015256	3.1408	0.0018445	5.7386	0.0033702	587.2842733086396	76.762	0.31139	78.056	77.887	78.199	1.2938	0.018277	-3.2173E-05	NaN	19.257	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1748500	+		23667	9091	11737	11790							-0.029148647649662962
NQLETQFFF	9	Unmodified	_NQLETQFFF_					0	0	0			REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	REV__ENST00000399425.6_1_18:22642678-22804023:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	587.282389	1172.55022	2.7404	0.0016094	3.2175	0.0018896	5.9579	0.003499	587.2842693280044	76.253	0.40913	78.02	77.813	78.222	1.7672	-0.018277	5.7916E-05	NaN	19.257	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2136100	+		23668	9091	11737	11790							-0.029148647649662962
NQLFYSTI	8	Unmodified	_NQLFYSTI_					0	0	0		tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	492.7824279665947	2	493.2531	984.491647	3.0605	0.0015096	-1.7604	-0.00086833	1.3001	0.00064126	493.2524805241963	65.075	0.50127	66.474	66.316	66.817	1.3989					32	15	3	0	0	0	2.3239	1	27339	27339		32.117	9.6643	1	3436500			23669	16170	11738	11791	27239	27239					-0.0012192133942789951
NQLFYSTI	8	Unmodified	_NQLFYSTI_					0	0	0		tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	tr|A0A553SHU9|A0A553SHU9_NIACI5-methyltetrahydropteroyltriglutamate--homocysteineS-methyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_13650PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	492.7827331423759	2	493.2531	984.491647	2.0703	0.0010212	-0.73374	-0.00036192	1.3365	0.00065924	493.25314963053233	64.671	0.60078	66.599	66.356	66.957	1.928					32	18	3	0	0	0	2.3239	1	27080	27080		44.407	17.523	1	5221000			23670	16170	11738	11791	27240	27240					-0.0012192133942789951
NQLKIEAQAR	10	Unmodified	_NQLKIEAQAR_					0	0	0			REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845031619072	3	390.891166	1169.65167	1.7491	0.00068369	-3.476	-0.0013587	-1.7269	-0.00067505	390.8894033213572	48.266	0.54682	48.596	48.399	48.945	0.33034					25	17	2	0	0	0	0.12556	1	20314	20314		0.13989	0	1	661550	+		23671	14406	11739	11792	27241	27241					0.07363006657601545
NQLKIEAQAR	10	Unmodified	_NQLKIEAQAR_					0	0	0			REV__nc|ENSG00000104450|Q07617-2|SPAG1	REV__nc|ENSG00000104450|Q07617-2|SPAG1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	390.891166	1169.65167	0.23544	9.2033E-05	-2.1683	-0.00084758	-1.9329	-0.00075555	390.8896564618844	48.774	0.63694	48.774	48.552	49.189	0	0.0888	0.00065889	NaN	0.13989	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	731450	+		23672	14406	11739	11792							0.07363006657601545
NQLQKLVKRL	10	Unmodified	_NQLQKLVKRL_					0	0	0		tr|A0A553SRD5|A0A553SRD5_NIACIDUF4279domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00875PE=4SV=1	tr|A0A553SRD5|A0A553SRD5_NIACIDUF4279domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00875PE=4SV=1	tr|A0A553SRD5|A0A553SRD5_NIACIDUF4279domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00875PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1347839236259	4	310.702849	1238.78229	-2.6599	-0.00082642	2.2377	0.00069525	-0.42219	-0.00013118	310.7029921237047	31.848	0.93446	31.848	31.291	32.225	0					69	29	3	0	0	0	0.12561	1	13264	13264		0	0	1	1506700			23673	16550	11740	11793	27242	27242					0.1724502237645993
NQLSNEFYLDE	11	Unmodified	_NQLSNEFYLDE_					0	0	0			REV__nc|ENSG00000142606|Q495T6-3|MMEL1	REV__nc|ENSG00000142606|Q495T6-3|MMEL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	686.3075439333916	2	686.306789	1370.59903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.1	1	45.1	44.6	45.6	0								0	0	0	0.63771	1	18873	18873		11.495	0	1		+		23674	10182	11741	11794	27243	27243					-0.07145040986551976
NQLSNEFYLDE	11	Unmodified	_NQLSNEFYLDE_					0	0	0			REV__nc|ENSG00000142606|Q495T6-3|MMEL1	REV__nc|ENSG00000142606|Q495T6-3|MMEL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	686.3077880740166	2	686.306789	1370.59903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.222	1	45.222	44.722	45.722	0								0	0	0	0.63774	1	18923	18923		7.609	0	1		+		23675	10182	11741	11794	27244	27244					-0.07145040986551976
NQLSNEFYLDE	11	Unmodified	_NQLSNEFYLDE_					0	0	0			REV__nc|ENSG00000142606|Q495T6-3|MMEL1	REV__nc|ENSG00000142606|Q495T6-3|MMEL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	686.3078491091728	2	686.306789	1370.59903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.931	1	45.257	44.757	45.757	0.32674								0	0	0	0.63771	1	18868	18868		11.495	0	1		+		23676	10182	11741	11794	27245	27245					-0.07145040986551976
NQNSDCKQH	9	Unmodified	_NQNSDCKQH_					0	0	0		ENSG00000187672|ENST00000288221|ERC2	ENSG00000187672|ENST00000288221|ERC2	ENSG00000187672|ENST00000288221|ERC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.2236816287041	2	537.225079	1072.43561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.501	1	12.501	12.001	13.001	0								0	0	0	0.41514	1	5174	5174		7.2892	0.93513	1				23677	4833	11742	11795	27246	27246					-0.09771497518545402
NQQQCSKRA	9	Unmodified	_NQQQCSKRA_					0	0	0			REV__nc|ENSG00000260314|P22897-2|MRC1	REV__nc|ENSG00000260314|P22897-2|MRC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0700866580009	3	354.841818	1061.50363	1.7137	0.0006081	-1.1169	-0.00039634	0.59679	0.00021176	354.8419181692097	61.318	0.43877	63.276	63.058	63.497	1.9571					14	13	2	0	0	0	0.11941	1	25729	25729		0	0	1	522470	+		23678	11984	11743	11796	27247	27247					-0.024666278678978415
NQRIRFQK	8	Unmodified	_NQRIRFQK_					0	0	0			REV__ENST00000466202.5_1_7:123152389-123172522:-|nuORF	REV__ENST00000466202.5_1_7:123152389-123172522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3173705935478	2	545.317432	1088.62031	1.5524	0.00084657	-0.29447	-0.00016058	1.258	0.00068599	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.89051	1	31125	31125		2.3027	0.24298	1	3210400	+		23679	12935	11744	11797	27248	27248					0.07954478414171717
NQRRHLLGF	9	Unmodified	_NQRRHLLGF_					0	0	0		ENSG00000118217|ENST00000367942|ATF6	ENSG00000118217|ENST00000367942|ATF6	ENSG00000118217|ENST00000367942|ATF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8865234255791	3	380.884346	1139.63121	0.95061	0.00036207	3.3081	0.00126	4.2587	0.0016221	380.8856156694533	50.441	0.91043	52.416	51.786	52.697	1.9753					90	29	4	0	0	0	0.76456	1	21041	21041		2.7352	0	1	14245000			23680	2033	11745	11798	27249	27249					0.06697880788487964
NQRRLSHLF	9	Unmodified	_NQRRLSHLF_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2845641970634	3	390.887868	1169.64177	1.9074	0.00074559	2.6284	0.0010274	4.5358	0.001773	390.88919699534677	43.5	0.55411	45.444	45.339	45.893	1.9438					31	17	2	0	0	0	0.11938	1	18358	18358		1.1933	0.12188	1	1532100	+		23681	10466	11746	11799	27250	27250					0.06373863442900074
NQRRRRWWGIA	11	Unmodified	_NQRRRRWWGIA_					0	0	0			REV__ENST00000419381.1_2_2:70409123-70410019:-|nuORF	REV__ENST00000419381.1_2_2:70409123-70410019:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2807494997978	3	500.27987	1497.81778	0.4072	0.00020371	0.080141	4.0093E-05	0.48734	0.00024381	500.613526389446	25.189	0.17681	26.905	26.789	26.966	1.7167					13	5	3	0	0	0	1.0365	1	10532	10532		1.2148	0	1	924650	+		23682	12213	11747	11800	27251	27251					0.08878497676846564
NQYDFPSSDE	10	Unmodified	_NQYDFPSSDE_					0	0	0		EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant;nc|ENSG00000120616|Q9H2F5-3|EPC1;ENSG00000120616|ENST00000319778|EPC1;nc|ENSG00000120616|Q9H2F5|EPC1;ENST00000495790.1_1_10:32575832-32580264:-|nuORF	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	EPC1|p.A656Dfs*9|1|0.12|ENSG00000120616|chr10:32272133-32272133|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	401.1606933474541	3	401.159647	1200.45711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.8	103.3	104.3	0								0	0	0	0.66222	1	43666	43666		0.69767	0.19171	1				23683	2111	11748	11801	27252	27252					-0.13509834008846155
NQYHPSANQL	10	Unmodified	_NQYHPSANQL_					0	0	0			REV__ENST00000490812.5_1_2:131128247-131129758:+|nuORF	REV__ENST00000490812.5_1_2:131128247-131129758:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	585.7798339724541	2	586.278169	1170.54179	2.0273	0.0011886	3.9878	0.002338	6.0152	0.0035266	586.2806552945468	66.09	0.57379	67.479	67.329	67.903	1.3888					22	18	2	0	0	0	0.12412	1	27789	27789		10.074	0	1	766100	+		23684	8733	11749	11802	27253	27253					-0.03666418681586947
NQYRLTSLY	9	Unmodified	_NQYRLTSLY_					0	0	0		LFNG-MAD1L1|1|fusion;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;ENSG00000002822|ENST00000265854|MAD1L1	LFNG-MAD1L1|1|fusion	LFNG-MAD1L1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3029662966728	2	579.301113	1156.58767	2.728	0.0015803	1.234	0.00071485	3.962	0.0022952	579.3017068564793	76.313	0.37779	78.08	77.845	78.222	1.7672					30	11	3	0	0	0	0.073578	1	32006	32006		58.679	0	1	4876400			23685	462	11750	11803	27254	27254					0.01564226500681798
NQYRLTSLY	9	Unmodified	_NQYRLTSLY_					0	0	0		LFNG-MAD1L1|1|fusion;nc|ENSG00000002822|Q9Y6D9-3|MAD1L1;nc|ENSG00000002822|Q9Y6D9-4|MAD1L1;ENSG00000002822|ENST00000265854|MAD1L1	LFNG-MAD1L1|1|fusion	LFNG-MAD1L1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	579.301113	1156.58767	2.4662	0.0014287	1.3169	0.0007629	3.7832	0.0021916	579.3018705864921	76.778	0.40516	78.072	77.857	78.262	1.2938	-0.0043122	4.7577E-05	NaN	58.679	33	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4617200			23686	462	11750	11803							0.01564226500681798
NRCSRLYLL	9	Unmodified	_NRCSRLYLL_					0	0	0			REV__B3GNT2|p.R124_C125insS|1|0.03|ENSG00000170340|chr2:62222592-62222593|-/AGC|inframe_insertion	REV__B3GNT2|p.R124_C125insS|1|0.03|ENSG00000170340|chr2:62222592-62222593|-/AGC|inframe_insertion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	568.8557617068291	2	569.3135	1136.61245	2.4908	0.001418	1.6783	0.00095546	4.1691	0.0023735	569.8151441069448	88.473	0.15813	88.707	88.598	88.756	0.23471					5	4	2	0	0	0	0.11833	1	37098	37098		1.8442	0	1	124470	+		23687	8158	11751	11804	27255	27255					0.049605831023882274
NRCSRLYLL	9	Unmodified	_NRCSRLYLL_					0	0	0			REV__B3GNT2|p.R124_C125insS|1|0.03|ENSG00000170340|chr2:62222592-62222593|-/AGC|inframe_insertion	REV__B3GNT2|p.R124_C125insS|1|0.03|ENSG00000170340|chr2:62222592-62222593|-/AGC|inframe_insertion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	569.3135	1136.61245	4.8806	0.0027786	2.3805	0.0013553	7.2612	0.0041339	569.3151163568106	87.742	0.25153	88.834	88.643	88.895	1.0918	0.063438	0.00027976	NaN	1.8442	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456420	+		23688	8158	11751	11804							0.049605831023882274
NRDKEGSG	8	Unmodified	_NRDKEGSG_					0	0	0		tr|A0A7D6VNL5|A0A7D6VNL5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13405PE=4SV=1	tr|A0A7D6VNL5|A0A7D6VNL5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13405PE=4SV=1	tr|A0A7D6VNL5|A0A7D6VNL5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13405PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	862.4033080935478	1	862.401335	861.394058	2.4949	0.0021516	-0.81033	-0.00069883	1.6846	0.0014528	862.4005861806038	78.415	0.45819	79.682	79.421	79.879	1.2668					38	14	4	0	0	0	0.79422	1	32923	32923		21.747	2.4897	1	6061800			23689	16738	11752	11805	27256	27256					-0.0421831021556045
NREFDDVPD	9	Unmodified	_NREFDDVPD_					0	0	0			REV__tr|A0A553SG94|A0A553SG94_NIACIRibonucleaseOS=NialliacirculansOX=1397GN=CEQ21_10375PE=4SV=1	REV__tr|A0A553SG94|A0A553SG94_NIACIRibonucleaseOS=NialliacirculansOX=1397GN=CEQ21_10375PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	553.8285400271416	2	553.741085	1105.46762	3.2508	0.0018001	-0.81041	-0.00044876	2.4404	0.0013513	553.7409189421959	60.375	0.22133	62.34	62.26	62.482	1.9653					10	6	2	0	0	0	0.11518	1	25328	25328		11.64	5.8799	1	629080	+		23690	14737	11753	11806	27257	27257					-0.08089806563771162
NRERNRRIWLH	11	Unmodified	_NRERNRRIWLH_					0	0	0			REV__ENST00000474593.1_1_6:73985278-74020035:-|nuORF	REV__ENST00000474593.1_1_6:73985278-74020035:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6264526247978	3	517.290546	1548.84981	1.4607	0.00075563	1.2117	0.00062681	2.6725	0.0013824	517.6252793759891	113.5	7.1668	113.5	112.85	120.01	0					631	222	3	0	0	0	1.0402	1	51115	51115		0.094841	0	1	6251800	+		23691	13308	11754	11807	27258	27258					0.09733865359976335
NRERNRRIWLH	11	Unmodified	_NRERNRRIWLH_					0	0	0			REV__ENST00000474593.1_1_6:73985278-74020035:-|nuORF	REV__ENST00000474593.1_1_6:73985278-74020035:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6265746951103	3	517.290546	1548.84981	3.3618	0.001739	1.4338	0.0007417	4.7956	0.0024807	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0402	1	49617	49617		0.094841	0	1	11283000	+		23692	13308	11754	11807	27259	27259					0.09733865359976335
NRGSVKVRKT	10	Unmodified	_NRGSVKVRKT_					0	0	0			REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1144.693408191204	1	1144.69092	1143.68364	3.9282	0.0044966	-1.5907	-0.0018209	2.3375	0.0026757	1144.6885960727793	104.79	0.073868	104.84	104.8	104.87	0.056801					9	3	3	0	0	0	0.89803	1	44289	44289		0.35063	0.35063	1	33824000	+		23693	15260	11755	11808	27260	27260					0.11754419131420946
NRGSVKVRKT	10	Unmodified	_NRGSVKVRKT_					0	0	0			REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1144.69092	1143.68364	3.9282	0.0044966	-1.5907	-0.0018209	2.3375	0.0026757	1144.6885960727793	104.79	0.073868	104.84	104.8	104.87	0.056801	-0.044463	-0.00070547	NaN	0.35063	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33824000	+		23694	15260	11755	11808							0.11754419131420946
NRGSVKVRKT	10	Unmodified	_NRGSVKVRKT_					0	0	0			REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1144.69092	1143.68364	2.7738	0.0031751	-0.18485	-0.0002116	2.5889	0.0029635	1144.690025157701	104.77	0.076057	104.93	104.86	104.93	0.16055	0.038293	0.0009038	NaN	0.35063	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37507000	+		23695	15260	11755	11808							0.11754419131420946
NRGSVKVRKT	10	Unmodified	_NRGSVKVRKT_					0	0	0			REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	REV__tr|A0A553STT5|A0A553STT5_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05510PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1144.69092	1143.68364	3.0002	0.0034343	-0.44679	-0.00051144	2.5534	0.0029229	1144.6908896721993	104.72	0.077225	104.89	104.85	104.92	0.1731	0.0061697	0.00060396	NaN	0.35063	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23252000	+		23696	15260	11755	11808							0.11754419131420946
NRIPVIGPLKI	11	Unmodified	_NRIPVIGPLKI_					0	0	0		ENST00000565460.1_1_16:68289553-68293557:+|nuORF;nc|ENSG00000103066|Q8NCC3-2|PLA2G15;ENSG00000103066|ENST00000219345|PLA2G15	ENST00000565460.1_1_16:68289553-68293557:+|nuORF	ENST00000565460.1_1_16:68289553-68293557:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.3968994021416	2	610.39789	1218.78123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.45	1	107.61	107.11	108.11	0.15781								0	0	0	0.63775	1	46219	46219		0.30703	0.30703	1				23697	1417	11756	11809	27261	27261					0.1805880800752675
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2509643435478	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.86	1	114.86	114.36	115.36	0								0	0	0	0.42693	1	49580	49580		0.96228	0.33545	1				23698	7169	11757	11810	27262	27262					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2510864138603	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.12	1	116.12	115.62	116.62	0								0	0	0	0.42693	1	50097	50097		1.0715	0	1				23699	7169	11757	11810	27263	27263					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2525207400322	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.082	1	20.141	19.641	20.641	1.0585								0	0	0	0.42693	1	7951	7951		0.96228	0.26461	1				23700	7169	11757	11810	27264	27264					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509948611259	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.25	1	114.43	113.93	114.93	0.17579								0	0	0	0.42693	1	49510	49510		0.96228	0.33545	1				23701	7169	11757	11810	27265	27265					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509643435478	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.01	1	115.19	114.69	115.69	0.18399								0	0	0	0.42693	1	49813	49813		0.96228	0.33545	1				23702	7169	11757	11810	27266	27266					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2508727908134	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.19	1	115.37	114.87	115.87	0.18399								0	0	0	0.42693	1	49886	49886		0.96228	0.33545	1				23703	7169	11757	11810	27267	27267					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509338259697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.67	1	118.9	118.4	119.4	0.23128								0	0	0	0.42693	1	51290	51290		0.96228	0.33545	1				23704	7169	11757	11810	27268	27268					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2506286501884	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.66	1	119.9	119.4	120.4	0.243								0	0	0	0.42693	1	51687	51687		0.23584	0.076522	1				23705	7169	11757	11810	27269	27269					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507202029228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.77	1	120.01	119.51	120.51	0.243								0	0	0	0.42693	1	51734	51734		0.96228	0.33545	1				23706	7169	11757	11810	27270	27270					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2523681521416	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.224	1	95.413	94.913	95.913	1.1887								0	0	0	0.42693	1	39642	39642		0.96228	0	1				23707	7169	11757	11810	27271	27271					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520324587822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.61	1	113.76	113.26	114.26	0.14912								0	0	0	0.42693	1	49180	49180		0.96228	0.33545	1				23708	7169	11757	11810	27272	27272					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2509033083916	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.86	1	114.01	113.51	114.51	0.14912								0	0	0	0.42693	1	49280	49280		0.23584	0.076522	1				23709	7169	11757	11810	27273	27273					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510253787041	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.23	1	115.38	114.88	115.88	0.14976								0	0	0	0.42693	1	49831	49831		0.96228	0.33545	1				23710	7169	11757	11810	27274	27274					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2511169314384	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.91	1	117.06	116.56	117.56	0.15606								0	0	0	0.42693	1	50509	50509		1.0715	0.3738	1				23711	7169	11757	11810	27275	27275					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2511169314384	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.88	1	118.04	117.54	118.54	0.15606								0	0	0	0.42693	1	50905	50905		0.96228	0.33545	1				23712	7169	11757	11810	27276	27276					0.14134698402403956
NRKKKEKKH	9	Unmodified	_NRKKKEKKH_					0	0	0		ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	ENST00000531629.1_1_11:121971799-121971931:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2507202029228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.19	1	118.35	117.85	118.85	0.16237								0	0	0	0.42693	1	51029	51029		0.96228	0.33545	1				23713	7169	11757	11810	27277	27277					0.14134698402403956
NRKKSILSVLT	11	Unmodified	_NRKKSILSVLT_					0	0	0			REV__ENSG00000204246|ENST00000641090|OR13C3	REV__ENSG00000204246|ENST00000641090|OR13C3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	630.3969604372978	2	629.895712	1257.77687	2.8905	0.0018207	-1.0236	-0.00064478	1.8668	0.0011759	629.8949990451944	107.37	0.26463	107.53	107.36	107.62	0.15781					38	13	4	0	0	0	1.0366	1	46103	46103		1.1933	0	1	129150000	+		23714	10335	11758	11811	27278	27278					0.1582929879398307
NRKRPIILIG	10	Unmodified	_NRKRPIILIG_					0	0	0		RAD51B-MPP5|1|fusion;nc|ENSG00000072415|Q8N3R9-2|PALS1;ENSG00000072415|ENST00000261681|PALS1	RAD51B-MPP5|1|fusion	RAD51B-MPP5|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3895141482353	2	590.387857	1178.76116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.91	1	108.07	107.57	108.57	0.15795								0	0	0	0.66176	1	46486	46486		1.4819	0	1				23715	882	11759	11812	27279	27279					0.17893057067612972
NRKRVNVRRA	10	Unmodified	_NRKRVNVRRA_					0	0	0			REV__ENST00000464256.1_1_21:34132086-34144033:-|nuORF	REV__ENST00000464256.1_1_21:34132086-34144033:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.6001464724541	3	423.597199	1267.76977	4.1516	0.0017586	0.076543	3.2423E-05	4.2282	0.001791	423.59720599206855	93.597	0.57309	94.468	94.194	94.767	0.87176					55	17	5	0	0	0	0.89803	1	39329	39329		0.15932	0	1	13232000	+		23716	10568	11760	11813	27280	27280					0.14659423756779688
NRLAKKIIPL	10	Unmodified	_NRLAKKIIPL_					0	0	0			REV__ENST00000357103.4_1_12:1863654-1887044:+|nuORF	REV__ENST00000357103.4_1_12:1863654-1887044:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3933593630791	2	583.392608	1164.77066	1.2724	0.00074231	0.39877	0.00023264	1.6712	0.00097495	583.3928635231267	107.52	0.21248	107.52	107.41	107.62	0					33	10	5	0	0	0	0.89803	1	46146	46146		0.45834	0	1	238000000	+		23717	12559	11761	11814	27281	27281					0.19486825353146742
NRLAKKIIPL	10	Unmodified	_NRLAKKIIPL_					0	0	0			REV__ENST00000357103.4_1_12:1863654-1887044:+|nuORF	REV__ENST00000357103.4_1_12:1863654-1887044:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	583.392608	1164.77066	1.2724	0.00074231	0.39877	0.00023264	1.6712	0.00097495	583.3928635231267	107.52	0.21248	107.52	107.41	107.62	0	-0.015974	0.00041557	NaN	0.45834	33	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	238000000	+		23718	12559	11761	11814							0.19486825353146742
NRLDRLIRA	9	Unmodified	_NRLDRLIRA_					0	0	0		tr|A0A553SU59|A0A553SU59_NIACIGlycosidehydrolasefamily5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06280PE=4SV=1	tr|A0A553SU59|A0A553SU59_NIACIGlycosidehydrolasefamily5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06280PE=4SV=1	tr|A0A553SU59|A0A553SU59_NIACIGlycosidehydrolasefamily5domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06280PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2336303591728	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.787	1	61.115	60.615	61.615	0.32809								0	0	0	0.42693	1	25469	25469		0.96228	0.26461	1				23719	16679	11762	11815	27282	27282					0.11526436476992785
NRLFKPDV	8	Unmodified	_NRLFKPDV_					0	0	0			REV__ENSG00000162244|ENST00000294189|RPL29	REV__ENSG00000162244|ENST00000294189|RPL29	MSMS	GG20161007_CRH_Patient100_A02_02	2	330.1912109255791	3	330.190665	987.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.15	1	103.21	102.71	103.71	0.059502								0	0	0	1.0178	1	43231	43231		1.4819	1.0812	1		+		23720	10637	11763	11816	27283	27283					0.0558918002569726
NRLFRWEREKR	11	Unmodified	_NRLFRWEREKR_					0	0	0			REV__BAIAP2-RPTOR|1|fusion	REV__BAIAP2-RPTOR|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.4668456912041	3	530.630569	1588.86988	1.2644	0.00067091	-0.91219	-0.00048404	0.35218	0.00018688	530.6295129932117	28.634	0.18556	28.634	28.473	28.659	0					7	5	2	0	0	0	0.14606	1	11971	11971		0.45452	0	1	573700	+		23721	8159	11764	11817	27284	27284					0.09899616299890113
NRLLIYLLLVR	11	Unmodified	_NRLLIYLLLVR_					0	0	0			REV__nc|ENSG00000076944|Q15833-2|STXBP2	REV__nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	463.1302673220634	3	462.63789	1384.89184	3.525	0.0016308	3.6862	0.0017054	7.2112	0.0033362	462.6397603236374	107.25	0.11887	107.4	107.33	107.45	0.15795					13	5	3	0	0	0	0.14606	1	46051	46051		0.094841	0	1	9141800	+		23722	8773	11765	11818	27285	27285					0.21479027995769684
NRLLLLHGFL	10	Unmodified	_NRLLLLHGFL_					0	0	0		ENST00000560048.2_1_15:65743312-65748006:-|nuORF;nc|ENSG00000074603|Q6V1X1-6|DPP8;nc|ENSG00000074603|Q6V1X1-4|DPP8;nc|ENSG00000074603|Q6V1X1-2|DPP8;nc|ENSG00000074603|Q6V1X1-5|DPP8;ENSG00000074603|ENST00000300141|DPP8;nc|ENSG00000074603|Q6V1X1|DPP8	ENST00000560048.2_1_15:65743312-65748006:-|nuORF	ENST00000560048.2_1_15:65743312-65748006:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2498657107353	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.52	1	110.56	110.06	111.06	0.047043								0	0	0	0.66254	1	47671	47671		0.15932	0	1				23723	915	11766	11819	27286	27286					0.13413965802010352
NRLLTPFL	8	Unmodified	_NRLLTPFL_					0	0	0			REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	REV__ENST00000581487.1_1_16:66655025-66655589:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2918578982353	2	487.295102	972.575651	3.2489	0.0015832	-3.0539	-0.0014882	0.19503	9.5035E-05	487.2935502505455	72.627	0.46631	73.957	73.822	74.288	1.3297					19	14	2	0	0	0	0.87655	1	30444	30444		11.114	0.93107	1	1054500	+		23724	14002	11767	11820	27287	27287					0.08826654548113311
NRLRINLRA	9	Unmodified	_NRLRINLRA_					0	0	0			REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	REV__ENST00000537276.5_1_12:123416657-123444319:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3525878787041	2	563.351806	1124.68906	2.2434	0.0012638	-0.10544	-5.9401E-05	2.138	0.0012044	563.3517014406947	83.206	0.98624	83.476	83.029	84.016	0.27029					60	31	3	0	0	0	0.84963	1	34870	34870		0.6015	0	1	1708100	+		23725	10393	11768	11821	27288	27288					0.13170142713852329
NRLRWFWRDKF	11	Unmodified	_NRLRWFWRDKF_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.2949706912041	3	541.960026	1622.85825	1.7861	0.00096798	-0.68328	-0.00037031	1.1028	0.00059767	541.9595950651199	41.946	0.34967	42.267	42.103	42.452	0.32058					27	11	3	0	0	0	1.0405	1	17585	17585		0	0	1	1104500	+		23726	9687	11769	11822	27289	27289					0.07173419276546156
NRLRWFWRDKF	11	Unmodified	_NRLRWFWRDKF_					0	0	0			REV__ENSG00000125966|ENST00000246186|MMP24	REV__ENSG00000125966|ENST00000246186|MMP24	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	542.2949706912041	3	541.960026	1622.85825	1.7861	0.00096798	-0.68328	-0.00037031	1.1028	0.00059767	541.9595950651199	41.946	0.34967	42.267	42.103	42.452	0.32058					27	11	3	0	0	0	0.14606	1	17585	17585		0	0	1	1104500	+		23727	9687	11769	11822	27290	27290					0.07173419276546156
NRLTKEQLKQI	11	Unmodified	_NRLTKEQLKQI_					0	0	0		RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant;RNF167|p.E286Gfs*16|1|0.04|ENSG00000108523|chr17:4944819-4944820|-/GTGACATGATAAAACAGAA|frameshift_variant;RNF167|p.T316Lfs*9|1|0.11|ENSG00000108523|chr17:4944909-4944909|A/-|frameshift_variant;ENSG00000108523|ENST00000262482|RNF167;nc|ENSG00000108523|Q9H6Y7-2|RNF167	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	RNF167|p.E285Dfs*11|1|0.04|ENSG00000108523|chr17:4944817-4944818|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9114868044853	2	685.90935	1369.80415	2.4567	0.0016851	-1.0863	-0.0007451	1.3704	0.00093998	685.9081370459064	83.221	1.4749	83.221	82.277	83.752	0					104	47	3	0	0	0	1.037	1	34501	34501		1.0715	0.67075	1	2273600			23728	1637	11770	11823	27291	27291					0.1340378233435331
NRNRIKGIL	9	Unmodified	_NRNRIKGIL_					0	0	0		tr|A0A7D6VSN6|A0A7D6VSN6_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23470PE=4SV=1	tr|A0A7D6VSN6|A0A7D6VSN6_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23470PE=4SV=1	tr|A0A7D6VSN6|A0A7D6VSN6_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23470PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3425170779228	2	542.340907	1082.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.27	1	107.32	106.82	107.82	0.052452								0	0	0	0.42693	1	45849	45849		1.8442	1.1539	1				23729	16877	11771	11824	27292	27292					0.1292333796532148
NRRIIKKA	8	Unmodified	_NRRIIKKA_					0	0	0		nc|ENSG00000104218|Q1MSJ5-1|CSPP1;ENSG00000104218|ENST00000678616|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1	nc|ENSG00000104218|Q1MSJ5-1|CSPP1	nc|ENSG00000104218|Q1MSJ5-1|CSPP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	998.6617919802666	1	998.658158	997.650882	4.0083	0.0040029	0.083608	8.3496E-05	4.0919	0.0040864	998.6576235668533	106.95	0.17797	107.11	106.99	107.17	0.15781					26	7	5	0	0	0	0.89051	1	45865	45865		2.3027	0	1	647310000			23730	1453	11772	11825	27293	27293					0.15196256799231378
NRRIIKKA	8	Unmodified	_NRRIIKKA_					0	0	0		nc|ENSG00000104218|Q1MSJ5-1|CSPP1;ENSG00000104218|ENST00000678616|CSPP1;nc|ENSG00000104218|Q1MSJ5|CSPP1	nc|ENSG00000104218|Q1MSJ5-1|CSPP1	nc|ENSG00000104218|Q1MSJ5-1|CSPP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	998.6613647341728	1	998.658158	997.650882	3.6083	0.0036035	0.814	0.00081291	4.4223	0.0044164	998.6583358358673	106.91	0.15085	107.07	107	107.15	0.16174					25	6	5	0	0	0	0.89051	1	45800	45800		2.3027	0	1	547410000			23731	1453	11772	11825	27294	27294					0.15196256799231378
NRRKIWEI	8	Unmodified	_NRRKIWEI_					0	0	0		ENST00000496874.1_1_16:304458-304518:+|nuORF	ENST00000496874.1_1_16:304458-304518:+|nuORF	ENST00000496874.1_1_16:304458-304518:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.8291503787041	2	557.827632	1113.64071	1.7255	0.00096251	2.3331	0.0013015	4.0586	0.002264	557.8289243739202	79.561	0.38249	79.862	79.686	80.069	0.30047					17	11	2	0	0	0	0.83518	1	33276	33276		18.135	0	1	603360			23732	6959	11773	11826	27295	27295					0.08843649073969573
NRRKKPGRRG	10	Unmodified	_NRRKKPGRRG_					0	0	0			REV__ENST00000554659.5_1_14:68129237-68141235:-|nuORF	REV__ENST00000554659.5_1_14:68129237-68141235:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	612.8799316287041	2	612.879053	1223.74355	2.5583	0.0015679	-0.46096	-0.00028251	2.0973	0.0012854	612.8786801172273	92.37	0.55605	92.538	92.281	92.837	0.16835					67	17	5	0	0	0	0.89803	1	38738	38738		1.6526	0	1	38741000	+		23733	13857	11774	11827	27296	27296					0.14063154585301163
NRRKLPKH	8	Unmodified	_NRRKLPKH_					0	0	0		EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.8291503787041	2	524.827966	1047.64138	2.5784	0.0013532	-1.0448	-0.00054832	1.5337	0.00080491	524.8275227110491	83.791	1.0292	84.061	83.739	84.768	0.27029					94	32	5	0	0	0	0.89176	1	34995	34995		0.79363	0	1	209110000			23734	7579	11775	11828	27297	27297					0.11946488513672193
NRRKRPTKR	9	Unmodified	_NRRKRPTKR_					0	0	0			REV__ENST00000332290.3_1_6:170103039-170103093:+|nuORF	REV__ENST00000332290.3_1_6:170103039-170103093:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.5903503298759	3	404.590045	1210.7483	0.8918	0.00036081	-1.966	-0.00079541	-1.0742	-0.00043459	404.58914223863496	23.152	0.7179	23.385	23.096	23.814	0.23306					53	22	3	0	0	0	0.84771	1	9669	9669		0.86438	0.23755	1	725030	+		23735	12450	11776	11829	27298	27298					0.15136038728041967
NRRLVGLL	8	Unmodified	_NRRLVGLL_					0	0	0			REV__ENST00000256442.9_1_5:68462964-68463831:+|nuORF	REV__ENST00000256442.9_1_5:68462964-68463831:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	470.2044555544853	2	470.806168	939.597784	3.481	0.0016389	2.0546	0.00096732	5.5356	0.0026062	470.8068218808333	101.46	0.1229	101.53	101.45	101.58	0.067009					7	3	3	0	0	0	2.3239	1	42498	42498		0.79363	0	1	1918800	+		23736	12165	11777	11830	27299	27299					0.12556879016574385
NRRMIWFFRPK	11	Unmodified	_NRRMIWFFRPK_					0	0	0			REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.9589721560478	3	517.622357	1549.84524	2.1213	0.001098	2.0181	0.0010446	4.1394	0.0021426	517.6240166727141	55.447	0.56921	55.447	55.22	55.789	0					36	22	2	0	0	0	1.0362	1	23105	23105		0.45452	0	1	1881700	+		23737	12103	11778	11831	27300	27300					0.09231264892832769
NRRMIWFFRPK	11	Unmodified	_NRRMIWFFRPK_					0	0	0			REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6248657107353	3	517.622357	1549.84524	1.9058	0.00098649	-1.5254	-0.00078959	0.38039	0.0001969	517.6221293879064	47.177	4.8522	47.508	46.848	51.7	0.33034					537	158	6	0	0	0	1.0131	4	20927	20927;21028;21133;21473		1.2148	0.70888	1	123180000	+		23738	12103	11778	11831	27301;27302;27303;27304	27301					0.09231264892832769
NRRMIWFFRPK	11	Unmodified	_NRRMIWFFRPK_					0	0	0			REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6254760622978	3	517.622357	1549.84524	1.8454	0.00095521	-0.70344	-0.00036411	1.142	0.0005911	517.6227962933076	45.679	4.9601	47.65	47.343	52.303	1.9703					374	159	5	0	0	0	1.0131	1	19892	19892		1.2148	0.70888	1	11964000	+		23739	12103	11778	11831	27305	27305					0.09231264892832769
NRRMIWFFRPK	11	Unmodified	_NRRMIWFFRPK_					0	0	0			REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	REV__ENST00000231572.7_1_5:167943936-167944917:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6235839724541	3	517.622357	1549.84524	0.61998	0.00032092	0.9533	0.00049345	1.5733	0.00081437	517.6233391650732	50.45	0.78001	52.425	52.277	53.057	1.9753					41	26	2	0	0	0	1.0131	1	21233	21233		1.2148	0	1	3529100	+		23740	12103	11778	11831	27306	27306					0.09231264892832769
NRRRKITLMVG	11	Unmodified	_NRRRKITLMVG_					0	0	0			REV__PTPRT|p.S834Ffs*21|1|0.38|ENSG00000196090|chr20:42161522-42161534|GCTCCCCGCGGCT/-|frameshift_variant	REV__PTPRT|p.S834Ffs*21|1|0.38|ENSG00000196090|chr20:42161522-42161534|GCTCCCCGCGGCT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4116088747978	2	672.406255	1342.79796	2.2311	0.0015002	3.2119	0.0021597	5.443	0.0036599	672.4084396282121	81.377	1.4672	81.377	80.478	81.946	0					66	47	2	0	0	0	1.0388	3	33847	33847;33903;33955		0.35063	0.043601	1	2220000	+		23741	8307	11779	11832	27307;27308;27309	27307					0.14026985621831045
NRRRVLWLRPK	11	Unmodified	_NRRRVLWLRPK_					0	0	0		STK10|p.K56Rfs*39|1|0.05|ENSG00000072786|chr5:172156778-172156778|T/-|frameshift_variant	STK10|p.K56Rfs*39|1|0.05|ENSG00000072786|chr5:172156778-172156778|T/-|frameshift_variant	STK10|p.K56Rfs*39|1|0.05|ENSG00000072786|chr5:172156778-172156778|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	373.9844543337822	4	374.237656	1492.92152	0.060323	2.2575E-05	-3.6864	-0.0013796	-3.626	-0.001357	374.2348716102315	28.869	0.48665	30.152	29.917	30.404	1.2825					41	15	4	0	0	0	1.039	1	12088	12088		0.45452	0.046251	1	872880			23742	16007	11780	11833	27310	27310					0.19477404784493046
NRRSRRRRTEV	11	Unmodified	_NRRSRRRRTEV_					0	0	0			REV__nc|ENSG00000048649|Q96T23-3|RSF1	REV__nc|ENSG00000048649|Q96T23-3|RSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9613830447197	3	495.957567	1484.85087	4.8226	0.0023918	3.0846	0.0015298	7.9072	0.0039216	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0084	1	38031	38031		1.3296	0.82369	1	3813600	+		23743	8612	11781	11834	27311	27311					0.12784079728862707
NRRVPRLT	8	Unmodified	_NRRVPRLT_					0	0	0			REV__chr11:59173379-59181739|258|11.93|0.67|4.16|+|2|None,DTX4|1	REV__chr11:59173379-59181739|258|11.93|0.67|4.16|+|2|None,DTX4|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.7274658083916	3	337.877192	1010.60975	-2.325	-0.00078557	-3.5759	-0.0012082	-5.9009	-0.0019938	337.87583129298434	24.629	0.24311	24.629	24.461	24.704	0					10	7	2	0	0	0	2.3239	1	10281	10281		3.2813	0.99853	1	488710	+		23744	8237	11782	11835	27312	27312					0.1048649575974423
NRRYKTKRR	9	Unmodified	_NRRYKTKRR_					0	0	0		ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.5934020876884	3	426.593566	1276.75887	2.002	0.00085405	-1.83	-0.00078068	0.17197	7.3363E-05	426.5925712615957	40.079	0.53226	40.391	40.227	40.759	0.31263					30	16	3	0	0	0	0.84771	1	16938	16938		0.86438	0.45611	1	1606900			23745	1674	11783	11836	27313	27313					0.13156021382496874
NRRYKTKRR	9	Unmodified	_NRRYKTKRR_					0	0	0		ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	ENSG00000109705|ENST00000382438|NKX3-2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.5935241580009	3	426.593566	1276.75887	1.8603	0.00079361	-3.8606	-0.0016469	-2.0003	-0.00085331	426.59180064597575	38.663	0.23729	39.959	39.895	40.132	1.2961					11	7	2	0	0	0	0.84771	1	16232	16232		0.86438	0.16671	1	971410			23746	1674	11783	11836	27314	27314					0.13156021382496874
NRVPLVVI	8	Unmodified	_NRVPLVVI_					0	0	0			REV__MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	REV__MYCBP2|p.D2940Mfs*5|1|0.04|ENSG00000005810|chr13:77098223-77098223|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2999145388603	2	455.297645	908.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.45	1	103.64	103.14	104.14	0.18066								0	0	0	1.0178	1	43570	43570		0.69038	0	1		+		23747	8501	11784	11837	27315	27315					0.12278958410763607
NRVPRSRP	8	Unmodified	_NRVPRSRP_					0	0	0		ENST00000285243.6_1_17:48785076-48785277:-|nuORF	ENST00000285243.6_1_17:48785076-48785277:-|nuORF	ENST00000285243.6_1_17:48785076-48785277:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2902709841728	2	491.288674	980.562795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.58	1	101.75	101.25	102.25	0.17032								0	0	0	1.0178	1	42741	42741		4.756	0.42677	1				23748	5712	11785	11838	27316	27316					0.07173636208608514
NRVRRFKRIFI	11	Unmodified	_NRVRRFKRIFI_					0	0	0		ENST00000261254.7_1_12:4413568-4413715:+|nuORF	ENST00000261254.7_1_12:4413568-4413715:+|nuORF	ENST00000261254.7_1_12:4413568-4413715:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	376.1873046755791	4	376.988844	1503.92627	1.447	0.00054552	0.85369	0.00032183	2.3007	0.00086735	377.2401919387606	49.351	0.59334	51.328	51.008	51.601	1.9772					30	18	2	0	0	0	0.14606	1	20622	20622		0.094841	0.011491	1	1227400			23749	5621	11786	11839	27317	27317					0.19446288927247224
NRYRVEARGL	10	Unmodified	_NRYRVEARGL_					0	0	0			REV__ENST00000462617.1_1_6:31604331-31604737:+|nuORF	REV__ENST00000462617.1_1_6:31604331-31604737:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	617.3478271365166	2	617.344178	1232.6738	1.7998	0.0011111	3.9368	0.0024303	5.7366	0.0035414	617.3467796439141	97.176	0.24101	97.176	97.08	97.321	0					13	7	3	0	0	0	0.88022	1	40638	40638		3.5965	0.31518	1	1041500	+		23750	13209	11787	11840	27318	27318					0.06677231126013794
NSGGGGCG	8	Unmodified	_NSGGGGCG_					0	0	0		nc|ENSG00000130224|Q5VUJ6-2|LRCH2;ENSG00000130224|ENST00000317135|LRCH2;AluSp_dup11449|chr4:15667776-15668057:+|2.721539563420573|0.46236865931507|2.56|429.0|11|3|sense	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.3694335818291	1	608.2093	607.202024	2.4963	0.0015183	0.19468	0.00011841	2.691	0.0016367	608.2115318676803	87.238	1.672	87.482	87.385	89.057	0.24387					102	53	2	0	0	0	2.3239	1	36749	36749		0	0	1	835020			23751	2419	11788	11841	27319	27319					-0.11728929167395563
NSGGGGCG	8	Unmodified	_NSGGGGCG_					0	0	0		nc|ENSG00000130224|Q5VUJ6-2|LRCH2;ENSG00000130224|ENST00000317135|LRCH2;AluSp_dup11449|chr4:15667776-15668057:+|2.721539563420573|0.46236865931507|2.56|429.0|11|3|sense	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	607.3702270388603	1	608.2093	607.202024	5.1462	0.0031299	0.60299	0.00036675	5.7492	0.0034967	608.211200734403	87.94	0.44475	88.996	88.859	89.304	1.0562					19	13	2	0	0	0	2.3239	1	37095	37095		0	0	1	480010			23752	2419	11788	11841	27320	27320					-0.11728929167395563
NSGGGGCG	8	Unmodified	_NSGGGGCG_					0	0	0		nc|ENSG00000130224|Q5VUJ6-2|LRCH2;ENSG00000130224|ENST00000317135|LRCH2;AluSp_dup11449|chr4:15667776-15668057:+|2.721539563420573|0.46236865931507|2.56|429.0|11|3|sense	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	nc|ENSG00000130224|Q5VUJ6-2|LRCH2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.8461791872978	1	608.2093	607.202024	4.6749	0.0028433	0.13867	8.434E-05	4.8135	0.0029276	608.2108922101057	88.927	0.3509	90.374	90.179	90.53	1.4467					17	10	2	0	0	0	2.3239	1	37508	37508		0	0	1	385390			23753	2419	11788	11841	27321	27321					-0.11728929167395563
NSHWFWLKWVI	11	Unmodified	_NSHWFWLKWVI_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.9344665408134	3	505.934706	1514.78229	0.14342	7.2561E-05	-0.92005	-0.00046549	-0.77663	-0.00039293	505.9345658143431	13.014	0.28221	13.74	13.6	13.882	0.72639					24	8	4	0	0	0	1.0365	1	5396	5396		1.2148	0	1	3234400			23754	5012	11789	11842	27322	27322					0.045490223764318216
NSHWFWLKWVI	11	Unmodified	_NSHWFWLKWVI_					0	0	0		nc|ENSG00000197506|Q9HAS3-2|SLC28A3;ENSG00000197506|ENST00000376238|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.9359313845634	3	505.934706	1514.78229	0.10382	5.2524E-05	-0.61806	-0.0003127	-0.51424	-0.00026017	505.934703415292	12.761	0.30646	13.549	13.395	13.701	0.78751					26	9	4	0	0	0	1.0391	1	5275	5275		0.40827	0	1	2518400			23755	5012	11789	11842	27323	27323					0.045490223764318216
NSIIPLILLHF	11	Unmodified	_NSIIPLILLHF_					0	0	0		tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2654296755791	3	427.263941	1278.76999	2.3557	0.0010065	0.5594	0.00023901	2.9151	0.0012455	427.26411590084575	40.132	0.73301	41.442	41.086	41.819	1.3102					102	23	5	0	0	0	1.0357	1	16782	16782		1.4551	0.24029	1	54439000			23756	16574	11790	11843	27324	27324					0.14175985913425393
NSIIPLILLHF	11	Unmodified	_NSIIPLILLHF_					0	0	0		tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	tr|A0A553SRR1|A0A553SRR1_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_01505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2648803591728	3	427.263941	1278.76999	1.7969	0.00076775	1.0364	0.0004428	2.8333	0.0012106	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	1.0365	1	16637	16637		1.2148	0	1	44576000			23757	16574	11790	11843	27325	27325					0.14175985913425393
NSLVVTTTK	9	Unmodified	_NSLVVTTTK_					0	0	0		ENST00000506323.1_1_4:101395197-101439143:-|nuORF;nc|ENSG00000164035|Q9ULC0-2|EMCN;nc|ENSG00000164035|Q9ULC0-3|EMCN;ENSG00000164035|ENST00000296420|EMCN	ENST00000506323.1_1_4:101395197-101439143:-|nuORF	ENST00000506323.1_1_4:101395197-101439143:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7808410525322	2	481.779482	961.544411	2.5771	0.0012416	-0.11102	-5.3488E-05	2.466	0.0011881	481.77939262396785	59.772	0.40035	61.192	60.99	61.39	1.4196					37	12	4	0	0	0	0.30098	1	25064	25064		25.399	9.5521	1	39208000			23758	3742	11791	11844	27326	27326					0.06210036723371104
NSLVVTTTK	9	Unmodified	_NSLVVTTTK_					0	0	0		ENST00000506323.1_1_4:101395197-101439143:-|nuORF;nc|ENSG00000164035|Q9ULC0-2|EMCN;nc|ENSG00000164035|Q9ULC0-3|EMCN;ENSG00000164035|ENST00000296420|EMCN	ENST00000506323.1_1_4:101395197-101439143:-|nuORF	ENST00000506323.1_1_4:101395197-101439143:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7807189822197	2	481.779482	961.544411	2.5011	0.001205	-0.42223	-0.00020342	2.0789	0.0010016	481.7791378173942	59.332	0.42888	61.301	61.037	61.466	1.969					31	13	3	0	0	0	0.23535	2	24895	24846;24895		29.082	7.3349	1	17464000			23759	3742	11791	11844	27327;27328	27328					0.06210036723371104
NSNGGCGG	8	Unmodified	_NSNGGCGG_					0	0	0			REV__ENSG00000101446|ENST00000217428|SPINT3	REV__ENSG00000101446|ENST00000217428|SPINT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	333.1182128787041	2	333.11902	664.223487	-2.3115	-0.00077001	0.65721	0.00021893	-1.6543	-0.00055108	333.1193806175504	102.3	0.13401	102.3	102.23	102.37	0					7	4	2	0	0	0	0.89198	1	42882	42882		0	0	1	11924000	+		23760	9036	11792	11845	27329	27329					-0.12205544138669211
NSNVVKVA	8	Unmodified	_NSNVVKVA_					0	0	0		ENST00000469797.5_1_14:75137455-75152321:-|nuORF;nc|ENSG00000119682|O15033-2|AREL1;ENST00000557401.5_1_14:75130603-75152321:-|nuORF;ENSG00000119682|ENST00000356357|AREL1	ENST00000469797.5_1_14:75137455-75152321:-|nuORF	ENST00000469797.5_1_14:75137455-75152321:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	830.4725829958916	1	830.473043	829.465767	2.8679	0.0023817	-3.5936	-0.0029844	-0.72573	-0.0006027	830.47026102948	103.41	0.10884	103.57	103.51	103.62	0.16445					9	4	3	0	0	0	0.89051	1	43588	43588		2.3027	0	1	451050000			23761	2078	11793	11846	27330	27330					0.044212292089468974
NSRKPLRVLVS	11	Unmodified	_NSRKPLRVLVS_					0	0	0		ENST00000517617.1_1_8:68864752-69023167:+|nuORF;nc|ENSG00000046889|Q70Z35-3|PREX2;ENST00000529398.5_1_8:68864629-69017594:+|nuORF;nc|ENSG00000046889|Q70Z35-4|PREX2;ENSG00000046889|ENST00000288368|PREX2	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	ENST00000517617.1_1_8:68864752-69023167:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	634.8949462771416	2	634.893503	1267.77245	2.5937	0.0016467	-0.3381	-0.00021466	2.2556	0.0014321	634.893122609994	94.257	0.50206	94.402	94.165	94.667	0.14493					62	15	5	0	0	0	1.0394	1	39530	39530		0.96228	0.43751	1	18758000			23762	674	11794	11847	27331	27331					0.14927834371087556
NSTCTSHHWK	10	Unmodified	_NSTCTSHHWK_					0	0	0		ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	400.8452331423759	3	400.84534	1199.51419	-1.0656	-0.00042716	1.4255	0.00057141	0.35987	0.00014425	400.84645192342197	10.553	3.8539	10.553	9.4467	13.301	0					253	128	4	0	0	0	0.69361	1	4484	4484		18.721	1.6726	1	4543200			23763	6620	11795	11848	27332	27332					-0.07758645213471027
NSTCTSHHWK	10	Unmodified	_NSTCTSHHWK_					0	0	0		ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	400.8481933474541	3	400.84534	1199.51419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.816	1	12.816	12.316	13.316	0								0	0	0	0.65752	1	5306	5306		7.4771	2.0744	1				23764	6620	11795	11848	27333	27333					-0.07758645213471027
NSTCTSHHWK	10	Unmodified	_NSTCTSHHWK_					0	0	0		ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	400.8445312380791	3	400.84534	1199.51419	0.22999	9.2191E-05	-1.6979	-0.0006806	-1.4679	-0.00058841	400.8448176624449	10.091	1.5827	10.169	9.5203	11.103	0.077971					136	59	3	0	0	0	0.81255	1	4438	4438		10.899	6.0019	1	2124300			23765	6620	11795	11848	27334	27334					-0.07758645213471027
NSTCTSHHWK	10	Unmodified	_NSTCTSHHWK_					0	0	0		ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	400.8440124392509	3	400.84534	1199.51419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.157	1	11.239	10.739	11.739	0.082325								0	0	0	0.65227	1	4629	4629		12.175	2.6308	1				23766	6620	11795	11848	27335	27335					-0.07758645213471027
NSTCTSHHWK	10	Unmodified	_NSTCTSHHWK_					0	0	0		ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	ENST00000452837.6_1_3:9426353-9426413:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	400.84534	1199.51419	-0.81439	-0.00032645	-0.72668	-0.00029129	-1.5411	-0.00061773	400.84526941181105	9.4194	0.22118	10.07	9.9546	10.176	0.65058	-0.049395	0.0010044	NaN	10.899	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	187470			23767	6620	11795	11848							-0.07758645213471027
NSVEMDWVL	9	Unmodified	_NSVEMDWVL_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1092.503588855267	1	1092.50302	1091.49575	2.3191	0.0025336	-0.60146	-0.0006571	1.7176	0.0018765	1092.5019132087118	75.307	0.45841	76.613	76.435	76.894	1.3063					29	14	3	0	0	0	0.015029	2	31582	31582;31639		103.35	55.605	1	2139100			23768	2326	11796	11849	27336;27337	27336					-0.04634199908014125
NSVEMDWVL	9	Unmodified	_NSVEMDWVL_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1092.507739245892	1	1092.50302	1091.49575	2.978	0.0032535	0.048111	5.2562E-05	3.0261	0.003306	1092.5034938210115	74.84	0.37193	76.622	76.45	76.822	1.7817					20	11	3	0	0	0	0.015029	2	31442	31376;31442		103.35	55.605	1	2125700			23769	2326	11796	11849	27338;27339	27339					-0.04634199908014125
NSVEMDWVL	9	Unmodified	_NSVEMDWVL_					0	0	0		ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	ENSG00000126945|ENST00000316594|HNRNPH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7565185427666	2	546.755149	1091.49575	2.7904	0.0015257	-1.1849	-0.00064785	1.6055	0.0008778	546.7542353853512	74.85	0.28023	76.632	76.45	76.73	1.7817					18	8	3	0	0	0	0.04812	1	31399	31399		69.105	46.369	1	2250500			23770	2326	11796	11849	27340	27340					-0.04634199908014125
NSVKNTGNNMR	11	Unmodified	_NSVKNTGNNMR_					0	0	0		tr|A0A7D7A2W1|A0A7D7A2W1_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19185PE=4SV=1	tr|A0A7D7A2W1|A0A7D7A2W1_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19185PE=4SV=1	tr|A0A7D7A2W1|A0A7D7A2W1_9CLOTPhagetailtapemeasureproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19185PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8041869997978	2	617.801485	1233.58842	-0.043193	-2.6685E-05	4.3537	0.0026897	4.3105	0.002663	617.8046877247709	14.923	0.12755	15.82	15.741	15.869	0.89664					5	3	2	0	0	0	0.91385	1	6204	6204		8.9762	0.53194	1	512930			23771	17266	11797	11850	27341	27341					-0.01903302121922934
NSVKQYSGKF	10	Unmodified	_NSVKQYSGKF_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;ENST00000447355.1_1_2:136956686-136956818:-|nuORF	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.3033325076103	2	579.301113	1156.58767	2.669	0.0015462	1.5892	0.00092065	4.2582	0.0024668	579.3013300748761	72.361	0.83295	74.171	73.71	74.543	1.8101					55	26	3	0	0	0	0.6819	1	30363	30363		19.257	0	1	3757300			23772	7914	11798	11851	27342	27342					0.01564226500681798
NSYILFKK	8	Unmodified	_NSYILFKK_					0	0	0		ENSG00000182405|ENST00000397766|PGBD4	ENSG00000182405|ENST00000397766|PGBD4	ENSG00000182405|ENST00000397766|PGBD4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.2633239626884	2	506.794935	1011.57532	0.23801	0.00012062	-2.5662	-0.0013005	-2.3282	-0.0011799	507.29471605850745	13.452	0.12373	14.178	14.1	14.224	0.72639					5	3	2	0	0	0	2.3239	1	5580	5580		4.756	0	1	242080			23773	4615	11799	11852	27343	27343					0.06999234828276713
NSYRCECG	8	Unmodified	_NSYRCECG_					0	0	0		nc|ENSG00000138315|Q8WWZ8-2|OIT3;ENSG00000138315|ENST00000334011|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	MSMS	GG20161007_CRH_Patient100_A02_02	2	466.1763488650322	2	466.173469	930.332386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.83	1	119.88	119.38	120.38	0.041039								0	0	0	1.0178	1	51445	51445		2.5775	0	1				23774	2824	11800	11853	27344	27344					-0.13556701230720591
NSYRCECG	8	Unmodified	_NSYRCECG_					0	0	0		nc|ENSG00000138315|Q8WWZ8-2|OIT3;ENSG00000138315|ENST00000334011|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	MSMS	GG20161007_CRH_Patient100_A02_02	2	466.1755554080009	2	466.173469	930.332386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.98	1	120.02	119.52	120.52	0.041039								0	0	0	1.0178	1	51504	51504		2.5775	0	1				23775	2824	11800	11853	27345	27345					-0.13556701230720591
NSYRCECG	8	Unmodified	_NSYRCECG_					0	0	0		nc|ENSG00000138315|Q8WWZ8-2|OIT3;ENSG00000138315|ENST00000334011|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	nc|ENSG00000138315|Q8WWZ8-2|OIT3	MSMS	GG20161007_CRH_Patient100_W632_01	3	466.1787902712822	2	466.173469	930.332386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.96	1	110.12	109.62	110.62	0.16133								0	0	0	1.0178	1	47769	47769		2.5775	0	1				23776	2824	11800	11853	27346	27346					-0.13556701230720591
NTCCFCWCCC	10	Unmodified	_NTCCFCWCCC_					0	0	0		ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1588622927666	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.22	1	33.498	32.998	33.998	1.2782								0	0	0	0.66243	1	13517	13517		0.35063	0.35063	1				23777	1154	11801	11854	27347	27347					-0.28077549789804834
NTCCFCWCCC	10	Unmodified	_NTCCFCWCCC_					0	0	0		ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1596557497978	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.396	1	33.674	33.174	34.174	1.2782								0	0	0	0.66243	1	13589	13589		0.35063	0.35063	1				23778	1154	11801	11854	27348	27348					-0.28077549789804834
NTCCFCWCCC	10	Unmodified	_NTCCFCWCCC_					0	0	0		ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	ENSG00000091844|ENST00000206262|RGS17	MSMS	GG20161007_CRH_Patient100_W632_01	3	593.1591674685478	2	593.159279	1184.304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.454	1	44.808	44.308	45.308	1.3536								0	0	0	0.66243	1	18218	18218		0.35063	0.35063	1				23779	1154	11801	11854	27349	27349					-0.28077549789804834
NTDTKRDRER	10	Unmodified	_NTDTKRDRER_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882934451103	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.367	1	17.193	16.693	17.693	0.82643								0	0	0	0.66222	1	6804	6804		0.69767	0	1		+		23780	12059	11802	11855	27350	27350					0.010388276701860377
NTDTKVNSIQG	11	Unmodified	_NTDTKVNSIQG_					0	0	0			REV__tr|A0A553SM33|A0A553SM33_NIACISCP-likeextracellularproteinOS=NialliacirculansOX=1397GN=CEQ21_21815PE=4SV=1	REV__tr|A0A553SM33|A0A553SM33_NIACISCP-likeextracellularproteinOS=NialliacirculansOX=1397GN=CEQ21_21815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1176.592700183392	1	1176.58551	1175.57823	3.9281	0.0046218	2.7953	0.003289	6.7235	0.0079107	1176.5882233172886	104.64	0.077744	104.7	104.65	104.72	0.056801					12	3	4	0	0	0	1.0214	1	44172	44172		2.4985	0.65425	1	98875000	+		23781	15005	11803	11856	27351	27351					-0.0025358657551350916
NTIPFIIRY	9	Unmodified	_NTIPFIIRY_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8284179568291	2	568.826766	1135.63898	2.9904	0.001701	-0.010106	-5.7485E-06	2.9803	0.0016953	568.8268978390498	62.732	0.5743	64.146	63.959	64.533	1.4134					46	18	3	0	0	0	0.04145	3	26312	26263;26312;26351		74.929	42.624	1	83391000			23782	836	11804	11857	27352;27353;27354	27353					0.07658595265365875
NTIPFIIRY	9	Unmodified	_NTIPFIIRY_					0	0	0		ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	ENSG00000068784|ENST00000263736|SRBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8284789919853	2	568.826766	1135.63898	3.1736	0.0018052	-1.2257	-0.00069721	1.9479	0.001108	568.8262379778977	62.178	0.70013	64.135	63.719	64.419	1.9571					49	22	3	0	0	0	0.031377	3	26040	26040;26089;26141		85.272	52.486	1	97610000			23783	836	11804	11857	27355;27356;27357	27355					0.07658595265365875
NTKTLAKKLH	10	Unmodified	_NTKTLAKKLH_					0	0	0		tr|A0A7D6VPF3|A0A7D6VPF3_9CLOTRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=sigFPE=3SV=1	tr|A0A7D6VPF3|A0A7D6VPF3_9CLOTRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=sigFPE=3SV=1	tr|A0A7D6VPF3|A0A7D6VPF3_9CLOTRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=sigFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3556396365166	2	577.356222	1152.69789	3.0563	0.0017646	-3.7422	-0.0021606	-0.68586	-0.00039599	577.3544272687388	105.99	0.11869	106.15	106.08	106.2	0.15859					13	5	3	0	0	0	0.88022	1	45270	45270		3.5965	0.31518	1	33851000			23784	16764	11805	11858	27358	27358					0.12765071559692842
NTKTQKIRLL	10	Unmodified	_NTKTQKIRLL_					0	0	0		nc|ENSG00000114487|Q86VD1-2|MORC1;ENSG00000114487|ENST00000232603|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8846923708916	2	607.882604	1213.75066	3.1032	0.0018864	-0.8327	-0.00050618	2.2705	0.0013802	607.8817499779653	107.41	0.19	107.57	107.49	107.68	0.15781					30	9	4	0	0	0	0.89803	1	46179	46179		1.4819	0.15237	1	89702000			23785	1867	11806	11859	27359	27359					0.15233029622504546
NTKTQKIRLL	10	Unmodified	_NTKTQKIRLL_					0	0	0		nc|ENSG00000114487|Q86VD1-2|MORC1;ENSG00000114487|ENST00000232603|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	nc|ENSG00000114487|Q86VD1-2|MORC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8848144412041	2	607.882604	1213.75066	3.233	0.0019653	-0.87174	-0.00052992	2.3613	0.0014354	607.8818158112075	107.41	0.18958	107.57	107.45	107.64	0.15796					28	9	4	0	0	0	0.88022	1	46122	46122		3.5965	1.7523	1	56358000			23786	1867	11806	11859	27360	27360					0.15233029622504546
NTLHPLWT	8	Unmodified	_NTLHPLWT_					0	0	0		ENSG00000174990|ENST00000649794|CA5A	ENSG00000174990|ENST00000649794|CA5A	ENSG00000174990|ENST00000649794|CA5A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	491.7935363650322	2	491.261259	980.507966	1.556	0.00076438	-1.9511	-0.00095848	-0.3951	-0.0001941	491.26062159339523	79.007	0.41945	79.007	78.756	79.175	0					31	13	3	0	0	0	2.3239	1	32825	32825		5.2307	0	1	5461900			23787	4349	11807	11860	27361	27361					0.01693204617322408
NTLKAAAT	8	Unmodified	_NTLKAAAT_					0	0	0			REV__tr|A0A553SKB5|A0A553SKB5_NIACItetrahydrofolatesynthaseOS=NialliacirculansOX=1397GN=CEQ21_18285PE=3SV=1	REV__tr|A0A553SKB5|A0A553SKB5_NIACItetrahydrofolatesynthaseOS=NialliacirculansOX=1397GN=CEQ21_18285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.2256957888603	2	395.226885	788.439217	1.8643	0.0007368	-3.5008	-0.0013836	-1.6366	-0.00064682	395.22525371852765	67.037	0.49307	67.36	67.126	67.619	0.32269					39	16	3	0	0	0	0.89051	2	28062	28062;28107		2.3027	0	1	13356000	+		23788	14944	11808	11861	27362;27363	27362					0.036535403176003456
NTLKAAAT	8	Unmodified	_NTLKAAAT_					0	0	0			REV__tr|A0A553SKB5|A0A553SKB5_NIACItetrahydrofolatesynthaseOS=NialliacirculansOX=1397GN=CEQ21_18285PE=3SV=1	REV__tr|A0A553SKB5|A0A553SKB5_NIACItetrahydrofolatesynthaseOS=NialliacirculansOX=1397GN=CEQ21_18285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.2264587283134	2	395.226885	788.439217	1.5932	0.00062968	-2.1543	-0.00085143	-0.56106	-0.00022175	395.225989778449	65.756	0.51432	67.664	67.344	67.858	1.9085					36	16	3	0	0	0	0.89051	2	27537	27537;27588		2.3027	0	1	6160900	+		23789	14944	11808	11861	27364;27365	27364					0.036535403176003456
NTLLIAGLQAR	11	Unmodified	_NTLLIAGLQAR_					0	0	0		nc|ENSG00000244038|P39656-3|DDOST;ENSG00000244038|ENST00000602624|DDOST;nc|ENSG00000244038|P39656|DDOST;FYTTD1-DDOST|2|fusion;nc|ENSG00000244038|P39656-2|DDOST;FYTTD1-DDOST|1|fusion	nc|ENSG00000244038|P39656-3|DDOST	nc|ENSG00000244038|P39656-3|DDOST	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	390.7337524294853	3	390.571545	1168.69281	2.4502	0.00095698	-0.7239	-0.00028274	1.7263	0.00067425	390.5709180659481	61.268	0.6764	62.686	62.312	62.988	1.4177					29	21	2	0	0	0	0.14606	1	25702	25702		2.2527	0.66045	1	1964200			23790	5360	11809	11862	27366	27366					0.11520767697106749
NTQLNEYTI	9	Unmodified	_NTQLNEYTI_					0	0	0			REV__tr|A0A7D6ZYR3|A0A7D6ZYR3_9CLOTTransglutaminasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17350PE=4SV=1	REV__tr|A0A7D6ZYR3|A0A7D6ZYR3_9CLOTTransglutaminasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17350PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.2708618044853	2	548.269478	1094.5244	0.077188	4.232E-05	0.63003	0.00034542	0.70721	0.00038774	548.2695369382218	35.193	0.18307	36.468	36.37	36.553	1.2746					22	17	2	0	0	0	0.10993	1	14758	14758		46.021	13.715	1	5128100	+		23791	15781	11810	11863	27367	27367					-0.019077590072356543
NTRLTVPR	8	Unmodified	_NTRLTVPR_					0	0	0			REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	REV__NOP2|p.E523Gfs*6|1|0.28|ENSG00000111641|chr12:6560319-6560319|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7858154177666	2	478.785433	955.556313	2.7409	0.0013123	0.18767	8.9854E-05	2.9285	0.0014021	478.78536230666595	73.481	0.52819	75.277	75.039	75.567	1.7962					37	16	3	0	0	0	0.88846	1	30801	30801		3.5965	0.60125	1	3940200	+		23792	9332	11811	11864	27368	27368					0.07675698257230579
NTRSSSGS	8	Unmodified	_NTRSSSGS_					0	0	0			REV__nc|ENSG00000173706|Q9ULI3-2|HEG1	REV__nc|ENSG00000173706|Q9ULI3-2|HEG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	795.3597289919853	1	795.359135	794.351859	1.2893	0.0010255	0.91344	0.00072651	2.2028	0.001752	795.3596697095627	104.67	0.078102	104.67	104.62	104.7	0					9	3	3	0	0	0	0.89176	1	44237	44237		0.79363	0	1	25000000	+		23793	11108	11812	11865	27369	27369					-0.053542856239232606
NTRWRGRRRKR	11	Unmodified	_NTRWRGRRRKR_					0	0	0		ENST00000238714.7_1_2:60983533-60983617:+|nuORF	ENST00000238714.7_1_2:60983533-60983617:+|nuORF	ENST00000238714.7_1_2:60983533-60983617:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	771.1400634646416	2	771.459065	1540.90358	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.035	1	98.262	97.762	98.762	0.22776								0	0	0	0.63775	1	41259	41259		2.086	1.0145	1				23794	5561	11813	11866	27370	27370					0.15476082582335948
NTTMIMKVR	9	Unmodified	_NTTMIMKVR_					0	0	0			REV__ENST00000216407.4_1_12:68867655-68868498:+|nuORF	REV__ENST00000216407.4_1_12:68867655-68868498:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1094.244677722454	1	1093.58565	1092.57837	0.76014	0.00083128	-2.1259	-0.0023249	-1.3658	-0.0014936	1094.5828326113647	55.629	0.098343	57.598	57.543	57.641	1.9684					6	4	2	0	0	0	0.11749	1	23323	23323		6.7232	0.96273	1	3600600	+		23795	12070	11814	11867	27371	27371					0.03578418619144941
NTVKELLPVL	10	Unmodified	_NTVKELLPVL_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|2|fusion;VCL|p.R832Efs*23|1|0.05|ENSG00000035403|chr10:74107288-74107288|C/-|frameshift_variant;nc|ENSG00000035403|P18206-2|VCL;ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-3|VCL	VCL-ADK|12|fusion	VCL-ADK|12|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3489868044853	2	563.347532	1124.68051	1.7514	0.00098663	0.90811	0.00051158	2.6595	0.0014982	563.348041336827	62.371	0.31087	62.371	62.211	62.522	0					20	9	3	0	0	0	0.60583	1	26003	26003		22.736	5.6234	1	1461100			23796	17352	11815	11868	27372	27372					0.12315731234048144
NTVKELLPVL	10	Unmodified	_NTVKELLPVL_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|2|fusion;VCL|p.R832Efs*23|1|0.05|ENSG00000035403|chr10:74107288-74107288|C/-|frameshift_variant;nc|ENSG00000035403|P18206-2|VCL;ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-3|VCL	VCL-ADK|12|fusion	VCL-ADK|12|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3492309451103	2	563.347532	1124.68051	3.3072	0.0018631	0.5455	0.0003073	3.8527	0.0021704	563.3474022422407	60.684	0.31584	62.104	61.933	62.249	1.4196					23	9	3	0	0	0	0.52861	1	25473	25473		26.268	5.8536	1	3315900			23797	17352	11815	11868	27373	27373					0.12315731234048144
NTVKELLPVL	10	Unmodified	_NTVKELLPVL_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|2|fusion;VCL|p.R832Efs*23|1|0.05|ENSG00000035403|chr10:74107288-74107288|C/-|frameshift_variant;nc|ENSG00000035403|P18206-2|VCL;ENSG00000035403|ENST00000211998|VCL;nc|ENSG00000035403|P18206-3|VCL	VCL-ADK|12|fusion	VCL-ADK|12|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3502075076103	2	563.347532	1124.68051	3.194	0.0017993	0.91251	0.00051406	4.1065	0.0023134	563.3475914452375	60.155	0.28366	62.12	61.977	62.26	1.9653					20	8	3	0	0	0	0.47063	1	25227	25227		29.082	3.6823	1	3692200			23798	17352	11815	11868	27374	27374					0.12315731234048144
NTWDCGLQILK	11	Unmodified	_NTWDCGLQILK_					0	0	0		ENSG00000100075|ENST00000215882|SLC25A1	ENSG00000100075|ENST00000215882|SLC25A1	ENSG00000100075|ENST00000215882|SLC25A1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8878967165947	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.32	1	111.32	110.82	111.82	0								0	0	0	0.63775	1	48148	48148		0.094841	0	1				23799	1235	11816	11869	27375	27375					0.010571113458127002
NVAVREALE	9	Unmodified	_NVAVREALE_					0	0	0		nc|ENSG00000130589|Q9BYK8-2|HELZ2;ENSG00000130589|ENST00000467148|HELZ2;nc|ENSG00000130589|Q9BYK8|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	nc|ENSG00000130589|Q9BYK8-2|HELZ2	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1864196658134	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.047	1	74.858	74.358	75.358	1.8101								0	0	0	0.42693	1	30643	30643		1.1933	0	1				23800	2443	11817	11870	27376	27376					0.035122684378507074
NVDSLITRL	9	Unmodified	_NVDSLITRL_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion;PPP1CB-PLB1|1|fusion;PPP1CB-PLB1|2|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7980224490166	2	515.798206	1029.58186	0.98585	0.0005085	-0.86511	-0.00044622	0.12074	6.2277E-05	515.7975251033783	51.459	0.47978	52.853	52.558	53.038	1.3938					31	15	3	0	0	0	0.0051116	1	21550	21550		121.53	52.429	1	7332900			23801	5225;8062	11818	11871	27377	27377					0.06825127988986424
NVDSLITRL	9	Unmodified	_NVDSLITRL_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion;PPP1CB-PLB1|1|fusion;PPP1CB-PLB1|2|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7989379763603	2	515.798206	1029.58186	0.18681	9.6355E-05	0.28021	0.00014453	0.46701	0.00024089	515.7981971362676	50.828	0.35	52.803	52.636	52.986	1.9753					26	11	3	0	0	0	0.019071	1	21314	21314		100.09	42.369	1	6120000			23802	5225;8062	11818	11871	27378	27378					0.06825127988986424
NVEEITQI	8	Unmodified	_NVEEITQI_					0	0	0		nc|ENSG00000185842|Q0VDD8|DNAH14;nc|ENSG00000185842|Q0VDD8-4|DNAH14;ENSG00000185842|ENST00000682510|DNAH14	nc|ENSG00000185842|Q0VDD8|DNAH14	nc|ENSG00000185842|Q0VDD8|DNAH14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	473.2962219119072	2	473.248015	944.481476	2.1405	0.001013	-1.3135	-0.00062162	0.82696	0.00039136	473.2474713840717	48.82	0.40184	50.797	50.576	50.978	1.9772					17	12	2	0	0	0	2.3239	1	20382	20382		3.9444	0	1	1456200			23803	4765	11819	11872	27379	27379					0.007014709353256876
NVELALSLI	9	Unmodified	_NVELALSLI_					0	0	0		tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	971.5771972537041	1	971.577174	970.569897	1.5692	0.0015246	-0.7843	-0.00076201	0.78491	0.0007626	971.576188826175	70.674	0.46284	70.674	70.477	70.94	0					38	14	4	0	0	0	0.040497	2	29478	29374;29478		75.761	1.8899	1	8818000			23804	16908	11820	11873	27380;27381	27381					0.08343511245811897
NVELALSLI	9	Unmodified	_NVELALSLI_					0	0	0		tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	971.5768310427666	1	971.577174	970.569897	1.2545	0.0012188	-1.3772	-0.0013381	-0.12271	-0.00011923	971.5756699117125	70.167	0.5117	70.489	70.288	70.799	0.32224					37	16	3	0	0	0	0.024001	3	29383	29339;29383;29436		96.111	8.7399	1	14065000			23805	16908	11820	11873	27382;27383;27384	27383					0.08343511245811897
NVELALSLI	9	Unmodified	_NVELALSLI_					0	0	0		tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5786010622978	1	971.577174	970.569897	1.6393	0.0015927	0.22398	0.00021761	1.8633	0.0018103	971.5773924745769	69.121	0.53832	70.486	70.22	70.758	1.3657					40	17	3	0	0	0	0.031145	1	29043	29043		85.642	0	1	26375000			23806	16908	11820	11873	27385	27385					0.08343511245811897
NVELALSLI	9	Unmodified	_NVELALSLI_					0	0	0		tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	tr|A0A7D6VT99|A0A7D6VT99_9CLOTCotSfamilysporecoatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	971.5788452029228	1	971.577174	970.569897	1.4902	0.0014478	-0.031195	-3.0308E-05	1.459	0.0014175	971.5770584967681	68.629	0.49457	70.482	70.185	70.679	1.853					36	15	3	0	0	0	0.031145	3	28769	28721;28769;28820		85.642	0	1	18189000			23807	16908	11820	11873	27386;27387;27388	27387					0.08343511245811897
NVFMYCMLFFM	11	Unmodified	_NVFMYCMLFFM_					0	0	0			REV__ENSG00000124140|ENST00000243964|SLC12A5	REV__ENSG00000124140|ENST00000243964|SLC12A5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	481.9357787966728	3	482.542336	1444.60518	0.91737	0.00044267	2.0391	0.00098394	2.9564	0.0014266	482.5432113588747	11.514	0.12321	11.596	11.519	11.642	0.082325					6	3	2	0	0	0	0.14606	1	4756	4756		0.45452	0.37117	1	430290	+		23808	9632	11821	11874	27389	27389					-0.09933976876232009
NVFMYCMLFFM	11	Unmodified	_NVFMYCMLFFM_					0	0	0			REV__ENSG00000124140|ENST00000243964|SLC12A5	REV__ENSG00000124140|ENST00000243964|SLC12A5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	482.542336	1444.60518	0.59615	0.00028767	1.6093	0.00077656	2.2055	0.0010642	482.5436120102163	11.499	0.64648	11.499	11.171	11.818	0	-0.0484	-0.00020674	NaN	0.45452	47	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6308900	+		23809	9632	11821	11874							-0.09933976876232009
NVIAIFFLI	9	Unmodified	_NVIAIFFLI_					0	0	0		tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3267089724541	2	525.323328	1048.6321	2.2484	0.0011812	3.2762	0.0017211	5.5246	0.0029022	525.3253053235943	91.983	0.40959	91.983	91.693	92.103	0					26	12	3	0	0	0	0.76456	1	38408	38408		4.756	0	1	1911000			23810	17048	11822	11875	27390	27390					0.1097328238481623
NVIAIFFLI	9	Unmodified	_NVIAIFFLI_					0	0	0		tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	525.323328	1048.6321	2.8271	0.0014852	2.7262	0.0014321	5.5533	0.0029173	525.3246864757799	91.773	0.38869	91.963	91.755	92.144	0.19041	-0.051753	-0.00020475	NaN	4.756	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1688600			23811	17048	11822	11875							0.1097328238481623
NVIAIFFLI	9	Unmodified	_NVIAIFFLI_					0	0	0		tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	525.323328	1048.6321	4.1958	0.0022041	3.6535	0.0019192	7.8493	0.0041234	525.3255623656855	91.048	0.28745	92.03	91.846	92.133	0.98157	0.014748	0.00076948	NaN	4.756	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	877610			23812	17048	11822	11875							0.1097328238481623
NVIAIFFLI	9	Unmodified	_NVIAIFFLI_					0	0	0		tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	tr|A0A7D6W494|A0A7D6W494_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19805PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	525.323328	1048.6321	3.7838	0.0019877	1.628	0.00085521	5.4117	0.0028429	525.3238158728581	90.719	0.35205	92.084	91.897	92.249	1.366	0.069317	-0.0013586	NaN	4.756	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1266400			23813	17048	11822	11875							0.1097328238481623
NVIEALRENA	10	Unmodified	_NVIEALRENA_					0	0	0		chr18:34558135-34679468|177|13.19|0.37|5.14|+|ENST00000590598|DTNA,DTNA;nc|ENSG00000134769|Q9Y4J8-12|DTNA;nc|ENSG00000134769|Q9Y4J8-9|DTNA;nc|ENSG00000134769|Q9Y4J8-7|DTNA;nc|ENSG00000134769|Q9Y4J8-16|DTNA;nc|ENSG00000134769|Q9Y4J8-5|DTNA;nc|ENSG00000134769|Q9Y4J8-4|DTNA;nc|ENSG00000134769|Q9Y4J8-3|DTNA;nc|ENSG00000134769|Q9Y4J8-13|DTNA;nc|ENSG00000134769|Q9Y4J8-2|DTNA;nc|ENSG00000134769|Q9Y4J8-14|DTNA;nc|ENSG00000134769|Q9Y4J8-15|DTNA;nc|ENSG00000134769|Q9Y4J8|DTNA;ENSG00000134769|ENST00000444659|DTNA	chr18:34558135-34679468|177|13.19|0.37|5.14|+|ENST00000590598|DTNA,DTNA	chr18:34558135-34679468|177|13.19|0.37|5.14|+|ENST00000590598|DTNA,DTNA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.8050414919853	2	564.80402	1127.59349	0.85406	0.00048237	4.0306	0.0022765	4.8846	0.0027589	564.8060014578086	101.24	0.11237	101.24	101.2	101.32	0					6	3	2	0	0	0	0.89039	1	42404	42404		2.4985	0.43874	1	5053000			23814	221	11823	11876	27391	27391					0.03479325012335721
NVIKDAMHVD	10	Unmodified	_NVIKDAMHVD_					0	0	0			REV__tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	REV__tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	570.4583618044853	2	571.287148	1140.55974	2.6372	0.0015066	-3.235	-0.0018481	-0.59775	-0.00034149	571.2862097406531	108.49	0.15508	108.54	108.44	108.6	0.050644					20	9	3	0	0	0	0.12557	1	46592	46592		1.3295	0.13619	1	19749000	+		23815	15351	11824	11877	27392	27392					-0.004914197510970553
NVIMWWESLL	10	Unmodified	_NVIMWWESLL_					0	0	0		SLC24A2|p.E319Lfs*25|1|0.07|ENSG00000155886|chr9:19622276-19622277|-/AG|frameshift_variant;SLC24A2|p.S531Rfs*7|1|0.08|ENSG00000155886|chr9:19521037-19521037|A/-|frameshift_variant;nc|ENSG00000155886|Q9UI40-2|SLC24A2;ENSG00000155886|ENST00000341998|SLC24A2	SLC24A2|p.E319Lfs*25|1|0.07|ENSG00000155886|chr9:19622276-19622277|-/AG|frameshift_variant	SLC24A2|p.E319Lfs*25|1|0.07|ENSG00000155886|chr9:19622276-19622277|-/AG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.45	1	30.225	29.725	30.725	1.7754								0	0	0	0.66255	1	11913	11913		0.13989	0.017027	1				23816	3431	11825	11878	27393	27393					0.014592008395311495
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8842040896416	2	641.881793	1281.74903	2.0667	0.0013266	0.92569	0.00059419	2.9924	0.0019208	641.8822617428297	78.111	0.63029	78.111	77.811	78.441	0					31	19	2	0	0	0	1.0366	1	32620	32620		1.1933	0.59184	1	1347600			23817	2514	11826	11879	27394	27394					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8831664919853	2	641.881793	1281.74903	2.0424	0.001311	1.3754	0.00088287	3.4178	0.0021938	641.8826590024304	79.226	1.0114	79.226	78.907	79.918	0					92	32	3	0	0	0	1.0366	1	33042	33042		1.1933	0.12188	1	2934400			23818	2514	11826	11879	27395	27395					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8827392458916	2	641.881793	1281.74903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.518	1	82.518	82.018	83.018	0								0	0	0	0.63775	1	34377	34377		1.1933	0	1				23819	2514	11826	11879	27396	27396					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8841430544853	2	641.881793	1281.74903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.758	1	82.758	82.258	83.258	0								0	0	0	0.63775	1	34479	34479		1.1933	0	1				23820	2514	11826	11879	27397	27397					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8826171755791	2	641.881793	1281.74903	1.6317	0.0010473	1.7364	0.0011146	3.3681	0.0021619	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	1.0366	4	32971	32971;33077;33127;33181		1.1933	0.12188	1	3189400			23821	2514	11826	11879	27398;27399;27400;27401	27398					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8834716677666	2	641.881793	1281.74903	1.9822	0.0012723	0.78116	0.00050141	2.7633	0.0017737	641.8820510835203	81.341	2.8576	81.632	80.778	83.635	0.29056					269	92	4	0	0	0	1.0366	3	34414	34414;34467;34517		1.1933	0.59184	1	11140000			23822	2514	11826	11879	27402;27403;27404	27402					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8826782107353	2	641.881793	1281.74903	2.4082	0.0015458	1.3503	0.0008667	3.7584	0.0024125	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	1.0366	2	34357	34357;34404		1.1933	0.59184	1	10623000			23823	2514	11826	11879	27405;27406	27405					0.11942833377111128
NVIQRRGRAGR	11	Unmodified	_NVIQRRGRAGR_					0	0	0		nc|ENSG00000132153|Q7L2E3-3|DHX30;ENSG00000132153|ENST00000445061|DHX30;nc|ENSG00000132153|Q7L2E3-2|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	nc|ENSG00000132153|Q7L2E3-3|DHX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8839599490166	2	641.881793	1281.74903	1.4587	0.0009363	1.8322	0.001176	3.2908	0.0021123	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0174	1	33845	33845		2.7352	1.4057	1	9116700			23824	2514	11826	11879	27407	27407					0.11942833377111128
NVISVRLFKR	10	Unmodified	_NVISVRLFKR_					0	0	0		nc|ENSG00000089250|P29475-4|NOS1;nc|ENSG00000089250|P29475-2|NOS1;ENSG00000089250|ENST00000317775|NOS1;nc|ENSG00000089250|P29475-5|NOS1	nc|ENSG00000089250|P29475-4|NOS1	nc|ENSG00000089250|P29475-4|NOS1	MSMS	GG20161007_CRH_Patient100_A02_01	1	616.3860961794853	2	616.385314	1230.75608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.226	1	47.226	46.726	47.726	0								0	0	0	0.66087	1	19734	19734		2.9952	0	1				23825	1123	11827	11880	27408	27408					0.14992753204978726
NVIVIFFIEFI	11	Unmodified	_NVIVIFFIEFI_					0	0	0		ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2705566287041	3	451.93208	1352.77441	2.2031	0.00099564	2.6853	0.0012136	4.8884	0.0022092	451.9339659476487	83.295	1.2912	83.295	82.585	83.876	0					71	41	3	0	0	0	1.0366	1	34888	34888		0.40827	0.078994	1	1149800			23826	4112	11828	11881	27409	27409					0.1121345033632224
NVIVIFFIEFI	11	Unmodified	_NVIVIFFIEFI_					0	0	0		ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3967773318291	2	677.394482	1352.77441	2.753	0.0018649	0.99713	0.00067545	3.7502	0.0025404	677.3951051592902	85.403	1.3251	85.403	84.589	85.914	0					130	41	4	0	0	0	1.0366	1	35598	35598		1.1933	0.735	1	4030800			23827	4112	11828	11881	27410	27410					0.1121345033632224
NVIVIFFIEFI	11	Unmodified	_NVIVIFFIEFI_					0	0	0		ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	ENSG00000169777|ENST00000382492|TAS2R1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3979369997978	2	677.394482	1352.77441	2.8728	0.001946	0.22755	0.00015414	3.1003	0.0021001	677.3943835412952	86.11	0.7575	86.11	85.884	86.641	0					57	24	3	0	0	0	1.0366	1	35969	35969		1.1933	0.79263	1	1252200			23828	4112	11828	11881	27411	27411					0.1121345033632224
NVKEVWKKR	9	Unmodified	_NVKEVWKKR_					0	0	0			REV__tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	REV__tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	593.1594726443291	2	593.85639	1185.69823	1.5675	0.00093088	0.61946	0.00036787	2.187	0.0012987	593.8561133687956	40.211	0.31476	40.524	40.35	40.665	0.31263					14	9	2	0	0	0	0.11908	1	16853	16853		2.0598	0.21551	1	1098300	+		23829	15416	11829	11882	27412	27412					0.11280491279558191
NVKEVWKKR	9	Unmodified	_NVKEVWKKR_					0	0	0			REV__tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	REV__tr|A0A7D6VRN8|A0A7D6VRN8_9CLOTWingedhelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07645PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	593.85639	1185.69823	1.9804	0.0011761	-0.93582	-0.00055574	1.0446	0.00062032	593.8558345638646	40.715	0.18534	40.715	40.642	40.827	0	0.095421	-0.00044075	NaN	2.0598	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	883710	+		23830	15416	11829	11882							0.11280491279558191
NVKFDVNFDK	10	Unmodified	_NVKFDVNFDK_					0	0	0		tr|A0A553SGU9|A0A553SGU9_NIACIOutermembranelipoproteincarrierproteinLolAOS=NialliacirculansOX=1397GN=CEQ21_11600PE=4SV=1	tr|A0A553SGU9|A0A553SGU9_NIACIOutermembranelipoproteincarrierproteinLolAOS=NialliacirculansOX=1397GN=CEQ21_11600PE=4SV=1	tr|A0A553SGU9|A0A553SGU9_NIACIOutermembranelipoproteincarrierproteinLolAOS=NialliacirculansOX=1397GN=CEQ21_11600PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.2102844119072	3	409.211906	1224.61389	0.13945	5.7066E-05	-2.4207	-0.00099058	-2.2812	-0.00093351	409.21055419273927	15.314	0.23396	16.23	16.101	16.335	0.91639					17	7	3	0	0	0	0.82019	1	6337	6337		5.7834	0.73591	1	1242500			23831	16123	11830	11883	27413	27413					0.010564956721282215
NVKVDPEIQ	9	Unmodified	_NVKVDPEIQ_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.2833740115166	2	521.282389	1040.55022	1.1493	0.00059911	1.252	0.00065264	2.4013	0.0012517	521.2830284644198	21.798	0.24879	21.798	21.656	21.905	0					19	7	3	0	0	0	0.066197	1	9055	9055		61.602	28.816	1	3420900		+	23832	351	11831	11884	27414	27414					0.031571352350511006
NVKVDPEIQ	9	Unmodified	_NVKVDPEIQ_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.2830688357353	2	521.282389	1040.55022	0.83394	0.00043472	0.7971	0.00041551	1.631	0.00085023	521.2827199599612	21.512	0.30002	21.735	21.601	21.901	0.223					23	9	3	0	0	0	0.046715	2	8976	8927;8976		70.332	14.155	1	3110900		+	23833	351	11831	11884	27415;27416	27416					0.031571352350511006
NVKVDPEIQ	9	Unmodified	_NVKVDPEIQ_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	521.282389	1040.55022	1.0444	0.00054441	0.75118	0.00039158	1.7955	0.00093598	521.2826377812481	20.693	0.18431	21.818	21.712	21.896	1.1254	0.038349	-0.00014519	NaN	70.332	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660720		+	23834	351	11831	11884							0.031571352350511006
NVKVDPEIQ	9	Unmodified	_NVKVDPEIQ_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	521.282389	1040.55022	0.39296	0.00020484	0.65787	0.00034293	1.0508	0.00054778	521.2823456949584	20.195	0.21333	21.769	21.639	21.852	1.5748	-0.010663	-0.00024248	NaN	70.332	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567320		+	23835	351	11831	11884							0.031571352350511006
NVLKLLGK	8	Unmodified	_NVLKLLGK_					0	0	0		MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant;MDN1|p.N5282Ifs*9|1|0.04|ENSG00000112159|chr6:89652262-89652263|-/GATTTTTCTGCCAACTA|frameshift_variant;MDN1|p.I5359Kfs*8|1|0.1|ENSG00000112159|chr6:89650154-89650155|-/CATAGCT|frameshift_variant;ENSG00000112159|ENST00000369393|MDN1	MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.8011047244072	2	442.80002	883.585488	0.9106	0.00040321	2.6379	0.0011681	3.5485	0.0015713	442.801166571191	106.22	0.17194	106.22	106.13	106.31	0					22	8	3	0	0	0	0.89178	1	45256	45256		0.69038	0	1	128860000			23836	1768	11832	11885	27417	27417					0.1390384255353183
NVLKSIINVYF	11	Unmodified	_NVLKSIINVYF_					0	0	0		ENST00000378535.4_1_12:88888944-88889016:-|nuORF	ENST00000378535.4_1_12:88888944-88889016:-|nuORF	ENST00000378535.4_1_12:88888944-88889016:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1950866580009	4	328.19332	1308.74417	0.26945	8.8433E-05	2.3535	0.00077239	2.6229	0.00086082	328.1946618368283	31.792	0.69321	33.616	33.155	33.848	1.8246					54	25	5	0	0	0	1.0388	1	13401	13401		0.50596	0	1	4626500			23837	6204	11833	11886	27418	27418					0.10215091671148002
NVLLLRQLQEQ	11	Unmodified	_NVLLLRQLQEQ_					0	0	0			REV__ENSG00000167705|ENST00000301336|RILP	REV__ENSG00000167705|ENST00000301336|RILP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9336730837822	3	451.933143	1352.7776	3.1235	0.0014116	-0.41151	-0.00018597	2.712	0.0012256	451.9330334707084	85.264	1.3791	85.516	84.814	86.193	0.25227					106	43	3	0	0	0	1.0395	1	35587	35587		0.08335	0	1	3258700	+		23838	10876	11834	11887	27419	27419					0.11532093443042868
NVLMKPTVV	9	Unmodified	_NVLMKPTVV_					0	0	0			REV__OR5T1|p.F190*|1|0.16|ENSG00000181698|chr11:56276206-56276210|TTTTG/-|frameshift_variant	REV__OR5T1|p.F190*|1|0.16|ENSG00000181698|chr11:56276206-56276210|TTTTG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7985107302666	2	500.79662	999.578688	2.565	0.0012845	2.2531	0.0011283	4.8181	0.0024129	500.79742353163886	77.43	0.40853	77.747	77.511	77.92	0.31653					32	12	3	0	0	0	0.83753	1	32334	32334		1.8442	0	1	4512000	+		23839	11068	11835	11888	27420	27420					0.07888161610651423
NVLQIVTV	8	Unmodified	_NVLQIVTV_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2735168337822	2	443.273835	884.533118	1.9507	0.00086467	-2.5034	-0.0011097	-0.5528	-0.00024504	443.27258903239255	68.914	0.59289	69.237	68.876	69.469	0.32223					48	18	4	0	0	0	0.8873	1	28810	28810		4.3292	0.38484	1	10679000	+		23840	10776	11836	11889	27421	27421					0.08623259419903206
NVLRRDLKPQ	10	Unmodified	_NVLRRDLKPQ_					0	0	0		ENST00000442838.2_1_8:123781530-123781986:+|nuORF	ENST00000442838.2_1_8:123781530-123781986:+|nuORF	ENST00000442838.2_1_8:123781530-123781986:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8707763552666	2	619.870028	1237.7255	2.1274	0.0013187	-1.3015	-0.00080677	0.8259	0.00051195	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	0.89803	1	32185	32185		1.4819	0	1	3039400			23841	6569	11837	11890	27422	27422					0.11614974819917734
NVLSSKLI	8	Unmodified	_NVLSSKLI_					0	0	0			REV__ENSG00000162998|ENST00000295113|FRZB	REV__ENSG00000162998|ENST00000295113|FRZB	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	437.2588989138603	2	437.273835	872.533118	2.7092	0.0011846	1.7518	0.000766	4.4609	0.0019506	437.27608590643416	82.929	0.15396	83.199	83.152	83.306	0.27029					6	4	2	0	0	0	2.3239	1	34680	34680		2.0598	0	1	502130	+		23842	10669	11838	11891	27423	27423					0.09175259419919257
NVLYKDNKF	9	Unmodified	_NVLYKDNKF_					0	0	0			REV__nc|ENSG00000115977|Q2M2I8-2|AAK1	REV__nc|ENSG00000115977|Q2M2I8-2|AAK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8017455935478	2	570.806031	1139.59751	3.0385	0.0017344	-4.3878	-0.0025046	-1.3493	-0.0007702	570.8049926971729	73.987	0.64165	75.783	75.44	76.082	1.7962					67	20	5	0	0	0	0.39927	1	31102	31102		20.454	3.5113	1	10227000	+		23843	14414	11839	11892	27424	27424					0.0332941450603812
NVPGGVVW	8	Unmodified	_NVPGGVVW_					0	0	0			REV__tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	REV__tr|A0A553SFF1|A0A553SFF1_NIACIGluconokinaseOS=NialliacirculansOX=1397GN=gntKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	827.4447509646416	1	827.441015	826.433738	2.99	0.0024741	-4.0749	-0.0033717	-1.0849	-0.00089768	827.4377955525833	104.62	0.30543	104.8	104.58	104.88	0.1731					27	15	2	0	0	0	0.89008	1	44246	44246		2.5775	0.27475	1	22791000	+		23844	14706	11840	11893	27425	27425					0.013578615257983984
NVSEDMREL	9	Unmodified	_NVSEDMREL_					0	0	0			REV__nc|ENSG00000089234|Q7Z569-2|BRAP	REV__nc|ENSG00000089234|Q7Z569-2|BRAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7557861208916	2	546.753138	1091.49172	2.3303	0.0012741	0.105	5.7408E-05	2.4353	0.0013315	546.7531590908412	75.572	0.64516	76.878	76.435	77.08	1.3063					59	20	4	0	0	0	0.20671	1	31613	31613		32.305	9.5692	1	5995900	+		23845	8883	11841	11894	27426	27426					-0.05036289401732574
NVSNVNLTL	9	Unmodified	_NVSNVNLTL_					0	0	0		ENSG00000140396|ENST00000452400|NCOA2;ENST00000518287.6_1_8:71025838-71050550:-|nuORF	ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2691833376884	2	487.269281	972.52401	1.9128	0.00093204	-2.1966	-0.0010703	-0.28382	-0.0001383	487.26834034997836	48.055	0.25361	49.443	49.365	49.618	1.388					12	7	2	0	0	0	0.61249	1	20111	20111		10.824	2.9138	1	1074200			23846	2913	11842	11895	27427	27427					0.03664866063570571
NVSNVNLTL	9	Unmodified	_NVSNVNLTL_					0	0	0		ENSG00000140396|ENST00000452400|NCOA2;ENST00000518287.6_1_8:71025838-71050550:-|nuORF	ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	973.5330078005791	1	973.531286	972.52401	1.6383	0.0015949	-0.29163	-0.00028391	1.3466	0.001311	973.5310867762408	48.13	0.28506	49.518	49.365	49.65	1.388					13	8	2	0	0	0	0.070055	2	20125	20125;20177		60.074	18.234	1	821720			23847	2913	11842	11895	27428;27429	27428					0.03664866063570571
NVSNVNLTL	9	Unmodified	_NVSNVNLTL_					0	0	0		ENSG00000140396|ENST00000452400|NCOA2;ENST00000518287.6_1_8:71025838-71050550:-|nuORF	ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2699462771416	2	487.269281	972.52401	2.5282	0.0012319	-1.5885	-0.00077402	0.93966	0.00045787	487.2682390878489	47.689	0.247	49.665	49.466	49.713	1.976					12	7	2	0	0	0	0.04812	2	19937	19937;19978		69.105	27.265	1	1437300			23848	2913	11842	11895	27430;27431	27430					0.03664866063570571
NVSNVNLTL	9	Unmodified	_NVSNVNLTL_					0	0	0		ENSG00000140396|ENST00000452400|NCOA2;ENST00000518287.6_1_8:71025838-71050550:-|nuORF	ENSG00000140396|ENST00000452400|NCOA2	ENSG00000140396|ENST00000452400|NCOA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	973.5355102419853	1	973.531286	972.52401	2.3094	0.0022483	-0.13439	-0.00013083	2.1751	0.0021175	973.5308389494478	47.627	0.247	49.603	49.466	49.713	1.976					11	7	2	0	0	0	0.053939	1	19946	19946		66.457	26.499	1	786750			23849	2913	11842	11895	27432	27432					0.03664866063570571
NVSVYYIF	8	Unmodified	_NVSVYYIF_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1004.510974109173	1	1004.50876	1003.50148	2.1857	0.0021955	0.056664	5.692E-05	2.2423	0.0022525	1004.5080431199373	67.479	0.43219	68.857	68.603	69.035	1.3778					32	13	3	0	0	0	0.22866	1	28301	28301		78.149	3.7531	1	7102200	+		23850	10466	11843	11896	27433	27433					-0.00012733334040149202
NVSVYYIF	8	Unmodified	_NVSVYYIF_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1004.509936511517	1	1004.50876	1003.50148	1.514	0.0015209	0.274	0.00027524	1.788	0.0017961	1004.5084472138682	67.019	0.4026	68.908	68.646	69.048	1.8889					31	12	3	0	0	0	0.33907	2	28056	28056;28147		68.081	5.1032	1	9501100	+		23851	10466	11843	11896	27434;27435	27434					-0.00012733334040149202
NVTQQSLLL	9	Unmodified	_NVTQQSLLL_					0	0	0		ENST00000513371.1_1_4:128886637-128887203:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	ENST00000513371.1_1_4:128886637-128887203:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2949706912041	2	508.292756	1014.57096	1.9592	0.00099584	1.1201	0.00056936	3.0793	0.0015652	508.29370394793216	54.82	0.26887	56.225	56.06	56.328	1.4048					14	8	2	0	0	0	0.44512	1	22956	22956		18.146	0	1	2192700			23852	7045	11844	11897	27436	27436					0.06425725614735711
NVTRKKRHAR	10	Unmodified	_NVTRKKRHAR_					0	0	0		tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1957275271416	4	317.196994	1264.75887	-0.84596	-0.00026834	-2.4576	-0.00077955	-3.3036	-0.0010479	317.19607346253804	34.372	0.36042	35.647	35.493	35.853	1.2746					86	42	3	0	0	0	0.86984	1	14443	14443		4.7159	0.87001	1	44543000			23853	16142	11845	11898	27437	27437					0.13708021382512925
NVTRKKRHAR	10	Unmodified	_NVTRKKRHAR_					0	0	0		tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	tr|A0A553SH98|A0A553SH98_NIACILargeribosomalsubunitproteinuL18OS=NialliacirculansOX=1397GN=rplRPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	317.196994	1264.75887	0.14392	4.5652E-05	-3.7484	-0.001189	-3.6045	-0.0011433	317.1957169498615	33.838	0.32571	35.661	35.601	35.927	1.8227	0.0069387	-0.00071978	NaN	4.7159	93	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51402000			23854	16142	11845	11898							0.13708021382512925
NVVEALIAL	9	Unmodified	_NVVEALIAL_					0	0	0		ENST00000458412.1_2_15:44093902-44094001:+|nuORF;ENSG00000242028|ENST00000442995|HYPK	ENST00000458412.1_2_15:44093902-44094001:+|nuORF	ENST00000458412.1_2_15:44093902-44094001:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	941.5695068240166	1	941.566609	940.559333	1.5935	0.0015004	1.0674	0.0010051	2.661	0.0025055	941.5662648141482	84.33	0.25032	85.489	85.372	85.622	1.159					10	7	2	0	0	0	0.093059	1	35380	35380		51.63	9.7902	1	994820			23855	5342	11846	11899	27438	27438					0.0866752859137705
NVVLVQHQI	9	Unmodified	_NVVLVQHQI_					0	0	0			REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	REV__nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3118163943291	2	525.308741	1048.60293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.868	1	94.013	93.513	94.513	0.14493								0	0	0	0.42693	1	39291	39291		4.3292	1.44	1		+		23856	8562	11847	11900	27439	27439					0.08057138088520333
NVVRLRLRQ	9	Unmodified	_NVVRLRLRQ_					0	0	0		ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3691894412041	2	577.367456	1152.72036	2.4018	0.0013867	-1.5594	-0.00090034	0.8424	0.00048637	577.3665049446504	88.409	0.58199	88.409	88.119	88.701	0					69	18	5	0	0	0	0.85019	1	36868	36868		0.52476	0	1	76654000			23857	3584	11848	11901	27440	27440					0.15010715747962422
NVVRLRLRQ	9	Unmodified	_NVVRLRLRQ_					0	0	0		ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3694946169853	2	577.367456	1152.72036	2.4923	0.001439	-0.51786	-0.00029899	1.9744	0.00114	577.3671412862619	88.258	0.68922	88.493	88.228	88.917	0.23471					80	21	5	0	0	0	0.85019	1	36935	36935		0.52476	0	1	87194000			23858	3584	11848	11901	27441	27441					0.15010715747962422
NVVRLRLRQ	9	Unmodified	_NVVRLRLRQ_					0	0	0		ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	ENSG00000160994|ENST00000292574|CCDC105	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3709594607353	2	577.367456	1152.72036	4.6592	0.0026901	-1.3879	-0.00080131	3.2714	0.0018888	577.3665508263879	87.223	0.52708	88.719	88.456	88.983	1.4953					60	16	5	0	0	0	0.85019	1	36701	36701		0.52476	0	1	36474000			23859	3584	11848	11901	27442	27442					0.15010715747962422
NVVYLKIT	8	Unmodified	_NVVYLKIT_					0	0	0			REV__nc|ENSG00000175497|Q8N608-4|DPP10	REV__nc|ENSG00000175497|Q8N608-4|DPP10	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1956970095634	3	317.195416	948.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	105.12	104.62	105.62	0.15859								0	0	0	1.0178	1	44605	44605		1.6526	0	1		+		23860	11154	11849	11902	27443	27443					0.08807832453976516
NWHYFEVILEP	11	Unmodified	_NWHYFEVILEP_					0	0	0		tr|A0A553SQC5|A0A553SQC5_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	tr|A0A553SQC5|A0A553SQC5_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	tr|A0A553SQC5|A0A553SQC5_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	723.8613159060478	2	723.856252	1445.69795	1.2511	0.00090563	3.563	0.0025791	4.8141	0.0034847	724.3602067728576	70.367	0.30153	70.689	70.591	70.892	0.32224					19	9	3	0	0	0	0.91768	1	29455	29455		8.7454	0	1	1412900			23861	16512	11850	11903	27444	27444					-0.007069732309446408
NWKLLAKGLLI	11	Unmodified	_NWKLLAKGLLI_					0	0	0		nc|ENSG00000154767|Q01831-2|XPC;ENSG00000154767|ENST00000285021|XPC	nc|ENSG00000154767|Q01831-2|XPC	nc|ENSG00000154767|Q01831-2|XPC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.1551086306572	4	317.957684	1267.80163	-0.1109	-3.5262E-05	0.72787	0.00023143	0.61697	0.00019617	317.95790114076425	23.407	0.34066	25.059	24.93	25.271	1.6511					16	10	2	0	0	0	0.14606	1	9751	9751		0.45452	0.29519	1	353090			23862	3396	11851	11904	27445	27445					0.17843978667360716
NWKLLAKGLLI	11	Unmodified	_NWKLLAKGLLI_					0	0	0		nc|ENSG00000154767|Q01831-2|XPC;ENSG00000154767|ENST00000285021|XPC	nc|ENSG00000154767|Q01831-2|XPC	nc|ENSG00000154767|Q01831-2|XPC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.1546813845634	4	317.957684	1267.80163	-0.097792	-3.1094E-05	0.91035	0.00028945	0.81256	0.00025836	317.9578942284833	23.775	0.29493	25.46	25.304	25.599	1.6845					14	9	2	0	0	0	0.14606	1	9872	9872		0.45452	0.33165	1	294680			23863	3396	11851	11904	27446	27446					0.17843978667360716
NWKRSQGGSPW	11	Unmodified	_NWKRSQGGSPW_					0	0	0		ENST00000277865.4_1_10:88834325-88836344:-|nuORF	ENST00000277865.4_1_10:88834325-88836344:-|nuORF	ENST00000277865.4_1_10:88834325-88836344:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8847839236259	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.39	1	112.54	112.04	113.04	0.14912								0	0	0	0.63775	1	48690	48690		0.094841	0	1				23864	5692	11852	11905	27447	27447					-0.012230481449478248
NWLRRIIPSV	10	Unmodified	_NWLRRIIPSV_					0	0	0			REV__ENST00000303115.7_1_5:35874625-35876091:+|nuORF	REV__ENST00000303115.7_1_5:35874625-35876091:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.3807250857353	2	627.377489	1252.74043	2.3728	0.0014887	-1.0921	-0.00068516	1.2807	0.0008035	627.3766876430648	80.058	0.37305	81.309	81.14	81.513	1.2512					19	11	2	0	0	0	0.38174	1	33612	33612		34.402	3.6983	1	1392200	+		23865	12324	11853	11906	27448	27448					0.1241646668793237
NWLRRIIPSV	10	Unmodified	_NWLRRIIPSV_					0	0	0			REV__ENST00000303115.7_1_5:35874625-35876091:+|nuORF	REV__ENST00000303115.7_1_5:35874625-35876091:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	627.3771240115166	2	627.377489	1252.74043	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.611	1	81.328	80.828	81.828	1.7167								0	0	0	0.4383	1	33390	33390		27.629	2.7472	1		+		23866	12324	11853	11906	27449	27449					0.1241646668793237
NWPSRPYLF	9	Unmodified	_NWPSRPYLF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.3013793826103	2	590.300916	1178.58728	0.43587	0.00025729	-0.13296	-7.8484E-05	0.30291	0.00017881	590.300984726819	57.541	0.40887	58.956	58.767	59.176	1.4145					46	25	2	0	0	0	0.010279	3	24121	24078;24121;24160		107.19	73.085	1	7840300			23867	2378	11854	11907	27450;27451;27452	27451					0.005128515714659443
NWPSRPYLF	9	Unmodified	_NWPSRPYLF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3012573122978	2	590.300916	1178.58728	0.72232	0.00042638	-0.90381	-0.00053352	-0.18149	-0.00010713	590.3005202875394	57	0.42965	58.969	58.721	59.151	1.9684					36	19	4	0	0	0	0.024001	2	23880	23838;23880		96.111	69.227	1	8961100			23868	2378	11854	11907	27453;27454	27454					0.005128515714659443
NWRKPLRLL	9	Unmodified	_NWRKPLRLL_					0	0	0			REV__ENST00000489476.5_1_2:73956300-73964431:-|nuORF	REV__ENST00000489476.5_1_2:73956300-73964431:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2499267458916	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.862	1	19.897	19.397	20.397	1.0351								0	0	0	0.42693	1	7859	7859		1.1933	0.12188	1		+		23869	13214	11855	11908	27455	27455					0.14536787896122405
NWTAMKEALVQ	11	Unmodified	_NWTAMKEALVQ_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889953494072	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.356	1	27.627	27.127	28.127	1.2715								0	0	0	0.63775	1	11037	11037		0.45452	0.1855	1				23870	4935	11856	11909	27456	27456					0.010571113458127002
NWVPTLTY	8	Unmodified	_NWVPTLTY_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2577087283134	2	497.255643	992.496732	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.951	1	34.248	33.748	34.748	0.29701								0	0	0	1.0178	1	14256	14256		2.3027	0	1		+		23871	11425	11857	11910	27457	27457					0.00018382523182935984
NWWNTELC	8	Unmodified	_NWWNTELC_					0	0	0		ENSG00000011083|ENST00000230671|SLC6A7	ENSG00000011083|ENST00000230671|SLC6A7	ENSG00000011083|ENST00000230671|SLC6A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2288085818291	2	533.226559	1064.43857	2.0121	0.0010729	0.54468	0.00029044	2.5568	0.0013633	533.2271790600635	67.707	1.1038	69.085	68.633	69.737	1.3778					161	35	9	0	0	0	0.88163	1	28367	28367		7.9102	1.187	1	108340000			23872	562	11858	11911	27458	27458					-0.09107622393730708
NWWVMNIPVGS	11	Unmodified	_NWWVMNIPVGS_					0	0	0			REV__nc|ENSG00000152520|Q58A45-4|PAN3	REV__nc|ENSG00000152520|Q58A45-4|PAN3	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8821899294853	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8988	1	7.6296	7.1296	8.1296	0.73074								0	0	0	0.63775	1	2865	2865		0.094841	0	1		+		23873	10423	11859	11912	27459	27459					-0.01606853963062349
NYAENILTL	9	Unmodified	_NYAENILTL_					0	0	0		ENSG00000132436|ENST00000433017|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7789184451103	2	525.776939	1049.53933	1.9717	0.0010367	-0.085742	-4.5081E-05	1.886	0.00099159	525.7769372580897	66.463	0.36932	67.852	67.657	68.027	1.3888					27	11	3	0	0	0	0.12251	1	27857	27857		41.84	17.819	1	2403000			23874	2531	11860	11913	27460	27460					0.016537328607682866
NYAENILTL	9	Unmodified	_NYAENILTL_					0	0	0		ENSG00000132436|ENST00000433017|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7782470583916	2	525.776939	1049.53933	1.7925	0.00094247	0.068373	3.5949E-05	1.8609	0.00097842	525.7766327649051	65.996	0.37273	67.904	67.735	68.107	1.9085					23	11	3	0	0	0	0.063746	1	27679	27679		62.573	31.936	1	2410300			23875	2531	11860	11913	27461	27461					0.016537328607682866
NYAFKIYDF	9	Unmodified	_NYAFKIYDF_					0	0	0		nc|ENSG00000136425|O75838-4|CIB2;nc|ENSG00000136425|O75838-3|CIB2;ENSG00000136425|ENST00000258930|CIB2;nc|ENSG00000136425|O75838-2|CIB2	nc|ENSG00000136425|O75838-4|CIB2	nc|ENSG00000136425|O75838-4|CIB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.7891113162041	2	590.787307	1179.56006	2.9892	0.001766	-0.0076727	-4.5329E-06	2.9816	0.0017615	590.7872019675166	61.658	0.68026	63.076	62.653	63.333	1.4177					54	21	4	0	0	0	4.34E-05	3	25900	25815;25860;25900		155.03	113.07	1	12768000			23876	2724	11861	11914	27462;27463;27464	27464					-0.022536767595738638
NYAFKIYDF	9	Unmodified	_NYAFKIYDF_					0	0	0		nc|ENSG00000136425|O75838-4|CIB2;nc|ENSG00000136425|O75838-3|CIB2;ENSG00000136425|ENST00000258930|CIB2;nc|ENSG00000136425|O75838-2|CIB2	nc|ENSG00000136425|O75838-4|CIB2	nc|ENSG00000136425|O75838-4|CIB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.7884399294853	2	590.787307	1179.56006	2.4842	0.0014676	0.50879	0.00030059	2.993	0.0017682	590.7874913197371	61.117	0.70816	63.082	62.637	63.345	1.9653					57	22	4	0	0	0	0.0022704	3	25663	25614;25663;25717		129.77	79.839	1	12260000			23877	2724	11861	11914	27465;27466;27467	27466					-0.022536767595738638
NYAFLHRTL	9	Unmodified	_NYAFLHRTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8064453005791	2	567.806365	1133.59818	0.69177	0.00039279	0.81551	0.00046305	1.5073	0.00085584	567.8064803990303	31.962	0.25291	33.243	33.08	33.333	1.2813					12	8	2	0	0	0	0.18337	2	13436	13389;13436		34.932	15.675	1	1446300			23878	4524;2367	11862	11915	27468;27469	27469					0.03672253945774173
NYAFLHRTL	9	Unmodified	_NYAFLHRTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8062621951103	2	567.806365	1133.59818	0.8829	0.00050132	0.92578	0.00052566	1.8087	0.001027	567.8070159754551	31.406	0.28288	33.231	33.075	33.358	1.8246					18	9	3	0	0	0	0.15066	2	13132	13132;13178		38.615	19.539	1	1621700			23879	4524;2367	11862	11915	27470;27471	27470					0.03672253945774173
NYALKMFLY	9	Unmodified	_NYALKMFLY_					0	0	0		nc|ENSG00000009844|Q9NP79-2|VTA1;ENSG00000009844|ENST00000367630|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8033325076103	2	581.801903	1161.58925	2.2778	0.0013252	-0.08727	-5.0774E-05	2.1905	0.0012744	581.8022895476873	65.749	0.33678	67.148	66.973	67.31	1.3989					20	10	2	0	0	0	0.091139	1	27582	27582		52.268	33.011	1	2406500			23880	540	11863	11916	27472	27472					0.014921442650575045
NYALKMFLY	9	Unmodified	_NYALKMFLY_					0	0	0		nc|ENSG00000009844|Q9NP79-2|VTA1;ENSG00000009844|ENST00000367630|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	nc|ENSG00000009844|Q9NP79-2|VTA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.8027831912041	2	581.801903	1161.58925	1.7458	0.0010157	1.1692	0.00068024	2.9149	0.0016959	581.8025950054008	65.268	0.34335	67.176	67.001	67.344	1.9085					23	10	3	0	0	0	0.073578	1	27370	27370		58.679	42.113	1	2212800			23881	540	11863	11916	27473	27473					0.014921442650575045
NYAPAFTML	9	Unmodified	_NYAPAFTML_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000508181.5_1_5:94842662-94852339:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1027.491137683392	1	1027.49173	1026.48445	2.2655	0.0023278	-2.6228	-0.0026949	-0.35723	-0.00036705	1027.4865283233717	70.267	0.28378	71.621	71.46	71.744	1.3536					13	8	2	0	0	0	0.031377	1	29493	29493		85.272	52.967	1	1663900			23882	5065	11864	11917	27474	27474					-0.027729772114980733
NYAPAFTML	9	Unmodified	_NYAPAFTML_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000508181.5_1_5:94842662-94852339:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2513915896416	2	514.249503	1026.48445	3.1792	0.0016349	-0.32081	-0.00016498	2.8584	0.0014699	514.2494597402148	70.261	0.37872	71.614	71.429	71.807	1.3536					22	11	3	0	0	0	0.10294	1	29495	29495		48.346	28.907	1	1289600			23883	5065	11864	11917	27475	27475					-0.027729772114980733
NYAPAFTML	9	Unmodified	_NYAPAFTML_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000508181.5_1_5:94842662-94852339:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2512084841728	2	514.249503	1026.48445	3.1448	0.0016172	-0.13641	-7.015E-05	3.0084	0.0015471	514.2493489580744	69.754	0.31493	71.592	71.404	71.719	1.8378					22	9	3	0	0	0	0.46905	1	29257	29257		16.942	4.4107	1	1595300			23884	5065	11864	11917	27476	27476					-0.027729772114980733
NYAPAFTML	9	Unmodified	_NYAPAFTML_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3;ENST00000508181.5_1_5:94842662-94852339:-|nuORF	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1027.49173	1026.48445	3.2273	0.003316	-2.7487	-0.0028243	0.47853	0.00049168	1027.4860682365127	69.771	0.28313	71.609	71.436	71.719	1.8378	-0.0060663	-7.2593E-05	NaN	85.272	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1607000			23885	5065	11864	11917							-0.027729772114980733
NYAQVFNKL	9	Unmodified	_NYAQVFNKL_					0	0	0		ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.7939330935478	2	548.792924	1095.57129	1.7545	0.00096285	0.7733	0.00042438	2.5278	0.0013872	548.7929173643979	43.732	0.33521	45.086	44.886	45.222	1.3536					20	10	3	0	0	0	0.031377	1	18329	18329		85.272	47.298	1	2440900			23886	2718	11865	11918	27477	27477					0.027331453345595946
NYAQVFNKL	9	Unmodified	_NYAQVFNKL_					0	0	0		ENSG00000136261|ENST00000258761|BZW2;nc|ENSG00000136261|Q9Y6E2-2|BZW2;ENST00000480517.5_1_7:16705068-16725727:+|nuORF	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.7935058474541	2	548.792924	1095.57129	1.9032	0.0010445	0.91009	0.00049945	2.8133	0.0015439	548.7921354504059	43.111	0.39247	45.032	44.781	45.173	1.9211					25	12	3	0	0	0	0.066815	1	18057	18057		61.357	30.721	1	2039200			23887	2718	11865	11918	27478	27478					0.027331453345595946
NYAQVLDKF	9	Unmodified	_NYAQVLDKF_					0	0	0		ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENST00000519169.5_1_8:131191508-131249207:-|nuORF;ASAP1|p.K992Qfs*25|1|0.06|ENSG00000153317|chr8:130060797-130060798|-/G|frameshift_variant	ENSG00000153317|ENST00000518721|ASAP1	ENSG00000153317|ENST00000518721|ASAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.7512084841728	2	549.284931	1096.55531	1.6987	0.0009331	0.064401	3.5374E-05	1.7632	0.00096847	549.2850173550893	48.024	0.50184	49.412	49.116	49.618	1.388					40	15	4	0	0	0	0.068287	1	20104	20104		41.956	16.556	1	10335000			23888	3354	11866	11919	27479	27479					0.010894390976773138
NYAQVLDKF	9	Unmodified	_NYAQVLDKF_					0	0	0		ENSG00000153317|ENST00000518721|ASAP1;nc|ENSG00000153317|Q9ULH1-2|ASAP1;ENST00000519169.5_1_8:131191508-131249207:-|nuORF;ASAP1|p.K992Qfs*25|1|0.06|ENSG00000153317|chr8:130060797-130060798|-/G|frameshift_variant	ENSG00000153317|ENST00000518721|ASAP1	ENSG00000153317|ENST00000518721|ASAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	549.7510253787041	2	549.284931	1096.55531	2.5413	0.0013959	-0.34458	-0.00018927	2.1967	0.0012066	549.2844911968464	47.544	0.55635	49.52	49.187	49.743	1.976					33	17	3	0	0	0	0.07477	1	19948	19948		31.268	27.324	1	10148000			23889	3354	11866	11919	27480	27480					0.010894390976773138
NYARGHYTI	9	Unmodified	_NYARGHYTI_					0	0	0		ENST00000550254.1_1_12:49580068-49580335:-|nuORF;ENST00000530835.1_1_11:90015825-90016947:+|nuORF;ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;ENST00000548363.1_1_12:49580068-49582762:-|nuORF;nc|ENSG00000198033|P0DPH7-2|TUBA3C;ENSG00000152086|ENST00000312988|TUBA3E;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;TUBA1A|p.R264Pfs*25|1|0.06|ENSG00000167552|chr12:49185575-49185575|C/-|frameshift_variant;TUBA1B|p.G111Afs*71|1|0.21|ENSG00000123416|chr12:49129285-49129285|C/-|frameshift_variant;ENST00000462806.5_1_2:220116196-220118580:-|nuORF	ENST00000550254.1_1_12:49580068-49580335:-|nuORF;ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.5175048708916	3	365.51744	1093.53049	-0.12945	-4.7316E-05	-0.72844	-0.00026626	-0.85789	-0.00031357	365.51731721583855	15.399	0.21672	16.438	16.272	16.488	1.0392					15	6	3	0	0	0	0.57699	1	6385	6385		12.241	4.0851	1	1687400			23890	2190;7261	11867	11920	27481	27481					-0.012531959850548446
NYASTFTWW	9	Unmodified	_NYASTFTWW_					0	0	0		nc|ENSG00000052802|Q15800-2|MSMO1;ENSG00000052802|ENST00000261507|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2621337771416	2	588.261456	1174.50836	2.6303	0.0015473	-0.8346	-0.00049097	1.7957	0.0010564	588.261170175772	80.49	0.39698	81.741	81.544	81.941	1.2512					37	12	4	0	0	0	0.066815	2	33807	33759;33807		61.357	38.621	1	6862600			23891	705	11868	11921	27482;27483	27483					-0.07191420453455066
NYASTFTWW	9	Unmodified	_NYASTFTWW_					0	0	0		nc|ENSG00000052802|Q15800-2|MSMO1;ENSG00000052802|ENST00000261507|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1175.517626941204	1	1175.51564	1174.50836	2.2059	0.0025931	-2.4503	-0.0028804	-0.24439	-0.00028728	1175.51191396156	80.503	0.20959	81.754	81.64	81.85	1.2512					10	6	2	0	0	0	0.089748	1	33821	33821		29.082	16.039	1	906280			23892	705	11868	11921	27484	27484					-0.07191420453455066
NYASTFTWW	9	Unmodified	_NYASTFTWW_					0	0	0		nc|ENSG00000052802|Q15800-2|MSMO1;ENSG00000052802|ENST00000261507|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	nc|ENSG00000052802|Q15800-2|MSMO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2621948122978	2	588.261456	1174.50836	1.1948	0.00070286	0.19076	0.00011222	1.3856	0.00081508	588.2617178059754	80.025	0.37109	81.742	81.537	81.908	1.7167					30	11	3	0	0	0	0.031377	2	33569	33523;33569		85.272	67.126	1	3541800			23893	705	11868	11921	27485;27486	27486					-0.07191420453455066
NYATRIVTL	9	Unmodified	_NYATRIVTL_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8064453005791	2	525.800749	1049.58694	2.3674	0.0012448	3.4878	0.0018339	5.8552	0.0030787	525.8031498783555	39.472	0.2906	40.782	40.586	40.877	1.3102					15	9	2	0	0	0	0.037863	1	16544	16544		78.06	28.127	1	1686900			23894	1934	11869	11922	27487	27487					0.06413431851638052
NYATRIVTL	9	Unmodified	_NYATRIVTL_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.8058959841728	2	525.800749	1049.58694	1.3976	0.00073484	4.4877	0.0023596	5.8853	0.0030945	525.8035632769872	38.93	0.29075	40.767	40.59	40.88	1.8366					14	8	2	0	0	0	0.099383	2	16297	16297;16347		49.527	25.507	1	1497900			23895	1934	11869	11922	27488;27489	27488					0.06413431851638052
NYAWVYYHL	9	Unmodified	_NYAWVYYHL_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.7936279177666	2	614.792924	1227.57129	2.7371	0.0016827	-0.30975	-0.00019043	2.4273	0.0014923	614.7928624520166	61.743	0.50203	63.161	62.957	63.459	1.4177					38	15	3	0	0	0	0.030843	3	25926	25873;25926;25983		86.121	57.04	1	3674300			23896	2092	11870	11923	27490;27491;27492	27491					-0.03338854665435065
NYAWVYYHL	9	Unmodified	_NYAWVYYHL_					0	0	0		ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	ENSG00000119917|ENST00000371818|IFIT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.7938110232353	2	614.792924	1227.57129	2.1299	0.0013094	0.81977	0.00050399	2.9496	0.0018134	614.7933967802113	61.265	0.43699	63.223	62.997	63.434	1.9577					39	13	4	0	0	0	0.052478	2	25667	25667;25715		67.035	30.908	1	3977100			23897	2092	11870	11923	27493;27494	27493					-0.03338854665435065
NYCFEDFLF	9	Unmodified	_NYCFEDFLF_					0	0	0			REV__ENST00000301068.10_1_12:49458528-49458861:-|nuORF	REV__ENST00000301068.10_1_12:49458528-49458861:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2531005740166	2	599.2497	1196.48485	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.018	1	81.734	81.234	82.234	1.7167								0	0	0	0.317	1	33560	33560		16.942	4.7016	1		+		23898	12313	11871	11924	27495	27495					-0.10553602282311658
NYDDIKLKIT	10	Unmodified	_NYDDIKLKIT_					0	0	0			REV__tr|A0A7D7ADT0|A0A7D7ADT0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00105PE=4SV=1	REV__tr|A0A7D7ADT0|A0A7D7ADT0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3427001833916	2	611.837528	1221.6605	2.6402	0.0016154	3.4526	0.0021124	6.0928	0.0037278	611.8386905125108	85.437	1.1973	86.569	86.152	87.35	1.1326					120	47	3	0	0	0	0.89803	1	36095	36095		1.4819	0.95714	1	107710000	+		23899	15910	11872	11925	27496	27496					0.05853935503409957
NYDDIKLKIT	10	Unmodified	_NYDDIKLKIT_					0	0	0			REV__tr|A0A7D7ADT0|A0A7D7ADT0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00105PE=4SV=1	REV__tr|A0A7D7ADT0|A0A7D7ADT0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3428832888603	2	611.837528	1221.6605	3.7371	0.0022865	2.4395	0.0014926	6.1766	0.0037791	611.8383180885869	86.025	0.36689	87.572	87.323	87.69	1.547					27	14	2	0	0	0	0.89803	1	36148	36148		1.4819	0.28856	1	73997000	+		23900	15910	11872	11925	27497	27497					0.05853935503409957
NYDKFLVRWFD	11	Unmodified	_NYDKFLVRWFD_					0	0	0			REV__ENSG00000160224|ENST00000291582|AIRE	REV__ENSG00000160224|ENST00000291582|AIRE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	751.8733398318291	2	751.874976	1501.7354	0.30035	0.00022582	-3.5788	-0.0026908	-3.2784	-0.002465	751.8730513194984	53.504	0.24901	54.905	54.756	55.005	1.4005					24	11	3	0	0	0	0.85967	1	22347	22347		12.241	6.9438	1	7959000	+		23901	10594	11873	11926	27498	27498					0.004601180346526235
NYDKFLVRWFD	11	Unmodified	_NYDKFLVRWFD_					0	0	0			REV__ENSG00000160224|ENST00000291582|AIRE	REV__ENSG00000160224|ENST00000291582|AIRE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	751.8719360232353	2	751.874976	1501.7354	0.37393	0.00028115	-3.4251	-0.0025753	-3.0512	-0.0022941	751.8724194418138	52.903	0.2275	54.872	54.77	54.997	1.9697					31	14	3	0	0	0	0.62604	1	22179	22179		20.415	3.3016	1	8496100	+		23902	10594	11873	11926	27499	27499					0.004601180346526235
NYFDEQFEF	9	Unmodified	_NYFDEQFEF_					0	0	0		ENSG00000162639|ENST00000651461|HENMT1	ENSG00000162639|ENST00000651461|HENMT1	ENSG00000162639|ENST00000651461|HENMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.7559692263603	2	619.753661	1237.49277	3.0782	0.0019077	-0.32776	-0.00020313	2.7504	0.0017046	619.7535121933959	72.832	0.5291	74.162	73.883	74.412	1.3297					51	16	4	0	0	0	0.007852	3	30578	30494;30539;30578		111.29	63.538	1	13036000			23903	3634	11874	11927	27500;27501;27502	27502					-0.11647751761188374
NYFDEQFEF	9	Unmodified	_NYFDEQFEF_					0	0	0		ENSG00000162639|ENST00000651461|HENMT1	ENSG00000162639|ENST00000651461|HENMT1	ENSG00000162639|ENST00000651461|HENMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.7556640505791	2	619.753661	1237.49277	2.3547	0.0014594	0.072446	4.4899E-05	2.4272	0.0015043	619.7537559974469	72.312	0.49503	74.122	73.921	74.416	1.8101					47	15	4	0	0	0	0.0058174	3	30354	30309;30354;30392		118.89	65.759	1	13519000			23904	3634	11874	11927	27503;27504;27505	27504					-0.11647751761188374
NYFESTDGLIW	11	Unmodified	_NYFESTDGLIW_					0	0	0		nc|ENSG00000213465|P36404-2|ARL2;ENSG00000213465|ENST00000246747|ARL2;ENST00000524585.1_1_11:64781679-64786448:+|nuORF	nc|ENSG00000213465|P36404-2|ARL2	nc|ENSG00000213465|P36404-2|ARL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.8112670779228	2	672.808968	1343.60338	2.3824	0.0016029	-1.0396	-0.00069947	1.3427	0.00090341	672.8086762634085	80.583	0.30104	81.834	81.64	81.941	1.2512					24	9	3	0	0	0	0.10188	1	33832	33832		55.503	43.262	1	2984200			23905	5220	11875	11928	27506	27506					-0.05467531772956136
NYFESTDGLIW	11	Unmodified	_NYFESTDGLIW_					0	0	0		nc|ENSG00000213465|P36404-2|ARL2;ENSG00000213465|ENST00000246747|ARL2;ENST00000524585.1_1_11:64781679-64786448:+|nuORF	nc|ENSG00000213465|P36404-2|ARL2	nc|ENSG00000213465|P36404-2|ARL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.8123046755791	2	672.808968	1343.60338	0.78961	0.00053125	2.0966	0.0014106	2.8862	0.0019418	672.8096917132087	80.115	0.30151	81.832	81.663	81.964	1.7167					13	9	2	0	0	0	0.062664	1	33605	33605		63.961	46.848	1	3029200			23906	5220	11875	11928	27507	27507					-0.05467531772956136
NYFFDAAKLMF	11	Unmodified	_NYFFDAAKLMF_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MSMS	GG20161007_CRH_Patient100_W632_01	3	683.8300048708916	2	683.828649	1365.64274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.022	1	88.114	87.614	88.614	1.0918								0	0	0	5.0763E-12	1	36702	36702		97.741	64.955	1				23907	2052	11876	11929	27508	27508					-0.025451030231124605
NYFHLAVAF	9	Unmodified	_NYFHLAVAF_					0	0	0		ENSG00000134516|ENST00000520908|DOCK2;ENST00000484400.5_1_10:129046280-129142589:+|nuORF;ENST00000467709.6_1_8:25191660-25227073:+|nuORF;ENST00000523351.5_1_5:169188379-169509859:+|nuORF;nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1;DOCK1-NPS|1|fusion;ENSG00000147459|ENST00000276440|DOCK5	ENSG00000134516|ENST00000520908|DOCK2;nc|ENSG00000150760|Q14185|DOCK1;ENSG00000147459|ENST00000276440|DOCK5	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2818481326103	2	541.276909	1080.53927	1.9147	0.0010364	2.9882	0.0016174	4.9028	0.0026538	541.2787770976338	67.585	0.34061	68.963	68.724	69.065	1.3778					19	10	3	0	0	0	0.37357	1	28377	28377		21.747	4.6601	1	1249000			23908	3272;2620;3181	11877	11930	27509	27509					0.0022177765142714634
NYFIPSHYF	9	Unmodified	_NYFIPSHYF_					0	0	0		nc|ENSG00000146414|Q149N8-5|SHPRH;SHPRH|p.Y702Sfs*18|1|0.14|ENSG00000146414|chr6:145943276-145943276|T/-|frameshift_variant;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;ENSG00000146414|ENST00000275233|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.2802612185478	2	594.279649	1186.54475	1.3742	0.00081666	2.0388	0.0012116	3.413	0.0020283	594.2805175373779	58.633	0.44505	60.051	59.784	60.229	1.4181					22	13	2	0	0	0	0.051699	2	24573	24573;24631		67.344	46.89	1	4741100			23909	3152	11878	11931	27510;27511	27510					-0.04106543556758879
NYFIPSHYF	9	Unmodified	_NYFIPSHYF_					0	0	0		nc|ENSG00000146414|Q149N8-5|SHPRH;SHPRH|p.Y702Sfs*18|1|0.14|ENSG00000146414|chr6:145943276-145943276|T/-|frameshift_variant;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;ENSG00000146414|ENST00000275233|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.2811157107353	2	594.279649	1186.54475	1.0641	0.00063239	0.95533	0.00056774	2.0195	0.0012001	594.2800799139784	58.099	0.37537	60.068	59.871	60.247	1.969					19	11	2	0	0	0	0.042029	2	24367	24367;24419		74.423	53.969	1	7871500			23910	3152	11878	11931	27512;27513	27512					-0.04106543556758879
NYFRGYEW	8	Unmodified	_NYFRGYEW_					0	0	0		nc|ENSG00000054983|P54803-5|GALC;nc|ENSG00000054983|P54803-4|GALC;nc|ENSG00000054983|P54803-3|GALC;ENSG00000054983|ENST00000261304|GALC	nc|ENSG00000054983|P54803-5|GALC	nc|ENSG00000054983|P54803-5|GALC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7557250857353	2	567.753798	1133.49304	2.6799	0.0015215	-1.8367	-0.0010428	0.84318	0.00047872	567.7532300012979	44.645	0.24863	46.01	45.931	46.18	1.3653					15	7	3	0	0	0	0.65897	1	18724	18724		34.402	13.948	1	810960			23911	717	11879	11932	27514	27514					-0.06836287250666828
NYFRGYEW	8	Unmodified	_NYFRGYEW_					0	0	0		nc|ENSG00000054983|P54803-5|GALC;nc|ENSG00000054983|P54803-4|GALC;nc|ENSG00000054983|P54803-3|GALC;ENSG00000054983|ENST00000261304|GALC	nc|ENSG00000054983|P54803-5|GALC	nc|ENSG00000054983|P54803-5|GALC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.7543212771416	2	567.753798	1133.49304	2.2753	0.0012918	-1.0774	-0.00061171	1.1979	0.00068013	567.75256068973	44.062	0.31524	46.005	45.831	46.146	1.9438					15	9	2	0	0	0	0.7528	1	18457	18457		25.399	4.9457	1	949940			23912	717	11879	11932	27515	27515					-0.06836287250666828
NYGDYFNVF	9	Unmodified	_NYGDYFNVF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1138.483935534954	1	1138.484	1137.47673	2.8757	0.003274	-0.018386	-2.0932E-05	2.8573	0.003253	1138.4833186403764	74.59	0.36201	75.896	75.728	76.09	1.3063					25	11	3	0	0	0	0.029061	2	31289	31289;31340		88.954	62.686	1	2877500			23913	1597	11880	11933	27516;27517	27516					-0.08651413207417136
NYGDYFNVF	9	Unmodified	_NYGDYFNVF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1138.487353503704	1	1138.484	1137.47673	2.7942	0.0031811	-0.77888	-0.00088674	2.0153	0.0022944	1138.4823538647493	74.145	0.33527	75.941	75.778	76.114	1.7962					25	10	3	0	0	0	0.019432	1	31090	31090		99.799	79.345	1	4395600			23914	1597	11880	11933	27518	27518					-0.08651413207417136
NYGDYFNVFF	10	Unmodified	_NYGDYFNVFF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.2831298708916	2	643.279846	1284.54514	3.7724	0.0024267	0.41734	0.00026847	4.1898	0.0026952	643.2806563450475	93.222	0.26033	94.094	93.998	94.258	0.87176					17	7	3	0	0	0	0.25008	1	39237	39237		57.722	36.185	1	1418700			23915	1597	11881	11934	27519	27519					-0.08575168627567109
NYGDYFNVFF	10	Unmodified	_NYGDYFNVFF_					0	0	0		nc|ENSG00000107290|Q7Z333-3|SETX;ENSG00000107290|ENST00000224140|SETX;nc|ENSG00000107290|Q7Z333-4|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	nc|ENSG00000107290|Q7Z333-3|SETX	MSMS	GG20161007_CRH_Patient100_W632_02	4	643.2800170779228	2	643.279846	1284.54514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.833	1	94.11	93.61	94.61	1.277								0	0	0	0.10476	1	39068	39068		57.722	49.129	1				23916	1597	11881	11934	27520	27520					-0.08575168627567109
NYGGKWPFW	9	Unmodified	_NYGGKWPFW_					0	0	0		ENSG00000113407|ENST00000265112|TARS1;nc|ENSG00000113407|P26639-2|TARS1;ENST00000509410.1_1_5:33461160-33466106:+|nuORF;nc|ENSG00000185418|A2RTX5-2|TARS3;ENSG00000185418|ENST00000335968|TARS3	ENSG00000113407|ENST00000265112|TARS1	ENSG00000113407|ENST00000265112|TARS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	577.8574096560478	2	577.774534	1153.53451	3.016	0.0017425	1.3067	0.000755	4.3227	0.0024975	577.7750560182119	64.721	0.43338	66.129	65.923	66.356	1.4071					25	13	3	0	0	0	0.084274	1	27162	27162		30.225	13.283	1	1064700			23917	1822	11882	11935	27521	27521					-0.03611106491348437
NYGLRTFLF	9	Unmodified	_NYGLRTFLF_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6;ENST00000586702.1_1_19:11310175-11313198:-|nuORF	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8043090701103	2	565.803291	1129.59203	2.2685	0.0012835	0.93168	0.00052715	3.2002	0.0018107	565.8036138900604	68.327	0.30544	69.704	69.523	69.828	1.3778					18	9	2	0	0	0	0.093705	1	28663	28663		51.415	22.928	1	1866300			23918	2417	11883	11936	27522	27522					0.032417357142321634
NYGLRTFLF	9	Unmodified	_NYGLRTFLF_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6;ENST00000586702.1_1_19:11310175-11313198:-|nuORF	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8046142458916	2	565.803291	1129.59203	1.8498	0.0010467	0.062162	3.5172E-05	1.912	0.0010818	565.8033093661633	67.689	0.34229	69.559	69.394	69.736	1.87					25	10	3	0	0	0	0.16939	1	28399	28399		36.506	17.067	1	1551200			23919	2417	11883	11936	27523	27523					0.032417357142321634
NYGLVAPPA	9	Unmodified	_NYGLVAPPA_					0	0	0		ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI;ENST00000489039.1_1_20:36948541-36950068:+|nuORF	ENSG00000101425|ENST00000642449|BPI	ENSG00000101425|ENST00000642449|BPI	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1653625369072	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.151	1	84.412	83.912	84.912	0.26083								0	0	0	0.42693	1	35197	35197		0.26902	0	1				23920	1349	11884	11937	27524	27524					0.016301133517117705
NYGLVAPPA	9	Unmodified	_NYGLVAPPA_					0	0	0		ENSG00000101425|ENST00000642449|BPI;nc|ENSG00000101425|P17213|BPI;ENST00000489039.1_1_20:36948541-36950068:+|nuORF	ENSG00000101425|ENST00000642449|BPI	ENSG00000101425|ENST00000642449|BPI	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1646911501884	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.868	1	77.635	77.135	78.135	1.7672								0	0	0	0.42693	1	31831	31831		0.26902	0	1				23921	1349	11884	11937	27525	27525					0.016301133517117705
NYGQYFTLW	9	Unmodified	_NYGQYFTLW_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.2791015505791	2	596.277106	1190.53966	3.9994	0.0023848	-0.047895	-2.8559E-05	3.9515	0.0023562	596.2766804504336	82.183	0.5672	83.396	83.099	83.666	1.2125					61	17	5	0	0	0	0.022807	4	34477	34431;34477;34516;34560		97.075	73.926	1	12325000			23922	1686	11885	11938	27526;27527;27528;27529	27527					-0.04798847419397134
NYGQYFTLW	9	Unmodified	_NYGQYFTLW_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1191.547045886517	1	1191.54694	1190.53966	3.5678	0.0042513	-0.70903	-0.00084484	2.8588	0.0034064	1191.5460424996547	82.152	0.31285	83.364	83.192	83.505	1.2125					16	9	2	0	0	0	0.022807	2	34510	34457;34510		97.075	68.588	1	2666700			23923	1686	11885	11938	27530;27531	27531					-0.04798847419397134
NYGQYFTLW	9	Unmodified	_NYGQYFTLW_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.2783691287041	2	596.277106	1190.53966	4.0626	0.0024224	-0.82175	-0.00048999	3.2408	0.0019324	596.2763050137174	81.702	0.52676	83.398	83.106	83.633	1.6959					57	16	5	0	0	0	0.0037165	4	34243	34199;34243;34293;34334		125.62	85.667	1	11771000			23924	1686	11885	11938	27532;27533;27534;27535	27533					-0.04798847419397134
NYGQYFTLW	9	Unmodified	_NYGQYFTLW_					0	0	0		ENSG00000109929|ENST00000264027|SC5D;SORL1-SC5DL|1|fusion	ENSG00000109929|ENST00000264027|SC5D	ENSG00000109929|ENST00000264027|SC5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1191.552539050579	1	1191.54694	1190.53966	3.388	0.004037	0.89479	0.0010662	4.2828	0.0051031	1191.5488680246617	81.717	0.34332	83.413	83.195	83.539	1.6959					23	10	3	0	0	0	0.031324	2	34283	34223;34283		85.357	61.336	1	2199100			23925	1686	11885	11938	27536;27537	27537					-0.04798847419397134
NYGRVFSEW	9	Unmodified	_NYGRVFSEW_					0	0	0		ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENSG00000114520|ENST00000251775|SNX4	ENST00000473417.5_1_3:125188296-125239016:-|nuORF	ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.2726928591728	2	579.272355	1156.53016	1.6734	0.00096937	-2.3873	-0.0013829	-0.71384	-0.00041351	579.2713130730175	45.853	0.50124	47.228	46.992	47.493	1.3751					36	15	3	0	0	0	0.0022704	3	19262	19183;19221;19262		129.77	85.365	1	9223100			23926	1868	11886	11939	27538;27539;27540	27540					-0.04184615704912176
NYGRVFSEW	9	Unmodified	_NYGRVFSEW_					0	0	0		ENST00000473417.5_1_3:125188296-125239016:-|nuORF;nc|ENSG00000114520|O95219-2|SNX4;ENST00000471751.5_1_3:125166625-125239024:-|nuORF;ENSG00000114520|ENST00000251775|SNX4	ENST00000473417.5_1_3:125188296-125239016:-|nuORF	ENST00000473417.5_1_3:125188296-125239016:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.2724487185478	2	579.272355	1156.53016	1.5898	0.0009209	-1.9776	-0.0011455	-0.38781	-0.00022465	579.271467908399	45.324	0.5987	47.284	46.99	47.589	1.9596					39	18	3	0	0	0	0.0060384	2	18996	18996;19048		118.07	73.661	1	8991600			23927	1868	11886	11939	27541;27542	27541					-0.04184615704912176
NYGVLHVTF	9	Unmodified	_NYGVLHVTF_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11;ENSG00000179873|ENST00000589093|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2748290896416	2	525.274367	1048.53418	1.3997	0.00073522	-0.52978	-0.00027828	0.8699	0.00045694	525.2741200395654	53.848	0.50603	55.248	55.072	55.578	1.4005					31	17	2	0	0	0	0.0017491	4	22577	22493;22537;22577;22629		131.27	97.165	1	24072000			23928	4529	11887	11940	27543;27544;27545;27546	27545					0.01185473788791569
NYGVLHVTF	9	Unmodified	_NYGVLHVTF_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11;ENSG00000179873|ENST00000589093|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2745239138603	2	525.274367	1048.53418	0.64995	0.0003414	-0.52809	-0.00027739	0.12186	6.4012E-05	525.2741110577232	53.34	0.4115	55.31	55.091	55.503	1.9697					27	14	2	0	0	0	0.0044745	2	22325	22325;22377		123.45	99.43	1	26121000			23929	4529	11887	11940	27547;27548	27547					0.01185473788791569
NYGVLHVTF	9	Unmodified	_NYGVLHVTF_					0	0	0		nc|ENSG00000179873|P59045-3|NLRP11;nc|ENSG00000179873|P59045-2|NLRP11;ENSG00000179873|ENST00000589093|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	nc|ENSG00000179873|P59045-3|NLRP11	MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2732421755791	2	525.274367	1048.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.537	1	55.506	55.006	56.006	1.9697								0	0	0	0.13855	1	22430	22430		30.637	13.694	1				23930	4529	11887	11940	27549	27549					0.01185473788791569
NYGWIIRYL	9	Unmodified	_NYGWIIRYL_					0	0	0		ENSG00000198727|ENST00000361789|MT-CYB	ENSG00000198727|ENST00000361789|MT-CYB	ENSG00000198727|ENST00000361789|MT-CYB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3260986208916	2	599.324391	1196.63423	2.5058	0.0015018	0.46502	0.0002787	2.9708	0.0017805	599.3235918767705	76.615	0.35429	78.382	78.159	78.514	1.7672					22	10	3	0	0	0	0.066197	1	32129	32129		78.149	64.243	1	1918900			23931	5073	11888	11941	27550	27550					0.0437771112262908
NYHDEQGEL	9	Unmodified	_NYHDEQGEL_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19;REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7354614138603	2	552.73326	1103.45197	2.1926	0.0012119	0.36562	0.00020209	2.5582	0.001414	552.733349297596	85.097	0.36227	86.256	86.056	86.418	1.159					38	11	5	0	0	0	0.42305	1	35724	35724		19.257	5.3509	1	5367200	+	+	23932	11021;13875	11889	11942	27551	27551					-0.09562093080808154
NYHDEQGEL	9	Unmodified	_NYHDEQGEL_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19;REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7346679568291	2	552.73326	1103.45197	2.4511	0.0013548	0.30961	0.00017113	2.7607	0.0015259	552.7330748507584	84.596	0.33781	86.192	86.033	86.371	1.5962					25	10	3	0	0	0	0.42305	1	35508	35508		19.257	5.3509	1	3510600	+	+	23933	11021;13875	11889	11942	27552	27552					-0.09562093080808154
NYHDEQGEL	9	Unmodified	_NYHDEQGEL_					0	0	0			REV__ENSG00000171345|ENST00000361566|KRT19;REV__ENST00000557173.1_1_12:95228580-95228931:+|nuORF	REV__ENSG00000171345|ENST00000361566|KRT19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	552.73326	1103.45197	2.4511	0.0013548	0.30961	0.00017113	2.7607	0.0015259	552.7330748507584	84.596	0.33781	86.192	86.033	86.371	1.5962	-0.096415	0.00057497	NaN	19.257	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3510600	+	+	23934	11021;13875	11889	11942							-0.09562093080808154
NYIDIVKYVF	10	Unmodified	_NYIDIVKYVF_					0	0	0		ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.8481323122978	2	637.344989	1272.67542	2.384	0.0015194	2.738	0.001745	5.122	0.0032645	637.3484883499988	82.965	0.30354	84.178	84.015	84.319	1.2125					23	9	3	0	0	0	0.64661	1	34825	34825		29.841	21.247	1	1127200			23935	3617	11890	11943	27553	27553					0.04999427371421916
NYIDIVKYVF	10	Unmodified	_NYIDIVKYVF_					0	0	0		ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	637.344989	1272.67542	2.6159	0.0016672	3.8302	0.0024412	6.4461	0.0041084	637.8472647971488	82.473	0.3081	84.143	84.017	84.326	1.67	-0.017656	0.001006	NaN	29.841	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1271900			23936	3617	11890	11943							0.04999427371421916
NYIEFTRIL	9	Unmodified	_NYIEFTRIL_					0	0	0		ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B	ENSG00000101608|ENST00000217652|MYL12A	ENSG00000101608|ENST00000217652|MYL12A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8224365115166	2	584.821681	1167.62881	3.0441	0.0017803	-2.1362	-0.0012493	0.90793	0.00053098	584.8209232303584	64.998	0.37853	66.397	66.162	66.54	1.3989					33	11	4	0	0	0	0.087723	2	27262	27217;27262		53.404	9.6316	1	8216700			23937	1360	11891	11944	27554;27555	27555					0.05169987540148213
NYIEFTRIL	9	Unmodified	_NYIEFTRIL_					0	0	0		ENSG00000101608|ENST00000217652|MYL12A;ENSG00000118680|ENST00000237500|MYL12B	ENSG00000101608|ENST00000217652|MYL12A	ENSG00000101608|ENST00000217652|MYL12A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8229858279228	2	584.821681	1167.62881	2.167	0.0012673	-1.9428	-0.0011362	0.22426	0.00013115	584.8209565573552	64.445	0.47623	66.373	66.139	66.615	1.928					39	14	4	0	0	0	0.032536	3	27040	26992;27040;27082		83.429	31.799	1	6575800			23938	1360	11891	11944	27556;27557;27558	27557					0.05169987540148213
NYIGLINRI	9	Unmodified	_NYIGLINRI_					0	0	0		nc|ENSG00000055332|P19525-2|EIF2AK2;ENSG00000055332|ENST00000233057|EIF2AK2;ENST00000496059.1_1_2:37364124-37368826:-|nuORF;EIF2AK2|p.F368Pfs*12|1|0.04|ENSG00000055332|chr2:37120106-37120107|-/CACAGGGAATAGGGAATGGAGGAAAGGC|frameshift_variant	nc|ENSG00000055332|P19525-2|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3171874880791	2	538.316566	1074.61858	1.6248	0.00087467	0.15278	8.2246E-05	1.7776	0.00095692	538.316639829101	54.012	0.6306	55.417	55.141	55.771	1.4048					67	20	5	0	0	0	0.002761	4	22615	22517;22564;22615;22659		128.37	46.752	1	162640000			23939	721	11892	11945	27559;27560;27561;27562	27561					0.08425424605570697
NYIGLINRI	9	Unmodified	_NYIGLINRI_					0	0	0		nc|ENSG00000055332|P19525-2|EIF2AK2;ENSG00000055332|ENST00000233057|EIF2AK2;ENST00000496059.1_1_2:37364124-37368826:-|nuORF;EIF2AK2|p.F368Pfs*12|1|0.04|ENSG00000055332|chr2:37120106-37120107|-/CACAGGGAATAGGGAATGGAGGAAAGGC|frameshift_variant	nc|ENSG00000055332|P19525-2|EIF2AK2	nc|ENSG00000055332|P19525-2|EIF2AK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3166992068291	2	538.316566	1074.61858	0.7881	0.00042425	0.67929	0.00036568	1.4674	0.00078992	538.3169682031678	53.485	0.7053	55.455	55.173	55.878	1.9697					80	22	5	0	0	0	4.1345E-05	6	22375	22330;22375;22423;22462;22501;22548		156.16	63.334	1	213010000			23940	721	11892	11945	27563;27564;27565;27566;27567;27568	27564					0.08425424605570697
NYIIGFELF	9	Unmodified	_NYIIGFELF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2946655154228	2	558.292225	1114.5699	3.8351	0.0021411	0.22775	0.00012715	4.0628	0.0022682	558.2923269260182	96.747	0.15372	97.031	96.954	97.107	0.28442					6	4	2	0	0	0	0.059546	1	40717	40717		64.236	33.6	1	2285700			23941	959	11893	11946	27569	27569					0.017195112458011863
NYIIGFELF	9	Unmodified	_NYIIGFELF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2959472537041	2	558.292225	1114.5699	3.2183	0.0017967	1.9073	0.0010648	5.1256	0.0028616	558.2935381458697	96.622	0.15454	96.928	96.851	97.005	0.3062					10	4	3	0	0	0	0.10294	1	40650	40650		48.346	21.462	1	1955800			23942	959	11893	11946	27570	27570					0.017195112458011863
NYIIGRCEL	9	Unmodified	_NYIIGRCEL_					0	0	0			REV__ENST00000544007.5_1_14:31028384-31077115:+|nuORF	REV__ENST00000544007.5_1_14:31028384-31077115:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	540.2792846560478	2	540.778959	1079.54336	1.8786	0.0010159	-1.2936	-0.00069954	0.58503	0.00031637	540.7790730813277	41.568	0.68284	43.46	43.269	43.952	1.8927					28	21	2	0	0	0	0.11071	1	17456	17456		15.847	0	1	814930	+		23943	8911	11894	11947	27571	27571					0.006774990828262162
NYIKDLNIL	9	Unmodified	_NYIKDLNIL_					0	0	0		ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3166381716728	2	553.316232	1104.61791	0.26005	0.00014389	0.018177	1.0058E-05	0.27823	0.00015395	553.3162054263036	56.035	0.54182	57.445	57.27	57.811	1.4099					68	25	4	0	0	0	0.0033884	4	23546	23428;23467;23508;23546		126.57	49.414	1	53774000			23944	2787	11895	11948	27572;27573;27574;27575	27575					0.06978585165848017
NYIKDLNIL	9	Unmodified	_NYIKDLNIL_					0	0	0		ENSG00000137770|ENST00000260327|CTDSPL2;nc|ENSG00000137770|Q05D32-2|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	ENSG00000137770|ENST00000260327|CTDSPL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3162719607353	2	553.316232	1104.61791	0.37574	0.0002079	-0.28662	-0.00015859	0.089117	4.931E-05	553.3161225133962	55.505	0.39195	57.474	57.325	57.717	1.9684					61	20	4	0	0	0	8.9999E-05	3	23290	23242;23290;23334		147.06	61.787	1	57502000			23945	2787	11895	11948	27576;27577;27578	27577					0.06978585165848017
NYINDLRNF	9	Unmodified	_NYINDLRNF_					0	0	0		ENST00000325222.8_1_7:148451159-148451216:+|nuORF	ENST00000325222.8_1_7:148451159-148451216:+|nuORF	ENST00000325222.8_1_7:148451159-148451216:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.7920410037041	2	584.790912	1167.56727	1.5922	0.00093113	0.7818	0.00045719	2.374	0.0013883	584.7912148184541	48.298	0.40598	49.686	49.458	49.864	1.388					29	12	3	0	0	0	0.28372	2	20205	20205;20256		26.268	5.8145	1	1812200			23946	5866	11896	11949	27579;27580	27579					-0.009809441591642099
NYINDLRNF	9	Unmodified	_NYINDLRNF_					0	0	0		ENST00000325222.8_1_7:148451159-148451216:+|nuORF	ENST00000325222.8_1_7:148451159-148451216:+|nuORF	ENST00000325222.8_1_7:148451159-148451216:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.7916747927666	2	584.790912	1167.56727	2.361	0.0013807	0.19259	0.00011262	2.5536	0.0014933	584.7905646838224	47.814	0.43436	49.79	49.555	49.989	1.976					21	13	2	0	0	0	0.20244	1	20016	20016		32.786	12.332	1	1886300			23947	5866	11896	11949	27581	27581					-0.009809441591642099
NYIPRFWTF	9	Unmodified	_NYIPRFWTF_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3179809451103	2	622.316566	1242.61858	3.0475	0.0018965	-0.83499	-0.00051963	2.2125	0.0013769	622.3161045249941	74.347	0.82067	75.665	75.405	76.226	1.318					90	26	5	0	0	0	5.6905E-23	4	31189	31139;31189;31240;31296		231.73	187.87	1	57155000			23948	1040	11897	11950	27582;27583;27584;27585	27583					0.006974246055506228
NYIPRFWTF	9	Unmodified	_NYIPRFWTF_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3181640505791	2	622.316566	1242.61858	2.5187	0.0015674	-0.76415	-0.00047554	1.7545	0.0010919	622.3161507952402	73.821	0.73636	75.617	75.377	76.114	1.7962					85	23	5	0	0	0	2.9716E-05	5	30952	30908;30952;31003;31044;31105		163.04	126.91	1	46625000			23949	1040	11897	11950	27586;27587;27588;27589;27590	27587					0.006974246055506228
NYIPYLTKL	9	Unmodified	_NYIPYLTKL_					0	0	0		SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant;ENSG00000205413|ENST00000379958|SAMD9	SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8217040896416	2	562.82115	1123.62775	1.9854	0.0011174	-0.782	-0.00044012	1.2034	0.0006773	562.8209071212648	58.961	0.3316	60.38	60.166	60.497	1.4196					19	10	2	0	0	0	0.099302	1	24706	24706		49.554	18.918	1	3088300			23950	5180	11898	11951	27591	27591					0.07087773171224399
NYIPYLTKL	9	Unmodified	_NYIPYLTKL_					0	0	0		SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant;ENSG00000205413|ENST00000379958|SAMD9	SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	SAMD9|p.E1289Dfs*17|1|0.04|ENSG00000205413|chr7:93102231-93102232|-/AG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8224365115166	2	562.82115	1123.62775	1.61	0.00090617	-0.49526	-0.00027874	1.1148	0.00062743	562.8214597254275	58.409	0.30168	60.378	60.214	60.516	1.969					14	9	2	0	0	0	0.075994	2	24484	24484;24536		57.722	19.748	1	3941300			23951	5180	11898	11951	27592;27593	27592					0.07087773171224399
NYIRITSEI	9	Unmodified	_NYIRITSEI_					0	0	0		nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8057739138603	2	554.803488	1107.59242	2.2501	0.0012483	-0.4489	-0.00024905	1.8012	0.00099929	554.8038546368001	40.901	0.50324	42.226	42.084	42.587	1.3254					34	15	3	0	0	0	0.050451	2	17173	17123;17173		67.838	24.066	1	1936100			23952	1131	11899	11952	27594;27595	27595					0.0429311064342528
NYIRITSEI	9	Unmodified	_NYIRITSEI_					0	0	0		nc|ENSG00000089876|Q7L7V1-2|DHX32;ENSG00000089876|ENST00000284690|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	nc|ENSG00000089876|Q7L7V1-2|DHX32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8043701052666	2	554.803488	1107.59242	2.0549	0.0011401	0.17241	9.5656E-05	2.2273	0.0012357	554.8033574330035	40.544	0.31581	42.407	42.201	42.517	1.8624					16	9	2	0	0	0	0.1052	2	16964	16964;17017		47.594	14.809	1	1712100			23953	1131	11899	11952	27596;27597	27596					0.0429311064342528
NYISDPTILW	10	Unmodified	_NYISDPTILW_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3118774294853	2	611.311146	1220.60774	2.4383	0.0014906	-0.57073	-0.0003489	1.8676	0.0011417	611.310603926523	78.082	0.48106	79.363	79.167	79.649	1.2809					43	15	3	0	0	0	0.048317	2	32755	32755;32805		99.755	61.781	1	10890000			23954	820	11900	11953	27598;27599	27598					0.006259774406316865
NYISDPTILW	10	Unmodified	_NYISDPTILW_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3108398318291	2	611.311146	1220.60774	1.2624	0.00077172	-1.2977	-0.0007933	-0.035312	-2.1587E-05	611.3103583431135	77.614	0.45478	79.366	79.167	79.622	1.7514					38	14	3	0	0	0	0.045213	2	32527	32527;32580		99.755	61.604	1	9610100			23955	820	11900	11953	27600;27601	27600					0.006259774406316865
NYISEFLRL	9	Unmodified	_NYISEFLRL_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8154785037041	2	577.813856	1153.61316	2.4381	0.0014088	2.0384	0.0011778	4.4765	0.0025866	577.8144024038799	78.101	0.66691	79.382	78.949	79.616	1.2809					42	21	3	0	0	0	0.086433	1	32781	32781		53.833	13.384	1	3225200			23956	4938	11901	11954	27602	27602					0.04249701023081798
NYISEFLRL	9	Unmodified	_NYISEFLRL_					0	0	0		ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	ENSG00000196440|ENST00000423738|ARMCX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8148681521416	2	577.813856	1153.61316	1.2183	0.00070395	1.2558	0.0007256	2.4741	0.0014295	577.8142098822979	77.584	0.33092	79.335	79.136	79.467	1.7514					20	10	3	0	0	0	0.044893	1	32531	32531		71.922	28.064	1	3214500			23957	4938	11901	11954	27603	27603					0.04249701023081798
NYISGIQTI	9	Unmodified	_NYISGIQTI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7715942263603	2	504.771657	1007.52876	0.86935	0.00043882	0.6716	0.00033901	1.541	0.00077783	504.77158446796795	51.211	0.39931	52.605	52.437	52.836	1.3938					33	12	3	0	0	0	0.0006934	3	21470	21423;21470;21513		134.3	38.185	1	11270000			23958	4895	11902	11955	27604;27605;27606	27605					0.025297502063381216
NYISGIQTI	9	Unmodified	_NYISGIQTI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1008.538012683392	1	1008.53604	1007.52876	0.6382	0.00064365	0.045872	4.6263E-05	0.68407	0.00068991	1008.5364069633483	51.242	0.39931	52.636	52.437	52.836	1.3938					18	12	2	0	0	0	0.029061	1	21437	21437		88.954	28.564	1	2749400			23959	4895	11902	11955	27607	27607					0.025297502063381216
NYISGIQTI	9	Unmodified	_NYISGIQTI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7719299197197	2	504.771657	1007.52876	0.21922	0.00011066	0.96634	0.00048778	1.1856	0.00059844	504.771921182349	50.703	0.33578	52.679	52.515	52.851	1.9753					30	10	4	0	0	0	0.010279	3	21249	21204;21249;21294		107.19	35.265	1	13189000			23960	4895	11902	11955	27608;27609;27610	27609					0.025297502063381216
NYISGIQTI	9	Unmodified	_NYISGIQTI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.535388171673	1	1008.53604	1007.52876	0.45346	0.00045733	1.3285	0.0013399	1.782	0.0017972	1008.5370939791027	50.706	0.30478	52.682	52.546	52.851	1.9753					19	9	3	0	0	0	0.026734	1	21228	21228		92.653	32.264	1	2270200			23961	4895	11902	11955	27611	27611					0.025297502063381216
NYITAALKL	9	Unmodified	_NYITAALKL_					0	0	0		ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.8029662966728	2	503.800217	1005.58588	2.6651	0.0013427	1.6094	0.00081081	4.2745	0.0021535	503.8015216895138	59.504	0.43775	60.923	60.708	61.146	1.4196					29	13	3	0	0	0	0.10478	2	24939	24939;24992		60.074	14.053	1	3096000			23962	2841	11903	11956	27612;27613	27612					0.08331217482702868
NYITAALKL	9	Unmodified	_NYITAALKL_					0	0	0		ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	ENSG00000138641|ENST00000402738|HERC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.8038818240166	2	503.800217	1005.58588	2.2967	0.0011571	3.0281	0.0015256	5.3249	0.0026827	503.8022623730861	59.018	0.37853	60.987	60.784	61.162	1.969					25	11	3	0	0	0	0.16434	1	24729	24729		47.749	7.7914	1	2128900			23963	2841	11903	11956	27614	27614					0.08331217482702868
NYITPNPIFF	10	Unmodified	_NYITPNPIFF_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3164550662041	2	613.316232	1224.61791	2.5893	0.0015881	-0.63087	-0.00038692	1.9585	0.0012012	613.3149190477312	83.011	0.33533	84.215	84.006	84.342	1.2037					22	10	3	0	0	0	0.05359	1	34824	34824		89.401	61.772	1	1384300			23964	2881	11904	11957	27615	27615					0.014585851658239335
NYITPNPIFF	10	Unmodified	_NYITPNPIFF_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	613.316232	1224.61791	2.9265	0.0017949	1.8825	0.0011546	4.809	0.0029495	613.317680428248	82.488	0.34012	84.158	83.954	84.294	1.67	-0.028136	0.002259	NaN	89.401	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1604100			23965	2881	11904	11957							0.014585851658239335
NYKKFYEQF	9	Unmodified	_NYKKFYEQF_					0	0	0		nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.8772155642509	3	422.876634	1265.60807	0.77079	0.00032595	1.0869	0.00045965	1.8577	0.00078559	422.8770718775211	30.141	1.0865	31.423	31.193	32.279	1.2825					80	34	4	0	0	0	0.16939	4	12639	12590;12639;12746;12799		36.506	19.94	1	11750000			23966	1010	11905	11958	27616;27617;27618;27619	27617					-0.014106028395417525
NYKKFYEQF	9	Unmodified	_NYKKFYEQF_					0	0	0		nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.8121215701103	2	633.811313	1265.60807	0.50173	0.000318	1.0679	0.00067683	1.5696	0.00099483	633.8119583373887	30.144	0.8659	31.427	31.193	32.059	1.2825					72	27	4	0	0	0	0.00033802	5	12641	12591;12641;12693;12748;12827		137.42	91.684	1	7329500			23967	1010	11905	11958	27620;27621;27622;27623;27624	27621					-0.014106028395417525
NYKKFYEQF	9	Unmodified	_NYKKFYEQF_					0	0	0		nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.8770324587822	3	422.876634	1265.60807	0.80496	0.0003404	0.54491	0.00023043	1.3499	0.00057083	422.87684997166104	29.662	1.0121	31.461	31.234	32.246	1.7987					82	32	4	0	0	0	0.25667	5	12425	12380;12425;12530;12582;12730		27.629	8.0028	1	11706000			23968	1010	11905	11958	27625;27626;27627;27628;27629	27626					-0.014106028395417525
NYKKFYEQF	9	Unmodified	_NYKKFYEQF_					0	0	0		nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8113281130791	2	633.811313	1265.60807	0.34597	0.00021928	0.66456	0.00042121	1.0105	0.00064049	633.8117303528841	29.677	0.73345	31.476	31.234	31.967	1.7987					56	23	3	0	0	0	0.0051619	5	12427	12381;12427;12479;12532;12584		134.3	92.34	1	7080500			23969	1010	11905	11958	27630;27631;27632;27633;27634	27631					-0.014106028395417525
NYKLTSITF	9	Unmodified	_NYKLTSITF_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7949706912041	2	543.795132	1085.57571	1.2732	0.00069238	-1.1665	-0.00063433	0.10677	5.8059E-05	543.7944759088334	50.847	0.23808	52.241	52.078	52.316	1.3938					13	7	2	0	0	0	0.037098	1	21264	21264		78.728	48.092	1	2037300			23970	2616	11906	11959	27635	27635					0.036346097574551095
NYKLTSITF	9	Unmodified	_NYKLTSITF_					0	0	0		nc|ENSG00000134444|Q9P260|RELCH;ENSG00000134444|ENST00000644646|RELCH;nc|ENSG00000134444|Q9P260-2|RELCH	nc|ENSG00000134444|Q9P260|RELCH	nc|ENSG00000134444|Q9P260|RELCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7960082888603	2	543.795132	1085.57571	1.4736	0.00080131	0.032658	1.7759E-05	1.5062	0.00081907	543.7946609786069	50.277	0.2674	52.254	52.099	52.367	1.9772					13	8	2	0	0	0	0.20671	1	21031	21031		32.305	3.8186	1	2482100			23971	2616	11906	11959	27636	27636					0.036346097574551095
NYLDQIAKF	9	Unmodified	_NYLDQIAKF_					0	0	0		KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant;KDM5C|p.L564Pfs*58|1|0.44|ENSG00000126012|chrX:53210471-53210472|-/A|frameshift_variant;KDM5C|p.V913Wfs*22|1|0.79|ENSG00000126012|chrX:53196930-53196930|C/-|frameshift_variant;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C;ENSG00000126012|ENST00000375401|KDM5C;nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D	KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant;nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2930786013603	2	556.292756	1110.57096	1.7844	0.00099265	-0.42473	-0.00023628	1.3597	0.00075637	556.2925868181537	58.902	0.4929	60.321	59.974	60.467	1.4196					34	15	3	0	0	0	0.00013275	2	24705	24655;24705		145.13	73.996	1	6396000			23972	7664;579	11907	11960	27637;27638	27638					0.02009725614720992
NYLDQIAKF	9	Unmodified	_NYLDQIAKF_					0	0	0		KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant;KDM5C|p.L564Pfs*58|1|0.44|ENSG00000126012|chrX:53210471-53210472|-/A|frameshift_variant;KDM5C|p.V913Wfs*22|1|0.79|ENSG00000126012|chrX:53196930-53196930|C/-|frameshift_variant;nc|ENSG00000126012|P41229-2|KDM5C;nc|ENSG00000126012|P41229-5|KDM5C;ENSG00000126012|ENST00000375401|KDM5C;nc|ENSG00000012817|Q9BY66-2|KDM5D;ENSG00000012817|ENST00000317961|KDM5D;nc|ENSG00000012817|Q9BY66-3|KDM5D	KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant;nc|ENSG00000012817|Q9BY66-2|KDM5D	nc|ENSG00000012817|Q9BY66-2|KDM5D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2933227419853	2	556.292756	1110.57096	1.4534	0.00080851	0.18885	0.00010506	1.6422	0.00091356	556.2928276369821	58.361	0.5853	60.33	59.901	60.487	1.969					33	18	3	0	0	0	0.019432	2	24519	24469;24519		99.799	38.441	1	6042400			23973	7664;579	11907	11960	27639;27640	27640					0.02009725614720992
NYLDRFLSL	9	Unmodified	_NYLDRFLSL_					0	0	0		ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8069335818291	2	570.806031	1139.59751	3.3412	0.0019072	-3.9547	-0.0022574	-0.61353	-0.00035021	570.8048694083965	74.426	0.57072	75.744	75.5	76.07	1.318					69	18	5	0	0	0	0.0025633	3	31266	31177;31226;31266		128.93	63.697	1	12854000			23974	1696	11908	11961	27641;27642;27643	27643					0.03329414506060857
NYLDRFLSL	9	Unmodified	_NYLDRFLSL_					0	0	0		ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	ENSG00000110092|ENST00000227507|CCND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8065063357353	2	570.806031	1139.59751	3.0385	0.0017344	-4.3878	-0.0025046	-1.3493	-0.0007702	570.8049926971729	73.987	0.64165	75.783	75.44	76.082	1.7962					67	20	5	0	0	0	0.0025633	3	30992	30944;30992;31047		128.93	52.526	1	10227000			23975	1696	11908	11961	27644;27645;27646	27645					0.03329414506060857
NYLDWLTSI	9	Unmodified	_NYLDWLTSI_					0	0	0		ENST00000587552.5_1_19:5696605-5708411:-|nuORF;ENST00000590558.5_1_19:5692045-5712033:-|nuORF;nc|ENSG00000196365|P36776-3|LONP1;nc|ENSG00000196365|P36776-2|LONP1;ENSG00000196365|ENST00000360614|LONP1	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.7882568240166	2	562.784764	1123.55498	3.2614	0.0018354	2.1217	0.0011941	5.3831	0.0030295	562.7862034507338	96.16	0.14765	96.562	96.461	96.609	0.40208					7	4	2	0	0	0	0.091139	1	40447	40447		52.268	22.044	1	1679600			23976	4934	11909	11962	27647	27647					-0.0018598062217733968
NYLFYFVY	8	Unmodified	_NYLFYFVY_					0	0	0			REV__GJB6|p.E187Dfs*11|1|0.07|ENSG00000121742|chr13:20222920-20222921|-/AGGCTACAGAAGGAACTTTCAGGTTGGTA|frameshift_variant	REV__GJB6|p.E187Dfs*11|1|0.07|ENSG00000121742|chr13:20222920-20222921|-/AGGCTACAGAAGGAACTTTCAGGTTGGTA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.8508788943291	3	376.851538	1127.53278	0.35162	0.00013251	-2.497	-0.000941	-2.1454	-0.0008085	376.8505934596232	53.485	0.23784	55.455	55.325	55.563	1.9697					9	7	2	0	0	0	0.88958	1	22384	22384		1.8442	0.10196	1	3044000	+		23977	9594	11910	11963	27648	27648					-0.025881602999561437
NYLHLDYNF	9	Unmodified	_NYLHLDYNF_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;ENST00000573716.1_1_17:1581802-1582496:-|nuORF	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7811767458916	2	599.780013	1197.54547	0.4555	0.0002732	0.96571	0.00057921	1.4212	0.00085241	599.7806312461639	57.643	0.13195	59.061	59.014	59.146	1.4181					15	10	2	0	0	0	0.040497	1	24169	24169		75.761	45.124	1	6812300			23978	4323	11911	11964	27649	27649					-0.04539748907723151
NYLLNPVNTF	10	Unmodified	_NYLLNPVNTF_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;ENST00000532094.5_1_11:420655-431830:-|nuORF	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8145629763603	2	597.811313	1193.60807	2.8998	0.0017335	1.415	0.00084592	4.3148	0.0025795	597.811781640351	70.122	0.31215	71.476	71.304	71.616	1.3536					15	9	2	0	0	0	0.063958	1	29428	29428		99.799	63.672	1	1679800			23979	4734	11912	11965	27650	27650					0.019013971604636026
NYLLNPVNTF	10	Unmodified	_NYLLNPVNTF_					0	0	0		nc|ENSG00000185101|A1A5B4-2|ANO9;ENST00000534161.5_1_11:418373-429524:-|nuORF;ENST00000526142.5_1_11:419653-429752:-|nuORF;ENST00000528927.5_1_11:418373-431830:-|nuORF;ENSG00000185101|ENST00000332826|ANO9;ENST00000532094.5_1_11:420655-431830:-|nuORF	nc|ENSG00000185101|A1A5B4-2|ANO9	nc|ENSG00000185101|A1A5B4-2|ANO9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	597.811313	1193.60807	2.6516	0.0015852	-0.23139	-0.00013832	2.4202	0.0014468	597.8111370200954	69.647	0.22091	71.5	71.356	71.577	1.853	0.012372	-0.0013226	NaN	99.799	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1125700			23980	4734	11912	11965							0.019013971604636026
NYLLTYGAIG	10	Unmodified	_NYLLTYGAIG_					0	0	0			REV__tr|A0A553SKJ7|A0A553SKJ7_NIACIFructose-1,6-bisphosphataseclass3OS=NialliacirculansOX=1397GN=fbpPE=3SV=1	REV__tr|A0A553SKJ7|A0A553SKJ7_NIACIFructose-1,6-bisphosphataseclass3OS=NialliacirculansOX=1397GN=fbpPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.7939330935478	2	542.787307	1083.56006	2.4553	0.0013327	2.5138	0.0013645	4.9691	0.0026972	542.7875466274508	47.843	0.49258	49.819	49.435	49.928	1.976					24	15	2	0	0	0	0.22411	1	19990	19990		46.021	0	1	2596600	+		23981	14957	11913	11966	27651	27651					0.02162323240418118
NYLLTYGAIG	10	Unmodified	_NYLLTYGAIG_					0	0	0			REV__tr|A0A553SKJ7|A0A553SKJ7_NIACIFructose-1,6-bisphosphataseclass3OS=NialliacirculansOX=1397GN=fbpPE=3SV=1	REV__tr|A0A553SKJ7|A0A553SKJ7_NIACIFructose-1,6-bisphosphataseclass3OS=NialliacirculansOX=1397GN=fbpPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.2796508669853	2	542.787307	1083.56006	2.4553	0.0013327	2.5138	0.0013645	4.9691	0.0026972	542.7875466274508	47.843	0.49258	49.819	49.435	49.928	1.976					24	15	2	0	0	0	0.12083	1	20050	20050		37.974	0	1	2596600	+		23982	14957	11913	11966	27652	27652					0.02162323240418118
NYLPAINGIVF	11	Unmodified	_NYLPAINGIVF_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000152700|ENST00000402673|SAR1B;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.8422729372978	2	610.837331	1219.66011	5.0736	0.0030991	0.58671	0.00035839	5.6603	0.0034575	610.8369713578196	87.98	0.28626	89.036	88.89	89.176	1.0562					20	8	4	0	0	0	0.031246	1	37107	37107		78.728	48.092	1	2698000			23983	990	11914	11967	27653	27653					0.05906560574226205
NYLPAINGIVF	11	Unmodified	_NYLPAINGIVF_					0	0	0		nc|ENSG00000079332|Q9NR31-2|SAR1A;ENSG00000152700|ENST00000402673|SAR1B;ENSG00000079332|ENST00000373241|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	nc|ENSG00000079332|Q9NR31-2|SAR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.8408691287041	2	610.837331	1219.66011	4.6307	0.0028286	1.2989	0.0007934	5.9296	0.003622	610.8382041144895	87.631	0.31744	89.126	88.919	89.236	1.4953					18	9	2	0	0	0	0.11083	1	36911	36911		53.833	41.592	1	1859400			23984	990	11914	11967	27654	27654					0.05906560574226205
NYLSHHLTI	9	Unmodified	_NYLSHHLTI_					0	0	0		nc|ENSG00000172239|Q9H074-3|PAIP1;nc|ENSG00000172239|Q9H074-2|PAIP1;ENST00000447794.1_1_17:18553574-18554852:+|nuORF;ENSG00000172239|ENST00000306846|PAIP1;PAIP1-FBXO38|1|fusion;PAIP1-FBXO38|2|fusion;PAIP1-FBXO38|3|fusion	nc|ENSG00000172239|Q9H074-3|PAIP1	nc|ENSG00000172239|Q9H074-3|PAIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.5302612185478	3	366.529458	1096.56654	-0.22645	-8.2999E-05	1.2317	0.00045146	1.0053	0.00036846	366.52987983819673	29.959	0.49133	31.241	31.072	31.564	1.2825					34	15	3	0	0	0	0.22861	1	12574	12574		29.841	19.017	1	6296600			23985	4231	11915	11968	27655	27655					0.022122611917893664
NYLSHHLTI	9	Unmodified	_NYLSHHLTI_					0	0	0		nc|ENSG00000172239|Q9H074-3|PAIP1;nc|ENSG00000172239|Q9H074-2|PAIP1;ENST00000447794.1_1_17:18553574-18554852:+|nuORF;ENSG00000172239|ENST00000306846|PAIP1;PAIP1-FBXO38|1|fusion;PAIP1-FBXO38|2|fusion;PAIP1-FBXO38|3|fusion	nc|ENSG00000172239|Q9H074-3|PAIP1	nc|ENSG00000172239|Q9H074-3|PAIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2917358279228	2	549.290548	1096.56654	0.59416	0.00032637	0.05589	3.07E-05	0.65005	0.00035707	549.2907843875521	29.978	0.4293	31.261	31.042	31.471	1.2825					35	13	4	0	0	0	0.026411	1	12576	12576		81.89	51.665	1	3269200			23986	4231	11915	11968	27656	27656					0.022122611917893664
NYLSHHLTI	9	Unmodified	_NYLSHHLTI_					0	0	0		nc|ENSG00000172239|Q9H074-3|PAIP1;nc|ENSG00000172239|Q9H074-2|PAIP1;ENST00000447794.1_1_17:18553574-18554852:+|nuORF;ENSG00000172239|ENST00000306846|PAIP1;PAIP1-FBXO38|1|fusion;PAIP1-FBXO38|2|fusion;PAIP1-FBXO38|3|fusion	nc|ENSG00000172239|Q9H074-3|PAIP1	nc|ENSG00000172239|Q9H074-3|PAIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.5291015505791	3	366.529458	1096.56654	0.44465	0.00016298	-1.0214	-0.00037439	-0.57679	-0.00021141	366.52909049650805	29.512	0.45564	31.31	31.082	31.538	1.7987					32	14	3	0	0	0	0.52273	1	12360	12360		14.405	0.79051	1	4197400			23987	4231	11915	11968	27657	27657					0.022122611917893664
NYLSHHLTI	9	Unmodified	_NYLSHHLTI_					0	0	0		nc|ENSG00000172239|Q9H074-3|PAIP1;nc|ENSG00000172239|Q9H074-2|PAIP1;ENST00000447794.1_1_17:18553574-18554852:+|nuORF;ENSG00000172239|ENST00000306846|PAIP1;PAIP1-FBXO38|1|fusion;PAIP1-FBXO38|2|fusion;PAIP1-FBXO38|3|fusion	nc|ENSG00000172239|Q9H074-3|PAIP1	nc|ENSG00000172239|Q9H074-3|PAIP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.290548	1096.56654	0.745	0.00040922	-1.3377	-0.00073477	-0.59267	-0.00032555	549.2900571120675	29.484	0.42448	31.283	31.082	31.506	1.7987	0.01111	-0.00054436	NaN	81.89	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2426200			23988	4231	11915	11968							0.022122611917893664
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.5576965212822	3	396.557236	1186.64988	0.42201	0.00016735	-0.4873	-0.00019324	-0.065293	-2.5892E-05	396.55703149624475	55.564	1.472	56.974	56.616	58.088	1.4099					137	63	4	0	0	0	0.046715	8	23270	23173;23219;23270;23313;23357;23402;23465;23585		70.332	28.399	1	163320000			23989	594	11916	11969	27658;27659;27660;27661;27662;27663;27664;27665	27660					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.3319579958916	2	594.332216	1186.64988	0.9669	0.00057466	-0.80444	-0.0004781	0.16246	9.6555E-05	594.331736136826	55.617	0.77155	57.027	56.616	57.387	1.4099					106	35	4	0	0	0	4.9851E-05	6	23326	23188;23231;23283;23326;23365;23408		171.09	76.167	1	89080000			23990	594	11916	11969	27666;27667;27668;27669;27670;27671	27669					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.5577880740166	3	396.557236	1186.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.751	1	58.166	57.666	58.666	1.4145								0	0	0	0.39799	1	23785	23785		8.9762	2.7844	1				23991	594	11916	11969	27672	27672					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.5570861697197	3	396.557236	1186.64988	0.12807	5.0788E-05	0.12059	4.7822E-05	0.24866	9.8609E-05	396.5573195259121	55.092	0.82052	57.061	56.722	57.543	1.9684					127	38	5	0	0	0	0.042285	7	23188	23000;23047;23099;23143;23188;23235;23273		74.2	30.218	1	136860000			23992	594	11916	11969	27673;27674;27675;27676;27677;27678;27679	27677					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.3315307497978	2	594.332216	1186.64988	0.32364	0.00019235	0.1357	8.0652E-05	0.45934	0.000273	594.3322806399566	55.081	0.62094	57.05	56.779	57.4	1.9684					90	28	5	0	0	0	1.6433E-05	5	23197	23017;23062;23113;23154;23197		214.41	114.61	1	65557000			23993	594	11916	11969	27680;27681;27682;27683;27684	27684					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.8919860720634	3	396.557236	1186.64988	0.59832	0.00023727	-0.40557	-0.00016083	0.19276	7.6439E-05	396.5570438010812	55.704	0.54395	57.672	57.543	58.087	1.9684					36	19	2	0	0	0	0.24056	3	23331	23331;23376;23446		28.495	5.2154	1	4862600			23994	594	11916	11969	27685;27686;27687	27685					0.06401997639636647
NYLSIFRKF	9	Unmodified	_NYLSIFRKF_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	594.3316528201103	2	594.332216	1186.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.418	1	57.386	56.886	57.886	1.9684								0	0	0	2.98E-11	1	23238	23238		155.03	51.278	1				23995	594	11916	11969	27688	27688					0.06401997639636647
NYLTKIYGL	9	Unmodified	_NYLTKIYGL_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8052856326103	2	542.8055	1083.59645	1.6302	0.00088491	-1.4378	-0.00078046	0.19242	0.00010445	542.8045305806206	54.67	0.34143	56.075	55.899	56.24	1.4048					18	10	2	0	0	0	0.033504	2	22849	22849;22895		81.89	45.763	1	4429000			23996	4328	11917	11970	27689;27690	27689					0.05799200137153093
NYLTKIYGL	9	Unmodified	_NYLTKIYGL_					0	0	0		ENSG00000174348|ENST00000312553|PODN;nc|ENSG00000174348|Q7Z5L7-2|PODN;nc|ENSG00000174348|Q7Z5L7-3|PODN	ENSG00000174348|ENST00000312553|PODN	ENSG00000174348|ENST00000312553|PODN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8038818240166	2	542.8055	1083.59645	1.8318	0.00099432	-1.7114	-0.00092896	0.12042	6.5366E-05	542.8044059858306	54.173	0.37955	56.142	55.938	56.318	1.9684					19	11	2	0	0	0	0.073578	1	22673	22673		58.679	29.597	1	3941000			23997	4328	11917	11970	27691	27691					0.05799200137153093
NYLVLPNRI	9	Unmodified	_NYLVLPNRI_					0	0	0		ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.3252441287041	2	551.324391	1100.63423	0.90339	0.00049806	0.5104	0.00028139	1.4138	0.00077946	551.324718766379	52.332	0.43847	53.729	53.46	53.898	1.3966					39	13	4	0	0	0	0.037761	2	21911	21862;21911		78.149	20.378	1	9123900			23998	2025	11918	11971	27692;27693	27693					0.08793711122621062
NYLVLPNRI	9	Unmodified	_NYLVLPNRI_					0	0	0		ENSG00000117868|ENST00000275418|ESYT2;nc|ENSG00000117868|A0FGR8-2|ESYT2;nc|ENSG00000117868|A0FGR8|ESYT2;nc|ENSG00000117868|A0FGR8-6|ESYT2;nc|ENSG00000117868|A0FGR8-4|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	ENSG00000117868|ENST00000275418|ESYT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.3251830935478	2	551.324391	1100.63423	0.80657	0.00044468	0.94947	0.00052347	1.756	0.00096815	551.3247522536474	51.723	0.46632	53.696	53.426	53.892	1.9722					37	14	3	0	0	0	0.042029	2	21690	21637;21690		74.423	22.154	1	8804800			23999	2025	11918	11971	27694;27695	27695					0.08793711122621062
NYLVRINEI	9	Unmodified	_NYLVRINEI_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8207275271416	2	567.319306	1132.62406	1.9563	0.0011099	-1.3109	-0.00074368	0.64547	0.00036619	567.8197841422124	48.044	0.44001	49.432	49.178	49.618	1.388					35	13	3	0	0	0	0.031145	1	20108	20108		85.642	17.561	1	3935100			24000	2688	11919	11972	27696	27696					0.06305103397380662
NYLVRINEI	9	Unmodified	_NYLVRINEI_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8206054568291	2	567.319306	1132.62406	2.6073	0.0014792	-2.4027	-0.0013631	0.20462	0.00011609	567.8192913395621	47.536	0.431	49.512	49.282	49.713	1.976					37	13	3	0	0	0	0.070055	2	19913	19913;19970		60.074	10.141	1	4577900			24001	2688	11919	11972	27697;27698	27697					0.06305103397380662
NYMEVVSLL	9	Oxidation (M)	_NYM(Oxidation (M))EVVSLL_		NYM(1)EVVSLL		NYM(85)EVVSLL	0	0	1		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2739135622978	2	542.273175	1082.5318	2.1205	0.0011499	-0.44188	-0.00023962	1.6786	0.00091026	542.2731351146062	68.161	0.553	69.539	69.213	69.766	1.3778					60	17	4	0	0	0	0.031377	1	28620	28620		85.272	45.315	1	2998700			24002	1898	11920	11973	27699	27699		35			-0.006167427311538631
NYMEVVSLL	9	Oxidation (M)	_NYM(Oxidation (M))EVVSLL_		NYM(1)EVVSLL		NYM(56)EVVSLL	0	0	1		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2737914919853	2	542.273175	1082.5318	1.7191	0.00093223	-0.79218	-0.00042958	0.92693	0.00050265	542.2725543776519	67.634	0.65048	69.504	69.176	69.827	1.87					47	20	3	0	0	0	0.079895	1	28386	28386		56.177	20.133	1	2687000			24003	1898	11920	11973	27700	27700		35			-0.006167427311538631
NYMEVVSLL	9	Unmodified	_NYMEVVSLL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.2779418826103	2	534.275718	1066.53688	3.1739	0.0016957	1.1101	0.00059312	4.2841	0.0022889	534.2764043315701	82.488	0.42835	84.158	83.986	84.415	1.67					47	13	5	0	0	0	0.01454	2	34630	34580;34630		103.75	48.633	1	28752000			24004	1898	11920	11974	27701;27702	27702					0.006275611314777052
NYMEVVSLL	9	Unmodified	_NYMEVVSLL_					0	0	0		nc|ENSG00000115159|P43304-2|GPD2;ENSG00000115159|ENST00000438166|GPD2	nc|ENSG00000115159|P43304-2|GPD2	nc|ENSG00000115159|P43304-2|GPD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	534.275718	1066.53688	2.8001	0.001496	0.28705	0.00015337	3.0871	0.0016494	534.2758801947351	83.002	0.49365	84.215	83.951	84.445	1.2125	0.028169	-0.00039886	NaN	103.75	54	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16923000			24005	1898	11920	11974							0.006275611314777052
NYMPGQLTI	9	Unmodified	_NYMPGQLTI_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1389037966728	2	518.760235	1035.50592	2.0199	0.0010478	-1.0935	-0.00056724	0.92645	0.00048061	518.7598837178264	56.788	0.42905	58.203	58.033	58.462	1.4145					30	13	3	0	0	0	0.097511	1	23771	23771		23.148	18.819	1	5444600			24006	4663	11921	11975	27703	27703					-0.010415921827643615
NYMPGQLTI	9	Unmodified	_NYMPGQLTI_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1036.514208972454	1	1036.51319	1035.50592	1.9583	0.0020298	-1.089	-0.0011288	0.86926	0.000901	1036.5129697100176	56.32	0.24728	58.289	58.117	58.364	1.9684					13	7	2	0	0	0	0.17276	1	23578	23578		36.127	14.38	1	2178500			24007	4663	11921	11975	27704	27704					-0.010415921827643615
NYMPGQLTI	9	Unmodified	_NYMPGQLTI_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.7614013552666	2	518.760235	1035.50592	1.1983	0.00062164	-0.42382	-0.00021986	0.7745	0.00040178	518.7601705075832	56.288	0.39878	58.257	58.057	58.456	1.9684					32	12	3	0	0	0	0.045797	1	23587	23587		71.134	47.985	1	5515500			24008	4663	11921	11975	27705	27705					-0.010415921827643615
NYMPGQLTI	9	Unmodified	_NYMPGQLTI_					0	0	0		ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	ENSG00000183742|ENST00000400331|MACC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1036.51319	1035.50592	1.2024	0.0012463	-0.13461	-0.00013952	1.0678	0.0011068	1036.5119155853747	56.785	0.30721	58.199	58.093	58.4	1.4145	-0.044811	0.00056008	NaN	36.127	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2629200			24009	4663	11921	11975							-0.010415921827643615
NYMTKFLSDR	10	Unmodified	_NYMTKFLSDR_					0	0	0		nc|ENSG00000160200|P35520-2|CBS;ENSG00000160200|ENST00000398165|CBS	nc|ENSG00000160200|P35520-2|CBS	nc|ENSG00000160200|P35520-2|CBS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	637.8127929568291	2	637.81353	1273.61251	2.1067	0.0013437	-2.8231	-0.0018006	-0.71643	-0.00045695	638.3131121754269	77	0.43915	77	76.688	77.127	0					20	13	2	0	0	0	0.8882	1	32021	32021		2.7352	1.0826	1	559190			24010	3545	11922	11976	27706	27706					-0.013354616882679693
NYNDGANECTF	11	Unmodified	_NYNDGANECTF_					0	0	0			REV__nc|ENSG00000150556|Q8NI32|LYPD6B	REV__nc|ENSG00000150556|Q8NI32|LYPD6B	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.2375976443291	2	624.23531	1246.45607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.598	1	72.939	72.439	73.439	1.3415								0	0	0	0.63775	1	30050	30050		1.4819	0.68827	1		+		24011	10382	11923	11977	27707	27707					-0.15730371649419794
NYNDGANECTF	11	Unmodified	_NYNDGANECTF_					0	0	0			REV__nc|ENSG00000150556|Q8NI32|LYPD6B	REV__nc|ENSG00000150556|Q8NI32|LYPD6B	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2366210818291	2	624.23531	1246.45607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.152	1	72.976	72.476	73.476	1.824								0	0	0	0.63775	1	29853	29853		3.2813	1.2216	1		+		24012	10382	11923	11977	27708	27708					-0.15730371649419794
NYNDGANECTF	11	Unmodified	_NYNDGANECTF_					0	0	0			REV__nc|ENSG00000150556|Q8NI32|LYPD6B	REV__nc|ENSG00000150556|Q8NI32|LYPD6B	MSMS	GG20161007_CRH_Patient100_W632_02	4	624.2357055544853	2	624.23531	1246.45607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.462	1	78.23	77.73	78.73	1.7672								0	0	0	0.63775	1	32077	32077		1.4819	0.68827	1		+		24013	10382	11923	11977	27709	27709					-0.15730371649419794
NYNFDFRSW	9	Unmodified	_NYNFDFRSW_					0	0	0		ENST00000492084.5_1_6:31654991-31670409:-|nuORF;nc|ENSG00000204427|O95870-2|ABHD16A;ENSG00000204427|ENST00000395952|ABHD16A;ENST00000468037.1_1_6:31660724-31670409:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	624.7776977419853	2	624.775262	1247.53597	2.3974	0.0014979	0.45231	0.00028259	2.8498	0.0017805	624.774849665723	60.197	0.33007	61.617	61.449	61.779	1.4196					23	10	3	0	0	0	0.099302	1	25280	25280		49.554	24.155	1	1800000			24014	5142	11924	11978	27710	27710					-0.07789517193236861
NYNFDFRSW	9	Unmodified	_NYNFDFRSW_					0	0	0		ENST00000492084.5_1_6:31654991-31670409:-|nuORF;nc|ENSG00000204427|O95870-2|ABHD16A;ENSG00000204427|ENST00000395952|ABHD16A;ENST00000468037.1_1_6:31660724-31670409:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	ENST00000492084.5_1_6:31654991-31670409:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.7771484255791	2	624.775262	1247.53597	2.3393	0.0014615	1.2224	0.00076374	3.5617	0.0022253	624.774839463783	59.657	0.33076	61.626	61.495	61.826	1.969					22	10	3	0	0	0	0.053939	1	25046	25046		66.457	46.042	1	2080500			24015	5142	11924	11978	27711	27711					-0.07789517193236861
NYNWDEYSL	9	Unmodified	_NYNWDEYSL_					0	0	0			REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1	REV__nc|ENSG00000172139|Q4G0N8-2|SLC9C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.7535278201103	2	602.251286	1202.48802	3.3069	0.0019916	-1.293	-0.00077869	2.014	0.0012129	602.2506243075422	94.38	0.43813	95.569	95.335	95.773	1.1887					66	13	7	0	0	0	0.70108	1	39650	39650		7.2892	0.18751	1	8874800	+		24016	11057	11925	11979	27712	27712					-0.10512635903955925
NYPDEFTKL	9	Unmodified	_NYPDEFTKL_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;NF1-RAB11FIP4|4|fusion;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-3|NF1;NF1|p.R487Wfs*2|1|0.04|ENSG00000196712|chr17:31214515-31214542|CAAGAAGCTATAAGTATCTTCTCTTGTC/-|frameshift_variant;NF1|p.A463Hfs*10|1|0.71|ENSG00000196712|chr17:31206365-31206365|G/-|frameshift_variant;NF1|p.T467Nfs*3|1|0.61|ENSG00000196712|chr17:31214456-31214457|-/A|frameshift_variant	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7756225466728	2	563.774396	1125.53424	2.3766	0.0013399	-1.0026	-0.00056526	1.374	0.00077463	563.7736613282839	40.536	0.31277	41.846	41.695	42.008	1.3102					16	9	2	0	0	0	0.33297	1	17017	17017		23.79	13.716	1	1213200			24017	4961	11926	11980	27713	27713					-0.02350571001852586
NYPDEFTKL	9	Unmodified	_NYPDEFTKL_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;NF1|p.C1016Vfs*3|1|0.76|ENSG00000196712|chr17:31230314-31230314|G/-|frameshift_variant;NF1|p.V2096Cfs*24|1|0.79|ENSG00000196712|chr17:31336771-31336772|-/T|frameshift_variant;NF1-RAB11FIP4|3|fusion;NF1-RAB11FIP4|2|fusion;NF1|p.M1949Ifs*2|1|0.67|ENSG00000196712|chr17:31334870-31334888|ATGACTCCATGGCTGTCAA/-|frameshift_variant;nc|ENSG00000196712|P21359-4|NF1;NF1|p.S1159Tfs*3|1|0.22|ENSG00000196712|chr17:31232859-31232871|CAGTGGTCTCATG/-|frameshift_variant;NF1|p.M817Cfs*4|1|0.76|ENSG00000196712|chr17:31229063-31229063|A/-|frameshift_variant;NF1-RAB11FIP4|4|fusion;ENST00000495910.6_1_17:29490228-29576996:+|nuORF;nc|ENSG00000196712|P21359-5|NF1;nc|ENSG00000196712|P21359-3|NF1;NF1|p.R487Wfs*2|1|0.04|ENSG00000196712|chr17:31214515-31214542|CAAGAAGCTATAAGTATCTTCTCTTGTC/-|frameshift_variant;NF1|p.A463Hfs*10|1|0.71|ENSG00000196712|chr17:31206365-31206365|G/-|frameshift_variant;NF1|p.T467Nfs*3|1|0.61|ENSG00000196712|chr17:31214456-31214457|-/A|frameshift_variant	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7747070193291	2	563.774396	1125.53424	1.9674	0.0011092	-0.23557	-0.00013281	1.7318	0.00097635	563.7740264890775	40.203	0.28062	42.065	41.862	42.143	1.8624					20	8	3	0	0	0	0.28372	1	16827	16827		26.268	11.43	1	1034400			24018	4961	11926	11980	27714	27714					-0.02350571001852586
NYPETLGRLLI	11	Unmodified	_NYPETLGRLLI_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENSG00000103184|ENST00000251170|SEC14L5	nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000103184|ENST00000251170|SEC14L5	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.8699828982353	2	644.86662	1287.71869	1.6798	0.0010832	1.5144	0.00097658	3.1942	0.0020598	644.8673342785756	66.113	0.45184	67.502	67.237	67.689	1.3888					32	14	3	0	0	0	0.16578	1	27727	27727		43.982	30.076	1	1287200			24019	2411;1420	11927	11981	27715	27715					0.08633617148734629
NYPETLGRLLI	11	Unmodified	_NYPETLGRLLI_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENSG00000103184|ENST00000251170|SEC14L5	nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000103184|ENST00000251170|SEC14L5	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.3682128787041	2	644.86662	1287.71869	1.6469	0.001062	1.0094	0.00065091	2.6562	0.0017129	645.3684889675425	65.604	0.43036	67.512	67.248	67.679	1.9085					21	13	2	0	0	0	0.15597	1	27530	27530		45.74	27.594	1	1799400			24020	2411;1420	11927	11981	27716	27716					0.08633617148734629
NYPPQYLILKL	11	Unmodified	_NYPPQYLILKL_					0	0	0		ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF	ENSG00000128585|ENST00000352689|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	681.3973266482353	2	681.395013	1360.77547	1.8543	0.0012635	1.023	0.00069709	2.8773	0.0019606	681.3960531267858	72.109	0.4705	73.451	73.153	73.624	1.3415					33	14	3	0	0	0	0.46674	2	30246	30246;30300		24.991	13.496	1	2409100			24021	2373	11928	11982	27717;27718	27717					0.10951664705225994
NYPPQYLILKL	11	Unmodified	_NYPPQYLILKL_					0	0	0		ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF	ENSG00000128585|ENST00000352689|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	681.3956786990166	2	681.395013	1360.77547	1.559	0.0010623	0.54918	0.00037421	2.1082	0.0014365	681.3958702921209	71.555	0.50467	73.379	73.129	73.634	1.8239					29	15	3	0	0	0	0.46674	2	30025	30025;30075		24.991	13.496	1	1620500			24022	2373	11928	11982	27719;27720	27719					0.10951664705225994
NYQGHFHLF	9	Unmodified	_NYQGHFHLF_					0	0	0		ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.7758666872978	2	581.775065	1161.53558	2.0567	0.0011966	-0.75011	-0.0004364	1.3066	0.00076017	581.7746868048231	38.945	0.62931	40.242	40.007	40.636	1.2961					69	19	5	0	0	0	0.029061	5	16330	16286;16330;16367;16406;16446		109.63	90.898	1	40175000			24023	5709	11929	11983	27721;27722;27723;27724;27725	27722					-0.03872892122444682
NYQGHFHLF	9	Unmodified	_NYQGHFHLF_					0	0	0		ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1856567263603	3	388.185802	1161.53558	1.4709	0.00057099	-0.89516	-0.00034749	0.57576	0.0002235	388.1854595074592	39.007	0.72591	40.303	40.007	40.732	1.2961					81	22	5	0	0	0	0.22154	5	16315	16315;16354;16393;16432;16472		30.637	15.388	1	74961000			24024	5709	11929	11983	27726;27727;27728;27729;27730	27726					-0.03872892122444682
NYQGHFHLF	9	Unmodified	_NYQGHFHLF_					0	0	0		ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1861450076103	3	388.185802	1161.53558	0.86061	0.00033408	-0.017687	-6.8658E-06	0.84292	0.00032721	388.1858441280358	38.301	0.91424	40.138	39.805	40.719	1.8366					105	28	5	0	0	0	0.15635	6	16104	15981;16026;16065;16104;16143;16182		37.974	17.559	1	53215000			24025	5709	11929	11983	27731;27732;27733;27734;27735;27736	27734					-0.03872892122444682
NYQGHFHLF	9	Unmodified	_NYQGHFHLF_					0	0	0		ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	ENST00000283632.4_1_2:86968058-86968091:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.7758056521416	2	581.775065	1161.53558	1.0211	0.00059406	0.55471	0.00032272	1.5758	0.00091678	581.7754205954036	38.317	0.85389	40.153	39.865	40.719	1.8366					80	26	4	0	0	0	0.024001	6	16159	15991;16041;16079;16119;16159;16212		123.1	90.311	1	20389000			24026	5709	11929	11983	27737;27738;27739;27740;27741;27742	27741					-0.03872892122444682
NYQLRNGGKF	10	Unmodified	_NYQLRNGGKF_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|40|2|sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|40|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	599.2531005740166	2	598.812179	1195.60981	1.3177	0.00078905	-2.5711	-0.0015396	-1.2534	-0.00075058	598.8093746615949	79.895	0.28259	81.612	81.506	81.789	1.7167					12	8	2	0	0	0	0.12493	1	33560	33560		10.824	0	1	281430	+		24027	14250	11930	11984	27743	27743					0.019824509690806735
NYQRLFDFF	9	Unmodified	_NYQRLFDFF_					0	0	0		ENST00000560616.5_3_15:91450651-91453805:+|nuORF;MAN2A2|p.E478Gfs*12|1|0.12|ENSG00000196547|chr15:90910148-90910148|A/-|frameshift_variant;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;nc|ENSG00000196547|P49641-2|MAN2A2;MAN2A2|p.S842Lfs*8|1|0.14|ENSG00000196547|chr15:90912929-90912930|-/C|frameshift_variant;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|1|intron;nc|ENSG00000196547|P49641-1|MAN2A2;ENSG00000196547|ENST00000559717|MAN2A2;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|2|intron;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|3|intron	ENST00000560616.5_3_15:91450651-91453805:+|nuORF	ENST00000560616.5_3_15:91450651-91453805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.3059570193291	2	625.303655	1248.59276	2.2447	0.0014036	0.6664	0.0004167	2.9111	0.0018203	625.3039376633799	77.242	0.54251	78.523	78.281	78.823	1.2809					43	16	3	0	0	0	0.0080158	2	32402	32402;32458		110.67	65.354	1	2773200			24028	4946	11931	11985	27744;27745	27744					-0.021594696367174038
NYQRLFDFF	9	Unmodified	_NYQRLFDFF_					0	0	0		ENST00000560616.5_3_15:91450651-91453805:+|nuORF;MAN2A2|p.E478Gfs*12|1|0.12|ENSG00000196547|chr15:90910148-90910148|A/-|frameshift_variant;ENST00000560192.5_1_15:91447248-91454469:+|nuORF;nc|ENSG00000196547|P49641-2|MAN2A2;MAN2A2|p.S842Lfs*8|1|0.14|ENSG00000196547|chr15:90912929-90912930|-/C|frameshift_variant;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|1|intron;nc|ENSG00000196547|P49641-1|MAN2A2;ENSG00000196547|ENST00000559717|MAN2A2;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|2|intron;ENSG00000196547.15,MAN2A2,chr15,+,I1.1,90902527,90902694|104|4.61|3|intron	ENST00000560616.5_3_15:91450651-91453805:+|nuORF	ENST00000560616.5_3_15:91450651-91453805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.3050414919853	2	625.303655	1248.59276	1.7753	0.0011101	1.2984	0.00081191	3.0737	0.001922	625.3042129366225	76.663	0.5783	78.43	78.19	78.768	1.7672					39	17	3	0	0	0	0.024001	3	32137	32091;32137;32196		96.111	56.161	1	2459300			24029	4946	11931	11985	27746;27747;27748	27747					-0.021594696367174038
NYRDTFFNL	9	Unmodified	_NYRDTFFNL_					0	0	0		B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant;nc|ENSG00000170340|Q9NY97-2|B3GNT2;ENSG00000170340|ENST00000301998|B3GNT2	B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2850829958916	2	595.285463	1188.55637	0.49684	0.00029576	-0.297	-0.0001768	0.19984	0.00011896	595.2852268653614	57.739	0.39592	59.157	58.957	59.353	1.4181					63	30	3	0	0	0	0.0022704	3	24203	24158;24203;24247		129.77	78.917	1	27865000			24030	99	11932	11986	27749;27750;27751	27750					-0.030363465333948625
NYRDTFFNL	9	Unmodified	_NYRDTFFNL_					0	0	0		B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant;nc|ENSG00000170340|Q9NY97-2|B3GNT2;ENSG00000170340|ENST00000301998|B3GNT2	B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	B3GNT2|p.F353Lfs*19|1|0.04|ENSG00000170340|chr2:62223277-62223278|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2848388552666	2	595.285463	1188.55637	0.64827	0.00038591	-0.45307	-0.00026971	0.1952	0.0001162	595.2851228712311	57.152	0.42374	59.12	58.903	59.327	1.9684					58	26	3	0	0	0	0.00020031	4	23992	23913;23953;23992;24031		142.08	83.401	1	28740000			24031	99	11932	11986	27752;27753;27754;27755	27754					-0.030363465333948625
NYRNLVAETL	10	Unmodified	_NYRNLVAETL_					0	0	0			REV__KIF26B-SMYD3|5|fusion	REV__KIF26B-SMYD3|5|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	596.7769042849541	2	596.81967	1191.62479	1.3049	0.00077878	2.9288	0.0017479	4.2336	0.0025267	596.821172790312	80.038	0.2804	81.754	81.537	81.817	1.7167					10	8	2	0	0	0	0.12425	1	33572	33572		13.906	0.86358	1	289020	+		24032	10668	11933	11987	27756	27756					0.03663898046443137
NYRWIRFL	8	Unmodified	_NYRWIRFL_					0	0	0			REV__ENSG00000143158|ENST00000271373|MPC2	REV__ENSG00000143158|ENST00000271373|MPC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3245117068291	2	584.324725	1166.6349	0.80135	0.00046825	-1.1561	-0.00067553	-0.35473	-0.00020728	584.3239644861308	56.697	0.29535	58.665	58.487	58.782	1.9684					19	9	3	0	0	0	0.82039	1	23743	23743		19.439	0.18201	1	1515900	+		24033	10196	11934	11988	27757	27757					0.05824550562329023
NYSDAIVWL	9	Unmodified	_NYSDAIVWL_					0	0	0		ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1080.540209949017	1	1080.53604	1079.52876	2.7811	0.0030051	-0.57126	-0.00061727	2.2098	0.0023878	1080.5350154911628	78.805	0.43679	80.072	79.879	80.316	1.2668					27	13	3	0	0	0	0.0058174	2	33069	33069;33120		118.89	82.768	1	3070000			24034	2615	11935	11989	27758;27759	27758					-0.007822497936786021
NYSDAIVWL	9	Unmodified	_NYSDAIVWL_					0	0	0		ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7725097537041	2	540.771657	1079.52876	2.8273	0.0015289	-1.0156	-0.0005492	1.8118	0.00097975	540.7709886071473	78.809	0.52911	80.076	79.694	80.224	1.2668					28	16	3	0	0	0	0.098163	1	33092	33092		49.933	24.534	1	1549100			24035	2615	11935	11989	27760	27760					-0.007822497936786021
NYSDAIVWL	9	Unmodified	_NYSDAIVWL_					0	0	0		ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7731201052666	2	540.771657	1079.52876	2.2093	0.0011947	-0.72664	-0.00039295	1.4826	0.00080177	540.7714453790305	78.414	0.40392	80.149	79.885	80.289	1.735					28	12	3	0	0	0	0.10993	2	32897	32830;32897		46.021	24.274	1	3194600			24036	2615	11935	11989	27761;27762	27762					-0.007822497936786021
NYSDAIVWL	9	Unmodified	_NYSDAIVWL_					0	0	0		ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	ENSG00000134440|ENST00000256854|NARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1080.539111316204	1	1080.53604	1079.52876	2.3855	0.0025776	0.45605	0.00049278	2.8415	0.0030704	1080.5356074810445	78.383	0.37283	80.118	79.885	80.258	1.735					25	11	3	0	0	0	0.0058174	2	32842	32842;32899		118.89	82.768	1	2810600			24037	2615	11935	11989	27763;27764	27763					-0.007822497936786021
NYSDVMSKLGF	11	Unmodified	_NYSDVMSKLGF_					0	0	0		nc|ENSG00000009413|O60673-2|REV3L;ENSG00000009413|ENST00000368802|REV3L	nc|ENSG00000009413|O60673-2|REV3L	nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	630.8006469607353	2	630.800088	1259.58562	1.9557	0.0012336	0.16211	0.00010226	2.1178	0.0013359	630.7995045974835	65.891	0.4245	67.289	67.004	67.428	1.3989					36	13	4	0	0	0	0.0054879	2	27662	27606;27662		111.31	51.235	1	3292800			24038	538	11936	11990	27765;27766	27766					-0.033785702994691746
NYSDVMSKLGF	11	Unmodified	_NYSDVMSKLGF_					0	0	0		nc|ENSG00000009413|O60673-2|REV3L;ENSG00000009413|ENST00000368802|REV3L	nc|ENSG00000009413|O60673-2|REV3L	nc|ENSG00000009413|O60673-2|REV3L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	630.8007079958916	2	630.800088	1259.58562	1.2991	0.00081947	0.92087	0.00058088	2.22	0.0014003	630.7999493945485	65.42	0.33949	67.328	67.157	67.496	1.9085					24	10	3	0	0	0	0.026368	2	27426	27426;27476		92.201	40.571	1	3470900			24039	538	11936	11990	27767;27768	27767					-0.033785702994691746
NYSGAAEYLYF	11	Unmodified	_NYSGAAEYLYF_					0	0	0		ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.2904540896416	2	649.290411	1296.56627	1.7295	0.001123	0.94242	0.00061191	2.672	0.0017349	649.2908047142727	68.895	0.41536	70.261	70.028	70.443	1.3657					34	12	4	0	0	0	0.026828	2	28895	28895;28947		89.401	63.133	1	2515100			24040	1461	11937	11991	27769;27770	27769					-0.07015203318724161
NYSGAAEYLYF	11	Unmodified	_NYSGAAEYLYF_					0	0	0		ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.2929565310478	2	649.290411	1296.56627	2.0695	0.0013437	0.14194	9.2162E-05	2.2115	0.0014359	649.2902285080171	68.316	0.38425	70.186	70.01	70.395	1.87					28	11	3	0	0	0	0.019302	2	28695	28647;28695		99.755	68.487	1	3177400			24041	1461	11937	11991	27771;27772	27772					-0.07015203318724161
NYSNIRFQF	9	Unmodified	_NYSNIRFQF_					0	0	0		nc|ENSG00000139505|Q9Y217-2|MTMR6;ENSG00000139505|ENST00000381801|MTMR6	nc|ENSG00000139505|Q9Y217-2|MTMR6	nc|ENSG00000139505|Q9Y217-2|MTMR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.7942382693291	2	594.793455	1187.57236	1.3301	0.00079116	-0.92609	-0.00055083	0.40405	0.00024033	594.7926131821312	50.874	0.33028	52.268	52.047	52.377	1.3938					25	10	3	0	0	0	0.00020031	2	21259	21259;21305		142.08	92.147	1	3581700			24042	2877	11938	11992	27773;27774	27773					-0.01392640296535319
NYSNIRFQF	9	Unmodified	_NYSNIRFQF_					0	0	0		nc|ENSG00000139505|Q9Y217-2|MTMR6;ENSG00000139505|ENST00000381801|MTMR6	nc|ENSG00000139505|Q9Y217-2|MTMR6	nc|ENSG00000139505|Q9Y217-2|MTMR6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.7932617068291	2	594.793455	1187.57236	1.499	0.00089159	-0.47439	-0.00028217	1.0246	0.00060942	594.7931076412333	50.284	0.32742	52.261	52.039	52.367	1.9772					23	10	4	0	0	0	0.026734	2	21069	21023;21069		92.653	42.72	1	4435300			24043	2877	11938	11992	27775;27776	27776					-0.01392640296535319
NYSPVSRIGLF	11	Unmodified	_NYSPVSRIGLF_					0	0	0		ENSG00000140740|ENST00000268379|UQCRC2	ENSG00000140740|ENST00000268379|UQCRC2	ENSG00000140740|ENST00000268379|UQCRC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8386108279228	2	626.837862	1251.66117	0.15595	9.7757E-05	0.27427	0.00017192	0.43022	0.00026968	626.8379347891207	56.98	0.17341	58.948	58.845	59.018	1.9684					8	5	2	0	0	0	0.1544	1	23912	23912		46.022	16.941	1	1908100			24044	2932	11939	11993	27777	27777					0.04540774943143333
NYSPYVNYF	9	Unmodified	_NYSPYVNYF_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.7594482302666	2	583.761289	1165.50803	1.653	0.00096497	-3.9129	-0.0022842	-2.2599	-0.0013192	583.7585617011807	58.818	0.28102	60.238	60.1	60.381	1.4192					19	8	3	0	0	0	0.22154	1	24646	24646		30.637	12.502	1	1707700			24045	3439	11940	11994	27778	27778					-0.0681084017332978
NYSPYVNYF	9	Unmodified	_NYSPYVNYF_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.7602416872978	2	583.761289	1165.50803	1.3754	0.00080291	-0.83974	-0.00049021	0.53567	0.0003127	583.7606168514725	58.325	0.28016	60.294	60.148	60.429	1.969					17	8	3	0	0	0	0.22154	1	24450	24450		30.637	10.183	1	2052900			24046	3439	11940	11994	27779	27779					-0.0681084017332978
NYTCCWTYCG	10	Unmodified	_NYTCCWTYCG_					0	0	0		ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2076293826103	2	607.209195	1212.40384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.865	1	32.68	32.18	33.18	1.8151								0	0	0	0.66264	1	12938	12938		0	0	1				24047	4537	11941	11995	27780	27780					-0.19386949588351854
NYTCCWTYCG	10	Unmodified	_NYTCCWTYCG_					0	0	0		ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2087890505791	2	607.209195	1212.40384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.989	1	32.804	32.304	33.304	1.8151								0	0	0	0.66264	1	12990	12990		0	0	1				24048	4537	11941	11995	27781	27781					-0.19386949588351854
NYTCCWTYCG	10	Unmodified	_NYTCCWTYCG_					0	0	0		ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	ENSG00000180083|ENST00000324384|WFDC11	MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2103149294853	2	607.209195	1212.40384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.087	1	64.044	63.544	64.544	1.9571								0	0	0	0.66264	1	26048	26048		0	0	1				24049	4537	11941	11995	27782	27782					-0.19386949588351854
NYTDIKDYL	9	Unmodified	_NYTDIKDYL_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.7807494997978	2	572.779679	1143.5448	2.165	0.0012401	0.31902	0.00018273	2.484	0.0014228	572.7796571018342	50.531	0.49335	51.925	51.615	52.109	1.3938					37	15	3	0	0	0	0.014947	2	21147	21100;21147		103.42	53.486	1	5459800			24050	1799	11942	11996	27783;27784	27784					-0.021225883474244256
NYTDIKDYL	9	Unmodified	_NYTDIKDYL_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7811157107353	2	572.779679	1143.5448	1.6847	0.00096494	1.0202	0.00058435	2.7049	0.0015493	572.7800734562538	49.98	0.37035	51.957	51.758	52.128	1.9772					32	11	4	0	0	0	0.0070725	3	20950	20907;20950;20997		114.2	64.269	1	5730900			24051	1799	11942	11996	27785;27786;27787	27786					-0.021225883474244256
NYTDNELEK	9	Unmodified	_NYTDNELEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.2571288943291	2	563.256568	1124.49858	0.077038	4.3392E-05	-1.4863	-0.00083718	-1.4093	-0.00079379	563.2555794632298	12.393	0.43329	12.393	12.188	12.622	0					16	13	2	0	0	0	0.10473	1	5138	5138		47.749	23.728	1	1108300			24052	3217	11943	11997	27788	27788					-0.05868653249513045
NYTDNELEK	9	Unmodified	_NYTDNELEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.2568237185478	2	563.256568	1124.49858	0.20757	0.00011691	0.32024	0.00018037	0.5278	0.00029729	563.2570303407799	15.26	0.59208	15.26	14.905	15.497	0					43	18	4	0	0	0	0.023685	3	6353	6303;6353;6406		96.367	55.733	1	9592500			24053	3217	11943	11997	27789;27790;27791	27790					-0.05868653249513045
NYTDNELEK	9	Unmodified	_NYTDNELEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.2568237185478	2	563.256568	1124.49858	0.23955	0.00013493	0.025946	1.4614E-05	0.26549	0.00014954	563.2567255869285	15.253	0.37587	15.383	15.211	15.587	0.13022					23	11	3	0	0	0	0.081597	2	6328	6328;6378		55.503	30.103	1	2196600			24054	3217	11943	11997	27792;27793	27792					-0.05868653249513045
NYTDNELEK	9	Unmodified	_NYTDNELEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2582885622978	2	563.256568	1124.49858	0.16911	9.525E-05	-0.40915	-0.00023046	-0.24005	-0.00013521	563.2569731770104	14.784	0.27368	15.553	15.432	15.705	0.76937					14	8	2	0	0	0	0.44062	1	6133	6133		18.373	11.084	1	914800			24055	3217	11943	11997	27794	27794					-0.05868653249513045
NYTDNELEK	9	Unmodified	_NYTDNELEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2543823122978	2	563.256568	1124.49858	0.20514	0.00011554	-0.035793	-2.016E-05	0.16934	9.5383E-05	563.2560594745993	14.705	0.34691	15.602	15.426	15.773	0.89664					16	11	3	0	0	0	0.22861	1	6098	6098		29.841	13.993	1	841840			24056	3217	11943	11997	27795	27795					-0.05868653249513045
NYTDQWERW	9	Unmodified	_NYTDQWERW_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.2837402224541	2	649.283451	1296.55235	1.2984	0.00084301	-0.60771	-0.00039457	0.69066	0.00044844	649.2833475389315	45.944	0.30624	47.915	47.727	48.033	1.9703					12	9	2	0	0	0	0.44062	1	19251	19251		18.373	5.5005	1	444950			24057	3940	11944	11998	27796	27796					-0.08406436027144082
NYTELVPVPLS	11	Unmodified	_NYTELVPVPLS_					0	0	0			REV__nc|ENSG00000158195|Q9Y6W5-2|WASF2	REV__nc|ENSG00000158195|Q9Y6W5-2|WASF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.3353759646416	2	616.332079	1230.6496	5.5031	0.0033917	-3.9544	-0.0024372	1.5486	0.00095447	616.3295838588435	88.425	0.28934	89.482	89.369	89.659	1.0562					14	8	2	0	0	0	0.77451	1	37292	37292		16.149	1.3108	1	965590	+		24058	10550	11945	11999	27797	27797					0.04350533129172618
NYTELVPVPLS	11	Unmodified	_NYTELVPVPLS_					0	0	0			REV__nc|ENSG00000158195|Q9Y6W5-2|WASF2	REV__nc|ENSG00000158195|Q9Y6W5-2|WASF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	616.332079	1230.6496	5.5031	0.0033917	-3.9544	-0.0024372	1.5486	0.00095447	616.3295838588435	88.425	0.28934	89.482	89.369	89.659	1.0562	0.01983	-0.00061334	NaN	16.149	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	965590	+		24059	10550	11945	11999							0.04350533129172618
NYTEWKFSE	9	Unmodified	_NYTEWKFSE_					0	0	0		nc|ENSG00000092200|Q96KN7-4|RPGRIP1;nc|ENSG00000092200|Q96KN7-3|RPGRIP1;nc|ENSG00000092200|Q96KN7-2|RPGRIP1;nc|ENSG00000092200|Q96KN7-5|RPGRIP1;ENSG00000092200|ENST00000400017|RPGRIP1	nc|ENSG00000092200|Q96KN7-4|RPGRIP1	nc|ENSG00000092200|Q96KN7-4|RPGRIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.2696411013603	2	602.269478	1202.5244	2.7515	0.0016572	-1.789	-0.0010775	0.96253	0.0005797	602.2689056806063	78.721	0.37609	79.988	79.817	80.193	1.2668					23	11	3	0	0	0	0.12216	1	33043	33043		41.956	7.5538	1	1488200			24060	1162	11946	12000	27798	27798					-0.06875759007198212
NYTEWKFSE	9	Unmodified	_NYTEWKFSE_					0	0	0		nc|ENSG00000092200|Q96KN7-4|RPGRIP1;nc|ENSG00000092200|Q96KN7-3|RPGRIP1;nc|ENSG00000092200|Q96KN7-2|RPGRIP1;nc|ENSG00000092200|Q96KN7-5|RPGRIP1;ENSG00000092200|ENST00000400017|RPGRIP1	nc|ENSG00000092200|Q96KN7-4|RPGRIP1	nc|ENSG00000092200|Q96KN7-4|RPGRIP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	602.269478	1202.5244	2.0925	0.0012603	-2.5647	-0.0015447	-0.47221	-0.0002844	602.268553972696	78.239	0.3723	79.974	79.824	80.196	1.735	-0.0071495	-0.00038397	NaN	41.956	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211700			24061	1162	11946	12000							-0.06875759007198212
NYTEWLQDL	9	Unmodified	_NYTEWLQDL_					0	0	0		chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1	chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.2795287966728	2	591.277303	1180.54005	2.7779	0.0016425	0.62161	0.00036754	3.3995	0.0020101	591.2775473876011	78.72	0.43736	79.987	79.755	80.193	1.2668					39	13	4	0	0	0	0.00013275	3	33048	33000;33048;33086		145.13	65.533	1	9142100			24062	244	11947	12001	27799;27800;27801	27800					-0.04299472490174594
NYTEWLQDL	9	Unmodified	_NYTEWLQDL_					0	0	0		chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1;nc|ENSG00000125844|Q9P2E9-3|RRBP1;ENSG00000125844|ENST00000377813|RRBP1	chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1	chr20:17621773-17624576|117|10.65|0.34|4.95|-|0|RRBP1,RRBP1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.2788574099541	2	591.277303	1180.54005	2.0743	0.0012265	1.0207	0.00060351	3.095	0.00183	591.277849527691	78.258	0.49692	79.993	79.761	80.258	1.735					44	15	4	0	0	0	0.0022704	2	32791	32791;32839		129.77	54.011	1	9742700			24063	244	11947	12001	27802;27803	27802					-0.04299472490174594
NYTLVSHLI	9	Unmodified	_NYTLVSHLI_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000548630.1_1_12:57906018-57906171:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2962524294853	2	530.295299	1058.57605	1.7136	0.00090869	0.74204	0.0003935	2.4556	0.0013022	530.2955708996914	54.544	0.90539	55.949	55.676	56.581	1.4048					92	29	5	0	0	0	0.0082953	5	22828	22746;22789;22828;22867;22906		109.63	67.535	1	114750000			24064	3940	11948	12002	27804;27805;27806;27807;27808	27806					0.049100294773325004
NYTLVSHLI	9	Unmodified	_NYTLVSHLI_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;ENST00000537638.6_1_12:57905855-57911076:+|nuORF;ENST00000548630.1_1_12:57906018-57906171:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2959472537041	2	530.295299	1058.57605	1.7762	0.00094192	-0.14878	-7.89E-05	1.6274	0.00086302	530.2951148148036	54.018	0.80643	55.986	55.688	56.495	1.9684					87	25	5	0	0	0	0.006164	5	22594	22546;22594;22631;22670;22711		117.6	75.504	1	98741000			24065	3940	11948	12002	27809;27810;27811;27812;27813	27810					0.049100294773325004
NYVIAFVQF	9	Unmodified	_NYVIAFVQF_					0	0	0			REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.7953979372978	2	550.792392	1099.57023	2.6362	0.001452	1.3967	0.00076931	4.0329	0.0022213	550.7936249570531	82.908	0.30309	84.121	83.983	84.286	1.2125					17	9	2	0	0	0	0.46905	1	34805	34805		16.942	4.4107	1	3136000	+		24066	14302	11949	12003	27814	27814					0.024429309656625264
NYVIAFVQF	9	Unmodified	_NYVIAFVQF_					0	0	0			REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	550.792392	1099.57023	2.6362	0.001452	1.3967	0.00076931	4.0329	0.0022213	550.7936249570531	82.908	0.30309	84.121	83.983	84.286	1.2125	-0.0045304	-0.0012564	NaN	16.942	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3136000	+		24067	14302	11949	12003							0.024429309656625264
NYVIAFVQF	9	Unmodified	_NYVIAFVQF_					0	0	0			REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	REV__L1PA2_dup1619|chr5:71851116-71854174:+|2.376726425342643|0.0208621851436049|6.83|429.0|128|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	550.792392	1099.57023	3.0133	0.0016597	3.2309	0.0017796	6.2443	0.0034393	550.7943969883893	82.46	0.31308	84.13	83.923	84.236	1.67	0.0045304	0.00076414	NaN	16.942	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3101700	+		24068	14302	11949	12003							0.024429309656625264
NYVKDLSRL	9	Unmodified	_NYVKDLSRL_					0	0	0		nc|ENSG00000144677|O15194-2|CTDSPL;ENSG00000144677|ENST00000273179|CTDSPL;ENST00000464255.1_1_2:219265892-219269145:+|nuORF;nc|ENSG00000144579|Q9GZU7-3|CTDSP1;nc|ENSG00000144579|Q9GZU7-2|CTDSP1;ENSG00000144579|ENST00000273062|CTDSP1;ENST00000497677.5_1_2:219264813-219268311:+|nuORF;OXSR1-CTDSPL|1|fusion;OXSR1-CTDSPL|2|fusion	nc|ENSG00000144677|O15194-2|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3122436404228	2	554.31148	1106.60841	0.69312	0.0003842	1.7691	0.00098066	2.4623	0.0013649	554.3119011679119	30.419	0.27888	31.702	31.564	31.843	1.2825					12	8	2	0	0	0	0.50272	1	12775	12775		15.248	3.7538	1	635900			24069	3089	11950	12004	27815	27815					0.05936816880330298
NYVKDLSRL	9	Unmodified	_NYVKDLSRL_					0	0	0		nc|ENSG00000144677|O15194-2|CTDSPL;ENSG00000144677|ENST00000273179|CTDSPL;ENST00000464255.1_1_2:219265892-219269145:+|nuORF;nc|ENSG00000144579|Q9GZU7-3|CTDSP1;nc|ENSG00000144579|Q9GZU7-2|CTDSP1;ENSG00000144579|ENST00000273062|CTDSP1;ENST00000497677.5_1_2:219264813-219268311:+|nuORF;OXSR1-CTDSPL|1|fusion;OXSR1-CTDSPL|2|fusion	nc|ENSG00000144677|O15194-2|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	554.31148	1106.60841	0.73075	0.00040506	2.6084	0.0014458	3.3391	0.0018509	554.312910315825	29.908	0.21561	31.723	31.615	31.83	1.8151	0.010607	0.00029078	NaN	15.248	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	513000			24070	3089	11950	12004							0.05936816880330298
NYVLVPTMF	9	Oxidation (M)	_NYVLVPTM(Oxidation (M))F_		NYVLVPTM(1)F		NYVLVPTM(74)F	0	0	1		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2776977419853	2	550.27826	1098.54197	1.9168	0.0010548	-4.1634	-0.0022911	-2.2466	-0.0012363	550.2761226883576	69.406	0.40836	70.772	70.53	70.939	1.3657					32	13	3	0	0	0	0.042029	1	29113	29113		74.423	43.786	1	5203100			24071	959	11951	12005	27816	27816		17			-0.0033613500593219214
NYVLVPTMF	9	Oxidation (M)	_NYVLVPTM(Oxidation (M))F_		NYVLVPTM(1)F		NYVLVPTM(64)F	0	0	1		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.2764160037041	2	550.27826	1098.54197	1.2757	0.00070196	-3.897	-0.0021444	-2.6213	-0.0014425	550.2759678878343	68.839	0.48003	70.692	70.497	70.977	1.853					32	15	3	0	0	0	0.059546	2	28914	28865;28914		64.236	42.49	1	5322600			24072	959	11951	12005	27817;27818	27818		17			-0.0033613500593219214
NYVLVPTMF	9	Unmodified	_NYVLVPTMF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2822143435478	2	542.280803	1082.54705	2.8377	0.0015388	2.3219	0.0012591	5.1596	0.002798	542.2807684000863	82.908	0.492	84.121	83.889	84.381	1.2125					29	15	2	0	0	0	0.059546	3	34791	34747;34791;34847		64.236	30.165	1	19363000			24073	959	11951	12006	27819;27820;27821	27820					0.009081688566993762
NYVLVPTMF	9	Unmodified	_NYVLVPTMF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1083.558032214642	1	1083.55433	1082.54705	2.7675	0.0029987	-3.7184	-0.0040291	-0.95097	-0.0010304	1083.5525732047035	82.856	0.58684	84.068	83.826	84.413	1.2125					52	18	4	0	0	0	0.049839	2	34778	34778;34827		68.081	33.679	1	8034800			24074	959	11951	12006	27822;27823	27822					0.009081688566993762
NYVLVPTMF	9	Unmodified	_NYVLVPTMF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2834960818291	2	542.280803	1082.54705	3.0741	0.001667	3.0357	0.0016462	6.1098	0.0033132	542.2815685953959	82.482	0.52493	84.152	83.861	84.386	1.67					42	16	4	0	0	0	0.029093	3	34592	34543;34592;34651		88.904	58.679	1	21412000			24075	959	11951	12006	27824;27825;27826	27825					0.009081688566993762
NYVLVPTMF	9	Unmodified	_NYVLVPTMF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1083.553881824017	1	1083.55433	1082.54705	3.3525	0.0036326	-2.9383	-0.0031838	0.41423	0.00044884	1083.5530348404511	82.423	0.34378	84.093	83.892	84.236	1.67					25	10	4	0	0	0	0.045797	1	34545	34545		71.134	36.732	1	8549000			24076	959	11951	12006	27827	27827					0.009081688566993762
NYVPVNHFW	9	Unmodified	_NYVPVNHFW_					0	0	0		ENST00000565298.5_1_16:1576517-1634259:-|nuORF;ENST00000439987.6_1_16:1604037-1657279:-|nuORF;ENSG00000187535|ENST00000426508|IFT140	ENST00000565298.5_1_16:1576517-1634259:-|nuORF	ENST00000565298.5_1_16:1576517-1634259:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2857543826103	2	588.285266	1174.55598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.329	1	52.723	52.223	53.223	1.3938								0	0	0	0.317	1	21492	21492		16.942	8.349	1				24077	4826	11952	12007	27828	27828					-0.02431721462630776
NYVSLFEVL	9	Unmodified	_NYVSLFEVL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2899658083916	2	542.289682	1082.56481	4.1564	0.002254	1.8629	0.0010102	6.0193	0.0032642	542.792363154679	92.273	0.61575	93.209	92.923	93.539	0.93624					37	18	3	0	0	0	0.5697	1	38889	38889		12.532	3.9383	1	1095200			24078	5388	11953	12008	27829	27829					0.026832073831883463
NYVSLFEVL	9	Unmodified	_NYVSLFEVL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2914306521416	2	542.289682	1082.56481	3.3008	0.00179	1.3238	0.00071791	4.6246	0.0025079	542.2902688413185	91.856	0.384	93.183	92.989	93.373	1.3269					19	11	2	0	0	0	0.5697	1	38707	38707		12.532	0.89125	1	674700			24079	5388	11953	12008	27830	27830					0.026832073831883463
NYWHETCF	8	Unmodified	_NYWHETCF_					0	0	0		FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant;ENSG00000112214|ENST00000450218|FHL5	FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	FHL5|p.D206Gfs*27|1|0.05|ENSG00000112214|chr6:96610683-96610684|-/GACTGAAAAAACACTTAAGAAATGGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2181884646416	2	550.218734	1098.42292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.743	1	77.044	76.544	77.544	1.3005								0	0	0	1.0178	1	31790	31790		2.8892	0.58649	1				24080	1773	11954	12009	27831	27831					-0.12235908910770377
NYYAFFKLL	9	Unmodified	_NYYAFFKLL_					0	0	0		ENST00000476968.5_1_1:32560475-32568271:+|nuORF;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.8171874880791	2	589.815867	1177.61718	3.742	0.0022071	0.15978	9.4242E-05	3.9018	0.0023014	589.8157193301344	81.817	0.27817	83.03	82.883	83.162	1.2125					18	8	3	0	0	0	0.066815	1	34343	34343		61.357	35.958	1	887360			24081	2141	11955	12010	27832	27832					0.0354779051681362
NYYAFFKLL	9	Unmodified	_NYYAFFKLL_					0	0	0		ENST00000476968.5_1_1:32560475-32568271:+|nuORF;nc|ENSG00000121775|Q9GZU3-4|TMEM39B;ENST00000468135.5_1_1:32542241-32568271:+|nuORF;ENSG00000121775|ENST00000336294|TMEM39B	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	ENST00000476968.5_1_1:32560475-32568271:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8170043826103	2	589.815867	1177.61718	3.3535	0.001978	0.28553	0.00016841	3.6391	0.0021464	589.8154998488009	81.315	0.24474	83.011	82.892	83.136	1.6959					13	7	2	0	0	0	0.066815	1	34117	34117		61.357	42.1	1	1057100			24082	2141	11955	12010	27833	27833					0.0354779051681362
NYYEQWGK	8	Unmodified	_NYYEQWGK_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2472411990166	2	544.245806	1086.47706	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.193	1	25.435	24.935	25.935	1.241								0	0	0	1.0178	1	10117	10117		13.508	1.8676	1				24083	2162	11956	12011	27834	27834					-0.06271993487553118
NYYKVNWTF	9	Unmodified	_NYYKVNWTF_					0	0	0		ENST00000518345.1_1_8:109254078-109254135:-|nuORF	ENST00000518345.1_1_8:109254078-109254135:-|nuORF	ENST00000518345.1_1_8:109254078-109254135:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.7997314333916	2	617.798206	1233.58186	0.77335	0.00047777	0.82315	0.00050854	1.5965	0.00098632	617.7986469510923	55.546	0.38793	56.956	56.732	57.119	1.4099					23	14	2	0	0	0	0.026836	2	23288	23238;23288		92.491	67.092	1	5299800			24084	7060	11957	12012	27835;27836	27836					-0.02558872011013591
NYYKVNWTF	9	Unmodified	_NYYKVNWTF_					0	0	0		ENST00000518345.1_1_8:109254078-109254135:-|nuORF	ENST00000518345.1_1_8:109254078-109254135:-|nuORF	ENST00000518345.1_1_8:109254078-109254135:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.7989379763603	2	617.798206	1233.58186	0.069468	4.2917E-05	1.4552	0.00089901	1.5246	0.00094192	617.798736151191	55.078	0.27879	57.047	56.871	57.15	1.9684					24	9	3	0	0	0	0.007852	2	23119	23071;23119		111.29	83.658	1	5643200			24085	7060	11957	12012	27837;27838	27838					-0.02558872011013591
PAAARGNN	8	Unmodified	_PAAARGNN_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	770.3925048708916	1	770.390376	769.3831	2.5706	0.0019804	2.9499	0.0022726	5.5205	0.0042529	770.3917632682267	102.07	0.11264	102.24	102.2	102.31	0.17032					6	3	2	0	0	0	0.88958	1	42956	42956		2.8892	0.31174	1	7318400	+		24086	8180	11958	12013	27839	27839					-0.01081667799189745
PAAARGNN	8	Unmodified	_PAAARGNN_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	770.390376	769.3831	2.5706	0.0019804	2.9499	0.0022726	5.5205	0.0042529	770.3917632682267	102.07	0.11264	102.24	102.2	102.31	0.17032	0.022004	-0.00080648	NaN	2.8892	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7318400	+		24087	8180	11958	12013							-0.01081667799189745
PAAARGNN	8	Unmodified	_PAAARGNN_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	770.390376	769.3831	2.7991	0.0021564	6.825	0.0052579	9.6241	0.0074143	770.3956154632328	102	0.11779	102.19	102.14	102.26	0.19076	-0.022004	0.0021789	NaN	2.8892	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3303200	+		24088	8180	11958	12013							-0.01081667799189745
PAAFMESG	8	Unmodified	_PAAFMESG_					0	0	0			REV__ENSG00000176170|ENST00000592299|SPHK1	REV__ENSG00000176170|ENST00000592299|SPHK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1788513064384	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.747	1	93.892	93.392	94.392	0.14493								0	0	0	1.0178	1	39241	39241		0.79363	0	1		+		24089	11172	11959	12014	27840	27840					-0.06929770233818999
PAAGIYLKL	9	Unmodified	_PAAGIYLKL_					0	0	0			REV__tr|A0A553SUQ9|A0A553SUQ9_NIACISensorhistidinekinaseKdpDOS=NialliacirculansOX=1397GN=CEQ21_05145PE=4SV=1	REV__tr|A0A553SUQ9|A0A553SUQ9_NIACISensorhistidinekinaseKdpDOS=NialliacirculansOX=1397GN=CEQ21_05145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2956115603447	2	473.292028	944.569503	3.2548	0.0015405	3.1647	0.0014978	6.4195	0.0030383	473.29380581161536	61.164	0.4922	62.583	62.314	62.806	1.4196					45	15	4	0	0	0	0.41943	1	25712	25712		19.439	2.3524	1	7804800	+		24090	15304	11960	12015	27841	27841					0.09500136316592034
PAAGSKVL	8	Unmodified	_PAAGSKVL_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	372.1864501833916	2	371.726521	741.438489	0.3352	0.0001246	3.5488	0.0013192	3.884	0.0014438	371.7280469499247	23.405	0.58288	24.62	24.38	24.963	1.2145					42	18	3	0	0	0	2.3239	1	9834	9834		0	0	1	2882300			24091	4312	11961	12016	27842	27842					0.05742745668578664
PAAGSKVL	8	Unmodified	_PAAGSKVL_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	371.726521	741.438489	-1.3117	-0.00048759	6.1997	0.0023046	4.888	0.001817	371.72871327207787	24.555	0.24371	24.555	24.429	24.673	0	-0.11049	0.0016064	NaN	0	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	415630			24092	4312	11961	12016							0.05742745668578664
PAAGSKVL	8	Unmodified	_PAAGSKVL_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	371.726521	741.438489	0.67461	0.00025077	3.6896	0.0013715	4.3642	0.0016223	371.7279658540827	24.603	0.79076	24.845	24.381	25.171	0.24251	0.18	-0.00025974	NaN	0	49	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3737200			24093	4312	11961	12016							0.05742745668578664
PAAGSKVL	8	Unmodified	_PAAGSKVL_					0	0	0		ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	ENSG00000174106|ENST00000308330|LEMD3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	371.726521	741.438489	0.22072	8.2048E-05	3.7247	0.0013846	3.9454	0.0014666	371.7280617988599	22.99	0.49602	24.642	24.404	24.9	1.6511	-0.023752	-0.00023366	NaN	0	45	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3364200			24094	4312	11961	12016							0.05742745668578664
PAAHHLGG	8	Unmodified	_PAAHHLGG_					0	0	0			REV__chr12:124344874-124346564|159|21.47|0.95|4.5|-|2|None,NCOR2|1	REV__chr12:124344874-124346564|159|21.47|0.95|4.5|-|2|None,NCOR2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	759.3919555544853	1	759.389648	758.382371	1.3415	0.0010188	0.92772	0.0007045	2.2693	0.0017233	759.3907985042872	108.5	0.25655	108.5	108.36	108.62	0					29	11	3	0	0	0	0.89176	1	46806	46806		0.79363	0	1	134160000	+		24095	8245	11962	12017	27843	27843					-0.0064846244822547305
PAAHHVAG	8	Unmodified	_PAAHHVAG_					0	0	0		ENST00000609682.1_1_3:101395365-101395752:+|nuORF	ENST00000609682.1_1_3:101395365-101395752:+|nuORF	ENST00000609682.1_1_3:101395365-101395752:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	759.3927490115166	1	759.389648	758.382371	2.7312	0.002074	-0.70737	-0.00053717	2.0238	0.0015369	759.3895551023671	108.5	0.23705	108.55	108.4	108.64	0.050644					38	13	3	0	0	0	0.89176	2	46589	46589;46642		0.79363	0	1	148290000			24096	7575	11963	12018	27844;27845	27844					-0.006484624482368417
PAAPAKKT	8	Unmodified	_PAAPAKKT_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	392.3182250857353	2	392.239796	782.465038	3.0576	0.0011993	0.65596	0.0002573	3.7135	0.0014566	392.24047387773413	103.9	0.077362	104.08	104.03	104.11	0.1731					10	3	4	0	0	0	2.3239	1	43831	43831		0.6015	0	1	15228000			24097	576	11964	12019	27846	27846					0.06510434559902478
PAAPAKKT	8	Unmodified	_PAAPAKKT_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	392.239796	782.465038	-0.52809	-0.00020714	5.9927	0.0023506	5.4646	0.0021434	392.2424163003766	103.98	0.076126	103.98	103.93	104.01	0	-0.057029	0.003301	NaN	0.6015	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25048000			24098	576	11964	12019							0.06510434559902478
PAAPAKKT	8	Unmodified	_PAAPAKKT_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	392.239796	782.465038	2.7718	0.0010872	2.1158	0.00082991	4.8876	0.0019171	392.2407727196535	103.96	0.076324	104.02	103.97	104.05	0.059502	-0.018344	0.00025971	NaN	0.6015	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20303000			24099	576	11964	12019							0.06510434559902478
PAAPAKKT	8	Unmodified	_PAAPAKKT_					0	0	0		ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	ENSG00000011677|ENST00000370314|GABRA3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	392.239796	782.465038	2.5667	0.0010068	0.91444	0.00035868	3.4812	0.0013654	392.24036693793926	103.92	0.075546	104.08	104.05	104.13	0.16055	0.039722	-0.00068275	NaN	0.6015	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15562000			24100	576	11964	12019							0.06510434559902478
PAAPESVP	8	Unmodified	_PAAPESVP_					0	0	0			REV__ENST00000549913.6_1_12:113306162-113306792:+|nuORF	REV__ENST00000549913.6_1_12:113306162-113306792:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	767.3963500857353	1	767.393396	766.386119	2.9211	0.0022417	-0.70824	-0.0005435	2.2129	0.0016982	767.3927380169697	82.508	0.19295	83.721	83.57	83.763	1.2125					8	5	2	0	0	0	0.87655	1	34641	34641		11.114	0	1	546310	+		24101	8882	11965	12020	27847	27847					-0.006418374650365877
PAAVQLRYL	9	Unmodified	_PAAVQLRYL_					0	0	0		ENSG00000116218|ENST00000367615|NPHS2;nc|ENSG00000116218|Q9NP85-2|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2064086794853	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.919	1	14.747	14.247	15.247	0.82789								0	0	0	0.42693	1	5771	5771		1.1933	0	1				24102	1961	11966	12021	27848	27848					0.08350039576839663
PADISILLV	9	Unmodified	_PADISILLV_					0	0	0		tr|A0A553SHM0|A0A553SHM0_NIACItRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=NialliacirculansOX=1397GN=mnmGPE=3SV=1	tr|A0A553SHM0|A0A553SHM0_NIACItRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=NialliacirculansOX=1397GN=mnmGPE=3SV=1	tr|A0A553SHM0|A0A553SHM0_NIACItRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=NialliacirculansOX=1397GN=mnmGPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7126647830009	3	314.195304	939.564084	0.14819	4.656E-05	3.9381	0.0012373	4.0863	0.0012839	314.19649429920133	24.53	0.39109	25.771	25.609	26	1.241					23	12	3	0	0	0	0.11891	1	10320	10320		1.1933	0	1	1327300			24103	16160	11967	12022	27849	27849					0.09188412734158646
PADPPRVAQEL	11	Unmodified	_PADPPRVAQEL_					0	0	0			REV__ENSG00000161992|ENST00000409413|PRR35	REV__ENSG00000161992|ENST00000409413|PRR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8213378787041	2	596.81967	1191.62479	3.7298	0.002226	-2.2182	-0.0013238	1.5116	0.00090216	596.8182782670359	82.035	0.34843	83.705	83.45	83.799	1.67					15	10	2	0	0	0	0.84637	1	34430	34430		13.042	0.80181	1	858230	+		24104	10630	11968	12023	27850	27850					0.036638980464203996
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5450927615166	1	972.543431	971.536154	2.0984	0.0020407	-1.1239	-0.001093	0.97448	0.00094772	972.542441648093	82.385	0.39973	82.385	82.185	82.585	0					29	12	3	0	0	0	0.1735	1	34337	34337		36.044	3.7387	1	4071400			24105	16590	11969	12024	27851	27851					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7797119021416	2	486.775354	971.536154	2.3503	0.0011441	2.7153	0.0013218	5.0656	0.0024658	486.77610092493865	84.174	0.43369	84.174	83.966	84.399	0					22	13	2	0	0	0	0.24063	1	35058	35058		28.487	0	1	1720300			24106	16590	11969	12024	27852	27852					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.5452148318291	1	972.543431	971.536154	2.4115	0.0023453	-0.6581	-0.00064003	1.7534	0.0017052	972.5412634783279	83.681	0.27578	83.951	83.801	84.076	0.27029					15	8	2	0	0	0	0.19075	1	35005	35005		34.102	9.4286	1	1442100			24107	16590	11969	12024	27853	27853					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7769042849541	2	486.775354	971.536154	3.2092	0.0015621	1.8082	0.0008802	5.0174	0.0024423	486.7756512628203	82.662	1.0663	83.875	83.505	84.572	1.2125					66	33	4	0	0	0	0.1735	2	34690	34690;34784		36.044	0	1	9457900			24108	16590	11969	12024	27854;27855	27854					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.5460082888603	1	972.543431	971.536154	2.8702	0.0027914	2.9821	0.0029003	5.8524	0.0056917	972.5457486387277	82.692	0.58789	83.904	83.698	84.286	1.2125					27	18	2	0	0	0	0.09539	2	34724	34724;34763		50.855	3.7352	1	6809000			24109	16590	11969	12024	27856;27857	27856					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5457641482353	1	972.543431	971.536154	1.2972	0.0012616	-0.78426	-0.00076273	0.51291	0.00049883	972.5426423854386	80.38	0.53802	82.097	81.908	82.446	1.7167					41	17	3	0	0	0	0.24063	1	33832	33832		28.487	3.813	1	16048000			24110	16590	11969	12024	27858	27858					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5506469607353	1	972.543431	971.536154	3.1228	0.0030371	1.7359	0.0016883	4.8588	0.0047254	972.5449663611058	82.24	0.34683	83.91	83.734	84.081	1.67					28	10	4	0	0	0	0.24063	1	34451	34451		28.487	1.6032	1	7160100			24111	16590	11969	12024	27859	27859					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7776672244072	2	486.775354	971.536154	3.2887	0.0016009	1.3376	0.00065112	4.6264	0.002252	486.7754689271029	82.207	0.80869	83.877	83.671	84.48	1.67					57	25	4	0	0	0	0.1735	2	34469	34469;34519		36.044	0	1	7552700			24112	16590	11969	12024	27860;27861	27860					0.04924766482429277
PADSMLLLI	9	Unmodified	_PADSMLLLI_					0	0	0		tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	tr|A0A553SS20|A0A553SS20_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02095PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	486.775354	971.536154	3.1327	0.0015249	0.56475	0.00027491	3.6974	0.0017998	486.77511106309703	83.67	0.48772	83.941	83.739	84.227	0.27029	-0.02588	-0.00088652	NaN	36.044	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2162800			24113	16590	11969	12024							0.04924766482429277
PAEERRRQRRE	11	Unmodified	_PAEERRRQRRE_					0	0	0		ENST00000348354.6_1_21:18981451-18985174:-|nuORF	ENST00000348354.6_1_21:18981451-18985174:-|nuORF	ENST00000348354.6_1_21:18981451-18985174:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1483.302661120892	1	1482.79963	1481.79235	0.52504	0.00077853	1.4907	0.0022104	2.0157	0.0029889	1483.8027391065923	28.925	0.30235	30.208	30.131	30.433	1.2825					12	9	2	0	0	0	0.14606	1	12125	12125		1.3295	0.9789	1	1844500			24114	5968	11970	12025	27862	27862					0.07072978363726179
PAEHACVPVSL	11	Unmodified	_PAEHACVPVSL_					0	0	0		ENST00000503120.5_1_5:138724949-138725048:-|nuORF	ENST00000503120.5_1_5:138724949-138725048:-|nuORF	ENST00000503120.5_1_5:138724949-138725048:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2805053591728	2	561.784241	1121.55393	2.6454	0.0014861	-1.5967	-0.00089698	1.0487	0.00058914	561.783370537405	69.659	0.59804	71.512	71.136	71.734	1.853					38	15	4	0	0	0	0.83203	1	29164	29164		13.906	0.39817	1	10162000			24115	6985	11971	12026	27863	27863					-0.0019851826273225015
PAELENRIDR	10	Unmodified	_PAELENRIDR_					0	0	0		nc|ENSG00000147533|Q7Z5G4-3|GOLGA7;ENSG00000147533|ENST00000357743|GOLGA7	nc|ENSG00000147533|Q7Z5G4-3|GOLGA7	nc|ENSG00000147533|Q7Z5G4-3|GOLGA7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2115356326103	2	606.820201	1211.62585	1.7745	0.0010768	-2.1896	-0.0013287	-0.41514	-0.00025192	606.8189051086096	72.203	0.3812	72.528	72.355	72.737	0.32494					32	11	4	0	0	0	0.12525	1	30275	30275		3.5965	0.60125	1	2408700			24116	3184	11972	12027	27864	27864					0.02850112415330841
PAETVTGDPSV	11	Unmodified	_PAETVTGDPSV_					0	0	0			REV__nc|ENSG00000158467|Q96HN2-2|AHCYL2	REV__nc|ENSG00000158467|Q96HN2-2|AHCYL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.3011352419853	2	536.761486	1071.50842	2.3407	0.0012564	4.4771	0.0024031	6.8178	0.0036595	536.7642864029709	68.305	0.21359	69.683	69.553	69.766	1.3778					9	6	2	0	0	0	0.14606	1	28630	28630		9.3831	7.5389	1	499890	+		24117	10554	11973	12028	27865	27865					-0.024474652441313083
PAFKCPLL	8	Unmodified	_PAFKCPLL_					0	0	0		tr|A0A7D6VN86|A0A7D6VN86_9CLOTAldose1-epimerasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14340PE=4SV=1	tr|A0A7D6VN86|A0A7D6VN86_9CLOTAldose1-epimerasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14340PE=4SV=1	tr|A0A7D6VN86|A0A7D6VN86_9CLOTAldose1-epimerasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14340PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1206237673759	2	444.754224	887.493896	2.2512	0.0010012	3.7148	0.0016522	5.9659	0.0026534	444.75677272704894	46.353	0.34251	46.682	46.534	46.877	0.32899					17	11	2	0	0	0	2.3239	1	19495	19495		2.8892	2.1988	1	345860			24118	16726	11974	12029	27866	27866					0.045648358646758425
PAFLRRQKREP	11	Unmodified	_PAFLRRQKREP_					0	0	0		ENST00000535200.1_1_12:120648776-120650425:+|nuORF	ENST00000535200.1_1_12:120648776-120650425:+|nuORF	ENST00000535200.1_1_12:120648776-120650425:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	467.2547485232353	3	466.608993	1396.80515	1.7877	0.00083414	1.1825	0.00055177	2.9702	0.0013859	466.60911051773303	97.637	0.18319	97.637	97.507	97.69	0					9	5	3	0	0	0	0.14606	1	40792	40792		0.50596	0	1	3479200			24119	7194	11975	12030	27867	27867					0.12262041493909237
PAFQVKRV	8	Unmodified	_PAFQVKRV_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7116271853447	3	315.527388	943.560336	0.044635	1.4084E-05	1.0162	0.00032063	1.0608	0.00033471	315.5277653227133	25.583	0.52236	26.843	26.527	27.049	1.2594					27	16	3	0	0	0	2.3239	1	10675	10675		1.8442	0	1	541070	+		24120	9571	11976	12031	27868	27868					0.08629787750942342
PAFQVKRV	8	Unmodified	_PAFQVKRV_					0	0	0			REV__nc|ENSG00000120500|P36575-2|ARR3	REV__nc|ENSG00000120500|P36575-2|ARR3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7120849490166	3	315.527388	943.560336	0.13078	4.1264E-05	2.275	0.00071784	2.4058	0.0007591	315.52806855241306	24.774	0.7203	26.015	25.547	26.268	1.241					44	23	2	0	0	0	2.3239	1	10373	10373		1.6526	1.1943	1	951010	+		24121	9571	11976	12031	27869	27869					0.08629787750942342
PAGARGQR	8	Unmodified	_PAGARGQR_					0	0	0		ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	ENST00000417456.1_1_1:35441975-35442986:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.7285339236259	2	406.727918	811.441283	0.23017	9.3615E-05	0.87791	0.00035707	1.1081	0.00045069	406.72826948375683	70.129	0.46781	70.129	69.866	70.333	0					39	14	3	0	0	0	0.89176	1	29231	29231		0.79363	0	1	9997400			24122	6414	11977	12032	27870	27870					0.028020138460874477
PAGGPKNA	8	Unmodified	_PAGGPKNA_					0	0	0		ENST00000264552.13_1_19:55918956-55919124:-|nuORF	ENST00000264552.13_1_19:55918956-55919124:-|nuORF	ENST00000264552.13_1_19:55918956-55919124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	711.3838378787041	1	711.378414	710.371138	2.2116	0.0015733	-2.685	-0.00191	-0.4734	-0.00033677	711.3767697512753	82.655	0.36553	84.325	84.049	84.415	1.67					18	11	2	0	0	0	0.88504	1	34678	34678		5.7604	0	1	826690			24123	5649	11978	12033	27871	27871					0.004367154576016219
PAGHVGGG	8	Unmodified	_PAGHVGGG_					0	0	0			REV__ENST00000261729.9_1_12:113565884-113573876:-|nuORF	REV__ENST00000261729.9_1_12:113565884-113573876:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3235351443291	1	651.320899	650.313623	2.6307	0.0017134	0.66761	0.00043483	3.2983	0.0021482	651.3221572658667	89.632	0.94897	89.632	89.146	90.095	0					38	29	2	0	0	0	0.89176	1	37342	37342		0.79363	0	1	725520	+		24124	12186	11979	12034	27872	27872					-0.025521267479348353
PAGHVGGG	8	Unmodified	_PAGHVGGG_					0	0	0			REV__ENST00000261729.9_1_12:113565884-113573876:-|nuORF	REV__ENST00000261729.9_1_12:113565884-113573876:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	651.6562377810478	1	651.320899	650.313623	2.5213	0.0016422	2.5461	0.0016583	5.0674	0.0033005	651.325011032999	88.347	0.49828	88.582	88.291	88.789	0.23471					22	15	2	0	0	0	2.3239	1	37005	37005		0.79363	0	1	541530	+		24125	12186	11979	12034	27873	27873					-0.025521267479348353
PAGNGPPV	8	Unmodified	_PAGNGPPV_					0	0	0			REV__USHBP1|p.Q198Pfs*21|1|0.1|ENSG00000130307|chr19:17262586-17262601|GCCTCCAGGGAGGCCT/-|frameshift_variant	REV__USHBP1|p.Q198Pfs*21|1|0.1|ENSG00000130307|chr19:17262586-17262601|GCCTCCAGGGAGGCCT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0695373415947	2	354.687396	707.360239	-1.1191	-0.00039693	0.082893	2.9401E-05	-1.0362	-0.00036753	354.68726971443846	14.941	0.18978	15.711	15.58	15.77	0.76937					7	5	2	0	0	0	2.3239	1	6193	6193		0	0	1	271810	+		24126	9778	11980	12035	27874	27874					-0.0051468691667651
PAGTGGHH	8	Unmodified	_PAGTGGHH_					0	0	0			REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.1726867556572	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.091	1	92.282	91.782	92.782	0.19042								0	0	0	1.0178	1	38564	38564		0.79363	0	1		+		24127	9975	11981	12036	27875	27875					-0.04653625862010813
PAGTGGHH	8	Unmodified	_PAGTGGHH_					0	0	0			REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.1730529665947	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.207	1	92.397	91.897	92.897	0.19042								0	0	0	1.0178	1	38610	38610		0.79363	0	1		+		24128	9975	11981	12036	27876	27876					-0.04653625862010813
PAGTGGHH	8	Unmodified	_PAGTGGHH_					0	0	0			REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.1726562380791	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.333	1	92.501	92.001	93.001	0.16835								0	0	0	1.0178	1	38663	38663		0.79363	0	1		+		24129	9975	11981	12036	27877	27877					-0.04653625862010813
PAGTGGHH	8	Unmodified	_PAGTGGHH_					0	0	0			REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	REV__LRCH1|p.E457Vfs*53|1|0.03|ENSG00000136141|chr13:46701176-46701177|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.1727172732353	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.09	103.59	104.59	0.059502								0	0	0	1.0178	1	43792	43792		0.79363	0	1		+		24130	9975	11981	12036	27878	27878					-0.04653625862010813
PAHGGAGG	8	Unmodified	_PAHGGAGG_					0	0	0			REV__nc|ENSG00000099783|P52272-2|HNRNPM	REV__nc|ENSG00000099783|P52272-2|HNRNPM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.2943603396416	1	623.289599	622.282323	2.6583	0.0016569	3.8209	0.0023815	6.4792	0.0040384	623.2941150968171	70.437	0.60097	71.79	71.336	71.937	1.3536					33	18	3	0	0	0	0.88958	1	29516	29516		2.8892	0	1	1597300	+		24131	8953	11982	12037	27879	27879					-0.0439269978203356
PAHGGAGG	8	Unmodified	_PAHGGAGG_					0	0	0			REV__nc|ENSG00000099783|P52272-2|HNRNPM	REV__nc|ENSG00000099783|P52272-2|HNRNPM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	623.289599	622.282323	2.0121	0.0012541	7.304	0.0045525	9.3161	0.0058066	623.2940934113738	72.341	0.60167	72.341	71.922	72.524	0	0.28992	0.00010607	NaN	2.8892	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1006200	+		24132	8953	11982	12037							-0.0439269978203356
PAHGGAGG	8	Unmodified	_PAHGGAGG_					0	0	0			REV__nc|ENSG00000099783|P52272-2|HNRNPM	REV__nc|ENSG00000099783|P52272-2|HNRNPM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	623.289599	622.282323	1.5788	0.00098408	7.5755	0.0047217	9.1543	0.0057058	623.2947443715603	71.697	0.76335	72.021	71.527	72.29	0.32359	-0.029655	0.00027531	NaN	2.8892	36	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	897530	+		24133	8953	11982	12037							-0.0439269978203356
PAHGGAGG	8	Unmodified	_PAHGGAGG_					0	0	0			REV__nc|ENSG00000099783|P52272-2|HNRNPM	REV__nc|ENSG00000099783|P52272-2|HNRNPM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	623.289599	622.282323	2.6583	0.0016569	3.8209	0.0023815	6.4792	0.0040384	623.2941150968171	70.437	0.60097	71.79	71.336	71.937	1.3536	-0.26026	-0.0020649	NaN	2.8892	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1597300	+		24134	8953	11982	12037							-0.0439269978203356
PAHRRRVV	8	Unmodified	_PAHRRRVV_					0	0	0		ENST00000557619.5_1_14:24035015-24036327:-|nuORF;ENST00000556743.5_1_14:24034808-24036327:-|nuORF;ENST00000553629.5_1_14:24035015-24036984:-|nuORF;ENST00000460049.6_1_14:24033375-24036327:-|nuORF;ENST00000535852.6_1_14:24028960-24035624:-|nuORF	ENST00000557619.5_1_14:24035015-24036327:-|nuORF	ENST00000557619.5_1_14:24035015-24036327:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8057739138603	2	495.807034	989.599515	1.4597	0.00072372	-1.9902	-0.00098676	-0.53053	-0.00026304	495.80562942924104	73.689	0.49188	73.689	73.491	73.983	0					31	15	3	0	0	0	0.89178	1	30729	30729		0.69038	0	1	2282700			24135	6665	11983	12038	27880	27880					0.10429932825172727
PAIARRARSR	10	Unmodified	_PAIARRARSR_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8582031130791	2	577.35488	1152.69521	3.2356	0.0018681	-1.9393	-0.0011197	1.2963	0.00074843	577.3536487994854	105.97	0.1757	106.13	106.01	106.19	0.16448					15	8	3	0	0	0	0.88579	1	45181	45181		2.9952	1.151	1	23898000	+		24136	12025	11984	12039	27881	27881					0.12496660945407712
PAIETHEMLY	10	Unmodified	_PAIETHEMLY_					0	0	0		nc|ENSG00000116406|Q9BZQ6-2|EDEM3;ENSG00000116406|ENST00000318130|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.2884399294853	2	602.289356	1202.56416	0.79527	0.00047898	-1.5041	-0.00090591	-0.70885	-0.00042693	602.2888263164723	53.51	0.33277	55.48	55.357	55.69	1.9697					16	10	2	0	0	0	0.80568	1	22415	22415		11.64	2.2572	1	2558000			24137	1967	11985	12040	27882	27882					-0.029019553281386834
PAIIRTSRS	9	Unmodified	_PAIIRTSRS_					0	0	0			REV__TRIM29|p.T120Sfs*133|1|0.12|ENSG00000137699|chr11:120137655-120137673|TCGCCCTTTTCGGCAAAGG/-|frameshift_variant	REV__TRIM29|p.T120Sfs*133|1|0.12|ENSG00000137699|chr11:120137655-120137673|TCGCCCTTTTCGGCAAAGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7988769412041	2	500.79854	999.582528	2.565	0.0012845	-1.5807	-0.00079159	0.98434	0.00049296	500.79742353163886	77.43	0.40853	77.747	77.511	77.92	0.31653					32	12	3	0	0	0	0.83753	1	32383	32383		1.8442	0	1	4512000	+		24138	15924	11986	12041	27883	27883					0.08271967428697735
PAIIWPLIL	9	Unmodified	_PAIIWPLIL_					0	0	0			REV__ENST00000603542.5_1_20:10200008-10200131:-|nuORF	REV__ENST00000603542.5_1_20:10200008-10200131:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1405517458916	2	518.333696	1034.65284	3.9925	0.0020694	0.92684	0.00048041	4.9193	0.0025499	518.8350099728245	90.503	0.38869	91.869	91.638	92.027	1.366					27	11	3	0	0	0	0.11898	1	38037	38037		0	0	1	1319900	+		24139	14127	11987	12042	27884	27884					0.1368987276448479
PAKAIARA	8	Unmodified	_PAKAIARA_					0	0	0		APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2534973025322	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.42	1	27.691	27.191	28.191	1.2715								0	0	0	1.0178	1	11063	11063		2.5775	0	1				24140	69	11988	12043	27885	27885					0.08553543171080946
PAKFEFQSEQK	11	Unmodified	_PAKFEFQSEQK_					0	0	0			REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1	REV__nc|ENSG00000151276|Q96QZ7-4|MAGI1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	446.5655700564384	3	446.894465	1337.66157	0.65848	0.00029427	-2.6112	-0.0011669	-1.9527	-0.00087264	446.8935237686593	11.855	0.31301	11.944	11.805	12.118	0.089381					22	9	4	0	0	0	0.14606	1	4883	4883		2.4348	0.18206	1	25722000	+		24141	10398	11989	12044	27886	27886					0.006241498723284167
PAKKYVKLRF	10	Unmodified	_PAKKYVKLRF_					0	0	0		ENSG00000116133|ENST00000371269|DHCR24;nc|ENSG00000116133|Q15392-2|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	MSMS	GG20161007_CRH_Patient100_A02_01	1	625.3909789919853	2	625.392608	1248.77066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.45	1	108.45	107.95	108.95	0								0	0	0	0.6624	1	46734	46734		0.40072	0	1				24142	1951	11990	12045	27887	27887					0.15622825353102598
PAKNGAGS	8	Unmodified	_PAKNGAGS_					0	0	0		ENSG00000126822|ENST00000247226|PLEKHG3;nc|ENSG00000126822|A1L390-3|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	701.3611328005791	1	701.357679	700.350402	2.6982	0.0018924	0.012966	9.0935E-06	2.7111	0.0019015	701.3591013239015	104.64	0.099808	104.7	104.62	104.72	0.056808					14	4	4	0	0	0	0.89178	1	44171	44171		0.69038	0	1	39337000			24143	2319	11991	12046	27888	27888					-0.01175874922046205
PAKNGAGS	8	Unmodified	_PAKNGAGS_					0	0	0		ENSG00000126822|ENST00000247226|PLEKHG3;nc|ENSG00000126822|A1L390-3|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	ENSG00000126822|ENST00000247226|PLEKHG3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	701.357679	700.350402	2.5513	0.0017894	0.21175	0.00014851	2.7631	0.0019379	701.3581764020877	104.57	0.098694	104.75	104.67	104.77	0.1731	0.024979	2.4435E-05	NaN	0.69038	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9823300			24144	2319	11991	12046							-0.01175874922046205
PAKVAIVI	8	Unmodified	_PAKVAIVI_					0	0	0			REV__ENST00000441743.1_1_22:21622636-21623056:+|nuORF	REV__ENST00000441743.1_1_22:21622636-21623056:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	405.5246765017509	2	405.776014	809.537475	-0.10802	-4.383E-05	-0.89343	-0.00036253	-1.0014	-0.00040636	405.77560874161867	29.748	1.0152	29.748	29.423	30.439	0					48	32	2	0	0	0	2.3239	1	12469	12469		0	0	1	5913700	+		24145	10927	11992	12047	27889	27889					0.12508768633449563
PAKVVFLR	8	Unmodified	_PAKVVFLR_					0	0	0			REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1348754763603	3	310.535884	928.585822	1.0365	0.00032188	1.6107	0.00050019	2.6473	0.00082207	310.53643843686694	49.766	0.88046	50.097	49.758	50.639	0.33019					45	27	2	0	0	0	2.3239	1	21039	21039		0	0	1	6202000	+		24146	8960	11993	12048	27890	27890					0.11867262273369761
PAKVVFLR	8	Unmodified	_PAKVVFLR_					0	0	0			REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1344787478447	3	310.535884	928.585822	1.5607	0.00048466	0.65452	0.00020325	2.2153	0.00068792	310.5361359352386	47.991	0.86245	49.968	49.744	50.607	1.9772					42	27	2	0	0	0	2.3239	1	20339	20339		0	0	1	4197200	+		24147	8960	11993	12048	27891	27891					0.11867262273369761
PAKVVFLR	8	Unmodified	_PAKVVFLR_					0	0	0			REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	REV__ENST00000464335.5_1_22:30795691-30811950:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1346923708916	3	310.535884	928.585822	1.0821	0.00033603	1.5622	0.00048513	2.6443	0.00082116	310.53634089387907	49.138	0.80634	51.115	50.7	51.506	1.9772					43	25	2	0	0	0	2.3239	1	20459	20459		0	0	1	3244300	+		24148	8960	11993	12048	27892	27892					0.11867262273369761
PALATALAL	9	Unmodified	_PALATALAL_					0	0	0		ENSG00000182534|ENST00000449428|MXRA7;nc|ENSG00000182534|P84157-3|MXRA7;nc|ENSG00000182534|P84157|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	840.5187866091728	1	840.518931	839.511654	2.0934	0.0017596	-0.99661	-0.00083767	1.0968	0.00092189	840.5178559223959	60.221	0.22311	60.221	60.124	60.348	0					11	7	2	0	0	0	0.10722	1	25119	25119		46.921	8.7697	1	553860			24149	4619	11994	12049	27893	27893					0.08547874391160803
PALATALAL	9	Unmodified	_PALATALAL_					0	0	0		ENSG00000182534|ENST00000449428|MXRA7;nc|ENSG00000182534|P84157-3|MXRA7;nc|ENSG00000182534|P84157|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	840.5212280154228	1	840.518931	839.511654	2.3694	0.0019916	1.0805	0.0009082	3.45	0.0028998	840.5195050028094	59.653	0.28292	59.979	59.838	60.121	0.32553					12	8	2	0	0	0	0.10722	1	25004	25004		46.921	8.7697	1	525580			24150	4619	11994	12049	27894	27894					0.08547874391160803
PALATALAL	9	Unmodified	_PALATALAL_					0	0	0		ENSG00000182534|ENST00000449428|MXRA7;nc|ENSG00000182534|P84157-3|MXRA7;nc|ENSG00000182534|P84157|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	840.3387939333916	1	840.518931	839.511654	0.87652	0.00073673	-0.29525	-0.00024817	0.58126	0.00048856	840.5192484652979	58.523	0.28389	59.941	59.815	60.099	1.4181					11	8	2	0	0	0	0.028457	1	24551	24551		56.541	12.134	1	1082100			24151	4619	11994	12049	27895	27895					0.08547874391160803
PALATALAL	9	Unmodified	_PALATALAL_					0	0	0		ENSG00000182534|ENST00000449428|MXRA7;nc|ENSG00000182534|P84157-3|MXRA7;nc|ENSG00000182534|P84157|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	ENSG00000182534|ENST00000449428|MXRA7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	840.3375121951103	1	840.518931	839.511654	0.62634	0.00052645	-1.4994	-0.0012603	-0.87307	-0.00073383	840.5165242220453	58.009	0.18147	59.978	59.871	60.053	1.969					8	5	2	0	0	0	0.047334	1	24314	24314		46.921	16.696	1	968440			24152	4619	11994	12049	27896	27896					0.08547874391160803
PALATIEK	8	Unmodified	_PALATIEK_					0	0	0			REV__ENST00000415776.1_1_Y:19868883-19869072:-|nuORF	REV__ENST00000415776.1_1_Y:19868883-19869072:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7521545290947	2	421.752736	841.490919	1.7023	0.00071795	-2.6807	-0.0011306	-0.97843	-0.00041265	421.75146598925136	70.838	0.7754	71.161	70.592	71.367	0.32359					51	24	3	0	0	0	0.89008	1	29644	29644		2.5775	0	1	5187000	+		24153	12942	11995	12050	27897	27897					0.06383284011519663
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7829467654228	2	433.782162	865.549771	0.97724	0.00042391	-2.4414	-0.001059	-1.4641	-0.00063511	433.78103734052144	36.759	0.46273	36.759	36.546	37.009	0					52	25	3	0	0	0	0.89008	1	15333	15333		2.5775	0	1	13643000	+		24154	9043	11996	12051	27898	27898					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7826721072197	2	433.782162	865.549771	1.0972	0.00047595	-0.74207	-0.0003219	0.35514	0.00015405	433.7818644889677	39.66	2.1918	39.66	38.953	41.145	0					173	69	3	0	0	0	0.89008	2	16828	16828;17030		2.5775	0	1	12945000	+		24155	9043	11996	12051	27899;27900	27899					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.7819091677666	2	433.782162	865.549771	1.9566	0.00084876	-3.2404	-0.0014056	-1.2838	-0.00055688	433.78080058444726	37.953	0.42001	38.258	38.193	38.613	0.30497					55	28	2	0	0	0	0.89008	2	16017	16017;16092		2.5775	0	1	10295000	+		24156	9043	11996	12051	27901;27902	27901					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.7820922732353	2	433.782162	865.549771	1.9837	0.00086052	-2.0866	-0.00090511	-0.10281	-4.4597E-05	433.78111746630185	38.422	0.83803	38.731	38.617	39.455	0.30857					58	33	2	0	0	0	0.89008	1	16214	16214		2.5775	0	1	3156000	+		24157	9043	11996	12051	27903	27903					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	434.0324584841728	2	433.782162	865.549771	1.9566	0.00084876	-3.2404	-0.0014056	-1.2838	-0.00055688	433.78080058444726	37.953	0.42001	38.258	38.193	38.613	0.30497					55	28	2	0	0	0	2.3239	1	15974	15974		2.5775	0	1	10295000	+		24158	9043	11996	12051	27904	27904					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	434.0333434939384	2	433.782162	865.549771	1.9837	0.00086052	-2.0866	-0.00090511	-0.10281	-4.4597E-05	433.78111746630185	38.422	0.83803	38.731	38.617	39.455	0.30857					58	33	2	0	0	0	2.3239	1	16256	16256		2.5775	0	1	3156000	+		24159	9043	11996	12051	27905	27905					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.7816039919853	2	433.782162	865.549771	0.50214	0.00021782	-1.2865	-0.00055806	-0.78436	-0.00034024	433.78132539011784	34.916	0.15119	36.19	36.126	36.277	1.2746					23	12	2	0	0	0	0.89008	1	14640	14640		2.5775	0	1	20462000	+		24160	9043	11996	12051	27906	27906					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.7815429568291	2	433.782162	865.549771	0.46439	0.00020144	-2.0985	-0.0009103	-1.6341	-0.00070886	433.78119478897327	35.225	0.98882	36.5	36.277	37.266	1.2746					130	82	2	0	0	0	0.89008	1	14835	14835		2.5775	0	1	25409000	+		24161	9043	11996	12051	27907	27907					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.0330383181572	2	433.782162	865.549771	0.50214	0.00021782	-1.2865	-0.00055806	-0.78436	-0.00034024	433.78132539011784	34.916	0.15119	36.19	36.126	36.277	1.2746					23	12	2	0	0	0	2.3239	1	14678	14678		2.5775	0	1	20462000	+		24162	9043	11996	12051	27908	27908					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.7817565798759	2	433.782162	865.549771	0.88926	0.00038574	-3.2139	-0.0013941	-2.3246	-0.0010084	433.7807222797613	33.551	0.19683	35.374	35.202	35.399	1.8227					25	16	3	0	0	0	0.89008	1	14061	14061		2.5775	0	1	115760000	+		24163	9043	11996	12051	27909	27909					0.11161805096503485
PALGRKKP	8	Unmodified	_PALGRKKP_					0	0	0			REV__ENSG00000101596|ENST00000320876|SMCHD1	REV__ENSG00000101596|ENST00000320876|SMCHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	433.782162	865.549771	0.86501	0.00037522	-2.9829	-0.0012939	-2.1179	-0.00091872	433.7807829910979	34.88	0.50135	36.698	36.393	36.894	1.8176	0.045608	-0.00045531	NaN	2.5775	73	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	35272000	+		24164	9043	11996	12051							0.11161805096503485
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	823.5433227419853	1	823.54	822.532724	1.2484	0.0010281	3.0872	0.0025424	4.3356	0.0035705	823.5424548140634	106.26	0.1337	106.26	106.17	106.31	0					15	6	3	0	0	0	0.89198	1	45298	45298		0	0	1	22635000	+		24165	11012	11997	12052	27910	27910					0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2744628787041	2	412.273638	822.532724	0.042253	1.742E-05	1.9543	0.00080573	1.9966	0.00082315	412.2744276893451	107.87	0.29025	107.87	107.74	108.03	0					46	15	4	0	0	0	0.89198	2	46306	46306;46380		0	0	1	1934699999.9999998	+		24166	11012	11997	12052	27911;27912	27911					0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	823.5424072146416	1	823.54	822.532724	1.2484	0.0010281	0.39171	0.00032259	1.6401	0.0013507	823.5401234679651	107.87	0.25245	107.87	107.74	107.99	0					34	13	3	0	0	0	0.89198	2	46309	46309;46384		0	0	1	1569299999.9999998	+		24167	11012	11997	12052	27913;27914	27913					0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	823.5425903201103	1	823.54	822.532724	2.7686	0.0022801	0.53139	0.00043762	3.3	0.0027177	823.539895389678	106.22	0.13927	106.28	106.19	106.33	0.05455					16	6	3	0	0	0	0.89198	1	45211	45211		0	0	1	23290000	+		24168	11012	11997	12052	27915	27915					0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	823.54	822.532724	1.2484	0.0010281	3.0872	0.0025424	4.3356	0.0035705	823.5424548140634	106.26	0.1337	106.26	106.17	106.31	0	-0.041371	0.0019922	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22635000	+		24169	11012	11997	12052							0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.273638	822.532724	0.042253	1.742E-05	1.9543	0.00080573	1.9966	0.00082315	412.2744276893451	107.87	0.29025	107.87	107.74	108.03	0	0	0	NaN	0	46	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1934699999.9999998	+		24170	11012	11997	12052							0.11435884490708759
PALKPGLK	8	Unmodified	_PALKPGLK_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	823.54	822.532724	2.7686	0.0022801	0.53139	0.00043762	3.3	0.0027177	823.539895389678	106.22	0.13927	106.28	106.19	106.33	0.05455	-0.01846	-0.00011259	NaN	0	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23290000	+		24171	11012	11997	12052							0.11435884490708759
PALKRANIR	9	Unmodified	_PALKRANIR_					0	0	0		ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.8320800662041	2	519.830175	1037.6458	2.9163	0.001516	-0.029464	-1.5316E-05	2.8868	0.0015007	519.8302167908148	107.62	0.19022	107.67	107.58	107.77	0.052444					26	9	4	0	0	0	0.83213	1	46064	46064		2.0598	0	1	69172000			24172	5314	11998	12053	27916	27916					0.12847952936590445
PALKRANIR	9	Unmodified	_PALKRANIR_					0	0	0		ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	ENSG00000234828|ENST00000636793|IQCM	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	519.830175	1037.6458	3.3128	0.0017221	-0.24466	-0.00012718	3.0681	0.0015949	519.8302265433025	107.6	0.18365	107.76	107.64	107.83	0.15781	0.045047	-0.00036132	NaN	2.0598	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	161640000			24173	5314	11998	12053							0.12847952936590445
PALLVRGRNRR	11	Unmodified	_PALLVRGRNRR_					0	0	0			REV__ENST00000504707.1_1_4:120981275-120987923:-|nuORF	REV__ENST00000504707.1_1_4:120981275-120987923:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.1422607302666	4	327.708731	1306.80582	1.1594	0.00037995	-0.43747	-0.00014336	0.72195	0.00023659	327.70882627501527	53.107	0.36933	53.43	53.23	53.599	0.32283					15	11	2	0	0	0	0.14606	1	22317	22317		0.50596	0	1	819990	+		24174	13527	11999	12054	27917	27917					0.16468880933621222
PALPKSGK	8	Unmodified	_PALPKSGK_					0	0	0		nc|ENSG00000178795|Q6W3E5|GDPD4	nc|ENSG00000178795|Q6W3E5|GDPD4	nc|ENSG00000178795|Q6W3E5|GDPD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2510558962822	2	399.247621	796.480688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.89	1	24.104	23.604	24.604	1.2145								0	0	0	1.0178	1	9567	9567		2.3027	0	1				24175	7937	12000	12055	27918	27918					0.07430721076957525
PALPLSLPLL	10	Unmodified	_PALPLSLPLL_					0	0	0		ENST00000474383.1_1_7:151534428-151573717:-|nuORF	ENST00000474383.1_1_7:151534428-151573717:-|nuORF	ENST00000474383.1_1_7:151534428-151573717:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2274963259697	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.29	1	104.45	103.95	104.95	0.16055								0	0	0	0.66218	1	44139	44139		0.77653	0	1				24176	6771	12001	12056	27919	27919					0.1432955155628406
PALWKARV	8	Unmodified	_PALWKARV_					0	0	0		ENST00000269919.10_1_19:18475054-18475243:+|nuORF	ENST00000269919.10_1_19:18475054-18475243:+|nuORF	ENST00000269919.10_1_19:18475054-18475243:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7117492556572	3	314.19575	939.565421	0.24941	7.8364E-05	1.42	0.00044616	1.6694	0.00052452	314.1961276972356	26.665	0.54805	26.926	26.592	27.14	0.26173					23	17	2	0	0	0	2.3239	1	11148	11148		1.8442	0.6509	1	363800			24177	5673	12002	12057	27920	27920					0.09322091613557859
PALWRWLLL	9	Unmodified	_PALWRWLLL_					0	0	0		COL4A2|p.R14W|1|0.4|ENSG00000134871|chr13:110307943-110307943|C/T|missense_variant	COL4A2|p.R14W|1|0.4|ENSG00000134871|chr13:110307943-110307943|C/T|missense_variant	COL4A2|p.R14W|1|0.4|ENSG00000134871|chr13:110307943-110307943|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3565551638603	2	584.355494	1166.69644	1.4373	0.00083989	2.6301	0.0015369	4.0674	0.0023768	584.3577794609562	71.187	0.64151	71.51	71.207	71.848	0.32359					29	19	2	0	0	0	0.84963	1	29807	29807		0.6015	0.076735	1	998210			24178	321	12003	12058	27921	27921					0.11975482261595971
PAMHPPSH	8	Unmodified	_PAMHPPSH_					0	0	0		ENST00000352432.8_2_3:10370089-10370329:-|nuORF	ENST00000352432.8_2_3:10370089-10370329:-|nuORF	ENST00000352432.8_2_3:10370089-10370329:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2065002322197	2	437.20543	872.396307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.893	1	52.893	52.393	53.393	0								0	0	0	1.0178	1	22058	22058		0.79363	0	1				24179	5971	12004	12059	27922	27922					-0.04499553011464741
PAMWFAER	8	Unmodified	_PAMWFAER_					0	0	0		ENST00000358075.10_1_X:77082435-77082549:-|nuORF	ENST00000358075.10_1_X:77082435-77082549:-|nuORF	ENST00000358075.10_1_X:77082435-77082549:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2410766482353	2	504.242012	1006.46947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.692	1	97.692	97.192	98.192	0								0	0	0	1.0178	1	40844	40844		9.3474	2.0582	1				24180	6007	12005	12060	27923	27923					-0.033504242888511726
PAMYGHTGRH	10	Oxidation (M)	_PAM(Oxidation (M))YGHTGRH_		PAM(1)YGHTGRH		PAM(42)YGHTGRH	0	0	1			REV__ENST00000533077.5_1_11:67049840-67050700:+|nuORF	REV__ENST00000533077.5_1_11:67049840-67050700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	381.5114318728447	3	381.51018	1141.50871	0.19803	7.5549E-05	1.8224	0.00069527	2.0204	0.00077081	381.51134444353505	14.465	4.0246	14.578	12.331	16.355	0.11295					244	129	2	0	0	0	0.25434	1	5766	5766		42.312	17.322	1	3205700	+		24181	12946	12006	12061	27924	27924		121			-0.05638324005258255
PANLEKLL	8	Unmodified	_PANLEKLL_					0	0	0		tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	tr|A0A553SJP1|A0A553SJP1_NIACIAlpha-1,4glucanphosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_17280PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	448.8858215212822	2	449.273835	896.533118	2.5315	0.0011373	-1.2269	-0.0005512	1.3046	0.00058614	449.2733686844584	40	0.30542	41.31	41.148	41.453	1.3102					11	9	2	0	0	0	2.3239	1	16763	16763		5.2307	0	1	454170			24182	16256	12007	12062	27925	27925					0.08071259419898524
PAPASHSS	8	Unmodified	_PAPASHSS_					0	0	0			REV__ENST00000568164.1_1_16:75148422-75149226:-|nuORF	REV__ENST00000568164.1_1_16:75148422-75149226:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.1790344119072	2	377.179935	752.345317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.602	1	32.896	32.396	33.396	0.29431								0	0	0	1.0178	1	13684	13684		0.79363	0	1		+		24183	13946	12008	12063	27926	27926					-0.040761787846577135
PAPEDSLASV	10	Unmodified	_PAPEDSLASV_					0	0	0		ENST00000569585.1_1_16:1822224-1822659:-|nuORF;ENSG00000074071|ENST00000397375|MRPS34	ENST00000569585.1_1_16:1822224-1822659:-|nuORF	ENST00000569585.1_1_16:1822224-1822659:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2453185915947	2	493.245472	984.476391	0.65829	0.0003247	1.085	0.0005352	1.7433	0.00085989	493.24612417314887	22.584	0.47429	22.584	22.276	22.75	0					27	15	2	0	0	0	0.78468	1	9310	9310		13.906	1.3745	1	2370700			24184	909	12009	12064	27927	27927					-0.0164683292726977
PAPIILAIII	10	Unmodified	_PAPIILAIII_					0	0	0		tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	tr|A0A553SQD0|A0A553SQD0_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_24055PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2393981814384	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.513	1	25.513	25.013	26.013	0								0	0	0	0.66237	1	10648	10648		0.15932	0	1				24185	16513	12010	12065	27928	27928					0.17966428452996297
PAPNLFEL	8	Unmodified	_PAPNLFEL_					0	0	0			REV__nc|ENSG00000154025|A0PJK1-5|SLC5A10	REV__nc|ENSG00000154025|A0PJK1-5|SLC5A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7466308474541	2	450.744911	899.475269	1.8947	0.00085403	-0.027732	-1.25E-05	1.867	0.00084153	450.744786281513	49.54	0.3787	51.517	51.286	51.665	1.9772					22	11	3	0	0	0	0.84871	1	20707	20707		16.942	3.4344	1	2347000	+		24186	10458	12011	12066	27929	27929					0.0215099749447063
PAPRRLRRRR	10	Unmodified	_PAPRRLRRRR_					0	0	0		ENST00000360807.8_2_20:17641169-17662761:-|nuORF;ENST00000377813.5_2_20:17660668-17662761:-|nuORF	ENST00000360807.8_2_20:17641169-17662761:-|nuORF	ENST00000360807.8_2_20:17641169-17662761:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1206237673759	3	445.288589	1332.84394	1.723	0.00076722	-1.128	-0.00050228	0.59499	0.00026494	445.28812335083484	50.047	0.69807	52.024	51.758	52.456	1.9772					35	22	2	0	0	0	0.12559	1	20912	20912		0.15932	0	1	6263400			24187	6032	12012	12067	27930	27930					0.19082811638963904
PAPRVALRAV	10	Unmodified	_PAPRVALRAV_					0	0	0			REV__ENST00000228705.6_1_12:63328520-63328631:-|nuORF	REV__ENST00000228705.6_1_12:63328520-63328631:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	351.2429382205009	3	350.557459	1048.65055	-2.1738	-0.00076204	1.87	0.00065554	-0.3038	-0.0001065	350.5581690433555	18.631	0.15379	18.631	18.554	18.708	0					6	4	2	0	0	0	0.12556	1	7772	7772		0.69767	0	1	238860	+		24188	12096	12013	12068	27931	27931					0.12816837079344623
PAQKLLLSGT	10	Unmodified	_PAQKLLLSGT_					0	0	0		ENST00000524413.5_1_10:25313092-25313269:+|nuORF	ENST00000524413.5_1_10:25313092-25313269:+|nuORF	ENST00000524413.5_1_10:25313092-25313269:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.0558959841728	3	343.209725	1026.60735	-1.4567	-0.00049995	-3.9099	-0.0013419	-5.3666	-0.0018419	343.2084004726737	40.707	0.31028	40.707	40.549	40.859	0					14	9	2	0	0	0	0.12559	1	17048	17048		0.15932	0	1	559150			24189	7109	12014	12069	27932	27932					0.09510602511431898
PAQKLRNN	8	Unmodified	_PAQKLRNN_					0	0	0		nc|ENSG00000165816|Q5GFL6-3|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1808044314384	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.465	1	16.465	15.965	16.965	0								0	0	0	1.0178	1	6835	6835		0.40072	0	1				24190	3861	12015	12070	27933	27933					0.05283125223127172
PAQKLRNN	8	Unmodified	_PAQKLRNN_					0	0	0		nc|ENSG00000165816|Q5GFL6-3|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1808349490166	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.779	1	16.779	16.279	17.279	0								0	0	0	1.0178	1	6964	6964		0.40072	0	1				24191	3861	12015	12070	27934	27934					0.05283125223127172
PAQKLRNN	8	Unmodified	_PAQKLRNN_					0	0	0		nc|ENSG00000165816|Q5GFL6-3|VWA2;nc|ENSG00000165816|Q5GFL6-2|VWA2;ENSG00000165816|ENST00000392982|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	nc|ENSG00000165816|Q5GFL6-3|VWA2	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1805908083916	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.995	1	16.995	16.495	17.495	0								0	0	0	1.0178	1	7054	7054		0.40072	0	1				24192	3861	12015	12070	27935	27935					0.05283125223127172
PAQPGPAA	8	Unmodified	_PAQPGPAA_					0	0	0		ENSG00000131398|ENST00000477616|KCNC3	ENSG00000131398|ENST00000477616|KCNC3	ENSG00000131398|ENST00000477616|KCNC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0692016482353	2	354.687396	707.360239	-0.2168	-7.6895E-05	-2.6896	-0.00095395	-2.9064	-0.0010308	354.6864432458969	14.86	0.1845	15.757	15.62	15.805	0.89664					8	5	2	0	0	0	2.3239	1	6143	6143		2.8892	0	1	329970			24193	2489	12016	12071	27936	27936					-0.005146869166878787
PARLPLALTK	10	Unmodified	_PARLPLALTK_					0	0	0			REV__ENSG00000137463|ENST00000398955|MGARP	REV__ENSG00000137463|ENST00000398955|MGARP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3497802615166	2	540.350409	1078.68626	2.7052	0.0014617	-3.3367	-0.001803	-0.63154	-0.00034125	540.348566859883	93.813	0.34954	93.958	93.751	94.101	0.14493					23	10	3	0	0	0	0.89803	1	39239	39239		0.40072	0	1	1504300	+		24194	10020	12017	12072	27937	27937					0.1500687453633418
PARLRRKAYI	10	Unmodified	_PARLRRKAYI_					0	0	0		tr|A0A553ST29|A0A553ST29_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04160PE=4SV=1	tr|A0A553ST29|A0A553ST29_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04160PE=4SV=1	tr|A0A553ST29|A0A553ST29_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_04160PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1346923708916	4	311.699104	1242.76731	-2.0008	-0.00062365	-1.5049	-0.00046908	-3.5057	-0.0010927	311.69883046243865	50.485	0.18996	50.485	50.405	50.595	0					6	5	2	0	0	0	0.12561	1	21090	21090		0	0	1	118840			24195	16635	12018	12073	27938	27938					0.15563575299120203
PARNCKEL	8	Unmodified	_PARNCKEL_					0	0	0			REV__ENST00000561824.5_1_16:30212049-30214087:+|nuORF	REV__ENST00000561824.5_1_16:30212049-30214087:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.4891845583916	1	930.482562	929.475285	4.3325	0.0040314	-0.14764	-0.00013737	4.1849	0.003894	930.4827446511174	86.369	0.53951	87.916	87.663	88.203	1.547					47	19	3	0	0	0	0.89176	1	36330	36330		0.79363	0	1	8611000	+		24196	11839	12019	12074	27939	27939					0.007726742228101102
PARRVLPRRL	10	Unmodified	_PARRVLPRRL_					0	0	0			REV__ENST00000264235.12_2_3:119812650-119812956:-|nuORF	REV__ENST00000264235.12_2_3:119812650-119812956:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9012634158134	4	309.205825	1232.79419	-2.0566	-0.00063592	1.6048	0.00049621	-0.45185	-0.00013971	309.20556198540055	58.059	0.99892	58.059	57.817	58.816	0					46	30	2	0	0	0	0.12561	1	24436	24436		0	0	1	568520	+		24197	12212	12020	12075	27940	27940					0.18710683910308035
PARRVLPRRL	10	Unmodified	_PARRVLPRRL_					0	0	0			REV__ENST00000264235.12_2_3:119812650-119812956:-|nuORF	REV__ENST00000264235.12_2_3:119812650-119812956:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	4	309.205825	1232.79419	-2.0891	-0.00064596	4.2447	0.0013125	2.1556	0.00066651	309.4586927629718	46.172	1.4734	46.172	45.187	46.66	0					83	46	3	0	0	0	0.12561	1	19333	19333		0	0	1	407570	+		24198	12212	12020	12075	27941	27941					0.18710683910308035
PARTTKRRPI	10	Unmodified	_PARTTKRRPI_					0	0	0			REV__ENST00000574260.1_1_17:4891116-4891512:+|nuORF	REV__ENST00000574260.1_1_17:4891116-4891512:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2498657107353	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.99	1	24.233	23.733	24.733	0.24251								0	0	0	0.66161	1	10006	10006		1.7423	0.089654	1		+		24199	13977	12021	12076	27942	27942					0.14134698402403956
PASLVVLFQLL	11	Unmodified	_PASLVVLFQLL_					0	0	0		ENSG00000167077|ENST00000401548|MEI1;nc|ENSG00000167077|Q5TIA1-5|MEI1;nc|ENSG00000167077|Q5TIA1-3|MEI1;nc|ENSG00000167077|Q5TIA1-2|MEI1	ENSG00000167077|ENST00000401548|MEI1	ENSG00000167077|ENST00000401548|MEI1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1170226931572	4	300.690413	1198.73255	1.0746	0.00032312	1.8862	0.00056717	2.9608	0.0008903	300.9415828389574	44.907	0.94068	45.234	45.014	45.955	0.32674					36	31	2	0	0	0	0.14606	1	19037	19037		0.08335	0	1	1101900			24200	3945	12022	12077	27943	27943					0.14112894647792018
PASPLMHI	8	Unmodified	_PASPLMHI_					0	0	0		ENST00000539757.1_1_12:9440801-9462940:+|nuORF;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9-3|DDX11;ENSG00000013573|ENST00000542838|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000013573|Q96FC9|DDX11;ENST00000539049.5_1_12:31242373-31253526:+|nuORF;ENST00000435753.6_1_12:31242373-31254792:+|nuORF;ENST00000536265.5_1_12:31242773-31256767:+|nuORF	ENST00000539757.1_1_12:9440801-9462940:+|nuORF	ENST00000539757.1_1_12:9440801-9462940:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2346679568291	2	433.233656	864.452759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.287	1	44.614	44.114	45.114	0.32674								0	0	0	1.0178	1	18593	18593		6.3541	3.4649	1				24201	587	12023	12078	27944	27944					0.015110748252027406
PASRRRVV	8	Unmodified	_PASRRRVV_					0	0	0		ENST00000566581.5_1_15:34656349-34659376:-|nuORF;ENSG00000176454|ENST00000314891|LPCAT4	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	ENST00000566581.5_1_15:34656349-34659376:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	314.7122985720634	3	314.198154	939.572632	-2.8969	-0.00091021	-2.5128	-0.00078952	-5.4097	-0.0016997	314.19720272227255	26.309	0.74689	26.309	26.057	26.804	0					33	24	2	0	0	0	2.3239	1	11046	11046		0.45834	0	1	741000			24202	4411	12024	12079	27945	27945					0.10042824213985568
PAVKVKLF	8	Unmodified	_PAVKVKLF_					0	0	0		nc|ENSG00000163618|Q9ULU8-2|CADPS;nc|ENSG00000163618|Q9ULU8-3|CADPS;ENSG00000163618|ENST00000383710|CADPS;nc|ENSG00000163618|Q9ULU8-4|CADPS	nc|ENSG00000163618|Q9ULU8-2|CADPS	nc|ENSG00000163618|Q9ULU8-2|CADPS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.0347167849541	3	301.200501	900.579674	1.1736	0.0003535	2.389	0.00071956	3.5626	0.0010731	301.2012373252567	44.299	0.7606	45.665	45.389	46.149	1.3653					35	23	2	0	0	0	2.3239	1	18763	18763		0	0	1	4465500			24203	3703	12025	12080	27946	27946					0.12540744041848484
PAVLILHLKRF	11	Unmodified	_PAVLILHLKRF_					0	0	0		ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-3|USP45	ENSG00000123552|ENST00000500704|USP45	ENSG00000123552|ENST00000500704|USP45	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	327.0090209841728	4	327.464404	1305.82851	-1.8594	-0.00060889	0.81483	0.00026683	-1.0446	-0.00034206	327.46493256078776	45.004	0.409	45.004	44.841	45.25	0					19	12	2	0	0	0	0.14606	1	18768	18768		0	0	1	525220			24204	2194	12026	12081	27947	27947					0.18783087278552557
PAVPLRSYK	9	Unmodified	_PAVPLRSYK_					0	0	0			REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	REV__ENST00000544702.5_1_12:7248989-7252531:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2060729861259	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.48	1	16.519	16.019	17.019	1.0392								0	0	0	0.42693	1	6422	6422		1.0715	0	1		+		24205	10098	12027	12082	27948	27948					0.08350039576816926
PAVRLRRR	8	Unmodified	_PAVRLRRR_					0	0	0			REV__ENST00000588144.2_1_18:56337845-56339000:-|nuORF	REV__ENST00000588144.2_1_18:56337845-56339000:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1024.165454089642	1	1023.66464	1022.65736	2.4649	0.0025233	0.4054	0.00041499	2.8703	0.0029383	1023.666705878801	86.072	0.50224	87.199	86.864	87.366	1.1265					24	20	2	0	0	0	2.3239	1	36084	36084		0	0	1	7614700	+		24206	14042	12028	12083	27949	27949					0.14694194750609313
PAVSTSPPR	9	Unmodified	_PAVSTSPPR_					0	0	0			REV__ENSG00000170396|ENST00000302277|ZNF804A	REV__ENSG00000170396|ENST00000302277|ZNF804A	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.2532836794853	2	456.250892	910.48723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.954	1	41.271	40.771	41.771	0.31683								0	0	0	0.42693	1	17211	17211		1.6526	0	1		+		24207	10985	12029	12084	27950	27950					0.028406142376638854
PAVSTSPPR	9	Unmodified	_PAVSTSPPR_					0	0	0			REV__ENSG00000170396|ENST00000302277|ZNF804A	REV__ENSG00000170396|ENST00000302277|ZNF804A	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.2542297244072	2	456.250892	910.48723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.058	1	41.375	40.875	41.875	0.31683								0	0	0	0.42693	1	17253	17253		1.6526	0	1		+		24208	10985	12029	12084	27951	27951					0.028406142376638854
PAWARRRKLLL	11	Unmodified	_PAWARRRKLLL_					0	0	0		chr6:73493238-73518354|173|28.5|0.11|8.03|-|2|TE_info:AluSq,AluSq_dup6267,Alu,SINE,acceptor,-,73492995,73493238|None,EEF1A1|3	chr6:73493238-73518354|173|28.5|0.11|8.03|-|2|TE_info:AluSq,AluSq_dup6267,Alu,SINE,acceptor,-,73492995,73493238|None,EEF1A1|3	chr6:73493238-73518354|173|28.5|0.11|8.03|-|2|TE_info:AluSq,AluSq_dup6267,Alu,SINE,acceptor,-,73492995,73493238|None,EEF1A1|3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.1520873904228	4	345.724116	1378.86736	0.94902	0.0003281	2.7688	0.00095724	3.7178	0.0012853	345.97583978878936	34.513	0.40664	34.812	34.602	35.008	0.29942					21	14	2	0	0	0	0.14606	1	14531	14531		0.50596	0.41111	1	1001700			24209	276	12030	12085	27952	27952					0.19307812632951027
PAYPIILLRPR	11	Unmodified	_PAYPIILLRPR_					0	0	0			REV__ENST00000487567.2_2_1:236687405-236687798:-|nuORF	REV__ENST00000487567.2_2_1:236687405-236687798:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	327.2133972048759	4	327.959221	1307.80778	-0.16335	-5.3573E-05	4.2735	0.0014015	4.1101	0.001348	328.2118858149803	52.165	0.19157	53.562	53.46	53.652	1.3966					7	5	2	0	0	0	0.14606	1	21803	21803		0.50596	0	1	277460	+		24210	13402	12031	12086	27953	27953					0.1661849689887731
PCASACTT	8	Unmodified	_PCASACTT_					0	0	0		ENST00000498136.5_1_3:183904390-183904651:+|nuORF	ENST00000498136.5_1_3:183904390-183904651:+|nuORF	ENST00000498136.5_1_3:183904390-183904651:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.1493408083916	2	377.148932	752.28331	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.602	1	87.836	87.336	88.336	0.23471								0	0	0	1.0178	1	36732	36732		2.5775	0	1				24211	6967	12032	12087	27954	27954					-0.10273989519680526
PCCFCCCTC	9	Unmodified	_PCCFCCCTC_					0	0	0			REV__ENSG00000114698|ENST00000354952|PLSCR4	REV__ENSG00000114698|ENST00000354952|PLSCR4	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.0845214724541	3	328.085452	981.234528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.044	1	85.232	84.732	85.732	1.1879								0	0	0	0.42693	1	35268	35268		0	0	1		+		24212	9415	12033	12088	27955	27955					-0.2568400873859673
PCCFCCCTC	9	Unmodified	_PCCFCCCTC_					0	0	0			REV__ENSG00000114698|ENST00000354952|PLSCR4	REV__ENSG00000114698|ENST00000354952|PLSCR4	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.0844604372978	3	328.085452	981.234528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.162	1	85.35	84.85	85.85	1.1879								0	0	0	0.42693	1	35317	35317		0	0	1		+		24213	9415	12033	12088	27956	27956					-0.2568400873859673
PCCFCCCTC	9	Unmodified	_PCCFCCCTC_					0	0	0			REV__ENSG00000114698|ENST00000354952|PLSCR4	REV__ENSG00000114698|ENST00000354952|PLSCR4	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.0843078494072	3	328.085452	981.234528	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.505	1	85.142	84.642	85.642	1.6379								0	0	0	0.42693	1	35025	35025		0	0	1		+		24214	9415	12033	12088	27957	27957					-0.2568400873859673
PCCLYSAL	8	Unmodified	_PCCLYSAL_					0	0	0			REV__sp|P16846|UL23_HCMVATegumentproteinUL23OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL23PE=1SV=2	REV__sp|P16846|UL23_HCMVATegumentproteinUL23OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL23PE=1SV=2	MSMS	GG20161007_CRH_Patient100_W632_02	4	435.1994506716728	2	435.198425	868.382296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.49	1	105.65	105.15	106.15	0.16679								0	0	0	1.0178	1	44881	44881		0.79363	0	1		+		24215	14642	12034	12089	27958	27958					-0.05715966554782881
PCCSCCGA	8	Unmodified	_PCCSCCGA_					0	0	0			REV__ENST00000566451.1_1_16:56624711-56624858:+|nuORF	REV__ENST00000566451.1_1_16:56624711-56624858:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	372.1017333865166	2	372.102613	742.190672	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0808	1	7.0808	6.5808	7.5808	0								0	0	0	1.0178	1	2911	2911		0	0	1		+		24216	13941	12035	12090	27959	27959					-0.19073533849064006
PCCWYRWWCCR	11	Unmodified	_PCCWYRWWCCR_					0	0	0			REV__ENST00000187830.2_1_19:45147391-45165075:+|nuORF	REV__ENST00000187830.2_1_19:45147391-45165075:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	781.3062011599541	2	781.309054	1560.60356	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.466	1	11.135	10.635	11.635	0.66934								0	0	0	0.63775	1	4353	4353		0.30703	0	1		+		24217	12050	12036	12091	27960	27960					-0.1543217312159868
PCFIHECVPV	10	Unmodified	_PCFIHECVPV_					0	0	0			REV__nc|ENSG00000203710|P17927|CR1	REV__nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	572.2711669802666	2	572.269912	1142.52527	1.5309	0.00087608	3.101	0.0017746	4.6319	0.0026507	572.2716039257141	72.892	1.2224	72.892	72.269	73.491	0					74	38	3	0	0	0	0.77604	1	30418	30418		14.838	0	1	5305000	+		24218	11761	12037	12092	27961	27961					-0.0402895916356556
PCGEAPCP	8	Unmodified	_PCGEAPCP_					0	0	0			REV__nc|ENSG00000266200|P54317|PNLIPRP2	REV__nc|ENSG00000266200|P54317|PNLIPRP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	387.1524536013603	2	387.151474	772.288396	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.192	1	84.38	83.88	84.88	1.1879								0	0	0	1.0178	1	34920	34920		0.79363	0	1		+		24219	14559	12038	12093	27962	27962					-0.10685685657063004
PCGGFMPV	8	Unmodified	_PCGGFMPV_					0	0	0		ENSG00000188037|ENST00000343257|CLCN1	ENSG00000188037|ENST00000343257|CLCN1	ENSG00000188037|ENST00000343257|CLCN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	404.1799499392509	2	404.180035	806.345517	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.692	1	95.692	95.192	96.192	0								0	0	0	1.0178	1	39998	39998		0.79363	0	1				24220	4846	12039	12094	27963	27963					-0.06540218380678198
PCGGKGKG	8	Unmodified	_PCGGKGKG_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	352.3389465212822	2	352.181423	702.348294	-1.6644	-0.00058617	0.59915	0.00021101	-1.0653	-0.00037516	352.18258799290044	108.08	0.11784	108.08	107.99	108.11	0					11	5	3	0	0	0	2.3239	1	46458	46458		0	0	1	18931000	+		24221	11666	12040	12095	27964	27964					-0.014786269314981837
PCHELEDR	8	Unmodified	_PCHELEDR_					0	0	0			REV__ENST00000378536.4_1_1:2238773-2238983:+|nuORF	REV__ENST00000378536.4_1_1:2238773-2238983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.7237121462822	2	499.721641	997.428729	1.465	0.00073208	2.7559	0.0013772	4.2209	0.0021093	499.72250724160983	38.178	0.33221	38.178	37.994	38.326	0					22	12	2	0	0	0	0.7006	2	15984	15984;16028		30.225	6.2042	1	2432800	+		24222	12740	12041	12096	27965;27966	27965					-0.07008810399122467
PCHRLQQL	8	Unmodified	_PCHRLQQL_					0	0	0			REV__ENST00000161863.8_1_5:112902959-112903420:+|nuORF	REV__ENST00000161863.8_1_5:112902959-112903420:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	497.2592651247978	2	497.766186	993.517819	2.7474	0.0013675	-0.14624	-7.2791E-05	2.6011	0.0012948	497.76600001754633	81.898	0.30586	82.178	81.999	82.305	0.2802					11	9	2	0	0	0	2.3239	1	34197	34197		6.3541	0	1	899460	+		24223	12045	12042	12097	27967	27967					0.02080069351052316
PCKWNYLYYQL	11	Unmodified	_PCKWNYLYYQL_					0	0	0			REV__ENST00000591931.1_1_17:43182145-43183004:+|nuORF	REV__ENST00000591931.1_1_17:43182145-43183004:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	497.2636291384697	3	497.576079	1489.70641	0.48615	0.0002419	0.60305	0.00030007	1.0892	0.00054196	497.91094517948	24.176	0.24442	25.86	25.722	25.967	1.6845					16	7	3	0	0	0	0.14606	1	10050	10050		2.8433	0	1	1303700	+		24224	9982	12043	12098	27968	27968					-0.018857425859778232
PCLHASHH	8	Unmodified	_PCLHASHH_					0	0	0			REV__ENST00000598839.1_1_19:50063263-50063359:-|nuORF	REV__ENST00000598839.1_1_19:50063263-50063359:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412841677666	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5722	1	7.1934	6.6934	7.6934	0.62127								0	0	0	1.0178	1	2716	2716		0.45834	0	1		+		24225	14111	12044	12099	27969	27969					-0.05173034779943464
PCLLHICC	8	Unmodified	_PCLLHICC_					0	0	0		ENST00000551692.5_1_14:105834472-105850026:+|nuORF	ENST00000551692.5_1_14:105834472-105850026:+|nuORF	ENST00000551692.5_1_14:105834472-105850026:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417724490166	3	301.141272	900.401986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8705	1	2.5238	2.0238	3.0238	0.65331								0	0	0	1.0178	1	767	767		0.45834	0	1				24226	7269	12045	12100	27970	27970					-0.05219913815653854
PCLLIWVP	8	Unmodified	_PCLLIWVP_					0	0	0			REV__ENST00000542541.6_1_19:19050705-19050816:-|nuORF	REV__ENST00000542541.6_1_19:19050705-19050816:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1806518435478	3	314.182342	939.525196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.271	1	16.271	15.771	16.771	0								0	0	0	1.0178	1	6756	6756		0.45834	0	1		+		24227	13787	12046	12101	27971	27971					0.05301408898776572
PCPAPKGRK	9	Unmodified	_PCPAPKGRK_					0	0	0		ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7755004763603	2	477.271104	952.527655	4.623	0.0022064	0.36324	0.00017337	4.9862	0.0023798	477.2712953853679	89.434	0.5607	90.839	90.583	91.144	1.4045					41	17	3	0	0	0	0.83213	1	37695	37695		2.0598	0.21551	1	3208600			24228	6473	12047	12102	27972	27972					0.04949257356452108
PCPAPKGRK	9	Unmodified	_PCPAPKGRK_					0	0	0		ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	ENST00000427177.5_1_17:75495131-75495422:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	477.271104	952.527655	4.623	0.0022064	0.36324	0.00017337	4.9862	0.0023798	477.2712953853679	89.434	0.5607	90.839	90.583	91.144	1.4045	-0.09296	-0.00037966	NaN	2.0598	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3208600			24229	6473	12047	12102							0.04949257356452108
PCPKGKPR	8	Unmodified	_PCPKGKPR_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.7514526247978	2	441.752547	881.490542	1.7624	0.00077853	-3.9515	-0.0017456	-2.1892	-0.00096707	441.7506086089048	69.728	0.6557	70.05	69.847	70.503	0.32224					28	20	2	0	0	0	0.89008	1	29194	29194		2.5775	0	1	542130	+		24230	14577	12048	12103	27973	27973					0.04505585810670709
PCPPECRYDWC	11	Unmodified	_PCPPECRYDWC_					0	0	0			REV__AluSx3_dup13283|chr7:102550522-102550823:-|1.2518865361059783|0.3469297599780967|1.85|428.0|17|3|anti-sense	REV__AluSx3_dup13283|chr7:102550522-102550823:-|1.2518865361059783|0.3469297599780967|1.85|428.0|17|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8432494997978	3	456.843843	1367.5097	0.52396	0.00023937	-2.3924	-0.0010929	-1.8684	-0.00085357	456.8429189418258	0.97899	1.921	0.97899	-0.00030207	1.9207	0					192	92	3	0	0	0	1.0357	1	373	373		1.4551	0.24029	1	2148100	+		24231	8115	12049	12104	27974	27974					-0.15935613742863097
PCPRCHVP	8	Unmodified	_PCPRCHVP_					0	0	0		nc|ENSG00000185345|O60260-4|PRKN;nc|ENSG00000185345|O60260-6|PRKN;nc|ENSG00000185345|O60260-7|PRKN;nc|ENSG00000185345|O60260-8|PRKN;nc|ENSG00000185345|O60260-2|PRKN;ENSG00000185345|ENST00000366898|PRKN	nc|ENSG00000185345|O60260-4|PRKN	nc|ENSG00000185345|O60260-4|PRKN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.7180358767509	2	454.715107	907.415662	1.7946	0.00081604	3.4427	0.0015654	5.2373	0.0023815	454.71641018677013	73.507	0.54807	73.507	73.216	73.764	0					48	17	3	0	0	0	0.89051	1	30663	30663		2.3027	0	1	30552000			24232	4743	12050	12105	27975	27975					-0.04174919992215109
PCPRCHVP	8	Unmodified	_PCPRCHVP_					0	0	0		nc|ENSG00000185345|O60260-4|PRKN;nc|ENSG00000185345|O60260-6|PRKN;nc|ENSG00000185345|O60260-7|PRKN;nc|ENSG00000185345|O60260-8|PRKN;nc|ENSG00000185345|O60260-2|PRKN;ENSG00000185345|ENST00000366898|PRKN	nc|ENSG00000185345|O60260-4|PRKN	nc|ENSG00000185345|O60260-4|PRKN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.7183410525322	2	454.715107	907.415662	2.8043	0.0012752	2.9767	0.0013535	5.781	0.0026287	454.716141445759	73.248	0.54039	73.573	73.308	73.849	0.32494					45	17	3	0	0	0	0.89051	1	30585	30585		2.3027	0	1	23866000			24233	4743	12050	12105	27976	27976					-0.04174919992215109
PCWLCCCCCW	10	Unmodified	_PCWLCCCCCW_					0	0	0		CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	610.1867553591728	2	610.187839	1218.36113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.167	1	18.065	17.565	18.565	0.89794								0	0	0	0.66237	1	7145	7145		0.45834	0.45834	1				24234	317	12051	12106	27977	27977					-0.23932082513465502
PDAGDGGA	8	Unmodified	_PDAGDGGA_					0	0	0			REV__ENSG00000100320|ENST00000695854|RBFOX2	REV__ENSG00000100320|ENST00000695854|RBFOX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.2685424685478	1	659.26311	658.255833	3.6468	0.0024042	3.5384	0.0023328	7.1852	0.0047369	659.2662399720389	96.777	0.26401	97.062	96.954	97.218	0.28442					24	8	4	0	0	0	0.89178	1	40711	40711		0.69038	0	1	53859000	+		24235	8982	12052	12107	27978	27978					-0.08696433464024267
PDAKKRGK	8	Unmodified	_PDAKKRGK_					0	0	0		nc|ENSG00000099875|Q9HBH9-2|MKNK2;ENSG00000099875|ENST00000250896|MKNK2	nc|ENSG00000099875|Q9HBH9-2|MKNK2	nc|ENSG00000099875|Q9HBH9-2|MKNK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2760192751884	2	450.274701	898.534849	2.9752	0.0013396	0.7141	0.00032154	3.6892	0.0016612	450.27495817116215	75.262	1.7473	76.568	76.09	77.837	1.3063					108	56	5	0	0	0	0.89178	1	31539	31539		0.69038	0	1	99267000			24236	1220	12053	12108	27979	27979					0.08152313228526964
PDARLHVPPH	10	Unmodified	_PDARLHVPPH_					0	0	0			REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.8093139529228	2	569.809439	1137.60433	0.85635	0.00048796	-0.4398	-0.0002506	0.41655	0.00023735	569.8085053815972	27.185	0.34204	27.447	27.297	27.639	0.26173					25	10	3	0	0	0	0.89803	1	11371	11371		1.6526	0	1	930910	+		24237	13582	12054	12109	27980	27980					0.041027721772934456
PDARLHVPPH	10	Unmodified	_PDARLHVPPH_					0	0	0			REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	569.809439	1137.60433	0.85635	0.00048796	-0.4398	-0.0002506	0.41655	0.00023735	569.8085053815972	27.185	0.34204	27.447	27.297	27.639	0.26173	0.057294	0.0017767	NaN	1.6526	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930910	+		24238	13582	12054	12109							0.041027721772934456
PDARLHVPPH	10	Unmodified	_PDARLHVPPH_					0	0	0			REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	REV__ENST00000512760.5_1_4:79841695-79860421:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	569.809439	1137.60433	1.2854	0.00073241	-2.5304	-0.0014419	-1.245	-0.00070944	569.8079435789375	26.073	0.37622	27.332	27.172	27.549	1.2594	-0.057294	-0.00060581	NaN	1.6526	30	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1204400	+		24239	13582	12054	12109							0.041027721772934456
PDCRFLTI	8	Carbamidomethyl (C)	_PDC(Carbamidomethyl (C))RFLTI_	PDC(1)RFLTI		PDC(51)RFLTI		0	1	0		ENSG00000261857|ENST00000263369|MIA	ENSG00000261857|ENST00000263369|MIA	ENSG00000261857|ENST00000263369|MIA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2646057009697	2	511.260402	1020.50625	2.82	0.0014418	1.9329	0.0009882	4.7529	0.00243	511.2634648382173	65.651	0.42986	67.05	66.817	67.247	1.3989					22	13	2	0	0	0	0.45419	1	27536	27536		50.855	6.9967	1	21972000			24240	5424	12055	12110	27981	27981	8				-0.0031817246292575874
PDDEVLMLQI	10	Unmodified	_PDDEVLMLQI_					0	0	0			REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	586.7982665896416	2	586.797014	1171.57948	2.4948	0.0014639	-0.7042	-0.00041322	1.7906	0.0010507	586.7965955766559	88.243	0.33894	88.478	88.322	88.661	0.2347					21	10	3	0	0	0	0.87699	1	36989	36989		3.9444	0	1	1495300	+		24241	15132	12056	12111	27982	27982					0.0005491146903295885
PDDEVLMLQI	10	Unmodified	_PDDEVLMLQI_					0	0	0			REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	586.797014	1171.57948	2.609	0.0015309	-1.366	-0.00080154	1.243	0.0007294	586.7960614292958	88.409	0.36328	88.409	88.18	88.543	0	-0.11147	-0.00066249	NaN	3.9444	22	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2423300	+		24242	15132	12056	12111							0.0005491146903295885
PDDEVLMLQI	10	Unmodified	_PDDEVLMLQI_					0	0	0			REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	REV__tr|A0A553SQK6|A0A553SQK6_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_07830PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	586.797014	1171.57948	4.648	0.0027274	0.67446	0.00039577	5.3225	0.0031232	586.7968772515031	87.583	0.33811	88.675	88.428	88.766	1.0918	0.15432	0.0017321	NaN	3.9444	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	530540	+		24243	15132	12056	12111							0.0005491146903295885
PDDMSCDYDNM	11	Unmodified	_PDDMSCDYDNM_					0	0	0		ENSG00000204381|ENST00000375614|LAYN;nc|ENSG00000204381|Q6UX15|LAYN;ENST00000525126.5_2_11:111428322-111431180:+|nuORF;nc|ENSG00000204381|Q6UX15-3|LAYN	ENSG00000204381|ENST00000375614|LAYN	ENSG00000204381|ENST00000375614|LAYN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	327.0087463259697	4	327.107161	1304.39954	1.087	0.00035558	0.75003	0.00024534	1.8371	0.00060092	327.35852131212823	49.754	0.15655	51.731	51.601	51.758	1.9772					5	4	2	0	0	0	0.14606	1	20816	20816		0	0	1	186260			24244	5138	12057	12112	27983	27983					-0.24048503592575798
PDEFVQLII	9	Unmodified	_PDEFVQLII_					0	0	0		tr|A0A553SS59|A0A553SS59_NIACIImidazolonepropionaseOS=NialliacirculansOX=1397GN=hutIPE=3SV=1	tr|A0A553SS59|A0A553SS59_NIACIImidazolonepropionaseOS=NialliacirculansOX=1397GN=hutIPE=3SV=1	tr|A0A553SS59|A0A553SS59_NIACIImidazolonepropionaseOS=NialliacirculansOX=1397GN=hutIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3001586794853	2	537.297507	1072.58046	4.8372	0.002599	-0.45079	-0.00024221	4.3864	0.0023568	537.2971886319095	88.769	0.38483	90.215	90.017	90.402	1.4467					23	11	3	0	0	0	0.20671	1	37394	37394		32.305	6.9062	1	1015300			24245	16595	12058	12113	27984	27984					0.047074939002413885
PDELVVVDV	9	Unmodified	_PDELVVVDV_					0	0	0			REV__ENSG00000002726|ENST00000360937|AOC1	REV__ENSG00000002726|ENST00000360937|AOC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7681762576103	2	492.76604	983.517527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.501	1	63.501	63.001	64.001	0								0	0	0	0.41514	1	26473	26473		7.2892	0	1		+		24246	8481	12059	12114	27985	27985					0.02510928112201327
PDGAGGGA	8	Unmodified	_PDGAGGGA_					0	0	0			REV__ENSG00000118508|ENST00000367495|RAB32	REV__ENSG00000118508|ENST00000367495|RAB32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.2582275271416	1	601.257631	600.250354	3.1767	0.00191	-0.7678	-0.00046165	2.4089	0.0014484	601.2567405557669	119.67	1.6728	119.91	118.56	120.24	0.243					103	51	3	0	0	0	0.89178	1	51708	51708		0.69038	0	1	1635600	+		24247	9230	12060	12115	27986	27986					-0.0657611225585697
PDGGDGGN	8	Unmodified	_PDGGDGGN_					0	0	0		ENSG00000101181|ENST00000370823|MTG2;ENST00000466099.1_1_20:60768659-60775121:+|nuORF;MTG2|p.K222Vfs*46|1|0.1|ENSG00000101181|chr20:62198827-62198828|-/TGTTAGAGCAGCTTGCCTGTCTC|frameshift_variant	ENSG00000101181|ENST00000370823|MTG2	ENSG00000101181|ENST00000370823|MTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	344.6301757693291	2	344.630275	687.245997	-0.66034	-0.00022757	0.41773	0.00014396	-0.24261	-8.3611E-05	344.6302336632423	88.684	0.50385	88.684	88.484	88.988	0					27	15	2	0	0	0	0.89198	2	37071	37071;37123		0	0	1	1122800			24248	1326	12061	12116	27987;27988	27987					-0.11013621469408008
PDGGDGGN	8	Unmodified	_PDGGDGGN_					0	0	0		ENSG00000101181|ENST00000370823|MTG2;ENST00000466099.1_1_20:60768659-60775121:+|nuORF;MTG2|p.K222Vfs*46|1|0.1|ENSG00000101181|chr20:62198827-62198828|-/TGTTAGAGCAGCTTGCCTGTCTC|frameshift_variant	ENSG00000101181|ENST00000370823|MTG2	ENSG00000101181|ENST00000370823|MTG2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	344.630275	687.245997	3.7065	0.0012774	-2.0597	-0.00070984	1.6468	0.00056754	344.6295368465827	87.795	0.38021	88.886	88.704	89.084	1.0918	0.12094	-0.00062233	NaN	0	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	479940			24249	1326	12061	12116							-0.11013621469408008
PDHPIMETL	9	Unmodified	_PDHPIMETL_					0	0	0		nc|ENSG00000183199|Q58FF7|HSP90AB3P;ENST00000505987.1_1_4:88814417-88815164:+|nuORF	nc|ENSG00000183199|Q58FF7|HSP90AB3P	nc|ENSG00000183199|Q58FF7|HSP90AB3P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7590209841728	2	526.757692	1051.50083	2.1552	0.0011353	0.26797	0.00014115	2.4232	0.0012764	526.7582094775263	68.344	0.56818	70.214	69.858	70.426	1.87					52	17	4	0	0	0	0.59203	1	28607	28607		11.64	0	1	5949800			24250	7944	12062	12117	27989	27989					-0.0228589604539593
PDIRNLLGIL	10	Unmodified	_PDIRNLLGIL_					0	0	0			REV__tr|A0A7D7A1A2|A0A7D7A1A2_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23875PE=3SV=1	REV__tr|A0A7D7A1A2|A0A7D7A1A2_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23875PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.3442260622978	2	562.345323	1122.67609	1.2783	0.00071885	-2.6286	-0.0014782	-1.3503	-0.00075932	562.3438163433274	71.225	0.89718	73.049	72.547	73.445	1.824					52	28	3	0	0	0	0.846	1	29933	29933		7.2892	0.56607	1	5197600	+		24251	15821	12063	12118	27990	27990					0.11966266811123205
PDKGLLKKK	9	Unmodified	_PDKGLLKKK_					0	0	0		L1M1_dup621|chr1:224985612-224987088:+|1.1406864670825911|0.0275683224481481|5.37|427.0|10|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.1406864670825911|0.0275683224481481|5.37|427.0|10|1|sense	L1M1_dup621|chr1:224985612-224987088:+|1.1406864670825911|0.0275683224481481|5.37|427.0|10|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.8400146365166	2	513.837134	1025.65972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.9	1	12.9	12.4	13.4	0								0	0	0	0.42693	1	5342	5342		7.9102	3.5809	1				24252	7675	12064	12119	27991	27991					0.14791185645026417
PDKMKKSK	8	Unmodified	_PDKMKKSK_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;UNC45A-IQGAP1|2|fusion;UNC45A-IQGAP1|1|fusion;ENST00000561132.5_1_15:91029339-91034840:+|nuORF	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2805358767509	2	481.278595	960.542637	2.5154	0.0012106	2.0525	0.0009878	4.5679	0.0021984	481.27939340011085	79.115	0.28035	79.415	79.247	79.527	0.30047					24	8	3	0	0	0	0.89051	1	33073	33073		2.3027	0	1	8316000			24253	2927	12065	12120	27992	27992					0.060787044337757834
PDLFSLRVR	9	Unmodified	_PDLFSLRVR_					0	0	0		ENST00000467320.1_1_16:58550403-58550922:+|nuORF;nc|ENSG00000103037|Q8TBK2-2|SETD6;ENSG00000103037|ENST00000219315|SETD6	ENST00000467320.1_1_16:58550403-58550922:+|nuORF	ENST00000467320.1_1_16:58550403-58550922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2171813845634	3	368.217102	1101.62948	-0.79045	-0.00029106	0.04304	1.5848E-05	-0.74741	-0.00027521	368.21721853077713	36.22	0.5864	37.497	37.15	37.736	1.2762					56	34	3	0	0	0	0.62937	1	15189	15189		10.151	3.5202	1	2880900			24254	1412	12066	12121	27993	27993					0.08272826979850834
PDLGNRWQL	9	Unmodified	_PDLGNRWQL_					0	0	0			REV__ENST00000215555.6_1_19:8486899-8495545:+|nuORF	REV__ENST00000215555.6_1_19:8486899-8495545:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2204467654228	2	549.788173	1097.56179	3.8868	0.0021369	-1.2799	-0.00070367	2.6069	0.0014332	549.7886383286425	87.093	0.2142	88.184	88.09	88.304	1.0918					10	6	2	0	0	0	0.11684	1	36755	36755		7.9102	3.9658	1	284050	+		24255	12062	12067	12122	27994	27994					0.016913770490418756
PDLLLHDGL	9	Unmodified	_PDLLLHDGL_					0	0	0			REV__nc|ENSG00000124496|Q96PN7-2|TRERF1	REV__nc|ENSG00000124496|Q96PN7-2|TRERF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7756225466728	2	496.7742	991.533846	3.0114	0.001496	-0.32459	-0.00016125	2.6868	0.0013347	496.7743590716678	70.567	0.41672	71.921	71.744	72.161	1.3536					33	12	3	0	0	0	0.34572	1	29592	29592		23.148	6.2061	1	6049500	+		24256	9648	12068	12123	27995	27995					0.037740540689469526
PDLWELPEHRR	11	Unmodified	_PDLWELPEHRR_					0	0	0		ENST00000400246.5_1_22:32241096-32266721:+|nuORF	ENST00000400246.5_1_22:32241096-32266721:+|nuORF	ENST00000400246.5_1_22:32241096-32266721:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2529174685478	4	362.691476	1446.7368	-2.0263	-0.0007349	-2.3443	-0.00085024	-4.3705	-0.0015851	362.69016123901156	14.519	0.12195	14.519	14.412	14.534	0					6	3	2	0	0	0	0.14606	1	6012	6012		1.3296	0.11481	1	239220			24257	6341	12069	12124	27996	27996					0.03129752123390972
PDMFHCSGDFL	11	Unmodified	_PDMFHCSGDFL_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.7589599490166	2	634.757366	1267.50018	1.3408	0.00085106	1.2229	0.00077621	2.5636	0.0016273	634.7574679521352	84.294	0.27997	85.453	85.279	85.559	1.159					15	8	2	0	0	0	0.95983	1	35365	35365		6.2058	0.47393	1	1509800	+		24258	10448	12070	12125	27997	27997					-0.12287058756760416
PDMFHCSGDFL	11	Unmodified	_PDMFHCSGDFL_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	634.757366	1267.50018	1.3408	0.00085106	1.2229	0.00077621	2.5636	0.0016273	634.7574679521352	84.294	0.27997	85.453	85.279	85.559	1.159	0.0057429	-3.6984E-05	NaN	6.2058	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1509800	+		24259	10448	12070	12125							-0.12287058756760416
PDMFHCSGDFL	11	Unmodified	_PDMFHCSGDFL_					0	0	0			REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	REV__ENST00000470300.5_1_1:247027247-247061635:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	634.757366	1267.50018	1.3751	0.00087286	1.4496	0.00092014	2.8247	0.001793	634.757594398182	83.804	0.2132	85.442	85.315	85.528	1.6379	-0.0057429	0.00025088	NaN	6.2058	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1517800	+		24260	10448	12070	12125							-0.12287058756760416
PDPPLLRPSAR	11	Unmodified	_PDPPLLRPSAR_					0	0	0			REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	REV__ENST00000561976.5_1_16:89777082-89777376:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	406.9024536013603	3	406.903295	1217.68806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.582	1	37.582	37.082	38.082	0								0	0	0	0.63774	1	15754	15754		3.5927	0	1		+		24261	13904	12071	12126	27998	27998					0.08791883554295055
PDPWRPGPR	9	Unmodified	_PDPWRPGPR_					0	0	0			REV__ENSG00000179271|ENST00000316939|GADD45GIP1	REV__ENSG00000179271|ENST00000316939|GADD45GIP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2852661013603	2	539.283057	1076.55156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.772	1	26.457	25.957	26.957	1.6845								0	0	0	0.42693	1	10351	10351		4.3292	1.0479	1		+		24262	11273	12072	12127	27999	27999					0.016348141144590045
PDQGSFDQFK	10	Unmodified	_PDQGSFDQFK_					0	0	0			REV__ENSG00000049247|ENST00000361696|UTS2	REV__ENSG00000049247|ENST00000361696|UTS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.7684814333916	2	584.767103	1167.51965	1.1223	0.00065631	0.40347	0.00023594	1.5258	0.00089225	584.7672709654855	24.878	0.64174	24.878	24.613	25.255	0					44	20	3	0	0	0	0.74985	2	10397	10346;10397		16.149	0	1	1990500	+		24263	8616	12073	12128	28000;28001	28001					-0.05740643150033975
PDQGSFDQFK	10	Unmodified	_PDQGSFDQFK_					0	0	0			REV__ENSG00000049247|ENST00000361696|UTS2	REV__ENSG00000049247|ENST00000361696|UTS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.7681152224541	2	584.767103	1167.51965	1.2582	0.00073578	-0.46676	-0.00027295	0.79148	0.00046283	584.7665490769737	23.494	0.3049	24.709	24.596	24.901	1.2145					15	9	2	0	0	0	0.80702	1	9855	9855		11.495	0	1	315930	+		24264	8616	12073	12128	28002	28002					-0.05740643150033975
PDRARDTQTD	10	Unmodified	_PDRARDTQTD_					0	0	0		ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	587.7766601443291	2	587.77599	1173.53743	0.94889	0.00055773	1.1139	0.00065475	2.0628	0.0012125	587.776668402452	28.843	0.82115	29.122	28.619	29.441	0.2793					75	26	4	0	0	0	0.76954	1	12046	12046		15.248	0	1	2981700			24265	6997	12074	12129	28003	28003					-0.04239927895173423
PDRARDTQTD	10	Unmodified	_PDRARDTQTD_					0	0	0		ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7769653201103	2	587.77599	1173.53743	1.1009	0.00064707	0.45292	0.00026622	1.5538	0.00091328	587.7765183052592	27.663	0.92168	28.942	28.444	29.366	1.2789					80	29	4	0	0	0	0.70123	1	11574	11574		18.373	2.224	1	7273400			24266	6997	12074	12129	28004	28004					-0.04239927895173423
PDRARDTQTD	10	Unmodified	_PDRARDTQTD_					0	0	0		ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	ENST00000504473.5_1_16:89753600-89759778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.7765380740166	2	587.77599	1173.53743	0.69292	0.00040728	0.8982	0.00052794	1.5911	0.00093522	587.7767737220024	27.255	0.94467	29.002	28.445	29.39	1.747					87	30	4	0	0	0	0.70123	1	11461	11461		18.373	2.224	1	7043400			24267	6997	12074	12129	28005	28005					-0.04239927895173423
PDRKGQSPK	9	Unmodified	_PDRKGQSPK_					0	0	0		nc|ENSG00000109458|Q13480-2|GAB1	nc|ENSG00000109458|Q13480-2|GAB1	nc|ENSG00000109458|Q13480-2|GAB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1013.892260730267	1	1012.55342	1011.54614	1.8151	0.0018379	2.8002	0.0028353	4.6153	0.0046732	1013.5602914342745	37.283	0.087692	37.587	37.512	37.599	0.30497					5	3	2	0	0	0	0.70108	1	15652	15652		7.2892	2.0586	1	1031000			24268	7851	12075	12130	28006	28006					0.040830905320035527
PDRLLLLFL	9	Unmodified	_PDRLLLLFL_					0	0	0			REV__ENST00000395076.8_1_14:60716117-60716189:+|nuORF	REV__ENST00000395076.8_1_14:60716117-60716189:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.7407104372978	2	550.347335	1098.68012	3.9449	0.0021711	0.3778	0.00020792	4.3227	0.002379	550.3483881507769	92.162	0.44938	93.098	92.893	93.342	0.93624					30	13	3	0	0	0	0.11027	1	38862	38862		12.241	2.8932	1	969210	+		24269	12835	12076	12131	28007	28007					0.1347235630482828
PDSHVYLLL	9	Unmodified	_PDSHVYLLL_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.7573119997978	2	528.78985	1055.56515	2.5259	0.0013357	1.1168	0.00059055	3.6427	0.0019262	528.7902845785546	77.251	0.34959	78.532	78.313	78.663	1.2809					13	10	2	0	0	0	0.11463	1	32353	32353		12.532	1.7076	1	820850	+		24270	11233	12077	12132	28008	28008					0.03958627103043
PDSHVYLLL	9	Unmodified	_PDSHVYLLL_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	528.78985	1055.56515	2.3645	0.0012503	-0.35582	-0.00018816	2.0087	0.0010622	528.7896466437037	76.707	0.34943	78.474	78.321	78.671	1.7672	-0.029051	-0.00096977	NaN	7.9102	26	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2262000	+		24271	11233	12077	12132							0.03958627103043
PDTTITVPGI	10	Unmodified	_PDTTITVPGI_					0	0	0			REV__ENSG00000143341|ENST00000271588|HMCN1	REV__ENSG00000143341|ENST00000271588|HMCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.2804138064384	2	507.279315	1012.54408	2.6916	0.0013654	0.74906	0.00037998	3.4407	0.0017454	507.27962725612736	84.957	0.51184	84.957	84.749	85.261	0					33	15	3	0	0	0	0.89803	1	35383	35383		1.6526	0.17072	1	1787900	+		24272	10203	12078	12133	28009	28009					0.03830617003529824
PDVGLLLVL	9	Unmodified	_PDVGLLLVL_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.8018981814384	2	469.799686	937.584819	2.3497	0.0011039	1.012	0.00047546	3.3617	0.0015793	469.8000321326606	83.301	0.31643	84.489	84.356	84.673	1.1879					16	9	2	0	0	0	0.49082	1	34967	34967		15.847	3.3156	1	944610	+		24273	11737	12079	12134	28010	28010					0.11353003113799787
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.4454833865166	4	389.445643	1553.75347	-1.3349	-0.00051989	0.1098	4.2759E-05	-1.2252	-0.00047713	389.44597373585594	12.719	0.43028	12.719	12.53	12.96	0					45	13	6	0	0	0	0.96769	2	5249	5249;5298		2.6312	1.5215	1	12671000	+		24274	12539	12080	12135	28011;28012	28011					-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.4453002810478	4	389.445643	1553.75347	0.17999	7.0095E-05	-1.7033	-0.00066335	-1.5233	-0.00059325	389.44513326510787	12.605	0.28038	12.694	12.522	12.803	0.089381					22	8	4	0	0	0	1.0131	1	5237	5237		1.2148	0.76031	1	5307500	+		24275	12539	12080	12135	28013	28013					-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.9245483279228	3	518.925099	1553.75347	-0.047465	-2.4631E-05	-1.217	-0.00063154	-1.2645	-0.00065617	518.9245336382028	12.238	0.28475	12.932	12.789	13.074	0.69396					27	8	5	0	0	0	1.0131	1	5088	5088		1.2148	0.76031	1	8430100	+		24276	12539	12080	12135	28014	28014					-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1394531130791	3	518.925099	1553.75347	-0.047465	-2.4631E-05	-1.217	-0.00063154	-1.2645	-0.00065617	518.9245336382028	12.238	0.28475	12.932	12.789	13.074	0.69396					27	8	5	0	0	0	0.14606	1	5054	5054		0.45452	0.31463	1	8430100	+		24277	12539	12080	12135	28015	28015					-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	389.445643	1553.75347	-1.3349	-0.00051989	0.1098	4.2759E-05	-1.2252	-0.00047713	389.44597373585594	12.719	0.43028	12.719	12.53	12.96	0	-0.083102	0.0019702	NaN	2.6312	45	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12671000	+		24278	12539	12080	12135							-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	389.445643	1553.75347	0.17999	7.0095E-05	-1.7033	-0.00066335	-1.5233	-0.00059325	389.44513326510787	12.605	0.28038	12.694	12.522	12.803	0.089381	-0.10745	-0.00085422	NaN	2.6312	22	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5307500	+		24279	12539	12080	12135							-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	389.445643	1553.75347	-0.85748	-0.00033394	-1.0971	-0.00042727	-1.9546	-0.00076121	389.44537853442284	12.24	0.22244	12.934	12.789	13.012	0.69396	0.13221	9.0107E-05	NaN	2.6312	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2268000	+		24280	12539	12080	12135							-0.001260254716498821
PDWHSWCRRRR	11	Unmodified	_PDWHSWCRRRR_					0	0	0			REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	REV__ENST00000354586.4_1_14:53196900-53197056:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	389.445643	1553.75347	-0.11484	-4.4723E-05	-1.8669	-0.00072705	-1.9817	-0.00077177	389.6955709000527	12.073	0.18846	12.86	12.752	12.941	0.78751	0.05834	-0.001109	NaN	2.6312	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3846900	+		24281	12539	12080	12135							-0.001260254716498821
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2929565310478	3	517.291887	1548.85383	1.4607	0.00075563	-1.3805	-0.0007141	0.080273	4.1524E-05	517.6252793759891	113.5	7.1668	113.5	112.85	120.01	0					631	222	3	0	0	0	1.0391	1	51452	51452		0.40827	0.041592	1	6251800	+		24282	12275	12081	12136	28016	28016					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6270019412041	3	517.291887	1548.85383	2.5539	0.0013211	-2.9106	-0.0015056	-0.35672	-0.00018453	517.6243596818683	57.947	1.949	58.27	57.327	59.276	0.32298					160	67	3	0	0	0	1.0191	1	24138	24138		2.6312	0	1	2190200	+		24283	12275	12081	12136	28017	28017					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6268798708916	3	517.291887	1548.85383	2.0669	0.0010692	-1.5146	-0.0007835	0.55231	0.00028571	517.6249066093384	63.856	2.1347	64.185	63.223	65.358	0.32899					171	67	3	0	0	0	1.0365	1	26810	26810		1.2148	0	1	2851500	+		24284	12275	12081	12136	28018	28018					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6262695193291	3	517.291887	1548.85383	2.175	0.0011251	-1.4632	-0.00075692	0.71172	0.00036817	517.6250017664112	77.403	1.3225	77.72	77.04	78.362	0.31653					54	41	2	0	0	0	1.0365	1	32249	32249		1.2148	0.76031	1	2585000	+		24285	12275	12081	12136	28019	28019					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6271240115166	3	517.291887	1548.85383	1.9659	0.001017	-1.1762	-0.00060844	0.78974	0.00040853	517.625098036245	79.259	3.2574	79.559	78.029	81.286	0.30046					209	103	3	0	0	0	1.0365	1	33523	33523		1.2148	0	1	2480200	+		24286	12275	12081	12136	28020	28020					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6262695193291	3	517.291887	1548.85383	2.4658	0.0012755	-1.9409	-0.001004	0.52495	0.00027155	517.2930720366364	50.53	1.1778	51.924	51.169	52.346	1.3938					80	37	3	0	0	0	1.0191	1	20933	20933		2.6312	1.4164	1	3806500	+		24287	12275	12081	12136	28021	28021					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6254760622978	3	517.291887	1548.85383	1.1848	0.00061288	-1.8359	-0.00094972	-0.65117	-0.00033685	517.2920179057138	52.469	1.7175	53.866	53.012	54.729	1.3966					114	57	3	0	0	0	1.0191	1	21826	21826		2.6312	0	1	3126000	+		24288	12275	12081	12136	28022	28022					0.10135954853672047
PDWPRRWRRPK	11	Unmodified	_PDWPRRWRRPK_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6270629763603	3	517.291887	1548.85383	3.3618	0.001739	-1.1584	-0.00059922	2.2034	0.0011398	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0365	1	51631	51631		1.2148	0.80657	1	11283000	+		24289	12275	12081	12136	28023	28023					0.10135954853672047
PDYCFSAD	8	Unmodified	_PDYCFSAD_					0	0	0			REV__ENSG00000187715|ENST00000405109|KBTBD12	REV__ENSG00000187715|ENST00000405109|KBTBD12	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1728698611259	2	459.170918	916.327284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.74	1	86.336	85.836	86.836	1.5962								0	0	0	1.0178	1	35543	35543		0.69038	0	1		+		24290	11545	12082	12137	28024	28024					-0.1342268182169164
PDYMFLFHLLR	11	Unmodified	_PDYMFLFHLLR_					0	0	0			REV__nc|ENSG00000185324|Q15131-4|CDK10	REV__nc|ENSG00000185324|Q15131-4|CDK10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	726.8801147341728	2	726.37884	1450.74313	2.1949	0.0015943	0.18434	0.0001339	2.3792	0.0017282	726.8799812423491	49.608	0.31078	49.608	49.413	49.723	0					15	9	2	0	0	0	1.0362	2	20680	20680;20731		1.3295	0	1	936160	+		24291	14507	12083	12138	28025;28026	28025					0.035785540305823815
PDYTFYYM	8	Unmodified	_PDYTFYYM_					0	0	0			REV__ENST00000462639.1_1_X:23803380-23803605:+|nuORF	REV__ENST00000462639.1_1_X:23803380-23803605:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	367.2695190310478	3	367.152888	1098.43683	1.6722	0.00061396	-2.5666	-0.00094234	-0.8944	-0.00032838	367.4860960698793	79.628	0.15625	80.879	80.769	80.925	1.2512					7	4	2	0	0	0	2.3239	1	33436	33436		0.45834	0.18932	1	332700	+		24292	9766	12084	12139	28027	28027					-0.10844676202373194
PEDEDEDD	8	Unmodified	_PEDEDEDD_					0	0	0		ENST00000435954.2_1_6:54350144-54350642:-|nuORF	ENST00000435954.2_1_6:54350144-54350642:-|nuORF	ENST00000435954.2_1_6:54350144-54350642:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	321.7729980349541	3	321.77357	962.29888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.346	1	63.346	62.846	63.846	0								0	0	0	1.0178	1	26409	26409		0	0	1				24293	6528	12085	12140	28028	28028					-0.18377752987930762
PEDPAPLW	8	Unmodified	_PEDPAPLW_					0	0	0		EMID1-CBY1|1|fusion;nc|ENSG00000186998|Q96A84-2|EMID1;nc|ENSG00000186998|Q96A84|EMID1;ENSG00000186998|ENST00000334018|EMID1	EMID1-CBY1|1|fusion	EMID1-CBY1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1474487185478	2	462.726718	923.438883	1.2753	0.0005901	1.2553	0.00058085	2.5305	0.0011709	462.727399038911	27.789	0.21801	29.068	28.935	29.153	1.2789					11	6	2	0	0	0	2.3239	1	11642	11642		2.5775	0	1	365520			24294	449	12086	12141	28029	28029					-0.025898794022282345
PEECDSDDR	9	Unmodified	_PEECDSDDR_					0	0	0			REV__ENST00000464307.5_1_11:64374670-64390737:-|nuORF	REV__ENST00000464307.5_1_11:64374670-64390737:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1921264529228	2	533.19311	1064.37167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.88	1	38.156	37.656	38.656	1.2762								0	0	0	0.42693	1	15477	15477		1.6526	0.96225	1		+		24295	9291	12087	12142	28030	28030					-0.15794322466172162
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1061584353447	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.217	1	2.3395	1.8395	2.8395	0.12256								0	0	0	0.42693	1	913	913		0	0	1		+		24296	9306	12088	12143	28031	28031					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1064941287041	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9833	1	3.1058	2.6058	3.6058	0.12256								0	0	0	0.42693	1	1231	1231		0	0	1		+		24297	9306	12088	12143	28032	28032					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1064330935478	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2552	1	5.3432	4.8432	5.8432	0.08803								0	0	0	0.42693	1	2171	2171		0	0	1		+		24298	9306	12088	12143	28033	28033					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1061279177666	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4348	1	5.5228	5.0228	6.0228	0.08803								0	0	0	0.42693	1	2245	2245		0	0	1		+		24299	9306	12088	12143	28034	28034					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065856814384	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6053	1	5.6878	5.1878	6.1878	0.082553								0	0	0	0.42693	1	2316	2316		0	0	1		+		24300	9306	12088	12143	28035	28035					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1067382693291	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1225	1	6.2024	5.7024	6.7024	0.079923								0	0	0	0.42693	1	2532	2532		0	0	1		+		24301	9306	12088	12143	28036	28036					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1059142947197	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9371	1	8.0134	7.5134	8.5134	0.07632								0	0	0	0.42693	1	3284	3284		0	0	1		+		24302	9306	12088	12143	28037	28037					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1061584353447	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0904	1	8.1667	7.6667	8.6667	0.07632								0	0	0	0.42693	1	3349	3349		0	0	1		+		24303	9306	12088	12143	28038	28038					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1070129275322	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1898	1	8.2661	7.7661	8.7661	0.07632								0	0	0	0.42693	1	3390	3390		0	0	1		+		24304	9306	12088	12143	28039	28039					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1067993044853	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2906	1	8.3669	7.8669	8.8669	0.07632								0	0	0	0.42693	1	3432	3432		0	0	1		+		24305	9306	12088	12143	28040	28040					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1062499880791	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4055	1	8.4819	7.9819	8.9819	0.07632								0	0	0	0.42693	1	3480	3480		0	0	1		+		24306	9306	12088	12143	28041	28041					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065246462822	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7817	1	8.858	8.358	9.358	0.07632								0	0	0	0.42693	1	3637	3637		0	0	1		+		24307	9306	12088	12143	28042	28042					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1060058474541	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.162	1	11.244	10.744	11.744	0.082325								0	0	0	0.42693	1	4631	4631		0	0	1		+		24308	9306	12088	12143	28043	28043					-0.20130910504667554
PEECTDCCT	9	Unmodified	_PEECTDCCT_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1057311892509	3	334.106733	999.298368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.352	1	11.434	10.934	11.934	0.082325								0	0	0	0.42693	1	4709	4709		0	0	1		+		24309	9306	12088	12143	28044	28044					-0.20130910504667554
PEELSVWIDP	10	Unmodified	_PEELSVWIDP_					0	0	0		nc|ENSG00000183864|Q14106-2|TOB2;ENSG00000183864|ENST00000327492|TOB2	nc|ENSG00000183864|Q14106-2|TOB2	nc|ENSG00000183864|Q14106-2|TOB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.7974731326103	2	592.795329	1183.5761	1.9439	0.0011523	2.3703	0.0014051	4.3142	0.0025574	592.7965260244093	64.734	0.37671	66.662	66.487	66.864	1.928					21	11	2	0	0	0	0.6819	1	27161	27161		19.257	7.0163	1	2479900			24310	4673	12089	12144	28045	28045					-0.008340153133531203
PEEVVALDL	9	Unmodified	_PEEVVALDL_					0	0	0			REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7671691775322	2	492.76604	983.517527	2.9167	0.0014373	-0.31773	-0.00015657	2.599	0.0012807	492.76568375957925	62.066	1.6737	63.484	62.896	64.57	1.4177					112	53	3	0	0	0	0.13873	3	25996	25996;26218;26284		39.957	3.9131	1	2276700	+		24311	14556	12090	12145	28046;28047;28048	28046					0.02510928112201327
PEEVVALDL	9	Unmodified	_PEEVVALDL_					0	0	0			REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	984.5245239138603	1	984.524804	983.517527	2.846	0.002802	1.1226	0.0011053	3.9686	0.0039072	984.5255972294884	61.557	0.87819	63.514	63.241	64.12	1.9571					41	27	2	0	0	0	0.51189	1	25762	25762		14.838	4.0143	1	880050	+		24312	14556	12090	12145	28049	28049					0.02510928112201327
PEEVVALDL	9	Unmodified	_PEEVVALDL_					0	0	0			REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7670471072197	2	492.76604	983.517527	2.7488	0.0013545	-0.58855	-0.00029002	2.1603	0.0010645	492.76573375386704	61.727	1.3927	63.684	63.089	64.482	1.9571					95	44	3	0	0	0	0.20671	1	25810	25810		32.305	2.0807	1	2028500	+		24313	14556	12090	12145	28050	28050					0.02510928112201327
PEFFTFGG	8	Unmodified	_PEFFTFGG_					0	0	0		ENSG00000153339|ENST00000283351|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	ENSG00000153339|ENST00000283351|TRAPPC8	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412536501884	3	301.1412	900.401769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1678	1	1.9162	1.4162	2.4162	0.7484								0	0	0	1.0178	1	483	483		0.45834	0	1				24314	3355	12091	12146	28051	28051					-0.05241550947994256
PEFGEECTCEF	11	Unmodified	_PEFGEECTCEF_					0	0	0			REV__ENSG00000166147|ENST00000316623|FBN1	REV__ENSG00000166147|ENST00000316623|FBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8283264040947	3	430.826623	1289.45804	3.1244	0.0013461	-0.061308	-2.6413E-05	3.0631	0.0013196	430.82692336522524	65.198	0.37665	66.597	66.38	66.757	1.3989					31	11	4	0	0	0	1.0156	1	27362	27362		2.8433	0	1	2476800	+		24315	10813	12092	12147	28052	28052					-0.17511078955840276
PEFNQENHK	9	Unmodified	_PEFNQENHK_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5119811892509	3	381.512355	1141.51524	-1.6183	-0.00061742	-1.9609	-0.00074809	-3.5792	-0.0013655	381.51217322987355	2.7082	2.1198	2.7082	1.4289	3.5486	0					189	92	4	0	0	0	0.35546	2	665	665;786		22.658	2.1942	1	2908400			24316	4488	12093	12148	28053;28054	28053					-0.04986107572926812
PEFNQENHK	9	Unmodified	_PEFNQENHK_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5132324099541	3	381.512355	1141.51524	-0.75121	-0.0002866	0.49376	0.00018837	-0.25745	-9.8222E-05	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.52273	2	13700	12828;13700		14.405	0.88672	1	2428000			24317	4488	12093	12148	28055;28056	28056					-0.04986107572926812
PEFNQENHK	9	Unmodified	_PEFNQENHK_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5096313357353	3	381.512355	1141.51524	0.53595	0.00020447	-3.1733	-0.0012106	-2.6373	-0.0010062	381.51140201789013	25.284	2.6906	26.543	25.442	28.133	1.2594					113	87	2	0	0	0	0.71759	1	10624	10624		6.6304	1.5829	1	1140900			24318	4488	12093	12148	28057	28057					-0.04986107572926812
PEFNQENHK	9	Unmodified	_PEFNQENHK_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5100585818291	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1977	1	5.819	5.319	6.319	0.62127								0	0	0	0.41189	1	2146	2146		7.609	1.4032	1				24319	4488	12093	12148	28058	28058					-0.04986107572926812
PEFNQENHK	9	Unmodified	_PEFNQENHK_					0	0	0		ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	ENSG00000178665|ENST00000429591|ZNF713	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5100585818291	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.009	1	24.66	24.16	25.16	1.6511								0	0	0	0.42184	1	9606	9606		6.6304	1.7334	1				24320	4488	12093	12148	28059	28059					-0.04986107572926812
PEFSAKKEGK	10	Unmodified	_PEFSAKKEGK_					0	0	0		ENSG00000150540|ENST00000280097|HNMT	ENSG00000150540|ENST00000280097|HNMT	ENSG00000150540|ENST00000280097|HNMT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.0995666384697	3	374.204751	1119.59242	-0.87416	-0.00032711	-2.0445	-0.00076507	-2.9187	-0.0010922	374.2036502429132	14.094	0.15308	14.864	14.762	14.915	0.76937					13	5	3	0	0	0	0.12549	1	5827	5827		3.5871	0	1	1958900			24321	3266	12094	12149	28060	28060					0.03741110643431966
PEFSAKKEGK	10	Unmodified	_PEFSAKKEGK_					0	0	0		ENSG00000150540|ENST00000280097|HNMT	ENSG00000150540|ENST00000280097|HNMT	ENSG00000150540|ENST00000280097|HNMT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	374.204751	1119.59242	-0.13227	-4.9498E-05	-1.8189	-0.00068065	-1.9512	-0.00073014	374.2037101708734	13.983	0.1794	14.81	14.704	14.884	0.82789	-0.026552	0.00014302	NaN	3.5871	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607680			24322	3266	12094	12149							0.03741110643431966
PEFSATLVL	9	Unmodified	_PEFSATLVL_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7740966677666	2	488.771126	975.527698	2.7816	0.0013596	-0.44455	-0.00021728	2.337	0.0011423	488.7723088327109	75.512	0.53833	77.294	77.103	77.641	1.7817					46	17	4	0	0	0	0.069258	1	31671	31671		60.39	0	1	3662600	+		24323	9469	12095	12150	28061	28061					0.038955358374209936
PEFSEASPQ	9	Unmodified	_PEFSEASPQ_					0	0	0		nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1;nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.1495239138603	3	331.150423	990.429441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.069	1	98.069	97.569	98.569	0								0	0	0	0.42693	1	41003	41003		1.1933	0	1				24324	2778	12096	12151	28062	28062					-0.06615692478419533
PEGIRPMTYLN	11	Unmodified	_PEGIRPMTYLN_					0	0	0			REV__nc|ENSG00000217128|Q8TF40-2|FNIP1	REV__nc|ENSG00000217128|Q8TF40-2|FNIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888122439384	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.616	1	2.2693	1.7693	2.7693	0.65331								0	0	0	0.63775	1	662	662		0.08335	0	1		+		24325	11870	12097	12152	28063	28063					0.010571113458354375
PEGKLVGSIVK	11	Unmodified	_PEGKLVGSIVK_					0	0	0			REV__ENST00000531785.1_1_11:76092857-76106035:+|nuORF	REV__ENST00000531785.1_1_11:76092857-76106035:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2353698611259	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.13	1	96.235	95.735	96.735	0.105								0	0	0	0.63775	1	40231	40231		1.3296	0.25818	1		+		24326	11271	12098	12153	28064	28064					0.11794847091300653
PEGSITLII	9	Unmodified	_PEGSITLII_					0	0	0		CON__Q3T052	CON__Q3T052	CON__Q3T052	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7801086306572	2	471.778951	941.543348	2.7464	0.0012957	-0.6283	-0.00029642	2.1181	0.00099927	471.7789393460079	76.828	0.56628	78.122	77.792	78.359	1.2938					29	17	2	0	0	0	0.09539	1	32288	32288		50.855	2.5092	1	2136900		+	24327	359	12099	12154	28065	28065					0.070238223544834
PEGSYQCYL	9	Unmodified	_PEGSYQCYL_					0	0	0		ENST00000204726.7_3_12:133349592-133349694:-|nuORF	ENST00000204726.7_3_12:133349592-133349694:-|nuORF	ENST00000204726.7_3_12:133349592-133349694:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7293578982353	2	530.226225	1058.4379	3.4569	0.0018329	-1.6985	-0.0009006	1.7584	0.00093235	530.7274850766331	95.887	0.12701	96.289	96.239	96.366	0.40208					5	3	2	0	0	0	0.70108	1	40350	40350		7.2892	0.56607	1	1092100			24328	5511	12100	12155	28066	28066					-0.0889846183345071
PEIGLFVVL	9	Unmodified	_PEIGLFVVL_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8011657595634	2	493.799686	985.584819	4.1755	0.0020619	-1.2796	-0.00063184	2.8959	0.00143	493.7994770211541	92.422	0.48997	93.358	93.082	93.572	0.93623					26	14	2	0	0	0	0.59203	1	38966	38966		11.64	0	1	1112700	+		24329	10302	12101	12156	28067	28067					0.09145003113803796
PEILLKLLI	9	Unmodified	_PEILLKLLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|158|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2433349490166	3	351.242366	1050.70527	0.33569	0.00011791	2.3995	0.00084281	2.7352	0.00096072	351.24325833524324	21.886	1.4635	22.109	21.872	23.336	0.223					130	48	6	0	0	0	0.85206	1	9102	9102		0.26902	0	1	59592000			24330	7731	12102	12157	28068	28068					0.18194411107424457
PEILLKLLI	9	Unmodified	_PEILLKLLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|158|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2427856326103	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.85252	1	7684	7684		0.20686	0	1	143590000			24331	7731	12102	12157	28069	28069					0.18194411107424457
PEILLKLLI	9	Unmodified	_PEILLKLLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|158|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2437316775322	3	351.242366	1050.70527	-0.17861	-6.2736E-05	1.9615	0.00068895	1.7829	0.00062622	351.2434098450176	16.233	0.9273	17.272	17.013	17.94	1.0392					119	32	6	0	0	0	0.85252	1	6754	6754		0.20686	0	1	381400000			24332	7731	12102	12157	28070	28070					0.18194411107424457
PEILLKLLI	9	Unmodified	_PEILLKLLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense;L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|158|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|123|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2436096072197	3	351.242366	1050.70527	-0.0090448	-3.1769E-06	2.3168	0.00081374	2.3077	0.00081057	351.2432799196589	20.291	1.6712	21.866	21.639	23.31	1.5748					150	55	6	0	0	0	0.85206	1	8466	8466		0.26902	0	1	95744000			24333	7731	12102	12157	28071	28071					0.18194411107424457
PEKELKRVS	9	Unmodified	_PEKELKRVS_					0	0	0		tr|A0A7D7A607|A0A7D7A607_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08460PE=3SV=1	tr|A0A7D7A607|A0A7D7A607_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08460PE=3SV=1	tr|A0A7D7A607|A0A7D7A607_9CLOTsirohemedecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08460PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2526733279228	3	362.548629	1084.62406	-0.16421	-5.9533E-05	-0.013258	-4.8068E-06	-0.17747	-6.434E-05	362.54851427665886	15.006	0.34202	15.903	15.68	16.022	0.89664					15	10	2	0	0	0	0.11938	1	6200	6200		1.1933	0	1	513080			24334	17302	12103	12158	28072	28072					0.08513103397376653
PEKNQLHGS	9	Unmodified	_PEKNQLHGS_					0	0	0		KRT84|p.G574Afs*72|1|0.13|ENSG00000161849|chr12:52378116-52378117|-/AG|frameshift_variant	KRT84|p.G574Afs*72|1|0.13|ENSG00000161849|chr12:52378116-52378117|-/AG|frameshift_variant	KRT84|p.G574Afs*72|1|0.13|ENSG00000161849|chr12:52378116-52378117|-/AG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2590820193291	2	505.256705	1008.49886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.572	1	40.408	39.908	40.908	1.8366								0	0	0	0.32813	1	16179	16179		15.847	8.558	1				24335	7671	12104	12159	28073	28073					-0.00505188738986817
PEKTLESGPLP	11	Unmodified	_PEKTLESGPLP_					0	0	0			REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3173095583916	2	584.316428	1166.6183	1.8893	0.0011039	-1.1838	-0.0006917	0.70548	0.00041222	584.3163306814344	54.818	0.33045	55.139	54.989	55.32	0.32088					23	11	3	0	0	0	0.91768	1	22932	22932		8.7454	0.58988	1	2859800	+		24336	10777	12105	12160	28074	28074					0.04165960095042465
PEKVLRDIIL	10	Unmodified	_PEKVLRDIIL_					0	0	0		tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	tr|A0A7D7A2H6|A0A7D7A2H6_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16950PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510864138603	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.619	1	80.354	79.854	80.854	1.735								0	0	0	0.6623	1	32973	32973		0.56317	0.10865	1				24337	17255	12106	12161	28075	28075					0.14403109016711824
PELALPTSPVE	11	Unmodified	_PELALPTSPVE_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.8124267458916	2	576.810979	1151.6074	1.7079	0.00098513	2.0131	0.0011612	3.721	0.0021463	576.811127817564	79.815	0.34738	80.115	79.942	80.289	0.30047					18	10	2	0	0	0	0.84637	1	33376	33376		13.042	2.2185	1	1087400	+		24338	11338	12107	12162	28076	28076					0.037665577207462775
PELALPTSPVE	11	Unmodified	_PELALPTSPVE_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	576.810979	1151.6074	1.7502	0.0010096	1.7937	0.0010346	3.544	0.0020442	576.8107848835986	80.241	0.31435	80.241	80.102	80.417	0	0.066156	0.0011064	NaN	13.042	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602470	+		24339	11338	12107	12162							0.037665577207462775
PELALPTSPVE	11	Unmodified	_PELALPTSPVE_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	576.810979	1151.6074	1.7079	0.00098513	2.0131	0.0011612	3.721	0.0021463	576.811127817564	79.815	0.34738	80.115	79.942	80.289	0.30047	-0.059519	0.0013595	NaN	13.042	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1087400	+		24340	11338	12107	12162							0.037665577207462775
PELALPTSPVE	11	Unmodified	_PELALPTSPVE_					0	0	0			REV__ENSG00000182095|ENST00000430969|TNRC18	REV__ENSG00000182095|ENST00000430969|TNRC18	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	576.810979	1151.6074	2.6983	0.0015564	-0.22506	-0.00012982	2.4732	0.0014266	576.8108069038676	78.902	0.34468	80.168	79.972	80.316	1.2668	-0.0066369	-0.0012225	NaN	13.042	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225800	+		24341	11338	12107	12162							0.037665577207462775
PELEGVEIV	9	Unmodified	_PELEGVEIV_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	984.5274536013603	1	984.524804	983.517527	2.846	0.002802	1.1226	0.0011053	3.9686	0.0039072	984.5255972294884	61.557	0.87819	63.514	63.241	64.12	1.9571					41	27	2	0	0	0	0.37357	1	25811	25811		21.747	0	1	880050			24342	1422	12108	12163	28077	28077					0.02510928112212696
PELEGVEIV	9	Unmodified	_PELEGVEIV_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000574894.1_1_16:16367711-16371421:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	984.524804	983.517527	3.788	0.0037294	0.15566	0.00015325	3.9437	0.0038827	984.5243773908728	62.095	1.0223	63.512	63.113	64.135	1.4177	-0.00085332	-0.00033985	NaN	21.747	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1040900			24343	1422	12108	12163							0.02510928112212696
PELEPWSLL	9	Unmodified	_PELEPWSLL_					0	0	0			REV__ENST00000457542.6_2_15:42118039-42118483:+|nuORF	REV__ENST00000457542.6_2_15:42118039-42118483:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2909423708916	2	542.289682	1082.56481	2.405	0.0013042	1.0498	0.00056931	3.4549	0.0018735	542.2905589630337	84.38	0.32816	85.976	85.829	86.158	1.5962					25	10	3	0	0	0	0.5697	1	35441	35441		12.532	2.3482	1	4112600	+		24344	13172	12109	12164	28078	28078					0.026832073831883463
PELLCTPG	8	Unmodified	_PELLCTPG_					0	0	0			REV__ENST00000461547.5_1_20:56191111-56191654:-|nuORF	REV__ENST00000461547.5_1_20:56191111-56191654:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	829.4164916872978	1	829.412417	828.40514	2.8636	0.0023751	2.0776	0.0017232	4.9412	0.0040983	829.4142707294753	104.77	0.094788	104.93	104.86	104.95	0.16055					10	4	3	0	0	0	0.89176	1	44465	44465		0.79363	0	1	137020000	+		24345	13200	12110	12165	28079	28079					-0.01592624165630241
PELPVPLTQV	10	Unmodified	_PELPVPLTQV_					0	0	0			REV__ENST00000489526.1_1_10:102762295-102762823:+|nuORF	REV__ENST00000489526.1_1_10:102762295-102762823:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8201171755791	2	546.818607	1091.62266	2.4194	0.001323	-0.33541	-0.00018341	2.084	0.0011396	546.8185197225661	75.558	0.37123	75.88	75.678	76.049	0.32163					27	11	3	0	0	0	0.78468	1	31621	31621		13.906	0.39817	1	2810900	+		24346	8229	12111	12166	28080	28080					0.08051469308588821
PELRKLRRQ	9	Unmodified	_PELRKLRRQ_					0	0	0			REV__ENSG00000186710|ENST00000335621|CFAP73	REV__ENSG00000186710|ENST00000335621|CFAP73	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2499572634697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.902	1	17.053	16.553	17.553	0.15093								0	0	0	0.42693	1	7013	7013		0.23584	0	1		+		24347	11509	12112	12167	28081	28081					0.14134698402426693
PELYGGRLLL	10	Unmodified	_PELYGGRLLL_					0	0	0			REV__ENST00000310340.9_1_4:493020-493164:+|nuORF	REV__ENST00000310340.9_1_4:493020-493164:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.2850829958916	2	565.832049	1129.64954	1.6348	0.000925	-0.39279	-0.00022226	1.242	0.00070274	565.8318052782944	48.371	0.1553	49.758	49.618	49.774	1.388					6	4	2	0	0	0	0.12495	1	20204	20204		11.495	2.1473	1	344700	+		24348	12359	12113	12168	28082	28082					0.08990577919826137
PENSAPLIEF	10	Unmodified	_PENSAPLIEF_					0	0	0		nc|ENSG00000164190|Q6KC79-2|NIPBL;ENSG00000164190|ENST00000282516|NIPBL;ENST00000514335.1_1_5:37051847-37064632:+|nuORF	nc|ENSG00000164190|Q6KC79-2|NIPBL	nc|ENSG00000164190|Q6KC79-2|NIPBL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1116.563647449017	1	1116.55717	1115.54989	2.3639	0.0026394	2.6718	0.0029832	5.0357	0.0056227	1116.5620501245485	79.503	0.40443	80.754	80.582	80.987	1.2512					27	12	3	0	0	0	0.79268	1	33445	33445		13.042	2.2185	1	1840400			24349	3759	12114	12169	28083	28083					-0.0032628448479954386
PEQFKKWR	8	Unmodified	_PEQFKKWR_					0	0	0			REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant	REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3120605349541	2	559.808908	1117.60326	1.4335	0.00080249	0.54	0.00030229	1.9735	0.0011048	560.3085509067083	45.979	0.66417	45.979	45.625	46.289	0					31	20	2	0	0	0	0.88261	1	19326	19326		7.2892	1.5574	1	408870	+		24350	14234	12115	12170	28084	28084					0.04916557808383004
PEQLPQHRPGD	11	Unmodified	_PEQLPQHRPGD_					0	0	0		ENSG00000161328|ENST00000270115|LRRC56	ENSG00000161328|ENST00000270115|LRRC56	ENSG00000161328|ENST00000270115|LRRC56	MSMS	GG20161007_CRH_Patient100_A02_01	1	637.3208495974541	2	637.317825	1272.6211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.309	1	40.309	39.809	40.809	0								0	0	0	0.63775	1	16887	16887		5.7319	0	1				24351	3594	12116	12171	28085	28085					-0.004307717274286915
PEQQKRKQL	9	Unmodified	_PEQQKRKQL_					0	0	0		tr|A0A553SJI2|A0A553SJI2_NIACIDivergentPAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_16845PE=4SV=1	tr|A0A553SJI2|A0A553SJI2_NIACIDivergentPAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_16845PE=4SV=1	tr|A0A553SJI2|A0A553SJI2_NIACIDivergentPAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_16845PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8351318240166	2	577.835654	1153.65676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.496	1	37.313	36.813	37.813	1.8176								0	0	0	0.29347	1	14885	14885		19.257	3.4098	1				24352	16250	12117	12172	28086	28086					0.08607310520233113
PEQVLLLPQP	10	Unmodified	_PEQVLLLPQP_					0	0	0		nc|ENSG00000039600|O94993-2|SOX30;ENSG00000039600|ENST00000265007|SOX30	nc|ENSG00000039600|O94993-2|SOX30	nc|ENSG00000039600|O94993-2|SOX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3324462771416	2	567.331882	1132.64921	4.7046	0.0026691	-3.4794	-0.001974	1.2252	0.00069509	567.3293381443019	88.682	0.32127	90.129	89.985	90.306	1.4467					19	9	3	0	0	0	0.88314	1	37377	37377		3.2813	1.7994	1	2098700			24353	659	12118	12173	28087	28087					0.0881915819995811
PERFPRRL	8	Unmodified	_PERFPRRL_					0	0	0		ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1645385622978	2	535.814525	1069.6145	1.8456	0.00098891	-1.5024	-0.00080499	0.34326	0.00018392	535.8139211390876	42.69	0.28082	44.03	43.827	44.108	1.3399					15	8	2	0	0	0	2.3239	1	17826	17826		2.5775	0.51773	1	2074500			24354	7527	12119	12174	28088	28088					0.08247379902513785
PERFPRRL	8	Unmodified	_PERFPRRL_					0	0	0		ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	ENST00000597415.5_2_19:49956542-49956632:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	535.814525	1069.6145	1.8682	0.001001	-2.1661	-0.0011606	-0.2979	-0.00015962	535.813601060117	42.115	0.21605	44.037	43.887	44.103	1.9211	0.0033852	-0.00049989	NaN	2.5775	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1806200			24355	7527	12119	12174							0.08247379902513785
PERHRARPR	9	Unmodified	_PERHRARPR_					0	0	0		ENST00000378953.8_2_5:131746438-131755609:+|nuORF	ENST00000378953.8_2_5:131746438-131755609:+|nuORF	ENST00000378953.8_2_5:131746438-131755609:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	392.2277404665947	3	392.226995	1173.65916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.32	1	103.38	102.88	103.88	0.059502								0	0	0	0.42693	1	43314	43314		0.23584	0	1				24356	6207	12120	12175	28089	28089					0.07927203768531399
PERLKERFQLQ	11	Unmodified	_PERLKERFQLQ_					0	0	0		tr|A0A553SP31|A0A553SP31_NIACIRibosomebiogenesisGTPaseAOS=NialliacirculansOX=1397GN=ylqFPE=3SV=1	tr|A0A553SP31|A0A553SP31_NIACIRibosomebiogenesisGTPaseAOS=NialliacirculansOX=1397GN=ylqFPE=3SV=1	tr|A0A553SP31|A0A553SP31_NIACIRibosomebiogenesisGTPaseAOS=NialliacirculansOX=1397GN=ylqFPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	722.5062133669853	2	722.406975	1442.7994	2.708	0.0019563	-2.7997	-0.0020225	-0.091761	-6.6289E-05	722.4050570952685	114.2	0.35592	114.25	114	114.35	0.042839					15	10	2	0	0	0	0.14606	1	49091	49091		1.1933	0	1	437300			24357	16447	12121	12176	28090	28090					0.09570898191600463
PERRGHGH	8	Unmodified	_PERRGHGH_					0	0	0		ENST00000394540.3_1_11:64009493-64010699:+|nuORF	ENST00000394540.3_1_11:64009493-64010699:+|nuORF	ENST00000394540.3_1_11:64009493-64010699:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	945.4792968630791	1	945.476171	944.468895	1.1618	0.0010985	0.58315	0.00055136	1.745	0.0016498	945.4776590109128	104.84	0.071396	104.84	104.79	104.86	0					9	3	3	0	0	0	0.89176	1	44354	44354		0.79363	0	1	55729000			24358	6284	12122	12177	28091	28091					-0.005560828936722828
PERWRRHHRRQ	11	Unmodified	_PERWRRHHRRQ_					0	0	0			REV__ENSG00000132716|ENST00000368074|DCAF8	REV__ENSG00000132716|ENST00000368074|DCAF8	MSMS	GG20161007_CRH_Patient100_A02_01	1	807.4418212771416	2	807.440872	1612.86719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.987	1	60.987	60.487	61.487	0								0	0	0	0.63775	1	25431	25431		0.30703	0.30703	1		+		24359	9858	12123	12178	28092	28092					0.08527205685618355
PESDYCYDDWS	11	Unmodified	_PESDYCYDDWS_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MSMS	GG20161007_CRH_Patient100_W632_01	3	690.2407714724541	2	690.240257	1378.46596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.676	1	96.96	96.46	97.46	0.28442								0	0	0	0.63775	1	40678	40678		1.3295	0.9789	1		+		24360	8690	12124	12179	28093	28093					-0.20813228434690245
PESGRGRCGDH	11	Unmodified	_PESGRGRCGDH_					0	0	0		ENST00000361441.4_1_22:39413982-39414048:+|nuORF	ENST00000361441.4_1_22:39413982-39414048:+|nuORF	ENST00000361441.4_1_22:39413982-39414048:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	390.2032348513603	3	390.840477	1169.4996	-0.94848	-0.0003707	2.803	0.0010955	1.8545	0.00072483	390.84250361038283	11.26	1.4896	11.93	11.338	12.828	0.66934					83	47	2	0	0	0	0.14606	1	4749	4749		2.2527	0.40849	1	1025200			24361	6039	12125	12180	28094	28094					-0.07836717361578849
PETEPTEPAEK	11	Unmodified	_PETEPTEPAEK_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.2921630740166	2	614.290608	1226.56666	1.3171	0.00080908	0.53029	0.00032575	1.8474	0.0011348	614.2917602685557	23.704	0.24388	23.704	23.566	23.81	0					17	7	3	0	0	0	0.66268	1	9880	9880		19.362	1.2156	1	776430	+		24362	10141	12126	12181	28095	28095					-0.03755828389512317
PETEPTEPAEK	11	Unmodified	_PETEPTEPAEK_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	614.290608	1226.56666	1.3171	0.00080908	0.53029	0.00032575	1.8474	0.0011348	614.2917602685557	23.704	0.24388	23.704	23.566	23.81	0	-0.13283	-0.00062685	NaN	19.362	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	776430	+		24363	10141	12126	12181							-0.03755828389512317
PETEPTEPAEK	11	Unmodified	_PETEPTEPAEK_					0	0	0			REV__ENSG00000141371|ENST00000269127|CHCT1	REV__ENSG00000141371|ENST00000269127|CHCT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	614.290608	1226.56666	0.68182	0.00041883	1.9984	0.0012276	2.6802	0.0016464	614.2926966921918	23.727	0.21947	23.969	23.823	24.043	0.24251	0.13283	0.0011768	NaN	19.362	10	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	229080	+		24364	10141	12126	12181							-0.03755828389512317
PEVLNKQGH	9	Unmodified	_PEVLNKQGH_					0	0	0		ENSG00000145632|ENST00000274289|PLK2	ENSG00000145632|ENST00000274289|PLK2	ENSG00000145632|ENST00000274289|PLK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1883422732353	3	341.185691	1020.53524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.529	1	88.764	88.264	89.264	0.23471								0	0	0	0.42693	1	37119	37119		1.0715	0	1				24365	3114	12127	12182	28096	28096					0.025796881577207387
PEVRTEKLCLK	11	Unmodified	_PEVRTEKLCLK_					0	0	0		ENST00000504176.6_1_4:113351697-113351934:+|nuORF	ENST00000504176.6_1_4:113351697-113351934:+|nuORF	ENST00000504176.6_1_4:113351697-113351934:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	658.3731567263603	2	658.373755	1314.73296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.43	1	94.302	93.802	94.802	0.87176								0	0	0	0.63774	1	39320	39320		7.609	1.4032	1				24366	6995	12128	12183	28097	28097					0.08817946305339319
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	453.7236816287041	2	453.721436	905.428318	1.7229	0.00078173	1.2981	0.00058899	3.0211	0.0013707	453.7218756494113	41.19	0.44991	41.19	40.986	41.435	0					31	13	4	0	0	0	0.77833	3	17211	17211;17255;17298		23.148	3.8914	1	1841400			24367	7000	12129	12184	28098;28099;28100	28098					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	453.7236511111259	2	453.721436	905.428318	1.7545	0.00079604	0.35971	0.00016321	2.1142	0.00095925	453.7214295600997	42.137	0.53269	42.137	41.724	42.257	0					22	16	2	0	0	0	0.84871	2	17586	17586;17633		16.942	2.3606	1	588230			24368	7000	12129	12184	28101;28102	28101					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7227050662041	2	453.721436	905.428318	2.2767	0.001033	1.0798	0.00048992	3.3565	0.0015229	453.7217169487789	40.686	0.37817	41.003	40.794	41.172	0.31683					25	11	3	0	0	0	0.77833	1	17108	17108		23.148	0.41214	1	1393500			24369	7000	12129	12184	28103	28103					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7230407595634	2	453.721436	905.428318	2.3267	0.0010557	0.45695	0.00020733	2.7837	0.001263	453.72155274026113	41.643	0.37046	41.959	41.728	42.099	0.31683					18	11	2	0	0	0	0.83518	2	17497	17448;17497		18.135	3.2967	1	616310			24370	7000	12129	12184	28104;28105	28105					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7223388552666	2	453.721436	905.428318	2.52	0.0011434	-0.12781	-5.7989E-05	2.3922	0.0010854	453.72158321251493	39.228	0.31835	40.524	40.382	40.701	1.2961					15	9	2	0	0	0	0.84871	1	16442	16442		16.942	3.0362	1	1900500			24371	7000	12129	12184	28106	28106					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7227966189384	2	453.721436	905.428318	1.4315	0.00064949	0.86812	0.00039389	2.2996	0.0010434	453.72170064384903	38.672	0.31915	40.508	40.335	40.654	1.8366					18	9	3	0	0	0	0.77833	2	16200	16200;16256		23.148	2.3606	1	1414600			24372	7000	12129	12184	28107;28108	28107					-0.02817862056656395
PEVWFATG	8	Unmodified	_PEVWFATG_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	453.721436	905.428318	2.5324	0.001149	-0.31421	-0.00014257	2.2182	0.0010064	453.72094492866535	40.019	0.27554	41.329	41.207	41.483	1.3102	0.15488	-0.0011245	NaN	23.148	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	720070			24373	7000	12129	12184							-0.02817862056656395
PEWCPLAAQ	9	Unmodified	_PEWCPLAAQ_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.3359557986259	2	507.739302	1013.46405	2.7836	0.0014134	-3.6889	-0.001873	-0.90523	-0.00045962	507.7369456925238	71.156	0.29656	72.497	72.392	72.689	1.3415					14	9	2	0	0	0	0.10844	1	29928	29928		11.64	4.9171	1	1427400			24374	1219	12130	12185	28109	28109					-0.04214147871334717
PEWCPLAAQ	9	Unmodified	_PEWCPLAAQ_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	507.739302	1013.46405	1.2476	0.00063346	-0.34063	-0.00017295	0.90698	0.00046051	507.73854479821955	70.686	0.30418	72.524	72.349	72.653	1.8378	0.013324	0.0011646	NaN	7.2892	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	845400			24375	1219	12130	12185							-0.04214147871334717
PEWLWTWWINF	11	Unmodified	_PEWLWTWWINF_					0	0	0		ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.5903808474541	3	526.590717	1576.75032	1.844	0.00097105	-2.5376	-0.0013363	-0.69362	-0.00036525	526.5891737087593	40.708	0.94256	40.708	40.331	41.274	0					85	29	4	0	0	0	1.0365	1	17139	17139		1.2148	0.76031	1	2725300			24376	5179	12131	12186	28110	28110					-0.014983900973447817
PEWLWTWWINF	11	Unmodified	_PEWLWTWWINF_					0	0	0		ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	526.590717	1576.75032	1.8458	0.00097198	-2.2403	-0.0011797	-0.39451	-0.00020775	526.589709898316	40.294	0.8131	40.607	40.227	41.04	0.31262	-0.050541	0.00023691	NaN	1.2148	40	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	787690			24377	5179	12131	12186							-0.014983900973447817
PEYIALNKDA	10	Unmodified	_PEYIALNKDA_					0	0	0		tr|A0A553SG37|A0A553SG37_NIACIIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10015PE=4SV=1	tr|A0A553SG37|A0A553SG37_NIACIIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10015PE=4SV=1	tr|A0A553SG37|A0A553SG37_NIACIIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2986938357353	2	567.295496	1132.57644	2.7856	0.0015802	3.2919	0.0018675	6.0775	0.0034477	567.2971330479346	79.532	0.40443	80.783	80.582	80.987	1.2512					39	12	4	0	0	0	0.8325	1	33443	33443		8.7454	2.0222	1	4256400			24378	16094	12132	12187	28111	28111					0.015454044065336348
PFACPPWT	8	Unmodified	_PFACPPWT_					0	0	0			REV__ENST00000495655.2_1_22:19864636-19868294:-|nuORF	REV__ENST00000495655.2_1_22:19864636-19868294:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.8106567263603	3	306.810796	917.41056	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.811	1	32.102	31.602	32.602	0.29086								0	0	0	1.0178	1	13352	13352		0.45834	0	1		+		24379	13461	12133	12188	28112	28112					-0.05144900583184153
PFAIRVQVP	9	Unmodified	_PFAIRVQVP_					0	0	0			REV__ENST00000503670.5_1_6:30854463-30854742:+|nuORF	REV__ENST00000503670.5_1_6:30854463-30854742:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8753234744072	3	342.874677	1025.6022	0.35916	0.00012315	1.2656	0.00043395	1.6248	0.0005571	342.8749917234561	32.192	0.48498	34.016	33.818	34.303	1.8246					51	16	4	0	0	0	0.82654	1	13509	13509		2.2828	0.3764	1	17134000	+		24380	13519	12134	12189	28113	28113					0.0904234343945518
PFAPAIQTF	9	Unmodified	_PFAPAIQTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2670165896416	2	496.26601	990.517468	2.9633	0.0014706	0.92297	0.00045804	3.8863	0.0019286	496.266476958344	61.524	0.39889	62.942	62.714	63.113	1.4177					31	12	3	0	0	0	0.03795	2	25762	25762;25808		77.984	38.027	1	4844600			24381	4605	12135	12190	28114;28115	28114					0.021829729028468137
PFAPAIQTF	9	Unmodified	_PFAPAIQTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5277587771416	1	991.524744	990.517468	4.4897	0.0044516	-1.1531	-0.0011433	3.3366	0.0033084	991.5230002679405	61.555	0.27679	62.973	62.804	63.081	1.4177					15	8	2	0	0	0	0.031324	1	25802	25802		85.357	51.254	1	953110			24382	4605	12135	12190	28116	28116					0.021829729028468137
PFAPAIQTF	9	Unmodified	_PFAPAIQTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2671081423759	2	496.26601	990.517468	2.6206	0.0013005	0.79083	0.00039246	3.4114	0.001693	496.2665930416208	60.966	0.39656	62.932	62.76	63.157	1.9653					31	12	3	0	0	0	0.061246	2	25611	25566;25611		63.563	31.308	1	4062100			24383	4605	12135	12190	28117;28118	28118					0.021829729028468137
PFAPNNDNI	9	Unmodified	_PFAPNNDNI_					0	0	0			REV__nc|ENSG00000240184|Q9UN70-2|PCDHGC3	REV__nc|ENSG00000240184|Q9UN70-2|PCDHGC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.2948181033134	2	501.237981	1000.46141	3.0913	0.0015495	-0.44189	-0.00022149	2.6495	0.001328	501.7382556907322	65.218	0.28081	66.617	66.443	66.724	1.3989					12	8	2	0	0	0	0.10306	1	27343	27343		8.5933	0	1	375310	+		24384	11917	12136	12191	28119	28119					-0.03880280004625547
PFATLVDPC	9	Unmodified	_PFATLVDPC_					0	0	0			REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	962.4698974490166	1	962.46518	961.457904	2.3565	0.002268	3.395	0.0032676	5.7515	0.0055356	962.4695016114283	62.877	0.27707	64.29	64.162	64.439	1.4134					15	8	2	0	0	0	0.34572	1	26401	26401		23.148	3.7094	1	1121500	+		24385	8906	12137	12192	28120	28120					-0.024366661028466297
PFATLVDPC	9	Unmodified	_PFATLVDPC_					0	0	0			REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	962.46518	961.457904	2.3565	0.002268	3.395	0.0032676	5.7515	0.0055356	962.4695016114283	62.877	0.27707	64.29	64.162	64.439	1.4134	-0.028589	0.0013138	NaN	23.148	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1121500	+		24386	8906	12137	12192							-0.024366661028466297
PFATLVDPC	9	Unmodified	_PFATLVDPC_					0	0	0			REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	REV__nc|ENSG00000091622|Q9BZ71-2|PITPNM3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	962.46518	961.457904	3.0457	0.0029314	1.6683	0.0016057	4.714	0.0045371	962.4676595790133	62.39	0.27066	64.347	64.18	64.451	1.9571	0.028589	-0.00034801	NaN	23.148	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	857500	+		24387	8906	12137	12192							-0.024366661028466297
PFCEKQTSLG	10	Unmodified	_PFCEKQTSLG_					0	0	0		ENST00000358141.6_1_10:72136285-72142312:-|nuORF;ENST00000355790.8_2_10:72136285-72141266:-|nuORF	ENST00000358141.6_1_10:72136285-72142312:-|nuORF	ENST00000358141.6_1_10:72136285-72142312:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	555.3369018435478	2	555.268424	1108.5223	1.0716	0.00059501	-1.0283	-0.00057096	0.043311	2.4049E-05	555.2675457757352	77.487	0.34269	79.238	78.977	79.32	1.7514					28	10	3	0	0	0	0.12448	1	32415	32415		12.241	4.3305	1	2581200			24388	5982	12138	12193	28121	28121					-0.027625110166809463
PFCHHCCKGM	10	Unmodified	_PFCHHCCKGM_					0	0	0			REV__nc|ENSG00000278522|A0JP26-2|POTEB3	REV__nc|ENSG00000278522|A0JP26-2|POTEB3	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1520263552666	3	388.151953	1161.43403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.208	1	21.418	20.918	21.918	0.21024								0	0	0	0.66264	1	8811	8811		0	0	1		+		24389	11380	12139	12194	28122	28122					-0.14022869404175253
PFCHHCCKGM	10	Unmodified	_PFCHHCCKGM_					0	0	0			REV__nc|ENSG00000278522|A0JP26-2|POTEB3	REV__nc|ENSG00000278522|A0JP26-2|POTEB3	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1520568728447	3	388.151953	1161.43403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.782	1	23.015	22.515	23.515	0.23306								0	0	0	0.66264	1	9499	9499		0	0	1		+		24390	11380	12139	12194	28123	28123					-0.14022869404175253
PFCHHCCKGM	10	Unmodified	_PFCHHCCKGM_					0	0	0			REV__nc|ENSG00000278522|A0JP26-2|POTEB3	REV__nc|ENSG00000278522|A0JP26-2|POTEB3	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1525756716728	3	388.151953	1161.43403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.561	1	24.804	24.304	25.304	0.24251								0	0	0	0.66264	1	10251	10251		0	0	1		+		24391	11380	12139	12194	28124	28124					-0.14022869404175253
PFCLSAYT	8	Unmodified	_PFCLSAYT_					0	0	0			REV__nc|ENSG00000012779|P09917-5|ALOX5	REV__nc|ENSG00000012779|P09917-5|ALOX5	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1418945193291	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.736	1	71.06	70.56	71.56	0.32359								0	0	0	1.0178	1	29611	29611		0.40072	0	1		+		24392	8539	12140	12195	28125	28125					-0.04904624165669702
PFCRICHE	8	Unmodified	_PFCRICHE_					0	0	0		nc|ENSG00000099785|Q9P0N8-2|MARCHF2;ENSG00000099785|ENST00000215555|MARCHF2	nc|ENSG00000099785|Q9P0N8-2|MARCHF2	nc|ENSG00000099785|Q9P0N8-2|MARCHF2	MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7267333865166	2	502.725672	1003.43679	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.842	1	52.167	51.667	52.667	0.32553								0	0	0	1.0178	1	21718	21718		2.3027	0	1				24393	1214	12141	12196	28126	28126					-0.06478954683348093
PFDEIVKVL	9	Unmodified	_PFDEIVKVL_					0	0	0			REV__ENSG00000136699|ENST00000680298|SMPD4	REV__ENSG00000136699|ENST00000680298|SMPD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3113281130791	2	530.307875	1058.6012	5.8791	0.0031177	-2.1524	-0.0011414	3.7267	0.0019763	530.3076408698079	88.767	0.90277	89.823	89.53	90.433	1.0562					43	27	2	0	0	0	0.44535	1	37378	37378		18.135	1.1927	1	3007200	+		24394	9987	12142	12197	28127	28127					0.07424084279887211
PFDVYRRTK	9	Unmodified	_PFDVYRRTK_					0	0	0			REV__ENSG00000112249|ENST00000369162|ASCC3	REV__ENSG00000112249|ENST00000369162|ASCC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	590.8242675662041	2	591.324922	1180.63529	2.2547	0.0013333	-3.4853	-0.0020609	-1.2306	-0.00072768	591.3215788631196	75.903	0.31482	76.224	75.925	76.24	0.32163					13	9	2	0	0	0	0.11645	1	31690	31690		8.5933	0	1	624780	+		24395	9360	12143	12198	28128	28128					0.05219925491496724
PFELKIEEL	9	Unmodified	_PFELKIEEL_					0	0	0			REV__nc|ENSG00000100583|Q9P1V8-2|SAMD15	REV__nc|ENSG00000100583|Q9P1V8-2|SAMD15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3128539919853	2	559.310615	1116.60668	1.5769	0.00088198	3.6154	0.0020221	5.1923	0.0029041	559.3124592536657	71.443	0.38387	71.767	71.622	72.006	0.32359					26	11	3	0	0	0	0.3091	1	29909	29909		24.991	0.97039	1	1201400	+		24396	8997	12144	12199	28129	28129					0.05303763071697176
PFEMDSDSGP	10	Unmodified	_PFEMDSDSGP_					0	0	0		ENSG00000131381|ENST00000253699|RBSN	ENSG00000131381|ENST00000253699|RBSN	ENSG00000131381|ENST00000253699|RBSN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1082.096850574017	1	1081.41427	1080.40699	0.31719	0.00034302	-4.0826	-0.004415	-3.7654	-0.004072	1081.4119239787858	35.298	0.049438	36.573	36.553	36.603	1.2746					6	4	2	0	0	0	0.84024	1	14821	14821		7.9102	0.62092	1	2528100			24397	2487	12145	12200	28130	28130					-0.12999659938350305
PFERPFIL	8	Unmodified	_PFERPFIL_					0	0	0			REV__ENST00000464036.5_1_1:1190585-1197670:-|nuORF	REV__ENST00000464036.5_1_1:1190585-1197670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7906066775322	2	509.789653	1017.56475	2.4808	0.0012647	0.24548	0.00012514	2.7262	0.0013898	509.7895926351298	43.965	0.31939	45.909	45.734	46.053	1.9438					21	9	3	0	0	0	0.76103	1	18452	18452		24.674	0	1	1833000	+		24398	10588	12146	12201	28131	28131					0.056672521738505566
PFFIAFVSF	9	Unmodified	_PFFIAFVSF_					0	0	0			REV__nc|ENSG00000074803|Q13621-3|SLC12A1	REV__nc|ENSG00000074803|Q13621-3|SLC12A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7888671755791	2	537.786579	1073.5586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.61	1	60.579	60.079	61.079	1.969								0	0	0	0.22015	1	24589	24589		24.674	4.2203	1		+		24399	8755	12147	12202	28132	28132					0.02476733942330611
PFFNPIQTQVF	11	Unmodified	_PFFNPIQTQVF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	669.3517944216728	2	669.348063	1336.68157	2.2686	0.0015185	2.6626	0.0017822	4.9312	0.0033007	669.3490416403091	83.153	0.27748	84.341	84.174	84.452	1.1879					14	8	2	0	0	0	0.048196	1	34885	34885		85.272	59.004	1	1549700			24400	3062	12148	12203	28133	28133					0.02669945602929147
PFFNPIQTQVF	11	Unmodified	_PFFNPIQTQVF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	669.348063	1336.68157	2.5057	0.0016772	0.22681	0.00015181	2.7325	0.001829	669.3483178514241	82.672	0.3336	84.342	84.113	84.447	1.67	0.00050526	-0.0024713	NaN	85.272	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1777000			24401	3062	12148	12203							0.02669945602929147
PFFSYHLA	8	Unmodified	_PFFSYHLA_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|95|3|sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|95|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2466308474541	2	491.245078	980.475603	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.128	1	65.455	64.955	65.955	0.32689								0	0	0	1.0178	1	27274	27274		0.79363	0	1		+		24402	14202	12149	12204	28134	28134					-0.015415827856713804
PFFVWLIP	8	Unmodified	_PFFVWLIP_					0	0	0		AluSz_dup62464|chr11:45826485-45826829:+|1.903267986190745|0.001166169941416|10.67|428.0|18|2|anti-sense	AluSz_dup62464|chr11:45826485-45826829:+|1.903267986190745|0.001166169941416|10.67|428.0|18|2|anti-sense	AluSz_dup62464|chr11:45826485-45826829:+|1.903267986190745|0.001166169941416|10.67|428.0|18|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1962158083916	3	340.196868	1017.56878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.385	1	40.698	40.198	41.198	0.31263								0	0	0	1.0178	1	16978	16978		0.45834	0	1				24403	52	12150	12205	28135	28135					0.06069341667569006
PFGAVYREV	9	Unmodified	_PFGAVYREV_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2748290896416	2	519.274367	1036.53418	2.6397	0.0013707	-1.658	-0.00086096	0.98166	0.00050975	519.2734937809879	75.933	0.6029	77.227	76.943	77.546	1.2938					45	19	3	0	0	0	0.28226	2	31859	31859;31921		26.341	5.9311	1	6432200	+		24404	11539	12151	12206	28136;28137	28136					0.017374737888076197
PFGAVYREV	9	Unmodified	_PFGAVYREV_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2737914919853	2	519.274367	1036.53418	2.7965	0.0014521	-0.45578	-0.00023668	2.3407	0.0012155	519.2741402288257	75.491	0.48587	77.273	76.978	77.463	1.7817					38	15	3	0	0	0	0.20838	1	31634	31634		32.117	5.7757	1	4861700	+		24405	11539	12151	12206	28138	28138					0.017374737888076197
PFGAVYREV	9	Unmodified	_PFGAVYREV_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	519.274367	1036.53418	2.6397	0.0013707	-1.658	-0.00086096	0.98166	0.00050975	519.2734937809879	75.933	0.6029	77.227	76.943	77.546	1.2938	-0.022805	-0.00031486	NaN	32.117	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6432200	+		24406	11539	12151	12206							0.017374737888076197
PFGAVYREV	9	Unmodified	_PFGAVYREV_					0	0	0			REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	REV__nc|ENSG00000187609|Q8N9H8-4|EXD3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	519.274367	1036.53418	2.7965	0.0014521	-0.45578	-0.00023668	2.3407	0.0012155	519.2741402288257	75.491	0.48587	77.273	76.978	77.463	1.7817	0.022805	0.0009337	NaN	32.117	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4861700	+		24407	11539	12151	12206							0.017374737888076197
PFGLRLRAV	9	Unmodified	_PFGLRLRAV_					0	0	0		tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	tr|A0A553SNU3|A0A553SNU3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_25160PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8223144412041	2	514.821818	1027.62908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.7	1	73.025	72.525	73.525	0.32494								0	0	0	0.27219	1	30415	30415		20.871	3.9289	1				24408	16435	12152	12207	28139	28139					0.11637452050626962
PFGPLQAEWV	10	Unmodified	_PFGPLQAEWV_					0	0	0			REV__ENST00000489159.1_1_1:150530894-150532669:+|nuORF	REV__ENST00000489159.1_1_1:150530894-150532669:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	572.8420898318291	2	572.295299	1142.57605	1.535	0.00087846	-4.2569	-0.0024362	-2.7219	-0.0015577	572.2934435878976	66.633	0.39185	68.522	68.341	68.733	1.8889					18	12	2	0	0	0	0.12493	1	28035	28035		6.7232	1.9672	1	959460	+		24409	13415	12153	12208	28140	28140					0.010460294773110945
PFHALSLFL	9	Unmodified	_PFHALSLFL_					0	0	0			REV__ENST00000339420.6_1_3:44958011-44958284:-|nuORF	REV__ENST00000339420.6_1_3:44958011-44958284:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7993652224541	2	522.797478	1043.5804	2.6077	0.0013633	0.69671	0.00036424	3.3044	0.0017275	522.7976100602843	76.149	0.79247	77.443	77.16	77.952	1.2938					73	25	4	0	0	0	0.20838	1	32079	32079		32.117	0	1	8251000	+		24410	12488	12154	12209	28141	28141					0.060355386908895525
PFHKHSLKI	9	Unmodified	_PFHKHSLKI_					0	0	0		ENST00000418527.1_1_2:110935626-110935722:-|nuORF	ENST00000418527.1_1_2:110935626-110935722:-|nuORF	ENST00000418527.1_1_2:110935626-110935722:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8315917849541	2	553.827101	1105.63965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.165	1	70.53	70.03	71.03	1.3657								0	0	0	0.36184	1	29022	29022		12.532	0	1				24411	6428	12155	12210	28142	28142					0.09105434705065818
PFIESIFIK	9	Unmodified	_PFIESIFIK_					0	0	0			REV__ENST00000403263.5_1_2:206860830-206860965:-|nuORF	REV__ENST00000403263.5_1_2:206860830-206860965:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3186523318291	2	547.318243	1092.62193	1.7766	0.00097237	-0.93172	-0.00050995	0.84489	0.00046242	547.317624149477	82.024	0.33591	82.024	81.763	82.099	0					17	10	2	0	0	0	0.5697	1	34149	34149		12.532	3.1484	1	907960	+		24412	12891	12156	12211	28143	28143					0.0793267465955978
PFILLLLPL	9	Unmodified	_PFILLLLPL_					0	0	0			REV__ENST00000479733.5_1_10:71561880-71562105:+|nuORF	REV__ENST00000479733.5_1_10:71561880-71562105:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1038.701464831829	1	1038.69617	1037.68889	1.2631	0.001312	0.65383	0.00067913	1.9169	0.0019911	1038.6983501158345	101.19	0.13794	101.19	101.12	101.26	0					7	4	3	0	0	0	0.39097	1	42378	42378		20.871	0	1	4111500	+		24413	13338	12157	12212	28144	28144					0.17155329941329
PFIRKQTL	8	Unmodified	_PFIRKQTL_					0	0	0		ENSG00000151503|ENST00000534548|NCAPD3;ENST00000525964.6_1_11:134022841-134052943:-|nuORF	ENSG00000151503|ENST00000534548|NCAPD3	ENSG00000151503|ENST00000534548|NCAPD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.8073608279228	2	501.808377	1001.6022	1.2856	0.00064515	-1.9656	-0.00098638	-0.68	-0.00034123	501.80814081301185	77.016	0.57619	78.767	78.623	79.2	1.7514					30	17	2	0	0	0	0.86202	1	32366	32366		15.768	1.1865	1	960550			24414	3292	12158	12213	28145	28145					0.10146343439475913
PFIVKYHYR	9	Unmodified	_PFIVKYHYR_					0	0	0			REV__ENST00000397641.7_1_22:31363909-31363960:-|nuORF	REV__ENST00000397641.7_1_22:31363909-31363960:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3428222537041	2	611.840208	1221.66586	2.6402	0.0016154	-0.92776	-0.00056764	1.7124	0.0010477	611.8386905125108	85.437	1.1973	86.569	86.152	87.35	1.1326					120	47	3	0	0	0	0.85019	1	36211	36211		0.52476	0	1	107710000	+		24415	12866	12159	12214	28146	28146					0.06389703876538988
PFIVKYHYR	9	Unmodified	_PFIVKYHYR_					0	0	0			REV__ENST00000397641.7_1_22:31363909-31363960:-|nuORF	REV__ENST00000397641.7_1_22:31363909-31363960:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3441650271416	2	611.840208	1221.66586	3.737	0.0022865	-1.9408	-0.0011875	1.7962	0.001099	611.8383180885869	86.025	0.36689	87.572	87.323	87.69	1.547					27	14	2	0	0	0	0.85019	1	36208	36208		0.52476	0	1	73997000	+		24416	12866	12159	12214	28147	28147					0.06389703876538988
PFIWIKKFLRR	11	Unmodified	_PFIWIKKFLRR_					0	0	0			REV__ENST00000541657.5_3_12:122240596-122240792:-|nuORF	REV__ENST00000541657.5_3_12:122240596-122240792:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.9819518923759	3	501.98188	1502.92381	2.2061	0.0011074	-3.0239	-0.0015179	-0.81782	-0.00041053	501.9803075173285	61.08	0.81188	63.045	62.79	63.602	1.9653					69	25	4	0	0	0	1.0357	1	25730	25730		0.50596	0.41111	1	8480400	+		24417	13754	12160	12215	28148	28148					0.19246440469578374
PFKSPSIGF	9	Unmodified	_PFKSPSIGF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2667724490166	2	490.26601	978.517468	1.827	0.00089572	0.59725	0.00029281	2.4243	0.0011885	490.2661126921235	42.572	0.34732	43.912	43.667	44.014	1.3399					17	10	2	0	0	0	0.14534	2	17823	17823;17875		49.554	26.406	1	908910			24418	4798	12161	12216	28149;28150	28149					0.027349729028628644
PFKSPSIGF	9	Unmodified	_PFKSPSIGF_					0	0	0		ENST00000486283.1_1_7:129497270-129520783:-|nuORF;ENSG00000186591|ENST00000355621|UBE2H	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	ENST00000486283.1_1_7:129497270-129520783:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2674438357353	2	490.26601	978.517468	1.7971	0.00088106	1.8787	0.00092106	3.6758	0.0018021	490.26715557184065	42.012	0.34164	43.933	43.731	44.072	1.9211					17	10	2	0	0	0	0.24465	1	17602	17602		36.506	14.76	1	590380			24419	4798	12161	12216	28151	28151					0.027349729028628644
PFKVIPEMWS	10	Unmodified	_PFKVIPEMWS_					0	0	0			REV__ENSG00000134020|ENST00000256404|PEBP4	REV__ENSG00000134020|ENST00000256404|PEBP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	411.8845092654228	3	411.882732	1232.62637	2.8379	0.0011689	1.9143	0.00078846	4.7522	0.0019573	411.88390878867057	90.361	0.43269	90.57	90.34	90.772	0.20904					55	13	6	0	0	0	0.89803	1	37897	37897		0.69767	0.07084	1	2927500	+		24420	9890	12162	12217	28152	28152					0.019358158108389034
PFLDPIPANP	10	Unmodified	_PFLDPIPANP_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1081.578051745892	1	1080.57242	1079.56515	2.2174	0.0023961	-2.2032	-0.0023807	0.014262	1.5411E-05	1080.5685803450963	36.151	0.036613	36.453	36.431	36.467	0.30196					4	2	2	0	0	0	0.77604	1	15201	15201		14.838	1.3304	1	6816900	+		24421	8548	12163	12218	28153	28153					0.028546271030336356
PFLERGVGLR	10	Unmodified	_PFLERGVGLR_					0	0	0		ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.8936035037041	3	381.892619	1142.65603	2.2155	0.00084609	-3.4336	-0.0013113	-1.2181	-0.00046519	381.89194355096646	59.026	0.3484	60.995	60.814	61.162	1.969					19	10	3	0	0	0	0.12545	1	24787	24787		2.086	0.60411	1	512980			24422	7357	12164	12219	28154	28154					0.09040515871174648
PFLERGVGLR	10	Unmodified	_PFLERGVGLR_					0	0	0		ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	381.892619	1142.65603	2.067	0.00078935	-6.7149	-0.0025644	-4.648	-0.001775	381.89154402019886	60.843	0.22051	61.171	61.076	61.296	0.32809	0.13557	-0.0039387	NaN	3.8763	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299960			24423	7357	12164	12219							0.09040515871174648
PFLERGVGLR	10	Unmodified	_PFLERGVGLR_					0	0	0		ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	ENST00000566056.1_1_16:30959736-30965162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	381.892619	1142.65603	1.7217	0.00065752	-2.9971	-0.0011446	-1.2753	-0.00048704	381.89144996163765	59.521	0.37702	60.941	60.769	61.146	1.4196	-0.094958	0.0003208	NaN	3.8763	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618500			24424	7357	12164	12219							0.09040515871174648
PFLLGLRT	8	Unmodified	_PFLLGLRT_					0	0	0			REV__ENST00000348520.10_2_14:104168248-104168920:+|nuORF	REV__ENST00000348520.10_2_14:104168248-104168920:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1921874880791	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.004	1	48.004	47.504	48.504	0								0	0	0	1.0178	1	20055	20055		0.45834	0	1		+		24425	12527	12165	12220	28155	28155					0.09303269519432433
PFLPKPLFF	9	Unmodified	_PFLPKPLFF_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3275634646416	2	553.325871	1104.63719	2.641	0.0014614	0.013579	7.5135E-06	2.6546	0.0014689	553.3259666689088	79.348	0.46881	80.615	80.378	80.846	1.2668					46	14	4	0	0	0	0.026628	2	33323	33274;33323		92.822	32.433	1	5409300			24426	3546	12166	12221	28156;28157	28157					0.08905586247419706
PFLPKPLFF	9	Unmodified	_PFLPKPLFF_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3267089724541	2	553.325871	1104.63719	2.0841	0.0011532	-0.086762	-4.8008E-05	1.9973	0.0011052	553.3257204072581	78.831	0.46412	80.566	80.319	80.784	1.735					42	14	4	0	0	0	0.031324	2	33034	33034;33089		85.357	31.781	1	4486200			24427	3546	12166	12221	28158;28159	28158					0.08905586247419706
PFLPLLLLAAP	11	Unmodified	_PFLPLLLLAAP_					0	0	0		ENST00000493548.5_1_6:32122153-32123690:+|nuORF;nc|ENSG00000258388|Q9UMR5-2|PPT2;ENSG00000221988|ENST00000324816|PPT2;nc|ENSG00000258388|Q9UMR5-3|PPT2	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	ENST00000493548.5_1_6:32122153-32123690:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1280090212822	3	388.917882	1163.73182	1.6854	0.00065549	2.6601	0.0010345	4.3455	0.00169	389.2531393100738	40.471	0.43871	40.783	40.665	41.103	0.31263					19	13	2	0	0	0	0.14606	1	16977	16977		0.50596	0.051438	1	433950			24428	5278	12167	12222	28160	28160					0.15650099998742917
PFLQPGRLV	9	Unmodified	_PFLQPGRLV_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8753539919853	3	342.874677	1025.6022	0.91476	0.00031365	1.5397	0.00052791	2.4544	0.00084156	342.8749919624501	34.499	0.43511	34.798	34.542	34.977	0.29922					51	15	5	0	0	0	0.82114	1	14448	14448		2.4985	0.75621	1	10069000			24429	656	12168	12223	28161	28161					0.0904234343945518
PFLVALAL	8	Unmodified	_PFLVALAL_					0	0	0		nc|ENSG00000159363|Q9NQ11-3|ATP13A2;ENSG00000159363|ENST00000326735|ATP13A2;ENST00000466561.1_1_1:17312718-17313137:-|nuORF	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	nc|ENSG00000159363|Q9NQ11-3|ATP13A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2702819705009	2	422.270564	842.526576	1.3038	0.00055054	-3.7391	-0.0015789	-2.4353	-0.0010284	422.2695447210883	82.977	0.40099	82.977	82.706	83.107	0					17	12	2	0	0	0	0.89176	1	34589	34589		0.79363	0	1	1067000			24430	3525	12169	12224	28162	28162					0.09901366259157385
PFLWHCDI	8	Unmodified	_PFLWHCDI_					0	0	0			REV__ENST00000367569.3_1_6:144416040-144416157:-|nuORF	REV__ENST00000367569.3_1_6:144416040-144416157:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7491332888603	2	515.744388	1029.47422	2.7829	0.0014353	3.1831	0.0016417	5.9661	0.003077	515.7459222516966	80.879	0.40421	82.575	82.425	82.829	1.6959					22	12	2	0	0	0	0.67986	1	33950	33950		32.117	1.4804	1	785420	+		24431	12628	12170	12225	28163	28163					-0.039335401460903086
PFLWHCDI	8	Unmodified	_PFLWHCDI_					0	0	0			REV__ENST00000367569.3_1_6:144416040-144416157:-|nuORF	REV__ENST00000367569.3_1_6:144416040-144416157:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	515.744388	1029.47422	2.7829	0.0014353	3.1831	0.0016417	5.9661	0.003077	515.7459222516966	80.879	0.40421	82.575	82.425	82.829	1.6959	0.013073	0.00011281	NaN	32.117	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785420	+		24432	12628	12170	12225							-0.039335401460903086
PFNLLRIPG	9	Unmodified	_PFNLLRIPG_					0	0	0		nc|ENSG00000119866|Q9H165-2|BCL11A;nc|ENSG00000119866|Q9H165-6|BCL11A;ENSG00000119866|ENST00000642384|BCL11A;chr2:60546300-60550868|396|14.15|0.81|4.12|-|ENST00000643459|BCL11A,BCL11A;BCL11A|p.V393Ffs*37|1|0.03|ENSG00000119866|chr2:60461736-60461737|-/GCGATGGGGAAGGGGAGTGGTGAAAA|frameshift_variant	nc|ENSG00000119866|Q9H165-2|BCL11A	nc|ENSG00000119866|Q9H165-2|BCL11A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8747131228447	3	342.874677	1025.6022	-0.70207	-0.00024072	2.1552	0.00073897	1.4532	0.00049825	342.87524809146396	32.825	0.43128	34.103	33.887	34.319	1.2782					50	15	4	0	0	0	0.67936	1	13825	13825		8.1555	0	1	12945000			24433	2087	12171	12226	28164	28164					0.0904234343945518
PFNQGIPLT	9	Unmodified	_PFNQGIPLT_					0	0	0			REV__nc|ENSG00000103888|Q8WUJ3-2|CEMIP	REV__nc|ENSG00000103888|Q8WUJ3-2|CEMIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7721130251884	2	493.768917	985.523281	1.8329	0.00090503	2.3557	0.0011631	4.1886	0.0020682	493.7705805981959	41.803	0.56968	43.695	43.413	43.983	1.8927					34	17	3	0	0	0	0.46905	1	17471	17471		16.942	2.3606	1	1922000	+		24434	9122	12172	12227	28165	28165					0.029940714145254788
PFPGPGQYEI	10	Unmodified	_PFPGPGQYEI_					0	0	0		nc|ENSG00000001460|Q5TH74-2|STPG1;nc|ENSG00000001460|Q5TH74-3|STPG1;ENSG00000001460|ENST00000337248|STPG1	nc|ENSG00000001460|Q5TH74-2|STPG1	nc|ENSG00000001460|Q5TH74-2|STPG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7745239138603	2	552.771657	1103.52876	2.6664	0.0014739	2.5072	0.0013859	5.1736	0.0028598	552.7733375083963	79.065	0.4697	80.332	80.034	80.504	1.2668					43	14	4	0	0	0	0.81324	1	33237	33237		10.824	0.64053	1	10401000			24435	456	12173	12228	28166	28166					-0.018862497936879663
PFPLLCFLHRV	11	Unmodified	_PFPLLCFLHRV_					0	0	0		ENST00000339142.6_2_17:77020258-77030443:+|nuORF;ENST00000582295.1_1_17:77020258-77021030:+|nuORF;ENST00000580454.5_2_17:77019075-77040120:+|nuORF;ENST00000579760.5_2_17:77020159-77040120:+|nuORF	ENST00000339142.6_2_17:77020258-77030443:+|nuORF	ENST00000339142.6_2_17:77020258-77030443:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	671.3790771365166	2	671.378643	1340.74273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.25	1	44.603	44.103	45.103	1.3536								0	0	0	0.63775	1	18127	18127		3.5965	0.31518	1				24436	5925	12174	12229	28167	28167					0.08599179101361187
PFPLLRFW	8	Unmodified	_PFPLLRFW_					0	0	0			REV__ENST00000551051.5_1_12:113546023-113565713:-|nuORF	REV__ENST00000551051.5_1_12:113546023-113565713:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2003051638603	3	359.207767	1074.60147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.428	1	99.428	98.928	99.928	0								0	0	0	1.0178	1	41613	41613		0.45834	0	1		+		24437	9326	12175	12230	28168	28168					0.06715548790407411
PFPLLWGAK	9	Unmodified	_PFPLLWGAK_					0	0	0			REV__ENSG00000260220|ENST00000638797|CCDC187	REV__ENSG00000260220|ENST00000638797|CCDC187	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5353271365166	3	343.535772	1027.58549	-2.0528	-0.0007052	-0.15262	-5.2429E-05	-2.2054	-0.00075763	343.5355899446851	26.141	0.88451	26.141	25.472	26.357	0					63	28	3	0	0	0	0.84531	1	10722	10722		1.1933	0.23107	1	3239800	+		24438	11983	12176	12231	28169	28169					0.07279842553521121
PFQQMSLQI	9	Unmodified	_PFQQMSLQI_					0	0	0		ENST00000472469.5_2_3:58870372-59035390:-|nuORF	ENST00000472469.5_2_3:58870372-59035390:-|nuORF	ENST00000472469.5_2_3:58870372-59035390:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2824584841728	2	546.281334	1090.54812	3.7845	0.0020674	-0.22842	-0.00012478	3.556	0.0019426	546.2812894960709	95.84	0.1866	96.262	96.158	96.344	0.4212					10	5	2	0	0	0	0.34572	1	40329	40329		23.148	6.2061	1	1129600			24439	6751	12177	12232	28170	28170					0.00646383225603131
PFQQMSLQI	9	Unmodified	_PFQQMSLQI_					0	0	0		ENST00000472469.5_2_3:58870372-59035390:-|nuORF	ENST00000472469.5_2_3:58870372-59035390:-|nuORF	ENST00000472469.5_2_3:58870372-59035390:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	546.281334	1090.54812	2.7071	0.0014788	-1.2591	-0.00068784	1.448	0.000791	546.2806483832802	96.165	0.13176	96.27	96.187	96.319	0.105	0.0039674	-0.00049354	NaN	23.148	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533870			24440	6751	12177	12232							0.00646383225603131
PFRARPSV	8	Unmodified	_PFRARPSV_					0	0	0			REV__nc|ENSG00000143970|Q76L83-2|ASXL2	REV__nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2713806033134	2	465.269419	928.524284	2.1325	0.00099217	1.0178	0.00047357	3.1503	0.0014657	465.2704424526523	94.326	0.36692	94.326	94.119	94.486	0					29	11	3	0	0	0	0.88504	1	39388	39388		5.7604	0	1	1702700	+		24441	10230	12178	12233	28171	28171					0.05716330574091444
PFRARPSV	8	Unmodified	_PFRARPSV_					0	0	0			REV__nc|ENSG00000143970|Q76L83-2|ASXL2	REV__nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2728454470634	2	465.269419	928.524284	3.5689	0.0016605	2.0083	0.00093438	5.5772	0.0025949	465.2704382192935	92.582	0.39046	93.909	93.666	94.057	1.3269					20	11	2	0	0	0	0.87803	1	38923	38923		10.183	0	1	1804100	+		24442	10230	12178	12233	28172	28172					0.05716330574091444
PFRARPSV	8	Unmodified	_PFRARPSV_					0	0	0			REV__nc|ENSG00000143970|Q76L83-2|ASXL2	REV__nc|ENSG00000143970|Q76L83-2|ASXL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	465.269419	928.524284	2.1325	0.00099217	1.0178	0.00047357	3.1503	0.0014657	465.2704424526523	94.326	0.36692	94.326	94.119	94.486	0	-0.018295	-0.00012753	NaN	5.7604	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1702700	+		24443	10230	12178	12233							0.05716330574091444
PFRFDESSHR	10	Unmodified	_PFRFDESSHR_					0	0	0			REV__ENSG00000183808|ENST00000520560|RBM12B	REV__ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_W632_01	3	639.3052245974541	2	639.304718	1276.59488	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.937	1	60.357	59.857	60.857	1.4196								0	0	0	0.65539	1	24708	24708		9.3831	2.0939	1		+		24444	11405	12179	12234	28173	28173					-0.03235040898925945
PFRKYYAL	8	Unmodified	_PFRKYYAL_					0	0	0			REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2962524294853	2	529.295102	1056.57565	5.2769	0.002793	-3.6332	-0.0019231	1.6437	0.00086999	529.2932889396392	89.32	0.60078	90.34	90.138	90.739	1.0199					30	18	2	0	0	0	0.89008	1	37645	37645		2.5775	0.27475	1	859970	+		24445	12492	12180	12235	28174	28174					0.04962654548126011
PFRKYYAL	8	Unmodified	_PFRKYYAL_					0	0	0			REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	REV__ENST00000340724.6_2_12:123957087-123997908:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	529.295102	1056.57565	5.2769	0.002793	-3.6332	-0.0019231	1.6437	0.00086999	529.2932889396392	89.32	0.60078	90.34	90.138	90.739	1.0199	0	0	NaN	2.5775	30	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	859970	+		24446	12492	12180	12235							0.04962654548126011
PFRRGFRE	8	Unmodified	_PFRRGFRE_					0	0	0			REV__nc|ENSG00000132768|Q9BQC3-3|DPH2	REV__nc|ENSG00000132768|Q9BQC3-3|DPH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1064.736376941204	1	1064.57482	1063.56755	0.81467	0.00086728	-3.5123	-0.0037391	-2.6976	-0.0028718	1065.5719423644257	36.956	0.05365	38.232	38.192	38.246	1.2762					6	4	2	0	0	0	0.87803	1	15512	15512		10.183	0.83596	1	4921900	+		24447	9860	12181	12236	28175	28175					0.038305203513800734
PFRSCLFRLF	10	Unmodified	_PFRSCLFRLF_					0	0	0			REV__NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant	REV__NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	643.3491088747978	2	643.347343	1284.68013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.222	1	98.45	97.95	98.95	0.22776								0	0	0	0.65895	1	41339	41339		10.824	5.0921	1		+		24448	8561	12182	12237	28176	28176					0.049180330332092126
PFSAAATPPGA	11	Unmodified	_PFSAAATPPGA_					0	0	0		ENST00000455062.2_1_7:74197704-74203407:+|nuORF;ENST00000423083.1_1_7:72644023-72649727:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	986.5019409060478	1	986.494172	985.486896	1.6069	0.0015852	2.9517	0.0029119	4.5586	0.004497	986.4972333715481	71.114	0.41582	71.114	70.811	71.227	0					21	12	2	0	0	0	0.33951	1	29625	29625		29.082	5.9332	1	739530			24449	6456	12183	12238	28177	28177					-0.006428054821981277
PFSAAATPPGA	11	Unmodified	_PFSAAATPPGA_					0	0	0		ENST00000455062.2_1_7:74197704-74203407:+|nuORF;ENST00000423083.1_1_7:72644023-72649727:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	986.5023071169853	1	986.494172	985.486896	1.4518	0.0014322	3.88	0.0038276	5.3318	0.0052598	986.498530807882	70.543	0.55096	70.866	70.591	71.141	0.32224					29	17	2	0	0	0	0.33951	1	29481	29481		29.082	5.9332	1	755640			24450	6456	12183	12238	28178	28178					-0.006428054821981277
PFSAAATPPGA	11	Unmodified	_PFSAAATPPGA_					0	0	0		ENST00000455062.2_1_7:74197704-74203407:+|nuORF;ENST00000423083.1_1_7:72644023-72649727:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	ENST00000455062.2_1_7:74197704-74203407:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.4995605349541	1	986.494172	985.486896	3.2652	0.0032211	3.8586	0.0038064	7.1238	0.0070276	986.498653758817	69.349	0.46849	70.715	70.501	70.969	1.3657					23	15	2	0	0	0	0.24984	1	29116	29116		36.127	2.0246	1	2268600			24451	6456	12183	12238	28179	28179					-0.006428054821981277
PFSGLVAMV	9	Unmodified	_PFSGLVAMV_					0	0	0			REV__ENST00000425785.1_1_1:98011504-98011909:+|nuORF	REV__ENST00000425785.1_1_1:98011504-98011909:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.4971801638603	1	920.491001	919.483725	1.7771	0.0016358	2.9079	0.0026767	4.685	0.0043125	920.494029887029	67.145	1.286	68.534	68.184	69.47	1.3888					111	41	4	0	0	0	0.1735	1	28518	28518		36.044	7.5574	1	14547000	+		24452	8569	12184	12239	28180	28180					0.02076228139446812
PFSYQGEPH	9	Unmodified	_PFSYQGEPH_					0	0	0		ENSG00000153902|ENST00000310123|LGI4	ENSG00000153902|ENST00000310123|LGI4	ENSG00000153902|ENST00000310123|LGI4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0703613162041	3	354.494413	1060.46141	2.259	0.0008008	-1.1993	-0.00042515	1.0597	0.00037565	354.4946096664423	73.856	0.34413	75.174	74.966	75.31	1.318					15	10	2	0	0	0	0.11938	1	31003	31003		0.26902	0	1	470770			24453	3368	12185	12240	28181	28181					-0.0664028000462622
PFVDHVFTF	9	Unmodified	_PFVDHVFTF_					0	0	0		ENSG00000113460|ENST00000336767|BRIX1	ENSG00000113460|ENST00000336767|BRIX1	ENSG00000113460|ENST00000336767|BRIX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7779418826103	2	554.776742	1107.53893	3.0278	0.0016798	-1.8113	-0.0010049	1.2165	0.0006749	554.7763895200221	64.81	0.65513	66.217	65.985	66.64	1.4071					61	20	5	0	0	0	2.1581E-05	4	27171	27121;27171;27209;27255		171.47	121.53	1	59639000			24454	1823	12186	12241	28182;28183;28184;28185	28183					-0.010536420684275072
PFVDHVFTF	9	Unmodified	_PFVDHVFTF_					0	0	0		ENSG00000113460|ENST00000336767|BRIX1	ENSG00000113460|ENST00000336767|BRIX1	ENSG00000113460|ENST00000336767|BRIX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7780639529228	2	554.776742	1107.53893	2.3749	0.0013175	-1.1733	-0.00065094	1.2015	0.00066659	554.7766284892724	64.289	0.72835	66.217	65.981	66.709	1.928					55	22	4	0	0	0	1.4293E-06	3	26973	26935;26973;27012		187.93	140.18	1	62405000			24455	1823	12186	12241	28186;28187;28188	28187					-0.010536420684275072
PFVLKGRG	8	Unmodified	_PFVLKGRG_					0	0	0		tr|A0A553SMS3|A0A553SMS3_NIACIXanthinedehydrogenasesubunitDOS=NialliacirculansOX=1397GN=pucDPE=4SV=1	tr|A0A553SMS3|A0A553SMS3_NIACIXanthinedehydrogenasesubunitDOS=NialliacirculansOX=1397GN=pucDPE=4SV=1	tr|A0A553SMS3|A0A553SMS3_NIACIXanthinedehydrogenasesubunitDOS=NialliacirculansOX=1397GN=pucDPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2689391970634	2	437.268887	872.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.374	1	40.67	40.17	41.17	1.2961								0	0	0	1.0178	1	16516	16516		2.5775	0.27475	1				24456	16388	12187	12242	28189	28189					0.0818611620518368
PFVLQHIDAI	10	Unmodified	_PFVLQHIDAI_					0	0	0		tr|A0A553SLW6|A0A553SLW6_NIACIGlobin-coupledsensorproteinOS=NialliacirculansOX=1397GN=CEQ21_21425PE=3SV=1	tr|A0A553SLW6|A0A553SLW6_NIACIGlobin-coupledsensorproteinOS=NialliacirculansOX=1397GN=CEQ21_21425PE=3SV=1	tr|A0A553SLW6|A0A553SLW6_NIACIGlobin-coupledsensorproteinOS=NialliacirculansOX=1397GN=CEQ21_21425PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8264037966728	2	576.824224	1151.63389	2.756	0.0015898	-0.74588	-0.00043024	2.0102	0.0011595	576.8240316002214	76.279	0.40913	78.046	77.813	78.222	1.7672					38	12	4	0	0	0	0.70618	1	32035	32035		18.146	5.6148	1	6895200			24457	16359	12188	12243	28190	28190					0.06414291402757044
PFVNGCCY	8	Unmodified	_PFVNGCCY_					0	0	0		ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	ENSG00000164946|ENST00000380880|FREM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.6815978884697	2	451.680399	901.346245	2.3438	0.0010586	0.3638	0.00016432	2.7076	0.001223	451.68032036303214	42.493	0.36996	42.814	42.636	43.006	0.32058					18	11	2	0	0	0	0.88958	1	17830	17830		2.8892	0	1	640440			24458	3808	12189	12244	28191	28191					-0.1083742373162977
PFVTASNVKTI	11	Unmodified	_PFVTASNVKTI_					0	0	0		NUTM1|p.P313Lfs*2|1|0.3|ENSG00000184507|chr15:34353816-34353816|C/-|frameshift_variant;nc|ENSG00000184507|Q86Y26-2|NUTM1;NUTM1|p.P408Afs*9|1|0.07|ENSG00000184507|chr15:34354675-34354676|-/G|frameshift_variant;nc|ENSG00000184507|Q86Y26|NUTM1;nc|ENSG00000184507|Q86Y26-3|NUTM1;ENSG00000184507|ENST00000537011|NUTM1	NUTM1|p.P313Lfs*2|1|0.3|ENSG00000184507|chr15:34353816-34353816|C/-|frameshift_variant	NUTM1|p.P313Lfs*2|1|0.3|ENSG00000184507|chr15:34353816-34353816|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	588.8332397341728	2	588.834788	1175.65502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.834	1	58.248	57.748	58.748	1.4145								0	0	0	0.61799	1	23820	23820		20.415	3.4722	1				24459	4696	12190	12245	28192	28192					0.07422256711629416
PFWCQTHS	8	Unmodified	_PFWCQTHS_					0	0	0			REV__ENST00000590152.1_1_19:9267354-9267447:+|nuORF	REV__ENST00000590152.1_1_19:9267354-9267447:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2172729372978	2	503.215995	1004.41744	1.4022	0.00070561	1.5592	0.00078463	2.9614	0.0014902	503.2168922452599	77.851	0.55252	79.602	79.379	79.932	1.7514					85	17	7	0	0	0	0.88055	1	32669	32669		8.5933	0.68312	1	15235000	+		24460	14061	12191	12246	28193	28193					-0.08459587702600402
PFWLRHSRAPQ	11	Unmodified	_PFWLRHSRAPQ_					0	0	0		ENSG00000269855|ENST00000601382|RNF225	ENSG00000269855|ENST00000601382|RNF225	ENSG00000269855|ENST00000601382|RNF225	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	697.8766967654228	2	697.875645	1393.73674	2.2551	0.0015738	0.91551	0.00063891	3.1706	0.0022127	697.8761459417681	59.657	0.42926	59.657	59.355	59.784	0					32	18	2	0	0	0	0.87205	2	24849	24849;24906		11.495	0	1	2707200			24461	5443	12192	12247	28194;28195	28194					0.05561796914093975
PFWPLSCFP	9	Unmodified	_PFWPLSCFP_					0	0	0			REV__ENST00000286692.8_1_1:111682258-111682414:-|nuORF	REV__ENST00000286692.8_1_1:111682258-111682414:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	547.3162719607353	2	547.262413	1092.51027	5.6879	0.0031127	0.34239	0.00018737	6.0302	0.0033001	547.2622257032584	88.748	0.48462	89.804	89.466	89.951	1.0562					17	14	2	0	0	0	0.11787	1	37329	37329		5.2307	0	1	579790	+		24462	12272	12193	12248	28196	28196					-0.032280829692126645
PGAAALPK	8	Unmodified	_PGAAALPK_					0	0	0		PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant;PRSS16|p.A421Gfs*38|1|0.41|ENSG00000112812|chr6:27254803-27254804|-/GATCCCTGCCTTGTGGC|frameshift_variant;ENSG00000112812|ENST00000230582|PRSS16	PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant	PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.4359619021416	1	724.435201	723.427924	2.454	0.0017778	-2.1235	-0.0015384	0.33047	0.00023941	724.4334493073743	70.575	0.41682	71.928	71.712	72.129	1.3536					23	12	2	0	0	0	0.89176	1	29647	29647		0.79363	0	1	2622400			24463	1797	12194	12249	28197	28197					0.05514763014127766
PGAAALPK	8	Unmodified	_PGAAALPK_					0	0	0		PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant;PRSS16|p.A421Gfs*38|1|0.41|ENSG00000112812|chr6:27254803-27254804|-/GATCCCTGCCTTGTGGC|frameshift_variant;ENSG00000112812|ENST00000230582|PRSS16	PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant	PRSS16|p.Q420Hfs*22|1|0.58|ENSG00000112812|chr6:27254801-27254802|-/TCATGTTTCCTCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.4334594607353	1	724.435201	723.427924	1.5258	0.0011054	-3.3658	-0.0024383	-1.8399	-0.0013329	724.4327740902527	70.209	0.44433	72.047	71.784	72.228	1.8378					21	13	2	0	0	0	0.89176	1	29460	29460		0.79363	0	1	2281000			24464	1797	12194	12249	28198	28198					0.05514763014127766
PGAAIIIV	8	Unmodified	_PGAAIIIV_					0	0	0			REV__tr|A0A7D6VRP5|A0A7D6VRP5_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12965PE=3SV=1	REV__tr|A0A7D6VRP5|A0A7D6VRP5_9CLOTL-lactatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2473327517509	2	377.247089	752.479626	2.6478	0.00099887	-1.5263	-0.00057581	1.1214	0.00042306	377.24635416052195	98.8	0.11374	98.997	98.93	99.044	0.19767					5	3	2	0	0	0	0.89176	1	41608	41608		0.79363	0	1	1616100	+		24465	15418	12195	12250	28199	28199					0.0934850670803371
PGAGGGTE	8	Unmodified	_PGAGGGTE_					0	0	0		ENST00000487949.4_1_1:6531427-6531640:-|nuORF	ENST00000487949.4_1_1:6531427-6531640:-|nuORF	ENST00000487949.4_1_1:6531427-6531640:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	323.1467162966728	2	323.145561	644.276569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.02	1	104.07	103.57	104.57	0.059502								0	0	0	1.0178	1	43782	43782		0.69038	0	1				24466	6883	12196	12251	28200	28200					-0.059798430843784445
PGALPKAG	8	Unmodified	_PGALPKAG_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.4186889529228	1	710.419551	709.412274	2.5246	0.0017935	-3.0822	-0.0021897	-0.55761	-0.00039613	710.4171645355646	60.469	0.49185	61.889	61.597	62.089	1.4196					32	15	3	0	0	0	0.89008	1	25318	25318		2.5775	0	1	4564800	+		24467	9765	12197	12252	28201	28201					0.04594476497084088
PGALPKAG	8	Unmodified	_PGALPKAG_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	710.419551	709.412274	2.3808	0.0016913	-3.1975	-0.0022715	-0.81669	-0.00058019	710.4171793615235	61.596	0.4741	61.596	61.298	61.772	0	-0.21401	-0.00015062	NaN	2.5775	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5985600	+		24468	9765	12197	12252							0.04594476497084088
PGALPKAG	8	Unmodified	_PGALPKAG_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	710.419551	709.412274	1.9978	0.0014193	-3.1486	-0.0022369	-1.1508	-0.00081757	710.4171909945317	61.401	0.52751	61.731	61.422	61.949	0.32974	-0.078797	-0.00011595	NaN	2.5775	38	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6384300	+		24469	9765	12197	12252							0.04594476497084088
PGAPEELRLRK	11	Unmodified	_PGAPEELRLRK_					0	0	0			REV__ENSG00000184814|ENST00000329447|PRR23B	REV__ENSG00000184814|ENST00000329447|PRR23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3726074099541	2	633.369861	1264.72517	1.0752	0.000681	-0.69689	-0.00044139	0.37831	0.00023961	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	1.0131	1	33502	33502		2.9952	0	1	5927400	+		24470	11430	12198	12253	28202	28202					0.10339555100040343
PGAPFLWL	8	Unmodified	_PGAPFLWL_					0	0	0			REV__ENST00000262366.7_1_16:4388647-4388779:+|nuORF	REV__ENST00000262366.7_1_16:4388647-4388779:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	450.2758361697197	2	450.752539	899.490525	2.8091	0.0012662	1.094	0.00049312	3.9031	0.0017594	450.75354052120446	76.246	0.39964	76.568	76.422	76.822	0.32163					31	12	4	0	0	0	2.3239	1	31902	31902		0.79363	0	1	9047900	+		24471	12195	12199	12254	28203	28203					0.03675909082335238
PGAPGASP	8	Unmodified	_PGAPGASP_					0	0	0			REV__ENSG00000185950|ENST00000375856|IRS2	REV__ENSG00000185950|ENST00000375856|IRS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	653.3258544802666	1	653.325316	652.31804	0.28335	0.00018512	0.097426	6.3651E-05	0.38077	0.00024877	653.3252642249555	16.66	0.32162	17.963	17.791	18.112	1.3023					19	10	2	0	0	0	0.88504	1	6902	6902		5.7604	0	1	1374000	+		24472	11483	12200	12255	28204	28204					-0.022026623250440025
PGARRAPG	8	Unmodified	_PGARRAPG_					0	0	0		ENST00000538185.1_1_11:61256765-61256957:+|nuORF	REV__ENST00000215904.6_1_22:38054740-38054869:+|nuORF	REV__ENST00000215904.6_1_22:38054740-38054869:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	781.4442626833916	1	781.442746	780.435469	1.7044	0.0013319	0.31778	0.00024833	2.0222	0.0015802	781.4428199086348	68.627	0.3139	68.627	68.485	68.799	0					12	9	2	0	0	0	0.89176	1	28589	28589		0.79363	0	1	483730			24473	7206	12201	12256	28205	28205					0.03646915334422829
PGARRAPG	8	Unmodified	_PGARRAPG_					0	0	0		ENST00000538185.1_1_11:61256765-61256957:+|nuORF	REV__ENST00000215904.6_1_22:38054740-38054869:+|nuORF	REV__ENST00000215904.6_1_22:38054740-38054869:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	781.442746	780.435469	1.5305	0.001196	2.2448	0.0017541	3.7753	0.0029502	781.4434716393143	68.505	0.27826	68.827	68.689	68.967	0.32224	0.10023	0.0010393	NaN	0.79363	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	730110			24474	7206	12201	12256							0.03646915334422829
PGASDLLVL	9	Unmodified	_PGASDLLVL_					0	0	0		ENST00000394166.7_1_15:96874652-96874724:+|nuORF	ENST00000394166.7_1_15:96874652-96874724:+|nuORF	ENST00000394166.7_1_15:96874652-96874724:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5134765505791	1	884.50876	883.501483	2.3988	0.0021217	0.26469	0.00023412	2.6635	0.0023559	884.5095686507893	65.62	0.36691	67.019	66.817	67.184	1.3989					21	11	2	0	0	0	0.11478	1	27555	27555		44.407	2.3125	1	1756900			24475	6279	12202	12257	28206	28206					0.055072666659384595
PGASDLLVL	9	Unmodified	_PGASDLLVL_					0	0	0		ENST00000394166.7_1_15:96874652-96874724:+|nuORF	ENST00000394166.7_1_15:96874652-96874724:+|nuORF	ENST00000394166.7_1_15:96874652-96874724:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5127441287041	1	884.50876	883.501483	1.6936	0.001498	0.22436	0.00019845	1.918	0.0016965	884.5089207619877	65.17	0.34158	67.078	66.907	67.248	1.9085					19	10	2	0	0	0	0.1735	1	27371	27371		36.044	1.9418	1	1575000			24476	6279	12202	12257	28207	28207					0.055072666659384595
PGASGAHH	8	Unmodified	_PGASGAHH_					0	0	0			REV__ENSG00000126464|ENST00000418929|PRR12	REV__ENSG00000126464|ENST00000418929|PRR12	MSMS	GG20161007_CRH_Patient100_A02_01	1	367.1726867556572	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.07	103.57	104.57	0								0	0	0	1.0178	1	43856	43856		0.79363	0	1		+		24477	9697	12203	12258	28208	28208					-0.04653625861999444
PGASGAHH	8	Unmodified	_PGASGAHH_					0	0	0			REV__ENSG00000126464|ENST00000418929|PRR12	REV__ENSG00000126464|ENST00000418929|PRR12	MSMS	GG20161007_CRH_Patient100_W632_01	3	367.1739379763603	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.276	1	92.258	91.758	92.758	0.98157								0	0	0	1.0178	1	38444	38444		0.79363	0	1		+		24478	9697	12203	12258	28209	28209					-0.04653625861999444
PGCGFLSE	8	Unmodified	_PGCGFLSE_					0	0	0		MCCC1-RAD51B|3|fusion;MCCC1-RAD51B|1|fusion;MCCC1-RAD51B|2|fusion;ENSG00000078070|ENST00000265594|MCCC1	MCCC1-RAD51B|3|fusion	MCCC1-RAD51B|3|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1802551150322	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.464	1	88.464	87.964	88.964	0								0	0	0	1.0178	1	36984	36984		0.79363	0	1				24479	971	12204	12259	28210	28210					-0.06929770233830368
PGCGSSVI	8	Unmodified	_PGCGSSVI_					0	0	0		ENST00000322602.9_1_5:153418645-153418858:+|nuORF	ENST00000322602.9_1_5:153418645-153418858:+|nuORF	ENST00000322602.9_1_5:153418645-153418858:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	719.3412963747978	1	719.339252	718.331975	1.3997	0.0010068	0.53186	0.00038258	1.9315	0.0013894	719.3398176835826	103.64	0.15106	103.64	103.56	103.71	0					15	7	3	0	0	0	0.89178	1	43555	43555		0.69038	0	1	63849000			24480	5858	12205	12260	28211	28211					-0.03845752888253173
PGCGVTFE	8	Unmodified	_PGCGVTFE_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1796447634697	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.695	1	89.695	89.195	90.195	0								0	0	0	1.0178	1	37492	37492		2.5775	1.7838	1				24481	5028	12206	12261	28212	28212					-0.06929770233841737
PGCHAGGG	8	Unmodified	_PGCHAGGG_					0	0	0			REV__ENSG00000185640|ENST00000330553|KRT79	REV__ENSG00000185640|ENST00000330553|KRT79	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1605712771416	2	328.134473	654.254394	-1.4459	-0.00047445	3.4763	0.0011407	2.0304	0.00066626	328.136420765815	12.454	0.24287	13.148	13.042	13.285	0.69395					10	7	2	0	0	0	2.3239	1	5171	5171		0	0	1	168480	+	+	24482	8393	12207	12262	28213	28213					-0.08656346033774298
PGCVGSCF	8	Unmodified	_PGCVGSCF_					0	0	0		ENST00000422840.6_1_16:74486442-74486568:-|nuORF	ENST00000422840.6_1_16:74486442-74486568:-|nuORF	ENST00000422840.6_1_16:74486442-74486568:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1537353396416	2	385.154017	768.293481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.638	1	95.827	95.327	96.327	1.1887								0	0	0	1.0178	1	39816	39816		0.79363	0	1				24483	6454	12208	12263	28214	28214					-0.09993381794436118
PGDGNGDG	8	Unmodified	_PGDGNGDG_					0	0	0		ENST00000513117.1_1_5:6633544-6656205:+|nuORF;ENST00000510531.5_1_5:6633544-6644998:+|nuORF;ENST00000274192.6_2_5:6633463-6652038:+|nuORF	ENST00000513117.1_1_5:6633544-6656205:+|nuORF	ENST00000513117.1_1_5:6633544-6656205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	344.6302673220634	2	344.630275	687.245997	2.1773	0.00075037	-2.2008	-0.00075847	-0.023501	-8.0991E-06	344.62954048918215	88.491	0.38254	88.726	88.567	88.95	0.23471					20	11	2	0	0	0	0.89198	1	37161	37161		0	0	1	546050			24484	5686	12209	12264	28215	28215					-0.11013621469419377
PGDISYTRA	9	Unmodified	_PGDISYTRA_					0	0	0			REV__nc|ENSG00000112851|Q96RT1-7|ERBIN	REV__nc|ENSG00000112851|Q96RT1-7|ERBIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	490.2455016970634	2	490.245806	978.47706	1.3316	0.0006528	-0.014155	-6.9393E-06	1.3174	0.00064586	490.2457512187008	20.872	0.52644	21.082	20.821	21.347	0.21024					34	16	3	0	0	0	0.39927	1	8614	8614		20.454	0	1	1780300	+		24485	9371	12210	12265	28216	28216					-0.013039934875905601
PGDPAQRA	8	Unmodified	_PGDPAQRA_					0	0	0		ENSG00000167702|ENST00000645548|KIFC2;nc|ENSG00000167702|Q96AC6|KIFC2	ENSG00000167702|ENST00000645548|KIFC2	ENSG00000167702|ENST00000645548|KIFC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2098266482353	2	406.206484	810.398415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.37	1	90.775	90.275	91.275	1.4045								0	0	0	1.0178	1	37654	37654		2.3027	0	1				24486	3988	12211	12266	28217	28217					-0.014368010020120892
PGEARGPR	8	Unmodified	_PGEARGPR_					0	0	0		ENST00000480661.1_1_1:6259306-6259615:-|nuORF	ENST00000480661.1_1_1:6259306-6259615:-|nuORF	ENST00000480661.1_1_1:6259306-6259615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.2293578982353	2	420.227751	838.440949	2.5989	0.0010921	0.58696	0.00024666	3.1859	0.0013388	420.2280118591079	72.378	0.51933	73.707	73.423	73.943	1.3297					44	16	3	0	0	0	0.8909	1	30335	30335		2.0598	0	1	7743500			24487	6819	12212	12267	28218	28218					0.015265941262327942
PGETHHLC	8	Unmodified	_PGETHHLC_					0	0	0			REV__LAMB2|p.A1715Sfs*4|1|0.69|ENSG00000172037|chr3:49121550-49121551|-/T|frameshift_variant	REV__LAMB2|p.A1715Sfs*4|1|0.69|ENSG00000172037|chr3:49121550-49121551|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	447.2023803591728	2	447.200344	892.386136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.13	103.63	104.63	0.059502								0	0	0	1.0178	1	43818	43818		0.79363	0	1		+		24488	11055	12213	12268	28219	28219					-0.0643616073668909
PGEVGDNR	8	Unmodified	_PGEVGDNR_					0	0	0		ENSG00000127951|ENST00000248598|FGL2	ENSG00000127951|ENST00000248598|FGL2	ENSG00000127951|ENST00000248598|FGL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	421.8716003298759	2	422.201399	842.388245	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.76	1	16.911	16.411	17.411	0.15093								0	0	0	1.0178	1	6955	6955		6.2058	1.4498	1				24489	2350	12214	12269	28220	28220					-0.03925408727229751
PGEWPHWP	8	Unmodified	_PGEWPHWP_					0	0	0			REV__ENST00000498783.5_1_9:130687427-130690958:-|nuORF	REV__ENST00000498783.5_1_9:130687427-130690958:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	335.0472289919853	3	335.824093	1004.45045	-2.9925	-0.001005	0.9454	0.00031749	-2.0471	-0.00068747	336.1594055949366	10.815	0.67655	10.815	10.402	11.079	0					34	21	2	0	0	0	2.3239	1	4515	4515		1.8442	1.3859	1	194910	+		24490	13497	12215	12270	28221	28221					-0.05159637588246824
PGEWRRGGN	9	Unmodified	_PGEWRRGGN_					0	0	0			REV__ENST00000457894.4_1_X:38664879-38665017:+|nuORF	REV__ENST00000457894.4_1_X:38664879-38665017:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5047485232353	3	343.505535	1027.49478	0.82896	0.00028475	-2.369	-0.00081375	-1.54	-0.000529	343.50490963427677	77.621	0.57986	79.372	79.105	79.684	1.7514					41	18	3	0	0	0	0.7849	1	32582	32582		2.2828	0	1	2303400	+		24491	13175	12216	12271	28222	28222					-0.017872334420417246
PGFSDNAIML	10	Unmodified	_PGFSDNAIML_					0	0	0		nc|ENSG00000198690|Q9Y2M0-2|FAN1;ENSG00000198690|ENST00000362065|FAN1	nc|ENSG00000198690|Q9Y2M0-2|FAN1	nc|ENSG00000198690|Q9Y2M0-2|FAN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1919433474541	2	532.757692	1063.50083	1.9855	0.0010578	-0.90889	-0.00048422	1.0766	0.00057357	532.756026836269	49.419	0.22012	51.396	51.255	51.475	1.9772					11	6	2	0	0	0	0.12438	1	20684	20684		11.64	0.52583	1	693090			24492	5068	12217	12272	28223	28223					-0.028378960454119806
PGFSDNAIML	10	Unmodified	_PGFSDNAIML_					0	0	0		nc|ENSG00000198690|Q9Y2M0-2|FAN1;ENSG00000198690|ENST00000362065|FAN1	nc|ENSG00000198690|Q9Y2M0-2|FAN1	nc|ENSG00000198690|Q9Y2M0-2|FAN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	532.757692	1063.50083	2.5411	0.0013538	-1.8633	-0.00099269	0.67777	0.00036109	532.7570061133198	49.948	0.18977	51.339	51.229	51.419	1.3911	-0.028543	-0.00023655	NaN	11.64	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	567590			24493	5068	12217	12272							-0.028378960454119806
PGGAPGGF	8	Unmodified	_PGGAPGGF_					0	0	0		tr|A0A553SLA6|A0A553SLA6_NIACISporecoatproteinCotDOS=NialliacirculansOX=1397GN=CEQ21_20280PE=4SV=1	tr|A0A553SLA6|A0A553SLA6_NIACISporecoatproteinCotDOS=NialliacirculansOX=1397GN=CEQ21_20280PE=4SV=1	tr|A0A553SLA6|A0A553SLA6_NIACISporecoatproteinCotDOS=NialliacirculansOX=1397GN=CEQ21_20280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.3155395388603	1	659.314751	658.307475	3.1486	0.0020759	-1.1696	-0.00077116	1.979	0.0013048	659.3135822654999	103.81	0.098419	103.98	103.93	104.03	0.1731					10	4	3	0	0	0	0.89198	1	43802	43802		0	0	1	38380000			24494	16327	12218	12273	28224	28224					-0.03534644979481527
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1276122927666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8786	1	9.8786	9.3786	10.379	0								0	0	0	1.0178	1	4069	4069		0.79363	0	1				24495	4481	12219	12274	28225	28225					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1274291872978	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.025	1	10.025	9.5254	10.525	0								0	0	0	1.0178	1	4131	4131		0.79363	0	1				24496	4481	12219	12274	28226	28226					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1273376345634	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.279	1	10.279	9.7789	10.779	0								0	0	0	1.0178	1	4237	4237		0.79363	0	1				24497	4481	12219	12274	28227	28227					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1270324587822	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.809	1	22.809	22.309	23.309	0								0	0	0	1.0178	1	9499	9499		0.79363	0	1				24498	4481	12219	12274	28228	28228					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1273071169853	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.586	1	34.586	34.086	35.086	0								0	0	0	1.0178	1	14497	14497		0	0	1				24499	4481	12219	12274	28229	28229					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1277648806572	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.715	1	34.715	34.215	35.215	0								0	0	0	1.0178	1	14551	14551		0	0	1				24500	4481	12219	12274	28230	28230					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1272155642509	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.833	1	34.833	34.333	35.333	0								0	0	0	1.0178	1	14600	14600		0	0	1				24501	4481	12219	12274	28231	28231					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275207400322	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.053	1	38.053	37.553	38.553	0								0	0	0	1.0178	1	15950	15950		0	0	1				24502	4481	12219	12274	28232	28232					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1279174685478	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.853	1	38.853	38.353	39.353	0								0	0	0	1.0178	1	16287	16287		0.79363	0	1				24503	4481	12219	12274	28233	28233					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1276428103447	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.623	1	41.623	41.123	42.123	0								0	0	0	1.0178	1	17425	17425		0	0	1				24504	4481	12219	12274	28234	28234					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1281005740166	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.089	1	43.089	42.589	43.589	0								0	0	0	1.0178	1	18038	18038		0	0	1				24505	4481	12219	12274	28235	28235					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1283447146416	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.373	1	43.373	42.873	43.873	0								0	0	0	1.0178	1	18158	18158		0	0	1				24506	4481	12219	12274	28236	28236					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1280395388603	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.69	1	43.69	43.19	44.19	0								0	0	0	1.0178	1	18288	18288		0	0	1				24507	4481	12219	12274	28237	28237					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1277953982353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.695	1	46.695	46.195	47.195	0								0	0	0	1.0178	1	19518	19518		0	0	1				24508	4481	12219	12274	28238	28238					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1279479861259	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.714	1	48.714	48.214	49.214	0								0	0	0	1.0178	1	20343	20343		0	0	1				24509	4481	12219	12274	28239	28239					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1278564333916	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.412	1	49.412	48.912	49.912	0								0	0	0	1.0178	1	20627	20627		0	0	1				24510	4481	12219	12274	28240	28240					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1280090212822	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.636	1	60.636	60.136	61.136	0								0	0	0	1.0178	1	25286	25286		0	0	1				24511	4481	12219	12274	28241	28241					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1283141970634	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.921	1	60.921	60.421	61.421	0								0	0	0	1.0178	1	25403	25403		0	0	1				24512	4481	12219	12274	28242	28242					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1272155642509	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.035	1	66.035	65.535	66.535	0								0	0	0	1.0178	1	27513	27513		0	0	1				24513	4481	12219	12274	28243	28243					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1273376345634	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.179	1	69.179	68.679	69.679	0								0	0	0	1.0178	1	28810	28810		0	0	1				24514	4481	12219	12274	28244	28244					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275817751884	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.633	1	71.633	71.133	72.133	0								0	0	0	1.0178	1	29831	29831		0	0	1				24515	4481	12219	12274	28245	28245					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1276428103447	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.059	1	72.059	71.559	72.559	0								0	0	0	1.0178	1	30006	30006		0	0	1				24516	4481	12219	12274	28246	28246					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1272155642509	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.664	1	75.664	75.164	76.164	0								0	0	0	1.0178	1	31498	31498		0	0	1				24517	4481	12219	12274	28247	28247					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1275512576103	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.569	1	76.569	76.069	77.069	0								0	0	0	1.0178	1	31877	31877		0	0	1				24518	4481	12219	12274	28248	28248					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1283752322197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.323	1	78.323	77.823	78.823	0								0	0	0	1.0178	1	32605	32605		0	0	1				24519	4481	12219	12274	28249	28249					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1273376345634	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.15	1	10.228	9.7277	10.728	0.077971								0	0	0	1.0178	1	4208	4208		0.79363	0	1				24520	4481	12219	12274	28250	28250					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1276122927666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.647	1	15.777	15.277	16.277	0.13022								0	0	0	1.0178	1	6493	6493		0.79363	0	1				24521	4481	12219	12274	28251	28251					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1274291872978	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.303	1	25.555	25.055	26.055	0.25197								0	0	0	1.0178	1	10564	10564		0.79363	0	1				24522	4481	12219	12274	28252	28252					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1275512576103	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.602	1	26.864	26.364	27.364	0.26173								0	0	0	1.0178	1	11121	11121		0	0	1				24523	4481	12219	12274	28253	28253					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278259158134	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.707	1	29.993	29.493	30.493	0.2859								0	0	0	1.0178	1	12439	12439		0	0	1				24524	4481	12219	12274	28254	28254					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278869509697	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.613	1	33.91	33.41	34.41	0.29701								0	0	0	1.0178	1	14114	14114		0	0	1				24525	4481	12219	12274	28255	28255					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1279785037041	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.602	1	41.919	41.419	42.419	0.31683								0	0	0	1.0178	1	17473	17473		0	0	1				24526	4481	12219	12274	28256	28256					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278869509697	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.539	1	43.863	43.363	44.363	0.32389								0	0	0	1.0178	1	18279	18279		0	0	1				24527	4481	12219	12274	28257	28257					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1276733279228	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.772	1	51.1	50.6	51.6	0.32824								0	0	0	1.0178	1	21271	21271		0	0	1				24528	4481	12219	12274	28258	28258					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1280090212822	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.399	1	58.722	58.222	59.222	0.32298								0	0	0	1.0178	1	24477	24477		0	0	1				24529	4481	12219	12274	28259	28259					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1292297244072	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.5	1	60.828	60.328	61.328	0.32809								0	0	0	1.0178	1	25351	25351		0	0	1				24530	4481	12219	12274	28260	28260					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1280700564384	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.923	1	63.253	62.753	63.753	0.32974								0	0	0	1.0178	1	26363	26363		0	0	1				24531	4481	12219	12274	28261	28261					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1283752322197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.923	1	64.252	63.752	64.752	0.32899								0	0	0	1.0178	1	26784	26784		0	0	1				24532	4481	12219	12274	28262	28262					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1281616091728	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.472	1	64.801	64.301	65.301	0.32899								0	0	0	1.0178	1	27005	27005		0	0	1				24533	4481	12219	12274	28263	28263					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1270629763603	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.683	1	65.01	64.51	65.51	0.32689								0	0	0	1.0178	1	27093	27093		0	0	1				24534	4481	12219	12274	28264	28264					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1277343630791	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.89	1	66.215	65.715	66.715	0.32449								0	0	0	1.0178	1	27588	27588		0	0	1				24535	4481	12219	12274	28265	28265					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1274597048759	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.745	1	68.068	67.568	68.568	0.32269								0	0	0	1.0178	1	28363	28363		0	0	1				24536	4481	12219	12274	28266	28266					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1283752322197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.843	1	72.168	71.668	72.668	0.32494								0	0	0	1.0178	1	30063	30063		0	0	1				24537	4481	12219	12274	28267	28267					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278869509697	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.141	1	74.466	73.966	74.966	0.32494								0	0	0	1.0178	1	31013	31013		0	0	1				24538	4481	12219	12274	28268	28268					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1280090212822	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.949	1	78.258	77.758	78.758	0.30933								0	0	0	1.0178	1	32594	32594		0	0	1				24539	4481	12219	12274	28269	28269					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1282531619072	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.464	1	78.773	78.273	79.273	0.30933								0	0	0	1.0178	1	32804	32804		0	0	1				24540	4481	12219	12274	28270	28270					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1305114626884	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.592	1	88.827	88.327	89.327	0.23471								0	0	0	1.0178	1	37145	37145		0	0	1				24541	4481	12219	12274	28271	28271					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1297485232353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.685	1	89.909	89.409	90.409	0.22359								0	0	0	1.0178	1	37587	37587		0	0	1				24542	4481	12219	12274	28272	28272					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1272155642509	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5553	1	7.1766	6.6766	7.6766	0.62127								0	0	0	1.0178	1	2709	2709		0	0	1				24543	4481	12219	12274	28273	28273					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274902224541	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.933	1	7.5601	7.0601	8.0601	0.62713								0	0	0	1.0178	1	2866	2866		0.79363	0	1				24544	4481	12219	12274	28274	28274					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.69	1	12.384	11.884	12.884	0.69396								0	0	0	1.0178	1	4856	4856		0	0	1				24545	4481	12219	12274	28275	28275					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273071169853	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.051	1	16.877	16.377	17.377	0.82643								0	0	0	1.0178	1	6672	6672		0.79363	0	1				24546	4481	12219	12274	28276	28276					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1277953982353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.553	1	17.451	16.951	17.951	0.89794								0	0	0	1.0178	1	6883	6883		0	0	1				24547	4481	12219	12274	28277	28277					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1275512576103	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.701	1	17.599	17.099	18.099	0.89794								0	0	0	1.0178	1	6947	6947		0.79363	0	1				24548	4481	12219	12274	28278	28278					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273986697197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.451	1	18.349	17.849	18.849	0.89794								0	0	0	1.0178	1	7263	7263		0	0	1				24549	4481	12219	12274	28279	28279					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1276122927666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.684	1	18.663	18.163	19.163	0.97922								0	0	0	1.0178	1	7360	7360		0	0	1				24550	4481	12219	12274	28280	28280					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1278564333916	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.726	1	19.705	19.205	20.205	0.97922								0	0	0	1.0178	1	7802	7802		0	0	1				24551	4481	12219	12274	28281	28281					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1277953982353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.893	1	19.951	19.451	20.451	1.0585								0	0	0	1.0178	1	7873	7873		0.79363	0	1				24552	4481	12219	12274	28282	28282					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1278259158134	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.137	1	20.195	19.695	20.695	1.0585								0	0	0	1.0178	1	7973	7973		0.79363	0	1				24553	4481	12219	12274	28283	28283					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.795	1	24.009	23.509	24.509	1.2145								0	0	0	1.0178	1	9527	9527		0.79363	0	1				24554	4481	12219	12274	28284	28284					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1273986697197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.93	1	24.145	23.645	24.645	1.2145								0	0	0	1.0178	1	9584	9584		0.79363	0	1				24555	4481	12219	12274	28285	28285					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1277953982353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.177	1	24.391	23.891	24.891	1.2145								0	0	0	1.0178	1	9688	9688		0	0	1				24556	4481	12219	12274	28286	28286					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1274902224541	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.946	1	33.227	32.727	33.727	1.2813								0	0	0	1.0178	1	13400	13400		0	0	1				24557	4481	12219	12274	28287	28287					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1272155642509	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.721	1	33.999	33.499	34.499	1.2782								0	0	0	1.0178	1	13723	13723		0	0	1				24558	4481	12219	12274	28288	28288					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1277953982353	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.212	1	39.503	39.003	40.003	1.2909								0	0	0	1.0178	1	16034	16034		0	0	1				24559	4481	12219	12274	28289	28289					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1281005740166	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.058	1	45.412	44.912	45.912	1.3536								0	0	0	1.0178	1	18473	18473		0	0	1				24560	4481	12219	12274	28290	28290					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1276122927666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.327	1	49.715	49.215	50.215	1.388								0	0	0	1.0178	1	20228	20228		0	0	1				24561	4481	12219	12274	28291	28291					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1274291872978	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0666	1	1.815	1.315	2.315	0.7484								0	0	0	1.0178	1	441	441		0	0	1				24562	4481	12219	12274	28292	28292					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275512576103	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0361	1	6.7669	6.2669	7.2669	0.73074								0	0	0	1.0178	1	2504	2504		0	0	1				24563	4481	12219	12274	28293	28293					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276122927666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3364	1	7.0672	6.5672	7.5672	0.73074								0	0	0	1.0178	1	2628	2628		0	0	1				24564	4481	12219	12274	28294	28294					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1274597048759	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5274	1	7.2582	6.7582	7.7582	0.73074								0	0	0	1.0178	1	2709	2709		0	0	1				24565	4481	12219	12274	28295	28295					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1271850466728	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0351	1	8.7658	8.2658	9.2658	0.73074								0	0	0	1.0178	1	3337	3337		0	0	1				24566	4481	12219	12274	28296	28296					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1274597048759	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3211	1	9.0557	8.5557	9.5557	0.73452								0	0	0	1.0178	1	3458	3458		0	0	1				24567	4481	12219	12274	28297	28297					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275512576103	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.413	1	9.1475	8.6475	9.6475	0.73452								0	0	0	1.0178	1	3497	3497		0.79363	0	1				24568	4481	12219	12274	28298	28298					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1272460818291	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.353	1	11.097	10.597	11.597	0.74462								0	0	0	1.0178	1	4306	4306		0.79363	0	1				24569	4481	12219	12274	28299	28299					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275207400322	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.554	1	12.316	11.816	12.816	0.76165								0	0	0	1.0178	1	4798	4798		0	0	1				24570	4481	12219	12274	28300	28300					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1277038455009	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.937	1	12.725	12.225	13.225	0.78751								0	0	0	1.0178	1	4956	4956		0	0	1				24571	4481	12219	12274	28301	28301					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1271240115166	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.3	1	17.339	16.839	17.839	1.0392								0	0	0	1.0178	1	6769	6769		0	0	1				24572	4481	12219	12274	28302	28302					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1273071169853	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.028	1	23.643	23.143	24.143	1.6158								0	0	0	1.0178	1	9190	9190		0.79363	0	1				24573	4481	12219	12274	28303	28303					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1272765994072	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.691	1	24.342	23.842	24.842	1.6511								0	0	0	1.0178	1	9472	9472		0	0	1				24574	4481	12219	12274	28304	28304					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1278869509697	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.076	1	24.727	24.227	25.227	1.6511								0	0	0	1.0178	1	9634	9634		0.79363	0	1				24575	4481	12219	12274	28305	28305					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275817751884	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.392	1	33.216	32.716	33.716	1.8246								0	0	0	1.0178	1	13160	13160		0	0	1				24576	4481	12219	12274	28306	28306					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1276733279228	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.94	1	50.918	50.418	51.418	1.9772								0	0	0	1.0178	1	20500	20500		0	0	1				24577	4481	12219	12274	28307	28307					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1298095583916	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.832	1	90.279	89.779	90.779	1.4467								0	0	0	1.0178	1	37431	37431		0	0	1				24578	4481	12219	12274	28308	28308					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1281310915947	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.314	1	93.641	93.141	94.141	1.3269								0	0	0	1.0178	1	38860	38860		0	0	1				24579	4481	12219	12274	28309	28309					-0.1536433083929296
PGGCSCDH	8	Unmodified	_PGGCSCDH_					0	0	0		ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	ENSG00000178235|ENST00000674365|SLITRK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1283752322197	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.904	1	95.099	94.599	95.599	1.1947								0	0	0	1.0178	1	39512	39512		0	0	1				24580	4481	12219	12274	28310	28310					-0.1536433083929296
PGGGAGGE	8	Unmodified	_PGGGAGGE_					0	0	0		ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.2581664919853	1	601.257631	600.250354	3.1767	0.00191	-0.7678	-0.00046165	2.4089	0.0014484	601.2567405557669	119.67	1.6728	119.91	118.56	120.24	0.243					103	51	3	0	0	0	0.89176	1	51427	51427		0.79363	0	1	1635600			24581	543	12220	12275	28311	28311					-0.0657611225585697
PGGGAGGE	8	Unmodified	_PGGGAGGE_					0	0	0		ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	ENSG00000010017|ENST00000011619|RANBP9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	601.257631	600.250354	3.2783	0.0019711	0.84887	0.00051039	4.1272	0.0024815	601.258071170973	119.95	0.16199	120.11	120	120.16	0.16584	0.10089	0.00082898	NaN	0.79363	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439090			24582	543	12220	12275							-0.0657611225585697
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	659.2669555544853	1	659.26311	658.255833	1.7853	0.001177	4.2558	0.0028057	6.041	0.0039826	659.2663787062351	96.758	0.25993	96.758	96.665	96.925	0					21	8	3	0	0	0	0.89198	2	40434	40434;40476		0	0	1	5736400	+		24583	12429	12221	12276	28312;28313	28312					-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	659.2648193240166	1	659.26311	658.255833	2.6391	0.0017399	1.5494	0.0010215	4.1885	0.0027613	659.2643244102819	96.543	0.33501	96.648	96.543	96.878	0.105					18	10	3	0	0	0	0.89198	1	40402	40402		0	0	1	5909900	+		24584	12429	12221	12276	28314	28314					-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	659.2671386599541	1	659.26311	658.255833	2.6467	0.0017449	2.2281	0.0014689	4.8748	0.0032138	659.265133385481	97.08	0.21542	97.182	97.067	97.283	0.10193					15	6	3	0	0	0	0.89198	1	40623	40623		0	0	1	11799000	+		24585	12429	12221	12276	28315	28315					-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.2698242068291	1	659.26311	658.255833	3.6468	0.0024042	3.5384	0.0023328	7.1852	0.0047369	659.2662399720389	96.777	0.26401	97.062	96.954	97.218	0.28442					24	8	4	0	0	0	0.89176	1	40757	40757		0.79363	0	1	53859000	+		24586	12429	12221	12276	28316	28316					-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	659.26311	658.255833	1.7307	0.001141	4.8854	0.0032208	6.6161	0.0043618	659.2670659429159	97.244	0.18513	97.244	97.136	97.321	0	0.030923	0.0010239	NaN	0	16	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15591000	+		24587	12429	12221	12276							-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	659.26311	658.255833	1.7853	0.001177	4.2558	0.0028057	6.041	0.0039826	659.2663787062351	96.758	0.25993	96.758	96.665	96.925	0	-0.090706	0.00046272	NaN	0.79363	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5736400	+		24588	12429	12221	12276							-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	659.26311	658.255833	2.6467	0.0017449	2.2281	0.0014689	4.8748	0.0032138	659.265133385481	97.08	0.21542	97.182	97.067	97.283	0.10193	-0.030923	-0.00072795	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11799000	+		24589	12429	12221	12276							-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	659.26311	658.255833	2.6391	0.0017399	1.5494	0.0010215	4.1885	0.0027613	659.2643244102819	96.543	0.33501	96.648	96.543	96.878	0.105	-0.20144	-0.0013215	NaN	0.79363	18	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5909900	+		24590	12429	12221	12276							-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	659.26311	658.255833	3.6468	0.0024042	3.5384	0.0023328	7.1852	0.0047369	659.2662399720389	96.777	0.26401	97.062	96.954	97.218	0.28442	0.21285	-1.0206E-05	NaN	0.79363	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53859000	+		24591	12429	12221	12276							-0.08696433464024267
PGGGEGEG	8	Unmodified	_PGGGEGEG_					0	0	0			REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	REV__ENST00000325568.9_2_16:3119118-3119334:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	659.26311	658.255833	3.16	0.0020833	5.4654	0.0036031	8.6254	0.0056864	659.2672659574924	96.622	0.24866	96.928	96.789	97.038	0.3062	0.079291	0.0012602	NaN	0.79363	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38072000	+		24592	12429	12221	12276							-0.08696433464024267
PGGGGEAG	8	Unmodified	_PGGGGEAG_					0	0	0		ENST00000450547.1_3_15:74642588-74658298:-|nuORF;ENST00000466978.1_1_15:74640533-74658298:-|nuORF	ENST00000450547.1_3_15:74642588-74658298:-|nuORF	ENST00000450547.1_3_15:74642588-74658298:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.2596923708916	1	601.257631	600.250354	1.5725	0.00094549	0.12254	7.3679E-05	1.6951	0.0010192	601.2575667545694	115.82	2.3204	115.82	114.41	116.73	0					137	72	3	0	0	0	0.89198	11	49635	49635;49693;49734;49784;49837;49902;49954;50006;50059;50112;50190		0	0	1	2966800			24593	6604	12222	12277	28317;28318;28319;28320;28321;28322;28323;28324;28325;28326;28327	28317					-0.06576112255845601
PGGHVHFE	8	Unmodified	_PGGHVHFE_					0	0	0			REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3	REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.2098876833916	2	440.209027	878.403501	0.68233	0.00030037	0.3646	0.0001605	1.0469	0.00046087	440.20921973575787	17.282	0.33264	18.18	17.991	18.323	0.89794					16	11	2	0	0	0	0.87935	1	7203	7203		9.3474	0.75416	1	338920	+		24594	9775	12223	12278	28328	28328					-0.04056497139379189
PGGHVHFE	8	Unmodified	_PGGHVHFE_					0	0	0			REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3	REV__nc|ENSG00000130299|Q969Y2-3|GTPBP3	MSMS	GG20161007_CRH_Patient100_W632_02	4	440.2091857790947	2	440.209027	878.403501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.991	1	18.293	17.793	18.793	1.3023								0	0	0	1.0178	1	7059	7059		14.582	1.0738	1		+		24595	9775	12223	12278	28329	28329					-0.04056497139379189
PGGLLGGT	8	Unmodified	_PGGLLGGT_					0	0	0			REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.1901122927666	2	336.189771	670.36499	-0.21544	-7.2428E-05	2.9229	0.00098266	2.7075	0.00091023	336.19045083945076	17.437	0.19353	18.739	18.647	18.84	1.3023					16	6	3	0	0	0	0.89178	1	7239	7239		0.69038	0	1	1138400	+		24596	9885	12224	12279	28330	28330					0.016621972261077644
PGGPSLLVA	9	Unmodified	_PGGPSLLVA_					0	0	0			REV__ENSG00000174326|ENST00000574600|SLC16A11	REV__ENSG00000174326|ENST00000574600|SLC16A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	810.4708740115166	1	810.47198	809.464704	0.51775	0.00041962	1.0556	0.00085552	1.5733	0.0012751	810.4732989382325	30.402	0.28228	32.217	32.075	32.358	1.8151					16	8	3	0	0	0	0.46905	1	12789	12789		16.942	0	1	1258900	+		24597	11119	12225	12280	28331	28331					0.05235014840047825
PGGQPRRCCFS	11	Unmodified	_PGGQPRRCCFS_					0	0	0		ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	ENSG00000101493|ENST00000443185|ZNF516	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	603.8258544802666	2	604.276592	1206.53863	2.1109	0.0012756	-3.414	-0.002063	-1.3031	-0.00078741	604.2745484617026	68.71	0.25348	70.076	69.966	70.22	1.3657					11	7	2	0	0	0	0.14606	1	28891	28891		9.3831	5.7866	1	309750			24598	1355	12226	12281	28332	28332					-0.05637708331596514
PGGYHCSQ	8	Unmodified	_PGGYHCSQ_					0	0	0		nc|ENSG00000148143|Q96JM2-2|ZNF462;nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	424.6709167361259	2	424.67142	847.328287	1.5724	0.00066774	-1.8025	-0.00076546	-0.2301	-9.7716E-05	424.6696907450616	69.991	0.28138	70.313	70.192	70.474	0.32224					13	8	2	0	0	0	0.89176	1	29298	29298		0.79363	0	1	443360			24599	7894	12227	12282	28333	28333					-0.10148422662109624
PGGYHCSQ	8	Unmodified	_PGGYHCSQ_					0	0	0		nc|ENSG00000148143|Q96JM2-2|ZNF462;nc|ENSG00000148143|Q96JM2-3|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	nc|ENSG00000148143|Q96JM2-2|ZNF462	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	424.67142	847.328287	0.74009	0.00031429	-0.06477	-2.7506E-05	0.67532	0.00028679	424.67061809294825	70.164	0.40442	70.164	69.929	70.333	0	-0.074351	0.00044987	NaN	0.79363	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	650020			24600	7894	12227	12282							-0.10148422662109624
PGHFILLLWV	10	Unmodified	_PGHFILLLWV_					0	0	0			REV__nc|ENSG00000290203|Q96PH1-5|NOX5	REV__nc|ENSG00000290203|Q96PH1-5|NOX5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8578369021416	2	597.855327	1193.6961	2.5642	0.001533	2.2485	0.0013442	4.8126	0.0028772	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.84024	3	32019	32019;32065;32115		7.9102	5.6074	1	10594000	+		24601	11970	12228	12283	28334;28335;28336	28334					0.10700062541741318
PGHFILLLWV	10	Unmodified	_PGHFILLLWV_					0	0	0			REV__nc|ENSG00000290203|Q96PH1-5|NOX5	REV__nc|ENSG00000290203|Q96PH1-5|NOX5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8578369021416	2	597.855327	1193.6961	2.7426	0.0016397	1.429	0.00085433	4.1716	0.002494	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.84024	1	31801	31801		7.9102	3.1541	1	9838100	+		24602	11970	12228	12283	28337	28337					0.10700062541741318
PGILFFFTF	9	Unmodified	_PGILFFFTF_					0	0	0			REV__ENST00000264025.7_1_11:119534775-119534964:-|nuORF	REV__ENST00000264025.7_1_11:119534775-119534964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2997314333916	2	544.794404	1087.57425	2.2729	0.0012383	-2.6111	-0.0014225	-0.33817	-0.00018424	544.7925886639472	47.439	0.5133	48.822	48.504	49.017	1.3825					52	15	4	0	0	0	0.54523	1	19788	19788		13.508	2.684	1	6741200	+		24603	12209	12229	12284	28338	28338					0.03397020459374289
PGIPMTKTCV	10	Unmodified	_PGIPMTKTCV_					0	0	0			REV__ENST00000533841.1_1_15:45709932-45713405:+|nuORF	REV__ENST00000533841.1_1_15:45709932-45713405:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	523.2750732302666	2	523.772288	1045.53002	2.1605	0.0011316	1.3558	0.00071015	3.5164	0.0018418	524.2728932588403	52.207	1.1561	52.207	51.977	53.133	0					58	36	2	0	0	0	0.12412	1	21706	21706		14.838	5.4908	1	648840	+		24604	11042	12230	12285	28339	28339					0.009079249792193878
PGKAALAL	8	Unmodified	_PGKAALAL_					0	0	0			REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	REV__PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	370.7361633181572	2	370.736889	739.459225	-0.38267	-0.00014187	-2.125	-0.00078783	-2.5077	-0.0009297	370.73617738786766	63.817	1.7041	63.817	63.492	65.197	0					127	53	5	0	0	0	0.89051	1	26583	26583		2.3027	0	1	286640000	+		24605	11959	12231	12286	28340	28340					0.07907336048208435
PGKAGRRG	8	Unmodified	_PGKAGRRG_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7391235232353	2	399.738286	797.462019	1.6287	0.00065104	0.060306	2.4107E-05	1.689	0.00067515	399.738323106627	68.505	0.52837	68.827	68.597	69.125	0.32223					46	16	4	0	0	0	0.89051	1	28756	28756		2.3027	0	1	17374000			24606	5128	12232	12287	28341	28341					0.055186042257560075
PGKAGRRG	8	Unmodified	_PGKAGRRG_					0	0	0		nc|ENSG00000204248|P13942-8|COL11A2;nc|ENSG00000204248|P13942-6|COL11A2;nc|ENSG00000204248|P13942-7|COL11A2;nc|ENSG00000204248|P13942-4|COL11A2;nc|ENSG00000204248|P13942-5|COL11A2;nc|ENSG00000204248|P13942-2|COL11A2;nc|ENSG00000204248|P13942-3|COL11A2;nc|ENSG00000204248|P13942|COL11A2;ENSG00000204248|ENST00000341947|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	nc|ENSG00000204248|P13942-8|COL11A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7391845583916	2	399.738286	797.462019	1.427	0.00057042	0.57713	0.0002307	2.0041	0.00080112	399.738569423991	67.583	0.5775	68.961	68.665	69.242	1.3778					46	18	4	0	0	0	0.89051	2	28304	28304;28394		2.3027	0	1	11716000			24607	5128	12232	12287	28342;28343	28342					0.055186042257560075
PGKAPKKPVP	10	Unmodified	_PGKAPKKPVP_					0	0	0			REV__nc|ENSG00000170579|O14490-5|DLGAP1	REV__nc|ENSG00000170579|O14490-5|DLGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8235656619072	2	509.824027	1017.6335	2.8274	0.0014415	-3.1962	-0.0016295	-0.36876	-0.000188	509.8221089010055	91.602	0.451	91.792	91.498	91.949	0.19042					33	13	3	0	0	0	0.89803	2	38349	38349;38389		0.40072	0.40072	1	2573500	+		24608	10990	12233	12288	28344;28345	28344					0.12538916473556583
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7469055056572	2	412.746111	823.477669	0.99881	0.00041225	-0.73666	-0.00030405	0.26215	0.0001082	412.746399867508	62.229	0.31293	62.229	62.086	62.399	0					19	9	3	0	0	0	0.89051	1	25947	25947		2.3027	0	1	1610200	+		24609	9392	12234	12289	28346	28346					0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7472717165947	2	412.746111	823.477669	2.1349	0.00088115	-0.12897	-5.3231E-05	2.0059	0.00082792	412.7460805886285	65.68	0.7603	66.007	65.578	66.338	0.32688					56	23	4	0	0	0	0.89051	4	27454	27454;27502;27541;27586		2.3027	0	1	20722000	+		24610	9392	12234	12289	28347;28348;28349;28350	28347					0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7470886111259	2	412.746111	823.477669	2.8999	0.0011969	-0.46406	-0.00019154	2.4358	0.0010054	412.74596023226263	64.702	0.5861	66.109	65.77	66.356	1.4071					47	18	4	0	0	0	0.89051	3	27083	27083;27132;27186		2.3027	0	1	13595000	+		24611	9392	12234	12289	28351;28352;28353	28351					0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.7471496462822	2	412.746111	823.477669	2.3266	0.00096028	-0.02711	-1.1189E-05	2.2994	0.00094909	412.7461372822758	64.32	0.56786	66.248	65.919	66.487	1.928					48	17	4	0	0	0	0.89051	1	27025	27025		2.3027	0	1	15040000	+		24612	9392	12234	12289	28354	28354					0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.746111	823.477669	0.99881	0.00041225	-0.73666	-0.00030405	0.26215	0.0001082	412.746399867508	62.229	0.31293	62.229	62.086	62.399	0	-0.16037	-0.00076446	NaN	2.3027	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1610200	+		24613	9392	12234	12289							0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.746111	823.477669	2.1362	0.00088169	0.0042341	1.7476E-06	2.1404	0.00088344	412.7463290213709	62.071	0.43883	62.401	62.165	62.604	0.32974	0.012015	-0.00015286	NaN	2.3027	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	916750	+		24614	9392	12234	12289							0.058868907427950035
PGKGPGRR	8	Unmodified	_PGKGPGRR_					0	0	0			REV__ENSG00000113905|ENST00000232003|HRG	REV__ENSG00000113905|ENST00000232003|HRG	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	412.746111	823.477669	2.9047	0.0011989	1.5823	0.0006531	4.4871	0.001852	412.7468962331296	61.118	0.43197	62.537	62.314	62.746	1.4196	0.14835	0.0011499	NaN	2.3027	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	925810	+		24615	9392	12234	12289							0.058868907427950035
PGKHRKRIG	9	Unmodified	_PGKHRKRIG_					0	0	0			REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.8282958865166	2	524.827966	1047.64138	2.5131	0.0013189	-1.5627	-0.00082015	0.95038	0.00049878	524.8272676027741	83.98	0.93058	83.98	83.627	84.558	0					87	29	5	0	0	0	0.85019	3	34972	34972;35024;35063		0.52476	0.52476	1	213410000	+		24616	13512	12235	12290	28355;28356;28357	28355					0.11946488513672193
PGKHRKRIG	9	Unmodified	_PGKHRKRIG_					0	0	0			REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.8284789919853	2	524.827966	1047.64138	2.5784	0.0013532	-1.0448	-0.00054832	1.5337	0.00080491	524.8275227110491	83.791	1.0292	84.061	83.739	84.768	0.27029					94	32	5	0	0	0	0.85019	2	35046	35046;35085		0.52476	0.52476	1	209110000	+		24617	13512	12235	12290	28358;28359	28358					0.11946488513672193
PGKHRKRIG	9	Unmodified	_PGKHRKRIG_					0	0	0			REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	REV__ENST00000502875.1_1_4:141563595-141563988:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.8289672732353	2	524.827966	1047.64138	2.7901	0.0014643	-0.85865	-0.00045064	1.9315	0.0010137	524.8275843120056	82.998	0.68253	84.211	83.889	84.572	1.2125					76	21	5	0	0	0	0.85019	1	34840	34840		0.52476	0.52476	1	80288000	+		24618	13512	12235	12290	28360	28360					0.11946488513672193
PGKILFRRSHI	11	Unmodified	_PGKILFRRSHI_					0	0	0		SH3PXD2A-RB1|1|fusion;ENSG00000174705|ENST00000311601|SH3PXD2B;nc|ENSG00000107957|Q5TCZ1-3|SH3PXD2A;ENSG00000107957|ENST00000369774|SH3PXD2A	SH3PXD2A-RB1|1|fusion	SH3PXD2A-RB1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2075073122978	4	331.705657	1322.79352	1.1785	0.00039091	1.489	0.00049393	2.6675	0.00088483	332.2068400206555	46.01	1.7584	46.339	45.724	47.482	0.32899					138	58	3	0	0	0	1.0357	1	19382	19382		1.4551	0.12547	1	5569000			24619	1616	12236	12291	28361	28361					0.1450384447059605
PGKKIETRRGP	11	Unmodified	_PGKKIETRRGP_					0	0	0			REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8708373904228	2	619.870028	1237.7255	2.1274	0.0013187	-1.3015	-0.00080677	0.8259	0.00051195	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	1.039	1	31990	31990		0.30703	0	1	3039400	+		24620	12663	12237	12292	28362	28362					0.11614974819917734
PGKKIETRRGP	11	Unmodified	_PGKKIETRRGP_					0	0	0			REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8714477419853	2	619.870028	1237.7255	1.988	0.0012323	-0.64516	-0.00039991	1.3428	0.00083239	619.8693389903442	77.066	1.4438	77.383	76.506	77.95	0.31653					106	45	3	0	0	0	1.039	1	32015	32015		0.30703	0	1	3462500	+		24621	12663	12237	12292	28363	28363					0.11614974819917734
PGKKIETRRGP	11	Unmodified	_PGKKIETRRGP_					0	0	0			REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	REV__ENST00000370620.5_1_X:135750233-135750308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8702270388603	2	619.870028	1237.7255	1.6732	0.0010372	-0.23431	-0.00014524	1.4389	0.00089193	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	1.039	5	33518	33518;33620;33725;33783;33847		0.30703	0.30703	1	8897800	+		24622	12663	12237	12292	28364;28365;28366;28367;28368	28364					0.11614974819917734
PGKKKLFAR	9	Unmodified	_PGKKKLFAR_					0	0	0			REV__nc|ENSG00000142655|O75381-2|PEX14	REV__nc|ENSG00000142655|O75381-2|PEX14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.3845092654228	2	522.837468	1043.66038	3.1965	0.0016713	0.50532	0.0002642	3.7019	0.0019355	522.8381428289595	107.07	0.12555	107.24	107.15	107.27	0.16174					9	5	2	0	0	0	0.11916	1	45892	45892		1.8442	1.8442	1	3981500	+		24623	14450	12238	12293	28369	28369					0.1403002508473037
PGKKNRKRKLQ	11	Unmodified	_PGKKNRKRKLQ_					0	0	0		L1MDa_dup2778|chr7:47340719-47342131:-|2.305162096757514|0.4082244758708406|2.5|429.0|13|1|sense	L1MDa_dup2778|chr7:47340719-47342131:-|2.305162096757514|0.4082244758708406|2.5|429.0|13|1|sense	L1MDa_dup2778|chr7:47340719-47342131:-|2.305162096757514|0.4082244758708406|2.5|429.0|13|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.9697753787041	4	338.970385	1351.85244	-0.58807	-0.00019934	-0.42419	-0.00014379	-1.0123	-0.00034313	338.97054425648236	31.706	0.77863	32.987	32.501	33.28	1.2813					71	25	5	0	0	0	1.0388	1	13276	13276		0.50596	0.051438	1	7235700			24624	7709	12239	12294	28370	28370					0.19058320764929704
PGKLALAA	8	Unmodified	_PGKLALAA_					0	0	0			REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	REV__ENST00000357802.6_1_22:42970741-42976277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	370.7359802126884	2	370.736889	739.459225	-0.38267	-0.00014187	-2.125	-0.00078783	-2.5077	-0.0009297	370.73617738786766	63.817	1.7041	63.817	63.492	65.197	0					127	53	5	0	0	0	0.89178	1	26635	26635		0.69038	0	1	286640000	+		24625	11609	12240	12295	28371	28371					0.07907336048208435
PGKLKVFL	8	Unmodified	_PGKLKVFL_					0	0	0		MER72B_dup8|chr1:206066627-206067269:-|3.5601120063877|0.1593671915957709|4.48|421.0|39|2|anti-sense	MER72B_dup8|chr1:206066627-206067269:-|3.5601120063877|0.1593671915957709|4.48|421.0|39|2|anti-sense	MER72B_dup8|chr1:206066627-206067269:-|3.5601120063877|0.1593671915957709|4.48|421.0|39|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2015258669853	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.744	1	96.849	96.349	97.349	0.105								0	0	0	1.0178	1	40485	40485		0.40072	0	1				24626	7797	12241	12296	28372	28372					0.12540744041837115
PGKLPIQLQ	9	Unmodified	_PGKLPIQLQ_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6;ENST00000557781.5_1_12:57498159-57499088:-|nuORF	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.3128845095634	2	497.30821	992.601866	2.9906	0.0014873	3.1504	0.0015667	6.141	0.003054	497.309867465038	75.888	1.1427	76.21	75.519	76.662	0.32163					94	36	4	0	0	0	0.85019	1	31580	31580		0.52476	0	1	6966500			24627	3930	12242	12297	28373	28373					0.10526923719623937
PGKLRVRHQ	9	Unmodified	_PGKLRVRHQ_					0	0	0		ENST00000462977.1_1_1:161139323-161139551:+|nuORF	ENST00000462977.1_1_1:161139323-161139551:+|nuORF	ENST00000462977.1_1_1:161139323-161139551:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8346435427666	2	545.833249	1089.65194	1.9974	0.0010903	-0.10135	-5.5322E-05	1.8961	0.0010349	545.8330286702136	83.397	0.83265	83.397	82.984	83.816	0					44	26	2	0	0	0	0.85019	1	34773	34773		0.52476	0	1	1545300			24628	6681	12243	12298	28374	28374					0.11070471168113727
PGKRATRG	8	Unmodified	_PGKRATRG_					0	0	0			REV__ENST00000457484.6_1_7:1624903-1627631:+|nuORF	REV__ENST00000457484.6_1_7:1624903-1627631:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7515136599541	2	421.751393	841.488233	1.5474	0.00065261	-0.62271	-0.00026263	0.92466	0.00038998	421.75102016023567	70.474	0.5493	72.312	72.041	72.591	1.8378					41	17	3	0	0	0	0.89178	1	29564	29564		0.69038	0	1	10593000	+		24629	13170	12244	12299	28375	28375					0.06114873397223164
PGKREPLRSVL	11	Unmodified	_PGKREPLRSVL_					0	0	0		ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	ENSG00000182170|ENST00000332314|MRGPRG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9232360720634	3	417.922578	1250.7459	0.776	0.00032431	1.0605	0.0004432	1.8365	0.00076751	417.9228162406104	94.386	0.49126	94.386	94.149	94.641	0					58	15	5	0	0	0	1.039	1	39445	39445		0.45452	0.31463	1	20723000			24630	4602	12245	12300	28376	28376					0.1305614547973164
PGKRGRPG	8	Unmodified	_PGKRGRPG_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	824.4866821169853	1	824.484945	823.477669	1.7747	0.0014632	0.78336	0.00064587	2.5581	0.0021091	824.4853704102071	65.913	0.35	65.913	65.708	66.058	0					24	10	3	0	0	0	0.89178	1	27422	27422		0.69038	0	1	2394100			24631	747	12246	12301	28377	28377					0.05886890742806372
PGKRGRPG	8	Unmodified	_PGKRGRPG_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	824.484945	823.477669	1.9455	0.001604	0.32608	0.00026885	2.2716	0.0018729	824.4852036518492	65.684	0.4408	66.011	65.801	66.242	0.32688	-0.052277	-0.00019268	NaN	0.69038	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2263800			24632	747	12246	12301							0.05886890742806372
PGKRGRPG	8	Unmodified	_PGKRGRPG_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	824.484945	823.477669	2.8108	0.0023175	0.11967	9.8667E-05	2.9305	0.0024161	824.4847480628101	64.665	0.33987	66.072	65.923	66.263	1.4071	0.0088014	-0.00036287	NaN	0.69038	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1325100			24633	747	12246	12301							0.05886890742806372
PGKRGRPG	8	Unmodified	_PGKRGRPG_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	824.484945	823.477669	2.1214	0.001749	1.0959	0.00090352	3.2172	0.0026526	824.4851628943894	64.328	0.37717	66.256	66.045	66.422	1.928	0.19295	0.00044199	NaN	0.69038	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1308600			24634	747	12246	12301							0.05886890742806372
PGKRLQSKLH	10	Unmodified	_PGKRLQSKLH_					0	0	0			REV__ENSG00000151461|ENST00000357604|UPF2	REV__ENSG00000151461|ENST00000357604|UPF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3547851443291	2	582.354014	1162.69348	2.2724	0.0013233	-0.55344	-0.0003223	1.7189	0.001001	582.3535400939439	90.486	0.58612	90.486	90.193	90.779	0					67	18	5	0	0	0	0.89803	1	37794	37794		0.40072	0.093686	1	57051000	+		24635	10401	12247	12302	28378	28378					0.1186360713677459
PGKRLQSKLH	10	Unmodified	_PGKRLQSKLH_					0	0	0			REV__ENSG00000151461|ENST00000357604|UPF2	REV__ENSG00000151461|ENST00000357604|UPF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.3548461794853	2	582.354014	1162.69348	2.522	0.0014687	-0.86677	-0.00050477	1.6553	0.00096395	582.3533509333483	90.331	0.65714	90.541	90.242	90.9	0.20904					75	20	5	0	0	0	0.89803	2	37828	37828;37878		0.40072	0	1	43975000	+		24636	10401	12247	12302	28379;28380	28379					0.1186360713677459
PGKRWKRK	8	Unmodified	_PGKRWKRK_					0	0	0		HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3331786990166	2	528.332885	1054.65122	1.3251	0.00070012	1.2434	0.00065696	2.5686	0.0013571	528.3337019076237	101.94	0.12274	101.94	101.86	101.98	0					8	3	3	0	0	0	0.89178	1	42699	42699		0.69038	0.088878	1	2062100			24637	7649	12248	12303	28381	28381					0.12607676519064626
PGKRWKRK	8	Unmodified	_PGKRWKRK_					0	0	0		HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	HMGB3|p.V157Efs*68|1|0.04|ENSG00000029993|chrX:150987780-150987781|-/AAAAGATACTTAAAAGATGGCAATACCTC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	528.332885	1054.65122	2.8977	0.001531	0.38226	0.00020196	3.28	0.0017329	528.33305701974	101.93	0.12025	101.99	101.92	102.04	0.062805	0.026704	-0.00048154	NaN	0.69038	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1687000			24638	7649	12248	12303							0.12607676519064626
PGKVKIQKLL	10	Unmodified	_PGKVKIQKLL_					0	0	0			REV__ENST00000454465.1_1_2:87398353-87423749:+|nuORF	REV__ENST00000454465.1_1_2:87398353-87423749:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3815795779228	2	562.381709	1122.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.344	1	69.666	69.166	70.166	0.32224								0	0	0	0.6624	1	29025	29025		0.40072	0	1		+		24639	10443	12249	12304	28382	28382					0.1924002060454768
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5113403201103	3	382.178536	1143.51378	-1.6015	-0.00061206	1.8933	0.00072358	0.2918	0.00011152	382.17941726467143	2.3504	0.59643	2.3504	2.0994	2.6958	0					34	24	2	0	0	0	0.1082	1	873	873		13.042	5.5654	1	315260	+		24640	8080	12250	12305	28383	28383					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5111877322197	3	382.178536	1143.51378	-1.6023	-0.00061235	1.6152	0.00061731	0.012981	4.9612E-06	382.1792025278459	4.384	0.31392	4.384	4.2062	4.5201	0					23	13	2	0	0	0	0.11492	1	1782	1782		8.7454	0	1	412710	+		24641	8080	12250	12305	28384	28384					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	381.5125915408134	3	382.178536	1143.51378	-0.91011	-0.00034783	3.5438	0.0013544	2.6337	0.0010065	382.18013105214305	27.011	0.63598	27.011	26.564	27.2	0					34	20	2	0	0	0	0.11216	1	11317	11317		7.609	2.2062	1	561470	+		24642	8080	12250	12305	28385	28385					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5103637576103	3	382.178536	1143.51378	0.060232	2.3019E-05	-0.95423	-0.00036469	-0.894	-0.00034167	382.17838217599905	6.1722	0.11638	6.2521	6.1647	6.2811	0.079923					9	6	2	0	0	0	0.11492	1	2553	2553		13.042	4.2971	1	127170	+		24643	8080	12250	12305	28386	28386					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5110046267509	3	382.178536	1143.51378	0.20125	7.6912E-05	0.017131	6.5472E-06	0.21838	8.346E-05	382.1787928611179	14.334	0.87374	14.447	13.947	14.821	0.11295					43	27	2	0	0	0	0.1082	1	6010	6010		5.2969	0.58097	1	687910	+		24644	8080	12250	12305	28387	28387					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5108825564384	3	382.178536	1143.51378	0.13651	5.217E-05	0.3651	0.00013953	0.50161	0.0001917	382.1786925045773	12.422	2.0264	12.511	11.897	13.924	0.089381					87	64	2	0	0	0	0.1082	1	5621	5621		8.7454	1.2683	1	811230	+		24645	8080	12250	12305	28388	28388					-0.052236968710076326
PGLFWDSWH	9	Unmodified	_PGLFWDSWH_					0	0	0			REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	REV__ADAMTS16|p.S593Ffs*40|1|0.07|ENSG00000145536|chr5:5232444-5232444|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5107910037041	3	382.178536	1143.51378	-0.88485	-0.00033817	0.976	0.00037301	0.091147	3.4835E-05	382.1790672893708	12.456	2.0839	13.15	12.511	14.595	0.69396					82	66	2	0	0	0	0.11492	1	5488	5488		5.2969	2.6656	1	457320	+		24646	8080	12250	12305	28389	28389					-0.052236968710076326
PGLGPSVIA	9	Unmodified	_PGLGPSVIA_					0	0	0			REV__ENST00000011653.8_1_12:6928519-6928660:+|nuORF	REV__ENST00000011653.8_1_12:6928519-6928660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	810.4731323122978	1	810.47198	809.464704	0.51775	0.00041962	1.0556	0.00085552	1.5733	0.0012751	810.4732989382325	30.402	0.28228	32.217	32.075	32.358	1.8151					16	8	3	0	0	0	0.10722	1	12736	12736		46.921	4.8263	1	1258900	+		24647	12038	12251	12306	28390	28390					0.05235014840036456
PGLIFPSLLPR	11	Unmodified	_PGLIFPSLLPR_					0	0	0		ENSG00000204590|ENST00000376621|GNL1;nc|ENSG00000204590|P36915-2|GNL1;ENST00000462708.1_1_6:30514431-30520307:-|nuORF	ENSG00000204590|ENST00000376621|GNL1	ENSG00000204590|ENST00000376621|GNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1894103884697	4	303.189309	1208.72813	-0.14322	-4.3423E-05	1.3569	0.00041141	1.2137	0.00036799	303.18921327321283	27.224	0.638	28.496	28.321	28.959	1.2715					66	20	4	0	0	0	1.0365	1	11407	11407		1.2148	0.4383	1	2612000			24648	5150	12252	12307	28391	28391					0.13211430224873766
PGLSGHKQ	8	Unmodified	_PGLSGHKQ_					0	0	0		ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2267333865166	2	412.224677	822.434801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.221	1	23.837	23.337	24.337	1.6158								0	0	0	1.0178	1	9270	9270		2.3027	0	1				24649	4898	12253	12308	28392	28392					0.01648075894718204
PGLSGHKQ	8	Unmodified	_PGLSGHKQ_					0	0	0		ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2264282107353	2	412.224677	822.434801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.408	1	24.023	23.523	24.523	1.6158								0	0	0	1.0178	1	9351	9351		2.3027	0	1				24650	4898	12253	12308	28393	28393					0.01648075894718204
PGLSGHKQ	8	Unmodified	_PGLSGHKQ_					0	0	0		ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	ENSG00000189167|ENST00000533490|ZAR1L	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2258788943291	2	412.224677	822.434801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.527	1	24.143	23.643	24.643	1.6158								0	0	0	1.0178	1	9401	9401		2.3027	0	1				24651	4898	12253	12308	28394	28394					0.01648075894718204
PGLTFHLIF	9	Unmodified	_PGLTFHLIF_					0	0	0		ENST00000556493.1_1_14:102290168-102290477:+|nuORF	ENST00000556493.1_1_14:102290168-102290477:+|nuORF	ENST00000556493.1_1_14:102290168-102290477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7988159060478	2	522.797478	1043.5804	2.692	0.0014074	-0.041461	-2.1676E-05	2.6506	0.0013857	522.7973327711823	75.581	0.75594	77.362	77.103	77.859	1.7817					62	24	3	0	0	0	0.069258	1	31763	31763		60.39	0	1	10217000			24652	7305	12254	12309	28395	28395					0.060355386908895525
PGMINRAV	8	Unmodified	_PGMINRAV_					0	0	0		ENST00000398117.1_1_18:60794470-60795067:-|nuORF	ENST00000398117.1_1_18:60794470-60795067:-|nuORF	ENST00000398117.1_1_18:60794470-60795067:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2368652224541	2	429.23673	856.458907	1.2181	0.00052284	-0.51056	-0.00021915	0.7075	0.00030368	429.236401501721	54.159	0.85167	54.159	53.712	54.563	0					70	27	3	0	0	0	0.88587	1	22581	22581		5.2307	0	1	11857000			24653	6320	12255	12310	28396	28396					0.02493593056726695
PGNKLGGI	8	Unmodified	_PGNKLGGI_					0	0	0		tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2253295779228	2	378.224146	754.433738	-0.92837	-0.00035113	3.4595	0.0013085	2.5311	0.00095732	378.2254435324271	107.8	0.1925	107.8	107.7	107.89	0					24	10	3	0	0	0	0.89198	1	46294	46294		0	0	1	88104000			24654	16352	12256	12311	28397	28397					0.04669861525826491
PGNKLGGI	8	Unmodified	_PGNKLGGI_					0	0	0		tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	755.4427978396416	1	755.441015	754.433738	1.3473	0.0010178	1.1519	0.0008702	2.4992	0.001888	755.4418922527309	107.8	0.15793	107.8	107.72	107.88	0					18	8	3	0	0	0	0.89198	1	46323	46323		0	0	1	28913000			24655	16352	12256	12311	28398	28398					0.04669861525826491
PGNKLGGI	8	Unmodified	_PGNKLGGI_					0	0	0		tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	tr|A0A553SLT0|A0A553SLT0_NIACIAltronatedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_21265PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	378.3396789431572	2	378.224146	754.433738	2.9669	0.0011222	1.4009	0.00052986	4.3679	0.001652	378.22435631090553	106.12	0.088058	106.28	106.24	106.33	0.16174					6	4	2	0	0	0	2.3239	1	45324	45324		0	0	1	2861100			24656	16352	12256	12311	28399	28399					0.04669861525826491
PGPAALRRAPQ	11	Unmodified	_PGPAALRRAPQ_					0	0	0		ENST00000476291.1_1_13:114550749-114566917:-|nuORF;ENSG00000183087|ENST00000327773|GAS6;nc|ENSG00000183087|Q14393-1|GAS6	ENST00000476291.1_1_13:114550749-114566917:-|nuORF	ENST00000476291.1_1_13:114550749-114566917:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3307983279228	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	1.0362	1	31326	31326		1.3295	1.3295	1	6327800			24657	4639	12257	12312	28400	28400					0.08550747585650242
PGPAGAPS	8	Unmodified	_PGPAGAPS_					0	0	0		ENST00000393760.5_1_10:99205993-99206050:+|nuORF;ENSG00000135925|ENST00000258411|WNT10A	ENST00000393760.5_1_10:99205993-99206050:+|nuORF	ENST00000393760.5_1_10:99205993-99206050:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	653.3247558474541	1	653.325316	652.31804	0.13933	9.1031E-05	0.49762	0.00032511	0.63695	0.00041614	653.3255000467713	16.816	0.34007	17.714	17.565	17.905	0.89794					20	11	2	0	0	0	0.89008	1	7028	7028		2.5775	0	1	1539800			24658	2693	12258	12313	28401	28401					-0.022026623250440025
PGPPAGRR	8	Unmodified	_PGPPAGRR_					0	0	0		ENSG00000160408|ENST00000373146|ST6GALNAC6;nc|ENSG00000257524|Q969X2-3|ST6GALNAC6	ENSG00000160408|ENST00000373146|ST6GALNAC6	ENSG00000160408|ENST00000373146|ST6GALNAC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.2336303591728	2	404.232836	806.45112	2.0582	0.000832	-0.0261	-1.0551E-05	2.0321	0.00082145	404.2325978132258	65.773	1.1743	66.1	65.323	66.497	0.32689					66	36	4	0	0	0	0.89008	1	27478	27478		2.5775	0	1	10886000			24659	3557	12259	12314	28402	28402					0.04015201851461825
PGPPGKLA	8	Unmodified	_PGPPGKLA_					0	0	0			REV__ENSG00000050767|ENST00000390654|COL23A1	REV__ENSG00000050767|ENST00000390654|COL23A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	368.7205078005791	2	368.721239	735.427924	-0.44227	-0.00016308	-0.74995	-0.00027652	-1.1922	-0.0004396	368.72088612614806	58.8	0.7055	58.8	58.331	59.037	0					45	21	4	0	0	0	0.89176	2	24473	24473;24512		0.79363	0	1	8354600	+		24660	8622	12260	12315	28403;28404	28403					0.04962763014123084
PGPPGKLA	8	Unmodified	_PGPPGKLA_					0	0	0			REV__ENSG00000050767|ENST00000390654|COL23A1	REV__ENSG00000050767|ENST00000390654|COL23A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	368.7203246951103	2	368.721239	735.427924	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.563	1	58.978	58.478	59.478	1.4145								0	0	0	1.0178	1	24133	24133		0.79363	0	1		+		24661	8622	12260	12315	28405	28405					0.04962763014123084
PGPSIPAVLG	10	Unmodified	_PGPSIPAVLG_					0	0	0			REV__MAP2|p.S707Ifs*11|1|0.05|ENSG00000078018|chr2:209694288-209694289|-/A|frameshift_variant	REV__MAP2|p.S707Ifs*11|1|0.05|ENSG00000078018|chr2:209694288-209694289|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1819946169853	3	303.179766	906.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.94	1	101.15	100.65	101.65	0.20527								0	0	0	0.66254	1	42441	42441		0.15932	0	1		+		24662	8783	12261	12316	28406	28406					0.060469729028682195
PGPVLGMEFV	10	Unmodified	_PGPVLGMEFV_					0	0	0			REV__ENST00000592087.1_1_19:36980552-36981209:+|nuORF	REV__ENST00000592087.1_1_19:36980552-36981209:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2740356326103	2	523.272978	1044.5314	2.1798	0.0011406	-2.6988	-0.0014122	-0.51899	-0.00027158	523.272897159339	51.724	1.7512	51.724	51.354	53.106	0					109	55	4	0	0	0	0.80568	1	21637	21637		11.64	0.81637	1	1257200	+		24663	14074	12262	12317	28407	28407					0.01091882339642325
PGRGGAGV	8	Unmodified	_PGRGGAGV_					0	0	0		ENST00000530142.5_1_8:145581690-145582740:-|nuORF	ENST00000530142.5_1_8:145581690-145582740:-|nuORF	ENST00000530142.5_1_8:145581690-145582740:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	670.3665038943291	1	670.363099	669.355822	3.1875	0.0021368	-1.7845	-0.0011963	1.4029	0.00094047	670.3619051622724	99.285	0.2485	99.483	99.406	99.654	0.19767					13	7	2	0	0	0	0.89051	1	41853	41853		2.3027	0	1	10063000			24664	7160	12263	12318	28408	28408					0.007918486604353348
PGRGREIPKV	10	Unmodified	_PGRGREIPKV_					0	0	0		ENST00000553646.1_1_14:75375979-75376912:-|nuORF;ENST00000555834.5_1_14:75375979-75389943:-|nuORF	ENST00000553646.1_1_14:75375979-75376912:-|nuORF	ENST00000553646.1_1_14:75375979-75376912:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	370.2260925173759	3	370.224368	1107.65128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.93	1	103.99	103.49	104.49	0.059502								0	0	0	0.66222	1	43726	43726		0.69767	0	1				24665	7281	12264	12319	28409	28409					0.10175631728407097
PGRKRRRRRRK	11	Unmodified	_PGRKRRRRRRK_					0	0	0		nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	nc|ENSG00000135272|Q9P1T7-1|MDFIC	MSMS	GG20161007_CRH_Patient100_A02_02	2	761.4965698122978	2	761.498524	1520.9825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.211	1	95.335	94.835	95.835	0.12331								0	0	0	0.63775	1	39842	39842		0	0	1				24666	7875	12265	12320	28410	28410					0.24284354607243586
PGRPGRQSD	9	Unmodified	_PGRPGRQSD_					0	0	0			REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	969.4852783083916	1	969.486067	968.478791	1.1874	0.0011512	-0.39197	-0.00038	0.79542	0.00077115	969.4845141681756	103.94	0.077515	103.94	103.9	103.97	0					5	3	2	0	0	0	0.11776	1	43776	43776		6.2058	0.47393	1	24184000	+		24667	14629	12266	12321	28411	28411					-0.0067093967895743845
PGRPGRQSD	9	Unmodified	_PGRPGRQSD_					0	0	0			REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	969.4852172732353	1	969.486067	968.478791	2.7678	0.0026834	-1.7526	-0.0016991	1.0153	0.0009843	969.4830146665215	103.86	0.076233	104.02	103.97	104.05	0.16055					6	3	2	0	0	0	0.72823	1	43894	43894		6.2058	0.47393	1	12677000	+		24668	14629	12266	12321	28412	28412					-0.0067093967895743845
PGRPGRQSD	9	Unmodified	_PGRPGRQSD_					0	0	0			REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	969.486067	968.478791	2.7647	0.0026803	-1.7076	-0.0016555	1.0571	0.0010249	969.4846843221648	103.9	0.074722	103.96	103.92	103.99	0.059502	-0.016662	-0.00033581	NaN	6.2058	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14987000	+		24669	14629	12266	12321							-0.0067093967895743845
PGRPGRQSD	9	Unmodified	_PGRPGRQSD_					0	0	0			REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	969.486067	968.478791	2.7678	0.0026834	-1.7526	-0.0016991	1.0153	0.0009843	969.4830146665215	103.86	0.076233	104.02	103.97	104.05	0.16055	0.038703	-0.00037943	NaN	6.2058	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12677000	+		24670	14629	12266	12321							-0.0067093967895743845
PGRPGRQSD	9	Unmodified	_PGRPGRQSD_					0	0	0			REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	REV__SMR3B|p.E21D|1|0.15|ENSG00000171201|chr4:70389671-70389671|G/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	969.486067	968.478791	3.0887	0.0029944	-1.7586	-0.0017049	1.3301	0.0012895	969.4833210415219	103.82	0.078964	104	103.95	104.03	0.1731	0.01543	-0.00038526	NaN	6.2058	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16737000	+		24671	14629	12266	12321							-0.0067093967895743845
PGSCGGRG	8	Unmodified	_PGSCGGRG_					0	0	0		ENST00000405785.5_1_7:7606553-7607680:+|nuORF	ENST00000405785.5_1_7:7606553-7607680:+|nuORF	ENST00000405785.5_1_7:7606553-7607680:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.6504394412041	2	345.65303	689.291507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4152	1	3.4152	2.9152	3.9152	0								0	0	0	1.0178	1	1402	1402		0.6015	0	1				24672	6362	12267	12322	28413	28413					-0.06556674488035696
PGSEEAEER	9	Unmodified	_PGSEEAEER_					0	0	0			REV__ENSG00000115468|ENST00000264059|EFHD1	REV__ENSG00000115468|ENST00000264059|EFHD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2211486697197	2	502.219985	1002.42542	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.349	1	53.349	52.849	53.849	0								0	0	0	0.42693	1	22247	22247		3.2813	0	1		+		24673	9440	12268	12323	28414	28414					-0.07569781972131295
PGSRGPCF	8	Unmodified	_PGSRGPCF_					0	0	0		nc|ENSG00000124615|Q9NZB8-6|MOCS1;nc|ENSG00000124615|Q9NZB8-8|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	nc|ENSG00000124615|Q9NZB8-6|MOCS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.6925536990166	2	410.692155	819.369758	1.8225	0.00074849	-1.5757	-0.00064714	0.24677	0.00010135	410.6911002239902	66.044	0.57721	67.443	67.152	67.73	1.3989					45	18	3	0	0	0	0.89176	1	27761	27761		0.79363	0	1	7889700			24674	7863	12269	12324	28415	28415					-0.047152419028066106
PGSWWDQEL	9	Unmodified	_PGSWWDQEL_					0	0	0		ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	ENSG00000105675|ENST00000262623|ATP4A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2549926638603	2	559.251089	1116.48762	1.665	0.00093115	2.7514	0.0015387	4.4164	0.0024699	559.2528310702836	82.57	0.36893	82.57	82.4	82.769	0					34	11	4	0	0	0	0.82604	1	34475	34475		2.3027	0	1	3233800			24675	1533	12270	12325	28416	28416					-0.06596010833141008
PGVRSYGRRNP	11	Unmodified	_PGVRSYGRRNP_					0	0	0		ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	629.8427612185478	2	629.841802	1257.66905	2.8677	0.0018062	-0.36369	-0.00022907	2.504	0.0015771	630.3443072178299	87.774	0.23652	87.774	87.611	87.847	0					12	7	2	0	0	0	1.0031	1	36699	36699		3.5965	0	1	799970			24676	2421	12271	12326	28417	28417					0.050523469832796764
PGVVLLITPRK	11	Unmodified	_PGVVLLITPRK_					0	0	0			REV__nc|ENSG00000148339|Q6KCM7-4|SLC25A25	REV__nc|ENSG00000148339|Q6KCM7-4|SLC25A25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8939697146416	2	596.892441	1191.77033	3.1998	0.0019099	-2.1691	-0.0012947	1.0307	0.00061523	596.891025075133	107.42	0.22824	107.58	107.47	107.7	0.15781					45	11	5	0	0	0	1.0393	1	46175	46175		0.35063	0	1	429190000	+		24677	14458	12272	12327	28418	28418					0.18211405633246613
PGWAPSQH	8	Unmodified	_PGWAPSQH_					0	0	0			REV__ENSG00000185829|ENST00000336125|ARL17A	REV__ENSG00000185829|ENST00000336125|ARL17A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.2088195681572	2	440.209027	878.403501	0.35825	0.0001577	-0.50308	-0.00022146	-0.14483	-6.3756E-05	440.2089092715055	18.252	0.55808	18.252	18.149	18.708	0					33	20	2	0	0	0	0.76103	1	7620	7620		24.674	1.5255	1	1126100	+		24678	11476	12273	12328	28419	28419					-0.04056497139379189
PGWAPSQH	8	Unmodified	_PGWAPSQH_					0	0	0			REV__ENSG00000185829|ENST00000336125|ARL17A	REV__ENSG00000185829|ENST00000336125|ARL17A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	440.209027	878.403501	0.68233	0.00030037	0.3646	0.0001605	1.0469	0.00046087	440.20921973575787	17.282	0.33264	18.18	17.991	18.323	0.89794	-0.00078273	0.00029727	NaN	24.674	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338920	+		24679	11476	12273	12328							-0.04056497139379189
PGWSTRCS	8	Unmodified	_PGWSTRCS_					0	0	0			REV__ENST00000443276.6_1_11:75188776-75188863:-|nuORF	REV__ENST00000443276.6_1_11:75188776-75188863:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	447.2022888064384	2	447.200344	892.386136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.59	1	102.75	102.25	103.25	0.16445								0	0	0	1.0178	1	43196	43196		0.79363	0	1		+		24680	13095	12274	12329	28420	28420					-0.06436160736700458
PGYIVSQMI	9	Unmodified	_PGYIVSQMI_					0	0	0		tr|A0A7D6W1W6|A0A7D6W1W6_9CLOTAquaporinfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04235PE=3SV=1	tr|A0A7D6W1W6|A0A7D6W1W6_9CLOTAquaporinfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04235PE=3SV=1	tr|A0A7D6W1W6|A0A7D6W1W6_9CLOTAquaporinfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04235PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2639343142509	2	504.265153	1006.51575	0.52756	0.00026603	-0.59499	-0.00030003	-0.067426	-3.4001E-05	504.26540282782565	55.685	0.26775	57.653	57.543	57.811	1.9684					19	10	2	0	0	0	0.3154	1	23403	23403		24.674	0	1	11176000			24681	17024	12275	12330	28421	28421					0.012755958225966424
PGYVLSED	8	Unmodified	_PGYVLSED_					0	0	0		ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant;ZAN|p.L2364Cfs*29|1|0.04|ENSG00000146839|chr7:100787998-100787999|-/TG|frameshift_variant;ZAN|p.L2364Pfs*36|1|0.04|ENSG00000146839|chr7:100787999-100788000|-/CTCCCGGGTTCAAGCAATTCTCT|frameshift_variant;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN	ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant	ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.2082702517509	2	440.208358	878.402163	0.35825	0.0001577	1.016	0.00044724	1.3742	0.00060495	440.2089092715055	18.252	0.55808	18.252	18.149	18.708	0					33	20	2	0	0	0	0.82039	2	7575	7575;7691		19.439	0	1	1126100			24682	3164	12276	12331	28422;28423	28422					-0.041901760188011394
PGYVLSED	8	Unmodified	_PGYVLSED_					0	0	0		ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant;ZAN|p.L2364Cfs*29|1|0.04|ENSG00000146839|chr7:100787998-100787999|-/TG|frameshift_variant;ZAN|p.L2364Pfs*36|1|0.04|ENSG00000146839|chr7:100787999-100788000|-/CTCCCGGGTTCAAGCAATTCTCT|frameshift_variant;nc|ENSG00000146839|Q9Y493-5|ZAN;nc|ENSG00000146839|Q9Y493-4|ZAN;nc|ENSG00000146839|Q9Y493-3|ZAN;nc|ENSG00000146839|Q9Y493-6|ZAN;nc|ENSG00000146839|Q9Y493-2|ZAN;ENSG00000146839|ENST00000613979|ZAN;nc|ENSG00000146839|Q9Y493-7|ZAN	ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant	ZAN|p.S2325Lfs*5|1|0.06|ENSG00000146839|chr7:100786133-100786134|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	440.2087585330009	2	440.208358	878.402163	0.92828	0.00040864	2.01	0.0008848	2.9383	0.0012934	440.2092026583141	17.937	0.32834	18.11	17.984	18.312	0.17286					16	10	2	0	0	0	0.82039	1	7446	7446		19.439	0	1	477710			24683	3164	12276	12331	28424	28424					-0.041901760188011394
PGYWPNTEELK	11	Unmodified	_PGYWPNTEELK_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1202880740166	3	445.218949	1332.63502	0.40189	0.00017893	-0.1984	-8.8331E-05	0.20349	9.0596E-05	445.2193227659275	15.297	0.15408	16.123	16.014	16.168	0.82643					5	4	2	0	0	0	0.14606	1	6353	6353		0.45452	0	1	340280			24684	3528	12277	12332	28425	28425					-0.017995390190208127
PHAAKRRR	8	Unmodified	_PHAAKRRR_					0	0	0			REV__ENST00000261951.8_1_5:179921647-179956302:+|nuORF	REV__ENST00000261951.8_1_5:179921647-179956302:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3055602908134	2	496.304659	990.594764	1.5765	0.0007824	-0.38324	-0.0001902	1.1932	0.0005922	496.3044338615781	80.391	0.5011	80.391	80.135	80.636	0					44	15	4	0	0	0	0.88958	2	33424	33424;33469		2.8892	0	1	8018600	+		24685	12189	12278	12333	28426;28427	28426					0.09909048682413868
PHAAKRRR	8	Unmodified	_PHAAKRRR_					0	0	0			REV__ENST00000261951.8_1_5:179921647-179956302:+|nuORF	REV__ENST00000261951.8_1_5:179921647-179956302:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3053161501884	2	496.304659	990.594764	2.5178	0.0012496	-0.84284	-0.0004183	1.675	0.0008313	496.3039411794191	80.22	0.52987	80.521	80.258	80.788	0.30046					46	16	4	0	0	0	0.88958	1	33529	33529		2.8892	0	1	9685600	+		24686	12189	12278	12333	28428	28428					0.09909048682413868
PHAGLGAC	8	Unmodified	_PHAGLGAC_					0	0	0		ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.1727172732353	2	363.173598	724.332644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.023	1	69.023	68.523	69.523	0								0	0	0	1.0178	1	28744	28744		0.79363	0	1				24687	7459	12279	12334	28429	28429					-0.040549134485672766
PHAGLGAC	8	Unmodified	_PHAGLGAC_					0	0	0		ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.1734191775322	2	363.173598	724.332644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.401	1	63.731	63.231	64.231	0.32923								0	0	0	1.0178	1	26561	26561		0.79363	0	1				24688	7459	12279	12334	28430	28430					-0.040549134485672766
PHAGLGAC	8	Unmodified	_PHAGLGAC_					0	0	0		ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	ENST00000586888.1_1_19:30157864-30158056:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.1728698611259	2	363.173598	724.332644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.119	1	69.441	68.941	69.941	0.32224								0	0	0	1.0178	1	28932	28932		0.79363	0	1				24689	7459	12279	12334	28431	28431					-0.040549134485672766
PHALREKRTT	10	Unmodified	_PHALREKRTT_					0	0	0		ENSG00000104408|ENST00000220849|EIF3E;ENST00000518442.5_1_8:109247181-109261015:-|nuORF	ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.8504516482353	2	604.846553	1207.67855	4.1513	0.0025109	-0.38679	-0.00023395	3.7645	0.002277	604.8462411817486	92.586	0.32785	93.522	93.342	93.67	0.93623					16	9	2	0	0	0	0.89646	1	39008	39008		1.8442	0	1	583240			24690	1461	12280	12335	28432	28432					0.08302115268793386
PHARLHRE	8	Unmodified	_PHARLHRE_					0	0	0			REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2816345095634	2	508.280849	1014.54715	2.6184	0.0013309	-0.79987	-0.00040656	1.8185	0.0009243	508.28029320582954	84.291	0.40641	84.291	84.119	84.526	0					31	12	3	0	0	0	0.88958	1	35160	35160		2.8892	0	1	4772600	+		24691	12544	12281	12336	28433	28433					0.040453496915461074
PHARLHRE	8	Unmodified	_PHARLHRE_					0	0	0			REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2813293337822	2	508.280849	1014.54715	2.7186	0.0013818	-0.70297	-0.00035731	2.0157	0.0010245	508.28041175615004	84.249	0.51057	84.51	84.248	84.759	0.26083					33	15	3	0	0	0	0.88958	2	35200	35200;35246		2.8892	0	1	3587600	+		24692	12544	12281	12336	28434;28435	28434					0.040453496915461074
PHARLHRE	8	Unmodified	_PHARLHRE_					0	0	0			REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	REV__ENST00000355468.7_2_17:39968768-39968819:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	508.280849	1014.54715	2.7186	0.0013818	-0.70297	-0.00035731	2.0157	0.0010245	508.28041175615004	84.249	0.51057	84.51	84.248	84.759	0.26083	0.10959	5.4405E-05	NaN	2.8892	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3587600	+		24693	12544	12281	12336							0.040453496915461074
PHARPTHR	8	Unmodified	_PHARPTHR_					0	0	0			REV__ENSG00000137142|ENST00000377694|IGFBPL1	REV__ENSG00000137142|ENST00000377694|IGFBPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2681762576103	2	486.267742	970.52093	2.0584	0.0010009	-1.4872	-0.00072318	0.57121	0.00027776	486.2669220984915	81.809	0.45667	81.809	81.582	82.039	0					36	14	4	0	0	0	0.88958	2	34041	34041;34095		2.8892	0	1	6542800	+		24694	10013	12282	12337	28436;28437	28436					0.03449080520078951
PHCLPATRLL	10	Unmodified	_PHCLPATRLL_					0	0	0		MTSS1|p.S376T|1|0.04|ENSG00000170873|chr8:124557785-124557785|A/T|missense_variant	MTSS1|p.S376T|1|0.04|ENSG00000170873|chr8:124557785-124557785|A/T|missense_variant	MTSS1|p.S376T|1|0.04|ENSG00000170873|chr8:124557785-124557785|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.8203002810478	2	560.818418	1119.62228	2.5365	0.0014225	3.7233	0.0020881	6.2598	0.0035106	560.8197866290992	88.922	0.42099	89.145	88.906	89.327	0.2236					27	12	3	0	0	0	0.87343	1	37237	37237		4.3292	2.0265	1	2705400			24695	7801	12283	12338	28438	28438					0.06725771107767287
PHCQAGAPP	9	Unmodified	_PHCQAGAPP_					0	0	0			REV__CSF1|p.V497Lfs*50|1|0.22|ENSG00000184371|chr1:109924109-109924110|TG/-|frameshift_variant	REV__CSF1|p.V497Lfs*50|1|0.22|ENSG00000184371|chr1:109924109-109924110|TG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	439.2527648806572	2	439.202887	876.391221	2.8337	0.0012446	-2.9781	-0.001308	-0.14446	-6.3448E-05	439.20164341848374	72.07	0.20992	73.894	73.815	74.024	1.824					9	6	2	0	0	0	0.11684	1	30237	30237		4.3292	1.7518	1	447120	+		24696	8411	12284	12339	28439	28439					-0.051918568740802584
PHDSFGLLI	9	Unmodified	_PHDSFGLLI_					0	0	0			REV__ENSG00000177476|ENST00000320002|OR2G3	REV__ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7701293826103	2	499.768917	997.523281	2.3929	0.0011959	-0.0003437	-1.7177E-07	2.3926	0.0011957	499.7685924763142	47.616	0.38302	48.998	48.759	49.142	1.3825					29	11	3	0	0	0	0.069258	2	19890	19890;19940		60.39	18.295	1	3195500	+		24697	11219	12285	12340	28440;28441	28440					0.024420714145321654
PHDSFGLLI	9	Unmodified	_PHDSFGLLI_					0	0	0			REV__ENSG00000177476|ENST00000320002|OR2G3	REV__ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7701293826103	2	499.768917	997.523281	2.1746	0.0010868	1.0133	0.00050642	3.1879	0.0015932	499.76899309750706	47.103	0.38019	49.079	48.87	49.25	1.976					25	11	3	0	0	0	0.09539	2	19734	19683;19734		50.855	16.753	1	3519100	+		24698	11219	12285	12340	28442;28443	28443					0.024420714145321654
PHDSFGLLI	9	Unmodified	_PHDSFGLLI_					0	0	0			REV__ENSG00000177476|ENST00000320002|OR2G3	REV__ENSG00000177476|ENST00000320002|OR2G3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	499.768917	997.523281	2.3929	0.0011959	-0.0003437	-1.7177E-07	2.3926	0.0011957	499.7685924763142	47.616	0.38302	48.998	48.759	49.142	1.3825	-0.040527	-0.00052887	NaN	60.39	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3195500	+		24699	11219	12285	12340							0.024420714145321654
PHDSFGLLI	9	Unmodified	_PHDSFGLLI_					0	0	0			REV__ENSG00000177476|ENST00000320002|OR2G3	REV__ENSG00000177476|ENST00000320002|OR2G3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.768917	997.523281	2.1746	0.0010868	1.0133	0.00050642	3.1879	0.0015932	499.76899309750706	47.103	0.38019	49.079	48.87	49.25	1.976	0.040527	0.00048431	NaN	60.39	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3519100	+		24700	11219	12285	12340							0.024420714145321654
PHEFQQQKRR	10	Unmodified	_PHEFQQQKRR_					0	0	0		ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	ENSG00000119403|ENST00000373896|PHF19	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9090453982353	3	451.909331	1352.70617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.474	1	18.474	17.974	18.974	0								0	0	0	0.66222	1	7678	7678		0.69767	0	1				24701	2070	12286	12341	28444	28444					0.04392018529028974
PHEGIPFLL	9	Unmodified	_PHEGIPFLL_					0	0	0		ENST00000528157.5_1_3:51426658-51426787:+|nuORF	ENST00000528157.5_1_3:51426658-51426787:+|nuORF	ENST00000528157.5_1_3:51426658-51426787:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7912475466728	2	511.78711	1021.55967	3.1639	0.0016193	0.20999	0.00010747	3.3739	0.0017267	511.787755139399	59.512	0.35591	61.481	61.256	61.612	1.969					33	11	4	0	0	0	0.37357	1	25003	25003		21.747	0.87544	1	3227000			24702	7143	12287	12342	28445	28445					0.0497494831122367
PHFFFIRI	8	Unmodified	_PHFFFIRI_					0	0	0			REV__ENST00000282561.3_1_6:121769761-121769857:+|nuORF	REV__ENST00000282561.3_1_6:121769761-121769857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8060180544853	2	538.805637	1075.59672	2.5553	0.0013768	-3.2561	-0.0017544	-0.70078	-0.00037758	538.8037950704972	86.744	0.4221	86.744	86.489	86.911	0					34	15	3	0	0	0	0.88958	1	36110	36110		2.8892	0	1	6770100	+		24703	12262	12288	12343	28446	28446					0.0619466464765992
PHFFFIRI	8	Unmodified	_PHFFFIRI_					0	0	0			REV__ENST00000282561.3_1_6:121769761-121769857:+|nuORF	REV__ENST00000282561.3_1_6:121769761-121769857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.8061401247978	2	538.805637	1075.59672	2.6232	0.0014134	-1.0747	-0.00057904	1.5486	0.00083438	538.8048416514839	86.627	0.38796	86.871	86.665	87.053	0.24387					25	15	2	0	0	0	0.88958	1	36224	36224		2.8892	0	1	5704200	+		24704	12262	12288	12343	28447	28447					0.0619466464765992
PHFVPIMLPPL	11	Unmodified	_PHFVPIMLPPL_					0	0	0			REV__SOX5|p.P284H|1|0.06|ENSG00000134532|chr12:23665524-23665524|G/T|missense_variant	REV__SOX5|p.P284H|1|0.06|ENSG00000134532|chr12:23665524-23665524|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	630.8638183474541	2	630.862295	1259.71004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.331	1	79.632	79.132	80.132	0.30047								0	0	0	0.63775	1	33170	33170		1.4819	0	1		+		24705	14631	12289	12344	28448	28448					0.09056971978520778
PHGCDSSS	8	Unmodified	_PHGCDSSS_					0	0	0		ENST00000493116.5_1_3:180893053-180893335:+|nuORF	ENST00000493116.5_1_3:180893053-180893335:+|nuORF	ENST00000493116.5_1_3:180893053-180893335:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	395.1446105837822	2	395.145235	788.275917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.22	103.72	104.72	0.1731								0	0	0	1.0178	1	43946	43946		0.69038	0	1				24706	6923	12290	12345	28449	28449					-0.12669005795726207
PHGEAGII	8	Unmodified	_PHGEAGII_					0	0	0		tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	396.8020812869072	2	397.213778	792.413003	1.5355	0.00060992	1.3711	0.00054461	2.9066	0.0011545	397.21468738788	68.83	0.65696	69.153	68.905	69.562	0.32223					46	20	3	0	0	0	2.3239	1	28964	28964		0.79363	0	1	1046700			24707	16800	12291	12346	28450	28450					0.00849271146148567
PHGGCFSV	8	Unmodified	_PHGGCFSV_					0	0	0		ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1805908083916	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.732	1	65.059	64.559	65.559	0.32689								0	0	0	1.0178	1	27114	27114		0.79363	0	1				24708	7344	12292	12347	28451	28451					-0.0658693079412842
PHGGCFSV	8	Unmodified	_PHGGCFSV_					0	0	0		ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1805297732353	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.307	1	27.578	27.078	28.078	1.2715								0	0	0	1.0178	1	11016	11016		2.8892	0	1				24709	7344	12292	12347	28452	28452					-0.0658693079412842
PHGGCFSV	8	Unmodified	_PHGGCFSV_					0	0	0		ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	ENST00000563328.4_1_16:72821841-72822171:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1803161501884	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.628	1	27.899	27.399	28.399	1.2715								0	0	0	1.0178	1	11151	11151		2.8892	0	1				24710	7344	12292	12347	28453	28453					-0.0658693079412842
PHGKPSGR	8	Unmodified	_PHGKPSGR_					0	0	0		ENST00000240487.5_2_4:154557538-154557676:+|nuORF	ENST00000240487.5_2_4:154557538-154557676:+|nuORF	ENST00000240487.5_2_4:154557538-154557676:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	418.2288085818291	2	418.230294	834.446034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.124	1	25.365	24.865	25.865	1.241								0	0	0	1.0178	1	10088	10088		5.2307	2.3415	1				24711	5568	12293	12348	28454	28454					0.022188979888596805
PHGKPSGR	8	Unmodified	_PHGKPSGR_					0	0	0		ENST00000240487.5_2_4:154557538-154557676:+|nuORF	ENST00000240487.5_2_4:154557538-154557676:+|nuORF	ENST00000240487.5_2_4:154557538-154557676:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	418.2286559939384	2	418.230294	834.446034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.882	1	25.566	25.066	26.066	1.6845								0	0	0	1.0178	1	9972	9972		5.2307	2.3415	1				24712	5568	12293	12348	28455	28455					0.022188979888596805
PHGKRVNLPF	10	Unmodified	_PHGKRVNLPF_					0	0	0			REV__nc|ENSG00000204580|Q08345-2|DDR1	REV__nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8400756716728	2	582.835457	1163.65636	4.0072	0.0023355	-1.612	-0.00093951	2.3952	0.001396	582.8334040592971	90.195	0.37508	91.599	91.431	91.806	1.4045					14	11	2	0	0	0	0.87343	1	38004	38004		4.3292	0.73274	1	1039100	+		24713	11791	12294	12349	28456	28456					0.0810793559103331
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278869509697	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.923	1	27.184	26.684	27.684	0.26173								0	0	0	1.0178	1	11257	11257		0.79363	0.79363	1		+		24714	12908	12295	12350	28457	28457					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1304504275322	2	388.128531	774.242508	1.8359	0.00071258	1.8553	0.0007201	3.6912	0.0014327	388.12886238219454	75.885	1.6679	77.179	76.787	78.455	1.2938					71	53	3	0	0	0	0.89178	1	31832	31832		0.69038	0	1	1500200	+		24715	12908	12295	12350	28458	28458					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1285888552666	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.988	1	17.886	17.386	18.386	0.89794								0	0	0	1.0178	1	7071	7071		0.79363	0.79363	1		+		24716	12908	12295	12350	28459	28459					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1275207400322	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.166	1	27.438	26.938	27.938	1.2715								0	0	0	1.0178	1	10958	10958		0.79363	0.79363	1		+		24717	12908	12295	12350	28460	28460					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1276733279228	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.282	1	27.554	27.054	28.054	1.2715								0	0	0	1.0178	1	11006	11006		0.79363	0.79363	1		+		24718	12908	12295	12350	28461	28461					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1275207400322	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.698	1	25.349	24.849	25.849	1.6511								0	0	0	1.0178	1	9896	9896		0.79363	0.79363	1		+		24719	12908	12295	12350	28462	28462					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1279174685478	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.831	1	25.515	25.015	26.015	1.6845								0	0	0	1.0178	1	9951	9951		0.69038	0.69038	1		+		24720	12908	12295	12350	28463	28463					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1281005740166	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.022	1	27.739	27.239	28.239	1.7167								0	0	0	1.0178	1	10882	10882		0.79363	0.79363	1		+		24721	12908	12295	12350	28464	28464					-0.15364330839281592
PHGSCGCD	8	Unmodified	_PHGSCGCD_					0	0	0			REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	REV__ENST00000407765.1_1_6:131505690-131506047:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	388.128531	774.242508	1.8359	0.00071258	1.8553	0.0007201	3.6912	0.0014327	388.12886238219454	75.885	1.6679	77.179	76.787	78.455	1.2938	-0.082002	0.00022065	NaN	0.69038	71	53	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1500200	+		24722	12908	12295	12350							-0.15364330839281592
PHGSRKGG	8	Unmodified	_PHGSRKGG_					0	0	0			REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2152282595634	2	398.214643	794.414734	-0.010828	-4.3118E-06	1.7041	0.00067859	1.6933	0.00067428	398.21526851632717	70.194	0.4981	70.194	69.866	70.364	0					37	15	4	0	0	0	0.88958	1	29207	29207		2.8892	0	1	5862900	+		24723	13684	12296	12351	28465	28465					0.009303249547770065
PHGSRKGG	8	Unmodified	_PHGSRKGG_					0	0	0			REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2155639529228	2	398.214643	794.414734	1.3317	0.00053029	0.86905	0.00034607	2.2007	0.00087636	398.2149065733055	69.981	0.49301	70.304	70.098	70.591	0.32224					34	15	3	0	0	0	0.88958	2	29291	29291;29333		2.8892	0	1	4532700	+		24724	13684	12296	12351	28466;28467	28466					0.009303249547770065
PHGSRKGG	8	Unmodified	_PHGSRKGG_					0	0	0			REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.2152282595634	2	398.214643	794.414734	1.4919	0.0005941	0.38208	0.00015215	1.874	0.00074625	398.2147183091544	69.179	0.53235	70.545	70.284	70.817	1.3657					37	17	3	0	0	0	0.88958	3	28999	28999;29047;29100		2.8892	0	1	9954800	+		24725	13684	12296	12351	28468;28469;28470	28468					0.009303249547770065
PHGSRKGG	8	Unmodified	_PHGSRKGG_					0	0	0			REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	REV__ENST00000528393.1_1_11:79699022-79699172:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.2155029177666	2	398.214643	794.414734	1.164	0.00046353	0.29164	0.00011614	1.4557	0.00057967	398.2146901211061	68.87	0.48003	70.723	70.497	70.977	1.853					36	15	3	0	0	0	0.88958	2	28877	28877;28923		2.8892	0	1	7740100	+		24726	13684	12296	12351	28471;28472	28471					0.009303249547770065
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.2552062869072	2	464.254634	926.494716	2.0452	0.00094949	-1.2216	-0.00056715	0.82356	0.00038234	464.25401492972026	79.131	0.48125	79.131	78.877	79.359	0					41	15	4	0	0	0	0.88504	2	32905	32905;32949		5.7604	0	1	7403900	+		24727	13949	12297	12352	28473;28474	28473					0.02852811348600426
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.2549926638603	2	464.254634	926.494716	2.383	0.0011063	-1.3451	-0.00062447	1.0379	0.00048186	464.2539972083779	79.053	0.55315	79.354	79.07	79.623	0.30052					46	17	5	0	0	0	0.88504	1	33024	33024		5.7604	0	1	10212000	+		24728	13949	12297	12352	28475	28475					0.02852811348600426
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.2548095583916	2	464.254634	926.494716	2.8019	0.0013008	-1.8196	-0.00084477	0.98228	0.00045603	464.25381143593796	78.23	0.54171	79.497	79.275	79.817	1.2668					41	17	4	0	0	0	0.88504	2	32827	32827;32881		5.7604	0	1	9168700	+		24729	13949	12297	12352	28476;28477	28476					0.02852811348600426
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	464.254634	926.494716	2.0452	0.00094949	-1.2216	-0.00056715	0.82356	0.00038234	464.25401492972026	79.131	0.48125	79.131	78.877	79.359	0	-0.19623	0.00021766	NaN	5.7604	41	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7403900	+		24730	13949	12297	12352							0.02852811348600426
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	464.254634	926.494716	2.383	0.0011063	-1.3451	-0.00062447	1.0379	0.00048186	464.2539972083779	79.053	0.55315	79.354	79.07	79.623	0.30052	0.026646	0.00010301	NaN	5.7604	46	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10212000	+		24731	13949	12297	12352							0.02852811348600426
PHHARGRP	8	Unmodified	_PHHARGRP_					0	0	0			REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	REV__ENST00000568500.1_1_16:30709080-30709953:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	464.254634	926.494716	2.8019	0.0013008	-1.8196	-0.00084477	0.98228	0.00045603	464.25381143593796	78.23	0.54171	79.497	79.275	79.817	1.2668	0.16958	-0.00033758	NaN	5.7604	41	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9168700	+		24732	13949	12297	12352							0.02852811348600426
PHIGLKEAMLY	11	Unmodified	_PHIGLKEAMLY_					0	0	0			REV__ENSG00000111716|ENST00000350669|LDHB	REV__ENSG00000111716|ENST00000350669|LDHB	MSMS	GG20161007_CRH_Patient100_A02_02	2	636.3463012576103	2	636.344466	1270.67438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.473	1	53.796	53.296	54.296	0.32283								0	0	0	0.63775	1	22398	22398		1.4819	0	1		+		24733	9339	12298	12353	28478	28478					0.04986889730867006
PHIIKLVLKSF	11	Unmodified	_PHIIKLVLKSF_					0	0	0		ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	324.2180663943291	4	324.461596	1293.81728	-0.11075	-3.5933E-05	2.3741	0.00077032	2.2634	0.00073439	324.4626433541574	22.202	0.18458	23.818	23.706	23.89	1.6158					8	5	2	0	0	0	0.14606	1	9284	9284		0.094841	0.094841	1	137030			24734	6304	12299	12354	28479	28479					0.18212265184388343
PHIIKLVLKSF	11	Unmodified	_PHIIKLVLKSF_					0	0	0		ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	ENST00000397006.2_1_5:40777312-40798264:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	324.461596	1293.81728	0.13032	4.2285E-05	1.866	0.00060545	1.9963	0.00064773	324.4621634768498	23.621	0.34267	23.854	23.628	23.971	0.23306	0.017899	-0.00016905	NaN	0.094841	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196910			24735	6304	12299	12354							0.18212265184388343
PHIKFGGG	8	Unmodified	_PHIKFGGG_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	812.4443847537041	1	812.441349	811.434072	1.0123	0.00082244	0.11652	9.4669E-05	1.1288	0.00091711	812.4398007731347	68.858	0.36207	70.711	70.558	70.92	1.853					16	11	2	0	0	0	0.88958	1	28882	28882		2.8892	0	1	2329900	+		24736	8606	12300	12355	28480	28480					0.02081281245682476
PHIPPIDM	8	Unmodified	_PHIPPIDM_					0	0	0			REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	REV__nc|ENSG00000117523|Q9Y520-2|PRRC2C	MSMS	GG20161007_CRH_Patient100_W632_01	3	460.2386657595634	2	460.238938	918.463324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.48	1	35.754	35.254	36.254	1.2746								0	0	0	1.0178	1	14472	14472		2.8892	0	1		+		24737	9503	12301	12356	28481	28481					0.0008305747962822352
PHIRGLKKM	9	Unmodified	_PHIRGLKKM_					0	0	0			REV__PCDHB4|p.N462Pfs*208|1|0.19|ENSG00000081818|chr5:141123382-141123395|AACAACAGCCCCGC/-|frameshift_variant	REV__PCDHB4|p.N462Pfs*208|1|0.19|ENSG00000081818|chr5:141123382-141123395|AACAACAGCCCCGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3329345583916	2	540.328953	1078.64335	2.3554	0.0012727	2.5294	0.0013667	4.8848	0.0026394	540.330300537985	85.276	0.4087	85.276	85.1	85.508	0					32	12	3	0	0	0	0.82604	3	35489	35489;35533;35574		2.3027	0	1	5524500	+		24738	8821	12302	12357	28482;28483;28484	28482					0.107177812072905
PHIRGLKKM	9	Unmodified	_PHIRGLKKM_					0	0	0			REV__PCDHB4|p.N462Pfs*208|1|0.19|ENSG00000081818|chr5:141123382-141123395|AACAACAGCCCCGC/-|frameshift_variant	REV__PCDHB4|p.N462Pfs*208|1|0.19|ENSG00000081818|chr5:141123382-141123395|AACAACAGCCCCGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3322631716728	2	540.328953	1078.64335	2.5873	0.001398	2.0047	0.0010832	4.592	0.0024812	540.3299987479547	85.212	0.436	85.464	85.165	85.601	0.25227					34	13	3	0	0	0	0.82604	3	35560	35560;35606;35645		2.3027	0	1	6336000	+		24739	8821	12302	12357	28485;28486;28487	28485					0.107177812072905
PHIRPLEKE	9	Unmodified	_PHIRPLEKE_					0	0	0		ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	ENSG00000120800|ENST00000261637|UTP20	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8208495974541	2	559.819473	1117.62439	2.5824	0.0014457	-1.4121	-0.00079051	1.1704	0.00065519	559.8189152357136	91.84	0.51482	92.03	91.852	92.367	0.19042					28	15	3	0	0	0	0.84963	1	38509	38509		0.6015	0	1	1002300			24740	2118	12303	12358	28488	28488					0.07028523117242003
PHIWIELR	8	Unmodified	_PHIWIELR_					0	0	0			REV__ENSG00000070366|ENST00000263073|SMG6	REV__ENSG00000070366|ENST00000263073|SMG6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0691100955009	3	355.206426	1062.59745	-0.18821	-6.6853E-05	1.5495	0.0005504	1.3613	0.00048355	355.2074449481372	21.859	0.26927	23.036	22.901	23.17	1.177					11	8	2	0	0	0	2.3239	1	9152	9152		0.45834	0.18932	1	366160	+		24741	8716	12304	12359	28489	28489					0.06865459296682275
PHIWIELR	8	Unmodified	_PHIWIELR_					0	0	0			REV__ENSG00000070366|ENST00000263073|SMG6	REV__ENSG00000070366|ENST00000263073|SMG6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0697509646416	3	355.206426	1062.59745	0.054427	1.9333E-05	1.0076	0.00035791	1.062	0.00037724	355.207205561582	21.397	0.29812	23.013	22.902	23.2	1.6158					13	9	2	0	0	0	2.3239	1	8991	8991		0.45834	0.18932	1	303030	+		24742	8716	12304	12359	28490	28490					0.06865459296682275
PHIWLSFVPI	10	Unmodified	_PHIWLSFVPI_					0	0	0			REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.8473998904228	2	604.844959	1207.67537	2.2773	0.0013774	1.2473	0.00075445	3.5247	0.0021319	604.8456963550433	93.185	0.34743	93.185	93.044	93.392	0					17	10	2	0	0	0	0.89646	1	38954	38954		1.8442	0	1	933610	+		24743	12730	12305	12360	28491	28491					0.07983472162095495
PHIWLSFVPI	10	Unmodified	_PHIWLSFVPI_					0	0	0			REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.8465453982353	2	604.844959	1207.67537	2.5664	0.0015523	0.88112	0.00053294	3.4475	0.0020852	604.8451945793287	93.203	0.32514	93.372	93.158	93.483	0.16835					16	9	2	0	0	0	0.89646	2	38993	38993;39058		1.8442	0	1	652650	+		24744	12730	12305	12360	28492;28493	28492					0.07983472162095495
PHIWLSFVPI	10	Unmodified	_PHIWLSFVPI_					0	0	0			REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	604.844959	1207.67537	2.2773	0.0013774	1.2473	0.00075445	3.5247	0.0021319	604.8456963550433	93.185	0.34743	93.185	93.044	93.392	0	-0.22674	-0.00043142	NaN	1.8442	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	933610	+		24745	12730	12305	12360							0.07983472162095495
PHIWLSFVPI	10	Unmodified	_PHIWLSFVPI_					0	0	0			REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	604.844959	1207.67537	2.5664	0.0015523	0.88112	0.00053294	3.4475	0.0020852	604.8451945793287	93.203	0.32514	93.372	93.158	93.483	0.16835	-0.040351	-0.00087442	NaN	1.8442	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	652650	+		24746	12730	12305	12360							0.07983472162095495
PHIWLSFVPI	10	Unmodified	_PHIWLSFVPI_					0	0	0			REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	REV__ENST00000377575.2_1_6:26546172-26546349:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	604.844959	1207.67537	3.2931	0.0019918	3.7778	0.002285	7.0709	0.0042768	604.8474160603798	92.242	0.29432	93.569	93.405	93.699	1.3269	0.15718	0.0026296	NaN	1.8442	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400940	+		24747	12730	12305	12360							0.07983472162095495
PHKGARSS	8	Unmodified	_PHKGARSS_					0	0	0			REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.2287170290947	2	420.227751	838.440949	0.80275	0.00033734	1.1087	0.00046593	1.9115	0.00080327	420.2282574095694	73.328	0.49136	73.328	73.059	73.55	0					37	15	3	0	0	0	0.88958	3	30482	30482;30530;30571		2.8892	0	1	7082200	+		24748	13163	12306	12361	28494;28495;28496	28494					0.015265941262327942
PHKGARSS	8	Unmodified	_PHKGARSS_					0	0	0			REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.2287780642509	2	420.227751	838.440949	2.5989	0.0010921	0.58696	0.00024666	3.1859	0.0013388	420.2280118591079	72.378	0.51933	73.707	73.423	73.943	1.3297					44	16	3	0	0	0	0.88504	2	30382	30382;30438		5.7604	0	1	7743500	+		24749	13163	12306	12361	28497;28498	28497					0.015265941262327942
PHKGARSS	8	Unmodified	_PHKGARSS_					0	0	0			REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2285644412041	2	420.227751	838.440949	2.7029	0.0011358	0.45065	0.00018938	3.1535	0.0013252	420.2278818921173	72.065	0.45621	73.888	73.694	74.151	1.824					39	14	3	0	0	0	0.88958	2	30216	30216;30264		2.8892	0	1	12584000	+		24750	13163	12306	12361	28499;28500	28499					0.015265941262327942
PHKGARSS	8	Unmodified	_PHKGARSS_					0	0	0			REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	REV__ENST00000455833.6_2_1:19232893-19233121:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	420.227751	838.440949	2.4792	0.0010418	-0.58209	-0.00024461	1.8971	0.00079722	420.2275207023407	73.215	0.47823	73.54	73.276	73.754	0.32494	-0.076044	-0.00078829	NaN	5.7604	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11836000	+		24751	13163	12306	12361							0.015265941262327942
PHKKHKRREK	10	Unmodified	_PHKKHKRREK_					0	0	0			REV__ENSG00000130287|ENST00000252575|NCAN	REV__ENSG00000130287|ENST00000252575|NCAN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.6089965701103	3	448.609216	1342.80582	1.3963	0.0006264	-2.2859	-0.0010255	-0.88954	-0.00039906	448.60807314622133	96.556	0.15848	96.556	96.475	96.634	0					10	4	3	0	0	0	0.89803	1	40373	40373		0.77653	0.14971	1	2562400	+		24752	9774	12307	12362	28501	28501					0.14812880933618544
PHKKRSKSR	9	Unmodified	_PHKKRSKSR_					0	0	0		nc|ENSG00000153914|Q8WXA9|SREK1;ENSG00000153914|ENST00000334121|SREK1;ERBB2IP-SREK1|2|fusion;ERBB2IP-SREK1|1|fusion	nc|ENSG00000153914|Q8WXA9|SREK1	nc|ENSG00000153914|Q8WXA9|SREK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3446533083916	2	562.343981	1122.67341	2.1603	0.0012148	-0.046303	-2.6038E-05	2.114	0.0011888	562.3439141666323	87.596	0.35661	87.596	87.403	87.759	0					28	11	3	0	0	0	0.82604	2	36587	36587;36640		2.3027	0.4585	1	4229800			24753	3369	12308	12363	28502;28503	28502					0.11697856196838075
PHKKRSKSR	9	Unmodified	_PHKKRSKSR_					0	0	0		nc|ENSG00000153914|Q8WXA9|SREK1;ENSG00000153914|ENST00000334121|SREK1;ERBB2IP-SREK1|2|fusion;ERBB2IP-SREK1|1|fusion	nc|ENSG00000153914|Q8WXA9|SREK1	nc|ENSG00000153914|Q8WXA9|SREK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3459960818291	2	562.343981	1122.67341	2.5096	0.0014112	1.0399	0.00058477	3.5495	0.001996	562.3444453162037	87.572	0.42805	87.807	87.518	87.946	0.23471					33	13	3	0	0	0	0.82604	1	36715	36715		2.3027	0	1	4202100			24754	3369	12308	12363	28504	28504					0.11697856196838075
PHKKRSKSR	9	Unmodified	_PHKKRSKSR_					0	0	0		nc|ENSG00000153914|Q8WXA9|SREK1;ENSG00000153914|ENST00000334121|SREK1;ERBB2IP-SREK1|2|fusion;ERBB2IP-SREK1|1|fusion	nc|ENSG00000153914|Q8WXA9|SREK1	nc|ENSG00000153914|Q8WXA9|SREK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	562.343981	1122.67341	3.7907	0.0021317	-1.9221	-0.0010809	1.8686	0.0010508	562.3429005013392	86.79	0.29393	87.882	87.712	88.006	1.0918	0.12013	-0.0022437	NaN	2.3027	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2219100			24755	3369	12308	12363							0.11697856196838075
PHKMHKAIA	9	Unmodified	_PHKMHKAIA_					0	0	0			REV__ENSG00000118898|ENST00000345988|PPL	REV__ENSG00000118898|ENST00000345988|PPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7947875857353	2	516.792204	1031.56985	2.6247	0.0013564	1.5953	0.00082441	4.22	0.0021809	516.7931662648953	84.352	0.72679	84.352	84.086	84.813	0					49	22	4	0	0	0	0.76456	1	35156	35156		4.756	1.8668	1	7053000	+		24756	9526	12309	12364	28505	28505					0.055332327648102364
PHKRKKKS	8	Unmodified	_PHKRKKKS_					0	0	0		nc|ENSG00000150776|Q6ZUT1-3|NKAPD1;nc|ENSG00000150776|Q6ZUT1|NKAPD1;ENSG00000150776|ENST00000393047|NKAPD1	nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	nc|ENSG00000150776|Q6ZUT1-3|NKAPD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	504.8268005251884	2	504.824892	1007.63523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.298	1	38.607	38.107	39.107	0.30857								0	0	0	1.0178	1	16113	16113		2.8892	0.58649	1				24757	3273	12310	12365	28506	28506					0.13171970282178336
PHKRKRERKGI	11	Unmodified	_PHKRKRERKGI_					0	0	0			REV__ENST00000531708.1_1_11:58907597-58910423:-|nuORF	REV__ENST00000531708.1_1_11:58907597-58910423:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.9606201052666	3	468.960138	1403.85858	3.4388	0.0016127	-1.7938	-0.00084122	1.645	0.00077144	468.9596886108352	97.163	0.18635	97.253	97.149	97.335	0.090881					10	5	3	0	0	0	1.0388	1	40656	40656		0.50596	0.34663	1	1830400	+		24758	13714	12311	12366	28507	28507					0.17280838996430248
PHKSQLVQI	9	Unmodified	_PHKSQLVQI_					0	0	0			REV__ENSG00000198125|ENST00000397326|MB	REV__ENSG00000198125|ENST00000397326|MB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3073608279228	2	525.308741	1048.60293	1.8567	0.00097533	-3.0326	-0.0015931	-1.1759	-0.00061773	525.3062805354257	83.563	0.43965	84.751	84.483	84.923	1.1879					24	13	3	0	0	0	0.54523	1	35058	35058		13.508	0	1	5524200	+		24759	11703	12312	12367	28508	28508					0.08057138088520333
PHLENSLRR	9	Unmodified	_PHLENSLRR_					0	0	0		nc|ENSG00000147912|Q9UK96-2|FBXO10;ENST00000541804.1_1_9:37512546-37588833:-|nuORF;ENSG00000147912|ENST00000432825|FBXO10	nc|ENSG00000147912|Q9UK96-2|FBXO10	nc|ENSG00000147912|Q9UK96-2|FBXO10	MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3127929568291	2	561.312346	1120.61014	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.151	1	49.151	48.651	49.651	0								0	0	0	0.42693	1	20521	20521		4.756	0	1				24760	3193	12313	12368	28509	28509					0.05465870688931318
PHLFILKQW	9	Unmodified	_PHLFILKQW_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	591.3468505740166	2	591.345126	1180.6757	2.3988	0.0014185	0.98175	0.00058055	3.3806	0.0019991	591.3459314026692	91.078	0.31364	91.078	90.968	91.281	0					19	9	3	0	0	0	0.82604	1	38074	38074		2.3027	0.24298	1	1564200	+		24761	9554	12314	12369	28510	28510					0.09258891881950149
PHLFILKQW	9	Unmodified	_PHLFILKQW_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	591.345126	1180.6757	2.3988	0.0014185	0.98175	0.00058055	3.3806	0.0019991	591.3459314026692	91.078	0.31364	91.078	90.968	91.281	0	-0.26829	-0.0010043	NaN	2.3027	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1564200	+		24762	9554	12314	12369							0.09258891881950149
PHLFILKQW	9	Unmodified	_PHLFILKQW_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	591.345126	1180.6757	2.5346	0.0014988	5.4151	0.0032022	7.9497	0.004701	591.3501903680844	91.054	0.25918	91.264	91.159	91.418	0.20903	-0.08283	0.004239	NaN	2.3027	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1021600	+		24763	9554	12314	12369							0.09258891881950149
PHLFILKQW	9	Unmodified	_PHLFILKQW_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	591.345126	1180.6757	4.3536	0.0025745	2.8251	0.0016706	7.1786	0.0042451	591.3470741579049	90.432	0.32146	91.414	91.268	91.59	0.98157	0.067626	0.0011758	NaN	2.3027	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1073300	+		24764	9554	12314	12369							0.09258891881950149
PHLFILKQW	9	Unmodified	_PHLFILKQW_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	591.345126	1180.6757	4.0998	0.0024244	3.099	0.0018326	7.1988	0.004257	591.3472615783023	90.225	0.37261	91.63	91.4	91.773	1.4045	0.2835	0.0014998	NaN	2.3027	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	840160	+		24765	9554	12314	12369							0.09258891881950149
PHLHLFPFL	9	Unmodified	_PHLHLFPFL_					0	0	0			REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8204833865166	2	560.818744	1119.62294	1.9628	0.0011008	1.5578	0.00087367	3.5206	0.0019744	560.8193690746808	88.972	0.44698	88.972	88.762	89.209	0					31	13	3	0	0	0	0.82604	2	37163	37163;37215		2.3027	0	1	2445900	+		24766	13476	12315	12370	28511;28512	28511					0.06790933819138445
PHLHLFPFL	9	Unmodified	_PHLHLFPFL_					0	0	0			REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.8215820193291	2	560.818744	1119.62294	2.5365	0.0014225	3.1421	0.0017621	5.6786	0.0031846	560.8197866290992	88.922	0.42099	89.145	88.906	89.327	0.2236					27	12	3	0	0	0	0.82604	1	37285	37285		2.3027	0	1	2705400	+		24767	13476	12315	12370	28513	28513					0.06790933819138445
PHLHLFPFL	9	Unmodified	_PHLHLFPFL_					0	0	0			REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	REV__ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8228637576103	2	560.818744	1119.62294	4.6602	0.0026135	2.6542	0.0014885	7.3143	0.004102	560.8197764979941	87.999	0.41512	89.446	89.284	89.699	1.4467					23	12	3	0	0	0	0.82604	1	37128	37128		2.3027	0	1	1945200	+		24768	13476	12315	12370	28514	28514					0.06790933819138445
PHLHRRAA	8	Unmodified	_PHLHRRAA_					0	0	0			REV__ENST00000373209.2_1_10:72360428-72360569:-|nuORF	REV__ENST00000373209.2_1_10:72360428-72360569:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2784911990166	2	479.278109	956.541666	2.163	0.0010367	-1.5092	-0.00072334	0.6538	0.00031335	479.2773897537301	80.418	0.50079	80.418	80.165	80.666	0					38	15	3	0	0	0	0.88958	1	33482	33482		2.8892	0	1	7658600	+		24769	12693	12316	12371	28515	28515					0.06165670899747511
PHLLKLRFK	9	Unmodified	_PHLLKLRFK_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1537658572197	3	384.585238	1150.73388	-0.80356	-0.00030904	-3.9514	-0.0015196	-4.755	-0.0018287	384.5826484764611	27.62	0.30177	27.62	27.532	27.833	0					16	9	2	0	0	0	0.11938	1	11549	11549		0	0	1	586380	+		24770	11592	12317	12372	28516	28516					0.1645457352719859
PHLLLLLG	8	Unmodified	_PHLLLLLG_					0	0	0		chr6:31636811-31636878|94|34.14|0.0|21.7|+|0|PRRC2A,None|1;ERV3-16A3_I-int_dup2611|chr6:29793128-29793966:+|8.709205843380579|0.1449238599365492|5.91|406.0|45|3|anti-sense	chr6:31636811-31636878|94|34.14|0.0|21.7|+|0|PRRC2A,None|1	chr6:31636811-31636878|94|34.14|0.0|21.7|+|0|PRRC2A,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2917053103447	2	438.289288	874.564024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.05	1	104.05	103.55	104.55	0								0	0	0	1.0178	1	43840	43840		0.79363	0	1				24771	272	12318	12373	28517	28517					0.12172457524809488
PHLLRHIPH	9	Unmodified	_PHLLRHIPH_					0	0	0			REV__ENST00000242067.10_1_7:33169206-33169377:+|nuORF	REV__ENST00000242067.10_1_7:33169206-33169377:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3307372927666	2	560.330342	1118.64613	1.8731	0.0010496	-1.0563	-0.00059186	0.81686	0.00045771	560.3292493282892	61.958	0.46838	62.288	62.012	62.48	0.32974					30	14	3	0	0	0	0.75267	1	25920	25920		5.2307	0	1	992670	+		24772	12124	12319	12374	28518	28518					0.09155372656437066
PHLPQRLRPTR	11	Unmodified	_PHLPQRLRPTR_					0	0	0			REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9124023318291	2	685.910019	1369.80549	1.6994	0.0011657	-1.0575	-0.00072532	0.64198	0.00044034	685.9098072200267	97.181	0.11877	97.181	97.109	97.228	0					6	3	2	0	0	0	1.0357	1	40639	40639		1.4819	0	1	1472400	+		24773	14237	12320	12375	28519	28519					0.13537461213786628
PHLPQRLRPTR	11	Unmodified	_PHLPQRLRPTR_					0	0	0			REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	685.910019	1369.80549	1.6994	0.0011657	-1.0575	-0.00072532	0.64198	0.00044034	685.9098072200267	97.181	0.11877	97.181	97.109	97.228	0	-0.037274	0.00090817	NaN	1.4819	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1472400	+		24774	14237	12320	12375							0.13537461213786628
PHLPQRLRPTR	11	Unmodified	_PHLPQRLRPTR_					0	0	0			REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	REV__IRF7|p.D290Efs*112|1|0.67|ENSG00000185507|chr11:613573-613574|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	685.910019	1369.80549	2.6619	0.0018258	-2.2684	-0.0015559	0.3935	0.0002699	685.9086564750194	97.165	0.12295	97.256	97.149	97.272	0.090881	0.037274	-0.00075299	NaN	1.4819	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	826150	+		24775	14237	12320	12375							0.13537461213786628
PHLRQLLGVI	10	Unmodified	_PHLRQLLGVI_					0	0	0		ENST00000486765.5_1_1:3806526-3811957:-|nuORF	ENST00000486765.5_1_1:3806526-3811957:-|nuORF	ENST00000486765.5_1_1:3806526-3811957:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3638793826103	2	573.361308	1144.70806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.17	1	108.22	107.72	108.72	0.050644								0	0	0	0.66155	1	46450	46450		1.8442	0	1				24776	6868	12321	12376	28520	28520					0.14149679284969352
PHLSRRRKIH	10	Unmodified	_PHLSRRRKIH_					0	0	0		ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.4018432497978	2	650.397079	1298.7796	2.6191	0.0017035	2.1448	0.001395	4.7639	0.0030984	650.3988249880672	95.514	0.18246	95.638	95.559	95.741	0.12331					9	5	2	0	0	0	0.89646	1	39980	39980		1.8442	0	1	991030			24777	17370	12322	12377	28521	28521					0.14216611762162756
PHLSRRRKIH	10	Unmodified	_PHLSRRRKIH_					0	0	0		ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	ZNF610|p.H446R|1|0.1|ENSG00000167554|chr19:52366715-52366715|A/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	650.397079	1298.7796	1.9301	0.0012553	1.9251	0.0012521	3.8552	0.0025074	650.3978047425961	95.677	0.21	95.677	95.511	95.721	0	0.019766	-0.00014303	NaN	1.8442	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	642580			24778	17370	12322	12377							0.14216611762162756
PHLVKQPSI	9	Unmodified	_PHLVKQPSI_					0	0	0			REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	REV__nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8050109744072	2	509.805834	1017.59712	2.3305	0.0011881	-3.6684	-0.0018702	-1.3379	-0.00068208	509.80371967341677	82.144	0.66705	82.144	81.701	82.368	0					41	21	3	0	0	0	0.76456	1	34248	34248		4.756	0	1	3248300	+		24779	11501	12323	12378	28522	28522					0.08902039576844345
PHLVLAPM	8	Unmodified	_PHLVLAPM_					0	0	0			REV__chr3:54634565-54637674|291|36.16|0.21|7.42|-|2|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|5	REV__chr3:54634565-54637674|291|36.16|0.21|7.42|-|2|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2537414431572	2	439.251849	876.489145	2.8428	0.0012487	1.7463	0.00076709	4.5891	0.0020158	439.25201476063216	72.378	0.45927	73.708	73.423	73.883	1.3298					36	14	3	0	0	0	0.88958	1	30430	30430		2.8892	0	1	5635700	+		24780	8319	12324	12379	28523	28523					0.04595951721921665
PHLVLLLLQLY	11	Unmodified	_PHLVLLLLQLY_					0	0	0			REV__chr11:836153-836769|135|25.36|0.76|5.05|+|2|CD151,CD151|1	REV__chr11:836153-836769|135|25.36|0.76|5.05|+|2|CD151,CD151|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	661.4135009646416	2	661.415749	1320.81694	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108	1	108.16	107.66	108.66	0.15795								0	0	0	0.63775	1	46540	46540		1.4819	1.1313	1		+		24781	8243	12325	12380	28524	28524					0.16936845464601902
PHMHGGHL	8	Unmodified	_PHMHGGHL_					0	0	0		ENSG00000142599|ENST00000400908|RERE;nc|ENSG00000142599|Q9P2R6-2|RERE	ENSG00000142599|ENST00000400908|RERE	ENSG00000142599|ENST00000400908|RERE	MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2123290896416	2	443.211047	884.40754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.314	1	35.613	35.113	36.113	0.29942								0	0	0	1.0178	1	14837	14837		2.8892	0	1				24782	3000	12326	12381	28525	28525					-0.03928730917300527
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1603576540947	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.083	1	18.256	17.756	18.756	0.17285								0	0	0	1.0178	1	7505	7505		1.8442	0	1				24783	121	12327	12382	28526	28526					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1602050662041	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.177	1	18.349	17.849	18.849	0.17285								0	0	0	1.0178	1	7544	7544		1.8442	0	1				24784	121	12327	12382	28527	28527					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1602661013603	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.279	1	18.452	17.952	18.952	0.17285								0	0	0	1.0178	1	7587	7587		1.8442	0	1				24785	121	12327	12382	28528	28528					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1602966189384	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.372	1	18.545	18.045	19.045	0.17285								0	0	0	1.0178	1	7626	7626		1.8442	0	1				24786	121	12327	12382	28529	28529					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1601745486259	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.479	1	18.652	18.152	19.152	0.17285								0	0	0	1.0178	1	7671	7671		1.8442	0	1				24787	121	12327	12382	28530	28530					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1601745486259	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.597	1	18.77	18.27	19.27	0.17285								0	0	0	1.0178	1	7720	7720		1.8442	0	1				24788	121	12327	12382	28531	28531					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1602966189384	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.72	1	18.893	18.393	19.393	0.17285								0	0	0	1.0178	1	7771	7771		1.8442	0	1				24789	121	12327	12382	28532	28532					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1601745486259	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.843	1	19.037	18.537	19.537	0.19342								0	0	0	1.0178	1	7822	7822		1.8442	0	1				24790	121	12327	12382	28533	28533					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1598388552666	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.934	1	19.127	18.627	19.627	0.19342								0	0	0	1.0178	1	7861	7861		1.8442	0	1				24791	121	12327	12382	28534	28534					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1599609255791	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.026	1	19.219	18.719	19.719	0.19342								0	0	0	1.0178	1	7900	7900		1.8442	0	1				24792	121	12327	12382	28535	28535					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1603271365166	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.123	1	19.317	18.817	19.817	0.19342								0	0	0	1.0178	1	7941	7941		1.8442	0	1				24793	121	12327	12382	28536	28536					-0.03250451733936188
PHMIEDIQ	8	Unmodified	_PHMIEDIQ_					0	0	0		CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant;ENSG00000132906|ENST00000333868|CASP9;nc|ENSG00000132906|P55211-3|CASP9;nc|ENSG00000132906|P55211-2|CASP9	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	CASP9|p.R193Pfs*113|1|0.04|ENSG00000132906|chr1:15506951-15506952|-/CAAGGGTGTTTTGGACACAAGAAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1605102419853	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.229	1	19.422	18.922	19.922	0.19342								0	0	0	1.0178	1	7985	7985		1.8442	0	1				24794	121	12327	12382	28537	28537					-0.03250451733936188
PHNVLQRI	8	Unmodified	_PHNVLQRI_					0	0	0			REV__ENSG00000095777|ENST00000642920|MYO3A	REV__ENSG00000095777|ENST00000642920|MYO3A	MSMS	GG20161007_CRH_Patient100_W632_01	3	326.1950866580009	3	326.194409	975.561398	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.37	1	102.54	102.04	103.04	0.17032								0	0	0	1.0178	1	43084	43084		0.45834	0	1		+		24795	8933	12328	12383	28538	28538					0.07264002119836732
PHPAGRRH	8	Unmodified	_PHPAGRRH_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.2548400759697	2	464.254634	926.494716	2.0452	0.00094949	-1.2216	-0.00056715	0.82356	0.00038234	464.25401492972026	79.131	0.48125	79.131	78.877	79.359	0					41	15	4	0	0	0	0.88958	1	32988	32988		2.8892	0	1	7403900	+		24796	11347	12329	12384	28539	28539					0.02852811348589057
PHPAGRRH	8	Unmodified	_PHPAGRRH_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.2552062869072	2	464.254634	926.494716	2.383	0.0011063	-1.3451	-0.00062447	1.0379	0.00048186	464.2539972083779	79.053	0.55315	79.354	79.07	79.623	0.30052					46	17	5	0	0	0	0.88958	2	33070	33070;33110		2.8892	0	1	10212000	+		24797	11347	12329	12384	28540;28541	28540					0.02852811348589057
PHPAGRRH	8	Unmodified	_PHPAGRRH_					0	0	0			REV__nc|ENSG00000182329|Q0VF49|KIAA2012	REV__nc|ENSG00000182329|Q0VF49|KIAA2012	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2555419802666	2	464.254634	926.494716	2.0262	0.00094067	-1.1346	-0.00052675	0.89158	0.00041392	464.2540927791477	78.01	0.49881	79.761	79.495	79.994	1.7514					40	15	3	0	0	0	0.88958	2	32675	32675;32722		2.8892	0	1	5994900	+		24798	11347	12329	12384	28542;28543	28542					0.02852811348589057
PHPLLLPPR	9	Unmodified	_PHPLLLPPR_					0	0	0			REV__ENST00000304129.8_1_10:116064481-116064646:-|nuORF	REV__ENST00000304129.8_1_10:116064481-116064646:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2202636599541	3	347.218555	1038.63383	1.4928	0.00051833	2.2424	0.00077859	3.7352	0.0012969	347.21982630972025	44.649	0.48042	46.608	46.448	46.928	1.9596					37	14	3	0	0	0	0.82604	1	18764	18764		1.1933	0	1	2116600	+		24799	12328	12330	12385	28544	28544					0.11606336193403877
PHPLLLPPRPQ	11	Unmodified	_PHPLLLPPRPQ_					0	0	0			REV__ENST00000304129.8_1_10:116064481-116064646:-|nuORF	REV__ENST00000304129.8_1_10:116064481-116064646:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2556640505791	3	422.255669	1263.74518	2.9221	0.0012339	-2.6454	-0.001117	0.27669	0.00011683	422.58780465673277	89.992	0.41933	90.201	89.92	90.34	0.20904					29	12	3	0	0	0	1.0388	1	37741	37741		0.50596	0.051438	1	1206800	+		24800	12328	12331	12386	28545	28545					0.12385350830686548
PHPLPLLVVV	10	Unmodified	_PHPLPLLVVV_					0	0	0		ENST00000406477.7_1_22:44564572-44564755:+|nuORF	ENST00000406477.7_1_22:44564572-44564755:+|nuORF	ENST00000406477.7_1_22:44564572-44564755:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	362.7023803591728	3	361.902344	1082.6852	-0.54348	-0.00019669	1.1059	0.00040024	0.56246	0.00020355	361.9026475590515	63.115	0.59635	63.115	62.707	63.304	0					27	18	2	0	0	0	0.12545	1	26260	26260		4.1895	2.7076	1	447350			24801	6364	12332	12387	28546	28546					0.1471666016745985
PHPLQRLRVPP	11	Unmodified	_PHPLQRLRVPP_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2019225955009	4	328.201745	1308.77787	0.88873	0.00029168	0.9638	0.00031632	1.8525	0.000608	328.20165622248624	37.018	0.62138	37.323	37.048	37.67	0.30497					89	31	4	0	0	0	1.0357	1	15531	15531		1.4551	0.12547	1	12820000			24802	1733	12333	12388	28547	28547					0.13583557953529635
PHPLQRLRVPP	11	Unmodified	_PHPLQRLRVPP_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2018920779228	4	328.201745	1308.77787	-0.91981	-0.00030188	2.442	0.00080148	1.5222	0.0004996	328.2024015032017	35.144	0.44951	36.418	36.233	36.682	1.2746					95	41	3	0	0	0	1.0191	1	14747	14747		2.6312	0.19645	1	13513000			24803	1733	12333	12388	28548	28548					0.13583557953529635
PHPLQRLRVPP	11	Unmodified	_PHPLQRLRVPP_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2021362185478	4	328.201745	1308.77787	-0.66977	-0.00021982	2.7148	0.00089101	2.045	0.00067119	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	1.0191	1	15618	15618		2.6312	0.54727	1	30589000			24804	1733	12333	12388	28549	28549					0.13583557953529635
PHPLQRLRVPP	11	Unmodified	_PHPLQRLRVPP_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.4529601931572	4	328.201745	1308.77787	0.18251	5.9899E-05	1.2546	0.00041177	1.4371	0.00047167	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	1.0191	1	15348	15348		2.6312	0.19645	1	36142000			24805	1733	12333	12388	28550	28550					0.13583557953529635
PHPLVRPLP	9	Unmodified	_PHPLVRPLP_					0	0	0			REV__ENST00000576012.5_1_17:1538054-1543444:-|nuORF	REV__ENST00000576012.5_1_17:1538054-1543444:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.1989623904228	3	342.546671	1024.61818	-0.066538	-2.2792E-05	1.4305	0.00049001	1.3639	0.00046722	342.54697399765723	20.154	0.42068	21.701	21.463	21.884	1.5471					22	13	2	0	0	0	0.11938	1	8455	8455		1.1933	0	1	484110	+		24806	13983	12334	12389	28551	28551					0.10686049676360199
PHPPGGHM	8	Unmodified	_PHPPGGHM_					0	0	0			REV__ENST00000488550.5_1_2:66798235-66798658:+|nuORF	REV__ENST00000488550.5_1_2:66798235-66798658:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.1950866580009	2	415.192322	828.370092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.159	1	94.304	93.804	94.804	0.14493								0	0	0	1.0178	1	39409	39409		0.79363	0	1		+		24807	13412	12335	12390	28552	28552					-0.05095822182943266
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7789794802666	2	465.779619	929.544686	2.6655	0.0012415	-3.3991	-0.0015832	-0.73366	-0.00034172	465.7776766402062	75.844	0.73853	77.138	76.603	77.341	1.2938					43	23	3	0	0	0	0.88958	2	31828	31783;31828		2.8892	0	1	2588300	+		24808	13190	12336	12391	28553;28554	28554					0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7792541384697	2	465.779619	929.544686	2.7883	0.0012987	-3.3083	-0.0015409	-0.51999	-0.0002422	465.77775224257675	76.704	0.56284	77.998	77.731	78.294	1.2938					37	17	3	0	0	0	0.88958	3	32156	32156;32203;32244		2.8892	0	1	7139700	+		24809	13190	12336	12391	28555;28556;28557	28555					0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7786743044853	2	465.779619	929.544686	3.0145	0.0014041	-2.7791	-0.0012944	0.2354	0.00010964	465.777546587963	76.388	0.47771	78.155	77.909	78.386	1.7672					45	14	4	0	0	0	0.88504	2	32072	32021;32072		5.7604	0	1	6750400	+		24810	13190	12336	12391	28558;28559	28559					0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	465.779619	929.544686	2.1546	0.0010036	-3.8989	-0.001816	-1.7443	-0.00081245	465.7774171423871	76.866	0.7535	76.866	76.373	77.127	0	-0.22003	-5.8176E-05	NaN	2.8892	45	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4562800	+		24811	13190	12336	12391							0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	465.779619	929.544686	2.7883	0.0012987	-3.3083	-0.0015409	-0.51999	-0.0002422	465.77775224257675	76.704	0.56284	77.998	77.731	78.294	1.2938	0.06533	0.00089747	NaN	5.7604	37	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7139700	+		24812	13190	12336	12391							0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	465.779619	929.544686	2.6655	0.0012415	-3.3991	-0.0015832	-0.73366	-0.00034172	465.7776766402062	75.844	0.73853	77.138	76.603	77.341	1.2938	0.051845	0.00040737	NaN	2.8892	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2588300	+		24813	13190	12336	12391							0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.779619	929.544686	3.0145	0.0014041	-2.7791	-0.0012944	0.2354	0.00010964	465.777546587963	76.388	0.47771	78.155	77.909	78.386	1.7672	0.22265	0.0013905	NaN	5.7604	45	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6750400	+		24814	13190	12336	12391							0.07709501233875926
PHPPLRLT	8	Unmodified	_PHPPLRLT_					0	0	0			REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	REV__ENST00000460783.1_1_21:38072046-38081802:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.779619	929.544686	3.0393	0.0014156	-4.1329	-0.001925	-1.0937	-0.00050941	465.7771716310955	75.506	0.73253	77.288	76.76	77.493	1.7817	0.20151	-0.00027623	NaN	2.8892	41	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2528600	+		24815	13190	12336	12391							0.07709501233875926
PHPPPACL	8	Unmodified	_PHPPPACL_					0	0	0			REV__ENSG00000189120|ENST00000536300|SP6	REV__ENSG00000189120|ENST00000536300|SP6	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2134582400322	2	416.212724	830.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.774	1	27.774	27.274	28.274	0								0	0	0	1.0178	1	11618	11618		2.8892	0	1		+		24816	11604	12337	12392	28560	28560					-0.011094808633401954
PHPPPACL	8	Unmodified	_PHPPPACL_					0	0	0			REV__ENSG00000189120|ENST00000536300|SP6	REV__ENSG00000189120|ENST00000536300|SP6	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2122375369072	2	416.212724	830.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.175	1	28.175	27.675	28.675	0								0	0	0	1.0178	1	11790	11790		2.8892	0	1		+		24817	11604	12337	12392	28561	28561					-0.011094808633401954
PHPPPACL	8	Unmodified	_PHPPPACL_					0	0	0			REV__ENSG00000189120|ENST00000536300|SP6	REV__ENSG00000189120|ENST00000536300|SP6	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2130309939384	2	416.212724	830.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.384	1	28.384	27.884	28.884	0								0	0	0	1.0178	1	11877	11877		2.8892	0	1		+		24818	11604	12337	12392	28562	28562					-0.011094808633401954
PHPPPACL	8	Unmodified	_PHPPPACL_					0	0	0			REV__ENSG00000189120|ENST00000536300|SP6	REV__ENSG00000189120|ENST00000536300|SP6	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2124206423759	2	416.212724	830.410894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.541	1	28.541	28.041	29.041	0								0	0	0	1.0178	1	11943	11943		2.8892	0	1		+		24819	11604	12337	12392	28563	28563					-0.011094808633401954
PHPPSSRQ	8	Unmodified	_PHPPSSRQ_					0	0	0			REV__ENST00000585058.1_1_17:29850640-29851216:+|nuORF	REV__ENST00000585058.1_1_17:29850640-29851216:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.2328674197197	2	453.233033	904.451513	2.938	0.0013316	-2.237	-0.0010139	0.70105	0.00031774	453.23233638272313	75.168	0.27928	76.95	76.76	77.04	1.7817					11	8	2	0	0	0	0.88163	1	31531	31531		7.9102	0	1	667020	+		24820	14015	12338	12393	28564	28564					-0.004534232193350363
PHPRPCGR	8	Unmodified	_PHPRPCGR_					0	0	0			REV__ENST00000591490.5_1_17:40821740-40828722:-|nuORF	REV__ENST00000591490.5_1_17:40821740-40828722:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	460.2391540408134	2	460.237596	918.460638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.108	1	35.931	35.431	36.431	1.8227								0	0	0	1.0178	1	14304	14304		2.8892	0	1		+		24821	14071	12339	12394	28565	28565					-0.0018535313465690706
PHPRPRARLR	10	Unmodified	_PHPRPRARLR_					0	0	0			REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	REV__ENST00000534680.5_1_8:145751978-145752622:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3834106326103	2	628.383971	1254.75339	2.1702	0.0013637	-1.8543	-0.0011652	0.31591	0.00019851	628.3827074728345	93.849	0.37878	93.849	93.615	93.994	0					20	11	2	0	0	0	0.89646	1	39177	39177		1.8442	0	1	856560	+		24822	13733	12340	12395	28566	28566					0.13620342590661494
PHPRRGRV	8	Unmodified	_PHPRRGRV_					0	0	0			REV__chr11:67584169-67584712|115|282.59|0.12|11.15|+|2|GSTP1,None|1	REV__chr11:67584169-67584712|115|282.59|0.12|11.15|+|2|GSTP1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7917358279228	2	487.791384	973.568215	2.8248	0.0013779	-1.2947	-0.00063157	1.5301	0.00074636	487.7905339667355	79.408	0.47064	80.659	80.424	80.895	1.2512					35	14	3	0	0	0	0.88504	1	33387	33387		5.7604	2.8712	1	5874400	+		24823	8242	12341	12396	28567	28567					0.0803735979108069
PHPRRGRV	8	Unmodified	_PHPRRGRV_					0	0	0			REV__chr11:67584169-67584712|115|282.59|0.12|11.15|+|2|GSTP1,None|1	REV__chr11:67584169-67584712|115|282.59|0.12|11.15|+|2|GSTP1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7912170290947	2	487.791384	973.568215	1.9683	0.00096013	-0.86946	-0.00042412	1.0988	0.00053601	487.79079675310646	79.096	0.49709	80.831	80.567	81.064	1.735					36	15	3	0	0	0	0.88504	1	33217	33217		5.7604	1.0044	1	4412600	+		24824	8242	12341	12396	28568	28568					0.0803735979108069
PHQQAAAW	8	Unmodified	_PHQQAAAW_					0	0	0			REV__ENST00000366746.7_1_1:228295970-228296999:-|nuORF	REV__ENST00000366746.7_1_1:228295970-228296999:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	454.7544738650322	2	454.722301	907.43005	1.8722	0.00085133	4.0789	0.0018547	5.9511	0.0027061	454.7247790865084	74.876	0.28169	74.876	74.683	74.965	0					14	8	2	0	0	0	2.3239	1	31174	31174		0.79363	0	1	449120	+		24825	12611	12342	12397	28569	28569					-0.027368082480620615
PHQQAPPG	8	Unmodified	_PHQQAPPG_					0	0	0			REV__ENST00000479371.5_1_9:139693557-139694166:+|nuORF	REV__ENST00000479371.5_1_9:139693557-139694166:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2128173708916	2	416.209027	830.403501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.914	1	27.174	26.674	27.674	1.2594								0	0	0	1.0178	1	10853	10853		2.8892	0	1		+		24826	13335	12343	12398	28570	28570					-0.018484971393831984
PHRHRGKG	8	Unmodified	_PHRHRGKG_					0	0	0		ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7653991580009	2	472.767909	943.521265	2.4624	0.0011641	-3.0896	-0.0014607	-0.62724	-0.00029654	472.76642897865975	79.115	0.37291	79.416	79.217	79.59	0.30047					36	11	4	0	0	0	0.88958	1	33049	33049		2.8892	0.58649	1	10400000			24827	6605	12344	12399	28571	28571					0.04724500239944973
PHRHRGKG	8	Unmodified	_PHRHRGKG_					0	0	0		ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7686035037041	2	472.767909	943.521265	2.7522	0.0013011	-1.8364	-0.00086821	0.91571	0.00043292	472.76691574659435	78.292	0.45394	79.559	79.363	79.817	1.2668					47	14	4	0	0	0	0.88958	1	32908	32908		2.8892	0.58649	1	13883000			24828	6605	12344	12399	28572	28572					0.04724500239944973
PHRHRGKG	8	Unmodified	_PHRHRGKG_					0	0	0		ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	ENST00000450554.6_1_19:56185583-56185769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7670165896416	2	472.767909	943.521265	2.0264	0.000958	-1.365	-0.00064532	0.66139	0.00031268	472.7671150445591	78.01	0.49881	79.761	79.495	79.994	1.7514					51	15	4	0	0	0	0.88958	4	32663	32663;32708;32745;32785		2.8892	2.8892	1	12252000			24829	6605	12344	12399	28573;28574;28575;28576	28573					0.04724500239944973
PHRKHKDK	8	Unmodified	_PHRKHKDK_					0	0	0		ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	ENSG00000160218|ENST00000291574|TRAPPC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3053466677666	2	523.304324	1044.5941	2.6644	0.0013943	-0.35056	-0.00018345	2.3138	0.0012108	523.3039889524337	84.386	0.47824	84.647	84.376	84.854	0.26083					29	14	3	0	0	0	0.89176	1	35301	35301		0.79363	0.10326	1	1226000			24830	3549	12345	12400	28577	28577					0.07358209242693192
PHRKREGPI	9	Unmodified	_PHRKREGPI_					0	0	0		ENSG00000214338|ENST00000525778|SOGA3	ENSG00000214338|ENST00000525778|SOGA3	ENSG00000214338|ENST00000525778|SOGA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3185912966728	2	545.317432	1088.62031	2.3261	0.0012685	0.2022	0.00011026	2.5283	0.0013787	545.3173703630918	87.567	0.3809	87.567	87.378	87.759	0					31	12	3	0	0	0	0.82604	1	36600	36600		2.3027	0	1	7208500			24831	5240	12346	12401	28578	28578					0.07954478414194455
PHRKREGPI	9	Unmodified	_PHRKREGPI_					0	0	0		ENSG00000214338|ENST00000525778|SOGA3	ENSG00000214338|ENST00000525778|SOGA3	ENSG00000214338|ENST00000525778|SOGA3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	545.317432	1088.62031	2.5934	0.0014142	0.80991	0.00044166	3.4033	0.0018559	545.317790708254	87.48	0.42805	87.715	87.518	87.946	0.23471	0.074225	0.00032732	NaN	2.3027	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4379500			24832	5240	12346	12401							0.07954478414194455
PHRLSTRQV	9	Unmodified	_PHRLSTRQV_					0	0	0			REV__ENST00000255890.8_1_22:23744057-23744278:-|nuORF	REV__ENST00000255890.8_1_22:23744057-23744278:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3185302615166	2	547.314889	1092.61522	2.382	0.0013037	3.5593	0.001948	5.9412	0.0032517	547.3170248469756	86.708	0.36869	86.708	86.519	86.888	0					24	13	3	0	0	0	0.66839	1	36151	36151		8.5933	0.68312	1	5525800	+		24833	12161	12347	12402	28579	28579					0.072621745515562
PHRRAKKYAR	10	Unmodified	_PHRRAKKYAR_					0	0	0			REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8851806521416	2	641.883804	1281.75306	1.9441	0.0012479	0.51185	0.00032855	2.456	0.0015765	641.8841933064444	95.625	0.23829	95.625	95.483	95.721	0					12	7	2	0	0	0	0.89646	1	39964	39964		1.8442	0.36234	1	806130	+		24834	12286	12348	12403	28580	28580					0.12344922870829578
PHRRAKKYAR	10	Unmodified	_PHRRAKKYAR_					0	0	0			REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8865844607353	2	641.883804	1281.75306	2.6142	0.001678	1.4891	0.00095583	4.1033	0.0026338	641.8842709306498	95.526	0.18246	95.649	95.559	95.741	0.12331					10	5	2	0	0	0	0.89646	1	39990	39990		1.8442	0.36234	1	868790	+		24835	12286	12348	12403	28581	28581					0.12344922870829578
PHRRAKKYAR	10	Unmodified	_PHRRAKKYAR_					0	0	0			REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	641.883804	1281.75306	1.9441	0.0012479	0.51185	0.00032855	2.456	0.0015765	641.8841933064444	95.625	0.23829	95.625	95.483	95.721	0	-0.011751	-0.00039166	NaN	1.8442	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	806130	+		24836	12286	12348	12403							0.12344922870829578
PHRRAKKYAR	10	Unmodified	_PHRRAKKYAR_					0	0	0			REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	REV__ENST00000294072.8_2_11:61125283-61129469:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	641.883804	1281.75306	2.6142	0.001678	1.4891	0.00095583	4.1033	0.0026338	641.8842709306498	95.526	0.18246	95.649	95.559	95.741	0.12331	0.011751	0.0008629	NaN	1.8442	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	868790	+		24837	12286	12348	12403							0.12344922870829578
PHRRLRDL	8	Unmodified	_PHRRLRDL_					0	0	0		LAMA5-C20orf151|1|fusion;LAMA5-GRB7|1|fusion	LAMA5-C20orf151|1|fusion	LAMA5-C20orf151|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.8180419802666	2	531.817599	1061.62064	2.537	0.0013492	-1.3258	-0.00070508	1.2112	0.00064416	531.8168296635453	85.276	0.4718	85.276	85.068	85.54	0					43	14	4	0	0	0	0.88958	2	35508	35508;35560		2.8892	0	1	8662800			24838	7781	12349	12404	28582;28583	28582					0.09229898134026371
PHRRLRDL	8	Unmodified	_PHRRLRDL_					0	0	0		LAMA5-C20orf151|1|fusion;LAMA5-GRB7|1|fusion	LAMA5-C20orf151|1|fusion	LAMA5-C20orf151|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.8181030154228	2	531.817599	1061.62064	2.6736	0.0014219	-1.5567	-0.0008279	1.1168	0.00059396	531.8166685499672	85.182	0.46762	85.434	85.165	85.632	0.25227					45	14	4	0	0	0	0.88958	2	35583	35583;35636		2.8892	0	1	6851800			24839	7781	12349	12404	28584;28585	28584					0.09229898134026371
PHRRLRDL	8	Unmodified	_PHRRLRDL_					0	0	0		LAMA5-C20orf151|1|fusion;LAMA5-GRB7|1|fusion	LAMA5-C20orf151|1|fusion	LAMA5-C20orf151|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8184692263603	2	531.817599	1061.62064	2.3963	0.0012744	-2.0863	-0.0011095	0.31002	0.00016488	531.8162661337498	84.147	0.33775	85.785	85.623	85.96	1.6379					22	10	3	0	0	0	0.88958	1	35291	35291		2.8892	0	1	3112400			24840	7781	12349	12404	28586	28586					0.09229898134026371
PHRRLSPR	8	Unmodified	_PHRRLSPR_					0	0	0			REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8048889040947	2	509.804491	1017.59443	2.3305	0.0011881	-1.0347	-0.00052752	1.2958	0.00066059	509.80371967341677	82.144	0.66705	82.144	81.701	82.368	0					41	21	3	0	0	0	0.88958	2	34197	34148;34197		2.8892	0	1	3248300	+		24841	13851	12350	12405	28587;28588	28588					0.08633628962547846
PHRRLSPR	8	Unmodified	_PHRRLSPR_					0	0	0			REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8057433962822	2	509.804491	1017.59443	2.4342	0.001241	-1.1975	-0.00061049	1.2367	0.00063049	509.8036401741378	82.909	0.49149	82.909	82.646	83.138	0					41	15	4	0	0	0	0.88958	3	34482	34482;34532;34584		2.8892	0	1	14033000	+		24842	13851	12350	12405	28589;28590;28591	28589					0.08633628962547846
PHRRLSPR	8	Unmodified	_PHRRLSPR_					0	0	0			REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8049804568291	2	509.804491	1017.59443	2.3155	0.0011804	-0.73671	-0.00037558	1.5788	0.00080487	509.80379789578944	81.946	0.73679	82.226	81.722	82.459	0.2802					49	23	3	0	0	0	0.88958	2	34245	34245;34296		2.8892	0	1	3485600	+		24843	13851	12350	12405	28592;28593	28592					0.08633628962547846
PHRRLSPR	8	Unmodified	_PHRRLSPR_					0	0	0			REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	REV__ENST00000554387.5_1_15:93595580-93595697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8056823611259	2	509.804491	1017.59443	2.434	0.0012409	-0.87514	-0.00044615	1.5589	0.00079473	509.8038271803489	82.77	0.51965	83.04	82.787	83.306	0.27029					49	16	4	0	0	0	0.88958	2	34559	34559;34607		2.8892	0	1	15383000	+		24844	13851	12350	12405	28594;28595	28594					0.08633628962547846
PHRRQDPK	8	Unmodified	_PHRRQDPK_					0	0	0		ENST00000398495.6_1_18:47803541-47806282:-|nuORF	ENST00000398495.6_1_18:47803541-47806282:-|nuORF	ENST00000398495.6_1_18:47803541-47806282:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2868530154228	2	517.286131	1032.55771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.192	1	42.192	41.692	42.692	0								0	0	0	1.0178	1	17658	17658		2.8892	0	1				24845	6324	12351	12406	28596	28596					0.04273332345997005
PHRRRLLD	8	Unmodified	_PHRRRLLD_					0	0	0			REV__ENST00000562859.5_2_15:42565693-42566462:+|nuORF	REV__ENST00000562859.5_2_15:42565693-42566462:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8206664919853	2	531.817599	1061.62064	1.8617	0.00099006	1.3892	0.00073883	3.2509	0.0017289	531.8184706122922	84.443	0.4111	85.602	85.402	85.814	1.159					24	12	3	0	0	0	0.88958	1	35428	35428		2.8892	0	1	3454500	+		24846	13903	12352	12407	28597	28597					0.09229898134049108
PHRRSRLQ	8	Unmodified	_PHRRSRLQ_					0	0	0			REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3049194216728	2	525.307398	1048.60024	2.5546	0.0013419	-2.2279	-0.0011704	0.32662	0.00017158	525.3059040956764	84.322	0.37427	84.322	84.151	84.526	0					31	11	3	0	0	0	0.88958	2	35110	35110;35157		2.8892	0	1	5548800	+		24847	11797	12353	12408	28598;28599	28598					0.07788727474235202
PHRRSRLQ	8	Unmodified	_PHRRSRLQ_					0	0	0			REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	REV__nc|ENSG00000204681|Q9UBS5-2|GABBR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3074218630791	2	525.307398	1048.60024	2.6448	0.0013893	-1.4728	-0.0007737	1.1719	0.00061563	525.3063396038295	84.16	0.4451	84.421	84.248	84.693	0.26083					38	13	4	0	0	0	0.88958	2	35231	35231;35271		2.8892	0	1	4336200	+		24848	11797	12353	12408	28600;28601	28600					0.07788727474235202
PHRSRRPL	8	Unmodified	_PHRSRRPL_					0	0	0			REV__ENST00000598675.1_1_19:7997268-7998765:-|nuORF	REV__ENST00000598675.1_1_19:7997268-7998765:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8064147830009	2	509.804491	1017.59443	3.4293	0.0017483	-0.38745	-0.00019752	3.0419	0.0015508	509.80380957741875	81.107	0.49179	82.341	82.041	82.533	1.2332					26	15	2	0	0	0	0.88409	1	34006	34006		6.3541	1.1234	1	1597200	+		24849	14109	12354	12409	28602	28602					0.08633628962559214
PHRVKTERK	9	Unmodified	_PHRVKTERK_					0	0	0		ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8450195193291	2	575.843813	1149.67307	2.2868	0.0013169	-1.1377	-0.00065517	1.1491	0.0006617	575.8431857012017	89.13	0.38255	89.13	88.859	89.241	0					21	11	2	0	0	0	0.84963	1	37269	37269		0.6015	0	1	1109800			24850	7251	12355	12410	28603	28603					0.10422436476960684
PHRVKTERK	9	Unmodified	_PHRVKTERK_					0	0	0		ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8453857302666	2	575.843813	1149.67307	2.5106	0.0014457	-0.47822	-0.00027538	2.0324	0.0011703	575.8433793149931	89.636	0.41656	89.86	89.647	90.063	0.2236					35	12	3	0	0	0	0.82604	3	37531	37531;37582;37624		2.3027	0	1	3153900			24851	7251	12355	12410	28604;28605;28606	28604					0.10422436476960684
PHRVKTERK	9	Unmodified	_PHRVKTERK_					0	0	0		ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	ENST00000548758.1_1_14:36295674-36335014:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	575.843813	1149.67307	5.3336	0.0030713	-2.4097	-0.0013876	2.9239	0.0016837	575.8425010982871	88.169	0.25629	89.225	89.08	89.337	1.0562	0.056747	-0.0019025	NaN	0.6015	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	403730			24852	7251	12355	12410							0.10422436476960684
PHRVPRLM	8	Unmodified	_PHRVPRLM_					0	0	0		ENST00000576916.5_2_16:3526313-3529494:+|nuORF	ENST00000576916.5_2_16:3526313-3529494:+|nuORF	ENST00000576916.5_2_16:3526313-3529494:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2934142947197	2	503.292371	1004.57019	3.1355	0.0015781	-1.1695	-0.00058859	1.966	0.00098948	503.292574074481	80.977	0.51875	82.21	81.953	82.471	1.2332					40	16	4	0	0	0	0.88409	1	33945	33945		6.3541	1.5981	1	11241000			24853	7414	12356	12411	28607	28607					0.06808652484676259
PHRVPRLM	8	Unmodified	_PHRVPRLM_					0	0	0		ENST00000576916.5_2_16:3526313-3529494:+|nuORF	ENST00000576916.5_2_16:3526313-3529494:+|nuORF	ENST00000576916.5_2_16:3526313-3529494:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2946655154228	2	503.292371	1004.57019	1.8031	0.00090747	0.80314	0.00040422	2.6062	0.0013117	503.29361784486184	80.653	0.51907	82.349	82.091	82.61	1.6959					47	16	4	0	0	0	0.88958	1	33840	33840		2.8892	0	1	8973500			24854	7414	12356	12411	28608	28608					0.06808652484676259
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7918578982353	2	487.791384	973.568215	1.7067	0.00083251	-1.0059	-0.00049066	0.7008	0.00034184	487.7905818605006	79.62	0.71262	79.62	79.113	79.826	0					50	22	3	0	0	0	0.88504	1	33132	33132		5.7604	2.8712	1	3435000			24855	489	12357	12412	28609	28609					0.0803735979108069
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7916442751884	2	487.791384	973.568215	1.8129	0.00088433	-0.95438	-0.00046554	0.85854	0.00041879	487.79088061961113	80.402	0.65707	80.402	80.009	80.666	0					52	20	4	0	0	0	0.88504	2	33493	33455;33493		5.7604	2.8712	1	13946000			24856	489	12357	12412	28610;28611	28611					0.0803735979108069
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7921630740166	2	487.791384	973.568215	2.489	0.0012141	-1.0562	-0.00051519	1.4328	0.00069891	487.7906989832591	79.466	0.69469	79.766	79.247	79.942	0.30047					48	21	3	0	0	0	0.89176	1	33270	33270		0.79363	0	1	4325800			24857	489	12357	12412	28612	28612					0.0803735979108069
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7916442751884	2	487.791384	973.568215	2.6125	0.0012744	-1.7877	-0.00087204	0.82479	0.00040232	487.7904007373101	80.222	0.56081	80.523	80.258	80.819	0.30046					47	17	4	0	0	0	0.88958	3	33479	33479;33528;33578		2.8892	0	1	12753000			24858	489	12357	12412	28613;28614;28615	28613					0.0803735979108069
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7919494509697	2	487.791384	973.568215	2.8248	0.0013779	-1.2947	-0.00063157	1.5301	0.00074636	487.7905339667355	79.408	0.47064	80.659	80.424	80.895	1.2512					35	14	3	0	0	0	0.88958	2	33295	33295;33336		2.8892	0	1	5874400			24859	489	12357	12412	28616;28617	28616					0.0803735979108069
PHRVRGPR	8	Unmodified	_PHRVRGPR_					0	0	0		nc|ENSG00000005436|P16383-2|GCFC2;ENSG00000005436|ENST00000321027|GCFC2;nc|ENSG00000005436|P16383-3|GCFC2;nc|ENSG00000005436|P16383-4|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	nc|ENSG00000005436|P16383-2|GCFC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7917358279228	2	487.791384	973.568215	1.9683	0.00096013	-0.86946	-0.00042412	1.0988	0.00053601	487.79079675310646	79.096	0.49709	80.831	80.567	81.064	1.735					36	15	3	0	0	0	0.88504	1	33166	33166		5.7604	0	1	4412600			24860	489	12357	12412	28618	28618					0.0803735979108069
PHRYCWVWR	9	Unmodified	_PHRYCWVWR_					0	0	0		ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823730349541	3	434.881948	1301.62402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.805	1	4.893	4.393	5.393	0.08803								0	0	0	0.42693	1	1986	1986		0.26902	0	1				24861	6782	12358	12413	28619	28619					-0.014731750836517676
PHRYCWVWR	9	Unmodified	_PHRYCWVWR_					0	0	0		ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827392458916	3	434.881948	1301.62402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2797	1	8.0104	7.5104	8.5104	0.73074								0	0	0	0.42693	1	3024	3024		0.26902	0	1				24862	6782	12358	12413	28620	28620					-0.014731750836517676
PHRYCWVWR	9	Unmodified	_PHRYCWVWR_					0	0	0		ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	ENST00000475983.1_1_19:40877588-40880546:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8832580447197	3	434.881948	1301.62402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.345	1	13.132	12.632	13.632	0.78751								0	0	0	0.42693	1	5124	5124		1.0715	0.29493	1				24863	6782	12358	12413	28621	28621					-0.014731750836517676
PHSHGLLA	8	Unmodified	_PHSHGLLA_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2273132205009	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.767	1	27.483	26.983	27.983	1.7167								0	0	0	1.0178	1	10774	10774		2.8892	0	1				24864	3359	12359	12414	28622	28622					0.01788379757340408
PHSKRTSK	8	Unmodified	_PHSKRTSK_					0	0	0		ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1806823611259	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.365	1	16.365	15.865	16.865	0								0	0	0	1.0178	1	6794	6794		0.45834	0	1				24865	6455	12360	12415	28623	28623					0.05283125223149909
PHSKRTSK	8	Unmodified	_PHSKRTSK_					0	0	0		ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	ENST00000422939.1_1_8:116649485-116821871:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.1808349490166	3	314.182281	939.525013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.682	1	16.682	16.182	17.182	0								0	0	0	1.0178	1	6924	6924		0.45834	0	1				24866	6455	12360	12415	28624	28624					0.05283125223149909
PHSTKSAR	8	Unmodified	_PHSTKSAR_					0	0	0			REV__ZNF408|p.S32Efs*22|1|0.08|ENSG00000175213|chr11:46701437-46701440|CCTT/-|frameshift_variant	REV__ZNF408|p.S32Efs*22|1|0.08|ENSG00000175213|chr11:46701437-46701440|CCTT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.2415038943291	2	442.240858	882.467164	2.7426	0.0012129	-0.31355	-0.00013866	2.4291	0.0010742	442.24062434511205	76.177	0.5186	76.499	76.272	76.791	0.32163					39	16	3	0	0	0	0.88958	2	31867	31867;31916		2.8892	0	1	8246100	+		24867	15943	12361	12416	28625;28626	28625					0.021228632976999506
PHTDIKRRK	9	Unmodified	_PHTDIKRRK_					0	0	0			REV__nc|ENSG00000125676|Q8NI27-2|THOC2	REV__nc|ENSG00000125676|Q8NI27-2|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8453857302666	2	575.843813	1149.67307	2.2096	0.0012724	0.11588	6.673E-05	2.3255	0.0013391	575.8434853845099	89.794	0.41097	89.794	89.558	89.969	0					33	12	3	0	0	0	0.82604	2	37475	37475;37523		2.3027	0	1	4281900	+		24868	9674	12362	12417	28627;28628	28627					0.10422436476983421
PHTDIKRRK	9	Unmodified	_PHTDIKRRK_					0	0	0			REV__nc|ENSG00000125676|Q8NI27-2|THOC2	REV__nc|ENSG00000125676|Q8NI27-2|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8450195193291	2	575.843813	1149.67307	2.4998	0.0014395	0.15635	9.0034E-05	2.6562	0.0015296	575.8437708644321	88.925	0.38797	89.149	88.906	89.294	0.22359					22	11	2	0	0	0	0.84963	1	37251	37251		0.6015	0	1	1035000	+		24869	9674	12362	12417	28629	28629					0.10422436476983421
PHTQRRKEI	9	Unmodified	_PHTQRRKEI_					0	0	0		ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.8332397341728	2	582.833446	1163.65234	2.2082	0.001287	-1.299	-0.00075711	0.90917	0.0005299	582.8323796370692	91.124	0.40623	91.124	90.936	91.342	0					29	12	3	0	0	0	0.82604	2	38058	38058;38110		2.3027	0.4585	1	1697300			24870	4030	12363	12418	28630;28631	28630					0.07705846097337599
PHTQRRKEI	9	Unmodified	_PHTQRRKEI_					0	0	0		ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8343994021416	2	582.833446	1163.65234	2.5323	0.0014759	-0.52292	-0.00030477	2.0094	0.0011711	582.8327417282974	91.102	0.35573	91.292	91.076	91.432	0.19042					26	10	3	0	0	0	0.82604	2	38120	38120;38168		2.3027	0.4585	1	1282900			24871	4030	12363	12418	28632;28633	28632					0.07705846097337599
PHTQRRKEI	9	Unmodified	_PHTQRRKEI_					0	0	0		ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8339721560478	2	582.833446	1163.65234	4.2417	0.0024722	-0.24139	-0.00014069	4.0003	0.0023315	582.8334067482431	90.454	0.35305	91.436	91.268	91.622	0.98157					21	10	3	0	0	0	0.82604	1	38098	38098		2.3027	0	1	1042400			24872	4030	12363	12418	28634	28634					0.07705846097337599
PHTQSELPL	9	Unmodified	_PHTQSELPL_					0	0	0			REV__ENSG00000205108|ENST00000378788|FAM205A	REV__ENSG00000205108|ENST00000378788|FAM205A	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1806518435478	3	341.181946	1020.52401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.87	1	21.87	21.37	22.37	0								0	0	0	0.42693	1	9095	9095		2.9952	1.151	1		+		24873	11810	12364	12419	28635	28635					0.0145686606357458
PHTRVKRNV	9	Unmodified	_PHTRVKRNV_					0	0	0		sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8318359255791	2	553.830706	1105.64686	2.1408	0.0011856	0.023281	1.2894E-05	2.1641	0.0011985	553.8306741234597	87.589	0.41185	87.589	87.378	87.79	0					36	13	4	0	0	0	0.82604	1	36601	36601		2.3027	0	1	6180900			24874	15974	12365	12420	28636	28636					0.09826167305527633
PHTRVKRNV	9	Unmodified	_PHTRVKRNV_					0	0	0		sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8320190310478	2	553.830706	1105.64686	2.5515	0.0014131	0.82269	0.00045563	3.3742	0.0018687	553.8309887703023	87.48	0.51859	87.715	87.46	87.978	0.23496					43	16	4	0	0	0	0.82604	2	36683	36683;36726		2.3027	0	1	5731100			24875	15974	12365	12420	28637;28638	28637					0.09826167305527633
PHTRVKRNV	9	Unmodified	_PHTRVKRNV_					0	0	0		sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1;sp|F5HC97|VPAP_HCMVMDNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL44PE=3SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	sp|P16790|VPAP_HCMVADNApolymeraseprocessivityfactorOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL44PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8326293826103	2	553.830706	1105.64686	3.6187	0.0020041	0.078738	4.3608E-05	3.6974	0.0020477	553.8302929587845	86.76	0.32166	87.852	87.685	88.006	1.0918					23	11	3	0	0	0	0.82604	1	36575	36575		2.3027	0	1	3586800			24876	15974	12365	12420	28639	28639					0.09826167305527633
PHTSSAKR	8	Unmodified	_PHTSSAKR_					0	0	0			REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2417480349541	2	442.240858	882.467164	1.5012	0.00066391	0.42839	0.00018945	1.9296	0.00085336	442.24093027017983	76.38	0.45601	76.38	76.073	76.529	0					32	14	3	0	0	0	0.88958	2	31744	31744;31795		2.8892	0	1	10378000	+		24877	15292	12366	12421	28640;28641	28640					0.021228632977113193
PHTSSAKR	8	Unmodified	_PHTSSAKR_					0	0	0			REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.2425414919853	2	442.240858	882.467164	2.83	0.0012516	0.52886	0.00023389	3.3589	0.0014854	442.2409968616687	75.445	0.58263	76.752	76.404	76.987	1.3063					43	18	3	0	0	0	0.88958	1	31646	31646		2.8892	0	1	11008000	+		24878	15292	12366	12421	28642	28642					0.021228632977113193
PHTSSAKR	8	Unmodified	_PHTSSAKR_					0	0	0			REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.2420837283134	2	442.240858	882.467164	2.8569	0.0012634	0.38863	0.00017187	3.2455	0.0014353	442.24083739466107	75.159	0.52798	76.941	76.668	77.196	1.7817					42	16	4	0	0	0	0.88958	2	31511	31511;31553		2.8892	0	1	9532700	+		24879	15292	12366	12421	28643;28644	28643					0.021228632977113193
PHTSSAKR	8	Unmodified	_PHTSSAKR_					0	0	0			REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	442.240858	882.467164	1.5012	0.00066391	0.42839	0.00018945	1.9296	0.00085336	442.24093027017983	76.38	0.45601	76.38	76.073	76.529	0	-0.26287	0.00013042	NaN	2.8892	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10378000	+		24880	15292	12366	12421							0.021228632977113193
PHTSSAKR	8	Unmodified	_PHTSSAKR_					0	0	0			REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	REV__tr|A0A553SUK0|A0A553SUK0_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_00480PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	442.240858	882.467164	2.7426	0.0012129	-0.31355	-0.00013866	2.4291	0.0010742	442.24062434511205	76.177	0.5186	76.499	76.272	76.791	0.32163	-0.14413	-0.00052581	NaN	2.8892	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8246100	+		24881	15292	12366	12421							0.021228632977113193
PHVERKIL	8	Unmodified	_PHVERKIL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3055908083916	2	496.306001	990.597449	1.8967	0.00094136	-2.4496	-0.0012158	-0.55289	-0.0002744	496.30476648409666	79.097	0.43485	80.832	80.598	81.033	1.735					24	13	3	0	0	0	0.88409	1	33170	33170		6.3541	0	1	3401200			24882	1998	12367	12422	28645	28645					0.10177459296698999
PHVETTLIT	9	Unmodified	_PHVETTLIT_					0	0	0			REV__ENST00000373379.5_1_X:74520846-74523343:+|nuORF	REV__ENST00000373379.5_1_X:74520846-74523343:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2794677615166	2	505.779482	1009.54441	0.82453	0.00041703	-1.3931	-0.00070462	-0.56861	-0.00028759	505.77837870379125	31.665	0.43208	33.49	33.27	33.702	1.8246					26	16	2	0	0	0	0.1735	1	13258	13258		36.044	0	1	2563100	+		24883	8923	12368	12423	28646	28646					0.04002036723386482
PHVISRHR	8	Unmodified	_PHVISRHR_					0	0	0			REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2915222048759	2	501.291217	1000.56788	2.0378	0.0010215	-1.4228	-0.00071322	0.61505	0.00030832	501.2901365748803	82.17	0.66705	82.17	81.701	82.368	0					33	21	3	0	0	0	0.88958	1	34224	34224		2.8892	0	1	2451300	+		24884	14677	12369	12424	28647	28647					0.06761940071226036
PHVISRHR	8	Unmodified	_PHVISRHR_					0	0	0			REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2915222048759	2	501.291217	1000.56788	2.1373	0.0010714	-1.0928	-0.00054779	1.0446	0.00052363	501.29054744074784	82.932	0.43146	82.932	82.706	83.138	0					33	13	3	0	0	0	0.88958	1	34547	34547		2.8892	0	1	8973900	+		24885	14677	12369	12424	28648	28648					0.06761940071226036
PHVISRHR	8	Unmodified	_PHVISRHR_					0	0	0			REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2911559939384	2	501.291217	1000.56788	2.6915	0.0013492	-2.5446	-0.0012756	0.14688	7.3632E-05	501.2898334514565	81.958	0.5526	82.238	81.906	82.459	0.2802					26	17	2	0	0	0	0.89176	1	34272	34272		0.79363	0	1	1752000	+		24886	14677	12369	12424	28649	28649					0.06761940071226036
PHVISRHR	8	Unmodified	_PHVISRHR_					0	0	0			REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2917968630791	2	501.291217	1000.56788	2.8082	0.0014077	-1.3372	-0.00067033	1.4709	0.00073737	501.2903539027361	82.751	0.42683	83.021	82.817	83.244	0.27029					34	13	3	0	0	0	0.88958	1	34609	34609		2.8892	0	1	9663800	+		24887	14677	12369	12424	28650	28650					0.06761940071226036
PHVISRHR	8	Unmodified	_PHVISRHR_					0	0	0			REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	REV__TECTA|p.R767Qfs*92|1|0.27|ENSG00000109927|chr11:121128276-121128277|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	501.291217	1000.56788	3.1191	0.0015636	-1.9222	-0.0009636	1.1968	0.00059996	501.29061350602996	81.069	0.4623	82.303	82.07	82.533	1.2332	0.065698	8.3739E-05	NaN	2.8892	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1066400	+		24888	14677	12369	12424							0.06761940071226036
PHVLVPHA	8	Unmodified	_PHVLVPHA_					0	0	0		ENST00000514829.5_1_4:187065816-187079198:+|nuORF;nc|ENSG00000109794|A5PLN7-2|FAM149A;ENST00000515078.5_1_4:187070333-187088439:+|nuORF;nc|ENSG00000109794|A5PLN7-4|FAM149A;ENSG00000109794|ENST00000706927|FAM149A;nc|ENSG00000109794|A5PLN7|FAM149A	ENST00000514829.5_1_4:187065816-187079198:+|nuORF	ENST00000514829.5_1_4:187065816-187079198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2520324587822	2	435.253237	868.491922	1.2706	0.00055302	-3.1136	-0.0013552	-1.8431	-0.0008022	435.2519242514978	74.035	0.8489	74.035	73.55	74.399	0					56	26	3	0	0	0	0.88958	1	30844	30844		2.8892	0	1	5096100			24889	1679	12370	12425	28651	28651					0.05241543171075591
PHVLVSQNIL	10	Unmodified	_PHVLVSQNIL_					0	0	0			REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|6|1|sense	REV__Harlequin-int_dup238|chr6:111284651-111288187:-|5.62970209908365|0.2813414849289727|4.32|429.0|6|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3294555544853	2	560.329673	1118.64479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.854	1	76.636	76.136	77.136	1.7817								0	0	0	0.65703	1	31398	31398		7.9102	0	1		+		24890	14174	12371	12426	28652	28652					0.09021693777026485
PHVPGLTH	8	Unmodified	_PHVPGLTH_					0	0	0			REV__ENSG00000119408|ENST00000320246|NEK6	REV__ENSG00000119408|ENST00000320246|NEK6	MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2332946658134	2	429.235045	856.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.02	1	34.02	33.52	34.52	0								0	0	0	1.0178	1	14256	14256		2.8892	0	1		+		24891	9540	12372	12427	28653	28653					0.021566662743680354
PHVVAGLH	8	Unmodified	_PHVVAGLH_					0	0	0		nc|ENSG00000075826|Q9NQW1-5|SEC31B;ENSG00000075826|ENST00000370345|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	nc|ENSG00000075826|Q9NQW1-5|SEC31B	MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2359802126884	2	415.237587	828.460622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.12	1	101.32	100.82	101.82	0.1969								0	0	0	1.0178	1	42518	42518		0.79363	0	1				24892	941	12373	12428	28654	28654					0.03952970136992917
PHVYLQWQL	9	Unmodified	_PHVYLQWQL_					0	0	0		HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3203613162041	2	592.316566	1182.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.264	1	49.264	48.764	49.764	0								0	0	0	0.42693	1	20567	20567		2.3027	0	1				24893	7628	12374	12429	28655	28655					0.034574246055626645
PHVYLQWQL	9	Unmodified	_PHVYLQWQL_					0	0	0		HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|64|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3176147341728	2	592.316566	1182.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.317	1	47.277	46.777	47.777	1.9596								0	0	0	0.42693	1	18989	18989		2.3027	0	1				24894	7628	12374	12429	28656	28656					0.034574246055626645
PHWFRPAP	8	Unmodified	_PHWFRPAP_					0	0	0			REV__ENST00000542575.6_2_19:47291354-47291816:-|nuORF	REV__ENST00000542575.6_2_19:47291354-47291816:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2661926150322	2	504.264136	1006.51372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.464	1	38.464	37.964	38.964	0								0	0	0	1.0178	1	16123	16123		2.8892	0	1		+		24895	13788	12375	12430	28657	28657					0.010723479196485641
PHWMPPSTPF	10	Unmodified	_PHWMPPSTPF_					0	0	0		ENST00000415816.6_2_17:41158824-41164235:+|nuORF	ENST00000415816.6_2_17:41158824-41164235:+|nuORF	ENST00000415816.6_2_17:41158824-41164235:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.7389099001884	3	399.523427	1195.54845	1.3985	0.00055872	3.0929	0.0012357	4.4914	0.0017944	399.5244647759968	66.705	0.34114	68.094	67.874	68.215	1.3888					21	10	3	0	0	0	0.12555	1	27940	27940		2.086	0.89267	1	682210			24896	6405	12376	12431	28658	28658					-0.0415019705458235
PHWMPPSTPF	10	Unmodified	_PHWMPPSTPF_					0	0	0		ENST00000415816.6_2_17:41158824-41164235:+|nuORF	ENST00000415816.6_2_17:41158824-41164235:+|nuORF	ENST00000415816.6_2_17:41158824-41164235:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.7391235232353	3	399.523427	1195.54845	1.5818	0.00063195	1.1857	0.00047373	2.7675	0.0011057	399.5238250450072	66.205	0.25094	68.094	67.931	68.182	1.8889					12	7	2	0	0	0	0.12555	1	27784	27784		2.086	0.17963	1	601040			24897	6405	12376	12431	28659	28659					-0.0415019705458235
PHYCYSHH	8	Unmodified	_PHYCYSHH_					0	0	0			REV__ENSG00000197674|ENST00000641159|OR51C1P	REV__ENSG00000197674|ENST00000641159|OR51C1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1044.240039050579	1	1043.41521	1042.40793	1.3969	0.0014576	-0.16536	-0.00017254	1.2316	0.001285	1043.4155990697527	17.159	0.47395	18.462	18.142	18.616	1.3023					19	15	2	0	0	0	0.89176	1	7088	7088		0.79363	0	1	510790	+		24898	11687	12377	12432	28660	28660					-0.11157355988120798
PHYCYSHH	8	Unmodified	_PHYCYSHH_					0	0	0			REV__ENSG00000197674|ENST00000641159|OR51C1P	REV__ENSG00000197674|ENST00000641159|OR51C1P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1044.240039050579	1	1043.41521	1042.40793	1.3969	0.0014576	-0.16536	-0.00017254	1.2316	0.001285	1043.4155990697527	17.159	0.47395	18.462	18.142	18.616	1.3023					19	15	2	0	0	0	2.3239	1	7088	7088		0.79363	0	1	510790	+		24899	11687	12377	12432	28661	28661					-0.11157355988120798
PHYLLSSK	8	Unmodified	_PHYLLSSK_					0	0	0		MID1-SPAG17|2|fusion;MID1-SPAG17|1|fusion;MID1-SPAG17|3|fusion;ENSG00000155761|ENST00000336338|SPAG17	MID1-SPAG17|2|fusion	MID1-SPAG17|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7650939822197	2	472.763635	943.512717	2.2847	0.0010801	3.6629	0.0017317	5.9476	0.0028118	472.7653984061485	79.187	0.33537	79.187	79.056	79.391	0					31	10	4	0	0	0	0.88958	1	32989	32989		2.8892	0	1	11290000			24900	3429	12378	12433	28662	28662					0.03870088760095314
PHYVPTHKHR	10	Unmodified	_PHYVPTHKHR_					0	0	0			REV__nc|ENSG00000171649|Q3SY52-3|ZIK1	REV__nc|ENSG00000171649|Q3SY52-3|ZIK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	636.3449584841728	2	636.341438	1270.66832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.834	1	53.834	53.334	54.334	0								0	0	0	0.66031	1	22444	22444		3.9444	0	1		+		24901	11038	12379	12434	28663	28663					0.04381552334234584
PHYYRRKNI	9	Unmodified	_PHYYRRKNI_					0	0	0		ENST00000372004.7_1_20:46256675-46256735:+|nuORF	ENST00000372004.7_1_20:46256675-46256735:+|nuORF	ENST00000372004.7_1_20:46256675-46256735:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2291137576103	3	416.231634	1245.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.876	1	28.623	28.123	29.123	1.747								0	0	0	0.42693	1	11246	11246		1.1933	0.41681	1				24902	6134	12380	12435	28664	28664					0.06006436476991439
PIAAKELT	8	Unmodified	_PIAAKELT_					0	0	0			REV__tr|A0A553SM83|A0A553SM83_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_22080PE=4SV=1	REV__tr|A0A553SM83|A0A553SM83_NIACIPyruvatedehydrogenaseE1componentsubunitbetaOS=NialliacirculansOX=1397GN=CEQ21_22080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7521850466728	2	421.752736	841.490919	1.7023	0.00071795	-2.6807	-0.0011306	-0.97843	-0.00041265	421.75146598925136	70.838	0.7754	71.161	70.592	71.367	0.32359					51	24	3	0	0	0	0.89051	1	29693	29693		2.3027	0.24298	1	5187000	+		24903	15009	12381	12436	28665	28665					0.06383284011508294
PIADTVLVL	9	Unmodified	_PIADTVLVL_					0	0	0			REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	940.5738403201103	1	940.57136	939.564084	2.2251	0.0020929	-1.8039	-0.0016967	0.42121	0.00039618	940.5691825563515	64.586	0.32011	66.514	66.389	66.709	1.928					14	9	2	0	0	0	0.1735	1	27126	27126		36.044	0	1	787130	+		24904	10632	12382	12437	28666	28666					0.0918841273412454
PIADTVLVL	9	Unmodified	_PIADTVLVL_					0	0	0			REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	940.57136	939.564084	2.9884	0.0028108	0.35338	0.00033238	3.3418	0.0031432	940.5715180356921	65.061	0.28537	66.46	66.316	66.601	1.3989	-0.026909	0.00038381	NaN	36.044	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1390400	+		24905	10632	12382	12437							0.0918841273412454
PIADTVLVL	9	Unmodified	_PIADTVLVL_					0	0	0			REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	REV__ENST00000561487.1_1_16:2577913-2578724:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	940.57136	939.564084	2.2251	0.0020929	-1.8039	-0.0016967	0.42121	0.00039618	940.5691825563515	64.586	0.32011	66.514	66.389	66.709	1.928	0.026909	-0.0016452	NaN	36.044	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	787130	+		24906	10632	12382	12437							0.0918841273412454
PIAGIPKK	8	Unmodified	_PIAGIPKK_					0	0	0			REV__ENST00000599588.5_1_19:17337742-17339107:+|nuORF	REV__ENST00000599588.5_1_19:17337742-17339107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	823.5411865115166	1	823.54	822.532724	2.8368	0.0023362	-1.3581	-0.0011185	1.4786	0.0012177	823.5387948894772	107.81	0.28098	107.96	107.83	108.11	0.15781					64	17	6	0	0	0	0.89178	2	46485	46485;46547		0.69038	0	1	10939000000	+		24907	8947	12383	12438	28667;28668	28667					0.1143588449069739
PIASITKEK	9	Unmodified	_PIASITKEK_					0	0	0		ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.L1514Ffs*17|1|0.21|ENSG00000133812|chr11:9795861-9795862|-/TTGGGGATGTTGCCTGGACCTTGGAA|frameshift_variant;ENSG00000133812|ENST00000256190|SBF2	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.5930663943291	1	986.588073	985.580796	5.2901	0.0052191	-0.74623	-0.00073622	4.5438	0.0044829	986.5855770478908	92.386	0.39262	93.322	93.114	93.506	0.93624					25	11	3	0	0	0	0.44535	1	38863	38863		18.135	5.0925	1	2826200			24908	2583	12384	12439	28669	28669					0.08742913620096715
PIAWNGHN	8	Unmodified	_PIAWNGHN_					0	0	0			REV__ENST00000482896.5_1_3:33701004-33701076:-|nuORF	REV__ENST00000482896.5_1_3:33701004-33701076:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	455.2507507205009	2	454.722301	907.43005	3.7098	0.0016869	-0.16244	-7.3864E-05	3.5473	0.001613	454.7242132581406	73.223	0.40998	74.553	74.35	74.76	1.3297					13	12	2	0	0	0	2.3239	1	30805	30805		2.8892	2.0956	1	483530	+		24909	13375	12385	12440	28670	28670					-0.027368082480506928
PIDSYCCM	8	Unmodified	_PIDSYCCM_					0	0	0			REV__ENST00000407627.6_1_19:8027511-8027907:-|nuORF	REV__ENST00000407627.6_1_19:8027511-8027907:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	466.1720458865166	2	466.171549	930.328546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.063	1	50.063	49.563	50.563	0								0	0	0	1.0178	1	20889	20889		0.79363	0	1		+		24910	12907	12386	12441	28671	28671					-0.1394050704878964
PIDTLGAYSS	10	Unmodified	_PIDTLGAYSS_					0	0	0		nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;ENSG00000163092|ENST00000409195|XIRP2;XIRP2|p.K632*|1|0.42|ENSG00000163092|chr2:167243810-167243826|TAAGGCAAAGTGGTTAT/-|frameshift_variant	nc|ENSG00000163092|A4UGR9-2|XIRP2	nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.3147460818291	2	512.253297	1022.49204	1.6799	0.00086055	-0.097821	-5.0109E-05	1.5821	0.00081044	512.2534411811364	34.065	1.2346	34.065	33.76	34.995	0					117	39	4	0	0	0	0.85124	1	14659	14659		6.7232	0.96273	1	7179800			24911	3663	12387	12442	28672	28672					-0.018305464102354563
PIEELDCG	8	Unmodified	_PIEELDCG_					0	0	0			REV__nc|ENSG00000121380|Q9BZR8-2|BCL2L14	REV__nc|ENSG00000121380|Q9BZR8-2|BCL2L14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.1934387087822	2	438.194393	874.374234	0.38481	0.00016862	-2.8696	-0.0012574	-2.4848	-0.0010888	438.1936744897347	20.086	0.49698	20.086	19.885	20.382	0					33	15	3	0	0	0	0.88504	1	8316	8316		5.7604	0	1	1581700	+		24912	9587	12388	12443	28673	28673					-0.06797822270550569
PIEELDCG	8	Unmodified	_PIEELDCG_					0	0	0			REV__nc|ENSG00000121380|Q9BZR8-2|BCL2L14	REV__nc|ENSG00000121380|Q9BZR8-2|BCL2L14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	438.194393	874.374234	0.38481	0.00016862	-2.8696	-0.0012574	-2.4848	-0.0010888	438.1936744897347	20.086	0.49698	20.086	19.885	20.382	0	0	0	NaN	5.7604	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1581700	+		24913	9587	12388	12443							-0.06797822270550569
PIEKVPIIQK	10	Unmodified	_PIEKVPIIQK_					0	0	0		tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1285583376884	3	388.916541	1163.72779	0.69535	0.00027043	-0.53896	-0.00020961	0.15638	6.082E-05	389.25106431016945	88.006	0.71642	88.006	87.463	88.18	0					34	23	2	0	0	0	0.1256	1	36632	36632		0.62683	0.12087	1	836200			24914	17203	12389	12444	28674	28674					0.15248010505047205
PIEKVPIIQK	10	Unmodified	_PIEKVPIIQK_					0	0	0		tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	tr|A0A7D6ZZ06|A0A7D6ZZ06_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	388.916541	1163.72779	2.586	0.0010058	-1.8638	-0.00072486	0.72225	0.0002809	389.2509378709899	87.528	0.33698	87.763	87.549	87.886	0.23471	-0.12169	-0.0011362	NaN	0.62683	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290140			24915	17203	12389	12444							0.15248010505047205
PIFALSFKL	9	Unmodified	_PIFALSFKL_					0	0	0		tr|A0A553SLR8|A0A553SLR8_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_21165PE=3SV=1	tr|A0A553SLR8|A0A553SLR8_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_21165PE=3SV=1	tr|A0A553SLR8|A0A553SLR8_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_21165PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1395751833916	2	518.315503	1034.61645	2.1788	0.0011293	2.5244	0.0013084	4.7032	0.0024377	518.3180519304816	80.948	0.27917	80.948	80.791	81.07	0					18	8	3	0	0	0	0.10591	1	33696	33696		12.532	4.6214	1	913660			24916	16350	12390	12445	28675	28675					0.10052995867749814
PIFGLMQE	8	Unmodified	_PIFGLMQE_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7395507693291	2	467.738771	933.462989	2.2259	0.0010412	-0.046803	-2.1892E-05	2.1791	0.0010193	467.73850724287405	50.288	3.6213	51.679	49.212	52.834	1.3911					248	116	3	0	0	0	0.88409	1	20332	20332		6.3541	0	1	3576900			24917	2463	12391	12446	28676	28676					-0.006403622402103792
PIFGPSTGVL	10	Unmodified	_PIFGPSTGVL_					0	0	0			REV__tr|A0A553SJV4|A0A553SJV4_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	REV__tr|A0A553SJV4|A0A553SJV4_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2790099978447	2	494.279118	986.543683	2.0696	0.001023	-1.8977	-0.00093797	0.17197	8.5004E-05	494.2785413742091	43.304	0.23482	45.248	45.134	45.368	1.9438					10	7	2	0	0	0	0.77604	1	18176	18176		14.838	0.93222	1	341030	+		24918	14920	12392	12447	28677	28677					0.049872420743326984
PIFHKIKILG	10	Unmodified	_PIFHKIKILG_					0	0	0		ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3777343630791	2	583.376426	1164.7383	1.2955	0.00075575	2.0763	0.0012112	3.3717	0.001967	583.3775609334858	29.468	0.30603	29.468	29.302	29.608	0					25	9	3	0	0	0	0.88031	1	12318	12318		6.7232	0	1	4240900			24919	3769	12393	12448	28678	28678					0.16252037950107479
PIFHKIKILG	10	Unmodified	_PIFHKIKILG_					0	0	0		ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3774902224541	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.59	1	28.869	28.369	29.369	1.2789								0	0	0	0.66151	1	11562	11562		1.6526	0	1				24920	3769	12393	12448	28679	28679					0.16252037950107479
PIFHKIKILG	10	Unmodified	_PIFHKIKILG_					0	0	0		ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	ENSG00000164294|ENST00000503787|GPX8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	583.376426	1164.7383	0.97617	0.00056947	2.2861	0.0013337	3.2623	0.0019031	583.3776989755997	29.295	0.48449	29.574	29.38	29.865	0.2793	0.052867	0.00013527	NaN	6.7232	29	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3020900			24921	3769	12393	12448							0.16252037950107479
PIFLGVHQ	8	Unmodified	_PIFLGVHQ_					0	0	0		tr|A0A7D6VTI7|A0A7D6VTI7_9CLOTMetallophosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_17230PE=3SV=1	tr|A0A7D6VTI7|A0A7D6VTI7_9CLOTMetallophosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_17230PE=3SV=1	tr|A0A7D6VTI7|A0A7D6VTI7_9CLOTMetallophosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_17230PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1761047244072	3	304.176356	909.507237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.203	1	61.203	60.703	61.703	0								0	0	0	1.0178	1	25520	25520		0.45834	0	1				24922	16921	12394	12449	28680	28680					0.04886409968287353
PIGFALVL	8	Unmodified	_PIGFALVL_					0	0	0			REV__ENSG00000137077|ENST00000259607|CCL21	REV__ENSG00000137077|ENST00000259607|CCL21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2625610232353	2	415.262739	828.510926	2.8458	0.0011817	-1.2718	-0.00052812	1.574	0.00065362	415.2622024110497	89.054	0.58002	89.278	88.971	89.551	0.22359					43	17	3	0	0	0	0.89176	1	37289	37289		0.79363	0	1	3749100	+		24923	10011	12395	12450	28681	28681					0.08981079742113707
PIGHAKGQ	8	Unmodified	_PIGHAKGQ_					0	0	0			REV__ENST00000462392.5_1_2:131104212-131104311:+|nuORF	REV__ENST00000462392.5_1_2:131104212-131104311:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	404.2299987673759	2	404.22722	806.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.86	1	103.92	103.42	104.42	0.059502								0	0	0	1.0178	1	43678	43678		0.79363	0	1		+		24924	13208	12396	12451	28682	28682					0.028923797573384036
PIHDDSGN	8	Unmodified	_PIHDDSGN_					0	0	0		tr|A0A553ST75|A0A553ST75_NIACIChemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_04505PE=4SV=1	tr|A0A553ST75|A0A553ST75_NIACIChemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_04505PE=4SV=1	tr|A0A553ST75|A0A553ST75_NIACIChemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_04505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.3632079958916	1	854.363886	853.35661	1.2037	0.0010284	-3.471	-0.0029655	-2.2674	-0.0019372	854.3605213291916	100.4	0.21513	100.4	100.26	100.47	0					19	6	4	0	0	0	0.88958	1	42056	42056		2.8892	0.31174	1	51460000			24925	16641	12397	12452	28683	28683					-0.07593401481187811
PIHFVFGN	8	Unmodified	_PIHFVFGN_					0	0	0		ENST00000399503.3_1_5:56190013-56190223:+|nuORF	ENST00000399503.3_1_5:56190013-56190223:+|nuORF	ENST00000399503.3_1_5:56190013-56190223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.4840576052666	1	930.483214	929.475937	3.1999	0.0029774	-2.0509	-0.0019083	1.149	0.0010691	930.4818846989785	85.064	0.70243	86.66	86.431	87.133	1.5962					63	28	3	0	0	0	0.88409	1	35613	35613		6.3541	0.59368	1	23483000			24926	6338	12398	12453	28684	28684					0.008378369341926373
PIHSVESNAL	10	Unmodified	_PIHSVESNAL_					0	0	0			REV__ENST00000539304.1_1_12:7344181-7354515:+|nuORF	REV__ENST00000539304.1_1_12:7344181-7354515:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1951782107353	2	533.780013	1065.54547	5.8896	0.0031437	0.013833	7.384E-06	5.9034	0.0031511	533.7802312848213	88.521	0.41889	89.578	89.369	89.788	1.0562					21	12	2	0	0	0	0.12525	1	37249	37249		3.5965	0	1	1219000	+		24927	13772	12399	12454	28685	28685					0.015322510922715082
PIIAALALG	9	Unmodified	_PIIAALALG_					0	0	0			REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	838.5409423708916	1	838.539666	837.53239	1.5318	0.0012845	-0.0085538	-7.1727E-06	1.5233	0.0012773	838.5394115531028	65.943	0.18424	67.851	67.706	67.891	1.9085					9	5	2	0	0	0	0.11074	1	27672	27672		45.75	0	1	586080	+		24928	15840	12400	12455	28686	28686					0.1071246477083605
PIIAALALG	9	Unmodified	_PIIAALALG_					0	0	0			REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	838.539666	837.53239	1.7208	0.001443	-0.46836	-0.00039274	1.2524	0.0010502	838.5388509839869	66.36	0.30737	67.749	67.566	67.874	1.3888	-0.051169	-0.00019022	NaN	45.75	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	718150	+		24929	15840	12400	12455							0.1071246477083605
PIIAALALG	9	Unmodified	_PIIAALALG_					0	0	0			REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	REV__tr|A0A7D7A1Z8|A0A7D7A1Z8_9CLOTStageIIsporulationproteinMOS=ClostridiumintestinaleOX=36845GN=spoIIMPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	838.539666	837.53239	1.5318	0.0012845	-0.0085538	-7.1727E-06	1.5233	0.0012773	838.5394115531028	65.943	0.18424	67.851	67.706	67.891	1.9085	0.051169	0.00019535	NaN	45.75	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	586080	+		24930	15840	12400	12455							0.1071246477083605
PIKKKIRLRKI	11	Unmodified	_PIKKKIRLRKI_					0	0	0			REV__tr|A0A7D7A2Z8|A0A7D7A2Z8_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19760PE=4SV=1	REV__tr|A0A7D7A2Z8|A0A7D7A2Z8_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19760PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	696.9951660037041	2	696.998106	1391.98166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.354	1	97.639	97.139	98.139	0.28442								0	0	0	0.63775	1	40964	40964		0	0	1		+		24931	15855	12401	12456	28687	28687					0.30134702394980195
PIKKNIFH	8	Unmodified	_PIKKNIFH_					0	0	0		ENSG00000148488|ENST00000377602|ST8SIA6;ST8SIA6|p.A252Sfs*40|1|0.5|ENSG00000148488|chr10:17321321-17321322|-/T|frameshift_variant	ENSG00000148488|ENST00000377602|ST8SIA6	ENSG00000148488|ENST00000377602|ST8SIA6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8054382205009	2	498.803094	995.591636	2.2627	0.0011287	1.5511	0.00077371	3.8139	0.0019024	498.80374542426154	39.929	0.61578	40.242	39.892	40.508	0.31263					57	19	4	0	0	0	0.88587	1	16832	16832		5.2307	0.47466	1	13361000			24932	3214	12402	12457	28688	28688					0.09366360785020333
PIKRLAAG	8	Unmodified	_PIKRLAAG_					0	0	0		ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	ENSG00000198786|ENST00000361567|MT-ND5	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2686950564384	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7273	1	2.3806	1.8806	2.8806	0.65331								0	0	0	1.0178	1	708	708		2.8892	0	1				24933	5082	12403	12458	28689	28689					0.10394116205179671
PIKSLVYY	8	Unmodified	_PIKSLVYY_					0	0	0			REV__nc|ENSG00000130226|P42658-2|DPP6	REV__nc|ENSG00000130226|P42658-2|DPP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.5662719607353	1	982.560795	981.553519	2.821	0.0027718	-0.59291	-0.00058257	2.2281	0.0021892	982.5600259391421	75.116	4.7568	76.898	76.26	81.017	1.7817					394	152	4	0	0	0	0.79422	1	32859	32859		21.747	0.87544	1	44767000	+		24934	9769	12404	12459	28690	28690					0.06200430079695707
PIKSTSATE	9	Unmodified	_PIKSTSATE_					0	0	0			REV__ENSG00000152217|ENST00000649279|SETBP1	REV__ENSG00000152217|ENST00000649279|SETBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.2497436404228	2	467.248015	932.481476	3.0434	0.001422	0.092079	4.3024E-05	3.1355	0.001465	467.2480844529367	86.813	0.52169	86.813	86.551	87.072	0					39	20	2	0	0	0	0.8432	1	36111	36111		1.4819	0	1	100180000	+		24935	10416	12405	12460	28691	28691					0.012534709353417384
PILFPMMS	8	Unmodified	_PILFPMMS_					0	0	0			REV__SPAG16|p.P488Sfs*57|1|0.03|ENSG00000144451|chr2:214014010-214014011|-/CAGTGAAGAACATGAAGTGCATAAAGGAA|frameshift_variant	REV__SPAG16|p.P488Sfs*57|1|0.03|ENSG00000144451|chr2:214014010-214014011|-/CAGTGAAGAACATGAAGTGCATAAAGGAA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	468.2409850955009	2	468.240092	934.465632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.111	1	83.381	82.881	83.881	0.27029								0	0	0	1.0178	1	34758	34758		0.79363	0	1		+		24936	14665	12406	12461	28692	28692					-0.004222301069034984
PILINSAFL	9	Unmodified	_PILINSAFL_					0	0	0		nc|ENSG00000143493|Q9NVH2-4|INTS7;nc|ENSG00000143493|Q9NVH2-3|INTS7;nc|ENSG00000143493|Q9NVH2-2|INTS7;ENSG00000143493|ENST00000366994|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	nc|ENSG00000143493|Q9NVH2-4|INTS7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.7720519900322	2	494.29731	986.580068	2.7618	0.0013652	0.62518	0.00030903	3.387	0.0016742	494.2964205936226	72.268	0.1865	74.078	73.981	74.167	1.8101					8	5	2	0	0	0	0.11333	1	30351	30351		13.508	9.1786	1	364840			24937	3037	12407	12462	28693	28693					0.08624118971033568
PILLRILIVK	10	Unmodified	_PILLRILIVK_					0	0	0		chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|23	chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|23	chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|23	MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2855102419853	3	393.284677	1176.8322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.19	1	105.35	104.85	105.85	0.15859								0	0	0	0.66264	1	44747	44747		0	0	1				24938	204	12408	12463	28694	28694					0.2508575705239764
PILLVGILPM	10	Unmodified	_PILLVGILPM_					0	0	0		tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.3404418826103	2	533.340664	1064.66677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.7	1	106.75	106.25	107.25	0.05455								0	0	0	0.66237	1	45511	45511		0.45834	0	1				24939	16584	12409	12464	28695	28695					0.1370278220124419
PILRENKPI	9	Unmodified	_PILRENKPI_					0	0	0			REV__tr|A0A553STR2|A0A553STR2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05445PE=4SV=1	REV__tr|A0A553STR2|A0A553STR2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3317138552666	2	540.332216	1078.64988	2.1501	0.0011618	-2.4789	-0.0013394	-0.32879	-0.00017765	540.3308373957354	69.207	1.3996	70.572	69.447	70.847	1.3657					105	45	3	0	0	0	0.75267	1	28967	28967		5.2307	0	1	3296600	+		24940	15256	12410	12465	28696	28696					0.11369997639667417
PILRENKPI	9	Unmodified	_PILRENKPI_					0	0	0			REV__tr|A0A553STR2|A0A553STR2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05445PE=4SV=1	REV__tr|A0A553STR2|A0A553STR2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3314697146416	2	540.332216	1078.64988	1.9151	0.0010348	-2.1296	-0.0011507	-0.21457	-0.00011594	540.3310747216185	68.672	2.14	70.525	69.626	71.766	1.853					98	68	2	0	0	0	0.75267	1	28706	28706		5.2307	0	1	2951700	+		24941	15256	12410	12465	28697	28697					0.11369997639667417
PILYKAKMP	9	Unmodified	_PILYKAKMP_					0	0	0			REV__ENST00000305366.7_1_3:149095461-149095638:-|nuORF	REV__ENST00000305366.7_1_3:149095461-149095638:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8182250857353	2	530.814813	1059.61507	2.0445	0.0010852	-0.77877	-0.00041338	1.2657	0.00067185	530.8142953149015	69.16	2.2442	70.526	69.352	71.596	1.3657					144	72	4	0	0	0	0.76456	1	28710	28710		4.756	1.8668	1	15337000	+		24942	12333	12411	12466	28698	28698					0.0876503850734025
PIMALLFCI	9	Unmodified	_PIMALLFCI_					0	0	0			REV__tr|A0A553SRK1|A0A553SRK1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_01250PE=3SV=1	REV__tr|A0A553SRK1|A0A553SRK1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_01250PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7854797244072	2	510.784667	1019.55478	1.2031	0.0006145	1.0929	0.00055826	2.296	0.0011728	510.78505966821547	29.589	0.36945	30.871	30.734	31.104	1.2825					29	11	3	0	0	0	0.24585	1	12476	12476		28.173	5.4369	1	5846900	+		24943	15164	12412	12467	28699	28699					0.04578604852611079
PIMLLSVH	8	Unmodified	_PIMLLSVH_					0	0	0			REV__ENST00000487376.5_1_6:30695627-30695732:-|nuORF	REV__ENST00000487376.5_1_6:30695627-30695732:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	455.2651244997978	2	455.264956	908.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.94	1	91.921	91.421	92.421	0.98157								0	0	0	1.0178	1	38307	38307		2.8892	0	1		+		24944	13398	12413	12468	28700	28700					0.057442208933935035
PIPDMGGC	8	Unmodified	_PIPDMGGC_					0	0	0			REV__ENST00000519879.1_1_8:118533115-118541135:+|nuORF	REV__ENST00000519879.1_1_8:118533115-118541135:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	395.1676818728447	2	395.167124	788.319696	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.265	1	55.235	54.735	55.735	1.9697								0	0	0	1.0178	1	22316	22316		2.8892	0	1		+		24945	10749	12414	12469	28701	28701					-0.08293112622948229
PIQRAKPWKW	10	Unmodified	_PIQRAKPWKW_					0	0	0			REV__chr5:150402000-150405085|95|1388.15|0.0|27.05|-|0|None,CD74|1	REV__chr5:150402000-150405085|95|1388.15|0.0|27.05|-|0|None,CD74|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	437.7566100955009	3	437.25578	1308.74551	3.4721	0.0015182	3.0474	0.0013325	6.5195	0.0028507	437.25671926980334	82.569	1.4094	83.781	83.099	84.508	1.2125					96	44	3	0	0	0	0.12535	1	34713	34713		3.5871	0.5148	1	2113200	+		24946	8328	12415	12470	28702	28702					0.10348770550535846
PIRETILSP	9	Unmodified	_PIRETILSP_					0	0	0			REV__ENST00000503065.1_1_5:39269825-39270805:-|nuORF	REV__ENST00000503065.1_1_5:39269825-39270805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3043701052666	2	513.303124	1024.5917	1.8806	0.00096532	0.88828	0.00045596	2.7689	0.0014213	513.3034790774198	49.845	0.97309	50.175	49.696	50.669	0.33019					65	30	3	0	0	0	0.063746	1	20891	20891		62.573	2.4988	1	5760900	+		24947	13514	12416	12471	28703	28703					0.0803831599437217
PIRLLLRLQ	9	Unmodified	_PIRLLLRLQ_					0	0	0			REV__nc|ENSG00000101955|P78539-3|SRPX	REV__nc|ENSG00000101955|P78539-3|SRPX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3801147341728	2	561.3795	1120.74445	2.6711	0.0014995	-0.69168	-0.00038829	1.9794	0.0011112	561.3789292823939	107.52	0.3409	107.57	107.48	107.82	0.052452					47	17	5	0	0	0	0.85019	1	46049	46049		0.52476	0	1	373030000	+		24948	9050	12417	12472	28704	28704					0.1889055618164548
PIRRRRRMW	9	Unmodified	_PIRRRRRMW_					0	0	0			REV__ENST00000315596.14_2_13:33160594-33223003:+|nuORF	REV__ENST00000315596.14_2_13:33160594-33223003:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	442.3177978396416	3	442.931525	1325.77275	3.1772	0.0014073	2.5319	0.0011215	5.7091	0.0025287	442.93302165149396	82.354	0.90352	84.024	83.671	84.574	1.67					45	28	2	0	0	0	0.11938	1	34621	34621		1.1933	0	1	1444100	+		24949	12385	12418	12473	28705	28705					0.12288975609953923
PIRRYELYRQR	11	Unmodified	_PIRRYELYRQR_					0	0	0			REV__ENSG00000185115|ENST00000332303|NSMCE3	REV__ENSG00000185115|ENST00000332303|NSMCE3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6292602419853	3	517.295186	1548.86373	1.4608	0.00075565	-1.2624	-0.00065301	0.19841	0.00010264	517.2951020767046	112.86	0.26431	112.86	112.68	112.94	0					15	7	4	0	0	0	1.0224	1	48772	48772		2.4348	0.35082	1	17749000	+		24950	11450	12419	12474	28706	28706					0.11125098068396255
PISFIGVGLV	10	Unmodified	_PISFIGVGLV_					0	0	0		ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	500.7383911013603	2	501.305136	1000.59572	2.3945	0.0012004	-1.228	-0.00061558	1.1666	0.0005848	501.30384452362597	62.698	0.15605	64.643	64.532	64.688	1.9444					7	4	2	0	0	0	0.12484	1	26321	26321		11.64	6.4096	1	303060			24951	4853	12420	12475	28707	28707					0.09544405488088614
PISFLQPAR	9	Unmodified	_PISFLQPAR_					0	0	0		ENST00000341697.7_1_1:151118323-151118431:-|nuORF	ENST00000341697.7_1_1:151118323-151118431:-|nuORF	ENST00000341697.7_1_1:151118323-151118431:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5352355837822	3	343.534431	1027.58147	0.44265	0.00015206	1.3611	0.00046757	1.8037	0.00061963	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.82654	1	10586	10586		2.2828	0	1	4123700			24952	5935	12421	12476	28708	28708					0.06877753059779934
PISITPPPSL	10	Unmodified	_PISITPPPSL_					0	0	0		ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	ENSG00000185958|ENST00000327337|FAM186A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3039428591728	2	511.30005	1020.58555	2.5775	0.0013179	2.3973	0.0012258	4.9748	0.0025436	511.30121048789744	68.032	0.3684	69.902	69.611	69.979	1.87					20	11	2	0	0	0	0.5476	1	28465	28465		25.399	2.2509	1	3533500			24953	4774	12422	12477	28709	28709					0.07607797762852897
PISPVQPLL	9	Unmodified	_PISPVQPLL_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2984802126884	2	482.29731	962.580068	2.8232	0.0013616	-0.65544	-0.00031612	2.1677	0.0010455	482.2969023412263	75.345	0.74324	76.651	76.15	76.894	1.3063					58	23	3	0	0	0	0.073578	2	31632	31531;31632		58.679	6.2513	1	2867800	+		24954	8649	12423	12478	28710;28711	28711					0.09728118971031563
PISPVQPLL	9	Unmodified	_PISPVQPLL_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2980834841728	2	482.29731	962.580068	2.6613	0.0012835	-1.2515	-0.00060361	1.4097	0.00067991	482.2968269276448	74.838	0.71861	76.619	76.195	76.913	1.7817					50	22	3	0	0	0	0.037761	4	31369	31322;31369;31412;31466		78.149	10.069	1	3228800	+		24955	8649	12423	12478	28712;28713;28714;28715	28713					0.09728118971031563
PISPVQPLL	9	Unmodified	_PISPVQPLL_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	482.29731	962.580068	2.6613	0.0012835	-1.2515	-0.00060361	1.4097	0.00067991	482.2968269276448	74.838	0.71861	76.619	76.195	76.913	1.7817	-0.016007	-0.00030103	NaN	78.149	50	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3228800	+		24956	8649	12423	12478							0.09728118971031563
PISQGGIHGR	10	Unmodified	_PISQGGIHGR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1891662478447	3	341.189435	1020.54648	-2.7927	-0.00095284	3.4988	0.0011938	0.70612	0.00024092	341.19073076742836	11.124	0.80174	11.124	10.619	11.42	0					38	25	2	0	0	0	0.63205	2	4561	4561;4656		18.721	11.62	1	554290			24957	3217	12424	12479	28716;28717	28716					0.0370251025184416
PISQGGIHGR	10	Unmodified	_PISQGGIHGR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1892272830009	3	341.189435	1020.54648	-0.34437	-0.0001175	0.76992	0.00026269	0.42555	0.00014519	341.1897854549036	11.107	0.27252	11.189	11	11.273	0.082325					12	9	2	0	0	0	0.82019	1	4598	4598		12.873	5.5834	1	238570			24958	3217	12424	12479	28718	28718					0.0370251025184416
PISQGGIHGR	10	Unmodified	_PISQGGIHGR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	341.189435	1020.54648	-0.45245	-0.00015437	2.2034	0.00075178	1.751	0.00059741	341.1903182727189	10.196	0.15754	10.94	10.856	11.014	0.74462	-0.14404	0.00010317	NaN	18.721	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218140			24959	3217	12424	12479							0.0370251025184416
PISSCSDP	8	Unmodified	_PISSCSDP_					0	0	0		nc|ENSG00000144868|Q6UXF1-2|TMEM108	nc|ENSG00000144868|Q6UXF1-2|TMEM108	nc|ENSG00000144868|Q6UXF1-2|TMEM108	MSMS	GG20161007_CRH_Patient100_A02_02	2	403.1758300662041	2	403.173461	804.332369	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.98	1	104.04	103.54	104.54	0.059502								0	0	0	1.0178	1	43759	43759		5.2307	2.6532	1				24960	7888	12425	12480	28719	28719					-0.07762377959079458
PITFLISQN	9	Unmodified	_PITFLISQN_					0	0	0			REV__ENSG00000157423|ENST00000393567|HYDIN	REV__ENSG00000157423|ENST00000393567|HYDIN	MSMS	GG20161007_CRH_Patient100_A02_02	2	516.7912475466728	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.436	1	65.763	65.263	66.263	0.32689								0	0	0	0.30487	1	27401	27401		18.135	0	1		+		24961	10538	12426	12481	28720	28720					0.05062627103075101
PITGSEIVAI	10	Unmodified	_PITGSEIVAI_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;nc|ENSG999|O00370|L1_ORF2;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|9|1|sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|34|1|sense;L1PA2_dup23|chr1:43114528-43120516:-|1.3533449411662286|0.3152228216366226|2.1|404.0|21|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2903015017509	2	500.289682	998.564812	0.79961	0.00040004	0.46544	0.00023286	1.2651	0.00063289	500.2894723103207	30.724	0.30984	32.006	31.811	32.121	1.2825					20	9	3	0	0	0	0.17319	1	12901	12901		52.268	15.762	1	1297300			24962	7674;7743	12427	12482	28721	28721					0.06547207383187015
PITGSEIVAI	10	Unmodified	_PITGSEIVAI_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;nc|ENSG999|O00370|L1_ORF2;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|9|1|sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|34|1|sense;L1PA2_dup23|chr1:43114528-43120516:-|1.3533449411662286|0.3152228216366226|2.1|404.0|21|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|57|1|sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|150|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2898437380791	2	500.289682	998.564812	0.60805	0.0003042	-0.16242	-8.1256E-05	0.44564	0.00022295	500.28922467077666	30.214	0.33948	32.029	31.8	32.139	1.8151					17	10	2	0	0	0	0.19223	1	12666	12666		49.933	13.806	1	1454200			24963	7674;7743	12427	12482	28722	28722					0.06547207383187015
PITIITTK	8	Unmodified	_PITIITTK_					0	0	0		nc|ENSG00000172534|P51610-2|HCFC1;ENSG00000172534|ENST00000310441|HCFC1;nc|ENSG00000172534|P51610-4|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	nc|ENSG00000172534|P51610-2|HCFC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7841674685478	2	443.784036	885.553519	2.5711	0.001141	-1.0351	-0.00045934	1.536	0.00068165	443.78334326365166	83.245	0.46797	84.433	84.142	84.61	1.1879					38	14	4	0	0	0	0.89008	1	34934	34934		2.5775	0	1	2563000			24964	4243	12428	12483	28723	28723					0.10616430079687689
PITNTVFFL	9	Unmodified	_PITNTVFFL_					0	0	0			REV__nc|ENSG00000262628|P47884|OR1D4	REV__nc|ENSG00000262628|P47884|OR1D4	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.1967346072197	3	351.198937	1050.57498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.345	1	82.345	81.845	82.845	0								0	0	0	0.42693	1	34305	34305		0.26902	0	1		+		24965	11414	12429	12484	28724	28724					0.05171815108406008
PIVFATHR	8	Unmodified	_PIVFATHR_					0	0	0			REV__ENSG00000135972|ENST00000258455|MRPS9	REV__ENSG00000135972|ENST00000258455|MRPS9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.7735778689384	2	470.771794	939.529036	1.4613	0.00068793	1.6132	0.00075947	3.0745	0.0014474	470.7726298055056	23.508	0.18386	23.508	23.412	23.596	0					8	5	2	0	0	0	0.89008	1	9803	9803		2.5775	0	1	423890	+		24966	9965	12430	12485	28725	28725					0.05685214716845621
PIVFATHR	8	Unmodified	_PIVFATHR_					0	0	0			REV__ENSG00000135972|ENST00000258455|MRPS9	REV__ENSG00000135972|ENST00000258455|MRPS9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	470.771794	939.529036	1.4613	0.00068793	1.6132	0.00075947	3.0745	0.0014474	470.7726298055056	23.508	0.18386	23.508	23.412	23.596	0	0	0	NaN	2.5775	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	423890	+		24967	9965	12430	12485							0.05685214716845621
PIVFKKRF	8	Unmodified	_PIVFKKRF_					0	0	0			REV__ENSG00000135423|ENST00000311966|GLS2	REV__ENSG00000135423|ENST00000311966|GLS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.5556213259697	3	345.555167	1033.64367	1.4066	0.00048606	0.12887	4.4533E-05	1.5355	0.00053059	345.5550580529687	40.077	0.73825	41.94	41.433	42.171	1.8624					60	23	3	0	0	0	0.89152	1	16783	16783		1.6526	0	1	2774400	+		24968	9940	12431	12486	28726	28726					0.12819524198789622
PIVFKLML	8	Unmodified	_PIVFKLML_					0	0	0			REV__ENSG00000111647|ENST00000279907|BLTP3B	REV__ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3083373904228	2	480.801174	959.587796	2.4865	0.0011955	-1.454	-0.00069911	1.0324	0.0004964	480.80054811015805	78.785	1.372	79.095	78.674	80.046	0.30933					109	43	5	0	0	0	0.88504	1	32794	32794		5.7604	0	1	268820000	+		24969	9334	12432	12487	28727	28727					0.10638554966953961
PIVFKLML	8	Unmodified	_PIVFKLML_					0	0	0			REV__ENSG00000111647|ENST00000279907|BLTP3B	REV__ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.801174	959.587796	2.5977	0.001249	-0.5558	-0.00026723	2.0419	0.00098175	480.8008987539437	77.933	0.82516	79.213	78.823	79.649	1.2809	-0.011121	0.00029777	NaN	5.7604	89	26	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	134790000	+		24970	9334	12432	12487							0.10638554966953961
PIVLFTCLL	9	Unmodified	_PIVLFTCLL_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.8870117068291	2	509.803914	1017.59328	3.0265	0.0015429	-0.65307	-0.00033294	2.3735	0.00121	509.803568995566	79.843	0.18373	81.094	81.017	81.201	1.2512					7	5	2	0	0	0	0.116	1	33519	33519		2.3027	0	1	466770	+		24971	14192	12433	12488	28728	28728					0.08518233758763927
PIVLFTCLL	9	Unmodified	_PIVLFTCLL_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	509.803914	1017.59328	2.2372	0.0011405	-2.9246	-0.001491	-0.68746	-0.00035047	509.80300550349807	81.414	0.26652	81.414	81.288	81.554	0	0.1319	-0.0028644	NaN	2.3027	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	682870	+		24972	14192	12433	12488							0.08518233758763927
PIVLFTCLL	9	Unmodified	_PIVLFTCLL_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	509.803914	1017.59328	2.2124	0.0011279	0.95403	0.00048637	3.1665	0.0016143	509.8042711706052	81.219	0.24624	81.509	81.369	81.616	0.29056	0.22696	0.0010903	NaN	2.3027	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	584840	+		24973	14192	12433	12488							0.08518233758763927
PIVLFTCLL	9	Unmodified	_PIVLFTCLL_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|51|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	509.803914	1017.59328	1.9741	0.0010064	-5.6043	-0.0028571	-3.6302	-0.0018507	509.8022443866762	79.382	0.21517	81.112	80.965	81.18	1.7299	-0.17048	-0.0055966	NaN	2.3027	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358450	+		24974	14192	12433	12488							0.08518233758763927
PIVLKLLRQ	9	Unmodified	_PIVLKLLRQ_					0	0	0		ENSG00000166266|ENST00000393094|CUL5;ENST00000526303.1_1_11:107879891-107917117:+|nuORF	ENSG00000166266|ENST00000393094|CUL5	ENSG00000166266|ENST00000393094|CUL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1080.565112292767	1	1079.72993	1078.72265	1.0628	0.0011476	3.8076	0.0041112	4.8704	0.0052587	1080.7334937670528	35.188	0.10922	37.006	36.932	37.041	1.8176					10	9	2	0	0	0	0.83213	1	14741	14741		2.0598	0	1	4909800			24975	3891	12434	12489	28729	28729					0.18643751433069156
PIVWDRKRRR	10	Unmodified	_PIVWDRKRRR_					0	0	0			REV__nc|ENSG00000179242|P55283-2|CDH4	REV__nc|ENSG00000179242|P55283-2|CDH4	MSMS	GG20161007_CRH_Patient100_W632_02	4	691.4188110232353	2	691.418011	1380.82147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.479	1	85.117	84.617	85.617	1.6379								0	0	0	0.66155	1	35014	35014		1.8442	0.36234	1		+		24976	11272	12435	12490	28730	28730					0.14629167450652858
PKAAAINL	8	Unmodified	_PKAAAINL_					0	0	0			REV__nc|ENSG00000159140|P18583-2|SON	REV__nc|ENSG00000159140|P18583-2|SON	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2486450076103	2	399.247621	796.480688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.57	1	110.73	110.23	111.23	0.15228								0	0	0	1.0178	1	47944	47944		0	0	1		+		24977	10569	12436	12491	28731	28731					0.07430721076923419
PKAAKRLFL	9	Unmodified	_PKAAKRLFL_					0	0	0			REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	REV__nc|ENSG00000176383|Q9C0J1-2|B3GNT4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3405639529228	2	522.339844	1042.66514	1.4551	0.00076007	0.40853	0.00021339	1.8637	0.00097346	522.3397232740605	106.09	0.1442	106.09	106.03	106.17	0					24	6	5	0	0	0	0.85019	1	45236	45236		0.52476	0	1	162960000	+		24978	11179	12437	12492	28732	28732					0.14550909227500597
PKGAGMAG	8	Unmodified	_PKGAGMAG_					0	0	0		ENSG00000126767|ENST00000376983|ELK1	ENSG00000126767|ENST00000376983|ELK1	ENSG00000126767|ENST00000376983|ELK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	688.3430663943291	1	688.344671	687.337395	2.1842	0.0015035	-2.5562	-0.0017596	-0.37205	-0.0002561	688.3430510131295	60.289	0.47123	60.617	60.32	60.792	0.32809					21	14	2	0	0	0	0.89008	1	25270	25270		2.5775	0	1	764820			24979	2314	12438	12493	28733	28733					-0.01878029305794371
PKGALKKLIH	10	Unmodified	_PKGALKKLIH_					0	0	0		nc|ENSG00000232872|Q8IX95|CTAGE3P;CTAGE9|p.M608Ifs*4|1|0.64|ENSG00000236761|chr6:131709175-131709194|ATTGCCCTGGTGGAGGAAAC/-|frameshift_variant;nc|ENSG00000150527|Q96PC5-6|MIA2;nc|ENSG00000150527|Q96PC5-11|MIA2;nc|ENSG00000150527|Q96PC5-13|MIA2;nc|ENSG00000150527|Q96PC5-5|MIA2;ENSG00000212710|ENST00000391403|CTAGE1;nc|ENSG00000150527|Q96PC5-8|MIA2;nc|ENSG00000150527|Q96PC5-10|MIA2;nc|ENSG00000150527|Q96PC5-9|MIA2;ENSG00000236761|ENST00000314099|CTAGE9;nc|ENSG00000150527|Q96PC5-14|MIA2;nc|ENSG00000150527|Q96PC5-7|MIA2;nc|ENSG00000150527|Q96PC5-12|MIA2;ENSG00000150527|ENST00000640607|MIA2	nc|ENSG00000232872|Q8IX95|CTAGE3P	nc|ENSG00000232872|Q8IX95|CTAGE3P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8669921755791	2	552.866226	1103.7179	2.713	0.0014999	-2.1276	-0.0011763	0.58541	0.00032365	552.8650333673814	106.04	0.15053	106.1	106.02	106.17	0.05455					19	6	4	0	0	0	0.89803	1	45137	45137		0.40072	0.40072	1	222710000			24980	382	12439	12494	28734	28734					0.170188672903123
PKGARGTR	8	Unmodified	_PKGARGTR_					0	0	0		nc|ENSG00000171502|Q17RW2-2|COL24A1;ENSG00000171502|ENST00000370571|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	nc|ENSG00000171502|Q17RW2-2|COL24A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7516052126884	2	421.751393	841.488233	0.76324	0.0003219	0.010193	4.299E-06	0.77343	0.00032619	421.7513746790956	71.908	0.60112	71.908	71.636	72.237	0					49	18	4	0	0	0	0.89178	1	29957	29957		0.69038	0	1	23435000			24981	4194	12440	12495	28735	28735					0.061148733972345326
PKGARRGA	8	Unmodified	_PKGARRGA_					0	0	0			REV__ENST00000334350.6_1_16:56691630-56693012:+|nuORF	REV__ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.7468749880791	2	406.746111	811.477669	0.42729	0.0001738	1.0353	0.00042109	1.4626	0.00059489	406.7465581878073	78.49	0.56684	78.49	78.251	78.818	0					40	17	3	0	0	0	0.89051	1	32688	32688		2.3027	0	1	4907600	+		24982	12462	12441	12496	28736	28736					0.06438890742799686
PKGARRGA	8	Unmodified	_PKGARRGA_					0	0	0			REV__ENST00000334350.6_1_16:56691630-56693012:+|nuORF	REV__ENST00000334350.6_1_16:56691630-56693012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.7469360232353	2	406.746111	811.477669	1.9394	0.00078885	0.02478	1.0079E-05	1.9642	0.00079893	406.74612130892785	78.277	0.57201	78.586	78.323	78.895	0.30933					42	17	3	0	0	0	0.89051	2	32710	32710;32759		2.3027	0	1	5891600	+		24983	12462	12441	12496	28737;28738	28737					0.06438890742799686
PKGGACIK	8	Unmodified	_PKGGACIK_					0	0	0			REV__ENSG00000161551|ENST00000638348|ZNF577	REV__ENSG00000161551|ENST00000638348|ZNF577	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	387.2844421267509	2	387.220549	772.426544	3.02	0.0011694	-0.54741	-0.00021197	2.4726	0.00095745	387.2201801366092	107.86	0.12173	108.02	107.96	108.08	0.15795					10	6	2	0	0	0	2.3239	1	46446	46446		0	0	1	32034000	+		24984	10620	12442	12497	28739	28739					0.031228056537202065
PKGGAKGA	8	Unmodified	_PKGGAKGA_					0	0	0			REV__ENSG00000097007|ENST00000318560|ABL1	REV__ENSG00000097007|ENST00000318560|ABL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2036010622978	2	343.203213	684.391873	1.897	0.00065107	-1.2124	-0.00041611	0.68461	0.00023496	343.20267499535055	107.84	0.16906	107.99	107.92	108.08	0.15781					19	10	2	0	0	0	0.89178	1	46504	46504		0.69038	0	1	92032000	+		24985	8940	12443	12498	28740	28740					0.03705305837274864
PKGGAKGA	8	Unmodified	_PKGGAKGA_					0	0	0			REV__ENSG00000097007|ENST00000318560|ABL1	REV__ENSG00000097007|ENST00000318560|ABL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.3029357790947	2	343.203213	684.391873	2.756	0.00094586	-2.9119	-0.00099937	-0.15591	-5.351E-05	343.20212405300646	107.84	0.16032	107.99	107.9	108.06	0.15795					15	8	2	0	0	0	2.3239	1	46378	46378		0.69038	0	1	89954000	+		24986	8940	12443	12498	28741	28741					0.03705305837274864
PKGGAKGA	8	Unmodified	_PKGGAKGA_					0	0	0			REV__ENSG00000097007|ENST00000318560|ABL1	REV__ENSG00000097007|ENST00000318560|ABL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	343.203213	684.391873	1.897	0.00065107	-1.2124	-0.00041611	0.68461	0.00023496	343.20267499535055	107.84	0.16906	107.99	107.92	108.08	0.15781	0.00012319	0.00059011	NaN	0.69038	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92032000	+		24987	8940	12443	12498							0.03705305837274864
PKGGGPGK	8	Unmodified	_PKGGGPGK_					0	0	0		ENST00000480182.1_1_2:130940128-130948196:+|nuORF;ENSG00000173272|ENST00000309451|MZT2A;ENSG00000152082|ENST00000281871|MZT2B;ENST00000410036.2_1_2:132241636-132250313:-|nuORF	ENST00000480182.1_1_2:130940128-130948196:+|nuORF	ENST00000480182.1_1_2:130940128-130948196:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.3988525271416	1	697.39915	696.391873	2.5079	0.001749	-3.2792	-0.0022869	-0.77125	-0.00053787	697.3969107698	85.458	0.52779	85.71	85.354	85.882	0.25227					26	16	2	0	0	0	0.89178	2	35692	35692;35742		0.69038	0	1	1022900			24988	3311	12444	12499	28742;28743	28742					0.0315330583728155
PKGGPAAL	8	Unmodified	_PKGGPAAL_					0	0	0		AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant;ENSG00000178171|ENST00000321420|AMER3	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	355.7127868533134	2	355.713414	709.412274	-0.60313	-0.00021454	-1.7624	-0.0006269	-2.3655	-0.00084144	355.71282830834576	61.537	0.47302	61.537	61.331	61.804	0					34	14	3	0	0	0	0.89178	2	25660	25660;25699		0.69038	0	1	9138200			24989	59	12445	12500	28744;28745	28744					0.04594476497072719
PKGGPAAL	8	Unmodified	_PKGGPAAL_					0	0	0		AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant;ENSG00000178171|ENST00000321420|AMER3	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.4194213747978	1	710.419551	709.412274	1.9925	0.0014155	-2.1257	-0.0015101	-0.13317	-9.461E-05	710.4174152347438	59.334	0.58071	60.753	60.409	60.99	1.4196					27	18	2	0	0	0	0.89176	1	24826	24826		0.79363	0	1	2696800			24990	59	12445	12500	28746	28746					0.04594476497072719
PKGGPAAL	8	Unmodified	_PKGGPAAL_					0	0	0		AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant;ENSG00000178171|ENST00000321420|AMER3	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	AMER3|p.R196Gfs*70|1|0.53|ENSG00000178171|chr2:130762652-130762652|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	355.7128784060478	2	355.713414	709.412274	1.7557	0.00062453	-3.3916	-0.0012064	-1.6359	-0.00058191	355.7122667858748	60.453	0.52407	61.873	61.597	62.121	1.4196					38	16	3	0	0	0	0.89178	1	25352	25352		0.69038	0	1	5771600			24991	59	12445	12500	28747	28747					0.04594476497072719
PKGGRGAR	8	Unmodified	_PKGGRGAR_					0	0	0		ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-4|CORO7;ENSG00000262246|ENST00000251166|CORO7;nc|ENSG00000262246|P57737-3|CORO7	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7386657595634	2	399.738286	797.462019	0.12441	4.9732E-05	1.3997	0.0005595	1.5241	0.00060923	399.73916879368096	67.742	0.684	67.742	67.231	67.915	0					50	21	3	0	0	0	0.89051	1	28217	28217		2.3027	0	1	5696600			24992	5427	12446	12501	28748	28748					0.055186042257560075
PKGGRGAR	8	Unmodified	_PKGGRGAR_					0	0	0		ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-4|CORO7;ENSG00000262246|ENST00000251166|CORO7;nc|ENSG00000262246|P57737-3|CORO7	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7389099001884	2	399.738286	797.462019	0.079915	3.1945E-05	1.1161	0.00044616	1.196	0.00047811	399.7387640923591	68.605	0.53471	68.605	68.359	68.893	0					47	16	4	0	0	0	0.89051	1	28555	28555		2.3027	0	1	14166000			24993	5427	12446	12501	28749	28749					0.055186042257560075
PKGGRGAR	8	Unmodified	_PKGGRGAR_					0	0	0		ENST00000575531.5_1_16:4407102-4412712:-|nuORF;ENST00000575714.5_1_16:4408319-4455566:-|nuORF;nc|ENSG00000262246|P57737-2|CORO7;nc|ENSG00000262246|P57737-4|CORO7;ENSG00000262246|ENST00000251166|CORO7;nc|ENSG00000262246|P57737-3|CORO7	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	ENST00000575531.5_1_16:4407102-4412712:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7386657595634	2	399.738286	797.462019	1.0665	0.00042633	0.0026661	1.0658E-06	1.0692	0.0004274	399.73838009382416	67.236	0.55307	69.125	68.86	69.413	1.8889					44	17	3	0	0	0	0.89051	1	28198	28198		2.3027	0	1	9971000			24994	5427	12446	12501	28750	28750					0.055186042257560075
PKGGSLVP	8	Unmodified	_PKGGSLVP_					0	0	0			REV__tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	REV__tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7256347537041	2	377.726521	753.438489	-0.34093	-0.00012878	-1.4922	-0.00056364	-1.8331	-0.00069242	377.725753156684	65.238	0.53604	65.238	64.946	65.482	0					45	16	4	0	0	0	0.89051	2	27180	27180;27219		2.3027	0	1	10996000	+		24995	14788	12447	12502	28751;28752	28751					0.05190745668562613
PKGGSLVP	8	Unmodified	_PKGGSLVP_					0	0	0			REV__tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	REV__tr|A0A553SHE7|A0A553SHE7_NIACICysteinesynthaseOS=NialliacirculansOX=1397GN=cysKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7259704470634	2	377.726521	753.438489	1.8119	0.00068441	-2.9932	-0.0011306	-1.1813	-0.0004462	377.7251381737335	65.14	0.5122	65.467	65.162	65.674	0.32689					42	15	4	0	0	0	0.89051	1	27209	27209		2.3027	0	1	12239000	+		24996	14788	12447	12502	28753	28753					0.05190745668562613
PKGIGKLK	8	Unmodified	_PKGIGKLK_					0	0	0			REV__nc|ENSG00000075651|Q13393-4|PLD1	REV__nc|ENSG00000075651|Q13393-4|PLD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5685912966728	1	840.566549	839.559273	2.9135	0.002449	-0.64598	-0.00054299	2.2675	0.001906	840.5658582411289	106.18	0.33266	106.34	106.12	106.45	0.15781					42	17	5	0	0	0	0.89178	2	45384	45384;45459		0.69038	0	1	697290000	+		24997	8765	12448	12503	28754;28755	28754					0.133075733820192
PKGIGKLK	8	Unmodified	_PKGIGKLK_					0	0	0			REV__nc|ENSG00000075651|Q13393-4|PLD1	REV__nc|ENSG00000075651|Q13393-4|PLD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	840.566549	839.559273	2.9135	0.002449	-0.64598	-0.00054299	2.2675	0.001906	840.5658582411289	106.18	0.33266	106.34	106.12	106.45	0.15781	0.091687	0.00021208	NaN	0.69038	42	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	697290000	+		24998	8765	12448	12503							0.133075733820192
PKGIGKLK	8	Unmodified	_PKGIGKLK_					0	0	0			REV__nc|ENSG00000075651|Q13393-4|PLD1	REV__nc|ENSG00000075651|Q13393-4|PLD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	840.566549	839.559273	3.0335	0.0025499	-3.3778	-0.0028393	-0.34432	-0.00028942	840.5648408811331	106	0.11485	106.16	106.09	106.2	0.16174	-0.091687	-0.0020842	NaN	0.69038	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20996000	+		24999	8765	12448	12503							0.133075733820192
PKGKATPT	8	Unmodified	_PKGKATPT_					0	0	0			REV__ENST00000503074.1_1_5:35700583-35709228:+|nuORF	REV__ENST00000503074.1_1_5:35700583-35709228:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	799.4697753787041	1	799.467229	798.459953	2.8884	0.0023092	-1.1301	-0.00090347	1.7583	0.0014057	799.4668687593663	107.7	0.14792	107.85	107.75	107.9	0.15795					16	7	3	0	0	0	0.89178	1	46319	46319		0.69038	0	1	98950000	+		25000	10425	12449	12504	28756	28756					0.05266130697259541
PKGKDKAR	8	Unmodified	_PKGKDKAR_					0	0	0			REV__FAT1|p.V2563Sfs*5|1|0.19|ENSG00000083857|chr4:186618896-186618899|TCAC/-|frameshift_variant	REV__FAT1|p.V2563Sfs*5|1|0.19|ENSG00000083857|chr4:186618896-186618899|TCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2758361697197	2	450.274701	898.534849	2.842	0.0012797	-0.54925	-0.00024732	2.2928	0.0010324	450.27427004922237	76.175	1.3392	76.496	75.925	77.264	0.32163					108	42	5	0	0	0	0.89178	1	31902	31902		0.69038	0	1	239710000	+		25001	8836	12450	12505	28757	28757					0.08152313228504227
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	711.4157592654228	1	711.4148	710.407523	2.7026	0.0019227	-0.55097	-0.00039197	2.1516	0.0015307	711.4141260112807	107.83	0.17897	107.89	107.79	107.97	0.052452					23	9	3	0	0	0	0.89198	1	46207	46207		0	0	1	107650000	+		25002	13119	12451	12506	28758	28758					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2112304568291	2	356.211038	710.407523	2.4526	0.00087364	-1.9195	-0.00068374	0.53311	0.0001899	356.2102330879755	107.83	0.19848	107.89	107.79	107.99	0.052452					26	10	4	0	0	0	0.89198	1	46222	46222		0	0	1	218130000	+		25003	13119	12451	12506	28759	28759					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.2105895876884	2	356.211038	710.407523	1.9059	0.0006789	-1.01	-0.00035978	0.89588	0.00031912	356.2106417321787	107.81	0.21893	107.96	107.84	108.06	0.15781					39	12	4	0	0	0	0.89198	2	46425	46425;46498		0	0	1	1642599999.9999998	+		25004	13119	12451	12506	28760;28761	28760					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	711.4147216677666	1	711.4148	710.407523	2.6667	0.0018971	-0.82274	-0.00058531	1.8439	0.0013118	711.4139449424418	107.81	0.20724	107.96	107.84	108.05	0.15781					28	11	3	0	0	0	0.89198	2	46430	46430;46501		0	0	1	626880000	+		25005	13119	12451	12506	28762;28763	28762					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	711.4136840701103	1	711.4148	710.407523	2.5815	0.0018365	-0.92943	-0.00066121	1.6521	0.0011753	711.4138427173652	107.79	0.20206	107.95	107.83	108.03	0.15795					26	10	4	0	0	0	0.89198	2	46361	46361;46433		0	0	1	443920000	+		25006	13119	12451	12506	28764;28765	28764					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	356.2112304568291	2	356.211038	710.407523	2.8291	0.0010078	-2.1811	-0.00077694	0.64803	0.00023084	356.2101513848517	107.79	0.22126	107.95	107.81	108.03	0.15795					34	11	4	0	0	0	0.89178	2	46369	46369;46432		0.69038	0	1	1084700000	+		25007	13119	12451	12506	28766;28767	28766					0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	356.211038	710.407523	2.4526	0.00087364	-1.9195	-0.00068374	0.53311	0.0001899	356.2102330879755	107.83	0.19848	107.89	107.79	107.99	0.052452	-0.046685	-0.00029093	NaN	0.69038	26	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218130000	+		25008	13119	12451	12506							0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	356.211038	710.407523	1.9059	0.0006789	-1.01	-0.00035978	0.89588	0.00031912	356.2106417321787	107.81	0.21893	107.96	107.84	108.06	0.15781	0.031475	0.00035699	NaN	0.69038	39	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1642599999.9999998	+		25009	13119	12451	12506							0.0407359235431386
PKGKGGPA	8	Unmodified	_PKGKGGPA_					0	0	0			REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	REV__ENST00000448928.7_1_12:48741727-48744993:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	356.211038	710.407523	2.8291	0.0010078	-2.1811	-0.00077694	0.64803	0.00023084	356.2101513848517	107.79	0.22126	107.95	107.81	108.03	0.15795	0.01521	-0.00047733	NaN	0.69038	34	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1084700000	+		25010	13119	12451	12506							0.0407359235431386
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2728149294853	2	412.273638	822.532724	0.19771	8.1512E-05	-1.769	-0.00072933	-1.5713	-0.00064782	412.2727379521463	32.828	1.1148	32.828	31.916	33.031	0					63	35	2	0	0	0	0.89198	1	13643	13643		0	0	1	3032500			25011	2686	12452	12507	28768	28768					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2721740603447	2	412.273638	822.532724	0.2395	9.8741E-05	-2.7803	-0.0011462	-2.5408	-0.0010475	412.27230947665583	33.437	0.92465	33.437	33.296	34.221	0					51	29	2	0	0	0	0.89198	1	14111	14111		0	0	1	1897700			25012	2686	12452	12507	28769	28769					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	823.5417358279228	1	823.54	822.532724	2.7689	0.0022803	-0.88223	-0.00072655	1.8867	0.0015538	823.5390269388594	107.85	0.27182	107.9	107.75	108.02	0.052452					47	14	5	0	0	0	0.89198	1	46188	46188		0	0	1	1487199999.9999998			25013	2686	12452	12507	28770	28770					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2743713259697	2	412.273638	822.532724	2.9547	0.0012181	-0.64058	-0.0002641	2.3141	0.00095403	412.2733706471872	107.83	0.27182	107.89	107.75	108.02	0.052444					44	14	4	0	0	0	0.89198	1	46256	46256		0	0	1	1819999999.9999998			25014	2686	12452	12507	28771	28771					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	823.5426513552666	1	823.54	822.532724	2.8365	0.002336	-0.0094698	-7.7987E-06	2.827	0.0023282	823.5396985349861	106.19	0.16373	106.34	106.25	106.41	0.15781					24	8	4	0	0	0	0.89198	1	45403	45403		0	0	1	83148000			25015	2686	12452	12507	28772	28772					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2744018435478	2	412.273638	822.532724	2.9209	0.0012042	-0.85502	-0.0003525	2.0659	0.0008517	412.27347081278754	107.81	0.25902	107.96	107.83	108.08	0.15781					58	15	5	0	0	0	0.89198	3	46413	46413;46486;46550		0	0	1	10418000000			25016	2686	12452	12507	28773;28774;28775	28773					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	823.5424682497978	1	823.54	822.532724	2.8351	0.0023348	-1.1262	-0.00092745	1.7089	0.0014074	823.5384432806069	108.24	0.52005	108.39	108.29	108.81	0.15781					51	29	2	0	0	0	0.89198	2	46753	46753;46847		0	0	1	71016000			25017	2686	12452	12507	28776;28777	28776					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	823.5420410037041	1	823.54	822.532724	2.9756	0.0024505	-0.25362	-0.00020887	2.7219	0.0022416	823.5395081400189	106.15	0.16205	106.31	106.24	106.4	0.16174					23	8	4	0	0	0	0.89198	1	45329	45329		0	0	1	71535000			25018	2686	12452	12507	28778	28778					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2740661501884	2	412.273638	822.532724	3.1763	0.0013095	-1.4134	-0.00058272	1.7629	0.00072679	412.2732620862144	107.79	0.29387	107.95	107.81	108.1	0.15795					56	16	5	0	0	0	0.89198	2	46345	46345;46420		0	0	1	7411399999.999999			25019	2686	12452	12507	28779;28780	28779					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	823.5453369021416	1	823.54	822.532724	2.973	0.0024484	-1.8115	-0.0014918	1.1615	0.00095651	823.5384294527175	107.79	0.28899	107.95	107.79	108.08	0.15795					55	15	5	0	0	0	0.89198	1	46487	46487		0	0	1	7862699999.999999			25020	2686	12452	12507	28781	28781					0.11435884490674653
PKGKPLAL	8	Unmodified	_PKGKPLAL_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	412.2755615115166	2	412.273638	822.532724	3.1791	0.0013107	-0.29915	-0.00012333	2.88	0.0011873	412.27350480358695	106.16	0.19696	106.32	106.2	106.4	0.16174					33	10	5	0	0	0	2.3239	1	45385	45385		2.5775	1.7838	1	339400000			25021	2686	12452	12507	28782	28782					0.11435884490674653
PKGLLFVS	8	Unmodified	_PKGLLFVS_					0	0	0		tr|A0A7D6W474|A0A7D6W474_9CLOT50SribosomalproteinL11methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17225PE=4SV=1	tr|A0A7D6W474|A0A7D6W474_9CLOT50SribosomalproteinL11methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17225PE=4SV=1	tr|A0A7D6W474|A0A7D6W474_9CLOT50SribosomalproteinL11methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17225PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.7677184939384	2	430.765646	859.516739	3.1203	0.0013441	0.41981	0.00018084	3.5401	0.001525	430.7660095221518	101.31	0.12447	101.38	101.3	101.42	0.067009					7	3	3	0	0	0	0.89178	1	42428	42428		0.69038	0	1	2625000			25022	17047	12453	12508	28783	28783					0.08136178253812432
PKGLLLVQ	8	Unmodified	_PKGLLLVQ_					0	0	0			REV__ENST00000515577.1_1_5:126478784-126478904:-|nuORF	REV__ENST00000515577.1_1_5:126478784-126478904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2884399294853	2	434.286746	866.558939	3.3048	0.0014352	0.72381	0.00031434	4.0286	0.0017496	434.28712181652304	105.99	0.11869	106.15	106.08	106.2	0.15859					9	5	2	0	0	0	0.89178	1	45285	45285		0.69038	0	1	28275000	+		25023	13600	12454	12509	28784	28784					0.12032153662187284
PKGLPAKL	8	Unmodified	_PKGLPAKL_					0	0	0		ENSG00000170458|ENST00000302014|CD14	ENSG00000170458|ENST00000302014|CD14	ENSG00000170458|ENST00000302014|CD14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2755004763603	2	412.273638	822.532724	2.9198	0.0012038	0.59364	0.00024474	3.5135	0.0014485	412.274355361286	108.21	0.58214	108.37	108.29	108.87	0.15781					46	32	2	0	0	0	0.89178	1	46726	46726		0.69038	0	1	44629000			25024	4146	12455	12510	28785	28785					0.1143588449069739
PKGPGPLA	8	Unmodified	_PKGPGPLA_					0	0	0			REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF	REV__ENST00000566665.1_1_16:10273773-10274277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	368.7203857302666	2	368.721239	735.427924	-0.44227	-0.00016308	-0.74995	-0.00027652	-1.1922	-0.0004396	368.72088612614806	58.8	0.7055	58.8	58.331	59.037	0					45	21	4	0	0	0	0.89178	1	24567	24567		0.69038	0	1	8354600	+		25025	13616	12456	12511	28786	28786					0.04962763014123084
PKGPTPLVLKT	11	Unmodified	_PKGPTPLVLKT_					0	0	0			REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8636352419853	2	575.863349	1149.71214	1.3911	0.00080109	-0.0079085	-4.5542E-06	1.3832	0.00079654	575.8628537164144	96.846	0.18385	96.846	96.772	96.956	0					12	5	3	0	0	0	1.037	1	40493	40493		1.0715	0	1	1839000	+		25026	11691	12457	12512	28787	28787					0.14327723987958052
PKGPTPLVLKT	11	Unmodified	_PKGPTPLVLKT_					0	0	0			REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8652221560478	2	575.863349	1149.71214	2.6078	0.0015017	-0.32712	-0.00018837	2.2807	0.0013134	575.8631241930661	96.789	0.1888	96.894	96.785	96.974	0.105					8	5	2	0	0	0	1.037	1	40501	40501		1.0715	0	1	1819800	+		25027	11691	12457	12512	28788	28788					0.14327723987958052
PKGPTPLVLKT	11	Unmodified	_PKGPTPLVLKT_					0	0	0			REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	575.863349	1149.71214	1.3911	0.00080109	-0.0079085	-4.5542E-06	1.3832	0.00079654	575.8628537164144	96.846	0.18385	96.846	96.772	96.956	0	-0.024196	0.00021013	NaN	1.0715	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1839000	+		25028	11691	12457	12512							0.14327723987958052
PKGPTPLVLKT	11	Unmodified	_PKGPTPLVLKT_					0	0	0			REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	REV__ENST00000489787.1_1_20:48429459-48431791:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	575.863349	1149.71214	2.6078	0.0015017	-0.32712	-0.00018837	2.2807	0.0013134	575.8631241930661	96.789	0.1888	96.894	96.785	96.974	0.105	0.024196	-0.00015751	NaN	1.0715	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1819800	+		25029	11691	12457	12512							0.14327723987958052
PKGQLLVL	8	Unmodified	_PKGQLLVL_					0	0	0		ENSG00000119401|ENST00000450136|TRIM32	ENSG00000119401|ENST00000450136|TRIM32	ENSG00000119401|ENST00000450136|TRIM32	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2881042361259	2	434.286746	866.558939	3.1533	0.0013694	-0.79465	-0.00034511	2.3586	0.0010243	434.2864265691392	107.76	0.25307	107.82	107.69	107.95	0.052452					56	13	6	0	0	0	0.89178	1	46143	46143		0.69038	0	1	1158100000			25030	2068	12458	12513	28789	28789					0.12032153662175915
PKGQLLVL	8	Unmodified	_PKGQLLVL_					0	0	0		ENSG00000119401|ENST00000450136|TRIM32	ENSG00000119401|ENST00000450136|TRIM32	ENSG00000119401|ENST00000450136|TRIM32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2878600955009	2	434.286746	866.558939	3.3132	0.0014389	-1.4046	-0.00061001	1.9086	0.00082889	434.2863276613101	107.73	0.44734	107.89	107.56	108.01	0.15795					66	23	6	0	0	0	0.89178	2	46307	46307;46449		0.69038	0	1	10441000000			25031	2068	12458	12513	28790;28791	28790					0.12032153662175915
PKGQVSKR	8	Unmodified	_PKGQVSKR_					0	0	0		L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2758666872978	2	450.274701	898.534849	1.7318	0.0007798	0.6629	0.00029848	2.3947	0.0010783	450.27461721182567	76.387	1.305	76.387	75.884	77.189	0					116	41	5	0	0	0	0.89178	1	31739	31739		0.69038	0	1	220750000			25032	7688	12459	12514	28792	28792					0.08152313228515595
PKGQVSKR	8	Unmodified	_PKGQVSKR_					0	0	0		L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|117|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2765380740166	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.873	1	76.655	76.155	77.155	1.7817								0	0	0	1.0178	1	31406	31406		0.69038	0	1				25033	7688	12459	12514	28793	28793					0.08152313228515595
PKGRGLRK	8	Unmodified	_PKGRGLRK_					0	0	0		ENST00000525503.5_1_11:82996703-82996883:-|nuORF	ENST00000525503.5_1_11:82996703-82996883:-|nuORF	ENST00000525503.5_1_11:82996703-82996883:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3005859255791	2	456.29851	910.582468	3.3619	0.001534	2.0009	0.00091299	5.3627	0.002447	456.2996140620552	107.71	0.27245	107.87	107.72	107.99	0.15781					60	14	6	0	0	0	0.89178	1	46347	46347		0.69038	0	1	13685000000			25034	7118	12460	12515	28794	28794					0.1236001221936931
PKGRKRIG	8	Unmodified	_PKGRKRIG_					0	0	0		nc|ENSG00000174527|Q8N1T3|MYO1H;nc|ENSG00000174527|Q8N1T3-3|MYO1H;ENSG00000174527|ENST00000310903|MYO1H	nc|ENSG00000174527|Q8N1T3|MYO1H	nc|ENSG00000174527|Q8N1T3|MYO1H	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.2966491580009	2	456.29851	910.582468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.03	1	101.03	100.53	101.53	0								0	0	0	1.0178	1	42296	42296		0.69038	0	1				25035	7930	12461	12516	28795	28795					0.12360012219357941
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.2872497439384	3	454.284733	1359.83237	2.8572	0.001298	-1.5076	-0.0006849	1.3496	0.00061311	454.2846763822807	82.959	0.3974	83.229	82.909	83.306	0.27029					21	12	3	0	0	0	1.039	1	34678	34678		0.45452	0.35968	1	1516900	+		25036	12809	12462	12517	28796	28796					0.16684569824951723
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.2856017947197	3	454.284733	1359.83237	2.9444	0.0013376	1.0032	0.00045575	3.9476	0.0017934	454.28584183382605	83.356	1.3341	83.626	83.337	84.671	0.27029					54	42	2	0	0	0	1.039	2	34819	34819;34950		0.45452	0.29519	1	1237700	+		25037	12809	12462	12517	28797;28798	28797					0.16684569824951723
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.2868835330009	3	454.284733	1359.83237	3.5895	0.0016307	-0.42676	-0.00019387	3.1628	0.0014368	454.2851120060678	82.661	0.28638	83.874	83.634	83.92	1.2125					14	8	2	0	0	0	1.039	2	34639	34639;34708		0.45452	0.046251	1	1004600	+		25038	12809	12462	12517	28799;28800	28799					0.16684569824951723
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.2878906130791	3	454.284733	1359.83237	3.4241	0.0015555	1.2509	0.00056827	4.675	0.0021238	454.6189433081645	82.34	0.34268	84.01	83.831	84.173	1.67					18	10	2	0	0	0	1.039	1	34496	34496		0.45452	0.35968	1	1432100	+		25039	12809	12462	12517	28801	28801					0.16684569824951723
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	454.284733	1359.83237	2.2307	0.0010134	0.058486	2.6569E-05	2.2892	0.0010399	454.2856899107442	83.08	0.30553	83.08	82.922	83.228	0	-0.074468	0.0015177	NaN	0.45452	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	727560	+		25040	12809	12462	12517							0.16684569824951723
PKGRRPLPQRR	11	Unmodified	_PKGRRPLPQRR_					0	0	0			REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	REV__ENST00000393313.5_1_7:127032378-127032531:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	454.284733	1359.83237	2.8572	0.001298	-1.5076	-0.0006849	1.3496	0.00061311	454.2846763822807	82.959	0.3974	83.229	82.909	83.306	0.27029	0.074468	-0.0006167	NaN	0.45452	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1516900	+		25041	12809	12462	12517							0.16684569824951723
PKGRVRRKE	9	Unmodified	_PKGRVRRKE_					0	0	0		nc|ENSG00000116871|Q3KQU3-3|MAP7D1;ENST00000373148.5_1_1:36643158-36645856:+|nuORF;nc|ENSG00000116871|Q3KQU3-2|MAP7D1;nc|ENSG00000116871|Q3KQU3-4|MAP7D1;ENSG00000116871|ENST00000474796|MAP7D1;nc|ENSG00000116871|Q3KQU3|MAP7D1	nc|ENSG00000116871|Q3KQU3-3|MAP7D1	nc|ENSG00000116871|Q3KQU3-3|MAP7D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3534423708916	2	563.351806	1124.68906	2.2434	0.0012638	-0.10544	-5.9401E-05	2.138	0.0012044	563.3517014406947	83.206	0.98624	83.476	83.029	84.016	0.27029					60	31	3	0	0	0	0.85019	2	34818	34818;34979		0.52476	0	1	1708100			25042	1990	12463	12518	28802;28803	28802					0.13170142713875066
PKGSRRSV	8	Unmodified	_PKGSRRSV_					0	0	0		ENSG00000189120|ENST00000536300|SP6	ENSG00000189120|ENST00000536300|SP6	ENSG00000189120|ENST00000536300|SP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7656738162041	2	443.764501	885.514448	3.1071	0.0013788	-0.78716	-0.00034931	2.3199	0.0010295	443.764070847025	74.742	0.65372	75.066	74.74	75.393	0.32464					54	20	4	0	0	0	0.89178	1	31251	31251		0.69038	0	1	21147000			25043	4897	12464	12519	28804	28804					0.06711142568701689
PKGSRRSV	8	Unmodified	_PKGSRRSV_					0	0	0		ENSG00000189120|ENST00000536300|SP6	ENSG00000189120|ENST00000536300|SP6	ENSG00000189120|ENST00000536300|SP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7657348513603	2	443.764501	885.514448	3.6589	0.0016237	-0.077955	-3.4594E-05	3.5809	0.0015891	443.764214016992	72.966	0.83315	74.295	73.672	74.506	1.3298					53	26	3	0	0	0	0.89178	1	30596	30596		0.69038	0	1	3650100			25044	4897	12464	12519	28805	28805					0.06711142568701689
PKGSTKGA	8	Unmodified	_PKGSTKGA_					0	0	0		tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.2131530642509	2	373.213778	744.413003	-0.31195	-0.00011642	-1.2932	-0.00048262	-1.6051	-0.00059905	373.2131797754171	63.817	0.49053	63.817	63.556	64.046	0					29	15	2	0	0	0	0.8909	1	26585	26585		2.0598	0	1	16079000			25045	16229	12465	12520	28806	28806					0.030572711461331892
PKGSTKGA	8	Unmodified	_PKGSTKGA_					0	0	0		tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	373.2134277224541	2	373.213778	744.413003	2.0001	0.00074647	-2.7122	-0.0010122	-0.71206	-0.00026575	373.2125917109947	62.587	0.45082	64	63.775	64.226	1.4134					26	14	2	0	0	0	0.8909	1	26240	26240		2.0598	0	1	9264000			25046	16229	12465	12520	28807	28807					0.030572711461331892
PKGSTKGA	8	Unmodified	_PKGSTKGA_					0	0	0		tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	tr|A0A553SJ54|A0A553SJ54_NIACIRibonucleaseROS=NialliacirculansOX=1397GN=rnrPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.2129394412041	2	373.213778	744.413003	2.8162	0.001051	-3.1129	-0.0011618	-0.29673	-0.00011074	373.21230832213695	62.238	1.4902	64.195	63.305	64.795	1.9571					74	47	3	0	0	0	0.8909	1	26106	26106		2.0598	0	1	6385700			25047	16229	12465	12520	28808	28808					0.030572711461331892
PKGSTLKV	8	Unmodified	_PKGSTLKV_					0	0	0		ENST00000550023.5_1_12:75900251-75905383:-|nuORF	ENST00000550023.5_1_12:75900251-75905383:-|nuORF	ENST00000550023.5_1_12:75900251-75905383:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2596923708916	2	415.260728	828.506903	2.0156	0.000837	-3.4747	-0.0014429	-1.4591	-0.00060592	415.2591388800214	78.305	0.54134	78.614	78.323	78.864	0.30932					36	16	3	0	0	0	0.8909	1	32690	32690		2.0598	0	1	3099800			25048	7257	12466	12521	28809	28809					0.08578990248417995
PKGTAALP	8	Unmodified	_PKGTAALP_					0	0	0			REV__ENSG00000100038|ENST00000357179|TOP3B	REV__ENSG00000100038|ENST00000357179|TOP3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7259094119072	2	377.726521	753.438489	1.8119	0.00068441	-2.9932	-0.0011306	-1.1813	-0.0004462	377.7251381737335	65.14	0.5122	65.467	65.162	65.674	0.32689					42	15	4	0	0	0	0.89008	1	27294	27294		2.5775	0	1	12239000	+		25049	8964	12467	12522	28810	28810					0.05190745668551244
PKGTAALP	8	Unmodified	_PKGTAALP_					0	0	0			REV__ENSG00000100038|ENST00000357179|TOP3B	REV__ENSG00000100038|ENST00000357179|TOP3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7260009646416	2	377.726521	753.438489	2.459	0.00092884	-3.3504	-0.0012655	-0.89135	-0.00033668	377.7248672158315	62.644	0.88928	64.588	63.955	64.845	1.9444					47	28	3	0	0	0	0.89008	1	26267	26267		2.5775	0	1	3993900	+		25050	8964	12467	12522	28811	28811					0.05190745668551244
PKGTIVLA	8	Unmodified	_PKGTIVLA_					0	0	0		nc|ENSG00000106853|Q14914-2|PTGR1;ENSG00000106853|ENST00000407693|PTGR1	nc|ENSG00000106853|Q14914-2|PTGR1	nc|ENSG00000106853|Q14914-2|PTGR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7574035525322	2	399.757821	797.501089	1.7132	0.00068487	-2.9458	-0.0011776	-1.2326	-0.00049273	399.7567572170434	76.951	0.57436	78.719	78.419	78.993	1.7672					37	17	4	0	0	0	0.89178	1	32279	32279		0.69038	0	1	3602900			25051	1587	12468	12523	28812	28812					0.09423891736742007
PKGTLPPA	8	Unmodified	_PKGTLPPA_					0	0	0		ENST00000523845.5_1_7:44260423-44302632:-|nuORF;nc|ENSG00000058404|Q13554-3|CAMK2B;nc|ENSG00000058404|Q13554-8|CAMK2B;nc|ENSG00000058404|Q13554-5|CAMK2B;ENST00000497584.5_1_7:44259663-44373862:-|nuORF;nc|ENSG00000058404|Q13554-2|CAMK2B;ENSG00000058404|ENST00000395749|CAMK2B	ENST00000523845.5_1_7:44260423-44302632:-|nuORF	ENST00000523845.5_1_7:44260423-44302632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	780.4612914919853	1	780.461416	779.454139	2.4988	0.0019502	-2.9549	-0.0023062	-0.45611	-0.00035598	780.4590797200135	60.87	0.39702	62.835	62.607	63.004	1.9653					22	12	2	0	0	0	0.89051	1	25563	25563		2.3027	0	1	2866500			25052	735	12469	12524	28813	28813					0.05559032185601609
PKGVGALN	8	Unmodified	_PKGVGALN_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2253295779228	2	378.224146	754.433738	2.6474	0.0010013	-0.17591	-6.6534E-05	2.4715	0.00093479	378.22400609056416	107.76	0.21664	107.81	107.71	107.93	0.052452					25	11	3	0	0	0	0.89178	1	46182	46182		0.69038	0	1	86437000	+		25053	10496	12470	12525	28814	28814					0.04669861525792385
PKGVGALN	8	Unmodified	_PKGVGALN_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2242919802666	2	378.224146	754.433738	2.3231	0.00087867	-0.6385	-0.00024149	1.6846	0.00063718	378.2238323456355	107.75	0.2193	107.91	107.79	108.01	0.15781					32	11	4	0	0	0	0.89178	1	46472	46472		0.69038	0	1	1147900000	+		25054	10496	12470	12525	28815	28815					0.04669861525792385
PKGVGALN	8	Unmodified	_PKGVGALN_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2246581912041	2	378.224146	754.433738	2.9654	0.0011216	-1.4642	-0.00055379	1.5012	0.00056779	378.2236283476102	107.73	0.20406	107.89	107.77	107.98	0.15796					31	10	4	0	0	0	0.89178	2	46343	46343;46410		0.69038	0	1	770360000	+		25055	10496	12470	12525	28816;28817	28816					0.04669861525792385
PKGVGALN	8	Unmodified	_PKGVGALN_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	378.224146	754.433738	2.6474	0.0010013	-0.17591	-6.6534E-05	2.4715	0.00093479	378.22400609056416	107.76	0.21664	107.81	107.71	107.93	0.052452	-0.057785	0.00047183	NaN	0.69038	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	86437000	+		25056	10496	12470	12525							0.04669861525792385
PKGVGALN	8	Unmodified	_PKGVGALN_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	378.224146	754.433738	2.9654	0.0011216	-1.4642	-0.00055379	1.5012	0.00056779	378.2236283476102	107.73	0.20406	107.89	107.77	107.98	0.15796	0.022056	-0.00050268	NaN	0.69038	31	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	770360000	+		25057	10496	12470	12525							0.04669861525792385
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7434875369072	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.129	1	75.129	74.629	75.629	0								0	0	0	1.0178	1	31278	31278		0.69038	0	1				25058	8003	12471	12526	28818	28818					0.08827622565263482
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7438232302666	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.339	1	75.339	74.839	75.839	0								0	0	0	1.0178	1	31365	31365		0.69038	0	1				25059	8003	12471	12526	28819	28819					0.08827622565263482
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7440063357353	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.887	1	75.212	74.712	75.712	0.32464								0	0	0	1.0178	1	31323	31323		0.69038	0	1				25060	8003	12471	12526	28820	28820					0.08827622565263482
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7441894412041	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.996	1	75.321	74.821	75.821	0.32464								0	0	0	1.0178	1	31369	31369		0.69038	0	1				25061	8003	12471	12526	28821	28821					0.08827622565263482
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7438232302666	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.09	1	75.414	74.914	75.914	0.32464								0	0	0	1.0178	1	31407	31407		0.69038	0	1				25062	8003	12471	12526	28822	28822					0.08827622565263482
PKGVGLLA	8	Unmodified	_PKGVGLLA_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7444335818291	2	377.744714	753.474875	2.5823	0.00097546	-2.0959	-0.0007917	0.48648	0.00018376	377.7431330932197	73.725	1.6226	75.521	74.278	75.9	1.7962					69	51	2	0	0	0	0.89178	1	30871	30871		0.69038	0	1	3559300			25063	8003	12471	12526	28823	28823					0.08827622565263482
PKGVGSPL	8	Unmodified	_PKGVGSPL_					0	0	0		ENST00000568223.6_1_16:767979-768486:+|nuORF	ENST00000568223.6_1_16:767979-768486:+|nuORF	ENST00000568223.6_1_16:767979-768486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7260314822197	2	377.726521	753.438489	1.7986	0.00067937	-2.3653	-0.00089343	-0.56669	-0.00021405	377.7251257779504	64.142	0.90231	64.471	63.788	64.691	0.32899					45	28	3	0	0	0	0.89178	1	26909	26909		0.69038	0	1	3046000			25064	7371	12472	12527	28824	28824					0.05190745668551244
PKGVGSPL	8	Unmodified	_PKGVGSPL_					0	0	0		ENST00000568223.6_1_16:767979-768486:+|nuORF	ENST00000568223.6_1_16:767979-768486:+|nuORF	ENST00000568223.6_1_16:767979-768486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7258178591728	2	377.726521	753.438489	1.8119	0.00068441	-2.9932	-0.0011306	-1.1813	-0.0004462	377.7251381737335	65.14	0.5122	65.467	65.162	65.674	0.32689					42	15	4	0	0	0	0.89178	1	27335	27335		0.69038	0	1	12239000			25065	7371	12472	12527	28825	28825					0.05190745668551244
PKGVITAN	8	Unmodified	_PKGVITAN_					0	0	0			REV__ENST00000536435.6_1_12:133779770-133780055:+|nuORF	REV__ENST00000536435.6_1_12:133779770-133780055:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	400.2379638552666	2	400.237253	798.459953	2.7086	0.0010841	-0.65749	-0.00026315	2.0511	0.00082092	400.23692453091076	107.71	0.18187	107.87	107.77	107.95	0.15781					24	9	3	0	0	0	0.89178	1	46373	46373		0.69038	0	1	704960000	+		25066	13753	12473	12528	28826	28826					0.05266130697259541
PKGVITAN	8	Unmodified	_PKGVITAN_					0	0	0			REV__ENST00000536435.6_1_12:133779770-133780055:+|nuORF	REV__ENST00000536435.6_1_12:133779770-133780055:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	400.2382995486259	2	400.237253	798.459953	3.1015	0.0012413	-1.9748	-0.00079039	1.1267	0.00045093	400.2364412569747	107.68	0.18375	107.84	107.74	107.92	0.15795					29	9	4	0	0	0	0.89178	2	46304	46304;46368		0.69038	0	1	439140000	+		25067	13753	12473	12528	28827;28828	28827					0.05266130697259541
PKGYMDLM	8	Unmodified	_PKGYMDLM_					0	0	0		ENST00000587807.5_1_18:54270260-54293401:-|nuORF;ENSG00000091164|ENST00000217515|TXNL1	ENST00000587807.5_1_18:54270260-54293401:-|nuORF	ENST00000587807.5_1_18:54270260-54293401:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	318.1963378787041	3	318.818963	953.43506	0.1932	6.1596E-05	-0.3592	-0.00011452	-0.166	-5.2923E-05	318.8201132532679	55.191	0.31328	56.6	56.449	56.763	1.4099					23	10	3	0	0	0	2.3239	1	23092	23092		0.40072	0	1	2565900			25068	1149	12474	12529	28829	28829					-0.04352008491957804
PKIKFHLGIL	10	Unmodified	_PKIKFHLGIL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2543823122978	3	389.253376	1164.7383	1.0817	0.00042104	1.3487	0.00052498	2.4303	0.00094602	389.2541690215735	29.295	0.78933	29.574	29.32	30.109	0.2793					99	25	5	0	0	0	0.89588	1	12239	12239		1.9064	0.1641	1	111390000	+		25069	9320	12475	12530	28830	28830					0.16252037950107479
PKIKFHLGIL	10	Unmodified	_PKIKFHLGIL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3782836794853	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.913	1	29.192	28.692	29.692	1.2789								0	0	0	0.66222	1	11697	11697		1.6526	1.1279	1		+		25070	9320	12475	12530	28831	28831					0.16252037950107479
PKIKFHLGIL	10	Unmodified	_PKIKFHLGIL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2546264529228	3	389.253376	1164.7383	0.50243	0.00019557	1.7288	0.00067294	2.2312	0.00086851	389.2544596413454	27.379	0.9561	29.126	28.865	29.821	1.747					116	30	6	0	0	0	0.89588	2	11447	11447;11486		1.9064	1.1298	1	144500000	+		25071	9320	12475	12530	28832;28833	28832					0.16252037950107479
PKIKFHLGIL	10	Unmodified	_PKIKFHLGIL_					0	0	0			REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	REV__ENST00000544850.5_1_12:10758876-10761762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3774902224541	2	583.376426	1164.7383	0.74172	0.0004327	1.8151	0.0010589	2.5568	0.0014916	583.3771807550418	29.967	0.30749	31.782	31.584	31.892	1.8151					19	9	3	0	0	0	0.89803	1	12555	12555		1.6526	1.1279	1	2675800	+		25072	9320	12475	12530	28834	28834					0.16252037950107479
PKILKALTK	9	Unmodified	_PKILKALTK_					0	0	0			REV__tr|A0A553SH52|A0A553SH52_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_12165PE=4SV=1	REV__tr|A0A553SH52|A0A553SH52_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_12165PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.1630737185478	3	337.902344	1010.6852	2.9152	0.00098507	-2.4721	-0.00083534	0.4431	0.00014973	337.90149554494116	92.93	0.58948	93.801	93.344	93.933	0.87176					26	17	2	0	0	0	0.11954	1	39113	39113		0.26902	0	1	143170	+		25073	14778	12476	12531	28835	28835					0.18028660167442467
PKILPVLLLL	10	Unmodified	_PKILPVLLLL_					0	0	0			REV__ENSG00000106809|ENST00000375561|OGN	REV__ENSG00000106809|ENST00000375561|OGN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1006957888603	3	373.601894	1117.78385	-0.34004	-0.00012704	0.2486	9.2878E-05	-0.09144	-3.4162E-05	373.602772623766	58.262	0.16152	58.262	58.202	58.364	0					5	4	2	0	0	0	0.12561	1	24294	24294		0	0	1	397350	+		25074	9217	12477	12532	28836	28836					0.22967263412533612
PKIVEVPVLIK	11	Unmodified	_PKIVEVPVLIK_					0	0	0			REV__ENSG00000221866|ENST00000321063|PLXNA4	REV__ENSG00000221866|ENST00000321063|PLXNA4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	4	309.458788	1233.80605	-2.3329	-0.00072193	-0.77155	-0.00023876	-3.1044	-0.0009607	309.4585613893006	67.47	0.18619	67.47	67.318	67.504	0					8	5	2	0	0	0	0.14606	1	28080	28080		0.073264	0	1	126620	+		25075	11877	12478	12533	28837	28837					0.19849443090265595
PKIWLCLPF	9	Unmodified	_PKIWLCLPF_					0	0	0		ENST00000335154.9_1_12:50036614-50037331:-|nuORF	ENST00000335154.9_1_12:50036614-50037331:-|nuORF	ENST00000335154.9_1_12:50036614-50037331:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	558.3527709841728	2	558.817356	1115.62016	1.7403	0.00097249	2.5061	0.0014005	4.2464	0.002373	559.3205799516301	65.544	0.54855	67.452	67.218	67.767	1.9085					35	17	3	0	0	0	0.073431	1	27575	27575		36.044	15.173	1	2950200			25076	5907	12479	12534	28838	28838					0.06697342369943726
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.2632934451103	2	458.261594	914.508634	2.7762	0.0012722	0.36446	0.00016702	3.1407	0.0014392	458.26171325354375	86.906	0.91261	86.906	86.551	87.463	0					101	36	4	0	0	0	0.89008	5	36135	36135;36316;36383;36450;36514		2.5775	1.8871	1	102900000	+		25077	14729	12480	12535	28839;28840;28841;28842;28843	28839					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	458.2635070681572	2	458.261594	914.508634	3.2022	0.0014675	0.19407	8.8936E-05	3.3963	0.0015564	458.261642843789	86.882	0.9509	87.126	86.576	87.527	0.24387					107	37	4	0	0	0	0.89008	7	36165	36165;36218;36269;36324;36391;36452;36514		2.5775	1.8871	1	105820000	+		25078	14729	12480	12535	28844;28845;28846;28847;28848;28849;28850	28844					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2641784548759	2	458.261594	914.508634	2.9315	0.0013434	0.70497	0.00032306	3.6365	0.0016665	458.26168826906155	85.409	1.1205	86.567	86.303	87.423	1.159					124	45	4	0	0	0	0.89008	6	35777	35777;35828;35880;35934;36065;36169		2.5775	1.7838	1	78436000	+		25079	14729	12480	12535	28851;28852;28853;28854;28855;28856	28851					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2646057009697	2	458.261594	914.508634	3.568	0.0016351	-0.19319	-8.8531E-05	3.3748	0.0015466	458.2611050683286	86.398	0.54626	87.525	87.147	87.694	1.1265					49	21	3	0	0	0	0.89008	1	36480	36480		2.5775	0.27475	1	68529000	+		25080	14729	12480	12535	28857	28857					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2632934451103	2	458.261594	914.508634	3.36	0.0015397	-0.39572	-0.00018135	2.9642	0.0013584	458.26117479241805	85.106	1.1491	86.703	86.341	87.491	1.5962					144	46	4	0	0	0	0.89008	4	35710	35710;35762;35818;35883		2.5775	1.8871	1	73803000	+		25081	14729	12480	12535	28858;28859;28860;28861	28858					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2632629275322	2	458.261594	914.508634	4.0691	0.0018647	0.08617	3.9489E-05	4.1553	0.0019042	458.26133246265863	86.024	0.31844	87.571	87.371	87.69	1.547					29	12	3	0	0	0	0.89008	2	36218	36218;36271		2.5775	1.7838	1	80625000	+		25082	14729	12480	12535	28862;28863	28862					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.2645446658134	2	458.261594	914.508634	4.4154	0.0020234	2.2223	0.0010184	6.6377	0.0030418	458.2626259299082	86.374	0.72576	87.921	87.69	88.415	1.547					80	25	4	0	0	0	0.89008	5	36322	36322;36374;36425;36477;36531		2.5775	2.5775	1	52824000	+		25083	14729	12480	12535	28864;28865;28866;28867;28868	28864					0.04796044057036397
PKKGRWSG	8	Unmodified	_PKKGRWSG_					0	0	0			REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	REV__tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	458.261594	914.508634	4.4154	0.0020234	2.2223	0.0010184	6.6377	0.0030418	458.2626259299082	86.374	0.72576	87.921	87.69	88.415	1.547	0.046852	-0.0003722	NaN	2.5775	80	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52824000	+		25084	14729	12480	12535							0.04796044057036397
PKKKKKRNRRK	11	Unmodified	_PKKKKKRNRRK_					0	0	0			REV__ENSG00000087365|ENST00000322535|SF3B2	REV__ENSG00000087365|ENST00000322535|SF3B2	MSMS	GG20161007_CRH_Patient100_W632_02	4	733.9947387576103	2	733.99696	1465.97937	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.319	1	84.957	84.457	85.457	1.6379								0	0	0	0.63775	1	34948	34948		0.30703	0.30703	1		+		25085	8871	12481	12536	28869	28869					0.265016667098962
PKKKYGRSR	9	Unmodified	_PKKKYGRSR_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3434326052666	2	560.340907	1118.66726	4.6478	0.0026044	0.26791	0.00015012	4.9157	0.0027545	560.3408691028393	87.254	0.55872	88.749	88.456	89.015	1.4953					60	17	5	0	0	0	0.85019	1	36802	36802		0.52476	0	1	27629000	+		25086	11890	12482	12537	28870	28870					0.11267337965318802
PKKLELLA	8	Unmodified	_PKKLELLA_					0	0	0			REV__nc|ENSG00000150687|O95084-2|PRSS23	REV__nc|ENSG00000150687|O95084-2|PRSS23	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.8697692751884	3	304.535661	910.585153	0.69099	0.00021043	1.0901	0.00033199	1.7811	0.00054242	304.53596101702476	34.806	0.58175	35.105	34.703	35.285	0.29941					49	29	2	0	0	0	0.89178	1	14608	14608		0.40072	0	1	2398200	+		25087	10385	12483	12538	28871	28871					0.1262842283366581
PKKLELLA	8	Unmodified	_PKKLELLA_					0	0	0			REV__nc|ENSG00000150687|O95084-2|PRSS23	REV__nc|ENSG00000150687|O95084-2|PRSS23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5366088747978	3	304.535661	910.585153	-0.017342	-5.2813E-06	2.3314	0.00070999	2.314	0.00070471	304.5363997906528	26.273	0.78618	28.02	27.583	28.369	1.747					52	25	3	0	0	0	0.89051	1	10986	10986		1.4819	0	1	6940600	+		25088	10385	12483	12538	28872	28872					0.1262842283366581
PKKLVSRLVF	10	Unmodified	_PKKLVSRLVF_					0	0	0			REV__ENSG00000184661|ENST00000330560|CDCA2	REV__ENSG00000184661|ENST00000330560|CDCA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2609435915947	3	396.260531	1185.75976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.157	1	93.094	92.594	93.594	0.93623								0	0	0	0.66218	1	38813	38813		0.77653	0	1		+		25089	11429	12484	12539	28873	28873					0.1743142297882514
PKKMGPIR	8	Unmodified	_PKKMGPIR_					0	0	0		KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant;nc|ENSG00000137261|Q5VV43-4|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;ENSG00000137261|ENST00000378214|KIAA0319	KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	309.5245544314384	3	309.52499	925.553142	0.14312	4.4299E-05	-1.319	-0.00040826	-1.1759	-0.00036396	309.52450942792774	24.668	0.36466	24.91	24.713	25.078	0.24251					34	11	4	0	0	0	0.89187	1	10286	10286		0.40072	0	1	8698500			25090	2763	12485	12540	28874	28874					0.08738731878861472
PKKMGPIR	8	Unmodified	_PKKMGPIR_					0	0	0		KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant;nc|ENSG00000137261|Q5VV43-4|KIAA0319;nc|ENSG00000137261|Q5VV43-3|KIAA0319;nc|ENSG00000137261|Q5VV43-2|KIAA0319;ENSG00000137261|ENST00000378214|KIAA0319	KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	309.5244018435478	3	309.52499	925.553142	0.031403	9.7199E-06	-1.6767	-0.00051898	-1.6453	-0.00050926	309.52438469138167	23.507	0.36617	24.721	24.535	24.901	1.2145					35	11	4	0	0	0	0.89187	1	9838	9838		0.40072	0	1	6137700			25091	2763	12485	12540	28875	28875					0.08738731878861472
PKKMIYLV	8	Unmodified	_PKKMIYLV_					0	0	0			REV__ENST00000366554.2_1_1:241757348-241757720:-|nuORF	REV__ENST00000366554.2_1_1:241757348-241757720:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3054992556572	2	496.304081	990.59361	2.3339	0.0011583	-1.5276	-0.00075816	0.80626	0.00040015	496.3032896432024	78.659	0.33858	78.968	78.769	79.108	0.30932					17	10	3	0	0	0	0.89178	1	32873	32873		0.69038	0	1	917970	+		25092	12609	12486	12541	28876	28876					0.09793653478629949
PKKMLGLTHV	10	Unmodified	_PKKMLGLTHV_					0	0	0		ENST00000453040.5_1_3:404949-405018:+|nuORF	ENST00000453040.5_1_3:404949-405018:+|nuORF	ENST00000453040.5_1_3:404949-405018:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3387328982353	2	562.336444	1122.65834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.805	1	99.878	99.378	100.38	0.072716								0	0	0	0.66166	1	41790	41790		1.6526	0	1				25093	6622	12487	12542	28877	28877					0.10191228284611498
PKKMPPGR	8	Unmodified	_PKKMPPGR_					0	0	0		ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7679931521416	2	455.768197	909.521842	2.26	0.0010301	-1.0114	-0.00046098	1.2486	0.00056907	455.76715724941766	61.883	0.25194	61.883	61.772	62.024	0					11	7	2	0	0	0	0.89051	1	25810	25810		2.3027	0	1	643300			25094	6663	12488	12543	28878	28878					0.06346158844780803
PKKMPPGR	8	Unmodified	_PKKMPPGR_					0	0	0		ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	455.768197	909.521842	2.6753	0.0012193	-4.4757	-0.0020399	-1.8004	-0.00082058	455.76709329211917	61.22	0.21894	61.55	61.391	61.61	0.32974	-0.052837	-0.0011702	NaN	2.3027	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	572450			25095	6663	12488	12543							0.06346158844780803
PKKMPPGR	8	Unmodified	_PKKMPPGR_					0	0	0		ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	ENST00000459961.1_1_1:15653545-15655159:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	455.768197	909.521842	2.6815	0.0012221	-3.7898	-0.0017273	-1.1083	-0.00050514	455.7666264352634	59.956	0.3012	61.375	61.176	61.478	1.4196	-0.22736	-0.00054496	NaN	2.3027	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1016300			25096	6663	12488	12543							0.06346158844780803
PKKPPVVSVK	10	Unmodified	_PKKPPVVSVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2387573122978	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.513	1	90.513	90.013	91.013	0								0	0	0	0.66254	1	37829	37829		0.15932	0	1		+		25097	10496	12489	12544	28879	28879					0.15527758679127146
PKKPPVVSVK	10	Unmodified	_PKKPPVVSVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2381774783134	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.618	1	90.618	90.118	91.118	0								0	0	0	0.66254	1	37875	37875		0.15932	0	1		+		25098	10496	12489	12544	28880	28880					0.15527758679127146
PKKPPVVSVK	10	Unmodified	_PKKPPVVSVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2387573122978	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.27	109.77	110.77	0.15228								0	0	0	0.66254	1	47764	47764		0.15932	0	1		+		25099	10496	12489	12544	28881	28881					0.15527758679127146
PKKRCLLA	8	Unmodified	_PKKRCLLA_					0	0	0		ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	310.1962158083916	3	310.196874	927.568792	-0.38614	-0.00011978	-1.4111	-0.00043772	-1.7972	-0.0005575	310.1964019541839	20.488	0.90535	21.614	21.05	21.955	1.1254					102	29	4	0	0	0	0.89178	1	8513	8513		0.40072	0	1	10571000			25100	5129	12490	12545	28882	28882					0.10211018395909832
PKKRCLLA	8	Unmodified	_PKKRCLLA_					0	0	0		ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	310.196874	927.568792	-0.038834	-1.2046E-05	-1.82	-0.00056455	-1.8588	-0.00057659	310.1962843290938	21.417	1.0288	21.64	21.022	22.051	0.223	0.098894	-3.528E-05	NaN	0.40072	112	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8807100			25101	5129	12490	12545							0.10211018395909832
PKKRCLLA	8	Unmodified	_PKKRCLLA_					0	0	0		ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	310.196874	927.568792	-0.38614	-0.00011978	-1.4111	-0.00043772	-1.7972	-0.0005575	310.1964019541839	20.488	0.90535	21.614	21.05	21.955	1.1254	0.072815	0.00034521	NaN	0.40072	102	29	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10571000			25102	5129	12490	12545							0.10211018395909832
PKKRCLLA	8	Unmodified	_PKKRCLLA_					0	0	0		ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	ENSG00000204272|ENST00000374922|NBDY	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	310.196874	927.568792	-0.27616	-8.5663E-05	-2.0394	-0.00063261	-2.3155	-0.00071827	310.1962060112846	19.845	1.0039	21.369	20.856	21.86	1.5237	-0.17171	-0.00023946	NaN	0.40072	110	32	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11282000			25103	5129	12490	12545							0.10211018395909832
PKKRGLAP	8	Unmodified	_PKKRGLAP_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7812377810478	2	433.782162	865.549771	0.97724	0.00042391	-2.4414	-0.001059	-1.4641	-0.00063511	433.78103734052144	36.759	0.46273	36.759	36.546	37.009	0					52	25	3	0	0	0	0.89051	1	15381	15381		2.3027	0	1	13643000			25104	1358	12491	12546	28883	28883					0.11161805096503485
PKKVIHIR	8	Unmodified	_PKKVIHIR_					0	0	0			REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8344299197197	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.512	1	20.512	20.012	21.012	0								0	0	0	1.0178	1	8527	8527		0.69038	0	1		+		25105	9802	12492	12547	28884	28884					0.15458042430327623
PKKVIHIR	8	Unmodified	_PKKVIHIR_					0	0	0			REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8348571658134	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.95	1	112.95	112.45	113.45	0								0	0	0	1.0178	1	48815	48815		0.69038	0	1		+		25106	9802	12492	12547	28885	28885					0.15458042430327623
PKKVIHIR	8	Unmodified	_PKKVIHIR_					0	0	0			REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8344909548759	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.33	1	118.33	117.83	118.83	0								0	0	0	1.0178	1	50993	50993		0.69038	0	1		+		25107	9802	12492	12547	28886	28886					0.15458042430327623
PKKVIHIR	8	Unmodified	_PKKVIHIR_					0	0	0			REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8340026736259	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.73	1	118.73	118.23	119.23	0								0	0	0	1.0178	1	51151	51151		0.69038	0	1		+		25108	9802	12492	12547	28887	28887					0.15458042430327623
PKKVIHIR	8	Unmodified	_PKKVIHIR_					0	0	0			REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	REV__nc|ENSG00000130803|Q96PQ6-3|ZNF317	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.8343078494072	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.81	1	113.98	113.48	114.48	0.17579								0	0	0	1.0178	1	49330	49330		0.69038	0	1		+		25109	9802	12492	12547	28888	28888					0.15458042430327623
PKKVRRLAIK	10	Unmodified	_PKKVRRLAIK_					0	0	0		tr|A0A553SHA4|A0A553SHA4_NIACILargeribosomalsubunitproteinuL4OS=NialliacirculansOX=1397GN=rplDPE=3SV=1	tr|A0A553SHA4|A0A553SHA4_NIACILargeribosomalsubunitproteinuL4OS=NialliacirculansOX=1397GN=rplDPE=3SV=1	tr|A0A553SHA4|A0A553SHA4_NIACILargeribosomalsubunitproteinuL4OS=NialliacirculansOX=1397GN=rplDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9227172732353	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.408	1	15.408	14.908	15.908	0								0	0	0	0.66176	1	6396	6396		1.4819	0	1				25110	16143	12493	12548	28889	28889					0.22849622855642338
PKLIVRIILI	10	Unmodified	_PKLIVRIILI_					0	0	0		tr|A0A7D7A1H9|A0A7D7A1H9_9CLOTAnkyrinrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15355PE=4SV=1	tr|A0A7D7A1H9|A0A7D7A1H9_9CLOTAnkyrinrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15355PE=4SV=1	tr|A0A7D7A1H9|A0A7D7A1H9_9CLOTAnkyrinrepeatdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15355PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	393.2850219607353	3	393.284677	1176.8322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.853	1	98.853	98.353	99.353	0								0	0	0	0.66264	1	41361	41361		0	0	1				25111	17239	12494	12549	28890	28890					0.25085757052420377
PKLKLTRPV	9	Unmodified	_PKLKLTRPV_					0	0	0		nc|ENSG00000171813|Q6NUJ5-2|PWWP2B;PWWP2B|p.R554Afs*5|1|0.22|ENSG00000171813|chr10:132406159-132406160|-/GCCACGGCGCGTT|frameshift_variant;ENSG00000171813|ENST00000305233|PWWP2B	nc|ENSG00000171813|Q6NUJ5-2|PWWP2B	nc|ENSG00000171813|Q6NUJ5-2|PWWP2B	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2389404177666	3	351.237726	1050.69135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.002	1	96.107	95.607	96.607	0.105								0	0	0	0.42693	1	40180	40180		2.4985	0	1				25112	4210	12495	12550	28891	28891					0.168031783989818
PKLRPGKA	8	Unmodified	_PKLRPGKA_					0	0	0		ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7814514040947	2	433.782162	865.549771	0.97724	0.00042391	-2.4414	-0.001059	-1.4641	-0.00063511	433.78103734052144	36.759	0.46273	36.759	36.546	37.009	0					52	25	3	0	0	0	0.89178	1	15512	15512		0.69038	0	1	13643000			25113	7162	12496	12551	28892	28892					0.11161805096503485
PKLRPGKA	8	Unmodified	_PKLRPGKA_					0	0	0		ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7821227908134	2	433.782162	865.549771	1.0972	0.00047595	-0.74207	-0.0003219	0.35514	0.00015405	433.7818644889677	39.66	2.1918	39.66	38.953	41.145	0					173	69	3	0	0	0	0.89008	4	16415	16415;16455;16505;16584		2.5775	0	1	12945000			25114	7162	12496	12551	28893;28894;28895;28896	28893					0.11161805096503485
PKLRPGKA	8	Unmodified	_PKLRPGKA_					0	0	0		ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	433.7812988162041	2	433.782162	865.549771	0.88926	0.00038574	-3.2139	-0.0013941	-2.3246	-0.0010084	433.7807222797613	33.551	0.19683	35.374	35.202	35.399	1.8227					25	16	3	0	0	0	2.3239	1	14018	14018		2.5775	0	1	115760000			25115	7162	12496	12551	28897	28897					0.11161805096503485
PKLRPGKA	8	Unmodified	_PKLRPGKA_					0	0	0		ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	ENST00000530189.1_1_11:7618841-7631707:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	433.782162	865.549771	2.0282	0.00087981	-0.55172	-0.00023933	1.4765	0.00064049	433.7818241493751	39.251	0.59131	39.56	39.455	40.046	0.30857	-0.050002	0.00014314	NaN	2.5775	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	656090			25116	7162	12496	12551							0.11161805096503485
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	823.5410034060478	1	823.54	822.532724	2.7689	0.0022803	-0.88223	-0.00072655	1.8867	0.0015538	823.5390269388594	107.85	0.27182	107.9	107.75	108.02	0.052452					47	14	5	0	0	0	0.89176	1	46258	46258		0.79363	0	1	1487199999.9999998			25117	17231	12497	12552	28898	28898					0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	823.5425903201103	1	823.54	822.532724	2.8368	0.0023362	-1.3581	-0.0011185	1.4786	0.0012177	823.5387948894772	107.81	0.28098	107.96	107.83	108.11	0.15781					64	17	6	0	0	0	0.89176	1	46414	46414		0.79363	0	1	10939000000			25118	17231	12497	12552	28899	28899					0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	823.5392944216728	1	823.54	822.532724	2.8351	0.0023348	-1.1262	-0.00092745	1.7089	0.0014074	823.5384432806069	108.24	0.52005	108.39	108.29	108.81	0.15781					51	29	2	0	0	0	0.89176	1	46690	46690		0.79363	0	1	71016000			25119	17231	12497	12552	28900	28900					0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	823.5415527224541	1	823.54	822.532724	2.973	0.0024484	-1.8115	-0.0014918	1.1615	0.00095651	823.5384294527175	107.79	0.28899	107.95	107.79	108.08	0.15795					55	15	5	0	0	0	0.89176	2	46346	46346;46419		0.79363	0	1	7862699999.999999			25120	17231	12497	12552	28901;28902	28901					0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	823.54	822.532724	1.2484	0.0010281	0.39171	0.00032259	1.6401	0.0013507	823.5401234679651	107.87	0.25245	107.87	107.74	107.99	0	-0.051496	0.0011889	NaN	0.79363	34	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1569299999.9999998			25121	17231	12497	12552							0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	823.54	822.532724	1.2484	0.0010281	0.37575	0.00030944	1.6242	0.0013376	823.5410473169495	108.39	0.13519	108.39	108.28	108.42	0	-0.0060417	0.00095421	NaN	0.79363	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3775900			25122	17231	12497	12552							0.1143588449069739
PKPAKAVI	8	Unmodified	_PKPAKAVI_					0	0	0		tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	tr|A0A7D7A152|A0A7D7A152_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06195PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	823.54	822.532724	2.9705	0.0024463	-1.0549	-0.00086872	1.9156	0.0015776	823.5394238266003	108.24	0.25367	108.4	108.35	108.6	0.15796	0.0044481	-0.00022395	NaN	0.79363	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10714000			25123	17231	12497	12552							0.1143588449069739
PKPPLSLSLP	10	Unmodified	_PKPPLSLSLP_					0	0	0			REV__ENST00000382214.7_1_20:388826-389303:+|nuORF	REV__ENST00000382214.7_1_20:388826-389303:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.0829345583916	3	350.21822	1047.63283	2.0357	0.00071295	2.743	0.00096066	4.7788	0.0016736	350.2188897251339	83.791	0.39569	84.061	83.77	84.165	0.27029					17	12	2	0	0	0	0.1256	1	34988	34988		0.13989	0	1	1126100	+		25124	12782	12498	12553	28903	28903					0.11092077033868009
PKPPLSLSLP	10	Unmodified	_PKPPLSLSLP_					0	0	0			REV__ENST00000382214.7_1_20:388826-389303:+|nuORF	REV__ENST00000382214.7_1_20:388826-389303:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	350.21822	1047.63283	2.2675	0.00079412	2.793	0.00097816	5.0605	0.0017723	350.2189949824742	82.672	0.15266	84.342	84.294	84.447	1.67	0.14016	3.6658E-05	NaN	0.13989	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	511270	+		25125	12782	12498	12553							0.11092077033868009
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2942382693291	3	517.291887	1548.85383	2.0185	0.0010441	1.7	0.00087938	3.7184	0.0019235	517.2928532499682	42.65	1.3609	42.65	42.29	43.651	0					118	43	6	0	0	0	1.0365	2	17761	17761;17928		1.2148	0	1	154400000			25126	5717	12499	12554	28904;28905	28904					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	775.4385864138603	2	775.434193	1548.85383	1.8757	0.0014544	1.454	0.0011275	3.3297	0.002582	775.4352857208955	42.65	0.34158	42.65	42.447	42.789	0					27	10	3	0	0	0	1.0391	1	17805	17805		1.1933	0	1	3560400			25127	5717	12499	12554	28906	28906					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2943603396416	3	517.291887	1548.85383	2.0636	0.0010675	0.71613	0.00037045	2.7797	0.0014379	517.2915899410583	43.161	3.6025	43.161	42.88	46.482	0					255	114	3	0	0	0	1.0365	1	18426	18426		1.2148	0	1	9258100			25128	5717	12499	12554	28907	28907					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2939941287041	3	517.291887	1548.85383	1.941	0.001004	1.5964	0.00082581	3.5374	0.0018299	517.2930043711724	42.177	0.7164	42.497	42.072	42.788	0.32058					116	23	6	0	0	0	1.0365	2	17597	17597;17729		1.2148	0	1	310600000			25129	5717	12499	12554	28908;28909	28908					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6281616091728	3	517.291887	1548.85383	1.9397	0.0010034	1.3262	0.00068603	3.2659	0.0016894	517.292279860137	42.867	4.0798	43.187	42.758	46.838	0.32058					373	135	5	0	0	0	1.0254	9	18264	17849;17899;18185;18224;18264;18813;18866;19046;19424		2.2527	0.16876	1	20394000			25130	5717	12499	12554	28910;28911;28912;28913;28914;28915;28916;28917;28918	28914					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6261474490166	3	517.291887	1548.85383	2.2535	0.0011657	-2.3772	-0.0012297	-0.12369	-6.3984E-05	517.624581144673	54.985	2.4879	55.306	54.837	57.324	0.32088					173	90	3	0	0	0	1.0365	2	23194	23194;23258		1.2148	0	1	5621700			25131	5717	12499	12554	28919;28920	28919					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6262084841728	3	517.291887	1548.85383	2.5539	0.0013211	-2.9106	-0.0015056	-0.35672	-0.00018453	517.6243596818683	57.947	1.949	58.27	57.327	59.276	0.32298					160	67	3	0	0	0	1.0191	2	24537	24086;24537		2.6312	1.4164	1	2190200			25132	5717	12499	12554	28921;28922	28922					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6265746951103	3	517.291887	1548.85383	2.2209	0.0011489	-1.2276	-0.00063501	0.99337	0.00051386	517.6252602505027	60.659	4.0727	60.987	59.651	63.724	0.32809					285	130	3	0	0	0	1.0191	2	26544	25520;26544		2.6312	0.70888	1	2891500			25133	5717	12499	12554	28923;28924	28924					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6262695193291	3	517.291887	1548.85383	2.0401	0.0010553	-0.45327	-0.00023447	1.5868	0.00082086	517.2924265066421	66.026	4.8757	66.351	65.224	70.1	0.32449					299	155	3	0	0	0	1.0191	2	27756	27756;27805		2.6312	1.4164	1	3928600			25134	5717	12499	12554	28925;28926	28925					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6259643435478	3	517.291887	1548.85383	1.5016	0.00077675	-2.1024	-0.0010875	-0.60082	-0.0003108	517.6251367312109	70.283	3.0522	70.605	68.153	71.206	0.32224					184	97	4	0	0	0	1.0365	1	28526	28526		1.2148	0.20126	1	2263500			25135	5717	12499	12554	28927	28927					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6255981326103	3	517.291887	1548.85383	2.4922	0.0012892	0.40905	0.0002116	2.9012	0.0015008	517.2931513510154	72.908	2.7248	73.233	72.797	75.522	0.32494					133	86	2	0	0	0	1.0391	1	30870	30870		0.40827	0	1	3363200			25136	5717	12499	12554	28928	28928					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6249267458916	3	517.291887	1548.85383	2.4392	0.0012618	-1.3871	-0.00071751	1.0522	0.00054428	517.6243727001174	76.144	1.7131	76.466	75.519	77.232	0.32163					80	54	2	0	0	0	1.0365	1	31878	31878		1.2148	0.76031	1	2191500			25137	5717	12499	12554	28929	28929					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6262695193291	3	517.291887	1548.85383	2.175	0.0011251	-1.4632	-0.00075692	0.71172	0.00036817	517.6250017664112	77.403	1.3225	77.72	77.04	78.362	0.31653					54	41	2	0	0	0	1.0365	1	32426	32426		1.2148	0.20126	1	2585000			25138	5717	12499	12554	28930	28930					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6270019412041	3	517.291887	1548.85383	2.4916	0.0012889	-1.4132	-0.00073102	1.0784	0.00055786	517.625267319906	82.623	3.8174	82.903	81.875	85.692	0.2802					287	122	4	0	0	0	1.0365	1	34386	34386		1.2148	0.80657	1	3009500			25139	5717	12499	12554	28931	28931					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6256591677666	3	517.291887	1548.85383	2.7581	0.0014267	-0.56525	-0.0002924	2.1929	0.0011343	517.6256210221201	87.355	1.6853	87.599	87.339	89.024	0.24387					134	54	4	0	0	0	1.0365	1	37048	37048		1.2148	0.80657	1	1788600			25140	5717	12499	12554	28932	28932					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6254760622978	3	517.291887	1548.85383	2.9093	0.001505	1.4525	0.00075137	4.3619	0.0022564	517.2927606315894	113.01	8.6059	113.05	111.44	120.05	0.044197					426	267	2	0	0	0	1.0191	15	50593	48460;49317;49697;50096;50174;50412;50476;50593;50710;50995;51137;51192;51289;51345;51462		2.6312	0.80657	1	29803000			25141	5717	12499	12554	28933;28934;28935;28936;28937;28938;28939;28940;28941;28942;28943;28944;28945;28946;28947	28940					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2936279177666	3	517.291887	1548.85383	2.531	0.0013093	0.84226	0.00043569	3.3733	0.001745	517.292669744946	40.128	0.89051	41.438	41.117	42.008	1.3102					102	28	6	0	0	0	1.0365	3	16759	16759;16807;16885		1.2148	0	1	298900000			25142	5717	12499	12554	28948;28949;28950	28948					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2941161990166	3	517.291887	1548.85383	2.2757	0.0011772	0.29389	0.00015203	2.5696	0.0013292	517.291798434614	41.681	4.8489	43.007	41.771	46.62	1.3254					319	154	4	0	0	0	1.0191	3	17715	17715;18403;18549		2.6312	0	1	12100000			25143	5717	12499	12554	28951;28952;28953	28951					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2922851443291	3	517.291887	1548.85383	2.4658	0.0012755	-1.9409	-0.001004	0.52495	0.00027155	517.2930720366364	50.53	1.1778	51.924	51.169	52.346	1.3938					80	37	3	0	0	0	1.0191	1	21160	21160		2.6312	0	1	3806500			25144	5717	12499	12554	28954	28954					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6267578005791	3	517.291887	1548.85383	3.3618	0.001739	-1.1584	-0.00059922	2.2034	0.0011398	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0365	2	50682	49088;50682		1.2148	0.31342	1	11283000			25145	5717	12499	12554	28955;28956	28956					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2934448122978	3	517.291887	1548.85383	1.9035	0.00098469	0.99464	0.00051452	2.8982	0.0014992	517.2926794022103	39.706	0.92395	41.568	41.247	42.171	1.8624					108	29	6	0	0	0	1.0365	2	16702	16562;16702		1.2148	0	1	220690000			25146	5717	12499	12554	28957;28958	28958					0.10135954853694784
PKPRRWRRPWD	11	Unmodified	_PKPRRWRRPWD_					0	0	0		ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2939941287041	3	517.291887	1548.85383	2.0814	0.0010767	-0.28795	-0.00014895	1.7935	0.00092776	517.2913100871673	41.243	4.5859	43.135	41.986	46.572	1.8927					387	147	4	0	0	0	0.9945	3	17260	17260;17441;17534		4.1166	1.6818	1	11438000			25147	5717	12499	12554	28959;28960;28961	28959					0.10135954853694784
PKPVRRRL	8	Unmodified	_PKPVRRRL_					0	0	0		nc|ENSG00000135597|Q96D71-2|REPS1;nc|ENSG00000135597|Q96D71-4|REPS1;nc|ENSG00000135597|Q96D71-3|REPS1;ENSG00000135597|ENST00000450536|REPS1	nc|ENSG00000135597|Q96D71-2|REPS1	nc|ENSG00000135597|Q96D71-2|REPS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.2321349978447	3	341.229565	1020.66687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.75	1	104.92	104.42	105.42	0.1731								0	0	0	1.0178	1	44397	44397		0.40072	0	1				25148	2676	12500	12555	28962	28962					0.15735963036127032
PKRAVLRTP	9	Unmodified	_PKRAVLRTP_					0	0	0		ENST00000368408.3_1_1:155059141-155059444:+|nuORF	ENST00000368408.3_1_1:155059141-155059444:+|nuORF	ENST00000368408.3_1_1:155059141-155059444:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5595886111259	3	346.557459	1036.65055	1.4042	0.00048663	3.5138	0.0012177	4.918	0.0017044	346.5582543349455	67.054	0.55699	67.377	67.126	67.683	0.32269					34	18	2	0	0	0	0.82114	1	28162	28162		2.4985	1.3051	1	3333000			25149	6085	12501	12556	28963	28963					0.13368837079360674
PKREKRPRLPR	11	Unmodified	_PKREKRPRLPR_					0	0	0		ENST00000569957.5_1_16:30012641-30012857:+|nuORF;ENST00000562441.5_1_16:30012641-30015954:+|nuORF;ENSG00000169592|ENST00000563197|INO80E	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	358.9808227419853	4	358.979747	1431.88988	2.0806	0.00074689	-2.193	-0.00078725	-0.11244	-4.0364E-05	359.22948612074754	59.623	0.64368	59.949	59.649	60.292	0.32553					35	20	2	0	0	0	1.0391	1	24993	24993		0.40827	0	1	1576200			25150	4098	12502	12557	28964	28964					0.1912141203054034
PKREKRPRLPR	11	Unmodified	_PKREKRPRLPR_					0	0	0		ENST00000569957.5_1_16:30012641-30012857:+|nuORF;ENST00000562441.5_1_16:30012641-30015954:+|nuORF;ENSG00000169592|ENST00000563197|INO80E	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	ENST00000569957.5_1_16:30012641-30012857:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	358.979747	1431.88988	0.32743	0.00011754	-2.3333	-0.00083762	-2.0059	-0.00072008	359.2299370297374	57.936	0.17912	59.905	59.814	59.993	1.969	-0.021969	-0.00013174	NaN	0.40827	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907580			25151	4098	12502	12557							0.1912141203054034
PKRGKRKKLPK	11	Unmodified	_PKRGKRKKLPK_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.4812194705009	4	334.731941	1334.89866	2.2008	0.00073666	-1.4982	-0.00050148	0.7026	0.00023518	334.7315391019746	112.81	0.19804	112.85	112.8	113	0.044189					7	5	2	0	0	0	0.14606	1	48611	48611		0.40827	0.32491	1	1029700	+		25152	9474	12503	12558	28965	28965					0.24460385666998263
PKRGWLLG	8	Unmodified	_PKRGWLLG_					0	0	0		ENST00000268035.10_1_15:99504263-99504416:+|nuORF	ENST00000268035.10_1_15:99504263-99504416:+|nuORF	ENST00000268035.10_1_15:99504263-99504416:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5243408083916	3	309.523867	925.549771	-0.24541	-7.596E-05	1.4323	0.00044332	1.1869	0.00036736	309.5242178955548	20.501	0.58648	22.076	21.822	22.409	1.5748					56	19	4	0	0	0	0.89185	1	8532	8532		0.45834	0	1	8049000			25153	5664	12504	12559	28966	28966					0.0840180509652555
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6287109255791	3	517.291887	1548.85383	2.0636	0.0010675	0.71613	0.00037045	2.7797	0.0014379	517.2915899410583	43.161	3.6025	43.161	42.88	46.482	0					255	114	3	0	0	0	1.0191	1	18934	18934		2.6312	0.70373	1	9258100	+		25154	12275	12505	12560	28967	28967					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6247436404228	3	517.291887	1548.85383	2.1303	0.001102	-3.4334	-0.001776	-1.303	-0.00067404	517.2909652950812	55.12	0.21086	55.12	55.009	55.22	0					16	13	2	0	0	0	0.99899	1	22992	22992		3.8459	1.2147	1	2130400	+		25155	12275	12505	12560	28968	28968					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6254150271416	3	517.291887	1548.85383	1.4607	0.00075563	-1.3805	-0.0007141	0.080273	4.1524E-05	517.6252793759891	113.5	7.1668	113.5	112.85	120.01	0					631	222	3	0	0	0	1.0391	2	51270	51270;51349		0.40827	0.27183	1	6251800	+		25156	12275	12505	12560	28969;28970	28969					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	516.7947875857353	3	517.291887	1548.85383	2.8025	0.0014497	-1.2146	-0.00062831	1.5879	0.00082139	517.2925644405406	86.27	2.4452	86.27	84.275	86.72	0					198	78	3	0	0	0	0.14606	1	35156	35156		0.45452	0.35968	1	1673800	+		25157	12275	12505	12560	28971	28971					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2938110232353	3	517.291887	1548.85383	1.9397	0.0010034	1.3262	0.00068603	3.2659	0.0016894	517.292279860137	42.867	4.0798	43.187	42.758	46.838	0.32058					373	135	5	0	0	0	1.0191	2	17937	17937;17985		2.6312	1.4164	1	20394000	+		25158	12275	12505	12560	28972;28973	28972					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6261474490166	3	517.291887	1548.85383	1.9497	0.0010086	-3.1438	-0.0016263	-1.1941	-0.0006177	517.6244107857391	52.166	3.1461	52.491	51.695	54.841	0.32554					243	102	4	0	0	0	0.95935	6	21810	21810;22155;22202;22248;22296;22607		6.2344	1.9395	1	3586500	+		25159	12275	12505	12560	28974;28975;28976;28977;28978;28979	28974					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6254150271416	3	517.291887	1548.85383	2.2535	0.0011657	-2.3772	-0.0012297	-0.12369	-6.3984E-05	517.624581144673	54.985	2.4879	55.306	54.837	57.324	0.32088					173	90	3	0	0	0	0.9945	2	23851	23044;23851		4.1166	2.9018	1	5621700	+		25160	12275	12505	12560	28980;28981	28981					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6253539919853	3	517.291887	1548.85383	2.2209	0.0011489	-1.2276	-0.00063501	0.99337	0.00051386	517.6252602505027	60.659	4.0727	60.987	59.651	63.724	0.32809					285	130	3	0	0	0	1.0032	3	25366	25366;25971;26316		3.5927	1.0379	1	2891500	+		25161	12275	12505	12560	28982;28983;28984	28982					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6262695193291	3	517.291887	1548.85383	2.0401	0.0010553	-0.45327	-0.00023447	1.5868	0.00082086	517.2924265066421	66.026	4.8757	66.351	65.224	70.1	0.32449					299	155	3	0	0	0	1.0365	3	27315	27315;27608;28294		1.2148	0.70149	1	3928600	+		25162	12275	12505	12560	28985;28986;28987	28985					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6263915896416	3	517.291887	1548.85383	1.5016	0.00077675	-2.1024	-0.0010875	-0.60082	-0.0003108	517.6251367312109	70.283	3.0522	70.605	68.153	71.206	0.32224					184	97	4	0	0	0	1.0254	3	29167	29167;29320;29658		2.2527	1.0379	1	2263500	+		25163	12275	12505	12560	28988;28989;28990	28988					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2938110232353	3	517.291887	1548.85383	2.4922	0.0012892	0.40905	0.0002116	2.9012	0.0015008	517.2931513510154	72.908	2.7248	73.233	72.797	75.522	0.32494					133	86	2	0	0	0	1.0369	2	30440	30440;30608		1.1098	0.6038	1	3363200	+		25164	12275	12505	12560	28991;28992	28991					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6265136599541	3	517.291887	1548.85383	2.175	0.0011251	-1.4632	-0.00075692	0.71172	0.00036817	517.6250017664112	77.403	1.3225	77.72	77.04	78.362	0.31653					54	41	2	0	0	0	1.0282	1	32558	32558		2.084	0.62885	1	2585000	+		25165	12275	12505	12560	28993	28993					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2942993044853	3	517.291887	1548.85383	1.9659	0.001017	-1.1762	-0.00060844	0.78974	0.00040853	517.625098036245	79.259	3.2574	79.559	78.029	81.286	0.30046					209	103	3	0	0	0	1.0282	3	33300	33300;33375;33425		2.084	1.6295	1	2480200	+		25166	12275	12505	12560	28994;28995;28996	28994					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6271850466728	3	517.291887	1548.85383	2.4916	0.0012889	-1.4132	-0.00073102	1.0784	0.00055786	517.625267319906	82.623	3.8174	82.903	81.875	85.692	0.2802					287	122	4	0	0	0	0.99899	2	34906	34702;34906		3.8459	2.6311	1	3009500	+		25167	12275	12505	12560	28997;28998	28998					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6268188357353	3	517.291887	1548.85383	2.7581	0.0014267	-0.56525	-0.0002924	2.1929	0.0011343	517.6256210221201	87.355	1.6853	87.599	87.339	89.024	0.24387					134	54	4	0	0	0	1.0254	3	36913	36647;36861;36913		2.2527	1.0379	1	1788600	+		25168	12275	12505	12560	28999;29000;29001	29001					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6258422732353	3	517.291887	1548.85383	2.9093	0.001505	1.4525	0.00075137	4.3619	0.0022564	517.2927606315894	113.01	8.6059	113.05	111.44	120.05	0.044197					426	267	2	0	0	0	1.0254	9	51395	49366;49420;49749;49864;50018;50255;51044;51240;51395		2.2527	1.0379	1	29803000	+		25169	12275	12505	12560	29002;29003;29004;29005;29006;29007;29008;29009;29010	29010					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6265136599541	3	517.291887	1548.85383	1.9659	0.001017	-1.1762	-0.00060844	0.78974	0.00040853	517.625098036245	79.259	3.2574	79.559	78.029	81.286	0.30046					209	103	3	0	0	0	0.14606	1	32558	32558		2.084	0.62885	1	2480200	+		25170	12275	12505	12560	29011	29011					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.2938110232353	3	517.291887	1548.85383	1.9286	0.00099763	-1.1188	-0.00057873	0.80978	0.00041889	517.958567330778	72.566	2.93	72.891	71.175	74.105	0.32494					179	92	3	0	0	0	0.14606	1	30440	30440		1.1098	0.6038	1	4625800	+		25171	12275	12505	12560	29012	29012					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6265136599541	3	517.291887	1548.85383	1.1848	0.00061288	-1.8359	-0.00094972	-0.65117	-0.00033685	517.2920179057138	52.469	1.7175	53.866	53.012	54.729	1.3966					114	57	3	0	0	0	1.0365	1	21874	21874		1.2148	0	1	3126000	+		25172	12275	12505	12560	29013	29013					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6276733279228	3	517.291887	1548.85383	5.7875	0.0029938	-0.59241	-0.00030645	5.1951	0.0026874	517.2924075471464	89.078	1.5639	90.125	89.295	90.859	1.0475					86	48	2	0	0	0	1.0372	1	37423	37423		1.0136	0.55906	1	1477500	+		25173	12275	12505	12560	29014	29014					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6246826052666	3	517.291887	1548.85383	3.3618	0.001739	-1.1584	-0.00059922	2.2034	0.0011398	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0282	9	51565	49163;50280;50423;50504;50878;50939;51076;51388;51565		2.084	0.86914	1	11283000	+		25174	12275	12505	12560	29015;29016;29017;29018;29019;29020;29021;29022;29023	29023					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.8140136599541	3	517.291887	1548.85383	4.3602	0.0022555	-1.8831	-0.00097413	2.4771	0.0012814	517.9584381983801	91.743	1.7367	92.679	91.671	93.408	0.93623					104	54	3	0	0	0	0.14606	1	38385	38385		2.084	0.62885	1	1837300	+		25175	12275	12505	12560	29024	29024					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2927734255791	3	517.291887	1548.85383	2.0814	0.0010767	-0.28795	-0.00014895	1.7935	0.00092776	517.2913100871673	41.243	4.5859	43.135	41.986	46.572	1.8927					387	147	4	0	0	0	1.0224	2	17103	17103;17743		2.4348	1.1051	1	11438000	+		25176	12275	12505	12560	29025;29026	29025					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2940551638603	3	517.291887	1548.85383	4.8375	0.0025024	-0.51304	-0.00026539	4.3245	0.002237	517.6252313436355	88.21	1.4686	89.657	89.061	90.53	1.4467					95	45	4	0	0	0	1.0254	1	37277	37277		2.2527	0	1	980380	+		25177	12275	12505	12560	29027	29027					0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	517.291887	1548.85383	2.1303	0.001102	-3.4334	-0.001776	-1.303	-0.00067404	517.2909652950812	55.12	0.21086	55.12	55.009	55.22	0	-0.093241	-0.0011908	NaN	4.1166	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2130400	+		25178	12275	12505	12560							0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	517.291887	1548.85383	2.2152	0.0011459	-2.389	-0.0012358	-0.17377	-8.989E-05	517.6247204104226	92.725	0.54562	92.725	92.53	93.076	0	0.028058	-0.0010222	NaN	2.084	35	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1517000	+		25179	12275	12505	12560							0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	517.291887	1548.85383	2.7336	0.0014141	-2.5661	-0.0013274	0.16754	8.6668E-05	517.624381114783	85.848	1.179	86.1	85.601	86.78	0.25227	-0.14729	-0.0015802	NaN	0.45452	106	38	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1834500	+		25180	12275	12505	12560							0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	517.291887	1548.85383	2.7599	0.0014277	1.1454	0.0005925	3.9053	0.0020202	517.2945478139422	84.776	0.56905	86.372	85.945	86.514	1.5962	0.12468	0.0041796	NaN	0.45452	41	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1140800	+		25181	12275	12505	12560							0.10135954853672047
PKRPDWPRRWR	11	Unmodified	_PKRPDWPRRWR_					0	0	0			REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	REV__ENST00000287878.8_2_7:151292537-151372615:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	517.291887	1548.85383	2.5088	0.0012978	1.2523	0.00064782	3.7611	0.0019456	517.2924674515207	80.958	0.74277	82.654	82.241	82.983	1.6959	-0.12443	0.002972	NaN	3.8459	31	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1477900	+		25182	12275	12505	12560							0.10135954853672047
PKRPKVLQ	8	Unmodified	_PKRPKVLQ_					0	0	0		ENSG00000178234|ENST00000430044|GALNT11;ENST00000491061.1_1_7:151805139-151814490:+|nuORF	ENSG00000178234|ENST00000430044|GALNT11	ENSG00000178234|ENST00000430044|GALNT11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	322.7140380740166	3	322.546671	964.618185	0.20039	6.4636E-05	0.28383	9.1547E-05	0.48422	0.00015618	322.5467717878624	32.947	0.29142	34.772	34.579	34.87	1.8246					37	22	2	0	0	0	0.88846	1	13847	13847		3.5965	1.9439	1	64362000			25183	4480	12506	12561	29028	29028					0.13446049676360872
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	387.9910461306572	4	387.991918	1547.93856	-0.21161	-8.2104E-05	-1.2659	-0.00049114	-1.4775	-0.00057325	387.991382208045	39.596	0.71149	39.596	39.235	39.947	0					87	22	5	0	0	0	1.0391	1	16545	16545		0.40827	0.31342	1	14055000			25184	5728	12507	12562	29029	29029					0.18651325390305828
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.2420532107353	4	387.991918	1547.93856	-0.1905	-7.3911E-05	-0.85994	-0.00033365	-1.0504	-0.00040756	387.9916705865915	40.115	1.0396	40.115	39.852	40.891	0					99	32	5	0	0	0	1.0391	3	16740	16740;16827;16866		0.40827	0.31342	1	12742000			25185	5728	12507	12562	29030;29031;29032	29030					0.18651325390305828
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.4928161501884	4	387.991918	1547.93856	-0.24158	-9.3731E-05	-3.2269	-0.001252	-3.4685	-0.0013457	387.99080029063776	37.11	0.33751	38.394	38.254	38.591	1.284					64	29	3	0	0	0	1.0402	1	15660	15660		0.08335	0.010087	1	10964000			25186	5728	12507	12562	29033	29033					0.18651325390305828
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2409240603447	4	387.991918	1547.93856	0.038482	1.4931E-05	-2.9718	-0.001153	-2.9333	-0.0011381	388.2411157222334	37.439	0.3767	38.723	38.579	38.956	1.284					53	22	3	0	0	0	1.0402	2	15711	15711;15753		0.08335	0.010087	1	5170200			25187	5728	12507	12562	29034;29035	29034					0.18651325390305828
PKRRRWRQPRI	11	Unmodified	_PKRRRWRQPRI_					0	0	0		ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	ENST00000293604.10_1_6:30620706-30620838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	4	387.991918	1547.93856	1.0043	0.00038965	-2.4783	-0.00096157	-1.4741	-0.00057193	387.99103157081345	43.22	0.79564	44.574	44.059	44.855	1.3536					51	25	3	0	0	0	0.14606	1	17902	17902		0	0	1	1038600			25188	5728	12507	12562	29036	29036					0.18651325390305828
PKSLRSVRRRE	11	Unmodified	_PKSLRSVRRRE_					0	0	0		ENST00000175091.4_1_2:20251387-20251465:-|nuORF	ENST00000175091.4_1_2:20251387-20251465:-|nuORF	ENST00000175091.4_1_2:20251387-20251465:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1473266482353	3	461.947898	1382.82186	3.3781	0.0015605	0.48498	0.00022404	3.863	0.0017845	461.94799124263005	97.227	0.1898	97.318	97.21	97.399	0.090881					17	5	4	0	0	0	0.14606	1	40715	40715		0.40827	0.24894	1	28055000			25189	5504	12508	12563	29037	29037					0.14576542379882085
PKSLWKSVF	9	Unmodified	_PKSLWKSVF_					0	0	0		MICAL3|p.E1822Afs*25|1|0.05|ENSG00000243156|chr22:17810794-17810795|-/G|frameshift_variant;ENSG00000243156|ENST00000441493|MICAL3	MICAL3|p.E1822Afs*25|1|0.05|ENSG00000243156|chr22:17810794-17810795|-/G|frameshift_variant	MICAL3|p.E1822Afs*25|1|0.05|ENSG00000243156|chr22:17810794-17810795|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.8210327029228	2	546.316035	1090.61752	2.8573	0.001561	-1.0218	-0.00055822	1.8355	0.0010028	546.3176687537007	65.243	0.25034	66.642	66.443	66.694	1.3989					13	7	3	0	0	0	0.1082	1	27363	27363		13.042	0	1	2327700			25190	5351	12509	12564	29038	29038					0.07583210236657578
PKTGPLAA	8	Unmodified	_PKTGPLAA_					0	0	0			REV__ENST00000380094.9_1_10:5931461-5931704:-|nuORF	REV__ENST00000380094.9_1_10:5931461-5931704:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7258483767509	2	377.726521	753.438489	1.8119	0.00068441	-2.9932	-0.0011306	-1.1813	-0.0004462	377.7251381737335	65.14	0.5122	65.467	65.162	65.674	0.32689					42	15	4	0	0	0	0.88587	1	27255	27255		5.2307	0	1	12239000	+		25191	12753	12510	12565	29039	29039					0.05190745668551244
PKTGPLAA	8	Unmodified	_PKTGPLAA_					0	0	0			REV__ENST00000380094.9_1_10:5931461-5931704:-|nuORF	REV__ENST00000380094.9_1_10:5931461-5931704:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	377.726521	753.438489	2.6453	0.00099919	-3.8211	-0.0014433	-1.1758	-0.00044413	377.7247755892828	63.812	0.5242	65.74	65.457	65.981	1.928	0.23217	-0.00075595	NaN	5.2307	41	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7472800	+		25192	12753	12510	12565							0.05190745668551244
PKTHLELKK	9	Unmodified	_PKTHLELKK_					0	0	0		nc|ENSG00000204472|P55008-2|AIF1;nc|ENSG00000204472|P55008-3|AIF1;ENSG00000204472|ENST00000376059|AIF1	nc|ENSG00000204472|P55008-2|AIF1	nc|ENSG00000204472|P55008-2|AIF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3397704958916	2	547.340041	1092.66553	2.673	0.001463	-2.0781	-0.0011374	0.59489	0.0003256	547.3385812649504	94.042	0.5383	94.187	93.91	94.448	0.14493					30	16	3	0	0	0	0.83753	1	39340	39340		1.8442	0	1	1085700			25193	5144	12511	12566	29040	29040					0.12290284156688358
PKTIPWLSL	9	Unmodified	_PKTIPWLSL_					0	0	0			REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	527.4034301638603	2	527.81841	1053.62227	1.338	0.00070621	1.8818	0.00099323	3.2197	0.0016994	527.8200738945892	107.66	0.11761	107.66	107.58	107.7	0					9	5	2	0	0	0	0.11867	1	46220	46220		3.5965	1.019	1	5769200	+		25194	12865	12512	12567	29041	29041					0.09760094379430484
PKTIPWLSL	9	Unmodified	_PKTIPWLSL_					0	0	0			REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	527.81841	1053.62227	3.1619	0.0016689	-1.3028	-0.00068766	1.8591	0.00098126	527.8178445194071	107.6	0.12837	107.76	107.68	107.81	0.15781	0.037361	-0.0010729	NaN	3.5965	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11240000	+		25195	12865	12512	12567							0.09760094379430484
PKTIPWLSL	9	Unmodified	_PKTIPWLSL_					0	0	0			REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	REV__ENST00000397572.4_3_1:39338695-39338991:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	527.81841	1053.62227	3.3554	0.001771	-2.4384	-0.001287	0.91704	0.00048403	527.8170209232885	107.58	0.11194	107.74	107.66	107.77	0.15795	0.022847	-0.0022716	NaN	3.5965	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11153000	+		25196	12865	12512	12567							0.09760094379430484
PKTKKNRK	8	Unmodified	_PKTKKNRK_					0	0	0			REV__ENST00000563480.6_2_15:66782707-66786755:-|nuORF	REV__ENST00000563480.6_2_15:66782707-66786755:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3270446658134	2	500.324725	998.634898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.01	1	106.17	105.67	106.67	0.16174								0	0	0	1.0178	1	45229	45229		2.3027	0	1		+		25197	13914	12513	12568	29042	29042					0.1355255056231499
PKTKKREEIL	10	Unmodified	_PKTKKREEIL_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF;nc|ENSG00000148584|Q9NQ94-6|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3839599490166	2	621.382437	1240.75032	2.8287	0.0017577	1.1256	0.00069945	3.9543	0.0024571	621.3823570766725	105.92	0.099586	106.08	106.01	106.11	0.16679					11	4	3	0	0	0	0.88579	1	45169	45169		2.9952	0	1	26290000			25198	0	12514	12569	29043	29043					0.13957609902649892
PKTKKREEIL	10	Unmodified	_PKTKKREEIL_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF;nc|ENSG00000148584|Q9NQ94-6|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	621.382437	1240.75032	2.8561	0.0017747	2.0197	0.001255	4.8758	0.0030297	621.3822189633265	105.92	0.12118	106.08	106.02	106.14	0.15859	-0.0024233	0.00084021	NaN	2.9952	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13725000			25199	0	12514	12569							0.13957609902649892
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2473327517509	3	394.246005	1179.71618	2.6741	0.0010543	0.81715	0.00032216	3.4913	0.0013764	394.2462107237669	90.331	1.7877	90.541	90.017	91.805	0.20904					105	55	5	0	0	0	0.8974	2	37865	37826;37865		1.7423	0.67081	1	33446000			25200	7064	12515	12570	29044;29045	29045					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8676025271416	2	590.865369	1179.71618	2.5245	0.0014916	1.8923	0.0011181	4.4168	0.0026097	590.8664019291784	90.331	0.68983	90.541	90.242	90.932	0.20904					79	21	5	0	0	0	0.89803	2	37891	37891;37931		1.4819	1.4819	1	65375000			25201	7064	12515	12570	29046;29047	29046					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2480651736259	3	394.246005	1179.71618	4.5303	0.001786	1.0336	0.00040749	5.5638	0.0021935	394.2462823437918	89.668	1.136	90.687	90.364	91.5	1.0199					76	35	5	0	0	0	0.88031	2	37766	37766;37808		3.5871	2.1319	1	13711000			25202	7064	12515	12570	29048;29049	29048					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8694335818291	2	590.865369	1179.71618	5.1291	0.0030306	2.0323	0.0012008	7.1614	0.0042314	590.8664036490337	89.669	0.52937	90.689	90.397	90.926	1.0199					66	16	5	0	0	0	0.89803	1	37803	37803		1.4819	1.0236	1	29315000			25203	7064	12515	12570	29050	29050					0.1335149021003872
PKTKLLCKHL	10	Unmodified	_PKTKLLCKHL_					0	0	0		ENST00000519187.5_2_8:133771681-133772790:-|nuORF;ENST00000519016.5_2_8:133771146-133772850:-|nuORF;ENST00000519304.1_2_8:133771146-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	ENST00000519187.5_2_8:133771681-133772790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8699828982353	2	590.865369	1179.71618	4.6529	0.0027492	1.8496	0.0010929	6.5025	0.0038421	590.8663164590114	89.378	0.56226	90.782	90.456	91.019	1.4045					62	17	4	0	0	0	0.89803	2	37561	37561;37606		1.4819	1.0236	1	22115000			25204	7064	12515	12570	29051;29052	29051					0.1335149021003872
PKTKPQISRR	10	Unmodified	_PKTKPQISRR_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.8733398318291	2	605.872571	1209.73059	2.4564	0.0014883	-1.3299	-0.00080574	1.1266	0.00068255	605.8718499875024	85.051	0.56247	85.312	85.078	85.641	0.26083					40	17	3	0	0	0	0.89803	1	35549	35549		1.4819	0.28856	1	1451000	+		25205	10248	12516	12571	29053	29053					0.13411278682519878
PKTKPQISRR	10	Unmodified	_PKTKPQISRR_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	605.872571	1209.73059	2.4564	0.0014883	-1.3299	-0.00080574	1.1266	0.00068255	605.8718499875024	85.051	0.56247	85.312	85.078	85.641	0.26083	-0.012265	-0.0005457	NaN	1.4819	40	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1451000	+		25206	10248	12516	12571							0.13411278682519878
PKTKPQISRR	10	Unmodified	_PKTKPQISRR_					0	0	0			REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	605.872571	1209.73059	1.6833	0.0010199	-1.0647	-0.00064506	0.61867	0.00037484	605.8723032854739	84.289	0.34459	85.448	85.31	85.655	1.159	0.12336	-0.00022434	NaN	1.4819	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	869570	+		25207	10248	12516	12571							0.13411278682519878
PKTKRKKKNN	10	Unmodified	_PKTKRKKKNN_					0	0	0		nc|ENSG00000188994|O60281-2|ZNF292;ENSG00000188994|ENST00000369577|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.5979186892509	3	414.598206	1240.77279	0.90302	0.00037439	-1.149	-0.00047639	-0.24602	-0.000102	414.5976715890155	92.458	0.54696	92.458	92.197	92.744	0					63	17	5	0	0	0	0.88314	1	38665	38665		1.5923	0	1	28313000			25208	4889	12517	12572	29054	29054					0.1620325409094221
PKTPPVKAL	9	Unmodified	_PKTPPVKAL_					0	0	0		ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	475.8061096072197	2	475.805303	949.596052	1.6845	0.0008015	-1.6502	-0.00078515	0.034348	1.6343E-05	475.80435656172773	107.75	0.17738	107.75	107.65	107.82	0					27	9	4	0	0	0	0.83753	1	46252	46252		1.8442	0	1	119240000			25209	3522	12518	12573	29055	29055					0.11923825207929895
PKTPPVKAL	9	Unmodified	_PKTPPVKAL_					0	0	0		ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	ENSG00000159339|ENST00000375448|PADI4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	475.805303	949.596052	3.2827	0.0015619	-2.5253	-0.0012016	0.75741	0.00036038	475.80414037016857	107.71	0.1439	107.87	107.77	107.92	0.15781	0.060891	0.00035471	NaN	1.8442	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	136170000			25210	3522	12518	12573							0.11923825207929895
PKTQKEKPLV	10	Unmodified	_PKTQKEKPLV_					0	0	0			REV__ENSG00000148843|ENST00000369797|PDCD11	REV__ENSG00000148843|ENST00000369797|PDCD11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3596069216728	2	584.358431	1166.70231	2.5026	0.0014624	-1.6137	-0.00094299	0.88891	0.00051944	584.3571405216679	88.856	0.32307	89.079	88.938	89.262	0.2236					21	9	3	0	0	0	0.89803	1	37262	37262		1.1933	0	1	559970	+		25211	10356	12519	12574	29056	29056					0.12562535982578993
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8965331912041	2	663.896912	1325.77927	1.9365	0.0012856	-1.5994	-0.0010619	0.33701	0.00022374	663.8956032949152	81.132	1.7839	81.422	80.623	82.407	0.29056					129	57	3	0	0	0	0.89803	1	33909	33909		1.4819	0.28856	1	3097800			25212	6546	12520	12575	29057	29057					0.12941192042285365
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8970214724541	2	663.896912	1325.77927	2.1919	0.0014552	-1.5224	-0.0010107	0.66944	0.00044444	663.8957978467892	82.842	0.67295	83.113	82.695	83.368	0.27029					64	21	4	0	0	0	0.89803	1	34618	34618		1.4819	0	1	4141500			25213	6546	12520	12575	29058	29058					0.12941192042285365
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8969604372978	2	663.896912	1325.77927	2.3028	0.0015288	-1.3581	-0.00090165	0.94472	0.00062719	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	0.89803	1	34840	34840		1.4819	0	1	5935800			25214	6546	12520	12575	29059	29059					0.12941192042285365
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8952514529228	2	663.896912	1325.77927	1.4183	0.00094157	-0.98793	-0.00065588	0.43033	0.00028569	663.8958823943016	83.651	0.62804	84.839	84.579	85.207	1.1879					29	19	3	0	0	0	0.89803	1	35129	35129		1.4819	0	1	1058400			25215	6546	12520	12575	29060	29060					0.12941192042285365
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	663.896912	1325.77927	2.4525	0.0016282	-1.0835	-0.00071936	1.369	0.00090887	663.895955838561	80.436	1.3194	81.688	80.769	82.088	1.2512	0.15121	0.00092536	NaN	1.4819	99	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2397800			25216	6546	12520	12575							0.12941192042285365
PKTRAWRKQR	10	Unmodified	_PKTRAWRKQR_					0	0	0		ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	ENST00000439557.6_1_16:77225118-77228327:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	663.896912	1325.77927	1.2234	0.00081219	-1.5994	-0.0010618	-0.37604	-0.00024965	663.8957189276996	79.95	1.2678	81.667	80.612	81.879	1.7167	0.13023	0.00024039	NaN	1.4819	73	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1946900			25217	6546	12520	12575							0.12941192042285365
PKTRWVVLRYP	11	Unmodified	_PKTRWVVLRYP_					0	0	0		tr|A0A553SJT0|A0A553SJT0_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_17565PE=3SV=1	tr|A0A553SJT0|A0A553SJT0_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_17565PE=3SV=1	tr|A0A553SJT0|A0A553SJT0_NIACIAminopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_17565PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2875244021416	3	472.282106	1413.82449	3.3013	0.0015591	3.1235	0.0014752	6.4248	0.0030343	472.28355572451534	84.851	1.6059	85.112	84.533	86.139	0.26083					93	50	3	0	0	0	1.0365	1	35655	35655		1.2148	0.70888	1	1293100			25218	16261	12521	12576	29061	29061					0.13412997784826075
PKTSSSIRTI	10	Unmodified	_PKTSSSIRTI_					0	0	0		tr|A0A7D6VVA3|A0A7D6VVA3_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10020PE=3SV=1	tr|A0A7D6VVA3|A0A7D6VVA3_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10020PE=3SV=1	tr|A0A7D6VVA3|A0A7D6VVA3_9CLOTSite-specificintegraseOS=ClostridiumintestinaleOX=36845GN=HZF06_10020PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3177978396416	2	545.316763	1088.61897	1.4657	0.00079927	0.69295	0.00037787	2.1587	0.0011771	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.89803	1	30466	30466		1.3295	0	1	5427600			25219	16965	12522	12577	29062	29062					0.07820799534783873
PKTSVSSK	8	Unmodified	_PKTSVSSK_					0	0	0			REV__nc|ENSG00000178222|Q495C1-3|RNF212	REV__nc|ENSG00000178222|Q495C1-3|RNF212	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2386047244072	2	417.239993	832.465432	0.55022	0.00022957	-3.0648	-0.0012788	-2.5146	-0.0010492	417.23838305195636	70.461	0.8559	70.461	70.179	71.035	0					56	27	3	0	0	0	0.8873	1	29388	29388		4.3292	0	1	21308000	+		25220	11241	12523	12578	29063	29063					0.04249809489101608
PKTSVSSK	8	Unmodified	_PKTSVSSK_					0	0	0			REV__nc|ENSG00000178222|Q495C1-3|RNF212	REV__nc|ENSG00000178222|Q495C1-3|RNF212	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2386657595634	2	417.239993	832.465432	1.5014	0.00062642	-3.3608	-0.0014023	-1.8594	-0.00077583	417.2383602623401	70.284	1.4516	70.606	69.721	71.173	0.32224					71	46	3	0	0	0	0.8873	1	29407	29407		4.3292	0	1	17226000	+		25221	11241	12523	12578	29064	29064					0.04249809489101608
PKTSVSSK	8	Unmodified	_PKTSVSSK_					0	0	0			REV__nc|ENSG00000178222|Q495C1-3|RNF212	REV__nc|ENSG00000178222|Q495C1-3|RNF212	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.2393371462822	2	417.239993	832.465432	1.9311	0.00080573	-2.83	-0.0011808	-0.89887	-0.00037505	417.2385123838464	69.349	1.2214	70.715	69.875	71.096	1.3657					60	39	3	0	0	0	0.8873	1	29121	29121		4.3292	0	1	8977700	+		25222	11241	12523	12578	29065	29065					0.04249809489101608
PKVKIPKN	8	Unmodified	_PKVKIPKN_					0	0	0		nc|ENSG00000162641|Q5T1N1-2|AKNAD1;nc|ENSG00000162641|Q5T1N1-3|AKNAD1;nc|ENSG00000162641|Q5T1N1-4|AKNAD1;ENSG00000162641|ENST00000370001|AKNAD1	nc|ENSG00000162641|Q5T1N1-2|AKNAD1	nc|ENSG00000162641|Q5T1N1-2|AKNAD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.3070861697197	2	462.30547	922.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.14	1	103.14	102.64	103.64	0								0	0	0	1.0178	1	43251	43251		0.69038	0	1				25223	3635	12524	12579	29066	29066					0.13199244927807285
PKVKNEQT	8	Unmodified	_PKVKNEQT_					0	0	0			REV__ENSG00000044090|ENST00000265348|CUL7	REV__ENSG00000044090|ENST00000265348|CUL7	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1783325076103	3	315.178425	942.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.443	1	81.694	81.194	82.194	1.2512								0	0	0	1.0178	1	33765	33765		0.40072	0	1		+		25224	8601	12525	12580	29067	29067					0.03988883409135724
PKVNFKFF	8	Unmodified	_PKVNFKFF_					0	0	0		tr|A0A553SQQ4|A0A553SQQ4_NIACIAbortivephageresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_07115PE=4SV=1	tr|A0A553SQQ4|A0A553SQQ4_NIACIAbortivephageresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_07115PE=4SV=1	tr|A0A553SQQ4|A0A553SQQ4_NIACIAbortivephageresistanceproteinOS=NialliacirculansOX=1397GN=CEQ21_07115PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.1490051150322	3	342.863889	1025.56984	-1.9028	-0.0006524	0.018445	6.324E-06	-1.8844	-0.00064608	342.86385604084217	29.901	0.39896	29.901	29.67	30.069	0					37	12	4	0	0	0	2.3239	1	12445	12445		0	0	1	9769300			25225	16525	12526	12581	29068	29068					0.05807556036461392
PKVPKAKKP	9	Unmodified	_PKVPKAKKP_					0	0	0			REV__nc|ENSG00000189060|P07305-2|H1-0	REV__nc|ENSG00000189060|P07305-2|H1-0	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	332.2434265017509	3	331.558688	991.654236	0.22592	7.4906E-05	-2.9319	-0.0009721	-2.706	-0.00089719	331.5577113488672	48.944	0.21648	50.332	50.202	50.418	1.388					9	6	2	0	0	0	0.11901	1	20507	20507		2.7352	1.6637	1	314340	+		25226	11602	12527	12582	29069	29069					0.15807506853218456
PLAANTTVIAK	11	Unmodified	_PLAANTTVIAK_					0	0	0			REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8320190310478	2	549.829506	1097.64446	2.9217	0.0016065	1.5142	0.00083257	4.436	0.002439	549.8306833154453	107.53	0.14882	107.69	107.62	107.77	0.15781					16	7	3	0	0	0	1.0214	1	46286	46286		2.4985	0.43874	1	22187000	+		25227	15154	12528	12583	29070	29070					0.09954274057167822
PLAANTTVIAK	11	Unmodified	_PLAANTTVIAK_					0	0	0			REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.829506	1097.64446	2.728	0.0014999	1.5736	0.00086522	4.3016	0.0023651	549.8303921547852	107.58	0.13611	107.63	107.54	107.68	0.052452	-0.022957	-0.00017762	NaN	2.4985	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26586000	+		25228	15154	12528	12583							0.09954274057167822
PLAANTTVIAK	11	Unmodified	_PLAANTTVIAK_					0	0	0			REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	REV__tr|A0A553SRC4|A0A553SRC4_NIACIBeta-N-acetylhexosaminidaseOS=NialliacirculansOX=1397GN=CEQ21_00705PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.829506	1097.64446	3.1861	0.0017518	1.6429	0.00090329	4.829	0.0026551	549.8307084979821	107.53	0.13264	107.69	107.62	107.75	0.15795	0.037253	-0.00010147	NaN	2.4985	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13285000	+		25229	15154	12528	12583							0.09954274057167822
PLAFQRLG	8	Unmodified	_PLAFQRLG_					0	0	0		ENST00000472174.6_1_1:44443679-44443943:+|nuORF	ENST00000472174.6_1_1:44443679-44443943:+|nuORF	ENST00000472174.6_1_1:44443679-44443943:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1810180544853	3	301.179989	900.518136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.65	1	104.81	104.31	105.31	0.16055								0	0	0	1.0178	1	44389	44389		0.45834	0	1				25230	6747	12529	12584	29071	29071					0.06389812342581536
PLAGLRRLLL	10	Unmodified	_PLAGLRRLLL_					0	0	0		ENSG00000176894|ENST00000317479|PXMP2;PXMP2-DDB2|1|fusion	ENSG00000176894|ENST00000317479|PXMP2	ENSG00000176894|ENST00000317479|PXMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3813354372978	2	561.3795	1120.74445	0.77935	0.00043751	0.52377	0.00029404	1.3031	0.00073155	561.3797907322461	107.57	0.19677	107.57	107.45	107.65	0					32	9	4	0	0	0	0.85124	1	46102	46102		6.7232	0	1	321550000			25231	4422	12530	12585	29072	29072					0.18890556181668217
PLAKLRPQI	9	Unmodified	_PLAKLRPQI_					0	0	0		ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8	ENSG00000123094|ENST00000689635|RASSF8	ENSG00000123094|ENST00000689635|RASSF8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1403076052666	2	518.337301	1034.66005	2.3485	0.0012173	-3.426	-0.0017758	-1.0774	-0.00055848	518.3352253559802	91.613	0.38292	91.613	91.469	91.852	0					19	11	2	0	0	0	0.11787	1	38324	38324		0.6015	0	1	1389700			25232	2179	12531	12586	29073	29073					0.14410605364878393
PLAKVRRPP	9	Unmodified	_PLAKVRRPP_					0	0	0		nc|ENSG00000006118|Q24JP5-3|TMEM132A	nc|ENSG00000006118|Q24JP5-3|TMEM132A	nc|ENSG00000006118|Q24JP5-3|TMEM132A	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2276183962822	3	345.225821	1032.65563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.31	1	104.37	103.87	104.87	0.058807								0	0	0	0.42693	1	43955	43955		0.26902	0	1				25233	7810	12532	12587	29074	29074					0.1406114094197619
PLALAKRG	8	Unmodified	_PLALAKRG_					0	0	0		nc|ENSG00000135622|O95754-2|SEMA4F;ENSG00000135622|ENST00000357877|SEMA4F	nc|ENSG00000135622|O95754-2|SEMA4F	nc|ENSG00000135622|O95754-2|SEMA4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2680847048759	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.59	1	2.2433	1.7433	2.7433	0.65331								0	0	0	1.0178	1	652	652		0.79363	0	1				25234	2677	12533	12588	29075	29075					0.1039411620519104
PLALGVKG	8	Unmodified	_PLALGVKG_					0	0	0			REV__ENST00000503473.5_1_5:176730316-176737711:-|nuORF	REV__ENST00000503473.5_1_5:176730316-176737711:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7470275759697	2	377.744714	753.474875	1.4494	0.0005475	2.5906	0.00097859	4.04	0.0015261	377.74600072573423	68.432	0.81116	68.754	68.377	69.188	0.32224					55	25	3	0	0	0	0.89178	1	28594	28594		0.69038	0	1	4671300	+		25235	13517	12534	12589	29076	29076					0.0882762256528622
PLALIILFH	9	Unmodified	_PLALIILFH_					0	0	0			REV__ENST00000376561.7_1_11:70281793-70282567:+|nuORF	REV__ENST00000376561.7_1_11:70281793-70282567:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2238036990166	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.03	1	101.03	100.53	101.53	0								0	0	0	0.42693	1	42297	42297		0.26902	0	1		+		25236	12723	12535	12590	29077	29077					0.1316898862171456
PLALVALAL	9	Unmodified	_PLALVALAL_					0	0	0			REV__nc|nan|Q9BPX7-2|C7orf25	REV__nc|nan|Q9BPX7-2|C7orf25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.7983886599541	2	440.796946	879.57934	4.3884	0.0019344	-0.79798	-0.00035175	3.5904	0.0015826	440.7969070468547	91.87	0.37302	92.806	92.678	93.051	0.93623					18	11	2	0	0	0	0.11074	1	38708	38708		45.75	0	1	852840	+		25237	14581	12536	12591	29078	29078					0.13473324321967084
PLALVALAL	9	Unmodified	_PLALVALAL_					0	0	0			REV__nc|nan|Q9BPX7-2|C7orf25	REV__nc|nan|Q9BPX7-2|C7orf25	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	440.796946	879.57934	4.3884	0.0019344	-0.79798	-0.00035175	3.5904	0.0015826	440.7969070468547	91.87	0.37302	92.806	92.678	93.051	0.93623	0.017832	0.00033718	NaN	45.75	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	852840	+		25238	14581	12536	12591							0.13473324321967084
PLALVALAL	9	Unmodified	_PLALVALAL_					0	0	0			REV__nc|nan|Q9BPX7-2|C7orf25	REV__nc|nan|Q9BPX7-2|C7orf25	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	440.796946	879.57934	3.4256	0.00151	-1.7338	-0.00076424	1.6919	0.00074577	440.7963114816029	91.405	0.30191	92.77	92.597	92.899	1.366	-0.017832	-0.00048781	NaN	45.75	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712150	+		25239	14581	12536	12591							0.13473324321967084
PLAPKVRPN	9	Unmodified	_PLAPKVRPN_					0	0	0			REV__ENST00000367097.7_1_6:158931181-158931457:+|nuORF	REV__ENST00000367097.7_1_6:158931181-158931457:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3058959841728	2	496.306001	990.597449	1.5841	0.00078618	-3.5967	-0.0017851	-2.0127	-0.00099889	496.30440915894667	64.49	1.812	64.49	63.832	65.644	0					73	56	2	0	0	0	0.83213	2	26709	26709;26836		2.0598	1.2661	1	794100	+		25240	12618	12537	12592	29079;29080	29079					0.10177459296698999
PLAPRIFHI	9	Unmodified	_PLAPRIFHI_					0	0	0			REV__ENST00000368445.9_1_1:154935481-154935685:-|nuORF	REV__ENST00000368445.9_1_1:154935481-154935685:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	355.2200805544853	3	355.218555	1062.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.715	1	55.036	54.536	55.536	0.32088								0	0	0	0.42693	1	22913	22913		1.0715	0	1		+		25241	12637	12538	12593	29081	29081					0.10502336193394513
PLAQRPLP	8	Unmodified	_PLAQRPLP_					0	0	0		chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	446.2670165896416	2	446.27417	890.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.46	102.96	103.96	0								0	0	0	1.0178	1	43433	43433		2.8892	0	1				25242	182	12539	12594	29082	29082					0.08414098859600472
PLAQRPLP	8	Unmodified	_PLAQRPLP_					0	0	0		chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	chr11:1753450-1757324|193|272.51|0.26|10.02|-|1|None,CTSD|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	446.2680847048759	2	446.27417	890.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.45	1	103.51	103.01	104.01	0.059502								0	0	0	1.0178	1	43389	43389		2.8892	0	1				25243	182	12539	12594	29083	29083					0.08414098859600472
PLARLGLLRL	10	Unmodified	_PLARLGLLRL_					0	0	0		ENST00000395900.1_1_11:32457375-32459526:+|nuORF	ENST00000395900.1_1_11:32457375-32459526:+|nuORF	ENST00000395900.1_1_11:32457375-32459526:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3806030154228	2	561.3795	1120.74445	3.2014	0.0017972	-2.6793	-0.0015041	0.52209	0.00029309	561.3780000728343	107.51	0.22853	107.67	107.54	107.77	0.15781					43	11	5	0	0	0	0.85124	1	46222	46222		6.7232	0	1	1871999999.9999998			25244	6295	12540	12595	29084	29084					0.1889055618164548
PLARLGLLRL	10	Unmodified	_PLARLGLLRL_					0	0	0		ENST00000395900.1_1_11:32457375-32459526:+|nuORF	ENST00000395900.1_1_11:32457375-32459526:+|nuORF	ENST00000395900.1_1_11:32457375-32459526:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	561.3795	1120.74445	3.2319	0.0018143	-3.1006	-0.0017406	0.13127	7.369E-05	561.3777612370085	107.51	0.21117	107.67	107.54	107.75	0.15795	-0.00018445	-0.00022103	NaN	6.7232	39	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1337400000			25245	6295	12540	12595							0.1889055618164548
PLASLMRLLL	10	Unmodified	_PLASLMRLLL_					0	0	0			REV__nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2	REV__nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8580200076103	2	563.85447	1125.69439	3.2523	0.0018338	2.5937	0.0014625	5.846	0.0032963	563.8557472639194	105.99	0.13488	106.15	106.07	106.2	0.16174					15	6	3	0	0	0	0.88314	1	45208	45208		3.2813	0.54611	1	59302000	+		25246	14488	12541	12596	29085	29085					0.13656685461478446
PLASLMRLLL	10	Unmodified	_PLASLMRLLL_					0	0	0			REV__nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2	REV__nc|ENSG00000171130|Q8NHE4-4|ATP6V0E2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8580200076103	2	563.85447	1125.69439	3.2487	0.0018318	4.1753	0.0023542	7.424	0.0041861	563.8556830703635	107.51	0.19357	107.67	107.54	107.74	0.15795					14	9	2	0	0	0	0.88314	1	46189	46189		3.2813	0.28607	1	147620000	+		25247	14488	12541	12596	29086	29086					0.13656685461478446
PLAWKLWNS	9	Unmodified	_PLAWKLWNS_					0	0	0			REV__ENST00000361170.6_1_1:156496043-156496265:-|nuORF	REV__ENST00000361170.6_1_1:156496043-156496265:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	558.3527709841728	2	557.805834	1113.59712	1.7207	0.0009598	1.9692	0.0010984	3.6898	0.0020582	557.8066558728302	65.665	0.39147	67.574	67.407	67.799	1.9085					19	12	2	0	0	0	0.094078	1	27575	27575		24.674	4.2203	1	1469600	+		25248	12599	12542	12597	29087	29087					0.044860395768409944
PLCLHLPFPL	10	Unmodified	_PLCLHLPFPL_					0	0	0		ENST00000393868.6_1_2:84686367-84686544:-|nuORF	ENST00000393868.6_1_2:84686367-84686544:-|nuORF	ENST00000393868.6_1_2:84686367-84686544:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3282958865166	2	575.328088	1148.64162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.12	109.62	110.62	0								0	0	0	0.66264	1	47681	47681		0	0	1				25249	6275	12543	12598	29088	29088					0.07324727398690811
PLCRKPVK	8	Unmodified	_PLCRKPVK_					0	0	0		ENST00000461652.2_1_13:31835091-31857210:+|nuORF;ENSG00000187676|ENST00000343307|B3GLCT	ENST00000461652.2_1_13:31835091-31857210:+|nuORF	ENST00000461652.2_1_13:31835091-31857210:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.2176086306572	3	314.196874	939.568792	0.27632	8.6818E-05	-0.78411	-0.00024636	-0.50779	-0.00015955	314.1965772472211	27.137	0.37547	27.398	27.14	27.515	0.26173					17	11	2	0	0	0	2.3239	1	11385	11385		0.45834	0	1	475720			25250	4834	12544	12599	29089	29089					0.09659018395916519
PLDDMCDANP	10	Unmodified	_PLDDMCDANP_					0	0	0			REV__nc|ENSG00000170153|Q9ULK6-4|RNF150	REV__nc|ENSG00000170153|Q9ULK6-4|RNF150	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1089.905810534954	1	1090.41797	1089.4107	0.28019	0.00030553	-1.8383	-0.0020045	-1.5581	-0.0016989	1091.4227461002256	32.133	0.14383	33.414	33.36	33.503	1.2813					7	4	2	0	0	0	0.12542	1	13461	13461		1.6526	0.96225	1	681960	+		25251	10975	12545	12600	29090	29090					-0.13043313436173776
PLDFEAER	8	Unmodified	_PLDFEAER_					0	0	0		nc|ENSG00000008300|Q9NYQ7-2|CELSR3;ENSG00000008300|ENST00000164024|CELSR3;CELSR3|p.Y895Pfs*11|1|0.07|ENSG00000008300|chr3:48659949-48659953|GATAG/-|frameshift_variant	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	976.4799682497978	1	976.473437	975.46616	1.7706	0.0017289	3.1184	0.003045	4.889	0.0047739	976.4783757612397	79.578	1.3215	79.578	78.968	80.289	0					55	42	2	0	0	0	0.88261	1	33191	33191		7.2892	2.0586	1	520280			25252	529	12546	12601	29091	29091					-0.022553958618573233
PLDFEAER	8	Unmodified	_PLDFEAER_					0	0	0		nc|ENSG00000008300|Q9NYQ7-2|CELSR3;ENSG00000008300|ENST00000164024|CELSR3;CELSR3|p.Y895Pfs*11|1|0.07|ENSG00000008300|chr3:48659949-48659953|GATAG/-|frameshift_variant	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	nc|ENSG00000008300|Q9NYQ7-2|CELSR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	976.4763061404228	1	976.473437	975.46616	2.2068	0.0021548	3.158	0.0030837	5.3648	0.0052386	976.4768432411468	83.179	0.61242	83.179	82.83	83.443	0					27	19	2	0	0	0	0.88261	1	34696	34696		7.2892	2.5332	1	455010			25253	529	12546	12601	29092	29092					-0.022553958618573233
PLDGDDPEHI	10	Unmodified	_PLDGDDPEHI_					0	0	0		ENST00000461522.1_1_3:69110938-69112631:-|nuORF;nc|ENSG00000144744|Q8TBC4-2|UBA3;ENSG00000144744|ENST00000361055|UBA3	ENST00000461522.1_1_3:69110938-69112631:-|nuORF	ENST00000461522.1_1_3:69110938-69112631:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2524291872978	2	554.251286	1106.48802	1.9059	0.0010563	-0.13373	-7.412E-05	1.7721	0.0009822	554.7526048701294	84.656	0.30815	85.815	85.687	85.995	1.159					23	9	3	0	0	0	0.85124	1	35563	35563		6.7232	0	1	3220400			25254	3093	12547	12602	29093	29093					-0.06096635903963943
PLDKTQFSVP	10	Unmodified	_PLDKTQFSVP_					0	0	0			REV__tr|A0A553SLI9|A0A553SLI9_NIACIDiaminopimelateepimeraseOS=NialliacirculansOX=1397GN=dapFPE=3SV=1	REV__tr|A0A553SLI9|A0A553SLI9_NIACIDiaminopimelateepimeraseOS=NialliacirculansOX=1397GN=dapFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1131.611621081829	1	1131.60445	1130.59717	3.8846	0.0043958	1.5679	0.0017743	5.4525	0.0061701	1131.6060061676988	101.18	0.20543	101.25	101.12	101.33	0.067009					19	6	4	0	0	0	0.82659	1	42343	42343		9.3831	3.1773	1	79066000	+		25255	14985	12548	12603	29094	29094					0.03709994786186144
PLDLLSRQV	9	Unmodified	_PLDLLSRQV_					0	0	0			REV__nc|ENSG00000124678|Q8WWU5-3|TCP11	REV__nc|ENSG00000124678|Q8WWU5-3|TCP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3057739138603	2	520.808574	1039.60259	4.6756	0.0024351	-3.1681	-0.00165	1.5075	0.00078513	520.8069967714154	88.301	1.0529	89.747	89.093	90.146	1.4467					56	32	2	0	0	0	0.34572	1	37016	37016		23.148	7.3012	1	7775800	+		25256	9653	12549	12604	29095	29095					0.08437718368668357
PLDMGKRN	8	Unmodified	_PLDMGKRN_					0	0	0		ENST00000496708.1_1_10:92980556-92982474:+|nuORF	ENST00000496708.1_1_10:92980556-92982474:+|nuORF	ENST00000496708.1_1_10:92980556-92982474:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.4861328005791	1	930.482562	929.475285	2.5676	0.0023891	-1.1499	-0.0010699	1.4177	0.0013192	930.4815630887036	87.102	0.88319	87.102	86.551	87.434	0					113	35	4	0	0	0	0.89008	1	36121	36121		2.5775	2.5775	1	83513000			25257	6956	12550	12605	29096	29096					0.007726742228328476
PLDMGKRN	8	Unmodified	_PLDMGKRN_					0	0	0		ENST00000496708.1_1_10:92980556-92982474:+|nuORF	ENST00000496708.1_1_10:92980556-92982474:+|nuORF	ENST00000496708.1_1_10:92980556-92982474:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.4875366091728	1	930.482562	929.475285	2.6328	0.0024497	-0.92535	-0.00086102	1.7074	0.0015887	930.4817895002279	87.019	0.89062	87.263	86.606	87.496	0.24387					98	35	3	0	0	0	0.88504	1	36145	36145		5.7604	5.7604	1	52791000			25258	6956	12550	12605	29097	29097					0.007726742228328476
PLDQEATGHF	10	Unmodified	_PLDQEATGHF_					0	0	0			REV__ENST00000563894.1_1_15:75090907-75091078:+|nuORF	REV__ENST00000563894.1_1_15:75090907-75091078:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	558.3526489138603	2	557.76182	1113.50909	2.032	0.0011334	2.0794	0.0011598	4.1114	0.0022932	557.7630595667206	66.222	0.24092	67.611	67.448	67.689	1.3888					11	7	2	0	0	0	0.12475	1	27721	27721		12.532	1.4171	1	536550	+		25259	9116	12551	12606	29098	29098					-0.04312625804413983
PLEDQLVMV	9	Unmodified	_PLEDQLVMV_					0	0	0		nc|ENSG00000134571|Q14896-2|MYBPC3;ENSG00000134571|ENST00000545968|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	nc|ENSG00000134571|Q14896-2|MYBPC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2767211794853	2	522.275718	1042.53688	1.5323	0.0008003	-0.95987	-0.00050131	0.57246	0.00029898	522.2756661995536	55.159	0.65831	56.564	56.302	56.96	1.4048					76	22	4	0	0	0	0.30098	1	23228	23228		25.399	0	1	10889000			25260	2624	12552	12607	29099	29099					0.017315611314415946
PLEFEQLK	8	Unmodified	_PLEFEQLK_					0	0	0			REV__ENST00000440760.5_1_2:27594325-27599583:+|nuORF	REV__ENST00000440760.5_1_2:27594325-27599583:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2802917361259	2	502.276575	1002.5386	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.689	1	44.689	44.189	45.189	0								0	0	0	1.0178	1	18702	18702		18.135	1.1927	1		+		25261	9430	12553	12608	29100	29100					0.037429382117238674
PLELANTLYN	10	Unmodified	_PLELANTLYN_					0	0	0		nc|ENSG00000147687|Q6P1N9-2|TATDN1;ENSG00000147687|ENST00000276692|TATDN1;ENST00000523214.5_1_8:125500837-125516518:-|nuORF	nc|ENSG00000147687|Q6P1N9-2|TATDN1	nc|ENSG00000147687|Q6P1N9-2|TATDN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3047973513603	2	574.303321	1146.59209	1.133	0.00065071	-0.1753	-0.00010067	0.95775	0.00055004	574.3043068133304	53.702	0.36629	55.102	54.92	55.286	1.4005					58	14	5	0	0	0	0.70618	1	22433	22433		18.146	0	1	40455000			25262	3191	12554	12609	29101	29101					0.0246569092360005
PLELANTLYN	10	Unmodified	_PLELANTLYN_					0	0	0		nc|ENSG00000147687|Q6P1N9-2|TATDN1;ENSG00000147687|ENST00000276692|TATDN1;ENST00000523214.5_1_8:125500837-125516518:-|nuORF	nc|ENSG00000147687|Q6P1N9-2|TATDN1	nc|ENSG00000147687|Q6P1N9-2|TATDN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3051635622978	2	574.303321	1146.59209	0.72722	0.00041764	0.29175	0.00016755	1.019	0.0005852	574.3047113323406	53.221	0.40179	55.191	54.986	55.387	1.9697					68	17	5	0	0	0	0.6819	1	22275	22275		19.257	0	1	34212000			25263	3191	12554	12609	29102	29102					0.0246569092360005
PLENAGQDSA	10	Unmodified	_PLENAGQDSA_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;TTN|p.T6904Lfs*6|1|0.08|ENSG00000155657|chr2:178723439-178723439|T/-|frameshift_variant;TTN|p.V5150Afs*3|1|0.06|ENSG00000155657|chr2:178732661-178732661|A/-|frameshift_variant;TTN|p.R4157*|1|0.07|ENSG00000155657|chr2:178739814-178739815|-/C|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2311279177666	2	501.230353	1000.44615	2.8071	0.001407	-0.71475	-0.00035825	2.0924	0.0010488	501.22995793928993	83.001	0.46171	84.213	83.951	84.413	1.2125					62	14	6	0	0	0	0.79268	1	34848	34848		13.042	2.8591	1	7433400			25264	3425	12555	12610	29103	29103					-0.054051915924674176
PLFDETMDDT	10	Unmodified	_PLFDETMDDT_					0	0	0			REV__ENSG00000148158|ENST00000374232|SNX30	REV__ENSG00000148158|ENST00000374232|SNX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.2479736208916	2	592.244812	1182.47507	0.74412	0.0004407	2.8071	0.0016625	3.5512	0.0021032	592.2468580286842	53.182	0.27485	55.152	55.02	55.295	1.9697					24	11	4	0	0	0	0.846	1	22317	22317		7.2892	0.56607	1	3850400	+		25265	10338	12556	12611	29104	29104					-0.10886835078349577
PLFGTINASL	10	Unmodified	_PLFGTINASL_					0	0	0			REV__ENSG00000108506|ENST00000251334|INTS2	REV__ENSG00000108506|ENST00000251334|INTS2	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7913085818291	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.324	1	65.731	65.231	66.231	1.4071								0	0	0	0.61972	1	26977	26977		20.454	0	1		+		25266	9257	12557	12612	29105	29105					0.05062627103052364
PLFIPWKKLYH	11	Unmodified	_PLFIPWKKLYH_					0	0	0		nc|ENSG00000134452|Q8NFZ0-2|FBH1;ENSG00000134452|ENST00000362091|FBH1;ENST00000494526.1_1_10:5948484-5951317:+|nuORF	nc|ENSG00000134452|Q8NFZ0-2|FBH1	nc|ENSG00000134452|Q8NFZ0-2|FBH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2852661013603	3	481.283336	1440.82818	5.4031	0.0026004	0.25658	0.00012349	5.6597	0.0027239	481.28311030345975	88.282	1.2053	89.338	88.518	89.723	1.0562					102	37	3	0	0	0	1.0388	1	37267	37267		0.50596	0	1	3007300			25267	2617	12558	12613	29106	29106					0.1253966755868987
PLFLAVPILF	10	Unmodified	_PLFLAVPILF_					0	0	0			REV__ENST00000418635.6_1_6:35393953-35394385:+|nuORF	REV__ENST00000418635.6_1_6:35393953-35394385:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2382995486259	3	377.238844	1128.6947	1.054	0.0003976	-3.0256	-0.0011414	-1.9716	-0.00074377	377.2374650929808	43.55	0.30577	44.904	44.765	45.071	1.3536					17	9	2	0	0	0	0.41992	1	18242	18242		20.415	0	1	3562600	+		25268	12960	12559	12614	29107	29107					0.13550428452981578
PLFLLLKLK	9	Unmodified	_PLFLLLKLK_					0	0	0			REV__tr|A0A7D6ZZ24|A0A7D6ZZ24_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04710PE=4SV=1	REV__tr|A0A7D6ZZ24|A0A7D6ZZ24_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04710PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2544128298759	3	362.254606	1083.74199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.764	1	64.764	64.264	65.264	0								0	0	0	0.42693	1	26994	26994		0	0	1		+		25269	15787	12560	12615	29108	29108					0.2034670772395657
PLFPCKGTL	9	Unmodified	_PLFPCKGTL_					0	0	0		ENST00000288986.6_2_3:136667407-136667713:+|nuORF	ENST00000288986.6_2_3:136667407-136667713:+|nuORF	ENST00000288986.6_2_3:136667407-136667713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2676269412041	2	488.270238	974.525924	0.53888	0.00026312	-0.25627	-0.00012513	0.28261	0.00013799	488.2712746526378	56.292	0.47646	57.702	57.551	58.028	1.4099					33	15	3	0	0	0	0.54523	1	23674	23674		13.508	0	1	13075000			25270	5719	12561	12616	29109	29109					0.03764203547837042
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2335082888603	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.272	1	61.272	60.772	61.772	0								0	0	0	0.66218	1	25549	25549		0.77653	0	1		+		25271	9276	12562	12617	29110	29110					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2338439822197	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.205	1	63.205	62.705	63.705	0								0	0	0	0.66218	1	26351	26351		0.77653	0	1		+		25272	9276	12562	12617	29111	29111					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2331725955009	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.614	1	65.614	65.114	66.114	0								0	0	0	0.66218	1	27341	27341		0.77653	0	1		+		25273	9276	12562	12617	29112	29112					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2328979372978	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.914	1	74.914	74.414	75.414	0								0	0	0	0.66218	1	31189	31189		0.77653	0	1		+		25274	9276	12562	12617	29113	29113					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2336608767509	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.367	1	82.367	81.867	82.867	0								0	0	0	0.66218	1	34314	34314		0.77653	0	1		+		25275	9276	12562	12617	29114	29114					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2337524294853	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.714	1	89.714	89.214	90.214	0								0	0	0	0.66218	1	37499	37499		0.77653	0	1		+		25276	9276	12562	12617	29115	29115					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2335998415947	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.059	1	61.389	60.889	61.889	0.32974								0	0	0	0.66218	1	25583	25583		0.77653	0	1		+		25277	9276	12562	12617	29116	29116					0.12196936584973628
PLFPLSLLQV	10	Unmodified	_PLFPLSLLQV_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2336608767509	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.858	1	78.168	77.668	78.668	0.30933								0	0	0	0.66218	1	32557	32557		0.77653	0	1		+		25278	9276	12562	12617	29117	29117					0.12196936584973628
PLFPLVFW	8	Unmodified	_PLFPLVFW_					0	0	0			REV__nc|ENSG00000105875|A4D1P6-3|WDR91	REV__nc|ENSG00000105875|A4D1P6-3|WDR91	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1971008181572	3	340.196868	1017.56878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.782	1	39.782	39.282	40.282	0								0	0	0	1.0178	1	16673	16673		0.45834	0	1		+		25279	9193	12563	12618	29118	29118					0.06069341667557637
PLFPLVFW	8	Unmodified	_PLFPLVFW_					0	0	0			REV__nc|ENSG00000105875|A4D1P6-3|WDR91	REV__nc|ENSG00000105875|A4D1P6-3|WDR91	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1964904665947	3	340.196868	1017.56878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.573	1	42.573	42.073	43.073	0								0	0	0	1.0178	1	17816	17816		0.45834	0.057624	1		+		25280	9193	12563	12618	29119	29119					0.06069341667557637
PLFPVQVQTL	10	Unmodified	_PLFPVQVQTL_					0	0	0		nc|ENSG00000188818|Q9H8X9-2|ZDHHC11;ENSG00000206077|ENST00000508859|ZDHHC11B;ENSG00000188818|ENST00000283441|ZDHHC11	nc|ENSG00000188818|Q9H8X9-2|ZDHHC11	nc|ENSG00000188818|Q9H8X9-2|ZDHHC11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3316528201103	2	571.334424	1140.6543	2.0673	0.0011811	-1.6108	-0.00092029	0.45649	0.00026081	571.3330584377419	73.185	0.3291	73.51	73.276	73.605	0.32494					17	10	2	0	0	0	0.85124	1	30599	30599		6.7232	0.51738	1	1373000			25281	4878	12564	12619	29120	29120					0.08959462062580315
PLFQPQQL	8	Unmodified	_PLFQPQQL_					0	0	0			REV__MER50_dup1957|chr13:22893204-22893715:+|1.7221420676472057|0.1175728833499881|3.87|418.0|16|1|anti-sense	REV__MER50_dup1957|chr13:22893204-22893715:+|1.7221420676472057|0.1175728833499881|3.87|418.0|16|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.3450500369072	2	485.77146	969.528367	3.8578	0.001874	-1.4122	-0.00068598	2.4456	0.001188	485.7710805893755	96.994	0.054893	97.279	97.242	97.297	0.28442					4	2	2	0	0	0	2.3239	1	40801	40801		0.79363	0	1	1232700	+		25282	14361	12565	12620	29121	29121					0.04238375277122941
PLFSSEKKY	9	Unmodified	_PLFSSEKKY_					0	0	0		ENSG00000148450|ENST00000376510|MSRB2	ENSG00000148450|ENST00000376510|MSRB2	ENSG00000148450|ENST00000376510|MSRB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7966186404228	2	549.795132	1097.57571	2.7696	0.0015227	1.0223	0.00056203	3.7919	0.0020848	549.7950631313488	74.934	0.46803	76.24	75.996	76.464	1.3063					40	14	4	0	0	0	0.34572	1	31453	31453		23.148	9.2424	1	3629700			25283	3212	12566	12621	29122	29122					0.030826097574845335
PLFSTATPVP	10	Unmodified	_PLFSTATPVP_					0	0	0			REV__ENST00000487459.5_1_7:116660544-116830896:+|nuORF	REV__ENST00000487459.5_1_7:116660544-116830896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2850829958916	2	515.2844	1028.55425	2.1887	0.0011278	-1.1176	-0.0005759	1.071	0.00055189	515.2837909263026	67.733	0.57523	69.111	68.819	69.394	1.3778					32	18	2	0	0	0	0.44465	1	28386	28386		30.637	3.0077	1	18939000	+		25284	13401	12567	12622	29123	29123					0.041112247287628634
PLGAGHII	8	Unmodified	_PLGAGHII_					0	0	0			REV__ENSG00000085563|ENST00000622132|ABCB1	REV__ENSG00000085563|ENST00000622132|ABCB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.4654418826103	1	777.46175	776.454474	2.6189	0.0020361	2.652	0.0020618	5.2709	0.004098	777.4635177115023	108.92	0.91776	109.08	108.67	109.58	0.15898					86	44	2	0	0	0	0.89198	2	47290	47290;47366		0	0	1	18832000	+		25285	8853	12568	12623	29124;29125	29124					0.05730451905492373
PLGASGPL	8	Unmodified	_PLGASGPL_					0	0	0			REV__ENSG00000171812|ENST00000397799|COL8A2	REV__ENSG00000171812|ENST00000397799|COL8A2	MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2065612673759	2	356.205421	710.39629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.23	1	101.3	100.8	101.8	0.067009								0	0	0	1.0178	1	42384	42384		2.8892	0	1		+		25286	11045	12569	12624	29126	29126					0.02950770260201807
PLGASGPL	8	Unmodified	_PLGASGPL_					0	0	0			REV__ENSG00000171812|ENST00000397799|COL8A2	REV__ENSG00000171812|ENST00000397799|COL8A2	MSMS	GG20161007_CRH_Patient100_W632_01	3	356.2068664431572	2	356.205421	710.39629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.05	1	101.23	100.73	101.73	0.18047								0	0	0	1.0178	1	42518	42518		2.8892	0	1		+		25287	11045	12569	12624	29127	29127					0.02950770260201807
PLGASGPL	8	Unmodified	_PLGASGPL_					0	0	0			REV__ENSG00000171812|ENST00000397799|COL8A2	REV__ENSG00000171812|ENST00000397799|COL8A2	MSMS	GG20161007_CRH_Patient100_W632_02	4	356.2078124880791	2	356.205421	710.39629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.22	1	103.4	102.9	103.9	0.18066								0	0	0	1.0178	1	43443	43443		2.8892	0	1		+		25288	11045	12569	12624	29128	29128					0.02950770260201807
PLGESIKYP	9	Unmodified	_PLGESIKYP_					0	0	0			REV__SH3PXD2A-RB1|1|fusion	REV__SH3PXD2A-RB1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1003.549060046673	1	1003.54587	1002.5386	2.4439	0.0024526	0.12476	0.0001252	2.5687	0.0025778	1003.54594159504	76.485	0.25539	76.807	76.631	76.887	0.32163					11	7	2	0	0	0	0.15478	1	32002	32002		38.151	4.0487	1	613590	+		25289	14619	12570	12625	29129	29129					0.03742938211712499
PLGGAAAV	8	Unmodified	_PLGGAAAV_					0	0	0		FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant;nc|ENSG00000188732|A4D161-3|FAM221A;nc|ENSG00000188732|A4D161-2|FAM221A;ENSG00000188732|ENST00000344962|FAM221A;ENST00000462546.5_1_7:23719819-23732088:+|nuORF	FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant	FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1606017947197	2	328.192314	654.370075	-1.6351	-0.00053662	-0.094004	-3.0852E-05	-1.7291	-0.00056747	328.19223943571444	10.22	0.55629	10.871	10.459	11.016	0.65058					23	17	2	0	0	0	2.3239	1	4197	4197		2.8892	0	1	237660			25290	4874	12571	12626	29130	29130					0.029065010887052267
PLGGAAAV	8	Unmodified	_PLGGAAAV_					0	0	0		FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant;nc|ENSG00000188732|A4D161-3|FAM221A;nc|ENSG00000188732|A4D161-2|FAM221A;ENSG00000188732|ENST00000344962|FAM221A;ENST00000462546.5_1_7:23719819-23732088:+|nuORF	FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant	FAM221A|p.R53Nfs*4|1|0.11|ENSG00000188732|chr7:23684591-23684591|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	328.1596557497978	2	328.192314	654.370075	-0.53977	-0.00017715	-1.8166	-0.00059619	-2.3564	-0.00077334	328.1916018686153	10.119	0.37944	10.864	10.634	11.014	0.74462					18	11	2	0	0	0	2.3239	1	4169	4169		2.8892	0	1	394170			25291	4874	12571	12626	29131	29131					0.029065010887052267
PLGLFRHL	8	Unmodified	_PLGLFRHL_					0	0	0			REV__ENSG00000163082|ENST00000321276|SGPP2	REV__ENSG00000163082|ENST00000321276|SGPP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1916686892509	3	318.19575	951.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.707	1	56.028	55.528	56.528	0.32088								0	0	0	1.0178	1	23322	23322		0.45834	0	1		+		25292	10671	12572	12627	29132	29132					0.08770091613553177
PLGLFRHL	8	Unmodified	_PLGLFRHL_					0	0	0			REV__ENSG00000163082|ENST00000321276|SGPP2	REV__ENSG00000163082|ENST00000321276|SGPP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1921264529228	3	318.19575	951.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.446	1	56.768	56.268	57.268	0.32103								0	0	0	1.0178	1	23661	23661		0.45834	0	1		+		25293	10671	12572	12627	29133	29133					0.08770091613553177
PLGLQRRRTA	10	Unmodified	_PLGLQRRRTA_					0	0	0			REV__ENST00000517532.5_2_8:126104142-126114260:+|nuORF	REV__ENST00000517532.5_2_8:126104142-126114260:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3588744997978	2	584.357088	1166.69962	2.581	0.0015082	-0.22057	-0.00012889	2.3605	0.0013793	584.3571473356998	75.356	0.70741	76.662	76.343	77.051	1.3063					33	22	2	0	0	0	0.84024	1	31665	31665		7.9102	1.187	1	2180500	+		25294	13606	12573	12628	29134	29134					0.122941253683166
PLGLQRRRTA	10	Unmodified	_PLGLQRRRTA_					0	0	0			REV__ENST00000517532.5_2_8:126104142-126114260:+|nuORF	REV__ENST00000517532.5_2_8:126104142-126114260:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3595458865166	2	584.357088	1166.69962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.045	1	76.826	76.326	77.326	1.7817								0	0	0	0.65703	1	31478	31478		7.9102	0	1		+		25295	13606	12573	12628	29135	29135					0.122941253683166
PLGPPPADTL	10	Unmodified	_PLGPPPADTL_					0	0	0		nc|ENSG00000106948|Q7Z591-4|AKNA;nc|ENSG00000106948|Q7Z591-5|AKNA;nc|ENSG00000106948|Q7Z591-8|AKNA;nc|ENSG00000106948|Q7Z591-7|AKNA;nc|ENSG00000106948|Q7Z591-2|AKNA;ENSG00000106948|ENST00000374088|AKNA	nc|ENSG00000106948|Q7Z591-4|AKNA	nc|ENSG00000106948|Q7Z591-4|AKNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2682678103447	2	489.26875	976.522947	0.94032	0.00046007	-0.82117	-0.00040177	0.11915	5.8297E-05	489.26857859835326	55.821	0.40792	57.79	57.618	58.026	1.9684					28	13	3	0	0	0	0.22411	1	23427	23427		46.021	4.1813	1	4858600			25296	1589	12574	12629	29136	29136					0.03374651694673503
PLGRAARA	8	Unmodified	_PLGRAARA_					0	0	0			REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	811.4911376833916	1	811.489696	810.48242	1.2625	0.0010245	-0.76222	-0.00061854	0.50029	0.00040598	811.4885738809381	70.284	0.44913	70.606	70.35	70.799	0.32224					36	14	3	0	0	0	0.88409	1	29476	29476		6.3541	0	1	9282700	+		25297	12319	12575	12630	29137	29137					0.06959774885547176
PLGRAARA	8	Unmodified	_PLGRAARA_					0	0	0			REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	811.489696	810.48242	1.6335	0.0013255	-2.246	-0.0018226	-0.61253	-0.00049706	811.4875195740478	70.461	0.47693	70.461	70.21	70.687	0	-0.17958	-0.00095993	NaN	6.3541	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11370000	+		25298	12319	12575	12630							0.06959774885547176
PLGRAARA	8	Unmodified	_PLGRAARA_					0	0	0			REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	811.489696	810.48242	1.2625	0.0010245	-0.76222	-0.00061854	0.50029	0.00040598	811.4885738809381	70.284	0.44913	70.606	70.35	70.799	0.32224	-0.035167	0.00024412	NaN	6.3541	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9282700	+		25299	12319	12575	12630							0.06959774885547176
PLGRAARA	8	Unmodified	_PLGRAARA_					0	0	0			REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	811.489696	810.48242	1.7067	0.001385	-0.40026	-0.00032481	1.3064	0.0010602	811.4880085300942	69.31	0.34573	70.676	70.501	70.847	1.3657	0.034973	0.00053785	NaN	6.3541	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3611600	+		25300	12319	12575	12630							0.06959774885547176
PLGRAARA	8	Unmodified	_PLGRAARA_					0	0	0			REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	REV__ENST00000302472.3_1_5:40679945-40680071:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	811.489696	810.48242	0.93054	0.00075512	0.046304	3.7575E-05	0.97684	0.0007927	811.4890790089244	68.968	0.30006	70.821	70.648	70.948	1.853	0.17978	0.00090024	NaN	6.3541	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2540600	+		25301	12319	12575	12630							0.06959774885547176
PLGVSALDVYN	11	Unmodified	_PLGVSALDVYN_					0	0	0		tr|A0A553SQ11|A0A553SQ11_NIACIAnthranilatesynthasecomponentIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_12775PE=4SV=1	tr|A0A553SQ11|A0A553SQ11_NIACIAnthranilatesynthasecomponentIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_12775PE=4SV=1	tr|A0A553SQ11|A0A553SQ11_NIACIAnthranilatesynthasecomponentIfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_12775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3052245974541	2	574.303321	1146.59209	0.72722	0.00041764	0.29175	0.00016755	1.019	0.0005852	574.3047113323406	53.221	0.40179	55.191	54.986	55.387	1.9697					68	17	5	0	0	0	0.84637	1	22363	22363		13.042	2.243	1	34212000			25302	16490	12576	12631	29138	29138					0.024656909235773128
PLHPCQRS	8	Unmodified	_PLHPCQRS_					0	0	0			REV__ENST00000338154.10_1_X:53964145-53964379:-|nuORF	REV__ENST00000338154.10_1_X:53964145-53964379:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	313.1621276736259	3	313.1606	936.45997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.943	1	75.261	74.761	75.761	1.318								0	0	0	1.0178	1	31029	31029		0.45834	0	1		+		25303	12479	12577	12632	29139	29139					-0.010801925743635366
PLHPLLPLVAW	11	Unmodified	_PLHPLLPLVAW_					0	0	0			REV__nc|ENSG00000290691|A6NGW2|STRCP1	REV__nc|ENSG00000290691|A6NGW2|STRCP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3845092654228	2	628.381709	1254.74886	1.1909	0.00074836	2.435	0.0015301	3.6259	0.0022785	628.3833030097504	79.502	0.67828	81.219	80.765	81.444	1.7167					46	21	3	0	0	0	1.0357	1	33309	33309		1.4819	0.15237	1	1388400	+		25304	11929	12578	12633	29140	29140					0.1316802060455302
PLHPTAGG	8	Unmodified	_PLHPTAGG_					0	0	0			REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	375.2008849978447	2	375.20067	748.386788	-0.21787	-8.1746E-05	2.6687	0.0010013	2.4508	0.00091953	375.2016423417522	63.484	0.47253	63.484	63.24	63.713	0					23	14	2	0	0	0	0.89176	1	26444	26444		0.79363	0	1	1381500	+		25305	12368	12579	12634	29141	29141					0.002530019746814105
PLHPTAGG	8	Unmodified	_PLHPTAGG_					0	0	0			REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	375.2020446658134	2	375.20067	748.386788	1.7847	0.00066963	0.78324	0.00029387	2.568	0.0009635	375.2010034118127	64.757	0.69934	65.084	64.753	65.452	0.32689					34	21	2	0	0	0	0.89176	1	27119	27119		0.79363	0	1	1476400	+		25306	12368	12579	12634	29142	29142					0.002530019746814105
PLHPTAGG	8	Unmodified	_PLHPTAGG_					0	0	0			REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	375.20067	748.386788	-0.21787	-8.1746E-05	2.6687	0.0010013	2.4508	0.00091953	375.2016423417522	63.484	0.47253	63.484	63.24	63.713	0	0	0	NaN	0.79363	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1381500	+		25307	12368	12579	12634							0.002530019746814105
PLHPTAGG	8	Unmodified	_PLHPTAGG_					0	0	0			REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	REV__ENST00000311177.6_1_17:46699388-46699802:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	375.20067	748.386788	1.7847	0.00066963	0.78324	0.00029387	2.568	0.0009635	375.2010034118127	64.757	0.69934	65.084	64.753	65.452	0.32689	0	0	NaN	0.79363	34	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1476400	+		25308	12368	12579	12634							0.002530019746814105
PLHPVHRQ	8	Unmodified	_PLHPVHRQ_					0	0	0			REV__ENST00000517951.5_1_5:156921784-156923960:-|nuORF	REV__ENST00000517951.5_1_5:156921784-156923960:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2814819216728	2	492.280318	982.546083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.039	1	92.039	91.539	92.539	0								0	0	0	1.0178	1	38461	38461		0.79363	0	1		+		25309	13609	12580	12635	29143	29143					0.054111353226630854
PLHRKKLV	8	Unmodified	_PLHRKKLV_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	495.8347961306572	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.16	1	118.2	117.7	118.7	0.041039								0	0	0	1.0178	1	50761	50761		0.79363	0	1				25310	3898	12581	12636	29144	29144					0.15458042430327623
PLHRKKLV	8	Unmodified	_PLHRKKLV_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.8345825076103	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.32	1	113.49	112.99	113.99	0.17579								0	0	0	1.0178	1	49133	49133		0.79363	0	1				25311	3898	12581	12636	29145	29145					0.15458042430327623
PLHRKKLV	8	Unmodified	_PLHRKKLV_					0	0	0		nc|ENSG00000166387|Q8ND30-3|PPFIBP2;nc|ENSG00000166387|Q8ND30-2|PPFIBP2;ENSG00000166387|ENST00000299492|PPFIBP2;ENST00000524495.5_1_11:7669669-7672116:+|nuORF	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	nc|ENSG00000166387|Q8ND30-3|PPFIBP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.8364135622978	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.92	1	92.286	91.786	92.786	1.366								0	0	0	1.0178	1	38288	38288		6.3541	3.4649	1				25312	3898	12581	12636	29146	29146					0.15458042430327623
PLHSADFSI	9	Unmodified	_PLHSADFSI_					0	0	0		OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant	OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant	OR4D9|p.F153Lfs*23|1|0.03|ENSG00000172742|chr11:59515361-59515362|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7515136599541	2	493.750724	985.486896	2.3317	0.0011513	-0.74083	-0.00036578	1.5909	0.00078549	493.750239225422	48.12	0.36701	50.097	49.899	50.266	1.9772					26	11	3	0	0	0	0.1735	1	20125	20125		36.044	0	1	2154700			25313	8045	12582	12637	29147	29147					-0.006428054821981277
PLHWVCKKVR	10	Unmodified	_PLHWVCKKVR_					0	0	0		ENSG00000139187|ENST00000356986|KLRG1;ENST00000538029.1_1_12:9102760-9162130:+|nuORF	ENSG00000139187|ENST00000356986|KLRG1	ENSG00000139187|ENST00000356986|KLRG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3706542849541	2	633.36861	1264.72267	2.3357	0.0014794	0.069317	4.3903E-05	2.405	0.0015233	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	0.89803	1	34514	34514		0.45834	0	1	11549000			25314	2868	12583	12638	29148	29148					0.1008942816142735
PLIKAQLLLA	10	Unmodified	_PLIKAQLLLA_					0	0	0			REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	REV__ENST00000360995.8_2_12:19615511-19615634:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3633911013603	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.313	1	25.998	25.498	26.498	1.6845								0	0	0	0.6624	1	10155	10155		0.40072	0	1		+		25315	12597	12584	12639	29149	29149					0.17520929338957103
PLIKILFEV	9	Unmodified	_PLIKILFEV_					0	0	0		tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3458129763603	2	536.344261	1070.67397	1.304	0.00069938	-0.27305	-0.00014645	1.0309	0.00055293	536.3441619598894	80.232	0.32446	81.948	81.726	82.05	1.7167					17	10	2	0	0	0	0.44062	1	33664	33664		25.399	2.663	1	1352300			25316	16511	12585	12640	29150	29150					0.14145838073318373
PLIKILFEV	9	Unmodified	_PLIKILFEV_					0	0	0		tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	tr|A0A553SQC3|A0A553SQC3_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_26435PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	536.344261	1070.67397	2.8863	0.0015481	0.13057	7.003E-05	3.0169	0.0016181	536.3441829701698	80.734	0.39075	81.967	81.711	82.102	1.2332	0.0093746	0.00022077	NaN	25.399	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1262700			25317	16511	12585	12640							0.14145838073318373
PLILDFMAQ	9	Unmodified	_PLILDFMAQ_					0	0	0			REV__tr|A0A553SKZ1|A0A553SKZ1_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_19630PE=3SV=1	REV__tr|A0A553SKZ1|A0A553SKZ1_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_19630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.2798950076103	2	524.280803	1046.54705	2.3611	0.0012379	-1.67	-0.00087555	0.69113	0.00036234	524.2797357056555	73.233	1.9071	73.558	72.579	74.486	0.32494					125	60	3	0	0	0	0.64949	1	30606	30606		9.3474	0	1	3222900	+		25318	14973	12586	12641	29151	29151					0.025641688566793164
PLINRRRFQQM	11	Unmodified	_PLINRRRFQQM_					0	0	0		nc|ENSG00000071054|O95819|MAP4K4;nc|ENSG00000071054|O95819-3|MAP4K4;ENSG00000071054|ENST00000324219|MAP4K4;nc|ENSG00000071054|O95819-4|MAP4K4;nc|ENSG00000071054|O95819-2|MAP4K4;nc|ENSG00000071054|O95819-5|MAP4K4;nc|ENSG00000071054|O95819-6|MAP4K4	nc|ENSG00000071054|O95819|MAP4K4	nc|ENSG00000071054|O95819|MAP4K4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	730.4134399294853	2	729.909162	1457.80377	3.564	0.0026014	-1.6101	-0.0011752	1.954	0.0014262	729.9078708898134	94.359	0.69218	95.101	94.826	95.519	0.74123					54	21	3	0	0	0	0.14606	1	39645	39645		3.2813	0	1	3523300			25319	864	12587	12642	29152	29152					0.09318084133519733
PLKFLLCAL	9	Unmodified	_PLKFLLCAL_					0	0	0			REV__ENST00000522067.1_1_1:233160928-233161282:-|nuORF	REV__ENST00000522067.1_1_1:233160928-233161282:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3184081912041	2	509.311906	1016.60926	2.1937	0.0011173	0.21784	0.00011095	2.4115	0.0012282	509.31182243893136	77.43	0.40853	77.747	77.511	77.92	0.31653					30	12	3	0	0	0	0.75267	1	32441	32441		5.2307	0	1	3493200	+		25320	13635	12588	12643	29153	29153					0.10161939995680314
PLKFLLCAL	9	Unmodified	_PLKFLLCAL_					0	0	0			REV__ENST00000522067.1_1_1:233160928-233161282:-|nuORF	REV__ENST00000522067.1_1_1:233160928-233161282:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	509.311906	1016.60926	2.027	0.0010324	-0.55279	-0.00028154	1.4742	0.00075083	509.31164630594265	77.614	0.37148	77.614	77.44	77.811	0	-0.17196	-0.00070209	NaN	5.2307	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3517500	+		25321	13635	12588	12643							0.10161939995680314
PLKFWERDY	9	Unmodified	_PLKFWERDY_					0	0	0		nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;ENSG00000197136|ENST00000355703|PCNX3	nc|ENSG00000197136|Q9H6A9-3|PCNX3	nc|ENSG00000197136|Q9H6A9-3|PCNX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	626.7731201052666	2	627.319306	1252.62406	1.6883	0.0010591	-3.047	-0.0019114	-1.3587	-0.00085234	627.8183126566536	67.948	0.18279	69.818	69.704	69.887	1.87					8	5	2	0	0	0	0.11463	1	28518	28518		4.3292	0.73274	1	297720			25322	4983	12589	12644	29154	29154					0.007851033973793164
PLKKAIAL	8	Unmodified	_PLKKAIAL_					0	0	0			REV__nc|ENSG00000111540|P61020-2|RAB5B	REV__nc|ENSG00000111540|P61020-2|RAB5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	853.5874511599541	1	853.586951	852.579674	1.2048	0.0010284	-1.9458	-0.0016609	-0.741	-0.00063251	853.5854215939673	109.1	1.0551	109.1	108.64	109.69	0					138	48	4	0	0	0	0.89176	5	47343	47080;47142;47207;47273;47343		0.79363	0	1	126920000	+		25323	9331	12590	12645	29155;29156;29157;29158;29159	29159					0.14748744041821737
PLKLKGKE	8	Unmodified	_PLKLKGKE_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	912.5911132693291	1	912.587679	911.580402	1.1255	0.0010271	1.611	0.0014702	2.7364	0.0024972	912.5893113381312	109.26	0.2042	109.26	109.15	109.35	0					20	8	3	0	0	0	0.89185	1	47213	47213		0	0	1	24856000	+		25324	15391	12591	12646	29160	29160					0.1210753869089558
PLKLKGKE	8	Unmodified	_PLKLKGKE_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	912.5922119021416	1	912.587679	911.580402	2.866	0.0026155	0.64338	0.00058714	3.5094	0.0032026	912.5881076572327	109.18	0.28734	109.34	109.21	109.5	0.15898					41	13	4	0	0	0	0.89185	1	47341	47341		0	0	1	164170000	+		25325	15391	12591	12646	29161	29161					0.1210753869089558
PLKLKGKE	8	Unmodified	_PLKLKGKE_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	912.587679	911.580402	1.1255	0.0010271	1.611	0.0014702	2.7364	0.0024972	912.5893113381312	109.26	0.2042	109.26	109.15	109.35	0	-0.039808	0.00087543	NaN	0	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24856000	+		25326	15391	12591	12646							0.1210753869089558
PLKLKGKE	8	Unmodified	_PLKLKGKE_					0	0	0			REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	REV__tr|A0A7D6VQT9|A0A7D6VQT9_9CLOTHemechaperoneHemWOS=ClostridiumintestinaleOX=36845GN=HZF06_16535PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	912.587679	911.580402	2.8143	0.0025683	0.84208	0.00076847	3.6564	0.0033368	912.588685303594	109.23	0.18741	109.28	109.17	109.36	0.048843	-0.027408	0.00017373	NaN	0	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12096000	+		25327	15391	12591	12646							0.1210753869089558
PLKNKLYKIY	10	Unmodified	_PLKNKLYKIY_					0	0	0			REV__tr|A0A553SIL2|A0A553SIL2_NIACIGlycosyltransferasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_15070PE=4SV=1	REV__tr|A0A553SIL2|A0A553SIL2_NIACIGlycosyltransferasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_15070PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.3955566287041	2	640.392273	1278.76999	1.8972	0.0012149	0.72756	0.00046593	2.6247	0.0016809	640.3926388126342	40.102	0.45569	41.412	41.269	41.725	1.3102					21	14	2	0	0	0	0.89803	1	16792	16792		1.6526	0.17072	1	1680100	+		25328	14855	12592	12647	29162	29162					0.14175985913402656
PLKQLTVL	8	Unmodified	_PLKQLTVL_					0	0	0		nc|ENSG00000161040|Q8NEE6-3|FBXL13;nc|ENSG00000161040|Q8NEE6-2|FBXL13;nc|ENSG00000161040|Q8NEE6|FBXL13;ENSG00000161040|ENST00000440067|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	911.5939208865166	1	911.59243	910.585153	2.8153	0.0025664	-0.2836	-0.00025853	2.5317	0.0023079	911.5918711763297	107.73	0.19949	107.78	107.68	107.88	0.052452					31	10	4	0	0	0	0.89176	2	46131	46131;46204		0.79363	0	1	198660000			25329	3588	12593	12648	29163;29164	29163					0.12628422833631703
PLKQLTVL	8	Unmodified	_PLKQLTVL_					0	0	0		nc|ENSG00000161040|Q8NEE6-3|FBXL13;nc|ENSG00000161040|Q8NEE6-2|FBXL13;nc|ENSG00000161040|Q8NEE6|FBXL13;ENSG00000161040|ENST00000440067|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	911.5940429568291	1	911.59243	910.585153	2.8375	0.0025866	-1.0486	-0.00095586	1.7889	0.0016308	911.5912891998875	107.71	0.21847	107.87	107.75	107.97	0.15781					41	11	5	0	0	0	0.89176	1	46360	46360		0.79363	0	1	2510100000			25330	3588	12593	12648	29165	29165					0.12628422833631703
PLKQLTVL	8	Unmodified	_PLKQLTVL_					0	0	0		nc|ENSG00000161040|Q8NEE6-3|FBXL13;nc|ENSG00000161040|Q8NEE6-2|FBXL13;nc|ENSG00000161040|Q8NEE6|FBXL13;ENSG00000161040|ENST00000440067|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	nc|ENSG00000161040|Q8NEE6-3|FBXL13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	911.5928222537041	1	911.59243	910.585153	3.1135	0.0028382	-1.9189	-0.0017492	1.1946	0.001089	911.5904500042433	107.68	0.23774	107.84	107.72	107.96	0.15795					43	12	5	0	0	0	0.89176	1	46367	46367		0.79363	0	1	2417500000			25331	3588	12593	12648	29166	29166					0.12628422833631703
PLKRLNRSR	9	Unmodified	_PLKRLNRSR_					0	0	0		ENSG00000140939|ENST00000568146|NOL3	ENSG00000140939|ENST00000568146|NOL3	ENSG00000140939|ENST00000568146|NOL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3600952029228	2	570.359631	1138.70471	1.7021	0.00097081	-0.0049737	-2.8368E-06	1.6971	0.00096797	570.3595417263331	80.932	0.40353	80.932	80.823	81.226	0					25	12	3	0	0	0	0.84963	1	33777	33777		0.6015	0	1	1688200			25332	2940	12594	12649	29167	29167					0.14090429230918744
PLKSFQKIQVR	11	Unmodified	_PLKSFQKIQVR_					0	0	0		ENST00000415804.2_1_4:4508806-4509291:+|nuORF	ENST00000415804.2_1_4:4508806-4509291:+|nuORF	ENST00000415804.2_1_4:4508806-4509291:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4131957888603	2	672.411529	1342.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.689	1	84.359	83.859	84.859	1.67								0	0	0	0.63775	1	34688	34688		0	0	1				25333	6403	12595	12650	29168	29168					0.15081291547903675
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2715637087822	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.39	1	105.39	104.89	105.89	0								0	0	0	0.42693	1	44725	44725		0.26902	0.033176	1		+		25334	8496	12596	12651	29169	29169					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2719604372978	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.67	1	105.67	105.17	106.17	0								0	0	0	0.42693	1	44908	44908		0.26902	0.033176	1		+		25335	8496	12596	12651	29170	29170					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2709838747978	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.34	1	105.4	104.9	105.9	0.056801								0	0	0	0.42693	1	44637	44637		0.26902	0.033176	1		+		25336	8496	12596	12651	29171	29171					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2722045779228	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.58	1	105.63	105.13	106.13	0.05455								0	0	0	0.42693	1	44796	44796		0.26902	0.033176	1		+		25337	8496	12596	12651	29172	29172					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2711974978447	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.69	1	105.74	105.24	106.24	0.05455								0	0	0	0.42693	1	44873	44873		0.26902	0.033176	1		+		25338	8496	12596	12651	29173	29173					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2715942263603	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.97	1	106.02	105.52	106.52	0.05455								0	0	0	0.42693	1	45055	45055		0.26902	0.033176	1		+		25339	8496	12596	12651	29174	29174					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2713806033134	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.32	1	106.37	105.87	106.87	0.05455								0	0	0	0.42693	1	45275	45275		0.26902	0.033176	1		+		25340	8496	12596	12651	29175	29175					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2716247439384	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.42	1	106.48	105.98	106.98	0.05455								0	0	0	0.42693	1	45339	45339		0.26902	0.033176	1		+		25341	8496	12596	12651	29176	29176					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2711669802666	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.89	1	106.94	106.44	107.44	0.052452								0	0	0	0.42693	1	45625	45625		0.26902	0.033176	1		+		25342	8496	12596	12651	29177	29177					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2714111208916	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.29	1	105.46	104.96	105.96	0.16679								0	0	0	0.42693	1	44752	44752		0.26902	0.033176	1		+		25343	8496	12596	12651	29178	29178					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2715942263603	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.42	1	105.59	105.09	106.09	0.16679								0	0	0	0.42693	1	44837	44837		0.26902	0.033176	1		+		25344	8496	12596	12651	29179	29179					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2718383669853	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.53	1	105.7	105.2	106.2	0.16679								0	0	0	0.42693	1	44909	44909		0.26902	0.033176	1		+		25345	8496	12596	12651	29180	29180					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2716857790947	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.64	1	105.81	105.31	106.31	0.16679								0	0	0	0.42693	1	44983	44983		0.26902	0.033176	1		+		25346	8496	12596	12651	29181	29181					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2709533572197	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.87	1	106.04	105.54	106.54	0.16679								0	0	0	0.42693	1	45141	45141		0.26902	0.033176	1		+		25347	8496	12596	12651	29182	29182					0.21732469541416322
PLKVLRKRR	9	Unmodified	_PLKVLRKRR_					0	0	0			REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	REV__ENST00000494268.1_1_X:11778342-11782058:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2699767947197	3	389.271653	1164.79313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.97	1	106.14	105.64	106.64	0.16321								0	0	0	0.42693	1	45206	45206		0.26902	0.033176	1		+		25348	8496	12596	12651	29183	29183					0.21732469541416322
PLKVSVRLQ	9	Unmodified	_PLKVSVRLQ_					0	0	0		tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	tr|A0A7D6VQJ5|A0A7D6VQJ5_9CLOTDNA-directedRNApolymerasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=rpoBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2258178591728	3	347.225598	1038.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.032	1	51.361	50.861	51.861	0.32824								0	0	0	0.42693	1	21379	21379		1.1933	0.92432	1				25349	16800	12597	12652	29184	29184					0.13718301502285613
PLLAAAIN	8	Unmodified	_PLLAAAIN_					0	0	0			REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.7406188845634	2	391.742171	781.469789	0.21709	8.5043E-05	-2.9576	-0.0011586	-2.7405	-0.0010736	391.7407031817206	63.817	1.2871	63.817	63.24	64.527	0					54	40	2	0	0	0	0.89176	1	26610	26610		0.79363	0	1	4876600	+		25350	9885	12598	12653	29185	29185					0.070313187026386
PLLAAAIN	8	Unmodified	_PLLAAAIN_					0	0	0			REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	REV__ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.7414733767509	2	391.742171	781.469789	1.919	0.00075177	-3.0807	-0.0012069	-1.1617	-0.00045508	391.74038905137934	63.625	1.3107	63.954	63.38	64.691	0.32899					79	41	3	0	0	0	0.89176	1	26582	26582		0.79363	0	1	6378200	+		25351	9885	12598	12653	29186	29186					0.070313187026386
PLLAILFHL	9	Unmodified	_PLLAILFHL_					0	0	0			REV__ENST00000227507.2_1_11:69467885-69468137:+|nuORF	REV__ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2229492068291	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.746	1	88.969	88.469	89.469	0.22359								0	0	0	0.42693	1	37207	37207		0.26902	0	1		+		25352	12093	12599	12654	29187	29187					0.13168988621691824
PLLALANG	8	Unmodified	_PLLALANG_					0	0	0		chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	768.4604980349541	1	768.461416	767.454139	2.4376	0.0018732	-3.4777	-0.0026725	-1.0401	-0.00079929	768.4589210350624	73.756	0.4314	75.552	75.286	75.717	1.7962					17	13	2	0	0	0	0.89008	1	30946	30946		2.5775	0	1	1507600			25353	185	12600	12655	29188	29188					0.06111032185594922
PLLALANG	8	Unmodified	_PLLALANG_					0	0	0		chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	768.461416	767.454139	1.9674	0.0015119	-4.0136	-0.0030843	-2.0462	-0.0015724	768.458368942394	75.263	0.41173	75.263	75.059	75.471	0	-0.13958	-0.00019861	NaN	2.5775	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1998000			25354	185	12600	12655							0.06111032185594922
PLLALANG	8	Unmodified	_PLLALANG_					0	0	0		chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	768.461416	767.454139	2.531	0.001945	-4.1052	-0.0031547	-1.5742	-0.0012097	768.458237841957	75.023	0.44039	75.348	75.143	75.584	0.32464	-0.054602	-0.00026904	NaN	2.5775	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1972200			25355	185	12600	12655							0.06111032185594922
PLLALANG	8	Unmodified	_PLLALANG_					0	0	0		chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	chr11:2915256-2916622|162|16.46|0.92|4.16|+|1|None,SLC22A18|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	768.461416	767.454139	2.8482	0.0021888	-3.1638	-0.0024312	-0.31551	-0.00024246	768.458850696206	74.129	0.46581	75.447	75.125	75.591	1.318	0.044521	0.00045443	NaN	2.5775	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1352300			25356	185	12600	12655							0.06111032185594922
PLLAMGPPRVL	11	Unmodified	_PLLAMGPPRVL_					0	0	0			REV__ENST00000431601.5_1_3:39148536-39148707:-|nuORF	REV__ENST00000431601.5_1_3:39148536-39148707:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3561889529228	2	582.352094	1162.68964	4.5577	0.0026542	2.0827	0.0012129	6.6404	0.0038671	582.3530870219631	89.316	0.53099	90.72	90.488	91.019	1.4045					52	16	4	0	0	0	1.0357	1	37573	37573		1.4819	1.0236	1	29001000	+		25357	13030	12601	12656	29189	29189					0.11479801318728278
PLLCASPLLL	10	Carbamidomethyl (C)	_PLLC(Carbamidomethyl (C))ASPLLL_	PLLC(1)ASPLLL		PLLC(67)ASPLLL		0	1	0			REV__ENST00000585357.1_1_19:38780610-38781349:+|nuORF	REV__ENST00000585357.1_1_19:38780610-38781349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8243896365166	2	548.825378	1095.6362	1.1656	0.00063972	-1.2436	-0.00068254	-0.07802	-4.2819E-05	548.8243732170494	67.256	0.52142	69.145	68.828	69.35	1.8889					35	16	3	0	0	0	0.081078	1	28231	28231		67.344	8.665	1	2495300	+		25358	14019	12602	12657	29190	29190	25				0.09221003816196571
PLLDLIYPP	9	Unmodified	_PLLDLIYPP_					0	0	0			REV__ENSG00000110395|ENST00000264033|CBL	REV__ENSG00000110395|ENST00000264033|CBL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3058959841728	2	520.804968	1039.59538	5.9592	0.0031036	2.2694	0.0011819	8.2286	0.0042855	520.8061960974296	88.759	1.1264	89.815	89.113	90.239	1.0562					59	34	2	0	0	0	0.54523	1	37199	37199		13.508	0	1	5773900	+		25359	9298	12603	12658	29191	29191					0.07716985768229279
PLLEGKQTK	9	Unmodified	_PLLEGKQTK_					0	0	0			REV__ENSG00000108021|ENST00000695737|TASOR2	REV__ENSG00000108021|ENST00000695737|TASOR2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.7154113650322	3	338.537842	1012.5917	-2.1198	-0.00071762	2.6991	0.00091374	0.57932	0.00019612	338.5383946783454	28.695	0.48897	28.695	28.473	28.962	0					19	15	2	0	0	0	0.097511	1	11948	11948		16.149	9.4259	1	409340	+		25360	9244	12604	12659	29192	29192					0.0859031599438822
PLLEVWQVF	9	Unmodified	_PLLEVWQVF_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8202392458916	2	565.815867	1129.61718	3.6185	0.0020474	2.5554	0.0014459	6.1738	0.0034933	565.8175286991071	82.048	0.28345	83.719	83.639	83.923	1.67					9	8	2	0	0	0	0.51832	1	34433	34433		14.582	5.2343	1	666200	+		25361	8464	12605	12660	29193	29193					0.05755790516809611
PLLFPISS	8	Unmodified	_PLLFPISS_					0	0	0			REV__ENST00000064778.8_1_11:73117469-73117643:-|nuORF	REV__ENST00000064778.8_1_11:73117469-73117643:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2578002810478	2	437.257654	872.500755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.253	1	81.253	80.753	81.753	0								0	0	0	1.0178	1	33835	33835		2.5775	0	1		+		25362	12041	12606	12661	29194	29194					0.05940472016891363
PLLGFRRRL	9	Unmodified	_PLLGFRRRL_					0	0	0			REV__ENST00000281543.5_1_4:44680449-44680617:+|nuORF	REV__ENST00000281543.5_1_4:44680449-44680617:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3596679568291	2	564.361642	1126.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.15	1	50.127	49.627	50.627	1.9772								0	0	0	0.42693	1	20167	20167		5.2307	0	1		+		25363	12253	12607	12662	29195	29195					0.15044518724653244
PLLGVIFA	8	Unmodified	_PLLGVIFA_					0	0	0			REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2619506716728	2	415.262739	828.510926	1.3971	0.00058016	-1.8217	-0.0007565	-0.42465	-0.00017634	415.261839881961	84.181	0.44069	85.369	85.115	85.556	1.1879					23	14	2	0	0	0	0.89176	1	35291	35291		0.79363	0	1	2683000	+		25364	10172	12608	12663	29196	29196					0.08981079742113707
PLLIFLSQL	9	Unmodified	_PLLIFLSQL_					0	0	0			REV__ENST00000262126.8_1_18:9283072-9283150:+|nuORF	REV__ENST00000262126.8_1_18:9283072-9283150:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3283569216728	2	522.328611	1042.64267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.48	1	98.48	97.98	98.98	0								0	0	0	0.04443	1	41182	41182		50.855	0	1		+		25365	12192	12609	12664	29197	29197					0.12305265039231017
PLLIWLTK	8	Unmodified	_PLLIWLTK_					0	0	0			REV__tr|A0A553SUB7|A0A553SUB7_NIACIABC-2transporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_06715PE=4SV=1	REV__tr|A0A553SUB7|A0A553SUB7_NIACIABC-2transporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_06715PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.3179809451103	2	492.318046	982.621539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.07	103.57	104.57	0								0	0	0	1.0178	1	43855	43855		2.3027	0	1		+		25366	15286	12610	12665	29198	29198					0.12953299730372692
PLLKPLKIII	10	Unmodified	_PLLKPLKIII_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2758972048759	3	383.277411	1146.8104	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.59	1	108.75	108.25	109.25	0.15898								0	0	0	0.66264	1	46990	46990		0	0	1				25367	7795	12611	12666	29199	29199					0.24286952303828002
PLLKPLKIII	10	Unmodified	_PLLKPLKIII_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2762328982353	3	383.277411	1146.8104	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.7	1	108.86	108.36	109.36	0.15898								0	0	0	0.66264	1	47054	47054		0	0	1				25368	7795	12611	12666	29200	29200					0.24286952303828002
PLLKPLKIII	10	Unmodified	_PLLKPLKIII_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2769653201103	3	383.277411	1146.8104	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.82	1	108.98	108.48	109.48	0.15898								0	0	0	0.66264	1	47134	47134		0	0	1				25369	7795	12611	12666	29201	29201					0.24286952303828002
PLLKPLKIII	10	Unmodified	_PLLKPLKIII_					0	0	0		MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|18|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2789184451103	3	383.277411	1146.8104	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.17	1	110.33	109.83	110.83	0.16133								0	0	0	0.66264	1	47864	47864		0	0	1				25370	7795	12611	12666	29202	29202					0.24286952303828002
PLLLDERAKL	10	Unmodified	_PLLLDERAKL_					0	0	0			REV__ENST00000538526.5_3_12:109697932-109704164:+|nuORF	REV__ENST00000538526.5_3_12:109697932-109704164:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3591796755791	2	584.358431	1166.70231	2.8591	0.0016707	-3.3279	-0.0019447	-0.46876	-0.00027393	584.3564830012283	74.225	0.87592	76.021	75.869	76.745	1.7962					48	27	3	0	0	0	0.846	1	31403	31403		7.2892	0.56607	1	1865600	+		25371	8771	12612	12667	29203	29203					0.1256253598260173
PLLLHIELL	9	Unmodified	_PLLLHIELL_					0	0	0			REV__ENST00000436656.5_1_1:173834433-173834484:-|nuORF	REV__ENST00000436656.5_1_1:173834433-173834484:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8448364138603	2	530.841885	1059.66922	5.025	0.0026675	3.7584	0.0019951	8.7834	0.0046626	530.8422370148778	87.822	0.69798	88.914	88.674	89.372	1.0918					27	21	2	0	0	0	0.39097	1	37030	37030		20.871	6.2895	1	1797700	+		25372	13055	12613	12668	29204	29204					0.14176953930564196
PLLLHIELL	9	Unmodified	_PLLLHIELL_					0	0	0			REV__ENST00000436656.5_1_1:173834433-173834484:-|nuORF	REV__ENST00000436656.5_1_1:173834433-173834484:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8447753787041	2	530.841885	1059.66922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.334	1	88.829	88.329	89.329	1.4953								0	0	0	0.341	1	36820	36820		14.582	2.0501	1		+		25373	13055	12613	12668	29205	29205					0.14176953930564196
PLLLLLLLM	9	Unmodified	_PLLLLLLLM_					0	0	0			REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	REV__nc|ENSG00000105366|Q9NYZ4-2|SIGLEC8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1423217654228	2	519.853407	1037.69226	1.4643	0.0007612	-0.10533	-5.4754E-05	1.3589	0.00070645	519.8536832943064	101.17	0.084778	101.17	101.12	101.2	0					4	2	2	0	0	0	0.11957	1	42338	42338		0	0	1	3087200	+		25374	9168	12614	12669	29206	29206					0.17492256723653554
PLLLLLLVPS	10	Unmodified	_PLLLLLLVPS_					0	0	0		nc|ENSG00000050393|Q96AQ8-2|MCUR1;ENSG00000050393|ENST00000379170|MCUR1	nc|ENSG00000050393|Q96AQ8-2|MCUR1	nc|ENSG00000050393|Q96AQ8-2|MCUR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3679077029228	2	539.367736	1076.72092	2.7852	0.0015023	-3.5059	-0.001891	-0.72069	-0.00038871	539.3657525559325	107.58	0.23155	107.63	107.5	107.73	0.052452					44	11	5	0	0	0	0.89803	1	46017	46017		1.6526	0	1	671780000			25375	700	12615	12670	29207	29207					0.18562697624452085
PLLLLLML	8	Unmodified	_PLLLLLML_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10;chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1;tr|A0A7D6ZY69|A0A7D6ZY69_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02085PE=4SV=1;nc|ENSG00000162729|Q969P0-3|IGSF8;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	463.3138305544853	2	463.311375	924.608197	3.5271	0.0016342	-0.59872	-0.00027739	2.9284	0.0013568	463.3109205430467	109.57	0.65416	109.72	109.44	110.09	0.1548					44	24	3	0	0	0	0.89198	1	47562	47562		0	0	1	4033100			25376	511;3642	12616	12671	29208	29208					0.1428772562675249
PLLLLLML	8	Unmodified	_PLLLLLML_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10;chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1;tr|A0A7D6ZY69|A0A7D6ZY69_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02085PE=4SV=1;nc|ENSG00000162729|Q969P0-3|IGSF8;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	463.311375	924.608197	1.4942	0.00069226	-1.9103	-0.00088508	-0.41617	-0.00019281	463.3106065101973	109.65	0.77613	109.65	109.3	110.08	0	-0.05154	-0.00011148	NaN	0	59	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4955400			25377	511;3642	12616	12671							0.1428772562675249
PLLLLLML	8	Unmodified	_PLLLLLML_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10;chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1;tr|A0A7D6ZY69|A0A7D6ZY69_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02085PE=4SV=1;nc|ENSG00000162729|Q969P0-3|IGSF8;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	463.311375	924.608197	3.4136	0.0015816	-3.5666	-0.0016525	-0.15298	-7.0878E-05	463.30995841154527	109.64	0.63112	109.69	109.48	110.11	0.048843	-0.0091578	-0.0016462	NaN	0	43	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4581700			25378	511;3642	12616	12671							0.1428772562675249
PLLLLLML	8	Unmodified	_PLLLLLML_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10;chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1;tr|A0A7D6ZY69|A0A7D6ZY69_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02085PE=4SV=1;nc|ENSG00000162729|Q969P0-3|IGSF8;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10;ENSG00000162729|ENST00000314485|IGSF8	nc|ENSG00000006695|Q12887-2|COX10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	463.311375	924.608197	3.3608	0.0015571	-0.38519	-0.00017846	2.9756	0.0013786	463.31127514241797	109.58	0.69641	109.74	109.5	110.2	0.15899	0.039654	0.0013017	NaN	0	43	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3835100			25379	511;3642	12616	12671							0.1428772562675249
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538940310478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.113	1	66.113	65.613	66.613	0								0	0	0	0.66264	1	27544	27544		0	0	1				25380	280	12617	12672	29209	29209					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.307	1	66.307	65.807	66.807	0								0	0	0	0.66264	1	27622	27622		0	0	1				25381	280	12617	12672	29210	29210					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.44	1	66.44	65.94	66.94	0								0	0	0	0.66264	1	27675	27675		0	0	1				25382	280	12617	12672	29211	29211					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.627	1	66.627	66.127	67.127	0								0	0	0	0.66264	1	27751	27751		0	0	1				25383	280	12617	12672	29212	29212					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.721	1	66.721	66.221	67.221	0								0	0	0	0.66264	1	27790	27790		0	0	1				25384	280	12617	12672	29213	29213					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.823	1	66.823	66.323	67.323	0								0	0	0	0.66264	1	27832	27832		0	0	1				25385	280	12617	12672	29214	29214					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531310915947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.041	1	67.041	66.541	67.541	0								0	0	0	0.66264	1	27920	27920		0	0	1				25386	280	12617	12672	29215	29215					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2527038455009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.147	1	67.147	66.647	67.647	0								0	0	0	0.66264	1	27966	27966		0	0	1				25387	280	12617	12672	29216	29216					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2527343630791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.259	1	67.259	66.759	67.759	0								0	0	0	0.66264	1	28015	28015		0	0	1				25388	280	12617	12672	29217	29217					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.372	1	67.372	66.872	67.872	0								0	0	0	0.66264	1	28063	28063		0	0	1				25389	280	12617	12672	29218	29218					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.5	1	67.5	67	68	0								0	0	0	0.66264	1	28116	28116		0	0	1				25390	280	12617	12672	29219	29219					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531616091728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.72	1	67.72	67.22	68.22	0								0	0	0	0.66264	1	28206	28206		0	0	1				25391	280	12617	12672	29220	29220					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.943	1	67.943	67.443	68.443	0								0	0	0	0.66264	1	28297	28297		0	0	1				25392	280	12617	12672	29221	29221					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.156	1	68.156	67.656	68.656	0								0	0	0	0.66264	1	28385	28385		0	0	1				25393	280	12617	12672	29222	29222					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.258	1	68.258	67.758	68.758	0								0	0	0	0.66264	1	28427	28427		0	0	1				25394	280	12617	12672	29223	29223					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.381	1	68.381	67.881	68.881	0								0	0	0	0.66264	1	28478	28478		0	0	1				25395	280	12617	12672	29224	29224					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.475	1	68.475	67.975	68.975	0								0	0	0	0.66264	1	28516	28516		0	0	1				25396	280	12617	12672	29225	29225					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.572	1	68.572	68.072	69.072	0								0	0	0	0.66264	1	28556	28556		0	0	1				25397	280	12617	12672	29226	29226					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.697	1	68.697	68.197	69.197	0								0	0	0	0.66264	1	28608	28608		0	0	1				25398	280	12617	12672	29227	29227					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533141970634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.882	1	68.882	68.382	69.382	0								0	0	0	0.66264	1	28685	28685		0	0	1				25399	280	12617	12672	29228	29228					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.103	1	69.103	68.603	69.603	0								0	0	0	0.66264	1	28778	28778		0	0	1				25400	280	12617	12672	29229	29229					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.225	1	69.225	68.725	69.725	0								0	0	0	0.66264	1	28829	28829		0	0	1				25401	280	12617	12672	29230	29230					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.352	1	69.352	68.852	69.852	0								0	0	0	0.66264	1	28882	28882		0	0	1				25402	280	12617	12672	29231	29231					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.474	1	69.474	68.974	69.974	0								0	0	0	0.66264	1	28933	28933		0	0	1				25403	280	12617	12672	29232	29232					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.57	1	69.57	69.07	70.07	0								0	0	0	0.66264	1	28972	28972		0	0	1				25404	280	12617	12672	29233	29233					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.664	1	69.664	69.164	70.164	0								0	0	0	0.66264	1	29010	29010		0	0	1				25405	280	12617	12672	29234	29234					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.76	1	69.76	69.26	70.26	0								0	0	0	0.66264	1	29049	29049		0	0	1				25406	280	12617	12672	29235	29235					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.042	1	70.042	69.542	70.542	0								0	0	0	0.66264	1	29165	29165		0	0	1				25407	280	12617	12672	29236	29236					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2525207400322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.386	1	70.386	69.886	70.886	0								0	0	0	0.66264	1	29311	29311		0	0	1				25408	280	12617	12672	29237	29237					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2523681521416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.5	1	70.5	70	71	0								0	0	0	0.66264	1	29362	29362		0	0	1				25409	280	12617	12672	29238	29238					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.121	1	71.121	70.621	71.621	0								0	0	0	0.66264	1	29621	29621		0	0	1				25410	280	12617	12672	29239	29239					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531310915947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.31	1	71.31	70.81	71.81	0								0	0	0	0.66264	1	29698	29698		0	0	1				25411	280	12617	12672	29240	29240					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.403	1	71.403	70.903	71.903	0								0	0	0	0.66264	1	29737	29737		0	0	1				25412	280	12617	12672	29241	29241					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.628	1	71.628	71.128	72.128	0								0	0	0	0.66264	1	29829	29829		0	0	1				25413	280	12617	12672	29242	29242					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.012	1	72.012	71.512	72.512	0								0	0	0	0.66264	1	29987	29987		0	0	1				25414	280	12617	12672	29243	29243					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.135	1	72.135	71.635	72.635	0								0	0	0	0.66264	1	30038	30038		0	0	1				25415	280	12617	12672	29244	29244					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.233	1	72.233	71.733	72.733	0								0	0	0	0.66264	1	30078	30078		0	0	1				25416	280	12617	12672	29245	29245					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539245486259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.356	1	72.356	71.856	72.856	0								0	0	0	0.66264	1	30128	30128		0	0	1				25417	280	12617	12672	29246	29246					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.45	1	72.45	71.95	72.95	0								0	0	0	0.66264	1	30166	30166		0	0	1				25418	280	12617	12672	29247	29247					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535888552666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.545	1	72.545	72.045	73.045	0								0	0	0	0.66264	1	30205	30205		0	0	1				25419	280	12617	12672	29248	29248					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535888552666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.639	1	72.639	72.139	73.139	0								0	0	0	0.66254	1	30243	30243		0.15932	0	1				25420	280	12617	12672	29249	29249					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.736	1	72.736	72.236	73.236	0								0	0	0	0.66264	1	30284	30284		0	0	1				25421	280	12617	12672	29250	29250					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531616091728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.926	1	72.926	72.426	73.426	0								0	0	0	0.66264	1	30363	30363		0	0	1				25422	280	12617	12672	29251	29251					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529174685478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.05	1	73.05	72.55	73.55	0								0	0	0	0.66264	1	30414	30414		0	0	1				25423	280	12617	12672	29252	29252					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529785037041	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.144	1	73.144	72.644	73.644	0								0	0	0	0.66264	1	30453	30453		0	0	1				25424	280	12617	12672	29253	29253					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.242	1	73.242	72.742	73.742	0								0	0	0	0.66264	1	30493	30493		0	0	1				25425	280	12617	12672	29254	29254					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529479861259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.483	1	73.483	72.983	73.983	0								0	0	0	0.66264	1	30596	30596		0	0	1				25426	280	12617	12672	29255	29255					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.727	1	73.727	73.227	74.227	0								0	0	0	0.66264	1	30701	30701		0	0	1				25427	280	12617	12672	29256	29256					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.852	1	73.852	73.352	74.352	0								0	0	0	0.66264	1	30754	30754		0	0	1				25428	280	12617	12672	29257	29257					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.976	1	73.976	73.476	74.476	0								0	0	0	0.66264	1	30805	30805		0	0	1				25429	280	12617	12672	29258	29258					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.068	1	74.068	73.568	74.568	0								0	0	0	0.66264	1	30842	30842		0	0	1				25430	280	12617	12672	29259	29259					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.164	1	74.164	73.664	74.664	0								0	0	0	0.66264	1	30882	30882		0	0	1				25431	280	12617	12672	29260	29260					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.26	1	74.26	73.76	74.76	0								0	0	0	0.66264	1	30920	30920		0	0	1				25432	280	12617	12672	29261	29261					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.356	1	74.356	73.856	74.856	0								0	0	0	0.66264	1	30959	30959		0	0	1				25433	280	12617	12672	29262	29262					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.452	1	74.452	73.952	74.952	0								0	0	0	0.66264	1	30998	30998		0	0	1				25434	280	12617	12672	29263	29263					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.644	1	74.644	74.144	75.144	0								0	0	0	0.66264	1	31077	31077		0	0	1				25435	280	12617	12672	29264	29264					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.772	1	74.772	74.272	75.272	0								0	0	0	0.66264	1	31130	31130		0	0	1				25436	280	12617	12672	29265	29265					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.899	1	74.899	74.399	75.399	0								0	0	0	0.66264	1	31183	31183		0	0	1				25437	280	12617	12672	29266	29266					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.021	1	75.021	74.521	75.521	0								0	0	0	0.66264	1	31234	31234		0	0	1				25438	280	12617	12672	29267	29267					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535888552666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.147	1	75.147	74.647	75.647	0								0	0	0	0.66264	1	31286	31286		0	0	1				25439	280	12617	12672	29268	29268					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.364	1	75.364	74.864	75.864	0								0	0	0	0.66264	1	31375	31375		0	0	1				25440	280	12617	12672	29269	29269					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.562	1	75.562	75.062	76.062	0								0	0	0	0.66264	1	31456	31456		0	0	1				25441	280	12617	12672	29270	29270					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.685	1	75.685	75.185	76.185	0								0	0	0	0.66264	1	31507	31507		0	0	1				25442	280	12617	12672	29271	29271					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.004	1	76.004	75.504	76.504	0								0	0	0	0.66264	1	31637	31637		0	0	1				25443	280	12617	12672	29272	29272					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.134	1	76.134	75.634	76.634	0								0	0	0	0.66264	1	31692	31692		0	0	1				25444	280	12617	12672	29273	29273					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2529174685478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.255	1	76.255	75.755	76.755	0								0	0	0	0.66254	1	31745	31745		0.15932	0	1				25445	280	12617	12672	29274	29274					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2527953982353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.375	1	76.375	75.875	76.875	0								0	0	0	0.66264	1	31797	31797		0	0	1				25446	280	12617	12672	29275	29275					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.682	1	76.682	76.182	77.182	0								0	0	0	0.66264	1	31923	31923		0	0	1				25447	280	12617	12672	29276	29276					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.801	1	76.801	76.301	77.301	0								0	0	0	0.66264	1	31972	31972		0	0	1				25448	280	12617	12672	29277	29277					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.898	1	76.898	76.398	77.398	0								0	0	0	0.66264	1	32012	32012		0	0	1				25449	280	12617	12672	29278	29278					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.993	1	76.993	76.493	77.493	0								0	0	0	0.66264	1	32052	32052		0	0	1				25450	280	12617	12672	29279	29279					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.118	1	77.118	76.618	77.618	0								0	0	0	0.66264	1	32104	32104		0	0	1				25451	280	12617	12672	29280	29280					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.21	1	77.21	76.71	77.71	0								0	0	0	0.66264	1	32142	32142		0	0	1				25452	280	12617	12672	29281	29281					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538329958916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.309	1	77.309	76.809	77.809	0								0	0	0	0.66264	1	32183	32183		0	0	1				25453	280	12617	12672	29282	29282					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.43	1	77.43	76.93	77.93	0								0	0	0	0.66264	1	32234	32234		0	0	1				25454	280	12617	12672	29283	29283					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.534	1	77.534	77.034	78.034	0								0	0	0	0.66264	1	32277	32277		0	0	1				25455	280	12617	12672	29284	29284					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.659	1	77.659	77.159	78.159	0								0	0	0	0.66254	1	32329	32329		0.15932	0	1				25456	280	12617	12672	29285	29285					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.774	1	77.774	77.274	78.274	0								0	0	0	0.66254	1	32378	32378		0.15932	0	1				25457	280	12617	12672	29286	29286					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.086	1	78.086	77.586	78.586	0								0	0	0	0.66264	1	32507	32507		0	0	1				25458	280	12617	12672	29287	29287					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.178	1	78.178	77.678	78.678	0								0	0	0	0.66264	1	32545	32545		0	0	1				25459	280	12617	12672	29288	29288					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.274	1	78.274	77.774	78.774	0								0	0	0	0.66264	1	32585	32585		0	0	1				25460	280	12617	12672	29289	29289					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2544128298759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.496	1	84.496	83.996	84.996	0								0	0	0	0.66264	1	35213	35213		0	0	1				25461	280	12617	12672	29290	29290					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539550662041	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.61	1	84.61	84.11	85.11	0								0	0	0	0.66264	1	35258	35258		0	0	1				25462	280	12617	12672	29291	29291					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.704	1	84.704	84.204	85.204	0								0	0	0	0.66264	1	35297	35297		0	0	1				25463	280	12617	12672	29292	29292					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538329958916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.8	1	84.8	84.3	85.3	0								0	0	0	0.66264	1	35336	35336		0	0	1				25464	280	12617	12672	29293	29293					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.898	1	84.898	84.398	85.398	0								0	0	0	0.66264	1	35376	35376		0	0	1				25465	280	12617	12672	29294	29294					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540161013603	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.992	1	84.992	84.492	85.492	0								0	0	0	0.66264	1	35415	35415		0	0	1				25466	280	12617	12672	29295	29295					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.088	1	85.088	84.588	85.588	0								0	0	0	0.66264	1	35454	35454		0	0	1				25467	280	12617	12672	29296	29296					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.185	1	85.185	84.685	85.685	0								0	0	0	0.66264	1	35492	35492		0	0	1				25468	280	12617	12672	29297	29297					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.286	1	85.286	84.786	85.786	0								0	0	0	0.66264	1	35534	35534		0	0	1				25469	280	12617	12672	29298	29298					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.408	1	85.408	84.908	85.908	0								0	0	0	0.66264	1	35585	35585		0	0	1				25470	280	12617	12672	29299	29299					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.622	1	85.622	85.122	86.122	0								0	0	0	0.66264	1	35675	35675		0	0	1				25471	280	12617	12672	29300	29300					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.726	1	85.726	85.226	86.226	0								0	0	0	0.66264	1	35718	35718		0	0	1				25472	280	12617	12672	29301	29301					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.848	1	85.848	85.348	86.348	0								0	0	0	0.66264	1	35769	35769		0	0	1				25473	280	12617	12672	29302	29302					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.969	1	85.969	85.469	86.469	0								0	0	0	0.66264	1	35819	35819		0	0	1				25474	280	12617	12672	29303	29303					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.064	1	86.064	85.564	86.564	0								0	0	0	0.66264	1	35859	35859		0	0	1				25475	280	12617	12672	29304	29304					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.37	1	86.37	85.87	86.87	0								0	0	0	0.66264	1	35994	35994		0	0	1				25476	280	12617	12672	29305	29305					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541686892509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.482	1	86.482	85.982	86.982	0								0	0	0	0.66264	1	36041	36041		0	0	1				25477	280	12617	12672	29306	29306					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.694	1	87.694	87.194	88.194	0								0	0	0	0.66264	1	36652	36652		0	0	1				25478	280	12617	12672	29307	29307					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.935	1	87.935	87.435	88.435	0								0	0	0	0.66264	1	36758	36758		0	0	1				25479	280	12617	12672	29308	29308					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539245486259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.055	1	88.055	87.555	88.555	0								0	0	0	0.66264	1	36810	36810		0	0	1				25480	280	12617	12672	29309	29309					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539855837822	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.175	1	88.175	87.675	88.675	0								0	0	0	0.66264	1	36861	36861		0	0	1				25481	280	12617	12672	29310	29310					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.295	1	88.295	87.795	88.795	0								0	0	0	0.66264	1	36911	36911		0	0	1				25482	280	12617	12672	29311	29311					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.417	1	88.417	87.917	88.917	0								0	0	0	0.66264	1	36964	36964		0	0	1				25483	280	12617	12672	29312	29312					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.538	1	88.538	88.038	89.038	0								0	0	0	0.66264	1	37017	37017		0	0	1				25484	280	12617	12672	29313	29313					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2542297244072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.659	1	88.659	88.159	89.159	0								0	0	0	0.66264	1	37067	37067		0	0	1				25485	280	12617	12672	29314	29314					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2542297244072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.852	1	88.852	88.352	89.352	0								0	0	0	0.66264	1	37145	37145		0	0	1				25486	280	12617	12672	29315	29315					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.974	1	88.974	88.474	89.474	0								0	0	0	0.66264	1	37195	37195		0	0	1				25487	280	12617	12672	29316	29316					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.069	1	89.069	88.569	89.569	0								0	0	0	0.66264	1	37234	37234		0	0	1				25488	280	12617	12672	29317	29317					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.165	1	89.165	88.665	89.665	0								0	0	0	0.66264	1	37273	37273		0	0	1				25489	280	12617	12672	29318	29318					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539855837822	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.264	1	89.264	88.764	89.764	0								0	0	0	0.66264	1	37313	37313		0	0	1				25490	280	12617	12672	29319	29319					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538329958916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.363	1	89.363	88.863	89.863	0								0	0	0	0.66264	1	37354	37354		0	0	1				25491	280	12617	12672	29320	29320					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.494	1	89.494	88.994	89.994	0								0	0	0	0.66264	1	37409	37409		0	0	1				25492	280	12617	12672	29321	29321					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2545349001884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.617	1	89.617	89.117	90.117	0								0	0	0	0.66264	1	37459	37459		0	0	1				25493	280	12617	12672	29322	29322					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.733	1	89.733	89.233	90.233	0								0	0	0	0.66264	1	37507	37507		0	0	1				25494	280	12617	12672	29323	29323					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538940310478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.925	1	89.925	89.425	90.425	0								0	0	0	0.66264	1	37585	37585		0	0	1				25495	280	12617	12672	29324	29324					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.02	1	90.02	89.52	90.52	0								0	0	0	0.66264	1	37624	37624		0	0	1				25496	280	12617	12672	29325	29325					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.118	1	90.118	89.618	90.618	0								0	0	0	0.66264	1	37664	37664		0	0	1				25497	280	12617	12672	29326	29326					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541381716728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.214	1	90.214	89.714	90.714	0								0	0	0	0.66264	1	37703	37703		0	0	1				25498	280	12617	12672	29327	29327					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.31	1	90.31	89.81	90.81	0								0	0	0	0.66264	1	37743	37743		0	0	1				25499	280	12617	12672	29328	29328					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.409	1	90.409	89.909	90.909	0								0	0	0	0.66264	1	37785	37785		0	0	1				25500	280	12617	12672	29329	29329					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.529	1	90.529	90.029	91.029	0								0	0	0	0.66264	1	37838	37838		0	0	1				25501	280	12617	12672	29330	29330					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541381716728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.652	1	90.652	90.152	91.152	0								0	0	0	0.66264	1	37890	37890		0	0	1				25502	280	12617	12672	29331	29331					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.769	1	90.769	90.269	91.269	0								0	0	0	0.66264	1	37937	37937		0	0	1				25503	280	12617	12672	29332	29332					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.861	1	90.861	90.361	91.361	0								0	0	0	0.66264	1	37975	37975		0	0	1				25504	280	12617	12672	29333	29333					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531005740166	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.956	1	90.956	90.456	91.456	0								0	0	0	0.66264	1	38015	38015		0	0	1				25505	280	12617	12672	29334	29334					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.051	1	91.051	90.551	91.551	0								0	0	0	0.66264	1	38054	38054		0	0	1				25506	280	12617	12672	29335	29335					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534667849541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.143	1	91.143	90.643	91.643	0								0	0	0	0.66264	1	38092	38092		0	0	1				25507	280	12617	12672	29336	29336					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.236	1	91.236	90.736	91.736	0								0	0	0	0.66264	1	38131	38131		0	0	1				25508	280	12617	12672	29337	29337					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.331	1	91.331	90.831	91.831	0								0	0	0	0.66264	1	38171	38171		0	0	1				25509	280	12617	12672	29338	29338					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.429	1	91.429	90.929	91.929	0								0	0	0	0.66264	1	38211	38211		0	0	1				25510	280	12617	12672	29339	29339					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.525	1	91.525	91.025	92.025	0								0	0	0	0.66264	1	38250	38250		0	0	1				25511	280	12617	12672	29340	29340					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.714	1	91.714	91.214	92.214	0								0	0	0	0.66264	1	38327	38327		0	0	1				25512	280	12617	12672	29341	29341					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.808	1	91.808	91.308	92.308	0								0	0	0	0.66264	1	38366	38366		0	0	1				25513	280	12617	12672	29342	29342					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.907	1	91.907	91.407	92.407	0								0	0	0	0.66264	1	38406	38406		0	0	1				25514	280	12617	12672	29343	29343					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.003	1	92.003	91.503	92.503	0								0	0	0	0.66264	1	38446	38446		0	0	1				25515	280	12617	12672	29344	29344					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.129	1	92.129	91.629	92.629	0								0	0	0	0.66264	1	38499	38499		0	0	1				25516	280	12617	12672	29345	29345					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.249	1	92.249	91.749	92.749	0								0	0	0	0.66264	1	38549	38549		0	0	1				25517	280	12617	12672	29346	29346					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.341	1	92.341	91.841	92.841	0								0	0	0	0.66264	1	38587	38587		0	0	1				25518	280	12617	12672	29347	29347					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2530395388603	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.464	1	92.464	91.964	92.964	0								0	0	0	0.66264	1	38640	38640		0	0	1				25519	280	12617	12672	29348	29348					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532836794853	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.579	1	92.579	92.079	93.079	0								0	0	0	0.66264	1	38691	38691		0	0	1				25520	280	12617	12672	29349	29349					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.679	1	92.679	92.179	93.179	0								0	0	0	0.66254	1	38734	38734		0.15932	0	1				25521	280	12617	12672	29350	29350					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.798	1	92.798	92.298	93.298	0								0	0	0	0.66264	1	38786	38786		0	0	1				25522	280	12617	12672	29351	29351					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535888552666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.912	1	92.912	92.412	93.412	0								0	0	0	0.66264	1	38835	38835		0	0	1				25523	280	12617	12672	29352	29352					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540771365166	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.033	1	93.033	92.533	93.533	0								0	0	0	0.66264	1	38886	38886		0	0	1				25524	280	12617	12672	29353	29353					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.125	1	93.125	92.625	93.625	0								0	0	0	0.66264	1	38924	38924		0	0	1				25525	280	12617	12672	29354	29354					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540161013603	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.225	1	93.225	92.725	93.725	0								0	0	0	0.66264	1	38965	38965		0	0	1				25526	280	12617	12672	29355	29355					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538940310478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.318	1	93.318	92.818	93.818	0								0	0	0	0.66264	1	39004	39004		0	0	1				25527	280	12617	12672	29356	29356					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541686892509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.414	1	93.414	92.914	93.914	0								0	0	0	0.66264	1	39043	39043		0	0	1				25528	280	12617	12672	29357	29357					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.515	1	93.515	93.015	94.015	0								0	0	0	0.66264	1	39083	39083		0	0	1				25529	280	12617	12672	29358	29358					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.634	1	93.634	93.134	94.134	0								0	0	0	0.66264	1	39132	39132		0	0	1				25530	280	12617	12672	29359	29359					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.728	1	93.728	93.228	94.228	0								0	0	0	0.66264	1	39171	39171		0	0	1				25531	280	12617	12672	29360	29360					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531921267509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.829	1	93.829	93.329	94.329	0								0	0	0	0.66264	1	39212	39212		0	0	1				25532	280	12617	12672	29361	29361					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.921	1	93.921	93.421	94.421	0								0	0	0	0.66264	1	39250	39250		0	0	1				25533	280	12617	12672	29362	29362					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.018	1	94.018	93.518	94.518	0								0	0	0	0.66264	1	39290	39290		0	0	1				25534	280	12617	12672	29363	29363					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.141	1	94.141	93.641	94.641	0								0	0	0	0.66264	1	39342	39342		0	0	1				25535	280	12617	12672	29364	29364					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.234	1	94.234	93.734	94.734	0								0	0	0	0.66264	1	39381	39381		0	0	1				25536	280	12617	12672	29365	29365					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541381716728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.33	1	94.33	93.83	94.83	0								0	0	0	0.66264	1	39421	39421		0	0	1				25537	280	12617	12672	29366	29366					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.574	1	94.574	94.074	95.074	0								0	0	0	0.66264	1	39526	39526		0	0	1				25538	280	12617	12672	29367	29367					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543212771416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.7	1	94.7	94.2	95.2	0								0	0	0	0.66264	1	39578	39578		0	0	1				25539	280	12617	12672	29368	29368					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538940310478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.821	1	94.821	94.321	95.321	0								0	0	0	0.66264	1	39629	39629		0	0	1				25540	280	12617	12672	29369	29369					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2553283572197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.038	1	95.038	94.538	95.538	0								0	0	0	0.66264	1	39718	39718		0	0	1				25541	280	12617	12672	29370	29370					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541686892509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.342	1	95.342	94.842	95.842	0								0	0	0	0.66264	1	39846	39846		0	0	1				25542	280	12617	12672	29371	29371					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2554199099541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.447	1	95.447	94.947	95.947	0								0	0	0	0.66264	1	39892	39892		0	0	1				25543	280	12617	12672	29372	29372					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541076540947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.557	1	95.557	95.057	96.057	0								0	0	0	0.66264	1	39941	39941		0	0	1				25544	280	12617	12672	29373	29373					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2531616091728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.39	1	100.39	99.886	100.89	0								0	0	0	0.66264	1	42023	42023		0	0	1				25545	280	12617	12672	29374	29374					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543212771416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.5	1	100.5	100	101	0								0	0	0	0.66264	1	42073	42073		0	0	1				25546	280	12617	12672	29375	29375					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2541686892509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.72	1	100.72	100.22	101.22	0								0	0	0	0.66264	1	42163	42163		0	0	1				25547	280	12617	12672	29376	29376					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2546264529228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.83	1	100.83	100.33	101.33	0								0	0	0	0.66264	1	42212	42212		0	0	1				25548	280	12617	12672	29377	29377					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543823122978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.93	1	100.93	100.43	101.43	0								0	0	0	0.66264	1	42254	42254		0	0	1				25549	280	12617	12672	29378	29378					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539245486259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.05	1	101.05	100.55	101.55	0								0	0	0	0.66264	1	42305	42305		0	0	1				25550	280	12617	12672	29379	29379					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2548095583916	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.19	1	101.19	100.69	101.69	0								0	0	0	0.66264	1	42364	42364		0	0	1				25551	280	12617	12672	29380	29380					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2547485232353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.32	1	101.32	100.82	101.82	0								0	0	0	0.66264	1	42427	42427		0	0	1				25552	280	12617	12672	29381	29381					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2540161013603	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.56	1	101.56	101.06	102.06	0								0	0	0	0.66264	1	42528	42528		0	0	1				25553	280	12617	12672	29382	29382					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.67	1	101.67	101.17	102.17	0								0	0	0	0.66264	1	42578	42578		0	0	1				25554	280	12617	12672	29383	29383					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543823122978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.86	1	101.86	101.36	102.36	0								0	0	0	0.66264	1	42657	42657		0	0	1				25555	280	12617	12672	29384	29384					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	101.97	101.47	102.47	0								0	0	0	0.66264	1	42706	42706		0	0	1				25556	280	12617	12672	29385	29385					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2519103884697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.35	1	102.35	101.85	102.85	0								0	0	0	0.66264	1	42883	42883		0	0	1				25557	280	12617	12672	29386	29386					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.678	1	54.001	53.501	54.501	0.32283								0	0	0	0.66254	1	22484	22484		0.15932	0	1				25558	280	12617	12672	29387	29387					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2526122927666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.334	1	98.414	97.914	98.914	0.080376								0	0	0	0.66264	1	41148	41148		0	0	1				25559	280	12617	12672	29388	29388					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2554809451103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.058	1	99.139	98.639	99.639	0.080376								0	0	0	0.66264	1	41472	41472		0	0	1				25560	280	12617	12672	29389	29389					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2552368044853	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.308	1	99.389	98.889	99.889	0.080376								0	0	0	0.66264	1	41578	41578		0	0	1				25561	280	12617	12672	29390	29390					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2555724978447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.429	1	99.509	99.009	100.01	0.080376								0	0	0	0.66264	1	41629	41629		0	0	1				25562	280	12617	12672	29391	29391					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2556640505791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.674	1	99.747	99.247	100.25	0.072716								0	0	0	0.66264	1	41735	41735		0	0	1				25563	280	12617	12672	29392	29392					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2568542361259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.913	1	99.986	99.486	100.49	0.072716								0	0	0	0.66264	1	41836	41836		0	0	1				25564	280	12617	12672	29393	29393					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2560302615166	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.14	1	100.21	99.708	100.71	0.072716								0	0	0	0.66264	1	41925	41925		0	0	1				25565	280	12617	12672	29394	29394					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2554199099541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.23	1	100.3	99.802	100.8	0.072716								0	0	0	0.66264	1	41963	41963		0	0	1				25566	280	12617	12672	29395	29395					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2547180056572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.39	1	100.46	99.962	100.96	0.072716								0	0	0	0.66264	1	42030	42030		0	0	1				25567	280	12617	12672	29396	29396					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2551452517509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.6	1	100.67	100.17	101.17	0.072716								0	0	0	0.66264	1	42117	42117		0	0	1				25568	280	12617	12672	29397	29397					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.71	1	100.78	100.28	101.28	0.070328								0	0	0	0.66264	1	42162	42162		0	0	1				25569	280	12617	12672	29398	29398					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2551757693291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.82	1	100.89	100.39	101.39	0.067009								0	0	0	0.66264	1	42211	42211		0	0	1				25570	280	12617	12672	29399	29399					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2550536990166	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.92	1	100.99	100.49	101.49	0.067009								0	0	0	0.66264	1	42250	42250		0	0	1				25571	280	12617	12672	29400	29400					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2558166384697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.02	1	101.09	100.59	101.59	0.067009								0	0	0	0.66264	1	42291	42291		0	0	1				25572	280	12617	12672	29401	29401					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2552062869072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.14	1	101.2	100.7	101.7	0.067009								0	0	0	0.66264	1	42340	42340		0	0	1				25573	280	12617	12672	29402	29402					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2548400759697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.27	1	101.34	100.84	101.84	0.067009								0	0	0	0.66264	1	42401	42401		0	0	1				25574	280	12617	12672	29403	29403					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2551452517509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.47	1	101.53	101.03	102.03	0.067009								0	0	0	0.66254	1	42483	42483		0.15932	0	1				25575	280	12617	12672	29404	29404					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2551147341728	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.75	1	101.82	101.32	102.32	0.067009								0	0	0	0.66264	1	42602	42602		0	0	1				25576	280	12617	12672	29405	29405					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2552978396416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.84	1	101.91	101.41	102.41	0.067009								0	0	0	0.66264	1	42640	42640		0	0	1				25577	280	12617	12672	29406	29406					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.94	1	102.01	101.51	102.51	0.062805								0	0	0	0.66264	1	42683	42683		0	0	1				25578	280	12617	12672	29407	29407					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.05	1	102.12	101.62	102.62	0.062805								0	0	0	0.66264	1	42731	42731		0	0	1				25579	280	12617	12672	29408	29408					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2517883181572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.3	1	102.36	101.86	102.86	0.062805								0	0	0	0.66264	1	42844	42844		0	0	1				25580	280	12617	12672	29409	29409					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2543823122978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.59	1	100.77	100.27	101.27	0.18047								0	0	0	0.66264	1	42325	42325		0	0	1				25581	280	12617	12672	29410	29410					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2557250857353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.88	1	101.06	100.56	101.56	0.18047								0	0	0	0.66264	1	42448	42448		0	0	1				25582	280	12617	12672	29411	29411					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2556030154228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.01	1	101.19	100.69	101.69	0.18047								0	0	0	0.66264	1	42502	42502		0	0	1				25583	280	12617	12672	29412	29412					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2554809451103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.18	1	101.36	100.86	101.86	0.17698								0	0	0	0.66264	1	42577	42577		0	0	1				25584	280	12617	12672	29413	29413					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2551757693291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.52	1	111.67	111.17	112.17	0.15038								0	0	0	0.66264	1	48331	48331		0	0	1				25585	280	12617	12672	29414	29414					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2546569705009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.63	1	111.78	111.28	112.28	0.15038								0	0	0	0.66264	1	48377	48377		0	0	1				25586	280	12617	12672	29415	29415					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2546874880791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.75	1	111.9	111.4	112.4	0.15038								0	0	0	0.66264	1	48429	48429		0	0	1				25587	280	12617	12672	29416	29416					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2539855837822	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.87	1	112.02	111.52	112.52	0.15038								0	0	0	0.66264	1	48478	48478		0	0	1				25588	280	12617	12672	29417	29417					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2545043826103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112	1	112.15	111.65	112.65	0.15038								0	0	0	0.66264	1	48532	48532		0	0	1				25589	280	12617	12672	29418	29418					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.12	1	112.26	111.76	112.76	0.14912								0	0	0	0.66264	1	48580	48580		0	0	1				25590	280	12617	12672	29419	29419					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2547790408134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.22	1	112.37	111.87	112.87	0.14912								0	0	0	0.66264	1	48622	48622		0	0	1				25591	280	12617	12672	29420	29420					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.35	1	112.5	112	113	0.14912								0	0	0	0.66264	1	48674	48674		0	0	1				25592	280	12617	12672	29421	29421					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.47	1	112.62	112.12	113.12	0.14912								0	0	0	0.66264	1	48725	48725		0	0	1				25593	280	12617	12672	29422	29422					0.2017528800411128
PLLLLPLPVL	10	Unmodified	_PLLLLPLPVL_					0	0	0		nc|ENSG00000164707|Q9UKG4|SLC13A4;chr7:135705650-135706128|176|19.24|0.71|4.75|-|ENST00000354042|SLC13A4,SLC13A4;ENSG00000164707|ENST00000682651|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	nc|ENSG00000164707|Q9UKG4|SLC13A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2536193728447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.6	1	112.75	112.25	113.25	0.14912								0	0	0	0.66264	1	48777	48777		0	0	1				25594	280	12617	12672	29423	29423					0.2017528800411128
PLLLLPLV	8	Unmodified	_PLLLLPLV_					0	0	0		ENSG00000188038|ENST00000339176|NRN1L;nc|ENSG00000141485|Q86YT5-2|SLC13A5;nc|ENSG00000141485|Q86YT5-4|SLC13A5;nc|ENSG00000141485|Q86YT5-3|SLC13A5;ENSG00000141485|ENST00000433363|SLC13A5;ENSG00000185585|ENST00000373580|OLFML2A	ENSG00000188038|ENST00000339176|NRN1L	ENSG00000188038|ENST00000339176|NRN1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.3119994997978	2	439.30969	876.604826	3.197	0.0014045	-0.93065	-0.00040884	2.2663	0.00099561	439.3098264604873	109.23	0.16174	109.28	109.22	109.38	0.048843					9	6	2	0	0	0	0.89198	1	47109	47109		0	0	1	3210900			25595	4847	12618	12673	29424	29424					0.16158798844412559
PLLPCPPSCP	10	Unmodified	_PLLPCPPSCP_					0	0	0			REV__NPLOC4-HEXDC|1|fusion	REV__NPLOC4-HEXDC|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2546874880791	2	512.253731	1022.49291	1.6799	0.00086055	-0.94545	-0.00048431	0.73449	0.00037624	512.2534411811364	34.065	1.2346	34.065	33.76	34.995	0					117	39	4	0	0	0	0.65574	1	14249	14249		20.454	1.0146	1	7179800	+		25596	14484	12619	12674	29425	29425					-0.017437465665466334
PLLPFLALR	9	Unmodified	_PLLPFLALR_					0	0	0			REV__ENSG00000214717|ENST00000652001|ZBED1	REV__ENSG00000214717|ENST00000652001|ZBED1	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2270385622978	3	347.226939	1038.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.89	1	50.89	50.39	51.39	0								0	0	0	0.42693	1	21226	21226		0.26902	0	1		+		25597	11858	12620	12675	29426	29426					0.14120390995958587
PLLRHHPFL	9	Unmodified	_PLLRHHPFL_					0	0	0		ENSG00000284395|ENST00000640283|PERCC1	ENSG00000284395|ENST00000640283|PERCC1	ENSG00000284395|ENST00000640283|PERCC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.7155639529228	2	565.335093	1128.65563	2.7757	0.0015692	-0.72709	-0.00041105	2.0487	0.0011582	565.3344169436959	79.61	0.27947	80.861	80.707	80.987	1.2512					14	8	2	0	0	0	0.11645	1	33351	33351		4.756	0	1	382850			25598	5490	12621	12676	29427	29427					0.0964514094198421
PLLRHYFH	8	Unmodified	_PLLRHYFH_					0	0	0			REV__ENST00000383699.7_1_3:86115904-86116060:+|nuORF	REV__ENST00000383699.7_1_3:86115904-86116060:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8011962771416	2	541.798343	1081.58213	2.4341	0.0013188	1.5227	0.00082499	3.9568	0.0021438	541.7995433454344	65.694	0.94302	67.093	66.663	67.606	1.3989					96	30	4	0	0	0	0.84707	1	27511	27511		17.087	0.14425	1	11867000	+		25599	12787	12622	12677	29428	29428					0.04460592499503946
PLLRLLRLL	9	Unmodified	_PLLRLLRLL_					0	0	0			REV__ENSG00000135519|ENST00000257981|KCNH3	REV__ENSG00000135519|ENST00000257981|KCNH3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	553.7770263552666	2	553.892244	1105.76993	1.7717	0.00098135	-0.79382	-0.00043969	0.97792	0.00054166	553.891629731821	64.834	0.24863	66.762	66.678	66.926	1.928					12	7	2	0	0	0	0.11898	1	27263	27263		0.6015	0	1	325760	+		25600	9945	12623	12678	29429	29429					0.2212803070406153
PLLSLPPLLF	10	Unmodified	_PLLSLPPLLF_					0	0	0			REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19	REV__nc|ENSG00000176601|Q56UN5-3|MAP3K19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3534423708916	2	555.352086	1108.68962	2.8087	0.0015598	-0.20893	-0.00011603	2.5998	0.0014438	555.3518410762648	84.998	0.46016	86.594	86.311	86.771	1.5962					54	17	4	0	0	0	0.89646	1	35620	35620		1.8442	0	1	62070000	+		25601	11187	12624	12679	29430	29430					0.13962124590375424
PLLTFPLSV	9	Unmodified	_PLLTFPLSV_					0	0	0			REV__ENST00000258341.4_1_1:183112029-183112179:+|nuORF	REV__ENST00000258341.4_1_1:183112029-183112179:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.7999145388603	2	493.799686	985.584819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.92	1	87.92	87.42	88.42	0								0	0	0	0.40188	1	36750	36750		8.5933	0	1		+		25602	12174	12625	12680	29431	29431					0.09145003113792427
PLLTQLYSL	9	Unmodified	_PLLTQLYSL_					0	0	0		nc|ENSG00000292336|P46597-2|ASMT;nc|ENSG00000292336|P46597|ASMT;ENSG00000196433|ENST00000381241|ASMT	nc|ENSG00000292336|P46597-2|ASMT	nc|ENSG00000292336|P46597-2|ASMT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.2717773318291	2	524.307875	1046.6012	2.8324	0.001485	-0.66226	-0.00034723	2.1701	0.0011378	524.3074608371976	64.138	0.49805	65.545	65.272	65.77	1.4071					41	15	4	0	0	0	0.094078	1	26963	26963		18.135	2.2878	1	7850700			25603	4937	12626	12681	29432	29432					0.07976084279880524
PLLVLIPRAPK	11	Unmodified	_PLLVLIPRAPK_					0	0	0		ENST00000547572.1_1_12:56722360-56727745:-|nuORF	ENST00000547572.1_1_12:56722360-56727745:-|nuORF	ENST00000547572.1_1_12:56722360-56727745:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2788268923759	3	406.276181	1215.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.876	1	87.423	86.923	87.923	1.547								0	0	0	0.63775	1	36145	36145		0.08335	0.08335	1				25604	7246	12627	12682	29433	29433					0.20744282529972224
PLLYKIMP	8	Unmodified	_PLLYKIMP_					0	0	0			REV__tr|A0A553SGZ6|A0A553SGZ6_NIACIPTSsystemmannitol-specificEIICBcomponentOS=NialliacirculansOX=1397GN=CEQ21_11850PE=4SV=1	REV__tr|A0A553SGZ6|A0A553SGZ6_NIACIPTSsystemmannitol-specificEIICBcomponentOS=NialliacirculansOX=1397GN=CEQ21_11850PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7918578982353	2	487.790807	973.56706	1.8129	0.00088433	0.229	0.0001117	2.0419	0.00099603	487.79088061961113	80.402	0.65707	80.402	80.009	80.666	0					52	20	4	0	0	0	0.88504	1	33535	33535		5.7604	0	1	13946000	+		25605	14773	12628	12683	29434	29434					0.0792196458729677
PLMLIIDE	8	Unmodified	_PLMLIIDE_					0	0	0			REV__ENST00000441966.1_1_6:29297957-29298365:-|nuORF	REV__ENST00000441966.1_1_6:29297957-29298365:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1790649294853	3	315.177145	942.509605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.345	1	80.612	80.112	81.112	1.2668								0	0	0	1.0178	1	33304	33304		0.45834	0	1		+		25606	13089	12629	12684	29435	29435					0.036050775910666744
PLMMWGWV	8	Unmodified	_PLMMWGWV_					0	0	0			REV__tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	REV__tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	510.1191589236259	2	510.245709	1018.47687	1.2475	0.00063653	-3.2783	-0.0016727	-2.0308	-0.0010362	510.2439793840848	29.281	0.51408	29.56	29.32	29.834	0.2793					33	16	3	0	0	0	2.3239	1	12364	12364		6.3541	0.59368	1	1060000	+		25607	15008	12630	12685	29436	29436					-0.031634080127787456
PLMMWGWV	8	Unmodified	_PLMMWGWV_					0	0	0			REV__tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	REV__tr|A0A553SM55|A0A553SM55_NIACIBiotintransporterOS=NialliacirculansOX=1397GN=CEQ21_21860PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.1171447634697	2	510.245709	1018.47687	1.3563	0.00069202	-3.4665	-0.0017688	-2.1103	-0.0010768	510.2440231686499	28.251	0.33228	29.53	29.366	29.698	1.2789					15	10	2	0	0	0	2.3239	1	11877	11877		2.8892	0.31174	1	574420	+		25608	15008	12630	12685	29437	29437					-0.031634080127787456
PLMYKRLLNV	10	Unmodified	_PLMYKRLLNV_					0	0	0			REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	623.8699218630791	2	623.870651	1245.72675	2.561	0.0015978	-1.7192	-0.0010726	0.84184	0.0005252	623.8696326736869	92.371	0.36792	92.54	92.345	92.713	0.16835					28	11	3	0	0	0	0.89803	1	38653	38653		1.4819	0.95714	1	1880800	+		25609	10607	12631	12686	29438	29438					0.11371472864493626
PLNGNKAN	8	Unmodified	_PLNGNKAN_					0	0	0			REV__ENSG00000137076|ENST00000314888|TLN1	REV__ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.2234374880791	2	414.222134	826.429715	0.34942	0.00014474	0.86063	0.00035649	1.2101	0.00050123	414.2225665522238	1.9521	0.21469	2.0992	1.9772	2.1919	0.14703					16	10	2	0	0	0	0.7006	1	782	782		30.225	0	1	595410	+		25610	10010	12632	12687	29439	29439					0.009557720320913177
PLNPIVKIL	9	Unmodified	_PLNPIVKIL_					0	0	0			REV__ENST00000472305.1_1_9:139358117-139360423:-|nuORF	REV__ENST00000472305.1_1_9:139358117-139360423:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2284423708916	3	336.226827	1005.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.181	1	27.442	26.942	27.942	0.26173								0	0	0	0.42693	1	11363	11363		0.26902	0	1		+		25611	10345	12633	12688	29440	29440					0.15604971276150081
PLNQQQLLRTV	11	Unmodified	_PLNQQQLLRTV_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2594482302666	3	437.257738	1308.75138	3.4721	0.0015182	-1.4299	-0.00062524	2.0422	0.00089295	437.25671926980334	82.569	1.4094	83.781	83.099	84.508	1.2125					96	44	3	0	0	0	1.0156	1	34612	34612		2.8433	1.6285	1	2113200	+		25612	10779	12634	12689	29441	29441					0.10935824271541605
PLNQQQLLRTV	11	Unmodified	_PLNQQQLLRTV_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2569152712822	3	437.257738	1308.75138	3.2932	0.00144	-1.0564	-0.00046192	2.2368	0.00097808	437.25701668159905	82.488	1.2799	84.158	83.295	84.574	1.67					72	40	2	0	0	0	0.97905	1	34406	34406		5.0475	2.9615	1	2777200	+		25613	10779	12634	12689	29442	29442					0.10935824271541605
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.346	1	24.346	23.846	24.846	0								0	0	0	0.66227	1	10154	10154		0.62683	0.12087	1		+		25614	12615	12635	12690	29443	29443					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889343142509	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.939	1	23.172	22.672	23.672	0.23306								0	0	0	0.66227	1	9567	9567		0.62683	0.12087	1		+		25615	12615	12635	12690	29444	29444					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887512087822	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.052	1	23.285	22.785	23.785	0.23306								0	0	0	0.66227	1	9614	9614		0.62683	0.12087	1		+		25616	12615	12635	12690	29445	29445					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.231	1	24.474	23.974	24.974	0.24251								0	0	0	0.66227	1	10108	10108		0.62683	0.21856	1		+		25617	12615	12635	12690	29446	29446					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882629275322	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.365	1	26.627	26.127	27.127	0.26173								0	0	0	0.66227	1	11018	11018		0.62683	0.12087	1		+		25618	12615	12635	12690	29447	29447					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8890258669853	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.821	1	22.998	22.498	23.498	1.177								0	0	0	0.66227	1	9115	9115		0.62683	0.12087	1		+		25619	12615	12635	12690	29448	29448					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889037966728	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.301	1	24.516	24.016	25.016	1.2145								0	0	0	0.66227	1	9740	9740		0.62683	0.12087	1		+		25620	12615	12635	12690	29449	29449					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.577	1	24.791	24.291	25.291	1.2145								0	0	0	0.66227	1	9858	9858		0.62683	0.12087	1		+		25621	12615	12635	12690	29450	29450					0.014409171639044871
PLNSREQYRQ	10	Unmodified	_PLNSREQYRQ_					0	0	0			REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	REV__ENST00000366923.7_1_1:220152842-220152914:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887512087822	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.077	1	24.728	24.228	25.228	1.6511								0	0	0	0.66227	1	9635	9635		0.62683	0.12087	1		+		25622	12615	12635	12690	29451	29451					0.014409171639044871
PLPCVCQNL	9	Unmodified	_PLPCVCQNL_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7455322146416	2	493.743531	985.472508	3.5055	0.0017308	-1.697	-0.0008379	1.8085	0.00089294	493.74338243999716	72.974	0.46867	74.304	74.101	74.569	1.3297					47	14	4	0	0	0	0.3154	2	30579	30579;30669		24.674	8.8267	1	24005000			25623	4291	12636	12691	29452;29453	29452					-0.020809172263511755
PLPCVCQNL	9	Unmodified	_PLPCVCQNL_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7449218630791	2	493.743531	985.472508	2.7587	0.0013621	-1.1833	-0.00058426	1.5754	0.00077784	493.74359651322	72.447	0.56366	74.257	74.011	74.574	1.8101					51	17	5	0	0	0	0.3154	1	30358	30358		24.674	5.2349	1	21257000			25624	4291	12636	12691	29454	29454					-0.020809172263511755
PLPEVVHIQL	10	Unmodified	_PLPEVVHIQL_					0	0	0		ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	ENSG00000166856|ENST00000300098|GPR182	MSMS	GG20161007_CRH_Patient100_W632_02	4	572.8420898318291	2	572.839874	1143.66519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.823	1	68.712	68.212	69.212	1.8889								0	0	0	0.59233	1	28035	28035		21.537	2.175	1				25625	3927	12637	12692	29455	29455					0.09910864436869815
PLPFLLMK	8	Unmodified	_PLPFLLMK_					0	0	0		tr|A0A553SPB8|A0A553SPB8_NIACIProtohemeIXfarnesyltransferaseOS=NialliacirculansOX=1397GN=ctaBPE=3SV=1	tr|A0A553SPB8|A0A553SPB8_NIACIProtohemeIXfarnesyltransferaseOS=NialliacirculansOX=1397GN=ctaBPE=3SV=1	tr|A0A553SPB8|A0A553SPB8_NIACIProtohemeIXfarnesyltransferaseOS=NialliacirculansOX=1397GN=ctaBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7950317263603	2	479.793349	957.572146	2.8379	0.0013616	0.56851	0.00027277	3.4064	0.0016344	479.7932504807355	74.59	0.78772	76.372	75.943	76.73	1.7817					44	24	2	0	0	0	0.89176	1	31299	31299		0.79363	0	1	912040			25626	16460	12638	12693	29456	29456					0.09166268449928339
PLPFLVLL	8	Unmodified	_PLPFLVLL_					0	0	0		ENST00000453514.5_1_5:78908374-78908419:+|nuORF	ENST00000453514.5_1_5:78908374-78908419:+|nuORF	ENST00000453514.5_1_5:78908374-78908419:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5360900759697	3	304.537002	910.589176	-2.5814	-0.00078614	1.8368	0.00055936	-0.74469	-0.00022678	304.5374893261294	33.716	1.3537	33.716	33.233	34.587	0					79	43	3	0	0	0	0.89176	1	14055	14055		0.45834	0	1	2662800			25627	6629	12639	12694	29457	29457					0.13030512327384258
PLPFLVLL	8	Unmodified	_PLPFLVLL_					0	0	0		ENST00000453514.5_1_5:78908374-78908419:+|nuORF	ENST00000453514.5_1_5:78908374-78908419:+|nuORF	ENST00000453514.5_1_5:78908374-78908419:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5369750857353	3	304.537002	910.589176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.782	1	22.782	22.282	23.282	0								0	0	0	1.0178	1	9488	9488		0.45834	0	1				25628	6629	12639	12694	29458	29458					0.13030512327384258
PLPFRQHWRRQ	11	Unmodified	_PLPFRQHWRRQ_					0	0	0			REV__ENST00000472387.5_1_10:134165150-134174991:+|nuORF	REV__ENST00000472387.5_1_10:134165150-134174991:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.6179992556572	3	507.616371	1519.82728	2.0459	0.0010385	2.2385	0.0011363	4.2844	0.0021749	507.61690544257567	43.312	0.8575	44.666	43.998	44.855	1.3536					58	27	4	0	0	0	1.0362	1	18168	18168		1.3296	0.11481	1	5836700	+		25629	13295	12640	12695	29459	29459					0.08816265962354919
PLPFRQHWRRQ	11	Unmodified	_PLPFRQHWRRQ_					0	0	0			REV__ENST00000472387.5_1_10:134165150-134174991:+|nuORF	REV__ENST00000472387.5_1_10:134165150-134174991:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.6183654665947	3	507.616371	1519.82728	1.8971	0.00096301	2.9822	0.0015138	4.8793	0.0024768	507.6174322642302	42.603	0.58596	44.524	44.165	44.751	1.9211					53	18	4	0	0	0	1.0362	1	17886	17886		1.3296	0.82369	1	7193700	+		25630	13295	12640	12695	29460	29460					0.08816265962354919
PLPGRDHK	8	Unmodified	_PLPGRDHK_					0	0	0		MEGF8|p.R1953Pfs*3|1|0.11|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant;nc|ENSG00000105429|Q7Z7M0-2|MEGF8;ENSG00000105429|ENST00000251268|MEGF8	MEGF8|p.R1953Pfs*3|1|0.11|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant	MEGF8|p.R1953Pfs*3|1|0.11|ENSG00000105429|chr19:42362390-42362391|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1745788455009	3	307.175126	918.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.722	1	20.17	19.67	20.67	1.448								0	0	0	1.0178	1	7786	7786		0.45834	0	1				25631	1517	12641	12696	29461	29461					0.04103740194409511
PLPHFQEGCTV	11	Unmodified	_PLPHFQEGCTV_					0	0	0		ENST00000483536.6_1_14:26917018-26917168:-|nuORF	ENST00000483536.6_1_14:26917018-26917168:-|nuORF	ENST00000483536.6_1_14:26917018-26917168:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.8673583865166	3	409.865741	1226.57539	2.3077	0.00094586	2.0585	0.00084371	4.3662	0.0017896	410.2007503059225	47.906	0.24595	49.882	49.743	49.989	1.976					13	7	2	0	0	0	0.95124	1	20045	20045		3.0723	0.98626	1	632720			25632	6842	12642	12697	29462	29462					-0.02883133234035995
PLPHLPLLL	9	Unmodified	_PLPHLPLLL_					0	0	0			REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.8325378298759	2	506.83132	1011.64809	4.0796	0.0020677	-1.8161	-0.00092045	2.2636	0.0011472	506.8305019271666	81.841	0.65413	83.053	82.883	83.537	1.2125					43	20	3	0	0	0	0.051525	2	34374	34374;34418		67.413	0	1	3018700	+		25633	12818	12643	12698	29463;29464	29463					0.14272988621712557
PLPHLPLLL	9	Unmodified	_PLPHLPLLL_					0	0	0			REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8328124880791	2	506.83132	1011.64809	3.5091	0.0017785	-0.34423	-0.00017447	3.1648	0.001604	506.8312483916763	81.331	0.5227	83.027	82.86	83.383	1.6959					37	16	3	0	0	0	0.08022	1	34191	34191		56.048	0	1	3061000	+		25634	12818	12643	12698	29465	29465					0.14272988621712557
PLPHLPLLL	9	Unmodified	_PLPHLPLLL_					0	0	0			REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	506.83132	1011.64809	4.0796	0.0020677	-1.8161	-0.00092045	2.2636	0.0011472	506.8305019271666	81.841	0.65413	83.053	82.883	83.537	1.2125	0.013452	-0.00075436	NaN	67.413	43	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3018700	+		25635	12818	12643	12698							0.14272988621712557
PLPHLPLLL	9	Unmodified	_PLPHLPLLL_					0	0	0			REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	REV__ENST00000393784.7_1_5:172324011-172336690:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	506.83132	1011.64809	3.5091	0.0017785	-0.34423	-0.00017447	3.1648	0.001604	506.8312483916763	81.331	0.5227	83.027	82.86	83.383	1.6959	-0.013452	0.00073761	NaN	67.413	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3061000	+		25636	12818	12643	12698							0.14272988621712557
PLPHRLPPV	9	Unmodified	_PLPHRLPPV_					0	0	0		ENST00000573536.1_1_17:3920391-3920838:-|nuORF	ENST00000573536.1_1_17:3920391-3920838:-|nuORF	ENST00000573536.1_1_17:3920391-3920838:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.5471374392509	3	342.546671	1024.61818	0.80839	0.00027691	1.2102	0.00041456	2.0186	0.00069147	342.5469096458078	32.568	0.72196	32.862	32.528	33.25	0.29431					44	24	2	0	0	0	0.77526	1	13672	13672		2.4985	0	1	2855000			25637	7401	12644	12699	29466	29466					0.10686049676360199
PLPHRLPPV	9	Unmodified	_PLPHRLPPV_					0	0	0		ENST00000573536.1_1_17:3920391-3920838:-|nuORF	ENST00000573536.1_1_17:3920391-3920838:-|nuORF	ENST00000573536.1_1_17:3920391-3920838:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8812744021416	3	342.546671	1024.61818	-0.16633	-5.6975E-05	2.8717	0.00098368	2.7053	0.0009267	342.5476261997007	27.534	0.37107	28.813	28.658	29.029	1.2789					22	11	2	0	0	0	0.77526	1	11543	11543		2.4985	0	1	1079800			25638	7401	12644	12699	29467	29467					0.10686049676360199
PLPHTRPA	8	Unmodified	_PLPHTRPA_					0	0	0		ENST00000608517.1_1_1:178694567-178695308:-|nuORF	ENST00000608517.1_1_1:178694567-178695308:-|nuORF	ENST00000608517.1_1_1:178694567-178695308:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1207458376884	2	444.756144	887.497735	2.0058	0.0008921	1.1929	0.00053056	3.1988	0.0014227	444.7571022099697	45.943	0.4997	47.318	46.96	47.46	1.3751					22	15	2	0	0	0	2.3239	1	19243	19243		0.79363	0	1	488000			25639	7570	12645	12700	29468	29468					0.04948641682756261
PLPKKGGG	8	Unmodified	_PLPKKGGG_					0	0	0			REV__ENSG00000178860|ENST00000325509|MSC	REV__ENSG00000178860|ENST00000325509|MSC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	377.7677490115166	2	377.234513	752.454474	2.6373	0.00099488	3.8567	0.0014549	6.494	0.0024498	377.2355995046311	106.91	0.71346	106.96	106.6	107.31	0.052452					46	32	2	0	0	0	2.3239	1	45675	45675		0.69038	0	1	8037900	+		25640	11258	12646	12701	29469	29469					0.06834451905490369
PLPKKGGG	8	Unmodified	_PLPKKGGG_					0	0	0			REV__ENSG00000178860|ENST00000325509|MSC	REV__ENSG00000178860|ENST00000325509|MSC	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	377.234513	752.454474	2.9596	0.0011165	4.1538	0.0015669	7.1134	0.0026834	377.23563115906745	106.88	0.52514	107.04	106.69	107.21	0.16174	0.039715	9.0766E-05	NaN	0.69038	39	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7994500	+		25641	11258	12646	12701							0.06834451905490369
PLPLIKVMLLI	11	Unmodified	_PLPLIKVMLLI_					0	0	0		ENST00000555357.1_1_12:56361683-56362031:+|nuORF	ENST00000555357.1_1_12:56361683-56362031:+|nuORF	ENST00000555357.1_1_12:56361683-56362031:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1250.837207019329	1	1249.83161	1248.82434	2.1127	0.0026405	0.32676	0.0004084	2.4394	0.0030489	1249.8311109406065	108.01	0.066856	108.16	108.13	108.2	0.15795					15	9	2	0	0	0	1.0405	1	46537	46537		0	0	1	43716000			25642	7295	12647	12702	29470	29470					0.20987861740627523
PLPLLLTLK	9	Unmodified	_PLPLLLTLK_					0	0	0		ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.5666381716728	3	336.566961	1006.67905	-0.076441	-2.5728E-05	-1.547	-0.00052065	-1.6234	-0.00054638	336.5666609156685	20.818	0.32467	22.393	22.234	22.559	1.5748					26	10	3	0	0	0	0.77876	1	8640	8640		4.1895	0.59301	1	4398500			25643	6079	12648	12703	29471	29471					0.17598141935945932
PLPLLLTLK	9	Unmodified	_PLPLLLTLK_					0	0	0		ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	336.566961	1006.67905	0.17997	6.0571E-05	-1.0083	-0.00033936	-0.82832	-0.00027879	336.56645469876344	22.287	0.29925	22.51	22.374	22.674	0.223	0.082896	5.2581E-05	NaN	4.1895	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4724800			25644	6079	12648	12703							0.17598141935945932
PLPLLLTLK	9	Unmodified	_PLPLLLTLK_					0	0	0		ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	ENST00000368037.9_1_1:160797618-160797780:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	336.566961	1006.67905	-0.2682	-9.0268E-05	-0.69012	-0.00023227	-0.95832	-0.00032254	336.56673013716625	21.252	0.26968	22.378	22.276	22.545	1.1254	-0.049076	0.00037384	NaN	4.1895	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2902900			25645	6079	12648	12703							0.17598141935945932
PLPLLLWA	8	Unmodified	_PLPLLLWA_					0	0	0			REV__ENST00000522443.1_7:102249007-102257136:-|nuORF	REV__ENST00000522443.1_7:102249007-102257136:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.1962158083916	3	308.196868	921.568775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.059	1	15.059	14.559	15.559	0								0	0	0	1.0178	1	6251	6251		0.45834	0	1		+		25646	13637	12649	12704	29472	29472					0.10485341667560988
PLPLLPCPPSC	11	Unmodified	_PLPLLPCPPSC_					0	0	0			REV__NPLOC4-HEXDC|1|fusion	REV__NPLOC4-HEXDC|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.7959472537041	2	568.795763	1135.57697	1.0296	0.00058565	-0.38088	-0.00021664	0.64875	0.00036901	568.7958847424159	51.938	0.64126	53.335	53.04	53.682	1.3966					80	21	5	0	0	0	0.45252	1	21724	21724		25.399	0	1	30658000	+		25647	14484	12650	12705	29473	29473					0.014607845303544309
PLPLPCEPS	9	Unmodified	_PLPLPCEPS_					0	0	0			REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	REV__ENST00000359297.6_1_1:36806079-36806220:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	952.4854614138603	1	952.480831	951.473554	1.9673	0.0018738	-0.45872	-0.00043692	1.5085	0.0014369	952.4805003417719	41.973	1.4867	43.894	43.324	44.811	1.9211					96	47	3	0	0	0	0.54523	1	17416	17416		13.508	1.8676	1	2849400	+		25648	12585	12651	12706	29474	29474					-0.004123795857935875
PLPLPHIIL	9	Unmodified	_PLPLPHIIL_					0	0	0			REV__ENST00000174618.4_1_17:2288065-2288200:-|nuORF	REV__ENST00000174618.4_1_17:2288065-2288200:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.8332397341728	2	506.83132	1011.64809	3.5091	0.0017785	-0.34423	-0.00017447	3.1648	0.001604	506.8312483916763	81.331	0.5227	83.027	82.86	83.383	1.6959					37	16	3	0	0	0	0.08022	1	34140	34140		56.048	0	1	3061000	+		25649	12047	12652	12707	29475	29475					0.14272988621712557
PLPNPYSFI	9	Unmodified	_PLPNPYSFI_					0	0	0			REV__nc|ENSG00000145113|Q99102-12|MUC4	REV__nc|ENSG00000145113|Q99102-12|MUC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.2820312380791	2	524.279118	1046.54368	2.6473	0.0013879	0.20449	0.00010721	2.8517	0.0014951	524.2805137782614	72.063	1.6506	73.887	73.129	74.779	1.824					132	52	6	0	0	0	0.46566	1	30291	30291		24.674	10.092	1	8531400	+		25650	10268	12653	12708	29476	29476					0.022272420743320254
PLPRLGGGGR	10	Unmodified	_PLPRLGGGGR_					0	0	0		SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|19|2|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|19|2|sense	SVA_B_dup173|chr4:48185818-48187447:+|1.7426897649738875|0.0421009603888101|5.37|413.0|19|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.1443054080009	3	327.198042	978.572297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.81	1	110.86	110.36	111.36	0.047043								0	0	0	0.66264	1	47795	47795		0	0	1				25651	16012	12654	12709	29477	29477					0.08215404494160339
PLPSKLPR	8	Unmodified	_PLPSKLPR_					0	0	0		ENSG00000105278|ENST00000262961|ZFR2;nc|ENSG00000105278|Q9UPR6-3|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1972839236259	3	303.195639	906.565087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.83	1	101.9	101.4	102.4	0.067009								0	0	0	1.0178	1	42635	42635		0.45834	0	1				25652	1506	12655	12710	29478	29478					0.10806671893715247
PLPSLSSGPLF	11	Unmodified	_PLPSLSSGPLF_					0	0	0			REV__ENST00000475678.5_1_2:219130391-219130901:-|nuORF	REV__ENST00000475678.5_1_2:219130391-219130901:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	558.3527099490166	2	557.810782	1113.60701	2.0386	0.0011371	-1.5194	-0.00084753	0.51919	0.00028961	557.810689560465	66.172	0.3908	67.561	67.36	67.751	1.3888					25	12	3	0	0	0	0.14101	1	27773	27773		18.146	3.3081	1	1219800	+		25653	13313	12656	12711	29479	29479					0.05475182791565203
PLPSPLFRAAL	11	Unmodified	_PLPSPLFRAAL_					0	0	0			REV__nc|ENSG00000187595|Q66K41-2|ZNF385C	REV__nc|ENSG00000187595|Q66K41-2|ZNF385C	MSMS	GG20161007_CRH_Patient100_A02_01	1	591.3549072146416	2	591.355691	1180.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.263	1	60.263	59.763	60.763	0								0	0	0	0.63775	1	25133	25133		6.7232	0	1		+		25654	11537	12657	12712	29480	29480					0.1137085719078641
PLPSSGGF	8	Unmodified	_PLPSSGGF_					0	0	0		ENST00000392562.5_1_17:73401186-73401555:-|nuORF	ENST00000392562.5_1_17:73401186-73401555:-|nuORF	ENST00000392562.5_1_17:73401186-73401555:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.1971313357353	2	381.195054	760.375555	2.8894	0.0011014	3.0463	0.0011612	5.9357	0.0022627	381.1958057377916	62.175	0.41957	64.132	63.938	64.358	1.9571					30	13	3	0	0	0	0.88958	1	26135	26135		2.8892	0	1	3274100			25655	6259	12658	12713	29481	29481					-0.014218201194580615
PLPVAPGK	8	Unmodified	_PLPVAPGK_					0	0	0			REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	778.4829589724541	1	778.482151	777.474875	1.3328	0.0010376	1.8118	0.0014104	3.1446	0.002448	778.4836258794259	99.214	0.0868	99.214	99.143	99.23	0					4	2	2	0	0	0	0.88958	1	41527	41527		2.8892	0	1	2867200	+		25656	12236	12659	12714	29482	29482					0.07723622565288224
PLPVAPGK	8	Unmodified	_PLPVAPGK_					0	0	0			REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	778.4822875857353	1	778.482151	777.474875	2.7411	0.0021339	1.325	0.0010315	4.0661	0.0031654	778.4824994776251	99.148	0.12367	99.229	99.145	99.269	0.080368					6	3	2	0	0	0	0.88958	1	41516	41516		2.8892	0	1	2052900	+		25657	12236	12659	12714	29483	29483					0.07723622565288224
PLPVAPGK	8	Unmodified	_PLPVAPGK_					0	0	0			REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	778.482151	777.474875	1.3328	0.0010376	1.8118	0.0014104	3.1446	0.002448	778.4836258794259	99.214	0.0868	99.214	99.143	99.23	0	-0.0074249	0.00011734	NaN	2.8892	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2867200	+		25658	12236	12659	12714							0.07723622565288224
PLPVAPGK	8	Unmodified	_PLPVAPGK_					0	0	0			REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	REV__ENST00000270792.9_1_1:26607741-26607978:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	778.482151	777.474875	2.7411	0.0021339	1.325	0.0010315	4.0661	0.0031654	778.4824994776251	99.148	0.12367	99.229	99.145	99.269	0.080368	0.0074249	-0.0002616	NaN	2.8892	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2052900	+		25659	12236	12659	12714							0.07723622565288224
PLPVCCDV	8	Unmodified	_PLPVCCDV_					0	0	0		ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	ENST00000533005.5_1_11:67811756-67818283:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.1995422244072	2	423.198425	844.382296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.58	1	104.58	104.08	105.08	0								0	0	0	1.0178	1	44172	44172		2.5775	0.27475	1				25660	7180	12660	12715	29484	29484					-0.04611966554773517
PLPVLKVALKR	11	Unmodified	_PLPVLKVALKR_					0	0	0			REV__ENST00000478631.6_2_1:53460811-53461279:+|nuORF	REV__ENST00000478631.6_2_1:53460811-53461279:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	617.4267455935478	2	617.423908	1232.83326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.18	1	117.18	116.68	117.68	0								0	0	0	0.63775	1	50528	50528		0.30703	0.30703	1		+		25661	13328	12661	12716	29485	29485					0.22615971421305403
PLPVVGGVL	9	Unmodified	_PLPVVGGVL_					0	0	0		nc|ENSG00000213901|Q6PIS1-2|SLC23A3;SLC23A3|p.L516Rfs*52|1|0.24|ENSG00000213901|chr2:219162183-219162196|AGGCCTCGCTCAAG/-|frameshift_variant;ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3	nc|ENSG00000213901|Q6PIS1-2|SLC23A3	nc|ENSG00000213901|Q6PIS1-2|SLC23A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7754394412041	2	425.773471	849.53239	0.59667	0.00025405	3.292	0.0014016	3.8887	0.0016557	425.77511658706504	24.019	0.67031	25.704	25.473	26.143	1.6845					68	21	5	0	0	0	0.85403	2	10032	10032;10071		0	0	1	133380000			25662	5232	12662	12717	29486;29487	29486					0.10160464770876843
PLQKKKKK	8	Unmodified	_PLQKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3502685427666	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.16	1	95.348	94.848	95.848	1.1887								0	0	0	1.0178	1	39616	39616		0.79363	0	1				25663	54	12663	12718	29488	29488					0.18231195744556317
PLQKRAKNRRR	11	Unmodified	_PLQKRAKNRRR_					0	0	0		ENST00000264709.7_2_2:25498379-25505441:-|nuORF	ENST00000264709.7_2_2:25498379-25505441:-|nuORF	ENST00000264709.7_2_2:25498379-25505441:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	711.9507324099541	2	711.947467	1421.88038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.444	1	34.444	33.944	34.944	0								0	0	0	0.63775	1	14438	14438		1.3295	0	1				25664	5652	12664	12719	29489	29489					0.18631643744993198
PLQMHWGELW	10	Unmodified	_PLQMHWGELW_					0	0	0		ENST00000541444.5_1_12:1902823-1906819:-|nuORF	ENST00000541444.5_1_12:1902823-1906819:-|nuORF	ENST00000541444.5_1_12:1902823-1906819:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.8148071169853	2	648.813333	1295.61211	3.6012	0.0023365	-2.0305	-0.0013174	1.5707	0.0010191	648.8118626690773	82.229	1.188	83.9	83.17	84.358	1.67					62	37	2	0	0	0	0.84024	1	34393	34393		7.9102	2.1783	1	1029700			25665	7218	12665	12720	29490	29490					-0.02386836617483823
PLQSLWLLP	9	Unmodified	_PLQSLWLLP_					0	0	0		SLC8B1|p.S553Kfs*33|1|0.25|ENSG00000089060|chr12:113299874-113299875|-/AAGGGCCGCACTCTCGTGCCCACAAGGGCCT|frameshift_variant	SLC8B1|p.S553Kfs*33|1|0.25|ENSG00000089060|chr12:113299874-113299875|-/AAGGGCCGCACTCTCGTGCCCACAAGGGCCT|frameshift_variant	SLC8B1|p.S553Kfs*33|1|0.25|ENSG00000089060|chr12:113299874-113299875|-/AAGGGCCGCACTCTCGTGCCCACAAGGGCCT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1916992068291	2	533.81841	1065.62227	1.6277	0.00086892	-0.90684	-0.00048409	0.72091	0.00038483	533.8187070513312	39.01	0.19421	40.847	40.719	40.913	1.8366					9	5	2	0	0	0	0.11787	1	16335	16335		5.2307	0	1	487260			25666	15963	12666	12721	29491	29491					0.0920809437943717
PLRAERVCAL	10	Unmodified	_PLRAERVCAL_					0	0	0		ENST00000527285.1_1_11:18728156-18728432:+|nuORF	ENST00000527285.1_1_11:18728156-18728432:+|nuORF	ENST00000527285.1_1_11:18728156-18728432:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.7155639529228	2	564.321325	1126.6281	2.7931	0.0015762	-0.19773	-0.00011158	2.5954	0.0014646	564.3201319553332	79.472	0.093994	80.723	80.675	80.769	1.2512					4	2	2	0	0	0	0.12513	1	33351	33351		4.3292	0	1	123310			25667	7133	12667	12722	29492	29492					0.0698486961944127
PLRCLKKNPV	10	Unmodified	_PLRCLKKNPV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3571655154228	2	584.355168	1166.69578	1.8497	0.0010809	2.6318	0.0015379	4.4815	0.0026188	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	0.89803	1	30495	30495		1.6526	0.17072	1	3000400	+		25668	10665	12668	12723	29493	29493					0.1191031955024755
PLRCLKKNPV	10	Unmodified	_PLRCLKKNPV_					0	0	0			REV__nc|ENSG00000162782|Q8NAT2|TDRD5	REV__nc|ENSG00000162782|Q8NAT2|TDRD5	MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3585693240166	2	584.355168	1166.69578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.084	1	77.401	76.901	77.901	0.31653								0	0	0	0.66166	1	32236	32236		1.6526	0.17072	1		+		25669	10665	12668	12723	29494	29494					0.1191031955024755
PLRCRCCWWRR	11	Unmodified	_PLRCRCCWWRR_					0	0	0		ENST00000265594.8_1_3:182812367-182817305:-|nuORF	ENST00000265594.8_1_3:182812367-182817305:-|nuORF	ENST00000265594.8_1_3:182812367-182817305:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.5895263552666	3	512.253282	1533.73802	1.0335	0.00052942	1.0994	0.00056318	2.1329	0.0010926	512.2544506027472	19.4	2.9513	19.4	19.045	21.997	0					231	94	7	0	0	0	1.0362	1	9060	9060		1.3296	0	1	230570000			25670	5656	12669	12724	29495	29495					-0.007503515847020026
PLRFRISKK	9	Unmodified	_PLRFRISKK_					0	0	0			REV__ENST00000416373.6_1_9:110046419-110062447:+|nuORF	REV__ENST00000416373.6_1_9:110046419-110062447:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	382.2431518435478	3	382.248625	1143.72405	1.8589	0.00071057	-1.7622	-0.0006736	0.096719	3.6971E-05	382.2481465777769	46.765	1.5167	48.741	47.857	49.374	1.976					74	48	2	0	0	0	0.11941	1	19222	19222		0.23584	0	1	18745000	+		25671	12947	12670	12725	29496	29496					0.15793385521828895
PLRGIVLPKLK	11	Unmodified	_PLRGIVLPKLK_					0	0	0			REV__nc|ENSG00000179886|Q53EQ6-2|TIGD5	REV__nc|ENSG00000179886|Q53EQ6-2|TIGD5	MSMS	GG20161007_CRH_Patient100_A02_01	1	617.4269286990166	2	617.423908	1232.83326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.25	1	118.25	117.75	118.75	0								0	0	0	0.63775	1	50959	50959		0.35063	0	1		+		25672	11286	12671	12726	29497	29497					0.22615971421305403
PLRGLLLR	8	Unmodified	_PLRGLLLR_					0	0	0			REV__ENST00000452611.6_1_12:3701418-3702296:+|nuORF	REV__ENST00000452611.6_1_12:3701418-3702296:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	313.2166625857353	3	313.215033	936.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.34	1	107.39	106.89	107.89	0.052452								0	0	0	1.0178	1	45895	45895		0.45834	0	1		+		25673	13144	12672	12727	29498	29498					0.15242353538997122
PLRGLLLR	8	Unmodified	_PLRGLLLR_					0	0	0			REV__ENST00000452611.6_1_12:3701418-3702296:+|nuORF	REV__ENST00000452611.6_1_12:3701418-3702296:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	313.2169677615166	3	313.215033	936.62327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.31	1	107.47	106.97	107.97	0.15781								0	0	0	1.0178	1	46124	46124		0.45834	0	1		+		25674	13144	12672	12727	29499	29499					0.15242353538997122
PLRHKPIQ	8	Unmodified	_PLRHKPIQ_					0	0	0			REV__ENST00000398637.9_1_12:46578652-46578736:-|nuORF	REV__ENST00000398637.9_1_12:46578652-46578736:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	494.3115112185478	2	494.806168	987.597784	2.3212	0.0011486	4.4296	0.0021918	6.7508	0.0033403	494.8081037538285	39.332	0.19315	40.628	40.507	40.701	1.2961					7	5	2	0	0	0	2.3239	1	16495	16495		4.756	0	1	763270	+		25675	12872	12673	12728	29500	29500					0.10348879016555657
PLRLLQLVKRV	11	Unmodified	_PLRLLQLVKRV_					0	0	0			REV__ENST00000449200.1_1_22:40502501-40502987:-|nuORF	REV__ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4788696169853	4	334.48032	1333.89217	0.15656	5.2368E-05	-3.963	-0.0013255	-3.8064	-0.0012732	334.48033157320106	22.286	1.7562	22.509	22.173	23.929	0.223					274	57	7	0	0	0	1.0402	1	9786	9786		0.094841	0	1	820460000	+		25676	13120	12674	12729	29501	29501					0.23858447715633702
PLRLLQLVKRV	11	Unmodified	_PLRLLQLVKRV_					0	0	0			REV__ENST00000449200.1_1_22:40502501-40502987:-|nuORF	REV__ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4786559939384	4	334.48032	1333.89217	-0.046462	-1.5541E-05	-3.1589	-0.0010566	-3.2053	-0.0010721	334.48064893038537	22.694	1.8804	23.908	23.609	25.489	1.2145					295	60	7	0	0	0	1.0402	1	9381	9381		0.094841	0	1	642000000	+		25677	13120	12674	12729	29502	29502					0.23858447715633702
PLRLTRHASL	10	Unmodified	_PLRLTRHASL_					0	0	0			REV__AluSp_dup48944|chr21:8406155-8406395:-|2.8579853165331475|0.3319044745033751|3.11|424.0|7|1|anti-sense	REV__AluSp_dup48944|chr21:8406155-8406395:-|2.8579853165331475|0.3319044745033751|3.11|424.0|7|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3546020388603	2	582.354014	1162.69348	5.0158	0.002921	-1.0632	-0.00061915	3.9526	0.0023018	582.353257548412	89.641	0.62501	90.661	90.397	91.022	1.0199					59	19	4	0	0	0	0.89803	1	37710	37710		1.4819	0.8804	1	15992000	+		25678	8109	12675	12730	29503	29503					0.11863607136797327
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.6360656619072	3	445.635598	1333.88496	1.2113	0.00053981	0.16864	7.5151E-05	1.38	0.00061497	445.635613129819	22.286	1.0715	22.509	22.232	23.304	0.223					111	35	5	0	0	0	1.0405	3	9195	9195;9244;9283		0	0	1	53773000	+		25679	10472	12676	12731	29504;29505;29506	29504					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	445.6362487673759	3	445.635598	1333.88496	1.313	0.00058511	0.73562	0.00032782	2.0486	0.00091293	445.6358522188413	23.939	1.2216	24.181	24.043	25.264	0.24252					149	39	5	0	0	0	1.0405	5	9974	9974;10025;10064;10103;10157		0	0	1	17854000	+		25680	10472	12676	12731	29507;29508;29509;29510;29511	29507					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4786254763603	4	334.478518	1333.88496	0.36212	0.00012112	0.051147	1.7107E-05	0.41326	0.00013823	334.47876618496844	26.168	2.3423	26.43	25.684	28.027	0.26173					307	76	6	0	0	0	1.0402	1	11183	11183		0.094841	0	1	151020000	+		25681	10472	12676	12731	29512	29512					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4786865115166	4	334.478518	1333.88496	0.54644	0.00018277	0.72764	0.00024338	1.2741	0.00042615	334.478685127546	29.877	4.6419	30.163	27.97	32.612	0.2859					310	153	3	0	0	0	1.0405	7	11780	11780;11860;11971;12105;12244;12296;12347		0	0	1	2385400	+		25682	10472	12676	12731	29513;29514;29515;29516;29517;29518;29519	29513					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.0323974490166	4	334.478518	1333.88496	0.54644	0.00018277	0.72764	0.00024338	1.2741	0.00042615	334.478685127546	29.877	4.6419	30.163	27.97	32.612	0.2859					310	153	3	0	0	0	0.14606	1	13506	13506		0	0	1	2385400	+		25683	10472	12676	12731	29520	29520					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1204101443291	3	445.635598	1333.88496	1.2113	0.00053981	0.16864	7.5151E-05	1.38	0.00061497	445.635613129819	22.286	1.0715	22.509	22.232	23.304	0.223					111	35	5	0	0	0	0.14606	1	9182	9182		0	0	1	53773000	+		25684	10472	12676	12731	29521	29521					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1206237673759	3	445.635598	1333.88496	1.3634	0.00060756	1.1311	0.00050406	2.4945	0.0011116	445.97048480118434	25.106	0.2465	25.358	25.274	25.52	0.25197					9	7	2	0	0	0	0.14606	1	10475	10475		0	0	1	259220	+		25685	10472	12676	12731	29522	29522					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	445.6360961794853	3	445.635598	1333.88496	1.1914	0.00053091	0.35943	0.00016017	1.5508	0.00069109	445.635683700454	21.077	0.80614	22.203	22.072	22.878	1.1254					81	26	4	0	0	0	1.0405	2	8800	8800;8862		0	0	1	16425000	+		25686	10472	12676	12731	29523;29524	29523					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	445.6360961794853	3	445.635598	1333.88496	1.4186	0.00063216	1.0519	0.00046874	2.4704	0.0011009	445.6358666116111	22.701	0.89031	23.915	23.736	24.627	1.2145					83	28	4	0	0	0	1.0405	1	9486	9486		0	0	1	12979000	+		25687	10472	12676	12731	29525	29525					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4787475466728	4	334.478518	1333.88496	-0.17747	-5.936E-05	1.2348	0.000413	1.0573	0.00035364	334.47881461304644	27.266	1.7945	28.538	28.295	30.089	1.2715					119	58	3	0	0	0	1.0405	3	11499	11499;11552;11605		0	0	1	3180900	+		25688	10472	12676	12731	29526;29527;29528	29526					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1198913455009	3	445.635598	1333.88496	1.1914	0.00053091	0.35943	0.00016017	1.5508	0.00069109	445.635683700454	21.077	0.80614	22.203	22.072	22.878	1.1254					81	26	4	0	0	0	0.14606	1	8832	8832		0	0	1	16425000	+		25689	10472	12676	12731	29529	29529					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4789306521416	4	334.478518	1333.88496	0.15925	5.3265E-05	0.80271	0.00026849	0.96196	0.00032176	334.47872159816603	26.805	1.0178	28.552	28.308	29.326	1.747					92	33	3	0	0	0	1.0405	2	11350	11350;11403		0	0	1	2439000	+		25690	10472	12676	12731	29530;29531	29530					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4783508181572	4	334.478518	1333.88496	0.24752	8.2792E-05	0.16446	5.5009E-05	0.41199	0.0001378	334.47844759123393	29.367	1.2087	31.166	30.359	31.568	1.7987					80	39	3	0	0	0	1.0405	1	12308	12308		0	0	1	2256200	+		25691	10472	12676	12731	29532	29532					0.2313771511521736
PLRLVLLWVLL	11	Unmodified	_PLRLVLLWVLL_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	335.2190429568291	4	334.478518	1333.88496	0.24752	8.2792E-05	0.16446	5.5009E-05	0.41199	0.0001378	334.47844759123393	29.367	1.2087	31.166	30.359	31.568	1.7987					80	39	3	0	0	0	0.14606	1	12225	12225		0	0	1	2256200	+		25692	10472	12676	12731	29533	29533					0.2313771511521736
PLRPHYPK	8	Unmodified	_PLRPHYPK_					0	0	0			REV__ENSG00000088538|ENST00000266037|DOCK3	REV__ENSG00000088538|ENST00000266037|DOCK3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	337.2171203494072	3	336.531021	1006.57123	-0.037429	-1.2596E-05	-0.98323	-0.00033089	-1.0207	-0.00034348	336.53069645791277	18.254	0.23886	18.427	18.334	18.573	0.17286					15	9	2	0	0	0	2.3239	1	7617	7617		0	0	1	184520	+		25693	8875	12677	12732	29534	29534					0.068211901252198
PLRQLAPL	8	Unmodified	_PLRQLAPL_					0	0	0			REV__chr19:10258685-10259738|138|13.39|0.34|5.3|+|0|MRPL4,None|2	REV__chr19:10258685-10259738|138|13.39|0.34|5.3|+|0|MRPL4,None|2	MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1945983767509	3	303.195639	906.565087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.05	1	104.23	103.73	104.73	0.1731								0	0	0	1.0178	1	43951	43951		0.45834	0	1		+		25694	8281	12678	12733	29535	29535					0.10806671893681141
PLRQRRQLLVR	11	Unmodified	_PLRQRRQLLVR_					0	0	0		ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4833557009697	4	359.48366	1433.90553	-1.3554	-0.00048724	0.4002	0.00014387	-0.9552	-0.00034338	359.4837626090117	31.334	2.3411	31.334	30.039	32.38	0					164	75	4	0	0	0	1.0391	2	13068	13068;13118		0.40827	0.078994	1	27624000			25695	6984	12679	12734	29536;29537	29536					0.20593698547577333
PLRQRRQLLVR	11	Unmodified	_PLRQRRQLLVR_					0	0	0		ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4830810427666	4	359.48366	1433.90553	-0.0088838	-3.1936E-06	-1.5329	-0.00055104	-1.5418	-0.00055424	359.4829911547571	26.427	1.0213	27.698	27.153	28.174	1.2715					132	32	5	0	0	0	1.0391	1	11107	11107		0.40827	0	1	23682000			25696	6984	12679	12734	29538	29538					0.20593698547577333
PLRQRRQLLVR	11	Unmodified	_PLRQRRQLLVR_					0	0	0		ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	ENST00000503078.5_1_5:176943632-176943958:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4827148318291	4	359.48366	1433.90553	-0.24428	-8.7814E-05	-1.7993	-0.00064684	-2.0436	-0.00073465	359.48291863379364	28.8	2.1919	30.082	29.125	31.317	1.2825					177	71	5	0	0	0	1.0391	1	11952	11952		0.40827	0.041592	1	23719000			25697	6984	12679	12734	29539	29539					0.20593698547577333
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9441406130791	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.666	1	17.666	17.166	18.166	0								0	0	0	0.6624	1	7335	7335		0.40072	0	1				25698	5996	12680	12735	29540	29540					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9478027224541	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.169	1	45.169	44.669	45.669	0								0	0	0	0.6624	1	18901	18901		0.40072	0	1				25699	5996	12680	12735	29541	29541					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9429809451103	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.115	1	46.115	45.615	46.615	0								0	0	0	0.6624	1	19286	19286		0.40072	0	1				25700	5996	12680	12735	29542	29542					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9453002810478	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.967	1	46.967	46.467	47.467	0								0	0	0	0.66237	1	19628	19628		0.45834	0	1				25701	5996	12680	12735	29543	29543					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9446899294853	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.784	1	62.784	62.284	63.284	0								0	0	0	0.66237	1	26176	26176		0.45834	0	1				25702	5996	12680	12735	29544	29544					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9420654177666	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.276	1	22.499	21.999	22.999	0.223								0	0	0	0.6624	1	9277	9277		0.40072	0	1				25703	5996	12680	12735	29545	29545					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9447509646416	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.282	1	47.613	47.113	48.113	0.33034								0	0	0	0.6624	1	19833	19833		0.40072	0	1				25704	5996	12680	12735	29546	29546					0.22669750584282156
PLRRRRVLVR	10	Unmodified	_PLRRRRVLVR_					0	0	0		ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9439575076103	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.796	1	58.119	57.619	58.619	0.32298								0	0	0	0.6624	1	24231	24231		0.40072	0	1				25705	5996	12680	12735	29547	29547					0.22669750584282156
PLRRRVKV	8	Unmodified	_PLRRRVKV_					0	0	0			REV__ENST00000482088.5_1_9:140007335-140007673:-|nuORF	REV__ENST00000482088.5_1_9:140007335-140007673:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	341.9703552126884	3	341.901449	1022.68252	-1.2027	-0.00041119	-3.0316	-0.0010365	-4.2343	-0.0014477	341.9004131360073	50.676	0.41358	50.676	50.373	50.787	0					20	12	2	0	0	0	2.3239	1	21051	21051		0	0	1	705300	+		25706	13367	12681	12736	29548	29548					0.17208249553175392
PLRVHQLV	8	Unmodified	_PLRVHQLV_					0	0	0			REV__ENSG00000076321|ENST00000209884|KLHL20	REV__ENSG00000076321|ENST00000209884|KLHL20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.3040038943291	2	481.300719	960.586885	0.77086	0.00037101	1.0623	0.00051128	1.8331	0.00088229	481.30113390984224	70.836	0.32962	72.673	72.503	72.832	1.8378					19	10	2	0	0	0	0.88409	1	29779	29779		6.3541	0	1	1865000	+		25707	8769	12682	12737	29549	29549					0.1050147664227552
PLSIFLPTWP	10	Unmodified	_PLSIFLPTWP_					0	0	0			REV__ENST00000225665.11_1_17:4840855-4840987:-|nuORF	REV__ENST00000225665.11_1_17:4840855-4840987:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2849609255791	3	390.890104	1169.64848	1.7447	0.00068199	-0.56681	-0.00022156	1.1779	0.00046043	390.8898616441964	44.218	0.66578	45.572	45.315	45.981	1.3536					36	20	3	0	0	0	0.12559	1	18651	18651		0.15932	0	1	1411100	+		25708	12087	12683	12738	29550	29550					0.07044363550880917
PLSIGMIKQLR	11	Unmodified	_PLSIGMIKQLR_					0	0	0			REV__nc|ENSG00000166391|Q3SYC2-2|MOGAT2	REV__nc|ENSG00000166391|Q3SYC2-2|MOGAT2	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3849975466728	2	628.381383	1254.74821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.733	1	81.45	80.95	81.95	1.7167								0	0	0	0.63775	1	33442	33442		5.2969	0	1		+		25709	10822	12684	12739	29551	29551					0.13102857893181863
PLSLFMHLILL	11	Oxidation (M)	_PLSLFM(Oxidation (M))HLILL_		PLSLFM(1)HLILL		PLSLFM(46)HLILL	0	0	1		ENSG00000182489|ENST00000372956|XKRX	ENSG00000182489|ENST00000372956|XKRX	ENSG00000182489|ENST00000372956|XKRX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8910400271416	2	656.888509	1311.76247	2.3746	0.0015598	2.2125	0.0014533	4.587	0.0030132	656.8898839263736	75.446	0.49445	76.752	76.524	77.018	1.3063					58	15	5	0	0	0	0.1544	1	31620	31620		46.021	9.8939	1	19791000			25710	4618	12685	12740	29552	29552		79			0.11905510321503243
PLSLFMHLILL	11	Oxidation (M)	_PLSLFM(Oxidation (M))HLILL_		PLSLFM(1)HLILL		PLSLFM(55)HLILL	0	0	1		ENSG00000182489|ENST00000372956|XKRX	ENSG00000182489|ENST00000372956|XKRX	ENSG00000182489|ENST00000372956|XKRX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8911010622978	2	656.888509	1311.76247	2.7165	0.0017844	1.2128	0.00079665	3.9292	0.0025811	656.8893176713786	74.988	0.4657	76.77	76.543	77.009	1.7817					48	14	5	0	0	0	0.10558	1	31447	31447		54.774	10.915	1	16604000			25711	4618	12685	12740	29553	29553		79			0.11905510321503243
PLSLPLFSF	9	Unmodified	_PLSLPLFSF_					0	0	0			REV__ENST00000302386.9_1_17:7143934-7144000:-|nuORF	REV__ENST00000302386.9_1_17:7143934-7144000:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7955810427666	2	510.791861	1019.56917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.562	1	89.058	88.558	89.558	1.4953								0	0	0	0.35192	1	36914	36914		13.508	0	1		+		25712	12318	12686	12741	29554	29554					0.06016716596764127
PLSLPTLSL	9	Unmodified	_PLSLPTLSL_					0	0	0			REV__ENST00000546006.5_1_16:30770549-30771803:-|nuORF	REV__ENST00000546006.5_1_16:30770549-30771803:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.7918273806572	2	470.789318	939.564084	2.3081	0.0010866	0.88237	0.00041541	3.1905	0.0015021	470.7899437269778	79.034	0.27937	80.769	80.691	80.97	1.735					16	8	2	0	0	0	0.22519	1	33152	33152		30.225	0	1	2686800	+		25713	13764	12687	12742	29555	29555					0.09188412734147278
PLSLYKKVL	9	Unmodified	_PLSLYKKVL_					0	0	0		ENSG00000184967|ENST00000330579|NOC4L;ENST00000535343.5_1_12:132632219-132636084:+|nuORF	ENSG00000184967|ENST00000330579|NOC4L	ENSG00000184967|ENST00000330579|NOC4L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0674621462822	3	354.230349	1059.66922	-0.7881	-0.00027917	3.8525	0.0013647	3.0644	0.0010855	354.56596208720055	51.002	0.15577	52.977	52.851	53.007	1.9753					6	5	2	0	0	0	0.11948	1	21371	21371		1.0715	0.83562	1	963220			25714	4721	12688	12743	29556	29556					0.14176953930564196
PLSQYIAFA	9	Unmodified	_PLSQYIAFA_					0	0	0			REV__ENSG00000188921|ENST00000495827|HACD4	REV__ENSG00000188921|ENST00000495827|HACD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2717468142509	2	505.271293	1008.52803	2.6681	0.0013481	-0.59203	-0.00029913	2.0761	0.001049	505.27104841151885	75.551	0.42122	77.332	77.072	77.493	1.7817					28	13	3	0	0	0	0.083604	1	31714	31714		54.774	4.8406	1	2983500	+		25715	11594	12689	12744	29557	29557					0.024109555572636054
PLSRLKIYYL	10	Unmodified	_PLSRLKIYYL_					0	0	0		ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1963683962822	4	317.195862	1264.75434	-0.81714	-0.00025919	0.75063	0.0002381	-0.066502	-2.1094E-05	317.19604679544847	34.045	0.33438	35.32	35.187	35.522	1.2746					85	35	3	0	0	0	0.88278	1	14253	14253		3.3196	0.68841	1	60683000			25716	6172	12690	12745	29558	29558					0.13255699396358978
PLSRLKIYYL	10	Unmodified	_PLSRLKIYYL_					0	0	0		ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	ENST00000374199.8_1_9:116054008-116054197:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	317.195862	1264.75434	0.14832	4.7045E-05	-0.28981	-9.1926E-05	-0.14149	-4.4881E-05	317.19572652283154	33.632	0.37411	35.455	35.255	35.629	1.8227	0.067627	-0.00067798	NaN	3.3196	80	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55195000			25717	6172	12690	12745							0.13255699396358978
PLSRPIARTR	10	Unmodified	_PLSRPIARTR_					0	0	0			REV__ENST00000314485.11_2_1:160068207-160068342:-|nuORF	REV__ENST00000314485.11_2_1:160068207-160068342:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.8605224490166	2	583.859464	1165.70437	2.2884	0.0013361	-0.86666	-0.00050601	1.4217	0.00083007	583.8591925923532	83.083	0.5809	83.083	82.892	83.473	0					38	18	3	0	0	0	0.89803	1	34640	34640		1.1933	0	1	1953200	+		25718	12382	12691	12746	29559	29559					0.12815009511041353
PLSVLEILSL	10	Unmodified	_PLSVLEILSL_					0	0	0		EXOC3L2|p.L134Tfs*25|1|0.26|ENSG00000283632|chr19:45227667-45227668|-/G|frameshift_variant;ENSG00000283632|ENST00000413988|EXOC3L2	EXOC3L2|p.L134Tfs*25|1|0.26|ENSG00000283632|chr19:45227667-45227668|-/G|frameshift_variant	EXOC3L2|p.L134Tfs*25|1|0.26|ENSG00000283632|chr19:45227667-45227668|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3384887576103	2	542.336633	1082.65871	4.1844	0.0022693	-1.1521	-0.00062485	3.0323	0.0016445	542.3356551932701	93.592	0.25325	94.464	94.29	94.544	0.87176					12	7	2	0	0	0	0.81324	1	39397	39397		10.824	0	1	957650			25719	5487	12692	12747	29560	29560					0.1206892648547182
PLTFGPIYL	9	Unmodified	_PLTFGPIYL_					0	0	0			REV__ENST00000589644.1_1_19:38799520-38799736:-|nuORF	REV__ENST00000589644.1_1_19:38799520-38799736:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7933227419853	2	510.791861	1019.56917	5.4327	0.002775	0.90389	0.0004617	6.3366	0.0032367	510.7919960383775	87.929	0.3173	88.986	88.827	89.144	1.0562					15	9	2	0	0	0	0.51832	1	37060	37060		14.582	1.0738	1	760370	+		25720	14057	12693	12748	29561	29561					0.060167165967413894
PLTLQIIYS	9	Unmodified	_PLTLQIIYS_					0	0	0		nc|ENSG00000141506|Q8WYR1-2|PIK3R5;ENST00000578515.5_1_17:8785060-8814811:-|nuORF;ENSG00000141506|ENST00000447110|PIK3R5	nc|ENSG00000141506|Q8WYR1-2|PIK3R5	nc|ENSG00000141506|Q8WYR1-2|PIK3R5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3089477419853	2	524.307875	1046.6012	1.7921	0.00093962	-0.54284	-0.00028461	1.2493	0.000655	524.308039676312	67.634	0.43694	69.504	69.299	69.736	1.87					29	13	3	0	0	0	0.11643	1	28409	28409		43.858	3.901	1	5244400			25721	2963	12694	12749	29562	29562					0.07976084279880524
PLTRLRQR	8	Unmodified	_PLTRLRQR_					0	0	0			REV__ENST00000477755.1_1_1:10491250-10491280:+|nuORF	REV__ENST00000477755.1_1_1:10491250-10491280:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.3296996951103	2	520.327799	1038.64105	2.9164	0.0015175	0.26318	0.00013694	3.1796	0.0016544	520.3277752265809	100.06	0.09861	100.14	100.09	100.19	0.072716					4	2	2	0	0	0	0.89152	1	41905	41905		0.69038	0	1	3291800	+		25722	13321	12695	12750	29563	29563					0.12327068793842955
PLTSLPQPWPF	11	Unmodified	_PLTSLPQPWPF_					0	0	0			REV__ENSG00000110777|ENST00000393067|POU2AF1	REV__ENSG00000110777|ENST00000393067|POU2AF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8470947146416	2	641.845156	1281.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.088	1	52.482	51.982	52.982	1.3938								0	0	0	0.63772	1	21389	21389		9.3831	2.66	1		+		25723	9305	12696	12751	29564	29564					0.04618847091251155
PLTTVLTSV	9	Unmodified	_PLTTVLTSV_					0	0	0			REV__nc|ENSG00000169894|Q02505-5|MUC3A	REV__nc|ENSG00000169894|Q02505-5|MUC3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.5496093630791	1	930.550625	929.543348	2.2793	0.002121	-0.56294	-0.00052384	1.7163	0.0015971	930.5494549792984	82.591	0.33469	82.871	82.704	83.039	0.2802					19	10	2	0	0	0	0.37357	1	34496	34496		21.747	0	1	2034300	+		25724	10966	12697	12752	29565	29565					0.07575822354465345
PLTVERHLI	9	Unmodified	_PLTVERHLI_					0	0	0			REV__ENST00000359644.7_1_3:130672752-130673910:+|nuORF	REV__ENST00000359644.7_1_3:130672752-130673910:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.7933837771416	2	539.324391	1076.63423	1.9838	0.0010699	-0.80413	-0.00043369	1.1796	0.00063621	539.3230806129906	66.647	0.989	68.036	67.418	68.407	1.3888					61	31	4	0	0	0	0.10844	1	28063	28063		11.64	0	1	5062800	+		25725	12588	12698	12753	29566	29566					0.09897711122607689
PLVDPVKRL	9	Unmodified	_PLVDPVKRL_					0	0	0			REV__ENSG00000011007|ENST00000613537|ELOA	REV__ENSG00000011007|ENST00000613537|ELOA	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2218505740166	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.55	1	79.55	79.05	80.05	0								0	0	0	0.42693	1	33124	33124		0.26902	0	1		+		25726	8530	12699	12754	29567	29567					0.12766899127996112
PLVDPVKRL	9	Unmodified	_PLVDPVKRL_					0	0	0			REV__ENSG00000011007|ENST00000613537|ELOA	REV__ENSG00000011007|ENST00000613537|ELOA	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2243530154228	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.494	1	84.682	84.182	85.182	1.1879								0	0	0	0.42693	1	35044	35044		0.26902	0	1		+		25727	8530	12699	12754	29568	29568					0.12766899127996112
PLVKIIPKLLI	11	Unmodified	_PLVKIIPKLLI_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.3018676638603	3	416.300215	1245.87882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.34	1	101.34	100.84	101.84	0								0	0	0	0.63775	1	42434	42434		0	0	1		+		25728	11147	12700	12755	29569	29569					0.26571196883696757
PLVKIIPKLLI	11	Unmodified	_PLVKIIPKLLI_					0	0	0			REV__nc|ENSG00000175216|Q14008-2|CKAP5	REV__nc|ENSG00000175216|Q14008-2|CKAP5	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.3018066287041	3	416.300215	1245.87882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.22	1	101.39	100.89	101.89	0.17032								0	0	0	0.63775	1	42593	42593		0	0	1		+		25729	11147	12700	12755	29570	29570					0.26571196883696757
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.535	1	66.535	66.035	67.035	0								0	0	0	0.66254	1	27713	27713		0.15932	0	1		+		25730	13400	12701	12756	29571	29571					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.952	1	66.952	66.452	67.452	0								0	0	0	0.66254	1	27884	27884		0.15932	0	1		+		25731	13400	12701	12756	29572	29572					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532836794853	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.625	1	67.625	67.125	68.125	0								0	0	0	0.66254	1	28167	28167		0.15932	0	1		+		25732	13400	12701	12756	29573	29573					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.842	1	67.842	67.342	68.342	0								0	0	0	0.66254	1	28257	28257		0.15932	0	1		+		25733	13400	12701	12756	29574	29574					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.07	1	68.07	67.57	68.57	0								0	0	0	0.66254	1	28349	28349		0.15932	0	1		+		25734	13400	12701	12756	29575	29575					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.789	1	68.789	68.289	69.289	0								0	0	0	0.66254	1	28646	28646		0.15932	0	1		+		25735	13400	12701	12756	29576	29576					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.979	1	68.979	68.479	69.479	0								0	0	0	0.66254	1	28726	28726		0.15932	0	1		+		25736	13400	12701	12756	29577	29577					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.954	1	69.954	69.454	70.454	0								0	0	0	0.66254	1	29128	29128		0.15932	0	1		+		25737	13400	12701	12756	29578	29578					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.74	1	70.74	70.24	71.24	0								0	0	0	0.66254	1	29465	29465		0.15932	0	1		+		25738	13400	12701	12756	29579	29579					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.929	1	70.929	70.429	71.429	0								0	0	0	0.66254	1	29542	29542		0.15932	0	1		+		25739	13400	12701	12756	29580	29580					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533141970634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.832	1	72.832	72.332	73.332	0								0	0	0	0.66254	1	30323	30323		0.15932	0	1		+		25740	13400	12701	12756	29581	29581					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.271	1	75.271	74.771	75.771	0								0	0	0	0.66254	1	31337	31337		0.15932	0	1		+		25741	13400	12701	12756	29582	29582					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.463	1	75.463	74.963	75.963	0								0	0	0	0.66254	1	31415	31415		0.15932	0	1		+		25742	13400	12701	12756	29583	29583					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532531619072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.49	1	76.49	75.99	76.99	0								0	0	0	0.66254	1	31845	31845		0.15932	0	1		+		25743	13400	12701	12756	29584	29584					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.583	1	76.583	76.083	77.083	0								0	0	0	0.66254	1	31883	31883		0.15932	0	1		+		25744	13400	12701	12756	29585	29585					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.896	1	77.896	77.396	78.396	0								0	0	0	0.66254	1	32429	32429		0.15932	0	1		+		25745	13400	12701	12756	29586	29586					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2532836794853	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.992	1	77.992	77.492	78.492	0								0	0	0	0.66254	1	32468	32468		0.15932	0	1		+		25746	13400	12701	12756	29587	29587					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2536498904228	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.529	1	85.529	85.029	86.029	0								0	0	0	0.66254	1	35636	35636		0.15932	0	1		+		25747	13400	12701	12756	29588	29588					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2539245486259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.754	1	88.754	88.254	89.254	0								0	0	0	0.66254	1	37106	37106		0.15932	0	1		+		25748	13400	12701	12756	29589	29589					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.622	1	91.622	91.122	92.122	0								0	0	0	0.66254	1	38289	38289		0.15932	0	1		+		25749	13400	12701	12756	29590	29590					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.452	1	94.452	93.952	94.952	0								0	0	0	0.66254	1	39474	39474		0.15932	0	1		+		25750	13400	12701	12756	29591	29591					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2543517947197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.941	1	94.941	94.441	95.441	0								0	0	0	0.66254	1	39678	39678		0.15932	0	1		+		25751	13400	12701	12756	29592	29592					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2546874880791	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.131	1	95.131	94.631	95.631	0								0	0	0	0.66254	1	39756	39756		0.15932	0	1		+		25752	13400	12701	12756	29593	29593					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2542907595634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.222	1	95.222	94.722	95.722	0								0	0	0	0.66254	1	39794	39794		0.15932	0	1		+		25753	13400	12701	12756	29594	29594					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.735	1	49.065	48.565	49.565	0.33034								0	0	0	0.66254	1	20430	20430		0.15932	0	1		+		25754	13400	12701	12756	29595	29595					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.98	1	49.31	48.81	49.81	0.33019								0	0	0	0.66254	1	20533	20533		0.15932	0	1		+		25755	13400	12701	12756	29596	29596					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2545654177666	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.58	1	49.91	49.41	50.41	0.33019								0	0	0	0.66254	1	20777	20777		0.15932	0	1		+		25756	13400	12701	12756	29597	29597					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536804080009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.681	1	50.012	49.512	50.512	0.33019								0	0	0	0.66254	1	20818	20818		0.15932	0	1		+		25757	13400	12701	12756	29598	29598					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.022	1	50.352	49.852	50.852	0.33019								0	0	0	0.66254	1	20958	20958		0.15932	0	1		+		25758	13400	12701	12756	29599	29599					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.269	1	50.597	50.097	51.097	0.32824								0	0	0	0.66254	1	21061	21061		0.15932	0	1		+		25759	13400	12701	12756	29600	29600					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535278201103	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.584	1	53.907	53.407	54.407	0.32283								0	0	0	0.66254	1	22445	22445		0.15932	0	1		+		25760	13400	12701	12756	29601	29601					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539245486259	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.015	1	54.336	53.836	54.836	0.32088								0	0	0	0.66254	1	22624	22624		0.15932	0	1		+		25761	13400	12701	12756	29602	29602					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.111	1	54.431	53.931	54.931	0.32088								0	0	0	0.66254	1	22663	22663		0.15932	0	1		+		25762	13400	12701	12756	29603	29603					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.207	1	54.527	54.027	55.027	0.32088								0	0	0	0.66254	1	22702	22702		0.15932	0	1		+		25763	13400	12701	12756	29604	29604					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2527648806572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.345	1	59.671	59.171	60.171	0.32553								0	0	0	0.66254	1	24869	24869		0.15932	0	1		+		25764	13400	12701	12756	29605	29605					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2533141970634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.44	1	59.766	59.266	60.266	0.32553								0	0	0	0.66254	1	24908	24908		0.15932	0	1		+		25765	13400	12701	12756	29606	29606					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2542907595634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.729	1	60.055	59.555	60.555	0.32553								0	0	0	0.66254	1	25028	25028		0.15932	0	1		+		25766	13400	12701	12756	29607	29607					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538024783134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.767	1	61.095	60.595	61.595	0.32809								0	0	0	0.66254	1	25461	25461		0.15932	0	1		+		25767	13400	12701	12756	29608	29608					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2541992068291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.988	1	61.318	60.818	61.818	0.32974								0	0	0	0.66254	1	25553	25553		0.15932	0	1		+		25768	13400	12701	12756	29609	29609					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2541076540947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.078	1	61.408	60.908	61.908	0.32974								0	0	0	0.66254	1	25591	25591		0.15932	0	1		+		25769	13400	12701	12756	29610	29610					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2541992068291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.179	1	61.509	61.009	62.009	0.32974								0	0	0	0.66254	1	25632	25632		0.15932	0	1		+		25770	13400	12701	12756	29611	29611					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.459	1	61.789	61.289	62.289	0.32974								0	0	0	0.66254	1	25750	25750		0.15932	0	1		+		25771	13400	12701	12756	29612	29612					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.822	1	62.152	61.652	62.652	0.32974								0	0	0	0.66254	1	25903	25903		0.15932	0	1		+		25772	13400	12701	12756	29613	29613					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.576	1	62.906	62.406	63.406	0.32974								0	0	0	0.66254	1	26218	26218		0.15932	0	1		+		25773	13400	12701	12756	29614	29614					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.793	1	63.123	62.623	63.623	0.32974								0	0	0	0.66254	1	26309	26309		0.15932	0	1		+		25774	13400	12701	12756	29615	29615					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539855837822	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.326	1	63.656	63.156	64.156	0.32974								0	0	0	0.66254	1	26530	26530		0.15932	0	1		+		25775	13400	12701	12756	29616	29616					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538635134697	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.911	1	64.24	63.74	64.74	0.32899								0	0	0	0.66254	1	26779	26779		0.15932	0	1		+		25776	13400	12701	12756	29617	29617					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2542297244072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.155	1	64.484	63.984	64.984	0.32899								0	0	0	0.66254	1	26878	26878		0.15932	0	1		+		25777	13400	12701	12756	29618	29618					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.253	1	64.582	64.082	65.082	0.32899								0	0	0	0.66254	1	26918	26918		0.15932	0	1		+		25778	13400	12701	12756	29619	29619					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.349	1	64.678	64.178	65.178	0.32899								0	0	0	0.66254	1	26956	26956		0.15932	0	1		+		25779	13400	12701	12756	29620	29620					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2543517947197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.881	1	98.961	98.461	99.461	0.080376								0	0	0	0.66254	1	41396	41396		0.15932	0	1		+		25780	13400	12701	12756	29621	29621					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2527953982353	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.6	1	38.884	38.384	39.384	1.284								0	0	0	0.66254	1	15785	15785		0.15932	0	1		+		25781	13400	12701	12756	29622	29622					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2531921267509	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.198	1	47.573	47.073	48.073	1.3751								0	0	0	0.66254	1	19350	19350		0.15932	0	1		+		25782	13400	12701	12756	29623	29623					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2529174685478	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.295	1	47.67	47.17	48.17	1.3751								0	0	0	0.66254	1	19390	19390		0.15932	0	1		+		25783	13400	12701	12756	29624	29624					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2535583376884	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.083	1	48.466	47.966	48.966	1.3825								0	0	0	0.66254	1	19717	19717		0.15932	0	1		+		25784	13400	12701	12756	29625	29625					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2540771365166	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.34	1	48.722	48.222	49.222	1.3825								0	0	0	0.66254	1	19822	19822		0.15932	0	1		+		25785	13400	12701	12756	29626	29626					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.435	1	48.817	48.317	49.317	1.3825								0	0	0	0.66254	1	19859	19859		0.15932	0	1		+		25786	13400	12701	12756	29627	29627					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2534362673759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.536	1	48.919	48.419	49.419	1.3825								0	0	0	0.66254	1	19900	19900		0.15932	0	1		+		25787	13400	12701	12756	29628	29628					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2540161013603	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.124	1	49.512	49.012	50.012	1.388								0	0	0	0.66254	1	20145	20145		0.15932	0	1		+		25788	13400	12701	12756	29629	29629					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2544128298759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.222	1	49.609	49.109	50.109	1.388								0	0	0	0.66254	1	20184	20184		0.15932	0	1		+		25789	13400	12701	12756	29630	29630					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2533752322197	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.208	1	49.184	48.684	49.684	1.976								0	0	0	0.66254	1	19772	19772		0.15932	0	1		+		25790	13400	12701	12756	29631	29631					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2540466189384	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.971	1	49.949	49.449	50.449	1.9772								0	0	0	0.66254	1	20092	20092		0.15932	0	1		+		25791	13400	12701	12756	29632	29632					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532836794853	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.314	1	50.291	49.791	50.791	1.9772								0	0	0	0.66254	1	20237	20237		0.15932	0	1		+		25792	13400	12701	12756	29633	29633					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2531310915947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.439	1	50.416	49.916	50.916	1.9772								0	0	0	0.66254	1	20289	20289		0.15932	0	1		+		25793	13400	12701	12756	29634	29634					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.651	1	50.628	50.128	51.128	1.9772								0	0	0	0.66254	1	20378	20378		0.15932	0	1		+		25794	13400	12701	12756	29635	29635					0.20175288004134018
PLVPLLLLLP	10	Unmodified	_PLVPLLLLLP_					0	0	0			REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	REV__ENST00000487459.5_1_7:116660277-116660439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532226443291	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.406	1	54.379	53.879	54.879	1.9722								0	0	0	0.66254	1	21958	21958		0.15932	0	1		+		25795	13400	12701	12756	29636	29636					0.20175288004134018
PLVQATAL	8	Unmodified	_PLVQATAL_					0	0	0		nc|ENSG00000102290|Q9BZA7-5|PCDH11X;nc|ENSG00000102290|Q9BZA7-4|PCDH11X;nc|ENSG00000102290|Q9BZA7-3|PCDH11X;nc|ENSG00000102290|Q9BZA7-8|PCDH11X;ENSG00000102290|ENST00000682573|PCDH11X	nc|ENSG00000102290|Q9BZA7-5|PCDH11X	nc|ENSG00000102290|Q9BZA7-5|PCDH11X	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	812.4850341677666	1	812.48763	811.480354	1.7976	0.0014605	-2.3427	-0.0019034	-0.54508	-0.00044287	812.4856761766657	78.276	0.41414	78.585	78.355	78.769	0.30933					19	12	2	0	0	0	0.89176	1	32717	32717		0.79363	0	1	1236500			25796	1386	12702	12757	29637	29637					0.06707301357062079
PLVVAHIP	8	Unmodified	_PLVVAHIP_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	423.3109924197197	2	423.265813	844.517074	3.1131	0.0013177	-2.2432	-0.00094945	0.86993	0.00036821	423.2649409544291	106.18	0.12762	106.34	106.26	106.39	0.15781					13	6	3	0	0	0	2.3239	1	45383	45383		0	0	1	16272000	+		25797	11657	12703	12758	29638	29638					0.08859597973639666
PLVVAHIP	8	Unmodified	_PLVVAHIP_					0	0	0			REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	REV__nc|ENSG00000197114|Q8N5A5-4|ZGPAT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	423.3103820681572	2	423.265813	844.517074	3.2471	0.0013744	-2.2581	-0.00095579	0.98896	0.00041859	423.26488400464405	106.15	0.12511	106.32	106.26	106.38	0.16174					14	6	3	0	0	0	2.3239	1	45302	45302		0.79363	0	1	16435000	+		25798	11657	12703	12758	29639	29639					0.08859597973639666
PLVVKKFVI	9	Unmodified	_PLVVKKFVI_					0	0	0			REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2372924685478	3	348.238956	1041.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.062	1	79.062	78.562	79.562	0								0	0	0	0.42693	1	32916	32916		0.26902	0	1		+		25799	8310	12704	12759	29640	29640					0.17585848172848273
PLVVKKFVI	9	Unmodified	_PLVVKKFVI_					0	0	0			REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2354003787041	3	348.238956	1041.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.735	1	94.735	94.235	95.235	0								0	0	0	0.42693	1	39593	39593		0.26902	0	1		+		25800	8310	12704	12759	29641	29641					0.17585848172848273
PLVVKKFVI	9	Unmodified	_PLVVKKFVI_					0	0	0			REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	REV__chr20:8114573-8150294|319|13.27|0.08|7.3|+|ENST00000625874|PLCB1,PLCB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2394592165947	3	348.238956	1041.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.962	1	94.962	94.462	95.462	0								0	0	0	0.42693	1	39687	39687		0.26902	0	1		+		25801	8310	12704	12759	29642	29642					0.17585848172848273
PLVVKVPTV	9	Unmodified	_PLVVKVPTV_					0	0	0			REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.8794433474541	3	317.879428	950.616454	-0.33056	-0.00010508	0.30452	9.6801E-05	-0.026035	-8.276E-06	317.8795812136199	18.005	0.49461	19.453	19.234	19.728	1.448					24	16	2	0	0	0	0.84531	1	7537	7537		1.1933	0	1	931000	+		25802	13450	12705	12760	29643	29643					0.13916995867748483
PLVVKVPTV	9	Unmodified	_PLVVKVPTV_					0	0	0			REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	317.879428	950.616454	-0.63878	-0.00020306	-2.3413	-0.00074424	-2.98	-0.00094729	317.87876100985443	18.486	0.11909	19.465	19.415	19.534	0.97922	-0.046553	-0.0010908	NaN	1.1933	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360810	+		25803	13450	12705	12760							0.13916995867748483
PLVVKVPTV	9	Unmodified	_PLVVKVPTV_					0	0	0			REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	REV__ENST00000493646.1_1_10:102746302-102746494:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	317.879428	950.616454	-0.33056	-0.00010508	0.30452	9.6801E-05	-0.026035	-8.276E-06	317.8795812136199	18.005	0.49461	19.453	19.234	19.728	1.448	-0.059328	0.0014323	NaN	1.1933	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	931000	+		25804	13450	12705	12760							0.13916995867748483
PLWLRCRG	8	Unmodified	_PLWLRCRG_					0	0	0			REV__ENST00000393067.7_1_11:111250173-111250392:-|nuORF	REV__ENST00000393067.7_1_11:111250173-111250392:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1862670779228	3	334.18849	999.54364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.412	1	77.412	76.912	77.912	0								0	0	0	1.0178	1	32226	32226		0.40072	0	1		+		25805	12808	12706	12761	29644	29644					0.04384963593338398
PLWLRCRG	8	Unmodified	_PLWLRCRG_					0	0	0			REV__ENST00000393067.7_1_11:111250173-111250392:-|nuORF	REV__ENST00000393067.7_1_11:111250173-111250392:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1867553591728	3	334.18849	999.54364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.904	1	77.904	77.404	78.404	0								0	0	0	1.0178	1	32432	32432		0.40072	0	1		+		25806	12808	12706	12761	29645	29645					0.04384963593338398
PLYASVSLY	9	Unmodified	_PLYASVSLY_					0	0	0		chr17:44356588-44358945|359|10.1|0.45|4.48|-|ENST00000588067|FAM171A2,FAM171A2;ENST00000592560.1_1_17:42436899-42441082:-|nuORF;ENSG00000161682|ENST00000293443|FAM171A2	chr17:44356588-44358945|359|10.1|0.45|4.48|-|ENST00000588067|FAM171A2,FAM171A2	chr17:44356588-44358945|359|10.1|0.45|4.48|-|ENST00000588067|FAM171A2,FAM171A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7728149294853	2	506.771126	1011.5277	1.2652	0.00064118	0.68196	0.0003456	1.9472	0.00098678	506.77146743706186	67.236	0.7404	69.125	68.797	69.538	1.8889					81	23	5	0	0	0	0.13437	1	28120	28120		40.449	4.4044	1	84871000			25807	216	12707	12762	29646	29646					0.022395358374296848
PLYNYSLFT	9	Unmodified	_PLYNYSLFT_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|77|3|sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|77|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2811157107353	2	559.281857	1116.54916	1.159	0.00064822	-2.3358	-0.0013064	-1.1768	-0.00065816	559.280743292785	39.498	0.27839	39.498	39.328	39.606	0					13	8	2	0	0	0	0.5697	1	16565	16565		12.532	1.7076	1	1069000	+		25808	14198	12708	12763	29647	29647					-0.004450791338513227
PLYPELYEWLR	11	Unmodified	_PLYPELYEWLR_					0	0	0			REV__ENSG00000111816|ENST00000606080|FRK	REV__ENSG00000111816|ENST00000606080|FRK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.5956298708916	3	493.594127	1477.76055	1.2563	0.0006201	1.9116	0.00094354	3.1678	0.0015636	493.5948266364334	20.137	0.31583	20.347	20.219	20.535	0.21024					22	9	3	0	0	0	1.0362	1	8368	8368		1.3296	0.11481	1	609480	+		25809	9343	12709	12764	29648	29648					0.04078172837216698
PLYRVIISLSY	11	Unmodified	_PLYRVIISLSY_					0	0	0			REV__tr|A0A553SQN0|A0A553SQN0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08000PE=4SV=1	REV__tr|A0A553SQN0|A0A553SQN0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08000PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.9486266970634	4	331.697232	1322.75982	-0.01369	-4.5408E-06	2.4556	0.00081453	2.442	0.00080999	331.94857286694463	38.004	0.32262	39.288	39.172	39.494	1.284					32	11	4	0	0	0	1.0362	1	15956	15956		1.3296	0.21989	1	6482400	+		25810	15133	12710	12765	29649	29649					0.11135378188214418
PLYVVDKPVP	10	Unmodified	_PLYVVDKPVP_					0	0	0		nc|ENSG00000112655|Q13308-3|PTK7;chr6:43132687-43141668|408|15.38|0.92|4.06|+|ENST00000349241|PTK7,PTK7;nc|ENSG00000112655|Q13308-2|PTK7;ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;nc|ENSG00000112655|Q13308-5|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1126.654711902142	1	1126.65067	1125.6434	3.8414	0.004328	0.1621	0.00018263	4.0035	0.0045106	1126.6497766121943	101.19	0.20543	101.25	101.12	101.33	0.067009					17	6	4	0	0	0	0.85124	1	42355	42355		6.7232	0.51738	1	68616000			25811	275	12711	12766	29650	29650					0.08560059688284127
PLYVVDKPVP	10	Unmodified	_PLYVVDKPVP_					0	0	0		nc|ENSG00000112655|Q13308-3|PTK7;chr6:43132687-43141668|408|15.38|0.92|4.06|+|ENST00000349241|PTK7,PTK7;nc|ENSG00000112655|Q13308-2|PTK7;ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;nc|ENSG00000112655|Q13308-5|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1126.654589831829	1	1126.65067	1125.6434	2.7799	0.003132	0.64973	0.00073202	3.4296	0.003864	1126.6511456293808	101.08	0.20432	101.26	101.13	101.34	0.18047					18	6	4	0	0	0	0.85124	1	42512	42512		6.7232	0	1	164950000			25812	275	12711	12766	29651	29651					0.08560059688284127
PMEIGLPRLL	10	Unmodified	_PMEIGLPRLL_					0	0	0			REV__PIPOX|p.H255Qfs*13|1|0.17|ENSG00000179761|chr17:29054649-29054649|C/-|frameshift_variant	REV__PIPOX|p.H255Qfs*13|1|0.17|ENSG00000179761|chr17:29054649-29054649|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2288085818291	3	380.22661	1137.658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.856	1	78.165	77.665	78.665	0.30933								0	0	0	0.66222	1	32556	32556		0.69767	0	1		+		25813	11282	12712	12767	29652	29652					0.09467808564772895
PMEIGLPRLL	10	Unmodified	_PMEIGLPRLL_					0	0	0			REV__PIPOX|p.H255Qfs*13|1|0.17|ENSG00000179761|chr17:29054649-29054649|C/-|frameshift_variant	REV__PIPOX|p.H255Qfs*13|1|0.17|ENSG00000179761|chr17:29054649-29054649|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2283508181572	3	380.22661	1137.658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.993	1	80.728	80.228	81.228	1.735								0	0	0	0.66218	1	33130	33130		0.77653	0	1		+		25814	11282	12712	12767	29653	29653					0.09467808564772895
PMEWKPYWFRY	11	Unmodified	_PMEWKPYWFRY_					0	0	0			REV__nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	REV__nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	801.8846923708916	2	801.881747	1601.74894	3.0175	0.0024197	0.84718	0.00067934	3.8647	0.003099	801.8829146263698	72.844	1.404	74.174	73.762	75.166	1.3297					126	44	5	0	0	0	1.0174	2	30567	30567;30619		2.7352	1.0826	1	9142100	+		25815	11298	12713	12768	29654;29655	29654					-0.02786347457777083
PMEWKPYWFRY	11	Unmodified	_PMEWKPYWFRY_					0	0	0			REV__nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	REV__nc|ENSG00000180481|Q4G1C9-5|GLIPR1L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	801.8848754763603	2	801.881747	1601.74894	2.3418	0.0018779	1.37	0.0010985	3.7118	0.0029764	801.8831310182152	72.434	1.3768	74.244	73.861	75.238	1.8101					113	43	4	0	0	0	1.0174	1	30448	30448		2.7352	1.0826	1	9168800	+		25816	11298	12713	12768	29656	29656					-0.02786347457777083
PMGKSMLVLL	10	Unmodified	_PMGKSMLVLL_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2;ENSG00000167244|ENST00000416167|IGF2;chr11:2135529-2140857|279|69.0|0.32|7.76|-|ENST00000381389|INS-IGF2,IGF2;nc|ENSG00000167244|P01344-2|IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8151733279228	2	544.813956	1087.61336	1.1388	0.00062041	-0.35051	-0.00019096	0.78825	0.00042945	544.814096962276	56.582	0.64689	57.996	57.753	58.4	1.4145					60	20	4	0	0	0	0.4341	1	23790	23790		31.268	1.4278	1	10321000			25817	184	12714	12769	29657	29657					0.07305661427085397
PMGKSMLVLL	10	Unmodified	_PMGKSMLVLL_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2;ENSG00000167244|ENST00000416167|IGF2;chr11:2135529-2140857|279|69.0|0.32|7.76|-|ENST00000381389|INS-IGF2,IGF2;nc|ENSG00000167244|P01344-2|IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8138305544853	2	544.813956	1087.61336	1.0459	0.00056981	-0.97951	-0.00053365	0.066377	3.6163E-05	544.813452967798	55.932	0.71544	57.901	57.618	58.334	1.9684					60	23	4	0	0	0	0.37288	1	23538	23538		34.932	0	1	10305000			25818	184	12714	12769	29658	29658					0.07305661427085397
PMGYRAGLI	9	Unmodified	_PMGYRAGLI_					0	0	0			REV__nc|ENSG00000127334|Q92630-2|DYRK2	REV__nc|ENSG00000127334|Q92630-2|DYRK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2662536501884	2	489.265487	976.516422	1.5909	0.00077835	-0.75371	-0.00036876	0.83715	0.00040959	489.26511946810484	38.371	0.75948	39.667	39.184	39.943	1.2961					47	26	2	0	0	0	0.24063	1	16153	16153		28.487	2.1456	1	54622000	+		25819	9713	12715	12770	29659	29659					0.02722435262307954
PMIEFKLF	8	Unmodified	_PMIEFKLF_					0	0	0		tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.1910278201103	3	342.189385	1023.54633	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.82	1	104.87	104.37	105.37	0.056801								0	0	0	1.0178	1	44300	44300		0.45834	0	1				25820	17081	12716	12771	29660	29660					0.03549374207636902
PMKNGMHG	8	Unmodified	_PMKNGMHG_					0	0	0			REV__nc|ENSG00000145244|Q9Y5Q5-2|CORIN	REV__nc|ENSG00000145244|Q9Y5Q5-2|CORIN	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.1993896365166	2	436.19929	870.384028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.827	1	100.02	99.525	100.52	0.19767								0	0	0	1.0178	1	42020	42020		0.79363	0	1		+		25821	10270	12717	12772	29661	29661					-0.056349127461430726
PMLIILSSLKH	11	Unmodified	_PMLIILSSLKH_					0	0	0			REV__ENST00000419794.1_1_9:34318953-34319253:+|nuORF	REV__ENST00000419794.1_1_9:34318953-34319253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6927368044853	4	313.692793	1250.74206	0.46248	0.00014508	-0.39011	-0.00012237	0.072369	2.2702E-05	313.6925895170379	30.427	0.73331	30.713	30.501	31.234	0.2859					103	24	5	0	0	0	1.0156	1	12759	12759		2.8433	0	1	22074000	+		25822	10365	12718	12773	29662	29662					0.1267233966166259
PMLIILSSLKH	11	Unmodified	_PMLIILSSLKH_					0	0	0			REV__ENST00000419794.1_1_9:34318953-34319253:+|nuORF	REV__ENST00000419794.1_1_9:34318953-34319253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6924621462822	4	313.692793	1250.74206	0.084014	2.6354E-05	-1.2423	-0.0003897	-1.1583	-0.00036335	313.6923345218594	28.733	0.81334	30.532	30.206	31.02	1.7987					89	26	5	0	0	0	1.0224	1	11968	11968		2.4348	1.3633	1	20859000	+		25823	10365	12718	12773	29663	29663					0.1267233966166259
PMLILQSAL	9	Unmodified	_PMLILQSAL_					0	0	0			REV__ENST00000433847.2_1_12:9067399-9086462:+|nuORF	REV__ENST00000433847.2_1_12:9067399-9086462:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1959106326103	3	329.196539	984.567789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.6	1	70.6	70.1	71.1	0								0	0	0	0.42693	1	29405	29405		1.1933	0	1		+		25824	9341	12719	12774	29664	29664					0.07488759236332498
PMLLILLLPKR	11	Unmodified	_PMLLILLLPKR_					0	0	0			REV__ENST00000452532.1_1_X:55934878-55934956:+|nuORF	REV__ENST00000452532.1_1_X:55934878-55934956:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.0081664919853	4	327.471535	1305.85703	0.25972	8.505E-05	-0.73896	-0.00024199	-0.47924	-0.00015694	327.4712679532234	25.523	0.15304	25.775	25.705	25.858	0.25197					6	4	2	0	0	0	0.14606	1	10658	10658		0.094841	0	1	86575	+		25825	13143	12720	12775	29665	29665					0.21634068863454559
PMLLLVFK	8	Unmodified	_PMLLLVFK_					0	0	0		ENST00000392952.7_1_10:116194658-116195159:-|nuORF	ENST00000392952.7_1_10:116194658-116195159:-|nuORF	ENST00000392952.7_1_10:116194658-116195159:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.8020507693291	2	480.801174	959.587796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.198	1	79.198	78.698	79.698	0								0	0	0	1.0178	1	32975	32975		0.79363	0	1				25826	6264	12721	12776	29666	29666					0.1063855496696533
PMLRKPGK	8	Unmodified	_PMLRKPGK_					0	0	0		nc|ENSG00000158321|Q8WXX7-5|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	309.5245544314384	3	309.52499	925.553142	-3.0525	-0.00094482	1.8308	0.00056669	-1.2216	-0.00037812	309.52552088418463	22.911	0.41875	22.911	22.75	23.169	0					43	13	4	0	0	0	0.88791	1	9548	9548		3.9444	0	1	10779000			25827	3499	12722	12777	29667	29667					0.08738731878861472
PMLRKPGK	8	Unmodified	_PMLRKPGK_					0	0	0		nc|ENSG00000158321|Q8WXX7-5|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	309.5242797732353	3	309.52499	925.553142	-2.9262	-0.00090572	1.0341	0.00032007	-1.8921	-0.00058565	309.5252615102884	25.795	0.49223	25.795	25.503	25.995	0					47	15	4	0	0	0	0.89152	1	10757	10757		1.6526	0	1	12676000			25828	3499	12722	12777	29668	29668					0.08738731878861472
PMLRKPGK	8	Unmodified	_PMLRKPGK_					0	0	0		nc|ENSG00000158321|Q8WXX7-5|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	309.5243408083916	3	309.52499	925.553142	-0.19498	-6.0351E-05	-1.4659	-0.00045375	-1.6609	-0.0005141	309.5244840343852	21.859	0.6942	23.036	22.476	23.17	1.177					52	22	4	0	0	0	0.89152	2	9083	9083;9136		1.6526	0	1	8343700			25829	3499	12722	12777	29669;29670	29669					0.08738731878861472
PMLRKPGK	8	Unmodified	_PMLRKPGK_					0	0	0		nc|ENSG00000158321|Q8WXX7-5|AUTS2;nc|ENSG00000158321|Q8WXX7-2|AUTS2;ENSG00000158321|ENST00000342771|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	nc|ENSG00000158321|Q8WXX7-5|AUTS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5244933962822	3	309.52499	925.553142	-0.15767	-4.8802E-05	-1.4088	-0.00043605	-1.5665	-0.00048486	309.5245172116971	22.706	0.2985	24.357	24.231	24.53	1.6511					22	9	3	0	0	0	0.89152	1	9484	9484		1.6526	0	1	8110700			25830	3499	12722	12777	29671	29671					0.08738731878861472
PMMLVWFPS	9	Unmodified	_PMMLVWFPS_					0	0	0			REV__ENST00000287706.7_1_16:15141723-15141856:-|nuORF	REV__ENST00000287706.7_1_16:15141723-15141856:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	553.7861205935478	2	554.271924	1106.52929	4.0531	0.0022465	0.11892	6.5912E-05	4.172	0.0023124	554.2720071808649	91.49	0.43282	92.461	92.28	92.712	0.97109					26	13	3	0	0	0	0.116	1	38461	38461		9.3474	0	1	767870	+		25831	12274	12723	12778	29672	29672					-0.019708696698216954
PMPAAKRY	8	Unmodified	_PMPAAKRY_					0	0	0		nc|ENSG00000158816|Q5TIE3-3|VWA5B1;nc|ENSG00000158816|Q5TIE3-4|VWA5B1;nc|ENSG00000158816|Q5TIE3-5|VWA5B1;ENSG00000158816|ENST00000289815|VWA5B1;nc|ENSG00000158816|Q5TIE3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	nc|ENSG00000158816|Q5TIE3-3|VWA5B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2541992068291	2	467.25238	932.490207	3.9364	0.0018393	-0.39084	-0.00018262	3.5455	0.0016566	467.2521800790549	97.239	0.14786	97.524	97.422	97.57	0.28442					11	4	4	0	0	0	0.89176	1	40906	40906		0.79363	0	1	17120000			25832	3509	12724	12779	29673	29673					0.021261660908180602
PMRRLHKRK	9	Unmodified	_PMRRLHKRK_					0	0	0		ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant;ZBTB5|p.E316Lfs*22|1|0.23|ENSG00000168795|chr9:37441606-37441607|-/CACTTGGTGAACCAGCCCCATTGAGCCCTGCTCAG|frameshift_variant;ENSG00000168795|ENST00000307750|ZBTB5	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	407.9206420779228	3	407.920626	1220.74005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.18354	1	0.34198	-0.15802	0.84198	0.15844								0	0	0	0.42693	1	75	75		0	0	1				25833	4053	12725	12780	29674	29674					0.1385076848710014
PMRRLHKRK	9	Unmodified	_PMRRLHKRK_					0	0	0		ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant;ZBTB5|p.E316Lfs*22|1|0.23|ENSG00000168795|chr9:37441606-37441607|-/CACTTGGTGAACCAGCCCCATTGAGCCCTGCTCAG|frameshift_variant;ENSG00000168795|ENST00000307750|ZBTB5	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	407.9204589724541	3	407.920626	1220.74005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.15193	1	0.88771	0.38771	1.3877	0.73579								0	0	0	0.42693	1	62	62		0	0	1				25834	4053	12725	12780	29675	29675					0.1385076848710014
PMRRLHKRK	9	Unmodified	_PMRRLHKRK_					0	0	0		ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant;ZBTB5|p.E316Lfs*22|1|0.23|ENSG00000168795|chr9:37441606-37441607|-/CACTTGGTGAACCAGCCCCATTGAGCCCTGCTCAG|frameshift_variant;ENSG00000168795|ENST00000307750|ZBTB5	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	ZBTB5|p.Q195R|1|0.15|ENSG00000168795|chr9:37441968-37441968|T/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	407.9204284548759	3	407.920626	1220.74005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.2592	1	0.99499	0.49499	1.495	0.73579								0	0	0	0.42693	1	106	106		0	0	1				25835	4053	12725	12780	29676	29676					0.1385076848710014
PMTVAMLL	8	Unmodified	_PMTVAMLL_					0	0	0		nc|ENSG00000163738|Q9H903-2|MTHFD2L;nc|ENSG00000163738|Q9H903-1|MTHFD2L;nc|ENSG00000163738|Q9H903-5|MTHFD2L;ENSG00000163738|ENST00000325278|MTHFD2L	nc|ENSG00000163738|Q9H903-2|MTHFD2L	nc|ENSG00000163738|Q9H903-2|MTHFD2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	875.4703246951103	1	875.472908	874.465632	1.4946	0.0013085	-0.75903	-0.00066451	0.73562	0.00064401	875.4717604835686	77.102	0.25681	78.854	78.721	78.977	1.7514					9	7	2	0	0	0	0.47134	1	32325	32325		49.669	0	1	740590			25836	3718	12726	12781	29677	29677					0.023377698930744373
PMVASTYLI	9	Unmodified	_PMVASTYLI_					0	0	0			REV__ENSG00000204694|ENST00000377149|OR11A1	REV__ENSG00000204694|ENST00000377149|OR11A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7665893435478	2	497.767529	993.520504	1.4419	0.00071774	-3.6364	-0.0018101	-2.1944	-0.0010923	497.7660475135225	80.438	0.56882	82.155	81.908	82.477	1.7167					34	18	3	0	0	0	0.54523	1	33760	33760		13.508	0	1	3153700	+		25837	11799	12727	12782	29678	29678					0.023484799653374466
PMVMLCIL	8	Unmodified	_PMVMLCIL_					0	0	0			REV__ENST00000373616.9_1_6:36935956-36936193:-|nuORF	REV__ENST00000373616.9_1_6:36935956-36936193:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	307.1650573611259	3	307.165306	918.474088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.14	1	105.3	104.8	105.8	0.15859								0	0	0	1.0178	1	44712	44712		1.8442	0	1		+		25838	12698	12728	12783	29679	29679					0.011590005380639923
PNAKAAPI	8	Unmodified	_PNAKAAPI_					0	0	0			REV__tr|A0A553SHC4|A0A553SHC4_NIACILargeribosomalsubunitproteinuL11OS=NialliacirculansOX=1397GN=rplKPE=3SV=1	REV__tr|A0A553SHC4|A0A553SHC4_NIACILargeribosomalsubunitproteinuL11OS=NialliacirculansOX=1397GN=rplKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2328369021416	2	391.231971	780.449388	3.0502	0.0011933	-0.61996	-0.00024255	2.4303	0.00095079	391.2315640101365	104.43	0.091827	104.61	104.54	104.63	0.1731					14	4	4	0	0	0	0.89008	1	44174	44174		2.5775	0	1	56591000	+		25839	14787	12729	12784	29680	29680					0.050381480428427494
PNAKALAP	8	Unmodified	_PNAKALAP_					0	0	0			REV__nc|ENSG00000039600|O94993-2|SOX30	REV__nc|ENSG00000039600|O94993-2|SOX30	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2330200076103	2	391.231971	780.449388	2.7644	0.0010815	0.37665	0.00014736	3.141	0.0012289	391.23197598005044	104.48	0.089691	104.54	104.5	104.59	0.056801					9	4	3	0	0	0	0.89008	1	44077	44077		2.5775	0	1	37567000	+		25840	8594	12730	12785	29681	29681					0.05038148042854118
PNAKALAP	8	Unmodified	_PNAKALAP_					0	0	0			REV__nc|ENSG00000039600|O94993-2|SOX30	REV__nc|ENSG00000039600|O94993-2|SOX30	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2328369021416	2	391.231971	780.449388	2.551	0.00099804	0.41524	0.00016246	2.9663	0.0011605	391.2319400228054	104.47	0.093407	104.63	104.56	104.66	0.16055					14	4	4	0	0	0	0.89008	1	44253	44253		2.5775	0	1	49377000	+		25841	8594	12730	12785	29682	29682					0.05038148042854118
PNAKALAP	8	Unmodified	_PNAKALAP_					0	0	0			REV__nc|ENSG00000039600|O94993-2|SOX30	REV__nc|ENSG00000039600|O94993-2|SOX30	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	391.231971	780.449388	2.7644	0.0010815	0.37665	0.00014736	3.141	0.0012289	391.23197598005044	104.48	0.089691	104.54	104.5	104.59	0.056801	-0.051206	0.00027211	NaN	2.5775	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37567000	+		25842	8594	12730	12785							0.05038148042854118
PNAKALAP	8	Unmodified	_PNAKALAP_					0	0	0			REV__nc|ENSG00000039600|O94993-2|SOX30	REV__nc|ENSG00000039600|O94993-2|SOX30	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	391.231971	780.449388	2.551	0.00099804	0.41524	0.00016246	2.9663	0.0011605	391.2319400228054	104.47	0.093407	104.63	104.56	104.66	0.16055	0.035559	0.00030231	NaN	2.5775	14	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	49377000	+		25843	8594	12730	12785							0.05038148042854118
PNAKALAP	8	Unmodified	_PNAKALAP_					0	0	0			REV__nc|ENSG00000039600|O94993-2|SOX30	REV__nc|ENSG00000039600|O94993-2|SOX30	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	391.231971	780.449388	3.0502	0.0011933	-0.61996	-0.00024255	2.4303	0.00095079	391.2315640101365	104.43	0.091827	104.61	104.54	104.63	0.1731	0.015647	-0.0005077	NaN	2.5775	14	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56591000	+		25844	8594	12730	12785							0.05038148042854118
PNAKKLRIMI	10	Unmodified	_PNAKKLRIMI_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|26|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|26|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|26|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3734619021416	2	592.370818	1182.72708	4.004	0.0023719	0.59518	0.00035257	4.5992	0.0027244	592.3714475055277	82.119	0.3434	83.331	83.13	83.474	1.2125					17	10	2	0	0	0	0.87343	1	34474	34474		4.3292	0	1	708510			25845	7727	12731	12786	29683	29683					0.14302892584350957
PNAKTAIK	8	Unmodified	_PNAKTAIK_					0	0	0			REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7599059939384	2	421.758352	841.502152	0.31095	0.00013115	2.1906	0.00092392	2.5016	0.0010551	421.759732991886	104.54	0.089249	104.54	104.47	104.56	0					9	4	3	0	0	0	0.89008	1	44140	44140		2.5775	0	1	30452000	+		25846	8627	12732	12787	29684	29684					0.07506106105665822
PNAKTAIK	8	Unmodified	_PNAKTAIK_					0	0	0			REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7588989138603	2	421.758352	841.502152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.46	1	104.63	104.13	105.13	0.1731								0	0	0	1.0178	1	44202	44202		2.5775	0	1		+		25847	8627	12732	12787	29685	29685					0.07506106105665822
PNAKTAIK	8	Unmodified	_PNAKTAIK_					0	0	0			REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	421.758352	841.502152	0.31095	0.00013115	2.1906	0.00092392	2.5016	0.0010551	421.759732991886	104.54	0.089249	104.54	104.47	104.56	0	-0.037925	0.0015929	NaN	2.5775	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	30452000	+		25848	8627	12732	12787							0.07506106105665822
PNAKTAIK	8	Unmodified	_PNAKTAIK_					0	0	0			REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	REV__ENST00000492217.1_1_1:19634582-19638531:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	421.758352	841.502152	3.0879	0.0013023	0.21922	9.2458E-05	3.3071	0.0013948	421.7583717990952	104.47	0.11237	104.63	104.56	104.67	0.16055	0.05447	-7.0009E-05	NaN	2.5775	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68507000	+		25849	8627	12732	12787							0.07506106105665822
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.943	1	28.943	28.443	29.443	0								0	0	0	0.42693	1	12114	12114		3.2813	1.2216	1				25850	1117	12733	12788	29686	29686					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1915771365166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.513	1	32.513	32.013	33.013	0								0	0	0	0.42693	1	13621	13621		3.9444	1.8846	1				25851	1117	12733	12788	29687	29687					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1914550662041	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.855	1	32.855	32.355	33.355	0								0	0	0	0.42693	1	13765	13765		3.9444	1.8846	1				25852	1117	12733	12788	29688	29688					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1932250857353	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.933	1	35.933	35.433	36.433	0								0	0	0	0.42693	1	15065	15065		1.6526	0.85899	1				25853	1117	12733	12788	29689	29689					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.939	1	36.939	36.439	37.439	0								0	0	0	0.42693	1	15485	15485		1.6526	0.96225	1				25854	1117	12733	12788	29690	29690					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1908447146416	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.049	1	37.049	36.549	37.549	0								0	0	0	0.42693	1	15531	15531		1.6526	0.96225	1				25855	1117	12733	12788	29691	29691					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1915161013603	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.018	1	38.018	37.518	38.518	0								0	0	0	0.42693	1	15936	15936		3.2813	0.97858	1				25856	1117	12733	12788	29692	29692					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1909667849541	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.245	1	38.245	37.745	38.745	0								0	0	0	0.42693	1	16031	16031		3.2813	0.97858	1				25857	1117	12733	12788	29693	29693					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1914550662041	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.357	1	38.357	37.857	38.857	0								0	0	0	0.42693	1	16078	16078		3.2813	0.97858	1				25858	1117	12733	12788	29694	29694					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1912719607353	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.559	1	38.559	38.059	39.059	0								0	0	0	0.42693	1	16163	16163		1.6526	0.85899	1				25859	1117	12733	12788	29695	29695					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1917602419853	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.973	1	38.973	38.473	39.473	0								0	0	0	0.42693	1	16337	16337		1.6526	0.96225	1				25860	1117	12733	12788	29696	29696					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.241	1	39.241	38.741	39.741	0								0	0	0	0.42693	1	16446	16446		3.2813	1.2216	1				25861	1117	12733	12788	29697	29697					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1917602419853	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.129	1	40.129	39.629	40.629	0								0	0	0	0.42693	1	16815	16815		1.6526	0.85899	1				25862	1117	12733	12788	29698	29698					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.225	1	40.225	39.725	40.725	0								0	0	0	0.42693	1	16854	16854		1.6526	0.96225	1				25863	1117	12733	12788	29699	29699					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1911498904228	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.519	1	40.519	40.019	41.019	0								0	0	0	0.42693	1	16975	16975		1.6526	0.85899	1				25864	1117	12733	12788	29700	29700					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1919433474541	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.654	1	40.654	40.154	41.154	0								0	0	0	0.42693	1	17032	17032		1.6526	0.85899	1				25865	1117	12733	12788	29701	29701					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.768	1	40.768	40.268	41.268	0								0	0	0	0.42693	1	17078	17078		1.6526	0.85899	1				25866	1117	12733	12788	29702	29702					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1910888552666	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.023	1	41.023	40.523	41.523	0								0	0	0	0.42693	1	17182	17182		1.6526	0.85899	1				25867	1117	12733	12788	29703	29703					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.15	1	41.15	40.65	41.65	0								0	0	0	0.42693	1	17234	17234		1.6526	0.85899	1				25868	1117	12733	12788	29704	29704					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1916992068291	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.868	1	48.868	48.368	49.368	0								0	0	0	0.42693	1	20405	20405		1.6526	0.96225	1				25869	1117	12733	12788	29705	29705					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1918823122978	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.085	1	49.085	48.585	49.585	0								0	0	0	0.42693	1	20494	20494		1.6526	0.96225	1				25870	1117	12733	12788	29706	29706					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1915771365166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.422	1	49.422	48.922	49.922	0								0	0	0	0.42693	1	20631	20631		1.6526	0.96225	1				25871	1117	12733	12788	29707	29707					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1916381716728	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.528	1	49.528	49.028	50.028	0								0	0	0	0.42693	1	20674	20674		1.6526	0.96225	1				25872	1117	12733	12788	29708	29708					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1916381716728	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.65	1	49.65	49.15	50.15	0								0	0	0	0.42693	1	20723	20723		1.6526	0.96225	1				25873	1117	12733	12788	29709	29709					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1914550662041	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.749	1	49.749	49.249	50.249	0								0	0	0	0.42693	1	20763	20763		1.6526	0.96225	1				25874	1117	12733	12788	29710	29710					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1919433474541	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.955	1	49.955	49.455	50.455	0								0	0	0	0.42693	1	20846	20846		1.6526	0.96225	1				25875	1117	12733	12788	29711	29711					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1919433474541	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.118	1	50.118	49.618	50.618	0								0	0	0	0.42693	1	20911	20911		1.6526	0.96225	1				25876	1117	12733	12788	29712	29712					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1910888552666	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.236	1	50.236	49.736	50.736	0								0	0	0	0.42693	1	20959	20959		1.6526	0.96225	1				25877	1117	12733	12788	29713	29713					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1914550662041	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.345	1	50.345	49.845	50.845	0								0	0	0	0.42693	1	21003	21003		1.6526	0.96225	1				25878	1117	12733	12788	29714	29714					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1926147341728	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.564	1	63.564	63.064	64.064	0								0	0	0	0.42693	1	26499	26499		1.6526	0.85899	1				25879	1117	12733	12788	29715	29715					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.836	1	63.836	63.336	64.336	0								0	0	0	0.42693	1	26614	26614		1.6526	0.96225	1				25880	1117	12733	12788	29716	29716					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.247	1	64.247	63.747	64.747	0								0	0	0	0.42693	1	26785	26785		1.6526	0.96225	1				25881	1117	12733	12788	29717	29717					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1910888552666	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.121	1	75.121	74.621	75.621	0								0	0	0	0.42693	1	31275	31275		1.6526	0.96225	1				25882	1117	12733	12788	29718	29718					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.931	1	79.931	79.431	80.431	0								0	0	0	0.42693	1	33283	33283		1.6526	0.96225	1				25883	1117	12733	12788	29719	29719					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.097	1	80.097	79.597	80.597	0								0	0	0	0.42693	1	33353	33353		1.6526	0.96225	1				25884	1117	12733	12788	29720	29720					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1918212771416	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.698	1	80.698	80.198	81.198	0								0	0	0	0.42693	1	33603	33603		1.6526	0.96225	1				25885	1117	12733	12788	29721	29721					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1918823122978	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.878	1	80.878	80.378	81.378	0								0	0	0	0.42693	1	33678	33678		1.6526	0.96225	1				25886	1117	12733	12788	29722	29722					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1916992068291	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.985	1	81.985	81.485	82.485	0								0	0	0	0.42693	1	34152	34152		1.6526	0.96225	1				25887	1117	12733	12788	29723	29723					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1915771365166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.446	1	83.446	82.946	83.946	0								0	0	0	0.42693	1	34771	34771		1.6526	0.17072	1				25888	1117	12733	12788	29724	29724					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920654177666	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.442	1	85.442	84.942	85.942	0								0	0	0	0.42693	1	35599	35599		1.6526	0.96225	1				25889	1117	12733	12788	29725	29725					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1924926638603	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.781	1	85.781	85.281	86.281	0								0	0	0	0.42693	1	35741	35741		1.6526	0.96225	1				25890	1117	12733	12788	29726	29726					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1923705935478	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.174	1	86.174	85.674	86.674	0								0	0	0	0.42693	1	35906	35906		1.6526	0.96225	1				25891	1117	12733	12788	29727	29727					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1927368044853	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.279	1	86.279	85.779	86.779	0								0	0	0	0.42693	1	35953	35953		1.6526	0.96225	1				25892	1117	12733	12788	29728	29728					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1928588747978	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.516	1	86.516	86.016	87.016	0								0	0	0	0.42693	1	36055	36055		1.6526	0.96225	1				25893	1117	12733	12788	29729	29729					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1926757693291	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.892	1	87.892	87.392	88.392	0								0	0	0	0.42693	1	36738	36738		1.6526	0.96225	1				25894	1117	12733	12788	29730	29730					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1921874880791	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.04	1	88.04	87.54	88.54	0								0	0	0	0.42693	1	36802	36802		1.6526	0.96225	1				25895	1117	12733	12788	29731	29731					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1923095583916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.238	1	89.238	88.738	89.738	0								0	0	0	0.42693	1	37303	37303		1.6526	0.96225	1				25896	1117	12733	12788	29732	29732					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1921874880791	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.954	1	93.954	93.454	94.454	0								0	0	0	0.42693	1	39264	39264		1.6526	0.96225	1				25897	1117	12733	12788	29733	29733					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1923095583916	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.047	1	94.047	93.547	94.547	0								0	0	0	0.42693	1	39303	39303		1.6526	0.96225	1				25898	1117	12733	12788	29734	29734					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1907836794853	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.522	1	18.695	18.195	19.195	0.17285								0	0	0	0.42693	1	7689	7689		1.4819	0.68827	1				25899	1117	12733	12788	29735	29735					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1915771365166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.301	1	57.622	57.122	58.122	0.32103								0	0	0	0.42693	1	24028	24028		1.6526	0.96225	1				25900	1117	12733	12788	29736	29736					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1918823122978	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.416	1	57.739	57.239	58.239	0.32298								0	0	0	0.42693	1	24076	24076		1.6526	0.96225	1				25901	1117	12733	12788	29737	29737					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1918212771416	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.71	1	66.037	65.537	66.537	0.32689								0	0	0	0.42693	1	27513	27513		1.6526	0.96225	1				25902	1117	12733	12788	29738	29738					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1907836794853	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.418	1	16.244	15.744	16.744	0.82643								0	0	0	0.42693	1	6407	6407		1.6526	0.85899	1				25903	1117	12733	12788	29739	29739					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1896850466728	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.529	1	16.356	15.856	16.856	0.82643								0	0	0	0.42693	1	6454	6454		1.6526	0.85899	1				25904	1117	12733	12788	29740	29740					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1894409060478	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.714	1	16.541	16.041	17.041	0.82643								0	0	0	0.42693	1	6531	6531		1.6526	0	1				25905	1117	12733	12788	29741	29741					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1909667849541	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.603	1	18.501	18.001	19.001	0.89794								0	0	0	0.42693	1	7326	7326		1.6526	0.85899	1				25906	1117	12733	12788	29742	29742					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1906005740166	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.738	1	18.718	18.218	19.218	0.97922								0	0	0	0.42693	1	7384	7384		1.6526	0.85899	1				25907	1117	12733	12788	29743	29743					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1891967654228	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.359	1	37.635	37.135	38.135	1.2762								0	0	0	0.42693	1	15263	15263		1.6526	0.96225	1				25908	1117	12733	12788	29744	29744					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1906616091728	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.772	1	38.048	37.548	38.548	1.2762								0	0	0	0.42693	1	15433	15433		1.6526	0.96225	1				25909	1117	12733	12788	29745	29745					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	533.1918212771416	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.317	1	49.705	49.205	50.205	1.388								0	0	0	0.42693	1	20224	20224		1.6526	0.96225	1				25910	1117	12733	12788	29746	29746					-0.16446538898526342
PNCCDEDNR	9	Unmodified	_PNCCDEDNR_					0	0	0		nc|ENSG00000089091|Q9NVP4-2|DZANK1;nc|ENSG00000089091|Q9NVP4-4|DZANK1;nc|ENSG00000089091|Q9NVP4-5|DZANK1;nc|ENSG00000089091|Q9NVP4|DZANK1;ENSG00000089091|ENST00000699568|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	nc|ENSG00000089091|Q9NVP4-2|DZANK1	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1918823122978	2	533.189848	1064.36514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.717	1	43.609	43.109	44.109	1.8927								0	0	0	0.42693	1	17484	17484		1.6526	0	1				25911	1117	12733	12788	29747	29747					-0.16446538898526342
PNEILLELI	9	Unmodified	_PNEILLELI_					0	0	0			REV__tr|A0A7D6VME1|A0A7D6VME1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_13395PE=4SV=1	REV__tr|A0A7D6VME1|A0A7D6VME1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_13395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3148681521416	2	527.313158	1052.61176	4.1617	0.0021945	0.42299	0.00022305	4.5846	0.0024175	527.3133170978526	91.358	0.63164	92.34	91.974	92.605	0.98157					58	19	4	0	0	0	0.1109	1	38551	38551		45.7	3.86	1	9020000	+		25912	15316	12734	12789	29748	29748					0.08756066934324735
PNEILLELI	9	Unmodified	_PNEILLELI_					0	0	0			REV__tr|A0A7D6VME1|A0A7D6VME1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_13395PE=4SV=1	REV__tr|A0A7D6VME1|A0A7D6VME1_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_13395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.3160888552666	2	527.313158	1052.61176	3.73	0.0019669	1.2186	0.00064258	4.9486	0.0026095	527.3136854224094	90.899	0.60603	92.265	91.929	92.535	1.366					53	18	4	0	0	0	0.086433	1	38349	38349		53.833	5.4869	1	9215900	+		25913	15316	12734	12789	29749	29749					0.08756066934324735
PNIDNFRLT	9	Unmodified	_PNIDNFRLT_					0	0	0		ENSG00000090060|ENST00000216277|PAPOLA;PAPOLA-BTF3|1|fusion;PAPOLA|p.F273Lfs*6|1|0.06|ENSG00000090060|chr14:96532631-96532632|-/A|frameshift_variant;nc|ENSG00000090060|P51003-2|PAPOLA;ENSG00000218823|ENST00000404991|PAPOLB	ENSG00000090060|ENST00000216277|PAPOLA	ENSG00000090060|ENST00000216277|PAPOLA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.8292114138603	2	545.288005	1088.56146	1.2355	0.0006737	-2.2655	-0.0012353	-1.03	-0.00056163	545.286945414801	67.145	0.25092	69.034	68.797	69.048	1.8889					11	7	2	0	0	0	0.097511	1	28073	28073		16.942	6.1184	1	509990			25914	1133	12735	12790	29750	29750					0.020719573291671622
PNKAPSVL	8	Unmodified	_PNKAPSVL_					0	0	0			REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.7479431033134	2	413.245078	824.475603	2.9378	0.001214	4.1398	0.0017108	7.0777	0.0029248	413.24757943594756	104.47	0.36523	104.63	104.42	104.79	0.16055					35	18	3	0	0	0	0.89008	2	44272	44272;44277		2.5775	1.7838	1	44092000	+		25915	8887	12736	12791	29751;29752	29751					0.056344172143212745
PNKAPSVL	8	Unmodified	_PNKAPSVL_					0	0	0			REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	413.7479431033134	2	413.245078	824.475603	2.9378	0.001214	4.1398	0.0017108	7.0777	0.0029248	413.24757943594756	104.47	0.36523	104.63	104.42	104.79	0.16055					35	18	3	0	0	0	2.3239	1	44272	44272		2.5775	1.7838	1	44092000	+		25916	8887	12736	12791	29753	29753					0.056344172143212745
PNKAPSVL	8	Unmodified	_PNKAPSVL_					0	0	0			REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2471496462822	2	413.245078	824.475603	3.1876	0.0013172	1.4234	0.00058821	4.611	0.0019055	413.2457502977199	104.43	0.32478	104.61	104.54	104.87	0.1731					28	16	3	0	0	0	0.89008	1	44185	44185		2.5775	1.7838	1	62000000	+		25917	8887	12736	12791	29754	29754					0.056344172143212745
PNKAPSVL	8	Unmodified	_PNKAPSVL_					0	0	0			REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	REV__ENST00000555324.1_1_14:94545323-94547480:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	413.245078	824.475603	3.1876	0.0013172	1.4234	0.00058821	4.611	0.0019055	413.2457502977199	104.43	0.32478	104.61	104.54	104.87	0.1731	0.01662	-0.0017911	NaN	2.5775	28	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62000000	+		25918	8887	12736	12791							0.056344172143212745
PNKGGGGG	8	Unmodified	_PNKGGGGG_					0	0	0		ENSG00000116017|ENST00000263620|ARID3A	ENSG00000116017|ENST00000263620|ARID3A	ENSG00000116017|ENST00000263620|ARID3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.3127319216728	1	643.315814	642.308538	0.10768	6.9271E-05	-3.7382	-0.0024048	-3.6305	-0.0023356	643.313315692922	17.775	0.23462	18.754	18.584	18.819	0.97922					12	8	2	0	0	0	0.89178	1	7388	7388		0.69038	0	1	491830			25919	1946	12737	12792	29755	29755					-0.026924306105570395
PNKGGGGG	8	Unmodified	_PNKGGGGG_					0	0	0		ENSG00000116017|ENST00000263620|ARID3A	ENSG00000116017|ENST00000263620|ARID3A	ENSG00000116017|ENST00000263620|ARID3A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	643.315814	642.308538	0.12752	8.2034E-05	-5.5997	-0.0036024	-5.4722	-0.0035203	643.3119920871309	17.439	0.22375	18.742	18.616	18.84	1.3023	-0.0060864	-0.00061528	NaN	0.69038	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	509740			25920	1946	12737	12792							-0.026924306105570395
PNKRDQWQ	8	Unmodified	_PNKRDQWQ_					0	0	0			REV__ENST00000485089.5_1_1:167400016-167400061:-|nuORF	REV__ENST00000485089.5_1_1:167400016-167400061:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2732421755791	2	536.270147	1070.52574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.87	1	105.03	104.53	105.53	0.16679								0	0	0	1.0178	1	44480	44480		0.79363	0	1		+		25921	13385	12738	12793	29756	29756					-0.006700801278157087
PNLQLVVL	8	Unmodified	_PNLQLVVL_					0	0	0			REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	895.5645019412041	1	895.56113	894.553853	3.0845	0.0027624	0.2765	0.00024762	3.361	0.00301	895.5609532158436	109.18	0.20274	109.33	109.24	109.44	0.1548					22	9	3	0	0	0	0.89176	1	47289	47289		0.79363	0	1	20656000	+		25922	12407	12739	12794	29757	29757					0.1023584979958514
PNLQLVVL	8	Unmodified	_PNLQLVVL_					0	0	0			REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	REV__ENST00000321276.7_1_2:223423754-223423841:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	895.56113	894.553853	3.0845	0.0027624	0.2765	0.00024762	3.361	0.00301	895.5609532158436	109.18	0.20274	109.33	109.24	109.44	0.1548	-0.011213	-0.00041752	NaN	0.79363	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20656000	+		25923	12407	12739	12794							0.1023584979958514
PNLQVVSL	8	Unmodified	_PNLQVVSL_					0	0	0			REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2604553103447	2	435.258185	868.501818	3.1599	0.0013754	1.6217	0.00070587	4.7816	0.0020812	435.2588844683018	104.51	0.090096	104.57	104.51	104.6	0.056801					7	4	2	0	0	0	0.89008	1	44103	44103		2.5775	0	1	18771000	+		25924	10487	12740	12795	29758	29758					0.06230686385822537
PNLQVVSL	8	Unmodified	_PNLQVVSL_					0	0	0			REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2599059939384	2	435.258185	868.501818	3.3218	0.0014459	1.2667	0.00055134	4.5885	0.0019972	435.2586997147053	104.49	0.072945	104.65	104.6	104.67	0.16055					6	3	2	0	0	0	0.88587	1	44279	44279		5.2307	0	1	34281000	+		25925	10487	12740	12795	29759	29759					0.06230686385822537
PNLQVVSL	8	Unmodified	_PNLQVVSL_					0	0	0			REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	435.258185	868.501818	0.69322	0.00030173	4.5449	0.0019782	5.2381	0.0022799	435.26018646113624	104.54	0.092453	104.54	104.49	104.58	0	-0.048374	0.0020469	NaN	5.2307	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29327000	+		25926	10487	12740	12795							0.06230686385822537
PNLQVVSL	8	Unmodified	_PNLQVVSL_					0	0	0			REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	435.258185	868.501818	3.1599	0.0013754	1.6217	0.00070587	4.7816	0.0020812	435.2588844683018	104.51	0.090096	104.57	104.51	104.6	0.056801	-0.013818	-0.0004978	NaN	5.2307	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18771000	+		25927	10487	12740	12795							0.06230686385822537
PNLQVVSL	8	Unmodified	_PNLQVVSL_					0	0	0			REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	REV__ENST00000463580.5_1_2:95940333-95943708:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	435.258185	868.501818	3.3218	0.0014459	1.2667	0.00055134	4.5885	0.0019972	435.2586997147053	104.49	0.072945	104.65	104.6	104.67	0.16055	0.062193	-0.00080687	NaN	5.2307	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34281000	+		25928	10487	12740	12795							0.06230686385822537
PNMPWFKGWK	10	Unmodified	_PNMPWFKGWK_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886901736259	3	430.886588	1289.63793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.93	1	34.93	34.43	35.43	0								0	0	0	0.66227	1	14640	14640		0.62683	0	1				25929	1331	12741	12796	29760	29760					0.00470057624806941
PNQLTALL	8	Unmodified	_PNQLTALL_					0	0	0		tr|A0A553SS89|A0A553SS89_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02655PE=3SV=1	tr|A0A553SS89|A0A553SS89_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02655PE=3SV=1	tr|A0A553SS89|A0A553SS89_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02655PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2590209841728	2	435.258185	868.501818	3.3228	0.0014463	-0.95625	-0.00041622	2.3666	0.0010301	435.2577963443611	104.45	0.072906	104.62	104.58	104.65	0.1731					6	3	2	0	0	0	0.89008	1	44200	44200		2.5775	0	1	38089000			25930	16597	12742	12797	29761	29761					0.062306863857997996
PNRFRFKIT	9	Unmodified	_PNRFRFKIT_					0	0	0		ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	393.2299987673759	3	393.564614	1177.67201	2.685	0.0010567	0.23932	9.4188E-05	2.9243	0.0011509	393.5648569861734	91.711	0.22776	91.901	91.786	92.014	0.19042					10	6	2	0	0	0	0.11941	1	38448	38448		1.0715	0	1	474750			25931	1138	12743	12798	29762	29762					0.09028222108076989
PNRIFQWMQA	10	Unmodified	_PNRIFQWMQA_					0	0	0			REV__ENST00000545710.1_1_12:9659830-9660388:-|nuORF	REV__ENST00000545710.1_1_12:9659830-9660388:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8877136111259	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.67	1	110.83	110.33	111.33	0.16133								0	0	0	0.6624	1	48053	48053		0.13989	0.056541	1		+		25932	13803	12744	12799	29763	29763					0.0006796813111122901
PNRLRVLKVKE	11	Unmodified	_PNRLRVLKVKE_					0	0	0			REV__ENST00000483208.5_2_15:42646603-42694336:+|nuORF	REV__ENST00000483208.5_2_15:42646603-42694336:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2909728884697	3	451.289261	1350.84595	3.3622	0.0015173	-0.5511	-0.00024871	2.8111	0.0012686	451.28931169764246	105.85	0.13348	106.01	105.92	106.06	0.15859					21	6	4	0	0	0	1.0402	1	45167	45167		0.073264	0	1	68866000	+		25933	8916	12745	12800	29764	29764					0.18456382813565142
PNRRKLKRHK	10	Unmodified	_PNRRKLKRHK_					0	0	0			REV__ENST00000290795.7_1_1:46126652-46126787:-|nuORF	REV__ENST00000290795.7_1_1:46126652-46126787:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.1866332888603	4	333.96664	1331.83745	1.1819	0.00039473	-1.4552	-0.000486	-0.2733	-9.1273E-05	334.21647273687154	48.421	0.20447	48.751	48.616	48.821	0.33034					9	6	2	0	0	0	0.12561	1	20266	20266		0.13989	0.04505	1	568680	+		25934	12280	12746	12801	29765	29765					0.18480873687576604
PNSSQNGSCR	10	Unmodified	_PNSSQNGSCR_					0	0	0		nc|ENSG00000105976|P08581-2|MET;ENSG00000105976|ENST00000397752|MET	nc|ENSG00000105976|P08581-2|MET	nc|ENSG00000105976|P08581-2|MET	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2275268435478	2	525.225079	1048.43561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.588	1	18.486	17.986	18.986	0.89794								0	0	0	0.66087	1	7320	7320		2.9952	0.41776	1				25935	1551	12747	12802	29766	29766					-0.08667497518536038
PNTLADESMF	10	Unmodified	_PNTLADESMF_					0	0	0			REV__ENST00000504768.2_1_5:93246475-93410459:-|nuORF	REV__ENST00000504768.2_1_5:93246475-93410459:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.7513305544853	2	562.750064	1123.48558	0.93775	0.00052772	1.4099	0.00079344	2.3477	0.0013212	562.750775855555	31.921	0.31419	31.921	31.789	32.103	0					15	9	2	0	0	0	0.52861	2	13362	13362;13413		26.268	6.5031	1	1077300	+		25936	9383	12748	12803	29767;29768	29767					-0.07122807633254524
PNWREKLWHKR	11	Unmodified	_PNWREKLWHKR_					0	0	0			REV__ENST00000447036.5_1_2:96068559-96071107:+|nuORF	REV__ENST00000447036.5_1_2:96068559-96071107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6231567263603	3	517.288143	1548.8426	2.2432	0.0011604	3.3534	0.0017347	5.5966	0.0028951	517.6232051607464	50.011	3.141	50.011	48.713	51.854	0					165	100	2	0	0	0	0.99899	2	20811	20811;21046		3.8459	2.6311	1	2915700	+		25937	12934	12749	12804	29769;29770	29769					0.0901313275951452
PPAALGKG	8	Unmodified	_PPAALGKG_					0	0	0		ENST00000399443.7_1_18:21851750-21852050:-|nuORF	ENST00000399443.7_1_18:21851750-21852050:-|nuORF	ENST00000399443.7_1_18:21851750-21852050:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0693847537041	2	355.713414	709.412274	-0.32812	-0.00011672	3.7321	0.0013276	3.404	0.0012109	355.7150184328965	20.778	0.17962	21.903	21.804	21.984	1.1254					8	5	2	0	0	0	2.3239	1	8623	8623		0.79363	0	1	186680			25938	6336	12750	12805	29771	29771					0.045944764970954566
PPAAPGTP	8	Unmodified	_PPAAPGTP_					0	0	0			REV__ENSG00000188021|ENST00000338222|UBQLN2	REV__ENSG00000188021|ENST00000338222|UBQLN2	MSMS	GG20161007_CRH_Patient100_A02_02	2	354.1908141970634	2	354.189771	706.36499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.02	1	103.08	102.58	103.58	0.062805								0	0	0	1.0178	1	43171	43171		2.5775	0	1		+		25939	11559	12751	12806	29772	29772					6.1972260937182E-05
PPAASPPP	8	Unmodified	_PPAASPPP_					0	0	0		ENST00000590083.5_1_19:1237758-1237851:-|nuORF	ENST00000590083.5_1_19:1237758-1237851:-|nuORF	ENST00000590083.5_1_19:1237758-1237851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	733.3905517458916	1	733.387916	732.38064	2.5168	0.0018458	1.5443	0.0011325	4.0611	0.0029783	733.3890856477266	104.75	0.11214	104.91	104.82	104.93	0.16055					10	5	3	0	0	0	0.89178	1	44451	44451		0.69038	0	1	29632000			25940	7481	12752	12807	29773	29773					0.0037448374314408284
PPAGGKEL	8	Unmodified	_PPAGGKEL_					0	0	0		ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	384.7152282595634	2	384.716153	767.417754	-0.25455	-9.7929E-05	-2.4808	-0.00095441	-2.7354	-0.0010523	384.71533333142565	66.676	0.6077	66.676	66.285	66.893	0					52	18	4	0	0	0	0.89176	1	27766	27766		0.79363	0	1	8725400			25941	5999	12753	12808	29774	29774					0.024741552888940532
PPAGGKEL	8	Unmodified	_PPAGGKEL_					0	0	0		ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	384.716153	767.417754	1.849	0.00071135	-3.6306	-0.0013968	-1.7816	-0.00068541	384.7148143705656	66.63	0.5343	66.954	66.685	67.22	0.32449	0.040848	-0.00032876	NaN	0.79363	40	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9486000			25942	5999	12753	12808							0.024741552888940532
PPAGGKEL	8	Unmodified	_PPAGGKEL_					0	0	0		ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	ENST00000357529.7_1_12:8850703-8852541:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	384.716153	767.417754	1.7128	0.00065896	-3.5836	-0.0013787	-1.8708	-0.00071972	384.7148506982818	65.711	0.49237	67.11	66.817	67.31	1.3989	0.19615	-0.00029259	NaN	0.79363	52	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12137000			25943	5999	12753	12808							0.024741552888940532
PPAGLKAT	8	Unmodified	_PPAGLKAT_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7256652712822	2	377.726521	753.438489	2.0909	0.0007898	-2.8178	-0.0010644	-0.7269	-0.00027457	377.7250264475004	63.126	0.91487	64.54	63.838	64.753	1.4134					54	29	3	0	0	0	0.89176	1	26482	26482		0.79363	0	1	3478500			25944	3425;7900	12754	12809	29775	29775					0.05190745668551244
PPAGLKAT	8	Unmodified	_PPAGLKAT_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7256347537041	2	377.726521	753.438489	2.459	0.00092884	-3.3504	-0.0012655	-0.89135	-0.00033668	377.7248672158315	62.644	0.88928	64.588	63.955	64.845	1.9444					47	28	3	0	0	0	0.89176	1	26317	26317		0.79363	0	1	3993900			25945	3425;7900	12754	12809	29776	29776					0.05190745668551244
PPALLPWQTL	10	Unmodified	_PPALLPWQTL_					0	0	0			REV__ENST00000325844.8_1_15:89021271-89021544:+|nuORF	REV__ENST00000325844.8_1_15:89021271-89021544:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2241393923759	3	379.221853	1134.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.733	1	91.137	90.637	91.637	1.4045								0	0	0	0.66161	1	37804	37804		1.7423	0.41263	1		+		25946	12430	12755	12810	29777	29777					0.08179479408136103
PPARGTLIGL	10	Unmodified	_PPARGTLIGL_					0	0	0			REV__ENST00000415602.5_3_20:62694892-62695267:+|nuORF	REV__ENST00000415602.5_3_20:62694892-62695267:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.2077209353447	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.15	1	110.32	109.82	110.82	0.16133								0	0	0	0.66254	1	47859	47859		0.15932	0	1		+		25947	12941	12756	12811	29778	29778					0.10006039576853709
PPARNAGRMP	10	Unmodified	_PPARNAGRMP_					0	0	0			REV__ENST00000417302.5_1_11:534311-535546:-|nuORF	REV__ENST00000417302.5_1_11:534311-535546:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1916381716728	2	533.782367	1065.55018	1.695	0.00090477	-3.2189	-0.0017182	-1.5239	-0.00081344	533.7802999010758	46.258	0.28284	48.229	48.064	48.347	1.9703					16	8	2	0	0	0	0.12554	1	19323	19323		0	0	1	903070	+		25948	12951	12757	12812	29779	29779					0.02002856754052118
PPAWLLLLL	9	Unmodified	_PPAWLLLLL_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6260253787041	2	518.333696	1034.65284	2.8122	0.0014577	2.5557	0.0013247	5.3679	0.0027824	518.3349662095652	91.608	0.3877	91.799	91.529	91.917	0.19041					28	11	3	0	0	0	0.11787	1	38277	38277		0	0	1	1936800	+		25949	8368	12758	12813	29780	29780					0.1368987276448479
PPCSGIRGWV	10	Unmodified	_PPCSGIRGWV_					0	0	0			REV__ENST00000548249.5_1_12:57924119-57924194:-|nuORF	REV__ENST00000548249.5_1_12:57924119-57924194:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	535.7877075076103	2	536.273844	1070.53313	1.9209	0.0010301	0.29871	0.00016019	2.2196	0.0011903	536.2737379093394	67.003	0.43321	68.391	68.153	68.586	1.3888					48	13	5	0	0	0	0.12484	1	28020	28020		3.9444	1.6417	1	14413000	+		25950	13814	12759	12814	29781	29781					0.0006893614825003169
PPDDDLRSQAP	11	Unmodified	_PPDDDLRSQAP_					0	0	0			REV__ENSG00000116898|ENST00000373116|MRPS15	REV__ENSG00000116898|ENST00000373116|MRPS15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	605.2880126833916	2	605.788566	1209.56258	0.24695	0.0001496	-3.134	-0.0018985	-2.887	-0.0017489	606.2867044681442	35.828	0.076134	37.104	37.074	37.15	1.2762					6	5	2	0	0	0	0.14606	1	15046	15046		3.5965	0.31518	1	1013000	+		25951	9485	12760	12815	29782	29782					-0.03381873092553178
PPDQCVYCTYK	11	Unmodified	_PPDQCVYCTYK_					0	0	0			REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	658.7823364138603	2	658.786124	1315.55769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.352	1	38.661	38.161	39.161	0.30857								0	0	0	0.63775	1	16136	16136		4.5289	0.93237	1		+		25952	8567	12761	12816	29783	29783					-0.08746216551207908
PPDQCVYCTYK	11	Unmodified	_PPDQCVYCTYK_					0	0	0			REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	REV__PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	658.7861205935478	2	658.786124	1315.55769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.125	1	32.406	31.906	32.906	1.2813								0	0	0	0.63773	1	13058	13058		8.9762	2.7705	1		+		25953	8567	12761	12816	29784	29784					-0.08746216551207908
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.8843566775322	3	304.537002	910.589176	-2.2303	-0.00067921	-4.2195	-0.001285	-6.4498	-0.0019642	304.53565996296805	42.834	0.83539	42.834	42.133	42.968	0					30	26	2	0	0	0	2.3239	1	17757	17757		0.45834	0	1	401050	+		25954	8935	12762	12817	29785	29785					0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.4013244509697	3	304.537002	910.589176	0.51675	0.00015737	-0.056088	-1.7081E-05	0.46066	0.00014029	304.5371261195921	31.598	1.2822	31.889	31.211	32.494	0.29086					74	41	2	0	0	0	2.3239	1	13337	13337		0.45834	0	1	1067700	+		25955	8935	12762	12817	29786	29786					0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5365478396416	3	304.537002	910.589176	-1.3833	-0.00042126	-0.025438	-7.7468E-06	-1.4087	-0.00042901	304.53684677664285	12.944	0.18872	13.67	13.569	13.757	0.72639					13	5	3	0	0	0	0.89176	1	5373	5373		0.45834	0	1	570890	+		25956	8935	12762	12817	29787	29787					0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5369140505791	3	304.537002	910.589176	-0.57676	-0.00017565	-0.76202	-0.00023206	-1.3388	-0.00040771	304.5366903319011	31.474	1.0767	32.756	32.311	33.388	1.2813					67	35	3	0	0	0	0.89176	1	13141	13141		0.45834	0	1	4194700	+		25957	8935	12762	12817	29788	29788					0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5367309451103	3	304.537002	910.589176	0.01419	4.3213E-06	-0.73077	-0.00022255	-0.71658	-0.00021822	304.5367895994837	26.953	0.89448	28.7	28.495	29.39	1.747					53	28	3	0	0	0	0.89176	1	11418	11418		0.45834	0	1	3495000	+		25958	8935	12762	12817	29789	29789					0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.537002	910.589176	-0.16837	-5.1273E-05	-0.72598	-0.00022109	-0.89435	-0.00027236	304.5368027719121	27.536	0.80119	28.815	28.595	29.396	1.2789	-0.053547	-1.7691E-05	NaN	0.45834	52	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3429700	+		25959	8935	12762	12817							0.1303051232736152
PPFILIVL	8	Unmodified	_PPFILIVL_					0	0	0			REV__nc|ENSG00000095981|Q96T55-5|KCNK16	REV__nc|ENSG00000095981|Q96T55-5|KCNK16	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	304.537002	910.589176	0.01419	4.3213E-06	-0.73077	-0.00022255	-0.71658	-0.00021822	304.5367895994837	26.953	0.89448	28.7	28.495	29.39	1.747	-0.16856	-2.2063E-05	NaN	0.45834	53	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3495000	+		25960	8935	12762	12817							0.1303051232736152
PPFILVGSNV	10	Unmodified	_PPFILVGSNV_					0	0	0		nc|ENSG00000154040|O75952-5|CABYR;ENSG00000154040|ENST00000399496|CABYR	nc|ENSG00000154040|O75952-5|CABYR	nc|ENSG00000154040|O75952-5|CABYR	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2023498415947	3	348.20257	1041.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.645	1	65.645	65.145	66.145	0								0	0	0	0.66218	1	27354	27354		0.77653	0	1				25961	3373	12763	12818	29790	29790					0.0667521748271156
PPFILVGSNV	10	Unmodified	_PPFILVGSNV_					0	0	0		nc|ENSG00000154040|O75952-5|CABYR;ENSG00000154040|ENST00000399496|CABYR	nc|ENSG00000154040|O75952-5|CABYR	nc|ENSG00000154040|O75952-5|CABYR	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2008849978447	3	348.20257	1041.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.851	1	65.851	65.351	66.351	0								0	0	0	0.66218	1	27437	27437		0.77653	0	1				25962	3373	12763	12818	29791	29791					0.0667521748271156
PPGCPGQGQD	10	Unmodified	_PPGCPGQGQD_					0	0	0		ENSG00000186648|ENST00000342740|CARMIL3;ENST00000560349.1_1_14:24531731-24532082:+|nuORF;ENST00000559694.5_1_14:24530705-24534560:+|nuORF	ENSG00000186648|ENST00000342740|CARMIL3	ENSG00000186648|ENST00000342740|CARMIL3	MSMS	GG20161007_CRH_Patient100_A02_01	1	319.1360961794853	3	319.13612	954.38653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.59	1	17.59	17.09	18.09	0								0	0	0	0.66218	1	7303	7303		0.77653	0.31819	1				25963	4800	12764	12819	29792	29792					-0.09248785807494642
PPGMCCYF	8	Unmodified	_PPGMCCYF_					0	0	0		ENSG00000196081|ENST00000418100|ZNF724	ENSG00000196081|ENST00000418100|ZNF724	ENSG00000196081|ENST00000418100|ZNF724	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1747009158134	2	459.171353	916.328152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.58	1	95.703	95.203	96.203	0.12331								0	0	0	1.0178	1	39997	39997		0.79363	0	1				25964	4909	12765	12820	29793	29793					-0.13335881977991448
PPGMCCYF	8	Unmodified	_PPGMCCYF_					0	0	0		ENSG00000196081|ENST00000418100|ZNF724	ENSG00000196081|ENST00000418100|ZNF724	ENSG00000196081|ENST00000418100|ZNF724	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1725036501884	2	459.171353	916.328152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.334	1	57.744	57.244	58.244	1.4099								0	0	0	1.0178	1	23609	23609		0.79363	0	1				25965	4909	12765	12820	29794	29794					-0.13335881977991448
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	353.1993896365166	2	353.200139	704.385725	-0.030733	-1.0855E-05	-1.9147	-0.00067628	-1.9455	-0.00068714	353.19945310775773	14.845	0.84081	14.957	14.291	15.131	0.11295					58	26	3	0	0	0	0.76629	1	6154	6154		24.21	0	1	3412500	+		25966	8368	12766	12821	29795	29795					0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	353.1996642947197	2	353.200139	704.385725	-0.004262	-1.5053E-06	-1.3675	-0.00048301	-1.3718	-0.00048452	353.19956749669274	15.195	0.68921	15.308	15.101	15.79	0.11295					45	21	3	0	0	0	0.67839	2	6352	6308;6352		32.454	0	1	2133500	+		25967	8368	12766	12821	29796;29797	29797					0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	353.1996642947197	2	353.200139	704.385725	-1.2082	-0.00042673	-0.94537	-0.00033391	-2.1535	-0.00076063	353.19979360475696	14.305	0.83685	15.074	14.453	15.29	0.76937					46	32	3	0	0	0	0.76629	1	5939	5939		24.21	0	1	3554600	+		25968	8368	12766	12821	29798	29798					0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	353.1998168826103	2	353.200139	704.385725	-0.25159	-8.8861E-05	-2.3711	-0.00083747	-2.6227	-0.00092633	353.1991807928485	14.189	0.99298	15.086	14.359	15.352	0.89664					73	42	2	0	0	0	0.76629	1	5879	5879		24.21	0	1	3134400	+		25969	8368	12766	12821	29799	29799					0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	353.200139	704.385725	-0.030733	-1.0855E-05	-1.9147	-0.00067628	-1.9455	-0.00068714	353.19945310775773	14.845	0.84081	14.957	14.291	15.131	0.11295	-0.081768	-0.00011175	NaN	24.21	58	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3412500	+		25970	8368	12766	12821							0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	353.200139	704.385725	-0.004262	-1.5053E-06	-1.3675	-0.00048301	-1.3718	-0.00048452	353.19956749669274	15.195	0.68921	15.308	15.101	15.79	0.11295	-0.098497	0.00023983	NaN	32.454	45	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2133500	+		25971	8368	12766	12821							0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	353.200139	704.385725	-1.2082	-0.00042673	-0.94537	-0.00033391	-2.1535	-0.00076063	353.19979360475696	14.305	0.83685	15.074	14.453	15.29	0.76937	0.035034	0.000573	NaN	24.21	46	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3554600	+		25972	8368	12766	12821							0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	353.200139	704.385725	-0.25159	-8.8861E-05	-2.3711	-0.00083747	-2.6227	-0.00092633	353.1991807928485	14.189	0.99298	15.086	14.359	15.352	0.89664	0.046734	-0.00043412	NaN	24.21	73	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3134400	+		25973	8368	12766	12821							0.02170787605757596
PPGPLGAP	8	Unmodified	_PPGPLGAP_					0	0	0			REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	REV__COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	353.200139	704.385725	-0.23355	-8.249E-05	-2.5884	-0.00091424	-2.822	-0.00099673	353.19914647270156	14.609	0.52413	15.505	15.312	15.837	0.89664	0.098497	-0.00062262	NaN	32.454	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1368100	+		25974	8368	12766	12821							0.02170787605757596
PPGPPGKK	8	Unmodified	_PPGPPGKK_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2370483279228	2	389.234513	776.454474	2.7278	0.0010618	3.9188	0.0015253	6.6467	0.0025871	389.23596351653873	97.74	0.15968	97.831	97.715	97.874	0.090881					9	5	2	0	0	0	0.89178	1	40890	40890		0.69038	0	1	2838400	+		25975	8813	12767	12822	29800	29800					0.057304519054810044
PPGPPGKK	8	Unmodified	_PPGPPGKK_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	389.234513	776.454474	-0.43389	-0.00016888	8.7341	0.0033996	8.3002	0.0032307	389.2380342248615	97.801	0.15583	97.801	97.721	97.877	0	-0.015062	0.003226	NaN	0.69038	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2744100	+		25976	8813	12767	12822							0.057304519054810044
PPGPPGKK	8	Unmodified	_PPGPPGKK_					0	0	0			REV__ENSG00000081052|ENST00000396625|COL4A4	REV__ENSG00000081052|ENST00000396625|COL4A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	389.234513	776.454474	2.7278	0.0010618	3.9188	0.0015253	6.6467	0.0025871	389.23596351653873	97.74	0.15968	97.831	97.715	97.874	0.090881	0.015062	-0.00052256	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2838400	+		25977	8813	12767	12822							0.057304519054810044
PPGSSSLL	8	Unmodified	_PPGSSSLL_					0	0	0		nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP;SRCAP|p.P1130R|1|0.06|ENSG00000080603|chr16:30721324-30721324|C/G|missense_variant;SRCAP|p.L2600Afs*30|1|0.06|ENSG00000080603|chr16:30737837-30737838|-/G|frameshift_variant	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.2092468142509	2	379.208161	756.401769	1.2878	0.00048834	1.3425	0.00050907	2.6303	0.00099742	379.20857232077435	34.787	0.37213	35.086	34.867	35.239	0.29942					47	20	3	0	0	0	0.89176	1	14575	14575		0.79363	0	1	24298000			25978	1005	12768	12823	29801	29801					0.013824490520164545
PPGSSSLL	8	Unmodified	_PPGSSSLL_					0	0	0		nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP;SRCAP|p.P1130R|1|0.06|ENSG00000080603|chr16:30721324-30721324|C/G|missense_variant;SRCAP|p.L2600Afs*30|1|0.06|ENSG00000080603|chr16:30737837-30737838|-/G|frameshift_variant	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.2088195681572	2	379.208161	756.401769	-0.32679	-0.00012392	2.6865	0.0010187	2.3597	0.00089481	379.20904457142314	33.549	0.20961	34.824	34.714	34.923	1.2746					35	19	2	0	0	0	0.89176	1	14085	14085		0.79363	0	1	23017000			25979	1005	12768	12823	29802	29802					0.013824490520164545
PPHCGAAA	8	Unmodified	_PPHCGAAA_					0	0	0			REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.1664611697197	2	362.165773	722.316994	1.9895	0.00072054	-0.20799	-7.5327E-05	1.7815	0.00064521	362.16567232819756	101.86	0.18128	102.03	101.93	102.11	0.17032					9	5	2	0	0	0	0.89198	1	42870	42870		0	0	1	14231000	+		25980	13458	12769	12824	29803	29803					-0.05527199965615637
PPHCGAAA	8	Unmodified	_PPHCGAAA_					0	0	0			REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.1655761599541	2	362.165773	722.316994	2.873	0.0010405	-1.6441	-0.00059544	1.2288	0.00044505	362.16507681800243	101.79	0.17984	101.98	101.87	102.05	0.19076					9	5	2	0	0	0	0.89198	1	42802	42802		0	0	1	5906100	+		25981	13458	12769	12824	29804	29804					-0.05527199965615637
PPHCGAAA	8	Unmodified	_PPHCGAAA_					0	0	0			REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	362.165773	722.316994	1.9895	0.00072054	-0.20799	-7.5327E-05	1.7815	0.00064521	362.16567232819756	101.86	0.18128	102.03	101.93	102.11	0.17032	0.02684	0.00028754	NaN	0	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14231000	+		25982	13458	12769	12824							-0.05527199965615637
PPHCGAAA	8	Unmodified	_PPHCGAAA_					0	0	0			REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	REV__ENST00000495219.1_1_22:45182465-45204194:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	362.165773	722.316994	2.873	0.0010405	-1.6441	-0.00059544	1.2288	0.00044505	362.16507681800243	101.79	0.17984	101.98	101.87	102.05	0.19076	-0.02684	-0.00075269	NaN	0	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5906100	+		25983	13458	12769	12824							-0.05527199965615637
PPHLLLPG	8	Unmodified	_PPHLLLPG_					0	0	0		ENST00000263468.12_1_11:101785776-101785899:+|nuORF	ENST00000263468.12_1_11:101785776-101785899:+|nuORF	ENST00000263468.12_1_11:101785776-101785899:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2537109255791	2	422.257988	842.501424	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.206	1	92.206	91.706	92.706	0								0	0	0	1.0178	1	38530	38530		2.8892	0	1				25984	5644	12770	12825	29805	29805					0.07387311456614043
PPHLNRVP	8	Unmodified	_PPHLNRVP_					0	0	0			REV__nc|ENSG00000114948|O75077-3|ADAM23	REV__nc|ENSG00000114948|O75077-3|ADAM23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2722350955009	2	465.269419	928.524284	4.3925	0.0020437	0.70164	0.00032645	5.0942	0.0023702	465.27000238683627	93.581	0.41489	94.453	94.226	94.641	0.87177					23	12	3	0	0	0	0.89008	1	39422	39422		2.5775	0	1	1401000	+		25985	9423	12771	12826	29806	29806					0.05716330574091444
PPHLVHKL	8	Unmodified	_PPHLVHKL_					0	0	0		nc|ENSG00000188004|P0DPA3|SNHG28	nc|ENSG00000188004|P0DPA3|SNHG28	nc|ENSG00000188004|P0DPA3|SNHG28	MSMS	GG20161007_CRH_Patient100_W632_02	4	314.1964599490166	3	314.19575	939.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.007	1	24.658	24.158	25.158	1.6511								0	0	0	1.0178	1	9605	9605		0.45834	0	1				25986	7956	12772	12827	29807	29807					0.09322091613557859
PPHLWKST	8	Unmodified	_PPHLWKST_					0	0	0		ENSG00000106031|ENST00000649031|HOXA13	ENSG00000106031|ENST00000649031|HOXA13	ENSG00000106031|ENST00000649031|HOXA13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2663757205009	2	483.263802	964.513051	3.2411	0.0015663	1.7153	0.00082896	4.9564	0.0023953	483.26413351689763	58.45	0.2518	58.773	58.651	58.903	0.32299					11	7	2	0	0	0	0.88958	1	24502	24502		2.8892	0.58649	1	707320			25987	1554	12773	12828	29808	29808					0.029375084799426077
PPIHGIIHV	9	Unmodified	_PPIHGIIHV_					0	0	0			REV__ENST00000531336.1_1_11:6414536-6415276:+|nuORF	REV__ENST00000531336.1_1_11:6414536-6415276:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1993591189384	3	328.199272	981.575986	-0.63489	-0.00020837	1.2428	0.00040788	0.60791	0.00019951	328.19963786516615	32.144	0.68638	33.426	33.141	33.827	1.2813					82	23	5	0	0	0	0.75267	1	13421	13421		2.9952	0	1	112710000	+		25988	10818	12774	12829	29809	29809					0.08446074268010761
PPIHLKFLLKL	11	Unmodified	_PPIHLKFLLKL_					0	0	0			REV__ENSG00000133138|ENST00000357242|TBC1D8B	REV__ENSG00000133138|ENST00000357242|TBC1D8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.4714843630791	4	330.470692	1317.85366	0.56057	0.00018525	1.8194	0.00060127	2.38	0.00078653	330.4713022817203	48.369	1.0916	49.757	48.895	49.987	1.388					66	34	3	0	0	0	1.0402	1	20124	20124		0.094841	0.011491	1	1542500	+		25989	9872	12775	12830	29810	29810					0.20745142081113954
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1867248415947	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.536	1	77.536	77.036	78.036	0								0	0	0	1.0178	1	32278	32278		0.45834	0	1		+		25990	12669	12776	12831	29811	29811					0.03914357931569157
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1869384646416	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.654	1	77.654	77.154	78.154	0								0	0	0	1.0178	1	32327	32327		0.45834	0	1		+		25991	12669	12776	12831	29812	29812					0.03914357931569157
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1873657107353	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.777	1	77.777	77.277	78.277	0								0	0	0	1.0178	1	32379	32379		0.45834	0	1		+		25992	12669	12776	12831	29813	29813					0.03914357931569157
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1864807009697	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.274	1	41.591	41.091	42.091	0.31683								0	0	0	1.0178	1	17340	17340		0.45834	0	1		+		25993	12669	12776	12831	29814	29814					0.03914357931569157
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1879455447197	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.337	1	77.63	77.13	78.13	1.2938								0	0	0	1.0178	1	32047	32047		0.45834	0	1		+		25994	12669	12776	12831	29815	29815					0.03914357931569157
PPILFREE	8	Unmodified	_PPILFREE_					0	0	0			REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	REV__ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1867858767509	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.664	1	77.958	77.458	78.458	1.2938								0	0	0	1.0178	1	32183	32183		0.45834	0	1		+		25995	12669	12776	12831	29816	29816					0.03914357931569157
PPILSVVSV	9	Unmodified	_PPILSVVSV_					0	0	0		ENST00000374135.8_1_1:27205919-27206000:-|nuORF	ENST00000374135.8_1_1:27205919-27206000:-|nuORF	ENST00000374135.8_1_1:27205919-27206000:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2480346560478	3	304.191783	909.553519	-0.26944	-8.1962E-05	1.066	0.00032428	0.79659	0.00024232	304.1920348570974	19.951	0.42296	21.474	21.286	21.709	1.5237					19	13	2	0	0	0	0.11941	1	8290	8290		1.0715	1.0715	1	194090			25996	6169	12777	12832	29817	29817					0.0951243007971243
PPKALALV	8	Unmodified	_PPKALALV_					0	0	0			REV__nc|ENSG00000068308|Q96G74-4|OTUD5	REV__nc|ENSG00000068308|Q96G74-4|OTUD5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	404.2660705447197	2	404.768189	807.521825	-0.17344	-7.0201E-05	-0.41687	-0.00016874	-0.59031	-0.00023894	404.76832281480705	100.89	0.24551	100.89	100.75	101	0					10	7	2	0	0	0	2.3239	1	42221	42221		0	0	1	1439600	+		25997	8701	12778	12833	29818	29818					0.11036482116401203
PPKALALV	8	Unmodified	_PPKALALV_					0	0	0			REV__nc|ENSG00000068308|Q96G74-4|OTUD5	REV__nc|ENSG00000068308|Q96G74-4|OTUD5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	404.768189	807.521825	2.8219	0.0011422	3.3826	0.0013692	6.2044	0.0025113	404.7701042013241	100.82	0.18954	101	100.91	101.1	0.18048	0.054023	0.0023371	NaN	0	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297030	+		25998	8701	12778	12833							0.11036482116401203
PPKAVKAL	8	Unmodified	_PPKAVKAL_					0	0	0			REV__AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|2|1|sense	REV__AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|2|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2754089236259	2	412.273638	822.532724	2.9548	0.0012182	1.6576	0.00068338	4.6123	0.0019015	412.27448321916677	106.22	0.31258	106.28	106.04	106.35	0.05455					27	14	4	0	0	0	0.89178	1	45191	45191		0.69038	0	1	82214000	+		25999	8111	12779	12834	29819	29819					0.1143588449069739
PPKAVKAL	8	Unmodified	_PPKAVKAL_					0	0	0			REV__AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|2|1|sense	REV__AluSq2_dup58973|chr20:63864482-63864792:+|1.2620965573636216|0.4923412823427783|1.36|429.0|2|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2770568728447	2	412.273638	822.532724	2.9212	0.0012044	0.2507	0.00010336	3.1719	0.0013077	412.27371234347015	106.18	0.19926	106.34	106.23	106.43	0.15781					33	10	5	0	0	0	0.89178	1	45467	45467		0.69038	0	1	345950000	+		26000	8111	12779	12834	29820	29820					0.1143588449069739
PPKKGGGA	8	Unmodified	_PPKKGGGA_					0	0	0			REV__ENSG00000167074|ENST00000266304|TEF	REV__ENSG00000167074|ENST00000266304|TEF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.2116271853447	2	356.211038	710.407523	-1.5577	-0.00055488	2.5728	0.00091644	1.015	0.00036156	356.21164389978384	100.34	0.27847	100.34	100.2	100.47	0					15	8	3	0	0	0	0.89198	1	42013	42013		0	0	1	2132600	+		26001	10853	12780	12835	29821	29821					0.04073592354336597
PPKKGGGA	8	Unmodified	_PPKKGGGA_					0	0	0			REV__ENSG00000167074|ENST00000266304|TEF	REV__ENSG00000167074|ENST00000266304|TEF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	356.2126953005791	2	356.211038	710.407523	2.4511	0.00087312	1.0376	0.0003696	3.4887	0.0012427	356.2110924106396	100.29	0.28195	100.36	100.22	100.5	0.072716					12	8	2	0	0	0	0.89198	1	41993	41993		0	0	1	3553100	+		26002	10853	12780	12835	29822	29822					0.04073592354336597
PPKKGGGA	8	Unmodified	_PPKKGGGA_					0	0	0			REV__ENSG00000167074|ENST00000266304|TEF	REV__ENSG00000167074|ENST00000266304|TEF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	356.211038	710.407523	-1.5577	-0.00055488	2.5728	0.00091644	1.015	0.00036156	356.21164389978384	100.34	0.27847	100.34	100.2	100.47	0	0.0092319	0.00071484	NaN	0	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2132600	+		26003	10853	12780	12835							0.04073592354336597
PPKKGGGA	8	Unmodified	_PPKKGGGA_					0	0	0			REV__ENSG00000167074|ENST00000266304|TEF	REV__ENSG00000167074|ENST00000266304|TEF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	356.211038	710.407523	2.4511	0.00087312	1.0376	0.0003696	3.4887	0.0012427	356.2110924106396	100.29	0.28195	100.36	100.22	100.5	0.072716	0.034174	-0.00037884	NaN	0	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3553100	+		26004	10853	12780	12835							0.04073592354336597
PPKKGGGA	8	Unmodified	_PPKKGGGA_					0	0	0			REV__ENSG00000167074|ENST00000266304|TEF	REV__ENSG00000167074|ENST00000266304|TEF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	356.211038	710.407523	2.8402	0.0010117	1.0191	0.00036303	3.8593	0.0013747	356.21111007162654	100.08	0.14687	100.29	100.24	100.39	0.20526	-0.043406	-0.000392	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	997260	+		26005	10853	12780	12835							0.04073592354336597
PPKKPVVRKKK	11	Unmodified	_PPKKPVVRKKK_					0	0	0			REV__ENST00000549307.5_1_12:58109828-58113249:+|nuORF	REV__ENST00000549307.5_1_12:58109828-58113249:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	327.0080444216728	4	326.977679	1303.88161	-0.053677	-1.7551E-05	-1.7748	-0.00058032	-1.8285	-0.00059787	327.2278458170812	23.135	0.52577	24.786	24.375	24.9	1.6511					25	16	2	0	0	0	0.14606	1	9687	9687		0.094841	0.094841	1	272510	+		26006	9944	12781	12836	29823	29823					0.24182465061176117
PPKLVLHPPPV	11	Unmodified	_PPKLVLHPPPV_					0	0	0		nc|ENSG00000110042|Q9Y2E6-2|DTX4;ENSG00000110042|ENST00000227451|DTX4	nc|ENSG00000110042|Q9Y2E6-2|DTX4	nc|ENSG00000110042|Q9Y2E6-2|DTX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.5848876833916	3	398.585015	1192.73321	0.69319	0.0002763	1.1865	0.00047294	1.8797	0.00074924	398.58536402258113	32.247	0.54592	34.071	33.789	34.335	1.8246					31	18	2	0	0	0	1.0362	1	13459	13459		1.3296	0.1363	1	4117400			26007	1689	12782	12837	29824	29824					0.14455734087505334
PPKPPSSP	8	Unmodified	_PPKPPSSP_					0	0	0			REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|136|3|sense	REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|136|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	806.4458495974541	1	806.44068	805.433404	2.9188	0.0023538	2.3709	0.001912	5.2897	0.0042658	806.4422282608235	104.55	0.11585	104.73	104.67	104.79	0.1731					18	5	4	0	0	0	0.89178	1	44255	44255		0.69038	0	1	126400000	+		26008	14204	12783	12838	29825	29825					0.022904418059511045
PPKVCPFR	8	Unmodified	_PPKVCPFR_					0	0	0		ENST00000541990.5_1_1:155170782-155174851:-|nuORF	ENST00000541990.5_1_1:155170782-155174851:-|nuORF	ENST00000541990.5_1_1:155170782-155174851:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1782714724541	3	315.177591	942.510943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.72	1	114.87	114.37	115.37	0.14976								0	0	0	1.0178	1	49628	49628		0.45834	0	1				26009	7219	12784	12839	29826	29826					0.037387564704886245
PPKVCPFR	8	Unmodified	_PPKVCPFR_					0	0	0		ENST00000541990.5_1_1:155170782-155174851:-|nuORF	ENST00000541990.5_1_1:155170782-155174851:-|nuORF	ENST00000541990.5_1_1:155170782-155174851:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1781188845634	3	315.177591	942.510943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.27	1	115.42	114.92	115.92	0.14976								0	0	0	1.0178	1	49849	49849		0.45834	0	1				26010	7219	12784	12839	29827	29827					0.037387564704886245
PPLEEADLYDL	11	Unmodified	_PPLEEADLYDL_					0	0	0			REV__ENSG00000223611|ENST00000486479|SUPT20HL2	REV__ENSG00000223611|ENST00000486479|SUPT20HL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	637.8123046755791	2	637.811176	1273.6078	2.0483	0.0013064	0.45054	0.00028736	2.4988	0.0015938	637.8113471631638	79.264	1.3207	79.264	78.597	79.918	0					101	42	4	0	0	0	1.0366	1	32941	32941		1.1933	0.66858	1	1102000	+		26011	11885	12785	12840	29828	29828					-0.018060673500258417
PPLEKIVCK	9	Unmodified	_PPLEKIVCK_					0	0	0			REV__ENSG00000197608|ENST00000594440|ZNF841;REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	REV__ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.8052856326103	2	513.804445	1025.59434	2.204	0.0011324	-0.11482	-5.8996E-05	2.0892	0.0010734	513.804450563063	81.37	0.48544	81.661	81.4	81.885	0.29056					43	15	4	0	0	0	0.77526	1	33995	33995		4.3292	0.38484	1	17184000	+		26012	11683;11793	12786	12841	29829	29829					0.08256448127667682
PPLGAGCG	8	Unmodified	_PPLGAGCG_					0	0	0			REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1653930544853	2	336.162699	670.310846	2.4866	0.00083589	1.45	0.00048744	3.9366	0.0013233	336.164624839109	97.24	0.21104	97.524	97.39	97.601	0.28442					14	6	3	0	0	0	0.89198	1	40909	40909		0	0	1	9635500	+		26013	13675	12787	12842	29830	29830					-0.03749718197116181
PPLGAGCG	8	Unmodified	_PPLGAGCG_					0	0	0			REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	336.162699	670.310846	2.4866	0.00083589	1.45	0.00048744	3.9366	0.0013233	336.164624839109	97.24	0.21104	97.524	97.39	97.601	0.28442	0.031143	0.00016295	NaN	0	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9635500	+		26014	13675	12787	12842							-0.03749718197116181
PPLGAGCG	8	Unmodified	_PPLGAGCG_					0	0	0			REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	REV__ENST00000527295.5_1_11:407027-408122:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	336.162699	670.310846	2.7352	0.00091947	1.003	0.00033716	3.7382	0.0012566	336.1641205898123	97.156	0.15785	97.462	97.35	97.508	0.3062	-0.031143	-0.00013759	NaN	0	19	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10373000	+		26015	13675	12787	12842							-0.03749718197116181
PPLHPLLRIA	10	Unmodified	_PPLHPLLRIA_					0	0	0		ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|5|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|3|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|4|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|8|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|15|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|13|intron;ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|12|intron;nc|ENSG00000112200|Q9Y4E5-4|ZNF451	ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|5|intron	ENSG00000112200.17,ZNF451,chr6,+,I7.1,57099611,57100602|86|6.45|5|intron	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2402221560478	3	376.241359	1125.70225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.733	1	39.017	38.517	39.517	1.284								0	0	0	0.66155	1	15840	15840		0.77653	0	1				26016	1771	12788	12843	29831	29831					0.14442580773265945
PPLIRVVQN	9	Unmodified	_PPLIRVVQN_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6254150271416	2	518.319109	1034.62366	1.7736	0.00091927	0.11113	5.7601E-05	1.8847	0.00097687	518.3206112032308	68.001	0.7554	68.324	68.121	68.877	0.32269					54	23	3	0	0	0	0.11812	1	28629	28629		4.756	1.8668	1	1016800	+		26017	9080	12789	12844	29832	29832					0.10773728468188892
PPLKLKTA	8	Unmodified	_PPLKLKTA_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2	REV__ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	867.5690185427666	1	867.566215	866.558939	1.1845	0.0010276	2.3599	0.0020474	3.5444	0.003075	867.5686199284987	106.22	0.13104	106.22	106.15	106.28	0					15	6	3	0	0	0	0.89178	1	45285	45285		0.69038	0	1	20186000	+		26018	10447	12790	12845	29833	29833					0.12032153662187284
PPLKLKTA	8	Unmodified	_PPLKLKTA_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2	REV__ENSG00000153201|ENST00000283195|RANBP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	867.566215	866.558939	1.1845	0.0010276	2.3599	0.0020474	3.5444	0.003075	867.5686199284987	106.22	0.13104	106.22	106.15	106.28	0	-0.008755	0.0004922	NaN	0.69038	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20186000	+		26019	10447	12790	12845							0.12032153662187284
PPLKLKTA	8	Unmodified	_PPLKLKTA_					0	0	0			REV__ENSG00000153201|ENST00000283195|RANBP2	REV__ENSG00000153201|ENST00000283195|RANBP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	867.566215	866.558939	2.7944	0.0024243	1.2142	0.0010534	4.0086	0.0034777	867.5674426772746	106.18	0.11955	106.24	106.17	106.29	0.05455	0.008755	-0.00050182	NaN	0.69038	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12658000	+		26020	10447	12790	12845							0.12032153662187284
PPLLFPCP	8	Unmodified	_PPLLFPCP_					0	0	0			REV__ENST00000468950.5_1_2:238678415-238682646:+|nuORF	REV__ENST00000468950.5_1_2:238678415-238682646:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.2420837283134	2	442.24095	882.467346	2.83	0.0012516	0.32205	0.00014242	3.1521	0.001394	442.2409968616687	75.445	0.58263	76.752	76.404	76.987	1.3063					43	18	3	0	0	0	0.89176	1	31698	31698		0.79363	0	1	11008000	+		26021	13264	12791	12846	29834	29834					0.021411469733379818
PPLLLLLRGS	10	Unmodified	_PPLLLLLRGS_					0	0	0		ENSG00000169418|ENST00000368680|NPR1;NPR1|p.G297Efs*19|1|0.29|ENSG00000169418|chr1:153680668-153680669|-/A|frameshift_variant;NPR1|p.S542Cfs*2|1|0.34|ENSG00000169418|chr1:153685823-153685826|CTCC/-|frameshift_variant;NPR1|p.Q760Hfs*40|1|0.11|ENSG00000169418|chr1:153688084-153688084|G/-|frameshift_variant	ENSG00000169418|ENST00000368680|NPR1	ENSG00000169418|ENST00000368680|NPR1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.3292724490166	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3597	1	2.3597	1.8597	2.8597	0								0	0	0	0.66255	1	968	968		0.13989	0	1				26022	4090	12792	12847	29835	29835					0.15527758679149883
PPLLLLVF	8	Unmodified	_PPLLLLVF_					0	0	0		ENSG00000141279|ENST00000322157|NPEPPS;nc|ENSG00000274487|A6NEC2-3|NPEPPSL1;NPEPPS-NDUFAF2|1|fusion;nc|ENSG00000274487|A6NEC2|NPEPPSL1;NPEPPS-MLLT10|1|fusion;NPEPPS-MLLT10|2|fusion	ENSG00000141279|ENST00000322157|NPEPPS	ENSG00000141279|ENST00000322157|NPEPPS	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	305.1570007205009	3	304.537002	910.589176	-3.2617	-0.0009933	0.51399	0.00015653	-2.7477	-0.00083677	304.5371025920972	18.271	1.1714	18.271	17.78	18.951	0					108	40	4	0	0	0	2.3239	1	7445	7445		0.45834	0	1	6086400			26023	2951	12793	12848	29836	29836					0.13030512327384258
PPLLLNVRP	9	Unmodified	_PPLLLNVRP_					0	0	0		NSUN2|p.K565Gfs*9|1|0.04|ENSG00000037474|chr5:6605316-6605317|TT/-|frameshift_variant;NSUN2|p.A684Rfs*11|1|0.06|ENSG00000037474|chr5:6600180-6600181|-/G|frameshift_variant;nc|ENSG00000037474|Q08J23-2|NSUN2;ENSG00000037474|ENST00000264670|NSUN2	NSUN2|p.K565Gfs*9|1|0.04|ENSG00000037474|chr5:6605316-6605317|TT/-|frameshift_variant	NSUN2|p.K565Gfs*9|1|0.04|ENSG00000037474|chr5:6605316-6605317|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8232910037041	2	509.824027	1017.6335	2.3439	0.001195	-3.2377	-0.0016507	-0.89383	-0.00045569	509.8221744854012	91.646	0.47856	91.646	91.436	91.915	0					35	14	3	0	0	0	0.85019	1	38315	38315		0.52476	0.12405	1	2556300			26024	651	12794	12849	29837	29837					0.12538916473556583
PPLLLPAALY	10	Unmodified	_PPLLLPAALY_					0	0	0			REV__ENSG00000120055|ENST00000625129|C10orf95	REV__ENSG00000120055|ENST00000625129|C10orf95	MSMS	GG20161007_CRH_Patient100_A02_02	2	534.3211547732353	2	534.328611	1066.64267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.54	103.04	104.04	0.059502								0	0	0	0.66237	1	43412	43412		0.45834	0	1		+		26025	9564	12795	12850	29838	29838					0.1120126503924439
PPLLPTDPC	9	Unmodified	_PPLLPTDPC_					0	0	0			REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.7451049685478	2	476.744053	951.473554	1.986	0.00094683	-0.15817	-7.5405E-05	1.8279	0.00087142	476.7440646806542	42.151	2.2296	43.491	42.857	45.087	1.3399					205	71	4	0	0	0	0.20838	6	17714	17590;17637;17675;17714;17752;17833		32.117	7.4431	1	12018000	+		26026	14431	12796	12851	29839;29840;29841;29842;29843;29844	29842					-0.0041237958580495615
PPLLPTDPC	9	Unmodified	_PPLLPTDPC_					0	0	0			REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	476.7454101443291	2	476.744053	951.473554	1.8566	0.00088511	-0.4557	-0.00021725	1.4009	0.00066786	476.7439476000764	41.733	2.333	43.626	42.928	45.261	1.8927					183	75	4	0	0	0	0.20838	4	17503	17466;17503;17543;17623		32.117	7.7316	1	12551000	+		26027	14431	12796	12851	29845;29846;29847;29848	29846					-0.0041237958580495615
PPLLSGTIL	9	Unmodified	_PPLLSGTIL_					0	0	0		ENST00000495001.1_1_10:103607287-103649300:-|nuORF	ENST00000495001.1_1_10:103607287-103649300:-|nuORF	ENST00000495001.1_1_10:103607287-103649300:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7864257693291	2	455.784036	909.553519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.24	1	100.24	99.741	100.74	0								0	0	0	0.42693	1	41962	41962		0.52476	0	1				26028	6941	12797	12852	29849	29849					0.09512430079723799
PPLMLLHG	8	Unmodified	_PPLMLLHG_					0	0	0		tr|A0A553SJM9|A0A553SJM9_NIACIPutative2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menHPE=3SV=1	tr|A0A553SJM9|A0A553SJM9_NIACIPutative2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menHPE=3SV=1	tr|A0A553SJM9|A0A553SJM9_NIACIPutative2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.2528259158134	2	439.251849	876.489145	1.3543	0.00059488	0.014444	6.3447E-06	1.3687	0.00060122	439.25151564437147	73.476	0.51829	73.476	73.216	73.734	0					41	16	3	0	0	0	0.89176	1	30666	30666		0.79363	0	1	15482000			26029	16252	12798	12853	29850	29850					0.04595951721933034
PPLPKKTA	8	Unmodified	_PPLPKKTA_					0	0	0			REV__nc|ENSG00000115266|O95996-2|APC2	REV__nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	851.5372192263603	1	851.534915	850.527639	3.0664	0.0026112	1.8984	0.0016166	4.9648	0.0042277	851.5363132483378	109.32	0.23715	109.48	109.34	109.58	0.1548					20	10	2	0	0	0	0.89178	1	47353	47353		0.69038	0	1	34657000	+		26030	9432	12799	12854	29851	29851					0.09639580628095246
PPLRLKMRKFT	11	Unmodified	_PPLRLKMRKFT_					0	0	0		ENST00000267294.4_1_13:100617617-100617761:-|nuORF	ENST00000267294.4_1_13:100617617-100617761:-|nuORF	ENST00000267294.4_1_13:100617617-100617761:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1452209353447	3	462.951592	1385.83295	2.2407	0.0010374	0.19615	9.0809E-05	2.4369	0.0011282	462.95155495258297	92.781	0.48499	92.781	92.559	93.044	0					28	15	3	0	0	0	0.14606	1	38838	38838		0.094841	0	1	1428300			26031	5661	12800	12855	29852	29852					0.15546228429798248
PPLVPLTLAL	10	Unmodified	_PPLVPLTLAL_					0	0	0		ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2274963259697	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.64	1	104.64	104.14	105.14	0								0	0	0	0.66254	1	44211	44211		0.15932	0	1				26032	2536	12801	12856	29853	29853					0.1432955155628406
PPLVPLTLAL	10	Unmodified	_PPLVPLTLAL_					0	0	0		ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2278320193291	3	345.226716	1032.65832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.61	1	104.66	104.16	105.16	0.056801								0	0	0	0.66254	1	44152	44152		0.15932	0	1				26033	2536	12801	12856	29854	29854					0.1432955155628406
PPMTRTPWRRP	11	Unmodified	_PPMTRTPWRRP_					0	0	0			REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	698.3782836794853	2	697.87733	1393.74011	2.3997	0.0016747	-2.43	-0.0016959	-0.030344	-2.1176E-05	698.3774657992651	59.018	0.49437	59.344	58.994	59.489	0.32554					56	23	3	0	0	0	0.62604	1	24764	24764		20.415	0	1	6903700	+		26034	13771	12802	12857	29855	29855					0.058987236964185286
PPMTRTPWRRP	11	Unmodified	_PPMTRTPWRRP_					0	0	0			REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	697.8779174685478	2	697.87733	1393.74011	0.085393	5.9594E-05	-0.031893	-2.2258E-05	0.0535	3.7336E-05	697.8772948216832	57.782	0.22561	59.2	59.113	59.339	1.4181					25	15	2	0	0	0	0.6971	1	24245	24245		18.373	0	1	8668000	+		26035	13771	12802	12857	29856	29856					0.058987236964185286
PPMTRTPWRRP	11	Unmodified	_PPMTRTPWRRP_					0	0	0			REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	697.87733	1393.74011	0.085393	5.9594E-05	-0.031893	-2.2258E-05	0.0535	3.7336E-05	697.8772948216832	57.782	0.22561	59.2	59.113	59.339	1.4181	-0.15428	0.0012701	NaN	20.415	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8668000	+		26036	13771	12802	12857							0.058987236964185286
PPMTRTPWRRP	11	Unmodified	_PPMTRTPWRRP_					0	0	0			REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	REV__ENST00000538966.5_1_X:153029661-153030983:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	697.87733	1393.74011	-0.16884	-0.00011783	0.0057515	4.0138E-06	-0.16308	-0.00011381	697.8770713120058	57.247	0.20111	59.216	59.126	59.327	1.9684	-0.13827	0.0013227	NaN	20.415	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5362800	+		26037	13771	12802	12857							0.058987236964185286
PPMVTNTA	8	Unmodified	_PPMVTNTA_					0	0	0		ENSG00000132436|ENST00000433017|FIGNL1;nc|ENSG00000132436|Q6PIW4-2|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	ENSG00000132436|ENST00000433017|FIGNL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.7054626345634	2	415.707471	829.400389	-0.48903	-0.00020329	-2.3421	-0.00097365	-2.8312	-0.0011769	415.7063326286821	14.991	0.40536	14.991	14.75	15.155	0					15	12	2	0	0	0	0.89008	1	6243	6243		2.5775	0.27475	1	539380			26038	2531	12803	12858	29857	29857					-0.02113508308400469
PPNILYMS	8	Unmodified	_PPNILYMS_					0	0	0			REV__tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	REV__tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7399780154228	2	467.738771	933.462989	2.2259	0.0010412	-0.046803	-2.1892E-05	2.1791	0.0010193	467.73850724287405	50.288	3.6213	51.679	49.212	52.834	1.3911					248	116	3	0	0	0	0.87803	1	21062	21062		10.183	0.83596	1	3576900	+		26039	15186	12804	12859	29858	29858					-0.006403622402103792
PPNILYMS	8	Unmodified	_PPNILYMS_					0	0	0			REV__tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	REV__tr|A0A553SS13|A0A553SS13_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02285PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7384216189384	2	467.738771	933.462989	2.0444	0.00095626	0.29481	0.00013789	2.3392	0.0010942	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.87803	2	20294	20294;20718		10.183	10.183	1	3535400	+		26040	15186	12804	12859	29859;29860	29859					-0.006403622402103792
PPPAGKAA	8	Unmodified	_PPPAGKAA_					0	0	0			REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699645876884	2	354.705589	707.396624	-0.78632	-0.00027891	-0.27343	-9.6986E-05	-1.0597	-0.0003759	354.70505224255766	49.078	0.28311	49.078	48.906	49.189	0					12	8	2	0	0	0	2.3239	1	20509	20509		0.79363	0	1	671450	+		26041	8461	12805	12860	29861	29861					0.03122189980024359
PPPAGKAA	8	Unmodified	_PPPAGKAA_					0	0	0			REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	354.705589	707.396624	1.4201	0.0005037	-1.1181	-0.00039661	0.30191	0.00010709	354.70495911098607	48.858	0.31181	49.188	49.039	49.351	0.33034	-0.024448	-0.0003413	NaN	0.79363	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326780	+		26042	8461	12805	12860							0.03122189980024359
PPPAGKAA	8	Unmodified	_PPPAGKAA_					0	0	0			REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	REV__nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	354.705589	707.396624	2.237	0.00079348	-0.58644	-0.00020802	1.6506	0.00058547	354.7043333224944	47.395	0.15388	49.371	49.282	49.435	1.976	0.15868	3.5892E-05	NaN	0.79363	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	166520	+		26043	8461	12805	12860							0.03122189980024359
PPPFLELLP	9	Unmodified	_PPPFLELLP_					0	0	0		ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8027221560478	2	511.799686	1021.58482	4.4909	0.0022984	2.2824	0.0011681	6.7733	0.0034666	511.8007067248202	93.593	0.54437	94.465	94.097	94.641	0.87176					51	16	4	0	0	0	0.34572	3	39351	39351;39391;39446		23.148	6.2061	1	6111000			26044	1877	12806	12861	29862;29863;29864	29862					0.07489003113801118
PPPFLELLP	9	Unmodified	_PPPFLELLP_					0	0	0		ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8035766482353	2	511.799686	1021.58482	4.4984	0.0023023	2.3142	0.0011844	6.8126	0.0034867	511.80082411466566	94.069	0.50248	94.81	94.51	95.013	0.74124					52	15	4	0	0	0	0.34572	2	39548	39548;39602		23.148	2.2772	1	3625400			26045	1877	12806	12861	29865;29866	29865					0.07489003113801118
PPPFLELLP	9	Unmodified	_PPPFLELLP_					0	0	0		ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8032104372978	2	511.799686	1021.58482	3.6553	0.0018708	2.9291	0.0014991	6.5844	0.0033699	511.8012079453195	93.093	0.54142	94.37	94.038	94.58	1.277					53	16	4	0	0	0	0.34572	3	39143	39143;39192;39235		23.148	6.2061	1	5602300			26046	1877	12806	12861	29867;29868;29869	29867					0.07489003113801118
PPPFLELLP	9	Unmodified	_PPPFLELLP_					0	0	0		ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	ENSG00000114656|ENST00000645291|CFAP92	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8022338747978	2	511.799686	1021.58482	3.6544	0.0018703	2.4148	0.0012359	6.0693	0.0031063	511.80104841438896	93.511	0.49431	94.788	94.58	95.074	1.277					46	15	4	0	0	0	0.34572	3	39339	39289;39339;39390		23.148	6.2061	1	4601100			26047	1877	12806	12861	29870;29871;29872	29871					0.07489003113801118
PPPGGAAA	8	Unmodified	_PPPGGAAA_					0	0	0			REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	REV__nc|ENSG00000064687|Q8IZY2-2|ABCA7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	637.4707519412041	1	637.330402	636.323125	1.5188	0.00096799	-3.3754	-0.0021512	-1.8566	-0.0011833	637.3240206459552	103.62	0.053741	103.62	103.58	103.63	0					4	2	2	0	0	0	2.3239	1	43544	43544		0	0	1	815950	+		26048	8662	12807	12862	29873	29873					-0.009583584624465402
PPPGRGPR	8	Unmodified	_PPPGRGPR_					0	0	0		ENST00000550078.2_2_1:203764919-203765303:+|nuORF	ENST00000550078.2_2_1:203764919-203765303:+|nuORF	ENST00000550078.2_2_1:203764919-203765303:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.2393371462822	2	417.240661	832.46677	1.2295	0.000513	-3.4008	-0.001419	-2.1713	-0.00090595	417.238873843555	68.957	0.6408	70.81	70.558	71.199	1.853					45	20	3	0	0	0	0.88587	1	28955	28955		5.2307	0	1	6016300			26049	7259	12808	12863	29874	29874					0.043834883685121895
PPPIVVWQ	8	Unmodified	_PPPIVVWQ_					0	0	0			REV__ENSG00000103522|ENST00000337929|IL21R	REV__ENSG00000103522|ENST00000337929|IL21R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	467.7392761111259	2	468.271096	934.527639	2.928	0.0013711	-2.7235	-0.0012753	0.20454	9.5782E-05	468.269609482468	50.307	0.2828	51.699	51.516	51.798	1.3918					12	8	2	0	0	0	2.3239	1	21008	21008		22.453	0	1	663850	+		26050	9110	12809	12864	29875	29875					0.057755806280852084
PPPLDVWQ	8	Unmodified	_PPPLDVWQ_					0	0	0			REV__ENSG00000066735|ENST00000423312|KIF26A	REV__ENSG00000066735|ENST00000423312|KIF26A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1996337771416	2	476.25036	950.486168	1.777	0.00084632	1.0207	0.00048609	2.7977	0.0013324	476.24904974783624	49.699	0.96076	51.676	51.349	52.31	1.9772					50	30	3	0	0	0	2.3239	1	20899	20899		2.5775	0	1	1234500	+		26051	8687	12810	12865	29876	29876					0.00894399868752771
PPPLNGFLFEA	11	Unmodified	_PPPLNGFLFEA_					0	0	0		ENST00000233813.4_1_2:217541158-217541338:-|nuORF	ENST00000233813.4_1_2:217541158-217541338:-|nuORF	ENST00000233813.4_1_2:217541158-217541338:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	601.3204833865166	2	601.316232	1200.61791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.604	1	46.604	46.104	47.104	0								0	0	0	0.63775	1	19482	19482		3.2813	1.4371	1				26052	5554	12811	12866	29877	29877					0.025625851658787724
PPPMASLGSL	10	Unmodified	_PPPMASLGSL_					0	0	0		tr|A0A7D6VW75|A0A7D6VW75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02920PE=3SV=1	tr|A0A7D6VW75|A0A7D6VW75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02920PE=3SV=1	tr|A0A7D6VW75|A0A7D6VW75_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02920PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2582580447197	2	485.257328	968.500103	1.6869	0.00081859	0.56043	0.00027195	2.2473	0.0010905	485.2576903914036	41.856	1.6619	43.749	43.269	44.931	1.8927					87	53	2	0	0	0	0.77604	1	17638	17638		14.838	1.3304	1	4966200			26053	16972	12812	12867	29878	29878					0.014593093055395912
PPPPPALRPRL	11	Unmodified	_PPPPPALRPRL_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;ENST00000587811.1_1_19:14593203-14593794:-|nuORF	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.8735229372978	2	605.874582	1209.73461	2.8442	0.0017232	-3.5474	-0.0021493	-0.70326	-0.00042609	605.8720612191817	85.213	0.60019	85.213	84.972	85.572	0					36	18	3	0	0	0	1.0031	1	35500	35500		3.5965	1.5367	1	1633200			26054	2182	12813	12868	29879	29879					0.13813368176261065
PPPPPIARAIC	11	Unmodified	_PPPPPIARAIC_					0	0	0		ENST00000457130.2_1_X:143922603-143922738:+|nuORF	ENST00000457130.2_1_X:143922603-143922738:+|nuORF	ENST00000457130.2_1_X:143922603-143922738:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3235961794853	2	566.320794	1130.62703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.04	1	112.19	111.69	112.69	0.14929								0	0	0	0.63775	1	48549	48549		3.5965	0	1				26055	6646	12814	12869	29880	29880					0.06694655250521464
PPPPPPAPTHR	11	Unmodified	_PPPPPPAPTHR_					0	0	0		ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.3205444216728	2	582.31964	1162.62473	1.6567	0.00096472	-0.55046	-0.00032054	1.1062	0.00064417	582.3193814670557	44.813	1.2341	45.14	44.66	45.894	0.32674					81	41	3	0	0	0	0.89563	1	18919	18919		10.074	1.9184	1	15404000			26056	6352	12815	12870	29881	29881					0.04991942837068564
PPPPPPPLAAY	11	Unmodified	_PPPPPPPLAAY_					0	0	0		ENSG00000205922|ENST00000382349|ONECUT3	ENSG00000205922|ENST00000382349|ONECUT3	ENSG00000205922|ENST00000382349|ONECUT3	MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8108398318291	2	558.808042	1115.60153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.226	1	40.522	40.022	41.022	1.2961								0	0	0	0.63771	1	16456	16456		10.824	0.75	1				26057	5191	12816	12871	29882	29882					0.04835503999743196
PPPPPPPPPRD	11	Unmodified	_PPPPPPPPPRD_					0	0	0		ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|3|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|2|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|4|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|6|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|5|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|1|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|7|intron	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8166381716728	2	582.314023	1162.61349	2.3615	0.0013751	3.0894	0.001799	5.4509	0.0031741	582.8178389230726	45.149	0.76914	46.514	46.118	46.887	1.3653					53	23	3	0	0	0	0.47055	1	18865	18865		24.882	0	1	1368600			26058	571	12817	12872	29883	29883					0.03869120742933774
PPPPPPPPPRD	11	Unmodified	_PPPPPPPPPRD_					0	0	0		ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|3|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|2|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|4|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|6|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|5|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|1|intron;ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|7|intron	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	ENSG00000011451.21,WIZ,chr19,-,I7.1,15432762,15433164|90|6.04|8|intron	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8204223513603	2	582.314023	1162.61349	2.0208	0.0011767	2.7766	0.0016168	4.7973	0.0027935	582.8178658666968	44.594	0.73352	46.553	46.162	46.896	1.9596					42	22	3	0	0	0	0.80586	2	18639	18588;18639		15.248	0	1	990900			26059	571	12817	12872	29884;29885	29885					0.03869120742933774
PPPPPPRRSY	10	Unmodified	_PPPPPPRRSY_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8209106326103	2	582.31964	1162.62473	1.6567	0.00096472	-0.55046	-0.00032054	1.1062	0.00064417	582.3193814670557	44.813	1.2341	45.14	44.66	45.894	0.32674					81	41	3	0	0	0	0.81324	2	18710	18710;19041		10.824	1.4408	1	15404000			26060	2109	12818	12873	29886;29887	29886					0.04991942837091301
PPPPPPRRSY	10	Unmodified	_PPPPPPRRSY_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8207885622978	2	582.31964	1162.62473	1.7976	0.0010468	-1.535	-0.00089387	0.26258	0.00015291	582.3192375087617	42.793	1.5138	44.714	44.133	45.647	1.9211					81	49	3	0	0	0	0.76954	2	18138	17825;18138		15.248	1.6336	1	8119300			26061	2109	12818	12873	29888;29889	29889					0.04991942837091301
PPPPPRLQLPL	11	Unmodified	_PPPPPRLQLPL_					0	0	0			REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF	REV__ENST00000451786.5_1_7:130793498-130794893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8816406130791	2	612.876791	1223.73903	3.2992	0.002022	3.3207	0.0020352	6.6199	0.0040572	612.8786866925168	91.352	0.52451	92.718	92.438	92.963	1.366					53	16	4	0	0	0	1.0031	2	38382	38382;38536		3.5965	1.2938	1	15937000	+		26062	13139	12819	12874	29890;29891	29890					0.1361083259919269
PPPPPRLTPV	10	Unmodified	_PPPPPRLTPV_					0	0	0		nc|ENSG00000184838|Q569H4-2|PRR16;nc|ENSG00000184838|Q569H4-3|PRR16;ENSG00000184838|ENST00000407149|PRR16	nc|ENSG00000184838|Q569H4-2|PRR16	nc|ENSG00000184838|Q569H4-2|PRR16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	357.5504943728447	3	357.550082	1069.62842	1.0875	0.00038885	0.89491	0.00031997	1.9825	0.00070883	357.55025055240526	39.965	1.007	41.276	40.907	41.914	1.3102					47	32	2	0	0	0	0.88579	1	16788	16788		1.4551	0	1	1716400			26063	4709	12820	12875	29892	29892					0.09638612610933706
PPPRAPRRYHF	11	Unmodified	_PPPRAPRRYHF_					0	0	0			REV__ENST00000555918.1_1_14:36295663-36295729:-|nuORF	REV__ENST00000555918.1_1_14:36295663-36295729:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.3855468630791	2	697.383637	1392.75272	1.9555	0.0013638	0.59545	0.00041526	2.551	0.001779	697.3840526396834	54.866	0.71276	55.187	54.962	55.675	0.32088					64	24	4	0	0	0	0.96769	1	23076	23076		5.7319	0	1	8341500	+		26064	13869	12821	12876	29893	29893					0.07205503150953518
PPPRLHLLRP	10	Unmodified	_PPPRLHLLRP_					0	0	0		ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	ENST00000392432.6_1_3:194349154-194354092:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2510253787041	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.094	1	34.094	33.594	34.594	0								0	0	0	0.66218	1	14288	14288		0.77653	0.078866	1				26065	6257	12822	12877	29894	29894					0.14536787896122405
PPPRRRRT	8	Unmodified	_PPPRRRRT_					0	0	0		nc|ENSG00000133226|Q8IYB3-2|SRRM1;ENSG00000133226|ENST00000323848|SRRM1	nc|ENSG00000133226|Q8IYB3-2|SRRM1	nc|ENSG00000133226|Q8IYB3-2|SRRM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1387817263603	2	518.317766	1034.62098	2.2966	0.0011904	0.21545	0.00011167	2.5121	0.0013021	518.3189652776505	81.948	0.58414	82.228	81.844	82.428	0.2802					36	18	3	0	0	0	2.3239	1	34313	34313		0.79363	0	1	2727200			26066	2565	12823	12878	29895	29895					0.10505317853903762
PPPRWARRRRR	11	Unmodified	_PPPRWARRRRR_					0	0	0		ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9726745486259	3	501.97126	1502.89195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.859	1	50.859	50.359	51.359	0								0	0	0	0.63775	1	21213	21213		0.45452	0	1				26067	5488	12824	12879	29896	29896					0.1606188555897461
PPPRWARRRRR	11	Unmodified	_PPPRWARRRRR_					0	0	0		ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	ENSG00000284024|ENST00000640019|MSANTD7	MSMS	GG20161007_CRH_Patient100_A02_01	1	501.9732238650322	3	501.97126	1502.89195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.986	1	51.986	51.486	52.486	0								0	0	0	0.63775	1	21681	21681		0.45452	0	1				26068	5488	12824	12879	29897	29897					0.1606188555897461
PPPTCTQLL	9	Unmodified	_PPPTCTQLL_					0	0	0			REV__ENST00000342665.4_2_20:307553-308057:+|nuORF	REV__ENST00000342665.4_2_20:307553-308057:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2573119997978	2	485.257328	968.500103	1.9452	0.00094394	0.49972	0.00024249	2.445	0.0011864	485.2576060170659	42.152	1.6756	43.492	42.987	44.663	1.3399					99	53	2	0	0	0	0.68551	1	17528	17528		7.9102	0	1	6327100	+		26069	12506	12825	12880	29898	29898					0.014593093055623285
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9094116091728	2	685.910019	1369.80549	2.4567	0.0016851	-2.0612	-0.0014138	0.39551	0.00027128	685.9081370459064	83.221	1.4749	83.221	82.277	83.752	0					104	47	3	0	0	0	1.0174	2	34642	34642;34689		2.7352	2.2104	1	2273600	+		26070	10703	12826	12881	29899;29900	29899					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9099609255791	2	685.910019	1369.80549	2.7523	0.0018878	-2.1773	-0.0014934	0.57504	0.00039442	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.0366	2	35827	35827;35958		1.1933	0.66858	1	4137900	+		26071	10703	12826	12881	29901;29902	29901					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9111816287041	2	685.910019	1369.80549	2.2313	0.0015305	-1.8202	-0.0012485	0.41105	0.00028194	685.9088979398654	82.982	1.3835	83.252	82.573	83.956	0.27029					122	44	3	0	0	0	1.0366	2	34724	34724;34883		1.1933	0.66858	1	1896900	+		26072	10703	12826	12881	29903;29904	29903					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9100829958916	2	685.910019	1369.80549	2.4966	0.0017124	-1.6735	-0.0011479	0.82306	0.00056454	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	1.0174	3	35597	35597;35688;35793		2.7352	1.5419	1	4704100	+		26073	10703	12826	12881	29905;29906;29907	29905					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9092285037041	2	685.910019	1369.80549	2.5108	0.0017222	-2.691	-0.0018458	-0.18021	-0.00012361	685.9076374213724	85.874	0.72399	86.126	85.975	86.699	0.25227					45	23	2	0	0	0	1.0366	2	35935	35935;35990		1.1933	0.66858	1	1339000	+		26074	10703	12826	12881	29908;29909	29908					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9083740115166	2	685.910019	1369.80549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.349	1	85.508	85.008	86.008	1.159								0	0	0	0.63775	1	35396	35396		1.1933	0	1		+		26075	10703	12826	12881	29910	29910					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9090453982353	2	685.910019	1369.80549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.692	1	85.851	85.351	86.351	1.159								0	0	0	0.63775	1	35537	35537		2.7352	0	1		+		26076	10703	12826	12881	29911	29911					0.1353746121376389
PPQPKHKVRRQ	11	Unmodified	_PPQPKHKVRRQ_					0	0	0			REV__ENSG00000163873|ENST00000373091|GRIK3	REV__ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.9106933474541	2	685.910019	1369.80549	1.6306	0.0011185	-1.706	-0.0011701	-0.075327	-5.1668E-05	685.9088144080557	84.208	1.3885	85.817	85.138	86.527	1.6088					100	45	3	0	0	0	1.0174	1	35307	35307		2.7352	1.5419	1	6001400	+		26077	10703	12826	12881	29912	29912					0.1353746121376389
PPQPRVKTL	9	Unmodified	_PPQPRVKTL_					0	0	0		ENST00000321930.4_17:78977795-78978311:+|nuORF	ENST00000321930.4_17:78977795-78978311:+|nuORF	ENST00000321930.4_17:78977795-78978311:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.6248046755791	2	518.319109	1034.62366	1.7278	0.00089557	3.0431	0.0015773	4.7709	0.0024729	518.3212254809628	48.371	0.27681	49.758	49.618	49.895	1.388					16	8	2	0	0	0	0.11333	1	20219	20219		13.508	6.7847	1	1154300			26078	5850	12827	12882	29913	29913					0.10773728468188892
PPQPSARVRVA	11	Unmodified	_PPQPSARVRVA_					0	0	0		ENST00000355624.7_1_10:119805904-119806039:-|nuORF	ENST00000355624.7_1_10:119805904-119806039:-|nuORF	ENST00000355624.7_1_10:119805904-119806039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3447143435478	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	1.037	1	32168	32168		1.0715	0	1	9601000			26079	5980	12828	12883	29914	29914					0.09147016757151505
PPQRHLRAA	9	Unmodified	_PPQRHLRAA_					0	0	0			REV__HERVH-int_dup1805|chr4:134680244-134683143:-|1.6874641175724838|0.0814635120779963|4.37|415.0|66|3|sense	REV__HERVH-int_dup1805|chr4:134680244-134683143:-|1.6874641175724838|0.0814635120779963|4.37|415.0|66|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3044311404228	2	523.304324	1044.5941	1.6925	0.00088571	-1.6361	-0.0008562	0.056397	2.9513E-05	523.303552086807	68.689	1.446	70.542	69.657	71.103	1.853					108	46	3	0	0	0	0.7849	1	28734	28734		3.9444	0.66309	1	7991600	+		26080	14188	12829	12884	29915	29915					0.0735820924271593
PPQRRRLARRR	11	Unmodified	_PPQRRRLARRR_					0	0	0		ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.9761535525322	3	487.974781	1460.90251	3.459	0.0016879	-0.88149	-0.00043014	2.5775	0.0012578	487.97409607055437	97.641	0.15793	97.731	97.62	97.778	0.090881					14	4	4	0	0	0	1.039	1	40834	40834		0.45452	0.046251	1	41562000			26081	6272	12830	12885	29916	29916					0.19049868213437549
PPQRRRLARRR	11	Unmodified	_PPQRRRLARRR_					0	0	0		ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.9738952517509	3	487.974781	1460.90251	3.7708	0.00184	-3.21	-0.0015664	0.56083	0.00027367	487.9725652483824	97.497	0.13404	97.782	97.694	97.828	0.28442					12	4	4	0	0	0	1.039	1	41026	41026		0.45452	0	1	14567000			26082	6272	12830	12885	29917	29917					0.19049868213437549
PPQRRRLARRR	11	Unmodified	_PPQRRRLARRR_					0	0	0		ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	ENST00000393606.7_1_17:42294008-42297052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.9742309451103	3	487.974781	1460.90251	3.2738	0.0015975	-3.3065	-0.0016135	-0.032685	-1.5949E-05	487.9724680393388	97.395	0.090256	97.701	97.654	97.744	0.3062					6	2	3	0	0	0	1.039	1	40974	40974		0.45452	0	1	13194000			26083	6272	12830	12885	29918	29918					0.19049868213437549
PPRAKKKSH	9	Unmodified	_PPRAKKKSH_					0	0	0			REV__ENST00000504750.5_1_4:190947571-190948256:-|nuORF	REV__ENST00000504750.5_1_4:190947571-190948256:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	350.2181884646416	3	350.217325	1047.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.596	1	63.596	63.096	64.096	0								0	0	0	0.42693	1	26512	26512		0.86438	0.46366	1		+		26084	13528	12831	12886	29919	29919					0.1082366641956014
PPRAKKKSH	9	Unmodified	_PPRAKKKSH_					0	0	0			REV__ENST00000504750.5_1_4:190947571-190948256:-|nuORF	REV__ENST00000504750.5_1_4:190947571-190948256:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2181884646416	3	350.217325	1047.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.091	1	61.42	60.92	61.92	0.32974								0	0	0	0.42693	1	25596	25596		0.86438	0.46366	1		+		26085	13528	12831	12886	29920	29920					0.1082366641956014
PPRPRTRPRRR	11	Unmodified	_PPRPRTRPRRR_					0	0	0			REV__ENSG00000188263|ENST00000695950|IL17REL	REV__ENSG00000188263|ENST00000695950|IL17REL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3011352419853	3	482.299265	1443.87596	3.5216	0.0016984	-1.1503	-0.0005548	2.3712	0.0011436	482.2985812134103	97.639	0.18826	97.73	97.62	97.809	0.090881					23	5	6	0	0	0	1.039	1	40833	40833		0.45452	0.046251	1	33927000	+		26086	11564	12832	12887	29921	29921					0.1717817932210437
PPRRQWWRPWL	11	Unmodified	_PPRRQWWRPWL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.6253539919853	3	526.624866	1576.85277	2.0364	0.0010724	-0.53053	-0.00027939	1.5059	0.00079303	526.6245816205536	45.541	0.57404	45.541	45.342	45.916	0					39	17	3	0	0	0	0.96769	2	19024	19024;19074		2.6312	1.6177	1	5177600			26087	1428	12833	12888	29922;29923	29922					0.08741740484788352
PPRRQWWRPWL	11	Unmodified	_PPRRQWWRPWL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.6258422732353	3	526.624866	1576.85277	1.9313	0.0010171	-0.070942	-3.736E-05	1.8604	0.00097971	526.9591028993932	44.893	0.70997	45.219	44.983	45.693	0.32674					58	23	5	0	0	0	0.84637	3	18806	18806;18854;18902		7.0371	6.5311	1	5754000			26088	1428	12833	12888	29924;29925;29926	29924					0.08741740484788352
PPRRQWWRPWL	11	Unmodified	_PPRRQWWRPWL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.6243163943291	3	526.624866	1576.85277	1.79	0.00094266	-0.93247	-0.00049106	0.85753	0.00045159	526.9589424756541	43.338	0.32645	44.692	44.499	44.825	1.3536					27	10	4	0	0	0	0.96769	2	18145	18145;18194		2.6312	1.6177	1	4059000			26089	1428	12833	12888	29927;29928	29927					0.08741740484788352
PPRRQWWRPWL	11	Unmodified	_PPRRQWWRPWL_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.6251708865166	3	526.624866	1576.85277	1.8959	0.00099844	-0.43709	-0.00023018	1.4588	0.00076826	526.9590454556809	42.679	0.36504	44.601	44.416	44.781	1.9211					22	9	3	0	0	0	0.91768	1	17870	17870		4.4062	4.3113	1	4174100			26090	1428	12833	12888	29929	29929					0.08741740484788352
PPRRRRIK	8	Unmodified	_PPRRRRIK_					0	0	0		ENSG00000196074|ENST00000357552|SYCP2	ENSG00000196074|ENST00000357552|SYCP2	ENSG00000196074|ENST00000357552|SYCP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2387573122978	3	360.240464	1077.69956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.607	1	95.607	95.107	96.107	0								0	0	0	1.0178	1	39962	39962		0.40072	0	1				26091	4908	12834	12889	29930	29930					0.16382170158954068
PPRRTLRRRWR	11	Unmodified	_PPRRTLRRRWR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1526672244072	4	388.24073	1548.93381	0.020431	7.9322E-06	0.59031	0.00022918	0.61074	0.00023711	388.2401922077365	45.453	0.72505	45.453	44.964	45.689	0					40	22	2	0	0	0	0.14606	1	18907	18907		0	0	1	1178900	+		26092	12715	12835	12890	29931	29931					0.181304412475356
PPRRTLRRRWR	11	Unmodified	_PPRRTLRRRWR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1337463259697	5	310.794039	1548.93381	1.345	0.00041803	0.50138	0.00015583	1.8464	0.00057386	310.7945110225356	44.674	0.22078	46.039	45.867	46.088	1.3653					8	6	2	0	0	0	0.14606	1	18696	18696		0	0	1	257210	+		26093	12715	12835	12890	29932	29932					0.181304412475356
PPRSSATRHR	10	Unmodified	_PPRSSATRHR_					0	0	0			REV__ENST00000392650.7_1_17:71334055-71334301:-|nuORF	REV__ENST00000392650.7_1_17:71334055-71334301:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8208495974541	2	582.82087	1163.62719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.903	1	44.227	43.727	44.727	0.32389								0	0	0	0.66087	1	18429	18429		2.9952	1.151	1		+		26094	12800	12836	12891	29933	29933					0.05191791294760151
PPRVIVFIV	9	Unmodified	_PPRVIVFIV_					0	0	0			REV__tr|A0A553SG54|A0A553SG54_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10165PE=4SV=1	REV__tr|A0A553SG54|A0A553SG54_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_10165PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2269775271416	3	347.226939	1038.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.221	1	51.549	51.049	52.049	0.32824								0	0	0	0.42693	1	21458	21458		1.0715	0	1		+		26095	14732	12837	12892	29934	29934					0.14120390995981325
PPSRLRRRR	9	Unmodified	_PPSRLRRRR_					0	0	0		ENST00000426250.3_1_12:72665645-72666709:-|nuORF	ENST00000426250.3_1_12:72665645-72666709:-|nuORF	ENST00000426250.3_1_12:72665645-72666709:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.2519409060478	3	398.586523	1192.73774	0.68539	0.00027319	-3.3737	-0.0013447	-2.6883	-0.0010715	398.5852853093219	32.739	0.37238	34.564	34.303	34.675	1.8246					33	18	2	0	0	0	0.11938	1	13615	13615		0.26902	0	1	4818500			26096	6467	12838	12893	29935	29935					0.14908056073636544
PPSSPYCG	8	Unmodified	_PPSSPYCG_					0	0	0		ENSG00000102699|ENST00000381989|PARP4	ENSG00000102699|ENST00000381989|PARP4	ENSG00000102699|ENST00000381989|PARP4	MSMS	GG20161007_CRH_Patient100_W632_01	3	404.1704589724541	2	404.170721	806.32689	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.29	1	104.45	103.95	104.95	0.16055								0	0	0	1.0178	1	44141	44141		0.69038	0	1				26097	1397	12839	12894	29936	29936					-0.08402056750878728
PPSVVNPMVLF	11	Unmodified	_PPSVVNPMVLF_					0	0	0		ENST00000322886.11_2_12:77417263-77417425:-|nuORF	ENST00000322886.11_2_12:77417263-77417425:-|nuORF	ENST00000322886.11_2_12:77417263-77417425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8312255740166	2	600.328285	1198.64202	1.8781	0.0011275	2.6018	0.0015619	4.4799	0.0026894	600.8301217592946	41.571	0.44222	43.464	43.325	43.767	1.8927					23	13	3	0	0	0	0.58697	1	17420	17420		21.537	3.402	1	1327000			26098	5859	12840	12895	29937	29937					0.050641023278785724
PPVKKRKRKCL	11	Unmodified	_PPVKKRKRKCL_					0	0	0		ENST00000419413.1_1_X:136523419-136523611:-|nuORF;ENST00000488373.5_1_7:6415539-6442074:+|nuORF;ENSG00000136238|ENST00000348035|RAC1;nc|ENSG00000136238|P63000-2|RAC1	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	ENST00000419413.1_1_X:136523419-136523611:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.9708740115166	4	338.972234	1351.85983	-1.8818	-0.00063789	-2.9465	-0.00099878	-4.8283	-0.0016367	338.97134967247854	33.714	0.8035	33.714	33.328	34.131	0					99	25	5	0	0	0	1.0362	1	14173	14173		1.3296	0.11481	1	4120500			26099	2715	12841	12896	29938	29938					0.19797337041018181
PPVLYLWPAPI	11	Unmodified	_PPVLYLWPAPI_					0	0	0		ENST00000374810.7_1_20:33298341-33298617:+|nuORF	ENST00000374810.7_1_20:33298341-33298617:+|nuORF	ENST00000374810.7_1_20:33298341-33298617:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3702880740166	2	633.368267	1264.72198	2.4138	0.0015288	1.4976	0.00094851	3.9114	0.0024773	633.3690434173299	80.495	1.7494	81.746	80.955	82.705	1.2512					154	56	5	0	0	0	1.0031	2	33964	33964;34132		3.5965	0.8613	1	8479200			26100	6176	12842	12897	29939;29940	29939					0.10020911993365189
PPVPKVSV	8	Unmodified	_PPVPKVSV_					0	0	0		ENST00000592962.5_1_19:36604659-36605276:-|nuORF	ENST00000592962.5_1_19:36604659-36605276:-|nuORF	ENST00000592962.5_1_19:36604659-36605276:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	411.7577087283134	2	411.757821	821.501089	0.024232	9.9778E-06	0.83497	0.00034381	0.8592	0.00035378	411.7579451141179	99.603	0.14455	99.603	99.502	99.646	0					7	4	2	0	0	0	0.89176	1	41697	41697		0.79363	0	1	2163700			26101	7498	12843	12898	29941	29941					0.08319891736766749
PPVPKVSV	8	Unmodified	_PPVPKVSV_					0	0	0		ENST00000592962.5_1_19:36604659-36605276:-|nuORF	ENST00000592962.5_1_19:36604659-36605276:-|nuORF	ENST00000592962.5_1_19:36604659-36605276:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	411.7599975466728	2	411.757821	821.501089	2.9486	0.0012141	1.1111	0.00045749	4.0596	0.0016716	411.7581035952721	99.54	0.119	99.612	99.536	99.655	0.072716					5	3	2	0	0	0	0.89176	1	41686	41686		0.79363	0.10326	1	1759200			26102	7498	12843	12898	29942	29942					0.08319891736766749
PPVVGKVK	8	Unmodified	_PPVVGKVK_					0	0	0		ENSG00000102967|ENST00000219240|DHODH	ENSG00000102967|ENST00000219240|DHODH	ENSG00000102967|ENST00000219240|DHODH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2749511599541	2	412.273638	822.532724	2.9198	0.0012038	0.59364	0.00024474	3.5135	0.0014485	412.274355361286	108.21	0.58214	108.37	108.29	108.87	0.15781					46	32	2	0	0	0	0.89176	1	46808	46808		0.79363	0.10326	1	44629000			26103	1408	12844	12899	29943	29943					0.1143588449069739
PPVVGKVK	8	Unmodified	_PPVVGKVK_					0	0	0		ENSG00000102967|ENST00000219240|DHODH	ENSG00000102967|ENST00000219240|DHODH	ENSG00000102967|ENST00000219240|DHODH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	412.273638	822.532724	3.1743	0.0013087	1.4037	0.0005787	4.578	0.0018874	412.2742656432146	108.29	0.28869	108.45	108.27	108.56	0.15795	0.037174	0.00046473	NaN	0.79363	25	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6350000			26104	1408	12844	12899							0.1143588449069739
PPWALRFG	8	Unmodified	_PPWALRFG_					0	0	0			REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1775695681572	3	315.176467	942.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.07	1	113.24	112.74	113.74	0.16914								0	0	0	1.0178	1	49036	49036		0.45834	0	1		+		26105	11277	12845	12900	29944	29944					0.034018296881413335
PPWALRFG	8	Unmodified	_PPWALRFG_					0	0	0			REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1774169802666	3	315.176467	942.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	114.15	113.65	114.65	0.17579								0	0	0	1.0178	1	49400	49400		0.45834	0	1		+		26106	11277	12845	12900	29945	29945					0.034018296881413335
PPWALRFG	8	Unmodified	_PPWALRFG_					0	0	0			REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1778442263603	3	315.176467	942.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.82	1	117.02	116.52	117.52	0.19572								0	0	0	1.0178	1	50541	50541		0.45834	0	1		+		26107	11277	12845	12900	29946	29946					0.034018296881413335
PPWALRFG	8	Unmodified	_PPWALRFG_					0	0	0			REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	REV__nc|ENSG00000179403|Q6PCB0-2|VWA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1769286990166	3	315.176467	942.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.95	1	117.16	116.66	117.66	0.21096								0	0	0	1.0178	1	50594	50594		0.45834	0	1		+		26108	11277	12845	12900	29947	29947					0.034018296881413335
PPWVRSRFPQ	10	Unmodified	_PPWVRSRFPQ_					0	0	0			REV__ENST00000480222.1_1_11:116738660-116744319:-|nuORF	REV__ENST00000480222.1_1_11:116738660-116744319:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	424.3061706423759	3	423.899885	1268.67783	0.10464	4.4357E-05	-1.3425	-0.00056908	-1.2379	-0.00052473	423.8992458046748	12.218	0.15464	13.005	12.941	13.095	0.78751					6	4	2	0	0	0	0.12556	1	5080	5080		0.13989	0	1	212120	+		26109	10606	12846	12901	29948	29948					0.05423320619729566
PPYRNRFRRRS	11	Unmodified	_PPYRNRFRRRS_					0	0	0		CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.6188537478447	3	502.283392	1503.82835	2.1826	0.0010963	2.825	0.0014189	5.0076	0.0025152	502.28551368862827	43.809	0.33728	45.163	44.947	45.284	1.3536					20	10	3	0	0	0	0.80586	1	18370	18370		8.7518	5.6795	1	2756700			26110	113	12847	12902	29949	29949					0.09658480331222563
PPYRNRFRRRS	11	Unmodified	_PPYRNRFRRRS_					0	0	0		CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.6201049685478	3	502.283392	1503.82835	1.6872	0.00084745	4.4291	0.0022246	6.1162	0.0030721	502.28619951201506	43.134	0.33141	45.07	44.916	45.247	1.9363					22	10	3	0	0	0	0.99329	1	18097	18097		1.9275	0.59786	1	2129700			26111	113	12847	12902	29950	29950					0.09658480331222563
PPYTVVYFPVR	11	Unmodified	_PPYTVVYFPVR_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	668.9606811404228	2	669.366256	1336.71796	2.3384	0.0015653	-1.255	-0.00084004	1.0834	0.00072521	669.8670598938485	60.191	0.27824	60.191	60.069	60.348	0					16	9	2	0	0	0	0.09857	1	25075	25075		47.732	38.349	1	999320			26112	1049	12848	12903	29951	29951					0.06306822499618647
PPYTVVYFPVR	11	Unmodified	_PPYTVVYFPVR_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	669.3662597537041	2	669.366256	1336.71796	2.2956	0.0015366	0.30065	0.00020124	2.5963	0.0017378	669.3663375731884	59.522	0.44078	59.847	59.649	60.09	0.32554					30	13	3	0	0	0	0.0080417	2	24928	24928;24982		107.56	81.295	1	2129500			26113	1049	12848	12903	29952;29953	29952					0.06306822499618647
PPYTVVYFPVR	11	Unmodified	_PPYTVVYFPVR_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	669.8675414919853	2	669.366256	1336.71796	0.52637	0.00035233	-0.028818	-1.929E-05	0.49755	0.00033304	669.8679555716295	58.334	0.33125	59.752	59.578	59.909	1.4181					14	10	2	0	0	0	0.017927	1	24461	24461		100.71	79.172	1	2446500			26114	1049	12848	12903	29954	29954					0.06306822499618647
PPYWSLAL	8	Unmodified	_PPYWSLAL_					0	0	0			REV__ENSG00000172469|ENST00000358812|MANEA	REV__ENSG00000172469|ENST00000358812|MANEA	MSMS	GG20161007_CRH_Patient100_A02_01	1	473.7573425173759	2	473.755278	945.496004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.862	1	81.862	81.362	82.362	0								0	0	0	1.0178	1	34100	34100		14.582	0	1		+		26115	11067	12849	12904	29955	29955					0.02107587874127148
PPYYHYLIRVT	11	Unmodified	_PPYYHYLIRVT_					0	0	0		ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	711.3804809451103	2	711.382437	1420.75032	2.2125	0.001574	0.19597	0.00013941	2.4085	0.0017134	711.3824169621065	59.307	0.41291	59.307	59.099	59.512	0					36	12	4	0	0	0	0.80586	2	24699	24699;24747		15.248	1.6336	1	5197900			26116	7011	12850	12905	29956;29957	29956					0.056776099026365046
PPYYHYLIRVT	11	Unmodified	_PPYYHYLIRVT_					0	0	0		ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	711.8826782107353	2	711.382437	1420.75032	2.4413	0.0017367	-1.5251	-0.0010849	0.91626	0.00065181	711.3814293155458	58.703	0.47004	59.029	58.746	59.217	0.32554					44	15	4	0	0	0	0.62604	2	24596	24596;24634		20.415	6.7997	1	3950400			26117	7011	12850	12905	29958;29959	29958					0.056776099026365046
PPYYHYLIRVT	11	Unmodified	_PPYYHYLIRVT_					0	0	0		ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	711.3838378787041	2	711.382437	1420.75032	-0.074577	-5.3053E-05	-0.1136	-8.0815E-05	-0.18818	-0.00013387	711.3825393866748	57.475	0.18885	58.89	58.74	58.929	1.4145					10	6	2	0	0	0	0.80586	1	24102	24102		15.248	0	1	2779000			26118	7011	12850	12905	29960	29960					0.056776099026365046
PPYYHYLIRVT	11	Unmodified	_PPYYHYLIRVT_					0	0	0		ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	ENST00000507668.6_1_5:79438544-79438895:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	711.3813354372978	2	711.382437	1420.75032	0.083559	5.9443E-05	0.32153	0.00022873	0.40509	0.00028817	711.3819899604393	56.881	0.24245	58.849	58.721	58.964	1.9684					12	7	2	0	0	0	0.80586	1	23860	23860		15.248	3.0078	1	1984000			26119	7011	12850	12905	29961	29961					0.056776099026365046
PQAFSREL	8	Unmodified	_PQAFSREL_					0	0	0		tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	473.7190124392509	2	474.250892	946.48723	1.3362	0.0006337	0.24883	0.00011801	1.5851	0.00075171	474.25086710539836	22.798	0.33882	24.012	23.859	24.198	1.2145					18	10	3	0	0	0	2.3239	1	9512	9512		42.095	1.646	1	1208900			26120	16609	12851	12906	29962	29962					0.011846142376612079
PQAFSREL	8	Unmodified	_PQAFSREL_					0	0	0		tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	473.7190734744072	2	474.250892	946.48723	0.7317	0.00034701	0.70258	0.0003332	1.4343	0.00068021	474.25102922411577	22.37	0.27211	23.986	23.862	24.134	1.6158					16	8	3	0	0	0	2.3239	1	9310	9310		26.884	5.137	1	1047100			26121	16609	12851	12906	29963	29963					0.011846142376612079
PQALKFHRLR	10	Unmodified	_PQALKFHRLR_					0	0	0			REV__ENSG00000165757|ENST00000375377|JCAD	REV__ENSG00000165757|ENST00000375377|JCAD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1953307986259	4	317.195191	1264.75166	0.14832	4.7045E-05	1.8267	0.00057941	1.975	0.00062645	317.19572652283154	33.632	0.37411	35.455	35.255	35.629	1.8227					80	35	3	0	0	0	0.8974	1	14157	14157		1.7423	0.14999	1	55195000	+		26122	10795	12852	12907	29964	29964					0.12987288782073847
PQDLDAECL	9	Unmodified	_PQDLDAECL_					0	0	0		nc|ENSG00000167767|Q6KB66-3|KRT80;ENST00000466011.1_1_12:52565184-52579482:-|nuORF	nc|ENSG00000167767|Q6KB66-3|KRT80	nc|ENSG00000167767|Q6KB66-3|KRT80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.9730712771416	2	502.223682	1002.43281	2.3096	0.0011599	0.12906	6.4819E-05	2.4386	0.0012247	502.7265550281322	53.133	0.58653	53.456	53.202	53.789	0.32283					25	18	2	0	0	0	0.77526	1	22280	22280		4.3292	0	1	726440		+	26123	6702	12853	12908	29965	29965					-0.06830765696065555
PQDYINCAEVW	11	Unmodified	_PQDYINCAEVW_					0	0	0		ENSG00000103544|ENST00000417362|VPS35L;nc|ENSG00000103544|Q7Z3J2-2|VPS35L	ENSG00000103544|ENST00000417362|VPS35L	ENSG00000103544|ENST00000417362|VPS35L	MSMS	GG20161007_CRH_Patient100_A02_01	1	669.2937499880791	2	669.29517	1336.57579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.73	1	64.73	64.23	65.23	0								0	0	0	0.63775	1	26980	26980		2.9952	0	1				26124	1434	12854	12909	29966	29966					-0.07903758304860276
PQFPPIPPIFL	11	Unmodified	_PQFPPIPPIFL_					0	0	0		HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|31|1|sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|31|1|sense	HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|31|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3694946169853	2	633.368267	1264.72198	1.0752	0.000681	1.8197	0.0011526	2.8949	0.0018336	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	0.98155	1	33540	33540		4.897	1.6157	1	5927400			26125	7636	12855	12910	29967	29967					0.10020911993365189
PQILEVNFYQH	11	Unmodified	_PQILEVNFYQH_					0	0	0			REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3523437380791	2	694.353877	1386.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.399	1	70.399	69.899	70.899	0								0	0	0	0.63774	1	29316	29316		7.1017	1.3699	1		+		26126	9675	12856	12911	29968	29968					0.015321426262971727
PQILEVNFYQH	11	Unmodified	_PQILEVNFYQH_					0	0	0			REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3557617068291	2	694.353877	1386.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.02	1	115.02	114.52	115.52	0								0	0	0	0.63775	1	49646	49646		4.1895	0.31317	1		+		26127	9675	12856	12911	29969	29969					0.015321426262971727
PQILEVNFYQH	11	Unmodified	_PQILEVNFYQH_					0	0	0			REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3552123904228	2	694.353877	1386.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.15	1	118.15	117.65	118.65	0								0	0	0	0.63775	1	50918	50918		4.1895	1.1943	1		+		26128	9675	12856	12911	29970	29970					0.015321426262971727
PQILEVNFYQH	11	Unmodified	_PQILEVNFYQH_					0	0	0			REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	REV__ENST00000599899.5_1_19:6677895-6682275:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3550292849541	2	694.353877	1386.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.274	1	46.218	45.718	46.718	1.9438								0	0	0	0.63774	1	18561	18561		7.1017	1.3699	1		+		26129	9675	12856	12911	29971	29971					0.015321426262971727
PQIRKRRKIK	10	Unmodified	_PQIRKRRKIK_					0	0	0		HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9480468630791	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.245	1	40.245	39.745	40.745	0								0	0	0	0.66052	1	16862	16862		3.5965	0	1				26130	7648	12857	12912	29972	29972					0.23019215007184357
PQIRKRRKIK	10	Unmodified	_PQIRKRRKIK_					0	0	0		HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9469482302666	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.338	1	45.338	44.838	45.838	0								0	0	0	0.66052	1	18971	18971		3.5965	0.60125	1				26131	7648	12857	12912	29973	29973					0.23019215007184357
PQIRKRRKIK	10	Unmodified	_PQIRKRRKIK_					0	0	0		HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9465209841728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.044	1	54.044	53.544	54.544	0								0	0	0	0.66052	1	22529	22529		3.5965	0.60125	1				26132	7648	12857	12912	29974	29974					0.23019215007184357
PQIRKRRKIK	10	Unmodified	_PQIRKRRKIK_					0	0	0		HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9447509646416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.807	1	45.134	44.634	45.634	0.32674								0	0	0	0.66052	1	18816	18816		3.5965	0.60125	1				26133	7648	12857	12912	29975	29975					0.23019215007184357
PQIRKRRKIK	10	Unmodified	_PQIRKRRKIK_					0	0	0		HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	HIVEP1|p.M1034I|1|0.05|ENSG00000095951|chr6:12122897-12122897|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451782107353	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.136	1	45.463	44.963	45.963	0.32674								0	0	0	0.66052	1	18953	18953		3.5965	0	1				26134	7648	12857	12912	29976	29976					0.23019215007184357
PQIVVKCL	8	Unmodified	_PQIVVKCL_					0	0	0		SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant;ENSG00000021488|ENST00000023064|SLC7A9	SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2731811404228	2	450.272781	898.531009	2.5546	0.0011503	-0.082331	-3.7071E-05	2.4722	0.0011132	450.2732259615331	86.888	1.0321	86.888	86.519	87.551	0					72	40	3	0	0	0	0.89051	1	36177	36177		2.3027	0	1	8724700			26135	612	12858	12913	29977	29977					0.07768507410446546
PQKKIKKK	8	Unmodified	_PQKKIKKK_					0	0	0		AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|10|3|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|10|3|sense	AluSg7_dup2598|chr5:139545417-139545723:-|1.2409937977611976|0.1210314063817212|3.36|414.0|10|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3482543826103	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.959	1	92.15	91.65	92.65	0.19042								0	0	0	1.0178	1	38510	38510		0.69038	0	1				26136	44	12859	12914	29978	29978					0.18231195744556317
PQKLTTKKL	9	Unmodified	_PQKLTTKKL_					0	0	0		ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	ENSG00000111961|ENST00000367467|SASH1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	352.3395263552666	3	352.89737	1055.67028	-1.6489	-0.00058189	0.82184	0.00029002	-0.82706	-0.00029187	352.8979447050879	117.6	0.31443	117.6	117.4	117.72	0					10	9	2	0	0	0	0.11954	1	50626	50626		0.26902	0	1	109440			26137	1763	12860	12915	29979	29979					0.14467168299461264
PQKSYIVIK	9	Unmodified	_PQKSYIVIK_					0	0	0			REV__ENSG00000099381|ENST00000262519|SETD1A	REV__ENSG00000099381|ENST00000262519|SETD1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2230712771416	3	359.221853	1074.64373	-0.064562	-2.3192E-05	-2.5304	-0.00090897	-2.5949	-0.00093216	359.22100145004833	86.206	0.4492	86.206	85.978	86.427	0					39	14	3	0	0	0	0.82114	2	35876	35876;35974		2.4985	1.427	1	14343000	+		26138	8950	12861	12916	29980;29981	29980					0.1093947940810267
PQKTKKRATI	10	Unmodified	_PQKTKKRATI_					0	0	0		L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|12|2|sense	L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|12|2|sense	L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|12|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.8696777224541	2	585.869497	1169.72444	3.1402	0.0018397	-1.1561	-0.0006773	1.9841	0.0011624	585.8684660029035	107.47	0.21008	107.63	107.51	107.72	0.15781					30	10	4	0	0	0	0.88579	1	46269	46269		2.9952	1.5133	1	127260000			26139	7686	12862	12917	29982	29982					0.1463676045102602
PQKYKKKKKK	10	Unmodified	_PQKYKKKKKK_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|71|3|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|71|3|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|71|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	652.4340698122978	2	652.432264	1302.84998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.45	1	111.6	111.1	112.1	0.15038								0	0	0	0.6624	1	48300	48300		0.40072	0.050084	1				26140	7741	12863	12918	29983	29983					0.21066472307234108
PQLERKRTR	9	Unmodified	_PQLERKRTR_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	592.3555175662041	2	592.354545	1182.69454	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.121	1	53.444	52.944	53.944	0.32283								0	0	0	0.42693	1	22253	22253		3.5965	1.7523	1				26141	24	12864	12919	29984	29984					0.11049821505685031
PQLLPFWDSVW	11	Unmodified	_PQLLPFWDSVW_					0	0	0		nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3540527224541	2	694.355888	1386.69722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.116	1	44.037	43.537	44.537	1.9211								0	0	0	0.63774	1	17650	17650		8.1555	0.54658	1				26142	7814	12865	12920	29985	29985					0.019342321199701473
PQLLPFWDSVW	11	Unmodified	_PQLLPFWDSVW_					0	0	0		nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3535644412041	2	694.355888	1386.69722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.394	1	46.354	45.854	46.854	1.9596								0	0	0	0.63775	1	18610	18610		2.9952	0.26005	1				26143	7814	12865	12920	29986	29986					0.019342321199701473
PQLRVLLPA	9	Unmodified	_PQLRVLLPA_					0	0	0		ENSG00000237700|ENST00000437300|PRAMEF33;ENSG00000187545|ENST00000235347|PRAMEF10	ENSG00000237700|ENST00000437300|PRAMEF33	ENSG00000237700|ENST00000437300|PRAMEF33	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2197143435478	3	336.218443	1005.6335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.275	1	58.598	58.098	59.098	0.32298								0	0	0	0.42693	1	24426	24426		0.96228	0.26461	1				26144	4827	12866	12921	29987	29987					0.13090916473561265
PQPDVFPLF	9	Unmodified	_PQPDVFPLF_					0	0	0		ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2799560427666	2	530.279118	1058.54368	2.4256	0.0012863	0.68771	0.00036468	3.1133	0.0016509	530.2793526538684	85.163	0.43185	86.322	86.086	86.518	1.159					33	14	3	0	0	0	0.10993	2	35770	35707;35770		46.021	17.534	1	4688100			26145	5462	12867	12922	29988;29989	29989					0.016752420743159746
PQPDVFPLF	9	Unmodified	_PQPDVFPLF_					0	0	0		ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	ENSG00000275700|ENST00000619387|AATF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2807494997978	2	530.279118	1058.54368	2.8183	0.0014945	1.5943	0.00084541	4.4126	0.0023399	530.2796177446626	84.665	0.45782	86.262	86.002	86.46	1.5962					36	14	3	0	0	0	0.15635	3	35527	35482;35527;35589		37.974	16.227	1	2830400			26146	5462	12867	12922	29990;29991;29992	29991					0.016752420743159746
PQPLALRSMLL	11	Unmodified	_PQPLALRSMLL_					0	0	0			REV__nc|ENSG00000095752|P20809-2|IL11	REV__nc|ENSG00000095752|P20809-2|IL11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8702880740166	2	619.868108	1237.72166	2.1274	0.0013187	1.7958	0.0011131	3.9232	0.0024319	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	1.0366	2	32083	32083;32135		1.1933	0.735	1	3039400	+		26147	8932	12868	12923	29993;29994	29993					0.11231169001894159
PQPLALRSMLL	11	Unmodified	_PQPLALRSMLL_					0	0	0			REV__nc|ENSG00000095752|P20809-2|IL11	REV__nc|ENSG00000095752|P20809-2|IL11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8705932497978	2	619.868108	1237.72166	2.0915	0.0012964	1.8558	0.0011504	3.9473	0.0024468	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	1.0366	3	32806	32806;32856;32911		1.1933	1.1933	1	9211600	+		26148	8932	12868	12923	29995;29996;29997	29995					0.11231169001894159
PQPLALRSMLL	11	Unmodified	_PQPLALRSMLL_					0	0	0			REV__nc|ENSG00000095752|P20809-2|IL11	REV__nc|ENSG00000095752|P20809-2|IL11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8708373904228	2	619.868108	1237.72166	1.988	0.0012323	2.4521	0.00152	4.4401	0.0027523	619.8693389903442	77.066	1.4438	77.383	76.506	77.95	0.31653					106	45	3	0	0	0	1.0366	3	32129	32129;32178;32228		1.1933	0.12188	1	3462500	+		26149	8932	12868	12923	29998;29999;30000	29998					0.11231169001894159
PQPLALRSMLL	11	Unmodified	_PQPLALRSMLL_					0	0	0			REV__nc|ENSG00000095752|P20809-2|IL11	REV__nc|ENSG00000095752|P20809-2|IL11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8702270388603	2	619.868108	1237.72166	1.4221	0.00088151	2.9559	0.0018323	4.378	0.0027138	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	1.0174	1	32711	32711		2.7352	1.4057	1	7012900	+		26150	8932	12868	12923	30001	30001					0.11231169001894159
PQPRIWPL	8	Unmodified	_PQPRIWPL_					0	0	0			REV__ENSG00000162390|ENST00000343744|ACOT11	REV__ENSG00000162390|ENST00000343744|ACOT11	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2022888064384	3	336.199272	1005.57599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.581	1	59.907	59.407	60.407	0.32553								0	0	0	1.0178	1	24967	24967		0.45834	0.057624	1		+		26151	10640	12869	12924	30002	30002					0.07342074267990029
PQQRPSVV	8	Unmodified	_PQQRPSVV_					0	0	0		ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant;nc|ENSG00000189079|Q68CP9-3|ARID2;ENSG00000189079|ENST00000334344|ARID2	ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant	ARID2|p.S1616Rfs*20|1|0.08|ENSG00000189079|chr12:45860874-45860875|-/ACACAAATACTTAACCATTGTGTTACGGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.1753112673759	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.1	1	102.17	101.67	102.67	0.062805								0	0	0	1.0178	1	42753	42753		0.45834	0	1				26152	77	12870	12925	30003	30003					0.044843204745689036
PQRFLLWTL	9	Unmodified	_PQRFLLWTL_					0	0	0		ENST00000468960.2_1_7:98630555-98645380:+|nuORF	ENST00000468960.2_1_7:98630555-98645380:+|nuORF	ENST00000468960.2_1_7:98630555-98645380:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	587.3451415896416	2	587.342584	1172.67061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.475	1	91.841	91.341	92.341	1.366								0	0	0	0.42693	1	38107	38107		2.0598	0	1				26153	6722	12871	12926	30004	30004					0.09118588019327944
PQRQHREPHL	10	Unmodified	_PQRQHREPHL_					0	0	0		ENST00000553070.5_1_12:54694054-54694665:-|nuORF	ENST00000553070.5_1_12:54694054-54694665:-|nuORF	ENST00000553070.5_1_12:54694054-54694665:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2353393435478	3	433.233927	1296.67995	2.2864	0.00099055	0.51084	0.00022131	2.7972	0.0012119	433.23406205528755	40.981	6.4739	42.306	41.623	48.097	1.3254					333	206	4	0	0	0	0.846	1	18524	18524		3.8763	0.28366	1	9219400			26154	7277	12872	12927	30005	30005					0.043477493575664994
PQRRVGRWP	9	Unmodified	_PQRRVGRWP_					0	0	0		ENST00000519685.5_1_8:22863615-22864656:+|nuORF	ENST00000519685.5_1_8:22863615-22864656:+|nuORF	ENST00000519685.5_1_8:22863615-22864656:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1530334353447	3	384.556341	1150.64719	-0.19287	-7.4171E-05	-1.5471	-0.00059494	-1.74	-0.00066911	384.5558006245149	10.393	0.17848	11.138	11.043	11.221	0.74462					11	6	2	0	0	0	0.11941	1	4324	4324		0.23584	0	1	535350			26155	7071	12873	12928	30006	30006					0.07789587025376932
PQSLSVPWL	9	Unmodified	_PQSLSVPWL_					0	0	0			REV__ENST00000415030.6_1_11:118005707-118005986:-|nuORF	REV__ENST00000415030.6_1_11:118005707-118005986:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7855712771416	2	513.784567	1025.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.216	1	73.04	72.54	73.54	1.824								0	0	0	0.27791	1	29880	29880		20.454	1.1966	1		+		26156	12938	12874	12929	30007	30007					0.04282644448608153
PQTITTEETME	11	Unmodified	_PQTITTEETME_					0	0	0		nc|ENSG00000077254|Q8TEY7-3|USP33;ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33	nc|ENSG00000077254|Q8TEY7-3|USP33	nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.1949035525322	3	427.195592	1278.56495	1.2527	0.00053514	-1.5182	-0.00064858	-0.26553	-0.00011343	427.19464260352566	92.53	0.63696	92.53	92.164	92.801	0					35	20	2	0	0	0	1.0084	1	38677	38677		1.3296	0.21989	1	3413200			26157	958	12875	12930	30008	30008					-0.06319205469776534
PQTITTEETME	11	Unmodified	_PQTITTEETME_					0	0	0		nc|ENSG00000077254|Q8TEY7-3|USP33;ENSG00000077254|ENST00000370794|USP33;nc|ENSG00000077254|Q8TEY7|USP33	nc|ENSG00000077254|Q8TEY7-3|USP33	nc|ENSG00000077254|Q8TEY7-3|USP33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.1966735720634	3	427.195592	1278.56495	3.7348	0.0015955	-0.27205	-0.00011622	3.4628	0.0014793	427.1949194395876	90.726	0.76814	92.092	91.638	92.406	1.366					34	23	2	0	0	0	1.0084	1	38209	38209		1.3296	0	1	2472900			26158	958	12875	12930	30009	30009					-0.06319205469776534
PQTKEYIRK	9	Unmodified	_PQTKEYIRK_					0	0	0			REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|71|3|sense	REV__L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|71|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	581.8347656130791	2	581.83258	1161.65061	1.932	0.0011241	-0.53226	-0.00030969	1.3997	0.00081439	581.8316503782503	93.281	0.44363	93.281	93.044	93.488	0					16	13	2	0	0	0	0.85019	1	38946	38946		0.52476	0	1	792940	+		26159	14301	12876	12931	30010	30010					0.07624792288675053
PQTTHPDLYI	10	Unmodified	_PQTTHPDLYI_					0	0	0			REV__ENST00000475693.1_1_2:242607884-242611676:+|nuORF	REV__ENST00000475693.1_1_2:242607884-242611676:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	592.3102905154228	2	592.800946	1183.58734	1.466	0.00086907	-0.27839	-0.00016503	1.1877	0.00070404	592.799702258227	46.178	0.28284	48.148	48.064	48.347	1.9703					13	8	2	0	0	0	0.12551	1	19415	19415		2.7352	0.89096	1	765140	+		26160	10907	12877	12932	30011	30011					0.002888067808271444
PRAFAVILS	9	Unmodified	_PRAFAVILS_					0	0	0		tr|A0A553SJY3|A0A553SJY3_NIACISporulationintegralmembraneproteinYtvIOS=NialliacirculansOX=1397GN=ytvIPE=3SV=1	tr|A0A553SJY3|A0A553SJY3_NIACISporulationintegralmembraneproteinYtvIOS=NialliacirculansOX=1397GN=ytvIPE=3SV=1	tr|A0A553SJY3|A0A553SJY3_NIACISporulationintegralmembraneproteinYtvIOS=NialliacirculansOX=1397GN=ytvIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2008544802666	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.01	1	102.07	101.57	102.57	0.062805								0	0	0	0.42693	1	42712	42712		0.96228	0	1				26161	16264	12878	12933	30012	30012					0.08826654548136048
PRAFLKEI	8	Unmodified	_PRAFLKEI_					0	0	0		GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant;ENSG00000131386|ENST00000339732|GALNT15	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2000915408134	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.34	1	91.531	91.031	92.031	0.19042								0	0	0	1.0178	1	38261	38261		0.40072	0	1				26162	2488	12879	12934	30013	30013					0.08826654548136048
PRAFLKEI	8	Unmodified	_PRAFLKEI_					0	0	0		GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant;ENSG00000131386|ENST00000339732|GALNT15	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2008849978447	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.973	1	97.078	96.578	97.578	0.105								0	0	0	1.0178	1	40577	40577		1.4819	0.15237	1				26163	2488	12879	12934	30014	30014					0.08826654548136048
PRAFLKEI	8	Unmodified	_PRAFLKEI_					0	0	0		GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant;ENSG00000131386|ENST00000339732|GALNT15	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	GALNT15|p.I526Sfs*45|1|0.06|ENSG00000131386|chr3:16219961-16219961|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2014953494072	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.77	1	101.84	101.34	102.34	0.067009								0	0	0	1.0178	1	42609	42609		0.40072	0	1				26164	2488	12879	12934	30015	30015					0.08826654548136048
PRAHRATL	8	Unmodified	_PRAHRATL_					0	0	0		ENST00000500276.6_1_12:26111225-26111384:-|nuORF	ENST00000500276.6_1_12:26111225-26111384:-|nuORF	ENST00000500276.6_1_12:26111225-26111384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	461.2730590701103	2	461.272493	920.530432	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.12	104.62	105.62	0								0	0	0	1.0178	1	44544	44544		2.5775	0	1				26165	6975	12880	12935	30016	30016					0.06698848805615398
PRAMWLCP	8	Unmodified	_PRAMWLCP_					0	0	0		nc|ENSG00000122852|Q8IWL2-2|SFTPA1	nc|ENSG00000122852|Q8IWL2-2|SFTPA1	nc|ENSG00000122852|Q8IWL2-2|SFTPA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1639892458916	3	325.163064	972.467363	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.378	1	87.622	87.122	88.122	0.24387								0	0	0	1.0178	1	36637	36637		0.40072	0	1				26166	7862	12881	12936	30017	30017					-0.019971762983004737
PRARLGFAVF	10	Unmodified	_PRARLGFAVF_					0	0	0		ENST00000551380.5_3_19:58512080-58513903:-|nuORF;ENST00000550560.1_1_19:58512587-58513936:-|nuORF	ENST00000551380.5_3_19:58512080-58513903:-|nuORF	ENST00000551380.5_3_19:58512080-58513903:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3345214724541	2	567.33255	1132.65055	3.1203	0.0017702	0.25325	0.00014368	3.3735	0.0019139	567.3336099578056	74.867	0.52782	76.173	75.936	76.464	1.3063					37	16	3	0	0	0	0.87343	1	31482	31482		4.3292	0	1	1535400			26167	7264	12882	12937	30018	30018					0.08952837079368692
PRARRLTKE	9	Unmodified	_PRARRLTKE_					0	0	0		ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	ENSG00000128908|ENST00000648947|INO80	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2328979372978	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.406	1	82.687	82.187	83.187	0.2802								0	0	0	0.42693	1	34459	34459		0.86438	0.087843	1				26168	2388	12883	12938	30019	30019					0.11526436476970048
PRCFRRFRREQ	11	Unmodified	_PRCFRRFRREQ_					0	0	0		ENST00000326172.9_1_3:101574023-101574582:+|nuORF	ENST00000326172.9_1_3:101574023-101574582:+|nuORF	ENST00000326172.9_1_3:101574023-101574582:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1551.076464831829	1	1550.82334	1549.81607	1.7948	0.0027834	2.0097	0.0031166	3.8045	0.0059	1551.8293001380016	39.74	0.30719	39.74	39.576	39.883	0					19	9	3	0	0	0	0.97491	1	16677	16677		5.2969	3.9674	1	2901600			26169	5869	12884	12939	30020	30020					0.06315120596582346
PRCVVRVPVAR	11	Unmodified	_PRCVVRVPVAR_					0	0	0		nc|ENSG00000167680|Q9H3T3-3|SEMA6B;ENSG00000167680|ENST00000586582|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9217101931572	3	417.920403	1250.73938	1.4069	0.00058797	1.2044	0.00050332	2.6112	0.0010913	417.92082682335234	30.375	0.70564	30.661	30.501	31.206	0.2859					76	23	4	0	0	0	1.0131	2	12712	12712;12760		1.2148	0	1	6090000			26170	3985	12885	12940	30021;30022	30021					0.1240392904737746
PRCVVRVPVAR	11	Unmodified	_PRCVVRVPVAR_					0	0	0		nc|ENSG00000167680|Q9H3T3-3|SEMA6B;ENSG00000167680|ENST00000586582|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	nc|ENSG00000167680|Q9H3T3-3|SEMA6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6924621462822	4	313.692121	1250.73938	-0.34987	-0.00010975	1.482	0.00046489	1.1321	0.00035514	313.6925053445977	29.257	0.66803	30.54	30.312	30.98	1.2825					91	21	5	0	0	0	1.0174	1	12312	12312		1.1098	0	1	24092000			26171	3985	12885	12940	30023	30023					0.1240392904737746
PRDRLKLGK	9	Unmodified	_PRDRLKLGK_					0	0	0		ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.8453857302666	2	541.843282	1081.67201	3.285	0.00178	-0.95735	-0.00051874	2.3277	0.0012612	541.842907877179	107.55	0.1694	107.71	107.6	107.77	0.15795					28	8	4	0	0	0	0.83753	1	46208	46208		1.8442	0	1	177320000			26172	2357	12886	12941	30024	30024					0.1344422210806897
PREPYELGTSH	11	Unmodified	_PREPYELGTSH_					0	0	0			REV__ENSG00000125378|ENST00000245451|BMP4	REV__ENSG00000125378|ENST00000245451|BMP4	MSMS	GG20161007_CRH_Patient100_W632_01	3	643.3111450076103	2	643.312209	1284.60986	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.116	1	18.014	17.514	18.514	0.89794								0	0	0	0.63775	1	7124	7124		4.897	1.6157	1		+		26173	9665	12887	12942	30025	30025					-0.021055938215795322
PRESYAEK	8	Unmodified	_PRESYAEK_					0	0	0			REV__ENSG00000148734|ENST00000277942|NPFFR1	REV__ENSG00000148734|ENST00000277942|NPFFR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.2482177615166	2	490.245806	978.47706	0.50571	0.00024792	1.8128	0.00088872	2.3185	0.0011366	490.2469345307605	16.399	0.31724	16.399	16.277	16.594	0					13	9	2	0	0	0	0.88055	1	6825	6825		8.5933	0	1	524970	+		26174	10353	12888	12943	30026	30026					-0.013039934875791914
PRETVYGDIV	10	Unmodified	_PRETVYGDIV_					0	0	0			REV__tr|A0A553SHT3|A0A553SHT3_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13565PE=4SV=1	REV__tr|A0A553SHT3|A0A553SHT3_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13565PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	382.7841064333916	3	383.536389	1147.58734	0.63279	0.0002427	4.3772	0.0016788	5.01	0.0019215	383.5377547382437	56.656	0.20572	58.624	58.487	58.693	1.9684					10	6	2	0	0	0	0.12551	1	23744	23744		3.3196	0	1	608410	+		26175	14814	12889	12944	30027	30027					0.019448067808070846
PRETVYGDIV	10	Unmodified	_PRETVYGDIV_					0	0	0			REV__tr|A0A553SHT3|A0A553SHT3_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13565PE=4SV=1	REV__tr|A0A553SHT3|A0A553SHT3_NIACIABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13565PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	383.536389	1147.58734	0.33396	0.00012809	5.0261	0.0019277	5.3601	0.0020558	383.53835732570883	57.237	0.087265	58.652	58.58	58.667	1.4145	0.013933	0.00038677	NaN	3.3196	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	973300	+		26176	14814	12889	12944							0.019448067808070846
PRGKPMDS	8	Unmodified	_PRGKPMDS_					0	0	0			REV__nc|ENSG00000111325|Q6N063-2|OGFOD2	REV__nc|ENSG00000111325|Q6N063-2|OGFOD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	887.4404785037041	1	887.440363	886.433086	1.1556	0.0010256	-0.8977	-0.00079665	0.25794	0.00022891	887.4396648008433	107.48	0.1768	107.48	107.39	107.57	0					19	8	3	0	0	0	0.89051	1	46101	46101		2.3027	1.6124	1	17991000	+		26177	9322	12890	12945	30028	30028					-0.014673011855620643
PRGKPMDS	8	Unmodified	_PRGKPMDS_					0	0	0			REV__nc|ENSG00000111325|Q6N063-2|OGFOD2	REV__nc|ENSG00000111325|Q6N063-2|OGFOD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	887.440363	886.433086	1.1556	0.0010256	-0.8977	-0.00079665	0.25794	0.00022891	887.4396648008433	107.48	0.1768	107.48	107.39	107.57	0	-0.01565	0.00084245	NaN	2.3027	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17991000	+		26178	9322	12890	12945							-0.014673011855620643
PRGPALFVEG	10	Unmodified	_PRGPALFVEG_					0	0	0			REV__ENST00000371799.8_1_9:137968766-137969066:+|nuORF	REV__ENST00000371799.8_1_9:137968766-137969066:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.1915161013603	3	348.194186	1041.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.178	1	26.437	25.937	26.937	1.2594								0	0	0	0.65539	1	10541	10541		8.4443	0	1		+		26179	12675	12891	12946	30029	30029					0.04161162680156849
PRHIQRLRHSK	11	Unmodified	_PRHIQRLRHSK_					0	0	0			REV__ENST00000308086.2_1_12:72057128-72057308:+|nuORF	REV__ENST00000308086.2_1_12:72057128-72057308:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	714.4282714724541	2	714.426368	1426.83818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.17	103.67	104.67	0.16055								0	0	0	0.63775	1	43983	43983		1.1933	0	1		+		26180	12348	12892	12947	30030	30030					0.14183668336613664
PRIFPLLPSFI	11	Unmodified	_PRIFPLLPSFI_					0	0	0			REV__ENST00000379987.6_1_4:106890174-106890279:+|nuORF	REV__ENST00000379987.6_1_4:106890174-106890279:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3972656130791	2	650.394816	1298.77508	1.9699	0.0012812	0.76533	0.00049777	2.7352	0.001779	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0362	1	33918	33918		1.3295	0	1	10064000	+		26181	12750	12893	12948	30031	30031					0.13764289776031546
PRKGQRTALPA	11	Unmodified	_PRKGQRTALPA_					0	0	0			REV__ENSG00000125965|ENST00000374369|GDF5	REV__ENSG00000125965|ENST00000374369|GDF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8574706912041	2	597.856921	1193.69929	2.2016	0.0013163	-1.1327	-0.0006772	1.0689	0.00063905	597.8559694989469	75.998	0.74963	75.998	75.566	76.316	0					47	23	3	0	0	0	1.0357	1	31567	31567		1.4819	0.15237	1	1289900	+		26182	9686	12894	12949	30032	30032					0.11018705648439209
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5926086306572	3	422.591163	1264.75166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.399	1	43.399	42.899	43.899	0								0	0	0	0.66218	1	18169	18169		0.77653	0	1				26183	7402	12895	12950	30033	30033					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1951171755791	4	317.195191	1264.75166	0.74878	0.00023751	1.2065	0.00038269	1.9553	0.0006202	317.1954584195939	35.724	0.53128	36.026	35.734	36.265	0.30197					97	49	3	0	0	0	0.88031	1	14926	14926		3.5871	0	1	35490000			26184	7402	12895	12950	30034	30034					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1958801150322	4	317.195191	1264.75166	0.76771	0.00024351	1.1065	0.00035098	1.8742	0.00059449	317.4463394663959	36.076	0.39721	36.378	36.172	36.569	0.30197					83	35	4	0	0	0	0.88031	3	15173	15173;15211;15249		3.5871	0.95582	1	48084000			26185	7402	12895	12950	30035;30036;30037	30035					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1953918337822	4	317.195191	1264.75166	0.7908	0.00025084	1.75	0.0005551	2.5408	0.00080594	317.19560125039726	36.489	0.63893	36.79	36.544	37.183	0.30197					150	45	4	0	0	0	0.88031	2	15285	15285;15449		3.5871	0.26742	1	36396000			26186	7402	12895	12950	30038;30039	30038					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5922729372978	3	422.591163	1264.75166	1.7704	0.00074815	2.1761	0.00091959	3.9465	0.0016677	422.59194267234966	36.503	0.52721	36.805	36.518	37.045	0.30197					60	37	2	0	0	0	0.89422	1	15331	15331		2.086	0	1	4810300			26187	7402	12895	12950	30040	30040					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5936767458916	3	422.591163	1264.75166	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.694	1	43.015	42.515	43.515	0.32058								0	0	0	0.66218	1	17932	17932		0.77653	0	1				26188	7402	12895	12950	30041	30041					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1953307986259	4	317.195191	1264.75166	0.14392	4.5652E-05	1.9347	0.00061367	2.0786	0.00065932	317.1957169498615	33.838	0.32571	35.661	35.601	35.927	1.8227					93	37	3	0	0	0	0.8974	1	14192	14192		1.7423	0	1	51402000			26189	7402	12895	12950	30042	30042					0.12987288782096584
PRKKSRPFIH	10	Unmodified	_PRKKSRPFIH_					0	0	0		ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	ENST00000573672.1_1_16:3817649-3820675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1963073611259	4	317.195191	1264.75166	1.3799	0.00043768	2.7756	0.00088042	4.1555	0.0013181	317.195898574588	40.423	1.3769	42.286	41.584	42.961	1.8624					128	43	4	0	0	0	0.8974	1	16961	16961		1.7423	0	1	5336400			26190	7402	12895	12950	30043	30043					0.12987288782096584
PRKLQVKLRKM	11	Unmodified	_PRKLQVKLRKM_					0	0	0			REV__nc|ENSG00000140488|Q96J87-4|CELF6	REV__nc|ENSG00000140488|Q96J87-4|CELF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	349.9813720583916	4	349.978787	1395.88604	1.6496	0.00057733	2.997	0.0010489	4.6466	0.0016262	349.9795800234875	54.786	1.2595	55.106	54.789	56.049	0.32088					64	47	2	0	0	0	1.0388	1	23204	23204		0.50596	0.36606	1	5557000	+		26191	9040	12896	12951	30044	30044					0.20393606212451232
PRKPRLASSR	10	Unmodified	_PRKPRLASSR_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3575927615166	2	584.357088	1166.69962	1.8497	0.0010809	-0.65371	-0.000382	1.196	0.00069888	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	0.89803	1	30321	30321		1.4819	0.79152	1	3000400	+		26192	11037	12897	12952	30045	30045					0.122941253683166
PRKRGPGG	8	Unmodified	_PRKRGPGG_					0	0	0			REV__nc|ENSG00000197381|P78563-6|ADARB1	REV__nc|ENSG00000197381|P78563-6|ADARB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	824.4869872927666	1	824.484945	823.477669	1.7747	0.0014632	0.78336	0.00064587	2.5581	0.0021091	824.4853704102071	65.913	0.35	65.913	65.708	66.058	0					24	10	3	0	0	0	0.89178	1	27468	27468		0.69038	0	1	2394100	+		26193	11670	12898	12953	30046	30046					0.05886890742817741
PRKRRLRKLA	10	Unmodified	_PRKRRLRKLA_					0	0	0			REV__ENSG00000119986|ENST00000370626|AVPI1	REV__ENSG00000119986|ENST00000370626|AVPI1	MSMS	GG20161007_CRH_Patient100_A02_02	2	647.4421874880791	2	647.438747	1292.86294	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.49	1	108.54	108.04	109.04	0.050644								0	0	0	0.66264	1	46647	46647		0	0	1		+		26194	9563	12899	12954	30047	30047					0.22822348210024757
PRKWGGFS	8	Unmodified	_PRKWGGFS_					0	0	0		ENST00000325385.11_1_2:233201537-233201696:+|nuORF	ENST00000325385.11_1_2:233201537-233201696:+|nuORF	ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1689330935478	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.716	1	87.808	87.308	88.308	1.0918								0	0	0	1.0178	1	36556	36556		1.6526	0	1				26195	5867	12900	12955	30048	30048					0.012683551657232783
PRKWGGFS	8	Unmodified	_PRKWGGFS_					0	0	0		ENST00000325385.11_1_2:233201537-233201696:+|nuORF	ENST00000325385.11_1_2:233201537-233201696:+|nuORF	ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1687805056572	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.933	1	88.025	87.525	88.525	1.0918								0	0	0	1.0178	1	36660	36660		1.6526	0	1				26196	5867	12900	12955	30049	30049					0.012683551657232783
PRLKRGPK	8	Unmodified	_PRLKRGPK_					0	0	0			REV__nc|ENSG00000151725|Q71F23-3|CENPU	REV__nc|ENSG00000151725|Q71F23-3|CENPU	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.8785583376884	3	317.878533	950.613768	-0.24474	-7.7798E-05	2.8716	0.00091282	2.6268	0.00083502	317.87919358515984	17.318	0.43815	17.469	17.217	17.655	0.15093					26	16	2	0	0	0	0.89152	1	7171	7171		1.6526	0	1	1452600	+		26197	10405	12901	12956	30050	30050					0.13648585253463352
PRLKRGPK	8	Unmodified	_PRLKRGPK_					0	0	0			REV__nc|ENSG00000151725|Q71F23-3|CENPU	REV__nc|ENSG00000151725|Q71F23-3|CENPU	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	317.1975890994072	3	317.878533	950.613768	1.1042	0.00035101	1.1662	0.0003707	2.2704	0.00072171	317.87864138608614	42.362	0.12243	42.682	42.605	42.727	0.32058					5	3	2	0	0	0	2.3239	1	17784	17784		0.40072	0	1	1121900	+		26198	10405	12901	12956	30051	30051					0.13648585253463352
PRLKRGPK	8	Unmodified	_PRLKRGPK_					0	0	0			REV__nc|ENSG00000151725|Q71F23-3|CENPU	REV__nc|ENSG00000151725|Q71F23-3|CENPU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.8799011111259	3	317.878533	950.613768	-0.40613	-0.0001291	2.1518	0.00068401	1.7457	0.00055491	317.8792723075811	16.243	0.31455	17.282	17.091	17.405	1.0392					21	11	2	0	0	0	0.89152	1	6701	6701		1.6526	0	1	2218400	+		26199	10405	12901	12956	30052	30052					0.13648585253463352
PRLKRGPK	8	Unmodified	_PRLKRGPK_					0	0	0			REV__nc|ENSG00000151725|Q71F23-3|CENPU	REV__nc|ENSG00000151725|Q71F23-3|CENPU	MSMS	GG20161007_CRH_Patient100_W632_02	4	317.8809081912041	3	317.878533	950.613768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.102	1	27.819	27.319	28.319	1.7167								0	0	0	1.0178	1	10915	10915		1.6526	0	1		+		26200	10405	12901	12956	30053	30053					0.13648585253463352
PRLKRMPVRAV	11	Unmodified	_PRLKRMPVRAV_					0	0	0			REV__ENST00000382285.6_1_20:328123-329934:+|nuORF	REV__ENST00000382285.6_1_20:328123-329934:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	331.7061340212822	4	331.460496	1321.81288	1.4425	0.00047812	-1.3806	-0.0004576	0.0619	2.0518E-05	331.71051539049256	43.292	0.41642	45.235	44.952	45.368	1.9438					17	13	2	0	0	0	0.14606	1	18205	18205		2.4348	0	1	875540	+		26201	12783	12902	12957	30054	30054					0.1648447748984836
PRLLLQWR	8	Unmodified	_PRLLLQWR_					0	0	0			REV__ENST00000558870.1_1_15:77324662-77328157:+|nuORF	REV__ENST00000558870.1_1_15:77324662-77328157:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	361.2240478396416	3	361.225821	1080.65563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.822	1	99.822	99.322	100.32	0								0	0	0	1.0178	1	41786	41786		0.45834	0	1		+		26202	13886	12903	12958	30055	30055					0.11853140941957463
PRPKPRKK	8	Unmodified	_PRPKPRKK_					0	0	0			REV__ENST00000542676.5_1_12:22697068-22697125:-|nuORF	REV__ENST00000542676.5_1_12:22697068-22697125:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.2269775271416	3	336.225932	1005.65597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.254	1	32.536	32.036	33.036	1.2813								0	0	0	1.0178	1	13112	13112		0.40072	0	1		+		26203	13790	12904	12959	30056	30056					0.15336560661842213
PRPLLLKKS	9	Unmodified	_PRPLLLKKS_					0	0	0		nc|ENSG00000109686|Q5HYK7-3|SH3D19;nc|ENSG00000109686|Q5HYK7-2|SH3D19;nc|ENSG00000109686|Q5HYK7|SH3D19;ENSG00000109686|ENST00000604030|SH3D19	nc|ENSG00000109686|Q5HYK7-3|SH3D19	nc|ENSG00000109686|Q5HYK7-3|SH3D19	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2401611208916	3	351.237726	1050.69135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.251	1	96.356	95.856	96.856	0.105								0	0	0	0.42693	1	40279	40279		1.0715	0	1				26204	1673	12905	12960	30057	30057					0.168031783989818
PRPRRRAK	8	Unmodified	_PRPRRRAK_					0	0	0			REV__ENSG00000104237|ENST00000220676|RP1	REV__ENSG00000104237|ENST00000220676|RP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2226135134697	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.635	1	76.635	76.135	77.135	0								0	0	0	1.0178	1	31904	31904		0.40072	0	1		+		26205	9129	12906	12961	30058	30058					0.13621310607823034
PRPRWRRRLR	10	Unmodified	_PRPRWRRRLR_					0	0	0			REV__chr19:18153294-18160471|92|18.83|0.04|8.92|+|2|PIK3R2,PIK3R2|1	REV__chr19:18153294-18160471|92|18.83|0.04|8.92|+|2|PIK3R2,PIK3R2|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.7472411990166	3	483.635988	1447.88614	2.654	0.0012836	-2.4288	-0.0011746	0.22528	0.00010895	483.63433667712496	87.918	0.24045	87.918	87.847	88.088	0					13	7	2	0	0	0	0.1256	1	36728	36728		0.69767	0.53834	1	526250	+		26206	8286	12907	12962	30059	30059					0.18010787047342092
PRQQSRQHRRR	11	Unmodified	_PRQQSRQHRRR_					0	0	0			REV__ENST00000439096.2_1_19:47734314-47734437:-|nuORF	REV__ENST00000439096.2_1_19:47734314-47734437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.2864562869072	3	502.285795	1503.83556	2.272	0.0011412	-1.0092	-0.0005069	1.2628	0.00063428	502.28527701629656	45.382	0.74087	45.711	45.498	46.239	0.32899					54	24	4	0	0	0	1.0366	1	19053	19053		0.40827	0	1	3964700	+		26207	13072	12908	12963	30060	30060					0.10379212931661641
PRQRGKRRRRP	11	Unmodified	_PRQRGKRRRRP_					0	0	0			REV__ENST00000308664.10_1_12:110719006-110719138:+|nuORF	REV__ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	366.4817687869072	4	366.481717	1461.89776	1.0338	0.00037887	1.205	0.00044161	2.2388	0.00082048	366.48174824894005	32.032	0.71732	32.323	31.964	32.681	0.29086					57	22	3	0	0	0	1.0402	1	13530	13530		0.08335	0.08335	1	1096100	+		26208	12353	12909	12964	30061	30061					0.1852898407066732
PRQRPQLAAP	10	Unmodified	_PRQRPQLAAP_					0	0	0			REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	REV__ENST00000592274.1_1_19:3611803-3612905:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3302490115166	2	567.330539	1132.64652	1.5158	0.00085998	-1.4578	-0.00082707	0.058001	3.2906E-05	567.3294829828463	76.387	1.3345	76.387	76.011	77.346	0					93	42	3	0	0	0	0.89803	1	31851	31851		1.6526	0.17072	1	3735400	+		26209	14076	12910	12965	30062	30062					0.08550747585650242
PRRFFASYL	9	Unmodified	_PRRFFASYL_					0	0	0			REV__ENST00000469416.1_1_1:40922809-40928135:+|nuORF	REV__ENST00000469416.1_1_1:40922809-40928135:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.8174316287041	2	578.816733	1155.61891	2.0163	0.0011671	-0.87536	-0.00050667	1.1409	0.00066038	578.8159316761786	92.013	0.34497	92.013	91.819	92.164	0					17	10	2	0	0	0	0.66839	1	38412	38412		8.5933	3.8373	1	740970	+		26210	13267	12911	12966	30063	30063					0.047328443254400554
PRRKRRRRMKK	11	Unmodified	_PRRKRRRRMKK_					0	0	0			REV__ENST00000300811.7_1_19:44112133-44118443:-|nuORF	REV__ENST00000300811.7_1_19:44112133-44118443:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	784.5063354372978	2	784.504961	1566.99537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.68	1	104.85	104.35	105.35	0.1731								0	0	0	0.63775	1	44350	44350		0	0	1		+		26211	12312	12912	12967	30064	30064					0.2345504967515808
PRRQIWRRRRK	11	Unmodified	_PRRQIWRRRRK_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1806213259697	4	402.754005	1606.98691	0.53852	0.00021689	-2.9583	-0.0011915	-2.4198	-0.00097458	402.752836902482	47.979	0.53959	47.979	47.714	48.254	0					23	16	2	0	0	0	0.14606	1	19997	19997		0	0	1	1013900	+		26212	12172	12913	12968	30065	30065					0.20769819030169856
PRRQLLLIQRR	11	Unmodified	_PRRQLLLIQRR_					0	0	0			REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9872619509697	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.039	3	14014	14014;14051;14207		0.45452	0.35968	1	399160000	+		26213	13529	12914	12969	30066;30067;30068	30066					0.2151398506462101
PRRQLLLIQRR	11	Unmodified	_PRRQLLLIQRR_					0	0	0			REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9888793826103	4	362.987572	1447.92118	1.0375	0.00037658	-2.2419	-0.00081379	-1.2045	-0.00043721	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.039	3	13718	13551;13718;13896		0.45452	0.35968	1	559590000	+		26214	13529	12914	12969	30069;30070;30071	30070					0.2151398506462101
PRRQLLLIQRR	11	Unmodified	_PRRQLLLIQRR_					0	0	0			REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9878723025322	4	362.987572	1447.92118	-0.4714	-0.00017111	-1.3211	-0.00047955	-1.7925	-0.00065066	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.0369	3	13372	13256;13372;13408		1.1098	0.65524	1	563060000	+		26215	13529	12914	12969	30072;30073;30074	30073					0.2151398506462101
PRRQLLLIQRR	11	Unmodified	_PRRQLLLIQRR_					0	0	0			REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	REV__ENST00000504920.5_1_4:7065798-7065906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.6469299197197	3	483.647671	1447.92118	0.74599	0.0003608	-2.1779	-0.0010533	-1.4319	-0.00069254	483.64649418664004	31.202	0.40589	33.027	32.896	33.302	1.8246					36	13	4	0	0	0	1.039	1	13097	13097		0.45452	0.046251	1	14180000	+		26216	13529	12914	12969	30075	30075					0.2151398506462101
PRRQRRVGR	9	Unmodified	_PRRQRRVGR_					0	0	0		nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2466918826103	3	394.246389	1179.71734	2.6741	0.0010543	-0.15896	-6.2671E-05	2.5152	0.0009916	394.2462107237669	90.331	1.7877	90.541	90.017	91.805	0.20904					105	55	5	0	0	0	0.8462	1	37781	37781		1.0715	0.3738	1	33446000			26217	8008	12915	12970	30076	30076					0.13466885413845375
PRRRHKKRSLV	11	Unmodified	_PRRRHKKRSLV_					0	0	0			REV__HEXIM2|p.A87S|1|0.17|ENSG00000168517|chr17:45169207-45169207|G/T|missense_variant	REV__HEXIM2|p.A87S|1|0.17|ENSG00000168517|chr17:45169207-45169207|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.3221313357353	4	358.982556	1431.90112	-1.0946	-0.00039295	2.9077	0.0010438	1.8131	0.00065088	359.23438250086286	68.805	0.28181	68.805	68.673	68.955	0					11	8	2	0	0	0	0.14606	1	28686	28686		0	0	1	353750	+		26218	14220	12916	12971	30077	30077					0.2024423412467513
PRRRRTPRPQR	11	Unmodified	_PRRRRTPRPQR_					0	0	0		ENST00000242719.3_1_1:51702154-51702313:+|nuORF	ENST00000242719.3_1_1:51702154-51702313:+|nuORF	ENST00000242719.3_1_1:51702154-51702313:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	738.4491454958916	2	738.448166	1474.88178	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.492	1	82.772	82.272	83.272	0.2802								0	0	0	0.63775	1	34495	34495		0.30703	0	1				26219	5569	12917	12972	30078	30078					0.1633327783376899
PRRVRGRQR	9	Unmodified	_PRRVRGRQR_					0	0	0		LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant;ENST00000431543.6_1_6:112575248-112575670:-|nuORF	LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2475158572197	3	394.246389	1179.71734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.182	1	90.587	90.087	91.087	1.4045								0	0	0	0.42693	1	37574	37574		1.0715	0	1				26220	6504	12918	12973	30079	30079					0.13466885413845375
PRSFKKPFL	9	Unmodified	_PRSFKKPFL_					0	0	0		ENST00000548676.5_1_12:30893961-30894024:-|nuORF	ENST00000548676.5_1_12:30893961-30894024:-|nuORF	ENST00000548676.5_1_12:30893961-30894024:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.8945190310478	3	373.89396	1118.66005	0.22396	8.3739E-05	-0.095153	-3.5577E-05	0.12881	4.8162E-05	373.89386994013296	22.672	1.6424	24.323	24.016	25.659	1.6511					129	53	4	0	0	0	0.7849	1	9570	9570		2.2828	0.3764	1	9931600			26221	7250	12919	12974	30080	30080					0.10546605364902462
PRSLEVVLPD	10	Unmodified	_PRSLEVVLPD_					0	0	0			REV__nc|ENSG00000123552|Q70EL2-2|USP45	REV__nc|ENSG00000123552|Q70EL2-2|USP45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8159667849541	2	562.819138	1123.62372	2.0807	0.0011711	-1.1628	-0.00065444	0.91792	0.00051662	562.818111698192	71.984	0.5608	73.326	73.153	73.714	1.3415					39	17	3	0	0	0	0.74985	1	30258	30258		16.149	2.2431	1	4899100	+		26222	9622	12920	12975	30081	30081					0.06685683677528687
PRSLEVVLPD	10	Unmodified	_PRSLEVVLPD_					0	0	0			REV__nc|ENSG00000123552|Q70EL2-2|USP45	REV__nc|ENSG00000123552|Q70EL2-2|USP45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8176147341728	2	562.819138	1123.62372	1.9871	0.0011184	-2.1116	-0.0011885	-0.12451	-7.0077E-05	562.8173249679562	71.51	0.50361	73.334	73.191	73.694	1.824					31	15	3	0	0	0	0.74985	1	30006	30006		16.149	0.30192	1	4263900	+		26223	9622	12920	12975	30082	30082					0.06685683677528687
PRSRRHDRHH	10	Unmodified	_PRSRRHDRHH_					0	0	0		ENSG00000100888|ENST00000646647|CHD8;nc|ENSG00000100888|Q9HCK8-2|CHD8	ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9087097048759	3	451.908436	1352.70348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.187	1	15.084	14.584	15.584	0.89664								0	0	0	0.66254	1	5884	5884		0.15932	0	1				26224	1308	12921	12976	30083	30083					0.04123607914721106
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889037966728	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0173	1	6.0173	5.5173	6.5173	0								0	0	0	0.63775	1	2473	2473		0	0	1				26225	6270	12922	12977	30084	30084					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1262	1	6.1262	5.6262	6.6262	0								0	0	0	0.63775	1	2516	2516		0	0	1				26226	6270	12922	12977	30085	30085					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884460330009	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.248	1	6.248	5.748	6.748	0								0	0	0	0.63775	1	2566	2566		0	0	1				26227	6270	12922	12977	30086	30086					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882324099541	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3715	1	6.3715	5.8715	6.8715	0								0	0	0	0.63775	1	2616	2616		0	0	1				26228	6270	12922	12977	30087	30087					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.726	1	6.726	6.226	7.226	0								0	0	0	0.63775	1	2763	2763		0	0	1				26229	6270	12922	12977	30088	30088					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8279	1	6.8279	6.3279	7.3279	0								0	0	0	0.63775	1	2806	2806		0	0	1				26230	6270	12922	12977	30089	30089					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883849978447	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9097	1	7.9097	7.4097	8.4097	0								0	0	0	0.63775	1	3252	3252		0	0	1				26231	6270	12922	12977	30090	30090					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0377	1	8.0377	7.5377	8.5377	0								0	0	0	0.63775	1	3305	3305		0	0	1				26232	6270	12922	12977	30091	30091					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883239626884	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1161	1	9.1161	8.6161	9.6161	0								0	0	0	0.63775	1	3752	3752		0	0	1				26233	6270	12922	12977	30092	30092					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2272	1	9.2272	8.7272	9.7272	0								0	0	0	0.63775	1	3798	3798		0	0	1				26234	6270	12922	12977	30093	30093					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3202	1	9.3202	8.8202	9.8202	0								0	0	0	0.63775	1	3837	3837		0	0	1				26235	6270	12922	12977	30094	30094					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885681033134	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4302	1	9.4302	8.9302	9.9302	0								0	0	0	0.63775	1	3882	3882		0	0	1				26236	6270	12922	12977	30095	30095					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5488	1	9.5488	9.0488	10.049	0								0	0	0	0.63775	1	3931	3931		0	0	1				26237	6270	12922	12977	30096	30096					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883544802666	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6475	1	3.2817	2.7817	3.7817	0.63417								0	0	0	0.63775	1	1090	1090		0	0	1				26238	6270	12922	12977	30097	30097					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884460330009	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7522	1	3.3864	2.8864	3.8864	0.63417								0	0	0	0.63775	1	1133	1133		0	0	1				26239	6270	12922	12977	30098	30098					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.858	1	3.4922	2.9922	3.9922	0.63417								0	0	0	0.63775	1	1177	1177		0	0	1				26240	6270	12922	12977	30099	30099					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882629275322	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0723	1	3.7065	3.2065	4.2065	0.63417								0	0	0	0.63775	1	1268	1268		0	0	1				26241	6270	12922	12977	30100	30100					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1813	1	3.8049	3.3049	4.3049	0.62362								0	0	0	0.63775	1	1313	1313		0	0	1				26242	6270	12922	12977	30101	30101					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883849978447	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.323	1	3.9466	3.4466	4.4466	0.62362								0	0	0	0.63775	1	1372	1372		0	0	1				26243	6270	12922	12977	30102	30102					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9425	1	4.5661	4.0661	5.0661	0.62362								0	0	0	0.63775	1	1626	1626		0	0	1				26244	6270	12922	12977	30103	30103					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885681033134	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1679	1	4.7915	4.2915	5.2915	0.62362								0	0	0	0.63775	1	1720	1720		0	0	1				26245	6270	12922	12977	30104	30104					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.269	1	4.8926	4.3926	5.3926	0.62362								0	0	0	0.63775	1	1762	1762		0	0	1				26246	6270	12922	12977	30105	30105					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.083908	1	0.81969	0.31969	1.3197	0.73579								0	0	0	0.63775	1	34	34		0	0	1				26247	6270	12922	12977	30106	30106					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888427615166	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.51264	1	1.2484	0.74843	1.7484	0.73579								0	0	0	0.63775	1	211	211		0	0	1				26248	6270	12922	12977	30107	30107					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887206912041	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.6089	1	1.3447	0.84468	1.8447	0.73579								0	0	0	0.63775	1	251	251		0	0	1				26249	6270	12922	12977	30108	30108					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6672	1	2.4156	1.9156	2.9156	0.7484								0	0	0	0.63775	1	690	690		0	0	1				26250	6270	12922	12977	30109	30109					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9043	1	2.6527	2.1527	3.1527	0.7484								0	0	0	0.63775	1	789	789		0	0	1				26251	6270	12922	12977	30110	30110					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1045	1	2.8529	2.3529	3.3529	0.7484								0	0	0	0.63775	1	872	872		0	0	1				26252	6270	12922	12977	30111	30111					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2079	1	2.9563	2.4563	3.4563	0.7484								0	0	0	0.63775	1	916	916		0	0	1				26253	6270	12922	12977	30112	30112					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888122439384	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6634	1	3.4118	2.9118	3.9118	0.7484								0	0	0	0.63775	1	1105	1105		0	0	1				26254	6270	12922	12977	30113	30113					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3777	1	4.1229	3.6229	4.6229	0.74525								0	0	0	0.63775	1	1401	1401		0	0	1				26255	6270	12922	12977	30114	30114					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6078	1	4.3531	3.8531	4.8531	0.74525								0	0	0	0.63775	1	1496	1496		0	0	1				26256	6270	12922	12977	30115	30115					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7146	1	4.4598	3.9598	4.9598	0.74525								0	0	0	0.63775	1	1540	1540		0	0	1				26257	6270	12922	12977	30116	30116					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6717	1	5.4081	4.9081	5.9081	0.73642								0	0	0	0.63775	1	1937	1937		0	0	1				26258	6270	12922	12977	30117	30117					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7794	1	5.5158	5.0158	6.0158	0.73642								0	0	0	0.63775	1	1982	1982		0	0	1				26259	6270	12922	12977	30118	30118					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0927	1	5.8291	5.3291	6.3291	0.73642								0	0	0	0.63775	1	2114	2114		0	0	1				26260	6270	12922	12977	30119	30119					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2218	1	5.9582	5.4582	6.4582	0.73642								0	0	0	0.63775	1	2166	2166		0	0	1				26261	6270	12922	12977	30120	30120					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3219	1	6.0584	5.5584	6.5584	0.73642								0	0	0	0.63775	1	2208	2208		0	0	1				26262	6270	12922	12977	30121	30121					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4222	1	6.1586	5.6586	6.6586	0.73642								0	0	0	0.63775	1	2249	2249		0	0	1				26263	6270	12922	12977	30122	30122					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7532	1	6.484	5.984	6.984	0.73074								0	0	0	0.63775	1	2386	2386		0	0	1				26264	6270	12922	12977	30123	30123					0.010571113458581749
PRSSSLWIELC	11	Unmodified	_PRSSSLWIELC_					0	0	0		ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	ENST00000393437.7_2_2:100900079-100900241:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.38	1	7.1108	6.6108	7.6108	0.73074								0	0	0	0.63775	1	2647	2647		0	0	1				26265	6270	12922	12977	30124	30124					0.010571113458581749
PRVCSRHTE	9	Unmodified	_PRVCSRHTE_					0	0	0			REV__ENST00000538936.6_2_17:79862327-79862522:-|nuORF	REV__ENST00000538936.6_2_17:79862327-79862522:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.7701293826103	2	542.769457	1083.52436	2.1316	0.001157	0.35677	0.00019365	2.4884	0.0013506	542.7693318092133	83.98	0.4305	83.98	83.721	84.151	0					26	13	2	0	0	0	0.80869	1	34975	34975		2.9952	0.69251	1	10518000	+		26266	13769	12923	12978	30125	30125					-0.01406037488209222
PRWLRWPRWVA	11	Unmodified	_PRWLRWPRWVA_					0	0	0		ENST00000370406.7_1_X:149106490-149106673:-|nuORF	ENST00000370406.7_1_X:149106490-149106673:-|nuORF	ENST00000370406.7_1_X:149106490-149106673:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	762.4331542849541	2	761.930754	1521.84696	1.7664	0.0013459	0.55522	0.00042304	2.3216	0.0017689	762.431808126249	42.621	0.18795	42.941	42.818	43.006	0.32058					9	5	2	0	0	0	1.0405	1	17895	17895		0	0	1	344940			26267	6115	12924	12979	30126	30126					0.1069064197311036
PRWLRWPRWVA	11	Unmodified	_PRWLRWPRWVA_					0	0	0		ENST00000370406.7_1_X:149106490-149106673:-|nuORF	ENST00000370406.7_1_X:149106490-149106673:-|nuORF	ENST00000370406.7_1_X:149106490-149106673:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	761.930754	1521.84696	1.9164	0.0014602	-0.42074	-0.00032057	1.4957	0.0011396	761.930792154697	43.182	0.21488	43.182	43.057	43.272	0	0.1203	-0.00087857	NaN	0	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	400740			26268	6115	12924	12979							0.1069064197311036
PRWRWRWRWWW	11	Unmodified	_PRWRWRWRWWW_					0	0	0			REV__chr16:31184396-31188325|141|15.18|0.05|8.15|+|1|FUS,FUS|1	REV__chr16:31184396-31188325|141|15.18|0.05|8.15|+|1|FUS,FUS|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	928.9750244021416	2	928.979102	1855.94365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.112	1	98.202	97.702	98.702	0.090881								0	0	0	0.63775	1	41052	41052		0.30703	0.30703	1		+		26269	8266	12925	12980	30127	30127					0.049916292528905615
PRYIKWTQREK	11	Unmodified	_PRYIKWTQREK_					0	0	0		nc|ENSG00000109381|Q15723-4|ELF2;nc|ENSG00000109381|Q15723-2|ELF2;nc|ENSG00000109381|Q15723-3|ELF2;nc|ENSG00000109381|Q15723-1|ELF2;ENSG00000109381|ENST00000686138|ELF2	nc|ENSG00000109381|Q15723-4|ELF2	nc|ENSG00000109381|Q15723-4|ELF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2865478396416	3	502.284287	1503.83103	1.9383	0.00097359	2.7454	0.001379	4.6837	0.0023526	502.2855731697603	46.942	0.5845	46.942	46.725	47.309	0					39	18	3	0	0	0	0.98765	1	19623	19623		2.084	1.6757	1	2407600			26270	1664	12926	12981	30128	30128					0.09926890945507694
PSALALSLLL	10	Unmodified	_PSALALSLLL_					0	0	0		ENST00000565325.5_1_15:73854253-73925580:-|nuORF;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN;ENSG00000156642|ENST00000345330|NPTN;ENST00000563753.1_1_15:73884305-73925556:-|nuORF;nc|ENSG00000156642|Q9Y639-4|NPTN	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3202392458916	2	499.318243	996.621933	4.1339	0.0020641	-0.58701	-0.0002931	3.5469	0.001771	499.31755339646384	91.167	0.31467	92.149	92.006	92.321	0.98157					15	9	2	0	0	0	0.11481	1	38398	38398		61.357	21.4	1	725710			26271	3453	12927	12982	30129	30129					0.12348674659574499
PSALALSLLL	10	Unmodified	_PSALALSLLL_					0	0	0		ENST00000565325.5_1_15:73854253-73925580:-|nuORF;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN;ENSG00000156642|ENST00000345330|NPTN;ENST00000563753.1_1_15:73884305-73925556:-|nuORF;nc|ENSG00000156642|Q9Y639-4|NPTN	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3195983767509	2	499.318243	996.621933	3.5567	0.0017759	0.021418	1.0694E-05	3.5781	0.0017866	499.31835678151407	90.743	0.31941	92.108	91.929	92.249	1.366					18	9	3	0	0	0	0.11481	1	38220	38220		61.357	21.4	1	1127900			26272	3453	12927	12982	30130	30130					0.12348674659574499
PSCCCCCCGH	10	Unmodified	_PSCCCCCCGH_					0	0	0		ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	339.0832092165947	3	339.084223	1014.23084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.972	1	26.231	25.731	26.731	1.2594								0	0	0	0.66264	1	10451	10451		0	0	1				26273	6844	12928	12983	30131	30131					-0.2757067851244983
PSCCCCCCGH	10	Unmodified	_PSCCCCCCGH_					0	0	0		ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	339.0859863162041	3	339.084223	1014.23084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.375	1	21.95	21.45	22.45	1.5748								0	0	0	0.66264	1	8475	8475		0	0	1				26274	6844	12928	12983	30132	30132					-0.2757067851244983
PSCCCCCCGH	10	Unmodified	_PSCCCCCCGH_					0	0	0		ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	ENST00000483722.1_1_6:41166134-41168799:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	339.0844604372978	3	339.084223	1014.23084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.828	1	26.513	26.013	27.013	1.6845								0	0	0	0.66264	1	10375	10375		0	0	1				26275	6844	12928	12983	30133	30133					-0.2757067851244983
PSDCSSDR	8	Unmodified	_PSDCSSDR_					0	0	0			REV__ENST00000338488.8_1_9:102584509-102584662:+|nuORF	REV__ENST00000338488.8_1_9:102584509-102584662:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	866.3261596560478	1	866.330872	865.323595	0.62758	0.00054369	0.15847	0.00013729	0.78605	0.00068098	866.3276005465983	20.032	0.15875	20.23	20.143	20.302	0.19775					7	4	2	0	0	0	0.8909	1	8332	8332		2.0598	0	1	330960	+		26276	12481	12929	12984	30134	30134					-0.11445351595546072
PSDDYDDTDDD	11	Unmodified	_PSDDYDDTDDD_					0	0	0		ENST00000476863.1_1_19:54946248-54947306:+|nuORF;nc|ENSG00000167614|Q9H313-4|TTYH1;ENST00000489425.5_1_19:54937741-54947306:+|nuORF;ENSG00000167614|ENST00000376530|TTYH1;nc|ENSG00000167614|Q9H313-2|TTYH1;ENST00000487134.5_1_19:54927741-54947306:+|nuORF	ENST00000476863.1_1_19:54946248-54947306:+|nuORF	ENST00000476863.1_1_19:54946248-54947306:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	318.2278930544853	4	318.856018	1271.39497	-2.9533	-0.00094167	-0.04206	-1.3411E-05	-2.9953	-0.00095508	318.8567219422928	23.942	0.40096	23.942	23.81	24.211	0					18	12	2	0	0	0	0.14606	1	10070	10070		0	0	1	252640			26277	3980	12930	12985	30135	30135					-0.22987649938522736
PSEKSLVKLHK	11	Unmodified	_PSEKSLVKLHK_					0	0	0		ENSG00000164187|ENST00000296603|LMBRD2	ENSG00000164187|ENST00000296603|LMBRD2	ENSG00000164187|ENST00000296603|LMBRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1956054568291	4	317.194857	1264.75032	0.13675	4.3377E-05	2.818	0.00089386	2.9548	0.00093723	317.19563218135227	34.331	0.42652	36.153	35.864	36.291	1.8227					89	43	3	0	0	0	0.98969	1	14344	14344		4.4062	0.56024	1	38415000			26278	3757	12931	12986	30136	30136					0.12853609902640528
PSEVSLLMI	9	Unmodified	_PSEVSLLMI_					0	0	0		tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7720519900322	2	494.772811	987.531069	2.721	0.0013463	2.1968	0.0010869	4.9178	0.0024332	494.7743507754542	72.404	0.50142	74.214	74.011	74.512	1.8101					25	15	2	0	0	0	0.15478	1	30351	30351		38.151	6.0342	1	1039100			26279	16888	12932	12987	30137	30137					0.0368046261978634
PSEVSLLMI	9	Unmodified	_PSEVSLLMI_					0	0	0		tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	494.772811	987.531069	3.465	0.0017144	-0.048239	-2.3867E-05	3.4167	0.0016905	494.7732154592806	72.85	0.62672	74.179	73.943	74.569	1.3297	-0.017236	-0.0007131	NaN	38.151	39	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1621900			26280	16888	12932	12987							0.0368046261978634
PSFAIDATSFS	11	Unmodified	_PSFAIDATSFS_					0	0	0			REV__PIK3R6|p.V667Afs*?|1|0.11|ENSG00000276231|chr17:8804149-8804150|-/TCTGGGGAAAATGCAATATCAG|frameshift_variant	REV__PIK3R6|p.V667Afs*?|1|0.11|ENSG00000276231|chr17:8804149-8804150|-/TCTGGGGAAAATGCAATATCAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.7719604372978	2	571.771854	1141.52915	4.1588	0.0023779	-3.5211	-0.0020132	0.63779	0.00036467	571.7696277490937	91.794	0.43069	92.73	92.588	93.019	0.93624					32	13	3	0	0	0	0.74096	1	38722	38722		17.113	1.2657	1	1148400	+		26281	14599	12933	12988	30138	30138					-0.035948748644841544
PSFLLPSK	8	Unmodified	_PSFLLPSK_					0	0	0		ENST00000535106.5_1_1:150039487-150039628:+|nuORF	ENST00000535106.5_1_1:150039487-150039628:+|nuORF	ENST00000535106.5_1_1:150039487-150039628:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1206848025322	2	444.763104	887.511654	1.4536	0.00064653	1.238	0.00055064	2.6917	0.0011972	444.76315175684425	26.039	0.68773	27.299	27.109	27.797	1.2594					38	21	3	0	0	0	2.3239	1	10953	10953		4.756	0	1	1192400			26282	7193	12934	12989	30139	30139					0.0633987439118755
PSFLLRHL	8	Unmodified	_PSFLLRHL_					0	0	0		ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	ENST00000216489.7_1_14:78139965-78140151:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1995422244072	3	328.199272	981.575986	0.27459	9.0119E-05	0.25679	8.4279E-05	0.53138	0.0001744	328.1993172249382	31.551	0.7445	33.375	33.103	33.848	1.8246					84	27	5	0	0	0	0.88587	1	13227	13227		3.5965	0	1	106150000			26283	5521	12935	12990	30140	30140					0.08446074267999393
PSGGGPHF	8	Unmodified	_PSGGGPHF_					0	0	0			REV__nc|ENSG00000175879|P13378-2|HOXD8	REV__nc|ENSG00000175879|P13378-2|HOXD8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	378.4481078982353	2	378.177195	754.339838	-1.6978	-0.00064208	1.4081	0.0005325	-0.28976	-0.00010958	378.17775128944766	11.89	0.61416	11.89	11.513	12.127	0					25	19	2	0	0	0	2.3239	1	4963	4963		14.582	4.3983	1	352250	+		26284	11163	12936	12991	30141	30141					-0.047158575764797206
PSGLALFLM	9	Unmodified	_PSGLALFLM_					0	0	0			REV__nc|ENSG00000175606|Q9BUB7-3|TMEM70	REV__nc|ENSG00000175606|Q9BUB7-3|TMEM70	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	948.5292236208916	1	948.522301	947.515025	2.4095	0.0022855	1.4638	0.0013884	3.8733	0.0036739	948.5239054452346	84.966	0.44784	84.966	84.716	85.164	0					20	13	2	0	0	0	0.24063	1	35412	35412		28.487	5.3384	1	682230	+		26285	11158	12937	12992	30142	30142					0.03916801173534168
PSGPVLGPALV	11	Unmodified	_PSGPVLGPALV_					0	0	0		ENST00000441302.6_1_3:39139474-39139633:-|nuORF	ENST00000441302.6_1_3:39139474-39139633:-|nuORF	ENST00000441302.6_1_3:39139474-39139633:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.2017394900322	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.942	1	32.942	32.442	33.442	0								0	0	0	0.63775	1	13800	13800		0.50596	0.10524	1				26286	6555	12938	12993	30143	30143					0.08331217482714237
PSHPTAHK	8	Unmodified	_PSHPTAHK_					0	0	0			REV__IRF6|p.R45P|1|0.17|ENSG00000117595|chr1:209801280-209801280|C/G|missense_variant	REV__IRF6|p.R45P|1|0.17|ENSG00000117595|chr1:209801280-209801280|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.7291137576103	2	437.730126	873.4457	0.79176	0.00034658	-0.81245	-0.00035563	-0.020693	-9.0579E-06	437.7292176131497	15.858	0.49609	15.988	15.776	16.272	0.13022					22	15	2	0	0	0	0.84871	1	6598	6598		16.942	1.0951	1	530100	+		26287	14236	12939	12994	30144	30144					0.003914782690003449
PSHRCPEKERK	11	Unmodified	_PSHRCPEKERK_					0	0	0		ENST00000591814.5_1_18:77227692-77227848:+|nuORF	ENST00000591814.5_1_18:77227692-77227848:+|nuORF	ENST00000591814.5_1_18:77227692-77227848:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	456.8435241580009	3	456.23846	1365.69355	0.72797	0.00033213	2.8825	0.0013151	3.6104	0.0016472	456.2392093601165	9.9144	0.18452	9.9923	9.8845	10.069	0.077971					9	5	2	0	0	0	0.14606	1	4087	4087		4.7159	1.1289	1	167210			26288	7492	12940	12995	30145	30145					0.025332390744551958
PSLLLLLLLA	10	Unmodified	_PSLLLLLLLA_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0692932009697	3	355.914249	1064.72092	0.054949	1.9557E-05	2.5131	0.00089444	2.568	0.000914	355.915022869697	21.275	0.53982	22.849	22.712	23.252	1.5748					37	17	4	0	0	0	0.12561	1	8889	8889		0	0	1	2239000	+		26289	10824	12941	12996	30146	30146					0.19114697624490873
PSLLLLLLLG	10	Unmodified	_PSLLLLLLLG_					0	0	0		nc|ENSG00000153246|Q13018-2|PLA2R1;ENSG00000153246|ENST00000283243|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	nc|ENSG00000153246|Q13018-2|PLA2R1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2441894412041	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89588	1	7507	7507		1.9064	0	1	364430000			26290	3352	12942	12997	30147	30147					0.18194411107424457
PSPAPHGR	8	Unmodified	_PSPAPHGR_					0	0	0			REV__ENST00000535903.1_1_12:10163358-10165517:+|nuORF	REV__ENST00000535903.1_1_12:10163358-10165517:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	409.9221374392509	2	409.717019	817.419485	0.33831	0.00013861	-0.98854	-0.00040502	-0.65023	-0.00026641	409.7166434838217	12.154	0.38085	12.243	12.021	12.402	0.089381					16	11	2	0	0	0	2.3239	1	4955	4955		13.508	0	1	248600	+		26291	8361	12943	12998	30148	30148					0.003472090975151332
PSPGFLFH	8	Unmodified	_PSPGFLFH_					0	0	0		nc|ENSG00000085276|Q03112-8|MECOM;nc|ENSG00000085276|Q03112-5|MECOM;nc|ENSG00000085276|Q03112-6|MECOM;nc|ENSG00000085276|Q03112-1|MECOM;nc|ENSG00000085276|Q03112-4|MECOM;nc|ENSG00000085276|Q03112|MECOM;ENSG00000085276|ENST00000651503|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	nc|ENSG00000085276|Q03112-8|MECOM	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2341796755791	2	451.231971	900.449388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.73	1	101.9	101.4	102.4	0.17032								0	0	0	1.0178	1	42802	42802		0.79363	0	1				26292	1060	12944	12999	30149	30149					-0.0048185195714722795
PSPTTGTYR	9	Unmodified	_PSPTTGTYR_					0	0	0			REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	490.2464172244072	2	490.245806	978.47706	0.7121	0.0003491	0.72697	0.0003564	1.4391	0.0007055	490.24617110773465	21.085	0.68207	21.085	20.787	21.469	0					61	21	4	0	0	0	0.073578	2	8742	8742;8781		58.679	8.7458	1	10644000	+		26293	10178	12945	13000	30150;30151	30150					-0.013039934875678227
PSPTTGTYR	9	Unmodified	_PSPTTGTYR_					0	0	0			REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	490.245806	978.47706	0.7121	0.0003491	0.72697	0.0003564	1.4391	0.0007055	490.24617110773465	21.085	0.68207	21.085	20.787	21.469	0	-0.057066	0.00012664	NaN	58.679	61	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10644000	+		26294	10178	12945	13000							-0.013039934875678227
PSPTTGTYR	9	Unmodified	_PSPTTGTYR_					0	0	0			REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	REV__ENST00000592516.1_1_19:11031365-11031741:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	490.245806	978.47706	0.88081	0.00043181	1.406	0.00068927	2.2868	0.0011211	490.24670690988074	20.126	0.51726	21.252	20.956	21.473	1.1254	0.10941	0.00079238	NaN	58.679	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1110700	+		26295	10178	12945	13000							-0.013039934875678227
PSRFMFLLF	9	Unmodified	_PSRFMFLLF_					0	0	0		ENSG00000139055|ENST00000266397|ERP27	ENSG00000139055|ENST00000266397|ERP27	ENSG00000139055|ENST00000266397|ERP27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.3157226443291	2	579.312438	1156.61032	3.5787	0.0020732	1.5361	0.00088987	5.1148	0.0029631	579.3134073248756	97.501	0.13791	97.785	97.72	97.858	0.28442					9	4	3	0	0	0	0.13873	1	41020	41020		39.957	3.9131	1	23846000			26296	2862	12946	13001	30152	30152					0.0382815436457804
PSRGRKRPGRV	11	Unmodified	_PSRGRKRPGRV_					0	0	0		ENST00000568710.1_1_16:67585-84971:-|nuORF	ENST00000568710.1_1_16:67585-84971:-|nuORF	ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1958190798759	4	317.196994	1264.75887	-2.4472	-0.00077625	-1.1123	-0.00035283	-3.5595	-0.0011291	317.19654149507863	36.285	0.88987	36.285	36.142	37.032	0					123	64	3	0	0	0	1.0254	1	15293	15293		2.2527	0.66045	1	37022000			26297	7375	12947	13002	30153	30153					0.13708021382490188
PSRLLNRY	8	Unmodified	_PSRLLNRY_					0	0	0			REV__ENSG00000188505|ENST00000339852|NCCRP1	REV__ENSG00000188505|ENST00000339852|NCCRP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1962463259697	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.092	1	41.092	40.592	41.592	0								0	0	0	1.0178	1	17210	17210		1.1933	0	1		+		26298	11570	12948	13003	30154	30154					0.06387984774266897
PSRLLNRY	8	Unmodified	_PSRLLNRY_					0	0	0			REV__ENSG00000188505|ENST00000339852|NCCRP1	REV__ENSG00000188505|ENST00000339852|NCCRP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1964904665947	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.675	1	34.975	34.475	35.475	0.29942								0	0	0	1.0178	1	14565	14565		1.1933	0	1		+		26299	11570	12948	13003	30155	30155					0.06387984774266897
PSRLLSVYS	9	Unmodified	_PSRLLSVYS_					0	0	0		ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1961852908134	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.979	1	91.188	90.688	91.688	0.20904								0	0	0	0.42693	1	38116	38116		2.086	1.1237	1				26300	5797	12949	13004	30156	30156					0.05093742960286818
PSRLLSVYS	9	Unmodified	_PSRLLSVYS_					0	0	0		ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1956054568291	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.162	1	93.331	92.831	93.831	0.16835								0	0	0	0.42693	1	39005	39005		2.086	0.75648	1				26301	5797	12949	13004	30157	30157					0.05093742960286818
PSRLLSVYS	9	Unmodified	_PSRLLSVYS_					0	0	0		ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	ENST00000310418.8_1_5:175819519-175819774:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.1951476931572	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.131	1	92.112	91.612	92.612	0.98157								0	0	0	0.42693	1	38384	38384		0.77653	0.31819	1				26302	5797	12949	13004	30158	30158					0.05093742960286818
PSRPGAPSSR	10	Unmodified	_PSRPGAPSSR_					0	0	0			REV__ENST00000564529.1_1_15:75165550-75165682:-|nuORF	REV__ENST00000564529.1_1_15:75165550-75165682:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2725097537041	2	506.270147	1010.52574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.1	1	26.36	25.86	26.86	1.2594								0	0	0	0.64675	1	10507	10507		17.113	3.605	1		+		26303	13923	12950	13005	30159	30159					0.02089919872196333
PSRPGLRTRK	10	Unmodified	_PSRPGLRTRK_					0	0	0			REV__ENSG00000177352|ENST00000321895|CCDC71	REV__ENSG00000177352|ENST00000321895|CCDC71	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3574096560478	2	584.357088	1166.69962	3.3962	0.0019846	-1.7459	-0.0010202	1.6503	0.00096435	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.89803	1	31313	31313		1.1933	0	1	5910500	+		26304	11213	12951	13006	30160	30160					0.12294125368293862
PSRRLLPLLLL	11	Unmodified	_PSRRLLPLLLL_					0	0	0		nc|ENSG00000106868|Q6UWL2-3|SUSD1;ENSG00000106868|ENST00000374270|SUSD1;nc|ENSG00000106868|Q6UWL2-2|SUSD1	nc|ENSG00000106868|Q6UWL2-3|SUSD1	nc|ENSG00000106868|Q6UWL2-3|SUSD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	430.8889343142509	3	430.958852	1289.85473	1.3266	0.00057173	4.0238	0.0017341	5.3504	0.0023058	430.9604719015364	26.934	0.3098	27.196	26.956	27.266	0.26173					11	9	2	0	0	0	0.14606	1	11277	11277		0.094841	0	1	289140			26305	1588	12952	13007	30161	30161					0.22139356450043124
PSRRSKLRKPK	11	Unmodified	_PSRRSKLRKPK_					0	0	0		ENST00000425494.1_1_10:37812205-37812634:+|nuORF;ENST00000522955.5_1_8:38663104-38684943:+|nuORF;nc|ENSG00000147526|O75410-3|TACC1;nc|ENSG00000147526|O75410-7|TACC1;nc|ENSG00000147526|O75410-9|TACC1;ENSG00000147526|ENST00000317827|TACC1;nc|ENSG00000147526|O75410-2|TACC1	ENST00000425494.1_1_10:37812205-37812634:+|nuORF	ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	339.2211181521416	4	338.970385	1351.85244	-0.58807	-0.00019934	-0.42419	-0.00014379	-1.0123	-0.00034313	338.97054425648236	31.706	0.77863	32.987	32.501	33.28	1.2813					71	25	5	0	0	0	1.0388	1	13208	13208		0.50596	0	1	7235700			26306	3183	12953	13008	30162	30162					0.19058320764929704
PSRSRRRGCSE	11	Unmodified	_PSRSRRRGCSE_					0	0	0		ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8875610232353	3	430.88631	1289.6371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.39	1	110.55	110.05	111.05	0.15228								0	0	0	0.63775	1	47872	47872		0	0	1				26307	7512	12954	13009	30163	30163					0.0038661123785459495
PSRSRRRGCSE	11	Unmodified	_PSRSRRRGCSE_					0	0	0		ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	ENST00000594962.5_1_19:17608063-17615347:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877441287041	3	430.88631	1289.6371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.94	110.44	111.44	0.15228								0	0	0	0.63775	1	48032	48032		0	0	1				26308	7512	12954	13009	30164	30164					0.0038661123785459495
PSSHLRPDCSK	11	Unmodified	_PSSHLRPDCSK_					0	0	0		nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.8048583865166	2	613.800954	1225.58736	1.0765	0.00066074	4.371	0.0026829	5.4474	0.0033436	613.8037590963271	18.314	0.22068	18.314	18.21	18.431	0					14	8	2	0	0	0	0.76	1	7611	7611		16.566	2.1605	1	1153600			26309	7818	12955	13010	30165	30165					-0.016415164908494262
PSSHLRPDCSK	11	Unmodified	_PSSHLRPDCSK_					0	0	0		nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	613.800954	1225.58736	0.36832	0.00022608	4.2678	0.0026196	4.6361	0.0028456	613.8035911375089	17.918	0.18688	18.091	17.984	18.17	0.17285	-0.054065	-0.00049903	NaN	16.566	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	291200			26310	7818	12955	13010							-0.016415164908494262
PSSHLRPDCSK	11	Unmodified	_PSSHLRPDCSK_					0	0	0		nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	nc|ENSG00000038274|Q9NZL9-4|MAT2B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	613.800954	1225.58736	0.27265	0.00016736	6.9816	0.0042853	7.2543	0.0044527	613.8043544313632	17.132	0.17812	18.03	17.905	18.083	0.89794	-0.1148	0.0028325	NaN	16.566	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254410			26311	7818	12955	13010							-0.016415164908494262
PSSSDPWTGR	10	Unmodified	_PSSSDPWTGR_					0	0	0		ENSG00000110395|ENST00000264033|CBL	ENSG00000110395|ENST00000264033|CBL	ENSG00000110395|ENST00000264033|CBL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2530700564384	3	363.836839	1088.48869	-2.0532	-0.00074702	-0.39168	-0.00014251	-2.4449	-0.00088953	363.83539616220406	13.224	0.83409	13.224	12.622	13.456	0					35	26	2	0	0	0	0.1249	1	5299	5299		12.873	3.8964	1	784700			26312	1704	12956	13011	30166	30166					-0.05201796464234576
PSTMLLLLKIH	11	Unmodified	_PSTMLLLLKIH_					0	0	0			REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1972228884697	4	317.196705	1264.75771	-2.1736	-0.00068946	2.7274	0.00086512	0.55379	0.00017566	317.19748137113305	43.264	1.396	43.264	42.509	43.905	0					123	44	4	0	0	0	1.0362	1	18127	18127		1.3296	0.11481	1	4009700	+		26313	12563	12957	13012	30167	30167					0.13592626178729006
PSTMLLLLKIH	11	Unmodified	_PSTMLLLLKIH_					0	0	0			REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.4476196169853	4	317.196705	1264.75771	1.0997	0.00034881	-0.57943	-0.00018379	0.52025	0.00016502	317.19645935195933	42.685	1.6146	43.006	42.374	43.988	0.32058					109	52	3	0	0	0	1.0362	2	17951	17951;18005		1.3296	0.11481	1	3644000	+		26314	12563	12957	13012	30168;30169	30168					0.13592626178729006
PSTMLLLLKIH	11	Unmodified	_PSTMLLLLKIH_					0	0	0			REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	REV__ENST00000357430.7_1_2:223806358-223806715:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1964599490166	4	317.196705	1264.75771	1.0711	0.00033975	-1.055	-0.00033464	0.016116	5.1119E-06	317.1961583985246	40.829	1.8044	42.154	41.038	42.843	1.3254					142	57	4	0	0	0	1.0362	1	17266	17266		1.3296	0.21989	1	3140200	+		26315	12563	12957	13012	30170	30170					0.13592626178729006
PSVALFVH	8	Unmodified	_PSVALFVH_					0	0	0			REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2491027712822	2	435.247621	868.480688	2.5698	0.0011185	1.2966	0.00056434	3.8664	0.0016829	435.2482550229941	44.282	0.41789	45.643	45.478	45.896	1.3613					22	12	2	0	0	0	0.88958	1	18577	18577		2.8892	0.31174	1	1078700	+		26316	15130	12958	13013	30171	30171					0.04118721076940801
PSVALFVH	8	Unmodified	_PSVALFVH_					0	0	0			REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	435.247621	868.480688	2.5698	0.0011185	1.2966	0.00056434	3.8664	0.0016829	435.2482550229941	44.282	0.41789	45.643	45.478	45.896	1.3613	0.037036	0.00035875	NaN	2.8892	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1078700	+		26317	15130	12958	13013							0.04118721076940801
PSVALFVH	8	Unmodified	_PSVALFVH_					0	0	0			REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	435.247621	868.480688	2.2199	0.00096622	0.078544	3.4186E-05	2.2985	0.0010004	435.2476045683731	43.625	0.37747	45.569	45.485	45.862	1.9438	-0.037036	-0.00070157	NaN	2.8892	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1069400	+		26318	15130	12958	13013							0.04118721076940801
PSVLLCIPAKL	11	Unmodified	_PSVLLCIPAKL_					0	0	0			REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3558227419853	2	577.354302	1152.69405	3.0564	0.0017646	0.15463	8.9278E-05	3.2111	0.0018539	577.3537418409114	107.48	0.15547	107.64	107.54	107.7	0.15781					19	7	3	0	0	0	1.0131	1	46234	46234		2.9952	0	1	28742000	+		26319	12691	12959	13014	30172	30172					0.12381265741623793
PSVLLCIPAKL	11	Unmodified	_PSVLLCIPAKL_					0	0	0			REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	577.354302	1152.69405	3.0564	0.0017646	0.15463	8.9278E-05	3.2111	0.0018539	577.3537418409114	107.48	0.15547	107.64	107.54	107.7	0.15781	0.022845	-0.0004977	NaN	2.9952	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28742000	+		26320	12691	12959	13014							0.12381265741623793
PSVLLCIPAKL	11	Unmodified	_PSVLLCIPAKL_					0	0	0			REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	REV__ENST00000373122.8_1_6:41126504-41129123:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	577.354302	1152.69405	3.2332	0.0018667	0.98393	0.00056808	4.2171	0.0024348	577.3543955425359	107.44	0.13706	107.6	107.52	107.66	0.15795	-0.022845	0.00045989	NaN	2.9952	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12955000	+		26321	12691	12959	13014							0.12381265741623793
PSWYLEYKK	9	Unmodified	_PSWYLEYKK_					0	0	0		nc|ENSG00000187243|Q96JG8-4|MAGED4	nc|ENSG00000187243|Q96JG8-4|MAGED4	nc|ENSG00000187243|Q96JG8-4|MAGED4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	607.2116577029228	2	607.316232	1212.61791	1.4513	0.00088142	-2.4996	-0.001518	-1.0482	-0.00063661	607.3158472699567	39.116	0.15878	40.952	40.848	41.007	1.8366					6	4	2	0	0	0	0.11684	1	16368	16368		4.3292	1.594	1	331340			26322	7951	12960	13015	30173	30173					0.02010585165817247
PSYCFTSF	8	Unmodified	_PSYCFTSF_					0	0	0		HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|47|2|sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|47|2|sense	HERVS71-int_dup151|chr19:36327347-36330482:-|1.071630613005121|0.3393407502360501|1.66|428.0|47|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1997863650322	2	476.199479	950.384405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.884	1	75.68	75.18	76.18	1.7962								0	0	0	1.0178	1	30993	30993		9.3474	0	1				26323	7645	12961	13016	30174	30174					-0.09277214545318202
PSYKEFVDK	9	Unmodified	_PSYKEFVDK_					0	0	0		tr|A0A7D6VQ61|A0A7D6VQ61_9CLOTPhosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_21835PE=3SV=1	tr|A0A7D6VQ61|A0A7D6VQ61_9CLOTPhosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_21835PE=3SV=1	tr|A0A7D6VQ61|A0A7D6VQ61_9CLOTPhosphoesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_21835PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	556.2833740115166	2	556.784764	1111.55498	0.75312	0.00041933	1.9248	0.0010717	2.6779	0.001491	556.7860656034961	50.96	0.3014	52.353	52.257	52.558	1.3938					13	9	2	0	0	0	0.11071	1	21374	21374		15.847	1.9411	1	1477400			26324	16783	12962	13017	30175	30175					0.0036601937779323634
PSYPPYFSPL	10	Unmodified	_PSYPPYFSPL_					0	0	0			REV__ENSG00000176542|ENST00000316407|USF3	REV__ENSG00000176542|ENST00000316407|USF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.7872192263603	2	584.289682	1166.56481	2.4729	0.0014449	-0.041282	-2.4121E-05	2.4316	0.0014208	584.289905234564	59.098	0.65202	61.067	60.663	61.315	1.969					65	20	5	0	0	0	0.65574	1	24680	24680		20.454	0	1	28764000	+		26325	11185	12963	13018	30176	30176					-0.011807926168103222
PTAGDVFV	8	Unmodified	_PTAGDVFV_					0	0	0		nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000119041|ENST00000263956|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	403.7399474978447	2	403.208161	804.401769	1.6434	0.00066264	3.002	0.0012105	4.6455	0.0018731	403.2090204068121	65.676	0.39147	67.585	67.407	67.799	1.9085					27	12	3	0	0	0	2.3239	1	27541	27541		2.3027	0	1	3414900			26326	2058	12964	13019	30177	30177					-0.008255509479909051
PTAVRTGRRAS	11	Unmodified	_PTAVRTGRRAS_					0	0	0			REV__ENST00000408991.3_1_19:49622324-49622396:-|nuORF	REV__ENST00000408991.3_1_19:49622324-49622396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3340942263603	2	586.336353	1170.65815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.211	1	93.538	93.038	94.038	1.3269								0	0	0	0.63775	1	38819	38819		5.7319	2.4505	1		+		26327	12910	12965	13020	30178	30178					0.07964944609011582
PTCAGCHSIT	10	Unmodified	_PTCAGCHSIT_					0	0	0			REV__ENST00000270460.10_2_19:56208640-56208850:+|nuORF	REV__ENST00000270460.10_2_19:56208640-56208850:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2109863162041	2	495.212595	988.410636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.758	1	41.62	41.12	42.12	1.8624								0	0	0	0.66052	1	16670	16670		3.5965	1.019	1		+		26328	12232	12966	13021	30179	30179					-0.0840326864548615
PTCMEFQWHAA	11	Unmodified	_PTCMEFQWHAA_					0	0	0			REV__chr17:76265625-76270194|140|21.76|0.24|6.49|+|0|UBALD2,UBALD2|1	REV__chr17:76265625-76270194|140|21.76|0.24|6.49|+|0|UBALD2,UBALD2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.8560668826103	3	440.854847	1319.54271	0.10945	4.825E-05	2.3963	0.0010564	2.5057	0.0011047	440.8563196980084	12.267	0.86546	12.267	11.88	12.746	0					97	27	7	0	0	0	0.98155	1	5160	5160		2.2527	1.143	1	77527000	+		26329	8277	12967	13022	30180	30180					-0.1042766362850216
PTCMEFQWHAA	11	Unmodified	_PTCMEFQWHAA_					0	0	0			REV__chr17:76265625-76270194|140|21.76|0.24|6.49|+|0|UBALD2,UBALD2|1	REV__chr17:76265625-76270194|140|21.76|0.24|6.49|+|0|UBALD2,UBALD2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.1895019412041	3	440.854847	1319.54271	0.19589	8.636E-05	2.2098	0.00097419	2.4057	0.0010606	440.8560459353282	11.826	0.43578	12.613	12.505	12.941	0.78751					32	13	4	0	0	0	0.98155	1	4896	4896		2.2527	0	1	3328600	+		26330	8277	12967	13022	30181	30181					-0.1042766362850216
PTCPARPK	8	Unmodified	_PTCPARPK_					0	0	0		ENST00000525503.5_1_11:82996703-82996883:-|nuORF	REV__ENSG00000135931|ENST00000611582|ARMC9;ENST00000525503.5_1_11:82996703-82996883:-|nuORF	REV__ENSG00000135931|ENST00000611582|ARMC9	MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2386657595634	2	435.23673	868.458907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.54	1	101.71	101.21	102.21	0.17032								0	0	0	1.0178	1	42725	42725		0.69038	0	1				26331	9964;7118	12968	13023	30182	30182					0.01941593056722013
PTEENFLLL	9	Unmodified	_PTEENFLLL_					0	0	0		nc|ENSG00000104327|P05937-2|CALB1;ENSG00000104327|ENST00000265431|CALB1	nc|ENSG00000104327|P05937-2|CALB1	nc|ENSG00000104327|P05937-2|CALB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2879516482353	2	538.28714	1074.55973	2.7506	0.0014806	0.17337	9.3322E-05	2.9239	0.0015739	538.2866751573406	69.963	0.41711	71.801	71.624	72.041	1.8378					19	12	2	0	0	0	0.037761	1	29343	29343		78.149	23.376	1	5206000			26332	1457	12969	13024	30183	30183					0.025429035205888795
PTEERQLSIK	10	Unmodified	_PTEERQLSIK_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8383056521416	2	600.832777	1199.651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.307	1	81.558	81.058	82.058	1.2512								0	0	0	0.36226	1	33707	33707		30.637	7.9003	1		+		26333	9240	12970	13025	30184	30184					0.05916167217901602
PTEERQLSIK	10	Unmodified	_PTEERQLSIK_					0	0	0			REV__nc|ENSG00000107862|Q92538-3|GBF1	REV__nc|ENSG00000107862|Q92538-3|GBF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8354980349541	2	600.832777	1199.651	1.4033	0.00084316	3.679	0.0022104	5.0823	0.0030536	600.835280016087	79.808	0.49461	81.525	81.353	81.848	1.7167					25	15	3	0	0	0	0.57775	1	33495	33495		24.021	4.7636	1	1018600	+		26334	9240	12970	13025	30185	30185					0.05916167217901602
PTERECLRR	9	Unmodified	_PTERECLRR_					0	0	0			REV__nc|ENSG00000100997|Q8N2K0-3|ABHD12	REV__nc|ENSG00000100997|Q8N2K0-3|ABHD12	MSMS	GG20161007_CRH_Patient100_A02_02	2	580.3058349490166	2	580.303664	1158.59277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.829	1	46.158	45.658	46.658	0.32899								0	0	0	0.42693	1	19236	19236		3.9444	1.6417	1		+		26335	9019	12971	13026	30186	30186					0.019822070916461598
PTFFQKKLK	9	Unmodified	_PTFFQKKLK_					0	0	0			REV__nc|ENSG00000101868|P09884|POLA1	REV__nc|ENSG00000101868|P09884|POLA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	380.1121703982353	3	379.565732	1135.67537	0.21574	8.1886E-05	-1.3056	-0.00049557	-1.0899	-0.00041368	379.5649564492981	21.751	0.86109	23.367	22.813	23.674	1.6158					50	28	2	0	0	0	0.11852	1	9075	9075		0.86438	0	1	603350	+		26336	9047	12972	13027	30187	30187					0.11295472162055376
PTFFQKKLK	9	Unmodified	_PTFFQKKLK_					0	0	0			REV__nc|ENSG00000101868|P09884|POLA1	REV__nc|ENSG00000101868|P09884|POLA1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	379.565732	1135.67537	0.29431	0.00011171	-0.44692	-0.00016963	-0.1526	-5.7923E-05	379.56547335273183	22.189	1.0705	23.366	22.597	23.667	1.177	-0.00069036	0.00049003	NaN	0.86438	72	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	778290	+		26337	9047	12972	13027							0.11295472162055376
PTFLSQQP	8	Unmodified	_PTFLSQQP_					0	0	0		GLI2|p.A325S|1|0.5|ENSG00000074047|chr2:120970520-120970520|G/T|missense_variant	GLI2|p.A325S|1|0.5|ENSG00000074047|chr2:120970520-120970520|G/T|missense_variant	GLI2|p.A325S|1|0.5|ENSG00000074047|chr2:120970520-120970520|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1722900271416	2	459.239993	916.465432	1.3176	0.00060511	3.5386	0.0016251	4.8563	0.0022302	459.24170832374915	70.947	0.27431	72.771	72.667	72.941	1.824					15	8	2	0	0	0	2.3239	1	29836	29836		8.5933	0	1	848240			26338	7590	12973	13028	30188	30188					0.0038580948910293955
PTGPSGCTRCS	11	Unmodified	_PTGPSGCTRCS_					0	0	0			REV__ENST00000549775.5_1_17:6920636-6920723:+|nuORF	REV__ENST00000549775.5_1_17:6920636-6920723:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2278930544853	2	533.226233	1064.43791	2.0121	0.0010729	1.156	0.0006164	3.1681	0.0016893	533.2271790600635	67.707	1.1038	69.085	68.633	69.737	1.3778					161	35	9	0	0	0	0.89436	1	28419	28419		10.151	3.7965	1	108340000	+		26339	13823	12974	13029	30189	30189					-0.09172785105101866
PTHLHIIC	8	Unmodified	_PTHLHIIC_					0	0	0			REV__nc|ENSG00000075340|P35612-2|ADD2	REV__nc|ENSG00000075340|P35612-2|ADD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2548095583916	2	467.25238	932.490207	3.5776	0.0016716	0.23735	0.0001109	3.815	0.0017825	467.2525696343393	97.792	0.10549	98.049	97.985	98.09	0.25636					6	3	2	0	0	0	0.89176	1	41138	41138		0.79363	0	1	18878000	+		26340	8760	12975	13030	30190	30190					0.021261660908407976
PTIHFWLAFPL	11	Unmodified	_PTIHFWLAFPL_					0	0	0		ENSG00000197428|ENST00000641817|OR51D1	ENSG00000197428|ENST00000641817|OR51D1	ENSG00000197428|ENST00000641817|OR51D1	MSMS	GG20161007_CRH_Patient100_A02_02	2	447.9160034060478	3	447.916653	1340.72813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.75	1	48.08	47.58	48.58	0.33034								0	0	0	0.63775	1	20029	20029		0.50596	0.051438	1				26341	5005	12976	13031	30191	30191					0.07139430224901844
PTKANTARIV	10	Unmodified	_PTKANTARIV_					0	0	0			REV__tr|A0A7D6VUH7|A0A7D6VUH7_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17505PE=4SV=1	REV__tr|A0A7D6VUH7|A0A7D6VUH7_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.8182861208916	2	535.819473	1069.62439	2.4748	0.0013261	-1.793	-0.00096073	0.68182	0.00036533	535.8183013880017	83.791	0.48778	84.061	83.77	84.257	0.27029					49	15	4	0	0	0	0.88579	1	35063	35063		2.9952	0.69251	1	10319000	+		26342	15514	12977	13032	30192	30192					0.09236523117237994
PTKDFSYH	8	Unmodified	_PTKDFSYH_					0	0	0		ENST00000343348.10_1_5:115781916-115782288:-|nuORF	ENST00000343348.10_1_5:115781916-115782288:-|nuORF	ENST00000343348.10_1_5:115781916-115782288:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	497.3128845095634	2	497.735074	993.455596	1.6111	0.00080188	1.4467	0.00072008	3.0578	0.001522	497.73580232018134	75.953	0.50445	75.953	75.691	76.196	0					23	15	2	0	0	0	2.3239	1	31585	31585		2.3027	0	1	450340			26343	5949	12978	13033	30193	30193					-0.04139378516288161
PTKDHVRL	8	Unmodified	_PTKDHVRL_					0	0	0			REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	REV__ENST00000433921.5_1_2:219503064-219516433:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2801391482353	2	483.279983	964.545414	1.1348	0.00054843	-2.887	-0.0013952	-1.7522	-0.00084679	483.27872040161424	77.566	0.42279	79.317	79.136	79.559	1.7514					32	13	3	0	0	0	0.88163	1	32508	32508		7.9102	1.187	1	4103600	+		26344	9442	12979	13034	30194	30194					0.06172295882936396
PTKFGLGVF	9	Unmodified	_PTKFGLGVF_					0	0	0		ENSG00000040531|ENST00000046640|CTNS;nc|ENSG00000040531|O60931-2|CTNS	ENSG00000040531|ENST00000046640|CTNS	ENSG00000040531|ENST00000046640|CTNS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2780334353447	2	483.276378	964.538203	1.8794	0.00090826	3.1786	0.0015361	5.0579	0.0024444	483.2773988040777	78.988	0.48094	78.988	78.756	79.237	0					38	15	3	0	0	0	0.71526	1	32926	32926		6.7232	0	1	11217000			26345	660	12980	13035	30195	30195					0.05451563282531424
PTKFGLGVF	9	Unmodified	_PTKFGLGVF_					0	0	0		ENSG00000040531|ENST00000046640|CTNS;nc|ENSG00000040531|O60931-2|CTNS	ENSG00000040531|ENST00000046640|CTNS	ENSG00000040531|ENST00000046640|CTNS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2783080935478	2	483.276378	964.538203	2.4585	0.0011881	2.6469	0.0012792	5.1054	0.0024673	483.2774638358499	78.785	0.45412	79.095	78.895	79.349	0.30933					37	14	3	0	0	0	0.71526	1	32945	32945		6.7232	0	1	9201100			26346	660	12980	13035	30196	30196					0.05451563282531424
PTKGPGRR	8	Unmodified	_PTKGPGRR_					0	0	0			REV__ENST00000358607.10_1_19:18699645-18700248:+|nuORF	REV__ENST00000358607.10_1_19:18699645-18700248:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7601501345634	2	434.759218	867.503883	1.8739	0.0008147	0.38887	0.00016906	2.2628	0.00098377	434.75929391937945	68.908	0.62457	69.23	68.844	69.469	0.32224					50	19	4	0	0	0	0.88663	1	28834	28834		4.756	2.1785	1	16388000	+		26347	12575	12981	13036	30197	30197					0.06483159914284897
PTKGPLIVVI	10	Unmodified	_PTKGPLIVVI_					0	0	0			REV__ENSG00000134698|ENST00000373210|AGO4	REV__ENSG00000134698|ENST00000373210|AGO4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	347.0431701540947	3	346.230349	1035.66922	-1.2008	-0.00041576	3.3517	0.0011605	2.1509	0.0007447	346.23120263418656	56.404	0.46895	56.404	56.256	56.725	0					19	15	2	0	0	0	0.12561	1	23649	23649		0.15932	0	1	1154400	+		26348	9913	12982	13037	30198	30198					0.1528095393057356
PTKKKKKKK	9	Unmodified	_PTKKKKKKK_					0	0	0		AluJb_dup53617|chr8:11864197-11864505:+|1.3540017899668186|0.1824579183855656|2.89|429.0|8|3|sense	AluJb_dup53617|chr8:11864197-11864505:+|1.3540017899668186|0.1824579183855656|2.89|429.0|8|3|sense	AluJb_dup53617|chr8:11864197-11864505:+|1.3540017899668186|0.1824579183855656|2.89|429.0|8|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3954955935478	2	557.395151	1112.77575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.36	1	106.51	106.01	107.01	0.15781								0	0	0	0.42693	1	45530	45530		1.8442	0	1				26349	34	12983	13038	30199	30199					0.22387129215735513
PTKRILIPHAL	11	Unmodified	_PTKRILIPHAL_					0	0	0			REV__tr|A0A7D6VVT4|A0A7D6VVT4_9CLOTPHPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06275PE=4SV=1	REV__tr|A0A7D6VVT4|A0A7D6VVT4_9CLOTPHPdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06275PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.2764465212822	3	420.271319	1257.79213	4.0577	0.0017053	3.2818	0.0013792	7.3394	0.0030845	420.27299531238293	91.646	0.39656	92.582	92.403	92.8	0.93624					28	12	3	0	0	0	1.0391	1	38580	38580		0.40827	0	1	2910300	+		26350	15537	12984	13039	30200	30200					0.17354210381859048
PTKSRRHKP	9	Unmodified	_PTKSRRHKP_					0	0	0			REV__ENST00000461049.1_1_3:169780199-169780457:+|nuORF	REV__ENST00000461049.1_1_3:169780199-169780457:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8316528201103	2	553.830706	1105.64686	1.9187	0.0010627	-0.46045	-0.00025501	1.4583	0.00080764	553.8302104494187	72.464	2.1267	72.789	71.785	73.912	0.32494					193	67	4	0	0	0	0.83753	2	30189	30189;30763		1.8442	0	1	7300500	+		26351	13193	12985	13040	30201;30202	30201					0.09826167305504896
PTKTRART	8	Unmodified	_PTKTRART_					0	0	0		ENST00000452284.1_1_22:21356738-21362956:+|nuORF;ENST00000436079.1_1_22:21356738-21363657:+|nuORF;ENST00000429962.1_1_22:21356738-21357321:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	ENST00000452284.1_1_22:21356738-21362956:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7783080935478	2	465.777608	929.540663	2.6459	0.0012324	-0.74775	-0.00034828	1.8982	0.00088414	465.7771176758713	77.581	0.56447	77.897	77.574	78.138	0.31653					50	17	4	0	0	0	0.89051	1	32486	32486		2.3027	0	1	17927000			26352	6493	12986	13041	30203	30203					0.07307411740168845
PTKTTITLI	9	Unmodified	_PTKTTITLI_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3094970583916	2	494.307875	986.601197	2.6287	0.0012994	0.39674	0.00019611	3.0255	0.0014955	494.30783064373657	83.056	0.42978	84.244	84.022	84.452	1.1879					28	13	3	0	0	0	0.083604	1	34859	34859		54.774	6.4277	1	2471300			26353	527	12987	13042	30204	30204					0.10736084279915303
PTLFAAPTF	9	Unmodified	_PTLFAAPTF_					0	0	0			REV__tr|A0A7D6VRJ1|A0A7D6VRJ1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07135PE=4SV=1	REV__tr|A0A7D6VRJ1|A0A7D6VRJ1_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07135PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	482.2673522830009	2	482.760561	963.506569	2.0815	0.0010048	2.4293	0.0011728	4.5107	0.0021776	482.7620121361063	46.283	0.15476	46.283	46.233	46.387	0					7	4	2	0	0	0	0.11463	1	19352	19352		12.532	3.1841	1	482130	+		26354	15411	12988	13043	30205	30205					0.023355705285553086
PTLQDSPPHL	10	Unmodified	_PTLQDSPPHL_					0	0	0		ENST00000417536.5_1_22:38030666-38030720:+|nuORF	ENST00000417536.5_1_22:38030666-38030720:+|nuORF	ENST00000417536.5_1_22:38030666-38030720:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7869140505791	2	552.787838	1103.56112	1.3652	0.00075464	-1.0561	-0.00058383	0.30901	0.00017082	552.7868548589117	45.612	0.32074	47.583	47.375	47.695	1.9703					20	9	3	0	0	0	0.75645	2	19077	19077;19130		15.847	7.2539	1	2367800			26355	6416	12989	13044	30206;30207	30206					0.013485376093285595
PTLQEVILANL	11	Unmodified	_PTLQEVILANL_					0	0	0		nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.8566161990166	2	605.855721	1209.69689	1.9054	0.0011544	-0.092158	-5.5835E-05	1.8132	0.0010986	605.855620955848	69.978	0.50345	69.978	69.738	70.241	0					52	15	4	0	0	0	0.10188	3	29139	29090;29139;29178		55.503	27.008	1	36754000			26356	4528	12990	13045	30208;30209;30210	30209					0.10042812400138246
PTLQEVILANL	11	Unmodified	_PTLQEVILANL_					0	0	0		nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.8564330935478	2	605.855721	1209.69689	1.2401	0.00075132	1.1489	0.00069605	2.389	0.0014474	605.8564204555154	69.541	0.50335	69.864	69.625	70.129	0.32223					55	15	5	0	0	0	0.10188	3	29070	29070;29107;29146		55.503	28.522	1	30565000			26357	4528	12990	13045	30211;30212;30213	30211					0.10042812400138246
PTLQEVILANL	11	Unmodified	_PTLQEVILANL_					0	0	0		nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.8577758669853	2	605.855721	1209.69689	2.1981	0.0013317	0.35285	0.00021378	2.551	0.0015455	605.855981625159	68.522	0.61566	69.888	69.571	70.187	1.3657					65	19	5	0	0	0	0.10188	4	28730	28680;28730;28783;28822		55.503	22.717	1	67847000			26358	4528	12990	13045	30214;30215;30216;30217	30215					0.10042812400138246
PTLQEVILANL	11	Unmodified	_PTLQEVILANL_					0	0	0		nc|ENSG00000179869|Q86UQ4-3|ABCA13;nc|ENSG00000179869|Q86UQ4|ABCA13;ENSG00000179869|ENST00000435803|ABCA13;nc|ENSG00000179869|Q86UQ4-4|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	nc|ENSG00000179869|Q86UQ4-3|ABCA13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.8567382693291	2	605.855721	1209.69689	2.304	0.0013959	0.0051319	3.1092E-06	2.3091	0.001399	605.8558030708834	68.001	0.55653	69.871	69.58	70.137	1.87					65	17	5	0	0	0	0.14563	4	28471	28471;28520;28559;28598		47.594	24.936	1	77121000			26359	4528	12990	13045	30218;30219;30220;30221	30218					0.10042812400138246
PTLRQKAAQ	9	Unmodified	_PTLRQKAAQ_					0	0	0			REV__ENSG00000188976|ENST00000327044|NOC2L	REV__ENSG00000188976|ENST00000327044|NOC2L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1012.598498523235	1	1012.5898	1011.58253	2.2969	0.0023258	3.9153	0.0039646	6.2122	0.0062904	1012.5959582106407	72.603	0.37671	72.928	72.705	73.082	0.32494					27	11	4	0	0	0	0.39927	1	30382	30382		20.454	11.86	1	4488000	+		26360	11595	12991	13046	30222	30222					0.07719967428704422
PTLSLSTKK	9	Unmodified	_PTLSLSTKK_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5874511599541	1	974.588073	973.580796	1.8455	0.0017986	-0.77396	-0.00075429	1.0716	0.0010443	974.5865962689988	93.641	0.28508	93.641	93.552	93.837	0					12	8	2	0	0	0	0.34572	1	39155	39155		23.148	0	1	431980	+		26361	10058	12992	13047	30223	30223					0.0929491362007866
PTLTKTLKLHQ	11	Unmodified	_PTLTKTLKLHQ_					0	0	0		tr|A0A553SUN2|A0A553SUN2_NIACIAminoacidpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02760PE=4SV=1	tr|A0A553SUN2|A0A553SUN2_NIACIAminoacidpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02760PE=4SV=1	tr|A0A553SUN2|A0A553SUN2_NIACIAminoacidpermeaseOS=NialliacirculansOX=1397GN=CEQ21_02760PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.6999694705009	4	320.698769	1278.76597	1.3893	0.00044555	2.5401	0.0008146	3.9294	0.0012602	320.6997533231677	40.294	1.1013	42.157	41.987	43.089	1.8624					85	34	3	0	0	0	1.0362	1	16932	16932		1.3296	0	1	190230000			26362	16699	12993	13048	30224	30224					0.13773896419684206
PTNLVWGVSL	10	Unmodified	_PTNLVWGVSL_					0	0	0		ENST00000453355.2_1_17:40214759-40215074:-|nuORF	ENST00000453355.2_1_17:40214759-40215074:-|nuORF	ENST00000453355.2_1_17:40214759-40215074:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3032104372978	2	543.303124	1084.5917	1.9307	0.0010489	-0.48626	-0.00026419	1.4444	0.00078476	543.3027116023866	65.237	0.38406	65.564	65.356	65.74	0.32689					25	11	3	0	0	0	0.28421	1	27352	27352		40.239	0.28951	1	1391100			26363	6627	12994	13049	30225	30225					0.05278315994382865
PTPAVVRRKQS	11	Unmodified	_PTPAVVRRKQS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8706542849541	2	619.870028	1237.7255	2.0914	0.0012964	-1.2415	-0.00076954	0.84999	0.00052689	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	1.0362	1	33091	33091		1.3295	0.13619	1	9211600	+		26364	12025	12995	13050	30226	30226					0.11614974819940471
PTPAVVRRKQS	11	Unmodified	_PTPAVVRRKQS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8696777224541	2	619.870028	1237.7255	1.6732	0.0010372	-0.23431	-0.00014524	1.4389	0.00089193	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	1.0362	2	33001	33001;33101		1.3295	0	1	8897800	+		26365	12025	12995	13050	30227;30228	30227					0.11614974819940471
PTPAVVRRKQS	11	Unmodified	_PTPAVVRRKQS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8705322146416	2	619.870028	1237.7255	2.3482	0.0014556	-0.38711	-0.00023996	1.961	0.0012156	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	1.0362	1	32929	32929		1.3295	1.0225	1	8928300	+		26366	12025	12995	13050	30229	30229					0.11614974819940471
PTPAVVRRKQS	11	Unmodified	_PTPAVVRRKQS_					0	0	0			REV__ENSG00000278803|ENST00000458091|PWWP4	REV__ENSG00000278803|ENST00000458091|PWWP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8698608279228	2	619.870028	1237.7255	1.4221	0.00088151	-0.14137	-8.7632E-05	1.2807	0.00079388	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	1.0362	1	32762	32762		1.3295	0.13619	1	7012900	+		26367	12025	12995	13050	30230	30230					0.11614974819940471
PTPEDEDD	8	Unmodified	_PTPEDEDD_					0	0	0		nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1726562380791	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.868	1	54.269	53.769	54.769	1.4005								0	0	0	1.0178	1	22130	22130		0.69038	0.69038	1				26368	5344	12996	13051	30231	30231					-0.13172554883033172
PTPEDEDD	8	Unmodified	_PTPEDEDD_					0	0	0		nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1730529665947	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.062	1	54.462	53.962	54.962	1.4005								0	0	0	1.0178	1	22209	22209		0.69038	0.69038	1				26369	5344	12996	13051	30232	30232					-0.13172554883033172
PTPEDEDD	8	Unmodified	_PTPEDEDD_					0	0	0		nc|ENSG00000242265|Q86TG7-2|PEG10;nc|ENSG00000242265|Q86TG7-3|PEG10;nc|ENSG00000242265|Q86TG7-5|PEG10;nc|ENSG00000242265|Q86TG7|PEG10;ENSG00000242265|ENST00000612748|PEG10;nc|ENSG00000242265|Q86TG7-4|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	nc|ENSG00000242265|Q86TG7-2|PEG10	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1729614138603	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.161	1	54.561	54.061	55.061	1.4005								0	0	0	1.0178	1	22249	22249		0.69038	0.69038	1				26370	5344	12996	13051	30233	30233					-0.13172554883033172
PTPSPGGG	8	Unmodified	_PTPSPGGG_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	335.1649658083916	2	335.163754	668.312954	2.4858	0.00083315	1.1197	0.00037529	3.6055	0.0012084	335.16424061829764	97.24	0.17922	97.524	97.422	97.601	0.28442					10	5	2	0	0	0	0.89198	1	40938	40938		0	0	1	6058800	+		26371	10624	12997	13052	30234	30234					-0.03446966187641465
PTQPRPPAAPE	11	Unmodified	_PTQPRPPAAPE_					0	0	0			REV__ENSG00000128564|ENST00000249330|VGF	REV__ENSG00000128564|ENST00000249330|VGF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	580.6323730349541	2	580.806562	1159.59857	1.678	0.00097459	-3.0341	-0.0017623	-1.3562	-0.00078767	580.8055289493705	45.943	0.4997	47.318	46.96	47.46	1.3751					32	15	3	0	0	0	0.14606	1	19097	19097		8.1555	0	1	3208900	+		26372	9730	12998	13053	30235	30235					0.02515628874948561
PTRVIVSM	8	Unmodified	_PTRVIVSM_					0	0	0			REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	REV__nc|ENSG00000124406|Q9Y2Q0-3|ATP8A1	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.7601806521416	2	451.760038	901.505523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.156	1	94.156	93.656	94.656	0								0	0	0	1.0178	1	39348	39348		0.6015	0	1		+		26373	9646	12999	13054	30236	30236					0.0508303288801244
PTSHKVGFAF	10	Unmodified	_PTSHKVGFAF_					0	0	0		tr|A0A553SNZ0|A0A553SNZ0_NIACIFlagellarbiosyntheticproteinFliROS=NialliacirculansOX=1397GN=fliRPE=3SV=1	tr|A0A553SNZ0|A0A553SNZ0_NIACIFlagellarbiosyntheticproteinFliROS=NialliacirculansOX=1397GN=fliRPE=3SV=1	tr|A0A553SNZ0|A0A553SNZ0_NIACIFlagellarbiosyntheticproteinFliROS=NialliacirculansOX=1397GN=fliRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7879516482353	2	545.787641	1089.56073	2.5084	0.001369	0.48435	0.00026435	2.9927	0.0016334	545.7878872273063	44.737	0.53398	46.103	45.867	46.401	1.3653					55	16	5	0	0	0	0.846	1	18866	18866		7.2892	1.5288	1	57014000			26374	16442	13000	13055	30237	30237					0.019531626801381208
PTSLFAVTV	9	Unmodified	_PTSLFAVTV_					0	0	0		ENSG00000153187|ENST00000640218|HNRNPU;nc|ENSG00000153187|Q00839-2|HNRNPU;ENST00000476241.2_2_1:245025757-245027609:-|nuORF	ENSG00000153187|ENST00000640218|HNRNPU	ENSG00000153187|ENST00000640218|HNRNPU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7670165896416	2	467.765843	933.517133	2.3386	0.0010939	0.68943	0.00032249	3.028	0.0014164	467.76617277128844	68.159	0.46336	69.537	69.303	69.766	1.3778					49	14	5	0	0	0	0.12174	1	28539	28539		42.095	3.9434	1	46665000			26375	3348	13001	13056	30238	30238					0.047715531829908286
PTTSTPLIE	9	Unmodified	_PTTSTPLIE_					0	0	0			REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D	REV__nc|ENSG00000137872|Q8NFY4-4|SEMA6D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.5112792849541	1	958.509154	957.501877	1.7993	0.0017247	0.50605	0.00048505	2.3054	0.0022097	958.509811721892	63.981	0.44784	65.388	65.174	65.622	1.4071					32	13	3	0	0	0	0.051699	1	26885	26885		67.344	3.1075	1	8848800	+		26376	10034	13002	13057	30239	30239					0.021426415951509625
PTVFTYVLTI	10	Unmodified	_PTVFTYVLTI_					0	0	0			REV__OR10Q1|p.A280T|1|0.38|ENSG00000180475|chr11:58228038-58228038|C/T|missense_variant	REV__OR10Q1|p.A280T|1|0.38|ENSG00000180475|chr11:58228038-58228038|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3317138552666	2	577.328808	1152.64306	4.6717	0.0026971	0.038214	2.2062E-05	4.7099	0.0027191	577.3287953809688	88.304	0.38141	89.751	89.54	89.921	1.4467					25	11	3	0	0	0	0.74074	1	37206	37206		25.399	10.561	1	2316800	+		26377	14587	13003	13058	30240	30240					0.07284639968429474
PTVIMDLIQ	9	Unmodified	_PTVIMDLIQ_					0	0	0		nc|ENSG00000149930|Q9UL54-2|TAOK2;nc|ENSG00000149930|Q9UL54-3|TAOK2;nc|ENSG00000149930|Q9UL54-4|TAOK2;ENSG00000149930|ENST00000308893|TAOK2	nc|ENSG00000149930|Q9UL54-2|TAOK2	nc|ENSG00000149930|Q9UL54-2|TAOK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2854492068291	2	515.286085	1028.55762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.088	1	68.977	68.477	69.477	1.8889								0	0	0	0.21022	1	28145	28145		25.399	0	1				26378	3257	13004	13059	30241	30241					0.044481515111101544
PTVTPTNVL	9	Unmodified	_PTVTPTNVL_					0	0	0			REV__ENST00000538571.6_1_14:58909433-59003756:+|nuORF	REV__ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2697936892509	2	471.26875	940.522947	2.9139	0.0013732	0.10123	4.7707E-05	3.0152	0.001421	471.2687754535121	64.198	0.52872	65.605	65.272	65.801	1.4071					48	16	4	0	0	0	0.026836	1	26887	26887		92.491	3.5878	1	12069000	+		26379	8996	13005	13060	30242	30242					0.0503065169467618
PTVTPTNVL	9	Unmodified	_PTVTPTNVL_					0	0	0			REV__ENST00000538571.6_1_14:58909433-59003756:+|nuORF	REV__ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.2701904177666	2	471.26875	940.522947	3.1464	0.0014828	-0.076337	-3.5975E-05	3.07	0.0014468	471.2686549580197	63.609	0.49975	65.553	65.312	65.812	1.9444					50	15	4	0	0	0	0.026836	1	26688	26688		92.491	3.5878	1	11215000	+		26380	8996	13005	13060	30243	30243					0.0503065169467618
PTVVTYFVS	9	Unmodified	_PTVVTYFVS_					0	0	0			REV__ENSG00000176540|ENST00000319813|OR4C5	REV__ENSG00000176540|ENST00000319813|OR4C5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7733032107353	2	506.771126	1011.5277	1.2652	0.00064118	0.68196	0.0003456	1.9472	0.00098678	506.77146743706186	67.236	0.7404	69.125	68.797	69.538	1.8889					81	23	5	0	0	0	0.46905	1	28319	28319		16.942	1.1741	1	84871000	+		26381	11184	13006	13061	30244	30244					0.022395358374296848
PTWEYISI	8	Unmodified	_PTWEYISI_					0	0	0			REV__ENST00000510191.5_2_5:145552253-145562086:-|nuORF	REV__ENST00000510191.5_2_5:145552253-145562086:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7552673220634	2	504.755475	1007.4964	1.6124	0.00081384	-2.4146	-0.0012188	-0.80221	-0.00040492	504.7552047667732	66.276	0.34686	68.165	67.962	68.309	1.8889					26	10	3	0	0	0	0.87276	1	27854	27854		13.508	0	1	1883900	+		26382	13567	13007	13062	30245	30245					-0.007050371966556668
PVAIHKYLWY	10	Unmodified	_PVAIHKYLWY_					0	0	0			REV__tr|A0A553SL47|A0A553SL47_NIACIDUF2663familyproteinOS=NialliacirculansOX=1397GN=CEQ21_19925PE=4SV=1	REV__tr|A0A553SL47|A0A553SL47_NIACIDUF2663familyproteinOS=NialliacirculansOX=1397GN=CEQ21_19925PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	644.9852172732353	2	645.355691	1288.69683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.163	1	99.388	98.888	99.888	0.22545								0	0	0	0.66155	1	41725	41725		1.8442	0.19162	1		+		26383	14976	13008	13063	30246	30246					0.06402857190801114
PVANEVITL	9	Unmodified	_PVANEVITL_					0	0	0		tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2770568728447	2	478.276575	954.538597	0.7639	0.00036536	0.43448	0.0002078	1.1984	0.00057316	478.27675990875326	56.361	0.59652	57.772	57.552	58.149	1.4109					49	19	4	0	0	0	0.029093	1	23657	23657		88.904	3.6316	1	22073000			26384	16788	13009	13064	30247	30247					0.0595093821170849
PVANEVITL	9	Unmodified	_PVANEVITL_					0	0	0		tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	tr|A0A7D6VQA7|A0A7D6VQA7_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22455PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.2767211794853	2	478.276575	954.538597	0.91041	0.00043543	-0.33912	-0.0001622	0.57128	0.00027323	478.27645093270576	55.799	0.58068	57.768	57.599	58.18	1.9684					45	19	3	0	0	0	0.029093	1	23413	23413		88.904	3.6316	1	17393000			26385	16788	13009	13064	30248	30248					0.0595093821170849
PVCECPLANQL	11	Unmodified	_PVCECPLANQL_					0	0	0			REV__ENST00000333039.2_2_22:39218398-39218617:-|nuORF	REV__ENST00000333039.2_2_22:39218398-39218617:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.7825195193291	2	593.783384	1185.55222	2.2362	0.0013278	-3.596	-0.0021352	-1.3598	-0.00080741	593.7806080723199	43.809	1.2605	45.753	45.427	46.687	1.9438					87	39	4	0	0	0	0.62604	1	18442	18442		20.415	1.0526	1	2366000	+		26386	12457	13010	13065	30249	30249					-0.033138953430125184
PVDEFIKME	9	Unmodified	_PVDEFIKME_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2760497927666	2	554.273175	1106.5318	4.0531	0.0022465	-2.1385	-0.0011853	1.9146	0.0010612	554.2720071808649	91.49	0.43282	92.461	92.28	92.712	0.97109					26	13	3	0	0	0	0.44535	1	38540	38540		18.135	3.2967	1	767870	+		26387	10496	13011	13066	30250	30250					-0.017207427311632273
PVDEFIKME	9	Unmodified	_PVDEFIKME_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2729980349541	2	554.273175	1106.5318	3.42	0.0018956	-1.4148	-0.00078421	2.0051	0.0011114	554.2722973973343	91.068	0.37595	92.434	92.28	92.656	1.366					28	11	3	0	0	0	0.44535	1	38381	38381		18.135	5.6034	1	670590	+		26388	10496	13011	13066	30251	30251					-0.017207427311632273
PVDTIAPL	8	Unmodified	_PVDTIAPL_					0	0	0			REV__nc|ENSG00000124813|Q13950-3|RUNX2	REV__nc|ENSG00000124813|Q13950-3|RUNX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2386352419853	2	413.239461	824.46437	0.46811	0.00019344	-1.8595	-0.00076842	-1.3914	-0.00057498	413.2387038087496	71.107	0.71988	71.107	70.537	71.257	0					45	22	3	0	0	0	0.89008	1	29622	29622		2.5775	0	1	2872700	+		26389	9658	13012	13067	30252	30252					0.04511595120175116
PVDVNILAKC	10	Unmodified	_PVDVNILAKC_					0	0	0		nc|ENSG00000145147|O94813-3|SLIT2;nc|ENSG00000145147|O94813-2|SLIT2;ENSG00000145147|ENST00000504154|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	nc|ENSG00000145147|O94813-3|SLIT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3012573122978	2	536.296985	1070.57942	4.8496	0.0026008	3.5543	0.0019062	8.4039	0.004507	536.2990519724854	87.822	0.38242	89.317	89.11	89.492	1.4953					26	11	3	0	0	0	0.78468	1	37004	37004		13.906	1.3745	1	3146400			26390	3103	13013	13068	30253	30253					0.04694956259686478
PVEAVLEEI	9	Unmodified	_PVEAVLEEI_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion;VPS13A|p.L994Wfs*11|1|0.35|ENSG00000197969|chr9:77282135-77282135|T/-|frameshift_variant	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7748901247978	2	499.773865	997.533177	1.9753	0.00098719	0.4788	0.00023929	2.4541	0.0012265	499.77387221634234	69.064	0.51402	70.43	70.187	70.701	1.3657					51	16	4	0	0	0	0.051699	1	28979	28979		67.344	0	1	22887000			26391	5034	13014	13069	30254	30254					0.034312146292336365
PVEAVLEEI	9	Unmodified	_PVEAVLEEI_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion;VPS13A|p.L994Wfs*11|1|0.35|ENSG00000197969|chr9:77282135-77282135|T/-|frameshift_variant	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7752563357353	2	499.773865	997.533177	1.504	0.00075167	0.61669	0.0003082	2.1207	0.0010599	499.77399834593325	68.601	0.5526	70.454	70.185	70.737	1.853					46	17	4	0	0	0	0.028763	1	28808	28808		89.427	0	1	28419000			26392	5034	13014	13069	30255	30255					0.034312146292336365
PVEFFAPIM	9	Unmodified	_PVEFFAPIM_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.3157836794853	2	525.770071	1049.52559	3.1027	0.0016313	-1.1875	-0.00062437	1.9152	0.0010069	525.7676798202147	65.061	0.28384	66.46	66.348	66.632	1.3989					16	8	2	0	0	0	0.099861	1	27302	27302		20.871	9.7567	1	1309900	+		26393	14815	13015	13070	30256	30256					0.0028078382797502854
PVFAGHDS	8	Unmodified	_PVFAGHDS_					0	0	0			REV__ENST00000564629.1_1_16:31470274-31471003:-|nuORF	REV__ENST00000564629.1_1_16:31470274-31471003:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	415.1948730349541	2	415.195585	828.376617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.537	1	90.537	90.037	91.037	0								0	0	0	1.0178	1	37841	37841		0.79363	0	1		+		26394	13925	13016	13071	30257	30257					-0.04443605750577717
PVFFQHLH	8	Unmodified	_PVFFQHLH_					0	0	0			REV__PAQR6|p.T233*|1|0.09|ENSG00000160781|chr1:156244824-156244825|-/CA|frameshift_variant	REV__PAQR6|p.T233*|1|0.09|ENSG00000160781|chr1:156244824-156244825|-/CA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.3419677615166	2	512.771794	1023.52904	1.9138	0.00098134	-4.1399	-0.0021228	-2.2261	-0.0011415	512.7699529849323	79.608	0.1839	81.325	81.229	81.413	1.7167					7	5	2	0	0	0	2.3239	1	33417	33417		6.3541	1.1234	1	173870	+		26395	10611	13017	13072	30258	30258					0.018212147168583215
PVFIKQLP	8	Unmodified	_PVFIKQLP_					0	0	0		ENSG00000180785|ENST00000396952|OR51E1;OR51E1|p.I210Lfs*22|1|0.09|ENSG00000180785|chr11:4653154-4653154|A/-|frameshift_variant	ENSG00000180785|ENST00000396952|OR51E1	ENSG00000180785|ENST00000396952|OR51E1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.2171813845634	3	314.532139	940.574589	0.070371	2.2134E-05	-1.611	-0.0005067	-1.5406	-0.00048457	314.53057644287395	23.802	0.64457	25.043	24.561	25.206	1.241					22	20	2	0	0	0	2.3239	1	9806	9806		1.6526	0	1	268810			26396	4556	13018	13073	30259	30259					0.1019244017921892
PVFNHHTV	8	Unmodified	_PVFNHHTV_					0	0	0		ENST00000564508.2_1_16:72461754-72462081:+|nuORF	ENST00000564508.2_1_16:72461754-72462081:+|nuORF	ENST00000564508.2_1_16:72461754-72462081:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.2000305056572	2	475.745776	949.477	3.402	0.0016185	-0.57466	-0.00027339	2.8273	0.0013451	475.74516012229805	60.646	0.65044	62.612	62.292	62.942	1.9653					33	20	2	0	0	0	2.3239	1	25481	25481		2.5775	1.8871	1	741630			26397	7346	13019	13074	30260	30260					0.00024051303080341313
PVHIIPLVL	9	Unmodified	_PVHIIPLVL_					0	0	0		tr|A0A553SLQ2|A0A553SLQ2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21050PE=3SV=1	tr|A0A553SLQ2|A0A553SLQ2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21050PE=3SV=1	tr|A0A553SLQ2|A0A553SLQ2_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21050PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.2220031619072	3	334.223306	999.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.43	1	103.43	102.93	103.93	0								0	0	0	0.42693	1	43410	43410		0.26902	0	1				26398	16346	13020	13075	30261	30261					0.14824988621683133
PVIEVRPVE	9	Unmodified	_PVIEVRPVE_					0	0	0		tr|A0A7D6ZI26|A0A7D6ZI26_9CLOTUvrABCsystemproteinBOS=ClostridiumintestinaleOX=36845GN=uvrBPE=3SV=1	tr|A0A7D6ZI26|A0A7D6ZI26_9CLOTUvrABCsystemproteinBOS=ClostridiumintestinaleOX=36845GN=uvrBPE=3SV=1	tr|A0A7D6ZI26|A0A7D6ZI26_9CLOTUvrABCsystemproteinBOS=ClostridiumintestinaleOX=36845GN=uvrBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.3539306521416	2	519.303124	1036.5917	3.0718	0.0015952	-0.76851	-0.00039909	2.3032	0.0011961	519.3028259057365	74.026	0.52002	75.823	75.657	76.177	1.7962					45	16	4	0	0	0	0.11333	1	30991	30991		13.508	4.1604	1	16318000			26399	17095	13021	13076	30262	30262					0.07486315994378856
PVIFAKVK	8	Unmodified	_PVIFAKVK_					0	0	0		ENSG00000164100|ENST00000296499|NDST3;nc|ENSG00000164100|O95803-2|NDST3;nc|ENSG00000164100|O95803-3|NDST3	ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1978637576103	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.58	1	38.889	38.389	39.389	0.30857								0	0	0	1.0178	1	16231	16231		0.45834	0	1				26400	3750	13022	13077	30263	30263					0.12540744041837115
PVIFAKVK	8	Unmodified	_PVIFAKVK_					0	0	0		ENSG00000164100|ENST00000296499|NDST3;nc|ENSG00000164100|O95803-2|NDST3;nc|ENSG00000164100|O95803-3|NDST3	ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2003051638603	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.493	1	96.598	96.098	97.098	0.105								0	0	0	1.0178	1	40377	40377		0.45834	0	1				26401	3750	13022	13077	30264	30264					0.12540744041837115
PVIFAKVK	8	Unmodified	_PVIFAKVK_					0	0	0		ENSG00000164100|ENST00000296499|NDST3;nc|ENSG00000164100|O95803-2|NDST3;nc|ENSG00000164100|O95803-3|NDST3	ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.2004272341728	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.264	1	37.54	37.04	38.04	1.2762								0	0	0	1.0178	1	15223	15223		0.45834	0	1				26402	3750	13022	13077	30265	30265					0.12540744041837115
PVIVQAGSSKD	11	Unmodified	_PVIVQAGSSKD_					0	0	0		tr|A0A553SNM4|A0A553SNM4_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24805PE=3SV=1	tr|A0A553SNM4|A0A553SNM4_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24805PE=3SV=1	tr|A0A553SNM4|A0A553SNM4_NIACILLMclassflavin-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24805PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2180053591728	2	550.800946	1099.58734	0.77543	0.00042711	-1.3904	-0.00076581	-0.61493	-0.0003387	550.7997643774596	32.405	0.23972	34.23	34.155	34.395	1.8246					11	7	2	0	0	0	0.14606	1	13622	13622		5.7319	0.97584	1	535970			26403	16427	13023	13078	30266	30266					0.04152806780825813
PVKFIAFPSIF	11	Unmodified	_PVKFIAFPSIF_					0	0	0		ENST00000354300.4_1_12:110971964-110972120:-|nuORF	ENST00000354300.4_1_12:110971964-110972120:-|nuORF	ENST00000354300.4_1_12:110971964-110972120:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	421.7708007693291	3	422.58127	1264.72198	1.5864	0.00067037	1.6694	0.00070545	3.2557	0.0013758	422.5820981012822	80.487	1.1245	82.204	81.413	82.537	1.7167					48	36	2	0	0	0	0.14606	1	33482	33482		0.45452	0	1	1126400			26404	5975	13024	13079	30267	30267					0.10020911993365189
PVKHNHTT	8	Unmodified	_PVKHNHTT_					0	0	0			REV__nc|ENSG00000143322|P42684-4|ABL2	REV__nc|ENSG00000143322|P42684-4|ABL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.2496215701103	2	467.248683	932.482814	3.0434	0.001422	-1.3391	-0.00062568	1.7043	0.00079633	467.2480844529367	86.813	0.52169	86.813	86.551	87.072	0					39	20	2	0	0	0	0.89178	1	36210	36210		0.69038	0.69038	1	100180000	+		26405	10202	13025	13080	30268	30268					0.013871498147409511
PVKLDLNPAAL	11	Unmodified	_PVKLDLNPAAL_					0	0	0		ATP5I-WHSC1|3|fusion;nc|ENSG00000109685|O96028-3|NSD2	ATP5I-WHSC1|3|fusion	ATP5I-WHSC1|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8440429568291	2	575.845156	1149.67576	1.705	0.00098179	-3.1976	-0.0018413	-1.4926	-0.00085953	575.8430413575129	76.359	1.3657	76.359	76.105	77.47	0					78	43	3	0	0	0	1.0362	1	31848	31848		1.3295	0.13619	1	3135100			26406	90	13026	13081	30269	30269					0.10690847091291289
PVKRWTRRPQ	10	Unmodified	_PVKRWTRRPQ_					0	0	0			REV__ENST00000589145.1_1_17:74547086-74547188:-|nuORF	REV__ENST00000589145.1_1_17:74547086-74547188:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.6975890994072	4	331.699369	1322.76837	-1.9288	-0.00063977	-2.2425	-0.00074383	-4.1713	-0.0013836	331.6986574452879	39.628	0.61618	39.628	39.235	39.852	0					53	19	4	0	0	0	0.89803	1	16613	16613		0.69767	0.07084	1	3989200	+		26407	14051	13027	13082	30270	30270					0.11989789668018602
PVLDTKTIE	9	Unmodified	_PVLDTKTIE_					0	0	0			REV__PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant	REV__PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2891723513603	2	508.28714	1014.55973	1.8644	0.00094766	0.80042	0.00040684	2.6648	0.0013545	508.2874332748484	68.601	0.58502	70.454	70.152	70.737	1.853					29	18	3	0	0	0	0.24063	1	28748	28748		28.487	4.2769	1	7728300	+		26408	9182	13028	13083	30271	30271					0.05302903520578184
PVLDTKTIE	9	Unmodified	_PVLDTKTIE_					0	0	0			REV__PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant	REV__PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	508.28714	1014.55973	1.8644	0.00094766	0.80042	0.00040684	2.6648	0.0013545	508.2874332748484	68.601	0.58502	70.454	70.152	70.737	1.853	0.012228	0.00018811	NaN	28.487	29	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7728300	+		26409	9182	13028	13083							0.05302903520578184
PVLFLREDV	9	Unmodified	_PVLFLREDV_					0	0	0		ENSG00000100304|ENST00000216129|TTLL12	ENSG00000100304|ENST00000216129|TTLL12	ENSG00000100304|ENST00000216129|TTLL12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.3118774294853	2	544.310949	1086.60735	2.2099	0.0012028	-0.24793	-0.00013495	1.9619	0.0010679	544.310460920179	84.797	0.35052	84.797	84.622	84.972	0					18	10	2	0	0	0	0.75267	2	35305	35305;35369		5.2307	0	1	1291700			26410	1261	13029	13084	30272;30273	30272					0.06750602511419856
PVLFVTAKQKF	11	Unmodified	_PVLFVTAKQKF_					0	0	0			REV__sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	REV__sp|P16732|TRM3_HCMVATripartiteterminasesubunit3OS=Humancytomegalovirus(strainAD169)OX=10360GN=TRM3PE=1SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	426.0263549685478	3	426.592058	1276.75434	0.92829	0.000396	0.54602	0.00023293	1.4743	0.00062893	426.59214544286345	38.019	0.20879	39.839	39.701	39.91	1.8202					10	6	2	0	0	0	0.14606	1	15956	15956		2.4348	1.1051	1	873070	+		26411	14640	13030	13085	30274	30274					0.12703699396342927
PVLGEWFIFVE	11	Unmodified	_PVLGEWFIFVE_					0	0	0		nc|ENSG00000160111|Q8IZJ3-2|CPAMD8;ENSG00000160111|ENST00000443236|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	nc|ENSG00000160111|Q8IZJ3-2|CPAMD8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	668.3576537966728	2	668.352814	1334.69108	2.1181	0.0014157	3.4189	0.002285	5.537	0.0037007	668.3548885649383	93.786	0.3481	93.786	93.584	93.932	0					25	10	3	0	0	0	0.70499	1	39178	39178		18.146	1.0335	1	1182700			26412	3543	13031	13086	30275	30275					0.03711713888469603
PVLIKVPEI	9	Unmodified	_PVLIKVPEI_					0	0	0			REV__nc|ENSG00000064933|P54277-3|PMS1	REV__nc|ENSG00000064933|P54277-3|PMS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	336.5564758181572	3	336.554833	1006.64267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.479	1	36.753	36.253	37.253	1.2746								0	0	0	0.42693	1	14895	14895		0.96228	0	1		+		26413	8668	13032	13087	30276	30276					0.13961265039233695
PVLKLQRRRW	10	Unmodified	_PVLKLQRRRW_					0	0	0		ENST00000316846.2_11:65545618-65547282:-|nuORF	ENST00000316846.2_11:65545618-65547282:-|nuORF	ENST00000316846.2_11:65545618-65547282:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	339.1421081423759	4	338.716291	1350.83606	1.6562	0.00056099	2.6082	0.00088346	4.2645	0.0014444	338.71695293556377	75.073	0.15531	76.379	76.28	76.435	1.3063					6	4	2	0	0	0	0.12561	1	31509	31509		0	0	1	375700			26414	5833	13033	13088	30277	30277					0.17467239598818196
PVLPVLLLLA	10	Unmodified	_PVLPVLLLLA_					0	0	0		nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant;nc|ENSG00000075275|Q9NYQ6|CELSR1;ENSG00000075275|ENST00000674500|CELSR1	nc|ENSG00000075275|Q9NYQ6-2|CELSR1	nc|ENSG00000075275|Q9NYQ6-2|CELSR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3632690310478	2	524.362453	1046.71035	1.412	0.00074038	0.018028	9.4531E-06	1.43	0.00074984	524.3622100728865	109.45	0.48704	109.45	109.3	109.79	0					49	20	3	0	0	0	0.89803	1	47392	47392		0	0	1	15850000			26415	146	13034	13089	30278	30278					0.18886714970062712
PVLVDFNPVSM	11	Unmodified	_PVLVDFNPVSM_					0	0	0		GCKR|p.G207D|1|0.07|ENSG00000084734|chr2:27501205-27501205|G/A|missense_variant	GCKR|p.G207D|1|0.07|ENSG00000084734|chr2:27501205-27501205|G/A|missense_variant	GCKR|p.G207D|1|0.07|ENSG00000084734|chr2:27501205-27501205|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3172485232353	2	609.315374	1216.6162	1.8927	0.0011532	-0.89304	-0.00054414	0.99966	0.00060911	609.3148344031255	69.205	0.37901	70.571	70.35	70.729	1.3657					31	12	3	0	0	0	0.62604	1	28998	28998		20.415	2.2682	1	7069900			26416	7588	13035	13090	30279	30279					0.016552080855717577
PVMERYTS	8	Unmodified	_PVMERYTS_					0	0	0		ENST00000550071.1_1_12:56661074-56663089:+|nuORF;nc|ENSG00000135469|Q96MF6-3|COQ10A;ENST00000551911.5_1_12:56660746-56663089:+|nuORF;nc|ENSG00000135469|Q96MF6-2|COQ10A;ENSG00000135469|ENST00000308197|COQ10A	ENST00000550071.1_1_12:56661074-56663089:+|nuORF	ENST00000550071.1_1_12:56661074-56663089:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1606933474541	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.858	1	20.051	19.551	20.551	0.19342								0	0	0	1.0178	1	8251	8251		0.45834	0	1				26417	2669	13036	13091	30280	30280					-0.03250451733936188
PVNRWHTR	8	Unmodified	_PVNRWHTR_					0	0	0			REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	REV__ENST00000480568.1_1:147594391-147596156:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1916381716728	2	533.288674	1064.5628	2.3981	0.0012789	3.9695	0.0021169	6.3676	0.0033958	533.2909788081101	40.382	0.39844	41.692	41.577	41.976	1.3102					20	12	2	0	0	0	2.3239	1	16906	16906		9.3474	0.75416	1	1059300	+		26418	13351	13037	13092	30281	30281					0.03309636208587108
PVPALFDSLL	10	Unmodified	_PVPALFDSLL_					0	0	0		nc|ENSG00000187741|O15360-3|FANCA;ENSG00000187741|ENST00000389301|FANCA;FANCA|p.E886Rfs*3|1|0.09|ENSG00000187741|chr16:89765012-89765012|C/-|frameshift_variant	nc|ENSG00000187741|O15360-3|FANCA	nc|ENSG00000187741|O15360-3|FANCA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3067504763603	2	536.307875	1070.6012	2.1309	0.0011428	-1.6951	-0.00090911	0.43576	0.0002337	536.3066727817709	84.73	0.30898	85.889	85.655	85.964	1.159					16	9	2	0	0	0	0.73251	1	35523	35523		16.942	5.302	1	5493900			26419	4835	13038	13093	30282	30282					0.06872084279893897
PVPKKPQKKRL	11	Unmodified	_PVPKKPQKKRL_					0	0	0			REV__CACNA1S|p.L937Sfs*27|1|0.58|ENSG00000081248|chr1:201065882-201065882|G/-|frameshift_variant	REV__CACNA1S|p.L937Sfs*27|1|0.58|ENSG00000081248|chr1:201065882-201065882|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	330.0386230349541	4	330.472495	1317.86087	-2.3278	-0.00076928	-2.5362	-0.00083814	-4.864	-0.0016074	330.4716071175707	30.77	0.94677	30.77	30.254	31.201	0					46	30	2	0	0	0	0.14606	1	12696	12696		0.094841	0.094841	1	1028400	+		26420	8175	13039	13094	30283	30283					0.21465874681553032
PVPLPVPRA	9	Unmodified	_PVPLPVPRA_					0	0	0			REV__ATG4C-NFIA|1|fusion	REV__ATG4C-NFIA|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	316.0604431033134	3	315.867522	944.580737	1.0542	0.000333	-2.3241	-0.00073411	-1.2699	-0.00040111	315.86673944152693	47.786	2.2341	48.117	47.265	49.499	0.33034					154	73	3	0	0	0	0.11941	1	19700	19700		0.23584	0.23584	1	4321500	+		26421	8148	13040	13095	30284	30284					0.10622958410749561
PVPRLWLTRRL	11	Unmodified	_PVPRLWLTRRL_					0	0	0		ENST00000468303.5_1_1:24742805-24742964:-|nuORF	ENST00000468303.5_1_1:24742805-24742964:-|nuORF	ENST00000468303.5_1_1:24742805-24742964:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	352.0609924197197	4	352.474032	1405.86702	-0.93578	-0.00032984	0.24977	8.8039E-05	-0.68601	-0.0002418	352.72510654817535	53.028	0.31611	53.028	52.759	53.075	0					14	9	2	0	0	0	0.14606	1	22012	22012		0	0	1	819770			26422	6717	13041	13096	30285	30285					0.180323929130509
PVPTAILG	8	Unmodified	_PVPTAILG_					0	0	0		ENST00000229340.9_1_12:120534355-120534604:-|nuORF	ENST00000229340.9_1_12:120534355-120534604:-|nuORF	ENST00000229340.9_1_12:120534355-120534604:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	384.2381469607353	2	384.236722	766.45889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.3	1	103.48	102.98	103.98	0.18066								0	0	0	1.0178	1	43477	43477		0.79363	0	1				26423	5546	13042	13097	30286	30286					0.06631916328387888
PVPVSFIF	8	Unmodified	_PVPVSFIF_					0	0	0			REV__ENST00000473314.6_1_1:25664285-25664552:-|nuORF	REV__ENST00000473314.6_1_1:25664285-25664552:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	453.7929870486259	2	453.260197	904.50584	3.445	0.0015615	0.18181	8.2409E-05	3.6268	0.0016439	453.26046094485844	107.73	0.14857	107.89	107.81	107.96	0.15795					17	7	3	0	0	0	2.3239	1	46352	46352		5.7604	0	1	68321000	+		26424	13302	13043	13098	30287	30287					0.0497677587952694
PVQRKKRKNW	10	Unmodified	_PVQRKKRKNW_					0	0	0			REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	447.2730895876884	3	447.273834	1338.79967	1.3422	0.00060034	-3.4366	-0.0015371	-2.0944	-0.00093677	447.2719964188779	96.71	0.22778	96.71	96.602	96.83	0					26	7	5	0	0	0	0.8974	1	40417	40417		1.7423	1.0446	1	43433000	+		26425	9605	13044	13099	30288	30288					0.1438236270212201
PVQRKKRKNW	10	Unmodified	_PVQRKKRKNW_					0	0	0			REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	447.273834	1338.79967	1.3422	0.00060034	-3.4366	-0.0015371	-2.0944	-0.00093677	447.2719964188779	96.71	0.22778	96.71	96.602	96.83	0	-0.011437	0.00036136	NaN	1.7423	26	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43433000	+		26426	9605	13044	13099							0.1438236270212201
PVQRKKRKNW	10	Unmodified	_PVQRKKRKNW_					0	0	0			REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	447.273834	1338.79967	3.2382	0.0014484	-3.9528	-0.001768	-0.71455	-0.0003196	447.2716052968581	96.665	0.21385	96.77	96.664	96.878	0.105	0.047766	-0.00033123	NaN	1.7423	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26588000	+		26427	9605	13044	13099							0.1438236270212201
PVQRKKRKNW	10	Unmodified	_PVQRKKRKNW_					0	0	0			REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	REV__nc|ENSG00000122188|Q8IWV1-3|LAX1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	447.273834	1338.79967	4.0749	0.0018226	-4.6868	-0.0020963	-0.61186	-0.00027367	447.27071834477385	96.442	0.21617	96.726	96.589	96.806	0.28442	0.0045838	-0.0013161	NaN	1.7423	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12354000	+		26428	9605	13044	13099							0.1438236270212201
PVQTKFPA	8	Unmodified	_PVQTKFPA_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1;ENST00000462916.1_1_15:30024631-30025027:-|nuORF	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	444.2531310915947	2	444.252903	886.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.47	1	22.703	22.203	23.203	0.23306								0	0	0	1.0178	1	9361	9361		5.2307	0	1				26429	1449	13045	13100	30289	30289					0.043467037313689616
PVRAVLRLRRR	11	Unmodified	_PVRAVLRLRRR_					0	0	0		ENSG00000198113|ENST00000357503|TOR4A	ENSG00000198113|ENST00000357503|TOR4A	ENSG00000198113|ENST00000357503|TOR4A	MSMS	GG20161007_CRH_Patient100_W632_02	4	696.4608032107353	2	696.462753	1390.91095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.45	1	111.6	111.1	112.1	0.15038								0	0	0	0.63775	1	48303	48303		0.35063	0.35063	1				26430	5042	13046	13101	30290	30290					0.2311342213001808
PVRKVGGG	8	Unmodified	_PVRKVGGG_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;EIF3J-C21orf59|1|fusion;nc|ENSG00000104131|O75822-2|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	769.4718505740166	1	769.467898	768.460622	2.7375	0.0021064	1.9282	0.0014837	4.6657	0.0035901	769.469229632149	107.52	0.32619	107.57	107.46	107.79	0.052452					48	16	5	0	0	0	0.89198	1	46048	46048		0	0	1	449690000			26431	1450	13047	13102	30291	30291					0.06712970137004959
PVRKVGGG	8	Unmodified	_PVRKVGGG_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;EIF3J-C21orf59|1|fusion;nc|ENSG00000104131|O75822-2|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	769.4701415896416	1	769.467898	768.460622	2.7893	0.0021463	0.33986	0.00026151	3.1291	0.0024078	769.4679164904448	107.49	0.19666	107.65	107.52	107.72	0.15795					31	9	4	0	0	0	0.89198	1	46214	46214		0	0	1	150300000			26432	1450	13047	13102	30292	30292					0.06712970137004959
PVRLSQLRPLS	11	Unmodified	_PVRLSQLRPLS_					0	0	0			REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	REV__nc|ENSG00000141497|Q9H091-2|ZMYND15	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5940429568291	3	422.594461	1264.76155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.196	1	36.498	35.998	36.998	0.30197								0	0	0	0.63775	1	15220	15220		2.2527	0.16672	1		+		26433	10152	13048	13103	30293	30293					0.13976431996798055
PVRRRGKKFVS	11	Unmodified	_PVRRRGKKFVS_					0	0	0			REV__PLEKHN1|p.D497*|1|0.11|ENSG00000187583|chr1:973533-973534|-/C|frameshift_variant	REV__PLEKHN1|p.D497*|1|0.11|ENSG00000187583|chr1:973533-973534|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.9489318728447	3	443.945717	1328.81532	3.1968	0.0014192	3.6735	0.0016308	6.8703	0.00305	443.9472474118793	95.834	0.24789	95.957	95.831	96.079	0.12331					31	8	4	0	0	0	1.0362	2	40099	40099;40146		1.3296	0.11481	1	46088000	+		26434	11536	13049	13104	30294;30295	30294					0.16406649219152314
PVRRRGKKFVS	11	Unmodified	_PVRRRGKKFVS_					0	0	0			REV__PLEKHN1|p.D497*|1|0.11|ENSG00000187583|chr1:973533-973534|-/C|frameshift_variant	REV__PLEKHN1|p.D497*|1|0.11|ENSG00000187583|chr1:973533-973534|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	443.945717	1328.81532	3.1968	0.0014192	3.6735	0.0016308	6.8703	0.00305	443.9472474118793	95.834	0.24789	95.957	95.831	96.079	0.12331	0.015867	-0.00052812	NaN	1.3296	31	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	46088000	+		26435	11536	13049	13104							0.16406649219152314
PVRTLQAH	8	Unmodified	_PVRTLQAH_					0	0	0			REV__SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	REV__SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.2659789919853	2	461.266876	920.519199	3.0782	0.0014199	-3.6618	-0.0016891	-0.58357	-0.00026918	461.26450916970475	74.842	0.71861	76.624	76.195	76.913	1.7817					44	22	3	0	0	0	0.8873	1	31397	31397		4.3292	1.0479	1	6403400	+		26436	11438	13050	13105	30296	30296					0.0557602671146924
PVSFLFERWLA	11	Unmodified	_PVSFLFERWLA_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	682.8730346560478	2	682.871705	1363.72886	1.8589	0.0012694	0.57381	0.00039184	2.4327	0.0016612	682.8720559166538	62.12	0.65224	62.45	62.105	62.757	0.32974					57	20	4	0	0	0	0.77451	1	26024	26024		16.149	0	1	4637200	+		26437	8522	13051	13106	30297	30297					0.061542248739442584
PVSYQNTMSR	10	Unmodified	_PVSYQNTMSR_					0	0	0		ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	591.7856323122978	2	591.78223	1181.54991	2.2716	0.0013443	2.4939	0.0014758	4.7654	0.0028201	591.7838686073902	59.463	0.50341	59.463	59.194	59.697	0					59	20	5	0	0	0	0.4341	2	24772	24772;24810		31.268	3.6395	1	13889000			26438	2946	13052	13107	30298;30299	30298					-0.033606077564854786
PVSYQNTMSR	10	Unmodified	_PVSYQNTMSR_					0	0	0		ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	591.7870971560478	2	591.78223	1181.54991	2.3671	0.0014008	2.3023	0.0013624	4.6693	0.0027632	591.7838177349747	58.907	0.29173	59.232	59.056	59.348	0.32553					25	10	4	0	0	0	0.63205	1	24654	24654		21.537	6.6987	1	4361200			26439	2946	13052	13107	30300	30300					-0.033606077564854786
PVTRDIITR	9	Unmodified	_PVTRDIITR_					0	0	0			REV__nc|ENSG00000133704|O15397-2|IPO8	REV__nc|ENSG00000133704|O15397-2|IPO8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8213989138603	2	535.819473	1069.62439	2.9486	0.0015799	0.54653	0.00029284	3.4951	0.0018728	535.8196832997363	82.672	0.3012	84.342	84.113	84.415	1.67					27	9	4	0	0	0	0.68551	1	34703	34703		7.9102	1.187	1	5264200	+		26440	9881	13053	13108	30301	30301					0.09236523117215256
PVTRLPIKDGR	11	Unmodified	_PVTRLPIKDGR_					0	0	0			REV__ENST00000509152.3_1_4:68060-68243:+|nuORF	REV__ENST00000509152.3_1_4:68060-68243:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6927062869072	4	313.693753	1250.7459	-2.7068	-0.00084912	-0.59073	-0.00018531	-3.2976	-0.0010344	313.69353164398336	30.668	0.64194	30.668	30.254	30.896	0					84	20	5	0	0	0	1.0365	1	12859	12859		1.2148	0	1	22347000	+		26441	13559	13054	13109	30302	30302					0.1305614547973164
PVTRLPIKDGR	11	Unmodified	_PVTRLPIKDGR_					0	0	0			REV__ENST00000509152.3_1_4:68060-68243:+|nuORF	REV__ENST00000509152.3_1_4:68060-68243:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6927368044853	4	313.693753	1250.7459	-2.6816	-0.00084121	-0.61662	-0.00019343	-3.2983	-0.0010346	313.6935487403373	31.121	0.66912	31.121	30.896	31.565	0					98	21	5	0	0	0	0.97654	1	13040	13040		5.1984	1.6058	1	20258000	+		26442	13559	13054	13109	30303	30303					0.1305614547973164
PVVHLPCL	8	Unmodified	_PVVHLPCL_					0	0	0			REV__ENST00000393640.8_1_16:70432511-70432613:-|nuORF	REV__ENST00000393640.8_1_16:70432511-70432613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	439.2552368044853	2	439.251849	876.489145	2.6624	0.0011695	-0.17469	-7.6732E-05	2.4877	0.0010927	439.2514146861175	73.223	0.47614	73.548	73.34	73.816	0.32494					39	15	3	0	0	0	0.89176	1	30574	30574		0.79363	0	1	18127000	+		26443	12815	13055	13110	30304	30304					0.045959517218989276
PVVKIGKG	8	Unmodified	_PVVKIGKG_					0	0	0			REV__tr|A0A7D6VPP3|A0A7D6VPP3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=lonCPE=3SV=1	REV__tr|A0A7D6VPP3|A0A7D6VPP3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=lonCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2667724490166	2	399.265813	796.517074	2.6921	0.0010749	0.44402	0.00017728	3.1361	0.0012521	399.26626278636695	107.82	0.2084	107.98	107.9	108.11	0.15781					40	13	4	0	0	0	0.89198	1	46531	46531		0	0	1	1425500000	+		26444	15360	13056	13111	30305	30305					0.11067597973681131
PVVKLLGA	8	Unmodified	_PVVKLLGA_					0	0	0			REV__nc|ENSG00000126107|Q5T447-2|HECTD3	REV__nc|ENSG00000126107|Q5T447-2|HECTD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.7693664431572	2	398.768189	795.521825	-0.23989	-9.566E-05	2.2861	0.00091161	2.0462	0.00081595	398.7689411233633	15.65	0.13436	16.476	16.375	16.509	0.82643					20	11	2	0	0	0	0.89178	1	6492	6492		0.69038	0	1	2285200	+		26445	9693	13057	13112	30306	30306					0.11588482116428622
PVVKLLGA	8	Unmodified	_PVVKLLGA_					0	0	0			REV__nc|ENSG00000126107|Q5T447-2|HECTD3	REV__nc|ENSG00000126107|Q5T447-2|HECTD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.7686340212822	2	398.768189	795.521825	0.08901	3.5494E-05	2.1528	0.00085845	2.2418	0.00089395	398.76870119653313	15.664	0.15033	16.703	16.641	16.791	1.0392					14	12	2	0	0	0	0.89178	1	6502	6502		0.69038	0	1	4278800	+		26446	9693	13057	13112	30307	30307					0.11588482116428622
PVVPFITP	8	Unmodified	_PVVPFITP_					0	0	0			REV__nc|ENSG00000164398|Q9UKU0-7|ACSL6	REV__nc|ENSG00000164398|Q9UKU0-7|ACSL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2600585818291	2	435.260197	868.50584	0.69322	0.00030173	-0.076226	-3.3178E-05	0.61699	0.00026855	435.26018646113624	104.54	0.092453	104.54	104.49	104.58	0					7	4	2	0	0	0	0.89178	1	44153	44153		0.69038	0	1	29327000	+		26447	10736	13058	13113	30308	30308					0.06632775879518249
PVVTREPPCTK	11	Unmodified	_PVVTREPPCTK_					0	0	0			REV__ENSG00000225614|ENST00000565624|ZNF469	REV__ENSG00000225614|ENST00000565624|ZNF469	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.5559265017509	3	409.556907	1225.64889	-0.39338	-0.00016111	-1.2755	-0.00052241	-1.6689	-0.00068352	409.5564054502001	20.989	0.31183	20.989	20.848	21.16	0					19	9	3	0	0	0	0.95983	1	8757	8757		2.8433	0	1	844950	+		26448	11890	13059	13114	30309	30309					0.04509415208417522
PVWRDWRRERR	11	Unmodified	_PVWRDWRRERR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.9635497927666	3	537.96243	1610.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.394	1	20.394	19.894	20.894	0								0	0	0	0.63775	1	8477	8477		0.08335	0	1		+		26449	13931	13060	13115	30310	30310					0.08446151877001284
PVWRDWRRERR	11	Unmodified	_PVWRDWRRERR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.9629394412041	3	537.96243	1610.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.634	1	21.634	21.134	22.134	0								0	0	0	0.63775	1	8996	8996		0.08335	0	1		+		26450	13931	13060	13115	30311	30311					0.08446151877001284
PVWRDWRRERR	11	Unmodified	_PVWRDWRRERR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.9627563357353	3	537.96243	1610.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.131	1	22.131	21.631	22.631	0								0	0	0	0.63775	1	9204	9204		0.08335	0	1		+		26451	13931	13060	13115	30312	30312					0.08446151877001284
PVWRDWRRERR	11	Unmodified	_PVWRDWRRERR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.9634887576103	3	537.96243	1610.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.649	1	22.649	22.149	23.149	0								0	0	0	0.63775	1	9427	9427		0.08335	0	1		+		26452	13931	13060	13115	30313	30313					0.08446151877001284
PVWRDWRRERR	11	Unmodified	_PVWRDWRRERR_					0	0	0			REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	REV__ENST00000565219.1_1_16:29466524-29469442:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	537.9636108279228	3	537.96243	1610.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.988	1	22.988	22.488	23.488	0								0	0	0	0.63775	1	9578	9578		0.08335	0	1		+		26453	13931	13060	13115	30314	30314					0.08446151877001284
PVYIAVRFP	9	Unmodified	_PVYIAVRFP_					0	0	0			REV__nc|ENSG00000087074|O75807-2|PPP1R15A	REV__nc|ENSG00000087074|O75807-2|PPP1R15A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0699951052666	3	354.542927	1060.60695	0.40694	0.00014428	-2.7767	-0.00098446	-2.3698	-0.00084018	354.5420839867255	30.351	0.24926	32.166	32.044	32.294	1.8151					11	7	2	0	0	0	0.11938	1	12750	12750		1.1933	0	1	270850	+		26454	8864	13061	13116	30315	30315					0.07907227582222731
PWATLGPH	8	Unmodified	_PWATLGPH_					0	0	0			REV__ENST00000468018.5_1_2:242577129-242590612:+|nuORF	REV__ENST00000468018.5_1_2:242577129-242590612:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	439.2533447146416	2	439.729595	877.444637	2.8309	0.0012448	0.75464	0.00033184	3.5856	0.0015767	439.7291836203059	72.144	0.30074	73.955	73.742	74.042	1.8101					13	9	2	0	0	0	2.3239	1	30185	30185		5.2307	2.3415	1	1019500	+		26455	13255	13062	13117	30316	30316					0.0010126390008053932
PWGIKQAGF	9	Unmodified	_PWGIKQAGF_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000514806.5_1_5:54965038-54993786:-|nuORF;nc|ENSG00000177058|Q8NBW4-2|SLC38A9;ENST00000507447.1_1_5:54960464-54965471:-|nuORF	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2723266482353	2	502.271627	1002.5287	1.7474	0.00087766	-0.39162	-0.0001967	1.3558	0.00068096	502.27062791578976	42.877	0.31653	44.217	44.046	44.362	1.3399					19	9	3	0	0	0	0.013238	1	17966	17966		104.8	68.755	1	2429600			26456	4431	13063	13118	30317	30317					0.027537949969882902
PWGIKQAGF	9	Unmodified	_PWGIKQAGF_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000514806.5_1_5:54965038-54993786:-|nuORF;nc|ENSG00000177058|Q8NBW4-2|SLC38A9;ENST00000507447.1_1_5:54960464-54965471:-|nuORF	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2717773318291	2	502.271627	1002.5287	1.4239	0.00071519	-1.0187	-0.00051167	0.40521	0.00020352	502.27092607137934	42.293	0.31162	44.214	44.072	44.384	1.9211					19	9	3	0	0	0	0.031324	1	17732	17732		85.357	49.313	1	2015900			26457	4431	13063	13118	30318	30318					0.027537949969882902
PWHAKLAL	8	Unmodified	_PWHAKLAL_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2805053591728	2	468.276712	934.538872	3.3399	0.001564	4.4476	0.0020827	7.7876	0.0036467	468.27889707032307	103.43	0.080673	103.59	103.56	103.64	0.16445					5	3	2	0	0	0	0.89176	1	43601	43601		0.79363	0.79363	1	227120000	+		26458	9489	13064	13119	30319	30319					0.06898402722197261
PWHAKLAL	8	Unmodified	_PWHAKLAL_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	468.276712	934.538872	1.6328	0.00076461	6.3146	0.002957	7.9474	0.0037216	468.27962846642407	103.47	0.056366	103.47	103.43	103.48	0	-0.051557	0.00021427	NaN	0.79363	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32751000	+		26459	9489	13064	13119							0.06898402722197261
PWHAKLAL	8	Unmodified	_PWHAKLAL_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	468.276712	934.538872	3.4575	0.0016191	4.9341	0.0023105	8.3916	0.0039296	468.2790208794072	103.45	0.063293	103.51	103.46	103.52	0.059502	-0.012903	-0.0010786	NaN	0.79363	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	73784000	+		26460	9489	13064	13119							0.06898402722197261
PWHAKLAL	8	Unmodified	_PWHAKLAL_					0	0	0			REV__ENSG00000117000|ENST00000372771|RLF	REV__ENSG00000117000|ENST00000372771|RLF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	468.276712	934.538872	3.3399	0.001564	4.4476	0.0020827	7.7876	0.0036467	468.27889707032307	103.43	0.080673	103.59	103.56	103.64	0.16445	0.06446	-0.0015342	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227120000	+		26461	9489	13064	13119							0.06898402722197261
PWHLDIFEF	9	Unmodified	_PWHLDIFEF_					0	0	0		ENSG00000167325|ENST00000300738|RRM1	ENSG00000167325|ENST00000300738|RRM1	ENSG00000167325|ENST00000300738|RRM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.3004028201103	2	602.295299	1202.57605	5.6774	0.0034195	-1.0162	-0.00061206	4.6612	0.0028074	602.2951310179034	89.077	0.41908	90.125	89.812	90.231	1.0484					22	12	3	0	0	0	0.54523	1	37549	37549		13.508	5.5977	1	555580			26462	3964	13065	13120	30320	30320					-0.017139705226782098
PWKCYEEEQCV	11	Unmodified	_PWKCYEEEQCV_					0	0	0		ENSG00000259823|ENST00000590317|LYPD8	ENSG00000259823|ENST00000590317|LYPD8	ENSG00000259823|ENST00000590317|LYPD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.8682739138603	3	471.865301	1412.57407	2.5364	0.0011968	2.6564	0.0012535	5.1928	0.0024503	471.86654895908663	63.053	0.33927	64.998	64.782	65.121	1.9444					47	10	6	0	0	0	0.96769	1	26487	26487		2.6312	0.88896	1	4283200			26463	5415	13066	13121	30321	30321					-0.11571135385088382
PWKFYFKL	8	Unmodified	_PWKFYFKL_					0	0	0		nc|ENSG00000145555|Q9HD67-3|MYO10;ENSG00000145555|ENST00000513610|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	nc|ENSG00000145555|Q9HD67-3|MYO10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.2164794802666	2	564.81567	1127.61679	4.2163	0.0023814	2.8781	0.0016256	7.0944	0.004007	564.817243631404	92.488	0.42543	93.424	93.276	93.702	0.93623					19	12	2	0	0	0	2.3239	1	38996	38996		6.3541	1.1234	1	655060			26464	3112	13067	13122	30322	30322					0.05808415587603122
PWLALILVS	9	Unmodified	_PWLALILVS_					0	0	0			REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	REV__nc|ENSG00000005483|Q8IZD2-5|KMT2E	MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3187133669853	2	506.315503	1010.61645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.334	1	34.159	33.659	34.659	1.8246								0	0	0	0.42693	1	13553	13553		2.0598	0	1		+		26465	14377	13068	13123	30323	30323					0.11156995867770547
PWLFDAPKF	9	Unmodified	_PWLFDAPKF_					0	0	0		nc|ENSG00000149761|Q9BRQ3-2|NUDT22;ENST00000537707.1_1_11:63993896-63994784:+|nuORF;ENST00000422364.2_1_11:63994043-63994784:+|nuORF;nc|ENSG00000149761|Q9BRQ3-3|NUDT22;ENSG00000149761|ENST00000279206|NUDT22	nc|ENSG00000149761|Q9BRQ3-2|NUDT22	nc|ENSG00000149761|Q9BRQ3-2|NUDT22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7957031130791	2	560.794935	1119.57532	3.5404	0.0019854	-2.7577	-0.0015465	0.78268	0.00043892	560.7930400623336	72.943	0.40582	74.273	74.069	74.474	1.3297					30	12	3	0	0	0	0.053939	1	30623	30623		66.457	41.057	1	2711700			26466	3250	13069	13124	30324	30324					0.0203123482826868
PWLFDAPKF	9	Unmodified	_PWLFDAPKF_					0	0	0		nc|ENSG00000149761|Q9BRQ3-2|NUDT22;ENST00000537707.1_1_11:63993896-63994784:+|nuORF;ENST00000422364.2_1_11:63994043-63994784:+|nuORF;nc|ENSG00000149761|Q9BRQ3-3|NUDT22;ENSG00000149761|ENST00000279206|NUDT22	nc|ENSG00000149761|Q9BRQ3-2|NUDT22	nc|ENSG00000149761|Q9BRQ3-2|NUDT22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7953369021416	2	560.794935	1119.57532	2.6752	0.0015003	-1.8549	-0.0010402	0.82031	0.00046003	560.7936320278119	72.468	0.40555	74.278	74.042	74.448	1.8101					23	12	2	0	0	0	0.040497	1	30398	30398		75.761	45.536	1	2785900			26467	3250	13069	13124	30325	30325					0.0203123482826868
PWLVFCLL	8	Unmodified	_PWLVFCLL_					0	0	0			REV__ENST00000469071.1_1_1:156765627-156765813:+|nuORF	REV__ENST00000469071.1_1_1:156765627-156765813:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	495.2758361697197	2	495.777699	989.540846	2.7882	0.0013823	-0.81225	-0.00040269	1.976	0.00097966	495.77744335555906	82.025	0.24583	82.305	82.182	82.428	0.2802					11	7	2	0	0	0	2.3239	1	34282	34282		11.114	0	1	1923500	+		26468	13265	13070	13125	30326	30326					0.045656954158062035
PWPAGFAR	8	Unmodified	_PWPAGFAR_					0	0	0		ENST00000491730.5_1_3:113251655-113300327:+|nuORF	ENST00000491730.5_1_3:113251655-113300327:+|nuORF	ENST00000491730.5_1_3:113251655-113300327:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1610595583916	3	301.160817	900.460622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.862	1	34.159	33.659	34.659	0.29701								0	0	0	1.0178	1	14219	14219		0.45834	0	1				26469	6913	13071	13126	30327	30327					0.00640970136987562
PWPTLLKNWQL	11	Unmodified	_PWPTLLKNWQL_					0	0	0		nc|ENSG00000142273|Q9ULV8-2|CBLC;CBLC|p.S400Vfs*55|1|0.93|ENSG00000142273|chr19:44793534-44793534|A/-|frameshift_variant;ENSG00000142273|ENST00000647358|CBLC	nc|ENSG00000142273|Q9ULV8-2|CBLC	nc|ENSG00000142273|Q9ULV8-2|CBLC	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.3939697146416	2	698.392805	1394.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.4	1	100.47	99.972	100.97	0.072716								0	0	0	0.63775	1	42034	42034		1.3295	0.13619	1				26470	123	13072	13127	30328	30328					0.08946200282321115
PWSCWFSL	8	Unmodified	_PWSCWFSL_					0	0	0		ENST00000373044.2_1_1:38269292-38269487:-|nuORF	ENST00000373044.2_1_1:38269292-38269487:-|nuORF	ENST00000373044.2_1_1:38269292-38269487:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2316161990166	2	513.231113	1024.44767	3.1898	0.0016371	-1.6277	-0.00083541	1.5621	0.00080171	513.2304568356395	80.863	0.42593	82.096	81.953	82.378	1.2332					34	13	4	0	0	0	0.86202	1	33946	33946		15.768	0	1	3633700			26471	6151	13073	13128	30329	30329					-0.063572290374168
PWSCWFSL	8	Unmodified	_PWSCWFSL_					0	0	0		ENST00000373044.2_1_1:38269292-38269487:-|nuORF	ENST00000373044.2_1_1:38269292-38269487:-|nuORF	ENST00000373044.2_1_1:38269292-38269487:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2325927615166	2	513.231113	1024.44767	1.9241	0.00098752	0.025472	1.3073E-05	1.9496	0.0010006	513.2310225355599	80.43	0.48299	82.147	82.025	82.508	1.7167					29	15	4	0	0	0	0.86202	1	33728	33728		15.768	3.2367	1	2429900			26472	6151	13073	13128	30330	30330					-0.063572290374168
PWVLGLLSL	9	Unmodified	_PWVLGLLSL_					0	0	0		ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	ENSG00000188886|ENST00000342380|ASTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3088867068291	2	499.307678	996.600803	1.3712	0.00068465	0.67114	0.0003351	2.0423	0.0010198	499.30686108661723	48.836	0.43129	50.224	49.925	50.357	1.388					19	13	2	0	0	0	0.44512	1	20453	20453		19.439	0	1	1355600			26473	4883	13074	13129	30331	30331					0.102367093507155
PWWYRFAHK	9	Unmodified	_PWWYRFAHK_					0	0	0		nc|ENSG00000169432|Q15858-4|SCN9A;nc|ENSG00000169432|Q15858-3|SCN9A;nc|ENSG00000169432|Q15858-2|SCN9A;ENSG00000169432|ENST00000642356|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	nc|ENSG00000169432|Q15858-4|SCN9A	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.96	1	18.96	18.46	19.46	0								0	0	0	0.42693	1	7879	7879		0.96228	0	1				26474	4091	13075	13130	30332	30332					0.0125595293659444
PYASDIYIL	9	Unmodified	_PYASDIYIL_					0	0	0			REV__nc|ENSG00000136828|Q5JS13-4|RALGPS1	REV__nc|ENSG00000136828|Q5JS13-4|RALGPS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.548144519329	1	1054.54554	1053.53826	3.5392	0.0037322	-0.70091	-0.00073914	2.8383	0.0029931	1054.5455490920438	69.897	0.66826	71.735	71.436	72.104	1.8378					36	20	2	0	0	0	0.11478	1	29264	29264		44.407	0	1	4724100	+		26475	9994	13076	13131	30333	30333					0.01363518491848481
PYEGGFFLF	9	Unmodified	_PYEGGFFLF_					0	0	0		ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z;ENSG00000159202|ENST00000360943|UBE2Z	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7612792849541	2	538.758018	1075.50148	4.32	0.0023274	0.027555	1.4845E-05	4.3475	0.0023423	538.758292859691	92.606	0.26158	93.542	93.408	93.67	0.93624					10	7	2	0	0	0	0.44535	1	38995	38995		18.135	4.6271	1	503330			26476	3518	13077	13132	30334	30334					-0.03324733334056873
PYEGGFFLF	9	Unmodified	_PYEGGFFLF_					0	0	0		ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z;ENSG00000159202|ENST00000360943|UBE2Z	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1076.513598620892	1	1076.50876	1075.50148	4.3264	0.0046574	1.6228	0.0017469	5.9491	0.0064043	1076.5086817242743	92.609	0.29465	93.545	93.342	93.637	0.93623					18	8	3	0	0	0	0.076627	1	39003	39003		57.471	25.354	1	1922200			26477	3518	13077	13132	30335	30335					-0.03324733334056873
PYEGGFFLF	9	Unmodified	_PYEGGFFLF_					0	0	0		ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z;ENSG00000159202|ENST00000360943|UBE2Z	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1076.518481433392	1	1076.50876	1075.50148	3.5642	0.0038369	3.4784	0.0037445	7.0426	0.0075814	1076.5146986743277	92.175	0.38884	93.502	93.277	93.666	1.3269					18	11	3	0	0	0	0.10294	2	38768	38768;38816		48.346	25.61	1	2021900			26478	3518	13077	13132	30336;30337	30336					-0.03324733334056873
PYEGGFFLF	9	Unmodified	_PYEGGFFLF_					0	0	0		ENST00000513342.5_1_17:46990150-47004493:+|nuORF;nc|ENSG00000159202|Q9H832-2|UBE2Z;ENSG00000159202|ENST00000360943|UBE2Z	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	ENST00000513342.5_1_17:46990150-47004493:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	538.758018	1075.50148	3.3846	0.0018235	1.7843	0.00096132	5.1689	0.0027848	538.7590182276301	92.226	0.22752	93.553	93.341	93.568	1.3269	0.0053599	0.0011844	NaN	18.135	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781830			26479	3518	13077	13132							-0.03324733334056873
PYFNAPVYL	9	Unmodified	_PYFNAPVYL_					0	0	0		nc|ENSG00000109534|Q9NY12-2|GAR1;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;ENSG00000109534|ENST00000226796|GAR1	nc|ENSG00000109534|Q9NY12-2|GAR1	nc|ENSG00000109534|Q9NY12-2|GAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2795898318291	2	542.279118	1082.54368	2.059	0.0011165	0.03598	1.9511E-05	2.095	0.0011361	542.2787602745793	71.998	0.31396	73.339	73.216	73.53	1.3415					22	9	3	0	0	0	0.04206	1	30232	30232		74.396	48.055	1	3002600			26480	1668	13078	13133	30338	30338					0.0057124207430661045
PYFNAPVYL	9	Unmodified	_PYFNAPVYL_					0	0	0		nc|ENSG00000109534|Q9NY12-2|GAR1;ENST00000503671.2_1_4:110737056-110740318:+|nuORF;ENST00000506840.5_1_4:110736915-110743667:+|nuORF;ENSG00000109534|ENST00000226796|GAR1	nc|ENSG00000109534|Q9NY12-2|GAR1	nc|ENSG00000109534|Q9NY12-2|GAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2795898318291	2	542.279118	1082.54368	2.0223	0.0010967	-0.87625	-0.00047517	1.1461	0.0006215	542.2780125916447	71.573	0.44279	73.397	73.191	73.634	1.824					30	13	3	0	0	0	0.04206	2	29998	29998;30045		74.396	53.525	1	2855400			26481	1668	13078	13133	30339;30340	30339					0.0057124207430661045
PYFYAPELL	9	Unmodified	_PYFYAPELL_					0	0	0		CON__P02769;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.7882568240166	2	556.786776	1111.559	2.8254	0.0015731	-0.10019	-5.5783E-05	2.7252	0.0015174	556.786283799359	81.122	0.34423	82.818	82.578	82.923	1.6959					22	10	3	0	0	0	0.24585	1	33976	33976		28.173	18.826	1	1776200		+	26482	341;340	13079	13134	30341	30341					0.007681088715116857
PYFYAPELL	9	Unmodified	_PYFYAPELL_					0	0	0		CON__P02769;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1112.571582019329	1	1112.56627	1111.559	2.861	0.0031831	-2.594	-0.002886	0.26698	0.00029704	1112.5645593746135	81.071	0.25135	82.767	82.64	82.892	1.6959					14	7	2	0	0	0	0.13437	1	33999	33999		40.449	21.01	1	1753200		+	26483	341;340	13079	13134	30342	30342					0.007681088715116857
PYFYAPELL	9	Unmodified	_PYFYAPELL_					0	0	0		CON__P02769;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1112.56627	1111.559	3.1121	0.0034625	-3.374	-0.0037538	-0.26189	-0.00029137	1112.5622459058038	81.531	0.3411	82.764	82.595	82.936	1.2332	-0.0015229	-0.00018475	NaN	40.449	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1522500		+	26484	341;340	13079	13134							0.007681088715116857
PYFYAPELL	9	Unmodified	_PYFYAPELL_					0	0	0		CON__P02769;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	556.786776	1111.559	3.4032	0.0018949	-2.6152	-0.0014561	0.78802	0.00043876	556.7845894505504	81.469	0.43278	82.702	82.471	82.904	1.2332	-0.057979	-0.0017194	NaN	28.173	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1881100		+	26485	341;340	13079	13134							0.007681088715116857
PYGKAAFA	8	Unmodified	_PYGKAAFA_					0	0	0			REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7191345095634	2	412.718696	823.422839	0.41681	0.00017203	0.40007	0.00016512	0.81688	0.00033714	412.7188371442559	37.862	1.0507	37.862	37.081	38.132	0					60	42	3	0	0	0	0.87803	5	15761	15761;15811;15863;15915;15961		10.183	4.423	1	2833500	+		26486	12769	13080	13135	30343;30344;30345;30346;30347	30343					0.004064591515088978
PYGKAAFA	8	Unmodified	_PYGKAAFA_					0	0	0			REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.718696	823.422839	0.41681	0.00017203	0.40007	0.00016512	0.81688	0.00033714	412.7188371442559	37.862	1.0507	37.862	37.081	38.132	0	0.070293	0.00020022	NaN	10.183	60	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2833500	+		26487	12769	13080	13135							0.004064591515088978
PYGKAAFA	8	Unmodified	_PYGKAAFA_					0	0	0			REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	REV__ENST00000381103.6_1_5:61681328-61681442:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	412.718696	823.422839	1.7312	0.0007145	-1.0187	-0.00042043	0.71252	0.00029407	412.7186852560373	37.417	0.15519	37.722	37.67	37.825	0.30497	-0.070293	-0.00097087	NaN	10.183	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	538990	+		26488	12769	13080	13135							0.004064591515088978
PYGKMKAFI	9	Unmodified	_PYGKMKAFI_					0	0	0			REV__ENSG00000164985|ENST00000380733|PSIP1	REV__ENSG00000164985|ENST00000380733|PSIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	352.3407775759697	3	352.196651	1053.56812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.802	1	83.019	82.519	83.519	1.2173								0	0	0	0.42693	1	34342	34342		1.1933	0.49568	1		+		26489	10760	13081	13136	30348	30348					0.04348178956206539
PYIIHTVLY	9	Unmodified	_PYIIHTVLY_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8182250857353	2	559.815867	1117.61718	0.98769	0.00055292	0.86898	0.00048647	1.8567	0.0010394	559.8161594060305	52.727	0.23827	54.699	54.545	54.783	1.9722					12	8	2	0	0	0	0.070759	1	22079	22079		59.795	33.454	1	1385200			26490	2336	13082	13137	30349	30349					0.06307790516802925
PYILIMLGL	9	Unmodified	_PYILIMLGL_					0	0	0		ENST00000566157.5_1_16:56511116-56511164:+|nuORF	ENST00000566157.5_1_16:56511116-56511164:+|nuORF	ENST00000566157.5_1_16:56511116-56511164:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.8134033083916	2	516.811739	1031.60893	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.594	1	91.96	91.46	92.46	1.366								0	0	0	0.39421	1	38155	38155		9.3474	0	1				26491	7359	13083	13138	30350	30350					0.09438520275830342
PYISNIYLI	9	Unmodified	_PYISNIYLI_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3098022341728	2	548.307875	1094.6012	2.4869	0.0013636	1.2967	0.00071101	3.7836	0.0020746	548.3080751001681	78.757	0.40688	80.024	79.817	80.224	1.2668					38	12	4	0	0	0	0.029093	2	33074	33035;33074		88.904	34.502	1	4676200			26492	1040	13084	13139	30351;30352	30352					0.05768084279884533
PYISNIYLI	9	Unmodified	_PYISNIYLI_					0	0	0		ENSG00000083444|ENST00000196061|PLOD1;nc|ENSG00000083444|Q02809-2|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	ENSG00000083444|ENST00000196061|PLOD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3096191287041	2	548.307875	1094.6012	1.9994	0.0010963	1.0211	0.00055985	3.0205	0.0016562	548.3081890996204	78.24	0.43558	79.975	79.761	80.196	1.735					36	13	4	0	0	0	0.022807	1	32801	32801		97.075	11.718	1	5552100			26493	1040	13084	13139	30353	30353					0.05768084279884533
PYKLKRRTKA	10	Unmodified	_PYKLKRRTKA_					0	0	0		tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	tr|A0A553SGU0|A0A553SGU0_NIACIRNA-bindingtranscriptionalaccessoryproteinOS=NialliacirculansOX=1397GN=CEQ21_11540PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	630.3970214724541	2	630.898589	1259.78262	1.5278	0.0009639	1.2078	0.00076199	2.7356	0.0017259	630.8998117468046	107.44	0.12152	107.44	107.35	107.47	0					7	5	2	0	0	0	0.12555	1	46000	46000		1.6526	0	1	2628300			26494	16122	13085	13140	30354	30354					0.1631244209631859
PYKRLMLL	8	Unmodified	_PYKRLMLL_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.8139526247978	2	517.31498	1032.61541	4.3476	0.0022491	0.76365	0.00039505	5.1113	0.0026441	517.3162724510103	91.032	0.31917	92.014	91.846	92.165	0.98157					13	9	2	0	0	0	2.3239	1	38316	38316		11.114	0	1	691400			26495	4996	13086	13141	30355	30355					0.10040458227194904
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.6230346560478	3	517.620788	1549.84053	2.2262	0.0011523	0.69651	0.00036053	2.9227	0.0015129	517.621496542234	47.577	5.934	47.577	46.321	52.255	0					517	190	6	0	0	0	0.84637	20	20508	19809;19854;19893;19932;19971;20009;20046;20086;20124;20164;20249;20308;20354;20392;20444;20508;20561;20626;20671;20712		7.0371	5.8223	1	101400000			26496	1998	13087	13142	30356;30357;30358;30359;30360;30361;30362;30363;30364;30365;30366;30367;30368;30369;30370;30371;30372;30373;30374;30375	30371					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	775.9291869997978	2	775.927543	1549.84053	2.0744	0.0016095	-0.097425	-7.5595E-05	1.9769	0.001534	775.9280686603834	47.595	0.65784	47.595	47.403	48.061	0					44	20	4	0	0	0	0.97491	2	19872	19872;19921		5.2969	2.3016	1	2441000			26497	1998	13087	13142	30376;30377	30376					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6224243044853	3	517.620788	1549.84053	1.9058	0.00098649	1.5065	0.00077981	3.4124	0.0017663	517.6221293879064	47.177	4.8522	47.508	46.848	51.7	0.33034					537	158	6	0	0	0	0.90709	27	19888	19660;19699;19888;19936;19974;20012;20058;20141;20181;20230;20277;20328;20367;20417;20469;20522;20575;20623;20669;20718;20773;20820;20872;21177;21223;21270;21363		4.7159	3.5011	1	123180000			26498	1998	13087	13142	30378;30379;30380;30381;30382;30383;30384;30385;30386;30387;30388;30389;30390;30391;30392;30393;30394;30395;30396;30397;30398;30399;30400;30401;30402;30403;30404	30380					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6224243044853	3	517.620788	1549.84053	2.2415	0.0011603	0.74879	0.00038759	2.9903	0.0015479	517.6214456035781	45.632	1.1112	47.007	46.098	47.209	1.3751					100	34	6	0	0	0	0.90709	5	19155	19033;19077;19116;19155;19197		4.7159	1.9714	1	133340000			26499	1998	13087	13142	30405;30406;30407;30408;30409	30408					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6238891482353	3	517.620788	1549.84053	2.0105	0.0010407	2.1026	0.0010884	4.1131	0.002129	517.6225772536741	46.113	4.0988	47.488	47.209	51.308	1.3751					371	130	5	0	0	0	0.90709	19	19734	19250;19301;19380;19434;19482;19535;19576;19628;19679;19734;19784;19835;20047;20095;20219;20329;20619;20674;20817		4.7159	3.9516	1	14667000			26500	1998	13087	13142	30410;30411;30412;30413;30414;30415;30416;30417;30418;30419;30420;30421;30422;30423;30424;30425;30426;30427;30428	30419					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6223022341728	3	517.620788	1549.84053	1.8949	0.00098084	0.87462	0.00045272	2.7695	0.0014336	517.621592590166	45.077	0.75646	47.037	46.608	47.364	1.9596					92	23	6	0	0	0	0.91768	3	18954	18865;18954;18994		4.4062	1.9714	1	104140000			26501	1998	13087	13142	30429;30430;30431	30430					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	775.9294921755791	2	775.927543	1549.84053	1.3228	0.0010264	-0.091405	-7.0923E-05	1.2314	0.00095545	775.9285312509506	45.112	0.37533	47.072	46.863	47.239	1.9596					33	11	4	0	0	0	0.97491	2	18881	18881;18932		5.2969	0	1	1788800			26502	1998	13087	13142	30432;30433	30432					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6217529177666	3	517.620788	1549.84053	1.8454	0.00095521	2.3285	0.0012053	4.1739	0.0021605	517.6227962933076	45.679	4.9601	47.65	47.343	52.303	1.9703					374	159	5	0	0	0	0.90709	20	19255	19036;19089;19203;19255;19351;19401;19515;19565;19616;19668;19719;19790;19840;20021;20075;20139;20225;20635;20712;20957		4.7159	3.2964	1	11964000			26503	1998	13087	13142	30434;30435;30436;30437;30438;30439;30440;30441;30442;30443;30444;30445;30446;30447;30448;30449;30450;30451;30452;30453	30437					0.08760659231052159
PYKYKLRYRYT	11	Unmodified	_PYKYKLRYRYT_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B;KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6208373904228	3	517.620788	1549.84053	0.61998	0.00032092	3.9853	0.0020629	4.6052	0.0023838	517.6233391650732	50.45	0.78001	52.425	52.277	53.057	1.9753					41	26	2	0	0	0	1.0357	1	21142	21142		0.50596	0	1	3529100			26504	1998	13087	13142	30454	30454					0.08760659231052159
PYLAKFKVKR	10	Unmodified	_PYLAKFKVKR_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000486209.5_1_22:21832732-21838406:-|nuORF;ENST00000492581.5_1_22:21067427-21075805:-|nuORF;ENST00000450651.5_1_22:21830386-21841179:-|nuORF;ENST00000466772.5_1_22:21065465-21081626:-|nuORF;ENST00000463608.5_1_22:21830433-21838406:-|nuORF;nc|ENSG00000183506|A4QPH2-2|PI4KAP2;ENST00000462560.6_1_22:21830876-21842641:-|nuORF;ENST00000467443.5_1_22:21831964-21846319:-|nuORF;nc|ENSG00000183506|A4QPH2-4|PI4KAP2;nc|ENSG00000183506|A4QPH2|PI4KAP2;ENST00000360806.9_2_22:21827645-21842641:-|nuORF;nc|ENSG00000241973|P42356-2|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MSMS	GG20161007_CRH_Patient100_A02_01	1	625.3903076052666	2	625.392608	1248.77066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.27	1	108.27	107.77	108.77	0								0	0	0	0.66237	1	46616	46616		0.45834	0	1				26505	5341	13088	13143	30455	30455					0.15622825353125336
PYLDKFFAL	9	Unmodified	_PYLDKFFAL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3041259646416	2	557.302593	1112.59063	3.4374	0.0019157	0.27097	0.00015101	3.7084	0.0020667	557.30257904123	74.102	0.52653	75.42	75.154	75.681	1.318					45	16	4	0	0	0	0.03071	3	31097	31051;31097;31140		86.332	50.205	1	11405000			26506	1975	13089	13144	30456;30457;30458	30457					0.03884101625476433
PYLDKFFAL	9	Unmodified	_PYLDKFFAL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3033935427666	2	557.302593	1112.59063	2.7502	0.0015327	0.19165	0.00010681	2.9418	0.0016395	557.3025108200465	73.57	0.49496	75.366	75.132	75.627	1.7962					44	15	4	0	0	0	0.03071	3	30828	30828;30874;30915		86.332	31.655	1	10332000			26507	1975	13089	13144	30459;30460;30461	30459					0.03884101625476433
PYLDKFFTL	9	Unmodified	_PYLDKFFTL_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3098022341728	2	572.307875	1142.6012	3.4213	0.001958	-0.55323	-0.00031662	2.868	0.0016414	572.3075308619127	74.162	0.49227	75.48	75.218	75.711	1.318					49	15	5	0	0	0	0.00023236	2	31110	31066;31110		140.63	59.02	1	16692000			26508	2417	13090	13145	30462;30463	30463					0.0356008427991128
PYLDKFFTL	9	Unmodified	_PYLDKFFTL_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3092529177666	2	572.307875	1142.6012	2.87	0.0016425	-0.56704	-0.00032452	2.303	0.001318	572.3073377311863	73.66	0.55417	75.456	75.163	75.717	1.7962					54	17	5	0	0	0	0.0051116	3	30873	30832;30873;30912		121.53	50.4	1	13482000			26509	2417	13090	13145	30464;30465;30466	30465					0.0356008427991128
PYLDSFYEY	9	Unmodified	_PYLDSFYEY_					0	0	0		ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	598.2940551638603	2	598.760955	1195.50736	2.9269	0.0017525	-2.8566	-0.0017104	0.070357	4.2127E-05	598.7591644985155	64.222	0.40012	65.629	65.401	65.801	1.4071					24	12	3	0	0	0	0.029304	1	26915	26915		57.471	30.588	1	4224200			26510	5326	13091	13146	30467	30467					-0.08257679613029723
PYLDSFYEY	9	Unmodified	_PYLDSFYEY_					0	0	0		ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1196.517626941204	1	1196.51463	1195.50736	2.2337	0.0026726	0.015965	1.9102E-05	2.2497	0.0026917	1196.5151702550093	63.716	0.30666	65.644	65.489	65.795	1.928					21	9	3	0	0	0	0.09539	1	26748	26748		50.855	37.347	1	1334300			26511	5326	13091	13146	30468	30468					-0.08257679613029723
PYLDSFYEY	9	Unmodified	_PYLDSFYEY_					0	0	0		ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	598.2936279177666	2	598.760955	1195.50736	2.9455	0.0017636	-0.12791	-7.659E-05	2.8175	0.001687	598.7595581596062	63.759	0.40064	65.687	65.457	65.857	1.928					20	12	2	0	0	0	0.032748	1	26729	26729		53.576	41.935	1	3154000			26512	5326	13091	13146	30469	30469					-0.08257679613029723
PYLDSFYEY	9	Unmodified	_PYLDSFYEY_					0	0	0		ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	ENSG00000239305|ENST00000237455|RNF103	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1196.51463	1195.50736	2.4844	0.0029726	-0.17292	-0.0002069	2.3115	0.0027657	1196.5156769495309	64.281	0.30435	65.688	65.466	65.77	1.4071	0.021878	-0.00013953	NaN	50.855	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1705100			26513	5326	13091	13146							-0.08257679613029723
PYLFHVVTF	9	Unmodified	_PYLFHVVTF_					0	0	0		ENSG00000196712|ENST00000358273|NF1;nc|ENSG00000196712|P21359-6|NF1;nc|ENSG00000196712|P21359-2|NF1;ENST00000579081.5_2_17:29626598-29701170:+|nuORF	ENSG00000196712|ENST00000358273|NF1	ENSG00000196712|ENST00000358273|NF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8051635622978	2	561.80276	1121.59097	2.7439	0.0015416	3.8496	0.0021627	6.5936	0.0037043	561.8038185454333	69.882	0.28947	71.72	71.624	71.914	1.8378					15	8	2	0	0	0	2.2613E-05	2	29340	29303;29340		170.4	96.001	1	7842100			26514	4961	13092	13147	30470;30471	30471					0.035035213453284086
PYLIKRGK	8	Unmodified	_PYLIKRGK_					0	0	0			REV__tr|A0A7D6VND6|A0A7D6VND6_9CLOTFMN-bindingglutamatesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17415PE=3SV=1	REV__tr|A0A7D6VND6|A0A7D6VND6_9CLOTFMN-bindingglutamatesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17415PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.9607421755791	2	487.810919	973.607286	5.7569	0.0028083	-3.4943	-0.0017046	2.2626	0.0011037	487.80879006248944	88.425	0.41904	89.482	89.272	89.691	1.0562					27	12	3	0	0	0	2.3239	1	37200	37200		2.8892	0	1	2440100	+		26515	15332	13093	13148	30472	30472					0.11942647302078058
PYLSEVLTF	9	Unmodified	_PYLSEVLTF_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7853271365166	2	534.784233	1067.55391	3.405	0.001821	-1.0569	-0.00056524	2.3481	0.0012557	534.783742681334	81.342	0.46375	82.576	82.348	82.811	1.2332					39	14	3	0	0	0	0.028763	2	34117	34117;34168		89.427	47.332	1	5385200			26516	4941	13094	13149	30473;30474	30473					0.02283805008892159
PYLSEVLTF	9	Unmodified	_PYLSEVLTF_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000559588.5_1_14:24652221-24657802:-|nuORF;ENST00000558780.5_2_14:24651254-24657791:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7856933474541	2	534.784233	1067.55391	2.7411	0.0014659	-0.72986	-0.00039032	2.0112	0.0010756	534.7838356357845	80.892	0.46568	82.588	82.394	82.86	1.6959					36	14	3	0	0	0	0.046276	2	33931	33931;33984		70.716	42.229	1	3779800			26517	4941	13094	13149	30475;30476	30475					0.02283805008892159
PYLYTLRNS	9	Unmodified	_PYLYTLRNS_					0	0	0		PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion;PPP1CB-PLB1|1|fusion;PPP1CB-PLB1|2|fusion;nc|ENSG00000163803|Q6P1J6-5|PLB1;nc|ENSG00000163803|Q6P1J6-3|PLB1;ENSG00000163803|ENST00000327757|PLB1	PPP1CB-PLB1|3|fusion	PPP1CB-PLB1|3|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2019836306572	3	376.201229	1125.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.743	1	67.142	66.642	67.642	1.3989								0	0	0	0.42693	1	27574	27574		2.4985	0.41248	1				26518	8062	13095	13150	30477	30477					0.024091279889944417
PYMAKFVVF	9	Oxidation (M)	_PYM(Oxidation (M))AKFVVF_		PYM(1)AKFVVF		PYM(51)AKFVVF	0	0	1		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000145362|Q01484-2|ANK2;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2919799685478	2	559.291171	1116.56779	1.7576	0.000983	0.37492	0.00020969	2.1325	0.0011927	559.2916894530647	54.478	0.32017	55.883	55.707	56.027	1.4048					21	9	3	0	0	0	0.09539	1	22811	22811		50.855	22.368	1	1965300			26519	3278;3107	13096	13151	30478	30478		55			0.014167592363264703
PYMAKFVVF	9	Oxidation (M)	_PYM(Oxidation (M))AKFVVF_		PYM(1)AKFVVF		PYM(44)AKFVVF	0	0	1		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000145362|Q01484-2|ANK2;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2903930544853	2	559.291171	1116.56779	1.475	0.00082498	-0.96186	-0.00053796	0.51318	0.00028702	559.2902842517226	53.991	0.34447	55.961	55.784	56.128	1.9694					25	10	3	0	0	0	0.11478	1	22598	22598		44.407	17.523	1	1400500			26520	3278;3107	13096	13151	30479	30479		55			0.014167592363264703
PYMAKFVVF	9	Unmodified	_PYMAKFVVF_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000145362|Q01484-2|ANK2;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2982055544853	2	551.293714	1100.57287	2.8896	0.001593	-1.1921	-0.00065718	1.6975	0.00093582	551.2933302620878	64.371	0.55041	65.778	65.497	66.047	1.4071					54	17	5	0	0	0	0.3154	1	26957	26957		24.674	5.2349	1	8662800			26521	3278;3107	13096	13152	30480	30480					0.026610630989580386
PYMAKFVVF	9	Unmodified	_PYMAKFVVF_					0	0	0		nc|ENSG00000151150|Q12955-5|ANK3;nc|ENSG00000151150|Q12955-4|ANK3;ENSG00000151150|ENST00000280772|ANK3;nc|ENSG00000151150|Q12955-7|ANK3;nc|ENSG00000151150|Q12955-6|ANK3;nc|ENSG00000145362|Q01484-5|ANK2;nc|ENSG00000145362|Q01484-2|ANK2;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3;ENSG00000145362|ENST00000357077|ANK2	nc|ENSG00000151150|Q12955-5|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.2938720583916	2	551.293714	1100.57287	2.8684	0.0015813	-1.3827	-0.00076228	1.4857	0.00081906	551.2934320379205	63.828	0.46281	65.756	65.457	65.919	1.928					49	14	5	0	0	0	0.045797	1	26760	26760		71.134	45.734	1	11130000			26522	3278;3107	13096	13152	30481	30481					0.026610630989580386
PYMDSPQSIGF	11	Oxidation (M)	_PYM(Oxidation (M))DSPQSIGF_		PYM(1)DSPQSIGF		PYM(66)DSPQSIGF	0	0	1		ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.2771484255791	2	629.276446	1256.53834	1.3663	0.00085976	-0.31181	-0.00019622	1.0545	0.00066355	629.2766986105627	46.296	0.49563	47.671	47.398	47.893	1.3751					39	15	3	0	0	0	0.05109	2	19356	19356;19409		66.457	54.816	1	2927000			26523	2099	13097	13153	30482;30483	30482		40			-0.07966849570470913
PYMDSPQSIGF	11	Oxidation (M)	_PYM(Oxidation (M))DSPQSIGF_		PYM(1)DSPQSIGF		PYM(66)DSPQSIGF	0	0	1		ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.2770873904228	2	629.276446	1256.53834	0.79466	0.00050006	0.54757	0.00034457	1.3422	0.00084464	629.2769253784838	45.902	0.49667	47.872	47.567	48.064	1.9703					36	15	3	0	0	0	0.05109	2	19218	19168;19218		66.457	53.414	1	2172600			26524	2099	13097	13153	30484;30485	30485		40			-0.07966849570470913
PYMDSPQSIGF	11	Unmodified	_PYMDSPQSIGF_					0	0	0		ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.2792846560478	2	621.278989	1240.54342	0.4221	0.00026224	-0.58983	-0.00036645	-0.16772	-0.0001042	621.2789428669456	58.319	0.50053	59.737	59.44	59.941	1.4181					43	16	4	0	0	0	0.0021387	3	24480	24382;24428;24480		137.42	94.261	1	36923000			26525	2099	13097	13154	30486;30487;30488	30488					-0.06722545707862082
PYMDSPQSIGF	11	Unmodified	_PYMDSPQSIGF_					0	0	0		ENSG00000120265|ENST00000464889|PCMT1;nc|ENSG00000120265|P22061-2|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	ENSG00000120265|ENST00000464889|PCMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2787963747978	2	621.278989	1240.54342	0.010313	6.4075E-06	-0.61107	-0.00037964	-0.60076	-0.00037324	621.2787564363081	57.746	0.46857	59.715	59.554	60.023	1.969					52	16	4	0	0	0	0.0021387	4	24274	24179;24224;24274;24333		125.53	87.354	1	24026000			26526	2099	13097	13154	30489;30490;30491;30492	30491					-0.06722545707862082
PYMHEVTHFC	10	Unmodified	_PYMHEVTHFC_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.2709838747978	2	632.267901	1262.52125	0.44436	0.00028095	2.9296	0.0018523	3.3739	0.0021332	632.2701303766339	58.259	0.3606	59.677	59.548	59.909	1.4181					18	11	2	0	0	0	0.20516	1	24436	24436		48.346	26.599	1	3732100			26527	770	13098	13155	30493	30493					-0.0995104865723988
PYMHEVTHFC	10	Unmodified	_PYMHEVTHFC_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.2681762576103	2	632.267901	1262.52125	-0.030308	-1.9163E-05	2.9095	0.0018396	2.8792	0.0018204	632.2700197581964	57.757	0.3087	59.726	59.654	59.962	1.969					19	10	3	0	0	0	0.28892	1	24230	24230		39.957	10.876	1	3515300			26528	770	13098	13155	30494	30494					-0.0995104865723988
PYMPYEFTCE	10	Unmodified	_PYMPYEFTCE_					0	0	0		ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	ENSG00000152127|ENST00000281923|MGAT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	427.5057556033134	3	427.171842	1278.4937	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.826	1	59.795	59.295	60.295	1.969								0	0	0	0.65584	1	24256	24256		8.9762	0.22446	1				26529	3312	13099	13156	30495	30495					-0.1344099670814103
PYMRCPLHR	9	Unmodified	_PYMRCPLHR_					0	0	0			REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	REV__ENST00000534488.5_1_11:66204578-66204701:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	392.1138183474541	3	391.532039	1171.57429	4.4723	0.001751	3.2226	0.0012617	7.6948	0.0030128	391.5332443018958	87.225	0.36919	88.72	88.55	88.919	1.4953					20	11	2	0	0	0	0.11898	1	36752	36752		1.1933	0	1	814000	+		26530	13730	13100	13157	30496	30496					-0.004636260839561146
PYNDYFEYF	9	Unmodified	_PYNDYFEYF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.2605468630791	2	629.258579	1256.50261	2.621	0.0016493	-0.37411	-0.00023541	2.2469	0.0014139	629.2582946609012	75.035	0.52629	76.342	76.12	76.646	1.3063					63	16	5	0	0	0	0.007852	4	31499	31457;31499;31541;31595		111.29	85.019	1	26826000			26531	1970;4951	13101	13158	30497;30498;30499;30500	30498					-0.11538563755811992
PYNDYFEYF	9	Unmodified	_PYNDYFEYF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1257.514453113079	1	1257.50988	1256.50261	2.4681	0.0031036	-0.28325	-0.00035619	2.1848	0.0027474	1257.5086005853407	75.053	0.3402	76.359	76.214	76.555	1.3063					24	10	3	0	0	0	0.037761	2	31507	31507;31559		78.149	51.266	1	3235100			26532	1970;4951	13101	13158	30501;30502	30501					-0.11538563755811992
PYNDYFEYF	9	Unmodified	_PYNDYFEYF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.2601196169853	2	629.258579	1256.50261	2.3548	0.0014818	-0.086223	-5.4257E-05	2.2686	0.0014275	629.2584859295041	74.684	0.59947	76.466	76.131	76.73	1.7817					56	18	5	0	0	0	0.0044745	3	31304	31259;31304;31354		123.45	85.275	1	26207000			26533	1970;4951	13101	13158	30503;30504;30505	30504					-0.11538563755811992
PYNDYFEYF	9	Unmodified	_PYNDYFEYF_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1257.513354480267	1	1257.50988	1256.50261	1.7212	0.0021644	-0.48743	-0.00061295	1.2337	0.0015514	1257.508722882708	74.624	0.28311	76.405	76.292	76.575	1.7817					19	8	3	0	0	0	0.029093	1	31308	31308		88.904	67.367	1	3276500			26534	1970;4951	13101	13158	30506	30506					-0.11538563755811992
PYNPILGETF	10	Unmodified	_PYNPILGETF_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5;ENST00000548535.1_1_12:76779917-76783618:-|nuORF;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;ENSG00000091039|ENST00000261183|OSBPL8	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7955810427666	2	575.792589	1149.57063	2.9801	0.0017159	-0.37148	-0.00021389	2.6086	0.001502	575.7921209264576	65.061	0.53325	66.46	66.255	66.788	1.3989					34	16	3	0	0	0	0.15278	1	27285	27285		54.774	0	1	2553200			26535	613	13102	13159	30507	30507					0.0018230589482755022
PYNPILGETF	10	Unmodified	_PYNPILGETF_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5;ENST00000548535.1_1_12:76779917-76783618:-|nuORF;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;ENSG00000091039|ENST00000261183|OSBPL8	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7947875857353	2	575.792589	1149.57063	2.1181	0.0012196	0.34178	0.0001968	2.4599	0.0014164	575.7938486562904	68.494	0.96101	69.86	69.512	70.473	1.3666					77	30	4	0	0	0	0.052963	2	28667	28667;28720		88.954	0	1	7079200			26536	613	13102	13159	30508;30509	30508					0.0018230589482755022
PYNPILGETF	10	Unmodified	_PYNPILGETF_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5;ENST00000548535.1_1_12:76779917-76783618:-|nuORF;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;ENSG00000091039|ENST00000261183|OSBPL8	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7937499880791	2	575.792589	1149.57063	2.0994	0.0012088	0.26148	0.00015056	2.3608	0.0013594	575.7925015737103	64.548	0.38354	66.476	66.294	66.678	1.928					31	11	4	0	0	0	0.24174	2	27112	27059;27112		43.858	0	1	1562300			26537	613	13102	13159	30510;30511	30511					0.0018230589482755022
PYNPILGETF	10	Unmodified	_PYNPILGETF_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5;ENST00000548535.1_1_12:76779917-76783618:-|nuORF;nc|ENSG00000091039|Q9BZF1-3|OSBPL8;nc|ENSG00000091039|Q9BZF1-2|OSBPL8;ENSG00000091039|ENST00000261183|OSBPL8	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7938110232353	2	575.792589	1149.57063	2.1651	0.0012467	-0.5012	-0.00028859	1.6639	0.00095808	576.2934796818037	67.944	1.0858	69.814	69.458	70.544	1.87					82	34	4	0	0	0	0.047799	2	28472	28421;28472		85.272	0	1	6000700			26538	613	13102	13159	30512;30513	30513					0.0018230589482755022
PYNPLWAQL	9	Unmodified	_PYNPLWAQL_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1;nc|ENSG00000217128|Q8TF40-2|FNIP1;FNIP2|p.D1024Efs*59|1|0.07|ENSG00000052795|chr4:158891567-158891568|-/AG|frameshift_variant;ENSG00000052795|ENST00000264433|FNIP2;nc|ENSG00000052795|Q9P278-2|FNIP2	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.2921020388603	2	551.290017	1100.56548	3.2464	0.0017897	2.8347	0.0015628	6.0811	0.0033525	551.2899557301067	74.182	0.49227	75.5	75.218	75.711	1.318					57	15	5	0	0	0	0.0037165	2	31122	31077;31122		125.62	65.235	1	10918000			26539	5264	13103	13160	30514;30515	30515					0.019220468228922982
PYNPLWAQL	9	Unmodified	_PYNPLWAQL_					0	0	0		nc|ENSG00000217128|Q8TF40-3|FNIP1;ENSG00000217128|ENST00000510461|FNIP1;nc|ENSG00000217128|Q8TF40-2|FNIP1;FNIP2|p.D1024Efs*59|1|0.07|ENSG00000052795|chr4:158891567-158891568|-/AG|frameshift_variant;ENSG00000052795|ENST00000264433|FNIP2;nc|ENSG00000052795|Q9P278-2|FNIP2	nc|ENSG00000217128|Q8TF40-3|FNIP1	nc|ENSG00000217128|Q8TF40-3|FNIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.2913085818291	2	551.290017	1100.56548	2.7758	0.0015303	2.899	0.0015982	5.6748	0.0031285	551.2901094239027	73.646	0.55453	75.442	75.193	75.748	1.7962					62	17	5	0	0	0	0.0037165	1	30854	30854		125.62	78.704	1	8224400			26540	5264	13103	13160	30516	30516					0.019220468228922982
PYPGVIEWSE	10	Unmodified	_PYPGVIEWSE_					0	0	0			REV__ENSG00000172292|ENST00000305747|CERS6	REV__ENSG00000172292|ENST00000305747|CERS6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.7842895388603	2	588.782222	1175.54989	1.6159	0.00095141	1.9497	0.001148	3.5656	0.0020994	588.7834922669158	34.207	0.48441	34.207	33.946	34.43	0					58	15	5	0	0	0	0.80568	1	14269	14269		11.64	0.81637	1	17809000	+		26541	11062	13104	13161	30517	30517					-0.03086284484834323
PYPLNVDI	8	Unmodified	_PYPLNVDI_					0	0	0			REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7506591677666	2	465.750193	929.485833	1.3116	0.0006109	0.61011	0.00028416	1.9218	0.00089506	465.75047904294036	23.306	0.30451	23.306	23.139	23.444	0					23	9	3	0	0	0	0.60362	1	9732	9732		39.957	1.8061	1	2951500	+		26542	15060	13105	13162	30518	30518					0.01826980148905477
PYPLNVDI	8	Unmodified	_PYPLNVDI_					0	0	0			REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7507507205009	2	465.750193	929.485833	1.4439	0.0006725	0.62471	0.00029096	2.0686	0.00096346	465.7504044670655	23.246	0.3458	23.479	23.282	23.628	0.23306					29	10	4	0	0	0	0.7528	1	9715	9715		25.399	2.2509	1	2516600	+		26543	15060	13105	13162	30519	30519					0.01826980148905477
PYPLNVDI	8	Unmodified	_PYPLNVDI_					0	0	0			REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7515441775322	2	465.750193	929.485833	1.3346	0.0006216	0.63308	0.00029486	1.9677	0.00091646	465.7504747363999	22.295	0.31473	23.472	23.321	23.635	1.177					28	9	4	0	0	0	0.67986	1	9294	9294		32.305	3.8186	1	5426600	+		26544	15060	13105	13162	30520	30520					0.01826980148905477
PYPLNVDI	8	Unmodified	_PYPLNVDI_					0	0	0			REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	REV__tr|A0A553SNR8|A0A553SNR8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_24815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7512390017509	2	465.750193	929.485833	0.80128	0.00037319	0.1848	8.6071E-05	0.98608	0.00045926	465.75029639702416	21.917	0.29643	23.532	23.377	23.674	1.6158					24	9	3	0	0	0	0.7528	1	9112	9112		25.399	2.2509	1	6161600	+		26545	15060	13105	13162	30521	30521					0.01826980148905477
PYPLVLMSI	9	Unmodified	_PYPLVLMSI_					0	0	0		ENSG00000168412|ENST00000307161|MTNR1A	ENSG00000168412|ENST00000307161|MTNR1A	ENSG00000168412|ENST00000307161|MTNR1A	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7936279177666	2	516.793546	1031.57254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.18	1	84.817	84.317	85.317	1.6379								0	0	0	0.35192	1	34891	34891		13.508	0	1				26546	4033	13106	13163	30522	30522					0.05801643379095367
PYPQYFTQL	9	Unmodified	_PYPQYFTQL_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.7896606326103	2	578.787307	1155.56006	2.7917	0.0016158	2.9532	0.0017093	5.7449	0.0033251	578.7885955874098	62.58	0.41869	63.993	63.743	64.162	1.4134					31	13	3	0	0	0	0.12251	2	26226	26226;26283		41.84	19.103	1	3804600			26547	1419	13107	13164	30523;30524	30523					-0.01149676759587237
PYPQYFTQL	9	Unmodified	_PYPQYFTQL_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.7897827029228	2	578.787307	1155.56006	2.938	0.0017005	2.7371	0.0015842	5.6751	0.0032847	578.7884609354252	62.022	0.43078	63.979	63.719	64.15	1.9571					23	13	2	0	0	0	0.079895	1	26019	26019		56.177	33.441	1	2493000			26548	1419	13107	13164	30525	30525					-0.01149676759587237
PYPTQKNTFRL	11	Unmodified	_PYPTQKNTFRL_					0	0	0		ENST00000371113.8_3_X:128724255-128724522:+|nuORF	ENST00000371113.8_3_X:128724255-128724522:+|nuORF	ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	682.8730346560478	2	682.869694	1363.72483	2.3459	0.0016019	2.6022	0.001777	4.948	0.0033789	682.8713298340414	62.661	0.55787	62.661	62.399	62.957	0					50	17	4	0	0	0	0.46674	3	26116	26067;26116;26169		24.991	8.8419	1	4476300			26549	6124	13108	13165	30526;30527;30528	30527					0.05752135380225809
PYPTQKNTFRL	11	Unmodified	_PYPTQKNTFRL_					0	0	0		ENST00000371113.8_3_X:128724255-128724522:+|nuORF	ENST00000371113.8_3_X:128724255-128724522:+|nuORF	ENST00000371113.8_3_X:128724255-128724522:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	682.8739501833916	2	682.869694	1363.72483	2.9174	0.0019922	3.6073	0.0024633	6.5247	0.0044555	682.8723846581809	60.87	0.3821	62.289	62.059	62.441	1.4196					34	11	4	0	0	0	0.46674	2	25500	25500;25550		24.991	9.7425	1	4015800			26550	6124	13108	13165	30529;30530	30529					0.05752135380225809
PYQHPKVASI	10	Unmodified	_PYQHPKVASI_					0	0	0			REV__tr|A0A553SK53|A0A553SK53_NIACIProbableGTP-bindingproteinEngBOS=NialliacirculansOX=1397GN=engBPE=3SV=1	REV__tr|A0A553SK53|A0A553SK53_NIACIProbableGTP-bindingproteinEngBOS=NialliacirculansOX=1397GN=engBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3128539919853	2	570.314023	1138.61349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.905	1	67.23	66.73	67.73	0.32449								0	0	0	0.64816	1	28006	28006		15.847	4.2069	1		+		26551	14933	13109	13166	30531	30531					0.04973120742943138
PYRCSWEGCE	10	Unmodified	_PYRCSWEGCE_					0	0	0		ENSG00000067082|ENST00000497571|KLF6	ENSG00000067082|ENST00000497571|KLF6	ENSG00000067082|ENST00000497571|KLF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.4962646365166	3	410.495319	1228.46413	0.20949	8.5994E-05	1.5508	0.0006366	1.7603	0.00072259	410.4961488028169	34.218	0.36121	34.218	34.008	34.37	0					18	11	2	0	0	0	0.89803	1	14306	14306		0.15932	0.01943	1	1439200			26552	819	13110	13167	30532	30532					-0.14096515933624687
PYRLIFEKF	9	Unmodified	_PYRLIFEKF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.8982421755791	3	404.89737	1211.67028	2.0566	0.00083273	0.048446	1.9616E-05	2.1051	0.00085234	404.89734627836634	50.331	0.76886	51.725	51.518	52.287	1.3938					82	24	4	0	0	0	0.043434	5	21080	21031;21080;21138;21187;21241		73.196	44.963	1	22750000			26553	5388	13111	13168	30533;30534;30535;30536;30537	30534					0.07291168299434503
PYRLIFEKF	9	Unmodified	_PYRLIFEKF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8454467654228	2	606.842416	1211.67028	2.5196	0.001529	1.038	0.0006299	3.5576	0.0021589	606.8432329779542	50.335	0.52563	51.728	51.583	52.109	1.3938					23	16	3	0	0	0	0.037863	1	21064	21064		75.761	35.811	1	2042400			26554	5388	13111	13168	30538	30538					0.07291168299434503
PYRLIFEKF	9	Unmodified	_PYRLIFEKF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.8980590701103	3	404.89737	1211.67028	1.5526	0.00062866	0.12794	5.1803E-05	1.6806	0.00068046	404.89735899133603	49.792	0.80337	51.769	51.506	52.31	1.9772					83	25	4	0	0	0	0.02298	5	20847	20799;20847;20898;20943;21020		96.936	59.861	1	17549000			26555	5388	13111	13168	30539;30540;30541;30542;30543	30540					0.07291168299434503
PYRLIFEKF	9	Unmodified	_PYRLIFEKF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	606.842416	1211.67028	1.6786	0.0010187	1.2052	0.00073137	2.8838	0.00175	606.8433792036975	49.778	0.31347	51.755	51.569	51.883	1.9772	0.013238	9.8507E-05	NaN	75.761	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1717400			26556	5388	13111	13168							0.07291168299434503
PYRMFKRHQRL	11	Unmodified	_PYRMFKRHQRL_					0	0	0		ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2862426638603	3	511.285745	1530.83541	2.2804	0.0011659	-1.7058	-0.00087216	0.5746	0.00029378	511.28645333509286	42.086	0.56079	43.425	43.171	43.732	1.3399					51	17	5	0	0	0	1.0357	1	17681	17681		1.4551	0.94916	1	3415500			26557	1047	13112	13169	30544	30544					0.09122076887456387
PYRMFKRHQRL	11	Unmodified	_PYRMFKRHQRL_					0	0	0		ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	ENSG00000084092|ENST00000264230|NOA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	511.285745	1530.83541	2.2151	0.0011325	-2.46	-0.0012577	-0.24488	-0.0001252	511.28680842403315	41.534	0.55515	43.427	43.179	43.734	1.8927	0.00085376	-0.00070208	NaN	1.4551	44	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2272100			26558	1047	13112	13169							0.09122076887456387
PYSLIPTAF	9	Unmodified	_PYSLIPTAF_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1;ENSG00000183655|ENST00000337975|KLHL25	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.3207275271416	2	504.773668	1007.53278	1.3501	0.00068151	1.16	0.00058552	2.5101	0.001267	504.7744932638862	77.211	0.25523	78.962	78.786	79.041	1.7514					10	7	2	0	0	0	0.094078	1	32396	32396		18.135	5.6034	1	862720			26559	4201	13113	13170	30545	30545					0.029318397000452023
PYSLSLNSI	9	Unmodified	_PYSLSLNSI_					0	0	0			REV__tr|A0A553SIH1|A0A553SIH1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14760PE=3SV=1	REV__tr|A0A553SIH1|A0A553SIH1_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14760PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2694885134697	2	497.266207	992.517862	2.539	0.0012625	-0.73263	-0.00036431	1.8063	0.00089822	497.265815145646	77.754	0.40955	78.071	77.857	78.266	0.31653					31	12	3	0	0	0	0.46905	1	32574	32574		16.942	0	1	1996600	+		26560	14850	13114	13171	30546	30546					0.021303478320305658
PYSPPTFRF	9	Unmodified	_PYSPPTFRF_					0	0	0		ENSG00000107341|ENST00000263228|UBE2R2	ENSG00000107341|ENST00000263228|UBE2R2	ENSG00000107341|ENST00000263228|UBE2R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2842285037041	2	556.282192	1110.54983	0.97442	0.00054206	3.0293	0.0016852	4.0038	0.0022272	556.2839318303062	50.471	0.6	52.446	52.006	52.606	1.9753					27	19	2	0	0	0	0.16939	1	21153	21153		36.506	6.2814	1	1900300			26561	1599	13115	13172	30547	30547					-0.0010223969416074397
PYSPVLILM	9	Unmodified	_PYSPVLILM_					0	0	0		nc|ENSG00000197168|Q6P3R8|NEK5	nc|ENSG00000197168|Q6P3R8|NEK5	nc|ENSG00000197168|Q6P3R8|NEK5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7946044802666	2	516.793546	1031.57254	2.0507	0.0010598	-0.18533	-9.5778E-05	1.8654	0.00096402	516.7935468233288	83.553	0.75687	84.741	84.326	85.083	1.1879					54	23	4	0	0	0	0.76456	1	35018	35018		4.756	0	1	5773900			26562	7961	13116	13173	30548	30548					0.05801643379095367
PYTLRTRRNST	11	Unmodified	_PYTLRTRRNST_					0	0	0		FAM122B-AGXT2L2|3|fusion;FAM122B-AGXT2L2|1|fusion;nc|ENSG00000156504|Q7Z309-4|PABIR2;nc|ENSG00000156504|Q7Z309|PABIR2;nc|ENSG00000156504|Q7Z309-2|PABIR2;nc|ENSG00000156504|Q7Z309-3|PABIR2;ENSG00000156504|ENST00000343004|PABIR2	FAM122B-AGXT2L2|3|fusion	FAM122B-AGXT2L2|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	683.3781616091728	2	682.873299	1363.73205	2.7854	0.0019021	-1.3619	-0.00093002	1.4235	0.00097205	682.8724607411768	60.298	0.3772	62.263	62.105	62.482	1.9653					32	11	4	0	0	0	0.84637	1	25356	25356		13.042	0	1	4073900			26563	3450	13117	13174	30549	30549					0.06472867980664887
PYTPINAIYL	10	Unmodified	_PYTPINAIYL_					0	0	0			REV__tr|A0A553SI47|A0A553SI47_NIACIPolyamineaminopropyltransferaseOS=NialliacirculansOX=1397GN=speEPE=3SV=1	REV__tr|A0A553SI47|A0A553SI47_NIACIPolyamineaminopropyltransferaseOS=NialliacirculansOX=1397GN=speEPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	582.2783691287041	2	582.818607	1163.62266	1.729	0.0010077	1.3425	0.00078244	3.0715	0.0017902	582.8190101115669	66.958	0.43685	68.347	68.089	68.526	1.3888					37	13	4	0	0	0	0.12493	1	27993	27993		10.824	0	1	4586100	+		26564	14835	13118	13175	30550	30550					0.04739469308628941
PYTRKEMV	8	Unmodified	_PYTRKEMV_					0	0	0		tr|A0A553SUB7|A0A553SUB7_NIACIABC-2transporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_06715PE=4SV=1	tr|A0A553SUB7|A0A553SUB7_NIACIABC-2transporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_06715PE=4SV=1	tr|A0A553SUB7|A0A553SUB7_NIACIABC-2transporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_06715PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	511.6252014040947	2	512.268227	1022.5219	2.6529	0.001359	-3.1553	-0.0016164	-0.50245	-0.00025739	512.265857674016	44.255	0.38509	45.608	45.439	45.824	1.3536					25	11	3	0	0	0	2.3239	1	18535	18535		10.183	1.5901	1	1459700			26565	16687	13119	13176	30551	30551					0.011541140541226014
PYTRMQSIAR	10	Unmodified	_PYTRMQSIAR_					0	0	0		nc|ENSG00000090975|Q9BZ72-3|PITPNM2	nc|ENSG00000090975|Q9BZ72-3|PITPNM2	nc|ENSG00000090975|Q9BZ72-3|PITPNM2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	408.7327453494072	3	408.216885	1221.62883	-0.52293	-0.00021347	-1.6434	-0.00067086	-2.1663	-0.00088432	408.2163553862912	12.244	0.31715	12.938	12.82	13.137	0.69396					21	9	3	0	0	0	0.12433	1	5127	5127		15.739	4.2439	1	1689200			26566	7838	13120	13177	30552	30552					0.026876642684783292
PYTVKRDH	8	Unmodified	_PYTVKRDH_					0	0	0		ENST00000523646.1_1_8:109241302-109241353:-|nuORF	ENST00000523646.1_1_8:109241302-109241353:-|nuORF	ENST00000523646.1_1_8:109241302-109241353:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	508.2923156619072	2	508.269616	1014.52468	2.0305	0.0010321	-0.87513	-0.0004448	1.1554	0.00058726	508.26941432243876	43.357	0.22535	43.681	43.514	43.739	0.32388					9	6	2	0	0	0	2.3239	1	18151	18151		14.582	2.9414	1	699830			26567	7104	13121	13178	30553	30553					0.017997055032765275
PYVEVKQIN	9	Unmodified	_PYVEVKQIN_					0	0	0			REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3037597537041	2	545.300581	1088.58661	2.3951	0.001306	0.4212	0.00022968	2.8163	0.0015357	545.3020243434603	47.886	0.40248	49.862	49.618	50.021	1.976					29	12	4	0	0	0	0.18809	1	20093	20093		34.402	0.95682	1	7371700	+		26568	9064	13122	13179	30554	30554					0.045860121317673475
PYVNNVPHL	9	Unmodified	_PYVNNVPHL_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7800170779228	2	526.779816	1051.54508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.053	1	37.329	36.829	37.829	1.2762								0	0	0	0.049731	1	15136	15136		60.39	32.216	1				26569	3940	13123	13180	30555	30555					0.021368761630810695
PYVNNVPHL	9	Unmodified	_PYVNNVPHL_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000447721.6_1_12:57881873-57905922:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7798950076103	2	526.779816	1051.54508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.521	1	37.339	36.839	37.839	1.8176								0	0	0	0.019937	1	14896	14896		89.427	52.961	1				26570	3940	13123	13180	30556	30556					0.021368761630810695
PYVRHKIL	8	Unmodified	_PYVRHKIL_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3190185427666	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.53	1	46.861	46.361	47.361	0.33025								0	0	0	1.0178	1	19523	19523		2.8892	0	1				26571	770	13124	13181	30557	30557					0.10686049676360199
PYYPSPGVLF	10	Unmodified	_PYYPSPGVLF_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	570.8060180544853	2	570.292225	1138.5699	2.9099	0.0016595	1.3635	0.00077757	4.2734	0.0024371	570.7965768847951	73.72	0.37035	75.516	75.317	75.687	1.7962					17	11	3	0	0	0	0.1228	1	30944	30944		34.102	21.862	1	1491100			26572	2337	13125	13182	30558	30558					0.006155112458145595
PYYPSPGVLF	10	Unmodified	_PYYPSPGVLF_					0	0	0		nc|ENSG00000127483|Q5SSJ5-3|HP1BP3;nc|ENSG00000127483|Q5SSJ5-2|HP1BP3;ENSG00000127483|ENST00000438032|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	nc|ENSG00000127483|Q5SSJ5-3|HP1BP3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	570.292225	1138.5699	3.4493	0.0019671	-0.91688	-0.00052289	2.5324	0.0014442	570.2887553154949	74.204	0.28067	75.522	75.31	75.591	1.318	0.0026903	-0.0010833	NaN	26.884	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1479400			26573	2337	13125	13182							0.006155112458145595
PYYSKFILI	9	Unmodified	_PYYSKFILI_					0	0	0		ENSG00000164815|ENST00000297431|ORC5	ENSG00000164815|ENST00000297431|ORC5	ENSG00000164815|ENST00000297431|ORC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3271362185478	2	572.326068	1142.63758	1.8481	0.0010577	0.563	0.00032222	2.4111	0.0013799	572.3263519950758	66.653	0.62521	68.042	67.782	68.407	1.3888					73	19	5	0	0	0	0.026734	4	27950	27906;27950;27989;28028		92.653	44.905	1	51351000			26574	3798	13126	13183	30559;30560;30561;30562	30560					0.07196961176623518
PYYSKFILI	9	Unmodified	_PYYSKFILI_					0	0	0		ENSG00000164815|ENST00000297431|ORC5	ENSG00000164815|ENST00000297431|ORC5	ENSG00000164815|ENST00000297431|ORC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.3267700076103	2	572.326068	1142.63758	1.7649	0.0010101	0.063223	3.6184E-05	1.8282	0.0010463	572.3260917411866	66.182	0.56531	68.071	67.808	68.373	1.8889					66	17	5	0	0	0	0.026734	4	27698	27698;27740;27779;27818		92.653	42.72	1	39550000			26575	3798	13126	13183	30563;30564;30565;30566	30563					0.07196961176623518
QAADRSELIKT	11	Unmodified	_QAADRSELIKT_					0	0	0		nc|ENSG00000155755|Q96Q45-4|TMEM237;nc|ENSG00000155755|Q96Q45-2|TMEM237;ENSG00000155755|ENST00000409883|TMEM237;nc|ENSG00000155755|Q96Q45-5|TMEM237;nc|ENSG00000155755|Q96Q45-3|TMEM237	nc|ENSG00000155755|Q96Q45-4|TMEM237	nc|ENSG00000155755|Q96Q45-4|TMEM237	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.3372680544853	2	616.335684	1230.65681	0.16227	0.00010002	2.3418	0.0014433	2.5041	0.0015433	616.3372242129805	16.745	0.14815	17.642	17.538	17.686	0.89794					6	4	2	0	0	0	0.88359	1	6975	6975		10.8	0	1	302280			26576	3428	13127	13184	30567	30567					0.05071265729566221
QAADRSELIKT	11	Unmodified	_QAADRSELIKT_					0	0	0		nc|ENSG00000155755|Q96Q45-4|TMEM237;nc|ENSG00000155755|Q96Q45-2|TMEM237;ENSG00000155755|ENST00000409883|TMEM237;nc|ENSG00000155755|Q96Q45-5|TMEM237;nc|ENSG00000155755|Q96Q45-3|TMEM237	nc|ENSG00000155755|Q96Q45-4|TMEM237	nc|ENSG00000155755|Q96Q45-4|TMEM237	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	616.335684	1230.65681	0.083278	5.1327E-05	2.9703	0.0018307	3.0535	0.001882	616.3379756570711	16.529	0.11794	17.832	17.761	17.878	1.3023	0.094533	0.00074032	NaN	10.8	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488260			26577	3428	13127	13184							0.05071265729566221
QADAGFDGPHK	11	Unmodified	_QADAGFDGPHK_					0	0	0			REV__ENSG00000198125|ENST00000397326|MB	REV__ENSG00000198125|ENST00000397326|MB	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5130493044853	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.839	1	25.839	25.339	26.339	0								0	0	0	0.57398	1	10786	10786		22.486	3.1242	1		+		26578	11703	13128	13185	30568	30568					-0.04986107572926812
QAESIPLIL	9	Unmodified	_QAESIPLIL_					0	0	0		ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1	ENSG00000079785|ENST00000233084|DDX1	ENSG00000079785|ENST00000233084|DDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2936889529228	2	492.292225	982.569897	2.9294	0.0014421	-3.0659	-0.0015093	-0.13643	-6.7165E-05	492.29080730987795	75.075	0.43464	76.381	76.12	76.555	1.3063					35	13	3	0	0	0	0.026836	2	31470	31470;31519		92.491	44.146	1	2817800			26579	995	13129	13186	30569;30570	30569					0.07791511245807214
QAESIPLIL	9	Unmodified	_QAESIPLIL_					0	0	0		ENSG00000079785|ENST00000233084|DDX1;nc|ENSG00000079785|Q92499-2|DDX1	ENSG00000079785|ENST00000233084|DDX1	ENSG00000079785|ENST00000233084|DDX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2932617068291	2	492.292225	982.569897	3.0166	0.001485	-1.0611	-0.00052238	1.9555	0.00096267	492.2914706823708	74.59	0.38176	76.372	76.131	76.513	1.7817					22	11	2	0	0	0	0.033504	2	31261	31261;31310		81.89	24.419	1	2564000			26580	995	13129	13186	30571;30572	30571					0.07791511245807214
QAFGGLLVA	9	Unmodified	_QAFGGLLVA_					0	0	0		nc|ENSG00000102100|P78381-5|SLC35A2;nc|ENSG00000102100|P78381-2|SLC35A2;ENSG00000102100|ENST00000247138|SLC35A2;nc|ENSG00000102100|P78381-4|SLC35A2	nc|ENSG00000102100|P78381-5|SLC35A2	nc|ENSG00000102100|P78381-5|SLC35A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	875.5007812380791	1	875.498529	874.491253	2.0773	0.0018187	0.45859	0.0004015	2.5359	0.0022202	875.4987537950417	63.687	0.43326	65.095	64.839	65.272	1.4071					32	13	3	0	0	0	0.051699	3	26755	26660;26706;26755		67.344	20.423	1	6373300			26581	1381	13130	13187	30573;30574;30575	30575					0.048987037313850124
QAFGGLLVA	9	Unmodified	_QAFGGLLVA_					0	0	0		nc|ENSG00000102100|P78381-5|SLC35A2;nc|ENSG00000102100|P78381-2|SLC35A2;ENSG00000102100|ENST00000247138|SLC35A2;nc|ENSG00000102100|P78381-4|SLC35A2	nc|ENSG00000102100|P78381-5|SLC35A2	nc|ENSG00000102100|P78381-5|SLC35A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	875.5015746951103	1	875.498529	874.491253	2.1423	0.0018755	1.1328	0.00099176	3.2751	0.0028673	875.4986271048695	63.104	0.62851	65.048	64.845	65.473	1.9444					40	19	3	0	0	0	0.051699	2	26521	26436;26521		67.344	9.8725	1	5223300			26582	1381	13130	13187	30576;30577	30577					0.048987037313850124
QAFLRASVP	9	Unmodified	_QAFLRASVP_					0	0	0			REV__nc|ENSG00000129990|O00445-2|SYT5	REV__nc|ENSG00000129990|O00445-2|SYT5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	988.5593139529228	1	988.557441	987.550165	1.8325	0.0018116	-2.5527	-0.0025235	-0.72015	-0.00071191	988.5554782455616	75.717	0.41383	75.717	75.534	75.948	0					23	12	2	0	0	0	0.76456	1	31541	31541		4.756	0	1	443640	+		26583	14426	13131	13188	30578	30578					0.0558918002569726
QAFPGLLQL	9	Unmodified	_QAFPGLLQL_					0	0	0		ENST00000469344.1_1_2:183943727-183960213:+|nuORF	ENST00000469344.1_1_2:183943727-183960213:+|nuORF	ENST00000469344.1_1_2:183943727-183960213:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7886230349541	2	493.78711	985.559667	3.2259	0.0015929	1.2189	0.00060189	4.4448	0.0021948	493.78659191599326	81.23	0.43376	82.463	82.284	82.718	1.2332					34	13	3	0	0	0	0.059546	1	34094	34094		64.236	13.381	1	1453100			26584	6726	13132	13189	30579	30579					0.06630948311249085
QAFPLIIKL	9	Unmodified	_QAFPLIIKL_					0	0	0		FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant;ENSG00000124279|ENST00000264669|FASTKD3	FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant	FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.8400756716728	2	521.836603	1041.65865	2.6112	0.0013626	2.4104	0.0012578	5.0216	0.0026205	521.838357532895	75.565	0.43419	76.871	76.646	77.08	1.3063					32	13	3	0	0	0	0.04145	2	31690	31690;31741		74.929	34.972	1	2808400			26585	2222	13133	13190	30580;30581	30580					0.13948971276136035
QAFPLIIKL	9	Unmodified	_QAFPLIIKL_					0	0	0		FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant;ENSG00000124279|ENST00000264669|FASTKD3	FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant	FASTKD3|p.D348Vfs*9|1|0.08|ENSG00000124279|chr5:7867041-7867042|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8386718630791	2	521.836603	1041.65865	2.7054	0.0014118	1.6113	0.00084082	4.3167	0.0022526	521.837666708315	75.057	0.43195	76.839	76.608	77.04	1.7817					28	13	3	0	0	0	0.049839	2	31461	31461;31515		68.081	33.978	1	3068000			26586	2222	13133	13190	30582;30583	30582					0.13948971276136035
QAGFSFDL	8	Unmodified	_QAGFSFDL_					0	0	0		IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant;IGF2R|p.S1819Kfs*18|1|0.12|ENSG00000197081|chr6:160078337-160078338|-/CAAGGCTCATCTGACCCCTAGGAGTT|frameshift_variant;IGF2R|p.A2191Ffs*31|1|0.04|ENSG00000197081|chr6:160090018-160090019|-/TTTTTAGTAGAGACGGGGTTTCACCATGTTG|frameshift_variant;IGF2R|p.S2210Ffs*137|1|0.18|ENSG00000197081|chr6:160090076-160090077|-/TTTGTCCCACCCGAGGTGTTCAAGCAGCCTGG|frameshift_variant;ENSG00000197081|ENST00000356956|IGF2R	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.4175292849541	1	884.414859	883.407583	1.1101	0.00098181	-2.7246	-0.0024097	-1.6145	-0.0014279	884.4124373493675	53.722	0.28358	55.123	55.033	55.317	1.4005					16	10	2	0	0	0	0.79422	1	22532	22532		21.747	0	1	2008700			26587	4979	13134	13191	30584	30584					-0.03878452436333646
QAIQWILHY	9	Unmodified	_QAIQWILHY_					0	0	0		XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;XRN1|p.G1339Efs*6|1|0.06|ENSG00000114127|chr3:142333013-142333014|-/T|frameshift_variant;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3201171755791	2	586.316566	1170.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.344	1	65.288	64.788	65.788	1.9444								0	0	0	0.046561	1	26579	26579		53.576	25.089	1				26588	1852	13135	13192	30585	30585					0.04009424605578715
QAKLGMKHLKR	11	Unmodified	_QAKLGMKHLKR_					0	0	0			REV__ENSG00000115361|ENST00000233710|ACADL	REV__ENSG00000115361|ENST00000233710|ACADL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2021057009697	4	328.202588	1308.78124	0.20818	6.8325E-05	-1.88	-0.00061701	-1.6718	-0.00054869	328.20160328390904	35.134	0.40782	36.951	36.752	37.159	1.8176					91	35	3	0	0	0	0.98455	1	14698	14698		4.7159	0.30977	1	11663000	+		26589	9435	13136	13193	30586	30586					0.13920484735876926
QAKTKKIS	8	Unmodified	_QAKTKKIS_					0	0	0		tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	tr|A0A7D6VSW6|A0A7D6VSW6_9CLOTD-alanyl-D-alaninecarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14370PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2870971560478	2	452.284734	902.554916	3.4442	0.0015578	-1.1795	-0.00053347	2.2647	0.0010243	452.28448538221227	104.44	0.091354	104.61	104.56	104.65	0.1731					13	4	4	0	0	0	0.89051	1	44192	44192		2.3027	0	1	33357000			26590	16889	13137	13194	30587	30587					0.09974064168454788
QALAALLQRVV	11	Unmodified	_QALAALLQRVV_					0	0	0			REV__nc|ENSG00000073150|Q96RD6-2|PANX2	REV__nc|ENSG00000073150|Q96RD6-2|PANX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3740112185478	2	591.371872	1180.72919	2.7834	0.001646	0.48643	0.00028766	3.2699	0.0019337	591.3722905623957	79.479	0.34315	80.73	80.551	80.895	1.2512					26	10	3	0	0	0	0.6971	1	33341	33341		18.373	1.2602	1	2387500	+		26591	8743	13138	13195	30588	30588					0.14605644593802936
QALFSFHAS	9	Unmodified	_QALFSFHAS_					0	0	0			REV__ENST00000538768.2_1_16:31138259-31142577:+|nuORF	REV__ENST00000538768.2_1_16:31138259-31142577:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2532531619072	2	504.250892	1006.48723	3.048	0.001537	3.1791	0.0016031	6.2271	0.00314	504.2519630097624	90.383	0.3677	90.592	90.372	90.74	0.20903					44	11	5	0	0	0	0.59203	1	37868	37868		11.64	0	1	3217700	+		26592	13767	13139	13196	30589	30589					-0.015753857623280965
QALKPPLITWL	11	Unmodified	_QALKPPLITWL_					0	0	0			REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2650939822197	3	427.263941	1278.76999	2.3557	0.0010065	0.5594	0.00023901	2.9151	0.0012455	427.26411590084575	40.132	0.73301	41.442	41.086	41.819	1.3102					102	23	5	0	0	0	1.0365	1	16832	16832		1.2148	0	1	54439000	+		26593	11457	13140	13197	30590	30590					0.14175985913402656
QALKPPLITWL	11	Unmodified	_QALKPPLITWL_					0	0	0			REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2648193240166	3	427.263941	1278.76999	1.7969	0.00076775	1.0364	0.0004428	2.8333	0.0012106	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	1.0365	1	16676	16676		1.2148	0	1	44576000	+		26594	11457	13140	13197	30591	30591					0.14175985913402656
QALLAARP	8	Unmodified	_QALLAARP_					0	0	0		ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2603332400322	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.985	1	89.208	88.708	89.708	0.22359								0	0	0	1.0178	1	37303	37303		2.3027	0	1				26595	2500	13141	13198	30592	30592					0.07677525825511111
QALLAGRPLL	10	Unmodified	_QALLAGRPLL_					0	0	0		ENST00000509490.5_1_4:55145100-55147845:+|nuORF;ENST00000507536.1_1_4:55143544-55147845:+|nuORF	ENST00000509490.5_1_4:55145100-55147845:+|nuORF	ENST00000509490.5_1_4:55145100-55147845:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.7915527224541	2	526.334759	1050.65496	3.2876	0.0017304	0.17272	9.0909E-05	3.4603	0.0018213	526.334113827634	60.615	0.2504	62.035	61.933	62.184	1.4196					10	7	2	0	0	0	0.1248	1	25437	25437		8.7454	1.4562	1	376990			26596	7008	13142	13199	30593	30593					0.13166301502269562
QALLDLHAL	9	Unmodified	_QALLDLHAL_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2910644412041	2	497.290017	992.565481	2.1009	0.0010448	-0.77825	-0.00038701	1.3227	0.00065774	497.2896587636248	59.034	0.29642	60.454	60.29	60.587	1.4196					22	9	3	0	0	0	0.042029	1	24758	24758		74.423	32.328	1	3560100			26597	1082	13143	13200	30594	30594					0.06890046822900331
QALLDLHAL	9	Unmodified	_QALLDLHAL_					0	0	0		ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	ENSG00000087086|ENST00000331825|FTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2898742556572	2	497.290017	992.565481	1.7435	0.00086702	-0.61356	-0.00030512	1.1299	0.0005619	497.28976822976483	58.56	0.35325	60.529	60.31	60.663	1.969					20	11	2	0	0	0	0.046276	1	24577	24577		70.716	34.671	1	3091200			26598	1082	13143	13200	30595	30595					0.06890046822900331
QALPWVRYI	9	Unmodified	_QALPWVRYI_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2;ENSG00000072958|ENST00000291439|AP1M1;nc|ENSG00000072958|Q9BXS5-2|AP1M1;ENST00000592703.1_1_19:16344886-16345243:+|nuORF	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3293945193291	2	573.326934	1144.63931	2.0856	0.0011957	2.3219	0.0013312	4.4075	0.0025269	573.3283932451499	68.851	0.90051	70.217	69.571	70.472	1.3657					71	28	3	0	0	0	0.049839	4	28902	28814;28863;28902;28946		68.081	34.598	1	4685400			26599	2402	13144	13201	30596;30597;30598;30599	30598					0.07278014985240588
QALPWVRYI	9	Unmodified	_QALPWVRYI_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2;ENSG00000072958|ENST00000291439|AP1M1;nc|ENSG00000072958|Q9BXS5-2|AP1M1;ENST00000592703.1_1_19:16344886-16345243:+|nuORF	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.3310424685478	2	573.326934	1144.63931	2.2503	0.0012902	2.1529	0.0012343	4.4032	0.0025245	573.3283341098505	68.124	0.9048	69.994	69.458	70.363	1.87					75	28	3	0	0	0	0.037761	5	28588	28491;28543;28588;28640;28687		78.149	34.291	1	4421600			26600	2402	13144	13201	30600;30601;30602;30603;30604	30602					0.07278014985240588
QALSGQIFM	9	Unmodified	_QALSGQIFM_					0	0	0		KIAA0195|p.M815I|1|0.19|ENSG00000177728|chr17:75494664-75494664|G/A|missense_variant;KIAA0195|p.S895Pfs*13|1|0.43|ENSG00000177728|chr17:75494982-75494982|C/-|frameshift_variant;KIAA0195|p.D945Qfs*32|1|0.36|ENSG00000177728|chr17:75495386-75495387|-/ACAGTTGCTGAGGGTAGGGCCAGTACCCCCT|frameshift_variant;ENSG00000177728|ENST00000314256|TMEM94;nc|ENSG00000177728|Q12767-3|TMEM94;nc|ENSG00000177728|Q12767-2|TMEM94	KIAA0195|p.M815I|1|0.19|ENSG00000177728|chr17:75494664-75494664|G/A|missense_variant	KIAA0195|p.M815I|1|0.19|ENSG00000177728|chr17:75494664-75494664|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.1707641482353	3	332.172394	993.495352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.235	1	40.235	39.735	40.735	0								0	0	0	0.42693	1	16858	16858		1.0715	0.67075	1				26601	4461	13145	13202	30605	30605					-0.0016557483720589516
QAPFALGR	8	Unmodified	_QAPFALGR_					0	0	0			REV__ENST00000342584.3_1_5:471473-471785:-|nuORF	REV__ENST00000342584.3_1_5:471473-471785:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2444946169853	2	430.24287	858.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.46	1	105.63	105.13	106.13	0.16679								0	0	0	1.0178	1	44864	44864		0.79363	0	1		+		26602	12505	13146	13203	30606	30606					0.03628952791427764
QAPGAAPL	8	Unmodified	_QAPGAAPL_					0	0	0			REV__ENSG00000180340|ENST00000315323|FZD2	REV__ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.7017089724541	2	362.703046	723.391539	-0.52175	-0.00018924	-1.0907	-0.00039559	-1.6124	-0.00058483	362.70267204976864	63.003	0.53283	63.003	62.707	63.24	0					38	16	3	0	0	0	0.89176	1	26356	26356		0.79363	0	1	7328800	+		26603	11295	13147	13204	30607	30607					0.01877886117415528
QAPRQVPRLV	10	Unmodified	_QAPRQVPRLV_					0	0	0			REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3554565310478	2	582.354014	1162.69348	2.2724	0.0013233	-0.55344	-0.0003223	1.7189	0.001001	582.3535400939439	90.486	0.58612	90.486	90.193	90.779	0					67	18	5	0	0	0	0.89803	1	37887	37887		0	0	1	57051000	+		26604	10016	13148	13205	30608	30608					0.1186360713677459
QAPRQVPRLV	10	Unmodified	_QAPRQVPRLV_					0	0	0			REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.3553344607353	2	582.354014	1162.69348	4.5577	0.0026542	-1.2141	-0.00070703	3.3436	0.0019472	582.3530870219631	89.316	0.53099	90.72	90.488	91.019	1.4045					52	16	4	0	0	0	0.89803	1	37621	37621		0	0	1	29001000	+		26605	10016	13148	13205	30609	30609					0.1186360713677459
QAQRKELRLP	10	Unmodified	_QAQRKELRLP_					0	0	0		nc|ENSG00000162852|Q6PJW8-2|CNST;ENSG00000162852|ENST00000366513|CNST	nc|ENSG00000162852|Q6PJW8-2|CNST	nc|ENSG00000162852|Q6PJW8-2|CNST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8713867068291	2	619.870028	1237.7255	2.3482	0.0014556	-0.38711	-0.00023996	1.961	0.0012156	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.88508	1	33076	33076		5.7319	0.43497	1	8928300			26606	3651	13149	13206	30610	30610					0.11614974819917734
QATSKLKQK	9	Unmodified	_QATSKLKQK_					0	0	0			REV__ENST00000584582.5_1_17:18210215-18218150:-|nuORF	REV__ENST00000584582.5_1_17:18210215-18218150:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3156616091728	2	516.314023	1030.61349	2.5624	0.001323	1.494	0.00077135	4.0564	0.0020944	516.3146843357589	83.761	0.7395	84.031	83.739	84.478	0.27029					78	23	6	0	0	0	0.84195	1	35112	35112		1.6526	0	1	143450000	+		26607	14011	13150	13207	30611	30611					0.0994112074295117
QATSKLKQK	9	Unmodified	_QATSKLKQK_					0	0	0			REV__ENST00000584582.5_1_17:18210215-18218150:-|nuORF	REV__ENST00000584582.5_1_17:18210215-18218150:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3159667849541	2	516.314023	1030.61349	2.9532	0.0015248	1.2141	0.00062688	4.1674	0.0021517	516.3144397049704	82.97	0.68259	84.183	83.858	84.54	1.2125					75	21	5	0	0	0	0.85019	1	34790	34790		0.52476	0	1	62410000	+		26608	14011	13150	13207	30612	30612					0.0994112074295117
QAVLAARSAP	10	Unmodified	_QAVLAARSAP_					0	0	0			REV__ENSG00000079257|ENST00000264265|LXN	REV__ENSG00000079257|ENST00000264265|LXN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2856628298759	2	492.285266	982.555979	2.6698	0.0013143	-1.6687	-0.00082149	1.0011	0.00049281	492.2840940168619	77.432	0.47067	77.748	77.479	77.95	0.31653					31	14	3	0	0	0	0.89039	1	32351	32351		2.4985	0.65425	1	2073300	+		26609	8795	13151	13208	30613	30613					0.06400278537364557
QAVQVYQLL	9	Unmodified	_QAVQVYQLL_					0	0	0			REV__tr|A0A553STN4|A0A553STN4_NIACIRhamnogalacturonanacetylesteraseOS=NialliacirculansOX=1397GN=CEQ21_05450PE=3SV=1	REV__tr|A0A553STN4|A0A553STN4_NIACIRhamnogalacturonanacetylesteraseOS=NialliacirculansOX=1397GN=CEQ21_05450PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3026000857353	2	531.303124	1060.5917	1.7029	0.00090475	-0.039264	-2.0861E-05	1.6636	0.00088389	531.3026663515443	71.733	0.56246	73.074	72.748	73.31	1.3415					43	17	3	0	0	0	0.24063	1	30097	30097		28.487	5.3384	1	9913700	+		26610	15249	13152	13209	30614	30614					0.06382315994369492
QAVQVYQLL	9	Unmodified	_QAVQVYQLL_					0	0	0			REV__tr|A0A553STN4|A0A553STN4_NIACIRhamnogalacturonanacetylesteraseOS=NialliacirculansOX=1397GN=CEQ21_05450PE=3SV=1	REV__tr|A0A553STN4|A0A553STN4_NIACIRhamnogalacturonanacetylesteraseOS=NialliacirculansOX=1397GN=CEQ21_05450PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3034545779228	2	531.303124	1060.5917	1.688	0.00089681	0.062258	3.3078E-05	1.7502	0.00092989	531.3028590748439	71.221	0.53108	73.045	72.787	73.318	1.824					34	15	3	0	0	0	0.19075	2	29862	29862;29918		34.102	5.6156	1	8621900	+		26611	15249	13152	13209	30615;30616	30615					0.06382315994369492
QAYQNWVK	8	Unmodified	_QAYQNWVK_					0	0	0		ENST00000531334.1_1_1:21546450-21548377:-|nuORF	ENST00000531334.1_1_1:21546450-21548377:-|nuORF	ENST00000531334.1_1_1:21546450-21548377:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1391479372978	2	518.764166	1035.51378	0.7117	0.0003692	1.2554	0.00065124	1.9671	0.0010204	518.7641762370639	25.052	0.24183	26.769	26.635	26.877	1.7167					16	7	3	0	0	0	2.3239	1	10515	10515		5.2307	0.90143	1	981670			26612	7168	13153	13210	30617	30617					-0.002556968710223373
QAYQNWVK	8	Unmodified	_QAYQNWVK_					0	0	0		ENST00000531334.1_1_1:21546450-21548377:-|nuORF	ENST00000531334.1_1_1:21546450-21548377:-|nuORF	ENST00000531334.1_1_1:21546450-21548377:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.764166	1035.51378	1.4945	0.0007753	1.6237	0.00084232	3.1182	0.0016176	518.7641562687203	25.405	0.3052	26.664	26.527	26.832	1.2594	-0.052306	0.00024756	NaN	5.2307	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1237000			26613	7168	13153	13210							-0.002556968710223373
QCCQSVFH	8	Unmodified	_QCCQSVFH_					0	0	0			REV__ENSG00000259823|ENST00000590317|LYPD8	REV__ENSG00000259823|ENST00000590317|LYPD8	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1931945681572	2	476.194205	950.373857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	103.87	103.37	104.37	0								0	0	0	1.0178	1	43713	43713		0.79363	0	1		+		26614	11982	13154	13211	30618	30618					-0.10331520471390832
QCEECQCWQH	10	Unmodified	_QCEECQCWQH_					0	0	0		PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant;ENSG00000025293|ENST00000374012|PHF20	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	647.2253906130791	2	647.225907	1292.43726	1.5043	0.00097364	0.014027	9.0783E-06	1.5184	0.00098272	647.2253069273504	100.4	0.15311	100.4	100.29	100.44	0					10	4	3	0	0	0	0.86043	1	42026	42026		5.7319	2.4505	1	5155200			26615	624	13155	13212	30619	30619					-0.19725947816459666
QCEECQCWQH	10	Unmodified	_QCEECQCWQH_					0	0	0		PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant;ENSG00000025293|ENST00000374012|PHF20	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	647.2294189333916	2	647.225907	1292.43726	2.6646	0.0017246	-0.4092	-0.00026484	2.2554	0.0014598	647.2260729374591	100.32	0.12411	100.39	100.32	100.44	0.072716					8	3	3	0	0	0	0.86043	1	41995	41995		5.7319	3.8876	1	3312800			26616	624	13155	13212	30620	30620					-0.19725947816459666
QCEECQCWQH	10	Unmodified	_QCEECQCWQH_					0	0	0		PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant;ENSG00000025293|ENST00000374012|PHF20	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	647.2254516482353	2	647.225907	1292.43726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.18	1	102.24	101.74	102.74	0.062805								0	0	0	0.66176	1	42790	42790		1.4819	0.8804	1				26617	624	13155	13212	30621	30621					-0.19725947816459666
QCEECQCWQH	10	Unmodified	_QCEECQCWQH_					0	0	0		PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant;ENSG00000025293|ENST00000374012|PHF20	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	647.2302123904228	2	647.225907	1292.43726	3.1935	0.0020669	-1.5522	-0.0010046	1.6413	0.0010623	647.2261010764378	98.522	0.14185	98.75	98.669	98.811	0.22776					11	4	3	0	0	0	0.89803	1	41477	41477		1.4819	0.15237	1	12706000			26618	624	13155	13212	30622	30622					-0.19725947816459666
QCEECQCWQH	10	Unmodified	_QCEECQCWQH_					0	0	0		PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant;ENSG00000025293|ENST00000374012|PHF20	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	PHF20|p.A984Vfs*15|1|0.19|ENSG00000025293|chr20:35947538-35947539|-/TT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	647.225907	1292.43726	2.9391	0.0019023	0.13471	8.7188E-05	3.0738	0.0019895	647.7282869909733	100.18	0.1272	100.36	100.28	100.41	0.18047	-0.024081	0.0002491	NaN	5.7319	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1520200			26619	624	13155	13212							-0.19725947816459666
QCFRDGYFV	9	Unmodified	_QCFRDGYFV_					0	0	0		ZP1|p.N304*|1|0.08|ENSG00000149506|chr11:60871039-60871040|-/T|frameshift_variant;ZP1|p.L296Yfs*52|1|0.1|ENSG00000149506|chr11:60871016-60871017|-/A|frameshift_variant;ENSG00000149506|ENST00000278853|ZP1	ZP1|p.N304*|1|0.08|ENSG00000149506|chr11:60871039-60871040|-/T|frameshift_variant	ZP1|p.N304*|1|0.08|ENSG00000149506|chr11:60871039-60871040|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.7536498904228	2	567.755484	1133.49641	1.3293	0.0007547	-0.57438	-0.00032611	0.7549	0.0004286	567.7539925309134	95.925	0.23246	95.925	95.773	96.005	0					27	7	5	0	0	0	0.68551	1	40109	40109		7.9102	0	1	5881000			26620	3242	13156	13213	30623	30623					-0.06499360468342275
QCGHGGAC	8	Unmodified	_QCGHGGAC_					0	0	0			REV__ENST00000325995.7_1_8:124664024-124664426:-|nuORF	REV__ENST00000325995.7_1_8:124664024-124664426:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	367.2695190310478	2	366.63124	731.247928	0.022211	8.1432E-06	-4.1107	-0.0015071	-4.0885	-0.001499	366.62887362208266	85.278	0.34882	85.278	85.1	85.448	0					16	10	2	0	0	0	2.3239	1	35506	35506		0	0	1	250750	+		26621	12431	13157	13214	30624	30624					-0.12844607256818108
QCHLQNKP	8	Unmodified	_QCHLQNKP_					0	0	0		nc|ENSG00000198556|Q5FWF6-2|ZNF789;ENSG00000198556|ENST00000331410|ZNF789	nc|ENSG00000198556|Q5FWF6-2|ZNF789	nc|ENSG00000198556|Q5FWF6-2|ZNF789	MSMS	GG20161007_CRH_Patient100_A02_02	2	323.1647216677666	3	323.164121	966.470534	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.057	1	97.162	96.662	97.662	0.105								0	0	0	1.0178	1	40613	40613		1.4819	0	1				26622	5055	13158	13215	30625	30625					-0.014042099199514269
QCHPQCDS	8	Unmodified	_QCHPQCDS_					0	0	0		ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1674072146416	2	459.165644	916.316736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.82	1	103.98	103.48	104.48	0.16055								0	0	0	1.0178	1	43853	43853		2.5775	0	1				26623	5132	13159	13216	30626	30626					-0.1447698774776427
QCHPQCDS	8	Unmodified	_QCHPQCDS_					0	0	0		ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	ENSG00000204301|ENST00000375023|NOTCH4	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1671935915947	2	459.165644	916.316736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.78	1	103.96	103.46	104.46	0.1731								0	0	0	1.0178	1	43782	43782		2.5775	0	1				26624	5132	13159	13216	30627	30627					-0.1447698774776427
QCNGVWAQDV	10	Unmodified	_QCNGVWAQDV_					0	0	0			REV__ENST00000553259.1_1_12:49686512-49686761:-|nuORF	REV__ENST00000553259.1_1_12:49686512-49686761:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2521850466728	2	560.248023	1118.48149	3.4397	0.0019271	2.247	0.0012589	5.6867	0.0031859	560.2493934844854	81.349	0.36682	83.044	82.892	83.258	1.6959					37	11	5	0	0	0	0.86043	1	34107	34107		5.7319	0.97584	1	1584100	+		26625	13843	13160	13217	30628	30628					-0.07300852336334174
QDAPAATR	8	Unmodified	_QDAPAATR_					0	0	0		ENST00000528318.5_1_8:42716773-42751856:-|nuORF;nc|ENSG00000120925|Q96K19-5|RNF170;nc|ENSG00000120925|Q96K19-3|RNF170;nc|ENSG00000120925|Q96K19-2|RNF170;ENSG00000120925|ENST00000527424|RNF170	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2113220095634	2	415.211766	828.40898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.26	1	105.32	104.82	105.82	0.056801								0	0	0	1.0178	1	44585	44585		0.79363	0	1				26626	7146	13161	13218	30629	30629					-0.012088183475952974
QDDCCGCCG	9	Unmodified	_QDDCCGCCG_					0	0	0		ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	903.2124511599541	1	903.20997	902.202694	3.7332	0.0033719	3.7486	0.0033858	7.4819	0.0067577	903.2140909327901	95.349	0.12813	95.771	95.675	95.803	0.42119					6	5	2	0	0	0	0.85403	1	40130	40130		0	0	1	2239300			26627	4119	13162	13219	30630	30630					-0.2523196189653163
QDEEEWIK	8	Unmodified	_QDEEEWIK_					0	0	0		ENST00000392749.6_2_2:162016993-162036252:+|nuORF;ENST00000456358.5_3_2:162017293-162036252:+|nuORF;ENST00000406287.5_1_2:162017856-162036252:+|nuORF;ENST00000259075.6_2_2:161993477-162036252:+|nuORF;ENST00000440506.5_1_2:162016895-162036252:+|nuORF	ENST00000392749.6_2_2:162016993-162036252:+|nuORF	ENST00000392749.6_2_2:162016993-162036252:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	359.2554504275322	3	359.501345	1075.4822	2.1561	0.00077512	-1.2819	-0.00046084	0.87423	0.00031429	359.5018311982111	75.602	0.37025	75.924	75.742	76.112	0.32163					39	11	5	0	0	0	2.3239	1	31545	31545		1.6526	0	1	2044800			26628	5612	13163	13220	30631	30631					-0.05251734415628562
QDHCILLRSP	10	Unmodified	_QDHCILLRSP_					0	0	0			REV__ENST00000606212.1_1_1:247365030-247365162:-|nuORF	REV__ENST00000606212.1_1_1:247365030-247365162:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	393.7554504275322	3	394.541369	1180.60228	0.39919	0.0001575	-1.4839	-0.00058547	-1.0847	-0.00042798	394.5413077002704	23.96	0.24895	25.644	25.504	25.753	1.6845					15	7	3	0	0	0	0.12552	1	10015	10015		3.0723	2.2079	1	419750	+		26629	14136	13164	13221	30632	30632					0.019199753771545147
QDIDRNQYWYW	11	Unmodified	_QDIDRNQYWYW_					0	0	0			REV__L1PA5_dup4809|chr6:151863684-151865093:+|1.0617149984704268|0.1855937726213876|2.52|421.0|13|2|sense	REV__L1PA5_dup4809|chr6:151863684-151865093:+|1.0617149984704268|0.1855937726213876|2.52|421.0|13|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	793.8541137576103	2	793.854772	1585.69499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.112	1	96.533	96.033	97.033	0.4212								0	0	0	0.63775	1	40442	40442		0.96228	0.61164	1		+		26630	14244	13165	13222	30633	30633					-0.07442848355753995
QDLYLGRAEE	10	Unmodified	_QDLYLGRAEE_					0	0	0		nc|ENSG00000033100|Q9P2E5-2|CHPF2;ENSG00000033100|ENST00000035307|CHPF2	nc|ENSG00000033100|Q9P2E5-2|CHPF2	nc|ENSG00000033100|Q9P2E5-2|CHPF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2975341677666	2	597.293485	1192.57242	3.1822	0.0019007	3.3439	0.0019973	6.526	0.003898	597.295519816167	62.28	0.54612	64.237	63.999	64.545	1.9571					52	17	4	0	0	0	0.24244	1	26129	26129		43.772	1.9328	1	33699000			26631	640	13166	13223	30634	30634					-0.016166850871968563
QDTDEEYDDHK	11	Unmodified	_QDTDEEYDDHK_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.5130493044853	3	465.516271	1393.52698	0.91517	0.00042602	-4.0686	-0.001894	-3.1535	-0.001468	465.8493076302265	14.528	0.65002	14.528	14.286	14.936	0					46	20	3	0	0	0	1.0254	1	6070	6070		2.2527	0.34635	1	1403700	+		26632	10768	13167	13224	30635	30635					-0.15404000130888562
QDVLWLQEV	9	Unmodified	_QDVLWLQEV_					0	0	0		ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.2982665896416	2	565.298039	1128.58152	1.6076	0.00090878	-0.18469	-0.0001044	1.4229	0.00080438	565.2970124634811	52.063	0.36965	52.063	51.886	52.255	0					19	11	2	0	0	0	0.71526	1	21708	21708		6.7232	0.51738	1	644030			26633	7184	13168	13225	30636	30636					0.02237708269126415
QDVLWLQEV	9	Unmodified	_QDVLWLQEV_					0	0	0		ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	565.3004028201103	2	565.298039	1128.58152	1.6145	0.00091267	1.0181	0.00057551	2.6326	0.0014882	565.2982341220554	51.584	0.40218	51.91	51.726	52.128	0.32554					19	12	2	0	0	0	0.61249	1	21651	21651		10.824	1.4408	1	503780			26634	7184	13168	13225	30637	30637					0.02237708269126415
QDVLWLQEV	9	Unmodified	_QDVLWLQEV_					0	0	0		ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2988159060478	2	565.298039	1128.58152	1.6643	0.00094084	1.2441	0.00070329	2.9084	0.0016441	565.2983735980645	49.953	0.49447	51.93	51.696	52.191	1.9772					38	15	4	0	0	0	0.18809	1	20880	20880		34.402	2.0962	1	5357700			26635	7184	13168	13225	30638	30638					0.02237708269126415
QDVLWLQEV	9	Unmodified	_QDVLWLQEV_					0	0	0		ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	ENST00000533277.5_1_11:66610378-66610702:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	565.298039	1128.58152	2.2663	0.0012812	0.9158	0.0005177	3.1821	0.0017989	565.2978844329891	50.436	0.61409	51.83	51.583	52.197	1.3938	-0.10323	2.4706E-05	NaN	34.402	43	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4596400			26636	7184	13168	13225							0.02237708269126415
QDVQQQPQDL	10	Unmodified	_QDVQQQPQDL_					0	0	0		nc|ENSG00000102445|Q9H714-2|RUBCNL;nc|ENSG00000102445|Q9H714-1|RUBCNL;nc|ENSG00000102445|Q9H714-4|RUBCNL;ENSG00000102445|ENST00000429979|RUBCNL	nc|ENSG00000102445|Q9H714-2|RUBCNL	nc|ENSG00000102445|Q9H714-2|RUBCNL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.7928344607353	2	599.788566	1197.56258	2.086	0.0012512	2.2722	0.0013629	4.3582	0.002614	599.7915737490256	78.257	0.49692	79.992	79.761	80.258	1.735					37	15	3	0	0	0	0.57775	1	32840	32840		24.021	3.606	1	8051700			26637	1391	13169	13226	30639	30639					-0.028298730925598647
QDWLVRRFWLM	11	Unmodified	_QDWLVRRFWLM_					0	0	0			REV__ENSG00000091536|ENST00000647165|MYO15A	REV__ENSG00000091536|ENST00000647165|MYO15A	MSMS	GG20161007_CRH_Patient100_W632_01	3	775.4078246951103	2	775.408463	1548.80237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.559	1	96.843	96.343	97.343	0.28442								0	0	0	0.63775	1	40630	40630		2.4985	0	1		+		26638	8904	13170	13227	30640	30640					0.049924500447559694
QDWNLVSF	8	Unmodified	_QDWNLVSF_					0	0	0			REV__ENSG00000183508|ENST00000369448|TENT5C	REV__ENSG00000183508|ENST00000369448|TENT5C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.3182250857353	2	504.742899	1007.47125	2.3903	0.0012065	4.3428	0.002192	6.7331	0.0033985	504.74513236774055	76.523	0.22878	78.291	78.19	78.419	1.7672					9	6	2	0	0	0	2.3239	1	32075	32075		9.3474	0.75416	1	203120	+		26639	11395	13171	13228	30641	30641					-0.032190919992331146
QEAKTHIS	8	Unmodified	_QEAKTHIS_					0	0	0		tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	tr|A0A553SNP0|A0A553SNP0_NIACIRibosomeprotectionproteinVmlROS=NialliacirculansOX=1397GN=vmlRPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	457.2436401247978	2	457.240524	912.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	104.03	103.53	104.53	0.16055								0	0	0	1.0178	1	43892	43892		4.3292	0	1				26640	16429	13172	13229	30642	30642					0.0067602385800000775
QEASLVKPGPQ	11	Unmodified	_QEASLVKPGPQ_					0	0	0			REV__ENSG00000167676|ENST00000301286|PLIN4	REV__ENSG00000167676|ENST00000301286|PLIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3161498904228	2	577.31422	1152.61389	1.1803	0.0006814	3.2328	0.0018663	4.4131	0.0025477	577.3161491867963	33.147	0.33156	33.441	33.276	33.608	0.29431					16	10	2	0	0	0	0.89436	1	13893	13893		10.151	2.5416	1	968150	+		26641	10872	13173	13230	30643	30643					0.043684956721335766
QEECDHLDRLF	11	Unmodified	_QEECDHLDRLF_					0	0	0		nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4;ENSG00000160505|ENST00000301295|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.8820678591728	3	468.878598	1403.61396	2.9815	0.001398	4.1049	0.0019247	7.0863	0.0033226	468.88112466412605	63.184	0.34611	64.597	64.439	64.785	1.4134					25	10	3	0	0	0	0.99899	1	26504	26504		3.8459	0.25323	1	1387200			26642	3562	13174	13231	30644	30644					-0.07169872390181808
QEECDHLDRLF	11	Unmodified	_QEECDHLDRLF_					0	0	0		nc|ENSG00000160505|Q96MN2-2|NLRP4;nc|ENSG00000160505|Q96MN2-3|NLRP4;ENSG00000160505|ENST00000301295|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	nc|ENSG00000160505|Q96MN2-2|NLRP4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	468.878598	1403.61396	3.026	0.0014188	3.7505	0.0017585	6.7765	0.0031774	468.8808912168315	62.668	0.34546	64.612	64.375	64.721	1.9444	0.0076252	-0.00015929	NaN	3.8459	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2227700			26643	3562	13174	13231							-0.07169872390181808
QEEEQQSEEK	10	Unmodified	_QEEEQQSEEK_					0	0	0		ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.8484374880791	3	421.849361	1262.52625	-0.28999	-0.00012233	-0.49189	-0.0002075	-0.78188	-0.00032984	421.84882424729693	12.207	0.59467	12.901	12.572	13.167	0.69396					36	18	3	0	0	0	0.88314	1	5118	5118		1.5923	0.37745	1	1772300			26644	5322	13175	13232	30645	30645					-0.09450794779945682
QEEEQQSEEK	10	Unmodified	_QEEEQQSEEK_					0	0	0		ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	ENSG00000236383|ENST00000636331|CCDC200	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.8488036990166	3	421.849361	1262.52625	0.087509	3.6916E-05	0.33667	0.00014203	0.42418	0.00017894	421.8490575297269	12.111	0.43475	12.899	12.66	13.095	0.78751					26	13	3	0	0	0	0.87699	1	4994	4994		1.9064	0	1	790900			26645	5322	13175	13232	30646	30646					-0.09450794779945682
QEFIDNLQL	9	Unmodified	_QEFIDNLQL_					0	0	0		tr|A0A553SMJ0|A0A553SMJ0_NIACIDUF1048domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22680PE=4SV=1	tr|A0A553SMJ0|A0A553SMJ0_NIACIDUF1048domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22680PE=4SV=1	tr|A0A553SMJ0|A0A553SMJ0_NIACIDUF1048domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22680PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	560.3251830935478	2	560.287671	1118.56079	1.5899	0.0008908	-1.598	-0.00089535	-0.0081344	-4.5576E-06	560.2859621703876	54.951	0.19885	56.356	56.272	56.47	1.4048					10	6	2	0	0	0	0.10591	1	23016	23016		13.906	5.1606	1	1111200			26646	16378	13176	13233	30647	30647					0.0062511788946721936
QEFPIANII	9	Unmodified	_QEFPIANII_					0	0	0		tr|A0A7D6ZGC2|A0A7D6ZGC2_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17785PE=4SV=1	tr|A0A7D6ZGC2|A0A7D6ZGC2_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17785PE=4SV=1	tr|A0A7D6ZGC2|A0A7D6ZGC2_9CLOTSensorhistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17785PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7904540896416	2	522.78985	1043.56515	1.7996	0.00094083	-0.41926	-0.00021918	1.3804	0.00072165	522.7897016858185	71.734	0.89124	73.075	72.512	73.403	1.3415					85	28	4	0	0	0	0.070055	1	30095	30095		60.074	0	1	30726000			26647	17069	13177	13234	30648	30648					0.04510627103036313
QEIEGTPRL	9	Unmodified	_QEIEGTPRL_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2772704958916	2	521.780013	1041.54547	2.0608	0.0010753	0.25905	0.00013517	2.3198	0.0012105	521.7822010188023	69.407	0.69167	71.26	70.948	71.639	1.853					53	21	3	0	0	0	0.13873	1	29055	29055		39.957	1.7818	1	12116000	+		26648	8844	13178	13235	30649	30649					0.026362510922808724
QEIINANLQ	9	Unmodified	_QEIINANLQ_					0	0	0		tr|A0A553SKX2|A0A553SKX2_NIACIDNArepairproteinRecNOS=NialliacirculansOX=1397GN=recNPE=3SV=1	tr|A0A553SKX2|A0A553SKX2_NIACIDNArepairproteinRecNOS=NialliacirculansOX=1397GN=recNPE=3SV=1	tr|A0A553SKX2|A0A553SKX2_NIACIDNArepairproteinRecNOS=NialliacirculansOX=1397GN=recNPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2764770388603	2	521.780013	1041.54547	2.8201	0.0014715	-0.26576	-0.00013867	2.5543	0.0013328	521.78201870271	69.903	0.72113	71.257	70.927	71.648	1.3536					55	22	3	0	0	0	0.35391	1	29255	29255		22.736	0.98964	1	14766000			26649	16312	13179	13236	30650	30650					0.026362510922808724
QEKKIKKG	8	Unmodified	_QEKKIKKG_					0	0	0		ENST00000486028.1_1_19:3574329-3575756:+|nuORF	ENST00000486028.1_1_19:3574329-3575756:+|nuORF	ENST00000486028.1_1_19:3574329-3575756:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2077819705009	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.78	1	103.84	103.34	104.34	0.059502								0	0	0	1.0178	1	43621	43621		0.45834	0	1				26650	6860	13180	13237	30651	30651					0.11662039576856387
QEKKIKKKPVV	11	Unmodified	_QEKKIKKKPVV_					0	0	0			REV__nc|ENSG00000147548|Q9BZ95-3|NSD3	REV__nc|ENSG00000147548|Q9BZ95-3|NSD3	MSMS	GG20161007_CRH_Patient100_W632_02	4	662.8820678591728	2	662.937379	1323.86021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.166	1	99.391	98.891	99.891	0.22545								0	0	0	0.63775	1	41726	41726		2.9952	1.6657	1		+		26651	10328	13181	13238	30652	30652					0.2112303524181698
QEKVLYLV	8	Unmodified	_QEKVLYLV_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5846435427666	1	991.582259	990.574983	3.2984	0.0032707	0.5029	0.00049867	3.8013	0.0037693	991.582473077345	71.881	0.28004	73.222	73.03	73.31	1.3415					11	8	2	0	0	0	0.49046	1	30169	30169		48.346	4.4876	1	944400			26652	5295	13182	13239	30653	30653					0.07931815108429419
QEKVLYLV	8	Unmodified	_QEKVLYLV_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	991.582259	990.574983	2.3052	0.0022857	1.4732	0.0014608	3.7784	0.0037466	991.5820520054392	73.071	0.22064	73.396	73.244	73.464	0.32494	0.086949	0.00048581	NaN	48.346	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427630			26653	5295	13182	13239							0.07931815108429419
QELETYYRMRE	11	Unmodified	_QELETYYRMRE_					0	0	0		tr|A0A553SRR2|A0A553SRR2_NIACIDUF3841domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01535PE=4SV=1	tr|A0A553SRR2|A0A553SRR2_NIACIDUF3841domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01535PE=4SV=1	tr|A0A553SRR2|A0A553SRR2_NIACIDUF3841domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01535PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	759.3583251833916	2	759.35629	1516.69803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	102.14	101.64	102.64	0.17032								0	0	0	0.63775	1	42905	42905		2.4985	0	1				26654	16575	13183	13240	30654	30654					-0.0396534129331485
QELKLITVQ	9	Unmodified	_QELKLITVQ_					0	0	0			REV__ENSG00000139668|ENST00000298125|WDFY2	REV__ENSG00000139668|ENST00000298125|WDFY2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.2918578982353	2	536.324057	1070.63356	1.7846	0.00095711	3.3632	0.0018037	5.1477	0.0027608	536.325926459882	41.039	0.39	41.356	41.108	41.498	0.31683					27	12	3	0	0	0	0.11216	1	17289	17289		11.495	3.5846	1	2841700	+		26655	10107	13184	13241	30655	30655					0.10106871682887686
QELMDDCSAVL	11	Unmodified	_QELMDDCSAVL_					0	0	0		ENSG00000130348|ENST00000369046|QRSL1	ENSG00000130348|ENST00000369046|QRSL1	ENSG00000130348|ENST00000369046|QRSL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.8500549197197	3	408.514268	1222.52097	1.4343	0.00058593	3.1001	0.0012665	4.5344	0.0018524	408.85012488769996	71.204	1.5377	73.028	72.518	74.056	1.824					161	49	5	0	0	0	0.96769	1	29883	29883		2.6312	0	1	5702100			26656	2429	13185	13242	30656	30656					-0.08138513167773453
QEMEEDSEDEK	11	Unmodified	_QEMEEDSEDEK_					0	0	0		SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8397399783134	3	456.841766	1367.50347	0.52467	0.00023969	0.299	0.0001366	0.82367	0.00037629	456.84190627707477	7.5179	2.0624	7.5179	5.9918	8.0542	0					165	86	3	0	0	0	1.0369	2	2663	2663;2710		1.1098	0.41209	1	1515600			26657	16011	13186	13243	30657;30658	30657					-0.16558181959749163
QEMEEDSEDEK	11	Unmodified	_QEMEEDSEDEK_					0	0	0		SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.8413879275322	3	456.841766	1367.50347	0.73445	0.00033553	-0.24439	-0.00011165	0.49005	0.00022388	456.8418863360076	9.9718	1.277	10.05	9.5609	10.838	0.077971					109	47	3	0	0	0	1.0369	1	4293	4293		1.1098	0	1	1303400			26658	16011	13186	13243	30659	30659					-0.16558181959749163
QEMEEDSEDEK	11	Unmodified	_QEMEEDSEDEK_					0	0	0		SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.8412353396416	3	456.841766	1367.50347	-0.17101	-7.8126E-05	0.74367	0.00033974	0.57265	0.00026161	456.841967260779	10.024	1.2845	10.675	10.176	11.46	0.65058					94	45	3	0	0	0	1.0369	1	4253	4253		1.1098	0.41209	1	1187100			26659	16011	13186	13243	30660	30660					-0.16558181959749163
QEMEEDSEDEK	11	Unmodified	_QEMEEDSEDEK_					0	0	0		SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	SUZ12|p.V581E|1|0.67|ENSG00000178691|chr17:31995710-31995710|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.8415099978447	3	456.841766	1367.50347	0.27704	0.00012657	0.42439	0.00019388	0.70143	0.00032044	456.8412360899644	10.28	0.62022	11.025	10.76	11.381	0.74462					32	21	2	0	0	0	1.0369	1	4277	4277		1.1098	0.41209	1	413840			26660	16011	13186	13243	30661	30661					-0.16558181959749163
QEMQEVQSSR	10	Unmodified	_QEMQEVQSSR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000495810.1_1_7:26235422-26236427:-|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.2805053591728	2	611.280051	1220.54555	0.034405	2.1031E-05	1.2581	0.00076906	1.2925	0.00079009	611.2810229313864	11.765	0.1254	12.552	12.473	12.598	0.78751					6	3	2	0	0	0	0.066237	1	4891	4891		104.48	66.309	1	1240700			26661	2162	13187	13244	30662	30662					-0.055901169700291575
QEMQEVQSSR	10	Unmodified	_QEMQEVQSSR_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1;ENST00000495810.1_1_7:26235422-26236427:-|nuORF	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	611.280051	1220.54555	-0.37786	-0.00023098	3.7415	0.0022871	3.3637	0.0020561	611.2827868801756	11.892	0.15527	12.586	12.479	12.634	0.69396	0.017137	0.00076336	NaN	104.48	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	903620			26662	2162	13187	13244							-0.055901169700291575
QENKNKKRF	9	Unmodified	_QENKNKKRF_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.3380004763603	2	596.333279	1190.652	3.3224	0.0019813	0.86435	0.00051544	4.1868	0.0024967	596.3334257099367	92.226	0.22903	93.553	93.47	93.699	1.3269					9	6	2	0	0	0	0.85019	1	38836	38836		0.52476	0	1	736480	+		26663	12655	13188	13245	30663	30663					0.06430426377460208
QENKNKKRF	9	Unmodified	_QENKNKKRF_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	596.333279	1190.652	2.2688	0.0013529	-0.65771	-0.00039222	1.6111	0.00096072	596.332480510954	93.218	0.3142	93.218	93.013	93.327	0	-0.21255	-0.00013486	NaN	0.52476	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	856490	+		26664	12655	13188	13245							0.06430426377460208
QENKNKKRF	9	Unmodified	_QENKNKKRF_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	596.333279	1190.652	4.2109	0.0025111	-1.0128	-0.00060398	3.198	0.0019071	596.3324722079003	92.586	0.22838	93.522	93.408	93.637	0.93623	0.090947	-0.00055839	NaN	0.52476	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557810	+		26665	12655	13188	13245							0.06430426377460208
QENKNKKRF	9	Unmodified	_QENKNKKRF_					0	0	0			REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	REV__ENST00000416479.1_2_1:101354397-101360312:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	596.333279	1190.652	3.3224	0.0019813	0.86435	0.00051544	4.1868	0.0024967	596.3334257099367	92.226	0.22903	93.553	93.47	93.699	1.3269	0.12161	0.0016805	NaN	0.52476	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	736480	+		26666	12655	13188	13245							0.06430426377460208
QERELHKQ	8	Unmodified	_QERELHKQ_					0	0	0		ENSG00000125831|ENST00000377009|CST11	ENSG00000125831|ENST00000377009|CST11	ENSG00000125831|ENST00000377009|CST11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1068.084399402142	1	1067.55923	1066.55196	1.29	0.0013772	1.015	0.0010836	2.305	0.0024608	1068.5676134010662	35.136	0.056351	36.953	36.918	36.974	1.8176					7	4	3	0	0	0	2.3239	1	14719	14719		13.508	0	1	4779100			26667	2281	13189	13246	30664	30664					0.021341890436588073
QERLLLRQR	9	Unmodified	_QERLLLRQR_					0	0	0			REV__ENST00000492047.1_1_2:74686007-74686662:+|nuORF	REV__ENST00000492047.1_1_2:74686007-74686662:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3710204958916	2	606.370195	1210.72584	1.9807	0.0012011	-0.84354	-0.0005115	1.1372	0.00068956	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	0.83753	1	32111	32111		1.8442	0.36234	1	10235000	+		26668	13436	13190	13247	30665	30665					0.12890394539772387
QERQEQEERER	11	Unmodified	_QERQEQEERER_					0	0	0		ENST00000471767.1_1_5:176893910-176894598:-|nuORF;ENST00000472831.5_1_5:176884436-176895158:-|nuORF;nc|ENSG00000113758|Q16643|DBN1;nc|ENSG00000113758|Q16643-2|DBN1;ENSG00000113758|ENST00000393565|DBN1	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	ENST00000471767.1_1_5:176893910-176894598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.5743286013603	3	506.241475	1515.7026	0.31869	0.00016134	-3.0275	-0.0015326	-2.7088	-0.0013713	506.2397993241596	17.579	0.2426	18.881	18.722	18.965	1.3023					22	7	4	0	0	0	0.98969	1	7290	7290		4.4062	0	1	1219600			26669	1840	13191	13248	30666	30666					-0.034627408261712844
QERYRAIQ	8	Unmodified	_QERYRAIQ_					0	0	0		nc|ENSG00000131018|Q8NF91-4|SYNE1;ENSG00000131018|ENST00000367255|SYNE1;ENST00000471834.1_1_6:152657861-152688565:-|nuORF;SYNE1|p.R3674Tfs*53|1|0.12|ENSG00000131018|chr6:152353650-152353651|-/ATAATTGCTTCAAAAATTTGAG|frameshift_variant;SYNE1|p.T4511Lfs*10|1|0.03|ENSG00000131018|chr6:152331155-152331155|G/-|frameshift_variant;SYNE1|p.A5284Rfs*31|1|0.11|ENSG00000131018|chr6:152323546-152323547|-/C|frameshift_variant;nc|ENSG00000131018|Q8NF91-7|SYNE1	nc|ENSG00000131018|Q8NF91-4|SYNE1	nc|ENSG00000131018|Q8NF91-4|SYNE1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1062.901782214642	1	1063.56432	1062.55704	1.3661	0.0014529	3.6412	0.0038727	5.0073	0.0053256	1064.5756075940762	37.501	0.046101	38.785	38.748	38.794	1.284					6	3	2	0	0	0	2.3239	1	15738	15738		13.508	0	1	2825100			26670	2475	13192	13249	30667	30667					0.02826492906274325
QETAEKWQEK	10	Unmodified	_QETAEKWQEK_					0	0	0		SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	638.8126098513603	2	638.812042	1275.60953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.923	1	11.923	11.423	12.423	0								0	0	0	0.6513	1	4931	4931		13.042	2.2185	1				26671	4305	13193	13250	30668	30668					-0.017250135414542456
QEVAVKEQLT	10	Unmodified	_QEVAVKEQLT_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.8149902224541	2	572.814053	1143.61355	1.132	0.00064841	1.5771	0.00090337	2.709	0.0015518	572.8152633635319	38.401	0.18838	40.237	40.115	40.304	1.8366					9	5	2	0	0	0	0.77494	1	16098	16098		14.957	2.0846	1	585770			26672	5028	13194	13251	30669	30669					0.047490759522816006
QEWARRRRKR	10	Unmodified	_QEWARRRRKR_					0	0	0		ENST00000379660.4_1_6:8435667-8435706:-|nuORF	ENST00000379660.4_1_6:8435667-8435706:-|nuORF	ENST00000379660.4_1_6:8435667-8435706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2839233279228	3	481.283503	1440.82868	3.4154	0.0016438	-0.46862	-0.00022554	2.9468	0.0014182	481.28287493317043	88.925	1.4158	89.149	88.809	90.224	0.22359					101	43	3	0	0	0	0.89803	1	37525	37525		0.12286	0.028024	1	2949300			26673	6215	13195	13252	30670	30670					0.12589900051079894
QFDESKNVLI	10	Unmodified	_QFDESKNVLI_					0	0	0			REV__nc|ENSG00000140598|Q7Z2Z2-2|EFL1	REV__nc|ENSG00000140598|Q7Z2Z2-2|EFL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	596.7721435427666	2	596.814053	1191.61355	1.5027	0.00089683	0.62283	0.00037171	2.1255	0.0012685	596.8143894621143	58.701	0.22596	60.119	60.003	60.229	1.4181					9	6	2	0	0	0	0.12321	1	24617	24617		30.637	9.0996	1	627000	+		26674	10130	13196	13253	30671	30671					0.02541075952308347
QFDFLIDIV	9	Unmodified	_QFDFLIDIV_					0	0	0		ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952|NFYC	ENST00000467203.5_1_1:41157373-41224011:+|nuORF	ENST00000467203.5_1_1:41157373-41224011:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2956420779228	2	555.297507	1108.58046	1.0535	0.00058501	-3.5075	-0.0019477	-2.454	-0.0013627	555.2954896125073	58.543	0.37911	59.961	59.752	60.132	1.4181					29	11	3	0	0	0	0.39927	1	24563	24563		20.454	3.5113	1	3805900			26675	801	13197	13254	30672	30672					0.03051493900238711
QFDFLIDIV	9	Unmodified	_QFDFLIDIV_					0	0	0		ENST00000467203.5_1_1:41157373-41224011:+|nuORF;nc|ENSG00000066136|Q13952-4|NFYC;nc|ENSG00000066136|Q13952-6|NFYC;nc|ENSG00000066136|Q13952-7|NFYC;ENSG00000066136|ENST00000447388|NFYC;nc|ENSG00000066136|Q13952-5|NFYC;nc|ENSG00000066136|Q13952-3|NFYC;nc|ENSG00000066136|Q13952|NFYC	ENST00000467203.5_1_1:41157373-41224011:+|nuORF	ENST00000467203.5_1_1:41157373-41224011:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2927123904228	2	555.297507	1108.58046	0.88918	0.00049376	-2.5476	-0.0014147	-1.6584	-0.00092091	555.2953861408938	58.068	0.34273	60.037	59.871	60.214	1.969					20	10	3	0	0	0	0.27148	1	24328	24328		26.884	3.7352	1	4454000			26676	801	13197	13254	30673	30673					0.03051493900238711
QFDKTQAIS	9	Unmodified	_QFDKTQAIS_					0	0	0		nc|ENSG00000130787|O75146-2|HIP1R;ENST00000452196.6_1_12:123320097-123341792:+|nuORF;ENSG00000130787|ENST00000253083|HIP1R	nc|ENSG00000130787|O75146-2|HIP1R	nc|ENSG00000130787|O75146-2|HIP1R	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2692138552666	2	519.266739	1036.51892	2.9645	0.0015393	0.95323	0.00049498	3.9177	0.0020343	519.2672638854158	63.77	0.46317	65.698	65.425	65.888	1.928					45	14	4	0	0	0	0.11669	1	26704	26704		43.772	1.9328	1	8205000			26677	2461	13198	13255	30674	30674					0.002125622009543804
QFDPAFTDI	9	Unmodified	_QFDPAFTDI_					0	0	0		tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2513305544853	2	527.248015	1052.48148	3.0042	0.001584	3.3623	0.0017727	6.3665	0.0033567	527.2501932518298	63.81	0.46317	65.738	65.425	65.888	1.928					32	14	3	0	0	0	0.18809	1	26746	26746		34.402	2.0962	1	2618000			26678	16226	13199	13256	30675	30675					-0.042665290646709764
QFDPAFTDI	9	Unmodified	_QFDPAFTDI_					0	0	0		tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	527.248015	1052.48148	1.8763	0.00098928	3.8659	0.0020383	5.7422	0.0030276	527.2515889195242	65.889	0.35	65.889	65.708	66.058	0	0.12024	0.00035611	NaN	34.402	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	824150			26679	16226	13199	13256							-0.042665290646709764
QFDPAFTDI	9	Unmodified	_QFDPAFTDI_					0	0	0		tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	tr|A0A553SJ01|A0A553SJ01_NIACIAlanine--glyoxylateaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15840PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	527.248015	1052.48148	2.9294	0.0015445	3.0051	0.0015844	5.9345	0.0031289	527.249590328032	64.284	0.39881	65.692	65.466	65.865	1.4071	-0.076924	-0.00055164	NaN	34.402	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2518900			26680	16226	13199	13256							-0.042665290646709764
QFDPCTLPL	9	Unmodified	_QFDPCTLPL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.7913085818291	2	517.254785	1032.49502	3.0523	0.0015788	3.0508	0.001578	6.103	0.0031568	517.2564537130612	64.256	0.40012	65.663	65.401	65.801	1.4071					26	12	3	0	0	0	0.086272	1	26977	26977		24.021	0	1	702530	+		26681	11745	13200	13257	30676	30676					-0.01992994557053862
QFDPCTLPL	9	Unmodified	_QFDPCTLPL_					0	0	0			REV__ENSG00000198853|ENST00000361226|RUSC2	REV__ENSG00000198853|ENST00000361226|RUSC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.7910644412041	2	517.254785	1032.49502	2.9988	0.0015511	3.4871	0.0018037	6.4858	0.0033548	517.7579961585519	63.658	0.33884	65.592	65.462	65.801	1.9337					19	10	2	0	0	0	0.071872	1	26718	26718		24.021	0	1	666490	+		26682	11745	13200	13257	30677	30677					-0.01992994557053862
QFDPFTIAV	9	Unmodified	_QFDPFTIAV_					0	0	0			REV__CON__P01045-1	REV__CON__P01045-1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2691528201103	2	519.26875	1036.52295	3.0767	0.0015976	-2.88	-0.0014955	0.19666	0.00010212	519.2672140701499	64.268	0.48946	65.675	65.433	65.923	1.4071					44	15	4	0	0	0	0.079895	1	26917	26917		56.177	2.3442	1	7323400	+	+	26683	8377	13201	13258	30678	30678					0.006146516946728298
QFDPFTIAV	9	Unmodified	_QFDPFTIAV_					0	0	0			REV__CON__P01045-1	REV__CON__P01045-1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2685424685478	2	519.26875	1036.52295	2.9644	0.0015393	-2.9202	-0.0015164	0.044196	2.295E-05	519.2672638854158	63.77	0.46317	65.698	65.425	65.888	1.928					45	14	4	0	0	0	0.049839	1	26756	26756		68.081	15.812	1	8205000	+	+	26684	8377	13201	13258	30679	30679					0.006146516946728298
QFDVPEYSS	9	Unmodified	_QFDVPEYSS_					0	0	0		nc|ENSG00000177125|Q8NCN2|ZBTB34;ENSG00000177125|ENST00000319119|ZBTB34	nc|ENSG00000177125|Q8NCN2|ZBTB34	nc|ENSG00000177125|Q8NCN2|ZBTB34	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	357.8274413943291	3	357.825828	1070.45566	-0.98273	-0.00035164	2.3971	0.00085774	1.4144	0.0005061	357.82752540121635	65.913	0.34939	65.913	65.676	66.025	0					28	10	3	0	0	0	0.51189	1	27447	27447		10.151	0	1	1907300			26685	4437	13202	13259	30680	30680					-0.07675423306955054
QFEQLRQRLHF	11	Unmodified	_QFEQLRQRLHF_					0	0	0			REV__chr20:130056-145579|234|22.45|0.0|12.74|+|1|TE_info:L1PA2,L1PA2_dup4777,L1,LINE,donor,+,129965,130056|None,DEFB126|2	REV__chr20:130056-145579|234|22.45|0.0|12.74|+|1|TE_info:L1PA2,L1PA2_dup4777,L1,LINE,donor,+,129965,130056|None,DEFB126|2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	300.8499938845634	5	301.166272	1500.79498	-2.2778	-0.000686	-0.19095	-5.7507E-05	-2.4688	-0.00074351	301.36737932638874	41.344	0.67564	41.344	41.113	41.789	0					28	20	2	0	0	0	0.14606	1	17346	17346		0.50596	0	1	573220	+		26686	8304	13203	13260	30681	30681					0.0646143376868622
QFEQLRQRLHF	11	Unmodified	_QFEQLRQRLHF_					0	0	0			REV__chr20:130056-145579|234|22.45|0.0|12.74|+|1|TE_info:L1PA2,L1PA2_dup4777,L1,LINE,donor,+,129965,130056|None,DEFB126|2	REV__chr20:130056-145579|234|22.45|0.0|12.74|+|1|TE_info:L1PA2,L1PA2_dup4777,L1,LINE,donor,+,129965,130056|None,DEFB126|2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	300.8504211306572	5	301.166272	1500.79498	1.0449	0.00031469	-1.9508	-0.00058753	-0.90595	-0.00027284	301.36715891878333	39.278	0.57391	40.574	40.35	40.924	1.2961					25	18	2	0	0	0	0.14606	1	16448	16448		0.50596	0	1	621720	+		26687	8304	13203	13260	30682	30682					0.0646143376868622
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5235778689384	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.028	1	28.028	27.528	28.528	0								0	0	0	0.42693	1	11728	11728		0.86438	0.23755	1		+		26688	8575	13204	13261	30683	30683					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5247985720634	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.586	1	28.586	28.086	29.086	0								0	0	0	0.42693	1	11962	11962		0.86438	0.16671	1		+		26689	8575	13204	13261	30684	30684					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5246765017509	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.784	1	29.784	29.284	30.284	0								0	0	0	0.42693	1	12469	12469		0.86438	0.35842	1		+		26690	8575	13204	13261	30685	30685					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5246154665947	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.03	1	30.03	29.53	30.53	0								0	0	0	0.42693	1	12574	12574		0.86438	0.23755	1		+		26691	8575	13204	13261	30686	30686					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5248290896416	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.367	1	30.367	29.867	30.867	0								0	0	0	0.42693	1	12716	12716		0.86438	0.087843	1		+		26692	8575	13204	13261	30687	30687					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5251037478447	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.584	1	30.584	30.084	31.084	0								0	0	0	0.42693	1	12809	12809		0.86438	0.16671	1		+		26693	8575	13204	13261	30688	30688					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5247985720634	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.068	1	31.068	30.568	31.568	0								0	0	0	0.42693	1	13015	13015		0.86438	0.35842	1		+		26694	8575	13204	13261	30689	30689					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5247375369072	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.68	1	32.68	32.18	33.18	0								0	0	0	0.42693	1	13692	13692		0.86438	0.40604	1		+		26695	8575	13204	13261	30690	30690					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5246765017509	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.511	1	26.773	26.273	27.273	0.26173								0	0	0	0.42693	1	11084	11084		0.86438	0.087843	1		+		26696	8575	13204	13261	30691	30691					-0.05063320169892904
QFESDYRRN	9	Unmodified	_QFESDYRRN_					0	0	0			REV__nc|ENSG00000030110|Q16611-2|BAK1	REV__nc|ENSG00000030110|Q16611-2|BAK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.5248901247978	3	405.523143	1213.5476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.329	1	28.6	28.1	29.1	0.27119								0	0	0	0.42693	1	11850	11850		0.86438	0.23755	1		+		26697	8575	13204	13261	30692	30692					-0.05063320169892904
QFFISKILYVI	11	Unmodified	_QFFISKILYVI_					0	0	0		ENST00000306467.9_1_5:122682076-122682145:-|nuORF	ENST00000306467.9_1_5:122682076-122682145:-|nuORF	ENST00000306467.9_1_5:122682076-122682145:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	458.2652770876884	3	457.607596	1369.80096	2.5272	0.0011565	1.033	0.00047272	3.5602	0.0016292	457.9424121191446	84.202	1.3615	85.819	85.174	86.535	1.6169					69	44	2	0	0	0	0.14606	1	35597	35597		0.40827	0	1	3396400			26698	5780	13205	13262	30693	30693					0.13085139227655418
QFFKKRVRRWI	11	Unmodified	_QFFKKRVRRWI_					0	0	0		ENSG00000118515|ENST00000367858|SGK1	ENSG00000118515|ENST00000367858|SGK1	ENSG00000118515|ENST00000367858|SGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.3817626833916	3	521.984283	1562.93102	4.2702	0.002229	0.9144	0.0004773	5.1846	0.0027063	521.984994540884	91.755	1.1854	92.691	91.897	93.082	0.93623					48	37	2	0	0	0	0.14606	1	38804	38804		0	0	1	1636200			26699	2039	13206	13263	30694	30694					0.17207173070028148
QFFKKRVRRWI	11	Unmodified	_QFFKKRVRRWI_					0	0	0		ENSG00000118515|ENST00000367858|SGK1	ENSG00000118515|ENST00000367858|SGK1	ENSG00000118515|ENST00000367858|SGK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.9855224490166	3	521.984283	1562.93102	3.3841	0.0017665	1.9543	0.0010201	5.3384	0.0027866	521.9852029327747	91.254	1.034	92.62	91.994	93.028	1.366					68	32	3	0	0	0	1.0393	1	38459	38459		0.094841	0	1	1389000			26700	2039	13206	13263	30695	30695					0.17207173070028148
QFHIVPRI	8	Unmodified	_QFHIVPRI_					0	0	0			REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3020202517509	2	505.300719	1008.58688	2.1575	0.0010902	2.4501	0.0012381	4.6076	0.0023282	505.30188513175364	43.585	0.45519	44.939	44.677	45.132	1.3536					34	14	3	0	0	0	0.5808	1	18275	18275		42.095	3.9434	1	5524600	+		26701	10959	13207	13264	30696	30696					0.08293476642290898
QFHIVPRI	8	Unmodified	_QFHIVPRI_					0	0	0			REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3023559451103	2	505.300719	1008.58688	1.8322	0.00092579	2.3866	0.001206	4.2188	0.0021318	505.3017651333909	42.932	0.44827	44.853	44.601	45.049	1.9211					32	14	3	0	0	0	0.66196	1	17998	17998		34.102	1.9855	1	6751200	+		26702	10959	13207	13264	30697	30697					0.08293476642290898
QFHIVPRI	8	Unmodified	_QFHIVPRI_					0	0	0			REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	REV__nc|ENSG00000169758|Q2M3C6-2|TMEM266	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	505.300719	1008.58688	2.1575	0.0010902	2.4501	0.0012381	4.6076	0.0023282	505.30188513175364	43.585	0.45519	44.939	44.677	45.132	1.3536	0.042619	3.188E-05	NaN	42.095	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5524600	+		26703	10959	13207	13264							0.08293476642290898
QFIILFRKF	9	Unmodified	_QFIILFRKF_					0	0	0			REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3704711794853	2	606.368601	1210.72265	3.4442	0.0020885	0.65314	0.00039605	4.0973	0.0024845	606.3687378305891	73.878	1.2105	75.196	74.558	75.768	1.318					93	38	3	0	0	0	0.83213	2	31107	31107;31185		2.0598	0.21551	1	2218100	+		26704	13218	13208	13265	30698;30699	30698					0.1257175143305176
QFIILFRKF	9	Unmodified	_QFIILFRKF_					0	0	0			REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3710815310478	2	606.368601	1210.72265	2.7705	0.0016799	1.2008	0.00072812	3.9713	0.0024081	606.3692668260397	73.66	1.1487	75.456	74.689	75.838	1.7962					69	36	3	0	0	0	0.83213	2	30858	30858;30907		2.0598	0	1	1747200	+		26705	13218	13208	13265	30700;30701	30700					0.1257175143305176
QFIILFRKF	9	Unmodified	_QFIILFRKF_					0	0	0			REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	REV__ENST00000463724.1_1_1:74648194-74648635:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	606.368601	1210.72265	2.7705	0.0016799	1.2008	0.00072812	3.9713	0.0024081	606.3692668260397	73.66	1.1487	75.456	74.689	75.838	1.7962	0.28096	0.00093181	NaN	2.0598	69	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1747200	+		26706	13218	13208	13265							0.1257175143305176
QFITSTNTF	9	Unmodified	_QFITSTNTF_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7623168826103	2	529.761289	1057.50803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.448	1	48.419	47.919	48.919	1.9703								0	0	0	0.32813	1	19457	19457		15.847	1.9411	1				26707	4569	13209	13266	30702	30702					-0.018428401733444844
QFLGQMCLEF	10	Unmodified	_QFLGQMCLEF_					0	0	0			REV__ENST00000554859.1_1_14:102263222-102276628:-|nuORF	REV__ENST00000554859.1_1_14:102263222-102276628:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.2805053591728	2	608.280477	1214.5464	1.7792	0.0010822	-0.24964	-0.00015185	1.5295	0.00093039	608.2796700526875	41.712	0.44562	43.605	43.413	43.859	1.8927					29	13	3	0	0	0	0.76954	1	17508	17508		15.248	0.8431	1	1651800	+		26708	13860	13210	13267	30703	30703					-0.05228993854689179
QFNTLSTTF	9	Unmodified	_QFNTLSTTF_					0	0	0			REV__nc|ENSG00000079950|O15400-2|STX7	REV__nc|ENSG00000079950|O15400-2|STX7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7646362185478	2	529.761289	1057.50803	2.0211	0.0010707	1.8349	0.00097203	3.8559	0.0020427	529.7616901765033	46.869	0.16059	48.251	48.122	48.283	1.3825					10	4	3	0	0	0	0.70108	1	19606	19606		7.2892	0.93513	1	492060	+		26709	8802	13211	13268	30704	30704					-0.018428401733444844
QFPSHSATPF	10	Unmodified	_QFPSHSATPF_					0	0	0			REV__nc|ENSG00000173744|P52594-3|AGFG1	REV__nc|ENSG00000173744|P52594-3|AGFG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.5139343142509	3	373.513696	1117.51926	0.23175	8.6561E-05	0.3024	0.00011295	0.53415	0.00019951	373.51376107199	23.032	0.34003	24.683	24.498	24.838	1.6511					17	10	2	0	0	0	0.79268	1	9630	9630		7.9454	2.5427	1	1768500	+		26710	11109	13212	13269	30705	30705					-0.03480018079198999
QFQFRFRRWNC	11	Unmodified	_QFQFRFRRWNC_					0	0	0		ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	794.3901244997978	2	794.391136	1586.76772	0.11262	8.9463E-05	-2.9948	-0.002379	-2.8822	-0.0022896	794.3895530887935	21.724	0.25572	23.34	23.171	23.427	1.6158					23	8	3	0	0	0	1.0131	1	9058	9058		2.9952	0	1	3926100			26711	1929	13213	13270	30706	30706					-0.0021937304331913765
QFQFRFRRWNC	11	Unmodified	_QFQFRFRRWNC_					0	0	0		ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	794.391136	1586.76772	1.0212	0.0008112	-1.0619	-0.00084357	-0.040746	-3.2368E-05	794.3899822292309	22.902	0.23589	22.902	22.78	23.016	0	-0.24967	0.0024755	NaN	2.9952	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1283700			26712	1929	13213	13270							-0.0021937304331913765
QFQFRFRRWNC	11	Unmodified	_QFQFRFRRWNC_					0	0	0		ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	ENSG00000115596|ENST00000233948|WNT6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	794.391136	1586.76772	0.73996	0.00058782	-1.7847	-0.0014178	-1.0448	-0.00082994	794.3906276636931	22.884	0.27487	23.117	22.975	23.25	0.23306	-0.033812	0.0013271	NaN	2.9952	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1545900			26713	1929	13213	13270							-0.0021937304331913765
QFQLIHKRRAT	11	Unmodified	_QFQLIHKRRAT_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.6100036501884	3	466.608993	1396.80515	2.8575	0.0013333	-1.4321	-0.00066821	1.4255	0.00066513	466.60804134969914	85.084	1.703	85.084	84.399	86.103	0					87	53	2	0	0	0	1.0254	1	35411	35411		2.2527	1.0379	1	1342500			26714	1168	13214	13271	30707	30707					0.12262041493931974
QFQSSQLVT	9	Unmodified	_QFQSSQLVT_					0	0	0		tr|A0A553SIZ7|A0A553SIZ7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15800PE=4SV=1	tr|A0A553SIZ7|A0A553SIZ7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15800PE=4SV=1	tr|A0A553SIZ7|A0A553SIZ7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15800PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1402465701103	2	519.266739	1036.51892	2.088	0.0010842	1.452	0.000754	3.5401	0.0018382	519.2675442798796	65.419	0.44376	65.746	65.517	65.96	0.32689					33	13	3	0	0	0	0.11833	1	27480	27480		4.3292	0	1	2686200			26715	16225	13215	13272	30708	30708					0.0021256220097711775
QFRFRRFRLHS	11	Unmodified	_QFRFRRFRLHS_					0	0	0			REV__ENSG00000006194|ENST00000219069|ZNF263	REV__ENSG00000006194|ENST00000219069|ZNF263	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6270019412041	3	517.291887	1548.85383	3.3618	0.001739	-1.1584	-0.00059922	2.2034	0.0011398	517.2922090459775	112.93	7.1858	113.1	112.98	120.16	0.16914					441	222	2	0	0	0	1.0402	1	50167	50167		0.094841	0	1	11283000	+		26716	8506	13216	13273	30709	30709					0.10135954853694784
QFRWLWQGPKW	11	Unmodified	_QFRWLWQGPKW_					0	0	0			REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2701904177666	3	511.270089	1530.78844	0.71216	0.00036411	-3.2451	-0.0016591	-2.533	-0.001295	511.26829336937385	16.816	0.15968	17.714	17.657	17.816	0.89794					9	5	2	0	0	0	1.0402	1	7007	7007		0.094841	0.011491	1	399480	+		26717	8252	13217	13274	30710	30710					0.044275406079577806
QFRWLWQGPKW	11	Unmodified	_QFRWLWQGPKW_					0	0	0			REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	511.270089	1530.78844	0.6103	0.00031203	-4.1942	-0.0021444	-3.5839	-0.0018324	511.6020321966094	17.642	0.15302	17.814	17.739	17.892	0.17285	0.050176	-0.00029558	NaN	0.094841	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	638340	+		26718	8252	13217	13274							0.044275406079577806
QFRWLWQGPKW	11	Unmodified	_QFRWLWQGPKW_					0	0	0			REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54283162-54284258|429|46.08|0.0|22.14|+|1|HNRNPA1,HNRNPA1|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	511.270089	1530.78844	0.71216	0.00036411	-3.2451	-0.0016591	-2.533	-0.001295	511.26829336937385	16.816	0.15968	17.714	17.657	17.816	0.89794	-0.050176	0.0011602	NaN	0.094841	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	399480	+		26719	8252	13217	13274							0.044275406079577806
QFVFRTRRR	9	Unmodified	_QFVFRTRRR_					0	0	0			REV__ENSG00000172732|ENST00000308110|MUS81	REV__ENSG00000172732|ENST00000308110|MUS81	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3655273318291	2	633.37053	1264.72651	2.0542	0.001301	-3.0038	-0.0019025	-0.94966	-0.00060149	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	0.85019	2	32891	32891;33176		0.52476	0.066424	1	2722600	+		26720	11072	13218	13275	30711;30712	30711					0.10473233979519136
QFVFRTRRR	9	Unmodified	_QFVFRTRRR_					0	0	0			REV__ENSG00000172732|ENST00000308110|MUS81	REV__ENSG00000172732|ENST00000308110|MUS81	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3696777224541	2	633.37053	1264.72651	1.6313	0.0010332	-1.525	-0.00096591	0.10622	6.7277E-05	633.369142933459	79.157	1.5931	79.458	78.444	80.037	0.30047					112	50	3	0	0	0	0.85019	4	32988	32988;33037;33139;33193		0.52476	0.066424	1	3402400	+		26721	11072	13218	13275	30713;30714;30715;30716	30713					0.10473233979519136
QFVFRTRRR	9	Unmodified	_QFVFRTRRR_					0	0	0			REV__ENSG00000172732|ENST00000308110|MUS81	REV__ENSG00000172732|ENST00000308110|MUS81	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3725463747978	2	633.37053	1264.72651	1.9685	0.0012468	-2.434	-0.0015416	-0.46554	-0.00029486	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	0.85019	2	34455	34455;34588		0.52476	0.066424	1	7751600	+		26722	11072	13218	13275	30717;30718	30717					0.10473233979519136
QFVGYDCR	8	Unmodified	_QFVGYDCR_					0	0	0			REV__sp|P09722|US22_HCMVAEarlynuclearproteinHWLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=US22PE=3SV=2	REV__sp|P09722|US22_HCMVAEarlynuclearproteinHWLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=US22PE=3SV=2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2233764529228	2	494.221277	986.428001	1.8026	0.00089089	0.85199	0.00042107	2.6546	0.001312	494.2219030884929	67.636	0.46776	69.506	69.268	69.736	1.87					79	14	9	0	0	0	0.87701	1	28331	28331		10.824	0	1	20905000	+		26723	14641	13219	13276	30719	30719					-0.06575605048169564
QFVKSVRR	8	Unmodified	_QFVKSVRR_					0	0	0		chr6:34293535-34341862|130|16.64|0.53|4.98|-|1|RPS10-NUDT3,RPS10-NUDT3|1	chr6:34293535-34341862|130|16.64|0.53|4.98|-|1|RPS10-NUDT3,RPS10-NUDT3|1	chr6:34293535-34341862|130|16.64|0.53|4.98|-|1|RPS10-NUDT3,RPS10-NUDT3|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8047363162041	2	510.309075	1018.6036	1.9542	0.00099724	0.90775	0.00046323	2.8619	0.0014605	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.89178	1	27860	27860		0.69038	0	1	98417000			26724	274	13220	13277	30720	30720					0.09503977528231644
QFVPKSHLF	9	Unmodified	_QFVPKSHLF_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2071716189384	3	368.206315	1101.59712	0.51497	0.00018961	0.6355	0.00023399	1.1505	0.00042361	368.2065846701754	31.681	0.2574	33.505	33.358	33.616	1.8246					18	10	2	0	0	0	0.52273	1	13286	13286		14.405	5.0223	1	1763400			26725	782	13221	13278	30721	30721					0.05038039576857045
QFVPKSHLF	9	Unmodified	_QFVPKSHLF_					0	0	0		WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant;ENSG00000065183|ENST00000349139|WDR3	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	WDR3|p.R930Gfs*9|1|0.09|ENSG00000065183|chr1:117959402-117959402|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	368.206315	1101.59712	-0.41808	-0.00015394	-0.12227	-4.5021E-05	-0.54035	-0.00019896	368.2063608824294	32.267	0.31741	33.545	33.385	33.702	1.2782	0.019929	-0.00048277	NaN	14.405	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1181900			26726	782	13221	13278							0.05038039576857045
QGAAVGDP	8	Unmodified	_QGAAVGDP_					0	0	0			REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	714.3430663943291	1	714.341694	713.334418	1.4069	0.001005	3.9337	0.00281	5.3406	0.003815	714.3441991181913	103.94	0.1133	103.94	103.88	103.99	0					9	5	2	0	0	0	0.89178	1	43764	43764		0.69038	0	1	24624000	+		26727	14670	13222	13279	30722	30722					-0.033715811589445366
QGAAVGDP	8	Unmodified	_QGAAVGDP_					0	0	0			REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	714.341694	713.334418	1.4069	0.001005	3.9337	0.00281	5.3406	0.003815	714.3441991181913	103.94	0.1133	103.94	103.88	103.99	0	-0.045443	0.00072506	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24624000	+		26728	14670	13222	13279							-0.033715811589445366
QGAAVGDP	8	Unmodified	_QGAAVGDP_					0	0	0			REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	714.341694	713.334418	2.7041	0.0019317	4.8785	0.0034849	7.5826	0.0054165	714.3447991098428	103.92	0.11298	103.98	103.9	104.01	0.059502	-0.0057357	0.0013999	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22758000	+		26729	14670	13222	13279							-0.033715811589445366
QGAAVGDP	8	Unmodified	_QGAAVGDP_					0	0	0			REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	REV__SVA_C_dup306|chr11:76581923-76583356:-|1.005766169199819|0.0397377111360499|4.66|411.0|53|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	714.341694	713.334418	2.6491	0.0018924	-0.96853	-0.00069186	1.6806	0.0012005	714.3416970287719	103.88	0.060852	104.04	104.01	104.07	0.16055	0.051178	-0.0027768	NaN	0.69038	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13362000	+		26730	14670	13222	13279							-0.033715811589445366
QGCAGEGK	8	Unmodified	_QGCAGEGK_					0	0	0		ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	ENST00000337451.7_1_15:23034150-23034375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	749.3962890505791	1	749.324664	748.317388	1.3561	0.0010162	1.4652	0.0010979	2.8214	0.0021141	749.3258596756151	108.45	0.10461	108.45	108.38	108.48	0					5	4	2	0	0	0	2.3239	1	46742	46742		2.0598	0	1	8289900			26731	5922	13223	13280	30723	30723					-0.06683825036395774
QGCAGGEK	8	Unmodified	_QGCAGGEK_					0	0	0			REV__ENST00000433239.6_1_7:117854731-117854842:+|nuORF	REV__ENST00000433239.6_1_7:117854731-117854842:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	749.3960449099541	1	749.324664	748.317388	2.7241	0.0020412	-0.40275	-0.00030179	2.3213	0.0017394	749.3239491356802	108.42	0.089973	108.47	108.42	108.51	0.050644					6	4	2	0	0	0	2.3239	1	46625	46625		2.0598	0	1	6650500	+		26732	13038	13224	13281	30724	30724					-0.06683825036407143
QGCCHGTDC	9	Unmodified	_QGCCHGTDC_					0	0	0			REV__WBP1L|p.C61Sfs*21|1|0.08|ENSG00000166272|chr10:102809944-102809944|G/-|frameshift_variant	REV__WBP1L|p.C61Sfs*21|1|0.08|ENSG00000166272|chr10:102809944-102809944|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1460449099541	2	462.143855	922.273156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.034	1	74.363	73.863	74.863	1.3297								0	0	0	0.42693	1	30652	30652		2.0598	1.2661	1		+		26733	10815	13225	13282	30725	30725					-0.19108920516544003
QGDRMELTI	9	Unmodified	_QGDRMELTI_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7665283083916	2	531.766049	1061.51754	1.6175	0.00086013	-1.2026	-0.0006395	0.41489	0.00022063	531.7648523204502	54.852	0.37999	56.256	56.09	56.47	1.4048					21	12	2	0	0	0	0.32838	1	22967	22967		24.021	0.87215	1	1828800	+		26734	8794	13226	13283	30726	30726					-0.010753951594551836
QGDRMELTI	9	Unmodified	_QGDRMELTI_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	531.766049	1061.51754	1.6175	0.00086013	-1.2026	-0.0006395	0.41489	0.00022063	531.7648523204502	54.852	0.37999	56.256	56.09	56.47	1.4048	-0.082631	0.00019266	NaN	24.021	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1828800	+		26735	8794	13226	13283							-0.010753951594551836
QGDRMELTI	9	Unmodified	_QGDRMELTI_					0	0	0			REV__nc|ENSG00000078900|O15350-12|TP73	REV__nc|ENSG00000078900|O15350-12|TP73	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	531.766049	1061.51754	2.2418	0.0011921	-1.5254	-0.00081115	0.71644	0.00038098	531.7651054782434	54.453	0.39576	56.422	56.16	56.556	1.9684	0.082631	-0.00015065	NaN	24.021	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1887700	+		26736	8794	13226	13283							-0.010753951594551836
QGEETPTQL	9	Unmodified	_QGEETPTQL_					0	0	0			REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	REV__nc|ENSG00000143382|Q6UY14-2|ADAMTSL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7439453005791	2	501.740554	1001.46655	1.9725	0.00098967	0.16806	8.4325E-05	2.1405	0.001074	501.7409596059806	63.068	0.81265	65.012	64.532	65.345	1.9444					62	25	4	0	0	0	0.68551	1	26382	26382		7.9102	0	1	6830800	+		26737	10209	13227	13284	30727	30727					-0.03412020932660198
QGFPNRVVF	9	Unmodified	_QGFPNRVVF_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2893554568291	2	532.287808	1062.56106	2.3267	0.0012385	0.54643	0.00029086	2.8731	0.0015293	532.288170246637	44.131	0.75343	45.485	45.071	45.824	1.3536					78	23	5	0	0	0	7.2896E-05	6	18531	18404;18454;18492;18531;18570;18610		147.83	69.847	1	61593000			26738	1266	13228	13285	30728;30729;30730;30731;30732;30733	30731					0.03228582399970037
QGFPNRVVF	9	Unmodified	_QGFPNRVVF_					0	0	0		MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2893554568291	2	532.287808	1062.56106	2.3237	0.0012369	-1.3593	-0.00072352	0.96443	0.00051335	532.2871153393434	43.467	0.72716	45.411	45.072	45.799	1.9438					78	23	4	0	0	0	7.2896E-05	5	18144	18144;18191;18241;18292;18330		147.83	69.847	1	56441000			26739	1266	13228	13285	30734;30735;30736;30737;30738	30734					0.03228582399970037
QGFTGKTV	8	Unmodified	_QGFTGKTV_					0	0	0			REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	REV__nc|ENSG00000197969|Q96RL7-3|VPS13A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3172180056572	2	419.226885	836.439217	3.3838	0.0014186	-0.31471	-0.00013193	3.0691	0.0012866	419.2267453741802	73.11	0.50166	74.44	74.133	74.634	1.3297					19	15	2	0	0	0	2.3239	1	30662	30662		9.3474	0	1	476510	+		26740	11696	13229	13286	30739	30739					0.014455403176043546
QGFYLKTF	8	Unmodified	_QGFYLKTF_					0	0	0			REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2674743533134	2	502.26601	1002.51747	4.5002	0.0022603	-1.2669	-0.00063631	3.2333	0.001624	502.26544984755753	87.335	0.46312	88.426	88.148	88.612	1.0918					33	14	3	0	0	0	0.7528	2	36807	36807;36860		25.399	4.9457	1	3516600	+		26741	10551	13230	13287	30740;30741	30740					0.016309729028421316
QGFYLKTF	8	Unmodified	_QGFYLKTF_					0	0	0			REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2678710818291	2	502.26601	1002.51747	4.2897	0.0021546	-0.73932	-0.00037133	3.5504	0.0017832	502.26587003736444	86.811	0.42971	88.306	88.151	88.581	1.4953					21	13	2	0	0	0	0.67986	1	36600	36600		32.305	6.9062	1	2172400	+		26742	10551	13230	13287	30742	30742					0.016309729028421316
QGFYLKTF	8	Unmodified	_QGFYLKTF_					0	0	0			REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.26601	1002.51747	4.5002	0.0022603	-1.2669	-0.00063631	3.2333	0.001624	502.26544984755753	87.335	0.46312	88.426	88.148	88.612	1.0918	0.060084	-0.00027811	NaN	32.305	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3516600	+		26743	10551	13230	13287							0.016309729028421316
QGFYLKTF	8	Unmodified	_QGFYLKTF_					0	0	0			REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	REV__nc|ENSG00000158220|A0FGR9-2|ESYT3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	502.26601	1002.51747	4.2897	0.0021546	-0.73932	-0.00037133	3.5504	0.0017832	502.26587003736444	86.811	0.42971	88.306	88.151	88.581	1.4953	-0.060084	0.00025185	NaN	32.305	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2172400	+		26744	10551	13230	13287							0.016309729028421316
QGGGGGGANG	10	Unmodified	_QGGGGGGANG_					0	0	0		ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	731.3074218630791	1	731.306706	730.299429	1.3822	0.0010108	-0.96118	-0.00070291	0.42106	0.00030793	731.3062920586935	104.98	0.074417	104.98	104.94	105.01	0					5	3	2	0	0	0	0.89803	1	44466	44466		0	0	1	20201000			26745	4877	13231	13288	30743	30743					-0.07650823966901044
QGGGGGGANG	10	Unmodified	_QGGGGGGANG_					0	0	0		ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	731.306706	730.299429	2.7137	0.0019846	-3.9896	-0.0029176	-1.2758	-0.00093301	731.3040038025644	104.94	0.058594	104.99	104.97	105.02	0.056801	-0.022595	-0.0012019	NaN	0	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12628000			26746	4877	13231	13288							-0.07650823966901044
QGGGGGGANG	10	Unmodified	_QGGGGGGANG_					0	0	0		ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	ENSG00000188779|ENST00000380035|SKOR1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	731.306706	730.299429	2.5325	0.001852	-3.64	-0.0026619	-1.1075	-0.00080993	731.3048440301867	104.91	0.076012	105.07	105.03	105.1	0.15859	0.055064	-0.00094628	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14130000			26747	4877	13231	13288							-0.07650823966901044
QGGINLNILL	10	Unmodified	_QGGINLNILL_					0	0	0		ENST00000472424.1_1_1:82447552-82452975:+|nuORF	ENST00000472424.1_1_1:82447552-82452975:+|nuORF	ENST00000472424.1_1_1:82447552-82452975:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.8168823122978	2	527.816399	1053.61824	1.8837	0.00099422	0.4029	0.00021266	2.2866	0.0012069	527.8161816806618	45.058	0.31126	47.017	46.896	47.207	1.9596					16	9	2	0	0	0	0.78468	1	18873	18873		13.906	0.39817	1	901550			26748	6750	13232	13289	30744	30744					0.09358004885712035
QGGMWGTW	8	Unmodified	_QGGMWGTW_					0	0	0			REV__ENST00000417509.5_1_7:75616545-75617528:-|nuORF	REV__ENST00000417509.5_1_7:75616545-75617528:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.1339599490166	3	308.134051	921.380322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.753	1	56.158	55.658	56.658	1.4048								0	0	0	1.0178	1	22914	22914		0.45834	0	1		+		26749	12953	13233	13290	30745	30745					-0.0835125924836575
QGGMWGTW	8	Unmodified	_QGGMWGTW_					0	0	0			REV__ENST00000417509.5_1_7:75616545-75617528:-|nuORF	REV__ENST00000417509.5_1_7:75616545-75617528:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.1339904665947	3	308.134051	921.380322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.994	1	56.399	55.899	56.899	1.4048								0	0	0	1.0178	1	23021	23021		0.45834	0	1		+		26750	12953	13233	13290	30746	30746					-0.0835125924836575
QGHLLALA	8	Unmodified	_QGHLLALA_					0	0	0			REV__ENST00000602529.1_1_1:228463255-228463756:-|nuORF	REV__ENST00000602529.1_1_1:228463255-228463756:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	822.4863159060478	1	822.483214	821.475937	2.9732	0.0024454	-1.4884	-0.0012242	1.4848	0.0012212	822.4819854382332	104.55	0.28682	104.72	104.58	104.87	0.1731					26	14	2	0	0	0	0.89178	1	44242	44242		0.69038	0	1	16890000	+		26751	14119	13234	13291	30747	30747					0.05805836934166564
QGKCLAAT	8	Unmodified	_QGKCLAAT_					0	0	0		nc|ENSG00000100626|Q8N428-2|GALNT16;ENSG00000100626|ENST00000448469|GALNT16	nc|ENSG00000100626|Q8N428-2|GALNT16	nc|ENSG00000100626|Q8N428-2|GALNT16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	395.7979919314384	2	396.207638	790.400723	-0.41143	-0.00016301	-1.9812	-0.00078496	-2.3926	-0.00094797	396.208060921661	107.96	0.14957	107.96	107.88	108.03	0					13	7	3	0	0	0	2.3239	1	46387	46387		0	0	1	20990000			26752	1294	13235	13292	30748	30748					-0.0028608858857523956
QGKKTEQNLI	10	Unmodified	_QGKKTEQNLI_					0	0	0			REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8277465701103	2	579.827495	1157.64044	0.77854	0.00045142	0.0095381	5.5304E-06	0.78808	0.00045695	579.8275227814781	19.693	0.40878	19.693	19.508	19.917	0					31	12	4	0	0	0	0.84303	1	8170	8170		7.609	0.88579	1	3780200	+		26753	12901	13236	13293	30749	30749					0.06792184563482806
QGKKTEQNLI	10	Unmodified	_QGKKTEQNLI_					0	0	0			REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8277465701103	2	579.827495	1157.64044	0.43463	0.00025201	-0.05569	-3.2291E-05	0.37894	0.00021972	579.8274099552119	19.293	0.69822	19.486	19.294	19.992	0.19342					48	22	4	0	0	0	0.65659	2	8030	7987;8030		20.415	1.8771	1	4732800	+		26754	12901	13236	13293	30750;30751	30751					0.06792184563482806
QGKKTEQNLI	10	Unmodified	_QGKKTEQNLI_					0	0	0			REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8278686404228	2	579.827495	1157.64044	0.52182	0.00030257	-0.10429	-6.0472E-05	0.41753	0.0002421	579.8273278171765	18.639	0.39403	19.618	19.44	19.834	0.97922					30	13	3	0	0	0	0.81347	2	7768	7719;7768		10.8	1.8771	1	3936800	+		26755	12901	13236	13293	30752;30753	30753					0.06792184563482806
QGKKTEQNLI	10	Unmodified	_QGKKTEQNLI_					0	0	0			REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	REV__ENST00000406807.2_1_6:149812705-149813218:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8276855349541	2	579.827495	1157.64044	0.30132	0.00017471	0.77596	0.00044992	1.0773	0.00062463	579.8276856277087	18.149	0.3827	19.597	19.375	19.758	1.448					31	12	3	0	0	0	0.80702	1	7503	7503		11.495	2.1116	1	3692500	+		26756	12901	13236	13293	30754	30754					0.06792184563482806
QGKRRKHLT	9	Unmodified	_QGKRRKHLT_					0	0	0		ENST00000356352.6_1_10:12071104-12071191:-|nuORF	ENST00000356352.6_1_10:12071104-12071191:-|nuORF	ENST00000356352.6_1_10:12071104-12071191:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3442870974541	2	562.343981	1122.67341	3.5543	0.0019987	-1.5568	-0.00087549	1.9975	0.0011233	562.3426998675459	73.445	0.75392	74.763	74.494	75.248	1.318					28	23	2	0	0	0	0.77526	1	30833	30833		4.3292	0.38484	1	879220			26757	5986	13237	13294	30755	30755					0.11697856196815337
QGKTKQPI	8	Unmodified	_QGKTKQPI_					0	0	0			REV__ENSG00000255393|ENST00000642343|OOSP4B	REV__ENSG00000255393|ENST00000642343|OOSP4B	MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2695800662041	2	450.269084	898.523616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.06	1	101.24	100.74	101.74	0.18047								0	0	0	1.0178	1	42526	42526		2.3027	0	1		+		26758	11971	13238	13295	30756	30756					0.07029491134358068
QGKTKQPI	8	Unmodified	_QGKTKQPI_					0	0	0			REV__ENSG00000255393|ENST00000642343|OOSP4B	REV__ENSG00000255393|ENST00000642343|OOSP4B	MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2713500857353	2	450.269084	898.523616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.18	1	101.36	100.86	101.86	0.17825								0	0	0	1.0178	1	42575	42575		2.3027	0	1		+		26759	11971	13238	13295	30757	30757					0.07029491134358068
QGLKQLVTLYF	11	Unmodified	_QGLKQLVTLYF_					0	0	0			REV__ENSG00000158125|ENST00000379416|XDH	REV__ENSG00000158125|ENST00000379416|XDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1950866580009	4	328.19332	1308.74417	0.26945	8.8433E-05	2.3535	0.00077239	2.6229	0.00086082	328.1946618368283	31.792	0.69321	33.616	33.155	33.848	1.8246					54	25	5	0	0	0	1.039	1	13350	13350		0.45452	0	1	4626500	+		26760	10548	13239	13296	30758	30758					0.10215091671148002
QGLLKPLV	8	Unmodified	_QGLLKPLV_					0	0	0			REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	867.5676147341728	1	867.566215	866.558939	2.7949	0.0024247	-0.81857	-0.00071016	1.9763	0.0017146	867.5652201989785	107.79	0.19653	107.84	107.73	107.93	0.052452					42	10	5	0	0	0	0.89176	1	46230	46230		0.79363	0	1	374810000	+		26761	14519	13240	13297	30759	30759					0.12032153662164546
QGLLKPLV	8	Unmodified	_QGLLKPLV_					0	0	0			REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	867.5681030154228	1	867.566215	866.558939	3.0352	0.0026332	-1.4864	-0.0012896	1.5487	0.0013436	867.5647092540939	107.75	0.25156	107.91	107.79	108.04	0.15781					48	13	5	0	0	0	0.89176	2	46384	46384;46459		0.79363	0	1	5321100000	+		26762	14519	13240	13297	30760;30761	30760					0.12032153662164546
QGLLKPLV	8	Unmodified	_QGLLKPLV_					0	0	0			REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	REV__nc|ENSG00000196408|Q8NFA2-2|NOXO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	867.5673705935478	1	867.566215	866.558939	3.1265	0.0027125	-2.0246	-0.0017565	1.1019	0.000956	867.5642758833161	107.73	0.25763	107.89	107.75	108.01	0.15795					50	13	5	0	0	0	0.89176	1	46381	46381		0.79363	0	1	5463500000	+		26763	14519	13240	13297	30762	30762					0.12032153662164546
QGLLRSRPIR	10	Unmodified	_QGLLRSRPIR_					0	0	0			REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2501708865166	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.653	1	23.653	23.153	24.153	0								0	0	0	0.6623	1	9862	9862		0.56317	0.057215	1		+		26764	13378	13241	13298	30763	30763					0.14134698402403956
QGLLRSRPIR	10	Unmodified	_QGLLRSRPIR_					0	0	0			REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	REV__ENST00000483155.5_1_9:79007484-79008822:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2500793337822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.684	1	31.975	31.475	32.475	0.29086								0	0	0	0.66222	1	13299	13299		0.69767	0	1		+		26765	13378	13241	13298	30764	30764					0.14134698402403956
QGLQTFKTIF	10	Unmodified	_QGLQTFKTIF_					0	0	0		ENST00000441645.1_1_2:237317178-237317583:-|nuORF	ENST00000441645.1_1_2:237317178-237317583:-|nuORF	ENST00000441645.1_1_2:237317178-237317583:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8322631716728	2	591.829506	1181.64446	1.4467	0.00085622	0.5155	0.00030509	1.9622	0.0011613	591.8299893922748	48.522	1.2048	49.91	49.618	50.823	1.388					112	38	5	0	0	0	0.19223	1	20225	20225		49.933	6.0747	1	183570000			26766	6556	13242	13299	30765	30765					0.06090274057191891
QGLTGGPRLQA	11	Unmodified	_QGLTGGPRLQA_					0	0	0			REV__ENST00000533076.5_2_11:47429076-47433900:+|nuORF	REV__ENST00000533076.5_2_11:47429076-47433900:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.8123657107353	2	549.306729	1096.59891	1.644	0.00090306	-4.3113	-0.0023682	-2.6673	-0.0014652	549.3031475182378	67.604	0.55859	69.474	69.268	69.827	1.87					35	17	3	0	0	0	0.50855	1	28487	28487		23.79	5.4167	1	7803600	+		26767	13668	13243	13300	30766	30766					0.054470485948286296
QGNEESRSL	9	Unmodified	_QGNEESRSL_					0	0	0		ENSG00000135324|ENST00000257776|MRAP2	ENSG00000135324|ENST00000257776|MRAP2	ENSG00000135324|ENST00000257776|MRAP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	340.4954101443291	3	340.496594	1018.46795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.268	1	72.61	72.11	73.11	1.3415								0	0	0	0.42693	1	29910	29910		2.9952	0.49676	1				26768	2658	13244	13301	30767	30767					-0.04054386843904467
QGQMEVTWYK	10	Unmodified	_QGQMEVTWYK_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	635.3013183474541	2	635.300255	1268.58596	2.0371	0.0012941	-1.9309	-0.0012267	0.10621	6.7474E-05	635.29921625986	41.591	0.64468	41.591	41.209	41.853	0					25	19	2	0	0	0	0.88022	1	17313	17313		3.5965	0	1	377830			26769	3385	13245	13302	30768	30768					-0.03759150579617199
QGQYCKLF	8	Unmodified	_QGQYCKLF_					0	0	0		ENST00000586523.1_1_18:43665917-43666256:-|nuORF	ENST00000586523.1_1_18:43665917-43666256:-|nuORF	ENST00000586523.1_1_18:43665917-43666256:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7454406619072	2	493.741845	985.469137	3.5056	0.0017308	1.7165	0.00084751	5.2221	0.0025783	493.74338243999716	72.974	0.46867	74.304	74.101	74.569	1.3297					47	14	4	0	0	0	0.87106	1	30629	30629		14.582	2.0501	1	24005000			26770	7455	13246	13303	30769	30769					-0.024178440086984665
QGRGRKKGLVP	11	Unmodified	_QGRGRKKGLVP_					0	0	0			REV__ENST00000332830.8_2_17:27277920-27278154:-|nuORF	REV__ENST00000332830.8_2_17:27277920-27278154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.898	1	29.177	28.677	29.677	0.2793								0	0	0	0.63775	1	12093	12093		1.3296	0.1363	1		+		26771	12454	13247	13304	30770	30770					0.14134698402403956
QGRLQPHLLC	10	Unmodified	_QGRLQPHLLC_					0	0	0		ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENST00000414673.5_1_17:16734454-16736059:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8212768435478	2	582.81895	1163.62335	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.24	1	46.569	46.069	47.069	0.32899								0	0	0	0.65836	1	19405	19405		6.7232	0	1				26772	6398	13248	13305	30771	30771					0.04807985476668364
QGRQPVRN	8	Unmodified	_QGRQPVRN_					0	0	0			REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	478.1980773806572	2	477.765032	953.515511	2.9029	0.0013869	-0.12854	-6.1411E-05	2.7744	0.0013255	477.7651594447598	75.172	0.45885	76.478	76.247	76.706	1.3063					19	14	2	0	0	0	2.3239	1	31635	31635		0.69038	0	1	609840	+		26773	12109	13249	13306	30772	30772					0.03689356937604771
QGRQPVRN	8	Unmodified	_QGRQPVRN_					0	0	0			REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	477.765032	953.515511	2.1861	0.0010444	-1.6053	-0.00076694	0.58083	0.0002775	477.76455945985845	76.322	0.55109	76.322	76.105	76.656	0	-0.10522	-0.00029294	NaN	0.69038	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	821190	+		26774	12109	13249	13306							0.03689356937604771
QGRQPVRN	8	Unmodified	_QGRQPVRN_					0	0	0			REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	REV__ENST00000233575.6_1_2:27593531-27594140:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	477.765032	953.515511	3.0864	0.0014746	-1.81	-0.00086475	1.2764	0.00060983	477.7643109953879	76.159	0.39128	76.481	76.24	76.631	0.32163	0.054125	-0.00048856	NaN	0.69038	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1853300	+		26775	12109	13249	13306							0.03689356937604771
QGRRRGRVPK	10	Unmodified	_QGRRRGRVPK_					0	0	0		ENST00000576980.1_1_17:7255325-7255865:+|nuORF	ENST00000576980.1_1_17:7255325-7255865:+|nuORF	ENST00000576980.1_1_17:7255325-7255865:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.6937744021416	4	303.19044	1208.73265	-2.871	-0.00087046	-0.86473	-0.00026218	-3.7357	-0.0011326	303.1897586458605	26.938	0.42626	26.938	26.774	27.2	0					24	13	2	0	0	0	0.12556	1	11197	11197		1.9064	0.1641	1	3919200			26776	7415	13250	13307	30773	30773					0.13663752211004976
QGTIKNVILPL	11	Unmodified	_QGTIKNVILPL_					0	0	0			REV__chr20:49135931-49143854|113|13.45|0.47|4.83|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143854,49145139|STAU1,None|19	REV__chr20:49135931-49143854|113|13.45|0.47|4.83|-|0|TE_info:Looper,Looper_dup505,PiggyBac,DNA,donor,-,49143854,49145139|STAU1,None|19	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520629763603	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.359	1	96.665	96.165	97.165	0.3062								0	0	0	0.63775	1	40535	40535		1.0136	0.051299	1		+		26777	8309	13251	13308	30774	30774					0.14403109016711824
QGTTADLVL	9	Unmodified	_QGTTADLVL_					0	0	0			REV__tr|A0A7D7A6J7|A0A7D7A6J7_9CLOTSignalrecognitionparticlereceptorFtsYOS=ClostridiumintestinaleOX=36845GN=ftsYPE=3SV=1	REV__tr|A0A7D7A6J7|A0A7D7A6J7_9CLOTSignalrecognitionparticlereceptorFtsYOS=ClostridiumintestinaleOX=36845GN=ftsYPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1728393435478	2	459.250557	916.486562	1.3607	0.00062491	-0.19869	-9.1249E-05	1.162	0.00053366	459.25019516310124	70.696	0.089355	72.533	72.472	72.561	1.8378					4	2	2	0	0	0	0.11719	1	29657	29657		1.6526	0	1	179910	+		26778	15070	13252	13309	30775	30775					0.024977747979505693
QGVGCGAD	8	Unmodified	_QGVGCGAD_					0	0	0			REV__ENST00000397358.7_1_8:28748272-28748464:+|nuORF	REV__ENST00000397358.7_1_8:28748272-28748464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	706.2855102419853	1	706.282465	705.275189	1.1599	0.00081922	-0.81706	-0.00057707	0.34284	0.00024214	706.283914278632	31.663	1.8	31.954	31.002	32.802	0.29086					77	58	2	0	0	0	0.88587	2	13063	13063;13411		5.2307	0	1	548410	+		26779	12863	13253	13310	30776;30777	30776					-0.08923800444802055
QGVGCGAD	8	Unmodified	_QGVGCGAD_					0	0	0			REV__ENST00000397358.7_1_8:28748272-28748464:+|nuORF	REV__ENST00000397358.7_1_8:28748272-28748464:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	707.0189697146416	1	706.282465	705.275189	1.1599	0.00081922	-0.81706	-0.00057707	0.34284	0.00024214	706.283914278632	31.663	1.8	31.954	31.002	32.802	0.29086					77	58	2	0	0	0	2.3239	1	13599	13599		2.3027	0	1	548410	+		26780	12863	13253	13310	30778	30778					-0.08923800444802055
QGVHLVGL	8	Unmodified	_QGVHLVGL_					0	0	0			REV__ENSG00000211456|ENST00000389061|SACM1L	REV__ENSG00000211456|ENST00000389061|SACM1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	822.4851562380791	1	822.483214	821.475937	2.8303	0.0023279	0.56571	0.00046529	3.396	0.0027932	822.4843037273495	109.29	0.39902	109.45	109.23	109.63	0.15898					28	18	2	0	0	0	0.89178	1	47428	47428		0.69038	0	1	24655000	+		26781	11831	13254	13311	30779	30779					0.0580583693420067
QHICELFII	9	Unmodified	_QHICELFII_					0	0	0		ENSG00000164292|ENST00000379982|RHOBTB3	ENSG00000164292|ENST00000379982|RHOBTB3	ENSG00000164292|ENST00000379982|RHOBTB3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.8004638552666	2	558.299527	1114.5845	1.7347	0.00096848	-0.10132	-5.6567E-05	1.6334	0.00091191	558.2998300974197	56.975	0.18305	58.39	58.338	58.521	1.4145					7	5	2	0	0	0	0.094078	1	23908	23908		18.135	2.8865	1	4014000			26782	3768	13255	13312	30780	30780					0.031792601223060046
QHIGNIFMF	9	Unmodified	_QHIGNIFMF_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;CTNND1-TMX2|1|fusion;ENSG00000213593|ENST00000278422|TMX2;CTNND1-TMX2|3|fusion	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7771484255791	2	553.776219	1105.53789	2.55	0.0014121	-2.6379	-0.0014608	-0.087907	-4.8681E-05	553.7750315694552	65.529	0.4624	66.927	66.632	67.094	1.3989					41	14	4	0	0	0	0.03795	2	27467	27467;27519		77.984	36.167	1	4971900			26783	16028	13256	13313	30781;30782	30781					-0.010661797089824177
QHIGNIFMF	9	Unmodified	_QHIGNIFMF_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;CTNND1-TMX2|1|fusion;ENSG00000213593|ENST00000278422|TMX2;CTNND1-TMX2|3|fusion	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7770263552666	2	553.776219	1105.53789	1.7534	0.00097099	-1.054	-0.0005837	0.69937	0.0003873	553.7761366291678	65.016	0.40606	66.925	66.72	67.126	1.9085					40	12	4	0	0	0	0.03795	2	27263	27263;27319		77.984	49.497	1	3578300			26784	16028	13256	13313	30783;30784	30783					-0.010661797089824177
QHIILQSKL	9	Unmodified	_QHIILQSKL_					0	0	0			REV__nc|ENSG00000090612|Q14587-2|ZNF268	REV__nc|ENSG00000090612|Q14587-2|ZNF268	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3309203982353	2	540.332216	1078.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.117	1	34.942	34.442	35.442	1.8246								0	0	0	0.082379	1	13883	13883		37.974	1.847	1		+		26785	8892	13257	13314	30785	30785					0.11369997639667417
QHIKKKKKVKG	11	Unmodified	_QHIKKKKKVKG_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2979308962822	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2532	1	2.8874	2.3874	3.3874	0.63417								0	0	0	0.63775	1	926	926		0	0	1		+		26786	9113	13258	13315	30786	30786					0.22417277055797058
QHIKKKKKVKG	11	Unmodified	_QHIKKKKKVKG_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	441.2964660525322	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.688	1	5.3093	4.8093	5.8093	0.62127								0	0	0	0.63775	1	1934	1934		0	0	1		+		26787	9113	13258	13315	30787	30787					0.22417277055797058
QHIKKKKKVKG	11	Unmodified	_QHIKKKKKVKG_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2979003787041	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7741	1	2.5225	2.0225	3.0225	0.7484								0	0	0	0.63775	1	734	734		0	0	1		+		26788	9113	13258	13315	30788	30788					0.22417277055797058
QHIKKKKKVKG	11	Unmodified	_QHIKKKKKVKG_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2972900271416	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0592	1	3.8076	3.3076	4.3076	0.7484								0	0	0	0.63775	1	1269	1269		0	0	1		+		26789	9113	13258	13315	30789	30789					0.22417277055797058
QHIKKKKKVKG	11	Unmodified	_QHIKKKKKVKG_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2971984744072	3	441.297868	1320.87177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9888	1	4.734	4.234	5.234	0.74525								0	0	0	0.63775	1	1653	1653		0	0	1		+		26790	9113	13258	13315	30790	30790					0.22417277055797058
QHKRKKKKEKK	11	Unmodified	_QHKRKKKKEKK_					0	0	0			REV__ENSG00000119720|ENST00000354366|NRDE2	REV__ENSG00000119720|ENST00000354366|NRDE2	MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3216125369072	3	489.319443	1464.9365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.69	1	103.75	103.25	104.25	0.059502								0	0	0	0.63775	1	43556	43556		0	0	1		+		26791	9554	13259	13316	30791	30791					0.222628518618194
QHLKKKEQKL	10	Unmodified	_QHLKKKEQKL_					0	0	0			REV__nc|ENSG00000173040|Q86UK5-2|EVC2	REV__nc|ENSG00000173040|Q86UK5-2|EVC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	640.3936035037041	2	640.395879	1278.7772	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.733	1	41.595	41.095	42.095	1.8624								0	0	0	0.66176	1	16659	16659		1.4819	0	1		+		26792	11081	13260	13317	30792	30792					0.14896718513841734
QHLKKYKHL	9	Unmodified	_QHLKKYKHL_					0	0	0			REV__ENSG00000128908|ENST00000648947|INO80	REV__ENSG00000128908|ENST00000648947|INO80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8578369021416	2	597.858932	1193.70331	1.4016	0.00083797	-3.2046	-0.0019159	-1.8029	-0.0010779	597.8570776506242	77.203	0.63533	78.954	78.655	79.29	1.7514					39	19	3	0	0	0	0.83213	1	32387	32387		2.0598	0	1	1929300	+		26793	9741	13261	13318	30793	30793					0.11420795142180395
QHRRPVVL	8	Unmodified	_QHRRPVVL_					0	0	0		ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8118469119072	2	502.809242	1003.60393	1.6635	0.00083641	2.7264	0.0013708	4.3898	0.0022073	502.81070319756935	71.609	0.25449	71.609	71.446	71.7	0					14	7	2	0	0	0	0.87276	1	29799	29799		13.508	2.3934	1	569150			26794	7213	13262	13319	30794	30794					0.10227397248081616
QHRRPVVL	8	Unmodified	_QHRRPVVL_					0	0	0		ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	502.809242	1003.60393	1.9619	0.00098649	2.7299	0.0013726	4.6919	0.0023591	502.81094340865536	70.951	0.25594	71.275	71.143	71.399	0.32359	0.023574	-0.00010508	NaN	13.508	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	644700			26795	7213	13262	13319							0.10227397248081616
QHRRPVVL	8	Unmodified	_QHRRPVVL_					0	0	0		ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	502.809242	1003.60393	2.6273	0.001321	3.6156	0.0018179	6.2428	0.0031389	502.8120020280917	69.703	0.28568	71.061	70.962	71.247	1.3579	-0.18986	0.00078555	NaN	13.508	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574190			26796	7213	13262	13319							0.10227397248081616
QHRRPVVL	8	Unmodified	_QHRRPVVL_					0	0	0		ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	ENST00000540159.3_1_10:133783899-133784124:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	502.809242	1003.60393	1.3626	0.00068515	3.0231	0.0015201	4.3858	0.0022052	502.8122080751264	69.207	0.21628	71.06	70.92	71.136	1.853	-0.19132	0.00018978	NaN	13.508	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	569760			26797	7213	13262	13319							0.10227397248081616
QIALRCGI	8	Unmodified	_QIALRCGI_					0	0	0		ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	ENSG00000102547|ENST00000409308|CAB39L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	436.7754394412041	2	437.25238	872.490207	1.2856	0.00056212	2.5732	0.0011251	3.8588	0.0016873	437.2538482242291	73.326	0.28154	73.326	73.09	73.372	0					21	8	3	0	0	0	2.3239	1	30518	30518		4.756	0	1	5325300			26798	1394	13263	13320	30795	30795					0.04886166090830102
QICGDCHR	8	Unmodified	_QICGDCHR_					0	0	0		ENST00000439704.1_1_7:63369621-63370485:-|nuORF	ENST00000439704.1_1_7:63369621-63370485:-|nuORF	ENST00000439704.1_1_7:63369621-63370485:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1336852908134	3	311.133945	930.380005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.03	1	101.24	100.74	101.74	0.20527								0	0	0	1.0178	1	42479	42479		0.45834	0	1				26799	6549	13264	13321	30796	30796					-0.08797002239873564
QIDALQCWI	9	Unmodified	_QIDALQCWI_					0	0	0			REV__TDRD1|p.R827W|1|0.4|ENSG00000095627|chr10:114218569-114218569|C/T|missense_variant	REV__TDRD1|p.R827W|1|0.4|ENSG00000095627|chr10:114218569-114218569|C/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.8169433474541	2	545.273509	1088.53247	2.7619	0.001506	0.98209	0.00053551	3.744	0.0020415	545.2741198606085	62.395	0.18993	63.813	63.683	63.873	1.4177					10	5	2	0	0	0	0.097511	1	26171	26171		16.942	0	1	422260	+		26800	14676	13265	13322	30797	30797					-0.008259032914565978
QIDNPDYK	8	Unmodified	_QIDNPDYK_					0	0	0		ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7385436892509	2	496.737814	991.461075	-0.1498	-7.4413E-05	0.34717	0.00017245	0.19737	9.8042E-05	496.7386330877062	12.919	0.12619	13.646	13.569	13.695	0.72639					5	3	2	0	0	0	0.87213	1	5377	5377		13.906	5.1606	1	356480			26801	4508	13266	13323	30798	30798					-0.03499699724477523
QIDNPDYK	8	Unmodified	_QIDNPDYK_					0	0	0		ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	ENSG00000179218|ENST00000316448|CALR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7387573122978	2	496.737814	991.461075	0.059078	2.9346E-05	0.61439	0.00030519	0.67347	0.00033454	496.7385901757991	12.686	0.15192	13.473	13.395	13.547	0.78751					7	4	2	0	0	0	0.82246	1	5273	5273		19.257	9.1831	1	516240			26802	4508	13266	13323	30799	30799					-0.03499699724477523
QIDVIALLI	9	Unmodified	_QIDVIALLI_					0	0	0			REV__nc|ENSG00000117281|O95971-2|CD160	REV__nc|ENSG00000117281|O95971-2|CD160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	997.6327392458916	1	997.629209	996.621933	5.0799	0.0050679	0.75827	0.00075647	5.8382	0.0058244	997.6310714859103	88.671	0.25748	90.118	89.953	90.21	1.4467					9	7	2	0	0	0	0.086433	1	37364	37364		53.833	5.4869	1	1409800	+		26803	9496	13267	13324	30800	30800					0.12348674659574499
QIDVIALLI	9	Unmodified	_QIDVIALLI_					0	0	0			REV__nc|ENSG00000117281|O95971-2|CD160	REV__nc|ENSG00000117281|O95971-2|CD160	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	997.629209	996.621933	2.8207	0.0028141	-0.070656	-7.0488E-05	2.7501	0.0027436	997.6298267224043	89.954	0.25729	90.163	89.985	90.242	0.20904	0.022558	-0.00031713	NaN	53.833	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	586540	+		26804	9496	13267	13324							0.12348674659574499
QIDVIALLI	9	Unmodified	_QIDVIALLI_					0	0	0			REV__nc|ENSG00000117281|O95971-2|CD160	REV__nc|ENSG00000117281|O95971-2|CD160	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	997.629209	996.621933	5.0799	0.0050679	0.75827	0.00075647	5.8382	0.0058244	997.6310714859103	88.671	0.25748	90.118	89.953	90.21	1.4467	-0.022558	0.00050983	NaN	53.833	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1409800	+		26805	9496	13267	13324							0.12348674659574499
QIEDIFDNSRN	11	Unmodified	_QIEDIFDNSRN_					0	0	0		nc|ENSG00000158486|Q8TD57-3|DNAH3;DNAH3|p.L2088Pfs*41|1|0.69|ENSG00000158486|chr16:21000370-21000382|GGAAGGTGGAGAA/-|frameshift_variant;DNAH3|p.T2544Ifs*7|1|0.16|ENSG00000158486|chr16:20985111-20985112|-/A|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;DNAH3|p.L917Ffs*10|1|0.04|ENSG00000158486|chr16:21086975-21086975|C/-|frameshift_variant	nc|ENSG00000158486|Q8TD57-3|DNAH3	nc|ENSG00000158486|Q8TD57-3|DNAH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	675.8190185427666	2	675.817855	1349.62116	1.8285	0.0012357	-0.9532	-0.00064419	0.87528	0.00059153	675.8176488930249	63.332	0.34691	63.662	63.505	63.852	0.32974					29	10	4	0	0	0	0.62604	1	26507	26507		20.415	4.2654	1	1413200			26806	415	13268	13325	30801	30801					-0.03966816518095584
QIEDIFDNSRN	11	Unmodified	_QIEDIFDNSRN_					0	0	0		nc|ENSG00000158486|Q8TD57-3|DNAH3;DNAH3|p.L2088Pfs*41|1|0.69|ENSG00000158486|chr16:21000370-21000382|GGAAGGTGGAGAA/-|frameshift_variant;DNAH3|p.T2544Ifs*7|1|0.16|ENSG00000158486|chr16:20985111-20985112|-/A|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;DNAH3|p.L917Ffs*10|1|0.04|ENSG00000158486|chr16:21086975-21086975|C/-|frameshift_variant	nc|ENSG00000158486|Q8TD57-3|DNAH3	nc|ENSG00000158486|Q8TD57-3|DNAH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	675.8200561404228	2	675.817855	1349.62116	2.6171	0.0017687	-0.50936	-0.00034423	2.1077	0.0014244	675.8178040896382	62.297	0.28584	63.715	63.556	63.842	1.4177					21	8	3	0	0	0	0.26505	1	26102	26102		34.932	3.6637	1	1513800			26807	415	13268	13325	30802	30802					-0.03966816518095584
QIEDIFDNSRN	11	Unmodified	_QIEDIFDNSRN_					0	0	0		nc|ENSG00000158486|Q8TD57-3|DNAH3;DNAH3|p.L2088Pfs*41|1|0.69|ENSG00000158486|chr16:21000370-21000382|GGAAGGTGGAGAA/-|frameshift_variant;DNAH3|p.T2544Ifs*7|1|0.16|ENSG00000158486|chr16:20985111-20985112|-/A|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;nc|ENSG00000158486|Q8TD57-2|DNAH3;DNAH3|p.L917Ffs*10|1|0.04|ENSG00000158486|chr16:21086975-21086975|C/-|frameshift_variant	nc|ENSG00000158486|Q8TD57-3|DNAH3	nc|ENSG00000158486|Q8TD57-3|DNAH3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	675.817855	1349.62116	2.3229	0.0015698	-1.8092	-0.0012227	0.51366	0.00034714	675.816508165946	61.784	0.28254	63.741	63.625	63.908	1.9571	0.029659	-0.0010297	NaN	34.932	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1641500			26808	415	13268	13325							-0.03966816518095584
QIEPGKKPDI	10	Unmodified	_QIEPGKKPDI_					0	0	0			REV__ENSG00000177994|ENST00000398634|C2orf73	REV__ENSG00000177994|ENST00000398634|C2orf73	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8166381716728	2	562.819138	1123.62372	1.9871	0.0011184	-2.1116	-0.0011885	-0.12451	-7.0077E-05	562.8173249679562	71.51	0.50361	73.334	73.191	73.694	1.824					31	15	3	0	0	0	0.79268	1	30061	30061		13.042	0.51092	1	4263900	+		26809	11234	13269	13326	30803	30803					0.06685683677528687
QIERILALAP	10	Unmodified	_QIERILALAP_					0	0	0			REV__tr|A0A553SP89|A0A553SP89_NIACIUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenolN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=murGPE=3SV=1	REV__tr|A0A553SP89|A0A553SP89_NIACIUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenolN-acetylglucosaminetransferaseOS=NialliacirculansOX=1397GN=murGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3444091677666	2	562.345323	1122.67609	1.3848	0.00077873	-1.9933	-0.0011209	-0.6085	-0.00034219	562.3440565614203	74.125	1.2926	74.125	73.734	75.027	0					60	40	2	0	0	0	0.89646	1	30823	30823		1.8442	0.19162	1	1676500	+		26810	15076	13270	13327	30804	30804					0.11966266811123205
QIESLHAETH	10	Unmodified	_QIESLHAETH_					0	0	0			REV__nc|ENSG00000170959|M0R2J8|DCDC1	REV__nc|ENSG00000170959|M0R2J8|DCDC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.7855102419853	2	582.785827	1163.5571	2.7497	0.0016025	-1.7054	-0.00099386	1.0443	0.00060862	582.7848281645004	61.905	0.40423	63.862	63.657	64.061	1.9571					37	12	4	0	0	0	0.63205	1	25942	25942		21.537	2.098	1	4757800	+		26811	11006	13271	13328	30805	30805					-0.018135518844019316
QIFVKRFHRWL	11	Unmodified	_QIFVKRFHRWL_					0	0	0			REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.6368896365166	3	510.63325	1528.87792	5.5162	0.0028168	1.343	0.00068578	6.8592	0.0035025	510.9682514626373	89.664	1.1381	90.684	89.914	91.053	1.0199					54	35	2	0	0	0	1.0402	2	37696	37696;37788		0.094841	0	1	1261200	+		26812	13912	13272	13329	30806;30807	30806					0.1346379528736179
QIFVKRFHRWL	11	Unmodified	_QIFVKRFHRWL_					0	0	0			REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	REV__ENST00000563230.1_1_16:79123974-79135149:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.6368286013603	3	510.63325	1528.87792	4.4771	0.0022862	1.1244	0.00057417	5.6016	0.0028603	510.63377874035876	91.638	1.4759	92.575	91.833	93.309	0.93623					76	46	2	0	0	0	1.0402	1	38359	38359		0.094841	0	1	2648900	+		26813	13912	13272	13329	30808	30808					0.1346379528736179
QIGSVLVPQGQ	11	Unmodified	_QIGSVLVPQGQ_					0	0	0			REV__nc|ENSG00000168453|O43593-2|HR	REV__nc|ENSG00000168453|O43593-2|HR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3198119997978	2	563.316763	1124.61897	2.1076	0.0011873	3.7858	0.0021326	5.8934	0.0033199	563.3183263051096	88.165	0.36629	88.165	87.999	88.365	0					18	11	2	0	0	0	0.96769	1	36828	36828		5.7319	0.97584	1	997960	+		26814	10910	13273	13330	30809	30809					0.06164799534781196
QIKFSPVAKKL	11	Unmodified	_QIKFSPVAKKL_					0	0	0		nc|ENSG00000180488|Q8NAN2-2|MIGA1;ENSG00000180488|ENST00000370791|MIGA1;nc|ENSG00000180488|Q8NAN2|MIGA1	nc|ENSG00000180488|Q8NAN2-2|MIGA1	nc|ENSG00000180488|Q8NAN2-2|MIGA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	629.8984863162041	2	629.897723	1257.78089	2.6544	0.001672	-3.2303	-0.0020348	-0.5759	-0.00036276	629.8966854883923	107.36	0.23018	107.41	107.29	107.52	0.052452					20	10	3	0	0	0	0.98155	1	45936	45936		4.897	1.9018	1	22976000			26815	4550	13274	13331	30810	30810					0.1623138828770152
QIKKEKNN	8	Unmodified	_QIKKEKNN_					0	0	0			REV__CIR1|p.K405Nfs*42|1|0.15|ENSG00000138433|chr2:174348635-174348635|T/-|frameshift_variant	REV__CIR1|p.K405Nfs*42|1|0.15|ENSG00000138433|chr2:174348635-174348635|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2885314822197	2	501.290548	1000.56654	1.6159	0.00081002	0.54537	0.00027339	2.1613	0.0010834	501.2905682671978	67.241	1.5614	67.241	66.577	68.139	0					98	49	3	0	0	0	0.89008	1	28006	28006		2.5775	0.27475	1	1969600	+		26816	8359	13275	13332	30811	30811					0.06628261191792717
QIKKLHLRA	9	Unmodified	_QIKKLHLRA_					0	0	0			REV__AluSx1_dup105873|chr19:18572335-18572629:-|2.269443612888212|0.0188810566591458|6.91|429.0|3|1|sense	REV__AluSx1_dup105873|chr19:18572335-18572629:-|2.269443612888212|0.0188810566591458|6.91|429.0|3|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	369.1222106814384	3	369.576742	1105.7084	1.5671	0.00057917	3.4287	0.0012672	4.9959	0.0018464	369.5780622232706	47.665	0.55793	47.995	47.785	48.343	0.33034					21	18	2	0	0	0	0.11955	1	19916	19916		0	0	1	382250	+		26817	8113	13276	13333	30812	30812					0.15977099004794582
QIKLITSIIRI	11	Unmodified	_QIKLITSIIRI_					0	0	0			REV__ENSG00000221910|ENST00000408955|OR2F2	REV__ENSG00000221910|ENST00000408955|OR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.4324218630791	2	649.43193	1296.84931	3.2809	0.0021307	-2.0271	-0.0013164	1.2539	0.00081429	649.430553688515	107.32	0.23013	107.48	107.37	107.6	0.15795					35	11	5	0	0	0	1.0214	1	46057	46057		2.4985	1.0166	1	550510000	+		26818	11880	13277	13334	30813	30813					0.2127563286755958
QIKYNFSFRYI	11	Unmodified	_QIKYNFSFRYI_					0	0	0		ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.5970641970634	3	493.597871	1477.77178	1.6441	0.00081154	-2.0659	-0.0010197	-0.42177	-0.00020818	493.59697674209457	53.213	0.50991	53.213	52.949	53.459	0					45	18	3	0	0	0	0.9945	1	22232	22232		4.1166	0	1	4612400			26819	1586	13278	13335	30814	30814					0.05200994931351488
QIKYNFSFRYI	11	Unmodified	_QIKYNFSFRYI_					0	0	0		ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	ENSG00000106804|ENST00000223642|C5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.9324828982353	3	493.597871	1477.77178	0.68833	0.00033976	-0.18784	-9.2717E-05	0.50049	0.00024704	493.9323415431837	51.291	0.51044	52.685	52.437	52.948	1.3938					60	16	6	0	0	0	0.98455	1	21479	21479		4.7159	0.59929	1	4106800			26820	1586	13278	13335	30815	30815					0.05200994931351488
QILADYGFV	9	Unmodified	_QILADYGFV_					0	0	0		ENST00000453016.5_1_2:160567242-160567344:-|nuORF	ENST00000453016.5_1_2:160567242-160567344:-|nuORF	ENST00000453016.5_1_2:160567242-160567344:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2693969607353	2	513.26875	1024.52295	2.0764	0.0010657	-0.085689	-4.3981E-05	1.9907	0.0010218	513.2686811264332	65.401	0.37971	65.728	65.517	65.896	0.32689					17	11	3	0	0	0	0.68551	1	27419	27419		7.9102	0	1	1373400			26821	6621	13279	13336	30816	30816					0.011666516946434058
QILAQTVFT	9	Unmodified	_QILAQTVFT_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2910644412041	2	510.78985	1019.56515	2.5847	0.0013202	-3.6769	-0.0018781	-1.0922	-0.00055789	511.28861185882687	49.744	0.71519	51.135	50.704	51.419	1.3911					52	22	3	0	0	0	0.61249	1	20919	20919		10.824	0	1	4880800	+		26822	9770	13280	13337	30817	30817					0.056146271030456774
QILERHKK	8	Unmodified	_QILERHKK_					0	0	0			REV__ENST00000483365.1_1_X:70596867-70597689:+|nuORF;REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2163574099541	3	351.217214	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.932	1	92.123	91.623	92.623	0.19042								0	0	0	1.0178	1	38499	38499		0.40072	0	1		+		26823	9612;13379	13281	13338	30818	30818					0.10652246699692114
QILFLLLYRRL	11	Unmodified	_QILFLLLYRRL_					0	0	0			REV__ENST00000507175.5_1_5:145838810-145843302:+|nuORF	REV__ENST00000507175.5_1_5:145838810-145843302:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2538329958916	4	362.734149	1446.90749	-0.48842	-0.00017717	-0.7555	-0.00027405	-1.2439	-0.00045121	362.73385842894913	82.112	0.94565	82.112	81.854	82.8	0					44	30	2	0	0	0	0.14606	1	34442	34442		0	0	1	497010	+		26824	13544	13282	13339	30819	30819					0.20191314512840108
QILFLLLYRRL	11	Unmodified	_QILFLLLYRRL_					0	0	0			REV__ENST00000507175.5_1_5:145838810-145843302:+|nuORF	REV__ENST00000507175.5_1_5:145838810-145843302:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2542602419853	4	362.734149	1446.90749	1.5334	0.00055621	2.4369	0.00088396	3.9703	0.0014402	362.9855780253557	44.453	0.59085	44.78	44.575	45.166	0.32674					27	19	2	0	0	0	0.14606	1	18714	18714		0	0	1	1501600	+		26825	13544	13282	13339	30820	30820					0.20191314512840108
QILLKKRYYE	10	Unmodified	_QILLKKRYYE_					0	0	0			REV__ENSG00000214414|ENST00000398290|TRIM77	REV__ENSG00000214414|ENST00000398290|TRIM77	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9345275759697	3	451.934484	1352.78162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.853	1	84.853	84.353	85.353	0								0	0	0	0.66176	1	35358	35358		0.62683	0.26015	1		+		26826	11853	13283	13340	30821	30821					0.11934182936761317
QILLPLLDL	9	Unmodified	_QILLPLLDL_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.8936340212822	3	346.558354	1036.65323	0.088918	3.0815E-05	2.9411	0.0010192	3.03	0.0010501	346.559397651492	23.433	0.37069	25.084	24.9	25.271	1.6511					20	11	2	0	0	0	0.8523	1	9777	9777		0.23584	0	1	542000	+		26827	8881	13284	13341	30822	30822					0.13637247693668542
QILNWLIVV	9	Unmodified	_QILNWLIVV_					0	0	0			REV__ENST00000418775.1_1_X:51139469-51141200:+|nuORF	REV__ENST00000418775.1_1_X:51139469-51141200:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.7999755740166	2	549.33951	1096.66447	2.3606	0.0012968	-2.1967	-0.0012067	0.16391	9.0044E-05	549.3387298671566	63.349	0.61658	64.762	64.439	65.055	1.4134					40	19	3	0	0	0	0.097511	1	26502	26502		7.2892	0	1	2566700	+		26828	12961	13285	13342	30823	30823					0.1200006978779129
QIRLLRILLII	11	Unmodified	_QIRLLRILLII_					0	0	0		ENST00000595463.5_1_19:50414393-50430957:-|nuORF;ENST00000599788.1_2_19:50414393-50432585:-|nuORF;ENST00000596437.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	455.3227722048759	3	455.321902	1362.94388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.35	1	91.541	91.041	92.041	0.19042								0	0	0	0.63775	1	38265	38265		0	0	1				26829	7513	13286	13343	30824	30824					0.27692191409551015
QIRLLRILLII	11	Unmodified	_QIRLLRILLII_					0	0	0		ENST00000595463.5_1_19:50414393-50430957:-|nuORF;ENST00000599788.1_2_19:50414393-50432585:-|nuORF;ENST00000596437.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	455.3218566775322	3	455.321902	1362.94388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.476	1	91.666	91.166	92.166	0.19042								0	0	0	0.63775	1	38315	38315		0	0	1				26830	7513	13286	13343	30825	30825					0.27692191409551015
QIRLLRILLII	11	Unmodified	_QIRLLRILLII_					0	0	0		ENST00000595463.5_1_19:50414393-50430957:-|nuORF;ENST00000599788.1_2_19:50414393-50432585:-|nuORF;ENST00000596437.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	ENST00000595463.5_1_19:50414393-50430957:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	455.3218566775322	3	455.321902	1362.94388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.668	1	91.858	91.358	92.358	0.19042								0	0	0	0.63775	1	38393	38393		0	0	1				26831	7513	13286	13343	30826	30826					0.27692191409551015
QIRLRRRKRRR	11	Unmodified	_QIRLRRRKRRR_					0	0	0		ENST00000260731.4_1_10:94353109-94353202:+|nuORF	ENST00000260731.4_1_10:94353109-94353202:+|nuORF	ENST00000260731.4_1_10:94353109-94353202:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	797.5272704958916	2	797.527282	1593.04001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.304	1	95.304	94.804	95.804	0								0	0	0	0.63775	1	39829	39829		0.35063	0	1				26832	5616	13287	13344	30827	30827					0.26721196812832204
QIRPLNPRLWR	11	Unmodified	_QIRPLNPRLWR_					0	0	0			REV__ENST00000480551.1_1_3:183005445-183005526:+|nuORF	REV__ENST00000480551.1_1_3:183005445-183005526:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	362.7017089724541	4	362.970385	1447.85244	-0.56593	-0.00020542	-2.4153	-0.0008767	-2.9813	-0.0010821	363.2204534198193	63.476	0.53583	63.476	63.208	63.744	0					22	16	2	0	0	0	0.14606	1	26356	26356		1.2148	0.76031	1	588630	+		26833	13350	13288	13345	30828	30828					0.14642320764914984
QIRYFTHH	8	Unmodified	_QIRYFTHH_					0	0	0		ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant;nc|ENSG00000133657|Q9H7F0|ATP13A3;ENSG00000133657|ENST00000645319|ATP13A3	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	367.2691223025322	3	367.857797	1100.55156	2.3998	0.0008828	0.058063	2.1359E-05	2.4579	0.00090416	368.1922356360988	82.672	0.3063	84.342	84.173	84.48	1.67					16	9	2	0	0	0	2.3239	1	34698	34698		0.45834	0	1	1318600			26834	88	13289	13346	30829	30829					0.005308141144723777
QISDTSVVL	9	Unmodified	_QISDTSVVL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENST00000548088.1_1_12:52632481-52635423:+|nuORF;ENST00000396270.3_1_12:69099864-69100302:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000430398.2_1_1:73570714-73571443:+|nuORF;CON__H-INV:HIT000016045;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	CON__P08729;nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	961.5254394412041	1	961.520053	960.512776	1.4269	0.001372	0.87607	0.00084236	2.303	0.0022144	961.521278423849	43.847	0.24395	45.201	45.01	45.254	1.3536					11	7	2	0	0	0	0.073578	1	18346	18346		58.679	12.658	1	958510		+	26835	343;345	13290	13347	30830	30830					0.030940439694290944
QISDTSVVL	9	Unmodified	_QISDTSVVL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENST00000548088.1_1_12:52632481-52635423:+|nuORF;ENST00000396270.3_1_12:69099864-69100302:+|nuORF;ENST00000414328.2_1_1:157043381-157043870:+|nuORF;ENST00000450021.1_1_2:183936291-183936849:-|nuORF;ENST00000430398.2_1_1:73570714-73571443:+|nuORF;CON__H-INV:HIT000016045;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	CON__P08729;nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	961.5229369997978	1	961.520053	960.512776	2.0246	0.0019467	1.6319	0.0015691	3.6565	0.0035158	961.5228298672329	43.184	0.24225	45.128	45.012	45.255	1.9438					12	7	2	0	0	0	0.044893	1	18109	18109		71.922	28.064	1	768780		+	26836	343;345	13290	13347	30831	30831					0.030940439694290944
QISSKKRP	8	Unmodified	_QISSKKRP_					0	0	0		ENSG00000142945|ENST00000372224|KIF2C;nc|ENSG00000142945|Q99661-2|KIF2C	ENSG00000142945|ENST00000372224|KIF2C	ENSG00000142945|ENST00000372224|KIF2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2892944216728	2	472.287808	942.561064	1.5772	0.0007449	-0.45862	-0.0002166	1.1186	0.0005283	472.28749819848395	77.575	0.89394	79.327	78.977	79.871	1.7514					71	28	4	0	0	0	0.89051	1	32466	32466		2.3027	2.3027	1	106420000			26837	3009	13291	13348	30832	30832					0.0874858239999412
QKGDEGARGF	10	Unmodified	_QKGDEGARGF_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7631713747978	2	532.759612	1063.50467	2.024	0.0010783	0.55361	0.00029494	2.5776	0.0013733	532.7621644379873	71.487	0.45721	72.828	72.541	72.998	1.3415					24	14	2	0	0	0	0.81324	1	30013	30013		10.824	0	1	3580800			26838	747	13292	13349	30833	30833					-0.02454090227342931
QKGDEGARGF	10	Unmodified	_QKGDEGARGF_					0	0	0		nc|ENSG00000060718|P12107-4|COL11A1;nc|ENSG00000060718|P12107-3|COL11A1;ENSG00000060718|ENST00000370096|COL11A1;nc|ENSG00000060718|P12107-2|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	nc|ENSG00000060718|P12107-4|COL11A1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	532.759612	1063.50467	1.3608	0.00072496	1.6731	0.00089134	3.0338	0.0016163	532.7603939213157	71.01	0.4845	72.834	72.518	73.003	1.824	0.0029821	0.0004545	NaN	10.824	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2456300			26839	747	13292	13349							-0.02454090227342931
QKGHTSMI	8	Unmodified	_QKGHTSMI_					0	0	0			REV__ENST00000466762.1_1_3:137982955-138014731:+|nuORF	REV__ENST00000466762.1_1_3:137982955-138014731:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2332946658134	2	451.231645	900.448736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.66	1	101.85	101.35	102.35	0.19076								0	0	0	1.0178	1	42741	42741		0.69038	0	1		+		26840	9399	13293	13350	30834	30834					-0.0054701466849564895
QKHENIYCF	9	Unmodified	_QKHENIYCF_					0	0	0			REV__tr|A0A553SHF0|A0A553SHF0_NIACITypeIIIpantothenatekinaseOS=NialliacirculansOX=1397GN=coaXPE=3SV=1	REV__tr|A0A553SHF0|A0A553SHF0_NIACITypeIIIpantothenatekinaseOS=NialliacirculansOX=1397GN=coaXPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5182372927666	3	394.518453	1180.53353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.692	1	31.692	31.192	32.192	0								0	0	0	0.42693	1	13279	13279		0.23584	0	1		+		26841	14790	13294	13351	30835	30835					-0.04951688922574249
QKIAEEITV	9	Unmodified	_QKIAEEITV_					0	0	0		nc|ENSG00000062598|Q96JJ3-3|ELMO2;ENSG00000062598|ENST00000290246|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.7946655154228	2	515.792589	1029.57063	2.7079	0.0013967	0.15389	7.9375E-05	2.8618	0.0014761	515.7933146423076	84.996	0.44777	84.996	84.749	85.196	0					20	13	2	0	0	0	0.68551	1	35398	35398		7.9102	0	1	593590			26842	757	13295	13352	30836	30836					0.05702305894828896
QKISEVTEKSE	11	Unmodified	_QKISEVTEKSE_					0	0	0		tr|A0A553SQJ2|A0A553SQJ2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07790PE=4SV=1	tr|A0A553SQJ2|A0A553SQJ2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07790PE=4SV=1	tr|A0A553SQJ2|A0A553SQJ2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07790PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	426.5596496462822	3	426.55763	1276.65106	2.9914	0.001276	3.2883	0.0014026	6.2796	0.0026786	426.55874887567995	92.405	0.33631	92.573	92.345	92.681	0.16835					20	10	2	0	0	0	1.0369	1	38656	38656		1.1098	0	1	1533900			26843	16519	13296	13353	30837	30837					0.0238012242723471
QKITWIIEK	9	Unmodified	_QKITWIIEK_					0	0	0			REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8479492068291	2	579.847699	1157.68084	2.493	0.0014456	-3.5938	-0.0020839	-1.1008	-0.00063832	579.8456136579196	88.242	0.4658	88.477	88.291	88.756	0.2347					41	14	4	0	0	0	0.79362	1	36977	36977		3.5965	0.60125	1	5435500	+		26844	15665	13297	13354	30838	30838					0.10831150953913493
QKKALFRKIRF	11	Unmodified	_QKKALFRKIRF_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4832946658134	4	359.481857	1433.89832	0.75941	0.00027299	2.2926	0.00082414	3.052	0.0010971	359.4825723376795	28.108	1.3426	28.379	28.179	29.521	0.27119					126	43	5	0	0	0	1.0402	1	12011	12011		0.08335	0	1	15384000	+		26845	11755	13298	13355	30839	30839					0.19872965947138255
QKKALFRKIRF	11	Unmodified	_QKKALFRKIRF_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4830505251884	4	359.481857	1433.89832	0.2639	9.4868E-05	2.4587	0.00088385	2.7226	0.00097872	359.4826316800377	25.983	1.3716	27.699	26.877	28.249	1.7167					138	44	5	0	0	0	1.0391	1	10874	10874		0.40827	0.2854	1	33189000	+		26846	11755	13298	13355	30840	30840					0.19872965947138255
QKKALFRKIRF	11	Unmodified	_QKKALFRKIRF_					0	0	0			REV__ENSG00000198918|ENST00000361575|RPL39	REV__ENSG00000198918|ENST00000361575|RPL39	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.7336303591728	4	359.481857	1433.89832	0.28112	0.00010106	0.2967	0.00010666	0.57782	0.00020772	359.4817495297129	26.46	0.88989	28.207	28.036	28.926	1.747					58	29	3	0	0	0	1.0391	1	11155	11155		0.40827	0.31342	1	24272000	+		26847	11755	13298	13355	30841	30841					0.19872965947138255
QKKAYQPDLVK	11	Unmodified	_QKKAYQPDLVK_					0	0	0		nc|ENSG00000128881|Q6IQ55-2|TTBK2;ENSG00000128881|ENST00000267890|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	nc|ENSG00000128881|Q6IQ55-2|TTBK2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	439.5127136111259	3	439.922355	1316.74524	0.71748	0.00031564	-1.192	-0.0005244	-0.47454	-0.00020876	439.9222949955441	26.513	0.15166	26.513	26.444	26.596	0					7	4	2	0	0	0	0.14606	1	11082	11082		9.7643	0	1	328300			26848	2387	13299	13356	30842	30842					0.09953306040006282
QKKGILTEIVH	11	Unmodified	_QKKGILTEIVH_					0	0	0			REV__nc|ENSG00000150753|P48643-2|CCT5	REV__nc|ENSG00000150753|P48643-2|CCT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1961242556572	4	317.194857	1264.75032	0.13675	4.3377E-05	2.818	0.00089386	2.9548	0.00093723	317.19563218135227	34.331	0.42652	36.153	35.864	36.291	1.8227					89	43	3	0	0	0	1.0191	1	14380	14380		2.6312	0.37851	1	38415000	+		26849	10386	13300	13357	30843	30843					0.1285360990261779
QKKISQKKPK	10	Unmodified	_QKKISQKKPK_					0	0	0		ENST00000249837.7_1_15:62315662-62325699:-|nuORF	ENST00000249837.7_1_15:62315662-62325699:-|nuORF	ENST00000249837.7_1_15:62315662-62325699:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.1991454958916	4	303.950124	1211.77139	-2.6527	-0.0008063	4.1134	0.0012503	1.4607	0.00044397	303.9515387699954	31.912	0.28381	31.912	31.789	32.072	0					13	8	2	0	0	0	0.12557	1	13356	13356		1.5923	0.13716	1	229970			26850	5581	13301	13358	30844	30844					0.17397620002157055
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.33993	1	0.33993	-0.16007	0.83993	0								0	0	0	0.42693	1	139	139		1.0715	0	1				26851	54;862;10329	13302	13359	30845	30845					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.45095	1	0.45095	-0.049052	0.95095	0								0	0	0	0.42693	1	184	184		0.23584	0	1				26852	54;862;10329	13302	13359	30846	30846					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.64266	1	0.64266	0.14266	1.1427	0								0	0	0	0.42693	1	263	263		1.0715	0	1				26853	54;862;10329	13302	13359	30847	30847					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.8477	1	0.8477	0.3477	1.3477	0								0	0	0	0.42693	1	347	347		0.23584	0	1				26854	54;862;10329	13302	13359	30848	30848					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.9573	1	0.9573	0.4573	1.4573	0								0	0	0	0.42693	1	392	392		1.0715	0	1				26855	54;862;10329	13302	13359	30849	30849					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4703	1	1.4703	0.97029	1.9703	0								0	0	0	0.42693	1	604	604		1.0715	0	1				26856	54;862;10329	13302	13359	30850	30850					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5689	1	1.5689	1.0689	2.0689	0								0	0	0	0.42693	1	645	645		0.23584	0	1				26857	54;862;10329	13302	13359	30851	30851					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6723	1	1.6723	1.1723	2.1723	0								0	0	0	0.42693	1	687	687		1.0715	0	1				26858	54;862;10329	13302	13359	30852	30852					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7703	1	1.7703	1.2703	2.2703	0								0	0	0	0.42693	1	726	726		1.0715	0	1				26859	54;862;10329	13302	13359	30853	30853					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8618	1	1.8618	1.3618	2.3618	0								0	0	0	0.42693	1	763	763		1.0715	0	1				26860	54;862;10329	13302	13359	30854	30854					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9639	1	1.9639	1.4639	2.4639	0								0	0	0	0.42693	1	805	805		1.0715	0	1				26861	54;862;10329	13302	13359	30855	30855					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1738	1	2.1738	1.6738	2.6738	0								0	0	0	0.42693	1	892	892		1.0715	0	1				26862	54;862;10329	13302	13359	30856	30856					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3728	1	2.3728	1.8728	2.8728	0								0	0	0	0.42693	1	973	973		0.23584	0	1				26863	54;862;10329	13302	13359	30857	30857					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4679	1	2.4679	1.9679	2.9679	0								0	0	0	0.42693	1	1012	1012		1.0715	0	1				26864	54;862;10329	13302	13359	30858	30858					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8815	1	2.8815	2.3815	3.3815	0								0	0	0	0.42693	1	1181	1181		0.23584	0	1				26865	54;862;10329	13302	13359	30859	30859					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0777	1	3.0777	2.5777	3.5777	0								0	0	0	0.42693	1	1263	1263		1.0715	0	1				26866	54;862;10329	13302	13359	30860	30860					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4956	1	3.4956	2.9956	3.9956	0								0	0	0	0.42693	1	1435	1435		0.23584	0	1				26867	54;862;10329	13302	13359	30861	30861					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.592	1	3.592	3.092	4.092	0								0	0	0	0.42693	1	1475	1475		1.0715	0	1				26868	54;862;10329	13302	13359	30862	30862					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7039	1	3.7039	3.2039	4.2039	0								0	0	0	0.42693	1	1521	1521		1.0715	0	1				26869	54;862;10329	13302	13359	30863	30863					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0084	1	4.0084	3.5084	4.5084	0								0	0	0	0.42693	1	1647	1647		1.0715	0	1				26870	54;862;10329	13302	13359	30864	30864					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1115	1	4.1115	3.6115	4.6115	0								0	0	0	0.42693	1	1690	1690		1.0715	0	1				26871	54;862;10329	13302	13359	30865	30865					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4141	1	4.4141	3.9141	4.9141	0								0	0	0	0.42693	1	1814	1814		1.0715	0	1				26872	54;862;10329	13302	13359	30866	30866					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5182	1	4.5182	4.0182	5.0182	0								0	0	0	0.42693	1	1856	1856		0.23584	0	1				26873	54;862;10329	13302	13359	30867	30867					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8186	1	4.8186	4.3186	5.3186	0								0	0	0	0.42693	1	1980	1980		1.0715	0	1				26874	54;862;10329	13302	13359	30868	30868					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9162	1	4.9162	4.4162	5.4162	0								0	0	0	0.42693	1	2020	2020		1.0715	0	1				26875	54;862;10329	13302	13359	30869	30869					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0132	1	5.0132	4.5132	5.5132	0								0	0	0	0.42693	1	2059	2059		1.0715	0	1				26876	54;862;10329	13302	13359	30870	30870					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.218	1	5.218	4.718	5.718	0								0	0	0	0.42693	1	2143	2143		1.0715	0	1				26877	54;862;10329	13302	13359	30871	30871					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3182	1	5.3182	4.8182	5.8182	0								0	0	0	0.42693	1	2185	2185		0.23584	0	1				26878	54;862;10329	13302	13359	30872	30872					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4234	1	5.4234	4.9234	5.9234	0								0	0	0	0.42693	1	2228	2228		1.0715	0	1				26879	54;862;10329	13302	13359	30873	30873					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5142	1	5.5142	5.0142	6.0142	0								0	0	0	0.42693	1	2264	2264		1.0715	0	1				26880	54;862;10329	13302	13359	30874	30874					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.61	1	5.61	5.11	6.11	0								0	0	0	0.42693	1	2304	2304		1.0715	0	1				26881	54;862;10329	13302	13359	30875	30875					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8154	1	5.8154	5.3154	6.3154	0								0	0	0	0.42693	1	2390	2390		0.23584	0	1				26882	54;862;10329	13302	13359	30876	30876					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1138	1	6.1138	5.6138	6.6138	0								0	0	0	0.42693	1	2511	2511		1.0715	0	1				26883	54;862;10329	13302	13359	30877	30877					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2088	1	6.2088	5.7088	6.7088	0								0	0	0	0.42693	1	2550	2550		1.0715	0	1				26884	54;862;10329	13302	13359	30878	30878					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3253	1	6.3253	5.8253	6.8253	0								0	0	0	0.42693	1	2597	2597		1.0715	0	1				26885	54;862;10329	13302	13359	30879	30879					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6375	1	6.6375	6.1375	7.1375	0								0	0	0	0.42693	1	2727	2727		0.23584	0	1				26886	54;862;10329	13302	13359	30880	30880					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.835	1	6.835	6.335	7.335	0								0	0	0	0.42693	1	2809	2809		0.23584	0	1				26887	54;862;10329	13302	13359	30881	30881					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0455	1	7.0455	6.5455	7.5455	0								0	0	0	0.42693	1	2896	2896		1.0715	0	1				26888	54;862;10329	13302	13359	30882	30882					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1517	1	7.1517	6.6517	7.6517	0								0	0	0	0.42693	1	2940	2940		0.23584	0	1				26889	54;862;10329	13302	13359	30883	30883					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2459	1	7.2459	6.7459	7.7459	0								0	0	0	0.42693	1	2980	2980		1.0715	0	1				26890	54;862;10329	13302	13359	30884	30884					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4586	1	7.4586	6.9586	7.9586	0								0	0	0	0.42693	1	3066	3066		1.0715	0	1				26891	54;862;10329	13302	13359	30885	30885					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5598	1	7.5598	7.0598	8.0598	0								0	0	0	0.42693	1	3108	3108		1.0715	0	1				26892	54;862;10329	13302	13359	30886	30886					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6573	1	7.6573	7.1573	8.1573	0								0	0	0	0.42693	1	3148	3148		1.0715	0	1				26893	54;862;10329	13302	13359	30887	30887					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8397	1	7.8397	7.3397	8.3397	0								0	0	0	0.42693	1	3223	3223		0.23584	0	1				26894	54;862;10329	13302	13359	30888	30888					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9442	1	7.9442	7.4442	8.4442	0								0	0	0	0.42693	1	3266	3266		0.23584	0	1				26895	54;862;10329	13302	13359	30889	30889					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2403	1	8.2403	7.7403	8.7403	0								0	0	0	0.42693	1	3389	3389		0.23584	0	1				26896	54;862;10329	13302	13359	30890	30890					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3497	1	8.3497	7.8497	8.8497	0								0	0	0	0.42693	1	3434	3434		1.0715	0	1				26897	54;862;10329	13302	13359	30891	30891					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4568	1	8.4568	7.9568	8.9568	0								0	0	0	0.42693	1	3479	3479		1.0715	0	1				26898	54;862;10329	13302	13359	30892	30892					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5604	1	8.5604	8.0604	9.0604	0								0	0	0	0.42693	1	3522	3522		1.0715	0	1				26899	54;862;10329	13302	13359	30893	30893					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.662	1	8.662	8.162	9.162	0								0	0	0	0.42693	1	3564	3564		0.23584	0	1				26900	54;862;10329	13302	13359	30894	30894					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8504	1	8.8504	8.3504	9.3504	0								0	0	0	0.42693	1	3642	3642		0.23584	0	1				26901	54;862;10329	13302	13359	30895	30895					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.955	1	8.955	8.455	9.455	0								0	0	0	0.42693	1	3685	3685		1.0715	0	1				26902	54;862;10329	13302	13359	30896	30896					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838622927666	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0492	1	9.0492	8.5492	9.5492	0								0	0	0	0.42693	1	3724	3724		1.0715	0	1				26903	54;862;10329	13302	13359	30897	30897					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1727	1	9.1727	8.6727	9.6727	0								0	0	0	0.42693	1	3776	3776		1.0715	0	1				26904	54;862;10329	13302	13359	30898	30898					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2748	1	9.2748	8.7748	9.7748	0								0	0	0	0.42693	1	3818	3818		1.0715	0	1				26905	54;862;10329	13302	13359	30899	30899					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3794	1	9.3794	8.8794	9.8794	0								0	0	0	0.42693	1	3861	3861		1.0715	0	1				26906	54;862;10329	13302	13359	30900	30900					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4867	1	9.4867	8.9867	9.9867	0								0	0	0	0.42693	1	3906	3906		1.0715	0	1				26907	54;862;10329	13302	13359	30901	30901					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.294	1	13.294	12.794	13.794	0								0	0	0	0.42693	1	5508	5508		1.0715	0	1				26908	54;862;10329	13302	13359	30902	30902					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.584	1	15.584	15.084	16.084	0								0	0	0	0.42693	1	6470	6470		1.0715	0	1				26909	54;862;10329	13302	13359	30903	30903					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.833	1	17.833	17.333	18.333	0								0	0	0	0.42693	1	7406	7406		1.0715	0	1				26910	54;862;10329	13302	13359	30904	30904					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.128	1	18.128	17.628	18.628	0								0	0	0	0.42693	1	7529	7529		1.0715	0	1				26911	54;862;10329	13302	13359	30905	30905					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.291	1	19.291	18.791	19.791	0								0	0	0	0.42693	1	8016	8016		1.0715	0	1				26912	54;862;10329	13302	13359	30906	30906					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837707400322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.403	1	19.403	18.903	19.903	0								0	0	0	0.42693	1	8064	8064		1.0715	0	1				26913	54;862;10329	13302	13359	30907	30907					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.608	1	19.608	19.108	20.108	0								0	0	0	0.42693	1	8149	8149		1.0715	0	1				26914	54;862;10329	13302	13359	30908	30908					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.784	1	19.784	19.284	20.284	0								0	0	0	0.42693	1	8222	8222		1.0715	0	1				26915	54;862;10329	13302	13359	30909	30909					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.19	1	20.19	19.69	20.69	0								0	0	0	0.42693	1	8392	8392		1.0715	0	1				26916	54;862;10329	13302	13359	30910	30910					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.312	1	20.312	19.812	20.812	0								0	0	0	0.42693	1	8444	8444		1.0715	0	1				26917	54;862;10329	13302	13359	30911	30911					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.538	1	20.538	20.038	21.038	0								0	0	0	0.42693	1	8538	8538		1.0715	0	1				26918	54;862;10329	13302	13359	30912	30912					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.718	1	20.718	20.218	21.218	0								0	0	0	0.42693	1	8613	8613		1.0715	0	1				26919	54;862;10329	13302	13359	30913	30913					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.967	1	20.967	20.467	21.467	0								0	0	0	0.42693	1	8717	8717		1.0715	0	1				26920	54;862;10329	13302	13359	30914	30914					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.307	1	21.307	20.807	21.807	0								0	0	0	0.42693	1	8859	8859		1.0715	0	1				26921	54;862;10329	13302	13359	30915	30915					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.433	1	21.433	20.933	21.933	0								0	0	0	0.42693	1	8912	8912		1.0715	0	1				26922	54;862;10329	13302	13359	30916	30916					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.607	1	21.607	21.107	22.107	0								0	0	0	0.42693	1	8985	8985		2.7352	0	1				26923	54;862;10329	13302	13359	30917	30917					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.745	1	21.745	21.245	22.245	0								0	0	0	0.42693	1	9043	9043		1.0715	0	1				26924	54;862;10329	13302	13359	30918	30918					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.988	1	21.988	21.488	22.488	0								0	0	0	0.42693	1	9145	9145		1.0715	0	1				26925	54;862;10329	13302	13359	30919	30919					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.629	1	22.629	22.129	23.129	0								0	0	0	0.42693	1	9419	9419		0.23584	0	1				26926	54;862;10329	13302	13359	30920	30920					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.742	1	22.742	22.242	23.242	0								0	0	0	0.42693	1	9470	9470		0.23584	0	1				26927	54;862;10329	13302	13359	30921	30921					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.862	1	22.862	22.362	23.362	0								0	0	0	0.42693	1	9523	9523		1.0715	0	1				26928	54;862;10329	13302	13359	30922	30922					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.013	1	23.013	22.513	23.513	0								0	0	0	0.42693	1	9590	9590		0.23584	0	1				26929	54;862;10329	13302	13359	30923	30923					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.133	1	23.133	22.633	23.633	0								0	0	0	0.42693	1	9640	9640		1.0715	0	1				26930	54;862;10329	13302	13359	30924	30924					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.252	1	23.252	22.752	23.752	0								0	0	0	0.42693	1	9691	9691		1.0715	0	1				26931	54;862;10329	13302	13359	30925	30925					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.374	1	23.374	22.874	23.874	0								0	0	0	0.42693	1	9743	9743		1.0715	0	1				26932	54;862;10329	13302	13359	30926	30926					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.499	1	23.499	22.999	23.999	0								0	0	0	0.42693	1	9797	9797		0.23584	0	1				26933	54;862;10329	13302	13359	30927	30927					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846862673759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.621	1	23.621	23.121	24.121	0								0	0	0	0.42693	1	9849	9849		1.0715	0	1				26934	54;862;10329	13302	13359	30928	30928					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.739	1	23.739	23.239	24.239	0								0	0	0	0.42693	1	9899	9899		1.0715	0	1				26935	54;862;10329	13302	13359	30929	30929					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.958	1	23.958	23.458	24.458	0								0	0	0	0.42693	1	9991	9991		1.0715	0	1				26936	54;862;10329	13302	13359	30930	30930					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.078	1	24.078	23.578	24.578	0								0	0	0	0.42693	1	10042	10042		1.0715	0	1				26937	54;862;10329	13302	13359	30931	30931					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.173	1	24.173	23.673	24.673	0								0	0	0	0.42693	1	10082	10082		1.0715	0	1				26938	54;862;10329	13302	13359	30932	30932					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845947146416	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.295	1	24.295	23.795	24.795	0								0	0	0	0.42693	1	10133	10133		0.23584	0	1				26939	54;862;10329	13302	13359	30933	30933					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.631	1	35.631	35.131	36.131	0								0	0	0	0.42693	1	14936	14936		0.23584	0	1				26940	54;862;10329	13302	13359	30934	30934					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.743	1	35.743	35.243	36.243	0								0	0	0	0.42693	1	14984	14984		0.23584	0	1				26941	54;862;10329	13302	13359	30935	30935					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849914431572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.603	1	52.603	52.103	53.103	0								0	0	0	0.42693	1	21938	21938		0.23584	0	1				26942	54;862;10329	13302	13359	30936	30936					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851135134697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.843	1	52.843	52.343	53.343	0								0	0	0	0.42693	1	22037	22037		0.23584	0	1				26943	54;862;10329	13302	13359	30937	30937					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2848998904228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.939	1	52.939	52.439	53.439	0								0	0	0	0.42693	1	22076	22076		0.23584	0	1				26944	54;862;10329	13302	13359	30938	30938					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.037	1	53.037	52.537	53.537	0								0	0	0	0.42693	1	22117	22117		0.23584	0	1				26945	54;862;10329	13302	13359	30939	30939					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2832824587822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.149	1	53.149	52.649	53.649	0								0	0	0	0.42693	1	22164	22164		0.23584	0	1				26946	54;862;10329	13302	13359	30940	30940					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2838928103447	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.356	1	53.356	52.856	53.856	0								0	0	0	0.42693	1	22249	22249		0.23584	0	1				26947	54;862;10329	13302	13359	30941	30941					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.456	1	53.456	52.956	53.956	0								0	0	0	0.42693	1	22290	22290		0.23584	0	1				26948	54;862;10329	13302	13359	30942	30942					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847473025322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.865	1	53.865	53.365	54.365	0								0	0	0	0.42693	1	22456	22456		0.23584	0	1				26949	54;862;10329	13302	13359	30943	30943					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.081	1	54.081	53.581	54.581	0								0	0	0	0.42693	1	22544	22544		0.23584	0	1				26950	54;862;10329	13302	13359	30944	30944					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2847778201103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.518	1	54.518	54.018	55.018	0								0	0	0	0.42693	1	22720	22720		0.23584	0	1				26951	54;862;10329	13302	13359	30945	30945					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.025	1	55.025	54.525	55.525	0								0	0	0	0.42693	1	22924	22924		0.26902	0	1				26952	54;862;10329	13302	13359	30946	30946					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2837707400322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.143	1	55.143	54.643	55.643	0								0	0	0	0.42693	1	22973	22973		0.26902	0	1				26953	54;862;10329	13302	13359	30947	30947					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851745486259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.161	1	57.161	56.661	57.661	0								0	0	0	0.42693	1	23853	23853		0.26902	0	1				26954	54;862;10329	13302	13359	30948	30948					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.074	1	60.074	59.574	60.574	0								0	0	0	0.42693	1	25049	25049		0.26902	0	1				26955	54;862;10329	13302	13359	30949	30949					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2854492068291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.407	1	60.407	59.907	60.907	0								0	0	0	0.42693	1	25194	25194		0.26902	0	1				26956	54;862;10329	13302	13359	30950	30950					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2850524783134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.823	1	60.823	60.323	61.323	0								0	0	0	0.42693	1	25362	25362		0.26902	0	1				26957	54;862;10329	13302	13359	30951	30951					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2851440310478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.948	1	60.948	60.448	61.448	0								0	0	0	0.42693	1	25414	25414		0.26902	0	1				26958	54;862;10329	13302	13359	30952	30952					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2849304080009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.989	1	62.989	62.489	63.489	0								0	0	0	0.42693	1	26263	26263		0.26902	0	1				26959	54;862;10329	13302	13359	30953	30953					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.159	1	65.159	64.659	65.659	0								0	0	0	0.42693	1	27156	27156		0.23584	0	1				26960	54;862;10329	13302	13359	30954	30954					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.39	1	110.39	109.89	110.89	0								0	0	0	0.42693	1	47781	47781		0.23584	0	1				26961	54;862;10329	13302	13359	30955	30955					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_01	1	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.05	1	118.05	117.55	118.55	0								0	0	0	0.42693	1	50877	50877		0.23584	0	1				26962	54;862;10329	13302	13359	30956	30956					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.022251	1	0.18069	-0.31931	0.68069	0.15844								0	0	0	0.42693	1	9	9		0.23584	0	1				26963	54;862;10329	13302	13359	30957	30957					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.62931	1	0.78775	0.28775	1.2877	0.15844								0	0	0	0.42693	1	259	259		1.0715	0	1				26964	54;862;10329	13302	13359	30958	30958					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.72633	1	0.88477	0.38477	1.3848	0.15844								0	0	0	0.42693	1	299	299		1.0715	0	1				26965	54;862;10329	13302	13359	30959	30959					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1398	1	1.2868	0.78682	1.7868	0.14703								0	0	0	0.42693	1	470	470		0.23584	0	1				26966	54;862;10329	13302	13359	30960	30960					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3305	1	2.4531	1.9531	2.9531	0.12256								0	0	0	0.42693	1	961	961		0.23584	0	1				26967	54;862;10329	13302	13359	30961	30961					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5356	1	2.6582	2.1582	3.1582	0.12256								0	0	0	0.42693	1	1045	1045		0.23584	0	1				26968	54;862;10329	13302	13359	30962	30962					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2935	1	4.3955	3.8955	4.8955	0.10199								0	0	0	0.42693	1	1774	1774		0.23584	0	1				26969	54;862;10329	13302	13359	30963	30963					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6746	1	5.7545	5.2545	6.2545	0.079923								0	0	0	0.42693	1	2345	2345		1.0715	0	1				26970	54;862;10329	13302	13359	30964	30964					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0539	1	7.1302	6.6302	7.6302	0.07632								0	0	0	0.42693	1	2918	2918		1.0715	0	1				26971	54;862;10329	13302	13359	30965	30965					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4579	1	7.5342	7.0342	8.0342	0.07632								0	0	0	0.42693	1	3085	3085		0.23584	0	1				26972	54;862;10329	13302	13359	30966	30966					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2343	1	8.3106	7.8106	8.8106	0.07632								0	0	0	0.42693	1	3409	3409		1.0715	0	1				26973	54;862;10329	13302	13359	30967	30967					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6125	1	8.6888	8.1888	9.1888	0.07632								0	0	0	0.42693	1	3567	3567		1.0715	0	1				26974	54;862;10329	13302	13359	30968	30968					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8079	1	8.8842	8.3842	9.3842	0.07632								0	0	0	0.42693	1	3648	3648		0.23584	0	1				26975	54;862;10329	13302	13359	30969	30969					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3951	1	9.4731	8.9731	9.9731	0.077971								0	0	0	0.42693	1	3893	3893		1.0715	0	1				26976	54;862;10329	13302	13359	30970	30970					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5777	1	9.6557	9.1557	10.156	0.077971								0	0	0	0.42693	1	3969	3969		1.0715	0	1				26977	54;862;10329	13302	13359	30971	30971					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.018	1	10.096	9.5958	10.596	0.077971								0	0	0	0.42693	1	4153	4153		1.0715	0	1				26978	54;862;10329	13302	13359	30972	30972					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840453982353	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.166	1	10.244	9.744	10.744	0.077971								0	0	0	0.42693	1	4215	4215		1.0715	0	1				26979	54;862;10329	13302	13359	30973	30973					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.294	1	10.372	9.8715	10.872	0.077971								0	0	0	0.42693	1	4268	4268		1.0715	0	1				26980	54;862;10329	13302	13359	30974	30974					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.416	1	10.496	9.9957	10.996	0.079334								0	0	0	0.42693	1	4320	4320		1.0715	0	1				26981	54;862;10329	13302	13359	30975	30975					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839233279228	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.542	1	10.624	10.124	11.124	0.082325								0	0	0	0.42693	1	4373	4373		1.0715	0	1				26982	54;862;10329	13302	13359	30976	30976					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.661	1	10.743	10.243	11.243	0.082325								0	0	0	0.42693	1	4423	4423		1.0715	0	1				26983	54;862;10329	13302	13359	30977	30977					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.846	1	10.929	10.429	11.429	0.082325								0	0	0	0.42693	1	4500	4500		1.0715	0	1				26984	54;862;10329	13302	13359	30978	30978					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.243	1	12.332	11.832	12.832	0.089381								0	0	0	0.42693	1	5080	5080		1.0715	0	1				26985	54;862;10329	13302	13359	30979	30979					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.644	1	12.733	12.233	13.233	0.089381								0	0	0	0.42693	1	5249	5249		1.0715	0	1				26986	54;862;10329	13302	13359	30980	30980					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.824	1	12.923	12.423	13.423	0.09944								0	0	0	0.42693	1	5324	5324		1.0715	0	1				26987	54;862;10329	13302	13359	30981	30981					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.298	1	13.398	12.898	13.898	0.09944								0	0	0	0.42693	1	5519	5519		1.0715	0	1				26988	54;862;10329	13302	13359	30982	30982					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.519	1	13.618	13.118	14.118	0.09944								0	0	0	0.42693	1	5610	5610		1.0715	0	1				26989	54;862;10329	13302	13359	30983	30983					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.641	1	13.74	13.24	14.24	0.09944								0	0	0	0.42693	1	5660	5660		1.0715	0	1				26990	54;862;10329	13302	13359	30984	30984					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.735	1	13.834	13.334	14.334	0.09944								0	0	0	0.42693	1	5699	5699		1.0715	0	1				26991	54;862;10329	13302	13359	30985	30985					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838317751884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.859	1	13.958	13.458	14.458	0.09944								0	0	0	0.42693	1	5751	5751		1.0715	0	1				26992	54;862;10329	13302	13359	30986	30986					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.95	1	14.049	13.549	14.549	0.09944								0	0	0	0.42693	1	5788	5788		1.0715	0	1				26993	54;862;10329	13302	13359	30987	30987					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.204	1	14.317	13.817	14.817	0.11295								0	0	0	0.42693	1	5893	5893		1.0715	0	1				26994	54;862;10329	13302	13359	30988	30988					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.326	1	14.439	13.939	14.939	0.11295								0	0	0	0.42693	1	5944	5944		1.0715	0	1				26995	54;862;10329	13302	13359	30989	30989					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.418	1	14.531	14.031	15.031	0.11295								0	0	0	0.42693	1	5982	5982		1.0715	0	1				26996	54;862;10329	13302	13359	30990	30990					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841064333916	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.518	1	14.631	14.131	15.131	0.11295								0	0	0	0.42693	1	6024	6024		1.0715	0	1				26997	54;862;10329	13302	13359	30991	30991					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841979861259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.642	1	14.754	14.254	15.254	0.11295								0	0	0	0.42693	1	6076	6076		1.0715	0	1				26998	54;862;10329	13302	13359	30992	30992					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.76	1	14.873	14.373	15.373	0.11295								0	0	0	0.42693	1	6125	6125		1.0715	0	1				26999	54;862;10329	13302	13359	30993	30993					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.855	1	14.968	14.468	15.468	0.11295								0	0	0	0.42693	1	6165	6165		1.0715	0	1				27000	54;862;10329	13302	13359	30994	30994					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2838012576103	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.978	1	15.091	14.591	15.591	0.11295								0	0	0	0.42693	1	6216	6216		1.0715	0	1				27001	54;862;10329	13302	13359	30995	30995					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2835876345634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.173	1	15.286	14.786	15.786	0.11295								0	0	0	0.42693	1	6299	6299		1.0715	0	1				27002	54;862;10329	13302	13359	30996	30996					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.297	1	15.427	14.927	15.927	0.13022								0	0	0	0.42693	1	6349	6349		1.0715	0	1				27003	54;862;10329	13302	13359	30997	30997					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.418	1	15.548	15.048	16.048	0.13022								0	0	0	0.42693	1	6399	6399		1.0715	0	1				27004	54;862;10329	13302	13359	30998	30998					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.517	1	15.647	15.147	16.147	0.13022								0	0	0	0.42693	1	6439	6439		1.0715	0	1				27005	54;862;10329	13302	13359	30999	30999					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.639	1	15.77	15.27	16.27	0.13022								0	0	0	0.42693	1	6490	6490		1.0715	0	1				27006	54;862;10329	13302	13359	31000	31000					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.765	1	15.895	15.395	16.395	0.13022								0	0	0	0.42693	1	6542	6542		1.0715	0	1				27007	54;862;10329	13302	13359	31001	31001					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.916	1	16.046	15.546	16.546	0.13022								0	0	0	0.42693	1	6606	6606		1.0715	0	1				27008	54;862;10329	13302	13359	31002	31002					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844726443291	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.013	1	16.143	15.643	16.643	0.13022								0	0	0	0.42693	1	6647	6647		1.0715	0	1				27009	54;862;10329	13302	13359	31003	31003					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841674685478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.133	1	16.263	15.763	16.763	0.13022								0	0	0	0.42693	1	6697	6697		1.0715	0	1				27010	54;862;10329	13302	13359	31004	31004					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.223	1	16.353	15.853	16.853	0.13022								0	0	0	0.42693	1	6734	6734		1.0715	0	1				27011	54;862;10329	13302	13359	31005	31005					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.338	1	16.468	15.968	16.968	0.13022								0	0	0	0.42693	1	6781	6781		1.0715	0	1				27012	54;862;10329	13302	13359	31006	31006					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2836791872978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.457	1	16.608	16.108	17.108	0.15093								0	0	0	0.42693	1	6830	6830		1.0715	0	1				27013	54;862;10329	13302	13359	31007	31007					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2833740115166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.565	1	16.716	16.216	17.216	0.15093								0	0	0	0.42693	1	6874	6874		1.0715	0	1				27014	54;862;10329	13302	13359	31008	31008					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2832824587822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.704	1	16.855	16.355	17.355	0.15093								0	0	0	0.42693	1	6932	6932		0.23584	0	1				27015	54;862;10329	13302	13359	31009	31009					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2835876345634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.808	1	16.959	16.459	17.459	0.15093								0	0	0	0.42693	1	6975	6975		1.0715	0	1				27016	54;862;10329	13302	13359	31010	31010					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2837097048759	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.931	1	17.082	16.582	17.582	0.15093								0	0	0	0.42693	1	7024	7024		1.0715	0	1				27017	54;862;10329	13302	13359	31011	31011					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2837707400322	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.021	1	17.172	16.672	17.672	0.15093								0	0	0	0.42693	1	7060	7060		1.0715	0	1				27018	54;862;10329	13302	13359	31012	31012					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.118	1	17.269	16.769	17.769	0.15093								0	0	0	0.42693	1	7099	7099		1.0715	0	1				27019	54;862;10329	13302	13359	31013	31013					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.229	1	17.38	16.88	17.88	0.15093								0	0	0	0.42693	1	7146	7146		0.23584	0	1				27020	54;862;10329	13302	13359	31014	31014					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2839538455009	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.323	1	17.474	16.974	17.974	0.15093								0	0	0	0.42693	1	7186	7186		1.0715	0	1				27021	54;862;10329	13302	13359	31015	31015					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.438	1	17.589	17.089	18.089	0.15093								0	0	0	0.42693	1	7234	7234		1.0715	0	1				27022	54;862;10329	13302	13359	31016	31016					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.555	1	17.706	17.206	18.206	0.15093								0	0	0	0.42693	1	7284	7284		1.0715	0	1				27023	54;862;10329	13302	13359	31017	31017					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.675	1	17.848	17.348	18.348	0.17285								0	0	0	0.42693	1	7335	7335		1.0715	0	1				27024	54;862;10329	13302	13359	31018	31018					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.772	1	17.944	17.444	18.444	0.17285								0	0	0	0.42693	1	7376	7376		0.23584	0	1				27025	54;862;10329	13302	13359	31019	31019					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.891	1	18.064	17.564	18.564	0.17285								0	0	0	0.42693	1	7426	7426		1.0715	0	1				27026	54;862;10329	13302	13359	31020	31020					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.99	1	18.163	17.663	18.663	0.17285								0	0	0	0.42693	1	7467	7467		1.0715	0	1				27027	54;862;10329	13302	13359	31021	31021					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.355	1	18.528	18.028	19.028	0.17285								0	0	0	0.42693	1	7619	7619		1.0715	0	1				27028	54;862;10329	13302	13359	31022	31022					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845031619072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.455	1	18.628	18.128	19.128	0.17285								0	0	0	0.42693	1	7661	7661		1.0715	0	1				27029	54;862;10329	13302	13359	31023	31023					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843200564384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.57	1	18.743	18.243	19.243	0.17285								0	0	0	0.42693	1	7709	7709		1.0715	0	1				27030	54;862;10329	13302	13359	31024	31024					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.689	1	18.862	18.362	19.362	0.17285								0	0	0	0.42693	1	7758	7758		1.0715	0	1				27031	54;862;10329	13302	13359	31025	31025					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2842590212822	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.781	1	18.954	18.454	19.454	0.17285								0	0	0	0.42693	1	7797	7797		1.0715	0	1				27032	54;862;10329	13302	13359	31026	31026					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.95	1	19.143	18.643	19.643	0.19342								0	0	0	0.42693	1	7868	7868		1.0715	0	1				27033	54;862;10329	13302	13359	31027	31027					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.101	1	19.295	18.795	19.795	0.19342								0	0	0	0.42693	1	7932	7932		0.23584	0	1				27034	54;862;10329	13302	13359	31028	31028					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2840759158134	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.249	1	19.443	18.943	19.943	0.19342								0	0	0	0.42693	1	7994	7994		1.0715	0	1				27035	54;862;10329	13302	13359	31029	31029					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.362	1	19.555	19.055	20.055	0.19342								0	0	0	0.42693	1	8042	8042		1.0715	0	1				27036	54;862;10329	13302	13359	31030	31030					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844421267509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.576	1	19.769	19.269	20.269	0.19342								0	0	0	0.42693	1	8133	8133		0.23584	0	1				27037	54;862;10329	13302	13359	31031	31031					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2844116091728	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.735	1	19.928	19.428	20.428	0.19342								0	0	0	0.42693	1	8200	8200		1.0715	0	1				27038	54;862;10329	13302	13359	31032	31032					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.85	1	20.044	19.544	20.544	0.19342								0	0	0	0.42693	1	8248	8248		1.0715	0	1				27039	54;862;10329	13302	13359	31033	31033					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.376	1	35.676	35.176	36.176	0.29942								0	0	0	0.42693	1	14863	14863		0.23584	0	1				27040	54;862;10329	13302	13359	31034	31034					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.904	1	74.229	73.729	74.729	0.32494								0	0	0	0.42693	1	30916	30916		0.26902	0	1				27041	54;862;10329	13302	13359	31035	31035					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2852050662041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.43	102.93	103.93	0.059502								0	0	0	0.42693	1	43341	43341		0.23584	0	1				27042	54;862;10329	13302	13359	31036	31036					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2840148806572	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.83	1	38.106	37.606	38.606	1.2762								0	0	0	0.42693	1	15457	15457		0.23584	0	1				27043	54;862;10329	13302	13359	31037	31037					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_01	3	391.2910339236259	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.2	1	110.36	109.86	110.86	0.16133								0	0	0	0.42693	1	47878	47878		0	0	1				27044	54;862;10329	13302	13359	31038	31038					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2831909060478	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.666	1	16.705	16.205	17.205	1.0392								0	0	0	0.42693	1	6500	6500		0.23584	0	1				27045	54;862;10329	13302	13359	31039	31039					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2835265994072	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.768	1	16.807	16.307	17.307	1.0392								0	0	0	0.42693	1	6543	6543		1.0715	0	1				27046	54;862;10329	13302	13359	31040	31040					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2836486697197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.869	1	16.909	16.409	17.409	1.0392								0	0	0	0.42693	1	6586	6586		0.23584	0	1				27047	54;862;10329	13302	13359	31041	31041					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2839843630791	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.074	1	17.113	16.613	17.613	1.0392								0	0	0	0.42693	1	6671	6671		0.23584	0	1				27048	54;862;10329	13302	13359	31042	31042					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2843810915947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.563	1	17.865	17.365	18.365	1.3023								0	0	0	0.42693	1	6878	6878		0.23584	0	1				27049	54;862;10329	13302	13359	31043	31043					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2842285037041	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.662	1	17.964	17.464	18.464	1.3023								0	0	0	0.42693	1	6920	6920		0.23584	0	1				27050	54;862;10329	13302	13359	31044	31044					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845641970634	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.516	1	68.405	67.905	68.905	1.8889								0	0	0	0.42693	1	27902	27902		0.26902	0	1				27051	54;862;10329	13302	13359	31045	31045					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846252322197	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.557	1	86.153	85.653	86.653	1.5962								0	0	0	0.42693	1	35465	35465		0	0	1				27052	54;862;10329	13302	13359	31046	31046					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2852966189384	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.68	1	86.276	85.776	86.776	1.5962								0	0	0	0.42693	1	35517	35517		0	0	1				27053	54;862;10329	13302	13359	31047	31047					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2867614626884	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.91	1	103.09	102.59	103.59	0.18066								0	0	0	0.42693	1	43307	43307		0	0	1				27054	54;862;10329	13302	13359	31048	31048					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2863952517509	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.04	1	103.22	102.72	103.72	0.18066								0	0	0	0.42693	1	43360	43360		0	0	1				27055	54;862;10329	13302	13359	31049	31049					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2845336794853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.14	1	103.32	102.82	103.82	0.18066								0	0	0	0.42693	1	43407	43407		0	0	1				27056	54;862;10329	13302	13359	31050	31050					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2846557497978	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.64	1	103.81	103.31	104.31	0.1731								0	0	0	0.42693	1	43686	43686		0	0	1				27057	54;862;10329	13302	13359	31051	31051					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2834045290947	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.37	110.87	111.87	0.15038								0	0	0	0.42693	1	48205	48205		0	0	1				27058	54;862;10329	13302	13359	31052	31052					0.25026506998392506
QKKKKKKKK	9	Unmodified	_QKKKKKKKK_					0	0	0		AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;chr1:153690382-153690798|94|25.99|0.11|7.93|+|0|TE_info:AluSq,AluSq_dup1043,Alu,SINE,acceptor,+,153690798,153690971|NPR1,None|4;L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|85|2|sense;nc|ENSG00000070814|Q13428-2|TCOF1;MED4-PHF20L1|1|fusion;ENSG00000129292|ENST00000395386|PHF20L1;ENST00000607315.1_1_8:30013391-30013664:-|nuORF;L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense;AluY_dup40999|chr7:39812382-39812732:+|1.0973929866060954|0.0089243448215225|6.94|429.0|1|1|sense;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|9|2|sense;AluSz_dup26871|chr5:14396444-14396769:-|1.0029512423417093|0.0144398167027111|6.12|429.0|10|3|sense;AluSg7_dup4258|chr9:123378799-123379104:-|1.2244670816662402|0.1622388719295057|2.92|427.0|8|2|sense;AluYb8_dup2486|chr16:81085875-81086192:+|1.75652552794155|0.0110908870120779|7.31|429.0|12|3|sense;L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|9|1|sense;AluJr_dup5714|chr1:206071573-206071885:+|3.8060702337523407|0.0443725334079211|6.42|424.0|9|2|sense;chr1:52064938-52073577|122|24.27|0.79|4.95|+|1|TE_info:AluJr,AluJr_dup2411,Alu,SINE,acceptor,+,52073577,52073717|BTF3L4,None|6;nc|ENSG00000070814|Q13428-8|TCOF1;nc|ENSG00000070814|Q13428-6|TCOF1;nc|ENSG00000070814|Q13428-7|TCOF1;nc|ENSG00000070814|Q13428|TCOF1;ENSG00000070814|ENST00000643257|TCOF1;nc|ENSG00000070814|Q13428-4|TCOF1	AluSz6_dup44967|chr19:50999298-50999613:+|1.2648451641263083|0.1242237466592205|3.35|425.0|4|1|sense;nc|ENSG00000070814|Q13428-6|TCOF1;REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	391.2835571169853	3	391.283559	1170.82885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.31	1	111.46	110.96	111.96	0.15038								0	0	0	0.42693	1	48243	48243		0	0	1				27059	54;862;10329	13302	13359	31053	31053					0.25026506998392506
QKKKRKHRLW	10	Unmodified	_QKKKRKHRLW_					0	0	0		nc|ENSG00000108799|Q92800-5|EZH1;ENST00000585550.5_1_17:40855746-40872302:-|nuORF;ENST00000591330.5_1_17:40855746-40879722:-|nuORF;ENST00000585912.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-4|EZH1;ENST00000586103.5_1_17:40855746-40880959:-|nuORF;nc|ENSG00000108799|Q92800-3|EZH1;ENSG00000108799|ENST00000428826|EZH1;nc|ENSG00000108799|Q92800-2|EZH1	nc|ENSG00000108799|Q92800-5|EZH1	nc|ENSG00000108799|Q92800-5|EZH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	352.5467407107353	4	352.725653	1406.87351	0.12549	4.4263E-05	2.6556	0.00093671	2.7811	0.00098098	352.72596651828826	24.198	0.15339	25.439	25.331	25.485	1.241					6	4	2	0	0	0	0.1256	1	10096	10096		0.69767	0.19171	1	477430			27060	7850	13303	13360	31054	31054					0.18634330864438198
QKKLVDNNL	9	Unmodified	_QKKLVDNNL_					0	0	0			REV__ENST00000461865.1_1_X:38008966-38013244:-|nuORF	REV__ENST00000461865.1_1_X:38008966-38013244:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	536.3138915896416	2	536.31148	1070.60841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.609	1	65.936	65.436	66.436	0.32689								0	0	0	0.15983	1	27471	27471		29.082	2.1979	1		+		27061	13202	13304	13361	31055	31055					0.07592816880310238
QKKPVRTPEVK	11	Unmodified	_QKKPVRTPEVK_					0	0	0		ENST00000503900.1_1_5:75207117-75207609:+|nuORF	ENST00000503900.1_1_5:75207117-75207609:+|nuORF	ENST00000503900.1_1_5:75207117-75207609:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2026244997978	4	328.204219	1308.78777	-2.0442	-0.00067092	-1.3499	-0.00044303	-3.3941	-0.0011139	328.20352267034457	39.607	1.16	39.607	39.171	40.331	0					130	36	5	0	0	0	1.0224	1	16710	16710		2.4348	0.18206	1	23377000			27062	6992	13305	13362	31056	31056					0.1457270116827658
QKKRHKDKK	9	Unmodified	_QKKRHKDKK_					0	0	0			REV__ENST00000570230.1_1_16:90244151-90244304:+|nuORF	REV__ENST00000570230.1_1_16:90244151-90244304:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2498962283134	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.033	1	17.184	16.684	17.684	0.15093								0	0	0	0.42693	1	7065	7065		0.26902	0	1		+		27063	13963	13306	13363	31057	31057					0.14134698402403956
QKKRHKDKK	9	Unmodified	_QKKRHKDKK_					0	0	0			REV__ENST00000570230.1_1_16:90244151-90244304:+|nuORF	REV__ENST00000570230.1_1_16:90244151-90244304:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2522765994072	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.907	1	89.354	88.854	89.854	1.4467								0	0	0	0.42693	1	37055	37055		1.0715	0.10919	1		+		27064	13963	13306	13363	31058	31058					0.14134698402403956
QKKRKRRVYK	10	Unmodified	_QKKRKRRVYK_					0	0	0		ENSG00000159714|ENST00000565726|ZDHHC1;ENST00000348579.6_1_16:67428515-67429028:-|nuORF	ENSG00000159714|ENST00000565726|ZDHHC1	ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	464.1453430056572	3	463.968633	1388.88407	2.4316	0.0011282	1.0279	0.00047693	3.4595	0.0016051	464.3033033452269	41.848	0.42694	42.168	41.917	42.343	0.32058					17	13	2	0	0	0	0.12561	1	17539	17539		0.15932	0.064481	1	592340			27065	3539	13307	13364	31059	31059					0.20518313518891773
QKKRRSVRKYL	11	Unmodified	_QKKRRSVRKYL_					0	0	0		tr|A0A553SK14|A0A553SK14_NIACIPhenylalanine--tRNAligasebetasubunitOS=NialliacirculansOX=1397GN=pheTPE=3SV=1	tr|A0A553SK14|A0A553SK14_NIACIPhenylalanine--tRNAligasebetasubunitOS=NialliacirculansOX=1397GN=pheTPE=3SV=1	tr|A0A553SK14|A0A553SK14_NIACIPhenylalanine--tRNAligasebetasubunitOS=NialliacirculansOX=1397GN=pheTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.9762756228447	3	487.975676	1460.9052	1.3513	0.00065938	2.8875	0.001409	4.2388	0.0020684	487.976911042921	97.674	0.21568	97.674	97.569	97.784	0					19	6	5	0	0	0	1.0391	1	40828	40828		0.40827	0	1	52008000			27066	16268	13308	13365	31060	31060					0.19318278827745416
QKKWVTHLV	9	Unmodified	_QKKWVTHLV_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	ENSG00000067900|ENST00000399799|ROCK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2291747927666	3	380.229231	1137.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.016	1	80.016	79.516	80.516	0								0	0	0	0.42693	1	33319	33319		0.96228	0.18574	1				27067	827	13309	13366	31061	31061					0.10253703876537656
QKLLFRFLKTP	11	Unmodified	_QKLLFRFLKTP_					0	0	0		nc|ENSG00000010030|Q9Y603-8|ETV7;nc|ENSG00000010030|Q9Y603-3|ETV7;nc|ENSG00000010030|Q9Y603-7|ETV7;nc|ENSG00000010030|Q9Y603-2|ETV7;nc|ENSG00000010030|Q9Y603-4|ETV7;ENSG00000010030|ENST00000340181|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	695.9354125857353	2	695.932097	1389.84964	2.7639	0.0019235	2.0773	0.0014457	4.8412	0.0033692	695.9340101139243	107.27	0.17038	107.43	107.32	107.49	0.15781					24	8	4	0	0	0	1.0174	1	46091	46091		2.7352	1.2533	1	36306000			27068	544	13310	13367	31062	31062					0.17031052587412887
QKLLFRFLKTP	11	Unmodified	_QKLLFRFLKTP_					0	0	0		nc|ENSG00000010030|Q9Y603-8|ETV7;nc|ENSG00000010030|Q9Y603-3|ETV7;nc|ENSG00000010030|Q9Y603-7|ETV7;nc|ENSG00000010030|Q9Y603-2|ETV7;nc|ENSG00000010030|Q9Y603-4|ETV7;ENSG00000010030|ENST00000340181|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	695.9355956912041	2	695.932097	1389.84964	2.5294	0.0017603	2.5895	0.0018021	5.1188	0.0035624	695.9334307379503	107.26	0.17227	107.42	107.31	107.49	0.15795					22	8	4	0	0	0	1.0174	1	46027	46027		2.7352	0.23671	1	29219000			27069	544	13310	13367	31063	31063					0.17031052587412887
QKLLFRFLKTP	11	Unmodified	_QKLLFRFLKTP_					0	0	0		nc|ENSG00000010030|Q9Y603-8|ETV7;nc|ENSG00000010030|Q9Y603-3|ETV7;nc|ENSG00000010030|Q9Y603-7|ETV7;nc|ENSG00000010030|Q9Y603-2|ETV7;nc|ENSG00000010030|Q9Y603-4|ETV7;ENSG00000010030|ENST00000340181|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	695.932097	1389.84964	1.4336	0.00099771	4.753	0.0033078	6.1867	0.0043055	695.9348750300144	107.29	0.10469	107.29	107.24	107.35	0	-0.07948	0.0026153	NaN	2.7352	11	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6716500			27070	544	13310	13367							0.17031052587412887
QKLLFRFLKTP	11	Unmodified	_QKLLFRFLKTP_					0	0	0		nc|ENSG00000010030|Q9Y603-8|ETV7;nc|ENSG00000010030|Q9Y603-3|ETV7;nc|ENSG00000010030|Q9Y603-7|ETV7;nc|ENSG00000010030|Q9Y603-2|ETV7;nc|ENSG00000010030|Q9Y603-4|ETV7;ENSG00000010030|ENST00000340181|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	nc|ENSG00000010030|Q9Y603-8|ETV7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	695.932097	1389.84964	2.6934	0.0018744	3.6861	0.0025653	6.3795	0.0044397	695.9337924574703	107.3	0.12498	107.35	107.25	107.37	0.052444	-0.019578	0.0011303	NaN	2.7352	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2898700			27071	544	13310	13367							0.17031052587412887
QKLQKIEKRAE	11	Unmodified	_QKLQKIEKRAE_					0	0	0			REV__nc|ENSG00000101298|O15079|SNPH	REV__nc|ENSG00000101298|O15079|SNPH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9107543826103	2	685.90935	1369.80415	2.7523	0.0018878	-1.2023	-0.0008247	1.5499	0.0010631	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.0214	1	36020	36020		2.4985	0	1	4137900	+		27072	9028	13311	13368	31064	31064					0.1340378233435331
QKLRRKAT	8	Unmodified	_QKLRRKAT_					0	0	0			REV__nc|ENSG00000083535|Q8WXW3-2|PIBF1	REV__nc|ENSG00000083535|Q8WXW3-2|PIBF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1000.642565906048	1	1000.63742	999.630147	3.8356	0.0038381	1.5883	0.0015893	5.424	0.0054274	1000.6387925501574	109	0.20057	109.16	109.05	109.25	0.15898					23	9	3	0	0	0	0.89178	1	47221	47221		0.69038	0	1	47265000	+		27073	8831	13312	13369	31065	31065					0.13031666419556132
QKLSKHKTPA	10	Unmodified	_QKLSKHKTPA_					0	0	0		ENSG00000171819|ENST00000376819|ANGPTL7	ENSG00000171819|ENST00000376819|ANGPTL7	ENSG00000171819|ENST00000376819|ANGPTL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2303344607353	3	379.89614	1136.66659	-0.36067	-0.00013702	1.3594	0.00051644	0.99875	0.00037942	379.8982534133087	72.81	1.3005	72.81	72.557	73.857	0					63	41	2	0	0	0	0.88508	1	30436	30436		3.0723	1.48	1	2188700			27074	4212	13313	13370	31066	31066					0.10372498525612173
QKLTALAP	8	Unmodified	_QKLTALAP_					0	0	0		ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.2599365115166	2	421.260728	840.506903	0.82429	0.00034724	-2.3064	-0.00097161	-1.4822	-0.00062437	421.2597240719134	65.913	0.44716	65.913	65.676	66.123	0					37	13	4	0	0	0	0.89008	1	27505	27505		2.5775	0	1	12368000			27075	5801	13314	13371	31067	31067					0.08026990248413313
QKLTALAP	8	Unmodified	_QKLTALAP_					0	0	0		ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	ENST00000310653.10_2_11:73388880-73388949:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2590515017509	2	421.260728	840.506903	2.3722	0.00099931	-3.0079	-0.0012671	-0.63568	-0.00026779	421.2592775050453	64.32	0.56847	66.248	65.95	66.518	1.928					36	17	3	0	0	0	0.88504	2	26927	26927;27032		5.7604	0	1	8316500			27076	5801	13314	13371	31068;31069	31068					0.08026990248413313
QKLVGTIA	8	Unmodified	_QKLVGTIA_					0	0	0			REV__ETNK1-MYO9B|1|fusion	REV__ETNK1-MYO9B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2622558474541	2	415.260728	828.506903	2.8049	0.0011648	1.3443	0.00055824	4.1493	0.001723	415.2609139413543	86.046	0.54586	86.298	86.068	86.614	0.25227					40	17	3	0	0	0	0.89051	1	36006	36006		2.3027	0	1	2618600	+		27077	8948	13315	13372	31070	31070					0.08578990248429363
QKMYLVCMF	9	Unmodified	_QKMYLVCMF_					0	0	0			REV__ENST00000370435.4_1_6:72014589-72014727:+|nuORF	REV__ENST00000370435.4_1_6:72014589-72014727:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1522399783134	3	388.18677	1161.53848	1.6739	0.00064978	-3.8038	-0.0014766	-2.1299	-0.00082679	388.1850894320533	39.86	0.58707	41.722	41.584	42.171	1.8624					31	18	2	0	0	0	0.11901	1	16853	16853		0.23584	0.23584	1	1029700	+		27078	12660	13316	13373	31071	31071					-0.035828443757964124
QKMYLVCMF	9	Unmodified	_QKMYLVCMF_					0	0	0			REV__ENST00000370435.4_1_6:72014589-72014727:+|nuORF	REV__ENST00000370435.4_1_6:72014589-72014727:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	388.18677	1161.53848	1.6674	0.00064726	-3.6216	-0.0014059	-1.9542	-0.00075861	388.1850174205935	40.202	0.21844	41.512	41.389	41.608	1.3102	-0.10516	0.00010283	NaN	0	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517010	+		27079	12660	13316	13373							-0.035828443757964124
QKPLIITAR	9	Unmodified	_QKPLIITAR_					0	0	0			REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2266113162041	3	347.225598	1038.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.667	1	57.99	57.49	58.49	0.32298								0	0	0	0.42693	1	24179	24179		0.86438	0.23755	1		+		27080	15454	13317	13374	31072	31072					0.13718301502262875
QKPLIITAR	9	Unmodified	_QKPLIITAR_					0	0	0			REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	REV__tr|A0A7D6VSL6|A0A7D6VSL6_9CLOTM56familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2266113162041	3	347.225598	1038.65496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.035	1	47.41	46.91	47.91	1.3751								0	0	0	0.42693	1	19282	19282		1.0715	0.3738	1		+		27081	15454	13317	13374	31073	31073					0.13718301502262875
QKQVEVIVD	9	Unmodified	_QKQVEVIVD_					0	0	0		ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2993041872978	2	529.298039	1056.58152	2.8882	0.0015287	-0.052073	-2.7562E-05	2.8361	0.0015011	529.2980912439592	101.04	0.187	101.11	101	101.19	0.067009					13	5	4	0	0	0	0.7849	1	42306	42306		3.9444	1.3669	1	8778300			27082	3006	13318	13375	31074	31074					0.055497082691545074
QKQVEVIVD	9	Unmodified	_QKQVEVIVD_					0	0	0		ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	ENSG00000142798|ENST00000374695|HSPG2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	529.298039	1056.58152	1.3045	0.00069045	-1.8544	-0.00098154	-0.54995	-0.00029109	529.2972320672123	101.05	0.2379	101.05	100.97	101.2	0	-0.030779	-0.0012577	NaN	3.9444	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5862300			27083	3006	13318	13375							0.055497082691545074
QKRIHLRAE	9	Unmodified	_QKRIHLRAE_					0	0	0		ENST00000411645.1_1_1:205595116-205595278:+|nuORF	ENST00000411645.1_1_1:205595116-205595278:+|nuORF	ENST00000411645.1_1_1:205595116-205595278:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8446533083916	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.83753	1	31536	31536		1.8442	0	1	9020800			27084	6383	13319	13376	31075	31075					0.10422436476960684
QKRKKRFYRVV	11	Unmodified	_QKRKKRFYRVV_					0	0	0			REV__tr|A0A553SLQ9|A0A553SLQ9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21130PE=4SV=1	REV__tr|A0A553SLQ9|A0A553SLQ9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_21130PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	303.1985961794853	5	302.392463	1506.92593	0.68327	0.00020661	0.78177	0.0002364	1.465	0.00044302	302.39245384988453	34.68	0.34941	34.98	34.733	35.083	0.29942					13	13	2	0	0	0	0.14606	1	14541	14541		0.094841	0.011491	1	688060	+		27085	14995	13320	13377	31076	31076					0.19274869207379197
QKRMRRDWD	9	Unmodified	_QKRMRRDWD_					0	0	0		nc|ENSG00000087087|Q9BXP5-5|SRRT;nc|ENSG00000087087|Q9BXP5-4|SRRT;nc|ENSG00000087087|Q9BXP5-2|SRRT;nc|ENSG00000087087|Q9BXP5-3|SRRT;ENSG00000087087|ENST00000611405|SRRT	nc|ENSG00000087087|Q9BXP5-5|SRRT	nc|ENSG00000087087|Q9BXP5-5|SRRT	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2705	1	1.9238	1.4238	2.4238	0.65331								0	0	0	0.42693	1	520	520		0.23584	0	1				27086	1083	13321	13378	31077	31077					0.007887007315275696
QKRRACFL	8	Unmodified	_QKRRACFL_					0	0	0			REV__nc|ENSG00000278224|Q2TBC4-2|PRICKLE4	REV__nc|ENSG00000278224|Q2TBC4-2|PRICKLE4	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1970092654228	3	341.195644	1020.5651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.978	1	64.307	63.807	64.807	0.32899								0	0	0	1.0178	1	26806	26806		1.4819	1.0236	1		+		27087	9650	13322	13379	31078	31078					0.0556434862204469
QKRRKLLLILK	11	Unmodified	_QKRRKLLLILK_					0	0	0		ENST00000467796.5_1_22:51221718-51237143:+|nuORF;ENST00000480246.1_1_22:51222460-51237143:+|nuORF	ENST00000467796.5_1_22:51221718-51237143:+|nuORF	ENST00000467796.5_1_22:51221718-51237143:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	470.3354980349541	3	470.332801	1407.97657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.079	1	95.079	94.579	95.579	0								0	0	0	0.63775	1	39735	39735		0	0	1				27088	6713	13323	13380	31079	31079					0.2889039853241684
QKRRRHRATRK	11	Unmodified	_QKRRRHRATRK_					0	0	0		ENSG00000155269|ENST00000382487|GPR78	ENSG00000155269|ENST00000382487|GPR78	ENSG00000155269|ENST00000382487|GPR78	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.3113586306572	3	498.310052	1491.90833	2.2029	0.0010977	0.45615	0.00022731	2.6591	0.001325	498.3100895632981	88.952	0.76305	88.952	88.701	89.464	0					38	23	2	0	0	0	1.0402	1	37270	37270		0.094841	0.011491	1	1352500			27089	3412	13324	13381	31080	31080					0.18204966725102167
QKRRRHRATRK	11	Unmodified	_QKRRRHRATRK_					0	0	0		ENSG00000155269|ENST00000382487|GPR78	ENSG00000155269|ENST00000382487|GPR78	ENSG00000155269|ENST00000382487|GPR78	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.3116027712822	3	498.310052	1491.90833	3.2244	0.0016068	0.16561	8.2525E-05	3.39	0.0016893	498.30969825803487	88.797	1.0188	89.021	88.436	89.454	0.22359					69	31	3	0	0	0	1.0402	1	37276	37276		0.094841	0	1	1835800			27090	3412	13324	13381	31081	31081					0.18204966725102167
QKRRRRKHKR	10	Unmodified	_QKRRRRKHKR_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.6476928591728	3	483.646776	1447.9185	1.5369	0.00074333	-0.14883	-7.1981E-05	1.3881	0.00067135	483.6466589249497	33.618	1.0711	33.618	33.39	34.462	0					107	34	4	0	0	0	0.89803	1	14132	14132		0.13989	0.017027	1	18118000	+		27091	9231	13325	13382	31082	31082					0.21245574450313143
QKRRRRKHKR	10	Unmodified	_QKRRRRKHKR_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.6474792361259	3	483.646776	1447.9185	1.5369	0.00074333	-0.14883	-7.1981E-05	1.3881	0.00067135	483.6466589249497	33.618	1.0711	33.618	33.39	34.462	0					107	34	4	0	0	0	0.1256	1	14340	14340		0.12286	0.039514	1	18118000	+		27092	9231	13325	13382	31083	31083					0.21245574450313143
QKSKLTFVKE	10	Unmodified	_QKSKLTFVKE_					0	0	0			REV__tr|A0A553SI35|A0A553SI35_NIACIYwgAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14150PE=4SV=1	REV__tr|A0A553SI35|A0A553SI35_NIACIYwgAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_14150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3580810427666	2	604.355888	1206.69722	2.8873	0.001745	0.90535	0.00054716	3.7927	0.0022921	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	0.89803	1	36027	36027		1.1933	0	1	89814000	+		27093	14833	13326	13383	31084	31084					0.10214232119983535
QKSVSFILRYL	11	Unmodified	_QKSVSFILRYL_					0	0	0			REV__ENSG00000164935|ENST00000297581|DCSTAMP	REV__ENSG00000164935|ENST00000297581|DCSTAMP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3994018435478	2	677.398087	1352.78162	2.3612	0.0015995	-2.9383	-0.0019904	-0.57709	-0.00039092	677.3961024538366	83.881	0.65582	84.141	84.006	84.662	0.26083					29	20	3	0	0	0	1.0373	1	35096	35096		0.96228	0.56156	1	842160	+		27094	10756	13327	13384	31085	31085					0.11934182936761317
QKTIRMWLC	9	Unmodified	_QKTIRMWLC_					0	0	0		MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant;nc|ENSG00000196586|Q9UM54-5|MYO6;nc|ENSG00000196586|Q9UM54-2|MYO6;nc|ENSG00000196586|Q9UM54-6|MYO6;nc|ENSG00000196586|Q9UM54-4|MYO6;ENSG00000196586|ENST00000369977|MYO6;nc|ENSG00000196586|Q9UM54|MYO6	MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	MYO6|p.R980Tfs*5|1|0.29|ENSG00000196586|chr6:75891292-75891293|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	393.7401000857353	3	393.543945	1177.61	0.85987	0.00033839	-1.7116	-0.00067358	-0.85171	-0.00033519	393.5439588009199	56.363	0.54496	58.332	58.117	58.662	1.9684					25	17	3	0	0	0	0.11866	1	23766	23766		4.1895	0	1	1604900			27095	4949	13328	13385	31086	31086					0.02830411373088282
QKTKKKKEKRK	11	Unmodified	_QKTKKKKEKRK_					0	0	0		L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	L1MA4_dup3583|chr6:111280046-111281058:-|1.258269119965499|0.0665886712262598|4.24|422.0|24|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	715.4713622927666	2	715.469909	1428.92527	2.5987	0.0018593	-0.81054	-0.00057992	1.7882	0.0012794	715.4691616679838	105.78	0.14897	105.94	105.87	106.01	0.16679					26	7	5	0	0	0	1.0402	1	45072	45072		0	0	1	234260000			27096	7692	13329	13386	31087	31087					0.2279602976766455
QKVFEEFN	8	Unmodified	_QKVFEEFN_					0	0	0		nc|ENSG00000078053|P49418-2|AMPH;ENSG00000078053|ENST00000356264|AMPH	nc|ENSG00000078053|P49418-2|AMPH	nc|ENSG00000078053|P49418-2|AMPH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7575561404228	2	520.756007	1039.49746	2.7366	0.0014251	0.88772	0.00046229	3.6244	0.0018874	520.756242448538	80.494	0.36771	81.745	81.544	81.912	1.2512					42	11	5	0	0	0	0.8909	1	33817	33817		2.0598	0.21551	1	4902600			27097	970	13330	13387	31088	31088					-0.020708228277499074
QKVGWQRPE	9	Unmodified	_QKVGWQRPE_					0	0	0			REV__ENSG00000181234|ENST00000435159|TMEM132C	REV__ENSG00000181234|ENST00000435159|TMEM132C	MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3021728396416	2	564.301447	1126.58834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.39	1	103.44	102.94	103.94	0.059502								0	0	0	0.42693	1	43352	43352		3.5965	0	1		+		27098	11319	13331	13388	31089	31089					0.030110659403817408
QKVLLLTP	8	Unmodified	_QKVLLLTP_					0	0	0		ENST00000412159.1_1_X:65717811-65717952:+|nuORF	ENST00000412159.1_1_X:65717811-65717952:+|nuORF	ENST00000412159.1_1_X:65717811-65717952:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	911.5943481326103	1	911.59243	910.585153	3.1144	0.002839	-0.20018	-0.00018248	2.9142	0.0026566	911.5916480912178	106.1	0.14078	106.26	106.19	106.33	0.16174					17	7	3	0	0	0	0.89178	1	45310	45310		0.69038	0	1	44820000			27099	6387	13332	13389	31090	31090					0.1262842283365444
QKVPGGAG	8	Unmodified	_QKVPGGAG_					0	0	0			REV__ENST00000483623.2_1_10:45920489-45923843:+|nuORF	REV__ENST00000483623.2_1_10:45920489-45923843:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.2817260622978	2	357.20067	712.386788	1.913	0.00068331	2.997	0.0010705	4.91	0.0017538	357.2020807704517	105.98	0.28985	106.14	105.92	106.21	0.15859					23	14	2	0	0	0	2.3239	1	45175	45175		0.79363	0	1	7046600	+		27100	13380	13333	13390	31091	31091					0.019090019746727194
QKVTRKLLHRR	11	Unmodified	_QKVTRKLLHRR_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4832031130791	4	359.48366	1433.90553	-0.0088838	-3.1936E-06	-1.5329	-0.00055104	-1.5418	-0.00055424	359.4829911547571	26.427	1.0213	27.698	27.153	28.174	1.2715					132	32	5	0	0	0	1.0372	3	11031	10992;11031;11069		1.0136	0	1	23682000	+		27101	10240	13334	13391	31092;31093;31094	31093					0.20593698547577333
QKWEQALSV	9	Unmodified	_QKWEQALSV_					0	0	0		nc|ENSG00000148343|Q7L4E1-2|MIGA2;nc|ENSG00000148343|Q7L4E1-3|MIGA2;ENSG00000148343|ENST00000684074|MIGA2	nc|ENSG00000148343|Q7L4E1-2|MIGA2	nc|ENSG00000148343|Q7L4E1-2|MIGA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2526733279228	3	363.529346	1087.56621	-0.14122	-5.1336E-05	-0.4185	-0.00015214	-0.55972	-0.00020347	363.5290965559361	15.403	0.12392	16.442	16.364	16.488	1.0392					5	3	2	0	0	0	0.11938	1	6379	6379		1.1933	0	1	466450			27102	3205	13335	13392	31095	31095					0.025928414719373905
QKWIRTRKLKY	11	Unmodified	_QKWIRTRKLKY_					0	0	0		ENSG00000100749|ENST00000216639|VRK1;ENST00000555351.1_1_14:97263783-97319303:+|nuORF	ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3112670779228	3	507.312177	1518.9147	2.6784	0.0013588	-3.2628	-0.0016553	-0.58446	-0.0002965	507.31058123141855	88.571	0.93191	88.571	88.119	89.051	0					61	29	3	0	0	0	1.0402	1	37075	37075		0.094841	0.011491	1	985370			27103	1301	13336	13393	31096	31096					0.1760004711327383
QKWRLLQRTL	10	Unmodified	_QKWRLLQRTL_					0	0	0		ENST00000373230.7_1_10:71977665-71978554:-|nuORF	ENST00000373230.7_1_10:71977665-71978554:-|nuORF	ENST00000373230.7_1_10:71977665-71978554:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	671.4095947146416	2	671.409321	1340.80409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.291	1	95.48	94.98	95.98	1.1887								0	0	0	0.6624	1	39668	39668		0.40072	0	1				27104	6157	13337	13394	31097	31097					0.1473182712502421
QLADGLQYIFA	11	Unmodified	_QLADGLQYIFA_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;ENST00000573716.1_1_17:1581802-1582496:-|nuORF	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8258544802666	2	619.824421	1237.63429	3.5058	0.002173	-0.78888	-0.00048897	2.7169	0.001684	619.8244484410325	81.901	0.2835	83.571	83.387	83.671	1.67					13	8	2	0	0	0	0.17708	1	34366	34366		41.956	12.115	1	374840			27105	4323	13338	13395	31098	31098					0.024976663319421277
QLADGLQYIFA	11	Unmodified	_QLADGLQYIFA_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;ENST00000573716.1_1_17:1581802-1582496:-|nuORF	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	619.824421	1237.63429	2.2133	0.0013718	-0.63626	-0.00039437	1.577	0.00097746	619.8242795868736	83.164	0.18567	83.435	83.337	83.523	0.27029	-0.06845	0.00011853	NaN	41.956	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260060			27106	4323	13338	13395							0.024976663319421277
QLALYKII	8	Unmodified	_QLALYKII_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	321.2090637087822	3	321.207544	960.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.953	1	64.282	63.782	64.782	0.32899								0	0	0	1.0178	1	26796	26796		0.40072	0	1		+		27107	8644	13339	13396	31099	31099					0.11892709350718178
QLAQFVHEV	9	Unmodified	_QLAQFVHEV_					0	0	0		ENST00000539757.1_1_12:9440801-9462940:+|nuORF;nc|ENSG00000013573|Q96FC9-4|DDX11;nc|ENSG00000013573|Q96FC9-3|DDX11;ENSG00000013573|ENST00000542838|DDX11;nc|ENSG00000256263|A8MPP1|DDX11L8;nc|ENSG00000214826|Q92771|DDX12P;nc|ENSG00000013573|Q96FC9|DDX11;DDX11|p.S237C|1|0.08|ENSG00000013573|chr12:31089069-31089069|C/G|missense_variant;ENST00000543026.5_1_12:31240692-31242187:+|nuORF;ENST00000542244.5_1_12:31237807-31242486:+|nuORF;ENST00000542242.1_1_12:31240692-31242486:+|nuORF;ENST00000535158.5_1_12:31227017-31242187:+|nuORF;ENST00000536265.5_1_12:31227017-31242486:+|nuORF	ENST00000539757.1_1_12:9440801-9462940:+|nuORF	ENST00000539757.1_1_12:9440801-9462940:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1619750857353	2	535.785099	1069.55564	1.7486	0.00093685	0.79224	0.00042447	2.5408	0.0013613	535.785769573217	40.233	0.22146	40.545	40.412	40.634	0.31263					10	6	2	0	0	0	0.10844	1	16916	16916		11.64	6.8843	1	400000			27108	587	13340	13397	31100	31100					0.023648588175319674
QLCMRFSCV	9	2 Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))MRFSC(Carbamidomethyl (C))V_	QLC(1)MRFSC(1)V		QLC(46)MRFSC(46)V		0	2	0			REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.7686645388603	2	600.769754	1199.52495	1.8259	0.0010969	-3.7138	-0.0022311	-1.8879	-0.0011342	600.7664797083338	65.544	0.30641	67.452	67.28	67.586	1.9085					16	9	2	0	0	0	0.10993	1	27491	27491		46.021	17.534	1	2934400	+		27109	12451	13341	13398	31101	31101	22;23				-0.06682702155035258
QLCMRFSCV	9	2 Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))MRFSC(Carbamidomethyl (C))V_					0	2	0			REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	600.769754	1199.52495	2.1478	0.0012903	-4.0365	-0.002425	-1.8887	-0.0011347	600.767327259762	65.956	0.30385	67.355	67.184	67.488	1.3989	-0.048595	-0.00015321	NaN	46.021	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2706000	+		27110	12451	13341	13398			22;23				-0.06682702155035258
QLCMRFSCV	9	2 Carbamidomethyl (C)	_QLC(Carbamidomethyl (C))MRFSC(Carbamidomethyl (C))V_					0	2	0			REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	REV__ENST00000332303.5_2_15:29560805-29560991:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	600.769754	1199.52495	1.8259	0.0010969	-3.7138	-0.0022311	-1.8879	-0.0011342	600.7664797083338	65.544	0.30641	67.452	67.28	67.586	1.9085	0.048595	0.00023453	NaN	46.021	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2934400	+		27111	12451	13341	13398			22;23				-0.06682702155035258
QLDDLKVEL	9	Unmodified	_QLDDLKVEL_					0	0	0		ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF	ENSG00000136942|ENST00000348462|RPL35	ENSG00000136942|ENST00000348462|RPL35	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.7971679568291	2	536.797872	1071.58119	1.8703	0.001004	-0.28429	-0.00015261	1.586	0.00085139	536.7977720099813	52.679	0.34473	52.679	52.541	52.885	0					30	10	4	0	0	0	0.02878	2	21948	21948;22000		89.401	33.224	1	6414200			27112	2754	13342	13399	31102;31103	31102					0.0482628854927043
QLDDLKVEL	9	Unmodified	_QLDDLKVEL_					0	0	0		ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF	ENSG00000136942|ENST00000348462|RPL35	ENSG00000136942|ENST00000348462|RPL35	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.7991821169853	2	536.797872	1071.58119	1.7698	0.00095002	0.65723	0.0003528	2.427	0.0013028	536.7981571669925	52.142	0.30881	52.468	52.343	52.652	0.32554					29	9	4	0	0	0	0.0080158	2	21866	21818;21866		110.67	21.721	1	6759300			27113	2754	13342	13399	31104;31105	31105					0.0482628854927043
QLDDLKVEL	9	Unmodified	_QLDDLKVEL_					0	0	0		ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF	ENSG00000136942|ENST00000348462|RPL35	ENSG00000136942|ENST00000348462|RPL35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.7993041872978	2	536.797872	1071.58119	1.0465	0.00056174	-0.92219	-0.00049503	0.12428	6.6712E-05	536.797376080049	50.965	0.42366	52.359	52.197	52.621	1.3938					32	13	4	0	0	0	0.019486	2	21310	21310;21352		99.755	24.826	1	25748000			27114	2754	13342	13399	31106;31107	31106					0.0482628854927043
QLDDLKVEL	9	Unmodified	_QLDDLKVEL_					0	0	0		ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000446039.2_1_7:27309195-27309288:-|nuORF;ENST00000495728.1_1_9:127623696-127624209:-|nuORF;ENST00000450819.1_1_1:237144684-237145005:+|nuORF	ENSG00000136942|ENST00000348462|RPL35	ENSG00000136942|ENST00000348462|RPL35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.7947265505791	2	536.797872	1071.58119	1.2376	0.00066437	-2.1931	-0.0011773	-0.95548	-0.0005129	536.7965271179472	50.415	0.26745	52.39	52.248	52.515	1.9753					28	8	4	0	0	0	0.014947	2	21081	21081;21132		103.42	31.848	1	21966000			27115	2754	13342	13399	31108;31109	31108					0.0482628854927043
QLDEARGLLL	10	Unmodified	_QLDEARGLLL_					0	0	0		ENSG00000103549|ENST00000324685|RNF40;ENST00000566703.1_1_16:30776326-30777900:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF	ENSG00000103549|ENST00000324685|RNF40	ENSG00000103549|ENST00000324685|RNF40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3255493044853	2	564.324588	1126.63462	2.3522	0.0013274	-3.1204	-0.0017609	-0.76813	-0.00043347	564.3227318371344	49.786	0.2808	51.177	50.98	51.261	1.3911					14	8	3	0	0	0	0.4341	1	20842	20842		31.268	7.2478	1	854090			27116	1436	13343	13400	31110	31110					0.07637086051818187
QLDEARGLLL	10	Unmodified	_QLDEARGLLL_					0	0	0		ENSG00000103549|ENST00000324685|RNF40;ENST00000566703.1_1_16:30776326-30777900:+|nuORF;nc|ENSG00000103549|O75150-3|RNF40;ENST00000493683.5_1_16:30773821-30780773:+|nuORF	ENSG00000103549|ENST00000324685|RNF40	ENSG00000103549|ENST00000324685|RNF40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3256103396416	2	564.324588	1126.63462	1.7626	0.00099469	-1.2438	-0.00070192	0.51881	0.00029278	564.3232176502734	49.181	0.27839	51.159	51.008	51.286	1.9772					14	8	2	0	0	0	0.57775	1	20631	20631		24.021	3.5669	1	747190			27117	1436	13343	13400	31111	31111					0.07637086051818187
QLDPTLLQM	9	Unmodified	_QLDPTLLQM_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;CTCF|p.T204Nfs*26|1|0.4|ENSG00000102974|chr16:67611435-67611436|-/A|frameshift_variant;ENST00000566078.1_1_16:67644735-67645545:+|nuORF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7808105349541	2	529.781167	1057.54778	2.5199	0.001335	1.9472	0.0010316	4.4671	0.0023666	529.7815955531371	65.649	0.46173	67.048	66.817	67.279	1.3989					31	14	4	0	0	0	0.071837	1	27553	27553		59.368	21.193	1	1557100			27118	1409	13344	13401	31112	31112					0.021309635057377818
QLDPTLLQM	9	Unmodified	_QLDPTLLQM_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;CTCF|p.T204Nfs*26|1|0.4|ENSG00000102974|chr16:67611435-67611436|-/A|frameshift_variant;ENST00000566078.1_1_16:67644735-67645545:+|nuORF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7825195193291	2	529.781167	1057.54778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.228	1	67.137	66.637	67.637	1.9085								0	0	0	0.026166	1	27360	27360		76.825	32.966	1				27119	1409	13344	13401	31113	31113					0.021309635057377818
QLEADDAIQ	9	Unmodified	_QLEADDAIQ_					0	0	0			REV__INADL-EIF3E|1|fusion	REV__INADL-EIF3E|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7414733767509	2	501.740554	1001.46655	1.9725	0.00098967	0.16806	8.4325E-05	2.1405	0.001074	501.7409596059806	63.068	0.81265	65.012	64.532	65.345	1.9444					62	25	4	0	0	0	0.30098	1	26540	26540		25.399	0.72543	1	6830800	+		27120	14232	13345	13402	31114	31114					-0.03412020932660198
QLEADDAIQ	9	Unmodified	_QLEADDAIQ_					0	0	0			REV__INADL-EIF3E|1|fusion	REV__INADL-EIF3E|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	501.740554	1001.46655	2.3527	0.0011804	0.01463	7.3405E-06	2.3673	0.0011878	501.7408643909961	63.537	0.62184	64.95	64.753	65.375	1.4134	-0.031001	-6.9195E-05	NaN	25.399	48	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8260100	+		27121	14232	13345	13402							-0.03412020932660198
QLEADDAIQ	9	Unmodified	_QLEADDAIQ_					0	0	0			REV__INADL-EIF3E|1|fusion	REV__INADL-EIF3E|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	501.740554	1001.46655	1.9725	0.00098967	0.16806	8.4325E-05	2.1405	0.001074	501.7409596059806	63.068	0.81265	65.012	64.532	65.345	1.9444	0.031001	8.4773E-05	NaN	25.399	62	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6830800	+		27122	14232	13345	13402							-0.03412020932660198
QLEGLVPV	8	Unmodified	_QLEGLVPV_					0	0	0			REV__ENSG00000180043|ENST00000424985|GARIN5B	REV__ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.7547790408134	2	427.752736	853.490919	2.5587	0.0010945	3.4192	0.0014626	5.9778	0.002557	427.75398261244277	77.299	0.44559	78.58	78.346	78.791	1.2809					31	13	3	0	0	0	0.89176	1	32465	32465		0.79363	0	1	2154000	+		27123	11287	13346	13403	31115	31115					0.0583128401152635
QLEILYQKYLL	11	Unmodified	_QLEILYQKYLL_					0	0	0		nc|ENSG00000140836|Q15911-2|ZFHX3;ENSG00000140836|ENST00000268489|ZFHX3	nc|ENSG00000140836|Q15911-2|ZFHX3	nc|ENSG00000140836|Q15911-2|ZFHX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	475.9612914919853	3	475.278027	1422.81225	1.6829	0.00079986	2.3614	0.0011223	4.0443	0.0019222	475.6132806371034	50.177	0.72854	52.154	51.819	52.548	1.9772					42	23	3	0	0	0	0.14606	1	21133	21133		2.4348	0	1	2081600			27124	2937	13347	13404	31116	31116					0.1177591653113268
QLEKLIKKLRK	11	Unmodified	_QLEKLIKKLRK_					0	0	0		nc|ENSG00000122435|Q9NUP7-2|TRMT13;ENSG00000122435|ENST00000370141|TRMT13	nc|ENSG00000122435|Q9NUP7-2|TRMT13	nc|ENSG00000122435|Q9NUP7-2|TRMT13	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.7224609255791	2	698.971754	1395.92895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.135	1	45.135	44.635	45.635	0								0	0	0	0.63775	1	18887	18887		2.7352	1.0826	1				27125	2158	13348	13405	31117	31117					0.24682699541540387
QLEWPEAW	8	Unmodified	_QLEWPEAW_					0	0	0		ENST00000487162.1_1_22:50967153-50967951:-|nuORF;ENST00000476284.1_1_22:50964673-50968379:-|nuORF;ENSG00000025708|ENST00000252029|TYMP;nc|ENSG00000025708|P19971-2|TYMP	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	ENST00000487162.1_1_22:50967153-50967951:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	530.3267700076103	2	529.750724	1057.4869	2.047	0.0010844	0.79278	0.00041998	2.8398	0.0015044	529.7495744258231	66.149	0.35941	67.538	67.329	67.689	1.3888					23	11	3	0	0	0	2.3239	1	27714	27714		5.2307	0.47466	1	1038100			27126	625	13349	13406	31118	31118					-0.03954805482203483
QLFEDLVYL	9	Unmodified	_QLFEDLVYL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3043701052666	2	570.30279	1138.59103	2.5339	0.0014451	-0.11415	-6.5099E-05	2.4198	0.00138	570.3026317704571	91.591	0.45204	91.782	91.529	91.981	0.19042					22	13	2	0	0	0	0.091139	2	38375	38335;38375		52.268	31.815	1	1337900			27127	4351	13350	13407	31119;31120	31120					0.02727476554673558
QLFEDLVYL	9	Unmodified	_QLFEDLVYL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3057739138603	2	570.30279	1138.59103	4.1666	0.0023762	1.0006	0.00057064	5.1672	0.0029469	570.3032355243928	90.783	0.38382	91.765	91.558	91.942	0.98157					36	11	4	0	0	0	0.031377	3	38248	38200;38248;38287		85.272	45.315	1	5920600			27128	4351	13350	13407	31121;31122;31123	31122					0.02727476554673558
QLFEDLVYL	9	Unmodified	_QLFEDLVYL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3051025271416	2	570.30279	1138.59103	4.0229	0.0022943	0.15614	8.9046E-05	4.1791	0.0023833	570.3027945634014	90.32	0.38364	91.686	91.513	91.897	1.366					36	11	4	0	0	0	0.023786	3	38049	38000;38049;38088		96.285	56.327	1	4577500			27129	4351	13350	13407	31124;31125;31126	31125					0.02727476554673558
QLFEDLVYL	9	Unmodified	_QLFEDLVYL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	570.30279	1138.59103	1.8258	0.0010413	0.52342	0.00029851	2.3492	0.0013398	570.3029429799127	91.974	0.44083	91.974	91.787	92.228	0	0.17244	0.00016921	NaN	96.285	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1729900			27130	4351	13350	13407							0.02727476554673558
QLFEKQLQL	9	Unmodified	_QLFEKQLQL_					0	0	0		nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12;ENSG00000127947|ENST00000248594|PTPN12;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|3|fusion	nc|ENSG00000127947|Q05209-2|PTPN12	nc|ENSG00000127947|Q05209-2|PTPN12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8323242068291	2	573.829506	1145.64446	1.6218	0.00093066	1.1065	0.00063494	2.7283	0.0015656	573.8303032671922	48.287	0.19066	49.675	49.552	49.743	1.388					10	5	2	0	0	0	0.093059	1	20226	20226		51.63	18.844	1	1170700			27131	2349	13351	13408	31127	31127					0.07746274057171831
QLFEKQLQL	9	Unmodified	_QLFEKQLQL_					0	0	0		nc|ENSG00000127947|Q05209-2|PTPN12;nc|ENSG00000127947|Q05209-3|PTPN12;ENSG00000127947|ENST00000248594|PTPN12;PTPN12-RSBN1L|4|fusion;PTPN12-RSBN1L|5|fusion;PTPN12-RSBN1L|1|fusion;PTPN12-RSBN1L|2|fusion;PTPN12-RSBN1L|6|fusion;PTPN12-RSBN1L|3|fusion	nc|ENSG00000127947|Q05209-2|PTPN12	nc|ENSG00000127947|Q05209-2|PTPN12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8313476443291	2	573.829506	1145.64446	2.4856	0.0014263	0.51132	0.00029341	2.9969	0.0017197	573.8297418406083	47.752	0.18633	49.728	49.649	49.836	1.976					9	5	2	0	0	0	0.10473	1	20006	20006		47.749	7.799	1	862310			27132	2349	13351	13408	31128	31128					0.07746274057171831
QLFLLVNR	8	Unmodified	_QLFLLVNR_					0	0	0			REV__ENSG00000071553|ENST00000369762|ATP6AP1	REV__ENSG00000071553|ENST00000369762|ATP6AP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.8082153201103	2	501.808377	1001.6022	1.7263	0.00086625	-3.3427	-0.0016774	-1.6164	-0.00081114	501.8063087978377	78.581	1.2359	78.581	78.001	79.237	0					73	39	3	0	0	0	0.89051	1	32826	32826		2.3027	0	1	2518700	+		27133	8726	13352	13409	31129	31129					0.10146343439464545
QLFSQQHFL	9	Unmodified	_QLFSQQHFL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;TNRC18|p.K2750Rfs*164|1|0.14|ENSG00000182095|chr7:5312642-5312643|-/C|frameshift_variant	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.2984496951103	2	574.298373	1146.58219	1.8359	0.0010544	0.84408	0.00048476	2.68	0.0015391	574.2991666096826	51.104	0.34844	51.104	50.913	51.261	0					21	10	3	0	0	0	0.10993	2	21288	21288;21343		46.021	26.764	1	1554800			27134	4596	13353	13410	31130;31131	31130					0.014765477088531043
QLFSQQHFL	9	Unmodified	_QLFSQQHFL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;TNRC18|p.K2750Rfs*164|1|0.14|ENSG00000182095|chr7:5312642-5312643|-/C|frameshift_variant	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8004028201103	2	574.298373	1146.58219	1.6085	0.00092377	1.38	0.00079252	2.9885	0.0017163	574.2993323147922	50.563	0.40616	50.891	50.698	51.104	0.32824					22	12	3	0	0	0	0.076627	2	21159	21159;21203		57.471	26.764	1	1900700			27135	4596	13353	13410	31132;31133	31132					0.014765477088531043
QLFSQQHFL	9	Unmodified	_QLFSQQHFL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;TNRC18|p.K2750Rfs*164|1|0.14|ENSG00000182095|chr7:5312642-5312643|-/C|frameshift_variant	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.2993652224541	2	574.298373	1146.58219	1.7635	0.0010128	-0.15132	-8.6903E-05	1.6122	0.00092587	574.2984516212873	49.255	0.43575	50.646	50.421	50.857	1.3911					24	13	2	0	0	0	0.0054014	1	20602	20602		120.45	64.273	1	3202700			27136	4596	13353	13410	31134	31134					0.014765477088531043
QLFSQQHFL	9	Unmodified	_QLFSQQHFL_					0	0	0		ENSG00000182095|ENST00000430969|TNRC18;nc|ENSG00000182095|O15417-2|TNRC18;TNRC18|p.K2750Rfs*164|1|0.14|ENSG00000182095|chr7:5312642-5312643|-/C|frameshift_variant	ENSG00000182095|ENST00000430969|TNRC18	ENSG00000182095|ENST00000430969|TNRC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.2994262576103	2	574.298373	1146.58219	1.9606	0.0011259	-0.63532	-0.00036486	1.3252	0.00076108	574.2982082507838	48.709	0.40374	50.686	50.483	50.886	1.9772					23	12	2	0	0	0	0.00090036	1	20419	20419		133.7	77.525	1	4074200			27137	4596	13353	13410	31135	31135					0.014765477088531043
QLHLKPLRK	9	Unmodified	_QLHLKPLRK_					0	0	0		L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2503234744072	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.38	1	93.316	92.816	93.816	0.93623								0	0	0	0.42693	1	38902	38902		0.23584	0	1				27138	7778	13354	13411	31136	31136					0.1634538552182221
QLHLKPLRK	9	Unmodified	_QLHLKPLRK_					0	0	0		L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2499267458916	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.548	1	93.875	93.375	94.375	1.3269								0	0	0	0.42693	1	38953	38953		0.23584	0	1				27139	7778	13354	13411	31137	31137					0.1634538552182221
QLHLKPLRK	9	Unmodified	_QLHLKPLRK_					0	0	0		L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|17|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2493774294853	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.208	1	94.485	93.985	94.985	1.277								0	0	0	0.42693	1	39221	39221		0.23584	0	1				27140	7778	13354	13411	31138	31138					0.1634538552182221
QLHLLGPSVL	10	Unmodified	_QLHLLGPSVL_					0	0	0			REV__ENST00000425203.1_1_22:31644623-31654315:+|nuORF	REV__ENST00000425203.1_1_22:31644623-31654315:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	359.7353088259697	3	359.553603	1075.63898	-0.41395	-0.00014884	1.9606	0.00070493	1.5466	0.00055609	359.5543260719414	30.35	0.46376	31.632	31.502	31.965	1.2825					21	14	2	0	0	0	0.12455	1	12710	12710		17.443	6.6431	1	457100	+		27141	12993	13355	13412	31139	31139					0.10418595265377917
QLHRRRSRERQ	11	Unmodified	_QLHRRRSRERQ_					0	0	0		ENST00000517974.1_1_8:117671049-117768052:-|nuORF	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	ENST00000517974.1_1_8:117671049-117768052:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	760.9393188357353	2	761.432713	1520.85087	2.2228	0.0016925	2.9391	0.0022379	5.1618	0.0039304	761.4366602146409	85.61	1.1775	86.736	86.386	87.563	1.1265					143	48	5	0	0	0	0.14606	1	36094	36094		0	0	1	30421000			27142	7058	13356	13413	31140	31140					0.11128079728882767
QLHYFNSI	8	Unmodified	_QLHYFNSI_					0	0	0			REV__AKR1B1|p.N163Y|1|0.03|ENSG00000085662|chr7:134449062-134449062|T/A|missense_variant	REV__AKR1B1|p.N163Y|1|0.03|ENSG00000085662|chr7:134449062-134449062|T/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.7587768435478	2	511.258717	1020.50288	2.8943	0.0014797	0.60682	0.00031024	3.5011	0.00179	511.2585026199615	75.477	0.64365	76.784	76.343	76.987	1.3063					27	20	2	0	0	0	2.3239	1	31663	31663		14.582	0	1	1283200	+		27143	8097	13357	13414	31141	31141					-0.006550992452844184
QLIAIPTA	8	Unmodified	_QLIAIPTA_					0	0	0		nc|ENSG00000168916|Q9ULD9-2|ZNF608;ENSG00000168916|ENST00000513986|ZNF608	nc|ENSG00000168916|Q9ULD9-2|ZNF608	nc|ENSG00000168916|Q9ULD9-2|ZNF608	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7545654177666	2	413.755278	825.496004	0.55001	0.00022757	-3.6234	-0.0014992	-3.0734	-0.0012717	413.7540015914325	67.134	1.3383	67.134	66.512	67.85	0					89	42	3	0	0	0	0.88663	2	27868	27868;28050		4.756	0	1	5692800			27144	4060	13358	13415	31142;31143	31142					0.07627587874117125
QLIAIPTA	8	Unmodified	_QLIAIPTA_					0	0	0		nc|ENSG00000168916|Q9ULD9-2|ZNF608;ENSG00000168916|ENST00000513986|ZNF608	nc|ENSG00000168916|Q9ULD9-2|ZNF608	nc|ENSG00000168916|Q9ULD9-2|ZNF608	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	413.755278	825.496004	2.0116	0.00083231	-3.4045	-0.0014086	-1.3929	-0.00057631	413.7541091530257	65.999	1.0651	67.397	66.757	67.822	1.3989	0.077149	0.00032334	NaN	4.756	57	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2188000			27145	4060	13358	13415							0.07627587874117125
QLIDAVLNL	9	Unmodified	_QLIDAVLNL_					0	0	0		ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7986633181572	2	499.797675	997.580796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.239	1	83.451	82.951	83.951	1.2125								0	0	0	0.041747	1	34524	34524		46.021	13.715	1				27146	3801	13359	13416	31144	31144					0.08190913620080664
QLIDIIHTA	9	Unmodified	_QLIDIIHTA_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.2988769412041	2	512.295299	1022.57605	2.4861	0.0012736	-1.3913	-0.00071274	1.0949	0.00056091	512.2964640221965	50.472	0.2154	51.866	51.77	51.986	1.3938					14	6	3	0	0	0	0.083604	1	21168	21168		54.774	20.671	1	938090			27147	2747	13360	13417	31145	31145					0.06566029477323809
QLIDIIHTA	9	Unmodified	_QLIDIIHTA_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2966796755791	2	512.295299	1022.57605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.978	1	51.955	51.455	52.455	1.9772								0	0	0	0.0475	1	20932	20932		54.774	20.671	1				27148	2747	13360	13417	31146	31146					0.06566029477323809
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.8332397341728	2	571.832049	1141.64954	1.7521	0.0010019	0.57408	0.00032828	2.3262	0.0013302	571.8324529080712	64.005	0.43783	64.005	63.832	64.27	0					40	13	4	0	0	0	3.7622E-05	3	26699	26654;26699;26738		158.2	89.098	1	4854000			27149	2411	13361	13418	31147;31148;31149	31148					0.08438577919810086
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.8335449099541	2	571.832049	1141.64954	1.7856	0.0010211	0.053502	3.0594E-05	1.8391	0.0010517	571.8321590790158	63.477	0.39669	63.806	63.631	64.027	0.32899					38	12	4	0	0	0	3.1987E-07	3	26596	26549;26596;26653		191.38	116.45	1	6479300			27150	2411	13361	13418	31150;31151;31152	31151					0.08438577919810086
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8336669802666	2	571.832049	1141.64954	2.8817	0.0016479	0.30691	0.0001755	3.1886	0.0018234	571.8319856460387	62.281	0.53206	63.699	63.459	63.992	1.4177					50	16	5	0	0	0	3.6781E-07	3	26117	26070;26117;26159		189.78	100.87	1	16941000			27151	2411	13361	13418	31153;31154;31155	31154					0.08438577919810086
QLIDKVWQL	9	Unmodified	_QLIDKVWQL_					0	0	0		nc|ENSG00000129657|Q92503-3|SEC14L1;ENSG00000129657|ENST00000436233|SEC14L1;nc|ENSG00000129657|Q92503-2|SEC14L1;ENST00000587491.5_1_17:75207779-75210102:+|nuORF	nc|ENSG00000129657|Q92503-3|SEC14L1	nc|ENSG00000129657|Q92503-3|SEC14L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8331176638603	2	571.832049	1141.64954	2.6244	0.0015007	-0.078791	-4.5055E-05	2.5456	0.0014557	571.8317945997686	61.686	0.59681	63.643	63.465	64.061	1.9571					45	18	4	0	0	0	8.8071E-11	3	25936	25858;25894;25936		208.15	119.24	1	15231000			27152	2411	13361	13418	31156;31157;31158	31158					0.08438577919810086
QLIGLKTGLP	10	Unmodified	_QLIGLKTGLP_					0	0	0			REV__ENST00000448704.5_1_7:43687258-43687378:-|nuORF	REV__ENST00000448704.5_1_7:43687258-43687378:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2212097048759	3	347.221853	1038.64373	1.3494	0.00046853	-3.4205	-0.0011877	-2.0711	-0.00071914	347.22132191090145	47.074	0.55872	47.404	47.077	47.636	0.33034					41	17	3	0	0	0	0.89422	1	19766	19766		0.77653	0	1	2146300	+		27153	13115	13362	13419	31159	31159					0.12595479408128085
QLILRLLVVL	10	Unmodified	_QLILRLLVVL_					0	0	0		tr|A0A553SSP6|A0A553SSP6_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03505PE=4SV=1	tr|A0A553SSP6|A0A553SSP6_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03505PE=4SV=1	tr|A0A553SSP6|A0A553SSP6_NIACIMurR/RpiRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03505PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	590.4113647341728	2	590.413009	1178.81146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.902	1	88.902	88.402	89.402	0								0	0	0	0.66237	1	37166	37166		0.45834	0.10771	1				27154	16622	13363	13420	31160	31160					0.2292116667274513
QLIVGVNK	8	Unmodified	_QLIVGVNK_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000325349.6_1_12:17144017-17144188:+|nuORF;ENST00000451469.1_1_3:39400337-39400661:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7749206423759	2	435.774003	869.533452	1.3228	0.00057646	0.57049	0.00024861	1.8933	0.00082506	435.77432563905154	22.412	0.22337	23.589	23.476	23.699	1.177					12	6	3	0	0	0	0.15741	1	9369	9369		85.357	0	1	1347300			27155	1331	13364	13421	31161	31161					0.09346679139764547
QLIVGVNK	8	Unmodified	_QLIVGVNK_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1;ENST00000434005.1_1_7:22551057-22551540:-|nuORF;ENST00000417549.1_1_13:28788954-28789521:+|nuORF;ENST00000359165.5_1_12:19610040-19610154:-|nuORF;ENST00000325349.6_1_12:17144017-17144188:+|nuORF;ENST00000451469.1_1_3:39400337-39400661:+|nuORF	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7740966677666	2	435.774003	869.533452	0.5765	0.00025122	0.72922	0.00031777	1.3057	0.000569	435.7741909027392	21.987	0.21953	23.603	23.486	23.706	1.6158					15	6	3	0	0	0	0.35495	1	9167	9167		64.236	0	1	1163500			27156	1331	13364	13421	31162	31162					0.09346679139764547
QLKENVRP	8	Unmodified	_QLKENVRP_					0	0	0			REV__ENSG00000101425|ENST00000642449|BPI	REV__ENSG00000101425|ENST00000642449|BPI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2854797244072	2	492.285266	982.555979	1.5499	0.000763	-0.30422	-0.00014976	1.2457	0.00061323	492.28486021892417	77.611	0.43206	77.611	77.409	77.841	0					30	13	3	0	0	0	0.89178	1	32347	32347		0.69038	0	1	2971900	+		27157	9035	13365	13422	31163	31163					0.06400278537364557
QLKERKRKKK	10	Unmodified	_QLKERKRKKK_					0	0	0			REV__nc|ENSG00000138795|Q9UJU2-5|LEF1	REV__nc|ENSG00000138795|Q9UJU2-5|LEF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	671.4446288943291	2	671.443695	1340.87284	2.9393	0.0019736	-0.80393	-0.0005398	2.1354	0.0014338	671.4429127021224	107.3	0.2103	107.46	107.33	107.54	0.15796					38	10	5	0	0	0	0.89803	1	46024	46024		1.4819	0	1	284130000	+		27158	10083	13366	13423	31164	31164					0.216034914247075
QLKILRPQVF	10	Unmodified	_QLKILRPQVF_					0	0	0		ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.3948852419853	2	621.390065	1240.76558	2.9523	0.0018346	3.3568	0.0020859	6.3091	0.0039204	621.3920755885956	91.335	0.4286	92.701	92.438	92.867	1.366					38	13	3	0	0	0	0.89646	1	38393	38393		1.8442	0	1	10777000			27159	4995	13367	13424	31165	31165					0.15482521490503132
QLKKIRRV	8	Unmodified	_QLKKIRRV_					0	0	0			REV__tr|A0A553SGX5|A0A553SGX5_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_11760PE=4SV=1	REV__tr|A0A553SGX5|A0A553SGX5_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_11760PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	521.2925292849541	2	520.856193	1039.69783	1.8556	0.00096651	2.2752	0.0011851	4.1308	0.0021516	520.8576928716211	68.787	0.3745	68.787	68.612	68.986	0					25	11	3	0	0	0	2.3239	1	28597	28597		5.7604	0	1	1715300	+		27160	14771	13368	13425	31166	31166					0.17957116350362412
QLKKKRAAT	9	Unmodified	_QLKKKRAAT_					0	0	0		DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant;ENSG00000124228|ENST00000618172|DDX27;nc|ENSG00000124228|Q96GQ7|DDX27;DDX27|p.C321Vfs*21|1|0.11|ENSG00000124228|chr20:49228875-49228876|-/G|frameshift_variant;ENST00000484427.5_1_20:47835892-47850293:+|nuORF	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	DDX27|p.E703Dfs*18|1|0.04|ENSG00000124228|chr20:49242105-49242106|-/TTTGCAGCCCGTGGCTTCCTGTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1043.672778308392	1	1043.66839	1042.66111	4.3321	0.0045213	-0.055918	-5.836E-05	4.2762	0.0044629	1043.6683512921497	107.55	0.15018	107.71	107.62	107.77	0.15795					16	7	3	0	0	0	0.85019	1	46234	46234		0.52476	0	1	37972000			27161	398	13369	13426	31167	31167					0.14148819733782148
QLKMWVDR	8	Unmodified	_QLKMWVDR_					0	0	0			REV__ENST00000421648.1_1_7:143104969-143112281:+|nuORF	REV__ENST00000421648.1_1_7:143104969-143112281:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.9615966677666	2	538.289494	1074.56443	0.86729	0.00046685	1.8471	0.00099426	2.7144	0.0014611	538.2905659485297	19.205	0.21833	20.263	20.164	20.383	1.0585					13	6	3	0	0	0	2.3239	1	7977	7977		7.2892	1.0834	1	445190	+		27162	12978	13370	13427	31168	31168					0.03013509182346752
QLKTVKMKILQ	11	Unmodified	_QLKTVKMKILQ_					0	0	0		ENST00000217246.8_1_20:15913977-15948236:+|nuORF	ENST00000217246.8_1_20:15913977-15948236:+|nuORF	ENST00000217246.8_1_20:15913977-15948236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	665.4194213747978	2	665.417965	1328.82138	2.633	0.001752	0.66966	0.0004456	3.3027	0.0021976	665.4178976388522	95.834	0.2779	95.958	95.801	96.079	0.12331					32	9	5	0	0	0	1.0362	1	40088	40088		1.3295	1.0225	1	27195000			27163	5523	13371	13428	31169	31169					0.17011986615807473
QLKVKMYS	8	Unmodified	_QLKVKMYS_					0	0	0		ENST00000532280.1_1_9:33675440-33676694:-|nuORF	ENST00000532280.1_1_9:33675440-33676694:-|nuORF	ENST00000532280.1_1_9:33675440-33676694:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.7830688357353	2	498.78097	995.547388	2.4912	0.0012426	2.6738	0.0013337	5.165	0.0025762	498.7821660877099	80.254	0.34189	80.545	80.343	80.685	0.29056					18	10	2	0	0	0	0.8909	1	33533	33533		2.0598	0	1	709910			27164	7175	13372	13429	31170	31170					0.04943588576543334
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5126525759697	3	381.513479	1141.51861	-0.75121	-0.0002866	-2.4514	-0.00093523	-3.2026	-0.0012218	381.5130736245701	30.473	4.4338	30.473	28.597	33.031	0					266	143	2	0	0	0	0.31127	3	12229	12229;13410;13510		24.882	5.7264	1	2428000	+		27165	9951	13373	13430	31171;31172;31173	31171					-0.04649180790556784
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5122558474541	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.406	1	25.406	24.906	25.906	0								0	0	0	0.33718	1	10603	10603		14.957	0.55178	1		+		27166	9951	13373	13430	31174	31174					-0.04649180790556784
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5112182497978	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.947	1	42.947	42.447	43.447	0								0	0	0	0.4034	1	17976	17976		8.4443	0.28878	1		+		27167	9951	13373	13430	31175	31175					-0.04649180790556784
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5121032595634	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.43	1	43.43	42.93	43.93	0								0	0	0	0.35181	1	18182	18182		13.519	0.64606	1		+		27168	9951	13373	13430	31176	31176					-0.04649180790556784
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5125305056572	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.73	1	43.73	43.23	44.23	0								0	0	0	0.32379	1	18303	18303		16.275	2.6597	1		+		27169	9951	13373	13430	31177	31177					-0.04649180790556784
QLLDHECER	9	Unmodified	_QLLDHECER_					0	0	0			REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	REV__nc|ENSG00000135686|Q8N4N3-2|KLHL36	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5139343142509	3	381.513479	1141.51861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.856	1	48.856	48.356	49.356	0								0	0	0	0.42693	1	20400	20400		3.5871	0.59182	1		+		27170	9951	13373	13430	31178	31178					-0.04649180790556784
QLLDQVEQI	9	Unmodified	_QLLDQVEQI_					0	0	0		nc|ENSG00000158604|Q7Z7H5-3|TMED4;nc|ENSG00000158604|Q7Z7H5-2|TMED4;ENSG00000158604|ENST00000457408|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.2970458865166	2	543.295496	1084.57644	1.643	0.00089265	0.95593	0.00051935	2.599	0.001412	543.295912756747	56.55	0.23477	56.55	56.458	56.693	0					13	7	2	0	0	0	0.049839	1	23594	23594		68.081	15.812	1	985000			27171	3504	13374	13431	31179	31179					0.03753404406529626
QLLDQVEQI	9	Unmodified	_QLLDQVEQI_					0	0	0		nc|ENSG00000158604|Q7Z7H5-3|TMED4;nc|ENSG00000158604|Q7Z7H5-2|TMED4;ENSG00000158604|ENST00000457408|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2966796755791	2	543.295496	1084.57644	1.3714	0.00074508	0.19062	0.00010356	1.562	0.00084865	543.295742546061	55.221	0.34621	56.631	56.476	56.822	1.4099					28	11	3	0	0	0	0.002761	2	23163	23109;23163		128.37	20.368	1	7227400			27172	3504	13374	13431	31180;31181	31181					0.03753404406529626
QLLDQVEQI	9	Unmodified	_QLLDQVEQI_					0	0	0		nc|ENSG00000158604|Q7Z7H5-3|TMED4;nc|ENSG00000158604|Q7Z7H5-2|TMED4;ENSG00000158604|ENST00000457408|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2966796755791	2	543.295496	1084.57644	0.96951	0.00052673	0.28739	0.00015614	1.2569	0.00068287	543.295812706208	54.849	0.3485	56.817	56.639	56.988	1.9684					28	11	3	0	0	0	0.002761	2	23015	22965;23015		128.37	18.476	1	4392600			27173	3504	13374	13431	31182;31183	31183					0.03753404406529626
QLLDQVEQI	9	Unmodified	_QLLDQVEQI_					0	0	0		nc|ENSG00000158604|Q7Z7H5-3|TMED4;nc|ENSG00000158604|Q7Z7H5-2|TMED4;ENSG00000158604|ENST00000457408|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	nc|ENSG00000158604|Q7Z7H5-3|TMED4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	543.295496	1084.57644	2.1956	0.0011928	-1.6707	-0.00090769	0.52486	0.00028515	543.293645388986	56.298	0.2576	56.619	56.473	56.731	0.32103	-0.035144	-0.0022276	NaN	128.37	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1053100			27174	3504	13374	13431							0.03753404406529626
QLLDTLEQL	9	Unmodified	_QLLDTLEQL_					0	0	0			REV__ENSG00000155827|ENST00000389120|RNF20	REV__ENSG00000155827|ENST00000389120|RNF20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.7983276247978	2	536.797872	1071.58119	1.0465	0.00056174	-0.92219	-0.00049503	0.12428	6.6712E-05	536.797376080049	50.965	0.42366	52.359	52.197	52.621	1.3938					32	13	4	0	0	0	0.033102	1	21396	21396		82.529	16.073	1	25748000	+		27175	10503	13375	13432	31184	31184					0.0482628854927043
QLLEFNGINL	10	Unmodified	_QLLEFNGINL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	580.8195678591728	2	580.819138	1159.62372	2.3042	0.0013384	0.99243	0.00057642	3.2967	0.0019148	580.81928953165	83.832	0.27927	83.832	83.658	83.937	0					14	8	2	0	0	0	0.24174	1	34916	34916		43.858	18.459	1	1109700			27176	3279	13376	13433	31185	31185					0.05029683677548746
QLLEFNGINL	10	Unmodified	_QLLEFNGINL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.8217040896416	2	580.819138	1159.62372	2.2296	0.001295	1.3714	0.00079656	3.601	0.0020915	580.8196754257259	83.314	0.33967	83.584	83.461	83.801	0.27029					19	10	3	0	0	0	0.81324	1	34858	34858		10.824	0	1	912150			27177	3279	13376	13433	31186	31186					0.05029683677548746
QLLEFNGINL	10	Unmodified	_QLLEFNGINL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8203002810478	2	580.819138	1159.62372	3.4212	0.0019871	0.84269	0.00048945	4.2639	0.0024765	580.8193839877435	82.48	0.38376	83.693	83.505	83.889	1.2125					26	11	3	0	0	0	0.12991	2	34599	34599;34648		58.679	26.373	1	2698900			27178	3279	13376	13433	31187;31188	31187					0.05029683677548746
QLLEFNGINL	10	Unmodified	_QLLEFNGINL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8229858279228	2	580.819138	1159.62372	3.5759	0.002077	0.88343	0.00051311	4.4594	0.0025901	580.8198003369955	82.044	0.31721	83.715	83.575	83.892	1.67					20	9	3	0	0	0	0.10797	2	34442	34392;34442		62.573	30.192	1	2256900			27179	3279	13376	13433	31189;31190	31190					0.05029683677548746
QLLEFNGINL	10	Unmodified	_QLLEFNGINL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	580.819138	1159.62372	2.2296	0.001295	1.3714	0.00079656	3.601	0.0020915	580.8196754257259	83.314	0.33967	83.584	83.461	83.801	0.27029	-0.1215	0.00039674	NaN	62.573	19	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	912150			27180	3279	13376	13433							0.05029683677548746
QLLEKVIEL	9	Unmodified	_QLLEKVIEL_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-3|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.8356811404228	2	542.834257	1083.65396	1.9326	0.0010491	0.93121	0.00050549	2.8638	0.0015546	542.8347941351831	60.856	0.53481	60.856	60.637	61.172	0					46	16	4	0	0	0	9.5669E-06	4	25372	25328;25372;25412;25453		181.69	16.06	1	13004000			27181	1174	13377	13434	31191;31192;31193;31194	31192					0.11548042342701592
QLLEKVIEL	9	Unmodified	_QLLEKVIEL_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-3|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.8362304568291	2	542.834257	1083.65396	2.2573	0.0012253	1.1957	0.00064906	3.453	0.0018744	542.8349304496097	60.226	0.50383	60.554	60.32	60.824	0.32809					46	15	4	0	0	0	7.5632E-16	4	25228	25181;25228;25267;25312		216.57	47.907	1	14287000			27182	1174	13377	13434	31195;31196;31197;31198	31196					0.11548042342701592
QLLEKVIEL	9	Unmodified	_QLLEKVIEL_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-3|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3359863162041	2	542.834257	1083.65396	2.0063	0.0010891	-2.8112	-0.001526	-0.80484	-0.0004369	542.832544624435	58.978	0.42128	60.398	60.166	60.587	1.4196					43	13	4	0	0	0	0.04812	1	24709	24709		69.105	10.426	1	40661000			27183	1174	13377	13434	31199	31199					0.11548042342701592
QLLEKVIEL	9	Unmodified	_QLLEKVIEL_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-3|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8366577029228	2	542.834257	1083.65396	5.5724	0.0030249	-1.2948	-0.00070288	4.2775	0.002322	542.833386548973	89.143	0.29025	90.163	89.977	90.268	1.0199					14	8	2	0	0	0	0.39927	1	37562	37562		20.454	1.1966	1	864480			27184	1174	13377	13434	31200	31200					0.11548042342701592
QLLEKVIEL	9	Unmodified	_QLLEKVIEL_					0	0	0		ENST00000368287.1_1_6:127648134-127664493:-|nuORF;nc|ENSG00000093144|Q9NTX5-5|ECHDC1;nc|ENSG00000093144|Q9NTX5-6|ECHDC1;ENSG00000093144|ENST00000454859|ECHDC1;nc|ENSG00000093144|Q9NTX5|ECHDC1;nc|ENSG00000093144|Q9NTX5-4|ECHDC1;nc|ENSG00000093144|Q9NTX5-3|ECHDC1	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	ENST00000368287.1_1_6:127648134-127664493:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	542.834257	1083.65396	2.6389	0.0014325	0.2427	0.00013174	2.8816	0.0015642	543.3355617058905	89.954	0.29032	90.163	89.985	90.275	0.20904	7.4004E-05	0.0008544	NaN	20.454	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	396080			27185	1174	13377	13434							0.11548042342701592
QLLFYLLGLW	10	Unmodified	_QLLFYLLGLW_					0	0	0		tr|A0A7D6VRV7|A0A7D6VRV7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08505PE=4SV=1	tr|A0A7D6VRV7|A0A7D6VRV7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08505PE=4SV=1	tr|A0A7D6VRV7|A0A7D6VRV7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3715087771416	2	633.368267	1264.72198	2.3357	0.0014794	0.61045	0.00038664	2.9462	0.001866	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	0.89803	1	34177	34177		0.45834	0	1	11549000			27186	16847	13378	13435	31201	31201					0.10020911993365189
QLLGDLLNI	9	Unmodified	_QLLGDLLNI_					0	0	0			REV__ENSG00000168038|ENST00000301831|ULK4	REV__ENSG00000168038|ENST00000301831|ULK4	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.7966491580009	2	499.797675	997.580796	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.443	1	83.443	82.943	83.943	0								0	0	0	0.29347	1	34770	34770		19.257	3.4098	1		+		27187	10894	13379	13436	31202	31202					0.08190913620080664
QLLGHAPVLL	10	Unmodified	_QLLGHAPVLL_					0	0	0		nc|ENSG00000059122|Q4VC44-3|FLYWCH1	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	nc|ENSG00000059122|Q4VC44-3|FLYWCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8309814333916	2	530.829309	1059.64407	3.1864	0.0016914	2.0833	0.0011059	5.2697	0.0027973	530.829878375608	62.446	0.33692	64.403	64.208	64.545	1.9571					23	10	3	0	0	0	0.48057	1	26239	26239		28.487	0.85804	1	3487800			27188	7823	13380	13437	31203	31203					0.11662899127986748
QLLGRRHYSLR	11	Unmodified	_QLLGRRHYSLR_					0	0	0		chr2:67126390-67128775|165|15.05|0.61|4.62|-|1|LINC01829,None|1;chr2:67124863-67128775|155|14.13|0.74|4.25|-|1|LINC01829,None|1	chr2:67126390-67128775|165|15.05|0.61|4.62|-|1|LINC01829,None|1	chr2:67126390-67128775|165|15.05|0.61|4.62|-|1|LINC01829,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9455749392509	3	466.940743	1397.8004	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.159	1	88.159	87.659	88.659	0								0	0	0	0.63775	1	36853	36853		0.40827	0.041592	1				27189	242	13381	13438	31204	31204					0.11741157351161746
QLLHHTRRQLL	11	Unmodified	_QLLHHTRRQLL_					0	0	0		ENSG00000255181|ENST00000542437|CCDC166	ENSG00000255181|ENST00000542437|CCDC166	ENSG00000255181|ENST00000542437|CCDC166	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2880737185478	3	472.28451	1413.8317	3.7175	0.0017557	-2.1972	-0.0010377	1.5203	0.00071802	472.2834594253891	86.491	0.75181	87.618	87.462	88.214	1.1265					52	27	3	0	0	0	1.0357	1	36511	36511		0.50596	0	1	4213400			27190	5400	13382	13439	31205	31205					0.14133730385265153
QLLIKGDNII	10	Unmodified	_QLLIKGDNII_					0	0	0			REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2333557009697	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.52	1	82.52	82.02	83.02	0								0	0	0	0.66218	1	34378	34378		0.77653	0	1		+		27191	15594	13383	13440	31206	31206					0.11794847091277916
QLLIKGDNII	10	Unmodified	_QLLIKGDNII_					0	0	0			REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2333862185478	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.685	1	82.685	82.185	83.185	0								0	0	0	0.66218	1	34448	34448		0.77653	0	1		+		27192	15594	13383	13440	31207	31207					0.11794847091277916
QLLIKGDNII	10	Unmodified	_QLLIKGDNII_					0	0	0			REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2323791384697	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.912	1	61.24	60.74	61.74	0.32809								0	0	0	0.66218	1	25521	25521		0.77653	0	1		+		27193	15594	13383	13440	31208	31208					0.11794847091277916
QLLIKGDNII	10	Unmodified	_QLLIKGDNII_					0	0	0			REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	REV__tr|A0A7D6W1R9|A0A7D6W1R9_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04270PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2342712283134	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.342	1	95.531	95.031	96.031	1.1887								0	0	0	0.66218	1	39690	39690		0.77653	0	1		+		27194	15594	13383	13440	31209	31209					0.11794847091277916
QLLLLLLLGR	10	Unmodified	_QLLLLLLLGR_					0	0	0			REV__ENSG00000164932|ENST00000330295|CTHRC1	REV__ENSG00000164932|ENST00000330295|CTHRC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3954345583916	2	576.397359	1150.78016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.627	1	78.937	78.437	79.437	0.30933								0	0	0	0.6624	1	32872	32872		0.40072	0.050084	1		+		27195	10755	13384	13441	31210	31210					0.21080593638657774
QLLLSERSI	9	Unmodified	_QLLLSERSI_					0	0	0			REV__ENSG00000111145|ENST00000228741|ELK3	REV__ENSG00000111145|ENST00000228741|ELK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8139526247978	2	529.813856	1057.61316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.432	1	47.807	47.307	48.307	1.3751								0	0	0	0.32506	1	19448	19448		16.149	0	1		+		27196	9317	13385	13442	31211	31211					0.0866570102307378
QLLPNLRAV	9	Unmodified	_QLLPNLRAV_					0	0	0		ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	ENSG00000166228|ENST00000299299|PCBD1	ENSG00000166228|ENST00000299299|PCBD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	512.3198730349541	2	512.319109	1022.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.932	1	51.323	50.823	51.823	1.3911								0	0	0	0.11571	1	20902	20902		32.305	0	1				27197	3889	13386	13443	31212	31212					0.11325728468170837
QLLRREREFKK	11	Unmodified	_QLLRREREFKK_					0	0	0			REV__NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	REV__NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.6352416872978	3	501.63532	1501.88413	2.4207	0.0012143	-0.62939	-0.00031573	1.7913	0.0008986	501.63469409452586	88.664	1.1161	88.664	87.999	89.115	0					86	35	3	0	0	0	1.0395	1	37009	37009		0.08335	0	1	1183600	+		27198	14582	13387	13444	31213	31213					0.15326268728199466
QLLRREREFKK	11	Unmodified	_QLLRREREFKK_					0	0	0			REV__NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	REV__NDUFB7|p.E101K|1|0.29|ENSG00000099795|chr19:14566246-14566246|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.6380798220634	3	501.63532	1501.88413	5.0378	0.0025272	-0.91285	-0.00045792	4.125	0.0020692	501.63473924978877	87.854	1.2899	88.941	88.174	89.464	1.0865					84	40	3	0	0	0	1.0362	2	37138	37085;37138		0.45452	0.08335	1	1110500	+		27199	14582	13387	13444	31214;31215	31215					0.15326268728199466
QLLSEITRV	9	Unmodified	_QLLSEITRV_					0	0	0		ENSG00000068878|ENST00000404125|PSME4;nc|ENSG00000068878|Q14997-2|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8147460818291	2	529.813856	1057.61316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.044	1	48.015	47.515	48.515	1.9703								0	0	0	0.2924	1	19289	19289		19.362	4.1135	1				27200	837	13388	13445	31216	31216					0.0866570102307378
QLLSHILEV	9	Unmodified	_QLLSHILEV_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1;DOCK1-NPS|1|fusion;ENST00000473861.1_1_10:128908515-128926040:+|nuORF	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3127319216728	2	526.310949	1050.60735	2.3029	0.001212	0.13029	6.8574E-05	2.4332	0.0012806	526.3110721331499	59.099	0.26638	60.519	60.381	60.648	1.4196					14	8	2	0	0	0	0.24063	1	24800	24800		28.487	0	1	1300800			27201	3272	13389	13446	31217	31217					0.08406602511445271
QLLSHILEV	9	Unmodified	_QLLSHILEV_					0	0	0		nc|ENSG00000150760|Q14185|DOCK1;ENSG00000150760|ENST00000623213|DOCK1;DOCK1-NPS|1|fusion;ENST00000473861.1_1_10:128908515-128926040:+|nuORF	nc|ENSG00000150760|Q14185|DOCK1	nc|ENSG00000150760|Q14185|DOCK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.310949	1050.60735	1.9833	0.0010438	-0.65584	-0.00034517	1.3275	0.00069865	526.310425673469	58.613	0.2619	60.582	60.401	60.663	1.969	0.031636	-0.00058266	NaN	28.487	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1168500			27202	3272	13389	13446							0.08406602511445271
QLLSHLHTL	9	Unmodified	_QLLSHLHTL_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0701476931572	3	354.541586	1060.60293	-0.51384	-0.00018218	1.8726	0.00066392	1.3588	0.00048175	354.54240659239974	30.981	0.28588	32.262	32.057	32.343	1.2813					13	8	2	0	0	0	0.11837	1	12976	12976		0.96228	0	1	378290			27203	1776	13390	13447	31218	31218					0.07505138088527019
QLLSVTIVW	9	Unmodified	_QLLSVTIVW_					0	0	0		ENST00000496406.1_1_2:160084338-160084836:+|nuORF	ENST00000496406.1_1_2:160084338-160084836:+|nuORF	ENST00000496406.1_1_2:160084338-160084836:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	530.2179443240166	2	529.815867	1057.61718	1.8756	0.00099374	-4.0115	-0.0021253	-2.1358	-0.0011316	529.8134513961292	47.973	0.17122	48.303	48.196	48.367	0.33034					9	5	2	0	0	0	0.11568	1	20094	20094		10.824	0	1	317810			27204	6952	13391	13448	31219	31219					0.09067790516814966
QLLTTRHLK	9	Unmodified	_QLLTTRHLK_					0	0	0			REV__nc|ENSG00000169064|A8MT70-3|ZBBX	REV__nc|ENSG00000169064|A8MT70-3|ZBBX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3430053591728	2	555.343115	1108.67168	3.1727	0.0017619	-1.5233	-0.00084595	1.6494	0.000916	555.3420607480682	107.51	0.13574	107.67	107.58	107.72	0.15795					19	6	4	0	0	0	0.80152	1	46205	46205		3.2813	0.78282	1	43184000	+		27205	10929	13392	13449	31220	31220					0.12168802388214317
QLLWFRRLYII	11	Unmodified	_QLLWFRRLYII_					0	0	0		ENST00000488375.2_2_17:16220949-16229209:+|nuORF;ENSG00000108474|ENST00000225609|PIGL	ENST00000488375.2_2_17:16220949-16229209:+|nuORF	ENST00000488375.2_2_17:16220949-16229209:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	760.8153564333916	2	760.958646	1519.90274	2.7312	0.0020783	-2.9883	-0.002274	-0.25713	-0.00019566	761.455249478996	100.16	0.16276	100.24	100.12	100.28	0.072716					5	4	2	0	0	0	0.14606	1	41895	41895		0.35063	0.35063	1	180610			27206	1635	13393	13450	31221	31221					0.16358430370087262
QLLWNKEIL	9	Unmodified	_QLLWNKEIL_					0	0	0			REV__nc|ENSG00000163808|Q9NS87-2|KIF15	REV__nc|ENSG00000163808|Q9NS87-2|KIF15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.3420287966728	2	578.839874	1155.66519	1.8819	0.0010893	-1.1288	-0.00065338	0.75316	0.00043596	579.3399226862506	61.633	0.40354	61.962	61.825	62.229	0.32974					18	12	2	0	0	0	0.68551	1	25831	25831		7.9102	1.7044	1	492580	+		27207	10699	13394	13451	31222	31222					0.09358864436853764
QLMLKVHK	8	Unmodified	_QLMLKVHK_					0	0	0		ENST00000537140.5_1_11:115040311-115375169:-|nuORF;nc|ENSG00000182985|Q9BY67-5|CADM1;nc|ENSG00000182985|Q9BY67|CADM1;nc|ENSG00000182985|Q9BY67-4|CADM1;ENSG00000182985|ENST00000331581|CADM1;nc|ENSG00000182985|Q9BY67-2|CADM1	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.8723632693291	3	332.872279	995.595007	-1.829	-0.00060883	2.2989	0.00076523	0.46984	0.0001564	332.8733695424742	40.97	0.57619	40.97	40.698	41.274	0					73	17	5	0	0	0	0.89008	1	17096	17096		1.6526	0	1	278180000			27208	4636	13395	13452	31223	31223					0.09703287567378993
QLMLKVHK	8	Unmodified	_QLMLKVHK_					0	0	0		ENST00000537140.5_1_11:115040311-115375169:-|nuORF;nc|ENSG00000182985|Q9BY67-5|CADM1;nc|ENSG00000182985|Q9BY67|CADM1;nc|ENSG00000182985|Q9BY67-4|CADM1;ENSG00000182985|ENST00000331581|CADM1;nc|ENSG00000182985|Q9BY67-2|CADM1	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	ENST00000537140.5_1_11:115040311-115375169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.8727599978447	3	332.872279	995.595007	1.1131	0.00037051	0.44437	0.00014792	1.5575	0.00051843	332.8726440450336	40.4	0.6273	40.713	40.381	41.008	0.31263					82	19	5	0	0	0	0.89008	2	16869	16869;16907		1.6526	0	1	226760000			27209	4636	13395	13452	31224;31225	31224					0.09703287567378993
QLMYALYNL	9	Unmodified	_QLMYALYNL_					0	0	0			REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7960693240166	2	564.791535	1127.56852	1.3685	0.00077292	3.1744	0.0017929	4.543	0.0025658	564.7946286908358	79.856	0.27959	81.572	81.383	81.663	1.7167					17	8	3	0	0	0	0.70108	1	33470	33470		7.2892	1.9923	1	668020	+		27210	12986	13396	13453	31226	31226					0.009835538853849357
QLMYALYNL	9	Unmodified	_QLMYALYNL_					0	0	0			REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	564.791535	1127.56852	2.6604	0.0015026	1.3515	0.00076331	4.0119	0.0022659	564.7926355702115	80.294	0.21871	81.545	81.45	81.669	1.2512	-0.013627	-0.00044145	NaN	7.2892	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678170	+		27211	12986	13396	13453							0.009835538853849357
QLMYALYNL	9	Unmodified	_QLMYALYNL_					0	0	0			REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	REV__ENST00000423411.2_1_6:135941072-135941228:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	564.791535	1127.56852	1.3685	0.00077292	3.1744	0.0017929	4.543	0.0025658	564.7946286908358	79.856	0.27959	81.572	81.383	81.663	1.7167	0.013627	0.0016177	NaN	7.2892	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	668020	+		27212	12986	13396	13453							0.009835538853849357
QLNELVALEMM	11	Unmodified	_QLNELVALEMM_					0	0	0			REV__tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	REV__tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8898193240166	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.251	1	90.271	89.771	90.771	1.0199								0	0	0	0.63775	1	37615	37615		0.094841	0	1		+		27213	14803	13397	13454	31227	31227					0.0027121603402520122
QLNELVALEMM	11	Unmodified	_QLNELVALEMM_					0	0	0			REV__tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	REV__tr|A0A553SHM8|A0A553SHM8_NIACIParB/RepB/Spo0JfamilypartitionproteinOS=NialliacirculansOX=1397GN=CEQ21_13245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8900939822197	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.13	1	90.535	90.035	91.035	1.4045								0	0	0	0.63775	1	37552	37552		0.094841	0	1		+		27214	14803	13397	13454	31228	31228					0.0027121603402520122
QLNGILLHL	9	Unmodified	_QLNGILLHL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.8144714236259	2	510.813659	1019.61277	1.9529	0.00099755	-0.6013	-0.00030715	1.3516	0.0006904	510.8129894325	66.515	0.44906	66.515	66.318	66.767	0					26	13	3	0	0	0	0.098957	2	27715	27669;27715		49.669	20.016	1	1391300			27215	1724	13398	13455	31229;31230	31230					0.10374326093915442
QLNGILLHL	9	Unmodified	_QLNGILLHL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.8151733279228	2	510.813659	1019.61277	2.0809	0.001063	0.35598	0.00018184	2.4369	0.0012448	510.8137107117671	65.992	0.31821	66.317	66.114	66.432	0.32449					21	9	3	0	0	0	0.070759	2	27589	27589;27636		59.795	27.678	1	1385700			27216	1724	13398	13455	31231;31232	31231					0.10374326093915442
QLNGILLHL	9	Unmodified	_QLNGILLHL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8154479861259	2	510.813659	1019.61277	3.4555	0.0017651	-0.80111	-0.00040922	2.6544	0.0013559	510.8134807901317	64.657	0.36899	66.064	65.894	66.263	1.4071					33	11	4	0	0	0	0.04206	2	27086	27086;27134		74.396	29.989	1	8115100			27217	1724	13398	13455	31233;31234	31233					0.10374326093915442
QLNGILLHL	9	Unmodified	_QLNGILLHL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF;ENST00000402024.2_1_6:116778703-116778877:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8151122927666	2	510.813659	1019.61277	2.9962	0.0015305	-0.49306	-0.00025186	2.5032	0.0012787	510.813649445547	64.101	0.40623	66.029	65.827	66.233	1.928					31	12	3	0	0	0	0.033521	2	26912	26866;26912		81.864	29.596	1	6218000			27218	1724	13398	13455	31235;31236	31236					0.10374326093915442
QLPILGIKH	9	Unmodified	_QLPILGIKH_					0	0	0		ENST00000465076.5_1_10:75531037-75531319:+|nuORF	ENST00000465076.5_1_10:75531037-75531319:+|nuORF	ENST00000465076.5_1_10:75531037-75531319:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8230773806572	2	509.824027	1017.6335	2.3439	0.001195	-3.2377	-0.0016507	-0.89383	-0.00045569	509.8221744854012	91.646	0.47856	91.646	91.436	91.915	0					35	14	3	0	0	0	0.85019	1	38355	38355		0.52476	0	1	2556300			27219	6696	13399	13456	31237	31237					0.12538916473556583
QLPNFAFSV	9	Unmodified	_QLPNFAFSV_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;TCF25|p.L412P|1|0.44|ENSG00000141002|chr16:89900648-89900648|T/C|missense_variant;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7689086794853	2	511.768917	1021.52328	3.1891	0.0016321	-3.7387	-0.0019134	-0.54961	-0.00028127	511.7658909537908	74.843	0.77615	76.625	76.42	77.196	1.7817					43	24	4	0	0	0	0.12174	1	31372	31372		42.095	9.7891	1	2961800			27220	2944	13400	13457	31238	31238					0.013380714145114325
QLPNFAFSV	9	Unmodified	_QLPNFAFSV_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;TCF25|p.L412P|1|0.44|ENSG00000141002|chr16:89900648-89900648|T/C|missense_variant;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.768917	1021.52328	2.0524	0.0010504	-0.53839	-0.00027553	1.514	0.00077484	511.76885053331574	76.798	0.31706	76.798	76.592	76.909	0	0.1308	0.00053936	NaN	42.095	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	481320			27221	2944	13400	13457							0.013380714145114325
QLPNFAFSV	9	Unmodified	_QLPNFAFSV_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;TCF25|p.L412P|1|0.44|ENSG00000141002|chr16:89900648-89900648|T/C|missense_variant;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.768917	1021.52328	2.3986	0.0012275	0.60376	0.00030899	3.0023	0.0015365	511.76929751121236	76.355	0.24643	76.677	76.511	76.758	0.32163	0.0094513	0.0017084	NaN	42.095	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	486330			27222	2944	13400	13457							0.013380714145114325
QLPNFAFSV	9	Unmodified	_QLPNFAFSV_					0	0	0		ENSG00000141002|ENST00000263346|TCF25;TCF25|p.L412P|1|0.44|ENSG00000141002|chr16:89900648-89900648|T/C|missense_variant;ENST00000563636.5_1_16:89961526-89967207:+|nuORF;ENST00000570116.6_1_16:89962405-89970614:+|nuORF	ENSG00000141002|ENST00000263346|TCF25	ENSG00000141002|ENST00000263346|TCF25	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	511.768917	1021.52328	3.0183	0.0015447	-1.4271	-0.00073032	1.5912	0.00081433	511.7673055038625	75.263	0.39365	76.569	76.374	76.768	1.3063	-0.097962	-0.00037022	NaN	42.095	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2299300			27223	2944	13400	13457							0.013380714145114325
QLPPRLFTL	9	Unmodified	_QLPPRLFTL_					0	0	0		ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.8325073122978	2	542.829309	1083.64407	2.8786	0.0015626	-0.59532	-0.00032316	2.2833	0.0012394	542.8297112810811	62.567	1.4444	63.98	63.52	64.965	1.4134					113	46	3	0	0	0	0.073578	4	26280	26280;26336;26386;26434		58.679	10.333	1	2584100			27224	2456	13401	13458	31239;31240;31241;31242	31239					0.10558899127977384
QLPPRLFTL	9	Unmodified	_QLPPRLFTL_					0	0	0		ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	ENSG00000130764|ENST00000378251|LRRC47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.8311645388603	2	542.829309	1083.64407	2.922	0.0015861	-0.40116	-0.00021776	2.5208	0.0013684	542.8295430168296	62.036	1.3291	63.993	63.497	64.826	1.9571					94	42	3	0	0	0	0.25667	1	25954	25954		27.629	0.74515	1	2366800			27225	2456	13401	13458	31243	31243					0.10558899127977384
QLPSPFFIFF	10	Unmodified	_QLPSPFFIFF_					0	0	0			REV__ENST00000527449.1_1_14:73574437-73577964:+|nuORF	REV__ENST00000527449.1_1_14:73574437-73577964:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8318969607353	2	621.831517	1241.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.991	1	85.629	85.129	86.129	1.6379								0	0	0	0.4383	1	35226	35226		27.629	2.9549	1		+		27226	13678	13402	13459	31244	31244					0.037323635508755615
QLPVVVFTF	9	Unmodified	_QLPVVVFTF_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;SKIV2L|p.K777Lfs*25|1|0.48|ENSG00000204351|chr6:31966833-31966834|-/ACTTCTGGGCTCAAGCAGTCTGTCTGCCTCAGCTT|frameshift_variant	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3080322146416	2	525.305136	1048.59572	4.244	0.0022294	0.85521	0.00044925	5.0992	0.0026787	525.3059347088772	93.73	0.54079	94.602	94.385	94.926	0.87176					27	16	3	0	0	0	0.24063	2	39437	39437;39490		28.487	11.545	1	1331600			27227	5135	13403	13460	31245;31246	31245					0.07336405488081255
QLPVVVFTF	9	Unmodified	_QLPVVVFTF_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;SKIV2L|p.K777Lfs*25|1|0.48|ENSG00000204351|chr6:31966833-31966834|-/ACTTCTGGGCTCAAGCAGTCTGTCTGCCTCAGCTT|frameshift_variant	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3077880740166	2	525.305136	1048.59572	3.2979	0.0017324	2.1284	0.001118	5.4263	0.0028505	525.3066961373258	93.288	0.56744	94.565	94.292	94.859	1.277					24	17	2	0	0	0	0.24063	2	39222	39222;39272		28.487	11.545	1	1398400			27228	5135	13403	13460	31247;31248	31247					0.07336405488081255
QLQDFDWQV	9	Unmodified	_QLQDFDWQV_					0	0	0		ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.7774536013603	2	589.77747	1177.54039	1.8657	0.0011004	-0.31941	-0.00018838	1.5463	0.00091198	589.7771196509842	67.429	0.40362	67.429	67.26	67.663	0					30	12	3	0	0	0	0.029093	2	28054	28054;28103		88.904	56.598	1	2589000			27229	4065	13404	13461	31249;31250	31249					-0.04128052770352042
QLQDFDWQV	9	Unmodified	_QLQDFDWQV_					0	0	0		ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.7759277224541	2	589.77747	1177.54039	1.7102	0.0010086	-1.8737	-0.0011051	-0.16348	-9.6417E-05	589.775752848928	67.054	0.4015	67.377	67.157	67.558	0.32269					33	13	3	0	0	0	0.0066739	3	28063	28016;28063;28112		115.69	63.424	1	4372000			27230	4065	13404	13461	31251;31252;31253	31252					-0.04128052770352042
QLQDFDWQV	9	Unmodified	_QLQDFDWQV_					0	0	0		ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.7786132693291	2	589.77747	1177.54039	2.1699	0.0012798	-0.94919	-0.00055981	1.2208	0.00071997	589.776804414615	65.956	0.45287	67.355	67.124	67.576	1.3989					44	14	4	0	0	0	0.0066739	3	27652	27608;27652;27703		115.69	63.424	1	18392000			27231	4065	13404	13461	31254;31255;31256	31255					-0.04128052770352042
QLQDFDWQV	9	Unmodified	_QLQDFDWQV_					0	0	0		ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	ENSG00000169019|ENST00000381571|COMMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.7784301638603	2	589.77747	1177.54039	1.7936	0.0010578	-0.53454	-0.00031526	1.2591	0.00074259	589.7770217648477	65.544	0.46105	67.452	67.187	67.649	1.9085					42	14	4	0	0	0	0.0066739	3	27439	27439;27481;27543		115.69	63.424	1	17694000			27232	4065	13404	13461	31257;31258;31259	31257					-0.04128052770352042
QLQEKERIL	9	Unmodified	_QLQEKERIL_					0	0	0			REV__ENSG00000015133|ENST00000389857|CCDC88C	REV__ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.3424560427666	2	578.837862	1155.66117	2.1101	0.0012214	-0.19887	-0.00011511	1.9112	0.0011063	579.3385278660957	62.247	0.46666	62.247	62.118	62.584	0					24	14	3	0	0	0	0.66839	1	25966	25966		8.5933	0	1	431040	+		27233	8545	13405	13462	31260	31260					0.08956774943135315
QLQEKERIL	9	Unmodified	_QLQEKERIL_					0	0	0			REV__ENSG00000015133|ENST00000389857|CCDC88C	REV__ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	578.837862	1155.66117	2.1101	0.0012214	-0.19887	-0.00011511	1.9112	0.0011063	579.3385278660957	62.247	0.46666	62.247	62.118	62.584	0	0.14215	-0.0013164	NaN	8.5933	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431040	+		27234	8545	13405	13462							0.08956774943135315
QLQEKERIL	9	Unmodified	_QLQEKERIL_					0	0	0			REV__ENSG00000015133|ENST00000389857|CCDC88C	REV__ENSG00000015133|ENST00000389857|CCDC88C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	578.837862	1155.66117	1.8819	0.0010893	2.3461	0.001358	4.228	0.0024473	579.3399226862506	61.633	0.40354	61.962	61.825	62.229	0.32974	-0.14215	0.0016298	NaN	8.5933	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	492580	+		27235	8545	13405	13462							0.08956774943135315
QLQKVHFI	8	Unmodified	_QLQKVHFI_					0	0	0		POLB-ASH2L|1|fusion;ENSG00000070501|ENST00000265421|POLB	POLB-ASH2L|1|fusion	POLB-ASH2L|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9824096560478	3	338.202793	1011.58655	0.13141	4.4443E-05	-1.3398	-0.00045311	-1.2084	-0.00040867	338.20193622822256	25.727	0.2481	27.444	27.304	27.552	1.7167					12	7	2	0	0	0	2.3239	1	10712	10712		1.8442	0	1	529650			27236	8060	13406	13463	31261	31261					0.08122056922411502
QLQVIGQPSN	10	Unmodified	_QLQVIGQPSN_					0	0	0			REV__ENST00000447882.1_1_1:16361675-16363149:-|nuORF	REV__ENST00000447882.1_1_1:16361675-16363149:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1083.084033191204	1	1083.5793	1082.57202	0.5924	0.00064192	3.3408	0.0036201	3.9332	0.004262	1083.5827849642674	57.729	0.13052	59.698	59.654	59.784	1.969					5	4	2	0	0	0	0.12461	1	24240	24240		10.074	1.3285	1	3208200	+		27237	11467	13407	13464	31262	31262					0.03403939983604687
QLREYQIL	8	Unmodified	_QLREYQIL_					0	0	0			REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8027831912041	2	531.800749	1061.58694	2.3485	0.0012489	0.94897	0.00050467	3.2974	0.0017536	531.8011713076204	41.309	0.50904	42.634	42.399	42.908	1.3254					47	15	4	0	0	0	0.38289	2	17311	17273;17311		57.471	11.45	1	13376000	+		27238	8072	13408	13465	31263;31264	31264					0.058614318515992636
QLREYQIL	8	Unmodified	_QLREYQIL_					0	0	0			REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8022949099541	2	531.800749	1061.58694	2.3101	0.0012285	0.62982	0.00033494	2.9399	0.0015635	531.8010580919614	40.866	0.47558	42.759	42.515	42.991	1.8927					41	14	4	0	0	0	0.34211	3	17090	17090;17128;17166		67.344	13.511	1	11524000	+		27239	8072	13408	13465	31265;31266;31267	31265					0.058614318515992636
QLRHRLWFDLW	11	Unmodified	_QLRHRLWFDLW_					0	0	0			REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1569.842456042767	1	1569.84373	1568.83645	2.0264	0.0031811	-1.6039	-0.0025179	0.42247	0.00066322	1569.840409195839	57.565	0.30621	57.565	57.479	57.785	0					12	9	2	0	0	0	1.0362	1	24038	24038		1.3295	0	1	1258100	+		27240	11974	13409	13466	31268	31268					0.0747861452800862
QLRHRLWFDLW	11	Unmodified	_QLRHRLWFDLW_					0	0	0			REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1569.84373	1568.83645	2.0264	0.0031811	-1.6039	-0.0025179	0.42247	0.00066322	1569.840409195839	57.565	0.30621	57.565	57.479	57.785	0	0.095011	-0.005714	NaN	1.3295	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1258100	+		27241	11974	13409	13466							0.0747861452800862
QLRHRLWFDLW	11	Unmodified	_QLRHRLWFDLW_					0	0	0			REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	REV__ENST00000580893.5_1_17:62486773-62489133:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1569.84373	1568.83645	-0.8395	-0.0013179	4.5274	0.0071074	3.6879	0.0057895	1570.8537755516516	55.407	0.048428	57.375	57.336	57.385	1.9684	-0.095011	0.0039113	NaN	1.3295	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8258300	+		27242	11974	13409	13466							0.0747861452800862
QLRLQILLRPL	11	Unmodified	_QLRLQILLRPL_					0	0	0			REV__ENST00000342992.10_3_2:179433745-179433817:-|nuORF	REV__ENST00000342992.10_3_2:179433745-179433817:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.4779846072197	4	341.479049	1361.88709	-1.9776	-0.0006753	-0.75146	-0.00025661	-2.729	-0.00093191	341.4787811110591	29.292	1.0151	29.292	28.993	30.008	0					102	32	5	0	0	0	1.039	1	12286	12286		0.45452	0	1	29706000	+		27243	12507	13410	13467	31269	31269					0.22062143853031557
QLRRAATAH	9	Unmodified	_QLRRAATAH_					0	0	0		APBB1|p.I367Sfs*9|1|0.05|ENSG00000166313|chr11:6403151-6403151|C/-|frameshift_variant;nc|ENSG00000166313|O00213-2|APBB1;ENSG00000166313|ENST00000609360|APBB1	APBB1|p.I367Sfs*9|1|0.05|ENSG00000166313|chr11:6403151-6403151|C/-|frameshift_variant	APBB1|p.I367Sfs*9|1|0.05|ENSG00000166313|chr11:6403151-6403151|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.2950927615166	2	512.293956	1022.57336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.298	1	52.298	51.798	52.798	0								0	0	0	0.42693	1	21812	21812		4.756	0	1				27244	68	13411	13468	31270	31270					0.06297618863015941
QLRSCNTS	8	Unmodified	_QLRSCNTS_					0	0	0			REV__ENSG00000119328|ENST00000322940|ABITRAM	REV__ENSG00000119328|ENST00000322940|ABITRAM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.7174865603447	2	454.716359	907.418164	1.7946	0.00081604	0.69104	0.00031423	2.4857	0.0011303	454.71641018677013	73.507	0.54807	73.507	73.216	73.764	0					48	17	3	0	0	0	0.88846	1	30569	30569		3.5965	0.60125	1	30552000	+		27245	9537	13412	13469	31271	31271					-0.039247930535452724
QLRVHVRRH	9	Unmodified	_QLRVHVRRH_					0	0	0		ENST00000498342.5_1_1:6648784-6649012:+|nuORF;ENST00000466941.1_1_1:6648784-6649269:+|nuORF;ENSG00000204859|ENST00000377674|ZBTB48	ENST00000498342.5_1_1:6648784-6649012:+|nuORF	ENST00000498342.5_1_1:6648784-6649012:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1421386599541	4	300.935074	1199.71119	-2.352	-0.0007078	0.3159	9.5066E-05	-2.0361	-0.00061274	300.9346854845453	71.598	0.28648	71.598	71.446	71.732	0					11	8	2	0	0	0	0.11955	1	29809	29809		0.23584	0	1	118520			27246	5163	13413	13470	31272	31272					0.11932367182294001
QLSEVFIQL	9	Unmodified	_QLSEVFIQL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;SMARCA4-DNM2|25|fusion;SMARCA4-DNM2|20|fusion;SMARCA4-DNM2|24|fusion;SMARCA4-DNM2|19|fusion;SMARCA4-DNM2|18|fusion;SMARCA4-DNM2|17|fusion;SMARCA4-DNM2|23|fusion;SMARCA4-DNM2|16|fusion;SMARCA4-DNM2|22|fusion;SMARCA4-DNM2|15|fusion;SMARCA4-DNM2|14|fusion;SMARCA4-DNM2|21|fusion;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000080503|P51531-2|SMARCA2;SMARCA4-DNM2|25|fusion	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8040038943291	2	538.802957	1075.59136	2.6467	0.001426	-0.56499	-0.00030442	2.0817	0.0011216	538.8033367082315	77.463	0.60369	78.744	78.346	78.95	1.2809					34	18	3	0	0	0	0.019432	2	32496	32496;32546		99.799	57.959	1	2242900			27247	1002;2342	13414	13471	31273;31274	31273					0.05658896274530889
QLSEVFIQL	9	Unmodified	_QLSEVFIQL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;SMARCA4-DNM2|25|fusion;SMARCA4-DNM2|20|fusion;SMARCA4-DNM2|24|fusion;SMARCA4-DNM2|19|fusion;SMARCA4-DNM2|18|fusion;SMARCA4-DNM2|17|fusion;SMARCA4-DNM2|23|fusion;SMARCA4-DNM2|16|fusion;SMARCA4-DNM2|22|fusion;SMARCA4-DNM2|15|fusion;SMARCA4-DNM2|14|fusion;SMARCA4-DNM2|21|fusion;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000080503|P51531-2|SMARCA2;SMARCA4-DNM2|25|fusion	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.8036376833916	2	538.802957	1075.59136	1.9367	0.0010435	0.42865	0.00023096	2.3653	0.0012745	538.8033222275022	76.985	0.3861	78.737	78.529	78.915	1.7514					25	11	3	0	0	0	0.033504	2	32248	32248;32295		81.89	47.788	1	2682300			27248	1002;2342	13414	13471	31275;31276	31275					0.05658896274530889
QLSEVFIQL	9	Unmodified	_QLSEVFIQL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;SMARCA4-DNM2|25|fusion;SMARCA4-DNM2|20|fusion;SMARCA4-DNM2|24|fusion;SMARCA4-DNM2|19|fusion;SMARCA4-DNM2|18|fusion;SMARCA4-DNM2|17|fusion;SMARCA4-DNM2|23|fusion;SMARCA4-DNM2|16|fusion;SMARCA4-DNM2|22|fusion;SMARCA4-DNM2|15|fusion;SMARCA4-DNM2|14|fusion;SMARCA4-DNM2|21|fusion;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000080503|P51531-2|SMARCA2;SMARCA4-DNM2|25|fusion	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	538.802957	1075.59136	1.6329	0.00087981	-1.6127	-0.00086894	0.020158	1.0861E-05	538.8020305481474	78.891	0.27074	78.891	78.724	78.995	0	0.12031	-0.0013196	NaN	99.799	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	885750			27249	1002;2342	13414	13471							0.05658896274530889
QLSEVFIQL	9	Unmodified	_QLSEVFIQL_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2;ENST00000585799.5_1_19:11132109-11172489:+|nuORF;ENST00000591595.5_1_19:11130023-11172489:+|nuORF;ENST00000592604.5_1_19:11123597-11172489:+|nuORF;SMARCA4-DNM2|25|fusion;SMARCA4-DNM2|20|fusion;SMARCA4-DNM2|24|fusion;SMARCA4-DNM2|19|fusion;SMARCA4-DNM2|18|fusion;SMARCA4-DNM2|17|fusion;SMARCA4-DNM2|23|fusion;SMARCA4-DNM2|16|fusion;SMARCA4-DNM2|22|fusion;SMARCA4-DNM2|15|fusion;SMARCA4-DNM2|14|fusion;SMARCA4-DNM2|21|fusion;ENSG00000127616|ENST00000344626|SMARCA4;nc|ENSG00000127616|P51532-4|SMARCA4;nc|ENSG00000127616|P51532-3|SMARCA4;nc|ENSG00000127616|P51532-2|SMARCA4;nc|ENSG00000127616|P51532-5|SMARCA4	nc|ENSG00000080503|P51531-2|SMARCA2;SMARCA4-DNM2|25|fusion	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	538.802957	1075.59136	1.7982	0.00096889	-0.45749	-0.00024649	1.3407	0.0007224	538.8026790790462	78.403	0.28537	78.712	78.579	78.864	0.30933	-0.058696	-7.4718E-05	NaN	99.799	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	636160			27250	1002;2342	13414	13471							0.05658896274530889
QLSFQDQKNN	10	Unmodified	_QLSFQDQKNN_					0	0	0		nc|ENSG00000108387|O43236-8|SEPTIN4;ENSG00000108387|ENST00000672673|SEPTIN4	nc|ENSG00000108387|O43236-8|SEPTIN4	nc|ENSG00000108387|O43236-8|SEPTIN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	407.8675109744072	3	407.866798	1220.57856	2.0168	0.00082257	-1.4499	-0.00059137	0.56687	0.00023121	407.866169990045	47.65	0.28316	49.033	48.89	49.173	1.3825					13	8	2	0	0	0	0.89588	1	19931	19931		1.9064	0.45126	1	786120			27251	1631	13415	13472	31277	31277					-0.022901668556414734
QLSLAVTEAF	10	Unmodified	_QLSLAVTEAF_					0	0	0			REV__tr|A0A553SPH5|A0A553SPH5_NIACIPyridoxalphosphate-dependentaminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_26410PE=4SV=1	REV__tr|A0A553SPH5|A0A553SPH5_NIACIPyridoxalphosphate-dependentaminotransferaseOS=NialliacirculansOX=1397GN=CEQ21_26410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7853881716728	2	539.792589	1077.57063	2.3479	0.0012674	-1.7576	-0.00094872	0.59035	0.00031867	539.7914655792814	63.01	0.8155	64.955	64.658	65.473	1.9444					104	25	6	0	0	0	0.70618	1	26547	26547		18.146	0	1	78248000	+		27252	15089	13416	13473	31278	31278					0.03494305894832905
QLSRELLPV	9	Unmodified	_QLSRELLPV_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1;nc|ENSG00000167210|Q8IVV2-3|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.8168823122978	2	527.816399	1053.61824	2.1394	0.0011292	0.43952	0.00023199	2.5789	0.0013612	527.8166049975786	49.757	0.25037	49.757	49.593	49.843	0					11	7	2	0	0	0	0.51189	1	20791	20791		14.838	0	1	470800			27253	3957	13417	13474	31279	31279					0.09358004885712035
QLSRELLPV	9	Unmodified	_QLSRELLPV_					0	0	0		nc|ENSG00000167210|Q8IVV2|LOXHD1;ENSG00000167210|ENST00000642948|LOXHD1;nc|ENSG00000167210|Q8IVV2-3|LOXHD1;ENST00000335730.6_1_18:44089558-44181581:-|nuORF	nc|ENSG00000167210|Q8IVV2|LOXHD1	nc|ENSG00000167210|Q8IVV2|LOXHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.8183471560478	2	527.816399	1053.61824	1.8862	0.00099557	1.7559	0.00092678	3.6421	0.0019224	527.8173878252408	49.172	0.20659	49.503	49.383	49.59	0.33019					11	6	2	0	0	0	0.32838	1	20626	20626		24.021	0	1	693370			27254	3957	13417	13474	31280	31280					0.09358004885712035
QLTDLEQLL	9	Unmodified	_QLTDLEQLL_					0	0	0			REV__nc|ENSG00000096872|Q96LB3-2|IFT74	REV__nc|ENSG00000096872|Q96LB3-2|IFT74	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.7988769412041	2	536.797872	1071.58119	1.7698	0.00095002	0.65723	0.0003528	2.427	0.0013028	536.7981571669925	52.142	0.30881	52.468	52.343	52.652	0.32554					29	9	4	0	0	0	0.48482	1	21907	21907		16.149	0	1	6759300	+		27255	8939	13418	13475	31281	31281					0.0482628854927043
QLTDLNVQL	9	Unmodified	_QLTDLNVQL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MSMS	GG20161007_CRH_Patient100_A02_01	1	522.2908813357353	2	522.290214	1042.56587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.625	1	61.625	61.125	62.125	0								0	0	0	0.16797	1	25694	25694		28.487	9.0478	1				27256	3088	13419	13476	31282	31282					0.04629421752088092
QLTDLNVQL	9	Unmodified	_QLTDLNVQL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2911254763603	2	522.290214	1042.56587	2.6596	0.0013891	1.8239	0.0009526	4.4834	0.0023417	522.290448928455	60.076	0.32778	61.495	61.328	61.656	1.4196					23	10	3	0	0	0	0.0092758	1	25187	25187		108	50.526	1	2576800			27257	3088	13419	13476	31283	31283					0.04629421752088092
QLTDLNVQL	9	Unmodified	_QLTDLNVQL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2915527224541	2	522.290214	1042.56587	2.788	0.0014562	0.70073	0.00036599	3.4888	0.0018221	522.2903363512264	59.609	0.32809	61.578	61.435	61.763	1.969					18	10	2	0	0	0	0.0092758	2	25008	25008;25056		108	50.526	1	2170400			27258	3088	13419	13476	31284;31285	31284					0.04629421752088092
QLTDLNVQL	9	Unmodified	_QLTDLNVQL_					0	0	0		nc|ENSG00000144674|Q13439-3|GOLGA4;nc|ENSG00000144674|Q13439-4|GOLGA4;ENSG00000144674|ENST00000361924|GOLGA4;nc|ENSG00000144674|Q13439-5|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	nc|ENSG00000144674|Q13439-3|GOLGA4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	522.290214	1042.56587	2.2566	0.0011786	0.84079	0.00043914	3.0974	0.0016177	522.2905477869037	61.17	0.2493	61.5	61.328	61.578	0.32974	-0.02465	-0.00025931	NaN	108	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	521920			27259	3088	13419	13476							0.04629421752088092
QLTSTFYLF	9	Unmodified	_QLTSTFYLF_					0	0	0			REV__nc|ENSG00000290611|Q6ZSU1|CYP2G1P	REV__nc|ENSG00000290611|Q6ZSU1|CYP2G1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2931396365166	2	560.289682	1118.56481	3.2632	0.0018283	4.0917	0.0022926	7.3549	0.0041209	560.2911571856397	60.88	0.31998	62.3	62.121	62.441	1.4196					25	9	4	0	0	0	0.39927	1	25565	25565		20.454	1.0146	1	3270800	+		27260	14571	13420	13477	31286	31286					0.010272073831856687
QLVAGKGT	8	Unmodified	_QLVAGKGT_					0	0	0			REV__ENST00000332065.9_1_17:74078001-74078805:-|nuORF	REV__ENST00000332065.9_1_17:74078001-74078805:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	773.5610839724541	1	773.451579	772.444303	2.7397	0.002119	-1.5754	-0.0012185	1.1643	0.00090053	773.4513252813485	107.94	0.13174	107.99	107.91	108.04	0.050644					15	6	4	0	0	0	2.3239	1	46308	46308		0.69038	0	1	57205000	+		27261	12449	13421	13478	31287	31287					0.04897844180220545
QLVDIIEKV	9	Unmodified	_QLVDIIEKV_					0	0	0		ENST00000593111.1_1_17:40986588-40991030:+|nuORF;ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-3|PSME3;nc|ENSG00000131467|P61289-2|PSME3	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.8186523318291	2	528.818607	1055.62266	2.1054	0.0011134	-1.3433	-0.00071034	0.76217	0.00040305	528.8177733522579	59.163	0.3489	59.163	58.974	59.322	0					28	10	3	0	0	0	0.087723	2	24657	24657;24708		53.404	16.898	1	2217900			27262	2493	13422	13479	31288;31289	31288					0.09707469308591499
QLVDIIEKV	9	Unmodified	_QLVDIIEKV_					0	0	0		ENST00000593111.1_1_17:40986588-40991030:+|nuORF;ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-3|PSME3;nc|ENSG00000131467|P61289-2|PSME3	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.8185302615166	2	528.818607	1055.62266	2.6271	0.0013893	-2.0277	-0.0010723	0.59937	0.00031696	528.8174602300187	58.668	0.34066	58.994	58.778	59.119	0.32554					24	11	3	0	0	0	0.042285	2	24595	24550;24595		74.2	20.367	1	3238000			27263	2493	13422	13479	31290;31291	31291					0.09707469308591499
QLVDIIEKV	9	Unmodified	_QLVDIIEKV_					0	0	0		ENST00000593111.1_1_17:40986588-40991030:+|nuORF;ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-3|PSME3;nc|ENSG00000131467|P61289-2|PSME3	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.8194457888603	2	528.818607	1055.62266	0.40001	0.00021153	-0.19826	-0.00010484	0.20176	0.00010669	528.8190609359157	57.506	0.30094	58.92	58.718	59.019	1.4145					30	14	3	0	0	0	2.4408E-05	2	24098	24057;24098		168.54	61.597	1	13221000			27264	2493	13422	13479	31292;31293	31293					0.09707469308591499
QLVDIIEKV	9	Unmodified	_QLVDIIEKV_					0	0	0		ENST00000593111.1_1_17:40986588-40991030:+|nuORF;ENSG00000131467|ENST00000590720|PSME3;nc|ENSG00000131467|P61289-3|PSME3;nc|ENSG00000131467|P61289-2|PSME3	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	ENST00000593111.1_1_17:40986588-40991030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.8188354372978	2	528.818607	1055.62266	0.87721	0.00046389	-0.73005	-0.00038606	0.14717	7.7824E-05	528.8185235189624	56.892	0.35612	58.86	58.662	59.018	1.9684					27	11	3	0	0	0	0.0013614	2	23891	23844;23891		132.38	45.838	1	12264000			27265	2493	13422	13479	31294;31295	31295					0.09707469308591499
QLVDLKLTV	9	Unmodified	_QLVDLKLTV_					0	0	0		nc|ENSG00000084764|Q9UPY8-2|MAPRE3;ENSG00000084764|ENST00000233121|MAPRE3	nc|ENSG00000084764|Q9UPY8-2|MAPRE3	nc|ENSG00000084764|Q9UPY8-2|MAPRE3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.7754394412041	2	514.82115	1027.62775	2.5424	0.0013089	-2.8519	-0.0014682	-0.30952	-0.00015935	514.8185176181986	59.409	0.18418	59.735	59.624	59.808	0.32554					7	5	2	0	0	0	0.089748	1	24913	24913		29.082	7.3349	1	1089000			27266	1056	13423	13480	31296	31296					0.11503773171193643
QLVPVNSQLL	10	Unmodified	_QLVPVNSQLL_					0	0	0			REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8298217654228	2	555.829506	1109.64446	0.93388	0.00051908	-0.13953	-7.7556E-05	0.79435	0.00044152	555.829459381681	57.237	0.53481	58.652	58.369	58.904	1.4145					61	18	4	0	0	0	0.092962	1	24062	24062		65.235	1.2745	1	71222000	+		27267	9285	13424	13481	31297	31297					0.09402274057174509
QLVPVNSQLL	10	Unmodified	_QLVPVNSQLL_					0	0	0			REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	REV__FNBP4|p.E749Gfs*13|1|0.12|ENSG00000109920|chr11:47724541-47724541|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8303710818291	2	555.829506	1109.64446	0.81633	0.00045374	0.57463	0.0003194	1.391	0.00077314	555.8298658252235	56.636	0.4804	58.604	58.364	58.845	1.9684					56	15	5	0	0	0	0.092962	1	23803	23803		65.235	1.2745	1	66473000	+		27268	9285	13424	13481	31298	31298					0.09402274057174509
QLVQLLLVFH	10	Unmodified	_QLVQLLLVFH_					0	0	0			REV__ENSG00000109805|ENST00000251496|NCAPG	REV__ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1895324587822	4	303.189309	1208.72813	0.0032641	9.8965E-07	0.64417	0.0001953	0.64743	0.00019629	303.18933749033283	26.642	0.64719	28.388	28.218	28.865	1.747					58	21	4	0	0	0	0.89803	2	11125	11125;11232		0.77653	0.14971	1	3150300	+		27269	9282	13425	13482	31299;31300	31299					0.13211430224896503
QLVSGKRAY	9	Unmodified	_QLVSGKRAY_					0	0	0			REV__ENSG00000121931|ENST00000369763|LRIF1	REV__ENSG00000121931|ENST00000369763|LRIF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1968871951103	3	341.197819	1020.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.02	1	100.09	99.593	100.59	0.072716								0	0	0	0.42693	1	41880	41880		1.1933	0.12188	1		+		27270	9599	13426	13483	31301	31301					0.06216565054410239
QLVSGKRAY	9	Unmodified	_QLVSGKRAY_					0	0	0			REV__ENSG00000121931|ENST00000369763|LRIF1	REV__ENSG00000121931|ENST00000369763|LRIF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1977416872978	3	341.197819	1020.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.26	1	100.33	99.83	100.83	0.072716								0	0	0	0.42693	1	41974	41974		1.1933	0.12188	1		+		27271	9599	13426	13483	31302	31302					0.06216565054410239
QLWKELVL	8	Unmodified	_QLWKELVL_					0	0	0		ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8103515505791	2	514.810585	1027.60662	2.0623	0.0010617	-3.2634	-0.00168	-1.2011	-0.00061834	514.8088526304844	41.759	0.25844	43.652	43.508	43.767	1.8927					19	7	3	0	0	0	0.45419	1	17512	17512		50.855	4.8341	1	986990			27272	5467	13427	13484	31303	31303					0.09391807862357382
QLYEFDIKV	9	Unmodified	_QLYEFDIKV_					0	0	0		nc|ENSG00000135677|P15586-2|GNS;ENSG00000135677|ENST00000258145|GNS	nc|ENSG00000135677|P15586-2|GNS	nc|ENSG00000135677|P15586-2|GNS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.8085204958916	2	577.808239	1153.60193	2.1012	0.0012141	1.3126	0.00075845	3.4138	0.0019726	577.8087418908129	61.377	0.3482	61.377	61.203	61.552	0					19	10	3	0	0	0	0.21592	1	25586	25586		31.268	10.815	1	1093900			27273	2680	13428	13485	31304	31304					0.03126878928947008
QLYEFDIKV	9	Unmodified	_QLYEFDIKV_					0	0	0		nc|ENSG00000135677|P15586-2|GNS;ENSG00000135677|ENST00000258145|GNS	nc|ENSG00000135677|P15586-2|GNS	nc|ENSG00000135677|P15586-2|GNS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.8104125857353	2	577.808239	1153.60193	2.0373	0.0011772	1.9753	0.0011414	4.0127	0.0023186	577.8096604953768	60.781	0.34666	61.109	60.949	61.296	0.32809					20	10	3	0	0	0	0.25667	2	25455	25455;25506		27.629	10.617	1	1103000			27274	2680	13428	13485	31305;31306	31305					0.03126878928947008
QLYEFDIKV	9	Unmodified	_QLYEFDIKV_					0	0	0		nc|ENSG00000135677|P15586-2|GNS;ENSG00000135677|ENST00000258145|GNS	nc|ENSG00000135677|P15586-2|GNS	nc|ENSG00000135677|P15586-2|GNS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8112670779228	2	577.808239	1153.60193	2.3818	0.0013762	1.565	0.00090427	3.9468	0.0022805	577.8094991442708	59.6	0.52819	61.02	60.678	61.206	1.4196					31	16	3	0	0	0	0.1109	1	24967	24967		45.7	23.953	1	2590100			27275	2680	13428	13485	31307	31307					0.03126878928947008
QLYEFDIKV	9	Unmodified	_QLYEFDIKV_					0	0	0		nc|ENSG00000135677|P15586-2|GNS;ENSG00000135677|ENST00000258145|GNS	nc|ENSG00000135677|P15586-2|GNS	nc|ENSG00000135677|P15586-2|GNS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8105346560478	2	577.808239	1153.60193	2.5289	0.0014612	1.5155	0.00087569	4.0445	0.0023369	577.8091288426145	59.109	0.31672	61.079	60.908	61.225	1.969					21	9	3	0	0	0	0.039278	1	24798	24798		76.825	26.892	1	2653900			27276	2680	13428	13485	31308	31308					0.03126878928947008
QLYPIQRWFP	10	Unmodified	_QLYPIQRWFP_					0	0	0			REV__SERPINC1|p.K171Nfs*17|1|0.04|ENSG00000117601|chr1:173911909-173911910|AC/-|frameshift_variant	REV__SERPINC1|p.K171Nfs*17|1|0.04|ENSG00000117601|chr1:173911909-173911910|AC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.9113342165947	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9905	1	7.9905	7.4905	8.4905	0								0	0	0	0.66254	1	3285	3285		0.15932	0	1		+		27277	14617	13429	13486	31309	31309					0.054053580767231324
QLYRYDKPV	9	Unmodified	_QLYRYDKPV_					0	0	0		nc|ENSG00000006459|Q6ZMT4-2|KDM7A;ENSG00000006459|ENST00000397560|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	590.8239623904228	2	591.319306	1180.62406	2.2028	0.0013026	4.3406	0.0025667	6.5434	0.0038693	591.3208806430483	76.064	0.18117	76.386	76.272	76.453	0.32163					8	5	2	0	0	0	0.1006	1	31803	31803		21.747	2.4897	1	896160			27278	508	13430	13487	31310	31310					0.040971033973846716
QLYYYKHYL	9	Unmodified	_QLYYYKHYL_					0	0	0		ENST00000490134.1_1_9:108337313-108359001:+|nuORF;nc|ENSG00000106692|O75072-2|FKTN;ENSG00000106692|ENST00000357998|FKTN	ENST00000490134.1_1_9:108337313-108359001:+|nuORF	ENST00000490134.1_1_9:108337313-108359001:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8898498415947	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.276	1	91.642	91.142	92.142	1.366								0	0	0	0.42693	1	38027	38027		0.26902	0	1				27279	1583	13431	13488	31311	31311					0.011222740571838585
QMAWMSSVFH	10	Unmodified	_QMAWMSSVFH_					0	0	0		chr11:2919407-2922436|221|15.01|0.86|4.12|+|0|SLC22A18,SLC22A18|1	chr11:2919407-2922436|221|15.01|0.86|4.12|+|0|SLC22A18,SLC22A18|1	chr11:2919407-2922436|221|15.01|0.86|4.12|+|0|SLC22A18,SLC22A18|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5159789919853	3	408.516055	1222.52633	1.6493	0.00067376	-0.82779	-0.00033817	0.82148	0.00033559	408.5156245554509	71.669	1.4752	73.011	72.541	74.016	1.3415					194	47	5	0	0	0	0.88022	1	30063	30063		1.7423	0.52744	1	5700200			27280	186	13432	13489	31312	31312					-0.07602744794621685
QMDFVSFIH	9	Unmodified	_QMDFVSFIH_					0	0	0		nc|ENSG00000214711|A8MX76-2|CAPN14;ENSG00000214711|ENST00000403897|CAPN14	nc|ENSG00000214711|A8MX76-2|CAPN14	nc|ENSG00000214711|A8MX76-2|CAPN14	MSMS	GG20161007_CRH_Patient100_A02_02	2	375.1795837283134	3	375.179548	1122.51682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.95	1	60.278	59.778	60.778	0.32809								0	0	0	0.42693	1	25122	25122		1.1933	0.12188	1				27281	5245	13433	13490	31313	31313					-0.03954189808496267
QMISRIEYI	9	Unmodified	_QMISRIEYI_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENSG00000213923|ENST00000396832|CSNK1E	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8108398318291	2	576.807716	1151.60088	2.3211	0.0013388	2.0144	0.0011619	4.3354	0.0025007	576.80859518763	44.346	0.25839	45.711	45.545	45.804	1.3653					15	7	3	0	0	0	0.1109	1	18592	18592		45.7	15.063	1	790020			27282	2967	13434	13491	31314	31314					0.031143412884148347
QMISRIEYI	9	Unmodified	_QMISRIEYI_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENSG00000213923|ENST00000396832|CSNK1E	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8099243044853	2	576.807716	1151.60088	2.139	0.0012338	-0.27691	-0.00015972	1.862	0.001074	576.8082438850051	43.715	0.25082	45.659	45.516	45.767	1.9438					17	7	3	0	0	0	0.32838	1	18310	18310		24.021	3.5669	1	1122400			27283	2967	13434	13491	31315	31315					0.031143412884148347
QMISRIEYV	9	Unmodified	_QMISRIEYV_					0	0	0		CSNK1A1-PDE6A|1|fusion;nc|ENSG00000113712|P48729-3|CSNK1A1;ENSG00000113712|ENST00000377843|CSNK1A1;nc|ENSG00000113712|P48729-2|CSNK1A1;CSNK1A1L|p.M241Ifs*10|1|0.05|ENSG00000180138|chr13:37104534-37104535|-/TAATATATCCCTT|frameshift_variant;ENSG00000180138|ENST00000379800|CSNK1A1L	CSNK1A1-PDE6A|1|fusion	CSNK1A1-PDE6A|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	569.7983276247978	2	569.799891	1137.58523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.002	1	39.286	38.786	39.786	1.284								0	0	0	0.34787	1	15949	15949		13.906	4.5229	1				27284	380	13435	13492	31316	31316					0.021940547713484193
QMLDVAIRV	9	Unmodified	_QMLDVAIRV_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.2739745974541	2	522.797152	1043.57975	0.79754	0.00041695	2.5606	0.0013387	3.3582	0.0017556	522.7976499234522	53.179	0.16012	54.579	54.473	54.633	1.4005					6	4	2	0	0	0	0.10786	1	22231	22231		19.362	9.288	1	1089800			27285	779	13436	13493	31317	31317					0.059703759795411315
QMLELITRL	9	Unmodified	_QMLELITRL_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MSMS	GG20161007_CRH_Patient100_A02_01	1	558.8275634646416	2	558.825909	1115.63727	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.559	1	69.559	69.059	70.059	0								0	0	0	0.41705	1	28967	28967		7.1017	2.9122	1				27286	1297	13437	13494	31318	31318					0.08407218185107013
QMLELITRL	9	Unmodified	_QMLELITRL_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MSMS	GG20161007_CRH_Patient100_A02_02	2	558.8279907107353	2	558.825909	1115.63727	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.939	1	69.261	68.761	69.761	0.32224								0	0	0	0.34279	1	28857	28857		14.405	5.66	1				27287	1297	13437	13494	31319	31319					0.08407218185107013
QMLELITRL	9	Unmodified	_QMLELITRL_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	559.2822143435478	2	558.825909	1115.63727	1.1707	0.00065424	-0.90347	-0.00050488	0.26726	0.00014935	558.8257293953	67.145	0.31051	69.034	68.828	69.139	1.8889					15	9	2	0	0	0	0.090704	1	28138	28138		23.79	15.197	1	1743800			27288	1297	13437	13494	31320	31320					0.08407218185107013
QMLELITRL	9	Unmodified	_QMLELITRL_					0	0	0		ENSG00000100697|ENST00000343455|DICER1;nc|ENSG00000100697|Q9UPY3-2|DICER1	ENSG00000100697|ENST00000343455|DICER1	ENSG00000100697|ENST00000343455|DICER1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	558.825909	1115.63727	1.954	0.0010919	-0.47539	-0.00026566	1.4786	0.00082626	558.8255433648563	67.664	0.32831	69.042	68.914	69.242	1.3778	0.0039499	0.00013617	NaN	23.79	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1397500			27289	1297	13437	13494							0.08407218185107013
QMLERFLF	8	Unmodified	_QMLERFLF_					0	0	0		tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.7540161013603	2	542.28642	1082.55829	3.1297	0.0016972	1.9531	0.0010591	5.0828	0.0027563	542.2874535633907	61.094	0.24943	62.513	62.377	62.626	1.4196					14	7	2	0	0	0	2.3239	1	25582	25582		12.532	0	1	1091600			27290	16504	13438	13495	31321	31321					0.020309909508114288
QNCVRNSYDV	10	Unmodified	_QNCVRNSYDV_					0	0	0		ENST00000525872.1_1_11:75623027-75627198:+|nuORF;UVRAG-TMEM194A|1|fusion;ENSG00000198382|ENST00000356136|UVRAG	ENST00000525872.1_1_11:75623027-75627198:+|nuORF	ENST00000525872.1_1_11:75623027-75627198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2704345583916	2	599.269487	1196.52442	0.094565	5.667E-05	-1.0526	-0.00063079	-0.95804	-0.00057412	599.2687731050972	10.054	0.53547	10.799	10.478	11.014	0.74462					26	16	2	0	0	0	0.86043	1	4120	4120		5.7319	1.4026	1	724440			27291	5051	13439	13496	31322	31322					-0.06598082278878792
QNCVRNSYDV	10	Unmodified	_QNCVRNSYDV_					0	0	0		ENST00000525872.1_1_11:75623027-75627198:+|nuORF;UVRAG-TMEM194A|1|fusion;ENSG00000198382|ENST00000356136|UVRAG	ENST00000525872.1_1_11:75623027-75627198:+|nuORF	ENST00000525872.1_1_11:75623027-75627198:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2688476443291	2	599.269487	1196.52442	0.10176	6.0982E-05	0.26639	0.00015964	0.36816	0.00022062	599.2696896795338	11.003	0.35803	11.764	11.615	11.973	0.76165					16	11	2	0	0	0	0.86043	1	4621	4621		5.7319	2.1354	1	367210			27292	5051	13439	13496	31323	31323					-0.06598082278878792
QNELIRIRRR	10	Unmodified	_QNELIRIRRR_					0	0	0			REV__nc|ENSG00000105479|Q96M63-5|ODAD1	REV__nc|ENSG00000105479|Q96M63-5|ODAD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2075683474541	4	339.210101	1352.8113	-1.462	-0.00049592	-1.2323	-0.00041802	-2.6943	-0.00091393	339.20913329542435	44.201	1.2612	44.201	43.333	44.594	0					102	39	4	0	0	0	0.89803	1	18364	18364		0.15932	0	1	1727100	+		27293	9175	13440	13497	31324	31324					0.149005597254245
QNFGAYLL	8	Unmodified	_QNFGAYLL_					0	0	0			REV__ENST00000574828.1_1_17:80584850-80606216:-|nuORF	REV__ENST00000574828.1_1_17:80584850-80606216:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	925.4756347537041	1	925.477794	924.470518	2.605	0.0024109	-1.9975	-0.0018486	0.60751	0.00056223	925.4761629980823	60.073	0.32969	61.493	61.267	61.597	1.4196					18	10	2	0	0	0	0.54738	1	25163	25163		44.407	3.9584	1	1407200	+		27294	10160	13441	13498	31325	31325					0.005261133517251437
QNFHRPVKV	9	Unmodified	_QNFHRPVKV_					0	0	0		nc|ENSG00000118482|Q92576-2|PHF3;ENSG00000118482|ENST00000262043|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	nc|ENSG00000118482|Q92576-2|PHF3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	376.1969787478447	3	375.548964	1123.62506	1.612	0.00060538	2.2673	0.0008515	3.8793	0.0014569	375.5498568036239	48.399	0.26469	48.729	48.556	48.821	0.33034					15	8	2	0	0	0	0.11898	1	20237	20237		0.26902	0	1	1128200			27295	2035	13442	13499	31326	31326					0.06819362556939268
QNFRKWSSNYR	11	Unmodified	_QNFRKWSSNYR_					0	0	0		tr|A0A553ST15|A0A553ST15_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04070PE=4SV=1	tr|A0A553ST15|A0A553ST15_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04070PE=4SV=1	tr|A0A553ST15|A0A553ST15_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_04070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9180480837822	3	495.916375	1484.72729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.853	1	41.17	40.67	41.67	0.31683								0	0	0	0.63775	1	17170	17170		1.1098	0.65524	1				27296	16632	13443	13500	31327	31327					0.004319838378933127
QNGQRGWAIH	10	Unmodified	_QNGQRGWAIH_					0	0	0			REV__MITF|p.P161_N162insLYHHIAWGRQG|1|0.11|ENSG00000187098|chr3:69937949-69937950|-/TCTGTATCATCACATTGCCTGGGGTCGCCAAGG|inframe_insertion	REV__MITF|p.P161_N162insLYHHIAWGRQG|1|0.11|ENSG00000187098|chr3:69937949-69937950|-/TCTGTATCATCACATTGCCTGGGGTCGCCAAGG|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.7979003787041	2	583.794321	1165.57409	1.8361	0.0010719	1.7745	0.001036	3.6106	0.0021079	583.795774480421	78.048	0.31596	78.048	77.841	78.157	0					14	9	2	0	0	0	0.89803	1	32527	32527		1.6526	0.17072	1	852930	+		27297	14365	13444	13501	31328	31328					-0.0020758648793162138
QNHKFLLL	8	Unmodified	_QNHKFLLL_					0	0	0		ENST00000477796.1_1_X:106788951-106797806:+|nuORF;FRMPD3|p.P1368Afs*32|1|0.3|ENSG00000147234|chrX:107602041-107602062|GCCAGAGGCTGGCCCAGGCGTG/-|frameshift_variant;ENSG00000147234|ENST00000683843|FRMPD3	ENST00000477796.1_1_X:106788951-106797806:+|nuORF	ENST00000477796.1_1_X:106788951-106797806:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.0810119509697	3	338.202793	1011.58655	0.60673	0.0002052	0.29651	0.00010028	0.90323	0.00030548	338.20273487304166	29.875	0.32853	30.161	29.993	30.322	0.2859					15	10	2	0	0	0	2.3239	1	12468	12468		0	0	1	800740			27298	3177	13445	13502	31329	31329					0.0812205692243424
QNIRLKRRR	9	Unmodified	_QNIRLKRRR_					0	0	0			REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1342956423759	4	310.702178	1238.7796	0.36547	0.00011355	-1.0968	-0.00034078	-0.73133	-0.00022723	310.70182118867945	28.86	1.3376	29.14	28.466	29.803	0.2793					77	43	3	0	0	0	0.11954	1	11852	11852		0	0	1	613740	+		27299	12202	13446	13503	31330	31330					0.1697661176215206
QNIRLKRRR	9	Unmodified	_QNIRLKRRR_					0	0	0			REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.2196227908134	4	310.702178	1238.7796	0.49326	0.00015326	-0.55729	-0.00017315	-0.06403	-1.9894E-05	310.7019356551649	31.12	1.2271	31.411	30.769	31.996	0.29086					68	40	2	0	0	0	0.11954	1	12929	12929		0	0	1	1615500	+		27300	12202	13446	13503	31331	31331					0.1697661176215206
QNIRLKRRR	9	Unmodified	_QNIRLKRRR_					0	0	0			REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.2193481326103	4	310.702178	1238.7796	-0.39877	-0.0001239	-0.27749	-8.6217E-05	-0.67626	-0.00021011	310.7021052586952	29.822	1.1328	31.105	30.524	31.657	1.2825					67	36	2	0	0	0	0.11954	1	12416	12416		0	0	1	1879300	+		27301	12202	13446	13503	31332	31332					0.1697661176215206
QNIRLKRRR	9	Unmodified	_QNIRLKRRR_					0	0	0			REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1341125369072	4	310.702178	1238.7796	-0.14747	-4.5819E-05	-1.1161	-0.00034676	-1.2635	-0.00039258	310.70188767943984	27.178	0.85587	28.45	28.321	29.176	1.2715					60	27	3	0	0	0	0.11954	1	11403	11403		0	0	1	1585200	+		27302	12202	13446	13503	31333	31333					0.1697661176215206
QNIRLKRRR	9	Unmodified	_QNIRLKRRR_					0	0	0			REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	REV__ENST00000263073.10_1_17:2203445-2203508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1341125369072	4	310.702178	1238.7796	0.011204	3.481E-06	-1.399	-0.00043466	-1.3878	-0.00043118	310.70164108914895	26.786	1.0179	28.533	28.249	29.266	1.747					74	33	3	0	0	0	0.11954	1	11162	11162		0.26902	0.26902	1	1753900	+		27303	12202	13446	13503	31334	31334					0.1697661176215206
QNLQFKKP	8	Unmodified	_QNLQFKKP_					0	0	0			REV__SENP5|p.N620Rfs*8|1|0.09|ENSG00000119231|chr3:196903584-196903585|-/G|frameshift_variant	REV__SENP5|p.N620Rfs*8|1|0.09|ENSG00000119231|chr3:196903584-196903585|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	335.1105529665947	3	334.862548	1001.56581	0.21895	7.332E-05	0.31372	0.00010505	0.53268	0.00017837	334.8630231323541	48.391	0.79993	49.779	49.618	50.418	1.388					34	25	3	0	0	0	2.3239	1	20464	20464		0.40072	0	1	1402900	+		27304	9534	13447	13504	31335	31335					0.06509466542752307
QNQPLQEE	8	Unmodified	_QNQPLQEE_					0	0	0		nc|ENSG00000137727|Q9P2F6-4|ARHGAP20;nc|ENSG00000137727|Q9P2F6-2|ARHGAP20;nc|ENSG00000137727|Q9P2F6-3|ARHGAP20;ENSG00000137727|ENST00000683387|ARHGAP20;ARHGAP20|p.W1023Gfs*8|1|0.06|ENSG00000137727|chr11:110579879-110579879|A/-|frameshift_variant	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	nc|ENSG00000137727|Q9P2F6-4|ARHGAP20	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1580688357353	3	329.157689	984.451239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.832	1	40.128	39.628	40.628	1.2961								0	0	0	1.0178	1	16293	16293		0.45834	0	1				27305	2785	13448	13505	31336	31336					-0.04160887729847218
QNQQHQQVH	9	Unmodified	_QNQQHQQVH_					0	0	0			REV__ENSG00000104081|ENST00000354670|BMF	REV__ENSG00000104081|ENST00000354670|BMF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	382.2431518435478	3	382.851482	1145.53262	0.98452	0.00037692	-3.4648	-0.0013265	-2.4803	-0.00094959	382.8500434525728	46.029	0.21218	47.999	47.852	48.064	1.9703					10	6	2	0	0	0	0.11909	1	19222	19222		0.96228	0	1	806280	+		27306	9124	13449	13506	31337	31337					-0.03432767247227275
QNRKRRGQ	8	Unmodified	_QNRKRRGQ_					0	0	0			REV__ENST00000520481.1_1_8:28304597-28321161:-|nuORF	REV__ENST00000520481.1_1_8:28304597-28321161:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2046081423759	3	348.204079	1041.59041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.376	1	51.701	51.201	52.201	0.32553								0	0	0	1.0178	1	21522	21522		0.45834	0	1		+		27307	11848	13450	13507	31338	31338					0.0712753946884277
QNRRRLRQV	9	Unmodified	_QNRRRLRQV_					0	0	0			REV__ENSG00000100211|ENST00000216029|CBY1	REV__ENSG00000100211|ENST00000216029|CBY1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	307.1154052615166	4	307.189169	1224.72757	-0.66248	-0.00020351	3.2881	0.0010101	2.6257	0.00080658	307.19034168667713	32.476	0.23797	33.754	33.557	33.795	1.2782					10	7	2	0	0	0	0.11938	1	13598	13598		0	0	1	804640	+		27308	8974	13451	13508	31339	31339					0.12419448348396145
QNRRRLRQV	9	Unmodified	_QNRRRLRQV_					0	0	0			REV__ENSG00000100211|ENST00000216029|CBY1	REV__ENSG00000100211|ENST00000216029|CBY1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	307.189169	1224.72757	-2.5813	-0.00079295	3.5231	0.0010823	0.9418	0.00028931	307.1908294695209	33.735	0.33847	33.735	33.546	33.884	0	0.08632	0.0013983	NaN	0	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	720200	+		27309	8974	13451	13508							0.12419448348396145
QNSFADYG	8	Unmodified	_QNSFADYG_					0	0	0		nc|ENSG00000154359|Q17RB8-2|LONRF1;ENSG00000154359|ENST00000398246|LONRF1	nc|ENSG00000154359|Q17RB8-2|LONRF1	nc|ENSG00000154359|Q17RB8-2|LONRF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1271850466728	3	301.12773	900.361361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.414	1	34.688	34.188	35.188	1.2746								0	0	0	1.0178	1	14015	14015		0.45834	0	1				27310	3386	13452	13509	31340	31340					-0.09280517338424943
QNVEYIGY	8	Unmodified	_QNVEYIGY_					0	0	0		tr|A0A7D6ZVX2|A0A7D6ZVX2_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15485PE=3SV=1	tr|A0A7D6ZVX2|A0A7D6ZVX2_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15485PE=3SV=1	tr|A0A7D6ZVX2|A0A7D6ZVX2_9CLOTExtracellularsolute-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15485PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1580993533134	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.138	1	41.138	40.638	41.638	0								0	0	0	1.0178	1	17229	17229		0.45834	0	1				27311	17159	13453	13510	31341	31341					-0.03758798236151506
QNVIYFIKKL	10	Unmodified	_QNVIYFIKKL_					0	0	0			REV__ENSG00000187151|ENST00000334289|ANGPTL5	REV__ENSG00000187151|ENST00000334289|ANGPTL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1969177126884	4	317.195862	1264.75434	1.0711	0.00033975	1.6017	0.00050806	2.6728	0.00084782	317.1961583985246	40.829	1.8044	42.154	41.038	42.843	1.3254					142	57	4	0	0	0	0.89588	1	17046	17046		1.9064	0.1641	1	3140200	+		27312	11529	13454	13511	31342	31342					0.13255699396381715
QNWQQAYQQY	10	Unmodified	_QNWQQAYQQY_					0	0	0			REV__nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1	REV__nc|ENSG00000105323|Q9BUJ2-5|HNRNPUL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	452.8704101443291	3	452.870431	1355.58946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.822	1	2.4753	1.9753	2.9753	0.65331								0	0	0	0.66254	1	747	747		0.15932	0	1		+		27313	9166	13455	13512	31343	31343					-0.0741076448136937
QNWTPCLL	8	Unmodified	_QNWTPCLL_					0	0	0		ENST00000418983.1_1_6:29759532-29760213:-|nuORF	ENST00000418983.1_1_6:29759532-29760213:-|nuORF	ENST00000418983.1_1_6:29759532-29760213:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	324.8294860720634	3	325.496989	973.469137	0.88885	0.00028932	1.7536	0.00057079	2.6424	0.00086011	325.49744300564385	68.165	0.28014	69.543	69.394	69.675	1.3778					14	8	2	0	0	0	2.3239	1	28615	28615		2.9952	0.49676	1	1016400			27314	6432	13456	13513	31344	31344					-0.018658440087165218
QNYHQQDFR	9	Unmodified	_QNYHQQDFR_					0	0	0		ENSG00000173575|ENST00000394196|CHD2	ENSG00000173575|ENST00000394196|CHD2	ENSG00000173575|ENST00000394196|CHD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.5238830447197	3	412.523254	1234.54793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.438	1	32.438	31.938	32.938	0								0	0	0	0.42693	1	13590	13590		0.86438	0.087843	1				27315	4288	13457	13514	31345	31345					-0.05995900450056979
QPALALAVL	9	Unmodified	_QPALALAVL_					0	0	0		ENST00000551538.5_1_14:105961883-105962582:+|nuORF	ENST00000551538.5_1_14:105961883-105962582:+|nuORF	ENST00000551538.5_1_14:105961883-105962582:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	895.5612060427666	1	895.56113	894.553853	1.1797	0.0010565	-0.67334	-0.00060302	0.50634	0.00045346	895.5604708286704	66.987	0.55018	68.876	68.436	68.986	1.8889					22	17	2	0	0	0	0.13873	1	28085	28085		39.957	0	1	1595500			27316	7268	13458	13515	31346	31346					0.10235849799562402
QPALALAVL	9	Unmodified	_QPALALAVL_					0	0	0		ENST00000551538.5_1_14:105961883-105962582:+|nuORF	ENST00000551538.5_1_14:105961883-105962582:+|nuORF	ENST00000551538.5_1_14:105961883-105962582:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	895.5633422732353	1	895.56113	894.553853	1.2048	0.001079	-0.49565	-0.00044388	0.70915	0.00063509	895.560698672428	67.423	0.49011	69.293	68.999	69.489	1.87					28	15	2	0	0	0	0.076627	1	28239	28239		57.471	6.6163	1	2139400			27317	7268	13458	13515	31347	31347					0.10235849799562402
QPAPCGSQ	8	Unmodified	_QPAPCGSQ_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000509566.1_1_4:844107-866085:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.1741821169853	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.677	1	18.677	18.177	19.177	0								0	0	0	1.0178	1	7764	7764		2.3027	0	1				27318	4496	13459	13516	31348	31348					-0.0686753851936146
QPGPHVVK	8	Unmodified	_QPGPHVVK_					0	0	0		FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNB|p.T1593Ifs*40|1|0.08|ENSG00000136068|chr3:58136084-58136085|-/TCTATCAAGTC|frameshift_variant;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-4|FLNB;FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant;FLNB|p.S2513Rfs*5|1|0.04|ENSG00000136068|chr3:58169710-58169711|-/GATTC|frameshift_variant;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-7|FLNB	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	861.4970580935478	1	861.494113	860.486836	3.0076	0.002591	0.89132	0.00076787	3.8989	0.0033589	861.4952492560196	106.2	0.14624	106.36	106.26	106.41	0.15781					14	7	3	0	0	0	0.89178	1	45429	45429		0.69038	0	1	15754000			27319	2705	13460	13517	31349	31349					0.05101239308476124
QPHKRGAR	8	Unmodified	_QPHKRGAR_					0	0	0		ENST00000581347.2_1_18:5895340-5895915:-|nuORF	ENST00000581347.2_1_18:5895340-5895915:-|nuORF	ENST00000581347.2_1_18:5895340-5895915:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	475.8061096072197	2	475.275567	948.53658	1.7223	0.00081856	-2.7814	-0.0013219	-1.0591	-0.00050337	475.2744963381316	107.75	0.13919	107.75	107.68	107.82	0					13	7	3	0	0	0	2.3239	1	46252	46252		4.756	0.81161	1	19675000			27320	7435	13461	13518	31350	31350					0.06025367037136675
QPHKRGAR	8	Unmodified	_QPHKRGAR_					0	0	0		ENST00000581347.2_1_18:5895340-5895915:-|nuORF	ENST00000581347.2_1_18:5895340-5895915:-|nuORF	ENST00000581347.2_1_18:5895340-5895915:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	475.8068725466728	2	475.275567	948.53658	3.2867	0.0015621	-4.1598	-0.0019771	-0.87309	-0.00041496	475.27367437768186	107.71	0.1439	107.87	107.77	107.92	0.15781					16	7	3	0	0	0	2.3239	1	46374	46374		4.756	2.9118	1	71543000			27321	7435	13461	13518	31351	31351					0.06025367037136675
QPHLKRKA	8	Unmodified	_QPHLKRKA_					0	0	0		CST3|p.F122Pfs*22|1|0.04|ENSG00000101439|chr20:23633994-23633995|-/CCCGCCGGCTGCGGAGGGGA|frameshift_variant;ENSG00000101439|ENST00000376925|CST3	CST3|p.F122Pfs*22|1|0.04|ENSG00000101439|chr20:23633994-23633995|-/CCCGCCGGCTGCGGAGGGGA|frameshift_variant	CST3|p.F122Pfs*22|1|0.04|ENSG00000101439|chr20:23633994-23633995|-/CCCGCCGGCTGCGGAGGGGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3036682009697	2	489.303793	976.593033	3.3026	0.001616	-3.1956	-0.0015636	0.10693	5.232E-05	489.3016861069035	107.66	0.18332	107.82	107.7	107.88	0.15795					29	9	4	0	0	0	0.89051	1	46283	46283		2.3027	1.6124	1	240050000			27322	381	13462	13519	31352	31352					0.1037999487379011
QPILLKKIIEK	11	Unmodified	_QPILLKKIIEK_					0	0	0		ENSG00000119912|ENST00000265986|IDE;nc|ENSG00000119912|P14735-2|IDE;ENST00000496903.5_1_10:94214203-94257457:-|nuORF;ENST00000478361.6_1_10:94234505-94239065:-|nuORF	ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94234505-94239065:-|nuORF	ENSG00000119912|ENST00000265986|IDE	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9449951052666	2	661.942131	1321.86971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.529	1	62.529	62.029	63.029	0								0	0	0	0.63775	1	26069	26069		2.9952	1.3426	1				27323	2089;6801	13463	13520	31353	31353					0.22164803527380172
QPKDWLMIL	9	Unmodified	_QPKDWLMIL_					0	0	0		tr|A0A553SP67|A0A553SP67_NIACICalcium-translocatingP-typeATPase,SERCA-typeOS=NialliacirculansOX=1397GN=CEQ21_25800PE=4SV=1	tr|A0A553SP67|A0A553SP67_NIACICalcium-translocatingP-typeATPase,SERCA-typeOS=NialliacirculansOX=1397GN=CEQ21_25800PE=4SV=1	tr|A0A553SP67|A0A553SP67_NIACICalcium-translocatingP-typeATPase,SERCA-typeOS=NialliacirculansOX=1397GN=CEQ21_25800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3151733279228	2	572.315177	1142.6158	2.8231	0.0016157	-2.3539	-0.0013472	0.46917	0.00026851	572.3137182065758	65.358	1.235	66.757	66.193	67.428	1.3989					136	39	4	0	0	0	0.057024	1	27457	27457		65.235	0	1	21138000			27324	16454	13464	13521	31354	31354					0.05019833156393361
QPLEASIEMRE	11	Unmodified	_QPLEASIEMRE_					0	0	0			REV__nc|ENSG00000159459|Q8IWV7-2|UBR1	REV__nc|ENSG00000159459|Q8IWV7-2|UBR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8829223513603	3	434.88346	1301.62855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6568	1	3.7588	3.2588	4.2588	0.10199								0	0	0	0.63775	1	1509	1509		0.45452	0.29519	1		+		27325	10575	13465	13522	31355	31355					-0.0101980024205659
QPLIIAVVL	9	Unmodified	_QPLIIAVVL_					0	0	0		nc|ENSG00000181856|P14672-2|SLC2A4;ENSG00000181856|ENST00000317370|SLC2A4	nc|ENSG00000181856|P14672-2|SLC2A4	nc|ENSG00000181856|P14672-2|SLC2A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.3250610232353	2	483.323328	964.632104	4.2298	0.0020444	-0.32024	-0.00015478	3.9096	0.0018896	483.32317502519385	91.051	0.31917	92.033	91.846	92.165	0.98156					13	9	2	0	0	0	0.46905	1	38371	38371		16.942	0	1	307660			27326	4589	13466	13523	31356	31356					0.1483728238479216
QPLIIAVVL	9	Unmodified	_QPLIIAVVL_					0	0	0		nc|ENSG00000181856|P14672-2|SLC2A4;ENSG00000181856|ENST00000317370|SLC2A4	nc|ENSG00000181856|P14672-2|SLC2A4	nc|ENSG00000181856|P14672-2|SLC2A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.3250915408134	2	483.323328	964.632104	3.7014	0.001789	-0.0017727	-8.5677E-07	3.6996	0.0017881	483.3231613254301	90.537	0.22838	91.903	91.831	92.06	1.366					10	6	2	0	0	0	0.46905	1	38173	38173		16.942	0	1	449780			27327	4589	13466	13523	31357	31357					0.1483728238479216
QPLTNTQLVC	10	Carbamidomethyl (C)	_QPLTNTQLVC(Carbamidomethyl (C))_	QPLTNTQLVC(1)		QPLTNTQLVC(46)		0	1	0		ENST00000367627.7_1_1:179064443-179064515:+|nuORF	ENST00000367627.7_1_1:179064443-179064515:+|nuORF	ENST00000367627.7_1_1:179064443-179064515:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.3009521365166	2	587.300255	1172.58596	2.0204	0.0011866	-0.027556	-1.6184E-05	1.9928	0.0011704	587.3003906205143	58.62	0.38686	60.589	60.457	60.844	1.969					25	12	3	0	0	0	0.22673	1	24625	24625		45.7	7.7256	1	3391500			27328	6070	13467	13524	31358	31358	10				0.006568494203975206
QPLVNLLV	8	Unmodified	_QPLVNLLV_					0	0	0		nc|ENSG00000169126|Q5T2S8-2|ODAD2;ENSG00000169126|ENST00000305242|ODAD2	nc|ENSG00000169126|Q5T2S8-2|ODAD2	nc|ENSG00000169126|Q5T2S8-2|ODAD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2849304080009	2	448.284203	894.553853	2.2607	0.0010134	0.86418	0.0003874	3.1248	0.0014008	448.2846590651614	68.001	0.69944	69.378	69.007	69.706	1.3778					54	22	3	0	0	0	0.83518	1	28390	28390		18.135	1.1927	1	9984500			27329	4069	13468	13525	31359	31359					0.10235849799573771
QPMDIHVEL	9	Unmodified	_QPMDIHVEL_					0	0	0		nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2722045779228	2	541.270967	1080.52738	2.3352	0.001264	-2.7518	-0.0014895	-0.41667	-0.00022553	541.2695923725171	49.765	0.62001	51.156	50.704	51.324	1.3911					34	19	3	0	0	0	0.27148	2	20811	20811;20862		26.884	5.137	1	2616200			27330	2390	13469	13526	31360;31361	31360					-0.009662071540560646
QPMDIHVEL	9	Unmodified	_QPMDIHVEL_					0	0	0		nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2706176638603	2	541.270967	1080.52738	1.8135	0.00098161	-2.4276	-0.001314	-0.61403	-0.00033236	541.2697072322023	49.219	0.61904	51.196	50.73	51.349	1.9772					36	19	3	0	0	0	0.27148	2	20593	20593;20641		26.884	5.137	1	2249000			27331	2390	13469	13526	31362;31363	31362					-0.009662071540560646
QPNPLPLRL	9	Unmodified	_QPNPLPLRL_					0	0	0		nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1	nc|ENSG00000078674|Q15154-2|PCM1	nc|ENSG00000078674|Q15154-2|PCM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3216430544853	2	524.319109	1046.62366	1.0455	0.00054817	-0.59999	-0.00031458	0.4455	0.00023358	524.3191119376756	51.89	0.36532	53.286	53.095	53.46	1.3966					20	12	2	0	0	0	0.12251	2	21772	21726;21772		41.84	27.258	1	2501200			27332	979	13470	13527	31364;31365	31365					0.10221728468172842
QPNPLPLRL	9	Unmodified	_QPNPLPLRL_					0	0	0		nc|ENSG00000078674|Q15154-2|PCM1;nc|ENSG00000078674|Q15154-5|PCM1;ENSG00000078674|ENST00000325083|PCM1	nc|ENSG00000078674|Q15154-2|PCM1	nc|ENSG00000078674|Q15154-2|PCM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3206054568291	2	524.319109	1046.62366	0.14802	7.7612E-05	-1.1533	-0.00060469	-1.0053	-0.00052707	524.319412041582	51.321	0.42231	53.296	53.007	53.429	1.9753					21	16	2	0	0	0	0.44512	2	21482	21482;21525		18.146	4.6385	1	2946200			27333	979	13470	13527	31366;31367	31366					0.10221728468172842
QPPLLLLLLL	10	Unmodified	_QPPLLLLLLL_					0	0	0		nc|ENSG00000090554|P49771-3|FLT3LG;ENSG00000090554|ENST00000597551|FLT3LG	nc|ENSG00000090554|P49771-3|FLT3LG	nc|ENSG00000090554|P49771-3|FLT3LG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	377.7258788943291	3	378.261649	1131.76312	2.6935	0.0010189	2.4373	0.00092194	5.1308	0.0019408	378.26305108419234	63.873	0.18353	65.801	65.643	65.827	1.928					8	5	2	0	0	0	0.1256	1	26780	26780		0.69767	0	1	315040			27334	1139	13471	13528	31368	31368					0.20250673032865052
QPPLSVLPV	9	Unmodified	_QPPLSVLPV_					0	0	0		ENST00000382361.7_1_7:5645882-5646230:+|nuORF	ENST00000382361.7_1_7:5645882-5646230:+|nuORF	ENST00000382361.7_1_7:5645882-5646230:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1960021853447	3	317.195416	948.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.05	1	105.05	104.55	105.55	0								0	0	0	0.42693	1	44498	44498		1.0715	0	1				27335	6239	13472	13529	31369	31369					0.08807832453987885
QPPLSVLPV	9	Unmodified	_QPPLSVLPV_					0	0	0		ENST00000382361.7_1_7:5645882-5646230:+|nuORF	ENST00000382361.7_1_7:5645882-5646230:+|nuORF	ENST00000382361.7_1_7:5645882-5646230:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	317.1956054568291	3	317.195416	948.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.92	1	105.09	104.59	105.59	0.16679								0	0	0	0.42693	1	44514	44514		1.0715	0	1				27336	6239	13472	13529	31370	31370					0.08807832453987885
QPPSRRELELE	11	Unmodified	_QPPSRRELELE_					0	0	0			REV__nc|ENSG00000182095|O15417-4|TNRC18	REV__nc|ENSG00000182095|O15417-4|TNRC18	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9089233279228	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8925	1	8.5197	8.0197	9.0197	0.62713								0	0	0	0.63775	1	3267	3267		0	0	1		+		27337	14501	13473	13530	31371	31371					0.0425833964964113
QPPSRRELELE	11	Unmodified	_QPPSRRELELE_					0	0	0			REV__nc|ENSG00000182095|O15417-4|TNRC18	REV__nc|ENSG00000182095|O15417-4|TNRC18	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9088928103447	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0422	1	9.7768	9.2768	10.277	0.73452								0	0	0	0.63775	1	3761	3761		0	0	1		+		27338	14501	13473	13530	31372	31372					0.0425833964964113
QPQAKIIVL	9	Unmodified	_QPQAKIIVL_					0	0	0		nc|ENSG00000168092|P68402-2|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-4|PAFAH1B2;ENSG00000168092|ENST00000527958|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3249694705009	2	505.32386	1008.63317	2.5589	0.0012931	-0.69338	-0.00035038	1.8655	0.0009427	505.3234566556559	40.339	0.39835	41.649	41.421	41.819	1.3102					21	12	2	0	0	0	0.1735	1	16914	16914		36.044	9.1605	1	5533700			27339	4016	13474	13531	31373	31373					0.12919496753693238
QPQAKIIVL	9	Unmodified	_QPQAKIIVL_					0	0	0		nc|ENSG00000168092|P68402-2|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-4|PAFAH1B2;ENSG00000168092|ENST00000527958|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3246948122978	2	505.32386	1008.63317	1.7618	0.0008903	0.40893	0.00020664	2.1708	0.0010969	505.3240376837506	39.86	0.40315	41.722	41.552	41.956	1.8624					24	12	2	0	0	0	0.46905	1	16729	16729		16.942	3.4344	1	4540100			27340	4016	13474	13531	31374	31374					0.12919496753693238
QPQKRRLL	8	Unmodified	_QPQKRRLL_					0	0	0		ENSG00000278685|ENST00000615129|IQCA1L	ENSG00000278685|ENST00000615129|IQCA1L	ENSG00000278685|ENST00000615129|IQCA1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.8323242068291	2	519.830175	1037.6458	1.4653	0.00076169	1.6531	0.00085934	3.1184	0.001621	519.8313570969057	107.69	0.18922	107.69	107.55	107.74	0					24	9	4	0	0	0	0.89178	1	46188	46188		0.69038	0	1	45026000			27341	5478	13475	13532	31375	31375					0.12847952936613183
QPQLHPDV	8	Unmodified	_QPQLHPDV_					0	0	0		ASXL1|p.L890Sfs*18|1|0.25|ENSG00000171456|chr20:32435380-32435380|C/-|frameshift_variant;ASXL1|p.Y974Lfs*8|1|0.46|ENSG00000171456|chr20:32435630-32435631|-/T|frameshift_variant;ENSG00000171456|ENST00000375687|ASXL1	ASXL1|p.L890Sfs*18|1|0.25|ENSG00000171456|chr20:32435380-32435380|C/-|frameshift_variant	ASXL1|p.L890Sfs*18|1|0.25|ENSG00000171456|chr20:32435380-32435380|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2445861697197	2	467.243067	932.47158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.28	1	101.47	100.97	101.97	0.19076								0	0	0	1.0178	1	42585	42585		2.3027	0	1				27342	85	13476	13533	31376	31376					0.0026432772060616117
QPQQLVLRL	9	Unmodified	_QPQQLVLRL_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;ITGB1-SEPT2|1|fusion;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8386718630791	2	547.837665	1093.66078	1.295	0.00070947	1.1524	0.00063131	2.4474	0.0013408	547.8381965908213	48.975	0.40616	50.363	50.17	50.577	1.388					35	12	4	0	0	0	0.0092758	2	20484	20484;20538		108	15.175	1	8693300			27343	3263	13477	13534	31377;31378	31377					0.1176940001391813
QPQQLVLRL	9	Unmodified	_QPQQLVLRL_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;ITGB1-SEPT2|1|fusion;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.8387939333916	2	547.837665	1093.66078	2.0464	0.0011211	-0.27511	-0.00015072	1.7712	0.00097036	547.8374047727038	48.457	0.46335	50.435	50.206	50.669	1.9772					37	14	4	0	0	0	0.0092758	2	20314	20264;20314		108	15.175	1	6180700			27344	3263	13477	13534	31379;31380	31380					0.1176940001391813
QPRALASLP	9	Unmodified	_QPRALASLP_					0	0	0			REV__ENST00000415259.5_2_3:51705304-51705712:+|nuORF	REV__ENST00000415259.5_2_3:51705304-51705712:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1906921267509	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.15	1	104.31	103.81	104.81	0.16055								0	0	0	0.42693	1	44064	44064		0.26902	0	1		+		27345	12940	13478	13535	31381	31381					0.07245180025688569
QPRKRLVSV	9	Unmodified	_QPRKRLVSV_					0	0	0		ENSG00000140406|ENST00000267984|TLNRD1	ENSG00000140406|ENST00000267984|TLNRD1	ENSG00000140406|ENST00000267984|TLNRD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8434326052666	2	541.843282	1081.67201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.62	1	107.78	107.28	108.28	0.15781								0	0	0	0.42693	1	46340	46340		1.8442	0	1				27346	2915	13479	13536	31382	31382					0.13444222108091708
QPRNILKKH	9	Unmodified	_QPRNILKKH_					0	0	0			REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3514892458916	2	567.348732	1132.68291	1.1963	0.00067875	3.5916	0.0020377	4.788	0.0027165	567.3508443496738	96.878	0.15267	96.878	96.772	96.925	0					7	4	2	0	0	0	0.83753	1	40505	40505		1.8442	1.2427	1	1655500	+		27347	11656	13480	13537	31383	31383					0.1218762448236248
QPRNILKKH	9	Unmodified	_QPRNILKKH_					0	0	0			REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	567.348732	1132.68291	1.1963	0.00067875	3.5916	0.0020377	4.788	0.0027165	567.3508443496738	96.878	0.15267	96.878	96.772	96.925	0	0.004214	0.0024711	NaN	1.8442	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1655500	+		27348	11656	13480	13537							0.1218762448236248
QPRNILKKH	9	Unmodified	_QPRNILKKH_					0	0	0			REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	REV__nc|ENSG00000197057|Q6ZMT9-2|DTHD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	567.348732	1132.68291	2.6122	0.001482	0.34544	0.00019599	2.9577	0.001678	567.3488330544463	96.764	0.1578	96.869	96.816	96.974	0.105	-0.004214	-0.0012124	NaN	1.8442	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533900	+		27349	11656	13480	13537							0.1218762448236248
QPRYRDPHYR	10	Unmodified	_QPRYRDPHYR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3527709841728	2	694.352534	1386.69051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.93	1	116.93	116.43	117.43	0								0	0	0	0.66087	1	50429	50429		2.9952	0	1		+		27350	8647	13481	13538	31384	31384					0.012637320119893047
QPSDLIFEF	9	Unmodified	_QPSDLIFEF_					0	0	0		ELF4|p.W251Dfs*11|1|0.24|ENSG00000102034|chrX:130071098-130071099|-/TC|frameshift_variant;ENSG00000102034|ENST00000308167|ELF4	ELF4|p.W251Dfs*11|1|0.24|ENSG00000102034|chrX:130071098-130071099|-/TC|frameshift_variant	ELF4|p.W251Dfs*11|1|0.24|ENSG00000102034|chrX:130071098-130071099|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.2740356326103	2	548.27149	1094.52843	3.1711	0.0017386	0.9307	0.00051028	4.1018	0.0022489	548.2718459992126	82.532	0.38263	83.744	83.537	83.92	1.2125					22	11	3	0	0	0	0.27148	1	34650	34650		26.884	5.137	1	1256700			27351	447	13482	13539	31385	31385					-0.015056695135399423
QPSYFPVPEV	10	Unmodified	_QPSYFPVPEV_					0	0	0		tr|A0A553SMY7|A0A553SMY7_NIACIAconitatehydrataseOS=NialliacirculansOX=1397GN=acnAPE=3SV=1	tr|A0A553SMY7|A0A553SMY7_NIACIAconitatehydrataseOS=NialliacirculansOX=1397GN=acnAPE=3SV=1	tr|A0A553SMY7|A0A553SMY7_NIACIAconitatehydrataseOS=NialliacirculansOX=1397GN=acnAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.7942382693291	2	581.792589	1161.57063	2.6783	0.0015582	1.1225	0.00065306	3.8008	0.0022113	581.793232958968	78.815	0.46872	80.082	79.848	80.316	1.2668					37	14	4	0	0	0	0.72878	1	33055	33055		17.113	3.2068	1	1883000			27352	16402	13483	13540	31386	31386					-0.0036969410516576318
QPTFTEHLL	9	Unmodified	_QPTFTEHLL_					0	0	0		nc|ENSG00000197568|Q9XRX5-3|ANKRD13C-DT;nc|ENSG00000197568|Q9XRX5|ANKRD13C-DT;nc|ENSG00000197568|Q9XRX5-2|ANKRD13C-DT	nc|ENSG00000197568|Q9XRX5-3|ANKRD13C-DT	nc|ENSG00000197568|Q9XRX5-3|ANKRD13C-DT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2841674685478	2	543.284931	1084.55531	2.1727	0.0011804	-1.176	-0.00063892	0.99664	0.00054146	543.2845716473818	43.748	0.47223	45.692	45.485	45.957	1.9438					27	14	3	0	0	0	0.46905	2	18323	18323;18374		16.942	7.5592	1	1367400			27353	7967	13484	13541	31387;31388	31387					0.0164143909764789
QPTLVIMEL	9	Unmodified	_QPTLVIMEL_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant;ENSG00000140443|ENST00000650285|IGF1R	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2950927615166	2	522.293911	1042.57327	3.2913	0.001719	-0.042322	-2.2105E-05	3.2489	0.0016969	522.2938168563815	81.133	0.65015	82.367	82.161	82.811	1.2332					75	20	5	0	0	0	8.9999E-05	4	34113	34028;34075;34113;34152		147.06	31.367	1	14968000			27354	630;2916	13485	13542	31389;31390;31391;31392	31391					0.0536843802817657
QPTLVIMEL	9	Unmodified	_QPTLVIMEL_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant;ENSG00000140443|ENST00000650285|IGF1R	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1043.583666980267	1	1043.58054	1042.57327	2.9078	0.0030345	1.6797	0.0017529	4.5875	0.0047874	1043.581992979425	81.186	0.37152	82.42	82.255	82.626	1.2332					26	11	3	0	0	0	2.4291E-05	2	34102	34055;34102		168.66	68.86	1	4184300			27355	630;2916	13485	13542	31393;31394	31394					0.0536843802817657
QPTLVIMEL	9	Unmodified	_QPTLVIMEL_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant;ENSG00000140443|ENST00000650285|IGF1R	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1043.586108386517	1	1043.58054	1042.57327	3.2904	0.0034338	0.39474	0.00041194	3.6851	0.0038457	1043.5800874180934	80.776	0.36845	82.472	82.272	82.64	1.6959					25	11	3	0	0	0	2.4291E-05	3	33878	33834;33878;33933		168.66	45.208	1	4581700			27356	630;2916	13485	13542	31395;31396;31397	31396					0.0536843802817657
QPTLVIMEL	9	Unmodified	_QPTLVIMEL_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant;ENSG00000140443|ENST00000650285|IGF1R	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2952758669853	2	522.293911	1042.57327	2.1513	0.0011236	0.65095	0.00033999	2.8023	0.0014636	522.2943585417024	80.747	0.61958	82.443	82.21	82.829	1.6959					64	19	5	0	0	0	8.9999E-05	3	33904	33853;33904;33962		147.06	33.004	1	14580000			27357	630;2916	13485	13542	31398;31399;31400	31399					0.0536843802817657
QPVIPSLKL	9	Unmodified	_QPVIPSLKL_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8203613162041	2	497.81841	993.622267	3.1218	0.0015541	-3.0537	-0.0015202	0.068028	3.3865E-05	497.8171443887011	107.66	0.16335	107.82	107.72	107.88	0.15781					23	8	3	0	0	0	0.83753	1	46339	46339		1.8442	0.36234	1	232060000			27358	33	13486	13543	31401	31401					0.12520094379431157
QPVIPSLKL	9	Unmodified	_QPVIPSLKL_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	497.81841	993.622267	3.3689	0.0016771	-3.5526	-0.0017685	-0.18367	-9.1433E-05	497.81666094178166	107.69	0.18265	107.74	107.64	107.82	0.052452	-0.042601	-0.0002568	NaN	1.8442	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	115300000			27359	33	13486	13543							0.12520094379431157
QPVIPSLKL	9	Unmodified	_QPVIPSLKL_					0	0	0		AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant;AKAP6|p.C1453Wfs*29|1|0.37|ENSG00000151320|chr14:32822170-32822173|TGTT/-|frameshift_variant;ENSG00000151320|ENST00000280979|AKAP6;AKAP6|p.M2317Hfs*14|1|0.04|ENSG00000151320|chr14:32824761-32824762|-/CATGGGAAAGAGATTTCAGAGAGTGAGCATTGTA|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	AKAP6|p.S1378Cfs*4|1|0.03|ENSG00000151320|chr14:32821945-32821946|-/GTTATCC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	497.81841	993.622267	3.131	0.0015587	-3.2957	-0.0016407	-0.16475	-8.2016E-05	497.8168801558819	107.64	0.16417	107.8	107.7	107.86	0.15795	0.012402	-1.0614E-06	NaN	1.8442	28	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151520000			27360	33	13486	13543							0.12520094379431157
QPVPKIPK	8	Unmodified	_QPVPKIPK_					0	0	0			REV__nc|ENSG00000145626|Q6NUS8-2|UGT3A1	REV__nc|ENSG00000145626|Q6NUS8-2|UGT3A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	453.7933837771416	2	453.792195	905.569838	3.3619	0.0015256	-3.5488	-0.0016104	-0.18691	-8.4817E-05	453.7909976221047	107.73	0.1084	107.89	107.83	107.93	0.15781					13	5	3	0	0	0	0.89178	1	46417	46417		0.69038	0	1	70808000	+		27361	10277	13487	13544	31402	31402					0.11327556036462738
QPVVSKQYTF	10	Unmodified	_QPVVSKQYTF_					0	0	0		ENSG00000145362|ENST00000357077|ANK2	ENSG00000145362|ENST00000357077|ANK2	ENSG00000145362|ENST00000357077|ANK2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	599.3597289919853	2	598.819138	1195.62372	1.4251	0.00085338	-0.089012	-5.3302E-05	1.3361	0.00080008	598.8192344514413	58.665	0.384	60.083	59.845	60.229	1.4181					19	11	2	0	0	0	0.12386	1	24550	24550		19.362	4.5237	1	1976600			27362	3107	13488	13545	31403	31403					0.033736836775233314
QQHEDNKYF	9	Unmodified	_QQHEDNKYF_					0	0	0		MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant;nc|ENSG00000099331|Q13459-2|MYO9B;ENSG00000099331|ENST00000682292|MYO9B	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MYO9B|p.P1393Qfs*60|1|0.26|ENSG00000099331|chr19:17198247-17198247|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7735473513603	2	604.770177	1207.5258	2.0281	0.0012265	3.3285	0.002013	5.3565	0.0032395	604.7723106840883	48.387	1.5749	50.364	49.837	51.412	1.9772					138	50	3	0	0	0	0.39927	1	20393	20393		20.454	2.3186	1	4746800			27363	1207	13489	13546	31404	31404					-0.06966124918471905
QQIKRNIG	8	Unmodified	_QQIKRNIG_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;nc|ENSG00000054654|Q8WXH0-7|SYNE2;ENST00000394768.6_2_14:64542710-64692241:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7862731814384	2	478.785433	955.556313	3.4186	0.0016368	-0.83721	-0.00040084	2.5814	0.0012359	478.7848727867774	74.753	0.46461	75.078	74.802	75.267	0.32463					45	14	4	0	0	0	0.89051	1	31306	31306		2.3027	0.24298	1	9049000			27364	716	13490	13547	31405	31405					0.0767569825721921
QQILLGKL	8	Unmodified	_QQILLGKL_					0	0	0		L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|16|1|sense	L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|16|1|sense	L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|16|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	912.5909301638603	1	912.587679	911.580402	2.866	0.0026155	0.64338	0.00058714	3.5094	0.0032026	912.5881076572327	109.18	0.28734	109.34	109.21	109.5	0.15898					41	13	4	0	0	0	0.89187	1	47399	47399		0.69038	0	1	164170000			27365	7721	13491	13548	31406	31406					0.1210753869090695
QQISHLVIM	9	Unmodified	_QQISHLVIM_					0	0	0		VCL-ADK|12|fusion;VCL-ADK|3|fusion;VCL-ADK|1|fusion;VCL-ADK|4|fusion;VCL-ADK|13|fusion;VCL-ADK|5|fusion;VCL-ADK|6|fusion;VCL-ADK|8|fusion;VCL-ADK|2|fusion;VCL|p.R832Efs*23|1|0.05|ENSG00000035403|chr10:74107288-74107288|C/-|frameshift_variant;nc|ENSG00000035403|P18206-2|VCL;ENSG00000035403|ENST00000211998|VCL;ENST00000478896.2_1_10:75757878-75863603:+|nuORF;VCL-KIAA0913|1|fusion;VCL-KIAA0913|3|fusion;VCL-KIAA0913|2|fusion;VCL-ADK|9|fusion;VCL-ADK|11|fusion;VCL-ADK|7|fusion;VCL-ADK|10|fusion	VCL-ADK|12|fusion;VCL-KIAA0913|1|fusion;VCL-ADK|9|fusion	VCL-ADK|9|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7980224490166	2	534.797152	1067.57975	1.9659	0.0010514	-0.1764	-9.434E-05	1.7895	0.00095701	534.7975668781896	42.462	0.37407	44.383	44.196	44.57	1.9211					22	11	3	0	0	0	0.10294	1	17804	17804		48.346	4.4876	1	2022700			27366	17353;17354;17352	13492	13549	31407	31407					0.048663759795317674
QQKHHLENEK	10	Unmodified	_QQKHHLENEK_					0	0	0		ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	ENSG00000204103|ENST00000373313|MAFB	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889037966728	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.159	1	13.885	13.385	14.385	0.72639								0	0	0	0.66151	1	5464	5464		1.9064	0	1				27367	5123	13493	13550	31408	31408					0.014409171639044871
QQKHRIRRVLI	11	Unmodified	_QQKHRIRRVLI_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;nc|ENSG00000094631|Q9UBN7-2|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2536804080009	4	362.48366	1445.90553	-0.61544	-0.00022309	0.25017	9.0681E-05	-0.36527	-0.00013241	362.7350504026785	50.992	1.32	50.992	50.47	51.789	0					53	41	2	0	0	0	0.14606	1	21115	21115		0.094841	0.011491	1	1234700			27368	1175	13494	13551	31409	31409					0.2004169854758402
QQKHRIRRVLI	11	Unmodified	_QQKHRIRRVLI_					0	0	0		ENSG00000094631|ENST00000334136|HDAC6;nc|ENSG00000094631|Q9UBN7-2|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	ENSG00000094631|ENST00000334136|HDAC6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2538635134697	4	362.48366	1445.90553	1.5034	0.00054495	-1.9359	-0.00070175	-0.43255	-0.00015679	362.7335082948713	48.1	0.59286	48.43	48.196	48.788	0.33034					49	19	3	0	0	0	0.14606	1	20279	20279		0.094841	0.011491	1	1847800			27369	1175	13494	13551	31410	31410					0.2004169854758402
QQKRVRGWWPF	11	Unmodified	_QQKRVRGWWPF_					0	0	0		ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	ENSG00000214814|ENST00000522917|FER1L6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.6066161990166	3	496.605472	1486.79459	1.51	0.00074986	-1.3096	-0.00065037	0.20033	9.9483E-05	496.604980530399	42.84	0.91724	42.84	42.447	43.365	0					66	29	4	0	0	0	1.0388	1	17833	17833		0.50596	0.051438	1	1283000			27370	5247	13495	13552	31411	31411					0.07066058839495781
QQKVVIYGQ	9	Unmodified	_QQKVVIYGQ_					0	0	0			REV__ENST00000400546.5_1_21:22656642-22656705:+|nuORF	REV__ENST00000400546.5_1_21:22656642-22656705:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8008300662041	2	531.800749	1061.58694	1.5347	0.00081616	-1.8046	-0.00095971	-0.26993	-0.00014355	531.7999236059228	38.28	0.39342	39.576	39.35	39.743	1.2961					27	12	3	0	0	0	0.39927	1	16071	16071		20.454	0.039092	1	3457300	+		27371	12881	13496	13553	31412	31412					0.05861431851622001
QQKVVIYGQ	9	Unmodified	_QQKVVIYGQ_					0	0	0			REV__ENST00000400546.5_1_21:22656642-22656705:+|nuORF	REV__ENST00000400546.5_1_21:22656642-22656705:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	531.800749	1061.58694	1.5347	0.00081616	-1.8046	-0.00095971	-0.26993	-0.00014355	531.7999236059228	38.28	0.39342	39.576	39.35	39.743	1.2961	0.017082	-0.0002162	NaN	20.454	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3457300	+		27372	12881	13496	13553							0.05861431851622001
QQLRLLLRIPL	11	Unmodified	_QQLRLLLRIPL_					0	0	0		ENST00000234610.5_1_1:1631484-1633139:+|nuORF	ENST00000234610.5_1_1:1631484-1633139:+|nuORF	ENST00000234610.5_1_1:1631484-1633139:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.4780151247978	4	341.479049	1361.88709	-1.9776	-0.0006753	-0.75146	-0.00025661	-2.729	-0.00093191	341.4787811110591	29.292	1.0151	29.292	28.993	30.008	0					102	32	5	0	0	0	1.0402	1	12328	12328		0.094841	0	1	29706000			27373	5557	13497	13554	31413	31413					0.22062143853031557
QQLRRDSAEER	11	Unmodified	_QQLRRDSAEER_					0	0	0			REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	694.3552123904228	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.313	1	86.313	85.813	86.813	0								0	0	0	0.63775	1	35968	35968		6.6304	1.3335	1		+		27374	10402	13498	13555	31414	31414					0.018507857329723265
QQLRRDSAEER	11	Unmodified	_QQLRRDSAEER_					0	0	0			REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	694.3542358279228	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.111	1	71.434	70.934	71.934	0.32359								0	0	0	0.63773	1	29764	29764		8.9762	0.82072	1		+		27375	10402	13498	13555	31415	31415					0.018507857329723265
QQLRRDSAEER	11	Unmodified	_QQLRRDSAEER_					0	0	0			REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	REV__ENST00000502495.1_1_4:129873642-129918394:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3538085818291	2	694.355471	1386.69639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.227	1	45.171	44.671	45.671	1.9438								0	0	0	0.63775	1	18122	18122		6.6304	0.89852	1		+		27376	10402	13498	13555	31416	31416					0.018507857329723265
QQRHLLRGV	9	Unmodified	_QQRHLLRGV_					0	0	0		ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8309203982353	2	553.830706	1105.64686	1.2785	0.00070807	-0.43451	-0.00024064	0.84399	0.00046743	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.83753	1	30219	30219		1.8442	0.36234	1	6275300			27377	17361	13499	13556	31417	31417					0.09826167305527633
QQRHLLRGV	9	Unmodified	_QQRHLLRGV_					0	0	0		ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8316528201103	2	553.830706	1105.64686	1.9187	0.0010627	-0.46045	-0.00025501	1.4583	0.00080764	553.8302104494187	72.464	2.1267	72.789	71.785	73.912	0.32494					193	67	4	0	0	0	0.7849	2	30228	30228;30267		3.9444	1.0552	1	7300500			27378	17361	13499	13556	31418;31419	31418					0.09826167305527633
QQRLPKYFLL	10	Unmodified	_QQRLPKYFLL_					0	0	0			REV__ENST00000331920.10_1_9:98231408-98238427:-|nuORF	REV__ENST00000331920.10_1_9:98231408-98238427:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	653.3892700076103	2	653.387522	1304.76049	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.87	1	114.05	113.55	114.55	0.17579								0	0	0	0.66237	1	49357	49357		0.45834	0	1		+		27379	12448	13500	13557	31420	31420					0.1203021762789831
QQRRRPVRVA	10	Unmodified	_QQRRRPVRVA_					0	0	0			REV__ENSG00000182752|ENST00000328252|PAPPA	REV__ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1959106326103	4	317.196994	1264.75887	-2.4472	-0.00077625	-1.1123	-0.00035283	-3.5595	-0.0011291	317.19654149507863	36.285	0.88987	36.285	36.142	37.032	0					123	64	3	0	0	0	0.8974	1	15411	15411		1.7423	0.52744	1	37022000	+		27380	11363	13501	13558	31421	31421					0.13708021382512925
QQRRRPVRVA	10	Unmodified	_QQRRRPVRVA_					0	0	0			REV__ENSG00000182752|ENST00000328252|PAPPA	REV__ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1958190798759	4	317.196994	1264.75887	-2.4154	-0.00076614	-0.63965	-0.0002029	-3.055	-0.00096904	317.1967445624548	37.21	0.65149	37.21	37.009	37.66	0					99	30	4	0	0	0	0.88031	1	15580	15580		3.5871	0.74377	1	32657000	+		27381	11363	13501	13558	31422	31422					0.13708021382512925
QQRRRRRRDP	10	Unmodified	_QQRRRRRRDP_					0	0	0		ENST00000508982.1_1_5:64859104-64863443:+|nuORF;ENSG00000113593|ENST00000261308|PPWD1	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.9615661501884	4	356.7108	1422.81409	0.011432	4.0779E-06	0.43318	0.00015452	0.44461	0.0001586	356.96175954541644	50.838	1.1277	52.232	51.74	52.868	1.3938					128	36	4	0	0	0	0.89803	1	21274	21274		1.5923	0.26264	1	29728000			27382	1830	13502	13559	31423	31423					0.11959827902978759
QQWFFRSEERR	11	Unmodified	_QQWFFRSEERR_					0	0	0		tr|A0A7D7AG77|A0A7D7AG77_9CLOTCysteinehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08045PE=3SV=1	tr|A0A7D7AG77|A0A7D7AG77_9CLOTCysteinehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08045PE=3SV=1	tr|A0A7D7AG77|A0A7D7AG77_9CLOTCysteinehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08045PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.9313842654228	3	523.595413	1567.76441	0.67217	0.00035194	0.66038	0.00034577	1.3325	0.00069771	523.5965676768519	12.035	0.2164	12.035	11.941	12.157	0					14	6	3	0	0	0	1.039	1	4995	4995		0.45452	0	1	965620			27383	17341	13503	13560	31424	31424					0.0032365538365866087
QQYNRGYM	8	Unmodified	_QQYNRGYM_					0	0	0			REV__nc|ENSG00000138669|Q13237-2|PRKG2	REV__nc|ENSG00000138669|Q13237-2|PRKG2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	353.2536193728447	3	353.827398	1058.46036	-1.1575	-0.00040954	-0.013778	-4.8752E-06	-1.1712	-0.00041441	353.8274854336501	67.132	0.27419	67.132	66.957	67.231	0					14	8	2	0	0	0	2.3239	1	27898	27898		0	0	1	636780	+		27384	10073	13504	13561	31425	31425					-0.0665281764518113
QQYYRYFELRP	11	Unmodified	_QQYYRYFELRP_					0	0	0			REV__ENSG00000112759|ENST00000371755|SLC29A1	REV__ENSG00000112759|ENST00000371755|SLC29A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1562.779223620892	1	1562.77504	1561.76776	2.7365	0.0042766	-0.71847	-0.0011228	2.018	0.0031537	1562.7744323733102	104.6	0.072876	104.76	104.71	104.79	0.16055					12	3	4	0	0	0	1.0405	1	44359	44359		0	0	1	57980000	+		27385	9368	13505	13562	31426	31426					0.009349054376343702
QRDFLQKL	8	Unmodified	_QRDFLQKL_					0	0	0		tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3032714724541	2	524.300916	1046.58728	2.3493	0.0012317	2.8025	0.0014694	5.1518	0.0027011	524.3032087695462	60.626	0.38126	60.954	60.759	61.14	0.32809					16	11	2	0	0	0	0.71791	1	25414	25414		28.487	5.3384	1	1915500			27386	16864	13506	13563	31427	31427					0.06584851571460604
QRDFLQKL	8	Unmodified	_QRDFLQKL_					0	0	0		tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	tr|A0A7D6VSB8|A0A7D6VSB8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15530PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	524.300916	1046.58728	2.3546	0.0012345	8.3416	0.0043735	10.696	0.005608	524.3062429568681	61.22	0.15741	61.22	61.078	61.236	0	0.13281	0.001419	NaN	28.487	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2036800			27387	16864	13506	13563							0.06584851571460604
QRDRKAEHWK	10	Unmodified	_QRDRKAEHWK_					0	0	0		nc|ENSG00000163346|Q96AQ6-3|PBXIP1;nc|ENSG00000163346|Q96AQ6-2|PBXIP1;ENSG00000163346|ENST00000368463|PBXIP1	nc|ENSG00000163346|Q96AQ6-3|PBXIP1	nc|ENSG00000163346|Q96AQ6-3|PBXIP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9090148806572	3	451.909331	1352.70617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.98	1	14.808	14.308	15.308	0.82789								0	0	0	0.66222	1	5798	5798		0.69767	0	1				27388	3671	13507	13564	31428	31428					0.04392018529028974
QREFIDTK	8	Unmodified	_QREFIDTK_					0	0	0			REV__tr|A0A553SI33|A0A553SI33_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=cydBPE=3SV=1	REV__tr|A0A553SI33|A0A553SI33_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=cydBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1846801638603	3	346.185579	1035.53491	-0.14756	-5.1082E-05	-1.3782	-0.00047713	-1.5258	-0.00052821	346.18510543246407	14.058	1.2162	14.171	13.667	14.883	0.11295					50	38	2	0	0	0	0.88031	1	5873	5873		8.7454	0.83525	1	814540	+		27389	14832	13508	13565	31429	31429					0.018562684378366612
QREWEQRDR	9	Unmodified	_QREWEQRDR_					0	0	0			REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8820373415947	3	434.881441	1301.62249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.564	1	15.333	14.833	15.833	0.76937								0	0	0	0.42693	1	6053	6053		0.86438	0	1		+		27390	10914	13509	13566	31430	31430					-0.016251376386890115
QRGLCKVKLHK	11	Unmodified	_QRGLCKVKLHK_					0	0	0		ENSG00000139865|ENST00000553443|TTC6;nc|ENSG00000139865|Q86TZ1-2|TTC6	ENSG00000139865|ENST00000553443|TTC6	ENSG00000139865|ENST00000553443|TTC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2023803591728	4	328.202588	1308.78124	0.20818	6.8325E-05	-1.88	-0.00061701	-1.6718	-0.00054869	328.20160328390904	35.134	0.40782	36.951	36.752	37.159	1.8176					91	35	3	0	0	0	1.0224	1	14661	14661		2.4348	0.35082	1	11663000			27391	2896	13510	13567	31431	31431					0.13920484735899663
QRGLQRFHLR	10	Unmodified	_QRGLQRFHLR_					0	0	0			REV__ENST00000537363.5_1_19:10664629-10670250:-|nuORF	REV__ENST00000537363.5_1_19:10664629-10670250:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	437.2570678591728	3	437.589933	1309.74797	1.701	0.00074433	-1.2252	-0.00053612	0.4758	0.00020821	437.58926138528875	32.804	0.24224	33.099	32.897	33.139	0.29431					10	7	2	0	0	0	0.12557	1	13716	13716		1.7423	0	1	755370	+		27392	9754	13511	13568	31432	31432					0.10548619008227433
QRGRVRRP	8	Unmodified	_QRGRVRRP_					0	0	0			REV__LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	REV__LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.2115661501884	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.343	1	19.537	19.037	20.037	0.19342								0	0	0	1.0178	1	8034	8034		1.6526	0	1		+		27393	13029	13512	13569	31433	31433					0.10536433711126847
QRGRVRRP	8	Unmodified	_QRGRVRRP_					0	0	0			REV__LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	REV__LAMA4|p.S4Gfs*26|1|0.35|ENSG00000112769|chr6:112254129-112254145|GCCAGGCTGAGCTCAAA/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2122070193291	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.702	1	19.681	19.181	20.181	0.97922								0	0	0	1.0178	1	7792	7792		1.6526	0	1		+		27394	13029	13512	13569	31434	31434					0.10536433711126847
QRGTASGGE	9	Unmodified	_QRGTASGGE_					0	0	0		nc|ENSG00000167216|Q8IYT4-2|KATNAL2;ENSG00000167216|ENST00000683218|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	nc|ENSG00000167216|Q8IYT4-2|KATNAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	862.4029418826103	1	862.401335	861.394058	2.3163	0.0019976	-0.85066	-0.00073361	1.4657	0.001264	862.4004520486098	77.777	0.49763	79.057	78.791	79.289	1.2809					40	15	3	0	0	0	0.42305	1	32630	32630		19.257	19.257	1	6444100			27395	3958	13513	13570	31435	31435					-0.0421831021556045
QRHGHQREYVK	11	Unmodified	_QRHGHQREYVK_					0	0	0			REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.1905700564384	4	360.191908	1436.73853	-0.30006	-0.00010808	-1.9193	-0.0006913	-2.2193	-0.00079938	360.1908217085883	12.009	0.08917	12.797	12.724	12.813	0.78751					6	2	3	0	0	0	0.90077	1	4983	4983		9.7643	7.3295	1	1302300	+		27396	13048	13514	13571	31436	31436					0.037628059320240936
QRHGHQREYVK	11	Unmodified	_QRHGHQREYVK_					0	0	0			REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	REV__ENST00000435941.1_1_X:122250823-122251621:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	360.191908	1436.73853	-0.30006	-0.00010808	-1.9193	-0.0006913	-2.2193	-0.00079938	360.1908217085883	12.009	0.08917	12.797	12.724	12.813	0.78751	-0.020041	-0.0018136	NaN	9.7643	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1302300	+		27397	13048	13514	13571							0.037628059320240936
QRKKVHQLK	9	Unmodified	_QRKKVHQLK_					0	0	0		ENSG00000112739|ENST00000337659|PRPF4B;ENST00000463634.6_1_6:4056876-4060847:+|nuORF	ENSG00000112739|ENST00000337659|PRPF4B	ENSG00000112739|ENST00000337659|PRPF4B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1538879275322	3	388.915646	1163.72511	0.4731	0.000184	1.3773	0.00053567	1.8504	0.00071966	388.91555462507796	89.93	0.85634	89.93	89.431	90.288	0					53	26	3	0	0	0	0.11954	1	37618	37618		0.26902	0	1	1399500			27398	1794	13515	13572	31437	31437					0.14979599890739337
QRKLPLCPLL	10	Unmodified	_QRKLPLCPLL_					0	0	0		ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2481262087822	3	394.246005	1179.71618	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.423	1	90.827	90.327	91.327	1.4045								0	0	0	0.66218	1	37677	37677		0.77653	0.078866	1				27399	5544	13516	13573	31438	31438					0.1335149021003872
QRKNRQHLKRR	11	Unmodified	_QRKNRQHLKRR_					0	0	0			REV__ENST00000459737.5_1_14:56079280-56084690:+|nuORF	REV__ENST00000459737.5_1_14:56079280-56084690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3114196658134	3	507.309941	1518.90799	2.4462	0.001241	0.73625	0.00037351	3.1825	0.0016145	507.31038140851825	90.796	1.1557	90.796	90.032	91.188	0					80	36	3	0	0	0	1.0402	1	37778	37778		0.094841	0	1	2075400	+		27400	13181	13517	13574	31439	31439					0.16929547005224777
QRKNRQHLKRR	11	Unmodified	_QRKNRQHLKRR_					0	0	0			REV__ENST00000459737.5_1_14:56079280-56084690:+|nuORF	REV__ENST00000459737.5_1_14:56079280-56084690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3112060427666	3	507.309941	1518.90799	2.9411	0.0014921	-0.10886	-5.5228E-05	2.8323	0.0014368	507.3097086678315	91.464	0.71117	91.654	91.173	91.885	0.19042					33	21	2	0	0	0	1.0405	1	38279	38279		0	0	1	699830	+		27401	13181	13517	13574	31440	31440					0.16929547005224777
QRKRDPDT	8	Unmodified	_QRKRDPDT_					0	0	0		ENST00000493335.5_1_22:31489433-31491914:+|nuORF	ENST00000493335.5_1_22:31489433-31491914:+|nuORF	ENST00000493335.5_1_22:31489433-31491914:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.1814758181572	3	339.180828	1014.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.6	1	101.67	101.17	102.17	0.067009								0	0	0	1.0178	1	42541	42541		1.6526	0	1				27402	6925	13518	13575	31441	31441					0.01397616009558078
QRLKKKWLF	9	Unmodified	_QRLKKKWLF_					0	0	0			REV__ENST00000545213.5_1_14:24789074-24794639:-|nuORF	REV__ENST00000545213.5_1_14:24789074-24794639:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2657043337822	3	416.264276	1245.771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.9	1	101.9	101.4	102.4	0								0	0	0	0.42693	1	42674	42674		0.23584	0	1		+		27403	8085	13519	13576	31442	31442					0.15794245072970625
QRLLKILRAAR	11	Unmodified	_QRLLKILRAAR_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B;REV__ENSG00000198216|ENST00000367573|CACNA1E	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1337.887744128704	1	1337.8852	1336.87792	2.1008	0.0028107	-0.7589	-0.0010153	1.3419	0.0017953	1337.88303603024	107.96	0.084854	108.11	108.06	108.15	0.15796					13	9	2	0	0	0	1.0395	1	46517	46517		0.30703	0	1	27893000	+		27404	10346;11704	13520	13577	31443	31443					0.22295795287368492
QRLLLGVFHL	10	Unmodified	_QRLLLGVFHL_					0	0	0		ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	ENST00000331569.5_1_8:37554703-37555105:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2499877810478	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.928	1	45.928	45.428	46.428	0								0	0	0	0.66141	1	19211	19211		2.086	0	1				27405	5894	13521	13578	31444	31444					0.13413965802010352
QRLQHLVAR	9	Unmodified	_QRLQHLVAR_					0	0	0			REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF	REV__ENST00000594977.5_1_19:8612968-8642307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.8435546755791	2	560.838531	1119.66251	2.6321	0.0014762	-0.85717	-0.00048073	1.7749	0.00099546	560.8378614833828	95.884	0.26116	96.005	95.912	96.173	0.1214					19	8	3	0	0	0	0.85019	1	40177	40177		0.52476	0	1	2884700	+		27406	14090	13522	13579	31445	31445					0.10746453822525837
QRMELRQRRRR	11	Unmodified	_QRMELRQRRRR_					0	0	0		ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	528.9733764529228	3	528.974452	1583.90153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.193	1	18.366	17.866	18.866	0.17285								0	0	0	0.63775	1	7551	7551		0.08335	0	1				27407	5499	13523	13580	31446	31446					0.13293285782219755
QRMELRQRRRR	11	Unmodified	_QRMELRQRRRR_					0	0	0		ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	ENST00000055682.10_1_X:74144856-74145033:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	528.9741088747978	3	528.974452	1583.90153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.215	1	16.112	15.612	16.612	0.89664								0	0	0	0.63775	1	6312	6312		0.08335	0	1				27408	5499	13523	13580	31447	31447					0.13293285782219755
QRNFTNESF	9	Unmodified	_QRNFTNESF_					0	0	0			REV__ENST00000493688.5_1_20:56826891-56884481:-|nuORF	REV__ENST00000493688.5_1_20:56826891-56884481:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5140563845634	3	381.512355	1141.51524	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.964	1	65.964	65.464	66.464	0								0	0	0	0.42693	1	27485	27485		2.086	0.34373	1		+		27409	12129	13524	13581	31448	31448					-0.04986107572926812
QRNKPLTLII	10	Unmodified	_QRNKPLTLII_					0	0	0			REV__DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	REV__DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	400.0457336306572	3	399.255557	1194.74484	0.9675	0.00038628	2.7701	0.001106	3.7376	0.0014923	399.2557074819135	25.5	0.49282	25.752	25.52	26.013	0.25197					24	15	3	0	0	0	0.12561	1	10635	10635		0.15932	0.01943	1	1718800	+		27410	8434	13525	13582	31449	31449					0.15525931110846614
QRNYQFDFL	9	Unmodified	_QRNYQFDFL_					0	0	0		nc|ENSG00000099995|Q15459-2|SF3A1;ENSG00000099995|ENST00000215793|SF3A1	nc|ENSG00000099995|Q15459-2|SF3A1	nc|ENSG00000099995|Q15459-2|SF3A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	615.7992431521416	2	615.798737	1229.58292	1.9701	0.0012132	0.29975	0.00018459	2.2698	0.0013978	615.798438169449	77.06	1.4499	77.376	76.689	78.138	0.31653					74	45	3	0	0	0	0.84195	1	32154	32154		1.6526	0	1	1092600			27411	1226	13526	13583	31450	31450					-0.022686576420937854
QRPKLRRQ	8	Unmodified	_QRPKLRRQ_					0	0	0		SCYL1-FRMD8|1|fusion;nc|ENSG00000126391|Q9BZ67-2|FRMD8;nc|ENSG00000126391|Q9BZ67-3|FRMD8;ENSG00000126391|ENST00000317568|FRMD8;SCYL1-FRMD8|2|fusion;ENST00000440433.1_1_X:64770780-64771062:-|nuORF	SCYL1-FRMD8|1|fusion	SCYL1-FRMD8|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3395873904228	2	541.338698	1080.66284	2.0005	0.0010829	-0.54372	-0.00029433	1.4568	0.0007886	541.33828660629	80.926	1.1083	81.217	80.655	81.763	0.29056					79	35	3	0	0	0	0.89178	1	33818	33818		0.69038	0	1	2735700			27412	2306	13527	13584	31451	31451					0.12573873542419278
QRQDMSGSHH	10	Unmodified	_QRQDMSGSHH_					0	0	0			REV__ENST00000461445.5_1_3:38051483-38071030:-|nuORF	REV__ENST00000461445.5_1_3:38051483-38071030:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.8412658572197	3	394.840477	1181.4996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.81	1	11.81	11.31	12.31	0								0	0	0	0.65227	1	4883	4883		12.175	0	1		+		27413	11525	13528	13585	31452	31452					-0.083887173615949
QRQDMSGSHH	10	Unmodified	_QRQDMSGSHH_					0	0	0			REV__ENST00000461445.5_1_3:38051483-38071030:-|nuORF	REV__ENST00000461445.5_1_3:38051483-38071030:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.1752197146416	3	394.840477	1181.4996	-0.85051	-0.00033582	1.6643	0.00065714	0.81381	0.00032132	394.8410850244641	11.666	0.96844	12.36	11.759	12.727	0.69396					69	30	3	0	0	0	0.85995	1	4756	4756		5.7834	0.88642	1	2174000	+		27414	11525	13528	13585	31453	31453					-0.083887173615949
QRQLLYKHFD	10	Unmodified	_QRQLLYKHFD_					0	0	0		CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	CON__ENSEMBL:ENSBTAP00000024146	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9118530154228	3	449.910449	1346.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4498	1	6.0711	5.5711	6.5711	0.62127								0	0	0	0.66255	1	2250	2250		0.13989	0	1			+	27415	329	13529	13586	31454	31454					0.050032685830274204
QRQRAKRNAVL	11	Unmodified	_QRQRAKRNAVL_					0	0	0		ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	ENSG00000134780|ENST00000257215|DAGLA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	447.2719909548759	3	447.272493	1338.79565	3.2382	0.0014484	-0.95482	-0.00042706	2.2834	0.0010213	447.2716052968581	96.665	0.21385	96.77	96.664	96.878	0.105					19	6	4	0	0	0	1.0362	1	40429	40429		1.3296	0.11481	1	26588000			27416	2636	13530	13587	31455	31455					0.13980273208426297
QRQREPTT	8	Unmodified	_QRQREPTT_					0	0	0			REV__BDP1|p.P2435R|1|0.07|ENSG00000145734|chr5:71560045-71560045|C/G|missense_variant	REV__BDP1|p.P2435R|1|0.07|ENSG00000145734|chr5:71560045-71560045|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.1797973513603	3	339.180828	1014.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.79	1	101.86	101.36	102.36	0.067009								0	0	0	1.0178	1	42618	42618		0.40072	0	1		+		27417	8164	13531	13588	31456	31456					0.01397616009558078
QRRAHRLI	8	Unmodified	_QRRAHRLI_					0	0	0			REV__nc|ENSG00000096070|Q9ULD4-3|BRPF3	REV__nc|ENSG00000096070|Q9ULD4-3|BRPF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3277465701103	2	525.325591	1048.63663	2.8271	0.0014852	-1.581	-0.00083052	1.2462	0.00065464	525.3246864757799	91.773	0.38869	91.963	91.755	92.144	0.19041					28	11	3	0	0	0	0.89176	1	38402	38402		0.79363	0	1	1688600	+		27418	8937	13532	13589	31457	31457					0.11425604370924702
QRRCLAPPL	9	Unmodified	_QRRCLAPPL_					0	0	0			REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3046752810478	2	527.302936	1052.59132	2.4611	0.0012977	1.6832	0.00088757	4.1443	0.0021853	527.3037696357269	83.984	0.4305	83.984	83.721	84.151	0					32	13	3	0	0	0	0.83213	1	34987	34987		2.0598	0.21551	1	8047200	+		27419	13090	13533	13590	31458	31458					0.06712617793527897
QRRCLAPPL	9	Unmodified	_QRRCLAPPL_					0	0	0			REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.3053466677666	2	527.302936	1052.59132	2.7389	0.0014442	3.3349	0.0017585	6.0738	0.0032027	527.3044525582318	82.961	0.4298	84.173	83.951	84.381	1.2125					32	13	3	0	0	0	0.76456	1	34875	34875		4.756	0.42677	1	2894700	+		27420	13090	13533	13590	31459	31459					0.06712617793527897
QRREFREKRLR	11	Unmodified	_QRREFREKRLR_					0	0	0		nc|ENSG00000104859|Q8N2M8-3|CLASRP;nc|ENSG00000104859|Q8N2M8-4|CLASRP;ENSG00000104859|ENST00000221455|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3107787966728	3	525.309718	1572.90732	2.0095	0.0010556	0.44142	0.00023188	2.4509	0.0012875	525.3097066719147	94.009	0.71791	94.009	93.678	94.396	0					49	22	3	0	0	0	1.0402	3	39194	39194;39258;39325		0.08335	0	1	2242000			27421	1483	13534	13591	31460;31461;31462	31460					0.14378707565538207
QRRGLTVLPR	10	Unmodified	_QRRGLTVLPR_					0	0	0		ENST00000535296.5_1_11:62623694-62639117:+|nuORF	ENST00000535296.5_1_11:62623694-62639117:+|nuORF	ENST00000535296.5_1_11:62623694-62639117:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2487975955009	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.261	1	43.601	43.101	44.101	1.3399								0	0	0	0.66161	1	17718	17718		1.7423	0	1				27422	7196	13535	13592	31463	31463					0.14134698402403956
QRRGLTVLPR	10	Unmodified	_QRRGLTVLPR_					0	0	0		ENST00000535296.5_1_11:62623694-62639117:+|nuORF	ENST00000535296.5_1_11:62623694-62639117:+|nuORF	ENST00000535296.5_1_11:62623694-62639117:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2504150271416	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.428	1	43.768	43.268	44.268	1.3399								0	0	0	0.66161	1	17785	17785		1.7423	0.41263	1				27423	7196	13535	13592	31464	31464					0.14134698402403956
QRRKITIVKR	10	Unmodified	_QRRKITIVKR_					0	0	0		tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	tr|A0A7D6ZX05|A0A7D6ZX05_9CLOTtRNA5-hydroxyuridinemethyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmRPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.4326660037041	2	649.430587	1296.84662	2.8417	0.0018455	0.69968	0.00045439	3.5414	0.0022999	649.4309467717628	107.34	0.20778	107.5	107.38	107.58	0.15781					37	10	5	0	0	0	0.89803	1	46186	46186		0.40072	0	1	414270000			27424	17182	13536	13593	31465	31465					0.21007222253251712
QRRKNKRIRRK	11	Unmodified	_QRRKNKRIRRK_					0	0	0		ENST00000529593.1_1_8:146277868-146278266:+|nuORF;ENST00000331434.6_1_8:146277984-146278266:+|nuORF	ENST00000529593.1_1_8:146277868-146278266:+|nuORF	ENST00000529593.1_1_8:146277868-146278266:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1530029177666	4	385.503921	1537.98658	-0.11927	-4.5979E-05	-2.1507	-0.00082912	-2.27	-0.0008751	385.50340039732095	76.383	0.11884	76.383	76.316	76.435	0					5	3	2	0	0	0	0.14606	1	31792	31792		0	0	1	624190			27425	5893	13537	13594	31466	31466					0.23910399310307184
QRRKNKRIRRK	11	Unmodified	_QRRKNKRIRRK_					0	0	0		ENST00000529593.1_1_8:146277868-146278266:+|nuORF;ENST00000331434.6_1_8:146277984-146278266:+|nuORF	ENST00000529593.1_1_8:146277868-146278266:+|nuORF	ENST00000529593.1_1_8:146277868-146278266:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1543151736259	4	385.503921	1537.98658	1.6815	0.00064822	-1.7347	-0.00066873	-0.053182	-2.0502E-05	385.50347939787554	72.247	0.18866	73.576	73.423	73.612	1.3297					6	5	2	0	0	0	0.14606	1	30330	30330		0	0	1	332820			27426	5893	13537	13594	31467	31467					0.23910399310307184
QRRQNNRLKP	10	Unmodified	_QRRQNNRLKP_					0	0	0		ENST00000408005.2_1_7:11415423-11419358:-|nuORF;ENSG00000005108|ENST00000423059|THSD7A	ENST00000408005.2_1_7:11415423-11419358:-|nuORF	ENST00000408005.2_1_7:11415423-11419358:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	437.2771484255791	3	437.256843	1308.7487	2.8317	0.0012382	1.0362	0.0004531	3.8679	0.0016913	437.2571912072493	80.173	0.67706	81.424	81.293	81.971	1.2512					25	21	2	0	0	0	0.12559	1	33731	33731		0.77653	0	1	723310			27427	480	13538	13595	31468	31468					0.10667413657256475
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3835937380791	2	628.38196	1254.74937	2.0785	0.0013061	1.0343	0.00064995	3.1129	0.0019561	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.83753	2	33030	33030;33079		1.8442	0	1	6184900	+		27428	10265	13539	13596	31469;31470	31469					0.1321825309698852
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3831054568291	2	628.38196	1254.74937	1.5916	0.0010001	0.30985	0.00019471	1.9014	0.0011948	628.3820972907522	78.873	0.64691	79.182	78.641	79.288	0.30933					37	20	2	0	0	0	0.83753	2	32908	32908;32959		1.8442	0	1	5235200	+		27429	10265	13539	13596	31471;31472	31471					0.1321825309698852
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3835937380791	2	628.38196	1254.74937	1.7095	0.0010742	2.0667	0.0012987	3.7762	0.0023729	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.83753	2	33153	33153;33202		1.8442	0	1	7710600	+		27430	10265	13539	13596	31473;31474	31473					0.1321825309698852
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3842040896416	2	628.38196	1254.74937	2.3591	0.0014824	1.0037	0.00063074	3.3628	0.0021131	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.83753	1	32868	32868		1.8442	0	1	7119900	+		27431	10265	13539	13596	31475	31475					0.1321825309698852
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3851196169853	2	628.38196	1254.74937	1.2793	0.0008039	1.6842	0.0010583	2.9635	0.0018622	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.83753	1	32818	32818		1.8442	0	1	6175000	+		27432	10265	13539	13596	31476	31476					0.1321825309698852
QRRRKRERA	9	Unmodified	_QRRRKRERA_					0	0	0			REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	REV__nc|ENSG00000145014|Q2T9K0-4|TMEM44	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	628.38196	1254.74937	2.188	0.0013749	-1.9841	-0.0012468	0.20397	0.00012817	628.3798991139969	77.699	0.15855	78.98	78.856	79.015	1.2809	-0.22404	-0.0034532	NaN	1.8442	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593730	+		27433	10265	13539	13596							0.1321825309698852
QRRRRKLRRPT	11	Unmodified	_QRRRRKLRRPT_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.3271057009697	3	508.325702	1521.95528	1.6139	0.00082038	-0.24725	-0.00012569	1.3666	0.0006947	508.3252661739283	98.012	0.11679	98.012	97.939	98.056	0					10	4	3	0	0	0	1.0393	1	40976	40976		0.36667	0.28332	1	27162000	+		27434	12409	13540	13597	31477	31477					0.21517826276249252
QRRRRLLIKK	10	Unmodified	_QRRRRLLIKK_					0	0	0		ENSG00000124302|ENST00000650847|CHST8;EPT1-CHST8|1|fusion	ENSG00000124302|ENST00000650847|CHST8	ENSG00000124302|ENST00000650847|CHST8	MSMS	GG20161007_CRH_Patient100_A02_01	1	683.9633056521416	2	683.965129	1365.9157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.388	1	31.388	30.888	31.888	0								0	0	0	0.66166	1	13153	13153		1.6526	0.32309	1				27435	2224	13541	13598	31478	31478					0.2473830627282041
QRRRRRRKIEI	11	Unmodified	_QRRRRRRKIEI_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.0026122927666	3	523.001107	1565.98149	1.5667	0.0008194	-0.61442	-0.00032134	0.9523	0.00049806	523.0012069260137	98.282	0.10012	98.282	98.223	98.323	0					8	3	3	0	0	0	1.0369	1	41099	41099		1.1098	0.96986	1	21422000			27436	153	13542	13599	31479	31479					0.22114095447727777
QRRRRRRKIEI	11	Unmodified	_QRRRRRRKIEI_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.0033447146416	3	523.001107	1565.98149	3.7028	0.0019365	0.17277	9.0358E-05	3.8755	0.0020269	523.0014080057525	98.136	0.088966	98.364	98.32	98.409	0.22776					6	3	2	0	0	0	1.0402	1	41308	41308		0.08335	0	1	9890400			27437	153	13542	13599	31480	31480					0.22114095447727777
QRRRRRRKIEI	11	Unmodified	_QRRRRRRKIEI_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	523.001107	1565.98149	2.9112	0.0015225	-2.8486	-0.0014898	0.062596	3.2738E-05	522.9992299978262	98.263	0.083809	98.354	98.286	98.37	0.090881	0.024745	-0.0044972	NaN	1.1098	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5849400			27438	153	13542	13599							0.22114095447727777
QRRRRRRKIEI	11	Unmodified	_QRRRRRRKIEI_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	523.001107	1565.98149	3.2142	0.001681	1.2428	0.00065001	4.4571	0.002331	523.0019681653706	98.062	0.083359	98.318	98.276	98.359	0.25636	-0.011435	0.0019222	NaN	1.1098	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4682200			27439	153	13542	13599							0.22114095447727777
QRRRRRRRRWG	11	Unmodified	_QRRRRRRRRWG_					0	0	0			REV__nc|ENSG00000149177|Q12913-3|PTPRJ	REV__nc|ENSG00000149177|Q12913-3|PTPRJ	MSMS	GG20161007_CRH_Patient100_A02_02	2	819.9298583865166	2	819.99668	1637.97881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.394	1	95.518	95.018	96.018	0.12331								0	0	0	0.63775	1	39919	39919		0	0	1		+		27440	14460	13543	13600	31481	31481					0.18533684833414554
QRRWSRSSCH	10	Unmodified	_QRRWSRSSCH_					0	0	0			REV__ENST00000296255.7_1_3:128369549-128369666:-|nuORF	REV__ENST00000296255.7_1_3:128369549-128369666:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8821594119072	3	434.879266	1301.61597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.28	1	111.32	110.82	111.82	0.047043								0	0	0	0.66254	1	47981	47981		0.15932	0.064481	1		+		27441	12293	13544	13601	31482	31482					-0.022773540710204543
QRTVILHLR	9	Unmodified	_QRTVILHLR_					0	0	0			REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1	REV__nc|ENSG00000164199|Q8WXG9-2|ADGRV1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	378.5786010622978	3	379.24013	1134.69856	-0.73139	-0.00027737	-0.41219	-0.00015632	-1.1436	-0.00043369	379.5737306032855	32.909	0.18894	32.909	32.782	32.971	0					8	5	2	0	0	0	0.11948	1	13761	13761		0.77653	0	1	795270	+		27442	8090	13545	13602	31483	31483					0.13659910999399472
QRVWDWWHRRR	11	Unmodified	_QRVWDWWHRRR_					0	0	0		ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.2974120974541	3	560.962541	1679.86579	1.7097	0.00095908	-1.7712	-0.00099357	-0.06148	-3.4488E-05	560.9612760347592	42.368	0.33705	42.689	42.543	42.88	0.32058					16	10	2	0	0	0	1.0405	1	17789	17789		0	0	1	988480			27443	7444	13546	13603	31484	31484					0.05305571596841219
QRVWDWWHRRR	11	Unmodified	_QRVWDWWHRRR_					0	0	0		ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2954589724541	3	560.962541	1679.86579	2.0743	0.0011636	-2.0106	-0.0011278	0.063765	3.577E-05	561.2957048846039	40.44	0.25107	42.303	42.171	42.422	1.8624					15	7	3	0	0	0	1.0405	1	16941	16941		0	0	1	990640			27444	7444	13546	13603	31485	31485					0.05305571596841219
QRVWDWWHRRR	11	Unmodified	_QRVWDWWHRRR_					0	0	0		ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	560.962541	1679.86579	1.3261	0.00074389	-2.3875	-0.0013393	-1.0614	-0.00059542	560.9614933789414	42.761	0.30743	42.761	42.541	42.849	0	0.035937	-0.00079607	NaN	0	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	841620			27445	7444	13546	13603							0.05305571596841219
QRVWDWWHRRR	11	Unmodified	_QRVWDWWHRRR_					0	0	0		ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	ENST00000583780.1_2_17:18263786-18266854:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	560.962541	1679.86579	2.3749	0.0013322	-4.7897	-0.0026869	-2.4149	-0.0013546	560.9606025573596	40.648	0.37578	41.972	41.77	42.146	1.3245	-0.16524	-0.001152	NaN	0	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	865070			27446	7444	13546	13603							0.05305571596841219
QRWHKLLWRLK	11	Unmodified	_QRWHKLLWRLK_					0	0	0			REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	782.9696533083916	2	782.472786	1562.93102	2.1508	0.0016829	-2.5765	-0.002016	-0.42569	-0.00033309	782.9717370982934	85.466	0.33117	86.592	86.46	86.792	1.1265					20	13	2	0	0	0	1.0366	1	35898	35898		1.1933	0.92432	1	12273000	+		27447	10914	13547	13604	31486	31486					0.1720717307000541
QRWHKLLWRLK	11	Unmodified	_QRWHKLLWRLK_					0	0	0			REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	782.472786	1562.93102	2.1508	0.0016829	-2.5765	-0.002016	-0.42569	-0.00033309	782.9717370982934	85.466	0.33117	86.592	86.46	86.792	1.1265	-0.014252	0.00013277	NaN	1.1933	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12273000	+		27448	10914	13547	13604							0.1720717307000541
QRWHKLLWRLK	11	Unmodified	_QRWHKLLWRLK_					0	0	0			REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	REV__nc|ENSG00000168502|Q9Y4B5-4|MTCL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	782.472786	1562.93102	2.506	0.0019608	-2.8341	-0.0022176	-0.32812	-0.00025675	782.4707872948995	85.024	0.21236	86.621	86.514	86.727	1.5962	0.014252	-0.0002704	NaN	1.1933	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9056200	+		27449	10914	13547	13604							0.1720717307000541
QRWHLHPYPG	10	Unmodified	_QRWHLHPYPG_					0	0	0		ENST00000339861.8_3_9:92017874-92020319:-|nuORF	ENST00000339861.8_3_9:92017874-92020319:-|nuORF	ENST00000339861.8_3_9:92017874-92020319:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.365	1	11.11	10.61	11.61	0.74462								0	0	0	0.66254	1	4311	4311		0.15932	0	1				27450	5928	13548	13605	31487	31487					0.00853863442898728
QRWRKLFWRLK	11	Unmodified	_QRWRKLFWRLK_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	809.2130615115166	2	808.986061	1615.95757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.47	1	99.667	99.167	100.17	0.19767								0	0	0	0.63775	1	41874	41874		0	0	1		+		27451	8155	13549	13606	31488	31488					0.17422861961335911
QRWRKLFWRLK	11	Unmodified	_QRWRKLFWRLK_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	808.9857665896416	2	808.986061	1615.95757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.887	1	96.075	95.575	96.575	1.1887								0	0	0	0.63775	1	39921	39921		0	0	1		+		27452	8155	13549	13606	31489	31489					0.17422861961335911
QRWSNPWLWQW	11	Unmodified	_QRWSNPWLWQW_					0	0	0			REV__ENST00000442326.1_1_2:70321210-70322104:-|nuORF	REV__ENST00000442326.1_1_2:70321210-70322104:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	793.8899413943291	2	793.88621	1585.75787	2.8724	0.0022803	-0.916	-0.0007272	1.9564	0.0015531	793.8851751892096	72.85	1.1237	74.179	73.792	74.915	1.3297					80	35	3	0	0	0	0.97491	1	30576	30576		5.2969	1.7004	1	24273000	+		27453	13092	13550	13607	31490	31490					-0.011582377770764651
QRWSNPWLWQW	11	Unmodified	_QRWSNPWLWQW_					0	0	0			REV__ENST00000442326.1_1_2:70321210-70322104:-|nuORF	REV__ENST00000442326.1_1_2:70321210-70322104:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	793.8714477419853	2	793.88621	1585.75787	2.3283	0.0018484	-1.8615	-0.0014778	0.46679	0.00037058	793.8844675846522	72.311	1.5002	74.121	73.831	75.331	1.8101					94	47	3	0	0	0	0.97491	1	30519	30519		5.2969	1.7004	1	23761000	+		27454	13092	13550	13607	31491	31491					-0.011582377770764651
QSFLVRPKRRQ	11	Unmodified	_QSFLVRPKRRQ_					0	0	0			REV__ENSG00000180053|ENST00000325017|NKX2-6	REV__ENSG00000180053|ENST00000325017|NKX2-6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	708.4241821169853	2	707.923126	1413.8317	2.7264	0.0019301	-1.2399	-0.00087776	1.4865	0.0010523	707.9222893093821	87.881	0.72318	87.881	87.701	88.424	0					39	23	2	0	0	0	1.0395	1	36736	36736		0.30703	0	1	1142700	+		27455	11288	13551	13608	31492	31492					0.14133730385242416
QSFLVVLKF	9	Unmodified	_QSFLVVLKF_					0	0	0			REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	REV__nc|ENSG00000166960|Q5BJE1-3|CCDC178	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.2838622927666	2	540.826235	1079.63792	3.1725	0.0017158	0.15794	8.5419E-05	3.3304	0.0018012	540.8264308792152	74.805	0.25245	76.112	76.028	76.28	1.3063					10	7	2	0	0	0	0.11071	1	31462	31462		10.824	0	1	420540	+		27456	10851	13552	13609	31493	31493					0.10128380896458111
QSFSKGCEECK	11	Unmodified	_QSFSKGCEECK_					0	0	0			REV__ENSG00000213096|ENST00000357002|ZNF254	REV__ENSG00000213096|ENST00000357002|ZNF254	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.8453857302666	3	415.846129	1244.51656	-0.57009	-0.00023707	-0.98809	-0.00041089	-1.5582	-0.00064796	415.84578046527645	13.005	0.58521	13.005	12.715	13.301	0					41	18	4	0	0	0	0.98969	2	5380	5380;5431		4.4062	0.52982	1	2769900	+		27457	11834	13553	13610	31494;31495	31494					-0.09591977590662282
QSGDWGDQYS	10	Unmodified	_QSGDWGDQYS_					0	0	0		nc|ENSG00000143643|Q8NBP0-2|TTC13;ENSG00000143643|ENST00000366661|TTC13;TTC13|p.T353Sfs*20|1|0.13|ENSG00000143643|chr1:230931803-230931804|-/C|frameshift_variant	nc|ENSG00000143643|Q8NBP0-2|TTC13	nc|ENSG00000143643|Q8NBP0-2|TTC13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	571.2950317263603	2	571.722892	1141.43123	2.4997	0.0014292	-1.0075	-0.00057599	1.4923	0.00085317	572.22567511619	76.064	0.14629	77.357	77.311	77.458	1.2938					7	4	2	0	0	0	0.12488	1	31911	31911		8.1555	2.9249	1	320010			27458	3046	13554	13611	31496	31496					-0.1338268346046334
QSGLSLLLS	9	Unmodified	_QSGLSLLLS_					0	0	0			REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	917.5291015505791	1	917.530224	916.522947	1.228	0.0011267	-1.6233	-0.0014894	-0.39529	-0.00036269	917.5282637726733	54.716	0.22546	56.684	56.583	56.809	1.9684					12	7	2	0	0	0	0.037098	1	22950	22950		78.728	3.799	1	1132900	+		27459	12207	13555	13612	31497	31497					0.06134651694674176
QSGLSLLLS	9	Unmodified	_QSGLSLLLS_					0	0	0			REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	917.530224	916.522947	1.2892	0.0011829	-0.094315	-8.6537E-05	1.1949	0.0010964	917.5300032831836	55.221	0.22793	56.631	56.504	56.732	1.4099	-0.026566	0.00064803	NaN	78.728	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1904700	+		27460	12207	13555	13612							0.06134651694674176
QSGLSLLLS	9	Unmodified	_QSGLSLLLS_					0	0	0			REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	REV__ENST00000263980.7_1_1:27480949-27481393:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	917.530224	916.522947	1.228	0.0011267	-1.6233	-0.0014894	-0.39529	-0.00036269	917.5282637726733	54.716	0.22546	56.684	56.583	56.809	1.9684	0.026566	-0.00075483	NaN	78.728	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1132900	+		27461	12207	13555	13612							0.06134651694674176
QSKGWQSPKQ	10	Unmodified	_QSKGWQSPKQ_					0	0	0		nc|ENSG00000166928|Q96JA4-2|MS4A14;ENSG00000166928|ENST00000300187|MS4A14;nc|ENSG00000166928|Q96JA4-5|MS4A14	nc|ENSG00000166928|Q96JA4-2|MS4A14	nc|ENSG00000166928|Q96JA4-2|MS4A14	MSMS	GG20161007_CRH_Patient100_W632_01	3	587.3029662966728	2	587.304187	1172.59382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	104.03	103.53	104.53	0.16055								0	0	0	0.65926	1	43893	43893		5.7319	3.4291	1				27462	3936	13556	13613	31498	31498					0.014427447321850195
QSKPPRRRRRR	11	Unmodified	_QSKPPRRRRRR_					0	0	0		ENST00000254998.2_1_20:23331374-23334728:+|nuORF	ENST00000254998.2_1_20:23331374-23334728:+|nuORF	ENST00000254998.2_1_20:23331374-23334728:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.3113281130791	3	498.310052	1491.90833	2.2029	0.0010977	0.45615	0.00022731	2.6591	0.001325	498.3100895632981	88.952	0.76305	88.952	88.701	89.464	0					38	23	2	0	0	0	1.0402	1	37203	37203		0.094841	0	1	1352500			27463	5595	13557	13614	31499	31499					0.18204966725102167
QSKQLRLA	8	Unmodified	_QSKQLRLA_					0	0	0			REV__ENSG00000099812|ENST00000215582|MISP	REV__ENSG00000099812|ENST00000215582|MISP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2885009646416	2	472.287808	942.561064	1.5772	0.0007449	-0.45862	-0.0002166	1.1186	0.0005283	472.28749819848395	77.575	0.89394	79.327	78.977	79.871	1.7514					71	28	4	0	0	0	0.88587	3	32603	32511;32550;32603		5.2307	0	1	106420000	+		27464	8954	13558	13615	31500;31501;31502	31502					0.08748582399971383
QSKRAERLRRV	11	Unmodified	_QSKRAERLRRV_					0	0	0			REV__CARD10|p.L290Hfs*29|1|0.27|ENSG00000100065|chr22:37510245-37510254|CGCCGTCAGC/-|frameshift_variant	REV__CARD10|p.L290Hfs*29|1|0.27|ENSG00000100065|chr22:37510245-37510254|CGCCGTCAGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.9532043337822	3	466.951531	1397.83276	3.4091	0.0015919	0.72617	0.00033908	4.1352	0.001931	466.95149845557626	96.469	0.28549	96.574	96.319	96.604	0.105					13	8	2	0	0	0	1.0388	1	40332	40332		0.50596	0.051438	1	1182400	+		27465	8177	13559	13616	31503	31503					0.14975944754132797
QSLGHRRR	8	Unmodified	_QSLGHRRR_					0	0	0		ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.2928344607353	2	505.291748	1008.56894	2.4269	0.0012263	-2.077	-0.0010495	0.34982	0.00017676	505.29025902812424	81.37	0.57845	81.661	81.307	81.885	0.29056					43	18	3	0	0	0	0.89051	1	33965	33965		2.3027	0	1	8788400			27466	5710	13560	13617	31504	31504					0.06500154440118422
QSLGHRRR	8	Unmodified	_QSLGHRRR_					0	0	0		ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	ENST00000283921.4_1_7:27211779-27213458:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2910339236259	2	505.291748	1008.56894	1.0593	0.00053526	0.34548	0.00017457	1.4048	0.00070983	505.2918588948279	80.232	0.44868	81.948	81.663	82.111	1.7167					35	14	3	0	0	0	0.8873	1	33651	33651		4.3292	0	1	3645900			27467	5710	13560	13617	31505	31505					0.06500154440118422
QSLIIILYK	9	Unmodified	_QSLIIILYK_					0	0	0		ENST00000539493.2_1_2:135848616-135848697:+|nuORF	ENST00000539493.2_1_2:135848616-135848697:+|nuORF	ENST00000539493.2_1_2:135848616-135848697:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2329284548759	3	364.23387	1089.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.59	1	69.912	69.412	70.412	0.32224								0	0	0	0.42693	1	29127	29127		1.0715	0	1				27468	7209	13561	13618	31506	31506					0.13852936584976305
QSLKIFMH	8	Unmodified	_QSLKIFMH_					0	0	0			REV__ENST00000456517.2_1_11:33280233-33308030:+|nuORF	REV__ENST00000456517.2_1_11:33280233-33308030:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	335.1832458376884	3	335.184634	1002.53207	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.19	1	102.19	101.69	102.69	0								0	0	0	1.0178	1	42806	42806		0.45834	0	1		+		27469	13166	13562	13619	31507	31507					0.030907217793355812
QSLRAIHKI	9	Unmodified	_QSLRAIHKI_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3307372927666	2	533.330008	1064.64546	3.2286	0.0017219	-2.2967	-0.0012249	0.93197	0.00049705	533.3284680260418	107.57	0.16602	107.73	107.62	107.79	0.15781					25	8	4	0	0	0	0.83753	1	46283	46283		1.8442	1.0506	1	62196000	+		27470	10094	13563	13620	31508	31508					0.11572533216735792
QSLRAIHKI	9	Unmodified	_QSLRAIHKI_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3308593630791	2	533.330008	1064.64546	3.4859	0.0018591	-2.6539	-0.0014154	0.83201	0.00044374	533.3280285938623	107.56	0.1694	107.72	107.6	107.77	0.15796					22	8	4	0	0	0	0.83753	1	46218	46218		1.8442	0	1	71233000	+		27471	10094	13563	13620	31509	31509					0.11572533216735792
QSLRAIHKI	9	Unmodified	_QSLRAIHKI_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	533.330008	1064.64546	1.2162	0.00064864	1.9844	0.0010584	3.2006	0.001707	533.3314561237282	107.61	0.11964	107.61	107.55	107.67	0	-0.059019	0.003851	NaN	1.8442	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9865800	+		27472	10094	13563	13620							0.11572533216735792
QSLRAIHKI	9	Unmodified	_QSLRAIHKI_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	533.330008	1064.64546	2.8471	0.0015185	-1.1663	-0.00062202	1.6808	0.00089644	533.3293443928362	107.58	0.13358	107.63	107.56	107.69	0.052452	-0.042612	0.00049024	NaN	1.8442	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29451000	+		27473	10094	13563	13620							0.11572533216735792
QSLRAIHKI	9	Unmodified	_QSLRAIHKI_					0	0	0			REV__nc|ENSG00000139144|O75747-2|PIK3C2G	REV__nc|ENSG00000139144|O75747-2|PIK3C2G	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	533.330008	1064.64546	3.4859	0.0018591	-2.6539	-0.0014154	0.83201	0.00044374	533.3280285938623	107.56	0.1694	107.72	107.6	107.77	0.15796	0.045562	-0.0010965	NaN	1.8442	22	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	71233000	+		27474	10094	13563	13620							0.11572533216735792
QSLRPLPSIRI	11	Unmodified	_QSLRPLPSIRI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;VPS13B|p.S1313Ifs*22|1|0.24|ENSG00000132549|chr8:99501752-99501755|AAGT/-|frameshift_variant;nc|ENSG00000132549|Q7Z7G8-3|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	320.7004882693291	4	320.701578	1278.7772	-2.1291	-0.0006828	-0.10216	-3.2762E-05	-2.2312	-0.00071556	320.7023020289313	42.799	1.6488	42.799	42.353	44.002	0					207	52	6	0	0	0	0.99329	1	18189	18189		1.9275	0.47239	1	265120000			27475	2540	13564	13621	31510	31510					0.14896718513841734
QSLRPLPSIRI	11	Unmodified	_QSLRPLPSIRI_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;VPS13B|p.S1313Ifs*22|1|0.24|ENSG00000132549|chr8:99501752-99501755|AAGT/-|frameshift_variant;nc|ENSG00000132549|Q7Z7G8-3|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7005187869072	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	1.0214	1	17558	17558		1.0136	0	1	296590000			27476	2540	13564	13621	31511	31511					0.14896718513841734
QSNYHITF	8	Unmodified	_QSNYHITF_					0	0	0			REV__ENST00000550187.5_1_12:95365112-95365154:-|nuORF	REV__ENST00000550187.5_1_12:95365112-95365154:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2438842654228	2	505.240524	1008.46649	1.1681	0.00059015	3.9929	0.0020174	5.1609	0.0026075	505.24236842963705	20.882	0.23608	22.007	21.896	22.132	1.1254					12	7	2	0	0	0	0.65897	1	8714	8714		26.884	5.137	1	686700	+		27477	13825	13565	13622	31512	31512					-0.037399761420147115
QSNYHITF	8	Unmodified	_QSNYHITF_					0	0	0			REV__ENST00000550187.5_1_12:95365112-95365154:-|nuORF	REV__ENST00000550187.5_1_12:95365112-95365154:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	505.240524	1008.46649	1.1681	0.00059015	3.9929	0.0020174	5.1609	0.0026075	505.24236842963705	20.882	0.23608	22.007	21.896	22.132	1.1254	-0.018851	0.00029082	NaN	26.884	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	686700	+		27478	13825	13565	13622							-0.037399761420147115
QSPMYFFLRN	10	Unmodified	_QSPMYFFLRN_					0	0	0		ENSG00000170782|ENST00000379829|OR10A4	ENSG00000170782|ENST00000379829|OR10A4	ENSG00000170782|ENST00000379829|OR10A4	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823425173759	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5	1	9.578	9.078	10.078	0.077971								0	0	0	0.66256	1	3937	3937		0.12286	0	1				27479	4162	13566	13623	31513	31513					-0.016068539630396117
QSRIGLHWKAK	11	Unmodified	_QSRIGLHWKAK_					0	0	0			REV__ENSG00000162409|ENST00000371244|PRKAA2	REV__ENSG00000162409|ENST00000371244|PRKAA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.6974365115166	4	331.696561	1322.75714	-0.87036	-0.00028869	2.371	0.00078646	1.5007	0.00049777	331.697281180774	37.088	0.19368	38.372	38.317	38.51	1.284					24	14	2	0	0	0	1.0282	1	15580	15580		2.084	0.17759	1	4779800	+		27480	10644	13567	13624	31514	31514					0.10866967573883812
QSRLATLKIE	10	Unmodified	_QSRLATLKIE_					0	0	0		ENST00000485983.6_1_3:9079745-9122942:-|nuORF;nc|ENSG00000196220|O43295-3|SRGAP3;nc|ENSG00000196220|O43295-2|SRGAP3;ENSG00000196220|ENST00000383836|SRGAP3;ENST00000537556.1_1_12:64238596-64474299:+|nuORF;SRGAP1|p.G767Vfs*22|1|0.1|ENSG00000196935|chr12:64126051-64126052|-/TTGGGAAGCCTACTGTGCAGATTATAGTGTT|frameshift_variant;SRGAP1|p.L871Pfs*8|1|0.07|ENSG00000196935|chr12:64127929-64127930|CG/-|frameshift_variant;nc|ENSG00000196935|Q7Z6B7-2|SRGAP1;SRGAP1|p.V1061Ffs*17|1|0.04|ENSG00000196935|chr12:64142593-64142594|-/CTTTGTAGGGACATGGATGAAAT|frameshift_variant;ENSG00000196935|ENST00000355086|SRGAP1	ENST00000485983.6_1_3:9079745-9122942:-|nuORF	ENST00000485983.6_1_3:9079745-9122942:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8473388552666	2	579.845687	1157.67682	2.4566	0.0014245	-0.63694	-0.00036933	1.8197	0.0010551	579.8452201806564	88.432	0.39382	88.432	88.18	88.574	0					38	12	4	0	0	0	0.86043	1	36952	36952		5.7319	0	1	4349700			27481	4923	13568	13625	31515	31515					0.10429061460149569
QSRLQLTKP	9	Unmodified	_QSRLQLTKP_					0	0	0			REV__VWA3A|p.L778Afs*11|2|0.13|ENSG00000175267|chr16:22140185-22140186|-/C|frameshift_variant	REV__VWA3A|p.L778Afs*11|2|0.13|ENSG00000175267|chr16:22140185-22140186|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.8192626833916	2	535.819473	1069.62439	2.2742	0.0012185	-2.0972	-0.0011237	0.17697	9.4823E-05	535.8183241647791	83.981	0.4625	83.981	83.689	84.151	0					45	14	4	0	0	0	0.71526	2	35000	34950;35000		6.7232	0	1	13224000	+		27482	11150	13569	13626	31516;31517	31517					0.09236523117215256
QSRQLILRL	9	Unmodified	_QSRQLILRL_					0	0	0			REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.8578369021416	2	563.85639	1125.69823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.57	1	107.62	107.12	108.12	0.052452								0	0	0	0.42693	1	46039	46039		1.8442	0.36234	1		+		27483	9289	13570	13627	31518	31518					0.14040491279547496
QSRQLILRL	9	Unmodified	_QSRQLILRL_					0	0	0			REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8577148318291	2	563.85639	1125.69823	3.2036	0.0018064	-0.012594	-7.101E-06	3.191	0.0017993	563.8555834539915	107.51	0.19158	107.67	107.56	107.75	0.15781					23	9	4	0	0	0	0.83753	1	46243	46243		1.8442	0.19162	1	259600000	+		27484	9289	13570	13627	31519	31519					0.14040491279547496
QSRQLILRL	9	Unmodified	_QSRQLILRL_					0	0	0			REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	563.85639	1125.69823	3.2036	0.0018064	-0.012594	-7.101E-06	3.191	0.0017993	563.8555834539915	107.51	0.19158	107.67	107.56	107.75	0.15781	0.00029875	-0.00033472	NaN	1.8442	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	259600000	+		27485	9289	13570	13627							0.14040491279547496
QSRQLILRL	9	Unmodified	_QSRQLILRL_					0	0	0			REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	REV__ENST00000531778.1_1_11:134251834-134254167:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	563.85639	1125.69823	3.2487	0.0018318	0.77028	0.00043433	4.019	0.0022661	563.8556830703635	107.51	0.19357	107.67	107.54	107.74	0.15795	-0.00029875	0.00054814	NaN	1.8442	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	147620000	+		27486	9289	13570	13627							0.14040491279547496
QSSKMFHAK	9	Unmodified	_QSSKMFHAK_					0	0	0		ENST00000512558.5_1_5:79729945-79747536:+|nuORF;ENSG00000039319|ENST00000505560|ZFYVE16;nc|ENSG00000039319|Q7Z3T8-3|ZFYVE16;ENST00000510995.1_1_5:79729945-79735859:+|nuORF	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	ENST00000512558.5_1_5:79729945-79747536:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0698730349541	3	355.183293	1062.52805	2.8676	0.0010185	-0.42751	-0.00015184	2.4401	0.00086668	355.18312256207054	91.463	0.18253	92.818	92.706	92.888	1.3546					8	5	2	0	0	0	0.11941	1	38492	38492		1.0715	0	1	229090			27487	657	13571	13628	31520	31520					-0.0007136771437217249
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	697.3857910037041	2	697.382968	1392.75138	2.0919	0.0014589	1.0822	0.00075471	3.1741	0.0022136	697.3840257151294	55.497	0.47612	55.497	55.286	55.762	0					41	17	3	0	0	0	0.6971	3	23126	23080;23126;23175		18.373	6.8784	1	4646500	+		27488	10149	13572	13629	31521;31522;31523	31522					0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.3842651247978	2	697.382968	1392.75138	1.9555	0.0013638	1.5543	0.001084	3.5099	0.0024477	697.3840526396834	54.866	0.71276	55.187	54.962	55.675	0.32088					64	24	4	0	0	0	0.82375	3	22915	22915;22991;23028		14.405	8.1996	1	8341500	+		27489	10149	13572	13629	31524;31525;31526	31524					0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	697.3838378787041	2	697.382968	1392.75138	0.74575	0.00052007	1.2957	0.0009036	2.0415	0.0014237	697.3835910853152	53.652	0.48668	55.052	54.92	55.407	1.4005					36	18	3	0	0	0	0.82375	2	22418	22418;22463		14.405	2.9107	1	5390700	+		27490	10149	13572	13629	31527;31528	31527					0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	697.3859130740166	2	697.382968	1392.75138	0.053797	3.7517E-05	1.7973	0.0012534	1.8511	0.0012909	697.3839265973753	53.085	0.48799	55.055	54.899	55.387	1.9697					47	23	3	0	0	0	0.82375	1	22262	22262		14.405	5.0223	1	6757800	+		27491	10149	13572	13629	31529	31529					0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	697.382968	1392.75138	2.0919	0.0014589	1.0822	0.00075471	3.1741	0.0022136	697.3840257151294	55.497	0.47612	55.497	55.286	55.762	0	0.29941	-0.00049364	NaN	18.373	41	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4646500	+		27492	10149	13572	13629							0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	697.382968	1392.75138	1.9555	0.0013638	1.5543	0.001084	3.5099	0.0024477	697.3840526396834	54.866	0.71276	55.187	54.962	55.675	0.32088	-0.011056	0.00016485	NaN	18.373	64	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8341500	+		27493	10149	13572	13629							0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	697.382968	1392.75138	0.74575	0.00052007	1.2957	0.0009036	2.0415	0.0014237	697.3835910853152	53.652	0.48668	55.052	54.92	55.407	1.4005	-0.14566	-0.00019586	NaN	18.373	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5390700	+		27494	10149	13572	13629							0.07071824271542937
QSSRVLYYKLH	11	Unmodified	_QSSRVLYYKLH_					0	0	0			REV__nc|ENSG00000141449|Q9C091-3|GREB1L	REV__nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	697.382968	1392.75138	0.053797	3.7517E-05	1.7973	0.0012534	1.8511	0.0012909	697.3839265973753	53.085	0.48799	55.055	54.899	55.387	1.9697	-0.1427	0.0005037	NaN	18.373	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6757800	+		27495	10149	13572	13629							0.07071824271542937
QSTLSYILI	9	Unmodified	_QSTLSYILI_					0	0	0		ENST00000451324.6_1_1:196197356-196228734:-|nuORF;ENST00000498426.5_1_1:196197356-196286329:-|nuORF;nc|ENSG00000162687|Q6UVM3-3|KCNT2;nc|ENSG00000162687|Q6UVM3-2|KCNT2;ENSG00000162687|ENST00000294725|KCNT2	ENST00000451324.6_1_1:196197356-196228734:-|nuORF	ENST00000451324.6_1_1:196197356-196228734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3013183474541	2	519.297507	1036.58046	2.6651	0.001384	0.89396	0.00046423	3.559	0.0018482	519.2979431428288	59.337	0.55915	60.757	60.617	61.176	1.4196					39	17	3	0	0	0	0.42305	1	24876	24876		19.257	1.122	1	3221300			27496	3638	13573	13630	31530	31530					0.06363493900221329
QSTYWRWGSGE	11	Unmodified	_QSTYWRWGSGE_					0	0	0		ENST00000606645.1_1_1:2478279-2478705:+|nuORF	ENST00000606645.1_1_1:2478279-2478705:+|nuORF	ENST00000606645.1_1_1:2478279-2478705:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8704406619072	3	452.870431	1355.58946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6742	1	5.4106	4.9106	5.9106	0.73642								0	0	0	0.63775	1	1938	1938		0	0	1				27497	7561	13574	13631	31531	31531					-0.07410764481414844
QSTYWRWGSGE	11	Unmodified	_QSTYWRWGSGE_					0	0	0		ENST00000606645.1_1_1:2478279-2478705:+|nuORF	ENST00000606645.1_1_1:2478279-2478705:+|nuORF	ENST00000606645.1_1_1:2478279-2478705:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8702880740166	3	452.870431	1355.58946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8625	1	5.5989	5.0989	6.0989	0.73642								0	0	0	0.63775	1	2017	2017		0	0	1				27498	7561	13574	13631	31532	31532					-0.07410764481414844
QSVHFQTIF	9	Unmodified	_QSVHFQTIF_					0	0	0		nc|ENSG00000113643|P54136-2|RARS1;ENSG00000113643|ENST00000231572|RARS1	nc|ENSG00000113643|P54136-2|RARS1	nc|ENSG00000113643|P54136-2|RARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7863647341728	2	553.785099	1105.55564	2.5603	0.0014179	0.054903	3.0405E-05	2.6152	0.0014483	553.7849970723413	50.243	0.4707	51.634	51.451	51.921	1.3911					34	14	3	0	0	0	0.037098	2	21045	20999;21045		78.728	42.601	1	3542700			27499	1834	13575	13632	31533;31534	31534					0.007088588175065524
QSVHFQTIF	9	Unmodified	_QSVHFQTIF_					0	0	0		nc|ENSG00000113643|P54136-2|RARS1;ENSG00000113643|ENST00000231572|RARS1	nc|ENSG00000113643|P54136-2|RARS1	nc|ENSG00000113643|P54136-2|RARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7861816287041	2	553.785099	1105.55564	1.6013	0.00088676	0.26615	0.00014739	1.8674	0.0010341	553.7852404252582	49.687	0.4715	51.664	51.475	51.946	1.9772					33	14	3	0	0	0	0.066815	2	20807	20769;20807		61.357	29.052	1	3051900			27500	1834	13575	13632	31535;31536	31536					0.007088588175065524
QSVKFRRIK	9	Unmodified	_QSVKFRRIK_					0	0	0			REV__ENSG00000164985|ENST00000380733|PSIP1	REV__ENSG00000164985|ENST00000380733|PSIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	3	387.912013	1160.71421	-1.0028	-0.00038902	1.2448	0.00048286	0.24191	9.384E-05	387.9124578510894	11.359	0.095423	12.029	11.981	12.077	0.66934					4	2	2	0	0	0	0.11901	1	4714	4714		0	0	1	296830	+		27501	10760	13576	13633	31537	31537					0.14028197516449836
QSVQKRYLR	9	Unmodified	_QSVQKRYLR_					0	0	0		ENST00000531719.5_1_11:46894680-46894974:+|nuORF	ENST00000531719.5_1_11:46894680-46894974:+|nuORF	ENST00000531719.5_1_11:46894680-46894974:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3442870974541	2	589.343646	1176.67274	2.2704	0.0013381	-0.47629	-0.0002807	1.7941	0.0010574	589.3433130884748	91.835	0.44281	91.835	91.597	92.04	0					23	13	2	0	0	0	0.85068	1	38374	38374		0.45834	0	1	1900000			27502	7172	13577	13634	31538	31538					0.09147016757128767
QSVRHFGTQV	10	Unmodified	_QSVRHFGTQV_					0	0	0			REV__ENST00000602663.1_1_15:30781425-30781716:+|nuORF	REV__ENST00000602663.1_1_15:30781425-30781716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8079711794853	2	579.804354	1157.59415	2.0242	0.0011736	3.0208	0.0017515	5.045	0.0029251	579.8057802518548	76.801	0.37894	77.117	76.913	77.292	0.31654					35	11	4	0	0	0	0.79268	1	32079	32079		13.042	1.4022	1	5112600	+		27503	14121	13578	13635	31539	31539					0.021661644520236223
QSVRHFGTQV	10	Unmodified	_QSVRHFGTQV_					0	0	0			REV__ENST00000602663.1_1_15:30781425-30781716:+|nuORF	REV__ENST00000602663.1_1_15:30781425-30781716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8072997927666	2	579.804354	1157.59415	2.6897	0.0015595	2.9074	0.0016857	5.5971	0.0032452	579.8055454091048	75.369	0.48906	77.151	76.945	77.434	1.7817					41	15	4	0	0	0	0.79268	1	31568	31568		13.042	1.4022	1	11882000	+		27504	14121	13578	13635	31540	31540					0.021661644520236223
QTEYLEERRV	10	Unmodified	_QTEYLEERRV_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;ENST00000505987.1_1_4:88813329-88813827:+|nuORF;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000183199|Q58FF7|HSP90AB3P	ENSG00000096384|ENST00000371646|HSP90AB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	441.1844055056572	3	441.561486	1321.66263	0.15871	7.0079E-05	0.039273	1.7342E-05	0.19798	8.742E-05	441.56087243612484	13.005	0.30699	13.005	12.808	13.115	0					19	9	3	0	0	0	0.12503	1	5311	5311		11.518	2.7661	1	1109200			27505	1194;7944	13579	13636	31541	31541					0.014663642412187983
QTFYQFVI	8	Unmodified	_QTFYQFVI_					0	0	0		tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2731811404228	2	523.271293	1044.52803	1.0777	0.00056392	2.1869	0.0011443	3.2645	0.0017082	523.272290125997	51.845	1.1346	53.241	52.95	54.085	1.3966					57	37	2	0	0	0	0.67986	1	21878	21878		32.305	11.434	1	1613300			27506	16385	13580	13637	31542	31542					0.007549555572722966
QTFYQFVI	8	Unmodified	_QTFYQFVI_					0	0	0		tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2717162966728	2	523.271293	1044.52803	0.52209	0.0002732	2.7729	0.001451	3.295	0.0017242	523.2723824146115	51.703	1.2361	53.675	52.964	54.2	1.9722					59	43	2	0	0	0	0.60362	1	21659	21659		39.957	5.5556	1	1923300			27507	16385	13580	13637	31543	31543					0.007549555572722966
QTFYQFVI	8	Unmodified	_QTFYQFVI_					0	0	0		tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	tr|A0A553SMP9|A0A553SMP9_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_22990PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	523.271293	1044.52803	2.1374	0.0011185	2.4925	0.0013043	4.63	0.0024227	523.2729847373763	53.542	1.0367	53.542	53.339	54.375	0	0.096138	-0.00023997	NaN	39.957	54	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	589040			27508	16385	13580	13637							0.007549555572722966
QTIGGAKG	8	Unmodified	_QTIGGAKG_					0	0	0			REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	366.2057983279228	2	366.205953	730.397353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.99	1	105.99	105.49	106.49	0								0	0	0	1.0178	1	45127	45127		0.79363	0	1		+		27509	8357	13581	13638	31544	31544					0.02136984629089511
QTKASLMIIP	10	Unmodified	_QTKASLMIIP_					0	0	0			REV__tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	REV__tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	551.3194457888603	2	551.32046	1100.62637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.6	1	103.6	103.1	104.1	0								0	0	0	0.65836	1	43525	43525		6.7232	2.3939	1		+		27510	15438	13582	13639	31545	31545					0.08007815810810825
QTKASLMIIP	10	Unmodified	_QTKASLMIIP_					0	0	0			REV__tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	REV__tr|A0A7D6VSB3|A0A7D6VSB3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_05095PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	551.3193847537041	2	551.32046	1100.62637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.58	1	103.64	103.14	104.14	0.059502								0	0	0	0.66052	1	43478	43478		3.5965	0	1		+		27511	15438	13582	13639	31546	31546					0.08007815810810825
QTKIIKLVK	9	Unmodified	_QTKIIKLVK_					0	0	0			REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	REV__tr|A0A7D7A277|A0A7D7A277_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18620PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1070.072680652142	1	1070.72959	1069.72232	1.6032	0.0017166	-4.3966	-0.0047075	-2.7934	-0.002991	1070.725494491622	36.329	0.056705	36.329	36.28	36.337	0					6	5	2	0	0	0	0.11833	1	15214	15214		1.8442	0	1	6651100	+		27512	15845	13583	13640	31547	31547					0.1902433171321718
QTLLYTAAKK	10	Unmodified	_QTLLYTAAKK_					0	0	0		nc|ENSG00000133704|O15397-2|IPO8;ENSG00000133704|ENST00000256079|IPO8	nc|ENSG00000133704|O15397-2|IPO8	nc|ENSG00000133704|O15397-2|IPO8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8395263552666	2	568.837331	1135.66011	1.6684	0.00094902	0.29877	0.00016995	1.9671	0.001119	568.8372587670023	42.759	0.2852	43.08	42.911	43.196	0.32058					20	9	3	0	0	0	0.8325	1	17931	17931		8.7454	0.58988	1	1764400			27513	2580	13584	13641	31548	31548					0.09770560574224874
QTPFVRRQVRK	11	Unmodified	_QTPFVRRQVRK_					0	0	0		nc|ENSG00000127481|Q5T4S7-3|UBR4;nc|ENSG00000127481|Q5T4S7-4|UBR4;ENSG00000127481|ENST00000375254|UBR4;nc|ENSG00000127481|Q5T4S7-2|UBR4;UBR4|p.K4685Nfs*13|1|0.19|ENSG00000127481|chr1:19093369-19093370|-/GTGTGTGCTCGGG|frameshift_variant	nc|ENSG00000127481|Q5T4S7-3|UBR4	nc|ENSG00000127481|Q5T4S7-3|UBR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9233886599541	2	707.923126	1413.8317	2.5022	0.0017714	-1.7417	-0.001233	0.76049	0.00053837	707.9215608420059	84.892	1.2969	85.153	84.501	85.797	0.26083					79	40	3	0	0	0	1.0393	1	35496	35496		0.35063	0	1	1377500			27514	2336	13585	13642	31549	31549					0.14133730385219678
QTSLQAREL	9	Unmodified	_QTSLQAREL_					0	0	0		ENSG00000023445|ENST00000263464|BIRC3	ENSG00000023445|ENST00000263464|BIRC3	ENSG00000023445|ENST00000263464|BIRC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1045.571337878704	1	1045.56365	1044.55637	4.0124	0.0041952	2.0968	0.0021923	6.1091	0.0063875	1045.5654373207233	73.808	0.52293	75.605	75.377	75.9	1.7962					36	16	3	0	0	0	0.049839	1	30965	30965		68.081	5.508	1	8661200			27515	618	13586	13643	31550	31550					0.035876534665476356
QTVHTGERPYK	11	Unmodified	_QTVHTGERPYK_					0	0	0		ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant;ENSG00000198633|ENST00000433050|ZNF534;nc|ENSG00000198633|Q76KX8|ZNF534	ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant	ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	658.3416625857353	2	658.341301	1314.66805	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.208	1	19.208	18.708	19.708	0								0	0	0	0.63774	1	7980	7980		7.609	1.8771	1				27516	5063	13587	13644	31551	31551					0.023300878236796052
QTVWLQDL	8	Unmodified	_QTVWLQDL_					0	0	0		ENST00000368053.8_1_6:131926416-131926464:-|nuORF	ENST00000368053.8_1_6:131926416-131926464:-|nuORF	ENST00000368053.8_1_6:131926416-131926464:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3018066287041	2	501.766374	1001.5182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.43	1	58.398	57.898	58.898	1.9684								0	0	0	1.0178	1	23666	23666		18.135	0	1				27517	6082	13588	13645	31552	31552					0.01749767551905279
QVAAHADPEL	10	Unmodified	_QVAAHADPEL_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7666503787041	2	525.764363	1049.51417	1.556	0.00081808	2.8005	0.0014724	4.3565	0.0022905	525.7656298672518	48.46	0.4015	49.848	49.585	49.987	1.388					28	12	3	0	0	0	0.49886	2	20253	20253;20323		27.629	6.6987	1	1858300	+		27518	10255	13589	13646	31553;31554	31553					-0.008603219418091612
QVALLVLVP	9	Unmodified	_QVALLVLVP_					0	0	0			REV__ENST00000292478.8_1_7:99031036-99032482:-|nuORF	REV__ENST00000292478.8_1_7:99031036-99032482:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.2277099490166	3	317.879428	950.616454	-0.15773	-5.014E-05	-0.93595	-0.00029752	-1.0937	-0.00034766	317.87971293002397	22.22	0.81958	23.836	23.706	24.525	1.6158					32	26	2	0	0	0	0.11938	1	9232	9232		1.1933	0	1	1345100	+		27519	12283	13590	13647	31555	31555					0.13916995867748483
QVARLQGK	8	Unmodified	_QVARLQGK_					0	0	0			REV__ENST00000513495.5_1_4:8230952-8235052:+|nuORF	REV__ENST00000513495.5_1_4:8230952-8235052:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2758361697197	2	450.274701	898.534849	2.9752	0.0013396	0.7141	0.00032154	3.6892	0.0016612	450.27495817116215	75.262	1.7473	76.568	76.09	77.837	1.3063					108	56	5	0	0	0	0.89051	1	31488	31488		2.3027	0	1	99267000	+		27520	13548	13591	13648	31556	31556					0.08152313228526964
QVCAKQKLA	9	Unmodified	_QVCAKQKLA_					0	0	0		nc|ENSG00000165891|Q96AV8-2|E2F7;nc|ENSG00000165891|Q96AV8-3|E2F7;ENSG00000165891|ENST00000322886|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	nc|ENSG00000165891|Q96AV8-2|E2F7	MSMS	GG20161007_CRH_Patient100_A02_02	2	330.1920349001884	3	330.191788	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.344	1	82.624	82.124	83.124	0.2802								0	0	0	0.42693	1	34432	34432		0.96228	0.33545	1				27521	3866	13592	13649	31557	31557					0.0592610680805592
QVCSHLHLFF	10	Unmodified	_QVCSHLHLFF_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8109619021416	2	615.808051	1229.60155	2.7138	0.0016712	2.8937	0.0017819	5.6075	0.0034531	615.8095607539506	63.074	0.53069	64.487	64.254	64.785	1.4134					40	16	3	0	0	0	0.78005	1	26488	26488		14.405	0.79051	1	2914700			27522	4518	13593	13650	31558	31558					-0.004068192719159924
QVCVLEQMIHI	11	Unmodified	_QVCVLEQMIHI_					0	0	0		ENST00000515261.1_1_4:186444434-186456588:-|nuORF	ENST00000515261.1_1_4:186444434-186456588:-|nuORF	ENST00000515261.1_1_4:186444434-186456588:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2314941287041	3	438.229914	1311.66791	1.1352	0.00049749	3.0461	0.0013349	4.1813	0.0018324	438.23127156296664	37.576	0.63073	37.576	37.386	38.017	0					34	21	2	0	0	0	0.93873	1	15803	15803		7.4771	0.43998	1	1159200			27523	7052	13594	13651	31559	31559					0.02454628507871348
QVDSNLPVWI	10	Unmodified	_QVDSNLPVWI_					0	0	0			REV__tr|A0A7D6VMC3|A0A7D6VMC3_9CLOTDUF5105domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13075PE=4SV=1	REV__tr|A0A7D6VMC3|A0A7D6VMC3_9CLOTDUF5105domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13075PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.8113281130791	2	585.811313	1169.60807	2.2853	0.0013387	-2.21	-0.0012947	0.075228	4.407E-05	585.8100279638983	82.926	0.31267	84.596	84.51	84.823	1.67					13	9	2	0	0	0	0.82019	1	34810	34810		10.074	1.4806	1	1926600	+		27524	15314	13595	13652	31560	31560					0.030053971604729668
QVEEECCLEMH	11	Unmodified	_QVEEECCLEMH_					0	0	0		ENST00000479534.5_1_1:17395541-17401618:-|nuORF;ENSG00000117115|ENST00000375486|PADI2	ENST00000479534.5_1_1:17395541-17401618:-|nuORF	ENST00000479534.5_1_1:17395541-17401618:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.5096008181572	3	450.510529	1348.50976	0.6192	0.00027896	-2.9976	-0.0013504	-2.3784	-0.0010715	450.50940991107143	17.341	1.325	17.341	16.847	18.171	0					135	42	5	0	0	0	1.0191	3	7266	7266;7319;7372		2.6312	1.5215	1	3268600			27525	1996	13596	13653	31561;31562;31563	31561					-0.15055658533560745
QVEEFCYQPM	10	Unmodified	_QVEEFCYQPM_					0	0	0		nc|ENSG00000175040|Q9Y4C5-2|CHST2;ENSG00000175040|ENST00000309575|CHST2	nc|ENSG00000175040|Q9Y4C5-2|CHST2	nc|ENSG00000175040|Q9Y4C5-2|CHST2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.2642089724541	2	637.265024	1272.5155	-0.12843	-8.1844E-05	-2.1367	-0.0013616	-2.2651	-0.0014435	637.2630596749882	16.319	0.13891	17.359	17.266	17.405	1.0392					6	4	2	0	0	0	0.88314	1	6787	6787		3.2813	0	1	536910			27526	4350	13597	13654	31564	31564					-0.10986191959591451
QVEEFCYQPM	10	Unmodified	_QVEEFCYQPM_					0	0	0		nc|ENSG00000175040|Q9Y4C5-2|CHST2;ENSG00000175040|ENST00000309575|CHST2	nc|ENSG00000175040|Q9Y4C5-2|CHST2	nc|ENSG00000175040|Q9Y4C5-2|CHST2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	637.265024	1272.5155	-0.023775	-1.5151E-05	-1.5787	-0.0010061	-1.6025	-0.0010212	637.2635024507089	16.492	0.09774	17.39	17.348	17.445	0.89794	0.01564	0.00046066	NaN	3.2813	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	607990			27527	4350	13597	13654							-0.10986191959591451
QVELPGPGQWV	11	Unmodified	_QVELPGPGQWV_					0	0	0		ENSG00000157353|ENST00000288078|FCSK;nc|ENSG00000157353|Q8N0W3-2|FCSK	ENSG00000157353|ENST00000288078|FCSK	ENSG00000157353|ENST00000288078|FCSK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3097411990166	2	605.316763	1208.61897	4.695	0.002842	3.1573	0.0019111	7.8523	0.0047531	605.3189907973127	87.851	0.73331	89.301	88.938	89.671	1.45					59	22	4	0	0	0	0.58697	1	37134	37134		21.537	1.0834	1	11305000			27528	3470	13598	13655	31565	31565					0.023007995347597898
QVESPPLVV	9	Unmodified	_QVESPPLVV_					0	0	0			REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2776672244072	2	484.276575	966.538597	1.7592	0.00085195	0.70792	0.00034283	2.4671	0.0011948	484.2767524989083	54.597	0.53252	56.002	55.739	56.272	1.4048					50	16	4	0	0	0	0.30098	1	22943	22943		25.399	6.1423	1	8546400	+		27529	10754	13599	13656	31566	31566					0.05398938211715176
QVESPPLVV	9	Unmodified	_QVESPPLVV_					0	0	0			REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	REV__SLC4A2|p.F726Lfs*12|1|0.27|ENSG00000164889|chr7:151071590-151071590|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2773925662041	2	484.276575	966.538597	1.6297	0.00078923	1.0058	0.00048708	2.6355	0.0012763	484.2767608399012	54.131	0.53446	56.099	55.814	56.348	1.9684					58	16	5	0	0	0	0.20671	1	22755	22755		32.305	7.6316	1	9859800	+		27530	10754	13599	13656	31567	31567					0.05398938211715176
QVESTCKHNF	10	Unmodified	_QVESTCKHNF_					0	0	0			REV__ENST00000381031.7_1_22:46689482-46689836:+|nuORF	REV__ENST00000381031.7_1_22:46689482-46689836:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7780639529228	2	596.774405	1191.53426	2.9711	0.0017731	3.3513	0.002	6.3224	0.0037731	596.7766375374698	75.055	0.55697	76.361	76.059	76.615	1.3063					56	17	5	0	0	0	0.78468	1	31518	31518		13.906	0	1	3944800	+		27531	12767	13600	13657	31568	31568					-0.05384894273493046
QVFDLRKI	8	Unmodified	_QVFDLRKI_					0	0	0		nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;ENSG00000197136|ENST00000355703|PCNX3;ENST00000531280.1_1_11:65397907-65401612:+|nuORF	nc|ENSG00000197136|Q9H6A9-3|PCNX3	nc|ENSG00000197136|Q9H6A9-3|PCNX3	MSMS	GG20161007_CRH_Patient100_W632_01	3	509.8054992556572	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.96	1	69.338	68.838	69.838	1.3778								0	0	0	1.0178	1	28516	28516		9.3474	0	1				27532	4983	13601	13658	31569	31569					0.08902039576844345
QVFGEATK	8	Unmodified	_QVFGEATK_					0	0	0		ENSG00000117984|ENST00000236671|CTSD	ENSG00000117984|ENST00000236671|CTSD	ENSG00000117984|ENST00000236671|CTSD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.2326537966728	2	440.232168	878.449782	0.25056	0.0001103	0.65337	0.00028764	0.90393	0.00039794	440.232487638095	14.039	0.17301	14.809	14.701	14.874	0.76937					9	5	2	0	0	0	0.74295	1	5836	5836		26.268	7.0112	1	978900			27533	2026	13602	13659	31570	31570					0.005695229720458883
QVFGEATK	8	Unmodified	_QVFGEATK_					0	0	0		ENSG00000117984|ENST00000236671|CTSD	ENSG00000117984|ENST00000236671|CTSD	ENSG00000117984|ENST00000236671|CTSD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.2319518923759	2	440.232168	878.449782	0.27507	0.00012109	0.22974	0.00010114	0.50481	0.00022223	440.2319838624722	13.893	0.15232	14.721	14.643	14.795	0.82789					7	4	2	0	0	0	0.74295	1	5766	5766		26.268	7.0112	1	683200			27534	2026	13602	13659	31571	31571					0.005695229720458883
QVGGGARA	8	Unmodified	_QVGGGARA_					0	0	0		nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	715.3880493044853	1	715.384562	714.377286	2.7043	0.0019346	1.0675	0.00076367	3.7718	0.0026983	715.3855549364788	104.45	0.11057	104.5	104.44	104.55	0.056801					8	5	2	0	0	0	0.89178	1	44054	44054		0.69038	0	1	30281000			27535	521	13603	13660	31572	31572					0.008672336891436316
QVGLIVAAE	9	Unmodified	_QVGLIVAAE_					0	0	0			REV__ENST00000285021.11_1_3:14214430-14214550:-|nuORF	REV__ENST00000285021.11_1_3:14214430-14214550:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	899.5211669802666	1	899.519659	898.512382	1.9754	0.0017769	0.41373	0.00037216	2.3891	0.002149	899.5198634141199	41.439	0.38438	42.765	42.556	42.94	1.3255					29	11	3	0	0	0	0.10993	2	17419	17329;17419		46.021	3.9264	1	4401200	+		27536	12268	13604	13661	31573;31574	31574					0.05906669040234647
QVGTEIVLT	9	Unmodified	_QVGTEIVLT_					0	0	0		tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	959.5439330935478	1	959.540788	958.533512	2.0261	0.0019441	-0.95739	-0.00091866	1.0687	0.0010254	959.5404126323791	63.054	0.2505	63.054	62.926	63.176	0					12	7	2	0	0	0	0.079895	1	26290	26290		56.177	4.5472	1	467680			27537	16506	13605	13662	31575	31575					0.05258634349092972
QVGTEIVLT	9	Unmodified	_QVGTEIVLT_					0	0	0		tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	tr|A0A553SQ97|A0A553SQ97_NIACIChaperoneproteinHtpGOS=NialliacirculansOX=1397GN=htpGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	959.5430786013603	1	959.540788	958.533512	2.3328	0.0022384	-0.17846	-0.00017124	2.1544	0.0020672	959.5416844759183	61.451	0.70768	62.869	62.312	63.02	1.4177					29	22	2	0	0	0	0.04145	1	25796	25796		74.929	0	1	2052900			27538	16506	13605	13662	31576	31576					0.05258634349092972
QVHPDTGISSK	11	Unmodified	_QVHPDTGISSK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000436555.1_1_1:228651947-228652295:-|nuORF	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	390.2032348513603	3	390.20341	1167.5884	-0.95081	-0.00037101	0.35406	0.00013815	-0.59676	-0.00023286	390.2036501558781	11.453	0.31569	12.122	11.95	12.265	0.66934					23	9	4	0	0	0	0.032126	1	4749	4749		77.867	52.876	1	24238000			27539	3500	13606	13663	31577	31577					0.011310211496947886
QVHPDTGISSK	11	Unmodified	_QVHPDTGISSK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000436555.1_1_1:228651947-228652295:-|nuORF	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8012573122978	2	584.801477	1167.5884	-0.36191	-0.00021164	1.2209	0.00071399	0.859	0.00050234	584.8020454639571	11.453	0.15624	12.122	12.013	12.169	0.66934					11	4	3	0	0	0	0.12516	1	4753	4753		60.899	31.818	1	2741400			27540	3500	13606	13663	31578	31578					0.011310211496947886
QVHPDTGISSK	11	Unmodified	_QVHPDTGISSK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000436555.1_1_1:228651947-228652295:-|nuORF	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	390.2032958865166	3	390.20341	1167.5884	-0.14198	-5.5401E-05	0.031472	1.228E-05	-0.11051	-4.3121E-05	390.20350446668397	11.291	0.22055	12.053	11.909	12.13	0.76165					20	6	5	0	0	0	0.026085	1	4681	4681		93.928	79.523	1	19835000			27541	3500	13606	13663	31579	31579					0.011310211496947886
QVHPDTGISSK	11	Unmodified	_QVHPDTGISSK_					0	0	0		nc|ENSG00000203814|Q5QNW6-2|H2BC18;ENSG00000233822|ENST00000612898|H2BC15;ENST00000469483.1_1_1:149775510-149783878:-|nuORF;ENSG00000158373|ENST00000377777|H2BC5;ENSG00000277224|ENST00000356530|H2BC7;ENSG00000278588|ENST00000377733|H2BC10;ENSG00000274290|ENST00000614097|H2BC6;ENSG00000273703|ENST00000621112|H2BC14;ENSG00000234289|ENST00000599962|H2BC12L;ENSG00000273802|ENST00000541790|H2BC8;ENSG00000203814|ENST00000369167|H2BC18;ENSG00000197903|ENST00000356950|H2BC12;ENSG00000185130|ENST00000377401|H2BC13;ENSG00000180596|ENST00000396984|H2BC4;ENSG00000275713|ENST00000619466|H2BC9;ENSG00000124635|ENST00000339812|H2BC11;ENSG00000184678|ENST00000369155|H2BC21;ENSG00000196890|ENST00000693095|H2BC26;ENSG00000274641|ENST00000616182|H2BC17;ENSG00000276410|ENST00000615966|H2BC3;ENSG00000146047|ENST00000274764|H2BC1;ENST00000436555.1_1_1:228651947-228652295:-|nuORF	nc|ENSG00000203814|Q5QNW6-2|H2BC18	nc|ENSG00000203814|Q5QNW6-2|H2BC18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8019897341728	2	584.801477	1167.5884	0.0098021	5.7323E-06	0.14427	8.4369E-05	0.15407	9.0101E-05	584.8018014446653	11.291	0.1569	12.053	11.973	12.13	0.76165					10	4	3	0	0	0	0.075628	1	4687	4687		73.196	29.338	1	2685000			27542	3500	13606	13663	31580	31580					0.011310211496947886
QVIHRLLLIW	10	Unmodified	_QVIHRLLLIW_					0	0	0		ENST00000380588.4_1_21:41163939-41173276:+|nuORF	ENST00000380588.4_1_21:41163939-41173276:+|nuORF	ENST00000380588.4_1_21:41163939-41173276:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	646.3230468630791	2	645.905882	1289.79721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.128	1	96.53	96.03	97.03	0.40208								0	0	0	0.66031	1	40439	40439		3.9444	2.2918	1				27543	6226	13607	13664	31581	31581					0.16390514244471888
QVIIIQPQV	9	Unmodified	_QVIIIQPQV_					0	0	0		ENSG00000056487|ENST00000313237|PHF21B	ENSG00000056487|ENST00000313237|PHF21B	ENSG00000056487|ENST00000313237|PHF21B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	518.7874023318291	2	519.321317	1036.62808	2.6348	0.0013683	-3.0178	-0.0015672	-0.38296	-0.00019888	519.3200451476984	77.749	1.0837	79.03	78.474	79.557	1.2809					57	34	3	0	0	0	0.11463	1	32790	32790		12.532	0.89125	1	10294000			27544	726	13608	13665	31582	31582					0.11123192891068356
QVIKDITQVM	10	Unmodified	_QVIKDITQVM_					0	0	0		CEP250|p.E565Kfs*2|1|0.05|ENSG00000126001|chr20:35475622-35475622|G/-|frameshift_variant;CEP250|p.E913Afs*78|1|0.04|ENSG00000126001|chr20:35490787-35490788|-/C|frameshift_variant;nc|ENSG00000126001|Q9BV73-2|CEP250;ENSG00000126001|ENST00000397527|CEP250	CEP250|p.E565Kfs*2|1|0.05|ENSG00000126001|chr20:35475622-35475622|G/-|frameshift_variant	CEP250|p.E565Kfs*2|1|0.05|ENSG00000126001|chr20:35475622-35475622|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8284789919853	2	587.828649	1173.64274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.485	1	97.769	97.269	98.269	0.28442								0	0	0	0.033394	1	41022	41022		47.594	0	1				27545	148	13609	13666	31583	31583					0.0628689697689424
QVIKGLLKI	9	Unmodified	_QVIKGLLKI_					0	0	0			REV__tr|A0A553SLU2|A0A553SLU2_NIACIUronateisomeraseOS=NialliacirculansOX=1397GN=uxaCPE=3SV=1	REV__tr|A0A553SLU2|A0A553SLU2_NIACIUronateisomeraseOS=NialliacirculansOX=1397GN=uxaCPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.2179138064384	3	337.902344	1010.6852	2.4239	0.00081904	-2.1925	-0.00074085	0.23141	7.8195E-05	337.9017751506102	81.472	1.243	82.706	82.348	83.591	1.2332					57	39	2	0	0	0	0.11909	1	34551	34551		0.96228	0	1	459310	+		27546	14997	13610	13667	31584	31584					0.18028660167453836
QVIKGLLKI	9	Unmodified	_QVIKGLLKI_					0	0	0			REV__tr|A0A553SLU2|A0A553SLU2_NIACIUronateisomeraseOS=NialliacirculansOX=1397GN=uxaCPE=3SV=1	REV__tr|A0A553SLU2|A0A553SLU2_NIACIUronateisomeraseOS=NialliacirculansOX=1397GN=uxaCPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	337.902344	1010.6852	1.8096	0.00061146	-1.9122	-0.00064613	-0.1026	-3.467E-05	337.9017063009989	80.809	0.4941	82.505	82.272	82.766	1.6959	-0.10019	0.00012511	NaN	0.96228	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254650	+		27547	14997	13610	13667							0.18028660167453836
QVKAKAKA	8	Unmodified	_QVKAKAKA_					0	0	0		ENSG00000177352|ENST00000321895|CCDC71	ENSG00000177352|ENST00000321895|CCDC71	ENSG00000177352|ENST00000321895|CCDC71	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2766601443291	2	422.27417	842.533787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.575	1	99.648	99.148	100.15	0.072716								0	0	0	1.0178	1	41693	41693		2.3027	0	1				27548	4442	13611	13668	31585	31585					0.10622098859607831
QVKKGTEH	8	Unmodified	_QVKKGTEH_					0	0	0		ENST00000548263.5_1_12:54105730-54106093:-|nuORF	ENST00000548263.5_1_12:54105730-54106093:-|nuORF	ENST00000548263.5_1_12:54105730-54106093:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.5242797732353	3	309.506653	925.498129	-2.9223	-0.00090448	-1.6015	-0.00049566	-4.5238	-0.0014001	309.5063142284127	25.856	0.73042	25.856	25.595	26.325	0					42	23	3	0	0	0	2.3239	1	10757	10757		1.4819	0.15237	1	2131200			27549	7248	13612	13669	31586	31586					0.03240016611937335
QVKKLKAIRNY	11	Unmodified	_QVKKLKAIRNY_					0	0	0			REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.2878906130791	3	454.285628	1359.83505	3.4241	0.0015555	-0.71946	-0.00032684	2.7047	0.0012287	454.6189433081645	82.34	0.34268	84.01	83.831	84.173	1.67					18	10	2	0	0	0	1.0388	1	34548	34548		0.50596	0.051438	1	1432100	+		27550	8873	13613	13670	31587	31587					0.1695298043925959
QVKQLVQLL	9	Unmodified	_QVKQLVQLL_					0	0	0			REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF	REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	534.2788574099541	2	534.842416	1067.67028	3.205	0.0017142	-2.3928	-0.0012798	0.81215	0.00043437	534.840886169446	73.825	0.42889	75.621	75.44	75.869	1.7962					25	13	2	0	0	0	0.11071	1	31038	31038		10.824	4.1008	1	900390	+		27551	10638	13614	13671	31588	31588					0.1391516829946795
QVKQLVQLL	9	Unmodified	_QVKQLVQLL_					0	0	0			REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF	REV__ENST00000535009.5_1_11:68816453-68846494:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.842416	1067.67028	2.5306	0.0013534	-0.2283	-0.0001221	2.3023	0.0012313	534.8421797943807	75.478	0.34265	75.8	75.613	75.956	0.32163	0.093659	0.0015779	NaN	10.824	11	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	297150	+		27552	10638	13614	13671							0.1391516829946795
QVKRWVGV	8	Unmodified	_QVKRWVGV_					0	0	0		ENST00000555759.1_1_14:95904955-95916441:-|nuORF	ENST00000555759.1_1_14:95904955-95916441:-|nuORF	ENST00000555759.1_1_14:95904955-95916441:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.2636596560478	2	486.292894	970.571235	1.9923	0.00096886	3.341	0.0016247	5.3333	0.0025936	486.29269486967604	42.227	0.25462	43.567	43.413	43.667	1.3399					11	7	2	0	0	0	2.3239	1	17741	17741		5.2307	0	1	486120			27553	7299	13615	13672	31589	31589					0.08477190125222478
QVKTWYQNR	9	Unmodified	_QVKTWYQNR_					0	0	0		ENSG00000131668|ENST00000253968|BARX1;nc|ENSG00000131668|Q9HBU1-2|BARX1;ENSG00000043039|ENST00000281437|BARX2;ENSG00000125492|ENST00000263610|BARHL1;ENSG00000143032|ENST00000370445|BARHL2	ENSG00000131668|ENST00000253968|BARX1	ENSG00000131668|ENST00000253968|BARX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2162963747978	3	408.215761	1221.62546	-0.79018	-0.00032257	2.0904	0.00085332	1.3002	0.00053075	408.21673392831434	12.914	0.55477	12.914	12.746	13.301	0					59	17	5	0	0	0	0.28372	1	5375	5375		26.268	26.268	1	17600000			27554	2500	13616	13673	31590	31590					0.02350737486131038
QVLERGQP	8	Unmodified	_QVLERGQP_					0	0	0		chr14:105477931-105478266|148|42.22|0.26|7.34|+|0|None,CRIP2|1;chr14:105477913-105478266|128|46.07|0.24|7.61|+|0|None,CRIP2|1;chr14:105477895-105478266|126|43.56|0.19|7.84|+|0|None,CRIP2|1;chr14:105477877-105478266|172|40.16|0.15|8.06|+|0|None,CRIP2|1	chr14:105477931-105478266|148|42.22|0.26|7.34|+|0|None,CRIP2|1	chr14:105477931-105478266|148|42.22|0.26|7.34|+|0|None,CRIP2|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	309.5242492556572	3	309.506653	925.498129	0.12279	3.8004E-05	-2.644	-0.00081833	-2.5212	-0.00078032	309.50589542877566	24.198	0.3721	25.439	25.206	25.578	1.241					23	11	3	0	0	0	2.3239	1	10109	10109		6.2058	0.47393	1	1532000			27555	200	13617	13674	31591	31591					0.03240016611948704
QVLFEFWP	8	Unmodified	_QVLFEFWP_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1914550662041	2	533.273835	1064.53312	1.3919	0.00074226	4.1344	0.0022047	5.5262	0.002947	533.276006628273	32.95	0.12735	32.95	32.844	32.971	0					5	3	2	0	0	0	2.3239	1	13765	13765		0	0	1	353710	+		27556	9126	13618	13675	31592	31592					0.0034325941990118736
QVLGAHFNPQV	11	Unmodified	_QVLGAHFNPQV_					0	0	0		ENST00000478406.5_1_1:227170215-227170924:+|nuORF	ENST00000478406.5_1_1:227170215-227170924:+|nuORF	ENST00000478406.5_1_1:227170215-227170924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.3231689333916	2	605.32238	1208.63021	2.4988	0.0015126	0.24275	0.00014694	2.7415	0.0016595	605.3229463495052	88.216	0.55814	88.45	88.133	88.691	0.23471					25	17	2	0	0	0	0.91768	1	37028	37028		8.7454	0.58988	1	826290			27557	6803	13619	13676	31593	31593					0.034236216288718424
QVLIDFDCY	9	Unmodified	_QVLIDFDCY_					0	0	0			REV__NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	REV__NUP133|p.G909Efs*40|1|0.06|ENSG00000069248|chr1:229460729-229460730|-/ATTCT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	557.7566406130791	2	558.257525	1114.5005	4.6401	0.0025904	-1.6542	-0.00092344	2.986	0.001667	558.2568676007239	88.642	0.29019	90.089	89.889	90.179	1.4467					11	8	2	0	0	0	0.11684	1	37367	37367		7.9102	0	1	372180	+		27558	8709	13620	13677	31594	31594					-0.05217315765275998
QVLIRFHIQR	10	Unmodified	_QVLIRFHIQR_					0	0	0		nc|ENSG00000227471|C9JRZ8|AKR1B15;ENSG00000198074|ENST00000359579|AKR1B10;ENSG00000227471|ENST00000457545|AKR1B15	nc|ENSG00000227471|C9JRZ8|AKR1B15	nc|ENSG00000227471|C9JRZ8|AKR1B15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2678100466728	3	437.266568	1308.77787	1.9552	0.00085494	2.0894	0.00091364	4.0446	0.0017686	437.2672560857812	37.488	0.34004	37.793	37.626	37.966	0.30497					18	12	2	0	0	0	0.8521	1	15747	15747		6.6304	2.754	1	1214200			27559	5040	13621	13678	31595	31595					0.13583557953529635
QVLKVCANH	9	Unmodified	_QVLKVCANH_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;RGPD3|p.Y1334Sfs*11|1|0.08|ENSG00000153165|chr2:106423966-106423966|T/-|frameshift_variant;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	506.3509094119072	2	506.273844	1010.53313	2.1521	0.0010895	1.1856	0.00060025	3.3377	0.0016898	506.274552684771	51.392	0.21607	51.392	51.292	51.508	0					12	6	2	0	0	0	0.08828	1	21427	21427		28.487	2.1456	1	754580			27560	601;3349;4965	13622	13679	31596	31596					0.02828936148239336
QVLKVCANH	9	Unmodified	_QVLKVCANH_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;RGPD3|p.Y1334Sfs*11|1|0.08|ENSG00000153165|chr2:106423966-106423966|T/-|frameshift_variant;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	506.3508788943291	2	506.273844	1010.53313	2.0519	0.0010388	-0.27825	-0.00014087	1.7736	0.00089794	506.27376441456164	50.997	0.31428	51.326	51.166	51.48	0.32824					19	9	3	0	0	0	0.08828	1	21334	21334		28.487	2.1456	1	1078000			27561	601;3349;4965	13622	13679	31597	31597					0.02828936148239336
QVLKVCANH	9	Unmodified	_QVLKVCANH_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;RGPD3|p.Y1334Sfs*11|1|0.08|ENSG00000153165|chr2:106423966-106423966|T/-|frameshift_variant;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.3512451052666	2	506.273844	1010.53313	2.5632	0.0012977	0.11967	6.0584E-05	2.6829	0.0013583	506.27385168768785	49.759	0.34385	51.151	50.948	51.292	1.3911					19	10	2	0	0	0	0.08828	1	20780	20780		28.487	2.1456	1	4511300			27562	601;3349;4965	13622	13679	31598	31598					0.02828936148239336
QVLKVCANH	9	Unmodified	_QVLKVCANH_					0	0	0		ENSG00000183054|ENST00000329516|RGPD6;ENSG00000169629|ENST00000302558|RGPD8;ENSG00000015568|ENST00000016946|RGPD5;RGPD3|p.Y1334Sfs*11|1|0.08|ENSG00000153165|chr2:106423966-106423966|T/-|frameshift_variant;nc|ENSG00000187627|P0DJD0|RGPD1;ENSG00000187627|ENST00000641458|RGPD1;ENSG00000185304|ENST00000398146|RGPD2;ENSG00000153165|ENST00000409886|RGPD3;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6;ENSG00000153201|ENST00000283195|RANBP2;ENSG00000196862|ENST00000408999|RGPD4	ENSG00000183054|ENST00000329516|RGPD6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.3510314822197	2	506.273844	1010.53313	1.7697	0.00089598	-3.1715	-0.0016056	-1.4017	-0.00070966	506.27416311346184	49.262	0.52939	51.239	51.008	51.537	1.9772					47	16	4	0	0	0	0.08828	1	20585	20585		28.487	2.1456	1	6397500			27563	601;3349;4965	13622	13679	31599	31599					0.02828936148239336
QVLLDLASL	9	Unmodified	_QVLLDLASL_					0	0	0		nc|ENSG00000138735|O76074-2|PDE5A;ENSG00000138735|ENST00000354960|PDE5A	nc|ENSG00000138735|O76074-2|PDE5A	nc|ENSG00000138735|O76074-2|PDE5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2932006716728	2	486.292225	970.569897	1.9855	0.00096551	-1.8883	-0.00091828	0.097134	4.7236E-05	486.2912737268346	70.193	0.82406	70.516	70.224	71.048	0.32223					68	26	4	0	0	0	0.15635	1	29485	29485		37.974	0	1	48941000			27564	2851	13623	13680	31600	31600					0.08343511245789159
QVLLNVLTL	9	Unmodified	_QVLLNVLTL_					0	0	0		ENSG00000131067|ENST00000336431|GGT7	ENSG00000131067|ENST00000336431|GGT7	ENSG00000131067|ENST00000336431|GGT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.8219482302666	2	506.823692	1011.63283	2.0615	0.0010448	-0.19624	-9.9458E-05	1.8653	0.00094538	506.8235297624365	75.075	0.47057	75.075	74.904	75.374	0					33	14	3	0	0	0	0.39674	1	31222	31222		27.629	0	1	3829100			27565	2478	13624	13681	31601	31601					0.1274807703384795
QVLSLKTSL	9	Unmodified	_QVLSLKTSL_					0	0	0		ENST00000457633.1_1_2:179315316-179315532:-|nuORF	ENST00000457633.1_1_2:179315316-179315532:-|nuORF	ENST00000457633.1_1_2:179315316-179315532:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.8064758181572	2	494.8055	987.596446	1.2623	0.00062459	-0.45872	-0.00022698	0.80356	0.00039761	494.8053604356615	70.662	0.42532	70.662	70.449	70.875	0					41	13	4	0	0	0	0.27148	1	29503	29503		26.884	3.7352	1	18102000			27566	6649	13625	13682	31602	31602					0.10215200137145075
QVLSLKTSL	9	Unmodified	_QVLSLKTSL_					0	0	0		ENST00000457633.1_1_2:179315316-179315532:-|nuORF	ENST00000457633.1_1_2:179315316-179315532:-|nuORF	ENST00000457633.1_1_2:179315316-179315532:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.8054992556572	2	494.8055	987.596446	1.8887	0.00093453	-1.9002	-0.00094023	-0.011505	-5.6928E-06	494.8045892827023	70.195	0.39019	70.517	70.288	70.678	0.32224					41	12	4	0	0	0	0.30098	1	29425	29425		25.399	0.72543	1	24566000			27567	6649	13625	13682	31603	31603					0.10215200137145075
QVLTRAQLLER	11	Unmodified	_QVLTRAQLLER_					0	0	0		tr|A0A553SF44|A0A553SF44_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_08200PE=4SV=1	tr|A0A553SF44|A0A553SF44_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_08200PE=4SV=1	tr|A0A553SF44|A0A553SF44_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_08200PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	442.3179809451103	3	442.933254	1325.77793	3.4584	0.0015319	-1.1719	-0.00051907	2.2865	0.0010128	442.9329346000741	82.661	1.7238	83.874	83.068	84.792	1.2125					110	54	3	0	0	0	0.14606	1	34562	34562		0.50596	0	1	1900400			27568	16039	13626	13683	31604	31604					0.12807513162852047
QVLVKLWRKR	10	Unmodified	_QVLVKLWRKR_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|57|1|sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|57|1|sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|57|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	332.1748229861259	4	332.218666	1324.84556	-1.5448	-0.0005132	3.7787	0.0012554	2.2339	0.00074216	332.4700529485925	59.307	0.38116	59.307	59.068	59.449	0					13	11	2	0	0	0	0.12561	1	24644	24644		0.15932	0.01943	1	1058600			27569	7737	13627	13684	31605	31605					0.19613007884322542
QVMRGRRL	8	Unmodified	_QVMRGRRL_					0	0	0			REV__ENST00000593152.6_1_18:43677808-43678015:-|nuORF	REV__ENST00000593152.6_1_18:43677808-43678015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3002502322197	2	508.300727	1014.5869	3.8957	0.0019802	-3.1496	-0.0016009	0.74611	0.00037925	508.2991338214867	90.682	0.35343	92.048	91.864	92.217	1.366					17	10	2	0	0	0	0.89008	1	38183	38183		2.5775	0.27475	1	942270	+		27570	14081	13628	13685	31606	31606					0.08019153370628374
QVNALGLEV	9	Unmodified	_QVNALGLEV_					0	0	0			REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7676269412041	2	471.766374	941.518196	3.0483	0.0014381	0.26037	0.00012283	3.3086	0.0015609	471.76644663510984	62.355	0.31301	63.773	63.619	63.932	1.4177					22	9	3	0	0	0	0.069258	1	26128	26128		60.39	10.721	1	1843200	+		27571	8515	13629	13686	31607	31607					0.04509767551905952
QVNALGLEV	9	Unmodified	_QVNALGLEV_					0	0	0			REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7674133181572	2	471.766374	941.518196	3.0399	0.0014341	0.49173	0.00023198	3.5316	0.0016661	471.76610416368834	61.779	0.31406	63.736	63.594	63.908	1.9571					21	9	3	0	0	0	0.11478	1	25927	25927		44.407	0	1	1565800	+		27572	8515	13629	13686	31608	31608					0.04509767551905952
QVNALGLEV	9	Unmodified	_QVNALGLEV_					0	0	0			REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	471.766374	941.518196	2.4762	0.0011682	4.0248	0.0018988	6.501	0.003067	471.76761022230403	64.011	0.1842	64.011	63.862	64.046	0	0.16833	0.0032443	NaN	60.39	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	332970	+		27573	8515	13629	13686							0.04509767551905952
QVNALGLEV	9	Unmodified	_QVNALGLEV_					0	0	0			REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	471.766374	941.518196	2.6372	0.0012441	1.7611	0.00083081	4.3983	0.002075	471.76610729099764	63.521	0.18675	63.85	63.725	63.912	0.32899	0.007635	0.0011084	NaN	60.39	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	401740	+		27574	8515	13629	13686							0.04509767551905952
QVNALGLEV	9	Unmodified	_QVNALGLEV_					0	0	0			REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	REV__SCN4A|p.L707Wfs*88|1|0.09|ENSG00000007314|chr17:63957419-63957419|G/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	471.766374	941.518196	3.0399	0.0014341	0.49173	0.00023198	3.5316	0.0016661	471.76610416368834	61.779	0.31406	63.736	63.594	63.908	1.9571	-0.10631	-8.9235E-05	NaN	60.39	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1565800	+		27575	8515	13629	13686							0.04509767551905952
QVNPVLLTL	9	Unmodified	_QVNPVLLTL_					0	0	0		nc|ENSG00000085185|Q5H9F3-4|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;ENSG00000085185|ENST00000540052|BCORL1	nc|ENSG00000085185|Q5H9F3-4|BCORL1	nc|ENSG00000085185|Q5H9F3-4|BCORL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8094360232353	2	498.808042	995.601532	3.483	0.0017373	-0.47919	-0.00023902	3.0038	0.0014983	498.80727703059404	73.852	0.40768	75.17	74.935	75.342	1.318					22	12	2	0	0	0	0.036104	1	30999	30999		78.149	17.76	1	1957700			27576	1058	13630	13687	31609	31609					0.1035550399976728
QVNPVLLTL	9	Unmodified	_QVNPVLLTL_					0	0	0		nc|ENSG00000085185|Q5H9F3-4|BCORL1;nc|ENSG00000085185|Q5H9F3-1|BCORL1;ENSG00000085185|ENST00000540052|BCORL1	nc|ENSG00000085185|Q5H9F3-4|BCORL1	nc|ENSG00000085185|Q5H9F3-4|BCORL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8092529177666	2	498.808042	995.601532	2.4724	0.0012332	-0.1159	-5.7813E-05	2.3565	0.0011754	498.80800814802694	73.315	0.34246	75.125	74.957	75.3	1.8101					27	10	4	0	0	0	0.031145	1	30751	30751		85.357	37.011	1	1923300			27577	1058	13630	13687	31610	31610					0.1035550399976728
QVQKRPLN	8	Unmodified	_QVQKRPLN_					0	0	0			REV__ENSG00000180884|ENST00000404801|ZNF792	REV__ENSG00000180884|ENST00000404801|ZNF792	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7927734255791	2	491.793258	981.571963	2.5245	0.0012415	-3.5416	-0.0017417	-1.0172	-0.00050023	491.7913888602004	77.909	0.64018	79.19	78.823	79.464	1.2809					39	20	3	0	0	0	0.88587	1	32698	32698		5.2307	0	1	6515000	+		27578	11305	13631	13688	31611	31611					0.08043984774258206
QVQTHVMKK	9	Unmodified	_QVQTHVMKK_					0	0	0			REV__ENST00000424148.1_1_11:1618612-1618831:+|nuORF	REV__ENST00000424148.1_1_11:1618612-1618831:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	549.8049804568291	2	549.808051	1097.60155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.602	1	10.685	10.185	11.185	0.082325								0	0	0	0.40883	1	4398	4398		7.9102	0	1		+		27579	12990	13632	13689	31612	31612					0.056651807281014044
QVRLAEST	8	Unmodified	_QVRLAEST_					0	0	0			REV__ENST00000552478.5_1_12:56332981-56334773:+|nuORF	REV__ENST00000552478.5_1_12:56332981-56334773:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2493469119072	2	452.248349	902.482145	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.55	104.05	105.05	0.056801								0	0	0	1.0178	1	44076	44076		2.3027	0	1		+		27580	13839	13633	13690	31613	31613					0.027003103750416813
QVRLASLQS	9	Unmodified	_QVRLASLQS_					0	0	0		ENST00000487455.1_1_7:150065323-150066789:+|nuORF;chr7:150369697-150371231|97|14.3|0.04|8.32|+|0|None,REPIN1|1;chr7:150369697-150371228|158|13.97|0.13|6.79|+|0|None,REPIN1|1	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2910339236259	2	501.290548	1000.56654	2.0378	0.0010215	-0.088798	-4.4513E-05	1.949	0.00097702	501.2901365748803	82.17	0.66705	82.17	81.701	82.368	0					33	21	3	0	0	0	0.84195	1	34279	34279		1.6526	0	1	2451300			27581	6879	13634	13691	31614	31614					0.06628261191792717
QVRLASLQSE	10	Unmodified	_QVRLASLQSE_					0	0	0		ENST00000487455.1_1_7:150065323-150066789:+|nuORF;chr7:150369697-150371231|97|14.3|0.04|8.32|+|0|None,REPIN1|1;chr7:150369697-150371228|158|13.97|0.13|6.79|+|0|None,REPIN1|1	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	376.8577758669853	3	377.543655	1129.60914	2.4641	0.00093032	3.1102	0.0011742	5.5743	0.0021046	377.5449350386405	86.046	0.39095	86.298	86.1	86.491	0.25227					20	12	2	0	0	0	0.12549	1	35964	35964		1.4551	0.59074	1	1087000			27582	6879	13635	13692	31615	31615					0.04951611529349975
QVRQEQLRLL	10	Unmodified	_QVRQEQLRLL_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8832885622978	2	641.883136	1281.75172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.039	1	82.039	81.539	82.539	0								0	0	0	0.66185	1	34175	34175		1.3295	0	1		+		27583	11614	13636	13693	31616	31616					0.12211243991396259
QVRRDLLKHKR	11	Unmodified	_QVRRDLLKHKR_					0	0	0		ZNF425|p.H632Pfs*10|1|0.04|ENSG00000204947|chr7:149103976-149103976|T/-|frameshift_variant;ENSG00000204947|ENST00000378061|ZNF425	ZNF425|p.H632Pfs*10|1|0.04|ENSG00000204947|chr7:149103976-149103976|T/-|frameshift_variant	ZNF425|p.H632Pfs*10|1|0.04|ENSG00000204947|chr7:149103976-149103976|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.9714233279228	3	483.635542	1447.8848	3.3753	0.0016324	-1.0915	-0.0005279	2.2838	0.0011045	483.63486318839637	87.899	0.77382	88.134	87.793	88.567	0.23471					34	24	2	0	0	0	1.0402	1	36862	36862		0.094841	0	1	545230			27584	5167	13637	13694	31617	31617					0.17877108167886036
QVRTHQETL	9	Unmodified	_QVRTHQETL_					0	0	0		nc|nan|Q8ND61-2|C3orf20;ENSG00000131379|ENST00000253697|C3orf20	nc|nan|Q8ND61-2|C3orf20	nc|nan|Q8ND61-2|C3orf20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2970458865166	2	556.296362	1110.57817	1.2368	0.00068802	-1.5187	-0.00084483	-0.28189	-0.00015682	556.2959645047775	48.687	0.27626	50.075	49.925	50.202	1.388					16	8	2	0	0	0	0.11643	1	20384	20384		43.858	0.085901	1	1414300			27585	2486	13638	13695	31618	31618					0.027304582151373324
QVSSCCLH	8	Unmodified	_QVSSCCLH_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1;PKD2L1|p.F256Lfs*26|1|0.07|ENSG00000107593|chr10:100297573-100297574|-/C|frameshift_variant;nc|ENSG00000107593|Q9P0L9-4|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MSMS	GG20161007_CRH_Patient100_W632_01	3	438.6884338259697	2	438.688755	875.362958	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8107	1	10.461	9.9612	10.961	0.65058								0	0	0	1.0178	1	4079	4079		2.8892	0	1				27586	1603	13639	13696	31619	31619					-0.07970922845686346
QVSTLLTLL	9	Unmodified	_QVSTLLTLL_					0	0	0		ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3094055056572	2	494.307875	986.601197	2.9638	0.001465	0.52559	0.0002598	3.4894	0.0017248	494.3078475430141	82.488	0.39793	84.158	84.049	84.447	1.67					26	12	3	0	0	0	0.044893	1	34652	34652		71.922	14.451	1	4384100			27587	3162	13640	13697	31620	31620					0.10736084279915303
QVSTLLTLL	9	Unmodified	_QVSTLLTLL_					0	0	0		ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	494.307875	986.601197	2.0903	0.0010333	-0.13404	-6.6257E-05	1.9563	0.00096701	494.30763939557636	84.509	0.28381	84.509	84.399	84.683	0	0.20881	-0.00020243	NaN	71.922	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	971450			27588	3162	13640	13697							0.10736084279915303
QVSTLLTLL	9	Unmodified	_QVSTLLTLL_					0	0	0		ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	ENSG00000146826|ENST00000316937|TRAPPC14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	494.307875	986.601197	3.0973	0.001531	-1.9222	-0.00095015	1.1751	0.00058087	494.30662610167695	84.027	0.34106	84.288	84.096	84.437	0.26083	-0.011516	-0.0019702	NaN	71.922	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	540870			27589	3162	13640	13697							0.10736084279915303
QVTDAPLEL	9	Unmodified	_QVTDAPLEL_					0	0	0			REV__ENSG00000115919|ENST00000264170|KYNU	REV__ENSG00000115919|ENST00000264170|KYNU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2695800662041	2	493.263665	984.512776	1.6061	0.00079224	2.7858	0.0013741	4.3919	0.0021664	493.2646799344906	54.762	0.47104	56.167	56.027	56.499	1.4048					27	15	2	0	0	0	0.32838	1	22927	22927		24.021	6.934	1	2766400	+		27590	9461	13641	13698	31621	31621					0.019900439694083616
QVTNRGLRARR	11	Unmodified	_QVTNRGLRARR_					0	0	0			REV__ENST00000322313.8_1_2:128458821-128459556:-|nuORF	REV__ENST00000322313.8_1_2:128458821-128459556:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	442.3178588747978	3	442.932359	1325.77525	2.8547	0.0012645	1.1172	0.00049485	3.9719	0.0017593	442.93294824599394	83.496	1.7203	83.766	83.368	85.088	0.27029					96	54	3	0	0	0	0.14606	1	35363	35363		0.40827	0.24894	1	1790200	+		27591	12412	13642	13699	31622	31622					0.12539102548566916
QVTNRGLRARR	11	Unmodified	_QVTNRGLRARR_					0	0	0			REV__ENST00000322313.8_1_2:128458821-128459556:-|nuORF	REV__ENST00000322313.8_1_2:128458821-128459556:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	442.3176147341728	3	442.932359	1325.77525	4.0352	0.0017873	-1.0007	-0.00044325	3.0345	0.0013441	442.9321042679565	81.915	0.47029	83.585	83.201	83.671	1.67					27	14	2	0	0	0	0.14606	1	34340	34340		0.40827	0	1	782910	+		27592	12412	13642	13699	31623	31623					0.12539102548566916
QVVEQIVRIIF	11	Unmodified	_QVVEQIVRIIF_					0	0	0		tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	tr|A0A553SJT5|A0A553SJT5_NIACIPolysaccharidebiosynthesisproteinOS=NialliacirculansOX=1397GN=CEQ21_17455PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4125854372978	2	672.405912	1342.79727	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.916	1	84.586	84.086	85.086	1.67								0	0	0	0.63775	1	34783	34783		5.2969	3.4526	1				27593	16262	13643	13700	31624	31624					0.13958469453791622
QVVHKLKDI	9	Unmodified	_QVVHKLKDI_					0	0	0			REV__ENSG00000179399|ENST00000377067|GPC5	REV__ENSG00000179399|ENST00000377067|GPC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3304931521416	2	540.332216	1078.64988	1.4108	0.00076229	-1.7112	-0.00092459	-0.30037	-0.0001623	540.3312259445505	70.558	0.78256	70.88	70.647	71.429	0.32223					63	24	3	0	0	0	0.77526	1	29518	29518		4.3292	0.73274	1	2526700	+		27594	11276	13644	13701	31625	31625					0.1136999763964468
QVVIYLRK	8	Unmodified	_QVVIYLRK_					0	0	0		nc|ENSG00000151490|Q16827-5|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	510.6348449587822	2	509.824027	1017.6335	2.8274	0.0014415	-3.1962	-0.0016295	-0.36876	-0.000188	509.8221089010055	91.602	0.451	91.792	91.498	91.949	0.19042					33	13	3	0	0	0	2.3239	1	38422	38422		0.69038	0	1	2573500			27595	3291	13645	13702	31626	31626					0.12538916473545214
QVVQYKDY	8	Unmodified	_QVVQYKDY_					0	0	0			REV__ENSG00000105851|ENST00000496166|PIK3CG	REV__ENSG00000105851|ENST00000496166|PIK3CG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.7632934451103	2	521.763832	1041.51311	2.1036	0.0010976	-3.0725	-0.0016031	-0.96892	-0.00050555	521.7622923946454	75.358	0.34774	75.358	75.154	75.502	0					17	10	2	0	0	0	0.77833	1	31357	31357		23.148	0	1	1279600	+		27596	9192	13646	13703	31627	31627					-0.00598536310712916
QVVRAMVPL	9	Unmodified	_QVVRAMVPL_					0	0	0		tr|A0A553SHA7|A0A553SHA7_NIACIElongationfactorGOS=NialliacirculansOX=1397GN=fusAPE=3SV=1	tr|A0A553SHA7|A0A553SHA7_NIACIElongationfactorGOS=NialliacirculansOX=1397GN=fusAPE=3SV=1	tr|A0A553SHA7|A0A553SHA7_NIACIElongationfactorGOS=NialliacirculansOX=1397GN=fusAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9831115603447	3	338.203917	1011.58992	-0.22358	-7.5617E-05	-3.5091	-0.0011868	-3.7327	-0.0012624	338.202058968123	28.202	0.392	29.481	29.184	29.576	1.2789					20	12	2	0	0	0	0.11909	1	11824	11824		2.4985	0.21571	1	293550			27597	16144	13647	13704	31628	31628					0.08458983704770162
QVVRRRNVP	9	Unmodified	_QVVRRRNVP_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3434326052666	2	562.343981	1122.67341	1.1505	0.00064699	-1.5179	-0.0008536	-0.3674	-0.00020661	562.3427767084524	70.133	1.1677	70.133	69.675	70.842	0					57	37	2	0	0	0	0.85019	1	29407	29407		0.52476	0	1	1274100	+		27598	14461	13648	13705	31629	31629					0.11697856196815337
QVVRRRNVP	9	Unmodified	_QVVRRRNVP_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3434936404228	2	562.343981	1122.67341	1.2031	0.00067655	-1.0233	-0.00057545	0.17978	0.0001011	562.3431565799003	70.004	1.3335	70.326	69.344	70.678	0.32224					80	42	3	0	0	0	0.85019	2	29335	29335;29391		0.52476	0	1	1666400	+		27599	14461	13648	13705	31630;31631	31630					0.11697856196815337
QVVRRRNVP	9	Unmodified	_QVVRRRNVP_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3452026247978	2	562.343981	1122.67341	1.8758	0.0010548	-0.053188	-2.991E-05	1.8226	0.0010249	562.3436917925029	72.52	2.0309	72.845	71.85	73.881	0.32494					136	64	3	0	0	0	0.85019	1	30723	30723		0.52476	0	1	7864900	+		27600	14461	13648	13705	31632	31632					0.11697856196815337
QVVRRRNVP	9	Unmodified	_QVVRRRNVP_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3444702029228	2	562.343981	1122.67341	2.3852	0.0013413	-0.30911	-0.00017382	2.0761	0.0011675	562.3437694890226	73.779	1.3866	74.104	73.881	75.267	0.32494					94	43	3	0	0	0	0.85019	1	30868	30868		0.52476	0	1	2032100	+		27601	14461	13648	13705	31633	31633					0.11697856196815337
QVYNKCWKF	9	Unmodified	_QVYNKCWKF_					0	0	0		ENSG00000085063|ENST00000642928|CD59;nc|ENSG00000284969|P13987-2|CD59	ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.2737304568291	3	405.870826	1214.59065	0.62672	0.00025437	1.5959	0.00064774	2.2227	0.00090211	405.8710357137901	28.668	1.1564	29.95	29.429	30.585	1.2825					46	37	2	0	0	0	0.11837	1	12041	12041		2.4985	0.90621	1	1673300			27602	1057	13649	13706	31634	31634					-0.008062216462121796
QWDWCRECAK	10	Unmodified	_QWDWCRECAK_					0	0	0			REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	662.7830078005791	2	662.781707	1323.54886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.238	1	44.238	43.738	44.738	0								0	0	0	0.66052	1	18511	18511		3.5965	0.60125	1		+		27603	13818	13650	13707	31635	31635					-0.09997145397005625
QWDWCRECAK	10	Unmodified	_QWDWCRECAK_					0	0	0			REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	662.7827636599541	2	662.781707	1323.54886	1.5679	0.0010392	2.0284	0.0013444	3.5963	0.0023836	662.7828793937997	39.644	0.46042	39.956	39.704	40.164	0.31263					20	14	2	0	0	0	0.88022	1	16625	16625		3.5965	0.31518	1	394740	+		27604	13818	13650	13707	31636	31636					-0.09997145397005625
QWDWCRECAK	10	Unmodified	_QWDWCRECAK_					0	0	0			REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	REV__ENST00000549332.1_1_5:145889637-145890202:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	662.7842895388603	2	662.781707	1323.54886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.674	1	38.983	38.483	39.483	0.30857								0	0	0	0.66052	1	16270	16270		3.5965	0.60125	1		+		27605	13818	13650	13707	31637	31637					-0.09997145397005625
QWEESPPLSA	10	Unmodified	_QWEESPPLSA_					0	0	0		ENSG00000196498|ENST00000405201|NCOR2;nc|ENSG00000196498|Q9Y618-4|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	ENSG00000196498|ENST00000405201|NCOR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.7712890505791	2	572.269478	1142.5244	1.8337	0.0010494	3.1657	0.0018116	4.9994	0.002861	572.2712393696809	72.483	1.2653	72.808	71.914	73.179	0.32494					74	36	4	0	0	0	0.89803	1	30129	30129		1.3295	0.5359	1	6267800			27606	4942	13651	13708	31638	31638					-0.04115759007231645
QWGEVGGPGV	10	Unmodified	_QWGEVGGPGV_					0	0	0		ENST00000600178.5_1_19:39307593-39308076:-|nuORF	ENST00000600178.5_1_19:39307593-39308076:-|nuORF	ENST00000600178.5_1_19:39307593-39308076:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1604797244072	3	329.162775	984.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.84	1	99.84	99.34	100.34	0								0	0	0	0.66218	1	41793	41793		0.77653	0.31819	1				27607	7535	13652	13709	31639	31639					-0.026359761419939787
QWIIKPRQIIC	11	Unmodified	_QWIIKPRQIIC_					0	0	0			REV__ENST00000511884.6_2_4:31145288-31145360:+|nuORF	REV__ENST00000511884.6_2_4:31145288-31145360:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4120361208916	2	699.407932	1396.80131	2.8079	0.0019638	-0.78868	-0.00055161	2.0192	0.0014122	699.4062851927833	87.274	1.3786	87.274	86.955	88.334	0					73	49	3	0	0	0	1.0393	1	36605	36605		0.35063	0	1	5976500	+		27608	13575	13653	13710	31640	31640					0.11878235675885662
QWIIKPRQIIC	11	Unmodified	_QWIIKPRQIIC_					0	0	0			REV__ENST00000511884.6_2_4:31145288-31145360:+|nuORF	REV__ENST00000511884.6_2_4:31145288-31145360:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	699.4109985232353	2	699.407932	1396.80131	2.5356	0.0017734	0.50787	0.00035521	3.0434	0.0021286	699.4080920657195	87.117	1.2908	87.36	87.195	88.486	0.24387					86	43	3	0	0	0	1.0393	1	36693	36693		0.35063	0	1	3164400	+		27609	13575	13653	13710	31641	31641					0.11878235675885662
QWKTVRQKKTR	11	Unmodified	_QWKTVRQKKTR_					0	0	0			REV__ENSG00000188827|ENST00000294008|SLX4	REV__ENSG00000188827|ENST00000294008|SLX4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	729.9379150271416	2	729.936234	1457.85791	2.5876	0.0018888	-1.5511	-0.0011322	1.0365	0.0007566	729.9350352674447	89.038	1.2216	89.038	88.304	89.526	0					87	38	3	0	0	0	1.0391	1	37176	37176		1.1933	0.84271	1	1478000	+		27610	11589	13654	13711	31642	31642					0.14729999556698203
QWKTVRQKKTR	11	Unmodified	_QWKTVRQKKTR_					0	0	0			REV__ENSG00000188827|ENST00000294008|SLX4	REV__ENSG00000188827|ENST00000294008|SLX4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	729.936234	1457.85791	4.2882	0.0031301	-0.15689	-0.00011452	4.1313	0.0030156	729.9367818221996	87.774	0.40908	88.866	88.612	89.021	1.0918	-0.10123	0.0011018	NaN	1.1933	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	804410	+		27611	11589	13654	13711							0.14729999556698203
QWKTVRQKKTR	11	Unmodified	_QWKTVRQKKTR_					0	0	0			REV__ENSG00000188827|ENST00000294008|SLX4	REV__ENSG00000188827|ENST00000294008|SLX4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	729.936234	1457.85791	4.0726	0.0029728	-1.2138	-0.00088602	2.8588	0.0020867	729.9353945132556	87.44	0.37605	88.935	88.734	89.11	1.4953	-0.032016	-0.00044119	NaN	1.1933	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745510	+		27612	11589	13654	13711							0.14729999556698203
QWPPDPPLHF	10	Unmodified	_QWPPDPPLHF_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1;ENST00000466465.5_1_2:46607308-46611796:+|nuORF	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3084594607353	2	617.306198	1232.59784	2.4839	0.0015333	1.5141	0.00093464	3.9979	0.0024679	617.307333893627	65.374	3.3676	66.773	64.424	67.792	1.3989					273	108	3	0	0	0	0.047918	19	27164	26752;26799;26850;26903;26960;27010;27057;27108;27164;27213;27270;27319;27460;27517;27620;27669;27722;27776;27830		85.357	53.051	1	15945000			27613	1945	13655	13712	31643;31644;31645;31646;31647;31648;31649;31650;31651;31652;31653;31654;31655;31656;31657;31658;31659;31660;31661	31651					-0.009151657741313102
QWPPDPPLHF	10	Unmodified	_QWPPDPPLHF_					0	0	0		ENSG00000116016|ENST00000263734|EPAS1;ENST00000466465.5_1_2:46607308-46611796:+|nuORF	ENSG00000116016|ENST00000263734|EPAS1	ENSG00000116016|ENST00000263734|EPAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3079711794853	2	617.306198	1232.59784	1.8727	0.001156	1.5997	0.00098752	3.4724	0.0021436	617.307375564561	64.827	3.52	66.755	64.39	67.91	1.928					288	112	3	0	0	0	0.047918	17	26848	26551;26617;26685;26747;26800;26848;26899;26952;27007;27055;27108;27299;27445;27511;27559;27605;27668		85.357	56.275	1	12047000			27614	1945	13655	13712	31662;31663;31664;31665;31666;31667;31668;31669;31670;31671;31672;31673;31674;31675;31676;31677;31678	31667					-0.009151657741313102
QWPQPDKPMFF	11	Unmodified	_QWPQPDKPMFF_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	710.8406249880791	2	710.839548	1419.66454	2.5542	0.0018156	-0.61965	-0.00044047	1.9346	0.0013752	710.8392079145355	64.343	0.48816	65.75	65.497	65.985	1.4071					50	15	4	0	0	0	0.030359	2	26955	26955;27002		79.596	58.059	1	4741100			27615	477	13656	13713	31679;31680	31679					-0.028502982745521876
QWPQPDKPMFF	11	Unmodified	_QWPQPDKPMFF_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.8408080935478	2	710.839548	1419.66454	2.2606	0.0016069	-0.57714	-0.00041026	1.6834	0.0011966	710.8390303109002	63.846	0.52492	65.774	65.425	65.95	1.928					48	16	4	0	0	0	0.030359	2	26743	26743;26797		79.596	63.447	1	5215500			27616	477	13656	13713	31681;31682	31681					-0.028502982745521876
QWPWQASLQF	10	Unmodified	_QWPWQASLQF_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-4|TMPRSS3;nc|ENSG00000160183|P57727-2|TMPRSS3;ENST00000474596.5_1_21:43792873-43809176:-|nuORF;chr21:42383133-42383970|144|15.15|0.07|7.7|-|0|None,TMPRSS3|1;ENST00000476848.5_1_21:43803140-43803371:-|nuORF	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.8206664919853	2	645.81693	1289.61931	5.4304	0.0035071	-0.55102	-0.00035586	4.8794	0.0031512	645.8166793572876	88.616	0.64564	89.672	89.24	89.886	1.0562					32	19	2	0	0	0	0.14401	1	37346	37346		56.177	40.929	1	840350			27617	253	13657	13714	31683	31683					-0.013917807453935893
QWPWQASLQF	10	Unmodified	_QWPWQASLQF_					0	0	0		nc|ENSG00000160183|P57727-3|TMPRSS3;chr21:42390031-42395324|398|16.36|0.59|4.79|-|ENST00000398405|TMPRSS3,TMPRSS3;ENSG00000160183|ENST00000644384|TMPRSS3;chr21:42395658-42395942|360|11.53|0.29|5.32|-|ENST00000652415|TMPRSS3,TMPRSS3;nc|ENSG00000160183|P57727|TMPRSS3;nc|ENSG00000160183|P57727-6|TMPRSS3;nc|ENSG00000160183|P57727-4|TMPRSS3;nc|ENSG00000160183|P57727-2|TMPRSS3;ENST00000474596.5_1_21:43792873-43809176:-|nuORF;chr21:42383133-42383970|144|15.15|0.07|7.7|-|0|None,TMPRSS3|1;ENST00000476848.5_1_21:43803140-43803371:-|nuORF	nc|ENSG00000160183|P57727-3|TMPRSS3	nc|ENSG00000160183|P57727-3|TMPRSS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.8204223513603	2	645.81693	1289.61931	4.5838	0.0029603	0.23302	0.00015049	4.8168	0.0031108	645.8173194663351	88.142	0.5408	89.589	89.348	89.889	1.4467					27	16	2	0	0	0	0.12991	1	37156	37156		58.679	39.422	1	1230000			27618	253	13657	13714	31684	31684					-0.013917807453935893
QWQRRQQVFRR	11	Unmodified	_QWQRRQQVFRR_					0	0	0		ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	ENSG00000081923|ENST00000648908|ATP8B1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.9653198122978	3	529.96243	1586.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.759	1	26	25.5	26.5	1.241								0	0	0	0.63775	1	10359	10359		0.40827	0.32491	1				27619	1026	13658	13715	31685	31685					0.09550151876987911
QWRKHLKK	8	Unmodified	_QWRKHLKK_					0	0	0		ENST00000388923.4_1_6:88058592-88060190:+|nuORF	ENST00000388923.4_1_6:88058592-88060190:+|nuORF	ENST00000388923.4_1_6:88058592-88060190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3423339724541	2	562.345992	1122.67743	1.2083	0.00067949	-4.449	-0.0025019	-3.2407	-0.0018224	562.3434413282612	71.298	0.57114	71.298	70.875	71.446	0					29	17	2	0	0	0	0.89176	1	29706	29706		0.79363	0	1	409390			27620	6241	13659	13716	31686	31686					0.12099945690556524
QWRKLLKMAQL	11	Unmodified	_QWRKLLKMAQL_					0	0	0		ENST00000494558.5_1_3:150276231-150281349:+|nuORF	ENST00000494558.5_1_3:150276231-150281349:+|nuORF	ENST00000494558.5_1_3:150276231-150281349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2837402224541	3	472.28323	1413.82786	3.3013	0.0015591	0.74437	0.00035155	4.0457	0.0019107	472.28355572451534	84.851	1.6059	85.112	84.533	86.139	0.26083					93	50	3	0	0	0	1.0388	1	35520	35520		0.50596	0.051438	1	1293100			27621	6936	13660	13717	31687	31687					0.1374992456721884
QWRKLLKMAQL	11	Unmodified	_QWRKLLKMAQL_					0	0	0		ENST00000494558.5_1_3:150276231-150281349:+|nuORF	ENST00000494558.5_1_3:150276231-150281349:+|nuORF	ENST00000494558.5_1_3:150276231-150281349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2851440310478	3	472.28323	1413.82786	3.3354	0.0015752	0.53056	0.00025058	3.8659	0.0018258	472.28333069559534	87.104	1.4196	87.348	87.22	88.64	0.24387					116	47	3	0	0	0	1.0362	1	36547	36547		1.3296	0	1	4354100			27622	6936	13660	13717	31688	31688					0.1374992456721884
QWRQKGPGRKL	11	Unmodified	_QWRQKGPGRKL_					0	0	0			REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9333984255791	3	451.933588	1352.77894	2.4766	0.0011192	-1.1377	-0.00051414	1.3389	0.0006051	451.933098551888	85.54	1.3865	85.54	84.716	86.103	0					111	43	3	0	0	0	1.0393	1	35602	35602		0.094841	0	1	3321100	+		27623	8241	13661	13718	31689	31689					0.11665772322453449
QWRQKGPGRKL	11	Unmodified	_QWRQKGPGRKL_					0	0	0			REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9355041384697	3	451.933588	1352.77894	3.1235	0.0014116	-1.3979	-0.00063178	1.7255	0.00077982	451.9330334707084	85.264	1.3791	85.516	84.814	86.193	0.25227					106	43	3	0	0	0	1.0393	3	35536	35536;35690;35880		0.094841	0	1	3258700	+		27624	8241	13661	13718	31690;31691;31692	31690					0.11665772322453449
QWRQKGPGRKL	11	Unmodified	_QWRQKGPGRKL_					0	0	0			REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3954955935478	2	677.396744	1352.77894	1.5971	0.0010819	-1.772	-0.0012004	-0.17491	-0.00011848	677.3953680562546	84.546	1.1548	85.705	85.086	86.241	1.159					67	37	3	0	0	0	1.0362	1	35603	35603		1.3295	0	1	5749300	+		27625	8241	13661	13718	31693	31693					0.11665772322453449
QWRQKGPGRKL	11	Unmodified	_QWRQKGPGRKL_					0	0	0			REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9348327517509	3	451.933588	1352.77894	2.1825	0.00098634	-0.37083	-0.00016759	1.8117	0.00081876	451.93377716668147	84.549	1.375	85.708	85.118	86.493	1.159					84	45	3	0	0	0	1.0393	1	35615	35615		0.094841	0	1	4016500	+		27626	8241	13661	13718	31694	31694					0.11665772322453449
QWRQKGPGRKL	11	Unmodified	_QWRQKGPGRKL_					0	0	0			REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	REV__chr11:66437257-66437350|145|16.42|0.4|5.36|-|0|None,MRPL11|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9338561892509	3	451.933588	1352.77894	2.412	0.0010901	-1.4291	-0.00064585	0.9829	0.0004442	451.93304441998373	84.325	1.0391	85.921	85.18	86.219	1.5962					54	33	3	0	0	0	1.0393	2	35372	35372;35415		0.094841	0	1	3153200	+		27627	8241	13661	13718	31695;31696	31695					0.11665772322453449
QWRRRPALR	9	Unmodified	_QWRRRPALR_					0	0	0		ENST00000240139.9_1_8:22298692-22298875:+|nuORF	ENST00000240139.9_1_8:22298692-22298875:+|nuORF	ENST00000240139.9_1_8:22298692-22298875:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8707153201103	2	619.870697	1237.72684	1.6732	0.0010372	-1.3131	-0.00081394	0.36012	0.00022323	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	0.8462	1	32892	32892		2.0598	0.57785	1	8897800			27628	5564	13662	13719	31697	31697					0.11748653699328315
QWRSFRPRKRL	11	Unmodified	_QWRSFRPRKRL_					0	0	0			REV__ENST00000358867.10_2_11:85339667-85342779:+|nuORF	REV__ENST00000358867.10_2_11:85339667-85342779:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.6347228884697	3	510.635654	1528.88513	2.2751	0.0011617	-2.6218	-0.0013388	-0.3467	-0.00017704	510.6345053766552	92.3	1.0819	92.3	91.662	92.744	0					87	34	3	0	0	0	1.0402	1	38592	38592		0.094841	0.094841	1	1468600	+		27629	12581	13663	13720	31698	31698					0.14184527887755394
QWSRLRRRAGR	11	Unmodified	_QWSRLRRRAGR_					0	0	0			REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF	REV__ENST00000343028.8_3_12:27167184-27167292:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2859069705009	3	481.283503	1440.82868	5.4031	0.0026004	-0.091485	-4.403E-05	5.3116	0.0025564	481.28311030345975	88.282	1.2053	89.338	88.518	89.723	1.0562					102	37	3	0	0	0	1.0402	2	36956	36956;37318		0.094841	0	1	3007300	+		27630	12510	13664	13721	31699;31700	31699					0.12589900051102632
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3176147341728	2	545.317432	1088.62031	1.3153	0.00071727	-1.6383	-0.00089337	-0.32294	-0.0001761	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.89176	2	29277	29277;29375		0.79363	0	1	2013200			27631	5688	13665	13722	31701;31702	31701					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3176757693291	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.89176	1	30616	30616		0.79363	0.10326	1	5427600			27632	5688	13665	13722	31703	31703					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3174316287041	2	545.317432	1088.62031	1.5524	0.00084657	-0.29447	-0.00016058	1.258	0.00068599	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.89176	1	31002	31002		0.79363	0	1	3210400			27633	5688	13665	13722	31704	31704					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3181030154228	2	545.317432	1088.62031	1.2814	0.00069875	-1.2151	-0.00066263	0.066245	3.6124E-05	545.3170765480959	70.167	1.6732	70.489	69.344	71.017	0.32224					99	53	3	0	0	0	0.89176	2	29269	29269;29325		0.79363	0	1	2056900			27634	5688	13665	13722	31705;31706	31705					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3178588747978	2	545.317432	1088.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.792	1	73.117	72.617	73.617	0.32494								0	0	0	1.0178	1	30452	30452		0.79363	0	1				27635	5688	13665	13722	31707	31707					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3189575076103	2	545.317432	1088.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.28	1	73.604	73.104	74.104	0.32494								0	0	0	1.0178	1	30657	30657		0.79363	0	1				27636	5688	13665	13722	31708	31708					0.07954478414171717
QWTSRKRK	8	Unmodified	_QWTSRKRK_					0	0	0		ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	ENST00000275820.3_1_7:156745216-156745255:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3177368044853	2	545.317432	1088.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.405	1	73.73	73.23	74.23	0.32494								0	0	0	1.0178	1	30712	30712		0.79363	0	1				27637	5688	13665	13722	31709	31709					0.07954478414171717
QWVRKYFREEQ	11	Unmodified	_QWVRKYFREEQ_					0	0	0		ENSG00000189057|ENST00000343597|FAM111B;nc|ENSG00000189057|Q6SJ93-2|FAM111B	ENSG00000189057|ENST00000343597|FAM111B	ENSG00000189057|ENST00000343597|FAM111B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1569.570849597454	1	1568.79684	1567.78956	2.6124	0.0040983	-0.6534	-0.0010251	1.959	0.0030733	1569.798957157583	35.78	0.064194	36.082	36.038	36.103	0.30197					5	4	2	0	0	0	0.97491	1	15029	15029		5.2969	0	1	11975000			27638	4893	13666	13723	31710	31710					0.028377101862133713
QWVVGIFLLF	10	Unmodified	_QWVVGIFLLF_					0	0	0			REV__tr|A0A7D6ZUV9|A0A7D6ZUV9_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01430PE=4SV=1	REV__tr|A0A7D6ZUV9|A0A7D6ZUV9_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3560058474541	2	611.35516	1220.69577	2.1106	0.0012903	0.6403	0.00039145	2.7509	0.0016818	611.3552112816064	78.111	0.78645	78.111	77.749	78.535	0					45	24	2	0	0	0	0.89803	1	32459	32459		0.45834	0.057624	1	1005400	+		27639	15727	13667	13724	31711	31711					0.09424642821886664
QWVVGIFLLF	10	Unmodified	_QWVVGIFLLF_					0	0	0			REV__tr|A0A7D6ZUV9|A0A7D6ZUV9_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01430PE=4SV=1	REV__tr|A0A7D6ZUV9|A0A7D6ZUV9_9CLOTAlpha/betahydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3578369021416	2	611.35516	1220.69577	2.6943	0.0016472	2.234	0.0013658	4.9284	0.003013	611.3562611766833	75.754	1.6055	77.521	76.716	78.321	1.7672					95	51	2	0	0	0	0.87343	1	31878	31878		4.3292	0.38484	1	3638600	+		27640	15727	13667	13724	31712	31712					0.09424642821886664
QWWFRDGDRAR	11	Unmodified	_QWWFRDGDRAR_					0	0	0			REV__ENSG00000121053|ENST00000225371|EPX	REV__ENSG00000121053|ENST00000225371|EPX	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1012756228447	4	373.935271	1491.71198	-0.39727	-0.00014856	1.6598	0.00062068	1.2626	0.00047212	373.9350307650562	64.754	0.45005	64.754	64.527	64.977	0					17	13	2	0	0	0	0.14606	1	27003	27003		0	0	1	674060	+		27641	9582	13668	13725	31713	31713					-0.0142088295931444
QWWLKLRPL	9	Unmodified	_QWWLKLRPL_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;PITRM1-PFKP|2|fusion;PITRM1-PFKP|1|fusion	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.3703491091728	2	620.371675	1238.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.175	1	81.175	80.675	81.675	0								0	0	0	0.42693	1	33802	33802		0.6015	0	1				27642	816	13669	13726	31714	31714					0.11898269664584404
QWWWQWSWRRG	11	Unmodified	_QWWWQWSWRRG_					0	0	0			REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.4031249880791	2	831.397276	1660.78	1.9814	0.0016473	3.1576	0.0026253	5.139	0.0042726	831.4004015684078	51.67	2.0526	51.67	51.199	53.251	0					153	66	3	0	0	0	1.0395	6	21432	21432;21533;21586;21790;21942;21990		0.30703	0.30703	1	2013500	+		27643	12403	13670	13727	31715;31716;31717;31718;31719;31720	31715					-0.02396013308680267
QWWWQWSWRRG	11	Unmodified	_QWWWQWSWRRG_					0	0	0			REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.4005615115166	2	831.397276	1660.78	1.9413	0.001614	3.6848	0.0030635	5.6261	0.0046775	831.4011980282048	53.493	1.0696	53.493	53.276	54.346	0					52	34	2	0	0	0	1.0395	3	22270	22270;22315;22366		0.30703	0.30703	1	2510900	+		27644	12403	13670	13727	31721;31722;31723	31721					-0.02396013308680267
QWWWQWSWRRG	11	Unmodified	_QWWWQWSWRRG_					0	0	0			REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	REV__ENST00000320785.9_1_17:4925760-4925838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	831.4011108279228	2	831.397276	1660.78	1.9243	0.0015998	1.0824	0.00089989	3.0066	0.0024997	831.3986370723088	64.432	1.2714	64.432	63.832	65.104	0					59	39	2	0	0	0	1.0395	1	26852	26852		0.30703	0.30703	1	366020	+		27645	12403	13670	13727	31724	31724					-0.02396013308680267
QYAGKYVLF	9	Unmodified	_QYAGKYVLF_					0	0	0		ENST00000519214.5_1_5:150400805-150405029:+|nuORF;ENSG00000211445|ENST00000388825|GPX3	ENST00000519214.5_1_5:150400805-150405029:+|nuORF	ENST00000519214.5_1_5:150400805-150405029:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7936279177666	2	544.792392	1087.57023	2.2729	0.0012383	1.0809	0.00058888	3.3538	0.0018271	544.7925886639472	47.439	0.5133	48.822	48.504	49.017	1.3825					52	15	4	0	0	0	0.059546	2	19871	19871;19915		64.236	23.788	1	6741200			27646	5201	13671	13728	31725;31726	31725					0.029949309656331025
QYAGKYVLF	9	Unmodified	_QYAGKYVLF_					0	0	0		ENST00000519214.5_1_5:150400805-150405029:+|nuORF;ENSG00000211445|ENST00000388825|GPX3	ENST00000519214.5_1_5:150400805-150405029:+|nuORF	ENST00000519214.5_1_5:150400805-150405029:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7935058474541	2	544.792392	1087.57023	2.2108	0.0012044	0.3195	0.00017406	2.5303	0.0013785	544.7922413074514	46.969	0.47155	48.945	48.653	49.125	1.976					45	14	4	0	0	0	0.059546	2	19690	19652;19690		64.236	17.315	1	7810300			27647	5201	13671	13728	31727;31728	31728					0.029949309656331025
QYAPLLAVF	9	Unmodified	_QYAPLLAVF_					0	0	0		ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2923156619072	2	511.289485	1020.56442	5.8599	0.0029961	0.11761	6.0133E-05	5.9775	0.0030562	511.28935925915977	88.329	0.54515	89.385	89.049	89.594	1.0562					41	16	3	0	0	0	0.09539	1	37235	37235		50.855	14.811	1	6951800			27648	2718	13672	13729	31729	31729					0.0549583245398253
QYAPLLAVF	9	Unmodified	_QYAPLLAVF_					0	0	0		ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	ENSG00000136261|ENST00000258761|BZW2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2914916872978	2	511.289485	1020.56442	5.0376	0.0025757	0.56485	0.0002888	5.6024	0.0028645	511.289609769108	87.857	0.44733	89.303	89.061	89.509	1.4467					36	13	3	0	0	0	0.03795	3	37064	36978;37024;37064		77.984	30.236	1	4468000			27649	2718	13672	13729	31730;31731;31732	31732					0.0549583245398253
QYASAFHFL	9	Unmodified	_QYASAFHFL_					0	0	0		ENST00000562219.1_1_15:73023651-73027536:+|nuORF;nc|ENSG00000140463|Q96RK4-3|BBS4;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2668334841728	2	542.266542	1082.51853	0.65716	0.00035636	-0.9394	-0.0005094	-0.28223	-0.00015305	542.2665180842163	57.351	0.34962	58.766	58.58	58.929	1.4145					23	12	2	0	0	0	0.0082953	3	24053	24013;24053;24101		109.63	44.394	1	5590500			27650	2919	13673	13730	31733;31734;31735	31734					-0.019428127282481
QYASAFHFL	9	Unmodified	_QYASAFHFL_					0	0	0		ENST00000562219.1_1_15:73023651-73027536:+|nuORF;nc|ENSG00000140463|Q96RK4-3|BBS4;ENSG00000140463|ENST00000268057|BBS4;nc|ENSG00000140463|Q96RK4-2|BBS4	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	ENST00000562219.1_1_15:73023651-73027536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2667724490166	2	542.266542	1082.51853	0.84336	0.00045733	-0.98348	-0.00053331	-0.14012	-7.5982E-05	542.2661246125109	56.763	0.41655	58.732	58.516	58.933	1.9684					29	13	3	0	0	0	0.022807	2	23833	23782;23833		97.075	32.838	1	5665200			27651	2919	13673	13730	31736;31737	31737					-0.019428127282481
QYDPDWFYYLR	11	Unmodified	_QYDPDWFYYLR_					0	0	0			REV__ENSG00000239713|ENST00000407997|APOBEC3G	REV__ENSG00000239713|ENST00000407997|APOBEC3G	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.5772582888603	3	522.573503	1564.69868	1.9399	0.0010137	3.2673	0.0017074	5.2072	0.0027212	522.5751122996278	44.544	0.53534	44.871	44.63	45.166	0.32674					38	17	3	0	0	0	1.0365	2	18719	18666;18719		1.2148	0.76031	1	1717600	+		27652	11915	13674	13731	31738;31739	31739					-0.061081785819169454
QYDPDWFYYLR	11	Unmodified	_QYDPDWFYYLR_					0	0	0			REV__ENSG00000239713|ENST00000407997|APOBEC3G	REV__ENSG00000239713|ENST00000407997|APOBEC3G	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.5756103396416	3	522.573503	1564.69868	1.9338	0.0010105	2.6004	0.0013589	4.5342	0.0023694	522.574632481117	45.088	1.5761	45.415	45.076	46.652	0.32674					69	52	2	0	0	0	1.0365	2	18985	18792;18985		1.2148	0.76031	1	954670	+		27653	11915	13674	13731	31740;31741	31741					-0.061081785819169454
QYDPDWFYYLR	11	Unmodified	_QYDPDWFYYLR_					0	0	0			REV__ENSG00000239713|ENST00000407997|APOBEC3G	REV__ENSG00000239713|ENST00000407997|APOBEC3G	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	522.5761596560478	3	522.573503	1564.69868	1.9399	0.0010137	3.2673	0.0017074	5.2072	0.0027212	522.5751122996278	44.544	0.53534	44.871	44.63	45.166	0.32674					38	17	3	0	0	0	0.14606	1	18792	18792		0.40827	0.31342	1	1717600	+		27654	11915	13674	13731	31742	31742					-0.061081785819169454
QYEEQFVTL	9	Unmodified	_QYEEQFVTL_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61720980-61752425:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.7822753787041	2	578.779679	1155.5448	1.0487	0.00060697	3.3834	0.0019582	4.4321	0.0025652	578.7805852130166	56.32	0.15347	58.289	58.241	58.394	1.9684					7	4	2	0	0	0	0.01454	1	23623	23623		103.75	63.791	1	8755700			27655	1035	13675	13732	31743	31743					-0.02674588347417739
QYEIWRELF	9	Unmodified	_QYEIWRELF_					0	0	0		nc|ENSG00000168092|P68402-2|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-4|PAFAH1B2;ENSG00000168092|ENST00000527958|PAFAH1B2;nc|ENSG00000168092|P68402-3|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3262206912041	2	642.324588	1282.63462	2.082	0.0013373	0.41017	0.00026346	2.4922	0.0016008	642.3246476844386	76.091	0.6023	77.385	77.16	77.762	1.2938					53	19	4	0	0	0	2.9716E-05	3	31935	31935;31984;32043		163.04	97.801	1	6708700			27656	4016	13676	13733	31744;31745;31746	31744					0.0046108605179142614
QYEIWRELF	9	Unmodified	_QYEIWRELF_					0	0	0		nc|ENSG00000168092|P68402-2|PAFAH1B2;ENST00000533206.1_1_11:117023163-117034692:+|nuORF;nc|ENSG00000168092|P68402-4|PAFAH1B2;ENSG00000168092|ENST00000527958|PAFAH1B2;nc|ENSG00000168092|P68402-3|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	nc|ENSG00000168092|P68402-2|PAFAH1B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3252441287041	2	642.324588	1282.63462	2.5245	0.0016216	-0.49692	-0.00031918	2.0276	0.0013024	642.3240028678065	75.547	0.66214	77.328	77.103	77.765	1.7817					57	21	4	0	0	0	5.27E-05	2	31710	31659;31710		149.91	84.679	1	8453700			27657	4016	13676	13733	31747;31748	31748					0.0046108605179142614
QYESKVFYL	9	Unmodified	_QYESKVFYL_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000170027|ENST00000307630|YWHAG	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.8002807497978	2	588.800414	1175.58628	1.7701	0.0010423	-3.1137	-0.0018334	-1.3436	-0.0007911	588.7986526152929	46.396	0.75054	47.771	47.493	48.243	1.3751					63	23	4	0	0	0	0.20671	1	19382	19382		32.305	5.4218	1	7191500			27658	2359	13677	13734	31749	31749					0.005505924119233896
QYESKVFYL	9	Unmodified	_QYESKVFYL_					0	0	0		ENSG00000128245|ENST00000248975|YWHAH;ENST00000397492.1_1_22:32346295-32352776:+|nuORF;ENSG00000170027|ENST00000307630|YWHAG	ENSG00000128245|ENST00000248975|YWHAH	ENSG00000128245|ENST00000248975|YWHAH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8010131716728	2	588.800414	1175.58628	1.2979	0.00076422	-2.2978	-0.001353	-0.9999	-0.00058874	588.8001400258116	45.927	0.74739	47.897	47.599	48.347	1.9703					61	23	4	0	0	0	0.0022704	2	19231	19180;19231		129.77	57.85	1	5852800			27659	2359	13677	13734	31750;31751	31751					0.005505924119233896
QYFDSRGMFI	10	Unmodified	_QYFDSRGMFI_					0	0	0		ENST00000497508.1_1_2:669582-669891:-|nuORF;nc|ENSG00000151353|Q96B42-2|TMEM18;ENST00000477202.1_1_2:669582-675654:-|nuORF;ENSG00000151353|ENST00000281017|TMEM18	ENST00000497508.1_1_2:669582-669891:-|nuORF	ENST00000497508.1_1_2:669582-669891:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.2957031130791	2	632.294973	1262.57539	0.13779	8.7124E-05	0.10274	6.4963E-05	0.24053	0.00015209	632.2949933367892	57.479	0.33451	58.894	58.696	59.03	1.4145					39	16	4	0	0	0	0.049285	3	24046	24046;24086;24130		110.55	62.207	1	15575000			27660	3285	13678	13735	31752;31753;31754	31752					-0.04539133234015935
QYFDSRGMFI	10	Unmodified	_QYFDSRGMFI_					0	0	0		ENST00000497508.1_1_2:669582-669891:-|nuORF;nc|ENSG00000151353|Q96B42-2|TMEM18;ENST00000477202.1_1_2:669582-675654:-|nuORF;ENSG00000151353|ENST00000281017|TMEM18	ENST00000497508.1_1_2:669582-669891:-|nuORF	ENST00000497508.1_1_2:669582-669891:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.2939941287041	2	632.294973	1262.57539	0.25655	0.00016222	0.18954	0.00011984	0.44609	0.00028206	632.2951608361785	56.892	0.38824	58.86	58.662	59.05	1.9684					34	13	4	0	0	0	0.049285	3	23831	23831;23879;23920		133.05	72.978	1	18027000			27661	3285	13678	13735	31755;31756;31757	31755					-0.04539133234015935
QYFPKAPEF	9	Unmodified	_QYFPKAPEF_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-5|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7833740115166	2	563.782025	1125.5495	2.6531	0.0014958	-2.3257	-0.0013112	0.32732	0.00018454	563.7809118210429	44.639	0.37621	46.004	45.804	46.18	1.3653					17	11	2	0	0	0	0.32838	2	18697	18697;18746		24.021	12.38	1	890720			27662	1142	13679	13736	31758;31759	31758					-0.008256594140220841
QYFPKAPEF	9	Unmodified	_QYFPKAPEF_					0	0	0		nc|ENSG00000090686|Q86UV5-3|USP48;nc|ENSG00000090686|Q86UV5-2|USP48;ENSG00000090686|ENST00000308271|USP48;nc|ENSG00000090686|Q86UV5-8|USP48;nc|ENSG00000090686|Q86UV5-5|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	nc|ENSG00000090686|Q86UV5-3|USP48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7833129763603	2	563.782025	1125.5495	2.2571	0.0012725	-1.7761	-0.0010013	0.481	0.00027118	563.7806692517023	44.062	0.37943	46.005	45.767	46.146	1.9438					17	11	2	0	0	0	0.44512	1	18444	18444		18.146	6.5061	1	757540			27663	1142	13679	13736	31760	31760					-0.008256594140220841
QYFSTLYKTQV	11	Unmodified	_QYFSTLYKTQV_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	689.3556396365166	2	689.356085	1376.69762	2.0743	0.0014299	-2.8356	-0.0019547	-0.76129	-0.0005248	689.3539136678346	64.992	0.2548	64.992	64.849	65.104	0					13	7	3	0	0	0	0.42228	1	27099	27099		26.268	2.4784	1	773340			27664	827;2609	13680	13737	31761	31761					0.024336070491926876
QYFSTLYKTQV	11	Unmodified	_QYFSTLYKTQV_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	689.3538085818291	2	689.356085	1376.69762	1.965	0.0013546	-3.0006	-0.0020685	-1.0356	-0.00071388	689.3541249423361	63.537	0.33236	64.95	64.753	65.085	1.4134					22	10	3	0	0	0	0.50855	1	26647	26647		23.79	1.1317	1	3168500			27665	827;2609	13680	13737	31762	31762					0.024336070491926876
QYFSTLYKTQV	11	Unmodified	_QYFSTLYKTQV_					0	0	0		ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000067900|ENST00000399799|ROCK1;ENSG00000134318|ENST00000315872|ROCK2	ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	689.3561279177666	2	689.356085	1376.69762	1.6148	0.0011132	-2.608	-0.0017979	-0.99321	-0.00068467	689.3547526749874	63.049	0.33835	64.993	64.814	65.152	1.9444					25	10	3	0	0	0	0.50855	1	26488	26488		23.79	1.1317	1	2517600			27666	827;2609	13680	13737	31763	31763					0.024336070491926876
QYGDDDYMYF	10	Unmodified	_QYGDDDYMYF_					0	0	0			REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	MSMS	GG20161007_CRH_Patient100_A02_01	1	658.7436401247978	2	658.742436	1315.47032	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.886	1	99.886	99.386	100.39	0								0	0	0	0.66237	1	41815	41815		0.45834	0	1		+		27667	8873	13681	13738	31764	31764					-0.17479719221137202
QYIASIKSK	9	Unmodified	_QYIASIKSK_					0	0	0			REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.3041259646416	2	519.303124	1036.5917	2.0785	0.0010794	0.39936	0.00020739	2.4779	0.0012868	519.3033903526361	76.026	0.40691	76.026	75.82	76.226	0					33	12	4	0	0	0	0.32838	1	31623	31623		24.021	0	1	11543000	+		27668	14266	13682	13739	31765	31765					0.07486315994378856
QYIASIKSK	9	Unmodified	_QYIASIKSK_					0	0	0			REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3042480349541	2	519.303124	1036.5917	3.4393	0.001786	-0.88462	-0.00045938	2.5547	0.0013267	519.3027534667699	74.527	0.4206	75.845	75.681	76.101	1.318					41	13	4	0	0	0	0.32838	2	31292	31292;31333		24.021	0	1	28846000	+		27669	14266	13682	13739	31766;31767	31766					0.07486315994378856
QYIASIKSK	9	Unmodified	_QYIASIKSK_					0	0	0			REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|180|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3041869997978	2	519.303124	1036.5917	3.0718	0.0015952	-0.76851	-0.00039909	2.3032	0.0011961	519.3028259057365	74.026	0.52002	75.823	75.657	76.177	1.7962					45	16	4	0	0	0	0.22154	2	31035	31035;31082		30.637	0	1	16318000	+		27670	14266	13682	13739	31768;31769	31768					0.07486315994378856
QYIDVSHVF	9	Unmodified	_QYIDVSHVF_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2;ENST00000588021.5_1_19:6007990-6026242:-|nuORF	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2761718630791	2	554.277106	1106.53966	0.74431	0.00041255	-0.081908	-4.54E-05	0.6624	0.00036715	554.2764241667753	53.37	0.45265	54.77	54.442	54.894	1.4005					31	18	2	0	0	0	0.0075027	2	22344	22306;22344		112.59	70.638	1	7064700			27671	1093	13683	13740	31770;31771	31771					-0.009348474193984657
QYIDVSHVF	9	Unmodified	_QYIDVSHVF_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2;ENST00000588021.5_1_19:6007990-6026242:-|nuORF	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2773925662041	2	554.277106	1106.53966	0.88981	0.0004932	0.010207	5.6573E-06	0.90002	0.00049886	554.2766346524929	52.807	0.42226	54.776	54.477	54.899	1.9697					38	17	3	0	0	0	0.0092758	2	22147	22105;22147		108	71.87	1	5744100			27672	1093	13683	13740	31772;31773	31773					-0.009348474193984657
QYIKKIYKK	9	Unmodified	_QYIKKIYKK_					0	0	0			REV__tr|A0A7D7AEQ1|A0A7D7AEQ1_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03290PE=4SV=1	REV__tr|A0A7D7AEQ1|A0A7D7AEQ1_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.5898620486259	3	404.588536	1210.74378	0.37139	0.00015026	0.48415	0.00019588	0.85554	0.00034614	404.5885154853439	21.759	0.56204	23.375	23.079	23.641	1.6158					39	18	3	0	0	0	0.85206	1	9143	9143		0.26902	0	1	1261600	+		27673	15914	13684	13741	31774	31774					0.14683716741910757
QYILFPLRF	9	Unmodified	_QYILFPLRF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8462402224541	2	598.844959	1195.67537	1.6431	0.00098394	0.12718	7.6158E-05	1.7702	0.0010601	598.8449710643565	84.208	0.44075	85.386	85.137	85.578	1.1783					33	14	3	0	0	0	0.002761	3	35346	35297;35346;35392		128.37	76.097	1	7251100			27674	1345	13685	13742	31775;31776;31777	31776					0.08535472162066071
QYILFPLRF	9	Unmodified	_QYILFPLRF_					0	0	0		ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	ENSG00000101407|ENST00000373447|TTI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.8459350466728	2	598.844959	1195.67537	1.7513	0.0010487	0.26975	0.00016154	2.021	0.0012103	598.8448682886241	83.661	0.39623	85.299	85.105	85.501	1.6379					29	12	3	0	0	0	0.002761	3	35106	35063;35106;35151		128.37	76.097	1	7428900			27675	1345	13685	13742	31778;31779;31780	31779					0.08535472162066071
QYLDGTWSL	9	Unmodified	_QYLDGTWSL_					0	0	0		KIF26B-SMYD3|3|fusion;ENSG00000162849|ENST00000407071|KIF26B;ENST00000479506.1_1_1:245517197-245533964:+|nuORF;KIF26B-SMYD3|5|fusion	KIF26B-SMYD3|3|fusion	KIF26B-SMYD3|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1082.516284167767	1	1082.5153	1081.50803	2.0701	0.0022409	-1.738	-0.0018814	0.33206	0.00035946	1082.5117225149963	65.159	0.21869	67.068	66.969	67.187	1.9085					12	6	2	0	0	0	0.057024	1	27346	27346		65.235	17.486	1	1278700			27676	7667	13686	13743	31781	31781					-0.029468401733083738
QYLLDTSTW	9	Unmodified	_QYLLDTSTW_					0	0	0		ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7759887576103	2	563.774396	1125.53424	3.108	0.0017522	0.039222	2.2112E-05	3.1472	0.0017743	563.7742783913557	65.061	0.46982	66.46	66.224	66.694	1.3989					38	14	4	0	0	0	0.059546	2	27267	27267;27318		64.236	41.088	1	8607000			27677	4119	13687	13744	31782;31783	31782					-0.02350571001852586
QYLLDTSTW	9	Unmodified	_QYLLDTSTW_					0	0	0		ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1126.539721667767	1	1126.54152	1125.53424	2.6841	0.0030238	-0.3893	-0.00043856	2.2948	0.0025852	1126.5412935865322	65.061	0.28537	66.46	66.316	66.601	1.3989					18	8	3	0	0	0	0.10294	1	27323	27323		48.346	21.462	1	1877600			27678	4119	13687	13744	31784	31784					-0.02350571001852586
QYLLDTSTW	9	Unmodified	_QYLLDTSTW_					0	0	0		ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7756835818291	2	563.774396	1125.53424	2.0066	0.0011313	0.25172	0.00014191	2.2583	0.0012732	563.7746848292695	64.674	0.44505	66.602	66.325	66.77	1.928					34	13	3	0	0	0	0.037761	2	27122	27073;27122		78.149	47.925	1	5646800			27679	4119	13687	13744	31785;31786	31786					-0.02350571001852586
QYLLDTSTW	9	Unmodified	_QYLLDTSTW_					0	0	0		ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	ENSG00000169908|ENST00000305366|TM4SF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1126.541918933392	1	1126.54152	1125.53424	1.9265	0.0021703	-0.65974	-0.00074323	1.2667	0.001427	1126.5422695807367	64.615	0.35286	66.543	66.356	66.709	1.928					20	10	3	0	0	0	0.042029	1	27114	27114		74.423	40.32	1	933740			27680	4119	13687	13744	31787	31787					-0.02350571001852586
QYLMASDMAGK	11	Unmodified	_QYLMASDMAGK_					0	0	0		nc|ENSG00000119599|Q8WV16-4|DCAF4;nc|ENSG00000119599|Q8WV16-2|DCAF4;nc|ENSG00000119599|Q8WV16-3|DCAF4;nc|ENSG00000119599|Q8WV16-5|DCAF4;ENSG00000119599|ENST00000358377|DCAF4	nc|ENSG00000119599|Q8WV16-4|DCAF4	nc|ENSG00000119599|Q8WV16-4|DCAF4	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5239135622978	3	405.522986	1213.54713	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.641	1	26.9	26.4	27.4	1.2594								0	0	0	0.63775	1	10738	10738		1.3296	0.1363	1				27681	2075	13688	13745	31788	31788					-0.051101992056374
QYLNLRRSK	9	Unmodified	_QYLNLRRSK_					0	0	0		nc|ENSG00000010626|Q53EV4-2|LRRC23	nc|ENSG00000010626|Q53EV4-2|LRRC23	nc|ENSG00000010626|Q53EV4-2|LRRC23	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3434326052666	2	589.343646	1176.67274	2.284	0.001346	-1.2429	-0.00073247	1.0411	0.00061357	589.3428430300036	75.817	0.77608	76.138	75.646	76.422	0.32163					44	24	2	0	0	0	0.61249	1	31625	31625		10.824	0	1	880400			27682	7813	13689	13746	31789	31789					0.09147016757128767
QYLPHVARL	9	Unmodified	_QYLPHVARL_					0	0	0		ENST00000467910.5_1_9:136231851-136242840:-|nuORF;nc|ENSG00000148248|O15260-3|SURF4;nc|ENSG00000148248|O15260-2|SURF4;ENSG00000148248|ENST00000371989|SURF4	ENST00000467910.5_1_9:136231851-136242840:-|nuORF	ENST00000467910.5_1_9:136231851-136242840:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.2139770388603	3	366.213581	1095.61891	-0.22067	-8.0813E-05	1.7823	0.0006527	1.5616	0.00057188	366.21416184950306	29.89	0.4916	31.173	30.949	31.441	1.2825					41	15	4	0	0	0	0.54255	2	12539	12489;12539		13.615	6.2742	1	7426900			27683	3200	13690	13747	31790;31791	31791					0.07492844325406622
QYLPHVARL	9	Unmodified	_QYLPHVARL_					0	0	0		ENST00000467910.5_1_9:136231851-136242840:-|nuORF;nc|ENSG00000148248|O15260-3|SURF4;nc|ENSG00000148248|O15260-2|SURF4;ENSG00000148248|ENST00000371989|SURF4	ENST00000467910.5_1_9:136231851-136242840:-|nuORF	ENST00000467910.5_1_9:136231851-136242840:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.2132446169853	3	366.213581	1095.61891	0.43856	0.00016061	-0.098302	-3.5999E-05	0.34026	0.00012461	366.21337170719465	29.391	0.48837	31.19	30.898	31.386	1.7987					36	15	3	0	0	0	0.54255	1	12324	12324		13.615	4.2317	1	5977800			27684	3200	13690	13747	31792	31792					0.07492844325406622
QYLTRGEES	9	Unmodified	_QYLTRGEES_					0	0	0		nc|ENSG00000186470|P78410-3|BTN3A2;nc|ENSG00000186470|P78410-2|BTN3A2;ENSG00000186470|ENST00000377708|BTN3A2	nc|ENSG00000186470|P78410-3|BTN3A2	nc|ENSG00000186470|P78410-3|BTN3A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1082.511645495892	1	1082.51128	1081.504	2.5518	0.0027624	-3.488	-0.0037758	-0.93618	-0.0010134	1082.509153613766	65.545	0.24689	66.944	66.817	67.064	1.3989					10	7	2	0	0	0	0.13873	1	27502	27502		39.957	7.6518	1	947460			27685	4792	13691	13748	31793	31793					-0.033489296670495605
QYMERLQLL	9	Unmodified	_QYMERLQLL_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1;ENST00000495492.1_1_1:155182265-155182385:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3206664919853	2	597.320991	1192.62743	0.90217	0.00053889	-0.81395	-0.00048619	0.088221	5.2696E-05	597.3208073623946	52.715	0.47733	54.112	53.992	54.469	1.3966					34	14	3	0	0	0	1.5898E-05	2	22058	22058;22108		176.84	80.726	1	9185300			27686	4270	13692	13749	31794;31795	31794					0.03882030179738649
QYMERLQLL	9	Unmodified	_QYMERLQLL_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1;ENST00000495492.1_1_1:155182265-155182385:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3208495974541	2	597.320991	1192.62743	1.4466	0.0008641	-2.8481	-0.0017012	-1.4014	-0.0008371	597.3202273798487	52.141	0.46356	54.113	53.985	54.448	1.9722					30	14	3	0	0	0	3.8363E-05	2	21880	21834;21880		157.8	65.142	1	7406300			27687	4270	13692	13749	31796;31797	31797					0.03882030179738649
QYMKIISSF	9	Unmodified	_QYMKIISSF_					0	0	0		ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	ENSG00000170606|ENST00000304858|HSPA4	ENSG00000170606|ENST00000304858|HSPA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.7915527224541	2	558.791535	1115.56852	0.27517	0.00015376	0.72873	0.00040721	1.0039	0.00056097	558.7920820580968	50.701	0.30478	52.677	52.546	52.851	1.9753					20	9	3	0	0	0	0.098163	1	21244	21244		49.933	19.296	1	2325600			27688	4155	13693	13750	31798	31798					0.015355538854009865
QYMKIISSF	9	Unmodified	_QYMKIISSF_					0	0	0		ENSG00000170606|ENST00000304858|HSPA4;ENST00000514825.1_1_5:132437411-132440125:+|nuORF	ENSG00000170606|ENST00000304858|HSPA4	ENSG00000170606|ENST00000304858|HSPA4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	558.791535	1115.56852	0.73027	0.00040807	-0.14124	-7.8925E-05	0.58903	0.00032914	558.7911504585408	51.337	0.27851	52.731	52.558	52.836	1.3938	0.027265	-0.00047116	NaN	49.933	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1795800			27689	4155	13693	13750							0.015355538854009865
QYNPHVHQL	9	Unmodified	_QYNPHVHQL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.1926757693291	3	379.192957	1134.55704	-0.7651	-0.00029012	0.28588	0.0001084	-0.47922	-0.00018172	379.1929047001342	14.276	0.27718	15.045	14.932	15.209	0.76937					31	12	4	0	0	0	0.053939	1	5932	5932		66.457	49.014	1	3272900			27690	3279	13694	13751	31799	31799					-0.004855070937082928
QYNPHVHQL	9	Unmodified	_QYNPHVHQL_					0	0	0		nc|ENSG00000151208|Q8TDM6-5|DLG5;ENST00000475613.6_1_10:79552200-79579275:-|nuORF;ENST00000463362.5_1_10:79552200-79579794:-|nuORF;nc|ENSG00000151208|Q8TDM6-2|DLG5;nc|ENSG00000151208|Q8TDM6-4|DLG5;ENSG00000151208|ENST00000372391|DLG5;ENST00000459739.5_1_10:79567604-79581271:-|nuORF	nc|ENSG00000151208|Q8TDM6-5|DLG5	nc|ENSG00000151208|Q8TDM6-5|DLG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.1925842165947	3	379.192957	1134.55704	-0.091317	-3.4627E-05	-0.56803	-0.00021539	-0.65935	-0.00025002	379.1925489877036	14.194	0.58392	15.091	14.648	15.232	0.89664					50	26	4	0	0	0	0.11669	1	5889	5889		43.772	24.41	1	3301700			27691	3279	13694	13751	31800	31800					-0.004855070937082928
QYNTYPIKL	9	Unmodified	_QYNTYPIKL_					0	0	0		ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3101684451103	2	570.308406	1138.60226	1.6487	0.00094026	1.0963	0.00062521	2.7449	0.0015655	570.3095709763779	42.937	0.37812	44.277	44.077	44.455	1.3399					30	11	3	0	0	0	0.034867	2	18017	17964;18017		80.676	44.549	1	6836900			27692	733	13695	13752	31801;31802	31802					0.038502986487856106
QYNTYPIKL	9	Unmodified	_QYNTYPIKL_					0	0	0		ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3098632693291	2	570.308406	1138.60226	1.7423	0.00099362	0.072329	4.125E-05	1.8146	0.0010349	570.3086221765632	42.352	0.40489	44.273	44.041	44.446	1.9211					31	12	3	0	0	0	0.023685	2	17770	17714;17770		96.367	52.508	1	7061500			27693	733	13695	13752	31803;31804	31804					0.038502986487856106
QYNTYPIKLF	10	Unmodified	_QYNTYPIKLF_					0	0	0		ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.8438598513603	2	643.842613	1285.67067	2.5439	0.0016379	0.26305	0.00016936	2.807	0.0018072	643.8428709873258	61.641	0.37413	63.058	62.896	63.27	1.4177					25	11	3	0	0	0	0.048317	2	25904	25852;25904		85.642	64.105	1	1879900			27694	733	13696	13753	31805;31806	31806					0.03926543228635637
QYNTYPIKLF	10	Unmodified	_QYNTYPIKLF_					0	0	0		ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.8448974490166	2	643.842613	1285.67067	2.2537	0.0014511	0.34442	0.00022175	2.5982	0.0016728	643.8430576669534	61.164	0.30729	63.129	62.942	63.25	1.9653					23	9	3	0	0	0	0.12205	1	25655	25655		60.074	43.925	1	1572800			27695	733	13696	13753	31807	31807					0.03926543228635637
QYPVIIHLI	9	Unmodified	_QYPVIIHLI_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3326293826103	2	548.331685	1094.64882	1.8519	0.0010154	-0.17365	-9.5218E-05	1.6782	0.00092022	548.3314037416596	69.378	1.2807	70.743	69.847	71.128	1.3657					101	41	3	0	0	0	0.11911	5	28959	28959;29009;29059;29124;29175		42.968	22.097	1	8019700			27696	804	13697	13754	31808;31809;31810;31811;31812	31808					0.10527783270754298
QYPVIIHLI	9	Unmodified	_QYPVIIHLI_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3321411013603	2	548.331685	1094.64882	1.5033	0.00082432	-0.12894	-7.0702E-05	1.3744	0.00075362	548.3313818067287	68.821	1.3529	70.674	69.719	71.072	1.853					109	43	3	0	0	0	0.070759	4	28826	28724;28774;28826;28875		59.795	27.678	1	5758700			27697	804	13697	13754	31813;31814;31815;31816	31815					0.10527783270754298
QYPVYWDHLEF	11	Unmodified	_QYPVYWDHLEF_					0	0	0		chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21;ENSG00000090487|ENST00000204566|SPG21	chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21	chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	748.8461181521416	2	748.845884	1495.67722	1.8639	0.0013958	0.13724	0.00010277	2.0011	0.0014985	748.8462608911035	71.079	0.41891	72.421	72.21	72.629	1.3415					21	13	2	0	0	0	0.29237	1	29842	29842		32.786	19.743	1	2360000			27698	207	13698	13755	31817	31817					-0.05079563610615878
QYPVYWDHLEF	11	Unmodified	_QYPVYWDHLEF_					0	0	0		chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21;ENSG00000090487|ENST00000204566|SPG21	chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21	chr15:64983593-64990090|416|10.67|0.66|4.01|-|ENST00000559677|SPG21,SPG21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	748.8502075076103	2	748.845884	1495.67722	0.67074	0.00050228	-0.4304	-0.00032231	0.24034	0.00017997	748.8468042251046	70.68	0.45219	72.518	72.228	72.681	1.8378					25	14	3	0	0	0	0.16695	1	29648	29648		43.772	36.163	1	1753500			27699	207	13698	13755	31818	31818					-0.05079563610615878
QYQKVPVLF	9	Unmodified	_QYQKVPVLF_					0	0	0		RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant;RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant;RNF213|p.V5030Tfs*30|1|0.14|ENSG00000173821|chr17:80389259-80389260|-/ACAC|frameshift_variant;RNF213|p.T5031Rfs*29|1|0.06|ENSG00000173821|chr17:80389261-80389262|-/TCGG|frameshift_variant;RNF213|p.G5057Vfs*8|1|0.18|ENSG00000173821|chr17:80389340-80389340|G/-|frameshift_variant;nc|ENSG00000173821|Q63HN8|RNF213;ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant	RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3240844607353	2	561.321317	1120.62808	2.0343	0.0011419	1.8075	0.0010146	3.8419	0.0021565	561.3223781388775	50.576	0.36836	51.97	51.77	52.139	1.3938					27	11	3	0	0	0	0.046276	2	21153	21153;21207		70.716	34.671	1	2342700			27700	4302	13699	13756	31819;31820	31819					0.07259192891069688
QYQKVPVLF	9	Unmodified	_QYQKVPVLF_					0	0	0		RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant;RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant;RNF213|p.V5030Tfs*30|1|0.14|ENSG00000173821|chr17:80389259-80389260|-/ACAC|frameshift_variant;RNF213|p.T5031Rfs*29|1|0.06|ENSG00000173821|chr17:80389261-80389262|-/TCGG|frameshift_variant;RNF213|p.G5057Vfs*8|1|0.18|ENSG00000173821|chr17:80389340-80389340|G/-|frameshift_variant;nc|ENSG00000173821|Q63HN8|RNF213;ENSG00000173821|ENST00000582970|RNF213;nc|ENSG00000173821|Q63HN8-4|RNF213	RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant	RNF213|p.N2986Tfs*32|1|0.9|ENSG00000173821|chr17:80347289-80347289|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3232910037041	2	561.321317	1120.62808	1.6343	0.00091735	2.9041	0.0016301	4.5384	0.0025475	561.3227255827526	49.98	0.37035	51.958	51.758	52.128	1.9772					24	11	3	0	0	0	0.033521	2	20916	20916;20967		81.864	39.769	1	2574700			27701	4302	13699	13756	31821;31822	31821					0.07259192891069688
QYSNAFDVF	9	Unmodified	_QYSNAFDVF_					0	0	0		ENSG00000141232|ENST00000499247|TOB1;TOB1|p.P300R|1|0.62|ENSG00000141232|chr17:50863119-50863119|G/C|missense_variant	ENSG00000141232|ENST00000499247|TOB1	ENSG00000141232|ENST00000499247|TOB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7477294802666	2	545.745639	1089.47673	2.9792	0.0016259	1.3888	0.00075791	4.3679	0.0023838	545.7456212249457	64.656	0.33917	66.063	65.954	66.293	1.4071					19	10	2	0	0	0	0.27148	1	27123	27123		26.884	16.06	1	1212300			27702	2949	13700	13757	31823	31823					-0.06443413207443882
QYSNAFDVF	9	Unmodified	_QYSNAFDVF_					0	0	0		ENSG00000141232|ENST00000499247|TOB1;TOB1|p.P300R|1|0.62|ENSG00000141232|chr17:50863119-50863119|G/C|missense_variant	ENSG00000141232|ENST00000499247|TOB1	ENSG00000141232|ENST00000499247|TOB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7461425662041	2	545.745639	1089.47673	2.5245	0.0013778	0.52084	0.00028424	3.0454	0.001662	545.7464015539234	64.258	0.34427	66.186	65.95	66.294	1.928					18	10	2	0	0	0	0.04145	1	26943	26943		74.929	48.045	1	1271500			27703	2949	13700	13757	31824	31824					-0.06443413207443882
QYSPLLAAF	9	Unmodified	_QYSPLLAAF_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1	ENSG00000082153|ENST00000409600|BZW1	ENSG00000082153|ENST00000409600|BZW1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2722350955009	2	505.271293	1008.52803	2.7188	0.0013738	-0.72702	-0.00036734	1.9918	0.0010064	505.27115207159636	76.064	0.53932	77.357	77.068	77.607	1.2938					29	17	2	0	0	0	0.033504	2	31947	31900;31947		81.89	27.117	1	3479200			27704	1028	13701	13758	31825;31826	31826					0.024109555572863428
QYSPLLAAF	9	Unmodified	_QYSPLLAAF_					0	0	0		ENSG00000082153|ENST00000409600|BZW1;nc|ENSG00000082153|Q7L1Q6-4|BZW1;nc|ENSG00000082153|Q7L1Q6-3|BZW1	ENSG00000082153|ENST00000409600|BZW1	ENSG00000082153|ENST00000409600|BZW1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2723876833916	2	505.271293	1008.52803	2.6681	0.0013481	-0.59203	-0.00029913	2.0761	0.001049	505.27104841151885	75.551	0.42122	77.332	77.072	77.493	1.7817					28	13	3	0	0	0	0.037761	1	31662	31662		78.149	3.7266	1	2983500			27705	1028	13701	13758	31827	31827					0.024109555572863428
QYTDLLRLF	9	Unmodified	_QYTDLLRLF_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion	ENSG00000213639|ENST00000395366|PPP1CB	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8234130740166	2	584.821681	1167.62881	2.6055	0.0015237	0.42305	0.00024741	3.0285	0.0017711	584.8219407963114	80.151	0.40416	81.402	81.14	81.544	1.2512					23	12	2	0	0	0	0.015029	2	33658	33610;33658		103.35	67.309	1	5494800			27706	5225	13702	13759	31828;31829	31829					0.05169987540125476
QYTDLLRLF	9	Unmodified	_QYTDLLRLF_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;PLB1-PPP1CB|1|fusion	ENSG00000213639|ENST00000395366|PPP1CB	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8230468630791	2	584.821681	1167.62881	1.4723	0.00086102	0.48828	0.00028556	1.9606	0.0011466	584.8219484588245	79.621	0.36886	81.338	81.137	81.506	1.7167					22	11	2	0	0	0	0.026734	2	33377	33377;33430		92.653	64.166	1	3892600			27707	5225	13702	13759	31830;31831	31830					0.05169987540125476
QYVSAFSKL	9	Unmodified	_QYVSAFSKL_					0	0	0		nc|ENSG00000165283|Q9UJZ1-2|STOML2;ENSG00000165283|ENST00000356493|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7833740115166	2	521.782025	1041.5495	2.4453	0.0012759	-0.92679	-0.00048358	1.5185	0.00079231	521.7812429084478	39.633	0.25352	40.943	40.802	41.055	1.3102					12	8	2	0	0	0	0.63129	1	16647	16647		10.074	1.4806	1	687900			27708	3828	13703	13760	31832	31832					0.030383405859993218
QYVSAFSKL	9	Unmodified	_QYVSAFSKL_					0	0	0		nc|ENSG00000165283|Q9UJZ1-2|STOML2;ENSG00000165283|ENST00000356493|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	nc|ENSG00000165283|Q9UJZ1-2|STOML2	MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7833129763603	2	521.782025	1041.5495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.116	1	40.953	40.453	41.453	1.8366								0	0	0	0.40033	1	16399	16399		8.7454	0.15213	1				27709	3828	13703	13760	31833	31833					0.030383405859993218
QYVVDLTSF	9	Unmodified	_QYVVDLTSF_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2727538943291	2	536.27149	1070.52843	2.0928	0.0011223	1.1631	0.00062373	3.2559	0.001746	536.271622776068	69.064	0.37099	70.429	70.187	70.558	1.3657					26	11	3	0	0	0	0.12174	1	28945	28945		42.095	18.946	1	5727900			27710	2686	13704	13761	31834	31834					-0.004016695135305781
QYVVDLTSF	9	Unmodified	_QYVVDLTSF_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1071.537768542767	1	1071.5357	1070.52843	2.3021	0.0024668	0.39412	0.00042232	2.6962	0.0028891	1071.5355216241135	69.121	0.36536	70.486	70.22	70.585	1.3657					23	11	3	0	0	0	0.01454	2	28958	28958;29008		103.75	43.674	1	3334800			27711	2686	13704	13761	31835;31836	31835					-0.004016695135305781
QYVVDLTSF	9	Unmodified	_QYVVDLTSF_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1071.533740222454	1	1071.5357	1070.52843	2.1701	0.0023254	-0.57202	-0.00061295	1.5981	0.0017124	1071.5348496559022	68.512	0.34044	70.365	70.217	70.558	1.853					24	10	3	0	0	0	0.033504	2	28726	28726;28773		81.89	27.275	1	3202700			27712	2686	13704	13761	31837;31838	31837					-0.004016695135305781
QYVVDLTSF	9	Unmodified	_QYVVDLTSF_					0	0	0		ENST00000487953.1_1_1:233091430-233112053:+|nuORF;ENST00000494689.5_1_1:233086425-233113974:+|nuORF;ENSG00000135778|ENST00000366628|NTPCR	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	ENST00000487953.1_1_1:233091430-233112053:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	536.27149	1070.52843	1.9545	0.0010482	-0.031929	-1.7122E-05	1.9226	0.001031	536.2711913496472	68.601	0.50138	70.454	70.056	70.558	1.853	0.012228	-0.0006972	NaN	42.095	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4780300			27713	2686	13704	13761							-0.004016695135305781
QYVYWLHML	9	Unmodified	_QYVYWLHML_					0	0	0		ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8134033083916	2	626.812802	1251.61105	2.2717	0.0014239	-0.40161	-0.00025174	1.8701	0.0011722	626.8126060481434	76.448	0.37733	77.742	77.575	77.952	1.2938					27	11	3	0	0	0	0.045797	1	32094	32094		70.865	40.228	1	2155200			27714	2694	13705	13762	31839	31839					-0.004690509863849002
QYVYWLHML	9	Unmodified	_QYVYWLHML_					0	0	0		ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	ENSG00000135926|ENST00000258412|TMBIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8137084841728	2	626.812802	1251.61105	2.2149	0.0013883	-1.3318	-0.00083476	0.88314	0.00055356	626.8128207815465	75.906	0.30373	77.673	77.478	77.782	1.7672					22	9	3	0	0	0	0.11643	1	31840	31840		49.669	25.648	1	2036400			27715	2694	13705	13762	31840	31840					-0.004690509863849002
QYWEAQGWTF	10	Unmodified	_QYWEAQGWTF_					0	0	0		ENST00000523948.5_1_8:56686169-56737149:+|nuORF;ENSG00000137574|ENST00000260129|TGS1	ENST00000523948.5_1_8:56686169-56737149:+|nuORF	ENST00000523948.5_1_8:56686169-56737149:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	658.2924072146416	2	658.290745	1314.56694	2.9165	0.0019199	-0.47119	-0.00031018	2.4453	0.0016097	658.2893733653985	74.145	0.27272	75.941	75.778	76.051	1.7962					15	8	3	0	0	0	0.048317	1	31104	31104		85.642	70.393	1	2102300			27716	2777	13706	13763	31841	31841					-0.0777636387902021
QYWEAQGWTF	10	Unmodified	_QYWEAQGWTF_					0	0	0		ENST00000523948.5_1_8:56686169-56737149:+|nuORF;ENSG00000137574|ENST00000260129|TGS1	ENST00000523948.5_1_8:56686169-56737149:+|nuORF	ENST00000523948.5_1_8:56686169-56737149:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	658.290745	1314.56694	3.0838	0.00203	-2.0367	-0.0013407	1.0471	0.00068927	658.2883945155775	74.576	0.29978	75.882	75.728	76.028	1.3063	-0.02966	-0.0011533	NaN	85.642	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1203300			27717	2777	13706	13763							-0.0777636387902021
RAAKKLWK	8	Unmodified	_RAAKKLWK_					0	0	0		nc|ENSG00000159023|P11171-6|EPB41;nc|ENSG00000159023|P11171-4|EPB41;nc|ENSG00000159023|P11171-3|EPB41;nc|ENSG00000159023|P11171-7|EPB41;EPB41|p.L717Tfs*15|1|0.18|ENSG00000159023|chr1:29065123-29065126|CTTA/-|frameshift_variant;nc|ENSG00000159023|P11171-5|EPB41;nc|ENSG00000159023|P11171-2|EPB41;ENSG00000159023|ENST00000343067|EPB41	nc|ENSG00000159023|P11171-6|EPB41	nc|ENSG00000159023|P11171-6|EPB41	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	334.0360595583916	3	334.218666	999.634169	-1.7532	-0.00058594	-2.2235	-0.00074313	-3.9766	-0.0013291	334.55238453070274	41.504	0.32072	41.504	41.403	41.724	0					14	9	2	0	0	0	2.3239	1	17416	17416		0.45834	0	1	550320			27718	3514	13707	13764	31842	31842					0.13433755913263212
RAAKTVAH	8	Unmodified	_RAAKTVAH_					0	0	0		ENST00000530999.1_1_1:32193023-32200902:-|nuORF;ENST00000465256.5_1_1:32193589-32201220:-|nuORF;nc|ENSG00000121753|O60241-4|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;ENSG00000121753|ENST00000373658|ADGRB2	ENST00000530999.1_1_1:32193023-32200902:-|nuORF	ENST00000530999.1_1_1:32193023-32200902:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2547180056572	2	427.253769	852.492984	0.82369	0.00035193	0.26316	0.00011244	1.0869	0.00046436	427.2539911210151	70.197	1.1677	70.197	69.675	70.842	0					71	37	3	0	0	0	0.8909	1	29222	29222		2.0598	0	1	2920500			27719	2140	13708	13765	31843	31843					0.0608375753998871
RAAKTVAH	8	Unmodified	_RAAKTVAH_					0	0	0		ENST00000530999.1_1_1:32193023-32200902:-|nuORF;ENST00000465256.5_1_1:32193589-32201220:-|nuORF;nc|ENSG00000121753|O60241-4|ADGRB2;nc|ENSG00000121753|O60241-3|ADGRB2;nc|ENSG00000121753|O60241-2|ADGRB2;ENSG00000121753|ENST00000373658|ADGRB2	ENST00000530999.1_1_1:32193023-32200902:-|nuORF	ENST00000530999.1_1_1:32193023-32200902:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2549926638603	2	427.253769	852.492984	1.6025	0.00068468	-0.20793	-8.884E-05	1.3946	0.00059584	427.2538473260709	70.167	0.92102	70.489	69.878	70.799	0.32224					66	29	3	0	0	0	0.8909	1	29240	29240		2.0598	0	1	3333200			27720	2140	13708	13765	31844	31844					0.0608375753998871
RAALALAA	8	Unmodified	_RAALALAA_					0	0	0			REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	756.4735595583916	1	756.472649	755.465373	2.4885	0.0018825	-0.31652	-0.00023944	2.1719	0.001643	756.4719550363604	103.9	0.09845	104.06	104.01	104.11	0.16055					9	4	3	0	0	0	0.89178	1	43906	43906		0.69038	0	1	56746000	+		27721	11381	13709	13766	31845	31845					0.07785854279734394
RAALALAA	8	Unmodified	_RAALALAA_					0	0	0			REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	756.4735595583916	1	756.472649	755.465373	2.7472	0.0020781	-0.49408	-0.00037376	2.2531	0.0017044	756.4718776839599	103.87	0.099365	104.04	103.99	104.09	0.1731					9	4	3	0	0	0	0.89178	1	43830	43830		0.69038	0	1	62843000	+		27722	11381	13709	13766	31846	31846					0.07785854279734394
RAALLKKF	8	Unmodified	_RAALLKKF_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2118408083916	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.7	1	82.971	82.471	83.471	0.27029								0	0	0	1.0178	1	34584	34584		0.40072	0.40072	1				27723	1002	13710	13767	31847	31847					0.1373895116470294
RAALLKKF	8	Unmodified	_RAALLKKF_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2112609744072	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.855	1	83.125	82.625	83.625	0.27029								0	0	0	1.0178	1	34650	34650		1.6526	1.1943	1				27724	1002	13710	13767	31848	31848					0.1373895116470294
RAALLKKF	8	Unmodified	_RAALLKKF_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2115356326103	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.233	1	83.503	83.003	84.003	0.27029								0	0	0	1.0178	1	34809	34809		0.40072	0.40072	1				27725	1002	13710	13767	31849	31849					0.1373895116470294
RAALLKKF	8	Unmodified	_RAALLKKF_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2123290896416	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.436	1	84.697	84.197	85.197	0.26083								0	0	0	1.0178	1	35313	35313		0.40072	0.40072	1				27726	1002	13710	13767	31850	31850					0.1373895116470294
RAALLKKF	8	Unmodified	_RAALLKKF_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2122680544853	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.591	1	84.852	84.352	85.352	0.26083								0	0	0	1.0178	1	35376	35376		0.40072	0.40072	1				27727	1002	13710	13767	31851	31851					0.1373895116470294
RAALVLVV	8	Unmodified	_RAALVLVV_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	840.5688354372978	1	840.566549	839.559273	1.2237	0.0010286	-0.059706	-5.0187E-05	1.164	0.00097842	840.5664080050506	107.87	0.51904	107.87	107.47	107.99	0					67	27	5	0	0	0	0.89178	1	46290	46290		0.69038	0	1	3033099999.9999995			27728	998	13711	13768	31852	31852					0.13307573382030569
RAALVLVV	8	Unmodified	_RAALVLVV_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5666992068291	1	840.566549	839.559273	2.9135	0.002449	-2.1238	-0.0017852	0.78979	0.00066387	840.564639652433	107.81	0.52032	107.96	107.54	108.06	0.15781					64	28	5	0	0	0	0.89178	1	46514	46514		0.69038	0	1	5356100000			27729	998	13711	13768	31853	31853					0.13307573382030569
RAALVLVV	8	Unmodified	_RAALVLVV_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5682250857353	1	840.566549	839.559273	3.0348	0.0025509	-0.94619	-0.00079534	2.0886	0.0017556	840.5655805576565	106.16	0.70501	106.32	106.2	106.91	0.16174					68	35	5	0	0	0	0.89178	1	45379	45379		0.69038	0	1	591290000			27730	998	13711	13768	31854	31854					0.13307573382030569
RAAPLLLYA	9	Unmodified	_RAAPLLLYA_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant;LRP6|p.C603Sfs*12|1|0.05|ENSG00000070018|chr12:12164504-12164517|AGGTCTATAGAGGC/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3042175173759	2	494.302927	986.591301	1.7569	0.00086843	0.97229	0.0004806	2.7292	0.001349	494.3034819342797	48.171	0.37827	49.559	49.365	49.743	1.388					25	11	3	0	0	0	0.39927	1	20150	20150		20.454	5.6154	1	2103600			27731	846	13712	13769	31855	31855					0.09746941065179726
RAAPLLLYA	9	Unmodified	_RAAPLLLYA_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant;LRP6|p.C603Sfs*12|1|0.05|ENSG00000070018|chr12:12164504-12164517|AGGTCTATAGAGGC/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	494.302927	986.591301	2.5713	0.001271	-0.33485	-0.00016552	2.2365	0.0011055	494.3027441477681	47.647	0.36966	49.623	49.435	49.805	1.976	0.031958	-0.00064959	NaN	20.454	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2212600			27732	846	13712	13769							0.09746941065179726
RAARLRSPL	9	Unmodified	_RAARLRSPL_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2191955447197	3	347.220958	1038.64105	1.4128	0.00049055	-3.6515	-0.0012679	-2.2387	-0.00077733	347.2202430822788	44.737	0.34236	46.103	45.931	46.274	1.3653					15	10	2	0	0	0	0.82114	1	18769	18769		2.4985	0	1	1637100			27733	4542	13713	13770	31856	31856					0.12327068793820217
RAARLRSPL	9	Unmodified	_RAARLRSPL_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2203246951103	3	347.220958	1038.64105	1.0255	0.00035606	-4.089	-0.0014198	-3.0635	-0.0010637	347.2201937690736	45.246	0.4541	46.612	46.433	46.887	1.3653					32	13	3	0	0	0	0.78661	1	19027	19027		3.8763	2.683	1	2462100			27734	4542	13713	13770	31857	31857					0.12327068793820217
RAARLRSPL	9	Unmodified	_RAARLRSPL_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2200195193291	3	347.220958	1038.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.289	1	43.629	43.129	44.129	1.3399								0	0	0	0.42693	1	17729	17729		2.086	0	1				27735	4542	13713	13770	31858	31858					0.12327068793820217
RAARLRSPL	9	Unmodified	_RAARLRSPL_					0	0	0		nc|ENSG00000180264|Q7Z7M1|ADGRD2;ENSG00000180264|ENST00000696331|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	nc|ENSG00000180264|Q7Z7M1|ADGRD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	347.220958	1038.64105	1.8012	0.00062542	-2.4202	-0.00084033	-0.61895	-0.00021491	347.22068879121935	44.126	0.25302	46.069	45.893	46.146	1.9438	-0.016693	0.00072804	NaN	2.4985	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1485600			27736	4542	13713	13770							0.12327068793820217
RAARLSAK	8	Unmodified	_RAARLSAK_					0	0	0		HMGN2|p.S25A|1|0.07|ENSG00000198830|chr1:26473715-26473715|T/G|missense_variant	HMGN2|p.S25A|1|0.07|ENSG00000198830|chr1:26473715-26473715|T/G|missense_variant	HMGN2|p.S25A|1|0.07|ENSG00000198830|chr1:26473715-26473715|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7762328982353	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89051	1	30829	30829		2.3027	2.3027	1	532050000			27737	7650	13714	13771	31859	31859					0.0942773294835888
RAASIVLA	8	Unmodified	_RAASIVLA_					0	0	0		ENSG00000213965|ENST00000397061|NUDT19;NUDT19-SLC7A9|1|fusion	ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	800.5006591677666	1	800.498864	799.491587	2.7308	0.002186	-0.75202	-0.00060199	1.9788	0.001584	800.4980819391525	103.94	0.096924	104.1	104.03	104.13	0.16055					8	4	2	0	0	0	0.89008	1	43931	43931		2.5775	0	1	31856000			27738	5233	13715	13772	31860	31860					0.08382123451224288
RAASIVLA	8	Unmodified	_RAASIVLA_					0	0	0		ENSG00000213965|ENST00000397061|NUDT19;NUDT19-SLC7A9|1|fusion	ENSG00000213965|ENST00000397061|NUDT19	ENSG00000213965|ENST00000397061|NUDT19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	800.498864	799.491587	2.8985	0.0023202	-1.0535	-0.00084335	1.845	0.0014769	800.497165283094	103.9	0.099838	104.08	104.01	104.11	0.1731	0.030721	-0.00093049	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31987000			27739	5233	13715	13772							0.08382123451224288
RAELTGLARRL	11	Unmodified	_RAELTGLARRL_					0	0	0		ENSG00000275793|ENST00000619918|RIMBP3;ENSG00000274600|ENST00000620804|RIMBP3B;ENSG00000183246|ENST00000433039|RIMBP3C	ENSG00000275793|ENST00000619918|RIMBP3	ENSG00000275793|ENST00000619918|RIMBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3846313357353	2	628.383303	1254.75205	1.2793	0.0008039	-0.45253	-0.00028436	0.82678	0.00051954	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	1.0214	1	32716	32716		2.4985	0.65425	1	6175000			27740	4642	13716	13773	31861	31861					0.13486663711250912
RAEREAERA	9	Unmodified	_RAEREAERA_					0	0	0		ENST00000593076.1_1_17:73910704-73911112:-|nuORF;nc|ENSG00000188878|Q8TES7|FBF1;nc|ENSG00000188878|Q8TES7-5|FBF1;ENSG00000188878|ENST00000636174|FBF1	ENST00000593076.1_1_17:73910704-73911112:-|nuORF	ENST00000593076.1_1_17:73910704-73911112:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2538329958916	3	363.191616	1086.55302	2.419	0.00087857	0.70642	0.00025657	3.1254	0.0011351	363.1916171666921	59.548	0.17751	61.517	61.405	61.582	1.969					7	5	2	0	0	0	0.11833	1	24991	24991		0	0	1	496770			27741	4882	13717	13774	31862	31862					0.013204034125692488
RAFEYEIRF	9	Unmodified	_RAFEYEIRF_					0	0	0		ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B;ENST00000559414.5_1_15:40453280-40468691:+|nuORF;BUB1B-EIF2AK4|1|fusion;nc|ENSG00000156970|O60566-2|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8190795779228	2	615.81693	1229.61931	2.1271	0.0013099	0.049719	3.0618E-05	2.1768	0.0013405	615.8171606933097	45.251	0.35788	46.616	46.464	46.822	1.3653					27	10	3	0	0	0	0.10993	2	18978	18928;18978		46.022	9.5161	1	2393400			27742	3459	13718	13775	31863;31864	31864					0.013682192545729777
RAFEYEIRF	9	Unmodified	_RAFEYEIRF_					0	0	0		ENSG00000156970|ENST00000287598|BUB1B;nc|ENSG00000156970|O60566-3|BUB1B;ENST00000559414.5_1_15:40453280-40468691:+|nuORF;BUB1B-EIF2AK4|1|fusion;nc|ENSG00000156970|O60566-2|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	ENSG00000156970|ENST00000287598|BUB1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8179199099541	2	615.81693	1229.61931	1.8226	0.0011224	0.19546	0.00012037	2.0181	0.0012428	615.8171034554274	44.713	0.6044	46.672	46.448	47.052	1.9596					35	18	3	0	0	0	0.17733	3	18738	18685;18738;18793		35.612	4.9757	1	1715600			27743	3459	13718	13775	31865;31866;31867	31866					0.013682192545729777
RAFGIPIRV	9	Unmodified	_RAFGIPIRV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8228027224541	2	514.821818	1027.62908	1.9649	0.0010116	-0.3848	-0.0001981	1.5801	0.00081347	514.8217326997595	42.69	0.81223	44.03	43.764	44.576	1.3399					96	25	6	0	0	0	0.033504	5	17869	17822;17869;17908;17947;17987		81.89	51.665	1	176560000			27744	179	13719	13776	31868;31869;31870;31871;31872	31869					0.11637452050649699
RAFGIPIRV	9	Unmodified	_RAFGIPIRV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.5505248904228	3	343.550304	1027.62908	0.45837	0.00015747	0.23501	8.0737E-05	0.69338	0.00023821	343.5505111610876	42.689	0.66071	44.029	43.764	44.425	1.3399					70	20	5	0	0	0	0.083604	4	17882	17839;17882;17921;17960		41.956	19.219	1	98157000			27745	179	13719	13776	31873;31874;31875;31876	31874					0.11637452050649699
RAFGIPIRV	9	Unmodified	_RAFGIPIRV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8230468630791	2	514.821818	1027.62908	2.3753	0.0012229	-1.6851	-0.00086753	0.69021	0.00035533	514.8224387128736	43.774	1.4366	45.128	44.825	46.262	1.3536					58	45	2	0	0	0	0.51189	1	18395	18395		14.838	0	1	2563200			27746	179	13719	13776	31877	31877					0.11637452050649699
RAFGIPIRV	9	Unmodified	_RAFGIPIRV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8224365115166	2	514.821818	1027.62908	1.9592	0.0010086	-0.93772	-0.00048276	1.0215	0.00052588	514.8214576077853	42.104	0.71368	44.026	43.795	44.509	1.9211					75	22	5	0	0	0	0.073578	4	17633	17584;17633;17672;17711		58.679	31.798	1	217960000			27747	179	13719	13776	31878;31879;31880;31881	31879					0.11637452050649699
RAFGIPIRV	9	Unmodified	_RAFGIPIRV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5503112673759	3	343.550304	1027.62908	1.196	0.00041088	-1.1992	-0.00041199	-0.0032312	-1.1101E-06	343.54993454808766	42.105	0.46247	44.026	43.795	44.258	1.9211					49	14	5	0	0	0	0.059546	4	17634	17596;17634;17673;17712		49.554	25.534	1	67727000			27748	179	13719	13776	31882;31883;31884;31885	31883					0.11637452050649699
RAFGIPIRVY	10	Unmodified	_RAFGIPIRVY_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.3521606326103	2	596.353483	1190.69241	2.2281	0.0013287	0.41054	0.00024483	2.6386	0.0015736	596.3538415215089	47.138	0.41188	48.52	48.251	48.663	1.3825					20	12	2	0	0	0	0.60583	1	19744	19744		22.736	12.662	1	944210			27749	179	13720	13777	31886	31886					0.10469392767890895
RAFKLKRV	8	Unmodified	_RAFKLKRV_					0	0	0			REV__nc|ENSG00000144366|Q9UBP9-2|GULP1	REV__nc|ENSG00000144366|Q9UBP9-2|GULP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3388244509697	2	509.337636	1016.66072	3.5043	0.0017849	-0.69136	-0.00035214	2.813	0.0014327	509.337045186255	108.99	0.22156	109.15	109.03	109.25	0.15898					26	10	3	0	0	0	0.89178	1	47287	47287		0.69038	0	1	54727000	+		27750	10245	13721	13778	31887	31887					0.1530544480459639
RAFLSLLKL	9	Unmodified	_RAFLSLLKL_					0	0	0			REV__tr|A0A553SRV3|A0A553SRV3_NIACIPTSfructosetransportersubunitIIAOS=NialliacirculansOX=1397GN=CEQ21_01890PE=4SV=1	REV__tr|A0A553SRV3|A0A553SRV3_NIACIPTSfructosetransportersubunitIIAOS=NialliacirculansOX=1397GN=CEQ21_01890PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699951052666	3	354.234093	1059.68045	-0.87064	-0.00030841	-1.1464	-0.00040608	-2.017	-0.00071449	354.56813616846165	58.64	1.2837	58.64	57.69	58.974	0					59	39	2	0	0	0	0.11916	1	24339	24339		0.20686	0	1	2573200	+		27751	15176	13722	13779	31888	31888					0.15299776024676248
RAFPLPMSF	9	Unmodified	_RAFPLPMSF_					0	0	0		ENSG00000197417|ENST00000225519|SHPK	ENSG00000197417|ENST00000225519|SHPK	ENSG00000197417|ENST00000225519|SHPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2832519412041	2	533.281137	1064.54772	1.9066	0.0010167	2.6258	0.0014003	4.5323	0.002417	533.2825031483445	66.717	0.43962	68.106	67.903	68.343	1.3888					25	13	2	0	0	0	0.17276	1	27995	27995		36.127	15.673	1	1770000			27752	5004	13723	13780	31889	31889					0.018030082964060057
RAFPLPMSF	9	Unmodified	_RAFPLPMSF_					0	0	0		ENSG00000197417|ENST00000225519|SHPK	ENSG00000197417|ENST00000225519|SHPK	ENSG00000197417|ENST00000225519|SHPK	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	533.281137	1064.54772	1.9588	0.0010446	4.168	0.0022227	6.1268	0.0032673	533.2838587515239	66.258	0.53339	68.147	67.808	68.341	1.8889	0.020424	0.0011282	NaN	36.127	38	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2136300			27753	5004	13723	13780							0.018030082964060057
RAFRKKEW	8	Unmodified	_RAFRKKEW_					0	0	0		ENST00000588221.5_1_19:9545477-9546142:-|nuORF	ENST00000588221.5_1_19:9545477-9546142:-|nuORF	ENST00000588221.5_1_19:9545477-9546142:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2176086306572	3	374.217325	1119.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.009	1	90.218	89.718	90.718	0.20904								0	0	0	1.0178	1	37718	37718		0.40072	0	1				27754	7465	13724	13781	31890	31890					0.07511666419554786
RAFVHWYV	8	Unmodified	_RAFVHWYV_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000183785|Q9NY65-2|TUBA8;ENSG00000183785|ENST00000330423|TUBA8;ENST00000530835.1_1_11:90016856-90017168:+|nuORF	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7854492068291	2	539.285069	1076.55558	2.4444	0.0013183	-1.3677	-0.0007376	1.0767	0.00058065	539.2852126851974	39.347	0.25758	40.644	40.475	40.732	1.2961					16	7	3	0	0	0	0.88055	2	16508	16481;16508		8.5933	2.3875	1	675100			27755	2190	13725	13782	31891;31892	31892					0.020369036081547165
RAFVHWYV	8	Unmodified	_RAFVHWYV_					0	0	0		ENSG00000123416|ENST00000336023|TUBA1B;ENSG00000167553|ENST00000301072|TUBA1C;ENSG00000167552|ENST00000301071|TUBA1A;nc|ENSG00000167552|Q71U36-2|TUBA1A;ENSG00000075886|ENST00000321253|TUBA3D;ENSG00000198033|ENST00000400113|TUBA3C;nc|ENSG00000123416|P68363-2|TUBA1B;ENSG00000127824|ENST00000248437|TUBA4A;nc|ENSG00000127824|P68366-2|TUBA4A;nc|ENSG00000183785|Q9NY65-2|TUBA8;ENSG00000183785|ENST00000330423|TUBA8;ENST00000530835.1_1_11:90016856-90017168:+|nuORF	ENSG00000123416|ENST00000336023|TUBA1B	ENSG00000123416|ENST00000336023|TUBA1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2848998904228	2	539.285069	1076.55558	1.3713	0.00073951	-0.18534	-9.9949E-05	1.1859	0.00063956	539.2851999193588	38.765	0.35356	40.602	40.398	40.751	1.8366					18	10	3	0	0	0	0.88055	1	16242	16242		8.5933	2.2392	1	402560			27756	2190	13725	13782	31893	31893					0.020369036081547165
RAGAGKPR	8	Unmodified	_RAGAGKPR_					0	0	0			REV__ENST00000494263.5_1_2:219646839-219678911:+|nuORF	REV__ENST00000494263.5_1_2:219646839-219678911:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.7468749880791	2	406.746111	811.477669	1.9877	0.00080847	-0.56688	-0.00023058	1.4208	0.0005779	406.7461590804237	79.846	0.53662	80.147	79.942	80.478	0.30047					27	16	2	0	0	0	0.89178	1	33416	33416		0.69038	0	1	1355300	+		27757	13451	13726	13783	31894	31894					0.06438890742788317
RAGCEEEAR	9	Unmodified	_RAGCEEEAR_					0	0	0		ENST00000477267.1_1_10:102824694-102827451:+|nuORF;ENST00000465807.1_1_10:102826065-102827451:+|nuORF	ENST00000477267.1_1_10:102824694-102827451:+|nuORF	ENST00000477267.1_1_10:102824694-102827451:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	341.2231628298759	3	340.822424	1019.44544	-1.2333	-0.00042032	0.019343	6.5926E-06	-1.2139	-0.00041373	340.8221274453808	48.676	2.2634	48.676	47.149	49.413	0					115	71	2	0	0	0	0.11944	1	19875	19875		0	0	1	2024200			27758	6699	13727	13784	31895	31895					-0.06350309513175034
RAGLRRLA	8	Unmodified	_RAGLRRLA_					0	0	0			REV__ENSG00000169217|ENST00000305596|CD2BP2	REV__ENSG00000169217|ENST00000305596|CD2BP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8648559451103	3	304.866515	911.577717	-3.0445	-0.00092817	-2.0204	-0.00061594	-5.0649	-0.0015441	304.86583411469604	23.125	0.27409	23.125	22.986	23.26	0					21	8	4	0	0	0	0.89187	1	9629	9629		0.40072	0	1	5378200	+		27759	10936	13728	13785	31896	31896					0.11839128076587713
RAGMSFVDR	9	Unmodified	_RAGMSFVDR_					0	0	0			REV__tr|A0A553SGN3|A0A553SGN3_NIACIPhosphoribosylformylglycinamidinesynthasesubunitPurLOS=NialliacirculansOX=1397GN=purLPE=3SV=1	REV__tr|A0A553SGN3|A0A553SGN3_NIACIPhosphoribosylformylglycinamidinesynthasesubunitPurLOS=NialliacirculansOX=1397GN=purLPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.8439514040947	3	346.843159	1037.50765	1.3136	0.00045562	1.6553	0.00057412	2.9689	0.0010297	346.8438759118751	78.167	0.44995	79.448	79.259	79.709	1.2809					47	14	4	0	0	0	0.63129	1	32823	32823		6.6304	1.7334	1	2433300	+		27760	14759	13729	13786	31897	31897					-0.00960538374170028
RAGPYCGP	8	Unmodified	_RAGPYCGP_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.6906310915947	2	410.692155	819.369758	0.45912	0.00018856	-3.1855	-0.0013083	-2.7264	-0.0011197	410.69062851279017	67.195	0.54819	67.195	66.924	67.473	0					48	17	3	0	0	0	0.89176	1	27961	27961		0.79363	0	1	34356000	+		27761	11398	13730	13787	31898	31898					-0.04715241902795242
RAGPYCGP	8	Unmodified	_RAGPYCGP_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.6915771365166	2	410.692155	819.369758	1.8225	0.00074849	-1.5757	-0.00064714	0.24677	0.00010135	410.6911002239902	66.044	0.57721	67.443	67.152	67.73	1.3989					45	18	3	0	0	0	0.89176	1	27704	27704		0.79363	0	1	7889700	+		27762	11398	13730	13787	31899	31899					-0.04715241902795242
RAGSLPRL	8	Unmodified	_RAGSLPRL_					0	0	0			REV__ENST00000233638.7_1_2:74741693-74741879:+|nuORF	REV__ENST00000233638.7_1_2:74741693-74741879:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2711059451103	2	435.269419	868.524284	2.8491	0.0012401	0.72588	0.00031595	3.5749	0.0015561	435.26967923758156	84.045	0.43355	84.306	84.067	84.501	0.26083					25	13	2	0	0	0	0.8873	2	35171	35106;35171		4.3292	0	1	1803100	+		27763	12110	13731	13788	31900;31901	31901					0.08476330574092117
RAHGAGVPH	9	Unmodified	_RAHGAGVPH_					0	0	0		ENST00000434316.6_1_13:114193706-114203864:+|nuORF;ENST00000460039.5_1_13:114200078-114203864:+|nuORF	ENST00000434316.6_1_13:114193706-114203864:+|nuORF	ENST00000434316.6_1_13:114193706-114203864:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1645385622978	3	301.163221	900.467832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.019	1	84.28	83.78	84.78	0.26083								0	0	0	0.42693	1	35142	35142		0.26902	0	1				27764	6518	13732	13789	31902	31902					0.0136170273742664
RAIKFLSTKLK	11	Unmodified	_RAIKFLSTKLK_					0	0	0		nc|ENSG00000166181|Q9BZZ5-3|API5;nc|ENSG00000166181|Q9BZZ5-5|API5;SDHAF2-API5|3|fusion;nc|ENSG00000166181|Q9BZZ5-2|API5;nc|ENSG00000166181|Q9BZZ5-1|API5;SDHAF2-API5|2|fusion;nc|ENSG00000166181|Q9BZZ5-6|API5;ENSG00000166181|ENST00000531273|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	nc|ENSG00000166181|Q9BZZ5-3|API5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.0083801150322	4	326.965774	1303.83399	1.1063	0.00036172	-3.1489	-0.0010296	-2.0426	-0.00066785	327.21509234715927	49.238	0.72863	49.568	49.224	49.953	0.33019					31	23	2	0	0	0	0.14606	1	20578	20578		0	0	1	870070			27765	3885	13733	13790	31903	31903					0.19422766070351827
RAIKLALCRK	10	Unmodified	_RAIKLALCRK_					0	0	0			REV__ENST00000429588.1_1_21:37852808-37852883:+|nuORF	REV__ENST00000429588.1_1_21:37852808-37852883:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2846557497978	3	391.253382	1170.73832	1.9353	0.00075718	3.5135	0.0013747	5.4488	0.0021319	391.5877080959135	40.527	0.18843	42.389	42.265	42.453	1.8624					8	5	2	0	0	0	0.1256	1	16960	16960		0.69767	0	1	813800	+		27766	13017	13734	13791	31904	31904					0.15977714678456323
RAIRRDQFFR	10	Unmodified	_RAIRRDQFFR_					0	0	0			REV__nc|ENSG00000144504|Q9P2S6-4|ANKMY1	REV__nc|ENSG00000144504|Q9P2S6-4|ANKMY1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	455.1912109255791	3	455.593455	1363.75853	3.2893	0.0014986	-0.80247	-0.0003656	2.4869	0.001133	455.5929299850838	94.936	0.65526	95.059	94.678	95.333	0.12331					41	20	3	0	0	0	0.1256	1	39684	39684		0.69767	0	1	849820	+		27767	10251	13735	13792	31905	31905					0.09120601662630179
RAIVQKRLKK	10	Unmodified	_RAIVQKRLKK_					0	0	0		nc|ENSG00000276644|Q9UI36-4|DACH1;nc|ENSG00000276644|Q9UI36-3|DACH1;ENSG00000276644|ENST00000613252|DACH1;nc|ENSG00000276644|Q9UI36|DACH1	nc|ENSG00000276644|Q9UI36-4|DACH1	nc|ENSG00000276644|Q9UI36-4|DACH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4246093630791	2	620.422231	1238.82991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.486	1	83.486	82.986	83.986	0								0	0	0	0.6624	1	34788	34788		0.40072	0	1				27768	5468	13736	13793	31906	31906					0.22004721367306956
RAKAQMPTI	9	Unmodified	_RAKAQMPTI_					0	0	0		nc|ENSG00000196954|P49662-2|CASP4;ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104815482-104817977:-|nuORF	nc|ENSG00000196954|P49662-2|CASP4	nc|ENSG00000196954|P49662-2|CASP4	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2924682497978	2	508.289494	1014.56443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.89	1	112.94	112.44	113.44	0.044189								0	0	0	0.40883	1	48640	48640		7.9102	2.1497	1				27769	4971	13737	13794	31907	31907					0.05773509182336056
RAKDVRRPAA	10	Unmodified	_RAKDVRRPAA_					0	0	0			REV__ENST00000559000.5_1_15:57210403-57210766:-|nuORF	REV__ENST00000559000.5_1_15:57210403-57210766:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3423339724541	2	570.341438	1138.66832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.95	1	97.95	97.45	98.45	0								0	0	0	0.66185	1	40952	40952		1.3295	0	1		+		27770	13888	13738	13795	31908	31908					0.10453552334229244
RAKEQLRPKV	10	Unmodified	_RAKEQLRPKV_					0	0	0		tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	612.8806030154228	2	612.880396	1223.74624	2.3494	0.0014399	-2.3509	-0.0014408	-0.0014774	-9.0547E-07	612.8789699738813	92.457	0.54774	92.457	92.164	92.712	0					69	17	5	0	0	0	0.89803	1	38556	38556		1.1933	0.735	1	43255000			27771	16106	13739	13796	31909	31909					0.14331565199586294
RAKERRPIAV	10	Unmodified	_RAKERRPIAV_					0	0	0		chr19:54172083-54172925|121|10.75|0.05|7.71|-|1|TMC4,None|1	chr19:54172083-54172925|121|10.75|0.05|7.71|-|1|TMC4,None|1	chr19:54172083-54172925|121|10.75|0.05|7.71|-|1|TMC4,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2532531619072	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.846	1	82.126	81.626	82.626	0.2802								0	0	0	0.66161	1	34222	34222		1.7423	0.63252	1				27772	234	13740	13797	31910	31910					0.14134698402403956
RAKFLRPS	8	Unmodified	_RAKFLRPS_					0	0	0		nc|ENSG00000152404|Q2TBE0-3|CWF19L2;nc|ENSG00000152404|Q2TBE0-2|CWF19L2;ENSG00000152404|ENST00000282251|CWF19L2	nc|ENSG00000152404|Q2TBE0-3|CWF19L2	nc|ENSG00000152404|Q2TBE0-3|CWF19L2	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7992431521416	2	487.798343	973.582134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.52	1	104.68	104.18	105.18	0.16055								0	0	0	1.0178	1	44294	44294		4.756	0	1				27773	3326	13741	13798	31911	31911					0.0942859249950061
RAKFRRNLLR	10	Unmodified	_RAKFRRNLLR_					0	0	0		ENSG00000106689|ENST00000373615|LHX2;nc|ENSG00000143355|Q9NQ69-2|LHX9;ENSG00000143355|ENST00000367387|LHX9	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	665.4235107302666	2	665.420554	1328.82655	3.8273	0.0025467	3.7522	0.0024968	7.5795	0.0050435	665.4228586391046	95.375	0.33142	95.796	95.675	96.006	0.4212					22	12	3	0	0	0	0.89803	1	40142	40142		1.6526	0	1	3010100			27774	1582	13742	13799	31912	31912					0.1752947131330984
RAKFRRNLLR	10	Unmodified	_RAKFRRNLLR_					0	0	0		ENSG00000106689|ENST00000373615|LHX2;nc|ENSG00000143355|Q9NQ69-2|LHX9;ENSG00000143355|ENST00000367387|LHX9	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	665.420554	1328.82655	3.0616	0.0020373	1.3282	0.00088382	4.3898	0.0029211	665.4211323826815	95.15	0.27541	95.553	95.385	95.66	0.40208	-0.12163	-0.0012928	NaN	1.6526	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4686000			27775	1582	13742	13799							0.1752947131330984
RAKGPARA	8	Unmodified	_RAKGPARA_					0	0	0			REV__ENST00000360614.7_1_19:5719818-5720154:-|nuORF	REV__ENST00000360614.7_1_19:5719818-5720154:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	413.1782714724541	2	413.753936	825.493319	3.6167	0.0014964	-2.6854	-0.0011111	0.93135	0.00038535	413.7532015265577	81.482	0.39949	83.178	82.983	83.383	1.6959					16	12	2	0	0	0	2.3239	1	34118	34118		0.6015	0	1	331820	+		27776	12594	13743	13800	31913	31913					0.07359177259831995
RAKGRLTA	8	Unmodified	_RAKGRLTA_					0	0	0			REV__ENSG00000157303|ENST00000375472|SUSD3	REV__ENSG00000157303|ENST00000375472|SUSD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	872.5424072146416	1	872.54246	871.535184	1.7221	0.0015026	-1.7992	-0.0015699	-0.077142	-6.731E-05	872.540770733529	73.507	0.51829	73.507	73.216	73.734	0					45	16	4	0	0	0	0.89198	1	30637	30637		0	0	1	17822000	+		27777	10535	13744	13801	31914	31914					0.09427732948347511
RAKGRLTA	8	Unmodified	_RAKGRLTA_					0	0	0			REV__ENSG00000157303|ENST00000375472|SUSD3	REV__ENSG00000157303|ENST00000375472|SUSD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	872.5423461794853	1	872.54246	871.535184	2.2635	0.001975	-1.5055	-0.0013136	0.758	0.00066138	872.5409647205555	73.26	0.509	73.585	73.34	73.849	0.32494					41	16	4	0	0	0	0.89198	2	30630	30630;30679		0	0	1	20973000	+		27778	10535	13744	13801	31915;31916	31915					0.09427732948347511
RAKGRLTA	8	Unmodified	_RAKGRLTA_					0	0	0			REV__ENSG00000157303|ENST00000375472|SUSD3	REV__ENSG00000157303|ENST00000375472|SUSD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7759582400322	2	436.774868	871.535184	2.7407	0.0011971	-0.041041	-1.7926E-05	2.6997	0.0011792	436.77476511149257	71.995	1.1131	73.819	73.507	74.62	1.8239					86	35	5	0	0	0	0.89198	2	30197	30197;30249		0	0	1	171310000	+		27779	10535	13744	13801	31917;31918	31917					0.09427732948347511
RAKKKKKK	8	Unmodified	_RAKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026;L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|3|1|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1014.713549792767	1	1014.72584	1013.71857	0.78307	0.0007946	-3.717	-0.0037718	-2.934	-0.0029772	1014.7238143865312	34.607	0.046768	36.429	36.406	36.453	1.8227					5	4	2	0	0	0	0.89198	1	14505	14505		0	0	1	12835000			27780	4650	13745	13802	31919	31919					0.21225706730024285
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3096191287041	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.12	1	104.12	103.62	104.62	0								0	0	0	0.66264	1	43881	43881		0	0	1				27781	4650	13746	13803	31920	31920					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3063537478447	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	104.96	104.46	105.46	0								0	0	0	0.66264	1	44436	44436		0	0	1				27782	4650	13746	13803	31921	31921					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3089172244072	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.07	1	105.07	104.57	105.57	0								0	0	0	0.66264	1	44514	44514		0	0	1				27783	4650	13746	13803	31922	31922					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3100768923759	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.17	104.67	105.67	0								0	0	0	0.66264	1	44581	44581		0	0	1				27784	4650	13746	13803	31923	31923					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3094360232353	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.32	1	115.32	114.82	115.82	0								0	0	0	0.66264	1	49766	49766		0	0	1				27785	4650	13746	13803	31924	31924					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3086120486259	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.62	1	115.62	115.12	116.12	0								0	0	0	0.66264	1	49893	49893		0	0	1				27786	4650	13746	13803	31925	31925					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3083984255791	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.18	1	112.23	111.73	112.73	0.04554								0	0	0	0.66264	1	48358	48358		0	0	1				27787	4650	13746	13803	31926	31926					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3099243044853	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.57	1	112.62	112.12	113.12	0.04554								0	0	0	0.66264	1	48513	48513		0	0	1				27788	4650	13746	13803	31927	31927					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3097106814384	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.06	1	113.11	112.61	113.61	0.044189								0	0	0	0.66264	1	48708	48708		0	0	1				27789	4650	13746	13803	31928	31928					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3101074099541	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.19	1	113.23	112.73	113.73	0.044189								0	0	0	0.66264	1	48759	48759		0	0	1				27790	4650	13746	13803	31929	31929					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3098022341728	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.39	1	113.43	112.93	113.93	0.044189								0	0	0	0.66264	1	48838	48838		0	0	1				27791	4650	13746	13803	31930	31930					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3096801638603	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.77	1	113.82	113.32	114.32	0.044189								0	0	0	0.66264	1	48994	48994		0	0	1				27792	4650	13746	13803	31931	31931					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3094970583916	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.93	1	113.97	113.47	114.47	0.044189								0	0	0	0.66264	1	49056	49056		0	0	1				27793	4650	13746	13803	31932	31932					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3100158572197	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.38	1	114.42	113.92	114.92	0.042839								0	0	0	0.66264	1	49238	49238		0	0	1				27794	4650	13746	13803	31933	31933					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3092834353447	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.51	1	114.55	114.05	115.05	0.042839								0	0	0	0.66264	1	49292	49292		0	0	1				27795	4650	13746	13803	31934	31934					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3097106814384	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.71	1	114.75	114.25	115.25	0.042839								0	0	0	0.66264	1	49370	49370		0	0	1				27796	4650	13746	13803	31935	31935					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3094665408134	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.84	1	114.88	114.38	115.38	0.042839								0	0	0	0.66264	1	49424	49424		0	0	1				27797	4650	13746	13803	31936	31936					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3094360232353	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.29	1	115.34	114.84	115.84	0.041786								0	0	0	0.66264	1	49605	49605		0	0	1				27798	4650	13746	13803	31937	31937					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3096496462822	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.42	1	115.47	114.97	115.97	0.041786								0	0	0	0.66264	1	49657	49657		0	0	1				27799	4650	13746	13803	31938	31938					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3093139529228	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.72	1	115.76	115.26	116.26	0.041786								0	0	0	0.66264	1	49775	49775		0	0	1				27800	4650	13746	13803	31939	31939					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3097411990166	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.11	1	116.15	115.65	116.65	0.041786								0	0	0	0.66264	1	49931	49931		0	0	1				27801	4650	13746	13803	31940	31940					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3102294802666	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.4	1	116.44	115.94	116.94	0.041084								0	0	0	0.66264	1	50048	50048		0	0	1				27802	4650	13746	13803	31941	31941					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3091918826103	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.72	1	116.76	116.26	117.26	0.041039								0	0	0	0.66264	1	50178	50178		0	0	1				27803	4650	13746	13803	31942	31942					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3096191287041	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.88	1	116.92	116.42	117.42	0.041039								0	0	0	0.66264	1	50241	50241		0	0	1				27804	4650	13746	13803	31943	31943					0.2843357367239605
RAKKKKKKKK	10	Unmodified	_RAKKKKKKKK_					0	0	0		ENSG00000183354|ENST00000399933|KIAA2026	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|67|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3357726931572	3	424.310108	1269.90849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.37	1	101.56	101.06	102.06	0.19076								0	0	0	0.66264	1	42624	42624		0	0	1				27805	4650	13746	13803	31944	31944					0.2843357367239605
RAKLNWLSV	9	Unmodified	_RAKLNWLSV_					0	0	0		SARNP-PTGES3|1|fusion;nc|ENSG00000110958|Q15185-4|PTGES3;ENSG00000110958|ENST00000262033|PTGES3;ENST00000537473.2_1_12:57059942-57081218:-|nuORF	SARNP-PTGES3|1|fusion	SARNP-PTGES3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8240844607353	2	543.824558	1085.63456	2.2551	0.0012264	-1.5738	-0.00085589	0.68123	0.00037047	543.8236246672268	39.195	0.28789	40.491	40.413	40.701	1.2961					12	8	2	0	0	0	0.39927	1	16455	16455		20.454	3.5113	1	755430			27806	1723	13747	13804	31945	31945					0.09517130842459665
RALFRKARA	9	Unmodified	_RALFRKARA_					0	0	0		ENST00000486331.1_1_22:41716661-41728273:+|nuORF;ZC3H7B|p.V284Cfs*8|1|0.22|ENSG00000100403|chr22:41339848-41339848|C/-|frameshift_variant;ZC3H7B|p.A319Rfs*58|1|0.16|ENSG00000100403|chr22:41339947-41339948|-/C|frameshift_variant;ZC3H7B|p.F502Lfs*32|1|0.11|ENSG00000100403|chr22:41346045-41346046|-/T|frameshift_variant;ZC3H7B-SLC9A8|1|fusion;ENSG00000100403|ENST00000352645|ZC3H7B	ENST00000486331.1_1_22:41716661-41728273:+|nuORF	ENST00000486331.1_1_22:41716661-41728273:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2535278201103	3	363.564836	1087.67268	1.5349	0.00055804	1.3173	0.00047892	2.8522	0.001037	363.5652922506132	52.909	0.99208	53.231	52.922	53.914	0.32283					52	32	2	0	0	0	0.11944	1	22445	22445		0	0	1	5268100			27807	1275	13748	13805	31946	31946					0.1323506154781171
RALINMSS	8	Unmodified	_RALINMSS_					0	0	0		ENST00000575815.5_1_17:3728158-3732552:-|nuORF;ENSG00000074356|ENST00000389005|NCBP3	ENST00000575815.5_1_17:3728158-3732552:-|nuORF	ENST00000575815.5_1_17:3728158-3732552:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	446.1221801638603	2	446.23947	890.464386	3.1316	0.0013975	3.948	0.0017617	7.0796	0.0031592	446.24092406172514	74.686	0.31005	75.011	74.864	75.174	0.32464					14	9	2	0	0	0	2.3239	1	31296	31296		0.6015	0	1	799780			27808	914	13749	13806	31947	31947					0.014772718485573932
RALKLIIR	8	Unmodified	_RALKLIIR_					0	0	0		nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-5|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3;nc|ENSG00000133318|O95197-2|RTN3;ENSG00000133318|ENST00000377819|RTN3	nc|ENSG00000133318|O95197-3|RTN3	nc|ENSG00000133318|O95197-3|RTN3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	491.4314453005791	2	491.847836	981.681119	3.4349	0.0016894	0.98703	0.00048547	4.4219	0.0021749	491.8484810519539	109.07	0.16189	109.12	109.06	109.22	0.050644					9	6	2	0	0	0	2.3239	1	46978	46978		0.69038	0	1	5377700			27809	2568	13750	13807	31948	31948					0.18954615464429025
RALKLIIR	8	Unmodified	_RALKLIIR_					0	0	0		nc|ENSG00000133318|O95197-3|RTN3;nc|ENSG00000133318|O95197-5|RTN3;nc|ENSG00000133318|O95197-4|RTN3;nc|ENSG00000133318|O95197-7|RTN3;nc|ENSG00000133318|O95197-2|RTN3;ENSG00000133318|ENST00000377819|RTN3	nc|ENSG00000133318|O95197-3|RTN3	nc|ENSG00000133318|O95197-3|RTN3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	491.847836	981.681119	1.0031	0.00049336	2.3837	0.0011724	3.3868	0.0016658	491.8488427660047	109.13	0.16857	109.13	109.02	109.19	0	0.0060633	0.00041853	NaN	0.69038	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4971400			27810	2568	13750	13807							0.18954615464429025
RALKLLAT	8	Unmodified	_RALKLLAT_					0	0	0		P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.2993652224541	2	443.297645	884.580737	3.3777	0.0014973	0.71163	0.00031546	4.0893	0.0018128	443.2978922533356	109.36	0.40385	109.52	109.25	109.65	0.15898					43	18	3	0	0	0	0.89178	1	47491	47491		0.69038	0	1	54246000			27811	8047	13751	13808	31949	31949					0.13382958410761603
RALKLLAT	8	Unmodified	_RALKLLAT_					0	0	0		P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	P3H1|p.T10A|1|0.09|ENSG00000117385|chr1:42766944-42766944|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.2992736697197	2	443.297645	884.580737	3.3663	0.0014923	1.278	0.00056655	4.6443	0.0020588	443.29821454094593	109.29	0.44921	109.44	109.15	109.6	0.1548					47	20	4	0	0	0	0.89178	2	47345	47345;47418		0.69038	0	1	42459000			27812	8047	13751	13808	31950;31951	31950					0.13382958410761603
RALLQSVRRP	10	Unmodified	_RALLQSVRRP_					0	0	0		ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	ENSG00000169258|ENST00000303991|GPRIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2498351931572	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.44	1	23.44	22.94	23.94	0								0	0	0	0.66227	1	9771	9771		0.62683	0	1				27813	4079	13752	13809	31952	31952					0.14134698402403956
RALPKIVAALP	11	Unmodified	_RALPKIVAALP_					0	0	0			REV__ENSG00000176986|ENST00000345254|SEC24C	REV__ENSG00000176986|ENST00000345254|SEC24C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8791992068291	2	574.879333	1147.74411	3.1009	0.0017826	-2.509	-0.0014424	0.5919	0.00034027	574.8778518930845	105.99	0.21122	106.15	106.04	106.25	0.15859					32	10	5	0	0	0	1.0393	1	45303	45303		0.35063	0	1	812550000	+		27814	11200	13753	13810	31953	31953					0.17615136461790826
RALRARQHR	9	Unmodified	_RALRARQHR_					0	0	0			REV__ENST00000393977.7_2_5:159738959-159739503:-|nuORF	REV__ENST00000393977.7_2_5:159738959-159739503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3544799685478	2	582.352671	1162.69079	2.2724	0.0013233	1.7522	0.0010204	4.0245	0.0023437	582.3535400939439	90.486	0.58612	90.486	90.193	90.779	0					67	18	5	0	0	0	0.8523	1	37746	37746		0.52476	0.066424	1	57051000	+		27815	12823	13754	13811	31954	31954					0.1159519652248946
RALRLLMGR	9	Unmodified	_RALRLLMGR_					0	0	0			REV__chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28	REV__chr16:370225-370310|429|20.88|0.73|4.83|-|ENST00000450882|MRPL28,MRPL28	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2540771365166	3	362.562327	1084.66515	1.6889	0.00061234	4.0839	0.0014807	5.7728	0.002093	362.563910104707	80.494	0.30972	80.784	80.655	80.964	0.29055					16	9	2	0	0	0	0.11941	1	33723	33723		1.0715	0	1	349850	+		27816	8267	13755	13812	31955	31955					0.126205859558695
RALRPVPRN	9	Unmodified	_RALRPVPRN_					0	0	0		ENST00000481677.1_1_1:160808287-160808924:-|nuORF	ENST00000481677.1_1_1:160808287-160808924:-|nuORF	ENST00000481677.1_1_1:160808287-160808924:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.8338500857353	2	539.833249	1077.65194	1.6164	0.00087257	0.035741	1.9294E-05	1.6521	0.00089186	539.8333612615197	78.597	0.55887	78.597	78.409	78.968	0					42	17	4	0	0	0	0.85019	1	32695	32695		0.52476	0	1	1743300			27817	6826	13756	13813	31956	31956					0.11622471168129778
RAPIVLLSHFV	11	Unmodified	_RAPIVLLSHFV_					0	0	0			REV__TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	REV__TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9234802126884	3	417.923919	1250.74993	0.77599	0.00032431	-2.148	-0.00089771	-1.372	-0.00057341	417.9228162406104	94.386	0.49126	94.386	94.149	94.641	0					58	15	5	0	0	0	1.0366	2	39397	39397;39496		1.2148	0.35046	1	20723000	+		27818	9999	13757	13814	31957;31958	31957					0.13458234973427352
RAQLVKMFAG	10	Unmodified	_RAQLVKMFAG_					0	0	0			REV__ENST00000572638.1_1_17:44625595-44632942:+|nuORF	REV__ENST00000572638.1_1_17:44625595-44632942:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2151061892509	3	374.214704	1119.62228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.808	1	74.618	74.118	75.118	1.8101								0	0	0	0.6624	1	30545	30545		0.13989	0.056541	1		+		27819	11189	13758	13815	31959	31959					0.06725771107767287
RARALAGQ	8	Unmodified	_RARALAGQ_					0	0	0			REV__nc|ENSG00000118515|O00141-3|SGK1	REV__nc|ENSG00000118515|O00141-3|SGK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7514831423759	2	421.751393	841.488233	1.5474	0.00065261	-0.62271	-0.00026263	0.92466	0.00038998	421.75102016023567	70.474	0.5493	72.312	72.041	72.591	1.8378					41	17	3	0	0	0	0.89178	1	29613	29613		0.69038	0	1	10593000	+		27820	14415	13759	13816	31960	31960					0.06114873397223164
RARALELE	8	Unmodified	_RARALELE_					0	0	0		ENSG00000140743|ENST00000268383|CDR2	ENSG00000140743|ENST00000268383|CDR2	ENSG00000140743|ENST00000268383|CDR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2783080935478	2	479.277441	956.540328	2.692	0.0012902	-0.8179	-0.000392	1.8741	0.00089823	479.27700754469305	80.254	0.49853	80.545	80.279	80.778	0.29056					41	15	3	0	0	0	0.89178	1	33581	33581		0.69038	0	1	5858200			27821	2933	13760	13817	31961	31961					0.06031992020302823
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2504150271416	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.233	1	38.233	37.733	38.733	0								0	0	0	0.63775	1	16026	16026		1.1098	0.14748	1				27822	2699	13761	13818	31962	31962					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2499877810478	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.552	1	73.552	73.052	74.052	0								0	0	0	0.63775	1	30626	30626		1.1098	0.14748	1				27823	2699	13761	13818	31963	31963					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2500793337822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.431	1	37.736	37.236	38.236	0.30497								0	0	0	0.63775	1	15743	15743		1.1098	0.33322	1				27824	2699	13761	13818	31964	31964					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2522155642509	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.425	1	60.753	60.253	61.253	0.32809								0	0	0	0.63775	1	25321	25321		1.0136	0.051299	1				27825	2699	13761	13818	31965	31965					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2513610720634	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.845	1	66.169	65.669	66.669	0.32449								0	0	0	0.63775	1	27569	27569		1.1098	0.14748	1				27826	2699	13761	13818	31966	31966					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2512695193291	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.2	1	42.526	42.026	43.026	1.3254								0	0	0	0.63775	1	17277	17277		1.1098	0.038292	1				27827	2699	13761	13818	31967	31967					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2511169314384	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.925	1	48.307	47.807	48.807	1.3825								0	0	0	0.63775	1	19652	19652		1.1098	0.33322	1				27828	2699	13761	13818	31968	31968					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510558962822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.402	1	44.323	43.823	44.823	1.9211								0	0	0	0.63775	1	17769	17769		1.1098	0.33322	1				27829	2699	13761	13818	31969	31969					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2514526247978	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.513	1	46.473	45.973	46.973	1.9596								0	0	0	0.63775	1	18657	18657		1.1098	0.14748	1				27830	2699	13761	13818	31970	31970					0.14134698402381218
RARALVLPSRG	11	Unmodified	_RARALVLPSRG_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2487670779228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.619	1	48.589	48.089	49.089	1.9703								0	0	0	0.63775	1	19529	19529		2.2527	1.2905	1				27831	2699	13761	13818	31971	31971					0.14134698402381218
RARLATGP	8	Unmodified	_RARLATGP_					0	0	0		chr8:143581095-143581286|158|62.77|0.14|8.79|-|1|None,EEF1D|1	chr8:143581095-143581286|158|62.77|0.14|8.79|-|1|None,EEF1D|1	chr8:143581095-143581286|158|62.77|0.14|8.79|-|1|None,EEF1D|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	421.2545043826103	2	421.253769	840.492984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.942	1	65.269	64.769	65.769	0.32689								0	0	0	1.0178	1	27200	27200		4.3292	0	1				27832	288	13762	13819	31972	31972					0.06635757539993392
RARPISSPAAL	11	Unmodified	_RARPISSPAAL_					0	0	0		ENST00000433510.2_1_17:46724275-46724353:-|nuORF	ENST00000433510.2_1_17:46724275-46724353:-|nuORF	ENST00000433510.2_1_17:46724275-46724353:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	380.2285949587822	3	380.22789	1137.66184	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.42	1	78.42	77.92	78.92	0								0	0	0	0.63775	1	32645	32645		1.0136	0.1492	1				27833	6514	13763	13820	31973	31973					0.09851614382841944
RARQRRQWLFR	11	Unmodified	_RARQRRQWLFR_					0	0	0			REV__sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	REV__sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_W632_02	4	524.9731323122978	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.18	1	46.123	45.623	46.623	1.9438								0	0	0	0.63775	1	18521	18521		0.40827	0.31342	1		+		27834	14657	13764	13821	31974	31974					0.13910448493584227
RARRPLQRVR	10	Unmodified	_RARRPLQRVR_					0	0	0			REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.6154662966728	3	436.612961	1306.81705	3.3479	0.0014617	1.8025	0.00078701	5.1505	0.0022488	436.61407078651604	105.89	0.15476	106.04	105.94	106.1	0.15859					20	7	4	0	0	0	0.89803	1	45204	45204		0.13989	0.017027	1	59192000	+		27835	12793	13765	13822	31975	31975					0.17591703027756012
RARRPLQRVR	10	Unmodified	_RARRPLQRVR_					0	0	0			REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	436.612961	1306.81705	0.73493	0.00032088	4.9242	0.00215	5.6591	0.0024709	436.6158162896733	105.94	0.11266	105.94	105.88	105.99	0	-0.041863	0.0036998	NaN	0.13989	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11961000	+		27836	12793	13765	13822							0.17591703027756012
RARRPLQRVR	10	Unmodified	_RARRPLQRVR_					0	0	0			REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	436.612961	1306.81705	3.1742	0.0013859	4.336	0.0018932	7.5102	0.0032791	436.6149401225084	105.9	0.10242	105.95	105.9	106	0.05455	-0.036465	0.0029294	NaN	0.13989	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12899000	+		27837	12793	13765	13822							0.17591703027756012
RARRPLQRVR	10	Unmodified	_RARRPLQRVR_					0	0	0			REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	REV__ENST00000391814.5_1_19:51220030-51220207:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	436.612961	1306.81705	3.3479	0.0014617	1.8025	0.00078701	5.1505	0.0022488	436.61407078651604	105.89	0.15476	106.04	105.94	106.1	0.15859	0.058055	-0.00038913	NaN	0.13989	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59192000	+		27838	12793	13765	13822							0.17591703027756012
RARRPRAWLT	10	Unmodified	_RARRPRAWLT_					0	0	0			REV__ENST00000535220.1_1_12:6933100-6934099:+|nuORF	REV__ENST00000535220.1_1_12:6933100-6934099:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8852416872978	2	641.883804	1281.75306	2.0424	0.001311	-1.7581	-0.0011285	0.28425	0.00018245	641.8826590024304	79.226	1.0114	79.226	78.907	79.918	0					92	32	3	0	0	0	0.88022	1	32889	32889		3.5965	0.8613	1	2934400	+		27839	11951	13766	13823	31976	31976					0.1234492287080684
RARVGKWQW	9	Unmodified	_RARVGKWQW_					0	0	0			REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2231933474541	3	396.224591	1185.65194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.576	1	85.576	85.076	86.076	0								0	0	0	0.42693	1	35655	35655		1.1933	0.23107	1		+		27840	12640	13767	13824	31977	31977					0.06654471168144482
RARVGKWQW	9	Unmodified	_RARVGKWQW_					0	0	0			REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2232543826103	3	396.224591	1185.65194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.112	1	86.112	85.612	86.612	0								0	0	0	0.42693	1	35878	35878		1.1933	0.083588	1		+		27841	12640	13767	13824	31978	31978					0.06654471168144482
RARVGKWQW	9	Unmodified	_RARVGKWQW_					0	0	0			REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2240173220634	3	396.224591	1185.65194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.758	1	88.758	88.258	89.258	0								0	0	0	0.42693	1	37108	37108		1.0715	0.057888	1		+		27842	12640	13767	13824	31979	31979					0.06654471168144482
RARVGKWQW	9	Unmodified	_RARVGKWQW_					0	0	0			REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	REV__ENST00000368494.3_1_6:117996685-117996769:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2238952517509	3	396.224591	1185.65194	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.872	1	90.089	89.589	90.589	0.21641								0	0	0	0.42693	1	37662	37662		1.1933	0.23107	1		+		27843	12640	13767	13824	31980	31980					0.06654471168144482
RASAHPSVCL	10	Unmodified	_RASAHPSVCL_					0	0	0			REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1040.531909167767	1	1040.53057	1039.5233	4.0979	0.004264	4.3609	0.0045376	8.4587	0.0088016	1040.532212250679	90.208	0.22575	91.228	91.147	91.372	1.0199					10	6	2	0	0	0	0.82659	1	38061	38061		9.3831	2.0939	1	1592300	+		27844	14509	13768	13825	31981	31981					0.005117481428669635
RASCCACC	8	Unmodified	_RASCCACC_					0	0	0		ENST00000484875.5_1_20:46386013-46414798:-|nuORF;ENST00000437955.1_1_20:46386013-46414096:-|nuORF;ENST00000359930.8_1_20:46386013-46414675:-|nuORF	ENST00000484875.5_1_20:46386013-46414798:-|nuORF	ENST00000484875.5_1_20:46386013-46414798:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	408.0749694705009	2	408.634611	815.25467	0.57403	0.00023457	0.40736	0.00016646	0.98139	0.00040103	408.6347120921918	56.324	1.3883	56.324	55.682	57.07	0					63	47	2	0	0	0	2.3239	1	23246	23246		0	0	1	2443000			27845	6022	13769	13826	31982	31982					-0.16034753692122194
RASIARPAA	9	Unmodified	_RASIARPAA_					0	0	0			REV__ENST00000572151.1_1_17:78328611-78388856:-|nuORF	REV__ENST00000572151.1_1_17:78328611-78388856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.7732421755791	2	456.772326	911.530098	1.7737	0.00081017	0.084953	3.8804E-05	1.8586	0.00084897	456.7723096256867	72.126	0.47136	72.126	71.86	72.332	0					42	14	4	0	0	0	0.80152	1	29988	29988		3.2813	3.2813	1	15183000	+		27846	13969	13770	13827	31983	31983					0.07079429085740685
RASLLLKTY	9	Unmodified	_RASLLLKTY_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1904174685478	2	532.826766	1063.63898	0.90118	0.00048017	-1.5597	-0.00083104	-0.6585	-0.00035087	532.8258486814271	25.593	0.21392	27.309	27.245	27.459	1.7167					11	6	2	0	0	0	0.11492	1	10725	10725		13.042	2.9685	1	759660			27847	4655	13771	13828	31984	31984					0.10970595265393968
RASVATTSF	9	Unmodified	_RASVATTSF_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2475158572197	2	470.248349	938.482145	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.14	1	86.736	86.236	87.236	1.5962								0	0	0	0.42693	1	35744	35744		1.4819	0.68827	1		+		27848	9995	13772	13829	31985	31985					0.010443103750503724
RATFAGLYS	9	Unmodified	_RATFAGLYS_					0	0	0		nc|ENSG00000100983|P48637-2|GSS;ENSG00000100983|ENST00000651619|GSS	nc|ENSG00000100983|P48637-2|GSS	nc|ENSG00000100983|P48637-2|GSS	MSMS	GG20161007_CRH_Patient100_W632_01	3	329.1751281619072	3	329.174903	984.50288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.62	103.12	104.12	0.16445								0	0	0	0.42693	1	43617	43617		0.86438	0.40604	1				27849	1314	13773	13830	31986	31986					0.010009007547068904
RATRPFFF	8	Unmodified	_RATRPFFF_					0	0	0			REV__ENST00000469704.1_1_20:17934783-17949290:-|nuORF	REV__ENST00000469704.1_1_20:17934783-17949290:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2858764529228	2	521.285069	1040.55558	2.5299	0.0013188	-0.68249	-0.00035577	1.8474	0.00096301	521.2848714301359	71.936	0.79951	73.76	73.412	74.212	1.824					71	25	4	0	0	0	0.87106	1	30098	30098		14.582	1.5392	1	31595000	+		27850	13270	13774	13831	31987	31987					0.036929036081801314
RATRRVEPLP	10	Unmodified	_RATRRVEPLP_					0	0	0			REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	REV__ENST00000529902.2_1_14:50466771-50470439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8575317263603	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.89803	1	32251	32251		1.6526	0	1	11246000	+		27851	13694	13775	13832	31988	31988					0.11018705648461946
RATSRQLRRL	10	Unmodified	_RATSRQLRRL_					0	0	0			REV__ENST00000372771.4_1_1:40668212-40688273:+|nuORF	REV__ENST00000372771.4_1_1:40668212-40688273:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3163940310478	3	419.593455	1255.75853	0.98894	0.00041495	-1.4101	-0.00059166	-0.42115	-0.00017671	419.5927180434637	81.117	0.61507	81.117	80.853	81.469	0					30	19	2	0	0	0	0.12557	1	33787	33787		0.10794	0	1	700780	+		27852	12685	13776	13833	31989	31989					0.1408860166266095
RATVPVRN	8	Unmodified	_RATVPVRN_					0	0	0			REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.7730285525322	2	456.772326	911.530098	1.7737	0.00081017	0.084953	3.8804E-05	1.8586	0.00084897	456.7723096256867	72.126	0.47136	72.126	71.86	72.332	0					42	14	4	0	0	0	0.8873	2	30035	30035;30074		4.3292	2.0265	1	15183000	+		27853	12666	13777	13834	31990;31991	31990					0.07079429085752054
RATVPVRN	8	Unmodified	_RATVPVRN_					0	0	0			REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	REV__ENST00000370902.7_1_10:99202997-99205519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.7733337283134	2	456.772326	911.530098	2.3782	0.0010863	0.17012	7.7705E-05	2.5483	0.001164	456.77228369656086	71.907	0.60027	72.232	71.882	72.483	0.32494					51	18	4	0	0	0	0.89051	1	30095	30095		2.3027	0	1	12516000	+		27854	12666	13777	13834	31992	31992					0.07079429085752054
RAVKFQRA	8	Unmodified	_RAVKFQRA_					0	0	0		ENSG00000114391|ENST00000394077|RPL24	ENSG00000114391|ENST00000394077|RPL24	ENSG00000114391|ENST00000394077|RPL24	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2970153689384	2	488.295968	974.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.312	1	17.352	16.852	17.852	1.0392								0	0	0	1.0178	1	6774	6774		2.3027	0	1				27855	1862	13778	13835	31993	31993					0.08907708356753119
RAVLHAAP	8	Unmodified	_RAVLHAAP_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	834.4933959841728	1	834.494447	833.487171	2.7754	0.002316	-3.836	-0.0032011	-1.0607	-0.00088511	834.4902904134623	106.72	0.082253	106.77	106.72	106.81	0.05455					8	3	3	0	0	0	0.89008	1	45537	45537		0.69038	0	1	11143000	+		27856	12684	13779	13836	31994	31994					0.06376659028319409
RAVLHAAP	8	Unmodified	_RAVLHAAP_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	834.494447	833.487171	1.2325	0.0010285	-0.98216	-0.00081961	0.25036	0.00020892	834.4924651771095	106.75	0.10024	106.75	106.7	106.8	0	-0.044724	0.001424	NaN	0.69038	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19695000	+		27857	12684	13779	13836							0.06376659028319409
RAVLHAAP	8	Unmodified	_RAVLHAAP_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	834.494447	833.487171	2.7754	0.002316	-3.836	-0.0032011	-1.0607	-0.00088511	834.4902904134623	106.72	0.082253	106.77	106.72	106.81	0.05455	-0.025049	-0.00095748	NaN	0.69038	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11143000	+		27858	12684	13779	13836							0.06376659028319409
RAVLHAAP	8	Unmodified	_RAVLHAAP_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	834.494447	833.487171	2.8872	0.0024093	-2.4893	-0.0020773	0.39784	0.00033199	834.490884111008	106.7	0.10553	106.86	106.77	106.88	0.15781	0.058821	0.0001663	NaN	0.69038	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4446000	+		27859	12684	13779	13836							0.06376659028319409
RAVLHAAP	8	Unmodified	_RAVLHAAP_					0	0	0			REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	REV__ENST00000372728.3_1_X:102318578-102319143:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	834.494447	833.487171	3.012	0.0025135	-5.866	-0.0048952	-2.854	-0.0023816	834.4888286704955	106.65	0.078278	106.81	106.76	106.84	0.16174	0.010952	-0.0026515	NaN	0.69038	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9005700	+		27860	12684	13779	13836							0.06376659028319409
RAVVLALVLLL	11	Unmodified	_RAVVLALVLLL_					0	0	0		ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	ENSG00000162591|ENST00000356575|MEGF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	590.4131957888603	2	590.413009	1178.81146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.706	1	88.706	88.206	89.206	0								0	0	0	0.63775	1	37085	37085		0.30703	0	1				27861	3627	13780	13837	31995	31995					0.22921166672722393
RAVVREGAVAW	11	Unmodified	_RAVVREGAVAW_					0	0	0		ENST00000360264.7_1_7:101900028-101900100:+|nuORF	ENST00000360264.7_1_7:101900028-101900100:+|nuORF	ENST00000360264.7_1_7:101900028-101900100:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1783630251884	3	405.231523	1212.67274	1.5152	0.00061401	1.9936	0.00080788	3.5088	0.0014219	405.2322246317076	45.333	0.2181	47.292	47.146	47.364	1.9596					10	6	2	0	0	0	0.14606	1	18971	18971		0.32927	0.18938	1	190840			27862	6026	13781	13838	31996	31996					0.07491016757148827
RAWRPLRRGP	10	Unmodified	_RAWRPLRRGP_					0	0	0		ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	ENST00000587013.5_1_19:38882915-38886805:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2555724978447	3	422.254773	1263.74249	1.0196	0.00043053	-0.14948	-6.3119E-05	0.87011	0.00036741	422.2550698892577	93.304	0.8219	93.304	92.984	93.805	0					57	25	3	0	0	0	0.8974	1	39048	39048		1.7423	0	1	1816300			27863	7460	13782	13839	31997	31997					0.12116940216401417
RAWRRGRST	9	Unmodified	_RAWRRGRST_					0	0	0			REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3186523318291	2	573.32358	1144.63261	2.6374	0.0015121	-0.64	-0.00036693	1.9974	0.0011452	573.3237253545262	101.25	0.15247	101.31	101.24	101.39	0.067009					9	4	3	0	0	0	0.77526	1	42385	42385		4.3292	0.38484	1	5491600	+		27864	13846	13783	13840	31998	31998					0.06607514877214271
RAWRRGRST	9	Unmodified	_RAWRRGRST_					0	0	0			REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	573.32358	1144.63261	1.0437	0.00059835	-6.1028	-0.0034989	-5.0591	-0.0029005	573.3200450539326	101.27	0.13785	101.27	101.18	101.32	0	-0.021024	-0.0025289	NaN	4.3292	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4917300	+		27865	13846	13783	13840							0.06607514877214271
RAWRRGRST	9	Unmodified	_RAWRRGRST_					0	0	0			REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	REV__ENST00000553964.5_1_14:90864321-90864954:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	573.32358	1144.63261	2.6374	0.0015121	-0.64	-0.00036693	1.9974	0.0011452	573.3237253545262	101.25	0.15247	101.31	101.24	101.39	0.067009	0.021024	0.0037349	NaN	4.3292	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5491600	+		27866	13846	13783	13840							0.06607514877214271
RCARLSQFLSF	11	Unmodified	_RCARLSQFLSF_					0	0	0			REV__ENST00000237724.9_1_1:220369588-220445709:-|nuORF	REV__ENST00000237724.9_1_1:220369588-220445709:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	664.3507568240166	2	664.350614	1326.68668	3.48	0.0023119	-2.6536	-0.0017629	0.82641	0.00054902	664.3488342521351	97.685	0.20941	97.912	97.801	98.011	0.22776					12	6	3	0	0	0	0.32985	1	41113	41113		29.841	0	1	9524400	+		27867	9525	13784	13841	31999	31999					0.03639926193886822
RCCCCCWAM	9	Unmodified	_RCCCCCWAM_					0	0	0		ENST00000379757.8_1_6:7899909-7910954:-|nuORF	ENST00000379757.8_1_6:7899909-7910954:-|nuORF	ENST00000379757.8_1_6:7899909-7910954:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.1131774783134	3	360.112113	1077.31451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.68	1	118.92	118.42	119.42	0.23128								0	0	0	0.42693	1	51297	51297		0.26902	0	1				27868	6217	13785	13842	32000	32000					-0.22105522344759265
RCKRKRLK	8	Unmodified	_RCKRKRLK_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.3540527224541	2	544.353294	1086.69204	0.98428	0.00053579	-0.44267	-0.00024097	0.5416	0.00029482	544.3530147533766	106.09	0.16379	106.09	105.99	106.15	0					24	7	5	0	0	0	0.89178	1	45164	45164		0.69038	0	1	260900000	+		27869	11176	13786	13843	32001	32001					0.15215694567041282
RCKRLLRKP	9	Unmodified	_RCKRLLRKP_					0	0	0			REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3751708865166	2	585.374227	1168.7339	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.695	1	22.27	21.77	22.77	1.5748								0	0	0	0.42693	1	8613	8613		0.52476	0.066424	1		+		27870	14154	13787	13844	32002	32002					0.1562825025557686
RCLPVRRSGP	10	Unmodified	_RCLPVRRSGP_					0	0	0			REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.8859435915947	3	380.88547	1139.63458	1.6291	0.00062049	1.4514	0.0005528	3.0804	0.0011733	380.88601018686467	52.064	0.94672	52.389	52.006	52.953	0.32554					99	30	4	0	0	0	0.85217	2	21776	21776;21827		6.6235	2.0946	1	14753000	+		27871	13619	13788	13845	32003;32004	32003					0.07034807570812518
RCLPVRRSGP	10	Unmodified	_RCLPVRRSGP_					0	0	0			REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8866760134697	3	380.88547	1139.63458	0.27359	0.00010421	1.2292	0.00046817	1.5028	0.00057238	380.88594184551096	50.792	0.97278	52.186	51.801	52.773	1.3938					98	31	4	0	0	0	0.87271	1	21212	21212		4.4062	1.671	1	18085000	+		27872	13619	13788	13845	32005	32005					0.07034807570812518
RCLPVRRSGP	10	Unmodified	_RCLPVRRSGP_					0	0	0			REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	REV__ENST00000519715.1_1_5:140012405-140013200:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8865234255791	3	380.88547	1139.63458	0.9506	0.00036207	0.35808	0.00013639	1.3087	0.00049846	380.8856156694533	50.441	0.91043	52.416	51.786	52.697	1.9753					90	29	4	0	0	0	0.86984	2	20992	20951;20992		4.7159	4.4062	1	14245000	+		27873	13619	13788	13845	32006;32007	32007					0.07034807570812518
RCLRRLLHL	9	Unmodified	_RCLRRLLHL_					0	0	0		ENST00000303545.3_1_8:125487129-125487267:+|nuORF	ENST00000303545.3_1_8:125487129-125487267:+|nuORF	ENST00000303545.3_1_8:125487129-125487267:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	394.2078430056572	3	393.91336	1178.71825	1.6544	0.00065168	-4.3449	-0.0017115	-2.6906	-0.0010598	394.2445980945801	67.757	0.61903	69.627	69.208	69.827	1.87					26	19	2	0	0	0	0.11938	1	28306	28306		0.26902	0.1097	1	444730			27874	5768	13789	13846	32008	32008					0.13603963738523817
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	758.4359008669853	2	757.933503	1513.85245	2.5666	0.0019453	-1.8403	-0.0013948	0.72627	0.00055047	757.9323700264642	86.917	0.89062	87.161	86.606	87.496	0.24387					229	35	7	0	0	0	1.0395	2	36287	36287;36529		0.30703	0.30703	1	600830000	+		27875	8220	13790	13847	32009;32010	32009					0.11607997493297262
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	758.4359008669853	2	757.933503	1513.85245	2.5666	0.0019453	-1.8403	-0.0013948	0.72627	0.00055047	757.9323700264642	86.917	0.89062	87.161	86.606	87.496	0.24387					229	35	7	0	0	0	0.14606	1	36287	36287		0.30703	0.30703	1	600830000	+		27876	8220	13790	13847	32011	32011					0.11607997493297262
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	758.4369994997978	2	757.933503	1513.85245	2.3035	0.0017459	-0.62834	-0.00047624	1.6752	0.0012697	758.4352349575831	85.658	1.3702	86.785	86.27	87.641	1.1265					349	55	7	0	0	0	1.0395	1	35965	35965		0.30703	0.30703	1	552680000	+		27877	8220	13790	13847	32012	32012					0.11607997493297262
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.9367553591728	2	757.933503	1513.85245	3.0378	0.0023024	1.5346	0.0011632	4.5724	0.0034656	757.9346334011002	86.728	0.56137	87.82	87.528	88.09	1.0918					122	20	8	0	0	0	1.0395	1	36551	36551		0.30703	0.03801	1	36145000	+		27878	8220	13790	13847	32013	32013					0.11607997493297262
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	758.4365112185478	2	757.933503	1513.85245	2.8271	0.0021428	-1.525	-0.0011558	1.3022	0.00098694	758.4345339218589	85.186	1.3382	86.782	86.401	87.739	1.5962					335	54	7	0	0	0	1.0395	4	35666	35666;35794;35857;35939		0.30703	0.30703	1	469330000	+		27879	8220	13790	13847	32014;32015;32016;32017	32014					0.11607997493297262
RCLRRRRAELW	11	Unmodified	_RCLRRRRAELW_					0	0	0			REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	REV__chr1:228140363-228141633|424|28.54|0.83|5.1|+|ENST00000435153|GUK1,GUK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.9376098513603	2	757.933503	1513.85245	3.659	0.0027732	0.47888	0.00036296	4.1378	0.0031362	758.4361656052151	86.373	0.53951	87.92	87.663	88.203	1.547					120	19	8	0	0	0	1.0395	1	36440	36440		0.30703	0	1	43001000	+		27880	8220	13790	13847	32018	32018					0.11607997493297262
RCNCCCCPCCL	11	Unmodified	_RCNCCCCPCCL_					0	0	0		ENSG00000163746|ENST00000696113|PLSCR2;nc|ENSG00000163746|Q9NRY7-3|PLSCR2;nc|ENSG00000163746|Q9NRY7|PLSCR2	ENSG00000163746|ENST00000696113|PLSCR2	ENSG00000163746|ENST00000696113|PLSCR2	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.6849243044853	2	610.685138	1219.35572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.457	1	53.432	52.932	53.932	1.9753								0	0	0	0.63775	1	21564	21564		0.35063	0	1				27881	3720	13791	13848	32019	32019					-0.24518129367584152
RCQRFDFRRIT	11	Unmodified	_RCQRFDFRRIT_					0	0	0		tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	749.3962890505791	2	749.396419	1496.77828	1.3561	0.0010163	-4.0378	-0.0030259	-2.6817	-0.0020096	749.3951513260106	108.52	0.18224	108.52	108.4	108.58	0					27	7	4	0	0	0	1.0395	1	46742	46742		0.30703	0.03801	1	126300000			27882	16154	13792	13849	32020	32020					0.04976609611071581
RCQRFDFRRIT	11	Unmodified	_RCQRFDFRRIT_					0	0	0		tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	tr|A0A553SHJ7|A0A553SHJ7_NIACIDNApolymeraseIIIsubunitgamma/tauOS=NialliacirculansOX=1397GN=dnaXPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	749.396419	1496.77828	2.7268	0.0020435	-5.9401	-0.0044515	-3.2132	-0.002408	749.394639834403	108.48	0.17579	108.53	108.42	108.6	0.050644	0.004877	-0.0011634	NaN	0.30703	61	10	7	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120440000			27883	16154	13792	13849							0.04976609611071581
RCRFLLFV	8	Unmodified	_RCRFLLFV_					0	0	0		ENSG00000101181|ENST00000370823|MTG2;nc|ENSG00000101181|Q9H4K7-2|MTG2	ENSG00000101181|ENST00000370823|MTG2	ENSG00000101181|ENST00000370823|MTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3055908083916	2	527.304947	1052.59534	2.4611	0.0012977	-2.1312	-0.0011238	0.32984	0.00017393	527.3037696357269	83.984	0.4305	83.984	83.721	84.151	0					32	13	3	0	0	0	0.89008	1	35031	35031		2.5775	0	1	8047200			27884	1326	13793	13850	32021	32021					0.07114707287246347
RCRKGRLGP	9	Unmodified	_RCRKGRLGP_					0	0	0		ENST00000269033.7_1_17:27955686-27956034:-|nuORF	ENST00000269033.7_1_17:27955686-27956034:-|nuORF	ENST00000269033.7_1_17:27955686-27956034:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2066223025322	3	348.206543	1041.5978	0.8385	0.00029197	0.15469	5.3863E-05	0.99319	0.00034584	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.77876	1	13513	13513		4.1895	0.59301	1	7322900			27885	5666	13794	13851	32022	32022					0.0786655574490851
RCRKRWLRPIF	11	Unmodified	_RCRKRWLRPIF_					0	0	0		ENST00000432193.5_1_7:86970965-86974694:-|nuORF;ENST00000359941.9_1_7:86974424-86974694:-|nuORF	ENST00000432193.5_1_7:86970965-86974694:-|nuORF	ENST00000432193.5_1_7:86970965-86974694:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.9698364138603	3	510.969868	1529.88777	3.9835	0.0020354	-2.5051	-0.00128	1.4784	0.00075542	510.96879671076766	90.888	0.41257	92.254	91.961	92.374	1.366					15	12	2	0	0	0	1.0388	1	38185	38185		0.50596	0	1	524740			27886	6023	13795	13852	32023	32023					0.14402660021073643
RCRLSLVLRPP	11	Unmodified	_RCRLSLVLRPP_					0	0	0		ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2024413943291	4	328.202588	1308.78124	-0.95799	-0.00031442	-0.27536	-9.0373E-05	-1.2334	-0.00040479	328.20226472412736	35.606	0.401	36.881	36.661	37.062	1.2746					91	32	3	0	0	0	1.0032	1	15001	15001		3.5927	0.96144	1	12916000			27887	5184	13796	13853	32024	32024					0.13920484735899663
RCRLSLVLRPP	11	Unmodified	_RCRLSLVLRPP_					0	0	0		ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2021057009697	4	328.202588	1308.78124	-0.66977	-0.00021982	0.14717	4.8302E-05	-0.5226	-0.00017152	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	1.0254	1	15775	15775		2.2527	0.51045	1	30589000			27888	5184	13796	13853	32025	32025					0.13920484735899663
RCRLSLVLRPP	11	Unmodified	_RCRLSLVLRPP_					0	0	0		ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	ENSG00000205502|ENST00000380392|C2CD4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2014953494072	4	328.202588	1308.78124	0.20818	6.8325E-05	-1.88	-0.00061701	-1.6718	-0.00054869	328.20160328390904	35.134	0.40782	36.951	36.752	37.159	1.8176					91	35	3	0	0	0	0.97115	1	14775	14775		5.5233	1.6774	1	11663000			27889	5184	13796	13853	32026	32026					0.13920484735899663
RCRRMVVV	8	Unmodified	_RCRRMVVV_					0	0	0		ENST00000481122.5_1_3:38180729-38182774:+|nuORF;nc|ENSG00000172936|Q99836-2|MYD88;nc|ENSG00000172936|Q99836-5|MYD88;ENSG00000172936|ENST00000650905|MYD88	ENST00000481122.5_1_3:38180729-38182774:+|nuORF	ENST00000481122.5_1_3:38180729-38182774:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1962463259697	3	340.196879	1017.56881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.822	1	42.822	42.322	43.322	0								0	0	0	1.0178	1	17922	17922		0.45834	0	1				27890	4261	13797	13854	32027	32027					0.06072695124271377
RCRRRRWSA	9	Unmodified	_RCRRRRWSA_					0	0	0		PODXL|p.S519Lfs*27|1|0.27|ENSG00000128567|chr7:131504434-131504434|G/-|frameshift_variant	PODXL|p.S519Lfs*27|1|0.27|ENSG00000128567|chr7:131504434-131504434|G/-|frameshift_variant	PODXL|p.S519Lfs*27|1|0.27|ENSG00000128567|chr7:131504434-131504434|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	416.2309142947197	3	416.231863	1245.67376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.645	1	27.362	26.862	27.862	1.7167								0	0	0	0.42693	1	10723	10723		1.0715	0.3738	1				27891	8059	13798	13855	32028	32028					0.060749526450535996
RCYMKPKF	8	Unmodified	_RCYMKPKF_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.1859924197197	3	358.185869	1071.53578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.779	1	27.779	27.279	28.279	0								0	0	0	1.0178	1	11620	11620		0.40072	0.050084	1		+		27892	10768	13799	13856	32029	32029					0.0028706828154554387
RDCPEWNKL	9	Unmodified	_RDCPEWNKL_					0	0	0			REV__ENSG00000101966|ENST00000371199|XIAP	REV__ENSG00000101966|ENST00000371199|XIAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	580.7793456912041	2	580.77949	1159.54443	1.7882	0.0010385	0.048778	2.8329E-05	1.8369	0.0010669	580.7794580034322	77.375	0.24928	77.375	77.252	77.502	0					11	7	2	0	0	0	0.77526	1	32217	32217		4.3292	0.38484	1	350440	+		27893	9051	13800	13857	32030	32030					-0.02896286548275384
RDDQEDVP	8	Unmodified	_RDDQEDVP_					0	0	0		ENST00000579152.1_1_17:17398683-17399571:-|nuORF	ENST00000579152.1_1_17:17398683-17399571:-|nuORF	ENST00000579152.1_1_17:17398683-17399571:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	486.7861816287041	2	487.214703	972.414853	3.2581	0.0015874	-1.054	-0.00051353	2.2041	0.0010739	487.214032660027	91.829	0.38448	93.156	92.956	93.341	1.3269					18	11	2	0	0	0	2.3239	1	38666	38666		9.3474	0	1	618510			27894	7427	13801	13858	32031	32031					-0.07245764626566142
RDFLGYCCQ	9	Unmodified	_RDFLGYCCQ_					0	0	0		ENST00000361362.6_1_5:178322903-178343648:+|nuORF;ENST00000520660.5_1_5:178322903-178343648:+|nuORF	ENST00000361362.6_1_5:178322903-178343648:+|nuORF	ENST00000361362.6_1_5:178322903-178343648:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.7336303591728	2	552.733694	1103.45284	2.5356	0.0014015	-2.5954	-0.0014346	-0.059791	-3.3048E-05	552.7317502466435	85.961	0.30426	86.213	86.037	86.341	0.25227					23	9	3	0	0	0	0.77526	1	35915	35915		4.3292	0.73274	1	2094100			27895	6038	13802	13859	32032	32032					-0.09475293237119331
RDHMEDRFE	9	Unmodified	_RDHMEDRFE_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-4|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.1815063357353	3	412.1805	1233.51967	-0.71422	-0.00029439	1.0773	0.00044403	0.36304	0.00014964	412.18124089952715	12.143	0.24899	12.143	12.034	12.283	0					27	7	4	0	0	0	0.22861	1	5007	5007		29.841	1.607	1	7605600			27896	3700	13803	13860	32033	32033					-0.0877496642162896
RDHMEDRFE	9	Unmodified	_RDHMEDRFE_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-4|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	412.1805	1233.51967	0.35167	0.00014495	0.081446	3.3571E-05	0.43311	0.00017852	412.18099654817354	11.947	0.28442	12.037	11.96	12.244	0.089381	-0.079296	-0.00088603	NaN	29.841	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1381700			27897	3700	13803	13860							-0.0877496642162896
RDHMEDRFE	9	Unmodified	_RDHMEDRFE_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-4|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	412.1805	1233.51967	-0.55728	-0.0002297	1.7723	0.00073052	1.215	0.00050082	412.1811230507689	11.516	0.12696	12.185	12.107	12.234	0.66934	0.068752	0.0012048	NaN	29.841	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	758660			27898	3700	13803	13860							-0.0877496642162896
RDHMEDRFE	9	Unmodified	_RDHMEDRFE_					0	0	0		ENSG00000163590|ENST00000498165|PPM1L;nc|ENSG00000163590|Q5SGD2-4|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	ENSG00000163590|ENST00000498165|PPM1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	412.1805	1233.51967	-0.0036954	-1.5232E-06	-0.13053	-5.3801E-05	-0.13422	-5.5324E-05	412.5146071089865	11.338	0.15653	12.1	12.037	12.193	0.76165	-0.016108	-0.0011481	NaN	29.841	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	505120			27899	3700	13803	13860							-0.0877496642162896
RDKGKGKKRP	10	Unmodified	_RDKGKGKKRP_					0	0	0		nc|ENSG00000080503|P51531-2|SMARCA2;ENSG00000080503|ENST00000349721|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	nc|ENSG00000080503|P51531-2|SMARCA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3660766482353	2	585.364913	1168.71527	2.4564	0.0014379	-0.77437	-0.00045329	1.682	0.0009846	585.3645768603548	85.525	0.77782	85.777	85.259	86.037	0.25227					51	24	3	0	0	0	0.89803	1	35807	35807		0.40072	0	1	1261800			27900	1002	13804	13861	32034	32034					0.1376641188535359
RDLKTAIE	8	Unmodified	_RDLKTAIE_					0	0	0		ENSG00000205221|ENST00000379242|VIT;nc|ENSG00000205221|Q6UXI7-2|VIT;nc|ENSG00000205221|Q6UXI7-5|VIT;nc|ENSG00000205221|Q6UXI7|VIT	ENSG00000205221|ENST00000379242|VIT	ENSG00000205221|ENST00000379242|VIT	MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2728454470634	2	473.271824	944.529095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.2	1	104.26	103.76	104.76	0.059502								0	0	0	1.0178	1	43898	43898		2.3027	0	1				27901	5175	13805	13862	32035	32035					0.05461169926161347
RDLLLTSL	8	Unmodified	_RDLLLTSL_					0	0	0			REV__nc|ENSG00000138399|Q53R41-2|FASTKD1	REV__nc|ENSG00000138399|Q53R41-2|FASTKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7858764529228	2	465.784567	929.554582	3.5561	0.0016564	-0.19187	-8.937E-05	3.3642	0.001567	465.783757640185	104.47	0.093964	104.64	104.58	104.67	0.17309					13	4	4	0	0	0	0.89051	1	44214	44214		2.3027	0	1	20111000	+		27902	10063	13806	13863	32036	32036					0.08698644448600135
RDLNFHVF	8	Unmodified	_RDLNFHVF_					0	0	0		ENSG00000129515|ENST00000362031|SNX6;nc|ENSG00000129515|Q9UNH7-2|SNX6;ENST00000556162.5_1_14:35032330-35073396:-|nuORF	ENSG00000129515|ENST00000362031|SNX6	ENSG00000129515|ENST00000362031|SNX6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	350.2062866091728	3	349.850531	1046.52976	-1.332	-0.00046601	0.8229	0.00028789	-0.50914	-0.00017812	349.8524322595134	38.65	0.091244	38.65	38.62	38.711	0					5	3	2	0	0	0	2.3239	1	16208	16208		1.4819	0	1	310380			27903	2406	13807	13864	32037	32037					0.008360093659121048
RDNERTIRRLL	11	Unmodified	_RDNERTIRRLL_					0	0	0			REV__ENST00000517529.1_1_16:21916176-21922684:-|nuORF	REV__ENST00000517529.1_1_16:21916176-21922684:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7833740115166	3	481.283057	1440.82734	5.8178	0.0028	-0.58257	-0.00028038	5.2353	0.0025196	481.6175598914164	88.967	0.77485	90.023	89.723	90.498	1.0562					36	23	2	0	0	0	1.0388	1	37591	37591		0.50596	0	1	1354200	+		27904	13605	13808	13865	32038	32038					0.1245622117169205
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.9414855837822	3	489.939514	1466.79671	1.7268	0.00084602	1.9271	0.00094415	3.6538	0.0017902	489.94036894007627	55.894	0.51794	55.894	55.682	56.2	0					45	17	4	0	0	0	0.61014	3	23290	23244;23290;23349		20.871	8.6435	1	16134000	+		27905	8647	13809	13866	32039;32040;32041	32040					0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.9411804080009	3	489.939514	1466.79671	2.7723	0.0013583	1.2731	0.00062376	4.0455	0.001982	489.9401481925691	55.348	0.44153	55.669	55.485	55.926	0.32088					39	13	4	0	0	0	0.77014	2	23187	23136;23187		16.275	10.04	1	4045500	+		27906	8647	13809	13866	32042;32043	32043					0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2741577029228	3	489.939514	1466.79671	1.7013	0.00083354	2.6339	0.0012905	4.3352	0.002124	489.9408909469947	54.213	0.39138	55.617	55.38	55.771	1.4048					29	12	3	0	0	0	0.91757	2	22654	22654;22707		8.7518	5.1591	1	2424000	+		27907	8647	13809	13866	32044;32045	32044					0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.9420043826103	3	489.939514	1466.79671	1.0868	0.00053248	2.4806	0.0012153	3.5674	0.0017478	490.27523583882424	53.673	0.40624	55.642	55.503	55.909	1.9697					19	12	2	0	0	0	0.99899	1	22499	22499		3.8459	1.2147	1	2187900	+		27908	8647	13809	13866	32046	32046					0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	489.939514	1466.79671	1.7268	0.00084602	1.9271	0.00094415	3.6538	0.0017902	489.94036894007627	55.894	0.51794	55.894	55.682	56.2	0	0.18811	-0.00014819	NaN	20.871	45	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16134000	+		27909	8647	13809	13866							0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	489.939514	1466.79671	2.7723	0.0013583	1.2731	0.00062376	4.0455	0.001982	489.9401481925691	55.348	0.44153	55.669	55.485	55.926	0.32088	-0.036625	-0.0011094	NaN	20.871	39	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4045500	+		27910	8647	13809	13866							0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	489.939514	1466.79671	1.7013	0.00083354	2.6339	0.0012905	4.3352	0.002124	489.9408909469947	54.213	0.39138	55.617	55.38	55.771	1.4048	-0.088141	0.00089076	NaN	20.871	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2424000	+		27911	8647	13809	13866							0.08198487577305968
RDPHYRRALQR	11	Unmodified	_RDPHYRRALQR_					0	0	0			REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	REV__nc|ENSG00000059769|Q9H1X3-3|DNAJC25	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	489.939514	1466.79671	1.0868	0.00053248	2.4806	0.0012153	3.5674	0.0017478	490.27523583882424	53.673	0.40624	55.642	55.503	55.909	1.9697	-0.063347	0.0006654	NaN	20.871	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2187900	+		27912	8647	13809	13866							0.08198487577305968
RDPRTPKIVSP	11	Unmodified	_RDPRTPKIVSP_					0	0	0			REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3701660037041	2	633.369861	1264.72517	1.0752	0.000681	-0.69689	-0.00044139	0.37831	0.00023961	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	1.0084	1	33973	33973		3.2813	1.4371	1	5927400	+		27913	11580;14513	13810	13867	32047	32047					0.1033955510006308
RDQHAPARP	9	Unmodified	_RDQHAPARP_					0	0	0			REV__ENST00000381312.5_1_10:1230972-1279682:-|nuORF	REV__ENST00000381312.5_1_10:1230972-1279682:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.8531066775322	3	349.852935	1046.53697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.614	1	35.614	35.114	36.114	0								0	0	0	0.42184	1	14929	14929		6.6304	0.42459	1		+		27914	12774	13811	13868	32048	32048					0.015567419663284454
RDQHAPARP	9	Unmodified	_RDQHAPARP_					0	0	0			REV__ENST00000381312.5_1_10:1230972-1279682:-|nuORF	REV__ENST00000381312.5_1_10:1230972-1279682:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.8531066775322	3	349.852935	1046.53697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.875	1	35.875	35.375	36.375	0								0	0	0	0.39222	1	15040	15040		9.544	0.79857	1		+		27915	12774	13811	13868	32049	32049					0.015567419663284454
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2345764040947	3	433.234822	1296.68264	1.2034	0.00052136	-1.0932	-0.00047363	0.11018	4.7733E-05	433.2343726678343	42.214	5.2324	42.214	41.821	47.053	0					309	167	2	0	0	0	0.83687	5	17616	17616;17668;18218;18446;18647		7.846	0.36898	1	56976000	+		27916	8914	13812	13869	32050;32051;32052;32053;32054	32050					0.04616159971874367
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2352477908134	3	433.234822	1296.68264	2.2864	0.00099055	-1.5553	-0.0006738	0.73112	0.00031675	433.23406205528755	40.981	6.4739	42.306	41.623	48.097	1.3254					333	206	4	0	0	0	0.6971	5	17775	17775;17937;18008;18214;18444		11.065	3.5882	1	9219400	+		27917	8914	13812	13869	32055;32056;32057;32058;32059	32055					0.04616159971874367
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2372314333916	3	433.234822	1296.68264	3.2836	0.0014226	0.032402	1.4038E-05	3.316	0.0014366	433.234816386003	112.91	0.22537	113.08	113.04	113.26	0.16914					9	6	2	0	0	0	0.83687	1	48979	48979		7.846	0.36898	1	1002300	+		27918	8914	13812	13869	32060	32060					0.04616159971874367
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	649.3481323122978	2	649.348594	1296.68264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.84	1	41.151	40.651	41.651	1.3102								0	0	0	0.63769	1	16710	16710		13.615	1.3742	1		+		27919	8914	13812	13869	32061	32061					0.04616159971874367
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2356140017509	3	433.234822	1296.68264	2.0532	0.0008895	-1.0932	-0.00047362	0.95994	0.00041588	433.23443561570656	40.604	2.3378	42.467	41.615	43.952	1.8624					107	74	2	0	0	0	0.94496	1	17149	17149		3.5927	0.52041	1	1758500	+		27920	8914	13812	13869	32062	32062					0.04616159971874367
RDQLWDPILAA	11	Unmodified	_RDQLWDPILAA_					0	0	0			REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	REV__ENST00000560849.2_2_15:50868060-50878706:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	433.234822	1296.68264	2.0532	0.0008895	-1.0932	-0.00047362	0.95994	0.00041588	433.23443561570656	40.604	2.3378	42.467	41.615	43.952	1.8624	0.13771	0.00030746	NaN	11.065	107	74	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1758500	+		27921	8914	13812	13869							0.04616159971874367
RDQPFIKKMH	10	Unmodified	_RDQPFIKKMH_					0	0	0		ENSG00000172352|ENST00000382407|CDY1B;ENSG00000172288|ENST00000306609|CDY1	ENSG00000172352|ENST00000382407|CDY1B	ENSG00000172352|ENST00000382407|CDY1B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	433.2346984744072	3	433.90453	1298.69176	1.1918	0.00051713	-3.4727	-0.0015068	-2.2809	-0.0009897	433.90300030109285	42.194	0.65625	42.194	41.918	42.574	0					43	20	3	0	0	0	0.12523	1	17668	17668		8.4443	0.59826	1	5217600			27922	4234	13813	13870	32063	32063					0.05436230056511704
RDRIRLRP	8	Unmodified	_RDRIRLRP_					0	0	0			REV__ENST00000216068.8_1_22:39174586-39174781:-|nuORF	REV__ENST00000216068.8_1_22:39174586-39174781:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3389160037041	2	541.338698	1080.66284	1.7852	0.00096641	-0.79659	-0.00043123	0.98864	0.00053519	541.3381543684688	80.993	1.0405	80.993	80.572	81.613	0					56	33	3	0	0	0	0.89178	1	33633	33633		0.69038	0	1	2232100	+		27923	12065	13814	13871	32064	32064					0.1257387354239654
RDRPLLLR	8	Unmodified	_RDRPLLLR_					0	0	0			REV__ENST00000371600.7_1_9:139937867-139938101:-|nuORF	REV__ENST00000371600.7_1_9:139937867-139938101:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.8344604372978	2	519.830175	1037.6458	3.3128	0.0017221	-0.24466	-0.00012718	3.0681	0.0015949	519.8302265433025	107.6	0.18365	107.76	107.64	107.83	0.15781					29	9	4	0	0	0	0.89051	1	46300	46300		2.3027	0	1	161640000	+		27924	12672	13815	13872	32065	32065					0.12847952936590445
RDSAYQYLFK	10	Unmodified	_RDSAYQYLFK_					0	0	0			REV__ENST00000326361.7_2_3:179051453-179051519:+|nuORF	REV__ENST00000326361.7_2_3:179051453-179051519:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890563845634	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.51	1	32.51	32.01	33.01	0								0	0	0	0.66222	1	13620	13620		0.69767	0.07084	1		+		27925	12432	13816	13873	32066	32066					0.007201845634426718
RDSCWHSSV	9	Unmodified	_RDSCWHSSV_					0	0	0		ENST00000507005.1_1_6:146350692-146480734:+|nuORF;nc|ENSG00000152822|Q13255-2|GRM1;nc|ENSG00000152822|Q13255-3|GRM1;ENSG00000152822|ENST00000282753|GRM1	ENST00000507005.1_1_6:146350692-146480734:+|nuORF	ENST00000507005.1_1_6:146350692-146480734:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4913207888603	3	359.490786	1075.45053	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.908	1	75.226	74.726	75.726	1.318								0	0	0	0.39385	1	31014	31014		9.544	0.79857	1				27926	3340	13817	13874	32067	32067					-0.0841800565056019
RDSMYEGNIC	10	Unmodified	_RDSMYEGNIC_					0	0	0			REV__nc|ENSG00000197381|P78563-6|ADARB1	REV__nc|ENSG00000197381|P78563-6|ADARB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.4971801638603	3	396.498841	1186.47469	-1.194	-0.00047341	-0.0058769	-2.3302E-06	-1.1999	-0.00047574	396.4996278581576	10.473	1.483	10.473	9.9062	11.389	0					63	47	2	0	0	0	0.86348	1	4406	4406		5.4027	0.10583	1	952150	+		27927	11670	13818	13875	32068	32068					-0.11108533279184485
RDTLFWEL	8	Unmodified	_RDTLFWEL_					0	0	0			REV__BCAM|p.S491Qfs*33|1|0.06|ENSG00000187244|chr19:44819182-44819183|-/G|frameshift_variant	REV__BCAM|p.S491Qfs*33|1|0.06|ENSG00000187244|chr19:44819182-44819183|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.2778808474541	2	540.279649	1078.54475	1.7707	0.0009567	-2.5998	-0.0014046	-0.82908	-0.00044793	540.2784780137486	47.634	0.38508	47.965	47.81	48.196	0.33034					21	12	3	0	0	0	0.87276	1	20018	20018		13.508	0.46542	1	871040	+		27928	8160	13819	13876	32069	32069					0.00861456443226416
RDTRVPTL	8	Unmodified	_RDTRVPTL_					0	0	0		ENST00000556539.5_1_12:56737175-56743495:-|nuORF	ENST00000556539.5_1_12:56737175-56743495:-|nuORF	ENST00000556539.5_1_12:56737175-56743495:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2783996462822	2	479.277441	956.540328	2.163	0.0010367	-0.11401	-5.4641E-05	2.049	0.00098205	479.2773897537301	80.418	0.50079	80.418	80.165	80.666	0					38	15	3	0	0	0	0.88663	1	33432	33432		4.756	0	1	7658600			27929	7306	13820	13877	32070	32070					0.06031992020314192
RDVELFFIFLL	11	Unmodified	_RDVELFFIFLL_					0	0	0		L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|170|1|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|170|1|anti-sense	L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|170|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2720825076103	3	471.270984	1410.79112	3.2709	0.0015415	-0.43303	-0.00020408	2.8378	0.0013374	471.27038399245555	64.795	0.49949	66.202	65.985	66.484	1.4071					40	15	4	0	0	0	0.96769	1	27175	27175		2.6312	0	1	1548900			27930	7733	13821	13878	32071	32071					0.10215951222289732
RDVHSRSKQSC	11	Unmodified	_RDVHSRSKQSC_					0	0	0			REV__ENST00000325327.3_1_19:2429314-2429548:-|nuORF	REV__ENST00000325327.3_1_19:2429314-2429548:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8820983767509	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7506	1	9.3871	8.8871	9.8871	0.63651								0	0	0	0.63775	1	3633	3633		0.08335	0	1		+		27931	12427	13822	13879	32072	32072					-0.012882108563189831
RDVKRRRRR	9	Unmodified	_RDVKRRRRR_					0	0	0			REV__nc|ENSG00000126012|P41229-3|KDM5C	REV__nc|ENSG00000126012|P41229-3|KDM5C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	324.7077514529228	4	325.209164	1296.80755	-1.9304	-0.00062777	1.2487	0.0004061	-0.68165	-0.00022168	325.2093022861019	45.13	0.25366	45.13	44.933	45.187	0					10	7	2	0	0	0	0.11866	1	18896	18896		4.1895	1.4543	1	734320	+		27932	9692	13823	13880	32073	32073					0.17101934742254343
RDVKRRRRREL	11	Unmodified	_RDVKRRRRREL_					0	0	0			REV__nc|ENSG00000126012|P41229-3|KDM5C	REV__nc|ENSG00000126012|P41229-3|KDM5C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1540405154228	4	385.740828	1538.93421	2.306	0.00088953	-2.8509	-0.0010997	-0.54489	-0.00021019	385.7400608588207	75.97	0.4659	76.292	75.988	76.453	0.32163					31	14	3	0	0	0	0.14606	1	31705	31705		0.094841	0.094841	1	599890	+		27933	9692	13824	13881	32074	32074					0.18629816176712666
RDVLKDVLLPW	11	Unmodified	_RDVLKDVLLPW_					0	0	0		ENST00000472894.1_1_9:95018893-95021273:-|nuORF;ENSG00000196305|ENST00000443024|IARS1	ENST00000472894.1_1_9:95018893-95021273:-|nuORF	ENST00000472894.1_1_9:95018893-95021273:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9343139529228	3	451.934484	1352.78162	2.2031	0.00099564	-2.633	-0.00119	-0.42998	-0.00019432	451.9339659476487	83.295	1.2912	83.295	82.585	83.876	0					71	41	3	0	0	0	1.0366	1	34710	34710		1.2148	0.80657	1	1149800			27934	4932	13825	13882	32075	32075					0.1193418293673858
RDYNPYNYSD	10	Unmodified	_RDYNPYNYSD_					0	0	0		nc|ENSG00000163539|O75122|CLASP2;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2	nc|ENSG00000163539|O75122|CLASP2	nc|ENSG00000163539|O75122|CLASP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	436.1828796267509	3	436.182675	1305.52619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.81	1	110.86	110.36	111.36	0.047043								0	0	0	0.66254	1	47794	47794		0.15932	0	1				27935	3697	13826	13883	32076	32076					-0.11434749989280135
REAGVKKKK	9	Unmodified	_REAGVKKKK_					0	0	0			REV__ENST00000454171.1_1_7:84657519-84657798:+|nuORF	REV__ENST00000454171.1_1_7:84657519-84657798:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3403198122978	2	522.337833	1042.66111	3.1856	0.001664	1.4784	0.00077221	4.664	0.0024362	522.3386305184323	107.55	0.2633	107.71	107.56	107.83	0.15795					56	13	6	0	0	0	0.85068	1	46250	46250		0.45834	0.45834	1	2205400000	+		27936	13155	13827	13884	32077	32077					0.14148819733782148
REAVRFFQAV	10	Unmodified	_REAVRFFQAV_					0	0	0			REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	REV__ENST00000496281.1_1_20:62321467-62323226:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.8397094607353	2	611.838197	1221.66184	3.0617	0.0018733	0.12529	7.6659E-05	3.187	0.0019499	612.340930415207	85.112	1.4263	86.708	86.064	87.491	1.5962					277	55	7	0	0	0	0.89803	1	35947	35947		1.4819	0.8804	1	138820000	+		27937	11979	13828	13885	32078	32078					0.05987614382843276
REAWKHLQ	8	Unmodified	_REAWKHLQ_					0	0	0			REV__ENST00000538126.5_1_16:71712656-71757677:-|nuORF	REV__ENST00000538126.5_1_16:71712656-71757677:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2928344607353	2	534.290882	1066.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.56	1	105.71	105.21	106.21	0.15859								0	0	0	1.0178	1	44986	44986		2.0598	0.21551	1		+		27938	8596	13829	13886	32079	32079					0.03659100631512047
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.2760497927666	2	584.275095	1166.53564	1.0045	0.00058692	-0.27106	-0.00015838	0.73347	0.00042855	584.2750014205444	22.499	0.74002	22.499	22.276	23.016	0					69	24	5	0	0	0	0.0039507	4	9352	9308;9352;9409;9478		124.95	89.04	1	39824000			27939	3217	13830	13887	32080;32081;32082;32083	32081					-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.8524352908134	3	389.852489	1166.53564	-0.88371	-0.00034452	1.0342	0.00040317	0.15045	5.8652E-05	389.8530154993472	22.501	0.38807	22.501	22.276	22.664	0					32	12	4	0	0	0	0.046715	2	9358	9358;9411		57.108	47.564	1	15317000			27940	3217	13830	13887	32084;32085	32084					-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.2755004763603	2	584.275095	1166.53564	0.59242	0.00034613	-0.73217	-0.00042779	-0.13975	-8.1652E-05	584.274657570195	22.187	0.46877	22.41	22.205	22.674	0.223					36	15	3	0	0	0	0.013628	3	9247	9201;9247;9302		104.48	81.748	1	8464600			27941	3217	13830	13887	32086;32087;32088	32087					-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2754394412041	2	584.275095	1166.53564	0.95684	0.00055906	-0.94755	-0.00055363	0.0092954	5.4311E-06	584.2743600743003	21.329	0.42097	22.506	22.298	22.719	1.177					37	13	4	0	0	0	0.018305	2	8916	8868;8916		100.71	77.972	1	4417500			27942	3217	13830	13887	32089;32090	32090					-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2756225466728	2	584.275095	1166.53564	0.39458	0.00023054	0.63799	0.00037276	1.0326	0.0006033	584.2751979245153	20.908	0.39251	22.483	22.32	22.712	1.5748					29	12	3	0	0	0	0.071837	2	8742	8690;8742		59.368	37.622	1	3380000			27943	3217	13830	13887	32091;32092	32092					-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	389.852489	1166.53564	0.70257	0.0002739	-0.81909	-0.00031932	-0.11651	-4.5424E-05	389.85217994340655	22.198	0.26688	22.421	22.289	22.556	0.223	-0.06109	-0.001036	NaN	57.108	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3931100			27944	3217	13830	13887							-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	389.852489	1166.53564	0.36858	0.00014369	-0.4589	-0.0001789	-0.090318	-3.5211E-05	389.85231448964726	21.314	0.30168	22.491	22.357	22.658	1.177	0.0089734	-0.00061472	NaN	57.108	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1937700			27945	3217	13830	13887							-0.040969369131062194
REDDPNFFK	9	Unmodified	_REDDPNFFK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	389.852489	1166.53564	0.24757	9.6516E-05	0.17927	6.9889E-05	0.42684	0.00016641	389.8525847082195	20.941	0.27247	22.515	22.349	22.622	1.5748	0.033275	0.00013167	NaN	57.108	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1672600			27946	3217	13830	13887							-0.040969369131062194
REDELQRRK	9	Unmodified	_REDELQRRK_					0	0	0			REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	615.3437988162041	2	615.339092	1228.66363	2.4861	0.0015298	1.7692	0.0010886	4.2552	0.0026184	615.3423166091613	87.001	0.48088	87.244	86.96	87.441	0.24387					48	19	4	0	0	0	0.83753	1	36496	36496		1.8442	0	1	10425000	+		27947	8956	13831	13888	32093	32093					0.058446234007988096
REDELQRRK	9	Unmodified	_REDELQRRK_					0	0	0			REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	615.339092	1228.66363	2.4861	0.0015298	1.7692	0.0010886	4.2552	0.0026184	615.3423166091613	87.001	0.48088	87.244	86.96	87.441	0.24387	-0.01265	-0.0022663	NaN	1.8442	48	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10425000	+		27948	8956	13831	13888							0.058446234007988096
REDELQRRK	9	Unmodified	_REDELQRRK_					0	0	0			REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	615.339092	1228.66363	3.2927	0.0020262	5.8596	0.0036056	9.1523	0.0056318	615.3433232942722	86.405	0.55257	87.531	87.462	88.015	1.1265	0.27447	0.0027677	NaN	1.8442	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3697900	+		27949	8956	13831	13888							0.058446234007988096
REDELQRRK	9	Unmodified	_REDELQRRK_					0	0	0			REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	REV__ENST00000592870.5_1_19:709146-734268:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	615.339092	1228.66363	3.1589	0.0019438	4.9457	0.0030433	8.1046	0.0049871	615.3434359820944	85.448	0.14265	86.995	86.916	87.059	1.547	-0.26182	0.0016429	NaN	1.8442	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1477400	+		27950	8956	13831	13888							0.058446234007988096
REEHHFMV	8	Unmodified	_REEHHFMV_					0	0	0		ENSG00000148734|ENST00000277942|NPFFR1	ENSG00000148734|ENST00000277942|NPFFR1	ENSG00000148734|ENST00000277942|NPFFR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	362.2226440310478	3	362.171276	1083.492	2.5574	0.00092622	-0.76918	-0.00027858	1.7882	0.00064765	362.1712108877526	62.032	0.40056	63.99	63.719	64.12	1.9571					24	12	3	0	0	0	2.3239	1	26026	26026		1.6526	0.17072	1	2049000			27951	3219	13832	13889	32094	32094					-0.04640824891225748
REEKRLGKTPP	11	Unmodified	_REEKRLGKTPP_					0	0	0			REV__ENSG00000177051|ENST00000317683|FBXO46	REV__ENSG00000177051|ENST00000317683|FBXO46	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.2002746462822	4	328.443935	1309.74663	-2.2649	-0.0007439	1.5234	0.00050036	-0.74148	-0.00024354	328.4442073069022	34.182	0.76193	34.182	33.638	34.4	0					39	24	2	0	0	0	0.14606	1	14233	14233		3.5927	2.0004	1	1485700	+		27952	11203	13833	13890	32095	32095					0.10414940128794115
REEKRLGKTPP	11	Unmodified	_REEKRLGKTPP_					0	0	0			REV__ENSG00000177051|ENST00000317683|FBXO46	REV__ENSG00000177051|ENST00000317683|FBXO46	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	328.1995422244072	4	328.443935	1309.74663	0.27497	9.0313E-05	-1.7969	-0.00059018	-1.5219	-0.00049986	328.44311269625933	31.067	0.36338	32.891	32.712	33.075	1.8246					19	11	2	0	0	0	0.14606	1	13058	13058		3.5927	2.4829	1	1235500	+		27953	11203	13833	13890	32096	32096					0.10414940128794115
REERCKWSTC	10	Unmodified	_REERCKWSTC_					0	0	0			REV__ENST00000509427.5_1_5:111092854-111093066:-|nuORF	REV__ENST00000509427.5_1_5:111092854-111093066:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	648.7925903201103	2	649.292439	1296.57032	2.0085	0.0013041	-0.20018	-0.00012997	1.8083	0.0011741	649.2927253004613	40.533	0.18896	41.843	41.756	41.945	1.3102					8	5	2	0	0	0	0.12545	1	17007	17007		3.5965	0.60125	1	357050	+		27954	13561	13834	13891	32097	32097					-0.0660976036831471
REERRKQRDR	10	Unmodified	_REERRKQRDR_					0	0	0			REV__ENSG00000185352|ENST00000376705|HS6ST3	REV__ENSG00000185352|ENST00000376705|HS6ST3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1993286013603	3	476.93454	1427.78179	1.0056	0.00047962	-2.7009	-0.0012881	-1.6952	-0.00080852	476.9333486771844	13.26	0.15392	13.359	13.312	13.465	0.09944					7	4	2	0	0	0	0.1256	1	5501	5501		0	0	1	264990	+		27955	11461	13835	13892	32098	32098					0.08500995709300696
REFFFFFF	8	Unmodified	_REFFFFFF_					0	0	0			REV__ENST00000526451.5_1_11:65764737-65764839:-|nuORF	REV__ENST00000526451.5_1_11:65764737-65764839:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	593.2223998904228	2	593.789653	1185.56475	1.4383	0.00085408	2.0845	0.0012378	3.5228	0.0020918	593.7913064625476	77.211	0.31779	78.962	78.818	79.136	1.7514					15	9	2	0	0	0	2.3239	1	32388	32388		24.674	0	1	1598500	+		27956	13667	13836	13893	32099	32099					-0.02060747826158149
REFLLPRHPPI	11	Unmodified	_REFLLPRHPPI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1730834841728	3	458.93834	1373.79319	2.0376	0.00093512	-0.91939	-0.00042194	1.1182	0.00051318	459.27352553076537	42.536	0.18633	44.458	44.384	44.57	1.9211					7	5	2	0	0	0	0.14606	1	17864	17864		0.40827	0.24894	1	398210			27957	4351	13837	13894	32100	32100					0.12124424750777507
REFRAKKKD	9	Unmodified	_REFRAKKKD_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3449584841728	2	589.343646	1176.67274	2.2704	0.0013381	-0.47629	-0.0002807	1.7941	0.0010574	589.3433130884748	91.835	0.44281	91.835	91.597	92.04	0					23	13	2	0	0	0	0.83753	1	38427	38427		1.8442	0	1	1900000	+		27958	10858	13838	13895	32101	32101					0.09147016757128767
REFRAKKKD	9	Unmodified	_REFRAKKKD_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	589.343646	1176.67274	2.5427	0.0014985	-0.14769	-8.7037E-05	2.395	0.0014115	589.3435160249148	91.711	0.3567	91.901	91.755	92.112	0.19042	-0.073681	0.0001728	NaN	1.8442	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1852800	+		27959	10858	13838	13895							0.09147016757128767
REFRAKKKD	9	Unmodified	_REFRAKKKD_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	589.343646	1176.67274	4.1779	0.0024622	-0.066984	-3.9477E-05	4.1109	0.0024228	589.3435464661281	91.041	0.28567	92.023	91.91	92.196	0.98157	0.048139	0.00026792	NaN	1.8442	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	777970	+		27960	10858	13838	13895							0.09147016757128767
REFRAKKKD	9	Unmodified	_REFRAKKKD_					0	0	0			REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	REV__nc|ENSG00000167210|Q8IVV2-4|LOXHD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	589.343646	1176.67274	3.7234	0.0021944	-0.64373	-0.00037938	3.0797	0.001815	589.3431003166058	90.774	0.2877	92.14	91.961	92.249	1.366	0.16484	-0.00041188	NaN	1.8442	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	623760	+		27961	10858	13838	13895							0.09147016757128767
REHERHRDR	9	Unmodified	_REHERHRDR_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7;ENST00000537641.5_1_11:61178417-61183276:-|nuORF	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8887817263603	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.269	1	21.394	20.894	21.894	1.1254								0	0	0	0.42693	1	8443	8443		0.86438	0	1				27962	3244	13839	13896	32102	32102					0.011725065495966192
REHERHRDR	9	Unmodified	_REHERHRDR_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7;ENST00000537641.5_1_11:61178417-61183276:-|nuORF	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.388	1	21.514	21.014	22.014	1.1254								0	0	0	0.42693	1	8495	8495		0.86438	0	1				27963	3244	13839	13896	32103	32103					0.011725065495966192
REHVLARY	8	Unmodified	_REHVLARY_					0	0	0			REV__ENST00000559042.1_1_14:24612781-24612898:-|nuORF	REV__ENST00000559042.1_1_14:24612781-24612898:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2884399294853	2	522.290882	1042.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.14	1	103.32	102.82	103.82	0.18066								0	0	0	1.0178	1	43406	43406		0.69038	0	1		+		27964	9013	13840	13897	32104	32104					0.04763100631521411
REKAKEFLVSK	11	Unmodified	_REKAKEFLVSK_					0	0	0		ENSG00000146263|ENST00000683635|MMS22L	ENSG00000146263|ENST00000683635|MMS22L	ENSG00000146263|ENST00000683635|MMS22L	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.6261779665947	3	445.597871	1333.77178	1.3844	0.00061688	3.1374	0.001398	4.5218	0.0020149	445.9344765442876	95.918	0.20173	95.918	95.803	96.005	0					10	6	2	0	0	0	0.14606	1	40081	40081		1.0136	0.74455	1	2280100			27965	3143	13841	13898	32105	32105					0.11824994931362198
REKGRRWSYRR	11	Unmodified	_REKGRRWSYRR_					0	0	0			REV__ENST00000474612.1_1_6:32163881-32164117:-|nuORF	REV__ENST00000474612.1_1_6:32163881-32164117:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2933837771416	3	517.290546	1548.84981	1.4607	0.00075563	1.2117	0.00062681	2.6725	0.0013824	517.6252793759891	113.5	7.1668	113.5	112.85	120.01	0					631	222	3	0	0	0	1.0402	1	51644	51644		0.094841	0	1	6251800	+		27966	13309	13842	13899	32106	32106					0.09733865359953597
REKLSRPLVPT	11	Unmodified	_REKLSRPLVPT_					0	0	0			REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|277|2|anti-sense	REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|277|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	432.6015502810478	3	432.597983	1294.77212	4.147	0.001794	2.3062	0.00099765	6.4532	0.0027916	432.59896265354115	95.422	0.42627	95.843	95.58	96.006	0.4212					42	17	4	0	0	0	1.0282	1	40160	40160		2.084	0.49169	1	12807000	+		27967	14205	13843	13900	32107	32107					0.13652414651210165
REKWREYAQ	9	Unmodified	_REKWREYAQ_					0	0	0			REV__KIAA0408|p.K370Nfs*28|1|0.03|ENSG00000189367|chr6:127447209-127447210|-/ACTCGGTCTCCAGTCATGCTCGTGGAGCATA|frameshift_variant	REV__KIAA0408|p.K370Nfs*28|1|0.03|ENSG00000189367|chr6:127447209-127447210|-/ACTCGGTCTCCAGTCATGCTCGTGGAGCATA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3266479372978	2	633.322911	1264.63127	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.849	1	42.742	42.242	43.242	1.8927								0	0	0	0.41514	1	17122	17122		7.2892	1.0834	1		+		27968	11611	13844	13901	32108	32108					0.00953835997825081
RELKKRKRKEK	11	Unmodified	_RELKKRKRKEK_					0	0	0			REV__ENSG00000145331|ENST00000394876|TRMT10A	REV__ENSG00000145331|ENST00000394876|TRMT10A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1279785037041	5	300.598869	1497.95796	-0.176	-5.2905E-05	-0.80417	-0.00024173	-0.98017	-0.00029464	300.79947588464177	21.961	0.14857	23.138	23.022	23.17	1.177					6	4	2	0	0	0	0.14606	1	9173	9173		0	0	1	160060	+		27969	10271	13845	13902	32109	32109					0.22890236890498272
REPALGQG	8	Unmodified	_REPALGQG_					0	0	0		nc|ENSG00000162302|O75676-2|RPS6KA4;ENSG00000162302|ENST00000334205|RPS6KA4	nc|ENSG00000162302|O75676-2|RPS6KA4	nc|ENSG00000162302|O75676-2|RPS6KA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	827.4415771365166	1	827.436992	826.429715	2.771	0.0022928	2.0657	0.0017092	4.8367	0.0040021	827.4385310528198	104.71	0.29816	104.77	104.67	104.97	0.056801					31	15	3	0	0	0	0.89051	1	44225	44225		2.3027	0	1	27427000			27970	3611	13846	13903	32110	32110					0.009557720321026864
REPIRDIKKLK	11	Unmodified	_REPIRDIKKLK_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	465.3428832888603	3	465.964666	1394.87217	3.4379	0.001602	-0.40813	-0.00019017	3.0298	0.0014118	465.9635926811241	105.83	0.12095	105.89	105.82	105.94	0.05455					13	5	3	0	0	0	0.14606	1	44999	44999		0	0	1	16844000	+		27971	9664	13847	13904	32111	32111					0.19052651984998192
REPIRDIKKLK	11	Unmodified	_REPIRDIKKLK_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	465.964666	1394.87217	1.5708	0.00073196	1.2101	0.00056387	2.7809	0.0012958	466.3001768322052	105.88	0.11636	105.88	105.81	105.93	0	-0.048825	0.0022498	NaN	0	14	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18435000	+		27972	9664	13847	13904							0.19052651984998192
REPIRDIKKLK	11	Unmodified	_REPIRDIKKLK_					0	0	0			REV__ENSG00000125351|ENST00000276201|UPF3B	REV__ENSG00000125351|ENST00000276201|UPF3B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	465.964666	1394.87217	3.5554	0.0016567	-1.3933	-0.00064921	2.1621	0.0010075	465.964001035612	105.8	0.36517	105.96	105.65	106.01	0.16679	0.034886	-0.0013895	NaN	0	38	18	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	74225000	+		27973	9664	13847	13904							0.19052651984998192
RERDKERERQR	11	Unmodified	_RERDKERERQR_					0	0	0		nc|ENSG00000123200|Q5T200-2|ZC3H13;nc|ENSG00000123200|Q5T200|ZC3H13;ENSG00000123200|ENST00000679008|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	nc|ENSG00000123200|Q5T200-2|ZC3H13	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	390.7339355349541	4	390.213372	1556.82438	1.8966	0.00074007	-1.2665	-0.00049422	0.63005	0.00024585	390.4642979274808	62.722	1.494	63.051	62.105	63.599	0.32974					74	47	2	0	0	0	0.14606	1	26086	26086		0.40827	0	1	839330			27974	2184	13848	13905	32112	32112					0.06824346046869323
RERDRHREH	9	Unmodified	_RERDRHREH_					0	0	0			REV__ENST00000537641.5_1_11:61178417-61183276:-|nuORF	REV__ENST00000537641.5_1_11:61178417-61183276:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884460330009	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.29	1	2.29	1.79	2.79	0								0	0	0	0.42693	1	939	939		0.26902	0	1		+		27975	10373	13849	13906	32113	32113					0.011725065495966192
RERDRHREH	9	Unmodified	_RERDRHREH_					0	0	0			REV__ENST00000537641.5_1_11:61178417-61183276:-|nuORF	REV__ENST00000537641.5_1_11:61178417-61183276:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0234	1	4.1254	3.6254	4.6254	0.10199								0	0	0	0.42693	1	1661	1661		0.26902	0	1		+		27976	10373	13849	13906	32114	32114					0.011725065495966192
RERGEKPKKK	10	Unmodified	_RERGEKPKKK_					0	0	0		ENST00000418170.5_1_22:35660034-35689641:+|nuORF;ENSG00000100281|ENST00000216106|HMGXB4	ENST00000418170.5_1_22:35660034-35689641:+|nuORF	ENST00000418170.5_1_22:35660034-35689641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3842651247978	2	628.383303	1254.75205	1.7095	0.0010742	-0.070005	-4.399E-05	1.6395	0.0010302	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.89803	1	33295	33295		1.3295	0	1	7710600			27977	1259	13850	13907	32115	32115					0.13486663711250912
RERLALCHI	9	Unmodified	_RERLALCHI_					0	0	0			REV__nc|ENSG00000131652|Q86W42-3|THOC6	REV__nc|ENSG00000131652|Q86W42-3|THOC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.8148681521416	2	555.813667	1109.61278	1.7527	0.00097418	1.7905	0.00099517	3.5432	0.0019694	555.8150290013268	79.668	0.25436	79.968	79.877	80.131	0.30047					11	7	2	0	0	0	0.77526	1	33327	33327		4.3292	0	1	437520	+		27978	9821	13851	13908	32116	32116					0.06236002822242881
RERLALCHI	9	Unmodified	_RERLALCHI_					0	0	0			REV__nc|ENSG00000131652|Q86W42-3|THOC6	REV__nc|ENSG00000131652|Q86W42-3|THOC6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	555.813667	1109.61278	1.7527	0.00097418	1.7905	0.00099517	3.5432	0.0019694	555.8150290013268	79.668	0.25436	79.968	79.877	80.131	0.30047	-0.0097214	-0.00068758	NaN	4.3292	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	437520	+		27979	9821	13851	13908							0.06236002822242881
RERLALCHI	9	Unmodified	_RERLALCHI_					0	0	0			REV__nc|ENSG00000131652|Q86W42-3|THOC6	REV__nc|ENSG00000131652|Q86W42-3|THOC6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	555.813667	1109.61278	2.6903	0.0014953	6.9621	0.0038696	9.6525	0.005365	555.8173663192804	78.721	0.22094	79.988	79.909	80.13	1.2668	0.0097214	0.0050614	NaN	4.3292	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	978620	+		27980	9821	13851	13908							0.06236002822242881
RERLEELVEEP	11	Unmodified	_RERLEELVEEP_					0	0	0			REV__tr|A0A553SHP6|A0A553SHP6_NIACIHTHdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13395PE=4SV=1	REV__tr|A0A553SHP6|A0A553SHP6_NIACIHTHdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_13395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9103881716728	3	466.912296	1397.71506	1.6979	0.00079275	-3.7314	-0.0017422	-2.0335	-0.00094948	466.9101566168152	31.226	0.82961	31.226	30.959	31.789	0					40	26	2	0	0	0	1.0224	1	13050	13050		2.4348	0.97967	1	1082600	+		27981	14807	13852	13909	32117	32117					0.032109025842146366
RERLFKKRQLW	11	Unmodified	_RERLFKKRQLW_					0	0	0			REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.6497070193291	3	520.64756	1558.92085	1.5657	0.00081519	3.0696	0.0015982	4.6353	0.0024134	520.6492258068179	98.519	0.10719	98.519	98.449	98.556	0					10	3	4	0	0	0	1.0402	1	41205	41205		0.094841	0	1	32612000	+		27982	9739	13853	13910	32118	32118					0.16374565344790426
RERLFKKRQLW	11	Unmodified	_RERLFKKRQLW_					0	0	0			REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.6508666872978	3	520.64756	1558.92085	2.9105	0.0015153	2.9137	0.001517	5.8242	0.0030324	520.6492964018328	98.498	0.1173	98.579	98.504	98.621	0.080376					7	4	2	0	0	0	1.0402	1	41225	41225		0.094841	0.094841	1	39168000	+		27983	9739	13853	13910	32119	32119					0.16374565344790426
RERLFKKRQLW	11	Unmodified	_RERLFKKRQLW_					0	0	0			REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	520.64756	1558.92085	1.5657	0.00081519	3.0696	0.0015982	4.6353	0.0024134	520.6492258068179	98.519	0.10719	98.519	98.449	98.556	0	-0.056337	-0.00042176	NaN	0.094841	10	3	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32612000	+		27984	9739	13853	13910							0.16374565344790426
RERLFKKRQLW	11	Unmodified	_RERLFKKRQLW_					0	0	0			REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	520.64756	1558.92085	2.9105	0.0015153	2.9137	0.001517	5.8242	0.0030324	520.6492964018328	98.498	0.1173	98.579	98.504	98.621	0.080376	0.0032266	-0.00066524	NaN	0.094841	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39168000	+		27985	9739	13853	13910							0.16374565344790426
RERLFKKRQLW	11	Unmodified	_RERLFKKRQLW_					0	0	0			REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	REV__ENST00000560809.5_1_15:52532054-52548856:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	520.64756	1558.92085	3.7059	0.0019295	4.1936	0.0021834	7.8995	0.0041129	520.6496110937447	98.401	0.11301	98.629	98.556	98.669	0.22776	0.05311	0.0013339	NaN	0.094841	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8634000	+		27986	9739	13853	13910							0.16374565344790426
RERVKRRQPV	10	Unmodified	_RERVKRRQPV_					0	0	0		CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.9407531619072	3	441.940855	1322.80073	2.7478	0.0012144	-1.3225	-0.00058445	1.4253	0.00062992	441.93986464162555	44.514	0.2872	45.88	45.706	45.993	1.3653					12	8	2	0	0	0	0.89803	1	18670	18670		1.4551	0.24029	1	414040			27987	145	13854	13911	32120	32120					0.15224577071035128
RERVKRRQPV	10	Unmodified	_RERVKRRQPV_					0	0	0		CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	CEACAM18|p.N95Kfs*14|1|0.74|ENSG00000213822|chr19:51480564-51480565|AC/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	441.940855	1322.80073	2.2973	0.0010153	-1.9457	-0.00085989	0.35163	0.0001554	441.9397953772595	43.839	0.22338	45.783	45.639	45.862	1.9438	-0.048404	-0.00029526	NaN	1.4551	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622540			27988	145	13854	13911							0.15224577071035128
RESRRREIREK	11	Unmodified	_RESRRREIREK_					0	0	0			REV__ENST00000592920.5_1_19:55652034-55658489:-|nuORF	REV__ENST00000592920.5_1_19:55652034-55658489:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.9374877810478	2	757.934754	1513.85495	3.0378	0.0023024	-0.11617	-8.8051E-05	2.9216	0.0022144	757.9346334011002	86.728	0.56137	87.82	87.528	88.09	1.0918					122	20	8	0	0	0	1.0405	1	36624	36624		0	0	1	36145000	+		27989	9162	13855	13912	32121	32121					0.11858124431910255
REVISHIG	8	Unmodified	_REVISHIG_					0	0	0		ENST00000512780.2_1_4:4459120-4543730:-|nuORF;ENSG00000168818|ENST00000306200|STX18	ENST00000512780.2_1_4:4459120-4543730:-|nuORF	ENST00000512780.2_1_4:4459120-4543730:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.1769592165947	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.86	1	101.93	101.43	102.43	0.067009								0	0	0	1.0178	1	42646	42646		0.45834	0	1				27990	4055	13856	13913	32122	32122					0.04484320474580272
REVRGLLG	8	Unmodified	_REVRGLLG_					0	0	0		ENST00000488141.5_1_22:37887199-37892645:-|nuORF;nc|ENSG00000100065|Q9BWT7-2|CARD10;ENSG00000100065|ENST00000251973|CARD10	ENST00000488141.5_1_22:37887199-37892645:-|nuORF	ENST00000488141.5_1_22:37887199-37892645:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2760497927666	2	450.274701	898.534849	2.9752	0.0013396	0.7141	0.00032154	3.6892	0.0016612	450.27495817116215	75.262	1.7473	76.568	76.09	77.837	1.3063					108	56	5	0	0	0	0.89176	1	31591	31591		0.79363	0	1	99267000			27991	1234	13857	13914	32123	32123					0.08152313228538333
REVVPRPRP	9	Unmodified	_REVVPRPRP_					0	0	0		ENSG00000115414|ENST00000354785|FN1;nc|ENSG00000115414|P02751-14|FN1;nc|ENSG00000115414|P02751-7|FN1;nc|ENSG00000115414|P02751-1|FN1;nc|ENSG00000115414|P02751-11|FN1;nc|ENSG00000115414|P02751-3|FN1;nc|ENSG00000115414|P02751-17|FN1;nc|ENSG00000115414|P02751-8|FN1;nc|ENSG00000115414|P02751-13|FN1;nc|ENSG00000115414|P02751-9|FN1;nc|ENSG00000115414|P02751-5|FN1;nc|ENSG00000115414|P02751-6|FN1;nc|ENSG00000115414|P02751-10|FN1;nc|ENSG00000115414|P02751-4|FN1;nc|ENSG00000115414|P02751-12|FN1;ENST00000492816.6_1_2:216226280-216244056:-|nuORF	ENSG00000115414|ENST00000354785|FN1	ENSG00000115414|ENST00000354785|FN1	MSMS	GG20161007_CRH_Patient100_W632_01	3	369.2217590212822	3	369.22448	1104.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.44	1	104.6	104.1	105.1	0.16055								0	0	0	0.42693	1	44240	44240		2.2828	0.19677	1				27992	1916	13858	13915	32124	32124					0.10347051448275124
REWIRHFFPKQ	11	Unmodified	_REWIRHFFPKQ_					0	0	0		ENSG00000213512|ENST00000294671|GBP7	ENSG00000213512|ENST00000294671|GBP7	ENSG00000213512|ENST00000294671|GBP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1543.828295886517	1	1543.82808	1542.8208	-0.16335	-0.00025218	1.143	0.0017647	0.9797	0.0015125	1543.8331533087085	36.004	0.20197	37.28	37.226	37.428	1.2762					13	9	2	0	0	0	1.0362	1	15112	15112		1.3295	0	1	9005200			27993	5221	13859	13916	32125	32125					0.07110328010958256
REWIRHFFPKQ	11	Unmodified	_REWIRHFFPKQ_					0	0	0		ENSG00000213512|ENST00000294671|GBP7	ENSG00000213512|ENST00000294671|GBP7	ENSG00000213512|ENST00000294671|GBP7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1544.330004870892	1	1543.82808	1542.8208	-0.14715	-0.00022718	0.42365	0.00065404	0.2765	0.00042686	1544.8281701173294	35.858	0.15181	37.134	37.074	37.226	1.2762					12	9	2	0	0	0	0.14606	1	15060	15060		1.3295	0	1	8157600			27994	5221	13859	13916	32126	32126					0.07110328010958256
REWVFHLKWWW	11	Unmodified	_REWVFHLKWWW_					0	0	0			REV__ENSG00000168282|ENST00000305386|MGAT2	REV__ENSG00000168282|ENST00000305386|MGAT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	558.7908203005791	3	558.289372	1671.84629	1.4839	0.00082844	-3.0901	-0.0017252	-1.6062	-0.00089674	558.2871689175545	46.329	0.64318	48.299	47.973	48.617	1.9703					24	20	2	0	0	0	0.14606	1	19467	19467		0.094841	0.094841	1	411720	+		27995	10902	13860	13917	32127	32127					0.037238025333863334
REYAQFLI	8	Unmodified	_REYAQFLI_					0	0	0			REV__nc|ENSG00000135100|P20823-5|HNF1A	REV__nc|ENSG00000135100|P20823-5|HNF1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2828857302666	2	520.282192	1038.54983	2.5797	0.0013422	4.0847	0.0021252	6.6644	0.0034674	520.2824975834274	49.893	0.63274	51.284	50.98	51.613	1.3911					30	19	3	0	0	0	0.77833	1	20891	20891		23.148	0	1	1257500	+		27996	9929	13861	13918	32128	32128					0.032097603058673485
REYAQFLI	8	Unmodified	_REYAQFLI_					0	0	0			REV__nc|ENSG00000135100|P20823-5|HNF1A	REV__nc|ENSG00000135100|P20823-5|HNF1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	520.282192	1038.54983	2.5797	0.0013422	4.0847	0.0021252	6.6644	0.0034674	520.2824975834274	49.893	0.63274	51.284	50.98	51.613	1.3911	0.017545	-0.0004224	NaN	23.148	30	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1257500	+		27997	9929	13861	13918							0.032097603058673485
REYWENLLPA	10	Unmodified	_REYWENLLPA_					0	0	0		nc|ENSG00000132840|Q9H2M3-2|BHMT2;ENSG00000132840|ENST00000255192|BHMT2	nc|ENSG00000132840|Q9H2M3-2|BHMT2	nc|ENSG00000132840|Q9H2M3-2|BHMT2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4173	1	3.1657	2.6657	3.6657	0.7484								0	0	0	0.66254	1	1003	1003		0.15932	0	1				27998	2548	13862	13919	32129	32129					0.007201845634881465
RFAALFAN	8	Unmodified	_RFAALFAN_					0	0	0		tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	455.2505370974541	2	455.250695	908.486836	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.261	1	89.318	88.818	89.818	1.0562								0	0	0	1.0178	1	37216	37216		0.69038	0	1				27999	17008	13863	13920	32130	32130					0.02893239308457396
RFEEAHFTF	9	Unmodified	_RFEEAHFTF_					0	0	0		ENST00000498436.2_1_1:145578572-145580415:+|nuORF;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENSG00000131788|ENST00000393045|PIAS3	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.2809936404228	2	592.28018	1182.54581	1.3302	0.00078784	0.11535	6.8319E-05	1.4455	0.00085616	592.2800884394857	38.004	0.53485	39.288	39.196	39.731	1.284					51	18	4	0	0	0	0.023685	4	15977	15929;15977;16016;16055		96.367	60.24	1	22076000			28000	2505	13864	13921	32131;32132;32133;32134	32132					-0.03816329187861811
RFEEAHFTF	9	Unmodified	_RFEEAHFTF_					0	0	0		ENST00000498436.2_1_1:145578572-145580415:+|nuORF;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENSG00000131788|ENST00000393045|PIAS3	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.5238220095634	3	395.189212	1182.54581	0.75814	0.00029961	0.41517	0.00016407	1.1733	0.00046368	395.18936103729857	38.069	0.34192	39.353	39.246	39.588	1.284					25	10	3	0	0	0	0.099302	1	15972	15972		39.213	30.237	1	6625300			28001	2505	13864	13921	32135	32135					-0.03816329187861811
RFEEAHFTF	9	Unmodified	_RFEEAHFTF_					0	0	0		ENST00000498436.2_1_1:145578572-145580415:+|nuORF;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENSG00000131788|ENST00000393045|PIAS3	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.2808715701103	2	592.28018	1182.54581	0.79808	0.00047269	0.37872	0.00022431	1.1768	0.000697	592.2803938653963	37.42	0.61618	39.241	39.023	39.64	1.8202					66	22	4	0	0	0	0.0070725	5	15688	15643;15688;15735;15774;15824		114.2	70.343	1	16033000			28002	2505	13864	13921	32136;32137;32138;32139;32140	32137					-0.03816329187861811
RFEEAHFTF	9	Unmodified	_RFEEAHFTF_					0	0	0		ENST00000498436.2_1_1:145578572-145580415:+|nuORF;ENST00000369299.7_1_1:145575401-145580415:+|nuORF;ENSG00000131788|ENST00000393045|PIAS3	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	ENST00000498436.2_1_1:145578572-145580415:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	395.189212	1182.54581	0.5776	0.00022826	0.30107	0.00011898	0.87867	0.00034724	395.189326242612	37.442	0.35047	39.262	39.078	39.429	1.8202	-0.04569	-4.8386E-05	NaN	39.213	34	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6529600			28003	2505	13864	13921							-0.03816329187861811
RFERRKPNS	9	Unmodified	_RFERRKPNS_					0	0	0			REV__ENST00000591793.1_1_19:44586217-44589882:+|nuORF	REV__ENST00000591793.1_1_19:44586217-44589882:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	397.2334167361259	3	397.223139	1188.64759	1.1281	0.0004481	0.69417	0.00027574	1.8222	0.00072384	397.5585985395247	58.195	0.52577	60.164	59.931	60.457	1.969					21	16	2	0	0	0	0.11944	1	24323	24323		0.20686	0	1	2520400	+		28004	14067	13865	13922	32141	32141					0.06080961954558006
RFIFLVTLW	9	Unmodified	_RFIFLVTLW_					0	0	0			REV__ENSG00000165474|ENST00000382848|GJB2	REV__ENSG00000165474|ENST00000382848|GJB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8575927615166	2	597.855327	1193.6961	2.2076	0.0013198	1.3949	0.00083395	3.6025	0.0021538	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.85019	1	31052	31052		0.52476	0	1	2856000	+		28005	9592	13866	13923	32142	32142					0.10700062541741318
RFIFLVTLW	9	Unmodified	_RFIFLVTLW_					0	0	0			REV__ENSG00000165474|ENST00000382848|GJB2	REV__ENSG00000165474|ENST00000382848|GJB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8582641482353	2	597.855327	1193.6961	2.7426	0.0016397	1.429	0.00085433	4.1716	0.002494	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.83213	1	31701	31701		2.0598	0	1	9838100	+		28006	9592	13866	13923	32143	32143					0.10700062541741318
RFIFLVTLW	9	Unmodified	_RFIFLVTLW_					0	0	0			REV__ENSG00000165474|ENST00000382848|GJB2	REV__ENSG00000165474|ENST00000382848|GJB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8572875857353	2	597.855327	1193.6961	1.4016	0.00083797	2.8258	0.0016894	4.2275	0.0025274	597.8570776506242	77.203	0.63533	78.954	78.655	79.29	1.7514					39	19	3	0	0	0	0.83213	1	32468	32468		2.0598	0	1	1929300	+		28007	9592	13866	13923	32144	32144					0.10700062541741318
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.3541137576103	2	517.353286	1032.69202	1.4607	0.00075569	0.099835	5.165E-05	1.5605	0.00080734	517.3533377521914	106.14	0.1615	106.14	106.05	106.21	0					21	7	4	0	0	0	0.89178	1	45212	45212		0.69038	0	1	99310000			28008	6273	13867	13924	32145	32145					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.3546630740166	2	517.353286	1032.69202	1.4607	0.0007557	-0.72106	-0.00037304	0.73964	0.00038266	517.3528297655936	107.66	0.20641	107.66	107.55	107.75	0					37	10	5	0	0	0	0.89178	1	46173	46173		0.69038	0	1	364960000			28009	6273	13867	13924	32146	32146					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.3546630740166	2	517.353286	1032.69202	2.9115	0.0015063	-1.8147	-0.00093886	1.0967	0.0005674	517.352236884443	106.1	0.1674	106.16	106.06	106.23	0.05455					20	7	4	0	0	0	0.88587	1	45121	45121		5.2307	2.6532	1	168930000			28010	6273	13867	13924	32147	32147					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.3552734255791	2	517.353286	1032.69202	2.9117	0.0015064	-1.7544	-0.00090763	1.1573	0.00059875	517.3523151831997	107.62	0.22569	107.67	107.56	107.79	0.052452					40	11	5	0	0	0	0.89178	1	46043	46043		0.69038	0	1	613010000			28011	6273	13867	13924	32148	32148					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3541137576103	2	517.353286	1032.69202	3.3591	0.0017379	-2.6833	-0.0013882	0.67589	0.00034967	517.3517335039329	106.08	0.25527	106.24	106.14	106.39	0.15781					39	13	4	0	0	0	0.88587	1	45307	45307		5.2307	2.6532	1	651360000			28012	6273	13867	13924	32149	32149					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3541747927666	2	517.353286	1032.69202	3.4012	0.0017596	-3.1868	-0.0016487	0.21436	0.0001109	517.3515147968008	106.05	0.27146	106.21	106.11	106.38	0.16174					45	14	5	0	0	0	0.88587	2	45231	45231;45305		5.2307	2.6532	1	702400000			28013	6273	13867	13924	32150;32151	32150					0.1769801783868843
RFKAKKKK	8	Unmodified	_RFKAKKKK_					0	0	0		ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	ENST00000393667.7_1_3:121412645-121412708:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3540527224541	2	517.353286	1032.69202	3.399	0.0017585	-3.5976	-0.0018613	-0.19869	-0.00010279	517.3513573606931	107.57	0.22544	107.73	107.6	107.83	0.15795					42	11	5	0	0	0	0.89178	1	46217	46217		0.69038	0	1	1403400000			28014	6273	13867	13924	32152	32152					0.1769801783868843
RFKEYLWRFLR	11	Unmodified	_RFKEYLWRFLR_					0	0	0			REV__ENSG00000167904|ENST00000434581|TMEM68	REV__ENSG00000167904|ENST00000434581|TMEM68	MSMS	GG20161007_CRH_Patient100_A02_02	2	807.4600097537041	2	807.456802	1612.89905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.741	1	66.068	65.568	66.568	0.32689								0	0	0	0.63775	1	27526	27526		0	0	1		+		28015	10885	13868	13925	32153	32153					0.11711760596199383
RFKKKKKA	8	Unmodified	_RFKKKKKA_					0	0	0		ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2393371462822	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.04	1	26.292	25.792	26.792	0.25197								0	0	0	1.0178	1	10877	10877		0.40072	0	1				28016	6118	13869	13926	32154	32154					0.17698017838711166
RFKKKKKA	8	Unmodified	_RFKKKKKA_					0	0	0		ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2388488650322	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.167	1	26.428	25.928	26.928	0.26173								0	0	0	1.0178	1	10932	10932		0.40072	0	1				28017	6118	13869	13926	32155	32155					0.17698017838711166
RFKKKKKA	8	Unmodified	_RFKKKKKA_					0	0	0		ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	ENST00000370544.9_1_1:87794674-87797922:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2378723025322	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.075	1	28.347	27.847	28.847	0.27119								0	0	0	1.0178	1	11742	11742		0.40072	0	1				28018	6118	13869	13926	32156	32156					0.17698017838711166
RFKKTKKG	8	Unmodified	_RFKKTKKG_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	331.7062560915947	3	331.550304	991.629084	1.1824	0.00039203	-2.6085	-0.00086484	-1.4261	-0.00047281	331.54919258640695	44.864	1.3031	45.19	44.901	46.204	0.32674					57	43	2	0	0	0	2.3239	1	19140	19140		0.45834	0.057624	1	791990			28019	7728	13870	13927	32157	32157					0.13293452050663745
RFKKTKKG	8	Unmodified	_RFKKTKKG_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|34|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	331.550304	991.629084	0.65387	0.00021679	-2.5728	-0.00085301	-1.9189	-0.00063622	331.54939879440394	43.532	1.005	44.886	44.529	45.533	1.3536	-0.15226	1.6834E-05	NaN	0.45834	41	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1425200			28020	7728	13870	13927							0.13293452050663745
RFLDDLGLKF	10	Unmodified	_RFLDDLGLKF_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3445312380791	2	612.342781	1222.67101	2.2833	0.0013981	0.096415	5.9039E-05	2.3797	0.0014572	612.3427921835348	65.623	1.3437	67.022	66.788	68.131	1.3989					114	43	4	0	0	0	0.04677	6	27626	27485;27534;27586;27626;27710;27844		135.72	81.886	1	26519000			28021	673	13871	13928	32158;32159;32160;32161;32162;32163	32161					0.06857962948492968
RFLDDLGLKF	10	Unmodified	_RFLDDLGLKF_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5651733279228	3	408.564279	1222.67101	2.1315	0.00087084	0.060887	2.4876E-05	2.1924	0.00089572	408.5643058225436	65.651	1.3749	67.05	66.788	68.163	1.3989					105	44	5	0	0	0	0.050638	5	27535	27488;27535;27587;27634;27791		78.61	63.362	1	24728000			28022	673	13871	13928	32164;32165;32166;32167;32168	32165					0.06857962948492968
RFLDDLGLKF	10	Unmodified	_RFLDDLGLKF_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3440429568291	2	612.342781	1222.67101	1.746	0.0010692	0.6956	0.00042594	2.4416	0.0014951	612.3431267777854	65.264	1.2625	67.172	66.907	68.169	1.9085					110	40	4	0	0	0	0.051813	7	27306	27306;27350;27389;27429;27475;27567;27686		121.5	71.949	1	29870000			28023	673	13871	13928	32169;32170;32171;32172;32173;32174;32175	32169					0.06857962948492968
RFLDDLGLKF	10	Unmodified	_RFLDDLGLKF_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5651122927666	3	408.564279	1222.67101	1.7169	0.00070148	0.44018	0.00017984	2.1571	0.00088133	408.56448673264725	65.218	0.92062	67.126	66.907	67.828	1.9085					84	29	4	0	0	0	0.043834	4	27405	27316;27364;27405;27446		94.801	79.062	1	17906000			28024	673	13871	13928	32176;32177;32178;32179	32178					0.06857962948492968
RFLDFITNI	9	Unmodified	_RFLDFITNI_					0	0	0		nc|ENSG00000166908|Q8TBX8-2|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C;ENSG00000166908|ENST00000354947|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8175536990166	2	569.816399	1137.61824	2.5177	0.0014346	-0.41679	-0.00023749	2.1009	0.0011971	569.8161799866592	77.87	0.54527	79.151	78.95	79.495	1.2809					47	17	4	0	0	0	0.02878	3	32696	32647;32696;32756		89.401	22.944	1	11203000			28025	3933	13872	13929	32180;32181;32182	32181					0.054940048857361035
RFLDFITNI	9	Unmodified	_RFLDFITNI_					0	0	0		nc|ENSG00000166908|Q8TBX8-2|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C;ENSG00000166908|ENST00000354947|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8170043826103	2	569.816399	1137.61824	1.1945	0.00068067	0.86213	0.00049125	2.0567	0.0011719	569.8167720090174	77.416	0.46426	79.168	78.915	79.379	1.7514					43	14	4	0	0	0	0.0006934	3	32450	32404;32450;32505		134.3	38.185	1	6614700			28026	3933	13872	13929	32183;32184;32185	32184					0.054940048857361035
RFLEIHVV	8	Unmodified	_RFLEIHVV_					0	0	0			REV__ENSG00000166033|ENST00000368984|HTRA1	REV__ENSG00000166033|ENST00000368984|HTRA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.0191528201103	3	338.202793	1011.58655	0.54148	0.00018313	0.79359	0.00026839	1.3351	0.00045152	338.5379220326682	28.66	0.33774	28.94	28.737	29.075	0.2793					17	10	2	0	0	0	2.3239	1	11999	11999		0.45834	0	1	500670	+		28027	10808	13873	13930	32186	32186					0.0812205692243424
RFLKQFRR	8	Unmodified	_RFLKQFRR_					0	0	0			REV__ENST00000479859.1_1_2:24199858-24199963:+|nuORF	REV__ENST00000479859.1_1_2:24199858-24199963:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	384.2361328005791	3	384.23672	1149.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.52	103.02	104.02	0.16445								0	0	0	1.0178	1	43555	43555		0.40072	0	1		+		28028	13106	13874	13931	32187	32187					0.1194734806483666
RFLLLSIGPVP	11	Unmodified	_RFLLLSIGPVP_					0	0	0		ENST00000476232.6_2_1:177993543-178000734:-|nuORF	ENST00000476232.6_2_1:177993543-178000734:-|nuORF	ENST00000476232.6_2_1:177993543-178000734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.6935302615166	4	303.693221	1210.74378	-0.11669	-3.5439E-05	1.2728	0.00038653	1.1561	0.00035109	303.6935871462227	23.863	0.81911	25.547	24.934	25.753	1.6845					94	26	4	0	0	0	1.0362	1	9823	9823		1.3296	0	1	3746200			28029	6785	13875	13932	32188	32188					0.14683716741956232
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.9131652712822	3	456.578811	1366.7146	0.64409	0.00029408	-0.095435	-4.3574E-05	0.54866	0.00025051	456.5787276312983	57.678	0.49617	59.097	58.879	59.375	1.4181					54	34	2	0	0	0	0.03361	3	24145	24145;24184;24222		76.416	60.142	1	23173000			28030	5338	13876	13933	32189;32190;32191	32189					0.04591572445656311
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	684.3659545779228	2	684.364579	1366.7146	0.10319	7.0621E-05	-0.0086901	-5.9472E-06	0.094502	6.4674E-05	684.3645738020516	57.675	0.23617	59.093	58.973	59.209	1.4181					40	20	3	0	0	0	0.092727	2	24150	24150;24188		78.06	54.04	1	13997000			28031	5338	13876	13933	32192;32193	32192					0.04591572445656311
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.5789672732353	3	456.578811	1366.7146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.901	1	59.319	58.819	59.819	1.4181								0	0	0	0.00017282	1	24277	24277		68.76	55.241	1				28032	5338	13876	13933	32194	32194					0.04591572445656311
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.5785400271416	3	456.578811	1366.7146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.057	1	59.475	58.975	59.975	1.4181								0	0	0	0.453	1	24341	24341		28.181	20.704	1				28033	5338	13876	13933	32195	32195					0.04591572445656311
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.5793029665947	3	456.578811	1366.7146	0.85562	0.00039066	-0.57378	-0.00026198	0.28184	0.00012868	456.578536199897	57.083	0.51751	59.052	58.782	59.3	1.9684					64	28	3	0	0	0	0.026793	4	23928	23884;23928;23972;24010		89.609	63.611	1	13955000			28034	5338	13876	13933	32196;32197;32198;32199	32197					0.04591572445656311
RFLNDPGHLLW	11	Unmodified	_RFLNDPGHLLW_					0	0	0		ENST00000498414.5_1_6:30314081-30314584:+|nuORF;ENST00000473266.1_1_6:30313175-30314584:+|nuORF;nc|ENSG00000241370|Q9H633-3|RPP21;ENSG00000241370|ENST00000442966|RPP21;nc|ENSG00000241370|Q9H633-4|RPP21;nc|ENSG00000241370|Q9H633-2|RPP21	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	ENST00000498414.5_1_6:30314081-30314584:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	684.3647949099541	2	684.364579	1366.7146	0.10065	6.8884E-05	0.21114	0.0001445	0.31179	0.00021338	684.8660911242923	57.087	0.48629	59.056	58.814	59.3	1.9684					45	27	2	0	0	0	0.037842	3	23939	23896;23939;23976		87.258	57.418	1	14507000			28035	5338	13876	13933	32200;32201;32202	32201					0.04591572445656311
RFLPHGQLLF	10	Unmodified	_RFLPHGQLLF_					0	0	0		ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.9061767458916	3	409.904747	1226.69241	1.2758	0.00052295	0.045112	1.8492E-05	1.3209	0.00054144	409.90538978455146	48.923	0.65259	50.311	50.079	50.731	1.388					36	20	2	0	0	0	0.83992	1	20478	20478		7.9454	3.7559	1	1389300			28036	2283	13877	13934	32203	32203					0.08813392767888217
RFLPHGQLLF	10	Unmodified	_RFLPHGQLLF_					0	0	0		ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.9048644900322	3	409.904747	1226.69241	2.2409	0.00091857	-0.67262	-0.00027571	1.5683	0.00064286	410.2382810441094	47.998	0.36911	49.975	49.775	50.144	1.9772					17	11	2	0	0	0	0.83529	1	20127	20127		8.4443	3.5473	1	981060			28037	2283	13877	13934	32204	32204					0.08813392767888217
RFLPHGQLLF	10	Unmodified	_RFLPHGQLLF_					0	0	0		ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	ENSG00000125843|ENST00000615891|AP5S1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.9055053591728	3	409.904747	1226.69241	1.9799	0.00081157	-1.958	-0.00080259	0.021908	8.9801E-06	409.9046730411958	48.421	0.73965	50.398	50.114	50.854	1.9772					43	23	2	0	0	0	0.77494	2	20271	20193;20271		14.957	10.06	1	877160			28038	2283	13877	13934	32205;32206	32206					0.08813392767888217
RFLQVQSMMY	10	Unmodified	_RFLQVQSMMY_					0	0	0		ENSG00000134516|ENST00000520908|DOCK2;ENST00000522138.1_1_5:169064330-169108764:+|nuORF;DOCK2|p.P175Lfs*53|1|0.3|ENSG00000134516|chr5:169681795-169681795|C/-|frameshift_variant	ENSG00000134516|ENST00000520908|DOCK2	ENSG00000134516|ENST00000520908|DOCK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8826171755791	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.90291	1	1.0499	0.54994	1.5499	0.14703								0	0	0	0.66254	1	371	371		0.15932	0	1				28039	2620	13878	13935	32207	32207					-0.012699271806695833
RFLRHTLKRFL	11	Unmodified	_RFLRHTLKRFL_					0	0	0			REV__ENSG00000099937|ENST00000215727|SERPIND1	REV__ENSG00000099937|ENST00000215727|SERPIND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	743.9611083865166	2	743.959512	1485.90447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.902	1	87.145	86.645	87.645	0.24387								0	0	0	0.63775	1	36403	36403		0.30703	0	1		+		28040	8958	13879	13936	32208	32208					0.18095484178661536
RFLRKYREKYC	11	Unmodified	_RFLRKYREKYC_					0	0	0		nc|ENSG00000082212|P23368-2|ME2;ENSG00000082212|ENST00000321341|ME2	nc|ENSG00000082212|P23368-2|ME2	nc|ENSG00000082212|P23368-2|ME2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1562.100634753704	1	1561.84201	1560.83474	0.13147	0.00020534	-2.9117	-0.0045476	-2.7802	-0.0043422	1562.8379611554003	57.945	0.075352	59.363	59.328	59.403	1.4181					6	4	2	0	0	0	0.14606	1	24288	24288		0.35063	0.043601	1	7226100			28041	1029	13880	13937	32209	32209					0.07675237447779182
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_01	1	524.9746581912041	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.266	1	25.266	24.766	25.766	0								0	0	0	0.63775	1	10544	10544		0.08335	0	1				28042	15996	13881	13938	32210	32210					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_01	1	524.9785644412041	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.511	1	25.511	25.011	26.011	0								0	0	0	0.63775	1	10647	10647		0.08335	0	1				28043	15996	13881	13938	32211	32211					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_01	1	524.9755126833916	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.719	1	26.719	26.219	27.219	0								0	0	0	0.63775	1	11165	11165		0.08335	0	1				28044	15996	13881	13938	32212	32212					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9767944216728	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.028	1	23.261	22.761	23.761	0.23306								0	0	0	0.63775	1	9605	9605		0.08335	0	1				28045	15996	13881	13938	32213	32213					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9763061404228	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.6	1	24.843	24.343	25.343	0.24251								0	0	0	0.63775	1	10268	10268		0.08335	0	1				28046	15996	13881	13938	32214	32214					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9770385622978	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.727	1	24.969	24.469	25.469	0.24251								0	0	0	0.63775	1	10321	10321		0.08335	0	1				28047	15996	13881	13938	32215	32215					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9763061404228	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.335	1	25.587	25.087	26.087	0.25197								0	0	0	0.63775	1	10578	10578		0.08335	0	1				28048	15996	13881	13938	32216	32216					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9758178591728	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.76	1	26.012	25.512	26.512	0.25197								0	0	0	0.63775	1	10757	10757		0.08335	0	1				28049	15996	13881	13938	32217	32217					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9758178591728	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.579	1	45.908	45.408	46.408	0.32899								0	0	0	0.63775	1	19134	19134		0.08335	0	1				28050	15996	13881	13938	32218	32218					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9764892458916	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.253	1	47.583	47.083	48.083	0.33034								0	0	0	0.63775	1	19821	19821		0.08335	0	1				28051	15996	13881	13938	32219	32219					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_W632_01	3	524.9758178591728	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.964	1	24.178	23.678	24.678	1.2145								0	0	0	0.63775	1	9597	9597		0.08335	0	1				28052	15996	13881	13938	32220	32220					0.13910448493584227
RFLWQRRQRAR	11	Unmodified	_RFLWQRRQRAR_					0	0	0		sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	sp|P16778|VGLI_HCMVAUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL37PE=1SV=2	MSMS	GG20161007_CRH_Patient100_W632_02	4	524.9748412966728	3	524.97467	1571.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.483	1	26.168	25.668	26.668	1.6845								0	0	0	0.63775	1	10227	10227		0.08335	0	1				28053	15996	13881	13938	32221	32221					0.13910448493584227
RFPLLRWRRR	10	Unmodified	_RFPLLRWRRR_					0	0	0			REV__ENST00000371646.9_1_6:44214858-44216493:+|nuORF	REV__ENST00000371646.9_1_6:44214858-44216493:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9660217165947	3	485.968856	1454.88474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.214	1	15.327	14.827	15.827	0.11295								0	0	0	0.66254	1	6315	6315		0.15932	0.01943	1		+		28054	12673	13882	13939	32222	32222					0.17549152958576997
RFQEKFFIF	9	Unmodified	_RFQEKFFIF_					0	0	0		nc|ENSG00000078043|O75928-3|PIAS2;ENST00000592011.5_1_18:44416318-44500057:-|nuORF;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2;ENSG00000078043|ENST00000585916|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.2300903201103	3	421.229119	1260.66553	3.0105	0.0012681	0.2508	0.00010564	3.2613	0.0013737	421.2293104369331	61.135	0.99103	62.555	62.281	63.272	1.4196					100	31	4	0	0	0	0.093705	5	25679	25575;25626;25679;25734;25788		51.415	20.984	1	15733000			28055	969	13883	13940	32223;32224;32225;32226;32227	32225					0.04562284156691021
RFQEKFFIF	9	Unmodified	_RFQEKFFIF_					0	0	0		nc|ENSG00000078043|O75928-3|PIAS2;ENST00000592011.5_1_18:44416318-44500057:-|nuORF;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2;ENSG00000078043|ENST00000585916|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.3425170779228	2	631.340041	1260.66553	2.8148	0.0017771	0.34251	0.00021624	3.1573	0.0019933	631.340111129444	61.13	0.8009	62.549	62.314	63.115	1.4196					77	25	4	0	0	0	0.062093	4	25629	25581;25629;25683;25737		78.728	38.279	1	9181800			28056	969	13883	13940	32228;32229;32230;32231	32229					0.04562284156691021
RFQEKFFIF	9	Unmodified	_RFQEKFFIF_					0	0	0		nc|ENSG00000078043|O75928-3|PIAS2;ENST00000592011.5_1_18:44416318-44500057:-|nuORF;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2;ENSG00000078043|ENST00000585916|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2307311892509	3	421.229119	1260.66553	3.2189	0.0013559	-0.42165	-0.00017761	2.7972	0.0011783	421.2289858456011	60.566	1.3086	62.531	62.23	63.538	1.9653					125	41	4	0	0	0	0.16434	8	25467	25333;25376;25415;25467;25521;25574;25630;25731		37.075	14.138	1	16440000			28057	969	13883	13940	32232;32233;32234;32235;32236;32237;32238;32239	32235					0.04562284156691021
RFQEKFFIF	9	Unmodified	_RFQEKFFIF_					0	0	0		nc|ENSG00000078043|O75928-3|PIAS2;ENST00000592011.5_1_18:44416318-44500057:-|nuORF;ENST00000590127.5_1_18:44407908-44497416:-|nuORF;nc|ENSG00000078043|O75928-2|PIAS2;ENSG00000078043|ENST00000585916|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	nc|ENSG00000078043|O75928-3|PIAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.3420898318291	2	631.340041	1260.66553	2.7847	0.0017581	0.38573	0.00024353	3.1704	0.0020016	631.3401839034962	60.566	0.89621	62.531	62.26	63.157	1.9653					81	28	4	0	0	0	0.13191	3	25390	25343;25390;25502		51.63	19.513	1	6902100			28058	969	13883	13940	32240;32241;32242	32241					0.04562284156691021
RFQHQAFRREF	11	Unmodified	_RFQHQAFRREF_					0	0	0		ENST00000523612.1_1_8:142469282-142469963:+|nuORF	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	ENST00000523612.1_1_8:142469282-142469963:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	761.7390624880791	2	761.394733	1520.77491	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.89	1	115.04	114.54	115.54	0.14976								0	0	0	0.63775	1	49696	49696		2.4985	1.169	1				28059	7103	13884	13941	32243	32243					0.03535682828737663
RFRELDPN	8	Unmodified	_RFRELDPN_					0	0	0		tr|A0A553SLB3|A0A553SLB3_NIACISulfurtransferaseOS=NialliacirculansOX=1397GN=CEQ21_20325PE=4SV=1	tr|A0A553SLB3|A0A553SLB3_NIACISulfurtransferaseOS=NialliacirculansOX=1397GN=CEQ21_20325PE=4SV=1	tr|A0A553SLB3|A0A553SLB3_NIACISulfurtransferaseOS=NialliacirculansOX=1397GN=CEQ21_20325PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.2928954958916	2	523.772522	1045.53049	2.7831	0.0014577	3.7316	0.0019545	6.5147	0.0034122	524.2754280900098	73.633	0.33972	75.43	75.132	75.471	1.7962					16	10	2	0	0	0	2.3239	1	30903	30903		16.942	0	1	2600700			28060	16329	13885	13942	32244	32244					0.009548040149411463
RFRWRRRLLVI	11	Unmodified	_RFRWRRRLLVI_					0	0	0		ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	MSMS	GG20161007_CRH_Patient100_W632_01	3	785.9988281130791	2	785.999503	1569.98445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.67	1	102.84	102.34	103.34	0.16445								0	0	0	0.63775	1	43240	43240		0.30703	0.30703	1				28061	1156	13886	13943	32245	32245					0.2222597057252642
RFSLLRHRI	9	Unmodified	_RFSLLRHRI_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1197.734423816204	1	1197.73272	1196.72544	2.5644	0.0030715	-1.7474	-0.0020929	0.81703	0.00097858	1197.730602429794	107.43	0.15408	107.59	107.49	107.64	0.15795					23	7	4	0	0	0	0.85068	1	46144	46144		0.45834	0.057624	1	36583000			28062	8010	13887	13944	32246	32246					0.13495019610604686
RFSLLRHRI	9	Unmodified	_RFSLLRHRI_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1197.73272	1196.72544	1.3526	0.0016201	-1.7831	-0.0021357	-0.43049	-0.00051561	1197.7298656646865	107.48	0.11742	107.48	107.41	107.53	0	-0.070857	9.3836E-05	NaN	0.45834	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2667000			28063	8010	13887	13944							0.13495019610604686
RFSLLRHRI	9	Unmodified	_RFSLLRHRI_					0	0	0		nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	nc|ENSG00000254838|Q7Z2Y8|GVINP1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1197.73272	1196.72544	2.7561	0.0033011	-1.9911	-0.0023848	0.76508	0.00091636	1197.7305439633658	107.43	0.15218	107.59	107.51	107.66	0.15781	0.034968	-0.00015524	NaN	0.45834	23	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39838000			28064	8010	13887	13944							0.13495019610604686
RFSPPLRLF	9	Unmodified	_RFSPPLRLF_					0	0	0		ENST00000371953.7_1_10:89623465-89623600:+|nuORF	ENST00000371953.7_1_10:89623465-89623600:+|nuORF	ENST00000371953.7_1_10:89623465-89623600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.8367187380791	2	566.834926	1131.6553	1.7737	0.0010054	1.8197	0.0010315	3.5934	0.0020369	566.8367574893849	54.33	0.55731	55.735	55.438	55.995	1.4048					41	17	3	0	0	0	0.18337	3	22745	22693;22745;22800		34.932	16.797	1	2087900			28065	6133	13888	13945	32247;32248;32249	32248					0.09473721222116183
RFSPPLRLF	9	Unmodified	_RFSPPLRLF_					0	0	0		ENST00000371953.7_1_10:89623465-89623600:+|nuORF	ENST00000371953.7_1_10:89623465-89623600:+|nuORF	ENST00000371953.7_1_10:89623465-89623600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.8353759646416	2	566.834926	1131.6553	1.1947	0.00067718	-0.13777	-7.8092E-05	1.0569	0.00059909	566.8354194136971	53.735	0.5623	55.705	55.44	56.003	1.9697					36	17	3	0	0	0	0.13623	2	22545	22496;22545		40.239	11.258	1	2151300			28066	6133	13888	13945	32250;32251	32251					0.09473721222116183
RFTMELAK	8	Oxidation (M)	_RFTM(Oxidation (M))ELAK_		RFTM(1)ELAK		RFTM(48)ELAK	0	0	1		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2681457400322	2	506.268227	1010.5219	0.72254	0.0003658	-0.52054	-0.00026353	0.202	0.00010227	506.26801068504176	13.831	0.33743	13.831	13.671	14.009	0					29	10	4	0	0	0	0.50132	1	5742	5742		47.594	11.467	1	4413700			28067	3217	13889	13946	32252	32252		58			0.01706114054104546
RFTMELAK	8	Unmodified	_RFTMELAK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.2715331912041	2	498.27077	994.526987	0.79459	0.00039592	0.37476	0.00018673	1.1694	0.00058265	498.2711301937192	23.842	0.49299	23.842	23.625	24.118	0					38	15	4	0	0	0	0.20025	3	9949	9904;9949;9993		80.676	21.997	1	3947000			28068	3217	13889	13947	32253;32254;32255	32254					0.02950417916713377
RFTMELAK	8	Unmodified	_RFTMELAK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.2713500857353	2	498.27077	994.526987	1.3941	0.00069466	0.2076	0.00010344	1.6017	0.0007981	498.270728382809	23.64	0.31239	23.876	23.724	24.037	0.23626					16	9	2	0	0	0	0.72752	1	9849	9849		27.629	2.2295	1	777100			28069	3217	13889	13947	32256	32256					0.02950417916713377
RFTMELAK	8	Unmodified	_RFTMELAK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	498.27077	994.526987	1.3941	0.00069466	0.2076	0.00010344	1.6017	0.0007981	498.270728382809	23.64	0.31239	23.876	23.724	24.037	0.23626	0.049218	-0.00033432	NaN	80.676	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	777100			28070	3217	13889	13947							0.02950417916713377
RFTMELAK	8	Unmodified	_RFTMELAK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	498.27077	994.526987	1.1296	0.00056283	0.90069	0.00044879	2.0303	0.0010116	498.2712115343634	22.599	0.21629	23.813	23.673	23.889	1.2145	-0.014066	0.00035637	NaN	80.676	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	509130			28071	3217	13889	13947							0.02950417916713377
RFTMELAK	8	Unmodified	_RFTMELAK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	498.27077	994.526987	0.37934	0.00018901	1.054	0.0005252	1.4334	0.00071421	498.27125379400354	22.162	0.1879	23.777	23.674	23.862	1.6158	-0.049832	0.00050919	NaN	80.676	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366330			28072	3217	13889	13947							0.02950417916713377
RFVKKKGK	8	Unmodified	_RFVKKKGK_					0	0	0			REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.8911620974541	3	330.89055	989.649819	0.11784	3.8991E-05	2.74	0.00090663	2.8578	0.00094562	330.8916113465679	24.919	0.6565	26.179	25.719	26.376	1.2594					39	21	2	0	0	0	0.89178	1	10440	10440		0.40072	0	1	1090300	+		28073	13872	13890	13948	32257	32257					0.15458042430327623
RFVKKKGK	8	Unmodified	_RFVKKKGK_					0	0	0			REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	330.89055	989.649819	0.32532	0.00010765	2.5171	0.00083288	2.8424	0.00094053	330.89165867264575	26.16	0.81281	26.421	26.083	26.896	0.26173	0.12128	-0.00012021	NaN	0.40072	42	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	957020	+		28074	13872	13890	13948							0.15458042430327623
RFVKKKGK	8	Unmodified	_RFVKKKGK_					0	0	0			REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	REV__ENST00000556641.5_1_14:99959014-99967243:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	330.89055	989.649819	0.11784	3.8991E-05	2.74	0.00090663	2.8578	0.00094562	330.8916113465679	24.919	0.6565	26.179	25.719	26.376	1.2594	-0.12128	0.00010104	NaN	0.40072	39	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1090300	+		28075	13872	13890	13948							0.15458042430327623
RFVNVVPTF	9	Unmodified	_RFVNVVPTF_					0	0	0		ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3082153201103	2	539.805834	1077.59712	1.1787	0.00063624	0.12959	6.9955E-05	1.3082	0.0007062	539.8058769424505	55.53	0.28885	56.94	56.732	57.02	1.4099					18	9	3	0	0	0	0.20909	1	23265	23265		41.84	12.758	1	2243600			28076	3252	13891	13949	32258	32258					0.06142039576843672
RFVNVVPTF	9	Unmodified	_RFVNVVPTF_					0	0	0		ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	ENSG00000149806|ENST00000529639|FAU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8057739138603	2	539.805834	1077.59712	0.5943	0.00032081	1.9224	0.0010377	2.5167	0.0013585	540.308589503466	55.067	0.32002	57.036	56.809	57.129	1.9684					23	10	3	0	0	0	0.42097	1	23110	23110		26.884	8.7487	1	2549400			28077	3252	13891	13949	32259	32259					0.06142039576843672
RFYHSNYSL	9	Unmodified	_RFYHSNYSL_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.7866088747978	2	593.78563	1185.55671	2.1266	0.0012627	-0.27369	-0.00016251	1.8529	0.0011002	593.7854608227688	74.954	1.8684	74.954	74.173	76.041	0					128	58	3	0	0	0	0.79362	1	31318	31318		3.5965	0.31518	1	1620400	+		28078	9049	13892	13950	32260	32260					-0.028649268135723105
RFYRRQIRNWP	11	Unmodified	_RFYRRQIRNWP_					0	0	0			REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2980224490166	3	531.295409	1590.8644	2.1016	0.0011166	3.462	0.0018394	5.5637	0.002956	531.2973363307549	42.85	0.35882	44.771	44.57	44.929	1.9211					36	11	4	0	0	0	1.0191	1	17962	17962		2.6312	0.19645	1	4754900	+		28079	9034	13893	13951	32261	32261					0.0925993750811358
RFYRRQIRNWP	11	Unmodified	_RFYRRQIRNWP_					0	0	0			REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	531.295409	1590.8644	1.9094	0.0010144	2.2531	0.0011971	4.1625	0.0022115	531.2967280745108	43.487	0.33343	44.841	44.677	45.01	1.3536	0.034671	-0.00071679	NaN	2.6312	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5456400	+		28080	9034	13893	13951							0.0925993750811358
RFYRRQIRNWP	11	Unmodified	_RFYRRQIRNWP_					0	0	0			REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	REV__ENST00000487362.1_1_20:36640605-36642218:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	531.295409	1590.8644	2.1016	0.0011166	3.462	0.0018394	5.5637	0.002956	531.2973363307549	42.85	0.35882	44.771	44.57	44.929	1.9211	-0.034671	0.0012101	NaN	2.6312	36	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4754900	+		28081	9034	13893	13951							0.0925993750811358
RGAFMIPMC	9	Unmodified	_RGAFMIPMC_					0	0	0			REV__tr|A0A553SMJ6|A0A553SMJ6_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22745PE=4SV=1	REV__tr|A0A553SMJ6|A0A553SMJ6_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22745PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2389404177666	2	513.240101	1024.46565	2.2174	0.0011381	-1.2444	-0.00063868	0.97302	0.00049939	513.2395605709538	92.787	0.69932	92.787	92.502	93.202	0					113	22	7	0	0	0	0.82604	1	38931	38931		2.3027	0	1	30501000	+		28082	15022	13894	13952	32262	32262					-0.045605533785533225
RGARGKAP	8	Unmodified	_RGARGKAP_					0	0	0			REV__ENST00000510666.1_1_5:68840710-68849495:+|nuORF	REV__ENST00000510666.1_1_5:68840710-68849495:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.7473022341728	2	406.746111	811.477669	1.9394	0.00078885	0.02478	1.0079E-05	1.9642	0.00079893	406.74612130892785	78.277	0.57201	78.586	78.323	78.895	0.30933					42	17	3	0	0	0	0.89178	1	32803	32803		0.69038	0	1	5891600	+		28083	11692	13895	13953	32263	32263					0.06438890742799686
RGARRALLP	9	Unmodified	_RGARRALLP_					0	0	0		ENST00000373232.7_1_10:71990148-71993132:-|nuORF	ENST00000373232.7_1_10:71990148-71993132:-|nuORF	ENST00000373232.7_1_10:71990148-71993132:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1009.63927000761	1	1009.63776	1008.63048	1.6409	0.0016567	-2.5514	-0.002576	-0.91049	-0.00091927	1009.6336126806359	71.189	0.38	71.189	70.972	71.352	0					18	11	2	0	0	0	0.77526	1	29707	29707		4.3292	0	1	729350			28084	6158	13896	13954	32264	32264					0.12651086139408108
RGARVITP	8	Unmodified	_RGARVITP_					0	0	0		ENSG00000196284|ENST00000371459|SUPT3H;nc|ENSG00000196284|O75486-4|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2696411013603	2	435.269419	868.524284	1.8415	0.00080156	1.3801	0.0006007	3.2216	0.0014023	435.26979786539005	84.259	0.46458	84.259	83.966	84.43	0					29	14	3	0	0	0	0.88663	1	35145	35145		4.756	0	1	2772800			28085	4931	13897	13955	32265	32265					0.08476330574092117
RGARVITP	8	Unmodified	_RGARVITP_					0	0	0		ENSG00000196284|ENST00000371459|SUPT3H;nc|ENSG00000196284|O75486-4|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	435.269419	868.524284	2.8491	0.0012401	0.72588	0.00031595	3.5749	0.0015561	435.26967923758156	84.045	0.43355	84.306	84.067	84.501	0.26083	-0.0575	0.00020804	NaN	4.756	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1803100			28086	4931	13897	13955							0.08476330574092117
RGDSVIVVL	9	Unmodified	_RGDSVIVVL_					0	0	0		nc|ENSG00000125743|P62316-2|SNRPD2;ENSG00000125743|ENST00000342669|SNRPD2	nc|ENSG00000125743|P62316-2|SNRPD2	nc|ENSG00000125743|P62316-2|SNRPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2912475466728	2	479.290017	956.565481	1.6915	0.0008107	0.39827	0.00019089	2.0897	0.0010016	479.29027731132265	46.164	0.40881	47.539	47.334	47.743	1.3751					35	12	4	0	0	0	0.20244	2	19328	19328;19381		32.786	3.7041	1	7559400			28087	2275	13898	13956	32266;32267	32266					0.08546046822914377
RGGAGRKP	8	Unmodified	_RGGAGRKP_					0	0	0			REV__ENST00000556552.1_1_14:94594803-94595124:-|nuORF	REV__ENST00000556552.1_1_14:94594803-94595124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7396728396416	2	399.738286	797.462019	1.8209	0.0007279	-0.564	-0.00022545	1.2569	0.00050245	399.73811130518754	67.593	0.90329	67.916	67.218	68.121	0.32269					51	29	3	0	0	0	0.89051	1	28213	28213		2.3027	0	1	4823200	+		28088	13870	13899	13957	32268	32268					0.05518604225744639
RGGAGRKP	8	Unmodified	_RGGAGRKP_					0	0	0			REV__ENST00000556552.1_1_14:94594803-94595124:-|nuORF	REV__ENST00000556552.1_1_14:94594803-94595124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7390930056572	2	399.738286	797.462019	1.5825	0.00063259	-0.37043	-0.00014807	1.2121	0.00048451	399.738355195234	66.216	0.83221	68.105	67.509	68.341	1.8889					55	26	3	0	0	0	0.89051	1	27841	27841		2.3027	0	1	4282600	+		28089	13870	13899	13957	32269	32269					0.05518604225744639
RGGGCGGGG	9	Unmodified	_RGGGCGGGG_					0	0	0		ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.2828857302666	1	677.278383	676.271106	1.461	0.00098953	0.87535	0.00059286	2.3364	0.0015824	677.2828807083151	103.94	0.095139	103.94	103.88	103.97	0					16	4	4	0	0	0	0.85403	1	43772	43772		0	0	1	31974000			28090	6369	13900	13958	32270	32270					-0.07997845147826865
RGGGCGGGG	9	Unmodified	_RGGGCGGGG_					0	0	0		ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	677.278383	676.271106	2.8806	0.001951	0.72934	0.00049397	3.61	0.002445	677.2808517941899	103.86	0.076233	104.02	103.97	104.05	0.16055	0.04262	-0.001903	NaN	0	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13066000			28091	6369	13900	13958							-0.07997845147826865
RGGGCGGGG	9	Unmodified	_RGGGCGGGG_					0	0	0		ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	ENST00000407595.2_1_2:56411641-56419673:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	677.278383	676.271106	2.8438	0.001926	0.79447	0.00053808	3.6383	0.0024641	677.2812891459029	103.81	0.098419	103.98	103.93	104.03	0.1731	0.0036779	-0.0018588	NaN	0	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11935000			28092	6369	13900	13958							-0.07997845147826865
RGGGSKTSP	9	Unmodified	_RGGGSKTSP_					0	0	0			REV__ENSG00000178404|ENST00000322630|CEP295NL	REV__ENSG00000178404|ENST00000322630|CEP295NL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	846.4424926638603	1	846.442806	845.435529	1.2152	0.0010286	-1.5864	-0.0013428	-0.37123	-0.00031422	846.4413050375641	104.84	0.10899	104.84	104.77	104.88	0					24	5	5	0	0	0	0.7849	1	44328	44328		3.9444	1.6417	1	1783899999.9999998	+		28093	11246	13901	13959	32271	32271					0.006628705437492499
RGGGSKTSP	9	Unmodified	_RGGGSKTSP_					0	0	0			REV__ENSG00000178404|ENST00000322630|CEP295NL	REV__ENSG00000178404|ENST00000322630|CEP295NL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	846.442806	845.435529	1.2152	0.0010286	-1.5864	-0.0013428	-0.37123	-0.00031422	846.4413050375641	104.84	0.10899	104.84	104.77	104.88	0	-0.043769	0.00065483	NaN	3.9444	24	5	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1783899999.9999998	+		28094	11246	13901	13959							0.006628705437492499
RGGIKLTT	8	Unmodified	_RGGIKLTT_					0	0	0			REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	845.5227538943291	1	845.520328	844.513051	2.7817	0.002352	-0.048202	-4.0756E-05	2.7335	0.0023112	845.5200336088992	107.85	0.21571	107.9	107.77	107.99	0.052452					33	11	4	0	0	0	0.89198	2	46197	46197;46272		0	0	1	419420000	+		28095	12653	13902	13960	32272;32273	32272					0.08457508479921216
RGGIKLTT	8	Unmodified	_RGGIKLTT_					0	0	0			REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	845.5226318240166	1	845.520328	844.513051	2.9354	0.0024819	-0.55068	-0.00046561	2.3847	0.0020163	845.5195902045632	107.81	0.17696	107.96	107.86	108.04	0.15781					30	9	4	0	0	0	0.89198	1	46429	46429		0	0	1	468090000	+		28096	12653	13902	13960	32274	32274					0.08457508479921216
RGGIKLTT	8	Unmodified	_RGGIKLTT_					0	0	0			REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	REV__ENST00000369836.8_1_1:110198802-110199018:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	845.5225097537041	1	845.520328	844.513051	3.0495	0.0025784	-1.0367	-0.00087655	2.0128	0.0017018	845.5190583044375	107.78	0.20206	107.94	107.83	108.03	0.15795					30	10	4	0	0	0	0.89198	2	46370	46370;46448		0	0	1	350630000	+		28097	12653	13902	13960	32275;32276	32275					0.08457508479921216
RGGKPGAR	8	Unmodified	_RGGKPGAR_					0	0	0		ENST00000527223.6_2_19:55670954-55672526:-|nuORF;ENST00000455045.5_1_19:55670954-55672526:-|nuORF	ENST00000527223.6_2_19:55670954-55672526:-|nuORF	ENST00000527223.6_2_19:55670954-55672526:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7394592165947	2	399.738286	797.462019	0.12441	4.9732E-05	1.3997	0.0005595	1.5241	0.00060923	399.73916879368096	67.742	0.684	67.742	67.231	67.915	0					50	21	3	0	0	0	0.89051	1	28179	28179		2.3027	0	1	5696600			28098	6640	13903	13961	32277	32277					0.055186042257560075
RGGKPGAR	8	Unmodified	_RGGKPGAR_					0	0	0		ENST00000527223.6_2_19:55670954-55672526:-|nuORF;ENST00000455045.5_1_19:55670954-55672526:-|nuORF	ENST00000527223.6_2_19:55670954-55672526:-|nuORF	ENST00000527223.6_2_19:55670954-55672526:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7395812869072	2	399.738286	797.462019	1.4665	0.00058622	0.13014	5.2023E-05	1.5967	0.00063824	399.73848943590565	66.526	0.88463	67.915	67.299	68.184	1.3888					59	28	3	0	0	0	0.89051	1	27841	27841		2.3027	0	1	4450800			28099	6640	13903	13961	32278	32278					0.055186042257560075
RGGWGLGG	8	Unmodified	_RGGWGLGG_					0	0	0			REV__ENSG00000188766|ENST00000691638|SPRED3	REV__ENSG00000188766|ENST00000691638|SPRED3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	759.3917724490166	1	759.389648	758.382371	1.3415	0.0010188	0.92772	0.0007045	2.2693	0.0017233	759.3907985042872	108.5	0.25655	108.5	108.36	108.62	0					29	11	3	0	0	0	0.89178	1	46741	46741		0.69038	0	1	134160000	+		28100	11585	13904	13962	32279	32279					-0.0064846244822547305
RGILLTYF	8	Unmodified	_RGILLTYF_					0	0	0			REV__nc|ENSG00000142731|O00444-3|PLK4	REV__nc|ENSG00000142731|O00444-3|PLK4	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1941711306572	3	328.195527	981.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.193	1	34.193	33.693	34.693	0								0	0	0	1.0178	1	14331	14331		1.6526	0	1		+		28101	10190	13905	13963	32280	32280					0.07323252173853234
RGIQLHKMIR	10	Unmodified	_RGIQLHKMIR_					0	0	0		ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	ENSG00000114480|ENST00000429644|GBE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9204894900322	3	417.920403	1250.73938	0.73514	0.00030723	0.8535	0.00035669	1.5886	0.00066392	417.92072332307174	28.679	0.72291	30.478	30.236	30.959	1.7987					68	23	4	0	0	0	0.85604	1	11946	11946		3.3196	0.82116	1	5086900			28102	1866	13906	13964	32281	32281					0.1240392904737746
RGIWVLLLPV	10	Unmodified	_RGIWVLLLPV_					0	0	0		ENST00000564160.1_1_16:2722719-2722887:-|nuORF;ENST00000474706.6_1_16:2588592-2588760:+|nuORF	ENST00000564160.1_1_16:2722719-2722887:-|nuORF	ENST00000564160.1_1_16:2722719-2722887:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2546569705009	3	389.253376	1164.7383	0.45457	0.00017694	1.7895	0.00069655	2.244	0.00087349	389.2543169535766	27.578	0.46328	28.857	28.565	29.029	1.2789					71	14	6	0	0	0	0.89588	1	11495	11495		1.9064	0	1	118660000			28103	6775	13907	13965	32282	32282					0.16252037950107479
RGKAIKPP	8	Unmodified	_RGKAIKPP_					0	0	0			REV__ENST00000494614.5_1_3:98520348-98531278:-|nuORF	REV__ENST00000494614.5_1_3:98520348-98531278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.7811157107353	2	433.782162	865.549771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.133	1	36.951	36.451	37.451	1.8176								0	0	0	1.0178	1	14732	14732		2.3027	1.6124	1		+		28104	8641	13908	13966	32283	32283					0.11161805096503485
RGKRKHRAEK	10	Unmodified	_RGKRKHRAEK_					0	0	0		ENST00000261942.6_1_5:175934391-175934511:+|nuORF	ENST00000261942.6_1_5:175934391-175934511:+|nuORF	ENST00000261942.6_1_5:175934391-175934511:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1959716677666	4	317.196994	1264.75887	-2.4472	-0.00077625	-1.1123	-0.00035283	-3.5595	-0.0011291	317.19654149507863	36.285	0.88987	36.285	36.142	37.032	0					123	64	3	0	0	0	0.8974	1	15456	15456		1.7423	0.41263	1	37022000			28105	5628	13909	13967	32284	32284					0.13708021382490188
RGLKDYLNSLL	11	Unmodified	_RGLKDYLNSLL_					0	0	0			REV__ENSG00000117408|ENST00000372343|IPO13	REV__ENSG00000117408|ENST00000372343|IPO13	MSMS	GG20161007_CRH_Patient100_A02_02	2	646.4389526247978	2	646.372069	1290.72959	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.62	1	104.67	104.17	105.17	0.056801								0	0	0	0.63775	1	44159	44159		1.1933	0.66858	1		+		28106	9500	13910	13968	32285	32285					0.09585019522978655
RGLLQPPTL	9	Unmodified	_RGLLQPPTL_					0	0	0			REV__chr3:183844326-183884722|124|22.43|0.4|5.8|-|1|PARL,PARL|1	REV__chr3:183844326-183884722|124|22.43|0.4|5.8|-|1|PARL,PARL|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2072326540947	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.796	1	85.056	84.556	85.556	0.26083								0	0	0	0.42693	1	35458	35458		1.0715	0	1		+		28107	8316	13911	13969	32286	32286					0.10006039576853709
RGLRGFFL	8	Unmodified	_RGLRGFFL_					0	0	0		ENST00000317613.10_1_9:116303752-116304061:+|nuORF	ENST00000317613.10_1_9:116303752-116304061:+|nuORF	ENST00000317613.10_1_9:116303752-116304061:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2883788943291	2	483.287611	964.56067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.077	1	84.265	83.765	84.765	1.1879								0	0	0	1.0178	1	34873	34873		2.8892	0	1				28108	5834	13912	13970	32287	32287					0.07697207470812373
RGLVGYRGT	9	Unmodified	_RGLVGYRGT_					0	0	0		ENST00000507944.5_1_3:98241389-98241692:-|nuORF	ENST00000507944.5_1_3:98241389-98241692:-|nuORF	ENST00000507944.5_1_3:98241389-98241692:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7768127322197	2	489.777608	977.540663	0.99813	0.00048886	-1.0616	-0.00051995	-0.06347	-3.1086E-05	489.77719530165393	20.931	0.20621	22.056	21.955	22.162	1.1254					10	6	2	0	0	0	0.59203	1	8736	8736		11.64	0.81637	1	843850			28109	7013	13913	13971	32288	32288					0.05099411740195592
RGLVGYRGT	9	Unmodified	_RGLVGYRGT_					0	0	0		ENST00000507944.5_1_3:98241389-98241692:-|nuORF	ENST00000507944.5_1_3:98241389-98241692:-|nuORF	ENST00000507944.5_1_3:98241389-98241692:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7776977419853	2	489.777608	977.540663	0.50594	0.0002478	-1.2387	-0.0006067	-0.73278	-0.0003589	489.77716167176624	20.529	0.21055	22.103	21.969	22.18	1.5748					11	6	2	0	0	0	0.59203	1	8537	8537		11.64	2.2929	1	815270			28110	7013	13913	13971	32289	32289					0.05099411740195592
RGMKRRLN	8	Unmodified	_RGMKRRLN_					0	0	0		ENST00000423209.5_1_1:46512277-46527688:-|nuORF	ENST00000423209.5_1_1:46512277-46527688:-|nuORF	ENST00000423209.5_1_1:46512277-46527688:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2086974978447	3	344.206543	1029.5978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.313	1	94.313	93.813	94.813	0								0	0	0	1.0178	1	39413	39413		0.40072	0	1				28111	6457	13914	13972	32290	32290					0.08418555744924561
RGNRYSET	8	Unmodified	_RGNRYSET_					0	0	0			REV__ENST00000428826.6_1_17:40854213-40854450:-|nuORF	REV__ENST00000428826.6_1_17:40854213-40854450:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1604797244072	3	328.161545	981.462806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6818	1	6.4125	5.9125	6.9125	0.73074								0	0	0	1.0178	1	2356	2356		0.40072	0	1		+		28112	13012	13915	13973	32291	32291					-0.028666459158671387
RGNRYSET	8	Unmodified	_RGNRYSET_					0	0	0			REV__ENST00000428826.6_1_17:40854213-40854450:-|nuORF	REV__ENST00000428826.6_1_17:40854213-40854450:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1608154177666	3	328.161545	981.462806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0604	1	6.7912	6.2912	7.2912	0.73074								0	0	0	1.0178	1	2514	2514		0.40072	0	1		+		28113	13012	13915	13973	32292	32292					-0.028666459158671387
RGPAIVVI	8	Unmodified	_RGPAIVVI_					0	0	0			REV__ENSG00000138375|ENST00000357276|SMARCAL1	REV__ENSG00000138375|ENST00000357276|SMARCAL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	824.5386230349541	1	824.535249	823.527973	1.247	0.0010282	3.3677	0.0027768	4.6147	0.003805	824.5378658220496	109.51	0.30004	109.51	109.37	109.67	0					36	12	4	0	0	0	0.89176	1	47370	47370		0.79363	0	1	37189000	+		28114	10058	13916	13974	32293	32293					0.10915000347961268
RGPKGPAC	8	Unmodified	_RGPKGPAC_					0	0	0			REV__ENST00000320934.7_1_11:117100369-117100402:-|nuORF	REV__ENST00000320934.7_1_11:117100369-117100402:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2072936892509	2	393.207973	784.401392	0.85518	0.00033626	-1.9808	-0.00077887	-1.1256	-0.00044261	393.20703599597357	24.457	0.48177	24.7	24.474	24.956	0.24251					26	15	2	0	0	0	0.89198	1	10191	10191		0	0	1	798880	+		28115	12404	13917	13975	32294	32294					0.0005675085114944523
RGPRRARRP	9	Unmodified	_RGPRRARRP_					0	0	0		chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5673705935478	3	374.567351	1120.68023	1.5728	0.0005891	-2.9195	-0.0010936	-1.3467	-0.00050445	374.5662708928669	52.268	0.60994	52.593	52.343	52.953	0.32554					36	19	2	0	0	0	0.82654	1	21935	21935		2.2828	0.5405	1	1590300			28116	201	13918	13976	32295	32295					0.12471213868070663
RGPRRARRP	9	Unmodified	_RGPRRARRP_					0	0	0		chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	chr14:105478360-105479436|391|93.51|0.21|8.82|+|2|CRIP2,CRIP2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.9009277224541	3	374.567351	1120.68023	-0.12092	-4.5294E-05	-1.8739	-0.00070189	-1.9948	-0.00074719	374.5667229313945	51.045	0.64162	52.439	52.226	52.868	1.3938					32	20	2	0	0	0	0.76103	2	21376	21376;21438		4.897	2.0304	1	1476600			28117	201	13918	13976	32296;32297	32296					0.12471213868070663
RGQRHQRS	8	Unmodified	_RGQRHQRS_					0	0	0		ENST00000291825.11_2_19:40904515-40914122:-|nuORF;ENST00000324001.7_2_19:40903812-40914122:-|nuORF	ENST00000291825.11_2_19:40904515-40914122:-|nuORF	ENST00000291825.11_2_19:40904515-40914122:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	342.1903869509697	3	342.188429	1023.54346	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.862	1	20.31	19.81	20.81	1.448								0	0	0	1.0178	1	7842	7842		1.6526	0	1				28118	5724	13919	13977	32298	32298					0.03262679917702371
RGRADAAAR	9	Unmodified	_RGRADAAAR_					0	0	0			REV__ENST00000573450.5_1_16:4390322-4391533:-|nuORF	REV__ENST00000573450.5_1_16:4390322-4391533:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.2317077517509	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2238	1	3.9701	3.4701	4.4701	0.74638								0	0	0	0.42693	1	1337	1337		0	0	1		+		28119	11872	13920	13978	32299	32299					0.03720472794827856
RGRAEEWH	8	Unmodified	_RGRAEEWH_					0	0	0		ENSG00000170604|ENST00000302165|IRF2BP1	ENSG00000170604|ENST00000302165|IRF2BP1	ENSG00000170604|ENST00000302165|IRF2BP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.7575561404228	2	520.754664	1039.49478	2.2162	0.0011541	1.9994	0.0010412	4.2156	0.0021953	520.7555125761	81.37	0.48544	81.661	81.4	81.885	0.29056					29	15	2	0	0	0	0.89008	1	33974	33974		2.5775	0.27475	1	12368000			28120	4153	13921	13979	32300	32300					-0.023392334420577754
RGRARLNLFRH	11	Unmodified	_RGRARLNLFRH_					0	0	0		nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2;ENSG00000172432|ENST00000307126|GTPBP2;GTPBP2-VEGFA|1|fusion;ENST00000480263.1_1_6:43593048-43593564:-|nuORF	nc|ENSG00000172432|Q9BX10-2|GTPBP2	nc|ENSG00000172432|Q9BX10-2|GTPBP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	698.4139892458916	2	698.41326	1394.81197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.83	1	106	105.5	106.5	0.16679								0	0	0	0.63775	1	45114	45114		0.30703	0	1				28121	4236	13922	13980	32301	32301					0.13035399165119088
RGRCMTTTL	9	Unmodified	_RGRCMTTTL_					0	0	0			REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.7634765505791	2	519.762786	1037.51102	2.736	0.0014221	-3.7958	-0.0019729	-1.0598	-0.00055086	519.7604548593118	78.142	0.42174	79.422	79.259	79.68	1.2809					25	13	2	0	0	0	0.59203	1	32873	32873		11.64	0	1	2586400	+		28122	12587	13923	13981	32302	32302					-0.0062361159182273695
RGRCMTTTL	9	Unmodified	_RGRCMTTTL_					0	0	0			REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	519.762786	1037.51102	2.0256	0.0010528	-1.5266	-0.00079349	0.49893	0.00025932	519.7613548663551	79.725	0.43287	79.725	79.515	79.948	0	0.22046	0.00083768	NaN	11.64	31	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2153900	+		28123	12587	13923	13981							-0.0062361159182273695
RGRCMTTTL	9	Unmodified	_RGRCMTTTL_					0	0	0			REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	519.762786	1037.51102	2.736	0.0014221	-3.7958	-0.0019729	-1.0598	-0.00055086	519.7604548593118	78.142	0.42174	79.422	79.259	79.68	1.2809	-0.081784	-0.0015212	NaN	11.64	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2586400	+		28124	12587	13923	13981							-0.0062361159182273695
RGRCMTTTL	9	Unmodified	_RGRCMTTTL_					0	0	0			REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	REV__ENST00000359568.9_1_21:47836721-47838169:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.762786	1037.51102	1.4128	0.00073431	-4.6277	-0.0024053	-3.2149	-0.001671	519.7595728263109	77.7	0.39077	79.452	79.231	79.622	1.7514	-0.052409	-0.0023859	NaN	11.64	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3266100	+		28125	12587	13923	13981							-0.0062361159182273695
RGRGRDSPP	9	Unmodified	_RGRGRDSPP_					0	0	0		ENST00000267101.7_1_12:56473655-56474027:+|nuORF	ENST00000267101.7_1_12:56473655-56474027:+|nuORF	ENST00000267101.7_1_12:56473655-56474027:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	333.1814453005791	3	333.181051	996.521324	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.177	1	94.918	94.418	95.418	0.74124								0	0	0	0.42693	1	39627	39627		1.0715	0	1				28126	5659	13924	13982	32303	32303					0.022924554492647076
RGRKRRRRCFR	11	Unmodified	_RGRKRRRRCFR_					0	0	0		ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	ENST00000257626.11_2_7:77035403-77045687:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	516.8127929568291	3	516.311399	1545.91237	2.8177	0.0014548	-2.2137	-0.001143	0.60399	0.00031185	516.3110887519191	92.253	1.782	92.443	91.755	93.537	0.19042					115	55	3	0	0	0	0.14606	1	38435	38435		0.40827	0.31342	1	1476400			28127	5604	13925	13983	32304	32304					0.1612473294717347
RGRKSRSLLP	10	Unmodified	_RGRKSRSLLP_					0	0	0			REV__ENST00000381869.5_3_8:17658110-17658311:-|nuORF	REV__ENST00000381869.5_3_8:17658110-17658311:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3661987185478	2	585.364913	1168.71527	2.6526	0.0015527	-1.0598	-0.00062039	1.5927	0.00093233	585.3645363556774	85.732	0.93567	85.732	85.196	86.132	0					46	29	2	0	0	0	0.89803	1	35680	35680		1.4819	0	1	1086000	+		28128	12780	13926	13984	32305	32305					0.1376641188535359
RGRLVRSIAPL	11	Unmodified	_RGRLVRSIAPL_					0	0	0			REV__ENST00000546500.5_1_12:54674031-54674238:+|nuORF	REV__ENST00000546500.5_1_12:54674031-54674238:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2661620974541	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.143	1	27.412	26.912	27.912	1.2699								0	0	0	0.63775	1	10948	10948		0.50596	0	1		+		28129	13807	13927	13985	32306	32306					0.16895557953557727
RGRPKKLA	8	Unmodified	_RGRPKKLA_					0	0	0		chr6:34243518-34243616|327|34.22|0.69|5.63|+|0|HMGA1,None|1	chr6:34243518-34243616|327|34.22|0.69|5.63|+|0|HMGA1,None|1	chr6:34243518-34243616|327|34.22|0.69|5.63|+|0|HMGA1,None|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	309.2064697146416	3	309.206649	924.598118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.68	1	103.74	103.24	104.24	0.059502								0	0	0	1.0178	1	43545	43545		0	0	1				28130	273	13928	13986	32307	32307					0.1328029873640162
RGRPLRRRVG	10	Unmodified	_RGRPLRRRVG_					0	0	0			REV__ENST00000227507.2_1_11:69467885-69468137:+|nuORF	REV__ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0395995974541	4	306.448349	1221.76429	-2.884	-0.0008838	-0.40413	-0.00012385	-3.2882	-0.0010076	306.6986728162841	26.724	0.17687	26.724	26.627	26.804	0					6	5	2	0	0	0	0.12561	1	11127	11127		0	0	1	103380	+		28131	12093	13929	13987	32308	32308					0.16227744964930935
RGRQLCAPP	9	Unmodified	_RGRQLCAPP_					0	0	0		ENSG00000172724|ENST00000311925|CCL19	ENSG00000172724|ENST00000311925|CCL19	ENSG00000172724|ENST00000311925|CCL19	MSMS	GG20161007_CRH_Patient100_A02_01	1	333.1828491091728	3	333.183516	996.528718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.181	1	95.181	94.681	95.681	0								0	0	0	0.42693	1	39777	39777		1.0715	0	1				28132	4248	13930	13988	32309	32309					0.03031471725330448
RGRRHRLQYR	10	Unmodified	_RGRRHRLQYR_					0	0	0		ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	ENSG00000105278|ENST00000262961|ZFR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.6087829470634	3	466.608098	1396.80247	2.8575	0.0013333	0.48628	0.0002269	3.3438	0.0015602	466.60804134969914	85.084	1.703	85.084	84.399	86.103	0					87	53	2	0	0	0	0.89803	1	35762	35762		0.13989	0	1	1342500			28133	1506	13931	13989	32310	32310					0.11993630879624106
RGRRILLPPR	10	Unmodified	_RGRRILLPPR_					0	0	0			REV__nc|ENSG00000133083|O15075-3|DCLK1	REV__nc|ENSG00000133083|O15075-3|DCLK1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.2276183962822	4	309.205825	1232.79419	-2.0586	-0.00063653	2.3156	0.00071601	0.25706	7.9483E-05	309.2063613868036	64.226	0.3809	64.226	63.952	64.333	0					17	11	3	0	0	0	0.12561	1	26687	26687		0	0	1	438950	+		28134	14434	13932	13990	32311	32311					0.18710683910308035
RGRRPRRIV	9	Unmodified	_RGRRPRRIV_					0	0	0			REV__nc|ENSG00000139220|O75334-7|PPFIA2	REV__nc|ENSG00000139220|O75334-7|PPFIA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2544433474541	3	389.254885	1164.74283	-0.47894	-0.00018643	-1.0975	-0.00042722	-1.5765	-0.00061365	389.25453835100774	31.932	0.43805	31.932	31.756	32.194	0					64	13	6	0	0	0	0.85206	1	13404	13404		0.26902	0	1	99495000	+		28135	10099	13933	13991	32312	32312					0.16704359936261426
RGRRRPLP	8	Unmodified	_RGRRRPLP_					0	0	0		ENST00000319070.2_1_16:681311-683059:+|nuORF	ENST00000319070.2_1_16:681311-683059:+|nuORF	ENST00000319070.2_1_16:681311-683059:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.3216430544853	2	504.320309	1006.62606	2.7117	0.0013676	-0.59635	-0.00030075	2.1154	0.0010668	504.32006229664813	73.442	0.69125	73.767	73.605	74.296	0.32494					45	21	3	0	0	0	0.89008	1	30749	30749		2.5775	0	1	1512500			28136	5838	13934	13992	32313	32313					0.12301621716494537
RGRRRRKKT	9	Unmodified	_RGRRRRKKT_					0	0	0			REV__ENSG00000219481|ENST00000430580|NBPF1	REV__ENSG00000219481|ENST00000430580|NBPF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3977538943291	2	607.39487	1212.77519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.14	1	104.3	103.8	104.8	0.16055								0	0	0	0.42693	1	44061	44061		0.45834	0.057624	1		+		28137	11873	13935	13993	32314	32314					0.17731147339259223
RGRRRTVPRG	10	Unmodified	_RGRRRTVPRG_					0	0	0		ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.8845397830009	4	303.439252	1209.7279	-2.2834	-0.00069287	2.2911	0.00069522	0.0077247	2.344E-06	303.6909744885099	41.369	0.70337	41.369	40.891	41.594	0					35	21	2	0	0	0	0.12559	1	17326	17326		0.77653	0	1	405230			28138	7097	13936	13994	32315	32315					0.13142868068257485
RGRVLPIGGL	10	Unmodified	_RGRVLPIGGL_					0	0	0		tr|A0A553SKA6|A0A553SKA6_NIACILonproteaseOS=NialliacirculansOX=1397GN=lonPE=2SV=1	tr|A0A553SKA6|A0A553SKA6_NIACILonproteaseOS=NialliacirculansOX=1397GN=lonPE=2SV=1	tr|A0A553SKA6|A0A553SKA6_NIACILonproteaseOS=NialliacirculansOX=1397GN=lonPE=2SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5596801638603	3	346.557459	1036.65055	2.5962	0.00089973	3.1838	0.0011034	5.78	0.0020031	346.55886142392546	62.323	1.3536	64.28	63.938	65.292	1.9571					61	32	3	0	0	0	0.89588	1	26139	26139		1.9064	0.83491	1	1890000			28139	16281	13937	13995	32316	32316					0.1336883707938341
RGSGCGAC	8	Unmodified	_RGSGCGAC_					0	0	0			REV__ENST00000394361.8_1_16:57596005-57608989:+|nuORF	REV__ENST00000394361.8_1_16:57596005-57608989:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0698425173759	2	355.639065	709.263578	-2.068	-0.00073546	-2.7224	-0.0009682	-4.7904	-0.0017037	355.63815939275094	17.878	0.37145	17.878	17.686	18.057	0					16	11	2	0	0	0	2.3239	1	7396	7396		0	0	1	289840	+		28140	12827	13938	13996	32317	32317					-0.10268320739783121
RGSILVVVVPT	11	Unmodified	_RGSILVVVVPT_					0	0	0			REV__tr|A0A553SRE7|A0A553SRE7_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_00775PE=4SV=1	REV__tr|A0A553SRE7|A0A553SRE7_NIACIbeta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_00775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3620483279228	2	570.360973	1138.70739	1.8502	0.0010553	-2.4413	-0.0013924	-0.59109	-0.00033713	570.3598847343421	80.689	0.59126	80.98	80.84	81.431	0.29056					42	18	3	0	0	0	1.0366	1	33782	33782		1.1933	0	1	1648900	+		28141	15158	13939	13997	32318	32318					0.14358839845226612
RGSRPPLPAR	10	Unmodified	_RGSRPPLPAR_					0	0	0		ENST00000340850.9_1_1:6550548-6550623:-|nuORF	ENST00000340850.9_1_1:6550548-6550623:-|nuORF	ENST00000340850.9_1_1:6550548-6550623:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8309814333916	2	553.830706	1105.64686	2.4367	0.0013495	-0.9516	-0.00052702	1.4851	0.00082248	553.8300287508691	73.86	1.3555	74.185	73.912	75.267	0.32494					102	42	3	0	0	0	0.89803	1	31248	31248		1.1933	0.39971	1	2448400			28142	5931	13940	13998	32319	32319					0.09826167305504896
RGSRRPGR	8	Unmodified	_RGSRRPGR_					0	0	0		nc|ENSG00000168397|Q9Y4P1-2|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	nc|ENSG00000168397|Q9Y4P1-2|ATG4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2820312380791	2	471.278641	940.542729	2.3389	0.0011023	3.285	0.0015481	5.6239	0.0026504	471.28034591700657	75.986	1.1523	75.986	75.471	76.623	0					58	36	3	0	0	0	0.8909	1	31576	31576		2.0598	0	1	1465200			28143	7921	13941	13999	32320	32320					0.0700788526866063
RGSSEHGTA	9	Unmodified	_RGSSEHGTA_					0	0	0		ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411620974541	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3091	1	8.9456	8.4456	9.4456	0.63651								0	0	0	0.42693	1	3444	3444		0.26902	0	1				28144	7534	13942	14000	32321	32321					-0.04922907841284996
RGSSEHGTA	9	Unmodified	_RGSSEHGTA_					0	0	0		ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	ENST00000600059.5_1_19:48988799-49002658:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413757205009	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.098	1	66.026	65.526	66.526	1.928								0	0	0	0.42693	1	26893	26893		0.96228	0	1				28145	7534	13942	14000	32322	32322					-0.04922907841284996
RGVAALAL	8	Unmodified	_RGVAALAL_					0	0	0			REV__SLC9C2|p.L284R|1|0.2|ENSG00000162753|chr1:173576712-173576712|A/C|missense_variant	REV__SLC9C2|p.L284R|1|0.2|ENSG00000162753|chr1:173576712-173576712|A/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1542541384697	2	385.747788	769.481023	-0.71273	-0.00027494	-3.3116	-0.0012774	-4.0243	-0.0015524	385.7450945854413	101.57	0.12225	101.57	101.5	101.62	0					5	3	2	0	0	0	2.3239	1	42523	42523		0	0	1	1749100	+		28146	14628	13943	14001	32323	32323					0.08706140796778072
RGVAALAL	8	Unmodified	_RGVAALAL_					0	0	0			REV__SLC9C2|p.L284R|1|0.2|ENSG00000162753|chr1:173576712-173576712|A/C|missense_variant	REV__SLC9C2|p.L284R|1|0.2|ENSG00000162753|chr1:173576712-173576712|A/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	385.747788	769.481023	3.0231	0.0011662	-7.8759	-0.0030381	-4.8528	-0.0018719	385.74463779187255	101.34	0.093353	101.53	101.46	101.56	0.19076	-0.022679	-0.00092272	NaN	0	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	281600	+		28147	14628	13943	14001							0.08706140796778072
RGVRKVRPN	9	Unmodified	_RGVRKVRPN_					0	0	0			REV__ENST00000570101.5_1_16:58700792-58701185:-|nuORF	REV__ENST00000570101.5_1_16:58700792-58701185:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3391601443291	2	541.338698	1080.66284	1.7852	0.00096641	-0.79659	-0.00043123	0.98864	0.00053519	541.3381543684688	80.993	1.0405	80.993	80.572	81.613	0					56	33	3	0	0	0	0.85019	1	33772	33772		0.52476	0	1	2232100	+		28148	13960	13944	14002	32324	32324					0.12573873542419278
RGVVLLLFLAL	11	Unmodified	_RGVVLLLFLAL_					0	0	0		ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1	ENSG00000015520|ENST00000381160|NPC1L1	ENSG00000015520|ENST00000381160|NPC1L1	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2743713259697	3	405.272548	1212.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.833	1	32.124	31.624	32.624	0.29086								0	0	0	0.63775	1	13362	13362		0.45452	0.1855	1				28149	600	13945	14003	32325	32325					0.19792880155728199
RGVVLLLFLAL	11	Unmodified	_RGVVLLLFLAL_					0	0	0		ENSG00000015520|ENST00000381160|NPC1L1;nc|ENSG00000015520|Q9UHC9-2|NPC1L1;nc|ENSG00000015520|Q9UHC9|NPC1L1	ENSG00000015520|ENST00000381160|NPC1L1	ENSG00000015520|ENST00000381160|NPC1L1	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2733642458916	3	405.272548	1212.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.794	1	33.089	32.589	33.589	0.29431								0	0	0	0.63775	1	13767	13767		0.45452	0.21867	1				28150	600	13945	14003	32326	32326					0.19792880155728199
RHAMGIHV	8	Unmodified	_RHAMGIHV_					0	0	0			REV__tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	REV__tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	460.2946349978447	2	460.747796	919.481039	2.025	0.00093299	-1.5682	-0.00072254	0.45675	0.00021045	460.7478972554385	74.473	0.51154	74.473	74.141	74.653	0					36	15	3	0	0	0	2.3239	1	31038	31038		0.79363	0	1	876360	+		28151	15035	13946	14004	32327	32327					0.018078175251503126
RHAMGIHV	8	Unmodified	_RHAMGIHV_					0	0	0			REV__tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	REV__tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	460.747796	919.481039	3.0127	0.0013881	-1.7134	-0.00078943	1.2993	0.00059866	460.7473315819253	73.772	0.48062	74.097	73.816	74.296	0.32494	-0.18796	-6.514E-05	NaN	0.79363	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1268900	+		28152	15035	13946	14004							0.018078175251503126
RHCQDEHDN	9	Unmodified	_RHCQDEHDN_					0	0	0		ENST00000444273.6_1_6:56954967-57015704:+|nuORF;nc|ENSG00000112200|Q9Y4E5-2|ZNF451;ENSG00000112200|ENST00000370706|ZNF451	ENST00000444273.6_1_6:56954967-57015704:+|nuORF	ENST00000444273.6_1_6:56954967-57015704:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1531555056572	3	385.152832	1152.43667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.302	1	98.558	98.058	99.058	0.25636								0	0	0	0.42693	1	41365	41365		0.26902	0	1				28153	1772	13947	14005	32328	32328					-0.13345283149647003
RHHGRVPRQRV	11	Unmodified	_RHHGRVPRQRV_					0	0	0			REV__KIAA2026|p.V108Rfs*104|1|0.31|ENSG00000183354|chr9:6007467-6007468|-/C|frameshift_variant	REV__KIAA2026|p.V108Rfs*104|1|0.31|ENSG00000183354|chr9:6007467-6007468|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.6090576052666	3	466.608098	1396.80247	3.4232	0.0015973	-1.3188	-0.00061535	2.1044	0.00098195	466.60771991351885	97.607	0.094261	97.698	97.62	97.715	0.090881					4	2	2	0	0	0	1.0362	1	40847	40847		0.45452	0	1	2331200	+		28154	14241	13948	14006	32329	32329					0.11993630879601369
RHHIQLAG	8	Unmodified	_RHHIQLAG_					0	0	0			REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	REV__TRPV2|p.E582Gfs*74|1|0.57|ENSG00000187688|chr17:16432052-16432053|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	466.2659789919853	2	466.264668	930.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.352	1	97.442	96.942	97.942	0.090881								0	0	0	1.0178	1	40735	40735		2.5775	0	1		+		28155	15926	13949	14007	32330	32330					0.04674562288573725
RHIPLKKLI	9	Unmodified	_RHIPLKKLI_					0	0	0			REV__CNBD1|p.I427Ffs*4|1|0.04|ENSG00000176571|chr8:87353759-87353760|-/CTTT|frameshift_variant	REV__CNBD1|p.I427Ffs*4|1|0.04|ENSG00000176571|chr8:87353759-87353760|-/CTTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3829833865166	2	559.382043	1116.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.89	1	107.05	106.55	107.55	0.16174								0	0	0	0.42693	1	45806	45806		0	0	1		+		28156	8363	13950	14008	32331	32331					0.19582860044283734
RHIQQFMRRYW	11	Unmodified	_RHIQQFMRRYW_					0	0	0			REV__ENST00000523402.5_1_8:22411983-22419017:+|nuORF	REV__ENST00000523402.5_1_8:22411983-22419017:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	810.8628417849541	2	810.920061	1619.82557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.76	1	102.92	102.42	103.42	0.16445								0	0	0	0.63775	1	43283	43283		2.7352	2.3846	1		+		28157	9581	13951	14009	32332	32332					0.040448888820947104
RHKHRRLLHLL	11	Unmodified	_RHKHRRLLHLL_					0	0	0			REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	REV__ENST00000451963.1_2_7:99818153-99818871:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.6493408083916	3	493.647894	1477.92185	3.3368	0.0016472	0.76889	0.00037956	4.1057	0.0020268	493.6479271537647	97.395	0.12038	97.701	97.654	97.774	0.3062					5	3	2	0	0	0	1.0402	1	40979	40979		0.094841	0	1	7908100	+		28158	11837	13952	14010	32333	32333					0.20200824504354387
RHKIYLEVE	9	Unmodified	_RHKIYLEVE_					0	0	0		tr|A0A7D6VT41|A0A7D6VT41_9CLOTSporulationproteinYunBOS=ClostridiumintestinaleOX=36845GN=yunBPE=4SV=1	tr|A0A7D6VT41|A0A7D6VT41_9CLOTSporulationproteinYunBOS=ClostridiumintestinaleOX=36845GN=yunBPE=4SV=1	tr|A0A7D6VT41|A0A7D6VT41_9CLOTSporulationproteinYunBOS=ClostridiumintestinaleOX=36845GN=yunBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2242309451103	3	396.224146	1185.65061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.478	1	87.714	87.214	88.214	0.2354								0	0	0	0.42693	1	36680	36680		1.1933	0.17977	1				28159	16897	13953	14011	32334	32334					0.06520792288688426
RHKKVREI	8	Unmodified	_RHKKVREI_					0	0	0			REV__tr|A0A7D7A4T4|A0A7D7A4T4_9CLOTAdenosylcobinamidekinaseOS=ClostridiumintestinaleOX=36845GN=cobUPE=3SV=1	REV__tr|A0A7D7A4T4|A0A7D7A4T4_9CLOTAdenosylcobinamidekinaseOS=ClostridiumintestinaleOX=36845GN=cobUPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0702392458916	3	355.892842	1064.6567	1.7639	0.00062777	-0.86765	-0.00030879	0.89628	0.00031898	355.8922190117033	77.116	0.12562	77.432	77.323	77.448	0.31653					5	3	2	0	0	0	2.3239	1	32230	32230		0.40072	0	1	108850	+		28160	15875	13954	14012	32335	32335					0.1269535531089332
RHKLIKGV	8	Unmodified	_RHKLIKGV_					0	0	0		ENSG00000107854|ENST00000371627|TNKS2;TNKS-KHDRBS3|1|fusion;ENSG00000173273|ENST00000310430|TNKS	ENSG00000107854|ENST00000371627|TNKS2	ENSG00000107854|ENST00000371627|TNKS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1985046267509	2	475.816536	949.618519	3.3914	0.0016137	0.75898	0.00036113	4.1503	0.0019748	475.8164949253502	103.25	0.13883	103.44	103.35	103.49	0.18066					7	4	2	0	0	0	2.3239	1	43464	43464		0.69038	0	1	685660			28161	1608	13955	14013	32336	32336					0.1416946939623358
RHKLRKKTKK	10	Unmodified	_RHKLRKKTKK_					0	0	0			REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9476806521416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.843	1	16.994	16.494	17.494	0.15093								0	0	0	0.6624	1	6989	6989		0.40072	0.050084	1		+		28162	10794	13956	14014	32337	32337					0.23019215007184357
RHKRRRRKQK	10	Unmodified	_RHKRRRRKQK_					0	0	0		ENST00000478247.1_1_3:183882805-183888540:+|nuORF;nc|ENSG00000161202|Q92997-2|DVL3;ENSG00000161202|ENST00000313143|DVL3	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9864990115166	4	362.986901	1447.9185	-1.0768	-0.00039088	-0.48776	-0.00017705	-1.5646	-0.00056793	362.9867618023066	36.01	0.74994	36.01	35.462	36.212	0					283	63	5	0	0	0	0.89803	2	15003	15003;15080		0.15932	0.01943	1	455320000			28163	3590	13957	14015	32338;32339	32338					0.21245574450313143
RHKRRRRKQK	10	Unmodified	_RHKRRRRKQK_					0	0	0		ENST00000478247.1_1_3:183882805-183888540:+|nuORF;nc|ENSG00000161202|Q92997-2|DVL3;ENSG00000161202|ENST00000313143|DVL3	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.6455261111259	3	483.646776	1447.9185	1.6288	0.00078779	-2.1911	-0.0010597	-0.56226	-0.00027193	483.64567167735856	36.021	0.21303	36.021	35.908	36.121	0					41	19	3	0	0	0	0.89803	1	15113	15113		0.13989	0.04505	1	20315000			28164	3590	13957	14015	32340	32340					0.21245574450313143
RHKYRVEK	8	Unmodified	_RHKYRVEK_					0	0	0		ENSG00000171773|ENST00000301944|NXNL1	ENSG00000171773|ENST00000301944|NXNL1	ENSG00000171773|ENST00000301944|NXNL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3276855349541	2	558.325257	1114.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.387	1	85.387	84.887	85.887	0								0	0	0	1.0178	1	35576	35576		2.0598	0.40713	1				28165	4206	13958	14016	32341	32341					0.08322764931222082
RHLHHQGR	8	Unmodified	_RHLHHQGR_					0	0	0			REV__ENST00000262520.10_1_16:30999269-30999425:+|nuORF	REV__ENST00000262520.10_1_16:30999269-30999425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.7863036990166	2	520.78409	1039.55363	2.9179	0.0015196	0.4552	0.00023706	3.3731	0.0017566	520.7848831875084	101.04	0.12484	101.11	101.03	101.15	0.067009					7	3	3	0	0	0	0.89176	1	42308	42308		0.79363	0	1	2951100	+		28166	12198	13959	14017	32342	32342					0.0354328764294678
RHLLHGWGEW	10	Unmodified	_RHLLHGWGEW_					0	0	0			REV__ENST00000366987.6_2_1:212792976-212793303:+|nuORF	REV__ENST00000366987.6_2_1:212792976-212793303:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882629275322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1734	1	8.2497	7.7497	8.7497	0.07632								0	0	0	0.66254	1	3383	3383		0.15932	0	1		+		28167	12617	13960	14018	32343	32343					0.00853863442898728
RHLLVFIVKR	10	Unmodified	_RHLLVFIVKR_					0	0	0		ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.9192993044853	2	640.919324	1279.8241	2.7186	0.0017424	-2.5638	-0.0016432	0.15488	9.9264E-05	640.9173457721992	105.89	0.15666	106.05	105.96	106.12	0.15859					27	7	5	0	0	0	0.89803	1	45200	45200		1.6526	0.17072	1	448450000			28168	6714	13961	14019	32344	32344					0.19537622855636982
RHLLVFIVKR	10	Unmodified	_RHLLVFIVKR_					0	0	0		ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	640.919324	1279.8241	1.5135	0.00097004	-1.3436	-0.00086116	0.16988	0.00010888	640.9176608273717	105.96	0.13455	105.96	105.89	106.03	0	-0.041811	0.0015212	NaN	1.6526	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	93274000			28169	6714	13961	14019							0.19537622855636982
RHLLVFIVKR	10	Unmodified	_RHLLVFIVKR_					0	0	0		ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	640.919324	1279.8241	2.6612	0.0017056	-2.3508	-0.0015066	0.31046	0.00019898	640.9169693680643	105.92	0.13867	105.97	105.9	106.04	0.05455	-0.034082	0.00023023	NaN	1.6526	17	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	72741000			28170	6714	13961	14019							0.19537622855636982
RHLLVFIVKR	10	Unmodified	_RHLLVFIVKR_					0	0	0		ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	ENST00000468090.5_1_21:45176041-45176113:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	640.919324	1279.8241	2.9826	0.0019116	-3.2767	-0.0021001	-0.29409	-0.00018849	640.9169421537679	105.87	0.16074	106.04	105.95	106.11	0.16679	0.034413	-0.00095667	NaN	1.6526	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	286630000			28171	6714	13961	14019							0.19537622855636982
RHLVRKKHI	9	Unmodified	_RHLVRKKHI_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2607910037041	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.195	1	97.286	96.786	97.786	0.090881								0	0	0	0.42693	1	40671	40671		0.26902	0	1		+		28172	9972	13962	14020	32345	32345					0.1716301236454001
RHLVRKKHI	9	Unmodified	_RHLVRKKHI_					0	0	0			REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	REV__ENST00000552973.1_1_13:52722507-52730359:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2606689333916	3	396.259636	1185.75708	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.734	1	93.06	92.56	93.56	1.3269								0	0	0	0.42693	1	38626	38626		0.26902	0	1		+		28173	9972	13962	14020	32346	32346					0.1716301236454001
RHLVTGNH	8	Unmodified	_RHLVTGNH_					0	0	0		ENST00000584403.5_1_17:62081411-62097970:-|nuORF	ENST00000584403.5_1_17:62081411-62097970:-|nuORF	ENST00000584403.5_1_17:62081411-62097970:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.2553893923759	2	467.2543	932.494047	3.4272	0.0016014	-1.1639	-0.00054383	2.2633	0.0010575	467.25355140425233	97.42	0.095795	97.511	97.463	97.559	0.090881					4	2	2	0	0	0	0.89008	1	40769	40769		2.5775	0	1	2710600			28174	7446	13963	14021	32347	32347					0.025099719088871097
RHPCLSFH	8	Unmodified	_RHPCLSFH_					0	0	0			REV__ENST00000312917.9_2_6:36259324-36262144:+|nuORF	REV__ENST00000312917.9_2_6:36259324-36262144:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.7440978884697	2	498.745254	995.475954	2.4652	0.0012295	-3.5799	-0.0017854	-1.1147	-0.00055594	498.74322938528815	77.933	0.42079	79.213	79.015	79.435	1.2809					26	13	2	0	0	0	0.89008	1	32727	32727		2.5775	0.27475	1	5527600	+		28175	12374	13964	14022	32348	32348					-0.0219648633747056
RHPEYAVS	8	Unmodified	_RHPEYAVS_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.7414733767509	2	479.740691	957.466829	0.71431	0.00034269	1.4539	0.0006975	2.1682	0.0010402	479.74091063227087	11.443	0.37054	11.443	11.325	11.696	0					21	11	3	0	0	0	0.8577	1	4745	4745		16.149	2.2431	1	1534500		+	28176	341	13965	14023	32349	32349					-0.013605564221506938
RHPEYAVSVL	10	Unmodified	_RHPEYAVSVL_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.8185302615166	2	585.81693	1169.61931	1.4078	0.00082469	0.87673	0.0005136	2.2845	0.0013383	585.817333350908	30.649	1.3776	30.649	30.347	31.725	0					114	44	4	0	0	0	0.18015	5	12820	12770;12820;12865;12918;12969		51.415	23.786	1	8448800		+	28177	341	13966	14024	32350;32351;32352;32353;32354	32351					0.04128219254607757
RHPEYAVSVL	10	Unmodified	_RHPEYAVSVL_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.8173095583916	2	585.81693	1169.61931	1.0231	0.00059934	1.1893	0.0006967	2.2124	0.001296	585.8171686699674	30.112	0.88273	30.398	30.204	31.087	0.2859					59	29	3	0	0	0	0.33708	3	12648	12597;12648;12699		37.075	14.338	1	3298300		+	28178	341	13966	14024	32355;32356;32357	32356					0.04128219254607757
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1963073611259	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.472	1	32.766	32.266	33.266	0.29431								0	0	0	1.0178	1	13629	13629		0	0	1		+		28179	13550	13967	14025	32358	32358					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1960021853447	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.562	1	32.856	32.356	33.356	0.29431								0	0	0	1.0178	1	13667	13667		0	0	1		+		28180	13550	13967	14025	32359	32359					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1964294314384	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.703	1	32.997	32.497	33.497	0.29431								0	0	0	1.0178	1	13727	13727		0	0	1		+		28181	13550	13967	14025	32360	32360					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1963073611259	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.342	1	37.647	37.147	38.147	0.30497								0	0	0	1.0178	1	15706	15706		0	0	1		+		28182	13550	13967	14025	32361	32361					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1968566775322	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.466	1	37.771	37.271	38.271	0.30497								0	0	0	1.0178	1	15758	15758		0	0	1		+		28183	13550	13967	14025	32362	32362					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1960632205009	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.009	1	29.288	28.788	29.788	1.2789								0	0	0	1.0178	1	11738	11738		0	0	1		+		28184	13550	13967	14025	32363	32363					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1959716677666	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0088	1	1.7572	1.2572	2.2572	0.7484								0	0	0	1.0178	1	417	417		0	0	1		+		28185	13550	13967	14025	32364	32364					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1965820193291	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1742	1	6.905	6.405	7.405	0.73074								0	0	0	1.0178	1	2561	2561		0	0	1		+		28186	13550	13967	14025	32365	32365					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960632205009	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2081	1	7.9388	7.4388	8.4388	0.73074								0	0	0	1.0178	1	2994	2994		0	0	1		+		28187	13550	13967	14025	32366	32366					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960632205009	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3078	1	8.0386	7.5386	8.5386	0.73074								0	0	0	1.0178	1	3036	3036		0	0	1		+		28188	13550	13967	14025	32367	32367					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1959106326103	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4122	1	8.143	7.643	8.643	0.73074								0	0	0	1.0178	1	3079	3079		0	0	1		+		28189	13550	13967	14025	32368	32368					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960632205009	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5105	1	8.2413	7.7413	8.7413	0.73074								0	0	0	1.0178	1	3119	3119		0	0	1		+		28190	13550	13967	14025	32369	32369					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1959106326103	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6021	1	8.3328	7.8328	8.8328	0.73074								0	0	0	1.0178	1	3157	3157		0	0	1		+		28191	13550	13967	14025	32370	32370					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960937380791	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7893	1	8.52	8.02	9.02	0.73074								0	0	0	1.0178	1	3235	3235		0	0	1		+		28192	13550	13967	14025	32371	32371					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1963378787041	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.402	1	29.168	28.668	29.668	1.7668								0	0	0	1.0178	1	11468	11468		0	0	1		+		28193	13550	13967	14025	32372	32372					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1961242556572	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.474	1	31.273	30.773	31.773	1.7987								0	0	0	1.0178	1	12353	12353		0	0	1		+		28194	13550	13967	14025	32373	32373					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1965820193291	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.699	1	31.498	30.998	31.998	1.7987								0	0	0	1.0178	1	12449	12449		0	0	1		+		28195	13550	13967	14025	32374	32374					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1959411501884	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.824	1	31.628	31.128	32.128	1.8035								0	0	0	1.0178	1	12502	12502		0	0	1		+		28196	13550	13967	14025	32375	32375					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960327029228	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.947	1	31.762	31.262	32.262	1.8151								0	0	0	1.0178	1	12554	12554		0	0	1		+		28197	13550	13967	14025	32376	32376					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1960327029228	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.723	1	32.538	32.038	33.038	1.8151								0	0	0	1.0178	1	12879	12879		0	0	1		+		28198	13550	13967	14025	32377	32377					0.10978091613583274
RHPVGLLL	8	Unmodified	_RHPVGLLL_					0	0	0			REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	REV__ENST00000512335.5_1_5:1630638-1632802:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1963378787041	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.843	1	32.658	32.158	33.158	1.8151								0	0	0	1.0178	1	12929	12929		0	0	1		+		28199	13550	13967	14025	32378	32378					0.10978091613583274
RHPWRICW	8	Unmodified	_RHPWRICW_					0	0	0		ENST00000369103.2_1_10:121286828-121286921:-|nuORF	ENST00000369103.2_1_10:121286828-121286921:-|nuORF	ENST00000369103.2_1_10:121286828-121286921:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	577.2986938357353	2	577.295445	1152.57634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.22	1	101.29	100.79	101.79	0.067009								0	0	0	1.0178	1	42380	42380		0.6015	0.076735	1				28200	6094	13968	14026	32379	32379					0.006151707161961895
RHRARRALRRV	11	Unmodified	_RHRARRALRRV_					0	0	0		ENSG00000128310|ENST00000249041|GALR3	ENSG00000128310|ENST00000249041|GALR3	ENSG00000128310|ENST00000249041|GALR3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2538329958916	4	362.482989	1445.90285	1.5275	0.0005537	-0.33573	-0.0001217	1.1918	0.000432	362.48283483905914	41.301	0.74295	43.194	42.96	43.702	1.8927					32	23	2	0	0	0	0.14606	1	17478	17478		0	0	1	2310600			28201	2365	13969	14027	32380	32380					0.19773287933253414
RHREEKERRKK	11	Unmodified	_RHREEKERRKK_					0	0	0		ENSG00000130363|ENST00000367069|RSPH3;nc|ENSG00000130363|Q86UC2-2|RSPH3;nc|ENSG00000130363|Q86UC2|RSPH3	ENSG00000130363|ENST00000367069|RSPH3	ENSG00000130363|ENST00000367069|RSPH3	MSMS	GG20161007_CRH_Patient100_W632_01	3	776.4503051638603	2	776.450571	1550.88659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.68	1	102.84	102.34	103.34	0.16445								0	0	0	0.63775	1	43243	43243		0	0	1				28202	2431	13970	14028	32381	32381					0.13318117185849587
RHRELYSK	8	Unmodified	_RHRELYSK_					0	0	0			REV__ZNF765|p.N508Y|1|0.47|ENSG00000196417|chr19:53409077-53409077|A/T|missense_variant	REV__ZNF765|p.N508Y|1|0.47|ENSG00000196417|chr19:53409077-53409077|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2525817751884	3	363.536835	1087.58868	-1.5137	-0.0005503	-2.1712	-0.00078929	-3.6849	-0.0013396	363.53589472389007	10.103	0.21643	10.753	10.644	10.861	0.65058					11	6	2	0	0	0	2.3239	1	4191	4191		3.5965	0	1	127640	+		28203	11841	13971	14029	32382	32382					0.04838485660229708
RHRFMKRY	8	Unmodified	_RHRFMKRY_					0	0	0		ENST00000382357.3_1_21:34400138-34400483:+|nuORF	ENST00000382357.3_1_21:34400138-34400483:+|nuORF	ENST00000382357.3_1_21:34400138-34400483:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3279296755791	2	597.327276	1192.64	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.348	1	86.348	85.848	86.848	0								0	0	0	1.0178	1	35982	35982		0.6015	0	1				28204	6238	13972	14030	32383	32383					0.051385311532840205
RHRGARLR	8	Unmodified	_RHRGARLR_					0	0	0		ENST00000435760.5_1_3:11314034-11322732:+|nuORF	ENST00000435760.5_1_3:11314034-11322732:+|nuORF	ENST00000435760.5_1_3:11314034-11322732:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.627124011517	1	1021.62384	1020.61656	2.5234	0.0025779	1.0512	0.0010739	3.5746	0.0036519	1021.6244876548521	106.08	0.14129	106.24	106.16	106.3	0.15781					13	7	2	0	0	0	0.89178	1	45322	45322		0.69038	0	1	58268000			28205	6525	13973	14031	32384	32384					0.10707853430983505
RHRLLLLL	8	Unmodified	_RHRLLLLL_					0	0	0		JAM2|p.T196Lfs*37|1|0.26|ENSG00000154721|chr21:25698864-25698864|A/-|frameshift_variant;nc|ENSG00000154721|P57087-2|JAM2;ENSG00000154721|ENST00000480456|JAM2;nc|ENSG00000154721|P57087-3|JAM2	JAM2|p.T196Lfs*37|1|0.26|ENSG00000154721|chr21:25698864-25698864|A/-|frameshift_variant	JAM2|p.T196Lfs*37|1|0.26|ENSG00000154721|chr21:25698864-25698864|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2405578494072	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.16	1	29.936	29.436	30.436	1.7754								0	0	0	1.0178	1	11789	11789		0.45834	0	1				28206	3393	13974	14032	32385	32385					0.17698017838711166
RHRRGLGLRGS	11	Unmodified	_RHRRGLGLRGS_					0	0	0			REV__ENST00000420329.6_1_15:91185432-91185957:+|nuORF	REV__ENST00000420329.6_1_15:91185432-91185957:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2551757693291	3	422.253433	1263.73847	1.0196	0.00043053	3.0261	0.0012778	4.0457	0.0017083	422.2550698892577	93.304	0.8219	93.304	92.984	93.805	0					57	25	3	0	0	0	1.0254	1	39005	39005		2.2527	0.16876	1	1816300	+		28207	12972	13975	14033	32386	32386					0.11714850722682968
RHRRLHEKRRF	11	Unmodified	_RHRRLHEKRRF_					0	0	0			REV__nc|ENSG00000167685|Q8N0Y2-2|ZNF444	REV__nc|ENSG00000167685|Q8N0Y2-2|ZNF444	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.8034545779228	3	530.981936	1589.92398	3.4763	0.0018458	3.7658	0.0019996	7.2421	0.0038454	530.9851795995486	93.316	0.62295	94.593	94.42	95.043	1.277					24	19	2	0	0	0	0.14606	1	39450	39450		0.094841	0.011491	1	466430	+		28208	10873	13976	14034	32387	32387					0.15261253242147177
RHRRRRRWWWR	11	Unmodified	_RHRRRRRWWWR_					0	0	0			REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	REV__ENST00000475204.5_1_1:70687068-70687435:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	302.1960937380791	6	302.009809	1806.01519	-0.32764	-9.895E-05	0.78078	0.0002358	0.45314	0.00013685	302.00994657021454	15.963	0.30731	16.093	15.902	16.209	0.13022					14	9	2	0	0	0	0.14606	1	6659	6659		0	0	1	304350	+		28209	12667	13977	14035	32388	32388					0.14442561730129455
RHRRYKHT	8	Unmodified	_RHRRYKHT_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;nc|ENSG00000124092|Q8NI51-11|CTCFL;nc|ENSG00000102974|P49711-2|CTCF;nc|ENSG00000124092|Q8NI51-6|CTCFL;nc|ENSG00000124092|Q8NI51-5|CTCFL;CTCFL|p.T412Yfs*12|1|0.09|ENSG00000124092|chr20:57514688-57514689|-/TGCCTCTCCAAATTAAGTAAAGTACAATA|frameshift_variant;nc|ENSG00000124092|Q8NI51-9|CTCFL;nc|ENSG00000124092|Q8NI51-10|CTCFL;nc|ENSG00000124092|Q8NI51-4|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MSMS	GG20161007_CRH_Patient100_A02_02	2	385.2219421267509	3	385.21984	1152.63769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.98	1	104.04	103.54	104.54	0.059502								0	0	0	1.0178	1	43761	43761		1.4819	0.51963	1				28210	1409	13978	14036	32389	32389					0.06747818739836475
RHRRYKHT	8	Unmodified	_RHRRYKHT_					0	0	0		ENSG00000102974|ENST00000264010|CTCF;nc|ENSG00000124092|Q8NI51-11|CTCFL;nc|ENSG00000102974|P49711-2|CTCF;nc|ENSG00000124092|Q8NI51-6|CTCFL;nc|ENSG00000124092|Q8NI51-5|CTCFL;CTCFL|p.T412Yfs*12|1|0.09|ENSG00000124092|chr20:57514688-57514689|-/TGCCTCTCCAAATTAAGTAAAGTACAATA|frameshift_variant;nc|ENSG00000124092|Q8NI51-9|CTCFL;nc|ENSG00000124092|Q8NI51-10|CTCFL;nc|ENSG00000124092|Q8NI51-4|CTCFL;nc|ENSG00000124092|Q8NI51-2|CTCFL;nc|ENSG00000124092|Q8NI51-8|CTCFL;ENSG00000124092|ENST00000243914|CTCFL;nc|ENSG00000124092|Q8NI51-3|CTCFL;nc|ENSG00000124092|Q8NI51-7|CTCFL	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.2216064333916	3	385.21984	1152.63769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	104.11	103.61	104.61	0.16055								0	0	0	1.0178	1	43941	43941		1.4819	0.51963	1				28211	1409	13978	14036	32390	32390					0.06747818739836475
RHRYELEYH	9	Unmodified	_RHRYELEYH_					0	0	0			REV__nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	REV__nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8827392458916	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8629	1	3.8629	3.3629	4.3629	0								0	0	0	0.42693	1	1587	1587		0.26902	0	1		+		28212	9727	13979	14037	32391	32391					-0.012230481449705621
RHRYELEYH	9	Unmodified	_RHRYELEYH_					0	0	0			REV__nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	REV__nc|ENSG00000128298|Q6UXY1-2|BAIAP2L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8826171755791	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3378	1	8.3378	7.8378	8.8378	0								0	0	0	0.42693	1	3430	3430		0.26902	0	1		+		28213	9727	13979	14037	32392	32392					-0.012230481449705621
RHSRALRH	8	Unmodified	_RHSRALRH_					0	0	0		ENST00000472410.5_1_1:27684311-27685985:-|nuORF	ENST00000472410.5_1_1:27684311-27685985:-|nuORF	ENST00000472410.5_1_1:27684311-27685985:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2390319705009	3	344.868919	1031.58493	-0.24709	-8.5214E-05	4.0715	0.0014042	3.8245	0.0013189	345.20557683097303	15.403	0.18651	16.442	16.302	16.488	1.0392					8	5	2	0	0	0	2.3239	1	6332	6332		0.45834	0	1	930700			28214	6749	13980	14038	32393	32393					0.07039860677036813
RHVPLMVK	8	Unmodified	_RHVPLMVK_					0	0	0			REV__ENST00000524325.5_2_8:143293473-143310920:-|nuORF	REV__ENST00000524325.5_2_8:143293473-143310920:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2996093630791	2	490.297122	978.579691	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.16	1	104.33	103.83	104.83	0.1731								0	0	0	1.0178	1	44009	44009		2.5775	0.27475	1		+		28215	13648	13981	14039	32394	32394					0.08954420770191973
RHVRKKRKIK	10	Unmodified	_RHVRKKRKIK_					0	0	0		ENST00000533834.1_1_1:104080032-104087738:+|nuORF;nc|ENSG00000185946|Q96LT9-2|RNPC3;ENSG00000185946|ENST00000423855|RNPC3;ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000533834.1_1_1:104080032-104087738:+|nuORF;ENST00000605810.1_1_3:70174691-70175321:-|nuORF	ENST00000533834.1_1_1:104080032-104087738:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.7153198122978	4	337.983561	1347.90514	-2.1625	-0.00073089	-2.532	-0.00085577	-4.6945	-0.0015867	338.2337563072072	28.01	1.2177	28.01	27.562	28.779	0					77	39	4	0	0	0	0.1256	1	11898	11898		0.69767	0.69767	1	7174500			28216	4773;7558	13982	14040	32395	32395					0.2451032361839225
RIALAKEV	8	Unmodified	_RIALAKEV_					0	0	0		ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	ENSG00000183783|ENST00000360029|KCTD8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	300.6917602419853	3	300.527277	898.560001	-2.0905	-0.00062827	2.1814	0.00065556	0.090808	2.729E-05	300.52782002340257	64.433	0.32222	64.433	64.238	64.56	0					13	9	2	0	0	0	2.3239	1	26875	26875		0.40072	0	1	252380			28217	4667	13983	14041	32396	32396					0.10666368031093043
RIALLIVTY	9	Unmodified	_RIALLIVTY_					0	0	0			REV__ENSG00000169484|ENST00000641793|OR4K14	REV__ENSG00000169484|ENST00000641793|OR4K14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0700866580009	3	354.562099	1060.66447	-0.22743	-8.0637E-05	2.1178	0.00075091	1.8904	0.00067027	354.5623897407206	28.144	0.60668	29.423	29.184	29.791	1.2789					37	19	3	0	0	0	0.11833	1	11850	11850		0.96228	0	1	2721400	+		28218	10950	13984	14042	32397	32397					0.13656069787816705
RIANLCIFSCY	11	Unmodified	_RIANLCIFSCY_					0	0	0		ENST00000434457.6_2_9:19360473-19369888:+|nuORF	ENST00000434457.6_2_9:19360473-19369888:+|nuORF	ENST00000434457.6_2_9:19360473-19369888:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8831970095634	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.86	1	113.86	113.36	114.36	0								0	0	0	0.63775	1	49179	49179		0.08335	0	1				28219	6519	13985	14043	32398	32398					-0.012699271806695833
RIDLRELRPA	10	Unmodified	_RIDLRELRPA_					0	0	0		tr|A0A7D7AGR6|A0A7D7AGR6_9CLOTFlavinreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09740PE=3SV=1	tr|A0A7D7AGR6|A0A7D7AGR6_9CLOTFlavinreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09740PE=3SV=1	tr|A0A7D7AGR6|A0A7D7AGR6_9CLOTFlavinreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8710815310478	2	619.870028	1237.7255	1.764	0.0010935	-0.40126	-0.00024873	1.3628	0.00084473	619.8692542314951	77.947	0.73104	78.256	77.943	78.674	0.30932					55	22	3	0	0	0	0.89803	2	32582	32582;32662		0	0	1	1407400			28220	17343	13986	14044	32399;32400	32399					0.11614974819940471
RIDRSLVQRL	10	Unmodified	_RIDRSLVQRL_					0	0	0			REV__URB2|p.G493Afs*32|1|0.2|ENSG00000135763|chr1:229636089-229636089|G/-|frameshift_variant	REV__URB2|p.G493Afs*32|1|0.2|ENSG00000135763|chr1:229636089-229636089|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3847534060478	2	628.383303	1254.75205	2.0785	0.0013061	-1.1024	-0.00069272	0.97615	0.0006134	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.89803	1	33332	33332		1.4819	0.28856	1	6184900	+		28221	9954	13987	14045	32401	32401					0.1348666371127365
RIDYESDYFMV	11	Unmodified	_RIDYESDYFMV_					0	0	0			REV__GRID1|p.T368Dfs*28|1|0.05|ENSG00000182771|chr10:85856040-85856041|-/C|frameshift_variant	REV__GRID1|p.T368Dfs*28|1|0.05|ENSG00000182771|chr10:85856040-85856041|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.8824340701103	3	479.883349	1436.62822	0.70809	0.0003398	-0.32266	-0.00015484	0.38543	0.00018496	479.88273361616945	11.082	0.49277	11.082	10.771	11.264	0					27	15	2	0	0	0	1.0156	1	4566	4566		2.8433	0.21205	1	717460	+		28222	11365	13988	14046	32402	32402					-0.07263219961896539
RIETKGQYDEE	11	Unmodified	_RIETKGQYDEE_					0	0	0		ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	ENSG00000134757|ENST00000257189|DSG3	MSMS	GG20161007_CRH_Patient100_A02_02	2	684.3244506716728	2	684.325513	1366.63647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.936	1	87.18	86.68	87.68	0.24387								0	0	0	0.63775	1	36419	36419		1.0715	0.61312	1				28223	2633	13989	14047	32403	32403					-0.03217949720897195
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.8533813357353	2	530.853119	1059.69168	1.2704	0.00067441	-0.08569	-4.5489E-05	1.1847	0.00062892	530.8529433415215	106.12	0.1442	106.12	106.03	106.17	0					17	6	3	0	0	0	0.89178	1	45198	45198		0.69038	0	1	141650000	+		28224	14373	13990	14048	32404	32404					0.16422598118833776
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8535644412041	2	530.853119	1059.69168	2.8723	0.0015248	-2.2148	-0.0011757	0.65758	0.00034908	530.8518420846541	106.07	0.15126	106.13	106.04	106.19	0.05455					18	6	3	0	0	0	0.89178	1	45102	45102		0.69038	0	1	211990000	+		28225	14373	13990	14048	32405	32405					0.16422598118833776
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8537475466728	2	530.853119	1059.69168	3.1868	0.0016917	-2.7664	-0.0014686	0.42041	0.00022318	530.8517094803135	106.03	0.20364	106.19	106.1	106.3	0.15781					34	10	5	0	0	0	0.89051	1	45279	45279		2.3027	0	1	806590000	+		28226	14373	13990	14048	32406	32406					0.16422598118833776
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	530.853119	1059.69168	1.2704	0.00067441	-0.08569	-4.5489E-05	1.1847	0.00062892	530.8529433415215	106.12	0.1442	106.12	106.03	106.17	0	-0.1146	0.0021005	NaN	2.3027	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	141650000	+		28227	14373	13990	14048							0.16422598118833776
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	530.853119	1059.69168	2.8723	0.0015248	-2.2148	-0.0011757	0.65758	0.00034908	530.8518420846541	106.07	0.15126	106.13	106.04	106.19	0.05455	-0.11265	-0.00015992	NaN	2.3027	18	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211990000	+		28228	14373	13990	14048							0.16422598118833776
RIFIKKKQ	8	Unmodified	_RIFIKKKQ_					0	0	0			REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	REV__NAPG|p.E180Kfs*23|1|0.1|ENSG00000134265|chr18:10546354-10546354|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	530.853119	1059.69168	3.4624	0.001838	-3.9903	-0.0021183	-0.52799	-0.00028028	531.3522322289741	106.35	0.10574	106.52	106.44	106.54	0.16174	0.27871	-0.0020451	NaN	2.3027	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1771500	+		28229	14373	13990	14048							0.16422598118833776
RIFKKFAK	8	Unmodified	_RIFKKFAK_					0	0	0			REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5591003298759	3	346.5588	1036.65457	-0.198	-6.8619E-05	2.0017	0.00069372	1.8037	0.0006251	346.55931318837986	21.798	0.27213	22.975	22.809	23.081	1.177					13	8	2	0	0	0	0.89156	1	9105	9105		1.4819	1.0812	1	461490	+		28230	8069	13991	14049	32407	32407					0.13770926573056386
RIFKKFAK	8	Unmodified	_RIFKKFAK_					0	0	0			REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	346.5588	1036.65457	-2.0946	-0.00072589	2.7105	0.00093936	0.61598	0.00021347	346.55940251609854	22.934	0.33184	22.934	22.837	23.169	0	-0.027572	0.00078986	NaN	1.4819	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	422530	+		28231	8069	13991	14049							0.13770926573056386
RIFKKFAK	8	Unmodified	_RIFKKFAK_					0	0	0			REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	346.5588	1036.65457	-0.198	-6.8619E-05	2.0017	0.00069372	1.8037	0.0006251	346.55931318837986	21.798	0.27213	22.975	22.809	23.081	1.177	0.013848	5.2935E-05	NaN	1.4819	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461490	+		28232	8069	13991	14049							0.13770926573056386
RIFKKFAK	8	Unmodified	_RIFKKFAK_					0	0	0			REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	REV__ABCA13|p.L1709Afs*18|1|0.2|ENSG00000179869|chr7:48274789-48274790|-/A|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	346.5588	1036.65457	0.0065879	2.2831E-06	1.4466	0.00050132	1.4532	0.00050361	346.5588637735247	21.36	0.4189	22.975	22.813	23.232	1.6158	0.013724	-0.00052426	NaN	1.4819	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568290	+		28233	8069	13991	14049							0.13770926573056386
RIFQIRTR	8	Unmodified	_RIFQIRTR_					0	0	0			REV__ENSG00000166118|ENST00000299140|SPATA19	REV__ENSG00000166118|ENST00000299140|SPATA19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3369628787041	2	545.335624	1088.6567	2.7063	0.0014758	0.16524	9.0109E-05	2.8715	0.001566	545.3357232865171	95.73	0.14205	95.854	95.801	95.944	0.12331					8	4	2	0	0	0	0.89178	1	40069	40069		0.69038	0	1	973530	+		28234	10812	13992	14050	32408	32408					0.11591355310883955
RIFQIRTR	8	Unmodified	_RIFQIRTR_					0	0	0			REV__ENSG00000166118|ENST00000299140|SPATA19	REV__ENSG00000166118|ENST00000299140|SPATA19	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	545.335624	1088.6567	1.3687	0.00074642	-0.70075	-0.00038215	0.66798	0.00036427	545.8370390855114	95.864	0.23212	95.864	95.746	95.978	0	0.0050162	-0.00053329	NaN	0.69038	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1152500	+		28235	10812	13992	14050							0.11591355310883955
RIFQIRTR	8	Unmodified	_RIFQIRTR_					0	0	0			REV__ENSG00000166118|ENST00000299140|SPATA19	REV__ENSG00000166118|ENST00000299140|SPATA19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	545.335624	1088.6567	2.7063	0.0014758	0.16524	9.0109E-05	2.8715	0.001566	545.3357232865171	95.73	0.14205	95.854	95.801	95.944	0.12331	-0.0050162	0.00041122	NaN	0.69038	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	973530	+		28236	10812	13992	14050							0.11591355310883955
RIGLIWEILV	10	Unmodified	_RIGLIWEILV_					0	0	0		TAS2R13|p.K207Rfs*23|1|0.08|ENSG00000212128|chr12:10908639-10908679|TCTGTGTCCTTTGTAATTGAGTTGCATTTTCTGGAGATGTT/-|frameshift_variant;ENSG00000212128|ENST00000390677|TAS2R13	TAS2R13|p.K207Rfs*23|1|0.08|ENSG00000212128|chr12:10908639-10908679|TCTGTGTCCTTTGTAATTGAGTTGCATTTTCTGGAGATGTT/-|frameshift_variant	TAS2R13|p.K207Rfs*23|1|0.08|ENSG00000212128|chr12:10908639-10908679|TCTGTGTCCTTTGTAATTGAGTTGCATTTTCTGGAGATGTT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.6937133669853	4	303.693221	1210.74378	0.18258	5.5448E-05	1.776	0.00053937	1.9586	0.00059482	303.69369355675894	25.514	0.80056	25.766	25.151	25.951	0.25197					48	25	2	0	0	0	0.89803	1	10545	10545		0.77653	0.078866	1	3340100			28237	5208	13993	14051	32409	32409					0.14683716741933495
RIGNRRLPSV	10	Unmodified	_RIGNRRLPSV_					0	0	0			REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|374|2|anti-sense	REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|374|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3578979372978	2	584.357088	1166.69962	1.9193	0.0011216	-1.138	-0.00066499	0.78131	0.00045656	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.89803	1	31354	31354		0.40072	0	1	6168700	+		28238	14305	13994	14052	32410	32410					0.12294125368293862
RIGNRRLPSV	10	Unmodified	_RIGNRRLPSV_					0	0	0			REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|374|2|anti-sense	REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|374|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3580200076103	2	584.357088	1166.69962	1.8497	0.0010809	-0.65371	-0.000382	1.196	0.00069888	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	0.89803	1	30273	30273		0.40072	0	1	3000400	+		28239	14305	13994	14052	32411	32411					0.12294125368293862
RIGRLHLVKL	10	Unmodified	_RIGRLHLVKL_					0	0	0			REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B	REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.2714721560478	3	402.271542	1203.7928	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.43	1	111.47	110.97	111.97	0.047043								0	0	0	0.66254	1	48044	48044		0.15932	0.01943	1		+		28240	9625	13995	14053	32412	32412					0.19905049821545617
RIHEYYEHR	9	Unmodified	_RIHEYYEHR_					0	0	0		ENST00000467204.1_1_1:155252337-155256975:+|nuORF;ENST00000496230.5_1_1:155254296-155257077:+|nuORF;ENSG00000143630|ENST00000368358|HCN3	ENST00000467204.1_1_1:155252337-155256975:+|nuORF	ENST00000467204.1_1_1:155252337-155256975:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828002810478	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3676	1	6.104	5.604	6.604	0.73642								0	0	0	0.42693	1	2226	2226		0.26902	0	1				28241	3045	13996	14054	32413	32413					-0.012230481449705621
RIHKVDIPS	9	Unmodified	_RIHKVDIPS_					0	0	0		nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1065.298266589642	1	1064.6211	1063.61383	2.0522	0.0021848	0.40005	0.0004259	2.4522	0.0026107	1065.625818282371	83.76	0.3783	84.948	84.704	85.083	1.1879					18	11	3	0	0	0	0.10844	1	35079	35079		11.64	0	1	3543400			28242	2656	13997	14055	32414	32414					0.08456540462793782
RIIDVVYNA	9	Unmodified	_RIIDVVYNA_					0	0	0		RPS8|p.N87K|1|0.07|ENSG00000142937|chr1:44777663-44777663|T/A|missense_variant;ENSG00000142937|ENST00000396651|RPS8	RPS8|p.N87K|1|0.07|ENSG00000142937|chr1:44777663-44777663|T/A|missense_variant	RPS8|p.N87K|1|0.07|ENSG00000142937|chr1:44777663-44777663|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8021728396416	2	531.800749	1061.58694	1.0127	0.00053857	-1.2685	-0.00067461	-0.25581	-0.00013604	531.8002762994421	37.721	0.38706	39.542	39.372	39.759	1.8202					23	12	3	0	0	0	0.40005	1	15813	15813		20.415	2.2796	1	2856700			28243	3008	13998	14056	32415	32415					0.058614318515992636
RIIPNVLLVN	10	Unmodified	_RIIPNVLLVN_					0	0	0		tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	384.2429687380791	3	384.248403	1149.72338	0.020586	7.9103E-06	-1.2037	-0.00046251	-1.1831	-0.0004546	384.24731270297343	50.485	0.5089	50.485	50.341	50.85	0					24	15	2	0	0	0	0.89803	1	21058	21058		0.69767	0	1	706170			28244	17314	13999	14057	32416	32416					0.1545054608211558
RIIPNVLLVN	10	Unmodified	_RIIPNVLLVN_					0	0	0		tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	tr|A0A7D7A6Z6|A0A7D7A6Z6_9CLOTM15familymetallopeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01600PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	384.248403	1149.72338	1.6727	0.00064274	-2.8309	-0.0010878	-1.1582	-0.00044504	384.2467165514608	50.177	0.15528	50.505	50.419	50.574	0.32824	0.010151	-0.0014993	NaN	0.69767	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	911560			28245	17314	13999	14057							0.1545054608211558
RIIQPLWII	9	Unmodified	_RIIQPLWII_					0	0	0			REV__tr|A0A7D6ZZK1|A0A7D6ZZK1_9CLOTCynX/NimTfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20745PE=4SV=1	REV__tr|A0A7D6ZZK1|A0A7D6ZZK1_9CLOTCynX/NimTfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20745PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1538268923759	3	384.581493	1150.72265	0.76034	0.00029241	1.3057	0.00050216	2.0661	0.00079458	384.58176074015876	24.17	1.2829	24.412	24.136	25.419	0.24251					86	41	5	0	0	0	0.11954	1	10259	10259		0.26902	0	1	15110000	+		28246	15797	14000	14058	32417	32417					0.15331751433086538
RIIQPLWII	9	Unmodified	_RIIQPLWII_					0	0	0			REV__tr|A0A7D6ZZK1|A0A7D6ZZK1_9CLOTCynX/NimTfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20745PE=4SV=1	REV__tr|A0A7D6ZZK1|A0A7D6ZZK1_9CLOTCynX/NimTfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20745PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1537048220634	3	384.581493	1150.72265	0.73213	0.00028157	1.9249	0.00074027	2.657	0.0010218	384.58202342280043	23.565	0.65212	23.798	23.474	24.127	0.23306					78	20	5	0	0	0	0.11954	1	9701	9701		0.26902	0	1	18561000	+		28247	15797	14000	14058	32418	32418					0.15331751433086538
RIKAITTC	8	Unmodified	_RIKAITTC_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	905.5238525271416	1	905.523698	904.516422	1.1297	0.001023	-1.6535	-0.0014973	-0.52377	-0.00047429	905.5224083194014	107.78	0.17517	107.78	107.7	107.88	0					22	9	3	0	0	0	0.89198	1	46293	46293		0	0	1	78309000			28248	4818	14001	14059	32419	32419					0.06034435262267834
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9173461794853	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.7	1	104.7	104.2	105.2	0								0	0	0	0.42693	1	44249	44249		0	0	1		+		28249	15680	14002	14060	32420	32420					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9163696169853	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.81	1	104.81	104.31	105.31	0								0	0	0	0.42693	1	44329	44329		0	0	1		+		28250	15680	14002	14060	32421	32421					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9172851443291	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.91	1	104.91	104.41	105.41	0								0	0	0	0.42693	1	44404	44404		0	0	1		+		28251	15680	14002	14060	32422	32422					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9164306521416	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.01	1	105.01	104.51	105.51	0								0	0	0	0.42693	1	44471	44471		0	0	1		+		28252	15680	14002	14060	32423	32423					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9164306521416	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.31	1	105.31	104.81	105.81	0								0	0	0	0.42693	1	44664	44664		0	0	1		+		28253	15680	14002	14060	32424	32424					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9175292849541	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.69	1	105.69	105.19	106.19	0								0	0	0	0.42693	1	44925	44925		0	0	1		+		28254	15680	14002	14060	32425	32425					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9158813357353	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.99	1	105.99	105.49	106.49	0								0	0	0	0.42693	1	45123	45123		0	0	1		+		28255	15680	14002	14060	32426	32426					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9176513552666	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.3	1	106.3	105.8	106.8	0								0	0	0	0.42693	1	45328	45328		0	0	1		+		28256	15680	14002	14060	32427	32427					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9176513552666	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.4	1	106.4	105.9	106.9	0								0	0	0	0.42693	1	45393	45393		0	0	1		+		28257	15680	14002	14060	32428	32428					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9160644412041	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.13	1	107.13	106.63	107.63	0								0	0	0	0.42693	1	45855	45855		0	0	1		+		28258	15680	14002	14060	32429	32429					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9200927615166	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.51	1	111.66	111.16	112.16	0.15038								0	0	0	0.42693	1	48326	48326		0	0	1		+		28259	15680	14002	14060	32430	32430					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9186889529228	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.63	1	111.78	111.28	112.28	0.15038								0	0	0	0.42693	1	48378	48378		0	0	1		+		28260	15680	14002	14060	32431	32431					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9188110232353	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.75	1	111.9	111.4	112.4	0.15038								0	0	0	0.42693	1	48430	48430		0	0	1		+		28261	15680	14002	14060	32432	32432					0.25992890255224665
RIKKKLILI	9	Unmodified	_RIKKKLILI_					0	0	0			REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	REV__tr|A0A7D6ZNS0|A0A7D6ZNS0_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17500PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9186889529228	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.39	1	112.54	112.04	113.04	0.14912								0	0	0	0.42693	1	48692	48692		0	0	1		+		28262	15680	14002	14060	32433	32433					0.25992890255224665
RIKLMHQVLRI	11	Unmodified	_RIKLMHQVLRI_					0	0	0			REV__ENSG00000154143|ENST00000284288|PANX3	REV__ENSG00000154143|ENST00000284288|PANX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	352.4750549197197	4	352.474875	1405.87039	0.14653	5.1647E-05	0.60493	0.00021322	0.75145	0.00026487	352.47533255871787	24.384	0.46408	25.625	25.268	25.732	1.241					17	14	2	0	0	0	1.0402	1	10207	10207		0.094841	0	1	696200	+		28263	10460	14003	14061	32434	32434					0.18369319695420927
RILDILEYI	9	Unmodified	_RILDILEYI_					0	0	0		ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3403808474541	2	574.339707	1146.66486	5.8626	0.0033671	-0.87113	-0.00050032	4.9915	0.0028668	574.3394843382397	88.78	0.45249	89.836	89.626	90.079	1.0562					26	13	3	0	0	0	0.50272	1	37382	37382		15.248	3.0078	1	1871800			28264	1301	14004	14062	32435	32435					0.09739444716979051
RILDILEYI	9	Unmodified	_RILDILEYI_					0	0	0		ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	ENSG00000100749|ENST00000216639|VRK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3434326052666	2	574.339707	1146.66486	4.7066	0.0027032	0.69161	0.00039722	5.3982	0.0031004	574.3404549108635	88.358	0.41298	89.804	89.604	90.017	1.4467					25	12	3	0	0	0	0.40005	2	37224	37224;37275		20.415	1.3424	1	1444900			28265	1301	14004	14062	32436;32437	32436					0.09739444716979051
RILDMSSLL	9	Unmodified	_RILDMSSLL_					0	0	0			REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	349.8675720095634	3	349.867082	1046.57942	0.97663	0.00034169	-0.62687	-0.00021932	0.34975	0.00012237	349.8673688282753	70.554	0.49474	70.877	70.647	71.141	0.32224					38	15	3	0	0	0	0.13623	2	29553	29505;29553		40.239	1.6245	1	2359800	+		28266	12714	14005	14063	32438;32439	32439					0.05798956259695842
RILDMSSLL	9	Unmodified	_RILDMSSLL_					0	0	0			REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	349.867082	1046.57942	0.97663	0.00034169	-0.62687	-0.00021932	0.34975	0.00012237	349.8673688282753	70.554	0.49474	70.877	70.647	71.141	0.32224	0.014907	-0.00037843	NaN	40.239	38	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2359800	+		28267	12714	14005	14063							0.05798956259695842
RILDMSSLL	9	Unmodified	_RILDMSSLL_					0	0	0			REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	349.867082	1046.57942	0.84317	0.000295	-0.78704	-0.00027536	0.056127	1.9637E-05	349.86693637682595	69.321	0.56158	70.687	70.472	71.033	1.3657	-0.17468	-0.00054654	NaN	40.239	44	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6832400	+		28268	12714	14005	14063							0.05798956259695842
RILDMSSLL	9	Unmodified	_RILDMSSLL_					0	0	0			REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	REV__ENST00000375315.6_1_9:97717475-97717559:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	349.867082	1046.57942	0.98431	0.00034438	-1.1506	-0.00040254	-0.16625	-5.8164E-05	349.86675047620366	68.81	0.59932	70.663	70.378	70.977	1.853	-0.19842	-0.00092809	NaN	40.239	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7160800	+		28269	12714	14005	14063							0.05798956259695842
RILHKTKGKR	10	Unmodified	_RILHKTKGKR_					0	0	0		nc|ENSG00000117036|P41162-2|ETV3;ENSG00000268041|ENST00000597630|ERFL;ENSG00000253831|ENST00000454449|ETV3L;nc|ENSG00000105722|P50548-2|ERF;ENSG00000117036|ENST00000368192|ETV3;ENSG00000105722|ENST00000222329|ERF	nc|ENSG00000117036|P41162-2|ETV3	nc|ENSG00000117036|P41162-2|ETV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.9056884646416	2	618.904205	1235.79386	2.8747	0.0017792	-0.77278	-0.00047827	2.1019	0.0013009	618.9037356184701	105.93	0.18031	106.09	105.98	106.16	0.15859					24	8	4	0	0	0	0.89803	1	45214	45214		1.6526	0	1	531780000			28270	1538	14006	14064	32440	32440					0.18539264190440008
RILHKTKGKR	10	Unmodified	_RILHKTKGKR_					0	0	0		nc|ENSG00000117036|P41162-2|ETV3;ENSG00000268041|ENST00000597630|ERFL;ENSG00000253831|ENST00000454449|ETV3L;nc|ENSG00000105722|P50548-2|ERF;ENSG00000117036|ENST00000368192|ETV3;ENSG00000105722|ENST00000222329|ERF	nc|ENSG00000117036|P41162-2|ETV3	nc|ENSG00000117036|P41162-2|ETV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.9051391482353	2	618.904205	1235.79386	2.9335	0.0018156	-1.4851	-0.00091911	1.4485	0.00089647	618.9032582923428	105.9	0.16025	106.06	105.97	106.13	0.16679					24	7	5	0	0	0	0.89803	1	45137	45137		1.6526	0	1	382420000			28271	1538	14006	14064	32441	32441					0.18539264190440008
RILKFLKLFI	10	Unmodified	_RILKFLKLFI_					0	0	0		ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	323.4723388552666	4	323.471964	1289.85875	0.07013	2.2685E-05	1.2281	0.00039724	1.2982	0.00041993	323.47236871175977	23.889	1.1411	25.13	24.591	25.732	1.241					135	36	6	0	0	0	0.89803	1	9823	9823		0.15932	0.15932	1	25303000			28272	4591	14007	14065	32442	32442					0.22541445943716099
RILKFLKLFI	10	Unmodified	_RILKFLKLFI_					0	0	0		ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	323.471964	1289.85875	0.20447	6.6142E-05	1.7034	0.00055101	1.9079	0.00061715	323.4725369312493	25.126	1.3505	25.378	24.873	26.223	0.25197	0.18556	0.00024748	NaN	0.15932	145	43	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23084000			28273	4591	14007	14065							0.22541445943716099
RILKFLKLFI	10	Unmodified	_RILKFLKLFI_					0	0	0		ENST00000546531.5_1_12:49396684-49399341:-|nuORF;nc|ENSG00000181929|P54619-2|PRKAG1;ENSG00000181929|ENST00000548065|PRKAG1;nc|ENSG00000181929|P54619-3|PRKAG1	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	ENST00000546531.5_1_12:49396684-49399341:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	323.471964	1289.85875	0.07013	2.2685E-05	1.2281	0.00039724	1.2982	0.00041993	323.47236871175977	23.889	1.1411	25.13	24.591	25.732	1.241	-0.062039	-0.00036757	NaN	0.15932	135	36	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25303000			28274	4591	14007	14065							0.22541445943716099
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9164306521416	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.38	1	103.38	102.88	103.88	0								0	0	0	0.42693	1	43375	43375		0	0	1		+		28275	15863	14008	14066	32443	32443					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.9165527224541	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.88	1	103.88	103.38	104.38	0								0	0	0	0.42693	1	43724	43724		0	0	1		+		28276	15863	14008	14066	32444	32444					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.9168578982353	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.87	1	108.92	108.42	109.42	0.050644								0	0	0	0.42693	1	46876	46876		0	0	1		+		28277	15863	14008	14066	32445	32445					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.9176513552666	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.48	1	109.53	109.03	110.03	0.048843								0	0	0	0.42693	1	47223	47223		0	0	1		+		28278	15863	14008	14066	32446	32446					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.9188110232353	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.61	1	109.66	109.16	110.16	0.048843								0	0	0	0.42693	1	47292	47292		0	0	1		+		28279	15863	14008	14066	32447	32447					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9167358279228	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.32	1	108.48	107.98	108.98	0.15795								0	0	0	0.42693	1	46741	46741		0	0	1		+		28280	15863	14008	14066	32448	32448					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9145385622978	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.53	1	108.68	108.18	109.18	0.1548								0	0	0	0.42693	1	46873	46873		0	0	1		+		28281	15863	14008	14066	32449	32449					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9161254763603	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.85	1	109.01	108.51	109.51	0.1548								0	0	0	0.42693	1	47087	47087		0	0	1		+		28282	15863	14008	14066	32450	32450					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9163696169853	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.95	1	109.11	108.61	109.61	0.1548								0	0	0	0.42693	1	47149	47149		0	0	1		+		28283	15863	14008	14066	32451	32451					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9165527224541	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.26	1	109.42	108.92	109.92	0.1548								0	0	0	0.42693	1	47346	47346		0	0	1		+		28284	15863	14008	14066	32452	32452					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9222289919853	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.7	1	109.85	109.35	110.35	0.15228								0	0	0	0.42693	1	47583	47583		0	0	1		+		28285	15863	14008	14066	32453	32453					0.2599289025520193
RILKIKLIK	9	Unmodified	_RILKIKLIK_					0	0	0			REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	REV__tr|A0A7D7A3G6|A0A7D7A3G6_9CLOTtRNA(Ile)-lysidinesynthaseOS=ClostridiumintestinaleOX=36845GN=tilSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.9212524294853	2	562.915719	1123.81688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.06	1	110.22	109.72	110.72	0.15228								0	0	0	0.42693	1	47741	47741		0	0	1		+		28286	15863	14008	14066	32454	32454					0.2599289025520193
RILRLKRFF	9	Unmodified	_RILRLKRFF_					0	0	0			REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant;REV__nc|ENSG00000171105|P06213-2|INSR	REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	312.1348754763603	4	312.956747	1247.79788	0.39234	0.00012279	2.6127	0.00081765	3.005	0.00094044	312.9568212508334	38.393	0.99847	40.229	39.656	40.654	1.8366					57	31	2	0	0	0	0.11954	1	15985	15985		0.26902	0.1097	1	2976500	+		28287	14234;11009	14009	14067	32455	32455					0.18389353684165144
RILRLKRFF	9	Unmodified	_RILRLKRFF_					0	0	0			REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant;REV__nc|ENSG00000171105|P06213-2|INSR	REV__INSR|p.D440Tfs*47|1|0.48|ENSG00000171105|chr19:7170702-7170702|C/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	312.956747	1247.79788	0.86816	0.0002717	2.4174	0.00075653	3.2855	0.0010282	312.9567980660962	39.002	0.72591	40.298	40.007	40.732	1.2961	0.034392	-0.00016001	NaN	0.26902	41	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4290800	+		28288	14234;11009	14009	14067							0.18389353684165144
RIMEFTTTL	9	Unmodified	_RIMEFTTTL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2983886599541	2	556.294442	1110.57433	2.1646	0.0012042	0.40731	0.00022658	2.5719	0.0014308	556.2947736796563	48.171	0.30621	50.149	50.022	50.328	1.9772					15	9	2	0	0	0	0.21592	1	20166	20166		31.268	1.0435	1	1225900			28289	5388	14010	14068	32456	32456					0.023466523970455455
RIPGMKKP	8	Unmodified	_RIPGMKKP_					0	0	0			REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	309.5241271853447	3	309.52499	925.553142	-3.0804	-0.00095347	1.385	0.00042868	-1.6955	-0.0005248	309.52530902490275	22.391	0.51844	22.391	22.06	22.578	0					45	16	4	0	0	0	0.89187	1	9315	9315		0.40072	0	1	8261200	+		28290	10016	14011	14069	32457	32457					0.08738731878861472
RIPHLVKK	8	Unmodified	_RIPHLVKK_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6;ERCC6|p.A1270Pfs*25|1|0.08|ENSG00000225830|chr10:49461527-49461527|C/-|frameshift_variant	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8346435427666	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.773	1	18.773	18.273	19.273	0								0	0	0	1.0178	1	7803	7803		2.5775	0	1				28291	5292	14012	14070	32458	32458					0.15458042430327623
RIPLRRQKLPK	11	Unmodified	_RIPLRRQKLPK_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719116091728	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.256	1	47.256	46.756	47.756	0								0	0	0	0.63775	1	19746	19746		2.9952	0	1				28292	5365	14013	14071	32459	32459					0.23431770695719933
RIPLRRQKLPK	11	Unmodified	_RIPLRRQKLPK_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9733764529228	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.372	1	47.372	46.872	47.872	0								0	0	0	0.63775	1	19794	19794		2.9952	0	1				28293	5365	14013	14071	32460	32460					0.23431770695719933
RIPLRRQKLPK	11	Unmodified	_RIPLRRQKLPK_					0	0	0		ENSG00000244486|ENST00000622235|SCARF2;nc|ENSG00000244486|Q96GP6|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	ENSG00000244486|ENST00000622235|SCARF2	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9714233279228	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.692	1	48.692	48.192	49.192	0								0	0	0	0.63775	1	20334	20334		2.9952	0	1				28294	5365	14013	14071	32461	32461					0.23431770695719933
RIQCCETV	8	Unmodified	_RIQCCETV_					0	0	0		ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	MSMS	GG20161007_CRH_Patient100_A02_02	2	476.2295410037041	2	476.222962	950.431372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.332	1	56.654	56.154	57.154	0.32103								0	0	0	1.0178	1	23609	23609		15.847	1.2655	1				28295	5254	14014	14072	32462	32462					-0.04582678265830964
RIRKPRRPLLN	11	Unmodified	_RIRKPRRPLLN_					0	0	0			REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	REV__ENST00000416823.1_1_22:29702661-29703048:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0703002810478	4	355.484931	1417.91062	-1.5629	-0.00055559	0.57502	0.00020441	-0.9879	-0.00035118	355.7356712294415	29.237	0.15329	29.237	29.178	29.332	0					6	4	2	0	0	0	0.14606	1	12249	12249		0	0	1	184410	+		28296	12950	14015	14073	32463	32463					0.21838002410231638
RIRPQKKRKRR	11	Unmodified	_RIRPQKKRKRR_					0	0	0		ENSG00000159714|ENST00000565726|ZDHHC1	ENSG00000159714|ENST00000565726|ZDHHC1	ENSG00000159714|ENST00000565726|ZDHHC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	761.5604736208916	2	761.505484	1520.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.212	1	94.953	94.453	95.453	0.74124								0	0	0	0.63775	1	39642	39642		0	0	1				28297	3539	14016	14074	32464	32464					0.25675587315686244
RIRPRLKLK	9	Unmodified	_RIRPRLKLK_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	590.4136230349541	2	590.411666	1178.80878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.062	1	89.062	88.562	89.562	0								0	0	0	0.42693	1	37231	37231		0	0	1		+		28298	12003	14017	14075	32465	32465					0.22652756058414525
RIRPRLKLK	9	Unmodified	_RIRPRLKLK_					0	0	0			REV__ENSG00000270765|ENST00000604641|GAS2L2	REV__ENSG00000270765|ENST00000604641|GAS2L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	590.4131347537041	2	590.411666	1178.80878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.54	1	89.54	89.04	90.04	0								0	0	0	0.42693	1	37427	37427		0	0	1		+		28299	12003	14017	14075	32466	32466					0.22652756058414525
RIRRWPWIL	9	Unmodified	_RIRRWPWIL_					0	0	0		ENST00000478558.1_1_1:153631938-153633685:+|nuORF	ENST00000478558.1_1_1:153631938-153633685:+|nuORF	ENST00000478558.1_1_1:153631938-153633685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	432.6017639040947	3	432.59977	1294.77748	4.147	0.001794	-1.824	-0.00078907	2.3229	0.0010049	432.59896265354115	95.422	0.42627	95.843	95.58	96.006	0.4212					42	17	4	0	0	0	0.81521	1	40211	40211		2.7352	0.30041	1	12807000			28300	6805	14018	14076	32467	32467					0.14188183024361933
RIRTLLLSDR	10	Unmodified	_RIRTLLLSDR_					0	0	0			REV__sp|Q6SWB8|UL13_HCMVMUncharacterizedproteinUL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL13PE=3SV=1	REV__sp|Q6SWB8|UL13_HCMVMUncharacterizedproteinUL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL13PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	621.8882324099541	2	621.885678	1241.7568	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.495	1	13.495	12.995	13.995	0								0	0	0	0.66102	1	5592	5592		2.7352	1.0826	1		+		28301	14656	14019	14077	32468	32468					0.14559547854037191
RIRVIKKKKV	10	Unmodified	_RIRVIKKKKV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.4557983279228	2	634.456074	1266.89759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.11	1	110.26	109.76	110.76	0.15228								0	0	0	0.66264	1	47760	47760		0	0	1				28302	1111	14020	14078	32469	32469					0.27482171298083813
RIRVIKKKKV	10	Unmodified	_RIRVIKKKKV_					0	0	0		ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	ENSG00000088882|ENST00000380605|CPXM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.4555541872978	2	634.456074	1266.89759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.33	1	112.48	111.98	112.98	0.14912								0	0	0	0.66264	1	48667	48667		0	0	1				28303	1111	14020	14078	32470	32470					0.27482171298083813
RISQFKTKR	9	Unmodified	_RISQFKTKR_					0	0	0		ENST00000394524.7_1_4:114374303-114374375:-|nuORF	ENST00000394524.7_1_4:114374303-114374375:-|nuORF	ENST00000394524.7_1_4:114374303-114374375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.5718261599541	3	388.571768	1162.69348	0.39031	0.00015166	0.43275	0.00016816	0.82306	0.00031982	388.57191902025363	90.486	0.61919	90.486	90.193	90.812	0					63	19	5	0	0	0	0.85252	1	37806	37806		0.20686	0	1	38226000			28304	6283	14021	14079	32471	32471					0.11863607136797327
RITWRRRQYLR	11	Unmodified	_RITWRRRQYLR_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MSMS	GG20161007_CRH_Patient100_A02_02	2	802.4235717654228	2	802.473849	1602.93315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.243	1	91.433	90.933	91.933	0.19042								0	0	0	0.63775	1	38222	38222		0.30703	0.30703	1		+		28305	14570	14022	14080	32472	32472					0.15579601807826293
RITWRRRQYLR	11	Unmodified	_RITWRRRQYLR_					0	0	0			REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	REV__nc|ENSG00000290456|Q8N1L4-2|CYP4Z2P	MSMS	GG20161007_CRH_Patient100_W632_01	3	802.1957275271416	2	802.473849	1602.93315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.189	1	97.473	96.973	97.973	0.28442								0	0	0	0.63775	1	40895	40895		0.26902	0.26902	1		+		28306	14570	14022	14080	32473	32473					0.15579601807826293
RIVRLLVEE	9	Unmodified	_RIVRLLVEE_					0	0	0		nc|ENSG00000203859|P26439-2|HSD3B2;ENSG00000203859|ENST00000369416|HSD3B2	nc|ENSG00000203859|P26439-2|HSD3B2;ENSG00000203859|ENST00000369416|HSD3B2	ENSG00000203859|ENST00000369416|HSD3B2	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2366515994072	3	376.236274	1125.68699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.42	1	111.47	110.97	111.97	0.047043								0	0	0	0.42693	1	48042	48042		1.0715	0	1				28307	7974;5117	14023	14081	32474	32474					0.12917669185412706
RIVRVCHQLK	10	Unmodified	_RIVRVCHQLK_					0	0	0		CCNT1|p.D361Ifs*29|1|0.45|ENSG00000129315|chr12:48694133-48694133|C/-|frameshift_variant	CCNT1|p.D361Ifs*29|1|0.45|ENSG00000129315|chr12:48694133-48694133|C/-|frameshift_variant	CCNT1|p.D361Ifs*29|1|0.45|ENSG00000129315|chr12:48694133-48694133|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6923705935478	4	313.692121	1250.73938	0.061516	1.9297E-05	1.2054	0.00037813	1.2669	0.00039743	313.69242795483547	28.302	0.51793	30.077	29.665	30.183	1.7754					62	16	4	0	0	0	0.89803	1	11760	11760		0.69767	0.24315	1	33547000			28308	126	14024	14082	32475	32475					0.12403929047354723
RIWGDKRRKLR	11	Unmodified	_RIWGDKRRKLR_					0	0	0			REV__ENST00000316077.13_1_X:135308153-135309516:-|nuORF	REV__ENST00000316077.13_1_X:135308153-135309516:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	743.4637939333916	2	742.457668	1482.90078	2.1625	0.0016056	3.5442	0.0026314	5.7067	0.004237	743.4607004007956	85.588	1.1508	86.715	86.412	87.563	1.1265					98	47	3	0	0	0	1.0396	1	35889	35889		0.26902	0.26902	1	16834000	+		28309	12387	14025	14083	32476	32476					0.17864814404811113
RIWTWKIL	8	Unmodified	_RIWTWKIL_					0	0	0		ENST00000366919.6_1_6:161537898-161538120:+|nuORF	ENST00000366919.6_1_6:161537898-161538120:+|nuORF	ENST00000366919.6_1_6:161537898-161538120:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3437377810478	2	558.339844	1114.66514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.54	1	103.6	103.1	104.1	0.059502								0	0	0	1.0178	1	43452	43452		0.69038	0.16561	1				28310	6053	14026	14084	32477	32477					0.11238909227495242
RIWVFRLKRRK	11	Unmodified	_RIWVFRLKRRK_					0	0	0		ENSG00000171320|ENST00000305188|ESCO2;nc|ENSG00000171320|Q56NI9-2|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	779.5013305544853	2	779.501878	1556.9892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.787	1	96.189	95.689	96.689	0.40208								0	0	0	0.63775	1	40300	40300		0	0	1				28311	4184	14027	14085	32478	32478					0.23298854715267225
RIYIKHPHLF	10	Unmodified	_RIYIKHPHLF_					0	0	0		ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	ENSG00000101457|ENST00000372622|DNTTIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.6974670290947	4	331.697567	1322.76116	1.018	0.00033766	1.2044	0.00039949	2.2224	0.00073715	331.6977428660736	38.847	0.65912	39.156	38.857	39.516	0.30857					42	21	3	0	0	0	0.89803	2	16267	16267;16312		0.69767	0.07084	1	3378300			28312	1353	14028	14086	32479;32480	32479					0.11269057067602262
RIYKSILYMG	10	Unmodified	_RIYKSILYMG_					0	0	0			REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	REV__ENST00000462436.1_1_7:97484616-97487685:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3491088747978	2	622.347009	1242.67946	3.2406	0.0020168	-1.8926	-0.0011779	1.348	0.00083891	622.3458638123129	90.743	0.57442	92.108	91.864	92.438	1.366					65	17	5	0	0	0	0.82019	1	38165	38165		10.074	1.4806	1	32754000	+		28313	8719	14029	14087	32481	32481					0.06783193593491887
RIYPFLLMV	9	Unmodified	_RIYPFLLMV_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	575.7938720583916	2	576.335913	1150.65727	1.7369	0.001001	1.6065	0.00092587	3.3433	0.0019269	576.3371734527926	83.726	0.28011	85.364	85.195	85.475	1.6379					12	8	2	0	0	0	0.11518	1	35113	35113		7.2892	1.5574	1	698330			28314	3111	14030	14088	32482	32482					0.08797013915727803
RKAGVAHS	8	Unmodified	_RKAGVAHS_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2396423220634	2	413.238119	824.461684	2.355	0.00097317	-0.15076	-6.23E-05	2.2042	0.00091087	413.23785758739774	69.793	0.64928	71.147	70.717	71.366	1.3536					39	20	3	0	0	0	0.89051	1	29272	29272		2.3027	0	1	2018100			28315	1222	14031	14089	32483	32483					0.04243184505889985
RKAGVAHS	8	Unmodified	_RKAGVAHS_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2390319705009	2	413.238119	824.461684	2.147	0.0008872	0.29856	0.00012338	2.4455	0.0010106	413.23798342370964	69.468	0.53557	71.321	71.041	71.577	1.853					36	16	3	0	0	0	0.88663	1	29114	29114		4.756	0.42677	1	1671100			28316	1222	14031	14089	32484	32484					0.04243184505889985
RKAGVAHS	8	Unmodified	_RKAGVAHS_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2393066287041	2	413.238119	824.461684	1.5009	0.00062023	-0.85831	-0.00035469	0.64258	0.00026554	413.23797841867287	70.48	0.42828	72.318	72.104	72.532	1.8378					31	13	3	0	0	0	0.89051	1	29525	29525		2.3027	0	1	4427700			28317	1222	14031	14089	32485	32485					0.04243184505889985
RKAGVAHS	8	Unmodified	_RKAGVAHS_					0	0	0		nc|ENSG00000099917|Q96RN5-3|MED15;nc|ENSG00000099917|Q96RN5-2|MED15;ENSG00000099917|ENST00000263205|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	nc|ENSG00000099917|Q96RN5-3|MED15	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	413.238119	824.461684	0.46811	0.00019344	1.3896	0.00057425	1.8577	0.00076769	413.2387038087496	71.107	0.71988	71.107	70.537	71.257	0	-0.075992	0.00066534	NaN	4.756	45	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2872700			28318	1222	14031	14089							0.04243184505889985
RKAKGHKG	8	Unmodified	_RKAKGHKG_					0	0	0		ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	ENSG00000198780|ENST00000687041|FAM169A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	441.1545898318291	2	441.275035	880.535518	3.3864	0.0014944	1.1781	0.00051985	4.5645	0.0020142	441.27549618238044	107.71	0.2354	107.87	107.7	107.93	0.15781					19	12	2	0	0	0	2.3239	1	46294	46294		0	0	1	42570000			28319	5081	14032	14090	32486	32486					0.09047152668233593
RKAKTIPV	8	Unmodified	_RKAKTIPV_					0	0	0		nc|ENSG00000165458|O15357-2|INPPL1;ENSG00000165458|ENST00000298229|INPPL1	nc|ENSG00000165458|O15357-2|INPPL1	nc|ENSG00000165458|O15357-2|INPPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5367614626884	3	304.871155	911.591636	-2.9706	-0.00090566	1.5683	0.00047812	-1.4024	-0.00042754	304.8718239546971	24.689	0.42781	24.689	24.582	25.01	0					30	13	3	0	0	0	2.3239	1	10340	10340		5.7319	2.4505	1	2448600			28320	3840	14033	14091	32487	32487					0.1323036078504174
RKAKTIPV	8	Unmodified	_RKAKTIPV_					0	0	0		nc|ENSG00000165458|O15357-2|INPPL1;ENSG00000165458|ENST00000298229|INPPL1	nc|ENSG00000165458|O15357-2|INPPL1	nc|ENSG00000165458|O15357-2|INPPL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5369445681572	3	304.871155	911.591636	0.21663	6.6044E-05	0.2194	6.6887E-05	0.43602	0.00013293	304.87117663585394	26.049	0.93488	26.301	25.951	26.886	0.25197					54	30	2	0	0	0	2.3239	1	10754	10754		5.7319	2.1354	1	3651800			28321	3840	14033	14091	32488	32488					0.1323036078504174
RKAKTRLAR	9	Unmodified	_RKAKTRLAR_					0	0	0			REV__ENST00000323534.4_2_3:152881030-152881288:+|nuORF	REV__ENST00000323534.4_2_3:152881030-152881288:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.2456237673759	3	367.243874	1098.70979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.886	1	37.188	36.688	37.688	0.30197								0	0	0	0.42693	1	15512	15512		2.2828	1.6559	1		+		28322	12418	14034	14092	32489	32489					0.1643873309353694
RKALVLLHS	9	Unmodified	_RKALVLLHS_					0	0	0			REV__ENST00000463727.1_1_10:129868414-129869560:+|nuORF	REV__ENST00000463727.1_1_10:129868414-129869560:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2274047732353	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.152	1	62.152	61.652	62.652	0								0	0	0	0.42693	1	25912	25912		1.0715	0.3738	1		+		28323	13219	14035	14093	32490	32490					0.13889721222130902
RKCKKRSKSS	10	Unmodified	_RKCKKRSKSS_					0	0	0			REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3593627810478	2	604.356231	1206.69791	2.8873	0.001745	0.33824	0.00020442	3.2256	0.0019494	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	0.89803	1	36444	36444		1.4819	0	1	89814000	+		28324	13365	14036	14094	32491	32491					0.10282748288068433
RKCKKRSKSS	10	Unmodified	_RKCKKRSKSS_					0	0	0			REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3597289919853	2	604.356231	1206.69791	3.6852	0.0022272	2.0751	0.0012541	5.7603	0.0034813	604.3572037593373	86.737	0.51268	87.829	87.606	88.118	1.0918					59	18	4	0	0	0	0.89803	1	36493	36493		1.4819	0	1	23248000	+		28325	13365	14036	14094	32492	32492					0.10282748288068433
RKCKKRSKSS	10	Unmodified	_RKCKKRSKSS_					0	0	0			REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	REV__ENST00000481848.6_2_6:127836176-127837095:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3593627810478	2	604.356231	1206.69791	4.1888	0.0025315	1.4229	0.00085992	5.6117	0.0033914	604.356793904882	86.369	0.59431	87.916	87.638	88.232	1.547					72	21	4	0	0	0	0.89803	1	36427	36427		1.4819	0	1	29157000	+		28326	13365	14036	14094	32493	32493					0.10282748288068433
RKCRWWRPC	9	Unmodified	_RKCRWWRPC_					0	0	0			REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881713747978	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.26	1	110.31	109.81	110.81	0.048843								0	0	0	0.42693	1	47575	47575		0	0	1		+		28327	14114	14037	14095	32494	32494					0.005385737928918388
RKCRWWRPC	9	Unmodified	_RKCRWWRPC_					0	0	0			REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881103396416	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.13	1	111.17	110.67	111.67	0.047043								0	0	0	0.42693	1	47919	47919		0	0	1		+		28328	14114	14037	14095	32495	32495					0.005385737928918388
RKCRWWRPC	9	Unmodified	_RKCRWWRPC_					0	0	0			REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	REV__ENST00000599470.5_2_19:39616427-39616532:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879577517509	3	430.886816	1289.63862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.33	1	111.5	111	112	0.16445								0	0	0	0.42693	1	48319	48319		0	0	1		+		28329	14114	14037	14095	32496	32496					0.005385737928918388
RKDAELYLL	9	Unmodified	_RKDAELYLL_					0	0	0		nc|ENSG00000111231|Q9UHW5-3|GPN3;ENST00000549963.1_1_12:110906141-110906465:-|nuORF	nc|ENSG00000111231|Q9UHW5-3|GPN3	nc|ENSG00000111231|Q9UHW5-3|GPN3	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2169677615166	3	374.21688	1119.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.19	1	105.24	104.74	105.74	0.056801								0	0	0	0.42693	1	44535	44535		1.0715	0	1				28330	7853	14038	14096	32497	32497					0.07377987540121467
RKDKKKLRRLL	11	Unmodified	_RKDKKKLRRLL_					0	0	0		ENSG00000196284|ENST00000371459|SUPT3H;nc|ENSG00000196284|O75486-4|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	ENSG00000196284|ENST00000371459|SUPT3H	MSMS	GG20161007_CRH_Patient100_W632_02	4	727.6353637576103	2	727.493719	1452.97288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.97	1	119.13	118.63	119.63	0.16237								0	0	0	0.63775	1	51347	51347		0	0	1				28331	4931	14039	14097	32498	32498					0.2645172875854769
RKEALLTMRPR	11	Unmodified	_RKEALLTMRPR_					0	0	0		OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant;OVGP1|p.K271Qfs*4|1|0.41|ENSG00000085465|chr1:111421369-111421370|-/A|frameshift_variant;ENSG00000085465|ENST00000369732|OVGP1	OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant	OVGP1|p.G202Efs*13|1|0.03|ENSG00000085465|chr1:111422930-111422931|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	458.2632934451103	3	457.606484	1369.79762	2.7592	0.0012626	3.0735	0.0014064	5.8327	0.0026691	457.6075827949554	86.334	0.71906	86.334	85.978	86.697	0					47	23	3	0	0	0	0.14606	1	36135	36135		0.40827	0.24894	1	1149000			28332	1061	14040	14098	32499	32499					0.12751565901976392
RKEDRKEQKLR	11	Unmodified	_RKEDRKEQKLR_					0	0	0			REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B	REV__nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9606201052666	3	495.958462	1484.85356	2.1412	0.001062	1.7667	0.00087619	3.9079	0.0019381	495.9594363954887	88.671	1.1485	88.671	88.029	89.178	0					55	36	2	0	0	0	1.0396	1	36893	36893		0.073264	0	1	1119600	+		28333	9625	14041	14099	32500	32500					0.13052490343147838
RKEQLPHFRL	10	Unmodified	_RKEQLPHFRL_					0	0	0			REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.6968871951103	4	331.696561	1322.75714	-0.58704	-0.00019472	2.9646	0.00098334	2.3775	0.00078862	331.6973209269109	37.426	0.21388	38.71	38.601	38.815	1.284					24	15	2	0	0	0	0.89588	1	15718	15718		1.9064	0.69154	1	5073100	+		28334	14157	14042	14100	32501	32501					0.10866967573883812
RKEQLPHFRL	10	Unmodified	_RKEQLPHFRL_					0	0	0			REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.6967346072197	4	331.696561	1322.75714	0.20423	6.7744E-05	0.96824	0.00032116	1.1725	0.00038891	331.6966201577436	36.838	0.27945	38.655	38.458	38.738	1.8176					34	19	3	0	0	0	0.89588	1	15460	15460		1.9064	0.69154	1	3096000	+		28335	14157	14042	14100	32502	32502					0.10866967573883812
RKEQLPHFRL	10	Unmodified	_RKEQLPHFRL_					0	0	0			REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	331.696561	1322.75714	-0.58704	-0.00019472	2.9646	0.00098334	2.3775	0.00078862	331.6973209269109	37.426	0.21388	38.71	38.601	38.815	1.284	0.027478	0.0015111	NaN	1.9064	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5073100	+		28336	14157	14042	14100							0.10866967573883812
RKEQLPHFRL	10	Unmodified	_RKEQLPHFRL_					0	0	0			REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	REV__EXT1|p.R83Pfs*106|1|0.17|ENSG00000182197|chr8:118110799-118110800|-/G|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	331.696561	1322.75714	0.20423	6.7744E-05	0.96824	0.00032116	1.1725	0.00038891	331.6966201577436	36.838	0.27945	38.655	38.458	38.738	1.8176	-0.027478	-0.0011376	NaN	1.9064	34	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3096000	+		28337	14157	14042	14100							0.10866967573883812
RKERWFITSM	10	Unmodified	_RKERWFITSM_					0	0	0			REV__ENST00000407073.5_2_2:148990944-149215877:+|nuORF	REV__ENST00000407073.5_2_2:148990944-149215877:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9098083376884	3	451.908052	1352.70233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.117	1	92.307	91.807	92.807	0.19042								0	0	0	0.66254	1	38574	38574		0.15932	0	1		+		28338	12906	14043	14101	32503	32503					0.04008212710959924
RKFFHLWRRI	10	Unmodified	_RKFFHLWRRI_					0	0	0		ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.9606506228447	3	486.957957	1457.85204	2.3899	0.0011638	2.7043	0.0013169	5.0942	0.0024806	486.9592425722195	88.983	1.9506	88.983	88.274	90.225	0					145	61	3	0	0	0	0.89803	1	37264	37264		0.15932	0.01943	1	2426300			28339	6105	14044	14102	32504	32504					0.14142945835715182
RKFFHLWRRI	10	Unmodified	_RKFFHLWRRI_					0	0	0		ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	729.9367553591728	2	729.933297	1457.85204	2.5876	0.0018888	2.4721	0.0018044	5.0597	0.0036932	729.9350352674447	89.038	1.2216	89.038	88.304	89.526	0					87	38	3	0	0	0	0.89803	1	37281	37281		0	0	1	1478000			28340	6105	14044	14102	32505	32505					0.14142945835715182
RKFFHLWRRI	10	Unmodified	_RKFFHLWRRI_					0	0	0		ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.9606506228447	3	486.957957	1457.85204	3.3514	0.001632	2.1959	0.0010693	5.5473	0.0027013	486.9590517720984	88.921	2.1704	89.144	88.217	90.387	0.2236					163	67	3	0	0	0	0.89803	3	37219	37219;37271;37537		0.15932	0.064481	1	2885200			28341	6105	14044	14102	32506;32507;32508	32506					0.14142945835715182
RKFFHLWRRI	10	Unmodified	_RKFFHLWRRI_					0	0	0		ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	ENST00000370008.3_1_1:109351697-109351763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.9616882205009	3	486.957957	1457.85204	4.6615	0.00227	2.3673	0.0011528	7.0288	0.0034227	486.9591955423125	87.983	1.5199	89.43	88.594	90.113	1.4467					120	47	3	0	0	0	0.89803	1	37129	37129		0.15932	0.064481	1	2217100			28342	6105	14044	14102	32509	32509					0.14142945835715182
RKFIKLAAHLK	11	Unmodified	_RKFIKLAAHLK_					0	0	0		ENST00000488250.5_1_12:48131352-48135452:-|nuORF;nc|ENSG00000079337|O95398-3|RAPGEF3;ENSG00000079337|ENST00000449771|RAPGEF3	ENST00000488250.5_1_12:48131352-48135452:-|nuORF	ENST00000488250.5_1_12:48131352-48135452:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	662.9312621951103	2	662.932431	1323.85031	2.6741	0.0017728	-3.2119	-0.0021293	-0.53774	-0.00035649	662.9291583581804	105.9	0.12132	105.95	105.88	106	0.05455					14	5	3	0	0	0	1.0362	1	45000	45000		1.3295	0	1	51330000			28343	991	14045	14103	32510	32510					0.20133892027115508
RKFQPERYKLW	11	Unmodified	_RKFQPERYKLW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;KDM4A|p.S510Ifs*2|1|0.07|ENSG00000066135|chr1:43671668-43671669|-/A|frameshift_variant;KDM4A|p.S510Qfs*4|1|0.07|ENSG00000066135|chr1:43671665-43671666|-/AGCCAGG|frameshift_variant;KDM4A|p.S510Hfs*85|1|0.05|ENSG00000066135|chr1:43671666-43671667|-/CCCATTCCCCGCCCATGTTC|frameshift_variant;KDM4A|p.R605Pfs*13|1|0.12|ENSG00000066135|chr1:43683757-43683758|-/C|frameshift_variant	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6260253787041	3	517.624532	1549.85177	2.8085	0.0014538	-0.61246	-0.00031702	2.1961	0.0011368	517.6247851127961	91.558	1.0359	91.748	90.978	92.014	0.19041					71	31	3	0	0	0	1.0388	1	38277	38277		0.50596	0	1	1042500			28344	800	14046	14104	32511	32511					0.09883481325232424
RKFQPERYKLW	11	Unmodified	_RKFQPERYKLW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;KDM4A|p.S510Ifs*2|1|0.07|ENSG00000066135|chr1:43671668-43671669|-/A|frameshift_variant;KDM4A|p.S510Qfs*4|1|0.07|ENSG00000066135|chr1:43671665-43671666|-/AGCCAGG|frameshift_variant;KDM4A|p.S510Hfs*85|1|0.05|ENSG00000066135|chr1:43671666-43671667|-/CCCATTCCCCGCCCATGTTC|frameshift_variant;KDM4A|p.R605Pfs*13|1|0.12|ENSG00000066135|chr1:43683757-43683758|-/C|frameshift_variant	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6276122927666	3	517.624532	1549.85177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.152	1	81.442	80.942	81.942	0.29056								0	0	0	0.63775	1	33925	33925		0.50596	0	1				28345	800	14046	14104	32512	32512					0.09883481325232424
RKFQPERYKLW	11	Unmodified	_RKFQPERYKLW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;KDM4A|p.S510Ifs*2|1|0.07|ENSG00000066135|chr1:43671668-43671669|-/A|frameshift_variant;KDM4A|p.S510Qfs*4|1|0.07|ENSG00000066135|chr1:43671665-43671666|-/AGCCAGG|frameshift_variant;KDM4A|p.S510Hfs*85|1|0.05|ENSG00000066135|chr1:43671666-43671667|-/CCCATTCCCCGCCCATGTTC|frameshift_variant;KDM4A|p.R605Pfs*13|1|0.12|ENSG00000066135|chr1:43683757-43683758|-/C|frameshift_variant	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6275512576103	3	517.624532	1549.85177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.96	1	113	112.5	113.5	0.044189								0	0	0	0.63775	1	48665	48665		2.6312	1.3016	1				28346	800	14046	14104	32513	32513					0.09883481325232424
RKFQPERYKLW	11	Unmodified	_RKFQPERYKLW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;KDM4A|p.S510Ifs*2|1|0.07|ENSG00000066135|chr1:43671668-43671669|-/A|frameshift_variant;KDM4A|p.S510Qfs*4|1|0.07|ENSG00000066135|chr1:43671665-43671666|-/AGCCAGG|frameshift_variant;KDM4A|p.S510Hfs*85|1|0.05|ENSG00000066135|chr1:43671666-43671667|-/CCCATTCCCCGCCCATGTTC|frameshift_variant;KDM4A|p.R605Pfs*13|1|0.12|ENSG00000066135|chr1:43683757-43683758|-/C|frameshift_variant	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6277953982353	3	517.624532	1549.85177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.63	1	113.67	113.17	114.17	0.044189								0	0	0	0.63775	1	48936	48936		0.50596	0.17668	1				28347	800	14046	14104	32514	32514					0.09883481325232424
RKFQPERYKLW	11	Unmodified	_RKFQPERYKLW_					0	0	0		ENSG00000066135|ENST00000372396|KDM4A;PCCB-KDM4A|1|fusion;PCCB-KDM4A|2|fusion;KDM4A|p.S510Ifs*2|1|0.07|ENSG00000066135|chr1:43671668-43671669|-/A|frameshift_variant;KDM4A|p.S510Qfs*4|1|0.07|ENSG00000066135|chr1:43671665-43671666|-/AGCCAGG|frameshift_variant;KDM4A|p.S510Hfs*85|1|0.05|ENSG00000066135|chr1:43671666-43671667|-/CCCATTCCCCGCCCATGTTC|frameshift_variant;KDM4A|p.R605Pfs*13|1|0.12|ENSG00000066135|chr1:43683757-43683758|-/C|frameshift_variant	ENSG00000066135|ENST00000372396|KDM4A	ENSG00000066135|ENST00000372396|KDM4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.6244384646416	3	517.624532	1549.85177	0.94285	0.00048804	-1.7387	-0.0009	-0.79586	-0.00041196	517.6245848279103	51.095	0.45379	52.489	52.226	52.68	1.3938					24	14	2	0	0	0	1.0191	1	21385	21385		2.6312	1.1761	1	1607200			28348	800	14046	14104	32515	32515					0.09883481325232424
RKGAVLGG	8	Unmodified	_RKGAVLGG_					0	0	0			REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	757.4725219607353	1	757.467898	756.460622	1.3443	0.0010183	3.8163	0.0028907	5.1606	0.003909	757.4705413818845	106.29	0.15427	106.29	106.21	106.36	0					14	7	3	0	0	0	0.89178	1	45330	45330		0.69038	0	1	26637000	+		28349	12244	14047	14105	32516	32516					0.07264970137009641
RKGAVLGG	8	Unmodified	_RKGAVLGG_					0	0	0			REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.4711791872978	1	757.467898	756.460622	2.4929	0.0018883	2.9278	0.0022178	5.4208	0.0041061	757.4695342137642	108.46	0.17216	108.62	108.59	108.77	0.15898					15	8	3	0	0	0	0.89178	1	46937	46937		0.69038	0	1	51876000	+		28350	12244	14047	14105	32517	32517					0.07264970137009641
RKGAVLGG	8	Unmodified	_RKGAVLGG_					0	0	0			REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	REV__ENST00000275230.5_1_6:134373634-134373700:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	757.467898	756.460622	1.3443	0.0010183	3.8163	0.0028907	5.1606	0.003909	757.4705413818845	106.29	0.15427	106.29	106.21	106.36	0	-0.04365	0.0012113	NaN	0.69038	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26637000	+		28351	12244	14047	14105							0.07264970137009641
RKGDGENS	8	Unmodified	_RKGDGENS_					0	0	0		ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	431.7062560915947	2	431.704306	861.394058	2.5613	0.0011057	0.53619	0.00023148	3.0975	0.0013372	431.70480095408544	77.749	0.55669	79.03	78.791	79.348	1.2809					48	17	4	0	0	0	0.79422	2	32632	32586;32632		21.747	3.6117	1	23494000			28352	2186	14048	14106	32518;32519	32519					-0.0421831021556045
RKGDGENS	8	Unmodified	_RKGDGENS_					0	0	0		ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	431.7057678103447	2	431.704306	861.394058	2.7464	0.0011856	-0.94912	-0.00040974	1.7973	0.00077589	431.70442340697514	78.409	0.54692	79.676	79.392	79.939	1.2668					52	17	4	0	0	0	0.79422	2	32870	32870;32920		21.747	3.6117	1	7043300			28353	2186	14048	14106	32520;32521	32520					-0.0421831021556045
RKGDGENS	8	Unmodified	_RKGDGENS_					0	0	0		ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	431.7057678103447	2	431.704306	861.394058	1.2172	0.00052547	-0.47051	-0.00020312	0.74669	0.00032235	431.7044362894219	77.494	0.49039	79.246	78.946	79.437	1.7514					44	15	4	0	0	0	0.79422	2	32462	32462;32501		21.747	3.6117	1	7336500			28354	2186	14048	14106	32522;32523	32522					-0.0421831021556045
RKGDGENS	8	Unmodified	_RKGDGENS_					0	0	0		ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	431.7052490115166	2	431.704306	861.394058	1.9198	0.00082879	-0.68118	-0.00029407	1.2386	0.00053472	431.7045876280456	78.105	0.59161	79.856	79.59	80.181	1.7514					54	18	4	0	0	0	0.79422	2	32727	32727;32774		21.747	2.4897	1	7819000			28355	2186	14048	14106	32524;32525	32524					-0.0421831021556045
RKGGGVIA	8	Unmodified	_RKGGGVIA_					0	0	0			REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	757.4715453982353	1	757.467898	756.460622	2.7298	0.0020677	-0.037483	-2.8392E-05	2.6923	0.0020394	757.4676891095568	107.94	0.22533	107.99	107.86	108.08	0.050644					32	11	4	0	0	0	0.89176	1	46261	46261		0.79363	0	1	301770000	+	+	28356	8380	14049	14107	32526	32526					0.07264970136975535
RKGGGVIA	8	Unmodified	_RKGGGVIA_					0	0	0			REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	757.467898	756.460622	2.7298	0.0020677	-0.037483	-2.8392E-05	2.6923	0.0020394	757.4676891095568	107.94	0.22533	107.99	107.86	108.08	0.050644	-0.0082109	2.173E-05	NaN	0.79363	32	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	301770000	+	+	28357	8380	14049	14107							0.07264970136975535
RKGGGVIA	8	Unmodified	_RKGGGVIA_					0	0	0			REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	757.467898	756.460622	2.4928	0.0018882	-0.21722	-0.00016454	2.2756	0.0017237	757.4672844890017	107.89	0.19456	108.05	107.95	108.15	0.15781	0.047403	-0.00011442	NaN	0.79363	37	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	716950000	+	+	28358	8380	14049	14107							0.07264970136975535
RKGGGVIA	8	Unmodified	_RKGGGVIA_					0	0	0			REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	REV__KRT4|p.E259Gfs*7|1|0.05|ENSG00000170477|chr12:52809440-52809441|CT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	757.467898	756.460622	2.7444	0.0020788	-0.9986	-0.00075641	1.7458	0.0013224	757.4668006453381	107.84	0.20335	108	107.92	108.12	0.15795	-0.00022334	-0.00070629	NaN	0.79363	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1038399999.9999999	+	+	28359	8380	14049	14107							0.07264970136975535
RKGGKPSPIL	10	Unmodified	_RKGGKPSPIL_					0	0	0		HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|170|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|170|3|sense	HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|170|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8337280154228	2	526.832383	1051.65021	3.3481	0.0017639	-0.80686	-0.00042508	2.5412	0.0013388	526.8315615757318	94.087	0.38311	95.276	95.048	95.431	1.1887					25	11	3	0	0	0	0.85604	1	39606	39606		6.2058	0.97511	1	1519000			28360	7618	14050	14108	32527	32527					0.12645417359499334
RKGLPRRPRGS	11	Unmodified	_RKGLPRRPRGS_					0	0	0			REV__ENST00000531339.5_1_11:65414854-65417043:+|nuORF	REV__ENST00000531339.5_1_11:65414854-65417043:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2651244997978	3	427.26545	1278.77452	1.0355	0.00044245	-1.2983	-0.0005547	-0.26272	-0.00011225	427.26482516564323	42.65	1.0747	42.65	42.384	43.459	0					143	34	5	0	0	0	1.0282	1	17954	17954		2.084	0.75432	1	51340000	+		28361	13709	14051	14109	32528	32528					0.14628307899556603
RKGLPRRPRGS	11	Unmodified	_RKGLPRRPRGS_					0	0	0			REV__ENST00000531339.5_1_11:65414854-65417043:+|nuORF	REV__ENST00000531339.5_1_11:65414854-65417043:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7018920779228	4	320.700906	1278.77452	1.0696	0.00034303	-1.7637	-0.00056561	-0.69404	-0.00022258	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	0.99899	2	16884	16845;16884		3.8459	1.2147	1	367210000	+		28362	13709	14051	14109	32529;32530	32530					0.14628307899556603
RKGPIPVRR	9	Unmodified	_RKGPIPVRR_					0	0	0		ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2386047244072	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.123	1	92.105	91.605	92.605	0.98157								0	0	0	0.42693	1	38381	38381		0.23584	0	1				28363	5782	14052	14110	32531	32531					0.15259348064842015
RKGPIPVRR	9	Unmodified	_RKGPIPVRR_					0	0	0		ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2387878298759	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.466	1	92.817	92.317	93.317	1.351								0	0	0	0.42693	1	38518	38518		0.23584	0	1				28364	5782	14052	14110	32532	32532					0.15259348064842015
RKGPIPVRR	9	Unmodified	_RKGPIPVRR_					0	0	0		ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2392455935478	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.598	1	92.925	92.425	93.425	1.3269								0	0	0	0.42693	1	38572	38572		1.0715	0	1				28365	5782	14052	14110	32533	32533					0.15259348064842015
RKGPIPVRR	9	Unmodified	_RKGPIPVRR_					0	0	0		ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	ENST00000307271.3_1_7:150171706-150174432:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2399169802666	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.716	1	93.043	92.543	93.543	1.3269								0	0	0	0.42693	1	38619	38619		1.0715	0	1				28366	5782	14052	14110	32534	32534					0.15259348064842015
RKGVPVKV	8	Unmodified	_RKGVPVKV_					0	0	0		chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	441.2992736697197	2	441.797812	881.581071	3.3846	0.0014953	4.0556	0.0017918	7.4402	0.0032871	441.79985868030656	109.7	0.55444	109.86	109.71	110.26	0.16132					29	18	2	0	0	0	2.3239	1	47717	47717		0.69038	0	1	1358800			28367	296	14053	14111	32535	32535					0.13554378130606892
RKGVPVKV	8	Unmodified	_RKGVPVKV_					0	0	0		chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	chr9:130458589-130479716|163|311.8|0.0|16.41|+|2|ASS1,ASS1|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	441.797812	881.581071	3.3546	0.0014821	3.9303	0.0017364	7.285	0.0032185	441.7996704827483	109.69	0.51357	109.84	109.67	110.18	0.15228	-0.0077136	-3.161E-05	NaN	0.69038	26	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1756200			28368	296	14053	14111							0.13554378130606892
RKGWRRAP	8	Unmodified	_RKGWRRAP_					0	0	0		ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8748351931572	3	342.873782	1025.59952	0.35085	0.0001203	2.8013	0.00096048	3.1521	0.0010808	342.8746446308779	32.719	0.35339	34.544	34.303	34.656	1.8246					47	17	4	0	0	0	0.88663	1	13710	13710		3.2813	0	1	11493000			28369	6846	14054	14112	32536	32536					0.08773932825192787
RKGWRRAP	8	Unmodified	_RKGWRRAP_					0	0	0		ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	ENST00000483825.5_1_1:167404074-167487702:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8747436404228	3	342.873782	1025.59952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.251	1	36.074	35.574	36.574	1.8227								0	0	0	1.0178	1	14362	14362		3.2813	0.99853	1				28370	6846	14054	14112	32537	32537					0.08773932825192787
RKHFPDNPK	9	Unmodified	_RKHFPDNPK_					0	0	0			REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.8099243044853	2	569.809439	1137.60433	0.83086	0.00047343	-2.0033	-0.0011415	-1.1725	-0.00066809	569.8082247481993	26.727	0.21238	26.988	26.896	27.108	0.26173					11	6	2	0	0	0	0.7849	1	11177	11177		3.9444	0.94915	1	676200	+		28371	12798	14055	14113	32538	32538					0.04102772177270708
RKHFPDNPK	9	Unmodified	_RKHFPDNPK_					0	0	0			REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	569.809439	1137.60433	0.83086	0.00047343	-2.0033	-0.0011415	-1.1725	-0.00066809	569.8082247481993	26.727	0.21238	26.988	26.896	27.108	0.26173	-0.068563	-0.00076075	NaN	3.9444	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	676200	+		28372	12798	14055	14113							0.04102772177270708
RKHFPDNPK	9	Unmodified	_RKHFPDNPK_					0	0	0			REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	REV__ENST00000392547.6_1_2:175425125-175425233:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	569.809439	1137.60433	1.3415	0.00076442	-0.70419	-0.00040126	0.63734	0.00036316	569.8088400378805	25.558	0.21469	26.817	26.71	26.925	1.2594	-0.23997	0.00071978	NaN	3.9444	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515390	+		28373	12798	14055	14113							0.04102772177270708
RKHKRRRRKQ	10	Unmodified	_RKHKRRRRKQ_					0	0	0		nc|ENSG00000107404|O14640-2|DVL1;ENSG00000107404|ENST00000378888|DVL1	nc|ENSG00000107404|O14640-2|DVL1	nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.9811584353447	3	483.646776	1447.9185	0.76652	0.00037073	-0.073533	-3.5564E-05	0.69299	0.00033516	483.646612066779	31.477	1.0673	32.758	32.375	33.442	1.2813					111	35	5	0	0	0	0.89803	1	13099	13099		0.15932	0	1	25713000			28374	1600	14056	14114	32539	32539					0.21245574450313143
RKIAILAG	8	Unmodified	_RKIAILAG_					0	0	0			REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2863342165947	2	421.284537	840.554522	3.2293	0.0013605	3.9704	0.0016727	7.1997	0.0030331	421.28574896118266	109.46	0.4486	109.62	109.38	109.83	0.1548					43	18	3	0	0	0	0.89176	2	47431	47431;47488		0.79363	0	1	21735000	+		28375	15121	14057	14115	32540;32541	32540					0.12786689239283078
RKIAILAG	8	Unmodified	_RKIAILAG_					0	0	0			REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	421.284537	840.554522	0.30125	0.00012691	6.0808	0.0025617	6.382	0.0026887	421.2848257741278	109.51	0.6271	109.51	109.28	109.9	0	-0.06701	0.0019915	NaN	0.79363	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4613900	+		28376	15121	14057	14115							0.12786689239283078
RKIAILAG	8	Unmodified	_RKIAILAG_					0	0	0			REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	421.284537	840.554522	3.0339	0.0012782	1.7883	0.00075339	4.8223	0.0020315	421.2848929450654	109.51	0.32501	109.56	109.45	109.78	0.048843	-0.023422	-0.0016253	NaN	0.79363	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2079700	+		28377	15121	14057	14115							0.12786689239283078
RKIAILAG	8	Unmodified	_RKIAILAG_					0	0	0			REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	421.284537	840.554522	3.0788	0.0012971	4.2127	0.0017748	7.2916	0.0030718	421.2860338305127	109.48	0.47181	109.64	109.39	109.87	0.15899	0.053794	0.00041747	NaN	0.79363	42	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26979000	+		28378	15121	14057	14115							0.12786689239283078
RKIAILAG	8	Unmodified	_RKIAILAG_					0	0	0			REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	REV__tr|A0A553SQ48|A0A553SQ48_NIACIDiadenylatecyclaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	421.284537	840.554522	3.2293	0.0013605	3.9704	0.0016727	7.1997	0.0030331	421.28574896118266	109.46	0.4486	109.62	109.38	109.83	0.1548	0.036639	0.00021327	NaN	0.79363	43	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21735000	+		28379	15121	14057	14115							0.12786689239283078
RKIFELVPS	9	Unmodified	_RKIFELVPS_					0	0	0			REV__tr|A0A7D6ZI08|A0A7D6ZI08_9CLOTPutativeaminohydrolaseSsnAOS=ClostridiumintestinaleOX=36845GN=ssnAPE=4SV=1	REV__tr|A0A7D6ZI08|A0A7D6ZI08_9CLOTPutativeaminohydrolaseSsnAOS=ClostridiumintestinaleOX=36845GN=ssnAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8253661990166	2	544.826766	1087.63898	2.2029	0.0012002	-3.6465	-0.0019867	-1.4436	-0.00078654	544.8244235386221	82.407	0.30675	82.687	82.52	82.827	0.2802					20	9	3	0	0	0	0.83753	1	34427	34427		1.8442	0	1	1229600	+		28380	15656	14058	14116	32542	32542					0.09866595265361866
RKIKHRSWWNQ	11	Unmodified	_RKIKHRSWWNQ_					0	0	0			REV__nc|ENSG00000134343|Q9BYT9-2|ANO3	REV__nc|ENSG00000134343|Q9BYT9-2|ANO3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.6223632693291	3	513.619892	1537.83785	2.0674	0.0010619	2.2803	0.0011712	4.3477	0.0022331	513.6209221481846	43.922	0.48053	43.922	43.651	44.131	0					45	14	4	0	0	0	1.0365	1	18311	18311		1.2148	0.70888	1	4094300	+		28381	9902	14059	14117	32543	32543					0.0904424861678308
RKILIRGLP	9	Unmodified	_RKILIRGLP_					0	0	0		nc|ENSG00000161847|Q8IY67-3|RAVER1;ENST00000592208.5_1_19:10439781-10444183:-|nuORF;nc|ENSG00000161847|Q8IY67|RAVER1;nc|ENSG00000161847|Q8IY67-2|RAVER1;ENSG00000161847|ENST00000617231|RAVER1	nc|ENSG00000161847|Q8IY67-3|RAVER1	nc|ENSG00000161847|Q8IY67-3|RAVER1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0691711306572	3	355.913354	1064.71823	0.43327	0.00015421	3.3659	0.001198	3.7991	0.0013522	355.91410973672885	22.78	0.6054	23.013	22.804	23.409	0.23306					39	19	3	0	0	0	0.11954	1	9479	9479		0.26902	0	1	1655700			28382	3599	14060	14118	32544	32544					0.18846287010183005
RKIMKLLLKIK	11	Unmodified	_RKIMKLLLKIK_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MSMS	GG20161007_CRH_Patient100_W632_01	3	692.4871093630791	2	692.483443	1382.95233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.783	1	15.552	15.052	16.052	0.76937								0	0	0	0.63775	1	6144	6144		2.9952	0	1				28383	1926	14061	14119	32545	32545					0.2761742205450446
RKIMKLLLKIK	11	Unmodified	_RKIMKLLLKIK_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MSMS	GG20161007_CRH_Patient100_W632_01	3	692.4861938357353	2	692.483443	1382.95233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.013	1	15.783	15.283	16.283	0.76937								0	0	0	0.63775	1	6239	6239		1.1933	0	1				28384	1926	14061	14119	32546	32546					0.2761742205450446
RKIREKHT	8	Unmodified	_RKIREKHT_					0	0	0		tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	534.3282348513603	2	534.325257	1066.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.29	1	104.35	103.85	104.85	0.059502								0	0	0	1.0178	1	43942	43942		2.3027	0.4585	1				28385	17312	14062	14120	32547	32547					0.10530764931218073
RKIREKHT	8	Unmodified	_RKIREKHT_					0	0	0		tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	534.3267089724541	2	534.325257	1066.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.25	1	104.41	103.91	104.91	0.16055								0	0	0	1.0178	1	44115	44115		2.3027	0.4585	1				28386	17312	14062	14120	32548	32548					0.10530764931218073
RKIREKHT	8	Unmodified	_RKIREKHT_					0	0	0		tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	tr|A0A7D7A6U7|A0A7D7A6U7_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=vanRPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	534.3280517458916	2	534.325257	1066.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.22	1	104.39	103.89	104.89	0.1731								0	0	0	1.0178	1	44042	44042		2.3027	0.4585	1				28387	17312	14062	14120	32549	32549					0.10530764931218073
RKKAAPVP	8	Unmodified	_RKKAAPVP_					0	0	0		ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	433.7821533083916	2	433.782162	865.549771	1.0972	0.00047595	-0.74207	-0.0003219	0.35514	0.00015405	433.7818644889677	39.66	2.1918	39.66	38.953	41.145	0					173	69	3	0	0	0	0.89008	1	16905	16905		2.5775	0.51773	1	12945000			28388	5460	14063	14121	32550	32550					0.11161805096503485
RKKAQTAPPL	10	Unmodified	_RKKAQTAPPL_					0	0	0		ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	ENSG00000167476|ENST00000300961|JSRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3446533083916	2	555.343115	1108.67168	3.0891	0.0017155	-2.8136	-0.0015625	0.27548	0.00015299	555.3423114310611	106.01	0.11661	106.17	106.1	106.21	0.15859					12	5	3	0	0	0	0.88022	1	45284	45284		3.5965	0	1	59979000			28389	3970	14064	14122	32551	32551					0.12168802388214317
RKKCTKKP	8	Unmodified	_RKKCTKKP_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-2|BBX	REV__nc|ENSG00000114439|Q8WY36-2|BBX	MSMS	GG20161007_CRH_Patient100_A02_02	2	330.2085143923759	3	330.207661	987.601155	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.789	1	23.022	22.522	23.522	0.23306								0	0	0	1.0178	1	9502	9502		0.45834	0	1		+		28390	9407	14065	14123	32552	32552					0.10685805798914316
RKKDRPRKHLT	11	Unmodified	_RKKDRPRKHLT_					0	0	0		nc|ENSG00000067066|P23497-3|SP100;SP100|p.V830Efs*20|1|0.06|ENSG00000067066|chr2:230541976-230541977|-/AACTCTCCAGAGTCTCTTT|frameshift_variant;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000067066|P23497-3|SP100	nc|ENSG00000067066|P23497-3|SP100	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.7245056033134	4	359.474563	1433.86915	-0.84322	-0.00030312	-0.67758	-0.00024357	-1.5208	-0.00054669	359.47424480500956	75.712	0.69347	75.712	75.471	76.164	0					51	21	3	0	0	0	1.0377	1	31565	31565		0.84494	0.39042	1	2345600			28391	818	14066	14124	32553	32553					0.16956821650865095
RKKDRPRKHLT	11	Unmodified	_RKKDRPRKHLT_					0	0	0		nc|ENSG00000067066|P23497-3|SP100;SP100|p.V830Efs*20|1|0.06|ENSG00000067066|chr2:230541976-230541977|-/AACTCTCCAGAGTCTCTTT|frameshift_variant;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000067066|P23497-3|SP100	nc|ENSG00000067066|P23497-3|SP100	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4746276736259	4	359.474563	1433.86915	2.3567	0.00084716	-3.5257	-0.0012674	-1.1691	-0.00042024	359.72408826898925	74.699	0.62016	75.023	74.709	75.329	0.32464					51	19	3	0	0	0	1.0351	2	31192	31192;31243		1.6479	1.1934	1	2694700			28392	818	14066	14124	32554;32555	32554					0.16956821650865095
RKKDRPRKHLT	11	Unmodified	_RKKDRPRKHLT_					0	0	0		nc|ENSG00000067066|P23497-3|SP100;SP100|p.V830Efs*20|1|0.06|ENSG00000067066|chr2:230541976-230541977|-/AACTCTCCAGAGTCTCTTT|frameshift_variant;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000067066|P23497-3|SP100	nc|ENSG00000067066|P23497-3|SP100	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7245971560478	4	359.474563	1433.86915	2.2965	0.00082554	-2.9004	-0.0010426	-0.60388	-0.00021708	359.47355612730314	73.445	0.63128	74.763	74.463	75.094	1.318					50	19	3	0	0	0	1.0351	2	30795	30795;30846		1.6479	1.1934	1	2330200			28393	818	14066	14124	32556;32557	32556					0.16956821650865095
RKKDRPRKHLT	11	Unmodified	_RKKDRPRKHLT_					0	0	0		nc|ENSG00000067066|P23497-3|SP100;SP100|p.V830Efs*20|1|0.06|ENSG00000067066|chr2:230541976-230541977|-/AACTCTCCAGAGTCTCTTT|frameshift_variant;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000067066|P23497-3|SP100	nc|ENSG00000067066|P23497-3|SP100	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4746276736259	4	359.474563	1433.86915	2.2526	0.00080975	-3.0271	-0.0010882	-0.77449	-0.00027841	359.4734619379466	72.839	0.66685	74.649	74.321	74.988	1.8101					53	20	3	0	0	0	1.0351	2	30531	30531;30583		1.6479	1.1934	1	1777000			28394	818	14066	14124	32558;32559	32558					0.16956821650865095
RKKEKHRQR	9	Unmodified	_RKKEKHRQR_					0	0	0			REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2	REV__nc|ENSG00000154864|Q9H5I5-2|PIEZO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1959106326103	4	317.196994	1264.75887	-0.88261	-0.00027996	-2.5672	-0.00081429	-3.4498	-0.0010943	317.19609650528974	34.745	0.40807	36.02	35.853	36.262	1.2746					87	40	3	0	0	0	0.81521	1	14654	14654		2.7352	0.30041	1	31566000	+		28395	10483	14067	14125	32560	32560					0.13708021382490188
RKKGVINR	8	Unmodified	_RKKGVINR_					0	0	0			REV__ENST00000593438.1_1_7:27155866-27156094:+|nuORF	REV__ENST00000593438.1_1_7:27155866-27156094:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2132751345634	3	324.213804	969.619582	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.191	1	55.596	55.096	56.096	1.4048								0	0	0	1.0178	1	22683	22683		0.40072	0	1		+		28396	14083	14068	14126	32561	32561					0.13355683765121285
RKKHKQKLREK	11	Unmodified	_RKKHKQKLREK_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1008788943291	4	370.490214	1477.93175	-0.95907	-0.00035533	0.034784	1.2887E-05	-0.92428	-0.00034244	370.49023294403713	33.561	0.97866	33.561	33.06	34.039	0					64	32	4	0	0	0	0.14606	1	14079	14079		0	0	1	3308000	+		28397	12015	14069	14127	32562	32562					0.21189967719078595
RKKIHRRVL	9	Unmodified	_RKKIHRRVL_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;RPL4-KIAA0317|1|fusion;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4109374880791	2	603.406915	1204.79928	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.41	1	108.57	108.07	109.07	0.15781								0	0	0	0.42693	1	46868	46868		0.6015	0.14316	1				28398	4331	14070	14128	32563	32563					0.20506987772932916
RKKIHRRVL	9	Unmodified	_RKKIHRRVL_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;RPL4-KIAA0317|1|fusion;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4113647341728	2	603.406915	1204.79928	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.51	1	108.66	108.16	109.16	0.15898								0	0	0	0.42693	1	46932	46932		0.6015	0.14316	1				28399	4331	14070	14128	32564	32564					0.20506987772932916
RKKIHRRVL	9	Unmodified	_RKKIHRRVL_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;RPL4-KIAA0317|1|fusion;ENST00000567229.5_1_15:66791747-66793486:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1205.813159167767	1	1205.80655	1204.79928	2.4837	0.0029948	3.2759	0.0039502	5.7596	0.006945	1205.8122407093394	108.01	0.085175	108.17	108.13	108.22	0.15795					18	11	2	0	0	0	0.84963	1	46546	46546		0.6015	0.14316	1	67955000			28400	4331	14070	14128	32565	32565					0.20506987772932916
RKKIVNIYKLK	11	Unmodified	_RKKIVNIYKLK_					0	0	0		nc|ENSG00000140600|Q99963-4|SH3GL3	nc|ENSG00000140600|Q99963-4|SH3GL3	nc|ENSG00000140600|Q99963-4|SH3GL3	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9677612185478	2	701.966471	1401.91839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.874	1	46.874	46.374	47.374	0								0	0	0	0.63775	1	19590	19590		2.9952	0	1				28401	7884	14071	14129	32566	32566					0.233507168871256
RKKKEKKEKKS	11	Unmodified	_RKKKEKKEKKS_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9724304080009	3	472.97182	1415.89363	2.2008	0.0010409	-1.2644	-0.00059802	0.93636	0.00044287	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0388	1	16559	16559		0.50596	0	1	10069000	+		28402	9785	14072	14130	32567	32567					0.20232037013715853
RKKKEKKEKKS	11	Unmodified	_RKKKEKKEKKS_					0	0	0			REV__nc|ENSG00000130396|P55196-2|AFDN	REV__nc|ENSG00000130396|P55196-2|AFDN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9727050662041	3	472.97182	1415.89363	2.2546	0.0010664	-1.1903	-0.00056297	1.0643	0.00050339	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	1.0402	1	16885	16885		0.094841	0	1	4678700	+		28403	9785	14072	14130	32568	32568					0.20232037013715853
RKKKEKKEKQ	10	Unmodified	_RKKKEKKEKQ_					0	0	0			REV__nc|ENSG00000120688|O75554-2|WBP4	REV__nc|ENSG00000120688|O75554-2|WBP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	443.9486572146416	3	443.949016	1328.82522	1.3391	0.00059449	-3.0137	-0.0013379	-1.6746	-0.00074343	443.947689289891	95.926	0.28997	95.926	95.773	96.063	0					29	9	4	0	0	0	0.89803	1	40135	40135		0.77653	0	1	35702000	+		28404	9575	14073	14131	32569	32569					0.17395792433876522
RKKKEKKHKR	10	Unmodified	_RKKKEKKHKR_					0	0	0			REV__nc|ENSG00000138398|Q13427-2|PPIG	REV__nc|ENSG00000138398|Q13427-2|PPIG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	341.4773742556572	4	342.228294	1364.88407	-0.084517	-2.8924E-05	3.1771	0.0010873	3.0926	0.0010584	342.22930466217616	26.863	0.48821	28.135	27.716	28.205	1.2715					20	15	2	0	0	0	0.1256	1	11187	11187		0.69767	0.2894	1	2248700	+		28405	10062	14074	14132	32570	32570					0.21622313518855663
RKKKEKKKKKK	11	Unmodified	_RKKKEKKKKKK_					0	0	0			REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	REV__ENST00000349223.9_1_16:68260779-68260980:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	486.3453246951103	3	486.343588	1456.00894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.902	1	96.902	96.402	97.402	0								0	0	0	0.63775	1	40510	40510		0	0	1		+		28406	12529	14075	14133	32571	32571					0.2991718593536916
RKKKENRRKW	10	Unmodified	_RKKKENRRKW_					0	0	0		nc|ENSG00000162542|Q5TGY1-2|TMCO4;ENSG00000162542|ENST00000294543|TMCO4	nc|ENSG00000162542|Q5TGY1-2|TMCO4	nc|ENSG00000162542|Q5TGY1-2|TMCO4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.2013732790947	3	476.960138	1427.85858	1.6315	0.00077814	-3.0379	-0.001449	-1.4065	-0.00067083	476.95799990203005	99.292	0.088943	99.292	99.23	99.319	0					4	2	2	0	0	0	0.12561	1	41555	41555		0.13989	0.04505	1	1175800			28407	3625	14076	14134	32572	32572					0.16176838996420884
RKKKENRRKW	10	Unmodified	_RKKKENRRKW_					0	0	0		nc|ENSG00000162542|Q5TGY1-2|TMCO4;ENSG00000162542|ENST00000294543|TMCO4	nc|ENSG00000162542|Q5TGY1-2|TMCO4	nc|ENSG00000162542|Q5TGY1-2|TMCO4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	476.960138	1427.85858	3.5349	0.001686	-6.184	-0.0029495	-2.6491	-0.0012635	476.95660583430623	99.244	0.09082	99.324	99.269	99.36	0.080376	0.016008	-0.0026894	NaN	0.13989	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444770			28408	3625	14076	14134							0.16176838996420884
RKKKIWVRRK	10	Unmodified	_RKKKIWVRRK_					0	0	0		Harlequin-int_dup204|chr5:139526721-139527362:+|1.653782137732163|0.1073174503437065|3.95|418.0|14|2|sense	Harlequin-int_dup204|chr5:139526721-139527362:+|1.653782137732163|0.1073174503437065|3.95|418.0|14|2|sense	Harlequin-int_dup204|chr5:139526721-139527362:+|1.653782137732163|0.1073174503437065|3.95|418.0|14|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4730102419853	2	699.470047	1396.92554	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.71	1	40.71	40.21	41.21	0								0	0	0	0.6624	1	17054	17054		0.40072	0	1				28409	7603	14077	14135	32573	32573					0.2429549427818074
RKKKKFIA	8	Unmodified	_RKKKKFIA_					0	0	0		tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.2361328005791	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.8	1	62.8	62.3	63.3	0								0	0	0	1.0178	1	26183	26183		0	0	1				28410	16891	14078	14136	32574	32574					0.1729861546440361
RKKKKFIA	8	Unmodified	_RKKKKFIA_					0	0	0		tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.2330810427666	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.925	1	62.925	62.425	63.425	0								0	0	0	1.0178	1	26235	26235		0	0	1				28411	16891	14078	14136	32575	32575					0.1729861546440361
RKKKKFIA	8	Unmodified	_RKKKKFIA_					0	0	0		tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.2332336306572	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.629	1	64.629	64.129	65.129	0								0	0	0	1.0178	1	26939	26939		0	0	1				28412	16891	14078	14136	32576	32576					0.1729861546440361
RKKKKFIA	8	Unmodified	_RKKKKFIA_					0	0	0		tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.2360107302666	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.84	1	63.17	62.67	63.67	0.32974								0	0	0	1.0178	1	26328	26328		0	0	1				28413	16891	14078	14136	32577	32577					0.1729861546440361
RKKKKFIA	8	Unmodified	_RKKKKFIA_					0	0	0		tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	tr|A0A7D6VSY5|A0A7D6VSY5_9CLOTPolysaccharidedeacetylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11070PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	340.2339965701103	3	340.234316	1017.68112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.216	1	63.634	63.134	64.134	1.4177								0	0	0	1.0178	1	26089	26089		0	0	1				28414	16891	14078	14136	32578	32578					0.1729861546440361
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9541503787041	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.3	1	103.3	102.8	103.8	0								0	0	0	0.66264	1	43333	43333		0	0	1		+		28415	8297	14079	14137	32579	32579					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9537231326103	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.43	1	103.43	102.93	103.93	0								0	0	0	0.66264	1	43409	43409		0	0	1		+		28416	8297	14079	14137	32580	32580					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9561645388603	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.53	1	103.53	103.03	104.03	0								0	0	0	0.66264	1	43478	43478		0	0	1		+		28417	8297	14079	14137	32581	32581					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9560424685478	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.64	1	103.64	103.14	104.14	0								0	0	0	0.66264	1	43556	43556		0	0	1		+		28418	8297	14079	14137	32582	32582					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9558593630791	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	103.87	103.37	104.37	0								0	0	0	0.66264	1	43712	43712		0	0	1		+		28419	8297	14079	14137	32583	32583					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9556762576103	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104	1	104	103.5	104.5	0								0	0	0	0.66264	1	43800	43800		0	0	1		+		28420	8297	14079	14137	32584	32584					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9478637576103	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.34	1	104.34	103.84	104.84	0								0	0	0	0.66264	1	44009	44009		0	0	1		+		28421	8297	14079	14137	32585	32585					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9555541872978	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.45	1	104.45	103.95	104.95	0								0	0	0	0.66264	1	44083	44083		0	0	1		+		28422	8297	14079	14137	32586	32586					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9559203982353	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.56	1	104.56	104.06	105.06	0								0	0	0	0.66264	1	44160	44160		0	0	1		+		28423	8297	14079	14137	32587	32587					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9553100466728	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.85	1	104.85	104.35	105.35	0								0	0	0	0.66264	1	44362	44362		0	0	1		+		28424	8297	14079	14137	32588	32588					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	628.9553710818291	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	104.96	104.46	105.46	0								0	0	0	0.66264	1	44439	44439		0	0	1		+		28425	8297	14079	14137	32589	32589					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	628.9561035037041	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.1	1	107.15	106.65	107.65	0.052452								0	0	0	0.66264	1	45746	45746		0	0	1		+		28426	8297	14079	14137	32590	32590					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9550048708916	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.84	1	106	105.5	106.5	0.16679								0	0	0	0.66264	1	45117	45117		0	0	1		+		28427	8297	14079	14137	32591	32591					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9556762576103	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.23	1	106.39	105.89	106.89	0.16174								0	0	0	0.66264	1	45390	45390		0	0	1		+		28428	8297	14079	14137	32592	32592					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9561035037041	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.34	1	106.5	106	107	0.16174								0	0	0	0.66264	1	45463	45463		0	0	1		+		28429	8297	14079	14137	32593	32593					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9553100466728	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.44	1	106.6	106.1	107.1	0.16174								0	0	0	0.66264	1	45525	45525		0	0	1		+		28430	8297	14079	14137	32594	32594					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9551879763603	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.55	1	106.71	106.21	107.21	0.16174								0	0	0	0.66264	1	45596	45596		0	0	1		+		28431	8297	14079	14137	32595	32595					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9557372927666	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.66	1	106.82	106.32	107.32	0.16174								0	0	0	0.66264	1	45673	45673		0	0	1		+		28432	8297	14079	14137	32596	32596					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9552490115166	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.77	1	106.93	106.43	107.43	0.16174								0	0	0	0.66264	1	45737	45737		0	0	1		+		28433	8297	14079	14137	32597	32597					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9549438357353	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.87	1	107.03	106.53	107.53	0.16174								0	0	0	0.66264	1	45799	45799		0	0	1		+		28434	8297	14079	14137	32598	32598					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9554321169853	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.98	1	107.15	106.65	107.65	0.16174								0	0	0	0.66264	1	45865	45865		0	0	1		+		28435	8297	14079	14137	32599	32599					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9554321169853	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.09	1	107.25	106.75	107.75	0.16174								0	0	0	0.66264	1	45932	45932		0	0	1		+		28436	8297	14079	14137	32600	32600					0.27513287155352373
RKKKKGKKKK	10	Unmodified	_RKKKKGKKKK_					0	0	0			REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	REV__chr2:171690263-171715328|88|18.36|0.19|6.57|+|1|DYNC1I2,DYNC1I2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.9553100466728	2	628.953698	1255.89284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.21	1	107.37	106.87	107.87	0.15795								0	0	0	0.66264	1	46009	46009		0	0	1		+		28437	8297	14079	14137	32601	32601					0.27513287155352373
RKKKKGTK	8	Unmodified	_RKKKKGTK_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;ENST00000471341.5_1_1:155785942-155827007:-|nuORF	ENSG00000116580|ENST00000368331|GON4L;REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3352844119072	2	487.335093	972.655633	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.876	1	23.053	22.553	23.553	1.177								0	0	0	1.0178	1	9139	9139		0	0	1				28438	1974;11693	14080	14138	32602	32602					0.16821140941999602
RKKKKGTK	8	Unmodified	_RKKKKGTK_					0	0	0		ENSG00000116580|ENST00000368331|GON4L;nc|ENSG00000116580|Q3T8J9-2|GON4L;nc|ENSG00000116580|Q3T8J9-3|GON4L;ENST00000471341.5_1_1:155785942-155827007:-|nuORF	ENSG00000116580|ENST00000368331|GON4L;REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3347961306572	2	487.335093	972.655633	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.177	1	23.354	22.854	23.854	1.177								0	0	0	1.0178	1	9269	9269		0	0	1				28439	1974;11693	14080	14138	32603	32603					0.16821140941999602
RKKKKKFK	8	Unmodified	_RKKKKKFK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2567932009697	3	364.257232	1089.74987	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.047	1	64.376	63.876	64.876	0.32899								0	0	0	1.0178	1	26834	26834		0	0	1				28440	5522	14081	14139	32604	32604					0.2085827976411565
RKKKKKKLR	9	Unmodified	_RKKKKKKLR_					0	0	0			REV__AluJb_dup107864|chr17:42999154-42999315:-|11.94298668272571|0.0002278324850216|15.68|429.0|4|2|sense	REV__AluJb_dup107864|chr17:42999154-42999315:-|11.94298668272571|0.0002278324850216|15.68|429.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9434081912041	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.53	1	107.69	107.19	108.19	0.15795								0	0	0	0.42693	1	46222	46222		0.52476	0	1		+		28441	8101	14082	14140	32605	32605					0.2691701798387385
RKKKKSVKK	9	Unmodified	_RKKKKSVKK_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2678100466728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.614	1	42.614	42.114	43.114	0								0	0	0	0.42693	1	17834	17834		0.26902	0.26902	1				28442	4457	14083	14141	32606	32606					0.22265647447261472
RKKKKSVKK	9	Unmodified	_RKKKKSVKK_					0	0	0		nc|ENSG00000177679|A6NNA2|SRRM3;ENSG00000177679|ENST00000611745|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	nc|ENSG00000177679|A6NNA2|SRRM3	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2673522830009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.163	1	42.483	41.983	42.983	0.32058								0	0	0	0.42693	1	17709	17709		0.26902	0.26902	1				28443	4457	14083	14141	32607	32607					0.22265647447261472
RKKKKTKLKI	10	Unmodified	_RKKKKTKLKI_					0	0	0		tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3096496462822	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.64	1	105.8	105.3	106.3	0.16679								0	0	0	0.66255	1	44979	44979		0.13989	0.13989	1				28444	17335	14084	14142	32608	32608					0.27310751578238524
RKKKKTKLKI	10	Unmodified	_RKKKKTKLKI_					0	0	0		tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3091308474541	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.73	1	105.9	105.4	106.4	0.16679								0	0	0	0.66255	1	45044	45044		0.13989	0.13989	1				28445	17335	14084	14142	32609	32609					0.27310751578238524
RKKKKTKLKI	10	Unmodified	_RKKKKTKLKI_					0	0	0		tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	tr|A0A7D7AEJ6|A0A7D7AEJ6_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02775PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3084899783134	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.85	1	106.02	105.52	106.52	0.16679								0	0	0	0.66255	1	45125	45125		0.13989	0.13989	1				28446	17335	14084	14142	32610	32610					0.27310751578238524
RKKKMRKLFK	10	Unmodified	_RKKKMRKLFK_					0	0	0		ENST00000559305.5_1_15:59191033-59209159:-|nuORF	ENST00000559305.5_1_15:59191033-59209159:-|nuORF	ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	341.4781371951103	4	341.477418	1361.88056	0.56529	0.00019304	0.37416	0.00012777	0.93945	0.0003208	341.4774933030518	28.288	1.3083	28.559	28.243	29.551	0.27119					128	42	4	0	0	0	0.89803	1	11921	11921		0.13989	0.04505	1	8660700			28447	7322	14085	14143	32611	32611					0.2140992742065464
RKKKMRKLFK	10	Unmodified	_RKKKMRKLFK_					0	0	0		ENST00000559305.5_1_15:59191033-59209159:-|nuORF	ENST00000559305.5_1_15:59191033-59209159:-|nuORF	ENST00000559305.5_1_15:59191033-59209159:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	342.2123901247978	4	341.477418	1361.88056	0.23051	7.8713E-05	0.73798	0.000252	0.96848	0.00033071	341.4778355996939	27.86	0.58707	29.635	29.14	29.727	1.7754					24	18	2	0	0	0	0.12561	1	11515	11515		0	0	1	733140			28448	7322	14085	14143	32612	32612					0.2140992742065464
RKKKPKVLKPE	11	Unmodified	_RKKKPKVLKPE_					0	0	0			REV__ENSG00000247746|ENST00000500968|USP51	REV__ENSG00000247746|ENST00000500968|USP51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.7295715212822	4	338.479049	1349.88709	-2.3872	-0.00080803	-0.040325	-1.3649E-05	-2.4276	-0.00082168	338.47871550832554	22.754	0.20271	22.754	22.607	22.809	0					11	6	2	0	0	0	1.0391	1	9472	9472		0.40827	0	1	3270300	+		28449	11943	14086	14144	32613	32613					0.22614143853002133
RKKKQRVKELF	11	Unmodified	_RKKKQRVKELF_					0	0	0			REV__ENSG00000101654|ENST00000383314|RNMT	REV__ENSG00000101654|ENST00000383314|RNMT	MSMS	GG20161007_CRH_Patient100_A02_02	2	730.4639160037041	2	730.464627	1458.9147	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.45	1	102.51	102.01	103.01	0.062805								0	0	0	0.63775	1	42914	42914		0	0	1		+		28450	9044	14087	14145	32614	32614					0.20360047113285873
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2069885134697	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.387	1	60.387	59.887	60.887	0								0	0	0	1.0178	1	25185	25185		0.40072	0	1		+		28451	9520	14088	14146	32615	32615					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2073547244072	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.71	1	93.71	93.21	94.21	0								0	0	0	1.0178	1	39164	39164		0.40072	0	1		+		28452	9520	14088	14146	32616	32616					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2072936892509	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.06	1	60.388	59.888	60.888	0.32809								0	0	0	1.0178	1	25170	25170		0.40072	0	1		+		28453	9520	14088	14146	32617	32617					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2072631716728	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.287	1	72.612	72.112	73.112	0.32494								0	0	0	1.0178	1	30244	30244		0.40072	0	1		+		28454	9520	14088	14146	32618	32618					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2071411013603	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.711	1	74.036	73.536	74.536	0.32494								0	0	0	1.0178	1	30837	30837		0.40072	0	1		+		28455	9520	14088	14146	32619	32619					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2080261111259	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.333	1	89.557	89.057	90.057	0.22359								0	0	0	1.0178	1	37444	37444		0.40072	0	1		+		28456	9520	14088	14146	32620	32620					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2077514529228	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.835	1	62.255	61.755	62.755	1.4196								0	0	0	1.0178	1	25514	25514		0.40072	0	1		+		28457	9520	14088	14146	32621	32621					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2074157595634	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.586	1	73.916	73.416	74.416	1.3297								0	0	0	1.0178	1	30466	30466		0.40072	0	1		+		28458	9520	14088	14146	32622	32622					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2077209353447	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.087	1	83.299	82.799	83.799	1.2125								0	0	0	1.0178	1	34461	34461		1.6526	0	1		+		28459	9520	14088	14146	32623	32623					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2061035037041	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.305	1	85.901	85.401	86.401	1.5962								0	0	0	1.0178	1	35359	35359		1.6526	0	1		+		28460	9520	14088	14146	32624	32624					0.11662039576856387
RKKLLDVS	8	Unmodified	_RKKLLDVS_					0	0	0			REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	REV__nc|ENSG00000118407|Q7Z7B0-3|FILIP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2072631716728	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.537	1	86.133	85.633	86.633	1.5962								0	0	0	1.0178	1	35456	35456		0.40072	0	1		+		28461	9520	14088	14146	32625	32625					0.11662039576856387
RKKNGKRPKQI	11	Unmodified	_RKKNGKRPKQI_					0	0	0		ENST00000544612.5_1_11:94230041-94230104:+|nuORF	ENST00000544612.5_1_11:94230041-94230104:+|nuORF	ENST00000544612.5_1_11:94230041-94230104:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.9704467654228	4	338.970385	1351.85244	0.77786	0.00026367	-1.9625	-0.00066524	-1.1847	-0.00040157	339.22001085112146	32.88	0.90034	33.174	32.621	33.521	0.29431					79	30	4	0	0	0	1.039	1	13753	13753		0.45452	0.046251	1	4237600			28462	7231	14089	14147	32626	32626					0.19058320764929704
RKKQRQRNV	9	Unmodified	_RKKQRQRNV_					0	0	0		ENST00000471979.6_1_4:20754367-20754490:+|nuORF	ENST00000471979.6_1_4:20754367-20754490:+|nuORF	ENST00000471979.6_1_4:20754367-20754490:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2489196658134	4	303.940357	1211.73232	1.0696	0.0003251	2.256	0.0006857	3.3257	0.0010108	304.1923983543889	45.693	0.17633	46.022	45.873	46.049	0.32899					6	5	2	0	0	0	0.11955	1	19164	19164		0	0	1	96306			28463	6746	14090	14148	32627	32627					0.13492332491182424
RKKRLIAPPT	10	Unmodified	_RKKRLIAPPT_					0	0	0			REV__nc|ENSG00000185697|P10243-2|MYBL1	REV__nc|ENSG00000185697|P10243-2|MYBL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3904907107353	2	590.387857	1178.76116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.73	1	104.91	104.41	105.41	0.1731								0	0	0	0.66166	1	44386	44386		1.6526	0	1		+		28464	11472	14091	14149	32628	32628					0.17893057067612972
RKKRRKRATK	10	Unmodified	_RKKRRKRATK_					0	0	0		ENST00000420660.5_1_2:219134176-219134257:-|nuORF	ENST00000420660.5_1_2:219134176-219134257:-|nuORF	ENST00000420660.5_1_2:219134176-219134257:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	333.0383178591728	4	332.72719	1326.87965	1.3847	0.00046074	0.74447	0.00024771	2.1292	0.00070844	332.72730942723405	72.439	0.34228	72.764	72.579	72.921	0.32494					15	10	2	0	0	0	0.12561	1	30285	30285		0	0	1	212470			28465	6444	14092	14150	32629	32629					0.22928849095978876
RKKRRKRDP	9	Unmodified	_RKKRRKRDP_					0	0	0		ENSG00000176256|ENST00000681531|HMGB4	ENSG00000176256|ENST00000681531|HMGB4	ENSG00000176256|ENST00000681531|HMGB4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1342956423759	4	310.702178	1238.7796	-0.072716	-2.2593E-05	0.42476	0.00013197	0.35205	0.00010938	310.9526753592104	24.812	0.36628	26.497	26.359	26.726	1.6845					15	11	2	0	0	0	0.11954	1	10385	10385		0	0	1	271880			28466	4402	14093	14151	32630	32630					0.16976611762174798
RKKRTKAK	8	Unmodified	_RKKRTKAK_					0	0	0		ENSG00000096063|ENST00000373825|SRPK1;nc|ENSG00000096063|Q96SB4-3|SRPK1;ENST00000507909.1_1_6:35888243-35888866:-|nuORF;ENST00000510290.5_1_6:35838717-35888866:-|nuORF;ENST00000423325.6_1_6:35858793-35888866:-|nuORF;ENST00000513367.1_1_6:35855779-35888866:-|nuORF;SRPK1-CPNE5|1|fusion	ENSG00000096063|ENST00000373825|SRPK1	ENSG00000096063|ENST00000373825|SRPK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3487121462822	2	508.345992	1014.67743	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.24	1	106.39	105.89	106.89	0.15781								0	0	0	1.0178	1	45452	45452		0.69038	0	1				28467	1192	14094	14152	32631	32631					0.17067945690564557
RKKVKRVLKYD	11	Unmodified	_RKKVKRVLKYD_					0	0	0		tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.2338134646416	4	358.983227	1431.9038	-0.51118	-0.00018351	3.7558	0.0013483	3.2446	0.0011648	359.2352701561721	61.963	0.28191	61.963	61.867	62.149	0					10	8	2	0	0	0	1.0402	1	25823	25823		0.094841	0.011491	1	567190			28468	16810	14095	14153	32632	32632					0.20512644738983
RKLHLIFFHV	10	Unmodified	_RKLHLIFFHV_					0	0	0			REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2026550173759	4	328.202751	1308.7819	0.99574	0.00032681	0.57492	0.00018869	1.5707	0.0005155	328.2027426683189	38.867	1.1585	39.175	38.857	40.015	0.30857					135	37	5	0	0	0	0.89588	1	16323	16323		1.9064	0	1	20874000	+		28469	12923	14096	14154	32633	32633					0.13985647447270821
RKLHLIFFHV	10	Unmodified	_RKLHLIFFHV_					0	0	0			REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.6035034060478	3	437.267909	1308.7819	2.1706	0.00094913	0.41233	0.0001803	2.5829	0.0011294	437.2679028949031	41.57	0.66568	41.887	41.371	42.037	0.31683					36	22	2	0	0	0	0.89422	2	17388	17388;17431		2.086	0.83491	1	696990	+		28470	12923	14096	14154	32634;32635	32634					0.13985647447270821
RKLHLIFFHV	10	Unmodified	_RKLHLIFFHV_					0	0	0			REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2025329470634	4	328.202751	1308.7819	-0.66977	-0.00021982	-0.34942	-0.00011468	-1.0192	-0.0003345	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	0.89588	1	15540	15540		1.9064	0	1	30589000	+		28471	12923	14096	14154	32636	32636					0.13985647447270821
RKLHLIFFHV	10	Unmodified	_RKLHLIFFHV_					0	0	0			REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	REV__ENST00000412669.1_1_7:90221116-90226630:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2018005251884	4	328.202751	1308.7819	0.18251	5.9899E-05	-1.8096	-0.00059391	-1.6271	-0.00053401	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	0.87762	1	15260	15260		3.8763	1.6236	1	36142000	+		28472	12923	14096	14154	32637	32637					0.13985647447270821
RKLILLFF	8	Unmodified	_RKLILLFF_					0	0	0			REV__ENSG00000167302|ENST00000637944|TEPSIN	REV__ENSG00000167302|ENST00000637944|TEPSIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3494140505791	2	525.347138	1048.67972	3.2093	0.001686	1.376	0.00072287	4.5853	0.0024089	525.347251015748	106.76	0.37379	106.92	106.66	107.03	0.15781					23	17	2	0	0	0	0.89198	1	45781	45781		0	0	1	7810100	+		28473	10861	14097	14155	32638	32638					0.15732981375663257
RKLIVFLML	9	Unmodified	_RKLIVFLML_					0	0	0		ENST00000461724.5_1_3:101546878-101547004:+|nuORF	ENST00000461724.5_1_3:101546878-101547004:+|nuORF	ENST00000461724.5_1_3:101546878-101547004:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2491027712822	3	378.247345	1131.72021	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.07	103.57	104.57	0.059502								0	0	0	0.42693	1	43779	43779		0.26902	0	1				28474	6675	14098	14156	32639	32639					0.15961579703775897
RKLKAILM	8	Unmodified	_RKLKAILM_					0	0	0			REV__tr|A0A7D6VM19|A0A7D6VM19_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12195PE=3SV=1	REV__tr|A0A7D6VM19|A0A7D6VM19_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.8273498415947	2	486.822973	971.631392	3.2262	0.0015706	3.5223	0.0017148	6.7486	0.0032854	486.8249775013867	107.64	0.24231	107.8	107.66	107.9	0.15795					51	12	5	0	0	0	0.89176	1	46244	46244		0.79363	0	1	4715600000	+		28475	15311	14099	14157	32640	32640					0.14444164464100595
RKLKAILM	8	Unmodified	_RKLKAILM_					0	0	0			REV__tr|A0A7D6VM19|A0A7D6VM19_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12195PE=3SV=1	REV__tr|A0A7D6VM19|A0A7D6VM19_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12195PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	486.822973	971.631392	3.2262	0.0015706	3.5223	0.0017148	6.7486	0.0032854	486.8249775013867	107.64	0.24231	107.8	107.66	107.9	0.15795	-0.0087446	-0.00032655	NaN	0.79363	51	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4715600000	+		28476	15311	14099	14157							0.14444164464100595
RKLKEIKPVV	10	Unmodified	_RKLKEIKPVV_					0	0	0		ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	ENSG00000214866|ENST00000399143|DCDC2C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.4072143435478	2	605.405715	1208.79688	2.6463	0.0016021	-0.3751	-0.00022709	2.2712	0.001375	605.405463938124	107.46	0.24629	107.51	107.37	107.62	0.052452					28	11	4	0	0	0	0.89803	1	46006	46006		0.45834	0.057624	1	198390000			28477	5249	14100	14158	32641	32641					0.2008309452460253
RKLKFIFLL	9	Unmodified	_RKLKFIFLL_					0	0	0			REV__ENST00000239882.6_2_13:41593380-41593413:-|nuORF	REV__ENST00000239882.6_2_13:41593380-41593413:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3954345583916	2	589.394619	1176.77469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.22	1	107.38	106.88	107.88	0.15781								0	0	0	0.42693	1	46064	46064		0.6015	0.6015	1		+		28478	12121	14101	14159	32642	32642					0.1933691484684914
RKLKFIFLL	9	Unmodified	_RKLKFIFLL_					0	0	0			REV__ENST00000239882.6_2_13:41593380-41593413:-|nuORF	REV__ENST00000239882.6_2_13:41593380-41593413:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3952514529228	2	589.394619	1176.77469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.2	1	107.36	106.86	107.86	0.15795								0	0	0	0.42693	1	46001	46001		0.6015	0	1		+		28479	12121	14101	14159	32643	32643					0.1933691484684914
RKLKLKRKVR	10	Unmodified	_RKLKLKRKVR_					0	0	0			REV__ENST00000502782.5_1_5:34845647-34845701:+|nuORF	REV__ENST00000502782.5_1_5:34845647-34845701:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.3179809451103	3	442.317374	1323.93029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105	1	105.16	104.66	105.66	0.15859								0	0	0	0.66264	1	44634	44634		0	0	1		+		28480	13510	14102	14160	32644	32644					0.28128378420933586
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9442626833916	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.165	1	11.165	10.665	11.665	0								0	0	0	0.66176	1	4611	4611		1.4819	1.0812	1				28481	6037	14103	14161	32645	32645					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456664919853	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.911	1	14.911	14.411	15.411	0								0	0	0	0.66176	1	6189	6189		1.4819	0.28856	1				28482	6037	14103	14161	32646	32646					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9462158083916	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.7	1	16.7	16.2	17.2	0								0	0	0	0.66176	1	6931	6931		1.4819	1.0812	1				28483	6037	14103	14161	32647	32647					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9453002810478	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.003	1	17.003	16.503	17.503	0								0	0	0	0.66176	1	7057	7057		1.4819	1.0812	1				28484	6037	14103	14161	32648	32648					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.909	1	22.909	22.409	23.409	0								0	0	0	0.66176	1	9543	9543		1.4819	1.0812	1				28485	6037	14103	14161	32649	32649					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9444457888603	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.968	1	23.968	23.468	24.468	0								0	0	0	0.66176	1	9995	9995		1.4819	1.0812	1				28486	6037	14103	14161	32650	32650					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9478637576103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.692	1	25.692	25.192	26.192	0								0	0	0	0.6624	1	10723	10723		0.40072	0	1				28487	6037	14103	14161	32651	32651					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.875	1	25.875	25.375	26.375	0								0	0	0	0.66176	1	10801	10801		1.4819	1.0812	1				28488	6037	14103	14161	32652	32652					0.23019215007184357
RKLKQKIPRR	10	Unmodified	_RKLKQKIPRR_					0	0	0		ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456054568291	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.278	1	26.278	25.778	26.778	0								0	0	0	0.66176	1	10972	10972		1.4819	1.0812	1				28489	6037	14103	14161	32653	32653					0.23019215007184357
RKLKTLKKA	9	Unmodified	_RKLKTLKKA_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1085.755786120892	1	1085.75172	1084.74445	1.3142	0.0014269	2.168	0.0023539	3.4822	0.0037808	1085.75371221836	105.9	0.71831	105.9	105.27	105.99	0					112	36	4	0	0	0	0.85403	5	44718	44718;44802;44869;44946;45022		0	0	1	48317000			28490	7753	14104	14162	32654;32655;32656;32657;32658	32654					0.20546556181670894
RKLKTLKKA	9	Unmodified	_RKLKTLKKA_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1085.755297839642	1	1085.75172	1084.74445	1.3139	0.0014266	1.759	0.0019098	3.0729	0.0033364	1085.7533458241703	106.52	0.5119	106.52	106.13	106.65	0					71	24	3	0	0	0	0.85403	4	45259	45259;45332;45397;45496		0	0	1	39513000			28491	7753	14104	14162	32659;32660;32661;32662	32659					0.20546556181670894
RKLKTLKKA	9	Unmodified	_RKLKTLKKA_					0	0	0		L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|122|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1085.754077136517	1	1085.75172	1084.74445	1.314	0.0014267	1.1432	0.0012413	2.4572	0.0026679	1085.752648697913	106.83	0.25487	106.83	106.65	106.9	0					32	12	3	0	0	0	0.85403	2	45584	45584;45661		0	0	1	42394000			28492	7753	14104	14162	32663;32664	32663					0.20546556181670894
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4290649294853	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.48	1	102.48	101.98	102.98	0								0	0	0	0.66264	1	42946	42946		0	0	1				28493	16187	14105	14163	32665	32665					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4298583865166	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.63	1	102.63	102.13	103.13	0								0	0	0	0.66264	1	43012	43012		0	0	1				28494	16187	14105	14163	32666	32666					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4311401247978	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.22	1	104.22	103.72	104.72	0								0	0	0	0.66264	1	43941	43941		0	0	1				28495	16187	14105	14163	32667	32667					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4322387576103	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.33	1	104.33	103.83	104.83	0								0	0	0	0.66264	1	44005	44005		0	0	1				28496	16187	14105	14163	32668	32668					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4304687380791	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.44	1	104.44	103.94	104.94	0								0	0	0	0.66264	1	44073	44073		0	0	1				28497	16187	14105	14163	32669	32669					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4316284060478	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.55	1	104.55	104.05	105.05	0								0	0	0	0.66264	1	44151	44151		0	0	1				28498	16187	14105	14163	32670	32670					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4301025271416	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.75	1	104.75	104.25	105.25	0								0	0	0	0.66264	1	44286	44286		0	0	1				28499	16187	14105	14163	32671	32671					0.25313739706848537
RKLLIITLLL	10	Unmodified	_RKLLIITLLL_					0	0	0		tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	tr|A0A553SIC3|A0A553SIC3_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_14590PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	598.4282104372978	2	598.428659	1194.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.94	1	105.94	105.44	106.44	0								0	0	0	0.66264	1	45090	45090		0	0	1				28500	16187	14105	14163	32672	32672					0.25313739706848537
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2544128298759	3	389.253376	1164.7383	1.0572	0.00041153	1.6635	0.00064751	2.7207	0.001059	389.25439086783496	28.843	0.67502	29.122	28.705	29.38	0.2793					85	21	6	0	0	0	0.85206	1	12045	12045		0.26902	0	1	155380000			28501	5246	14106	14164	32673	32673					0.16252037950107479
RKLLLFKTF	9	Unmodified	_RKLLLFKTF_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3785888552666	2	583.376426	1164.7383	0.9508	0.00055468	2.2771	0.0013284	3.2279	0.0018831	583.3776243171152	28.839	0.51639	29.119	28.894	29.41	0.2793					40	16	3	0	0	0	0.847	1	12074	12074		0.45834	0	1	6566700			28502	5246	14106	14164	32674	32674					0.16252037950107479
RKLLLKRKLLL	11	Unmodified	_RKLLLKRKLLL_					0	0	0		ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF;REV__ENST00000342992.10_3_2:179510673-179515519:-|nuORF	ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	697.5106689333916	2	697.508306	1393.00206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.23	1	105.4	104.9	105.9	0.16679								0	0	0	0.63775	1	44711	44711		0	0	1				28503	5944;12509	14107	14165	32675	32675					0.3212787305483289
RKLLSHQKRRL	11	Unmodified	_RKLLSHQKRRL_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7344238162041	4	359.48366	1433.90553	-0.41079	-0.00014767	-0.06628	-2.3826E-05	-0.47707	-0.0001715	359.4834435023772	30.453	1.3602	31.736	30.887	32.247	1.2825					81	43	3	0	0	0	1.0388	1	12790	12790		0.50596	0	1	1560700	+		28504	9433	14108	14166	32676	32676					0.2059369854760007
RKLPLCPLLL	10	Unmodified	_RKLPLCPLLL_					0	0	0		ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2543517947197	3	389.2545	1164.74167	-0.47894	-0.00018643	-0.1089	-4.2388E-05	-0.58784	-0.00022882	389.25453835100774	31.932	0.43805	31.932	31.756	32.194	0					64	13	6	0	0	0	0.89803	1	13482	13482		0.77653	0.77653	1	99495000			28505	5544	14109	14167	32677	32677					0.16588964732477507
RKLPLCPLLL	10	Unmodified	_RKLPLCPLLL_					0	0	0		ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2541381716728	3	389.2545	1164.74167	0.1525	5.9363E-05	-0.77652	-0.00030226	-0.62401	-0.0002429	389.25418326119444	30.514	1.2422	31.796	31.502	32.744	1.2825					121	39	5	0	0	0	0.89803	2	12704	12704;12741		0.77653	0.77653	1	46380000			28506	5544	14109	14167	32678;32679	32678					0.16588964732477507
RKLPLCPLLL	10	Unmodified	_RKLPLCPLLL_					0	0	0		ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3773071169853	2	583.378112	1164.74167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.527	1	31.326	30.826	31.826	1.7987								0	0	0	0.66218	1	12376	12376		0.45834	0	1				28507	5544	14109	14167	32680	32680					0.16588964732477507
RKLPLCPLLL	10	Unmodified	_RKLPLCPLLL_					0	0	0		ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	ENST00000229328.9_1_12:120119136-120119388:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	389.2545	1164.74167	-0.47894	-0.00018643	-0.1089	-4.2388E-05	-0.58784	-0.00022882	389.25453835100774	31.932	0.43805	31.932	31.756	32.194	0	0.068076	0.00061572	NaN	0.77653	64	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	99495000			28508	5544	14109	14167							0.16588964732477507
RKLVKKKH	8	Unmodified	_RKLVKKKH_					0	0	0			REV__ENSG00000126464|ENST00000418929|PRR12	REV__ENSG00000126464|ENST00000418929|PRR12	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2419311404228	3	346.241582	1035.70292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.951	1	22.174	21.674	22.674	0.223								0	0	0	1.0178	1	9133	9133		0.45834	0	1		+		28509	9697	14110	14168	32681	32681					0.1864942021297793
RKMMEYLAF	9	Unmodified	_RKMMEYLAF_					0	0	0			REV__tr|A0A553SLM5|A0A553SLM5_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20890PE=3SV=1	REV__tr|A0A553SLM5|A0A553SLM5_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20890PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	594.7985107302666	2	594.798837	1187.58312	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.038	1	58.007	57.507	58.507	1.9684								0	0	0	0.35665	1	23500	23500		13.042	1.4022	1		+		28510	14989	14111	14169	32682	32682					-0.0031669723812228767
RKMPIFLV	8	Unmodified	_RKMPIFLV_					0	0	0		ENST00000240364.6_1_17:47787881-47787977:-|nuORF	ENST00000240364.6_1_17:47787881-47787977:-|nuORF	ENST00000240364.6_1_17:47787881-47787977:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1003.616381824017	1	1003.61212	1002.60484	3.5635	0.0035764	1.1943	0.0011986	4.7578	0.004775	1003.6129691493759	106.95	0.15501	107.11	107.01	107.17	0.15781					20	6	4	0	0	0	0.89178	1	45878	45878		0.69038	0.088878	1	116230000			28511	5567	14112	14170	32683	32683					0.10364475572771426
RKMQRWRLHL	10	Unmodified	_RKMQRWRLHL_					0	0	0			REV__ENST00000229214.8_1_12:75893569-75893638:-|nuORF	REV__ENST00000229214.8_1_12:75893569-75893638:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	356.7110778689384	4	356.710845	1422.81428	-0.81592	-0.00029105	1.3156	0.0004693	0.49972	0.00017826	356.71125210906354	52.794	1.11	52.794	52.255	53.365	0					145	37	5	0	0	0	0.8974	1	21972	21972		1.7423	0.52744	1	19031000	+		28512	12097	14113	14171	32684	32684					0.11978111578628159
RKNHMLQL	8	Unmodified	_RKNHMLQL_					0	0	0		tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	tr|A0A7D6VXK7|A0A7D6VXK7_9CLOTDNArepairATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11665PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2991821169853	2	520.295111	1038.57567	2.3159	0.001205	3.9796	0.0020706	6.2955	0.0032755	520.2974881972397	84.891	0.36753	86.05	85.843	86.21	1.159					22	11	3	0	0	0	0.77833	1	35639	35639		23.148	1.4018	1	1712000			28513	16984	14114	14172	32685	32685					0.057923312764842194
RKNKKVIN	8	Unmodified	_RKNKKVIN_					0	0	0		tr|A0A7D6W207|A0A7D6W207_9CLOTVWAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04665PE=4SV=1	tr|A0A7D6W207|A0A7D6W207_9CLOTVWAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04665PE=4SV=1	tr|A0A7D6W207|A0A7D6W207_9CLOTVWAdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04665PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3267700076103	2	500.324725	998.634898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.12	1	106.28	105.78	106.78	0.15781								0	0	0	1.0178	1	45371	45371		0.69038	0	1				28514	17027	14115	14173	32686	32686					0.1355255056231499
RKPKAAVP	8	Unmodified	_RKPKAAVP_					0	0	0		ENSG00000101363|ENST00000373606|MANBAL;ENST00000397150.5_1_20:35929770-35944815:+|nuORF	ENSG00000101363|ENST00000373606|MANBAL	ENSG00000101363|ENST00000373606|MANBAL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.7805663943291	2	433.782162	865.549771	0.46439	0.00020144	-2.0985	-0.0009103	-1.6341	-0.00070886	433.78119478897327	35.225	0.98882	36.5	36.277	37.266	1.2746					130	82	2	0	0	0	0.89178	1	14917	14917		0.69038	0	1	25409000			28515	1341	14116	14174	32687	32687					0.11161805096503485
RKPKLALRVK	10	Unmodified	_RKPKLALRVK_					0	0	0			REV__ENST00000537638.6_1_12:57881209-57881347:+|nuORF	REV__ENST00000537638.6_1_12:57881209-57881347:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9230834841728	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.031	1	16.031	15.531	16.531	0								0	0	0	0.66166	1	6657	6657		1.6526	0	1		+		28516	13761	14117	14175	32688	32688					0.22849622855642338
RKPKPLWL	8	Unmodified	_RKPKPLWL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	346.5596496462822	3	346.5588	1036.65457	-1.2088	-0.0004189	2.907	0.0010075	1.6983	0.00058856	346.56005040923804	65.129	0.82642	65.129	64.753	65.579	0					62	25	3	0	0	0	0.89185	2	27172	27172;27229		0.45834	0	1	1654000			28517	679	14118	14176	32689;32690	32689					0.13770926573079123
RKPKPLWL	8	Unmodified	_RKPKPLWL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	346.5597106814384	3	346.5588	1036.65457	-1.3678	-0.00047402	2.5658	0.0008892	1.198	0.00041518	346.55950114149584	67.286	0.64389	67.286	66.893	67.537	0					47	20	3	0	0	0	0.89185	1	28077	28077		0.45834	0	1	4614500			28518	679	14118	14176	32691	32691					0.13770926573079123
RKPKPLWL	8	Unmodified	_RKPKPLWL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5590087771416	3	346.5588	1036.65457	1.2449	0.00043143	0.77284	0.00026783	2.0177	0.00069926	346.55908020635275	65.647	0.58287	67.046	66.757	67.34	1.3989					49	18	3	0	0	0	0.89185	1	27542	27542		0.45834	0	1	2533300			28519	679	14118	14176	32692	32692					0.13770926573079123
RKPKPLWL	8	Unmodified	_RKPKPLWL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	346.5588	1036.65457	-1.3678	-0.00047402	2.5658	0.0008892	1.198	0.00041518	346.55950114149584	67.286	0.64389	67.286	66.893	67.537	0	0.19455	0.0014696	NaN	0.45834	47	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4614500			28520	679	14118	14176							0.13770926573079123
RKPKPLWL	8	Unmodified	_RKPKPLWL_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	346.5588	1036.65457	1.3584	0.00047077	0.23981	8.311E-05	1.5982	0.00055388	346.55894388500326	65.128	0.59261	67.037	66.783	67.376	1.9085	-0.054784	-0.0009487	NaN	0.45834	46	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1963000			28521	679	14118	14176							0.13770926573079123
RKPRRRWYWAP	11	Unmodified	_RKPRRRWYWAP_					0	0	0			REV__ENSG00000172935|ENST00000309099|MRGPRF	REV__ENSG00000172935|ENST00000309099|MRGPRF	MSMS	GG20161007_CRH_Patient100_W632_02	4	786.4467040896416	2	786.44456	1570.87457	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.55	103.05	104.05	0.18066								0	0	0	0.63775	1	43514	43514		0.35063	0.35063	1		+		28522	11079	14119	14177	32693	32693					0.11196545233360666
RKQHSLLKRLR	11	Unmodified	_RKQHSLLKRLR_					0	0	0		ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7339965701103	4	359.48366	1433.90553	-0.24428	-8.7814E-05	-1.7993	-0.00064684	-2.0436	-0.00073465	359.48291863379364	28.8	2.1919	30.082	29.125	31.317	1.2825					177	71	5	0	0	0	1.0402	1	12477	12477		0.094841	0	1	23719000			28523	1908	14120	14178	32694	32694					0.2059369854760007
RKQHYIDYN	9	Unmodified	_RKQHYIDYN_					0	0	0		tr|A0A7D6VXW2|A0A7D6VXW2_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_14260PE=4SV=1	tr|A0A7D6VXW2|A0A7D6VXW2_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_14260PE=4SV=1	tr|A0A7D6VXW2|A0A7D6VXW2_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_14260PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.8757507205009	3	412.875516	1235.60472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.19303	1	0.92882	0.42882	1.4288	0.73579								0	0	0	0.42693	1	78	78		0.23584	0.076522	1				28524	16991	14121	14179	32695	32695					-0.0036585289351478423
RKQLLSLT	8	Unmodified	_RKQLLSLT_					0	0	0		ENSG00000183735|ENST00000331710|TBK1;ENST00000545392.1_1_12:64890804-64891535:+|nuORF	ENSG00000183735|ENST00000331710|TBK1	ENSG00000183735|ENST00000331710|TBK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2073852419853	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.74	1	103.9	103.4	104.4	0.16055								0	0	0	1.0178	1	43800	43800		1.4819	0	1				28525	4662	14122	14180	32696	32696					0.11662039576845018
RKQLTKGKPR	10	Unmodified	_RKQLTKGKPR_					0	0	0			REV__nc|ENSG00000187772|Q6ZN17-2|LIN28B	REV__nc|ENSG00000187772|Q6ZN17-2|LIN28B	MSMS	GG20161007_CRH_Patient100_A02_01	1	404.5948364138603	3	404.594684	1210.76222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.539	1	97.539	97.039	98.039	0								0	0	0	0.66151	1	40779	40779		1.9064	0	1		+		28526	11550	14123	14181	32697	32697					0.16527271436507363
RKQLTLPSLR	10	Unmodified	_RKQLTLPSLR_					0	0	0		ENST00000477081.1_1_17:59477759-59482423:+|nuORF;ENSG00000121068|ENST00000240328|TBX2	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.5894042849541	3	404.59094	1210.75099	-0.42201	-0.00017074	-2.6376	-0.0010672	-3.0596	-0.0012379	404.58968803163737	23.442	0.57819	23.442	23.26	23.839	0					32	18	2	0	0	0	0.88508	1	9829	9829		3.0723	1.48	1	837750			28527	2129	14124	14182	32698	32698					0.15404449342349835
RKQLTLPSLR	10	Unmodified	_RKQLTLPSLR_					0	0	0		ENST00000477081.1_1_17:59477759-59482423:+|nuORF;ENSG00000121068|ENST00000240328|TBX2	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	ENST00000477081.1_1_17:59477759-59482423:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5368224978447	4	303.695024	1210.75099	-2.9977	-0.00091038	-1.0319	-0.00031339	-4.0296	-0.0012238	303.6946648376646	24.199	0.95522	24.199	23.779	24.734	0					70	30	3	0	0	0	0.12551	1	10290	10290		3.3196	1.0369	1	2812100			28528	2129	14124	14182	32699	32699					0.15404449342349835
RKQRRIRTT	9	Unmodified	_RKQRRIRTT_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B	ENSG00000165462|ENST00000298231|PHOX2A	ENSG00000165462|ENST00000298231|PHOX2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	607.8841430544853	2	607.881262	1213.74797	1.5622	0.0009496	3.6557	0.0022222	5.2179	0.0031718	607.8831379827222	107.48	0.15829	107.48	107.39	107.55	0					20	7	4	0	0	0	0.83213	1	46090	46090		2.0598	0.21551	1	22620000			28529	1659	14125	14183	32700	32700					0.14964619008219415
RKQRRIRTT	9	Unmodified	_RKQRRIRTT_					0	0	0		ENSG00000165462|ENST00000298231|PHOX2A;ENSG00000109132|ENST00000226382|PHOX2B	ENSG00000165462|ENST00000298231|PHOX2A	ENSG00000165462|ENST00000298231|PHOX2A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	607.881262	1213.74797	2.6473	0.0016093	2.4695	0.0015012	5.1169	0.0031104	607.8825593774644	107.46	0.1843	107.51	107.39	107.58	0.052452	-0.021493	0.00036037	NaN	2.0598	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41999000			28530	1659	14125	14183							0.14964619008219415
RKQRTVLV	8	Unmodified	_RKQRTVLV_					0	0	0		nc|ENSG00000250067|A6XGL0-2|YJEFN3;ENST00000458210.7_1_19:19645671-19648330:+|nuORF;ENSG00000250067|ENST00000514277|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	nc|ENSG00000250067|A6XGL0-2|YJEFN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3269836306572	2	500.324725	998.634898	3.1915	0.0015968	1.79	0.00089556	4.9814	0.0024923	500.32567980500704	107.6	0.2944	107.76	107.6	107.9	0.15781					61	15	6	0	0	0	0.89176	1	46355	46355		0.79363	0	1	3082599999.9999995			28531	5379	14126	14184	32701	32701					0.1355255056231499
RKRAPPVRV	9	Unmodified	_RKRAPPVRV_					0	0	0		nc|ENSG00000146414|Q149N8-5|SHPRH;SHPRH|p.Y702Sfs*18|1|0.14|ENSG00000146414|chr6:145943276-145943276|T/-|frameshift_variant;nc|ENSG00000146414|Q149N8-2|SHPRH;nc|ENSG00000146414|Q149N8-4|SHPRH;ENSG00000146414|ENST00000275233|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	nc|ENSG00000146414|Q149N8-5|SHPRH	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2387267947197	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.584	1	92.752	92.252	93.252	0.16835								0	0	0	0.42693	1	38771	38771		0.23584	0	1				28532	3152	14127	14185	32702	32702					0.15259348064842015
RKRGIQIVPV	10	Unmodified	_RKRGIQIVPV_					0	0	0		L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|44|1|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|44|1|sense	L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|44|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2548400759697	3	389.25578	1164.74551	-0.57311	-0.00022308	-3.3039	-0.0012861	-3.877	-0.0015092	389.2547763831149	29.807	0.58382	29.807	29.608	30.192	0					82	18	6	0	0	0	0.89803	1	12481	12481		1.5923	0.89462	1	134340000			28533	7761	14128	14186	32703	32703					0.16972770550546556
RKRGKLPG	8	Unmodified	_RKRGKLPG_					0	0	0		nc|ENSG00000198931|P07741-2|APRT;ENSG00000198931|ENST00000378364|APRT	nc|ENSG00000198931|P07741-2|APRT	nc|ENSG00000198931|P07741-2|APRT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.3008605837822	2	456.29851	910.582468	3.4717	0.0015841	1.3757	0.00062772	4.8473	0.0022118	456.29931911919067	107.68	0.91288	107.84	107.08	107.99	0.15795					91	46	6	0	0	0	0.89198	1	46354	46354		0	0	1	9888700000			28534	5104	14129	14187	32704	32704					0.12360012219380678
RKRICILVFLR	11	Unmodified	_RKRICILVFLR_					0	0	0		nc|ENSG00000184999|Q63ZE4-2|SLC22A10;ENSG00000184999|ENST00000332793|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.3067809939384	3	472.970986	1415.89113	2.2008	0.0010409	0.49922	0.00023612	2.7	0.001277	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0402	2	16416	16416;16608		0.094841	0.011491	1	10069000			28535	4723	14130	14188	32705;32706	32705					0.1998191007510286
RKRICILVFLR	11	Unmodified	_RKRICILVFLR_					0	0	0		nc|ENSG00000184999|Q63ZE4-2|SLC22A10;ENSG00000184999|ENST00000332793|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	nc|ENSG00000184999|Q63ZE4-2|SLC22A10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9722167849541	3	472.970986	1415.89113	2.2546	0.0010664	0.57332	0.00027117	2.8279	0.0013375	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	1.0402	1	16938	16938		0.094841	0	1	4678700			28536	4723	14130	14188	32707	32707					0.1998191007510286
RKRIYRSK	8	Unmodified	_RKRIYRSK_					0	0	0			REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	REV__ENST00000604081.1_1_12:54388028-54388532:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8485595583916	2	553.848899	1105.68324	2.6647	0.0014759	-3.6432	-0.0020178	-0.97843	-0.0005419	553.8466512056859	95.795	0.24699	95.918	95.741	95.988	0.12331					14	8	2	0	0	0	0.89181	1	40092	40092		0.6015	0	1	2094700	+		28537	14130	14131	14189	32708	32708					0.13463044202217134
RKRKAPAV	8	Unmodified	_RKRKAPAV_					0	0	0		ENSG00000198889|ENST00000371126|DCAF12L1;ENSG00000198354|ENST00000360028|DCAF12L2	ENSG00000198889|ENST00000371126|DCAF12L1	ENSG00000198889|ENST00000371126|DCAF12L1	MSMS	GG20161007_CRH_Patient100_W632_01	3	309.2063171267509	3	309.206649	924.598118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.65	1	103.81	103.31	104.31	0.16055								0	0	0	1.0178	1	43736	43736		0.45834	0	1				28538	5048	14132	14190	32709	32709					0.13280298736412988
RKRKLLDEH	9	Unmodified	_RKRKLLDEH_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8571044802666	2	597.856921	1193.69929	2.191	0.0013099	-1.5547	-0.00092949	0.63627	0.0003804	597.8563512686859	73.485	0.61681	73.81	73.553	74.169	0.32494					33	19	3	0	0	0	0.85019	1	30884	30884		0.52476	0.066424	1	951690	+		28539	11593	14133	14191	32710	32710					0.11018705648461946
RKRKLRRMRKK	11	Unmodified	_RKRKLRRMRKK_					0	0	0			REV__ENSG00000229117|ENST00000546591|RPL41	REV__ENSG00000229117|ENST00000546591|RPL41	MSMS	GG20161007_CRH_Patient100_W632_02	4	778.5190917849541	2	778.517537	1555.02052	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.032	1	99.258	98.758	99.758	0.22545								0	0	0	0.63775	1	41671	41671		0	0	1		+		28540	11897	14134	14192	32711	32711					0.26521104477706103
RKRKREEEERR	11	Unmodified	_RKRKREEEERR_					0	0	0		SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	786.9547607302666	2	786.445486	1570.87642	2.8585	0.0022481	2.997	0.002357	5.8555	0.004605	786.9468615130229	97.855	0.19521	98.111	97.985	98.18	0.25636					14	7	3	0	0	0	1.0214	1	41172	41172		2.4985	0	1	15493000			28541	4305	14135	14193	32712	32712					0.11381509460625239
RKRKRPIQK	9	Unmodified	_RKRKRPIQK_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.4050781130791	2	605.404373	1208.79419	2.6465	0.0016022	-0.30945	-0.00018734	2.337	0.0014148	605.4036009573445	105.97	0.12274	106.03	105.96	106.08	0.05455					17	5	4	0	0	0	0.83213	1	45054	45054		2.0598	0.40713	1	101950000			28542	2242	14136	14194	32713	32713					0.198146839103174
RKRKRPIQK	9	Unmodified	_RKRKRPIQK_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.4053832888603	2	605.404373	1208.79419	3.1308	0.0018954	-0.68176	-0.00041274	2.449	0.0014826	605.4037076085995	105.95	0.17896	106.11	106.02	106.2	0.15859					27	8	5	0	0	0	0.83213	1	45228	45228		2.0598	0.40713	1	388550000			28543	2242	14136	14194	32714	32714					0.198146839103174
RKRKRPIQK	9	Unmodified	_RKRKRPIQK_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.4053222537041	2	605.404373	1208.79419	3.2635	0.0019758	-1.5645	-0.00094715	1.6991	0.0010286	605.4032281790688	105.94	0.1581	106.1	106.01	106.17	0.16679					26	7	5	0	0	0	0.83213	1	45160	45160		2.0598	1.4583	1	390760000			28544	2242	14136	14194	32715	32715					0.198146839103174
RKRKRPIQK	9	Unmodified	_RKRKRPIQK_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	605.404373	1208.79419	1.567	0.00094865	1.1182	0.00067697	2.6852	0.0016256	605.4044693562314	106.02	0.14156	106.02	105.93	106.07	0	-0.047762	0.0020801	NaN	2.0598	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66583000			28545	2242	14136	14194							0.198146839103174
RKRKRPIQK	9	Unmodified	_RKRKRPIQK_					0	0	0		ENSG00000124783|ENST00000244763|SSR1;nc|ENSG00000124783|P43307-2|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	605.404373	1208.79419	3.2635	0.0019758	-1.5645	-0.00094715	1.6991	0.0010286	605.4032281790688	105.94	0.1581	106.1	106.01	106.17	0.16679	0.04167	-0.0011681	NaN	2.0598	26	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	390760000			28546	2242	14136	14194							0.198146839103174
RKRKYFKKHEK	11	Unmodified	_RKRKYFKKHEK_					0	0	0		nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000141905|P08651-5|NFIC;nc|ENSG00000141905|P08651-3|NFIC;nc|ENSG00000141905|P08651-6|NFIC;nc|ENSG00000141905|P08651-2|NFIC;ENSG00000141905|ENST00000443272|NFIC;nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000141905|P08651-4|NFIC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.7374450564384	4	387.737489	1546.92085	1.1037	0.00042793	-2.765	-0.0010721	-1.6613	-0.00064415	387.7365653708847	84.245	1.3187	85.404	84.768	86.086	1.159					60	42	3	0	0	0	1.0402	1	35458	35458		0.094841	0.011491	1	1804600			28547	2976;7893	14137	14195	32716	32716					0.1692656534478374
RKRKYFKKHEK	11	Unmodified	_RKRKYFKKHEK_					0	0	0		nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000141905|P08651-5|NFIC;nc|ENSG00000141905|P08651-3|NFIC;nc|ENSG00000141905|P08651-6|NFIC;nc|ENSG00000141905|P08651-2|NFIC;ENSG00000141905|ENST00000443272|NFIC;nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000141905|P08651-4|NFIC;nc|ENSG00000147862|O00712-4|NFIB	nc|ENSG00000141905|P08651-4|NFIC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.7367736697197	4	387.737489	1546.92085	1.5918	0.00061721	-3.3504	-0.0012991	-1.7586	-0.00068187	387.73616843641344	83.814	1.2351	85.452	84.636	85.871	1.6379					62	39	2	0	0	0	1.0402	1	35238	35238		0.094841	0.011491	1	1449500			28548	2976;7893	14137	14195	32717	32717					0.1692656534478374
RKRKYLLIAIV	11	Unmodified	_RKRKYLLIAIV_					0	0	0			REV__nc|ENSG00000153707|P23468-4|PTPRD	REV__nc|ENSG00000153707|P23468-4|PTPRD	MSMS	GG20161007_CRH_Patient100_A02_01	1	458.3122436404228	3	458.309885	1371.90782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.71	1	104.71	104.21	105.21	0								0	0	0	0.63775	1	44258	44258		0.094841	0	1		+		28549	14463	14138	14196	32718	32718					0.2367473423271349
RKRPILLK	8	Unmodified	_RKRPILLK_					0	0	0			REV__ENST00000422953.1_1_9:5085001-5085526:-|nuORF	REV__ENST00000422953.1_1_9:5085001-5085526:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	512.3613769412041	2	512.361111	1022.70767	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.34	1	100.34	99.842	100.84	0								0	0	0	1.0178	1	42003	42003		0	0	1		+		28550	12982	14139	14197	32719	32719					0.1972230435575284
RKRPLLAP	8	Unmodified	_RKRPLLAP_					0	0	0		nc|ENSG00000143207|Q8NHY2-5|COP1;nc|ENSG00000143207|Q8NHY2-2|COP1;nc|ENSG00000143207|Q8NHY2-4|COP1;ENSG00000143207|ENST00000367669|COP1	nc|ENSG00000143207|Q8NHY2-5|COP1	nc|ENSG00000143207|Q8NHY2-5|COP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1977416872978	2	475.816536	949.618519	3.5252	0.0016773	1.068	0.00050815	4.5932	0.0021855	475.8165625997674	103.35	0.20865	103.4	103.29	103.5	0.059502					12	8	2	0	0	0	2.3239	1	43327	43327		0	0	1	3356100			28551	3019	14140	14198	32720	32720					0.1416946939623358
RKRRKLWQLES	11	Unmodified	_RKRRKLWQLES_					0	0	0			REV__nc|ENSG00000114948|O75077-3|ADAM23	REV__nc|ENSG00000114948|O75077-3|ADAM23	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	750.4518310427666	2	750.449508	1498.88446	2.7744	0.002082	0.031309	2.3496E-05	2.8057	0.0021055	750.4495450643624	87.049	0.82157	87.049	86.612	87.434	0					138	33	5	0	0	0	1.0405	6	36163	36163;36223;36291;36356;36419;36483		0	0	1	111640000	+		28552	9423	14141	14199	32721;32722;32723;32724;32725;32726	32721					0.1549768844809023
RKRRLTYSRQI	11	Unmodified	_RKRRLTYSRQI_					0	0	0			REV__ENSG00000133302|ENST00000265140|SLF1	REV__ENSG00000133302|ENST00000265140|SLF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.9701110720634	3	492.967181	1475.87971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.148	1	89.148	88.648	89.648	0								0	0	0	0.63775	1	37266	37266		1.2148	0.4383	1		+		28553	9874	14142	14200	32727	32727					0.1608080430528389
RKRRRMKKKK	10	Unmodified	_RKRRRMKKKK_					0	0	0		ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1414.336230456829	1	1414.93758	1413.93031	-0.29986	-0.00042429	0.12461	0.00017631	-0.17526	-0.00024798	1415.9395523644923	32.526	0.091877	34.35	34.303	34.395	1.8246					4	2	2	0	0	0	0.12561	1	13617	13617		0	0	1	836250			28554	5558	14143	14201	32728	32728					0.239900551493065
RKRRVKRI	8	Unmodified	_RKRRVKRI_					0	0	0			REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2610961794853	3	371.259747	1110.75741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.96	1	105.13	104.63	105.63	0.16679								0	0	0	1.0178	1	44542	44542		0	0	1		+		28555	15799	14144	14202	32729	32729					0.2064643208441339
RKRRVKRI	8	Unmodified	_RKRRVKRI_					0	0	0			REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2612792849541	3	371.259747	1110.75741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.14	1	106.3	105.8	106.8	0.16174								0	0	0	1.0178	1	45330	45330		0	0	1		+		28556	15799	14144	14202	32730	32730					0.2064643208441339
RKRRVKRI	8	Unmodified	_RKRRVKRI_					0	0	0			REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	REV__tr|A0A7D6ZZQ1|A0A7D6ZZQ1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07065PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2614929080009	3	371.259747	1110.75741	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.26	1	106.42	105.92	106.92	0.16174								0	0	0	1.0178	1	45410	45410		0	0	1		+		28557	15799	14144	14202	32731	32731					0.2064643208441339
RKRWRRNKQML	11	Unmodified	_RKRWRRNKQML_					0	0	0			REV__ENSG00000203697|ENST00000366872|CAPN8	REV__ENSG00000203697|ENST00000366872|CAPN8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.2668334841728	3	524.644044	1570.9103	1.6968	0.00089021	-2.4305	-0.0012752	-0.73375	-0.00038496	524.9767831332285	42.259	0.3112	44.181	44.041	44.353	1.9211					14	9	2	0	0	0	0.14606	1	17656	17656		0.50596	0.051438	1	1523100	+		28558	11760	14145	14203	32732	32732					0.14768259418701746
RKRYRRKLKKY	11	Unmodified	_RKRYRRKLKKY_					0	0	0		ENSG00000162817|ENST00000294889|C1orf115	ENSG00000162817|ENST00000294889|C1orf115	ENSG00000162817|ENST00000294889|C1orf115	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	399.2515441775322	4	399.508672	1594.00558	2.718	0.0010859	2.9737	0.001188	5.6917	0.0022739	399.5096943888766	61.959	0.15242	63.916	63.815	63.968	1.9571					7	4	2	0	0	0	0.14606	1	26008	26008		0	0	1	308940			28559	3650	14146	14204	32733	32733					0.23233935881398793
RKSGPAFP	8	Unmodified	_RKSGPAFP_					0	0	0		ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2448303103447	2	430.24287	858.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.55	1	105.6	105.1	106.1	0.05455								0	0	0	1.0178	1	44775	44775		0.79363	0	1				28560	5503	14147	14205	32734	32734					0.03628952791427764
RKSGPAFP	8	Unmodified	_RKSGPAFP_					0	0	0		ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	2	430.24287	858.471186	1.9912	0.0008567	1.796	0.00077273	3.7872	0.0016294	430.2440501986095	71.443	0.096924	71.767	71.687	71.784	0.32359					4	2	2	0	0	0	2.3239	1	29871	29871		0.79363	0	1	184840			28561	5503	14147	14205	32735	32735					0.03628952791427764
RKSGPAFP	8	Unmodified	_RKSGPAFP_					0	0	0		ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	ENST00000169298.7_1_3:186793708-186793933:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.2448303103447	2	430.24287	858.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.5	1	105.66	105.16	106.16	0.15859								0	0	0	1.0178	1	44953	44953		0.79363	0	1				28562	5503	14147	14205	32736	32736					0.03628952791427764
RKSKKKKRRHQ	11	Unmodified	_RKSKKKKRRHQ_					0	0	0		ENSG00000160818|ENST00000368232|GPATCH4;nc|ENSG00000160818|Q5T3I0-3|GPATCH4	ENSG00000160818|ENST00000368232|GPATCH4	ENSG00000160818|ENST00000368232|GPATCH4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1015807986259	4	370.741834	1478.93823	0.92395	0.00034255	-2.9516	-0.0010943	-2.0276	-0.00075172	370.74045807374307	29.416	0.36253	29.696	29.471	29.834	0.2793					16	11	2	0	0	0	0.14606	1	12369	12369		0.073264	0.073264	1	1552400			28563	3578	14148	14206	32737	32737					0.21791905670443157
RKSRLWLHR	9	Unmodified	_RKSRLWLHR_					0	0	0			REV__tr|A0A553SL91|A0A553SL91_NIACIAsparagine--tRNAligaseOS=NialliacirculansOX=1397GN=asnSPE=3SV=1	REV__tr|A0A553SL91|A0A553SL91_NIACIAsparagine--tRNAligaseOS=NialliacirculansOX=1397GN=asnSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6927368044853	4	313.694087	1250.74724	-2.7068	-0.00084912	-1.6566	-0.00051966	-4.3634	-0.0013688	313.69353164398336	30.668	0.64194	30.668	30.254	30.896	0					84	20	5	0	0	0	0.83148	1	12898	12898		2.086	0.49373	1	22347000	+		28564	14980	14149	14207	32738	32738					0.1318982435916496
RKSTRTHQ	8	Unmodified	_RKSTRTHQ_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|7|1|sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|7|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.2872802615166	2	507.283589	1012.55262	3.041	0.0015427	0.88712	0.00045002	3.9281	0.0019927	507.28463546070003	100.92	0.15792	100.98	100.87	101.03	0.067009					10	4	3	0	0	0	0.88163	1	42254	42254		7.9102	1.7044	1	4204200	+		28565	8218	14150	14208	32739	32739					0.046850284833681144
RKSTRTHQ	8	Unmodified	_RKSTRTHQ_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|7|1|sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|7|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	507.283589	1012.55262	3.041	0.0015427	0.88712	0.00045002	3.9281	0.0019927	507.28463546070003	100.92	0.15792	100.98	100.87	101.03	0.067009	0.015523	-0.00041884	NaN	7.9102	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4204200	+		28566	8218	14150	14208							0.046850284833681144
RKSVPIFVRD	10	Unmodified	_RKSVPIFVRD_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2448303103447	3	406.24354	1215.70879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.403	1	94.548	94.048	95.048	0.14493								0	0	0	0.66193	1	39512	39512		0.50596	0	1		+		28567	12020	14151	14209	32740	32740					0.10956473933993038
RKTAKKKYI	9	Unmodified	_RKTAKKKYI_					0	0	0		ENSG00000178913|ENST00000313368|TAF7	ENSG00000178913|ENST00000313368|TAF7	ENSG00000178913|ENST00000313368|TAF7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	378.5793640017509	3	379.248514	1134.72371	1.0951	0.00041531	-2.4796	-0.00094039	-1.3845	-0.00052508	379.24755015626647	31.209	0.42988	31.499	31.386	31.816	0.29086					32	13	3	0	0	0	0.11909	1	13219	13219		2.4985	0.75621	1	3379700			28568	4493	14152	14210	32741	32741					0.1617396580197692
RKTAKKYLIIS	11	Unmodified	_RKTAKKYLIIS_					0	0	0		ENST00000397861.6_1_17:54910299-54910416:-|nuORF	ENST00000397861.6_1_17:54910299-54910416:-|nuORF	ENST00000397861.6_1_17:54910299-54910416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.9663879275322	4	330.964503	1319.82891	1.7039	0.00056394	2.235	0.00073971	3.9389	0.0013036	331.21531020841485	62.954	0.49567	64.368	64.131	64.626	1.4134					29	15	3	0	0	0	1.0365	1	26414	26414		1.2148	0.65166	1	1396400			28569	6316	14153	14211	32742	32742					0.18178462207765733
RKTKTLMKK	9	Unmodified	_RKTKTLMKK_					0	0	0		ENSG00000181449|ENST00000325404|SOX2	ENSG00000181449|ENST00000325404|SOX2	ENSG00000181449|ENST00000325404|SOX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3634521365166	2	567.362993	1132.71143	1.0589	0.0006008	2.8209	0.0016005	3.8798	0.0022013	567.3644235172594	30.842	0.61762	31.128	30.764	31.381	0.2859					49	20	3	0	0	0	0.82114	1	12886	12886		4.3292	2.2695	1	3852500			28570	4577	14154	14212	32743	32743					0.1503860606728722
RKVDWLLP	8	Unmodified	_RKVDWLLP_					0	0	0		nc|ENSG00000279245|Q8IWN6|FAM223A;nc|ENSG00000272681|A6NKX1|FAM223B	nc|ENSG00000279245|Q8IWN6|FAM223A	nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8746520876884	3	342.874677	1025.6022	1.0272	0.0003522	0.26034	8.9263E-05	1.2875	0.00044146	342.8746265208564	36.497	0.72542	36.799	36.569	37.295	0.30197					125	48	4	0	0	0	0.88896	1	15277	15277		3.2813	3.2813	1	15443000			28571	8015	14155	14213	32744	32744					0.09042343439477918
RKVDWLLP	8	Unmodified	_RKVDWLLP_					0	0	0		nc|ENSG00000279245|Q8IWN6|FAM223A;nc|ENSG00000272681|A6NKX1|FAM223B	nc|ENSG00000279245|Q8IWN6|FAM223A	nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8752319216728	3	342.874677	1025.6022	-0.068838	-2.3603E-05	1.917	0.0006573	1.8482	0.0006337	342.87526041618617	38.004	1.0264	39.288	38.704	39.731	1.284					93	39	4	0	0	0	0.88577	1	15888	15888		5.2969	2.7984	1	31208000			28572	8015	14155	14213	32745	32745					0.09042343439477918
RKVGRPGRKR	10	Unmodified	_RKVGRPGRKR_					0	0	0		nc|ENSG00000119772|Q9Y6K1-3|DNMT3A;ENSG00000119772|ENST00000321117|DNMT3A	nc|ENSG00000119772|Q9Y6K1-3|DNMT3A	nc|ENSG00000119772|Q9Y6K1-3|DNMT3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1987792849541	4	303.199536	1208.76904	-0.38583	-0.00011698	-0.79887	-0.00024222	-1.1847	-0.0003592	303.19926330285165	29.807	1.345	31.089	30.312	31.657	1.2825					134	43	4	0	0	0	0.89803	1	12419	12419		0.62683	0	1	11216000			28573	2082	14156	14214	32746	32746					0.1730062910773995
RKVGVKRPRRV	11	Unmodified	_RKVGVKRPRRV_					0	0	0		nc|ENSG00000149231|Q8N4S0-2|CCDC82;ENST00000530106.1_1_11:96116391-96117917:-|nuORF;ENSG00000149231|ENST00000646818|CCDC82	nc|ENSG00000149231|Q8N4S0-2|CCDC82	nc|ENSG00000149231|Q8N4S0-2|CCDC82	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0458557009697	4	338.478378	1349.8844	-2.1016	-0.00071134	0.42006	0.00014218	-1.6815	-0.00056916	338.4783423998433	29.027	0.46165	29.027	28.81	29.272	0					31	14	3	0	0	0	0.14606	1	12215	12215		0.50596	0.36606	1	983530			28574	3233	14157	14215	32747	32747					0.22345733238717003
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1533080935478	3	384.581493	1150.72265	-0.5079	-0.00019533	1.55	0.00059609	1.0421	0.00040077	384.58199114097215	34.8	0.79745	34.8	34.28	35.077	0					46	27	2	0	0	0	0.11941	1	14388	14388		0.23584	0.23584	1	1232000			28575	6071	14158	14216	32748	32748					0.15331751433109275
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1531249880791	3	384.581493	1150.72265	-0.82567	-0.00031754	2.7018	0.0010391	1.8762	0.00072154	384.5824465220413	27.143	0.60874	27.143	26.953	27.562	0					52	19	4	0	0	0	0.11954	1	11394	11394		0.26902	0.033176	1	13570000			28576	6071	14158	14216	32749	32749					0.15331751433109275
RKVILFTFK	9	Unmodified	_RKVILFTFK_					0	0	0		ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	ENST00000367651.3_1_6:139693526-139693751:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1533691287041	3	384.581493	1150.72265	0.63957	0.00024597	1.2172	0.00046812	1.8568	0.00071408	384.58167592989383	24.925	0.72445	26.184	26.046	26.771	1.2594					67	23	4	0	0	0	0.11954	1	10654	10654		0.26902	0	1	11195000			28577	6071	14158	14216	32750	32750					0.15331751433109275
RKVILVSS	8	Unmodified	_RKVILVSS_					0	0	0		SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant;ENSG00000184985|ENST00000507866|SORCS2	SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2006103396416	3	301.19916	900.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.13	103.63	104.63	0.059502								0	0	0	1.0178	1	43817	43817		0.40072	0	1				28578	4722	14159	14217	32751	32751					0.12138654548152772
RKVILVSS	8	Unmodified	_RKVILVSS_					0	0	0		SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant;ENSG00000184985|ENST00000507866|SORCS2	SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.2007324099541	3	301.19916	900.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.02	1	104.18	103.68	104.68	0.16055								0	0	0	1.0178	1	43993	43993		0.40072	0	1				28579	4722	14159	14217	32752	32752					0.12138654548152772
RKVKAKSV	8	Unmodified	_RKVKAKSV_					0	0	0		ENST00000444720.1_1_13:21321226-21321529:-|nuORF	ENST00000444720.1_1_13:21321226-21321529:-|nuORF	ENST00000444720.1_1_13:21321226-21321529:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	458.3129150271416	2	458.308544	914.602535	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.65	1	104.81	104.31	105.31	0.16055								0	0	0	1.0178	1	44390	44390		0.69038	0	1				28580	6576	14160	14218	32753	32753					0.1418176315931987
RKVKLPIIG	9	Unmodified	_RKVKLPIIG_					0	0	0		ENST00000574137.1_1_16:10846489-10855721:+|nuORF;ENST00000571790.5_1_16:10837720-10857402:+|nuORF;nc|ENSG00000103274|P53384-2|NUBP1;ENSG00000103274|ENST00000283027|NUBP1	ENST00000574137.1_1_16:10846489-10855721:+|nuORF	ENST00000574137.1_1_16:10846489-10855721:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.3567382693291	2	512.355494	1022.69644	2.9039	0.0014878	0.94441	0.00048388	3.8483	0.0019717	512.3559587635004	104.35	0.20145	104.4	104.33	104.53	0.056801					17	11	2	0	0	0	0.84963	1	43975	43975		0.6015	0	1	9067000			28581	1425	14161	14219	32754	32754					0.1859948226161805
RKVKPRRKHK	10	Unmodified	_RKVKPRRKHK_					0	0	0			REV__ENSG00000114857|ENST00000232978|NKTR	REV__ENSG00000114857|ENST00000232978|NKTR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	334.0340148806572	4	333.975736	1331.87384	-2.0919	-0.00069866	2.0271	0.00067701	-0.064822	-2.1649E-05	333.97588474557205	33.225	1.1006	33.225	33.031	34.131	0					59	36	3	0	0	0	0.12561	1	13841	13841		0.13989	0	1	1816600	+		28582	9420	14162	14220	32755	32755					0.22117750584288842
RKVLPRNIAV	10	Unmodified	_RKVLPRNIAV_					0	0	0		ENST00000521636.1_1_8:39775423-39780236:+|nuORF;ENSG00000131203|ENST00000518237|IDO1	ENST00000521636.1_1_8:39775423-39780236:+|nuORF	ENST00000521636.1_1_8:39775423-39780236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2543823122978	3	389.25578	1164.74551	-0.58871	-0.00022916	-2.9093	-0.0011324	-3.498	-0.0013616	389.2553132111387	29.438	0.46121	29.438	29.178	29.64	0					65	14	6	0	0	0	0.89803	1	12278	12278		1.5923	0.39894	1	196810000			28583	2483	14163	14221	32756	32756					0.16972770550569294
RKVNRLPN	8	Unmodified	_RKVNRLPN_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.8731872439384	3	332.873559	995.598846	1.1131	0.00037051	-3.4008	-0.001132	-2.2877	-0.00076151	332.8726440450336	40.4	0.6273	40.713	40.381	41.008	0.31263					82	19	5	0	0	0	0.88896	1	17024	17024		3.2813	1.7994	1	226760000			28584	1919	14164	14222	32757	32757					0.1008709338547078
RKVRGPRKRG	10	Unmodified	_RKVRGPRKRG_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1988098025322	4	303.199536	1208.76904	-2.6152	-0.00079291	1.1154	0.00033818	-1.4998	-0.00045474	303.19974912720943	33.008	0.91563	33.008	32.318	33.233	0					92	30	4	0	0	0	0.8974	1	13837	13837		1.7423	0	1	5247200	+		28585	13950	14165	14223	32758	32758					0.1730062910773995
RKVRGPRKRG	10	Unmodified	_RKVRGPRKRG_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1985961794853	4	303.199536	1208.76904	-0.63122	-0.00019139	-1.6986	-0.00051502	-2.3298	-0.0007064	303.1990029690568	32.109	0.36208	33.39	33.172	33.534	1.2813					23	12	2	0	0	0	0.8974	1	13432	13432		1.7423	0	1	11202000	+		28586	13950	14165	14223	32759	32759					0.1730062910773995
RKVRGPRKRG	10	Unmodified	_RKVRGPRKRG_					0	0	0			REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	REV__ENST00000568710.1_1_16:67585-84971:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	303.1985961794853	4	303.199536	1208.76904	-0.66003	-0.00020012	-2.0993	-0.00063651	-2.7594	-0.00083664	303.19880336818323	32.401	0.78024	33.679	33.168	33.949	1.2782					60	26	4	0	0	0	0.12557	1	13432	13432		1.7423	0	1	7402200	+		28587	13950	14165	14223	32760	32760					0.1730062910773995
RKVRKVRFK	9	Unmodified	_RKVRKVRFK_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	608.9111816287041	2	608.909291	1215.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.196	1	16.093	15.593	16.593	0.89664								0	0	0	0.42693	1	6304	6304		0.52476	0.066424	1		+		28588	14320	14166	14224	32761	32761					0.20475871915687094
RKVRLILLL	9	Unmodified	_RKVRLILLL_					0	0	0		tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	375.2714721560478	3	375.272771	1122.79648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.18	1	105.18	104.68	105.68	0								0	0	0	0.42693	1	44582	44582		0.23584	0	1				28589	16682	14167	14225	32762	32762					0.23999719595417446
RKVRLILLL	9	Unmodified	_RKVRLILLL_					0	0	0		tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	tr|A0A553SU79|A0A553SU79_NIACISpoIID/LytBdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06510PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	375.2726013064384	3	375.272771	1122.79648	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.28	104.78	105.78	0.15859								0	0	0	0.42693	1	44702	44702		0.23584	0	1				28590	16682	14167	14225	32763	32763					0.23999719595417446
RKVRLRRWRH	10	Unmodified	_RKVRLRRWRH_					0	0	0		ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	ENST00000342232.4_1_8:75233190-75233559:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	366.0761596560478	4	366.482723	1461.90179	-0.32359	-0.00011859	0.33939	0.00012438	0.015807	5.7931E-06	366.48247881312255	30.917	0.84622	32.199	31.687	32.534	1.2825					59	26	3	0	0	0	0.12561	1	12765	12765		0	0	1	940050			28591	5939	14168	14226	32764	32764					0.1893107356438577
RKVRMRKFR	9	Unmodified	_RKVRMRKFR_					0	0	0		tr|A0A7D6ZW82|A0A7D6ZW82_9CLOTABC-FfamilyATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17975PE=4SV=1	tr|A0A7D6ZW82|A0A7D6ZW82_9CLOTABC-FfamilyATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17975PE=4SV=1	tr|A0A7D6ZW82|A0A7D6ZW82_9CLOTABC-FfamilyATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17975PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0710021853447	4	319.952838	1275.78225	-2.6181	-0.00083766	0.40311	0.00012898	-2.215	-0.00070868	319.9518745609199	31.063	0.089058	31.063	30.99	31.079	0					4	2	2	0	0	0	0.11957	1	13005	13005		0	0	1	153550			28592	17166	14169	14227	32765	32765					0.15538743895467633
RKVSDVKVP	9	Unmodified	_RKVSDVKVP_					0	0	0		nc|ENSG00000134317|Q9NZI5-2|GRHL1;ENSG00000134317|ENST00000324907|GRHL1	nc|ENSG00000134317|Q9NZI5-2|GRHL1	nc|ENSG00000134317|Q9NZI5-2|GRHL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2119018435478	3	343.213469	1026.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.06	1	101.06	100.56	101.56	0								0	0	0	0.42693	1	42308	42308		1.0715	0.67075	1				28593	2608	14170	14228	32766	32766					0.10633424605566688
RKWHYRQFRRS	11	Unmodified	_RKWHYRQFRRS_					0	0	0			REV__ENST00000548895.1_1_12:69678801-69679005:+|nuORF	REV__ENST00000548895.1_1_12:69678801-69679005:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	810.4459716677666	2	810.442549	1618.87055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.651	1	97.907	97.407	98.407	0.25636								0	0	0	0.63775	1	41082	41082		1.1933	0.84271	1		+		28594	13815	14171	14229	32767	32767					0.08586455739600751
RKWKRKNYLAL	11	Unmodified	_RKWKRKNYLAL_					0	0	0		nc|ENSG00000106443|O94880-2|PHF14;ENST00000490957.5_1_7:11013950-11101713:+|nuORF;nc|ENSG00000106443|O94880-1|PHF14;ENSG00000106443|ENST00000634607|PHF14	nc|ENSG00000106443|O94880-2|PHF14	nc|ENSG00000106443|O94880-2|PHF14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	493.4020263552666	3	492.636772	1474.88849	2.2083	0.0010879	-1.8728	-0.00092262	0.3355	0.00016528	492.63546502209647	84.922	0.12258	86.081	85.995	86.118	1.159					5	3	2	0	0	0	0.14606	1	35645	35645		0.094841	0.094841	1	499280			28595	1568	14172	14230	32768	32768					0.17003777941795306
RLAAMKPLRR	10	Unmodified	_RLAAMKPLRR_					0	0	0		nc|ENSG00000188994|O60281-2|ZNF292;ENSG00000188994|ENST00000369577|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6936828494072	4	303.693393	1210.74446	0.13611	4.1334E-05	0.47985	0.00014573	0.61595	0.00018706	303.6932458076568	24.627	0.77745	25.868	25.641	26.418	1.241					63	25	4	0	0	0	0.88031	1	10321	10321		3.5871	0	1	4726000			28596	4889	14173	14231	32769	32769					0.14752232909995655
RLADPVFIGF	10	Unmodified	_RLADPVFIGF_					0	0	0		ENST00000474787.1_1_9:139973059-139973974:+|nuORF;nc|ENSG00000197355|Q3KQV9-2|UAP1L1;ENSG00000197355|ENST00000409858|UAP1L1	ENST00000474787.1_1_9:139973059-139973974:+|nuORF	ENST00000474787.1_1_9:139973059-139973974:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8212158083916	2	567.818941	1133.62333	2.1838	0.00124	2.0741	0.0011777	4.2578	0.0024177	567.8197923958314	68.134	0.34188	69.512	69.303	69.645	1.3778					25	10	3	0	0	0	0.39773	2	28571	28571;28619		33.445	15.299	1	3649400			28597	4999	14174	14232	32770;32771	32770					0.06186308748328884
RLADPVFIGF	10	Unmodified	_RLADPVFIGF_					0	0	0		ENST00000474787.1_1_9:139973059-139973974:+|nuORF;nc|ENSG00000197355|Q3KQV9-2|UAP1L1;ENSG00000197355|ENST00000409858|UAP1L1	ENST00000474787.1_1_9:139973059-139973974:+|nuORF	ENST00000474787.1_1_9:139973059-139973974:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8210937380791	2	567.818941	1133.62333	1.6496	0.00093667	1.8561	0.0010539	3.5057	0.0019906	567.8195435556664	67.602	0.37264	69.472	69.238	69.611	1.87					32	11	4	0	0	0	0.50772	2	28322	28322;28371		27.223	9.0769	1	2884900			28598	4999	14174	14232	32772;32773	32772					0.06186308748328884
RLAFVAHVI	9	Unmodified	_RLAFVAHVI_					0	0	0			REV__nc|ENSG00000183625|P51677-2|CCR3	REV__nc|ENSG00000183625|P51677-2|CCR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.5471374392509	3	342.546671	1024.61818	-0.57422	-0.0001967	2.7578	0.00094467	2.1836	0.00074797	342.5473478627651	31.536	0.76387	32.818	32.438	33.202	1.2813					58	24	3	0	0	0	0.76456	1	13195	13195		5.2969	2.0156	1	2695500	+		28599	11400	14175	14233	32774	32774					0.10686049676360199
RLALPFLVIHI	11	Unmodified	_RLALPFLVIHI_					0	0	0			REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	324.2021057009697	4	323.71168	1290.81761	1.1172	0.00036165	0.96662	0.00031291	2.0838	0.00067456	323.71187036895014	44.529	2.3128	44.856	44.34	46.652	0.32674					123	77	3	0	0	0	0.14606	1	18514	18514		0.50596	0.50596	1	19040000	+		28600	12105	14176	14234	32775	32775					0.1838368490425637
RLALPFLVIHI	11	Unmodified	_RLALPFLVIHI_					0	0	0			REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	323.71168	1290.81761	0.65918	0.00021338	0.27676	8.9589E-05	0.93594	0.00030297	323.71175546969926	43.487	1.5117	44.841	44.408	45.919	1.3536	0.08338	-0.00027829	NaN	0.50596	87	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24732000	+		28601	12105	14176	14234							0.1838368490425637
RLALPFLVIHI	11	Unmodified	_RLALPFLVIHI_					0	0	0			REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	REV__ENST00000233154.8_1_2:106510254-106510317:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	323.71168	1290.81761	1.2262	0.00039692	0.15665	5.0709E-05	1.3828	0.00044763	323.71161977338016	42.655	0.9994	44.576	44.29	45.289	1.9211	-0.1817	-0.00043381	NaN	0.50596	75	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20035000	+		28602	12105	14176	14234							0.1838368490425637
RLARAAPA	8	Unmodified	_RLARAAPA_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000397676.7_1_3:183963587-183966660:-|nuORF;ENST00000414845.5_1_3:183961725-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2568847537041	2	413.256311	824.49807	0.84988	0.00035122	0.23866	9.8627E-05	1.0885	0.00044984	413.2561875143052	81.454	0.44801	81.454	81.195	81.643	0					30	14	3	0	0	0	0.89051	1	33864	33864		2.3027	0	1	5082900			28603	6671	14177	14235	32776	32776					0.07880061402602223
RLARAAPA	8	Unmodified	_RLARAAPA_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000397676.7_1_3:183963587-183966660:-|nuORF;ENST00000414845.5_1_3:183961725-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2576476931572	2	413.256311	824.49807	2.3947	0.00098963	0.4586	0.00018952	2.8533	0.0011791	413.2563488745223	80.247	0.40501	81.498	81.324	81.729	1.2512					22	12	2	0	0	0	0.89051	1	33697	33697		2.3027	0	1	2092800			28604	6671	14177	14235	32777	32777					0.07880061402602223
RLARAAPA	8	Unmodified	_RLARAAPA_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000397676.7_1_3:183963587-183966660:-|nuORF;ENST00000414845.5_1_3:183961725-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	ENST00000461415.5_1_3:183962900-183966669:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2573119997978	2	413.256311	824.49807	1.1978	0.00049498	0.90632	0.00037454	2.1041	0.00086952	413.25651828070033	79.93	0.43587	81.646	81.444	81.879	1.7167					24	13	2	0	0	0	0.89051	1	33519	33519		2.3027	0	1	2439500			28605	6671	14177	14235	32778	32778					0.07880061402602223
RLARASRRRR	10	Unmodified	_RLARASRRRR_					0	0	0			REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2785827517509	3	433.27646	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.514	1	87.514	87.014	88.014	0								0	0	0	0.6624	1	36574	36574		0.13989	0.04505	1		+		28606	13174	14178	14236	32779	32779					0.17101934742254343
RLARASRRRR	10	Unmodified	_RLARASRRRR_					0	0	0			REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2790099978447	3	433.27646	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.313	1	87.557	87.057	88.057	0.24387								0	0	0	0.6624	1	36609	36609		0.13989	0.04505	1		+		28607	13174	14178	14236	32780	32780					0.17101934742254343
RLARASRRRR	10	Unmodified	_RLARASRRRR_					0	0	0			REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2777282595634	3	433.27646	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.824	1	86.951	86.451	87.451	1.1265								0	0	0	0.6624	1	36088	36088		0.13989	0	1		+		28608	13174	14178	14236	32781	32781					0.17101934742254343
RLARASRRRR	10	Unmodified	_RLARASRRRR_					0	0	0			REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	REV__ENST00000457861.1_1_7:935511-935808:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2772399783134	3	433.27646	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.046	1	87.173	86.673	87.673	1.1265								0	0	0	0.6624	1	36208	36208		0.13989	0.04505	1		+		28609	13174	14178	14236	32782	32782					0.17101934742254343
RLARPVPV	8	Unmodified	_RLARPVPV_					0	0	0			REV__ENST00000544715.1_1_12:11869674-11905524:+|nuORF	REV__ENST00000544715.1_1_12:11869674-11905524:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1995422244072	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.079	1	34.376	33.876	34.876	0.29701								0	0	0	1.0178	1	14311	14311		1.6526	1.1943	1		+		28610	10090	14179	14237	32783	32783					0.11929493987850037
RLASRVQARPR	11	Unmodified	_RLASRVQARPR_					0	0	0			REV__nc|ENSG00000007516|O94812-7|BAIAP3	REV__nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2024719119072	4	328.203547	1308.78508	-2.1213	-0.00069621	-0.83313	-0.00027343	-2.9544	-0.00096965	328.2030365179827	37.778	0.70225	37.778	37.47	38.172	0					70	24	4	0	0	0	1.0224	1	15822	15822		2.4348	0	1	9907200	+		28611	8517	14180	14238	32784	32784					0.14304290553968713
RLASYLDRV	9	Unmodified	_RLASYLDRV_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8129760622978	2	546.811648	1091.60874	0.99399	0.00054353	1.3389	0.0007321	2.3328	0.0012756	546.8124329279865	30.228	0.73661	30.228	29.946	30.682	0					47	23	3	0	0	0	0.20909	2	12684	12632;12684		32.037	3.8206	1	3371600			28612	1724	14181	14239	32785;32786	32786					0.06660236600191638
RLASYLDRV	9	Unmodified	_RLASYLDRV_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8127929568291	2	546.811648	1091.60874	1.1051	0.00060426	0.81867	0.00044766	1.9237	0.0010519	546.8119757075083	29.793	0.48143	30.079	29.871	30.353	0.2859					34	15	3	0	0	0	0.16434	1	12477	12477		37.075	8.5878	1	4270900			28613	1724	14181	14239	32787	32787					0.06660236600191638
RLASYLDRV	9	Unmodified	_RLASYLDRV_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8119994997978	2	546.811648	1091.60874	0.79346	0.00043387	0.23026	0.00012591	1.0237	0.00055978	546.8116678872784	28.526	0.52014	29.805	29.515	30.035	1.2789					51	16	4	0	0	0	0.043434	2	11978	11936;11978		73.196	30.525	1	12207000			28614	1724	14181	14239	32788;32789	32789					0.06660236600191638
RLASYLDRV	9	Unmodified	_RLASYLDRV_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8127929568291	2	546.811648	1091.60874	0.71066	0.0003886	0.80318	0.00043919	1.5138	0.00082779	546.8120097585053	27.906	0.52082	29.682	29.418	29.939	1.7754					46	16	4	0	0	0	0.087985	2	11670	11670;11708		53.317	24.235	1	16800000			28615	1724	14181	14239	32790;32791	32790					0.06660236600191638
RLAVALTDMV	10	Unmodified	_RLAVALTDMV_					0	0	0			REV__nc|ENSG00000170011|Q8NFW9-5|MYRIP	REV__nc|ENSG00000170011|Q8NFW9-5|MYRIP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2531005740166	3	363.542598	1087.60597	0.64311	0.0002338	-1.4403	-0.00052361	-0.79718	-0.00028981	363.54206042162787	25.488	0.6768	25.74	25.305	25.982	0.25197					31	21	2	0	0	0	0.12559	1	10532	10532		0.77653	0.77653	1	372020	+		28616	10972	14182	14240	32792	32792					0.06566645150996919
RLAVYIDRV	9	Unmodified	_RLAVYIDRV_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;ENST00000470199.2_1_1:156084502-156100509:+|nuORF	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8321411013603	2	552.82984	1103.64513	0.51263	0.0002834	1.1238	0.00062127	1.6364	0.00090467	552.8309807289005	31.804	0.33512	33.085	32.895	33.231	1.2813					21	10	3	0	0	0	0.33297	2	13367	13313;13367		23.79	8.99	1	1653200			28617	3576	14183	14241	32793;32794	32794					0.09745113496887825
RLAVYIDRV	9	Unmodified	_RLAVYIDRV_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA;ENST00000470199.2_1_1:156084502-156100509:+|nuORF	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8304321169853	2	552.82984	1103.64513	0.77256	0.00042709	1.0699	0.00059149	1.8425	0.0010186	552.8306591045394	31.223	0.32066	33.048	32.865	33.186	1.8246					18	10	2	0	0	0	0.26473	1	13067	13067		27.223	11.376	1	1364500			28618	3576	14183	14241	32795	32795					0.09745113496887825
RLCLRRPRQR	10	Unmodified	_RLCLRRPRQR_					0	0	0			REV__ENST00000601529.5_1_19:17337661-17339066:+|nuORF	REV__ENST00000601529.5_1_19:17337661-17339066:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	339.2084228396416	4	339.20847	1352.80477	1.1507	0.00039033	0.97593	0.00033104	2.1266	0.00072138	339.2080321400628	39.818	0.77192	40.131	39.578	40.35	0.31263					49	24	3	0	0	0	0.8974	1	16769	16769		1.7423	0.63252	1	1506100	+		28619	14105	14184	14242	32796	32796					0.1424834329307032
RLCLRRPRQR	10	Unmodified	_RLCLRRPRQR_					0	0	0			REV__ENST00000601529.5_1_19:17337661-17339066:+|nuORF	REV__ENST00000601529.5_1_19:17337661-17339066:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	339.20847	1352.80477	0.64103	0.00021744	0.029917	1.0148E-05	0.67094	0.00022759	339.20825754851415	38.613	1.3485	40.45	39.564	40.913	1.8366	0.10514	-0.00016153	NaN	1.7423	94	42	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3127000	+		28620	14105	14184	14242							0.1424834329307032
RLDDLFILV	9	Unmodified	_RLDDLFILV_					0	0	0		nc|ENSG00000076356|O75051-2|PLXNA2;PLXNA2|p.A1834Efs*28|1|0.04|ENSG00000076356|chr1:208028099-208028100|-/CTGCCGCCGTGCCTGCTCATCCTGCTCT|frameshift_variant;ENSG00000076356|ENST00000367033|PLXNA2	nc|ENSG00000076356|O75051-2|PLXNA2	nc|ENSG00000076356|O75051-2|PLXNA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3275024294853	2	552.326599	1102.63865	1.5384	0.0008497	-1.2901	-0.00071256	0.24829	0.00013714	552.3256994464277	83.504	0.46109	85.142	84.823	85.284	1.6379					22	14	2	0	0	0	0.44062	1	35021	35021		18.373	0	1	2399300			28621	947	14185	14243	32797	32797					0.09143175545523263
RLDDSLLYL	9	Unmodified	_RLDDSLLYL_					0	0	0		ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.3064453005791	2	554.305864	1106.59717	1.435	0.00079545	1.3435	0.00074471	2.7785	0.0015402	554.3063404684292	64.635	0.38686	64.635	64.43	64.817	0					30	11	3	0	0	0	0.33297	1	26914	26914		23.79	5.6548	1	2091700			28622	1915	14186	14244	32798	32798					0.04813994786195508
RLDDSLLYL	9	Unmodified	_RLDDSLLYL_					0	0	0		ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.3072387576103	2	554.305864	1106.59717	1.8623	0.0010323	0.88155	0.00048865	2.7438	0.0015209	554.3062649702654	64.121	0.38422	64.45	64.241	64.626	0.32899					25	11	3	0	0	0	0.22861	2	26883	26835;26883		29.841	7.1043	1	2677100			28623	1915	14186	14244	32799;32800	32800					0.04813994786195508
RLDDSLLYL	9	Unmodified	_RLDDSLLYL_					0	0	0		ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3076660037041	2	554.305864	1106.59717	2.8592	0.0015848	0.3804	0.00021086	3.2396	0.0017957	554.3057974874849	62.884	0.37078	64.298	64.131	64.502	1.4134					36	11	4	0	0	0	0.11669	1	26380	26380		43.772	7.6454	1	8427200			28624	1915	14186	14244	32801	32801					0.04813994786195508
RLDDSLLYL	9	Unmodified	_RLDDSLLYL_					0	0	0		ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	ENSG00000115364|ENST00000393909|MRPL19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3072997927666	2	554.305864	1106.59717	3.0131	0.0016702	-0.14748	-8.1751E-05	2.8656	0.0015884	554.3054597393846	62.355	0.391	64.312	64.091	64.482	1.9571					35	12	4	0	0	0	0.11669	1	26156	26156		43.772	5.7984	1	7311800			28625	1915	14186	14244	32802	32802					0.04813994786195508
RLDELGGVYL	10	Unmodified	_RLDELGGVYL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8126098513603	2	567.811313	1133.60807	1.5607	0.00088619	1.0501	0.00059624	2.6108	0.0014824	567.8119072420676	56.404	0.95815	56.404	56.173	57.131	0					90	32	4	0	0	0	0.33708	5	23548	23449;23497;23548;23601;23662		37.075	15.198	1	53556000			28626	2045	14187	14245	32803;32804;32805;32806;32807	32805					0.04661397160475644
RLDELGGVYL	10	Unmodified	_RLDELGGVYL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.8123657107353	2	567.811313	1133.60807	2.0326	0.0011541	-0.46976	-0.00026673	1.5628	0.0008874	567.8110492027382	55.918	1.119	56.239	56.019	57.138	0.32088					90	38	4	0	0	0	0.13797	5	23392	23348;23392;23443;23500;23570		57.249	24.463	1	59783000			28627	2045	14187	14245	32808;32809;32810;32811;32812	32809					0.04661397160475644
RLDELGGVYL	10	Unmodified	_RLDELGGVYL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8123657107353	2	567.811313	1133.60807	1.6726	0.0009497	-0.28261	-0.00016047	1.3899	0.00078923	567.8111409448876	54.761	0.9209	56.166	55.867	56.788	1.4048					83	30	5	0	0	0	0.25434	4	22880	22880;22919;22972;23060		42.312	16.044	1	129200000			28628	2045	14187	14245	32813;32814;32815;32816	32813					0.04661397160475644
RLDELGGVYL	10	Unmodified	_RLDELGGVYL_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8118774294853	2	567.811313	1133.60807	1.9884	0.001129	-0.53171	-0.00030191	1.4566	0.0008271	567.810964522551	54.303	0.75229	56.271	55.97	56.722	1.9684					74	24	5	0	0	0	0.13797	5	22709	22661;22709;22748;22787;22874		57.249	30.981	1	97413000			28629	2045	14187	14245	32817;32818;32819;32820;32821	32818					0.04661397160475644
RLDLTICTL	9	Unmodified	_RLDLTICTL_					0	0	0		tr|A0A7D6ZSZ9|A0A7D6ZSZ9_9CLOTAminoglycoside6-adenylyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09525PE=4SV=1	tr|A0A7D6ZSZ9|A0A7D6ZSZ9_9CLOTAminoglycoside6-adenylyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09525PE=4SV=1	tr|A0A7D6ZSZ9|A0A7D6ZSZ9_9CLOTAminoglycoside6-adenylyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	349.8678466677666	3	349.867082	1046.57942	-1.3194	-0.00046161	2.0507	0.00071746	0.73127	0.00025585	349.86803398375946	71.22	0.44254	71.22	70.972	71.415	0					33	13	3	0	0	0	0.76103	1	29642	29642		4.897	0	1	1212300			28630	17139	14188	14246	32822	32822					0.05798956259695842
RLEQRRDRKYY	11	Unmodified	_RLEQRRDRKYY_					0	0	0			REV__ENSG00000169992|ENST00000302926|NLGN2	REV__ENSG00000169992|ENST00000302926|NLGN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1582.589648425579	1	1582.85608	1581.84881	-0.083986	-0.00013294	-0.074227	-0.00011749	-0.15821	-0.00025043	1582.8559714657636	35.205	0.040787	36.479	36.454	36.495	1.2746					7	4	2	0	0	0	0.14606	1	14778	14778		0	0	1	3474600	+		28631	10970	14189	14247	32823	32823					0.08115606200408365
RLFADILNDV	10	Unmodified	_RLFADILNDV_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3247558474541	2	588.324588	1174.63462	1.3129	0.00077243	-2.9103	-0.0017122	-1.5974	-0.00093979	588.3223277371914	70.795	0.66199	71.119	70.769	71.431	0.32359					44	20	3	0	0	0	0.091617	1	29696	29696		65.474	17.725	1	2725500			28632	2930	14190	14248	32824	32824					0.05429086051799459
RLFADILNDV	10	Unmodified	_RLFADILNDV_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3259765505791	2	588.324588	1174.63462	2.4415	0.0014364	-1.2861	-0.00075667	1.1553	0.00067972	588.3229706053655	69.67	0.79613	71.036	70.645	71.441	1.3657					39	25	2	0	0	0	0.11282	2	29276	29239;29276		140.63	61.905	1	8457000			28633	2930	14190	14248	32825;32826	32826					0.05429086051799459
RLFADILNDV	10	Unmodified	_RLFADILNDV_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3257324099541	2	588.324588	1174.63462	1.5157	0.0008917	0.57095	0.00033591	2.0866	0.0012276	588.3247553304396	69.204	0.65304	71.057	70.766	71.419	1.853					36	20	2	0	0	0	0.064585	1	29043	29043		114.19	54.113	1	7787000			28634	2930	14190	14248	32827	32827					0.05429086051799459
RLFADILNDV	10	Unmodified	_RLFADILNDV_					0	0	0		ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	ENSG00000140688|ENST00000327237|RUSF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	588.324588	1174.63462	1.807	0.0010631	-3.3874	-0.0019929	-1.5804	-0.00092977	588.3219585671837	71.468	0.53872	71.468	71.194	71.732	0	0.29787	-0.0026216	NaN	114.19	39	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3200600			28635	2930	14190	14248							0.05429086051799459
RLFAMLIYVL	10	Unmodified	_RLFAMLIYVL_					0	0	0		tr|A0A553SLI7|A0A553SLI7_NIACIDUF4870domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20715PE=4SV=1	tr|A0A553SLI7|A0A553SLI7_NIACIDUF4870domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20715PE=4SV=1	tr|A0A553SLI7|A0A553SLI7_NIACIDUF4870domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20715PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8708373904228	2	619.87012	1237.72569	2.0914	0.0012964	-1.389	-0.000861	0.70245	0.00043543	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.89588	1	33313	33313		1.6526	0	1	9211600			28636	16334	14191	14249	32828	32828					0.11633258495589871
RLFDEPQLA	9	Unmodified	_RLFDEPQLA_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MSMS	GG20161007_CRH_Patient100_A02_01	1	544.7899047732353	2	544.790381	1087.56621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.636	1	42.636	42.136	43.136	0								0	0	0	0.42693	1	17843	17843		5.7319	1.4026	1				28637	2566	14192	14250	32829	32829					0.025928414719373905
RLFDEPQLA	9	Unmodified	_RLFDEPQLA_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.7906982302666	2	544.790381	1087.56621	1.788	0.00097409	1.3512	0.0007361	3.1392	0.0017102	544.7912838358351	42.269	0.36547	42.589	42.452	42.818	0.32058					21	11	2	0	0	0	0.6486	2	17736	17736;17785		9.3831	5.0539	1	676610			28638	2566	14192	14250	32830;32831	32830					0.025928414719373905
RLFDEPQLA	9	Unmodified	_RLFDEPQLA_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7910034060478	2	544.790381	1087.56621	2.2244	0.0012118	-1.0432	-0.00056835	1.1811	0.00064346	544.7901549989409	40.681	0.62754	42.007	41.74	42.368	1.3254					30	19	2	0	0	0	0.37774	1	17029	17029		21.537	9.8967	1	2243400			28639	2566	14192	14250	32832	32832					0.025928414719373905
RLFDEPQLA	9	Unmodified	_RLFDEPQLA_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7895385622978	2	544.790381	1087.56621	2.0494	0.0011165	-0.0026382	-1.4373E-06	2.0467	0.001115	544.7901287152982	40.302	0.52813	42.165	41.894	42.422	1.8624					30	16	2	0	0	0	0.28372	2	16879	16879;16982		26.268	11.863	1	1748100			28640	2566	14192	14250	32833;32834	32833					0.025928414719373905
RLFDEPQLASL	11	Unmodified	_RLFDEPQLASL_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	645.3525268435478	2	644.848427	1287.6823	2.4272	0.0015652	0.89716	0.00057853	3.3244	0.0021437	644.8490885460177	60.911	0.408	60.911	60.734	61.142	0					27	12	3	0	0	0	0.19131	2	25417	25368;25417		40.725	25.476	1	811590			28641	2566	14193	14251	32835;32836	32836					0.04996740251999654
RLFDEPQLASL	11	Unmodified	_RLFDEPQLASL_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	644.8502685427666	2	644.848427	1287.6823	2.1427	0.0013817	0.91089	0.00058739	3.0536	0.0019691	644.8489735975264	60.308	0.44513	60.636	60.442	60.887	0.32809					32	13	3	0	0	0	0.27409	2	25287	25238;25287		34.222	18.973	1	828470			28642	2566	14193	14251	32837;32838	32838					0.04996740251999654
RLFDEPQLASL	11	Unmodified	_RLFDEPQLASL_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.8493530154228	2	644.848427	1287.6823	1.9218	0.0012393	-0.33872	-0.00021842	1.5831	0.0010208	644.8483357097251	59.109	0.60596	60.528	60.32	60.926	1.4196					54	19	4	0	0	0	0.0013356	3	24792	24744;24792;24841		121.5	69.873	1	5292100			28643	2566	14193	14251	32839;32840;32841	32840					0.04996740251999654
RLFDEPQLASL	11	Unmodified	_RLFDEPQLASL_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000064726|Q9H0C5-2|BTBD1;ENSG00000064726|ENST00000261721|BTBD1;ENST00000587225.1_1_19:1989877-1990887:-|nuORF	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.8490478396416	2	644.848427	1287.6823	1.9411	0.0012517	-0.24952	-0.0001609	1.6916	0.0010908	644.8484115948758	58.62	0.51144	60.589	60.429	60.94	1.969					47	16	3	0	0	0	0.0029592	3	24595	24553;24595;24653		128.58	76.949	1	5988600			28644	2566	14193	14251	32842;32843;32844	32843					0.04996740251999654
RLFDQAFGL	9	Unmodified	_RLFDQAFGL_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1923705935478	2	533.787641	1065.56073	1.9838	0.0010589	-1.5083	-0.00080514	0.47549	0.00025381	533.7876714599208	62.91	0.28157	63.239	63.067	63.349	0.32974					13	8	2	0	0	0	0.11684	1	26320	26320		7.9102	3.5809	1	982130			28645	1559	14194	14252	32845	32845					0.030571626801247476
RLFENYIEL	9	Unmodified	_RLFENYIEL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	598.8190795779228	2	598.819138	1195.62372	2.2817	0.0013663	-0.51951	-0.00031109	1.7622	0.0010553	598.8188821919047	64.331	0.3199	64.331	64.174	64.494	0					20	9	3	0	0	0	0.3091	2	26799	26799;26850		24.991	4.9566	1	1099700			28646	1791	14195	14253	32846;32847	32846					0.03373683677500594
RLFENYIEL	9	Unmodified	_RLFENYIEL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.8197509646416	2	598.819138	1195.62372	2.9546	0.0017693	-0.79514	-0.00047615	2.1594	0.0012931	598.818710763631	62.505	0.39246	63.919	63.711	64.103	1.4134					41	12	4	0	0	0	0.043696	2	26223	26172;26223		72.968	20.7	1	7341200			28647	1791	14195	14253	32848;32849	32849					0.03373683677500594
RLFENYIEL	9	Unmodified	_RLFENYIEL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.8203002810478	2	598.819138	1195.62372	2.9114	0.0017434	-0.54475	-0.00032621	2.3666	0.0014172	598.8188496927287	61.962	0.40236	63.919	63.689	64.091	1.9571					36	12	4	0	0	0	0.043696	2	25951	25951;26002		72.968	21.338	1	6464000			28648	1791	14195	14253	32850;32851	32850					0.03373683677500594
RLFENYIEL	9	Unmodified	_RLFENYIEL_					0	0	0		ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	ENSG00000112685|ENST00000230449|EXOC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	598.819138	1195.62372	1.796	0.0010755	0.67318	0.00040311	2.4692	0.0014786	598.8196804105152	63.784	0.39027	64.113	63.883	64.273	0.32899	0.042478	0.0012117	NaN	72.968	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1267300			28649	1791	14195	14253							0.03373683677500594
RLFIKKFK	8	Unmodified	_RLFIKKFK_					0	0	0		ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.5745727419853	3	360.57445	1078.70152	0.4203	0.00015155	0.9613	0.00034662	1.3816	0.00049817	360.574684710464	21.693	0.89447	21.916	21.453	22.347	0.223					85	29	4	0	0	0	0.89187	2	9053	9053;9111		0.40072	0	1	9772800			28650	6229	14196	14254	32852;32853	32852					0.16531786124232895
RLFIKKFK	8	Unmodified	_RLFIKKFK_					0	0	0		ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5753661990166	3	360.57445	1078.70152	-0.27624	-9.9606E-05	2.0434	0.00073678	1.7671	0.00063718	360.57504615525505	20.735	0.80494	21.86	21.414	22.219	1.1254					87	26	5	0	0	0	0.89198	1	8655	8655		0	0	1	10923000			28651	6229	14196	14254	32854	32854					0.16531786124232895
RLFIKKFK	8	Unmodified	_RLFIKKFK_					0	0	0		ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	ENST00000380888.4_1_20:29523054-29523153:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5746337771416	3	360.57445	1078.70152	0.032295	1.1645E-05	1.0628	0.00038321	1.0951	0.00039485	360.57472167988277	20.079	0.9906	21.602	21.108	22.098	1.5237					102	32	4	0	0	0	0.89187	2	8417	8417;8471		0.40072	0	1	12921000			28652	6229	14196	14254	32855;32856	32855					0.16531786124232895
RLFKKLIL	8	Unmodified	_RLFKKLIL_					0	0	0		ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF	ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2468139529228	3	344.2427	1029.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.656	1	94.801	94.301	95.301	0.14493								0	0	0	1.0178	1	39614	39614		0.45834	0	1				28653	4995	14197	14255	32857	32857					0.19260670266999114
RLFKKLIL	8	Unmodified	_RLFKKLIL_					0	0	0		ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF	ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2448913455009	3	344.2427	1029.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.776	1	94.899	94.399	95.399	0.12331								0	0	0	1.0178	1	39662	39662		0.45834	0	1				28654	4995	14197	14255	32858	32858					0.19260670266999114
RLFKKLIL	8	Unmodified	_RLFKKLIL_					0	0	0		ENSG00000197299|ENST00000355112|BLM;ENST00000558825.5_1_15:91337395-91358506:+|nuORF	ENSG00000197299|ENST00000355112|BLM	ENSG00000197299|ENST00000355112|BLM	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2442809939384	3	344.2427	1029.70627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.888	1	95.011	94.511	95.511	0.12331								0	0	0	1.0178	1	39708	39708		0.45834	0	1				28655	4995	14197	14255	32859	32859					0.19260670266999114
RLFKKYSF	8	Unmodified	_RLFKKYSF_					0	0	0		ENSG00000117308|ENST00000617979|GALE;ENST00000459934.5_1_1:24122658-24127224:-|nuORF	ENSG00000117308|ENST00000617979|GALE	ENSG00000117308|ENST00000617979|GALE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3192626833916	2	544.816202	1087.61785	1.4953	0.00081465	2.7728	0.0015107	4.2681	0.0023253	545.3176531865614	68.729	1.0797	70.582	70.056	71.136	1.853					44	34	2	0	0	0	0.88504	1	28723	28723		5.7604	0	1	2821900			28656	2003	14198	14256	32860	32860					0.07754629956502868
RLFMYKKKQR	10	Unmodified	_RLFMYKKKQR_					0	0	0			REV__ENST00000395323.7_1_2:30480899-30480941:+|nuORF	REV__ENST00000395323.7_1_2:30480899-30480941:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.6096374392509	3	466.611458	1396.81254	1.7877	0.00083414	-4.0992	-0.0019128	-2.3116	-0.0010786	466.60911051773303	97.637	0.18319	97.637	97.507	97.69	0					9	5	3	0	0	0	0.89803	1	40817	40817		0.69767	0.24315	1	3479200	+		28657	12838	14199	14257	32861	32861					0.13001057769974977
RLFMYKKKQR	10	Unmodified	_RLFMYKKKQR_					0	0	0			REV__ENST00000395323.7_1_2:30480899-30480941:+|nuORF	REV__ENST00000395323.7_1_2:30480899-30480941:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	466.611458	1396.81254	3.4232	0.0015973	-8.5188	-0.003975	-5.0956	-0.0023777	466.60771991351885	97.607	0.094261	97.698	97.62	97.715	0.090881	0.030479	-0.0022634	NaN	0.69767	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2331200	+		28658	12838	14199	14257							0.13001057769974977
RLFNDPVAMV	10	Unmodified	_RLFNDPVAMV_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	581.3097411990166	2	581.307884	1160.60121	1.983	0.0011527	1.4094	0.00081931	3.3924	0.001972	581.3080567550741	55.549	0.31207	55.87	55.707	56.019	0.32088					21	9	3	0	0	0	0.70123	2	23254	23254;23310		18.373	7.5492	1	1532700			28659	6671;5237	14200	14258	32862;32863	32862					0.027337610082440733
RLFNDPVAMV	10	Unmodified	_RLFNDPVAMV_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3088256716728	2	581.307884	1160.60121	1.6633	0.00096691	2.0366	0.0011839	3.6999	0.0021508	581.30803123603	54.335	0.38046	55.74	55.551	55.931	1.4048					30	11	4	0	0	0	0.21129	2	22753	22706;22753		47.594	24.446	1	6830100			28660	6671;5237	14200	14258	32864;32865	32865					0.027337610082440733
RLFNDPVAMV	10	Unmodified	_RLFNDPVAMV_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3082153201103	2	581.307884	1160.60121	1.1809	0.00068649	0.59476	0.00034574	1.7757	0.0010322	581.3076141134617	53.833	0.40718	55.803	55.595	56.003	1.9697					33	12	4	0	0	0	0.14781	3	22558	22509;22558;22614		55.503	35.088	1	7181600			28661	6671;5237	14200	14258	32866;32867;32868	32867					0.027337610082440733
RLFNDPVAMV	10	Unmodified	_RLFNDPVAMV_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	581.307884	1160.60121	1.8672	0.0010854	0.9913	0.00057625	2.8585	0.0016616	581.30867968919	56.118	0.2561	56.118	55.97	56.226	0	0.23546	-0.00025586	NaN	55.503	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1723600			28662	6671;5237	14200	14258							0.027337610082440733
RLFNDPVAMVL	11	Unmodified	_RLFNDPVAMVL_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.8505737185478	2	637.849916	1273.68528	2.3595	0.001505	-1.0167	-0.00064853	1.3428	0.00085649	637.8488295622894	71.017	0.33363	72.359	72.148	72.482	1.3415					18	10	2	0	0	0	0.65349	1	29778	29778		19.626	2.5131	1	1379100			28663	6671;5237	14201	14259	32869	32869					0.05938292105133769
RLFNDPVAMVL	11	Unmodified	_RLFNDPVAMVL_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.8509399294853	2	637.849916	1273.68528	1.1978	0.00076399	-1.7075	-0.0010891	-0.50977	-0.00032516	637.8480282847294	70.509	0.27369	72.346	72.167	72.441	1.8378					17	8	3	0	0	0	0.68498	1	29543	29543		18.721	1.6083	1	1275200			28664	6671;5237	14201	14259	32870	32870					0.05938292105133769
RLFNDPVAMVL	11	Unmodified	_RLFNDPVAMVL_					0	0	0		ENST00000461415.5_1_3:183962900-183966669:-|nuORF;ENST00000477959.1_1_3:183962361-183963122:-|nuORF;ENST00000488976.5_1_3:183962900-183966721:-|nuORF;ENST00000482048.1_1_3:183962900-183966716:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	ENST00000461415.5_1_3:183962900-183966669:-|nuORF;nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	637.849916	1273.68528	1.7697	0.0011288	2.7736	0.0017691	4.5433	0.002898	637.8511632298039	72.16	0.19051	72.485	72.388	72.579	0.32494	0.088436	0.0036658	NaN	19.626	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	280610			28665	6671;5237	14201	14259							0.05938292105133769
RLFSSIVTV	9	Unmodified	_RLFSSIVTV_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3068115115166	2	511.305667	1020.59678	2.0423	0.0010442	0.3207	0.00016398	2.363	0.0012082	511.30585872009107	53.912	0.31289	54.233	54.098	54.411	0.32088					20	9	3	0	0	0	0.21592	1	22628	22628		31.268	0.6318	1	1997100			28666	3960	14202	14260	32871	32871					0.08730619857010424
RLFSSIVTV	9	Unmodified	_RLFSSIVTV_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3060790896416	2	511.305667	1020.59678	1.2269	0.00062732	-2.7328	-0.0013973	-1.5059	-0.00076998	511.3059072052009	52.66	0.50652	54.057	53.836	54.342	1.3966					48	15	4	0	0	0	0.079895	1	22053	22053		56.177	3.9087	1	8917900			28667	3960	14202	14260	32872	32872					0.08730619857010424
RLFSSIVTV	9	Unmodified	_RLFSSIVTV_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3067199587822	2	511.305667	1020.59678	1.7753	0.00090774	-2.9836	-0.0015255	-1.2083	-0.00061779	511.3059982727866	52.037	0.48999	54.009	53.799	54.289	1.9722					45	15	4	0	0	0	0.10473	1	21831	21831		47.749	3.8904	1	6514200			28668	3960	14202	14260	32873	32873					0.08730619857010424
RLGFLRLQALH	11	Unmodified	_RLGFLRLQALH_					0	0	0		nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;ENSG00000137474|ENST00000409709|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.7062560915947	4	331.705657	1322.79352	1.1785	0.00039091	1.489	0.00049393	2.6675	0.00088483	332.2068400206555	46.01	1.7584	46.339	45.724	47.482	0.32899					138	58	3	0	0	0	1.0156	1	19140	19140		2.8433	1.3882	1	5569000			28669	2769	14203	14261	32874	32874					0.1450384447059605
RLGFLRLQALH	11	Unmodified	_RLGFLRLQALH_					0	0	0		nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;ENSG00000137474|ENST00000409709|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	331.7069274783134	4	331.705657	1322.79352	1.2501	0.00041467	2.2398	0.00074297	3.49	0.0011576	331.70641335394686	44.551	0.85271	45.916	45.327	46.18	1.3653					51	26	3	0	0	0	0.14606	1	18774	18774		1.3296	0	1	6038200			28670	2769	14203	14261	32875	32875					0.1450384447059605
RLGFLRLQALH	11	Unmodified	_RLGFLRLQALH_					0	0	0		nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;ENSG00000137474|ENST00000409709|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.9582397341728	4	331.705657	1322.79352	1.7012	0.0005643	2.5876	0.00085831	4.2888	0.0014226	331.95741265139986	44.249	0.47505	46.193	45.989	46.464	1.9438					25	14	2	0	0	0	1.0362	1	18585	18585		1.3296	0.63198	1	2481500			28671	2769	14203	14261	32876	32876					0.1450384447059605
RLGGAQGG	8	Unmodified	_RLGGAQGG_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	715.3885375857353	1	715.384562	714.377286	2.6423	0.0018903	2.4323	0.00174	5.0745	0.0036302	715.3860814974734	104.43	0.092865	104.59	104.53	104.62	0.16055					12	4	4	0	0	0	0.89178	1	44230	44230		0.69038	0	1	31761000	+		28672	10868	14204	14262	32877	32877					0.008672336891550003
RLGGAQGG	8	Unmodified	_RLGGAQGG_					0	0	0			REV__nc|ENSG00000167548|O14686-3|KMT2D	REV__nc|ENSG00000167548|O14686-3|KMT2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	715.3873779177666	1	715.384562	714.377286	2.5995	0.0018596	1.367	0.00097795	3.9665	0.0028376	715.3854182195112	104.38	0.074936	104.55	104.5	104.58	0.1731					6	3	2	0	0	0	0.89178	1	44150	44150		0.69038	0	1	42505000	+		28673	10868	14204	14262	32878	32878					0.008672336891550003
RLGKAAAA	8	Unmodified	_RLGKAAAA_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	757.4693481326103	1	757.467898	756.460622	2.7298	0.0020677	-0.037483	-2.8392E-05	2.6923	0.0020394	757.4676891095568	107.94	0.22533	107.99	107.86	108.08	0.050644					32	11	4	0	0	0	0.89198	1	46333	46333		0	0	1	301770000	+		28674	11600	14205	14263	32879	32879					0.07264970136975535
RLGKAAAA	8	Unmodified	_RLGKAAAA_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.4738036990166	1	757.467898	756.460622	2.4928	0.0018882	-0.21722	-0.00016454	2.2756	0.0017237	757.4672844890017	107.89	0.19456	108.05	107.95	108.15	0.15781					37	14	3	0	0	0	0.89198	2	46490	46490;46553		0	0	1	716950000	+		28675	11600	14205	14263	32880;32881	32880					0.07264970136975535
RLGKAAAA	8	Unmodified	_RLGKAAAA_					0	0	0			REV__ENSG00000189045|ENST00000601380|ANKDD1B	REV__ENSG00000189045|ENST00000601380|ANKDD1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.4679443240166	1	757.467898	756.460622	2.7444	0.0020788	-0.9986	-0.00075641	1.7458	0.0013224	757.4668006453381	107.84	0.20335	108	107.92	108.12	0.15795					31	13	3	0	0	0	0.89198	1	46479	46479		0	0	1	1038399999.9999999	+		28676	11600	14205	14263	32882	32882					0.07264970136975535
RLGKGKYR	8	Unmodified	_RLGKGKYR_					0	0	0		tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	tr|A0A7D6W117|A0A7D6W117_9CLOTCyclicnucleotide-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01490PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	489.3046447634697	2	489.303793	976.593033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.39	1	104.55	104.05	105.05	0.16055								0	0	0	1.0178	1	44207	44207		0.69038	0	1				28677	17017	14206	14264	32883	32883					0.10379994873801479
RLGLLGLFH	9	Unmodified	_RLGLLGLFH_					0	0	0			REV__EFCAB6|p.R784H|1|0.79|ENSG00000186976|chr22:43626561-43626561|C/T|missense_variant	REV__EFCAB6|p.R784H|1|0.79|ENSG00000186976|chr22:43626561-43626561|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.5468322634697	3	342.546671	1024.61818	0.363	0.00012434	1.6047	0.00054967	1.9677	0.00067402	342.5468806302398	30.941	0.74052	32.756	32.325	33.066	1.8151					62	24	3	0	0	0	0.76456	1	12899	12899		2.7352	0	1	2842800	+		28678	8469	14207	14265	32884	32884					0.10686049676382936
RLGPILPKLRK	11	Unmodified	_RLGPILPKLRK_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-7|BDP1	REV__nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.4725829958916	4	323.473766	1289.86596	-2.7058	-0.00087525	-0.43037	-0.00013921	-3.1361	-0.0010145	323.47394991186593	27.306	0.60932	27.306	26.922	27.532	0					69	19	5	0	0	0	1.0402	1	11381	11381		0.094841	0	1	68842000	+		28679	10283	14208	14266	32885	32885					0.23262178544155176
RLGPILPKLRK	11	Unmodified	_RLGPILPKLRK_					0	0	0			REV__nc|ENSG00000145734|A6H8Y1-7|BDP1	REV__nc|ENSG00000145734|A6H8Y1-7|BDP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	323.473766	1289.86596	0.3022	9.7754E-05	-2.4417	-0.00078984	-2.1395	-0.00069208	323.4732323245927	26.924	1.1699	27.186	26.592	27.762	0.26173	-0.060044	-0.0013123	NaN	0.094841	112	37	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13478000	+		28680	10283	14208	14266							0.23262178544155176
RLGQLRRLD	9	Unmodified	_RLGQLRRLD_					0	0	0		ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	ENSG00000255690|ENST00000539664|TRIL	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2326843142509	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.843	1	64.843	64.343	65.343	0								0	0	0	0.42693	1	27026	27026		0.96228	0	1				28681	5405	14209	14267	32886	32886					0.11526436476992785
RLGRLWNRLFH	11	Unmodified	_RLGRLWNRLFH_					0	0	0		ENST00000590278.1_1_19:33696051-33698478:+|nuORF;ENSG00000130881|ENST00000253193|LRP3	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	ENST00000590278.1_1_19:33696051-33698478:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	367.7171508669853	4	367.716556	1466.83712	-0.051507	-1.894E-05	2.4519	0.0009016	2.4004	0.00088266	367.7173385562626	52.428	1.1378	53.825	53.46	54.598	1.3966					70	35	3	0	0	0	1.0362	1	21927	21927		1.3296	0.21989	1	4176000			28682	2468	14210	14268	32887	32887					0.12237453967713918
RLHARLQKRRW	11	Unmodified	_RLHARLQKRRW_					0	0	0			REV__nc|ENSG00000214022|Q9BWE0|REPIN1	REV__nc|ENSG00000214022|Q9BWE0|REPIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3117248415947	3	507.311282	1518.91202	2.4462	0.001241	-1.9069	-0.00096741	0.53927	0.00027358	507.31038140851825	90.796	1.1557	90.796	90.032	91.188	0					80	36	3	0	0	0	1.0402	1	37843	37843		0.08335	0.08335	1	2075400	+		28683	11847	14211	14269	32888	32888					0.17331636498965963
RLHEELVLGR	10	Unmodified	_RLHEELVLGR_					0	0	0		tr|A0A7D6VYA6|A0A7D6VYA6_9CLOTCoproporphyrinogenIIIoxidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15060PE=4SV=1	tr|A0A7D6VYA6|A0A7D6VYA6_9CLOTCoproporphyrinogenIIIoxidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15060PE=4SV=1	tr|A0A7D6VYA6|A0A7D6VYA6_9CLOTCoproporphyrinogenIIIoxidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15060PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3594238162041	2	611.356754	1220.69895	2.531	0.0015474	-0.25657	-0.00015686	2.2744	0.0013905	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.83797	1	32985	32985		8.1555	1.4324	1	7141600			28684	16998	14212	14270	32889	32889					0.09743285928561818
RLHKQRKLISR	11	Unmodified	_RLHKQRKLISR_					0	0	0			REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	REV__nc|ENSG00000127423|Q9H7T9-2|AUNIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4827758669853	4	359.48366	1433.90553	-0.24428	-8.7814E-05	-1.7993	-0.00064684	-2.0436	-0.00073465	359.48291863379364	28.8	2.1919	30.082	29.125	31.317	1.2825					177	71	5	0	0	0	1.0393	1	12004	12004		0.36667	0.037403	1	23719000	+		28685	14425	14213	14271	32890	32890					0.2059369854760007
RLHLKKNPK	9	Unmodified	_RLHLKKNPK_					0	0	0		ENST00000588195.5_1_19:1483001-1490375:-|nuORF;ENSG00000115257|ENST00000300954|PCSK4;ENST00000441747.6_1_19:1482426-1490130:-|nuORF;ENST00000586616.5_1_19:1483766-1490130:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	ENST00000588195.5_1_19:1483001-1490375:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3651000857353	2	567.366924	1132.7193	0.90278	0.00051221	-2.9671	-0.0016834	-2.0643	-0.0011712	567.3652484905301	29.837	0.21427	31.119	31.072	31.287	1.2825					9	6	2	0	0	0	0.77526	1	12531	12531		4.3292	0	1	565070			28686	7463	14214	14272	32891	32891					0.1582450137905198
RLHQLTRR	8	Unmodified	_RLHQLTRR_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3320190310478	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89181	2	29001	29001;29469		0.6015	0	1	3238400			28687	4515	14215	14273	32892;32893	32892					0.11101587025336812
RLHQLTRR	8	Unmodified	_RLHQLTRR_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3318969607353	2	540.330873	1078.64719	1.3314	0.00071939	-0.14908	-8.0553E-05	1.1823	0.00063884	540.3307178135227	69.951	1.3958	70.273	69.312	70.708	0.32224					115	44	3	0	0	0	0.89181	3	29150	29150;29203;29254		0.6015	0	1	4212400			28688	4515	14215	14273	32894;32895;32896	32894					0.11101587025336812
RLIDLGVGL	9	Unmodified	_RLIDLGVGL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3018981814384	2	478.300384	954.586216	2.9381	0.0014053	-0.10915	-5.2205E-05	2.829	0.0013531	478.30038547718146	60.283	0.39598	61.702	61.507	61.903	1.4196					26	12	3	0	0	0	0.15456	1	25315	25315		38.176	5.8701	1	4066500			28689	1998	14216	14274	32897	32897					0.10710637202555517
RLIDLGVGL	9	Unmodified	_RLIDLGVGL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	478.300384	954.586216	2.5188	0.0012048	0.29829	0.00014267	2.8171	0.0013474	478.3003334189758	62.042	0.31282	62.042	61.899	62.211	0	0.21381	0.00029996	NaN	38.176	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2333500			28690	1998	14216	14274							0.10710637202555517
RLIDLGVGL	9	Unmodified	_RLIDLGVGL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	478.300384	954.586216	2.8292	0.0013532	-0.37492	-0.00017932	2.4543	0.0011739	478.30012165806255	61.459	0.40194	61.789	61.61	62.012	0.32974	-0.038992	-0.00034404	NaN	38.176	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1981000			28691	1998	14216	14274							0.10710637202555517
RLIDLGVGL	9	Unmodified	_RLIDLGVGL_					0	0	0		nc|ENSG00000117139|Q9UGL1-2|KDM5B;ENSG00000117139|ENST00000367265|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	nc|ENSG00000117139|Q9UGL1-2|KDM5B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	478.300384	954.586216	2.9804	0.0014255	0.13172	6.3002E-05	3.1121	0.0014885	478.30039045434154	59.81	0.36826	61.779	61.582	61.95	1.969	-0.048998	0.00014061	NaN	38.176	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3803800			28692	1998	14216	14274							0.10710637202555517
RLIEFAYTA	9	Unmodified	_RLIEFAYTA_					0	0	0		ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2988159060478	2	542.295299	1082.57605	2.2249	0.0012066	3.076	0.0016681	5.301	0.0028747	542.2975001666856	45.409	0.29226	46.774	46.628	46.92	1.3653					12	8	2	0	0	0	0.59568	1	19021	19021		11.495	1.4208	1	829760			28693	997	14217	14275	32898	32898					0.038060294773458736
RLIESLFTI	9	Unmodified	_RLIESLFTI_					0	0	0		ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1;GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	ENSG00000077235|ENST00000356183|GTF3C1	ENSG00000077235|ENST00000356183|GTF3C1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3269531130791	2	546.326599	1090.63865	1.4614	0.0007984	-2.1179	-0.0011571	-0.65648	-0.00035865	546.3250484530066	72.958	0.74606	72.958	72.745	73.491	0					44	23	3	0	0	0	0.093059	1	30366	30366		51.63	3.8811	1	4389900			28694	957	14218	14276	32899	32899					0.09695175545539314
RLIESLFTI	9	Unmodified	_RLIESLFTI_					0	0	0		ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1;GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	ENSG00000077235|ENST00000356183|GTF3C1	ENSG00000077235|ENST00000356183|GTF3C1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3269531130791	2	546.326599	1090.63865	1.9432	0.0010616	-2.6961	-0.001473	-0.75287	-0.00041131	546.3250071982484	72.364	2.9501	72.689	71.914	74.864	0.32494					56	21	4	0	0	0	0.053939	1	30270	30270		66.457	3.884	1	5247000			28695	957	14218	14276	32900	32900					0.09695175545539314
RLIESLFTI	9	Unmodified	_RLIESLFTI_					0	0	0		ENSG00000077235|ENST00000356183|GTF3C1;nc|ENSG00000077235|Q12789-3|GTF3C1;GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	ENSG00000077235|ENST00000356183|GTF3C1	ENSG00000077235|ENST00000356183|GTF3C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3179199099541	2	546.326599	1090.63865	2.3594	0.001289	0.93687	0.00051184	3.2963	0.0018009	546.3269448933894	71.064	0.32499	72.406	72.364	72.689	1.3415					33	10	4	0	0	0	0.075994	2	29812	29812;29824		57.722	5.7984	1	28931000			28696	957	14218	14276	32901;32902	32901					0.09695175545539314
RLIFVFFLVE	10	Unmodified	_RLIFVFFLVE_					0	0	0		ENST00000381297.9_1_X:1584011-1584302:-|nuORF	ENST00000381297.9_1_X:1584011-1584302:-|nuORF	ENST00000381297.9_1_X:1584011-1584302:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8842651247978	2	641.881542	1281.74853	2.4082	0.0015458	1.7417	0.001118	4.1499	0.0026637	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	0.89803	1	33895	33895		1.6526	0.17072	1	10623000			28697	6232	14219	14277	32903	32903					0.1189260088467563
RLIIWGVLEL	10	Unmodified	_RLIIWGVLEL_					0	0	0		PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant;ENSG00000205038|ENST00000378402|PKHD1L1	PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant	PKHD1L1|p.L3900Ffs*38|1|0.28|ENSG00000205038|chr8:109518174-109518174|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5365173220634	4	303.693221	1210.74378	-0.1925	-5.846E-05	1.2842	0.00039001	1.0917	0.00033155	303.69356837698035	21.716	1.2298	23.332	23.02	24.25	1.6158					94	40	3	0	0	0	0.12549	1	9251	9251		3.5871	0.74377	1	6484900			28698	5172	14220	14278	32904	32904					0.14683716741956232
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.9759094119072	3	478.975788	1433.90553	1.7693	0.00084743	-1.4453	-0.00069225	0.32398	0.00015518	478.9750702569112	97.243	0.15581	97.243	97.165	97.321	0					15	4	4	0	0	0	1.0254	1	40659	40659		2.2527	1.8445	1	15880000	+		28699	10898	14221	14279	32905	32905					0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	478.975788	1433.90553	1.7693	0.00084743	-1.4453	-0.00069225	0.32398	0.00015518	478.9750702569112	97.243	0.15581	97.243	97.165	97.321	0	-0.053686	0.0017103	NaN	2.2527	15	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15880000	+		28700	10898	14221	14279							0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	478.975788	1433.90553	3.5319	0.0016917	-3.655	-0.0017507	-0.12314	-5.898E-05	478.97397802088227	97.228	0.22147	97.319	97.21	97.431	0.090881	0.022571	-0.001465	NaN	2.2527	19	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22079000	+		28701	10898	14221	14279							0.20593698547577333
RLIKRHKQVRT	11	Unmodified	_RLIKRHKQVRT_					0	0	0			REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	REV__ENST00000443339.5_1_3:9475802-9506425:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	478.975788	1433.90553	3.8809	0.0018588	-2.7714	-0.0013274	1.1095	0.00053141	478.97441439922784	97.043	0.14828	97.328	97.242	97.39	0.28442	0.031115	-0.00019527	NaN	2.2527	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5183000	+		28702	10898	14221	14279							0.20593698547577333
RLILEIKKQL	10	Unmodified	_RLILEIKKQL_					0	0	0		ENST00000529787.2_1_9:100092438-100109914:+|nuORF;CCDC180|p.H1510Ffs*11|1|0.03|ENSG00000197816|chr9:97370685-97370686|-/TT|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	627.4200927615166	2	627.418823	1252.82309	2.653	0.0016645	-2.53	-0.0015874	0.12301	7.7177E-05	627.4181541527086	105.95	0.11984	106.01	105.94	106.06	0.054558					17	5	4	0	0	0	0.88022	1	45031	45031		3.5965	0	1	71032000			28703	124	14222	14280	32906	32906					0.20679363696081055
RLILEIKKQL	10	Unmodified	_RLILEIKKQL_					0	0	0		ENST00000529787.2_1_9:100092438-100109914:+|nuORF;CCDC180|p.H1510Ffs*11|1|0.03|ENSG00000197816|chr9:97370685-97370686|-/TT|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.4208862185478	2	627.418823	1252.82309	2.8807	0.0018074	-2.1968	-0.0013783	0.68386	0.00042907	627.4173728899001	105.93	0.23254	106.08	105.91	106.14	0.15859					30	11	5	0	0	0	0.88022	1	45206	45206		3.5965	0	1	345560000			28704	124	14222	14280	32907	32907					0.20679363696081055
RLILEIKKQL	10	Unmodified	_RLILEIKKQL_					0	0	0		ENST00000529787.2_1_9:100092438-100109914:+|nuORF;CCDC180|p.H1510Ffs*11|1|0.03|ENSG00000197816|chr9:97370685-97370686|-/TT|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	627.418823	1252.82309	1.5331	0.00096191	-1.3095	-0.0008216	0.22363	0.00014031	627.4188062394591	105.98	0.11852	105.98	105.93	106.05	0	-0.052668	0.0012463	NaN	3.5965	16	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65457000			28705	124	14222	14280							0.20679363696081055
RLILEIKKQL	10	Unmodified	_RLILEIKKQL_					0	0	0		ENST00000529787.2_1_9:100092438-100109914:+|nuORF;CCDC180|p.H1510Ffs*11|1|0.03|ENSG00000197816|chr9:97370685-97370686|-/TT|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	627.418823	1252.82309	2.7187	0.0017057	-2.9961	-0.0018798	-0.27744	-0.00017407	627.4173586877774	105.9	0.16025	106.06	105.97	106.13	0.16679	0.030074	-0.00087009	NaN	3.5965	20	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275980000			28706	124	14222	14280							0.20679363696081055
RLILGLIMPPA	11	Unmodified	_RLILGLIMPPA_					0	0	0		ANXA6|p.M433I|1|0.18|ENSG00000197043|chr5:151122195-151122195|C/G|missense_variant	ANXA6|p.M433I|1|0.18|ENSG00000197043|chr5:151122195-151122195|C/G|missense_variant	ANXA6|p.M433I|1|0.18|ENSG00000197043|chr5:151122195-151122195|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.5857421755791	3	398.586138	1192.73659	0.69319	0.0002763	-1.6324	-0.00065067	-0.93924	-0.00037437	398.58536402258113	32.247	0.54592	34.071	33.789	34.335	1.8246					31	18	2	0	0	0	1.0357	1	13564	13564		1.4551	0.49284	1	4117400			28707	65	14223	14281	32908	32908					0.14792660869875363
RLILIKRRYQL	11	Unmodified	_RLILIKRRYQL_					0	0	0		tr|A0A553SRN1|A0A553SRN1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01315PE=4SV=1	tr|A0A553SRN1|A0A553SRN1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01315PE=4SV=1	tr|A0A553SRN1|A0A553SRN1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01315PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3243896365166	3	491.324305	1470.95109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.245	1	99.47	98.97	99.97	0.22545								0	0	0	0.63775	1	41758	41758		0	0	1				28708	16568	14224	14282	32909	32909					0.2344492400998206
RLINQVLEL	9	Unmodified	_RLINQVLEL_					0	0	0		ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	ENSG00000153130|ENST00000608372|SCOC	ENSG00000153130|ENST00000608372|SCOC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.3376342654228	2	549.337498	1096.66044	0.072041	3.9575E-05	0.78647	0.00043204	0.85851	0.00047161	549.337721966131	56.259	0.29315	57.669	57.579	57.872	1.4099					12	9	2	0	0	0	0.18809	1	23574	23574		34.402	8.1336	1	2880700			28709	3346	14225	14283	32910	32910					0.1159798029407284
RLINQVLEL	9	Unmodified	_RLINQVLEL_					0	0	0		ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	ENSG00000153130|ENST00000608372|SCOC	ENSG00000153130|ENST00000608372|SCOC	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.337498	1096.66044	2.3148	0.0012716	0.69118	0.00037969	3.0059	0.0016513	549.3378938205236	57.454	0.24444	57.777	57.673	57.917	0.32298	0.073629	0.00015701	NaN	34.402	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612480			28710	3346	14225	14283							0.1159798029407284
RLINQVLEL	9	Unmodified	_RLINQVLEL_					0	0	0		ENSG00000153130|ENST00000608372|SCOC;nc|ENSG00000153130|Q9UIL1-3|SCOC;nc|ENSG00000153130|Q9UIL1-2|SCOC;nc|ENSG00000153130|Q9UIL1|SCOC	ENSG00000153130|ENST00000608372|SCOC	ENSG00000153130|ENST00000608372|SCOC	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	549.337498	1096.66044	0.6365	0.00034965	-0.0094083	-5.1683E-06	0.62709	0.00034449	549.3373713729818	55.696	0.21973	57.664	57.56	57.78	1.9684	-0.039255	-0.00061271	NaN	34.402	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2314500			28711	3346	14225	14283							0.1159798029407284
RLIPHPRRLW	10	Unmodified	_RLIPHPRRLW_					0	0	0		ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4091064333916	2	672.412198	1342.80984	1.0593	0.00071226	-2.6478	-0.0017804	-1.5885	-0.0010681	672.4106597584806	80.086	1.1126	81.803	80.735	81.848	1.7167					43	35	2	0	0	0	0.89646	1	33558	33558		1.8442	0	1	1886500			28712	5248	14226	14284	32911	32911					0.15214970427336993
RLIPHPRRLW	10	Unmodified	_RLIPHPRRLW_					0	0	0		ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.9109985232353	2	672.412198	1342.80984	0.84142	0.00056578	-4.4444	-0.0029885	-3.603	-0.0024227	672.9110014423139	80.232	0.23228	81.948	81.848	82.08	1.7167					14	7	2	0	0	0	0.89646	1	33660	33660		1.8442	0.19162	1	1955300			28713	5248	14226	14284	32912	32912					0.15214970427336993
RLIPHPRRLW	10	Unmodified	_RLIPHPRRLW_					0	0	0		ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	672.412198	1342.80984	2.0659	0.0013891	-4.661	-0.0031341	-2.5952	-0.001745	672.4089314371103	81.937	0.95213	82.217	81.875	82.827	0.2802	0.059991	-0.00012884	NaN	1.8442	51	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1088200			28714	5248	14226	14284							0.15214970427336993
RLIPHPRRLW	10	Unmodified	_RLIPHPRRLW_					0	0	0		ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	ENSG00000214819|ENST00000399044|CDRT15L2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	672.412198	1342.80984	2.8656	0.0019269	-4.5057	-0.0030297	-1.6401	-0.0011028	672.4095766143639	81.072	0.43375	82.306	82.161	82.595	1.2332	0.14856	7.9991E-05	NaN	1.8442	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	808240			28715	5248	14226	14284							0.15214970427336993
RLIPSVIKYY	10	Unmodified	_RLIPSVIKYY_					0	0	0			REV__ENSG00000237521|ENST00000456448|OR7E24	REV__ENSG00000237521|ENST00000456448|OR7E24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6924926638603	4	313.69195	1250.73869	0.084014	2.6354E-05	1.4441	0.000453	1.5281	0.00047936	313.6923345218594	28.733	0.81334	30.532	30.206	31.02	1.7987					89	26	5	0	0	0	0.8882	1	12125	12125		1.3296	0.70282	1	20859000	+		28716	11910	14227	14285	32913	32913					0.12335412879338037
RLIPTLVSI	9	Unmodified	_RLIPTLVSI_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3320495486259	2	506.331685	1010.64882	2.9817	0.0015097	-2.3129	-0.0011711	0.66874	0.0003386	506.3305031007285	63.295	0.28272	64.708	64.533	64.816	1.4134					21	8	3	0	0	0	0.20244	1	26528	26528		32.786	8.7651	1	1890200			28717	5069	14228	14286	32914	32914					0.14391783270752967
RLIPTLVSI	9	Unmodified	_RLIPTLVSI_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3318969607353	2	506.331685	1010.64882	2.6521	0.0013428	-0.99226	-0.00050241	1.6598	0.00084042	506.331259836389	62.695	0.37553	64.64	64.407	64.782	1.9444					19	11	3	0	0	0	0.1388	1	26293	26293		39.95	15.929	1	1591400			28718	5069	14228	14286	32915	32915					0.14391783270752967
RLIPTLVSI	9	Unmodified	_RLIPTLVSI_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	506.331685	1010.64882	2.0035	0.0010144	-2.2574	-0.001143	-0.25393	-0.00012857	506.3307338488478	65.199	0.1859	65.199	65.104	65.289	0	0.33342	-0.00075577	NaN	39.95	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475000			28719	5069	14228	14286							0.14391783270752967
RLIPTLVSI	9	Unmodified	_RLIPTLVSI_					0	0	0		ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	506.331685	1010.64882	2.2474	0.0011379	-1.1684	-0.00059159	1.079	0.00054635	506.33003536765733	64.587	0.18774	64.915	64.82	65.008	0.32809	0.049542	0.00034702	NaN	39.95	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	528880			28720	5069	14228	14286							0.14391783270752967
RLIQLVVSIVP	11	Unmodified	_RLIQLVVSIVP_					0	0	0			REV__nc|ENSG00000273540|Q96MI9|AGBL1	REV__nc|ENSG00000273540|Q96MI9|AGBL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	618.9045898318291	2	618.905548	1235.79654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.97	1	106.13	105.63	106.63	0.16394								0	0	0	0.63775	1	45204	45204		1.3295	0	1		+		28721	12012	14229	14287	32916	32916					0.18807674804747876
RLIRKLKRP	9	Unmodified	_RLIRKLKRP_					0	0	0			REV__nc|ENSG00000142185|O94759-2|TRPM2	REV__nc|ENSG00000142185|O94759-2|TRPM2	MSMS	GG20161007_CRH_Patient100_A02_01	1	590.4124633669853	2	590.411666	1178.80878	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.852	1	89.852	89.352	90.352	0								0	0	0	0.42693	1	37556	37556		0.6015	0	1		+		28722	10171	14230	14288	32917	32917					0.22652756058437262
RLIRTPAVRN	10	Unmodified	_RLIRTPAVRN_					0	0	0			REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|18|1|sense	REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|18|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.857	1	20.305	19.805	20.805	1.448								0	0	0	0.66222	1	7840	7840		0.69767	0	1		+		28723	14304	14231	14289	32918	32918					0.14134698402403956
RLIVAIQLVR	10	Unmodified	_RLIVAIQLVR_					0	0	0			REV__ENST00000479608.5_1_12:46230576-46239804:+|nuORF	REV__ENST00000479608.5_1_12:46230576-46239804:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2671996951103	3	394.267797	1179.78156	-0.34172	-0.00013473	-4.4659	-0.0017608	-4.8076	-0.0018955	394.26760816537035	31.885	0.69245	31.885	31.441	32.134	0					46	21	4	0	0	0	0.86348	2	13381	13381;13412		5.4027	2.0831	1	1842700	+		28724	8140	14232	14290	32919;32920	32919					0.19886227727420192
RLIVAIQLVR	10	Unmodified	_RLIVAIQLVR_					0	0	0			REV__ENST00000479608.5_1_12:46230576-46239804:+|nuORF	REV__ENST00000479608.5_1_12:46230576-46239804:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2676269412041	3	394.267797	1179.78156	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.921	1	31.204	30.704	31.704	1.2825								0	0	0	0.66161	1	12556	12556		1.7423	0.52744	1		+		28725	8140	14232	14290	32921	32921					0.19886227727420192
RLKCLRRYRQR	11	Unmodified	_RLKCLRRYRQR_					0	0	0		ENSG00000139620|ENST00000420613|KANSL2	ENSG00000139620|ENST00000420613|KANSL2	ENSG00000139620|ENST00000420613|KANSL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	387.7373840212822	4	387.734852	1546.9103	2.5447	0.00098666	1.8091	0.00070146	4.3538	0.0016881	387.7362262155135	85.55	1.5	85.803	84.781	86.281	0.25227					129	47	3	0	0	0	1.0402	1	35751	35751		0.094841	0.011491	1	1634500			28726	2882	14233	14291	32922	32922					0.15872259418688373
RLKCLRRYRQR	11	Unmodified	_RLKCLRRYRQR_					0	0	0		ENSG00000139620|ENST00000420613|KANSL2	ENSG00000139620|ENST00000420613|KANSL2	ENSG00000139620|ENST00000420613|KANSL2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	387.734852	1546.9103	0.68638	0.00026614	5.3017	0.0020556	5.988	0.0023218	387.98797777463557	85.73	0.12499	85.73	85.665	85.79	0	-0.036606	0.0045955	NaN	0.094841	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	150110			28727	2882	14233	14291							0.15872259418688373
RLKDRQQKLQL	11	Unmodified	_RLKDRQQKLQL_					0	0	0			REV__ENSG00000176108|ENST00000325167|CHMP6	REV__ENSG00000176108|ENST00000325167|CHMP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	713.4375488162041	2	713.436067	1424.85758	2.1241	0.0015154	0.3588	0.00025598	2.4829	0.0017714	713.4363280518709	53.212	1.1124	53.212	52.854	53.966	0					111	37	4	0	0	0	0.88359	1	22181	22181		10.8	2.0541	1	39689000	+		28728	11171	14234	14292	32923	32923					0.16214579836901066
RLKDRQQKLQL	11	Unmodified	_RLKDRQQKLQL_					0	0	0			REV__ENSG00000176108|ENST00000325167|CHMP6	REV__ENSG00000176108|ENST00000325167|CHMP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.9619628787041	3	475.959803	1424.85758	0.82785	0.00039402	2.8725	0.0013672	3.7003	0.0017612	475.96244168629164	51.308	2.4007	52.702	52.226	54.627	1.3938					231	78	6	0	0	0	0.98155	1	21417	21417		2.2527	0.92309	1	578340000	+		28729	11171	14234	14292	32924	32924					0.16214579836901066
RLKFYRKKWRQ	11	Unmodified	_RLKFYRKKWRQ_					0	0	0			REV__nc|ENSG00000102780|Q86XP1-2|DGKH	REV__nc|ENSG00000102780|Q86XP1-2|DGKH	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1803771853447	4	402.995397	1607.95248	0.18617	7.5027E-05	2.8415	0.0011451	3.0277	0.0012201	402.99647421516903	38.857	0.73916	38.857	38.62	39.359	0					41	26	3	0	0	0	0.14606	1	16338	16338		0	0	1	1626400	+		28730	9081	14235	14293	32925	32925					0.17282558098713707
RLKFYRKKWRQ	11	Unmodified	_RLKFYRKKWRQ_					0	0	0			REV__nc|ENSG00000102780|Q86XP1-2|DGKH	REV__nc|ENSG00000102780|Q86XP1-2|DGKH	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1798278689384	4	402.995397	1607.95248	1.6639	0.00067054	1.9878	0.00080109	3.6517	0.0014716	402.99610054917486	37.828	0.58073	38.133	37.766	38.346	0.30497					31	24	3	0	0	0	0.14606	1	15957	15957		0	0	1	1770600	+		28731	9081	14235	14293	32926	32926					0.17282558098713707
RLKFYRKKWRQ	11	Unmodified	_RLKFYRKKWRQ_					0	0	0			REV__nc|ENSG00000102780|Q86XP1-2|DGKH	REV__nc|ENSG00000102780|Q86XP1-2|DGKH	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	402.995397	1607.95248	1.6915	0.00068167	1.4337	0.00057777	3.1252	0.0012594	403.2462245138935	38.28	0.087959	38.588	38.537	38.625	0.30857	-0.1343	-0.0016806	NaN	0	10	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1079600	+		28732	9081	14235	14293							0.17282558098713707
RLKIQEHSIK	10	Unmodified	_RLKIQEHSIK_					0	0	0		nc|ENSG00000157343|Q5T9G4-3|ARMC12;ENSG00000157343|ENST00000373866|ARMC12;nc|ENSG00000157343|Q5T9G4-2|ARMC12	nc|ENSG00000157343|Q5T9G4-3|ARMC12	nc|ENSG00000157343|Q5T9G4-3|ARMC12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9230834841728	3	417.922578	1250.7459	2.9413	0.0012292	-0.33639	-0.00014059	2.6049	0.0010886	417.92220993239306	94.227	0.53398	94.372	94.133	94.667	0.14493					60	16	5	0	0	0	0.89803	1	39493	39493		0.15932	0	1	23177000			28733	3469	14236	14294	32927	32927					0.1305614547973164
RLKKLAET	8	Unmodified	_RLKKLAET_					0	0	0		nc|ENSG00000169756|P48059|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;ENSG00000169756|ENST00000544547|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059-3|LIMS1	nc|ENSG00000169756|P48059|LIMS1	nc|ENSG00000169756|P48059|LIMS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2067138552666	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.185	1	84.822	84.322	85.322	1.6379								0	0	0	1.0178	1	34893	34893		1.6526	0	1				28734	4109	14237	14295	32928	32928					0.1166203957682228
RLKKLAET	8	Unmodified	_RLKKLAET_					0	0	0		nc|ENSG00000169756|P48059|LIMS1;nc|ENSG00000169756|P48059-4|LIMS1;ENSG00000169756|ENST00000544547|LIMS1;nc|ENSG00000169756|P48059-5|LIMS1;nc|ENSG00000169756|P48059-3|LIMS1	nc|ENSG00000169756|P48059|LIMS1	nc|ENSG00000169756|P48059|LIMS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2067138552666	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.314	1	84.952	84.452	85.452	1.6379								0	0	0	1.0178	1	34946	34946		1.6526	0	1				28735	4109	14237	14295	32929	32929					0.1166203957682228
RLKKLKKLY	9	Unmodified	_RLKKLKKLY_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751953005791	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.95	1	111.95	111.45	112.45	0								0	0	0	0.42693	1	48414	48414		0.26902	0	1		+		28736	11114	14238	14296	32930	32930					0.22019702249849615
RLKKLKKLY	9	Unmodified	_RLKKLKKLY_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2760803103447	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.2	1	112.2	111.7	112.7	0								0	0	0	0.42693	1	48515	48515		0.26902	0	1		+		28737	11114	14238	14296	32931	32931					0.22019702249849615
RLKKLKKLY	9	Unmodified	_RLKKLKKLY_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2750121951103	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.33	1	112.33	111.83	112.83	0								0	0	0	0.42693	1	48568	48568		0.26902	0	1		+		28738	11114	14238	14296	32932	32932					0.22019702249849615
RLKKLKKLY	9	Unmodified	_RLKKLKKLY_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2754394412041	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.63	1	112.63	112.13	113.13	0								0	0	0	0.42693	1	48686	48686		0.26902	0	1		+		28739	11114	14238	14296	32933	32933					0.22019702249849615
RLKKLKKLY	9	Unmodified	_RLKKLKKLY_					0	0	0			REV__ENSG00000174106|ENST00000308330|LEMD3	REV__ENSG00000174106|ENST00000308330|LEMD3	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751342654228	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.25	1	115.25	114.75	115.75	0								0	0	0	0.42693	1	49740	49740		0.26902	0	1		+		28740	11114	14238	14296	32934	32934					0.22019702249849615
RLKLKVEQHV	10	Unmodified	_RLKLKVEQHV_					0	0	0		ENST00000597453.1_1_19:41848042-41854244:-|nuORF;ENSG00000105329|ENST00000221930|TGFB1	ENST00000597453.1_1_19:41848042-41854244:-|nuORF	ENST00000597453.1_1_19:41848042-41854244:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	625.3937255740166	2	625.390596	1248.76664	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.51	1	108.56	108.06	109.06	0.050644								0	0	0	0.6624	1	46655	46655		0.40072	0	1				28741	1510	14239	14297	32935	32935					0.15220735859406886
RLKRLFLA	8	Unmodified	_RLKRLFLA_					0	0	0		ENST00000263979.7_1_1:25944342-25980780:+|nuORF;ENSG00000117643|ENST00000374332|MAN1C1	ENST00000263979.7_1_1:25944342-25980780:+|nuORF	ENST00000263979.7_1_1:25944342-25980780:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.8412353396416	2	508.840011	1015.66547	1.4576	0.00074168	-0.5826	-0.00029645	0.87499	0.00044523	508.83966086715134	107.66	0.22359	107.66	107.55	107.77	0					40	11	5	0	0	0	0.89198	2	46174	46174;46236		0	0	1	415360000			28742	2019	14240	14298	32936;32937	32936					0.15826328947343882
RLKSRRSPVP	10	Unmodified	_RLKSRRSPVP_					0	0	0			REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2501403689384	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.156	1	15.925	15.425	16.425	0.76937								0	0	0	0.66222	1	6298	6298		0.69767	0.24315	1		+		28743	12994	14241	14299	32938	32938					0.14134698402403956
RLKSRRSPVP	10	Unmodified	_RLKSRRSPVP_					0	0	0			REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2497131228447	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.319	1	16.145	15.645	16.645	0.82643								0	0	0	0.66222	1	6366	6366		0.69767	0.24315	1		+		28744	12994	14241	14299	32939	32939					0.14134698402403956
RLKSRRSPVP	10	Unmodified	_RLKSRRSPVP_					0	0	0			REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	REV__ENST00000425494.1_1_10:37812205-37812634:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502319216728	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.087	1	15.984	15.484	16.484	0.89664								0	0	0	0.66222	1	6259	6259		0.69767	0.24315	1		+		28745	12994	14241	14299	32940	32940					0.14134698402403956
RLKVLAKHG	9	Unmodified	_RLKVLAKHG_					0	0	0			REV__nc|ENSG00000149782|Q01970-2|PLCB3	REV__nc|ENSG00000149782|Q01970-2|PLCB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.2231628298759	3	341.225821	1020.65563	-1.2744	-0.00043487	-2.095	-0.00071487	-3.3695	-0.0011497	341.22508552644695	46.942	1.0569	46.942	46.566	47.622	0					48	33	2	0	0	0	0.8462	1	19875	19875		1.0715	0	1	1654400	+		28746	10376	14242	14300	32941	32941					0.14613140941969505
RLKVLAKHG	9	Unmodified	_RLKVLAKHG_					0	0	0			REV__nc|ENSG00000149782|Q01970-2|PLCB3	REV__nc|ENSG00000149782|Q01970-2|PLCB3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	341.225821	1020.65563	-1.2744	-0.00043487	-2.095	-0.00071487	-3.3695	-0.0011497	341.22508552644695	46.942	1.0569	46.942	46.566	47.622	0	0	0	NaN	1.0715	48	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1654400	+		28747	10376	14242	14300							0.14613140941969505
RLKYEEEV	8	Unmodified	_RLKYEEEV_					0	0	0			REV__nc|ENSG00000167291|Q8TBP0-3|TBC1D16	REV__nc|ENSG00000167291|Q8TBP0-3|TBC1D16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0697204470634	3	355.857351	1064.55022	1.0468	0.00037252	-0.41657	-0.00014824	0.63025	0.00022428	355.8583939993768	70.56	0.46385	70.882	70.647	71.111	0.32224					40	14	4	0	0	0	2.3239	1	29467	29467		1.6526	0	1	1692400	+		28748	10860	14243	14301	32942	32942					0.02053135235018999
RLLAAADG	8	Unmodified	_RLLAAADG_					0	0	0		ENST00000511828.1_1_4:100575555-100575762:-|nuORF	ENST00000511828.1_1_4:100575555-100575762:-|nuORF	ENST00000511828.1_1_4:100575555-100575762:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	786.4462158083916	1	786.446828	785.439552	1.3023	0.0010242	-2.2289	-0.0017529	-0.92666	-0.00072877	786.4451661042343	103.44	0.058273	103.44	103.39	103.45	0					8	2	4	0	0	0	0.89008	1	43406	43406		2.5775	0	1	36617000			28749	7037	14244	14302	32943	32943					0.038249600374570036
RLLAEIGAVTL	11	Unmodified	_RLLAEIGAVTL_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34;ENST00000496583.1_1_19:54695101-54695536:+|nuORF	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.3608276247978	2	578.358431	1154.70231	1.7964	0.001039	0.8857	0.00051225	2.6821	0.0015512	578.3591151278105	64.237	0.16093	64.566	64.497	64.658	0.32899					8	4	2	0	0	0	0.91385	1	26913	26913		8.9762	0.82072	1	312270			28750	4166	14245	14303	32944	32944					0.1311453598261778
RLLAEIGAVTL	11	Unmodified	_RLLAEIGAVTL_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34;ENST00000496583.1_1_19:54695101-54695536:+|nuORF	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	578.358431	1154.70231	1.8057	0.0010444	-0.50385	-0.00029141	1.3019	0.00075295	578.3582933587588	64.801	0.19171	64.801	64.69	64.881	0	0.24127	-0.00074786	NaN	8.9762	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459970			28751	4166	14245	14303							0.1311453598261778
RLLAEIGAVTL	11	Unmodified	_RLLAEIGAVTL_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34;ENST00000496583.1_1_19:54695101-54695536:+|nuORF	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	578.358431	1154.70231	3.0409	0.0017587	-0.53938	-0.00031196	2.5015	0.0014468	578.3586011790006	62.355	0.27066	64.312	64.18	64.451	1.9571	-0.24773	-0.00078897	NaN	8.9762	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1415000			28752	4166	14245	14303							0.1311453598261778
RLLCRNRKVHF	11	Unmodified	_RLLCRNRKVHF_					0	0	0		ENST00000502740.1_1_8:15664207-15664498:-|nuORF	ENST00000502740.1_1_8:15664207-15664498:-|nuORF	ENST00000502740.1_1_8:15664207-15664498:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2832214236259	3	481.282223	1440.82484	2.8816	0.0013869	0.46397	0.0002233	3.3456	0.0016102	481.2819766076201	86.628	0.68407	86.628	86.132	86.816	0					32	23	2	0	0	0	1.0402	1	35929	35929		0.094841	0	1	1228200			28753	6981	14246	14304	32945	32945					0.12206094233033582
RLLCRNRKVHF	11	Unmodified	_RLLCRNRKVHF_					0	0	0		ENST00000502740.1_1_8:15664207-15664498:-|nuORF	ENST00000502740.1_1_8:15664207-15664498:-|nuORF	ENST00000502740.1_1_8:15664207-15664498:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	481.282223	1440.82484	3.377	0.0016253	-0.78366	-0.00037716	2.5933	0.0012481	481.2816339859035	86.339	0.59206	86.583	86.152	86.744	0.24387	-0.022347	-0.0012268	NaN	0.094841	29	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	590950			28754	6981	14246	14304							0.12206094233033582
RLLDGAFKL	9	Unmodified	_RLLDGAFKL_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;ENST00000491646.1_1_2:122217554-122217677:-|nuORF	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	344.8776428103447	3	344.878198	1031.61277	0.78992	0.00027243	-0.8535	-0.00029435	-0.06358	-2.1927E-05	344.87818599096687	46.081	0.2438	48.052	47.912	48.156	1.9703					17	7	3	0	0	0	0.35391	1	19325	19325		16.566	7.8205	1	920330			28755	908	14247	14305	32946	32946					0.09822326093899392
RLLDGAFKL	9	Unmodified	_RLLDGAFKL_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;ENST00000491646.1_1_2:122217554-122217677:-|nuORF	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	344.878198	1031.61277	0.55582	0.00019169	0.53955	0.00018608	1.0954	0.00037777	344.87879188767175	46.503	0.21819	47.878	47.832	48.051	1.3751	-0.08709	0.00057266	NaN	16.566	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	401990			28756	908	14247	14305							0.09822326093899392
RLLDISISAV	10	Unmodified	_RLLDISISAV_					0	0	0		nc|ENSG00000049618|Q8NFD5-1|ARID1B;nc|ENSG00000049618|Q8NFD5|ARID1B;nc|ENSG00000049618|Q8NFD5-2|ARID1B;ENSG00000049618|ENST00000636930|ARID1B	nc|ENSG00000049618|Q8NFD5-1|ARID1B	nc|ENSG00000049618|Q8NFD5-1|ARID1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8326904177666	2	543.829506	1085.64446	3.1291	0.0017017	1.8079	0.00098317	4.9369	0.0026848	543.8297998716473	60.941	0.19166	62.36	62.249	62.441	1.4196					9	5	2	0	0	0	0.31135	1	25542	25542		38.615	5.8291	1	836300			28757	692	14248	14306	32947	32947					0.10506274057183873
RLLDLDIPMSV	11	Unmodified	_RLLDLDIPMSV_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;UBP1-TFCP2L1|1|fusion	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	636.3531982302666	2	636.355031	1270.69551	2.126	0.0013529	-2.3196	-0.0014761	-0.19366	-0.00012324	636.3531604435103	76.381	0.45882	76.381	76.164	76.623	0					19	14	2	0	0	0	0.31887	1	31812	31812		30.703	0	1	601270			28758	3360	14249	14307	32948	32948					0.07098855039703267
RLLDLDIPMSV	11	Unmodified	_RLLDLDIPMSV_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;UBP1-TFCP2L1|1|fusion	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	636.3550292849541	2	636.355031	1270.69551	2.2692	0.001444	-1.6664	-0.0010604	0.60279	0.00038359	636.3540201795391	75.801	0.43903	76.123	75.925	76.364	0.32164					32	13	3	0	0	0	0.25639	2	31726	31677;31726		35.612	0	1	1097400			28759	3360	14249	14307	32949;32950	32950					0.07098855039703267
RLLDLDIPMSV	11	Unmodified	_RLLDLDIPMSV_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;UBP1-TFCP2L1|1|fusion	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.3568603396416	2	636.355031	1270.69551	2.7699	0.0017627	-0.372	-0.00023673	2.3979	0.0015259	636.3546518258207	74.764	0.7378	76.07	75.847	76.585	1.3063					64	23	4	0	0	0	0.022207	2	31349	31349;31400		97.741	0	1	6434300			28760	3360	14249	14307	32951;32952	32951					0.07098855039703267
RLLDLDIPMSV	11	Unmodified	_RLLDLDIPMSV_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;UBP1-TFCP2L1|1|fusion	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3559448122978	2	636.355031	1270.69551	2.5177	0.0016021	-1.2007	-0.00076409	1.317	0.00083805	636.3544909070583	74.332	0.69373	76.128	75.929	76.622	1.7962					50	21	4	0	0	0	0.0013356	3	31202	31153;31202;31257		121.5	0	1	5851100			28761	3360	14249	14307	32953;32954;32955	32954					0.07098855039703267
RLLDLENIQI	10	Unmodified	_RLLDLENIQI_					0	0	0		nc|ENSG00000062598|Q96JJ3-3|ELMO2;ENSG00000062598|ENST00000290246|ELMO2;ENST00000487843.1_1_7:36895158-37025590:-|nuORF;nc|ENSG00000155849|Q92556-2|ELMO1;nc|ENSG00000155849|Q92556-3|ELMO1;ENSG00000155849|ENST00000310758|ELMO1	nc|ENSG00000062598|Q96JJ3-3|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.8572875857353	2	613.858795	1225.70304	1.9256	0.001182	-1.8409	-0.0011301	0.084649	5.1963E-05	613.8568726104859	70.533	0.38609	70.533	70.394	70.78	0					26	12	3	0	0	0	0.44353	2	29368	29368;29420		30.703	0.86286	1	1871300			28762	757	14250	14308	32956;32957	32956					0.09921330631664205
RLLDLENIQI	10	Unmodified	_RLLDLENIQI_					0	0	0		nc|ENSG00000062598|Q96JJ3-3|ELMO2;ENSG00000062598|ENST00000290246|ELMO2;ENST00000487843.1_1_7:36895158-37025590:-|nuORF;nc|ENSG00000155849|Q92556-2|ELMO1;nc|ENSG00000155849|Q92556-3|ELMO1;ENSG00000155849|ENST00000310758|ELMO1	nc|ENSG00000062598|Q96JJ3-3|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.8598510622978	2	613.858795	1225.70304	1.1546	0.00070879	0.90587	0.00055608	2.0605	0.0012649	613.8594143106982	70.009	0.3425	70.331	70.16	70.503	0.32224					26	10	3	0	0	0	0.44353	1	29337	29337		30.703	5.7125	1	2207200			28763	757	14250	14308	32958	32958					0.09921330631664205
RLLDLENIQI	10	Unmodified	_RLLDLENIQI_					0	0	0		nc|ENSG00000062598|Q96JJ3-3|ELMO2;ENSG00000062598|ENST00000290246|ELMO2;ENST00000487843.1_1_7:36895158-37025590:-|nuORF;nc|ENSG00000155849|Q92556-2|ELMO1;nc|ENSG00000155849|Q92556-3|ELMO1;ENSG00000155849|ENST00000310758|ELMO1	nc|ENSG00000062598|Q96JJ3-3|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.8601562380791	2	613.858795	1225.70304	1.854	0.0011381	0.2984	0.00018317	2.1524	0.0013213	613.859153660976	68.967	0.43948	70.333	70.091	70.53	1.3657					36	13	4	0	0	0	0.045734	2	28914	28914;28954		90.135	10.539	1	8163500			28764	757	14250	14308	32959;32960	32959					0.09921330631664205
RLLDLENIQI	10	Unmodified	_RLLDLENIQI_					0	0	0		nc|ENSG00000062598|Q96JJ3-3|ELMO2;ENSG00000062598|ENST00000290246|ELMO2;ENST00000487843.1_1_7:36895158-37025590:-|nuORF;nc|ENSG00000155849|Q92556-2|ELMO1;nc|ENSG00000155849|Q92556-3|ELMO1;ENSG00000155849|ENST00000310758|ELMO1	nc|ENSG00000062598|Q96JJ3-3|ELMO2	nc|ENSG00000062598|Q96JJ3-3|ELMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.8598510622978	2	613.858795	1225.70304	1.8947	0.0011631	-0.52276	-0.0003209	1.3719	0.00084217	613.8588286198197	68.375	0.47206	70.245	70.042	70.514	1.87					42	14	4	0	0	0	0.067026	2	28716	28716;28765		71.708	1.3759	1	6599700			28765	757	14250	14308	32961;32962	32961					0.09921330631664205
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.3243896365166	2	505.32386	1008.63317	1.7658	0.00089229	-0.291	-0.00014705	1.4748	0.00074524	505.32405081499314	71.21	2.1849	71.21	70.811	72.996	0					171	68	5	0	0	0	0.049839	7	29580	29580;29619;29658;29736;29936;29994;30056		68.081	15.812	1	185410000			28766	4631	14251	14309	32963;32964;32965;32966;32967;32968;32969	32963					0.12919496753693238
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.3248474001884	2	505.32386	1008.63317	1.722	0.00087018	0.029607	1.4961E-05	1.7516	0.00088514	505.32429388891376	70.554	1.8866	70.876	70.53	72.417	0.32224					166	59	5	0	0	0	0.029093	8	29510	29416;29460;29510;29549;29588;29627;29666;29828		88.904	17.77	1	226420000			28767	4631	14251	14309	32970;32971;32972;32973;32974;32975;32976;32977	32972					0.12919496753693238
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1009.638964831829	1	1009.64044	1008.63317	1.6218	0.0016374	-3.2437	-0.0032749	-1.6219	-0.0016376	1009.6354955051629	70.552	0.37066	70.874	70.708	71.079	0.32224					22	11	3	0	0	0	0.32838	1	29521	29521		24.021	4.7636	1	1149300			28768	4631	14251	14309	32978	32978					0.12919496753693238
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3251525759697	2	505.32386	1008.63317	2.353	0.001189	-1.3427	-0.0006785	1.0103	0.00051052	505.32407176962755	69.378	2.2451	70.743	70.35	72.595	1.3657					189	72	6	0	0	0	0.049839	8	29006	29006;29055;29159;29198;29315;29355;29402;29452		68.081	15.812	1	850920000			28769	4631	14251	14309	32979;32980;32981;32982;32983;32984;32985;32986	32979					0.12919496753693238
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1009.637927234173	1	1009.64044	1008.63317	1.9827	0.0020018	-2.5628	-0.0025875	-0.58011	-0.0005857	1009.6375491753255	69.378	0.37804	70.743	70.53	70.908	1.3657					22	12	2	0	0	0	0.070055	1	29079	29079		60.074	17.979	1	3901300			28770	4631	14251	14309	32987	32987					0.12919496753693238
RLLDVLAPL	9	Unmodified	_RLLDVLAPL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3248168826103	2	505.32386	1008.63317	1.3884	0.0007016	-0.20979	-0.00010601	1.1786	0.00059558	505.3246927802658	68.807	2.3248	70.66	70.281	72.606	1.853					225	74	6	0	0	0	0.049839	8	28758	28758;28806;28884;28936;28975;29014;29096;29203		68.081	15.812	1	643420000			28771	4631	14251	14309	32988;32989;32990;32991;32992;32993;32994;32995	32988					0.12919496753693238
RLLDVLAPLV	10	Unmodified	_RLLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.8580200076103	2	554.858067	1107.70158	1.6529	0.00091711	-0.32602	-0.00018089	1.3269	0.00073621	554.8575941064594	82.352	0.547	82.352	82.099	82.646	0					37	17	3	0	0	0	0.58279	3	34255	34255;34302;34351		23.79	3.3362	1	2983900			28772	4631	14252	14310	32996;32997;32998	32996					0.15203741333539256
RLLDVLAPLV	10	Unmodified	_RLLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	554.8586913943291	2	554.858067	1107.70158	2.0666	0.0011467	-0.86141	-0.00047796	1.2052	0.00066869	554.8573313952132	81.797	0.49147	82.077	81.844	82.335	0.2802					39	15	3	0	0	0	0.58279	3	34156	34156;34207;34260		23.79	3.5348	1	3735200			28773	4631	14252	14310	32999;33000;33001	32999					0.15203741333539256
RLLDVLAPLV	10	Unmodified	_RLLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8596069216728	2	554.858067	1107.70158	2.7567	0.0015296	-0.01233	-6.8415E-06	2.7443	0.0015227	554.8579062342648	80.765	0.63734	81.998	81.771	82.408	1.2332					58	20	4	0	0	0	0.1353	3	33921	33871;33921;33973		57.722	17.772	1	8509700			28774	4631	14252	14310	33002;33003;33004	33003					0.15203741333539256
RLLDVLAPLV	10	Unmodified	_RLLDVLAPLV_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8580810427666	2	554.858067	1107.70158	1.3042	0.00072363	-0.60719	-0.00033691	0.69698	0.00038672	554.8576930406048	80.38	0.62663	82.097	81.789	82.415	1.7167					49	20	3	0	0	0	0.24244	3	33701	33652;33701;33751		43.772	9.67	1	6811800			28775	4631	14252	14310	33005;33006;33007	33006					0.15203741333539256
RLLDVLAPLVL	11	Unmodified	_RLLDVLAPLVL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.4014160037041	2	611.400099	1220.78564	2.316	0.001416	-1.1302	-0.000691	1.1858	0.00072502	611.3994281630896	92.728	0.66685	92.728	92.502	93.169	0					59	21	4	0	0	0	0.075974	4	38733	38733;38785;38837;38907		61.09	34.822	1	9805200			28776	4631	14253	14311	33008;33009;33010;33011	33008					0.1840827243045169
RLLDVLAPLVL	11	Unmodified	_RLLDVLAPLVL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.4017211794853	2	611.400099	1220.78564	2.556	0.0015627	-0.35893	-0.00021945	2.1971	0.0013433	611.3999148766607	92.226	0.62231	92.416	92.175	92.797	0.19042					50	19	3	0	0	0	0.031929	2	38607	38560;38607		78.06	53.07	1	7816500			28777	4631	14253	14311	33012;33013	33013					0.1840827243045169
RLLDVLAPLVL	11	Unmodified	_RLLDVLAPLVL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.4029418826103	2	611.400099	1220.78564	4.0341	0.0024664	0.40412	0.00024708	4.4382	0.0027135	611.4004226876957	91.339	0.68103	92.32	92.071	92.752	0.98156					59	21	4	0	0	0	0.023369	4	38454	38406;38454;38491;38530		96.936	67.095	1	17624000			28778	4631	14253	14311	33014;33015;33016;33017	33015					0.1840827243045169
RLLDVLAPLVL	11	Unmodified	_RLLDVLAPLVL_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.4031860232353	2	611.400099	1220.78564	3.5951	0.0021981	0.95086	0.00058136	4.546	0.0027794	611.4006543024851	90.894	0.60342	92.26	91.994	92.598	1.366					57	18	4	0	0	0	0.00286	4	38255	38211;38255;38294;38333		117.76	81.254	1	16127000			28779	4631	14253	14311	33018;33019;33020;33021	33019					0.1840827243045169
RLLDYVVNI	9	Unmodified	_RLLDYVVNI_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8251830935478	2	552.824224	1103.63389	1.4111	0.00078008	0.43382	0.00023983	1.8449	0.0010199	552.82444080855	65.196	0.60197	65.196	64.977	65.579	0					49	18	4	0	0	0	0.040497	2	27169	27169;27223		75.761	18.289	1	9442900			28780	4991	14254	14312	33022;33023	33022					0.08622291402753035
RLLDYVVNI	9	Unmodified	_RLLDYVVNI_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8252441287041	2	552.824224	1103.63389	1.8769	0.0010376	0.16429	9.0824E-05	2.0412	0.0011284	552.8243354525428	64.7	0.47118	65.027	64.819	65.29	0.32689					45	14	4	0	0	0	0.053939	3	27100	27050;27100;27141		66.457	9.597	1	11635000			28781	4991	14254	14312	33024;33025;33026	33025					0.08622291402753035
RLLDYVVNI	9	Unmodified	_RLLDYVVNI_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8252441287041	2	552.824224	1103.63389	2.2106	0.0012221	-0.3889	-0.00021499	1.8217	0.0010071	552.8240901946891	63.536	0.65214	64.949	64.659	65.311	1.4134					63	20	5	0	0	0	0.040497	2	26624	26624;26676		75.761	8.417	1	46705000			28782	4991	14254	14312	33027;33028	33027					0.08622291402753035
RLLDYVVNI	9	Unmodified	_RLLDYVVNI_					0	0	0		nc|ENSG00000197256|Q63ZY3-3|KANK2;ENSG00000197256|ENST00000586659|KANK2;nc|ENSG00000197256|Q63ZY3-2|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	nc|ENSG00000197256|Q63ZY3-3|KANK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8253661990166	2	552.824224	1103.63389	2.2287	0.0012321	-0.49736	-0.00027495	1.7313	0.00095711	552.8240190254432	62.915	0.65167	64.86	64.628	65.279	1.9444					65	20	5	0	0	0	0.053939	1	26469	26469		66.457	8.9853	1	40610000			28783	4991	14254	14312	33029	33029					0.08622291402753035
RLLEATSYL	9	Unmodified	_RLLEATSYL_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3033935427666	2	533.300581	1064.58661	2.7227	0.001452	1.3896	0.00074106	4.1122	0.0021931	533.301310510734	44.733	0.40641	46.098	45.867	46.274	1.3653					29	12	3	0	0	0	0.15456	1	18766	18766		38.176	9.094	1	3621300			28784	471	14255	14313	33030	33030					0.05690012131753974
RLLEATSYL	9	Unmodified	_RLLEATSYL_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3032714724541	2	533.300581	1064.58661	2.5115	0.0013394	1.9305	0.0010296	4.4421	0.002369	533.301615602691	44.14	0.34559	46.084	45.862	46.208	1.9438					29	10	3	0	0	0	0.15456	1	18508	18508		38.176	7.9508	1	2353500			28785	471	14255	14313	33031	33031					0.05690012131753974
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	660.8262817263603	2	660.825149	1319.63574	2.2153	0.0014639	-0.40655	-0.00026866	1.8087	0.0011953	660.8248337620738	52.627	0.46933	52.627	52.447	52.916	0					27	14	3	0	0	0	0.17217	1	21943	21943		42.835	15.206	1	1188400			28786	1724	14256	14314	33032	33032					-0.011287443699529831
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	660.8258544802666	2	660.825149	1319.63574	1.6314	0.0010781	0.44567	0.00029451	2.0771	0.0013726	660.8260284760038	52.088	0.40351	52.414	52.248	52.652	0.32553					27	12	3	0	0	0	0.13365	2	21804	21804;21856		49.742	15.785	1	2047300			28787	1724	14256	14314	33033;33034	33033					-0.011287443699529831
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8218261599541	2	660.825149	1319.63574	0.68188	0.0004506	0.40777	0.00026946	1.0896	0.00072006	660.8255790191389	51.042	0.45298	52.435	52.197	52.65	1.3938					39	14	4	0	0	0	0.030532	2	21315	21315;21369		79.427	46.489	1	6216200			28788	1724	14256	14314	33035;33036	33035					-0.011287443699529831
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8265869021416	2	660.825149	1319.63574	0.51026	0.0003372	2.2352	0.0014771	2.7455	0.0018143	660.8265427999651	53.122	0.16012	54.522	54.473	54.633	1.4005					7	4	2	0	0	0	0.24642	1	22244	22244		36.395	18.022	1	552110			28789	1724	14256	14314	33037	33037					-0.011287443699529831
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	660.8249999880791	2	660.825149	1319.63574	0.8264	0.00054611	-0.79533	-0.00052557	0.031078	2.0537E-05	660.8250667433041	50.459	0.44763	52.434	52.219	52.667	1.9753					33	14	4	0	0	0	0.0028287	2	21149	21100;21149		117.84	51.381	1	8200200			28790	1724	14256	14314	33038;33039	33039					-0.011287443699529831
RLLEDGEDFNL	11	Unmodified	_RLLEDGEDFNL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000446618.1_1_22:19245879-19246326:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MSMS	GG20161007_CRH_Patient100_W632_02	4	660.8254882693291	2	660.825149	1319.63574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.651	1	54.623	54.123	55.123	1.9722								0	0	0	0.37961	1	22057	22057		31.636	14.523	1				28791	1724	14256	14314	33040	33040					-0.011287443699529831
RLLELHVF	8	Unmodified	_RLLELHVF_					0	0	0		ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	ENSG00000103335|ENST00000301015|PIEZO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.2080566287041	3	342.874677	1025.6022	0.26567	9.1093E-05	1.386	0.00047523	1.6517	0.00056633	342.8751032731716	37.283	0.88243	39.103	38.727	39.61	1.8202					97	34	4	0	0	0	2.3239	1	15495	15495		1.6526	0	1	11134000			28792	1428	14257	14315	33041	33041					0.09042343439477918
RLLEVPVML	9	Oxidation (M)	_RLLEVPVM(Oxidation (M))L_		RLLEVPVM(1)L		RLLEVPVM(63)L	0	0	1		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3241454958916	2	543.323002	1084.63145	1.8535	0.001007	1.0099	0.0005487	2.8634	0.0015557	543.3232948370405	63.039	0.75412	63.039	62.801	63.556	0					66	23	5	0	0	0	0.063746	2	26269	26269;26310		62.573	33.491	1	8087600			28793	762	14258	14316	33042;33043	33042		10			0.09252119673442394
RLLEVPVML	9	Oxidation (M)	_RLLEVPVM(Oxidation (M))L_		RLLEVPVM(1)L		RLLEVPVM(63)L	0	0	1		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3249389529228	2	543.323002	1084.63145	1.8955	0.0010299	1.5716	0.00085386	3.467	0.0018837	543.323802229449	62.489	0.58694	62.818	62.574	63.161	0.32974					54	18	4	0	0	0	0.063746	2	26152	26152;26204		62.573	39.836	1	6907300			28794	762	14258	14316	33044;33045	33044		10			0.09252119673442394
RLLEVPVML	9	Oxidation (M)	_RLLEVPVM(Oxidation (M))L_		RLLEVPVM(1)L		RLLEVPVM(82)L	0	0	1		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3250610232353	2	543.323002	1084.63145	3.0256	0.0016439	0.85004	0.00046184	3.8757	0.0021057	543.323195906368	61.191	0.79943	62.611	62.409	63.208	1.4196					76	25	5	0	0	0	0.033504	2	25664	25664;25717		81.89	49.585	1	20474000			28795	762	14258	14316	33046;33047	33046		10			0.09252119673442394
RLLEVPVML	9	Oxidation (M)	_RLLEVPVM(Oxidation (M))L_		RLLEVPVM(1)L		RLLEVPVM(63)L	0	0	1		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3250610232353	2	543.323002	1084.63145	3.2332	0.0017567	0.43822	0.00023809	3.6714	0.0019948	543.3229240360944	60.667	0.74384	62.632	62.26	63.004	1.9653					60	23	4	0	0	0	0.063746	2	25454	25454;25505		62.573	31.097	1	13441000			28796	762	14258	14316	33048;33049	33048		10			0.09252119673442394
RLLEVPVML	9	Unmodified	_RLLEVPVML_					0	0	0		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.3264648318291	2	535.325545	1068.63654	1.5778	0.00084464	-0.73676	-0.00039441	0.84104	0.00045023	535.3254037565895	71.129	0.53975	71.129	70.875	71.415	0					48	16	4	0	0	0	0.063746	3	29620	29582;29620;29659		62.573	35.689	1	10156000			28797	762	14258	14317	33050;33051;33052	33051					0.10496423536051225
RLLEVPVML	9	Unmodified	_RLLEVPVML_					0	0	0		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.3264648318291	2	535.325545	1068.63654	1.3777	0.00073752	-0.78343	-0.00041939	0.59428	0.00031813	535.3253950453179	70.4	0.48697	70.723	70.53	71.017	0.32224					48	15	4	0	0	0	0.086433	3	29484	29438;29484;29525		53.833	33.379	1	14424000			28798	762	14258	14317	33053;33054;33055	33054					0.10496423536051225
RLLEVPVML	9	Unmodified	_RLLEVPVML_					0	0	0		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.3265258669853	2	535.325545	1068.63654	2.0787	0.0011128	-1.1412	-0.00061093	0.93752	0.00050188	535.3251872230793	69.234	0.77903	70.599	70.317	71.096	1.3657					68	25	5	0	0	0	0.15456	3	29042	28993;29042;29082		38.176	23.337	1	73651000			28799	762	14258	14317	33056;33057;33058	33057					0.10496423536051225
RLLEVPVML	9	Unmodified	_RLLEVPVML_					0	0	0		ENST00000591718.1_1_19:55966993-55972941:-|nuORF;ENSG00000063241|ENST00000425675|ISOC2;nc|ENSG00000063241|Q96AB3-2|ISOC2	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	ENST00000591718.1_1_19:55966993-55972941:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.3270141482353	2	535.325545	1068.63654	1.8478	0.00098916	-1.0459	-0.00055989	0.80188	0.00042926	535.3252886666344	68.619	0.51987	70.472	70.217	70.737	1.853					59	16	5	0	0	0	0.1109	3	28731	28731;28781;28833		45.7	18.816	1	63460000			28800	762	14258	14317	33059;33060;33061	33059					0.10496423536051225
RLLFQRVL	8	Unmodified	_RLLFQRVL_					0	0	0		ENST00000409177.5_1_2:105984159-105990083:-|nuORF;ENST00000521844.1_1_8:8861643-8861781:+|nuORF	ENST00000409177.5_1_2:105984159-105990083:-|nuORF	ENST00000409177.5_1_2:105984159-105990083:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1044.668749988079	1	1044.66766	1043.66038	2.936	0.0030672	-2.0245	-0.002115	0.91149	0.00095221	1044.665248135691	108.92	0.22601	109.08	108.93	109.15	0.15898					22	10	3	0	0	0	0.89008	1	47183	47183		2.5775	1.7838	1	37238000			28801	6377	14259	14318	33062	33062					0.14030025084753106
RLLHEMILV	9	Unmodified	_RLLHEMILV_					0	0	0		ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	ENSG00000129083|ENST00000439561|COPB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3397704958916	2	562.336444	1122.65834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.452	1	44.805	44.305	45.305	1.3536								0	0	0	0.35665	1	18217	18217		13.042	3.6593	1				28802	2392	14260	14319	33063	33063					0.10191228284611498
RLLHPLVV	8	Unmodified	_RLLHPLVV_					0	0	0			REV__ENST00000534988.1_1_11:63996737-63997202:-|nuORF	REV__ENST00000534988.1_1_11:63996737-63997202:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2119018435478	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.13	1	86.383	85.883	86.883	0.25227								0	0	0	1.0178	1	36018	36018		0.45834	0	1		+		28803	13739	14261	14320	33064	33064					0.1373895116469157
RLLHRRQKRII	11	Unmodified	_RLLHRRQKRII_					0	0	0		PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant;ENSG00000164099|ENST00000296498|PRSS12	PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant	PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1489.978808581829	1	1488.97099	1487.96372	2.7359	0.0040737	0.78956	0.0011756	3.5255	0.0052494	1489.9762742945031	106.93	0.11287	107.08	107.03	107.14	0.15781					8	4	2	0	0	0	1.0405	1	45890	45890		0	0	1	54817000			28804	3749	14262	14321	33065	33065					0.2392538019287258
RLLHRRQKRII	11	Unmodified	_RLLHRRQKRII_					0	0	0		PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant;ENSG00000164099|ENST00000296498|PRSS12	PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant	PRSS12|p.L753Sfs*15|1|0.04|ENSG00000164099|chr4:118282894-118282894|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1488.979785144329	1	1488.97099	1487.96372	2.1028	0.0031311	1.2836	0.0019112	3.3864	0.0050423	1488.9724299147792	106.93	0.11021	107.1	107.02	107.13	0.16174					8	4	2	0	0	0	1.0405	1	45819	45819		0	0	1	37762000			28805	3749	14262	14321	33066	33066					0.2392538019287258
RLLHRTLKR	9	Unmodified	_RLLHRTLKR_					0	0	0		ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8934814333916	2	596.891098	1191.76764	3.2999	0.0019697	-1.4589	-0.00087079	1.841	0.0010989	596.8904080578246	105.94	0.1581	106.1	106.01	106.17	0.16679					28	7	5	0	0	0	0.83213	1	45150	45150		2.0598	0	1	618420000			28806	6770	14263	14322	33067	33067					0.17942995018961483
RLLHRTLKR	9	Unmodified	_RLLHRTLKR_					0	0	0		ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	596.891098	1191.76764	1.5735	0.00093919	0.90918	0.00054268	2.4826	0.0014819	596.8920065964965	106.02	0.14156	106.02	105.93	106.07	0	-0.04988	0.0016941	NaN	2.0598	18	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120230000			28807	6770	14263	14322							0.17942995018961483
RLLHRTLKR	9	Unmodified	_RLLHRTLKR_					0	0	0		ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	596.891098	1191.76764	2.6441	0.0015782	0.4174	0.00024915	3.0615	0.0018274	596.8915711003635	105.97	0.14495	106.03	105.96	106.1	0.05455	-0.039672	0.001107	NaN	2.0598	21	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	164090000			28808	6770	14263	14322							0.17942995018961483
RLLHRTLKR	9	Unmodified	_RLLHRTLKR_					0	0	0		ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	596.891098	1191.76764	3.1997	0.0019099	-0.65998	-0.00039394	2.5398	0.001516	596.8907943390383	105.96	0.17896	106.12	106.02	106.2	0.1586	0.050001	-0.00017917	NaN	2.0598	31	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557360000			28809	6770	14263	14322							0.17942995018961483
RLLHRTLKR	9	Unmodified	_RLLHRTLKR_					0	0	0		ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	ENST00000474330.1_1_7:105518710-105520137:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	596.891098	1191.76764	3.2999	0.0019697	-1.4589	-0.00087079	1.841	0.0010989	596.8904080578246	105.94	0.1581	106.1	106.01	106.17	0.16679	0.039551	-0.0011329	NaN	2.0598	28	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618420000			28810	6770	14263	14322							0.17942995018961483
RLLIHFRRIP	10	Unmodified	_RLLIHFRRIP_					0	0	0			REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	330.4711486697197	4	330.964837	1319.83024	0.16593	5.4916E-05	3.6756	0.0012165	3.8415	0.0012714	330.9653857208643	27.853	0.40424	29.629	29.354	29.759	1.7754					28	12	3	0	0	0	0.1256	1	11688	11688		0.62683	0.21856	1	691660	+		28811	12466	14264	14323	33068	33068					0.18312141087153577
RLLIHFRRIP	10	Unmodified	_RLLIHFRRIP_					0	0	0			REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	330.964837	1319.83024	0.51757	0.0001713	1.7003	0.00056275	2.2179	0.00073405	331.21589236268875	29.707	0.36621	29.993	29.749	30.115	0.2859	0.19738	-0.0028865	NaN	0.62683	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	612910	+		28812	12466	14264	14323							0.18312141087153577
RLLIHFRRIP	10	Unmodified	_RLLIHFRRIP_					0	0	0			REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	REV__ENST00000335661.6_1_15:80263082-80263130:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	330.964837	1319.83024	-0.25748	-8.5218E-05	5.8831	0.0019471	5.6256	0.0018619	330.96686202932057	28.487	0.4285	29.766	29.515	29.944	1.2789	-0.030275	0.0026509	NaN	0.62683	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	337630	+		28813	12466	14264	14323							0.18312141087153577
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4278442263603	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.82	1	106.98	106.48	107.48	0.16174								0	0	0	0.42693	1	45766	45766		0	0	1		+		28814	12841	14265	14324	33069	33069					0.2504532909251793
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4297363162041	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.51	1	107.67	107.17	108.17	0.15795								0	0	0	0.42693	1	46209	46209		0	0	1		+		28815	12841	14265	14324	33070	33070					0.2504532909251793
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4287597537041	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.66	1	107.82	107.32	108.32	0.15795								0	0	0	0.42693	1	46313	46313		0	0	1		+		28816	12841	14265	14324	33071	33071					0.2504532909251793
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4276000857353	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.86	1	108.01	107.51	108.51	0.15795								0	0	0	0.42693	1	46451	46451		0	0	1		+		28817	12841	14265	14324	33072	33072					0.2504532909251793
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4293701052666	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.95	1	108.11	107.61	108.61	0.15795								0	0	0	0.42693	1	46515	46515		0	0	1		+		28818	12841	14265	14324	33073	33073					0.2504532909251793
RLLILKKRR	9	Unmodified	_RLLILKKRR_					0	0	0			REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	REV__ENST00000395954.3_1_20:52773958-52774087:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.4313232302666	2	598.427316	1194.84008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.04	1	108.2	107.7	108.7	0.15795								0	0	0	0.42693	1	46567	46567		0	0	1		+		28819	12841	14265	14324	33074	33074					0.2504532909251793
RLLIRVLVPS	10	Unmodified	_RLLIRVLVPS_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3940917849541	2	583.392608	1164.77066	2.6404	0.0015404	-0.55297	-0.0003226	2.0874	0.0012178	583.3921933462117	107.5	0.24063	107.55	107.42	107.66	0.052452					46	11	5	0	0	0	0.89803	1	45960	45960		1.6526	1.1279	1	264770000	+		28820	12017	14266	14325	33075	33075					0.19486825353124004
RLLIRVLVPS	10	Unmodified	_RLLIRVLVPS_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3931152224541	2	583.392608	1164.77066	3.0994	0.0018082	-2.8315	-0.0016519	0.26793	0.00015631	583.3910109911412	105.98	0.15637	106.14	106.06	106.21	0.15859					26	7	4	0	0	0	0.89803	1	45253	45253		1.6526	0	1	421670000	+		28821	12017	14266	14325	33076	33076					0.19486825353124004
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.7880432009697	2	420.786913	839.559273	0.28713	0.00012082	-2.9466	-0.0012399	-2.6595	-0.0011191	420.78747739027926	107.87	0.28885	107.87	107.72	108.01	0					48	15	5	0	0	0	0.89198	2	46307	46307;46383		0	0	1	1850299999.9999998	+		28822	11551	14267	14326	33077;33078	33077					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	840.5672485232353	1	840.566549	839.559273	1.2237	0.0010286	-0.059706	-5.0187E-05	1.164	0.00097842	840.5664080050506	107.87	0.51904	107.87	107.47	107.99	0					67	27	5	0	0	0	0.89198	1	46366	46366		0	0	1	3033099999.9999995	+		28823	11551	14267	14326	33079	33079					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	840.5694457888603	1	840.566549	839.559273	2.7789	0.0023359	-1.5013	-0.0012619	1.2776	0.0010739	840.5651961644949	107.85	0.31073	107.9	107.69	108.01	0.052452					60	16	5	0	0	0	0.89198	2	46174	46174;46242		0	0	1	2988499999.9999995	+		28824	11551	14267	14326	33080;33081	33080					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5651122927666	1	840.566549	839.559273	2.9134	0.0024489	-0.96151	-0.00080821	1.9519	0.0016407	840.565626979389	108.35	0.63822	108.51	108.33	108.97	0.15781					89	33	4	0	0	0	0.89198	4	46707	46707;46851;46921;47067		0	0	1	170350000	+		28825	11551	14267	14326	33082;33083;33084;33085	33082					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5666381716728	1	840.566549	839.559273	3.0322	0.0025488	-2.5443	-0.0021387	0.48789	0.0004101	840.5642696303833	107.77	0.27406	107.93	107.77	108.05	0.15796					52	14	5	0	0	0	0.89198	1	46393	46393		0	0	1	3956299999.9999995	+		28826	11551	14267	14326	33086	33086					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5668823122978	1	840.566549	839.559273	3.0307	0.0025475	-1.5708	-0.0013204	1.4599	0.0012271	840.5655640410932	108.31	0.58823	108.46	108.35	108.94	0.15795					52	30	3	0	0	0	0.89198	1	46703	46703		0	0	1	45435000	+		28827	11551	14267	14326	33087	33087					0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	420.786913	839.559273	0.28713	0.00012082	-2.9466	-0.0012399	-2.6595	-0.0011191	420.78747739027926	107.87	0.28885	107.87	107.72	108.01	0	-0.0081741	0.0010295	NaN	0	48	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1850299999.9999998	+		28828	11551	14267	14326							0.1330757338200783
RLLLAAAL	8	Unmodified	_RLLLAAAL_					0	0	0			REV__ENSG00000187773|ENST00000343998|DIPK1C	REV__ENSG00000187773|ENST00000343998|DIPK1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	420.786913	839.559273	3.0327	0.0012761	-5.1525	-0.0021681	-2.1198	-0.00089197	420.78641992988844	107.83	0.27182	107.89	107.75	108.02	0.052452	0.0081741	-0.00082689	NaN	0	48	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1947099999.9999998	+		28829	11551	14267	14326							0.1330757338200783
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9717895388603	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.342	1	18.342	17.842	18.842	0								0	0	0	0.63775	1	7622	7622		0.30703	0	1				28830	1596	14268	14327	33088	33088					0.24089733163168603
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9707519412041	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.495	1	29.495	28.995	29.995	0								0	0	0	0.63775	1	12348	12348		1.3295	0	1				28831	1596	14268	14327	33089	33089					0.24089733163168603
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9708129763603	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.751	1	43.751	43.251	44.251	0								0	0	0	0.63775	1	18312	18312		1.3295	0	1				28832	1596	14268	14327	33090	33090					0.24089733163168603
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	701.9700195193291	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.517	1	52.517	52.017	53.017	0								0	0	0	0.63775	1	21902	21902		0	0	1				28833	1596	14268	14327	33091	33091					0.24089733163168603
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	701.9709350466728	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.11	1	32.405	31.905	32.905	0.29431								0	0	0	0.63775	1	13477	13477		1.3295	0	1				28834	1596	14268	14327	33092	33092					0.24089733163168603
RLLLKFIKIMK	11	Unmodified	_RLLLKFIKIMK_					0	0	0		nc|ENSG00000107263|Q13905-2|RAPGEF1;nc|ENSG00000107263|Q13905|RAPGEF1;nc|ENSG00000107263|Q13905-4|RAPGEF1;nc|ENSG00000107263|Q13905-3|RAPGEF1;ENSG00000107263|ENST00000683357|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	nc|ENSG00000107263|Q13905-2|RAPGEF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	701.9715453982353	2	701.970168	1401.92578	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.37	1	39.682	39.182	40.182	0.31263								0	0	0	0.63775	1	16558	16558		1.3295	0	1				28835	1596	14268	14327	33093	33093					0.24089733163168603
RLLLLLLLLA	10	Unmodified	_RLLLLLLLLA_					0	0	0		nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;ENSG00000204962|ENST00000531613|PCDHA8;PCDHA4|p.E422Gfs*17|1|0.51|ENSG00000204967|chr5:140808451-140808452|-/GACCACACTCAATCAATCACTGGTACAATGTGTACCAC|frameshift_variant;nc|ENSG00000204967|Q9UN74-2|PCDHA4;ENSG00000204967|ENST00000530339|PCDHA4	nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.9197875857353	2	575.917927	1149.8213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.759	1	53.082	52.582	53.582	0.32283								0	0	0	0.66264	1	22104	22104		0	0	1				28836	5169	14269	14328	33094	33094					0.2523835467814024
RLLLPKLELR	10	Unmodified	_RLLLPKLELR_					0	0	0			REV__FANCE|p.Q332Pfs*22|1|0.04|ENSG00000112039|chr6:35458322-35458323|AG/-|frameshift_variant	REV__FANCE|p.Q332Pfs*22|1|0.04|ENSG00000112039|chr6:35458322-35458323|AG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	417.1557494997978	3	417.615085	1249.82343	0.19051	7.9559E-05	-0.92828	-0.00038766	-0.73777	-0.0003081	417.61502948439096	101.79	0.12315	101.79	101.71	101.83	0					6	3	2	0	0	0	0.12561	1	42622	42622		0.12286	0.12286	1	216880	+		28837	9350	14270	14329	33095	33095					0.20850783415903607
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.3536254763603	2	517.353286	1032.69202	1.4607	0.0007557	-0.72106	-0.00037304	0.73964	0.00038266	517.3528297655936	107.66	0.20641	107.66	107.55	107.75	0					37	10	5	0	0	0	0.89198	1	46237	46237		0	0	1	364960000	+		28838	13749	14271	14330	33096	33096					0.1769801783868843
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.3535644412041	2	517.353286	1032.69202	2.9117	0.0015064	-1.7544	-0.00090763	1.1573	0.00059875	517.3523151831997	107.62	0.22569	107.67	107.56	107.79	0.052452					40	11	5	0	0	0	0.89198	1	46112	46112		0	0	1	613010000	+		28839	13749	14271	14330	33097	33097					0.1769801783868843
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3536865115166	2	517.353286	1032.69202	3.3591	0.0017379	-2.6833	-0.0013882	0.67589	0.00034967	517.3517335039329	106.08	0.25527	106.24	106.14	106.39	0.15781					39	13	4	0	0	0	0.89198	1	45390	45390		0	0	1	651360000	+		28840	13749	14271	14330	33098	33098					0.1769801783868843
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3547851443291	2	517.353286	1032.69202	3.3589	0.0017377	-2.7286	-0.0014117	0.63023	0.00032605	517.3519208500431	107.6	0.67186	107.76	107.21	107.88	0.15781					66	34	5	0	0	0	0.89198	2	46280	46280;46343		0	0	1	1227900000	+		28841	13749	14271	14330	33099;33100	33099					0.1769801783868843
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.6916992068291	2	517.353286	1032.69202	3.3589	0.0017377	-2.7286	-0.0014117	0.63023	0.00032605	517.3519208500431	107.6	0.67186	107.76	107.21	107.88	0.15781					66	34	5	0	0	0	2.3239	1	46203	46203		0	0	1	1227900000	+		28842	13749	14271	14330	33101	33101					0.1769801783868843
RLLLRHLL	8	Unmodified	_RLLLRHLL_					0	0	0			REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	REV__ENST00000535984.1_1_11:113285130-113295217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3525268435478	2	517.353286	1032.69202	3.399	0.0017585	-3.5976	-0.0018613	-0.19869	-0.00010279	517.3513573606931	107.57	0.22544	107.73	107.6	107.83	0.15795					42	11	5	0	0	0	0.89198	1	46290	46290		0	0	1	1403400000	+		28843	13749	14271	14330	33102	33102					0.1769801783868843
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9214355349541	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.877	1	20.877	20.377	21.377	0								0	0	0	0.42693	1	8679	8679		0.52476	0	1		+		28844	8268	14272	14331	33103	33103					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9216796755791	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.952	1	12.646	12.146	13.146	0.69396								0	0	0	0.42693	1	4965	4965		0.52476	0	1		+		28845	8268	14272	14331	33104	33104					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9230224490166	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.051	1	12.745	12.245	13.245	0.69396								0	0	0	0.42693	1	5007	5007		0.52476	0	1		+		28846	8268	14272	14331	33105	33105					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9235107302666	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.152	1	12.846	12.346	13.346	0.69396								0	0	0	0.42693	1	5049	5049		0.52476	0	1		+		28847	8268	14272	14331	33106	33106					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9230834841728	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.258	1	12.952	12.452	13.452	0.69396								0	0	0	0.42693	1	5092	5092		0.52476	0	1		+		28848	8268	14272	14331	33107	33107					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9210082888603	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.602	1	13.296	12.796	13.796	0.69396								0	0	0	0.42693	1	5234	5234		0.52476	0	1		+		28849	8268	14272	14331	33108	33108					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9213744997978	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.724	1	13.418	12.918	13.918	0.69396								0	0	0	0.42693	1	5284	5284		0.52476	0	1		+		28850	8268	14272	14331	33109	33109					0.2397244494975439
RLLLRLRLR	9	Unmodified	_RLLLRLRLR_					0	0	0			REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	REV__chr16:70664449-70664920|104|13.06|0.42|4.94|-|1|MTSS2,MTSS2|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	604.9205810427666	2	604.924941	1207.83533	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.856	1	13.582	13.082	14.082	0.72639								0	0	0	0.42693	1	5338	5338		0.52476	0	1		+		28851	8268	14272	14331	33110	33110					0.2397244494975439
RLLLYFIALAI	11	Unmodified	_RLLLYFIALAI_					0	0	0		nc|ENSG00000104635|Q15043-2|SLC39A14;ENSG00000104635|ENST00000381237|SLC39A14;SLC39A14-PPP3CC|3|fusion;SLC39A14-PPP3CC|1|fusion;SLC39A14-PPP3CC|2|fusion	nc|ENSG00000104635|Q15043-2|SLC39A14	nc|ENSG00000104635|Q15043-2|SLC39A14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.0082275271416	4	327.212784	1304.82203	1.1519	0.00037691	3.1635	0.0010351	4.3154	0.0014121	327.21425328957986	43.738	0.69344	44.062	43.643	44.337	0.32388					26	21	2	0	0	0	0.14606	1	18256	18256		0.094841	0	1	608890			28852	1467	14273	14332	33111	33111					0.18181149327165258
RLLNILMQL	9	Unmodified	_RLLNILMQL_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.3455688357353	2	557.344269	1112.67399	1.2904	0.00071917	0.33732	0.000188	1.6277	0.00090718	557.3443445922155	79.975	0.30687	79.975	79.795	80.102	0					15	9	2	0	0	0	0.30098	1	33280	33280		25.399	9.5521	1	489850			28853	1376	14274	14333	33112	33112					0.12215514801687277
RLLNILMQL	9	Unmodified	_RLLNILMQL_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3448364138603	2	557.344269	1112.67399	2.5665	0.0014304	-0.44049	-0.00024551	2.126	0.0011849	557.3437460653955	78.195	0.51091	79.463	79.246	79.757	1.2682					36	16	3	0	0	0	0.083604	2	32810	32810;32861		54.774	16.622	1	3394900			28854	1376	14274	14333	33113;33114	33113					0.12215514801687277
RLLNILMQL	9	Unmodified	_RLLNILMQL_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3448364138603	2	557.344269	1112.67399	1.2629	0.00070388	-1.4822	-0.00082608	-0.21924	-0.00012219	557.3435632082169	77.607	0.45396	79.358	79.2	79.654	1.7514					35	14	4	0	0	0	0.091139	2	32532	32532;32583		52.268	28.248	1	4123600			28855	1376	14274	14333	33115;33116	33115					0.12215514801687277
RLLNILMQL	9	Unmodified	_RLLNILMQL_					0	0	0		nc|ENSG00000102038|P28370-2|SMARCA1;ENSG00000153147|ENST00000283131|SMARCA5;nc|ENSG00000102038|P28370|SMARCA1;ENSG00000102038|ENST00000371121|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	nc|ENSG00000102038|P28370-2|SMARCA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	557.344269	1112.67399	1.6789	0.0009357	-0.072353	-4.0326E-05	1.6065	0.00089538	557.3439576358172	79.25	0.34793	79.55	79.37	79.718	0.30046	0.093028	0.00046064	NaN	54.774	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	372620			28856	1376	14274	14333							0.12215514801687277
RLLQGRSIKKS	11	Unmodified	_RLLQGRSIKKS_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000474585.1_1_3:45583301-45589019:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2743408083916	3	429.273611	1284.799	1.0986	0.00047159	-0.19541	-8.3886E-05	0.90316	0.0003877	429.2734486270638	94.41	0.52213	94.41	94.119	94.641	0					59	16	5	0	0	0	1.0362	1	39399	39399		1.3296	0.11481	1	26749000			28857	569	14275	14334	33117	33117					0.16799523262397997
RLLQGRSIKKS	11	Unmodified	_RLLQGRSIKKS_					0	0	0		ENSG00000011376|ENST00000645846|LARS2;ENST00000474585.1_1_3:45583301-45589019:+|nuORF	ENSG00000011376|ENST00000645846|LARS2	ENSG00000011376|ENST00000645846|LARS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	429.273611	1284.799	4.2506	0.0018247	-1.9457	-0.00083525	2.3049	0.00098941	429.27267842173205	93.592	0.50883	94.464	94.258	94.767	0.87176	0.0046465	-0.0011489	NaN	1.3296	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10114000			28858	569	14275	14334							0.16799523262397997
RLLQLLLQL	9	Unmodified	_RLLQLLLQL_					0	0	0		ENSG00000109743|ENST00000265016|BST1	ENSG00000109743|ENST00000265016|BST1	ENSG00000109743|ENST00000265016|BST1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3753539919853	2	555.373884	1108.73321	2.4744	0.0013742	1.2301	0.00068314	3.7044	0.0020573	555.3746105878379	84.607	0.36967	86.203	85.972	86.341	1.5962					31	11	3	0	0	0	0.049839	2	35488	35488;35532		68.081	10.609	1	3643800			28859	1676	14276	14335	33118;33119	33118					0.1831973408752674
RLLQLLLQL	9	Unmodified	_RLLQLLLQL_					0	0	0		ENSG00000109743|ENST00000265016|BST1	ENSG00000109743|ENST00000265016|BST1	ENSG00000109743|ENST00000265016|BST1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	555.373884	1108.73321	2.2753	0.0012636	2.1992	0.0012214	4.4744	0.002485	555.3731997506197	85.139	0.24718	86.298	86.086	86.333	1.159	0.047462	0.0010236	NaN	68.081	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3518200			28860	1676	14276	14335							0.1831973408752674
RLLRKPARR	9	Unmodified	_RLLRKPARR_					0	0	0			REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3925659060478	2	583.391265	1164.76798	3.1751	0.0018523	-0.994	-0.00057989	2.1811	0.0012724	583.3906916155316	105.96	0.17596	106.12	106.03	106.21	0.16676					26	8	5	0	0	0	0.85019	1	45187	45187		0.52476	0	1	496200000	+		28861	14154	14277	14336	33120	33120					0.19218414738838874
RLLRKPARR	9	Unmodified	_RLLRKPARR_					0	0	0			REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	583.391265	1164.76798	3.0994	0.0018082	-0.53002	-0.00030921	2.5694	0.001499	583.3910109911412	105.98	0.15637	106.14	106.06	106.21	0.15859	0.04705	-0.0002638	NaN	0.52476	26	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421670000	+		28862	14154	14277	14336							0.19218414738838874
RLLRKPARR	9	Unmodified	_RLLRKPARR_					0	0	0			REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	REV__ENST00000609879.1_1_1:149399040-149399154:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	583.391265	1164.76798	3.1751	0.0018523	-0.994	-0.00057989	2.1811	0.0012724	583.3906916155316	105.96	0.17596	106.12	106.03	106.21	0.16676	0.030385	-0.00080516	NaN	0.52476	26	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	496200000	+		28863	14154	14277	14336							0.19218414738838874
RLLSFVVLA	9	Unmodified	_RLLSFVVLA_					0	0	0		ENST00000472898.5_1_1:155981561-155990687:-|nuORF;chr1:156020167-156020337|155|13.06|0.31|5.39|-|0|SSR2,None|1;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3268310427666	2	509.326402	1016.63825	1.874	0.0009545	-0.79367	-0.00040424	1.0804	0.00055026	509.3257880139376	71.272	0.6012	71.272	71.067	71.668	0					56	18	4	0	0	0	0.21592	2	29710	29673;29710		31.268	3.2443	1	18799000			28864	6763	14278	14337	33121;33122	33122					0.1305980061632681
RLLSFVVLA	9	Unmodified	_RLLSFVVLA_					0	0	0		ENST00000472898.5_1_1:155981561-155990687:-|nuORF;chr1:156020167-156020337|155|13.06|0.31|5.39|-|0|SSR2,None|1;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3263427615166	2	509.326402	1016.63825	1.5564	0.00079271	-1.0331	-0.00052617	0.52332	0.00026654	509.3258335197192	70.569	0.59219	70.891	70.678	71.27	0.32224					59	18	4	0	0	0	0.10473	3	29550	29550;29589;29628		47.749	11.622	1	22463000			28865	6763	14278	14337	33123;33124;33125	33123					0.1305980061632681
RLLSFVVLA	9	Unmodified	_RLLSFVVLA_					0	0	0		ENST00000472898.5_1_1:155981561-155990687:-|nuORF;chr1:156020167-156020337|155|13.06|0.31|5.39|-|0|SSR2,None|1;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3265869021416	2	509.326402	1016.63825	1.7271	0.00087966	-3.228	-0.0016441	-1.5009	-0.00076445	509.32472671157507	68.72	0.73042	70.573	70.217	70.948	1.853					69	23	5	0	0	0	0.21592	2	28795	28795;28846		31.268	5.869	1	72425000			28866	6763	14278	14337	33126;33127	33126					0.1305980061632681
RLLSFVVLA	9	Unmodified	_RLLSFVVLA_					0	0	0		ENST00000472898.5_1_1:155981561-155990687:-|nuORF;chr1:156020167-156020337|155|13.06|0.31|5.39|-|0|SSR2,None|1;ENST00000532074.5_1_1:155984857-155990687:-|nuORF;ENST00000484320.6_1_1:155988041-155990687:-|nuORF;ENST00000368311.5_1_1:155984733-155990735:-|nuORF;ENSG00000163479|ENST00000295702|SSR2	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	509.326402	1016.63825	2.4367	0.0012411	-4.3173	-0.0021989	-1.8805	-0.00095781	509.32413158330394	69.377	0.68533	70.743	70.317	71.002	1.3657	0.084787	-0.00059077	NaN	31.268	67	22	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83102000			28867	6763	14278	14337							0.1305980061632681
RLLVMKRQRQR	11	Unmodified	_RLLVMKRQRQR_					0	0	0			REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	REV__ENST00000560608.5_1_15:58971480-59041769:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	742.4639770388603	2	742.459353	1482.90415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.902	1	87.449	86.949	87.949	1.547								0	0	0	0.63775	1	36160	36160		0.30703	0	1		+		28868	13885	14279	14338	33128	33128					0.18201741187158405
RLLWRRLKPL	10	Unmodified	_RLLWRRLKPL_					0	0	0		ENSG00000064687|ENST00000263094|ABCA7;nc|ENSG00000064687|Q8IZY2-2|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	ENSG00000064687|ENST00000263094|ABCA7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.7275878787041	4	338.476575	1349.87719	-2.183	-0.00073889	4.414	0.001494	2.231	0.00075516	338.47802837821433	27.324	0.27507	27.324	27.075	27.35	0					11	8	2	0	0	0	0.12557	1	11423	11423		1.7423	1.0446	1	650220			28869	777	14280	14339	33129	33129					0.21625000638300662
RLLWVSLVPV	10	Unmodified	_RLLWVSLVPV_					0	0	0			REV__ENST00000396720.7_1_19:48206015-48206201:+|nuORF	REV__ENST00000396720.7_1_19:48206015-48206201:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5859557986259	3	394.585015	1180.73321	2.0949	0.00082662	1.3989	0.000552	3.4939	0.0013786	394.5856599227368	61.284	0.65049	61.614	61.391	62.041	0.32974					44	20	3	0	0	0	0.86043	1	25664	25664		3.0723	0	1	958630	+		28870	12854	14281	14340	33130	33130					0.15007734087498648
RLLYLLQLP	9	Unmodified	_RLLYLLQLP_					0	0	0		ENST00000471452.1_1_22:23637243-23644890:+|nuORF	ENST00000471452.1_1_22:23637243-23644890:+|nuORF	ENST00000471452.1_1_22:23637243-23644890:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.2693359255791	3	376.909498	1127.70667	0.25383	9.5671E-05	0.044372	1.6724E-05	0.2982	0.0001124	376.90919362880265	22.14	0.18188	23.317	23.231	23.413	1.177					8	5	2	0	0	0	0.11954	1	9273	9273		0.26902	0	1	361770			28871	6742	14282	14341	33131	33131					0.14792045196190884
RLLYLLQLP	9	Unmodified	_RLLYLLQLP_					0	0	0		ENST00000471452.1_1_22:23637243-23644890:+|nuORF	ENST00000471452.1_1_22:23637243-23644890:+|nuORF	ENST00000471452.1_1_22:23637243-23644890:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	376.909498	1127.70667	-1.2093	-0.00045579	0.79969	0.00030141	-0.40959	-0.00015438	376.9093318235228	23.558	0.15228	23.558	23.504	23.656	0	0.12066	0.00068367	NaN	0.26902	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	217310			28872	6742	14282	14341							0.14792045196190884
RLMGSILGV	9	Unmodified	_RLMGSILGV_					0	0	0		TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant;nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11;ENST00000548943.1_1_12:106565027-106566212:+|nuORF	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2808105349541	2	473.281137	944.547722	0.88317	0.00041799	1.2933	0.0006121	2.1765	0.0010301	473.28142933942047	51.417	0.32684	52.81	52.621	52.948	1.3938					23	10	3	0	0	0	0.18809	1	21552	21552		34.402	4.1769	1	3066700			28873	1305	14283	14342	33132	33132					0.07323008296407352
RLMGSILGV	9	Unmodified	_RLMGSILGV_					0	0	0		TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant;nc|ENSG00000100815|Q15643-2|TRIP11;ENSG00000100815|ENST00000267622|TRIP11;ENST00000548943.1_1_12:106565027-106566212:+|nuORF	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2821533083916	2	473.281137	944.547722	0.3262	0.00015439	2.4565	0.0011626	2.7827	0.001317	473.2820734644176	50.825	0.33697	52.801	52.575	52.912	1.9753					21	10	3	0	0	0	0.20244	1	21271	21271		32.786	4.2988	1	2821800			28874	1305	14283	14342	33133	33133					0.07323008296407352
RLNKMFVG	8	Unmodified	_RLNKMFVG_					0	0	0		nc|ENSG00000164938|Q96A56-2|TP53INP1;ENSG00000164938|ENST00000342697|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	nc|ENSG00000164938|Q96A56-2|TP53INP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	322.1862365603447	3	322.184745	963.532406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.451	1	51.844	51.344	52.344	1.3938								0	0	0	1.0178	1	21116	21116		0.45834	0	1				28875	3806	14284	14343	33134	33134					0.049181414992062855
RLNRRIRRLLN	11	Unmodified	_RLNRRIRRLLN_					0	0	0			REV__tr|A0A7D6ZEY6|A0A7D6ZEY6_9CLOTN-acetylmuramoyl-L-alanineamidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12795PE=3SV=1	REV__tr|A0A7D6ZEY6|A0A7D6ZEY6_9CLOTN-acetylmuramoyl-L-alanineamidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12795PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1021606326103	4	370.741834	1478.93823	1.9307	0.0007158	0.062729	2.3256E-05	1.9935	0.00073906	370.74226258230925	61.153	0.46407	63.118	62.912	63.377	1.9653					16	14	2	0	0	0	0.14606	1	25585	25585		0	0	1	1333500	+		28876	15624	14285	14344	33135	33135					0.21791905670465894
RLNWLKIRP	9	Unmodified	_RLNWLKIRP_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508727908134	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.067	1	30.353	29.853	30.853	0.2859								0	0	0	0.42693	1	12596	12596		1.1933	0.41681	1				28877	2893	14286	14345	33136	33136					0.14536787896099668
RLNWLKIRP	9	Unmodified	_RLNWLKIRP_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2516662478447	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.949	1	74.759	74.259	75.259	1.8101								0	0	0	0.42693	1	30603	30603		1.1933	0.12188	1				28878	2893	14286	14345	33137	33137					0.14536787896099668
RLPAWQPLL	9	Unmodified	_RLPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3317748904228	2	547.329476	1092.6444	2.7649	0.0015133	0.51326	0.00028092	3.2781	0.0017942	547.3297638909236	61.463	0.46238	62.881	62.683	63.145	1.4177					39	14	3	0	0	0	0.10294	3	25745	25745;25795;25850		48.346	0	1	8053200			28879	4597	14287	14346	33138;33139;33140	33138					0.10178318847852097
RLPAWQPLL	9	Unmodified	_RLPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3313476443291	2	547.329476	1092.6444	2.7389	0.0014991	-1.1776	-0.00064454	1.5613	0.00085454	547.3291267789298	62.917	0.46245	64.33	64.103	64.566	1.4134					35	14	3	0	0	0	0.13873	2	26371	26371;26424		39.957	0	1	2933500			28880	4597	14287	14346	33141;33142	33141					0.10178318847852097
RLPAWQPLL	9	Unmodified	_RLPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3311035037041	2	547.329476	1092.6444	2.7795	0.0015213	0.38165	0.00020889	3.1612	0.0017302	547.3297831288482	60.882	0.4887	62.848	62.668	63.157	1.9653					40	15	4	0	0	0	0.076627	3	25558	25513;25558;25613		57.471	0	1	6366600			28881	4597	14287	14346	33143;33144;33145	33144					0.10178318847852097
RLPAWQPLL	9	Unmodified	_RLPAWQPLL_					0	0	0		ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	ENSG00000182107|ENST00000555868|TMEM30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3316528201103	2	547.329476	1092.6444	3.0475	0.001668	-0.60352	-0.00033033	2.444	0.0013376	547.3294410612287	62.261	0.51504	64.218	63.999	64.514	1.9571					37	16	3	0	0	0	0.13873	2	26124	26124;26176		39.957	0	1	2853000			28882	4597	14287	14346	33146;33147	33146					0.10178318847852097
RLPDLIIFL	9	Unmodified	_RLPDLIIFL_					0	0	0		ENSG00000122140|ENST00000241600|MRPS2	ENSG00000122140|ENST00000241600|MRPS2	ENSG00000122140|ENST00000241600|MRPS2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2188598513603	2	550.347335	1098.68012	1.5197	0.00083638	1.4662	0.00080689	2.9859	0.0016433	550.348268695434	93.657	0.25319	93.657	93.552	93.805	0					12	7	2	0	0	0	0.11916	1	39117	39117		1.8442	0	1	352990			28883	2149	14288	14347	33148	33148					0.1347235630485102
RLPDLIIFL	9	Unmodified	_RLPDLIIFL_					0	0	0		ENSG00000122140|ENST00000241600|MRPS2	ENSG00000122140|ENST00000241600|MRPS2	ENSG00000122140|ENST00000241600|MRPS2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2187377810478	2	550.347335	1098.68012	2.6451	0.0014557	1.0319	0.00056788	3.677	0.0020236	550.34786575913	93.046	0.29597	93.214	93.092	93.387	0.16835					12	8	2	0	0	0	0.11833	1	38964	38964		1.8442	0	1	314000			28884	2149	14288	14347	33149	33149					0.1347235630485102
RLPEEWSQW	9	Unmodified	_RLPEEWSQW_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.7990600466728	2	615.798737	1229.58292	0.71766	0.00044194	-0.92005	-0.00056657	-0.20239	-0.00012463	615.798675529176	50.952	0.54137	52.345	52.139	52.68	1.3938					41	17	4	0	0	0	0.043696	2	21346	21298;21346		72.968	38.566	1	3609500			28885	1559	14289	14348	33150;33151	33151					-0.022686576421165228
RLPEEWSQW	9	Unmodified	_RLPEEWSQW_					0	0	0		ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	ENSG00000106211|ENST00000248553|HSPB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.7996703982353	2	615.798737	1229.58292	0.89698	0.00055236	-2.094	-0.0012895	-1.197	-0.0007371	615.7980651012064	50.362	0.50983	52.338	52.158	52.668	1.9763					36	16	3	0	0	0	0.032536	2	21071	21071;21138		83.429	56.545	1	3515400			28886	1559	14289	14348	33152;33153	33152					-0.022686576421165228
RLPEIYIQL	9	Unmodified	_RLPEIYIQL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;EHD4|p.A361Rfs*7|1|0.08|ENSG00000103966|chr15:41909707-41909708|-/G|frameshift_variant	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	572.8419677615166	2	572.839874	1143.66519	1.4067	0.00080584	0.23393	0.000134	1.6407	0.00093984	572.8403611443396	69.062	0.24747	69.062	68.955	69.202	0					13	7	2	0	0	0	0.42097	1	28758	28758		19.362	1.227	1	286730			28887	1445	14290	14349	33154	33154					0.09910864436847078
RLPEIYIQL	9	Unmodified	_RLPEIYIQL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;EHD4|p.A361Rfs*7|1|0.08|ENSG00000103966|chr15:41909707-41909708|-/G|frameshift_variant	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	572.839874	1143.66519	1.4244	0.00081593	0.063704	3.6492E-05	1.4881	0.00085243	572.8405847345808	68.519	0.24663	68.841	68.721	68.967	0.32224	-0.017932	-3.8734E-05	NaN	19.362	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	392610			28888	1445	14290	14349							0.09910864436847078
RLPEPLPSW	9	Unmodified	_RLPEPLPSW_					0	0	0		ENST00000548968.1_1_12:59307761-59313848:-|nuORF;ENSG00000139263|ENST00000320743|LRIG3	ENST00000548968.1_1_12:59307761-59313848:-|nuORF	ENST00000548968.1_1_12:59307761-59313848:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8051025271416	2	547.803291	1093.59203	1.3426	0.00073549	1.8939	0.0010375	3.2365	0.001773	547.8047580367526	54.837	0.61724	56.241	55.964	56.581	1.4048					50	20	3	0	0	0	0.062093	3	22948	22899;22948;23005		69.105	23.084	1	5350500			28889	2871	14291	14350	33155;33156;33157	33156					0.04897735714234841
RLPEPLPSW	9	Unmodified	_RLPEPLPSW_					0	0	0		ENST00000548968.1_1_12:59307761-59313848:-|nuORF;ENSG00000139263|ENST00000320743|LRIG3	ENST00000548968.1_1_12:59307761-59313848:-|nuORF	ENST00000548968.1_1_12:59307761-59313848:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.8068115115166	2	547.803291	1093.59203	1.9441	0.001065	0.4861	0.00026628	2.4302	0.0013313	547.804097750356	54.411	0.6069	56.379	56.032	56.639	1.9684					48	19	3	0	0	0	0.10478	3	22718	22718;22766;22820		60.074	29.437	1	4190600			28890	2871	14291	14350	33158;33159;33160	33158					0.04897735714234841
RLPESFPEL	9	Unmodified	_RLPESFPEL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;nc|ENSG00000137269|Q9BTT6-2|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2938110232353	2	544.292756	1086.57096	0.98473	0.00053598	2.7594	0.0015019	3.7441	0.0020379	544.2931009579141	52.191	0.65837	53.587	53.395	54.053	1.3966					45	20	3	0	0	0	0.1109	1	21877	21877		45.7	1.8413	1	1456800			28891	2764	14292	14351	33161	33161					0.031137256147076187
RLPESFPEL	9	Unmodified	_RLPESFPEL_					0	0	0		ENSG00000137269|ENST00000370888|LRRC1;nc|ENSG00000137269|Q9BTT6-2|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	ENSG00000137269|ENST00000370888|LRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2937499880791	2	544.292756	1086.57096	0.73837	0.00040189	0.0026427	1.4384E-06	0.74101	0.00040333	544.2927910611081	51.641	0.49765	53.613	53.364	53.862	1.9722					22	15	2	0	0	0	0.20244	1	21644	21644		32.786	2.1491	1	969470			28892	2764	14292	14351	33162	33162					0.031137256147076187
RLPETLPSL	9	Unmodified	_RLPETLPSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.3036376833916	2	513.303124	1024.5917	2.2461	0.0011529	-0.36323	-0.00018645	1.8828	0.00096646	513.302912487633	50.3	0.8589	50.3	49.991	50.85	0					64	27	3	0	0	0	0.04812	5	20973	20933;20973;21025;21068;21123		69.105	23.32	1	5468300			28893	1733	14293	14352	33163;33164;33165;33166;33167	33164					0.0803831599437217
RLPETLPSL	9	Unmodified	_RLPETLPSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3040038943291	2	513.303124	1024.5917	1.8806	0.00096532	0.88828	0.00045596	2.7689	0.0014213	513.3034790774198	49.845	0.97309	50.175	49.696	50.669	0.33019					65	30	3	0	0	0	0.04812	4	20843	20805;20843;20930;20974		69.105	19.172	1	5760900			28894	1733	14293	14352	33168;33169;33170;33171	33169					0.0803831599437217
RLPETLPSL	9	Unmodified	_RLPETLPSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.3043090701103	2	513.303124	1024.5917	1.7757	0.00091146	0.58143	0.00029845	2.3571	0.0012099	513.3034052580306	48.424	1.3368	49.812	49.272	50.609	1.388					141	42	5	0	0	0	0.037098	9	20182	20099;20147;20182;20221;20261;20313;20352;20407;20499		78.728	25.247	1	38784000			28895	1733	14293	14352	33172;33173;33174;33175;33176;33177;33178;33179;33180	33174					0.0803831599437217
RLPETLPSL	9	Unmodified	_RLPETLPSL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.3040038943291	2	513.303124	1024.5917	2.7183	0.0013953	-0.57367	-0.00029446	2.1447	0.0011009	513.3028237964893	47.971	1.2933	49.948	49.344	50.637	1.9772					134	41	4	0	0	0	0.037098	9	20039	19902;19953;20000;20039;20079;20130;20169;20274;20334		78.728	36.633	1	28392000			28896	1733	14293	14352	33181;33182;33183;33184;33185;33186;33187;33188;33189	33184					0.0803831599437217
RLPEVEVPQHL	11	Unmodified	_RLPEVEVPQHL_					0	0	0		ENSG00000104805|ENST00000405315|NUCB1;ENST00000485798.5_1_19:49403599-49425678:+|nuORF;ENST00000492367.1_1_19:49422384-49425678:+|nuORF	ENSG00000104805|ENST00000405315|NUCB1	ENSG00000104805|ENST00000405315|NUCB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.9175598025322	3	439.582221	1315.72483	1.964	0.00086335	-0.067784	-2.9797E-05	1.8962	0.00083355	439.91647457079125	40.027	0.30975	41.889	41.646	41.956	1.8624					14	9	2	0	0	0	0.93952	1	16764	16764		7.4291	5.5016	1	445650			28897	1475	14294	14353	33190	33190					0.079601353802218
RLPKDPKIRE	10	Unmodified	_RLPKDPKIRE_					0	0	0		ENSG00000149782|ENST00000279230|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	ENSG00000149782|ENST00000279230|PLCB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9236938357353	3	417.922578	1250.7459	3.2346	0.0013518	-0.39616	-0.00016556	2.8385	0.0011863	417.9221265278933	93.288	0.53644	94.565	94.26	94.797	1.277					55	16	5	0	0	0	0.89803	1	39241	39241		0.15932	0	1	12902000			28898	3251	14295	14354	33191	33191					0.13056145479708903
RLPKLKHV	8	Unmodified	_RLPKLKHV_					0	0	0		nc|ENSG00000114631|Q9NZ53-2|PODXL2;ENSG00000114631|ENST00000342480|PODXL2	nc|ENSG00000114631|Q9NZ53-2|PODXL2	nc|ENSG00000114631|Q9NZ53-2|PODXL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	495.8343078494072	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.91	1	115.91	115.41	116.41	0								0	0	0	1.0178	1	50010	50010		0.69038	0	1				28899	1873	14296	14355	33192	33192					0.15458042430316254
RLPLSRGRV	9	Unmodified	_RLPLSRGRV_					0	0	0			REV__ENST00000393965.7_1_2:74709990-74710182:-|nuORF	REV__ENST00000393965.7_1_2:74709990-74710182:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.8916808962822	3	351.892842	1052.6567	-1.1928	-0.00041973	-2.0352	-0.00071619	-3.228	-0.0011359	351.8918143452184	72.443	0.44629	72.443	72.173	72.62	0					22	13	2	0	0	0	0.847	1	30187	30187		0.96228	0	1	683810	+		28900	12822	14297	14356	33193	33193					0.13247355310886633
RLPLSRGRV	9	Unmodified	_RLPLSRGRV_					0	0	0			REV__ENST00000393965.7_1_2:74709990-74710182:-|nuORF	REV__ENST00000393965.7_1_2:74709990-74710182:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	351.892842	1052.6567	-1.1928	-0.00041973	-2.0352	-0.00071619	-3.228	-0.0011359	351.8918143452184	72.443	0.44629	72.443	72.173	72.62	0	0	0	NaN	0.96228	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	683810	+		28901	12822	14297	14356							0.13247355310886633
RLPRAPVV	8	Unmodified	_RLPRAPVV_					0	0	0		ENST00000493216.1_1_22:20939304-20939799:+|nuORF	ENST00000493216.1_1_22:20939304-20939799:+|nuORF	ENST00000493216.1_1_22:20939304-20939799:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1995117068291	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.277	1	33.572	33.072	34.072	0.29467								0	0	0	1.0178	1	13974	13974		0.45834	0	1				28902	6924	14298	14357	33194	33194					0.11929493987838669
RLPRRRPRAR	10	Unmodified	_RLPRRRPRAR_					0	0	0		ENST00000481801.5_1_2:134877617-135011878:+|nuORF;ENST00000468758.1_1_2:134877617-135010711:+|nuORF	ENST00000481801.5_1_2:134877617-135011878:+|nuORF	ENST00000481801.5_1_2:134877617-135011878:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1212341189384	3	445.288589	1332.84394	2.8313	0.0012608	-2.0995	-0.00093487	0.73188	0.0003259	445.28759635868477	50.107	0.59948	51.498	51.229	51.829	1.3911					35	18	2	0	0	0	0.12557	1	21057	21057		0.56317	0.057215	1	9298000			28903	6720	14299	14358	33195	33195					0.19082811638963904
RLPRRRPRAR	10	Unmodified	_RLPRRRPRAR_					0	0	0		ENST00000481801.5_1_2:134877617-135011878:+|nuORF;ENST00000468758.1_1_2:134877617-135010711:+|nuORF	ENST00000481801.5_1_2:134877617-135011878:+|nuORF	ENST00000481801.5_1_2:134877617-135011878:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1197082400322	3	445.288589	1332.84394	1.7429	0.00077608	-1.0994	-0.00048954	0.6435	0.00028654	445.28805915561065	50.651	0.8495	52.045	51.801	52.65	1.3938					35	27	2	0	0	0	0.12557	1	21311	21311		0.56317	0.10865	1	6552300			28904	6720	14299	14358	33196	33196					0.19082811638963904
RLPSSWALF	9	Unmodified	_RLPSSWALF_					0	0	0		ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7993041872978	2	538.798009	1075.58147	2.1155	0.0011398	-0.88531	-0.000477	1.2302	0.00066282	538.7975489925855	66.378	0.48589	67.767	67.448	67.934	1.3888					32	15	3	0	0	0	0.15456	2	27800	27800;27852		38.176	7.539	1	4288100			28905	2410	14300	14359	33197;33198	33197					0.04669753059783943
RLPSSWALF	9	Unmodified	_RLPSSWALF_					0	0	0		ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	ENSG00000129636|ENST00000320640|ITFG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7979614138603	2	538.798009	1075.58147	1.8701	0.0010076	-1.5799	-0.00085126	0.29017	0.00015634	538.7971673825623	65.847	0.51572	67.755	67.466	67.982	1.9085					27	16	2	0	0	0	0.3091	2	27593	27593;27642		24.991	6.8446	1	3059300			28906	2410	14300	14359	33199;33200	33199					0.04669753059783943
RLQDELVTL	9	Unmodified	_RLQDELVTL_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;ENST00000484393.1_1_1:39751227-39753267:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8129760622978	2	543.811313	1085.60807	2.0601	0.0011203	-2.8792	-0.0015657	-0.81912	-0.00044544	543.809614767072	46.996	0.34891	48.379	48.219	48.567	1.3825					26	10	3	0	0	0	0.3091	1	19655	19655		24.991	3.454	1	1439000			28907	2341	14301	14360	33201	33201					0.06869397160471635
RLQKVLKI	8	Unmodified	_RLQKVLKI_					0	0	0			REV__ENST00000555317.5_1_14:35465915-35468856:+|nuORF	REV__ENST00000555317.5_1_14:35465915-35468856:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3484680056572	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.669	1	93.814	93.314	94.314	0.14493								0	0	0	1.0178	1	39209	39209		0.69038	0	1		+		28908	9011	14302	14361	33202	33202					0.18231195744544948
RLQLDDDI	8	Unmodified	_RLQLDDDI_					0	0	0		ENSG00000148158|ENST00000374232|SNX30	ENSG00000148158|ENST00000374232|SNX30	ENSG00000148158|ENST00000374232|SNX30	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2607910037041	2	494.258914	986.503274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.87	1	106.04	105.54	106.54	0.16679								0	0	0	1.0178	1	45143	45143		0.69038	0	1				28909	3198	14303	14362	33203	33203					0.009482756838906425
RLQLWLLL	8	Unmodified	_RLQLWLLL_					0	0	0		nc|ENSG00000249158|Q9Y5I1-2|PCDHA11;ENSG00000249158|ENST00000398640|PCDHA11	nc|ENSG00000249158|Q9Y5I1-2|PCDHA11	nc|ENSG00000249158|Q9Y5I1-2|PCDHA11	MSMS	GG20161007_CRH_Patient100_W632_02	4	352.2328979372978	3	352.230572	1053.66989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.75	1	87.297	86.797	87.797	1.547								0	0	0	1.0178	1	36078	36078		0.40072	0	1				28910	5373	14304	14363	33204	33204					0.14519793370277512
RLQMEAKL	8	Unmodified	_RLQMEAKL_					0	0	0		ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	ENSG00000103319|ENST00000263026|EEF2K	MSMS	GG20161007_CRH_Patient100_A02_02	2	330.1917907595634	3	330.191788	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.467	1	82.748	82.248	83.248	0.2802								0	0	0	1.0178	1	34485	34485		0.40072	0	1				28911	1427	14305	14364	33205	33205					0.05926106808044551
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3280212283134	3	500.991438	1499.95248	2.9953	0.0015006	-0.275	-0.00013777	2.7203	0.0013628	500.9904588416588	105.73	0.14992	105.9	105.82	105.97	0.16679					22	7	4	0	0	0	1.0405	1	45049	45049		0	0	1	39616000	+		28912	9474	14306	14365	33206	33206					0.22250558098676265
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	750.9839965701103	2	750.983518	1499.95248	2.7231	0.002045	-0.8046	-0.00060424	1.9185	0.0014407	750.9822268185935	105.74	0.1086	105.91	105.85	105.95	0.16679					13	5	3	0	0	0	1.0405	1	45064	45064		0	0	1	19418000	+		28913	9474	14306	14365	33207	33207					0.22250558098676265
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	750.983518	1499.95248	1.3537	0.0010166	0.6258	0.00046996	1.9795	0.0014866	751.4859768001506	105.83	0.080444	105.83	105.78	105.86	0	-0.041621	0.0016288	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1580600	+		28914	9474	14306	14365							0.22250558098676265
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	750.983518	1499.95248	2.725	0.0020464	-0.5065	-0.00038037	2.2185	0.0016661	750.9835926224313	105.77	0.081406	105.83	105.78	105.86	0.05455	-0.042791	-7.1875E-05	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4740700	+		28915	9474	14306	14365							0.22250558098676265
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	750.983518	1499.95248	2.4697	0.0018547	-0.37812	-0.00028396	2.0916	0.0015708	750.9828671914134	105.76	0.10841	105.92	105.85	105.96	0.15859	0.045211	0.00012094	NaN	0	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24563000	+		28916	9474	14306	14365							0.22250558098676265
RLQPYKKKRKR	11	Unmodified	_RLQPYKKKRKR_					0	0	0			REV__nc|ENSG00000116539|Q9NR48|ASH1L	REV__nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	750.983518	1499.95248	2.7231	0.002045	-0.8046	-0.00060424	1.9185	0.0014407	750.9822268185935	105.74	0.1086	105.91	105.85	105.95	0.16679	0.039201	-0.0005196	NaN	0	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19418000	+		28917	9474	14306	14365							0.22250558098676265
RLQSRQGV	8	Unmodified	_RLQSRQGV_					0	0	0			REV__nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1	REV__nc|ENSG00000137571|Q9H2Y9-3|SLCO5A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2778198122978	2	472.275232	942.535912	3.5792	0.0016904	2.5117	0.0011862	6.0909	0.0028766	472.276500426938	97.465	0.20957	97.771	97.625	97.835	0.3062					10	6	2	0	0	0	0.88663	1	41012	41012		4.756	0	1	5008700	+		28918	10023	14307	14366	33208	33208					0.06234527597428041
RLRAAAGP	8	Unmodified	_RLRAAAGP_					0	0	0			REV__ENST00000512634.1_1_4:177232731-177241571:-|nuORF	REV__ENST00000512634.1_1_4:177232731-177241571:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.2491943240166	2	406.248486	810.48242	1.7385	0.00070628	-0.82407	-0.00033478	0.91447	0.0003715	406.24806802033487	69.349	1.0912	70.715	70.381	71.472	1.3657					90	35	5	0	0	0	0.89008	1	29186	29186		2.5775	0	1	128900000	+		28919	13581	14308	14367	33209	33209					0.06959774885547176
RLRAAAGP	8	Unmodified	_RLRAAAGP_					0	0	0			REV__ENST00000512634.1_1_4:177232731-177241571:-|nuORF	REV__ENST00000512634.1_1_4:177232731-177241571:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	406.248486	810.48242	1.7385	0.00070628	-0.82407	-0.00033478	0.91447	0.0003715	406.24806802033487	69.349	1.0912	70.715	70.381	71.472	1.3657	0.065567	-0.00046781	NaN	2.5775	90	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	128900000	+		28920	13581	14308	14367							0.06959774885547176
RLRAARLA	8	Unmodified	_RLRAARLA_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.9003478884697	3	309.538399	925.593367	0.48424	0.00014989	-2.8974	-0.00089685	-2.4131	-0.00074696	309.53760771346225	30.997	0.59513	31.287	30.974	31.569	0.29086					47	19	3	0	0	0	2.3239	1	12869	12869		0.40072	0	1	2916600	+		28921	9169	14309	14368	33210	33210					0.1275941459363139
RLRAARLA	8	Unmodified	_RLRAARLA_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	309.538399	925.593367	-2.6969	-0.00083481	-1.6992	-0.00052597	-4.3962	-0.0013608	309.53776897942424	30.938	0.49051	30.938	30.651	31.141	0	-0.12825	0.00095998	NaN	0.40072	49	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5273700	+		28922	9169	14309	14368							0.1275941459363139
RLRAARLA	8	Unmodified	_RLRAARLA_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	309.538399	925.593367	-0.38751	-0.00011995	-3.6004	-0.0011145	-3.9879	-0.0012344	309.5373772215366	29.728	0.45871	31.01	30.705	31.164	1.2825	-0.056367	-0.00080546	NaN	0.40072	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3811300	+		28923	9169	14309	14368							0.1275941459363139
RLRAARLA	8	Unmodified	_RLRAARLA_					0	0	0			REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	REV__ENST00000598681.5_1_19:48248882-48259836:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	309.538399	925.593367	0.10042	3.1085E-05	-3.9574	-0.001225	-3.857	-0.0011939	309.5371725144037	29.232	0.51513	31.03	30.689	31.204	1.7987	-0.036195	-0.001137	NaN	0.40072	41	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3592100	+		28924	9169	14309	14368							0.1275941459363139
RLRAHLPR	8	Unmodified	_RLRAHLPR_					0	0	0		chr16:2967242-2967320|413|63.54|0.49|7.02|+|1|KREMEN2,KREMEN2|1	chr16:2967242-2967320|413|63.54|0.49|7.02|+|1|KREMEN2,KREMEN2|1	chr16:2967242-2967320|413|63.54|0.49|7.02|+|1|KREMEN2,KREMEN2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8235046267509	2	509.822684	1017.63082	4.1495	0.0021155	-0.30111	-0.00015351	3.8483	0.001962	509.82226745779195	90.499	0.42031	91.865	91.607	92.027	1.366					25	12	3	0	0	0	0.89178	1	38140	38140		0.69038	0	1	1486000			28925	210	14310	14369	33211	33211					0.12270505859248715
RLRALGAR	8	Unmodified	_RLRALGAR_					0	0	0		chr7:128863012-128869163|87|72.11|0.78|6.53|-|1|KCP,KCP|1	chr7:128863012-128869163|87|72.11|0.78|6.53|-|1|KCP,KCP|1	chr7:128863012-128869163|87|72.11|0.78|6.53|-|1|KCP,KCP|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5367004275322	3	304.866515	911.577717	-3.0445	-0.00092817	-2.0204	-0.00061594	-5.0649	-0.0015441	304.86583411469604	23.125	0.27409	23.125	22.986	23.26	0					21	8	4	0	0	0	2.3239	1	9591	9591		0.40072	0	1	5378200			28926	279	14311	14370	33212	33212					0.11839128076587713
RLRCERIVP	9	Unmodified	_RLRCERIVP_					0	0	0			REV__ENSG00000163161|ENST00000285398|ERCC3	REV__ENSG00000163161|ENST00000285398|ERCC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3328735232353	2	571.334767	1140.65498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.787	1	84.058	83.558	84.558	0.27029								0	0	0	0.42693	1	35043	35043		2.0598	0.57785	1		+		28927	10674	14312	14371	33213	33213					0.09027978230597
RLRCLRLM	8	Unmodified	_RLRCLRLM_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-10|WDR90	REV__nc|ENSG00000161996|Q96KV7-10|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8177978396416	2	530.815156	1059.61576	1.9511	0.0010357	-1.1746	-0.00062351	0.77643	0.00041214	530.8145629135761	68.579	2.293	70.432	69.441	71.734	1.853					224	73	6	0	0	0	0.88587	1	28905	28905		5.2307	0	1	13483000	+		28928	13841	14313	14372	33214	33214					0.08833554675379673
RLRFLKLK	8	Unmodified	_RLRFLKLK_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF;ENST00000590311.5_1_17:67101582-67103939:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1073.731249988079	1	1073.7306	1072.72332	3.4195	0.0036716	-2.5373	-0.0027244	0.88214	0.00094718	1073.7276245887106	108.1	0.077728	108.26	108.23	108.31	0.15781					16	8	3	0	0	0	0.89198	1	46663	46663		0	0	1	61939000			28929	3380	14314	14373	33215	33215					0.18986590872759734
RLRFLKLK	8	Unmodified	_RLRFLKLK_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF;ENST00000590311.5_1_17:67101582-67103939:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1073.728686511517	1	1073.7306	1072.72332	3.6017	0.0038673	-2.6561	-0.002852	0.9456	0.0010153	1073.726965375738	108.09	0.081009	108.25	108.22	108.3	0.15795					10	8	2	0	0	0	0.89198	1	46593	46593		0	0	1	72220000			28930	3380	14314	14373	33216	33216					0.18986590872759734
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9440185427666	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.67	1	106.84	106.34	107.34	0.16174								0	0	0	0.42693	1	45682	45682		0	0	1				28931	48	14315	14374	33217	33217					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9421264529228	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.78	1	106.94	106.44	107.44	0.16174								0	0	0	0.42693	1	45744	45744		0	0	1				28932	48	14315	14374	33218	33218					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9417602419853	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.89	1	107.06	106.56	107.56	0.16174								0	0	0	0.42693	1	45809	45809		0	0	1				28933	48	14315	14374	33219	33219					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9417602419853	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.01	1	107.17	106.67	107.67	0.16174								0	0	0	0.42693	1	45882	45882		0	0	1				28934	48	14315	14374	33220	33220					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9425536990166	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.11	1	107.27	106.77	107.77	0.16174								0	0	0	0.42693	1	45942	45942		0	0	1				28935	48	14315	14374	33221	33221					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9433471560478	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.34	1	107.49	106.99	107.99	0.15795								0	0	0	0.42693	1	46092	46092		0	0	1				28936	48	14315	14374	33222	33222					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9431640505791	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.27	1	108.42	107.92	108.92	0.15795								0	0	0	0.42693	1	46702	46702		0	0	1				28937	48	14315	14374	33223	33223					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9422485232353	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.38	1	108.54	108.04	109.04	0.15582								0	0	0	0.42693	1	46780	46780		0	0	1				28938	48	14315	14374	33224	33224					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9418823122978	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.49	1	108.65	108.15	109.15	0.1548								0	0	0	0.42693	1	46847	46847		0	0	1				28939	48	14315	14374	33225	33225					0.2691701798385111
RLRKKKKKK	9	Unmodified	_RLRKKKKKK_					0	0	0		AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	AluSp_dup39301|chr16:1930659-1930828:-|18.54670761991336|0.0050555689467179|11.84|385.0|4|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.9418212771416	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.61	1	108.76	108.26	109.26	0.1548								0	0	0	0.42693	1	46925	46925		0	0	1				28940	48	14315	14374	33226	33226					0.2691701798385111
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.0877563357353	4	359.48366	1433.90553	-1.2773	-0.00045918	1.342	0.00048244	0.064697	2.3257E-05	359.4841121296685	33.257	0.97748	33.257	33.031	34.008	0					60	32	3	0	0	0	0.14606	1	14244	14244		0.094841	0	1	1603300	+		28941	9433	14316	14375	33227	33227					0.20593698547577333
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.1972534060478	3	478.975788	1433.90553	1.5294	0.00073253	-1.7729	-0.00084917	-0.24352	-0.00011664	478.9747759479473	28.882	0.76377	28.882	28.689	29.453	0					41	24	3	0	0	0	0.14606	1	12226	12226		0.094841	0	1	791110	+		28942	9433	14316	14375	33228	33228					0.20593698547577333
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	360.1157714724541	4	359.48366	1433.90553	2.484	0.00089297	1.3728	0.00049349	3.8568	0.0013865	359.4841407997421	112.81	0.16499	112.86	112.8	112.97	0.044189					8	4	3	0	0	0	0.14606	1	48588	48588		0.094841	0	1	898700	+		28943	9433	14316	14375	33229	33229					0.20593698547577333
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.9759399294853	3	478.975788	1433.90553	3.8809	0.0018588	-2.7714	-0.0013274	1.1095	0.00053141	478.97441439922784	97.043	0.14828	97.328	97.242	97.39	0.28442					11	5	3	0	0	0	1.0388	1	40830	40830		0.50596	0	1	5183000	+		28944	9433	14316	14375	33230	33230					0.20593698547577333
RLRKLLSHQKR	11	Unmodified	_RLRKLLSHQKR_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	359.48366	1433.90553	1.9422	0.00069819	3.3224	0.0011943	5.2646	0.0018925	359.4853669121846	112.88	0.12425	113.05	112.98	113.1	0.16914	0.098403	0.0024673	NaN	0.094841	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1018600	+		28945	9433	14316	14375							0.20593698547577333
RLRKRKTLA	9	Unmodified	_RLRKRKTLA_					0	0	0		tr|A0A7D6VNP0|A0A7D6VNP0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13400PE=4SV=1	tr|A0A7D6VNP0|A0A7D6VNP0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13400PE=4SV=1	tr|A0A7D6VNP0|A0A7D6VNP0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13400PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	381.2617065310478	3	381.259524	1140.75674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.44	1	105.49	104.99	105.99	0.056801								0	0	0	0.42693	1	44702	44702		0.23584	0	1				28946	16741	14317	14376	33231	33231					0.19199592644713448
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2376891970634	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.324	1	19.324	18.824	19.824	0								0	0	0	1.0178	1	8030	8030		0.45834	0	1				28947	17171	14318	14377	33232	33232					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2386657595634	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.788	1	24.788	24.288	25.288	0								0	0	0	1.0178	1	10341	10341		0.45834	0	1				28948	17171	14318	14377	33233	33233					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2387573122978	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.926	1	24.926	24.426	25.426	0								0	0	0	1.0178	1	10399	10399		0.45834	0	1				28949	17171	14318	14377	33234	33234					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2390930056572	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.082	1	25.082	24.582	25.582	0								0	0	0	1.0178	1	10466	10466		0.45834	0	1				28950	17171	14318	14377	33235	33235					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2384521365166	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.238	1	14.351	13.851	14.851	0.11295								0	0	0	1.0178	1	5907	5907		0.45834	0	1				28951	17171	14318	14377	33236	33236					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2388488650322	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.468	1	14.581	14.081	15.081	0.11295								0	0	0	1.0178	1	6002	6002		0.45834	0	1				28952	17171	14318	14377	33237	33237					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2393981814384	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.469	1	21.692	21.192	22.192	0.223								0	0	0	1.0178	1	8925	8925		0.45834	0	1				28953	17171	14318	14377	33238	33238					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2371703982353	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.468	1	28.745	28.245	29.245	0.27759								0	0	0	1.0178	1	11910	11910		0.45834	0	1				28954	17171	14318	14377	33239	33239					0.17698017838711166
RLRLILIH	8	Unmodified	_RLRLILIH_					0	0	0		tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	tr|A0A7D6ZWL7|A0A7D6ZWL7_9CLOTCelldivisiontopologicalspecificityfactorOS=ClostridiumintestinaleOX=36845GN=minEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2384216189384	3	345.237949	1032.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.059	1	20.582	20.082	21.082	1.5237								0	0	0	1.0178	1	7924	7924		0.45834	0	1				28955	17171	14318	14377	33240	33240					0.17698017838711166
RLRPARARR	9	Unmodified	_RLRPARARR_					0	0	0			REV__ENST00000356362.6_1_7:105148961-105162615:-|nuORF	REV__ENST00000356362.6_1_7:105148961-105162615:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	384.5820800662041	3	384.583002	1150.72718	0.3453	0.0001328	-2.1095	-0.00081127	-1.7642	-0.00067847	384.5818761439715	23.992	1.0134	25.677	25.149	26.163	1.6845					97	33	4	0	0	0	0.83753	1	10021	10021		0.96228	0	1	14964000	+		28956	12550	14319	14378	33241	33241					0.1578407341919501
RLRPLLRRRL	10	Unmodified	_RLRPLLRRRL_					0	0	0		ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0457946658134	4	337.983561	1347.90514	-2.084	-0.00070437	0.12081	4.0833E-05	-1.9632	-0.00066354	337.98346338401217	29.75	1.0142	29.75	29.394	30.408	0					91	32	4	0	0	0	0.12561	1	12345	12345		0	0	1	6219000			28957	6624	14320	14379	33242	33242					0.2451032361839225
RLRPLLRRRL	10	Unmodified	_RLRPLLRRRL_					0	0	0		ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.0812866091728	4	337.983561	1347.90514	-2.045	-0.00069119	0.50648	0.00017118	-1.5385	-0.00052	337.983618418981	30.688	0.91536	30.688	30.286	31.201	0					59	29	3	0	0	0	0.12561	1	12976	12976		0	0	1	1046900			28958	6624	14320	14379	33243	33243					0.2451032361839225
RLRPLLRRRL	10	Unmodified	_RLRPLLRRRL_					0	0	0		ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9832946658134	4	337.983561	1347.90514	-0.13485	-4.5577E-05	-3.1864	-0.0010769	-3.3212	-0.0011225	337.98221805993785	27.271	0.41741	28.542	28.295	28.712	1.2715					20	13	2	0	0	0	0.89803	1	11408	11408		0.13989	0.04505	1	1604000			28959	6624	14320	14379	33244	33244					0.2451032361839225
RLRPLLRRRL	10	Unmodified	_RLRPLLRRRL_					0	0	0		ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	ENST00000453168.5_1_3:31574222-31574351:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	337.983561	1347.90514	0.52431	0.00017721	-3.2668	-0.0011041	-2.7425	-0.00092691	337.98213022300956	28.475	0.82887	28.754	28.187	29.016	0.2793	0.1868	1.2522E-05	NaN	0.13989	39	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1083100			28960	6624	14320	14379							0.2451032361839225
RLRRIPPRKRF	11	Unmodified	_RLRRIPPRKRF_					0	0	0			REV__ENST00000533277.5_1_11:66610677-66610866:+|nuORF	REV__ENST00000533277.5_1_11:66610677-66610866:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	375.2714721560478	4	374.495565	1493.95315	0.54696	0.00020483	-2.3371	-0.00087522	-1.7901	-0.00067038	374.49464872033667	32.169	0.469	33.994	33.594	34.063	1.8246					21	16	2	0	0	0	0.14606	1	13472	13472		0.094841	0.094841	1	1592600	+		28961	13726	14321	14380	33245	33245					0.2259339753838958
RLRRKFERILY	11	Unmodified	_RLRRKFERILY_					0	0	0		nc|ENSG00000147099|Q9BY41-6|HDAC8;nc|ENSG00000147099|Q9BY41-5|HDAC8;nc|ENSG00000147099|Q9BY41-4|HDAC8;ENSG00000147099|ENST00000373573|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1344787478447	5	310.794576	1548.9365	0.98067	0.00030479	1.6567	0.00051489	2.6373	0.00081967	310.79512754543435	40.226	0.53336	40.539	40.257	40.79	0.31263					23	16	2	0	0	0	0.14606	1	16843	16843		0	0	1	424160			28962	3170	14322	14381	33246	33246					0.18398851861843468
RLRRKFERILY	11	Unmodified	_RLRRKFERILY_					0	0	0		nc|ENSG00000147099|Q9BY41-6|HDAC8;nc|ENSG00000147099|Q9BY41-5|HDAC8;nc|ENSG00000147099|Q9BY41-4|HDAC8;ENSG00000147099|ENST00000373573|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1342040896416	5	310.794576	1548.9365	-0.033669	-1.0464E-05	0.093472	2.9051E-05	0.059803	1.8586E-05	310.79464287407325	38.004	0.26647	39.288	39.196	39.462	1.284					11	9	2	0	0	0	0.14606	1	15990	15990		0	0	1	1049800			28963	3170	14322	14381	33247	33247					0.18398851861843468
RLRRKFERILY	11	Unmodified	_RLRRKFERILY_					0	0	0		nc|ENSG00000147099|Q9BY41-6|HDAC8;nc|ENSG00000147099|Q9BY41-5|HDAC8;nc|ENSG00000147099|Q9BY41-4|HDAC8;ENSG00000147099|ENST00000373573|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	nc|ENSG00000147099|Q9BY41-6|HDAC8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1342651247978	5	310.794576	1548.9365	0.064833	2.015E-05	0.032795	1.0192E-05	0.097628	3.0342E-05	310.7944420246223	37.55	0.28564	39.37	39.169	39.455	1.8202					12	9	2	0	0	0	0.14606	1	15763	15763		0	0	1	613800			28964	3170	14322	14381	33248	33248					0.18398851861843468
RLRRLKHIK	9	Unmodified	_RLRRLKHIK_					0	0	0			REV__ENST00000486527.6_1_2:25016788-25037388:+|nuORF	REV__ENST00000486527.6_1_2:25016788-25037388:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	407.2792846560478	3	407.278919	1218.81493	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.59	1	103.76	103.26	104.26	0.1731								0	0	0	0.42693	1	43651	43651		0	0	1		+		28965	10041	14323	14382	33249	33249					0.21427274289953857
RLRRLTAA	8	Unmodified	_RLRRLTAA_					0	0	0		ENST00000477110.6_1_X:302544-308028:-|nuORF	ENST00000477110.6_1_X:302544-308028:-|nuORF	ENST00000477110.6_1_X:302544-308028:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0555908083916	3	319.54192	955.603932	-2.7729	-0.00088605	-1.782	-0.00056942	-4.5549	-0.0014555	319.5407967948481	27.862	0.56739	27.862	27.471	28.038	0					26	18	2	0	0	0	2.3239	1	11527	11527		0	0	1	845910			28966	6790	14324	14383	33250	33250					0.12435397248054869
RLRRRQRLRRL	11	Unmodified	_RLRRRQRLRRL_					0	0	0			REV__ENSG00000171119|ENST00000303212|NRTN	REV__ENSG00000171119|ENST00000303212|NRTN	MSMS	GG20161007_CRH_Patient100_W632_01	3	527.0197631716728	3	527.01698	1578.02911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.72	1	105.88	105.38	106.38	0.15859								0	0	0	0.63775	1	45092	45092		0	0	1		+		28967	11010	14325	14384	33251	33251					0.26321794438558754
RLRRRQRLRRL	11	Unmodified	_RLRRRQRLRRL_					0	0	0			REV__ENSG00000171119|ENST00000303212|NRTN	REV__ENSG00000171119|ENST00000303212|NRTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	527.0188476443291	3	527.01698	1578.02911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.7	1	105.87	105.37	106.37	0.16679								0	0	0	0.63775	1	45022	45022		0	0	1		+		28968	11010	14325	14384	33252	33252					0.26321794438558754
RLRRRRAA	8	Unmodified	_RLRRRRAA_					0	0	0		ENST00000451493.5_1_13:36920782-36920917:-|nuORF	ENST00000451493.5_1_13:36920782-36920917:-|nuORF	ENST00000451493.5_1_13:36920782-36920917:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	352.2319824099541	3	352.23208	1053.67441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.033	1	87.033	86.533	87.533	0								0	0	0	1.0178	1	36320	36320		1.4819	0	1				28969	6612	14326	14385	33253	33253					0.14972115356408722
RLRRRRHRRR	10	Unmodified	_RLRRRRHRRR_					0	0	0			REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	REV__ENST00000498611.5_1_22:50657979-50682900:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2490417361259	5	304.399762	1516.96243	0.8156	0.00024827	-0.31748	-9.664E-05	0.49812	0.00015163	304.39978604145136	50.638	0.33784	52.032	51.709	52.047	1.3938					12	10	2	0	0	0	0.12561	1	21074	21074		0	0	1	694620	+		28970	13494	14327	14386	33254	33254					0.22462603667304393
RLRRRRRRTVM	11	Unmodified	_RLRRRRRRTVM_					0	0	0			REV__HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant	REV__HSP90AA1|p.E244Kfs*72|1|0.42|ENSG00000080824|chr14:102084929-102084932|TTTC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	778.4892455935478	2	778.486768	1554.95898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.01	1	105.17	104.67	105.67	0.15859								0	0	0	0.63775	1	44637	44637		0	0	1		+		28971	14226	14328	14387	33255	33255					0.20370172778439155
RLRRVIPSRVV	11	Unmodified	_RLRRVIPSRVV_					0	0	0		tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9819824099541	4	338.475569	1349.87317	0.15816	5.3533E-05	3.4156	0.0011561	3.5737	0.0012096	338.72708520777553	26.294	0.36765	28.041	27.912	28.279	1.747					15	11	2	0	0	0	0.14606	1	10973	10973		0.50596	0.051438	1	1345000			28972	16300	14329	14388	33256	33256					0.21222911144559475
RLRRVIPSRVV	11	Unmodified	_RLRRVIPSRVV_					0	0	0		tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	338.475569	1349.87317	-0.087616	-2.9656E-05	6.1811	0.0020922	6.0935	0.0020625	338.47797281834187	26.793	0.18005	28.064	27.994	28.174	1.2715	0.011586	0.0027265	NaN	0.50596	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1116300			28973	16300	14329	14388							0.21222911144559475
RLRSLLHF	8	Unmodified	_RLRSLLHF_					0	0	0			REV__ENST00000587864.1_1_17:74057571-74060203:-|nuORF	REV__ENST00000587864.1_1_17:74057571-74060203:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	347.5474426150322	3	347.882054	1040.62433	0.70859	0.00024651	-1.2176	-0.0004236	-0.50905	-0.00017709	347.88166778293004	42.112	0.31031	43.452	43.26	43.571	1.3399					14	9	2	0	0	0	2.3239	1	17679	17679		3.9444	0.3479	1	1683200	+		28974	10884	14330	14389	33257	33257					0.10564567907886158
RLRYLLYFVFI	11	Unmodified	_RLRYLLYFVFI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	751.9521362185478	2	751.947747	1501.88094	2.6108	0.0019632	-0.16823	-0.0001265	2.4425	0.0018367	751.9476912036323	90.466	1.1751	90.675	90.114	91.289	0.20903					53	36	2	0	0	0	1.0405	1	37977	37977		0	0	1	745380	+		28975	15042	14331	14390	33258	33258					0.15007625621478837
RLRYLLYFVFI	11	Unmodified	_RLRYLLYFVFI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	751.947747	1501.88094	2.3551	0.0017709	-0.019382	-1.4574E-05	2.3357	0.0017563	751.9475274893957	90.759	1.0289	90.759	90.065	91.094	0	-0.062273	-0.00016918	NaN	0	55	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	744790	+		28976	15042	14331	14390							0.15007625621478837
RLRYLLYFVFI	11	Unmodified	_RLRYLLYFVFI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	751.947747	1501.88094	2.6108	0.0019632	-0.16823	-0.0001265	2.4425	0.0018367	751.9476912036323	90.466	1.1751	90.675	90.114	91.289	0.20903	-0.14583	-0.00039304	NaN	0	53	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745380	+		28977	15042	14331	14390							0.15007625621478837
RLRYLLYFVFI	11	Unmodified	_RLRYLLYFVFI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	751.947747	1501.88094	4.1834	0.0031457	2.0946	0.001575	6.278	0.0047207	751.9496541119846	89.848	0.28244	90.868	90.739	91.022	1.0199	0.047283	0.00301	NaN	0	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	846010	+		28978	15042	14331	14390							0.15007625621478837
RLRYLLYFVFI	11	Unmodified	_RLRYLLYFVFI_					0	0	0			REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	REV__tr|A0A553SN20|A0A553SN20_NIACIDUF2157domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23520PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	751.947747	1501.88094	3.919	0.0029469	-0.10615	-7.9821E-05	3.8128	0.0028671	751.9471455364034	89.577	0.53748	90.982	90.798	91.335	1.4045	0.16082	-0.00029968	NaN	0	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	704010	+		28979	15042	14331	14390							0.15007625621478837
RLSEFIPAVF	10	Unmodified	_RLSEFIPAVF_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5;ENST00000523397.1_1_8:126095350-126096053:-|nuORF	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.8333007693291	2	589.832049	1177.64954	1.9989	0.001179	1.9084	0.0011256	3.9073	0.0023047	589.8335534405785	74.099	0.57238	74.099	73.827	74.399	0					42	17	3	0	0	0	0.50772	3	30872	30826;30872;30928		27.223	12.385	1	2361700			28980	3809	14332	14391	33259;33260;33261	33260					0.06782577919784671
RLSEFIPAVF	10	Unmodified	_RLSEFIPAVF_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5;ENST00000523397.1_1_8:126095350-126096053:-|nuORF	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.8364745974541	2	589.832049	1177.64954	2.2013	0.0012984	2.5035	0.0014766	4.7047	0.002775	589.8334786229647	73.56	0.53266	73.884	73.605	74.138	0.32494					48	16	4	0	0	0	0.28421	2	30736	30736;30789		40.239	18.493	1	2541300			28981	3809	14332	14391	33262;33263	33262					0.06782577919784671
RLSEFIPAVF	10	Unmodified	_RLSEFIPAVF_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5;ENST00000523397.1_1_8:126095350-126096053:-|nuORF	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.8326904177666	2	589.832049	1177.64954	2.7752	0.0016369	-0.44151	-0.00026041	2.3337	0.0013765	589.831880331201	72.387	0.74042	73.717	73.423	74.164	1.3297					43	23	2	0	0	0	0.21129	4	30371	30323;30371;30423;30479		47.594	27.18	1	11825000			28982	3809	14332	14391	33264;33265;33266;33267	33265					0.06782577919784671
RLSEFIPAVF	10	Unmodified	_RLSEFIPAVF_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5;ENST00000523397.1_1_8:126095350-126096053:-|nuORF	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.8326293826103	2	589.832049	1177.64954	2.5687	0.0015151	-0.36768	-0.00021687	2.201	0.0012982	589.8319181393734	71.947	0.70595	73.771	73.445	74.151	1.824					40	22	2	0	0	0	0.14781	3	30150	30102;30150;30201		55.503	35.088	1	14667000			28983	3809	14332	14391	33268;33269;33270	33269					0.06782577919784671
RLSQLRRYFIY	11	Unmodified	_RLSQLRRYFIY_					0	0	0			REV__nc|ENSG00000135436|Q8IYM0-2|FAM186B	REV__nc|ENSG00000135436|Q8IYM0-2|FAM186B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	760.9393188357353	2	757.93316	1513.85177	2.3035	0.0017459	-0.17614	-0.0001335	2.1274	0.0016124	758.4352349575831	85.658	1.3702	86.785	86.27	87.641	1.1265					349	55	7	0	0	0	1.0395	1	36094	36094		0.30703	0	1	552680000	+		28984	9941	14333	14392	33271	33271					0.11539481325235101
RLSTRNGV	8	Unmodified	_RLSTRNGV_					0	0	0			REV__ENSG00000117069|ENST00000477717|ST6GALNAC5	REV__ENSG00000117069|ENST00000477717|ST6GALNAC5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1653320193291	3	301.510397	901.509363	-2.3408	-0.00070579	2.6759	0.00080682	0.33508	0.00010103	301.51131623967314	95.536	0.2605	95.536	95.401	95.662	0					11	8	2	0	0	0	2.3239	1	39951	39951		1.6526	0.17072	1	288660	+		28985	9490	14334	14393	33272	33272					0.054668387060814894
RLTDYVAFL	9	Unmodified	_RLTDYVAFL_					0	0	0		ENST00000465362.1_1_2:238005439-238006382:+|nuORF;nc|ENSG00000198612|Q99627-2|COPS8;ENSG00000198612|ENST00000354371|COPS8	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.3043090701103	2	549.303124	1096.5917	1.907	0.0010475	3.7877	0.0020806	5.6947	0.0031281	549.3035087289288	68.138	0.61351	69.516	69.303	69.916	1.3778					48	19	3	0	0	0	0.079895	1	28566	28566		56.177	16.227	1	9025700			28986	5060	14335	14394	33273	33273					0.04726315994366814
RLTDYVAFL	9	Unmodified	_RLTDYVAFL_					0	0	0		ENST00000465362.1_1_2:238005439-238006382:+|nuORF;nc|ENSG00000198612|Q99627-2|COPS8;ENSG00000198612|ENST00000354371|COPS8	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.3046142458916	2	549.303124	1096.5917	1.644	0.00090306	2.2521	0.0012371	3.8961	0.0021401	549.3031475182378	67.604	0.55859	69.474	69.268	69.827	1.87					35	17	3	0	0	0	0.1388	2	28316	28316;28366		39.95	7.164	1	7803600			28987	5060	14335	14394	33274;33275	33274					0.04726315994366814
RLTDYVAFL	9	Unmodified	_RLTDYVAFL_					0	0	0		ENST00000465362.1_1_2:238005439-238006382:+|nuORF;nc|ENSG00000198612|Q99627-2|COPS8;ENSG00000198612|ENST00000354371|COPS8	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	549.303124	1096.5917	1.2236	0.00067215	1.1202	0.00061532	2.3438	0.0012875	549.3035512916945	69.773	0.41386	69.773	69.579	69.993	0	0.18854	-0.00024516	NaN	56.177	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2006500			28988	5060	14335	14394							0.04726315994366814
RLTDYVAFL	9	Unmodified	_RLTDYVAFL_					0	0	0		ENST00000465362.1_1_2:238005439-238006382:+|nuORF;nc|ENSG00000198612|Q99627-2|COPS8;ENSG00000198612|ENST00000354371|COPS8	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	ENST00000465362.1_1_2:238005439-238006382:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.303124	1096.5917	1.3847	0.00076061	0.80753	0.00044358	2.1922	0.0012042	549.30384470182	69.252	0.37668	69.574	69.344	69.721	0.32223	-0.0099856	-0.00058865	NaN	56.177	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2716200			28989	5060	14335	14394							0.04726315994366814
RLTLTHVK	8	Unmodified	_RLTLTHVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_01	1	323.2066833376884	3	323.206426	966.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.569	1	63.569	63.069	64.069	0								0	0	0	1.0178	1	26501	26501		3.5965	0.60125	1		+		28990	10496	14336	14395	33276	33276					0.11281459296708363
RLTNRTYRKRI	11	Unmodified	_RLTNRTYRKRI_					0	0	0		ENSG00000007384|ENST00000262316|RHBDF1	ENSG00000007384|ENST00000262316|RHBDF1	ENSG00000007384|ENST00000262316|RHBDF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.9709045290947	3	492.967181	1475.87971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.821	1	89.821	89.321	90.321	0								0	0	0	0.63775	1	37543	37543		0.073264	0	1				28991	520	14337	14396	33277	33277					0.1608080430528389
RLTPKLMEV	9	Unmodified	_RLTPKLMEV_					0	0	0		NCOA2-EIF3H|1|fusion;RAD21-EIF3H|1|fusion;ENSG00000147677|ENST00000521861|EIF3H;RAD21-EIF3H|3|fusion;RAD21-EIF3H|2|fusion;RAD21-EIF3H|4|fusion	NCOA2-EIF3H|1|fusion	NCOA2-EIF3H|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8236572146416	2	543.820627	1085.6267	0.77063	0.00041909	1.9434	0.0010569	2.714	0.0014759	543.8214499085669	30.007	0.42922	31.289	30.98	31.409	1.2825					23	13	3	0	0	0	0.1388	2	12581	12581;12632		39.95	15.929	1	1029600			28992	8034	14338	14397	33278;33279	33278					0.08731235530672166
RLTPKLMEV	9	Unmodified	_RLTPKLMEV_					0	0	0		NCOA2-EIF3H|1|fusion;RAD21-EIF3H|1|fusion;ENSG00000147677|ENST00000521861|EIF3H;RAD21-EIF3H|3|fusion;RAD21-EIF3H|2|fusion;RAD21-EIF3H|4|fusion	NCOA2-EIF3H|1|fusion	NCOA2-EIF3H|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8223754763603	2	543.820627	1085.6267	0.80914	0.00044003	0.26431	0.00014374	1.0734	0.00058376	543.820636634201	29.572	0.57765	31.371	30.868	31.446	1.7987					25	18	2	0	0	0	0.24056	1	12394	12394		28.495	13.656	1	945830			28993	8034	14338	14397	33280	33280					0.08731235530672166
RLTPKLMEV	9	Unmodified	_RLTPKLMEV_					0	0	0		NCOA2-EIF3H|1|fusion;RAD21-EIF3H|1|fusion;ENSG00000147677|ENST00000521861|EIF3H;RAD21-EIF3H|3|fusion;RAD21-EIF3H|2|fusion;RAD21-EIF3H|4|fusion	NCOA2-EIF3H|1|fusion	NCOA2-EIF3H|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	543.820627	1085.6267	1.2048	0.00065518	2.0492	0.0011144	3.2539	0.0017696	543.8211906161944	31.347	0.24444	31.638	31.508	31.753	0.29086	0.20538	0.0007128	NaN	39.95	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196400			28994	8034	14338	14397							0.08731235530672166
RLVCLRWKELV	11	Unmodified	_RLVCLRWKELV_					0	0	0		ENSG00000116661|ENST00000354287|FBXO2;ENST00000471501.1_1_1:11709834-11710766:-|nuORF;ENST00000466919.1_1_1:11710000-11714093:-|nuORF	ENSG00000116661|ENST00000354287|FBXO2	ENSG00000116661|ENST00000354287|FBXO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2859985232353	3	472.28323	1413.82786	3.3354	0.0015752	0.53056	0.00025058	3.8659	0.0018258	472.28333069559534	87.104	1.4196	87.348	87.22	88.64	0.24387					116	47	3	0	0	0	1.039	1	36646	36646		0.45452	0	1	4354100			28995	1976	14339	14398	33281	33281					0.13749924567173366
RLVGRLTNRI	10	Unmodified	_RLVGRLTNRI_					0	0	0		ENST00000372189.7_1_9:134453434-134453743:-|nuORF	ENST00000372189.7_1_9:134453434-134453743:-|nuORF	ENST00000372189.7_1_9:134453434-134453743:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.9234191775322	3	399.922801	1196.74657	4.485	0.0017936	-2.0391	-0.0008155	2.4458	0.00097815	399.9220334010135	89.353	0.56226	90.757	90.456	91.019	1.4045					49	17	4	0	0	0	0.88314	1	37586	37586		3.3196	1.7274	1	6213100			28996	6136	14340	14399	33282	33282					0.15606984919440947
RLVPAAAR	8	Unmodified	_RLVPAAAR_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2718688845634	2	427.271961	852.52937	3.2868	0.0014044	-4.0943	-0.0017494	-0.8075	-0.00034502	427.27030613328816	96.561	0.15523	96.867	96.789	96.944	0.3062					11	4	3	0	0	0	0.89051	1	40625	40625		2.3027	0	1	3811200			28997	3073	14341	14400	33283	33283					0.09720634436689579
RLVPAAAR	8	Unmodified	_RLVPAAAR_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	427.271961	852.52937	0.71826	0.00030689	-4.0019	-0.0017099	-3.2836	-0.001403	427.27041078932984	97.128	0.17738	97.128	97.08	97.258	0	0.11928	0.00035405	NaN	2.3027	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	774230			28998	3073	14341	14400							0.09720634436689579
RLVPAAAR	8	Unmodified	_RLVPAAAR_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	427.271961	852.52937	3.8456	0.0016431	-5.2206	-0.0022306	-1.3751	-0.00058752	427.2693184016193	96.747	0.30121	97.031	96.892	97.194	0.28442	0.022292	-0.0006874	NaN	2.3027	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5071400			28999	3073	14341	14400							0.09720634436689579
RLVPRAVLN	9	Unmodified	_RLVPRAVLN_					0	0	0		ENST00000535366.5_1_12:7031292-7031564:+|nuORF	ENST00000535366.5_1_12:7031292-7031564:+|nuORF	ENST00000535366.5_1_12:7031292-7031564:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	346.5594055056572	3	346.557459	1036.65055	1.4042	0.00048663	3.5138	0.0012177	4.918	0.0017044	346.5582543349455	67.054	0.55699	67.377	67.126	67.683	0.32269					34	18	2	0	0	0	0.81521	1	28005	28005		2.7352	0	1	3333000			29000	7197	14342	14401	33284	33284					0.13368837079360674
RLVQLLFH	8	Unmodified	_RLVQLLFH_					0	0	0			REV__ENST00000412733.1_X:151869075-151869150:+|nuORF	REV__ENST00000412733.1_X:151869075-151869150:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.5475646853447	3	342.546671	1024.61818	-0.57422	-0.0001967	2.7578	0.00094467	2.1836	0.00074797	342.5473478627651	31.536	0.76387	32.818	32.438	33.202	1.2813					58	24	3	0	0	0	0.89008	1	13155	13155		1.6526	0	1	2695500	+		29001	12926	14343	14402	33285	33285					0.10686049676382936
RLVRREPVTV	10	Unmodified	_RLVRREPVTV_					0	0	0			REV__nc|ENSG00000164509|Q8NI17-8|IL31RA	REV__nc|ENSG00000164509|Q8NI17-8|IL31RA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.9229308962822	3	408.922689	1223.74624	0.74148	0.00030321	-0.84311	-0.00034477	-0.10163	-4.1557E-05	408.9223501836721	92.462	0.54696	92.462	92.197	92.744	0					61	17	5	0	0	0	0.89803	1	38612	38612		0.69767	0	1	35869000	+		29002	14473	14344	14403	33286	33286					0.14331565199586294
RLVRTAHRK	9	Unmodified	_RLVRTAHRK_					0	0	0		ENST00000231061.8_1_5:151066549-151066705:-|nuORF	ENST00000231061.8_1_5:151066549-151066705:-|nuORF	ENST00000231061.8_1_5:151066549-151066705:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	380.2295715212822	3	379.575624	1135.70504	4.6963	0.0017826	-1.4148	-0.00053703	3.2815	0.0012456	379.57485458811345	88.286	0.38568	89.343	89.08	89.466	1.0562					18	11	2	0	0	0	0.11954	1	37131	37131		0.26902	0	1	309750			29003	5549	14345	14404	33287	33287					0.1426184895078677
RLVRTNPPL	9	Unmodified	_RLVRTNPPL_					0	0	0			REV__ENSG00000104524|ENST00000495276|PYCR3	REV__ENSG00000104524|ENST00000495276|PYCR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3303710818291	2	533.330008	1064.64546	3.2267	0.0017209	-2.2996	-0.0012265	0.92704	0.00049442	533.3281389248502	106.05	0.11016	106.2	106.14	106.25	0.15781					15	5	3	0	0	0	0.83213	1	45320	45320		2.0598	0	1	53829000	+		29004	9137	14346	14405	33288	33288					0.11572533216735792
RLVVRRLGRWI	11	Unmodified	_RLVVRRLGRWI_					0	0	0		ENST00000265748.6_2_7:36429459-36435956:+|nuORF	ENST00000265748.6_2_7:36429459-36435956:+|nuORF	ENST00000265748.6_2_7:36429459-36435956:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	356.2804443240166	4	356.733478	1422.90481	1.6086	0.00057384	-3.2315	-0.0011528	-1.6229	-0.00057894	356.73256041266	62.362	0.77739	62.692	62.041	62.819	0.32974					28	24	2	0	0	0	0.14606	1	26039	26039		1.3296	0.87513	1	661370			29005	5657	14347	14406	33289	33289					0.21026903898541605
RLWEYLLEL	9	Unmodified	_RLWEYLLEL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	617.8456298708916	2	617.845156	1233.67576	2.4708	0.0015265	-0.25376	-0.00015678	2.217	0.0013698	617.8447871437907	85.758	0.76493	86.011	85.82	86.585	0.25227					42	24	3	0	0	0	0.33297	2	35876	35876;35939		23.79	4.5328	1	594630			29006	1912	14348	14407	33290;33291	33290					0.06826847091269883
RLWEYLLEL	9	Unmodified	_RLWEYLLEL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.8486205935478	2	617.845156	1233.67576	1.9552	0.001208	1.864	0.0011517	3.8191	0.0023596	617.846348563313	84.867	0.63611	86.026	85.782	86.418	1.159					49	20	3	0	0	0	0.099302	3	35624	35577;35624;35676		49.554	16.769	1	2819200			29007	1912	14348	14407	33292;33293;33294	33293					0.06826847091269883
RLWEYLLEL	9	Unmodified	_RLWEYLLEL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8466064333916	2	617.845156	1233.67576	2.1172	0.0013081	1.3428	0.00082965	3.46	0.0021377	617.846346366914	84.341	0.7255	85.937	85.675	86.401	1.5962					53	23	3	0	0	0	0.081597	4	35343	35343;35384;35425;35485		55.503	25.662	1	2371300			29008	1912	14348	14407	33295;33296;33297;33298	33295					0.06826847091269883
RLWFPWAS	8	Unmodified	_RLWFPWAS_					0	0	0		ENST00000583777.5_1_22:43547558-43557149:+|nuORF	ENST00000583777.5_1_22:43547558-43557149:+|nuORF	ENST00000583777.5_1_22:43547558-43557149:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0703307986259	3	354.855505	1061.54469	0.83915	0.00029778	2.575	0.00091377	3.4142	0.0012115	355.19080001838995	69.321	0.40836	70.687	70.53	70.939	1.3657					24	13	2	0	0	0	2.3239	1	29182	29182		1.4819	0.28856	1	4034000			29009	7442	14349	14408	33299	33299					0.016375012338812667
RLWGEPVNL	9	Unmodified	_RLWGEPVNL_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3013793826103	2	542.300916	1082.58728	1.7738	0.00096194	0.30023	0.00016281	2.074	0.0011248	542.3009626197548	51.995	0.69077	51.995	51.756	52.447	0					45	21	3	0	0	0	0.099302	3	21716	21615;21663;21716		49.554	21.925	1	2321500			29010	1860	14350	14409	33300;33301;33302	33302					0.04928851571457926
RLWGEPVNL	9	Unmodified	_RLWGEPVNL_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3019897341728	2	542.300916	1082.58728	1.7288	0.00093751	0.52991	0.00028737	2.2587	0.0012249	542.3010567629958	51.482	0.58951	51.807	51.539	52.128	0.32554					40	18	3	0	0	0	0.060242	3	21554	21510;21554;21595		63.961	31.175	1	3636600			29011	1860	14350	14409	33303;33304;33305	33304					0.04928851571457926
RLWGEPVNL	9	Unmodified	_RLWGEPVNL_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3026000857353	2	542.300916	1082.58728	2.7014	0.001465	0.091529	4.9636E-05	2.7929	0.0015146	542.3008134863294	50.202	0.56606	51.593	51.355	51.921	1.3911					32	17	3	0	0	0	0.040497	3	21002	20954;21002;21043		75.761	35.82	1	7908700			29012	1860	14350	14409	33306;33307;33308	33307					0.04928851571457926
RLWGEPVNL	9	Unmodified	_RLWGEPVNL_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;nc|ENSG00000114374|O00507-2|USP9Y;ENST00000426564.6_1_Y:14821380-14953057:+|nuORF;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3022338747978	2	542.300916	1082.58728	1.7295	0.00093793	0.69107	0.00037477	2.4206	0.0013127	542.3009535034837	49.574	0.59764	51.551	51.349	51.946	1.9772					35	18	3	0	0	0	0.043696	2	20785	20732;20785		72.968	33.018	1	6324300			29013	1860	14350	14409	33309;33310	33310					0.04928851571457926
RLWGQQPLRQ	10	Unmodified	_RLWGQQPLRQ_					0	0	0		ENST00000444874.5_1_7:99950069-99950487:+|nuORF;ENST00000310771.8_1_7:99949952-99950487:+|nuORF;ENST00000451963.1_2_7:99817502-99818037:+|nuORF	ENST00000444874.5_1_7:99950069-99950487:+|nuORF	ENST00000444874.5_1_7:99950069-99950487:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	641.3657714724541	2	641.36237	1280.71019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.07	1	108.23	107.73	108.73	0.15781								0	0	0	0.6624	1	46643	46643		0.40072	0.050084	1				29014	5803	14351	14410	33311	33311					0.08106108022730041
RLWIRPSPSR	10	Unmodified	_RLWIRPSPSR_					0	0	0			REV__chr1:12115729-12123284|327|10.53|0.47|4.48|+|0|TNFRSF8,TNFRSF8|1	REV__chr1:12115729-12123284|327|10.53|0.47|4.48|+|0|TNFRSF8,TNFRSF8|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2526122927666	3	423.250918	1266.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.67	1	117.67	117.17	118.17	0								0	0	0	0.6607	1	50728	50728		1.5923	0.89462	1		+		29015	8206	14352	14411	33312	33312					0.108226984023986
RLWKRRWFVLS	11	Unmodified	_RLWKRRWFVLS_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;PLEKHA4|p.R615Pfs*17|1|0.33|ENSG00000105559|chr19:48841210-48841211|-/G|frameshift_variant;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3120605349541	3	516.308767	1545.90447	2.2707	0.0011724	3.3323	0.0017205	5.603	0.0028929	516.3111675084066	92.397	1.634	92.397	91.693	93.327	0					107	52	3	0	0	0	1.0402	1	38525	38525		0.094841	0.011491	1	1669800			29016	1525	14353	14412	33313	33313					0.15335484178672232
RLWKRRWFVLS	11	Unmodified	_RLWKRRWFVLS_					0	0	0		nc|ENSG00000105559|Q9H4M7-2|PLEKHA4;PLEKHA4|p.R615Pfs*17|1|0.33|ENSG00000105559|chr19:48841210-48841211|-/G|frameshift_variant;ENSG00000105559|ENST00000263265|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	nc|ENSG00000105559|Q9H4M7-2|PLEKHA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.6452514529228	3	516.308767	1545.90447	3.575	0.0018458	3.0534	0.0015765	6.6284	0.0034223	516.6439721986528	91.359	0.94138	92.725	92.342	93.284	1.366					62	29	3	0	0	0	1.0393	1	38497	38497		0.36667	0.27183	1	1756200			29017	1525	14353	14412	33314	33314					0.15335484178672232
RLWLRRPSRS	10	Unmodified	_RLWLRRPSRS_					0	0	0		chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8973876833916	2	663.896912	1325.77927	2.3028	0.0015288	-1.3581	-0.00090165	0.94472	0.00062719	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	0.89803	1	35000	35000		1.4819	0.15237	1	5935800			29018	218	14354	14413	33315	33315					0.12941192042285365
RLWTEIPTAI	10	Unmodified	_RLWTEIPTAI_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ITPR3|p.S1341Vfs*44|1|0.09|ENSG00000096433|chr6:33679929-33679930|-/G|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3433105349541	2	600.342781	1198.67101	2.3952	0.001438	-1.0089	-0.00060566	1.3864	0.0008323	600.3420180104922	63.288	0.22197	63.288	63.176	63.398	0					9	6	2	0	0	0	0.28905	1	26407	26407		39.95	13.682	1	451180			29019	1195	14355	14414	33316	33316					0.07961962948502332
RLWTEIPTAI	10	Unmodified	_RLWTEIPTAI_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ITPR3|p.S1341Vfs*44|1|0.09|ENSG00000096433|chr6:33679929-33679930|-/G|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	600.3441650271416	2	600.342781	1198.67101	1.7833	0.0010706	0.0064199	3.8541E-06	1.7898	0.0010745	600.3429280906643	62.733	0.18569	63.063	62.975	63.161	0.32974					9	5	2	0	0	0	0.55653	1	26301	26301		24.991	2.3329	1	573150			29020	1195	14355	14414	33317	33317					0.07961962948502332
RLWTEIPTAI	10	Unmodified	_RLWTEIPTAI_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ITPR3|p.S1341Vfs*44|1|0.09|ENSG00000096433|chr6:33679929-33679930|-/G|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8473998904228	2	600.342781	1198.67101	3.0317	0.0018201	1.252	0.00075162	4.2837	0.0025717	600.3434785023966	61.432	0.30568	62.849	62.714	63.02	1.4177					22	9	3	0	0	0	0.34658	2	25750	25750;25800		36.506	8.0117	1	1893500			29021	1195	14355	14414	33318;33319	33318					0.07961962948502332
RLWTEIPTAI	10	Unmodified	_RLWTEIPTAI_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant;ITPR3|p.S1341Vfs*44|1|0.09|ENSG00000096433|chr6:33679929-33679930|-/G|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3455688357353	2	600.342781	1198.67101	2.8774	0.0017274	0.34752	0.00020863	3.2249	0.0019361	600.3430319667799	60.879	0.27499	62.844	62.729	63.004	1.9653					19	8	3	0	0	0	0.2264	2	25550	25550;25606		45.74	16.658	1	1654400			29022	1195	14355	14414	33320;33321	33320					0.07961962948502332
RLYILLPL	8	Unmodified	_RLYILLPL_					0	0	0		ENST00000509573.5_1_5:138855949-138860944:-|nuORF;ENST00000507297.5_1_5:138855848-138858268:-|nuORF;ENSG00000184584|ENST00000330794|STING1	ENST00000509573.5_1_5:138855949-138860944:-|nuORF	ENST00000509573.5_1_5:138855949-138860944:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.2247497439384	3	334.223306	999.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.63	1	101.82	101.32	102.32	0.19076								0	0	0	1.0178	1	42730	42730		0.40072	0	1				29023	4697	14356	14415	33322	33322					0.1482498862170587
RLYMSWLP	8	Unmodified	_RLYMSWLP_					0	0	0		ENST00000309993.2_1_3:135870136-135870256:-|nuORF	ENST00000309993.2_1_3:135870136-135870256:-|nuORF	ENST00000309993.2_1_3:135870136-135870256:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0696288943291	3	355.856517	1064.54772	1.0052	0.00035771	1.9099	0.00067967	2.9152	0.0010374	355.8579477773039	68.81	0.47837	70.663	70.409	70.887	1.853					47	15	4	0	0	0	2.3239	1	28828	28828		3.9444	0	1	3584500			29024	5796	14357	14416	33323	33323					0.018030082964060057
RLYPEGLAQL	10	Unmodified	_RLYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.3322631716728	2	580.327131	1158.63971	1.6113	0.00093508	2.1434	0.0012439	3.7547	0.002179	580.3288497909282	50.398	0.25044	50.727	50.574	50.825	0.32824					12	7	2	0	0	0	0.70123	1	21118	21118		18.373	3.5348	1	639880			29025	3540	14358	14417	33324	33324					0.0667338991440829
RLYPEGLAQL	10	Unmodified	_RLYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3300048708916	2	580.327131	1158.63971	1.5927	0.00092428	1.9495	0.0011314	3.5422	0.0020556	580.3284192168078	49.136	0.34378	50.527	50.359	50.703	1.3906					23	10	3	0	0	0	0.70123	1	20605	20605		18.373	4.467	1	1084600			29026	3540	14358	14417	33325	33325					0.0667338991440829
RLYPEGLAQL	10	Unmodified	_RLYPEGLAQL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENST00000563305.1_1_16:67472744-67473248:-|nuORF	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3296996951103	2	580.327131	1158.63971	1.9507	0.001132	0.69651	0.0004042	2.6472	0.0015362	580.3276092129389	48.594	0.37111	50.571	50.39	50.761	1.9772					21	11	3	0	0	0	0.55892	1	20345	20345		24.882	6.7352	1	1213300			29027	3540	14358	14417	33326	33326					0.0667338991440829
RLYPWGVVEV	10	Unmodified	_RLYPWGVVEV_					0	0	0		ENST00000481500.1_1_2:242277175-242285749:+|nuORF;ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	609.3384277224541	2	609.337498	1216.66044	2.1877	0.0013331	0.62666	0.00038184	2.8144	0.0017149	609.3378005084979	64.958	0.47411	64.958	64.753	65.227	0					34	14	3	0	0	0	0.24244	2	27107	27055;27107		43.772	18.373	1	2104300			29028	4032	14359	14418	33327;33328	33328					0.06077980294094232
RLYPWGVVEV	10	Unmodified	_RLYPWGVVEV_					0	0	0		ENST00000481500.1_1_2:242277175-242285749:+|nuORF;ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	609.3400146365166	2	609.337498	1216.66044	1.8073	0.0011013	1.6672	0.0010159	3.4746	0.0021172	609.3381995838125	64.391	0.44951	64.72	64.529	64.979	0.32899					32	13	3	0	0	0	0.22673	3	26984	26938;26984;27030		45.7	22.963	1	2474400			29029	4032	14359	14418	33329;33330;33331	33330					0.06077980294094232
RLYPWGVVEV	10	Unmodified	_RLYPWGVVEV_					0	0	0		ENST00000481500.1_1_2:242277175-242285749:+|nuORF;ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.3389160037041	2	609.337498	1216.66044	2.8373	0.0017289	1.6077	0.00097966	4.4451	0.0027086	609.3384151048044	63.103	0.5909	64.516	64.254	64.845	1.4134					49	18	4	0	0	0	0.1353	3	26472	26427;26472;26527		57.722	25.416	1	5200000			29030	4032	14359	14418	33332;33333;33334	33333					0.06077980294094232
RLYPWGVVEV	10	Unmodified	_RLYPWGVVEV_					0	0	0		ENST00000481500.1_1_2:242277175-242285749:+|nuORF;ENSG00000168385|ENST00000391971|SEPTIN2;nc|ENSG00000168385|Q15019-3|SEPTIN2;nc|ENSG00000168385|Q15019-2|SEPTIN2	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	ENST00000481500.1_1_2:242277175-242285749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.3387939333916	2	609.337498	1216.66044	2.8198	0.0017182	1.7156	0.0010454	4.5354	0.0027636	609.3385007975462	62.478	0.6183	64.423	64.195	64.814	1.9444					47	19	4	0	0	0	0.048317	3	26247	26200;26247;26287		85.642	45.684	1	5506200			29031	4032	14359	14418	33335;33336;33337	33336					0.06077980294094232
RLYTEPLLV	9	Unmodified	_RLYTEPLLV_					0	0	0		nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3275024294853	2	552.326599	1102.63865	1.4908	0.00082343	-0.52097	-0.00028775	0.96987	0.00053569	552.3260779595439	50.717	0.33234	52.111	51.894	52.226	1.3938					27	10	3	0	0	0	0.086433	1	21239	21239		53.833	7.8118	1	5175300			29032	2210	14360	14419	33338	33338					0.09143175545523263
RLYTEPLLV	9	Unmodified	_RLYTEPLLV_					0	0	0		nc|ENSG00000124155|Q969N2-3|PIGT;nc|ENSG00000124155|Q969N2-2|PIGT;nc|ENSG00000124155|Q969N2-4|PIGT;nc|ENSG00000124155|Q969N2-6|PIGT;nc|ENSG00000124155|Q969N2-5|PIGT;ENSG00000124155|ENST00000279036|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	nc|ENSG00000124155|Q969N2-3|PIGT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3280517458916	2	552.326599	1102.63865	1.539	0.00085005	0.12414	6.8564E-05	1.6632	0.00091861	552.3264276949577	50.127	0.36693	52.104	51.883	52.25	1.9772					26	11	3	0	0	0	0.15456	1	21002	21002		38.176	5.3899	1	4678400			29033	2210	14360	14419	33339	33339					0.09143175545523263
RLYYYRDRDWR	11	Unmodified	_RLYYYRDRDWR_					0	0	0		ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	555.2438842654228	3	554.614696	1660.82226	0.9302	0.0005159	-0.20952	-0.0001162	0.72068	0.0003997	554.9489012558095	28.282	0.21011	29.561	29.396	29.606	1.2789					9	6	2	0	0	0	0.14606	1	11823	11823		0	0	1	371680			29034	5357	14361	14420	33340	33340					0.018279173090604672
RLYYYRDRDWR	11	Unmodified	_RLYYYRDRDWR_					0	0	0		ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	554.614696	1660.82226	0.64723	0.00035896	1.6861	0.00093515	2.3334	0.0012941	554.616363038264	27.752	0.18585	29.527	29.385	29.571	1.7754	-0.016797	0.0026317	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200070			29035	5357	14361	14420							0.018279173090604672
RMDYPVFTV	9	Unmodified	_RMDYPVFTV_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.2820312380791	2	564.281334	1126.54812	1.4769	0.00083337	1.111	0.00062693	2.5879	0.0014603	564.2812229982767	56.527	0.29311	56.527	56.399	56.693	0					14	9	2	0	0	0	0.48482	1	23572	23572		16.149	3.6176	1	941730			29036	1151	14362	14421	33341	33341					-0.01009616774422284
RMDYPVFTV	9	Unmodified	_RMDYPVFTV_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7854492068291	2	564.281334	1126.54812	1.6564	0.00093467	0.61803	0.00034874	2.2744	0.0012834	564.2811539009992	54.798	0.42124	56.203	55.964	56.385	1.4048					30	13	3	0	0	0	0.19659	2	22901	22901;22955		33.445	10.709	1	2545400			29037	1151	14362	14421	33342;33343	33342					-0.01009616774422284
RMDYPVFTV	9	Unmodified	_RMDYPVFTV_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	564.281334	1126.54812	2.002	0.0011297	-0.75385	-0.00042539	1.2481	0.0007043	564.2804815396423	54.339	0.40245	56.308	56.064	56.467	1.9684	-0.038318	-0.00087504	NaN	33.445	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1943300			29038	1151	14362	14421							-0.01009616774422284
RMEGRHCC	8	Unmodified	_RMEGRHCC_					0	0	0		chr19:19198453-19198657|152|12.42|0.59|4.4|+|1|TE_info:L2b,L2b_dup88571,L2,LINE,donor,-,19198275,19198453|None,RFXANK|2	chr19:19198453-19198657|152|12.42|0.59|4.4|+|1|TE_info:L2b,L2b_dup88571,L2,LINE,donor,-,19198275,19198453|None,RFXANK|2	chr19:19198453-19198657|152|12.42|0.59|4.4|+|1|TE_info:L2b,L2b_dup88571,L2,LINE,donor,-,19198275,19198453|None,RFXANK|2	MSMS	GG20161007_CRH_Patient100_W632_01	3	331.1389648318291	3	331.138813	990.394609	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.267	1	18.165	17.665	18.665	0.89794								0	0	0	1.0178	1	7187	7187		0.45834	0	1				29039	228	14363	14422	33344	33344					-0.10097253363380787
RMFDGKFVV	9	Unmodified	_RMFDGKFVV_					0	0	0		nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.8633605837822	3	366.863672	1097.56919	-0.12648	-4.6401E-05	-1.2092	-0.00044361	-1.3357	-0.00049001	366.86322358904846	37.688	0.21868	38.972	38.894	39.113	1.284					9	6	2	0	0	0	0.37668	1	15820	15820		21.59	13.68	1	518400			29040	3322	14364	14423	33345	33345					0.02430393325107616
RMFDGKFVV	9	Unmodified	_RMFDGKFVV_					0	0	0		nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2183105349541	2	549.791869	1097.56919	0.70073	0.00038525	3.5107	0.0019302	4.2115	0.0023154	550.296858653233	37.09	0.25282	38.91	38.771	39.023	1.8202					14	9	2	0	0	0	0.11275	1	15535	15535		6.2058	0	1	1353900			29041	3322	14364	14423	33346	33346					0.02430393325107616
RMFDGKFVV	9	Unmodified	_RMFDGKFVV_					0	0	0		nc|ENSG00000152332|Q8TAS1-3|UHMK1;ENSG00000152332|ENST00000489294|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	nc|ENSG00000152332|Q8TAS1-3|UHMK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	366.863672	1097.56919	0.40884	0.00014999	-3.7893	-0.0013901	-3.3804	-0.0012402	367.1961472189525	37.057	0.26917	38.876	38.753	39.022	1.819	-0.047678	-0.0017556	NaN	21.59	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	920640			29042	3322	14364	14423							0.02430393325107616
RMGRRSHHHE	10	Unmodified	_RMGRRSHHHE_					0	0	0			REV__ENST00000531107.5_2_11:10648111-10649536:-|nuORF	REV__ENST00000531107.5_2_11:10648111-10649536:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828918337822	3	434.883011	1301.6272	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.44157	1	0.44157	-0.058431	0.94157	0								0	0	0	0.66264	1	180	180		0	0	1		+		29043	13707	14365	14424	33347	33347					-0.011545319769084017
RMHGAWGS	8	Unmodified	_RMHGAWGS_					0	0	0		ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1411620974541	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8764	1	2.999	2.499	3.499	0.12256								0	0	0	1.0178	1	1187	1187		0.40072	0	1				29044	5545	14366	14425	33348	33348					-0.05173034779932095
RMHGAWGS	8	Unmodified	_RMHGAWGS_					0	0	0		ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415588259697	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3514	1	5.4395	4.9395	5.9395	0.08803								0	0	0	1.0178	1	2210	2210		0.40072	0	1				29045	5545	14366	14425	33349	33349					-0.05173034779932095
RMHGAWGS	8	Unmodified	_RMHGAWGS_					0	0	0		ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	ENST00000229340.9_1_12:120533179-120533533:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1418945193291	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2312	1	4.9764	4.4764	5.4764	0.74525								0	0	0	1.0178	1	1752	1752		0.40072	0	1				29046	5545	14366	14425	33350	33350					-0.05173034779932095
RMIMIFLK	8	Unmodified	_RMIMIFLK_					0	0	0		ENST00000399365.7_1_13:33739486-33739534:-|nuORF	ENST00000399365.7_1_13:33739486-33739534:-|nuORF	ENST00000399365.7_1_13:33739486-33739534:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.2092468142509	3	351.210014	1050.60821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.64	1	101.64	101.14	102.14	0								0	0	0	1.0178	1	42560	42560		0.45834	0	1				29047	6335	14367	14426	33351	33351					0.08493402355111357
RMISEAIK	8	Unmodified	_RMISEAIK_					0	0	0		nc|ENSG00000167984|Q7RTR2-4|NLRC3;ENSG00000167984|ENST00000359128|NLRC3;nc|ENSG00000167984|Q7RTR2-2|NLRC3	nc|ENSG00000167984|Q7RTR2-4|NLRC3	nc|ENSG00000167984|Q7RTR2-4|NLRC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	316.5154907107353	3	316.516272	946.526987	-3.5035	-0.0011089	0.16847	5.3323E-05	-3.335	-0.0010556	316.51629767041095	12.494	0.64967	12.494	12.096	12.746	0					35	20	2	0	0	0	0.72752	1	5170	5170		27.629	1.6081	1	2238600			29048	4003	14368	14427	33352	33352					0.051584179167321054
RMKAIEMYFN	10	Unmodified	_RMKAIEMYFN_					0	0	0			REV__ENSG00000146085|ENST00000274813|MMUT	REV__ENSG00000146085|ENST00000274813|MMUT	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8820068240166	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.18	1	111.18	110.68	111.68	0								0	0	0	0.66254	1	48092	48092		0.15932	0	1		+		29049	10293	14369	14428	33353	33353					-0.012699271806695833
RMLGPIYHRPR	11	Unmodified	_RMLGPIYHRPR_					0	0	0			REV__ENST00000377724.7_1_9:37800918-37801074:+|nuORF	REV__ENST00000377724.7_1_9:37800918-37801074:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.3900634646416	2	698.393148	1394.77174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.22	1	101.29	100.79	101.79	0.067009								0	0	0	0.63775	1	42381	42381		1.1933	0.735	1		+		29050	12734	14370	14429	33354	33354					0.09014716450360538
RMMMFRMFK	9	Unmodified	_RMMMFRMFK_					0	0	0			REV__ENSG00000241553|ENST00000397261|ARPC4	REV__ENSG00000241553|ENST00000397261|ARPC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	426.5442382693291	3	426.542782	1276.60652	0.68018	0.00029012	3.1101	0.0013266	3.7903	0.0016167	426.54415016529066	34.552	0.31039	34.552	34.37	34.68	0					20	9	3	0	0	0	0.69306	1	14498	14498		7.609	1.3746	1	1056000	+		29051	11922	14371	14430	33355	33355					-0.020722979968013533
RMNKWSWTTRL	11	Unmodified	_RMNKWSWTTRL_					0	0	0			REV__ENST00000452733.6_1_19:48983037-48983175:+|nuORF	REV__ENST00000452733.6_1_19:48983037-48983175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.5965148806572	3	493.594355	1477.76124	0.75389	0.00037211	2.0427	0.0010083	2.7966	0.0013804	493.5953834705314	19.436	0.28091	20.495	20.322	20.603	1.0585					17	8	3	0	0	0	1.0388	1	8091	8091		0.50596	0.41111	1	543630	+		29052	13146	14372	14431	33356	33356					0.041466890052788585
RMPGNPMLLV	10	Unmodified	_RMPGNPMLLV_					0	0	0			REV__nc|ENSG00000170515|Q9UQ80-2|PA2G4	REV__nc|ENSG00000170515|Q9UQ80-2|PA2G4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.5393859744072	3	376.540312	1126.59911	0.9531	0.00035888	-1.4781	-0.00055656	-0.525	-0.00019768	376.5397355448535	45.849	0.87854	47.225	46.864	47.743	1.3751					49	27	2	0	0	0	0.86043	1	19308	19308		3.0723	0	1	1664800	+		29053	10989	14373	14432	33357	33357					0.04087008998794772
RMRRLHRRTKL	11	Unmodified	_RMRRLHRRTKL_					0	0	0			REV__ENST00000357258.8_2_3:114099156-114099234:-|nuORF	REV__ENST00000357258.8_2_3:114099156-114099234:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	762.3651000857353	2	761.970419	1521.92629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.23	1	100.41	99.907	100.91	0.18047								0	0	0	0.63775	1	42179	42179		1.3295	0.9789	1		+		29054	12560	14374	14433	33358	33358					0.18619965655602755
RMVIKRVV	8	Unmodified	_RMVIKRVV_					0	0	0		ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	500.3270141482353	2	500.826047	999.63754	3.3271	0.0016663	3.1289	0.001567	6.4559	0.0032333	500.8272717678481	106.1	0.14764	106.16	106.06	106.21	0.05455					20	6	4	0	0	0	2.3239	1	45117	45117		0.69038	0	1	76306000			29055	3991	14375	14434	33359	33359					0.1377068269564461
RMVIKRVV	8	Unmodified	_RMVIKRVV_					0	0	0		ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	500.3270446658134	2	500.826047	999.63754	3.0041	0.0015045	1.2903	0.00064621	4.2944	0.0021507	500.82696737624934	106.05	0.25378	106.21	106.11	106.36	0.16174					36	13	4	0	0	0	2.3239	1	45229	45229		0.69038	0	1	350530000			29056	3991	14375	14434	33360	33360					0.1377068269564461
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.2665283083916	2	520.265684	1038.51682	1.0256	0.00053357	0.40839	0.00021247	1.434	0.00074604	520.2664998191998	19.064	0.40185	19.064	18.864	19.266	0					42	12	5	0	0	0	0.31657	2	7948	7899;7948		75.761	10.565	1	18897000	+		29057	11666	14376	14435	33361;33362	33362					-0.0009018980849759828
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.2666503787041	2	520.265684	1038.51682	0.67463	0.00035099	0.45659	0.00023755	1.1312	0.00058853	520.266411948392	18.622	0.36254	18.795	18.602	18.965	0.17286					34	11	4	0	0	0	0.57765	1	7711	7711		49.554	9.597	1	4069800	+		29058	11666	14376	14435	33363	33363					-0.0009018980849759828
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	520.265684	1038.51682	1.0256	0.00053357	0.40839	0.00021247	1.434	0.00074604	520.2664998191998	19.064	0.40185	19.064	18.864	19.266	0	0.21125	0.0002174	NaN	71.922	42	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18897000	+		29059	11666	14376	14435							-0.0009018980849759828
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	520.265684	1038.51682	0.67463	0.00035099	0.45659	0.00023755	1.1312	0.00058853	520.266411948392	18.622	0.36254	18.795	18.602	18.965	0.17286	-0.057744	0.00026756	NaN	71.922	34	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4069800	+		29060	11666	14376	14435							-0.0009018980849759828
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	520.265684	1038.51682	0.67696	0.0003522	-0.44849	-0.00023333	0.22847	0.00011887	520.2661122415275	17.826	0.32871	18.805	18.666	18.995	0.97922	-0.047947	-0.00067421	NaN	71.922	31	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1566100	+		29061	11666	14376	14435							-0.0009018980849759828
RMYEEIAK	8	Unmodified	_RMYEEIAK_					0	0	0			REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	REV__ENST00000479510.2_1_6:33387852-33406697:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	520.265684	1038.51682	0.32661	0.00016992	0.40695	0.00021172	0.73356	0.00038165	520.2662520664103	17.445	0.31704	18.747	18.616	18.933	1.3023	-0.10556	0.00021591	NaN	71.922	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1362600	+		29062	11666	14376	14435							-0.0009018980849759828
RNAKAGKK	8	Unmodified	_RNAKAGKK_					0	0	0		ENST00000430904.1_1_2:197127801-197127870:+|nuORF	ENST00000430904.1_1_2:197127801-197127870:+|nuORF	ENST00000430904.1_1_2:197127801-197127870:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7758972048759	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89176	1	30717	30717		0.79363	0	1	532050000			29063	6498	14377	14436	33364	33364					0.09427732948370249
RNALALIRQT	10	Unmodified	_RNALALIRQT_					0	0	0			REV__ENSG00000144230|ENST00000486700|GPR17	REV__ENSG00000144230|ENST00000486700|GPR17	MSMS	GG20161007_CRH_Patient100_W632_01	3	578.3521606326103	2	578.351471	1154.68839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.32	1	104.48	103.98	104.98	0.16055								0	0	0	0.6607	1	44156	44156		3.2813	0	1		+		29064	10239	14378	14437	33365	33365					0.11723303274152386
RNCEEEEAWLK	11	Unmodified	_RNCEEEEAWLK_					0	0	0		ENSG00000137877|ENST00000320955|SPTBN5;SPTBN5|p.W1154Cfs*31|1|0.18|ENSG00000137877|chr15:41878350-41878351|-/TA|frameshift_variant	ENSG00000137877|ENST00000320955|SPTBN5	ENSG00000137877|ENST00000320955|SPTBN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.5526306033134	3	469.550481	1405.62961	1.2027	0.00056473	-1.3518	-0.00063476	-0.14913	-7.0025E-05	469.8839610964284	18.503	0.30367	18.503	18.312	18.615	0					25	9	3	0	0	0	1.0224	1	7662	7662		2.4348	0	1	1982700			29065	2799	14379	14438	33366	33366					-0.05697585873144817
RNELLKRV	8	Unmodified	_RNELLKRV_					0	0	0		nc|ENSG00000188385|Q5VZ66|JAKMIP3;ENSG00000188385|ENST00000684848|JAKMIP3;nc|ENSG00000176049|Q96AA8-4|JAKMIP2;nc|ENSG00000176049|Q96AA8-2|JAKMIP2;nc|ENSG00000176049|Q96AA8|JAKMIP2;ENSG00000176049|ENST00000616793|JAKMIP2	nc|ENSG00000188385|Q5VZ66|JAKMIP3	nc|ENSG00000188385|Q5VZ66|JAKMIP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3254272341728	2	514.322183	1026.62981	3.4144	0.0017561	3.3199	0.0017075	6.7344	0.0034636	514.3242692664951	108.9	0.20519	109.06	108.93	109.13	0.15898					20	9	3	0	0	0	0.89051	1	47185	47185		2.3027	0.24298	1	16421000			29066	4859	14380	14439	33367	33367					0.11756246699701478
RNENYNNTE	9	Unmodified	_RNENYNNTE_					0	0	0		tr|A0A553SNX5|A0A553SNX5_NIACITranslocation-enhancingproteinTepAOS=NialliacirculansOX=1397GN=CEQ21_25195PE=4SV=1	tr|A0A553SNX5|A0A553SNX5_NIACITranslocation-enhancingproteinTepAOS=NialliacirculansOX=1397GN=CEQ21_25195PE=4SV=1	tr|A0A553SNX5|A0A553SNX5_NIACITranslocation-enhancingproteinTepAOS=NialliacirculansOX=1397GN=CEQ21_25195PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	385.1674377322197	3	385.167136	1152.47958	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.71	1	103.71	103.21	104.21	0								0	0	0	0.42693	1	43605	43605		2.4985	1.2837	1				29067	16440	14381	14440	33368	33368					-0.09056189820603322
RNFILKLAI	9	Unmodified	_RNFILKLAI_					0	0	0		ENST00000448759.1_1_1:43352960-43353698:-|nuORF	ENST00000448759.1_1_1:43352960-43353698:-|nuORF	ENST00000448759.1_1_1:43352960-43353698:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3538085818291	2	544.352951	1086.69135	3.0607	0.0016661	-1.4003	-0.00076225	1.6604	0.00090386	544.3521973595097	107.51	0.24573	107.67	107.54	107.79	0.15781					46	12	5	0	0	0	0.85019	1	46228	46228		0.52476	0	1	1581299999.9999998			29068	6594	14382	14441	33369	33369					0.15147178398979122
RNGAPARA	8	Unmodified	_RNGAPARA_					0	0	0		ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.7285949587822	2	406.727918	811.441283	1.4127	0.00057458	-0.038334	-1.5592E-05	1.3744	0.00055899	406.72794984803323	70.004	0.40508	70.326	70.098	70.503	0.32224					37	12	4	0	0	0	0.89178	2	29290	29290;29328		0.69038	0	1	11049000			29069	7517	14383	14442	33370;33371	33370					0.02802013846076079
RNGAPARA	8	Unmodified	_RNGAPARA_					0	0	0		ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.7281677126884	2	406.727918	811.441283	1.6384	0.0006664	-0.75783	-0.00030823	0.8806	0.00035817	406.7275672344406	69.228	0.47375	70.594	70.284	70.758	1.3657					42	15	4	0	0	0	0.89051	2	28973	28973;29017		2.3027	0	1	14065000			29070	7517	14383	14442	33372;33373	33372					0.02802013846076079
RNGAPARA	8	Unmodified	_RNGAPARA_					0	0	0		ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	ENST00000595775.5_1_19:42817488-42818494:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	406.727918	811.441283	1.6384	0.0006664	-0.75783	-0.00030823	0.8806	0.00035817	406.7275672344406	69.228	0.47375	70.594	70.284	70.758	1.3657	0.24421	-0.00095364	NaN	2.3027	42	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14065000			29071	7517	14383	14442							0.02802013846076079
RNGEGSGPGA	10	Unmodified	_RNGEGSGPGA_					0	0	0			REV__nc|ENSG00000110514|Q8WXG6-4|MADD	REV__nc|ENSG00000110514|Q8WXG6-4|MADD	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1411926150322	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1556	1	8.8901	8.3901	9.3901	0.73452								0	0	0	0.66218	1	3388	3388		0.77653	0.31819	1		+		29072	9301	14384	14443	33374	33374					-0.04922907841273627
RNGQLILRRLK	11	Unmodified	_RNGQLILRRLK_					0	0	0			REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	REV__nc|ENSG00000139263|Q6UXM1-2|LRIG3	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.4088928103447	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.63	1	101.8	101.3	102.3	0.17032								0	0	0	0.63775	1	42763	42763		0.08335	0.08335	1		+		29073	10100	14385	14444	33375	33375					0.19978607281973382
RNHKQKRKKKK	11	Unmodified	_RNHKQKRKKKK_					0	0	0			REV__ENST00000282030.5_1_18:42644666-42644876:+|nuORF	REV__ENST00000282030.5_1_18:42644666-42644876:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1010009646416	4	370.493022	1477.94298	0.74035	0.0002743	-0.5344	-0.00019799	0.20595	7.6303E-05	370.49215324861325	26.052	0.14795	26.305	26.195	26.343	0.2531					6	4	2	0	0	0	0.14606	1	10883	10883		0	0	1	279180	+		29074	12258	14386	14445	33376	33376					0.2231278981316791
RNIKIIIPII	10	Unmodified	_RNIKIIIPII_					0	0	0		tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2742187380791	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.479	1	83.479	82.979	83.979	0								0	0	0	0.66254	1	34785	34785		0.15932	0	1				29075	16893	14387	14446	33377	33377					0.21848282529981589
RNIKIIIPII	10	Unmodified	_RNIKIIIPII_					0	0	0		tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	tr|A0A7D6VSZ1|A0A7D6VSZ1_9CLOTMembrane-associatedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05945PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2756530642509	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.379	1	84.379	83.879	84.879	0								0	0	0	0.66254	1	35164	35164		0.15932	0	1				29076	16893	14387	14446	33378	33378					0.21848282529981589
RNITITKL	8	Unmodified	_RNITITKL_					0	0	0		ENST00000419865.5_1_2:99388231-99388285:-|nuORF	ENST00000419865.5_1_2:99388231-99388285:-|nuORF	ENST00000419865.5_1_2:99388231-99388285:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2058593630791	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.58	1	103.75	103.25	104.25	0.16445								0	0	0	1.0178	1	43697	43697		0.40072	0	1				29077	6441	14388	14447	33379	33379					0.1166203957682228
RNKKKKEL	8	Unmodified	_RNKKKKEL_					0	0	0			REV__nc|ENSG00000118094|O43280-2|TREH	REV__nc|ENSG00000118094|O43280-2|TREH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3407470583916	2	522.337833	1042.66111	3.1856	0.001664	1.4784	0.00077221	4.664	0.0024362	522.3386305184323	107.55	0.2633	107.71	107.56	107.83	0.15795					56	13	6	0	0	0	0.89178	1	46190	46190		0.69038	0	1	2205400000	+		29078	9511	14389	14448	33380	33380					0.14148819733804885
RNKKNKRKGRK	11	Unmodified	_RNKKNKRKGRK_					0	0	0			REV__ENSG00000277531|ENST00000617053|PNMA8C	REV__ENSG00000277531|ENST00000617053|PNMA8C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.6409484744072	3	471.639287	1411.89603	3.5867	0.0016916	-1.5155	-0.00071476	2.0713	0.00097688	471.6393785272167	107.2	0.16128	107.36	107.27	107.43	0.15795					19	7	4	0	0	0	1.0395	1	46012	46012		0.08335	0	1	25463000	+		29079	12021	14390	14449	33381	33381					0.20655930262023503
RNKKNKRKGRK	11	Unmodified	_RNKKNKRKGRK_					0	0	0			REV__ENSG00000277531|ENST00000617053|PNMA8C	REV__ENSG00000277531|ENST00000617053|PNMA8C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	471.639287	1411.89603	1.7282	0.0008151	1.6352	0.00077124	3.3635	0.0015863	471.6400909883108	107.24	0.077316	107.24	107.21	107.29	0	-0.085872	0.003126	NaN	0.08335	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6000500	+		29080	12021	14390	14449							0.20655930262023503
RNKKNKRKGRK	11	Unmodified	_RNKKNKRKGRK_					0	0	0			REV__ENSG00000277531|ENST00000617053|PNMA8C	REV__ENSG00000277531|ENST00000617053|PNMA8C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	471.639287	1411.89603	3.3143	0.0015632	-0.90344	-0.0004261	2.4109	0.0011371	471.9731858831897	107.21	0.15607	107.37	107.28	107.43	0.15781	0.045459	-0.00046603	NaN	0.08335	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29485000	+		29081	12021	14390	14449							0.20655930262023503
RNKKNKRKGRK	11	Unmodified	_RNKKNKRKGRK_					0	0	0			REV__ENSG00000277531|ENST00000617053|PNMA8C	REV__ENSG00000277531|ENST00000617053|PNMA8C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	471.639287	1411.89603	3.5867	0.0016916	-1.5155	-0.00071476	2.0713	0.00097688	471.6393785272167	107.2	0.16128	107.36	107.27	107.43	0.15795	0.040413	-0.001332	NaN	0.08335	19	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25463000	+		29082	12021	14390	14449							0.20655930262023503
RNKKWKQQPKG	11	Unmodified	_RNKKWKQQPKG_					0	0	0			REV__ENST00000216160.10_1_22:39827477-39827837:+|nuORF	REV__ENST00000216160.10_1_22:39827477-39827837:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	466.1724731326103	3	466.608993	1396.80515	1.927	0.00089915	-0.47188	-0.00022019	1.4551	0.00067897	466.60883782851556	84.299	0.59226	85.458	85.251	85.843	1.159					23	18	2	0	0	0	0.14606	1	35443	35443		0.094841	0	1	1724600	+		29083	12067	14391	14450	33382	33382					0.12262041493909237
RNKKWKQQPKG	11	Unmodified	_RNKKWKQQPKG_					0	0	0			REV__ENST00000216160.10_1_22:39827477-39827837:+|nuORF	REV__ENST00000216160.10_1_22:39827477-39827837:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	466.608993	1396.80515	3.2419	0.0015127	-1.8373	-0.0008573	1.4046	0.00065538	466.6080431332682	85.09	1.6077	85.343	84.367	85.975	0.25227	0.047755	-0.00072914	NaN	0.094841	86	50	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211800	+		29084	12067	14391	14450							0.12262041493909237
RNKLIHLQ	8	Unmodified	_RNKLIHLQ_					0	0	0			REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1021.628161609173	1	1021.62652	1020.61925	1.2446	0.0012715	0.64559	0.00065955	1.8902	0.0019311	1021.6266348484329	107.69	0.17072	107.69	107.57	107.74	0					26	8	4	0	0	0	0.89178	1	46187	46187		0.69038	0	1	65201000	+		29085	8703	14392	14451	33383	33383					0.10976264045291373
RNKLIHLQ	8	Unmodified	_RNKLIHLQ_					0	0	0			REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1021.62652	1020.61925	1.2446	0.0012715	0.64559	0.00065955	1.8902	0.0019311	1021.6266348484329	107.69	0.17072	107.69	107.57	107.74	0	-0.015605	0.0014969	NaN	0.69038	26	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65201000	+		29086	8703	14392	14451							0.10976264045291373
RNKLIHLQ	8	Unmodified	_RNKLIHLQ_					0	0	0			REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	REV__nc|ENSG00000242441|Q9UNN4-2|GTF2A1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1021.62652	1020.61925	3.3319	0.0034039	-2.1564	-0.002203	1.1755	0.0012009	1021.6237424436702	107.57	0.20622	107.73	107.62	107.83	0.15795	0.019414	-0.0013656	NaN	0.69038	29	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302790000	+		29087	8703	14392	14451							0.10976264045291373
RNLLLVEL	8	Unmodified	_RNLLLVEL_					0	0	0			REV__nc|ENSG00000143420|O43768-8|ENSA	REV__nc|ENSG00000143420|O43768-8|ENSA	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.3112365603447	2	485.30821	968.601866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.16	1	108.22	107.72	108.72	0.050644								0	0	0	1.0178	1	46449	46449		0.69038	0	1		+		29088	14452	14393	14452	33384	33384					0.11630923719621933
RNLRALHLNSN	11	Unmodified	_RNLRALHLNSN_					0	0	0		ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	ENSG00000165379|ENST00000298119|LRFN5	MSMS	GG20161007_CRH_Patient100_A02_02	2	654.3678466677666	2	654.368184	1306.72182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.41	102.91	103.91	0.059502								0	0	0	0.63775	1	43332	43332		1.1933	0.12188	1				29089	3834	14394	14453	33385	33385					0.08072305046107431
RNPPRKARV	9	Unmodified	_RNPPRKARV_					0	0	0			REV__ENST00000558457.5_1_15:41576231-41578244:+|nuORF	REV__ENST00000558457.5_1_15:41576231-41578244:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3405029177666	2	547.338698	1092.66284	2.673	0.001463	0.375	0.00020525	3.048	0.0016683	547.3385812649504	94.042	0.5383	94.187	93.91	94.448	0.14493					30	16	3	0	0	0	0.84963	1	39395	39395		0.6015	0	1	1085700	+		29090	13883	14395	14454	33386	33386					0.12021873542403227
RNPSPRPFP	9	Unmodified	_RNPSPRPFP_					0	0	0		ENST00000452802.5_1_3:8540357-8543323:-|nuORF	ENST00000452802.5_1_3:8540357-8543323:-|nuORF	ENST00000452802.5_1_3:8540357-8543323:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2926513552666	2	534.290882	1066.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.45	1	105.61	105.11	106.11	0.15859								0	0	0	0.42693	1	44919	44919		1.8442	0	1				29091	6619	14396	14455	33387	33387					0.03659100631534784
RNQLVLLIIIV	11	Unmodified	_RNQLVLLIIIV_					0	0	0			REV__OR6B1|p.Y250Ifs*19|1|0.18|ENSG00000221813|chr7:144004743-144004743|C/-|frameshift_variant	REV__OR6B1|p.Y250Ifs*19|1|0.18|ENSG00000221813|chr7:144004743-144004743|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4349243044853	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.81	1	108.97	108.47	109.47	0.1548								0	0	0	0.63775	1	47055	47055		0.35063	0	1		+		29092	11875	14397	14456	33388	33388					0.21967936730175097
RNRFRRRS	8	Unmodified	_RNRFRRRS_					0	0	0		CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	CACNG3|p.Y229N|1|0.33|ENSG00000006116|chr16:24361600-24361600|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.3408691287041	2	574.337021	1146.65949	2.6091	0.0014985	3.9946	0.0022943	6.6037	0.0037928	574.3394597823749	96.91	0.16048	97.015	96.91	97.07	0.105					9	4	3	0	0	0	0.89181	1	40549	40549		0.6015	0.076735	1	1165600			29093	113	14398	14457	33389	33389					0.0920262348840879
RNRLLLKS	8	Unmodified	_RNRLLLKS_					0	0	0		nc|ENSG00000168679|O15374-4|SLC16A4;nc|ENSG00000168679|O15374-2|SLC16A4;nc|ENSG00000168679|O15374-5|SLC16A4;ENSG00000168679|ENST00000369779|SLC16A4	nc|ENSG00000168679|O15374-4|SLC16A4	nc|ENSG00000168679|O15374-4|SLC16A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3270141482353	2	500.324725	998.634898	3.1915	0.0015968	1.79	0.00089556	4.9814	0.0024923	500.32567980500704	107.6	0.2944	107.76	107.6	107.9	0.15781					61	15	6	0	0	0	0.89178	1	46281	46281		0.69038	0	1	3082599999.9999995			29094	4048	14399	14458	33390	33390					0.13552550562337728
RNRPLTRPK	9	Unmodified	_RNRPLTRPK_					0	0	0			REV__ZNF251-TMEM2|1|fusion	REV__ZNF251-TMEM2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.3529540896416	2	569.351806	1136.68906	1.3392	0.0007625	-0.79472	-0.00045247	0.54452	0.00031003	569.3510752006428	96.03	0.19972	96.03	95.92	96.12	0					14	6	3	0	0	0	0.85019	1	40161	40161		0.52476	0	1	1604600	+		29095	9927	14400	14459	33391	33391					0.12618142713881753
RNRRKKSH	8	Unmodified	_RNRRKKSH_					0	0	0		ENST00000506451.1_1_4:120415631-120418847:+|nuORF	ENST00000506451.1_1_4:120415631-120418847:+|nuORF	ENST00000506451.1_1_4:120415631-120418847:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	361.2219726443291	3	361.21984	1080.63769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.43	1	106.59	106.09	107.09	0.15781								0	0	0	1.0178	1	45577	45577		0.40072	0	1				29096	7005	14401	14460	33392	33392					0.1005981873984183
RNRRRTKLRL	10	Unmodified	_RNRRRTKLRL_					0	0	0			REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	684.5630981326103	2	684.942185	1367.86982	2.6867	0.0018403	2.0933	0.0014338	4.7801	0.0032741	684.9440005379647	107.25	0.12498	107.3	107.25	107.37	0.052452					12	5	3	0	0	0	0.1256	1	45829	45829		0	0	1	7301600	+		29097	12269	14402	14461	33393	33393					0.20059661090567715
RNRRRTKLRL	10	Unmodified	_RNRRRTKLRL_					0	0	0			REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	684.942185	1367.86982	1.4496	0.00099288	4.2295	0.002897	5.6791	0.0038899	684.9451446698654	107.29	0.12195	107.29	107.23	107.35	0	-0.063168	0.0028588	NaN	0	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7317900	+		29098	12269	14402	14461							0.20059661090567715
RNRRRTKLRL	10	Unmodified	_RNRRRTKLRL_					0	0	0			REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	684.942185	1367.86982	2.8331	0.0019405	1.7173	0.0011763	4.5504	0.0031168	684.9430974419187	107.26	0.17038	107.42	107.32	107.49	0.15781	0.064898	-0.00058261	NaN	0	29	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76194000	+		29099	12269	14402	14461							0.20059661090567715
RNRRRTKLRL	10	Unmodified	_RNRRRTKLRL_					0	0	0			REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	REV__ENST00000285071.8_1_17:17116566-17116938:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	684.942185	1367.86982	2.7128	0.0018581	1.6727	0.0011457	4.3855	0.0030038	684.9430652856395	107.25	0.1938	107.41	107.29	107.49	0.15795	0.052542	-0.0006437	NaN	0	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43043000	+		29100	12269	14402	14461							0.20059661090567715
RNRRVTRRK	9	Unmodified	_RNRRVTRRK_					0	0	0		ENSG00000162490|ENST00000294485|DRAXIN	ENSG00000162490|ENST00000294485|DRAXIN	ENSG00000162490|ENST00000294485|DRAXIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.5972778201103	3	414.597311	1240.7701	2.8851	0.0011961	-0.72691	-0.00030137	2.1582	0.00089477	414.59689974619147	92.381	0.49396	92.549	92.281	92.775	0.16835					60	15	5	0	0	0	0.85019	1	38755	38755		0.23584	0	1	26035000			29101	3623	14403	14462	33394	33394					0.15934843476634342
RNRVGGAI	8	Unmodified	_RNRVGGAI_					0	0	0			REV__tr|A0A7D6VQ74|A0A7D6VQ74_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01545PE=3SV=1	REV__tr|A0A7D6VQ74|A0A7D6VQ74_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7522765994072	2	421.751393	841.488233	1.9995	0.0008433	0.32992	0.00013914	2.3294	0.00098244	421.7514766676942	71.697	0.60223	72.021	71.72	72.322	0.32359					52	18	4	0	0	0	0.89176	1	30017	30017		0.79363	0	1	19699000	+		29102	15376	14404	14463	33395	33395					0.06114873397245901
RNSKLLFK	8	Unmodified	_RNSKLLFK_					0	0	0		ENST00000470357.1_1_1:7839701-7839758:+|nuORF	ENST00000470357.1_1_1:7839701-7839758:+|nuORF	ENST00000470357.1_1_1:7839701-7839758:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3132812380791	2	503.313826	1004.6131	2.3854	0.0012006	-3.0115	-0.0015158	-0.62614	-0.00031514	503.3121047558747	89.509	0.44083	89.509	89.338	89.778	0					22	13	2	0	0	0	0.89051	1	37394	37394		2.3027	1.5091	1	2389600			29103	6733	14405	14464	33396	33396					0.11097745813765414
RNTELKKL	8	Unmodified	_RNTELKKL_					0	0	0		nc|ENSG00000073614|P29375-2|KDM5A;ENSG00000073614|ENST00000399788|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	nc|ENSG00000073614|P29375-2|KDM5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3106872439384	2	501.308741	1000.60293	3.6194	0.0018145	1.1479	0.00057543	4.7673	0.0023899	501.30954961305383	90.495	0.42031	91.861	91.607	92.027	1.366					17	12	2	0	0	0	0.88958	1	38144	38144		2.8892	0	1	1010700			29104	901	14406	14465	33397	33397					0.10265138088516323
RNTKYKGF	8	Unmodified	_RNTKYKGF_					0	0	0		tr|A0A553SJI9|A0A553SJI9_NIACI3'-5'exonucleaseKapDOS=NialliacirculansOX=1397GN=kapDPE=4SV=1	tr|A0A553SJI9|A0A553SJI9_NIACI3'-5'exonucleaseKapDOS=NialliacirculansOX=1397GN=kapDPE=4SV=1	tr|A0A553SJI9|A0A553SJI9_NIACI3'-5'exonucleaseKapDOS=NialliacirculansOX=1397GN=kapDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2810546755791	2	507.279983	1012.54541	4.658	0.0023629	0.012559	6.3709E-06	4.6706	0.0023693	507.2797952778349	86.954	0.64079	88.449	88.093	88.734	1.4953					30	20	2	0	0	0	0.88958	1	36603	36603		2.8892	0	1	733090			29105	16251	14407	14466	33398	33398					0.03964295882940405
RNVKKTKS	8	Unmodified	_RNVKKTKS_					0	0	0			REV__ENST00000544670.5_1_16:19576218-19584460:+|nuORF	REV__ENST00000544670.5_1_16:19576218-19584460:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.8017150759697	2	480.801083	959.587613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.866	1	78.866	78.366	79.366	0								0	0	0	1.0178	1	32830	32830		0.79363	0	1		+		29106	9111	14408	14467	33399	33399					0.10620271291327299
RNYFHYFKENF	11	Unmodified	_RNYFHYFKENF_					0	0	0		tr|A0A553SNA2|A0A553SNA2_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24040PE=4SV=1	tr|A0A553SNA2|A0A553SNA2_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24040PE=4SV=1	tr|A0A553SNA2|A0A553SNA2_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24040PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	782.9271118044853	2	782.870225	1563.7259	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.457	1	99.655	99.155	100.15	0.19767								0	0	0	0.63775	1	41869	41869		3.2813	0.28607	1				29107	16413	14409	14468	33400	33400					-0.03341650250877137
RPAAGKPRP	9	Unmodified	_RPAAGKPRP_					0	0	0		nc|ENSG00000168061|A6NKF1-2|SAC3D1;ENST00000530213.5_1_11:64808530-64811777:+|nuORF;SAC3D1|p.F278Vfs*88|1|0.11|ENSG00000168061|chr11:65044342-65044343|-/AGTGTTTGGATATTTAGTAGAGACAG|frameshift_variant;ENSG00000168061|ENST00000652489|SAC3D1;nc|ENSG00000168061|A6NKF1|SAC3D1	nc|ENSG00000168061|A6NKF1-2|SAC3D1	nc|ENSG00000168061|A6NKF1-2|SAC3D1	MSMS	GG20161007_CRH_Patient100_A02_02	2	475.2911254763603	2	475.288143	948.561733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.54	103.04	104.04	0.059502								0	0	0	0.42693	1	43411	43411		1.8442	0	1				29108	4012	14410	14469	33401	33401					0.08539421839691386
RPAAGKPRP	9	Unmodified	_RPAAGKPRP_					0	0	0		nc|ENSG00000168061|A6NKF1-2|SAC3D1;ENST00000530213.5_1_11:64808530-64811777:+|nuORF;SAC3D1|p.F278Vfs*88|1|0.11|ENSG00000168061|chr11:65044342-65044343|-/AGTGTTTGGATATTTAGTAGAGACAG|frameshift_variant;ENSG00000168061|ENST00000652489|SAC3D1;nc|ENSG00000168061|A6NKF1|SAC3D1	nc|ENSG00000168061|A6NKF1-2|SAC3D1	nc|ENSG00000168061|A6NKF1-2|SAC3D1	MSMS	GG20161007_CRH_Patient100_W632_02	4	475.2908508181572	2	475.288143	948.561733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.55	103.05	104.05	0.18066								0	0	0	0.42693	1	43515	43515		1.8442	0	1				29109	4012	14410	14469	33402	33402					0.08539421839691386
RPAKIVTRP	9	Unmodified	_RPAKIVTRP_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5601379275322	3	346.557459	1036.65055	2.5962	0.00089973	3.1838	0.0011034	5.78	0.0020031	346.55886142392546	62.323	1.3536	64.28	63.938	65.292	1.9571					61	32	3	0	0	0	0.82654	1	26087	26087		2.2828	0	1	1890000	+		29110	10054	14411	14470	33403	33403					0.1336883707938341
RPAKIVTRP	9	Unmodified	_RPAKIVTRP_					0	0	0			REV__nc|ENSG00000138193|Q9P212-2|PLCE1	REV__nc|ENSG00000138193|Q9P212-2|PLCE1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	346.557459	1036.65055	1.6388	0.00056795	4.799	0.0016631	6.4378	0.0022311	346.5593235194652	62.425	0.98961	63.841	63.143	64.133	1.4154	-0.24625	0.00047601	NaN	2.2828	58	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3052900	+		29111	10054	14411	14470							0.1336883707938341
RPAMLLWP	8	Unmodified	_RPAMLLWP_					0	0	0		nc|ENSG00000166548|O00142-6|TK2	nc|ENSG00000166548|O00142-6|TK2	nc|ENSG00000166548|O00142-6|TK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2820922732353	2	492.278398	982.542243	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.83	1	103.89	103.39	104.39	0.059502								0	0	0	1.0178	1	43652	43652		2.5775	0.27475	1				29112	7919	14412	14471	33404	33404					0.05027329504582667
RPAPPKQR	8	Unmodified	_RPAPPKQR_					0	0	0			REV__ENSG00000206262|ENST00000383165|FOXL2NB	REV__ENSG00000206262|ENST00000383165|FOXL2NB	MSMS	GG20161007_CRH_Patient100_W632_01	3	475.2906677126884	2	475.288143	948.561733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.42	1	103.58	103.08	104.08	0.16445								0	0	0	1.0178	1	43594	43594		2.3027	0	1		+		29113	11825	14413	14472	33405	33405					0.08539421839702754
RPAPWRQAP	9	Unmodified	_RPAPWRQAP_					0	0	0			REV__ENST00000594671.5_1_19:4676093-4676540:-|nuORF	REV__ENST00000594671.5_1_19:4676093-4676540:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2017700076103	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.29	1	101.29	100.79	101.79	0								0	0	0	0.42693	1	42413	42413		1.0715	0	1		+		29114	14088	14414	14473	33406	33406					0.047508068684237514
RPAQAAAA	8	Unmodified	_RPAQAAAA_					0	0	0		ENST00000544304.5_1_12:120554610-120555222:-|nuORF	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2121154665947	2	378.211569	754.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.89	1	104.05	103.55	104.55	0.16055								0	0	0	1.0178	1	43901	43901		0.69038	0	1				29115	9188	14415	14474	33407	33407					0.02155806723214937
RPARAPAA	8	Unmodified	_RPARAPAA_					0	0	0			REV__nc|ENSG00000141858|Q6SPF0|SAMD1	REV__nc|ENSG00000141858|Q6SPF0|SAMD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2427856326103	2	405.240661	808.46677	1.9728	0.00079948	-0.48166	-0.00019519	1.4912	0.00060429	405.2403264425708	66.91	1.0268	67.234	66.811	67.838	0.32449					59	33	2	0	0	0	0.89178	3	27888	27888;27937;28176		0.69038	0	1	4085200	+		29116	14448	14416	14475	33408;33409;33410	33408					0.05487488368498816
RPARARSLPL	10	Unmodified	_RPARARSLPL_					0	0	0		nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.5726501345634	3	379.57188	1135.69381	2.5131	0.00095392	-0.54345	-0.00020628	1.9697	0.00074764	379.5717506133168	88.258	0.49749	88.493	88.259	88.756	0.23471					50	15	5	0	0	0	0.8974	1	36961	36961		1.7423	0	1	20485000			29117	7835	14417	14476	33411	33411					0.1313902685665198
RPARLMLIPRS	11	Unmodified	_RPARLMLIPRS_					0	0	0			REV__nc|ENSG00000163534|Q96LA6-3|FCRL1	REV__nc|ENSG00000163534|Q96LA6-3|FCRL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2699462771416	3	437.267691	1308.78124	2.1706	0.00094913	0.9093	0.00039761	3.0799	0.0013467	437.2679028949031	41.57	0.66568	41.887	41.371	42.037	0.31683					36	22	2	0	0	0	1.0365	1	17342	17342		1.2148	0	1	696990	+		29118	10690	14418	14477	33412	33412					0.13920484735899663
RPATIRFL	8	Unmodified	_RPATIRFL_					0	0	0		tr|A0A7D6ZSM5|A0A7D6ZSM5_9CLOTPyruvate,phosphatedikinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16395PE=3SV=1	tr|A0A7D6ZSM5|A0A7D6ZSM5_9CLOTPyruvate,phosphatedikinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16395PE=3SV=1	tr|A0A7D6ZSM5|A0A7D6ZSM5_9CLOTPyruvate,phosphatedikinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16395PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2018920779228	3	325.202905	972.586885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.241	1	99.241	98.741	99.741	0								0	0	0	1.0178	1	41532	41532		0.40072	0	1				29119	17135	14419	14478	33413	33413					0.0994947664225947
RPAVSFLAL	9	Unmodified	_RPAVSFLAL_					0	0	0			REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2009460330009	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.955	1	91.164	90.664	91.664	0.20904								0	0	0	0.42693	1	38106	38106		1.0715	0.61312	1		+		29120	12757	14420	14479	33414	33414					0.08826654548113311
RPAVSFLAL	9	Unmodified	_RPAVSFLAL_					0	0	0			REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2009460330009	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.26	1	103.32	102.82	103.82	0.059502								0	0	0	0.42693	1	43284	43284		1.0715	0	1		+		29121	12757	14420	14479	33415	33415					0.08826654548113311
RPAVSFLAL	9	Unmodified	_RPAVSFLAL_					0	0	0			REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2013122439384	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.4	1	103.46	102.96	103.96	0.059502								0	0	0	0.42693	1	43365	43365		1.0715	0.61312	1		+		29122	12757	14420	14479	33416	33416					0.08826654548113311
RPAVSFLAL	9	Unmodified	_RPAVSFLAL_					0	0	0			REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	REV__ENST00000380394.8_1_9:19380192-19380240:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	325.2015563845634	3	325.19916	972.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.24	1	103.42	102.92	103.92	0.18066								0	0	0	0.42693	1	43450	43450		1.0715	0.61312	1		+		29123	12757	14420	14479	33417	33417					0.08826654548113311
RPEAAPPTPW	10	Unmodified	_RPEAAPPTPW_					0	0	0		ENST00000262376.10_1_16:4897931-4902890:+|nuORF;ENST00000592120.5_2_16:4897931-4898255:+|nuORF	ENST00000262376.10_1_16:4897931-4902890:+|nuORF	ENST00000262376.10_1_16:4897931-4902890:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	561.2908203005791	2	561.290548	1120.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.43	102.93	103.93	0.059502								0	0	0	0.65926	1	43340	43340		5.7319	0.97584	1				29124	5636	14421	14480	33418	33418					0.011082611918027396
RPEEIAALL	9	Unmodified	_RPEEIAALL_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000485349.5_1_6:31936258-31936911:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2970458865166	2	506.295299	1010.57605	1.6911	0.00085621	1.2911	0.00065366	2.9822	0.0015099	506.29631888709304	48.871	0.36996	50.259	50.048	50.418	1.388					25	11	3	0	0	0	0.23219	1	20458	20458		24.991	0.97039	1	2436400			29125	5135	14422	14481	33419	33419					0.0711802947733986
RPEEIAALL	9	Unmodified	_RPEEIAALL_					0	0	0		ENSG00000204351|ENST00000375394|SKIC2;ENST00000465703.5_1_6:31936641-31937206:+|nuORF;ENST00000470453.1_1_6:31936465-31937326:+|nuORF;ENST00000485349.5_1_6:31936258-31936911:+|nuORF;ENST00000483553.5_1_6:31936441-31937206:+|nuORF	ENSG00000204351|ENST00000375394|SKIC2	ENSG00000204351|ENST00000375394|SKIC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2960388064384	2	506.295299	1010.57605	2.1434	0.0010852	0.36903	0.00018684	2.5124	0.001272	506.2955946782361	48.366	0.33833	50.343	50.144	50.483	1.9772					16	10	2	0	0	0	0.33274	2	20254	20204;20254		24.991	5.552	1	2670600			29126	5135	14422	14481	33420;33421	33421					0.0711802947733986
RPEEIIQIL	9	Unmodified	_RPEEIIQIL_					0	0	0		ENSG00000150054|ENST00000683449|MPP7;nc|ENSG00000150054|Q5T2T1-2|MPP7	ENSG00000150054|ENST00000683449|MPP7	ENSG00000150054|ENST00000683449|MPP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8296996951103	2	555.829506	1109.64446	0.93388	0.00051908	-0.13953	-7.7556E-05	0.79435	0.00044152	555.829459381681	57.237	0.53481	58.652	58.369	58.904	1.4145					61	18	4	0	0	0	0.033102	3	24020	23934;23982;24020		82.529	7.7329	1	71222000			29127	3262	14423	14482	33422;33423;33424	33424					0.09402274057197246
RPEEIIQIL	9	Unmodified	_RPEEIIQIL_					0	0	0		ENSG00000150054|ENST00000683449|MPP7;nc|ENSG00000150054|Q5T2T1-2|MPP7	ENSG00000150054|ENST00000683449|MPP7	ENSG00000150054|ENST00000683449|MPP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8300048708916	2	555.829506	1109.64446	0.81633	0.00045374	0.57463	0.0003194	1.391	0.00077314	555.8298658252235	56.636	0.4804	58.604	58.364	58.845	1.9684					56	15	5	0	0	0	0.043696	2	23702	23702;23751		72.968	7.7329	1	66473000			29128	3262	14423	14482	33425;33426	33425					0.09402274057197246
RPEIRRQVP	9	Unmodified	_RPEIRRQVP_					0	0	0			REV__ENSG00000131899|ENST00000316843|LLGL1	REV__ENSG00000131899|ENST00000316843|LLGL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3481323122978	2	575.843813	1149.67307	2.1198	0.0012207	-0.53427	-0.00030766	1.5856	0.00091304	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.84963	1	32145	32145		0.6015	0	1	3953600	+		29129	9831	14424	14483	33427	33427					0.10422436476960684
RPELAQRA	8	Unmodified	_RPELAQRA_					0	0	0			REV__ENST00000445808.3_1_10:99094327-99094501:+|nuORF	REV__ENST00000445808.3_1_10:99094327-99094501:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7122070193291	3	314.182281	939.525013	0.11671	3.6667E-05	1.8011	0.00056586	1.9178	0.00060253	314.1820333881439	24.166	0.36735	24.408	24.197	24.564	0.24252					17	11	2	0	0	0	2.3239	1	10011	10011		1.3295	0	1	378500	+		29130	13104	14425	14484	33428	33428					0.05283125223127172
RPGALPVLLT	10	Unmodified	_RPGALPVLLT_					0	0	0			REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2223083376884	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.687	1	72.687	72.187	73.187	0								0	0	0	0.66227	1	30263	30263		0.62683	0.22611	1		+		29131	13721	14426	14485	33429	33429					0.12766899127996112
RPGALPVLLT	10	Unmodified	_RPGALPVLLT_					0	0	0			REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2239257693291	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.518	1	78.518	78.018	79.018	0								0	0	0	0.66222	1	32685	32685		0.69767	0.07084	1		+		29132	13721	14426	14485	33430	33430					0.12766899127996112
RPGALPVLLT	10	Unmodified	_RPGALPVLLT_					0	0	0			REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2249633669853	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.634	1	72.959	72.459	73.459	0.32494								0	0	0	0.66227	1	30388	30388		0.62683	0.35781	1		+		29133	13721	14426	14485	33431	33431					0.12766899127996112
RPGALPVLLT	10	Unmodified	_RPGALPVLLT_					0	0	0			REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2225829958916	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.654	1	78.963	78.463	79.463	0.30933								0	0	0	0.66227	1	32883	32883		0.62683	0.22611	1		+		29134	13721	14426	14485	33432	33432					0.12766899127996112
RPGALPVLLT	10	Unmodified	_RPGALPVLLT_					0	0	0			REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	REV__ENST00000532414.2_1_1:156044763-156044958:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2239562869072	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.464	1	88.698	88.198	89.198	0.23471								0	0	0	0.66227	1	37093	37093		0.62683	0.22611	1		+		29135	13721	14426	14485	33433	33433					0.12766899127996112
RPGRPRRPRRQ	11	Unmodified	_RPGRPRRPRRQ_					0	0	0		ENST00000296350.9_1_3:196729451-196730141:-|nuORF	ENST00000296350.9_1_3:196729451-196730141:-|nuORF	ENST00000296350.9_1_3:196729451-196730141:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	716.4388915896416	2	716.435058	1430.85556	2.5054	0.0017949	0.83451	0.00059787	3.3399	0.0023928	716.4356299508631	84.898	1.2027	85.159	84.406	85.609	0.26083					68	37	3	0	0	0	1.0395	1	35499	35499		0.30703	0	1	1137800			29136	5733	14427	14486	33434	33434					0.15737008662290464
RPGVLRRAL	9	Unmodified	_RPGVLRRAL_					0	0	0			REV__tr|A0A553SR02|A0A553SR02_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00070PE=3SV=1	REV__tr|A0A553SR02|A0A553SR02_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00070PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	346.5594665408134	3	346.561203	1036.66178	-1.3912	-0.00048215	-3.0483	-0.0010564	-4.4396	-0.0015386	346.56009039462316	67.788	1.2176	67.788	67.172	68.39	0					52	20	3	0	0	0	0.847	1	28273	28273		0.96228	0	1	2569300	+		29137	15142	14428	14487	33435	33435					0.14491659173495464
RPGYKVTK	8	Unmodified	_RPGYKVTK_					0	0	0		ENST00000592314.5_1_19:2243417-2246882:+|nuORF;ENSG00000104897|ENST00000221494|SF3A2	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5660278201103	1	948.562527	947.55525	2.6696	0.0025323	1.8579	0.0017624	4.5276	0.0042947	948.5646340594668	103.88	0.076233	104.04	103.97	104.05	0.16055					9	3	3	0	0	0	0.89178	1	43889	43889		0.69038	0	1	49530000			29138	1489	14429	14488	33436	33436					0.07937483888326824
RPGYKVTK	8	Unmodified	_RPGYKVTK_					0	0	0		ENST00000592314.5_1_19:2243417-2246882:+|nuORF;ENSG00000104897|ENST00000221494|SF3A2	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	ENST00000592314.5_1_19:2243417-2246882:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5665771365166	1	948.562527	947.55525	3.4656	0.0032874	0.39427	0.00037399	3.8599	0.0036614	948.5633744270116	103.82	0.1198	104	103.91	104.03	0.1731					13	5	4	0	0	0	0.89178	1	43800	43800		0.69038	0	1	81250000			29139	1489	14429	14488	33437	33437					0.07937483888326824
RPIKKFHYRQR	11	Unmodified	_RPIKKFHYRQR_					0	0	0			REV__ENST00000394135.7_1_15:99789787-99791379:-|nuORF	REV__ENST00000394135.7_1_15:99789787-99791379:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	765.1584350466728	2	764.952218	1527.88988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.403	1	98.659	98.159	99.159	0.25636								0	0	0	0.63775	1	41410	41410		1.1933	0.12188	1		+		29140	12825	14430	14489	33438	33438					0.14705412030525622
RPISDFLTL	9	Unmodified	_RPISDFLTL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3051635622978	2	531.303124	1060.5917	2.9806	0.0015836	-0.46926	-0.00024932	2.5113	0.0013343	531.302936772082	62.816	0.35989	64.23	64.016	64.376	1.4134					19	11	2	0	0	0	0.075994	2	26316	26316;26364		57.722	11.993	1	6363100			29141	4064	14431	14490	33439;33440	33439					0.06382315994369492
RPISDFLTL	9	Unmodified	_RPISDFLTL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3040649294853	2	531.303124	1060.5917	3.3809	0.0017963	-1.5734	-0.00083594	1.8075	0.00096033	531.3024097328638	62.178	0.35967	64.135	63.968	64.328	1.9571					21	11	2	0	0	0	0.070055	1	26091	26091		60.074	7.8056	1	5669500			29142	4064	14431	14490	33441	33441					0.06382315994369492
RPKGRPKL	8	Unmodified	_RPKGRPKL_					0	0	0			REV__ENSG00000188869|ENST00000359440|TMC3	REV__ENSG00000188869|ENST00000359440|TMC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1550170779228	3	317.878533	950.613768	0.0404	1.2842E-05	-3.7435	-0.00119	-3.7031	-0.0011771	317.87862614245296	22.611	0.11828	22.844	22.741	22.86	0.23306					6	3	2	0	0	0	2.3239	1	9424	9424		0	0	1	109750	+		29143	11590	14432	14491	33442	33442					0.13648585253451984
RPKKTRAMRRR	11	Unmodified	_RPKKTRAMRRR_					0	0	0		ENSG00000136942|ENST00000348462|RPL35;ENST00000487431.1_1_9:127620199-127623861:-|nuORF;ENST00000433398.1_1_7:66071742-66071856:-|nuORF;ENST00000373570.8_1_9:127620199-127620799:-|nuORF	ENSG00000136942|ENST00000348462|RPL35	ENSG00000136942|ENST00000348462|RPL35	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.9674560427666	3	485.968639	1454.88409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.394	1	17.545	17.045	18.045	0.15093								0	0	0	0.63775	1	7216	7216		0.45452	0.29519	1				29144	2754	14433	14492	33443	33443					0.17483990247205838
RPKRPLLW	8	Unmodified	_RPKRPLLW_					0	0	0			REV__ENST00000054950.3_1_11:32118842-32119917:+|nuORF	REV__ENST00000054950.3_1_11:32118842-32119917:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0700866580009	3	355.894183	1064.66072	2.1028	0.00074837	2.5574	0.00091018	4.6602	0.0016586	355.8951192631358	83.792	0.39465	84.062	83.863	84.257	0.27029					17	12	3	0	0	0	2.3239	1	35054	35054		0.45834	0.45834	1	1307200	+		29145	12040	14434	14493	33444	33444					0.1309744480461177
RPKRPLLW	8	Unmodified	_RPKRPLLW_					0	0	0			REV__ENST00000054950.3_1_11:32118842-32119917:+|nuORF	REV__ENST00000054950.3_1_11:32118842-32119917:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	355.894183	1064.66072	2.3163	0.00082437	3.0173	0.0010738	5.3336	0.0018982	355.8951576708668	82.684	0.18165	84.354	84.205	84.386	1.67	0.14579	0.00027946	NaN	0.45834	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	638030	+		29146	12040	14434	14493							0.1309744480461177
RPKRPRRR	8	Unmodified	_RPKRPRRR_					0	0	0			REV__sp|Q6SWC9|RL13_HCMVMMembraneproteinRL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=RL13PE=3SV=1	REV__sp|Q6SWC9|RL13_HCMVMMembraneproteinRL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=RL13PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.5788452029228	3	374.57948	1120.71661	0.53727	0.00020125	-2.5099	-0.00094016	-1.9726	-0.0007389	374.5783959373905	30.531	0.46067	32.346	32.108	32.568	1.8151					46	14	4	0	0	0	0.89156	1	12752	12752		1.4819	0	1	4262900	+		29147	14663	14435	14494	33445	33445					0.161080907647829
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9443847537041	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.713	1	40.713	40.213	41.213	0								0	0	0	0.66166	1	17055	17055		1.6526	0	1				29148	2941	14436	14495	33446	33446					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9465209841728	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.948	1	41.948	41.448	42.448	0								0	0	0	0.6624	1	17556	17556		0.40072	0	1				29149	2941	14436	14495	33447	33447					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9450561404228	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.306	1	39.618	39.118	40.118	0.31176								0	0	0	0.6624	1	16532	16532		0.40072	0	1				29150	2941	14436	14495	33448	33448					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9445678591728	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.155	1	41.472	40.972	41.972	0.31683								0	0	0	0.6624	1	17292	17292		0.40072	0	1				29151	2941	14436	14495	33449	33449					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9460937380791	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.726	1	42.045	41.545	42.545	0.31942								0	0	0	0.66264	1	17524	17524		0	0	1				29152	2941	14436	14495	33450	33450					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9446288943291	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.099	1	46.428	45.928	46.928	0.32899								0	0	0	0.66264	1	19347	19347		0	0	1				29153	2941	14436	14495	33451	33451					0.22669750584282156
RPKRRKPRVK	10	Unmodified	_RPKRRKPRVK_					0	0	0		ENST00000562886.1_1_16:84088056-84093058:-|nuORF;ENSG00000140943|ENST00000343411|MBTPS1	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	ENST00000562886.1_1_16:84088056-84093058:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9428588747978	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.412	1	46.741	46.241	47.241	0.32899								0	0	0	0.66264	1	19474	19474		0	0	1				29154	2941	14436	14495	33452	33452					0.22669750584282156
RPLHINKAGSS	11	Unmodified	_RPLHINKAGSS_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	393.8916808962822	3	393.891278	1178.652	-0.96239	-0.00037908	3.2374	0.0012752	2.275	0.00089612	393.8924004486618	18.214	0.25134	18.214	18.088	18.34	0					24	10	3	0	0	0	0.50248	1	7549	7549		23.964	7.815	1	2063100			29155	7578	14437	14496	33453	33453					0.06982426377476258
RPLHKKLV	8	Unmodified	_RPLHKKLV_					0	0	0		nc|ENSG00000128512|Q8N1I0-2|DOCK4;nc|ENSG00000128512|Q8N1I0|DOCK4;ENSG00000128512|ENST00000428084|DOCK4	nc|ENSG00000128512|Q8N1I0-2|DOCK4	nc|ENSG00000128512|Q8N1I0-2|DOCK4	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.8344909548759	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.61	1	115.8	115.3	116.3	0.18399								0	0	0	1.0178	1	50057	50057		0.79363	0	1				29156	2368	14438	14497	33454	33454					0.15458042430327623
RPLLAALA	8	Unmodified	_RPLLAALA_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	824.4098388552666	1	824.535249	823.527973	2.8389	0.0023407	-3.4479	-0.0028429	-0.609	-0.00050214	824.5324874288235	104.75	0.15012	104.91	104.86	105.01	0.16055					12	7	2	0	0	0	2.3239	1	44516	44516		0	0	1	3689300			29157	4405	14439	14498	33455	33455					0.10915000347927162
RPLLAALA	8	Unmodified	_RPLLAALA_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	824.535249	823.527973	2.9809	0.0024578	-4.5492	-0.003751	-1.5684	-0.0012932	824.5344922478106	104.74	0.15162	104.91	104.82	104.98	0.1731	0.00034163	-0.00070611	NaN	0	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6036400			29158	4405	14439	14498							0.10915000347927162
RPLLLAAT	8	Unmodified	_RPLLLAAT_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	854.5463134646416	1	854.545814	853.538538	3.0796	0.0026316	-4.4891	-0.0038362	-1.4096	-0.0012045	854.5416963898124	107.69	0.18375	107.84	107.74	107.92	0.15796					16	9	2	0	0	0	0.89178	1	46325	46325		0.69038	0	1	23305000			29159	5393	14440	14499	33456	33456					0.1059098300235064
RPLLLAAT	8	Unmodified	_RPLLLAAT_					0	0	0		ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	ENSG00000254470|ENST00000532090|AP5B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	854.545814	853.538538	2.9753	0.0025425	-3.766	-0.0032182	-0.79069	-0.00067568	854.5421531587959	107.71	0.18027	107.87	107.73	107.92	0.15781	0.014363	0.0002308	NaN	0.69038	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23745000			29160	5393	14440	14499							0.1059098300235064
RPLLLLLLL	9	Unmodified	_RPLLLLLLL_					0	0	0		nc|ENSG00000185896|P11279-2|LAMP1;ENSG00000185896|ENST00000332556|LAMP1;ENSG00000070031|ENST00000176195|SCT;ENSG00000184709|ENST00000371542|LRRC26;ENSG00000110811|ENST00000290510|P3H3;ENSG00000215644|ENST00000400723|GCGR;SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant;ENSG00000184985|ENST00000507866|SORCS2	REV__ENSG00000109758|ENST00000382774|HGFAC;ENSG00000215644|ENST00000400723|GCGR;SORCS2|p.R839Lfs*24|1|0.03|ENSG00000184985|chr4:7723787-7723788|-/T|frameshift_variant	REV__ENSG00000109758|ENST00000382774|HGFAC	MSMS	GG20161007_CRH_Patient100_A02_02	2	355.2605773806572	3	355.258239	1062.75289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.56	1	103.62	103.12	104.12	0.059502								0	0	0	0.42693	1	43465	43465		0	0	1			+	29161	9280;5258;4722	14441	14500	33457	33457					0.22402110098278172
RPLLSPVLIRA	11	Unmodified	_RPLLSPVLIRA_					0	0	0			REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	309.5242492556572	4	309.455308	1233.79213	0.12436	3.8483E-05	0.18471	5.716E-05	0.30907	9.5642E-05	309.4556462149077	24.211	0.57533	24.454	24.288	24.863	0.24251					32	18	2	0	0	0	0.14606	1	10130	10130		2.2527	1.143	1	1816300	+		29162	12039	14442	14501	33458	33458					0.18458210381845674
RPLLSPVLIRA	11	Unmodified	_RPLLSPVLIRA_					0	0	0			REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	309.5243713259697	4	309.455308	1233.79213	0.014797	4.5789E-06	-0.82821	-0.00025629	-0.81341	-0.00025171	309.45488775836304	22.228	0.76487	22.451	22.232	22.997	0.223					67	25	4	0	0	0	0.14606	1	9171	9171		0.36667	0	1	6623200	+		29163	12039	14442	14501	33459	33459					0.18458210381845674
RPLLSPVLIRA	11	Unmodified	_RPLLSPVLIRA_					0	0	0			REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	REV__ENST00000013070.10_1_14:93694016-93694247:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5243408083916	4	309.455308	1233.79213	-0.23674	-7.3262E-05	-0.96135	-0.00029749	-1.1981	-0.00037076	309.4550558569523	20.779	0.65333	22.354	22.028	22.681	1.5748					62	21	4	0	0	0	0.14606	1	8532	8532		0.40827	0	1	5752300	+		29164	12039	14442	14501	33460	33460					0.18458210381845674
RPLPRRRKR	9	Unmodified	_RPLPRRRKR_					0	0	0			REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	REV__ENST00000298966.2_11:93232511-93276567:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	309.5245544314384	4	309.457445	1233.80067	-3.0363	-0.0009396	-3.3553	-0.0010383	-6.3915	-0.0019779	309.45645972330726	22.929	1.6169	22.929	22.75	24.367	0					106	52	3	0	0	0	0.11941	1	9548	9548		1.0715	0	1	1665200	+		29165	12309	14443	14502	33461	33461					0.19312621861672596
RPLRPRLVRA	10	Unmodified	_RPLRPRLVRA_					0	0	0			REV__ENST00000380191.8_1_10:5855216-5855492:-|nuORF	REV__ENST00000380191.8_1_10:5855216-5855492:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.8997985720634	4	309.205825	1232.79419	-2.1028	-0.0006502	0.80683	0.00024948	-1.296	-0.00040072	309.45761629977204	57.706	0.39949	57.706	57.449	57.849	0					15	12	2	0	0	0	0.12561	1	24035	24035		0	0	1	654850	+		29166	12756	14444	14503	33462	33462					0.18710683910308035
RPLRWARTWR	10	Unmodified	_RPLRWARTWR_					0	0	0			REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4131347537041	2	699.404904	1396.79525	2.7852	0.001948	4.0329	0.0028206	6.8181	0.0047686	699.4075493067271	85.843	0.62395	85.843	85.508	86.132	0					26	19	2	0	0	0	0.89803	1	35802	35802		1.4819	0.28856	1	603770	+		29167	8074	14445	14504	33463	33463					0.11272898279185029
RPLRWARTWR	10	Unmodified	_RPLRWARTWR_					0	0	0			REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	699.404904	1396.79525	2.7852	0.001948	4.0329	0.0028206	6.8181	0.0047686	699.4075493067271	85.843	0.62395	85.843	85.508	86.132	0	-0.10475	-0.0011577	NaN	1.4819	26	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603770	+		29168	8074	14445	14504							0.11272898279185029
RPLRWARTWR	10	Unmodified	_RPLRWARTWR_					0	0	0			REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	REV__nc|ENSG00000106077|Q8NFV4-3|ABHD11	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	699.404904	1396.79525	2.5142	0.0017585	5.5584	0.0038876	8.0727	0.0056461	699.4085459144878	85.8	0.46489	86.052	85.695	86.16	0.25227	0.10475	0.00097622	NaN	1.4819	19	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	677590	+		29169	8074	14445	14504							0.11272898279185029
RPLTRPSLL	9	Unmodified	_RPLTRPSLL_					0	0	0			REV__ENST00000485359.1_1_1:153912533-153913115:-|nuORF	REV__ENST00000485359.1_1_1:153912533-153913115:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8392822146416	2	526.832383	1051.65021	3.3417	0.0017605	-1.4128	-0.00074432	1.9289	0.0010162	526.8316360471758	96.044	0.37224	96.446	96.175	96.547	0.40208					19	11	2	0	0	0	0.68551	1	40345	40345		7.9102	0.62092	1	2810700	+		29170	8436	14446	14505	33464	33464					0.12645417359499334
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2234069705009	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.774	1	62.104	61.604	62.604	0.32974								0	0	0	0.42693	1	25882	25882		1.0715	0	1		+		29171	9264	14447	14506	33465	33465					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2228881716728	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.215	1	62.545	62.045	63.045	0.32974								0	0	0	0.42693	1	26065	26065		1.0715	0	1		+		29172	9264	14447	14506	33466	33466					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2239257693291	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.338	1	62.667	62.167	63.167	0.32974								0	0	0	0.42693	1	26118	26118		1.0715	0	1		+		29173	9264	14447	14506	33467	33467					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2217590212822	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.585	1	67.908	67.408	68.408	0.32269								0	0	0	0.42693	1	28297	28297		1.0715	0	1		+		29174	9264	14447	14506	33468	33468					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2218810915947	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.505	1	72.83	72.33	73.33	0.32494								0	0	0	0.42693	1	30335	30335		0.26902	0	1		+		29175	9264	14447	14506	33469	33469					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2232543826103	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.893	1	92.083	91.583	92.583	0.19042								0	0	0	0.42693	1	38483	38483		1.0715	0	1		+		29176	9264	14447	14506	33470	33470					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2228881716728	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.498	1	97.589	97.089	98.089	0.090881								0	0	0	0.42693	1	40795	40795		1.0715	0	1		+		29177	9264	14447	14506	33471	33471					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2237426638603	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.749	1	84.937	84.437	85.437	1.1879								0	0	0	0.42693	1	35147	35147		1.0715	0	1		+		29178	9264	14447	14506	33472	33472					0.12766899127996112
RPLVPKVEV	9	Unmodified	_RPLVPKVEV_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2240478396416	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.255	1	92.236	91.736	92.736	0.98157								0	0	0	0.42693	1	38435	38435		1.0715	0	1		+		29179	9264	14447	14506	33473	33473					0.12766899127996112
RPMDLHVF	8	Unmodified	_RPMDLHVF_					0	0	0		ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	ENSG00000123384|ENST00000243077|LRP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.2948791384697	2	507.763112	1013.51167	1.0055	0.00051058	1.8281	0.00092823	2.8336	0.0014388	507.7636972899005	53.137	0.15997	54.538	54.442	54.602	1.4005					6	4	2	0	0	0	2.3239	1	22256	22256		12.532	0	1	721330			29180	2188	14448	14507	33474	33474					0.005455511195350482
RPPAAGAR	8	Unmodified	_RPPAAGAR_					0	0	0			REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2337524294853	2	398.232836	794.45112	0.23686	9.4324E-05	2.2593	0.00089971	2.4961	0.00099404	398.2342132839441	80.058	0.33936	80.058	79.826	80.165	0					14	10	2	0	0	0	0.88663	1	33344	33344		4.756	0	1	786390	+		29181	12578	14449	14508	33475	33475					0.04567201851455138
RPPAAGAR	8	Unmodified	_RPPAAGAR_					0	0	0			REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	398.232836	794.45112	0.23686	9.4324E-05	2.2593	0.00089971	2.4961	0.00099404	398.2342132839441	80.058	0.33936	80.058	79.826	80.165	0	-0.15357	0.0013507	NaN	4.756	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	786390	+		29182	12578	14449	14508							0.04567201851455138
RPPAAGAR	8	Unmodified	_RPPAAGAR_					0	0	0			REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	398.232836	794.45112	1.9048	0.00075855	1.6422	0.00065397	3.547	0.0014125	398.2336826103278	79.846	0.25385	80.147	80.004	80.258	0.30047	-0.064228	0.00085925	NaN	4.756	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408380	+		29183	12578	14449	14508							0.04567201851455138
RPPAAGAR	8	Unmodified	_RPPAAGAR_					0	0	0			REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	398.232836	794.45112	2.3254	0.00092603	0.39982	0.00015922	2.7252	0.0010853	398.2332419651113	78.998	0.40532	80.265	80.034	80.439	1.2668	0.053627	-0.00013024	NaN	4.756	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687540	+		29184	12578	14449	14508							0.04567201851455138
RPPAAGAR	8	Unmodified	_RPPAAGAR_					0	0	0			REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	REV__ENST00000440574.1_1_2:209120015-209120123:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	398.232836	794.45112	2.1603	0.0008603	-0.60503	-0.00024094	1.5553	0.00061936	398.2325573137652	78.64	0.27918	80.375	80.227	80.506	1.735	0.16417	-0.00093056	NaN	4.756	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369450	+		29185	12578	14449	14508							0.04567201851455138
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.7889892458916	2	530.787976	1059.5614	1.1782	0.00062539	-0.15914	-8.447E-05	1.0191	0.00054092	530.7880271415055	26.796	1.3534	26.796	26.535	27.889	0					149	44	7	0	0	0	0.02298	2	11161	11161;11212		96.936	48.59	1	23453000		+	29186	334	14450	14509	33476;33477	33476					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	354.1943237185478	3	354.194409	1059.5614	0.60674	0.0002149	-0.99579	-0.0003527	-0.38905	-0.0001378	354.1941113688252	26.229	1.3436	26.491	26.264	27.607	0.26173					106	43	4	0	0	0	0.023685	2	10990	10940;10990		88.364	42.624	1	9314700		+	29187	334	14450	14509	33478;33479	33479					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.7885009646416	2	530.787976	1059.5614	1.047	0.00055574	-0.34332	-0.00018223	0.70369	0.00037351	530.7879438507907	26.288	1.0962	26.549	26.295	27.391	0.26173					86	35	4	0	0	0	0.071837	1	10977	10977		59.368	27.063	1	7350700		+	29188	334	14450	14509	33480	33480					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7881957888603	2	530.787976	1059.5614	1.3773	0.00073107	-0.42401	-0.00022506	0.95332	0.00050601	530.7877814934767	25.03	1.7448	26.29	25.959	27.704	1.2594					161	56	4	0	0	0	0.03071	9	10471	10385;10431;10471;10522;10563;10616;10669;10737;10947		86.332	37.986	1	47032000		+	29189	334	14450	14509	33481;33482;33483;33484;33485;33486;33487;33488;33489	33483					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	354.1944763064384	3	354.194409	1059.5614	0.089212	3.1598E-05	-0.1344	-4.7603E-05	-0.045186	-1.6005E-05	354.19448497561876	25.03	2.1134	26.289	25.959	28.073	1.2594					204	68	5	0	0	0	0.015029	7	10603	10407;10458;10510;10561;10603;10656;10710		93.938	49.129	1	76764000		+	29190	334	14450	14509	33490;33491;33492;33493;33494;33495;33496	33494					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	354.1940795779228	3	354.194409	1059.5614	0.18421	6.5247E-05	-1.0072	-0.00035675	-0.823	-0.0002915	354.194114035261	24.636	1.0331	26.321	26.118	27.151	1.6845					94	34	4	0	0	0	0.043696	2	10286	10286;10345		67.081	37.24	1	4828100		+	29191	334	14450	14509	33497;33498	33497					0.03400002119838064
RPPGFSPFR	9	Unmodified	_RPPGFSPFR_					0	0	0		nc|ENSG00000113889|P01042-3|KNG1;nc|ENSG00000113889|P01042-2|KNG1;CON__P01045-1;CON__Q2KJ62;CON__P01044-1;ENSG00000113889|ENST00000644859|KNG1	nc|ENSG00000113889|P01042-3|KNG1	nc|ENSG00000113889|P01042-3|KNG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7884399294853	2	530.787976	1059.5614	0.81738	0.00043385	-0.10215	-5.4222E-05	0.71522	0.00037963	530.78809174911	24.691	0.96915	26.375	26.118	27.087	1.6845					72	32	3	0	0	0	0.066197	3	10294	10294;10337;10399		61.602	21.645	1	4899800		+	29192	334	14450	14509	33499;33500;33501	33499					0.03400002119838064
RPPGMMGVVV	10	Unmodified	_RPPGMMGVVV_					0	0	0		ENST00000310604.8_2_17:43138335-43138464:-|nuORF	ENST00000310604.8_2_17:43138335-43138464:-|nuORF	ENST00000310604.8_2_17:43138335-43138464:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.1893798708916	3	348.18939	1041.54634	0.10011	3.4857E-05	2.254	0.00078481	2.3541	0.00081967	348.1899123924941	24.995	0.48202	26.255	26.105	26.587	1.2594					29	15	3	0	0	0	0.62746	2	10494	10428;10494		13.615	2.7159	1	2052800			29193	5800	14451	14510	33502;33503	33503					0.027230509359924326
RPPKALLAE	9	Unmodified	_RPPKALLAE_					0	0	0		nc|ENSG00000205744|Q8IV53-2|DENND1C;ENSG00000205744|ENST00000381480|DENND1C	nc|ENSG00000205744|Q8IV53-2|DENND1C	nc|ENSG00000205744|Q8IV53-2|DENND1C	MSMS	GG20161007_CRH_Patient100_W632_02	4	332.2082397341728	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.413	1	89.86	89.36	90.36	1.4467								0	0	0	0.42693	1	37262	37262		1.0715	0	1				29194	5188	14452	14511	33504	33504					0.10006039576853709
RPPKKQLILL	10	Unmodified	_RPPKKQLILL_					0	0	0			REV__ENST00000475046.5_1_1:185270368-185270791:-|nuORF	REV__ENST00000475046.5_1_1:185270368-185270791:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4111205935478	2	603.408258	1204.80196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.61	1	108.77	108.27	109.27	0.15898								0	0	0	0.66264	1	46999	46999		0	0	1		+		29195	13311	14453	14512	33505	33505					0.20775398387240784
RPPKKQLILL	10	Unmodified	_RPPKKQLILL_					0	0	0			REV__ENST00000475046.5_1_1:185270368-185270791:-|nuORF	REV__ENST00000475046.5_1_1:185270368-185270791:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4118530154228	2	603.408258	1204.80196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.71	1	108.87	108.37	109.37	0.15898								0	0	0	0.66264	1	47064	47064		0	0	1		+		29196	13311	14453	14512	33506	33506					0.20775398387240784
RPPKPVPL	8	Unmodified	_RPPKPVPL_					0	0	0		ENST00000607241.1_1_2:9696254-9696722:+|nuORF	ENST00000607241.1_1_2:9696254-9696722:+|nuORF	ENST00000607241.1_1_2:9696254-9696722:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2954894900322	2	452.292362	902.570172	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.151	1	57.56	57.06	58.06	1.4099								0	0	0	1.0178	1	23531	23531		2.3027	0	1				29197	7566	14454	14513	33507	33507					0.11498975756330765
RPPLAEPL	8	Unmodified	_RPPLAEPL_					0	0	0			REV__ENST00000372683.1_1_1:41107422-41131088:-|nuORF	REV__ENST00000372683.1_1_1:41107422-41131088:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	447.2015258669853	2	446.766178	891.517802	3.2633	0.0014579	3.9795	0.0017779	7.2428	0.0032358	446.7677287647633	103.43	0.10071	103.49	103.46	103.56	0.059502					6	4	2	0	0	0	2.3239	1	43377	43377		2.5775	0	1	10804000	+		29198	12682	14455	14514	33508	33508					0.06770392622706822
RPPLRPLFRML	11	Unmodified	_RPPLRPLFRML_					0	0	0		ENST00000491948.5_1_22:24200072-24210829:+|nuORF	ENST00000491948.5_1_22:24200072-24210829:+|nuORF	ENST00000491948.5_1_22:24200072-24210829:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.9526855349541	3	465.951703	1394.83328	3.406	0.001587	-0.60564	-0.0002822	2.8003	0.0013048	465.95098393428094	96.665	0.15195	96.77	96.695	96.846	0.105					8	4	3	0	0	0	1.039	1	40459	40459		0.45452	0.046251	1	4045400			29199	6916	14456	14515	33509	33509					0.1516564814967296
RPPLRPLFRML	11	Unmodified	_RPPLRPLFRML_					0	0	0		ENST00000491948.5_1_22:24200072-24210829:+|nuORF	ENST00000491948.5_1_22:24200072-24210829:+|nuORF	ENST00000491948.5_1_22:24200072-24210829:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	465.951703	1394.83328	1.8701	0.00087136	-2.8355	-0.0013212	-0.96542	-0.00044984	465.95138288729726	96.749	0.13836	96.749	96.634	96.772	0	-0.010481	-0.0022323	NaN	0.45452	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1233600			29200	6916	14456	14515							0.1516564814967296
RPPRDVRRR	9	Unmodified	_RPPRDVRRR_					0	0	0		ENST00000263253.8_1_22:41488148-41488439:+|nuORF	ENST00000263253.8_1_22:41488148-41488439:+|nuORF	ENST00000263253.8_1_22:41488148-41488439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	403.2475768923759	3	403.246278	1206.717	2.7831	0.0011223	-0.2911	-0.00011738	2.492	0.0010049	403.24620195643837	92.355	0.55689	92.523	92.249	92.806	0.16835					60	17	5	0	0	0	0.85019	1	38649	38649		0.23584	0	1	17671000			29201	5641	14457	14516	33510	33510					0.12191465693967984
RPPRLRLRAR	10	Unmodified	_RPPRLRLRAR_					0	0	0			REV__ENST00000439120.1_1_7:26438220-26438307:+|nuORF	REV__ENST00000439120.1_1_7:26438220-26438307:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	324.2021972537041	4	323.463999	1289.82689	0.98753	0.00031943	-0.7894	-0.00025534	0.19813	6.4087E-05	323.4630559122602	39.565	0.25233	39.877	39.767	40.019	0.31263					12	7	2	0	0	0	0.12561	1	16678	16678		0	0	1	510810	+		29202	13073	14458	14517	33511	33511					0.1935689103313507
RPPVKETE	8	Unmodified	_RPPVKETE_					0	0	0			REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	REV__nc|ENSG00000089472|Q9BQS7-2|HEPH	MSMS	GG20161007_CRH_Patient100_A02_02	2	478.2655517458916	2	478.263999	954.513445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.1	1	105.15	104.65	105.65	0.056801								0	0	0	1.0178	1	44483	44483		0.69038	0	1		+		29203	14401	14459	14518	33512	33512					0.034368834091424105
RPPVKKLLEML	11	Unmodified	_RPPVKKLLEML_					0	0	0		ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	ENSG00000165661|ENST00000358701|QSOX2	MSMS	GG20161007_CRH_Patient100_W632_02	4	662.4180175662041	2	662.412683	1322.81081	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.88	1	110.03	109.53	110.53	0.15228								0	0	0	0.63775	1	47659	47659		1.1933	0.79263	1				29204	3851	14460	14519	33513	33513					0.16232003961363262
RPPVNRLLS	9	Unmodified	_RPPVNRLLS_					0	0	0			REV__ENST00000440595.5_1_20:32580682-32582022:-|nuORF	REV__ENST00000440595.5_1_20:32580682-32582022:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2179748415947	3	351.217214	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.75	1	100.82	100.32	101.32	0.067009								0	0	0	0.42693	1	42181	42181		2.4985	0	1		+		29205	13081	14461	14520	33514	33514					0.10652246699692114
RPPVNRLLS	9	Unmodified	_RPPVNRLLS_					0	0	0			REV__ENST00000440595.5_1_20:32580682-32582022:-|nuORF	REV__ENST00000440595.5_1_20:32580682-32582022:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2166625857353	3	351.217214	1050.62981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.64	1	100.82	100.32	101.32	0.18047								0	0	0	0.42693	1	42348	42348		2.4985	0	1		+		29206	13081	14461	14520	33515	33515					0.10652246699692114
RPPWARIR	8	Unmodified	_RPPWARIR_					0	0	0			REV__chr8:143990315-143991200|398|12.01|0.34|5.12|+|2|None,GRINA|1	REV__chr8:143990315-143991200|398|12.01|0.34|5.12|+|2|None,GRINA|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2169372439384	3	351.213915	1050.61992	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.8	1	101.87	101.37	102.37	0.067009								0	0	0	1.0178	1	42623	42623		0.40072	0	1		+		29207	8344	14462	14521	33516	33516					0.09663103484967905
RPQLIGPRII	10	Unmodified	_RPQLIGPRII_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2542907595634	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.893	1	29.669	29.169	30.169	1.7754								0	0	0	0.66254	1	11675	11675		0.15932	0	1		+		29208	11162	14463	14522	33517	33517					0.1602136817630253
RPQLIGPRII	10	Unmodified	_RPQLIGPRII_					0	0	0			REV__ENSG00000175820|ENST00000322527|CCDC168	REV__ENSG00000175820|ENST00000322527|CCDC168	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2550536990166	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.163	1	29.938	29.438	30.438	1.7754								0	0	0	0.66254	1	11790	11790		0.15932	0	1		+		29209	11162	14463	14522	33518	33518					0.1602136817630253
RPQLIRAK	8	Unmodified	_RPQLIRAK_					0	0	0		nc|ENSG00000164329|Q6PIY7-2|TENT2;ENSG00000164329|ENST00000453514|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	981.6351806521416	1	981.631609	980.624333	3.7979	0.0037281	0.36483	0.00035813	4.1627	0.0040862	981.631981003472	106.95	0.15501	107.11	107.01	107.17	0.15781					20	6	4	0	0	0	0.89178	1	45877	45877		0.69038	0	1	317370000			29210	3773	14464	14523	33519	33519					0.133245679078982
RPQLIRAK	8	Unmodified	_RPQLIRAK_					0	0	0		nc|ENSG00000164329|Q6PIY7-2|TENT2;ENSG00000164329|ENST00000453514|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	nc|ENSG00000164329|Q6PIY7-2|TENT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	981.6354858279228	1	981.631609	980.624333	3.3875	0.0033253	0.96039	0.00094275	4.3479	0.004268	981.6323266661248	106.93	0.15085	107.1	107	107.15	0.16174					20	6	4	0	0	0	0.89178	1	45810	45810		0.69038	0	1	217620000			29211	3773	14464	14523	33520	33520					0.133245679078982
RPRGPRSLL	9	Unmodified	_RPRGPRSLL_					0	0	0			REV__ENST00000560430.1_3_15:40400650-40400896:-|nuORF	REV__ENST00000560430.1_3_15:40400650-40400896:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3279907107353	2	526.327799	1050.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.376	1	98.632	98.132	99.132	0.25636								0	0	0	0.42693	1	41398	41398		1.8442	0.19162	1		+		29212	13896	14465	14524	33521	33521					0.11775068793849641
RPRKLRRELLW	11	Unmodified	_RPRKLRRELLW_					0	0	0			REV__ENST00000466480.1_1_1:114448336-114454776:+|nuORF	REV__ENST00000466480.1_1_1:114448336-114454776:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	762.5579711794853	2	761.975693	1521.93683	1.3377	0.0010193	0.22847	0.00017409	1.5662	0.0011934	761.9749433040861	105.8	0.097664	105.8	105.76	105.86	0					7	4	2	0	0	0	0.14606	1	44984	44984		0	0	1	4614200	+		29213	9523	14466	14525	33522	33522					0.19674271581698122
RPRKLRRELLW	11	Unmodified	_RPRKLRRELLW_					0	0	0			REV__ENST00000466480.1_1_1:114448336-114454776:+|nuORF	REV__ENST00000466480.1_1_1:114448336-114454776:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	761.975693	1521.93683	2.5161	0.0019172	-3.202	-0.0024399	-0.68595	-0.00052268	761.9724619476932	105.76	0.10841	105.91	105.85	105.96	0.15859	0.055367	-0.0013744	NaN	0	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26323000	+		29214	9523	14466	14525							0.19674271581698122
RPRLRWPVRRQ	11	Unmodified	_RPRLRWPVRRQ_					0	0	0			REV__ENSG00000142599.19,RERE,chr1,-,I22.1,8423667,8424014|112|11.6|1|intron	REV__ENSG00000142599.19,RERE,chr1,-,I22.1,8423667,8424014|112|11.6|1|intron	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.6449462771416	3	507.311282	1518.91202	2.9254	0.0014841	-1.6236	-0.00082365	1.3018	0.00066043	507.3107247037459	90.653	1.2725	90.862	90.081	91.354	0.20904					90	39	3	0	0	0	1.0402	1	38148	38148		0.08335	0.08335	1	1379600	+		29215	10181	14467	14526	33523	33523					0.17331636498943226
RPRLRWPVRRQ	11	Unmodified	_RPRLRWPVRRQ_					0	0	0			REV__ENSG00000142599.19,RERE,chr1,-,I22.1,8423667,8424014|112|11.6|1|intron	REV__ENSG00000142599.19,RERE,chr1,-,I22.1,8423667,8424014|112|11.6|1|intron	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	507.6449462771416	3	507.311282	1518.91202	2.9411	0.0014921	-2.752	-0.0013961	0.18907	9.5919E-05	507.3097086678315	91.464	0.71117	91.654	91.173	91.885	0.19042					33	21	2	0	0	0	0.14606	1	38148	38148		0.08335	0	1	699830	+		29216	10181	14467	14526	33524	33524					0.17331636498943226
RPRRLRVLRI	10	Unmodified	_RPRRLRVLRI_					0	0	0		ENST00000529943.6_1_16:31724582-31724693:+|nuORF	ENST00000529943.6_1_16:31724582-31724693:+|nuORF	ENST00000529943.6_1_16:31724582-31724693:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	667.9504272341728	2	667.952021	1333.88949	0.63294	0.00042278	-2.327	-0.0015543	-1.6941	-0.0011316	667.9500110520839	22.286	0.59057	22.509	22.259	22.85	0.223					53	19	4	0	0	0	0.89803	2	9214	9214;9268		0	0	1	9148100			29217	7156	14468	14527	33525;33526	33525					0.23590037101371308
RPRRRGARSL	10	Unmodified	_RPRRRGARSL_					0	0	0			REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	REV__ENST00000505521.1_1_5:177019227-177019656:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.9230529665947	3	408.921794	1223.74355	0.74149	0.00030321	1.3458	0.00055035	2.0873	0.00085356	408.9223501836721	92.462	0.54696	92.462	92.197	92.744	0					61	17	5	0	0	0	0.88314	1	38566	38566		1.5923	0	1	35869000	+		29218	13532	14469	14528	33527	33527					0.140631545853239
RPSKVRDRL	9	Unmodified	_RPSKVRDRL_					0	0	0		ENST00000436146.1_1_3:23959450-23960989:+|nuORF	ENST00000436146.1_1_3:23959450-23960989:+|nuORF	ENST00000436146.1_1_3:23959450-23960989:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2304260134697	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.484	1	71.484	70.984	71.984	0								0	0	0	0.42693	1	29770	29770		0.77653	0.078866	1				29219	6533	14470	14529	33528	33528					0.11526436476992785
RPSKVRDRL	9	Unmodified	_RPSKVRDRL_					0	0	0		ENST00000436146.1_1_3:23959450-23960989:+|nuORF	ENST00000436146.1_1_3:23959450-23960989:+|nuORF	ENST00000436146.1_1_3:23959450-23960989:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2342101931572	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.772	1	84.043	83.543	84.543	0.27029								0	0	0	0.42693	1	35037	35037		2.086	1.1237	1				29220	6533	14470	14529	33529	33529					0.11526436476992785
RPSLILDTVL	10	Unmodified	_RPSLILDTVL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2344543337822	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.922	1	84.183	83.683	84.683	0.26083								0	0	0	0.66178	1	35102	35102		1.4551	0	1				29221	3306	14471	14530	33530	33530					0.11794847091255178
RPSLILDTVL	10	Unmodified	_RPSLILDTVL_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;nc|ENSG00000151914|Q03001-14|DST;nc|ENSG00000151914|Q03001-8|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2356445193291	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.741	1	89.797	89.297	90.297	1.0562								0	0	0	0.66178	1	37409	37409		1.4551	0	1				29222	3306	14471	14530	33531	33531					0.11794847091255178
RPSPAKRRLS	10	Unmodified	_RPSPAKRRLS_					0	0	0		ENSG00000166848|ENST00000300086|TERF2IP	ENSG00000166848|ENST00000300086|TERF2IP	ENSG00000166848|ENST00000300086|TERF2IP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3590576052666	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89803	1	31729	31729		1.3295	0.63916	1	7390500			29223	3925	14472	14531	33532	33532					0.122941253683166
RPSRRRRRKRK	11	Unmodified	_RPSRRRRRKRK_					0	0	0			REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	REV__ENST00000467963.5_3_5:889215-891867:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	776.5030395388603	2	776.503807	1550.99306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.215	1	98.443	97.943	98.943	0.22776								0	0	0	0.63775	1	41336	41336		0	0	1		+		29224	13254	14473	14532	33533	33533					0.2396033726170117
RPTRLGFH	8	Unmodified	_RPTRLGFH_					0	0	0			REV__ENST00000585315.5_1_16:62070134-62070200:-|nuORF	REV__ENST00000585315.5_1_16:62070134-62070200:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	492.2822143435478	2	492.280318	982.546083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.92	1	92.11	91.61	92.61	0.19042								0	0	0	1.0178	1	38494	38494		0.79363	0	1		+		29225	14018	14474	14533	33534	33534					0.05411135322651717
RPVARSKIK	9	Unmodified	_RPVARSKIK_					0	0	0		ENSG00000125850|ENST00000278780|OVOL2;ENST00000483661.5_1_20:18005282-18039681:-|nuORF	ENSG00000125850|ENST00000278780|OVOL2	ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	352.2320434451103	3	352.232975	1053.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.213	1	87.213	86.713	87.713	0								0	0	0	0.42693	1	36423	36423		1.0715	0.67075	1				29226	2285	14475	14534	33535	33535					0.15240525970693852
RPVLIKARRC	10	Unmodified	_RPVLIKARRC_					0	0	0		ENST00000328747.11_1_7:64838810-64838879:+|nuORF	ENST00000328747.11_1_7:64838810-64838879:+|nuORF	ENST00000328747.11_1_7:64838810-64838879:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.6938964724541	4	303.693393	1210.74446	0.18258	5.5448E-05	1.2117	0.000368	1.3943	0.00042345	303.69369355675894	25.514	0.80056	25.766	25.151	25.951	0.25197					48	25	2	0	0	0	0.89803	1	10496	10496		0.77653	0	1	3340100			29227	5881	14476	14535	33536	33536					0.14752232910018392
RPVRRRRAP	9	Unmodified	_RPVRRRRAP_					0	0	0			REV__ENSG00000167702|ENST00000645548|KIFC2	REV__ENSG00000167702|ENST00000645548|KIFC2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1281310915947	3	388.583002	1162.72718	1.7238	0.00066985	-2.486	-0.00096602	-0.76217	-0.00029617	388.58172556296586	41.251	0.80447	41.568	41.264	42.068	0.31683					62	27	3	0	0	0	0.11941	1	17519	17519		1.0715	0	1	1548900	+		29228	10875	14477	14536	33537	33537					0.15232073419224434
RPVVILGPV	9	Unmodified	_RPVVILGPV_					0	0	0		nc|ENSG00000105289|O95049-5|TJP3;ENSG00000105289|ENST00000541714|TJP3;nc|ENSG00000105289|O95049-4|TJP3;nc|ENSG00000105289|O95049-3|TJP3	nc|ENSG00000105289|O95049-5|TJP3	nc|ENSG00000105289|O95049-5|TJP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	317.2113830447197	3	317.211289	948.612037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.14	1	104.14	103.64	104.64	0								0	0	0	0.42693	1	43899	43899		1.1933	0	1				29229	1508	14478	14537	33538	33538					0.1356753144486902
RPYRKGMEKS	10	Unmodified	_RPYRKGMEKS_					0	0	0		tr|A0A7D7A027|A0A7D7A027_9CLOTHDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22400PE=4SV=1	tr|A0A7D7A027|A0A7D7A027_9CLOTHDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22400PE=4SV=1	tr|A0A7D7A027|A0A7D7A027_9CLOTHDdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22400PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	417.9210998415947	3	417.892401	1250.65538	0.76103	0.00031803	-4.0063	-0.0016742	-3.2453	-0.0013562	417.8901240997298	29.395	0.39638	31.194	31.02	31.416	1.7987					23	12	3	0	0	0	0.12556	1	12377	12377		1.9064	1.6374	1	1157900			29230	17218	14479	14538	33539	33539					0.040073531598181944
RQADFVQVL	9	Unmodified	_RQADFVQVL_					0	0	0		nc|ENSG00000133103|Q9Y2V7-2|COG6;ENSG00000133103|ENST00000455146|COG6	nc|ENSG00000133103|Q9Y2V7-2|COG6	nc|ENSG00000133103|Q9Y2V7-2|COG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2993041872978	2	538.298373	1074.58219	1.9109	0.0010287	0.01104	5.9431E-06	1.922	0.0010346	538.2984229847424	43.333	0.50863	44.687	44.438	44.947	1.3536					53	16	4	0	0	0	0.053939	3	18158	18108;18158;18211		66.457	20.757	1	27399000			29231	2559	14480	14539	33540;33541;33542	33541					0.047885477088584594
RQADFVQVL	9	Unmodified	_RQADFVQVL_					0	0	0		nc|ENSG00000133103|Q9Y2V7-2|COG6;ENSG00000133103|ENST00000455146|COG6	nc|ENSG00000133103|Q9Y2V7-2|COG6	nc|ENSG00000133103|Q9Y2V7-2|COG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2996093630791	2	538.298373	1074.58219	1.9498	0.0010496	0.2181	0.0001174	2.1679	0.001167	538.2985310751336	42.678	0.48616	44.599	44.384	44.87	1.9211					47	15	4	0	0	0	0.070055	3	17882	17835;17882;17938		60.074	19.546	1	23951000			29232	2559	14480	14539	33543;33544;33545	33544					0.047885477088584594
RQAKIQRYKQK	11	Unmodified	_RQAKIQRYKQK_					0	0	0		ENSG00000089289|ENST00000356413|IGBP1	ENSG00000089289|ENST00000356413|IGBP1	ENSG00000089289|ENST00000356413|IGBP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2525817751884	4	362.471755	1445.85791	-1.5365	-0.00055693	0.52987	0.00019206	-1.0066	-0.00036487	362.47199420098667	9.7934	0.30778	10.444	10.337	10.644	0.65058					12	9	2	0	0	0	0.14606	1	4048	4048		0.094841	0	1	665130			29233	1124	14481	14540	33546	33546					0.15281999556714254
RQAKRPGM	8	Unmodified	_RQAKRPGM_					0	0	0			REV__ENST00000278559.7_1_11:76796081-76823747:+|nuORF	REV__ENST00000278559.7_1_11:76796081-76823747:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1780883669853	3	315.179994	942.518153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.779	1	87.779	87.279	88.279	0								0	0	0	1.0178	1	36689	36689		0.45834	0	1		+		29234	12249	14482	14541	33547	33547					0.04459489070916334
RQALSVLLLPW	11	Unmodified	_RQALSVLLLPW_					0	0	0		ENST00000522519.5_1_8:72875247-72964803:+|nuORF;ENST00000521467.5_1_8:72875247-72914501:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	ENST00000522519.5_1_8:72875247-72964803:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.5988647341728	3	432.599324	1294.77614	3.3224	0.0014373	-2.1749	-0.00094085	1.1476	0.00049644	432.5982909218583	95.12	0.39565	95.522	95.314	95.709	0.40208					54	16	4	0	0	0	1.0365	2	39988	39988;40032		1.2148	0.14337	1	6816700			29235	7083	14483	14542	33548;33549	33548					0.14054504144928615
RQANRLPIR	9	Unmodified	_RQANRLPIR_					0	0	0		ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	ENSG00000183779|ENST00000331569|ZNF703	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3442260622978	2	562.343981	1122.67341	1.2972	0.0007295	-0.025614	-1.4404E-05	1.2716	0.0007151	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.85019	1	30534	30534		0.52476	0	1	3980400			29236	4666	14484	14543	33550	33550					0.11697856196815337
RQAQCGGG	8	Unmodified	_RQAQCGGG_					0	0	0			REV__COL22A1|p.S20R|1|0.19|ENSG00000169436|chr8:138883113-138883113|A/T|missense_variant	REV__COL22A1|p.S20R|1|0.19|ENSG00000169436|chr8:138883113-138883113|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.6782409548759	2	388.677037	775.33952	2.2731	0.0008835	2.6002	0.0010106	4.8732	0.0018941	388.6777308760029	62.587	0.44769	64	63.807	64.254	1.4134					37	14	3	0	0	0	0.89178	1	26274	26274		0.69038	0	1	9791400	+		29237	8366	14485	14544	33551	33551					-0.05713600567969479
RQAQCGGG	8	Unmodified	_RQAQCGGG_					0	0	0			REV__COL22A1|p.S20R|1|0.19|ENSG00000169436|chr8:138883113-138883113|A/T|missense_variant	REV__COL22A1|p.S20R|1|0.19|ENSG00000169436|chr8:138883113-138883113|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.6785461306572	2	388.677037	775.33952	2.9332	0.0011401	1.4667	0.00057007	4.3998	0.0017101	388.6773616979795	62.194	0.51136	64.151	63.908	64.419	1.9571					36	16	3	0	0	0	0.89178	1	26107	26107		0.69038	0	1	5768200	+		29238	8366	14485	14544	33552	33552					-0.05713600567969479
RQATKKRKRKF	11	Unmodified	_RQATKKRKRKF_					0	0	0			REV__ENST00000606225.1_1_15:64464132-64481629:-|nuORF	REV__ENST00000606225.1_1_15:64464132-64481629:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2528869509697	4	362.48366	1445.90553	1.1439	0.00041464	-0.22591	-8.1887E-05	0.91799	0.00033276	362.985695969534	39.195	0.60309	40.491	40.29	40.893	1.2961					37	19	3	0	0	0	0.14606	1	16380	16380		0	0	1	695490	+		29239	10930	14486	14545	33553	33553					0.20041698547561282
RQDWFLWWKMR	11	Unmodified	_RQDWFLWWKMR_					0	0	0			REV__ENST00000557925.1_1_19:8315741-8320784:+|nuORF	REV__ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	826.5179931521416	2	826.419362	1650.82417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.222	1	97.528	97.028	98.028	0.3062								0	0	0	0.63775	1	40896	40896		0.30703	0	1		+		29240	13877	14487	14546	33554	33554					0.02479254793297514
RQFHSEPP	8	Unmodified	_RQFHSEPP_					0	0	0			REV__ENSG00000177992|ENST00000325643|SPATA31E1	REV__ENSG00000177992|ENST00000325643|SPATA31E1	MSMS	GG20161007_CRH_Patient100_W632_01	3	333.1673156619072	3	333.166519	996.477728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.62	1	96.041	95.541	96.541	0.4212								0	0	0	1.0178	1	40240	40240		0.45834	0	1		+		29241	11233	14488	14547	33555	33555					-0.02065154047852502
RQGQPILKHG	10	Unmodified	_RQGQPILKHG_					0	0	0			REV__ENST00000457967.1_1_1:113711848-113712022:+|nuORF	REV__ENST00000457967.1_1_1:113711848-113712022:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3311035037041	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.89803	2	31184	31184;31483		1.4819	1.4819	1	6327800	+		29242	13177	14489	14548	33556;33557	33556					0.0855074758567298
RQGQPILKHG	10	Unmodified	_RQGQPILKHG_					0	0	0			REV__ENST00000457967.1_1_1:113711848-113712022:+|nuORF	REV__ENST00000457967.1_1_1:113711848-113712022:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3309203982353	2	567.330539	1132.64652	2.4475	0.0013885	-0.92071	-0.00052235	1.5268	0.00086619	567.3297076976346	74.695	2.0427	75.02	74.233	76.275	0.32463					203	64	5	0	0	0	0.89803	2	31611	31611;31662		1.4819	0.68827	1	6803800	+		29243	13177	14489	14548	33558;33559	33558					0.0855074758567298
RQIIGPME	8	Unmodified	_RQIIGPME_					0	0	0			REV__ENSG00000185448|ENST00000346193|FAM47A	REV__ENSG00000185448|ENST00000346193|FAM47A	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2564575076103	2	472.25512	942.495686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.106	1	76.428	75.928	76.928	0.32163								0	0	0	1.0178	1	31830	31830		2.3027	0.24298	1		+		29244	11463	14490	14549	33560	33560					0.02213844882646754
RQIKVHDPGKL	11	Unmodified	_RQIKVHDPGKL_					0	0	0			REV__nc|ENSG00000155974|Q9Y3R0-2|GRIP1	REV__nc|ENSG00000155974|Q9Y3R0-2|GRIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	645.8864623904228	2	645.885678	1289.7568	2.5995	0.001679	-2.3772	-0.0015354	0.22228	0.00014357	645.884201692244	94.287	0.27927	94.432	94.261	94.54	0.14493					19	8	3	0	0	0	1.0366	1	39461	39461		1.1933	0	1	988930	+		29245	10505	14491	14550	33561	33561					0.12351547854018463
RQINWTVLY	9	Unmodified	_RQINWTVLY_					0	0	0		ENSG00000114391|ENST00000394077|RPL24;RPL24-MAP2K5|1|fusion	ENSG00000114391|ENST00000394077|RPL24	ENSG00000114391|ENST00000394077|RPL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8285400271416	2	596.827298	1191.64004	1.501	0.00089584	0.65078	0.0003884	2.1518	0.0012842	596.8276570002698	55.139	0.68888	56.544	56.272	56.96	1.4048					78	23	4	0	0	0	0.079895	2	23091	23043;23091		56.177	23.872	1	41567000			29246	1862	14492	14551	33562;33563	33563					0.05188809634296376
RQINWTVLY	9	Unmodified	_RQINWTVLY_					0	0	0		ENSG00000114391|ENST00000394077|RPL24;RPL24-MAP2K5|1|fusion	ENSG00000114391|ENST00000394077|RPL24	ENSG00000114391|ENST00000394077|RPL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8279296755791	2	596.827298	1191.64004	1.3663	0.00081547	0.28446	0.00016977	1.6508	0.00098524	596.8275201286707	54.685	0.696	56.654	56.409	57.105	1.9684					77	23	4	0	0	0	0.057024	3	22906	22857;22906;22959		65.235	25.278	1	39450000			29247	1862	14492	14551	33564;33565;33566	33565					0.05188809634296376
RQIRKKHRRRE	11	Unmodified	_RQIRKKHRRRE_					0	0	0			REV__ENST00000461933.1_1_3:169684610-169686205:+|nuORF	REV__ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.6578246951103	3	521.657341	1561.95019	2.129	0.0011106	-0.089468	-4.6672E-05	2.0395	0.0010639	521.6569125342382	45.264	0.72649	45.264	44.996	45.722	0					67	22	4	0	0	0	1.0405	2	18871	18871;18918		0	0	1	8585900	+		29248	13204	14493	14552	33567;33568	33567					0.1916952241360832
RQIRKKHRRRE	11	Unmodified	_RQIRKKHRRRE_					0	0	0			REV__ENST00000461933.1_1_3:169684610-169686205:+|nuORF	REV__ENST00000461933.1_1_3:169684610-169686205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	391.4951660037041	4	391.494825	1561.95019	1.0974	0.00042962	-0.13275	-5.197E-05	0.96464	0.00037765	391.4949225338448	42.908	2.0131	44.248	43.667	45.68	1.3399					250	64	5	0	0	0	1.0405	2	17856	17856;17895		0	0	1	133070000	+		29249	13204	14493	14552	33569;33570	33569					0.1916952241360832
RQKKLLKK	8	Unmodified	_RQKKLLKK_					0	0	0		nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1041.728808581829	1	1041.72551	1040.71823	1.2666	0.0013194	2.1375	0.0022266	3.404	0.0035461	1041.727436720069	106.28	0.31915	106.28	106.13	106.45	0					33	15	3	0	0	0	0.89198	1	45309	45309		0	0	1	24727000			29250	7932	14494	14553	33571	33571					0.1995028701019237
RQKKLLKK	8	Unmodified	_RQKKLLKK_					0	0	0		nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1041.729785144329	1	1041.72551	1040.71823	1.2664	0.0013193	1.4198	0.001479	2.6862	0.0027983	1041.726500307382	106.83	0.60065	106.83	106.34	106.94	0					74	28	3	0	0	0	0.89198	4	45396	45396;45491;45579;45647		0	0	1	107050000			29251	7932	14494	14553	33572;33573;33574;33575	33572					0.1995028701019237
RQKKLLKK	8	Unmodified	_RQKKLLKK_					0	0	0		nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	nc|ENSG00000174678|A6NHR8|FAM47DP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1041.727709949017	1	1041.72551	1040.71823	1.2665	0.0013193	1.427	0.0014866	2.6935	0.0028059	1041.7266300519123	107.24	0.64407	107.24	107	107.65	0					87	31	3	0	0	0	0.89198	3	45842	45842;45932;46026		0	0	1	44023000			29252	7932	14494	14553	33576;33577;33578	33576					0.1995028701019237
RQKKLMHKLQ	10	Unmodified	_RQKKLMHKLQ_					0	0	0		ENSG00000123171|ENST00000242819|CCDC70	ENSG00000123171|ENST00000242819|CCDC70	ENSG00000123171|ENST00000242819|CCDC70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2014648318291	4	328.202588	1308.78124	0.21303	6.9917E-05	-1.7481	-0.00057374	-1.5351	-0.00050382	328.20192904810114	34.893	0.14208	36.711	36.638	36.78	1.8176					24	11	3	0	0	0	0.88278	1	14615	14615		3.3196	0.68841	1	7588400			29253	2183	14495	14554	33579	33579					0.139204847359224
RQKPRDES	8	Unmodified	_RQKPRDES_					0	0	0			REV__KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant	REV__KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1805908083916	3	339.180828	1014.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.65	1	101.65	101.15	102.15	0								0	0	0	1.0178	1	42569	42569		1.6526	0	1		+		29254	8896	14496	14555	33580	33580					0.013976160095694468
RQKQQKKRKK	10	Unmodified	_RQKQQKKRKK_					0	0	0			REV__ENST00000607746.1_1_3:107854179-107855418:+|nuORF	REV__ENST00000607746.1_1_3:107854179-107855418:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	678.4415161013603	2	678.438944	1354.86333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.84	1	107.99	107.49	108.49	0.15795								0	0	0	0.6624	1	46438	46438		0.40072	0	1		+		29255	14143	14497	14556	33581	33581					0.20009723139196467
RQKRDRRRH	9	Unmodified	_RQKRDRRRH_					0	0	0			REV__nc|ENSG00000148408|Q00975-2|CACNA1B	REV__nc|ENSG00000148408|Q00975-2|CACNA1B	MSMS	GG20161007_CRH_Patient100_W632_01	3	654.3858520388603	2	654.385034	1306.75552	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.35	1	107.51	107.01	108.01	0.15781								0	0	0	0.42693	1	46155	46155		0.52476	0	1		+		29256	10346	14498	14557	33582	33582					0.11440771328489063
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.9818908572197	3	483.646776	1447.9185	1.5369	0.00074333	-0.14883	-7.1981E-05	1.3881	0.00067135	483.6466589249497	33.618	1.0711	33.618	33.39	34.462	0					107	34	4	0	0	0	0.89803	6	14027	14027;14078;14185;14237;14287;14340		0.13989	0.017027	1	18118000	+		29257	9231	14499	14558	33583;33584;33585;33586;33587;33588	33583					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9865295290947	4	362.986901	1447.9185	-1.0768	-0.00039088	-0.48776	-0.00017705	-1.5646	-0.00056793	362.9867618023066	36.01	0.74994	36.01	35.462	36.212	0					283	63	5	0	0	0	0.89803	1	15042	15042		0.13989	0	1	455320000	+		29258	9231	14499	14558	33589	33589					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	724.9677001833916	2	724.966526	1447.9185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.676	1	33.676	33.176	34.176	0								0	0	0	0.66161	1	14112	14112		3.5965	0.31518	1		+		29259	9231	14499	14558	33590	33590					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.6479064822197	3	483.646776	1447.9185	2.0424	0.00098782	-1.0213	-0.00049393	1.0212	0.00049389	483.64622361506014	32.585	1.105	32.879	32.528	33.633	0.29431					143	37	5	0	0	0	0.89803	2	13566	13566;13760		0.13989	0	1	27045000	+		29260	9231	14499	14558	33591;33592	33591					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9879333376884	4	362.986901	1447.9185	1.0375	0.00037658	-0.39245	-0.00014245	0.64501	0.00023413	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	0.89803	1	13601	13601		1.5923	0.48253	1	559590000	+		29261	9231	14499	14558	33593	33593					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.6472045779228	3	483.646776	1447.9185	0.76652	0.00037073	-0.073533	-3.5564E-05	0.69299	0.00033516	483.646612066779	31.477	1.0673	32.758	32.375	33.442	1.2813					111	35	5	0	0	0	0.89803	3	13146	13146;13364;13413		0.62683	0.48693	1	25713000	+		29262	9231	14499	14558	33594;33595;33596	33594					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9863159060478	4	362.986901	1447.9185	-0.66717	-0.00024217	-1.5151	-0.00054996	-2.1823	-0.00079214	362.98638335306435	33.626	0.3055	34.901	34.819	35.125	1.2746					115	32	5	0	0	0	0.89803	1	14185	14185		0.13989	0	1	279370000	+		29263	9231	14499	14558	33597	33597					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.9667846560478	2	724.966526	1447.9185	0.23911	0.00017335	0.661	0.00047921	0.90012	0.00065256	724.966102398085	30.819	0.55386	32.634	32.591	33.145	1.8151					27	18	4	0	0	0	0.89803	2	12988	12988;13066		0.40072	0	1	3397400	+		29264	9231	14499	14558	33598;33599	33598					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9876891970634	4	362.986901	1447.9185	0.47661	0.000173	-0.52083	-0.00018905	-0.04422	-1.6051E-05	362.9877963273164	30.842	1.2035	32.657	32.231	33.435	1.8151					129	40	6	0	0	0	0.89803	1	12993	12993		0.13989	0	1	538960000	+		29265	9231	14499	14558	33600	33600					0.21245574450313143
RQKRRRRKHK	10	Unmodified	_RQKRRRRKHK_					0	0	0			REV__nc|ENSG00000107404|O14640-2|DVL1	REV__nc|ENSG00000107404|O14640-2|DVL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	483.646776	1447.9185	2.0424	0.00098782	-1.0213	-0.00049393	1.0212	0.00049389	483.64622361506014	32.585	1.105	32.879	32.528	33.633	0.29431	0.12186	-0.00083653	NaN	0.62683	143	37	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27045000	+		29266	9231	14499	14558							0.21245574450313143
RQLDLEVD	8	Unmodified	_RQLDLEVD_					0	0	0			REV__ENSG00000276231|ENST00000619866|PIK3R6	REV__ENSG00000276231|ENST00000619866|PIK3R6	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.2605773806572	2	494.258914	986.503274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.02	1	103.08	102.58	103.58	0.062805								0	0	0	1.0178	1	43172	43172		2.5775	0	1		+		29267	12017	14500	14559	33601	33601					0.009482756839133799
RQLDMELVSV	10	Unmodified	_RQLDMELVSV_					0	0	0		ENSG00000089902|ENST00000262241|RCOR1;RCOR1-TECPR2|1|fusion	ENSG00000089902|ENST00000262241|RCOR1	ENSG00000089902|ENST00000262241|RCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.3193237185478	2	595.315906	1188.61726	2.3112	0.0013759	0.45861	0.00027302	2.7698	0.0016489	595.3178142412388	49.734	0.24931	51.126	50.98	51.229	1.3911					17	7	3	0	0	0	0.44353	1	20812	20812		30.703	3.8198	1	1177000			29268	1132	14501	14560	33602	33602					0.0304942245447819
RQLILLFH	8	Unmodified	_RQLILLFH_					0	0	0			REV__ENST00000473736.5_1_22:42172081-42174878:+|nuORF	REV__ENST00000473736.5_1_22:42172081-42174878:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2188903689384	3	347.218555	1038.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.918	1	44.242	43.742	44.742	0.32389								0	0	0	1.0178	1	18436	18436		3.9444	0	1		+		29269	10854	14502	14561	33603	33603					0.11606336193403877
RQLKLSIT	8	Unmodified	_RQLKLSIT_					0	0	0		ENST00000566284.1_1_16:57467902-57474840:-|nuORF;nc|ENSG00000005194|Q6FI81-3|CIAPIN1;ENSG00000005194|ENST00000394391|CIAPIN1	ENST00000566284.1_1_16:57467902-57474840:-|nuORF	ENST00000566284.1_1_16:57467902-57474840:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2066833376884	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.703	1	84.891	84.391	85.391	1.1879								0	0	0	1.0178	1	35128	35128		1.4819	0	1				29270	484	14503	14562	33604	33604					0.11662039576845018
RQLKLSIT	8	Unmodified	_RQLKLSIT_					0	0	0		ENST00000566284.1_1_16:57467902-57474840:-|nuORF;nc|ENSG00000005194|Q6FI81-3|CIAPIN1;ENSG00000005194|ENST00000394391|CIAPIN1	ENST00000566284.1_1_16:57467902-57474840:-|nuORF	ENST00000566284.1_1_16:57467902-57474840:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2072021365166	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.337	1	85.496	84.996	85.996	1.159								0	0	0	1.0178	1	35391	35391		1.4819	0	1				29271	484	14503	14562	33605	33605					0.11662039576845018
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2384826540947	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.729	1	92.898	92.398	93.398	0.16835								0	0	0	1.0178	1	38831	38831		0.40072	0	1		+		29272	14001	14504	14563	33606	33606					0.15259348064842015
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2384216189384	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.786	1	87.878	87.378	88.378	1.0918								0	0	0	1.0178	1	36590	36590		0.40072	0	1		+		29273	14001	14504	14563	33607	33607					0.15259348064842015
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2390319705009	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.577	1	91.943	91.443	92.443	1.366								0	0	0	1.0178	1	38148	38148		0.40072	0	1		+		29274	14001	14504	14563	33608	33608					0.15259348064842015
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2392455935478	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.738	1	92.104	91.604	92.604	1.366								0	0	0	1.0178	1	38212	38212		0.40072	0	1		+		29275	14001	14504	14563	33609	33609					0.15259348064842015
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2391235232353	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.913	1	92.279	91.779	92.779	1.366								0	0	0	1.0178	1	38285	38285		0.40072	0	1		+		29276	14001	14504	14563	33610	33610					0.15259348064842015
RQLLHKRK	8	Unmodified	_RQLLHKRK_					0	0	0			REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	REV__ENST00000581444.5_1_18:20956852-20964997:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2391235232353	3	360.23672	1077.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.835	1	94.112	93.612	94.612	1.277								0	0	0	1.0178	1	39069	39069		0.40072	0	1		+		29277	14001	14504	14563	33611	33611					0.15259348064842015
RQLLLEGVPV	10	Unmodified	_RQLLLEGVPV_					0	0	0		ENSG00000104356|ENST00000401707|POP1	ENSG00000104356|ENST00000401707|POP1	ENSG00000104356|ENST00000401707|POP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3447753787041	2	562.345323	1122.67609	1.2972	0.0007295	-2.4132	-0.0013571	-1.116	-0.00062757	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.87343	1	30287	30287		4.3292	0	1	3980400			29278	1459	14505	14564	33612	33612					0.11966266811123205
RQLLPLPLHLL	11	Unmodified	_RQLLPLPLHLL_					0	0	0			REV__ENST00000517565.1_1_7:143510599-143510839:-|nuORF	REV__ENST00000517565.1_1_7:143510599-143510839:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2889587283134	3	438.286969	1311.83908	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.51	1	105.56	105.06	106.06	0.056801								0	0	0	0.63775	1	44745	44745		0.094841	0	1		+		29279	13607	14506	14565	33613	33613					0.19563069932996768
RQLRKRKQKY	10	Unmodified	_RQLRKRKQKY_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.6277038455009	3	468.628388	1402.86333	2.4013	0.0011253	-2.8461	-0.0013337	-0.44474	-0.00020842	468.6272767909419	92.788	0.4536	92.788	92.559	93.013	0					21	14	2	0	0	0	0.89803	1	38803	38803		0.69767	0.53834	1	1613600			29280	3367	14507	14566	33614	33614					0.17801723139200476
RQLRKRKQKY	10	Unmodified	_RQLRKRKQKY_					0	0	0		nc|ENSG00000153832|Q8NEA4-3|FBXO36;ENSG00000153832|ENST00000283946|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	nc|ENSG00000153832|Q8NEA4-3|FBXO36	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	468.628388	1402.86333	4.34	0.0020339	-2.7893	-0.0013072	1.5507	0.00072671	468.6268791787667	92.027	0.31348	92.963	92.769	93.082	0.93624	0.1013	0.00016908	NaN	0.69767	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	424800			29281	3367	14507	14566							0.17801723139200476
RQLRRRWRRRR	11	Unmodified	_RQLRRRWRRRR_					0	0	0			REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	848.0323364138603	2	848.02798	1694.04141	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.072	1	98.299	97.799	98.799	0.22776								0	0	0	0.63775	1	41274	41274		0	0	1		+		29282	14098	14508	14567	33615	33615					0.22214830901589266
RQNEEPRQ	8	Unmodified	_RQNEEPRQ_					0	0	0		sp|Q6SWB8|UL13_HCMVMUncharacterizedproteinUL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL13PE=3SV=1;sp|P16755|UL13_HCMVAUncharacterizedproteinUL13OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL13PE=1SV=1	sp|Q6SWB8|UL13_HCMVMUncharacterizedproteinUL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL13PE=3SV=1	sp|Q6SWB8|UL13_HCMVMUncharacterizedproteinUL13OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL13PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.3788329958916	2	528.762686	1055.51082	3.1538	0.0016676	2.8634	0.0015141	6.0173	0.0031817	529.2656298634737	101.86	0.14925	102.03	101.96	102.11	0.17032					7	4	2	0	0	0	2.3239	1	42831	42831		1.8442	0	1	9044100			29283	15994	14509	14568	33616	33616					-0.014715719958076079
RQNRRKQLLFQ	11	Unmodified	_RQNRRKQLLFQ_					0	0	0			REV__ENST00000342992.10_3_2:179510673-179515519:-|nuORF	REV__ENST00000342992.10_3_2:179510673-179515519:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	495.8005554080009	3	496.295297	1485.86406	4.7194	0.0023422	-4.0722	-0.002021	0.64721	0.00032121	496.29297642005713	87.664	0.40443	88.756	88.553	88.958	1.0918					16	12	2	0	0	0	0.14606	1	37027	37027		1.2148	0.76031	1	981980	+		29284	12509	14510	14569	33617	33617					0.14056517788276324
RQPSPLLLL	9	Unmodified	_RQPSPLLLL_					0	0	0		CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant;CIC|p.V1007Afs*28|1|0.32|ENSG00000079432|chr19:42292310-42292322|GTGCAGTCAGCGG/-|frameshift_variant;ENSG00000079432|ENST00000681038|CIC	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2229492068291	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.575	1	77.575	77.075	78.075	0								0	0	0	0.42693	1	32294	32294		0.26902	0	1				29285	308	14511	14570	33618	33618					0.1276689912801885
RQPSPLLLL	9	Unmodified	_RQPSPLLLL_					0	0	0		CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant;CIC|p.V1007Afs*28|1|0.32|ENSG00000079432|chr19:42292310-42292322|GTGCAGTCAGCGG/-|frameshift_variant;ENSG00000079432|ENST00000681038|CIC	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2239868044853	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.921	1	89.144	88.644	89.644	0.22359								0	0	0	0.42693	1	37277	37277		0.26902	0	1				29286	308	14511	14570	33619	33619					0.1276689912801885
RQPSPLLLL	9	Unmodified	_RQPSPLLLL_					0	0	0		CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant;CIC|p.V1007Afs*28|1|0.32|ENSG00000079432|chr19:42292310-42292322|GTGCAGTCAGCGG/-|frameshift_variant;ENSG00000079432|ENST00000681038|CIC	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2231628298759	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.084	1	89.307	88.807	89.807	0.22359								0	0	0	0.42693	1	37343	37343		0.26902	0	1				29287	308	14511	14570	33620	33620					0.1276689912801885
RQPTRLTQGCM	11	Unmodified	_RQPTRLTQGCM_					0	0	0		PHLDB1|p.P441Lfs*20|1|0.05|ENSG00000019144|chr11:118628144-118628144|C/-|frameshift_variant;nc|ENSG00000019144|Q86UU1-3|PHLDB1;nc|ENSG00000019144|Q86UU1-2|PHLDB1;ENSG00000019144|ENST00000600882|PHLDB1	PHLDB1|p.P441Lfs*20|1|0.05|ENSG00000019144|chr11:118628144-118628144|C/-|frameshift_variant	PHLDB1|p.P441Lfs*20|1|0.05|ENSG00000019144|chr11:118628144-118628144|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877746462822	3	430.88503	1289.63326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.68	1	110.84	110.34	111.34	0.15228								0	0	0	0.63775	1	47988	47988		0.08335	0	1				29288	608	14512	14571	33621	33621					2.8054197173332796E-05
RQQLVRLIFH	10	Unmodified	_RQQLVRLIFH_					0	0	0		Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	Harlequin-int_dup161|chr4:91353598-91357139:-|1.3911466287095282|0.2716421829311496|2.36|422.0|121|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2022277712822	4	328.201745	1308.77787	0.18251	5.9899E-05	1.2546	0.00041177	1.4371	0.00047167	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	0.89588	1	15470	15470		1.9064	0.45126	1	36142000			29289	7597	14513	14572	33622	33622					0.13583557953552372
RQQRRWQWVPV	11	Unmodified	_RQQRRWQWVPV_					0	0	0		ENST00000346169.6_1_3:184052699-184052807:+|nuORF	ENST00000346169.6_1_3:184052699-184052807:+|nuORF	ENST00000346169.6_1_3:184052699-184052807:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.6223022341728	3	513.619892	1537.83785	2.0912	0.0010741	2.5901	0.0013303	4.6814	0.0024044	513.6210703515651	44.365	1.6546	44.365	44.131	45.786	0					94	52	4	0	0	0	1.0365	1	18516	18516		1.2148	0.36989	1	7445100			29290	5964	14514	14573	33623	33623					0.09044248616760342
RQQVDTSGDH	10	Unmodified	_RQQVDTSGDH_					0	0	0			REV__ENSG00000233024|ENST00000427999|NPIPA9	REV__ENSG00000233024|ENST00000427999|NPIPA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.5125915408134	3	381.511014	1141.51121	-0.090453	-3.4509E-05	0.58938	0.00022485	0.49892	0.00019035	381.51156702553504	18.475	1.5676	19.454	19.147	20.715	0.97922					90	52	2	0	0	0	0.78179	1	8060	8060		14.218	0.6033	1	1319900	+		29291	11392	14515	14574	33624	33624					-0.05388197066599787
RQQVDTSGDH	10	Unmodified	_RQQVDTSGDH_					0	0	0			REV__ENSG00000233024|ENST00000427999|NPIPA9	REV__ENSG00000233024|ENST00000427999|NPIPA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5090820193291	3	381.511014	1141.51121	-0.21251	-8.1076E-05	-0.49407	-0.00018849	-0.70659	-0.00026957	381.5109626703383	1.2417	1.2917	1.9901	1.6526	2.9443	0.7484					120	78	3	0	0	0	0.85617	1	540	540		6.1918	0	1	689450	+		29292	11392	14515	14574	33625	33625					-0.05388197066599787
RQQVDTSGDH	10	Unmodified	_RQQVDTSGDH_					0	0	0			REV__ENSG00000233024|ENST00000427999|NPIPA9	REV__ENSG00000233024|ENST00000427999|NPIPA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5102111697197	3	381.511014	1141.51121	-0.21241	-8.1036E-05	-1.4887	-0.00056795	-1.7011	-0.00064899	381.51094896105184	5.5754	0.65984	6.3118	5.8902	6.5501	0.73642					74	46	3	0	0	0	0.85617	1	2151	2151		6.1918	3.1196	1	421560	+		29293	11392	14515	14574	33626	33626					-0.05388197066599787
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887512087822	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.2008	1	0.2008	-0.2992	0.7008	0								0	0	0	0.63775	1	82	82		0	0	1				29294	5777	14516	14575	33627	33627					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.51458	1	0.51458	0.014577	1.0146	0								0	0	0	0.63775	1	210	210		0	0	1				29295	5777	14516	14575	33628	33628					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.83642	1	0.83642	0.33642	1.3364	0								0	0	0	0.63775	1	343	343		0	0	1				29296	5777	14516	14575	33629	33629					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889343142509	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.94343	1	0.94343	0.44343	1.4434	0								0	0	0	0.63775	1	386	386		0	0	1				29297	5777	14516	14575	33630	33630					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0631	1	1.0631	0.56307	1.5631	0								0	0	0	0.63775	1	436	436		0	0	1				29298	5777	14516	14575	33631	33631					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2895	1	1.2895	0.78953	1.7895	0								0	0	0	0.63775	1	529	529		0	0	1				29299	5777	14516	14575	33632	33632					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.408	1	1.408	0.90795	1.908	0								0	0	0	0.63775	1	578	578		0	0	1				29300	5777	14516	14575	33633	33633					0.011725065496193565
RQRAGSHHGRE	11	Unmodified	_RQRAGSHHGRE_					0	0	0		ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	ENST00000306077.4_1_3:14166653-14170952:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890869021416	3	430.88893	1289.64496	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.535	1	1.535	1.035	2.035	0								0	0	0	0.63775	1	630	630		0	0	1				29301	5777	14516	14575	33634	33634					0.011725065496193565
RQRFRQFQYRE	11	Unmodified	_RQRFRQFQYRE_					0	0	0		nc|ENSG00000173275|Q6P9G9-3|ZNF449;nc|ENSG00000173275|Q6P9G9-2|ZNF449;ZNF449|p.M242Nfs*59|1|0.17|ENSG00000173275|chrX:135360236-135360237|-/A|frameshift_variant;ENSG00000173275|ENST00000339249|ZNF449	nc|ENSG00000173275|Q6P9G9-3|ZNF449	nc|ENSG00000173275|Q6P9G9-3|ZNF449	MSMS	GG20161007_CRH_Patient100_W632_01	3	807.4333984255791	2	807.424022	1612.83349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.165	1	90.185	89.685	90.685	1.0199								0	0	0	0.63775	1	37580	37580		0.30703	0.30703	1				29302	4277	14517	14576	33635	33635					0.051587394032139855
RQRFRQFQYRE	11	Unmodified	_RQRFRQFQYRE_					0	0	0		nc|ENSG00000173275|Q6P9G9-3|ZNF449;nc|ENSG00000173275|Q6P9G9-2|ZNF449;ZNF449|p.M242Nfs*59|1|0.17|ENSG00000173275|chrX:135360236-135360237|-/A|frameshift_variant;ENSG00000173275|ENST00000339249|ZNF449	nc|ENSG00000173275|Q6P9G9-3|ZNF449	nc|ENSG00000173275|Q6P9G9-3|ZNF449	MSMS	GG20161007_CRH_Patient100_W632_02	4	807.4320556521416	2	807.424022	1612.83349	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.746	1	90.192	89.692	90.692	1.4467								0	0	0	0.63775	1	37396	37396		0.30703	0.30703	1				29303	4277	14517	14576	33636	33636					0.051587394032139855
RQRPRRTA	8	Unmodified	_RQRPRRTA_					0	0	0		ENSG00000106246|ENST00000292478|PTCD1	ENSG00000106246|ENST00000292478|PTCD1	ENSG00000106246|ENST00000292478|PTCD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5459472537041	3	347.544324	1039.61114	1.6579	0.0005762	0.61632	0.0002142	2.2742	0.0007904	347.544108076771	40.544	0.56653	42.407	42.171	42.737	1.8624					32	17	2	0	0	0	0.88791	1	16923	16923		2.7352	0	1	5075200			29304	1560	14518	14577	33637	33637					0.09292129848518016
RQRREFREKRL	11	Unmodified	_RQRREFREKRL_					0	0	0		nc|ENSG00000104859|Q8N2M8-3|CLASRP;nc|ENSG00000104859|Q8N2M8-4|CLASRP;ENSG00000104859|ENST00000221455|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	525.3265258669853	3	525.309718	1572.90732	2.231	0.001172	0.25164	0.00013219	2.4826	0.0013041	525.309803870207	92.087	0.4062	92.087	91.852	92.258	0					17	12	2	0	0	0	0.14606	1	38464	38464		0	0	1	771380			29305	1483	14519	14578	33638	33638					0.14378707565538207
RQRREFREKRL	11	Unmodified	_RQRREFREKRL_					0	0	0		nc|ENSG00000104859|Q8N2M8-3|CLASRP;nc|ENSG00000104859|Q8N2M8-4|CLASRP;ENSG00000104859|ENST00000221455|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	nc|ENSG00000104859|Q8N2M8-3|CLASRP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3127929568291	3	525.309718	1572.90732	4.2348	0.0022246	0.026666	1.4008E-05	4.2615	0.0022386	525.6437103760492	93.254	1.0395	94.126	93.409	94.448	0.87176					43	31	2	0	0	0	1.0402	2	39230	39230;39317		0.094841	0	1	1179200			29306	1483	14519	14578	33639;33640	33639					0.14378707565538207
RQRRGAELV	9	Unmodified	_RQRRGAELV_					0	0	0			REV__chr1:16978314-16980951|243|24.65|0.22|6.82|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	REV__chr1:16978314-16980951|243|24.65|0.22|6.82|-|0|TE_info:MIRc,MIRc_dup612,MIR,SINE,donor,-,16980951,16981020|MFAP2,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	362.2171813845634	3	362.215984	1083.62612	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	104.11	103.61	104.61	0.16055								0	0	0	0.42693	1	43945	43945		1.1933	0	1		+		29307	8210	14520	14579	33641	33641					0.08765576925839014
RQRRKKRRN	9	Unmodified	_RQRRKKRRN_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2780944705009	3	433.27646	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.401	1	87.401	86.901	87.901	0								0	0	0	0.42693	1	36524	36524		0.23584	0	1		+		29308	10451	14521	14580	33642	33642					0.17101934742254343
RQRRRLRRRD	10	Unmodified	_RQRRRLRRRD_					0	0	0		ENST00000370944.8_1_1:70820336-70820381:-|nuORF	ENST00000370944.8_1_1:70820336-70820381:-|nuORF	ENST00000370944.8_1_1:70820336-70820381:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	734.4510375857353	2	734.45124	1466.88793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.688	1	98.768	98.268	99.268	0.080376								0	0	0	0.6624	1	41306	41306		0.40072	0	1				29309	6122	14522	14581	33643	33643					0.17315796065258837
RQSLLLRRK	9	Unmodified	_RQSLLLRRK_					0	0	0			REV__nc|ENSG00000131351|Q9BT25-2|HAUS8	REV__nc|ENSG00000131351|Q9BT25-2|HAUS8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1169.761279284954	1	1169.75894	1168.75166	3.0098	0.0035208	-1.1131	-0.001302	1.8967	0.0022187	1169.7575063323889	85.794	1.0478	87.342	86.536	87.584	1.547					154	43	4	0	0	0	0.84963	7	35745	35745;35808;35872;35938;36000;36133;36195		0.6015	0	1	203320000	+		29310	9817	14523	14582	33644;33645;33646;33647;33648;33649;33650	33644					0.1740328878206583
RQSRPKKIGNR	11	Unmodified	_RQSRPKKIGNR_					0	0	0			REV__ENSG00000162244|ENST00000294189|RPL29	REV__ENSG00000162244|ENST00000294189|RPL29	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	447.2733032107353	3	447.272493	1338.79565	3.2382	0.0014484	-0.95482	-0.00042706	2.2834	0.0010213	447.2716052968581	96.665	0.21385	96.77	96.664	96.878	0.105					19	6	4	0	0	0	1.0388	1	40479	40479		0.50596	0.051438	1	26588000	+		29311	10637	14524	14583	33651	33651					0.1398027320840356
RQTKKKKRKLR	11	Unmodified	_RQTKKKKRKLR_					0	0	0		tr|A0A553SFS7|A0A553SFS7_NIACIRegulatoryproteinMsrROS=NialliacirculansOX=1397GN=CEQ21_09425PE=3SV=1	tr|A0A553SFS7|A0A553SFS7_NIACIRegulatoryproteinMsrROS=NialliacirculansOX=1397GN=CEQ21_09425PE=3SV=1	tr|A0A553SFS7|A0A553SFS7_NIACIRegulatoryproteinMsrROS=NialliacirculansOX=1397GN=CEQ21_09425PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	735.4965698122978	2	735.496793	1468.97903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.51	1	108.51	108.01	109.01	0								0	0	0	0.63775	1	46770	46770		0	0	1				29312	16077	14525	14584	33652	33652					0.2633024699002817
RQTLKLLSRP	10	Unmodified	_RQTLKLLSRP_					0	0	0		ENSG00000103932|ENST00000304330|RPAP1;nc|ENSG00000103932|Q9BWH6-2|RPAP1;nc|ENSG00000103932|Q9BWH6-3|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.6936523318291	4	303.695024	1210.75099	-2.8882	-0.00087712	-2.3488	-0.00071331	-5.2369	-0.0015904	303.69440317953496	26.74	1.5721	26.74	25.748	27.321	0					119	51	3	0	0	0	0.8974	1	10985	10985		1.7423	0	1	5068100			29313	1444	14526	14585	33653	33653					0.15404449342349835
RQTVLREKGRR	11	Unmodified	_RQTVLREKGRR_					0	0	0		TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant;nc|ENSG00000137672|Q9Y210-2|TRPC6;nc|ENSG00000137672|Q9Y210-3|TRPC6;ENSG00000137672|ENST00000344327|TRPC6	TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant	TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9547302126884	3	466.951531	1397.83276	1.9336	0.00090289	2.846	0.001329	4.7796	0.0022319	466.9526199361326	96.443	0.39682	96.443	96.206	96.602	0					16	12	2	0	0	0	1.0254	1	40284	40284		2.2527	1.7468	1	809330			29314	2782	14527	14586	33654	33654					0.14975944754132797
RQTVLREKGRR	11	Unmodified	_RQTVLREKGRR_					0	0	0		TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant;nc|ENSG00000137672|Q9Y210-2|TRPC6;nc|ENSG00000137672|Q9Y210-3|TRPC6;ENSG00000137672|ENST00000344327|TRPC6	TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant	TRPC6|p.I584Tfs*7|1|0.03|ENSG00000137672|chr11:101473767-101473768|-/GAAGGGTACAGGAAGTG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	466.951531	1397.83276	3.4091	0.0015919	0.72617	0.00033908	4.1352	0.001931	466.95149845557626	96.469	0.28549	96.574	96.319	96.604	0.105	0.065251	-0.0013204	NaN	2.2527	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1182400			29315	2782	14527	14586							0.14975944754132797
RQTWFRWRRMR	11	Unmodified	_RQTWFRWRRMR_					0	0	0			REV__chr19:14537143-14562525|88|78.34|0.84|6.55|+|1|None,TECR|1	REV__chr19:14537143-14562525|88|78.34|0.84|6.55|+|1|None,TECR|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3056518435478	3	560.30391	1677.8899	0.8538	0.00047839	-1.5036	-0.00084249	-0.64984	-0.00036411	560.3035783178278	30.292	0.24666	31.574	31.441	31.687	1.2825					16	7	3	0	0	0	1.0405	1	12739	12739		0	0	1	1035500	+		29316	8285	14528	14587	33655	33655					0.07807088758863756
RQVALRAG	8	Unmodified	_RQVALRAG_					0	0	0		ENST00000368653.7_1_10:129923864-129924401:-|nuORF	ENST00000368653.7_1_10:129923864-129924401:-|nuORF	ENST00000368653.7_1_10:129923864-129924401:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7680541872978	2	435.767043	869.519533	1.6863	0.00073481	0.50806	0.0002214	2.1943	0.00095621	435.76690415837396	69.979	1.2957	70.301	69.752	71.048	0.32223					93	41	3	0	0	0	0.89051	1	29257	29257		2.3027	0	1	5043000			29317	6087	14529	14588	33656	33656					0.07955446431333257
RQVLPTPP	8	Unmodified	_RQVLPTPP_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6	REV__ENSG00000134115|ENST00000446702|CNTN6	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1829101443291	3	303.18351	906.528701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.756	1	99.829	99.329	100.33	0.072716								0	0	0	1.0178	1	41770	41770		0.40072	0	1		+		29318	9893	14530	14589	33657	33657					0.07169794996980272
RQVPRKPR	8	Unmodified	_RQVPRKPR_					0	0	0		ENST00000597086.1_19:21265051-21281007:+|nuORF;ENST00000597424.1_19:21265051-21299657:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2218200564384	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.217	1	76.539	76.039	77.039	0.32163								0	0	0	1.0178	1	31879	31879		0.45834	0	1				29319	7523	14531	14590	33658	33658					0.12498488513710981
RQVPRKPR	8	Unmodified	_RQVPRKPR_					0	0	0		ENST00000597086.1_19:21265051-21281007:+|nuORF;ENST00000597424.1_19:21265051-21299657:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2229186892509	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.599	1	76.921	76.421	77.421	0.32163								0	0	0	1.0178	1	32037	32037		0.45834	0	1				29320	7523	14531	14590	33659	33659					0.12498488513710981
RQVPRKPR	8	Unmodified	_RQVPRKPR_					0	0	0		ENST00000597086.1_19:21265051-21281007:+|nuORF;ENST00000597424.1_19:21265051-21299657:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2226745486259	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.735	1	77.051	76.551	77.551	0.31653								0	0	0	1.0178	1	32092	32092		0.45834	0	1				29321	7523	14531	14590	33660	33660					0.12498488513710981
RQVPRKPR	8	Unmodified	_RQVPRKPR_					0	0	0		ENST00000597086.1_19:21265051-21281007:+|nuORF;ENST00000597424.1_19:21265051-21299657:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	ENST00000597086.1_19:21265051-21281007:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2240783572197	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.053	1	77.37	76.87	77.87	0.31653								0	0	0	1.0178	1	32223	32223		0.45834	0	1				29322	7523	14531	14590	33661	33661					0.12498488513710981
RQVRKLAKVR	10	Unmodified	_RQVRKLAKVR_					0	0	0			REV__nc|ENSG00000197603|Q9H799-5|CPLANE1	REV__nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.4261352419853	2	627.41748	1252.82041	2.8807	0.0018074	-0.056832	-3.5657E-05	2.8239	0.0017717	627.4173728899001	105.93	0.23254	106.08	105.91	106.14	0.15859					30	11	5	0	0	0	0.89803	1	45157	45157		0.45834	0	1	345560000	+		29323	11682	14532	14591	33662	33662					0.20410953081773187
RRAAAAPP	8	Unmodified	_RRAAAAPP_					0	0	0			REV__ENST00000396901.5_2_19:36389387-36389702:-|nuORF	REV__ENST00000396901.5_2_19:36389387-36389702:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2413513064384	2	405.240661	808.46677	1.9728	0.00079948	-0.48166	-0.00019519	1.4912	0.00060429	405.2403264425708	66.91	1.0268	67.234	66.811	67.838	0.32449					59	33	2	0	0	0	0.89178	1	27988	27988		0.69038	0	1	4085200	+		29324	12856	14533	14592	33663	33663					0.05487488368498816
RRAAAPSP	8	Unmodified	_RRAAAPSP_					0	0	0			REV__ENST00000309575.4_1_3:142838295-142838649:+|nuORF	REV__ENST00000309575.4_1_3:142838295-142838649:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2385131716728	2	413.238119	824.461684	1.5009	0.00062023	-0.85831	-0.00035469	0.64258	0.00026554	413.23797841867287	70.48	0.42828	72.318	72.104	72.532	1.8378					31	13	3	0	0	0	0.89051	1	29621	29621		2.3027	0	1	4427700	+		29325	12354	14534	14593	33664	33664					0.04243184505889985
RRAALSPR	8	Unmodified	_RRAALSPR_					0	0	0		ENST00000451174.1_3_14:45719285-45722361:-|nuORF;ENST00000310806.8_1_14:45716533-45722412:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	ENST00000451174.1_3_14:45719285-45722361:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	309.52627	925.556982	-2.9637	-0.00091735	-2.2402	-0.00069339	-5.2039	-0.0016107	309.52553967836457	24.936	0.39763	24.936	24.734	25.132	0					34	12	4	0	0	0	2.3239	1	10476	10476		0.40072	0	1	7903300			29326	5804	14535	14594	33665	33665					0.09122537696930522
RRAGPALA	8	Unmodified	_RRAGPALA_					0	0	0			REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2487975955009	2	406.248486	810.48242	1.4021	0.00056961	-0.4833	-0.00019634	0.91883	0.00037328	406.24831900624537	70.284	1.3955	70.606	70.002	71.397	0.32224					109	44	5	0	0	0	0.89198	2	29419	29419;29472		0	0	1	292300000	+		29327	12257	14536	14595	33666;33667	33666					0.06959774885535808
RRAGPALA	8	Unmodified	_RRAGPALA_					0	0	0			REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	REV__ENST00000281961.2_1_2:39893203-39931290:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	406.2489196658134	2	406.248486	810.48242	1.7385	0.00070628	-0.82407	-0.00033478	0.91447	0.0003715	406.24806802033487	69.349	1.0912	70.715	70.381	71.472	1.3657					90	35	5	0	0	0	0.89198	2	29081	29081;29133		0	0	1	128900000	+		29328	12257	14536	14595	33668;33669	33668					0.06959774885535808
RRAHRPWIFL	10	Unmodified	_RRAHRPWIFL_					0	0	0			REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	676.3969604372978	2	676.396548	1350.77854	2.8869	0.0019527	0.60234	0.00040742	3.4893	0.0023601	676.3963516610149	107.3	0.094284	107.46	107.41	107.51	0.15781					13	4	4	0	0	0	0.89803	1	46127	46127		1.6526	0.45928	1	53562000	+		29329	13834	14537	14596	33670	33670					0.1171839739324696
RRAHRPWIFL	10	Unmodified	_RRAHRPWIFL_					0	0	0			REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	676.396548	1350.77854	1.4619	0.00098884	6.3156	0.0042718	7.7775	0.0052607	676.4017827706233	107.36	0.080383	107.36	107.31	107.39	0	-0.067564	0.0068883	NaN	1.6526	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4993200	+		29330	13834	14537	14596							0.1171839739324696
RRAHRPWIFL	10	Unmodified	_RRAHRPWIFL_					0	0	0			REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	676.396548	1350.77854	2.8869	0.0019527	0.60234	0.00040742	3.4893	0.0023601	676.3963516610149	107.3	0.094284	107.46	107.41	107.51	0.15781	0.034142	-0.00084048	NaN	1.6526	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53562000	+		29331	13834	14537	14596							0.1171839739324696
RRAHRPWIFL	10	Unmodified	_RRAHRPWIFL_					0	0	0			REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	REV__ENST00000552019.1_1_14:105993550-105993691:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	676.396548	1350.77854	2.8566	0.0019322	-0.26071	-0.00017634	2.5959	0.0017558	676.3965669513517	107.3	0.13069	107.46	107.39	107.52	0.15795	0.033422	-0.002008	NaN	1.6526	15	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	103220000	+		29332	13834	14537	14596							0.1171839739324696
RRALLLKK	8	Unmodified	_RRALLLKK_					0	0	0		ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	ENSG00000185608|ENST00000333130|MRPL40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	997.7014037966728	1	997.699295	996.692019	1.2185	0.0012157	1.0391	0.0010368	2.2576	0.0022524	997.6999083914461	107.24	0.80305	107.24	107	107.81	0					97	40	3	0	0	0	0.89198	5	45843	45843;45933;45999;46077;46151		0	0	1	41758000			29333	4751	14538	14597	33671;33672;33673;33674;33675	33671					0.19354017838713844
RRAPRRRRC	9	Unmodified	_RRAPRRRRC_					0	0	0			REV__ENST00000323534.4_2_3:152880205-152880379:+|nuORF	REV__ENST00000323534.4_2_3:152880205-152880379:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.5820800662041	3	409.579374	1225.71629	3.9716	0.0016267	2.2357	0.00091571	6.2073	0.0025424	409.58021769806885	90.194	0.59835	91.599	91.304	91.903	1.4045					36	18	2	0	0	0	0.82654	1	37986	37986		2.2828	0.19677	1	1282300	+		29334	12417	14539	14598	33676	33676					0.11246347773294474
RRAPRRYPD	9	Unmodified	_RRAPRRYPD_					0	0	0			REV__nc|ENSG00000114654|Q9HA90|EFCC1	REV__nc|ENSG00000114654|Q9HA90|EFCC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2243224978447	3	396.22325	1185.64792	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.484	1	89.708	89.208	90.208	0.22359								0	0	0	0.42693	1	37505	37505		1.1933	0	1		+		29335	9413	14540	14599	33677	33677					0.06252381674426033
RRAQRARRPWA	11	Unmodified	_RRAQRARRPWA_					0	0	0			REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	356.7118713259697	4	356.711805	1422.81812	1.4172	0.00050554	-2.8296	-0.0010094	-1.4124	-0.00050383	356.7108116029184	52.006	1.1029	52.332	51.85	52.953	0.32553					141	35	5	0	0	0	1.0191	1	21647	21647		2.6312	1.4164	1	24457000	+		29336	14164	14541	14600	33678	33678					0.12361917396697208
RRAQRARRPWA	11	Unmodified	_RRAQRARRPWA_					0	0	0			REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.7112304568291	4	356.711805	1422.81812	0.011432	4.0779E-06	-2.3861	-0.00085117	-2.3747	-0.00084709	356.96175954541644	50.838	1.1277	52.232	51.74	52.868	1.3938					128	36	4	0	0	0	1.0224	1	21124	21124		2.4348	0.8425	1	29728000	+		29337	14164	14541	14600	33679	33679					0.12361917396697208
RRAQRARRPWA	11	Unmodified	_RRAQRARRPWA_					0	0	0			REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	REV__GPR162|p.R209W|1|0.39|ENSG00000250510|chr12:6824523-6824523|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	356.7117492556572	4	356.711805	1422.81812	0.96185	0.0003431	-2.7783	-0.00099105	-1.8164	-0.00064794	356.71084561494786	50.264	1.1875	52.242	51.696	52.884	1.9772					120	38	4	0	0	0	1.0191	1	20889	20889		2.6312	1.4164	1	23258000	+		29338	14164	14541	14600	33680	33680					0.12361917396697208
RRARAVLA	8	Unmodified	_RRARAVLA_					0	0	0		nc|ENSG00000198933|A7MCY6-2|TBKBP1	nc|ENSG00000198933|A7MCY6-2|TBKBP1	nc|ENSG00000198933|A7MCY6-2|TBKBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8645507693291	3	304.866515	911.577717	-3.0627	-0.00093372	-2.6091	-0.00079543	-5.6718	-0.0017291	304.86573955712464	22.662	0.41145	22.662	22.517	22.928	0					32	13	3	0	0	0	0.89187	1	9433	9433		0.40072	0	1	10120000			29339	7971	14542	14601	33681	33681					0.11839128076587713
RRARPLRLVL	10	Unmodified	_RRARPLRLVL_					0	0	0		ENST00000397261.7_1_3:9834275-9834479:+|nuORF	ENST00000397261.7_1_3:9834275-9834479:+|nuORF	ENST00000397261.7_1_3:9834275-9834479:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1249.833422839642	1	1249.83277	1248.82549	2.7362	0.0034198	-3.711	-0.0046381	-0.97479	-0.0012183	1249.828505937312	108.03	0.069756	108.18	108.14	108.21	0.15781					10	9	2	0	0	0	0.89803	1	46603	46603		0.45834	0	1	36988000			29340	6308	14543	14602	33682	33682					0.21103256944388704
RRARRALRRR	10	Unmodified	_RRARRALRRR_					0	0	0		chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3010742068291	3	456.299488	1365.87663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.68	1	107.73	107.23	108.23	0.052452								0	0	0	0.66264	1	46115	46115		0	0	1				29341	294	14544	14603	33683	33683					0.20833018761777566
RRARRALRRR	10	Unmodified	_RRARRALRRR_					0	0	0		chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3009826540947	3	456.299488	1365.87663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.76	1	107.82	107.32	108.32	0.052452								0	0	0	0.66264	1	46178	46178		0	0	1				29342	294	14544	14603	33684	33684					0.20833018761777566
RRARRPQRV	9	Unmodified	_RRARRPQRV_					0	0	0		ENST00000555995.1_1_14:91755444-91755492:-|nuORF	ENST00000555995.1_1_14:91755444-91755492:-|nuORF	ENST00000555995.1_1_14:91755444-91755492:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8779785037041	2	597.873771	1193.73299	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.474	1	97.565	97.065	98.065	0.090881								0	0	0	0.42693	1	40785	40785		0.52476	0.066424	1				29343	7301	14545	14604	33685	33685					0.14387171930866316
RRARRRRLVFL	11	Unmodified	_RRARRRRLVFL_					0	0	0		nc|ENSG00000187260|Q86TI4-4|WDR86	nc|ENSG00000187260|Q86TI4-4|WDR86	nc|ENSG00000187260|Q86TI4-4|WDR86	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1283752322197	5	300.599137	1497.9593	-2.979	-0.00089549	1.1106	0.00033385	-1.8684	-0.00056164	300.5994268839993	24.594	0.18231	24.594	24.461	24.643	0					8	5	2	0	0	0	0.14606	1	10223	10223		0	0	1	127930			29344	7953	14546	14605	33686	33686					0.23023915769954328
RRARTKRGKP	10	Unmodified	_RRARTKRGKP_					0	0	0			REV__ENSG00000239697|ENST00000293825|TNFSF12	REV__ENSG00000239697|ENST00000293825|TNFSF12	MSMS	GG20161007_CRH_Patient100_A02_01	1	613.3891479372978	2	613.389254	1224.76395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.445	1	85.445	84.945	85.945	0								0	0	0	0.66166	1	35600	35600		1.6526	0.32309	1		+		29345	11914	14547	14606	33687	33687					0.1605632524513112
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8825866580009	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2571	1	4.2571	3.7571	4.7571	0								0	0	0	0.66264	1	1750	1750		0	0	1				29346	1537	14548	14607	33688	33688					-0.012014110126074229
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8831664919853	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.27989	1	0.94727	0.44727	1.4473	0.66738								0	0	0	0.66264	1	114	114		0	0	1				29347	1537	14548	14607	33689	33689					-0.012014110126074229
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8829223513603	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.52892	1	1.1963	0.6963	1.6963	0.66738								0	0	0	0.66264	1	216	216		0	0	1				29348	1537	14548	14607	33690	33690					-0.012014110126074229
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8828918337822	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.63604	1	1.3034	0.80342	1.8034	0.66738								0	0	0	0.66264	1	260	260		0	0	1				29349	1537	14548	14607	33691	33691					-0.012014110126074229
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8829833865166	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.73322	1	1.3865	0.88654	1.8865	0.65331								0	0	0	0.66264	1	300	300		0	0	1				29350	1537	14548	14607	33692	33692					-0.012014110126074229
RRCHMVERLC	10	Unmodified	_RRCHMVERLC_					0	0	0		ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	ENSG00000105708|ENST00000344099|ZNF14	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8830139040947	3	434.882855	1301.62673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0616	1	1.7149	1.2149	2.2149	0.65331								0	0	0	0.66264	1	434	434		0	0	1				29351	1537	14548	14607	33693	33693					-0.012014110126074229
RRCLAPPLLAR	11	Unmodified	_RRCLAPPLLAR_					0	0	0			REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	REV__ENST00000442007.1_1_6:73972946-73980200:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5937682986259	3	422.592286	1264.75503	0.38648	0.00016332	1.1838	0.00050028	1.5703	0.0006636	422.5928765355281	34.084	0.26704	35.359	35.211	35.478	1.2746					38	27	2	0	0	0	1.0224	1	14269	14269		2.4348	0.8425	1	11289000	+		29352	13090	14549	14608	33694	33694					0.13324215564421138
RRCLKHGL	8	Unmodified	_RRCLKHGL_					0	0	0			REV__ENST00000441006.5_1_22:17538070-17538178:+|nuORF	REV__ENST00000441006.5_1_22:17538070-17538178:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1958190798759	3	328.195756	981.565438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.778	1	28.525	28.025	29.025	1.747								0	0	0	1.0178	1	11206	11206		0.40072	0	1		+		29353	13082	14550	14609	33695	33695					0.07391768341926763
RRCPPLLRGLV	11	Unmodified	_RRCPPLLRGLV_					0	0	0		ZDHHC16|p.V102Sfs*25|1|0.07|ENSG00000171307|chr10:97452150-97452150|G/-|frameshift_variant;ENST00000462924.5_1_10:99206088-99212597:+|nuORF;nc|ENSG00000171307|Q969W1-4|ZDHHC16;nc|ENSG00000171307|Q969W1-3|ZDHHC16;nc|ENSG00000171307|Q969W1-2|ZDHHC16;ENSG00000171307|ENST00000393760|ZDHHC16	ZDHHC16|p.V102Sfs*25|1|0.07|ENSG00000171307|chr10:97452150-97452150|G/-|frameshift_variant	ZDHHC16|p.V102Sfs*25|1|0.07|ENSG00000171307|chr10:97452150-97452150|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2648803591728	3	427.26417	1278.77068	1.7969	0.00076775	0.50159	0.00021431	2.2985	0.00098206	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	1.0191	1	16714	16714		2.6312	0	1	44576000			29354	4183	14551	14610	33696	33696					0.14244502081487553
RRCSCARRAAV	11	Unmodified	_RRCSCARRAAV_					0	0	0			REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	416.2682678103447	3	416.888997	1247.64516	1.589	0.00066245	2.5509	0.0010634	4.1399	0.0017259	416.88882190361994	69.558	0.28098	69.88	69.721	70.002	0.32224					13	8	2	0	0	0	0.14606	1	29163	29163		1.2148	1.1504	1	1348300	+		29355	14144	14552	14611	33697	33697					0.031244669535908542
RRCSCARRAAV	11	Unmodified	_RRCSCARRAAV_					0	0	0			REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	416.888997	1247.64516	0.5106	0.00021286	1.1393	0.00047497	1.6499	0.00068784	416.8890986694727	69.978	0.3147	69.978	69.834	70.149	0	0.071758	0.0013661	NaN	1.2148	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1505000	+		29356	14144	14552	14611							0.031244669535908542
RRCSCARRAAV	11	Unmodified	_RRCSCARRAAV_					0	0	0			REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	REV__ENST00000607772.5_2_6:154831373-154831601:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	416.888997	1247.64516	2.0693	0.00086266	0.011245	4.688E-06	2.0805	0.00086735	416.88856541250203	68.519	0.39733	69.885	69.662	70.06	1.3657	-0.021059	-4.4756E-05	NaN	1.2148	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2920400	+		29357	14144	14552	14611							0.031244669535908542
RRCSTCSGR	9	Unmodified	_RRCSTCSGR_					0	0	0		nc|ENSG00000125046|Q9Y2M2-3|SSUH2;ENST00000413305.5_1_3:8661556-8676112:-|nuORF;nc|ENSG00000125046|Q9Y2M2-1|SSUH2;ENSG00000125046|ENST00000544814|SSUH2;ENST00000420394.5_1_3:8661556-8693727:-|nuORF	nc|ENSG00000125046|Q9Y2M2-3|SSUH2	nc|ENSG00000125046|Q9Y2M2-3|SSUH2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2405883669853	2	513.240009	1024.46547	2.2174	0.0011381	-1.0662	-0.00054721	1.1512	0.00059085	513.2395605709538	92.787	0.69932	92.787	92.502	93.202	0					113	22	7	0	0	0	0.53525	2	38783	38783;38876		13.906	0.39817	1	30501000			29358	2248	14553	14612	33698;33699	33698					-0.04578837054214091
RRCSTCSGR	9	Unmodified	_RRCSTCSGR_					0	0	0		nc|ENSG00000125046|Q9Y2M2-3|SSUH2;ENST00000413305.5_1_3:8661556-8676112:-|nuORF;nc|ENSG00000125046|Q9Y2M2-1|SSUH2;ENSG00000125046|ENST00000544814|SSUH2;ENST00000420394.5_1_3:8661556-8693727:-|nuORF	nc|ENSG00000125046|Q9Y2M2-3|SSUH2	nc|ENSG00000125046|Q9Y2M2-3|SSUH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2413818240166	2	513.240009	1024.46547	3.7094	0.0019038	-1.6075	-0.00082504	2.1019	0.0010788	513.2392351935993	91.314	0.71953	92.68	92.374	93.093	1.366					112	22	7	0	0	0	0.53525	1	38376	38376		13.906	0.39817	1	26010000			29359	2248	14553	14612	33700	33700					-0.04578837054214091
RRDRRPRR	8	Unmodified	_RRDRRPRR_					0	0	0			REV__CDK13|p.T444Yfs*5|1|0.19|ENSG00000065883|chr7:39987716-39987717|-/T|frameshift_variant	REV__CDK13|p.T444Yfs*5|1|0.19|ENSG00000065883|chr7:39987716-39987717|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3577758669853	2	584.355745	1166.69694	2.4547	0.0014344	1.0644	0.00062197	3.5191	0.0020564	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89051	1	31087	31087		2.3027	0	1	7390500	+		29360	8198	14554	14613	33701	33701					0.12025714754008732
RREAQLLL	8	Unmodified	_RREAQLLL_					0	0	0			REV__ENSG00000243449|ENST00000409248|C4orf48	REV__ENSG00000243449|ENST00000409248|C4orf48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.8066589236259	2	499.808908	997.603263	1.2558	0.00062767	-2.0158	-0.0010075	-0.76001	-0.00037986	499.80601323609994	67.319	1.5766	69.189	68.967	70.544	1.87					62	50	2	0	0	0	0.60362	1	28252	28252		39.957	0	1	2803400	+		29361	11895	14555	14614	33702	33702					0.10436557808372982
RREARLRRLTR	11	Unmodified	_RREARLRRLTR_					0	0	0			REV__ENST00000590836.1_1_17:41132593-41133163:+|nuORF	REV__ENST00000590836.1_1_17:41132593-41133163:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1014282107353	4	371.485463	1481.91274	1.7735	0.00065882	0.33034	0.00012272	2.1038	0.00078153	371.7363055148884	46.785	0.9291	48.761	48.352	49.282	1.976					72	29	3	0	0	0	0.14606	1	19613	19613		0.094841	0	1	3482200	+		29362	11747	14556	14615	33703	33703					0.1910643114802042
RRFLIMSEL	9	Unmodified	_RRFLIMSEL_					0	0	0		ENST00000477891.1_1_10:15883425-15902451:-|nuORF	ENST00000477891.1_1_10:15883425-15902451:-|nuORF	ENST00000477891.1_1_10:15883425-15902451:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1856262087822	3	388.890109	1163.6485	1.6757	0.00065165	0.54458	0.00021178	2.2203	0.00086344	389.2243449951978	39.293	0.25746	40.589	40.443	40.701	1.2961					10	7	2	0	0	0	0.11809	1	16472	16472		3.5871	1.0886	1	494260			29363	6794	14557	14616	33704	33704					0.07322040279268549
RRFLLRRA	8	Unmodified	_RRFLLRRA_					0	0	0		ENSG00000139915|ENST00000399232|MDGA2	ENSG00000139915|ENST00000399232|MDGA2	ENSG00000139915|ENST00000399232|MDGA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3533813357353	2	544.351609	1086.68866	3.2477	0.0017679	0.18105	9.8556E-05	3.4288	0.0018665	544.3516665471458	107.51	0.23145	107.67	107.52	107.75	0.15795					50	11	6	0	0	0	0.89198	1	46225	46225		0	0	1	1583199999.9999998			29364	2898	14558	14617	33705	33705					0.1487876778471673
RRFMRRRKRRL	11	Unmodified	_RRFMRRRKRRL_					0	0	0		ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	ENST00000391975.5_1_2:242194961-242195633:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	327.2107116580009	5	327.00853	1630.00627	-0.33194	-0.00010855	1.0172	0.00033263	0.68525	0.00022408	327.2099176290179	51.798	0.74693	53.194	52.776	53.523	1.3966					52	25	3	0	0	0	1.0405	1	21729	21729		0	0	1	3650500			29365	6252	14559	14618	33706	33706					0.21646452049435538
RRFNSLTKK	9	Unmodified	_RRFNSLTKK_					0	0	0			REV__nc|ENSG00000068878|Q14997-4|PSME4	REV__nc|ENSG00000068878|Q14997-4|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.3468505740166	2	575.346189	1148.67783	2.1732	0.0012503	-2.2245	-0.0012799	-0.051295	-2.9512E-05	575.3449557963314	82.936	0.58424	83.206	83.001	83.585	0.27029					37	18	3	0	0	0	0.85068	1	34665	34665		0.45834	0.057624	1	1159400	+		29366	8706	14560	14619	33707	33707					0.10943320619730912
RRFVEACR	8	Unmodified	_RRFVEACR_					0	0	0		nc|ENSG00000176396|Q8N6I1-2|EID2;ENSG00000176396|ENST00000390658|EID2	nc|ENSG00000176396|Q8N6I1-2|EID2	nc|ENSG00000176396|Q8N6I1-2|EID2	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1864807009697	3	346.187149	1035.53962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.84	110.34	111.34	0.047043								0	0	0	1.0178	1	47787	47787		0.40072	0	1				29367	4407	14561	14620	33708	33708					0.02326874099617271
RRFVKKTLSLK	11	Unmodified	_RRFVKKTLSLK_					0	0	0		ENST00000518780.1_1_8:1704216-1707628:+|nuORF	ENST00000518780.1_1_8:1704216-1707628:+|nuORF	ENST00000518780.1_1_8:1704216-1707628:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.0561096072197	4	344.727861	1374.88234	-1.3583	-0.00046823	1.6472	0.00056783	0.28894	9.9604E-05	344.7274140994275	41.884	0.19125	41.884	41.789	41.98	0					6	5	2	0	0	0	0.14606	1	17541	17541		0.094841	0	1	194340			29368	7062	14562	14621	33709	33709					0.20989259710268016
RRFVVVAVLH	10	Unmodified	_RRFVVVAVLH_					0	0	0		ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	598.3770629763603	2	598.374749	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.34	1	100.41	99.912	100.91	0.072716								0	0	0	0.66218	1	42009	42009		0	0	1				29369	6979	14563	14622	33710	33710					0.14536787896122405
RRFYRQFKFWL	11	Unmodified	_RRFYRQFKFWL_					0	0	0			REV__ENSG00000075035|ENST00000547525|WSCD2	REV__ENSG00000075035|ENST00000547525|WSCD2	MSMS	GG20161007_CRH_Patient100_W632_02	4	824.1212036013603	2	823.956969	1645.89939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.34	1	101.53	101.03	102.03	0.19076								0	0	0	0.63775	1	42611	42611		0	0	1		+		29370	8757	14564	14623	33711	33711					0.10227180316041995
RRGAGSRS	8	Unmodified	_RRGAGSRS_					0	0	0			REV__ENST00000298532.2_1_9:139282988-139286542:-|nuORF	REV__ENST00000298532.2_1_9:139282988-139286542:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.7373229861259	2	423.736274	845.457996	2.2323	0.00094592	0.78104	0.00033096	3.0134	0.0012769	423.73659391303806	65.679	0.37793	66.006	65.833	66.211	0.32689					16	11	2	0	0	0	0.89051	1	27500	27500		2.3027	0	1	1365900	+		29371	12305	14565	14624	33712	33712					0.02908514732052936
RRGCPLLW	8	Unmodified	_RRGCPLLW_					0	0	0			REV__ENST00000302516.9_1_16:70605737-70605818:+|nuORF	REV__ENST00000302516.9_1_16:70605737-70605818:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.1864196658134	3	334.18849	999.54364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.038	1	78.038	77.538	78.538	0								0	0	0	1.0178	1	32487	32487		0.45834	0	1		+		29372	12320	14566	14625	33713	33713					0.04384963593338398
RRGCVAGGGH	10	Unmodified	_RRGCVAGGGH_					0	0	0			REV__ENST00000529503.5_1_8:145137494-145138312:+|nuORF	REV__ENST00000529503.5_1_8:145137494-145138312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2440978884697	2	485.243409	968.472266	1.8779	0.00091125	-2.6244	-0.0012735	-0.74646	-0.00036222	485.24213929971506	76.305	0.36131	76.305	76.105	76.466	0					22	11	3	0	0	0	0.89646	1	31733	31733		1.8442	1.0506	1	2846500	+		29373	13691	14567	14626	33714	33714					-0.013231561113229873
RRGCYVCL	8	Unmodified	_RRGCYVCL_					0	0	0			REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2431823611259	2	485.241489	968.468426	3.0503	0.0014801	0.44734	0.00021707	3.4976	0.0016972	485.2415677038863	76.116	0.35909	76.438	76.272	76.631	0.32163					19	11	2	0	0	0	0.89176	2	31802	31802;31855		0.79363	0	1	2810300	+		29374	13507	14568	14627	33715;33716	33715					-0.01706961929392037
RRGCYVCL	8	Unmodified	_RRGCYVCL_					0	0	0			REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	485.241489	968.468426	1.8779	0.00091125	1.3322	0.00064644	3.2101	0.0015577	485.24213929971506	76.305	0.36131	76.305	76.105	76.466	0	-0.12281	0.00027128	NaN	0.79363	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2846500	+		29375	13507	14568	14627							-0.01706961929392037
RRGCYVCL	8	Unmodified	_RRGCYVCL_					0	0	0			REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	485.241489	968.468426	3.0503	0.0014801	0.44734	0.00021707	3.4976	0.0016972	485.2415677038863	76.116	0.35909	76.438	76.272	76.631	0.32163	0.010236	-0.00058748	NaN	0.79363	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2810300	+		29376	13507	14568	14627							-0.01706961929392037
RRGCYVCL	8	Unmodified	_RRGCYVCL_					0	0	0			REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	REV__ENST00000502583.5_2_6:7389738-7389888:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	485.241489	968.468426	2.8508	0.0013833	1.4512	0.00070417	4.302	0.0020875	485.2424761512964	75.234	0.33337	76.54	76.343	76.677	1.3063	0.11257	0.00038673	NaN	0.79363	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	462240	+		29377	13507	14568	14627							-0.01706961929392037
RRGIYGKG	8	Unmodified	_RRGIYGKG_					0	0	0		tr|A0A553SQ56|A0A553SQ56_NIACIUPF0178proteinCEQ21_19080OS=NialliacirculansOX=1397GN=CEQ21_19080PE=3SV=1	tr|A0A553SQ56|A0A553SQ56_NIACIUPF0178proteinCEQ21_19080OS=NialliacirculansOX=1397GN=CEQ21_19080PE=3SV=1	tr|A0A553SQ56|A0A553SQ56_NIACIUPF0178proteinCEQ21_19080OS=NialliacirculansOX=1397GN=CEQ21_19080PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	906.5314208865166	1	906.52681	905.519533	3.056	0.0027704	3.2278	0.0029261	6.2838	0.0056964	906.5279549015781	106.93	0.11021	107.09	107.02	107.13	0.16174					10	4	3	0	0	0	0.89051	1	45842	45842		2.3027	0	1	16973000			29378	16501	14569	14628	33717	33717					0.0629944643133058
RRGKPRNRR	9	Unmodified	_RRGKPRNRR_					0	0	0		ENST00000604760.1_1_15:67834762-67834924:-|nuORF	ENST00000604760.1_1_15:67834762-67834924:-|nuORF	ENST00000604760.1_1_15:67834762-67834924:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2500182986259	3	399.250022	1194.72824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.19	1	110.19	109.69	110.69	0								0	0	0	0.42693	1	47711	47711		0	0	1				29379	7554	14570	14629	33718	33718					0.13866287788096088
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2026855349541	4	328.203547	1308.78508	-2.1213	-0.00069621	-0.83313	-0.00027343	-2.9544	-0.00096965	328.2030365179827	37.778	0.70225	37.778	37.47	38.172	0					70	24	4	0	0	0	1.0191	1	15861	15861		2.6312	0.19645	1	9907200	+		29380	13774	14571	14630	33719	33719					0.14304290553968713
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2682983279228	3	437.268971	1308.78508	1.2901	0.00056411	-2.0225	-0.00088437	-0.73242	-0.00032026	437.2675329460279	42.015	0.85207	42.015	41.627	42.479	0					60	26	3	0	0	0	1.0191	1	17571	17571		2.6312	1.9336	1	1120900	+		29381	13774	14571	14630	33720	33720					0.14304290553968713
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2017089724541	4	328.203547	1308.78508	-0.9198	-0.00030188	-3.0505	-0.0010012	-3.9703	-0.0013031	328.2024015032017	35.144	0.44951	36.418	36.233	36.682	1.2746					95	41	3	0	0	0	0.98455	2	14706	14706;14825		4.7159	1.6437	1	13513000	+		29382	13774	14571	14630	33721;33722	33721					0.14304290553968713
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.4537231326103	4	328.203547	1308.78508	-0.95799	-0.00031442	-3.2002	-0.0010503	-4.1582	-0.0013647	328.20226472412736	35.606	0.401	36.881	36.661	37.062	1.2746					91	32	3	0	0	0	1.0191	1	14916	14916		2.6312	0	1	12916000	+		29383	13774	14571	14630	33723	33723					0.14304290553968713
RRGLNKGQRPK	11	Unmodified	_RRGLNKGQRPK_					0	0	0			REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	REV__ENST00000539643.1_1_17:79219996-79220904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2682372927666	3	437.268971	1308.78508	1.6833	0.00073606	-3.0898	-0.0013511	-1.4065	-0.000615	437.26698485462055	39.383	0.33899	41.219	41.037	41.376	1.8366					14	10	2	0	0	0	1.0191	1	16515	16515		2.6312	1.3016	1	905750	+		29384	13774	14571	14630	33724	33724					0.14304290553968713
RRGQLKERRTA	11	Unmodified	_RRGQLKERRTA_					0	0	0			REV__ENSG00000188827|ENST00000294008|SLX4	REV__ENSG00000188827|ENST00000294008|SLX4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9101440310478	2	685.908008	1369.80146	2.4567	0.0016851	0.87121	0.00059757	3.3279	0.0022827	685.9081370459064	83.221	1.4749	83.221	82.277	83.752	0					104	47	3	0	0	0	1.0366	1	34799	34799		1.1933	0	1	2273600	+		29385	11589	14572	14631	33725	33725					0.1313537172004544
RRGRDCADRSV	11	Unmodified	_RRGRDCADRSV_					0	0	0		ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8878051638603	3	430.88631	1289.6371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.27	1	110.42	109.92	110.92	0.15228								0	0	0	0.63775	1	47823	47823		0	0	1				29386	5808	14573	14632	33726	33726					0.0038661123778638284
RRGRDCADRSV	11	Unmodified	_RRGRDCADRSV_					0	0	0		ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8876525759697	3	430.88631	1289.6371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.9	1	111.05	110.55	111.55	0.15038								0	0	0	0.63775	1	48076	48076		0	0	1				29387	5808	14573	14632	33727	33727					0.0038661123778638284
RRGRDCADRSV	11	Unmodified	_RRGRDCADRSV_					0	0	0		ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	ENST00000311956.8_1_11:46699549-46699660:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8874694705009	3	430.88631	1289.6371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.33	1	111.48	110.98	111.98	0.15038								0	0	0	0.63775	1	48251	48251		0	0	1				29388	5808	14573	14632	33728	33728					0.0038661123778638284
RRGRGLGRRP	10	Unmodified	_RRGRGLGRRP_					0	0	0			REV__ENST00000431392.1_1_2:20101258-20101393:-|nuORF	REV__ENST00000431392.1_1_2:20101258-20101393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2467834353447	3	394.246389	1179.71734	0.55191	0.00021759	2.0327	0.00080137	2.5846	0.001019	394.2470764659531	90.454	1.5663	90.454	90.095	91.662	0					97	49	5	0	0	0	0.89803	1	37744	37744		1.5923	0.63001	1	33909000	+		29389	13024	14574	14633	33729	33729					0.13466885413822638
RRGRGLGRRP	10	Unmodified	_RRGRGLGRRP_					0	0	0			REV__ENST00000431392.1_1_2:20101258-20101393:-|nuORF	REV__ENST00000431392.1_1_2:20101258-20101393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2476074099541	3	394.246389	1179.71734	2.6741	0.0010543	-0.15896	-6.2671E-05	2.5152	0.0009916	394.2462107237669	90.331	1.7877	90.541	90.017	91.805	0.20904					105	55	5	0	0	0	0.89803	1	37904	37904		0.62683	0	1	33446000	+		29390	13024	14574	14633	33730	33730					0.13466885413822638
RRGRRKKVIPQ	11	Unmodified	_RRGRRKKVIPQ_					0	0	0			REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	REV__nc|ENSG00000177200|Q3L8U1-2|CHD9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	348.4753906130791	4	349.229831	1392.89022	-1.6231	-0.00056683	0.26881	9.3875E-05	-1.3543	-0.00047296	349.2301258737117	31.871	0.15991	31.871	31.756	31.916	0					6	4	2	0	0	0	0.14606	1	13324	13324		1.4551	0.75745	1	1105900	+		29391	11210	14575	14634	33731	33731					0.20948831750411046
RRGRRQRRQRR	11	Unmodified	_RRGRRQRRQRR_					0	0	0		ENST00000255977.6_2_7:140178977-140179166:-|nuORF	ENST00000255977.6_2_7:140178977-140179166:-|nuORF	ENST00000255977.6_2_7:140178977-140179166:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.6631957888603	3	527.659967	1579.95807	2.8136	0.0014846	1.2814	0.00067612	4.0949	0.0021607	527.6606344943333	92.317	0.97449	92.485	91.862	92.837	0.16835					57	30	3	0	0	0	1.0402	1	38643	38643		0.08335	0	1	705320			29392	5597	14576	14635	33732	33732					0.1912909445375135
RRGRTVAW	8	Unmodified	_RRGRTVAW_					0	0	0			REV__nc|ENSG00000110811|Q8IVL6-2|P3H3	REV__nc|ENSG00000110811|Q8IVL6-2|P3H3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2925598025322	2	501.291217	1000.56788	2.3769	0.0011915	-1.4706	-0.00073718	0.90633	0.00045433	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.89176	2	27898	27898;27948		0.79363	0	1	2426300	+		29393	9307	14577	14636	33733;33734	33733					0.06761940071214667
RRGRWRTNIAR	11	Unmodified	_RRGRWRTNIAR_					0	0	0			REV__ENST00000238714.7_1_2:60983533-60983617:+|nuORF	REV__ENST00000238714.7_1_2:60983533-60983617:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2846557497978	3	481.283503	1440.82868	2.5358	0.0012204	0.039069	1.8803E-05	2.5748	0.0012392	481.2834259724061	89.603	0.82357	89.603	89.464	90.288	0					44	25	2	0	0	0	1.039	2	37643	37515;37643		0.45452	0.29519	1	1334500	+		29394	12118	14578	14637	33735;33736	33736					0.1258990005112537
RRGSLRNPLA	10	Unmodified	_RRGSLRNPLA_					0	0	0		sp|P09728|US10_HCMVAUniqueshortUS10glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US10PE=3SV=1;sp|F5HFJ7|US10_HCMVMMembraneglycoproteinUS10OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US10PE=3SV=1	sp|P09728|US10_HCMVAUniqueshortUS10glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US10PE=3SV=1	sp|P09728|US10_HCMVAUniqueshortUS10glycoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=US10PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3401977419853	2	570.341438	1138.66832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.954	1	70.954	70.454	71.454	0								0	0	0	0.66193	1	29552	29552		1.1933	0.23107	1				29395	15983	14579	14638	33737	33737					0.10453552334229244
RRGTNLQNI	9	Unmodified	_RRGTNLQNI_					0	0	0			REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3032104372978	2	536.304521	1070.59449	3.1106	0.0016682	-2.0823	-0.0011168	1.0283	0.00055146	536.3023994275891	63.852	0.65023	65.78	65.52	66.17	1.928					25	20	2	0	0	0	0.27148	1	26795	26795		26.884	0	1	6991600	+		29396	15404	14580	14639	33738	33738					0.062015841718903175
RRGTNLQNI	9	Unmodified	_RRGTNLQNI_					0	0	0			REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	536.304521	1070.59449	1.6815	0.00090181	0.60402	0.00032394	2.2855	0.0012257	536.3041512861802	65.853	0.28458	65.853	65.741	66.025	0	0.056235	-0.00051886	NaN	26.884	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	991680	+		29397	15404	14580	14639							0.062015841718903175
RRGTNLQNI	9	Unmodified	_RRGTNLQNI_					0	0	0			REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	536.304521	1070.59449	1.9907	0.0010676	1.4232	0.00076326	3.4139	0.0018309	536.3051578042571	65.428	0.22197	65.755	65.643	65.865	0.32689	-0.041834	0.00035978	NaN	26.884	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	901020	+		29398	15404	14580	14639							0.062015841718903175
RRGTNLQNI	9	Unmodified	_RRGTNLQNI_					0	0	0			REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	536.304521	1070.59449	3.1633	0.0016965	2.0012	0.0010733	5.1645	0.0027698	536.3052478962778	64.393	0.30459	65.8	65.528	65.833	1.4071	0.0028007	0.00097978	NaN	26.884	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4909600	+		29399	15404	14580	14639							0.062015841718903175
RRGTNLQNI	9	Unmodified	_RRGTNLQNI_					0	0	0			REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	REV__tr|A0A7D6VR64|A0A7D6VR64_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23630PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	536.304521	1070.59449	3.1106	0.0016682	-2.0823	-0.0011168	1.0283	0.00055146	536.3023994275891	63.852	0.65023	65.78	65.52	66.17	1.928	-0.017202	-0.0034003	NaN	26.884	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6991600	+		29400	15404	14580	14639							0.062015841718903175
RRHHLRLQRVP	11	Unmodified	_RRHHLRLQRVP_					0	0	0			REV__ENST00000307161.5_1_4:187455227-187455620:-|nuORF	REV__ENST00000307161.5_1_4:187455227-187455620:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	734.4492675662041	2	734.447634	1466.88072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.16	1	105.32	104.82	105.82	0.15859								0	0	0	0.63775	1	44728	44728		0.30703	0	1		+		29401	12344	14581	14640	33739	33739					0.16595063464842497
RRHRRLGST	9	Unmodified	_RRHRRLGST_					0	0	0			REV__ENST00000382108.7_1_13:24734916-24735012:+|nuORF	REV__ENST00000382108.7_1_13:24734916-24735012:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2290832400322	3	380.226995	1137.65916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.158	1	94.029	93.529	94.529	0.87176								0	0	0	0.42693	1	39211	39211		1.0715	0	1		+		29402	12781	14582	14641	33740	33740					0.09583203768534077
RRHTLRAAER	10	Unmodified	_RRHTLRAAER_					0	0	0		ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	ENSG00000159433|ENST00000290607|STARD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3706542849541	2	633.368518	1264.72248	2.3357	0.0014794	0.21372	0.00013536	2.5494	0.0016147	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	0.89803	1	34458	34458		1.4819	0.28856	1	11549000			29403	3528	14583	14642	33741	33741					0.1007114448577795
RRIFIIIKF	9	Unmodified	_RRIFIIIKF_					0	0	0			REV__ENST00000358951.6_1_1:220323978-220324029:-|nuORF	REV__ENST00000358951.6_1_1:220323978-220324029:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1804992556572	3	402.600888	1204.78083	1.3086	0.00052683	-2.3361	-0.00094053	-1.0276	-0.0004137	402.60044363379865	45.635	0.1274	47.606	47.536	47.663	1.9703					5	3	2	0	0	0	0.11955	1	19124	19124		0.23584	0	1	357220	+		29404	12584	14584	14643	33742	33742					0.1866343307833631
RRIKRFKFTA	10	Unmodified	_RRIKRFKFTA_					0	0	0			REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|58|2|sense	REV__L1PA7_dup9238|chr10:48372221-48377370:+|1.4943041569802586|0.2795461482764699|2.42|429.0|58|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	332.1704894900322	4	331.459653	1321.80951	1.1618	0.00038509	3.5622	0.0011807	4.724	0.0015658	331.71206414601903	47.564	0.32014	47.895	47.726	48.046	0.33034					20	10	2	0	0	0	0.12561	1	19969	19969		0	0	1	778060	+		29405	14335	14585	14644	33743	33743					0.16147550707501068
RRILQPRPRWK	11	Unmodified	_RRILQPRPRWK_					0	0	0			REV__nc|ENSG00000180353|P14317-2|HCLS1	REV__nc|ENSG00000180353|P14317-2|HCLS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.6502258181572	3	502.647782	1504.92152	3.7736	0.0018968	0.98733	0.00049628	4.761	0.0023931	502.6483332962225	97.834	0.12311	98.062	98.011	98.134	0.22776					7	3	3	0	0	0	1.0402	1	41177	41177		0.094841	0.094841	1	12793000	+		29406	14498	14586	14645	33744	33744					0.18925404784454258
RRIPIRIT	8	Unmodified	_RRIPIRIT_					0	0	0			REV__nc|ENSG00000131263|Q9NVW2-2|RLIM	REV__nc|ENSG00000131263|Q9NVW2-2|RLIM	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2284423708916	3	342.229454	1023.66653	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.45	1	106.45	105.95	106.95	0								0	0	0	1.0178	1	45422	45422		0.40072	0	1		+		29407	9816	14587	14646	33745	33745					0.15564543316259005
RRKARGGRR	9	Unmodified	_RRKARGGRR_					0	0	0			REV__tr|A0A553SHP2|A0A553SHP2_NIACISmallribosomalsubunitproteinbS18OS=NialliacirculansOX=1397GN=rpsRPE=3SV=1	REV__tr|A0A553SHP2|A0A553SHP2_NIACISmallribosomalsubunitproteinbS18OS=NialliacirculansOX=1397GN=rpsRPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1008483767509	3	371.570984	1111.69112	-0.58938	-0.000219	-2.3076	-0.00085744	-2.897	-0.0010764	371.5700964883476	78.937	0.79391	78.937	78.597	79.391	0					47	25	3	0	0	0	0.11944	1	32870	32870		0.96228	0.56156	1	1696500	+		29408	14805	14588	14647	33746	33746					0.13974616242376214
RRKARGGRR	9	Unmodified	_RRKARGGRR_					0	0	0			REV__tr|A0A553SHP2|A0A553SHP2_NIACISmallribosomalsubunitproteinbS18OS=NialliacirculansOX=1397GN=rpsRPE=3SV=1	REV__tr|A0A553SHP2|A0A553SHP2_NIACISmallribosomalsubunitproteinbS18OS=NialliacirculansOX=1397GN=rpsRPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1015807986259	3	371.570984	1111.69112	-0.57132	-0.00021229	-0.73079	-0.00027154	-1.3021	-0.00048383	371.570540191306	78.299	0.56508	78.299	78.032	78.597	0					35	17	3	0	0	0	0.11944	1	32583	32583		0.96228	0	1	1498200	+		29409	14805	14588	14647	33747	33747					0.13974616242376214
RRKHKCLILKR	11	Unmodified	_RRKHKCLILKR_					0	0	0		ENST00000481894.1_1_1:115138166-115167938:-|nuORF	ENST00000481894.1_1_1:115138166-115167938:-|nuORF	ENST00000481894.1_1_1:115138166-115167938:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537719607353	4	363.487045	1449.91908	1.2762	0.00046389	0.98443	0.00035783	2.2606	0.00082171	363.48744964954386	65.711	0.11818	67.11	67.034	67.152	1.3989					5	3	2	0	0	0	0.14606	1	27568	27568		0	0	1	328270			29410	6829	14589	14648	33748	33748					0.21211233055169032
RRKKKAAA	8	Unmodified	_RRKKKAAA_					0	0	0		ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8135558962822	2	464.811785	927.609017	3.3611	0.0015623	-0.79513	-0.00036958	2.566	0.0011927	464.81227107857393	107.71	0.25436	107.87	107.72	107.97	0.15781					50	13	5	0	0	0	0.89198	1	46421	46421		0	0	1	7110199999.999999			29411	3135	14590	14649	33749	33749					0.1423170111069112
RRKKKAAA	8	Unmodified	_RRKKKAAA_					0	0	0		ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	ENSG00000146109|ENST00000274849|ABT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.8133117556572	2	464.811785	927.609017	3.5434	0.001647	-1.4857	-0.00069057	2.0577	0.00095644	464.81188576962654	107.68	0.23774	107.84	107.72	107.96	0.15795					48	12	5	0	0	0	0.89198	1	46355	46355		0	0	1	6081999999.999999			29412	3135	14590	14649	33750	33750					0.1423170111069112
RRKKKKKKL	9	Unmodified	_RRKKKKKKL_					0	0	0		nc|ENSG00000114923|P48751-2|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-2|SLC4A3	nc|ENSG00000114923|P48751-2|SLC4A3	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9394409060478	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.39	1	102.39	101.89	102.89	0								0	0	0	0.42693	1	42904	42904		0	0	1				29413	1888	14591	14650	33751	33751					0.2691701798387385
RRKKKKKKL	9	Unmodified	_RRKKKKKKL_					0	0	0		nc|ENSG00000114923|P48751-2|SLC4A3;ENSG00000114923|ENST00000358055|SLC4A3;nc|ENSG00000114923|P48751-3|SLC4A3	nc|ENSG00000114923|P48751-2|SLC4A3	nc|ENSG00000114923|P48751-2|SLC4A3	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.9380981326103	2	606.940591	1211.86663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.5	1	102.5	102	103	0								0	0	0	0.42693	1	42955	42955		0	0	1				29414	1888	14591	14650	33752	33752					0.2691701798387385
RRKKKKKKPP	10	Unmodified	_RRKKKKKKPP_					0	0	0			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1293.689501941204	1	1293.89537	1292.88809	0.73745	0.00095419	-3.8052	-0.0049235	-3.0677	-0.0039693	1293.895408301184	37.98	0.1922	39.264	39.113	39.305	1.284					10	7	2	0	0	0	0.89646	2	15915	15915;15922		1.8442	1.8442	1	888140	+		29415	10615	14592	14651	33753;33754	33753					0.25336403012579467
RRKKKKKKPP	10	Unmodified	_RRKKKKKKPP_					0	0	0			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1293.89537	1292.88809	0.73745	0.00095419	-3.8052	-0.0049235	-3.0677	-0.0039693	1293.895408301184	37.98	0.1922	39.264	39.113	39.305	1.284	0.023204	0.001709	NaN	1.8442	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	888140	+		29416	10615	14592	14651							0.25336403012579467
RRKKKKKKPP	10	Unmodified	_RRKKKKKKPP_					0	0	0			REV__ENSG00000160818|ENST00000368232|GPATCH4	REV__ENSG00000160818|ENST00000368232|GPATCH4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1293.89537	1292.88809	-0.38871	-0.00050295	-6.0802	-0.0078671	-6.4689	-0.0083701	1293.8902703828057	37.398	0.26144	39.218	39.078	39.34	1.8202	-0.023204	-0.0012346	NaN	1.8442	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1024400	+		29417	10615	14592	14651							0.25336403012579467
RRKKKKKYRKK	11	Unmodified	_RRKKKKKYRKK_					0	0	0			REV__ENSG00000166012|ENST00000448108|TAF1D	REV__ENSG00000166012|ENST00000448108|TAF1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3586303591728	3	516.354599	1546.04197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.18	1	100.39	99.886	100.89	0.20527								0	0	0	0.63775	1	42131	42131		0	0	1		+		29418	10807	14593	14652	33755	33755					0.29078812778084284
RRKKKRRR	8	Unmodified	_RRKKKRRR_					0	0	0			REV__ENST00000484301.5_2_1:47048551-47051597:-|nuORF	REV__ENST00000484301.5_2_1:47048551-47051597:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	592.4078857302666	2	592.407781	1182.80101	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.35	1	106.51	106.01	107.01	0.15781								0	0	0	1.0178	1	45528	45528		0.69038	0	1		+		29419	8796	14594	14653	33756	33756					0.21692041581536614
RRKKPPAV	8	Unmodified	_RRKKPPAV_					0	0	0			REV__nc|ENSG00000136960|Q13822-2|ENPP2	REV__nc|ENSG00000136960|Q13822-2|ENPP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.0390807986259	3	317.878533	950.613768	-0.12665	-4.026E-05	1.9286	0.00061307	1.802	0.00057281	317.87907684753753	19.424	0.63626	19.618	19.356	19.992	0.19342					27	20	2	0	0	0	2.3239	1	8023	8023		0.45834	0	1	568730	+		29420	14443	14595	14654	33757	33757					0.13648585253463352
RRKKRRQR	8	Unmodified	_RRKKRRQR_					0	0	0		SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant;SCN3A|p.Y1443Tfs*18|1|0.09|ENSG00000153253|chr2:165095615-165095615|A/-|frameshift_variant;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3926879763603	2	592.389588	1182.76462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.376	1	64.376	63.876	64.876	0								0	0	0	1.0178	1	26837	26837		0.69038	0	1				29421	3353	14596	14655	33758	33758					0.18055164684824376
RRKKRRQR	8	Unmodified	_RRKKRRQR_					0	0	0		SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant;SCN3A|p.Y1443Tfs*18|1|0.09|ENSG00000153253|chr2:165095615-165095615|A/-|frameshift_variant;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	592.3923217654228	2	592.389588	1182.76462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.54	1	64.54	64.04	65.04	0								0	0	0	1.0178	1	26903	26903		0.69038	0	1				29422	3353	14596	14655	33759	33759					0.18055164684824376
RRKKRRQREHL	11	Unmodified	_RRKKRRQREHL_					0	0	0		SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant;SCN3A|p.Y1443Tfs*18|1|0.09|ENSG00000153253|chr2:165095615-165095615|A/-|frameshift_variant;nc|ENSG00000153253|Q9NY46-4|SCN3A;nc|ENSG00000153253|Q9NY46-2|SCN3A;nc|ENSG00000153253|Q9NY46|SCN3A;ENSG00000153253|ENST00000283254|SCN3A	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	SCN3A|p.D595Vfs*70|1|0.05|ENSG00000153253|chr2:165140886-165140887|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.7461730837822	4	391.494825	1561.95019	0.11538	4.5172E-05	1.0164	0.00039792	1.1318	0.00044309	391.4956720521357	45.266	1.2964	45.266	44.964	46.261	0					187	40	7	0	0	0	1.0405	2	18853	18853;18929		0	0	1	203700000			29423	3353	14597	14656	33760;33761	33760					0.19169522413631057
RRKKVAHL	8	Unmodified	_RRKKVAHL_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	336.5558654665947	3	336.557682	1006.65122	-1.8173	-0.00061163	-2.8277	-0.0009517	-4.6451	-0.0015633	336.55620109951576	37.736	0.44577	37.736	37.631	38.076	0					22	14	2	0	0	0	0.89152	1	15828	15828		1.6526	0	1	1212900	+		29424	11552	14598	14657	33762	33762					0.14815676519071985
RRKKVAHL	8	Unmodified	_RRKKVAHL_					0	0	0			REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	REV__nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.3321105837822	2	504.332885	1006.65122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.15	1	101.15	100.65	101.65	0								0	0	0	1.0178	1	42348	42348		0.69038	0	1		+		29425	11552	14598	14657	33763	33763					0.14815676519071985
RRKKVAPPLI	10	Unmodified	_RRKKVAPPLI_					0	0	0		nc|ENSG00000188994|O60281-2|ZNF292;ENSG00000188994|ENST00000369577|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	nc|ENSG00000188994|O60281-2|ZNF292	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3958007693291	2	589.398225	1176.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.31	1	107.31	106.81	107.81	0								0	0	0	0.66237	1	45972	45972		0.45834	0	1				29426	4889	14599	14658	33764	33764					0.2005764744726548
RRKLFYIKRKA	11	Unmodified	_RRKLFYIKRKA_					0	0	0		ENST00000367545.7_1_6:145173639-145173798:+|nuORF	ENST00000367545.7_1_6:145173639-145173798:+|nuORF	ENST00000367545.7_1_6:145173639-145173798:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.6515991091728	3	493.652533	1477.93577	1.1204	0.00055308	0.15637	7.7194E-05	1.2767	0.00063027	493.6524359363711	97.674	0.12174	97.674	97.599	97.721	0					12	3	4	0	0	0	1.0402	1	40831	40831		0.094841	0.094841	1	24708000			29427	6066	14600	14659	33765	33765					0.21592057212774307
RRKLHQRNKRQ	11	Unmodified	_RRKLHQRNKRQ_					0	0	0		ENST00000459737.5_1_14:56079280-56084690:+|nuORF	ENST00000459737.5_1_14:56079280-56084690:+|nuORF	ENST00000459737.5_1_14:56079280-56084690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3116943240166	3	507.309941	1518.90799	2.4462	0.001241	0.73625	0.00037351	3.1825	0.0016145	507.31038140851825	90.796	1.1557	90.796	90.032	91.188	0					80	36	3	0	0	0	1.0402	1	37920	37920		0.094841	0	1	2075400			29428	6659	14601	14660	33766	33766					0.16929547005247514
RRKLLPGRIQ	10	Unmodified	_RRKLLPGRIQ_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1236.805224597454	1	1236.80113	1235.79386	2.7412	0.0033903	0.44394	0.00054906	3.1851	0.0039393	1236.8014907784698	107.38	0.1517	107.53	107.45	107.6	0.15781					23	7	4	0	0	0	0.89803	1	46182	46182		0	0	1	27480000			29429	0	14602	14661	33767	33767					0.18539264190485483
RRKLLPGRIQ	10	Unmodified	_RRKLLPGRIQ_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1236.80113	1235.79386	1.3525	0.0016728	-1.0734	-0.0013276	0.27914	0.00034524	1236.7991943945094	107.43	0.10167	107.43	107.37	107.47	0	-0.054899	-0.0021683	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1676800			29430	0	14602	14661							0.18539264190485483
RRKLLPGRIQ	10	Unmodified	_RRKLLPGRIQ_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1236.80113	1235.79386	3.9271	0.0048571	1.2118	0.0014988	5.139	0.0063559	1236.8025815895737	107.4	0.10619	107.45	107.39	107.5	0.052452	-0.03418	0.00065805	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3675600			29431	0	14602	14661							0.18539264190485483
RRKLLPGRIQ	10	Unmodified	_RRKLLPGRIQ_					0	0	0		A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-5|A1CF;A1CF|p.L570Sfs*7|1|0.23|ENSG00000148584|chr10:50806805-50806806|AA/-|frameshift_variant;nc|ENSG00000148584|Q9NQ94-3|A1CF;ENSG00000148584|ENST00000373997|A1CF;nc|ENSG00000148584|Q9NQ94|A1CF;nc|ENSG00000148584|Q9NQ94-4|A1CF	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	A1CF|p.L286*|1|0.29|ENSG00000148584|chr10:50820562-50820562|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1236.80113	1235.79386	2.1824	0.0026992	1.3566	0.0016778	3.539	0.0043771	1236.8031645057213	107.36	0.15074	107.52	107.45	107.6	0.15795	0.038716	0.00083709	NaN	0	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15867000			29432	0	14602	14661							0.18539264190485483
RRKLTVYPLL	10	Unmodified	_RRKLTVYPLL_					0	0	0			REV__ENST00000496632.1_1_1:161093721-161094206:-|nuORF	REV__ENST00000496632.1_1_1:161093721-161094206:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	420.2756530642509	3	420.271319	1257.79213	4.0577	0.0017053	3.2818	0.0013792	7.3394	0.0030845	420.27299531238293	91.646	0.39656	92.582	92.403	92.8	0.93624					28	12	3	0	0	0	0.89803	1	38628	38628		0.77653	0.078866	1	2910300	+		29433	10562	14603	14662	33768	33768					0.17354210381859048
RRKMVLVF	8	Unmodified	_RRKMVLVF_					0	0	0			REV__ENSG00000165300|ENST00000683689|SLITRK5	REV__ENSG00000165300|ENST00000683689|SLITRK5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.8290893435478	2	524.826047	1047.63754	2.7608	0.001449	2.4706	0.0012967	5.2315	0.0027456	524.8273818981037	82.672	0.61899	84.342	84.049	84.668	1.67					74	19	5	0	0	0	0.88958	1	34734	34734		2.8892	0	1	113350000	+		29434	10775	14604	14663	33769	33769					0.11562682695648618
RRKQQPPP	8	Unmodified	_RRKQQPPP_					0	0	0		CRKL-LZTR1|1|fusion;ENST00000464807.1_1_22:21348995-21349371:+|nuORF;ENST00000479606.5_1_22:21333956-21351634:+|nuORF;ENSG00000099949|ENST00000646124|LZTR1	CRKL-LZTR1|1|fusion	CRKL-LZTR1|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2020446658134	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.549	1	32.364	31.864	32.864	1.8151								0	0	0	1.0178	1	12805	12805		0.40072	0	1				29435	374	14605	14664	33770	33770					0.08062806868417738
RRKRFKLLFKL	11	Unmodified	_RRKRFKLLFKL_					0	0	0			REV__sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	REV__sp|Q7M6G6|US34A_HCMVAUncharacterizedproteinUS34AOS=Humancytomegalovirus(strainAD169)OX=10360GN=US34APE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	502.3392516970634	3	502.336545	1503.98781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.38	1	107.43	106.93	107.93	0.052452								0	0	0	0.63775	1	45919	45919		0	0	1		+		29436	14664	14606	14665	33771	33771					0.2559722062653691
RRKRFVLCLII	11	Unmodified	_RRKRFVLCLII_					0	0	0		ENST00000233557.7_1_2:27656618-27656883:+|nuORF	ENST00000233557.7_1_2:27656618-27656883:+|nuORF	ENST00000233557.7_1_2:27656618-27656883:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9720336794853	3	472.970986	1415.89113	2.2008	0.0010409	0.49922	0.00023612	2.7	0.001277	472.9711508216361	39.322	1.4707	39.322	38.861	40.331	0					167	46	4	0	0	0	1.0405	1	16702	16702		0	0	1	10069000			29437	5553	14607	14666	33772	33772					0.19981910075125597
RRKRFVLCLII	11	Unmodified	_RRKRFVLCLII_					0	0	0		ENST00000233557.7_1_2:27656618-27656883:+|nuORF	ENST00000233557.7_1_2:27656618-27656883:+|nuORF	ENST00000233557.7_1_2:27656618-27656883:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9723693728447	3	472.970986	1415.89113	2.2546	0.0010664	0.57332	0.00027117	2.8279	0.0013375	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	1.0405	1	17429	17429		0	0	1	4678700			29438	5553	14607	14666	33773	33773					0.19981910075125597
RRKRKKQPRIR	11	Unmodified	_RRKRKKQPRIR_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	761.5115844607353	2	761.505484	1520.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.683	1	95.424	94.924	95.924	0.74124								0	0	0	0.63775	1	39834	39834		0	0	1		+		29439	10580	14608	14667	33774	33774					0.2567558731570898
RRKRLRHRGR	10	Unmodified	_RRKRLRHRGR_					0	0	0		nc|ENSG00000088053|Q9HCN6-2|GP6;nc|ENSG00000088053|Q9HCN6|GP6	nc|ENSG00000088053|Q9HCN6-2|GP6	nc|ENSG00000088053|Q9HCN6-2|GP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.4757873415947	4	348.476435	1389.87663	0.77962	0.00027168	-1.0574	-0.00036847	-0.27775	-9.6789E-05	348.4760796759304	30.759	0.97569	31.045	30.469	31.444	0.2859					88	32	3	0	0	0	0.89803	2	12792	12792;12845		0.15932	0	1	3326500			29440	7834	14609	14668	33775;33776	33775					0.19729018761813677
RRKRLRHRGR	10	Unmodified	_RRKRLRHRGR_					0	0	0		nc|ENSG00000088053|Q9HCN6-2|GP6;nc|ENSG00000088053|Q9HCN6|GP6	nc|ENSG00000088053|Q9HCN6-2|GP6	nc|ENSG00000088053|Q9HCN6-2|GP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.4763366580009	4	348.476435	1389.87663	0.32226	0.0001123	-1.0286	-0.00035845	-0.70635	-0.00024615	348.4760079941895	29.243	1.058	31.042	30.206	31.264	1.7987					97	34	4	0	0	0	0.89803	1	12203	12203		0.13989	0	1	4132000			29441	7834	14609	14668	33777	33777					0.19729018761813677
RRKRRKRRRFN	11	Unmodified	_RRKRRKRRRFN_					0	0	0			REV__ENST00000488854.6_1_3:113082116-113098301:-|nuORF	REV__ENST00000488854.6_1_3:113082116-113098301:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	815.0197631716728	2	815.017081	1628.01961	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.158	1	99.384	98.884	99.884	0.22545								0	0	0	0.63775	1	41723	41723		0	0	1		+		29442	13414	14610	14669	33778	33778					0.23072026153045044
RRKRRQGWL	9	Unmodified	_RRKRRQGWL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3836547732353	2	628.383971	1254.75339	2.1238	0.0013346	-2.3434	-0.0014726	-0.21958	-0.00013798	628.3824234295301	76.999	0.80923	76.999	76.254	77.063	0					36	25	2	0	0	0	0.84963	1	31993	31993		0.6015	0	1	2041900			29443	7542	14611	14670	33779	33779					0.1362034259068423
RRKRRQGWL	9	Unmodified	_RRKRRQGWL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3838989138603	2	628.383971	1254.75339	2.1091	0.0013253	-2.2773	-0.001431	-0.1682	-0.00010569	628.3824332062296	77.21	1.061	77.21	76.688	77.749	0					67	33	3	0	0	0	0.84963	2	32147	32147;32211		0.6015	0	1	2391000			29444	7542	14611	14670	33780;33781	33780					0.1362034259068423
RRKRRQGWL	9	Unmodified	_RRKRRQGWL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3843871951103	2	628.383971	1254.75339	2.0882	0.0013122	-0.85851	-0.00053947	1.2297	0.0007727	628.383629909381	78.048	0.72401	78.048	77.717	78.441	0					41	22	2	0	0	0	0.84963	1	32513	32513		0.6015	0	1	1047600			29445	7542	14611	14670	33782	33782					0.1362034259068423
RRKRRQGWL	9	Unmodified	_RRKRRQGWL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3810912966728	2	628.383971	1254.75339	2.0099	0.001263	-1.7612	-0.0011067	0.24872	0.00015629	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	0.84963	2	31870	31870;32390		0.6015	0	1	2978200			29446	7542	14611	14670	33783;33784	33783					0.1362034259068423
RRKRRQGWL	9	Unmodified	_RRKRRQGWL_					0	0	0		ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	ENST00000601072.1_1_19:53703894-53707275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3841430544853	2	628.383971	1254.75339	1.7095	0.0010742	-1.1342	-0.00071269	0.57534	0.00036154	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.84963	4	33347	33347;33558;33612;33663		0.6015	0	1	7710600			29447	7542	14611	14670	33785;33786;33787;33788	33785					0.1362034259068423
RRKTFHPLRL	10	Unmodified	_RRKTFHPLRL_					0	0	0			REV__ENSG00000109111|ENST00000314616|SUPT6H	REV__ENSG00000109111|ENST00000314616|SUPT6H	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.9402343630791	3	441.942195	1322.80476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.757	1	46.757	46.257	47.257	0								0	0	0	0.66151	1	19544	19544		1.9064	0.69154	1		+		29448	9268	14612	14671	33789	33789					0.1562666656473084
RRKWLRISP	9	Unmodified	_RRKWLRISP_					0	0	0		ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5369445681572	4	303.69255	1210.74109	0.21259	6.4562E-05	3.1672	0.00096187	3.3798	0.0010264	303.6933461088874	25.88	0.66138	26.132	25.921	26.582	0.25197					39	21	2	0	0	0	0.11909	1	10754	10754		2.4985	0.75621	1	4742600			29449	5496	14613	14672	33790	33790					0.14415306127648364
RRKWLRISP	9	Unmodified	_RRKWLRISP_					0	0	0		ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.2734557986259	3	404.587641	1210.74109	1.0358	0.00041909	2.5488	0.0010312	3.5846	0.0014503	404.5884295882331	25.928	0.51313	26.18	25.921	26.434	0.25197					24	16	2	0	0	0	0.11909	1	10895	10895		2.4985	0	1	926380			29450	5496	14613	14672	33791	33791					0.14415306127648364
RRKWLRISP	9	Unmodified	_RRKWLRISP_					0	0	0		ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	ENST00000023939.8_1_20:55043665-55043737:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5377380251884	4	303.69255	1210.74109	-0.092927	-2.8221E-05	2.9335	0.00089089	2.8406	0.00086267	303.69321285010125	24.283	0.85012	25.968	25.692	26.542	1.6845					68	28	4	0	0	0	0.11909	1	10178	10178		2.4985	0	1	3819200			29451	5496	14613	14672	33792	33792					0.14415306127648364
RRKWSQKRKYR	11	Unmodified	_RRKWSQKRKYR_					0	0	0		ENST00000589042.5_3_2:179517806-179527536:-|nuORF	ENST00000589042.5_3_2:179517806-179527536:-|nuORF	ENST00000589042.5_3_2:179517806-179527536:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	530.9878417849541	3	531.318325	1590.93315	4.213	0.0022384	0.95443	0.0005071	5.1674	0.0027455	531.318652724805	93.074	1.1346	93.946	93.442	94.576	0.87176					47	34	2	0	0	0	0.14606	1	39264	39264		0	0	1	671980			29452	7469	14614	14673	33793	33793					0.16131601807819607
RRLAKRRYSR	10	Unmodified	_RRLAKRRYSR_					0	0	0		ENST00000543067.5_1_X:21392559-21392961:+|nuORF	ENST00000543067.5_1_X:21392559-21392961:+|nuORF	ENST00000543067.5_1_X:21392559-21392961:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	681.4205200076103	2	681.421085	1360.82762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.95	1	105.11	104.61	105.61	0.15859								0	0	0	0.66243	1	44598	44598		0.35063	0.043601	1				29453	7224	14615	14674	33794	33794					0.16163685682204232
RRLANLAFILH	11	Unmodified	_RRLANLAFILH_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2079955935478	4	331.705657	1322.79352	1.1785	0.00039091	1.489	0.00049393	2.6675	0.00088483	332.2068400206555	46.01	1.7584	46.339	45.724	47.482	0.32899					138	58	3	0	0	0	1.0156	1	19272	19272		2.8433	0	1	5569000	+		29454	11080	14616	14675	33795	33795					0.1450384447059605
RRLANLAFILH	11	Unmodified	_RRLANLAFILH_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.7064697146416	4	331.705657	1322.79352	1.4062	0.00046646	2.082	0.00069061	3.4882	0.0011571	331.7063434504406	41.32	0.77385	43.212	42.61	43.384	1.8927					68	24	3	0	0	0	1.0357	1	17160	17160		1.4551	0.24029	1	4148100	+		29455	11080	14616	14675	33796	33796					0.1450384447059605
RRLANLAFILH	11	Unmodified	_RRLANLAFILH_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	331.705657	1322.79352	0.86188	0.00028589	2.4623	0.00081676	3.3242	0.0011026	331.7065361128897	41.846	0.87445	43.172	42.493	43.367	1.3254	-0.020314	0.0002468	NaN	1.4551	64	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5695100	+		29456	11080	14616	14675							0.1450384447059605
RRLANLAFILH	11	Unmodified	_RRLANLAFILH_					0	0	0			REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	REV__nc|ENSG00000172987|Q8WWQ2-2|HPSE2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	331.705657	1322.79352	1.4062	0.00046646	2.082	0.00069061	3.4882	0.0011571	331.7063434504406	41.32	0.77385	43.212	42.61	43.384	1.8927	0.020314	-0.00025779	NaN	1.4551	68	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4148100	+		29457	11080	14616	14675							0.1450384447059605
RRLARLFV	8	Unmodified	_RRLARLFV_					0	0	0			REV__ENST00000326724.8_1_17:79108192-79108276:-|nuORF	REV__ENST00000326724.8_1_17:79108192-79108276:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2249938845634	3	344.225932	1029.65597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.557	1	18.455	17.955	18.955	0.89794								0	0	0	1.0178	1	7307	7307		0.45834	0.057624	1		+		29458	12433	14617	14676	33797	33797					0.14232560661844218
RRLCWRRRLL	10	Unmodified	_RRLCWRRRLL_					0	0	0			REV__ENST00000298746.4_1_10:116697986-116698055:+|nuORF	REV__ENST00000298746.4_1_10:116697986-116698055:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	714.4374877810478	2	714.435681	1426.85681	1.6016	0.0011443	-0.74817	-0.00053452	0.85345	0.00060974	714.4353119291501	97.674	0.12174	97.674	97.599	97.721	0					6	3	2	0	0	0	0.89803	1	40843	40843		0.40072	0.050084	1	3885200	+		29459	12307	14618	14677	33798	33798					0.1604550670685967
RRLGRNAKWVA	11	Unmodified	_RRLGRNAKWVA_					0	0	0		ENST00000453450.2_1_12:120031743-120072065:+|nuORF;ENSG00000224982|ENST00000426426|TMEM233	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8940917849541	2	663.896912	1325.77927	2.2498	0.0014936	-2.8503	-0.0018923	-0.60049	-0.00039866	663.8951592135703	81.369	1.3111	81.369	80.604	81.915	0					108	42	3	0	0	0	1.0362	1	33944	33944		1.3295	0.13619	1	2804200			29460	5288	14619	14678	33799	33799					0.12941192042285365
RRLGRNAKWVA	11	Unmodified	_RRLGRNAKWVA_					0	0	0		ENST00000453450.2_1_12:120031743-120072065:+|nuORF;ENSG00000224982|ENST00000426426|TMEM233	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8980590701103	2	663.896912	1325.77927	2.3028	0.0015288	-1.3581	-0.00090165	0.94472	0.00062719	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0362	2	35104	35104;35379		1.3295	0.13619	1	5935800			29461	5288	14619	14678	33800;33801	33800					0.12941192042285365
RRLGRNAKWVA	11	Unmodified	_RRLGRNAKWVA_					0	0	0		ENST00000453450.2_1_12:120031743-120072065:+|nuORF;ENSG00000224982|ENST00000426426|TMEM233	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	ENST00000453450.2_1_12:120031743-120072065:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8981811404228	2	663.896912	1325.77927	3.1315	0.002079	-0.99094	-0.00065789	2.1405	0.0014211	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	1.0362	2	34729	34729;34834		1.3295	0.13619	1	4734100			29462	5288	14619	14678	33802;33803	33802					0.12941192042285365
RRLHPRGRSS	10	Unmodified	_RRLHPRGRSS_					0	0	0		ENST00000286371.7_1_3:141595540-141622555:+|nuORF;ENST00000465172.5_1_3:141595540-141640837:+|nuORF	ENST00000286371.7_1_3:141595540-141622555:+|nuORF	ENST00000286371.7_1_3:141595540-141622555:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3574706912041	2	611.355411	1220.69627	2.1011	0.0012845	0.99339	0.00060731	3.0945	0.0018918	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	0.89803	1	33107	33107		1.4819	0	1	6519600			29463	5714	14620	14679	33804	33804					0.09474875314299425
RRLITYARE	9	Unmodified	_RRLITYARE_					0	0	0			REV__ENSG00000171608|ENST00000377346|PIK3CD	REV__ENSG00000171608|ENST00000377346|PIK3CD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3442870974541	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.83753	1	32143	32143		1.8442	0.19162	1	9065200	+		29464	11036	14621	14680	33805	33805					0.0914701675710603
RRLKHKRK	8	Unmodified	_RRLKHKRK_					0	0	0		ENST00000451383.1_1_2:67108241-67108316:-|nuORF	ENST00000451383.1_1_2:67108241-67108316:-|nuORF	ENST00000451383.1_1_2:67108241-67108316:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3802978396416	2	561.378158	1120.74176	3.2012	0.0017971	-0.3647	-0.00020474	2.8365	0.0015924	561.3778075039644	106.03	0.45152	106.19	106	106.45	0.15781					42	23	4	0	0	0	0.89198	1	45337	45337		0	0	1	595540000			29465	6611	14622	14681	33806	33806					0.1862214556736035
RRLKLHVK	8	Unmodified	_RRLKLHVK_					0	0	0			REV__nc|ENSG00000266094|Q8WWW0-2|RASSF5	REV__nc|ENSG00000266094|Q8WWW0-2|RASSF5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	350.2070800662041	3	350.573332	1048.69817	-1.723	-0.00060405	-1.795	-0.00062927	-3.518	-0.0012333	350.57233382508736	28.621	0.5516	28.621	28.319	28.87	0					41	17	3	0	0	0	2.3239	1	12052	12052		0.45834	0	1	1085000	+		29466	11996	14623	14682	33807	33807					0.17576536070214388
RRLKRKRRKMR	11	Unmodified	_RRLKRKRRKMR_					0	0	0		ENSG00000229117|ENST00000546591|RPL41	ENSG00000229117|ENST00000546591|RPL41	ENSG00000229117|ENST00000546591|RPL41	MSMS	GG20161007_CRH_Patient100_W632_01	3	792.5190307497978	2	792.520611	1583.02667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.924	1	99.122	98.622	99.622	0.19767								0	0	0	0.63775	1	41649	41649		0	0	1				29467	5301	14624	14683	33808	33808					0.2584762270923875
RRLLHRVLM	9	Unmodified	_RRLLHRVLM_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10;ENST00000372512.2_1_6:43412869-43415021:+|nuORF	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	399.2507202029228	3	398.585243	1192.7339	1.4479	0.00057711	0.4663	0.00018586	1.9142	0.00076297	398.58524590718866	34.461	0.42115	34.758	34.63	35.051	0.29701					30	15	2	0	0	0	0.11954	1	14457	14457		0.26902	0	1	2033100			29468	2233	14625	14684	33809	33809					0.14524250255567495
RRLLHRVLM	9	Unmodified	_RRLLHRVLM_					0	0	0		ENSG00000124574|ENST00000372530|ABCC10;nc|ENSG00000124574|Q5T3U5-2|ABCC10;ENST00000372512.2_1_6:43412869-43415021:+|nuORF	ENSG00000124574|ENST00000372530|ABCC10	ENSG00000124574|ENST00000372530|ABCC10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	398.585243	1192.7339	-0.10415	-4.1513E-05	1.5251	0.00060787	1.4209	0.00056636	398.58565124773844	34.832	0.4817	34.832	34.556	35.037	0	0.036879	0.00064433	NaN	0.26902	28	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2493100			29469	2233	14625	14684							0.14524250255567495
RRLLIELIPIV	11	Unmodified	_RRLLIELIPIV_					0	0	0			REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4784728884697	4	334.477512	1333.88094	0.06351	2.1243E-05	2.206	0.00073787	2.2695	0.00075911	334.4783780167093	24.6	1.5235	26.285	25.997	27.52	1.6845					192	50	5	0	0	0	1.0402	1	10595	10595		0.094841	0.021578	1	234860000	+		29470	8433	14626	14685	33810	33810					0.22735625621498912
RRLLKMLA	8	Unmodified	_RRLLKMLA_					0	0	0			REV__ENSG00000181518|ENST00000641687|OR8D4	REV__ENSG00000181518|ENST00000641687|OR8D4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	500.3267700076103	2	500.826047	999.63754	3.2067	0.001606	1.5089	0.00075571	4.7156	0.0023617	500.8270958978871	106.07	0.2739	106.22	106.14	106.41	0.15781					40	14	4	0	0	0	2.3239	1	45296	45296		0	0	1	476420000	+		29471	11324	14627	14686	33811	33811					0.1377068269563324
RRLLPLLY	8	Unmodified	_RRLLPLLY_					0	0	0			REV__ENSG00000262179|ENST00000573382|MYMX	REV__ENSG00000262179|ENST00000573382|MYMX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3411743044853	2	522.339844	1042.66514	1.4551	0.00076007	0.40853	0.00021339	1.8637	0.00097346	522.3397232740605	106.09	0.1442	106.09	106.03	106.17	0					24	6	5	0	0	0	0.89176	1	45177	45177		0.79363	0	1	162960000	+		29472	11988	14628	14687	33812	33812					0.14550909227523334
RRLLRLLVLG	10	Unmodified	_RRLLRLLVLG_					0	0	0		nc|ENSG00000006327|Q9NP84-2|TNFRSF12A;ENSG00000006327|ENST00000326577|TNFRSF12A	nc|ENSG00000006327|Q9NP84-2|TNFRSF12A	nc|ENSG00000006327|Q9NP84-2|TNFRSF12A	MSMS	GG20161007_CRH_Patient100_A02_01	1	604.9230224490166	2	604.919324	1207.8241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.94	1	14.94	14.44	15.44	0								0	0	0	0.66237	1	6201	6201		0.45834	0	1				29473	505	14629	14688	33813	33813					0.22849622855642338
RRLPYKLV	8	Unmodified	_RRLPYKLV_					0	0	0		ENST00000425595.5_1_12:54357896-54360399:-|nuORF	ENST00000425595.5_1_12:54357896-54360399:-|nuORF	ENST00000425595.5_1_12:54357896-54360399:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8391601443291	2	522.837468	1043.66038	3.2554	0.001702	-0.52156	-0.00027269	2.7338	0.0014294	522.8372127309204	108.92	0.20258	109.08	108.95	109.15	0.15898					23	9	3	0	0	0	0.89178	1	47181	47181		0.69038	0	1	24834000			29474	6464	14630	14689	33814	33814					0.1403002508473037
RRLPYKLV	8	Unmodified	_RRLPYKLV_					0	0	0		ENST00000425595.5_1_12:54357896-54360399:-|nuORF	ENST00000425595.5_1_12:54357896-54360399:-|nuORF	ENST00000425595.5_1_12:54357896-54360399:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.8383666872978	2	522.837468	1043.66038	3.1978	0.001672	-1.7434	-0.00091153	1.4544	0.00076042	522.8369451559491	108.88	0.20358	109.03	108.91	109.12	0.1548					23	9	3	0	0	0	0.89178	1	47088	47088		0.69038	0	1	23127000			29475	6464	14630	14689	33815	33815					0.1403002508473037
RRLQKRRRHRI	11	Unmodified	_RRLQKRRRHRI_					0	0	0			REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	REV__ENST00000593209.5_2_17:40340836-40341070:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.0961486697197	5	315.806839	1573.99781	-1.9986	-0.00063118	2.1216	0.00067003	0.12301	3.8848E-05	315.8074609504254	50.281	3.0044	50.281	49.691	52.695	0					176	96	2	0	0	0	0.14606	1	20780	20780		0	0	1	7926400	+		29476	14082	14631	14690	33816	33816					0.23377221404484771
RRLQTRKEKAQ	11	Unmodified	_RRLQTRKEKAQ_					0	0	0		MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67;MKI67|p.R2903Efs*7|1|0.07|ENSG00000148773|chr10:128103134-128103135|-/T|frameshift_variant;MKI67|p.D2897Gfs*53|1|0.03|ENSG00000148773|chr10:128103129-128103150|TGTCTCCTGCTGCCAATTACAT/-|frameshift_variant;ENSG00000148773|ENST00000368654|MKI67	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.9536926150322	3	471.951419	1412.83243	4.3467	0.0020514	0.48601	0.00022937	4.8327	0.0022808	471.9515348005704	93.765	0.31897	94.636	94.448	94.767	0.87176					16	9	2	0	0	0	1.0402	1	39474	39474		0.094841	0	1	611310			29477	3220	14632	14691	33817	33817					0.14252525034316932
RRLRLLQRLP	10	Unmodified	_RRLRLLQRLP_					0	0	0		ENST00000528698.5_1_11:407426-409994:-|nuORF	ENST00000528698.5_1_11:407426-409994:-|nuORF	ENST00000528698.5_1_11:407426-409994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2237121462822	4	330.972928	1319.86261	0.12312	4.0749E-05	0.25666	8.4947E-05	0.37978	0.0001257	331.22354703715115	22.295	1.1264	22.518	21.992	23.119	0.223					50	37	2	0	0	0	0.89803	2	9345	9345;9391		0.69767	0.53834	1	1957000			29478	7148	14633	14692	33818;33819	33818					0.21546928490147366
RRLRNIRRA	9	Unmodified	_RRLRNIRRA_					0	0	0		ENSG00000144815|ENST00000273347|NXPE3	ENSG00000144815|ENST00000273347|NXPE3	ENSG00000144815|ENST00000273347|NXPE3	MSMS	GG20161007_CRH_Patient100_W632_02	4	404.1788207888603	3	404.262039	1209.76429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.719	1	95.907	95.407	96.407	1.1887								0	0	0	0.42693	1	39849	39849		0.26902	0	1				29479	3095	14634	14693	33820	33820					0.1677974496499246
RRLRPLPPKQR	11	Unmodified	_RRLRPLPPKQR_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9720947146416	3	472.972266	1415.89497	2.2546	0.0010664	-2.1328	-0.0010088	0.12176	5.7591E-05	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	1.0365	1	17112	17112		1.2148	0.65166	1	4678700			29480	5171	14635	14694	33821	33821					0.20365715893126435
RRLRPLPPKQR	11	Unmodified	_RRLRPLPPKQR_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3066894412041	3	472.972266	1415.89497	0.60299	0.0002852	-2.9017	-0.0013724	-2.2987	-0.0010872	472.9708355201625	33.955	0.30082	35.229	35.051	35.352	1.2746					72	32	3	0	0	0	1.039	2	14192	14192;14232		0.45452	0.33165	1	30915000			29481	5171	14635	14694	33822;33823	33822					0.20365715893126435
RRLRPLPPKQR	11	Unmodified	_RRLRPLPPKQR_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.9709350466728	3	472.972266	1415.89497	1.1064	0.0005233	-3.1665	-0.0014977	-2.0601	-0.00097436	472.97063471594606	33.475	0.28645	35.298	35.202	35.489	1.8227					66	24	4	0	0	0	1.039	1	14007	14007		0.45452	0.33165	1	63957000			29482	5171	14635	14694	33824	33824					0.20365715893126435
RRLRRAAR	8	Unmodified	_RRLRRAAR_					0	0	0		ENSG00000133980|ENST00000256362|VRTN	ENSG00000133980|ENST00000256362|VRTN	ENSG00000133980|ENST00000256362|VRTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	352.2325012087822	3	352.23208	1053.67441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.022	1	87.569	87.069	88.069	1.547								0	0	0	1.0178	1	36226	36226		0.40072	0	1				29483	2589	14636	14695	33825	33825					0.14972115356385984
RRLRRAVRRQ	10	Unmodified	_RRLRRAVRRQ_					0	0	0		VRTN|p.A515V|1|0.42|ENSG00000133980|chr14:74358327-74358327|C/T|missense_variant	VRTN|p.A515V|1|0.42|ENSG00000133980|chr14:74358327-74358327|C/T|missense_variant	VRTN|p.A515V|1|0.42|ENSG00000133980|chr14:74358327-74358327|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2986938357353	3	456.295743	1365.8654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.63	1	103.79	103.29	104.29	0.16055								0	0	0	0.66254	1	43726	43726		0.15932	0.064481	1				29484	17356	14637	14696	33826	33826					0.19710196667665514
RRLRRFLFLRR	11	Unmodified	_RRLRRFLFLRR_					0	0	0			REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3420898318291	3	530.342693	1588.00625	3.4425	0.0018257	-2.4796	-0.001315	0.96289	0.00051066	530.340566929482	105.69	0.11331	105.86	105.79	105.9	0.16679					17	5	4	0	0	0	1.0405	1	45026	45026		0	0	1	18628000	+		29485	12642	14638	14697	33827	33827					0.23576775321066634
RRLRRFLFLRR	11	Unmodified	_RRLRRFLFLRR_					0	0	0			REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	530.342693	1588.00625	1.2833	0.00068058	0.30379	0.00016111	1.5871	0.00084169	530.3418806449669	105.77	0.09288	105.77	105.7	105.79	0	-0.059591	0.0027963	NaN	0	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3661400	+		29486	12642	14638	14697							0.23576775321066634
RRLRRFLFLRR	11	Unmodified	_RRLRRFLFLRR_					0	0	0			REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	530.342693	1588.00625	3.1766	0.0016847	-2.3121	-0.0012262	0.86453	0.0004585	530.3399189918005	105.71	0.26415	105.87	105.75	106.02	0.15859	0.034477	-0.0013657	NaN	0	19	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25537000	+		29487	12642	14638	14697							0.23576775321066634
RRLRRFLFLRR	11	Unmodified	_RRLRRFLFLRR_					0	0	0			REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	REV__ENST00000368655.4_1_1:153800818-153895301:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	530.342693	1588.00625	3.4425	0.0018257	-2.4796	-0.001315	0.96289	0.00051066	530.340566929482	105.69	0.11331	105.86	105.79	105.9	0.16679	0.025114	-0.0016322	NaN	0	17	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18628000	+		29488	12642	14638	14697							0.23576775321066634
RRLRRWGLLPR	11	Unmodified	_RRLRRWGLLPR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.6507751345634	3	493.647894	1477.92185	3.3964	0.0016766	3.4353	0.0016958	6.8316	0.0033724	493.64933660409787	97.641	0.15793	97.731	97.62	97.778	0.090881					13	4	4	0	0	0	1.0402	1	40845	40845		0.094841	0.011491	1	29189000			29489	4998	14639	14698	33828	33828					0.2020082450433165
RRLRRWGLLPR	11	Unmodified	_RRLRRWGLLPR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.6496154665947	3	493.647894	1477.92185	3.7147	0.0018337	0.90065	0.00044461	4.6153	0.0022783	493.6484966611622	97.501	0.13404	97.785	97.694	97.828	0.28442					8	4	2	0	0	0	1.0402	1	41028	41028		0.094841	0	1	7706800			29490	4998	14639	14698	33829	33829					0.2020082450433165
RRLRRWGLLPR	11	Unmodified	_RRLRRWGLLPR_					0	0	0		ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	ENSG00000197324|ENST00000359591|LRP10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	493.647894	1477.92185	3.3368	0.0016472	0.76889	0.00037956	4.1057	0.0020268	493.6479271537647	97.395	0.12038	97.701	97.654	97.774	0.3062	-0.038	-0.0018021	NaN	0.094841	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7908100			29491	4998	14639	14698							0.2020082450433165
RRLRVRHTLLA	11	Unmodified	_RRLRVRHTLLA_					0	0	0			REV__PRAMEF20|p.R232Sfs*10|1|0.05|ENSG00000204478|chr1:13418529-13418530|-/T|frameshift_variant	REV__PRAMEF20|p.R232Sfs*10|1|0.05|ENSG00000204478|chr1:13418529-13418530|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	348.2068359255791	4	348.477106	1389.87932	-1.6342	-0.00056947	-0.48548	-0.00016918	-2.1196	-0.00073865	348.4770199320388	31.871	0.9969	31.871	31.66	32.657	0					86	31	3	0	0	0	0.14606	1	13614	13614		0.094841	0	1	12753000	+		29492	11784	14640	14699	33830	33830					0.19997429376144282
RRLVIYIK	8	Unmodified	_RRLVIYIK_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8531371951103	2	530.853119	1059.69168	2.8722	0.0015247	-1.1775	-0.00062505	1.6947	0.00089964	530.8524607611463	107.58	0.2511	107.63	107.5	107.75	0.052452					41	12	5	0	0	0	0.89198	1	46089	46089		0	0	1	475120000	+		29493	14461	14641	14700	33831	33831					0.16422598118811038
RRLWRLAY	8	Unmodified	_RRLWRLAY_					0	0	0			REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3369628787041	2	567.338167	1132.66178	1.764	0.0010008	-4.251	-0.0024117	-2.487	-0.001411	567.3355505966737	80.13	0.21846	80.431	80.353	80.571	0.30047					10	6	2	0	0	0	0.89178	1	33509	33509		0.69038	0	1	300630	+		29494	11211	14642	14701	33832	33832					0.10075659173480744
RRLWRLAY	8	Unmodified	_RRLWRLAY_					0	0	0			REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	567.338167	1132.66178	1.5494	0.00087902	-5.2015	-0.002951	-3.6521	-0.002072	567.3355162808916	80.358	0.25272	80.358	80.226	80.478	0	-0.036511	-0.00037757	NaN	0.69038	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	316610	+		29495	11211	14642	14701							0.10075659173480744
RRLWRLAY	8	Unmodified	_RRLWRLAY_					0	0	0			REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	REV__ENST00000580713.1_1_17:18212093-18218098:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	567.338167	1132.66178	1.764	0.0010008	-4.251	-0.0024117	-2.487	-0.001411	567.3355505966737	80.13	0.21846	80.431	80.353	80.571	0.30047	0.036511	0.000701	NaN	0.69038	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300630	+		29496	11211	14642	14701							0.10075659173480744
RRMKRRRKRLP	11	Unmodified	_RRMKRRRKRLP_					0	0	0			REV__ENST00000463639.1_1_6:32945663-32945765:+|nuORF	REV__ENST00000463639.1_1_6:32945663-32945765:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1347228884697	5	311.40417	1551.98447	-2.0448	-0.00063676	1.4708	0.00045802	-0.57399	-0.00017874	311.6054043395352	52.316	0.28489	52.316	52.13	52.415	0					11	8	2	0	0	0	0.14606	1	21828	21828		0	0	1	287840	+		29497	13217	14643	14702	33833	33833					0.2305564730088463
RRNVGLGV	8	Unmodified	_RRNVGLGV_					0	0	0		ENST00000570439.1_1_17:7251916-7252060:+|nuORF	ENST00000570439.1_1_17:7251916-7252060:+|nuORF	ENST00000570439.1_1_17:7251916-7252060:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7674438357353	2	435.767043	869.519533	1.0663	0.00046466	0.45089	0.00019648	1.5172	0.00066114	435.76692529630117	70.367	1.2651	70.367	69.675	70.94	0					89	40	3	0	0	0	0.89178	1	29286	29286		0.69038	0	1	4790100			29498	7391	14644	14703	33834	33834					0.07955446431344626
RRPERPLR	8	Unmodified	_RRPERPLR_					0	0	0		ENST00000329687.8_1_4:2935791-2936172:-|nuORF	ENST00000329687.8_1_4:2935791-2936172:-|nuORF	ENST00000329687.8_1_4:2935791-2936172:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3310424685478	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89178	1	29523	29523		0.69038	0	1	3238400			29499	5885	14645	14704	33835	33835					0.11101587025336812
RRPGGGGG	8	Unmodified	_RRPGGGGG_					0	0	0		ENST00000370915.5_1_20:60697546-60697723:+|nuORF;ENST00000606557.1_1_20:17949016-17949277:-|nuORF;ENST00000377759.8_1_20:17937680-17949307:-|nuORF;ENST00000606602.1_1_20:17948785-17949358:-|nuORF;ENST00000486039.1_1_20:17948856-17949322:-|nuORF;ENST00000579055.5_1_17:72281302-72310327:+|nuORF	ENST00000370915.5_1_20:60697546-60697723:+|nuORF	ENST00000370915.5_1_20:60697546-60697723:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	357.2842590212822	2	357.193711	712.372869	1.9131	0.00068335	1.4749	0.00052684	3.388	0.0012102	357.1942787641511	111.69	0.52492	111.86	111.66	112.18	0.16445					27	16	2	0	0	0	2.3239	1	48424	48424		0	0	1	339620			29500	6121	14646	14705	33836	33836					0.005177692662414302
RRPGRRPL	8	Unmodified	_RRPGRRPL_					0	0	0		ENST00000527418.5_1_1:155023541-155024009:+|nuORF	ENST00000527418.5_1_1:155023541-155024009:+|nuORF	ENST00000527418.5_1_1:155023541-155024009:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3220397830009	2	504.320309	1006.62606	3.1534	0.0015903	-0.35873	-0.00018092	2.7947	0.0014094	504.3199021366408	72.547	0.92802	73.877	73.267	74.195	1.3297					52	29	3	0	0	0	0.88958	1	30483	30483		2.8892	0	1	1070700			29501	7139	14647	14706	33837	33837					0.12301621716494537
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9470092654228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.68	1	18.68	18.18	19.18	0								0	0	0	0.6624	1	7765	7765		0.40072	0	1		+		29502	12602	14648	14707	33838	33838					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456054568291	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.864	1	18.864	18.364	19.364	0								0	0	0	0.6624	1	7840	7840		0.40072	0	1		+		29503	12602	14648	14707	33839	33839					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9424926638603	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.019	1	19.019	18.519	19.519	0								0	0	0	0.6624	1	7904	7904		0.40072	0	1		+		29504	12602	14648	14707	33840	33840					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9474365115166	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.582	1	19.582	19.082	20.082	0								0	0	0	0.6624	1	8139	8139		0.40072	0	1		+		29505	12602	14648	14707	33841	33841					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9445678591728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.735	1	19.735	19.235	20.235	0								0	0	0	0.6624	1	8202	8202		0.40072	0	1		+		29506	12602	14648	14707	33842	33842					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9473754763603	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.138	1	20.138	19.638	20.638	0								0	0	0	0.6624	1	8370	8370		0.40072	0	1		+		29507	12602	14648	14707	33843	33843					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9444457888603	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.601	1	20.601	20.101	21.101	0								0	0	0	0.6624	1	8564	8564		0.40072	0	1		+		29508	12602	14648	14707	33844	33844					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9427978396416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.362	1	15.493	14.993	15.993	0.13022								0	0	0	0.6624	1	6375	6375		0.40072	0	1		+		29509	12602	14648	14707	33845	33845					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9438354372978	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.587	1	15.717	15.217	16.217	0.13022								0	0	0	0.6624	1	6468	6468		0.40072	0	1		+		29510	12602	14648	14707	33846	33846					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9457275271416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.708	1	15.838	15.338	16.338	0.13022								0	0	0	0.6624	1	6518	6518		0.40072	0	1		+		29511	12602	14648	14707	33847	33847					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9442016482353	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.866	1	15.996	15.496	16.496	0.13022								0	0	0	0.6624	1	6584	6584		0.40072	0	1		+		29512	12602	14648	14707	33848	33848					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9467040896416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.436	1	16.58	16.08	17.08	0.14307								0	0	0	0.6624	1	6821	6821		0.40072	0	1		+		29513	12602	14648	14707	33849	33849					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9465209841728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.006	1	17.157	16.657	17.657	0.15093								0	0	0	0.6624	1	7055	7055		0.40072	0	1		+		29514	12602	14648	14707	33850	33850					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9446288943291	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.128	1	17.279	16.779	17.779	0.15093								0	0	0	0.6624	1	7103	7103		0.40072	0	1		+		29515	12602	14648	14707	33851	33851					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9457275271416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.779	1	17.952	17.452	18.452	0.17285								0	0	0	0.6624	1	7379	7379		0.40072	0	1		+		29516	12602	14648	14707	33852	33852					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9460937380791	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.981	1	18.153	17.653	18.653	0.17285								0	0	0	0.6624	1	7462	7462		0.40072	0	1		+		29517	12602	14648	14707	33853	33853					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451782107353	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.211	1	18.384	17.884	18.884	0.17285								0	0	0	0.6624	1	7559	7559		0.40072	0	1		+		29518	12602	14648	14707	33854	33854					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9438354372978	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.556	1	18.729	18.229	19.229	0.17285								0	0	0	0.6624	1	7703	7703		0.40072	0	1		+		29519	12602	14648	14707	33855	33855					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9448119997978	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.141	1	19.334	18.834	19.834	0.19342								0	0	0	0.6624	1	7948	7948		0.40072	0	1		+		29520	12602	14648	14707	33856	33856					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9462768435478	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.655	1	19.848	19.348	20.348	0.19342								0	0	0	0.6624	1	8166	8166		0.40072	0	1		+		29521	12602	14648	14707	33857	33857					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9469482302666	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.808	1	20.002	19.502	20.502	0.19342								0	0	0	0.6624	1	8230	8230		0.40072	0	1		+		29522	12602	14648	14707	33858	33858					0.23019215007184357
RRPIKQKLKR	10	Unmodified	_RRPIKQKLKR_					0	0	0			REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	REV__ENST00000361337.2_1_20:39708810-39709869:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9437744021416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.116	1	21.326	20.826	21.826	0.21024								0	0	0	0.6624	1	8772	8772		0.40072	0	1		+		29523	12602	14648	14707	33859	33859					0.23019215007184357
RRPKARRRRRL	11	Unmodified	_RRPKARRRRRL_					0	0	0		ENST00000606621.1_1_6:85472779-85472989:-|nuORF	ENST00000606621.1_1_6:85472779-85472989:-|nuORF	ENST00000606621.1_1_6:85472779-85472989:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5367004275322	5	305.004726	1519.98725	-3.0529	-0.00093115	2.0477	0.00062455	-1.0052	-0.0003066	305.2057625605911	22.924	0.24182	22.924	22.867	23.109	0					10	7	2	0	0	0	0.14606	1	9591	9591		0	0	1	719160			29524	7560	14649	14708	33860	33860					0.2480523875003655
RRPKMRPARR	10	Unmodified	_RRPKMRPARR_					0	0	0		ENSG00000196421|ENST00000636176|C20orf204	ENSG00000196421|ENST00000636176|C20orf204	ENSG00000196421|ENST00000636176|C20orf204	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.7068359255791	4	331.705829	1322.79421	1.6165	0.0005362	1.093	0.00036256	2.7095	0.00089876	331.7062428505499	43.852	0.85657	45.796	45.165	46.021	1.9438					59	27	4	0	0	0	0.8974	1	18440	18440		1.7423	0.41263	1	5173900			29525	4936	14650	14709	33861	33861					0.1457236063865821
RRPKPRSVRTG	11	Unmodified	_RRPKPRSVRTG_					0	0	0			REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2028686404228	4	328.203547	1308.78508	-2.0442	-0.00067092	0.69563	0.00022831	-1.3486	-0.00044261	328.20352267034457	39.607	1.16	39.607	39.171	40.331	0					130	36	5	0	0	0	1.0357	1	16532	16532		1.4551	0.24029	1	23377000	+		29526	13936	14651	14710	33862	33862					0.14304290553968713
RRPKPRSVRTG	11	Unmodified	_RRPKPRSVRTG_					0	0	0			REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2030822634697	4	328.203547	1308.78508	-1.9481	-0.00063939	0.79738	0.0002617	-1.1508	-0.00037768	328.20360582121924	42.223	1.6218	42.223	41.435	43.057	0					154	51	4	0	0	0	1.0191	1	17681	17681		2.6312	0.37851	1	11871000	+		29527	13936	14651	14710	33863	33863					0.14304290553968713
RRPKPRSVRTG	11	Unmodified	_RRPKPRSVRTG_					0	0	0			REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2032653689384	4	328.203547	1308.78508	0.99574	0.00032681	-1.8534	-0.00060828	-0.85763	-0.00028148	328.2027426683189	38.867	1.1585	39.175	38.857	40.015	0.30857					135	37	5	0	0	0	1.0191	1	16398	16398		2.6312	0.37851	1	20874000	+		29528	13936	14651	14710	33864	33864					0.14304290553968713
RRPKPRSVRTG	11	Unmodified	_RRPKPRSVRTG_					0	0	0			REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	REV__ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2024108767509	4	328.203547	1308.78508	-0.66977	-0.00021982	-2.7777	-0.00091165	-3.4475	-0.0011315	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	1.0224	1	15655	15655		2.4348	0.35082	1	30589000	+		29529	13936	14651	14710	33865	33865					0.14304290553968713
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9878417849541	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.0391	1	14324	14324		0.40827	0.31342	1	399160000			29530	517	14652	14711	33866	33866					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	362.9879028201103	4	362.987572	1447.92118	1.0375	0.00037658	-2.2419	-0.00081379	-1.2045	-0.00043721	362.98783047641336	32.586	2.2246	32.881	32.403	34.627	0.29431					288	74	6	0	0	0	1.0391	1	13947	13947		0.40827	0	1	559590000			29531	517	14652	14711	33867	33867					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.9871093630791	4	362.987572	1447.92118	-0.4714	-0.00017111	-1.3211	-0.00047955	-1.7925	-0.00065066	362.98807146049165	31.478	1.6863	32.759	32.343	34.03	1.2813					252	56	7	0	0	0	1.039	1	13081	13081		0.45452	0	1	563060000			29532	517	14652	14711	33868	33868					0.2151398506462101
RRPKRREIPLK	11	Unmodified	_RRPKRREIPLK_					0	0	0		nc|ENSG00000007171|P35228-2|NOS2;ENSG00000007171|ENST00000313735|NOS2	nc|ENSG00000007171|P35228-2|NOS2	nc|ENSG00000007171|P35228-2|NOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9879638552666	4	362.987572	1447.92118	0.48914	0.00017755	-1.7945	-0.00065139	-1.3054	-0.00047384	362.9876474891707	31.174	1.2269	32.998	32.865	34.092	1.8246					99	44	3	0	0	0	1.0394	1	13107	13107		0.32927	0.23443	1	335070000			29533	517	14652	14711	33869	33869					0.2151398506462101
RRPKYSRL	8	Unmodified	_RRPKYSRL_					0	0	0			REV__nc|ENSG00000128513|Q9NUX5-2|POT1	REV__nc|ENSG00000128513|Q9NUX5-2|POT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.3281738162041	2	538.327799	1074.64105	2.6193	0.0014101	-1.3507	-0.00072713	1.2686	0.00068294	538.3269606988542	86.013	0.60841	86.265	86.006	86.614	0.25227					74	19	5	0	0	0	0.89187	1	35945	35945		0.69038	0.16561	1	131330000	+		29534	9728	14653	14712	33870	33870					0.10671068793840277
RRPLAWPAWL	10	Unmodified	_RRPLAWPAWL_					0	0	0		ENST00000463932.1_1_2:242674639-242675412:+|nuORF;nc|ENSG00000180902|Q8N465-2|D2HGDH;nc|ENSG00000180902|Q8N465-3|D2HGDH;ENSG00000180902|ENST00000321264|D2HGDH	ENST00000463932.1_1_2:242674639-242675412:+|nuORF	ENST00000463932.1_1_2:242674639-242675412:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3700439333916	2	633.366924	1264.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.785	1	79.536	79.036	80.036	1.7514								0	0	0	0.66155	1	32624	32624		1.8442	0.19162	1				29535	4560	14654	14713	33871	33871					0.09752501379057321
RRPLKLPR	8	Unmodified	_RRPLKLPR_					0	0	0			REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	345.4837524294853	3	345.901449	1034.68252	0.56516	0.00019549	-2.5728	-0.00088993	-2.0076	-0.00069444	346.2362526711	27.33	0.33863	27.601	27.463	27.802	0.27119					15	10	2	0	0	0	2.3239	1	11510	11510		0	0	1	593820	+		29536	13140	14655	14714	33872	33872					0.16656249553147973
RRPLKLPR	8	Unmodified	_RRPLKLPR_					0	0	0			REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.9008972048759	3	345.901449	1034.68252	1.1525	0.00039864	-3.4115	-0.00118	-2.259	-0.0007814	345.9000806206738	44.317	0.51118	45.682	45.482	45.993	1.3653					41	15	4	0	0	0	0.89198	1	18643	18643		0	0	1	3454100	+		29537	13140	14655	14714	33873	33873					0.16656249553147973
RRPLKLPR	8	Unmodified	_RRPLKLPR_					0	0	0			REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	REV__ENST00000451837.5_1_22:24056493-24059477:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	345.901449	1034.68252	-0.077378	-2.6765E-05	-1.9012	-0.00065764	-1.9786	-0.0006844	346.23642625289983	26.707	0.12202	27.979	27.932	28.054	1.2715	0.18907	0.00052898	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	423570	+		29538	13140	14655	14714							0.16656249553147973
RRPPRRRIELV	11	Unmodified	_RRPPRRRIELV_					0	0	0			REV__ENSG00000270806|ENST00000605587|C17orf50	REV__ENSG00000270806|ENST00000605587|C17orf50	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2541686892509	4	362.732472	1446.90078	2.07	0.00075084	0.8145	0.00029545	2.8845	0.0010463	362.7327542133653	83.166	0.3393	83.436	83.214	83.553	0.27029					16	10	2	0	0	0	0.14606	1	34730	34730		0	0	1	524580	+		29539	12004	14656	14715	33874	33874					0.19520814404836528
RRPPRRRIELV	11	Unmodified	_RRPPRRRIELV_					0	0	0			REV__ENSG00000270806|ENST00000605587|C17orf50	REV__ENSG00000270806|ENST00000605587|C17orf50	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537414431572	4	362.732472	1446.90078	1.6222	0.00058841	0.82748	0.00030016	2.4496	0.00088856	363.2325794763934	79.275	0.407	80.542	80.378	80.785	1.2668					25	12	3	0	0	0	0.14606	1	33361	33361		0	0	1	325130	+		29540	12004	14656	14715	33875	33875					0.19520814404836528
RRPPRRRIELV	11	Unmodified	_RRPPRRRIELV_					0	0	0			REV__ENSG00000270806|ENST00000605587|C17orf50	REV__ENSG00000270806|ENST00000605587|C17orf50	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2534667849541	4	362.732472	1446.90078	1.9081	0.00069213	0.63382	0.00022991	2.5419	0.00092204	362.9836945423573	78.7	0.21748	80.435	80.289	80.506	1.735					11	6	2	0	0	0	0.14606	1	33013	33013		0	0	1	349450	+		29541	12004	14656	14715	33876	33876					0.19520814404836528
RRPPRRRIELV	11	Unmodified	_RRPPRRRIELV_					0	0	0			REV__ENSG00000270806|ENST00000605587|C17orf50	REV__ENSG00000270806|ENST00000605587|C17orf50	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2538940310478	4	362.732472	1446.90078	1.5294	0.00055476	0.91549	0.00033208	2.4449	0.00088684	362.73262406661456	80.682	0.39671	82.378	82.12	82.517	1.6959					19	12	2	0	0	0	0.14606	1	33894	33894		0	0	1	659910	+		29542	12004	14656	14715	33877	33877					0.19520814404836528
RRPRARMGLV	10	Unmodified	_RRPRARMGLV_					0	0	0		ENST00000405737.2_2_13:41635109-41635256:-|nuORF	ENST00000405737.2_2_13:41635109-41635256:-|nuORF	ENST00000405737.2_2_13:41635109-41635256:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3697997927666	2	606.366933	1210.71931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.853	1	75.853	75.353	76.353	0								0	0	0	0.66237	1	31575	31575		0.45834	0	1				29543	6361	14657	14716	33878	33878					0.12238178107440945
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4792968630791	4	334.479649	1333.88949	-2.5047	-0.00083777	1.9464	0.00065104	-0.55826	-0.00018673	334.48099796825176	22.889	1.7691	22.889	22.722	24.491	0					329	57	6	0	0	0	0.89803	6	9533	9533;9702;9897;10053;10092;10170		0.15932	0	1	206940000			29544	7642	14658	14717	33879;33880;33881;33882;33883;33884	33879					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4795715212822	4	334.479649	1333.88949	-2.4259	-0.00081142	2.099	0.00070206	-0.32697	-0.00010936	334.48107277347134	24.719	1.9579	24.719	24.367	26.325	0					284	63	6	0	0	0	0.89803	3	10209	10209;10248;10560		0.15932	0	1	149700000			29545	7642	14658	14717	33885;33886;33887	33885					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4799682497978	4	334.479649	1333.88949	-2.3632	-0.00079045	1.4905	0.00049853	-0.87274	-0.00029191	334.48073959403655	26.214	1.7252	26.214	25.534	27.259	0					255	56	6	0	0	0	0.89803	1	11184	11184		0.15932	0	1	123080000			29546	7642	14658	14717	33888	33888					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4804260134697	4	334.479649	1333.88949	-2.3175	-0.00077517	1.4896	0.00049825	-0.8279	-0.00027692	334.4807408906752	27.546	2.2533	27.546	27.231	29.484	0					249	73	6	0	0	0	0.89803	4	11522	11522;11825;11889;11941		0.15932	0	1	182450000			29547	7642	14658	14717	33889;33890;33891;33892	33889					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1205627322197	3	445.637106	1333.88949	0.75771	0.00033766	-0.96046	-0.00042802	-0.20275	-9.0353E-05	445.63660232191984	23.368	1.1686	23.368	23.26	24.429	0					107	37	3	0	0	0	0.12561	1	10173	10173		0.15932	0	1	7901000			29548	7642	14658	14717	33893	33893					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	667.9511596560478	2	667.952021	1333.88949	0.63294	0.00042278	-2.327	-0.0015543	-1.6941	-0.0011316	667.9500110520839	22.286	0.59057	22.509	22.259	22.85	0.223					53	19	4	0	0	0	0.89803	1	9323	9323		0	0	1	9148100			29549	7642	14658	14717	33894	33894					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4808532595634	4	334.479649	1333.88949	0.15656	5.2368E-05	-1.9559	-0.0006542	-1.7993	-0.00060183	334.48033157320106	22.286	1.7562	22.509	22.173	23.929	0.223					274	57	7	0	0	0	0.89803	2	9330	9330;9627		0.15932	0	1	820460000			29550	7642	14658	14717	33895;33896	33895					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4808227419853	4	334.479649	1333.88949	0.25986	8.6918E-05	-1.385	-0.00046326	-1.1252	-0.00037634	334.48065055399775	24.275	2.0568	24.517	23.73	25.787	0.24251					327	66	7	0	0	0	0.89803	4	9996	9996;10245;10402;10614		0.15932	0	1	444280000			29551	7642	14658	14717	33897;33898;33899;33900	33897					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	668.4508544802666	2	667.952021	1333.88949	0.73287	0.00048952	-2.0757	-0.0013865	-1.3428	-0.00089695	667.9507296721135	24.16	0.73144	24.402	24.073	24.804	0.24251					60	23	3	0	0	0	0.89803	1	10163	10163		0	0	1	1751200			29552	7642	14658	14717	33901	33901					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4791747927666	4	334.479649	1333.88949	0.36211	0.00012112	-3.3312	-0.0011142	-2.9691	-0.0009931	334.47876618496844	26.168	2.3423	26.43	25.684	28.027	0.26173					307	76	6	0	0	0	0.89803	8	10665	10665;10921;10973;11026;11083;11132;11236;11288		0.15932	0	1	151020000			29553	7642	14658	14717	33902;33903;33904;33905;33906;33907;33908;33909	33902					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4801513552666	4	334.479649	1333.88949	-0.2731	-9.1347E-05	-1.69	-0.00056527	-1.9631	-0.00065662	334.4804280186109	21.223	1.6253	22.349	21.926	23.551	1.1254					249	50	7	0	0	0	0.89803	4	8796	8796;8850;9281;9332		0.15932	0	1	740700000			29554	7642	14658	14717	33910;33911;33912;33913	33910					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4806091189384	4	334.479649	1333.88949	-0.046462	-1.5541E-05	-1.1518	-0.00038524	-1.1982	-0.00040078	334.48064893038537	22.694	1.8804	23.908	23.609	25.489	1.2145					295	60	7	0	0	0	0.89803	7	9470	9470;9574;9652;9691;9769;9993;10047		0.15932	0	1	642000000			29555	7642	14658	14717	33914;33915;33916;33917;33918;33919;33920	33914					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	445.6363403201103	3	445.637106	1333.88949	1.4186	0.00063216	-2.333	-0.0010397	-0.91448	-0.00040753	445.6358666116111	22.701	0.89031	23.915	23.736	24.627	1.2145					83	28	4	0	0	0	0.89803	1	9615	9615		0.15932	0	1	12979000			29556	7642	14658	14717	33921	33921					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4789001345634	4	334.479649	1333.88949	0.12229	4.0905E-05	-3.0316	-0.001014	-2.9093	-0.0009731	334.4789065153543	24.857	2.539	26.098	25.331	27.871	1.241					289	82	6	0	0	0	0.89803	13	10101	10101;10151;10315;10366;10418;10457;10512;10565;10618;10720;10773;10828;10880		0.15932	0	1	178320000			29557	7642	14658	14717	33922;33923;33924;33925;33926;33927;33928;33929;33930;33931;33932;33933;33934	33922					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4788696169853	4	334.479649	1333.88949	-0.17747	-5.936E-05	-2.1476	-0.00071833	-2.3251	-0.00077769	334.47881461304644	27.266	1.7945	28.538	28.295	30.089	1.2715					119	58	3	0	0	0	0.89803	5	11382	11382;11434;11668;11719;11968		0.15932	0	1	3180900			29558	7642	14658	14717	33935;33936;33937;33938;33939	33935					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.9506713747978	2	667.952021	1333.88949	0.19487	0.00013017	-1.6415	-0.0010964	-1.4466	-0.00096626	667.9508211985054	20.529	0.090981	22.103	22.028	22.119	1.5748					4	2	2	0	0	0	0.89803	1	8546	8546		0	0	1	2425200			29559	7642	14658	14717	33940	33940					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.6363403201103	3	445.637106	1333.88949	0.58837	0.0002622	-2.9554	-0.0013171	-2.3671	-0.0010549	445.6357405566276	20.759	0.86156	22.333	22.028	22.89	1.5748					88	28	4	0	0	0	0.89803	4	8607	8607;8657;8709;8748		0.15932	0	1	56703000			29560	7642	14658	14717	33941;33942;33943;33944	33941					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.9506713747978	2	667.952021	1333.88949	0.20298	0.00013558	-2.8517	-0.0019048	-2.6487	-0.0017692	667.9498745502522	20.759	0.35105	22.333	22.208	22.559	1.5748					28	11	3	0	0	0	0.89803	3	8608	8608;8659;8710		0	0	1	16219000			29561	7642	14658	14717	33945;33946;33947	33945					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4802429080009	4	334.479649	1333.88949	-0.090082	-3.013E-05	-1.8852	-0.00063055	-1.9753	-0.00066068	334.4803209183116	20.821	1.5995	22.395	21.969	23.569	1.5748					258	53	7	0	0	0	0.89803	1	8685	8685		0.15932	0	1	806570000			29562	7642	14658	14717	33948	33948					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4789001345634	4	334.479649	1333.88949	-0.021052	-7.0415E-06	-1.4044	-0.00046976	-1.4255	-0.0004768	334.48055263633654	22.564	1.9819	24.214	23.552	25.533	1.6498					317	64	7	0	0	0	0.89803	6	9213	9213;9340;9475;9722;9874;9917		0.15932	0	1	559120000			29563	7642	14658	14717	33949;33950;33951;33952;33953;33954	33949					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.6363708376884	3	445.637106	1333.88949	0.65191	0.00029052	-2.1592	-0.00096221	-1.5073	-0.00067169	445.6360554384855	22.23	0.49175	23.846	23.674	24.165	1.6158					55	15	4	0	0	0	0.89803	3	9277	9277;9329;9383		0.77653	0.61721	1	22235000			29564	7642	14658	14717	33955;33956;33957	33955					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.9505493044853	2	667.952021	1333.88949	0.2687	0.00017948	-1.722	-0.0011502	-1.4533	-0.0009707	667.9507475740758	22.443	0.21392	24.058	23.89	24.104	1.6158					15	6	3	0	0	0	0.89803	2	9332	9332;9384		0	0	1	1715800			29565	7642	14658	14717	33958;33959	33958					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4801208376884	4	334.479649	1333.88949	0.046622	1.5594E-05	-1.7733	-0.00059313	-1.7267	-0.00057754	334.47954727571795	24.206	0.55521	25.891	25.473	26.028	1.6845					71	17	5	0	0	0	0.89803	2	10123	10123;10162		0.15932	0	1	114810000			29566	7642	14658	14717	33960;33961	33960					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.7284423708916	4	334.479649	1333.88949	0.15925	5.3265E-05	-2.5796	-0.00086283	-2.4204	-0.00080957	334.47872159816603	26.805	1.0178	28.552	28.308	29.326	1.747					92	33	3	0	0	0	0.89803	3	11169	11169;11244;11456		0.15932	0	1	2439000			29567	7642	14658	14717	33962;33963;33964	33962					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4792968630791	4	334.479649	1333.88949	0.19473	6.5135E-05	-2.8501	-0.00095331	-2.6554	-0.00088817	334.4787535709117	28.021	0.88884	29.796	29.233	30.122	1.7754					70	28	3	0	0	0	0.89803	2	11517	11517;11809		0.15932	0	1	2223400			29568	7642	14658	14717	33965;33966	33965					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	667.9506713747978	2	667.952021	1333.88949	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.204	1	25.888	25.388	26.388	1.6845								0	0	0	0.66254	1	10108	10108		0	0	1				29569	7642	14658	14717	33967	33967					0.23590037101371308
RRPRILVRRI	10	Unmodified	_RRPRILVRRI_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|89|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1203491091728	3	445.637106	1333.88949	0.66612	0.00029685	-2.241	-0.00099866	-1.5748	-0.00070181	445.63607730417607	22.647	0.51523	24.299	24.201	24.716	1.6511					56	16	4	0	0	0	0.12561	1	9549	9549		0.15932	0	1	17181000			29570	7642	14658	14717	33968	33968					0.23590037101371308
RRPRKVGVKRV	11	Unmodified	_RRPRKVGVKRV_					0	0	0			REV__nc|ENSG00000149231|Q8N4S0-2|CCDC82	REV__nc|ENSG00000149231|Q8N4S0-2|CCDC82	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.4777404665947	4	338.478378	1349.8844	-2.1016	-0.00071134	0.42006	0.00014218	-1.6815	-0.00056916	338.4783423998433	29.027	0.46165	29.027	28.81	29.272	0					31	14	3	0	0	0	1.039	1	12146	12146		0.45452	0	1	983530	+		29571	10362	14659	14718	33969	33969					0.22345733238717003
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.0991393923759	4	373.993455	1491.94471	-0.66583	-0.00024901	-0.14679	-5.4898E-05	-0.81262	-0.00030391	373.99338865128067	38.255	0.73866	38.255	37.972	38.711	0					61	32	2	0	0	0	0.14606	1	16206	16206		0	0	1	4340300	+		29572	12471	14660	14719	33970	33970					0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1014892458916	4	373.993455	1491.94471	1.2084	0.00045192	-0.8418	-0.00031483	0.36656	0.00013709	373.9930038273313	34.17	1.352	34.467	33.699	35.051	0.29701					126	46	3	0	0	0	0.14606	1	14580	14580		0.08335	0	1	3315000	+		29573	12471	14660	14719	33971	33971					0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2441894412041	4	373.993455	1491.94471	-0.35472	-0.00013266	-0.43444	-0.00016248	-0.78916	-0.00029514	374.2440172511473	33.158	0.99734	34.436	33.584	34.581	1.2782					91	40	3	0	0	0	1.039	2	13748	13748;13848		0.45452	0	1	10726000	+		29574	12471	14660	14719	33972;33973	33972					0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	373.993455	1491.94471	-0.35472	-0.00013266	-0.43444	-0.00016248	-0.78916	-0.00029514	374.2440172511473	33.158	0.99734	34.436	33.584	34.581	1.2782	0.075273	0.00044507	NaN	0.08335	91	40	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10726000	+		29575	12471	14660	14719							0.21841843621791668
RRPSKKRRRRP	11	Unmodified	_RRPSKKRRRRP_					0	0	0			REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	REV__ENST00000337014.10_2_17:80376485-80377700:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	373.993455	1491.94471	0.5411	0.00020237	-0.89137	-0.00033337	-0.35027	-0.000131	373.9930616411784	32.354	1.0177	34.179	33.47	34.488	1.8246	-0.18162	-0.00023849	NaN	0.08335	89	38	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4462100	+		29576	12471	14660	14719							0.21841843621791668
RRQEMRQFFTV	11	Unmodified	_RRQEMRQFFTV_					0	0	0		nc|ENSG00000110693|P35712-4|SOX6;nc|ENSG00000110693|P35712-2|SOX6;nc|ENSG00000110693|P35712-3|SOX6;ENSG00000110693|ENST00000683767|SOX6	nc|ENSG00000110693|P35712-4|SOX6	nc|ENSG00000110693|P35712-4|SOX6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.9306823611259	3	499.929627	1496.76705	-0.073919	-3.6954E-05	2.314	0.0011568	2.2401	0.0011199	499.93077039662694	13.209	0.18905	13.936	13.851	14.04	0.72639					11	5	3	0	0	0	1.0373	1	5492	5492		0.32927	0	1	638160			29577	1711	14661	14720	33974	33974					0.03853787516936791
RRQEWFFLRVY	11	Unmodified	_RRQEWFFLRVY_					0	0	0		ENST00000594682.6_1_19:53122308-53193715:-|nuORF	ENST00000594682.6_1_19:53122308-53193715:-|nuORF	ENST00000594682.6_1_19:53122308-53193715:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	800.7705566287041	2	800.430784	1598.84702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.1	1	43.424	42.924	43.924	0.32389								0	0	0	0.63775	1	18102	18102		0.96228	0	1				29578	7508	14662	14721	33975	33975					0.07154597182466205
RRQGAAPL	8	Unmodified	_RRQGAAPL_					0	0	0			REV__chr8:144530604-144530702|129|12.73|0.33|5.28|-|2|None,ARHGAP39|1	REV__chr8:144530604-144530702|129|12.73|0.33|5.28|-|2|None,ARHGAP39|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7600890994072	2	434.759218	867.503883	1.8739	0.0008147	0.38887	0.00016906	2.2628	0.00098377	434.75929391937945	68.908	0.62457	69.23	68.844	69.469	0.32224					50	19	4	0	0	0	0.89176	2	28873	28873;28913		0.79363	0.79363	1	16388000	+		29579	8345	14663	14722	33976;33977	33976					0.06483159914284897
RRQIHIATF	9	Unmodified	_RRQIHIATF_					0	0	0			REV__nc|ENSG00000197782|O75290-2|ZNF780A	REV__nc|ENSG00000197782|O75290-2|ZNF780A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3323242068291	2	571.333082	1140.65161	2.4905	0.0014229	-3.2494	-0.0018565	-0.7589	-0.00043359	571.3308156708798	88.248	0.36931	88.483	88.322	88.691	0.23471					27	11	3	0	0	0	0.83213	1	36988	36988		2.0598	0	1	3086400	+		29580	14524	14664	14723	33978	33978					0.08691051448272447
RRQKLEKKKK	10	Unmodified	_RRQKLEKKKK_					0	0	0		ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	ENST00000433510.2_1_17:46713640-46724167:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	671.4453613162041	2	671.443695	1340.87284	2.9181	0.0019593	0.27883	0.00018722	3.1969	0.0021466	671.4438429785494	107.28	0.20384	107.44	107.34	107.54	0.15781					39	10	5	0	0	0	0.89803	1	46085	46085		1.3295	0.13619	1	524080000			29581	6513	14665	14724	33979	33979					0.216034914247075
RRQKRERRKRR	11	Unmodified	_RRQKRERRKRR_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	326.0451843142509	5	325.809164	1624.00944	1.0916	0.00035566	-3.5012	-0.0011407	-2.4096	-0.00078506	325.80778377602445	49.766	0.78833	50.097	49.758	50.547	0.33019					43	24	2	0	0	0	0.14606	1	20809	20809		0	0	1	1607000	+		29582	9799	14666	14725	33980	33980					0.22239418427784585
RRQKRERRKRR	11	Unmodified	_RRQKRERRKRR_					0	0	0			REV__ENSG00000130764|ENST00000378251|LRRC47	REV__ENSG00000130764|ENST00000378251|LRRC47	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		5	325.809164	1624.00944	1.6477	0.00053684	-4.1413	-0.0013493	-2.4936	-0.00081245	325.80772966917664	48.062	0.86253	50.039	49.714	50.576	1.9772	-0.028549	-0.00052079	NaN	0	44	27	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1024400	+		29583	9799	14666	14725							0.22239418427784585
RRQKRRLNKLK	11	Unmodified	_RRQKRRLNKLK_					0	0	0			REV__nc|ENSG00000164197|Q86T96-2|RNF180	REV__nc|ENSG00000164197|Q86T96-2|RNF180	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1011840701103	4	374.749659	1494.96953	-0.32584	-0.00012211	0.26677	9.9972E-05	-0.059072	-2.2137E-05	374.749612048252	46.555	0.61796	46.555	45.978	46.596	0					27	19	2	0	0	0	0.14606	1	19236	19236		0	0	1	518740	+		29584	10725	14667	14726	33981	33981					0.24184478704546564
RRQLLIPLRD	10	Unmodified	_RRQLLIPLRD_					0	0	0			REV__ENSG00000137877|ENST00000320955|SPTBN5	REV__ENSG00000137877|ENST00000320955|SPTBN5	MSMS	GG20161007_CRH_Patient100_A02_01	1	640.4028808474541	2	640.401496	1278.78844	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.29	1	102.29	101.79	102.79	0								0	0	0	0.66176	1	42856	42856		1.4819	0	1		+		29585	10035	14668	14727	33982	33982					0.16019540607976523
RRQLYLTT	8	Unmodified	_RRQLYLTT_					0	0	0		ENSG00000268655|ENST00000637680|unknown	ENSG00000268655|ENST00000637680|unknown	ENSG00000268655|ENST00000637680|unknown	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.8057128787041	2	525.806365	1049.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.62	103.12	104.12	0.16445								0	0	0	1.0178	1	43616	43616		0.79363	0	1				29586	5441	14669	14728	33983	33983					0.07536253945727367
RRQNLYIWRFR	11	Unmodified	_RRQNLYIWRFR_					0	0	0		ENST00000521082.5_1_7:23205510-23207476:+|nuORF	ENST00000521082.5_1_7:23205510-23207476:+|nuORF	ENST00000521082.5_1_7:23205510-23207476:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1802245974541	4	402.731201	1606.8957	-0.056753	-2.2856E-05	0.22446	9.0397E-05	0.16771	6.754E-05	402.7306464634906	11.48	0.094259	12.241	12.193	12.288	0.76165					4	2	2	0	0	0	0.14606	1	4769	4769		0.45452	0.37117	1	290340			29587	7080	14670	14729	33984	33984					0.11652510542171512
RRQPLRLPLC	10	Unmodified	_RRQPLRLPLC_					0	0	0		ENST00000370267.1_1_1:93811500-93811891:+|nuORF;ENST00000370272.8_1_1:93811500-93811869:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6923705935478	4	313.692121	1250.73938	-0.29721	-9.3233E-05	1.9046	0.00059745	1.6073	0.00050421	313.69266729433843	28.894	0.54902	30.177	29.794	30.343	1.2825					68	17	5	0	0	0	0.89803	1	12015	12015		0.69767	0.24315	1	30056000			29588	6110	14671	14730	33985	33985					0.1240392904737746
RRQPLRLPLC	10	Unmodified	_RRQPLRLPLC_					0	0	0		ENST00000370267.1_1_1:93811500-93811891:+|nuORF;ENST00000370272.8_1_1:93811500-93811869:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9217101931572	3	417.920403	1250.73938	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.883	1	31.165	30.665	31.665	1.2825								0	0	0	0.66166	1	12540	12540		0.69767	0	1				29589	6110	14671	14730	33986	33986					0.1240392904737746
RRQPLRLPLC	10	Unmodified	_RRQPLRLPLC_					0	0	0		ENST00000370267.1_1_1:93811500-93811891:+|nuORF;ENST00000370272.8_1_1:93811500-93811869:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6929199099541	4	313.692121	1250.73938	0.061516	1.9297E-05	1.2054	0.00037813	1.2669	0.00039743	313.69242795483547	28.302	0.51793	30.077	29.665	30.183	1.7754					62	16	4	0	0	0	0.88022	2	11712	11712;11865		1.7423	1.2878	1	33547000			29590	6110	14671	14730	33987;33988	33987					0.1240392904737746
RRQPLRLPLC	10	Unmodified	_RRQPLRLPLC_					0	0	0		ENST00000370267.1_1_1:93811500-93811891:+|nuORF;ENST00000370272.8_1_1:93811500-93811869:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	ENST00000370267.1_1_1:93811500-93811891:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6924621462822	4	313.692121	1250.73938	0.084014	2.6354E-05	0.8978	0.00028163	0.98181	0.00030799	313.6923345218594	28.733	0.81334	30.532	30.206	31.02	1.7987					89	26	5	0	0	0	0.88022	2	12063	11919;12063		1.7423	0.52744	1	20859000			29591	6110	14671	14730	33989;33990	33990					0.1240392904737746
RRQRPRALW	9	Unmodified	_RRQRPRALW_					0	0	0		ENST00000525715.5_1_11:1244357-1247464:+|nuORF	ENST00000525715.5_1_11:1244357-1247464:+|nuORF	ENST00000525715.5_1_11:1244357-1247464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8704711794853	2	619.870697	1237.72684	1.4221	0.00088151	-1.2201	-0.00075633	0.20194	0.00012518	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	0.80869	1	32482	32482		5.2307	1.2863	1	7012900			29592	7119	14672	14731	33991	33991					0.11748653699351053
RRQRRRRQ	8	Unmodified	_RRQRRRRQ_					0	0	0		ENST00000394967.2_1_2:175202164-175202371:+|nuORF	REV__ENST00000394967.2_1_2:175202164-175202371:+|nuORF	REV__ENST00000394967.2_1_2:175202164-175202371:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5369750857353	4	303.690873	1210.73439	0.3672	0.00011151	1.6299	0.00049498	1.9971	0.00060649	303.6914776943611	28.811	0.30358	29.091	28.925	29.229	0.2793					12	9	2	0	0	0	2.3239	1	12076	12076		1.6526	0	1	437030			29593	6285	14673	14732	33992	33992					0.13744806019644784
RRRAARLR	8	Unmodified	_RRRAARLR_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF;REV__ENST00000340622.7_1_7:149191544-149194826:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	352.2317993044853	3	352.23208	1053.67441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.259	1	87.386	86.886	87.886	1.1265								0	0	0	1.0178	1	36325	36325		0.40072	0	1				29594	6280;12491	14674	14733	33993	33993					0.14972115356385984
RRRAARLRP	9	Unmodified	_RRRAARLRP_					0	0	0		ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	ENST00000394236.7_1_3:93692655-93692814:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	384.5824767947197	3	384.583002	1150.72718	-0.94054	-0.00036171	-0.23344	-8.9776E-05	-1.174	-0.00045149	384.58277374118836	24.629	0.79909	24.629	24.273	25.072	0					63	25	5	0	0	0	0.83213	1	10276	10276		1.0715	0	1	24145000			29595	6280	14675	14734	33994	33994					0.1578407341919501
RRRALKKRDRE	11	Unmodified	_RRRALKKRDRE_					0	0	0			REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	743.4580566287041	2	742.455656	1482.89676	2.7854	0.002068	2.4162	0.0017939	5.2015	0.0038619	743.4586206011927	87.052	0.68748	87.052	86.67	87.357	0					122	28	5	0	0	0	1.0366	1	36227	36227		1.1933	0.79263	1	20777000	+		29596	9864	14676	14735	33995	33995					0.17462724911069927
RRRALKKRDRE	11	Unmodified	_RRRALKKRDRE_					0	0	0			REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	743.4589721560478	2	742.455656	1482.89676	2.5565	0.0018981	2.6529	0.0019697	5.2094	0.0038677	743.4587821088772	86.809	0.72151	87.053	86.69	87.412	0.24387					115	29	5	0	0	0	1.0366	1	36495	36495		1.1933	0.88631	1	20239000	+		29597	9864	14676	14735	33996	33996					0.17462724911069927
RRRALKKRDRE	11	Unmodified	_RRRALKKRDRE_					0	0	0			REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	742.455656	1482.89676	2.7854	0.002068	2.4162	0.0017939	5.2015	0.0038619	743.4586206011927	87.052	0.68748	87.052	86.67	87.357	0	0.10587	-0.00053741	NaN	1.1933	122	28	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20777000	+		29598	9864	14676	14735							0.17462724911069927
RRRALKKRDRE	11	Unmodified	_RRRALKKRDRE_					0	0	0			REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	REV__ENST00000519313.5_1_5:150110976-150138143:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	742.455656	1482.89676	2.5565	0.0018981	2.6529	0.0019697	5.2094	0.0038677	743.4587821088772	86.809	0.72151	87.053	86.69	87.412	0.24387	0.10687	-0.00018589	NaN	1.1933	115	29	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20239000	+		29599	9864	14676	14735							0.17462724911069927
RRRALTELY	9	Unmodified	_RRRALTELY_					0	0	0		ABCA3|p.T1344A|1|0.35|ENSG00000167972|chr16:2283191-2283191|T/C|missense_variant	ABCA3|p.T1344A|1|0.35|ENSG00000167972|chr16:2283191-2283191|T/C|missense_variant	ABCA3|p.T1344A|1|0.35|ENSG00000167972|chr16:2283191-2283191|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3433715701103	2	589.343646	1176.67274	1.9498	0.0011491	-0.65915	-0.00038846	1.2907	0.00076065	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	0.84963	1	32399	32399		0.6015	0	1	8239500			29600	4	14677	14736	33997	33997					0.09147016757128767
RRRARFRKL	9	Unmodified	_RRRARFRKL_					0	0	0			REV__ENST00000237612.7_1_4:89079727-89080063:-|nuORF	REV__ENST00000237612.7_1_4:89079727-89080063:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2740356326103	3	420.274168	1257.80067	2.936	0.0012339	-2.8942	-0.0012164	0.041726	1.7537E-05	420.2733707292667	92.378	0.46343	92.546	92.281	92.744	0.16835					45	14	4	0	0	0	0.8523	1	38687	38687		0.23584	0.076522	1	11168000	+		29601	12115	14678	14737	33998	33998					0.1820862186168597
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.6939880251884	4	303.694353	1210.7483	-3.0267	-0.0009192	1.7345	0.00052677	-1.2922	-0.00039243	303.69482115054495	23.516	0.66967	23.516	23.169	23.839	0					65	21	4	0	0	0	0.81521	1	9838	9838		2.7352	0	1	3195900			29602	5675	14679	14738	33999	33999					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.6932250857353	4	303.694353	1210.7483	-2.8882	-0.00087712	-0.13823	-4.1979E-05	-3.0264	-0.0009191	303.69440317953496	26.74	1.5721	26.74	25.748	27.321	0					119	51	3	0	0	0	0.77025	2	11243	11047;11243		4.5289	0	1	5068100			29603	5675	14679	14738	34000;34001	34001					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.6937133669853	4	303.694353	1210.7483	0.067635	2.054E-05	-1.8203	-0.00055282	-1.7527	-0.00053228	303.69376898531993	23.315	0.7179	23.548	23.096	23.814	0.23306					78	22	4	0	0	0	0.81521	1	9632	9632		2.7352	0	1	2433400			29604	5675	14679	14738	34002	34002					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5367004275322	4	303.694353	1210.7483	0.097902	2.9732E-05	-1.489	-0.00045221	-1.3911	-0.00042248	303.6938099286297	23.878	0.65062	24.12	23.793	24.444	0.24251					39	20	2	0	0	0	0.11901	1	9975	9975		2.7352	0	1	3035700			29605	5675	14679	14738	34003	34003					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6937438845634	4	303.694353	1210.7483	-0.15018	-4.5609E-05	-1.6767	-0.00050919	-1.8268	-0.0005548	303.69385378663884	22.084	0.67509	23.26	22.96	23.635	1.177					70	21	4	0	0	0	0.81521	1	9238	9238		2.7352	0	1	5589500			29606	5675	14679	14738	34004	34004					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.6938964724541	4	303.694353	1210.7483	0.11758	3.571E-05	-2.0858	-0.00063343	-1.9682	-0.00059772	303.69368568503904	24.255	0.74282	25.496	24.928	25.67	1.241					83	23	4	0	0	0	0.81521	2	10102	10049;10102		2.7352	0	1	3548200			29607	5675	14679	14738	34005;34006	34006					0.15136038728041967
RRRDALRLR	9	Unmodified	_RRRDALRLR_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5364257693291	4	303.694353	1210.7483	-0.084504	-2.5663E-05	-1.4881	-0.00045192	-1.5726	-0.00047758	303.6938641817456	22.618	0.58895	23.833	23.609	24.198	1.2145					48	18	4	0	0	0	0.11916	1	9472	9472		2.2828	0	1	4147800			29608	5675	14679	14738	34007	34007					0.15136038728041967
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3572875857353	2	584.355745	1166.69694	1.9193	0.0011216	1.1597	0.00067768	3.079	0.0017992	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.89178	4	31144	31144;31409;31563;31642		0.69038	0	1	6168700			29609	7421	14680	14739	34008;34009;34010;34011	34008					0.12025714754008732
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3588744997978	2	584.355745	1166.69694	1.8949	0.0011073	0.38378	0.00022427	2.2787	0.0013316	584.3564719040249	76.338	0.93048	76.338	76.164	77.095	0					49	29	3	0	0	0	0.89178	2	31834	31834;31902		0.69038	0	1	2118400			29610	7421	14680	14739	34012;34013	34012					0.12025714754008732
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3564330935478	2	584.355745	1166.69694	1.8497	0.0010809	1.644	0.00096067	3.4937	0.0020416	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	0.89178	1	30387	30387		0.69038	0	1	3000400			29611	7421	14680	14739	34014	34014					0.12025714754008732
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3572875857353	2	584.355745	1166.69694	2.4547	0.0014344	1.0644	0.00062197	3.5191	0.0020564	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89178	2	31137	31137;31569		0.69038	0	1	7390500			29612	7421	14680	14739	34015;34016	34015					0.12025714754008732
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3580200076103	2	584.355745	1166.69694	2.1623	0.0012636	0.58765	0.0003434	2.75	0.001607	584.3561690421724	76.208	1.0234	76.529	76.209	77.232	0.32163					53	32	3	0	0	0	0.89178	1	31827	31827		0.69038	0	1	3221500			29613	7421	14680	14739	34017	34017					0.12025714754008732
RRRDPRRR	8	Unmodified	_RRRDPRRR_					0	0	0		nc|ENSG00000251359|Q96NR7|WWC2-AS2;ENST00000578387.1_1_4:184019140-184020019:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	REV__ENST00000326786.4_1_1:157106146-157108174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3584472537041	2	584.355745	1166.69694	2.513	0.0014685	1.9829	0.0011587	4.4959	0.0026272	584.3569529036686	89.664	0.41656	89.888	89.647	90.063	0.22359					31	12	3	0	0	0	0.89178	1	37545	37545		0.69038	0	1	2973600			29614	7421	14680	14739	34018	34018					0.12025714754008732
RRREIHEHKLR	11	Unmodified	_RRREIHEHKLR_					0	0	0			REV__ARHGAP35|p.N1348Tfs*14|1|0.33|ENSG00000160007|chr19:46999308-46999308|C/-|frameshift_variant	REV__ARHGAP35|p.N1348Tfs*14|1|0.33|ENSG00000160007|chr19:46999308-46999308|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.6364013552666	3	510.634313	1528.88111	2.2751	0.0011617	0.0041958	2.1425E-06	2.2793	0.0011639	510.6345053766552	92.3	1.0819	92.3	91.662	92.744	0					87	34	3	0	0	0	1.0405	2	38385	38385;38437		0	0	1	1468600	+		29615	8138	14681	14740	34019;34020	34019					0.13782438394059682
RRREKPRRRER	11	Unmodified	_RRREKPRRRER_					0	0	0			REV__ENSG00000077157|ENST00000608999|PPP1R12B	REV__ENSG00000077157|ENST00000608999|PPP1R12B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.0926696658134	5	319.797527	1593.95125	-2.5122	-0.00080341	-3.2471	-0.0010384	-5.7593	-0.0018418	319.7962359591431	33.77	0.58483	33.77	33.484	34.069	0					27	18	2	0	0	0	0.14606	1	14074	14074		0	0	1	783670	+		29616	8777	14682	14741	34021	34021					0.17803736782525448
RRRFQKTKNLL	11	Unmodified	_RRRFQKTKNLL_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1;ENST00000587537.5_1_19:45480680-45489871:+|nuORF	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	487.3761169314384	3	487.303793	1458.88955	1.4613	0.00071209	0.065397	3.1868E-05	1.5267	0.00074396	487.305091607046	97.017	0.24249	97.017	96.894	97.136	0					9	7	2	0	0	0	0.14606	1	40555	40555		0.094841	0	1	654910			29617	1481	14683	14742	34022	34022					0.17845992310708425
RRRGERKRK	9	Unmodified	_RRRGERKRK_					0	0	0		ENST00000222747.7_1_7:120497939-120498116:-|nuORF	ENST00000222747.7_1_7:120497939-120498116:-|nuORF	ENST00000222747.7_1_7:120497939-120498116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	621.3943359255791	2	621.392328	1240.7701	2.3374	0.0014524	-0.85122	-0.00052894	1.4862	0.00092348	621.3917814315166	92.458	0.54696	92.458	92.197	92.744	0					63	17	5	0	0	0	0.85019	1	38567	38567		0.52476	0	1	34248000			29618	5534	14684	14743	34023	34023					0.15934843476634342
RRRGGWAL	8	Unmodified	_RRRGGWAL_					0	0	0		ENST00000495071.6_1_13:37633718-37633817:-|nuORF	ENST00000495071.6_1_13:37633718-37633817:-|nuORF	ENST00000495071.6_1_13:37633718-37633817:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2878295779228	2	486.285934	970.557316	3.3649	0.0016363	-0.97869	-0.00047593	2.3862	0.0011604	486.28539856691623	89.408	0.41567	89.631	89.36	89.775	0.22359					22	12	2	0	0	0	0.89176	1	37489	37489		0.79363	0	1	2513900			29619	6942	14685	14744	34024	34024					0.07085957416791189
RRRGKAVLK	9	Unmodified	_RRRGKAVLK_					0	0	0			REV__ENST00000507004.1_1_5:43299045-43313551:-|nuORF	REV__ENST00000507004.1_1_5:43299045-43313551:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1083.719653308392	1	1083.72216	1082.71488	1.1298	0.0012244	-3.462	-0.0037519	-2.3322	-0.0025274	1083.7188771231888	24.916	0.70205	24.916	24.461	25.163	0					34	22	2	0	0	0	0.7849	1	10323	10323		3.9444	0.66309	1	443270	+		29620	12424	14686	14745	34025	34025					0.17683036956168507
RRRGKAVLK	9	Unmodified	_RRRGKAVLK_					0	0	0			REV__ENST00000507004.1_1_5:43299045-43313551:-|nuORF	REV__ENST00000507004.1_1_5:43299045-43313551:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1083.72216	1082.71488	1.1298	0.0012244	-3.462	-0.0037519	-2.3322	-0.0025274	1083.7188771231888	24.916	0.70205	24.916	24.461	25.163	0	0	0	NaN	3.9444	34	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443270	+		29621	12424	14686	14745							0.17683036956168507
RRRHLARG	8	Unmodified	_RRRHLARG_					0	0	0			REV__ENST00000368061.2_1_1:160388904-160390242:+|nuORF	REV__ENST00000368061.2_1_1:160388904-160390242:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1021.627490222454	1	1021.62384	1020.61656	3.3319	0.0034039	0.47214	0.00048235	3.804	0.0038863	1021.6237424436702	107.57	0.20622	107.73	107.62	107.83	0.15795					29	10	4	0	0	0	0.89198	1	46240	46240		0	0	1	302790000	+		29622	12633	14687	14746	34026	34026					0.10707853430983505
RRRHLFPK	8	Unmodified	_RRRHLFPK_					0	0	0			REV__KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	REV__KAT6A|p.F1751Lfs*32|1|0.04|ENSG00000083168|chr8:41932967-41932968|-/CATAGGCTGCTGGGTATAGGCCTGGCTCCCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1109.681689441204	1	1109.68029	1108.67301	1.3387	0.0014855	0.079559	8.8285E-05	1.4183	0.0015738	1109.6804515713159	107.57	0.15646	107.57	107.49	107.65	0					18	7	3	0	0	0	0.89198	1	46150	46150		0	0	1	28034000	+		29623	8827	14688	14747	34027	34027					0.12302481267647636
RRRHLLLAP	9	Unmodified	_RRRHLLLAP_					0	0	0			REV__ENSG00000171161|ENST00000306562|ZNF672	REV__ENSG00000171161|ENST00000306562|ZNF672	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3666869997978	2	566.364716	1130.71488	3.2067	0.0018161	0.56901	0.00032227	3.7757	0.0021384	566.3650484975075	107.48	0.22772	107.63	107.51	107.73	0.15781					53	11	7	0	0	0	0.85403	1	46264	46264		0	0	1	931010000	+		29624	11013	14689	14748	34028	34028					0.15475036956195254
RRRHLLLAP	9	Unmodified	_RRRHLLLAP_					0	0	0			REV__ENSG00000171161|ENST00000306562|ZNF672	REV__ENSG00000171161|ENST00000306562|ZNF672	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3675414919853	2	566.364716	1130.71488	3.2597	0.0018462	0.2439	0.00013813	3.5035	0.0019843	566.3648320328563	107.43	0.21425	107.59	107.5	107.72	0.15795					46	10	6	0	0	0	0.85403	2	46136	46136;46199		0	0	1	488240000	+		29625	11013	14689	14748	34029;34030	34029					0.15475036956195254
RRRHLLLAP	9	Unmodified	_RRRHLLLAP_					0	0	0			REV__ENSG00000171161|ENST00000306562|ZNF672	REV__ENSG00000171161|ENST00000306562|ZNF672	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	566.364716	1130.71488	3.2067	0.0018161	0.56901	0.00032227	3.7757	0.0021384	566.3650484975075	107.48	0.22772	107.63	107.51	107.73	0.15781	0.020234	0.00012799	NaN	0	53	11	7	NaN	NaN	NaN	NaN	0				NaN	NaN	0	931010000	+		29626	11013	14689	14748							0.15475036956195254
RRRHLLLAP	9	Unmodified	_RRRHLLLAP_					0	0	0			REV__ENSG00000171161|ENST00000306562|ZNF672	REV__ENSG00000171161|ENST00000306562|ZNF672	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	566.364716	1130.71488	3.2597	0.0018462	0.2439	0.00013813	3.5035	0.0019843	566.3648320328563	107.43	0.21425	107.59	107.5	107.72	0.15795	-0.020234	-0.00024028	NaN	0	46	10	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	488240000	+		29627	11013	14689	14748							0.15475036956195254
RRRHQHDKRKR	11	Unmodified	_RRRHQHDKRKR_					0	0	0			REV__PHIP|p.P1305H|1|0.06|ENSG00000146247|chr6:78954953-78954953|G/T|missense_variant	REV__PHIP|p.P1305H|1|0.06|ENSG00000146247|chr6:78954953-78954953|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	524.9761230349541	3	524.977073	1571.90939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.44	1	23.673	23.173	24.173	0.23306								0	0	0	0.63775	1	9775	9775		0.40827	0.32491	1		+		29628	14596	14690	14749	34031	34031					0.1463118109397783
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1204711794853	3	445.637106	1333.88949	0.72573	0.00032341	-1.5289	-0.00068133	-0.80317	-0.00035792	445.6364015220382	22.913	0.53817	22.913	22.722	23.26	0					63	17	4	0	0	0	0.1256	1	9564	9564		0	0	1	10381000	+		29629	10056	14691	14750	34032	34032					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1205016970634	3	445.637106	1333.88949	0.89293	0.00039792	-1.6796	-0.00074848	-0.78664	-0.00035055	445.63617304231605	26.689	0.99393	26.689	26.237	27.231	0					109	32	4	0	0	0	0.12557	1	11362	11362		0.62683	0.54348	1	3901000	+		29630	10056	14691	14750	34033	34033					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1204406619072	3	445.637106	1333.88949	0.86535	0.00038563	-1.6931	-0.00075451	-0.82776	-0.00036888	445.6361584897195	26.188	0.45352	26.188	25.871	26.325	0					45	14	4	0	0	0	0.1256	1	10932	10932		0	0	1	3992700	+		29631	10056	14691	14750	34034	34034					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1208373904228	3	445.637106	1333.88949	0.93056	0.00041469	-1.5066	-0.0006714	-0.57604	-0.00025671	445.63633035929746	27.446	0.65808	27.446	27.231	27.889	0					76	21	4	0	0	0	0.1256	1	11545	11545		0.13989	0.056541	1	4877000	+		29632	10056	14691	14750	34035	34035					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	444.8443176150322	3	445.637106	1333.88949	0.84085	0.00037471	-1.3731	-0.00061191	-0.53227	-0.0002372	445.6363532891809	25.433	0.71039	25.433	25.223	25.934	0					72	22	4	0	0	0	0.12557	1	10692	10692		1.7423	0.41263	1	4070000	+		29633	10056	14691	14750	34036	34036					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1204711794853	3	445.637106	1333.88949	0.81051	0.00036119	-1.4922	-0.00066498	-0.68169	-0.00030379	445.636280648302	24.737	1.0752	24.737	24.335	25.41	0					107	34	4	0	0	0	0.1256	1	10237	10237		0	0	1	6252600	+		29634	10056	14691	14750	34037	34037					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	667.9510375857353	2	667.952021	1333.88949	0.73287	0.00048952	-2.0757	-0.0013865	-1.3428	-0.00089695	667.9507296721135	24.16	0.73144	24.402	24.073	24.804	0.24251					60	23	3	0	0	0	0.89803	1	10086	10086		0.40072	0.093686	1	1751200	+		29635	10056	14691	14750	34038	34038					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1204711794853	3	445.637106	1333.88949	1.4135	0.00062993	-2.9362	-0.0013085	-1.5226	-0.00067854	445.63567351046964	25.932	0.96642	26.184	25.889	26.856	0.25197					78	31	3	0	0	0	0.1256	1	10858	10858		0.13989	0.056541	1	3716100	+		29636	10056	14691	14750	34039	34039					0.2359003710134857
RRRIPKPRKK	10	Unmodified	_RRRIPKPRKK_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	444.8439208865166	3	445.637106	1333.88949	1.5943	0.00071048	-3.0007	-0.0013372	-1.4064	-0.00062674	445.6353526231132	24.795	0.9304	26.036	25.578	26.508	1.241					68	30	3	0	0	0	0.12557	1	10330	10330		1.7423	0.41263	1	3594600	+		29637	10056	14691	14750	34040	34040					0.2359003710134857
RRRIQRRGP	9	Unmodified	_RRRIQRRGP_					0	0	0		ENSG00000174444|ENST00000307961|RPL4;RPL4-KIAA0317|1|fusion;ENST00000566039.5_1_15:66793707-66797161:-|nuORF	ENSG00000174444|ENST00000307961|RPL4	ENSG00000174444|ENST00000307961|RPL4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8748657107353	2	597.873771	1193.73299	1.7938	0.0010725	1.2865	0.00076915	3.0802	0.0018416	597.8741468502026	97.522	0.12292	97.522	97.446	97.569	0					6	3	2	0	0	0	0.85019	1	40783	40783		0.52476	0	1	2048100			29638	4331	14692	14751	34041	34041					0.14387171930889053
RRRKAARAR	9	Unmodified	_RRRKAARAR_					0	0	0		ENST00000420069.3_3_11:67195969-67200219:+|nuORF	ENST00000420069.3_3_11:67195969-67200219:+|nuORF	ENST00000420069.3_3_11:67195969-67200219:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.9144775271416	3	380.914751	1139.72242	2.3124	0.00088083	-1.4833	-0.000565	0.82916	0.00031584	380.9139706260273	57.569	1.7339	57.892	57.565	59.299	0.32298					68	56	2	0	0	0	0.847	1	24087	24087		0.96228	0.69326	1	2191500			29639	6442	14693	14752	34042	34042					0.15815189276440833
RRRKALFR	8	Unmodified	_RRRKALFR_					0	0	0		INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	368.2432433962822	3	368.240464	1101.69956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.15	1	105.21	104.71	105.71	0.056801								0	0	0	1.0178	1	44518	44518		0.40072	0	1				29640	7659	14694	14753	34043	34043					0.15278170158990179
RRRKALFR	8	Unmodified	_RRRKALFR_					0	0	0		INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2423583865166	3	368.240464	1101.69956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.1	1	105.26	104.76	105.76	0.15859								0	0	0	1.0178	1	44688	44688		0.40072	0	1				29641	7659	14694	14753	34044	34044					0.15278170158990179
RRRKALFR	8	Unmodified	_RRRKALFR_					0	0	0		INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	INVS|p.E911A|1|0.34|ENSG00000119509|chr9:100292989-100292989|A/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	368.2427245974541	3	368.240464	1101.69956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.06	1	105.23	104.73	105.73	0.16679								0	0	0	1.0178	1	44604	44604		0.40072	0	1				29642	7659	14694	14753	34045	34045					0.15278170158990179
RRRKAPLP	8	Unmodified	_RRRKAPLP_					0	0	0		ENST00000298355.7_1_14:51562262-51562502:-|nuORF	ENST00000298355.7_1_14:51562262-51562502:-|nuORF	ENST00000298355.7_1_14:51562262-51562502:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	331.2252685427666	3	331.885799	992.635566	0.035754	1.1866E-05	-3.1975	-0.0010612	-3.1618	-0.0010493	331.8845351846152	24.359	0.12224	26.043	25.967	26.089	1.6845					5	3	2	0	0	0	2.3239	1	10173	10173		0.40072	0	1	139760			29643	5742	14695	14754	34046	34046					0.13895390002028307
RRRKAPLP	8	Unmodified	_RRRKAPLP_					0	0	0		ENST00000298355.7_1_14:51562262-51562502:-|nuORF	ENST00000298355.7_1_14:51562262-51562502:-|nuORF	ENST00000298355.7_1_14:51562262-51562502:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	331.885799	992.635566	0.32573	0.00010811	-2.4457	-0.00081169	-2.12	-0.00070358	331.88438881172044	25.945	0.18213	26.197	26.103	26.285	0.25197	0.076921	0.00055409	NaN	0.40072	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	240640			29644	5742	14695	14754							0.13895390002028307
RRRKKLILAKK	11	Unmodified	_RRRKKLILAKK_					0	0	0		ENSG00000257315|ENST00000550078|ZBED6	ENSG00000257315|ENST00000550078|ZBED6	ENSG00000257315|ENST00000550078|ZBED6	MSMS	GG20161007_CRH_Patient100_W632_02	4	705.6073486208916	2	705.498804	1408.98306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.32	1	101.51	101.01	102.01	0.19076								0	0	0	0.63775	1	42601	42601		0	0	1				29645	5409	14696	14755	34047	34047					0.294923364837814
RRRKMRRREQL	11	Unmodified	_RRRKMRRREQL_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2438232302666	4	396.991755	1583.93791	-0.84193	-0.00033424	2.7662	0.0010982	1.9243	0.00076392	397.24401155310886	11.359	0.15763	12.029	11.95	12.107	0.66934					9	4	3	0	0	0	1.0402	1	4727	4727		0.08335	0.010087	1	1651300	+		29646	12172	14697	14756	34048	34048					0.1693016267895473
RRRKMRRREQL	11	Unmodified	_RRRKMRRREQL_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2427856326103	4	396.991755	1583.93791	-0.10108	-4.0128E-05	1.0074	0.00039993	0.90631	0.0003598	397.2428339329507	11.259	0.12716	12.021	11.941	12.068	0.76165					7	3	3	0	0	0	1.0402	1	4684	4684		0.08335	0	1	1621500	+		29647	12172	14697	14756	34049	34049					0.1693016267895473
RRRKMRRREQL	11	Unmodified	_RRRKMRRREQL_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	396.991755	1583.93791	-0.84193	-0.00033424	2.7662	0.0010982	1.9243	0.00076392	397.24401155310886	11.359	0.15763	12.029	11.95	12.107	0.66934	0.0039463	0.0019198	NaN	0.08335	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1651300	+		29648	12172	14697	14756							0.1693016267895473
RRRKMRRREQL	11	Unmodified	_RRRKMRRREQL_					0	0	0			REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	REV__ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	396.991755	1583.93791	-0.10108	-4.0128E-05	1.0074	0.00039993	0.90631	0.0003598	397.2428339329507	11.259	0.12716	12.021	11.941	12.068	0.76165	-0.0039463	-0.00087309	NaN	0.08335	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1621500	+		29649	12172	14697	14756							0.1693016267895473
RRRKQVKRLKR	11	Unmodified	_RRRKQVKRLKR_					0	0	0		ENSG00000164736|ENST00000297316|SOX17	ENSG00000164736|ENST00000297316|SOX17	ENSG00000164736|ENST00000297316|SOX17	MSMS	GG20161007_CRH_Patient100_W632_01	3	762.5153076052666	2	762.513309	1523.01206	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.25	1	101.42	100.92	101.92	0.17032								0	0	0	0.63775	1	42606	42606		0	0	1				29650	3795	14698	14757	34050	34050					0.2714787383276871
RRRKRFKVLKS	11	Unmodified	_RRRKRFKVLKS_					0	0	0		ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	ENSG00000171956|ENST00000396057|FOXB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	737.4861328005791	2	737.483686	1472.95282	1.3733	0.0010128	0.62728	0.00046261	2.0006	0.0014754	737.4840420841856	105.85	0.1339	105.85	105.76	105.89	0					17	6	4	0	0	0	1.0405	1	45020	45020		0	0	1	29933000			29651	4222	14699	14758	34051	34051					0.23525977818576393
RRRKRLLPRDL	11	Unmodified	_RRRKRLLPRDL_					0	0	0			REV__ENSG00000119638|ENST00000238616|NEK9	REV__ENSG00000119638|ENST00000238616|NEK9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1013061404228	4	370.493022	1477.94298	0.41194	0.00015262	0.6571	0.00024345	1.069	0.00039607	370.49322543441247	24.71	0.11899	25.951	25.852	25.971	1.241					5	3	2	0	0	0	0.14606	1	10317	10317		0	0	1	1060100	+		29652	9548	14700	14759	34052	34052					0.22312789813213385
RRRLARRARRL	11	Unmodified	_RRRLARRARRL_					0	0	0			REV__chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	REV__chr8:27774607-27775499|376|10.46|0.59|4.15|+|1|ESCO2,ESCO2|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	740.4803954958916	2	740.487625	1478.9607	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.85	104.35	105.35	0.1731								0	0	0	0.63775	1	44346	44346		0	0	1		+		29653	8346	14701	14760	34053	34053					0.24037549858712737
RRRLCPRA	8	Unmodified	_RRRLCPRA_					0	0	0		ENST00000542616.1_1_11:113345116-113345971:-|nuORF;ENST00000362072.7_1_11:113295347-113345971:-|nuORF	ENST00000542616.1_1_11:113345116-113345971:-|nuORF	ENST00000542616.1_1_11:113345116-113345971:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2079040408134	3	343.206655	1026.59813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.89	1	102.95	102.45	103.45	0.062805								0	0	0	1.0178	1	43113	43113		0.40072	0	1				29654	6046	14702	14761	34054	34054					0.0858997546476985
RRRLGKMG	8	Unmodified	_RRRLGKMG_					0	0	0			REV__ENST00000320743.7_2_12:59314161-59314203:-|nuORF	REV__ENST00000320743.7_2_12:59314161-59314203:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	325.2010681033134	3	325.199389	972.576337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.31	1	103.47	102.97	103.97	0.16445								0	0	0	1.0178	1	43532	43532		0.45834	0	1		+		29655	12402	14703	14762	34055	34055					0.08895170716220946
RRRLLATA	8	Unmodified	_RRRLLATA_					0	0	0		ENST00000575478.5_2_17:19263690-19266015:-|nuORF;ENST00000261499.8_2_17:19265865-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	956.6169921755791	1	956.611208	955.603932	2.3889	0.0022852	3.6757	0.0035162	6.0646	0.0058015	956.614648608871	109.12	0.24203	109.28	109.13	109.37	0.15898					36	11	4	0	0	0	0.89178	1	47348	47348		0.69038	0	1	107690000			29656	5626	14704	14763	34056	34056					0.12435397248088975
RRRLLATA	8	Unmodified	_RRRLLATA_					0	0	0		ENST00000575478.5_2_17:19263690-19266015:-|nuORF;ENST00000261499.8_2_17:19265865-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	956.6158935427666	1	956.611208	955.603932	3.3983	0.0032509	2.16	0.0020663	5.5584	0.0053172	956.6130853715651	109.08	0.26518	109.24	109.1	109.36	0.1548					36	12	4	0	0	0	0.89178	1	47194	47194		0.69038	0	1	71915000			29657	5626	14704	14763	34057	34057					0.12435397248088975
RRRLLATA	8	Unmodified	_RRRLLATA_					0	0	0		ENST00000575478.5_2_17:19263690-19266015:-|nuORF;ENST00000261499.8_2_17:19265865-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	ENST00000575478.5_2_17:19263690-19266015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.8126708865166	2	478.809242	955.603932	3.2308	0.0015469	2.0119	0.00096332	5.2427	0.0025102	478.81068632246263	109.09	0.26518	109.24	109.1	109.36	0.1548					30	12	3	0	0	0	0.89178	1	47216	47216		0.69038	0	1	41610000			29658	5626	14704	14763	34058	34058					0.12435397248088975
RRRLLIKKM	9	Unmodified	_RRRLLIKKM_					0	0	0		ENSG00000124302|ENST00000650847|CHST8;EPT1-CHST8|1|fusion	ENSG00000124302|ENST00000650847|CHST8	ENSG00000124302|ENST00000650847|CHST8	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.2735778689384	3	405.272777	1212.7965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.492	1	34.317	33.817	34.817	1.8246								0	0	0	0.42693	1	13618	13618		0.23584	0.076522	1				29659	2224	14705	14764	34059	34059					0.19861396323767622
RRRLPRRRRQ	10	Unmodified	_RRRLPRRRRQ_					0	0	0			REV__ENST00000503648.1_1_16:1451355-1464692:-|nuORF	REV__ENST00000503648.1_1_16:1451355-1464692:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.6462280154228	3	483.978526	1448.91375	1.6073	0.00077791	4.1173	0.0019927	5.7246	0.0027706	483.9800230283777	35.675	0.25888	35.675	35.547	35.806	0					23	17	2	0	0	0	0.12559	1	14976	14976		0.77653	0	1	5155400	+		29660	8646	14706	14765	34060	34060					0.20724690307565652
RRRLPRRRRQ	10	Unmodified	_RRRLPRRRRQ_					0	0	0			REV__ENST00000503648.1_1_16:1451355-1464692:-|nuORF	REV__ENST00000503648.1_1_16:1451355-1464692:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	483.9814941287041	3	483.978526	1448.91375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.72	1	34.544	34.044	35.044	1.8246								0	0	0	0.6624	1	13712	13712		0.69767	0	1		+		29661	8646	14706	14765	34061	34061					0.20724690307565652
RRRLPYRRIHP	11	Unmodified	_RRRLPYRRIHP_					0	0	0		ENST00000292894.1_1_19:36530505-36530886:-|nuORF	ENST00000292894.1_1_19:36530505-36530886:-|nuORF	ENST00000292894.1_1_19:36530505-36530886:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3136779665947	3	507.311282	1518.91202	2.6784	0.0013588	-1.4984	-0.00076017	1.18	0.00059861	507.31058123141855	88.571	0.93191	88.571	88.119	89.051	0					61	29	3	0	0	0	1.0402	1	37138	37138		0.094841	0	1	985370			29662	5727	14707	14766	34062	34062					0.17331636498965963
RRRLRHALHRL	11	Unmodified	_RRRLRHALHRL_					0	0	0			REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.6509887576103	3	495.315026	1482.92325	3.2438	0.0016067	0.1717	8.5046E-05	3.4155	0.0016918	495.31502017349345	107.1	0.12202	107.26	107.21	107.34	0.16174					14	5	3	0	0	0	1.0405	1	45949	45949		0	0	1	9800500	+		29663	14447	14708	14767	34063	34063					0.2011045859310343
RRRLRHALHRL	11	Unmodified	_RRRLRHALHRL_					0	0	0			REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	495.315026	1482.92325	0.87684	0.00043431	3.7189	0.001842	4.5957	0.0022763	495.65064060519416	107.17	0.080017	107.17	107.13	107.21	0	-0.070313	0.0045634	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4405700	+		29664	14447	14708	14767							0.2011045859310343
RRRLRHALHRL	11	Unmodified	_RRRLRHALHRL_					0	0	0			REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	495.315026	1482.92325	3.1489	0.0015597	0.76158	0.00037722	3.9105	0.0019369	495.3157246764927	107.13	0.15109	107.29	107.19	107.34	0.15781	0.049078	0.00016901	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14894000	+		29665	14447	14708	14767							0.2011045859310343
RRRLRHALHRL	11	Unmodified	_RRRLRHALHRL_					0	0	0			REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	REV__nc|ENSG00000141644|Q9UIS9-9|MBD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	495.315026	1482.92325	3.2438	0.0016067	0.1717	8.5046E-05	3.4155	0.0016918	495.31502017349345	107.1	0.12202	107.26	107.21	107.34	0.16174	0.021236	-0.00070752	NaN	0	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9800500	+		29666	14447	14708	14767							0.2011045859310343
RRRLRVPRIP	10	Unmodified	_RRRLRVPRIP_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.4705993533134	4	330.471824	1317.85819	0.56057	0.00018525	-1.6039	-0.00053005	-1.0434	-0.0003448	330.4713022817203	48.369	1.0916	49.757	48.895	49.987	1.388					66	34	3	0	0	0	0.89803	1	20240	20240		0.15932	0.064481	1	1542500			29667	6167	14709	14768	34064	34064					0.21197464067267902
RRRLRVPRIP	10	Unmodified	_RRRLRVPRIP_					0	0	0		ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	ENST00000374057.3_1_9:117267080-117267632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	330.7225524783134	4	330.471824	1317.85819	1.9646	0.00064925	-2.8764	-0.00095058	-0.91182	-0.00030133	330.72158309013525	47.55	1.1145	49.526	48.999	50.113	1.976					82	35	3	0	0	0	0.89803	1	19879	19879		0.15932	0.064481	1	1578400			29668	6167	14709	14768	34065	34065					0.21197464067267902
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2429382205009	4	373.992323	1491.94019	-0.7981	-0.00029848	2.7268	0.0010198	1.9287	0.00072133	373.9932178807557	35.063	0.65382	35.063	34.556	35.209	0					61	28	3	0	0	0	1.0391	1	14678	14678		0.40827	0.40827	1	5376800	+		29669	14461	14710	14769	34066	34066					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.9933959841728	4	373.992323	1491.94019	-0.66583	-0.00024901	2.8782	0.0010764	2.2124	0.00082741	373.99338865128067	38.255	0.73866	38.255	37.972	38.711	0					61	32	2	0	0	0	1.0365	2	16042	16042;16121		1.2148	1.1315	1	4340300	+		29670	14461	14710	14769	34067;34068	34067					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.2442809939384	4	373.992323	1491.94019	1.3711	0.00051278	1.2632	0.00047243	2.6343	0.00098521	374.2435815341875	37.077	0.91357	37.382	37.148	38.061	0.30497					82	38	3	0	0	0	1.0391	1	15608	15608		0.40827	0.31342	1	3571900	+		29671	14461	14710	14769	34069	34069					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2440063357353	4	373.992323	1491.94019	-0.35472	-0.00013266	2.5906	0.00096885	2.2358	0.00083618	374.2440172511473	33.158	0.99734	34.436	33.584	34.581	1.2782					91	40	3	0	0	0	1.0391	1	13793	13793		0.40827	0.31342	1	10726000	+		29672	14461	14710	14769	34070	34070					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.9932739138603	4	373.992323	1491.94019	0.5411	0.00020237	2.1336	0.00079796	2.6747	0.0010003	373.9930616411784	32.354	1.0177	34.179	33.47	34.488	1.8246					89	38	4	0	0	0	1.039	1	13576	13576		0.45452	0.38125	1	4462100	+		29673	14461	14710	14769	34071	34071					0.21389521635683195
RRRLVIYIKIY	11	Unmodified	_RRRLVIYIKIY_					0	0	0			REV__nc|ENSG00000149295|P14416-3|DRD2	REV__nc|ENSG00000149295|P14416-3|DRD2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	373.992323	1491.94019	1.4212	0.00053151	0.79132	0.00029595	2.2125	0.00082745	374.2432048956651	38.115	0.08429	38.423	38.359	38.443	0.30857	0.084298	-0.0022747	NaN	1.2148	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1392900	+		29674	14461	14710	14769							0.21389521635683195
RRRLWRWWKLQ	11	Unmodified	_RRRLWRWWKLQ_					0	0	0		chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	MSMS	GG20161007_CRH_Patient100_A02_01	1	842.5016967654228	2	842.494585	1682.97462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.112	1	71.112	70.612	71.612	0								0	0	0	0.63775	1	29617	29617		0	0	1				29675	192	14711	14770	34072	34072					0.1604478256715538
RRRLWRWWKLQ	11	Unmodified	_RRRLWRWWKLQ_					0	0	0		chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.0020019412041	3	561.998815	1682.97462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.857	1	56.178	55.678	56.678	0.32088								0	0	0	0.63775	1	23389	23389		0	0	1				29676	192	14711	14770	34073	34073					0.1604478256715538
RRRLWRWWKLQ	11	Unmodified	_RRRLWRWWKLQ_					0	0	0		chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	MSMS	GG20161007_CRH_Patient100_W632_01	3	842.4977294802666	2	842.494585	1682.97462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.821	1	72.174	71.674	72.674	1.3536								0	0	0	0.63775	1	29716	29716		0	0	1				29677	192	14711	14770	34074	34074					0.1604478256715538
RRRLWRWWKLQ	11	Unmodified	_RRRLWRWWKLQ_					0	0	0		chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	MSMS	GG20161007_CRH_Patient100_W632_02	4	842.4971191287041	2	842.494585	1682.97462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.436	1	72.274	71.774	72.774	1.8378								0	0	0	0.63775	1	29545	29545		0	0	1				29678	192	14711	14770	34075	34075					0.1604478256715538
RRRLWRWWWKL	11	Unmodified	_RRRLWRWWWKL_					0	0	0		chr12:54283228-54283827|429|62.96|0.0|22.59|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|429|62.96|0.0|22.59|+|1|HNRNPA1,HNRNPA1|2	chr12:54283228-54283827|429|62.96|0.0|22.59|+|1|HNRNPA1,HNRNPA1|2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	349.9813720583916	5	349.206347	1740.99535	1.6899	0.00059012	-2.0013	-0.00069888	-0.31146	-0.00010876	349.40647620783824	55.31	0.55375	55.631	55.372	55.926	0.32088					21	17	2	0	0	0	0.14606	1	23204	23204		0.08335	0.08335	1	925140			29679	193	14712	14771	34076	34076					0.15449372946795847
RRRNMRKCYPS	11	Unmodified	_RRRNMRKCYPS_					0	0	0			REV__nc|ENSG00000156802|Q6PL18-2|ATAD2	REV__nc|ENSG00000156802|Q6PL18-2|ATAD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.9273559451103	3	489.59084	1465.75069	0.91896	0.00044992	1.2429	0.00060849	2.1618	0.0010584	489.5913894867563	13.101	0.25285	13.201	13.059	13.312	0.09944					22	7	4	0	0	0	1.0131	1	5472	5472		1.2148	0	1	6681800	+		29680	10519	14713	14772	34077	34077					0.03644383079245017
RRRPGPRRL	9	Unmodified	_RRRPGPRRL_					0	0	0		nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1856262087822	3	388.583002	1162.72718	1.6716	0.00064955	-2.6389	-0.0010254	-0.96731	-0.00037588	388.58170578704085	39.321	0.59787	40.618	40.443	41.041	1.2961					35	19	3	0	0	0	0.11901	1	16472	16472		1.0715	0	1	1667700			29681	1005	14714	14773	34078	34078					0.15232073419224434
RRRPGSSD	8	Unmodified	_RRRPGSSD_					0	0	0		nc|ENSG00000037280|P35916-1|FLT4;ENSG00000037280|ENST00000261937|FLT4	nc|ENSG00000037280|P35916-1|FLT4	nc|ENSG00000037280|P35916-1|FLT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7481567263603	2	465.746839	929.479125	3.8618	0.0017986	0.15079	7.0231E-05	4.0126	0.0018689	465.7465716256921	86.728	0.85979	87.82	87.381	88.241	1.0918					81	31	3	0	0	0	0.89008	3	36557	36557;36611;36662		2.5775	0	1	57769000			29682	650	14715	14774	34079;34080;34081	34079					0.011564800409018972
RRRPGSSD	8	Unmodified	_RRRPGSSD_					0	0	0		nc|ENSG00000037280|P35916-1|FLT4;ENSG00000037280|ENST00000261937|FLT4	nc|ENSG00000037280|P35916-1|FLT4	nc|ENSG00000037280|P35916-1|FLT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7476989626884	2	465.746839	929.479125	4.4611	0.0020777	-0.71149	-0.00033138	3.7496	0.0017464	465.74620057776855	86.369	0.84062	87.916	87.512	88.352	1.547					74	30	3	0	0	0	0.89008	4	36335	36335;36399;36451;36518		2.5775	0	1	53899000			29683	650	14715	14774	34082;34083;34084;34085	34082					0.011564800409018972
RRRPLLPFKRT	11	Unmodified	_RRRPLLPFKRT_					0	0	0			REV__nc|ENSG00000183169|Q3SYA9|POM121L1P	REV__nc|ENSG00000183169|Q3SYA9|POM121L1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.6427490115166	3	480.640516	1438.89972	3.2555	0.0015647	1.1585	0.00055682	4.414	0.0021216	480.64121774223776	107.17	0.18028	107.33	107.23	107.41	0.15781					18	8	3	0	0	0	1.0402	1	46028	46028		0.094841	0	1	18107000	+		29684	14504	14716	14775	34086	34086					0.19782600035910036
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2508727908134	4	399.251895	1592.97847	-1.0406	-0.00041546	-2.2675	-0.00090532	-3.3081	-0.0013208	399.25098544088	13.129	0.89428	13.129	12.715	13.61	0					38	28	2	0	0	0	1.0405	1	5442	5442		0	0	1	5807800	+		29685	12136	14717	14776	34087	34087					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.9996215701103	3	532.000101	1592.97847	1.3438	0.00071491	0.30981	0.00016482	1.6536	0.00087973	531.99931983285	98.514	0.10719	98.514	98.449	98.556	0					9	3	3	0	0	0	1.0405	1	41206	41206		0	0	1	34367000	+		29686	12136	14717	14776	34088	34088					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	532.0002929568291	3	532.000101	1592.97847	2.8543	0.0015185	-1.6445	-0.00087488	1.2097	0.00064359	531.9988593341502	98.498	0.1173	98.579	98.504	98.621	0.080376					13	4	4	0	0	0	1.0402	1	41219	41219		0.08335	0	1	48175000	+		29687	12136	14717	14776	34089	34089					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2523376345634	4	399.251895	1592.97847	2.9651	0.0011838	-1.9222	-0.00076746	1.0428	0.00041635	399.25113166101056	72.792	0.66144	74.122	73.973	74.634	1.3298					25	20	2	0	0	0	1.0402	1	30561	30561		0.094841	0.094841	1	1607400	+		29688	12136	14717	14776	34090	34090					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.0004150271416	3	532.000101	1592.97847	3.6108	0.0019209	-0.66645	-0.00035455	2.9443	0.0015664	531.9988898971363	98.401	0.11301	98.629	98.556	98.669	0.22776					7	3	3	0	0	0	1.0405	1	41431	41431		0	0	1	11940000	+		29689	12136	14717	14776	34091	34091					0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	532.000101	1592.97847	1.3438	0.00071491	0.30981	0.00016482	1.6536	0.00087973	531.99931983285	98.514	0.10719	98.514	98.449	98.556	0	-0.061481	0.0017947	NaN	0.08335	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34367000	+		29690	12136	14717	14776							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	399.251895	1592.97847	-1.0406	-0.00041546	-2.2675	-0.00090532	-3.3081	-0.0013208	399.25098544088	13.129	0.89428	13.129	12.715	13.61	0	0	0	NaN	0	38	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5807800	+		29691	12136	14717	14776							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	532.000101	1592.97847	2.8543	0.0015185	-1.6445	-0.00087488	1.2097	0.00064359	531.9988593341502	98.498	0.1173	98.579	98.504	98.621	0.080376	0.0030691	-0.0013244	NaN	0.08335	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48175000	+		29692	12136	14717	14776							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	532.000101	1592.97847	3.6108	0.0019209	-0.66645	-0.00035455	2.9443	0.0015664	531.9988898971363	98.401	0.11301	98.629	98.556	98.669	0.22776	0.052953	0.00023656	NaN	0.08335	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11940000	+		29693	12136	14717	14776							0.20570265113542519
RRRPRRRTRRQ	11	Unmodified	_RRRPRRRTRRQ_					0	0	0			REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	REV__ENST00000245923.8_1_19:45998158-46000175:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	532.000101	1592.97847	3.5018	0.001863	2.5315	0.0013468	6.0333	0.0032097	532.0008771556954	98.325	0.11752	98.581	98.534	98.651	0.25636	0.0054588	0.0053405	NaN	0.08335	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7416500	+		29694	12136	14717	14776							0.20570265113542519
RRRQRWRRRRH	11	Unmodified	_RRRQRWRRRRH_					0	0	0		ENST00000372724.5_1_10:76586363-76598485:+|nuORF	ENST00000372724.5_1_10:76586363-76598485:+|nuORF	ENST00000372724.5_1_10:76586363-76598485:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	860.2793456912041	2	860.015404	1718.01626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.528	1	95.93	95.43	96.43	0.40208								0	0	0	0.63775	1	40194	40194		0	0	1				29695	6144	14718	14777	34092	34092					0.18596776099025192
RRRRARLLQHN	11	Unmodified	_RRRRARLLQHN_					0	0	0		sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	sp|Q6SW94|VGLI_HCMVMUL37immediateearlyglycoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL37PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.6361877322197	3	492.634536	1474.88178	3.2872	0.0016194	0.41141	0.00020268	3.6987	0.0018221	492.63459499693073	88.807	1.3038	89.03	88.375	89.679	0.22359					105	40	3	0	0	0	1.0405	1	37053	37053		0	0	1	2745400			29696	16002	14719	14778	34093	34093					0.16333277833791726
RRRRARTT	8	Unmodified	_RRRRARTT_					0	0	0			REV__ENST00000321892.8_1_17:65822219-65850151:+|nuORF	REV__ENST00000321892.8_1_17:65822219-65850151:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	358.2235900759697	3	358.223473	1071.64859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.8	1	103.86	103.36	104.36	0.059502								0	0	0	1.0178	1	43633	43633		0.40072	0	1		+		29697	12410	14720	14779	34094	34094					0.11563221114124644
RRRRAVWRPWR	11	Unmodified	_RRRRAVWRPWR_					0	0	0			REV__ENST00000370406.7_1_X:149106490-149106673:-|nuORF	REV__ENST00000370406.7_1_X:149106490-149106673:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0453063845634	4	399.490814	1593.93415	-0.07755	-3.0981E-05	3.8862	0.0015525	3.8087	0.0015215	399.49237643476624	34.847	0.22017	34.847	34.775	34.995	0					8	6	2	0	0	0	0.14606	1	14611	14611		0	0	1	731740	+		29698	12659	14721	14780	34095	34095					0.160938609673849
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	367.7175781130791	4	367.717353	1466.84031	-0.54601	-0.00020078	2.9873	0.0010985	2.4413	0.00089772	367.7181436555734	54.476	0.95253	54.476	53.935	54.888	0					87	30	4	0	0	0	1.0224	1	22701	22701		2.4348	1.22	1	3853800	+		29699	12855	14722	14781	34096	34096					0.12556097074457284
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	367.7176696658134	4	367.717353	1466.84031	-0.051507	-1.894E-05	0.28451	0.00010462	0.23301	8.5681E-05	367.7173385562626	52.428	1.1378	53.825	53.46	54.598	1.3966					70	35	3	0	0	0	1.0254	1	21976	21976		2.2527	1.0379	1	4176000	+		29700	12855	14722	14781	34097	34097					0.12556097074457284
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	367.7170593142509	4	367.717353	1466.84031	0.81474	0.0002996	-0.62702	-0.00023057	0.18773	6.903E-05	367.71709616949835	51.882	0.92165	53.854	53.335	54.257	1.9722					59	29	3	0	0	0	1.0254	3	21668	21668;21734;21786		2.2527	1.0379	1	3687600	+		29701	12855	14722	14781	34098;34099;34100	34098					0.12556097074457284
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	367.717353	1466.84031	-0.53021	-0.00019497	2.3803	0.00087528	1.8501	0.00068032	367.71842666089685	53.747	0.50897	53.747	53.489	53.998	0	-0.12105	0.003065	NaN	2.2527	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574850	+		29702	12855	14722	14781							0.12556097074457284
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	367.717353	1466.84031	1.6661	0.00061267	0.09028	3.3198E-05	1.7564	0.00064587	367.7173827341719	53.724	1.164	54.047	53.442	54.606	0.32283	0.17903	-0.00030337	NaN	2.2527	75	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3527700	+		29703	12855	14722	14781							0.12556097074457284
RRRRDTQRAPR	11	Unmodified	_RRRRDTQRAPR_					0	0	0			REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	REV__ENST00000396757.5_1_9:35615990-35616170:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	367.717353	1466.84031	0.81474	0.0002996	-0.62702	-0.00023057	0.18773	6.903E-05	367.71709616949835	51.882	0.92165	53.854	53.335	54.257	1.9722	-0.014554	-0.0013584	NaN	2.2527	59	29	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3687600	+		29704	12855	14722	14781							0.12556097074457284
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2506286501884	4	398.998471	1591.96478	0.16024	6.3934E-05	0.45144	0.00018012	0.61167	0.00024406	399.2496632800544	41.124	0.80019	41.124	40.794	41.594	0					74	24	4	0	0	0	1.0405	5	17091	17091;17137;17177;17217;17284		0	0	1	4030700	+		29705	9606	14723	14782	34101;34102;34103;34104;34105	34101					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2494079470634	4	398.998471	1591.96478	0.20579	8.2111E-05	0.023756	9.4784E-06	0.22955	9.159E-05	399.24937958441996	42.303	1.2265	42.303	41.531	42.758	0					136	38	5	0	0	0	1.0405	7	17489	17489;17533;17581;17631;17674;17724;17778		0	0	1	5425900	+		29706	9606	14723	14782	34106;34107;34108;34109;34110;34111;34112	34106					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.2220947146416	5	319.400232	1591.96478	-2.2274	-0.00071143	1.293	0.00041299	-0.93436	-0.00029844	319.4005307781124	41.014	0.73697	41.014	40.794	41.531	0					78	22	4	0	0	0	0.14606	1	17347	17347		0	0	1	7721900	+		29707	9606	14723	14782	34113	34113					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	399.2494079470634	4	398.998471	1591.96478	0.20579	8.2111E-05	0.023756	9.4784E-06	0.22955	9.159E-05	399.24937958441996	42.303	1.2265	42.303	41.531	42.758	0					136	38	5	0	0	0	0.14606	1	17489	17489		0	0	1	5425900	+		29708	9606	14723	14782	34114	34114					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2490722537041	4	398.998471	1591.96478	1.5509	0.00061882	-1.702	-0.0006791	-0.15109	-6.0283E-05	399.2487715907972	41.936	1.5066	43.276	42.633	44.14	1.3399					110	47	4	0	0	0	1.0402	1	17600	17600		0.08335	0.08335	1	3344000	+		29709	9606	14723	14782	34115	34115					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.9984313845634	4	398.998471	1591.96478	0.64177	0.00025606	-1.4267	-0.00056927	-0.78497	-0.0003132	399.249026890886	37.701	0.69114	39.521	39.283	39.974	1.8202					42	22	2	0	0	0	1.0402	1	15929	15929		0.094841	0.094841	1	8648500	+		29710	9606	14723	14782	34116	34116					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2493774294853	4	398.998471	1591.96478	1.7198	0.0006862	-1.45	-0.00057857	0.26977	0.00010764	399.24896936818476	41.346	1.5258	43.239	42.61	44.136	1.8927					122	48	4	0	0	0	1.0402	1	17509	17509		0.094841	0.094841	1	4654600	+		29711	9606	14723	14782	34117	34117					0.19247594561784354
RRRRFKVQYRK	11	Unmodified	_RRRRFKVQYRK_					0	0	0			REV__ENSG00000122406|ENST00000370321|RPL5	REV__ENSG00000122406|ENST00000370321|RPL5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		4	398.998471	1591.96478	0.16024	6.3934E-05	0.45144	0.00018012	0.61167	0.00024406	399.2496632800544	41.124	0.80019	41.124	40.794	41.594	0	0	0	NaN	0	74	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4030700	+		29712	9606	14723	14782							0.19247594561784354
RRRRFVVV	8	Unmodified	_RRRRFVVV_					0	0	0		ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	ENST00000502486.5_2_4:42153705-42154329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3546630740166	2	544.351609	1086.68866	2.7549	0.0014997	1.0331	0.00056239	3.7881	0.002062	544.35213255309	106.04	0.18752	106.1	106	106.19	0.054558					25	8	5	0	0	0	0.89176	1	45138	45138		0.79363	0.19213	1	203900000			29713	6979	14724	14783	34118	34118					0.14878767784693991
RRRRGNLP	8	Unmodified	_RRRRGNLP_					0	0	0		nc|ENSG00000177426|Q15583-4|TGIF1;ENSG00000177426|ENST00000343820|TGIF1;nc|ENSG00000177426|Q15583-3|TGIF1;KLHDC10-TGIF1|1|fusion;nc|ENSG00000177426|Q15583|TGIF1	nc|ENSG00000177426|Q15583-4|TGIF1	nc|ENSG00000177426|Q15583-4|TGIF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	342.2126647830009	3	342.212686	1023.61623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.697	1	28.697	28.197	29.197	0								0	0	0	1.0178	1	12009	12009		1.6526	0.58116	1				29714	4445	14725	14784	34119	34119					0.10536433711126847
RRRRHKKP	8	Unmodified	_RRRRHKKP_					0	0	0		ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.5786620974541	3	378.57948	1132.71661	-0.77616	-0.00029384	-0.57448	-0.00021749	-1.3506	-0.00051132	378.57927903930755	32.072	1.2716	32.072	31.789	33.06	0					165	40	5	0	0	0	0.89152	3	13508	13508;13625;13664		1.6526	1.6526	1	67199000			29715	3895	14726	14785	34120;34121;34122	34120					0.1555609076476685
RRRRHKKP	8	Unmodified	_RRRRHKKP_					0	0	0		ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5787231326103	3	378.57948	1132.71661	1.0692	0.00040476	-2.1623	-0.0008186	-1.0931	-0.00041384	378.5787845962251	30.785	1.2845	31.071	30.674	31.959	0.2859					126	42	5	0	0	0	0.89185	4	12889	12889;12928;12981;13037		0.45834	0.18932	1	107130000			29716	3895	14726	14785	34123;34124;34125;34126	34123					0.1555609076476685
RRRRHKKP	8	Unmodified	_RRRRHKKP_					0	0	0		ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.5786315798759	3	378.57948	1132.71661	0.065002	2.4608E-05	-1.9672	-0.00074475	-1.9022	-0.00072014	378.57885467350343	29.498	0.63838	30.78	30.404	31.042	1.2825					97	20	6	0	0	0	0.89185	2	12403	12403;12442		0.45834	0.45834	1	157790000			29717	3895	14726	14785	34127;34128	34127					0.1555609076476685
RRRRHKKP	8	Unmodified	_RRRRHKKP_					0	0	0		ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	ENSG00000166343|ENST00000299432|MSS51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5791503787041	3	378.57948	1132.71661	0.50186	0.00018999	-2.3722	-0.00089806	-1.8703	-0.00070806	378.5788022668036	28.964	0.753	30.763	30.298	31.051	1.7987					82	24	6	0	0	0	0.89152	1	12175	12175		1.6526	0.58116	1	143200000			29718	3895	14726	14785	34129	34129					0.1555609076476685
RRRRHRHLAV	10	Unmodified	_RRRRHRHLAV_					0	0	0		ENST00000589935.1_1_18:54318575-54318788:+|nuORF	ENST00000589935.1_1_18:54318575-54318788:+|nuORF	ENST00000589935.1_1_18:54318575-54318788:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	678.9207641482353	2	678.919044	1355.82354	2.6522	0.0018006	-0.85598	-0.00058114	1.7962	0.0012195	678.918345455609	96.666	0.21385	96.771	96.664	96.878	0.10499					20	6	4	0	0	0	0.89803	1	40488	40488		0.45834	0.057624	1	15863000			29719	7479	14727	14786	34130	34130					0.15985640979170057
RRRRHRQRLL	10	Unmodified	_RRRRHRQRLL_					0	0	0		ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	ENST00000403681.6_2_12:66218024-66218900:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2537109255791	4	362.482989	1445.90285	-0.74145	-0.00026876	3.333	0.0012081	2.5915	0.00093938	362.73488225993276	44.646	0.7457	44.646	44.409	45.155	0					59	23	3	0	0	0	0.12561	1	18736	18736		0.13989	0.04505	1	2666500			29720	6352	14728	14787	34131	34131					0.1977328793329889
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1018249392509	4	370.489542	1477.92906	1.1812	0.00043764	0.11385	4.2179E-05	1.2951	0.00047982	370.48970041907944	34.165	0.43249	34.462	34.268	34.701	0.29701					21	14	2	0	0	0	0.14606	1	14386	14386		0	0	1	1198300			29721	5789	14729	14788	34132	34132					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1017944216728	4	370.489542	1477.92906	1.007	0.00037307	0.90458	0.00033514	1.9115	0.0007082	370.74020820242504	30.627	1.6772	30.913	30.53	32.207	0.2859					140	55	3	0	0	0	0.14606	1	13328	13328		0	0	1	1708700			29722	5789	14729	14788	34133	34133					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1014892458916	4	370.489542	1477.92906	0.9358	0.0003467	0.41323	0.0001531	1.349	0.0004998	370.48965737976073	29.74	0.63803	30.026	29.566	30.204	0.2859					26	20	2	0	0	0	0.14606	1	12408	12408		0	0	1	2361000			29723	5789	14729	14788	34134	34134					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1011535525322	4	370.489542	1477.92906	0.029231	1.083E-05	0.49538	0.00018353	0.52461	0.00019436	370.48956941329624	28.451	0.39839	29.73	29.515	29.913	1.2789					23	12	3	0	0	0	0.14606	1	11948	11948		0	0	1	2287100			29724	5789	14729	14788	34135	34135					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1012451052666	4	370.489542	1477.92906	-0.35776	-0.00013255	0.87813	0.00032534	0.52037	0.00019279	370.48957606002114	32.109	0.28026	33.39	33.307	33.587	1.2813					16	9	2	0	0	0	0.14606	1	13514	13514		0	0	1	1559900			29725	5789	14729	14788	34136	34136					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1013671755791	4	370.489542	1477.92906	0.44715	0.00016566	0.25035	9.2752E-05	0.6975	0.00025842	370.49001075918875	28.949	0.69128	30.747	30.359	31.051	1.7987					30	22	2	0	0	0	0.14606	1	12008	12008		0	0	1	2104900			29726	5789	14729	14788	34137	34137					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1012756228447	4	370.489542	1477.92906	0.40256	0.00014915	0.67645	0.00025062	1.079	0.00039976	370.4898314028033	27.822	0.46444	29.598	29.385	29.85	1.7754					29	14	3	0	0	0	0.14606	1	11631	11631		0	0	1	2208500			29727	5789	14729	14788	34138	34138					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1017639040947	4	370.489542	1477.92906	0.37227	0.00013792	0.35338	0.00013092	0.72564	0.00026884	370.48969719767507	27.042	0.55433	28.789	28.495	29.05	1.747					32	17	2	0	0	0	0.14606	1	11409	11409		0	0	1	3912700			29728	5789	14729	14788	34139	34139					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1014282107353	4	370.489542	1477.92906	0.3882	0.00014382	0.56104	0.00020786	0.94924	0.00035168	370.48973115057333	27.473	0.33796	29.249	29.047	29.385	1.7754					19	10	2	0	0	0	0.14606	1	11541	11541		0	0	1	2039900			29729	5789	14729	14788	34140	34140					0.20921557104793465
RRRRKGRQRPI	11	Unmodified	_RRRRKGRQRPI_					0	0	0		ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	ENST00000308664.10_1_12:110719006-110719138:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1016418337822	4	370.489542	1477.92906	0.52559	0.00019472	0.76341	0.00028284	1.289	0.00047756	370.7406139348244	31.925	0.31782	33.749	33.577	33.895	1.8246					25	11	3	0	0	0	0.14606	1	13381	13381		0	0	1	1184800			29730	5789	14729	14788	34141	34141					0.20921557104793465
RRRRKHRRMLR	11	Unmodified	_RRRRKHRRMLR_					0	0	0			REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	REV__ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.0065185427666	3	541.006198	1619.99677	3.3204	0.0017963	-1.5434	-0.000835	1.7769	0.00096133	541.0052060239941	98.555	0.089539	98.812	98.765	98.855	0.25636					6	2	3	0	0	0	1.0405	1	41483	41483		0	0	1	2782800	+		29731	10618	14730	14789	34142	34142					0.21156683763911133
RRRRKKQKRRE	11	Unmodified	_RRRRKKQKRRE_					0	0	0		ENST00000325083.12_1_8:17815084-17817658:+|nuORF	ENST00000325083.12_1_8:17815084-17817658:+|nuORF	ENST00000325083.12_1_8:17815084-17817658:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2511169314384	4	400.008099	1596.00329	1.5299	0.00061196	0.34793	0.00013918	1.8778	0.00075114	400.2576630741352	46.931	0.82281	48.314	47.84	48.663	1.3825					41	25	2	0	0	0	0.14606	1	19652	19652		0	0	1	766380			29732	5865	14731	14790	34143	34143					0.22912900196274677
RRRRKKQKRRE	11	Unmodified	_RRRRKKQKRRE_					0	0	0		ENST00000325083.12_1_8:17815084-17817658:+|nuORF	ENST00000325083.12_1_8:17815084-17817658:+|nuORF	ENST00000325083.12_1_8:17815084-17817658:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	400.008099	1596.00329	1.8336	0.00073344	0.37078	0.00014831	2.2043	0.00088175	400.25840698941056	48.047	0.68515	48.377	48.103	48.788	0.33034	0.03179	9.6765E-06	NaN	0	35	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	854930			29733	5865	14731	14790							0.22912900196274677
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.0996581912041	4	373.993455	1491.94471	-0.6899	-0.00025802	0.15854	5.9292E-05	-0.53137	-0.00019873	373.99354497205474	37.75	0.50037	37.75	37.494	37.994	0					27	16	2	0	0	0	0.14606	1	15804	15804		0	0	1	1910300	+		29734	12294	14732	14791	34144	34144					0.21841843621814405
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2442504763603	4	373.993455	1491.94471	0.5411	0.00020237	-0.89137	-0.00033337	-0.35027	-0.000131	373.9930616411784	32.354	1.0177	34.179	33.47	34.488	1.8246					89	38	4	0	0	0	1.0402	1	13625	13625		0.094841	0.094841	1	4462100	+		29735	12294	14732	14791	34145	34145					0.21841843621814405
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2427856326103	4	373.993455	1491.94471	0.53279	0.00019926	-1.3966	-0.00052232	-0.8638	-0.00032306	373.99244365924085	32.711	0.17091	34.536	34.461	34.631	1.8246					19	9	3	0	0	0	1.0391	1	13702	13702		0.40827	0.31342	1	3364800	+		29736	12294	14732	14791	34146	34146					0.21841843621814405
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.9933959841728	4	373.993455	1491.94471	0.51587	0.00019293	-0.94355	-0.00035288	-0.42768	-0.00015995	374.2438702385707	33.608	0.13703	35.431	35.386	35.523	1.8227					15	12	2	0	0	0	1.0369	1	14094	14094		1.1098	0	1	11203000	+		29737	12294	14732	14791	34147	34147					0.21841843621814405
RRRRKKRSPRP	11	Unmodified	_RRRRKKRSPRP_					0	0	0			REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	REV__ENST00000296490.7_1_3:52312489-52312597:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	373.993455	1491.94471	0.51587	0.00019293	-0.94355	-0.00035288	-0.42768	-0.00015995	374.2438702385707	33.608	0.13703	35.431	35.386	35.523	1.8227	0.18381	-0.00043251	NaN	1.1098	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11203000	+		29738	12294	14732	14791							0.21841843621814405
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	306.0761901736259	5	305.398332	1521.95528	0.14356	4.3843E-05	0.21042	6.4261E-05	0.35398	0.0001081	305.59894960984263	30.211	0.9766	32.026	31.615	32.591	1.8151					71	31	3	0	0	0	0.14606	1	12595	12595		0	0	1	1316600	+		29739	12409	14733	14792	34148	34148					0.21517826276249252
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		5	305.398332	1521.95528	0.54746	0.00016719	0.96493	0.00029469	1.5124	0.00046188	305.3986182480498	32.076	0.96047	32.369	31.934	32.895	0.29253	0.11735	3.2292E-05	NaN	0	67	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1188200	+		29740	12409	14733	14792							0.21517826276249252
RRRRKLRRPTQ	11	Unmodified	_RRRRKLRRPTQ_					0	0	0			REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	REV__ENST00000321448.12_1_11:74648098-74660104:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		5	305.398332	1521.95528	-0.52358	-0.0001599	1.601	0.00048896	1.0775	0.00032906	305.3987106990433	31.078	0.75174	32.359	31.903	32.655	1.2813	0.10751	0.0010036	NaN	0	30	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1280800	+		29741	12409	14733	14792							0.21517826276249252
RRRRKPPRL	9	Unmodified	_RRRRKPPRL_					0	0	0			REV__ENST00000551269.1_1_12:50037029-50037194:+|nuORF	REV__ENST00000551269.1_1_12:50037029-50037194:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	309.1733276247978	4	309.457445	1233.80067	0.90382	0.00027969	0.55352	0.00017129	1.4573	0.00045098	309.4576486257896	38.453	1.9106	38.762	38.561	40.472	0.30857					127	70	2	0	0	0	0.11957	1	16590	16590		0	0	1	11280000	+		29742	9308	14734	14793	34149	34149					0.19312621861695334
RRRRKRAPKIW	11	Unmodified	_RRRRKRAPKIW_					0	0	0			REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.1916686892509	5	305.399137	1521.9593	-2.5479	-0.00077812	0.53258	0.00016265	-2.0153	-0.00061547	305.39934150695166	34.466	0.8655	34.466	34.189	35.055	0					58	28	3	0	0	0	0.14606	1	14379	14379		0	0	1	878660	+		29743	11313	14735	14794	34150	34150					0.21919915769967702
RRRRKRAPKIW	11	Unmodified	_RRRRKRAPKIW_					0	0	0			REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	REV__nc|ENSG00000181090|Q9H9B1-4|EHMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.1916686892509	5	305.399137	1521.9593	-2.5772	-0.00078708	0.71311	0.00021778	-1.8641	-0.00056929	305.3994760895932	33.758	0.61602	33.758	33.515	34.131	0					22	19	2	0	0	0	0.14606	1	14189	14189		0	0	1	761320	+		29744	11313	14735	14794	34151	34151					0.21919915769967702
RRRRKRRHIT	10	Unmodified	_RRRRKRRHIT_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.7328063845634	4	359.482989	1433.90285	0.726	0.00026099	-1.9602	-0.00070465	-1.2342	-0.00044367	359.4821179646642	27.451	1.1834	27.722	26.995	28.179	0.27119					153	38	5	0	0	0	0.89803	1	11608	11608		0.12286	0.028024	1	28988000	+		29745	14387	14736	14795	34152	34152					0.2032528793331494
RRRRKRRRMK	10	Unmodified	_RRRRKRRRMK_					0	0	0		ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	ENST00000235372.11_1_1:14105080-14105206:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1283447146416	5	300.597027	1497.94875	0.10186	3.062E-05	4.025	0.0012099	4.1269	0.0012405	300.79891361607133	23.996	0.12519	25.237	25.175	25.3	1.241					5	3	2	0	0	0	0.1256	1	10042	10042		0	0	1	149600			29746	5558	14737	14796	34153	34153					0.21969609843858962
RRRRKVPPSGS	11	Unmodified	_RRRRKVPPSGS_					0	0	0		ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant;ARHGEF17|p.G1624Rfs*4|1|0.4|ENSG00000110237|chr11:73362607-73362608|-/A|frameshift_variant;ENSG00000110237|ENST00000263674|ARHGEF17	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	432.5980712771416	3	432.597088	1294.76943	1.0161	0.00043957	0.15374	6.6507E-05	1.1698	0.00050607	432.59715121299723	95.936	0.31647	95.936	95.746	96.063	0					33	10	4	0	0	0	1.0365	1	40073	40073		1.2148	0	1	39971000			29747	75	14738	14797	34154	34154					0.13384004036925035
RRRRKVPPSGS	11	Unmodified	_RRRRKVPPSGS_					0	0	0		ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant;ARHGEF17|p.G1624Rfs*4|1|0.4|ENSG00000110237|chr11:73362607-73362608|-/A|frameshift_variant;ENSG00000110237|ENST00000263674|ARHGEF17	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	ARHGEF17|p.Y1216Sfs*5|1|0.09|ENSG00000110237|chr11:73355937-73355937|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.5994140505791	3	432.597088	1294.76943	3.3225	0.0014373	2.994	0.0012952	6.3164	0.0027325	432.5982909218583	95.12	0.39565	95.522	95.314	95.709	0.40208					54	16	4	0	0	0	1.0365	1	40078	40078		1.2148	0.14337	1	6816700			29748	75	14738	14797	34155	34155					0.13384004036925035
RRRRLARNRF	10	Unmodified	_RRRRLARNRF_					0	0	0		nc|ENSG00000156299|Q13009-2|TIAM1;ENSG00000156299|ENST00000541036|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	nc|ENSG00000156299|Q13009-2|TIAM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.9599792361259	3	467.62386	1399.84975	1.8603	0.00086993	0.49649	0.00023217	2.3568	0.0011021	467.62407823908427	97.271	0.24709	97.271	97.136	97.383	0					26	7	6	0	0	0	0.89803	1	40637	40637		0.13989	0.04505	1	54606000			29749	3444	14739	14798	34156	34156					0.16581910150625845
RRRRLLIIFF	10	Unmodified	_RRRRLLIIFF_					0	0	0			REV__tr|A0A553SFB3|A0A553SFB3_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08605PE=3SV=1	REV__tr|A0A553SFB3|A0A553SFB3_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08605PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	463.1470825076103	3	463.969974	1388.88809	2.7296	0.0012665	2.0285	0.00094118	4.7581	0.0022076	463.9709892325567	47.133	1.0893	49.109	48.746	49.836	1.976					54	34	2	0	0	0	0.12561	1	20034	20034		0	0	1	5472900	+		29750	14700	14740	14799	34157	34157					0.20920403012587485
RRRRLWRWWKL	11	Unmodified	_RRRRLWRWWKL_					0	0	0		chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	chr12:54283225-54283827|429|79.9|0.0|22.93|+|1|HNRNPA1,HNRNPA1|2	MSMS	GG20161007_CRH_Patient100_W632_01	3	856.5226318240166	2	856.515851	1711.01715	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.966	1	100.16	99.659	100.66	0.19331								0	0	0	0.63775	1	42074	42074		0	0	1				29751	192	14741	14800	34158	34158					0.19008177695377526
RRRRPLAP	8	Unmodified	_RRRRPLAP_					0	0	0			REV__ENST00000367595.3_1_1:180471572-180471884:-|nuORF	REV__ENST00000367595.3_1_1:180471572-180471884:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3284484744072	2	511.328134	1020.64171	2.9179	0.001492	-2.9649	-0.001516	-0.046981	-2.4023E-05	511.32669990607957	80.498	0.58011	81.749	81.45	82.03	1.2512					63	18	5	0	0	0	0.89176	1	33751	33751		0.79363	0	1	76868000	+		29752	12629	14742	14801	34159	34159					0.13221908233538215
RRRRPLAP	8	Unmodified	_RRRRPLAP_					0	0	0			REV__ENST00000367595.3_1_1:180471572-180471884:-|nuORF	REV__ENST00000367595.3_1_1:180471572-180471884:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3276550173759	2	511.328134	1020.64171	1.4928	0.00076333	-3.14	-0.0016056	-1.6472	-0.00084224	511.32701290936313	80.232	0.60221	81.948	81.568	82.17	1.7167					70	19	6	0	0	0	0.89176	1	33632	33632		0.79363	0	1	81153000	+		29753	12629	14742	14801	34160	34160					0.13221908233538215
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2235900759697	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.748	1	62.748	62.248	63.248	0								0	0	0	1.0178	1	26161	26161		0.40072	0	1		+		29754	14577	14743	14802	34161	34161					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2231017947197	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.072	1	66.072	65.572	66.572	0								0	0	0	1.0178	1	27528	27528		0.40072	0	1		+		29755	14577	14743	14802	34162	34162					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2233459353447	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.411	1	66.411	65.911	66.911	0								0	0	0	1.0178	1	27664	27664		0.40072	0	1		+		29756	14577	14743	14802	34163	34163					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2239257693291	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.217	1	72.217	71.717	72.717	0								0	0	0	1.0178	1	30071	30071		0.40072	0	1		+		29757	14577	14743	14802	34164	34164					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2220031619072	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.455	1	72.455	71.955	72.955	0								0	0	0	1.0178	1	30168	30168		0.40072	0	1		+		29758	14577	14743	14802	34165	34165					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2256957888603	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.369	1	74.369	73.869	74.869	0								0	0	0	1.0178	1	30964	30964		0.40072	0	1		+		29759	14577	14743	14802	34166	34166					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2231017947197	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.779	1	95.779	95.279	96.279	0								0	0	0	1.0178	1	40036	40036		0.40072	0	1		+		29760	14577	14743	14802	34167	34167					0.13621310607823034
RRRRPPAK	8	Unmodified	_RRRRPPAK_					0	0	0			REV__nc|ENSG833|P61570|ERVK-25_env	REV__nc|ENSG833|P61570|ERVK-25_env	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2237731814384	3	346.224814	1035.65261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.364	1	97.364	96.864	97.864	0								0	0	0	1.0178	1	40705	40705		0.40072	0	1		+		29761	14577	14743	14802	34168	34168					0.13621310607823034
RRRRPRRRVP	10	Unmodified	_RRRRPRRRVP_					0	0	0			REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	REV__ENST00000358344.7_1_5:177631560-177631635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.9804870486259	4	351.980347	1403.89228	-1.3556	-0.00047714	-0.032283	-1.1363E-05	-1.3879	-0.0004885	351.9802264837377	36.565	0.81154	36.565	36.27	37.081	0					133	55	3	0	0	0	0.89803	1	15263	15263		0.13989	0.056541	1	35389000	+		29762	12571	14744	14803	34169	34169					0.20649305278834618
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1988403201103	4	303.199536	1208.76904	-0.38583	-0.00011698	-0.79887	-0.00024222	-1.1847	-0.0003592	303.19926330285165	29.807	1.345	31.089	30.312	31.657	1.2825					134	43	4	0	0	0	0.847	1	12469	12469		0.96228	0	1	11216000	+		29763	12715	14745	14804	34170	34170					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1990844607353	4	303.199536	1208.76904	-0.63122	-0.00019139	-1.6986	-0.00051502	-2.3298	-0.0007064	303.1990029690568	32.109	0.36208	33.39	33.172	33.534	1.2813					23	12	2	0	0	0	0.847	1	13392	13392		0.96228	0	1	11202000	+		29764	12715	14745	14804	34171	34171					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1981994509697	4	303.199536	1208.76904	-0.66003	-0.00020012	-2.0993	-0.00063651	-2.7594	-0.00083664	303.19880336818323	32.401	0.78024	33.679	33.168	33.949	1.2782					60	26	4	0	0	0	0.84771	1	13540	13540		0.86438	0	1	7402200	+		29765	12715	14745	14804	34172	34172					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1986877322197	4	303.199536	1208.76904	-0.70847	-0.00021481	-1.7482	-0.00053006	-2.4567	-0.00074486	303.1990925715122	32.856	0.69382	34.135	33.887	34.581	1.2782					66	30	4	0	0	0	0.847	1	13735	13735		0.96228	0	1	5954400	+		29766	12715	14745	14804	34173	34173					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1986266970634	4	303.199536	1208.76904	0.10291	3.1202E-05	-1.7948	-0.00054419	-1.6919	-0.00051299	303.1990037599394	29.36	1.4235	31.159	30.267	31.69	1.7987					123	46	4	0	0	0	0.847	1	12332	12332		0.96228	0	1	13215000	+		29767	12715	14745	14804	34174	34174					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1990539431572	4	303.199536	1208.76904	0.14694	4.4551E-05	-1.7074	-0.00051768	-1.5605	-0.00047313	303.19895195926824	30.339	0.86665	32.154	31.676	32.543	1.8151					98	27	4	0	0	0	0.847	1	12824	12824		0.96228	0	1	7320700	+		29768	12715	14745	14804	34175	34175					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1990844607353	4	303.199536	1208.76904	0.17378	5.269E-05	-2.3613	-0.00071593	-2.1875	-0.00066324	303.1987753914413	31.467	0.77247	33.292	33.075	33.848	1.8246					78	28	4	0	0	0	0.82114	4	13214	13137;13214;13254;13295		2.4985	0	1	10885000	+		29769	12715	14745	14804	34176;34177;34178;34179	34177					0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	303.199536	1208.76904	0.48233	0.00014624	-0.84126	-0.00025507	-0.35893	-0.00010883	303.19924622320025	30.991	1.5517	31.282	30.444	31.996	0.29086	0.10535	0.00016087	NaN	0.96228	161	51	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6469700	+		29770	12715	14745	14804							0.1730062910773995
RRRRPSLLR	9	Unmodified	_RRRRPSLLR_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	303.199536	1208.76904	0.17378	5.269E-05	-2.3613	-0.00071593	-2.1875	-0.00066324	303.1987753914413	31.467	0.77247	33.292	33.075	33.848	1.8246	-0.049431	-0.00039896	NaN	2.4985	78	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10885000	+		29771	12715	14745	14804							0.1730062910773995
RRRRPVTS	8	Unmodified	_RRRRPVTS_					0	0	0		nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	nc|ENSG00000182872|P0DW28|RBM10	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2112304568291	3	343.212574	1026.61589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.14	1	106.14	105.64	106.64	0								0	0	0	1.0178	1	45217	45217		0.40072	0.1317	1				29772	7943	14746	14805	34180	34180					0.10365013991281558
RRRRPWARR	9	Unmodified	_RRRRPWARR_					0	0	0			REV__nc|ENSG00000117791|Q969Z3-2|MTARC2	REV__nc|ENSG00000117791|Q969Z3-2|MTARC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2029601931572	4	328.203882	1308.78642	-1.9481	-0.00063939	-0.22135	-7.2648E-05	-2.1695	-0.00071203	328.20360582121924	42.223	1.6218	42.223	41.435	43.057	0					154	51	4	0	0	0	0.8462	1	17642	17642		1.0715	0	1	11871000	+		29773	9508	14747	14806	34181	34181					0.14437969433379294
RRRRQIGKW	9	Unmodified	_RRRRQIGKW_					0	0	0			REV__ENST00000409014.5_1_14:69676187-69676861:+|nuORF	REV__ENST00000409014.5_1_14:69676187-69676861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3843261599541	2	628.383971	1254.75339	1.7095	0.0010742	-1.1342	-0.00071269	0.57534	0.00036154	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.83753	1	33405	33405		1.8442	0	1	7710600	+		29774	8814	14748	14807	34182	34182					0.1362034259068423
RRRRRKQRKVK	11	Unmodified	_RRRRRKQRKVK_					0	0	0		ENSG00000184205|ENST00000375442|TSPYL2	ENSG00000184205|ENST00000375442|TSPYL2	ENSG00000184205|ENST00000375442|TSPYL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	784.0198852419853	2	784.021832	1566.02911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.6	1	102.76	102.26	103.26	0.16445								0	0	0	0.63775	1	43204	43204		0	0	1				29775	4682	14749	14808	34183	34183					0.2687379443852933
RRRRRPLWRV	10	Unmodified	_RRRRRPLWRV_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2531616091728	4	363.482723	1449.90179	-1.2344	-0.00044869	-0.48299	-0.00017556	-1.7174	-0.00062425	363.4826462962053	31.771	0.81194	31.771	31.291	32.103	0					43	25	2	0	0	0	0.12561	1	13421	13421		0.15932	0.064481	1	942130			29776	4217	14750	14809	34184	34184					0.19483073564379083
RRRRRPLWRV	10	Unmodified	_RRRRRPLWRV_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2546569705009	4	363.482723	1449.90179	-0.66538	-0.00024185	0.06391	2.323E-05	-0.60147	-0.00021862	363.73318941433445	54.298	0.38835	54.298	54.087	54.475	0					18	12	2	0	0	0	0.12561	1	22594	22594		0	0	1	923640			29777	4217	14750	14809	34185	34185					0.19483073564379083
RRRRRPLWRV	10	Unmodified	_RRRRRPLWRV_					0	0	0		ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	ENSG00000171873|ENST00000379453|ADRA1D	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2539855837822	4	363.482723	1449.90179	-0.57695	-0.00020971	0.96324	0.00035012	0.38629	0.00014041	363.4836990153318	32.82	0.52763	34.098	33.67	34.198	1.2782					22	17	2	0	0	0	0.12561	1	13767	13767		0.15932	0.064481	1	1228400			29778	4217	14750	14809	34186	34186					0.19483073564379083
RRRRRPPPP	9	Unmodified	_RRRRRPPPP_					0	0	0		ENST00000400000.6_1_18:9914029-9931821:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF;REV__nc|ENSG00000100918|O95072-2|REC8	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	594.3732177615166	2	594.370864	1186.72718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.071	1	43.395	42.895	43.895	0.32389								0	0	0	0.42693	1	18090	18090		0.6015	0	1		+		29779	12715;9014	14751	14810	34187	34187					0.1412807341921507
RRRRRPRRLRI	11	Unmodified	_RRRRRPRRLRI_					0	0	0			REV__nc|ENSG00000114654|Q9HA90|EFCC1	REV__nc|ENSG00000114654|Q9HA90|EFCC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	796.0294067263603	2	796.027449	1590.04034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.344	1	97.629	97.129	98.129	0.28442								0	0	0	0.63775	1	40960	40960		0	0	1		+		29780	9413	14752	14811	34188	34188					0.2689261653270023
RRRRRPRSPLR	11	Unmodified	_RRRRRPRSPLR_					0	0	0			REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	REV__ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	753.4773437380791	2	753.477257	1504.93996	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.002	1	98.093	97.593	98.593	0.090881								0	0	0	0.63775	1	41007	41007		0	0	1		+		29781	12231	14753	14812	34189	34189					0.20768959479050864
RRRRRRALPA	10	Unmodified	_RRRRRRALPA_					0	0	0		SEL1L3-BHLHE41|1|fusion	SEL1L3-BHLHE41|1|fusion	SEL1L3-BHLHE41|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	654.4209472537041	2	654.42142	1306.82829	2.6685	0.0017463	-1.6715	-0.0010938	0.99698	0.00065244	654.4202523628212	105.9	0.12132	105.95	105.88	106	0.05455					10	5	2	0	0	0	0.89803	1	45011	45011		0.45834	0	1	50648000			29782	15949	14754	14813	34190	34190					0.18714525121936276
RRRRRRDP	8	Unmodified	_RRRRRRDP_					0	0	0		ENST00000508982.1_1_5:64859104-64863443:+|nuORF;ENSG00000113593|ENST00000261308|PPWD1	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3583251833916	2	584.355745	1166.69694	2.4547	0.0014344	1.0644	0.00062197	3.5191	0.0020564	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89181	1	31035	31035		0.6015	0	1	7390500			29783	1830	14755	14814	34191	34191					0.12025714754031469
RRRRRRDP	8	Unmodified	_RRRRRRDP_					0	0	0		ENST00000508982.1_1_5:64859104-64863443:+|nuORF;ENSG00000113593|ENST00000261308|PPWD1	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	ENST00000508982.1_1_5:64859104-64863443:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3583251833916	2	584.355745	1166.69694	3.3962	0.0019846	0.55178	0.00032244	3.948	0.002307	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.89181	1	30815	30815		0.6015	0	1	5910500			29784	1830	14755	14814	34192	34192					0.12025714754031469
RRRRRRPFLFF	11	Unmodified	_RRRRRRPFLFF_					0	0	0			REV__ENST00000222747.7_1_7:120497939-120498116:-|nuORF	REV__ENST00000222747.7_1_7:120497939-120498116:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1687499880791	3	536.327043	1605.9593	3.809	0.0020429	2.4853	0.0013329	6.2944	0.0033758	536.3286896725841	90.894	0.44418	92.26	92.027	92.471	1.366					20	13	2	0	0	0	0.14606	1	38248	38248		0	0	1	1049300	+		29785	12084	14756	14815	34193	34193					0.18055915769946296
RRRRRRQRPVS	11	Unmodified	_RRRRRRQRPVS_					0	0	0			REV__CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	REV__CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	761.9747802615166	2	761.972339	1521.93013	2.5161	0.0019172	1.1998	0.00091418	3.7158	0.0028314	761.9724619476932	105.76	0.10841	105.91	105.85	105.96	0.15859					14	5	3	0	0	0	1.0395	1	45128	45128		0.30703	0	1	26323000	+		29786	8204	14757	14816	34194	34194					0.19003771473671804
RRRRRRRKRMR	11	Unmodified	_RRRRRRRKRMR_					0	0	0			REV__ENST00000487093.5_1_3:51575631-51661706:+|nuORF	REV__ENST00000487093.5_1_3:51575631-51661706:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	842.2554199099541	2	842.035282	1682.05601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.19	1	101.39	100.89	101.89	0.19076								0	0	0	0.63775	1	42549	42549		0	0	1		+		29787	13396	14758	14817	34195	34195					0.24226579778087398
RRRRRRRKRRH	11	Unmodified	_RRRRRRRKRRH_					0	0	0			REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	REV__nc|ENSG00000062650|Q7Z5K2-2|WAPL	MSMS	GG20161007_CRH_Patient100_W632_02	4	845.0446044802666	2	845.044496	1688.07444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.446	1	93.772	93.272	94.272	1.3269								0	0	0	0.63775	1	38912	38912		0	0	1		+		29788	14387	14759	14818	34196	34196					0.2579245774431911
RRRRRRRQARP	11	Unmodified	_RRRRRRRQARP_					0	0	0			REV__ENST00000524945.5_1_8:70745220-70745430:-|nuORF	REV__ENST00000524945.5_1_8:70745220-70745430:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	782.4930908083916	2	782.49123	1562.96791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.36	1	112.51	112.01	113.01	0.14912								0	0	0	0.63775	1	48679	48679		0	0	1		+		29789	13654	14760	14819	34197	34197					0.20894282459153146
RRRRRRRRDLL	11	Unmodified	_RRRRRRRRDLL_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1804687380791	4	403.010907	1608.01452	1.9656	0.00079217	4.0176	0.0016191	5.9832	0.0024113	403.263504135888	79.983	0.094597	80.283	80.226	80.321	0.30047					4	2	2	0	0	0	0.14606	1	33435	33435		0	0	1	282670			29790	4732	14761	14820	34198	34198					0.2348372229043889
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.9918090701103	3	521.656445	1561.94751	1.828	0.00095357	0.69611	0.00036313	2.5241	0.0013167	521.6565945065023	42.652	0.63005	43.992	43.764	44.394	1.3399					44	19	3	0	0	0	1.0405	1	17866	17866		0	0	1	4403900			29791	5995	14762	14821	34199	34199					0.18901111799345927
RRRRRRRRHSA	11	Unmodified	_RRRRRRRRHSA_					0	0	0		ENST00000356978.8_1_14:90863393-90866410:+|nuORF;ENST00000447653.7_1_14:90863393-90865345:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.4950439333916	4	391.494153	1561.94751	1.5226	0.00059611	0.63264	0.00024767	2.1553	0.00084378	391.49452146757574	42.232	1.7709	44.153	43.633	45.404	1.9211					232	57	5	0	0	0	1.0405	1	17607	17607		0	0	1	154800000			29792	5995	14762	14821	34200	34200					0.18901111799345927
RRRRRRRRRGF	11	Unmodified	_RRRRRRRRRGF_					0	0	0			REV__ENST00000083182.7_1_17:58603276-58603570:-|nuORF	REV__ENST00000083182.7_1_17:58603276-58603570:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	814.5107299685478	2	814.512497	1627.01044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.85	1	103.03	102.53	103.53	0.18066								0	0	0	0.63775	1	43280	43280		0	0	1		+		29793	12043	14763	14822	34201	34201					0.22201677587349877
RRRRRRRRRQ	10	Unmodified	_RRRRRRRRRQ_					0	0	0		ENST00000405737.2_2_13:41635036-41635183:-|nuORF;ENST00000397992.5_1_16:72984846-73092758:-|nuORF;ENST00000444772.3_1_10:21805118-21806168:-|nuORF	REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF;REV__ENST00000524945.5_1_8:70745220-70745430:-|nuORF	REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1342956423759	5	311.203105	1550.97914	0.046422	1.4447E-05	0.37169	0.00011567	0.41811	0.00013012	311.202977363057	27.852	0.55477	29.627	29.295	29.85	1.7754					18	17	2	0	0	0	0.12561	1	11552	11552		0	0	1	507330	+		29794	14027;13654	14764	14823	34202	34202					0.2256910455328125
RRRRRRRRRRG	11	Unmodified	_RRRRRRRRRRG_					0	0	0		chr3:9950172-9952142|357|12.92|0.43|4.93|-|2|PRRT3,None|1	REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF;REV__nc|ENSG00000177679|A6NNA2|SRRM3;REV__ENST00000083182.7_1_17:58603276-58603570:-|nuORF	REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.2021972537041	5	328.215904	1636.04314	-2.0261	-0.00066501	-2.5938	-0.00085131	-4.6199	-0.0015163	328.4154620819323	40.011	1.0304	40.011	39.7	40.731	0					88	32	4	0	0	0	0.14606	1	16749	16749		0	0	1	5055200	+		29795	13861;11222;12043	14765	14824	34203	34203					0.2505588471021838
RRRRRRRRRRL	11	Unmodified	_RRRRRRRRRRL_					0	0	0		ENST00000373930.3_1_9:123476433-123476640:-|nuORF	REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	847.0635864138603	2	847.060146	1692.10574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.28	1	41.59	41.09	42.09	1.3102								0	0	0	0.63775	1	16895	16895		0	0	1				29796	12701	14766	14825	34204	34204					0.2873703077841583
RRRRRRRRVPE	11	Unmodified	_RRRRRRRRVPE_					0	0	0		ENST00000220562.8_1_8:28559112-28571023:+|nuORF	ENST00000220562.8_1_8:28559112-28571023:+|nuORF	ENST00000220562.8_1_8:28559112-28571023:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	320.0917541384697	5	319.403921	1591.98322	-0.35722	-0.0001141	-1.5764	-0.00050351	-1.9336	-0.0006176	319.4029606052975	29.422	0.091091	30.705	30.643	30.734	1.2825					4	2	2	0	0	0	0.14606	1	12344	12344		0	0	1	102900			29797	5527	14767	14826	34205	34205					0.21091149256312747
RRRRRRRRVVL	11	Unmodified	_RRRRRRRRVVL_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	790.0309326052666	2	790.027449	1578.04034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.39	1	100.6	100.1	101.1	0.20527								0	0	0	0.63775	1	42215	42215		0	0	1		+		29798	12554	14768	14827	34206	34206					0.2744461653271628
RRRRRRRVVLL	11	Unmodified	_RRRRRRRVVLL_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	768.1590453982353	2	768.518925	1535.0233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.63	1	96.051	95.551	96.551	0.4212								0	0	0	0.63775	1	40244	40244		0	0	1		+		29799	12554	14769	14828	34207	34207					0.27718695926910186
RRRRRRSRERR	11	Unmodified	_RRRRRRSRERR_					0	0	0		ENSG00000105298|ENST00000429344|CACTIN;nc|ENSG00000105298|Q8WUQ7-2|CACTIN	ENSG00000105298|ENST00000429344|CACTIN	ENSG00000105298|ENST00000429344|CACTIN	MSMS	GG20161007_CRH_Patient100_W632_01	3	820.5036498904228	2	820.504869	1638.99519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.691	1	95.432	94.932	95.932	0.74124								0	0	0	0.63775	1	39837	39837		0	0	1				29800	1509	14770	14829	34208	34208					0.20124765999480587
RRRRRTKTE	9	Unmodified	_RRRRRTKTE_					0	0	0		ENST00000370544.9_1_1:87794601-87794751:+|nuORF	ENST00000370544.9_1_1:87794601-87794751:+|nuORF	ENST00000370544.9_1_1:87794601-87794751:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2591125369072	3	420.256954	1257.74903	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.49	1	103.67	103.17	104.17	0.18066								0	0	0	0.42693	1	43588	43588		1.0715	0.3738	1				29801	6117	14771	14830	34209	34209					0.13046833377097755
RRRRRVVLLP	10	Unmodified	_RRRRRVVLLP_					0	0	0			REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	REV__ENST00000356978.8_1_14:90863393-90866410:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	660.9448730349541	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.624	1	17.785	17.285	18.285	0.16106								0	0	0	0.66264	1	7314	7314		0	0	1		+		29802	12554	14772	14831	34210	34210					0.2266975058432763
RRRRSRPG	8	Unmodified	_RRRRSRPG_					0	0	0			REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5475036501884	3	347.548068	1039.62238	-1.133	-0.00039376	-0.69156	-0.00024035	-1.8245	-0.00063411	347.5479217223499	45.502	0.69108	45.502	44.902	45.593	0					41	21	2	0	0	0	0.88211	1	19036	19036		7.609	0	1	3476200	+		29803	12496	14773	14832	34211	34211					0.10414951942652806
RRRRSRPG	8	Unmodified	_RRRRSRPG_					0	0	0			REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5468017458916	3	347.548068	1039.62238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.93	1	42.93	42.43	43.43	0								0	0	0	1.0178	1	17969	17969		4.5289	0	1		+		29804	12496	14773	14832	34212	34212					0.10414951942652806
RRRRSRPG	8	Unmodified	_RRRRSRPG_					0	0	0			REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	REV__ENST00000341184.6_1_22:39853353-39853542:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5464965701103	3	347.548068	1039.62238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.046	1	43.046	42.546	43.546	0								0	0	0	1.0178	1	18020	18020		4.5289	0	1		+		29805	12496	14773	14832	34213	34213					0.10414951942652806
RRRRSRRGHRR	11	Unmodified	_RRRRSRRGHRR_					0	0	0			REV__chr19:11441357-11447547|93|50.35|0.01|12.51|+|1|PRKCSH,None|1	REV__chr19:11441357-11447547|93|50.35|0.01|12.51|+|1|PRKCSH,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.2415344119072	4	387.990241	1547.93186	1.5725	0.00061013	0.59875	0.00023231	2.1713	0.00084244	387.99046324832545	38.385	1.6225	38.694	38.424	40.046	0.30857					237	67	5	0	0	0	1.0391	1	16240	16240		0.40827	0.31342	1	17874000	+		29806	8282	14774	14833	34214	34214					0.17980825282256774
RRRRSRRGHRR	11	Unmodified	_RRRRSRRGHRR_					0	0	0			REV__chr19:11441357-11447547|93|50.35|0.01|12.51|+|1|PRKCSH,None|1	REV__chr19:11441357-11447547|93|50.35|0.01|12.51|+|1|PRKCSH,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2404968142509	4	387.990241	1547.93186	0.56159	0.00021789	0.52429	0.00020342	1.0859	0.00042131	387.9905208889514	35.839	0.69927	37.657	37.419	38.118	1.8176					134	42	4	0	0	0	1.0388	4	15207	15076;15117;15159;15207		0.50596	0.31342	1	18143000	+		29807	8282	14774	14833	34215;34216;34217;34218	34218					0.17980825282256774
RRRRSRRRGHR	11	Unmodified	_RRRRSRRRGHR_					0	0	0			REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.2414123415947	4	387.990241	1547.93186	1.5725	0.00061013	0.59875	0.00023231	2.1713	0.00084244	387.99046324832545	38.385	1.6225	38.694	38.424	40.046	0.30857					237	67	5	0	0	0	1.0391	1	16168	16168		0.40827	0	1	17874000	+		29808	12049	14775	14834	34219	34219					0.17980825282256774
RRRRSRRRGHR	11	Unmodified	_RRRRSRRRGHR_					0	0	0			REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	387.990241	1547.93186	1.5725	0.00061013	0.59875	0.00023231	2.1713	0.00084244	387.99046324832545	38.385	1.6225	38.694	38.424	40.046	0.30857	0.18959	0.00029562	NaN	0.40827	237	67	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17874000	+		29809	12049	14775	14834							0.17980825282256774
RRRRSRRRGHR	11	Unmodified	_RRRRSRRRGHR_					0	0	0			REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	REV__ENST00000181839.8_1_7:39990221-39990641:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	387.990241	1547.93186	0.5485	0.00021281	-0.6289	-0.00024401	-0.080393	-3.1192E-05	387.9899209257116	36.607	0.095139	38.425	38.401	38.496	1.8176	-0.079378	-0.0016096	NaN	0.40827	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9447600	+		29810	12049	14775	14834							0.17980825282256774
RRRRSSRRRHR	11	Unmodified	_RRRRSSRRRHR_					0	0	0			REV__ENST00000605386.1_1_12:90102939-90103125:+|nuORF	REV__ENST00000605386.1_1_12:90102939-90103125:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.1758300662041	5	316.595761	1577.94242	0.59728	0.0001891	2.4758	0.00078382	3.0731	0.00097292	316.596449748227	42.379	0.16182	43.719	43.602	43.764	1.3399					7	4	2	0	0	0	0.14606	1	17737	17737		0	0	1	144730	+		29811	14134	14776	14835	34220	34220					0.17656807936714358
RRRRTPSS	8	Unmodified	_RRRRTPSS_					0	0	0		nc|ENSG00000116754|Q05519-2|SRSF11;ENSG00000116754|ENST00000370949|SRSF11;ENST00000463859.5_1_1:70703183-70712812:+|nuORF	nc|ENSG00000116754|Q05519-2|SRSF11	nc|ENSG00000116754|Q05519-2|SRSF11	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2010986208916	3	339.200446	1014.57951	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.426	1	37.426	36.926	37.926	0								0	0	0	1.0178	1	15689	15689		0.40072	0	1				29812	1987	14777	14836	34221	34221					0.07280137094574002
RRRRVRGPL	9	Unmodified	_RRRRVRGPL_					0	0	0		chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3781616091728	2	583.378689	1164.74283	1.0831	0.00063186	-1.384	-0.00080742	-0.30095	-0.00017557	583.3776709155061	31.262	0.3347	31.553	31.418	31.753	0.29086					20	10	2	0	0	0	0.85206	1	13129	13129		0.6015	0.076735	1	1113100			29813	249	14778	14837	34222	34222					0.16704359936284163
RRRRVRGPL	9	Unmodified	_RRRRVRGPL_					0	0	0		chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	583.378689	1164.74283	1.0831	0.00063186	-1.384	-0.00080742	-0.30095	-0.00017557	583.3776709155061	31.262	0.3347	31.553	31.418	31.753	0.29086	0.16719	-0.00035524	NaN	0.6015	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1113100			29814	249	14778	14837							0.16704359936284163
RRRRVRGPL	9	Unmodified	_RRRRVRGPL_					0	0	0		chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	chr20:62387370-62387611|215|15.17|0.19|6.32|+|0|None,RPS21|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	583.378689	1164.74283	0.78521	0.00045808	-0.69743	-0.00040686	0.087786	5.1212E-05	583.3779982606503	29.936	0.21316	31.218	31.134	31.348	1.2825	-0.16719	0.00044588	NaN	0.6015	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	360270			29815	249	14778	14837							0.16704359936284163
RRRSERKVTR	10	Unmodified	_RRRSERKVTR_					0	0	0		ENSG00000162009|ENST00000689027|SSTR5	ENSG00000162009|ENST00000689027|SSTR5	ENSG00000162009|ENST00000689027|SSTR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.6090576052666	3	448.607875	1342.8018	2.9067	0.001304	0.3212	0.00014409	3.2279	0.001448	448.6079427881507	83.497	1.3326	83.768	83.306	84.639	0.27029					88	42	3	0	0	0	0.89803	1	35069	35069		0.62683	0	1	1862300			29816	3603	14779	14838	34223	34223					0.14410791439922832
RRRSERKVTR	10	Unmodified	_RRRSERKVTR_					0	0	0		ENSG00000162009|ENST00000689027|SSTR5	ENSG00000162009|ENST00000689027|SSTR5	ENSG00000162009|ENST00000689027|SSTR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.6097595095634	3	448.607875	1342.8018	3.7346	0.0016754	0.57025	0.00025582	4.3048	0.0019312	448.60798492034576	82.651	0.8831	83.863	83.068	83.951	1.2125					43	27	3	0	0	0	0.89803	1	34522	34522		0.62683	0.21856	1	1927900			29817	3603	14779	14838	34224	34224					0.14410791439922832
RRRSIFEYHRI	11	Unmodified	_RRRSIFEYHRI_					0	0	0		ENST00000461225.5_1_17:37235749-37309234:-|nuORF;nc|ENSG00000161381|Q8IUK5-3|PLXDC1;ENST00000493200.5_1_17:37235696-37288242:-|nuORF;ENST00000578517.5_1_17:37235696-37309234:-|nuORF;nc|ENSG00000161381|Q8IUK5-2|PLXDC1;ENST00000394318.7_1_17:37235696-37307690:-|nuORF;nc|ENSG00000161381|Q8IUK5-4|PLXDC1;ENSG00000161381|ENST00000315392|PLXDC1	ENST00000461225.5_1_17:37235749-37309234:-|nuORF	ENST00000461225.5_1_17:37235749-37309234:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	511.6240112185478	3	511.623414	1531.84841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.132	1	46.461	45.961	46.961	0.32899								0	0	0	0.63775	1	19360	19360		0.094841	0	1				29818	3595	14780	14839	34225	34225					0.10376231271243341
RRRSLRFREWI	11	Unmodified	_RRRSLRFREWI_					0	0	0			REV__ENSG00000225968|ENST00000424383|ELFN1	REV__ENSG00000225968|ENST00000424383|ELFN1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	525.3277465701103	3	525.642809	1573.9066	2.828	0.0014865	1.982	0.0010418	4.81	0.0025283	525.6437806649609	91.784	0.70901	91.974	91.627	92.336	0.19042					29	21	2	0	0	0	0.14606	1	38402	38402		0	0	1	345390	+		29819	11893	14781	14840	34226	34226					0.14259912916486428
RRRTTRTKERR	11	Unmodified	_RRRTTRTKERR_					0	0	0			REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3093749880791	3	505.973217	1514.89782	3.0891	0.001563	-0.039642	-2.0058E-05	3.0494	0.0015429	505.973345551384	98.263	0.11427	98.354	98.286	98.401	0.090881					10	3	4	0	0	0	1.0405	1	41108	41108		0	0	1	25558000	+		29820	10889	14782	14841	34227	34227					0.16096939280009792
RRRVLLRRPV	10	Unmodified	_RRRVLLRRPV_					0	0	0		ENST00000528318.5_1_8:42716773-42751856:-|nuORF;ENST00000526349.5_1_8:42729111-42751823:-|nuORF;ENST00000534961.5_1_8:42742976-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	ENST00000528318.5_1_8:42716773-42751856:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9467651247978	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.962	1	82.962	82.462	83.462	0								0	0	0	0.66237	1	34565	34565		0.45834	0	1				29821	7146	14783	14842	34228	34228					0.22669750584304893
RRRVRKHLAHF	11	Unmodified	_RRRVRKHLAHF_					0	0	0			REV__ENST00000561334.1_1_15:64443974-64444822:+|nuORF	REV__ENST00000561334.1_1_15:64443974-64444822:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.6369811892509	3	492.635877	1474.8858	5.4324	0.0026762	-2.5815	-0.0012717	2.8509	0.0014045	492.6344348167474	88.124	1.4719	89.181	88.639	90.111	1.0562					103	45	4	0	0	0	1.0393	1	37148	37148		0.094841	0.011491	1	2320000	+		29822	13900	14784	14843	34229	34229					0.16735367327487438
RRRVRRRKFRP	11	Unmodified	_RRRVRRRKFRP_					0	0	0			REV__nc|ENSG00000203880|Q9NV79-3|PCMTD2	REV__nc|ENSG00000203880|Q9NV79-3|PCMTD2	MSMS	GG20161007_CRH_Patient100_W632_02	4	792.0087768435478	2	792.008725	1582.0029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.18	1	102.37	101.87	102.87	0.19076								0	0	0	0.63775	1	42971	42971		0	0	1		+		29823	11766	14785	14844	34230	34230					0.23517525267084238
RRRVSRKFF	9	Unmodified	_RRRVSRKFF_					0	0	0			REV__nc|ENSG00000278570|Q9Y5X4-2|NR2E3	REV__nc|ENSG00000278570|Q9Y5X4-2|NR2E3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6926452517509	4	313.694087	1250.74724	-2.7068	-0.00084912	-1.6566	-0.00051966	-4.3634	-0.0013688	313.69353164398336	30.668	0.64194	30.668	30.254	30.896	0					84	20	5	0	0	0	0.847	1	12757	12757		0.96228	0.0979	1	22347000	+		29824	12024	14786	14845	34231	34231					0.1318982435916496
RRRWRRRPG	9	Unmodified	_RRRWRRRPG_					0	0	0			REV__ENST00000442267.2_1_4:141622749-141677260:-|nuORF	REV__ENST00000442267.2_1_4:141622749-141677260:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	432.5973693728447	3	432.597534	1294.77077	1.0161	0.00043957	-0.87678	-0.00037929	0.13932	6.0271E-05	432.59715121299723	95.936	0.31647	95.936	95.746	96.063	0					33	10	4	0	0	0	0.8462	1	40123	40123		1.0715	0.3738	1	39971000	+		29825	13091	14787	14846	34232	34232					0.13517682916335616
RRRWRRRPG	9	Unmodified	_RRRWRRRPG_					0	0	0			REV__ENST00000442267.2_1_4:141622749-141677260:-|nuORF	REV__ENST00000442267.2_1_4:141622749-141677260:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	432.5977355837822	3	432.597534	1294.77077	3.0952	0.001339	-1.8612	-0.00080517	1.2339	0.0005338	432.5967724242847	95.849	0.30999	95.972	95.801	96.111	0.12331					31	10	4	0	0	0	0.8462	1	40118	40118		1.0715	0.3738	1	35503000	+		29826	13091	14787	14846	34233	34233					0.13517682916335616
RRRWRRRRPSL	11	Unmodified	_RRRWRRRRPSL_					0	0	0			REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	REV__ENST00000375344.7_1_9:97136898-97137102:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	398.9984008669853	4	399.498904	1593.96651	1.7235	0.00068852	0.4353	0.0001739	2.1588	0.00086242	399.4989798083889	39.398	0.64702	39.711	39.489	40.136	0.31262					36	20	2	0	0	0	0.14606	1	16555	16555		0.08335	0	1	1272000	+		29827	12715	14788	14847	34234	34234					0.19328648370378687
RRSFKTWWQKK	11	Unmodified	_RRSFKTWWQKK_					0	0	0		ENSG00000179532|ENST00000254579|DNHD1;ENST00000534210.6_1_11:6559916-6579528:+|nuORF	ENSG00000179532|ENST00000254579|DNHD1	ENSG00000179532|ENST00000254579|DNHD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6253539919853	3	517.628276	1549.863	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.25	1	114.29	113.79	114.79	0.042839								0	0	0	0.63775	1	49185	49185		0.32927	0.23443	1				29828	4518	14789	14848	34235	34235					0.11006303419344476
RRSFRNKFAK	10	Unmodified	_RRSFRNKFAK_					0	0	0			REV__ENSG00000011007|ENST00000613537|ELOA	REV__ENSG00000011007|ENST00000613537|ELOA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	655.3840209841728	2	655.383637	1308.75272	2.2644	0.001484	-1.364	-0.00089397	0.90032	0.00059005	655.3824177491845	83.357	2.4268	83.627	82.756	85.183	0.27029					216	77	5	0	0	0	0.88278	1	35222	35222		6.2058	0	1	5228000	+		29829	8530	14790	14849	34236	34236					0.11069503150974924
RRSFTHPRSGP	11	Unmodified	_RRSFTHPRSGP_					0	0	0			REV__ENST00000504424.1_1_5:141392338-141392542:-|nuORF	REV__ENST00000504424.1_1_5:141392338-141392542:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2354919314384	3	433.233927	1296.67995	2.2864	0.00099055	0.51084	0.00022131	2.7972	0.0012119	433.23406205528755	40.981	6.4739	42.306	41.623	48.097	1.3254					333	206	4	0	0	0	0.94496	1	18593	18593		3.5927	0	1	9219400	+		29830	13525	14791	14850	34237	34237					0.04347749357543762
RRSGPLLAGLR	11	Unmodified	_RRSGPLLAGLR_					0	0	0			REV__ENST00000350498.7_1_7:99006166-99006442:-|nuORF	REV__ENST00000350498.7_1_7:99006166-99006442:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2498046755791	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.459	1	15.356	14.856	15.856	0.89664								0	0	0	0.63775	1	6000	6000		2.2527	0.16672	1		+		29831	12531	14792	14851	34238	34238					0.14134698402426693
RRSKFKIA	8	Unmodified	_RRSKFKIA_					0	0	0		ENST00000422748.5_2_7:134653379-134653538:+|nuORF	ENST00000422748.5_2_7:134653379-134653538:+|nuORF	ENST00000422748.5_2_7:134653379-134653538:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	503.3240844607353	2	503.319443	1004.62433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.59	1	104.65	104.15	105.15	0.056801								0	0	0	1.0178	1	44146	44146		0.79363	0	1				29832	6452	14793	14852	34239	34239					0.12220567907900204
RRSKSPHKKR	10	Unmodified	_RRSKSPHKKR_					0	0	0		nc|ENSG00000153914|Q8WXA9|SREK1;ENSG00000153914|ENST00000334121|SREK1;ERBB2IP-SREK1|2|fusion;ERBB2IP-SREK1|1|fusion	nc|ENSG00000153914|Q8WXA9|SREK1	nc|ENSG00000153914|Q8WXA9|SREK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7012512087822	4	320.700906	1278.77452	1.1113	0.00035641	-0.7402	-0.00023738	0.37115	0.00011903	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	0.89803	1	17607	17607		1.5923	0.26264	1	296590000			29833	3369	14794	14853	34240	34240					0.14628307899556603
RRSKSPHKKR	10	Unmodified	_RRSKSPHKKR_					0	0	0		nc|ENSG00000153914|Q8WXA9|SREK1;ENSG00000153914|ENST00000334121|SREK1;ERBB2IP-SREK1|2|fusion;ERBB2IP-SREK1|1|fusion	nc|ENSG00000153914|Q8WXA9|SREK1	nc|ENSG00000153914|Q8WXA9|SREK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7001830935478	4	320.700906	1278.77452	1.0696	0.00034303	-1.7637	-0.00056561	-0.69404	-0.00022258	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	0.89803	1	16718	16718		1.5923	0.48253	1	367210000			29834	3369	14794	14853	34241	34241					0.14628307899556603
RRSLMGPFPR	10	Unmodified	_RRSLMGPFPR_					0	0	0		ENST00000595531.5_1_2:105883140-105883392:-|nuORF	ENST00000595531.5_1_2:105883140-105883392:-|nuORF	ENST00000595531.5_1_2:105883140-105883392:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2278320193291	3	406.229237	1215.66588	-0.38796	-0.0001576	-1.408	-0.00057198	-1.796	-0.00072958	406.2284334089685	23.186	0.69724	23.186	22.928	23.625	0					37	22	3	0	0	0	0.78005	1	9658	9658		12.856	0	1	946000			29835	7514	14795	14854	34242	34242					0.06667380604903883
RRSMKRRRRRR	11	Unmodified	_RRSMKRRRRRR_					0	0	0		nc|ENSG00000253276|Q8N9Z2-2|CCDC71L;ENSG00000253276|ENST00000523505|CCDC71L	nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	nc|ENSG00000253276|Q8N9Z2-2|CCDC71L	MSMS	GG20161007_CRH_Patient100_W632_02	4	807.6900512576103	2	807.500741	1612.98693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.596	1	95.998	95.498	96.498	0.40208								0	0	0	0.63775	1	40222	40222		0	0	1				29836	8008	14796	14855	34243	34243					0.20495495758541438
RRSRKWRGLYH	11	Unmodified	_RRSRKWRGLYH_					0	0	0		ENST00000403909.2_1_6:139660476-139660551:+|nuORF	ENST00000403909.2_1_6:139660476-139660551:+|nuORF	ENST00000403909.2_1_6:139660476-139660551:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	758.4364501833916	2	757.931817	1513.84908	2.8271	0.0021428	0.69873	0.00052959	3.5258	0.0026724	758.4345339218589	85.186	1.3382	86.782	86.401	87.739	1.5962					335	54	7	0	0	0	1.0395	1	36134	36134		0.30703	0.03801	1	469330000			29837	6355	14797	14856	34244	34244					0.11271070710927233
RRSRLQRRQ	9	Unmodified	_RRSRLQRRQ_					0	0	0		nc|ENSG00000172830|Q8TE77-2|SSH3;ENSG00000172830|ENST00000308127|SSH3;SSH3|p.S286Vfs*74|1|0.3|ENSG00000172830|chr11:67307910-67307910|A/-|frameshift_variant;nc|ENSG00000172830|Q8TE77-4|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3843261599541	2	628.38196	1254.74937	2.0785	0.0013061	1.0343	0.00064995	3.1129	0.0019561	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.83753	1	32977	32977		1.8442	0	1	6184900			29838	4255	14798	14857	34245	34245					0.1321825309698852
RRSRLQRRQ	9	Unmodified	_RRSRLQRRQ_					0	0	0		nc|ENSG00000172830|Q8TE77-2|SSH3;ENSG00000172830|ENST00000308127|SSH3;SSH3|p.S286Vfs*74|1|0.3|ENSG00000172830|chr11:67307910-67307910|A/-|frameshift_variant;nc|ENSG00000172830|Q8TE77-4|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	nc|ENSG00000172830|Q8TE77-2|SSH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3837158083916	2	628.38196	1254.74937	2.3591	0.0014824	1.0037	0.00063074	3.3628	0.0021131	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.83753	1	32922	32922		1.8442	0	1	7119900			29839	4255	14798	14857	34246	34246					0.1321825309698852
RRSRRRGP	8	Unmodified	_RRSRRRGP_					0	0	0		ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5471374392509	3	347.548068	1039.62238	-1.1122	-0.00038653	-0.89974	-0.0003127	-2.0119	-0.00069923	347.54777397598724	45.837	0.41669	45.837	45.593	46.01	0					27	12	3	0	0	0	0.88577	2	19128	19128;19178		5.2969	0.39987	1	3250800			29840	5807	14799	14858	34247;34248	34247					0.10414951942652806
RRSRRRGP	8	Unmodified	_RRSRRRGP_					0	0	0		ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5471679568291	3	347.548068	1039.62238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.451	1	43.451	42.951	43.951	0								0	0	0	1.0178	1	18190	18190		5.2969	0.39987	1				29841	5807	14799	14858	34249	34249					0.10414951942652806
RRSRRRGP	8	Unmodified	_RRSRRRGP_					0	0	0		ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.5474426150322	3	347.548068	1039.62238	1.3694	0.00047593	-2.1018	-0.00073047	-0.73238	-0.00025454	347.54710104794583	45.157	0.44307	45.484	45.25	45.693	0.32674					37	14	3	0	0	0	0.88577	1	18989	18989		5.2969	0.39987	1	3036800			29842	5807	14799	14858	34250	34250					0.10414951942652806
RRSRRRGP	8	Unmodified	_RRSRRRGP_					0	0	0		ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5475952029228	3	347.548068	1039.62238	0.67666	0.00023517	-1.3917	-0.00048367	-0.71499	-0.00024849	347.5474015915191	43.64	0.39661	44.993	44.735	45.132	1.3536					36	12	4	0	0	0	0.88983	1	18216	18216		2.7352	0.23671	1	4137600			29843	5807	14799	14858	34251	34251					0.10414951942652806
RRSRRRGP	8	Unmodified	_RRSRRRGP_					0	0	0		ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	ENST00000311806.7_1_3:38207121-38207184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5470458865166	3	347.548068	1039.62238	1.3457	0.0004677	-1.684	-0.00058528	-0.33833	-0.00011758	347.5477493687869	41.69	0.62015	43.582	43.269	43.889	1.8927					36	19	2	0	0	0	0.88577	1	17559	17559		5.2969	0.39987	1	2826600			29844	5807	14799	14858	34252	34252					0.10414951942652806
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.5785400271416	4	373.984358	1491.90833	-0.85461	-0.00031961	1.1735	0.00043888	0.31893	0.00011927	373.98438438282983	33.6	0.4627	33.6	33.359	33.822	0					31	14	3	0	0	0	0.14606	1	14068	14068		0.29564	0.21229	1	773000	+		29845	11111	14800	14859	34253	34253					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.3118163943291	3	498.310052	1491.90833	3.2244	0.0016068	0.16561	8.2525E-05	3.39	0.0016893	498.30969825803487	88.797	1.0188	89.021	88.436	89.454	0.22359					69	31	3	0	0	0	1.0405	1	37057	37057		0	0	1	1835800	+		29846	11111	14800	14859	34254	34254					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1004211306572	4	373.984358	1491.90833	1.0175	0.00038054	0.049332	1.8449E-05	1.0669	0.00039899	374.23498120145825	30.639	0.35124	30.925	30.735	31.087	0.2859					18	11	2	0	0	0	0.14606	1	12871	12871		0	0	1	747760	+		29847	11111	14800	14859	34255	34255					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.5789367556572	4	373.984358	1491.90833	1.096	0.00040989	0.35265	0.00013189	1.4487	0.00054178	373.9846043581667	32.107	0.56009	32.402	32.06	32.621	0.29431					44	17	3	0	0	0	0.14606	1	13526	13526		0.36667	0.28332	1	1281700	+		29848	11111	14800	14859	34256	34256					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1010009646416	4	373.984358	1491.90833	1.0361	0.00038748	0.58638	0.0002193	1.6225	0.00060677	373.984453549196	30.972	0.38857	31.263	31.061	31.449	0.29086					24	12	3	0	0	0	0.14606	1	13052	13052		0	0	1	834670	+		29849	11111	14800	14859	34257	34257					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.5787231326103	4	373.984358	1491.90833	-0.16286	-6.0906E-05	1.5365	0.00057463	1.3737	0.00051373	374.2355064216369	31.003	0.62773	32.284	31.841	32.469	1.2813					42	19	3	0	0	0	0.14606	1	13031	13031		0.36667	0	1	808540	+		29850	11111	14800	14859	34258	34258					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	374.5788452029228	4	373.984358	1491.90833	0.52609	0.00019675	0.11302	4.2269E-05	0.63911	0.00023902	373.98405017046673	30.432	0.6519	32.247	31.8	32.452	1.8151					35	20	3	0	0	0	0.14606	1	12752	12752		0.32927	0.32927	1	997370	+		29851	11111	14800	14859	34259	34259					0.18204966725102167
RRSRRRPRPQK	11	Unmodified	_RRSRRRPRPQK_					0	0	0			REV__ENSG00000173848|ENST00000355029|NET1	REV__ENSG00000173848|ENST00000355029|NET1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	373.984358	1491.90833	-0.035442	-1.3255E-05	0.26203	9.7997E-05	0.22659	8.4742E-05	373.9845487458223	29.709	0.30727	30.992	30.856	31.164	1.2825	0.1176	-0.00030632	NaN	0	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	962040	+		29852	11111	14800	14859							0.18204966725102167
RRSRSLARPKP	11	Unmodified	_RRSRSLARPKP_					0	0	0			REV__nc|ENSG00000087460|P84996|GNAS	REV__nc|ENSG00000087460|P84996|GNAS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.7067138552666	4	331.70746	1322.80073	0.52186	0.0001731	-2.0771	-0.00068899	-1.5552	-0.00051588	331.706939731743	42.568	1.0745	43.908	43.35	44.425	1.3399					107	33	4	0	0	0	0.9945	1	17845	17845		4.1166	1.2733	1	5060600	+		29853	14398	14801	14860	34260	34260					0.15224577071035128
RRSRSLARPKP	11	Unmodified	_RRSRSLARPKP_					0	0	0			REV__nc|ENSG00000087460|P84996|GNAS	REV__nc|ENSG00000087460|P84996|GNAS	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	331.70746	1322.80073	1.1998	0.00039797	-2.7093	-0.00089868	-1.5095	-0.00050072	331.7067022990126	43.409	0.78379	43.733	43.176	43.96	0.32389	-0.088506	-9.4474E-05	NaN	4.1166	73	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3414800	+		29854	14398	14801	14860							0.15224577071035128
RRSRSLARPKP	11	Unmodified	_RRSRSLARPKP_					0	0	0			REV__nc|ENSG00000087460|P84996|GNAS	REV__nc|ENSG00000087460|P84996|GNAS	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	331.70746	1322.80073	0.52186	0.0001731	-2.0771	-0.00068899	-1.5552	-0.00051588	331.706939731743	42.568	1.0745	43.908	43.35	44.425	1.3399	0.086054	0.00074431	NaN	4.1166	107	33	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5060600	+		29855	14398	14801	14860							0.15224577071035128
RRSRWLRHLLR	11	Unmodified	_RRSRWLRHLLR_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	387.9914733767509	4	387.991918	1547.93856	-0.21161	-8.2104E-05	-1.2659	-0.00049114	-1.4775	-0.00057325	387.991382208045	39.596	0.71149	39.596	39.235	39.947	0					87	22	5	0	0	0	1.0375	2	16635	16635;16684		0.92553	0.55886	1	14055000	+		29856	12790	14802	14861	34261;34262	34261					0.18651325390305828
RRSRWLRHLLR	11	Unmodified	_RRSRWLRHLLR_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1346008181572	5	310.594989	1547.93856	-2.2524	-0.00069958	0.17621	5.4729E-05	-2.0762	-0.00064485	310.59493822125313	41.983	0.34382	41.983	41.853	42.197	0					16	10	3	0	0	0	0.14606	1	17527	17527		0	0	1	383380	+		29857	12790	14802	14861	34263	34263					0.18651325390305828
RRSRWLRHLLR	11	Unmodified	_RRSRWLRHLLR_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2410766482353	4	387.991918	1547.93856	-0.4465	-0.00017324	-2.4112	-0.00093551	-2.8577	-0.0011088	388.24137773707247	36.408	0.7895	37.684	37.456	38.246	1.2762					126	43	5	0	0	0	1.0375	3	15392	15297;15338;15392		0.92553	0.51727	1	17055000	+		29858	12790	14802	14861	34264;34265;34266	34266					0.18651325390305828
RRSRWLRHLLR	11	Unmodified	_RRSRWLRHLLR_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.9912902712822	4	387.991918	1547.93856	-0.24158	-9.3731E-05	-3.2269	-0.001252	-3.4685	-0.0013457	387.99080029063776	37.11	0.33751	38.394	38.254	38.591	1.284					64	29	3	0	0	0	1.0394	1	15616	15616		0.32927	0.24592	1	10964000	+		29859	12790	14802	14861	34267	34267					0.18651325390305828
RRSRWLRHLLR	11	Unmodified	_RRSRWLRHLLR_					0	0	0			REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	REV__ENST00000389561.6_1_12:132551999-132562003:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	387.991918	1547.93856	0.56159	0.00021789	-3.798	-0.0014736	-3.2364	-0.0012557	387.9905208889514	35.839	0.69927	37.657	37.419	38.118	1.8176	-0.013689	-0.0011	NaN	0.92553	134	42	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18143000	+		29860	12790	14802	14861							0.18651325390305828
RRSTGPVP	8	Unmodified	_RRSTGPVP_					0	0	0			REV__ENSG00000080224|ENST00000389672|EPHA6	REV__ENSG00000080224|ENST00000389672|EPHA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2522460818291	2	435.251226	868.487899	3.6811	0.0016022	0.035646	1.5515E-05	3.7168	0.0016177	435.2512494731229	73.865	0.84669	75.183	74.623	75.469	1.318					50	26	3	0	0	0	0.88958	1	30975	30975		2.8892	0	1	3735500	+		29861	8805	14803	14862	34268	34268					0.04839453677391248
RRSTISIL	8	Unmodified	_RRSTISIL_					0	0	0			REV__tr|A0A553SF87|A0A553SF87_NIACITautomerasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_08430PE=4SV=1	REV__tr|A0A553SF87|A0A553SF87_NIACITautomerasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_08430PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	316.0602294802666	3	315.866181	944.576714	1.0398	0.00032845	1.0307	0.00032556	2.0705	0.00065401	315.86665033544233	47.327	0.91881	48.71	48.378	49.297	1.3825					52	28	2	0	0	0	2.3239	1	20034	20034		0.45834	0	1	1884800	+		29862	14694	14804	14863	34269	34269					0.10220868917065218
RRSTLRVI	8	Unmodified	_RRSTLRVI_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1000.642749011517	1	1000.63742	999.630147	3.8356	0.0038381	1.5883	0.0015893	5.424	0.0054274	1000.6387925501574	109	0.20057	109.16	109.05	109.25	0.15898					23	9	3	0	0	0	0.89176	1	47286	47286		0.79363	0	1	47265000			29863	6135	14805	14864	34270	34270					0.1303166641957887
RRSTLRVI	8	Unmodified	_RRSTLRVI_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1000.64073485136	1	1000.63742	999.630147	3.558	0.0035603	1.7022	0.0017032	5.2602	0.0052636	1000.6390221974174	108.99	0.20507	109.14	109.01	109.22	0.1548					28	9	4	0	0	0	0.89176	2	47130	47130;47191		0.79363	0	1	36619000			29864	6135	14805	14864	34271;34272	34271					0.1303166641957887
RRSTLRVI	8	Unmodified	_RRSTLRVI_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1000.63742	999.630147	1.2213	0.0012221	3.3952	0.0033973	4.6165	0.0046194	1000.6397938896115	109.03	0.14916	109.03	108.96	109.11	0	-0.066156	0.0014302	NaN	0.79363	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3713600			29865	6135	14805	14864							0.1303166641957887
RRSTLRVI	8	Unmodified	_RRSTLRVI_					0	0	0		ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	ENST00000372070.7_1_1:46016515-46016749:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1000.63742	999.630147	2.9639	0.0029658	3.1932	0.0031952	6.1571	0.006161	1000.6407790337632	109	0.13519	109.05	109	109.13	0.050644	-0.044767	0.0012281	NaN	0.79363	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5658700			29866	6135	14805	14864							0.1303166641957887
RRTFLYWHIFL	11	Unmodified	_RRTFLYWHIFL_					0	0	0		ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	ZRANB1|p.I510Pfs*35|1|0.06|ENSG00000019995|chr10:124981808-124981809|-/CCACATGGGCTGAAGCC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.2935058474541	3	517.957623	1550.85104	2.7283	0.0014131	1.8526	0.00095959	4.581	0.0023727	517.9583916435239	74.608	1.5443	74.933	74.105	75.649	0.32464					66	48	2	0	0	0	0.14606	1	31011	31011		1.4551	0.94916	1	863790			29867	17372	14806	14865	34273	34273					0.09764686676180645
RRTLRQRRR	9	Unmodified	_RRTLRQRRR_					0	0	0		ENST00000360342.7_1_20:3148478-3154166:-|nuORF	ENST00000360342.7_1_20:3148478-3154166:-|nuORF	ENST00000360342.7_1_20:3148478-3154166:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	649.4137451052666	2	649.411052	1296.80755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.85	1	106.85	106.35	107.35	0								0	0	0	0.42693	1	45675	45675		0.52476	0	1				29868	6028	14807	14866	34274	34274					0.17101934742254343
RRTRRNHRRKR	11	Unmodified	_RRTRRNHRRKR_					0	0	0		ENST00000556034.1_1_15:22567057-22567180:+|nuORF	ENST00000556034.1_1_15:22567057-22567180:+|nuORF	ENST00000556034.1_1_15:22567057-22567180:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	796.4883911013603	2	796.488688	1590.96282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.297	1	94.169	93.669	94.669	0.87176								0	0	0	0.63775	1	39266	39266		0	0	1				29869	7302	14808	14867	34275	34275					0.1909797859648279
RRTVRGVALLP	11	Unmodified	_RRTVRGVALLP_					0	0	0			REV__ENST00000528796.5_1_11:3400300-3400357:-|nuORF	REV__ENST00000528796.5_1_11:3400300-3400357:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2662536501884	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.101	1	82.101	81.601	82.601	0								0	0	0	0.63775	1	34201	34201		0.50596	0.34663	1		+		29870	13686	14809	14868	34276	34276					0.16895557953557727
RRTVRGVALLP	11	Unmodified	_RRTVRGVALLP_					0	0	0			REV__ENST00000528796.5_1_11:3400300-3400357:-|nuORF	REV__ENST00000528796.5_1_11:3400300-3400357:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2668640017509	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.013	1	17.91	17.41	18.41	0.89794								0	0	0	0.63775	1	7082	7082		0.40827	0.24894	1		+		29871	13686	14809	14868	34277	34277					0.16895557953557727
RRVHRFRLRQL	11	Unmodified	_RRVHRFRLRQL_					0	0	0			REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	513.3615600466728	3	512.986798	1535.93856	5.0456	0.0025883	-0.12966	-6.6512E-05	4.9159	0.0025218	512.9865691616754	87.325	0.33986	88.82	88.611	88.951	1.4953					14	10	2	0	0	0	0.14606	1	36793	36793		0.094841	0	1	526040	+		29872	12414	14810	14869	34278	34278					0.19203325390299142
RRVHRFRLRQL	11	Unmodified	_RRVHRFRLRQL_					0	0	0			REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	512.986798	1535.93856	2.7558	0.0014137	-1.2284	-0.00063017	1.5274	0.00078353	512.9857664739576	88.228	0.24451	88.463	88.354	88.598	0.23471	-0.17858	-0.0010096	NaN	0.094841	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395550	+		29873	12414	14810	14869							0.19203325390299142
RRVKKGTK	8	Unmodified	_RRVKKGTK_					0	0	0		ENST00000336095.10_1_20:3914180-3914489:-|nuORF	ENST00000336095.10_1_20:3914180-3914489:-|nuORF	ENST00000336095.10_1_20:3914180-3914489:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.6481201052666	1	972.642508	971.635232	2.9166	0.0028368	1.926	0.0018733	4.8426	0.0047101	972.644201004923	106.12	0.15733	106.27	106.18	106.33	0.15781					27	8	4	0	0	0	0.89176	1	45336	45336		0.79363	0	1	328710000			29874	5914	14811	14870	34279	34279					0.14827970282192382
RRVKPYII	8	Unmodified	_RRVKPYII_					0	0	0		ENSG00000163877|ENST00000296215|SNIP1	ENSG00000163877|ENST00000296215|SNIP1	ENSG00000163877|ENST00000296215|SNIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.3690673708916	2	522.837468	1043.66038	3.2571	0.0017029	-1.8995	-0.00099311	1.3576	0.00070982	522.8379052430649	107.1	0.2872	107.26	107.14	107.43	0.15781					15	13	2	0	0	0	2.3239	1	46015	46015		0.79363	0.10326	1	3236500			29875	3730	14812	14871	34280	34280					0.14030025084753106
RRVLAGTT	8	Unmodified	_RRVLAGTT_					0	0	0		ENST00000436622.1_1_2:24345702-24346289:-|nuORF;ENST00000313213.4_1_2:24345404-24346289:-|nuORF	ENST00000436622.1_1_2:24345702-24346289:-|nuORF	ENST00000436622.1_1_2:24345702-24346289:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2687866091728	2	437.266876	872.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.79	1	101.86	101.36	102.36	0.067009								0	0	0	1.0178	1	42619	42619		0.69038	0	1				29876	5811	14813	14872	34281	34281					0.0778402671146523
RRVLTDEL	8	Unmodified	_RRVLTDEL_					0	0	0		ENSG00000120708|ENST00000442011|TGFBI;ENST00000515433.1_1_5:135382542-135382743:+|nuORF;ENST00000506699.5_1_5:135382542-135383974:+|nuORF	ENSG00000120708|ENST00000442011|TGFBI	ENSG00000120708|ENST00000442011|TGFBI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2908813357353	2	501.290548	1000.56654	2.6915	0.0013492	-1.2106	-0.00060688	1.4808	0.00074233	501.2898334514565	81.958	0.5526	82.238	81.906	82.459	0.2802					26	17	2	0	0	0	0.89178	1	34336	34336		0.69038	0	1	1752000			29877	2115	14814	14873	34282	34282					0.06628261191792717
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2015869021416	4	328.202588	1308.78124	-2.1213	-0.00069621	2.0918	0.00068652	-0.029523	-9.6894E-06	328.2030365179827	37.778	0.70225	37.778	37.47	38.172	0					70	24	4	0	0	0	1.0191	1	15899	15899		2.6312	0.19645	1	9907200			29878	1303	14815	14874	34283	34283					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2021362185478	4	328.202588	1308.78124	-2.0918	-0.00068655	1.8128	0.00059497	-0.27903	-9.158E-05	328.20286600368524	38.54	0.65027	38.54	38.132	38.782	0					75	29	4	0	0	0	1.0156	1	16160	16160		2.8433	0.10809	1	10715000			29879	1303	14815	14874	34284	34284					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2680236697197	3	437.267691	1308.78124	1.2901	0.00056411	0.90464	0.00039557	2.1947	0.00095968	437.2675329460279	42.015	0.85207	42.015	41.627	42.479	0					60	26	3	0	0	0	1.0365	1	17739	17739		1.2148	0	1	1120900			29880	1303	14815	14874	34285	34285					0.13920484735899663
RRVLVLMASKH	11	Unmodified	_RRVLVLMASKH_					0	0	0		nc|ENSG00000100796|Q6IN85-4|PPP4R3A;nc|ENSG00000100796|Q6IN85-2|PPP4R3A;ENSG00000100796|ENST00000554943|PPP4R3A;nc|ENSG00000100796|Q6IN85-5|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	nc|ENSG00000100796|Q6IN85-4|PPP4R3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2018005251884	4	328.202588	1308.78124	-0.99864	-0.00032776	-0.88099	-0.00028914	-1.8796	-0.0006169	328.20158769933795	36.012	0.47667	37.289	37.064	37.54	1.2762					73	28	3	0	0	0	1.0156	1	15052	15052		2.8433	0.4085	1	7618900			29881	1303	14815	14874	34286	34286					0.13920484735899663
RRVPRKLKLRG	11	Unmodified	_RRVPRKLKLRG_					0	0	0		ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	345.4857971072197	4	345.486203	1377.9157	-2.0505	-0.0007084	1.0391	0.00035899	-1.0114	-0.00034942	345.4864837309632	24.629	0.61075	24.629	24.552	25.163	0					35	19	4	0	0	0	1.0402	1	10277	10277		0.094841	0	1	23365000			29882	6724	14816	14875	34287	34287					0.2418630627280436
RRVPRKLKLRG	11	Unmodified	_RRVPRKLKLRG_					0	0	0		ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.4853698611259	4	345.486203	1377.9157	0.13776	4.7593E-05	-2.4593	-0.00084965	-2.3215	-0.00080206	345.48520315236226	24.384	1.1581	25.625	25.082	26.24	1.241					98	37	3	0	0	0	1.0402	1	10112	10112		0.08335	0.08335	1	3804600			29883	6724	14816	14875	34288	34288					0.2418630627280436
RRVPRKLKLRG	11	Unmodified	_RRVPRKLKLRG_					0	0	0		ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	ENST00000469140.2_1_14:105929892-105933123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4853698611259	4	345.486203	1377.9157	0.14379	4.9676E-05	-2.5881	-0.00089414	-2.4443	-0.00084446	345.7362658095653	25.057	0.60576	26.774	26.391	26.997	1.7167					50	19	3	0	0	0	1.0402	1	10463	10463		0.094841	0.011491	1	2494100			29884	6724	14816	14875	34289	34289					0.2418630627280436
RRVQRPRGR	9	Unmodified	_RRVQRPRGR_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.2474548220634	3	394.246389	1179.71734	0.55191	0.00021759	2.0327	0.00080137	2.5846	0.001019	394.2470764659531	90.454	1.5663	90.454	90.095	91.662	0					97	49	5	0	0	0	0.8462	1	37782	37782		1.0715	0.10919	1	33909000	+		29885	11043	14817	14876	34290	34290					0.13466885413845375
RRVQRPRGR	9	Unmodified	_RRVQRPRGR_					0	0	0			REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	REV__nc|ENSG00000171777|Q8TDF6-3|RASGRP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	590.8677245974541	2	590.865946	1179.71734	2.4636	0.0014556	0.87096	0.00051462	3.3345	0.0019703	590.8663908332902	90.455	0.65047	90.455	90.193	90.843	0					74	20	5	0	0	0	0.85206	1	37884	37884		0	0	1	65063000	+		29886	11043	14817	14876	34291	34291					0.13466885413845375
RRVRPVSLMVP	11	Unmodified	_RRVRPVSLMVP_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2680847048759	3	437.267691	1308.78124	1.1167	0.00048828	-0.20159	-8.8147E-05	0.91507	0.00040013	437.26739026282524	37.753	0.57952	37.753	37.574	38.154	0					29	19	2	0	0	0	0.99899	2	15881	15827;15881		3.8459	1.4111	1	1537800			29887	7578	14818	14877	34292;34293	34293					0.13920484735899663
RRVRPVSLMVP	11	Unmodified	_RRVRPVSLMVP_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2028686404228	4	328.202588	1308.78124	0.99574	0.00032681	1.0715	0.00035167	2.0673	0.00067848	328.2027426683189	38.867	1.1585	39.175	38.857	40.015	0.30857					135	37	5	0	0	0	1.0191	2	16286	16286;16536		2.6312	0.12547	1	20874000			29888	7578	14818	14877	34294;34295	34294					0.13920484735899663
RRVRRRKFRPT	11	Unmodified	_RRVRRRKFRPT_					0	0	0			REV__nc|ENSG00000203880|Q9NV79-3|PCMTD2	REV__nc|ENSG00000203880|Q9NV79-3|PCMTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.9929992556572	3	509.990431	1526.94946	3.5154	0.0017928	0.72581	0.00037016	4.2412	0.002163	509.99108032384464	105.71	0.12927	105.88	105.81	105.94	0.16679					19	6	4	0	0	0	1.0405	1	45035	45035		0	0	1	30418000	+		29889	11766	14819	14878	34296	34296					0.20706727764559218
RRVWRFFK	8	Unmodified	_RRVWRFFK_					0	0	0			REV__ENSG00000185955|ENST00000332375|SPACDR	REV__ENSG00000185955|ENST00000332375|SPACDR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8576537966728	2	597.853984	1193.69342	4.187	0.0025032	4.2503	0.0025411	8.4373	0.0050443	597.8562392073294	91.06	0.31737	92.042	91.878	92.196	0.98157					20	9	3	0	0	0	0.89051	1	38367	38367		2.3027	0.4585	1	902820	+		29890	11484	14820	14879	34297	34297					0.1043165192743345
RRWEKKEEKKR	11	Unmodified	_RRWEKKEEKKR_					0	0	0		ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2792846560478	3	524.974224	1571.90084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.309	1	38.309	37.809	38.809	0								0	0	0	0.63775	1	16058	16058		0.08335	0	1				29891	6472	14821	14880	34298	34298					0.13776769614173645
RRWEKKEEKKR	11	Unmodified	_RRWEKKEEKKR_					0	0	0		ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	786.7951537966728	2	786.957698	1571.90084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.903	1	98.13	97.63	98.63	0.22776								0	0	0	0.63775	1	41203	41203		1.1933	0	1				29892	6472	14821	14880	34299	34299					0.13776769614173645
RRWEKKEEKKR	11	Unmodified	_RRWEKKEEKKR_					0	0	0		ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	ENST00000426911.2_1_X:136058956-136065632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	786.9576293826103	2	786.957698	1571.90084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.938	1	98.165	97.665	98.665	0.22776								0	0	0	0.63775	1	41218	41218		2.4985	0	1				29893	6472	14821	14880	34300	34300					0.13776769614173645
RRWILTLN	8	Unmodified	_RRWILTLN_					0	0	0			REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3278686404228	2	536.324725	1070.6349	2.4463	0.001312	4.0363	0.0021648	6.4826	0.0034768	536.3264394383956	39.494	0.35233	40.804	40.586	40.938	1.3102					32	11	4	0	0	0	0.43377	2	16552	16552;16600		52.268	6.2513	1	10752000	+		29894	14077	14822	14881	34301;34302	34301					0.10240550562321005
RRWILTLN	8	Unmodified	_RRWILTLN_					0	0	0			REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3286010622978	2	536.324725	1070.6349	1.5577	0.00083541	3.4799	0.0018663	5.0375	0.0027018	536.326049186716	38.966	0.32177	40.802	40.622	40.944	1.8366					27	9	4	0	0	0	0.38289	1	16340	16340		57.471	11.45	1	8095900	+		29895	14077	14822	14881	34303	34303					0.10240550562321005
RRWILTLN	8	Unmodified	_RRWILTLN_					0	0	0			REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	REV__ENST00000592399.5_1_17:76130956-76132740:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.2980224490166	2	536.324725	1070.6349	1.5577	0.00083541	3.4799	0.0018663	5.0375	0.0027018	536.326049186716	38.966	0.32177	40.802	40.622	40.944	1.8366					27	9	4	0	0	0	2.3239	1	16385	16385		21.747	9.2151	1	8095900	+		29896	14077	14822	14881	34304	34304					0.10240550562321005
RRWKARRNKFW	11	Unmodified	_RRWKARRNKFW_					0	0	0			REV__ENSG00000133937|ENST00000238558|GSC	REV__ENSG00000133937|ENST00000238558|GSC	MSMS	GG20161007_CRH_Patient100_W632_02	4	802.4621459841728	2	802.463284	1602.91202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.02	1	102.21	101.71	102.71	0.19076								0	0	0	0.63775	1	42900	42900		1.3295	1.0225	1		+		29897	9888	14823	14882	34305	34305					0.13467636498944557
RRWKFRAMRKI	11	Unmodified	_RRWKFRAMRKI_					0	0	0		ENST00000530606.1_1_10:77055306-77055468:+|nuORF	ENST00000530606.1_1_10:77055306-77055468:+|nuORF	ENST00000530606.1_1_10:77055306-77055468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.8140136599541	3	516.645384	1546.91432	4.3706	0.0022581	-2.9482	-0.0015232	1.4224	0.00073488	516.6440134440421	91.58	1.9015	92.516	91.8	93.702	0.93623					74	59	2	0	0	0	0.14606	1	38385	38385		0.094841	0	1	935500			29898	7164	14824	14883	34306	34306					0.16274348912406822
RRWKKLNWRRH	11	Unmodified	_RRWKKLNWRRH_					0	0	0		ENST00000550078.2_2_1:203816644-203816719:+|nuORF	ENST00000550078.2_2_1:203816644-203816719:+|nuORF	ENST00000550078.2_2_1:203816644-203816719:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.9916869997978	3	545.990431	1634.94946	1.7051	0.00093096	-1.3058	-0.00071296	0.39927	0.000218	545.9904131264034	52.468	0.24167	52.794	52.683	52.924	0.32553					12	7	2	0	0	0	1.0405	1	22013	22013		0	0	1	1116900			29899	7260	14825	14884	34307	34307					0.15738727764551186
RRWKQKLGR	9	Unmodified	_RRWKQKLGR_					0	0	0		ENST00000450860.1_1_X:70403439-70403484:-|nuORF	ENST00000450860.1_1_X:70403439-70403484:-|nuORF	ENST00000450860.1_1_X:70403439-70403484:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	409.9215881228447	3	409.923024	1226.74724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.506	1	12.175	11.675	12.675	0.66934								0	0	0	0.42693	1	4781	4781		4.5289	0.12271	1				29900	6609	14826	14885	34308	34308					0.14293824359151586
RRWNLFRYH	9	Unmodified	_RRWNLFRYH_					0	0	0			REV__ENST00000550564.1_1_12:53468877-53473168:-|nuORF	REV__ENST00000550564.1_1_12:53468877-53473168:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9128906130791	3	449.910895	1346.71086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.682	1	19.661	19.161	20.161	0.97922								0	0	0	0.42693	1	7783	7783		0.26902	0	1		+		29901	10879	14827	14886	34309	34309					0.05136947462460739
RRWNLFRYH	9	Unmodified	_RRWNLFRYH_					0	0	0			REV__ENST00000550564.1_1_12:53468877-53473168:-|nuORF	REV__ENST00000550564.1_1_12:53468877-53473168:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9122802615166	3	449.910895	1346.71086	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.378	1	17.417	16.917	17.917	1.0392								0	0	0	0.42693	1	6801	6801		0.26902	0	1		+		29902	10879	14827	14886	34310	34310					0.05136947462460739
RRWRGRLQK	9	Unmodified	_RRWRGRLQK_					0	0	0			REV__ENST00000525546.5_1_1:26759017-26759095:+|nuORF	REV__ENST00000525546.5_1_1:26759017-26759095:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3851196169853	2	628.383971	1254.75339	1.7095	0.0010742	-1.1342	-0.00071269	0.57534	0.00036154	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.83213	1	33714	33714		2.0598	0.40713	1	7710600	+		29903	13660	14828	14887	34311	34311					0.1362034259068423
RRWRRKRRLKG	11	Unmodified	_RRWRRKRRLKG_					0	0	0			REV__ENSG00000224109|ENST00000417339|CENPVL3	REV__ENSG00000224109|ENST00000417339|CENPVL3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	313.6979858279228	5	314.405676	1566.992	-2.0427	-0.00064223	0.25988	8.1709E-05	-1.7828	-0.00056052	314.405805318921	47.142	0.71843	47.142	46.812	47.53	0					34	22	2	0	0	0	0.14606	1	19668	19668		0.08335	0	1	788430	+		29904	11888	14829	14888	34312	34312					0.2311812289278805
RRWRRRRLLLP	11	Unmodified	_RRWRRRRLLLP_					0	0	0		ENSG00000172765.17,TMCC1,chr3,-,I1.1,129893420,129893493|148|3.38|1|intron	ENSG00000172765.17,TMCC1,chr3,-,I1.1,129893420,129893493|148|3.38|1|intron	ENSG00000172765.17,TMCC1,chr3,-,I1.1,129893420,129893493|148|3.38|1|intron	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.0035278201103	5	316.407576	1577.0015	-2.7456	-0.00086872	0.32438	0.00010264	-2.4212	-0.00076608	316.4075595492907	29.368	0.30453	29.368	29.241	29.545	0					11	9	2	0	0	0	0.14606	1	12251	12251		0	0	1	211000			29905	4251	14830	14889	34313	34313					0.23607891178357931
RRWRRRRPA	9	Unmodified	_RRWRRRRPA_					0	0	0		ENST00000556735.1_1_14:51134724-51134856:-|nuORF	ENST00000556735.1_1_14:51134724-51134856:-|nuORF	ENST00000556735.1_1_14:51134724-51134856:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2025329470634	4	328.203882	1308.78642	-2.1213	-0.00069621	-1.8519	-0.00060779	-3.9731	-0.001304	328.2030365179827	37.778	0.70225	37.778	37.47	38.172	0					70	24	4	0	0	0	0.82114	1	15777	15777		2.4985	0.24576	1	9907200			29906	7307	14831	14890	34314	34314					0.14437969433402031
RRWRRRRWGKE	11	Unmodified	_RRWRRRRWGKE_					0	0	0			REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	REV__ENST00000597330.1_1_19:58557520-58558126:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0058166384697	5	329.194252	1640.93488	1.3245	0.00043602	-1.0813	-0.00035596	0.24319	8.0056E-05	329.39399741373234	54.169	0.71844	54.49	54.128	54.847	0.32088					30	23	2	0	0	0	0.14606	1	22687	22687		0.094841	0	1	922220	+		29907	14098	14832	14891	34315	34315					0.14004655616440687
RRWRVQRRP	9	Unmodified	_RRWRVQRRP_					0	0	0		ENST00000474959.5_1_1:153631432-153631540:+|nuORF	ENST00000474959.5_1_1:153631432-153631540:+|nuORF	ENST00000474959.5_1_1:153631432-153631540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.4528686404228	4	328.201073	1308.77519	0.88873	0.00029168	3.0093	0.00098766	3.898	0.0012793	328.20165622248624	37.018	0.62138	37.323	37.048	37.67	0.30497					89	31	4	0	0	0	0.8462	1	15492	15492		1.0715	0.057888	1	12820000			29908	6776	14833	14892	34316	34316					0.13315147339244504
RRWRVQRRP	9	Unmodified	_RRWRVQRRP_					0	0	0		ENST00000474959.5_1_1:153631432-153631540:+|nuORF	ENST00000474959.5_1_1:153631432-153631540:+|nuORF	ENST00000474959.5_1_1:153631432-153631540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2013427615166	4	328.201073	1308.77519	0.2159	7.0857E-05	2.8333	0.00092988	3.0492	0.0010007	328.20183655551284	34.636	0.29819	36.459	36.371	36.669	1.8227					52	30	2	0	0	0	0.81521	1	14554	14554		2.7352	0.48247	1	19821000			29909	6776	14833	14892	34317	34317					0.13315147339244504
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2035400271416	4	328.202751	1308.7819	0.99574	0.00032681	0.57492	0.00018869	1.5707	0.0005155	328.2027426683189	38.867	1.1585	39.175	38.857	40.015	0.30857					135	37	5	0	0	0	0.88031	1	16437	16437		3.5871	1.3343	1	20874000			29910	12708	14834	14893	34318	34318					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2693664431572	3	437.267909	1308.7819	2.038	0.00089113	0.24284	0.00010619	2.2808	0.00099732	437.26777768687555	39.19	0.81233	39.499	38.919	39.731	0.30857					68	26	3	0	0	0	0.89588	1	16527	16527		1.9064	0.57673	1	2674100			29911	12708	14834	14893	34319	34319					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2682678103447	3	437.267909	1308.7819	2.1909	0.00095801	-1.3815	-0.00060409	0.8094	0.00035392	437.2664554848373	41.85	0.27449	42.17	42.01	42.285	0.32058					18	8	3	0	0	0	0.88031	1	17562	17562		3.5871	0.95582	1	938030			29912	12708	14834	14893	34320	34320					0.13985647447270821
RRWWPLLLGL	10	Unmodified	_RRWWPLLLGL_					0	0	0			REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	437.267909	1308.7819	1.1928	0.00052158	1.5271	0.00066776	2.7199	0.0011893	437.26837470166555	39.59	0.68311	39.59	39.39	40.073	0	0.045931	0.00083225	NaN	1.9064	51	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2653300			29913	12708	14834	14893							0.13985647447270821
RRYHRKNPYRH	11	Unmodified	_RRYHRKNPYRH_					0	0	0		L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|17|1|sense	L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|17|1|sense	L1PB1_dup435|chr1:148902763-148905178:-|1.8547645190966555|0.2878265206874703|2.69|429.0|17|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1582.849658191204	1	1582.85742	1581.85014	-0.1292	-0.0002045	0.054949	8.6977E-05	-0.074246	-0.00011752	1582.8578156822068	35.645	0.15945	36.92	36.885	37.045	1.2746					14	9	2	0	0	0	1.0405	1	14977	14977		0	0	1	52676000			29914	7771	14835	14894	34321	34321					0.08249285079841684
RSAGAPSGHT	10	Unmodified	_RSAGAPSGHT_					0	0	0		ENST00000485978.1_1_9:136337145-136339092:-|nuORF	ENST00000485978.1_1_9:136337145-136339092:-|nuORF	ENST00000485978.1_1_9:136337145-136339092:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	314.1596557497978	3	314.158024	939.452242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.963	1	77.73	77.23	78.23	1.7672								0	0	0	0.66227	1	31871	31871		0.62683	0	1				29915	6859	14836	14895	34322	34322					-0.01990628570285935
RSARLIRHRRI	11	Unmodified	_RSARLIRHRRI_					0	0	0		ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4813110232353	4	359.231368	1432.89637	1.0052	0.00036111	-0.010856	-3.8999E-06	0.99438	0.00035721	359.482560344782	32.687	0.44474	32.981	32.805	33.25	0.29431					17	15	2	0	0	0	1.0395	1	13830	13830		0.08335	0	1	1688200			29916	2905	14837	14896	34323	34323					0.1972334998192764
RSARRKRKKHR	11	Unmodified	_RSARRKRKKHR_					0	0	0		ENSG00000122728|ENST00000242310|TAF1L;TAF1L|p.I1514Qfs*6|1|0.03|ENSG00000122728|chr9:32631039-32631040|AT/-|frameshift_variant;TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	ENSG00000122728|ENST00000242310|TAF1L	ENSG00000122728|ENST00000242310|TAF1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1014892458916	4	370.489542	1477.92906	0.064306	2.3825E-05	0.89809	0.00033273	0.9624	0.00035656	370.7403191553773	28.082	0.39223	29.361	29.153	29.545	1.2789					34	12	3	0	0	0	0.14606	1	11755	11755		0	0	1	1617400			29917	2166	14838	14897	34324	34324					0.20921557104770727
RSCSLMIQYL	10	Unmodified	_RSCSLMIQYL_					0	0	0			REV__ENST00000396981.6_1_17:4175487-4175577:-|nuORF	REV__ENST00000396981.6_1_17:4175487-4175577:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3022949099541	2	607.307026	1212.5995	0.90735	0.00055104	-2.4085	-0.0014627	-1.5012	-0.00091167	607.3047236975019	58.475	0.28043	59.893	59.722	60.003	1.4181					15	8	2	0	0	0	0.12991	1	24502	24502		58.679	16.584	1	3598500	+		29918	12858	14839	14898	34325	34325					0.0017038392800259317
RSFDRIFR	8	Unmodified	_RSFDRIFR_					0	0	0			REV__ENSG00000185085|ENST00000330574|INTS5	REV__ENSG00000185085|ENST00000330574|INTS5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7942382693291	2	548.804157	1095.59376	1.5885	0.00087178	-2.1574	-0.001184	-0.56893	-0.00031223	548.8034560788802	56.956	0.48708	58.371	58.093	58.58	1.4145					36	15	3	0	0	0	0.86113	1	23793	23793		15.847	0	1	24160000	+		29919	11445	14840	14899	34326	34326					0.04978789522851912
RSGKRSLV	8	Unmodified	_RSGKRSLV_					0	0	0			REV__ENST00000490764.5_1_2:234327972-234343029:+|nuORF	REV__ENST00000490764.5_1_2:234327972-234343029:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.7813598513603	2	451.780151	901.545748	2.1958	0.00099202	1.0956	0.00049497	3.2914	0.001487	451.7806120564948	67.995	0.50943	68.318	68.057	68.566	0.32269					28	15	2	0	0	0	0.89124	1	28498	28498		1.8442	0	1	1161000	+		29920	13425	14841	14900	34327	34327					0.09103715602805096
RSIVRLPRLTR	11	Unmodified	_RSIVRLPRLTR_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.2951843142509	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.2	1	104.2	103.7	104.7	0								0	0	0	0.63775	1	43931	43931		0.40827	0	1		+		29921	11638	14842	14901	34328	34328					0.19978607281950644
RSIVRLPRLTR	11	Unmodified	_RSIVRLPRLTR_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.2995483279228	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.94	1	101	100.5	101.5	0.067009								0	0	0	0.63775	1	42256	42256		0.40827	0.31342	1		+		29922	11638	14842	14901	34329	34329					0.19978607281950644
RSIVRLPRLTR	11	Unmodified	_RSIVRLPRLTR_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2946044802666	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.13	1	104.29	103.79	104.79	0.16055								0	0	0	0.63775	1	44054	44054		0.40827	0	1		+		29923	11638	14842	14901	34330	34330					0.19978607281950644
RSKDIIEHL	9	Unmodified	_RSKDIIEHL_					0	0	0			REV__nc|ENSG809|P63128|ERVK-9_pol	REV__nc|ENSG809|P63128|ERVK-9_pol	MSMS	GG20161007_CRH_Patient100_A02_02	2	555.8135253787041	2	555.81693	1109.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.216	1	78.525	78.025	79.025	0.30933								0	0	0	0.317	1	32702	32702		16.942	4.4107	1		+		29924	14579	14843	14902	34331	34331					0.06888219254597061
RSKRQRKHK	9	Unmodified	_RSKRQRKHK_					0	0	0			REV__ENST00000545260.5_2_10:34398874-34399204:-|nuORF	REV__ENST00000545260.5_2_10:34398874-34399204:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	307.0111266970634	4	306.694353	1222.7483	0.51289	0.0001573	-1.2985	-0.00039824	-0.78559	-0.00024094	306.6939086609002	31.566	0.70227	31.857	31.386	32.088	0.29086					38	22	2	0	0	0	0.11946	1	13271	13271		0.86438	0	1	485980	+		29925	13799	14844	14903	34332	34332					0.1458403872807139
RSLKRKPSRPK	11	Unmodified	_RSLKRKPSRPK_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2208740115166	4	338.970385	1351.85244	-1.799	-0.00060981	1.8918	0.00064127	0.092794	3.1454E-05	339.22197429959954	35.991	0.18377	35.991	35.832	36.016	0					19	13	2	0	0	0	1.0365	1	15097	15097		1.2148	0.10508	1	6521800	+		29926	9481	14845	14904	34333	34333					0.19058320764906966
RSLKRKPSRPK	11	Unmodified	_RSLKRKPSRPK_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.9709350466728	4	338.970385	1351.85244	0.77786	0.00026367	-1.9625	-0.00066524	-1.1847	-0.00040157	339.22001085112146	32.88	0.90034	33.174	32.621	33.521	0.29431					79	30	4	0	0	0	1.0391	1	13942	13942		0.40827	0.041592	1	4237600	+		29927	9481	14845	14904	34334	34334					0.19058320764906966
RSLKRKPSRPK	11	Unmodified	_RSLKRKPSRPK_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.9705078005791	4	338.970385	1351.85244	0.34872	0.00011821	-2.0475	-0.00069405	-1.6988	-0.00057585	338.97023840668885	31.132	0.86855	32.957	32.461	33.33	1.8246					94	29	5	0	0	0	1.0365	1	12934	12934		1.2148	0.76031	1	4520700	+		29928	9481	14845	14904	34335	34335					0.19058320764906966
RSMDDIDYK	9	Unmodified	_RSMDDIDYK_					0	0	0		ENSG00000213047|ENST00000620048|DENND1B	ENSG00000213047|ENST00000620048|DENND1B	ENSG00000213047|ENST00000620048|DENND1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5110351443291	3	381.509734	1141.50737	0.091589	3.4942E-05	2.7805	0.0010608	2.8721	0.0010957	381.51128335645575	18.079	1.6887	19.527	19.016	20.705	1.448					88	55	2	0	0	0	0.78661	1	7841	7841		3.8763	0.27984	1	793540			29929	5210	14846	14905	34336	34336					-0.05772002884691574
RSNGVAEP	8	Unmodified	_RSNGVAEP_					0	0	0			REV__tr|A0A7D6VZN8|A0A7D6VZN8_9CLOTcitramalatesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20940PE=3SV=1	REV__tr|A0A7D6VZN8|A0A7D6VZN8_9CLOTcitramalatesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20940PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	829.4164916872978	1	829.416256	828.40898	2.9979	0.0024865	-2.6238	-0.0021762	0.3741	0.00031029	829.4140695623388	104.72	0.077225	104.89	104.85	104.92	0.1731					9	3	3	0	0	0	0.8909	1	44382	44382		2.0598	0	1	55453000	+		29930	15571	14847	14906	34337	34337					-0.012088183475839287
RSPLLAAARA	10	Unmodified	_RSPLLAAARA_					0	0	0			REV__nc|ENSG00000130202|Q92692-2|NECTIN2	REV__nc|ENSG00000130202|Q92692-2|NECTIN2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	341.7221862673759	3	342.545331	1024.61416	1.0754	0.00036838	1.3916	0.0004767	2.4671	0.00084508	342.547243117375	37.502	0.45744	37.807	37.714	38.171	0.30497					19	16	2	0	0	0	0.12553	1	15903	15903		2.8433	0.56051	1	602670	+		29931	9768	14848	14907	34338	34338					0.10283960182641749
RSPLLLHGE	9	Unmodified	_RSPLLLHGE_					0	0	0		SEZ6L|p.K116Qfs*112|1|0.11|ENSG00000100095|chr22:26292650-26292651|-/C|frameshift_variant	SEZ6L|p.K116Qfs*112|1|0.11|ENSG00000100095|chr22:26292650-26292651|-/C|frameshift_variant	SEZ6L|p.K116Qfs*112|1|0.11|ENSG00000100095|chr22:26292650-26292651|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1957885622978	3	341.197819	1020.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.527	1	93.527	93.027	94.027	0								0	0	0	0.42693	1	39088	39088		2.086	0	1				29932	15951	14849	14908	34339	34339					0.06216565054421608
RSPLLRRRR	9	Unmodified	_RSPLLRRRR_					0	0	0			REV__ENST00000360807.8_2_20:17641169-17662761:-|nuORF	REV__ENST00000360807.8_2_20:17641169-17662761:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1992675662041	4	303.199536	1208.76904	0.48233	0.00014624	-0.84126	-0.00025507	-0.35893	-0.00010883	303.19924622320025	30.991	1.5517	31.282	30.444	31.996	0.29086					161	51	4	0	0	0	0.85252	1	12962	12962		0.20686	0	1	6469700	+		29933	12595	14850	14909	34340	34340					0.1730062910773995
RSPLTLIDLV	10	Unmodified	_RSPLTLIDLV_					0	0	0		ENSG00000026559|ENST00000371571|KCNG1	ENSG00000026559|ENST00000371571|KCNG1	ENSG00000026559|ENST00000371571|KCNG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2335693240166	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.358	1	84.028	83.528	84.528	1.67								0	0	0	0.66161	1	34549	34549		1.7423	0	1				29934	629	14851	14910	34341	34341					0.11794847091277916
RSPRGILG	8	Unmodified	_RSPRGILG_					0	0	0		ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2620422244072	2	428.261594	854.508634	1.042	0.00044623	0.3961	0.00016963	1.4381	0.00061587	428.26172948888245	73.476	0.98903	73.476	73.184	74.173	0					91	31	5	0	0	0	0.89198	1	30633	30633		0	0	1	296800000			29935	5740	14852	14911	34342	34342					0.07556044057059808
RSPRGILG	8	Unmodified	_RSPRGILG_					0	0	0		ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	ENST00000298310.9_1_14:50319457-50319715:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	428.2625610232353	2	428.261594	854.508634	2.5655	0.0010987	0.013577	5.8146E-06	2.5791	0.0011045	428.2614299845621	73.216	0.82916	73.541	73.276	74.105	0.32494					93	26	5	0	0	0	0.89198	2	30615	30615;30665		0	0	1	261670000			29936	5740	14852	14911	34343;34344	34343					0.07556044057059808
RSPSKLRKT	9	Unmodified	_RSPSKLRKT_					0	0	0			REV__ENSG00000065809|ENST00000181796|FAM107B	REV__ENSG00000065809|ENST00000181796|FAM107B	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.2232543826103	3	358.224368	1071.65128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.585	1	65.585	65.085	66.085	0								0	0	0	0.42693	1	27330	27330		2.086	0	1		+		29937	8678	14853	14912	34345	34345					0.11831631728409775
RSPVLRQY	8	Unmodified	_RSPVLRQY_					0	0	0			REV__ENST00000487626.1_1_3:111904329-111904731:-|nuORF	REV__ENST00000487626.1_1_3:111904329-111904731:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	340.1974365115166	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.672	1	39.672	39.172	40.172	0								0	0	0	1.0178	1	16627	16627		0.35063	0	1		+		29938	10682	14854	14913	34346	34346					0.06387984774266897
RSQIVLFQKRR	11	Unmodified	_RSQIVLFQKRR_					0	0	0		nc|ENSG00000205238|Q495Y8-2|SPDYE2;nc|ENSG00000136206|Q8NFV5|SPDYE1;ENSG00000136206|ENST00000693451|SPDYE1;ENSG00000260097|ENST00000563237|SPDYE6;ENSG00000205238|ENST00000691607|SPDYE2;ENSG00000173678|ENST00000507450|SPDYE2B;ENSG00000170092|ENST00000625065|SPDYE5	nc|ENSG00000205238|Q495Y8-2|SPDYE2	nc|ENSG00000205238|Q495Y8-2|SPDYE2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	477.2025939822197	3	477.628276	1429.863	3.4792	0.0016618	-1.4918	-0.00071251	1.9875	0.00094927	477.62750246070567	94.388	0.43897	94.533	94.325	94.764	0.14493					22	13	2	0	0	0	0.14606	1	39527	39527		0.073264	0.073264	1	656730			29939	2712	14855	14914	34347	34347					0.16526303419345822
RSQIVLFQKRR	11	Unmodified	_RSQIVLFQKRR_					0	0	0		nc|ENSG00000205238|Q495Y8-2|SPDYE2;nc|ENSG00000136206|Q8NFV5|SPDYE1;ENSG00000136206|ENST00000693451|SPDYE1;ENSG00000260097|ENST00000563237|SPDYE6;ENSG00000205238|ENST00000691607|SPDYE2;ENSG00000173678|ENST00000507450|SPDYE2B;ENSG00000170092|ENST00000625065|SPDYE5	nc|ENSG00000205238|Q495Y8-2|SPDYE2	nc|ENSG00000205238|Q495Y8-2|SPDYE2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	477.628276	1429.863	2.1418	0.001023	0.15711	7.5038E-05	2.2989	0.001098	477.627415469132	94.497	0.36472	94.497	94.307	94.671	0	-0.10187	0.0035696	NaN	0.073264	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678410			29940	2712	14855	14914							0.16526303419345822
RSQIVLFQKRR	11	Unmodified	_RSQIVLFQKRR_					0	0	0		nc|ENSG00000205238|Q495Y8-2|SPDYE2;nc|ENSG00000136206|Q8NFV5|SPDYE1;ENSG00000136206|ENST00000693451|SPDYE1;ENSG00000260097|ENST00000563237|SPDYE6;ENSG00000205238|ENST00000691607|SPDYE2;ENSG00000173678|ENST00000507450|SPDYE2B;ENSG00000170092|ENST00000625065|SPDYE5	nc|ENSG00000205238|Q495Y8-2|SPDYE2	nc|ENSG00000205238|Q495Y8-2|SPDYE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	477.628276	1429.863	3.3231	0.0015872	-2.8462	-0.0013594	0.47686	0.00022776	477.62701913698595	93.434	0.37541	94.711	94.484	94.859	1.277	0.11198	-0.00073386	NaN	0.073264	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	536950			29941	2712	14855	14914							0.16526303419345822
RSRKAKKLF	9	Unmodified	_RSRKAKKLF_					0	0	0		tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.5793640017509	3	378.580375	1132.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.493	1	31.783	31.283	32.283	0.29086								0	0	0	0.42693	1	13219	13219		0.86438	0.62853	1				29942	16218	14856	14915	34348	34348					0.1582450137905198
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2621337771416	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.85	1	109.01	108.51	109.51	0.15898								0	0	0	0.42693	1	47158	47158		0	0	1				29943	16124	14857	14916	34349	34349					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2621948122978	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.99	1	109.15	108.65	109.65	0.15898								0	0	0	0.42693	1	47245	47245		0	0	1				29944	16124	14857	14916	34350	34350					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2621032595634	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.11	1	109.27	108.77	109.77	0.15898								0	0	0	0.42693	1	47325	47325		0	0	1				29945	16124	14857	14916	34351	34351					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2615539431572	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.22	1	109.38	108.88	109.88	0.15898								0	0	0	0.42693	1	47392	47392		0	0	1				29946	16124	14857	14916	34352	34352					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2614929080009	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.32	1	109.48	108.98	109.98	0.15898								0	0	0	0.42693	1	47457	47457		0	0	1				29947	16124	14857	14916	34353	34353					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2617065310478	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.43	1	109.59	109.09	110.09	0.15898								0	0	0	0.42693	1	47524	47524		0	0	1				29948	16124	14857	14916	34354	34354					0.2091484269872126
RSRKILILL	9	Unmodified	_RSRKILILL_					0	0	0		tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	tr|A0A553SGV8|A0A553SGV8_NIACIIronABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11650PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2646972537041	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.63	1	109.79	109.29	110.29	0.15898								0	0	0	0.42693	1	47628	47628		0	0	1				29949	16124	14857	14916	34355	34355					0.2091484269872126
RSRKKRARPN	10	Unmodified	_RSRKKRARPN_					0	0	0			REV__ENSG00000170092|ENST00000625065|SPDYE5	REV__ENSG00000170092|ENST00000625065|SPDYE5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.5992309451103	3	423.597199	1267.76977	4.1516	0.0017586	0.076543	3.2423E-05	4.2282	0.001791	423.59720599206855	93.597	0.57309	94.468	94.194	94.767	0.87176					55	17	5	0	0	0	0.89803	1	39457	39457		0.15932	0	1	13232000	+		29950	10974	14858	14917	34356	34356					0.14659423756802425
RSRKKRARPN	10	Unmodified	_RSRKKRARPN_					0	0	0			REV__ENSG00000170092|ENST00000625065|SPDYE5	REV__ENSG00000170092|ENST00000625065|SPDYE5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.8954955935478	2	634.892161	1267.76977	3.8498	0.0024442	1.0395	0.00065998	4.8893	0.0031042	634.8925449914914	93.595	0.47889	94.467	94.226	94.705	0.87176					46	14	4	0	0	0	0.89803	1	39458	39458		0.35063	0	1	10314000	+		29951	10974	14858	14917	34357	34357					0.14659423756802425
RSRKRRHSKQF	11	Unmodified	_RSRKRRHSKQF_					0	0	0			REV__ENST00000519583.5_1_5:178044267-178044471:-|nuORF	REV__ENST00000519583.5_1_5:178044267-178044471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9637023806572	3	495.958908	1484.85489	4.8226	0.0023918	0.3809	0.00018891	5.2035	0.0025807	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0393	1	37684	37684		0.094841	0	1	3813600	+		29952	13617	14859	14918	34358	34358					0.13186169222581157
RSRRKHIL	8	Unmodified	_RSRRKHIL_					0	0	0		ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	ENST00000559454.5_1_15:49462693-49462759:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3423339724541	2	533.341241	1064.66793	2.7978	0.0014922	-1.6722	-0.00089184	1.1256	0.00060034	533.3405479462934	83.002	0.58801	84.214	83.92	84.508	1.2125					66	18	5	0	0	0	0.88958	1	34866	34866		2.8892	2.8892	1	42754000			29953	7324	14860	14919	34359	34359					0.1381817740502811
RSRRRKSWRRR	11	Unmodified	_RSRRRKSWRRR_					0	0	0		KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant	KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant	KDM5C|p.P1479Qfs*65|1|0.22|ENSG00000126012|chrX:53193214-53193214|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	800.4880859255791	2	800.485614	1598.95667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.086	1	58.086	57.586	58.586	0								0	0	0	0.63775	1	24234	24234		0	0	1				29954	7664	14861	14920	34360	34360					0.1811546036499294
RSRRSLRAKR	10	Unmodified	_RSRRSLRAKR_					0	0	0			REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	643.4087402224541	2	643.405435	1284.79632	2.5987	0.001672	1.5604	0.0010039	4.1591	0.002676	643.4063068220004	94.288	0.50206	94.433	94.165	94.667	0.14493					52	15	5	0	0	0	0.89803	1	39394	39394		1.1933	0.88631	1	17635000	+		29955	10889	14862	14921	34361	34361					0.16531112648112867
RSSALLQFFLK	11	Unmodified	_RSSALLQFFLK_					0	0	0			REV__Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|215|3|anti-sense	REV__Harlequin-int_dup159|chr4:69053326-69056858:+|5.903567647163159|0.4897717427831806|3.59|423.0|215|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3833495974541	2	655.38498	1308.75541	3.2726	0.0021448	-2.9712	-0.0019473	0.30133	0.00019748	655.3825315034384	82.484	1.4639	84.154	83.11	84.574	1.67					100	46	4	0	0	0	1.0332	1	34488	34488		3.8763	2.2237	1	4909200	+		29956	14167	14863	14922	34362	34362					0.11337913765282792
RSSALRPKRP	10	Unmodified	_RSSALRPKRP_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3574096560478	2	584.357088	1166.69962	1.9193	0.0011216	-1.138	-0.00066499	0.78131	0.00045656	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.89803	2	31195	31195;31301		1.4819	0.79152	1	6168700			29957	4202	14864	14923	34363;34364	34363					0.12294125368293862
RSSALRPKRP	10	Unmodified	_RSSALRPKRP_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3578979372978	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89803	2	31241	31241;31473		1.4819	1.4819	1	7390500			29958	4202	14864	14923	34365;34366	34365					0.12294125368293862
RSSARLTGKVF	11	Unmodified	_RSSARLTGKVF_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3573486208916	2	611.356754	1220.69895	2.1011	0.0012845	-1.2028	-0.00073536	0.89824	0.00054914	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	1.0214	1	33054	33054		2.4985	1.0166	1	6519600	+		29959	9416	14865	14924	34367	34367					0.09743285928584555
RSSARLTGKVF	11	Unmodified	_RSSARLTGKVF_					0	0	0			REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	REV__ENST00000437205.5_1_3:183639090-183689734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3584472537041	2	611.356754	1220.69895	1.8236	0.0011148	-0.11816	-7.2239E-05	1.7054	0.0010426	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	1.0214	1	32827	32827		2.4985	1.0166	1	5176900	+		29960	9416	14865	14924	34368	34368					0.09743285928584555
RSSDRKKAL	9	Unmodified	_RSSDRKKAL_					0	0	0		nc|ENSG00000075292|Q14966-3|ZNF638;ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-2|ZNF638;nc|ENSG00000075292|Q14966-6|ZNF638;nc|ENSG00000075292|Q14966-4|ZNF638	nc|ENSG00000075292|Q14966-3|ZNF638	nc|ENSG00000075292|Q14966-3|ZNF638	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8187744021416	2	530.814722	1059.61489	2.0445	0.0010852	-0.60647	-0.00032192	1.438	0.00076331	530.8142953149015	69.16	2.2442	70.526	69.352	71.596	1.3657					144	72	4	0	0	0	0.71526	1	28789	28789		6.7232	2.3939	1	15337000			29961	928	14866	14925	34369	34369					0.08746754831713588
RSSGSGGGA	9	Unmodified	_RSSGSGGGA_					0	0	0		ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	ENSG00000185640|ENST00000330553|KRT79	ENSG00000185640|ENST00000330553|KRT79	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	735.3405029177666	1	735.338006	734.33073	1.438	0.0010574	0.2813	0.00020685	1.7193	0.0012643	735.3386638269765	43.345	0.44334	45.289	45.041	45.485	1.9438					27	14	3	0	0	0	0.83213	1	18156	18156		2.0598	0	1	1272900		+	29962	362	14867	14926	34370	34370					-0.04706250932792955
RSSGSGGGA	9	Unmodified	_RSSGSGGGA_					0	0	0		ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	ENSG00000185640|ENST00000330553|KRT79	ENSG00000185640|ENST00000330553|KRT79	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	735.338006	734.33073	1.7308	0.0012727	-0.16449	-0.00012096	1.5663	0.0011517	735.3394240115939	45.114	0.41451	45.441	45.279	45.693	0.32674	0.12155	9.6871E-05	NaN	2.0598	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299830		+	29963	362	14867	14926							-0.04706250932792955
RSSGSGGGA	9	Unmodified	_RSSGSGGGA_					0	0	0		ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	ENSG00000185640|ENST00000330553|KRT79	ENSG00000185640|ENST00000330553|KRT79	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	735.338006	734.33073	1.4605	0.001074	-1.7715	-0.0013026	-0.31099	-0.00022868	735.3379596980255	43.876	0.55521	45.229	44.978	45.533	1.3536	-0.090521	-0.0010848	NaN	2.0598	23	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1307100		+	29964	362	14867	14926							-0.04706250932792955
RSSHLLRLLRH	11	Unmodified	_RSSHLLRLLRH_					0	0	0			REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	694.4227783083916	2	694.423294	1386.83203	2.7272	0.0018938	-2.6126	-0.0018143	0.11457	7.9559E-05	694.4213718143553	85.328	1.3251	85.328	84.653	85.978	0					96	41	4	0	0	0	1.0214	1	35617	35617		2.4985	1.3051	1	2759500	+		29965	8263	14868	14927	34371	34371					0.15409150105119807
RSSHLLRLLRH	11	Unmodified	_RSSHLLRLLRH_					0	0	0			REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4224120974541	2	694.423294	1386.83203	2.5051	0.0017396	-2.6953	-0.0018717	-0.19015	-0.00013205	694.4215105236693	85.212	1.1922	85.464	84.814	86.006	0.25227					78	37	3	0	0	0	1.0214	1	35649	35649		2.4985	1.169	1	3998800	+		29966	8263	14868	14927	34372	34372					0.15409150105119807
RSSHLLRLLRH	11	Unmodified	_RSSHLLRLLRH_					0	0	0			REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	694.4214965701103	2	694.423294	1386.83203	1.4089	0.00097839	-0.50373	-0.0003498	0.9052	0.00062859	694.4227351887042	84.433	0.89345	85.592	85.224	86.118	1.159					35	28	2	0	0	0	0.99329	1	35404	35404		4.1895	1.1943	1	3413400	+		29967	8263	14868	14927	34373	34373					0.15409150105119807
RSSHLLRLLRH	11	Unmodified	_RSSHLLRLLRH_					0	0	0			REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	REV__chr6:109250991-109254448|247|18.56|0.13|7.16|+|0|TE_info:L1PA2,L1PA2_dup2028,L1,LINE,donor,-,109245219,109250991|None,CCDC162P|87	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	694.4227783083916	2	694.423294	1386.83203	1.5588	0.0010825	-1.5158	-0.0010526	0.042942	2.982E-05	694.4221814776873	84.235	1.1503	85.831	85.338	86.488	1.5962					62	37	2	0	0	0	1.0214	1	35302	35302		2.4985	1.3051	1	5297400	+		29968	8263	14868	14927	34374	34374					0.15409150105119807
RSSIIKPNKRT	11	Unmodified	_RSSIIKPNKRT_					0	0	0			REV__MPP7|p.A501P|1|0.16|ENSG00000150054|chr10:28056530-28056530|C/G|missense_variant	REV__MPP7|p.A501P|1|0.16|ENSG00000150054|chr10:28056530-28056530|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3968994021416	2	650.39641	1298.77827	1.9699	0.0012812	-1.6854	-0.0010962	0.28447	0.00018502	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0366	2	33815	33815;34415		1.1933	0	1	10064000	+		29969	14367	14869	14928	34375;34376	34375					0.14082932882729438
RSSIRRLSTRR	11	Unmodified	_RSSIRRLSTRR_					0	0	0		ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	694.3502075076103	2	694.421282	1386.82801	2.2314	0.0015495	0.10943	7.5994E-05	2.3408	0.0016255	694.420706946087	82.896	1.2911	83.166	82.634	83.925	0.27029					82	41	3	0	0	0	0.14606	1	34935	34935		6.6304	2.1015	1	1384600			29970	5437	14870	14929	34377	34377					0.1500706061137862
RSSKLGLPGQ	10	Unmodified	_RSSKLGLPGQ_					0	0	0		ENST00000305798.7_1_4:99579386-99579464:-|nuORF	ENST00000305798.7_1_4:99579386-99579464:-|nuORF	ENST00000305798.7_1_4:99579386-99579464:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2068969607353	3	348.204974	1041.59309	-0.46992	-0.00016363	4.149	0.0014447	3.6791	0.0012811	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.88916	1	12809	12809		2.6312	0.13275	1	6459500			29971	5776	14871	14930	34378	34378					0.073959500831279
RSSKLTEHKKL	11	Unmodified	_RSSKLTEHKKL_					0	0	0		ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8970214724541	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0366	3	34729	34729;34885;35080		1.1933	0	1	6935600			29972	5000	14872	14931	34379;34380;34381	34379					0.12807513162874784
RSSKLTEHKKL	11	Unmodified	_RSSKLTEHKKL_					0	0	0		ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8975707888603	2	663.896243	1325.77793	2.1919	0.0014552	-0.51518	-0.00034203	1.6767	0.0011131	663.8957978467892	82.842	0.67295	83.113	82.695	83.368	0.27029					64	21	4	0	0	0	1.0214	1	34713	34713		2.4985	0	1	4141500			29973	5000	14872	14931	34382	34382					0.12807513162874784
RSSKLTEHKKL	11	Unmodified	_RSSKLTEHKKL_					0	0	0		ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	ENSG00000197372|ENST00000359788|ZNF675	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8973876833916	2	663.896243	1325.77793	2.3028	0.0015288	-0.35089	-0.00023295	1.952	0.0012959	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0214	1	35312	35312		2.4985	0	1	5935800			29974	5000	14872	14931	34383	34383					0.12807513162874784
RSSKRNLRKSR	11	Unmodified	_RSSKRNLRKSR_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1;ENST00000462916.1_1_15:30024631-30025027:-|nuORF;TJP1|p.P631Afs*15|1|0.07|ENSG00000104067|chr15:29732661-29732662|-/GTGATGCCACTGAGATGGCACCTGTCAAAAGAGC|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	694.4224731326103	2	694.421282	1386.82801	1.4089	0.00097839	2.3927	0.0016616	3.8017	0.00264	694.4227351887042	84.433	0.89345	85.592	85.224	86.118	1.159					35	28	2	0	0	0	0.14606	1	35539	35539		1.0715	0	1	3413400			29975	1449	14873	14932	34384	34384					0.15007060611401357
RSSKRNLRKSR	11	Unmodified	_RSSKRNLRKSR_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1;ENST00000462916.1_1_15:30024631-30025027:-|nuORF;TJP1|p.P631Afs*15|1|0.07|ENSG00000104067|chr15:29732661-29732662|-/GTGATGCCACTGAGATGGCACCTGTCAAAAGAGC|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	694.4225341677666	2	694.421282	1386.82801	1.5588	0.0010825	1.3806	0.00095874	2.9394	0.0020412	694.4221814776873	84.235	1.1503	85.831	85.338	86.488	1.5962					62	37	2	0	0	0	1.0366	1	35357	35357		1.1933	0	1	5297400			29976	1449	14873	14932	34385	34385					0.15007060611401357
RSSLKNLTFR	10	Unmodified	_RSSLKNLTFR_					0	0	0			REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3563720583916	2	611.356754	1220.69895	1.6593	0.0010144	-0.21707	-0.00013271	1.4423	0.00088174	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.89803	3	32917	32917;33122;33203		1.4819	0	1	10904000	+		29977	15697	14874	14933	34386;34387;34388	34386					0.09743285928561818
RSSLKNLTFR	10	Unmodified	_RSSLKNLTFR_					0	0	0			REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	REV__tr|A0A7D6ZRY3|A0A7D6ZRY3_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13965PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3580810427666	2	611.356754	1220.69895	1.8236	0.0011148	-0.11816	-7.2239E-05	1.7054	0.0010426	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.89803	1	32878	32878		1.4819	0	1	5176900	+		29978	15697	14874	14933	34389	34389					0.09743285928561818
RSSLRVLRH	9	Unmodified	_RSSLRVLRH_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3442870974541	2	562.343981	1122.67341	1.2972	0.0007295	-0.025614	-1.4404E-05	1.2716	0.0007151	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.83753	2	30192	30192;30233		1.8442	0.36234	1	3980400			29979	4895;15952	14875	14934	34390;34391	34390					0.11697856196838075
RSSLRVLRH	9	Unmodified	_RSSLRVLRH_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3444091677666	2	562.343981	1122.67341	1.8758	0.0010548	-0.053188	-2.991E-05	1.8226	0.0010249	562.3436917925029	72.52	2.0309	72.845	71.85	73.881	0.32494					136	64	3	0	0	0	0.83753	4	30038	30038;30088;30422;30467		1.8442	1.8442	1	7864900			29980	4895;15952	14875	14934	34392;34393;34394;34395	34392					0.11697856196838075
RSSMVFVKLK	10	Unmodified	_RSSMVFVKLK_					0	0	0		tr|A0A7D7A4G8|A0A7D7A4G8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01670PE=4SV=1	tr|A0A7D7A4G8|A0A7D7A4G8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01670PE=4SV=1	tr|A0A7D7A4G8|A0A7D7A4G8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8569213747978	2	597.855001	1193.69545	2.1441	0.0012818	1.601	0.00095717	3.7451	0.002239	597.8558383514289	73.728	0.55849	73.728	73.521	74.079	0					33	17	2	0	0	0	0.89803	1	30694	30694		1.4819	0	1	852440			29981	17287	14876	14935	34396	34396					0.10634899830392897
RSSPAPLLWKK	11	Unmodified	_RSSPAPLLWKK_					0	0	0		chr16:35748837-35755379|186|42.2|0.01|12.2|+|1|LINC02167,LINC02167|1	chr16:35748837-35755379|186|42.2|0.01|12.2|+|1|LINC02167,LINC02167|1	chr16:35748837-35755379|186|42.2|0.01|12.2|+|1|LINC02167,LINC02167|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8826782107353	2	641.885147	1281.75574	1.4587	0.0009363	-3.3931	-0.002178	-1.9345	-0.0012417	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0214	1	33636	33636		2.4985	1.0166	1	9116700			29982	211	14877	14936	34397	34397					0.1261333348509197
RSSRLRKTF	9	Unmodified	_RSSRLRKTF_					0	0	0			REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8441039919853	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.83753	2	31338	31338;31388		1.8442	0	1	9020800	+		29983	13940	14878	14937	34398;34399	34398					0.10422436476960684
RSSRLRKTF	9	Unmodified	_RSSRLRKTF_					0	0	0			REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8443481326103	2	575.843813	1149.67307	2.4428	0.0014067	-1.0723	-0.00061749	1.3705	0.00078921	575.8429155797212	74.786	2.1061	75.11	74.169	76.275	0.32463					197	66	4	0	0	0	0.83753	3	31200	31200;31291;31408		1.8442	0	1	9924500	+		29984	13940	14878	14937	34400;34401;34402	34400					0.10422436476960684
RSSRLRKTF	9	Unmodified	_RSSRLRKTF_					0	0	0			REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8440429568291	2	575.843813	1149.67307	2.7687	0.0015943	-0.7759	-0.0004468	1.9928	0.0011475	575.8432705671981	75.07	0.68332	76.851	76.513	77.196	1.7817					53	21	3	0	0	0	0.70108	1	31426	31426		7.2892	1.5574	1	2018100	+		29985	13940	14878	14937	34403	34403					0.10422436476960684
RSSRLRKTF	9	Unmodified	_RSSRLRKTF_					0	0	0			REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	REV__ENST00000566445.5_1_16:75642811-75646269:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	575.843813	1149.67307	2.7687	0.0015943	-0.7759	-0.0004468	1.9928	0.0011475	575.8432705671981	75.07	0.68332	76.851	76.513	77.196	1.7817	0.2642	-8.2973E-05	NaN	7.2892	53	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2018100	+		29986	13940	14878	14937							0.10422436476960684
RSSTVRRKQRP	11	Unmodified	_RSSTVRRKQRP_					0	0	0			REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9100829958916	2	685.908008	1369.80146	2.7523	0.0018878	0.75516	0.00051797	3.5075	0.0024058	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	1.0366	3	35497	35497;35549;35650		1.1933	0	1	4137900	+		29987	14095	14879	14938	34404;34405;34406	34404					0.13135371720068179
RSSTVRRKQRP	11	Unmodified	_RSSTVRRKQRP_					0	0	0			REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9097167849541	2	685.908008	1369.80146	2.4966	0.0017124	1.2589	0.00086351	3.7555	0.0025759	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	1.0366	1	35548	35548		1.1933	0	1	4704100	+		29988	14095	14879	14938	34407	34407					0.13135371720068179
RSSTVRRKQRP	11	Unmodified	_RSSTVRRKQRP_					0	0	0			REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	REV__ENST00000596989.1_1_19:23491864-23578234:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.9088012576103	2	685.908008	1369.80146	1.6306	0.0011185	1.2264	0.00084123	2.8571	0.0019597	685.9088144080557	84.208	1.3885	85.817	85.138	86.527	1.6088					100	45	3	0	0	0	1.0366	2	35088	35088;35355		1.1933	0	1	6001400	+		29989	14095	14879	14938	34408;34409	34408					0.13135371720068179
RSSVLKADTL	10	Unmodified	_RSSVLKADTL_					0	0	0			REV__tr|A0A553SLT7|A0A553SLT7_NIACIArsRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21215PE=4SV=1	REV__tr|A0A553SLT7|A0A553SLT7_NIACIArsRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21215PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3175536990166	2	545.316763	1088.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.588	1	72.913	72.413	73.413	0.32494								0	0	0	0.6607	1	30370	30370		3.2813	0.28607	1		+		29990	14996	14880	14939	34410	34410					0.07820799534761136
RSTELPKTHI	10	Unmodified	_RSTELPKTHI_					0	0	0		nc|ENSG00000139218|Q99590-2|SCAF11;ENSG00000139218|ENST00000369367|SCAF11	nc|ENSG00000139218|Q99590-2|SCAF11	nc|ENSG00000139218|Q99590-2|SCAF11	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5596801638603	3	394.559417	1180.65642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.89	1	112.89	112.39	113.39	0								0	0	0	0.66017	1	48789	48789		4.1895	0	1				29991	2870	14881	14940	34411	34411					0.0733189080037846
RSVGGSGG	8	Unmodified	_RSVGGSGG_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-5|LMNA;nc|ENSG00000160789|P02545-4|LMNA;ENST00000496738.5_1_1:156108227-156108894:+|nuORF	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.6732055544853	2	338.672277	675.330001	-1.5103	-0.00051151	3.4279	0.0011609	1.9176	0.00064943	338.67332342852626	76.984	1.1596	76.984	76.373	77.533	0					77	36	4	0	0	0	0.88587	1	31977	31977		5.2307	0	1	2788900			29992	3576	14882	14941	34412	34412					-0.020650455818440605
RSVQHRHFR	9	Unmodified	_RSVQHRHFR_					0	0	0		ENSG00000181523|ENST00000326317|SGSH	ENSG00000181523|ENST00000326317|SGSH	ENSG00000181523|ENST00000326317|SGSH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.8396484255791	2	611.836854	1221.65916	2.4849	0.0015204	2.1407	0.0013098	4.6257	0.0028302	611.838315691644	87.023	0.9509	87.267	86.576	87.527	0.24387					261	37	8	0	0	0	0.85019	1	36389	36389		0.52476	0.066424	1	264290000			29993	4579	14883	14942	34413	34413					0.05719203768535408
RSVRRRHLL	9	Unmodified	_RSVRRRHLL_					0	0	0		ENST00000475924.5_1_22:39052689-39064138:+|nuORF	ENST00000475924.5_1_22:39052689-39064138:+|nuORF	ENST00000475924.5_1_22:39052689-39064138:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2548705935478	3	398.254773	1191.74249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.61	1	55.61	55.11	56.11	0								0	0	0	0.42693	1	23163	23163		0.96228	0.33545	1				29994	6780	14884	14943	34414	34414					0.1542894021642951
RSWRWRWRLL	10	Unmodified	_RSWRWRWRLL_					0	0	0		ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	ENST00000414613.1_1_2:61164392-61164575:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.9366943240166	2	757.933828	1513.8531	3.6589	0.0027732	0.048814	3.6998E-05	3.7078	0.0028102	758.4361656052151	86.373	0.53951	87.92	87.663	88.203	1.547					120	19	8	0	0	0	0.89803	1	36391	36391		0	0	1	43001000			29995	6397	14885	14944	34415	34415					0.11673160204645683
RTARAKGL	8	Unmodified	_RTARAKGL_					0	0	0		tr|A0A553SGG8|A0A553SGG8_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10850PE=3SV=1	tr|A0A553SGG8|A0A553SGG8_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10850PE=3SV=1	tr|A0A553SGG8|A0A553SGG8_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10850PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7759887576103	2	436.774868	871.535184	2.8249	0.0012339	0.18781	8.2029E-05	3.0127	0.0013159	436.7747897649355	72.328	1.0203	73.658	73.361	74.381	1.3297					100	32	6	0	0	0	0.89181	1	30447	30447		0.6015	0	1	160180000			29996	16109	14886	14945	34416	34416					0.09427732948381617
RTARATQKVF	10	Unmodified	_RTARATQKVF_					0	0	0		ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	ENST00000406386.7_1_22:38170154-38170496:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3449584841728	2	589.343646	1176.67274	3.5158	0.002072	-2.0311	-0.001197	1.4848	0.00087503	589.3424136385491	73.664	1.3618	74.982	74.526	75.888	1.318					88	43	3	0	0	0	0.86043	1	30932	30932		5.7319	0.50118	1	3045500			29997	6363	14887	14946	34417	34417					0.09147016757128767
RTFFYWRLRRL	11	Unmodified	_RTFFYWRLRRL_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MSMS	GG20161007_CRH_Patient100_W632_01	3	807.4655639529228	2	807.462419	1612.91028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.72	1	113.9	113.4	114.4	0.17579								0	0	0	0.63775	1	49296	49296		0.26902	0.26902	1				29998	5477	14888	14947	34418	34418					0.12834582690334173
RTGLAPPLVA	10	Unmodified	_RTGLAPPLVA_					0	0	0			REV__ENST00000419218.5_1_3:49507805-49526111:+|nuORF	REV__ENST00000419218.5_1_3:49507805-49526111:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.2070800662041	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.367	1	91.349	90.849	91.849	0.98157								0	0	0	0.66227	1	38074	38074		0.62683	0	1		+		29999	12965	14889	14948	34419	34419					0.10006039576853709
RTGLRIWM	8	Unmodified	_RTGLRIWM_					0	0	0			REV__ENST00000489944.1_1_1:151107047-151107277:-|nuORF	REV__ENST00000489944.1_1_1:151107047-151107277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2938720583916	2	516.792204	1031.56985	1.7203	0.00088902	-0.2541	-0.00013132	1.4662	0.00075771	517.2931510508229	68.343	2.2893	68.665	67.558	69.847	0.32224					103	72	2	0	0	0	0.87572	1	29062	29062		11.64	0	1	867210	+		30000	13417	14890	14949	34420	34420					0.05533232764787499
RTGSLTFK	8	Unmodified	_RTGSLTFK_					0	0	0		ENST00000583778.1_1_17:80406944-80408606:-|nuORF;ENST00000585044.5_1_17:80406944-80407265:-|nuORF	ENST00000583778.1_1_17:80406944-80408606:-|nuORF	ENST00000583778.1_1_17:80406944-80408606:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2603942751884	2	455.261259	908.507966	3.8035	0.0017316	-3.5763	-0.0016282	0.22716	0.00010342	455.25975349778895	90.961	0.41137	92.327	92.124	92.535	1.366					21	12	2	0	0	0	0.89124	1	38324	38324		1.8442	0	1	1021800			30001	7443	14891	14950	34421	34421					0.050052046173163944
RTIDIQVYNE	10	Unmodified	_RTIDIQVYNE_					0	0	0			REV__ENSG00000061676|ENST00000361354|NCKAP1	REV__ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.5492736697197	3	417.550698	1249.63027	0.57501	0.0002401	-2.9301	-0.0012235	-2.3551	-0.00098338	417.54953501813117	68.9	0.40474	68.9	68.673	69.078	0					28	12	4	0	0	0	0.84426	1	28688	28688		7.4771	1.6089	1	1181500	+		30002	8653	14892	14951	34422	34422					0.01543576838230365
RTIVPKLRKLA	11	Unmodified	_RTIVPKLRKLA_					0	0	0			REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|71|3|sense	REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|71|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	432.2960082888603	3	432.294235	1293.86087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.46	1	104.52	104.02	105.02	0.056801								0	0	0	0.63775	1	44055	44055		0.40827	0.31342	1		+		30003	14193	14893	14952	34423	34423					0.22569874681562396
RTIVPKLRKLA	11	Unmodified	_RTIVPKLRKLA_					0	0	0			REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|71|3|sense	REV__HERVH-int_dup395|chr1:229174781-229177850:+|1.6476935486843904|0.2234293350488721|2.88|410.0|71|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.2966796755791	3	432.294235	1293.86087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.42	1	104.58	104.08	105.08	0.16055								0	0	0	0.63775	1	44228	44228		0.40827	0.26837	1		+		30004	14193	14893	14952	34424	34424					0.22569874681562396
RTKKKKKKKK	10	Unmodified	_RTKKKKKKKK_					0	0	0		ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9685546755791	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.4	1	106.57	106.07	107.07	0.16174								0	0	0	0.66243	1	45503	45503		0.35063	0	1				30005	6067	14894	14953	34425	34425					0.2810955632680816
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3096496462822	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.01	1	104.18	103.68	104.68	0.1731								0	0	0	0.66264	1	43925	43925		0	0	1		+		30006	13003	14895	14954	34426	34426					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3092224001884	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.05	1	105.21	104.71	105.71	0.16679								0	0	0	0.66264	1	44594	44594		0	0	1		+		30007	13003	14895	14954	34427	34427					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3089782595634	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.15	1	105.32	104.82	105.82	0.16679								0	0	0	0.66264	1	44661	44661		0	0	1		+		30008	13003	14895	14954	34428	34428					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3097717165947	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.24	1	105.41	104.91	105.91	0.16679								0	0	0	0.66264	1	44717	44717		0	0	1		+		30009	13003	14895	14954	34429	34429					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3098022341728	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.35	1	105.51	105.01	106.01	0.16679								0	0	0	0.66264	1	44784	44784		0	0	1		+		30010	13003	14895	14954	34430	34430					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3096496462822	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.44	1	105.6	105.1	106.1	0.16679								0	0	0	0.66264	1	44847	44847		0	0	1		+		30011	13003	14895	14954	34431	34431					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3097411990166	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.54	1	105.7	105.2	106.2	0.16679								0	0	0	0.66264	1	44912	44912		0	0	1		+		30012	13003	14895	14954	34432	34432					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3086730837822	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.26	1	108.42	107.92	108.92	0.15795								0	0	0	0.66264	1	46701	46701		0	0	1		+		30013	13003	14895	14954	34433	34433					0.2731075157826126
RTKKKKKKLI	10	Unmodified	_RTKKKKKKLI_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3081542849541	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.37	1	108.52	108.02	109.02	0.15795								0	0	0	0.66264	1	46767	46767		0	0	1		+		30014	13003	14895	14954	34434	34434					0.2731075157826126
RTKLAAAA	8	Unmodified	_RTKLAAAA_					0	0	0			REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	801.4964477419853	1	801.494113	800.486836	2.7559	0.0022088	-0.31107	-0.00024932	2.4448	0.0019595	801.4936351583096	107.89	0.20245	107.94	107.82	108.02	0.052452					30	10	4	0	0	0	0.89198	2	46233	46233;46313		0	0	1	408900000	+		30015	13230	14896	14955	34435;34436	34435					0.07861239308442691
RTKLAAAA	8	Unmodified	_RTKLAAAA_					0	0	0			REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	801.4943725466728	1	801.494113	800.486836	2.7368	0.0021936	-0.53354	-0.00042763	2.2033	0.0017659	801.4934934193668	107.82	0.19899	107.98	107.9	108.1	0.15781					33	12	4	0	0	0	0.89198	2	46464	46464;46533		0	0	1	657010000	+		30016	13230	14896	14955	34437;34438	34437					0.07861239308442691
RTKLAAAA	8	Unmodified	_RTKLAAAA_					0	0	0			REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	REV__ENST00000464917.5_1_1:12676626-12676731:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	801.4963256716728	1	801.494113	800.486836	2.8958	0.002321	-1.3095	-0.0010496	1.5863	0.0012714	801.4927604773582	107.84	0.22852	108	107.86	108.09	0.15795					32	12	4	0	0	0	0.89198	1	46398	46398		0	0	1	810380000	+		30017	13230	14896	14955	34439	34439					0.07861239308442691
RTKRALWHKK	10	Unmodified	_RTKRALWHKK_					0	0	0			REV__ENSG00000184898|ENST00000331426|RBM43	REV__ENSG00000184898|ENST00000331426|RBM43	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7069274783134	4	331.708466	1322.80476	-1.7198	-0.00057047	-2.5995	-0.00086229	-4.3193	-0.0014328	331.7075433804945	44.888	0.87029	44.888	44.38	45.25	0					52	27	2	0	0	0	0.88278	1	18624	18624		3.3196	0	1	4015700	+		30018	11433	14897	14956	34440	34440					0.15626666564708103
RTLDNLINPP	10	Unmodified	_RTLDNLINPP_					0	0	0		nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-4|RALGAPA1;nc|ENSG00000174373|Q6GYQ0|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-7|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-5|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-6|RALGAPA1;nc|ENSG00000174373|Q6GYQ0-2|RALGAPA1;ENSG00000174373|ENST00000680220|RALGAPA1	nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1	nc|ENSG00000174373|Q6GYQ0-3|RALGAPA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8251830935478	2	576.822212	1151.62987	2.7561	0.0015898	2.7411	0.0015811	5.4972	0.0031709	576.8240316002214	76.279	0.40913	78.046	77.813	78.222	1.7672					38	12	4	0	0	0	0.65659	1	31982	31982		20.415	2.0414	1	6895200			30019	4329	14898	14957	34441	34441					0.06012201909038595
RTLSKDLLVN	10	Unmodified	_RTLSKDLLVN_					0	0	0			REV__ENSG00000178075|ENST00000358160|GRAMD1C	REV__ENSG00000178075|ENST00000358160|GRAMD1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8452636599541	2	579.845687	1157.67682	2.493	0.0014456	-0.12504	-7.2504E-05	2.368	0.001373	579.8456136579196	88.242	0.4658	88.477	88.291	88.756	0.2347					41	14	4	0	0	0	0.88314	1	37024	37024		3.2813	0.54611	1	5435500	+		30020	11237	14899	14958	34442	34442					0.10429061460172306
RTNGSGSG	8	Unmodified	_RTNGSGSG_					0	0	0		ENSG00000145868|ENST00000340253|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	735.3398925662041	1	735.338006	734.33073	1.438	0.0010574	0.2813	0.00020685	1.7193	0.0012643	735.3386638269765	43.345	0.44334	45.289	45.041	45.485	1.9438					27	14	3	0	0	0	0.89176	1	18110	18110		0.79363	0.10326	1	1272900			30021	3127	14900	14959	34443	34443					-0.04706250932792955
RTNLLVHS	8	Unmodified	_RTNLLVHS_					0	0	0		tr|A0A553SRP5|A0A553SRP5_NIACIAminoglycosidephosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01325PE=4SV=1	tr|A0A553SRP5|A0A553SRP5_NIACIAminoglycosidephosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01325PE=4SV=1	tr|A0A553SRP5|A0A553SRP5_NIACIAminoglycosidephosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01325PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	470.2726928591728	2	470.272158	938.529764	2.3235	0.0010927	-0.25949	-0.00012203	2.064	0.00097066	470.27188631660033	74.999	0.40849	74.999	74.745	75.154	0					30	12	3	0	0	0	0.8909	1	31162	31162		2.0598	0	1	3648800			30022	16572	14901	14960	34444	34444					0.058040093658974
RTPRRWRRCWA	11	Unmodified	_RTPRRWRRCWA_					0	0	0		ENST00000308664.10_1_12:110719337-110719667:+|nuORF	ENST00000308664.10_1_12:110719337-110719667:+|nuORF	ENST00000308664.10_1_12:110719337-110719667:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1543.835009753704	1	1543.82876	1542.82149	2.7973	0.0043186	0.57792	0.00089221	3.3752	0.0052108	1543.8333220739967	39.203	0.11894	39.511	39.455	39.574	0.30857					5	3	2	0	0	0	1.0405	1	16495	16495		0	0	1	660790			30023	5790	14902	14961	34445	34445					0.07178844179020416
RTQLEARRLL	10	Unmodified	_RTQLEARRLL_					0	0	0			REV__ENST00000374723.5_1_9:108007154-108061535:+|nuORF	REV__ENST00000374723.5_1_9:108007154-108061535:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3822509646416	2	628.383303	1254.75205	1.2793	0.0008039	-0.45253	-0.00028436	0.82678	0.00051954	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.8882	1	32612	32612		2.7352	0.45242	1	6175000	+		30024	12706	14903	14962	34446	34446					0.1348666371127365
RTRLGGRRRQ	10	Unmodified	_RTRLGGRRRQ_					0	0	0		ENST00000437766.5_1_19:13227157-13227283:-|nuORF	ENST00000437766.5_1_19:13227157-13227283:-|nuORF	ENST00000437766.5_1_19:13227157-13227283:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3831664919853	2	628.38196	1254.74937	1.1909	0.00074836	2.0351	0.0012788	3.2261	0.0020272	628.3833030097504	79.502	0.67828	81.219	80.765	81.444	1.7167					46	21	3	0	0	0	0.89803	1	33198	33198		1.4819	0.15237	1	1388400			30025	6539	14904	14963	34447	34447					0.13218253096965782
RTRPRTIRR	9	Unmodified	_RTRPRTIRR_					0	0	0			REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	404.2493774294853	3	404.590045	1210.7483	-0.39252	-0.00015881	-0.51645	-0.00020895	-0.90897	-0.00036776	404.92407592499535	24.135	0.59119	24.135	23.87	24.461	0					31	18	2	0	0	0	0.11941	1	10040	10040		0.23584	0	1	719060	+		30026	12805	14905	14964	34448	34448					0.15136038728041967
RTRPRTIRR	9	Unmodified	_RTRPRTIRR_					0	0	0			REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.2530090212822	3	404.590045	1210.7483	0.9224	0.00037319	-2.4291	-0.00098278	-1.5067	-0.00060959	404.58894830098524	23.79	0.49467	24.032	23.793	24.288	0.24251					28	15	2	0	0	0	0.11819	1	9969	9969		2.7352	0	1	563830	+		30027	12805	14905	14964	34449	34449					0.15136038728041967
RTRPRTIRR	9	Unmodified	_RTRPRTIRR_					0	0	0			REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1788513064384	3	404.590045	1210.7483	0.37139	0.00015026	-3.2442	-0.0013126	-2.8728	-0.0011623	404.5885154853439	21.759	0.56204	23.375	23.079	23.641	1.6158					39	18	3	0	0	0	0.11941	1	9176	9176		1.0715	0	1	1261600	+		30028	12805	14905	14964	34450	34450					0.15136038728041967
RTRPRTIRR	9	Unmodified	_RTRPRTIRR_					0	0	0			REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	404.590045	1210.7483	0.80337	0.00032504	-2.8234	-0.0011423	-2.02	-0.00081729	404.58877742944645	22.624	0.43109	23.838	23.609	24.04	1.2145	-0.16363	-0.001234	NaN	2.7352	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629800	+		30029	12805	14905	14964							0.15136038728041967
RTRRLHILPP	10	Unmodified	_RTRRLHILPP_					0	0	0		ENST00000489156.1_1_6:152623240-152623372:-|nuORF	ENST00000489156.1_1_6:152623240-152623372:-|nuORF	ENST00000489156.1_1_6:152623240-152623372:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.8975097537041	2	629.89638	1257.77821	2.7452	0.0017292	-2.1074	-0.0013274	0.6378	0.00040175	629.894459469683	105.9	0.11816	106.06	106	106.11	0.16679					11	5	3	0	0	0	0.85604	1	45164	45164		6.2058	2.6093	1	44006000			30030	6893	14906	14965	34451	34451					0.1596297767341639
RTRRLHILPP	10	Unmodified	_RTRRLHILPP_					0	0	0		ENST00000489156.1_1_6:152623240-152623372:-|nuORF	ENST00000489156.1_1_6:152623240-152623372:-|nuORF	ENST00000489156.1_1_6:152623240-152623372:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	629.89638	1257.77821	1.5293	0.00096333	-4.5285	-0.0028525	-2.9992	-0.0018892	629.8941255142269	105.99	0.09726	105.99	105.93	106.03	0	-0.057479	-0.0016989	NaN	6.2058	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6901100			30031	6893	14906	14965							0.1596297767341639
RTRRVLLFVRR	11	Unmodified	_RTRRVLLFVRR_					0	0	0			REV__ENSG00000253352|ENST00000644773|TUG1	REV__ENSG00000253352|ENST00000644773|TUG1	MSMS	GG20161007_CRH_Patient100_W632_02	4	736.9133788943291	2	736.47586	1470.93717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.256	1	98.513	98.013	99.013	0.25636								0	0	0	0.63775	1	41346	41346		0	0	1		+		30032	11956	14907	14966	34452	34452					0.22053691301493927
RTSSPRGSS	9	Unmodified	_RTSSPRGSS_					0	0	0		ENST00000450717.7_1_19:11144862-11145710:+|nuORF	ENST00000450717.7_1_19:11144862-11145710:+|nuORF	ENST00000450717.7_1_19:11144862-11145710:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7397643923759	2	467.73868	933.462806	2.0444	0.00095626	0.49034	0.00022935	2.5348	0.0011856	467.7384286899636	49.832	4.4653	51.809	48.479	52.944	1.9772					262	144	3	0	0	0	0.6486	1	20435	20435		9.3831	0.78985	1	3535400			30033	6607	14908	14967	34453	34453					-0.006586459158484104
RTTFIGTSE	9	Unmodified	_RTTFIGTSE_					0	0	0			REV__ENST00000503632.1_1_19:47061900-47062413:+|nuORF	REV__ENST00000503632.1_1_19:47061900-47062413:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	506.2595092654228	2	506.258914	1010.50327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.29	1	100.36	99.862	100.86	0.072716								0	0	0	0.3709	1	41987	41987		11.64	0.81637	1		+		30034	13518	14909	14968	34454	34454					-0.0015572431607324688
RTTLLGGK	8	Unmodified	_RTTLLGGK_					0	0	0		ENSG00000275183|ENST00000611161|LENG9;nc|ENSG00000275183|Q96B70|LENG9	ENSG00000275183|ENST00000611161|LENG9	ENSG00000275183|ENST00000611161|LENG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2652160525322	2	423.263802	844.513051	0.35418	0.00014991	3.1583	0.0013368	3.5124	0.0014867	423.26515074724665	107.87	0.15886	107.87	107.77	107.93	0					21	8	3	0	0	0	0.89051	1	46334	46334		2.3027	0	1	92249000			30035	5459	14910	14969	34455	34455					0.08457508479955322
RTTLLGGK	8	Unmodified	_RTTLLGGK_					0	0	0		ENSG00000275183|ENST00000611161|LENG9;nc|ENSG00000275183|Q96B70|LENG9	ENSG00000275183|ENST00000611161|LENG9	ENSG00000275183|ENST00000611161|LENG9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.2654907107353	2	423.263802	844.513051	3.0531	0.0012923	0.74022	0.00031331	3.7933	0.0016056	423.2640902011162	107.83	0.16151	107.89	107.8	107.97	0.052452					22	8	3	0	0	0	0.89051	1	46226	46226		2.3027	0	1	89403000			30036	5459	14910	14969	34456	34456					0.08457508479955322
RTTTKLIKD	9	Unmodified	_RTTTKLIKD_					0	0	0			REV__ENSG00000176177|ENST00000325157|ENTHD1	REV__ENSG00000176177|ENST00000325157|ENTHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.2208129763603	3	359.220513	1074.63971	2.3057	0.00082824	-1.2626	-0.00045355	1.0431	0.00037469	359.2202841355761	86.024	0.51894	86.276	86.037	86.556	0.25227					44	16	4	0	0	0	0.847	1	36022	36022		0.96228	0	1	8638200	+		30037	11173	14911	14970	34457	34457					0.10537389914429696
RTTWVYSI	8	Unmodified	_RTTWVYSI_					0	0	0		ENSG00000104814|ENST00000396857|MAP4K1;nc|ENSG00000104814|Q92918|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	ENSG00000104814|ENST00000396857|MAP4K1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.8063842654228	2	513.274367	1024.53418	2.8855	0.0014811	-1.5695	-0.00080557	1.3161	0.0006755	513.2741977879583	80.494	0.39882	81.745	81.513	81.912	1.2512					19	12	2	0	0	0	2.3239	1	33746	33746		5.2307	0	1	1662100			30038	1477	14912	14971	34458	34458					0.02289473788800933
RTVPMTDLSTM	11	Unmodified	_RTVPMTDLSTM_					0	0	0			REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3093139529228	2	626.307223	1250.59989	0.012306	7.7072E-06	4.0925	0.0025632	4.1048	0.0025709	626.3095014837672	23.324	0.15417	24.975	24.93	25.085	1.6511					6	4	2	0	0	0	0.89436	1	9746	9746		10.151	0.76745	1	321240	+		30039	14238	14913	14972	34459	34459					-0.015382411428390697
RTVPMTDLSTM	11	Unmodified	_RTVPMTDLSTM_					0	0	0			REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	626.307223	1250.59989	0.74357	0.0004657	2.2699	0.0014216	3.0135	0.0018873	626.3087447709715	24.803	0.24656	25.045	24.925	25.171	0.24251	0.035358	-0.0015071	NaN	10.151	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274400	+		30040	14238	14913	14972							-0.015382411428390697
RTVPMTDLSTM	11	Unmodified	_RTVPMTDLSTM_					0	0	0			REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	REV__JAG1|p.D188Lfs*225|1|0.21|ENSG00000101384|chr20:10658600-10658601|-/AA|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	626.307223	1250.59989	0.012306	7.7072E-06	4.0925	0.0025632	4.1048	0.0025709	626.3095014837672	23.324	0.15417	24.975	24.93	25.085	1.6511	-0.035358	0.00077591	NaN	10.151	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321240	+		30041	14238	14913	14972							-0.015382411428390697
RTVWKYFVQL	10	Unmodified	_RTVWKYFVQL_					0	0	0		ENSG00000151414|ENST00000367385|NEK7;ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6	ENSG00000151414|ENST00000367385|NEK7	ENSG00000151414|ENST00000367385|NEK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	670.3784667849541	2	670.379697	1338.74484	2.7042	0.0018128	-2.7289	-0.0018294	-0.02472	-1.6572E-05	670.3767022917589	61.743	0.37593	63.161	62.927	63.303	1.4177					25	11	3	0	0	0	0.72878	1	25875	25875		17.113	0.96379	1	1938200			30042	2071	14914	14973	34460	34460					0.08901931110835903
RTVWKYFVQL	10	Unmodified	_RTVWKYFVQL_					0	0	0		ENSG00000151414|ENST00000367385|NEK7;ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6	ENSG00000151414|ENST00000367385|NEK7	ENSG00000151414|ENST00000367385|NEK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	670.3779174685478	2	670.379697	1338.74484	2.0395	0.0013672	-1.8267	-0.0012246	0.21275	0.00014262	670.3778690421345	61.186	0.34018	63.151	62.973	63.313	1.9653					24	10	3	0	0	0	0.60583	1	25669	25669		22.736	3.3743	1	1735400			30043	2071	14914	14973	34461	34461					0.08901931110835903
RTVWKYFVQL	10	Unmodified	_RTVWKYFVQL_					0	0	0		ENSG00000151414|ENST00000367385|NEK7;ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6	ENSG00000151414|ENST00000367385|NEK7	ENSG00000151414|ENST00000367385|NEK7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	670.379697	1338.74484	2.2807	0.0015289	-4.5523	-0.0030517	-2.2716	-0.0015228	670.3766602040765	63.382	0.28425	63.382	63.24	63.524	0	0.1516	-0.002261	NaN	22.736	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	459600			30044	2071	14914	14973							0.08901931110835903
RTVWKYFVQL	10	Unmodified	_RTVWKYFVQL_					0	0	0		ENSG00000151414|ENST00000367385|NEK7;ENSG00000119408|ENST00000320246|NEK6;nc|ENSG00000119408|Q9HC98-3|NEK6;nc|ENSG00000119408|Q9HC98-4|NEK6;nc|ENSG00000119408|Q9HC98-2|NEK6	ENSG00000151414|ENST00000367385|NEK7	ENSG00000151414|ENST00000367385|NEK7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	670.379697	1338.74484	1.8191	0.0012195	-2.5354	-0.0016997	-0.71634	-0.00048022	670.3775029073503	62.898	0.31377	63.227	63.067	63.381	0.32974	-0.0029351	0.00044311	NaN	22.736	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381610			30045	2071	14914	14973							0.08901931110835903
RTWRRRRRMRR	11	Unmodified	_RTWRRRRRMRR_					0	0	0			REV__ENST00000281708.8_1_4:153271275-153332654:-|nuORF	REV__ENST00000281708.8_1_4:153271275-153332654:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	843.4984008669853	2	843.500741	1684.98693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.526	1	98.754	98.254	99.254	0.22776								0	0	0	0.63775	1	41478	41478		0	0	1		+		30046	12254	14915	14974	34462	34462					0.17183495758513345
RVAGVLAA	8	Unmodified	_RVAGVLAA_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	756.4739257693291	1	756.472649	755.465373	2.7286	0.0020641	-0.91348	-0.00069102	1.8152	0.0013731	756.4717271966417	103.92	0.16939	103.98	103.86	104.03	0.059502					10	8	2	0	0	0	0.89176	1	43718	43718		0.79363	0	1	95613000	+		30047	9026	14916	14975	34463	34463					0.07785854279734394
RVAGVLAA	8	Unmodified	_RVAGVLAA_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	756.472649	755.465373	2.7286	0.0020641	-0.91348	-0.00069102	1.8152	0.0013731	756.4717271966417	103.92	0.16939	103.98	103.86	104.03	0.059502	-0.04579	-0.00031816	NaN	0.79363	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	95613000	+		30048	9026	14916	14975							0.07785854279734394
RVAGVLAA	8	Unmodified	_RVAGVLAA_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	756.472649	755.465373	2.4885	0.0018825	-0.31652	-0.00023944	2.1719	0.001643	756.4719550363604	103.9	0.09845	104.06	104.01	104.11	0.16055	0.033433	0.00013342	NaN	0.79363	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56746000	+		30049	9026	14916	14975							0.07785854279734394
RVAGVLAA	8	Unmodified	_RVAGVLAA_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	756.472649	755.465373	2.7472	0.0020781	-0.49408	-0.00037376	2.2531	0.0017044	756.4718776839599	103.87	0.099365	104.04	103.99	104.09	0.1731	0.012357	-9.0275E-07	NaN	0.79363	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	62843000	+		30050	9026	14916	14975							0.07785854279734394
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2653076052666	3	427.26417	1278.77068	1.0355	0.00044245	1.6974	0.00072524	2.7329	0.0011677	427.26482516564323	42.65	1.0747	42.65	42.384	43.459	0					143	34	5	0	0	0	1.0224	3	17864	17864;18062;18151		2.4348	2.4348	1	51340000			30051	5295	14917	14976	34464;34465;34466	34464					0.14244502081464816
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2649719119072	3	427.26417	1278.77068	2.1191	0.00090541	0.99437	0.00042486	3.1135	0.0013303	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	1.0224	2	17755	17561;17755		2.4348	0.18206	1	48247000			30052	5295	14917	14976	34467;34468	34468					0.14244502081464816
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2653381228447	3	427.26417	1278.77068	2.3557	0.0010065	0.024621	1.052E-05	2.3803	0.001017	427.26411590084575	40.132	0.73301	41.442	41.086	41.819	1.3102					102	23	5	0	0	0	1.0224	2	16871	16732;16871		2.4348	0.18206	1	54439000			30053	5295	14917	14976	34469;34470	34470					0.14244502081464816
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7012512087822	4	320.699946	1278.77068	1.0696	0.00034303	1.2297	0.00039435	2.2993	0.00073738	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	1.0369	1	16768	16768		1.1098	1.1098	1	367210000			30054	5295	14917	14976	34471	34471					0.14244502081464816
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2651855349541	3	427.26417	1278.77068	2.3581	0.0010075	0.25042	0.00010699	2.6085	0.0011145	427.2641553664048	40.681	0.4704	42.007	41.834	42.305	1.3254					51	14	4	0	0	0	1.0224	1	17039	17039		2.4348	0.18206	1	26825000			30055	5295	14917	14976	34472	34472					0.14244502081464816
RVALRCRPLVP	11	Unmodified	_RVALRCRPLVP_					0	0	0		ENSG00000226650|ENST00000435029|KIF4B;KIF4A|p.C1088Lfs*26|1|0.31|ENSG00000090889|chrX:70417891-70417892|-/C|frameshift_variant;nc|ENSG00000090889|O95239-2|KIF4A;ENSG00000090889|ENST00000374403|KIF4A	ENSG00000226650|ENST00000435029|KIF4B	ENSG00000226650|ENST00000435029|KIF4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2654296755791	3	427.26417	1278.77068	1.7969	0.00076775	0.50159	0.00021431	2.2985	0.00098206	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	0.98969	3	16560	16511;16560;16597		4.4062	1.7749	1	44576000			30056	5295	14917	14976	34473;34474;34475	34474					0.14244502081464816
RVALVLPIA	9	Unmodified	_RVALVLPIA_					0	0	0			REV__ENSG00000186188|ENST00000371481|FFAR4	REV__ENSG00000186188|ENST00000371481|FFAR4	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.3224975466728	2	476.32112	950.627687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.65	104.15	105.15	0.16055								0	0	0	0.42693	1	44278	44278		2.0598	0	1		+		30057	11492	14918	14977	34476	34476					0.15039817961894641
RVAVHRVP	8	Unmodified	_RVAVHRVP_					0	0	0		nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENST00000561252.1_1_15:90768241-90768761:+|nuORF;ENST00000560993.1_1_15:90767112-90768514:+|nuORF	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2918273806572	2	467.290685	932.566818	3.5647	0.0016657	-0.57659	-0.00026944	2.9881	0.0013963	467.2903145019037	106.1	0.14078	106.27	106.19	106.33	0.16174					16	7	3	0	0	0	0.89051	1	45311	45311		2.3027	1.5091	1	37238000			30058	4728	14919	14978	34477	34477					0.09783725702322954
RVAVHRVP	8	Unmodified	_RVAVHRVP_					0	0	0		nc|ENSG00000185033|Q9NPR2-2|SEMA4B;ENSG00000185033|ENST00000411539|SEMA4B;ENST00000561252.1_1_15:90768241-90768761:+|nuORF;ENST00000560993.1_1_15:90767112-90768514:+|nuORF	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	nc|ENSG00000185033|Q9NPR2-2|SEMA4B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	467.290685	932.566818	3.3474	0.0015642	0.87509	0.00040892	4.2225	0.0019731	467.29103276772076	106.13	0.12294	106.29	106.23	106.35	0.15781	0.012481	0.00071476	NaN	2.3027	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48467000			30059	4728	14919	14978							0.09783725702322954
RVDAITLKHVK	11	Unmodified	_RVDAITLKHVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.7017700076103	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	1.0362	1	17820	17820		0.45452	0	1	296590000	+		30060	10496	14920	14979	34478	34478					0.14896718513818996
RVDAITLKHVK	11	Unmodified	_RVDAITLKHVK_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7006408572197	4	320.701578	1278.7772	1.1368	0.00036459	-3.5596	-0.0011416	-2.4227	-0.00077697	320.7013242248906	39.86	1.3301	41.722	41.092	42.422	1.8624					180	42	6	0	0	0	1.0362	1	16508	16508		0.45452	0	1	348870000	+		30061	10496	14920	14979	34479	34479					0.14896718513818996
RVDRWHHKRFL	11	Unmodified	_RVDRWHHKRFL_					0	0	0			REV__ENST00000590181.5_1_17:33310024-33316690:+|nuORF	REV__ENST00000590181.5_1_17:33310024-33316690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2935058474541	3	517.291887	1548.85383	2.4922	0.0012892	0.40905	0.0002116	2.9012	0.0015008	517.2931513510154	72.908	2.7248	73.233	72.797	75.522	0.32494					133	86	2	0	0	0	1.0388	1	31011	31011		0.50596	0	1	3363200	+		30062	8494	14921	14980	34480	34480					0.10135954853672047
RVDRWHHKRFL	11	Unmodified	_RVDRWHHKRFL_					0	0	0			REV__ENST00000590181.5_1_17:33310024-33316690:+|nuORF	REV__ENST00000590181.5_1_17:33310024-33316690:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2937499880791	3	517.291887	1548.85383	1.9035	0.00098469	0.99464	0.00051452	2.8982	0.0014992	517.2926794022103	39.706	0.92395	41.568	41.247	42.171	1.8624					108	29	6	0	0	0	1.0388	1	16663	16663		0.50596	0.09769	1	220690000	+		30063	8494	14921	14980	34481	34481					0.10135954853672047
RVEDILILP	9	Unmodified	_RVEDILILP_					0	0	0			REV__ENST00000587552.5_1_19:5696605-5708411:-|nuORF	REV__ENST00000587552.5_1_19:5696605-5708411:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	534.3334228396416	2	534.326599	1066.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.31	1	104.31	103.81	104.81	0								0	0	0	0.42693	1	43996	43996		1.8442	0	1		+		30064	14038	14922	14981	34482	34482					0.10799175545525941
RVEGPRKGH	9	Unmodified	_RVEGPRKGH_					0	0	0		ENST00000474947.1_1_7:100238307-100240397:-|nuORF;nc|ENSG00000106327|Q9UP52-3|TFR2;ENSG00000106327|ENST00000223051|TFR2	ENST00000474947.1_1_7:100238307-100240397:-|nuORF	ENST00000474947.1_1_7:100238307-100240397:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2989379763603	2	518.293956	1034.57336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.41	1	105.57	105.07	106.07	0.15859								0	0	0	0.42693	1	44894	44894		3.9444	1.6417	1				30065	1565	14923	14982	34483	34483					0.05745618863056734
RVEGPRKGH	9	Unmodified	_RVEGPRKGH_					0	0	0		ENST00000474947.1_1_7:100238307-100240397:-|nuORF;nc|ENSG00000106327|Q9UP52-3|TFR2;ENSG00000106327|ENST00000223051|TFR2	ENST00000474947.1_1_7:100238307-100240397:-|nuORF	ENST00000474947.1_1_7:100238307-100240397:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2972900271416	2	518.293956	1034.57336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.37	1	105.54	105.04	106.04	0.16679								0	0	0	0.42693	1	44802	44802		3.9444	0.3479	1				30066	1565	14923	14982	34484	34484					0.05745618863056734
RVEIKDVKLPV	11	Unmodified	_RVEIKDVKLPV_					0	0	0		ENSG00000148175|ENST00000286713|STOM	ENSG00000148175|ENST00000286713|STOM	ENSG00000148175|ENST00000286713|STOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	324.7070495486259	4	324.706594	1294.79727	1.1118	0.00036102	2.5169	0.00081724	3.6287	0.0011783	324.7074102871331	42.452	0.86642	44.373	43.827	44.694	1.9211					58	27	3	0	0	0	1.0365	1	17681	17681		1.2148	0.10508	1	2398900			30067	3199	14924	14983	34485	34485					0.16166469453787613
RVFKLLFIM	9	Unmodified	_RVFKLLFIM_					0	0	0			REV__ENST00000557060.1_1_14:64540716-64565614:+|nuORF	REV__ENST00000557060.1_1_14:64540716-64565614:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8611328005791	2	583.859555	1165.70456	3.8308	0.0022367	-1.633	-0.00095345	2.1978	0.0012832	583.8585462149618	81.816	0.50229	83.487	83.264	83.766	1.67					26	15	2	0	0	0	0.84963	1	34364	34364		0.6015	0	1	1188600	+		30068	13874	14925	14984	34486	34486					0.1283329318671349
RVFLGKIP	8	Unmodified	_RVFLGKIP_					0	0	0		ENST00000314328.13_1_22:24666923-24672729:+|nuORF	ENST00000314328.13_1_22:24666923-24672729:+|nuORF	ENST00000314328.13_1_22:24666923-24672729:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1349059939384	3	310.535884	928.585822	1.028	0.00031922	1.6513	0.00051278	2.6793	0.000832	310.5364899615344	51.001	1.1223	51.329	50.637	51.759	0.32824					58	35	2	0	0	0	2.3239	1	21543	21543		0	0	1	1902600			30069	5821	14926	14985	34487	34487					0.1186726227338113
RVFPYSVFY	9	Unmodified	_RVFPYSVFY_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3072997927666	2	589.305667	1176.59678	2.9497	0.0017383	0.63277	0.0003729	3.5824	0.0021111	589.305121224334	62.617	0.54757	64.03	63.583	64.131	1.4134					52	17	4	0	0	0	0.10473	3	26213	26167;26213;26265		47.749	24.727	1	7469000			30070	2962	14927	14986	34488;34489;34490	34489					0.015546198570064007
RVFPYSVFY	9	Unmodified	_RVFPYSVFY_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3119994997978	2	589.305667	1176.59678	2.9099	0.0017148	3.3731	0.0019878	6.283	0.0037026	589.3083586673434	63.078	0.47135	64.492	64.344	64.816	1.4134					34	14	3	0	0	0	0.17276	1	26448	26448		36.127	13.391	1	2971300			30071	2962	14927	14986	34491	34491					0.015546198570064007
RVFPYSVFY	9	Unmodified	_RVFPYSVFY_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3069946169853	2	589.305667	1176.59678	2.9377	0.0017312	1.3096	0.00077176	4.2474	0.002503	589.3057586873524	62.108	0.55767	64.066	63.562	64.12	1.9571					51	17	4	0	0	0	0.044893	4	26016	25918;25967;26016;26069		71.922	41.697	1	5550300			30072	2962	14927	14986	34492;34493;34494;34495	34494					0.015546198570064007
RVFPYSVFY	9	Unmodified	_RVFPYSVFY_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3109619021416	2	589.305667	1176.59678	2.7484	0.0016196	2.6904	0.0015855	5.4388	0.0032051	589.308984906356	62.487	0.52988	64.432	64.345	64.875	1.9444					35	16	3	0	0	0	0.23535	1	26235	26235		29.082	8.667	1	2630700			30073	2962	14927	14986	34496	34496					0.015546198570064007
RVFSDIIYTV	10	Unmodified	_RVFSDIIYTV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8334838747978	2	606.834788	1211.65502	0.70293	0.00042656	-0.95136	-0.00057732	-0.24843	-0.00015076	606.8335854505827	58.339	0.30004	59.757	59.609	59.909	1.4181					13	9	2	0	0	0	0.10014	1	24458	24458		63.961	24.011	1	3651100			30074	2270	14928	14987	34497	34497					0.05766256711626738
RVFSDIIYTV	10	Unmodified	_RVFSDIIYTV_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.8342162966728	2	606.834788	1211.65502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.741	1	59.71	59.21	60.21	1.969								0	0	0	0.033394	1	24220	24220		47.594	7.6447	1				30075	2270	14928	14987	34498	34498					0.05766256711626738
RVGAALPA	8	Unmodified	_RVGAALPA_					0	0	0		ENST00000252134.11_1_22:18273500-18274125:-|nuORF	ENST00000252134.11_1_22:18273500-18274125:-|nuORF	ENST00000252134.11_1_22:18273500-18274125:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4589111208916	1	754.456999	753.449723	2.7285	0.0020586	0.67273	0.00050754	3.4013	0.0025661	754.4567151253708	104.48	0.14713	104.54	104.46	104.6	0.056801					21	7	5	0	0	0	0.89008	1	44051	44051		2.5775	0	1	118150000			30076	5584	14929	14988	34499	34499					0.06313567762708772
RVGQVEWTL	9	Unmodified	_RVGQVEWTL_					0	0	0			REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2991821169853	2	544.298373	1086.58219	3.899	0.0021222	0.16025	8.7224E-05	4.0593	0.0022095	544.2982966353535	95.702	0.42499	96.123	95.856	96.281	0.42119					23	13	2	0	0	0	0.44512	1	40241	40241		18.146	1.2041	1	745960	+		30077	14309	14930	14989	34500	34500					0.04236547708865146
RVGQVEWTL	9	Unmodified	_RVGQVEWTL_					0	0	0			REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.298373	1086.58219	3.899	0.0021222	0.16025	8.7224E-05	4.0593	0.0022095	544.2982966353535	95.702	0.42499	96.123	95.856	96.281	0.42119	0.15361	0.0012455	NaN	18.146	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745960	+		30078	14309	14930	14989							0.04236547708865146
RVGQVEWTL	9	Unmodified	_RVGQVEWTL_					0	0	0			REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	REV__L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|72|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	544.298373	1086.58219	3.2682	0.0017789	-1.7808	-0.00096929	1.4874	0.00080956	544.2965569655416	95.414	0.36574	95.816	95.641	96.007	0.40208	-0.15361	-0.00086748	NaN	18.146	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	754490	+		30079	14309	14930	14989							0.04236547708865146
RVHDNFTL	8	Unmodified	_RVHDNFTL_					0	0	0		tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2603942751884	2	501.261791	1000.50903	1.5844	0.00079421	-0.83726	-0.00041969	0.74715	0.00037452	501.261594232825	68.028	0.4444	68.028	67.789	68.233	0					27	13	3	0	0	0	0.66196	2	28313	28313;28363		34.102	1.9855	1	2027300			30080	17073	14931	14990	34501;34502	34501					0.008794189862442181
RVHDNFTL	8	Unmodified	_RVHDNFTL_					0	0	0		tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	tr|A0A7D6ZGG5|A0A7D6ZGG5_9CLOTDUF1292domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18525PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2613403201103	2	501.261791	1000.50903	2.2984	0.0011521	-1.537	-0.00077044	0.76138	0.00038165	501.26000472507644	67.44	0.51869	67.763	67.412	67.931	0.32269					34	16	3	0	0	0	0.66196	2	28214	28214;28266		34.102	1.9855	1	1808700			30081	17073	14931	14990	34503;34504	34503					0.008794189862442181
RVIWELFI	8	Unmodified	_RVIWELFI_					0	0	0		ENST00000394071.6_2_14:74184432-74184528:-|nuORF	ENST00000394071.6_2_14:74184432-74184528:-|nuORF	ENST00000394071.6_2_14:74184432-74184528:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3223754763603	2	538.318577	1074.6226	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.57	1	103.75	103.25	104.25	0.1731								0	0	0	1.0178	1	43646	43646		2.5775	0	1				30082	6277	14932	14991	34505	34505					0.08827514099266409
RVKCEDHSCAG	11	Unmodified	_RVKCEDHSCAG_					0	0	0		ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1798583865166	3	402.178102	1203.51248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3987	1	9.1332	8.6332	9.6332	0.73452								0	0	0	0.63775	1	3491	3491		0.094841	0	1				30083	6645	14933	14992	34506	34506					-0.08114022293716516
RVKCEDHSCAG	11	Unmodified	_RVKCEDHSCAG_					0	0	0		ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1797973513603	3	402.178102	1203.51248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5903	1	9.3249	8.8249	9.8249	0.73452								0	0	0	0.63775	1	3572	3572		0.094841	0	1				30084	6645	14933	14992	34507	34507					-0.08114022293716516
RVKCEDHSCAG	11	Unmodified	_RVKCEDHSCAG_					0	0	0		ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	ENST00000456943.6_1_6:2272473-2272845:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1798583865166	3	402.178102	1203.51248	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8737	1	9.6082	9.1082	10.108	0.73452								0	0	0	0.63775	1	3691	3691		0.094841	0	1				30085	6645	14933	14992	34508	34508					-0.08114022293716516
RVKKARQA	8	Unmodified	_RVKKARQA_					0	0	0			REV__nc|ENSG00000198648|Q9UEW8-2|STK39	REV__nc|ENSG00000198648|Q9UEW8-2|STK39	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.8116943240166	2	478.809242	955.603932	3.2638	0.0015627	1.7164	0.00082182	4.9802	0.0023845	478.81077561671526	109.11	0.26281	109.27	109.11	109.37	0.15898					29	12	3	0	0	0	0.89178	1	47309	47309		0.69038	0	1	55814000	+		30086	11720	14934	14993	34509	34509					0.12435397248077606
RVKKARQA	8	Unmodified	_RVKKARQA_					0	0	0			REV__nc|ENSG00000198648|Q9UEW8-2|STK39	REV__nc|ENSG00000198648|Q9UEW8-2|STK39	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	478.809242	955.603932	1.5353	0.0007351	4.4857	0.0021478	6.021	0.0028829	478.81247987720457	109.14	0.12915	109.14	109.06	109.19	0	-0.061356	0.0022441	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4140000	+		30087	11720	14934	14993							0.12435397248077606
RVKKARQA	8	Unmodified	_RVKKARQA_					0	0	0			REV__nc|ENSG00000198648|Q9UEW8-2|STK39	REV__nc|ENSG00000198648|Q9UEW8-2|STK39	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	478.809242	955.603932	3.5517	0.0017006	2.9148	0.0013956	6.4665	0.0030962	478.81108929021997	109.1	0.13943	109.15	109.09	109.22	0.050644	-0.050359	0.00073976	NaN	0.69038	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4417000	+		30088	11720	14934	14993							0.12435397248077606
RVKKARQA	8	Unmodified	_RVKKARQA_					0	0	0			REV__nc|ENSG00000198648|Q9UEW8-2|STK39	REV__nc|ENSG00000198648|Q9UEW8-2|STK39	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	478.809242	955.603932	3.2638	0.0015627	1.7164	0.00082182	4.9802	0.0023845	478.81077561671526	109.11	0.26281	109.27	109.11	109.37	0.15898	0.069153	-0.00040786	NaN	0.69038	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	55814000	+		30089	11720	14934	14993							0.12435397248077606
RVKLDKANQKL	11	Unmodified	_RVKLDKANQKL_					0	0	0		tr|A0A7D6ZGH3|A0A7D6ZGH3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18625PE=4SV=1	tr|A0A7D6ZGH3|A0A7D6ZGH3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18625PE=4SV=1	tr|A0A7D6ZGH3|A0A7D6ZGH3_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_18625PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2733032107353	3	438.273499	1311.79867	3.1458	0.0013787	-3.2831	-0.0014389	-0.13728	-6.0167E-05	438.27197011862785	95.835	0.34222	95.958	95.801	96.144	0.12331					35	11	4	0	0	0	1.0357	1	40170	40170		1.4551	0	1	54323000			30090	17074	14935	14994	34510	34510					0.15524103542543344
RVKQLRKA	8	Unmodified	_RVKQLRKA_					0	0	0			REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	REV__tr|A0A7D6ZZS8|A0A7D6ZZS8_9CLOTAminopeptidaseOS=ClostridiumintestinaleOX=36845GN=ypdEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	998.6622192263603	1	998.658158	997.650882	4.0083	0.0040029	0.083608	8.3496E-05	4.0919	0.0040864	998.6576235668533	106.95	0.17797	107.11	106.99	107.17	0.15781					26	7	5	0	0	0	0.89178	1	45919	45919		0.69038	0	1	647310000	+		30091	15801	14936	14995	34511	34511					0.15196256799231378
RVKRAAAG	8	Unmodified	_RVKRAAAG_					0	0	0			REV__ENSG00000166813|ENST00000394412|KIF7	REV__ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.7622558474541	2	414.761761	827.508969	0.47989	0.00019904	-1.2077	-0.0005009	-0.7278	-0.00030186	414.76137118485224	70.492	1.2973	70.492	70.149	71.446	0					117	41	5	0	0	0	0.89178	1	29258	29258		0.69038	0	1	444140000	+		30092	10838	14937	14996	34512	34512					0.08831463776891724
RVKRAAAG	8	Unmodified	_RVKRAAAG_					0	0	0			REV__ENSG00000166813|ENST00000394412|KIF7	REV__ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.7620117068291	2	414.761761	827.508969	1.4773	0.00061275	-1.5462	-0.00064132	-0.068895	-2.8575E-05	414.76118648371573	70.254	1.8125	70.576	70.192	72.005	0.32224					142	57	5	0	0	0	0.89178	2	29552	29552;29597		0.69038	0	1	366180000	+		30093	10838	14937	14996	34513;34514	34513					0.08831463776891724
RVKRAAAG	8	Unmodified	_RVKRAAAG_					0	0	0			REV__ENSG00000166813|ENST00000394412|KIF7	REV__ENSG00000166813|ENST00000394412|KIF7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	415.2413818240166	2	414.761761	827.508969	1.8816	0.0007804	-1.2382	-0.00051354	0.64339	0.00026686	414.761188237141	69.322	1.2469	70.688	70.381	71.628	1.3657					118	40	4	0	0	0	2.3239	1	28996	28996		0.69038	0	1	215750000	+		30094	10838	14937	14996	34515	34515					0.08831463776891724
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9124023318291	2	685.910019	1369.80549	2.5766	0.0017673	-2.1332	-0.0014632	0.44336	0.0003041	685.9087114836426	84.011	0.77367	84.011	83.752	84.526	0					41	24	2	0	0	0	0.89803	1	35016	35016		0.40072	0	1	1045300	+		30095	13259	14938	14997	34516	34516					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9103881716728	2	685.910019	1369.80549	2.7523	0.0018878	-2.1773	-0.0014934	0.57504	0.00039442	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	0.89803	1	35340	35340		0.40072	0.050084	1	4137900	+		30096	13259	14938	14997	34517	34517					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9107543826103	2	685.910019	1369.80549	2.2313	0.0015305	-1.8202	-0.0012485	0.41105	0.00028194	685.9088979398654	82.982	1.3835	83.252	82.573	83.956	0.27029					122	44	3	0	0	0	0.89803	3	34624	34624;34674;34964		0.40072	0.050084	1	1896900	+		30097	13259	14938	14997	34518;34519;34520	34518					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9109374880791	2	685.910019	1369.80549	2.4966	0.0017124	-1.6735	-0.0011479	0.82306	0.00056454	685.9085365072254	85.221	1.8065	85.473	84.685	86.491	0.25227					134	57	3	0	0	0	0.89803	3	35391	35391;35443;35494		0.40072	0.050084	1	4704100	+		30098	13259	14938	14997	34521;34522;34523	34521					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.9075805544853	2	685.910019	1369.80549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.022	1	85.21	84.71	85.71	1.1879								0	0	0	0.66166	1	35259	35259		1.6526	0.32309	1		+		30099	13259	14938	14997	34524	34524					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.9089843630791	2	685.910019	1369.80549	2.9336	0.0020122	0.21885	0.00015011	3.1524	0.0021623	685.9100878810526	82.069	0.56889	83.739	83.575	84.144	1.67					29	17	2	0	0	0	0.89803	1	34419	34419		1.6526	0.32309	1	1282700	+		30100	13259	14938	14997	34525	34525					0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	685.910019	1369.80549	2.5766	0.0017673	-2.1332	-0.0014632	0.44336	0.0003041	685.9087114836426	84.011	0.77367	84.011	83.752	84.526	0	-0.128	-0.0016363	NaN	0.40072	41	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1045300	+		30101	13259	14938	14997							0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	685.910019	1369.80549	2.3623	0.0016203	-0.084374	-5.7873E-05	2.2779	0.0015625	685.90973071854	83.881	0.61884	84.141	83.947	84.565	0.26083	0.0025307	0.0011744	NaN	0.40072	36	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	994360	+		30102	13259	14938	14997							0.13537461213786628
RVKRQRQWTI	10	Unmodified	_RVKRQRQWTI_					0	0	0			REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	REV__ENST00000492556.5_1_22:51018168-51020414:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	685.910019	1369.80549	2.196	0.0015063	0.1826	0.00012525	2.3786	0.0016315	685.9109249045998	83.077	0.46185	84.264	84.054	84.516	1.1879	0.12547	0.0015406	NaN	0.40072	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	541810	+		30103	13259	14938	14997							0.13537461213786628
RVKRVLMG	8	Unmodified	_RVKRVLMG_					0	0	0		ENST00000572638.1_1_17:44625595-44632942:+|nuORF;ENSG00000238083|ENST00000576629|LRRC37A2;ENSG00000176681|ENST00000320254|LRRC37A	ENST00000572638.1_1_17:44625595-44632942:+|nuORF	ENST00000572638.1_1_17:44625595-44632942:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2037841677666	3	320.20414	957.59059	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.544	1	38.853	38.353	39.353	0.30857								0	0	0	1.0178	1	16216	16216		0.45834	0	1				30104	4415	14939	14998	34526	34526					0.11009823144502207
RVKVVIPVR	9	Unmodified	_RVKVVIPVR_					0	0	0			REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0697509646416	3	355.913354	1064.71823	0.41243	0.00014679	2.8098	0.0010001	3.2223	0.0011469	355.9141994505128	22.435	0.32889	22.658	22.465	22.794	0.22342					16	10	2	0	0	0	0.11954	1	9372	9372		0.26902	0	1	957290	+		30105	12959	14940	14999	34527	34527					0.18846287010183005
RVKVVIPVR	9	Unmodified	_RVKVVIPVR_					0	0	0			REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0692321658134	3	355.913354	1064.71823	-0.2914	-0.00010371	3.8167	0.0013584	3.5253	0.0012547	355.91435866659884	21.042	0.14642	22.168	22.072	22.219	1.1254					8	4	2	0	0	0	0.11954	1	8778	8778		0.26902	0	1	465660	+		30106	12959	14940	14999	34528	34528					0.18846287010183005
RVKVVIPVR	9	Unmodified	_RVKVVIPVR_					0	0	0			REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	355.913354	1064.71823	0.36532	0.00013002	4.427	0.0015756	4.7924	0.0017057	355.91498432041783	21.676	0.69231	21.899	21.421	22.114	0.223	-0.14791	0.0002225	NaN	0.26902	41	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	455910	+		30107	12959	14940	14999							0.18846287010183005
RVKVVIPVR	9	Unmodified	_RVKVVIPVR_					0	0	0			REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	REV__ENST00000418618.1_1:31971908-31973444:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	355.913354	1064.71823	-0.24405	-8.6862E-05	4.1594	0.0014804	3.9154	0.0013935	355.9147212544705	21.398	0.30478	22.575	22.415	22.719	1.177	-0.013591	0.00036309	NaN	0.26902	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751270	+		30108	12959	14940	14999							0.18846287010183005
RVLDELTLA	9	Unmodified	_RVLDELTLA_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;CON__A2A4G1;CON__Q6IFX2;ENSG00000186832|ENST00000301653|KRT16;CON__P08779;ENSG00000186847|ENST00000167586|KRT14;CON__P02533;CON__P19012;ENSG00000171346|ENST00000254043|KRT15;CON__Q04695;CON__Q9QWL7;ENSG00000128422|ENST00000311208|KRT17;ENST00000399211.7_1_17:16744211-16749072:-|nuORF;KRT16|p.M259Sfs*9|1|0.05|ENSG00000186832|chr17:41611226-41611227|-/ACACGTGTGGACAC|frameshift_variant;ENST00000474031.5_1_17:39671722-39674667:-|nuORF;nc|ENSG00000171346|P19012-2|KRT15;ENST00000493253.5_1_17:39778327-39780527:-|nuORF;CON__P08730-1;ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1;ENST00000414673.5_1_17:16734454-16736059:-|nuORF	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3023559451103	2	515.300581	1028.58661	2.1741	0.0011203	0.51851	0.00026719	2.6926	0.0013875	515.3008952978672	44.826	0.38382	46.786	46.576	46.96	1.9596					24	11	3	0	0	0	0.40005	1	18814	18814		20.415	2.2682	1	3261700		+	30109	344;346;6398	14941	15000	34529	34529					0.07346012131779389
RVLENTKRSRR	11	Unmodified	_RVLENTKRSRR_					0	0	0		ENSG00000135414|ENST00000257868|GDF11	ENSG00000135414|ENST00000257868|GDF11	ENSG00000135414|ENST00000257868|GDF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9250976443291	2	707.921115	1413.82768	2.5402	0.0017982	0.16401	0.00011611	2.7042	0.0019143	707.9210324951113	87.079	1.3768	87.322	87.17	88.547	0.24387					87	46	3	0	0	0	1.0388	1	36598	36598		0	0	1	5000800			30110	2662	14942	15001	34530	34530					0.13731640891546704
RVLGKRLGRQL	11	Unmodified	_RVLGKRLGRQL_					0	0	0			REV__nc|ENSG00000154358|Q5VST9|OBSCN	REV__nc|ENSG00000154358|Q5VST9|OBSCN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	433.2671996951103	3	432.6176	1294.83097	2.0925	0.00090527	1.2073	0.00052229	3.2998	0.0014276	432.6182853087481	44.659	1.9921	46.618	45.5	47.493	1.9596					69	38	2	0	0	0	0.14606	1	18466	18466		1.2148	0	1	3519900	+		30111	10474	14943	15002	34531	34531					0.1953493573621472
RVLKRKTRPSG	11	Unmodified	_RVLKRKTRPSG_					0	0	0			REV__ENSG00000272031|ENST00000606888|ANKRD34A	REV__ENSG00000272031|ENST00000606888|ANKRD34A	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2774841189384	3	433.277355	1296.81024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.666	1	86.666	86.166	87.166	0								0	0	0	0.63775	1	36120	36120		0.40827	0.17242	1		+		30112	12005	14944	15003	34532	34532					0.17370345356539474
RVLKRKTRPSG	11	Unmodified	_RVLKRKTRPSG_					0	0	0			REV__ENSG00000272031|ENST00000606888|ANKRD34A	REV__ENSG00000272031|ENST00000606888|ANKRD34A	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2779113650322	3	433.277355	1296.81024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.503	1	86.746	86.246	87.246	0.24387								0	0	0	0.63775	1	36182	36182		0.40827	0.26837	1		+		30113	12005	14944	15003	34533	34533					0.17370345356539474
RVLRATSP	8	Unmodified	_RVLRATSP_					0	0	0			REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2744323611259	2	450.274701	898.534849	2.8077	0.0012642	-3.5602	-0.0016031	-0.75253	-0.00033885	450.2731585070389	85.4	0.63994	86.559	86.303	86.943	1.159					41	25	3	0	0	0	0.89051	1	35824	35824		2.3027	2.3027	1	5010500	+		30114	12390	14945	15004	34534	34534					0.08152313228504227
RVLRATSP	8	Unmodified	_RVLRATSP_					0	0	0			REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2760192751884	2	450.274701	898.534849	3.8579	0.0017371	-2.3672	-0.0010659	1.4906	0.00067119	450.2733523849093	86.504	1.2619	87.631	87.416	88.678	1.1265					65	44	2	0	0	0	0.89051	3	36499	36499;36564;36631		2.3027	1.6124	1	2947000	+		30115	12390	14945	15004	34535;34536;34537	34535					0.08152313228504227
RVLRATSP	8	Unmodified	_RVLRATSP_					0	0	0			REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2754699587822	2	450.274701	898.534849	4.3631	0.0019646	-3.0395	-0.0013686	1.3235	0.00059594	450.27326644581154	86.369	0.54232	87.916	87.69	88.232	1.547					33	19	2	0	0	0	0.89051	3	36304	36304;36405;36468		2.3027	0.24298	1	3601000	+		30116	12390	14945	15004	34538;34539;34540	34538					0.08152313228504227
RVLRATSP	8	Unmodified	_RVLRATSP_					0	0	0			REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	450.274701	898.534849	3.1351	0.0014117	-4.1838	-0.0018839	-1.0487	-0.0004722	450.2731883205073	87.091	0.6082	87.335	87.102	87.71	0.24387	-0.14804	-0.00087666	NaN	2.3027	45	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6894900	+		30117	12390	14945	15004							0.08152313228504227
RVLRATSP	8	Unmodified	_RVLRATSP_					0	0	0			REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	REV__ENST00000316097.12_1_19:1924290-1924809:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	450.274701	898.534849	3.8579	0.0017371	-2.3672	-0.0010659	1.4906	0.00067119	450.2733523849093	86.504	1.2619	87.631	87.416	88.678	1.1265	0.14804	0.00075927	NaN	2.3027	65	44	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2947000	+		30118	12390	14945	15004							0.08152313228504227
RVLRITKI	8	Unmodified	_RVLRITKI_					0	0	0			REV__ENSG00000165650|ENST00000334464|PDZD8	REV__ENSG00000165650|ENST00000334464|PDZD8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	500.3796264529228	2	499.845294	997.676034	3.3444	0.0016717	-0.86878	-0.00043426	2.4756	0.0012374	499.8448728381533	104	0.11372	104.06	103.97	104.09	0.059502					8	5	2	0	0	0	2.3239	1	43717	43717		0	0	1	2294100	+		30119	10789	14946	15005	34541	34541					0.1771031160177472
RVLVRRPRRA	10	Unmodified	_RVLVRRPRRA_					0	0	0		chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.4628784060478	4	320.463999	1277.82689	-0.27513	-8.8169E-05	-2.7664	-0.00088652	-3.0415	-0.00097469	320.46313087040926	21.178	0.53483	22.303	22.102	22.637	1.1254					40	17	3	0	0	0	0.89803	1	8881	8881		1.5923	0.89462	1	1620600			30120	304	14947	15006	34542	34542					0.19908891033151122
RVLVRRPRRA	10	Unmodified	_RVLVRRPRRA_					0	0	0		chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	chrX:153702990-153703990|160|11.16|0.0|20.09|-|2|BCAP31,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.4631225466728	4	320.463999	1277.82689	-0.20169	-6.4635E-05	-3.9829	-0.0012764	-4.1846	-0.001341	320.4629887096558	20.798	0.56293	22.373	22.059	22.622	1.5748					40	18	3	0	0	0	0.89803	1	8662	8662		0.69767	0.07084	1	1382900			30121	304	14947	15006	34543	34543					0.19908891033151122
RVMELFFTV	9	Unmodified	_RVMELFFTV_					0	0	0		ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	ENSG00000132953|ENST00000255305|XPO4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.3101684451103	2	571.307352	1140.60015	2.7094	0.0015479	1.2101	0.00069136	3.9196	0.0022393	571.3078484519184	72.547	0.3775	74.357	74.261	74.639	1.8101					27	11	3	0	0	0	0.12216	1	30440	30440		41.956	3.8044	1	2141400			30122	2551	14948	15007	34544	34544					0.03547546639333632
RVNKKVNND	9	Unmodified	_RVNKKVNND_					0	0	0		nc|ENSG00000115355|Q3V6T2-5|CCDC88A;nc|ENSG00000115355|Q3V6T2-4|CCDC88A;nc|ENSG00000115355|Q3V6T2-2|CCDC88A;nc|ENSG00000115355|Q3V6T2-3|CCDC88A;ENSG00000115355|ENST00000436346|CCDC88A	nc|ENSG00000115355|Q3V6T2-5|CCDC88A	nc|ENSG00000115355|Q3V6T2-5|CCDC88A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2533752322197	3	362.871995	1085.59415	-1.2873	-0.00046712	-2.998	-0.0010879	-4.2853	-0.001555	362.8706892117888	30.768	0.45943	30.768	30.651	31.11	0					18	14	2	0	0	0	0.11941	1	13016	13016		1.0715	0.93157	1	563060			30123	1914	14949	15008	34545	34545					0.05478164452051715
RVNNFQNYFRR	11	Unmodified	_RVNNFQNYFRR_					0	0	0			REV__ENST00000262053.7_1_12:51214365-51214533:+|nuORF	REV__ENST00000262053.7_1_12:51214365-51214533:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.8974487185478	2	757.39219	1512.76983	0.69591	0.00052708	4.1929	0.0031757	4.8888	0.0037028	757.395725128458	50.794	0.17799	52.188	52.109	52.287	1.3938					12	5	3	0	0	0	1.0174	1	21266	21266		2.7352	0.45242	1	911870	+		30124	12191	14950	15009	34546	34546					0.033953789660927214
RVNSRRPRP	9	Unmodified	_RVNSRRPRP_					0	0	0		ENST00000382349.4_1_19:1776116-1776464:+|nuORF	ENST00000382349.4_1_19:1776116-1776464:+|nuORF	ENST00000382349.4_1_19:1776116-1776464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2286559939384	3	379.895245	1136.66391	1.4945	0.00056774	2.2325	0.00084812	3.727	0.0014159	379.8976826829215	71.299	1.4837	71.622	70.679	72.163	0.32359					67	46	2	0	0	0	0.84531	1	29635	29635		1.1933	0.12188	1	2100000			30125	6237	14951	15010	34547	34547					0.10104087911304305
RVPCLIPP	8	Unmodified	_RVPCLIPP_					0	0	0		ENST00000583167.5_1_17:45892556-45892844:-|nuORF	ENST00000583167.5_1_17:45892556-45892844:-|nuORF	ENST00000583167.5_1_17:45892556-45892844:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	447.7651855349541	2	447.765123	893.515694	2.7349	0.0012246	-1.9835	-0.00088814	0.75144	0.00033647	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89008	1	30682	30682		2.5775	1.7838	1	26597000			30126	7441	14952	15011	34548	34548					0.06467640613254844
RVPRITKGK	9	Unmodified	_RVPRITKGK_					0	0	0			REV__ENST00000556618.1_3_15:91500516-91500609:+|nuORF	REV__ENST00000556618.1_3_15:91500516-91500609:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	352.2332641482353	3	352.232975	1053.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.27	1	102.27	101.77	102.77	0								0	0	0	0.42693	1	42845	42845		0.23584	0	1		+		30127	13871	14953	15012	34549	34549					0.15240525970693852
RVPRRPRVL	9	Unmodified	_RVPRRPRVL_					0	0	0		ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1148.751513659954	1	1148.7487	1147.74143	2.7725	0.0031849	0.24026	0.000276	3.0128	0.0034609	1148.7488426054367	107.48	0.21008	107.64	107.51	107.72	0.15781					30	10	4	0	0	0	0.84963	1	46208	46208		0.6015	0	1	147990000			30128	6084	14954	15013	34550	34550					0.17346725847505695
RVPRRPRVL	9	Unmodified	_RVPRRPRVL_					0	0	0		ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1148.7487	1147.74143	3.9278	0.0045121	-0.21735	-0.00024968	3.7105	0.0042624	1148.7481966922262	107.49	0.18159	107.54	107.44	107.62	0.052452	-0.049476	-0.00032733	NaN	0.6015	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16661000			30129	6084	14954	15013							0.17346725847505695
RVPRRPRVL	9	Unmodified	_RVPRRPRVL_					0	0	0		ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1148.7487	1147.74143	2.9633	0.0034041	-0.0020393	-2.3427E-06	2.9613	0.0034018	1148.7486224038594	107.43	0.19449	107.59	107.5	107.7	0.15795	0.0033685	-7.9987E-05	NaN	0.6015	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	77055000			30130	6084	14954	15013							0.17346725847505695
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7970153689384	2	491.795269	981.575986	1.1763	0.00057851	2.0357	0.0010012	3.2121	0.0015797	491.7959331921709	33.039	0.45241	33.039	32.844	33.296	0					36	15	3	0	0	0	0.89008	2	13801	13801;13848		2.5775	0	1	3732700	+		30131	12741	14955	15014	34551;34552	34551					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7967101931572	2	491.795269	981.575986	1.1906	0.00058554	2.4774	0.0012184	3.668	0.0018039	491.79616695175866	33.464	0.37298	33.464	33.265	33.638	0					25	11	3	0	0	0	0.89008	1	14073	14073		2.5775	0	1	3066900	+		30132	12741	14955	15014	34553	34553					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.3007385134697	2	491.795269	981.575986	1.9414	0.00095477	1.2519	0.00061569	3.1933	0.0015705	491.79544183725363	32.434	0.49192	32.729	32.497	32.989	0.29431					28	15	2	0	0	0	0.89008	2	13573	13573;13615		2.5775	0	1	5856400	+		30133	12741	14955	15014	34554;34555	34554					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7972595095634	2	491.795269	981.575986	0.73599	0.00036196	2.1344	0.0010497	2.8704	0.0014117	491.79571632536596	31.233	0.52199	32.514	32.343	32.865	1.2813					33	16	3	0	0	0	0.89008	3	13077	13077;13127;13177		2.5775	0	1	2826600	+		30134	12741	14955	15014	34556;34557;34558	34556					0.08446074267999393
RVQALPLW	8	Unmodified	_RVQALPLW_					0	0	0			REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	REV__ENST00000378536.4_1_1:2240511-2240694:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3002197146416	2	491.795269	981.575986	0.97628	0.00048013	1.699	0.00083554	2.6752	0.0013157	491.7956435095711	30.755	0.47204	32.57	32.262	32.734	1.8151					34	15	3	0	0	0	0.89008	2	12808	12808;12857		2.5775	0	1	1962500	+		30135	12741	14955	15014	34559;34560	34559					0.08446074267999393
RVQEKFSFMM	10	Unmodified	_RVQEKFSFMM_					0	0	0		ENST00000535264.5_1_5:64865821-64867835:+|nuORF	ENST00000535264.5_1_5:64865821-64867835:+|nuORF	ENST00000535264.5_1_5:64865821-64867835:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8821594119072	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.252	1	4.8756	4.3756	5.3756	0.62362								0	0	0	0.66254	1	1755	1755		0.15932	0.064481	1				30136	7195	14956	15015	34561	34561					-0.012699271806923207
RVQKVPRLGL	10	Unmodified	_RVQKVPRLGL_					0	0	0			REV__ENSG00000204822|ENST00000258105|MRPL53	REV__ENSG00000204822|ENST00000258105|MRPL53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2550536990166	3	389.25578	1164.74551	-0.58871	-0.00022916	-2.9093	-0.0011324	-3.498	-0.0013616	389.2553132111387	29.438	0.46121	29.438	29.178	29.64	0					65	14	6	0	0	0	0.89588	1	12364	12364		1.9064	0	1	196810000	+		30137	11803	14957	15016	34562	34562					0.16972770550569294
RVQKVPRLGL	10	Unmodified	_RVQKVPRLGL_					0	0	0			REV__ENSG00000204822|ENST00000258105|MRPL53	REV__ENSG00000204822|ENST00000258105|MRPL53	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2547180056572	3	389.25578	1164.74551	-0.57311	-0.00022308	-3.3039	-0.0012861	-3.877	-0.0015092	389.2547763831149	29.807	0.58382	29.807	29.608	30.192	0					82	18	6	0	0	0	0.88031	1	12520	12520		3.5871	1.6807	1	134340000	+		30138	11803	14957	15016	34563	34563					0.16972770550569294
RVQLASIPILW	11	Unmodified	_RVQLASIPILW_					0	0	0			REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2	REV__nc|ENSG00000146426|Q8IVF5-3|TIAM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	432.5994750857353	3	432.599324	1294.77614	4.147	0.001794	-0.79349	-0.00034326	3.3535	0.0014507	432.59896265354115	95.422	0.42627	95.843	95.58	96.006	0.4212					42	17	4	0	0	0	1.0369	1	40112	40112		1.1098	0.038292	1	12807000	+		30139	10303	14958	15017	34564	34564					0.14054504144928615
RVQLHIVSSR	10	Unmodified	_RVQLHIVSSR_					0	0	0			REV__ENSG00000197410|ENST00000357232|DCHS2	REV__ENSG00000197410|ENST00000357232|DCHS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8575317263603	2	597.856921	1193.69929	2.1578	0.00129	-0.9659	-0.00057747	1.1919	0.00071257	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.85604	1	32495	32495		6.2058	2.2614	1	9732000	+		30140	11673	14959	15018	34565	34565					0.11018705648439209
RVQRQHKK	8	Unmodified	_RVQRQHKK_					0	0	0		ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3312255740166	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89178	1	28959	28959		0.69038	0	1	3238400			30141	6317	14960	15019	34566	34566					0.1110158702535955
RVQRQHKK	8	Unmodified	_RVQRQHKK_					0	0	0		ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	ENST00000397885.2_1_9:2837287-2844066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3320190310478	2	540.330873	1078.64719	2.5161	0.0013595	0.36437	0.00019688	2.8805	0.0015564	540.331120381793	84.366	0.6058	84.627	84.248	84.854	0.26083					32	18	3	0	0	0	0.89178	1	35339	35339		0.69038	0.088878	1	1298700			30142	6317	14960	15019	34567	34567					0.1110158702535955
RVRIGSRLLP	10	Unmodified	_RVRIGSRLLP_					0	0	0		ENST00000244061.5_1_20:48568897-48568966:+|nuORF	ENST00000244061.5_1_20:48568897-48568966:+|nuORF	ENST00000244061.5_1_20:48568897-48568966:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	583.3782836794853	2	583.877656	1165.74076	0.73257	0.00042773	3.0198	0.0017632	3.7524	0.0021909	583.8792540664143	29.539	0.30229	31.338	31.204	31.506	1.7987					10	9	2	0	0	0	0.12549	1	12452	12452		2.9952	1.151	1	2330100			30143	5573	14961	15020	34568	34568					0.16451886407821803
RVRIYLSMI	9	Unmodified	_RVRIYLSMI_					0	0	0			REV__tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	REV__tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8440429568291	2	575.841894	1149.66923	1.8957	0.0010916	3.0925	0.0017808	4.9882	0.0028724	575.8434594961253	71.537	1.542	72.879	71.924	73.467	1.3415					91	49	3	0	0	0	0.76456	1	29997	29997		4.756	0.81161	1	2591100	+		30144	15302	14962	15021	34569	34569					0.10038630658914371
RVRKKHRKMHR	11	Unmodified	_RVRKKHRKMHR_					0	0	0		ENST00000471418.5_1_3:114477768-114477897:-|nuORF	ENST00000471418.5_1_3:114477768-114477897:-|nuORF	ENST00000471418.5_1_3:114477768-114477897:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	307.3937560915947	5	307.1926	1530.92662	1.74	0.0005345	0.32852	0.00010092	2.0685	0.00063542	307.3932065312781	58.031	0.79938	58.354	58.173	58.972	0.32298					39	25	2	0	0	0	1.0405	1	24463	24463		0	0	1	2006100			30145	6741	14963	15022	34570	34570					0.1823938537545473
RVRPFKSNFR	10	Unmodified	_RVRPFKSNFR_					0	0	0		nc|ENSG00000173681|A2AJT9-2|BCLAF3;ENSG00000173681|ENST00000379682|BCLAF3	nc|ENSG00000173681|A2AJT9-2|BCLAF3	nc|ENSG00000173681|A2AJT9-2|BCLAF3	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.2547485232353	3	436.254551	1305.74182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.11	1	103.27	102.77	103.77	0.16445								0	0	0	0.66222	1	43438	43438		0.69767	0.19171	1				30146	4296	14964	15023	34571	34571					0.10118100776685424
RVRPRRPRRR	10	Unmodified	_RVRPRRPRRR_					0	0	0		ENST00000371873.9_1_1:47799697-47834181:+|nuORF	ENST00000371873.9_1_1:47799697-47834181:+|nuORF	ENST00000371873.9_1_1:47799697-47834181:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.9798461794853	4	351.980347	1403.89228	-1.3556	-0.00047714	-0.032283	-1.1363E-05	-1.3879	-0.0004885	351.9802264837377	36.565	0.81154	36.565	36.27	37.081	0					133	55	3	0	0	0	0.89803	1	15515	15515		0.13989	0	1	35389000			30147	6131	14965	15024	34572	34572					0.20649305278834618
RVRRLARL	8	Unmodified	_RVRRLARL_					0	0	0			REV__ENSG00000132004|ENST00000393261|FBXW9	REV__ENSG00000132004|ENST00000393261|FBXW9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3525878787041	2	520.351609	1038.68866	1.7578	0.00091465	-3.4128	-0.0017759	-1.655	-0.0008612	520.3506654025833	65.967	0.33849	67.875	67.706	68.045	1.9085					23	10	3	0	0	0	0.82039	1	27659	27659		19.439	2.4967	1	2702200	+		30148	9836	14966	15025	34573	34573					0.17086767784689982
RVRSRKFP	8	Unmodified	_RVRSRKFP_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;DNAH9|p.H4399Qfs*22|1|0.04|ENSG00000007174|chr17:11962220-11962220|T/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3233520388603	2	523.322517	1044.63048	2.0591	0.0010776	0.68453	0.00035823	2.7436	0.0014358	523.322623421996	94.009	0.37801	94.009	93.741	94.119	0					21	11	2	0	0	0	0.89176	1	39255	39255		0.79363	0	1	1773000			30149	417	14967	15026	34574	34574					0.10995086139428167
RVRSRKFP	8	Unmodified	_RVRSRKFP_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;DNAH9|p.H4399Qfs*22|1|0.04|ENSG00000007174|chr17:11962220-11962220|T/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3251220583916	2	523.322517	1044.63048	4.2704	0.0022348	-0.16135	-8.4438E-05	4.1091	0.0021504	523.3225138564849	93.102	0.32688	93.974	93.801	94.128	0.87176					16	9	2	0	0	0	0.88958	1	39217	39217		2.8892	0.58649	1	609070			30150	417	14967	15026	34575	34575					0.10995086139428167
RVRSRKFP	8	Unmodified	_RVRSRKFP_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;DNAH9|p.H4399Qfs*22|1|0.04|ENSG00000007174|chr17:11962220-11962220|T/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	523.322517	1044.63048	3.2351	0.001693	0.13202	6.9089E-05	3.3671	0.0017621	523.3228593871947	92.746	0.35372	94.023	93.812	94.165	1.277	0.03725	8.0899E-06	NaN	2.8892	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	974510			30151	417	14967	15026							0.10995086139428167
RVRVKRPPNRL	11	Unmodified	_RVRVKRPPNRL_					0	0	0		chr13:43059714-43068930|312|12.6|0.21|5.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	chr13:43059714-43068930|312|12.6|0.21|5.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	chr13:43059714-43068930|312|12.6|0.21|5.93|+|0|TE_info:LTR7B,LTR7B_dup599,ERV1,LTR,donor,-,43059672,43059714|None,DNAJC15|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.7243530154228	4	348.477106	1389.87932	-0.37743	-0.00013153	-2.0329	-0.00070842	-2.4103	-0.00083994	348.476420364946	29.682	1.2515	30.964	30.312	31.564	1.2825					101	40	4	0	0	0	1.0402	1	12229	12229		0.08335	0	1	5197400			30152	197	14968	15027	34576	34576					0.19997429376121545
RVSDINFTL	9	Unmodified	_RVSDINFTL_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	532.7911254763603	2	532.790381	1063.56621	1.9953	0.0010631	-0.5292	-0.00028195	1.4661	0.00078111	532.7901934708142	51.155	0.47238	51.155	50.913	51.385	0					34	14	3	0	0	0	0.12251	1	21324	21324		41.84	3.6884	1	4068400			30153	1694	14969	15028	34577	34577					0.036968414719467546
RVSDINFTL	9	Unmodified	_RVSDINFTL_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7902709841728	2	532.790381	1063.56621	1.9407	0.001034	-1.2501	-0.00066606	0.69057	0.00036793	532.789753889738	49.326	0.58906	50.717	50.391	50.98	1.3911					54	18	4	0	0	0	0.04812	2	20613	20613;20665		69.105	24.698	1	18492000			30154	1694	14969	15028	34578;34579	34578					0.036968414719467546
RVSDINFTL	9	Unmodified	_RVSDINFTL_					0	0	0		nc|ENSG00000110075|Q5H9R7-3|PPP6R3;nc|ENSG00000110075|Q5H9R7-4|PPP6R3;nc|ENSG00000110075|Q5H9R7-6|PPP6R3;nc|ENSG00000110075|Q5H9R7-2|PPP6R3;ENSG00000110075|ENST00000393800|PPP6R3;nc|ENSG00000110075|Q5H9R7-5|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	nc|ENSG00000110075|Q5H9R7-3|PPP6R3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7903320193291	2	532.790381	1063.56621	2.1587	0.0011501	-1.7621	-0.00093886	0.39655	0.00021128	532.7895162626795	48.767	0.5561	50.744	50.422	50.978	1.9772					57	17	5	0	0	0	0.12251	1	20405	20405		41.84	3.6884	1	20749000			30155	1694	14969	15028	34580	34580					0.036968414719467546
RVSKGLIHK	9	Unmodified	_RVSKGLIHK_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5593444705009	3	346.557459	1036.65055	2.5962	0.00089973	3.1838	0.0011034	5.78	0.0020031	346.55886142392546	62.323	1.3536	64.28	63.938	65.292	1.9571					61	32	3	0	0	0	0.82654	1	26189	26189		2.2828	0.80087	1	1890000	+		30156	8861	14970	15029	34581	34581					0.13368837079360674
RVSKIGEI	8	Unmodified	_RVSKIGEI_					0	0	0			REV__tr|A0A7D7AGL9|A0A7D7AGL9_9CLOTPhosphoribosylformylglycinamidinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09215PE=4SV=1	REV__tr|A0A7D7AGL9|A0A7D7AGL9_9CLOTPhosphoribosylformylglycinamidinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09215PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1883727908134	3	301.187032	900.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.714	1	14.542	14.042	15.042	0.82789								0	0	0	1.0178	1	5686	5686		1.6526	0	1		+		30157	15922	14971	15030	34582	34582					0.08501777651440534
RVSKPFGVLM	10	Unmodified	_RVSKPFGVLM_					0	0	0		FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3317138552666	2	567.328619	1132.64269	1.8389	0.0010433	2.9248	0.0016593	4.7637	0.0027026	567.330149483754	72.639	1.5212	72.964	71.85	73.371	0.32494					110	47	3	0	0	0	0.89803	1	30323	30323		1.4819	0	1	2390700			30158	7584	14972	15031	34583	34583					0.08166941767581193
RVSKPFGVLM	10	Unmodified	_RVSKPFGVLM_					0	0	0		FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	FMR1NB|p.M71V|1|0.04|ENSG00000176988|chrX:147981613-147981613|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3306152224541	2	567.328619	1132.64269	2.1376	0.0012127	1.6104	0.00091361	3.7479	0.0021263	567.3293379482881	76.171	1.2438	76.492	76.272	77.516	0.32163					84	39	3	0	0	0	0.89803	1	31892	31892		1.4819	0.15237	1	2653400			30159	7584	14972	15031	34584	34584					0.08166941767581193
RVSLLVPLRTY	11	Unmodified	_RVSLLVPLRTY_					0	0	0			REV__tr|A0A7D6ZWN7|A0A7D6ZWN7_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19725PE=4SV=1	REV__tr|A0A7D6ZWN7|A0A7D6ZWN7_9CLOTDUF3794domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19725PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	439.6088744997978	3	439.606478	1315.79761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.758	1	82.038	81.538	82.538	0.2802								0	0	0	0.63775	1	34185	34185		1.2148	0.70888	1		+		30160	15750	14973	15032	34585	34585					0.15233889173646276
RVSRKFFSKC	10	Unmodified	_RVSRKFFSKC_					0	0	0			REV__NR2F2|p.R109W|1|0.85|ENSG00000185551|chr15:96332430-96332430|A/T|missense_variant	REV__NR2F2|p.R109W|1|0.85|ENSG00000185551|chr15:96332430-96332430|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	629.3495361208916	2	629.347874	1256.6812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.228	1	86.825	86.325	87.325	1.5962								0	0	0	0.66176	1	35793	35793		1.4819	0	1		+		30161	11160	14974	15033	34586	34586					0.06312247402092908
RVSRLLSWLS	10	Unmodified	_RVSRLLSWLS_					0	0	0		ENST00000464157.1_1_9:139902696-139903239:-|nuORF	ENST00000464157.1_1_9:139902696-139903239:-|nuORF	ENST00000464157.1_1_9:139902696-139903239:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2446777224541	3	406.24354	1215.70879	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.34	1	103.4	102.9	103.9	0.059502								0	0	0	0.6607	1	43328	43328		1.5923	0.52082	1				30162	6691	14975	15034	34587	34587					0.10956473934015776
RVSRPKPRRN	10	Unmodified	_RVSRPKPRRN_					0	0	0		ENST00000565493.1_1_20:34638316-34638640:-|nuORF	ENST00000565493.1_1_20:34638316-34638640:-|nuORF	ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5915405154228	3	422.593566	1264.75887	0.63894	0.00027001	-3.0042	-0.0012695	-2.3652	-0.00099953	422.5921838510224	36.29	0.4326	36.29	36.151	36.584	0					56	40	2	0	0	0	0.8872	1	15305	15305		2.8433	0.93691	1	10275000			30163	7354	14976	15035	34588	34588					0.13708021382512925
RVSRPKPRRN	10	Unmodified	_RVSRPKPRRN_					0	0	0		ENST00000565493.1_1_20:34638316-34638640:-|nuORF	ENST00000565493.1_1_20:34638316-34638640:-|nuORF	ENST00000565493.1_1_20:34638316-34638640:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5923950076103	3	422.593566	1264.75887	0.65774	0.00027796	-2.7969	-0.001182	-2.1392	-0.000904	422.5923175269455	36.75	0.48708	36.75	36.584	37.071	0					56	24	3	0	0	0	0.89803	1	15490	15490		1.5923	0.37745	1	8115700			30164	7354	14976	15035	34589	34589					0.13708021382512925
RVSTQLPLREL	11	Unmodified	_RVSTQLPLREL_					0	0	0			REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.2625305056572	3	437.929621	1310.76703	0.82981	0.0003634	-3.5542	-0.0015565	-2.7244	-0.0011931	438.2626536949298	28.09	0.55271	29.865	29.418	29.971	1.7754					21	17	2	0	0	0	1.0372	1	11769	11769		1.0136	0.16863	1	621330	+		30165	13366	14977	15036	34590	34590					0.12408110788578597
RVSTQLPLREL	11	Unmodified	_RVSTQLPLREL_					0	0	0			REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	437.929621	1310.76703	0.81846	0.00035843	-3.1718	-0.001389	-2.3534	-0.0010306	437.9283012333402	29.956	0.4908	29.956	29.795	30.286	0	0.17195	0.00029918	NaN	1.0136	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419560	+		30166	13366	14977	15036							0.12408110788578597
RVSTQLPLREL	11	Unmodified	_RVSTQLPLREL_					0	0	0			REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	437.929621	1310.76703	1.5295	0.00066982	-3.6992	-0.00162	-2.1697	-0.00095018	438.2621637672107	29.507	0.33606	29.786	29.62	29.956	0.27929	0.0018133	-0.00039369	NaN	1.0136	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	466830	+		30167	13366	14977	15036							0.12408110788578597
RVSTQLPLREL	11	Unmodified	_RVSTQLPLREL_					0	0	0			REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	REV__ENST00000482015.5_1_7:48129906-48134415:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	437.929621	1310.76703	1.2346	0.00054068	-3.212	-0.0014067	-1.9774	-0.00086597	437.9281567488302	28.251	0.423	29.53	29.306	29.729	1.2789	-0.25435	0.00024637	NaN	1.0136	14	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395340	+		30168	13366	14977	15036							0.12408110788578597
RVSVKALI	8	Unmodified	_RVSVKALI_					0	0	0			REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.2982665896416	2	443.297645	884.580737	3.3777	0.0014973	0.71163	0.00031546	4.0893	0.0018128	443.2978922533356	109.36	0.40385	109.52	109.25	109.65	0.15898					43	18	3	0	0	0	0.89178	1	47430	47430		0.69038	0	1	54246000	+		30169	13685	14978	15037	34591	34591					0.13382958410761603
RVSVKALI	8	Unmodified	_RVSVKALI_					0	0	0			REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	443.297645	884.580737	0.92195	0.0004087	2.8942	0.001283	3.8161	0.0016917	443.29886842760203	109.4	0.22148	109.4	109.28	109.5	0	-0.035467	0.0012848	NaN	0.69038	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8449000	+		30170	13685	14978	15037							0.13382958410761603
RVSVKALI	8	Unmodified	_RVSVKALI_					0	0	0			REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	REV__ENST00000528543.1_1_11:66283182-66287297:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	443.297645	884.580737	3.2335	0.0014334	1.3925	0.0006173	4.626	0.0020507	443.29838807873836	109.34	0.21281	109.39	109.29	109.5	0.048851	-0.048233	-4.6537E-05	NaN	0.69038	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4791300	+		30171	13685	14978	15037							0.13382958410761603
RVSVPVIV	8	Unmodified	_RVSVPVIV_					0	0	0		ENST00000472558.6_1_12:6658018-6658174:-|nuORF	ENST00000472558.6_1_12:6658018-6658174:-|nuORF	ENST00000472558.6_1_12:6658018-6658174:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	868.5638305544853	1	868.561464	867.554188	3.1273	0.0027163	0.97777	0.00084925	4.1051	0.0035655	868.5621421294546	109.32	0.34437	109.48	109.3	109.65	0.1548					50	15	5	0	0	0	0.89051	1	47323	47323		2.3027	0	1	241280000			30172	6755	14979	15038	34592	34592					0.11511269519417056
RVTFLVVAI	9	Unmodified	_RVTFLVVAI_					0	0	0		nc|ENSG00000288611|P48145|NPBWR1	nc|ENSG00000288611|P48145|NPBWR1	nc|ENSG00000288611|P48145|NPBWR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3279907107353	2	509.326402	1016.63825	1.874	0.0009545	-0.79367	-0.00040424	1.0804	0.00055026	509.3257880139376	71.272	0.6012	71.272	71.067	71.668	0					56	18	4	0	0	0	0.74011	1	29837	29837		5.7319	0	1	18799000			30173	8018	14980	15039	34593	34593					0.13059800616315442
RVVERRRRP	9	Unmodified	_RVVERRRRP_					0	0	0		EHMT1-ATP13A1|1|fusion;ENST00000473243.5_1_19:19758362-19760762:-|nuORF;nc|ENSG00000105726|Q9HD20-3|ATP13A1;ENST00000469641.5_1_19:19756247-19760762:-|nuORF;nc|ENSG00000105726|Q9HD20-2|ATP13A1;ENSG00000105726|ENST00000357324|ATP13A1	EHMT1-ATP13A1|1|fusion;ENSG00000105726|ENST00000357324|ATP13A1	ENSG00000105726|ENST00000357324|ATP13A1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	306.0757629275322	4	306.694353	1222.7483	0.12219	3.7474E-05	0.057161	1.7531E-05	0.17935	5.5005E-05	306.94483566747374	29.784	0.61096	31.583	31.234	31.845	1.7987					28	19	2	0	0	0	0.11954	1	12383	12383		0.26902	0	1	799790			30174	442;1539	14981	15040	34594	34594					0.1458403872807139
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	999.6475097537041	1	999.642174	998.634898	3.9209	0.0039195	0.46324	0.00046308	4.3842	0.0043826	999.642580352984	107.64	0.18478	107.8	107.66	107.84	0.15781					29	9	4	0	0	0	0.85019	1	46310	46310		0.52476	0	1	97945000	+		30175	10967	14982	15041	34595	34595					0.13552550562337728
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	999.6463500857353	1	999.642174	998.634898	3.584	0.0035827	0.62186	0.00062164	4.2058	0.0042043	999.6427568908288	107.6	0.18672	107.76	107.66	107.85	0.15795					29	9	4	0	0	0	0.85019	1	46258	46258		0.52476	0	1	110030000	+		30176	10967	14982	15041	34596	34596					0.13552550562337728
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	999.642174	998.634898	1.2207	0.0012203	-1.1896	-0.0011891	0.031175	3.1164E-05	999.6383150385843	107.67	0.13486	107.67	107.58	107.72	0	-0.057408	-0.0018631	NaN	0.52476	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14296000	+		30177	10967	14982	15041							0.13552550562337728
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	999.642174	998.634898	2.9594	0.0029583	1.7694	0.0017687	4.7288	0.0047271	999.6436529346673	107.62	0.15227	107.67	107.6	107.75	0.052452	-0.056762	0.0010947	NaN	0.52476	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15380000	+		30178	10967	14982	15041							0.13552550562337728
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	999.642174	998.634898	3.9209	0.0039195	0.46324	0.00046308	4.3842	0.0043826	999.642580352984	107.64	0.18478	107.8	107.66	107.84	0.15781	0.076818	-0.00021092	NaN	0.52476	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97945000	+		30179	10967	14982	15041							0.13552550562337728
RVVKRIGTA	9	Unmodified	_RVVKRIGTA_					0	0	0			REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	REV__ENST00000570242.1_1_16:31283248-31284932:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	999.642174	998.634898	3.584	0.0035827	0.62186	0.00062164	4.2058	0.0042043	999.6427568908288	107.6	0.18672	107.76	107.66	107.85	0.15795	0.037352	-5.236E-05	NaN	0.52476	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110030000	+		30180	10967	14982	15041							0.13552550562337728
RVVSAQAR	8	Unmodified	_RVVSAQAR_					0	0	0		ENST00000540600.5_1_11:113285027-113346393:-|nuORF	ENST00000540600.5_1_11:113285027-113346393:-|nuORF	ENST00000540600.5_1_11:113285027-113346393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7655212283134	2	443.764501	885.514448	3.1071	0.0013788	-0.78716	-0.00034931	2.3199	0.0010295	443.764070847025	74.742	0.65372	75.066	74.74	75.393	0.32464					54	20	4	0	0	0	0.89178	1	31202	31202		0.69038	0	1	21147000			30181	7215	14983	15042	34597	34597					0.06711142568701689
RVWCDGCYDM	10	Unmodified	_RVWCDGCYDM_					0	0	0		ENST00000572473.1_1_17:79867048-79869264:-|nuORF;ENSG00000185813|ENST00000538936|PCYT2;nc|ENSG00000185813|Q99447-3|PCYT2	ENST00000572473.1_1_17:79867048-79869264:-|nuORF	ENST00000572473.1_1_17:79867048-79869264:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.2399169802666	2	624.235744	1246.45693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.319	1	93.256	92.756	93.756	0.93623								0	0	0	0.6624	1	38878	38878		0.40072	0	1				30182	4760	14984	15043	34598	34598					-0.15643571805708234
RVWCDGCYDM	10	Unmodified	_RVWCDGCYDM_					0	0	0		ENST00000572473.1_1_17:79867048-79869264:-|nuORF;ENSG00000185813|ENST00000538936|PCYT2;nc|ENSG00000185813|Q99447-3|PCYT2	ENST00000572473.1_1_17:79867048-79869264:-|nuORF	ENST00000572473.1_1_17:79867048-79869264:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.2373535037041	2	624.235744	1246.45693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.13	1	119.36	118.86	119.86	0.23128								0	0	0	0.6624	1	51475	51475		0.40072	0	1				30183	4760	14984	15043	34599	34599					-0.15643571805708234
RVWKVPKPRRK	11	Unmodified	_RVWKVPKPRRK_					0	0	0		ENSG00000187166|ENST00000335017|H1-7	ENSG00000187166|ENST00000335017|H1-7	ENSG00000187166|ENST00000335017|H1-7	MSMS	GG20161007_CRH_Patient100_W632_02	4	725.4665405154228	2	725.467504	1448.92046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.03	1	34.855	34.355	35.355	1.8246								0	0	0	0.63775	1	13846	13846		1.1933	0	1				30184	4820	14985	15044	34600	34600					0.21395190415569232
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5571166872978	3	394.557459	1180.65055	-0.17583	-6.9375E-05	-0.078814	-3.1097E-05	-0.25464	-0.00010047	394.5573976152354	35.757	0.62348	35.757	35.497	36.121	0					137	50	4	0	0	0	0.037098	6	15033	14909;14956;14995;15033;15070;15109		78.728	54.938	1	29579000			30185	28	14986	15045	34601;34602;34603;34604;34605;34606	34604					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5565368533134	3	394.557459	1180.65055	-0.16357	-6.4539E-05	-0.12901	-5.09E-05	-0.29258	-0.00011544	394.5574112242081	36.232	0.26041	36.232	36.111	36.372	0					37	26	2	0	0	0	0.075994	2	15147	15147;15189		57.722	39.349	1	13250000			30186	28	14986	15045	34607;34608	34607					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5571777224541	3	394.557459	1180.65055	-0.14193	-5.6E-05	0.2529	9.9783E-05	0.11097	4.3783E-05	394.5574917247338	36.497	0.94133	36.497	36.372	37.313	0					142	59	3	0	0	0	0.070055	9	15268	15268;15311;15349;15390;15433;15483;15524;15566;15613		60.074	41.701	1	12809000			30187	28	14986	15045	34609;34610;34611;34612;34613;34614;34615;34616;34617	34609					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5573303103447	3	394.557459	1180.65055	-0.10902	-4.3016E-05	0.41801	0.00016493	0.30899	0.00012191	394.55756734568195	37.501	0.70637	37.501	37.288	37.994	0					52	24	3	0	0	0	0.11669	5	15656	15656;15704;15749;15802;15908		43.772	30.158	1	5757700			30188	28	14986	15045	34618;34619;34620;34621;34622	34618					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5569030642509	3	394.557459	1180.65055	-0.035637	-1.4061E-05	1.2219	0.00048211	1.1863	0.00046804	394.55793153767274	38.486	3.8435	38.486	37.815	41.659	0					228	133	2	0	0	0	0.086433	25	16173	15857;15974;16034;16080;16126;16173;16217;16258;16301;16350;16388;16433;16484;16537;16586;16642;16688;16743;16794;16859;16912;16966;17013;17128;17374		53.833	35.686	1	2822200			30189	28	14986	15045	34623;34624;34625;34626;34627;34628;34629;34630;34631;34632;34633;34634;34635;34636;34637;34638;34639;34640;34641;34642;34643;34644;34645;34646;34647	34628					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5583679080009	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.209	1	41.209	40.709	41.709	0								0	0	0	0.26308	1	17257	17257		21.537	11.386	1				30190	28	14986	15045	34648	34648					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5584289431572	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.368	1	41.368	40.868	41.868	0								0	0	0	0.19833	1	17321	17321		26.268	13.226	1				30191	28	14986	15045	34649	34649					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5593749880791	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.916	1	41.916	41.416	42.416	0								0	0	0	0.19833	1	17543	17543		26.268	11.02	1				30192	28	14986	15045	34650	34650					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5585204958916	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.054	1	42.054	41.554	42.554	0								0	0	0	0.27844	1	17600	17600		20.415	10.871	1				30193	28	14986	15045	34651	34651					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.5593749880791	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.407	1	47.407	46.907	47.907	0								0	0	0	0.26308	1	19808	19808		21.537	13.381	1				30194	28	14986	15045	34652	34652					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5575744509697	3	394.557459	1180.65055	1.4396	0.00056799	-1.6443	-0.00064879	-0.20478	-8.0796E-05	394.55688489468287	35.055	0.24372	35.355	35.239	35.482	0.29941					27	22	2	0	0	0	0.12216	1	14735	14735		41.956	28.341	1	9143000			30195	28	14986	15045	34653	34653					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5576049685478	3	394.557459	1180.65055	1.4576	0.00057512	-1.4685	-0.00057939	-0.010825	-4.2713E-06	394.55700591081836	35.244	0.48441	35.544	35.498	35.982	0.29942					71	41	3	0	0	0	0.040497	4	14841	14804;14841;14884;14952		75.761	51.971	1	7435400			30196	28	14986	15045	34654;34655;34656;34657	34655					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5572692751884	3	394.557459	1180.65055	1.5148	0.00059767	-0.75255	-0.00029692	0.76223	0.00030074	394.55714746479947	36.422	0.39605	36.724	36.569	36.965	0.30197					53	27	3	0	0	0	0.20244	3	15279	15279;15323;15365		32.786	20.469	1	2632400			30197	28	14986	15045	34658;34659;34660	34658					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5582153201103	3	394.557459	1180.65055	1.5405	0.0006078	-0.54293	-0.00021422	0.99752	0.00039358	394.55742538584263	36.965	0.42481	37.27	37.11	37.535	0.30497					23	19	2	0	0	0	0.40005	1	15547	15547		20.415	11.669	1	1411600			30198	28	14986	15045	34661	34661					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.5573913455009	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.693	1	37.998	37.498	38.498	0.30497								0	0	0	0.27844	1	15853	15853		20.415	10.871	1				30199	28	14986	15045	34662	34662					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.8917114138603	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.853	1	38.158	37.658	38.658	0.30497								0	0	0	0.19833	1	15922	15922		26.268	13.226	1				30200	28	14986	15045	34663	34663					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5570251345634	3	394.557459	1180.65055	-0.070926	-2.7985E-05	-0.66375	-0.00026189	-0.73467	-0.00028987	394.5572081956384	33.558	0.97874	34.833	34.622	35.601	1.2746					213	102	3	0	0	0	0.053939	10	14003	14003;14043;14082;14123;14160;14203;14244;14282;14356;14393		66.457	48.084	1	90569000			30201	28	14986	15045	34664;34665;34666;34667;34668;34669;34670;34671;34672;34673	34664					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3332397341728	2	591.33255	1180.65055	0.52855	0.00031255	-0.22805	-0.00013485	0.3005	0.0001777	591.3325226412567	33.544	0.27567	34.818	34.697	34.973	1.2746					42	25	2	0	0	0	0.031145	2	14054	14054;14092		109.63	82.746	1	8089100			30202	28	14986	15045	34674;34675	34674					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.8916198611259	3	394.557459	1180.65055	-0.14068	-5.5507E-05	0.29548	0.00011658	0.15479	6.1075E-05	394.55763326001255	34.438	0.28756	35.713	35.581	35.868	1.2746					63	34	2	0	0	0	0.053939	2	14471	14432;14471		66.457	48.084	1	27866000			30203	28	14986	15045	34676;34677	34677					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5575439333916	3	394.557459	1180.65055	-0.17422	-6.8739E-05	0.82489	0.00032547	0.65067	0.00025673	394.55779868787056	34.829	0.30424	36.103	35.881	36.185	1.2746					44	29	2	0	0	0	0.075994	3	14595	14541;14595;14638		57.722	39.349	1	11430000			30204	28	14986	15045	34678;34679;34680	34679					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5582458376884	3	394.557459	1180.65055	-0.33514	-0.00013223	1.7185	0.00067806	1.3834	0.00054583	394.5582327415763	36.942	0.94025	38.218	37.359	38.299	1.2762					128	53	3	0	0	0	0.086433	5	15496	15240;15340;15382;15445;15496		53.833	33.418	1	8616300			30205	28	14986	15045	34681;34682;34683;34684;34685	34685					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.8918029665947	3	394.557459	1180.65055	0.78319	0.00030901	-1.1077	-0.00043707	-0.32455	-0.00012805	394.55677935334245	38.004	1.7195	39.288	38.558	40.278	1.284					111	69	2	0	0	0	0.099302	2	15839	15839;15889		49.554	31.181	1	14795000			30206	28	14986	15045	34686;34687	34686					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5581848025322	3	394.557459	1180.65055	1.4285	0.00056362	-0.43572	-0.00017192	0.99276	0.0003917	394.5573835015544	43.022	3.5039	44.362	43.26	46.764	1.3399					175	111	3	0	0	0	0.063746	19	18331	17682;17732;17795;17847;17900;17955;18002;18058;18109;18280;18331;18383;18433;18485;18537;18656;18708;18759;18888		62.573	46.424	1	2854600			30207	28	14986	15045	34688;34689;34690;34691;34692;34693;34694;34695;34696;34697;34698;34699;34700;34701;34702;34703;34704;34705;34706	34698					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5582458376884	3	394.557459	1180.65055	1.4203	0.0005604	-0.58673	-0.0002315	0.8336	0.0003289	394.5571872358206	47.916	1.0331	49.302	48.828	49.861	1.3856					59	32	2	0	0	0	0.1388	6	20170	19972;20021;20070;20122;20170;20215		39.95	23.801	1	1289500			30208	28	14986	15045	34707;34708;34709;34710;34711;34712	34711					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5577270388603	3	394.557459	1180.65055	1.5235	0.00060111	-0.077415	-3.0545E-05	1.4461	0.00057056	394.557138458582	49.917	2.7485	51.308	49.777	52.525	1.3911					111	88	2	0	0	0	0.28372	4	20505	20269;20450;20505;20621		26.268	18.113	1	1567200			30209	28	14986	15045	34713;34714;34715;34716	34715					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5587036013603	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.857	1	30.14	29.64	30.64	1.2825								0	0	0	0.19833	1	12100	12100		26.268	13.396	1				30210	28	14986	15045	34717	34717					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5574218630791	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.157	1	36.432	35.932	36.932	1.2746								0	0	0	0.1299	1	14757	14757		31.268	17.05	1				30211	28	14986	15045	34718	34718					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5571777224541	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.023	1	38.307	37.807	38.807	1.284								0	0	0	0.045037	1	15541	15541		51.63	36.381	1				30212	28	14986	15045	34719	34719					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5572082400322	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.219	1	38.503	38.003	39.003	1.284								0	0	0	0.04981	1	15625	15625		57.722	41.573	1				30213	28	14986	15045	34720	34720					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5584289431572	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.33	1	38.614	38.114	39.114	1.284								0	0	0	0.04981	1	15671	15671		57.722	39.349	1				30214	28	14986	15045	34721	34721					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5580016970634	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.433	1	38.717	38.217	39.217	1.284								0	0	0	0.045037	1	15714	15714		51.63	31.215	1				30215	28	14986	15045	34722	34722					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5573303103447	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.521	1	38.805	38.305	39.305	1.284								0	0	0	0.038408	1	15752	15752		66.457	48.084	1				30216	28	14986	15045	34723	34723					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5580627322197	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.629	1	38.914	38.414	39.414	1.284								0	0	0	0.045037	1	15797	15797		51.63	36.381	1				30217	28	14986	15045	34724	34724					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5566589236259	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.235	1	41.545	41.045	42.045	1.3102								0	0	0	0.19833	1	16876	16876		26.268	14.773	1				30218	28	14986	15045	34725	34725					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5570556521416	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.356	1	41.666	41.166	42.166	1.3102								0	0	0	0.19833	1	16927	16927		26.268	11.02	1				30219	28	14986	15045	34726	34726					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5569030642509	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.476	1	41.786	41.286	42.286	1.3102								0	0	0	0.19833	1	16977	16977		26.268	13.226	1				30220	28	14986	15045	34727	34727					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5568725466728	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.6	1	41.911	41.411	42.411	1.3102								0	0	0	0.10913	1	17028	17028		32.786	16.637	1				30221	28	14986	15045	34728	34728					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5565063357353	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.736	1	42.061	41.561	42.561	1.3254								0	0	0	0.10913	1	17085	17085		32.786	20.545	1				30222	28	14986	15045	34729	34729					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5579101443291	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.854	1	42.179	41.679	42.679	1.3254								0	0	0	0.1299	1	17134	17134		31.268	23.113	1				30223	28	14986	15045	34730	34730					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5573913455009	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.986	1	42.311	41.811	42.811	1.3254								0	0	0	0.19833	1	17188	17188		26.268	18.113	1				30224	28	14986	15045	34731	34731					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5573303103447	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.106	1	42.432	41.932	42.932	1.3254								0	0	0	0.1299	1	17238	17238		31.268	19.774	1				30225	28	14986	15045	34732	34732					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5572387576103	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.244	1	42.57	42.07	43.07	1.3254								0	0	0	0.1299	1	17295	17295		31.268	19.028	1				30226	28	14986	15045	34733	34733					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5575744509697	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.364	1	42.689	42.189	43.189	1.3254								0	0	0	0.04337	1	17344	17344		45.7	28.587	1				30227	28	14986	15045	34734	34734					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5579101443291	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.499	1	42.825	42.325	43.325	1.3254								0	0	0	0.089791	1	17399	17399		36.506	25.011	1				30228	28	14986	15045	34735	34735					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5575439333916	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.617	1	42.943	42.443	43.443	1.3254								0	0	0	0.081361	1	17446	17446		38.176	22.026	1				30229	28	14986	15045	34736	34736					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5561096072197	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.746	1	43.071	42.571	43.571	1.3254								0	0	0	0.10913	1	17500	17500		32.786	19.743	1				30230	28	14986	15045	34737	34737					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5574218630791	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.482	1	48.864	48.364	49.364	1.3825								0	0	0	0.19833	1	19878	19878		26.268	18.113	1				30231	28	14986	15045	34738	34738					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5599548220634	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.92	1	113.09	112.59	113.59	0.16914								0	0	0	0.04341	1	48975	48975		49.554	32.506	1				30232	28	14986	15045	34739	34739					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	395.2270385622978	3	394.557459	1180.65055	1.9555	0.00077157	-0.8685	-0.00034267	1.087	0.00042889	394.55709211272966	65.958	1.1913	67.357	66.476	67.668	1.3989					58	38	2	0	0	0	0.11581	1	27646	27646		11.495	8.1751	1	645250			30233	28	14986	15045	34740	34740					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.5847045779228	3	394.557459	1180.65055	2.4497	0.00096655	1.4326	0.00056523	3.8823	0.0015318	394.5580353364733	60.478	1.5395	61.898	61.176	62.716	1.4196					69	49	2	0	0	0	0.11388	1	25166	25166		15.248	10.351	1	579900			30234	28	14986	15045	34741	34741					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5569946169853	3	394.557459	1180.65055	0.65691	0.00025919	-1.5231	-0.00060095	-0.8662	-0.00034176	394.55666276861757	32.853	0.082748	34.678	34.631	34.714	1.8246					9	5	2	0	0	0	0.20244	1	13770	13770		32.786	24.63	1	2295900			30235	28	14986	15045	34742	34742					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5568725466728	3	394.557459	1180.65055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.208	1	43.101	42.601	43.601	1.8927								0	0	0	0.37238	1	17268	17268		11.495	2.5185	1				30236	28	14986	15045	34743	34743					0.06744837079395438
RVYIHPFHL	9	Unmodified	_RVYIHPFHL_					0	0	0		AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant;ENSG00000135744|ENST00000366667|AGT	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	AGT|p.D245Vfs*26|1|0.15|ENSG00000135744|chr1:230710117-230710118|-/TCTTGACAGAGCCTCCTCAGTGTCTCTTAGACACA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	394.557459	1180.65055	-0.27824	-0.00010978	-0.2626	-0.00010361	-0.54085	-0.00021339	394.55699377436287	35.782	0.45384	37.057	36.903	37.357	1.2746	-0.21921	-0.00029817	NaN	43.772	48	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3729300			30237	28	14986	15045							0.06744837079395438
RVYNIYIRRYV	11	Unmodified	_RVYNIYIRRYV_					0	0	0		ENST00000394361.8_1_16:57596005-57608989:+|nuORF;ENSG00000159618|ENST00000349457|ADGRG5	ENST00000394361.8_1_16:57596005-57608989:+|nuORF	ENST00000394361.8_1_16:57596005-57608989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	758.4371215701103	2	757.93316	1513.85177	2.3035	0.0017459	-0.17614	-0.0001335	2.1274	0.0016124	758.4352349575831	85.658	1.3702	86.785	86.27	87.641	1.1265					349	55	7	0	0	0	1.0405	7	35900	35900;36031;36091;36159;36224;36303;36368		0	0	1	552680000			30238	3536	14987	15046	34744;34745;34746;34747;34748;34749;34750	34744					0.11539481325189627
RVYPQAVYF	9	Unmodified	_RVYPQAVYF_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8038207888603	2	571.803291	1141.59203	1.7271	0.00098754	0.65051	0.00037196	2.3776	0.0013595	571.8037294540602	42.688	0.59775	44.028	43.667	44.265	1.3399					50	18	4	0	0	0	0.13873	2	17923	17884;17923		39.957	21.822	1	9160600			30239	4935	14988	15047	34751;34752	34752					0.026897357142161127
RVYPQAVYF	9	Unmodified	_RVYPQAVYF_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8036376833916	2	571.803291	1141.59203	1.7144	0.00098028	-0.29558	-0.00016901	1.4188	0.00081126	571.8030564964022	42.13	0.55936	44.052	43.698	44.258	1.9211					40	17	4	0	0	0	0.19075	3	17659	17615;17659;17699		34.102	15.967	1	11339000			30240	4935	14988	15047	34753;34754;34755	34754					0.026897357142161127
RWCCPRDN	8	Unmodified	_RWCCPRDN_					0	0	0		ENST00000397195.9_1_17:2541523-2568667:+|nuORF;ENST00000571289.1_1_17:2541523-2541640:+|nuORF	ENST00000397195.9_1_17:2541523-2568667:+|nuORF	ENST00000397195.9_1_17:2541523-2568667:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2244140505791	2	525.223828	1048.4331	2.6445	0.0013889	1.1621	0.00061035	3.8065	0.0019993	525.2245356410759	84.967	0.57726	84.967	84.683	85.261	0					23	17	2	0	0	0	0.89051	1	35399	35399		2.3027	0	1	673280			30241	6307	14989	15048	34756	34756					-0.08917624457217244
RWEQEYLYHRE	11	Unmodified	_RWEQEYLYHRE_					0	0	0		ENSG00000115423|ENST00000389394|DNAH6;nc|ENSG00000115423|Q9C0G6-4|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	ENSG00000115423|ENST00000389394|DNAH6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.2745849490166	3	536.923306	1607.74809	1.9476	0.0010457	2.4288	0.0013041	4.3764	0.0023498	536.9247302516119	66.82	0.56062	68.209	67.966	68.526	1.3887					38	17	3	0	0	0	0.14606	1	28146	28146		1.0136	0.91873	1	1253900			30242	1919	14990	15049	34757	34757					-0.03147470573094324
RWFDKSFTF	9	Unmodified	_RWFDKSFTF_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A;CPT1A|p.L518Sfs*39|1|0.36|ENSG00000110090|chr11:68775339-68775340|-/A|frameshift_variant;nc|ENSG00000110090|P50416-2|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3062621951103	2	617.306198	1232.59784	1.2744	0.00078673	-0.40146	-0.00024783	0.87299	0.0005389	617.3057441211934	53.931	1.5051	55.332	55.072	56.577	1.4005					118	50	3	0	0	0	2.9088E-05	9	22634	22496;22540;22589;22634;22675;22729;22777;22823;22917		163.69	103.61	1	13936000			30243	1695	14991	15050	34758;34759;34760;34761;34762;34763;34764;34765;34766	34761					-0.009151657741085728
RWFDKSFTF	9	Unmodified	_RWFDKSFTF_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A;CPT1A|p.L518Sfs*39|1|0.36|ENSG00000110090|chr11:68775339-68775340|-/A|frameshift_variant;nc|ENSG00000110090|P50416-2|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	411.8730041384697	3	411.873224	1232.59784	1.2792	0.00052687	0.42097	0.00017339	1.7002	0.00070026	411.87335869725615	53.956	1.1808	55.357	55.086	56.267	1.4005					107	38	4	0	0	0	0.066197	6	22565	22518;22565;22617;22661;22702;22758		49.742	40.766	1	9419900			30244	1695	14991	15050	34767;34768;34769;34770;34771;34772	34768					-0.009151657741085728
RWFDKSFTF	9	Unmodified	_RWFDKSFTF_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A;CPT1A|p.L518Sfs*39|1|0.36|ENSG00000110090|chr11:68775339-68775340|-/A|frameshift_variant;nc|ENSG00000110090|P50416-2|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3062621951103	2	617.306198	1232.59784	0.62812	0.00038774	-0.66997	-0.00041358	-0.041854	-2.5836E-05	617.3054047273464	53.464	1.4157	55.433	55.111	56.526	1.9697					110	46	3	0	0	0	3.8363E-05	9	22379	22291;22338;22379;22424;22463;22508;22562;22626;22847		157.8	89.957	1	11747000			30245	1695	14991	15050	34773;34774;34775;34776;34777;34778;34779;34780;34781	34775					-0.009151657741085728
RWFDKSFTF	9	Unmodified	_RWFDKSFTF_					0	0	0		ENSG00000110090|ENST00000265641|CPT1A;CPT1A|p.L518Sfs*39|1|0.36|ENSG00000110090|chr11:68775339-68775340|-/A|frameshift_variant;nc|ENSG00000110090|P50416-2|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	ENSG00000110090|ENST00000265641|CPT1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	411.8736450076103	3	411.873224	1232.59784	0.83376	0.0003434	-0.096013	-3.9545E-05	0.73775	0.00030386	411.87317637926947	53.427	1.4562	55.397	55.128	56.585	1.9697					100	47	3	0	0	0	0.02878	7	22365	22315;22365;22410;22452;22506;22564;22615		73.196	53.834	1	7783900			30246	1695	14991	15050	34782;34783;34784;34785;34786;34787;34788	34783					-0.009151657741085728
RWFPQPTVVW	10	Unmodified	_RWFPQPTVVW_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	658.3513061404228	2	658.35094	1314.68733	1.8662	0.0012286	1.0826	0.00071275	2.9488	0.0019414	658.3519184214946	67.757	0.49331	69.627	69.394	69.887	1.87					27	15	2	0	0	0	0.34658	1	28426	28426		36.506	22.6	1	1091400			30247	158	14992	15051	34789	34789					0.04257088905251294
RWFPQPTVVW	10	Unmodified	_RWFPQPTVVW_					0	0	0		nc|ENSG00000134258|Q7Z7D3-2|VTCN1;chr1:117153369-117170107|354|17.97|0.67|4.74|-|ENST00000328189|VTCN1,VTCN1;nc|ENSG00000134258|Q7Z7D3-4|VTCN1;ENSG00000134258|ENST00000369458|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	nc|ENSG00000134258|Q7Z7D3-2|VTCN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	658.35094	1314.68733	2.0467	0.0013475	1.006	0.00066232	3.0528	0.0020098	658.3514292233909	68.363	0.42509	69.741	69.491	69.916	1.3778	0.057006	-5.6839E-05	NaN	36.506	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1267200			30248	158	14992	15051							0.04257088905251294
RWFQPAIPSW	10	Unmodified	_RWFQPAIPSW_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D;ENST00000591563.5_1_17:73828844-73835996:-|nuORF	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.3363525271416	2	644.33529	1286.65603	1.7453	0.0011246	1.1654	0.00075088	2.9107	0.0018754	644.3357678173323	68.679	0.43718	70.045	69.847	70.284	1.3657					31	13	3	0	0	0	0.28905	1	28843	28843		39.95	24.701	1	1329600			30249	1168	14993	15052	34790	34790					0.024165158711866752
RWFQPAIPSW	10	Unmodified	_RWFQPAIPSW_					0	0	0		ENSG00000092929|ENST00000207549|UNC13D;nc|ENSG00000092929|Q70J99-3|UNC13D;ENST00000591563.5_1_17:73828844-73835996:-|nuORF	ENSG00000092929|ENST00000207549|UNC13D	ENSG00000092929|ENST00000207549|UNC13D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.3364135622978	2	644.33529	1286.65603	2.1591	0.0013912	0.39959	0.00025747	2.5587	0.0016487	644.3353224285075	68.082	0.46762	69.952	69.767	70.234	1.87					25	14	2	0	0	0	0.10797	1	28582	28582		62.573	42.158	1	1526500			30250	1168	14993	15052	34791	34791					0.024165158711866752
RWGNFFNS	8	Unmodified	_RWGNFFNS_					0	0	0		tr|A0A7D6VR86|A0A7D6VR86_9CLOTPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=ClostridiumintestinaleOX=36845GN=lgtPE=3SV=1	tr|A0A7D6VR86|A0A7D6VR86_9CLOTPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=ClostridiumintestinaleOX=36845GN=lgtPE=3SV=1	tr|A0A7D6VR86|A0A7D6VR86_9CLOTPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=ClostridiumintestinaleOX=36845GN=lgtPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2409545779228	2	514.240858	1026.46716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.92	1	101.98	101.48	102.48	0.064606								0	0	0	1.0178	1	42672	42672		2.3027	0	1				30251	16823	14994	15053	34792	34792					-0.04501136702288022
RWGPWRVA	8	Unmodified	_RWGPWRVA_					0	0	0			REV__ENST00000295628.3_1_3:120068041-120068128:-|nuORF	REV__ENST00000295628.3_1_3:120068041-120068128:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1907836794853	3	343.190999	1026.55117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.99	1	104.99	104.49	105.49	0								0	0	0	1.0178	1	44459	44459		1.6526	0	1		+		30252	12290	14995	15054	34793	34793					0.03895439185271243
RWHLLKYHWRP	11	Unmodified	_RWHLLKYHWRP_					0	0	0		chr3:124796817-124821313|160|14.18|0.57|4.65|-|1|ITGB5,ITGB5|1	chr3:124796817-124821313|160|14.18|0.57|4.65|-|1|ITGB5,ITGB5|1	chr3:124796817-124821313|160|14.18|0.57|4.65|-|1|ITGB5,ITGB5|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.2980834841728	3	531.29675	1590.86842	1.8826	0.0010002	0.077659	4.126E-05	1.9603	0.0010415	531.2967930918246	45.052	0.70472	45.378	45.166	45.87	0.32674					57	23	4	0	0	0	1.0365	1	18914	18914		1.2148	0	1	7939500			30253	255	14996	15055	34794	34794					0.0966202700183203
RWHRKRRKLL	10	Unmodified	_RWHRKRRKLL_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	483.6460143923759	3	483.644372	1447.91129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.117	1	35.417	34.917	35.917	0.29942								0	0	0	0.66254	1	14753	14753		0.15932	0.064481	1				30254	6411	14997	15056	34795	34795					0.2052484184991954
RWKFRAMRKIK	11	Unmodified	_RWKFRAMRKIK_					0	0	0		ENST00000530606.1_1_10:77055306-77055468:+|nuORF	ENST00000530606.1_1_10:77055306-77055468:+|nuORF	ENST00000530606.1_1_10:77055306-77055468:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3128234744072	3	507.310002	1518.90818	2.3548	0.0011946	0.064648	3.2796E-05	2.4195	0.0012274	507.31036995838133	91.455	0.53683	91.455	91.125	91.662	0					28	16	2	0	0	0	1.0405	1	38194	38194		0	0	1	618790			30255	7164	14998	15057	34796	34796					0.16947830680874176
RWKQQNLKKEK	11	Unmodified	_RWKQQNLKKEK_					0	0	0		ENSG00000127831|ENST00000248444|VIL1	ENSG00000127831|ENST00000248444|VIL1	ENSG00000127831|ENST00000248444|VIL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9620849490166	3	495.959803	1484.85758	4.8226	0.0023918	-1.4239	-0.0007062	3.3987	0.0016856	495.9589929754417	89.991	1.8746	91.011	90.203	92.077	1.0199					116	58	4	0	0	0	1.0395	1	38126	38126		0.08335	0.010087	1	3813600			30256	2345	14999	15058	34797	34797					0.13454579836866287
RWKQRLLYSLL	11	Unmodified	_RWKQRLLYSLL_					0	0	0			REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	738.4520751833916	2	738.445903	1474.87725	4.7189	0.0034846	3.9055	0.002884	8.6244	0.0063686	738.4482948655962	88.154	0.35313	89.21	89.08	89.434	1.0562					17	10	2	0	0	0	1.0362	1	37229	37229		1.3295	0.9789	1	1324700	+		30257	12925	15000	15059	34798	34798					0.15880955847683254
RWKQRLLYSLL	11	Unmodified	_RWKQRLLYSLL_					0	0	0			REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	738.445903	1474.87725	4.7189	0.0034846	3.9055	0.002884	8.6244	0.0063686	738.4482948655962	88.154	0.35313	89.21	89.08	89.434	1.0562	0.12689	0.00087827	NaN	1.3295	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1324700	+		30258	12925	15000	15059							0.15880955847683254
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.7674133181572	4	409.764638	1635.02945	0.41894	0.00017167	3.8695	0.0015856	4.2884	0.0017572	409.76666238977015	39.963	0.31866	39.963	39.82	40.138	0					17	9	2	0	0	0	1.0405	1	16772	16772		0	0	1	703890			30259	5870	15001	15060	34799	34799					0.2373321415841474
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2119628787041	5	328.013166	1635.02945	-2.4925	-0.00081758	-3.7651	-0.001235	-6.2577	-0.0020526	328.2124757025603	103.95	0.34357	103.95	103.84	104.19	0					27	17	2	0	0	0	1.0405	1	43744	43744		0	0	1	606330000			30260	5870	15001	15060	34800	34800					0.2373321415841474
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.0625793337822	5	328.013166	1635.02945	-1.9267	-0.00063197	-0.73892	-0.00024238	-2.6656	-0.00087435	328.2138562348961	73.928	0.43615	73.928	73.611	74.047	0					19	13	2	0	0	0	0.14606	1	30822	30822		0	0	1	550250			30261	5870	15001	15060	34801	34801					0.2373321415841474
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.2128784060478	5	328.013166	1635.02945	0.85445	0.00028027	-1.7897	-0.00058706	-0.9353	-0.00030679	328.012629820738	36.331	0.49931	36.633	36.507	37.007	0.30197					114	35	4	0	0	0	0.14606	1	15419	15419		0	0	1	9789200			30262	5870	15001	15060	34802	34802					0.2373321415841474
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.2026550173759	5	328.013166	1635.02945	0.9595	0.00031473	-2.0019	-0.00065666	-1.0424	-0.00034193	328.01238537496664	38.371	0.73273	38.679	38.389	39.122	0.30857					108	39	4	0	0	0	0.14606	1	16323	16323		0.08335	0.08335	1	3647300			30263	5870	15001	15060	34803	34803					0.2373321415841474
RWKRRRRRRLP	11	Unmodified	_RWKRRRRRRLP_					0	0	0		ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	ENST00000326402.8_2_11:92930946-92931072:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.2021057009697	5	328.013166	1635.02945	-0.13677	-4.4862E-05	-0.65302	-0.0002142	-0.78979	-0.00025906	328.01241544837785	37.885	0.62401	39.169	38.838	39.462	1.284					25	21	2	0	0	0	0.14606	1	15775	15775		0	0	1	1344700			30264	5870	15001	15060	34804	34804					0.2373321415841474
RWKRYRGRLQR	11	Unmodified	_RWKRYRGRLQR_					0	0	0		ENST00000377084.3_1_13:84455547-84455634:-|nuORF	ENST00000377084.3_1_13:84455547-84455634:-|nuORF	ENST00000377084.3_1_13:84455547-84455634:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	787.9663574099541	2	787.966191	1573.91783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.42	1	117.63	117.13	118.13	0.21096								0	0	0	0.63775	1	50785	50785		0	0	1				30265	6194	15002	15061	34805	34805					0.15382735010643955
RWKTLYAS	8	Unmodified	_RWKTLYAS_					0	0	0			REV__tr|A0A553SMI8|A0A553SMI8_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_22545PE=4SV=1	REV__tr|A0A553SMI8|A0A553SMI8_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_22545PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.1913940310478	3	342.190665	1023.55016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.83	1	104.99	104.49	105.49	0.15859								0	0	0	1.0178	1	44517	44517		1.4819	1.0812	1		+		30266	15021	15003	15062	34806	34806					0.03933180025705951
RWKWALKIVYI	11	Unmodified	_RWKWALKIVYI_					0	0	0		ENST00000489656.5_1_10:70917876-70917945:+|nuORF	ENST00000489656.5_1_10:70917876-70917945:+|nuORF	ENST00000489656.5_1_10:70917876-70917945:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6346313357353	3	492.634368	1474.88128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.892	1	88.892	88.392	89.392	0								0	0	0	0.63775	1	37162	37162		3.0723	2.5663	1				30267	6896	15004	15063	34807	34807					0.16283045341356228
RWLGLLSVP	9	Unmodified	_RWLGLLSVP_					0	0	0		ENSG00000108179|ENST00000225174|PPIF;ENST00000492149.1_1_10:81107262-81109515:+|nuORF;nc|ENSG00000108179|P30405-2|PPIF	ENSG00000108179|ENST00000225174|PPIF	ENSG00000108179|ENST00000225174|PPIF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5485717654228	3	347.54656	1039.61785	1.3457	0.0004677	2.6562	0.00092315	4.0019	0.0013908	347.5477493687869	41.69	0.62015	43.582	43.269	43.889	1.8927					36	19	2	0	0	0	0.77876	1	17507	17507		4.1895	0	1	2826600			30268	1624	15005	15064	34808	34808					0.09962629956521596
RWLRSGKCWR	10	Unmodified	_RWLRSGKCWR_					0	0	0			REV__chr16:2029231-2029582|116|32.23|0.75|5.43|+|1|None,NHERF2|2	REV__chr16:2029231-2029582|116|32.23|0.75|5.43|+|1|None,NHERF2|2	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.9123718142509	3	449.912019	1346.71423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8546	1	5.8546	5.3546	6.3546	0								0	0	0	0.66264	1	2406	2406		0	0	1		+		30269	8265	15006	15065	34809	34809					0.05473874244785293
RWMDQRLVF	9	Unmodified	_RWMDQRLVF_					0	0	0		ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.8296996951103	2	625.826775	1249.639	2.043	0.0012786	0.75031	0.00046956	2.7933	0.0017481	625.8277980399951	47.307	0.28896	48.69	48.536	48.825	1.3825					19	8	3	0	0	0	0.20244	1	19815	19815		32.786	13.424	1	1219800			30270	1176	15007	15066	34810	34810					0.024162719937066868
RWMDQRLVF	9	Unmodified	_RWMDQRLVF_					0	0	0		ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3280517458916	2	625.826775	1249.639	1.5273	0.0009558	-1.3249	-0.00082917	0.20233	0.00012662	625.8262809065103	46.832	0.3131	48.808	48.653	48.966	1.976					15	9	2	0	0	0	0.55689	1	19619	19619		13.042	4.2971	1	742010			30271	1176	15007	15066	34811	34811					0.024162719937066868
RWMDQRLVF	9	Unmodified	_RWMDQRLVF_					0	0	0		ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.8323242068291	2	625.826775	1249.639	2.061	0.0012898	1.4049	0.00087921	3.4659	0.002169	625.8282862191321	47.375	0.49149	49.351	49.063	49.555	1.976					22	15	2	0	0	0	0.71526	1	19868	19868		6.7232	3.4419	1	621690			30272	1176	15007	15066	34812	34812					0.024162719937066868
RWMDQRLVF	9	Unmodified	_RWMDQRLVF_					0	0	0		ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	ENSG00000094755|ENST00000265294|GABRP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	625.826775	1249.639	1.827	0.0011434	1.1014	0.00068927	2.9284	0.0018327	625.8278372303023	47.775	0.78629	49.157	48.858	49.644	1.3825	-0.097001	-0.00015018	NaN	6.7232	35	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810080			30273	1176	15007	15066							0.024162719937066868
RWNRYRIHHLV	11	Unmodified	_RWNRYRIHHLV_					0	0	0			REV__ENSG00000158258|ENST00000458420|CLSTN2	REV__ENSG00000158258|ENST00000458420|CLSTN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6285278201103	3	517.291887	1548.85383	2.0814	0.0010767	-0.28795	-0.00014895	1.7935	0.00092776	517.2913100871673	41.243	4.5859	43.135	41.986	46.572	1.8927					387	147	4	0	0	0	1.0388	1	18306	18306		0.50596	0	1	11438000	+		30274	10552	15008	15067	34813	34813					0.10135954853694784
RWPWRWCWRRW	11	Unmodified	_RWPWRWCWRRW_					0	0	0			REV__nc|ENSG00000127252|Q9HDD0-2|PLAAT1	REV__nc|ENSG00000127252|Q9HDD0-2|PLAAT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	887.4471923708916	2	887.444037	1772.87352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.48	1	97.787	97.287	98.287	0.3062								0	0	0	0.63775	1	41007	41007		0.30703	0.30703	1		+		30275	14424	15009	15068	34814	34814					0.018000075927602666
RWQELLETHWM	11	Unmodified	_RWQELLETHWM_					0	0	0		ENST00000515090.5_1_4:176594985-176622825:-|nuORF	ENST00000515090.5_1_4:176594985-176622825:-|nuORF	ENST00000515090.5_1_4:176594985-176622825:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2530395388603	3	510.250366	1527.72927	0.41925	0.00021392	2.9217	0.0014908	3.3409	0.0017047	510.58599172690487	13.175	0.097877	14.002	13.934	14.032	0.82789					6	3	2	0	0	0	1.039	1	5462	5462		0.45452	0	1	390500			30276	7051	15010	15069	34815	34815					-0.013487234685271687
RWQVFEVHTGP	11	Unmodified	_RWQVFEVHTGP_					0	0	0		ENST00000389772.8_1_22:45182465-45204216:+|nuORF	ENST00000389772.8_1_22:45182465-45204216:+|nuORF	ENST00000389772.8_1_22:45182465-45204216:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	339.6762573122978	4	339.676831	1354.67822	-2.8449	-0.00096635	0.56073	0.00019047	-2.2842	-0.00077588	339.6769799214411	11.436	0.52316	11.436	11.325	11.849	0					33	16	3	0	0	0	0.9945	1	4722	4722		4.1166	3.0069	1	1863400			30277	6247	15011	15070	34816	34816					0.015066955489373868
RWRKLFWRLKM	11	Unmodified	_RWRKLFWRLKM_					0	0	0			REV__nc|ENSG00000149639|O94964-4|MTCL2	REV__nc|ENSG00000149639|O94964-4|MTCL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	810.4783203005791	2	810.477015	1618.93948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.06	1	105.22	104.72	105.72	0.15859								0	0	0	0.63775	1	44663	44663		0	0	1		+		30278	8155	15012	15071	34817	34817					0.15476403714978915
RWRKRWRRWRW	11	Unmodified	_RWRKRWRRWRW_					0	0	0		ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	ENST00000261427.9_1_4:39699814-39699901:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	914.5253173708916	2	914.521999	1827.02945	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.385	1	98.642	98.142	99.142	0.25636								0	0	0	0.63775	1	41402	41402		0	0	1				30279	5623	15013	15072	34818	34818					0.14901214158408038
RWRLRPRQRPL	11	Unmodified	_RWRLRPRQRPL_					0	0	0		ENST00000331593.5_1_1:39957407-39957644:+|nuORF	ENST00000331593.5_1_1:39957407-39957644:+|nuORF	ENST00000331593.5_1_1:39957407-39957644:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	511.6503173708916	3	511.983165	1532.92767	3.6513	0.0018694	0.60948	0.00031204	4.2608	0.0021814	511.98309796469863	98.062	0.1116	98.318	98.276	98.387	0.25636					5	3	2	0	0	0	0.14606	1	41265	41265		0.094841	0.094841	1	6629600			30280	5895	15014	15073	34819	34819					0.1825192301600964
RWRMHKKKHKR	11	Unmodified	_RWRMHKKKHKR_					0	0	0			REV__ENSG00000205857|ENST00000382119|NANOGNB	REV__ENSG00000205857|ENST00000382119|NANOGNB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.9883300662041	3	530.9844	1589.93137	1.8934	0.0010054	2.4073	0.0012782	4.3007	0.0022836	531.3198965820335	94.016	1.3444	94.016	93.296	94.641	0					86	42	3	0	0	0	1.0402	1	39335	39335		0.08335	0.08335	1	1146300	+		30281	11821	15015	15074	34820	34820					0.1600026951819018
RWSIRVNP	8	Unmodified	_RWSIRVNP_					0	0	0			REV__ENSG00000121716|ENST00000609309|PILRB	REV__ENSG00000121716|ENST00000609309|PILRB	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2949096560478	2	514.293425	1026.5723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.984	1	46.313	45.813	46.813	0.32899								0	0	0	1.0178	1	19300	19300		3.9444	1.6417	1		+		30282	9593	15016	15075	34821	34821					0.06007404494130242
RWSPVRPLVF	10	Unmodified	_RWSPVRPLVF_					0	0	0		ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	419.5799743533134	3	419.580264	1255.71896	0.74695	0.0003134	0.15383	6.4542E-05	0.90077	0.00037795	419.5803293178732	52.709	0.97612	54.106	53.712	54.688	1.3966					76	30	3	0	0	0	0.48678	5	22055	22010;22055;22106;22147;22199		28.181	9.497	1	8033600			30283	2065	15017	15076	34822;34823;34824;34825;34826	34823					0.10133081659205345
RWSPVRPLVF	10	Unmodified	_RWSPVRPLVF_					0	0	0		ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.8662597537041	2	628.866757	1255.71896	0.58687	0.00036906	1.7392	0.0010937	2.3261	0.0014628	628.8683476360827	52.751	0.88647	54.15	53.745	54.632	1.3985					59	27	3	0	0	0	0.25633	4	22074	22011;22074;22123;22186		55.235	27.606	1	2814600			30284	2065	15017	15076	34827;34828;34829;34830	34828					0.10133081659205345
RWSPVRPLVF	10	Unmodified	_RWSPVRPLVF_					0	0	0		ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.8676635622978	2	628.866757	1255.71896	0.81852	0.00051474	1.4512	0.00091261	2.2697	0.0014273	628.8675156593383	52.06	1.0271	54.032	53.647	54.674	1.9722					66	32	3	0	0	0	0.1773	6	21809	21759;21809;21862;21913;21977;22031		59.368	28.732	1	4154300			30285	2065	15017	15076	34831;34832;34833;34834;34835;34836	34832					0.10133081659205345
RWSPVRPLVF	10	Unmodified	_RWSPVRPLVF_					0	0	0		ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	ENSG00000119333|ENST00000372715|DYNC2I2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	419.5809509158134	3	419.580264	1255.71896	1.295	0.00054334	-0.25709	-0.00010787	1.0379	0.00043546	419.5801296822856	51.997	1.0589	53.969	53.647	54.705	1.9722					83	33	3	0	0	0	0.57898	4	21833	21784;21833;21885;21997		23.964	8.7975	1	7009000			30286	2065	15017	15076	34837;34838;34839;34840	34838					0.10133081659205345
RWSRRTLYVQ	10	Unmodified	_RWSRRTLYVQ_					0	0	0		ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	682.8824951052666	2	682.880927	1363.7473	1.3185	0.00090038	0.71927	0.00049117	2.0378	0.0013916	682.8817096084231	41.657	0.25702	43.55	43.413	43.67	1.8927					13	7	2	0	0	0	0.78468	1	17460	17460		13.906	0.86358	1	788320			30287	5615	15018	15077	34841	34841					0.07997779568518126
RWSRRTLYVQ	10	Unmodified	_RWSRRTLYVQ_					0	0	0		ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	682.880927	1363.7473	1.7139	0.0011704	-2.3623	-0.0016132	-0.64845	-0.00044282	683.3802097816806	43.381	0.12799	43.705	43.643	43.771	0.32389	0.12257	-0.0032911	NaN	13.906	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244720			30288	5615	15018	15077							0.07997779568518126
RWSRRTLYVQ	10	Unmodified	_RWSRRTLYVQ_					0	0	0		ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	682.880927	1363.7473	1.6309	0.0011137	1.3346	0.00091136	2.9654	0.002025	682.8815174312148	42.152	0.22061	43.492	43.382	43.602	1.3399	-0.090223	0.001758	NaN	13.906	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370670			30289	5615	15018	15077							0.07997779568518126
RWSRRTLYVQ	10	Unmodified	_RWSRRTLYVQ_					0	0	0		ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	ENST00000260662.2_1_2:25016783-25022552:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	682.880927	1363.7473	1.3185	0.00090038	0.71927	0.00049117	2.0378	0.0013916	682.8817096084231	41.657	0.25702	43.55	43.413	43.67	1.8927	-0.032344	0.00091767	NaN	13.906	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	788320			30290	5615	15018	15077							0.07997779568518126
RWSRRWQES	9	Unmodified	_RWSRRWQES_					0	0	0		nc|ENSG00000038427|P13611-4|VCAN;nc|ENSG00000038427|P13611-3|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;ENSG00000038427|ENST00000265077|VCAN	nc|ENSG00000038427|P13611-4|VCAN	nc|ENSG00000038427|P13611-4|VCAN	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888427615166	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.949	1	90.949	90.449	91.449	0								0	0	0	0.42693	1	38012	38012		0.96228	0	1				30291	655	15019	15078	34842	34842					0.0045177394920301595
RWSRRWQES	9	Unmodified	_RWSRRWQES_					0	0	0		nc|ENSG00000038427|P13611-4|VCAN;nc|ENSG00000038427|P13611-3|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;ENSG00000038427|ENST00000265077|VCAN	nc|ENSG00000038427|P13611-4|VCAN	nc|ENSG00000038427|P13611-4|VCAN	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8904296755791	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.006	1	91.41	90.91	91.91	1.4045								0	0	0	0.42693	1	37915	37915		0.96228	0	1				30292	655	15019	15078	34843	34843					0.0045177394920301595
RWSRRWQES	9	Unmodified	_RWSRRWQES_					0	0	0		nc|ENSG00000038427|P13611-4|VCAN;nc|ENSG00000038427|P13611-3|VCAN;ENST00000513016.5_1_5:82832752-82876250:+|nuORF;nc|ENSG00000038427|P13611-2|VCAN;ENSG00000038427|ENST00000265077|VCAN	nc|ENSG00000038427|P13611-4|VCAN	nc|ENSG00000038427|P13611-4|VCAN	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8894836306572	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.129	1	91.534	91.034	92.034	1.4045								0	0	0	0.42693	1	37966	37966		0.96228	0	1				30293	655	15019	15078	34844	34844					0.0045177394920301595
RWSWILIL	8	Unmodified	_RWSWILIL_					0	0	0		nc|ENSG00000211697|A0A0B4J1U4|TRGV5	nc|ENSG00000211697|A0A0B4J1U4|TRGV5	nc|ENSG00000211697|A0A0B4J1U4|TRGV5	MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8284789919853	2	543.826569	1085.63859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.652	1	98.879	98.379	99.379	0.22776								0	0	0	1.0178	1	41534	41534		32.305	9.5692	1				30294	7987	15020	15079	34845	34845					0.09919220336200851
RWWTGRPCLWR	11	Unmodified	_RWWTGRPCLWR_					0	0	0			REV__ENST00000438382.2_1_7:74578217-74578785:-|nuORF	REV__ENST00000438382.2_1_7:74578217-74578785:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2611266970634	3	506.26294	1515.76699	0.15882	8.0405E-05	-1.506	-0.00076242	-1.3472	-0.00068201	506.2620542335052	13.496	0.44476	14.324	14.166	14.61	0.82788					33	14	4	0	0	0	1.0254	1	5585	5585		2.2527	0.66045	1	1882800	+		30295	13067	15021	15080	34846	34846					0.029738323076117013
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9646484255791	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.796	1	21.796	21.296	22.296	0								0	0	0	0.63775	1	9063	9063		2.084	1.6295	1		+		30296	9456	15022	15081	34847	34847					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9642822146416	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.228	1	22.228	21.728	22.728	0								0	0	0	0.63775	1	9245	9245		2.084	1.7173	1		+		30297	9456	15022	15081	34848	34848					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9643432497978	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.351	1	22.351	21.851	22.851	0								0	0	0	0.63775	1	9297	9297		0.36667	0.22678	1		+		30298	9456	15022	15081	34849	34849					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9637939333916	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.476	1	22.476	21.976	22.976	0								0	0	0	0.63775	1	9349	9349		2.084	1.6295	1		+		30299	9456	15022	15081	34850	34850					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9637328982353	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.582	1	22.582	22.082	23.082	0								0	0	0	0.63775	1	9397	9397		2.084	1.6295	1		+		30300	9456	15022	15081	34851	34851					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.9633056521416	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.877	1	22.877	22.377	23.377	0								0	0	0	0.63775	1	9529	9529		2.084	1.7173	1		+		30301	9456	15022	15081	34852	34852					0.08998151877017335
RWYHRKRLNDR	11	Unmodified	_RWYHRKRLNDR_					0	0	0			REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	REV__PRKD3|p.Q586Tfs*11|1|0.12|ENSG00000115825|chr2:37269636-37269637|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.9635497927666	3	533.96243	1598.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.017	1	19.211	18.711	19.711	0.19342								0	0	0	0.63775	1	7897	7897		1.1098	0.96986	1		+		30302	9456	15022	15081	34853	34853					0.08998151877017335
RWYSFWEL	8	Unmodified	_RWYSFWEL_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.7870971560478	2	593.787641	1185.56073	1.9913	0.0011824	-2.6145	-0.0015525	-0.62317	-0.00037003	593.785885148029	72.631	0.85335	72.631	72.173	73.027	0					40	26	2	0	0	0	0.89178	1	30188	30188		0.69038	0.088878	1	416330	+		30303	15572	15023	15082	34854	34854					-0.024628373198765985
RYAEAVQLL	9	Unmodified	_RYAEAVQLL_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8021118044853	2	531.800749	1061.58694	2.3485	0.0012489	0.94897	0.00050467	3.2974	0.0017536	531.8011713076204	41.309	0.50904	42.634	42.399	42.908	1.3254					47	15	4	0	0	0	0.053939	1	17350	17350		66.457	8.9853	1	13376000			30304	4956	15024	15083	34855	34855					0.058614318515992636
RYAEAVQLL	9	Unmodified	_RYAEAVQLL_					0	0	0		ENSG00000196659|ENST00000408939|TTC30B;ENSG00000197557|ENST00000355689|TTC30A	ENSG00000196659|ENST00000408939|TTC30B	ENSG00000196659|ENST00000408939|TTC30B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	531.800749	1061.58694	2.3101	0.0012285	0.62982	0.00033494	2.9399	0.0015635	531.8010580919614	40.866	0.47558	42.759	42.515	42.991	1.8927	0.062176	-0.0001093	NaN	66.457	41	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11524000			30305	4956	15024	15083							0.058614318515992636
RYAEEVGIFF	10	Unmodified	_RYAEEVGIFF_					0	0	0		ENST00000480925.1_1_9:100819090-100823312:+|nuORF;ENST00000495319.1_1_9:100819090-100837887:+|nuORF;ENSG00000095380|ENST00000210444|NANS	ENST00000480925.1_1_9:100819090-100823312:+|nuORF	ENST00000480925.1_1_9:100819090-100823312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.8125488162041	2	615.811313	1229.60807	2.7138	0.0016712	-2.4044	-0.0014806	0.3094	0.00019053	615.8095607539506	63.074	0.53069	64.487	64.254	64.785	1.4134					40	16	3	0	0	0	0.31135	1	26431	26431		38.615	13.215	1	2914700			30306	1185	15025	15084	34856	34856					0.002453971604609251
RYAEEVGIFF	10	Unmodified	_RYAEEVGIFF_					0	0	0		ENST00000480925.1_1_9:100819090-100823312:+|nuORF;ENST00000495319.1_1_9:100819090-100837887:+|nuORF;ENSG00000095380|ENST00000210444|NANS	ENST00000480925.1_1_9:100819090-100823312:+|nuORF	ENST00000480925.1_1_9:100819090-100823312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	615.8126098513603	2	615.811313	1229.60807	2.7103	0.001669	-2.4221	-0.0014916	0.28814	0.00017744	615.8099208136957	62.451	0.46413	64.406	64.235	64.699	1.9551					44	14	4	0	0	0	0.63089	1	26209	26209		21.59	6.3417	1	3119700			30307	1185	15025	15084	34857	34857					0.002453971604609251
RYAIKILAI	9	Unmodified	_RYAIKILAI_					0	0	0		TTC12|p.L695Afs*10|1|0.03|ENSG00000149292|chr11:113366264-113366265|-/G|frameshift_variant;ENSG00000149292|ENST00000529221|TTC12;nc|ENSG00000149292|Q9H892-2|TTC12	TTC12|p.L695Afs*10|1|0.03|ENSG00000149292|chr11:113366264-113366265|-/G|frameshift_variant	TTC12|p.L695Afs*10|1|0.03|ENSG00000149292|chr11:113366264-113366265|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.3044921755791	2	530.847502	1059.68045	2.4065	0.0012775	-2.6394	-0.0014011	-0.23283	-0.0001236	530.8470436605177	47.62	0.22147	49.002	48.858	49.079	1.3825					10	6	2	0	0	0	0.10844	1	19923	19923		16.942	0	1	377280			30308	3236	15026	15085	34858	34858					0.15299776024676248
RYALQMEQL	9	Oxidation (M)	_RYALQM(Oxidation (M))EQL_		RYALQM(1)EQL		RYALQM(52)EQL	0	0	1		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2958862185478	2	584.294973	1166.57539	1.0603	0.00061955	0.52254	0.00030532	1.5829	0.00092487	584.2958474001325	27.473	0.49497	28.752	28.534	29.029	1.2789					33	15	3	0	0	0	0.093059	1	11538	11538		51.63	27.609	1	2132400			30309	1724	15027	15086	34859	34859		29			-0.0012313323402395326
RYALQMEQL	9	Unmodified	_RYALQMEQL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2987548708916	2	576.297516	1150.58048	2.2509	0.0012972	-0.26185	-0.0001509	1.9891	0.0011463	576.2976199211522	40.988	0.50077	42.313	42.023	42.524	1.3254					56	15	5	0	0	0	0.037098	3	17193	17156;17193;17233		78.728	28.795	1	17847000			30310	1724	15027	15087	34860;34861;34862	34861					0.011211706285848777
RYALQMEQL	9	Unmodified	_RYALQMEQL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53344429-53346127:+|nuORF;ENST00000411618.1_1_9:30799684-30799825:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.2989379763603	2	576.297516	1150.58048	2.1361	0.001231	-0.53676	-0.00030933	1.5993	0.00092168	576.2974530330685	40.546	0.44131	42.408	42.201	42.642	1.8624					52	13	5	0	0	0	0.015029	4	16997	16949;16997;17037;17083		103.35	44.675	1	17753000			30311	1724	15027	15087	34863;34864;34865;34866	34864					0.011211706285848777
RYAVEILTW	9	Unmodified	_RYAVEILTW_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8177978396416	2	575.816399	1149.61824	2.8685	0.0016517	0.27701	0.00015951	3.1455	0.0018112	575.8164130300408	64.268	0.76922	65.675	65.401	66.17	1.4071					56	24	4	0	0	0	0.037098	4	26938	26894;26938;26988;27035		78.728	19.36	1	20030000			30312	621	15028	15088	34867;34868;34869;34870	34868					0.04942004885697315
RYAVEILTW	9	Unmodified	_RYAVEILTW_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-2|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8179809451103	2	575.816399	1149.61824	2.8563	0.0016447	0.013408	7.7203E-06	2.8697	0.0016524	575.8162709974634	63.638	0.74735	65.583	65.377	66.124	1.9444					53	23	4	0	0	0	0.037098	3	26678	26678;26727;26781		78.728	23.225	1	17975000			30313	621	15028	15088	34871;34872;34873	34871					0.04942004885697315
RYAVVLNATW	10	Unmodified	_RYAVVLNATW_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8267700076103	2	596.827298	1191.64004	1.1564	0.00069017	-0.89404	-0.00053359	0.26235	0.00015658	596.8265883834047	52.239	0.1889	53.636	53.554	53.743	1.3966					9	5	2	0	0	0	0.40874	1	21867	21867		32.786	5.1569	1	1109800			30314	1201	15029	15089	34874	34874					0.05188809634273639
RYAVVLNATW	10	Unmodified	_RYAVVLNATW_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8265258669853	2	596.827298	1191.64004	0.86963	0.00051902	0.22173	0.00013233	1.0914	0.00065135	596.8270689361436	51.705	0.2515	53.677	53.488	53.739	1.9722					16	7	3	0	0	0	0.28905	2	21630	21630;21684		39.95	14.155	1	1601500			30315	1201	15029	15089	34875;34876	34875					0.05188809634273639
RYCLIARL	8	Unmodified	_RYCLIARL_					0	0	0			REV__ENSG00000108702|ENST00000225842|CCL1	REV__ENSG00000108702|ENST00000225842|CCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2944824099541	2	504.294579	1006.57461	1.8644	0.00094022	-0.63614	-0.0003208	1.2283	0.00061942	504.29427764201455	79.732	0.27737	79.732	79.609	79.887	0					18	8	3	0	0	0	0.88163	2	33179	33179;33231		7.9102	2.6795	1	1421700	+		30316	9262	15030	15090	34877;34878	34877					0.07158116907589829
RYCLIARL	8	Unmodified	_RYCLIARL_					0	0	0			REV__ENSG00000108702|ENST00000225842|CCL1	REV__ENSG00000108702|ENST00000225842|CCL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2939636111259	2	504.294579	1006.57461	2.1494	0.0010839	-2.668	-0.0013455	-0.51868	-0.00026157	504.2925563598948	79.118	0.28004	79.418	79.31	79.59	0.30047					13	8	2	0	0	0	0.88163	1	33090	33090		7.9102	2.1497	1	1469600	+		30317	9262	15030	15090	34879	34879					0.07158116907589829
RYCLIARL	8	Unmodified	_RYCLIARL_					0	0	0			REV__ENSG00000108702|ENST00000225842|CCL1	REV__ENSG00000108702|ENST00000225842|CCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2941467165947	2	504.294579	1006.57461	2.763	0.0013933	-3.2122	-0.0016199	-0.44928	-0.00022657	504.2922489111773	78.167	0.47989	79.448	79.229	79.709	1.2809					35	15	3	0	0	0	0.79422	1	32818	32818		21.747	2.3076	1	4589400	+		30318	9262	15030	15090	34880	34880					0.07158116907589829
RYEGFFSLW	9	Unmodified	_RYEGFFSLW_					0	0	0		nc|ENSG00000108528|Q02978-2|SLC25A11;ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF	nc|ENSG00000108528|Q02978-2|SLC25A11	nc|ENSG00000108528|Q02978-2|SLC25A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.7948486208916	2	602.792924	1203.57129	2.6616	0.0016044	-1.6017	-0.00096546	1.0599	0.00063891	602.7923535966875	80.022	0.55811	81.274	81.017	81.575	1.2512					32	17	3	0	0	0	0.33297	1	33563	33563		23.79	2.0431	1	1209000			30319	1638	15031	15091	34881	34881					-0.022348546654257007
RYEGFFSLW	9	Unmodified	_RYEGFFSLW_					0	0	0		nc|ENSG00000108528|Q02978-2|SLC25A11;ENSG00000108528|ENST00000225665|SLC25A11;ENST00000574710.1_1_17:4841038-4842521:-|nuORF	nc|ENSG00000108528|Q02978-2|SLC25A11	nc|ENSG00000108528|Q02978-2|SLC25A11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.7939941287041	2	602.792924	1203.57129	1.7091	0.0010302	-0.48383	-0.00029165	1.2253	0.00073859	602.7926520775156	79.444	0.61632	81.161	80.89	81.506	1.7167					34	19	3	0	0	0	0.16939	1	33312	33312		36.506	0.462	1	1016800			30320	1638	15031	15091	34882	34882					-0.022348546654257007
RYFDPANGKF	10	Unmodified	_RYFDPANGKF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF;chr19:3982052-3982409|96|145.54|0.52|8.13|-|1|EEF2,None|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8016845583916	2	607.80128	1213.58801	0.92687	0.00056335	-0.6861	-0.00041701	0.24077	0.00014634	607.8009437832433	28.683	0.39894	29.965	29.732	30.131	1.2825					31	12	3	0	0	0	0.06111	2	12008	12008;12059		74.2	45.118	1	6112900			30321	3983	15032	15092	34883;34884	34883					-0.010243537794849544
RYFDPANGKF	10	Unmodified	_RYFDPANGKF_					0	0	0		ENSG00000167658|ENST00000309311|EEF2;ENST00000598182.5_1_19:3980752-3982305:-|nuORF;chr19:3982052-3982409|96|145.54|0.52|8.13|-|1|EEF2,None|1	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8019897341728	2	607.80128	1213.58801	0.73159	0.00044466	-0.07834	-4.7615E-05	0.65325	0.00039705	607.8013110872316	28.134	0.45857	29.91	29.634	30.092	1.7754					41	14	4	0	0	0	0.059954	3	11749	11704;11749;11804		93.938	57.811	1	4525200			30322	3983	15032	15092	34885;34886;34887	34886					-0.010243537794849544
RYFDVGLHNF	10	Unmodified	_RYFDVGLHNF_					0	0	0		nc|ENSG00000054392|Q5VTY9-6|HHAT;nc|ENSG00000054392|Q5VTY9-5|HHAT;nc|ENSG00000054392|Q5VTY9-2|HHAT;ENSG00000054392|ENST00000261458|HHAT;nc|ENSG00000054392|Q5VTY9-7|HHAT;nc|ENSG00000054392|Q5VTY9-3|HHAT	nc|ENSG00000054392|Q5VTY9-6|HHAT	nc|ENSG00000054392|Q5VTY9-6|HHAT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3146850466728	2	634.314554	1266.61456	2.0926	0.0013274	-0.86845	-0.00055087	1.2242	0.00077652	634.3138872346987	45.149	0.38916	46.514	46.369	46.758	1.3653					27	11	3	0	0	0	0.13797	2	18912	18912;18954		57.249	34.513	1	3356500			30323	713	15033	15093	34888;34889	34888					-0.00808664888131716
RYFDVGLHNF	10	Unmodified	_RYFDVGLHNF_					0	0	0		nc|ENSG00000054392|Q5VTY9-6|HHAT;nc|ENSG00000054392|Q5VTY9-5|HHAT;nc|ENSG00000054392|Q5VTY9-2|HHAT;ENSG00000054392|ENST00000261458|HHAT;nc|ENSG00000054392|Q5VTY9-7|HHAT;nc|ENSG00000054392|Q5VTY9-3|HHAT	nc|ENSG00000054392|Q5VTY9-6|HHAT	nc|ENSG00000054392|Q5VTY9-6|HHAT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3135864138603	2	634.314554	1266.61456	1.6004	0.0010152	-1.0971	-0.00069592	0.50332	0.00031926	634.3137140106796	44.569	0.35316	46.529	46.382	46.735	1.9596					27	10	3	0	0	0	0.24073	2	18666	18666;18711		43.982	21.502	1	2187500			30324	713	15033	15093	34890;34891	34890					-0.00808664888131716
RYFENPQVI	9	Unmodified	_RYFENPQVI_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant;TRRAP|p.V815Afs*78|1|0.09|ENSG00000196367|chr7:98917500-98917501|-/CCTCCTCTATCCTCCTCATCCT|frameshift_variant;TRRAP|p.F1061Yfs*20|1|0.05|ENSG00000196367|chr7:98929994-98929995|-/A|frameshift_variant;TRRAP|p.G1086Afs*42|1|0.04|ENSG00000196367|chr7:98930067-98930068|-/GGCCACTTGTATTTGTTCACTTTTATTTCCGATCC|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3047363162041	2	583.303655	1164.59276	0.16281	9.4968E-05	2.0014	0.0011674	2.1642	0.0012624	583.3049367091468	36.39	0.2556	37.666	37.54	37.796	1.2762					26	14	2	0	0	0	0.3091	2	15298	15259;15298		24.991	13.351	1	1828300			30325	4935	15034	15094	34892;34893	34893					0.017045303632812647
RYFENPQVI	9	Unmodified	_RYFENPQVI_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant;TRRAP|p.V815Afs*78|1|0.09|ENSG00000196367|chr7:98917500-98917501|-/CCTCCTCTATCCTCCTCATCCT|frameshift_variant;TRRAP|p.F1061Yfs*20|1|0.05|ENSG00000196367|chr7:98929994-98929995|-/A|frameshift_variant;TRRAP|p.G1086Afs*42|1|0.04|ENSG00000196367|chr7:98930067-98930068|-/GGCCACTTGTATTTGTTCACTTTTATTTCCGATCC|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3051635622978	2	583.303655	1164.59276	0.70708	0.00041244	0.42317	0.00024684	1.1302	0.00065928	583.3036157894214	35.819	0.23377	37.637	37.511	37.745	1.8176					25	16	2	0	0	0	0.40005	1	15042	15042		20.415	8.1739	1	2703500			30326	4935	15034	15094	34894	34894					0.017045303632812647
RYFILPYVI	9	Unmodified	_RYFILPYVI_					0	0	0		ENSG00000175548|ENST00000308742|ALG10B;ENSG00000139133|ENST00000266483|ALG10	ENSG00000175548|ENST00000308742|ALG10B	ENSG00000175548|ENST00000308742|ALG10B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3499023318291	2	592.347335	1182.68012	2.593	0.001536	0.46413	0.00027493	3.0571	0.0018109	592.3474409792929	80.903	0.37276	82.599	82.425	82.798	1.6959					30	11	3	0	0	0	0.22861	2	33987	33934;33987		32.305	9.1571	1	1999000			30327	2865	15035	15095	34895;34896	34896					0.0960835630485235
RYFLPPYTF	9	Unmodified	_RYFLPPYTF_					0	0	0		ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	ENSG00000023608|ENST00000216294|SNAPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.3152953982353	2	602.313492	1202.61243	1.5561	0.00093727	2.222	0.0013384	3.7782	0.0022756	602.3131400354115	66.66	1.7	68.549	67.808	69.508	1.8889					95	54	3	0	0	0	0.073578	1	27800	27800		58.679	39.422	1	2088700			30328	619	15036	15096	34897	34897					0.01922906374034028
RYFRFYGRIVD	11	Unmodified	_RYFRFYGRIVD_					0	0	0		nc|ENSG00000072756|Q96Q11-2|TRNT1;ENSG00000072756|ENST00000251607|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2703124880791	3	497.933366	1490.77827	-0.077568	-3.8624E-05	4.0957	0.0020394	4.0181	0.0020007	497.93504109629936	13.575	0.12477	14.302	14.224	14.349	0.72639					8	3	3	0	0	0	1.0131	1	5636	5636		2.6312	0.54727	1	956740			30329	888	15037	15097	34898	34898					0.052509328827227364
RYFRFYGRIVD	11	Unmodified	_RYFRFYGRIVD_					0	0	0		nc|ENSG00000072756|Q96Q11-2|TRNT1;ENSG00000072756|ENST00000251607|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.9350463747978	3	497.933366	1490.77827	0.035372	1.7613E-05	4.4432	0.0022124	4.4785	0.00223	497.9349762302702	13.403	0.15214	14.231	14.138	14.29	0.82789					11	4	3	0	0	0	1.0131	1	5555	5555		2.6312	1.3016	1	706550			30330	888	15037	15097	34899	34899					0.052509328827227364
RYFRFYGRIVD	11	Unmodified	_RYFRFYGRIVD_					0	0	0		nc|ENSG00000072756|Q96Q11-2|TRNT1;ENSG00000072756|ENST00000251607|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	497.933366	1490.77827	0.33127	0.00016495	4.6913	0.002336	5.0226	0.0025009	497.9352039347917	14.065	0.12128	14.065	13.978	14.1	0	-0.095182	0.00047101	NaN	2.6312	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	231880			30331	888	15037	15097							0.052509328827227364
RYFRFYGRIVD	11	Unmodified	_RYFRFYGRIVD_					0	0	0		nc|ENSG00000072756|Q96Q11-2|TRNT1;ENSG00000072756|ENST00000251607|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	nc|ENSG00000072756|Q96Q11-2|TRNT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	497.933366	1490.77827	0.87519	0.00043579	4.1037	0.0020433	4.9788	0.0024791	497.9350492616901	13.945	0.093405	14.045	13.998	14.091	0.09944	-0.1161	-0.00040688	NaN	2.6312	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	250510			30332	888	15037	15097							0.052509328827227364
RYFVSNIYL	9	Unmodified	_RYFVSNIYL_					0	0	0		ENST00000577043.1_1_16:2867692-2871170:+|nuORF;nc|ENSG00000007038|Q9Y6M0-3|PRSS21;nc|ENSG00000007038|Q9Y6M0-2|PRSS21;ENSG00000007038|ENST00000005995|PRSS21	ENST00000577043.1_1_16:2867692-2871170:+|nuORF	ENST00000577043.1_1_16:2867692-2871170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8165161013603	2	587.816399	1173.61824	1.0712	0.00062964	-1.1223	-0.00065969	-0.051115	-3.0046E-05	587.8160483646794	56.429	0.49295	57.843	57.69	58.183	1.4145					28	15	2	0	0	0	0.37774	1	23660	23660		21.537	6.6987	1	1697200			30333	515	15038	15098	34900	34900					0.03838004885733426
RYFVSNIYL	9	Unmodified	_RYFVSNIYL_					0	0	0		ENST00000577043.1_1_16:2867692-2871170:+|nuORF;nc|ENSG00000007038|Q9Y6M0-3|PRSS21;nc|ENSG00000007038|Q9Y6M0-2|PRSS21;ENSG00000007038|ENST00000005995|PRSS21	ENST00000577043.1_1_16:2867692-2871170:+|nuORF	ENST00000577043.1_1_16:2867692-2871170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8165161013603	2	587.816399	1173.61824	1.0106	0.00059404	-1.2798	-0.00075227	-0.26918	-0.00015823	587.8162482611547	55.87	0.45847	57.838	57.69	58.149	1.9684					25	14	2	0	0	0	0.20244	1	23433	23433		32.786	12.332	1	1683200			30334	515	15038	15098	34901	34901					0.03838004885733426
RYGNTPFLF	9	Unmodified	_RYGNTPFLF_					0	0	0		ENSG00000188419|ENST00000357749|CHM	ENSG00000188419|ENST00000357749|CHM	ENSG00000188419|ENST00000357749|CHM	MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7916747927666	2	557.787641	1113.56073	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.332	1	58.301	57.801	58.801	1.9684								0	0	0	0.06286	1	23625	23625		41.84	11.615	1				30335	4862	15039	15099	34902	34902					0.008491626801287566
RYGPVFTV	8	Unmodified	_RYGPVFTV_					0	0	0		ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.7593566775322	2	469.758352	937.502152	2.5016	0.0011752	-0.34111	-0.00016024	2.1605	0.0010149	469.75795986237307	40.39	0.36699	41.7	41.514	41.881	1.3102					21	11	2	0	0	0	0.35495	2	16951	16905;16951		64.236	19.829	1	2555000			30336	896	15040	15100	34903;34904	34904					0.030901061056624712
RYGPVFTV	8	Unmodified	_RYGPVFTV_					0	0	0		ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	ENSG00000073067|ENST00000308919|CYP2W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.7592956423759	2	469.758352	937.502152	2.2045	0.0010356	0.8629	0.00040536	3.0674	0.0014409	469.7585876586849	39.928	0.40424	41.79	41.615	42.019	1.8624					30	12	3	0	0	0	0.5808	2	16769	16721;16769		42.095	1.646	1	2731700			30337	896	15040	15100	34905;34906	34906					0.030901061056624712
RYHGWGHMF	9	Unmodified	_RYHGWGHMF_					0	0	0		ENST00000269919.10_1_19:18474701-18474752:+|nuORF	ENST00000269919.10_1_19:18474701-18474752:+|nuORF	ENST00000269919.10_1_19:18474701-18474752:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.7684203982353	2	595.76926	1189.52397	1.9559	0.0011652	-2.684	-0.0015991	-0.72816	-0.00043382	595.7677359787264	41.407	0.48482	43.3	43.024	43.508	1.8927					42	15	3	0	0	0	0.34572	1	17341	17341		23.148	1.6114	1	5332300			30338	5672	15041	15101	34907	34907					-0.06321412417423744
RYIFAKNLF	9	Unmodified	_RYIFAKNLF_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3380615115166	2	586.334759	1170.65496	2.325	0.0013632	1.9269	0.0011298	4.2519	0.002493	586.336628289132	47.333	0.48187	48.715	48.473	48.954	1.3825					37	14	4	0	0	0	0.042029	2	19810	19810;19864		74.423	36.449	1	4968600			30339	1891	15042	15102	34908;34909	34908					0.07646301502268216
RYIFAKNLF	9	Unmodified	_RYIFAKNLF_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2843200564384	3	391.225598	1170.65496	1.7141	0.00067061	0.4713	0.00018438	2.1854	0.00085499	391.2261531113995	47.297	1.2992	48.68	48.122	49.421	1.3825					67	40	4	0	0	0	0.11901	1	19771	19771		1.0715	0	1	4000600			30340	1891	15042	15102	34910	34910					0.07646301502268216
RYIFAKNLF	9	Unmodified	_RYIFAKNLF_					0	0	0		nc|ENSG00000114956|Q16854-3|DGUOK;nc|ENSG00000114956|Q16854-5|DGUOK;ENSG00000114956|ENST00000264093|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	nc|ENSG00000114956|Q16854-3|DGUOK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3378173708916	2	586.334759	1170.65496	2.0557	0.0012053	2.193	0.0012858	4.2487	0.0024912	586.3367471933501	46.836	0.37421	48.812	48.592	48.966	1.976					28	11	3	0	0	0	0.029093	2	19628	19628;19677		88.904	31.432	1	2745900			30341	1891	15042	15102	34911;34912	34911					0.07646301502268216
RYINNPLLI	9	Unmodified	_RYINNPLLI_					0	0	0		ENST00000555422.5_1_14:76165571-76198516:+|nuORF;nc|ENSG00000119685|Q6EMB2-3|TTLL5;TTLL5-IFT43|6|fusion;TTLL5-IFT43|5|fusion;TTLL5-IFT43|4|fusion;TTLL5-IFT43|3|fusion;ENSG00000119685|ENST00000298832|TTLL5;TTLL5-IFT43|2|fusion;TTLL5-IFT43|1|fusion	ENST00000555422.5_1_14:76165571-76198516:+|nuORF	ENST00000555422.5_1_14:76165571-76198516:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3328735232353	2	558.332216	1114.64988	0.90875	0.00050739	-0.40103	-0.00022391	0.50773	0.00028348	558.3321644171514	52.705	0.34553	54.101	53.898	54.244	1.3966					21	10	3	0	0	0	0.15635	2	22083	22034;22083		37.974	5.6685	1	4982600			30342	2080	15043	15103	34913;34914	34914					0.0971399763966474
RYINNPLLI	9	Unmodified	_RYINNPLLI_					0	0	0		ENST00000555422.5_1_14:76165571-76198516:+|nuORF;nc|ENSG00000119685|Q6EMB2-3|TTLL5;TTLL5-IFT43|6|fusion;TTLL5-IFT43|5|fusion;TTLL5-IFT43|4|fusion;TTLL5-IFT43|3|fusion;ENSG00000119685|ENST00000298832|TTLL5;TTLL5-IFT43|2|fusion;TTLL5-IFT43|1|fusion	ENST00000555422.5_1_14:76165571-76198516:+|nuORF	ENST00000555422.5_1_14:76165571-76198516:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3331176638603	2	558.332216	1114.64988	1.3774	0.00076903	-0.10218	-5.7049E-05	1.2752	0.00071198	558.3321442553336	52.11	0.33634	54.082	53.892	54.228	1.9722					18	10	2	0	0	0	0.20671	1	21847	21847		32.305	5.4218	1	4287000			30343	2080	15043	15103	34915	34915					0.0971399763966474
RYIPTAAAF	9	Unmodified	_RYIPTAAAF_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2771179080009	2	505.276909	1008.53927	0.4764	0.00024071	0.0058233	2.9424E-06	0.48222	0.00024365	505.27684323289947	36.206	0.44147	37.482	37.226	37.667	1.2762					67	25	4	0	0	0	0.031377	4	15202	15119;15165;15202;15245		85.272	26.446	1	18297000			30344	733;793	15044	15104	34916;34917;34918;34919	34918					0.035337776513983954
RYIPTAAAF	9	Unmodified	_RYIPTAAAF_					0	0	0		nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000065665|ENST00000298428|SEC61A2;ENST00000498837.1_1_3:127786720-127788502:+|nuORF;ENSG00000058262|ENST00000243253|SEC61A1;nc|ENSG00000058262|P61619-3|SEC61A1	nc|ENSG00000065665|Q9H9S3-3|SEC61A2;ENSG00000058262|ENST00000243253|SEC61A1	ENSG00000058262|ENST00000243253|SEC61A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2767211794853	2	505.276909	1008.53927	0.71836	0.00036297	-0.4419	-0.00022328	0.27646	0.00013969	505.27658421001433	35.661	0.34965	37.479	37.301	37.651	1.8176					55	24	3	0	0	0	0.086433	3	14948	14910;14948;14985		53.833	22.963	1	19362000			30345	733;793	15044	15104	34920;34921;34922	34921					0.035337776513983954
RYIRKLMI	8	Unmodified	_RYIRKLMI_					0	0	0			REV__ENST00000483350.1_1_3:50036895-50096022:+|nuORF	REV__ENST00000483350.1_1_3:50036895-50096022:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8413574099541	2	546.839154	1091.66375	2.5662	0.0014033	1.352	0.00073931	3.9181	0.0021426	546.8398729290499	86.077	0.69292	86.33	86.006	86.699	0.25227					81	22	5	0	0	0	0.89176	1	35944	35944		0.79363	0	1	143730000	+		30346	8487	15045	15105	34923	34923					0.12158951867104406
RYISQPPLL	9	Unmodified	_RYISQPPLL_					0	0	0		nc|ENSG00000116406|Q9BZQ6-2|EDEM3;ENSG00000116406|ENST00000318130|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8234741091728	2	543.818941	1085.62333	1.9005	0.0010335	2.0901	0.0011366	3.9906	0.0021702	543.8207675379975	42.12	0.28027	43.46	43.29	43.571	1.3399					14	8	2	0	0	0	0.22154	1	17646	17646		30.637	10.183	1	877110			30347	1967	15046	15106	34924	34924					0.08394308748324875
RYISQPPLL	9	Unmodified	_RYISQPPLL_					0	0	0		nc|ENSG00000116406|Q9BZQ6-2|EDEM3;ENSG00000116406|ENST00000318130|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	nc|ENSG00000116406|Q9BZQ6-2|EDEM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8212158083916	2	543.818941	1085.62333	1.8542	0.0010084	1.8252	0.00099257	3.6794	0.0020009	543.8206523242548	41.578	0.24895	43.471	43.356	43.605	1.8927					12	7	2	0	0	0	0.23535	1	17423	17423		29.082	8.667	1	964870			30348	1967	15046	15106	34925	34925					0.08394308748324875
RYKKCRWLHFI	11	Unmodified	_RYKKCRWLHFI_					0	0	0			REV__nc|ENSG00000128641|O43795-2|MYO1B	REV__nc|ENSG00000128641|O43795-2|MYO1B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.7325317263603	3	517.290607	1548.84999	4.6195	0.0023896	3.1201	0.001614	7.7395	0.0040036	517.6258373003628	87.21	1.6807	88.302	87.659	89.339	1.0918					112	55	3	0	0	0	0.14606	1	36835	36835		0.45452	0.35968	1	1206200	+		30349	9736	15047	15107	34926	34926					0.09752149035602997
RYKKKLLCRIK	11	Unmodified	_RYKKKLLCRIK_					0	0	0			REV__ENST00000367450.7_1_1:192992066-192992111:-|nuORF	REV__ENST00000367450.7_1_1:192992066-192992111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9862548708916	4	362.986612	1447.91734	-1.0768	-0.00039088	0.30737	0.00011157	-0.76948	-0.00027931	362.9867618023066	36.01	0.74994	36.01	35.462	36.212	0					283	63	5	0	0	0	1.0402	1	15118	15118		0.08335	0.08335	1	455320000	+		30350	12626	15048	15108	34927	34927					0.21130179246574698
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8444702029228	2	575.843813	1149.67307	1.5956	0.00091882	-0.40233	-0.00023168	1.1933	0.00068714	575.8432886943534	72.692	1.924	72.692	71.509	73.433	0					120	60	3	0	0	0	0.84195	4	30098	30098;30147;30246;30419		1.6526	1.0511	1	2170400	+		30351	14290	15049	15109	34928;34929;34930;34931	34928					0.10422436476983421
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8442870974541	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.84195	1	31430	31430		1.6526	1.0511	1	9020800	+		30352	14290	15049	15109	34932	34932					0.10422436476983421
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8445312380791	2	575.843813	1149.67307	1.8258	0.0010514	-0.22419	-0.0001291	1.6016	0.00092228	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.84195	4	30154	30154;30255;30307;30410		1.6526	0.32309	1	2554000	+		30353	14290	15049	15109	34933;34934;34935;34936	34933					0.10422436476983421
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8442870974541	2	575.843813	1149.67307	2.4428	0.0014067	-1.0723	-0.00061749	1.3705	0.00078921	575.8429155797212	74.786	2.1061	75.11	74.169	76.275	0.32463					197	66	4	0	0	0	0.84195	3	31329	31329;31541;31646		1.6526	1.6526	1	9924500	+		30354	14290	15049	15109	34937;34938;34939	34937					0.10422436476983421
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8446533083916	2	575.843813	1149.67307	2.1198	0.0012207	-0.53427	-0.00030766	1.5856	0.00091304	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.84195	1	31818	31818		1.6526	0.45928	1	3953600	+		30355	14290	15049	15109	34940	34940					0.10422436476983421
RYKKRKGSQ	9	Unmodified	_RYKKRKGSQ_					0	0	0			REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	REV__L1P3_dup682|chr3:196908842-196910335:+|1.1693758815815145|0.2885488685750818|2.02|428.0|23|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8433105349541	2	575.843813	1149.67307	2.788	0.0016055	-1.8935	-0.0010904	0.89449	0.00051509	575.8424605894417	73.577	1.4663	75.373	74.434	75.9	1.7962					102	46	3	0	0	0	0.79362	1	30888	30888		3.5965	1.2938	1	6246000	+		30356	14290	15049	15109	34941	34941					0.10422436476983421
RYKLYQEMF	9	Unmodified	_RYKLYQEMF_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;DYNC1H1|p.P2596Tfs*19|1|0.06|ENSG00000197102|chr14:102016936-102016937|-/A|frameshift_variant;DYNC1H1|p.V1545Afs*34|1|0.16|ENSG00000197102|chr14:102002628-102002628|T/-|frameshift_variant;DYNC1H1|p.E1316*|1|0.12|ENSG00000197102|chr14:102000128-102000129|-/C|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	426.5506469607353	3	426.549753	1276.62743	0.90592	0.00038642	-0.17675	-7.5394E-05	0.72917	0.00031103	426.54970383429315	37.577	0.41069	38.861	38.761	39.172	1.284					26	15	2	0	0	0	0.82654	2	15781	15781;15883		2.2828	0.3764	1	1300500			30357	433	15050	15110	34942;34943	34942					0.000180301797172433
RYKLYQEMF	9	Unmodified	_RYKLYQEMF_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;DYNC1H1|p.P2596Tfs*19|1|0.06|ENSG00000197102|chr14:102016936-102016937|-/A|frameshift_variant;DYNC1H1|p.V1545Afs*34|1|0.16|ENSG00000197102|chr14:102002628-102002628|T/-|frameshift_variant;DYNC1H1|p.E1316*|1|0.12|ENSG00000197102|chr14:102000128-102000129|-/C|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	426.5514404177666	3	426.549753	1276.62743	0.78064	0.00033298	0.010183	4.3437E-06	0.79082	0.00033733	426.54986245428165	36.913	0.46845	38.731	38.596	39.064	1.8176					39	24	2	0	0	0	0.76103	2	15476	15476;15530		4.897	2.4622	1	1946500			30358	433	15050	15110	34944;34945	34944					0.000180301797172433
RYKTKVKYWLT	11	Unmodified	_RYKTKVKYWLT_					0	0	0		tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	tr|A0A7D7A2J6|A0A7D7A2J6_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20195PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	743.4409667849541	2	743.432461	1484.85037	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.035	1	91.055	90.555	91.555	1.0199								0	0	0	0.63775	1	37940	37940		1.0715	0.76443	1				30359	17258	15051	15111	34946	34946					0.12733847236449947
RYKYFYSK	8	Unmodified	_RYKYFYSK_					0	0	0		ENST00000538155.5_1_12:27058344-27058386:-|nuORF	ENST00000538155.5_1_12:27058344-27058386:-|nuORF	ENST00000538155.5_1_12:27058344-27058386:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1536132693291	3	385.537953	1153.59203	-0.98898	-0.00038129	-2.8464	-0.0010974	-3.8353	-0.0014787	385.5369360366347	22.96	0.20971	22.96	22.837	23.047	0					11	6	2	0	0	0	2.3239	1	9587	9587		0.30703	0	1	577820			30360	7205	15052	15112	34947	34947					0.02137735714200062
RYLDEINLL	9	Unmodified	_RYLDEINLL_					0	0	0		ENSG00000060558|ENST00000262958|GNA15	ENSG00000060558|ENST00000262958|GNA15	ENSG00000060558|ENST00000262958|GNA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8210937380791	2	574.819138	1147.62372	3.1373	0.0018034	-0.65119	-0.00037432	2.4861	0.0014291	574.8181063419569	60.931	0.41597	62.35	62.089	62.505	1.4196					30	11	4	0	0	0	0.11669	2	25563	25563;25615		43.772	5.5968	1	5059800			30361	744	15053	15113	34948;34949	34948					0.055816836775193224
RYLDELMKL	9	Unmodified	_RYLDELMKL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8249389529228	2	590.823366	1179.63218	1.754	0.0010363	0.87907	0.00051938	2.6331	0.0015557	590.8241712762824	54.287	0.68355	55.691	55.438	56.121	1.4048					64	21	4	0	0	0	0.0070725	5	22737	22651;22698;22737;22776;22822		114.2	40.643	1	15617000			30362	2927	15054	15114	34950;34951;34952;34953;34954	34952					0.04954914322502191
RYLDELMKL	9	Unmodified	_RYLDELMKL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8248779177666	2	590.823366	1179.63218	1.154	0.00068178	0.62909	0.00037168	1.783	0.0010535	590.8238899227528	53.766	0.75336	55.736	55.471	56.224	1.9697					65	23	4	0	0	0	0.0051619	5	22528	22445;22488;22528;22566;22613		121.35	61.977	1	16635000			30363	2927	15054	15114	34955;34956;34957;34958;34959	34957					0.04954914322502191
RYLDLFTNF	9	Unmodified	_RYLDLFTNF_					0	0	0		KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant;ENSG00000100196|ENST00000216014|KDELR3;nc|ENSG00000100196|O43731-2|KDELR3	KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant	KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8065673708916	2	594.806031	1187.59751	2.6913	0.0016008	-0.63777	-0.00037935	2.0535	0.0012215	594.8056752643066	72.387	0.48933	73.717	73.423	73.913	1.3297					47	15	4	0	0	0	0.0049178	3	30370	30321;30370;30424		122.18	72.246	1	11153000			30364	1251	15055	15115	34960;34961;34962	34961					0.011214145060421288
RYLDLFTNF	9	Unmodified	_RYLDLFTNF_					0	0	0		KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant;ENSG00000100196|ENST00000216014|KDELR3;nc|ENSG00000100196|O43731-2|KDELR3	KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant	KDELR3|p.D177Efs*11|1|0.07|ENSG00000100196|chr22:38481390-38481391|-/GAATG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8066284060478	2	594.806031	1187.59751	2.5661	0.0015263	-1.1753	-0.00069905	1.3908	0.00082728	594.8058529851836	71.934	0.521	73.758	73.445	73.966	1.8239					75	16	7	0	0	0	5.27E-05	3	30158	30113;30158;30204		149.91	93.737	1	11291000			30365	1251	15055	15115	34963;34964;34965	34964					0.011214145060421288
RYLDLFTSF	9	Unmodified	_RYLDLFTSF_					0	0	0		ENSG00000136240|ENST00000258739|KDELR2;ENST00000462052.1_1_7:6513727-6523688:-|nuORF;nc|ENSG00000136240|P33947-2|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3018676638603	2	581.300581	1160.58661	3.3904	0.0019708	-1.7103	-0.00099418	1.6801	0.00097666	581.2996363956777	74.008	0.65057	75.326	75.03	75.681	1.318					64	20	5	0	0	0	0.015029	4	31070	30989;31031;31070;31114		103.35	51.085	1	24269000			30366	2716	15056	15116	34966;34967;34968;34969	34968					0.012740121317619924
RYLDLFTSF	9	Unmodified	_RYLDLFTSF_					0	0	0		ENSG00000136240|ENST00000258739|KDELR2;ENST00000462052.1_1_7:6513727-6523688:-|nuORF;nc|ENSG00000136240|P33947-2|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	ENSG00000136240|ENST00000258739|KDELR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3013793826103	2	581.300581	1160.58661	2.678	0.0015567	-1.0149	-0.00058995	1.6631	0.00096675	581.2999742262713	73.447	0.68103	75.243	75.006	75.687	1.7962					56	21	4	0	0	0	0.026734	4	30848	30758;30809;30848;30886		92.653	40.385	1	26576000			30367	2716	15056	15116	34970;34971;34972;34973	34972					0.012740121317619924
RYLDVSILGKF	11	Unmodified	_RYLDVSILGKF_					0	0	0		ENSG00000165819|ENST00000298717|METTL3;nc|ENSG00000165819|Q86U44-2|METTL3;ENST00000537163.5_1_14:21967572-21971372:-|nuORF	ENSG00000165819|ENST00000298717|METTL3	ENSG00000165819|ENST00000298717|METTL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.5884887576103	3	437.587084	1309.73942	3.1831	0.0013929	-0.21211	-9.2817E-05	2.971	0.0013001	437.5870975835463	61.484	0.43184	62.902	62.744	63.176	1.4177					34	13	3	0	0	0	0.2393	2	25787	25787;25841		36.955	24.727	1	3246800			30368	3862	15057	15117	34974;34975	34974					0.09694207528355037
RYLDVSILGKF	11	Unmodified	_RYLDVSILGKF_					0	0	0		ENSG00000165819|ENST00000298717|METTL3;nc|ENSG00000165819|Q86U44-2|METTL3;ENST00000537163.5_1_14:21967572-21971372:-|nuORF	ENSG00000165819|ENST00000298717|METTL3	ENSG00000165819|ENST00000298717|METTL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.5883361697197	3	437.587084	1309.73942	2.8092	0.0012293	-0.26197	-0.00011464	2.5473	0.0011146	437.58686399528295	60.975	0.42736	62.94	62.729	63.157	1.9653					35	13	4	0	0	0	0.38674	2	25597	25553;25597		27.289	20.111	1	2853500			30369	3862	15057	15117	34976;34977	34977					0.09694207528355037
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2483093142509	3	412.248403	1233.72338	1.4261	0.0005879	-1.5131	-0.00062379	-0.087066	-3.5893E-05	412.2472638148318	46.037	0.50301	47.412	47.146	47.649	1.3751					48	15	4	0	0	0	0.053368	3	19287	19249;19287;19329		66.683	32.461	1	11093000			30370	2403	15058	15118	34978;34979;34980	34979					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2485534548759	3	412.248403	1233.72338	1.7455	0.0007196	-1.4409	-0.000594	0.30466	0.0001256	412.2474383145748	46.661	2.788	48.036	47.617	50.405	1.3751					231	88	3	0	0	0	0.0078461	16	19558	19418;19470;19521;19558;19597;19691;19757;19812;19862;19927;19994;20042;20109;20162;20209;20255		111.31	38.316	1	9417700			30371	2403	15058	15118	34981;34982;34983;34984;34985;34986;34987;34988;34989;34990;34991;34992;34993;34994;34995;34996	34984					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2485534548759	3	412.248403	1233.72338	1.46	0.00060186	-2.2924	-0.00094506	-0.83249	-0.00034319	412.24711444880796	45.499	0.57059	47.458	47.146	47.716	1.9596					53	17	4	0	0	0	0.027018	2	19022	19022;19060		92.201	36.966	1	8487300			30372	2403	15058	15118	34997;34998	34997					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2487975955009	3	412.248403	1233.72338	1.5447	0.00063681	-1.9812	-0.00081674	-0.43648	-0.00017994	412.24714637183644	46.2	2.4725	48.17	47.695	50.168	1.9703					179	79	4	0	0	0	0.0078461	5	19348	19258;19305;19348;19398;19436		111.31	39.601	1	6928400			30373	2403	15058	15118	34999;35000;35001;35002;35003	35001					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2476989626884	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.022	1	48.998	48.498	49.498	1.976								0	0	0	0.079426	1	19694	19694		38.559	20.696	1				30374	2403	15058	15118	35004	35004					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2470886111259	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.162	1	49.138	48.638	49.638	1.976								0	0	0	0.049973	1	19752	19752		44.392	19.51	1				30375	2403	15058	15118	35005	35005					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2494079470634	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.274	1	49.25	48.75	49.75	1.976								0	0	0	0.083403	1	19798	19798		37.771	18.145	1				30376	2403	15058	15118	35006	35006					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2484008669853	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.396	1	49.372	48.872	49.872	1.976								0	0	0	0.12487	1	19850	19850		31.636	12.492	1				30377	2403	15058	15118	35007	35007					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2476684451103	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.58	1	49.556	49.056	50.056	1.976								0	0	0	0.083403	1	19928	19928		37.771	18.145	1				30378	2403	15058	15118	35008	35008					0.11586546082116911
RYLDWIKKI	9	Unmodified	_RYLDWIKKI_					0	0	0		nc|ENSG00000129455|O60259-3|KLK8;ENSG00000129455|ENST00000695909|KLK8;nc|ENSG00000129455|O60259-2|KLK8	nc|ENSG00000129455|O60259-3|KLK8	nc|ENSG00000129455|O60259-3|KLK8	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2485229372978	3	412.248403	1233.72338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.714	1	49.69	49.19	50.19	1.976								0	0	0	0.25949	1	19983	19983		21.799	10.901	1				30379	2403	15058	15118	35009	35009					0.11586546082116911
RYLEAALRL	9	Unmodified	_RYLEAALRL_					0	0	0		ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8300659060478	2	552.82984	1103.64513	1.7598	0.00097288	-1.5073	-0.00083328	0.25252	0.0001396	552.8287599758371	38.775	0.45385	40.071	39.836	40.29	1.2961					25	14	2	0	0	0	0.17733	2	16281	16229;16281		35.612	15.198	1	3628100			30380	2973	15059	15119	35010;35011	35011					0.09745113496887825
RYLEAALRL	9	Unmodified	_RYLEAALRL_					0	0	0		ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	ENSG00000141696|ENST00000393928|P3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8304931521416	2	552.82984	1103.64513	0.86827	0.00048	-0.7736	-0.00042767	0.094673	5.2338E-05	552.828956351035	38.115	0.6201	39.935	39.73	40.35	1.8202					34	19	3	0	0	0	0.39674	2	15990	15946;15990		20.581	6.6749	1	2382100			30381	2973	15059	15119	35012;35013	35013					0.09745113496887825
RYLELISSI	9	Unmodified	_RYLELISSI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3165771365166	2	547.316232	1092.61791	2.067	0.0011313	-0.58003	-0.00031746	1.4869	0.00081382	547.3161850293424	58.711	0.38686	60.68	60.457	60.844	1.969					21	12	2	0	0	0	0.040497	1	24600	24600		75.761	3.8386	1	2674200			30382	3732	15060	15120	35014	35014					0.07530585165864068
RYLELISSI	9	Unmodified	_RYLELISSI_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	547.316232	1092.61791	2.1842	0.0011955	-0.21139	-0.0001157	1.9729	0.0010798	547.3163649273978	59.213	0.45342	60.633	60.409	60.862	1.4196	-0.02358	0.00020558	NaN	75.761	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2386300			30383	3732	15060	15120							0.07530585165864068
RYLEQLHQL	9	Unmodified	_RYLEQLHQL_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3311645388603	2	600.330205	1198.64586	0.78461	0.00047103	0.69265	0.00041582	1.4773	0.00088685	600.3308078399104	28.006	0.27405	29.782	29.665	29.939	1.7754					12	8	2	0	0	0	0.62937	1	11740	11740		10.151	0.76745	1	655950			30384	4044	15061	15121	35015	35015					0.05447908145947622
RYLEQLHQL	9	Unmodified	_RYLEQLHQL_					0	0	0		nc|ENSG00000168610|P40763-3|STAT3;nc|ENSG00000168610|P40763-2|STAT3;ENSG00000168610|ENST00000264657|STAT3	nc|ENSG00000168610|P40763-3|STAT3	nc|ENSG00000168610|P40763-3|STAT3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	600.330205	1198.64586	1.0153	0.00060953	0.79155	0.00047519	1.8069	0.0010847	600.3310061948413	28.654	0.24472	29.936	29.794	30.039	1.2825	0.077305	6.1835E-05	NaN	10.151	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	643810			30385	4044	15061	15121							0.05447908145947622
RYLIMYMKI	9	Unmodified	_RYLIMYMKI_					0	0	0		Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|16|3|sense	Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|16|3|sense	Tigger4_dup110|chr1:206077707-206078236:+|1.8187903530330864|0.069581210185122|4.71|424.0|16|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	410.5612975955009	3	410.896095	1229.66646	2.3841	0.0009796	-2.8076	-0.0011536	-0.42355	-0.00017403	410.8947854906111	44.716	0.43825	46.081	45.867	46.305	1.3653					30	13	3	0	0	0	0.11619	1	18705	18705		10.8	2.3552	1	5494100			30386	16025	15062	15122	35016	35016					0.060810392097437216
RYLMDPDTFTF	11	Unmodified	_RYLMDPDTFTF_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	703.3263427615166	2	703.32647	1404.63839	1.5095	0.0010617	0.78107	0.00054935	2.2906	0.001611	703.8282105880442	67.735	0.35723	69.113	68.946	69.303	1.3778					31	11	3	0	0	0	0.21817	1	28428	28428		38.615	26.374	1	1763600			30387	4524	15063	15123	35017	35017					-0.04774612236678877
RYLMDPDTFTF	11	Unmodified	_RYLMDPDTFTF_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	nc|ENSG00000179750|Q9UH17-3|APOBEC3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	703.3286010622978	2	703.32647	1404.63839	0.50026	0.00035184	1.297	0.00091225	1.7973	0.0012641	703.3266035453612	67.181	0.30249	69.07	68.955	69.257	1.8889					21	9	3	0	0	0	0.19131	1	28192	28192		40.725	28.484	1	1738100			30388	4524	15063	15123	35018	35018					-0.04774612236678877
RYLNEFEEL	9	Unmodified	_RYLNEFEEL_					0	0	0		nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;ENSG00000086232|ENST00000199389|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8005859255791	2	606.798403	1211.58225	1.8947	0.0011497	1.033	0.0006268	2.9277	0.0017765	606.7988512246092	46.751	0.47724	48.134	47.901	48.378	1.3825					39	14	4	0	0	0	0.031145	2	19575	19527;19575		85.642	26.963	1	5280900			30389	1072	15064	15124	35019;35020	35020					-0.015074970817977373
RYLNEFEEL	9	Unmodified	_RYLNEFEEL_					0	0	0		nc|ENSG00000086232|Q9BQI3-2|EIF2AK1;ENSG00000086232|ENST00000199389|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	nc|ENSG00000086232|Q9BQI3-2|EIF2AK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.8016235232353	2	606.798403	1211.58225	1.4962	0.00090788	1.2058	0.00073169	2.702	0.0016396	606.7994793152156	46.294	0.55914	48.264	47.882	48.441	1.9703					41	17	4	0	0	0	0.031145	2	19399	19353;19399		85.642	39.621	1	5248500			30390	1072	15064	15124	35021;35022	35022					-0.015074970817977373
RYLNELKWSF	10	Unmodified	_RYLNELKWSF_					0	0	0		ENST00000475818.5_1_3:13522761-13543460:+|nuORF;ENSG00000163517|ENST00000295757|HDAC11	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.5757934451103	3	452.575067	1354.70337	1.6986	0.00076873	0.49434	0.00022373	2.1929	0.00099246	452.5750562815287	53.931	0.57298	55.332	55.194	55.767	1.4005					32	18	2	0	0	0	0.28949	1	22584	22584		39.923	28.405	1	2634000			30391	3692	15065	15125	35023	35023					0.04020750351492097
RYLNELKWSF	10	Unmodified	_RYLNELKWSF_					0	0	0		ENST00000475818.5_1_3:13522761-13543460:+|nuORF;ENSG00000163517|ENST00000295757|HDAC11	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	ENST00000475818.5_1_3:13522761-13543460:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.5753356814384	3	452.575067	1354.70337	0.85332	0.00038619	-0.036355	-1.6453E-05	0.81697	0.00036974	452.5750470509561	53.455	0.39235	55.425	55.203	55.595	1.9697					22	12	2	0	0	0	0.50979	1	22421	22421		27.129	19.7	1	1602500			30392	3692	15065	15125	35024	35024					0.04020750351492097
RYLPDTLLL	9	Unmodified	_RYLPDTLLL_					0	0	0		ENST00000207636.9_1_22:19951681-19956256:+|nuORF;nc|ENSG00000093010|P21964-2|COMT;ENSG00000093010|ENST00000361682|COMT	ENST00000207636.9_1_22:19951681-19956256:+|nuORF	ENST00000207636.9_1_22:19951681-19956256:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3278686404228	2	552.326599	1102.63865	2.792	0.0015421	-0.34258	-0.00018922	2.4494	0.0013529	552.3264389067332	63.053	0.65028	64.466	64.195	64.845	1.4134					55	20	4	0	0	0	0.18809	4	26406	26406;26455;26494;26534		34.402	9.0024	1	29459000			30393	1172	15066	15126	35025;35026;35027;35028	35025					0.09143175545523263
RYLPDTLLL	9	Unmodified	_RYLPDTLLL_					0	0	0		ENST00000207636.9_1_22:19951681-19956256:+|nuORF;nc|ENSG00000093010|P21964-2|COMT;ENSG00000093010|ENST00000361682|COMT	ENST00000207636.9_1_22:19951681-19956256:+|nuORF	ENST00000207636.9_1_22:19951681-19956256:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3282958865166	2	552.326599	1102.63865	2.8119	0.0015531	-0.10525	-5.8135E-05	2.7067	0.001495	552.3265805825157	62.477	0.6183	64.422	64.196	64.814	1.9448					53	19	4	0	0	0	0.18809	2	26232	26182;26232		34.402	3.7041	1	36479000			30394	1172	15066	15126	35029;35030	35030					0.09143175545523263
RYLPKGFLNQF	11	Unmodified	_RYLPKGFLNQF_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.5913574099541	3	461.590828	1381.75066	1.624	0.00074962	0.39965	0.00018447	2.0236	0.00093409	461.59094513435895	48.557	1.425	49.945	49.49	50.915	1.388					138	45	4	0	0	0	0.29452	5	20434	20237;20288;20341;20391;20434		32.616	27.901	1	9385000			30395	4088	15067	15127	35031;35032;35033;35034;35035	35035					0.07505029622507209
RYLPKGFLNQF	11	Unmodified	_RYLPKGFLNQF_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	691.8845703005791	2	691.882604	1381.75066	1.008	0.00069741	1.045	0.00072302	2.053	0.0014204	691.8830972660585	48.552	0.86593	49.94	49.552	50.418	1.388					62	27	3	0	0	0	0.015274	3	20344	20284;20344;20396		114.2	89.211	1	2721100			30396	4088	15067	15127	35036;35037;35038	35037					0.07505029622507209
RYLPKGFLNQF	11	Unmodified	_RYLPKGFLNQF_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	691.8834716677666	2	691.882604	1381.75066	1.6372	0.0011328	-0.096636	-6.6861E-05	1.5406	0.0010659	691.8825797476933	48.075	0.98681	50.053	49.651	50.637	1.9772					74	31	3	0	0	0	0.035291	5	20122	20024;20072;20122;20175;20227		79.596	58.059	1	2653800			30397	4088	15067	15127	35039;35040;35041;35042;35043	35041					0.07505029622507209
RYLPKGFLNQF	11	Unmodified	_RYLPKGFLNQF_					0	0	0		nc|ENSG00000169398|Q05397-7|PTK2;nc|ENSG00000169398|Q05397|PTK2;nc|ENSG00000169398|Q05397-5|PTK2;ENSG00000169398|ENST00000696786|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	nc|ENSG00000169398|Q05397-7|PTK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.5913574099541	3	461.590828	1381.75066	2.5305	0.001168	-0.65561	-0.00030262	1.8749	0.00086541	461.59050784451	48.086	1.361	50.063	49.556	50.917	1.9772					126	43	4	0	0	0	0.27918	3	20135	20082;20135;20186		33.821	26.344	1	9006900			30398	4088	15067	15127	35044;35045;35046	35045					0.07505029622507209
RYLPSSVFL	9	Unmodified	_RYLPSSVFL_					0	0	0		ENST00000415248.1_1_19:57946919-57954712:+|nuORF	ENST00000415248.1_1_19:57946919-57954712:+|nuORF	ENST00000415248.1_1_19:57946919-57954712:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3067504763603	2	541.305667	1080.59678	1.2116	0.00065584	1.0268	0.00055582	2.2384	0.0012117	541.3061068431476	55.455	0.3216	56.865	56.616	56.937	1.4099					20	10	3	0	0	0	0.25667	1	23227	23227		27.629	0	1	3026600			30399	6399	15068	15128	35047	35047					0.059706198569983826
RYLPSSVFL	9	Unmodified	_RYLPSSVFL_					0	0	0		ENST00000415248.1_1_19:57946919-57954712:+|nuORF	ENST00000415248.1_1_19:57946919-57954712:+|nuORF	ENST00000415248.1_1_19:57946919-57954712:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.305667	1080.59678	0.75518	0.00040878	2.717	0.0014707	3.4721	0.0018795	541.307192299673	54.938	0.35397	56.906	56.722	57.076	1.9684	0.020698	0.0010949	NaN	27.629	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2797100			30400	6399	15068	15128							0.059706198569983826
RYLPTGSFPF	10	Unmodified	_RYLPTGSFPF_					0	0	0		nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8118163943291	2	592.808574	1183.60259	2.8999	0.0017191	0.39935	0.00023674	3.2992	0.0019558	592.8087727805294	60.284	0.70016	61.703	61.421	62.121	1.4196					85	22	5	0	0	0	0.086078	6	25392	25211;25259;25298;25340;25392;25436		66.457	34.151	1	29032000			30401	1471	15069	15129	35048;35049;35050;35051;35052;35053	35052					0.01813718368634909
RYLPTGSFPF	10	Unmodified	_RYLPTGSFPF_					0	0	0		nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.8101684451103	2	592.808574	1183.60259	3.0318	0.0017973	0.63265	0.00037504	3.6645	0.0021723	592.8088784555678	59.812	0.67415	61.781	61.466	62.14	1.969					78	21	5	0	0	0	0.064034	5	25140	25013;25062;25101;25140;25184		72.968	47.569	1	29650000			30402	1471	15069	15129	35054;35055;35056;35057;35058	35057					0.01813718368634909
RYLPTGSFPFL	11	Unmodified	_RYLPTGSFPFL_					0	0	0		nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.3524047732353	2	649.350606	1296.68666	3.1898	0.0020713	-0.72693	-0.00047203	2.4629	0.0015993	649.3501474800745	73.879	0.68716	75.197	74.904	75.591	1.318					69	21	4	0	0	0	0.025941	5	31019	30938;30981;31019;31059;31100		114.19	88.787	1	21798000			30403	1471	15070	15130	35059;35060;35061;35062;35063	35061					0.05018249465547342
RYLPTGSFPFL	11	Unmodified	_RYLPTGSFPFL_					0	0	0		nc|ENSG00000104723|Q13454-2|TUSC3;ENSG00000104723|ENST00000503731|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	nc|ENSG00000104723|Q13454-2|TUSC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.3516723513603	2	649.350606	1296.68666	2.6936	0.0017491	-0.60954	-0.00039581	2.084	0.0013533	649.3500809015438	73.331	0.72242	75.136	74.823	75.545	1.8052					79	22	5	0	0	0	0.025941	5	30743	30698;30743;30782;30821;30865		114.19	91.45	1	18260000			30404	1471	15070	15130	35064;35065;35066;35067;35068	35065					0.05018249465547342
RYLQTLTTI	9	Unmodified	_RYLQTLTTI_					0	0	0		ENSG00000148175|ENST00000286713|STOM;nc|ENSG00000148175|P27105-2|STOM	ENSG00000148175|ENST00000286713|STOM	ENSG00000148175|ENST00000286713|STOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.8213378787041	2	554.821681	1107.62881	2.151	0.0011934	-1.8598	-0.0010319	0.29114	0.00016153	554.8205272008638	41.47	0.32047	42.796	42.587	42.908	1.3254					17	9	2	0	0	0	0.35391	1	17386	17386		22.736	4.5899	1	902880			30405	3199	15071	15131	35069	35069					0.0792998754011478
RYLQTLTTI	9	Unmodified	_RYLQTLTTI_					0	0	0		ENSG00000148175|ENST00000286713|STOM;nc|ENSG00000148175|P27105-2|STOM	ENSG00000148175|ENST00000286713|STOM	ENSG00000148175|ENST00000286713|STOM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.8232299685478	2	554.821681	1107.62881	1.9401	0.0010764	-1.2952	-0.00071863	0.64489	0.0003578	554.8209847237559	40.998	0.35135	42.891	42.736	43.088	1.8927					15	10	2	0	0	0	0.35391	1	17190	17190		22.736	4.5899	1	781080			30406	3199	15071	15131	35070	35070					0.0792998754011478
RYLSKVLEL	9	Unmodified	_RYLSKVLEL_					0	0	0		nc|nan|Q8WUR7-2|C15orf40;ENSG00000169609|ENST00000304177|C15orf40;nc|nan|Q8WUR7-3|C15orf40;ENST00000565725.1_1_15:83677164-83680359:-|nuORF	nc|nan|Q8WUR7-2|C15orf40	nc|nan|Q8WUR7-2|C15orf40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8405639529228	2	560.839874	1119.66519	1.208	0.0006775	0.79866	0.00044792	2.0067	0.0011254	560.840226809386	38.004	0.35186	39.288	39.049	39.401	1.284					28	12	3	0	0	0	0.16939	1	15905	15905		36.506	5.8697	1	3681000			30407	4100	15072	15132	35071	35071					0.11014864436833705
RYLSKVLEL	9	Unmodified	_RYLSKVLEL_					0	0	0		nc|nan|Q8WUR7-2|C15orf40;ENSG00000169609|ENST00000304177|C15orf40;nc|nan|Q8WUR7-3|C15orf40;ENST00000565725.1_1_15:83677164-83680359:-|nuORF	nc|nan|Q8WUR7-2|C15orf40	nc|nan|Q8WUR7-2|C15orf40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2286559939384	3	374.229008	1119.66519	0.24864	9.3049E-05	-2.9501	-0.001104	-2.7015	-0.001011	374.22795640300245	37.97	0.35186	39.254	39.049	39.401	1.284					29	12	3	0	0	0	0.093059	1	15920	15920		40.725	10.021	1	3151500			30408	4100	15072	15132	35072	35072					0.11014864436833705
RYLSKVLEL	9	Unmodified	_RYLSKVLEL_					0	0	0		nc|nan|Q8WUR7-2|C15orf40;ENSG00000169609|ENST00000304177|C15orf40;nc|nan|Q8WUR7-3|C15orf40;ENST00000565725.1_1_15:83677164-83680359:-|nuORF	nc|nan|Q8WUR7-2|C15orf40	nc|nan|Q8WUR7-2|C15orf40	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	374.229008	1119.66519	0.45144	0.00016894	-2.3139	-0.00086594	-1.8625	-0.000697	374.2275911667999	37.225	0.38315	39.045	38.925	39.308	1.8202	-0.1045	0.00049303	NaN	40.725	26	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1208000			30409	4100	15072	15132							0.11014864436833705
RYLTVAAVF	9	Unmodified	_RYLTVAAVF_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant;ENSG00000104833|ENST00000264071|TUBB4A	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3011352419853	2	520.300384	1038.58622	1.595	0.00082987	0.61263	0.00031875	2.2076	0.0011486	520.3007300522208	55.139	0.65831	56.544	56.302	56.96	1.4048					72	22	4	0	0	0	0.1388	4	23064	23064;23114;23166;23211		39.95	18.203	1	68406000			30410	4854;1479	15073	15133	35073;35074;35075;35076	35073					0.06846637202556849
RYLTVAAVF	9	Unmodified	_RYLTVAAVF_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENST00000454403.1_1_13:41958968-41959286:-|nuORF;TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant;ENSG00000104833|ENST00000264071|TUBB4A	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;TUBB4A|p.M330Afs*87|1|0.08|ENSG00000104833|chr19:6495510-6495511|AT/-|frameshift_variant	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3011352419853	2	520.300384	1038.58622	1.3864	0.00072136	0.16697	8.6875E-05	1.5534	0.00080823	520.3004613375559	54.685	0.75007	56.654	56.379	57.129	1.9684					77	25	4	0	0	0	0.086433	5	22882	22836;22882;22930;22985;23054		53.833	25.346	1	68226000			30411	4854;1479	15073	15133	35077;35078;35079;35080;35081	35078					0.06846637202556849
RYLTVATVF	9	Unmodified	_RYLTVATVF_					0	0	0		nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	nc|ENSG00000258947|Q13509-2|TUBB3	nc|ENSG00000258947|Q13509-2|TUBB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.3037597537041	2	535.305667	1068.59678	0.97682	0.00052289	-2.4657	-0.0013199	-1.4888	-0.00079699	535.3039024944596	53.341	0.56604	54.742	54.506	55.072	1.4005					40	24	2	0	0	0	0.15456	3	22326	22284;22326;22364		38.176	14.155	1	9426500			30412	5412	15074	15134	35082;35083;35084	35083					0.06522619856991696
RYLTVATVF	9	Unmodified	_RYLTVATVF_					0	0	0		nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	nc|ENSG00000258947|Q13509-2|TUBB3	nc|ENSG00000258947|Q13509-2|TUBB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.3057739138603	2	535.305667	1068.59678	1.1917	0.00063791	-0.94551	-0.00050613	0.24617	0.00013178	535.3050098760328	52.745	0.38991	54.717	54.512	54.902	1.9722					36	16	3	0	0	0	0.1109	2	22112	22064;22112		45.7	15.063	1	8823600			30413	5412	15074	15134	35085;35086	35086					0.06522619856991696
RYLVEVEEL	9	Unmodified	_RYLVEVEEL_					0	0	0		ENSG00000088356|ENST00000202017|PDRG1	ENSG00000088356|ENST00000202017|PDRG1	ENSG00000088356|ENST00000202017|PDRG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3114501833916	2	575.311146	1148.60774	1.9882	0.0011438	-3.308	-0.0019032	-1.3199	-0.00075935	575.3086892590164	48.593	0.33883	50.57	50.422	50.761	1.9772					23	10	3	0	0	0	0.21592	1	20375	20375		31.268	12.011	1	2173600			30414	1100	15075	15135	35087	35087					0.03937977440614304
RYLVEVEEL	9	Unmodified	_RYLVEVEEL_					0	0	0		ENSG00000088356|ENST00000202017|PDRG1	ENSG00000088356|ENST00000202017|PDRG1	ENSG00000088356|ENST00000202017|PDRG1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	575.311146	1148.60774	1.634	0.00094009	-0.040622	-2.337E-05	1.5934	0.00091672	575.3107241580731	49.161	0.28263	50.552	50.36	50.643	1.3911	-0.0091022	0.0019539	NaN	31.268	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2372800			30415	1100	15075	15135							0.03937977440614304
RYLVTLYGF	9	Unmodified	_RYLVTLYGF_					0	0	0		nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB;TNXB|p.G3000Vfs*44|1|0.13|ENSG00000168477|chr6:32052786-32052787|-/A|frameshift_variant	nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3155395388603	2	566.313492	1130.61243	2.3185	0.001313	1.7263	0.0009776	4.0448	0.0022906	566.3143366253452	65.874	0.30534	67.273	67.034	67.34	1.3989					23	9	3	0	0	0	0.20244	2	27594	27594;27643		32.786	16.939	1	2788700			30416	4036	15076	15136	35088;35089	35088					0.05234906374039383
RYLVTLYGF	9	Unmodified	_RYLVTLYGF_					0	0	0		nc|ENSG00000168477|P22105-1|TNXB;ENSG00000168477|ENST00000644971|TNXB;nc|ENSG00000168477|P22105-4|TNXB;TNXB|p.G3000Vfs*44|1|0.13|ENSG00000168477|chr6:32052786-32052787|-/A|frameshift_variant	nc|ENSG00000168477|P22105-1|TNXB	nc|ENSG00000168477|P22105-1|TNXB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3163329958916	2	566.313492	1130.61243	1.8146	0.0010276	1.8749	0.0010618	3.6895	0.0020894	566.3145040474309	65.363	0.28108	67.271	67.095	67.376	1.9085					21	8	3	0	0	0	0.10473	2	27386	27386;27434		47.749	22.349	1	2624900			30417	4036	15076	15136	35090;35091	35090					0.05234906374039383
RYMDQWVPVI	10	Unmodified	_RYMDQWVPVI_					0	0	0		nc|ENSG00000116717|P24522-2|GADD45A;ENSG00000116717|ENST00000370986|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.3199340701103	2	653.834265	1305.65398	1.7075	0.0011164	-4.2962	-0.002809	-2.5887	-0.0016926	653.8341689118151	66.22	0.3781	68.109	67.931	68.309	1.8889					19	11	3	0	0	0	0.65659	1	27773	27773		20.415	5.5763	1	1487100			30418	1983	15077	15137	35092	35092					0.013377190710343712
RYMDQWVPVI	10	Unmodified	_RYMDQWVPVI_					0	0	0		nc|ENSG00000116717|P24522-2|GADD45A;ENSG00000116717|ENST00000370986|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	nc|ENSG00000116717|P24522-2|GADD45A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	653.834265	1305.65398	1.5964	0.0010438	-3.4991	-0.0022878	-1.9027	-0.001244	653.8344277179883	66.658	0.31229	68.047	67.934	68.246	1.3887	-0.031138	0.00038349	NaN	20.415	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225300			30419	1983	15077	15137							0.013377190710343712
RYMPFAPAI	9	Unmodified	_RYMPFAPAI_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1920043826103	2	533.281137	1064.54772	1.3788	0.00073528	-0.01704	-9.0873E-06	1.3617	0.00072619	533.2802093227117	52.529	0.19314	54.501	54.416	54.61	1.9722					9	5	2	0	0	0	0.11645	1	22018	22018		4.756	0	1	625120			30420	4605	15078	15138	35093	35093					0.018030082963832683
RYMPFAPAI	9	Unmodified	_RYMPFAPAI_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	533.281137	1064.54772	0.75559	0.00040294	1.2189	0.00065	1.9745	0.0010529	533.2803351256971	53.122	0.22314	54.522	54.379	54.602	1.4005	0.010294	0.00082352	NaN	4.756	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	711950			30421	4605	15078	15138							0.018030082963832683
RYMWINQEL	9	Oxidation (M)	_RYM(Oxidation (M))WINQEL_		RYM(1)WINQEL		RYM(50)WINQEL	0	0	1		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.8097411990166	2	634.808248	1267.60194	2.0184	0.0012813	-2.8608	-0.0018161	-0.84247	-0.0005348	634.8076296841269	44.293	0.38425	45.658	45.419	45.803	1.365					27	11	3	0	0	0	0.099302	1	18554	18554		49.554	28.017	1	1591500			30422	3921	15079	15139	35094	35094		66			-0.02115444342689443
RYMWINQEL	9	Unmodified	_RYMWINQEL_					0	0	0		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8114501833916	2	626.81079	1251.60703	0.82107	0.00051465	1.7951	0.0011252	2.6162	0.0016398	626.811647015546	52.248	0.50058	53.645	53.46	53.961	1.3966					31	15	4	0	0	0	0.037098	2	21889	21840;21889		78.728	31.134	1	4306100			30423	3921	15079	15140	35095;35096	35096					-0.008711404800806122
RYMWINQEL	9	Unmodified	_RYMWINQEL_					0	0	0		ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	ENSG00000166813|ENST00000394412|KIF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8115722537041	2	626.81079	1251.60703	0.2901	0.00018184	0.83461	0.00052314	1.1247	0.00070498	626.8115006989278	51.637	0.49732	53.609	53.426	53.923	1.9722					42	15	4	0	0	0	0.029061	3	21638	21592;21638;21694		88.954	56.168	1	4620600			30424	3921	15079	15140	35097;35098;35099	35098					-0.008711404800806122
RYNPRILFQL	10	Unmodified	_RYNPRILFQL_					0	0	0		ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	ENSG00000164961|ENST00000318410|WASHC5	MSMS	GG20161007_CRH_Patient100_W632_01	3	440.5909606814384	3	440.59094	1318.75099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.457	1	54.857	54.357	55.357	1.4005								0	0	0	0.25054	1	22372	22372		35.612	22.74	1				30425	3809	15080	15141	35100	35100					0.1043644934236454
RYNSQLLSF	9	Unmodified	_RYNSQLLSF_					0	0	0		TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant;ENSG00000072274|ENST00000360110|TFRC	TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant	TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.2979614138603	2	564.29583	1126.57711	1.8926	0.001068	1.369	0.00077253	3.2616	0.0018405	564.2957996549172	45.834	0.37358	47.209	46.992	47.365	1.3751					24	11	3	0	0	0	0.20244	1	19198	19198		32.786	2.1491	1	2263900			30426	880	15081	15142	35101	35101					0.018882438462242135
RYNSQLLSF	9	Unmodified	_RYNSQLLSF_					0	0	0		TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant;ENSG00000072274|ENST00000360110|TFRC	TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant	TFRC|p.N733Afs*6|1|0.15|ENSG00000072274|chr3:196052028-196052029|-/GC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2981445193291	2	564.29583	1126.57711	1.6516	0.00093202	2.6592	0.0015006	4.3109	0.0024326	564.297169501533	45.313	0.34598	47.273	47.083	47.429	1.9596					23	10	3	0	0	0	0.50272	1	18997	18997		15.248	2.206	1	2002900			30427	880	15081	15142	35102	35102					0.018882438462242135
RYPAIIYNI	9	Unmodified	_RYPAIIYNI_					0	0	0		ENST00000507477.1_1_17:47780142-47780651:-|nuORF;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;ENSG00000121073|ENST00000240333|SLC35B1;nc|ENSG00000121073|P78383-2|SLC35B1	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8207275271416	2	561.818941	1121.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.573	1	55.543	55.043	56.043	1.9697								0	0	0	0.052667	1	22446	22446		43.858	18.459	1				30428	2130	15082	15143	35103	35103					0.06738308748322197
RYPAIIYNI	9	Unmodified	_RYPAIIYNI_					0	0	0		ENST00000507477.1_1_17:47780142-47780651:-|nuORF;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;ENSG00000121073|ENST00000240333|SLC35B1;nc|ENSG00000121073|P78383-2|SLC35B1	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8201171755791	2	561.818941	1121.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.687	1	55.657	55.157	56.157	1.9697								0	0	0	0.21022	1	22493	22493		25.399	10.561	1				30429	2130	15082	15143	35104	35104					0.06738308748322197
RYPAIIYNI	9	Unmodified	_RYPAIIYNI_					0	0	0		ENST00000507477.1_1_17:47780142-47780651:-|nuORF;ENST00000504260.5_1_17:47779261-47782716:-|nuORF;ENSG00000121073|ENST00000240333|SLC35B1;nc|ENSG00000121073|P78383-2|SLC35B1	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	ENST00000507477.1_1_17:47780142-47780651:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8195068240166	2	561.818941	1121.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.823	1	55.793	55.293	56.293	1.9697								0	0	0	0.13855	1	22549	22549		30.637	8.8899	1				30430	2130	15082	15143	35105	35105					0.06738308748322197
RYPDRITLI	9	Unmodified	_RYPDRITLI_					0	0	0		ENST00000567040.5_1_16:30087698-30094972:+|nuORF;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENSG00000149923|ENST00000279387|PPP4C	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.8921996951103	3	382.892507	1145.65569	-0.45094	-0.00017266	-0.62912	-0.00024088	-1.0801	-0.00041355	382.89239662042047	37.009	0.66816	38.287	37.875	38.543	1.2778					93	45	3	0	0	0	0.099383	6	15460	15420;15460;15501;15545;15589;15639		49.527	18.824	1	12484000			30431	3254	15083	15144	35106;35107;35108;35109;35110;35111	35107					0.08869096151329359
RYPDRITLI	9	Unmodified	_RYPDRITLI_					0	0	0		ENST00000567040.5_1_16:30087698-30094972:+|nuORF;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENSG00000149923|ENST00000279387|PPP4C	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8345214724541	2	573.835123	1145.65569	0.28926	0.00016599	-0.21548	-0.00012365	0.073773	4.2334E-05	573.8350239138098	37.077	0.60283	38.361	37.908	38.51	1.284					53	39	2	0	0	0	0.047853	4	15546	15461;15502;15546;15586		66.457	30.33	1	7475200			30432	3254	15083	15144	35112;35113;35114;35115	35114					0.08869096151329359
RYPDRITLI	9	Unmodified	_RYPDRITLI_					0	0	0		ENST00000567040.5_1_16:30087698-30094972:+|nuORF;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENSG00000149923|ENST00000279387|PPP4C	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8350707888603	2	573.835123	1145.65569	0.80259	0.00046055	-0.43711	-0.00025083	0.36548	0.00020972	573.8346021226544	36.396	0.46382	38.214	37.893	38.357	1.8176					59	34	2	0	0	0	0.077545	5	15270	15154;15190;15230;15270;15314		61.602	25.475	1	11765000			30433	3254	15083	15144	35116;35117;35118;35119;35120	35119					0.08869096151329359
RYPDRITLI	9	Unmodified	_RYPDRITLI_					0	0	0		ENST00000567040.5_1_16:30087698-30094972:+|nuORF;ENST00000566749.5_1_16:30094185-30096380:+|nuORF;ENSG00000149923|ENST00000279387|PPP4C	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.8921081423759	3	382.892507	1145.65569	0.52178	0.00019978	-1.1423	-0.00043738	-0.62052	-0.00023759	382.89191786482223	36.367	0.56347	38.185	37.813	38.376	1.8176					86	39	3	0	0	0	0.099383	5	15199	15162;15199;15240;15283;15329		49.527	24.646	1	12403000			30434	3254	15083	15144	35121;35122;35123;35124;35125	35122					0.08869096151329359
RYPDSHQLF	9	Unmodified	_RYPDSHQLF_					0	0	0		nc|ENSG00000138757|Q9UN86-2|G3BP2;ENSG00000138757|ENST00000359707|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	nc|ENSG00000138757|Q9UN86-2|G3BP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1513549685478	3	388.192845	1161.55671	0.6423	0.00024934	-0.18571	-7.2091E-05	0.45659	0.00017724	388.19272114946244	25.617	0.55128	26.876	26.558	27.109	1.2594					21	17	2	0	0	0	0.11901	1	10750	10750		2.7352	2.2769	1	451420			30435	2852	15084	15145	35126	35126					-0.017609268135856837
RYPDTIALTF	10	Unmodified	_RYPDTIALTF_					0	0	0		ENST00000505061.5_1_15:42105116-42107966:+|nuORF;nc|ENSG00000137802|O60336-2|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.8202392458916	2	598.819138	1195.62372	1.123	0.00067249	0.035566	2.1297E-05	1.1586	0.00069379	599.3204043864765	58.099	0.40841	60.068	59.901	60.31	1.969					20	12	2	0	0	0	0.33708	1	24396	24396		37.075	6.4381	1	2645800			30436	2788	15085	15146	35127	35127					0.03373683677500594
RYPQSIFSTF	10	Unmodified	_RYPQSIFSTF_					0	0	0		ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.L1514Ffs*17|1|0.21|ENSG00000133812|chr11:9795861-9795862|-/TTGGGGATGTTGCCTGGACCTTGGAA|frameshift_variant;ENSG00000133812|ENST00000256190|SBF2	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.3167602419853	2	623.316763	1244.61897	1.7538	0.0010932	-0.068817	-4.2895E-05	1.685	0.0010503	623.3168739211985	59.072	0.98391	60.492	60.036	61.02	1.4196					44	31	2	0	0	0	0.12602	1	24672	24672		59.368	24.967	1	1372800			30437	2583	15086	15147	35128	35128					0.006447995347571123
RYPQSIFSTF	10	Unmodified	_RYPQSIFSTF_					0	0	0		ENST00000533770.5_1_11:9861043-10215451:-|nuORF;nc|ENSG00000133812|Q86WG5-3|SBF2;SBF2|p.L1514Ffs*17|1|0.21|ENSG00000133812|chr11:9795861-9795862|-/TTGGGGATGTTGCCTGGACCTTGGAA|frameshift_variant;ENSG00000133812|ENST00000256190|SBF2	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	ENST00000533770.5_1_11:9861043-10215451:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.3201782107353	2	623.316763	1244.61897	0.91252	0.00056879	2.1519	0.0013413	3.0644	0.0019101	623.3177810029354	58.294	0.40465	60.263	60.053	60.457	1.969					18	12	2	0	0	0	0.18015	1	24489	24489		51.415	23.786	1	1615800			30438	2583	15086	15147	35129	35129					0.006447995347571123
RYPSNLQLF	9	Unmodified	_RYPSNLQLF_					0	0	0		ENST00000557627.1_1_14:20869071-20871634:-|nuORF;TEP1|p.P1636Cfs*29|1|0.07|ENSG00000129566|chr14:20380332-20380333|-/CA|frameshift_variant;nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	ENST00000557627.1_1_14:20869071-20871634:-|nuORF	ENST00000557627.1_1_14:20869071-20871634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3069335818291	2	569.306198	1136.59784	1.7744	0.0010102	-0.45153	-0.00025706	1.3229	0.00075312	569.306229399326	50.596	0.91105	51.99	51.678	52.589	1.3938					70	29	3	0	0	0	0.3091	1	21332	21332		24.991	2.2547	1	3687000			30439	2409	15087	15148	35130	35130					0.035008342259061465
RYPSNLQLF	9	Unmodified	_RYPSNLQLF_					0	0	0		ENST00000557627.1_1_14:20869071-20871634:-|nuORF;TEP1|p.P1636Cfs*29|1|0.07|ENSG00000129566|chr14:20380332-20380333|-/CA|frameshift_variant;nc|ENSG00000129566|Q99973-2|TEP1;ENSG00000129566|ENST00000262715|TEP1	ENST00000557627.1_1_14:20869071-20871634:-|nuORF	ENST00000557627.1_1_14:20869071-20871634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.3084594607353	2	569.306198	1136.59784	1.5787	0.00089874	-0.065381	-3.7222E-05	1.5133	0.00086152	569.3065803632707	50.006	0.85197	51.983	51.696	52.548	1.9772					64	27	3	0	0	0	0.42097	2	20864	20864;21103		19.362	2.2754	1	3295800			30440	2409	15087	15148	35131;35132	35131					0.035008342259061465
RYPTSIASLAF	11	Unmodified	_RYPTSIASLAF_					0	0	0		ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3	ENST00000481952.1_1_10:124921781-124922345:+|nuORF	ENST00000481952.1_1_10:124921781-124922345:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3329345583916	2	613.332413	1224.65027	1.807	0.0011083	-0.87401	-0.00053606	0.93296	0.00057221	613.3318269532828	59.012	0.7056	60.431	59.942	60.648	1.4196					72	22	4	0	0	0	0.031929	4	24736	24630;24682;24736;24785		78.06	20.339	1	9784700			30441	3389	15088	15149	35133;35134;35135;35136	35135					0.04693372568840459
RYPTSIASLAF	11	Unmodified	_RYPTSIASLAF_					0	0	0		ENST00000481952.1_1_10:124921781-124922345:+|nuORF;nc|ENSG00000154473|O43684-2|BUB3;ENSG00000154473|ENST00000368865|BUB3	ENST00000481952.1_1_10:124921781-124922345:+|nuORF	ENST00000481952.1_1_10:124921781-124922345:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3325073122978	2	613.332413	1224.65027	1.543	0.00094635	-0.70057	-0.00042968	0.84239	0.00051667	613.3319781179256	58.496	0.76057	60.465	59.962	60.723	1.969					68	24	3	0	0	0	0.027179	4	24468	24371;24417;24468;24568		87.258	37.704	1	8830300			30442	3389	15088	15149	35137;35138;35139;35140	35139					0.04693372568840459
RYQFLEEAF	9	Unmodified	_RYQFLEEAF_					0	0	0		nc|ENSG00000197323|Q9UPN9-2|TRIM33;ENSG00000197323|ENST00000358465|TRIM33	nc|ENSG00000197323|Q9UPN9-2|TRIM33	nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.7964965701103	2	601.795663	1201.57677	1.1017	0.00066302	-0.037008	-2.2271E-05	1.0647	0.00064075	601.7956859136646	52.33	0.59335	53.727	53.46	54.053	1.3966					58	18	4	0	0	0	0.0044745	5	21884	21838;21884;21922;21966;22022		123.45	0	1	25005000			30443	4997	15089	15150	35141;35142;35143;35144;35145	35142					-0.01595175873626431
RYQFLEEAF	9	Unmodified	_RYQFLEEAF_					0	0	0		nc|ENSG00000197323|Q9UPN9-2|TRIM33;ENSG00000197323|ENST00000358465|TRIM33	nc|ENSG00000197323|Q9UPN9-2|TRIM33	nc|ENSG00000197323|Q9UPN9-2|TRIM33	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.7960082888603	2	601.795663	1201.57677	0.93903	0.00056511	-0.055823	-3.3594E-05	0.88321	0.00053151	601.7956643123629	51.718	0.65189	53.69	53.426	54.078	1.9722					64	20	4	0	0	0	0.00032761	5	21648	21600;21648;21687;21726;21770		136.33	0	1	30425000			30444	4997	15089	15150	35146;35147;35148;35149;35150	35147					-0.01595175873626431
RYQFTPAFL	9	Unmodified	_RYQFTPAFL_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119;ENSG00000175970|ENST00000344651|UNC119B	nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000175970|ENST00000344651|UNC119B	ENSG00000175970|ENST00000344651|UNC119B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8049194216728	2	571.803291	1141.59203	2.4811	0.0014187	1.3763	0.00078696	3.8574	0.0022057	571.8038307022813	59.859	0.36791	61.279	61.053	61.421	1.4196					29	11	3	0	0	0	0.22154	2	25096	25047;25096		30.637	14.243	1	2095700			30445	1656;4391	15090	15151	35151;35152	35152					0.026897357142161127
RYQFTPAFL	9	Unmodified	_RYQFTPAFL_					0	0	0		nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000109103|ENST00000335765|UNC119;ENSG00000175970|ENST00000344651|UNC119B	nc|ENSG00000109103|Q13432-2|UNC119;ENSG00000175970|ENST00000344651|UNC119B	ENSG00000175970|ENST00000344651|UNC119B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8044921755791	2	571.803291	1141.59203	2.6964	0.0015418	1.5783	0.00090249	4.2747	0.0024443	571.803655824551	59.341	0.33598	61.31	61.099	61.435	1.969					23	10	3	0	0	0	0.22154	2	24913	24859;24913		30.637	7.9003	1	2124200			30446	1656;4391	15090	15151	35153;35154	35154					0.026897357142161127
RYQGGHSR	8	Unmodified	_RYQGGHSR_					0	0	0			REV__nc|ENSG00000105609|O75023-2|LILRB5	REV__nc|ENSG00000105609|O75023-2|LILRB5	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.8304626345634	3	320.83013	959.468561	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.916	1	58.884	58.384	59.384	1.9684								0	0	0	1.0178	1	23876	23876		0.45834	0	1		+		30447	9183	15091	15152	35155	35155					-0.012795026135222543
RYQGVNLYI	9	Unmodified	_RYQGVNLYI_					0	0	0		nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;ENSG00000090621|ENST00000372858|PABPC4	nc|ENSG00000090621|Q13310-2|PABPC4	nc|ENSG00000090621|Q13310-2|PABPC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3079711794853	2	563.306198	1124.59784	2.643	0.0014888	-0.23288	-0.00013118	2.4101	0.0013576	563.3050922442252	44.992	0.35046	46.357	46.18	46.53	1.3653					28	10	3	0	0	0	0.22861	2	18870	18827;18870		32.305	7.3145	1	2600700			30448	1140	15092	15153	35156;35157	35157					0.0405283422589946
RYQGVNLYI	9	Unmodified	_RYQGVNLYI_					0	0	0		nc|ENSG00000090621|Q13310-2|PABPC4;nc|ENSG00000090621|Q13310|PABPC4;ENSG00000090621|ENST00000372858|PABPC4	nc|ENSG00000090621|Q13310-2|PABPC4	nc|ENSG00000090621|Q13310-2|PABPC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3076049685478	2	563.306198	1124.59784	2.2007	0.0012397	0.38689	0.00021794	2.5876	0.0014576	563.3067345513633	44.343	0.35075	46.303	46.162	46.513	1.9596					19	10	2	0	0	0	0.33297	1	18571	18571		25.399	8.3128	1	2121800			30449	1140	15092	15153	35158	35158					0.0405283422589946
RYQKFALPQ	9	Unmodified	_RYQKFALPQ_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8212158083916	2	575.822015	1149.62948	0.3782	0.00021778	-1.7398	-0.0010018	-1.3616	-0.00078406	575.8206790089783	18.264	0.26851	18.437	18.334	18.602	0.17285					16	10	2	0	0	0	0.77526	1	7580	7580		4.3292	0.38484	1	423790		+	30450	336	15093	15154	35159	35159					0.060648269798548426
RYQKFALPQ	9	Unmodified	_RYQKFALPQ_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	575.822015	1149.62948	0.41726	0.00024027	-2.7859	-0.0016042	-2.3686	-0.0013639	575.8208394471716	17.562	0.22095	18.46	18.254	18.475	0.89794	-0.070601	-0.00056073	NaN	4.3292	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	211220		+	30451	336	15093	15154							0.060648269798548426
RYQKFALPQ	9	Unmodified	_RYQKFALPQ_					0	0	0		CON__P02663	CON__P02663	CON__P02663	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	575.822015	1149.62948	0.31137	0.00017929	-2.4044	-0.0013845	-2.093	-0.0012052	575.8212644083728	17.205	0.17792	18.508	18.381	18.559	1.3023	-0.022658	-0.00012139	NaN	4.3292	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244020		+	30452	336	15093	15154							0.060648269798548426
RYQTQPVTL	9	Unmodified	_RYQTQPVTL_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3040038943291	2	553.303655	1104.59276	1.2218	0.000676	-1.0575	-0.00058512	0.16425	9.0883E-05	553.302724249684	25.071	0.23908	26.33	26.166	26.405	1.2594					13	7	2	0	0	0	0.42305	1	10488	10488		19.257	0	1	1011200			30453	4996	15094	15155	35160	35160					0.044645303632933064
RYQTQPVTL	9	Unmodified	_RYQTQPVTL_					0	0	0		nc|ENSG00000197321|O95425-2|SVIL;nc|ENSG00000197321|O95425-4|SVIL;nc|ENSG00000197321|O95425-3|SVIL;ENSG00000197321|ENST00000355867|SVIL	nc|ENSG00000197321|O95425-2|SVIL	nc|ENSG00000197321|O95425-2|SVIL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	553.303655	1104.59276	0.51414	0.00028448	-1.8197	-0.0010068	-1.3056	-0.00072237	553.3025487408157	24.691	0.2127	26.375	26.269	26.482	1.6845	0.022484	-0.00022697	NaN	19.257	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793010			30454	4996	15094	15155							0.044645303632933064
RYRAEHPVPHH	11	Unmodified	_RYRAEHPVPHH_					0	0	0			REV__nc|ENSG00000083896|Q96MU7-2|YTHDC1	REV__nc|ENSG00000083896|Q96MU7-2|YTHDC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9109069705009	3	466.909443	1397.7065	1.6618	0.00077589	2.2148	0.0010341	3.8765	0.00181	466.91042276875794	30.328	0.7971	30.328	30.131	30.928	0					59	25	3	0	0	0	1.0191	1	12775	12775		2.6312	0.88896	1	2779800	+		30455	8837	15095	15156	35161	35161					0.02355438248878272
RYRRVFEK	8	Unmodified	_RYRRVFEK_					0	0	0			REV__ENST00000578082.5_1_17:80416679-80436800:+|nuORF	REV__ENST00000578082.5_1_17:80416679-80436800:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3305541872978	2	577.333082	1152.65161	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.596	1	99.596	99.096	100.1	0								0	0	0	1.0178	1	41687	41687		0.6015	0.076735	1		+		30456	10157	15096	15157	35162	35162					0.08139051448256396
RYRSPYRRRSR	11	Unmodified	_RYRSPYRRRSR_					0	0	0		nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6303588747978	3	518.294179	1551.86071	2.9116	0.0015091	-0.10299	-5.3381E-05	2.8086	0.0014557	518.2942121049992	112.87	0.22981	112.92	112.77	113	0.044189					9	6	2	0	0	0	0.14606	1	48618	48618		3.8459	1.5932	1	5292100			30457	7868	15097	15158	35163	35163					0.10685267734243098
RYRSPYRRRSR	11	Unmodified	_RYRSPYRRRSR_					0	0	0		nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	nc|ENSG00000131051|Q14498-3|RBM39	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	518.294179	1551.86071	3.3546	0.0017387	-2.3958	-0.0012417	0.95882	0.00049695	518.2932290974067	112.92	0.18869	113.07	112.96	113.15	0.14912	0.076021	-0.0016292	NaN	3.8459	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1838200			30458	7868	15097	15158							0.10685267734243098
RYSHEVAV	8	Unmodified	_RYSHEVAV_					0	0	0			REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	REV__nc|ENSG00000105732|Q6ZN55-2|ZNF574	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.2354614138603	3	320.83477	959.482479	-2.3924	-0.00076756	-1.5918	-0.0005107	-3.9842	-0.0012783	320.83410319699954	96.737	0.54102	96.737	96.539	97.08	0					24	17	2	0	0	0	2.3239	1	40562	40562		0.45834	0.18932	1	9127100			30459	9188	15098	15159	35164	35164					0.0011173009489766628
RYSNLILNLF	10	Unmodified	_RYSNLILNLF_					0	0	0		ENST00000587328.2_1_18:39644671-39661098:+|nuORF;ENSG00000078142|ENST00000262039|PIK3C3	ENST00000587328.2_1_18:39644671-39661098:+|nuORF	ENST00000587328.2_1_18:39644671-39661098:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8574706912041	2	626.856055	1251.69756	3.08	0.0019307	-0.58292	-0.00036541	2.497	0.0015653	626.8558613555379	81.399	0.61734	82.632	82.378	82.996	1.2332					48	19	4	0	0	0	0.2264	2	34169	34169;34222		45.74	11.338	1	4310500			30460	972	15099	15160	35165;35166	35165					0.08177651839832834
RYSNLILNLF	10	Unmodified	_RYSNLILNLF_					0	0	0		ENST00000587328.2_1_18:39644671-39661098:+|nuORF;ENSG00000078142|ENST00000262039|PIK3C3	ENST00000587328.2_1_18:39644671-39661098:+|nuORF	ENST00000587328.2_1_18:39644671-39661098:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8574096560478	2	626.856055	1251.69756	1.998	0.0012525	0.12163	7.6242E-05	2.1197	0.0013287	626.856219987788	80.866	0.55833	82.562	82.394	82.953	1.6959					41	17	3	0	0	0	0.42124	2	33911	33911;33961		32.037	5.7693	1	3802600			30461	972	15099	15160	35167;35168	35167					0.08177651839832834
RYSVFFQSL	9	Unmodified	_RYSVFFQSL_					0	0	0		ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	ENST00000497315.5_1_3:64004227-64005057:-|nuORF	ENST00000497315.5_1_3:64004227-64005057:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8016845583916	2	573.800749	1145.58694	2.43	0.0013943	0.082164	4.7146E-05	2.5122	0.0014415	573.8009002954518	59.213	0.82502	60.633	60.381	61.206	1.4196					79	26	5	0	0	0	0.02878	4	24804	24761;24804;24843;24882		89.401	39.468	1	98673000			30462	3706	15100	15161	35169;35170;35171;35172	35170					0.019974318516233325
RYSVFFQSL	9	Unmodified	_RYSVFFQSL_					0	0	0		ENST00000497315.5_1_3:64004227-64005057:-|nuORF;nc|ENSG00000163636|Q15008-3|PSMD6;nc|ENSG00000163636|Q15008-2|PSMD6;ENST00000476464.5_1_3:63996346-64008248:-|nuORF;ENSG00000163636|ENST00000295901|PSMD6;nc|ENSG00000163636|Q15008-4|PSMD6	ENST00000497315.5_1_3:64004227-64005057:-|nuORF	ENST00000497315.5_1_3:64004227-64005057:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8016235232353	2	573.800749	1145.58694	2.1923	0.0012579	-0.35889	-0.00020593	1.8334	0.001052	573.8006504075688	58.711	0.76485	60.68	60.429	61.193	1.969					77	24	5	0	0	0	0.014947	4	24609	24564;24609;24659;24698		103.42	31.16	1	91940000			30463	3706	15100	15161	35173;35174;35175;35176	35174					0.019974318516233325
RYTALQAFKF	10	Unmodified	_RYTALQAFKF_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.5657531619072	3	415.564391	1243.67134	1.4885	0.00061857	2.0763	0.00086285	3.5648	0.0014814	415.5653683383126	46.067	0.37843	47.442	47.146	47.524	1.3751					15	11	2	0	0	0	0.85577	1	19283	19283		6.2344	3.6031	1	540440			30464	621	15101	15162	35177	35177					0.05925382668351631
RYTFYVLEF	9	Unmodified	_RYTFYVLEF_					0	0	0		nc|ENSG00000142892|Q92643-2|PIGK;ENSG00000142892|ENST00000370812|PIGK	nc|ENSG00000142892|Q92643-2|PIGK	nc|ENSG00000142892|Q92643-2|PIGK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.3175536990166	2	619.316232	1236.61791	2.5847	0.0016007	0.27334	0.00016929	2.858	0.00177	619.3161102149737	75.114	0.74066	76.42	76.09	76.83	1.3063					63	23	4	0	0	0	0.036104	3	31514	31469;31514;31569		79.596	31.848	1	9853200			30465	3007	15102	15163	35178;35179;35180	35179					0.009065851658533575
RYTFYVLEF	9	Unmodified	_RYTFYVLEF_					0	0	0		nc|ENSG00000142892|Q92643-2|PIGK;ENSG00000142892|ENST00000370812|PIGK	nc|ENSG00000142892|Q92643-2|PIGK	nc|ENSG00000142892|Q92643-2|PIGK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.3171874880791	2	619.316232	1236.61791	2.5417	0.0015741	0.29671	0.00018376	2.8384	0.0017579	619.3157604668021	74.623	0.65915	76.404	76.131	76.79	1.7817					58	20	4	0	0	0	0.036104	3	31291	31248;31291;31342		79.596	31.848	1	9595700			30466	3007	15102	15163	35181;35182;35183	35182					0.009065851658533575
RYVLHVVAPE	10	Unmodified	_RYVLHVVAPE_					0	0	0		nc|ENSG00000173193|Q460N5-3|PARP14;nc|ENSG00000173193|Q460N5-1|PARP14;ENSG00000173193|ENST00000474629|PARP14;nc|ENSG00000173193|Q460N5-5|PARP14;nc|ENSG00000173193|Q460N5-4|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	nc|ENSG00000173193|Q460N5-3|PARP14	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.8906432986259	3	394.892507	1181.65569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.119	1	38.403	37.903	38.903	1.284								0	0	0	0.65227	1	15582	15582		12.175	2.6308	1				30467	4271	15103	15164	35184	35184					0.07213096151326681
RYWRIEKCH	9	Unmodified	_RYWRIEKCH_					0	0	0		ENST00000557566.1_1_14:78045296-78063654:-|nuORF;ENSG00000100596|ENST00000216484|SPTLC2	ENST00000557566.1_1_14:78045296-78063654:-|nuORF	ENST00000557566.1_1_14:78045296-78063654:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.771	1	4.859	4.359	5.359	0.08803								0	0	0	0.42693	1	1972	1972		0.26902	0.033176	1				30468	1291	15104	15165	35185	35185					0.01190790225246019
RYWRRWNRFCR	11	Unmodified	_RYWRRWNRFCR_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;CACNA1C|p.S1498Afs*17|1|0.18|ENSG00000151067|chr12:2664940-2664940|A/-|frameshift_variant;CACNA1C|p.I1373Sfs*65|1|0.06|ENSG00000151067|chr12:2651667-2651668|-/G|frameshift_variant;CACNA1C|p.V1586Wfs*9|1|0.1|ENSG00000151067|chr12:2666770-2666770|C/-|frameshift_variant	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	849.6102172732353	2	849.936577	1697.8586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.78	1	112.93	112.43	113.43	0.14912								0	0	0	0.63775	1	48849	48849		0.30703	0	1				30469	7578	15105	15166	35186	35186					0.03758515724780409
RYYEYGWH	8	Unmodified	_RYYEYGWH_					0	0	0			REV__ENST00000422936.5_1_2:32094983-32168444:-|nuORF	REV__ENST00000422936.5_1_2:32094983-32168444:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2841369509697	3	391.841924	1172.50394	0.14871	5.8271E-05	-1.9022	-0.00074535	-1.7534	-0.00068708	392.17506353894396	8.629	0.11944	8.7053	8.6509	8.7704	0.076321					12	8	2	0	0	0	2.3239	1	3567	3567		0.45834	0	1	300030	+		30470	12981	15106	15167	35187	35187					-0.07540884876402743
SAAEHFSII	9	Unmodified	_SAAEHFSII_					0	0	0		ENSG00000181588|ENST00000402693|MEX3D;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D;chr19:1555389-1555577|427|18.37|0.46|5.31|-|ENST00000605173|MEX3D,MEX3D	ENSG00000181588|ENST00000402693|MEX3D	ENSG00000181588|ENST00000402693|MEX3D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7534057497978	2	487.750724	973.486896	2.3979	0.0011696	-0.31491	-0.0001536	2.083	0.001016	487.7506128378716	40.578	0.28249	41.888	41.756	42.039	1.3102					12	8	2	0	0	0	0.19075	1	17019	17019		34.102	5.0209	1	1015200			30471	4582	15107	15168	35188	35188					-0.0009080548219344564
SAAEHFSII	9	Unmodified	_SAAEHFSII_					0	0	0		ENSG00000181588|ENST00000402693|MEX3D;nc|ENSG00000181588|Q86XN8-2|MEX3D;nc|ENSG00000181588|Q86XN8-3|MEX3D;chr19:1555389-1555577|427|18.37|0.46|5.31|-|ENST00000605173|MEX3D,MEX3D	ENSG00000181588|ENST00000402693|MEX3D	ENSG00000181588|ENST00000402693|MEX3D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7513915896416	2	487.750724	973.486896	1.9533	0.00095272	-0.086027	-4.196E-05	1.8673	0.00091076	487.7508085217815	40.087	0.34532	41.95	41.768	42.114	1.8624					15	10	2	0	0	0	0.19075	1	16829	16829		34.102	10.082	1	634930			30472	4582	15107	15168	35189	35189					-0.0009080548219344564
SAAEIMAVL	9	Unmodified	_SAAEIMAVL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000483706.1_1_3:53276071-53289958:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	904.4830200076103	1	904.480831	903.473554	1.6106	0.0014568	0.57534	0.00052039	2.1859	0.0019771	904.4812149376398	67.672	0.48394	69.05	68.85	69.334	1.3778					38	15	3	0	0	0	0.031324	3	28406	28362;28406;28462		85.357	32.328	1	6625700			30473	3733	15108	15169	35190;35191;35192	35191					0.017956204142024035
SAAEIMAVL	9	Unmodified	_SAAEIMAVL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000483706.1_1_3:53276071-53289958:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.7448608279228	2	452.744053	903.473554	2.1342	0.00096625	-0.22136	-0.00010022	1.9128	0.00086603	452.7441217435129	67.733	0.45257	69.111	68.85	69.303	1.3778					24	14	2	0	0	0	0.051699	1	28416	28416		67.344	22.937	1	2629100			30474	3733	15108	15169	35193	35193					0.017956204142024035
SAAEIMAVL	9	Unmodified	_SAAEIMAVL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000483706.1_1_3:53276071-53289958:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	904.4831420779228	1	904.480831	903.473554	1.015	0.00091804	0.69669	0.00063015	1.7117	0.0015482	904.4815376669806	67.202	0.45842	69.091	68.86	69.318	1.8889					32	14	3	0	0	0	0.042029	3	28163	28163;28214;28270		74.423	14.033	1	6391900			30475	3733	15108	15169	35194;35195;35196	35194					0.017956204142024035
SAAEIMAVL	9	Unmodified	_SAAEIMAVL_					0	0	0		ENSG00000163931|ENST00000462138|TKT;nc|ENSG00000163931|P29401-2|TKT;ENST00000483706.1_1_3:53276071-53289958:-|nuORF	ENSG00000163931|ENST00000462138|TKT	ENSG00000163931|ENST00000462138|TKT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.7438232302666	2	452.744053	903.473554	1.3934	0.00063085	-0.63207	-0.00028616	0.76133	0.00034469	452.74384151836017	67.236	0.39761	69.125	68.86	69.257	1.8889					20	12	2	0	0	0	0.069258	1	28219	28219		60.39	28.084	1	1379100			30476	3733	15108	15169	35197	35197					0.017956204142024035
SAAELSSKIN	10	Unmodified	_SAAELSSKIN_					0	0	0			REV__ENSG00000058729|ENST00000283109|RIOK2	REV__ENSG00000058729|ENST00000283109|RIOK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2835265994072	2	510.272021	1018.52949	1.618	0.00082562	2.8091	0.0014334	4.4271	0.002259	510.2732537599685	77.615	1.1719	79.366	79.041	80.213	1.7514					104	37	5	0	0	0	0.5476	1	32480	32480		25.399	0.72543	1	122010000	+		30477	8643	15109	15170	35198	35198					0.020965448553738497
SAAELVHFL	9	Unmodified	_SAAELVHFL_					0	0	0		ENST00000526909.5_1_11:710402-726978:+|nuORF;ENSG00000177106|ENST00000318562|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2;ENST00000524474.5_1_11:720617-722550:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7685424685478	2	493.768917	985.523281	2.2901	0.0011308	-1.9548	-0.0009652	0.33532	0.00016557	493.7679987778491	59.138	0.29736	60.557	60.35	60.648	1.4196					23	9	3	0	0	0	0.01705	2	24791	24745;24791		101.72	56.022	1	5381400			30478	4435	15110	15171	35199;35200	35200					0.029940714145254788
SAAELVHFL	9	Unmodified	_SAAELVHFL_					0	0	0		ENST00000526909.5_1_11:710402-726978:+|nuORF;ENSG00000177106|ENST00000318562|EPS8L2;nc|ENSG00000177106|Q9H6S3-3|EPS8L2;ENST00000524474.5_1_11:720617-722550:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	ENST00000526909.5_1_11:710402-726978:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7692748904228	2	493.768917	985.523281	1.9779	0.00097661	-1.6798	-0.00082944	0.29806	0.00014717	493.7682597626063	58.591	0.32149	60.56	60.342	60.663	1.969					23	10	3	0	0	0	0.033521	1	24565	24565		81.864	43.688	1	5867700			30479	4435	15110	15171	35201	35201					0.029940714145254788
SAAGIISLL	9	Unmodified	_SAAGIISLL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	844.5180541872978	1	844.513845	843.506569	1.9717	0.0016652	1.2671	0.0010701	3.2389	0.0027353	844.5146368539905	78.819	0.27827	80.554	80.413	80.691	1.735					14	8	2	0	0	0	0.076627	1	33081	33081		57.471	0	1	910050			30480	4297	15111	15172	35202	35202					0.07855570528568023
SAAGIISLL	9	Unmodified	_SAAGIISLL_					0	0	0		nc|ENSG00000173692|Q99460-2|PSMD1;ENSG00000173692|ENST00000308696|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	nc|ENSG00000173692|Q99460-2|PSMD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	844.513845	843.506569	2.5433	0.0021478	0.12829	0.00010834	2.6716	0.0022562	844.5139661812592	79.315	0.34549	80.582	80.409	80.754	1.2668	0.013686	-0.0003806	NaN	57.471	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1441400			30481	4297	15111	15172							0.07855570528568023
SAAIALEFDDY	11	Unmodified	_SAAIALEFDDY_					0	0	0		tr|A0A553SK76|A0A553SK76_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18060PE=4SV=1	tr|A0A553SK76|A0A553SK76_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18060PE=4SV=1	tr|A0A553SK76|A0A553SK76_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18060PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5247680544853	3	405.524038	1213.55028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.776	1	32.776	32.276	33.276	0								0	0	0	0.63775	1	13732	13732		0.45452	0.046251	1				30482	16275	15112	15173	35203	35203					-0.04794909555607774
SAAKGPPP	8	Unmodified	_SAAKGPPP_					0	0	0		ENSG00000072071|ENST00000361434|ADGRL1;nc|ENSG00000072071|O94910|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.3979369997978	1	724.398815	723.391539	2.3019	0.0016675	-3.5045	-0.0025386	-1.2025	-0.00087112	724.3963607123143	62.059	0.47706	63.477	63.238	63.715	1.4177					33	14	3	0	0	0	0.88958	2	26014	26014;26053		2.8892	0	1	5991000			30483	877	15113	15174	35204;35205	35204					0.01877886117415528
SAAKGPPP	8	Unmodified	_SAAKGPPP_					0	0	0		ENSG00000072071|ENST00000361434|ADGRL1;nc|ENSG00000072071|O94910|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	724.398815	723.391539	2.2464	0.0016273	-3.5447	-0.0025677	-1.2983	-0.00094049	724.3962028579288	63.001	0.46982	63.001	62.77	63.24	0	-0.26863	-5.6334E-05	NaN	2.8892	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4939400			30484	877	15113	15174							0.01877886117415528
SAAKGPPP	8	Unmodified	_SAAKGPPP_					0	0	0		ENSG00000072071|ENST00000361434|ADGRL1;nc|ENSG00000072071|O94910|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	ENSG00000072071|ENST00000361434|ADGRL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	724.398815	723.391539	1.8517	0.0013414	-3.396	-0.00246	-1.5443	-0.0011187	724.3964416963075	63.001	0.46913	63.331	63.036	63.505	0.32974	0.061587	5.1367E-05	NaN	2.8892	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5435800			30485	877	15113	15174							0.01877886117415528
SAALHLPTDD	10	Unmodified	_SAALHLPTDD_					0	0	0			REV__ILK-LPPR1|1|fusion	REV__ILK-LPPR1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	520.2566406130791	2	520.256371	1038.49819	2.6622	0.001385	-1.7857	-0.00092903	0.87654	0.00045602	520.2546497562694	88.972	0.35025	88.972	88.827	89.178	0					26	10	3	0	0	0	0.82019	1	37200	37200		10.074	0.6908	1	1427800	+		30486	10821	15114	15175	35206	35206					-0.01952028178720866
SAALVIPVP	9	Unmodified	_SAALVIPVP_					0	0	0			REV__tr|A0A553SJT9|A0A553SJT9_NIACICatabolitecontrolproteinAOS=NialliacirculansOX=1397GN=ccpAPE=4SV=1	REV__tr|A0A553SJT9|A0A553SJT9_NIACICatabolitecontrolproteinAOS=NialliacirculansOX=1397GN=ccpAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.7734252810478	2	433.770929	865.527304	2.3117	0.0010028	3.2684	0.0014177	5.5801	0.0024205	433.77230291629786	64.73	0.63541	65.057	64.591	65.226	0.32689					45	19	3	0	0	0	0.83213	1	27117	27117		2.0598	0	1	2160900	+		30487	14918	15115	15176	35207	35207					0.08916160908233906
SAAPFFVLF	9	Unmodified	_SAAPFFVLF_					0	0	0		ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2723571658134	2	499.770929	997.527304	3.6781	0.0018382	-3.2236	-0.001611	0.45454	0.00022716	499.7694543795239	97.724	0.11736	97.952	97.863	97.981	0.22776					5	3	2	0	0	0	0.051699	1	41128	41128		67.344	20.423	1	10599000			30488	1786	15116	15177	35208	35208					0.02844160908239246
SAAPFFVLF	9	Unmodified	_SAAPFFVLF_					0	0	0		ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	ENSG00000112473|ENST00000374677|SLC39A7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7711364626884	2	499.770929	997.527304	3.0641	0.0015314	-2.6082	-0.0013035	0.45588	0.00022784	499.76965743598214	97.657	0.12338	97.914	97.814	97.937	0.25636					9	4	3	0	0	0	0.051699	1	41085	41085		67.344	20.423	1	7886700			30489	1786	15116	15177	35209	35209					0.02844160908239246
SAASALHLL	9	Unmodified	_SAASALHLL_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4;ENST00000576972.5_1_16:67914666-67915321:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.7565795779228	2	441.75581	881.497067	2.4653	0.001089	-0.21079	-9.3118E-05	2.2545	0.00099593	441.7563154101292	44.07	0.2491	45.424	45.284	45.533	1.3536					12	7	2	0	0	0	0.1735	1	18475	18475		36.044	0	1	1039800			30490	654	15117	15178	35210	35210					0.05157802243047627
SAASALHLL	9	Unmodified	_SAASALHLL_					0	0	0		ENSG00000038358|ENST00000358933|EDC4;nc|ENSG00000038358|Q6P2E9-2|EDC4;ENST00000576972.5_1_16:67914666-67915321:+|nuORF	ENSG00000038358|ENST00000358933|EDC4	ENSG00000038358|ENST00000358933|EDC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7565795779228	2	441.75581	881.497067	2.153	0.00095108	-0.57551	-0.00025424	1.5774	0.00069684	441.7559027378889	43.389	0.23317	45.333	45.165	45.398	1.9438					11	7	2	0	0	0	0.11478	1	18186	18186		44.407	0	1	660320			30491	654	15117	15178	35211	35211					0.05157802243047627
SAASLYPVL	9	Unmodified	_SAASLYPVL_					0	0	0		ENST00000492429.2_1_17:26883511-26884012:-|nuORF;ENST00000484580.6_1_17:26883511-26887327:-|nuORF;nc|ENSG00000087111|Q96S52-2|PIGS;ENSG00000087111|ENST00000308360|PIGS	ENST00000492429.2_1_17:26883511-26884012:-|nuORF	ENST00000492429.2_1_17:26883511-26884012:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.5116454958916	1	920.50876	919.501483	2.4646	0.0022687	0.20255	0.00018645	2.6672	0.0024552	920.508537861871	60.073	0.44907	61.493	61.206	61.656	1.4196					35	14	3	0	0	0	0.022807	3	25208	25113;25157;25208		97.075	46.22	1	9794700			30492	1084	15118	15179	35212;35213;35214	35214					0.038512666659471506
SAASLYPVL	9	Unmodified	_SAASLYPVL_					0	0	0		ENST00000492429.2_1_17:26883511-26884012:-|nuORF;ENST00000484580.6_1_17:26883511-26887327:-|nuORF;nc|ENSG00000087111|Q96S52-2|PIGS;ENSG00000087111|ENST00000308360|PIGS	ENST00000492429.2_1_17:26883511-26884012:-|nuORF	ENST00000492429.2_1_17:26883511-26884012:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.5090820193291	1	920.50876	919.501483	2.8131	0.0025895	-0.65487	-0.00060282	2.1583	0.0019867	920.5079956945484	59.527	0.41718	61.496	61.286	61.703	1.969					29	13	3	0	0	0	0.0082953	3	24975	24928;24975;25029		109.63	65.222	1	9500200			30493	1084	15118	15179	35215;35216;35217	35216					0.038512666659471506
SADILMLVL	9	Unmodified	_SADILMLVL_					0	0	0			REV__ENSG00000165733|ENST00000374518|BMS1	REV__ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5630370974541	1	974.559081	973.551804	2.6062	0.0025399	1.1571	0.0011277	3.7633	0.0036676	974.5602536549201	85.615	0.49944	85.867	85.601	86.1	0.25227					48	15	4	0	0	0	0.059546	1	35765	35765		64.236	3.8468	1	15395000	+		30494	10794	15119	15180	35218	35218					0.06397052999443531
SADKFQVLL	9	Unmodified	_SADKFQVLL_					0	0	0		ENST00000566843.1_1_15:75631960-75632245:+|nuORF;ENST00000565834.1_1_15:75631960-75632343:+|nuORF;ENSG00000140365|ENST00000267935|COMMD4	ENST00000566843.1_1_15:75631960-75632245:+|nuORF	ENST00000566843.1_1_15:75631960-75632245:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7908813357353	2	510.78985	1019.56515	2.5847	0.0013202	-3.6769	-0.0018781	-1.0922	-0.00055789	511.28861185882687	49.744	0.71519	51.135	50.704	51.419	1.3911					52	22	3	0	0	0	0.053939	2	20847	20797;20847		66.457	18.111	1	4880800			30495	2910	15120	15181	35219;35220	35220					0.056146271030456774
SADKFQVLL	9	Unmodified	_SADKFQVLL_					0	0	0		ENST00000566843.1_1_15:75631960-75632245:+|nuORF;ENST00000565834.1_1_15:75631960-75632343:+|nuORF;ENSG00000140365|ENST00000267935|COMMD4	ENST00000566843.1_1_15:75631960-75632245:+|nuORF	ENST00000566843.1_1_15:75631960-75632245:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7903320193291	2	510.78985	1019.56515	2.0964	0.0010708	-3.5377	-0.001807	-1.4413	-0.0007362	511.2883352540616	49.149	0.68213	51.126	50.73	51.412	1.9772					47	21	3	0	0	0	0.070055	1	20603	20603		60.074	20.117	1	4078800			30496	2910	15120	15181	35221	35221					0.056146271030456774
SADPGILVL	9	Unmodified	_SADPGILVL_					0	0	0		nc|ENSG00000125648|Q9BV35-4|SLC25A23;nc|ENSG00000125648|Q9BV35-2|SLC25A23;ENSG00000125648|ENST00000301454|SLC25A23;nc|ENSG00000125648|Q9BV35-3|SLC25A23	nc|ENSG00000125648|Q9BV35-4|SLC25A23	nc|ENSG00000125648|Q9BV35-4|SLC25A23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5148193240166	1	884.50876	883.501483	2.3988	0.0021217	0.26469	0.00023412	2.6635	0.0023559	884.5095686507893	65.62	0.36691	67.019	66.817	67.184	1.3989					21	11	2	0	0	0	0.12174	1	27499	27499		42.095	0	1	1756900			30497	2266	15121	15182	35222	35222					0.055072666659384595
SADTTILFV	9	Unmodified	_SADTTILFV_					0	0	0		ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	966.5214721560478	1	966.514239	965.506963	1.5231	0.0014721	1.3282	0.0012837	2.8513	0.0027558	966.5165614680296	69.978	0.25296	69.978	69.834	70.087	0					11	7	2	0	0	0	0.24063	1	29171	29171		28.487	12.64	1	554690			30498	2242	15122	15183	35223	35223					0.02282945457761798
SADTTILFV	9	Unmodified	_SADTTILFV_					0	0	0		ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	966.5169555544853	1	966.514239	965.506963	1.3706	0.0013247	-0.14429	-0.00013946	1.2263	0.0011852	966.5141087531367	69.508	0.31436	69.83	69.657	69.972	0.32224					15	9	2	0	0	0	0.19075	1	29104	29104		34.102	12.356	1	621130			30499	2242	15122	15183	35224	35224					0.02282945457761798
SADTTILFV	9	Unmodified	_SADTTILFV_					0	0	0		ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	966.5173828005791	1	966.514239	965.506963	1.7613	0.0017023	1.598	0.0015445	3.3593	0.0032468	966.5158247590873	68.344	0.36374	69.722	69.553	69.916	1.3778					23	11	3	0	0	0	0.076627	2	28660	28660;28711		57.471	22.005	1	2433200			30500	2242	15122	15183	35225;35226	35225					0.02282945457761798
SADTTILFV	9	Unmodified	_SADTTILFV_					0	0	0		ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	ENSG00000124783|ENST00000244763|SSR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	966.5162841677666	1	966.514239	965.506963	1.9681	0.0019022	0.99518	0.00096186	2.9633	0.002864	966.5151209829427	67.801	0.36834	69.671	69.519	69.887	1.87					23	11	3	0	0	0	0.10294	2	28438	28438;28486		48.346	22.005	1	1648100			30501	2242	15122	15183	35227;35228	35227					0.02282945457761798
SAFATPFLV	9	Unmodified	_SAFATPFLV_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	952.5161620974541	1	952.513845	951.506569	1.9395	0.0018474	0.60249	0.00057388	2.542	0.0024213	952.5142859616121	78.35	0.48699	79.617	79.392	79.879	1.2668					53	15	4	0	0	0	0.0017386	4	32877	32835;32877;32916;32955		131.3	82.952	1	47136000			30502	2330	15123	15184	35229;35230;35231;35232	35230					0.028875705285599906
SAFATPFLV	9	Unmodified	_SAFATPFLV_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.7618896365166	2	476.760561	951.506569	2.753	0.0013125	0.26119	0.00012452	3.0142	0.0014371	476.7607336998744	78.385	0.51695	79.652	79.392	79.909	1.2668					54	16	4	0	0	0	0.031324	2	32917	32879;32917		85.357	49.313	1	21494000			30503	2330	15123	15184	35233;35234	35234					0.028875705285599906
SAFATPFLV	9	Unmodified	_SAFATPFLV_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	952.5154907107353	1	952.513845	951.506569	1.801	0.0017155	0.28144	0.00026808	2.0825	0.0019836	952.5139631390483	77.854	0.55252	79.605	79.379	79.932	1.7514					52	17	4	0	0	0	0.0017386	4	32719	32595;32641;32680;32719		131.3	82.952	1	41946000			30504	2330	15123	15184	35235;35236;35237;35238	35238					0.028875705285599906
SAFATPFLV	9	Unmodified	_SAFATPFLV_					0	0	0		ENSG00000127184|ENST00000247655|COX7C;ENST00000511472.5_1_5:85913768-85915283:+|nuORF	ENSG00000127184|ENST00000247655|COX7C	ENSG00000127184|ENST00000247655|COX7C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	476.7617980837822	2	476.760561	951.506569	1.684	0.00080284	0.77687	0.00037038	2.4608	0.0011732	476.76099279874836	77.917	0.5508	79.668	79.35	79.901	1.7514					54	17	4	0	0	0	0.022807	3	32668	32618;32668;32706		97.075	48.729	1	27660000			30505	2330	15123	15184	35239;35240;35241	35240					0.028875705285599906
SAFGFPVIL	9	Unmodified	_SAFGFPVIL_					0	0	0		LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant;ENSG00000213625|ENST00000371065|LEPROT;ENST00000484243.1_1_1:65886407-65895881:+|nuORF	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2009460330009	2	475.770929	949.527304	4.3088	0.00205	0.73605	0.00035019	5.0449	0.0024002	475.7712222723464	94.442	0.37457	95.183	94.95	95.325	0.74124					25	11	3	0	0	0	0.097511	1	39728	39728		16.942	9.0321	1	2089600			30506	5223	15124	15185	35242	35242					0.05052160908223868
SAFGFPVIL	9	Unmodified	_SAFGFPVIL_					0	0	0		LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant;ENSG00000213625|ENST00000371065|LEPROT;ENST00000484243.1_1_1:65886407-65895881:+|nuORF	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	950.5353881716728	1	950.534581	949.527304	3.4838	0.0033115	1.4427	0.0013713	4.9265	0.0046828	950.5353044178481	93.933	0.34489	95.122	94.924	95.269	1.1887					22	10	3	0	0	0	0.022807	2	39532	39479;39532		97.075	35.717	1	3767500			30507	5223	15124	15185	35243;35244	35244					0.05052160908223868
SAFGFPVIL	9	Unmodified	_SAFGFPVIL_					0	0	0		LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant;ENSG00000213625|ENST00000371065|LEPROT;ENST00000484243.1_1_1:65886407-65895881:+|nuORF	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	LEPROT|p.R90P|1|0.09|ENSG00000213625|chr1:65430038-65430038|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1997863650322	2	475.770929	949.527304	3.4066	0.0016208	-1.1582	-0.00055106	2.2484	0.0010697	475.77085761495425	93.883	0.37543	95.137	94.959	95.334	1.2536					23	11	3	0	0	0	0.10591	1	39491	39491		18.135	4.6271	1	1310800			30508	5223	15124	15185	35245	35245					0.05052160908223868
SAFGLPIVF	9	Unmodified	_SAFGLPIVF_					0	0	0		ENSG00000104660|ENST00000321250|LEPROTL1;nc|ENSG00000104660|O95214-2|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	950.5361205935478	1	950.534581	949.527304	3.3058	0.0031423	-1.2505	-0.0011887	2.0553	0.0019536	950.5326523509394	96.259	0.21574	96.68	96.572	96.787	0.4212					15	6	3	0	0	0	0.022807	1	40494	40494		97.075	36.685	1	66259000			30509	1468	15125	15186	35246	35246					0.05052160908223868
SAFGLPIVF	9	Unmodified	_SAFGLPIVF_					0	0	0		ENSG00000104660|ENST00000321250|LEPROTL1;nc|ENSG00000104660|O95214-2|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2001830935478	2	475.770929	949.527304	4.0193	0.0019123	-2.6864	-0.0012781	1.3329	0.00063416	475.7694072787369	96.29	0.21574	96.711	96.572	96.787	0.4212					13	6	3	0	0	0	0.084274	1	40490	40490		30.225	19.11	1	7509700			30510	1468	15125	15186	35247	35247					0.05052160908223868
SAFGLPIVF	9	Unmodified	_SAFGLPIVF_					0	0	0		ENSG00000104660|ENST00000321250|LEPROTL1;nc|ENSG00000104660|O95214-2|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	950.5407592654228	1	950.534581	949.527304	3.4805	0.0033084	-0.10127	-9.6263E-05	3.3793	0.0032121	950.5346694497625	96.103	0.21076	96.505	96.366	96.577	0.40208					16	6	4	0	0	0	0.022807	2	40402	40402;40441		97.075	46.22	1	42657000			30511	1468	15125	15186	35248;35249	35248					0.05052160908223868
SAFGLPIVF	9	Unmodified	_SAFGLPIVF_					0	0	0		ENSG00000104660|ENST00000321250|LEPROTL1;nc|ENSG00000104660|O95214-2|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	ENSG00000104660|ENST00000321250|LEPROTL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	475.3916503787041	2	475.770929	949.527304	3.4051	0.0016201	-0.12123	-5.7676E-05	3.2839	0.0015624	475.77077428506567	96.104	0.21076	96.506	96.366	96.577	0.40208					17	6	3	0	0	0	0.10591	1	40455	40455		18.135	7.0205	1	9762400			30512	1468	15125	15186	35250	35250					0.05052160908223868
SAFGNLILP	9	Unmodified	_SAFGNLILP_					0	0	0		ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	931.5286743044853	1	931.524744	930.517468	2.7782	0.002588	1.142	0.0010638	3.9202	0.0036518	931.5258429228556	77.264	0.54066	78.545	78.378	78.918	1.2809					19	16	2	0	0	0	0.15635	1	32469	32469		37.974	0	1	1366900			30513	3196	15126	15187	35251	35251					0.049429729028588554
SAFGNLILP	9	Unmodified	_SAFGNLILP_					0	0	0		ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.2670165896416	2	466.26601	930.517468	2.4383	0.0011369	0.0020878	9.7348E-07	2.4404	0.0011379	466.26621413877183	76.713	0.64075	78.481	78.321	78.962	1.7672					30	19	3	0	0	0	0.12174	1	32179	32179		42.095	7.9921	1	1230600			30514	3196	15126	15187	35252	35252					0.049429729028588554
SAFGNLILP	9	Unmodified	_SAFGNLILP_					0	0	0		ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	466.26601	930.517468	2.7213	0.0012689	0.54291	0.00025314	3.2642	0.001522	466.26602315157453	77.294	0.60498	78.575	78.313	78.918	1.2809	0.047052	0.00025928	NaN	42.095	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	974480			30515	3196	15126	15187							0.049429729028588554
SAFGNLILP	9	Unmodified	_SAFGNLILP_					0	0	0		ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	ENSG00000148153|ENST00000374242|INIP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	931.524744	930.517468	2.317	0.0021584	1.1553	0.0010762	3.4723	0.0032346	931.5260336757378	76.771	0.35028	78.538	78.353	78.704	1.7672	-0.0035247	7.6176E-06	NaN	37.974	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	934650			30516	3196	15126	15187							0.049429729028588554
SAFLCRFIF	9	Unmodified	_SAFLCRFIF_					0	0	0		ENST00000474436.1_1_9:35089091-35089349:-|nuORF	ENST00000474436.1_1_9:35089091-35089349:-|nuORF	ENST00000474436.1_1_9:35089091-35089349:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.7872192263603	2	552.288963	1102.56337	5.6846	0.0031395	0.86094	0.00047549	6.5455	0.003615	552.7893104664872	88.845	0.19363	89.902	89.788	89.982	1.0562					7	5	2	0	0	0	0.11684	1	37418	37418		7.9102	0	1	517440			30517	6773	15127	15188	35253	35253					0.016192948134403196
SAFPEVRSL	9	Unmodified	_SAFPEVRSL_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;ENST00000485018.1_1_2:43519181-43520149:-|nuORF;nc|ENSG00000115970|Q6YHU6-4|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2709228396416	2	503.271824	1004.5291	2.4825	0.0012494	-2.9546	-0.001487	-0.47207	-0.00023758	503.27128716017455	39.913	0.33434	41.223	41.055	41.389	1.3102					21	10	3	0	0	0	0.40005	1	16748	16748		20.415	4.2654	1	1391000			30518	1943	15128	15189	35254	35254					0.027011699261947797
SAFPEVRSL	9	Unmodified	_SAFPEVRSL_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;nc|ENSG00000115970|Q6YHU6-2|THADA;ENST00000485018.1_1_2:43519181-43520149:-|nuORF;nc|ENSG00000115970|Q6YHU6-4|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.271824	1004.5291	1.4155	0.00071237	0.43125	0.00021703	1.8467	0.0009294	503.2719251204475	39.508	0.46046	41.37	41.092	41.552	1.8624	0.073868	0.00068005	NaN	20.415	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	592780			30519	1943	15128	15189							0.027011699261947797
SAFPFPVTV	9	Unmodified	_SAFPFPVTV_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	964.5159789919853	1	964.513845	963.506569	2.2537	0.0021737	-0.20917	-0.00020175	2.0445	0.001972	964.5135806180377	80.755	0.5432	81.989	81.711	82.255	1.2332					57	17	4	0	0	0	3.7622E-05	4	33878	33829;33878;33930;33970		158.2	54.454	1	98507000			30520	2339	15129	15190	35255;35256;35257;35258	35256					0.02335570528578046
SAFPFPVTV	9	Unmodified	_SAFPFPVTV_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.7620422244072	2	482.760561	963.506569	2.8623	0.0013818	-0.33534	-0.00016189	2.527	0.0012199	482.7603557127238	80.725	0.60413	81.958	81.68	82.284	1.2332					57	19	4	0	0	0	0.002761	4	33830	33830;33879;33931;34004		128.37	50.216	1	36583000			30521	2339	15129	15190	35259;35260;35261;35262	35259					0.02335570528578046
SAFPFPVTV	9	Unmodified	_SAFPFPVTV_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	964.5145751833916	1	964.513845	963.506569	1.2242	0.0011807	-0.88906	-0.00085751	0.33511	0.00032322	964.5128521477964	80.295	0.62892	82.012	81.695	82.324	1.7167					66	20	5	0	0	0	2.0192E-05	4	33642	33601;33642;33682;33734		172.91	57.215	1	78498000			30522	2339	15129	15190	35263;35264;35265;35266	35264					0.02335570528578046
SAFPFPVTV	9	Unmodified	_SAFPFPVTV_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7608520388603	2	482.760561	963.506569	1.0855	0.00052406	-0.28416	-0.00013718	0.80139	0.00038688	482.7603990087192	80.204	0.56675	81.921	81.726	82.293	1.7167					58	18	4	0	0	0	4.1345E-05	5	33694	33612;33655;33694;33736;33793		156.16	71.845	1	48810000			30523	2339	15129	15190	35267;35268;35269;35270;35271	35269					0.02335570528578046
SAFPFPVTVSL	11	Unmodified	_SAFPFPVTVSL_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8217040896416	2	582.818607	1163.62266	4.1126	0.0023969	-0.42034	-0.00024498	3.6922	0.0021519	582.8187171828725	93.023	0.42642	93.895	93.67	94.097	0.87176					25	12	3	0	0	0	0.20118	2	39186	39134;39186		39.95	19.496	1	1572200			30524	2339	15130	15191	35272;35273	35273					0.04739469308628941
SAFPFPVTVSL	11	Unmodified	_SAFPFPVTVSL_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8238403201103	2	582.818607	1163.62266	3.1959	0.0018627	1.4258	0.00083098	4.6217	0.0026936	582.8197680174811	92.55	0.35744	93.877	93.699	94.057	1.3269					23	10	3	0	0	0	0.24501	1	38947	38947		36.506	13.77	1	1073200			30525	2339	15130	15191	35274	35274					0.04739469308628941
SAFPHLRVL	9	Unmodified	_SAFPHLRVL_					0	0	0		nc|ENSG00000254536|Q6QHF9-6|PAOX;nc|ENSG00000254536|Q6QHF9-5|PAOX;nc|ENSG00000254536|Q6QHF9-4|PAOX;ENSG00000148832|ENST00000278060|PAOX	nc|ENSG00000254536|Q6QHF9-6|PAOX	nc|ENSG00000254536|Q6QHF9-6|PAOX	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2064391970634	3	347.206426	1038.59745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.504	1	42.367	41.867	42.867	1.8624								0	0	0	0.2924	1	16980	16980		19.362	7.1213	1				30526	3223	15131	15192	35275	35275					0.07969459296691639
SAFPHLRVL	9	Unmodified	_SAFPHLRVL_					0	0	0		nc|ENSG00000254536|Q6QHF9-6|PAOX;nc|ENSG00000254536|Q6QHF9-5|PAOX;nc|ENSG00000254536|Q6QHF9-4|PAOX;ENSG00000148832|ENST00000278060|PAOX	nc|ENSG00000254536|Q6QHF9-6|PAOX	nc|ENSG00000254536|Q6QHF9-6|PAOX	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2063171267509	3	347.206426	1038.59745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.655	1	42.518	42.018	43.018	1.8624								0	0	0	0.35083	1	17042	17042		13.615	6.9914	1				30527	3223	15131	15192	35276	35276					0.07969459296691639
SAFPQQLTM	9	Unmodified	_SAFPQQLTM_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7517578005791	2	511.75241	1021.49027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.036	1	53.432	52.932	53.932	1.3966								0	0	0	0.22909	1	21786	21786		24.021	5.8742	1				30528	2109	15132	15193	35277	35277					-0.019618786998421456
SAFPQQLTM	9	Unmodified	_SAFPQQLTM_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7526733279228	2	511.75241	1021.49027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.169	1	53.565	53.065	54.065	1.3966								0	0	0	0.3792	1	21841	21841		10.824	4.6181	1				30529	2109	15132	15193	35278	35278					-0.019618786998421456
SAFPQQLTM	9	Unmodified	_SAFPQQLTM_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7544433474541	2	511.75241	1021.49027	1.0876	0.00055659	-0.83661	-0.00042814	0.25099	0.00012845	511.75190317978206	51.605	0.66998	53.577	53.284	53.954	1.9722					34	21	2	0	0	0	0.51189	2	21602	21602;21658		14.838	7.7003	1	1158300			30530	2109	15132	15193	35279;35280	35279					-0.019618786998421456
SAFPQTPAAP	10	Unmodified	_SAFPQTPAAP_					0	0	0		EHMT1-ATP13A1|1|fusion;nc|ENSG00000181090|Q9H9B1-4|EHMT1;ENST00000371394.6_1_9:140611085-140686569:+|nuORF;nc|ENSG00000181090|Q9H9B1-3|EHMT1;ENSG00000181090|ENST00000460843|EHMT1	EHMT1-ATP13A1|1|fusion	EHMT1-ATP13A1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7523071169853	2	493.750724	985.486896	2.7858	0.0013755	0.68055	0.00033602	3.4663	0.0017115	493.75108157015666	80.744	0.45092	81.977	81.742	82.193	1.2332					39	14	4	0	0	0	0.28421	1	33868	33868		40.239	0.28188	1	13866000			30531	442	15133	15194	35281	35281					-0.006428054821981277
SAFPSNIFY	9	Unmodified	_SAFPSNIFY_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.499926745892	1	1045.49892	1044.49165	2.28	0.0023838	-1.0706	-0.0011193	1.2094	0.0012645	1045.496805713262	69.559	0.98605	70.925	70.674	71.66	1.3657					54	31	2	0	0	0	0.086433	4	29169	29169;29219;29268;29376		53.833	8.1332	1	2077000			30532	477	15134	15195	35282;35283;35284;35285	35282					-0.02881921339417204
SAFPSNIFY	9	Unmodified	_SAFPSNIFY_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.3058959841728	2	523.2531	1044.49165	2.5007	0.0013085	-0.98597	-0.00051591	1.5147	0.00079256	523.253397604628	69.717	0.67406	71.07	70.662	71.336	1.3536					40	21	3	0	0	0	0.046979	1	29245	29245		49.933	19.708	1	2316900			30533	477	15134	15195	35286	35286					-0.02881921339417204
SAFPSNIFY	9	Unmodified	_SAFPSNIFY_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1045.501147449017	1	1045.49892	1044.49165	2.9182	0.003051	-2.7734	-0.0028995	0.14489	0.00015148	1045.4957535890326	69.088	1.2161	70.941	70.648	71.864	1.853					65	38	2	0	0	0	0.073578	3	29167	29034;29116;29167		58.679	20.503	1	1234500			30534	477	15134	15195	35287;35288;35289	35289					-0.02881921339417204
SAFPYAHRF	9	Unmodified	_SAFPYAHRF_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	366.1853515505791	3	365.850531	1094.52976	0.33312	0.00012187	0.87676	0.00032076	1.2099	0.00044264	365.8505608250592	26.745	0.3175	28.492	28.425	28.743	1.747					15	10	2	0	0	0	0.51189	1	11262	11262		10.151	7.6521	1	644830			30535	2329	15135	15196	35290	35290					-0.013719906341293608
SAFPYAHRF	9	Unmodified	_SAFPYAHRF_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	365.850531	1094.52976	0.035704	1.3062E-05	0.866	0.00031683	0.9017	0.00032989	366.18535990440205	27.315	0.30663	28.59	28.44	28.747	1.275	0.049037	-2.8511E-06	NaN	10.151	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655800			30536	2329	15135	15196							-0.013719906341293608
SAFSRIMKL	9	Unmodified	_SAFSRIMKL_					0	0	0		ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-2|USP45	ENSG00000123552|ENST00000500704|USP45	ENSG00000123552|ENST00000500704|USP45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8021728396416	2	526.799694	1051.58484	2.3454	0.0012356	1.355	0.00071382	3.7004	0.0019494	526.8003552885651	39.31	0.44955	40.606	40.443	40.893	1.2961					36	14	3	0	0	0	0.10478	1	16490	16490		47.732	5.6374	1	2191400			30537	2194	15136	15197	35291	35291					0.06110679842163336
SAFSRIMKL	9	Unmodified	_SAFSRIMKL_					0	0	0		ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-2|USP45	ENSG00000123552|ENST00000500704|USP45	ENSG00000123552|ENST00000500704|USP45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.5359069705009	3	351.535555	1051.58484	0.80106	0.0002816	-0.19016	-6.6846E-05	0.61091	0.00021476	351.53548250122964	38.668	0.54433	40.504	40.304	40.848	1.8366					35	16	3	0	0	0	0.15456	1	16223	16223		29.437	2.2139	1	6113100			30538	2194	15136	15197	35292	35292					0.06110679842163336
SAFSRIMKL	9	Unmodified	_SAFSRIMKL_					0	0	0		ENSG00000123552|ENST00000500704|USP45;nc|ENSG00000123552|Q70EL2-2|USP45	ENSG00000123552|ENST00000500704|USP45	ENSG00000123552|ENST00000500704|USP45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8015624880791	2	526.799694	1051.58484	1.3459	0.000709	1.8261	0.00096199	3.172	0.001671	526.8006278657849	38.681	0.54633	40.517	40.367	40.913	1.8366					34	16	3	0	0	0	0.16434	1	16269	16269		37.075	10.807	1	1536700			30539	2194	15136	15197	35293	35293					0.06110679842163336
SAFTNRIFF	9	Unmodified	_SAFTNRIFF_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1;nc|ENSG00000102158|Q9H0U3-2|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.7883788943291	2	551.787641	1101.56073	0.49874	0.0002752	0.71254	0.00039317	1.2113	0.00066837	551.7877053430657	58.229	0.29379	59.647	59.49	59.784	1.4181					21	9	3	0	0	0	0.0037498	2	24397	24397;24445		125.53	77.78	1	7718600			30540	1382	15137	15198	35294;35295	35294					0.014011626801448074
SAFTNRIFF	9	Unmodified	_SAFTNRIFF_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1;nc|ENSG00000102158|Q9H0U3-2|MAGT1;ENST00000476168.1_1_X:77112151-77150907:-|nuORF	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.7878295779228	2	551.787641	1101.56073	0.27286	0.00015056	0.70947	0.00039148	0.98232	0.00054203	551.7884561392582	57.609	0.28795	59.577	59.468	59.756	1.9687					21	12	2	0	0	0	0.032536	3	24186	24140;24186;24229		83.429	52.792	1	5988900			30541	1382	15137	15198	35296;35297;35298	35297					0.014011626801448074
SAFYCLMW	8	Unmodified	_SAFYCLMW_					0	0	0		ENSG00000274386|ENST00000637012|TMEM269	ENSG00000274386|ENST00000637012|TMEM269	ENSG00000274386|ENST00000637012|TMEM269	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	340.8156921267509	3	340.815442	1019.4245	0.73145	0.00024929	-1.4921	-0.00050854	-0.76067	-0.00025925	340.81557959376767	80.252	0.50357	81.969	81.758	82.261	1.7167					45	14	4	0	0	0	0.87106	1	33710	33710		15.847	4.3525	1	4159200			30542	5454	15138	15199	35299	35299					-0.08443991146396002
SAHLSCVLLIP	11	Carbamidomethyl (C)	_SAHLSC(Carbamidomethyl (C))VLLIP_	SAHLSC(1)VLLIP		SAHLSC(50)VLLIP		0	1	0			REV__ENSG00000115919|ENST00000264170|KYNU	REV__ENSG00000115919|ENST00000264170|KYNU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.3370849490166	2	605.336641	1208.65873	1.6173	0.00097901	-0.98725	-0.00059762	0.63005	0.00038139	605.336041517457	66.495	0.31445	68.383	68.182	68.497	1.8889					20	9	3	0	0	0	0.13258	1	27893	27893		49.933	7.8384	1	1321300	+		30543	9461	15139	15200	35300	35300	16				0.06274603213819319
SAHLSCVLLIP	11	Carbamidomethyl (C)	_SAHLSC(Carbamidomethyl (C))VLLIP_					0	1	0			REV__ENSG00000115919|ENST00000264170|KYNU	REV__ENSG00000115919|ENST00000264170|KYNU	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	605.336641	1208.65873	1.6173	0.00097901	-0.98725	-0.00059762	0.63005	0.00038139	605.336041517457	66.495	0.31445	68.383	68.182	68.497	1.8889	-0.0038921	0.00042681	NaN	49.933	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1321300	+		30544	9461	15139	15200			16				0.06274603213819319
SAIDRIFTL	9	Unmodified	_SAIDRIFTL_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2969848513603	2	518.295299	1034.57605	3.3464	0.0017344	-0.24113	-0.00012498	3.1052	0.0016094	518.2952955667781	64.5	0.82807	65.907	65.591	66.419	1.4071					82	26	5	0	0	0	0.0051619	3	27027	27027;27066;27105		121.35	53.265	1	96406000			30545	4655	15140	15201	35301;35302;35303	35301					0.060140294773418645
SAIDRIFTL	9	Unmodified	_SAIDRIFTL_					0	0	0		ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	ENSG00000183576|ENST00000331768|SETD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2968017458916	2	518.295299	1034.57605	2.9781	0.0015436	0.13914	7.2115E-05	3.1173	0.0016157	518.2954152556176	63.976	0.65125	65.904	65.582	66.233	1.928					63	20	5	0	0	0	0.0013614	3	26882	26804;26843;26882		132.38	46.738	1	86956000			30546	4655	15140	15201	35304;35305;35306	35306					0.060140294773418645
SAIPEEEID	9	Unmodified	_SAIPEEEID_					0	0	0		MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant;ENSG00000151690|ENST00000392328|MFSD6	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.8254882693291	3	334.825717	1001.45532	0.70573	0.0002363	-2.6866	-0.00089954	-1.9809	-0.00066324	334.82473029164555	80.294	0.47274	82.011	81.789	82.261	1.7167					40	15	4	0	0	0	0.70577	1	33757	33757		7.1017	2.2047	1	5705800			30547	3296	15141	15202	35307	35307					-0.045348430268063566
SAIPHPLIM	9	Unmodified	_SAIPHPLIM_					0	0	0		ENST00000559016.1_1_15:49426483-49429634:-|nuORF;ENSG00000166200|ENST00000388901|COPS2;nc|ENSG00000166200|P61201-2|COPS2	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7769348025322	2	489.775688	977.536823	1.7178	0.00084135	0.10928	5.3523E-05	1.8271	0.00089487	489.7762335418131	46.038	0.37747	47.413	47.177	47.555	1.3751					36	11	4	0	0	0	0.0082953	3	19273	19229;19273;19315		109.63	49.24	1	6577200			30548	3887	15142	15203	35308;35309;35310	35309					0.04715605922126542
SAIPHPLIM	9	Unmodified	_SAIPHPLIM_					0	0	0		ENST00000559016.1_1_15:49426483-49429634:-|nuORF;ENSG00000166200|ENST00000388901|COPS2;nc|ENSG00000166200|P61201-2|COPS2	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	ENST00000559016.1_1_15:49426483-49429634:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7765075564384	2	489.775688	977.536823	1.5647	0.00076635	-0.70435	-0.00034497	0.86034	0.00042138	489.77603262929347	45.558	0.44711	47.528	47.28	47.727	1.9703					37	13	4	0	0	0	0.028763	3	19088	19040;19088;19139		89.427	35.851	1	4229000			30549	3887	15142	15203	35311;35312;35313	35312					0.04715605922126542
SAKHRIISP	9	Unmodified	_SAKHRIISP_					0	0	0		CAMTA1|p.V1621Gfs*12|1|0.03|ENSG00000171735|chr1:7751370-7751371|-/GGGACCACGTGGTTATTCAGCTGGAGTGGGTT|frameshift_variant;nc|ENSG00000171735|Q9Y6Y1-2|CAMTA1;ENSG00000171735|ENST00000303635|CAMTA1	CAMTA1|p.V1621Gfs*12|1|0.03|ENSG00000171735|chr1:7751370-7751371|-/GGGACCACGTGGTTATTCAGCTGGAGTGGGTT|frameshift_variant	CAMTA1|p.V1621Gfs*12|1|0.03|ENSG00000171735|chr1:7751370-7751371|-/GGGACCACGTGGTTATTCAGCTGGAGTGGGTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8709899783134	3	336.869814	1007.58761	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.452	1	59.421	58.921	59.921	1.9684								0	0	0	0.42693	1	24099	24099		2.4985	1.5362	1				30550	116	15143	15204	35314	35314					0.08412271291331308
SALALSLLLV	10	Unmodified	_SALALSLLLV_					0	0	0		ENST00000565325.5_1_15:73854253-73925580:-|nuORF;nc|ENSG00000156642|Q9Y639-3|NPTN;nc|ENSG00000156642|Q9Y639-1|NPTN;nc|ENSG00000156642|Q9Y639-5|NPTN;ENSG00000156642|ENST00000345330|NPTN;ENST00000563753.1_1_15:73884305-73925556:-|nuORF;nc|ENSG00000156642|Q9Y639-4|NPTN	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	ENST00000565325.5_1_15:73854253-73925580:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3273193240166	2	500.326068	998.637583	1.4666	0.00073378	2.2667	0.0011341	3.7333	0.0018679	500.3257741903364	96.305	0.1234	96.305	96.23	96.354	0					6	3	2	0	0	0	0.28892	1	40265	40265		39.957	0	1	2459600			30551	3453	15144	15205	35315	35315					0.1382096117662286
SALARLPLW	9	Unmodified	_SALARLPLW_					0	0	0			REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	REV__ENST00000374280.3_1_1:26349336-26349810:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8753234744072	3	342.874677	1025.6022	1.0272	0.0003522	0.26034	8.9263E-05	1.2875	0.00044146	342.8746265208564	36.497	0.72542	36.799	36.569	37.295	0.30197					125	48	4	0	0	0	0.82114	1	15523	15523		2.4985	0.21571	1	15443000	+		30552	12704	15145	15206	35316	35316					0.09042343439477918
SALEHVVEF	9	Unmodified	_SALEHVVEF_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7651244997978	2	515.763832	1029.51311	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.628	1	45.993	45.493	46.493	1.3653								0	0	0	0.0071562	1	18706	18706		96.285	47.939	1				30553	846	15146	15207	35317	35317					-0.00046536310719602625
SALEHVVEF	9	Unmodified	_SALEHVVEF_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7650634646416	2	515.763832	1029.51311	2.4779	0.001278	0.34048	0.00017561	2.8184	0.0014536	515.7638911911382	44.059	0.6916	46.002	45.516	46.208	1.9438					36	21	3	0	0	0	0.037761	1	18464	18464		78.149	29.804	1	2764700			30554	846	15146	15207	35318	35318					-0.00046536310719602625
SALFAQLATV	10	Unmodified	_SALFAQLATV_					0	0	0			REV__ENST00000530578.1_1_11:122665536-122667965:+|nuORF	REV__ENST00000530578.1_1_11:122665536-122667965:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7909118533134	2	510.78985	1019.56515	2.2047	0.0011261	0.36	0.00018388	2.5647	0.00131	510.79007059406166	51.99	0.37125	51.99	51.789	52.161	0					25	11	3	0	0	0	0.76954	1	21744	21744		15.248	1.7406	1	1703600	+		30555	13703	15147	15208	35319	35319					0.05614627103057046
SALHIIVQY	9	Unmodified	_SALHIIVQY_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2993652224541	2	522.297842	1042.58113	1.809	0.00094484	1.6246	0.00084854	3.4336	0.0017934	522.2988332579052	46.392	0.33831	47.767	47.586	47.925	1.3751					27	10	3	0	0	0	0.12251	2	19444	19397;19444		41.84	13.353	1	2248000			30556	4064	15148	15209	35320;35321	35321					0.06154333339964069
SALHIIVQY	9	Unmodified	_SALHIIVQY_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2991821169853	2	522.297842	1042.58113	1.1987	0.0006261	1.7453	0.00091159	2.9441	0.0015377	522.2992435308215	45.927	0.39801	47.897	47.758	48.156	1.9703					26	12	3	0	0	0	0.18809	2	19259	19208;19259		34.402	12.655	1	1854300			30557	4064	15148	15209	35322;35323	35323					0.06154333339964069
SALKAKKQN	9	Unmodified	_SALKAKKQN_					0	0	0			REV__UBAP1|p.T280K|1|0.06|ENSG00000165006|chr9:34241864-34241864|C/A|missense_variant	REV__UBAP1|p.T280K|1|0.06|ENSG00000165006|chr9:34241864-34241864|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3012878298759	2	494.300916	986.587279	1.1906	0.00058849	0.18984	9.3836E-05	1.3804	0.00068233	494.30095493188617	80.196	1.2804	81.912	81.443	82.724	1.7167					95	41	5	0	0	0	0.83753	1	33631	33631		1.8442	0	1	53493000	+		30558	15929	15149	15210	35324	35324					0.09344851571472645
SALMVHLRI	9	Unmodified	_SALMVHLRI_					0	0	0		ENSG00000182318|ENST00000329665|ZSCAN22	ENSG00000182318|ENST00000329665|ZSCAN22	ENSG00000182318|ENST00000329665|ZSCAN22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2068359255791	3	347.20755	1038.60082	1.0734	0.0003727	3.3083	0.0011487	4.3818	0.0015214	347.2065278909204	40.964	0.7537	42.289	41.929	42.683	1.3254					55	23	3	0	0	0	0.59568	1	17196	17196		11.495	0.6952	1	6380700			30559	4611	15150	15211	35325	35325					0.08306386079061667
SALVVSPLIRV	11	Unmodified	_SALVVSPLIRV_					0	0	0			REV__ENST00000518210.5_1_6:74171896-74172010:+|nuORF	REV__ENST00000518210.5_1_6:74171896-74172010:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3690063357353	2	577.368798	1152.72304	4.5246	0.0026123	-2.7104	-0.0015649	1.8142	0.0010475	577.3671038935288	87.504	0.56018	88.596	88.335	88.895	1.0918					64	17	5	0	0	0	1.0131	1	36896	36896		2.9952	1.151	1	32880000	+		30560	13611	15151	15212	35326	35326					0.1527912636227029
SAMEVVPAL	9	Unmodified	_SAMEVVPAL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1730224490166	2	458.744053	915.473554	1.5129	0.00069404	-0.30369	-0.00013932	1.2092	0.00055472	458.7443415493528	58.633	0.3815	60.051	59.815	60.196	1.4181					19	11	2	0	0	0	0.067699	1	24612	24612		16.942	3.4344	1	2502800			30561	2648	15152	15213	35327	35327					0.0124362041420909
SAMEVVPAL	9	Unmodified	_SAMEVVPAL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	916.4779540896416	1	916.480831	915.473554	0.92947	0.00085184	4.0738	0.0037336	5.0033	0.0045854	916.484731374707	58.048	0.49439	60.017	59.784	60.279	1.969					36	15	3	0	0	0	0.069258	1	24327	24327		60.39	15.983	1	7283200			30562	2648	15152	15213	35328	35328					0.0124362041420909
SAMEVVPAL	9	Unmodified	_SAMEVVPAL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.7451660037041	2	458.744053	915.473554	1.1974	0.0005493	0.067369	3.0905E-05	1.2648	0.00058021	458.74420467865497	58.099	0.43251	60.068	59.814	60.247	1.969					22	13	2	0	0	0	0.069258	1	24376	24376		60.39	6.814	1	10825000			30563	2648	15152	15213	35329	35329					0.0124362041420909
SAMGYLLFGTD	11	Unmodified	_SAMGYLLFGTD_					0	0	0		ENST00000578774.1_1_17:38520220-38520388:+|nuORF	ENST00000578774.1_1_17:38520220-38520388:+|nuORF	ENST00000578774.1_1_17:38520220-38520388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	587.7765991091728	2	587.776082	1173.53761	1.3794	0.00081076	0.46641	0.00027415	1.8458	0.0010849	587.7763575455875	29.133	0.82528	29.133	28.628	29.453	0					74	26	4	0	0	0	0.77451	1	12123	12123		16.149	0	1	3260000			30564	7424	15153	15214	35330	35330					-0.04221644219501286
SANHSESDSL	10	Unmodified	_SANHSESDSL_					0	0	0		ENSG00000163872|ENST00000305135|YEATS2	ENSG00000163872|ENST00000305135|YEATS2	ENSG00000163872|ENST00000305135|YEATS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7244750857353	2	523.722892	1045.43123	2.7428	0.0014365	0.0037147	1.9455E-06	2.7465	0.0014384	523.7232325029692	76.213	0.345	77.981	77.782	78.127	1.7672					19	10	2	0	0	0	0.81948	1	31963	31963		3.9444	0	1	978500			30565	3728	15154	15215	35331	35331					-0.08966683460471359
SAPNDEDW	8	Unmodified	_SAPNDEDW_					0	0	0		ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	MSMS	GG20161007_CRH_Patient100_A02_02	2	467.1843749880791	2	467.182872	932.35119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.35	1	107.4	106.9	107.9	0.052452								0	0	0	1.0178	1	45902	45902		0.69038	0	1				30566	1156	15155	15216	35332	35332					-0.11769125063665342
SAPVPVEIENL	11	Unmodified	_SAPVPVEIENL_					0	0	0		ENST00000495030.1_1_2:120858295-120865750:+|nuORF;ENST00000489017.5_1_2:120849230-120859177:+|nuORF;ENST00000461128.1_1_2:120849230-120885432:+|nuORF;nc|ENSG00000115109|Q9HCM4-2|EPB41L5;nc|ENSG00000115109|Q9HCM4-4|EPB41L5;nc|ENSG00000115109|Q9HCM4-3|EPB41L5;ENSG00000115109|ENST00000263713|EPB41L5	ENST00000495030.1_1_2:120858295-120865750:+|nuORF	ENST00000495030.1_1_2:120858295-120865750:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3157226443291	2	584.316428	1166.6183	1.9542	0.0011419	-2.8347	-0.0016563	-0.88046	-0.00051447	584.314649705529	55.324	0.24839	55.324	55.184	55.433	0					19	11	2	0	0	0	0.92747	1	23032	23032		8.1555	1.9497	1	2467600			30567	1896	15156	15217	35333	35333					0.04165960095042465
SAPVRLLL	8	Unmodified	_SAPVRLLL_					0	0	0			REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF	REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	868.5646850466728	1	868.561464	867.554188	1.1831	0.0010276	2.4831	0.0021568	3.6662	0.0031843	868.5638011029154	109.38	0.26063	109.38	109.22	109.48	0					27	11	3	0	0	0	0.89178	1	47279	47279		0.69038	0	1	29510000	+		30568	12416	15157	15218	35334	35334					0.11511269519428424
SAPVRLLL	8	Unmodified	_SAPVRLLL_					0	0	0			REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF	REV__ENST00000529734.5_1_11:46105847-46142581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	868.5649291872978	1	868.561464	867.554188	3.0395	0.00264	0.47238	0.00041029	3.5119	0.0030503	868.5616877405465	109.35	0.46019	109.51	109.19	109.65	0.15898					56	21	5	0	0	0	0.89178	1	47405	47405		0.69038	0	1	338740000	+		30569	12416	15157	15218	35335	35335					0.11511269519428424
SAPVTDGPSLL	11	Unmodified	_SAPVTDGPSLL_					0	0	0			REV__ENST00000400762.7_1_4:1193492-1195154:-|nuORF	REV__ENST00000400762.7_1_4:1193492-1195154:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1056.560351550579	1	1056.55717	1055.54989	3.7895	0.0040038	-1.5786	-0.0016679	2.2108	0.0023359	1056.556224257195	86.423	0.44836	87.55	87.299	87.747	1.1265					25	17	2	0	0	0	0.20118	1	36408	36408		39.95	5.548	1	8854800	+		30570	12882	15158	15219	35336	35336					0.024337155151897605
SARDQFFC	8	Unmodified	_SARDQFFC_					0	0	0			REV__ENST00000564150.1_1_16:58147931-58149427:-|nuORF	REV__ENST00000564150.1_1_16:58147931-58149427:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.2961303591728	2	487.213452	972.412351	2.7884	0.0013585	-0.26019	-0.00012677	2.5282	0.0012318	487.21309244840177	59.542	0.26664	61.511	61.345	61.612	1.969					20	8	3	0	0	0	2.3239	1	24961	24961		7.2892	0	1	2677800	+		30571	13919	15159	15220	35337	35337					-0.0749589156522461
SARSAPATPFF	11	Unmodified	_SARSAPATPFF_					0	0	0			REV__nc|ENSG00000112425|B3EWF7|EPM2A	REV__nc|ENSG00000112425|B3EWF7|EPM2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1538879275322	3	384.532979	1150.57711	1.4659	0.0005637	2.8761	0.001106	4.3421	0.0016697	384.5345920532425	49.533	0.43956	51.51	51.349	51.788	1.9772					18	13	2	0	0	0	0.14606	1	20859	20859		0.40827	0.13925	1	518360	+		30572	14410	15160	15221	35338	35338					0.007842438462375867
SARSDDEVQQT	11	Unmodified	_SARSDDEVQQT_					0	0	0			REV__ENSG00000130584|ENST00000245663|ZBTB46	REV__ENSG00000130584|ENST00000245663|ZBTB46	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.5230895876884	3	412.521467	1234.54257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.158	1	29.933	29.433	30.433	1.7754								0	0	0	0.63775	1	11788	11788		0.40827	0	1		+		30573	9790	15161	15222	35339	35339					-0.06531668823208747
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1781799197197	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.556	1	81.807	81.307	82.307	1.2512								0	0	0	1.0178	1	33814	33814		1.4819	0	1		+		30574	9984	15162	15223	35340	35340					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1782714724541	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.656	1	81.889	81.389	82.389	1.2332								0	0	0	1.0178	1	33856	33856		1.4819	0	1		+		30575	9984	15162	15223	35341	35341					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1782104372978	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.776	1	82.009	81.509	82.509	1.2332								0	0	0	1.0178	1	33909	33909		1.4819	0	1		+		30576	9984	15162	15223	35342	35342					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1784850955009	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.901	1	82.134	81.634	82.634	1.2332								0	0	0	1.0178	1	33963	33963		1.4819	0	1		+		30577	9984	15162	15223	35343	35343					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1784850955009	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.059	1	82.293	81.793	82.793	1.2332								0	0	0	1.0178	1	34030	34030		1.4819	0	1		+		30578	9984	15162	15223	35344	35344					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1774169802666	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.01	1	114.16	113.66	114.66	0.14912								0	0	0	1.0178	1	49340	49340		0.35063	0	1		+		30579	9984	15162	15223	35345	35345					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1778442263603	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.85	1	115	114.5	115.5	0.14976								0	0	0	1.0178	1	49679	49679		0.35063	0	1		+		30580	9984	15162	15223	35346	35346					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1779662966728	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.12	1	115.27	114.77	115.77	0.14976								0	0	0	1.0178	1	49786	49786		0.35063	0	1		+		30581	9984	15162	15223	35347	35347					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1778442263603	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.08	1	116.23	115.73	116.73	0.15228								0	0	0	1.0178	1	50174	50174		0.35063	0	1		+		30582	9984	15162	15223	35348	35348					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1776306033134	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.2	1	116.35	115.85	116.85	0.15228								0	0	0	1.0178	1	50224	50224		0.35063	0	1		+		30583	9984	15162	15223	35349	35349					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1772949099541	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.4	1	116.56	116.06	117.06	0.15228								0	0	0	1.0178	1	50306	50306		0.35063	0	1		+		30584	9984	15162	15223	35350	35350					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1779052615166	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.53	1	116.68	116.18	117.18	0.15228								0	0	0	1.0178	1	50357	50357		0.35063	0	1		+		30585	9984	15162	15223	35351	35351					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1779662966728	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.69	1	116.84	116.34	117.34	0.15228								0	0	0	1.0178	1	50423	50423		0.35063	0	1		+		30586	9984	15162	15223	35352	35352					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1777526736259	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.01	1	117.17	116.67	117.67	0.15606								0	0	0	1.0178	1	50553	50553		0.35063	0	1		+		30587	9984	15162	15223	35353	35353					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1777221560478	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.3	1	117.46	116.96	117.96	0.15606								0	0	0	1.0178	1	50671	50671		0.35063	0	1		+		30588	9984	15162	15223	35354	35354					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1784240603447	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.13	1	118.3	117.8	118.8	0.16237								0	0	0	1.0178	1	51008	51008		0.35063	0	1		+		30589	9984	15162	15223	35355	35355					0.03720472794850593
SARSNRRP	8	Unmodified	_SARSNRRP_					0	0	0			REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1773864626884	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.65	1	119.82	119.32	120.32	0.16584								0	0	0	1.0178	1	51619	51619		0.35063	0	1		+		30590	9984	15162	15223	35356	35356					0.03720472794850593
SARVKKKR	8	Unmodified	_SARVKKKR_					0	0	0			REV__ENSG00000146278|ENST00000336032|PNRC1	REV__ENSG00000146278|ENST00000336032|PNRC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8268920779228	2	486.824892	971.635232	3.2282	0.0015716	0.20965	0.00010206	3.4379	0.0016736	486.82531020300115	107.66	0.23687	107.82	107.68	107.92	0.15781					52	12	5	0	0	0	0.89181	1	46309	46309		0.6015	0	1	6527799999.999999	+		30591	10299	15163	15224	35357	35357					0.14827970282181013
SARYIRLRLQR	11	Unmodified	_SARYIRLRLQR_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:7043201-7117719:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.1974365115166	3	477.960026	1430.85825	2.8383	0.0013566	-1.3118	-0.000627	1.5265	0.00072961	478.29412781265523	85.18	1.139	85.18	84.558	85.697	0					60	35	2	0	0	0	0.14606	1	35678	35678		0.40827	0	1	1393800			30592	1364	15164	15225	35358	35358					0.16005419276575594
SARYIRLRLQR	11	Unmodified	_SARYIRLRLQR_					0	0	0		ENSG00000101680|ENST00000389658|LAMA1;ENST00000579014.5_1_18:7043201-7117719:-|nuORF	ENSG00000101680|ENST00000389658|LAMA1	ENSG00000101680|ENST00000389658|LAMA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	478.1979553103447	3	477.960026	1430.85825	1.8411	0.00087996	-0.78628	-0.00037581	1.0548	0.00050415	477.95916590305774	84.341	0.49449	85.5	85.224	85.719	1.159					23	15	2	0	0	0	0.14606	1	35402	35402		0.40827	0	1	1402000			30593	1364	15164	15225	35359	35359					0.16005419276575594
SASRLMRRHKR	11	Unmodified	_SASRLMRRHKR_					0	0	0		ENST00000478247.1_1_3:183882805-183888540:+|nuORF;nc|ENSG00000161202|Q92997-2|DVL3;ENSG00000161202|ENST00000313143|DVL3	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	699.4070922732353	2	699.404578	1396.7946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.13	1	28.877	28.377	29.377	1.747								0	0	0	0.63775	1	11354	11354		2.4985	1.169	1				30594	3590	15165	15226	35360	35360					0.1120773556781387
SASRLQMIL	9	Unmodified	_SASRLQMIL_					0	0	0		nc|ENSG00000115970|Q6YHU6-3|THADA;THADA|p.R1942Ifs*6|1|0.05|ENSG00000115970|chr2:43230985-43230986|-/CTGGGGGA|frameshift_variant;ENSG00000115970|ENST00000405975|THADA;ENST00000408045.7_1_2:43571220-43805671:-|nuORF;nc|ENSG00000115970|Q6YHU6-2|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	nc|ENSG00000115970|Q6YHU6-3|THADA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7890807986259	2	509.789327	1017.5641	2.9316	0.0014945	-0.27037	-0.00013783	2.6613	0.0013567	509.78920626648136	44.613	0.31437	45.978	45.804	46.118	1.3653					22	9	3	0	0	0	0.21592	1	18682	18682		31.268	5.869	1	2651900			30595	1943	15166	15227	35361	35361					0.05602089462490767
SATCVECHR	9	Unmodified	_SATCVECHR_					0	0	0		ENST00000329082.11_1_15:93586695-93586767:-|nuORF	ENST00000329082.11_1_15:93586695-93586767:-|nuORF	ENST00000329082.11_1_15:93586695-93586767:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2180053591728	2	503.215669	1004.41678	2.7951	0.0014065	1.1904	0.00059903	3.9855	0.0020056	503.21626052275246	78.402	0.48699	79.669	79.392	79.879	1.2668					70	15	6	0	0	0	0.70108	1	32904	32904		7.2892	1.5288	1	18170000			30596	5883	15167	15228	35362	35362					-0.08524750413960192
SATELMNIL	9	Unmodified	_SATELMNIL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000126247|ENST00000246533|CAPNS1	CAPNS1-PRPF6|1|fusion	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2606078982353	2	496.260068	990.505582	2.1331	0.0010586	0.89626	0.00044478	3.0293	0.0015033	496.2599403726341	72.096	0.44011	73.437	73.184	73.624	1.3415					28	13	3	0	0	0	0.11478	2	30241	30241;30297		44.407	22.66	1	2861100			30597	117	15168	15229	35363;35364	35363					0.009949880973749714
SATELMNIL	9	Unmodified	_SATELMNIL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000126247|ENST00000246533|CAPNS1	CAPNS1-PRPF6|1|fusion	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	991.5140869021416	1	991.512859	990.505582	3.7235	0.0036919	-2.3654	-0.0023453	1.3581	0.0013466	991.5098523003483	72.109	0.34446	73.451	73.279	73.624	1.3415					20	10	2	0	0	0	0.023786	2	30295	30244;30295		96.285	28.204	1	2963900			30598	117	15168	15229	35365;35366	35366					0.009949880973749714
SATELMNIL	9	Unmodified	_SATELMNIL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000126247|ENST00000246533|CAPNS1	CAPNS1-PRPF6|1|fusion	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	991.5089599490166	1	991.512859	990.505582	2.6076	0.0025854	-2.3384	-0.0023185	0.2692	0.00026692	991.509737005842	71.634	0.37939	73.458	73.286	73.665	1.8239					22	11	3	0	0	0	0.029093	2	30022	30022;30071		88.904	27.546	1	2084900			30599	117	15168	15229	35367;35368	35367					0.009949880973749714
SATELMNIL	9	Unmodified	_SATELMNIL_					0	0	0		CAPNS1-PRPF6|1|fusion;ENSG00000126247|ENST00000246533|CAPNS1	CAPNS1-PRPF6|1|fusion	CAPNS1-PRPF6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2607299685478	2	496.260068	990.505582	2.0451	0.0010149	-1.3284	-0.00065924	0.71671	0.00035567	496.2595513931681	71.573	0.34798	73.397	73.286	73.634	1.824					24	10	3	0	0	0	0.018723	2	30031	30031;30082		100.37	48.103	1	3564700			30600	117	15168	15229	35369;35370	35369					0.009949880973749714
SATQDFLAPL	10	Unmodified	_SATQDFLAPL_					0	0	0			REV__ENSG00000275023|ENST00000621332|MLLT6	REV__ENSG00000275023|ENST00000621332|MLLT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7795898318291	2	531.776939	1061.53933	2.1478	0.0011421	3.2743	0.0017412	5.4221	0.0028833	531.7783841946416	69.348	0.49765	70.714	70.472	70.969	1.3657					53	16	4	0	0	0	0.76954	1	29070	29070		15.248	0.66679	1	8913500	+		30601	12015	15169	15230	35371	35371					0.011017328607522359
SAVDFIRTL	9	Unmodified	_SAVDFIRTL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2892639040947	2	511.287474	1020.5604	2.8092	0.0014363	1.0154	0.00051915	3.8246	0.0019555	511.2880044132475	59.324	0.58612	60.744	60.467	61.053	1.4196					48	18	3	0	0	0	0.025926	2	24934	24897;24934		93.938	42.308	1	58265000			30602	3782	15170	15231	35372;35373	35373					0.050937429602981865
SAVDFIRTL	9	Unmodified	_SAVDFIRTL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2895385622978	2	511.287474	1020.5604	2.6761	0.0013683	0.60228	0.00030794	3.2784	0.0016762	511.2878318379759	58.831	0.61193	60.8	60.487	61.099	1.969					47	19	3	0	0	0	0.0070766	2	24700	24700;24737		114.19	45.082	1	55101000			30603	3782	15170	15231	35374;35375	35374					0.050937429602981865
SAVDLPVTL	9	Unmodified	_SAVDLPVTL_					0	0	0		ENST00000556782.5_1_14:45553435-45564778:+|nuORF;ENSG00000185246|ENST00000355765|PRPF39	ENST00000556782.5_1_14:45553435-45564778:+|nuORF	ENST00000556782.5_1_14:45553435-45564778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	914.5211669802666	1	914.519325	913.512048	1.5578	0.0014246	0.45742	0.00041832	2.0152	0.0018429	914.5194841487862	66.863	0.2215	68.251	68.121	68.343	1.3888					12	6	2	0	0	0	0.091139	1	28049	28049		52.268	3.9225	1	664100			30604	4736	15171	15232	35376	35376					0.05183249320384675
SAVDLPVTL	9	Unmodified	_SAVDLPVTL_					0	0	0		ENST00000556782.5_1_14:45553435-45564778:+|nuORF;ENSG00000185246|ENST00000355765|PRPF39	ENST00000556782.5_1_14:45553435-45564778:+|nuORF	ENST00000556782.5_1_14:45553435-45564778:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	914.519325	913.512048	1.5641	0.0014304	0.38725	0.00035414	1.9514	0.0017846	914.5195393842496	66.381	0.22345	68.27	68.15	68.373	1.8889	0.0092623	-2.3663E-05	NaN	52.268	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	559820			30605	4736	15171	15232							0.05183249320384675
SAVGHVFSL	9	Unmodified	_SAVGHVFSL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1731750369072	2	458.747985	915.481417	1.9859	0.00091101	-1.0656	-0.00048883	0.92028	0.00042218	458.74827880674087	41.933	0.34736	43.854	43.633	43.98	1.9211					22	10	3	0	0	0	0.11518	1	17517	17517		7.2892	5.2295	1	2531900			30606	3807	15172	15233	35377	35377					0.020295157259852203
SAVIGSVLTTI	11	Unmodified	_SAVIGSVLTTI_					0	0	0		FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant;FAT4|p.D3244Lfs*13|1|0.23|ENSG00000196159|chr4:125450744-125450745|-/ACTTACTGTTTCGGCAA|frameshift_variant;nc|ENSG00000196159|Q6V0I7-3|FAT4;nc|ENSG00000196159|Q6V0I7|FAT4;ENSG00000196159|ENST00000394329|FAT4	FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant	FAT4|p.I3243Efs*10|1|0.29|ENSG00000196159|chr4:125450742-125450743|-/GAAAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8182250857353	2	530.816064	1059.61758	1.9511	0.0010357	-2.8861	-0.001532	-0.93504	-0.00049633	530.8145629135761	68.579	2.293	70.432	69.441	71.734	1.853					224	73	6	0	0	0	0.84637	1	28959	28959		13.042	2.2185	1	13483000			30607	4918	15173	15234	35378	35378					0.09015165445998718
SAVNTYKY	8	Unmodified	_SAVNTYKY_					0	0	0		nc|ENSG00000166016|Q8N961-2|ABTB2;ENSG00000166016|ENST00000435224|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	nc|ENSG00000166016|Q8N961-2|ABTB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2383911013603	2	473.23745	944.460347	0.5444	0.00025763	0.49511	0.00023431	1.0395	0.00049194	473.23749825025266	16.532	0.3022	17.834	17.668	17.97	1.3023					18	9	3	0	0	0	0.88587	1	6914	6914		5.2307	0.47466	1	1733500			30608	3877	15174	15235	35379	35379					-0.014104943735219422
SAVPFKILY	9	Unmodified	_SAVPFKILY_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3060180544853	2	519.305136	1036.59572	2.1289	0.0011055	-1.3655	-0.00070913	0.76333	0.0003964	519.3044690751271	58.951	0.51684	60.37	60.1	60.617	1.4196					57	16	4	0	0	0	0.10473	3	24652	24652;24701;24753		47.749	17.112	1	85673000			30609	3010	15175	15236	35380;35381;35382	35380					0.07888405488097305
SAVPFKILY	9	Unmodified	_SAVPFKILY_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3072997927666	2	519.305136	1036.59572	1.6588	0.00086141	-0.64972	-0.0003374	1.009	0.000524	519.3048585733334	58.403	0.57869	60.372	60.084	60.663	1.969					62	18	5	0	0	0	0.070055	4	24444	24444;24491;24542;24602		60.074	18.234	1	71447000			30610	3010	15175	15236	35383;35384;35385;35386	35383					0.07888405488097305
SAVSIFHEL	9	Unmodified	_SAVSIFHEL_					0	0	0		ENST00000431648.8_2_18:14189184-14208232:+|nuORF;ENST00000451663.5_1_21:15313179-15342301:-|nuORF;nc|ENSG00000291287|Q5SQ80|ANKRD20A2P;nc|ENSG00000276203|Q5VUR7|ANKRD20A3P;nc|ENSG00000229089|Q5CZ79|ANKRD20A8P;nc|ENSG00000172014|Q4UJ75|ANKRD20A4P;ENST00000432432.6_1_2:95480778-95522914:-|nuORF;ENSG00000260691|ENST00000562196|ANKRD20A1	ENST00000431648.8_2_18:14189184-14208232:+|nuORF	ENST00000431648.8_2_18:14189184-14208232:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7665588259697	2	501.766374	1001.5182	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.87	1	53.842	53.342	54.342	1.9722								0	0	0	0.13855	1	21736	21736		30.637	5.2372	1				30611	5419	15176	15237	35387	35387					0.01749767551905279
SAVSSYRGPE	10	Unmodified	_SAVSSYRGPE_					0	0	0		ENST00000470238.1_1_1:169838129-169857981:-|nuORF	ENST00000470238.1_1_1:169838129-169857981:-|nuORF	ENST00000470238.1_1_1:169838129-169857981:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.7538940310478	2	526.753995	1051.49344	0.82458	0.00043435	0.13264	6.987E-05	0.95722	0.00050422	526.7541415660236	17.004	0.56348	17.004	16.722	17.285	0					35	17	3	0	0	0	0.78468	1	7108	7108		13.906	1.3745	1	589570			30612	6732	15177	15238	35388	35388					-0.030249123214616702
SAVVNWTSY	9	Unmodified	_SAVVNWTSY_					0	0	0		ENSG00000112299|ENST00000367928|VNN1	ENSG00000112299|ENST00000367928|VNN1	ENSG00000112299|ENST00000367928|VNN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7462036013603	2	513.748182	1025.48181	0.67451	0.00034653	-1.8719	-0.00096169	-1.1974	-0.00061516	513.7473371379857	9.8606	1.8933	9.8606	9.496	11.389	0					114	62	3	0	0	0	0.68551	1	3995	3995		7.9102	1.187	1	2009400			30613	1778	15178	15239	35389	35389					-0.029911093447935855
SAWMNGEDR	9	Unmodified	_SAWMNGEDR_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.5878784060478	2	533.224548	1064.43454	0.81247	0.00043323	0.19719	0.00010515	1.0097	0.00053838	533.2253165655981	19.683	0.84075	19.683	19.416	20.257	0					37	26	2	0	0	0	0.11749	1	8239	8239		3.5965	0	1	709900			30614	1021	15179	15240	35390	35390					-0.09509711887471894
SAWMNGEDR	9	Unmodified	_SAWMNGEDR_					0	0	0		ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	533.224548	1064.43454	0.64784	0.00034545	-0.7276	-0.00038797	-0.079756	-4.2528E-05	533.7241294553392	19.382	0.18184	19.575	19.502	19.684	0.19342	-0.054029	-0.00086325	NaN	3.5965	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	318470			30615	1021	15179	15240							-0.09509711887471894
SAYAQIVQF	9	Unmodified	_SAYAQIVQF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7662841677666	2	513.766374	1025.5182	0.92676	0.00047614	-0.10366	-5.3255E-05	0.82311	0.00042289	513.7660052339392	58.162	0.4253	59.58	59.39	59.815	1.4181					40	15	3	0	0	0	0.01454	4	24379	24340;24379;24427;24467		103.75	57.727	1	43185000			30616	2957	15180	15241	35391;35392;35393;35394	35392					0.0064576755189591495
SAYAQIVQF	9	Unmodified	_SAYAQIVQF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1026.526171863079	1	1026.52547	1025.5182	0.012785	1.3124E-05	2.4327	0.0024973	2.4455	0.0025104	1026.5251443032614	58.209	0.29077	59.627	59.462	59.752	1.4181					18	9	3	0	0	0	0.0058174	2	24416	24362;24416		118.89	75.036	1	4637900			30617	2957	15180	15241	35395;35396	35396					0.0064576755189591495
SAYAQIVQF	9	Unmodified	_SAYAQIVQF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7676879763603	2	513.766374	1025.5182	0.66875	0.00034358	-0.096419	-4.9537E-05	0.57233	0.00029405	513.7657066168658	57.676	0.3673	59.645	59.447	59.814	1.969					57	16	5	0	0	0	0.0092758	4	24134	24134;24172;24212;24264		108	65.774	1	50463000			30618	2957	15180	15241	35397;35398;35399;35400	35397					0.0064576755189591495
SAYAQIVQF	9	Unmodified	_SAYAQIVQF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1026.522631824017	1	1026.52547	1025.5182	0.6638	0.0006814	-1.5381	-0.0015789	-0.87426	-0.00089745	1026.5235127851524	57.633	0.2299	59.602	59.499	59.729	1.969					15	9	2	0	0	0	0.01454	1	24198	24198		103.75	63.791	1	5502800			30619	2957	15180	15241	35401	35401					0.0064576755189591495
SAYEFVTW	8	Unmodified	_SAYEFVTW_					0	0	0		ENST00000593636.1_1_19:50321571-50322554:+|nuORF;MED25|p.M131Sfs*83|1|0.23|ENSG00000104973|chr19:49828535-49828535|T/-|frameshift_variant;MED25|p.D529Rfs*67|1|0.03|ENSG00000104973|chr19:49835087-49835090|CGAC/-|frameshift_variant;nc|ENSG00000104973|Q71SY5-5|MED25;ENSG00000104973|ENST00000312865|MED25;nc|ENSG00000104973|Q71SY5-4|MED25	ENST00000593636.1_1_19:50321571-50322554:+|nuORF	ENST00000593636.1_1_19:50321571-50322554:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.8247253298759	3	334.823759	1001.44945	0.70573	0.0002363	3.1605	0.0010582	3.8662	0.0012945	334.82473029164555	80.294	0.47274	82.011	81.789	82.261	1.7167					40	15	4	0	0	0	0.83505	2	33649	33649;33702		18.146	3.741	1	5705800			30620	1494	15181	15242	35402;35403	35402					-0.05121896747812116
SAYFAEKLY	9	Unmodified	_SAYFAEKLY_					0	0	0		ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4;ENSG00000196975|ENST00000394295|ANXA4	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2760497927666	2	546.274032	1090.53351	2.1524	0.0011758	-0.63286	-0.00034571	1.5195	0.00083008	546.2735727987534	40.447	0.36699	41.757	41.514	41.881	1.3102					21	11	3	0	0	0	0.15456	1	16968	16968		38.176	15.027	1	1112200			30621	4973	15182	15243	35404	35404					-0.008133656509016873
SAYFAEKLY	9	Unmodified	_SAYFAEKLY_					0	0	0		ENST00000471395.1_1_2:70045687-70052644:+|nuORF;ENST00000477632.5_1_2:70037634-70052644:+|nuORF;nc|ENSG00000196975|P09525-2|ANXA4;nc|ENSG00000196975|P09525|ANXA4;ENSG00000196975|ENST00000394295|ANXA4	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	ENST00000471395.1_1_2:70045687-70052644:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2751953005791	2	546.274032	1090.53351	1.9036	0.0010399	0.22589	0.0001234	2.1295	0.0011633	546.274208473927	40.081	0.40592	41.944	41.677	42.083	1.8624					22	12	3	0	0	0	0.099302	1	16811	16811		49.554	18.918	1	1631600			30622	4973	15182	15243	35405	35405					-0.008133656509016873
SAYFGKEEFPK	11	Unmodified	_SAYFGKEEFPK_					0	0	0			REV__ENST00000397042.7_1_20:37203820-37203961:+|nuORF	REV__ENST00000397042.7_1_20:37203820-37203961:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8821288943291	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.058	1	10.802	10.302	11.302	0.74462								0	0	0	0.63775	1	4186	4186		4.4062	1.7749	1		+		30623	12860	15183	15244	35406	35406					-0.009546375306854316
SAYGSVKAY	9	Unmodified	_SAYGSVKAY_					0	0	0		ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000231991|A6NMY6|ANXA2P2;ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2	ENST00000557937.5_1_15:60655071-60678274:-|nuORF	ENST00000557937.5_1_15:60655071-60678274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2382385134697	2	473.23745	944.460347	0.53574	0.00025353	0.17491	8.2773E-05	0.71064	0.0003363	473.2376127041382	16.771	0.24811	17.669	17.538	17.786	0.89794					18	8	3	0	0	0	0.093059	1	6973	6973		51.63	5.9302	1	2121800			30624	4622	15184	15245	35407	35407					-0.014104943735219422
SAYGSVKAY	9	Unmodified	_SAYGSVKAY_					0	0	0		ENST00000557937.5_1_15:60655071-60678274:-|nuORF;nc|ENSG00000231991|A6NMY6|ANXA2P2;ENSG00000182718|ENST00000451270|ANXA2;nc|ENSG00000182718|P07355-2|ANXA2	ENST00000557937.5_1_15:60655071-60678274:-|nuORF	ENST00000557937.5_1_15:60655071-60678274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2370483279228	2	473.23745	944.460347	0.5444	0.00025763	0.49511	0.00023431	1.0395	0.00049194	473.23749825025266	16.532	0.3022	17.834	17.668	17.97	1.3023					18	9	3	0	0	0	0.10473	1	6859	6859		47.749	5.9091	1	1733500			30625	4622	15184	15245	35408	35408					-0.014104943735219422
SAYNYLTFI	9	Unmodified	_SAYNYLTFI_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2740356326103	2	546.274032	1090.53351	1.9036	0.0010399	0.22589	0.0001234	2.1295	0.0011633	546.274208473927	40.081	0.40592	41.944	41.677	42.083	1.8624					22	12	3	0	0	0	0.68551	1	16763	16763		7.9102	0	1	1631600	+		30626	10281	15185	15246	35409	35409					-0.008133656509016873
SAYPLSVEW	9	Unmodified	_SAYPLSVEW_					0	0	0		ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	ENSG00000136045|ENST00000412830|PWP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1051.512866199017	1	1051.50949	1050.50221	2.005	0.0021083	-0.59251	-0.00062303	1.4125	0.0014853	1051.5101028645638	67.594	0.30685	68.972	68.789	69.096	1.3778					16	9	2	0	0	0	0.026836	1	28364	28364		92.491	52.534	1	1644900			30627	2703	15186	15247	35410	35410					-0.021019386850184674
SCCCCCCC	8	Unmodified	_SCCCCCCC_					0	0	0		nc|ENSG00000231721|A0A455ZAR2|LINC-PINT;ENST00000451786.5_1_7:130792823-130793084:-|nuORF	REV__nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	REV__nc|ENSG00000231721|A0A455ZAR2|LINC-PINT	MSMS	GG20161007_CRH_Patient100_A02_02	2	414.0612365603447	2	414.060719	826.106884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.739	1	25.991	25.491	26.491	0.25197								0	0	0	1.0178	1	10748	10748		0	0	1				30628	6613	15187	15248	35411	35411					-0.31312472604292907
SCCCCWCLCC	10	Unmodified	_SCCCCWCLCC_					0	0	0			REV__RGS19|p.P38H|1|0.36|ENSG00000171700|chr20:64076564-64076564|G/T|missense_variant	REV__RGS19|p.P38H|1|0.36|ENSG00000171700|chr20:64076564-64076564|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.0969116091728	3	376.097364	1125.27026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.292	1	56.292	55.792	56.792	0								0	0	0	0.66264	1	23465	23465		0	0	1		+		30629	11040	15188	15249	35412	35412					-0.28736294553254993
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.0999633669853	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.971	1	28.243	27.743	28.743	0.27119								0	0	0	1.0178	1	11698	11698		0	0	1				30630	7574	15189	15250	35413	35413					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.0999633669853	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.653	1	37.958	37.458	38.458	0.30497								0	0	0	1.0178	1	15837	15837		0	0	1				30631	7574	15189	15250	35414	35414					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1034118533134	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.64	1	57.963	57.463	58.463	0.32298								0	0	0	1.0178	1	24168	24168		0	0	1				30632	7574	15189	15250	35415	35415					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1017028689384	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.885	1	58.208	57.708	58.708	0.32298								0	0	0	1.0178	1	24267	24267		0	0	1				30633	7574	15189	15250	35416	35416					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1013061404228	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.168	1	58.491	57.991	58.991	0.32298								0	0	0	1.0178	1	24382	24382		0	0	1				30634	7574	15189	15250	35417	35417					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1002075076103	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.095	1	60.424	59.924	60.924	0.32809								0	0	0	1.0178	1	25186	25186		0	0	1				30635	7574	15189	15250	35418	35418					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.0995971560478	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.035	1	26.295	25.795	26.795	1.2594								0	0	0	1.0178	1	10480	10480		0	0	1				30636	7574	15189	15250	35419	35419					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.0999633669853	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.63	1	40.94	40.44	41.44	1.3102								0	0	0	1.0178	1	16622	16622		0	0	1				30637	7574	15189	15250	35420	35420					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1009704470634	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.187	1	86.346	85.846	86.846	1.159								0	0	0	1.0178	1	35747	35747		0	0	1				30638	7574	15189	15250	35421	35421					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1009094119072	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.552	1	89.608	89.108	90.108	1.0562								0	0	0	1.0178	1	37333	37333		0	0	1				30639	7574	15189	15250	35422	35422					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1007873415947	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.152	1	93.089	92.589	93.589	0.93623								0	0	0	1.0178	1	38811	38811		0	0	1				30640	7574	15189	15250	35423	35423					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1011535525322	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.005	1	93.876	93.376	94.376	0.87176								0	0	0	1.0178	1	39150	39150		0	0	1				30641	7574	15189	15250	35424	35424					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.0996887087822	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.03	1	38.848	38.348	39.348	1.8176								0	0	0	1.0178	1	15538	15538		0	0	1				30642	7574	15189	15250	35425	35425					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.0998412966728	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.72	1	40.557	40.057	41.057	1.8366								0	0	0	1.0178	1	16239	16239		0	0	1				30643	7574	15189	15250	35426	35426					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1012145876884	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.022	1	40.859	40.359	41.359	1.8366								0	0	0	1.0178	1	16361	16361		0	0	1				30644	7574	15189	15250	35427	35427					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1012145876884	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.422	1	41.258	40.758	41.758	1.8366								0	0	0	1.0178	1	16527	16527		0	0	1				30645	7574	15189	15250	35428	35428					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1013366580009	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.581	1	41.443	40.943	41.943	1.8624								0	0	0	1.0178	1	16594	16594		0	0	1				30646	7574	15189	15250	35429	35429					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.0997497439384	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.687	1	41.549	41.049	42.049	1.8624								0	0	0	1.0178	1	16640	16640		0	0	1				30647	7574	15189	15250	35430	35430					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1015502810478	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.129	1	41.991	41.491	42.491	1.8624								0	0	0	1.0178	1	16825	16825		0	0	1				30648	7574	15189	15250	35431	35431					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.1003906130791	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.381	1	42.243	41.743	42.743	1.8624								0	0	0	1.0178	1	16928	16928		0	0	1				30649	7574	15189	15250	35432	35432					-0.19765837711690892
SCCGCATC	8	Unmodified	_SCCGCATC_					0	0	0		ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	ENST00000609502.1_1_10:42863294-42863384:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.0995056033134	2	374.10007	746.185587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.15	1	110.3	109.8	110.8	0.15228								0	0	0	1.0178	1	47779	47779		0	0	1				30650	7574	15189	15250	35433	35433					-0.19765837711690892
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1064025759697	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.22908	1	0.38752	-0.11248	0.88752	0.15844								0	0	0	0.42693	1	94	94		0	0	1				30651	3274	15190	15251	35434	35434					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1068908572197	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.37323	1	0.53167	0.031668	1.0317	0.15844								0	0	0	0.42693	1	153	153		0	0	1				30652	3274	15190	15251	35435	35435					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065856814384	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.63924	1	0.79768	0.29768	1.2977	0.15844								0	0	0	0.42693	1	263	263		0	0	1				30653	3274	15190	15251	35436	35436					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1067382693291	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.7434	1	0.90184	0.40184	1.4018	0.15844								0	0	0	0.42693	1	306	306		0	0	1				30654	3274	15190	15251	35437	35437					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065856814384	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.8841	1	1.0311	0.53113	1.5311	0.14703								0	0	0	0.42693	1	363	363		0	0	1				30655	3274	15190	15251	35438	35438					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1066467165947	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0028	1	1.1498	0.6498	1.6498	0.14703								0	0	0	0.42693	1	413	413		0	0	1				30656	3274	15190	15251	35439	35439					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1068908572197	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2498	1	1.3969	0.89685	1.8969	0.14703								0	0	0	0.42693	1	516	516		0	0	1				30657	3274	15190	15251	35440	35440					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1067382693291	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3813	1	1.5283	1.0283	2.0283	0.14703								0	0	0	0.42693	1	570	570		0	0	1				30658	3274	15190	15251	35441	35441					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1070129275322	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.927	1	20.12	19.62	20.62	0.19342								0	0	0	0.42693	1	8280	8280		0	0	1				30659	3274	15190	15251	35442	35442					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1068603396416	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.26	1	20.471	19.971	20.971	0.21024								0	0	0	0.42693	1	8417	8417		0	0	1				30660	3274	15190	15251	35443	35443					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065856814384	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.402	1	20.613	20.113	21.113	0.21024								0	0	0	0.42693	1	8475	8475		0	0	1				30661	3274	15190	15251	35444	35444					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1075622439384	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.61	1	20.82	20.32	21.32	0.21024								0	0	0	0.42693	1	8560	8560		0	0	1				30662	3274	15190	15251	35445	35445					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1065246462822	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.774	1	20.984	20.484	21.484	0.21024								0	0	0	0.42693	1	8628	8628		0	0	1				30663	3274	15190	15251	35446	35446					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1062805056572	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.58	1	9.2165	8.7165	9.7165	0.63651								0	0	0	0.42693	1	3561	3561		0	0	1				30664	3274	15190	15251	35447	35447					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1068298220634	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1389	1	9.7754	9.2754	10.275	0.63651								0	0	0	0.42693	1	3796	3796		0	0	1				30665	3274	15190	15251	35448	35448					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1069213747978	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3506	1	2.099	1.599	2.599	0.7484								0	0	0	0.42693	1	559	559		0	0	1				30666	3274	15190	15251	35449	35449					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1065246462822	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1851	1	4.9303	4.4303	5.4303	0.74525								0	0	0	0.42693	1	1733	1733		0	0	1				30667	3274	15190	15251	35450	35450					-0.20044110660944625
SCCPMCPEM	9	Unmodified	_SCCPMCPEM_					0	0	0		ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	ENSG00000150938|ENST00000280527|CRIM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1064330935478	3	334.107022	999.299237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3984	1	8.1291	7.6291	8.6291	0.73074								0	0	0	0.42693	1	3073	3073		0	0	1				30668	3274	15190	15251	35451	35451					-0.20044110660944625
SCCSPEPDRTF	11	Unmodified	_SCCSPEPDRTF_					0	0	0		chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.5020324587822	3	414.502362	1240.48526	0.11672	4.8381E-05	-1.1565	-0.00047936	-1.0397	-0.00043098	414.50195099189216	29.135	0.86217	29.135	28.87	29.732	0					81	27	4	0	0	0	0.85967	3	12187	12138;12187;12240		6.6235	2.6791	1	4199300			30669	188	15191	15252	35452;35453;35454	35453					-0.1253655062478174
SCCSPEPDRTF	11	Unmodified	_SCCSPEPDRTF_					0	0	0		chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	414.5023071169853	3	414.502362	1240.48526	1.2858	0.00053298	-2.5551	-0.0010591	-1.2693	-0.00052613	414.50143702144555	28.847	0.72839	29.127	28.831	29.559	0.2793					54	23	3	0	0	0	0.92747	1	12049	12049		4.1166	0.17223	1	2246300			30670	188	15191	15252	35455	35455					-0.1253655062478174
SCCSPEPDRTF	11	Unmodified	_SCCSPEPDRTF_					0	0	0		chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	chr11:66437443-66438782|125|25.96|0.13|7.62|-|0|MRPL11,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	414.502362	1240.48526	0.65664	0.00027218	-1.5463	-0.00064094	-0.88965	-0.00036876	414.5018265197491	27.292	0.43245	29.039	28.865	29.298	1.747	-0.053698	0.00035791	NaN	6.6235	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1017300			30671	188	15191	15252							-0.1253655062478174
SCECMSEYSDP	11	Unmodified	_SCECMSEYSDP_					0	0	0			REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.3552734255791	4	313.355708	1249.39373	-0.50131	-0.00015709	-1.1	-0.0003447	-1.6013	-0.00050179	313.35539606055386	12.707	0.49391	12.796	12.555	13.049	0.089381					28	15	3	0	0	0	1.0402	1	5275	5275		0.094841	0.011491	1	587620	+		30672	13493	15192	15253	35456	35456					-0.22099602104276528
SCECMSEYSDP	11	Unmodified	_SCECMSEYSDP_					0	0	0			REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	313.355708	1249.39373	-0.50131	-0.00015709	-1.1	-0.0003447	-1.6013	-0.00050179	313.35539606055386	12.707	0.49391	12.796	12.555	13.049	0.089381	-0.087779	0.0002927	NaN	0.094841	28	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	587620	+		30673	13493	15192	15253							-0.22099602104276528
SCECMSEYSDP	11	Unmodified	_SCECMSEYSDP_					0	0	0			REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	313.355708	1249.39373	-1.477	-0.00046282	-1.1515	-0.00036084	-2.6285	-0.00082366	313.35536427389775	12.302	0.41029	12.996	12.727	13.137	0.69396	0.11194	0.00022813	NaN	0.094841	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467940	+		30674	13493	15192	15253							-0.22099602104276528
SCECMSEYSDP	11	Unmodified	_SCECMSEYSDP_					0	0	0			REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	REV__ENST00000498611.5_1_22:50657800-50659866:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	313.355708	1249.39373	-0.5888	-0.0001845	-2.3372	-0.00073238	-2.926	-0.00091689	313.354848612519	12.073	0.22075	12.86	12.813	13.034	0.78751	-0.024165	-0.001258	NaN	0.094841	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	442250	+		30675	13493	15192	15253							-0.22099602104276528
SCILLPKH	8	Unmodified	_SCILLPKH_					0	0	0			REV__ENSG00000072422|ENST00000337910|RHOBTB1	REV__ENSG00000072422|ENST00000337910|RHOBTB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1750976443291	3	304.177479	909.510608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.45	1	81.45	80.95	81.95	0								0	0	0	1.0178	1	33919	33919		0.40072	0	1		+		30676	8737	15193	15254	35457	35457					0.05223336750623275
SCNDDSGDT	9	Unmodified	_SCNDDSGDT_					0	0	0			REV__ENSG00000235718|ENST00000619721|MFRP	REV__ENSG00000235718|ENST00000619721|MFRP	MSMS	GG20161007_CRH_Patient100_W632_02	4	305.0999938845634	3	305.099511	912.276705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.612	1	50.589	50.089	51.089	1.9772								0	0	0	0.42693	1	20362	20362		0.26902	0	1		+		30677	11904	15194	15255	35458	35458					-0.1829425593734868
SCNDDSGDT	9	Unmodified	_SCNDDSGDT_					0	0	0			REV__ENSG00000235718|ENST00000619721|MFRP	REV__ENSG00000235718|ENST00000619721|MFRP	MSMS	GG20161007_CRH_Patient100_W632_02	4	305.0998107790947	3	305.099511	912.276705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.845	1	50.823	50.323	51.323	1.9772								0	0	0	0.42693	1	20461	20461		0.26902	0	1		+		30678	11904	15194	15255	35459	35459					-0.1829425593734868
SCSESDDDDSS	11	Unmodified	_SCSESDDDDSS_					0	0	0		ENSG00000114857|ENST00000232978|NKTR;ENST00000508351.5_1_3:42675051-42676859:+|nuORF	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_W632_02	4	382.7841064333916	3	382.784029	1145.33026	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.61	1	58.578	58.078	59.078	1.9684								0	0	0	0.63775	1	23744	23744		0	0	1				30679	1885	15195	15256	35460	35460					-0.2365954801616681
SCTFCLNIFRV	11	Unmodified	_SCTFCLNIFRV_					0	0	0		ENSG00000182938|ENST00000328801|OTOP3;nc|ENSG00000182938|Q7RTS5|OTOP3	ENSG00000182938|ENST00000328801|OTOP3	ENSG00000182938|ENST00000328801|OTOP3	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8827087283134	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2923	1	9.9429	9.4429	10.443	0.65058								0	0	0	0.63775	1	3860	3860		0.094841	0.011491	1				30680	4634	15196	15257	35461	35461					-0.01269927180715058
SCTHPSNH	8	Unmodified	_SCTHPSNH_					0	0	0		ENST00000528379.1_1_11:82708357-82746391:-|nuORF;ENST00000533276.6_1_11:82708357-82782761:-|nuORF;ENST00000260056.6_1_11:82708357-82745471:-|nuORF	ENST00000528379.1_1_11:82708357-82746391:-|nuORF	ENST00000528379.1_1_11:82708357-82746391:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	882.3538085818291	1	882.352276	881.344999	1.1631	0.0010262	0.12256	0.00010814	1.2856	0.0011344	882.3517124096403	102.19	0.10606	102.19	102.13	102.23	0					5	3	2	0	0	0	0.89008	1	42817	42817		2.5775	0	1	4247600			30681	5613	15197	15258	35462	35462					-0.10041921776178242
SDDCSEMC	8	Unmodified	_SDDCSEMC_					0	0	0		nc|ENSG00000079263|Q13342-2|SP140;nc|ENSG00000079263|Q13342-3|SP140;nc|ENSG00000079263|Q13342-6|SP140;nc|ENSG00000079263|Q13342-5|SP140;ENSG00000079263|ENST00000392045|SP140	nc|ENSG00000079263|Q13342-2|SP140	nc|ENSG00000079263|Q13342-2|SP140	MSMS	GG20161007_CRH_Patient100_W632_02	4	445.1235534548759	2	445.122254	888.229954	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.18	1	100.38	99.881	100.88	0.20527								0	0	0	1.0178	1	42129	42129		0	0	1				30682	987	15198	15259	35463	35463					-0.2186315508449752
SDDDSSEDSD	10	Unmodified	_SDDDSSEDSD_					0	0	0			REV__nc|ENSG00000081237|P08575-4|PTPRC	REV__nc|ENSG00000081237|P08575-4|PTPRC	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.1658813357353	2	536.16527	1070.31599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.188	1	14.957	14.457	15.457	0.76937								0	0	0	0.66264	1	5894	5894		0	0	1		+		30683	8815	15199	15260	35464	35464					-0.21635877172775508
SDDECDNDGDC	11	Unmodified	_SDDECDNDGDC_					0	0	0			REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	594.1594726443291	2	594.158607	1186.30266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.099	1	66.099	65.599	66.599	0								0	0	0	0.63775	1	27539	27539		0	0	1		+		30684	9910	15200	15261	35465	35465					-0.28303774548021465
SDDECDNDGDC	11	Unmodified	_SDDECDNDGDC_					0	0	0			REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	REV__LRP4|p.S1504Lfs*116|1|0.16|ENSG00000134569|chr11:46873172-46873172|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	594.1594116091728	2	594.158607	1186.30266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.425	1	29.704	29.204	30.204	1.2789								0	0	0	0.63775	1	11917	11917		0	0	1		+		30685	9910	15200	15261	35466	35466					-0.28303774548021465
SDDEDEDH	8	Unmodified	_SDDEDEDH_					0	0	0			REV__ENSG00000075539|ENST00000358350|FRYL	REV__ENSG00000075539|ENST00000358350|FRYL	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.1537963747978	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6331	1	5.713	5.213	6.213	0.079923								0	0	0	1.0178	1	2328	2328		0.79363	0	1		+		30686	8763	15201	15262	35467	35467					-0.18727217410832964
SDDESRGK	8	Unmodified	_SDDESRGK_					0	0	0			REV__ENSG00000121281|ENST00000673801|ADCY7	REV__ENSG00000121281|ENST00000673801|ADCY7	MSMS	GG20161007_CRH_Patient100_A02_02	2	447.2049133181572	2	447.201596	892.388638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.23	104.73	105.73	0.056801								0	0	0	1.0178	1	44529	44529		2.5775	0	1		+		30687	9584	15202	15263	35468	35468					-0.06186033798030621
SDECETCH	8	Unmodified	_SDECETCH_					0	0	0			REV__ENSG00000131116|ENST00000300811|ZNF428	REV__ENSG00000131116|ENST00000300811|ZNF428	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1460143923759	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6512	1	3.6512	3.1512	4.1512	0								0	0	0	1.0178	1	1500	1500		0.79363	0	1		+		30688	9813	15203	15264	35469	35469					-0.18456704084201192
SDECETCH	8	Unmodified	_SDECETCH_					0	0	0			REV__ENSG00000131116|ENST00000300811|ZNF428	REV__ENSG00000131116|ENST00000300811|ZNF428	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1455566287041	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.922	1	20.922	20.422	21.422	0								0	0	0	1.0178	1	8698	8698		0.79363	0	1		+		30689	9813	15203	15264	35470	35470					-0.18456704084201192
SDECETCH	8	Unmodified	_SDECETCH_					0	0	0			REV__ENSG00000131116|ENST00000300811|ZNF428	REV__ENSG00000131116|ENST00000300811|ZNF428	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1458923220634	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.047	1	21.047	20.547	21.547	0								0	0	0	1.0178	1	8750	8750		0.79363	0	1		+		30690	9813	15203	15264	35471	35471					-0.18456704084201192
SDECETCH	8	Unmodified	_SDECETCH_					0	0	0			REV__ENSG00000131116|ENST00000300811|ZNF428	REV__ENSG00000131116|ENST00000300811|ZNF428	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1450683474541	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.056	1	17.954	17.454	18.454	0.89794								0	0	0	1.0178	1	7099	7099		0.79363	0	1		+		30691	9813	15203	15264	35472	35472					-0.18456704084201192
SDECETCH	8	Unmodified	_SDECETCH_					0	0	0			REV__ENSG00000131116|ENST00000300811|ZNF428	REV__ENSG00000131116|ENST00000300811|ZNF428	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1456481814384	2	462.147117	922.279682	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.18	1	18.078	17.578	18.578	0.89794								0	0	0	1.0178	1	7150	7150		0.79363	0	1		+		30692	9813	15203	15264	35473	35473					-0.18456704084201192
SDGEDGDDN	9	Unmodified	_SDGEDGDDN_					0	0	0		ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	ENSG00000010818|ENST00000367603|HIVEP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	462.1446105837822	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.047	1	67.37	66.87	67.87	0.32269								0	0	0	0.42693	1	28067	28067		0.45834	0.057624	1				30693	559	15204	15265	35474	35474					-0.18543503927890015
SDGKADRPH	9	Unmodified	_SDGKADRPH_					0	0	0		ENST00000540600.5_1_11:113285027-113346393:-|nuORF;nc|ENSG00000149295|P14416-2|DRD2;ENSG00000149295|ENST00000362072|DRD2;nc|ENSG00000149295|P14416-3|DRD2	ENST00000540600.5_1_11:113285027-113346393:-|nuORF	ENST00000540600.5_1_11:113285027-113346393:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1606933474541	3	328.161545	981.462806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5914	1	4.215	3.715	4.715	0.62362								0	0	0	0.42693	1	1483	1483		0.26902	0	1				30694	7215	15205	15266	35475	35475					-0.0286664591585577
SDGSVTVTIV	10	Unmodified	_SDGSVTVTIV_					0	0	0		ENSG00000011201|ENST00000262648|ANOS1	ENSG00000011201|ENST00000262648|ANOS1	ENSG00000011201|ENST00000262648|ANOS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	977.5168334841728	1	977.514967	976.507691	2.2541	0.0022034	1.3256	0.0012958	3.5796	0.0034992	977.516152320806	47.064	0.25514	49.04	48.87	49.125	1.976					11	7	2	0	0	0	0.6819	1	19687	19687		19.257	0	1	541810			30695	564	15206	15267	35476	35476					0.01849740106843001
SDGSVTVTIV	10	Unmodified	_SDGSVTVTIV_					0	0	0		ENSG00000011201|ENST00000262648|ANOS1	ENSG00000011201|ENST00000262648|ANOS1	ENSG00000011201|ENST00000262648|ANOS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	977.514967	976.507691	2.6305	0.0025714	0.29196	0.0002854	2.9225	0.0028568	977.5161467798326	47.489	0.29079	48.871	48.695	48.986	1.3825	-0.084334	-0.00048734	NaN	19.257	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	529490			30696	564	15206	15267							0.01849740106843001
SDIVLLDIP	9	Unmodified	_SDIVLLDIP_					0	0	0		tr|A0A553SQ32|A0A553SQ32_NIACIMalatedehydrogenaseOS=NialliacirculansOX=1397GN=mdhPE=3SV=1	tr|A0A553SQ32|A0A553SQ32_NIACIMalatedehydrogenaseOS=NialliacirculansOX=1397GN=mdhPE=3SV=1	tr|A0A553SQ32|A0A553SQ32_NIACIMalatedehydrogenaseOS=NialliacirculansOX=1397GN=mdhPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	984.5625488162041	1	984.561189	983.553913	2.1706	0.0021371	0.432	0.00042533	2.6026	0.0025624	984.5604640238848	61.282	0.21886	61.612	61.484	61.703	0.32974					9	6	2	0	0	0	0.37357	1	25678	25678		21.747	4.8044	1	315880			30697	16497	15207	15268	35477	35477					0.061478050089249336
SDKFYEALSSR	11	Unmodified	_SDKFYEALSSR_					0	0	0			REV__ENST00000533440.1_1_11:62562405-62563999:-|nuORF	REV__ENST00000533440.1_1_11:62562405-62563999:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8829528689384	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.017	1	31.3	30.8	31.8	1.2825								0	0	0	0.63775	1	12596	12596		2.084	0.17759	1		+		30698	10635	15208	15269	35478	35478					-0.013567270243811436
SDLKEFKWG	9	Unmodified	_SDLKEFKWG_					0	0	0			REV__ENSG00000101986|ENST00000218104|ABCD1	REV__ENSG00000101986|ENST00000218104|ABCD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2849609255791	2	555.284931	1108.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.255	1	30.537	30.037	31.037	1.2825								0	0	0	0.42693	1	12271	12271		1.6526	0.17072	1		+		30699	9054	15209	15270	35479	35479					0.005374390976612631
SDLVILPN	8	Unmodified	_SDLVILPN_					0	0	0			REV__tr|A0A7D7A5F1|A0A7D7A5F1_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05690PE=4SV=1	REV__tr|A0A7D7A5F1|A0A7D7A5F1_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7520629763603	2	435.750193	869.485833	2.3162	0.0010093	2.4835	0.0010822	4.7997	0.0020915	435.7511277312858	63.625	0.67478	63.954	63.598	64.273	0.32899					54	21	3	0	0	0	0.88587	1	26652	26652		5.2307	0	1	5760800	+		30700	15883	15210	15271	35480	35480					0.04586980148917519
SDNRLALR	8	Unmodified	_SDNRLALR_					0	0	0			REV__ENSG00000116996|ENST00000366570|ZP4	REV__ENSG00000116996|ENST00000366570|ZP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7679931521416	2	472.76724	943.519927	2.7522	0.0013011	-0.422	-0.00019951	2.3302	0.0011016	472.76691574659435	78.292	0.45394	79.559	79.363	79.817	1.2668					47	14	4	0	0	0	0.87935	1	32865	32865		9.3474	0	1	13883000	+		30701	9488	15211	15272	35481	35481					0.04590821360500286
SDPLRVNT	8	Unmodified	_SDPLRVNT_					0	0	0			REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1631042361259	3	301.162775	900.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.18	1	104.24	103.74	104.74	0.059502								0	0	0	1.0178	1	43883	43883		1.4819	0.41044	1		+		30702	13835	15212	15273	35482	35482					0.012280238579933211
SDPLRVNT	8	Unmodified	_SDPLRVNT_					0	0	0			REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1639587283134	3	301.162775	900.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.14	1	104.3	103.8	104.8	0.16055								0	0	0	1.0178	1	44058	44058		1.4819	0.41044	1		+		30703	13835	15212	15273	35483	35483					0.012280238579933211
SDPLRVNT	8	Unmodified	_SDPLRVNT_					0	0	0			REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	REV__ENST00000552030.5_1_12:109042755-109052582:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1636230349541	3	301.162775	900.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.27	103.77	104.77	0.1731								0	0	0	1.0178	1	43975	43975		1.4819	0	1		+		30704	13835	15212	15273	35484	35484					0.012280238579933211
SDPVEVIPV	9	Unmodified	_SDPVEVIPV_					0	0	0		ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	954.5184814333916	1	954.514239	953.506963	2.522	0.0024073	0.55983	0.00053436	3.0818	0.0029416	954.514964698338	87.585	0.93904	87.585	87.211	88.15	0					81	32	3	0	0	0	0.22519	5	36572	36527;36572;36670;36719;36773		30.225	6.2061	1	5632200			30705	7433	15213	15274	35485;35486;35487;35488;35489	35486					0.0283494545776648
SDPVEVIPV	9	Unmodified	_SDPVEVIPV_					0	0	0		ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	954.5169555544853	1	954.514239	953.506963	2.6173	0.0024983	0.35067	0.00033472	2.968	0.002833	954.5143073389232	87.115	0.83083	87.359	87.124	87.955	0.24387					63	29	3	0	0	0	0.1735	4	36542	36542;36594;36654;36700		36.044	7.5574	1	7535900			30706	7433	15213	15274	35490;35491;35492;35493	35490					0.0283494545776648
SDPVEVIPV	9	Unmodified	_SDPVEVIPV_					0	0	0		ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.5151855349541	1	954.514239	953.506963	2.5985	0.0024803	-0.59082	-0.00056395	2.0077	0.0019163	954.5143372690037	86.423	1.1718	87.55	86.816	87.987	1.1265					88	46	4	0	0	0	0.1735	7	36237	36145;36237;36289;36358;36416;36468;36577		36.044	7.5574	1	22208000			30707	7433	15213	15274	35494;35495;35496;35497;35498;35499;35500	35495					0.0283494545776648
SDPVEVIPV	9	Unmodified	_SDPVEVIPV_					0	0	0		ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.5183593630791	1	954.514239	953.506963	3.6049	0.003441	-2.2229	-0.0021217	1.3821	0.0013192	954.5119770752189	85.627	0.7395	87.174	86.677	87.417	1.547					38	30	2	0	0	0	0.1735	4	35913	35849;35913;35990;36056		36.044	7.0764	1	6949100			30708	7433	15213	15274	35501;35502;35503;35504	35502					0.0283494545776648
SDPVEVIPV	9	Unmodified	_SDPVEVIPV_					0	0	0		ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	ENST00000581216.5_2_17:29231492-29233241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.5164672732353	1	954.514239	953.506963	4.1015	0.0039149	-1.5223	-0.001453	2.5792	0.0024619	954.5132327710587	86.032	0.5123	87.579	87.417	87.929	1.547					39	19	3	0	0	0	0.22519	1	36235	36235		30.225	1.738	1	10919000			30709	7433	15213	15274	35505	35505					0.0283494545776648
SDQSENVDR	9	Unmodified	_SDQSENVDR_					0	0	0		nc|ENSG00000130770|Q9UII2-3|ATP5IF1;nc|ENSG00000130770|Q9UII2-2|ATP5IF1;ENSG00000130770|ENST00000335514|ATP5IF1	nc|ENSG00000130770|Q9UII2-3|ATP5IF1	nc|ENSG00000130770|Q9UII2-3|ATP5IF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2269775271416	2	525.228342	1048.44213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.937	1	25.937	25.437	26.437	0								0	0	0	0.42615	1	10827	10827		6.2058	1.4498	1				30710	2459	15214	15275	35506	35506					-0.08015281086181858
SDSDDYRK	8	Unmodified	_SDSDDYRK_					0	0	0			REV__tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	REV__tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2170898318291	2	493.214703	984.414853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.949	1	12.643	12.143	13.143	0.69396								0	0	0	1.0178	1	4964	4964		8.5933	0.68312	1		+		30711	15761	15215	15276	35507	35507					-0.07797764626570824
SDSNFSGATS	10	Unmodified	_SDSNFSGATS_					0	0	0			REV__tr|A0A7D6VTY5|A0A7D6VTY5_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23330PE=3SV=1	REV__tr|A0A7D6VTY5|A0A7D6VTY5_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.6994506716728	2	486.698886	971.383219	0.69572	0.00033861	4.4386	0.0021603	5.1344	0.0024989	486.70045054575536	17.406	0.40104	17.406	17.254	17.655	0					22	12	2	0	0	0	0.77604	1	7201	7201		14.838	1.3304	1	384180	+		30712	15506	15216	15277	35508	35508					-0.10361757380496783
SDSSSEPSYAR	11	Unmodified	_SDSSSEPSYAR_					0	0	0			REV__nc|ENSG00000169933|Q14CM0|FRMPD4	REV__nc|ENSG00000169933|Q14CM0|FRMPD4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	593.1586181521416	2	593.254557	1184.49456	1.8929	0.001123	-2.9403	-0.0017443	-1.0474	-0.00062137	593.2528213219634	71.082	0.22305	71.082	71.003	71.227	0					9	6	2	0	0	0	0.14606	1	29575	29575		1.0715	0	1	410460	+		30713	10969	15217	15278	35509	35509					-0.09030742743243536
SDSSSEPSYAR	11	Unmodified	_SDSSSEPSYAR_					0	0	0			REV__nc|ENSG00000169933|Q14CM0|FRMPD4	REV__nc|ENSG00000169933|Q14CM0|FRMPD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	593.254557	1184.49456	2.4422	0.0014489	0.37368	0.00022169	2.8159	0.0016705	593.2542504916158	69.637	0.21976	71.003	70.876	71.096	1.3657	-0.039805	0.0020372	NaN	1.0715	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	725580	+		30714	10969	15217	15278							-0.09030742743243536
SDSYPRRKE	9	Unmodified	_SDSYPRRKE_					0	0	0			REV__ENST00000602040.5_1_19:50354666-50357992:+|nuORF	REV__ENST00000602040.5_1_19:50354666-50357992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.2894775271416	2	569.285994	1136.55744	2.6359	0.0015006	1.7222	0.00098041	4.358	0.002481	569.2886188110282	108.48	0.25797	108.53	108.38	108.64	0.050644					46	14	4	0	0	0	0.83213	1	46605	46605		2.0598	0.40713	1	235080000	+		30715	9161	15218	15279	35510	35510					-0.005381321645245407
SDSYPRRKE	9	Unmodified	_SDSYPRRKE_					0	0	0			REV__ENST00000602040.5_1_19:50354666-50357992:+|nuORF	REV__ENST00000602040.5_1_19:50354666-50357992:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	569.285994	1136.55744	0.96546	0.00054962	2.3655	0.0013467	3.331	0.0018963	569.2894073424287	108.51	0.27814	108.51	108.32	108.6	0	-0.011622	0.00041343	NaN	2.0598	50	12	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	167850000	+		30716	9161	15218	15279							-0.005381321645245407
SDVANNNKN	9	Unmodified	_SDVANNNKN_					0	0	0			REV__nc|ENSG00000070961|P20020-6|ATP2B1	REV__nc|ENSG00000070961|P20020-6|ATP2B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2289611697197	2	488.228145	974.441737	3.4396	0.0016793	-1.1496	-0.00056127	2.29	0.001118	488.22751127927665	96.555	0.21171	96.66	96.573	96.785	0.105					31	6	7	0	0	0	0.61249	1	40390	40390		10.824	0	1	50668000	+		30717	8722	15219	15280	35511	35511					-0.04650656015382992
SDVANNNKN	9	Unmodified	_SDVANNNKN_					0	0	0			REV__nc|ENSG00000070961|P20020-6|ATP2B1	REV__nc|ENSG00000070961|P20020-6|ATP2B1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	488.228145	974.441737	3.4396	0.0016793	-1.1496	-0.00056127	2.29	0.001118	488.22751127927665	96.555	0.21171	96.66	96.573	96.785	0.105	0.055209	-0.0016607	NaN	10.824	31	6	7	NaN	NaN	NaN	NaN	0				NaN	NaN	0	50668000	+		30718	8722	15219	15280							-0.04650656015382992
SDVLYNTRHR	10	Unmodified	_SDVLYNTRHR_					0	0	0		sp|P16729|MCP_HCMVAMajorcapsidproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=MCPPE=1SV=1;sp|F5HGT1|MCP_HCMVMMajorcapsidproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=MCPPE=3SV=1	sp|P16729|MCP_HCMVAMajorcapsidproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=MCPPE=1SV=1	sp|P16729|MCP_HCMVAMajorcapsidproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=MCPPE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1260.647753894329	1	1260.64436	1259.63708	3.9284	0.0049523	-0.72188	-0.00091004	3.2065	0.0040422	1260.6425042921633	104.79	0.09343	104.84	104.8	104.89	0.056801					14	4	4	0	0	0	0.89803	1	44281	44281		1.6526	0	1	165250000			30719	15985	15220	15281	35512	35512					0.017649345094469027
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	898.3290893435478	1	898.327226	897.31995	1.1398	0.001024	1.3744	0.0012346	2.5142	0.0022586	898.3280685311063	107.57	0.13397	107.57	107.49	107.62	0					16	6	3	0	0	0	0.70108	1	46142	46142		7.2892	2.0586	1	26129000	+		30720	11633	15221	15282	35513	35513					-0.13281742888409553
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	898.3273193240166	1	898.327226	897.31995	1.1399	0.001024	0.31948	0.000287	1.4593	0.001311	898.3273554167919	108.29	0.1214	108.29	108.24	108.36	0					10	5	3	0	0	0	0.59203	1	46654	46654		11.64	2.2929	1	23162000	+		30721	11633	15221	15282	35514	35514					-0.13281742888409553
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	898.327226	897.31995	1.1399	0.001024	0.31948	0.000287	1.4593	0.001311	898.3273554167919	108.29	0.1214	108.29	108.24	108.36	0	-0.016779	0.00040661	NaN	11.64	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23162000	+		30722	11633	15221	15282							-0.13281742888409553
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	898.327226	897.31995	2.8126	0.0025266	-0.63007	-0.00056601	2.1825	0.0019606	898.3272446796594	108.28	0.099327	108.33	108.28	108.38	0.050644	0.016779	-0.00044639	NaN	11.64	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32029000	+		30723	11633	15221	15282							-0.13281742888409553
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	898.327226	897.31995	2.8971	0.0026025	-0.046436	-4.1715E-05	2.8506	0.0025608	898.3274871441663	107.49	0.094833	107.65	107.6	107.7	0.15781	0.046201	-6.2716E-06	NaN	7.2892	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4962400	+		30724	11633	15221	15282							-0.13281742888409553
SDVSSSDDS	9	Unmodified	_SDVSSSDDS_					0	0	0			REV__ENSG00000196422|ENST00000356818|PPP1R26	REV__ENSG00000196422|ENST00000356818|PPP1R26	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	898.327226	897.31995	3.0794	0.0027663	-1.4833	-0.0013325	1.5961	0.0014338	898.3259311852216	107.47	0.076141	107.62	107.58	107.66	0.15796	0.019339	-0.001297	NaN	7.2892	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2127000	+		30725	11633	15221	15282							-0.13281742888409553
SEAWVRRRLDR	11	Unmodified	_SEAWVRRRLDR_					0	0	0			REV__ENST00000357360.4_1_X:153707301-153707586:-|nuORF	REV__ENST00000357360.4_1_X:153707301-153707586:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	482.5438110232353	3	481.935769	1442.78548	0.62782	0.00030257	-0.27077	-0.0001305	0.35704	0.00017207	481.93643473421986	11.499	0.12252	11.499	11.42	11.543	0					6	3	2	0	0	0	0.14606	1	4742	4742		1.2148	0	1	1170900	+		30726	12561	15222	15283	35515	35515					0.08179665483157805
SEDEDEEEEER	11	Unmodified	_SEDEDEEEEER_					0	0	0		ENSG00000181291|ENST00000631683|TMEM132E	ENSG00000181291|ENST00000631683|TMEM132E	ENSG00000181291|ENST00000631683|TMEM132E	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2551147341728	2	698.255147	1394.49574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.1	1	50.43	49.93	50.93	0.33019								0	0	0	0.63775	1	20990	20990		1.0715	0	1				30727	4573	15223	15284	35516	35516					-0.1857261795564682
SEDEDEEEEER	11	Unmodified	_SEDEDEEEEER_					0	0	0		ENSG00000181291|ENST00000631683|TMEM132E	ENSG00000181291|ENST00000631683|TMEM132E	ENSG00000181291|ENST00000631683|TMEM132E	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2554199099541	2	698.255147	1394.49574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.164	1	54.485	53.985	54.985	0.32088								0	0	0	0.63775	1	22685	22685		1.0715	0	1				30728	4573	15223	15284	35517	35517					-0.1857261795564682
SEEELEDYIV	10	Unmodified	_SEEELEDYIV_					0	0	0		STK10-PCBD2|1|fusion;ENSG00000072786|ENST00000176763|STK10	STK10-PCBD2|1|fusion	STK10-PCBD2|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.2772094607353	2	613.277166	1224.53978	1.9374	0.0011881	-3.8276	-0.0023474	-1.8902	-0.0011592	613.2751297496726	55.138	0.17543	55.459	55.372	55.548	0.32088					9	5	2	0	0	0	0.81324	1	23088	23088		10.824	1.4408	1	786350			30729	889	15224	15285	35518	35518					-0.06350937000706836
SEEELEDYIV	10	Unmodified	_SEEELEDYIV_					0	0	0		STK10-PCBD2|1|fusion;ENSG00000072786|ENST00000176763|STK10	STK10-PCBD2|1|fusion	STK10-PCBD2|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	613.277166	1224.53978	2.2136	0.0013576	-4.7691	-0.0029248	-2.5555	-0.0015672	613.2744503675422	55.476	0.14514	55.476	55.408	55.553	0	0.0082115	-0.00088745	NaN	10.824	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669760			30730	889	15224	15285							-0.06350937000706836
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	481.1557189822197	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.91778	1	0.91778	0.41778	1.4178	0								0	0	0	1.0178	1	376	376		0	0	1		+		30731	14772	15225	15286	35519	35519					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	481.1534606814384	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4787	1	3.4787	2.9787	3.9787	0								0	0	0	1.0178	1	1428	1428		0.79363	0	1		+		30732	14772	15225	15286	35520	35520					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.1545593142509	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3607	1	2.9948	2.4948	3.4948	0.63417								0	0	0	1.0178	1	970	970		0	0	1		+		30733	14772	15225	15286	35521	35521					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.1541931033134	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2531	1	3.8767	3.3767	4.3767	0.62362								0	0	0	1.0178	1	1343	1343		0	0	1		+		30734	14772	15225	15286	35522	35522					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.1549865603447	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5387	1	4.1623	3.6623	4.6623	0.62362								0	0	0	1.0178	1	1461	1461		0	0	1		+		30735	14772	15225	15286	35523	35523					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.1544677615166	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6425	1	4.2661	3.7661	4.7661	0.62362								0	0	0	1.0178	1	1504	1504		0	0	1		+		30736	14772	15225	15286	35524	35524					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1549560427666	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.37463	1	1.1104	0.61041	1.6104	0.73579								0	0	0	1.0178	1	153	153		0	0	1		+		30737	14772	15225	15286	35525	35525					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1546508669853	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7336	1	2.482	1.982	2.982	0.7484								0	0	0	1.0178	1	718	718		0	0	1		+		30738	14772	15225	15286	35526	35526					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1544677615166	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9927	1	2.7411	2.2411	3.2411	0.7484								0	0	0	1.0178	1	826	826		0	0	1		+		30739	14772	15225	15286	35527	35527					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1543456912041	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1647	1	2.9131	2.4131	3.4131	0.7484								0	0	0	1.0178	1	897	897		0	0	1		+		30740	14772	15225	15286	35528	35528					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1534606814384	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6746	1	3.423	2.923	3.923	0.7484								0	0	0	1.0178	1	1110	1110		0	0	1		+		30741	14772	15225	15286	35529	35529					-0.18727217410844332
SEEHDDDD	8	Unmodified	_SEEHDDDD_					0	0	0			REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	REV__tr|A0A553SGZ3|A0A553SGZ3_NIACIPotassium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_11865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.1542236208916	2	481.154508	960.294463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3275	1	4.0728	3.5728	4.5728	0.74525								0	0	0	1.0178	1	1380	1380		0	0	1		+		30742	14772	15225	15286	35530	35530					-0.18727217410844332
SEFDCSRI	8	Unmodified	_SEFDCSRI_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7124816775322	2	478.710742	955.406931	2.1257	0.0010176	1.7318	0.00082905	3.8575	0.0018466	478.7111949166294	67.912	0.36839	69.782	69.549	69.917	1.87					29	11	3	0	0	0	0.87431	1	28499	28499		12.532	0	1	4778900	+		30743	9956	15226	15287	35531	35531					-0.0725561514769879
SEIILTFGGF	10	Unmodified	_SEIILTFGGF_					0	0	0		tr|A0A553SKA1|A0A553SKA1_NIACIDedAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_18425PE=3SV=1	tr|A0A553SKA1|A0A553SKA1_NIACIDedAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_18425PE=3SV=1	tr|A0A553SKA1|A0A553SKA1_NIACIDedAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_18425PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2958862185478	2	542.289682	1082.56481	3.0569	0.0016577	3.5908	0.0019473	6.6478	0.003605	542.2916655833819	73.943	0.33342	75.74	75.567	75.9	1.7962					20	10	3	0	0	0	0.38674	1	31013	31013		34.102	1.797	1	1751600			30744	16280	15227	15288	35532	35532					0.026832073831883463
SELLPEQVL	9	Unmodified	_SELLPEQVL_					0	0	0			REV__ENST00000482974.1_1_3:50607018-50607282:+|nuORF	REV__ENST00000482974.1_1_3:50607018-50607282:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2887451052666	2	514.28714	1026.55973	2.7941	0.001437	0.57498	0.00029571	3.3691	0.0017327	514.2874846950403	77.23	0.51015	78.511	78.217	78.728	1.2809					39	15	3	0	0	0	0.036104	1	32409	32409		88.904	7.2905	1	4604100	+		30745	13376	15228	15289	35533	35533					0.04750903520562133
SEMGLKQFAL	10	Unmodified	_SEMGLKQFAL_					0	0	0			REV__ENST00000466803.1_1_1:60330814-60338634:+|nuORF	REV__ENST00000466803.1_1_1:60330814-60338634:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.2969848513603	2	562.294442	1122.57433	2.301	0.0012938	0.47433	0.00026671	2.7753	0.0015606	562.2943483889189	80.817	0.36851	82.513	82.303	82.671	1.6959					27	11	3	0	0	0	0.81324	1	33880	33880		10.824	0	1	1986100	+		30746	9914	15229	15290	35534	35534					0.017946523970749695
SEMIYCDETI	10	Unmodified	_SEMIYCDETI_					0	0	0		tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	tr|A0A553SJQ5|A0A553SJQ5_NIACI2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylatesynthaseOS=NialliacirculansOX=1397GN=menDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.2556030154228	2	602.24904	1202.48353	3.307	0.0019916	2.4362	0.0014672	5.7431	0.0034588	602.2506243075422	94.38	0.43813	95.569	95.335	95.773	1.1887					66	13	7	0	0	0	0.82019	1	39752	39752		10.074	0	1	8874800			30747	16259	15230	15291	35535	35535					-0.10961604433373395
SEMYMDRSDN	10	Unmodified	_SEMYMDRSDN_					0	0	0			REV__ENST00000595231.5_1_19:49605423-49611697:+|nuORF	REV__ENST00000595231.5_1_19:49605423-49611697:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	624.2388183474541	2	624.236995	1246.45944	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.312	1	85.471	84.971	85.971	1.159								0	0	0	0.66052	1	35381	35381		3.5965	0	1		+		30748	9150	15231	15292	35536	35536					-0.15393444867027029
SEPHLGAYI	9	Unmodified	_SEPHLGAYI_					0	0	0		ENST00000560925.5_1_14:103571257-103576557:+|nuORF;ENSG00000205436|ENST00000688303|EXOC3L4	ENST00000560925.5_1_14:103571257-103576557:+|nuORF	ENST00000560925.5_1_14:103571257-103576557:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7512084841728	2	493.750724	985.486896	2.3317	0.0011513	-0.74083	-0.00036578	1.5909	0.00078549	493.750239225422	48.12	0.36701	50.097	49.899	50.266	1.9772					26	11	3	0	0	0	0.12174	1	20174	20174		42.095	0	1	2154700			30749	5181	15232	15293	35537	35537					-0.006428054821981277
SEQWRRSWR	9	Unmodified	_SEQWRRSWR_					0	0	0			REV__nc|ENSG00000038427|P13611-3|VCAN	REV__nc|ENSG00000038427|P13611-3|VCAN	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888427615166	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.021	1	22.596	22.096	23.096	1.5748								0	0	0	0.42693	1	8756	8756		0.26902	0.1097	1		+		30750	8589	15233	15294	35538	35538					0.004517739491802786
SERDLFEL	8	Unmodified	_SERDLFEL_					0	0	0			REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant;REV__FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant	REV__FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7561218142509	2	504.753464	1007.49238	3.5278	0.0017807	2.6371	0.0013311	6.1649	0.0031118	504.75482417709037	81.337	0.65179	82.57	82.284	82.936	1.2332					61	20	4	0	0	0	0.22866	1	34143	34143		78.149	0.16506	1	7494600	+		30751	11651;9971	15234	15295	35539	35539					-0.011071266903741162
SERLYDETKES	11	Unmodified	_SERLYDETKES_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1356.629077136517	1	1356.62777	1355.62049	2.7369	0.003713	-3.1397	-0.0042593	-0.40274	-0.00054637	1356.624695661605	104.81	0.09201	104.97	104.92	105.01	0.15993					15	4	4	0	0	0	0.85967	1	44506	44506		12.241	2.8575	1	48787000	+		30752	11477	15235	15296	35540	35540					-0.043096559578089
SERLYDETKES	11	Unmodified	_SERLYDETKES_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1356.62777	1355.62049	1.3529	0.0018353	-1.3718	-0.0018611	-0.018983	-2.5752E-05	1356.6277789928463	104.87	0.056198	104.87	104.85	104.9	0	-0.048739	0.00177	NaN	12.241	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11142000	+		30753	11477	15235	15296							-0.043096559578089
SERLYDETKES	11	Unmodified	_SERLYDETKES_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1356.62777	1355.62049	3.9271	0.0053277	-2.2692	-0.0030785	1.6579	0.0022492	1356.6253067486386	104.84	0.058105	104.9	104.85	104.91	0.056801	-0.019921	0.00055261	NaN	12.241	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8968600	+		30754	11477	15235	15296							-0.043096559578089
SERLYDETKES	11	Unmodified	_SERLYDETKES_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1356.62777	1355.62049	2.7369	0.003713	-3.1397	-0.0042593	-0.40274	-0.00054637	1356.624695661605	104.81	0.09201	104.97	104.92	105.01	0.15993	0.046506	-0.00062826	NaN	12.241	15	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	48787000	+		30755	11477	15235	15296							-0.043096559578089
SERLYDETKES	11	Unmodified	_SERLYDETKES_					0	0	0			REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	REV__nc|ENSG00000185842|Q0VDD8-4|DNAH14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1356.62777	1355.62049	2.1073	0.0028588	-2.9858	-0.0040506	-0.87856	-0.0011919	1356.6251698658507	104.78	0.073662	104.94	104.9	104.97	0.16679	0.022153	-0.00041956	NaN	12.241	15	3	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81785000	+		30756	11477	15235	15296							-0.043096559578089
SERLYGGE	8	Unmodified	_SERLYGGE_					0	0	0		tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	tr|A0A7D6W282|A0A7D6W282_9CLOTTrans-2-enoyl-CoAreductase[NADH]OS=ClostridiumintestinaleOX=36845GN=fabVPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	910.4288207888603	1	910.426487	909.41921	2.8071	0.0025556	0.24842	0.00022617	3.0555	0.0027818	910.4272080860574	104.8	0.09201	104.96	104.92	105.01	0.16055					19	4	5	0	0	0	0.87935	1	44488	44488		9.3474	0	1	658100000			30757	17028	15236	15297	35541	35541					-0.03912255412978993
SERVYDACMDA	11	Unmodified	_SERVYDACMDA_					0	0	0		nc|ENSG00000138814|Q08209-5|PPP3CA;nc|ENSG00000138814|Q08209-3|PPP3CA;nc|ENSG00000138814|Q08209-2|PPP3CA;ENSG00000138814|ENST00000394854|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	nc|ENSG00000138814|Q08209-5|PPP3CA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.5053588747978	3	420.505884	1258.49582	0.16175	6.8016E-05	-1.0374	-0.00043622	-0.87561	-0.0003682	420.50563552204954	26.197	1.3283	26.197	25.902	27.231	0					158	43	5	0	0	0	0.62604	1	11037	11037		12.228	0	1	30015000			30758	2857	15237	15298	35542	35542					-0.12308567970330841
SESVSVLI	8	Unmodified	_SESVSVLI_					0	0	0		tr|A0A553SRL4|A0A553SRL4_NIACIMn2+/Zn2+ABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_01185PE=3SV=1	tr|A0A553SRL4|A0A553SRL4_NIACIMn2+/Zn2+ABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_01185PE=3SV=1	tr|A0A553SRL4|A0A553SRL4_NIACIMn2+/Zn2+ABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_01185PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	833.4643432497978	1	833.461475	832.454199	2.0561	0.0017137	0.42901	0.00035756	2.4851	0.0020713	833.4619071551346	40.837	0.43941	42.163	41.897	42.336	1.3254					30	13	3	0	0	0	0.87276	1	17190	17190		13.508	0	1	5397300			30759	16566	15238	15299	35543	35543					0.03126987394978187
SEVTDLRR	8	Unmodified	_SEVTDLRR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;ENSG00000187242|ENST00000251643|KRT12;CON__Q99456	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	325.8452331423759	3	325.845446	974.514508	-1.4549	-0.00047406	0.9428	0.00030721	-0.51206	-0.00016685	325.8457588633673	12.428	0.24687	13.122	12.98	13.227	0.69396					15	7	3	0	0	0	0.70442	1	5169	5169		29.841	2.2118	1	1428900		+	30760	344	15239	15300	35544	35544					0.026230977780642206
SEVTDLRR	8	Unmodified	_SEVTDLRR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;ENSG00000187242|ENST00000251643|KRT12;CON__Q99456	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	325.8455383181572	3	325.845446	974.514508	-0.50416	-0.00016428	0.91732	0.0002989	0.41316	0.00013463	325.8457037048736	12.232	0.15464	13.02	12.941	13.095	0.78751					10	4	3	0	0	0	0.35609	1	5081	5081		63.961	16.212	1	1677400		+	30761	344	15239	15300	35545	35545					0.026230977780642206
SEWFWWYWQKE	11	Unmodified	_SEWFWWYWQKE_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	837.8737670779228	2	837.872434	1673.73031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.649	1	96.933	96.433	97.433	0.28442								0	0	0	0.63775	1	40667	40667		0.26902	0.26902	1				30762	455;6068	15240	15301	35546	35546					-0.07960185827960231
SEWFWWYWQKE	11	Unmodified	_SEWFWWYWQKE_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2;ENST00000367585.1_1_6:143823176-143832783:-|nuORF	ENSG00000001036|ENST00000002165|FUCA2;nc|ENSG00000001036|Q9BTY2-2|FUCA2	nc|ENSG00000001036|Q9BTY2-2|FUCA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	837.8698608279228	2	837.872434	1673.73031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.84	1	97.147	96.647	97.647	0.3062								0	0	0	0.63775	1	40735	40735		0.26902	0.26902	1				30763	455;6068	15240	15301	35547	35547					-0.07960185827960231
SFALEYLDKNQ	11	Unmodified	_SFALEYLDKNQ_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	664.3351928591728	2	664.330067	1326.64558	4.8898	0.0032485	2.1679	0.0014402	7.0577	0.0046887	664.331928368397	89.648	0.33846	90.668	90.461	90.8	1.0199					21	10	3	0	0	0	0.87205	1	37784	37784		11.495	2.1116	1	1254800	+		30764	9085	15241	15302	35548	35548					-0.004675563645832881
SFALEYLDKNQ	11	Unmodified	_SFALEYLDKNQ_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	664.3323852419853	2	664.330067	1326.64558	4.4816	0.0029773	1.635	0.0010862	6.1166	0.0040634	664.3314142703705	89.243	0.31038	90.648	90.488	90.798	1.4045					13	9	2	0	0	0	0.91768	1	37642	37642		8.7454	0	1	1024200	+		30765	9085	15241	15302	35549	35549					-0.004675563645832881
SFALEYLDKNQ	11	Unmodified	_SFALEYLDKNQ_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	664.330067	1326.64558	4.8898	0.0032485	2.1679	0.0014402	7.0577	0.0046887	664.331928368397	89.648	0.33846	90.668	90.461	90.8	1.0199	0.010297	0.00016673	NaN	11.495	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1254800	+		30766	9085	15241	15302							-0.004675563645832881
SFALEYLDKNQ	11	Unmodified	_SFALEYLDKNQ_					0	0	0			REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	REV__nc|ENSG00000102890|Q96BJ8-2|ELMO3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	664.330067	1326.64558	4.4816	0.0029773	1.635	0.0010862	6.1166	0.0040634	664.3314142703705	89.243	0.31038	90.648	90.488	90.798	1.4045	-0.010297	-0.00054134	NaN	11.495	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1024200	+		30767	9085	15241	15302							-0.004675563645832881
SFCHPLFYI	9	Unmodified	_SFCHPLFYI_					0	0	0			REV__ENST00000466187.2_1_10:70105306-70105504:-|nuORF	REV__ENST00000466187.2_1_10:70105306-70105504:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	563.2343017458916	2	563.773145	1125.53174	2.4764	0.0013961	1.6971	0.00095676	4.1735	0.0023529	563.774185366762	59.213	0.3019	60.633	60.467	60.769	1.4196					11	9	2	0	0	0	0.11645	1	24798	24798		8.5933	0.68312	1	820860	+		30768	13238	15242	15303	35550	35550					-0.026006979405110542
SFCHPLFYI	9	Unmodified	_SFCHPLFYI_					0	0	0			REV__ENST00000466187.2_1_10:70105306-70105504:-|nuORF	REV__ENST00000466187.2_1_10:70105306-70105504:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	563.773145	1125.53174	2.3085	0.0013015	1.1723	0.0006609	3.4808	0.0019624	563.773467941853	58.798	0.21145	60.767	60.633	60.844	1.969	0.067404	-0.00039156	NaN	2.0598	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	915530	+		30769	13238	15242	15303							-0.026006979405110542
SFEEFKNL	8	Unmodified	_SFEEFKNL_					0	0	0		tr|A0A553STX8|A0A553STX8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05930PE=4SV=1	tr|A0A553STX8|A0A553STX8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05930PE=4SV=1	tr|A0A553STX8|A0A553STX8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05930PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2503539919853	2	507.250557	1012.48656	1.9085	0.0009681	-2.7799	-0.0014101	-0.87134	-0.00044199	507.2493369471368	76.953	0.35167	78.721	78.514	78.865	1.7672					16	10	2	0	0	0	0.87431	1	32286	32286		12.532	2.3482	1	439910			30770	16670	15243	15304	35551	35551					-0.019182252020527812
SFETYLCIL	9	Unmodified	_SFETYLCIL_					0	0	0			REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7692748904228	2	544.770268	1087.52598	2.3654	0.0012886	-3.5963	-0.0019592	-1.2309	-0.00067057	544.7679267740972	84.374	0.29633	85.971	85.829	86.126	1.5962					15	9	2	0	0	0	0.24063	1	35417	35417		28.487	3.813	1	1422100	+		30771	14176	15244	15305	35552	35552					-0.014278412428438969
SFETYLCIL	9	Unmodified	_SFETYLCIL_					0	0	0			REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.770268	1087.52598	2.0608	0.0011227	-3.0887	-0.0016826	-1.0278	-0.00055992	544.7678855587883	84.882	0.30576	86.041	85.905	86.21	1.159	0.035264	0.00038752	NaN	28.487	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2270900	+		30772	14176	15244	15305							-0.014278412428438969
SFETYLCIL	9	Unmodified	_SFETYLCIL_					0	0	0			REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	REV__Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|70|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	544.770268	1087.52598	2.3654	0.0012886	-3.5963	-0.0019592	-1.2309	-0.00067057	544.7679267740972	84.374	0.29633	85.971	85.829	86.126	1.5962	-0.035264	-0.00016562	NaN	28.487	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1422100	+		30773	14176	15244	15305							-0.014278412428438969
SFFFFFRHR	9	Unmodified	_SFFFFFRHR_					0	0	0		chr7:102584338-102587262|114|12.57|0.0|20.26|-|2|TE_info:AluSx1,AluSx1_dup45343,Alu,SINE,donor,+,102587262,102587369|RASA4,None|1	chr7:102584338-102587262|114|12.57|0.0|20.26|-|2|TE_info:AluSx1,AluSx1_dup45343,Alu,SINE,donor,+,102587262,102587369|RASA4,None|1	chr7:102584338-102587262|114|12.57|0.0|20.26|-|2|TE_info:AluSx1,AluSx1_dup45343,Alu,SINE,donor,+,102587262,102587369|RASA4,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889037966728	3	430.889209	1289.6458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.489	1	20.548	20.048	21.048	1.0585								0	0	0	0.42693	1	8118	8118		1.0715	0	1				30774	278	15245	15306	35553	35553					0.0125595293659444
SFFMLIFILTL	11	Unmodified	_SFFMLIFILTL_					0	0	0			REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.8868896365166	2	672.885435	1343.75632	2.3608	0.0015885	-0.59316	-0.00039913	1.7676	0.0011894	672.8847839560092	60.557	0.32213	60.557	60.412	60.734	0					24	9	3	0	0	0	0.098753	2	25236	25236;25285		56.177	0	1	1678700	+		30775	12700	15246	15307	35554;35555	35554					0.09818992089958556
SFFMLIFILTL	11	Unmodified	_SFFMLIFILTL_					0	0	0			REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.8847534060478	2	672.885435	1343.75632	2.2198	0.0014937	-1.5648	-0.0010529	0.65498	0.00044073	672.8844816043783	59.972	0.31858	60.3	60.123	60.442	0.32809					24	10	3	0	0	0	0.098753	1	25119	25119		56.177	0	1	1707700	+		30776	12700	15246	15307	35556	35556					0.09818992089958556
SFFMLIFILTL	11	Unmodified	_SFFMLIFILTL_					0	0	0			REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	REV__ENST00000373913.7_1_20:35155797-35155968:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.8862792849541	2	672.885435	1343.75632	1.3707	0.00092234	-0.71557	-0.0004815	0.65515	0.00044084	672.884909161183	58.795	0.37696	60.213	60.003	60.38	1.4181					38	11	5	0	0	0	0.098753	1	24648	24648		56.177	0	1	18429000	+		30777	12700	15246	15307	35557	35557					0.09818992089958556
SFFPRGFLW	9	Unmodified	_SFFPRGFLW_					0	0	0		ENST00000462189.1_1_2:74688404-74690534:-|nuORF;nc|ENSG00000115275|Q13724-2|MOGS;MOGS|p.P775Lfs*21|1|0.12|ENSG00000115275|chr2:74461466-74461467|-/CAAATCTGGCAAAAGCAATAGAGTTCAA|frameshift_variant;ENSG00000115275|ENST00000448666|MOGS	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8015624880791	2	578.800552	1155.58655	3.4037	0.0019701	-1.5848	-0.0009173	1.8189	0.0010528	578.8002087635736	81.607	0.52454	82.84	82.595	83.119	1.2332					40	16	3	0	0	0	0.12251	2	34232	34232;34287		41.84	19.103	1	2147500			30778	1909	15247	15308	35558;35559	35558					0.014980569224007922
SFFPRGFLW	9	Unmodified	_SFFPRGFLW_					0	0	0		ENST00000462189.1_1_2:74688404-74690534:-|nuORF;nc|ENSG00000115275|Q13724-2|MOGS;MOGS|p.P775Lfs*21|1|0.12|ENSG00000115275|chr2:74461466-74461467|-/CAAATCTGGCAAAAGCAATAGAGTTCAA|frameshift_variant;ENSG00000115275|ENST00000448666|MOGS	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	ENST00000462189.1_1_2:74688404-74690534:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.8039428591728	2	578.800552	1155.58655	2.9461	0.0017052	-1.0615	-0.00061442	1.8846	0.0010908	578.8004053347161	81.113	0.49604	82.809	82.61	83.106	1.6959					36	15	3	0	0	0	0.17276	2	34001	34001;34052		36.127	16.87	1	2294300			30779	1909	15247	15308	35560;35561	35560					0.014980569224007922
SFGGPDAC	8	Unmodified	_SFGGPDAC_					0	0	0		FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant;ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.1491271853447	2	377.147246	752.27994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.786	1	86.382	85.882	86.882	1.5962								0	0	0	1.0178	1	35562	35562		2.5775	0	1				30780	5461	15248	15309	35562	35562					-0.10610916302027817
SFGGPDAC	8	Unmodified	_SFGGPDAC_					0	0	0		FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant;ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.1480590701103	2	377.147246	752.27994	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.885	1	86.481	85.981	86.981	1.5962								0	0	0	1.0178	1	35607	35607		2.5775	0	1				30781	5461	15248	15309	35563	35563					-0.10610916302027817
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1686889529228	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.403	1	87.529	87.029	88.029	1.1265								0	0	0	1.0178	1	36401	36401		1.6526	0	1		+		30782	12428	15249	15310	35564	35564					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1685668826103	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.502	1	87.628	87.128	88.128	1.1265								0	0	0	1.0178	1	36451	36451		1.6526	0	1		+		30783	12428	15249	15310	35565	35565					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1688110232353	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.612	1	87.739	87.239	88.239	1.1265								0	0	0	1.0178	1	36505	36505		1.6526	0	1		+		30784	12428	15249	15310	35566	35566					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1692687869072	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.825	1	87.917	87.417	88.417	1.0918								0	0	0	1.0178	1	36608	36608		1.6526	0	1		+		30785	12428	15249	15310	35567	35567					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1697265505791	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.045	1	88.137	87.637	88.637	1.0918								0	0	0	1.0178	1	36712	36712		1.6526	0	1		+		30786	12428	15249	15310	35568	35568					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1703979372978	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.143	1	88.234	87.734	88.734	1.0918								0	0	0	1.0178	1	36753	36753		1.6526	0	1		+		30787	12428	15249	15310	35569	35569					0.012683551657119096
SFGGWKRP	8	Unmodified	_SFGGWKRP_					0	0	0			REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	REV__ENST00000325385.11_1_2:233201537-233201696:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	312.1697265505791	3	312.167972	933.482085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.304	1	88.396	87.896	88.896	1.0918								0	0	0	1.0178	1	36820	36820		1.6526	0	1		+		30788	12428	15249	15310	35570	35570					0.012683551657119096
SFGTIIPKNL	10	Unmodified	_SFGTIIPKNL_					0	0	0			REV__tr|A0A7D6VP87|A0A7D6VP87_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21545PE=3SV=1	REV__tr|A0A7D6VP87|A0A7D6VP87_9CLOTLD-carboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21545PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3198119997978	2	545.318774	1088.623	1.9408	0.0010584	-0.88856	-0.00048455	1.0523	0.00057382	545.3177353622264	69.319	1.4655	70.685	69.694	71.159	1.3657					70	47	2	0	0	0	0.85124	1	28961	28961		6.7232	1.4925	1	2154700	+		30789	15353	15250	15311	35571	35571					0.08222889028479585
SFHLIVVF	8	Unmodified	_SFHLIVVF_					0	0	0		tr|A0A553SMZ0|A0A553SMZ0_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23435PE=4SV=1	tr|A0A553SMZ0|A0A553SMZ0_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23435PE=4SV=1	tr|A0A553SMZ0|A0A553SMZ0_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23435PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	480.8025695681572	2	481.278921	960.543289	1.6142	0.0007769	3.0912	0.0014877	4.7054	0.0022646	481.2802303911249	78.01	0.53043	79.761	79.526	80.057	1.7514					50	16	4	0	0	0	2.3239	1	32630	32630		0	0	1	10501000			30790	16403	15251	15312	35572	35572					0.06143867145146942
SFILGSALI	9	Unmodified	_SFILGSALI_					0	0	0			REV__tr|A0A553SPH0|A0A553SPH0_NIACIMembraneproteinYkvIOS=NialliacirculansOX=1397GN=CEQ21_26370PE=4SV=1	REV__tr|A0A553SPH0|A0A553SPH0_NIACIMembraneproteinYkvIOS=NialliacirculansOX=1397GN=CEQ21_26370PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	460.7772094607353	2	460.776211	919.537869	2.8481	0.0013123	-0.020077	-9.2509E-06	2.828	0.0013031	460.77615114422565	44.921	0.54005	46.287	46.023	46.563	1.3653					41	16	3	0	0	0	0.051699	1	18882	18882		67.344	6.9543	1	47165000	+		30791	15088	15252	15313	35573	35573					0.07488143562670757
SFILVKRKP	9	Unmodified	_SFILVKRKP_					0	0	0		ENSG00000167139|ENST00000300504|TBC1D21	ENSG00000167139|ENST00000300504|TBC1D21	ENSG00000167139|ENST00000300504|TBC1D21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3538085818291	2	544.352951	1086.69135	2.7549	0.0014997	-0.25761	-0.00014023	2.4973	0.0013594	544.3528474339771	107.52	0.19644	107.57	107.48	107.68	0.052452					46	9	7	0	0	0	0.85019	1	45997	45997		0.52476	0	1	173090000			30792	3951	15253	15314	35574	35574					0.15147178398979122
SFITHSLKF	9	Unmodified	_SFITHSLKF_					0	0	0		ENST00000510237.5_1_18:13103579-13124766:+|nuORF;ENST00000540847.6_1_18:13088862-13124766:+|nuORF;ENST00000513432.5_1_18:13059017-13124766:+|nuORF;nc|ENSG00000101639|Q8TEP8-1|CEP192;ENSG00000101639|ENST00000506447|CEP192	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	ENST00000510237.5_1_18:13103579-13124766:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5344116091728	3	360.53432	1078.58113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.913	1	40.75	40.25	41.25	1.8366								0	0	0	0.41323	1	16317	16317		7.4771	0.84669	1				30793	1362	15254	15315	35575	35575					0.04498333339961391
SFITSSWTF	9	Unmodified	_SFITSSWTF_					0	0	0		ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2597534060478	2	538.258382	1074.50221	2.9172	0.0015702	0.49527	0.00026659	3.4125	0.0018368	538.2583392804761	79.348	0.43768	80.615	80.378	80.815	1.2668					43	13	4	0	0	0	0.076627	3	33308	33259;33308;33363		57.471	23.369	1	11347000			30794	1959	15255	15316	35576;35577;35578	35577					-0.03205938685005094
SFITSSWTF	9	Unmodified	_SFITSSWTF_					0	0	0		ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1075.513110339642	1	1075.50949	1074.50221	2.962	0.0031857	0.10803	0.00011619	3.07	0.0033018	1075.5093607771591	79.336	0.43768	80.603	80.378	80.815	1.2668					34	13	3	0	0	0	0.026628	3	33307	33260;33307;33346		92.822	35.351	1	6316700			30795	1959	15255	15316	35579;35580;35581	35580					-0.03205938685005094
SFITSSWTF	9	Unmodified	_SFITSSWTF_					0	0	0		ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2595092654228	2	538.258382	1074.50221	2.2666	0.00122	0.81603	0.00043924	3.0827	0.0016593	538.2585409044776	78.832	0.61987	80.567	80.35	80.97	1.735					47	19	4	0	0	0	0.076627	3	33070	33027;33070;33113		57.471	21.344	1	9793000			30796	1959	15255	15316	35582;35583;35584	35583					-0.03205938685005094
SFITSSWTF	9	Unmodified	_SFITSSWTF_					0	0	0		ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	ENSG00000116209|ENST00000234831|TMEM59	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1075.513354480267	1	1075.50949	1074.50221	2.4519	0.002637	0.46975	0.00050522	2.9216	0.0031423	1075.5097752852041	78.91	0.37085	80.645	80.413	80.784	1.735					27	11	3	0	0	0	0.042029	2	33036	33036;33088		74.423	32.328	1	5329300			30797	1959	15255	15316	35585;35586	35585					-0.03205938685005094
SFKREPPAI	9	Unmodified	_SFKREPPAI_					0	0	0			REV__ENST00000415776.1_1_Y:19868883-19869072:-|nuORF	REV__ENST00000415776.1_1_Y:19868883-19869072:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7990600466728	2	522.795466	1043.57638	1.7098	0.00089385	1.4481	0.00075707	3.1579	0.0016509	522.7964043587594	42.978	0.34777	44.318	44.077	44.425	1.3399					25	10	3	0	0	0	0.12174	1	17980	17980		42.095	2.1372	1	3950300	+		30798	12942	15256	15317	35587	35587					0.05633449197171103
SFKREWKKA	9	Unmodified	_SFKREWKKA_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2267333865166	3	393.892619	1178.65603	0.074359	2.9289E-05	-1.4184	-0.00055868	-1.344	-0.00052939	394.2262348550561	16.052	0.1157	17.092	17.037	17.153	1.0392					6	3	2	0	0	0	0.81521	1	6679	6679		2.7352	0	1	565020	+		30799	11089	15257	15318	35588	35588					0.0738451587117197
SFKREWKKA	9	Unmodified	_SFKREWKKA_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	393.892619	1178.65603	-0.23291	-9.1742E-05	-0.030375	-1.1964E-05	-0.26329	-0.00010371	393.8927525258623	16.339	0.16019	17.165	17.045	17.205	0.82643	0.036732	0.00019326	NaN	2.7352	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	395170	+		30800	11089	15257	15318							0.0738451587117197
SFKREWKKA	9	Unmodified	_SFKREWKKA_					0	0	0			REV__nc|ENSG00000173230|Q14789-4|GOLGB1	REV__nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	393.892619	1178.65603	0.074359	2.9289E-05	-1.4184	-0.00055868	-1.344	-0.00052939	394.2262348550561	16.052	0.1157	17.092	17.037	17.153	1.0392	-0.036732	-0.0014469	NaN	2.7352	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565020	+		30801	11089	15257	15318							0.0738451587117197
SFKSKKKKKKK	11	Unmodified	_SFKSKKKKKKK_					0	0	0		L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|21|1|sense	L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|21|1|sense	L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|21|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.9835388064384	4	341.982961	1363.90274	-0.0063856	-2.1838E-06	-0.086105	-2.9446E-05	-0.092491	-3.163E-05	341.98293434759955	21.663	0.40675	23.279	23.142	23.548	1.6158					24	13	2	0	0	0	1.0405	1	9048	9048		0	0	1	1816200			30802	7707	15258	15319	35589	35589					0.2353443037004581
SFKSNGPNDR	10	Unmodified	_SFKSNGPNDR_					0	0	0			REV__ENST00000337702.4_1_5:40716550-40728504:-|nuORF	REV__ENST00000337702.4_1_5:40716550-40728504:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2690917849541	2	561.270344	1120.52613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.636	1	22.813	22.313	23.313	1.177								0	0	0	0.65926	1	9036	9036		5.7319	0.50118	1		+		30803	12476	15259	15320	35590	35590					-0.029307051986279475
SFLIGSSVIL	10	Unmodified	_SFLIGSSVIL_					0	0	0		ENST00000521390.5_1_5:156887274-156894344:+|nuORF;nc|ENSG00000172548|Q0D2K0-2|NIPAL4;ENSG00000172548|ENST00000311946|NIPAL4	ENST00000521390.5_1_5:156887274-156894344:+|nuORF	ENST00000521390.5_1_5:156887274-156894344:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3105956912041	2	518.307875	1034.6012	2.1337	0.0011059	-1.5489	-0.00080282	0.58475	0.00030308	518.3071360205995	66.51	0.85248	67.898	67.269	68.121	1.3888					66	27	3	0	0	0	0.35292	1	27823	27823		36.127	3.8215	1	8803700			30804	4244	15260	15321	35591	35591					0.08528084279919312
SFLLCIGWL	9	Unmodified	_SFLLCIGWL_					0	0	0		nc|ENSG00000050628|P43115-3|PTGER3;nc|ENSG00000050628|P43115-4|PTGER3;nc|ENSG00000050628|P43115-2|PTGER3;ENSG00000050628|ENST00000306666|PTGER3;nc|ENSG00000050628|P43115-7|PTGER3;nc|ENSG00000050628|P43115-8|PTGER3;nc|ENSG00000050628|P43115-9|PTGER3;nc|ENSG00000050628|P43115-5|PTGER3;nc|ENSG00000050628|P43115-11|PTGER3;nc|ENSG00000050628|P43115-6|PTGER3;nc|ENSG00000050628|P43115-12|PTGER3;nc|ENSG00000050628|P43115-10|PTGER3	nc|ENSG00000050628|P43115-3|PTGER3	nc|ENSG00000050628|P43115-3|PTGER3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	351.2420532107353	3	351.193018	1050.55722	0.35816	0.00012578	3.3172	0.001165	3.6754	0.0012908	351.1939071870269	22.384	0.18002	22.607	22.494	22.674	0.223					8	5	2	0	0	0	0.11716	1	9327	9327		4.897	3.7037	1	533690			30805	701	15261	15322	35592	35592					0.03396776581917038
SFLLLYYWW	9	Unmodified	_SFLLLYYWW_					0	0	0		tr|A0A553SQW4|A0A553SQW4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07335PE=4SV=1	tr|A0A553SQW4|A0A553SQW4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07335PE=4SV=1	tr|A0A553SQW4|A0A553SQW4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07335PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883239626884	3	430.890104	1289.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4886	1	6.4886	5.9886	6.9886	0								0	0	0	0.42693	1	2665	2665		0.26902	0.1097	1				30806	16533	15262	15323	35593	35593					0.015243635508795705
SFLRCFCLF	9	Unmodified	_SFLRCFCLF_					0	0	0			REV__nc|ENSG00000178950|O14976-2|GAK	REV__nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.2794067263603	2	568.274998	1134.53544	4.2409	0.00241	2.3478	0.0013342	6.5887	0.0037442	568.2755386960379	93.635	0.44513	94.507	94.353	94.798	0.87176					21	13	2	0	0	0	0.49082	1	39425	39425		15.847	0	1	785320	+		30807	11263	15263	15324	35594	35594					-0.026443514383117872
SFLRRRRRFKK	11	Unmodified	_SFLRRRRRFKK_					0	0	0		ENSG00000054598|ENST00000645831|FOXC1;ENSG00000176692|ENST00000649859|FOXC2	ENSG00000054598|ENST00000645831|FOXC1	ENSG00000054598|ENST00000645831|FOXC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	775.4792968630791	2	775.48676	1548.95897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.93	1	105.09	104.59	105.59	0.15859								0	0	0	0.63775	1	44583	44583		0	0	1				30808	714	15264	15325	35595	35595					0.2064449605009031
SFLVFSLIS	9	Unmodified	_SFLVFSLIS_					0	0	0		ENST00000472898.5_1_1:155981561-155990687:-|nuORF;ENST00000368311.5_1_1:155981561-155981702:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	ENST00000472898.5_1_1:155981561-155990687:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.573779284954	1	1012.57136	1011.56408	1.6203	0.0016406	0.50089	0.00050719	2.1212	0.0021478	1012.5708377574109	77.114	0.4494	78.865	78.623	79.073	1.7514					22	13	2	0	0	0	0.24063	1	32349	32349		28.487	5.3384	1	1087800			30809	6763	15265	15326	35596	35596					0.058764127341419226
SFLYFLFH	8	Unmodified	_SFLYFLFH_					0	0	0			REV__ENST00000358812.8_1_6:96034307-96034382:+|nuORF	REV__ENST00000358812.8_1_6:96034307-96034382:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.8614379763603	2	537.276378	1072.5382	2.5439	0.0013668	-4.148	-0.0022286	-1.604	-0.00086181	537.2731675395299	47.121	0.22038	49.097	48.966	49.187	1.976					10	6	2	0	0	0	2.3239	1	19736	19736		10.183	0	1	460730	+		30810	12579	15266	15327	35597	35597					0.004835632825006542
SFLYMNLSI	9	Unmodified	_SFLYMNLSI_					0	0	0			REV__L1MEd_dup7667|chr6:8012359-8012802:+|1.0229559823049363|0.4417392873998776|1.21|429.0|10|2|sense	REV__L1MEd_dup7667|chr6:8012359-8012802:+|1.0229559823049363|0.4417392873998776|1.21|429.0|10|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.7386352419853	2	544.27826	1086.54197	3.3385	0.0018171	3.1123	0.001694	6.4508	0.003511	544.7824565981023	81.312	0.49252	83.008	82.766	83.258	1.6959					48	15	4	0	0	0	0.10591	1	34055	34055		7.9102	0	1	5824900	+		30811	14285	15267	15328	35598	35598					0.002158649940838586
SFNKAKNEIF	10	Unmodified	_SFNKAKNEIF_					0	0	0			REV__tr|A0A7D6ZPI3|A0A7D6ZPI3_9CLOTDUF554domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20435PE=4SV=1	REV__tr|A0A7D6ZPI3|A0A7D6ZPI3_9CLOTDUF554domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20435PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2912475466728	2	599.316763	1196.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.421	1	50.399	49.899	50.899	1.9772								0	0	0	0.65894	1	20282	20282		6.2058	0	1		+		30812	15682	15268	15329	35599	35599					0.028527995347531032
SFNKLSKVTIA	11	Unmodified	_SFNKLSKVTIA_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.3571044802666	2	604.355888	1206.69722	2.9898	0.0018069	-0.10974	-6.6321E-05	2.88	0.0017406	604.3560061354474	87.189	0.82157	87.189	86.612	87.434	0					153	33	5	0	0	0	1.0366	2	36200	36200;36327		1.1933	0.66858	1	97432000			30813	2854	15269	15330	35600;35601	35600					0.10214232120006272
SFNKLSKVTIA	11	Unmodified	_SFNKLSKVTIA_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3574706912041	2	604.355888	1206.69722	2.4803	0.001499	0.58818	0.00035547	3.0685	0.0018544	604.3564272727872	86.972	0.89062	87.216	86.606	87.496	0.24387					149	35	5	0	0	0	1.0366	4	36281	36281;36334;36400;36517		1.1933	0.66858	1	91881000			30814	2854	15269	15330	35602;35603;35604;35605	35602					0.10214232120006272
SFNKLSKVTIA	11	Unmodified	_SFNKLSKVTIA_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3583862185478	2	604.355888	1206.69722	2.8873	0.001745	0.90535	0.00054716	3.7927	0.0022921	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	1.0366	1	35901	35901		1.1933	0.66858	1	89814000			30815	2854	15269	15330	35606	35606					0.10214232120006272
SFNKLSKVTIA	11	Unmodified	_SFNKLSKVTIA_					0	0	0		ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	ENSG00000138771|ENST00000296043|SHROOM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3580810427666	2	604.355888	1206.69722	3.1699	0.0019157	0.11128	6.7254E-05	3.2812	0.001983	604.3561534507077	85.185	0.9964	86.782	86.401	87.397	1.5962					136	40	5	0	0	0	1.0366	1	35659	35659		1.1933	0.66858	1	92723000			30816	2854	15269	15330	35607	35607					0.10214232120006272
SFPFTYNLF	9	Unmodified	_SFPFTYNLF_					0	0	0			REV__ENST00000528023.3_1_15:41455975-41456569:+|nuORF	REV__ENST00000528023.3_1_15:41455975-41456569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.7802001833916	2	568.276575	1134.5386	3.2879	0.0018684	0.16731	9.5077E-05	3.4552	0.0019635	568.2762108336179	93.225	0.44379	94.502	94.26	94.704	1.277					25	13	2	0	0	0	0.49082	1	39238	39238		15.847	0	1	783020	+		30817	13682	15270	15331	35608	35608					-0.023290617882821607
SFPKGILV	8	Unmodified	_SFPKGILV_					0	0	0			REV__ENST00000498029.1_1_X:153648339-153649340:+|nuORF	REV__ENST00000498029.1_1_X:153648339-153649340:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	430.8200866580009	2	430.765646	859.516739	0.56567	0.00024367	0.056042	2.4141E-05	0.62171	0.00026781	430.766130227186	101.36	0.151	101.36	101.26	101.41	0					8	4	3	0	0	0	2.3239	1	42451	42451		0.79363	0	1	1624000	+		30818	9059	15271	15332	35609	35609					0.081361782538238
SFRAPCTR	8	Unmodified	_SFRAPCTR_					0	0	0			REV__ENST00000219271.3_1_16:58059493-58060384:+|nuORF	REV__ENST00000219271.3_1_16:58059493-58060384:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	313.1607238650322	3	313.1606	936.45997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.91	1	109.91	109.41	110.41	0								0	0	0	1.0178	1	47591	47591		3.9444	0	1		+		30819	12078	15272	15333	35610	35610					-0.010801925743635366
SFRAPCTR	8	Unmodified	_SFRAPCTR_					0	0	0			REV__ENST00000219271.3_1_16:58059493-58060384:+|nuORF	REV__ENST00000219271.3_1_16:58059493-58060384:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	313.1599609255791	3	313.1606	936.45997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.03	1	110.03	109.53	110.53	0								0	0	0	1.0178	1	47642	47642		3.9444	0	1		+		30820	12078	15272	15333	35611	35611					-0.010801925743635366
SFRDFNSF	8	Unmodified	_SFRDFNSF_					0	0	0		PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2341186404228	2	510.232699	1018.45084	0.919	0.0004689	2.2126	0.0011289	3.1316	0.0015978	510.23411787564334	25.627	0.21392	27.344	27.245	27.459	1.7167					11	6	2	0	0	0	0.84871	1	10756	10756		16.942	0.79319	1	772690			30821	8053	15273	15334	35612	35612					-0.05764262659045016
SFRHDKLTFID	11	Unmodified	_SFRHDKLTFID_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	690.3591796755791	2	689.859326	1377.7041	0.13719	9.464E-05	0.68921	0.00047546	0.8264	0.0005701	690.3611224729021	37.461	0.28349	39.281	39.145	39.429	1.8202					22	9	3	0	0	0	0.6971	1	15743	15743		18.373	0.93045	1	2281500			30822	4631	15274	15335	35613	35613					0.03035545000534512
SFRHDKLTFID	11	Unmodified	_SFRHDKLTFID_					0	0	0		ENSG00000182871|ENST00000651438|COL18A1;nc|ENSG00000182871|P39060-1|COL18A1;nc|ENSG00000182871|P39060|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	ENSG00000182871|ENST00000651438|COL18A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	689.859326	1377.7041	0.87296	0.00060222	-0.96795	-0.00066775	-0.094992	-6.5531E-05	689.8591429169218	38.008	0.26647	39.292	39.196	39.462	1.284	0.0053697	-0.0012135	NaN	18.373	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5872100			30823	4631	15274	15335							0.03035545000534512
SFSPCDWAL	9	Unmodified	_SFSPCDWAL_					0	0	0			REV__MER81_dup235|chr1:206069521-206069622:+|2.137931608245025|0.1081369337007162|4.31|423.0|4|3|sense	REV__MER81_dup235|chr1:206069521-206069622:+|2.137931608245025|0.1081369337007162|4.31|423.0|4|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2252075076103	2	513.223485	1024.43242	2.2067	0.0011326	-0.1779	-9.1303E-05	2.0288	0.0010413	513.2229509115195	64.971	0.49919	66.879	66.596	67.095	1.9085					26	15	2	0	0	0	0.66839	1	27270	27270		8.5933	0	1	856660	+		30824	14364	15275	15336	35614	35614					-0.0788214062527004
SFSPLDELL	9	Unmodified	_SFSPLDELL_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	510.3173400759697	2	510.76604	1019.51753	1.9634	0.0010028	-0.152	-7.7635E-05	1.8114	0.00092521	510.7662793466298	71.705	0.27943	73.047	72.842	73.122	1.3415					13	8	2	0	0	0	0.10591	1	30087	30087		18.135	1.1927	1	1503600	+		30825	8253	15276	15337	35615	35615					0.008549281121986496
SFSRLIRRRLQ	11	Unmodified	_SFSRLIRRRLQ_					0	0	0			REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	478.1982604861259	3	477.960026	1430.85825	2.4941	0.0011921	0.41947	0.00020049	2.9136	0.0013926	478.29502769405303	83.059	0.5022	84.247	84.202	84.704	1.1879					20	15	2	0	0	0	0.14606	1	34884	34884		0.40827	0	1	486520	+		30826	13093	15277	15338	35616	35616					0.16005419276598332
SFSRLIRRRLQ	11	Unmodified	_SFSRLIRRRLQ_					0	0	0			REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	477.7624694705009	3	477.960026	1430.85825	3.6771	0.0017575	-1.8039	-0.00086218	1.8732	0.00089531	477.95863733001937	86.492	0.63434	87.619	87.462	88.097	1.1265					43	23	2	0	0	0	0.14606	1	36418	36418		0	0	1	3425500	+		30827	13093	15277	15338	35617	35617					0.16005419276598332
SFSRLIRRRLQ	11	Unmodified	_SFSRLIRRRLQ_					0	0	0			REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	477.960026	1430.85825	2.7126	0.0012965	2.1239	0.0010152	4.8365	0.0023117	477.95919211697077	84.184	0.55386	84.184	83.908	84.461	0	-0.0043036	0.0022491	NaN	0.40827	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	441150	+		30828	13093	15277	15338							0.16005419276598332
SFSRLIRRRLQ	11	Unmodified	_SFSRLIRRRLQ_					0	0	0			REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	REV__ENST00000443083.5_1_6:637768-689194:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	477.960026	1430.85825	3.2218	0.0015399	0.27524	0.00013155	3.4971	0.0016715	477.9592251781547	83.871	0.43082	84.135	84.009	84.44	0.26368	-0.053769	-0.00040167	NaN	0.40827	25	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	791060	+		30829	13093	15277	15338							0.16005419276598332
SFSRRRGV	8	Unmodified	_SFSRRRGV_					0	0	0			REV__nc|ENSG00000159140|P18583-2|SON	REV__nc|ENSG00000159140|P18583-2|SON	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1860839724541	3	322.186025	963.536246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.351	1	75.351	74.851	75.851	0								0	0	0	1.0178	1	31370	31370		1.6526	0.58116	1		+		30830	10569	15278	15339	35618	35618					0.05301947317275335
SFSSHYSF	8	Unmodified	_SFSSHYSF_					0	0	0			REV__nc|ENSG00000197808|Q8TAF7-2|ZNF461	REV__nc|ENSG00000197808|Q8TAF7-2|ZNF461	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2074767947197	2	481.20615	960.397747	3.6149	0.0017395	-3.5358	-0.0017014	0.079087	3.8057E-05	481.2053242236219	73.849	0.31259	75.167	74.966	75.279	1.318					31	9	4	0	0	0	0.87276	1	30987	30987		13.508	4.1604	1	2217900	+		30831	11690	15279	15340	35619	35619					-0.08403640441713378
SFSSHYSF	8	Unmodified	_SFSSHYSF_					0	0	0			REV__nc|ENSG00000197808|Q8TAF7-2|ZNF461	REV__nc|ENSG00000197808|Q8TAF7-2|ZNF461	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2059509158134	2	481.20615	960.397747	2.4935	0.0011999	-2.1593	-0.0010391	0.33424	0.00016084	481.20534672288886	73.302	0.37481	75.112	74.925	75.3	1.8101					26	11	3	0	0	0	0.87276	1	30750	30750		13.508	3.3245	1	1765900	+		30832	11690	15279	15340	35620	35620					-0.08403640441713378
SFSSKQVIL	9	Unmodified	_SFSSKQVIL_					0	0	0		ENST00000447009.1_1_7:77314455-77325220:-|nuORF	ENST00000447009.1_1_7:77314455-77325220:-|nuORF	ENST00000447009.1_1_7:77314455-77325220:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.2677184939384	2	504.78985	1007.56515	0.50374	0.00025428	0.56437	0.00028489	1.0681	0.00053917	504.79005089419445	51.502	0.46144	53.478	53.311	53.772	1.9753					30	14	3	0	0	0	0.10844	1	21526	21526		11.64	1.4569	1	5745000			30833	6585	15280	15341	35621	35621					0.06166627103038991
SFSYYCNIL	9	Unmodified	_SFSYYCNIL_					0	0	0			REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2523681521416	2	555.252243	1108.48993	2.7431	0.0015231	-3.1076	-0.0017255	-0.36447	-0.00020237	555.2507070495398	79.065	0.4697	80.332	80.034	80.504	1.2668					43	14	4	0	0	0	0.18809	1	33179	33179		34.402	5.9149	1	8586500	+		30834	13717	15281	15342	35622	35622					-0.05997298419697472
SFSYYCNIL	9	Unmodified	_SFSYYCNIL_					0	0	0			REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	REV__ENST00000531971.1_1_11:118656990-118657077:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2526733279228	2	555.252243	1108.48993	2.2537	0.0012514	-2.9777	-0.0016534	-0.72402	-0.00040201	555.2507190457908	78.538	0.46716	80.273	80.07	80.537	1.735					44	14	4	0	0	0	0.25667	1	32912	32912		27.629	5.8822	1	8277600	+		30835	13717	15281	15342	35623	35623					-0.05997298419697472
SFTEVDDAET	10	Unmodified	_SFTEVDDAET_					0	0	0		ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	ENSG00000158158|ENST00000377075|CNNM4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017333865166	3	371.824264	1112.45096	1.8183	0.00067608	-1.6225	-0.00060327	0.19581	7.2806E-05	371.82333737186167	79.355	0.2188	80.622	80.504	80.723	1.2668					11	6	2	0	0	0	0.12559	1	33320	33320		0.77653	0	1	563110			30836	3492	15282	15343	35624	35624					-0.10076352240389497
SFTYNNWSFF	10	Unmodified	_SFTYNNWSFF_					0	0	0			REV__nc|ENSG00000123901|Q9NYM4-2|GPR83	REV__nc|ENSG00000123901|Q9NYM4-2|GPR83	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.7866699099541	2	656.785296	1311.55604	4.8862	0.0032092	-3.2545	-0.0021375	1.6317	0.0010717	656.7832814671546	89.662	0.40253	90.682	90.429	90.831	1.0199					36	12	4	0	0	0	0.16044	1	37795	37795		53.833	13.883	1	4738900	+		30837	9627	15283	15344	35625	35625					-0.0872776625330971
SFVNGYAAF	9	Unmodified	_SFVNGYAAF_					0	0	0			REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF	REV__ENST00000505303.5_1_5:110428043-110447004:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2339355349541	2	488.232168	974.449782	1.8828	0.00091925	2.212	0.00108	4.0948	0.0019992	488.2326481044167	67.184	0.35968	68.573	68.376	68.735	1.3888					28	11	3	0	0	0	0.15635	1	28173	28173		37.974	3.8716	1	6762600	+		30838	9925	15284	15345	35626	35626					-0.03846477027968831
SFVNIKIRW	9	Unmodified	_SFVNIKIRW_					0	0	0			REV__tr|A0A7D6ZHE0|A0A7D6ZHE0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22620PE=4SV=1	REV__tr|A0A7D6ZHE0|A0A7D6ZHE0_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22620PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2307311892509	3	388.229231	1161.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.015	1	99.241	98.741	99.741	0.22545								0	0	0	0.42693	1	41665	41665		1.1933	0	1		+		30839	15648	15285	15346	35627	35627					0.09149703876573767
SGACCCCC	8	Unmodified	_SGACCCCC_					0	0	0			REV__ENSG00000206579|ENST00000327381|XKR4	REV__ENSG00000206579|ENST00000327381|XKR4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	749.4640380740166	1	749.154369	748.147093	2.7277	0.0020435	-0.15372	-0.00011516	2.574	0.0019283	749.154873986034	98.615	0.088516	98.871	98.825	98.914	0.25636					4	2	2	0	0	0	2.3239	1	41509	41509		0	0	1	891190	+		30840	11829	15286	15347	35628	35628					-0.2370546661785511
SGCSYGSS	8	Unmodified	_SGCSYGSS_					0	0	0			REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.1349670290947	2	374.134336	746.254119	0.057118	2.137E-05	-1.0204	-0.00038175	-0.96324	-0.00036038	374.1339267782442	83.832	0.61617	83.832	83.566	84.182	0					38	19	3	0	0	0	0.89178	1	35003	35003		0.69038	0	1	2381200	+		30841	12957	15287	15348	35629	35629					-0.1291581054430253
SGCSYGSS	8	Unmodified	_SGCSYGSS_					0	0	0			REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1347534060478	2	374.134336	746.254119	2.2512	0.00084223	-0.81659	-0.00030551	1.4346	0.00053672	374.1338297264623	83.67	0.79951	83.941	83.553	84.353	0.27029					44	25	3	0	0	0	0.89178	1	35025	35025		0.69038	0	1	1901800	+		30842	12957	15287	15348	35630	35630					-0.1291581054430253
SGCSYGSS	8	Unmodified	_SGCSYGSS_					0	0	0			REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	REV__ENST00000418231.2_1_X:73350641-73351442:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1346008181572	2	374.134336	746.254119	1.9734	0.00073833	-0.16681	-6.241E-05	1.8066	0.00067592	374.1339022340471	82.875	0.46082	84.088	83.858	84.319	1.2125					33	14	3	0	0	0	0.89178	1	34768	34768		0.69038	0	1	2136500	+		30843	12957	15287	15348	35631	35631					-0.1291581054430253
SGDSRRPR	8	Unmodified	_SGDSRRPR_					0	0	0		ENST00000442035.5_1_X:47053230-47053383:+|nuORF	ENST00000442035.5_1_X:47053230-47053383:+|nuORF	ENST00000442035.5_1_X:47053230-47053383:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7476989626884	2	465.746839	929.479125	3.8618	0.0017986	0.15079	7.0231E-05	4.0126	0.0018689	465.7465716256921	86.728	0.85979	87.82	87.381	88.241	1.0918					81	31	3	0	0	0	0.89008	1	36506	36506		2.5775	0	1	57769000			30844	6562	15288	15349	35632	35632					0.011564800409018972
SGEGGRPN	8	Unmodified	_SGEGGRPN_					0	0	0			REV__ENSG00000275793|ENST00000619918|RIMBP3	REV__ENSG00000275793|ENST00000619918|RIMBP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	387.1798278689384	2	387.180466	772.34638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.05	1	105.05	104.55	105.55	0								0	0	0	1.0178	1	44502	44502		0.69038	0	1		+		30845	11382	15289	15350	35633	35633					-0.048899644157700095
SGEGGRPN	8	Unmodified	_SGEGGRPN_					0	0	0			REV__ENSG00000275793|ENST00000619918|RIMBP3	REV__ENSG00000275793|ENST00000619918|RIMBP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	387.1798583865166	2	387.180466	772.34638	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.02	1	105.08	104.58	105.58	0.056801								0	0	0	1.0178	1	44437	44437		0.69038	0	1		+		30846	11382	15289	15350	35634	35634					-0.048899644157700095
SGEKNEIILEE	11	Unmodified	_SGEKNEIILEE_					0	0	0			REV__tr|A0A553SPA3|A0A553SPA3_NIACISigma-EprocessingpeptidaseSpoIIGAOS=NialliacirculansOX=1397GN=spoIIGAPE=4SV=1	REV__tr|A0A553SPA3|A0A553SPA3_NIACISigma-EprocessingpeptidaseSpoIIGAOS=NialliacirculansOX=1397GN=spoIIGAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.2185241580009	3	420.882114	1259.62451	2.9432	0.0012387	1.7651	0.00074288	4.7082	0.0019816	420.88334932571803	92.358	0.43076	92.526	92.314	92.744	0.16834					36	13	4	0	0	0	0.99848	1	38664	38664		1.7824	0.45278	1	2023800	+		30847	15079	15290	15351	35635	35635					0.0050843353592426865
SGEVPRPQMCS	11	Unmodified	_SGEVPRPQMCS_					0	0	0		ENSG00000204928|ENST00000377976|GRXCR2	ENSG00000204928|ENST00000377976|GRXCR2	ENSG00000204928|ENST00000377976|GRXCR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.7690307497978	2	595.768265	1189.52198	2.1124	0.0012585	-0.37298	-0.00022221	1.7394	0.0010363	595.7679929543822	41.85	0.55415	43.178	42.91	43.464	1.3274					47	17	3	0	0	0	0.58697	2	17499	17499;17601		21.537	9.2963	1	5631200			30848	5165	15291	15352	35636;35637	35636					-0.06520254008205484
SGEVPRPQMCS	11	Unmodified	_SGEVPRPQMCS_					0	0	0		ENSG00000204928|ENST00000377976|GRXCR2	ENSG00000204928|ENST00000377976|GRXCR2	ENSG00000204928|ENST00000377976|GRXCR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.7693359255791	2	595.768265	1189.52198	1.9559	0.0011652	-1.0145	-0.0006044	0.94139	0.00056085	595.7677359787264	41.407	0.48482	43.3	43.024	43.508	1.8927					42	15	3	0	0	0	0.77451	2	17290	17290;17392		16.149	2.6412	1	5332300			30849	5165	15291	15352	35638;35639	35638					-0.06520254008205484
SGFSCTSSFC	10	Unmodified	_SGFSCTSSFC_					0	0	0			REV__ENST00000476408.1_1_1:111434061-111435009:+|nuORF	REV__ENST00000476408.1_1_1:111434061-111435009:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.4634277224541	3	342.461616	1024.36302	2.2066	0.00075568	-1.5103	-0.00051723	0.69627	0.00023845	342.46237913854156	72.464	0.37456	74.274	74.105	74.48	1.8101					49	11	6	0	0	0	0.89588	1	30416	30416		1.9064	0.062138	1	3366000	+		30850	13315	15292	15353	35640	35640					-0.14818967636324487
SGGAGVHG	8	Unmodified	_SGGAGVHG_					0	0	0			REV__ENST00000460934.1_1_1:205628364-205631520:-|nuORF	REV__ENST00000460934.1_1_1:205628364-205631520:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	321.1556884646416	2	321.15372	640.292888	2.4956	0.00080148	-1.1904	-0.0003823	1.3053	0.00041919	321.15510582431057	86.702	1.1592	87.794	87.452	88.612	1.0918					151	40	6	0	0	0	0.89176	3	36518	36518;36610;36661		0.79363	0	1	52414000	+		30851	10560	15293	15354	35641;35642;35643	35641					-0.04164717127616768
SGGCHSSE	8	Unmodified	_SGGCHSSE_					0	0	0		ENSG00000215252|ENST00000683415|GOLGA8B;ENSG00000175265|ENST00000359187|GOLGA8A	ENSG00000215252|ENST00000683415|GOLGA8B	ENSG00000215252|ENST00000683415|GOLGA8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	763.2681152224541	1	763.267543	762.260267	2.526	0.001928	-2.9697	-0.0022667	-0.44368	-0.00033864	763.2655485266309	104.8	0.09201	104.96	104.92	105.01	0.16055					11	4	4	0	0	0	0.89008	1	44501	44501		2.5775	0	1	76096000			30852	4364	15294	15355	35644	35644					-0.13037292312776572
SGGCHSSE	8	Unmodified	_SGGCHSSE_					0	0	0		ENSG00000215252|ENST00000683415|GOLGA8B;ENSG00000175265|ENST00000359187|GOLGA8A	ENSG00000215252|ENST00000683415|GOLGA8B	ENSG00000215252|ENST00000683415|GOLGA8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	763.2671386599541	1	763.267543	762.260267	2.7714	0.0021154	-4.4852	-0.0034234	-1.7138	-0.0013081	763.2646466485503	104.78	0.073662	104.94	104.9	104.97	0.16679					11	3	4	0	0	0	0.89008	1	44423	44423		2.5775	0	1	47614000			30853	4364	15294	15355	35645	35645					-0.13037292312776572
SGGCHSSE	8	Unmodified	_SGGCHSSE_					0	0	0		ENSG00000215252|ENST00000683415|GOLGA8B;ENSG00000175265|ENST00000359187|GOLGA8A	ENSG00000215252|ENST00000683415|GOLGA8B	ENSG00000215252|ENST00000683415|GOLGA8B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	763.267543	762.260267	1.3359	0.0010196	-1.6409	-0.0012525	-0.30507	-0.00023285	763.2665505918861	104.87	0.074341	104.87	104.83	104.9	0	-0.047534	0.00087388	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9679600			30854	4364	15294	15355							-0.13037292312776572
SGGCHSSE	8	Unmodified	_SGGCHSSE_					0	0	0		ENSG00000215252|ENST00000683415|GOLGA8B;ENSG00000175265|ENST00000359187|GOLGA8A	ENSG00000215252|ENST00000683415|GOLGA8B	ENSG00000215252|ENST00000683415|GOLGA8B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	763.267543	762.260267	2.733	0.002086	-2.2686	-0.0017315	0.46441	0.00035447	763.2656003693954	104.84	0.058105	104.9	104.85	104.91	0.056801	-0.018716	0.00039482	NaN	2.5775	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6831200			30855	4364	15294	15355							-0.13037292312776572
SGGCPAGA	8	Unmodified	_SGGCPAGA_					0	0	0		nc|ENSG00000138639|Q8N264-2|ARHGAP24	nc|ENSG00000138639|Q8N264-2|ARHGAP24	nc|ENSG00000138639|Q8N264-2|ARHGAP24	MSMS	GG20161007_CRH_Patient100_A02_01	1	310.1270629763603	2	310.128857	618.24316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.47	1	100.47	99.965	100.97	0								0	0	0	1.0178	1	42057	42057		0.79363	0	1				30856	7882	15295	15356	35646	35646					-0.08123168127929148
SGGCPAGA	8	Unmodified	_SGGCPAGA_					0	0	0		nc|ENSG00000138639|Q8N264-2|ARHGAP24	nc|ENSG00000138639|Q8N264-2|ARHGAP24	nc|ENSG00000138639|Q8N264-2|ARHGAP24	MSMS	GG20161007_CRH_Patient100_A02_01	1	310.1271240115166	2	310.128857	618.24316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.56	1	100.56	100.06	101.06	0								0	0	0	1.0178	1	42095	42095		0.79363	0	1				30857	7882	15295	15356	35647	35647					-0.08123168127929148
SGGCPPDD	8	Unmodified	_SGGCPPDD_					0	0	0		ENSG00000175121|ENST00000372789|WFDC5;nc|ENSG00000175121|Q8TCV5|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	374.1338073611259	2	374.134336	746.254119	0.057118	2.137E-05	-1.0204	-0.00038175	-0.96324	-0.00036038	374.1339267782442	83.832	0.61617	83.832	83.566	84.182	0					38	19	3	0	0	0	0.89198	1	34905	34905		0	0	1	2381200			30858	4356	15296	15357	35648	35648					-0.129158105443139
SGGCPPDD	8	Unmodified	_SGGCPPDD_					0	0	0		ENSG00000175121|ENST00000372789|WFDC5;nc|ENSG00000175121|Q8TCV5|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.1351806521416	2	374.134336	746.254119	2.2512	0.00084223	-0.81659	-0.00030551	1.4346	0.00053672	374.1338297264623	83.67	0.79951	83.941	83.553	84.353	0.27029					44	25	3	0	0	0	0.89198	1	34974	34974		0	0	1	1901800			30859	4356	15296	15357	35649	35649					-0.129158105443139
SGGCPPDD	8	Unmodified	_SGGCPPDD_					0	0	0		ENSG00000175121|ENST00000372789|WFDC5;nc|ENSG00000175121|Q8TCV5|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.1349365115166	2	374.134336	746.254119	1.5696	0.00058726	-2.8422	-0.0010634	-1.2725	-0.0004761	374.1333670438859	75.904	0.63757	77.198	76.881	77.519	1.2938					48	20	3	0	0	0	0.89178	3	31822	31822;31873;31951		0.69038	0	1	1947900			30860	4356	15296	15357	35650;35651;35652	35650					-0.129158105443139
SGGCPPDD	8	Unmodified	_SGGCPPDD_					0	0	0		ENSG00000175121|ENST00000372789|WFDC5;nc|ENSG00000175121|Q8TCV5|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	ENSG00000175121|ENST00000372789|WFDC5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	374.134336	746.254119	2.4315	0.00090972	-4.5407	-0.0016988	-2.1092	-0.00078913	374.13283487511814	75.524	0.63255	77.306	77.009	77.641	1.7817	0.054097	-0.00062243	NaN	0.69038	39	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1473600			30861	4356	15296	15357							-0.129158105443139
SGGDGGWD	8	Unmodified	_SGGDGGWD_					0	0	0		ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	376.2342101931572	2	375.6381	749.261647	2.2592	0.00084865	-3.6069	-0.0013549	-1.3476	-0.00050623	375.63684046018926	83.64	0.39609	83.91	83.739	84.135	0.27029					17	12	2	0	0	0	2.3239	1	35037	35037		0	0	1	698580			30862	7138	15297	15358	35653	35653					-0.12301334952383058
SGGDGGWD	8	Unmodified	_SGGDGGWD_					0	0	0		ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	376.2335693240166	2	375.6381	749.261647	2.5998	0.00097658	-3.857	-0.0014489	-1.2572	-0.00047227	375.6373177777121	82.596	0.34002	84.266	84.017	84.358	1.67					24	10	3	0	0	0	2.3239	1	34549	34549		0	0	1	625090			30863	7138	15297	15358	35654	35654					-0.12301334952383058
SGGDGGWD	8	Unmodified	_SGGDGGWD_					0	0	0		ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	375.6381	749.261647	0.096284	3.6168E-05	-1.6761	-0.00062959	-1.5798	-0.00059342	375.63752407602806	83.847	0.39983	83.847	83.658	84.058	0	-0.18206	0.00091544	NaN	0	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	906630			30864	7138	15297	15358							-0.12301334952383058
SGGDGGWD	8	Unmodified	_SGGDGGWD_					0	0	0		ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	ENST00000527407.5_1_10:116853303-116853399:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	375.6381	749.261647	1.9974	0.00075029	-4.4273	-0.001663	-2.4299	-0.00091276	375.6374197320897	82.882	0.3351	84.095	83.951	84.286	1.2125	0.06539	-0.0011515	NaN	0	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930320			30865	7138	15297	15358							-0.12301334952383058
SGGEKAPQ	8	Unmodified	_SGGEKAPQ_					0	0	0			REV__ENSG00000109436|ENST00000442267|TBC1D9	REV__ENSG00000109436|ENST00000442267|TBC1D9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	773.3798705935478	1	773.378808	772.371532	2.7393	0.0021185	-1.3896	-0.0010747	1.3497	0.0010438	773.3775609328144	104.64	0.11838	104.7	104.62	104.74	0.056801					19	5	5	0	0	0	0.89178	1	44165	44165		0.69038	0	1	1017599999.9999999	+		30866	9271	15298	15359	35655	35655					-0.023759096131925617
SGGEKAPQ	8	Unmodified	_SGGEKAPQ_					0	0	0			REV__ENSG00000109436|ENST00000442267|TBC1D9	REV__ENSG00000109436|ENST00000442267|TBC1D9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	773.3793212771416	1	773.378808	772.371532	2.5928	0.0020052	-1.5159	-0.0011724	1.0769	0.00083282	773.3776232567251	104.6	0.12735	104.76	104.7	104.82	0.16055					24	6	5	0	0	0	0.89178	1	44343	44343		0.69038	0	1	3816999999.9999995	+		30867	9271	15298	15359	35656	35656					-0.023759096131925617
SGGERALT	8	Unmodified	_SGGERALT_					0	0	0		tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	790.4056884646416	1	790.405357	789.398081	1.2965	0.0010248	-0.69787	-0.0005516	0.59865	0.00047318	790.404581198822	104.67	0.115	104.67	104.6	104.72	0					18	5	5	0	0	0	0.89178	1	44223	44223		0.69038	0	1	351840000			30868	16448	15299	15360	35657	35657					-0.005042207218707517
SGGERALT	8	Unmodified	_SGGERALT_					0	0	0		tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	790.4061767458916	1	790.405357	789.398081	2.7493	0.0021731	-1.5973	-0.0012625	1.152	0.00091055	790.4038980478094	104.64	0.11838	104.7	104.62	104.74	0.056801					16	5	4	0	0	0	0.89178	1	44166	44166		0.69038	0	1	635970000			30869	16448	15299	15360	35658	35658					-0.005042207218707517
SGGERALT	8	Unmodified	_SGGERALT_					0	0	0		tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	790.4055053591728	1	790.405357	789.398081	2.687	0.0021238	-2.5108	-0.0019845	0.17618	0.00013925	790.4031541811398	104.62	0.12735	104.78	104.7	104.82	0.16055					20	6	4	0	0	0	0.89178	1	44342	44342		0.69038	0	1	1311600000			30870	16448	15299	15360	35659	35659					-0.005042207218707517
SGGERALT	8	Unmodified	_SGGERALT_					0	0	0		tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	tr|A0A553SP32|A0A553SP32_NIACIChromosomepartitionproteinSmcOS=NialliacirculansOX=1397GN=smcPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	790.4059936404228	1	790.405357	789.398081	2.8608	0.0022612	-2.8334	-0.0022395	0.027438	2.1687E-05	790.40297062293	104.55	0.098694	104.73	104.67	104.77	0.1731					15	4	4	0	0	0	0.89178	1	44252	44252		0.69038	0	1	1132500000			30871	16448	15299	15360	35660	35660					-0.005042207218707517
SGGEWAGAGAL	11	Unmodified	_SGGEWAGAGAL_					0	0	0		ENST00000443185.6_1_18:74071978-74072179:-|nuORF	ENST00000443185.6_1_18:74071978-74072179:-|nuORF	ENST00000443185.6_1_18:74071978-74072179:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.7331115603447	2	488.230156	974.445759	3.9583	0.0019326	-2.4958	-0.0012185	1.4625	0.00071406	488.22848594324864	96.259	0.27725	96.68	96.541	96.818	0.4212					22	8	3	0	0	0	0.85967	1	40493	40493		12.241	1.4167	1	24467000			30872	6570	15300	15361	35661	35661					-0.04248566521664543
SGGFPCAH	8	Unmodified	_SGGFPCAH_					0	0	0			REV__DGCR8|p.D170Rfs*5|1|0.15|ENSG00000128191|chr22:20086468-20086475|GGTGACGG/-|frameshift_variant	REV__DGCR8|p.D170Rfs*5|1|0.15|ENSG00000128191|chr22:20086468-20086475|GGTGACGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1653015017509	2	388.163231	774.311908	3.0341	0.0011777	-0.054543	-2.1172E-05	2.9795	0.0011565	388.1632346623767	101.85	0.17747	102.04	101.91	102.08	0.19076					6	5	2	0	0	0	0.89008	1	42834	42834		2.5775	0	1	1507100	+		30873	8439	15301	15362	35662	35662					-0.08427503828227145
SGGGGFHFV	9	Unmodified	_SGGGGFHFV_					0	0	0		ENST00000491553.1_1_4:38016582-38022367:+|nuORF;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1;ENSG00000065882|ENST00000698857|TBC1D1	ENST00000491553.1_1_4:38016582-38022367:+|nuORF	ENST00000491553.1_1_4:38016582-38022367:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	432.7038452029228	2	432.703577	863.392602	1.6369	0.00070828	0.41145	0.00017804	2.0483	0.00088632	432.70349145572334	70.253	0.54221	70.575	70.288	70.83	0.32224					45	17	3	0	0	0	0.76456	1	29446	29446		4.756	2.6963	1	24528000			30874	794	15302	15363	35663	35663					-0.04455899513664008
SGGGGFHFV	9	Unmodified	_SGGGGFHFV_					0	0	0		ENST00000491553.1_1_4:38016582-38022367:+|nuORF;nc|ENSG00000065882|Q86TI0-2|TBC1D1;nc|ENSG00000065882|Q86TI0|TBC1D1;ENSG00000065882|ENST00000698857|TBC1D1	ENST00000491553.1_1_4:38016582-38022367:+|nuORF	ENST00000491553.1_1_4:38016582-38022367:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	432.703577	863.392602	0.99063	0.00042865	0.29073	0.0001258	1.2814	0.00055445	432.70349482403253	70.492	0.60019	70.492	70.179	70.78	0	-0.14805	-0.00064458	NaN	4.756	51	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40797000			30875	794	15302	15363							-0.04455899513664008
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	608.3868896365166	1	608.2093	607.202024	2.294	0.0013952	-2.1283	-0.0012945	0.16566	0.00010076	608.210322537024	52.464	0.94492	52.464	52.161	53.106	0					48	29	2	0	0	0	0.11957	1	21816	21816		0	0	1	825850	+		30876	10507	15303	15364	35664	35664					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	608.3863403201103	1	608.2093	607.202024	2.3164	0.0014088	-0.43966	-0.0002674	1.8767	0.0011414	608.2113724280978	51.701	0.59249	51.701	51.354	51.947	0					34	18	2	0	0	0	0.11957	1	21659	21659		0	0	1	716750	+		30877	10507	15303	15364	35665	35665					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	609.2089111208916	1	608.2093	607.202024	1.7146	0.0010428	-1.4865	-0.0009041	0.22807	0.00013872	608.2107089946353	53.047	2.6699	53.37	52.188	54.858	0.32283					148	88	2	0	0	0	0.85403	1	22347	22347		0	0	1	1185900	+		30878	10507	15303	15364	35666	35666					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	608.2123901247978	1	608.2093	607.202024	2.0862	0.0012688	-0.87934	-0.00053482	1.2068	0.00073401	608.2110641766386	60.069	1.488	60.397	60.213	61.701	0.32809					81	47	2	0	0	0	0.85403	1	25381	25381		0	0	1	1178400	+		30879	10507	15303	15364	35667	35667					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	608.2124511599541	1	608.2093	607.202024	2.3554	0.0014326	-2.0021	-0.0012177	0.35332	0.00021489	608.2098734089691	75.475	2.9929	75.796	73.491	76.484	0.32163					154	95	2	0	0	0	0.85403	1	31157	31157		0	0	1	715920	+		30880	10507	15303	15364	35668	35668					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	608.3857910037041	1	608.2093	607.202024	1.7146	0.0010428	-1.4865	-0.0009041	0.22807	0.00013872	608.2107089946353	53.047	2.6699	53.37	52.188	54.858	0.32283					148	88	2	0	0	0	0.11957	1	21735	21735		0	0	1	1185900	+		30881	10507	15303	15364	35669	35669					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.2129394412041	1	608.2093	607.202024	2.2191	0.0013497	-1.8277	-0.0011116	0.39143	0.00023807	608.2104122390822	39.882	1.756	41.192	39.909	41.665	1.3102					83	57	2	0	0	0	0.85403	1	16546	16546		0	0	1	898620	+		30882	10507	15303	15364	35670	35670					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.8619262576103	1	608.2093	607.202024	2.2191	0.0013497	-1.8277	-0.0011116	0.39143	0.00023807	608.2104122390822	39.882	1.756	41.192	39.909	41.665	1.3102					83	57	2	0	0	0	0.11957	1	16197	16197		0	0	1	898620	+		30883	10507	15303	15364	35671	35671					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	607.7566406130791	1	608.2093	607.202024	2.8774	0.00175	-2.0556	-0.0012503	0.82173	0.00049978	608.2101508477637	62.697	0.75736	64.111	63.869	64.626	1.4134					46	24	2	0	0	0	0.11957	1	26335	26335		0	0	1	744040	+		30884	10507	15303	15364	35672	35672					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.8035766482353	1	608.2093	607.202024	1.5745	0.00095765	-2.7527	-0.0016742	-1.1781	-0.00071656	608.2100919597635	54.713	0.30766	56.118	55.964	56.272	1.4048					11	9	2	0	0	0	0.11957	1	22861	22861		0	0	1	565510	+		30885	10507	15303	15364	35673	35673					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.8492919802666	1	608.2093	607.202024	1.1534	0.00070151	-1.8911	-0.0011502	-0.73767	-0.00044866	608.2101820128906	57.189	0.3938	58.604	58.4	58.794	1.4145					15	13	2	0	0	0	0.11957	1	24016	24016		0	0	1	648700	+		30886	10507	15303	15364	35674	35674					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	609.0032226443291	1	608.2093	607.202024	2.8568	0.0017375	-1.3757	-0.00083673	1.4811	0.00090082	608.2105032165954	65.538	1.7565	66.937	65.583	67.34	1.3989					80	56	2	0	0	0	0.11957	1	27439	27439		0	0	1	549330	+		30887	10507	15303	15364	35675	35675					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.8445922732353	1	608.2093	607.202024	4.7201	0.0028708	-2.4183	-0.0014709	2.3018	0.0014	608.209694434275	90.035	0.84921	91.054	90.556	91.405	1.0199					33	26	2	0	0	0	0.11957	1	38019	38019		0	0	1	425890	+		30888	10507	15303	15364	35676	35676					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.8439208865166	1	608.2093	607.202024	3.2508	0.0019772	-0.53494	-0.00032535	2.7159	0.0016518	608.2106129509833	94.264	0.72129	95.453	95.174	95.895	1.1887					31	22	2	0	0	0	0.11957	1	39550	39550		0	0	1	429990	+		30889	10507	15303	15364	35677	35677					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.8620483279228	1	608.2093	607.202024	0.85975	0.0005229	-1.8877	-0.0011481	-1.0279	-0.00062518	608.2105255488013	37.972	0.36159	39.793	39.548	39.91	1.8202					15	11	2	0	0	0	0.11957	1	15943	15943		0	0	1	710340	+		30890	10507	15303	15364	35678	35678					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.8044311404228	1	608.2093	607.202024	1.812	0.0011021	-1.3224	-0.00080432	0.48957	0.00029776	608.2102372098129	54.145	0.28568	56.114	56.001	56.287	1.9684					14	8	2	0	0	0	0.11957	1	22664	22664		0	0	1	532230	+		30891	10507	15303	15364	35679	35679					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.8468505740166	1	608.2093	607.202024	4.6643	0.0028369	-0.23181	-0.00014099	4.4325	0.0026959	608.210851548424	88.012	0.73335	89.459	89.188	89.921	1.4467					29	22	2	0	0	0	0.11957	1	37090	37090		0	0	1	514010	+		30892	10507	15303	15364	35680	35680					-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.2148	0.0013471	-3.6039	-0.0021919	-1.3891	-0.00084483	608.208972430801	55.846	0.31389	55.846	55.656	55.97	0	-0.18027	-0.00060268	NaN	0	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	547710	+		30893	10507	15303	15364							-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.0252	0.0012318	-2.6697	-0.0016237	-0.64444	-0.00039195	608.209447197869	67.151	1.374	67.151	66.415	67.789	0	0.10703	-0.00040812	NaN	0	74	43	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	694580	+		30894	10507	15303	15364							-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.2625	0.0013761	-1.9201	-0.0011678	0.34241	0.00020826	608.2101787397987	53.503	1.2719	53.503	53.176	54.448	0	0.066395	-0.00016979	NaN	0	70	42	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	964740	+		30895	10507	15303	15364							-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	608.2093	607.202024	2.0041	0.0012189	-1.218	-0.00074081	0.78611	0.00047812	608.2108438906937	39.723	2.3889	39.723	38.82	41.209	0	-0.034916	4.5951E-05	NaN	0	117	76	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	868070	+		30896	10507	15303	15364							-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	608.2093	607.202024	2.3554	0.0014326	-2.0021	-0.0012177	0.35332	0.00021489	608.2098734089691	75.475	2.9929	75.796	73.491	76.484	0.32163	0.19734	-4.1819E-05	NaN	0	154	95	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	715920	+		30897	10507	15303	15364							-0.11728929167406932
SGGGGGGCG	9	Unmodified	_SGGGGGGCG_					0	0	0			REV__ENSG00000156017|ENST00000376834|CARNMT1	REV__ENSG00000156017|ENST00000376834|CARNMT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	608.2093	607.202024	2.0862	0.0012688	-0.87934	-0.00053482	1.2068	0.00073401	608.2110641766386	60.069	1.488	60.397	60.213	61.701	0.32809	0	0	NaN	0	81	47	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1178400	+		30898	10507	15303	15364							-0.11728929167406932
SGGGGGGGGC	10	Unmodified	_SGGGGGGGGC_					0	0	0		KRT10|p.R370Qfs*9|1|0.05|ENSG00000186395|chr17:40820074-40820095|ATCTCCAGAGCTTGTACATTAC/-|frameshift_variant;ENSG00000186395|ENST00000269576|KRT10;CON__P13645	KRT10|p.R370Qfs*9|1|0.05|ENSG00000186395|chr17:40820074-40820095|ATCTCCAGAGCTTGTACATTAC/-|frameshift_variant	KRT10|p.R370Qfs*9|1|0.05|ENSG00000186395|chr17:40820074-40820095|ATCTCCAGAGCTTGTACATTAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	333.1186096072197	2	333.11902	664.223487	2.1833	0.00072729	-3.2533	-0.0010838	-1.0701	-0.00035646	333.11789054446194	102.28	0.16768	102.34	102.24	102.41	0.062813					9	5	2	0	0	0	0.89803	1	42824	42824		0	0	1	8916500		+	30899	348	15304	15365	35681	35681					-0.12205544138691948
SGGGYGGH	8	Unmodified	_SGGGYGGH_					0	0	0			REV__ENST00000587928.5_1_19:10794459-10799985:+|nuORF	REV__ENST00000587928.5_1_19:10794459-10799985:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.1429015994072	2	346.143353	690.272152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.40806	1	0.5665	0.066503	1.0665	0.15844								0	0	0	1.0178	1	168	168		5.7604	3.1829	1		+		30900	9755	15305	15366	35682	35682					-0.08537307507288006
SGGRLPGH	8	Unmodified	_SGGRLPGH_					0	0	0		IRS1|p.M733Ifs*27|1|0.06|ENSG00000169047|chr2:226796540-226796541|-/AAAGAAAAAAAGGATA|frameshift_variant;IRS1|p.S794Afs*149|1|0.14|ENSG00000169047|chr2:226796360-226796360|A/-|frameshift_variant;ENSG00000169047|ENST00000305123|IRS1	IRS1|p.M733Ifs*27|1|0.06|ENSG00000169047|chr2:226796540-226796541|-/AAAGAAAAAAAGGATA|frameshift_variant	IRS1|p.M733Ifs*27|1|0.06|ENSG00000169047|chr2:226796540-226796541|-/AAAGAAAAAAAGGATA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2839843630791	2	390.709194	779.403835	-0.49664	-0.00019404	3.8605	0.0015083	3.3638	0.0013143	390.71082907355753	14.765	0.15399	15.535	15.457	15.611	0.76937					6	4	2	0	0	0	2.3239	1	6139	6139		0.69038	0.69038	1	443830			30901	4066	15306	15367	35683	35683					0.005309225804694506
SGGSDPDC	8	Unmodified	_SGGSDPDC_					0	0	0			REV__ENSG00000149115|ENST00000358252|TNKS1BP1	REV__ENSG00000149115|ENST00000358252|TNKS1BP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	369.1220886111259	2	369.123968	736.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1609	1	4.1609	3.6609	4.6609	0								0	0	0	1.0178	1	1711	1711		0	0	1		+		30902	10358	15307	15368	35684	35684					-0.14528400923973095
SGGTGPPP	8	Unmodified	_SGGTGPPP_					0	0	0			REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	335.1646911501884	2	335.163754	668.312954	2.7241	0.00091302	-0.28952	-9.7037E-05	2.4346	0.00081598	335.1637071156564	97.156	0.18832	97.462	97.32	97.508	0.3062					10	6	2	0	0	0	0.89178	1	40851	40851		0.69038	0	1	7131900	+		30903	13121	15308	15369	35685	35685					-0.03446966187664202
SGGTGPPP	8	Unmodified	_SGGTGPPP_					0	0	0			REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	335.163754	668.312954	2.4858	0.00083315	1.1197	0.00037529	3.6055	0.0012084	335.16424061829764	97.24	0.17922	97.524	97.422	97.601	0.28442	0.031143	0.00047058	NaN	0.69038	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6058800	+		30904	13121	15308	15369							-0.03446966187664202
SGGTGPPP	8	Unmodified	_SGGTGPPP_					0	0	0			REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	REV__ENST00000449500.1_1_20:62259621-62259837:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	335.163754	668.312954	2.7241	0.00091302	-0.28952	-9.7037E-05	2.4346	0.00081598	335.1637071156564	97.156	0.18832	97.462	97.32	97.508	0.3062	-0.031143	-0.00047406	NaN	0.69038	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7131900	+		30905	13121	15308	15369							-0.03446966187664202
SGHFSSNWQ	9	Unmodified	_SGHFSSNWQ_					0	0	0			REV__ENST00000310343.13_1_11:128851381-128851786:-|nuORF	REV__ENST00000310343.13_1_11:128851381-128851786:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2266723513603	2	525.225405	1048.43626	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.042	1	45.042	44.542	45.542	0								0	0	0	0.42693	1	18849	18849		3.9444	0	1		+		30906	12360	15309	15370	35686	35686					-0.08602334807210354
SGISYFDYIR	10	Unmodified	_SGISYFDYIR_					0	0	0		tr|A0A7D6VNG5|A0A7D6VNG5_9CLOTBeta-lactamasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15290PE=4SV=1	tr|A0A7D6VNG5|A0A7D6VNG5_9CLOTBeta-lactamasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15290PE=4SV=1	tr|A0A7D6VNG5|A0A7D6VNG5_9CLOTBeta-lactamasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	407.5356628298759	3	407.536389	1219.58734	-0.8613	-0.00035101	-1.185	-0.00048292	-2.0463	-0.00083393	407.87028369729006	11.799	0.33553	11.799	11.605	11.941	0					23	10	3	0	0	0	0.83529	1	4875	4875		8.4443	0.49891	1	1616700			30907	16733	15310	15371	35687	35687					-0.013671932191982705
SGKQPKQV	8	Unmodified	_SGKQPKQV_					0	0	0		ENST00000559020.1_1_1:150940136-150940936:-|nuORF;ENSG00000143418|ENST00000368954|CERS2	ENST00000559020.1_1_1:150940136-150940936:-|nuORF	ENST00000559020.1_1_1:150940136-150940936:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	436.2552062869072	2	436.253434	870.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.953	1	98.181	97.681	98.681	0.22776								0	0	0	1.0178	1	41224	41224		4.756	0	1				30908	3032	15311	15372	35688	35688					0.051889181002820806
SGKRRKKRRHR	11	Unmodified	_SGKRRKKRRHR_					0	0	0		nc|ENSG00000067066|P23497-3|SP100;SP100|p.V830Efs*20|1|0.06|ENSG00000067066|chr2:230541976-230541977|-/AACTCTCCAGAGTCTCTTT|frameshift_variant;nc|ENSG00000067066|P23497|SP100;ENSG00000067066|ENST00000340126|SP100	nc|ENSG00000067066|P23497-3|SP100	nc|ENSG00000067066|P23497-3|SP100	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	366.6652709841728	4	366.98563	1463.91341	2.0594	0.00075577	1.0974	0.00040274	3.1568	0.0011585	366.9861437248811	60.209	0.67113	60.537	60.184	60.856	0.32809					29	21	2	0	0	0	0.14606	1	25104	25104		0.40827	0.31342	1	711910			30909	818	15312	15373	35689	35689					0.2000127058772705
SGKTKKKRKKK	11	Unmodified	_SGKTKKKRKKK_					0	0	0			REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	REV__nc|ENSG00000187624|Q6ZQX7-2|LIAT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.1576415896416	4	329.976673	1315.87759	0.34866	0.00011505	-0.32305	-0.0001066	0.025613	8.4515E-06	330.2273713972617	46.213	0.34361	47.588	47.43	47.773	1.3751					15	10	2	0	0	0	0.14606	1	19334	19334		0	0	1	328520	+		30910	11540	15313	15374	35690	35690					0.23228375567464354
SGLLHRVM	8	Unmodified	_SGLLHRVM_					0	0	0			REV__tr|A0A553SSP5|A0A553SSP5_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_03380PE=3SV=1	REV__tr|A0A553SSP5|A0A553SSP5_NIACIMolybdopterinmolybdenumtransferaseOS=NialliacirculansOX=1397GN=CEQ21_03380PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	456.7304565310478	2	456.75783	911.501106	3.3697	0.0015391	-1.1174	-0.00051038	2.2523	0.0010288	456.75729655826643	82.427	0.31227	84.097	83.892	84.205	1.67					14	9	2	0	0	0	2.3239	1	34504	34504		0.69038	0	1	527410	+		30911	15210	15314	15375	35691	35691					0.04181568465105556
SGLQLSPESIC	11	Unmodified	_SGLQLSPESIC_					0	0	0		ENST00000526137.1_1_11:65405732-65405837:+|nuORF	ENST00000526137.1_1_11:65405732-65405837:+|nuORF	ENST00000526137.1_1_11:65405732-65405837:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2798339724541	2	567.278989	1132.54342	0.91263	0.00051771	-0.8933	-0.00050675	0.019323	1.0961E-05	567.2784557648017	53.341	0.66143	54.741	54.41	55.072	1.4005					94	27	4	0	0	0	0.31168	2	22250	22250;22286		31.268	1.4278	1	132130000			30912	7122	15315	15376	35692;35693	35692					-0.01754545707831312
SGLRRSRRQRR	11	Unmodified	_SGLRRSRRQRR_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	476.6233398318291	3	476.622407	1426.84539	3.825	0.0018231	-1.3572	-0.00064689	2.4678	0.0011762	476.6217424044183	97.489	0.13404	97.774	97.694	97.828	0.28442					10	4	3	0	0	0	1.039	1	41021	41021		0.45452	0	1	13904000	+		30913	11614	15316	15377	35694	35694					0.14904400937052742
SGLRRSRRQRR	11	Unmodified	_SGLRRSRRQRR_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	476.6236755251884	3	476.622407	1426.84539	3.3621	0.0016024	-0.29283	-0.00013957	3.0692	0.0014629	476.6222213746272	97.391	0.1193	97.697	97.625	97.744	0.30619					8	3	3	0	0	0	1.039	1	40960	40960		0.45452	0.37117	1	9464300	+		30914	11614	15316	15377	35695	35695					0.14904400937052742
SGLRRSRRQRR	11	Unmodified	_SGLRRSRRQRR_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	476.622407	1426.84539	3.825	0.0018231	-1.3572	-0.00064689	2.4678	0.0011762	476.6217424044183	97.489	0.13404	97.774	97.694	97.828	0.28442	0.038311	-0.00077714	NaN	0.45452	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13904000	+		30915	11614	15316	15377							0.14904400937052742
SGLRRSRRQRR	11	Unmodified	_SGLRRSRRQRR_					0	0	0			REV__ENSG00000189431|ENST00000529419|RASSF10	REV__ENSG00000189431|ENST00000529419|RASSF10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	476.622407	1426.84539	3.3621	0.0016024	-0.29283	-0.00013957	3.0692	0.0014629	476.6222213746272	97.391	0.1193	97.697	97.625	97.744	0.30619	-0.038311	0.00074481	NaN	0.45452	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9464300	+		30916	11614	15316	15377							0.14904400937052742
SGLVPIGG	8	Unmodified	_SGLVPIGG_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2061950564384	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89176	1	13745	13745		0.79363	0	1	2241600	+		30917	9689	15317	15378	35696	35696					0.03502770260206489
SGLVPIGG	8	Unmodified	_SGLVPIGG_					0	0	0			REV__ENSG00000125999|ENST00000253354|BPIFB1	REV__ENSG00000125999|ENST00000253354|BPIFB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.2054931521416	2	350.205421	698.39629	0.19719	6.9056E-05	1.8771	0.00065738	2.0743	0.00072644	350.2060439158818	25.602	0.37011	27.319	27.213	27.584	1.7167					17	11	2	0	0	0	0.89176	1	10713	10713		0.79363	0	1	985950	+		30918	9689	15317	15378	35697	35697					0.03502770260206489
SGNGVKKP	8	Unmodified	_SGNGVKKP_					0	0	0		ENSG00000100982|ENST00000372409|PCIF1	ENSG00000100982|ENST00000372409|PCIF1	ENSG00000100982|ENST00000372409|PCIF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	786.4465820193291	1	786.446828	785.439552	2.7463	0.0021598	-3.0241	-0.0023783	-0.27778	-0.00021846	786.4443785691489	103.41	0.082611	103.47	103.44	103.52	0.059502					5	3	2	0	0	0	0.89051	1	43373	43373		2.3027	0	1	105120000			30919	1313	15318	15379	35698	35698					0.03824960037468372
SGNGVKKP	8	Unmodified	_SGNGVKKP_					0	0	0		ENSG00000100982|ENST00000372409|PCIF1	ENSG00000100982|ENST00000372409|PCIF1	ENSG00000100982|ENST00000372409|PCIF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	786.4467651247978	1	786.446828	785.439552	2.6684	0.0020985	-2.8959	-0.0022775	-0.22756	-0.00017896	786.4445707206469	103.39	0.10884	103.55	103.51	103.62	0.16445					7	4	2	0	0	0	0.89051	1	43575	43575		2.3027	0	1	484340000			30920	1313	15318	15379	35699	35699					0.03824960037468372
SGPAPVLVA	9	Unmodified	_SGPAPVLVA_					0	0	0			REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	REV__nc|ENSG00000137177|Q9H1H9-3|KIF13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	810.4735595583916	1	810.47198	809.464704	0.36817	0.00029839	1.2546	0.0010168	1.6228	0.0013152	810.4733546536838	30.908	0.28402	32.19	32.028	32.312	1.2825					15	8	3	0	0	0	0.12174	1	12946	12946		42.095	0	1	1110400	+		30921	10014	15319	15380	35700	35700					0.05235014840047825
SGPGGLLV	8	Unmodified	_SGPGGLLV_					0	0	0			REV__nc|ENSG00000138448|P06756-3|ITGAV	REV__nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.2056457400322	2	350.205421	698.39629	-0.014223	-4.981E-06	3.7311	0.0013066	3.7168	0.0013017	350.2063351153567	26.08	0.4063	27.34	27.204	27.61	1.2594					26	12	3	0	0	0	0.88958	1	10982	10982		2.8892	0	1	748150	+		30922	10065	15320	15381	35701	35701					0.035027702601951205
SGPGGLLV	8	Unmodified	_SGPGGLLV_					0	0	0			REV__nc|ENSG00000138448|P06756-3|ITGAV	REV__nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	350.205421	698.39629	0.61138	0.00021411	6.408	0.0022441	7.0194	0.0024582	350.206537470061	27.22	0.43391	27.482	27.266	27.7	0.26173	0.10174	0.0025016	NaN	2.8892	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	684060	+		30923	10065	15320	15381							0.035027702601951205
SGPGGLLV	8	Unmodified	_SGPGGLLV_					0	0	0			REV__nc|ENSG00000138448|P06756-3|ITGAV	REV__nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	350.205421	698.39629	-0.014223	-4.981E-06	3.7311	0.0013066	3.7168	0.0013017	350.2063351153567	26.08	0.4063	27.34	27.204	27.61	1.2594	-0.040582	0.00062664	NaN	2.8892	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	748150	+		30924	10065	15320	15381							0.035027702601951205
SGPGGLLV	8	Unmodified	_SGPGGLLV_					0	0	0			REV__nc|ENSG00000138448|P06756-3|ITGAV	REV__nc|ENSG00000138448|P06756-3|ITGAV	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	350.205421	698.39629	0.19719	6.9056E-05	1.8771	0.00065738	2.0743	0.00072644	350.2060439158818	25.602	0.37011	27.319	27.213	27.584	1.7167	-0.061158	-0.00067187	NaN	2.8892	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	985950	+		30925	10065	15320	15381							0.035027702601951205
SGPLGVMLIV	10	Unmodified	_SGPLGVMLIV_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2888366580009	2	493.291171	984.567789	2.184	0.0010773	-3.3799	-0.0016673	-1.1959	-0.00058994	493.2893120829053	78.257	0.83719	79.992	79.793	80.63	1.735					64	26	4	0	0	0	0.22411	3	32800	32800;32853;32905		46.021	7.8698	1	14127000	+		30926	11859	15321	15382	35702;35703;35704	35702					0.07488759236343867
SGPLGVMLIV	10	Unmodified	_SGPLGVMLIV_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2900878787041	2	493.291171	984.567789	2.282	0.0011257	-2.7599	-0.0013614	-0.47791	-0.00023575	493.289722329038	78.769	0.46412	80.504	80.319	80.784	1.735					27	14	2	0	0	0	0.44465	1	32987	32987		30.637	0.41173	1	2205300	+		30927	11859	15321	15382	35705	35705					0.07488759236343867
SGPLGVMLIV	10	Unmodified	_SGPLGVMLIV_					0	0	0			REV__ENSG00000214753|ENST00000301785|HNRNPUL2	REV__ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	493.291171	984.567789	2.7642	0.0013635	-3.9489	-0.001948	-1.1848	-0.00058444	493.28882707282816	78.709	1.1236	79.976	79.787	80.91	1.2668	-0.0080118	-0.00024093	NaN	46.021	70	35	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7014800	+		30928	11859	15321	15382							0.07488759236343867
SGPLVSIG	8	Unmodified	_SGPLVSIG_					0	0	0			REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2112304568291	2	365.210704	728.406855	0.082758	3.0224E-05	2.2203	0.00081088	2.3031	0.0008411	365.21147456382187	22.688	0.52596	23.903	23.64	24.166	1.2145					25	16	3	0	0	0	0.89051	1	9582	9582		2.3027	0	1	1603700	+		30929	10694	15322	15383	35706	35706					0.031787529146299676
SGPLVSIG	8	Unmodified	_SGPLVSIG_					0	0	0			REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2119933962822	2	365.210704	728.406855	0.31165	0.00011382	3.5257	0.0012876	3.8374	0.0014015	365.2117350635233	24.538	0.18244	25.779	25.641	25.823	1.241					9	5	2	0	0	0	0.88587	1	10270	10270		5.2307	0	1	655780	+		30930	10694	15322	15383	35707	35707					0.031787529146299676
SGPLVSIG	8	Unmodified	_SGPLVSIG_					0	0	0			REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	365.210704	728.406855	-1.4324	-0.00052313	6.1038	0.0022292	4.6714	0.0017061	365.21294478432503	26.072	0.27271	26.072	25.934	26.206	0	0.19089	0.0010417	NaN	5.2307	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	428300	+		30931	10694	15322	15383							0.031787529146299676
SGPLVSIG	8	Unmodified	_SGPLVSIG_					0	0	0			REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	365.210704	728.406855	0.31165	0.00011382	3.5257	0.0012876	3.8374	0.0014015	365.2117350635233	24.538	0.18244	25.779	25.641	25.823	1.241	-0.10257	-0.00084139	NaN	5.2307	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	655780	+		30932	10694	15322	15383							0.031787529146299676
SGPLVSIG	8	Unmodified	_SGPLVSIG_					0	0	0			REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	REV__WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	365.210704	728.406855	0.2234	8.1588E-05	2.078	0.00075889	2.3014	0.00084048	365.21132611893177	24.114	0.21455	25.799	25.692	25.906	1.6845	-0.082653	-0.0018989	NaN	5.2307	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	362750	+		30933	10694	15322	15383							0.031787529146299676
SGPPMTAILE	10	Unmodified	_SGPPMTAILE_					0	0	0		nc|ENSG00000100241|O95248|SBF1;ENSG00000100241|ENST00000380817|SBF1;nc|ENSG00000100241|O95248-4|SBF1	nc|ENSG00000100241|O95248|SBF1	nc|ENSG00000100241|O95248|SBF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	339.1761352419853	3	339.175804	1014.50558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.51	1	102.69	102.19	103.19	0.18066								0	0	0	0.66254	1	43125	43125		0.15932	0	1				30934	1257	15323	15384	35708	35708					-0.0010901190265713012
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.05475	1	0.05475	-0.44525	0.55475	0								0	0	0	0.42693	1	22	22		0.26902	0	1				30935	289	15324	15385	35709	35709					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1419250369072	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.16455	1	0.16455	-0.33545	0.66455	0								0	0	0	0.42693	1	67	67		0.26902	0	1				30936	289	15324	15385	35710	35710					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1419860720634	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.2857	1	0.2857	-0.2143	0.7857	0								0	0	0	0.42693	1	116	116		0.26902	0	1				30937	289	15324	15385	35711	35711					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.38298	1	0.38298	-0.11702	0.88298	0								0	0	0	0.42693	1	156	156		0.26902	0	1				30938	289	15324	15385	35712	35712					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.49028	1	0.49028	-0.0097187	0.99028	0								0	0	0	0.42693	1	200	200		0.26902	0	1				30939	289	15324	15385	35713	35713					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418945193291	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.60076	1	0.60076	0.10076	1.1008	0								0	0	0	0.42693	1	246	246		0.26902	0	1				30940	289	15324	15385	35714	35714					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1421386599541	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.71733	1	0.71733	0.21733	1.2173	0								0	0	0	0.42693	1	294	294		0.26902	0	1				30941	289	15324	15385	35715	35715					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418334841728	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.91281	1	0.91281	0.41281	1.4128	0								0	0	0	0.42693	1	374	374		0.26902	0	1				30942	289	15324	15385	35716	35716					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1417114138603	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0349	1	1.0349	0.53489	1.5349	0								0	0	0	0.42693	1	424	424		0.26902	0	1				30943	289	15324	15385	35717	35717					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2407	1	1.2407	0.74072	1.7407	0								0	0	0	0.42693	1	509	509		0.26902	0	1				30944	289	15324	15385	35718	35718					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418334841728	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4314	1	1.4314	0.93137	1.9314	0								0	0	0	0.42693	1	587	587		0.26902	0	1				30945	289	15324	15385	35719	35719					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1423522830009	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.552	1	1.552	1.052	2.052	0								0	0	0	0.42693	1	638	638		0.26902	0	1				30946	289	15324	15385	35720	35720					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6458	1	1.6458	1.1458	2.1458	0								0	0	0	0.42693	1	676	676		0.26902	0	1				30947	289	15324	15385	35721	35721					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7517	1	1.7517	1.2517	2.2517	0								0	0	0	0.42693	1	719	719		0.26902	0	1				30948	289	15324	15385	35722	35722					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1420471072197	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8643	1	1.8643	1.3643	2.3643	0								0	0	0	0.42693	1	764	764		0.26902	0	1				30949	289	15324	15385	35723	35723					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1421081423759	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9664	1	1.9664	1.4664	2.4664	0								0	0	0	0.42693	1	806	806		0.26902	0	1				30950	289	15324	15385	35724	35724					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1414367556572	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0734	1	2.0734	1.5734	2.5734	0								0	0	0	0.42693	1	850	850		0.26902	0	1				30951	289	15324	15385	35725	35725					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1421081423759	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1763	1	2.1763	1.6763	2.6763	0								0	0	0	0.42693	1	893	893		0.26902	0	1				30952	289	15324	15385	35726	35726					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1420776247978	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2851	1	2.2851	1.7851	2.7851	0								0	0	0	0.42693	1	937	937		0.26902	0	1				30953	289	15324	15385	35727	35727					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1419860720634	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5227	1	2.5227	2.0227	3.0227	0								0	0	0	0.42693	1	1034	1034		0.26902	0	1				30954	289	15324	15385	35728	35728					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7768	1	2.7768	2.2768	3.2768	0								0	0	0	0.42693	1	1138	1138		0.26902	0	1				30955	289	15324	15385	35729	35729					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1419860720634	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8915	1	2.8915	2.3915	3.3915	0								0	0	0	0.42693	1	1185	1185		0.26902	0	1				30956	289	15324	15385	35730	35730					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1417724490166	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9906	1	2.9906	2.4906	3.4906	0								0	0	0	0.42693	1	1226	1226		0.26902	0	1				30957	289	15324	15385	35731	35731					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418334841728	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0826	1	3.0826	2.5826	3.5826	0								0	0	0	0.42693	1	1265	1265		0.26902	0	1				30958	289	15324	15385	35732	35732					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2981	1	3.2981	2.7981	3.7981	0								0	0	0	0.42693	1	1353	1353		0.26902	0	1				30959	289	15324	15385	35733	35733					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4035	1	3.4035	2.9035	3.9035	0								0	0	0	0.42693	1	1397	1397		0.26902	0	1				30960	289	15324	15385	35734	35734					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8436	1	3.8436	3.3436	4.3436	0								0	0	0	0.42693	1	1579	1579		0.26902	0	1				30961	289	15324	15385	35735	35735					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1412536501884	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1946	1	4.1946	3.6946	4.6946	0								0	0	0	0.42693	1	1724	1724		0.26902	0	1				30962	289	15324	15385	35736	35736					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2913	1	4.2913	3.7913	4.7913	0								0	0	0	0.42693	1	1764	1764		0.26902	0	1				30963	289	15324	15385	35737	35737					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1418029665947	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3804	1	4.3804	3.8804	4.8804	0								0	0	0	0.42693	1	1800	1800		0.26902	0	1				30964	289	15324	15385	35738	35738					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6183	1	4.6183	4.1183	5.1183	0								0	0	0	0.42693	1	1897	1897		0.26902	0	1				30965	289	15324	15385	35739	35739					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.53	1	112.53	112.03	113.03	0								0	0	0	0.42693	1	48648	48648		0.26902	0	1				30966	289	15324	15385	35740	35740					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1423217654228	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.64	1	113.64	113.14	114.14	0								0	0	0	0.42693	1	49088	49088		0.26902	0	1				30967	289	15324	15385	35741	35741					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1422607302666	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.9	1	114.9	114.4	115.4	0								0	0	0	0.42693	1	49596	49596		0.26902	0	1				30968	289	15324	15385	35742	35742					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1415893435478	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.54	1	116.54	116.04	117.04	0								0	0	0	0.42693	1	50271	50271		0.26902	0	1				30969	289	15324	15385	35743	35743					-0.04922907841273627
SGQDRGGPQ	9	Unmodified	_SGQDRGGPQ_					0	0	0		chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	chr8:143873298-143878438|407|26.0|0.0|21.31|-|0|EPPK1,EPPK1|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415588259697	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3821	1	2.1305	1.6305	2.6305	0.7484								0	0	0	0.42693	1	571	571		1.1933	0	1				30970	289	15324	15385	35744	35744					-0.04922907841273627
SGRGPGLV	8	Unmodified	_SGRGPGLV_					0	0	0			REV__ENST00000498589.1_3_22:22008447-22015259:+|nuORF	REV__ENST00000498589.1_3_22:22008447-22015259:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	742.4193603396416	1	742.420614	741.413337	2.7204	0.0020197	-4.2196	-0.0031327	-1.4992	-0.0011131	742.4173776791156	103.39	0.12342	103.45	103.42	103.54	0.059502					7	5	2	0	0	0	0.89176	1	43359	43359		0.79363	0	1	126050000	+		30971	13492	15325	15386	35745	35745					0.03228690865989847
SGRKRNIPI	9	Unmodified	_SGRKRNIPI_					0	0	0			REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|34|2|sense	REV__L1PA6_dup2267|chr6:2299837-2303022:+|1.5111882528479883|0.3006554191737456|2.33|429.0|34|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5468322634697	3	347.548964	1039.62506	1.3457	0.0004677	-4.2595	-0.0014804	-2.9138	-0.0010127	347.5477493687869	41.69	0.62015	43.582	43.269	43.889	1.8927					36	19	2	0	0	0	0.70577	1	17393	17393		7.1017	0.89594	1	2826600	+		30972	14312	15326	15387	35746	35746					0.10683362556937936
SGRRPGKK	8	Unmodified	_SGRRPGKK_					0	0	0		nc|ENSG00000009954|Q9UIG0-2|BAZ1B;ENSG00000009954|ENST00000339594|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	nc|ENSG00000009954|Q9UIG0-2|BAZ1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2736694216728	2	443.272493	884.530432	1.9507	0.00086467	0.52554	0.00023296	2.4762	0.0010976	443.27258903239255	68.914	0.59289	69.237	68.876	69.469	0.32223					48	18	4	0	0	0	0.89008	1	28900	28900		2.5775	0	1	10679000			30973	542	15327	15388	35747	35747					0.08354848805606707
SGRVGSGG	8	Unmodified	_SGRVGSGG_					0	0	0		ENST00000333219.8_1_13:111366016-111366232:+|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	REV__ENST00000374979.7_2_11:124644802-124670283:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.6727172732353	2	338.672277	675.330001	2.2239	0.00075317	-1.7537	-0.00059392	0.47021	0.00015925	338.67184024308284	75.461	1.1633	77.243	76.854	78.017	1.7817					112	37	5	0	0	0	0.88587	1	31581	31581		5.2307	0	1	45175000			30974	12708	15328	15389	35748	35748					-0.020650455818554292
SGSHNFRFEI	10	Unmodified	_SGSHNFRFEI_					0	0	0		SIGLEC1|p.Y113H|1|0.1|ENSG00000088827|chr20:3706419-3706419|A/G|missense_variant	SIGLEC1|p.Y113H|1|0.1|ENSG00000088827|chr20:3706419-3706419|A/G|missense_variant	SIGLEC1|p.Y113H|1|0.1|ENSG00000088827|chr20:3706419-3706419|A/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2879516482353	2	597.288537	1192.56252	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.37	1	104.55	104.05	105.05	0.1731								0	0	0	0.66166	1	44141	44141		1.6526	0	1				30975	15956	15329	15390	35749	35749					-0.026058283018983275
SGSVLPLG	8	Unmodified	_SGSVLPLG_					0	0	0		CSF1|p.V497Lfs*50|1|0.22|ENSG00000184371|chr1:109924109-109924110|TG/-|frameshift_variant;ENSG00000184371|ENST00000329608|CSF1	CSF1|p.V497Lfs*50|1|0.22|ENSG00000184371|chr1:109924109-109924110|TG/-|frameshift_variant	CSF1|p.V497Lfs*50|1|0.22|ENSG00000184371|chr1:109924109-109924110|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2110473513603	2	365.210704	728.406855	0.14704	5.3699E-05	2.0905	0.00076346	2.2375	0.00081716	365.2114671636182	22.23	0.40192	23.846	23.61	24.011	1.6158					24	12	3	0	0	0	0.89008	1	9256	9256		2.5775	0	1	1547600			30976	376	15330	15391	35750	35750					0.031787529146299676
SGVPGSLL	8	Unmodified	_SGVPGSLL_					0	0	0		VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant;ENSG00000110799|ENST00000261405|VWF	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.2120544314384	2	365.210704	728.406855	0.56809	0.00020747	3.1468	0.0011492	3.7149	0.0013567	365.2119660520408	23.626	0.37299	23.859	23.69	24.063	0.23306					25	11	3	0	0	0	0.89051	1	9898	9898		2.3027	0	1	835050			30977	1718	15331	15392	35751	35751					0.03178752914618599
SGVPGSLL	8	Unmodified	_SGVPGSLL_					0	0	0		VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant;ENSG00000110799|ENST00000261405|VWF	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2117797732353	2	365.210704	728.406855	0.082758	3.0224E-05	2.2203	0.00081088	2.3031	0.0008411	365.21147456382187	22.688	0.52596	23.903	23.64	24.166	1.2145					25	16	3	0	0	0	0.89051	1	9442	9442		2.3027	0	1	1603700			30978	1718	15331	15392	35752	35752					0.03178752914618599
SGVPGSLL	8	Unmodified	_SGVPGSLL_					0	0	0		VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant;ENSG00000110799|ENST00000261405|VWF	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	365.210704	728.406855	-1.5187	-0.00055466	5.5982	0.0020445	4.0795	0.0014899	365.2126036406789	24.152	0.37292	24.152	23.962	24.335	0	0.11649	0.00093051	NaN	2.3027	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	571530			30979	1718	15331	15392							0.03178752914618599
SGVPGSLL	8	Unmodified	_SGVPGSLL_					0	0	0		VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant;ENSG00000110799|ENST00000261405|VWF	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	VWF|p.D2509Gfs*24|1|0.03|ENSG00000110799|chr12:5971621-5971622|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	365.210704	728.406855	0.16028	5.8536E-05	3.5463	0.0012952	3.7066	0.0013537	365.21193960871096	22.481	0.26782	24.096	24.041	24.309	1.6158	0.060371	-0.00056822	NaN	2.3027	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	828510			30980	1718	15331	15392							0.03178752914618599
SHAAGPHG	8	Unmodified	_SHAAGPHG_					0	0	0			REV__ENSG00000119574|ENST00000594051|ZBTB45	REV__ENSG00000119574|ENST00000594051|ZBTB45	MSMS	GG20161007_CRH_Patient100_A02_01	1	367.1718017458916	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.055	1	50.055	49.555	50.555	0								0	0	0	1.0178	1	20886	20886		0.69038	0	1		+		30981	9545	15332	15393	35753	35753					-0.04653625861999444
SHAAGPHG	8	Unmodified	_SHAAGPHG_					0	0	0			REV__ENSG00000119574|ENST00000594051|ZBTB45	REV__ENSG00000119574|ENST00000594051|ZBTB45	MSMS	GG20161007_CRH_Patient100_W632_02	4	367.1721679568291	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.014	1	49.991	49.491	50.491	1.9772								0	0	0	1.0178	1	20110	20110		0.69038	0	1		+		30982	9545	15332	15393	35754	35754					-0.04653625861999444
SHAAGPHG	8	Unmodified	_SHAAGPHG_					0	0	0			REV__ENSG00000119574|ENST00000594051|ZBTB45	REV__ENSG00000119574|ENST00000594051|ZBTB45	MSMS	GG20161007_CRH_Patient100_W632_02	4	367.1710998415947	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.261	1	50.238	49.738	50.738	1.9772								0	0	0	1.0178	1	20215	20215		0.69038	0	1		+		30983	9545	15332	15393	35755	35755					-0.04653625861999444
SHAAGPHG	8	Unmodified	_SHAAGPHG_					0	0	0			REV__ENSG00000119574|ENST00000594051|ZBTB45	REV__ENSG00000119574|ENST00000594051|ZBTB45	MSMS	GG20161007_CRH_Patient100_W632_02	4	367.1718932986259	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.528	1	50.505	50.005	51.005	1.9772								0	0	0	1.0178	1	20327	20327		2.5775	0	1		+		30984	9545	15332	15393	35756	35756					-0.04653625861999444
SHALIKSLF	9	Unmodified	_SHALIKSLF_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000494129.1_1_2:192246088-192252282:+|nuORF	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2999145388603	2	508.300384	1014.58622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.635	1	39.455	38.955	39.955	1.8202								0	0	0	0.21022	1	15786	15786		25.399	14.575	1				30985	2378	15333	15394	35757	35757					0.07950637202566213
SHDCPSEH	8	Unmodified	_SHDCPSEH_					0	0	0		ENSG00000064989|ENST00000392370|CALCRL	ENSG00000064989|ENST00000392370|CALCRL	ENSG00000064989|ENST00000392370|CALCRL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	456.8425781130791	2	456.169241	910.32393	0.50171	0.00022886	-0.31156	-0.00014213	0.19014	8.6737E-05	456.16922059364344	11.038	0.64611	11.038	10.679	11.325	0					29	20	2	0	0	0	2.3239	1	4602	4602		5.7604	3.1829	1	912780			30986	778	15334	15395	35758	35758					-0.13481931875685405
SHDTMDMHG	9	Unmodified	_SHDTMDMHG_					0	0	0			REV__ENST00000593779.1_1_19:16698433-16698541:-|nuORF	REV__ENST00000593779.1_1_19:16698433-16698541:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.0341674685478	3	344.128748	1029.36441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.197	1	82.197	81.697	82.697	0								0	0	0	0.42693	1	34241	34241		0.26902	0	1		+		30987	14084	15335	15396	35759	35759					-0.14909333547575443
SHHTRHQRTH	10	Unmodified	_SHHTRHQRTH_					0	0	0		ZNF460|p.L239H|1|0.15|ENSG00000197714|chr19:57291257-57291257|T/A|missense_variant	ZNF460|p.L239H|1|0.15|ENSG00000197714|chr19:57291257-57291257|T/A|missense_variant	ZNF460|p.L239H|1|0.15|ENSG00000197714|chr19:57291257-57291257|T/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	432.8854858279228	3	432.885409	1295.6344	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4719	1	8.2026	7.7026	8.7026	0.73074								0	0	0	0.66264	1	3103	3103		0	0	1				30988	17364	15336	15397	35760	35760					-0.0015947610484090546
SHHWGYGK	8	Unmodified	_SHHWGYGK_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	324.4871398806572	3	324.487593	970.440949	-3.3718	-0.0010941	3.004	0.00097476	-0.36786	-0.00011936	324.4885181724537	11.678	1.2962	11.678	11.325	12.622	0					70	41	2	0	0	0	0.36182	1	4774	4774		62.573	46.726	1	1287600			30989	1455	15337	15398	35761	35761					-0.04545405873761865
SHHWGYGK	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHHWGYGK_					1	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.2334777712822	2	507.233033	1012.45151	0.75104	0.00038095	1.3212	0.00067013	2.0722	0.0010511	507.2334440887104	13.563	0.36945	13.563	13.424	13.794	0					22	11	3	0	0	0	0.066051	1	5612	5612		103.75	59.341	1	2768500			30990	1455	15337	15399	35762	35762					-0.054214232193317
SHHWGYGK	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHHWGYGK_					1	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.4912292361259	3	338.491114	1012.45151	-0.26951	-9.1228E-05	-0.10898	-3.6888E-05	-0.37849	-0.00012812	338.49114145585514	13.476	0.96509	13.575	13.406	14.371	0.09944					66	30	4	0	0	0	0.22215	3	5665	5575;5622;5665		78.728	62.579	1	3932800			30991	1455	15337	15399	35763;35764;35765	35765					-0.054214232193317
SHHWGYGK	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHHWGYGK_					1	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	338.4913207888603	3	338.491114	1012.45151	-1.3553	-0.00045877	0.98969	0.000335	-0.36565	-0.00012377	338.4914565829182	13.109	0.71667	13.835	13.663	14.38	0.72639					51	22	3	0	0	0	0.33037	2	5427	5427;5478		69.105	38.468	1	1950900			30992	1455	15337	15399	35766;35767	35766					-0.054214232193317
SHHWGYGK	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))SHHWGYGK_					1	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENST00000518231.1_1_8:86376310-86386082:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.4908325076103	3	338.491114	1012.45151	-0.38431	-0.00013008	-0.070193	-2.376E-05	-0.4545	-0.00015384	338.4911842183457	12.863	0.72898	13.651	13.52	14.249	0.78751					45	26	3	0	0	0	0.37214	1	5328	5328		60.074	48.579	1	1389000			30993	1455	15337	15399	35768	35768					-0.054214232193317
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.5391723513603	3	413.53857	1237.59388	-0.69543	-0.00028759	3.024	0.0012506	2.3286	0.00096296	413.53941360183325	11.741	0.98571	11.741	11.048	12.034	0					83	31	4	0	0	0	0.035767	4	4869	4768;4818;4869;4940		74.077	58.538	1	13392000		+	30994	341	15338	15400	35769;35770;35771;35772	35771					-0.015413000584885594
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.5394164919853	3	413.53857	1237.59388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.653	1	11.742	11.242	12.242	0.089381								0	0	0	0.25104	1	4835	4835		36.955	27.979	1			+	30995	341	15338	15400	35773	35773					-0.015413000584885594
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.5393554568291	3	413.53857	1237.59388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.783	1	11.872	11.372	12.372	0.089381								0	0	0	0.45189	1	4890	4890		33.632	24.656	1			+	30996	341	15338	15400	35774	35774					-0.015413000584885594
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.5398437380791	3	413.53857	1237.59388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.912	1	12.001	11.501	12.501	0.089381								0	0	0	0.63474	1	4944	4944		25.155	12.98	1			+	30997	341	15338	15400	35775	35775					-0.015413000584885594
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.5382873415947	3	413.53857	1237.59388	-0.57181	-0.00023647	0.91611	0.00037885	0.3443	0.00014238	413.53871851310237	11.163	0.88133	11.833	11.479	12.36	0.66934					55	27	3	0	0	0	0.085604	3	4637	4584;4637;4731		77.867	66.349	1	1740300		+	30998	341	15338	15400	35776;35777;35778	35777					-0.015413000584885594
SHKDDSPDLPK	11	Unmodified	_SHKDDSPDLPK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.5385925173759	3	413.53857	1237.59388	-0.010534	-4.3562E-06	0.73833	0.00030533	0.72779	0.00030097	413.53885597644563	10.954	0.70286	11.716	11.302	12.005	0.76165					44	26	2	0	0	0	0.307	2	4580	4532;4580		36.955	27.979	1	1316500		+	30999	341	15338	15400	35779;35780	35780					-0.015413000584885594
SHKEILQVI	9	Unmodified	_SHKEILQVI_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.8185302615166	2	533.816399	1065.61824	2.9851	0.0015935	3.8076	0.0020326	6.7927	0.0036261	533.8177828683471	65.361	0.30975	66.759	66.571	66.881	1.3989					19	9	3	0	0	0	0.045797	1	27398	27398		71.134	0	1	2359400			31000	3060	15339	15401	35781	35781					0.08806004885695984
SHKEILQVI	9	Unmodified	_SHKEILQVI_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	533.816399	1065.61824	2.0876	0.0011144	1.8511	0.00098816	3.9387	0.0021026	533.8170755697842	64.938	0.34251	66.846	66.658	67.001	1.9085	0.04338	-0.00075183	NaN	71.134	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1829600			31001	3060	15339	15401							0.08806004885695984
SHKRVAPKQL	10	Unmodified	_SHKRVAPKQL_					0	0	0			REV__ENST00000520776.5_1_17:45405719-45473360:+|nuORF	REV__ENST00000520776.5_1_17:45405719-45473360:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.5726501345634	3	388.571768	1162.69348	4.4123	0.0017145	-2.4733	-0.00096106	1.939	0.00075343	388.5708231264223	89.316	0.53014	90.721	90.456	90.986	1.4045					54	16	5	0	0	0	0.89803	1	37575	37575		0.62683	0	1	19796000	+		31002	11257	15340	15402	35782	35782					0.11863607136797327
SHLARHRRV	9	Unmodified	_SHLARHRRV_					0	0	0		ENSG00000197937|ENST00000334197|ZNF347;nc|ENSG00000197937|Q96SE7-2|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.3334838747978	2	566.333947	1130.65334	2.6467	0.0014989	-1.2409	-0.00070276	1.4058	0.00079617	566.3331532821211	107.53	0.097916	107.59	107.54	107.64	0.052444					10	4	3	0	0	0	0.85019	1	46041	46041		0.52476	0	1	37344000			31003	5031	15341	15403	35783	35783					0.09324105256860094
SHLARHRRV	9	Unmodified	_SHLARHRRV_					0	0	0		ENSG00000197937|ENST00000334197|ZNF347;nc|ENSG00000197937|Q96SE7-2|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	ENSG00000197937|ENST00000334197|ZNF347	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	566.333947	1130.65334	0.8875	0.00050262	-0.33186	-0.00018794	0.55564	0.00031468	566.3340603308034	107.57	0.075157	107.57	107.53	107.6	0	-0.0059709	0.00088679	NaN	0.52476	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5493700			31004	5031	15341	15403							0.09324105256860094
SHLLGGGG	8	Unmodified	_SHLLGGGG_					0	0	0		ENST00000568333.1_1_16:30567229-30569193:-|nuORF	ENST00000568333.1_1_16:30567229-30569193:-|nuORF	ENST00000568333.1_1_16:30567229-30569193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.1855041384697	2	349.18502	696.355488	1.8976	0.00066261	0.19897	6.9477E-05	2.0966	0.00073208	349.18527866622276	102.81	0.12849	102.97	102.91	103.03	0.16445					11	4	3	0	0	0	0.89198	1	43308	43308		0	0	1	8369400			31005	7372	15342	15404	35784	35784					-0.004835710594079501
SHLLGGGG	8	Unmodified	_SHLLGGGG_					0	0	0		ENST00000568333.1_1_16:30567229-30569193:-|nuORF	ENST00000568333.1_1_16:30567229-30569193:-|nuORF	ENST00000568333.1_1_16:30567229-30569193:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	349.18502	696.355488	2.8005	0.0009779	-1.1049	-0.0003858	1.6957	0.0005921	349.1850026498048	102.72	0.1292	102.9	102.83	102.96	0.18066	-0.033043	-0.00067667	NaN	0	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8661600			31006	7372	15342	15404							-0.004835710594079501
SHLLILDDS	9	Unmodified	_SHLLILDDS_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.1810180544853	3	338.181835	1011.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.316	1	94.316	93.816	94.816	0								0	0	0	0.42693	1	39414	39414		1.0715	0.61312	1				31007	3731	15343	15405	35785	35785					0.01837446343722604
SHPFLSLFL	9	Unmodified	_SHPFLSLFL_					0	0	0			REV__nc|ENSG00000130305|Q96P11-3|NSUN5	REV__nc|ENSG00000130305|Q96P11-3|NSUN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7938720583916	2	530.794935	1059.57532	1.9786	0.0010503	-3.7969	-0.0020154	-1.8183	-0.00096513	530.7920176472404	65.665	0.39428	67.574	67.312	67.706	1.9085					17	12	2	0	0	0	0.22519	1	27552	27552		30.225	0	1	1057000	+		31008	13283	15344	15406	35786	35786					0.047912348282807216
SHPPRYWPV	9	Unmodified	_SHPPRYWPV_					0	0	0		ENSG00000166428|ENST00000392593|PLD4	ENSG00000166428|ENST00000392593|PLD4	ENSG00000166428|ENST00000392593|PLD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.7958251833916	2	569.793258	1137.57196	1.8372	0.0010468	-0.25433	-0.00014491	1.5829	0.00090192	569.7930547218796	72.485	0.40654	72.81	72.547	72.954	0.32494					36	12	4	0	0	0	0.75267	1	30247	30247		5.2307	0	1	7861900			31009	3901	15345	15407	35787	35787					0.008679847742541824
SHQLATYLVQM	11	Unmodified	_SHQLATYLVQM_					0	0	0			REV__ENSG00000164880|ENST00000404767|INTS1	REV__ENSG00000164880|ENST00000404767|INTS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884155154228	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.293	1	7.9201	7.4201	8.4201	0.62713								0	0	0	0.63775	1	3017	3017		0.094841	0	1		+		31010	10752	15346	15408	35788	35788					0.010571113457899628
SHRAKLYRYDK	11	Unmodified	_SHRAKLYRYDK_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	718.8928100466728	2	718.891492	1435.76843	1.0505	0.00075522	0.9417	0.00067698	1.9922	0.0014322	718.8913339906941	45.215	0.31124	47.175	47.021	47.332	1.9596					16	9	2	0	0	0	0.87205	1	18938	18938		11.495	6.1978	1	471790			31011	3349	15347	15409	35789	35789					0.0679774487737177
SHRAKLYRYDK	11	Unmodified	_SHRAKLYRYDK_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	718.891492	1435.76843	1.7073	0.0012273	1.8928	0.0013607	3.6001	0.0025881	719.3959426734701	46.842	0.27379	47.172	47.023	47.297	0.33034	0.053749	0.0029605	NaN	11.495	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520690			31012	3349	15347	15409							0.0679774487737177
SHRAKLYRYDK	11	Unmodified	_SHRAKLYRYDK_					0	0	0		ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	ENSG00000153201|ENST00000283195|RANBP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	718.891492	1435.76843	1.4554	0.0010463	-0.75901	-0.00054565	0.69641	0.00050064	718.8906190060789	45.632	0.28051	47.007	46.897	47.177	1.3751	-0.11066	-0.00085228	NaN	11.495	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	739230			31013	3349	15347	15409							0.0679774487737177
SHRAVVHFV	9	Unmodified	_SHRAVVHFV_					0	0	0		ENST00000535402.1_1_12:662343-670614:+|nuORF;ENSG00000139044|ENST00000266383|B4GALNT3	ENST00000535402.1_1_12:662343-670614:+|nuORF	ENST00000535402.1_1_12:662343-670614:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	351.1969177126884	3	351.198042	1050.5723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.488	1	19.488	18.988	19.988	0								0	0	0	0.42693	1	8100	8100		1.1933	0	1				31014	2861	15348	15410	35790	35790					0.049034044941208776
SHRYIEHYTLQ	11	Unmodified	_SHRYIEHYTLQ_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L;SAMD9L|p.V553Gfs*10|1|0.41|ENSG00000177409|chr7:93134314-93134315|-/C|frameshift_variant	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	724.3619872927666	2	723.859857	1445.70516	1.7842	0.0012915	-1.362	-0.00098589	0.42217	0.00030559	723.8585991222667	70.858	0.40996	70.858	70.657	71.067	0					35	12	4	0	0	0	0.85967	2	29486	29486;29535		12.241	6.0349	1	2076800			31015	4444	15349	15411	35791;35792	35791					0.00013759369448962389
SHSIPEMEK	9	Oxidation (M)	_SHSIPEM(Oxidation (M))EK_		SHSIPEM(1)EK		SHSIPEM(48)EK	0	0	1			REV__nc|ENSG00000101842|Q86XK7-2|VSIG1	REV__nc|ENSG00000101842|Q86XK7-2|VSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.2510864138603	2	537.250231	1072.48591	0.44226	0.00023761	1.136	0.00061031	1.5783	0.00084792	537.251338710783	13.595	0.46441	13.595	13.361	13.825	0					37	14	3	0	0	0	0.10473	1	5649	5649		47.749	9.5731	1	6521600	+		31016	14404	15350	15412	35793	35793		122			-0.04743387913413244
SHSIPEMEK	9	Oxidation (M)	_SHSIPEM(Oxidation (M))EK_		SHSIPEM(1)EK		SHSIPEM(48)EK	0	0	1			REV__nc|ENSG00000101842|Q86XK7-2|VSIG1	REV__nc|ENSG00000101842|Q86XK7-2|VSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.2521240115166	2	537.250231	1072.48591	0.28915	0.00015534	2.0635	0.0011086	2.3527	0.001264	537.2519050698132	13.496	0.31465	13.596	13.465	13.78	0.099441					19	9	3	0	0	0	0.10473	1	5599	5599		47.749	17.112	1	1081300	+		31017	14404	15350	15412	35794	35794		122			-0.04743387913413244
SHVLLSGPDPL	11	Unmodified	_SHVLLSGPDPL_					0	0	0			REV__ENSG00000172889|ENST00000308874|EGFL7	REV__ENSG00000172889|ENST00000308874|EGFL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8141357302666	2	567.811313	1133.60807	1.6726	0.0009497	-0.28261	-0.00016047	1.3899	0.00078923	567.8111409448876	54.761	0.9209	56.166	55.867	56.788	1.4048					83	30	5	0	0	0	0.58697	1	22835	22835		21.537	1.911	1	129200000	+		31018	11076	15351	15413	35795	35795					0.04661397160475644
SHVPALAP	8	Unmodified	_SHVPALAP_					0	0	0			REV__ENST00000582176.1_1_3:127800095-127800410:-|nuORF	REV__ENST00000582176.1_1_3:127800095-127800410:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2242004275322	2	396.224146	790.433738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.762	1	85.023	84.523	85.523	0.26083								0	0	0	1.0178	1	35445	35445		0.79363	0	1		+		31019	14003	15352	15414	35796	35796					0.030138615257897072
SIADLVVAV	9	Unmodified	_SIADLVVAV_					0	0	0		ENSG00000180914|ENST00000316793|OXTR	ENSG00000180914|ENST00000316793|OXTR	ENSG00000180914|ENST00000316793|OXTR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	886.5251953005791	1	886.52441	885.517133	2.4343	0.0021581	-3.0049	-0.0026639	-0.57058	-0.00050583	886.5205682263883	73.773	0.28793	74.098	73.945	74.233	0.32494					13	8	2	0	0	0	0.19075	1	30845	30845		34.102	5.6156	1	482680			31020	4561	15353	15415	35797	35797					0.06979553183009557
SIAEVVHQL	9	Unmodified	_SIAEVVHQL_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.2795593142509	2	498.279649	994.544745	1.6579	0.00082612	0.71674	0.00035713	2.3747	0.0011832	498.2798042423731	44.732	0.2466	44.732	44.594	44.841	0					12	7	2	0	0	0	0.37774	1	18727	18727		21.537	6.6987	1	465810			31021	4496	15354	15416	35798	35798					0.04725456443236453
SIAEVVHQL	9	Unmodified	_SIAEVVHQL_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2797729372978	2	498.279649	994.544745	1.5437	0.00076917	-0.23329	-0.00011624	1.3104	0.00065293	498.27891600270306	42.148	0.24707	44.069	43.949	44.196	1.9211					13	7	2	0	0	0	0.086433	1	17668	17668		53.833	26.204	1	990730			31022	4496	15354	15416	35799	35799					0.04725456443236453
SIAEVVHQL	9	Unmodified	_SIAEVVHQL_					0	0	0		nc|ENSG00000178950|O14976-2|GAK;ENSG00000178950|ENST00000314167|GAK;ENST00000504435.1_1_4:882633-887812:-|nuORF	nc|ENSG00000178950|O14976-2|GAK	nc|ENSG00000178950|O14976-2|GAK	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	498.279649	994.544745	1.6538	0.00082406	-0.02585	-1.2881E-05	1.628	0.00081118	498.2793107403066	42.792	0.34236	44.132	43.891	44.233	1.3399	0.031642	5.8915E-05	NaN	53.833	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	918050			31023	4496	15354	15416							0.04725456443236453
SIAGHWRYLCL	11	Unmodified	_SIAGHWRYLCL_					0	0	0			REV__ENST00000581223.2_17:21911572-21911938:+|nuORF	REV__ENST00000581223.2_17:21911572-21911938:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	659.8423339724541	2	659.839882	1317.66521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.791	1	98.047	97.547	98.547	0.25636								0	0	0	0.63773	1	41143	41143		8.7454	0.58988	1		+		31024	14000	15355	15417	35800	35800					0.01908541165198585
SIAHEHMSI	9	Unmodified	_SIAHEHMSI_					0	0	0		ENST00000001008.5_1_12:2912594-2912684:+|nuORF	ENST00000001008.5_1_12:2912594-2912684:+|nuORF	ENST00000001008.5_1_12:2912594-2912684:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7473632693291	2	512.747659	1023.48076	1.8389	0.0009429	0.032057	1.6437E-05	1.871	0.00095934	512.7475562022646	70.646	0.45782	70.646	70.449	70.907	0					61	14	7	0	0	0	0.59203	1	29393	29393		11.64	0	1	10229000			31025	5491	15356	15418	35801	35801					-0.03003646985348496
SIAKTKTKG	9	Unmodified	_SIAKTKTKG_					0	0	0			REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5759765505791	1	933.572757	932.565481	3.4311	0.0032032	0.59358	0.00055415	4.0247	0.0037573	933.5728188376239	106.13	0.14046	106.29	106.21	106.35	0.15781					20	7	4	0	0	0	0.85403	1	45375	45375		0	0	1	121910000	+		31026	15303	15357	15419	35802	35802					0.09650046822923741
SIAKTKTKG	9	Unmodified	_SIAKTKTKG_					0	0	0			REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	933.572757	932.565481	3.4311	0.0032032	0.59358	0.00055415	4.0247	0.0037573	933.5728188376239	106.13	0.14046	106.29	106.21	106.35	0.15781	0.013124	0.00037103	NaN	0	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	121910000	+		31027	15303	15357	15419							0.09650046822923741
SIAKTKTKG	9	Unmodified	_SIAKTKTKG_					0	0	0			REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	REV__tr|A0A553SUQ5|A0A553SUQ5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04765PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	933.572757	932.565481	3.4437	0.003215	-0.20772	-0.00019392	3.236	0.003021	933.5722391599319	106.1	0.14078	106.26	106.19	106.33	0.16174	-0.013124	-0.00037704	NaN	0	23	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	127840000	+		31028	15303	15357	15419							0.09650046822923741
SIALIIVLI	9	Unmodified	_SIALIIVLI_					0	0	0			REV__ENSG00000117525|ENST00000334047|F3	REV__ENSG00000117525|ENST00000334047|F3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	954.6599609255791	1	954.659781	953.652505	1.2799	0.0012219	-1.2721	-0.0012144	0.0078017	7.448E-06	954.657980464407	98.404	0.28416	98.404	98.353	98.638	0					25	10	4	0	0	0	0.031324	1	41140	41140		85.357	0	1	384530000	+		31029	9504	15358	15420	35803	35803					0.17382453044604063
SIALNLNYL	9	Unmodified	_SIALNLNYL_					0	0	0		ENST00000374994.8_2_9:101915404-101915491:+|nuORF	ENST00000374994.8_2_9:101915404-101915491:+|nuORF	ENST00000374994.8_2_9:101915404-101915491:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2886535525322	2	510.78985	1019.56515	2.5847	0.0013202	-3.6769	-0.0018781	-1.0922	-0.00055789	511.28861185882687	49.744	0.71519	51.135	50.704	51.419	1.3911					52	22	3	0	0	0	0.59203	1	20736	20736		11.64	0	1	4880800			31030	6179	15359	15421	35804	35804					0.056146271030456774
SIAQEAKYI	9	Unmodified	_SIAQEAKYI_					0	0	0		tr|A0A7D6ZWV2|A0A7D6ZWV2_9CLOTSporulationtranscriptionalregulatorSpoIIIDOS=ClostridiumintestinaleOX=36845GN=spoIIIDPE=4SV=1	tr|A0A7D6ZWV2|A0A7D6ZWV2_9CLOTSporulationtranscriptionalregulatorSpoIIIDOS=ClostridiumintestinaleOX=36845GN=spoIIIDPE=4SV=1	tr|A0A7D6ZWV2|A0A7D6ZWV2_9CLOTSporulationtranscriptionalregulatorSpoIIIDOS=ClostridiumintestinaleOX=36845GN=spoIIIDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.7776367068291	2	511.779482	1021.54441	1.9545	0.0010003	-2.6278	-0.0013449	-0.67334	-0.0003446	511.7782390113649	78.238	0.31855	78.547	78.355	78.674	0.30933					14	9	2	0	0	0	0.28372	1	32703	32703		26.268	0.86883	1	678020			31031	17179	15360	15422	35805	35805					0.034500367233818
SIASLVKFY	9	Unmodified	_SIASLVKFY_					0	0	0		ENSG00000089902|ENST00000262241|RCOR1;RCOR1-TECPR2|1|fusion	ENSG00000089902|ENST00000262241|RCOR1	ENSG00000089902|ENST00000262241|RCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2965576052666	2	514.294768	1026.57498	2.9818	0.0015335	0.68012	0.00034978	3.6619	0.0018833	514.2954882289184	60.226	0.36266	61.646	61.449	61.812	1.4196					24	11	3	0	0	0	0.098163	1	25269	25269		49.933	15.831	1	1701000			31032	1132	15361	15423	35806	35806					0.0627581510843811
SIASLVKFY	9	Unmodified	_SIASLVKFY_					0	0	0		ENSG00000089902|ENST00000262241|RCOR1;RCOR1-TECPR2|1|fusion	ENSG00000089902|ENST00000262241|RCOR1	ENSG00000089902|ENST00000262241|RCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2969238162041	2	514.294768	1026.57498	3.1953	0.0016433	0.47966	0.00024669	3.6749	0.00189	514.2952426804972	59.657	0.33076	61.626	61.495	61.826	1.969					19	10	3	0	0	0	0.033504	1	25047	25047		81.89	43.275	1	1642400			31033	1132	15361	15423	35807	35807					0.0627581510843811
SIAVKPKWRRF	11	Unmodified	_SIAVKPKWRRF_					0	0	0			REV__VPS13D|p.G1592Yfs*19|1|0.06|ENSG00000048707|chr1:12282875-12282876|-/TACAAGTGTGACCAGCCGCGCCCAGGCA|frameshift_variant	REV__VPS13D|p.G1592Yfs*19|1|0.06|ENSG00000048707|chr1:12282875-12282876|-/TACAAGTGTGACCAGCCGCGCCCAGGCA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	463.2855407595634	3	463.282218	1386.82482	3.3885	0.0015698	3.7455	0.0017352	7.1339	0.003305	463.28453355793204	97.145	0.18635	97.235	97.149	97.335	0.090881					10	5	3	0	0	0	1.0362	1	40653	40653		0.45452	0.046251	1	3247100	+		31034	8613	15362	15424	35808	35808					0.14688417504680729
SIAVKQAG	8	Unmodified	_SIAVKQAG_					0	0	0			REV__ENST00000481254.1_1_9:35075210-35075499:-|nuORF	REV__ENST00000481254.1_1_9:35075210-35075499:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	387.2842285037041	2	387.229428	772.444303	3.0206	0.0011697	0.58079	0.0002249	3.6014	0.0013946	387.22984867837124	107.72	0.13023	107.88	107.81	107.94	0.15795					11	6	2	0	0	0	2.3239	1	46371	46371		0.69038	0	1	38811000	+		31035	11876	15363	15425	35809	35809					0.048978441802432826
SIAVPKEFVV	10	Unmodified	_SIAVPKEFVV_					0	0	0		nc|ENSG00000164796|Q7Z407-3|CSMD3;nc|ENSG00000164796|Q7Z407-2|CSMD3;ENSG00000164796|ENST00000297405|CSMD3;CSMD3|p.F1801C|1|0.03|ENSG00000164796|chr8:112409026-112409026|A/C|missense_variant;nc|ENSG00000164796|Q7Z407-5|CSMD3	nc|ENSG00000164796|Q7Z407-3|CSMD3	nc|ENSG00000164796|Q7Z407-3|CSMD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8198730349541	2	544.82115	1087.62775	2.1044	0.0011465	1.2655	0.00068948	3.3699	0.001836	544.8214998151788	61.137	0.2809	61.467	61.235	61.516	0.32974					14	8	2	0	0	0	0.85124	1	25599	25599		6.7232	0	1	495700			31036	3797	15364	15426	35810	35810					0.08743773171249813
SICMLKTLV	9	Unmodified	_SICMLKTLV_					0	0	0		UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2866393923759	2	504.285031	1006.55551	2.0082	0.0010127	2.236	0.0011276	4.2441	0.0021403	504.28562504382774	64.271	0.28779	64.271	64.111	64.398	0					13	8	2	0	0	0	0.53525	1	26806	26806		13.906	3.8321	1	994920			31037	17350	15365	15427	35811	35811					0.0524939950166754
SICMLKTLV	9	Unmodified	_SICMLKTLV_					0	0	0		UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2852355837822	2	504.285031	1006.55551	1.958	0.00098737	-1.0747	-0.00054198	0.88322	0.00044539	504.2850509676947	64.82	0.48085	64.82	64.527	65.008	0					36	14	3	0	0	0	0.42305	1	27017	27017		19.257	5.3509	1	930970			31038	17350	15365	15427	35812	35812					0.0524939950166754
SICTIGLMV	9	Unmodified	_SICTIGLMV_					0	0	0			REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.4917480349541	1	936.489287	935.48201	2.3049	0.0021585	0.71403	0.00066868	3.0189	0.0028272	936.4897667129806	50.515	0.24614	51.909	51.77	52.016	1.3938					13	7	2	0	0	0	0.24063	1	21154	21154		28.487	1.6032	1	963210	+		31039	15125	15366	15428	35813	35813					0.011688510591852719
SICTIGLMV	9	Unmodified	_SICTIGLMV_					0	0	0			REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	936.4935180544853	1	936.489287	935.48201	1.8526	0.0017349	1.3343	0.0012495	3.1868	0.0029844	936.4904536464306	49.953	0.31079	51.93	51.788	52.099	1.9772					14	9	2	0	0	0	0.24063	1	20918	20918		28.487	5.3384	1	858790	+		31040	15125	15366	15428	35814	35814					0.011688510591852719
SICTIGLMV	9	Unmodified	_SICTIGLMV_					0	0	0			REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	936.489287	935.48201	2.3049	0.0021585	0.71403	0.00066868	3.0189	0.0028272	936.4897667129806	50.515	0.24614	51.909	51.77	52.016	1.3938	-0.010632	-0.00034996	NaN	28.487	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	963210	+		31041	15125	15366	15428							0.011688510591852719
SICTIGLMV	9	Unmodified	_SICTIGLMV_					0	0	0			REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	REV__tr|A0A553SQ92|A0A553SQ92_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_22310PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	936.489287	935.48201	1.8526	0.0017349	1.3343	0.0012495	3.1868	0.0029844	936.4904536464306	49.953	0.31079	51.93	51.788	52.099	1.9772	0.010632	0.00023089	NaN	28.487	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	858790	+		31042	15125	15366	15428							0.011688510591852719
SIDIENIML	9	Unmodified	_SIDIENIML_					0	0	0			REV__tr|A0A553SPE2|A0A553SPE2_NIACISecretedproteinOS=NialliacirculansOX=1397GN=CEQ21_26150PE=4SV=1	REV__tr|A0A553SPE2|A0A553SPE2_NIACISecretedproteinOS=NialliacirculansOX=1397GN=CEQ21_26150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.2735473513603	2	524.273175	1046.5318	2.633	0.0013804	-2.7984	-0.0014671	-0.16544	-8.6736E-05	524.2717757998804	76.545	0.37553	77.838	77.607	77.983	1.2938					23	11	3	0	0	0	0.19075	1	32128	32128		34.102	5.6156	1	2532000	+		31043	15085	15367	15429	35815	35815					0.01039257268826077
SIDIENIML	9	Unmodified	_SIDIENIML_					0	0	0			REV__tr|A0A553SPE2|A0A553SPE2_NIACISecretedproteinOS=NialliacirculansOX=1397GN=CEQ21_26150PE=4SV=1	REV__tr|A0A553SPE2|A0A553SPE2_NIACISecretedproteinOS=NialliacirculansOX=1397GN=CEQ21_26150PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	524.273175	1046.5318	2.633	0.0013804	-2.7984	-0.0014671	-0.16544	-8.6736E-05	524.2717757998804	76.545	0.37553	77.838	77.607	77.983	1.2938	0.020358	-0.00022238	NaN	34.102	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2532000	+		31044	15085	15367	15429							0.01039257268826077
SIDKFITNV	9	Unmodified	_SIDKFITNV_					0	0	0			REV__tr|A0A7D7A5P7|A0A7D7A5P7_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06990PE=3SV=1	REV__tr|A0A7D7A5P7|A0A7D7A5P7_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06990PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1390258669853	2	518.787307	1035.56006	1.8402	0.0009547	-0.99041	-0.00051381	0.84984	0.00044088	518.7868561986347	70.702	0.21268	70.702	70.567	70.78	0					9	6	2	0	0	0	0.11463	1	29428	29428		12.532	6.7711	1	363900	+		31045	15885	15368	15430	35816	35816					0.04370323240414109
SIDKFITNV	9	Unmodified	_SIDKFITNV_					0	0	0			REV__tr|A0A7D7A5P7|A0A7D7A5P7_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06990PE=3SV=1	REV__tr|A0A7D7A5P7|A0A7D7A5P7_9CLOTATP-bindingcassettedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06990PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	518.787307	1035.56006	2.1336	0.0011069	-0.78595	-0.00040774	1.3477	0.00069915	518.7870670215771	69.109	0.18016	70.475	70.35	70.53	1.3657	-0.11387	8.3137E-05	NaN	12.532	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	662710	+		31046	15885	15368	15430							0.04370323240414109
SIEEHHFYF	9	Unmodified	_SIEEHHFYF_					0	0	0		CDH19|p.N508I|1|0.64|ENSG00000071991|chr18:66511621-66511621|T/A|missense_variant;ENSG00000071991|ENST00000262150|CDH19	CDH19|p.N508I|1|0.64|ENSG00000071991|chr18:66511621-66511621|T/A|missense_variant	CDH19|p.N508I|1|0.64|ENSG00000071991|chr18:66511621-66511621|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.7726318240166	2	604.772188	1207.52982	1.7315	0.0010472	0.023519	1.4224E-05	1.755	0.0010614	604.7723720165205	48.905	2.3989	50.293	49.458	51.857	1.388					165	76	3	0	0	0	0.34572	2	20775	20413;20775		23.148	2.6948	1	3832500			31047	137	15369	15431	35817;35818	35818					-0.06564035424776193
SIEGCTSV	8	Unmodified	_SIEGCTSV_					0	0	0			REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	795.3602172732353	1	795.355296	794.348019	2.8783	0.0022892	3.134	0.0024927	6.0123	0.0047819	795.3575506182339	104.55	0.098694	104.73	104.67	104.77	0.1731					14	4	4	0	0	0	0.88663	1	44259	44259		4.756	0	1	97668000	+		31048	15024	15370	15432	35819	35819					-0.057380914420150475
SIEGCTSV	8	Unmodified	_SIEGCTSV_					0	0	0			REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	795.355296	794.348019	2.752	0.0021888	4.4738	0.0035583	7.2258	0.0057471	795.3584793382997	104.64	0.077744	104.7	104.65	104.72	0.056801	-0.017503	0.00023656	NaN	4.756	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	56161000	+		31049	15024	15370	15432							-0.057380914420150475
SIEGCTSV	8	Unmodified	_SIEGCTSV_					0	0	0			REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	795.355296	794.348019	2.709	0.0021546	3.2999	0.0026246	6.0089	0.0047792	795.3577918143556	104.6	0.11005	104.76	104.7	104.81	0.16055	0.045194	-0.00069715	NaN	4.756	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	132330000	+		31050	15024	15370	15432							-0.057380914420150475
SIEGCTSV	8	Unmodified	_SIEGCTSV_					0	0	0			REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	REV__tr|A0A553SMK3|A0A553SMK3_NIACIS-adenosylmethioninedecarboxylaseproenzymeOS=NialliacirculansOX=1397GN=speDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	795.355296	794.348019	2.8783	0.0022892	3.134	0.0024927	6.0123	0.0047819	795.3575506182339	104.55	0.098694	104.73	104.67	104.77	0.1731	0.014179	-0.00082905	NaN	4.756	14	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97668000	+		31051	15024	15370	15432							-0.057380914420150475
SIELKQTV	8	Unmodified	_SIELKQTV_					0	0	0			REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1736633181572	2	459.26875	916.522947	2.8237	0.0012968	0.0063077	2.8969E-06	2.83	0.0012997	459.26876959797426	56.387	0.2264	56.708	56.589	56.816	0.32103					10	7	2	0	0	0	2.3239	1	23666	23666		2.3027	0	1	886820	+		31052	8451	15371	15433	35820	35820					0.06134651694662807
SIELKQTV	8	Unmodified	_SIELKQTV_					0	0	0			REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1735107302666	2	459.26875	916.522947	3.1232	0.0014344	-0.5803	-0.00026651	2.5429	0.0011679	459.2684500019424	59.669	0.51134	61.638	61.376	61.887	1.969					48	16	4	0	0	0	2.3239	1	25142	25142		0.6015	0	1	40326000	+		31053	8451	15371	15433	35821	35821					0.06134651694662807
SIELLSYPN	9	Unmodified	_SIELLSYPN_					0	0	0			REV__ENSG00000111241|ENST00000228837|FGF6	REV__ENSG00000111241|ENST00000228837|FGF6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.8251220583916	2	518.27149	1034.52843	2.7808	0.0014412	1.5936	0.00082591	4.3744	0.0022671	518.2717001100106	81.002	0.21907	82.698	82.547	82.766	1.6959					10	6	2	0	0	0	0.08828	1	33968	33968		21.747	0	1	1053700	+		31054	9321	15372	15434	35822	35822					0.012543304864720994
SIFGKDFLL	9	Unmodified	_SIFGKDFLL_					0	0	0		nc|ENSG00000150687|O95084-2|PRSS23;ENSG00000150687|ENST00000280258|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2964965701103	2	520.294768	1038.57498	2.7463	0.0014289	0.91355	0.00047531	3.6599	0.0019042	520.2952038568525	72.138	0.3954	73.949	73.772	74.167	1.8101					23	12	2	0	0	0	0.15456	1	30306	30306		38.176	3.7738	1	6040200			31055	3270	15373	15435	35823	35823					0.05723815108422059
SIFQSFSKV	9	Unmodified	_SIFQSFSKV_					0	0	0			REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	521.7813598513603	2	521.782025	1041.5495	2.5882	0.0013505	-3.0876	-0.001611	-0.49935	-0.00026055	521.7803048621669	75.617	0.43379	75.939	75.71	76.144	0.32163					38	13	4	0	0	0	0.15456	2	31615	31615;31660		38.176	0.74515	1	6739000	+		31056	12339	15374	15436	35824;35825	35824					0.030383405859993218
SIFQSFSKV	9	Unmodified	_SIFQSFSKV_					0	0	0			REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	521.782025	1041.5495	2.5882	0.0013505	-3.0876	-0.001611	-0.49935	-0.00026055	521.7803048621669	75.617	0.43379	75.939	75.71	76.144	0.32163	0.0040653	-0.00028758	NaN	38.176	38	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6739000	+		31057	12339	15374	15436							0.030383405859993218
SIFQSFSKV	9	Unmodified	_SIFQSFSKV_					0	0	0			REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	REV__ENST00000306399.3_1_3:185686359-185697623:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	521.782025	1041.5495	2.9555	0.0015421	-2.2167	-0.0011566	0.73882	0.0003855	521.7808087779347	74.089	0.54574	75.885	75.536	76.082	1.7962	-0.050015	0.00062121	NaN	38.176	43	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12157000	+		31058	12339	15374	15436							0.030383405859993218
SIFSFRSATI	10	Unmodified	_SIFSFRSATI_					0	0	0			REV__ENST00000304056.8_1_7:32919280-32919331:-|nuORF	REV__ENST00000304056.8_1_7:32919280-32919331:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8071166872978	2	564.806031	1127.59751	1.5713	0.00088748	1.1181	0.00063153	2.6894	0.001519	564.8072315064577	66.538	0.34135	68.427	68.245	68.587	1.8889					22	10	3	0	0	0	0.79268	1	27905	27905		13.042	2.2185	1	2005600	+		31059	12327	15375	15437	35826	35826					0.038814145060541705
SIFSNIALGF	10	Unmodified	_SIFSNIALGF_					0	0	0		tr|A0A553SQM7|A0A553SQM7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07945PE=4SV=1	tr|A0A553SQM7|A0A553SQM7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07945PE=4SV=1	tr|A0A553SQM7|A0A553SQM7_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07945PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7953979372978	2	534.78985	1067.56515	1.728	0.00092412	3.4247	0.0018315	5.1527	0.0027556	534.7915540417514	46.304	0.62039	48.274	47.852	48.472	1.9703					51	19	4	0	0	0	0.63205	1	19439	19439		21.537	1.0834	1	5149800			31060	16521	15376	15438	35827	35827					0.034066271030496864
SIFYYCLLL	9	Unmodified	_SIFYYCLLL_					0	0	0		LUM|p.L301Rfs*66|1|0.04|ENSG00000139329|chr12:91104269-91104281|TGGAGTAGGATAA/-|frameshift_variant	LUM|p.L301Rfs*66|1|0.04|ENSG00000139329|chr12:91104269-91104281|TGGAGTAGGATAA/-|frameshift_variant	LUM|p.L301Rfs*66|1|0.04|ENSG00000139329|chr12:91104269-91104281|TGGAGTAGGATAA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7972900271416	2	567.798829	1133.5831	2.6119	0.001483	-1.8196	-0.0010332	0.79222	0.00044982	567.7967097708281	77.049	0.22457	78.33	78.249	78.474	1.2809					10	6	2	0	0	0	0.34572	1	32338	32338		23.148	1.4018	1	1110700			31061	7788	15377	15439	35828	35828					0.021656260335475963
SIGFMFIGV	9	Unmodified	_SIGFMFIGV_					0	0	0			REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	485.7260619997978	2	485.756964	969.499375	2.7464	0.0013341	3.6906	0.0017928	6.437	0.0031268	485.75869232414084	60.229	0.42192	61.649	61.39	61.812	1.4196					17	13	2	0	0	0	0.10306	1	25260	25260		13.508	3.3245	1	393570	+		31062	11473	15378	15440	35829	35829					0.013405146565105497
SIGFMFIGV	9	Unmodified	_SIGFMFIGV_					0	0	0			REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	REV__nc|ENSG00000185792|Q7RTR0-2|NLRP9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	485.7268554568291	2	485.756964	969.499375	2.877	0.0013975	3.5298	0.0017146	6.4068	0.0031121	485.7586865363123	59.81	0.36521	61.779	61.522	61.887	1.969					15	11	2	0	0	0	0.10306	1	25097	25097		13.508	3.3245	1	438900	+		31063	11473	15378	15440	35830	35830					0.013405146565105497
SIGINTIVAI	10	Unmodified	_SIGINTIVAI_					0	0	0			REV__tr|A0A7D6ZY13|A0A7D6ZY13_9CLOTUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=ClostridiumintestinaleOX=36845GN=murFPE=3SV=1	REV__tr|A0A7D6ZY13|A0A7D6ZY13_9CLOTUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanineligaseOS=ClostridiumintestinaleOX=36845GN=murFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8065673708916	2	500.8055	999.596446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.32	1	45.263	44.763	45.763	1.9438								0	0	0	0.046949	1	18162	18162		45.7	0	1		+		31064	15774	15379	15441	35831	35831					0.09663200137140393
SIGIPKSVGV	10	Unmodified	_SIGIPKSVGV_					0	0	0			REV__ENSG00000196700|ENST00000369888|ZNF512B	REV__ENSG00000196700|ENST00000369888|ZNF512B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.2970764040947	2	478.792392	955.570232	2.5289	0.0012108	-0.13847	-6.6298E-05	2.3904	0.0011445	478.7923515961977	50.045	0.75087	50.375	50.169	50.92	0.33019					53	23	4	0	0	0	0.65574	1	20952	20952		20.454	0	1	25816000	+		31065	11646	15380	15442	35832	35832					0.09066930965661868
SIGIRGYMIVI	11	Unmodified	_SIGIRGYMIVI_					0	0	0			REV__ENST00000506359.1_1_4:73012322-73013526:+|nuORF	REV__ENST00000506359.1_1_4:73012322-73013526:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.8558227419853	2	611.354834	1220.69511	2.1106	0.0012903	1.1735	0.00071741	3.2841	0.0020077	611.3552112816064	78.111	0.78645	78.111	77.749	78.535	0					45	24	2	0	0	0	0.95983	1	32385	32385		6.2058	0	1	1005400	+		31066	8638	15381	15443	35833	35833					0.09359480110538243
SIGISLIVG	9	Unmodified	_SIGISLIVG_					0	0	0		tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	tr|A0A553SRK6|A0A553SRK6_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_01255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.5312377810478	1	858.529495	857.522219	3.6686	0.0031496	-0.1802	-0.00015471	3.4884	0.0029949	858.5290110255519	82.309	0.28618	83.522	83.38	83.666	1.2125					12	8	2	0	0	0	0.051699	1	34537	34537		67.344	0	1	1310400			31067	16564	15382	15444	35834	35834					0.0877585704562307
SIGLAVQQIHR	11	Unmodified	_SIGLAVQQIHR_					0	0	0			REV__nc|ENSG00000164627|Q6ZMV9-4|KIF6	REV__nc|ENSG00000164627|Q6ZMV9-4|KIF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3577758669853	2	611.356754	1220.69895	2.8376	0.0017348	-1.4773	-0.00090316	1.3603	0.00083165	611.3553945976769	74.989	0.89393	76.295	75.936	76.83	1.3063					45	28	2	0	0	0	1.0366	1	31484	31484		1.1933	0	1	1015700	+		31068	10742	15383	15445	35835	35835					0.09743285928584555
SIGLVSTK	8	Unmodified	_SIGLVSTK_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	804.4912597537041	1	804.482545	803.475269	2.9164	0.0023462	3.8411	0.0030901	6.7575	0.0054363	804.4862755277861	101.06	0.3781	101.27	101.07	101.45	0.20527					15	12	2	0	0	0	0.87276	1	42512	42512		13.508	0	1	10209000	+		31069	8789	15384	15446	35836	35836					0.0656699749447398
SIGLVSTK	8	Unmodified	_SIGLVSTK_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	804.482545	803.475269	1.2761	0.0010266	6.1343	0.004935	7.4104	0.0059616	804.4878598339403	101.27	0.43926	101.27	101.09	101.53	0	-0.0067165	0.001028	NaN	13.508	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9880500	+		31070	8789	15384	15446							0.0656699749447398
SIGLVSTK	8	Unmodified	_SIGLVSTK_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	804.482545	803.475269	2.7576	0.0022184	4.5941	0.0036959	7.3517	0.0059143	804.4868455651794	101.21	0.45348	101.28	101.12	101.58	0.067009	0.0021867	-0.00021111	NaN	13.508	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9168400	+		31071	8789	15384	15446							0.0656699749447398
SIGLVSTK	8	Unmodified	_SIGLVSTK_					0	0	0			REV__ENSG00000078295|ENST00000338316|ADCY2	REV__ENSG00000078295|ENST00000338316|ADCY2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	804.482545	803.475269	2.9164	0.0023462	3.8411	0.0030901	6.7575	0.0054363	804.4862755277861	101.06	0.3781	101.27	101.07	101.45	0.20527	-0.0089066	-0.0008169	NaN	13.508	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10209000	+		31072	8789	15384	15446							0.0656699749447398
SIHDVTFQV	9	Unmodified	_SIHDVTFQV_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.2687255740166	2	523.269281	1044.52401	2.4168	0.0012647	-0.48169	-0.00025205	1.9351	0.0010126	523.7709613111141	39.808	0.26903	41.118	40.938	41.207	1.3102					12	8	2	0	0	0	0.19075	1	16701	16701		34.102	15.967	1	1190000			31073	491	15385	15447	35837	35837					0.0035286606357658457
SIHDVTFQV	9	Unmodified	_SIHDVTFQV_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2703735232353	2	523.269281	1044.52401	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.304	1	41.141	40.641	41.641	1.8366								0	0	0	0.16797	1	16477	16477		28.487	6.7402	1				31074	491	15385	15447	35838	35838					0.0035286606357658457
SIHHYGRI	8	Unmodified	_SIHHYGRI_					0	0	0			REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|344|2|anti-sense	REV__HERVE_a-int_dup43|chr4:35101011-35108768:+|1.9644866441523825|0.032038650355775|5.94|413.0|344|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7649719119072	2	491.764501	981.514448	1.8122	0.00089115	-0.86567	-0.00042571	0.94649	0.00046545	491.76393078837253	48.954	0.34666	48.954	48.778	49.125	0					26	10	3	0	0	0	0.82039	1	20502	20502		19.439	0	1	3167800	+		31075	14187	15386	15448	35839	35839					0.022951425687210758
SIHRKRMPVK	10	Unmodified	_SIHRKRMPVK_					0	0	0		ENSG00000100226|ENST00000216044|GTPBP1	ENSG00000100226|ENST00000216044|GTPBP1	ENSG00000100226|ENST00000216044|GTPBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9213134646416	3	417.920403	1250.73938	0.28031	0.00011715	2.3145	0.00096728	2.5948	0.0010844	417.9212062468807	30.646	0.54891	30.646	30.347	30.896	0					60	17	4	0	0	0	0.89803	2	12761	12761;12920		0.62683	0.62683	1	7871500			31076	1255	15387	15449	35840;35841	35840					0.12403929047354723
SIHSARYIFVE	11	Unmodified	_SIHSARYIFVE_					0	0	0		nc|ENSG00000166548|O00142-6|TK2;nc|ENSG00000166548|O00142-5|TK2;nc|ENSG00000166548|O00142-2|TK2;nc|ENSG00000166548|O00142-3|TK2;nc|ENSG00000166548|O00142-4|TK2;ENSG00000166548|ENST00000544898|TK2	nc|ENSG00000166548|O00142-6|TK2	nc|ENSG00000166548|O00142-6|TK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.3488036990166	2	661.348594	1320.68264	3.9681	0.0026243	-1.3644	-0.00090237	2.6037	0.0017219	661.3477475959577	91.052	0.25453	92.034	91.878	92.133	0.98157					12	7	2	0	0	0	0.70499	1	38370	38370		18.146	3.3081	1	512070			31077	7919	15388	15450	35842	35842					0.03512159971796791
SIHWTWIRNRR	11	Unmodified	_SIHWTWIRNRR_					0	0	0			REV__ENST00000368662.9_1_6:112397672-112400876:-|nuORF	REV__ENST00000368662.9_1_6:112397672-112400876:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	762.9644653201103	2	762.918375	1523.8222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.76	1	112.91	112.41	113.41	0.14912								0	0	0	0.63775	1	48841	48841		5.2969	0	1		+		31078	12643	15389	15451	35843	35843					0.08123962099716664
SIIAIVSSV	9	Unmodified	_SIIAIVSSV_					0	0	0		tr|A0A7D6VWI7|A0A7D6VWI7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08520PE=4SV=1	tr|A0A7D6VWI7|A0A7D6VWI7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08520PE=4SV=1	tr|A0A7D6VWI7|A0A7D6VWI7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08520PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1205322146416	2	444.773668	887.532783	3.3675	0.0014978	-0.33408	-0.00014859	3.0335	0.0013492	444.77341999713764	81.303	0.33987	82.999	82.766	83.106	1.6959					26	10	3	0	0	0	0.08828	1	34038	34038		21.747	0	1	8453900			31079	16975	15390	15452	35844	35844					0.08451839700046548
SIIDDLNTVV	10	Unmodified	_SIIDDLNTVV_					0	0	0		tr|A0A7D6VS64|A0A7D6VS64_9CLOTLargeribosomalsubunitproteinbL25OS=ClostridiumintestinaleOX=36845GN=rplYPE=3SV=1	tr|A0A7D6VS64|A0A7D6VS64_9CLOTLargeribosomalsubunitproteinbL25OS=ClostridiumintestinaleOX=36845GN=rplYPE=3SV=1	tr|A0A7D6VS64|A0A7D6VS64_9CLOTLargeribosomalsubunitproteinbL25OS=ClostridiumintestinaleOX=36845GN=rplYPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.7977783083916	2	544.795329	1087.5761	1.5494	0.00084411	0.93406	0.00050887	2.4835	0.001353	544.795512993118	77.611	0.24794	77.611	77.44	77.688	0					13	7	2	0	0	0	0.78468	1	32265	32265		13.906	0	1	1150600			31080	16858	15391	15453	35845	35845					0.03581984686684336
SIIDDRVIL	9	Unmodified	_SIIDDRVIL_					0	0	0		nc|ENSG00000165475|Q9Y2S2-2|CRYL1;ENSG00000165475|ENST00000298248|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3090698122978	2	522.308406	1042.60226	1.6484	0.00086099	1.5581	0.00081383	3.2066	0.0016748	522.3097473887333	54.052	0.20068	55.456	55.35	55.551	1.4048					10	6	2	0	0	0	0.13623	1	22640	22640		40.239	9.6027	1	926340			31081	3841	15392	15454	35846	35846					0.08266298648823067
SIIDDRVIL	9	Unmodified	_SIIDDRVIL_					0	0	0		nc|ENSG00000165475|Q9Y2S2-2|CRYL1;ENSG00000165475|ENST00000298248|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	nc|ENSG00000165475|Q9Y2S2-2|CRYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3094360232353	2	522.308406	1042.60226	0.74474	0.00038898	-0.64622	-0.00033753	0.098516	5.1456E-05	522.309521576796	53.57	0.21783	55.54	55.44	55.658	1.9697					13	6	3	0	0	0	0.19659	1	22443	22443		33.445	9.4243	1	1391600			31082	3841	15392	15454	35847	35847					0.08266298648823067
SIIDILQNAP	10	Unmodified	_SIIDILQNAP_					0	0	0			REV__ENSG00000076321|ENST00000209884|KLHL20	REV__ENSG00000076321|ENST00000209884|KLHL20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3093139529228	2	542.305864	1082.59717	3.709	0.0020114	2.6267	0.0014245	6.3358	0.0034359	542.3070757784719	81.809	0.43275	83.022	82.822	83.255	1.2125					34	13	3	0	0	0	0.41677	1	34301	34301		32.305	5.4218	1	6572400	+		31083	8769	15393	15455	35848	35848					0.05917994786182135
SIIDPVPLD	9	Unmodified	_SIIDPVPLD_					0	0	0			REV__ENSG00000203995|ENST00000371528|ZYG11A	REV__ENSG00000203995|ENST00000371528|ZYG11A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	968.5265380740166	1	968.529889	967.522613	1.6507	0.0015988	-1.9237	-0.0018631	-0.27293	-0.00026434	968.5279228026503	67.144	0.29794	67.144	66.99	67.288	0					15	9	2	0	0	0	0.083604	1	27953	27953		54.774	0	1	951200	+		31084	11768	15394	15456	35849	35849					0.037552319747987895
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1046.555834949017	1	1046.55169	1045.54441	1.9719	0.0020637	-2.4999	-0.0026162	-0.52795	-0.00055253	1046.5496542013652	93.312	0.37944	93.312	93.076	93.455	0					18	11	2	0	0	0	0.033504	2	38974	38974;39033		81.89	35.869	1	1048600			31085	2484	15395	15457	35850;35851	35850					0.023460367233838042
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.7809326052666	2	523.779482	1045.54441	2.1271	0.0011141	-0.052047	-2.7261E-05	2.075	0.0010869	523.7794486787499	93.281	0.31537	93.281	93.107	93.422	0					15	9	2	0	0	0	0.59203	1	38999	38999		11.64	0.81637	1	843540			31086	2484	15395	15457	35852	35852					0.023460367233838042
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1046.556689441204	1	1046.55169	1045.54441	4.0315	0.0042192	-0.1954	-0.0002045	3.8361	0.0040147	1046.5509717188704	92.258	0.42041	93.194	92.988	93.408	0.93623					21	12	2	0	0	0	0.0069529	2	38870	38823;38870		114.65	35.563	1	3261100			31087	2484	15395	15457	35853;35854	35854					0.023460367233838042
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7806884646416	2	523.779482	1045.54441	4.2452	0.0022236	-1.5482	-0.0008109	2.697	0.0014127	523.7787753898696	92.251	0.38737	93.187	92.988	93.375	0.93623					20	11	3	0	0	0	0.20671	1	38838	38838		32.305	14.159	1	974130			31088	2484	15395	15457	35855	35855					0.023460367233838042
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7811157107353	2	523.779482	1045.54441	3.256	0.0017054	-0.10856	-5.6859E-05	3.1474	0.0016486	523.7800212978385	91.89	0.35181	93.217	93.021	93.373	1.3269					23	10	3	0	0	0	0.049839	2	38700	38652;38700		68.081	13.074	1	1696500			31089	2484	15395	15457	35856;35857	35857					0.023460367233838042
SIIDWLNSV	9	Unmodified	_SIIDWLNSV_					0	0	0		ENST00000558657.1_1_15:50086592-50087141:+|nuORF;ENSG00000131263|ENST00000332687|RLIM	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	ENST00000558657.1_1_15:50086592-50087141:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1046.558154284954	1	1046.55169	1045.54441	4.2905	0.0044902	-0.097721	-0.00010227	4.1927	0.0043879	1046.5502303037506	91.859	0.35181	93.186	93.021	93.373	1.3269					17	10	2	0	0	0	0.026734	2	38667	38667;38715		92.653	30.275	1	1994400			31090	2484	15395	15457	35858;35859	35858					0.023460367233838042
SIIGERGRL	9	Unmodified	_SIIGERGRL_					0	0	0		CON__P50446	CON__P50446	CON__P50446	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7995483279228	2	500.79854	999.582528	2.6198	0.001312	-0.047676	-2.3876E-05	2.5722	0.0012881	500.79832869045686	76.559	0.65485	77.853	77.607	78.262	1.2938					48	20	3	0	0	0	0.7849	1	32129	32129		3.9444	0	1	3125500		+	31091	352	15396	15458	35860	35860					0.08271967428709104
SIIGLPVILI	10	Unmodified	_SIIGLPVILI_					0	0	0		tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.3526489138603	2	519.352086	1036.68962	2.0769	0.0010787	-0.8198	-0.00042576	1.2571	0.0006529	519.3516215200924	76.121	0.6454	76.121	75.852	76.497	0					59	20	4	0	0	0	0.04351	2	31686	31636;31686		81.613	0	1	32551000			31092	16317	15397	15459	35861;35862	35862					0.1727412459038078
SIIGLPVILI	10	Unmodified	_SIIGLPVILI_					0	0	0		tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.3531982302666	2	519.352086	1036.68962	2.6102	0.0013556	-0.42508	-0.00022077	2.1851	0.0011349	519.3518860416787	75.467	0.68972	75.788	75.519	76.209	0.32163					60	21	4	0	0	0	0.11481	1	31549	31549		61.357	0	1	31708000			31093	16317	15397	15459	35863	35863					0.1727412459038078
SIIGLPVILI	10	Unmodified	_SIIGLPVILI_					0	0	0		tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3542358279228	2	519.352086	1036.68962	3.5499	0.0018437	0.83534	0.00043384	4.3853	0.0022775	519.3525521922313	74.227	0.60883	75.545	75.279	75.888	1.318					67	19	5	0	0	0	0.09859	1	31213	31213		64.236	0	1	79949000			31094	16317	15397	15459	35864	35864					0.1727412459038078
SIIGLPVILI	10	Unmodified	_SIIGLPVILI_					0	0	0		tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	tr|A0A553SL06|A0A553SL06_NIACIStageIIsporulationproteinMOS=NialliacirculansOX=1397GN=spoIIMPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.3539306521416	2	519.352086	1036.68962	2.9511	0.0015327	0.6443	0.00033462	3.5954	0.0018673	519.3524444025021	73.724	1.0509	75.52	75.224	76.275	1.7962					85	33	5	0	0	0	0.09859	1	30991	30991		64.236	2.8788	1	63357000			31095	16317	15397	15459	35865	35865					0.1727412459038078
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3141967654228	2	500.313492	998.612431	1.4922	0.00074658	0.22163	0.00011088	1.7139	0.00085746	500.3134663813848	69.058	1.6268	69.058	68.737	70.364	0					123	51	5	0	0	0	0.045139	8	28788	28669;28711;28749;28788;28827;28867;28910;29019		71.708	17.875	1	53096000			31096	4242	15398	15460	35866;35867;35868;35869;35870;35871;35872;35873	35869					0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3145019412041	2	500.313492	998.612431	2.1452	0.0010733	0.17022	8.5162E-05	2.3154	0.0011584	500.3135697268043	68.414	0.81176	68.737	68.408	69.22	0.32223					84	25	5	0	0	0	0.034867	6	28588	28588;28626;28665;28704;28749;28796		80.676	26.843	1	60185000			31097	4242	15398	15460	35874;35875;35876;35877;35878;35879	35874					0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3148071169853	2	500.313492	998.612431	1.8512	0.0009262	-0.42441	-0.00021234	1.4268	0.00071386	500.31344813495105	67.152	0.89201	68.541	68.215	69.107	1.3888					91	28	5	0	0	0	0.042285	6	28086	28086;28132;28185;28237;28278;28336		74.2	17.875	1	218880000			31098	4242	15398	15460	35880;35881;35882;35883;35884;35885	35880					0.11306906374034043
SIIGRLLEV	9	Unmodified	_SIIGRLLEV_					0	0	0		ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	ENSG00000172531|ENST00000376745|PPP1CA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3147765994072	2	500.313492	998.612431	1.2815	0.00064115	-0.011202	-5.6048E-06	1.2703	0.00063554	500.3136772862126	66.623	0.92712	68.512	68.182	69.109	1.8889					89	29	5	0	0	0	0.042285	5	27922	27873;27922;27961;28013;28071		74.2	11.641	1	208840000			31099	4242	15398	15460	35886;35887;35888;35889;35890	35887					0.11306906374034043
SIIKTIKKG	9	Unmodified	_SIIKTIKKG_					0	0	0			REV__AFAP1-KCNIP4|1|fusion	REV__AFAP1-KCNIP4|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3336364626884	2	494.331685	986.648816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.75	1	104.75	104.25	105.25	0								0	0	0	0.42693	1	44292	44292		0.52476	0	1		+		31100	8091	15399	15461	35891	35891					0.154957832707737
SIIKWEKY	8	Unmodified	_SIIKWEKY_					0	0	0			REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1913329958916	2	533.800217	1065.58588	1.6256	0.00086776	-3.4244	-0.001828	-1.7988	-0.00096022	533.7983690819299	39.148	0.49143	39.148	38.837	39.328	0					26	15	3	0	0	0	2.3239	1	16446	16446		5.2307	3.1709	1	1949700	+		31101	10892	15400	15462	35892	35892					0.055712174827021954
SIILLLSIKKF	11	Unmodified	_SIILLLSIKKF_					0	0	0			REV__tr|A0A7D6VSD7|A0A7D6VSD7_9CLOTPenicillin-bindingtranspeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08865PE=3SV=1	REV__tr|A0A7D6VSD7|A0A7D6VSD7_9CLOTPenicillin-bindingtranspeptidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08865PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	320.1707336306572	4	319.466613	1273.83735	-2.53	-0.00080825	-3.4113	-0.0010898	-5.9413	-0.0018981	319.46532889288363	33.567	0.40362	33.567	33.265	33.668	0					17	12	2	0	0	0	0.14606	1	13956	13956		0.094841	0	1	407570	+		31102	15444	15401	15463	35893	35893					0.21138016124359638
SIILNRLSV	9	Unmodified	_SIILNRLSV_					0	0	0			REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8215209841728	2	507.818941	1013.62333	2.129	0.0010811	1.6337	0.00082961	3.7627	0.0019108	507.81949385011353	43.336	0.23482	45.279	45.134	45.368	1.9438					12	7	2	0	0	0	0.30098	1	18155	18155		25.399	0	1	969320	+		31103	15107	15402	15464	35894	35894					0.11706308748341598
SIILNRLSV	9	Unmodified	_SIILNRLSV_					0	0	0			REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	507.818941	1013.62333	2.5237	0.0012816	1.1709	0.00059461	3.6947	0.0018762	507.8190598044833	43.987	0.21726	45.341	45.222	45.439	1.3536	0.030784	-0.00025929	NaN	25.399	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1041100	+		31104	15107	15402	15464							0.11706308748341598
SIILNRLSV	9	Unmodified	_SIILNRLSV_					0	0	0			REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	REV__tr|A0A553SPV0|A0A553SPV0_NIACIMagnesiumtransporterMgtEOS=NialliacirculansOX=1397GN=mgtEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.818941	1013.62333	2.129	0.0010811	1.6337	0.00082961	3.7627	0.0019108	507.81949385011353	43.336	0.23482	45.279	45.134	45.368	1.9438	-0.030784	0.00021071	NaN	25.399	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	969320	+		31105	15107	15402	15464							0.11706308748341598
SIINHIRIL	9	Unmodified	_SIINHIRIL_					0	0	0		nc|ENSG00000183826|Q96Q07-3|BTBD9;nc|ENSG00000183826|Q96Q07-2|BTBD9;ENSG00000183826|ENST00000481247|BTBD9	nc|ENSG00000183826|Q96Q07-3|BTBD9	nc|ENSG00000183826|Q96Q07-3|BTBD9	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8406860232353	2	539.840208	1077.66586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.121	1	46.065	45.565	46.565	1.9438								0	0	0	0.21022	1	18496	18496		25.399	7.253	1				31106	4670	15403	15465	35895	35895					0.13013703876549698
SIIQRLLEV	9	Unmodified	_SIIQRLLEV_					0	0	0		nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	nc|ENSG00000186298|P36873-2|PPP1CC	nc|ENSG00000186298|P36873-2|PPP1CC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8344604372978	2	535.832049	1069.64954	3.17	0.0016986	-0.20822	-0.00011157	2.9618	0.001587	535.8320000761088	70.66	0.44582	72.013	71.807	72.253	1.3536					30	13	3	0	0	0	0.0011269	2	29670	29620;29670		133.05	47.411	1	5397300			31107	4785	15404	15466	35896;35897	35897					0.11750577919792704
SIIQRLLEV	9	Unmodified	_SIIQRLLEV_					0	0	0		nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	nc|ENSG00000186298|P36873-2|PPP1CC	nc|ENSG00000186298|P36873-2|PPP1CC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8332397341728	2	535.832049	1069.64954	2.5403	0.0013612	-1.4738	-0.0007897	1.0666	0.0005715	535.8316041249263	70.07	0.48054	71.908	71.656	72.136	1.8378					34	14	3	0	0	0	0.032536	2	29393	29393;29434		83.429	31.122	1	3481600			31108	4785	15404	15466	35898;35899	35898					0.11750577919792704
SIIQRLLEV	9	Unmodified	_SIIQRLLEV_					0	0	0		nc|ENSG00000186298|P36873-2|PPP1CC;ENSG00000186298|ENST00000335007|PPP1CC;PPP1CC|p.D71Vfs*43|1|0.28|ENSG00000186298|chr12:110730735-110730736|-/TA|frameshift_variant	nc|ENSG00000186298|P36873-2|PPP1CC	nc|ENSG00000186298|P36873-2|PPP1CC	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	535.832049	1069.64954	1.6518	0.00088508	0.69571	0.00037279	2.3475	0.0012579	535.8322528011943	72.541	0.41354	72.541	72.332	72.745	0	0.37468	0.00080425	NaN	133.05	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2259200			31109	4785	15404	15466							0.11750577919792704
SIISETSNK	9	Unmodified	_SIISETSNK_					0	0	0		ENST00000260054.8_1_11:82972955-82984922:-|nuORF;nc|ENSG00000137500|Q9GZT6-3|CCDC90B;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;ENSG00000137500|ENST00000529689|CCDC90B	ENST00000260054.8_1_11:82972955-82984922:-|nuORF	ENST00000260054.8_1_11:82972955-82984922:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	489.3063232302666	2	489.758746	977.50294	3.2799	0.0016063	-4.4042	-0.002157	-1.1243	-0.00055066	489.7557562004014	74.912	0.18742	75.237	75.174	75.361	0.32464					8	5	2	0	0	0	0.076673	1	31332	31332		29.082	10.947	1	260530			31110	2771	15405	15467	35900	35900					0.01328855964061404
SIISETSNK	9	Unmodified	_SIISETSNK_					0	0	0		ENST00000260054.8_1_11:82972955-82984922:-|nuORF;nc|ENSG00000137500|Q9GZT6-3|CCDC90B;nc|ENSG00000137500|Q9GZT6-2|CCDC90B;ENSG00000137500|ENST00000529689|CCDC90B	ENST00000260054.8_1_11:82972955-82984922:-|nuORF	ENST00000260054.8_1_11:82972955-82984922:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.758746	977.50294	3.5529	0.0017401	-9.5258	-0.0046654	-5.9729	-0.0029253	489.754108409322	73.902	0.24887	75.22	75.125	75.374	1.318	-0.008375	-0.0014515	NaN	17.113	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	502240			31111	2771	15405	15467							0.01328855964061404
SIKAPWSVL	9	Unmodified	_SIKAPWSVL_					0	0	0		ENST00000342444.8_1_10:73970511-73973025:-|nuORF	ENST00000342444.8_1_10:73970511-73973025:-|nuORF	ENST00000342444.8_1_10:73970511-73973025:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7966186404228	2	500.794935	999.575317	2.5425	0.0012733	1.9227	0.00096287	4.4651	0.0022361	500.7957059800466	59.449	0.40494	60.869	60.648	61.053	1.4196					22	12	2	0	0	0	0.081597	2	24938	24886;24938		55.503	23.197	1	3160600			31112	5940	15406	15468	35901;35902	35902					0.07551234828270026
SIKAPWSVL	9	Unmodified	_SIKAPWSVL_					0	0	0		ENST00000342444.8_1_10:73970511-73973025:-|nuORF	ENST00000342444.8_1_10:73970511-73973025:-|nuORF	ENST00000342444.8_1_10:73970511-73973025:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7972900271416	2	500.794935	999.575317	2.1643	0.0010839	1.6371	0.00081986	3.8014	0.0019037	500.7959421407672	58.885	0.37324	60.854	60.694	61.067	1.969					29	11	3	0	0	0	0.13623	2	24704	24704;24771		40.239	6.1368	1	2830600			31113	5940	15406	15468	35903;35904	35903					0.07551234828270026
SIKKIINQMKP	11	Unmodified	_SIKKIINQMKP_					0	0	0		ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	ENSG00000165934|ENST00000298875|CPSF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3953124880791	2	650.39449	1298.77443	1.9699	0.0012812	1.2665	0.00082373	3.2364	0.0021049	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0366	1	34027	34027		1.1933	0	1	10064000			31114	3869	15407	15469	35905	35905					0.13699127064683125
SIKMYLRP	8	Unmodified	_SIKMYLRP_					0	0	0			REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2893859744072	2	504.288963	1006.56337	1.4142	0.00071317	0.15897	8.0169E-05	1.5732	0.00079333	504.28781630589856	98.434	0.10638	98.434	98.372	98.479	0					8	3	3	0	0	0	0.71791	1	41153	41153		28.487	1.6032	1	16781000	+		31115	9053	15408	15470	35906	35906					0.060352948134323015
SIKMYLRP	8	Unmodified	_SIKMYLRP_					0	0	0			REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	504.288963	1006.56337	1.4142	0.00071317	0.15897	8.0169E-05	1.5732	0.00079333	504.28781630589856	98.434	0.10638	98.434	98.372	98.479	0	0.0046088	0.0016427	NaN	28.487	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16781000	+		31116	9053	15408	15470							0.060352948134323015
SIKMYLRP	8	Unmodified	_SIKMYLRP_					0	0	0			REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	504.288963	1006.56337	3.1648	0.001596	-3.1714	-0.0015993	-0.006653	-3.355E-06	504.78951179665376	98.35	0.085876	98.43	98.36	98.446	0.080376	0.00086798	-0.0017163	NaN	28.487	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4390500	+		31117	9053	15408	15470							0.060352948134323015
SIKMYLRP	8	Unmodified	_SIKMYLRP_					0	0	0			REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	REV__ENST00000460773.5_1_X:138814597-138879340:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.288963	1006.56337	3.7916	0.0019121	-1.175	-0.00059255	2.6166	0.0013195	504.7901929872573	98.196	0.10583	98.424	98.362	98.468	0.22776	-0.0054768	0.00029724	NaN	28.487	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6431500	+		31118	9053	15408	15470							0.060352948134323015
SIKNPPPKQL	10	Unmodified	_SIKNPPPKQL_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.8373290896416	2	561.337498	1120.66044	1.3382	0.00075119	-1.7228	-0.00096707	-0.38458	-0.00021588	561.3374597727031	77.845	0.18756	77.845	77.717	77.905	0					8	5	2	0	0	0	0.88314	1	32407	32407		3.2813	0	1	601400	+		31119	9866	15409	15471	35907	35907					0.10493980294063476
SIKNPPPKQL	10	Unmodified	_SIKNPPPKQL_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	561.337498	1120.66044	1.3382	0.00075119	-1.7228	-0.00096707	-0.38458	-0.00021588	561.3374597727031	77.845	0.18756	77.845	77.717	77.905	0	-0.044981	0.0027397	NaN	3.2813	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	601400	+		31120	9866	15409	15471							0.10493980294063476
SIKNPPPKQL	10	Unmodified	_SIKNPPPKQL_					0	0	0			REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	REV__nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	561.337498	1120.66044	1.8555	0.0010416	-4.7506	-0.0026667	-2.8951	-0.0016251	561.3349076323619	77.618	0.31235	77.935	77.826	78.138	0.31653	0.044981	-0.00065955	NaN	3.2813	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444810	+		31121	9866	15409	15471							0.10493980294063476
SIKSNSVLKN	10	Unmodified	_SIKSNSVLKN_					0	0	0		tr|A0A553SIK5|A0A553SIK5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15045PE=4SV=1	tr|A0A553SIK5|A0A553SIK5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15045PE=4SV=1	tr|A0A553SIK5|A0A553SIK5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3180419802666	2	545.316763	1088.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.71	1	72.034	71.534	72.534	0.32359								0	0	0	0.66052	1	30008	30008		3.5965	0	1				31122	16207	15410	15472	35908	35908					0.07820799534761136
SIKTRPRT	8	Unmodified	_SIKTRPRT_					0	0	0			REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.7950317263603	2	479.793258	957.571963	3.1858	0.0015285	-1.1034	-0.0005294	2.0824	0.00099913	479.79258500155885	75.659	1.2408	75.981	75.55	76.791	0.32163					82	39	3	0	0	0	0.88791	1	31558	31558		3.9444	1.0552	1	3050500	+		31123	11355	15411	15473	35909	35909					0.0914798477426757
SIKTRPRT	8	Unmodified	_SIKTRPRT_					0	0	0			REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	479.793258	957.571963	3.1858	0.0015285	-1.1034	-0.0005294	2.0824	0.00099913	479.79258500155885	75.659	1.2408	75.981	75.55	76.791	0.32163	-0.13572	-0.00097771	NaN	3.9444	82	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3050500	+		31124	11355	15411	15473							0.0914798477426757
SIKTRPRT	8	Unmodified	_SIKTRPRT_					0	0	0			REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	REV__SATB1|p.N758Ifs*4|1|0.11|ENSG00000182568|chr3:18349189-18349189|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	479.793258	957.571963	3.1768	0.0015242	0.71737	0.00034419	3.8942	0.0018684	479.79308043084785	74.787	0.79829	76.093	75.756	76.555	1.3063	-0.023354	0.00076947	NaN	3.9444	46	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	838280	+		31125	11355	15411	15473							0.0914798477426757
SILDIVTKV	9	Unmodified	_SILDIVTKV_					0	0	0		ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3106262087822	2	494.307875	986.601197	1.3247	0.00065479	2.0073	0.00099221	3.3319	0.001647	494.3091880817758	71.43	0.28436	71.43	71.288	71.573	0					20	8	3	0	0	0	0.046715	2	29732	29732;29783		70.332	12.61	1	1408200			31126	3655	15412	15474	35910;35911	35910					0.10736084279915303
SILDIVTKV	9	Unmodified	_SILDIVTKV_					0	0	0		ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3093444705009	2	494.307875	986.601197	2.096	0.0010361	1.6809	0.00083087	3.7769	0.001867	494.30889696360987	70.876	0.34895	71.2	70.987	71.336	0.32359					21	10	3	0	0	0	0.036104	2	29656	29656;29702		79.596	13.14	1	1507400			31127	3655	15412	15474	35912;35913	35912					0.10736084279915303
SILDIVTKV	9	Unmodified	_SILDIVTKV_					0	0	0		ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3095275759697	2	494.307875	986.601197	2.492	0.0012318	2.0156	0.00099635	4.5076	0.0022282	494.30912544288896	69.729	0.37871	71.083	70.864	71.243	1.3536					27	11	3	0	0	0	0.02878	1	29266	29266		89.401	13.64	1	4751100			31128	3655	15412	15474	35914	35914					0.10736084279915303
SILDIVTKV	9	Unmodified	_SILDIVTKV_					0	0	0		ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3106567263603	2	494.307875	986.601197	1.6433	0.00081228	2.3553	0.0011642	3.9985	0.0019765	494.30904956227505	69.204	0.43246	71.057	70.798	71.23	1.853					28	13	3	0	0	0	0.03071	1	29070	29070		86.332	19.875	1	4900600			31129	3655	15412	15474	35915	35915					0.10736084279915303
SILEAVPQV	9	Unmodified	_SILEAVPQV_					0	0	0		ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.2771179080009	2	478.276575	954.538597	2.5948	0.001241	0.60816	0.00029087	3.203	0.0015319	478.2768355709988	59.793	0.51565	61.213	61.02	61.536	1.4196					25	16	2	0	0	0	0.10294	1	25110	25110		48.346	16.04	1	1620100			31130	2761	15413	15475	35916	35916					0.0595093821170849
SILEAVPQV	9	Unmodified	_SILEAVPQV_					0	0	0		ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	ENSG00000137198|ENST00000259727|GMPR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	478.7499877810478	2	478.276575	954.538597	2.7197	0.0013008	0.38725	0.00018521	3.1069	0.001486	478.2766607602655	59.353	0.3878	61.322	61.162	61.55	1.969					23	12	3	0	0	0	0.0077292	1	24916	24916		48.346	16.04	1	1261200			31131	2761	15413	15475	35917	35917					0.0595093821170849
SILEDPPSI	9	Unmodified	_SILEDPPSI_					0	0	0		nc|ENSG00000064102|Q9NVM9-2|INTS13;ENSG00000064102|ENST00000261191|INTS13	nc|ENSG00000064102|Q9NVM9-2|INTS13	nc|ENSG00000064102|Q9NVM9-2|INTS13	MSMS	GG20161007_CRH_Patient100_W632_01	3	485.7584411501884	2	485.758215	969.501877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.127	1	56.532	56.032	57.032	1.4048								0	0	0	0.041747	1	23082	23082		46.021	6.0636	1				31132	766	15414	15476	35918	35918					0.015906415951349118
SILEHQIQV	9	Unmodified	_SILEHQIQV_					0	0	0		MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant;ENSG00000104738|ENST00000649973|MCM4	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7993652224541	2	533.798206	1065.58186	0.54253	0.0002896	-0.24291	-0.00012967	0.29962	0.00015993	533.7981434866358	37.213	0.25193	38.497	38.327	38.579	1.284					38	21	2	0	0	0	0.019486	1	15607	15607		99.755	21.027	1	4433700			31133	1473	15415	15477	35919	35919					0.05169127988983746
SILEHQIQV	9	Unmodified	_SILEHQIQV_					0	0	0		MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant;ENSG00000104738|ENST00000649973|MCM4	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7983886599541	2	533.798206	1065.58186	1.0024	0.00053508	-1.0238	-0.00054653	-0.021448	-1.1449E-05	533.7975722122429	36.608	0.2072	38.426	38.289	38.496	1.8176					24	15	2	0	0	0	0.02878	1	15356	15356		89.401	20.296	1	7058600			31134	1473	15415	15477	35920	35920					0.05169127988983746
SILEKFSV	8	Unmodified	_SILEKFSV_					0	0	0		nc|ENSG00000116539|Q9NR48|ASH1L;ENSG00000116539|ENST00000392403|ASH1L;ASH1L|p.S1069Pfs*5|1|0.07|ENSG00000116539|chr1:155479664-155479665|CT/-|frameshift_variant	nc|ENSG00000116539|Q9NR48|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1465637087822	2	461.765843	921.517133	2.9562	0.0013651	1.1543	0.00053301	4.1105	0.0018981	461.76587726118055	78.732	0.28333	79.999	79.909	80.193	1.2668					11	8	2	0	0	0	2.3239	1	33079	33079		5.2307	0	1	341280			31135	1971	15416	15478	35921	35921					0.053235531830068794
SILESFIHV	9	Unmodified	_SILESFIHV_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7906982302666	2	522.78985	1043.56515	2.1524	0.0011252	1.9937	0.0010423	4.146	0.0021675	522.7900797470332	72.546	0.21742	72.871	72.737	72.954	0.32494					13	6	3	0	0	0	0.24063	1	30338	30338		28.487	5.3384	1	596910			31136	905	15417	15479	35922	35922					0.04510627103036313
SILESFIHV	9	Unmodified	_SILESFIHV_					0	0	0		ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	ENSG00000073910|ENST00000542859|FRY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7923461794853	2	522.78985	1043.56515	1.7996	0.00094083	-0.41926	-0.00021918	1.3804	0.00072165	522.7897016858185	71.734	0.89124	73.075	72.512	73.403	1.3415					85	28	4	0	0	0	0.12174	1	29961	29961		42.095	6.0504	1	30726000			31137	905	15417	15479	35923	35923					0.04510627103036313
SILFFFMLLTL	11	Unmodified	_SILFFFMLLTL_					0	0	0		ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.8837768435478	2	672.885435	1343.75632	1.3707	0.00092234	-0.71557	-0.0004815	0.65515	0.00044084	672.884909161183	58.795	0.37696	60.213	60.003	60.38	1.4181					38	11	5	0	0	0	0.038204	1	24690	24690		71.922	15.745	1	18429000			31138	5439	15418	15480	35924	35924					0.09818992089981293
SILFFFMLLTL	11	Unmodified	_SILFFFMLLTL_					0	0	0		ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.8851196169853	2	672.885435	1343.75632	1.023	0.00068834	0.15786	0.00010622	1.1808	0.00079456	672.8855777507916	58.294	0.37604	60.263	60.053	60.429	1.969					35	11	4	0	0	0	0.11083	1	24497	24497		53.833	5.4869	1	18774000			31139	5439	15418	15480	35925	35925					0.09818992089981293
SILFFFMLLTL	11	Unmodified	_SILFFFMLLTL_					0	0	0		ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	ENSG00000268104|ENST00000598581|SLC6A14	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	672.885435	1343.75632	2.3608	0.0015885	-0.59316	-0.00039913	1.7676	0.0011894	672.8847839560092	60.557	0.32213	60.557	60.412	60.734	0	0.22379	-6.7882E-05	NaN	71.922	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1678700			31140	5439	15418	15480							0.09818992089981293
SILGEKKTS	9	Unmodified	_SILGEKKTS_					0	0	0		tr|A0A7D6VU65|A0A7D6VU65_9CLOTCoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=ClostridiumintestinaleOX=36845GN=coaBCPE=3SV=1	tr|A0A7D6VU65|A0A7D6VU65_9CLOTCoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=ClostridiumintestinaleOX=36845GN=coaBCPE=3SV=1	tr|A0A7D6VU65|A0A7D6VU65_9CLOTCoenzymeAbiosynthesisbifunctionalproteinCoaBCOS=ClostridiumintestinaleOX=36845GN=coaBCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7803222537041	2	481.779482	961.544411	2.5771	0.0012416	-0.11102	-5.3488E-05	2.466	0.0011881	481.77939262396785	59.772	0.40035	61.192	60.99	61.39	1.4196					37	12	4	0	0	0	0.46905	1	25106	25106		16.942	16.942	1	39208000			31141	16940	15419	15481	35926	35926					0.06210036723382473
SILGKVHF	8	Unmodified	_SILGKVHF_					0	0	0		ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENST00000544151.1_1_12:21807353-21810687:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.7726928591728	2	450.76872	899.522887	2.4701	0.0011135	4.4058	0.001986	6.876	0.0030995	450.77061597893646	83.012	0.40815	84.652	84.384	84.792	1.6396					26	12	3	0	0	0	0.89152	1	34809	34809		2.5775	0.27475	1	2225500			31142	7227	15420	15482	35927	35927					0.06910696485317658
SILHDVVEV	9	Unmodified	_SILHDVVEV_					0	0	0		ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.7811462283134	2	505.779482	1009.54441	2.1133	0.0010688	-0.35879	-0.00018147	1.7545	0.00088738	505.7796592226345	47.223	0.31839	47.223	47.022	47.34	0					20	9	3	0	0	0	0.042029	2	19740	19691;19740		74.423	26.287	1	2140400			31143	1153	15421	15483	35928;35929	35929					0.04002036723386482
SILHDVVEV	9	Unmodified	_SILHDVVEV_					0	0	0		ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.7805358767509	2	505.779482	1009.54441	2.1086	0.0010665	0.078558	3.9733E-05	2.1872	0.0011062	505.77929949998224	46.744	0.32337	47.075	46.878	47.201	0.33034					26	10	3	0	0	0	0.042029	2	19613	19567;19613		74.423	32.328	1	1624600			31144	1153	15421	15483	35930;35931	35931					0.04002036723386482
SILHDVVEV	9	Unmodified	_SILHDVVEV_					0	0	0		ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.7791625857353	2	505.779482	1009.54441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.879	1	47.209	46.709	47.709	0.33034								0	0	0	0.317	1	19666	19666		16.942	5.302	1				31145	1153	15421	15483	35932	35932					0.04002036723386482
SILHDVVEV	9	Unmodified	_SILHDVVEV_					0	0	0		ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7806884646416	2	505.779482	1009.54441	2.6542	0.0013425	-0.060974	-3.0839E-05	2.5933	0.0013116	505.77944339502636	45.208	0.38916	46.573	46.369	46.758	1.3653					31	11	4	0	0	0	0.026628	3	18947	18904;18947;18989		92.822	32.328	1	7059000			31146	1153	15421	15483	35933;35934;35935	35934					0.04002036723386482
SILHDVVEV	9	Unmodified	_SILHDVVEV_					0	0	0		ENST00000572148.1_1_17:4863453-4863890:-|nuORF;ENSG00000091640|ENST00000206020|SPAG7	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	ENST00000572148.1_1_17:4863453-4863890:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7810546755791	2	505.779482	1009.54441	1.9943	0.0010087	1.0083	0.00050996	3.0026	0.0015186	505.77993819858364	44.659	0.35088	46.619	46.448	46.799	1.9596					32	10	4	0	0	0	0.031324	3	18720	18676;18720;18760		85.357	26.077	1	6414600			31147	1153	15421	15483	35936;35937;35938	35937					0.04002036723386482
SILIVMIMV	9	Unmodified	_SILIVMIMV_					0	0	0		tr|A0A7D6VSQ1|A0A7D6VSQ1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11535PE=4SV=1	tr|A0A7D6VSQ1|A0A7D6VSQ1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11535PE=4SV=1	tr|A0A7D6VSQ1|A0A7D6VSQ1_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8047057986259	2	509.805599	1017.59665	2.0502	0.0010452	-0.75039	-0.00038256	1.2998	0.00066265	509.80470563200663	67.746	0.83211	69.616	69.147	69.979	1.87					45	26	2	0	0	0	0.66839	1	28335	28335		8.5933	0	1	1041600			31148	16879	15422	15484	35939	35939					0.08855160541122586
SILKRHRPYR	10	Unmodified	_SILKRHRPYR_					0	0	0			REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.6020995974541	3	442.60195	1324.78402	1.8699	0.00082764	-1.924	-0.00085158	-0.054088	-2.3939E-05	442.60108458466715	90.981	0.47098	90.981	90.779	91.25	0					30	14	3	0	0	0	0.89803	1	38021	38021		0.50596	0	1	671860	+		31149	8986	15423	15485	35940	35940					0.13462076185055594
SILKRHRPYR	10	Unmodified	_SILKRHRPYR_					0	0	0			REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.4017211794853	2	663.399287	1324.78402	2.5633	0.0017005	-1.3382	-0.00088774	1.2252	0.00081279	663.398856955421	90.87	0.3239	91.079	90.932	91.256	0.20904					13	9	2	0	0	0	0.89803	1	38084	38084		0.45834	0	1	473840	+		31150	8986	15423	15485	35941	35941					0.13462076185055594
SILKRHRPYR	10	Unmodified	_SILKRHRPYR_					0	0	0			REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	442.60195	1324.78402	1.8699	0.00082764	-1.924	-0.00085158	-0.054088	-2.3939E-05	442.60108458466715	90.981	0.47098	90.981	90.779	91.25	0	-0.15775	0.0001334	NaN	0.50596	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	671860	+		31151	8986	15423	15485							0.13462076185055594
SILKRHRPYR	10	Unmodified	_SILKRHRPYR_					0	0	0			REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	442.60195	1324.78402	4.7795	0.0021154	-2.3189	-0.0010263	2.4606	0.0010891	442.6007360367173	90.202	0.3822	91.222	90.99	91.372	1.0199	0.083111	-0.00039089	NaN	0.50596	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	417440	+		31152	8986	15423	15485							0.13462076185055594
SILKRHRPYR	10	Unmodified	_SILKRHRPYR_					0	0	0			REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	REV__FOXRED2|p.I533Yfs*5|1|0.12|ENSG00000100350|chr22:36495994-36495995|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	442.60195	1324.78402	4.393	0.0019444	-2.2224	-0.00098364	2.1706	0.00096073	442.6008621960287	89.868	0.40765	91.273	91.081	91.489	1.4045	0.13412	-0.00026277	NaN	0.50596	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	388980	+		31153	8986	15423	15485							0.13462076185055594
SILNHSLDL	9	Unmodified	_SILNHSLDL_					0	0	0			REV__ENSG00000129009|ENST00000249842|ISLR	REV__ENSG00000129009|ENST00000249842|ISLR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.2791320681572	2	506.277106	1010.53966	2.6028	0.0013177	0.30494	0.00015439	2.9077	0.0014721	506.2775114177623	40.682	0.46984	42.008	41.74	42.21	1.3254					48	14	4	0	0	0	0.063746	1	17026	17026		62.573	2.4988	1	15687000	+		31154	9743	15424	15486	35942	35942					0.034811525806162535
SILSNIHEV	9	Unmodified	_SILSNIHEV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2772399783134	2	506.277106	1010.53966	2.014	0.0010196	0.31496	0.00015946	2.329	0.0011791	506.2775395390222	40.273	0.46536	42.135	41.862	42.327	1.8624					38	14	3	0	0	0	0.053939	2	16872	16834;16872		66.457	8.7347	1	10051000			31155	3812	15425	15487	35943;35944	35944					0.034811525806162535
SILSQKAG	8	Unmodified	_SILSQKAG_					0	0	0			REV__ENST00000246174.6_2_X:101854167-101854461:+|nuORF	REV__ENST00000246174.6_2_X:101854167-101854461:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1801940798759	2	402.23471	802.454868	-0.50499	-0.00020312	0.062157	2.5002E-05	-0.44283	-0.00017812	402.2346680030382	13.204	0.12627	13.931	13.851	13.977	0.72639					6	3	2	0	0	0	2.3239	1	5470	5470		2.3027	0	1	434740	+		31156	12138	15426	15488	35945	35945					0.04573826834666761
SILSSLTSV	9	Unmodified	_SILSSLTSV_					0	0	0		nc|ENSG00000163125|Q5VT52-5|RPRD2;nc|ENSG00000163125|Q5VT52-2|RPRD2;nc|ENSG00000163125|Q5VT52-3|RPRD2;ENSG00000163125|ENST00000369068|RPRD2;ENST00000492220.1_1_1:150381497-150445807:+|nuORF	nc|ENSG00000163125|Q5VT52-5|RPRD2	nc|ENSG00000163125|Q5VT52-5|RPRD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.5155517458916	1	906.514239	905.506963	1.538	0.0013943	-0.90002	-0.00081588	0.63802	0.00057837	906.5143991934772	71.177	0.25414	71.177	71.067	71.321	0					12	7	2	0	0	0	0.076627	1	29629	29629		57.471	9.1255	1	701430			31157	3665	15427	15489	35946	35946					0.0504294545777384
SILTKHKIIRT	11	Unmodified	_SILTKHKIIRT_					0	0	0		nc|ENSG00000197008|P52744|ZNF138;nc|ENSG00000197008|P52744-2|ZNF138;ENSG00000197008|ENST00000307355|ZNF138	nc|ENSG00000197008|P52744|ZNF138	nc|ENSG00000197008|P52744|ZNF138	MSMS	GG20161007_CRH_Patient100_A02_02	2	655.4205200076103	2	655.419354	1308.82415	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.771	1	99.844	99.344	100.34	0.072716								0	0	0	0.63775	1	41776	41776		1.3295	0	1				31158	4975	15428	15490	35947	35947					0.1820957806496608
SILVLWML	8	Unmodified	_SILVLWML_					0	0	0		nc|ENSG00000186567|Q7Z692-2|CEACAM19;ENSG00000186567|ENST00000358777|CEACAM19;nc|ENSG00000186567|Q7Z692|CEACAM19	nc|ENSG00000186567|Q7Z692-2|CEACAM19	nc|ENSG00000186567|Q7Z692-2|CEACAM19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7935974001884	2	487.790807	973.56706	2.4555	0.0011978	1.6718	0.0008155	4.1273	0.0020133	487.79151835946806	63.141	1.2421	65.086	64.167	65.409	1.9444					57	39	2	0	0	0	0.87803	1	26490	26490		10.183	0.83596	1	1461900			31159	4797	15429	15491	35948	35948					0.07921964587285402
SILVSWKV	8	Unmodified	_SILVSWKV_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	466.7163574099541	2	466.284203	930.553853	1.9276	0.00089881	0.22893	0.00010675	2.1565	0.0010056	466.2844896633628	42.652	0.59856	43.992	43.732	44.331	1.3399					33	18	2	0	0	0	2.3239	1	17773	17773		2.5775	0	1	1791600			31160	4389	15430	15492	35949	35949					0.08579849799571093
SILYTKIVF	9	Unmodified	_SILYTKIVF_					0	0	0			REV__tr|A0A7D6VT29|A0A7D6VT29_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19015PE=4SV=1	REV__tr|A0A7D6VT29|A0A7D6VT29_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19015PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.7537719607353	2	542.326068	1082.63758	2.4906	0.0013507	-0.47574	-0.000258	2.0148	0.0010927	542.324820545361	59.491	0.31512	60.91	60.738	61.053	1.4196					15	9	2	0	0	0	0.11275	1	24951	24951		10.074	0	1	855140	+		31161	15471	15431	15493	35950	35950					0.09956961176612822
SILYTKIVF	9	Unmodified	_SILYTKIVF_					0	0	0			REV__tr|A0A7D6VT29|A0A7D6VT29_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19015PE=4SV=1	REV__tr|A0A7D6VT29|A0A7D6VT29_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19015PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	541.7538940310478	2	542.326068	1082.63758	2.4643	0.0013364	0.84262	0.00045698	3.3069	0.0017934	542.325816225513	58.987	0.25309	60.956	60.784	61.037	1.969					12	7	2	0	0	0	0.11275	1	24744	24744		10.074	0	1	339450	+		31162	15471	15431	15493	35951	35951					0.09956961176612822
SILYYLLDF	9	Unmodified	_SILYYLLDF_					0	0	0			REV__tr|A0A553SFY0|A0A553SFY0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09735PE=4SV=1	REV__tr|A0A553SFY0|A0A553SFY0_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_09735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8072997927666	2	573.807708	1145.60086	2.5418	0.0014585	-2.1362	-0.0012258	0.40558	0.00023272	573.8060155302995	76.94	0.34814	78.234	78.106	78.455	1.2938					16	10	2	0	0	0	0.5697	1	32301	32301		12.532	1.7076	1	529840	+		31163	14726	15432	15494	35952	35952					0.03388664560043253
SIMDYVVFV	9	Unmodified	_SIMDYVVFV_					0	0	0		ENSG00000138074|ENST00000310574|SLC5A6;SLC5A6|p.A114Sfs*31|1|0.19|ENSG00000138074|chr2:27207302-27207311|AGATGTGTGC/-|frameshift_variant;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	ENSG00000138074|ENST00000310574|SLC5A6	ENSG00000138074|ENST00000310574|SLC5A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1072.542773425579	1	1072.53835	1071.53107	3.848	0.0041271	-1.1848	-0.0012707	2.6632	0.0028564	1072.5352480154027	91.205	0.37467	92.571	92.342	92.717	1.366					15	11	2	0	0	0	0.076627	2	38391	38391;38444		57.471	16.809	1	1994600			31164	2810	15433	15495	35953;35954	35953					-0.0018353738021232857
SIMDYVVFV	9	Unmodified	_SIMDYVVFV_					0	0	0		ENSG00000138074|ENST00000310574|SLC5A6;SLC5A6|p.A114Sfs*31|1|0.19|ENSG00000138074|chr2:27207302-27207311|AGATGTGTGC/-|frameshift_variant;ENST00000488743.6_1_2:27425876-27434347:-|nuORF	ENSG00000138074|ENST00000310574|SLC5A6	ENSG00000138074|ENST00000310574|SLC5A6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1072.53835	1071.53107	2.065	0.0022147	-2.0417	-0.0021898	0.023273	2.4961E-05	1072.534720394609	92.728	0.36092	92.728	92.53	92.891	0	0.078714	-0.00045055	NaN	57.471	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	990730			31165	2810	15433	15495							-0.0018353738021232857
SIMIVRHL	8	Unmodified	_SIMIVRHL_					0	0	0		ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	323.5283996462822	3	323.528512	967.563706	0.2481	8.0267E-05	-0.16981	-5.494E-05	0.078286	2.5328E-05	323.52861015681833	25.867	0.73354	26.119	25.552	26.285	0.25197					59	23	5	0	0	0	0.88663	1	10780	10780		3.2813	0	1	129180000			31166	5855	15434	15496	35955	35955					0.07862714533291637
SIMIVRHL	8	Unmodified	_SIMIVRHL_					0	0	0		ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	ENST00000322348.5_1_5:74325336-74325411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	323.5279113650322	3	323.528512	967.563706	-0.03441	-1.1133E-05	-0.063503	-2.0545E-05	-0.097913	-3.1678E-05	323.5285377792715	24.268	0.4262	25.953	25.692	26.118	1.6845					51	13	6	0	0	0	0.88663	1	10099	10099		6.2058	0	1	94859000			31167	5855	15434	15496	35956	35956					0.07862714533291637
SIMLHELIKLL	11	Unmodified	_SIMLHELIKLL_					0	0	0		ENSG00000183696|ENST00000395564|UPP1;ENSG00000007001|ENST00000005756|UPP2;nc|ENSG00000007001|O95045-2|UPP2	ENSG00000183696|ENST00000395564|UPP1	ENSG00000183696|ENST00000395564|UPP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2025329470634	4	328.203259	1308.78393	-0.66977	-0.00021982	-1.8983	-0.00062303	-2.5681	-0.00084285	328.202537874215	37.279	0.88723	38.563	38.131	39.019	1.284					129	62	4	0	0	0	1.0191	1	15692	15692		2.6312	0	1	30589000			31168	514	15435	15497	35957	35957					0.14188895350184794
SIMLLLSIML	10	Unmodified	_SIMLLLSIML_					0	0	0		ENST00000496007.5_1_1:1326972-1327053:-|nuORF	ENST00000496007.5_1_1:1326972-1327053:-|nuORF	ENST00000496007.5_1_1:1326972-1327053:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3416625857353	2	567.337264	1132.65997	2.6318	0.0014931	1.147	0.00065076	3.7788	0.0021439	567.3359039839885	69.677	1.0098	71.53	71.324	72.334	1.853					42	31	3	0	0	0	0.44465	1	29254	29254		30.637	2.1497	1	3124700			31169	6950	15436	15498	35958	35958					0.09895101258371142
SIMSSRFN	8	Unmodified	_SIMSSRFN_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|105|1|anti-sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|105|1|anti-sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|105|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.2312194705009	2	471.229102	940.443651	3.8103	0.0017955	-0.071979	-3.3919E-05	3.7383	0.0017616	471.2292961874933	81.746	0.40211	82.98	82.78	83.182	1.2332					46	12	6	0	0	0	0.88261	1	34349	34349		2.5775	0	1	3418300			31170	7700	15437	15499	35959	35959					-0.02895318531113844
SIMYRRFL	8	Unmodified	_SIMYRRFL_					0	0	0		ENSG00000138080|ENST00000380320|EMILIN1	ENSG00000138080|ENST00000380320|EMILIN1	ENSG00000138080|ENST00000380320|EMILIN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3014404177666	2	543.299862	1084.58517	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.983	1	76.765	76.265	77.265	1.7817								0	0	0	1.0178	1	31453	31453		2.8892	0	1				31171	2813	15438	15500	35960	35960					0.046260995620059475
SINCNDHML	9	Unmodified	_SINCNDHML_					0	0	0			REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.7237426638603	2	523.723326	1045.4321	1.9814	0.0010377	0.25974	0.00013603	2.2411	0.0011737	523.722615454477	78.126	0.37779	78.126	77.905	78.283	0					18	11	2	0	0	0	0.66839	1	32516	32516		8.5933	2.2392	1	792550	+		31172	15867	15439	15501	35961	35961					-0.08879883616782536
SINCNDHML	9	Unmodified	_SINCNDHML_					0	0	0			REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7250854372978	2	523.723326	1045.4321	2.6709	0.0013988	-0.88663	-0.00046435	1.7843	0.00093448	523.7226474508508	76.708	0.37428	78.001	77.825	78.199	1.2938					28	11	3	0	0	0	0.66839	1	32251	32251		8.5933	2.2392	1	1795400	+		31173	15867	15439	15501	35962	35962					-0.08879883616782536
SINCNDHML	9	Unmodified	_SINCNDHML_					0	0	0			REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	REV__tr|A0A7D7A3S9|A0A7D7A3S9_9CLOTPrecorrin-3BC(17)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=cobJPE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.2735473513603	2	523.723326	1045.4321	2.6709	0.0013988	-0.88663	-0.00046435	1.7843	0.00093448	523.7226474508508	76.708	0.37428	78.001	77.825	78.199	1.2938					28	11	3	0	0	0	0.10844	1	32128	32128		16.942	7.5949	1	1795400	+		31174	15867	15439	15501	35963	35963					-0.08879883616782536
SINCYHHSI	9	Unmodified	_SINCYHHSI_					0	0	0			REV__nc|ENSG00000027697|P15260-2|IFNGR1	REV__nc|ENSG00000027697|P15260-2|IFNGR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2465087771416	2	537.245283	1072.47601	3.4127	0.0018335	0.74152	0.00039838	4.1543	0.0022319	537.2456054279437	74.555	0.41929	75.861	75.639	76.059	1.3063					44	13	5	0	0	0	0.59203	1	31348	31348		11.64	1.5664	1	15477000	+		31175	8571	15440	15502	35964	35964					-0.05732531128114715
SINCYHHSI	9	Unmodified	_SINCYHHSI_					0	0	0			REV__nc|ENSG00000027697|P15260-2|IFNGR1	REV__nc|ENSG00000027697|P15260-2|IFNGR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	537.245283	1072.47601	3.4127	0.0018335	0.74152	0.00039838	4.1543	0.0022319	537.2456054279437	74.555	0.41929	75.861	75.639	76.059	1.3063	-0.070411	-1.6399E-05	NaN	11.64	44	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15477000	+		31176	8571	15440	15502							-0.05732531128114715
SINCYHHSI	9	Unmodified	_SINCYHHSI_					0	0	0			REV__nc|ENSG00000027697|P15260-2|IFNGR1	REV__nc|ENSG00000027697|P15260-2|IFNGR1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.245283	1072.47601	3.1526	0.0016937	1.4272	0.00076674	4.5798	0.0024605	537.2455762069578	74.1	0.45641	75.896	75.657	76.114	1.7962	-0.035146	0.00072033	NaN	11.64	45	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8706200	+		31177	8571	15440	15502							-0.05732531128114715
SINFAKVLH	9	Unmodified	_SINFAKVLH_					0	0	0		ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-3|HSD17B4;ENSG00000133835|ENST00000510025|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5349609255791	3	343.534431	1027.58147	0.44265	0.00015206	1.3611	0.00046757	1.8037	0.00061963	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.77876	1	10690	10690		4.1895	0	1	4123700			31178	2584	15441	15503	35965	35965					0.06877753059779934
SINFAKVLH	9	Unmodified	_SINFAKVLH_					0	0	0		ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-3|HSD17B4;ENSG00000133835|ENST00000510025|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.5350219607353	3	343.534431	1027.58147	0.13798	4.7402E-05	1.7437	0.00059903	1.8817	0.00064643	343.53491883473754	24.267	0.79776	25.508	25.114	25.912	1.241					68	25	4	0	0	0	0.77876	1	10175	10175		4.1895	0	1	4511600			31179	2584	15441	15503	35966	35966					0.06877753059779934
SINFAKVLH	9	Unmodified	_SINFAKVLH_					0	0	0		ENST00000515235.6_1_5:118829562-118961685:+|nuORF;nc|ENSG00000133835|P51659-3|HSD17B4;ENSG00000133835|ENST00000510025|HSD17B4;nc|ENSG00000133835|P51659-2|HSD17B4	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	ENST00000515235.6_1_5:118829562-118961685:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5347473025322	3	343.534431	1027.58147	0.096532	3.3162E-05	1.1124	0.00038213	1.2089	0.0004153	343.5345872722628	24.026	0.87844	25.711	25.149	26.028	1.6845					54	24	4	0	0	0	0.77876	1	10009	10009		4.1895	0	1	3909700			31180	2584	15441	15503	35967	35967					0.06877753059779934
SINLPVIRI	9	Unmodified	_SINLPVIRI_					0	0	0			REV__tr|A0A7D7A660|A0A7D7A660_9CLOTtRNA(guanine-N(7)-)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmBPE=3SV=1	REV__tr|A0A7D7A660|A0A7D7A660_9CLOTtRNA(guanine-N(7)-)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=trmBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.8279907107353	2	512.829309	1023.64407	2.2681	0.0011631	-1.6018	-0.00082148	0.66623	0.00034166	512.8280492197422	81.797	0.30692	82.077	81.906	82.213	0.2802					21	9	3	0	0	0	0.49082	1	34208	34208		15.847	3.6065	1	2637600	+		31181	15889	15442	15504	35968	35968					0.13318899127989425
SIPCFPVIFV	10	Unmodified	_SIPCFPVIFV_					0	0	0		ENST00000368576.7_1_6:116988324-116989847:-|nuORF	ENST00000368576.7_1_6:116988324-116989847:-|nuORF	ENST00000368576.7_1_6:116988324-116989847:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.8053466677666	2	561.306821	1120.59909	1.4726	0.00082659	-2.409	-0.0013522	-0.93634	-0.00052557	561.3054209810666	54.207	0.34778	54.207	53.998	54.346	0					23	10	3	0	0	0	0.81324	1	22547	22547		10.824	1.4408	1	849520			31182	6086	15443	15505	35969	35969					0.043613322704231905
SIPCFPVIFV	10	Unmodified	_SIPCFPVIFV_					0	0	0		ENST00000368576.7_1_6:116988324-116989847:-|nuORF	ENST00000368576.7_1_6:116988324-116989847:-|nuORF	ENST00000368576.7_1_6:116988324-116989847:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.3074218630791	2	561.306821	1120.59909	1.7582	0.00098687	-2.5813	-0.0014489	-0.82316	-0.00046205	561.3051693091408	53.54	0.3448	53.863	53.694	54.039	0.32283					19	10	3	0	0	0	0.81324	1	22466	22466		10.824	1.4408	1	1255200			31183	6086	15443	15505	35970	35970					0.043613322704231905
SIPRKLKVFV	10	Unmodified	_SIPRKLKVFV_					0	0	0			REV__tr|A0A7D7A4G8|A0A7D7A4G8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01670PE=4SV=1	REV__tr|A0A7D7A4G8|A0A7D7A4G8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_01670PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2592956423759	3	396.260531	1185.75976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.521	1	92.689	92.189	93.189	0.16835								0	0	0	0.66254	1	38745	38745		0.15932	0.01943	1		+		31184	15872	15444	15506	35971	35971					0.1743142297882514
SIPVFPSTF	9	Unmodified	_SIPVFPSTF_					0	0	0			REV__ENST00000587533.1_1_19:14208485-14208734:-|nuORF	REV__ENST00000587533.1_1_19:14208485-14208734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7647888064384	2	497.765843	993.517133	2.3799	0.0011847	-1.4474	-0.00072049	0.93251	0.00046417	497.76549752495356	45.149	0.19458	46.514	46.433	46.628	1.3653					9	5	2	0	0	0	0.59203	1	18929	18929		11.64	1.4569	1	469120	+		31185	14037	15445	15507	35972	35972					0.020115531829901556
SIQAYYYF	8	Unmodified	_SIQAYYYF_					0	0	0			REV__tr|A0A553SIJ8|A0A553SIJ8_NIACIDUF600familyproteinOS=NialliacirculansOX=1397GN=CEQ21_14935PE=4SV=1	REV__tr|A0A553SIJ8|A0A553SIJ8_NIACIDUF600familyproteinOS=NialliacirculansOX=1397GN=CEQ21_14935PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7490112185478	2	527.74765	1053.48075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.437	1	67.759	67.259	68.259	0.32269								0	0	0	1.0178	1	28234	28234		0.79363	0	1		+		31186	14852	15446	15508	35973	35973					-0.043853237137454926
SIQGFDFFLI	10	Unmodified	_SIQGFDFFLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.8127319216728	2	593.810782	1185.60701	1.9448	0.0011548	0.15352	9.1161E-05	2.0983	0.001246	593.8105636120034	67.536	1.04	68.913	68.575	69.615	1.3778					82	33	3	0	0	0	0.10797	4	28360	28260;28305;28360;28454		62.573	18.714	1	3018700			31187	7764	15447	15509	35974;35975;35976;35977	35976					0.02163182791559848
SIQGFDFFLI	10	Unmodified	_SIQGFDFFLI_					0	0	0		L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|82|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.8128539919853	2	593.810782	1185.60701	1.3755	0.00081678	0.44604	0.00026486	1.8215	0.0010816	593.8106594351547	67.019	0.95095	68.908	68.587	69.538	1.8889					72	30	3	0	0	0	0.16044	3	28153	28047;28153;28244		53.833	13.883	1	2989000			31188	7764	15447	15509	35978;35979;35980	35979					0.02163182791559848
SIQIDWFSL	9	Unmodified	_SIQIDWFSL_					0	0	0			REV__tr|A0A553SIG7|A0A553SIG7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14825PE=4SV=1	REV__tr|A0A553SIG7|A0A553SIG7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_14825PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7891723513603	2	554.787307	1107.56006	1.6103	0.00089336	-0.68101	-0.00037782	0.92927	0.00051555	554.7869916177232	79.445	0.24677	81.161	80.982	81.229	1.7167					11	7	2	0	0	0	0.59203	1	33315	33315		11.64	0	1	618790	+		31189	14849	15448	15510	35981	35981					0.010583232404314913
SIQKEHYRQGK	11	Unmodified	_SIQKEHYRQGK_					0	0	0			REV__nc|ENSG00000006715|P49754-2|VPS41	REV__nc|ENSG00000006715|P49754-2|VPS41	MSMS	GG20161007_CRH_Patient100_W632_01	3	687.3701660037041	2	687.36785	1372.72115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.52	1	97.805	97.305	98.305	0.28442								0	0	0	0.63769	1	41038	41038		13.615	2.1202	1		+		31190	8511	15449	15511	35982	35982					0.049694656063593357
SIQNRNRPNTC	11	Unmodified	_SIQNRNRPNTC_					0	0	0			REV__ENSG00000185924|ENST00000331238|RTN4RL1	REV__ENSG00000185924|ENST00000331238|RTN4RL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8830444216728	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.406	1	25.658	25.158	26.158	0.25197								0	0	0	0.63775	1	10607	10607		0.40827	0.13925	1		+		31191	11480	15450	15512	35983	35983					-0.012882108563189831
SIQQSIERLLV	11	Unmodified	_SIQQSIERLLV_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	643.3801147341728	2	643.377352	1284.74015	2.0237	0.001302	0.17653	0.00011358	2.2003	0.0014156	643.376368533053	72.986	0.21838	72.986	72.84	73.059	0					9	6	2	0	0	0	0.18339	1	30383	30383		41.347	15.326	1	343840			31192	1245	15451	15513	35984	35984					0.10917002177438917
SIQQSIERLLV	11	Unmodified	_SIQQSIERLLV_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	643.377352	1284.74015	1.8555	0.0011938	-2.1979	-0.0014141	-0.34239	-0.00022028	643.3757832726384	72.474	0.18619	72.799	72.643	72.829	0.32494	0.084225	-0.0023679	NaN	41.347	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436090			31193	1245	15451	15513							0.10917002177438917
SIQQSIERLLV	11	Unmodified	_SIQQSIERLLV_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	643.377352	1284.74015	1.9773	0.0012722	-0.48264	-0.00031052	1.4947	0.00096164	643.3775577511395	71.203	0.2659	72.545	72.392	72.658	1.3415	-0.16997	-0.00016076	NaN	41.347	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1272100			31194	1245	15451	15513							0.10917002177438917
SIQQSIERLLV	11	Unmodified	_SIQQSIERLLV_					0	0	0		ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	ENSG00000100138|ENST00000401959|SNU13	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	643.377352	1284.74015	0.8694	0.00055935	1.0211	0.00065697	1.8905	0.0012163	643.3774454961617	70.692	0.26954	72.529	72.411	72.681	1.8378	-0.18528	0.0017742	NaN	41.347	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1295200			31195	1245	15451	15513							0.10917002177438917
SIQRLWYFWFL	11	Unmodified	_SIQRLWYFWFL_					0	0	0		nc|ENSG00000154978|Q96AW1-4|VOPP1;nc|ENSG00000154978|Q96AW1-2|VOPP1;nc|ENSG00000154978|Q96AW1-3|VOPP1;ENSG00000154978|ENST00000285279|VOPP1	nc|ENSG00000154978|Q96AW1-4|VOPP1	nc|ENSG00000154978|Q96AW1-4|VOPP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1558.841357409954	1	1558.82053	1557.81326	1.6441	0.0025629	-0.16964	-0.00026444	1.4745	0.0022985	1558.8196769047104	35.986	0.062897	35.986	35.935	35.998	0					5	4	2	0	0	0	1.039	1	15078	15078		1.3295	0	1	19516000			31196	3404	15452	15514	35985	35985					0.05666175690680575
SIQRRYRK	8	Unmodified	_SIQRRYRK_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8282348513603	2	553.830706	1105.64686	1.1393	0.00063097	-1.5458	-0.00085609	-0.40649	-0.00022513	553.8296328426109	70.359	1.9249	70.359	69.047	70.972	0					100	61	3	0	0	0	0.89181	1	29342	29342		0.6015	0	1	1989600			31197	803	15453	15515	35986	35986					0.09826167305504896
SIQRRYRK	8	Unmodified	_SIQRRYRK_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8314697146416	2	553.830706	1105.64686	1.2785	0.00070807	-0.43451	-0.00024064	0.84399	0.00046743	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.89181	1	30088	30088		0.6015	0	1	6275300			31198	803	15453	15515	35987	35987					0.09826167305504896
SIQSSRYK	8	Unmodified	_SIQSSRYK_					0	0	0		ENST00000527664.1_1_8:110592124-110692982:-|nuORF;ENST00000531284.1_1_8:110631065-110656945:-|nuORF;nc|ENSG00000147642|Q9NX95-5|SYBU;nc|ENSG00000147642|Q9NX95-2|SYBU;nc|ENSG00000147642|Q9NX95-4|SYBU;nc|ENSG00000147642|Q9NX95-3|SYBU;ENSG00000147642|ENST00000276646|SYBU	ENST00000527664.1_1_8:110592124-110692982:-|nuORF	ENST00000527664.1_1_8:110592124-110692982:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	323.5084106326103	3	323.510174	967.508694	-3.3176	-0.0010733	-0.83338	-0.00026961	-4.151	-0.0013429	323.50988551281057	13.622	0.43115	13.622	13.331	13.762	0					27	13	3	0	0	0	0.88508	1	5684	5684		5.7319	0	1	1921700			31199	3188	15454	15516	35988	35988					0.02363999266378869
SIRDDATK	8	Unmodified	_SIRDDATK_					0	0	0			REV__tr|A0A7D6ZW63|A0A7D6ZW63_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17760PE=3SV=1	REV__tr|A0A7D6ZW63|A0A7D6ZW63_9CLOTFAD-bindingoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17760PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	452.5680724978447	2	453.237981	904.461409	0.22504	0.000102	-0.29666	-0.00013446	-0.07162	-3.2461E-05	453.23801238092534	14.039	0.18121	14.809	14.67	14.851	0.76937					6	5	2	0	0	0	2.3239	1	5804	5804		4.3292	0	1	372700	+		31200	15742	15455	15517	35989	35989					0.005357199953664349
SIRKKRFV	8	Unmodified	_SIRKKRFV_					0	0	0		ENSG00000154734|ENST00000284984|ADAMTS1;ADAMTS1|p.E585Nfs*94|1|0.16|ENSG00000154734|chr21:26839974-26839974|C/-|frameshift_variant;ADAMTS1|p.V753Efs*8|1|0.15|ENSG00000154734|chr21:26838225-26838226|-/GAGGGCTAAAGCTGCGAATT|frameshift_variant;ADAMTS1|p.Q755Efs*21|1|0.18|ENSG00000154734|chr21:26838224-26838225|-/TTTG|frameshift_variant	ENSG00000154734|ENST00000284984|ADAMTS1	ENSG00000154734|ENST00000284984|ADAMTS1	MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3371459841728	2	517.335093	1032.65563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	104.03	103.53	104.53	0.16055								0	0	0	1.0178	1	43891	43891		0.79363	0	1				31201	3395	15456	15518	35990	35990					0.1406114094197619
SIRNARKFV	9	Unmodified	_SIRNARKFV_					0	0	0		ENST00000608684.1_1_1:78470094-78470214:-|nuORF	ENST00000608684.1_1_1:78470094-78470214:-|nuORF	ENST00000608684.1_1_1:78470094-78470214:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.3317138552666	2	545.827632	1089.64071	1.8994	0.0010367	-3.6229	-0.0019775	-1.7235	-0.00094073	545.8249584046987	46.669	0.17645	48.64	48.503	48.679	1.9703					6	5	2	0	0	0	0.11463	1	19540	19540		12.532	1.7076	1	354130			31202	7571	15457	15519	35991	35991					0.09947649073978937
SIRQELYR	8	Unmodified	_SIRQELYR_					0	0	0			REV__ENST00000531785.1_1_11:76092857-76106035:+|nuORF	REV__ENST00000531785.1_1_11:76092857-76106035:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1917602419853	2	532.795998	1063.57744	2.1465	0.0011437	1.8193	0.00096931	3.9658	0.002113	532.7979196795851	91.443	0.18806	91.443	91.281	91.469	0					6	5	2	0	0	0	2.3239	1	38206	38206		0.52476	0.52476	1	199130	+		31203	11271	15458	15520	35992	35992					0.048196635660815446
SIRQMFLL	8	Unmodified	_SIRQMFLL_					0	0	0		nc|ENSG998|Q9N2K0|HERV-H-ENH1	nc|ENSG998|Q9N2K0|HERV-H-ENH1	nc|ENSG998|Q9N2K0|HERV-H-ENH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.2050353884697	2	504.288963	1006.56337	3.6816	0.0018566	-1.4558	-0.00073415	2.2258	0.0011224	504.28851609202746	72.926	0.12302	74.256	74.195	74.319	1.3298					5	3	2	0	0	0	2.3239	1	30606	30606		9.3474	4.5914	1	393730			31204	8030	15459	15521	35993	35993					0.0603529481344367
SIRRHKRKRL	10	Unmodified	_SIRRHKRKRL_					0	0	0			REV__ENST00000526785.5_1_11:33790513-33792290:-|nuORF	REV__ENST00000526785.5_1_11:33790513-33792290:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	675.4374267458916	2	675.439278	1348.864	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.28	109.78	110.78	0.16133								0	0	0	0.6624	1	47838	47838		0.40072	0.050084	1		+		31205	13672	15460	15522	35994	35994					0.20352562578909783
SIRRRRGW	8	Unmodified	_SIRRRRGW_					0	0	0			REV__ENST00000272298.11_1_2:47397893-47403686:-|nuORF	REV__ENST00000272298.11_1_2:47397893-47403686:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2533447146416	3	362.884569	1085.63188	1.2684	0.0004603	2.7654	0.0010035	4.0338	0.0014638	362.88602637622444	69.654	0.18787	71.019	70.908	71.096	1.3657					8	5	2	0	0	0	2.3239	1	29211	29211		0.40072	0	1	273830	+		31206	12238	15461	15523	35995	35995					0.09248720228174534
SIRSYYYSWWF	11	Unmodified	_SIRSYYYSWWF_					0	0	0			REV__tr|A0A553SI08|A0A553SI08_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13860PE=3SV=1	REV__tr|A0A553SI08|A0A553SI08_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13860PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	779.3609496951103	2	779.361702	1556.70885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.55	1	102.73	102.23	103.23	0.18066								0	0	0	0.63775	1	43144	43144		1.3295	0	1		+		31207	14829	15462	15524	35996	35996					-0.0472357085668591
SISAIIPRV	9	Unmodified	_SISAIIPRV_					0	0	0			REV__nc|ENSG00000117222|Q15291-2|RBBP5	REV__nc|ENSG00000117222|Q15291-2|RBBP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3001891970634	2	478.300384	954.586216	0.82312	0.0003937	0.67524	0.00032297	1.4984	0.00071667	478.3003764344133	53.217	0.15944	54.618	54.506	54.665	1.4005					7	4	2	0	0	0	0.11643	1	22279	22279		43.858	5.6827	1	2413100	+		31208	9495	15463	15525	35997	35997					0.10710637202555517
SISAIIPRV	9	Unmodified	_SISAIIPRV_					0	0	0			REV__nc|ENSG00000117222|Q15291-2|RBBP5	REV__nc|ENSG00000117222|Q15291-2|RBBP5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	478.300384	954.586216	0.82312	0.0003937	0.67524	0.00032297	1.4984	0.00071667	478.3003764344133	53.217	0.15944	54.618	54.506	54.665	1.4005	0.013156	0.00062526	NaN	43.858	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2413100	+		31209	9495	15463	15525							0.10710637202555517
SISAIIPRV	9	Unmodified	_SISAIIPRV_					0	0	0			REV__nc|ENSG00000117222|Q15291-2|RBBP5	REV__nc|ENSG00000117222|Q15291-2|RBBP5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	478.300384	954.586216	1.106	0.00052898	-0.13373	-6.3964E-05	0.97222	0.00046501	478.30029915944743	52.619	0.22588	54.591	54.48	54.705	1.9722	-0.013156	-0.0001486	NaN	43.858	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1470200	+		31210	9495	15463	15525							0.10710637202555517
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.2588378787041	2	466.258382	930.502212	2.2615	0.0010545	0.82341	0.00038392	3.085	0.0014384	466.2589152463572	57.706	0.31822	57.706	57.594	57.912	0					15	9	2	0	0	0	0.051699	2	24140	24084;24140		67.344	25.249	1	1439100			31211	3374	15464	15526	35998;35999	35999					0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	931.5143920779228	1	931.509488	930.502212	1.8334	0.0017078	1.4062	0.0013099	3.2395	0.0030177	931.5112900678927	57.747	0.25471	57.747	57.626	57.881	0					10	7	2	0	0	0	0.066815	1	24116	24116		61.357	15.337	1	602820			31212	3374	15464	15526	36000	36000					0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	466.2604247927666	2	466.258382	930.502212	3.0239	0.0014099	-0.42034	-0.00019599	2.6036	0.0012139	466.2581866944763	57.454	0.32922	57.777	57.62	57.949	0.32298					16	10	2	0	0	0	0.11478	2	24073	24073;24139		44.407	15.92	1	1405400			31213	3374	15464	15526	36001;36002	36001					0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	931.5155517458916	1	931.509488	930.502212	2.3836	0.0022204	1.5456	0.0014398	3.9293	0.0036601	931.5118189932879	57.503	0.30101	57.826	57.648	57.949	0.32298					13	9	2	0	0	0	0.029093	1	24098	24098		88.904	31.432	1	585450			31214	3374	15464	15526	36003	36003					0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	931.5096313357353	1	931.509488	930.502212	1.1737	0.0010933	0.39047	0.00036373	1.5642	0.001457	931.5096798464054	56.492	0.30971	57.906	57.753	58.063	1.4145					14	9	2	0	0	0	0.018723	1	23661	23661		100.37	32.291	1	1565000			31215	3374	15464	15526	36004	36004					0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	466.258382	930.502212	1.1208	0.00052259	0.90224	0.00042067	2.0231	0.00094327	466.25878938965974	56.456	0.34026	57.871	57.722	58.063	1.4145	0.0421	0.00048134	NaN	67.344	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1787600			31216	3374	15464	15526							0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	931.509488	930.502212	1.2777	0.0011902	1.0398	0.00096861	2.3175	0.0021588	931.5104726381187	55.993	0.2462	57.961	57.841	58.087	1.9684	0.10109	0.00015143	NaN	100.37	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1286100			31217	3374	15464	15526							0.034180613149942474
SISDVIAQV	9	Unmodified	_SISDVIAQV_					0	0	0		ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	ENSG00000154122|ENST00000284268|ANKH	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	466.258382	930.502212	1.3976	0.00065164	-0.023179	-1.0808E-05	1.3744	0.00064083	466.2587433381522	55.992	0.30624	57.961	57.811	58.117	1.9684	0.13213	-0.00038162	NaN	67.344	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1878200			31218	3374	15464	15526							0.034180613149942474
SISELVVIT	9	Unmodified	_SISELVVIT_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|119|1|anti-sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|119|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7846862673759	2	480.784233	959.553913	1.7781	0.00085487	-0.44242	-0.00021271	1.3356	0.00064216	480.7840489759702	71.709	0.59341	73.05	72.873	73.467	1.3415					50	18	4	0	0	0	0.026628	1	30137	30137		92.822	11.209	1	10659000	+		31219	14245	15465	15527	36005	36005					0.07251805008900192
SISELVVIT	9	Unmodified	_SISELVVIT_					0	0	0			REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|119|1|anti-sense	REV__L1M1_dup9344|chr21:15784590-15787473:+|1.5014492037212643|0.185927186723819|3.01|429.0|119|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7838012576103	2	480.784233	959.553913	1.5341	0.00073758	-1.1082	-0.00053283	0.42587	0.00020475	480.78372246073513	71.32	0.72379	73.144	72.91	73.634	1.824					49	22	3	0	0	0	0.031324	2	29878	29878;30008		85.357	6.8973	1	16267000	+		31220	14245	15465	15527	36006;36007	36006					0.07251805008900192
SISFRITVV	9	Unmodified	_SISFRITVV_					0	0	0			REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3070251345634	2	511.305667	1020.59678	2.0423	0.0010442	0.3207	0.00016398	2.363	0.0012082	511.30585872009107	53.912	0.31289	54.233	54.098	54.411	0.32088					20	9	3	0	0	0	0.32838	1	22577	22577		24.021	3.5669	1	1997100	+		31221	14845	15466	15528	36008	36008					0.08730619856999056
SISFRITVV	9	Unmodified	_SISFRITVV_					0	0	0			REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3082763552666	2	511.305667	1020.59678	1.2269	0.00062732	-2.7328	-0.0013973	-1.5059	-0.00076998	511.3059072052009	52.66	0.50652	54.057	53.836	54.342	1.3966					48	15	4	0	0	0	0.091139	1	22005	22005		52.268	0	1	8917900	+		31222	14845	15466	15528	36009	36009					0.08730619856999056
SISFRITVV	9	Unmodified	_SISFRITVV_					0	0	0			REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	REV__tr|A0A553SIC5|A0A553SIC5_NIACIDUF350domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14635PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3072082400322	2	511.305667	1020.59678	1.7753	0.00090774	-2.9836	-0.0015255	-1.2083	-0.00061779	511.3059982727866	52.037	0.48999	54.009	53.799	54.289	1.9722					45	15	4	0	0	0	0.12251	1	21783	21783		41.84	0	1	6514200	+		31223	14845	15466	15528	36010	36010					0.08730619856999056
SISGTVISLL	10	Unmodified	_SISGTVISLL_					0	0	0			REV__ENSG00000112462|ENST00000396806|OR12D3	REV__ENSG00000112462|ENST00000396806|OR12D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2985107302666	2	495.297507	988.580462	1.2982	0.000643	0.66712	0.00033042	1.9653	0.00097342	495.2977577244195	39.11	0.37548	39.11	38.921	39.297	0					28	11	3	0	0	0	0.27498	1	16428	16428		136.33	40.049	1	6959300	+		31224	9364	15467	15529	36011	36011					0.08571493900251426
SISGTVISLL	10	Unmodified	_SISGTVISLL_					0	0	0			REV__ENSG00000112462|ENST00000396806|OR12D3	REV__ENSG00000112462|ENST00000396806|OR12D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2980224490166	2	495.297507	988.580462	2.2276	0.0011033	-1.0437	-0.00051696	1.1839	0.00058638	495.2969798253297	38.486	0.3383	38.795	38.633	38.971	0.30857					37	15	3	0	0	0	0.066456	3	16165	16165;16213;16257		136.33	26.015	1	9219200	+		31225	9364	15467	15529	36012;36013;36014	36012					0.08571493900251426
SISGTVISLL	10	Unmodified	_SISGTVISLL_					0	0	0			REV__ENSG00000112462|ENST00000396806|OR12D3	REV__ENSG00000112462|ENST00000396806|OR12D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2969238162041	2	495.297507	988.580462	0.35649	0.00017657	-0.44747	-0.00022163	-0.090985	-4.5064E-05	495.297242015702	37.086	0.28141	38.37	38.242	38.523	1.284					50	23	3	0	0	0	0.27498	2	15537	15537;15575		136.33	32.914	1	19479000	+		31226	9364	15467	15529	36015;36016	36015					0.08571493900251426
SISGTVISLL	10	Unmodified	_SISGTVISLL_					0	0	0			REV__ENSG00000112462|ENST00000396806|OR12D3	REV__ENSG00000112462|ENST00000396806|OR12D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2978393435478	2	495.297507	988.580462	0.76843	0.0003806	-0.82888	-0.00041054	-0.060453	-2.9942E-05	495.29711918081983	36.433	0.30656	38.25	38.095	38.401	1.8176					52	24	3	0	0	0	0.27498	3	15249	15249;15293;15332		136.33	32.914	1	16637000	+		31227	9364	15467	15529	36017;36018;36019	36017					0.08571493900251426
SISGTVISLL	10	Unmodified	_SISGTVISLL_					0	0	0			REV__ENSG00000112462|ENST00000396806|OR12D3	REV__ENSG00000112462|ENST00000396806|OR12D3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	495.297507	988.580462	0.76843	0.0003806	-0.82888	-0.00041054	-0.060453	-2.9942E-05	495.29711918081983	36.433	0.30656	38.25	38.095	38.401	1.8176	-0.059888	-0.00018011	NaN	136.33	52	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16637000	+		31228	9364	15467	15529							0.08571493900251426
SISISKNS	8	Unmodified	_SISISKNS_					0	0	0			REV__ENSG00000185069|ENST00000332411|KRT76	REV__ENSG00000185069|ENST00000332411|KRT76	MSMS	GG20161007_CRH_Patient100_W632_01	3	418.2295104861259	2	418.229625	834.444697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.202	1	24.416	23.916	24.916	1.2145								0	0	0	1.0178	1	9698	9698		2.3027	0	1		+	+	31229	8384	15468	15530	36020	36020					0.020852191094263617
SISVHDDEE	9	Unmodified	_SISVHDDEE_					0	0	0		ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	ENSG00000143126|ENST00000271332|CELSR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.2907592654228	2	515.719818	1029.42508	1.7812	0.00091861	2.3569	0.0012155	4.1381	0.0021341	515.7206318714665	46.351	0.22264	48.321	48.156	48.379	1.9703					10	6	2	0	0	0	0.11518	1	19368	19368		7.2892	1.5288	1	310590			31230	3015	15469	15531	36021	36021					-0.08845201691997318
SITFHLSWWEM	11	Unmodified	_SITFHLSWWEM_					0	0	0		ENST00000572017.1_1_16:10958826-10982354:-|nuORF	ENST00000572017.1_1_16:10958826-10982354:-|nuORF	ENST00000572017.1_1_16:10958826-10982354:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.5634948611259	3	479.560429	1435.65946	2.5568	0.0012262	3.4621	0.0016603	6.019	0.0028865	479.5624189583528	47.522	0.41008	47.853	47.636	48.046	0.33034					37	13	4	0	0	0	1.0131	1	19952	19952		1.2148	0.20126	1	3714800			31231	7397	15470	15532	36022	36022					-0.04094602137115544
SITIQYMIASY	11	Unmodified	_SITIQYMIASY_					0	0	0		tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.3286010622978	2	645.325939	1288.63732	1.5028	0.00096983	1.7313	0.0011173	3.2342	0.0020871	645.3270745227496	42.311	0.3203	43.651	43.476	43.796	1.3399					24	9	3	0	0	0	0.91768	1	17717	17717		8.7454	0	1	2727300			31232	16255	15471	15533	36023	36023					0.004551733944708758
SITIQYMIASY	11	Unmodified	_SITIQYMIASY_					0	0	0		tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	tr|A0A553SJP0|A0A553SJP0_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_17325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.3289672732353	2	645.325939	1288.63732	1.6601	0.0010713	1.6381	0.0010571	3.2983	0.0021285	645.3266543528314	41.818	0.28778	43.711	43.541	43.829	1.8927					21	8	3	0	0	0	0.84637	1	17499	17499		13.042	0	1	2027400			31233	16255	15471	15533	36024	36024					0.004551733944708758
SITYFPID	8	Unmodified	_SITYFPID_					0	0	0		tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	319.1644164919853	3	319.163893	954.469849	1.3909	0.00044393	0.61059	0.00019488	2.0015	0.00063881	319.1640307330443	60.132	0.35836	61.552	61.39	61.748	1.4196					25	11	3	0	0	0	0.86113	1	25231	25231		15.847	1.0089	1	1843900			31234	16304	15472	15534	36025	36025					-0.009207260880089052
SITYFPID	8	Unmodified	_SITYFPID_					0	0	0		tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	319.163893	954.469849	-1.7422	-0.00055605	6.0618	0.0019347	4.3196	0.0013787	319.1647365848147	61.803	0.25237	61.803	61.677	61.929	0	0.13641	0.0054721	NaN	15.847	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251960			31235	16304	15472	15534							-0.009207260880089052
SITYFPID	8	Unmodified	_SITYFPID_					0	0	0		tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	tr|A0A553SKS0|A0A553SKS0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19265PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	319.163893	954.469849	2.2151	0.00070697	-0.33822	-0.00010795	1.8768	0.00059902	319.1635876248202	59.676	0.45298	61.645	61.405	61.857	1.969	-0.021544	-0.0006559	NaN	15.847	26	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1597000			31236	16304	15472	15534							-0.009207260880089052
SIVEIIIIH	9	Unmodified	_SIVEIIIIH_					0	0	0			REV__tr|A0A7D6VML7|A0A7D6VML7_9CLOTSpoOBalpha-helicaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15875PE=4SV=1	REV__tr|A0A7D6VML7|A0A7D6VML7_9CLOTSpoOBalpha-helicaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15875PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1400634646416	2	518.823692	1035.63283	2.3665	0.0012278	-0.18317	-9.5033E-05	2.1833	0.0011327	518.8231400691933	82.409	0.36818	82.689	82.489	82.857	0.2802					27	11	3	0	0	0	0.090248	1	34426	34426		8.5933	0	1	2643000	+		31237	15317	15473	15535	36026	36026					0.11644077033861322
SIVEYREY	8	Unmodified	_SIVEYREY_					0	0	0		ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	353.5110656619072	3	353.509952	1057.50803	2.0921	0.00073958	1.7257	0.00061005	3.8178	0.0013496	353.51011325643265	75.584	0.33854	75.906	75.742	76.081	0.32164					29	10	4	0	0	0	0.73597	1	31609	31609		21.537	4.0943	1	2398600			31238	2159	15474	15536	36027	36027					-0.018428401733444844
SIVEYREY	8	Unmodified	_SIVEYREY_					0	0	0		ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	353.5117370486259	3	353.509952	1057.50803	2.0142	0.00071204	3.3216	0.0011742	5.3358	0.0018863	353.51101140373567	74.584	0.4488	75.89	75.61	76.059	1.3063					35	14	3	0	0	0	0.80889	2	31260	31260;31308		16.149	3.2765	1	5758300			31239	2159	15474	15536	36028;36029	36028					-0.018428401733444844
SIVEYREY	8	Unmodified	_SIVEYREY_					0	0	0		ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	ENSG00000122547|ENST00000242108|EEPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	353.5112182497978	3	353.509952	1057.50803	2.5788	0.00091161	2.4433	0.00086373	5.0221	0.0017753	353.510661064753	74.081	0.39445	75.877	75.687	76.082	1.7962					30	12	3	0	0	0	0.73597	2	31062	31062;31112		21.537	4.0943	1	3062400			31240	2159	15474	15536	36030;36031	36030					-0.018428401733444844
SIVFELHTLFR	11	Unmodified	_SIVFELHTLFR_					0	0	0			REV__tr|A0A553SUR9|A0A553SUR9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05905PE=4SV=1	REV__tr|A0A553SUR9|A0A553SUR9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	681.3867065310478	2	681.382437	1360.75032	1.6808	0.0011452	3.2654	0.002225	4.9461	0.0033702	681.3854000987993	47.456	0.32622	47.786	47.574	47.9	0.33034					24	10	3	0	0	0	0.22376	1	19885	19885		38.176	5.3899	1	3670800	+		31241	15306	15475	15537	36032	36032					0.08437609902625809
SIVFELHTLFR	11	Unmodified	_SIVFELHTLFR_					0	0	0			REV__tr|A0A553SUR9|A0A553SUR9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05905PE=4SV=1	REV__tr|A0A553SUR9|A0A553SUR9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05905PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	681.382437	1360.75032	2.2188	0.0015119	4.6524	0.00317	6.8712	0.0046819	681.3855965263492	47.823	0.31295	47.823	47.653	47.966	0	0.018417	0.0009784	NaN	38.176	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3007700	+		31242	15306	15475	15537							0.08437609902625809
SIVLLRRRWRF	11	Unmodified	_SIVLLRRRWRF_					0	0	0			REV__ENSG00000091986|ENST00000206423|CCDC80	REV__ENSG00000091986|ENST00000206423|CCDC80	MSMS	GG20161007_CRH_Patient100_W632_02	4	751.4661743044853	2	751.464961	1500.91537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.29	1	102.48	101.98	102.98	0.19076								0	0	0	0.63775	1	43017	43017		1.3295	1.0225	1		+		31243	8910	15476	15538	36033	36033					0.18494886552957723
SIVSELKSK	9	Unmodified	_SIVSELKSK_					0	0	0			REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7962219119072	2	495.795132	989.575711	1.9443	0.00096397	0.52218	0.0002589	2.4665	0.0012229	495.79546978870263	67.801	0.51215	69.179	68.882	69.394	1.3778					49	16	4	0	0	0	0.24063	2	28476	28420;28476		28.487	6.7402	1	12937000	+		31244	8690	15477	15539	36034;36035	36035					0.08050609757481197
SIVSGVSKSV	10	Unmodified	_SIVSGVSKSV_					0	0	0			REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7810241580009	2	481.779482	961.544411	2.3639	0.0011389	0.5405	0.0002604	2.9044	0.0013993	481.7796914286848	61.409	0.3482	61.409	61.203	61.552	0					21	10	3	0	0	0	0.81324	1	25597	25597		10.824	0.75	1	2927100	+		31245	15586	15478	15540	36036	36036					0.06210036723382473
SIVSGVSKSV	10	Unmodified	_SIVSGVSKSV_					0	0	0			REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.7810851931572	2	481.779482	961.544411	2.9255	0.0014094	0.12118	5.8381E-05	3.0466	0.0014678	481.7794583770498	60.895	0.3783	61.223	61.011	61.389	0.32809					24	11	3	0	0	0	0.81324	1	25467	25467		10.824	0.75	1	4332300	+		31246	15586	15478	15540	36037	36037					0.06210036723382473
SIVSGVSKSV	10	Unmodified	_SIVSGVSKSV_					0	0	0			REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	REV__tr|A0A7D6W138|A0A7D6W138_9CLOTDUF1648domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7810546755791	2	481.779482	961.544411	2.5771	0.0012416	-0.11102	-5.3488E-05	2.466	0.0011881	481.77939262396785	59.772	0.40035	61.192	60.99	61.39	1.4196					37	12	4	0	0	0	0.81324	1	25016	25016		10.824	10.824	1	39208000	+		31247	15586	15478	15540	36038	36038					0.06210036723382473
SIVSKRENI	9	Unmodified	_SIVSKRENI_					0	0	0			REV__tr|A0A7D6W1C2|A0A7D6W1C2_9CLOTPutativebeta-lysineN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=ablBPE=4SV=1	REV__tr|A0A7D6W1C2|A0A7D6W1C2_9CLOTPutativebeta-lysineN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=ablBPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3058959841728	2	523.303655	1044.59276	2.175	0.0011382	-2.22	-0.0011618	-0.045047	-2.3573E-05	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.59203	1	29245	29245		11.64	0	1	5777900	+		31248	15589	15479	15541	36039	36039					0.07224530363282611
SIVVNCCFV	9	Unmodified	_SIVVNCCFV_					0	0	0		ENST00000367103.3_1_1:206907394-206907589:+|nuORF	ENST00000367103.3_1_1:206907394-206907589:+|nuORF	ENST00000367103.3_1_1:206907394-206907589:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.4953185915947	3	328.49448	982.461609	2.077	0.00068227	1.9564	0.00064267	4.0334	0.0013249	328.49469415000004	59.332	0.42337	61.301	61.099	61.522	1.969					17	13	2	0	0	0	0.64457	1	24901	24901		9.544	0.16085	1	1634400			31249	6058	15480	15542	36040	36040					-0.030323196006293074
SIVVNCCFV	9	Unmodified	_SIVVNCCFV_					0	0	0		ENST00000367103.3_1_1:206907394-206907589:+|nuORF	ENST00000367103.3_1_1:206907394-206907589:+|nuORF	ENST00000367103.3_1_1:206907394-206907589:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	328.49448	982.461609	1.2232	0.00040183	3.4711	0.0011403	4.6944	0.0015421	328.4954757934984	59.772	0.36969	61.192	61.02	61.39	1.4196	-0.054517	0.00042848	NaN	9.544	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2747300			31250	6058	15480	15542							-0.030323196006293074
SIWPLIRIY	9	Unmodified	_SIWPLIRIY_					0	0	0		nc|ENSG00000143324|Q9UBH6-2|XPR1;ENSG00000143324|ENST00000367590|XPR1;XPR1-LHX4|2|fusion	nc|ENSG00000143324|Q9UBH6-2|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8472167849541	2	580.844959	1159.67537	2.5586	0.0014862	1.7614	0.0010231	4.32	0.0025092	580.8467986138432	79.996	0.52925	81.247	81.078	81.608	1.2512					33	16	3	0	0	0	0.30098	2	33559	33559;33615		25.399	17.244	1	1496100			31251	3023	15481	15543	36041;36042	36041					0.10191472162091486
SIWPLIRIY	9	Unmodified	_SIWPLIRIY_					0	0	0		nc|ENSG00000143324|Q9UBH6-2|XPR1;ENSG00000143324|ENST00000367590|XPR1;XPR1-LHX4|2|fusion	nc|ENSG00000143324|Q9UBH6-2|XPR1	nc|ENSG00000143324|Q9UBH6-2|XPR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8484985232353	2	580.844959	1159.67537	1.5947	0.00092627	2.3723	0.0013779	3.967	0.0023042	580.8465970126487	79.451	0.40097	81.168	80.982	81.383	1.7167					27	12	3	0	0	0	0.30098	2	33349	33301;33349		25.399	18.289	1	1304800			31252	3023	15481	15543	36043;36044	36044					0.10191472162091486
SIYGGFLLGV	10	Unmodified	_SIYGGFLLGV_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2893554568291	2	513.286943	1024.55933	2.7514	0.0014122	0.94175	0.00048339	3.6931	0.0018956	513.2878816584334	88.165	0.2753	88.165	87.999	88.274	0					14	8	2	0	0	0	0.62746	1	36840	36840		21.747	10.106	1	1163900			31253	367	15482	15544	36045	36045					0.04803528591401118
SIYGGFLLGV	10	Unmodified	_SIYGGFLLGV_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1025.572680652142	1	1025.56661	1024.55933	3.1301	0.0032101	1.3604	0.0013952	4.4905	0.0046053	1025.5684372250619	86.846	0.34948	87.938	87.74	88.09	1.0918					20	12	2	0	0	0	0.068389	1	36601	36601		71.134	38.828	1	6597900			31254	367	15482	15544	36046	36046					0.04803528591401118
SIYGGFLLGV	10	Unmodified	_SIYGGFLLGV_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2869140505791	2	513.286943	1024.55933	4.4963	0.0023079	-4.1735	-0.0021422	0.32284	0.00016571	513.2842159091025	86.335	0.29137	87.882	87.772	88.064	1.547					15	10	2	0	0	0	0.62746	1	36393	36393		21.747	5.8995	1	3965600			31255	367	15482	15544	36047	36047					0.04803528591401118
SIYKWMYYYYR	11	Unmodified	_SIYKWMYYYYR_					0	0	0			REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	REV__nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	818.3915893435478	2	818.386862	1634.75917	1.5661	0.0012817	3.3138	0.002712	4.8799	0.0039937	818.3896050477522	36.43	0.2635	36.43	36.331	36.595	0					43	24	2	0	0	0	1.0362	1	15339	15339		1.3295	0.25807	1	14270000	+		31256	8729	15483	15545	36048	36048					-0.03281784523164788
SIYNPERTITV	11	Unmodified	_SIYNPERTITV_					0	0	0		ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;ENSG00000073792|ENST00000382199|IGF2BP2	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8484374880791	2	646.845884	1291.67722	1.7283	0.0011179	-0.3287	-0.00021262	1.3996	0.00090531	646.84573364262	49.011	0.43113	50.988	50.761	51.192	1.9772					32	13	3	0	0	0	0.54794	1	20505	20505		22.658	3.2961	1	1820400			31257	904	15484	15546	36049	36049					0.043044363893841364
SIYNPERTITV	11	Unmodified	_SIYNPERTITV_					0	0	0		ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;ENSG00000073792|ENST00000382199|IGF2BP2	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	646.845884	1291.67722	1.6345	0.0010573	-0.13914	-9.0002E-05	1.4954	0.00096727	646.8457023529919	50.668	0.31105	50.996	50.793	51.104	0.32824	-0.022204	2.5086E-05	NaN	22.658	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1136100			31258	904	15484	15546							0.043044363893841364
SIYNPERTITV	11	Unmodified	_SIYNPERTITV_					0	0	0		ENST00000496495.1_1_3:185393074-185393625:-|nuORF;ENST00000550858.1_1_12:42681476-42682067:+|nuORF;nc|ENSG00000073792|Q9Y6M1-5|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-6|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-3|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-4|IGF2BP2;nc|ENSG00000073792|Q9Y6M1-1|IGF2BP2;ENSG00000073792|ENST00000382199|IGF2BP2	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	ENST00000496495.1_1_3:185393074-185393625:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	646.845884	1291.67722	1.7748	0.001148	0.092589	5.9891E-05	1.8674	0.0012079	646.8461221294855	49.593	0.46233	50.984	50.704	51.166	1.3911	-0.034414	0.00032487	NaN	22.658	35	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2049000			31259	904	15484	15546							0.043044363893841364
SIYQKQEV	8	Unmodified	_SIYQKQEV_					0	0	0			REV__ENSG00000198730|ENST00000361367|CTR9	REV__ENSG00000198730|ENST00000361367|CTR9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7669555544853	2	497.763832	993.513111	2.6038	0.0012961	2.7739	0.0013807	5.3776	0.0026768	497.7656346495092	44.716	0.34198	46.081	45.9	46.242	1.3653					24	10	3	0	0	0	0.83518	1	18723	18723		18.135	0	1	1987900	+		31260	11731	15485	15547	36050	36050					0.016094636892944436
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	644.3607055544853	2	644.358431	1286.70231	2.1827	0.0014064	-0.66162	-0.00042632	1.5211	0.00098012	644.3581035428391	54.938	0.25751	54.938	54.79	55.047	0					15	8	3	0	0	0	0.53402	1	22884	22884		26.021	15.221	1	683060			31261	4724	15486	15548	36051	36051					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.9080078005791	3	429.908046	1286.70231	1.2157	0.00052265	-0.55124	-0.00023698	0.66449	0.00028567	429.90736526743007	54.971	0.43977	54.971	54.692	55.132	0					34	18	3	0	0	0	0.6796	1	22906	22906		17.049	9.2025	1	3041500			31262	4724	15486	15548	36052	36052					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	644.3615600466728	2	644.358431	1286.70231	1.8348	0.0011823	1.1065	0.00071295	2.9413	0.0018952	644.3594418695681	54.226	0.44036	54.547	54.318	54.758	0.32088					28	13	3	0	0	0	0.53402	2	22693	22693;22763		26.021	13.489	1	797320			31263	4724	15486	15548	36053;36054	36053					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.9097473025322	3	429.908046	1286.70231	2.2855	0.00098256	1.5908	0.00068388	3.8763	0.0016664	429.9090298317003	54.206	0.5826	54.527	54.254	54.837	0.32088					33	18	2	0	0	0	0.55653	1	22706	22706		17.049	10.814	1	3265900			31264	4724	15486	15548	36055	36055					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.9090453982353	3	429.908046	1286.70231	0.82169	0.00035325	1.9775	0.00085013	2.7992	0.0012034	429.9090636470418	52.981	0.54469	54.382	54.089	54.633	1.4005					30	16	2	0	0	0	0.60754	2	22136	22136;22198		24.957	13.326	1	5890400			31265	4724	15486	15548	36056;36057	36056					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.3600341677666	2	644.358431	1286.70231	0.35745	0.00023033	2.2324	0.0014385	2.5898	0.0016688	644.3597713183301	52.959	0.41794	54.359	54.152	54.57	1.4005					20	12	2	0	0	0	0.53402	2	22165	22165;22215		26.021	15.87	1	1527000			31266	4724	15486	15548	36058;36059	36058					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.9090148806572	3	429.908046	1286.70231	1.3184	0.00056679	0.67733	0.00029119	1.9957	0.00085798	430.2424603665951	52.256	0.81334	54.228	53.892	54.705	1.9722					43	25	2	0	0	0	0.60754	1	21971	21971		19.987	5.7687	1	7274700			31267	4724	15486	15548	36060	36060					0.07042535982577647
SIYRDKLFFV	10	Unmodified	_SIYRDKLFFV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.8616210818291	2	644.358431	1286.70231	1.0948	0.00070547	-0.12301	-7.9261E-05	0.97183	0.0006262	644.3581335161297	52.341	0.44173	54.313	54.168	54.61	1.9722					21	13	2	0	0	0	0.60754	1	21992	21992		22.658	14.065	1	1184300			31268	4724	15486	15548	36061	36061					0.07042535982577647
SKAKKKWK	8	Unmodified	_SKAKKKWK_					0	0	0			REV__ENST00000463892.1_1_10:25010998-25011145:-|nuORF	REV__ENST00000463892.1_1_10:25010998-25011145:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	335.2190429568291	3	335.218555	1002.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.172	1	30.971	30.471	31.471	1.7987								0	0	0	1.0178	1	12225	12225		0.45834	0	1		+		31269	13221	15487	15549	36062	36062					0.13262336193417923
SKAKKKWK	8	Unmodified	_SKAKKKWK_					0	0	0			REV__ENST00000463892.1_1_10:25010998-25011145:-|nuORF	REV__ENST00000463892.1_1_10:25010998-25011145:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	335.2184936404228	3	335.218555	1002.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.615	1	31.413	30.913	31.913	1.7987								0	0	0	1.0178	1	12413	12413		0.45834	0	1		+		31270	13221	15487	15549	36063	36063					0.13262336193417923
SKCCWLRG	8	Unmodified	_SKCCWLRG_					0	0	0			REV__ENST00000520571.1_1_8:142199090-142200632:+|nuORF	REV__ENST00000520571.1_1_8:142199090-142200632:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1545898318291	3	318.154569	951.441877	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24	1	25.685	25.185	26.185	1.6845								0	0	0	1.0178	1	10022	10022		1.4819	0	1		+		31271	13626	15488	15550	36064	36064					-0.035786508207252155
SKEIIPLV	8	Unmodified	_SKEIIPLV_					0	0	0		tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	449.1451904177666	2	449.784036	897.553519	2.9971	0.0013481	3.0592	0.001376	6.0563	0.002724	449.7852899520022	61.841	0.55607	63.798	63.594	64.15	1.9571					27	17	2	0	0	0	2.3239	1	26003	26003		2.8892	0	1	915680			31272	17152	15489	15551	36065	36065					0.10064430079717113
SKEIIPLV	8	Unmodified	_SKEIIPLV_					0	0	0		tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	tr|A0A7D6ZVI1|A0A7D6ZVI1_9CLOTPhosphoenolpyruvatehydrolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13910PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	449.784036	897.553519	3.1153	0.0014012	3.621	0.0016287	6.7363	0.0030299	449.7852977786269	62.523	0.60488	63.936	63.679	64.284	1.4134	0.069059	0.00026154	NaN	2.8892	32	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1296000			31273	17152	15489	15551							0.10064430079717113
SKEKQRVI	8	Unmodified	_SKEKQRVI_					0	0	0		tr|A0A553SU78|A0A553SU78_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06485PE=4SV=1	tr|A0A553SU78|A0A553SU78_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06485PE=4SV=1	tr|A0A553SU78|A0A553SU78_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3024780154228	2	494.300916	986.587279	1.1906	0.00058849	0.18984	9.3836E-05	1.3804	0.00068233	494.30095493188617	80.196	1.2804	81.912	81.443	82.724	1.7167					95	41	5	0	0	0	0.88587	1	33541	33541		5.2307	0	1	53493000			31274	16681	15490	15552	36066	36066					0.09344851571484014
SKFIYRDES	9	Unmodified	_SKFIYRDES_					0	0	0		ENSG00000149972|ENST00000524871|CNTN5;nc|ENSG00000149972|O94779-2|CNTN5;nc|ENSG00000149972|O94779-4|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	572.3277465701103	2	572.785296	1143.55604	2.4539	0.0014056	-1.8363	-0.0010518	0.61759	0.00035375	572.7843997818837	85.583	0.2795	85.835	85.695	85.975	0.25227					16	8	2	0	0	0	0.1165	1	35784	35784		9.3831	2.0939	1	670390			31275	3259	15491	15553	36067	36067					-0.009997662532896356
SKGKVLGKL	9	Unmodified	_SKGKVLGKL_					0	0	0			REV__nc|ENSG00000117868|A0FGR8-4|ESYT2	REV__nc|ENSG00000117868|A0FGR8-4|ESYT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.3123657107353	2	465.310752	928.606951	3.5439	0.001649	0.36315	0.00016898	3.907	0.001818	465.3107584799024	109.16	0.357	109.31	109.13	109.49	0.1548					37	16	3	0	0	0	0.83753	1	47349	47349		1.8442	0	1	51929000	+		31276	9509	15492	15554	36068	36068					0.13979227582240128
SKGTYIRSLCY	11	Unmodified	_SKGTYIRSLCY_					0	0	0		tr|A0A7D6VU94|A0A7D6VU94_9CLOTtRNApseudouridinesynthaseBOS=ClostridiumintestinaleOX=36845GN=truBPE=3SV=1	tr|A0A7D6VU94|A0A7D6VU94_9CLOTtRNApseudouridinesynthaseBOS=ClostridiumintestinaleOX=36845GN=truBPE=3SV=1	tr|A0A7D6VU94|A0A7D6VU94_9CLOTtRNApseudouridinesynthaseBOS=ClostridiumintestinaleOX=36845GN=truBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9544	1	3.5886	3.0886	4.0886	0.63417								0	0	0	0.63775	1	1218	1218		0.094841	0	1				31277	16944	15493	15555	36069	36069					0.010571113458354375
SKHGHCMMK	9	Unmodified	_SKHGHCMMK_					0	0	0			REV__ENST00000344922.9_2_1:222839752-222839908:+|nuORF	REV__ENST00000344922.9_2_1:222839752-222839908:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	353.1928588747978	3	353.494597	1057.46196	1.5614	0.00055195	1.0315	0.00036464	2.5929	0.00091659	353.828539539223	62.676	0.15559	63.005	62.943	63.099	0.32974					5	4	2	0	0	0	0.11944	1	26259	26259		0.96228	0	1	257260	+		31278	12521	15494	15556	36070	36070					-0.06447223152417791
SKHLVLIEEVA	11	Unmodified	_SKHLVLIEEVA_					0	0	0			REV__tr|A0A7D6ZXT7|A0A7D6ZXT7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00400PE=4SV=1	REV__tr|A0A7D6ZXT7|A0A7D6ZXT7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_00400PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	619.3660156130791	2	619.36117	1236.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.27	1	105.43	104.93	105.93	0.16679								0	0	0	0.63775	1	44732	44732		1.1933	0.735	1		+		31279	15765	15495	15557	36071	36071					0.09890214774418382
SKIGKAIT	8	Unmodified	_SKIGKAIT_					0	0	0			REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	409.2604553103447	2	409.260728	816.506903	0.72119	0.00029516	-2.1981	-0.0008996	-1.4769	-0.00060444	409.25966088111403	63.843	1.1899	63.843	63.24	64.43	0					87	37	3	0	0	0	0.89051	2	26507	26507;26663		2.3027	0	1	3268700	+		31280	15465	15496	15558	36072;36073	36072					0.0913099024839994
SKIGKAIT	8	Unmodified	_SKIGKAIT_					0	0	0			REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	409.260728	816.506903	0.72119	0.00029516	-2.1981	-0.0008996	-1.4769	-0.00060444	409.25966088111403	63.843	1.1899	63.843	63.24	64.43	0	-0.12827	0.0010396	NaN	2.3027	87	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3268700	+		31281	15465	15496	15558							0.0913099024839994
SKIGKAIT	8	Unmodified	_SKIGKAIT_					0	0	0			REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	409.260728	816.506903	2.0769	0.00084999	-4.0271	-0.0016481	-1.9502	-0.00079815	409.2589297597248	63.625	0.89703	63.954	63.504	64.401	0.32899	-0.017294	-0.00045746	NaN	2.3027	76	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5184300	+		31282	15465	15496	15558							0.0913099024839994
SKIGKAIT	8	Unmodified	_SKIGKAIT_					0	0	0			REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	409.260728	816.506903	2.627	0.0010751	-3.7731	-0.0015442	-1.1461	-0.00046906	409.259152172262	62.548	1.0126	63.961	63.583	64.596	1.4134	-0.010388	-0.00024955	NaN	2.3027	48	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1356300	+		31283	15465	15496	15558							0.0913099024839994
SKIGKAIT	8	Unmodified	_SKIGKAIT_					0	0	0			REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	REV__tr|A0A7D6VSX7|A0A7D6VSX7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06930PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	409.260728	816.506903	2.9681	0.0012147	-3.8768	-0.0015866	-0.90864	-0.00037187	409.2591249665673	62.17	0.70013	64.127	63.719	64.419	1.9571	0.15595	-0.0003344	NaN	2.3027	41	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1350900	+		31284	15465	15496	15558							0.0913099024839994
SKIRAFIL	8	Unmodified	_SKIRAFIL_					0	0	0		nc|ENSG00000136830|Q96TA1-2|NIBAN2;ENSG00000136830|ENST00000373312|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	nc|ENSG00000136830|Q96TA1-2|NIBAN2	MSMS	GG20161007_CRH_Patient100_A02_01	1	474.3069335818291	2	474.30547	946.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.8	1	72.8	72.3	73.3	0								0	0	0	1.0178	1	30310	30310		0.6015	0	1				31285	2741	15497	15559	36074	36074					0.12095244927797921
SKKGKKVT	8	Unmodified	_SKKGKKVT_					0	0	0		nc|ENSG00000226266|Q9UIF8-4|BAZ2B;nc|ENSG00000226266|Q9UIF8-2|BAZ2B;nc|ENSG00000226266|Q9UIF8-5|BAZ2B;nc|ENSG00000226266|Q9UIF8-3|BAZ2B;ENSG00000123636|ENST00000392783|BAZ2B;ENST00000548440.1_1_2:160178483-160189161:-|nuORF	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	nc|ENSG00000226266|Q9UIF8-4|BAZ2B	MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2895080447197	2	438.287277	874.560001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.18	1	105.24	104.74	105.74	0.056801								0	0	0	1.0178	1	44534	44534		0.69038	0	1				31286	2197	15498	15560	36075	36075					0.1177036803107967
SKKKATTS	8	Unmodified	_SKKKATTS_					0	0	0		tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7521545290947	2	425.753267	849.491981	2.0609	0.00087743	-3.5558	-0.0015139	-1.4949	-0.00063646	425.75158044801435	69.343	0.46507	70.708	70.443	70.908	1.3657					34	15	3	0	0	0	0.89198	2	29097	29097;29154		0	0	1	9629300			31287	17134	15499	15561	36076;36077	36076					0.061214983804006806
SKKKATTS	8	Unmodified	_SKKKATTS_					0	0	0		tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7519103884697	2	425.753267	849.491981	1.2759	0.00054322	-3.287	-0.0013995	-2.0111	-0.00085624	425.75174952932093	68.983	0.48356	70.836	70.558	71.041	1.853					36	15	3	0	0	0	0.89181	3	28925	28881;28925;28980		0.6015	0.6015	1	8222300			31288	17134	15499	15561	36078;36079;36080	36079					0.061214983804006806
SKKKEKKKKER	11	Unmodified	_SKKKEKKKKER_					0	0	0			REV__ENST00000369754.7_2_6:82459276-82459393:-|nuORF	REV__ENST00000369754.7_2_6:82459276-82459393:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.9732238650322	3	472.97182	1415.89363	2.2546	0.0010664	-1.1903	-0.00056297	1.0643	0.00050339	472.97106580553475	40.859	1.4567	40.859	40.299	41.755	0					131	45	4	0	0	0	1.0402	1	17375	17375		0.094841	0	1	4678700	+		31289	12651	15500	15562	36081	36081					0.20232037013715853
SKKKKKKKG	9	Unmodified	_SKKKKKKKG_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MSMS	GG20161007_CRH_Patient100_A02_02	2	530.3726684451103	2	530.371675	1058.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.068	1	99.149	98.649	99.649	0.080376								0	0	0	0.42693	1	41476	41476		0.45834	0	1		+		31290	10964	15501	15563	36082	36082					0.20178269664597792
SKKKKKKKG	9	Unmodified	_SKKKKKKKG_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3724243044853	2	530.371675	1058.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.44	1	101.61	101.11	102.11	0.17032								0	0	0	0.42693	1	42685	42685		0	0	1		+		31291	10964	15501	15563	36083	36083					0.20178269664597792
SKKKKKKKG	9	Unmodified	_SKKKKKKKG_					0	0	0			REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	REV__nc|ENSG00000169862|Q9UQB3-2|CTNND2	MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3730956912041	2	530.371675	1058.7288	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.531	1	98.787	98.287	99.287	0.25636								0	0	0	0.42693	1	41468	41468		0	0	1		+		31292	10964	15501	15563	36084	36084					0.20178269664597792
SKKLAPIPP	9	Unmodified	_SKKLAPIPP_					0	0	0		nc|ENSG00000006740|Q17R89-2|ARHGAP44;nc|ENSG00000006740|Q17R89-3|ARHGAP44;ENSG00000006740|ENST00000379672|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.8052856326103	2	475.805303	949.596052	3.2827	0.0015619	-2.0715	-0.00098564	1.2111	0.00057627	475.80383820554914	106.13	0.14046	106.29	106.21	106.35	0.15781					17	7	4	0	0	0	0.77526	1	45385	45385		4.3292	0.38484	1	109740000			31293	513	15502	15564	36085	36085					0.11923825207929895
SKKLAPIPP	9	Unmodified	_SKKLAPIPP_					0	0	0		nc|ENSG00000006740|Q17R89-2|ARHGAP44;nc|ENSG00000006740|Q17R89-3|ARHGAP44;ENSG00000006740|ENST00000379672|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	475.805303	949.596052	3.5232	0.0016764	-1.776	-0.00084503	1.7472	0.00083134	475.8039614302844	106.16	0.12257	106.21	106.15	106.27	0.05455	-0.043085	0.00029813	NaN	4.3292	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9224600			31294	513	15502	15564							0.11923825207929895
SKKLAPIPP	9	Unmodified	_SKKLAPIPP_					0	0	0		nc|ENSG00000006740|Q17R89-2|ARHGAP44;nc|ENSG00000006740|Q17R89-3|ARHGAP44;ENSG00000006740|ENST00000379672|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	nc|ENSG00000006740|Q17R89-2|ARHGAP44	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	475.805303	949.596052	3.387	0.0016115	-2.3974	-0.0011407	0.98958	0.00047085	475.8032116118347	106.1	0.1594	106.26	106.19	106.34	0.16174	0.0085307	-0.0002932	NaN	4.3292	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	89726000			31295	513	15502	15564							0.11923825207929895
SKKLKKRKQIL	11	Unmodified	_SKKLKKRKQIL_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MSMS	GG20161007_CRH_Patient100_W632_01	3	457.3184081912041	3	457.317039	1368.92929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.32	1	107.48	106.98	107.98	0.15781								0	0	0	0.63775	1	46132	46132		0.094841	0	1		+		31296	11856	15503	15565	36086	36086					0.2595811926141778
SKKLKKRKQIL	11	Unmodified	_SKKLKKRKQIL_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MSMS	GG20161007_CRH_Patient100_W632_02	4	457.3186828494072	3	457.317039	1368.92929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.3	1	107.45	106.95	107.95	0.15795								0	0	0	0.63775	1	46063	46063		0.40827	0.31342	1		+		31297	11856	15503	15565	36087	36087					0.2595811926141778
SKKLRKKKRIY	11	Unmodified	_SKKLRKKKRIY_					0	0	0		tr|A0A7D6VR67|A0A7D6VR67_9CLOTDUF3139domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05620PE=4SV=1	tr|A0A7D6VR67|A0A7D6VR67_9CLOTDUF3139domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05620PE=4SV=1	tr|A0A7D6VR67|A0A7D6VR67_9CLOTDUF3139domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05620PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	724.4841796755791	2	724.48282	1446.95109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.33	1	108.48	107.98	108.98	0.15781								0	0	0	0.63775	1	46807	46807		0.30703	0.30703	1				31298	16820	15504	15566	36088	36088					0.24548924009968687
SKKQKKHR	8	Unmodified	_SKKQKKHR_					0	0	0		THRAP3|p.F819Cfs*5|1|0.27|ENSG00000054118|chr1:36301037-36301038|TT/-|frameshift_variant;THRAP3|p.Q861Kfs*35|1|0.06|ENSG00000054118|chr1:36301627-36301627|T/-|frameshift_variant;ENSG00000054118|ENST00000354618|THRAP3	THRAP3|p.F819Cfs*5|1|0.27|ENSG00000054118|chr1:36301037-36301038|TT/-|frameshift_variant	THRAP3|p.F819Cfs*5|1|0.27|ENSG00000054118|chr1:36301037-36301038|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2207519412041	3	347.220958	1038.64105	1.3494	0.00046853	-0.84255	-0.00029255	0.50681	0.00017598	347.22132191090145	47.074	0.55872	47.404	47.077	47.636	0.33034					41	17	3	0	0	0	0.89187	1	19715	19715		0.40072	0	1	2146300			31299	709	15505	15567	36089	36089					0.12327068793820217
SKKQLVKVA	9	Unmodified	_SKKQLVKVA_					0	0	0			REV__ENSG00000101049|ENST00000373100|SGK2	REV__ENSG00000101049|ENST00000373100|SGK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2225829958916	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.623	1	23.856	23.356	24.356	0.23306								0	0	0	0.42693	1	9851	9851		1.7423	0.089654	1		+		31300	9021	15506	15568	36090	36090					0.1442289912798742
SKKQLVKVA	9	Unmodified	_SKKQLVKVA_					0	0	0			REV__ENSG00000101049|ENST00000373100|SGK2	REV__ENSG00000101049|ENST00000373100|SGK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2224304080009	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.833	1	24.075	23.575	24.575	0.24251								0	0	0	0.42693	1	9940	9940		3.5871	2.6248	1		+		31301	9021	15506	15568	36091	36091					0.1442289912798742
SKKRKALA	8	Unmodified	_SKKRKALA_					0	0	0		nc|ENSG00000114841|Q9P2D7-8|DNAH1;ENSG00000114841|ENST00000420323|DNAH1;nc|ENSG00000114841|Q9P2D7-6|DNAH1;ENST00000486752.5_1_3:52350520-52422757:+|nuORF;nc|ENSG00000114841|Q9P2D7-3|DNAH1;ENST00000497875.1_1_3:52356446-52387784:+|nuORF;DNAH1|p.Q1748Tfs*9|1|0.17|ENSG00000114841|chr3:52363140-52363141|-/AA|frameshift_variant;DNAH1|p.E2311Rfs*58|1|0.32|ENSG00000114841|chr3:52372997-52372998|-/A|frameshift_variant	nc|ENSG00000114841|Q9P2D7-8|DNAH1	nc|ENSG00000114841|Q9P2D7-8|DNAH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.2017089724541	3	301.202905	900.586885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.3	1	106.3	105.8	106.8	0								0	0	0	1.0178	1	45331	45331		0	0	1				31302	1884	15507	15569	36092	36092					0.13261476642253456
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2454406619072	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.618	1	94.618	94.118	95.118	0								0	0	0	1.0178	1	39544	39544		0	0	1				31303	5522	15508	15570	36093	36093					0.19981402867392717
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2441284060478	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.828	1	94.828	94.328	95.328	0								0	0	0	1.0178	1	39632	39632		0	0	1				31304	5522	15508	15570	36094	36094					0.19981402867392717
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2444640994072	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.95	1	94.95	94.45	95.45	0								0	0	0	1.0178	1	39682	39682		0	0	1				31305	5522	15508	15570	36095	36095					0.19981402867392717
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2451965212822	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.105	1	95.105	94.605	95.605	0								0	0	0	1.0178	1	39745	39745		0	0	1				31306	5522	15508	15570	36096	36096					0.19981402867392717
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	344.2441284060478	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.545	1	99.545	99.045	100.05	0								0	0	0	1.0178	1	41663	41663		0	0	1				31307	5522	15508	15570	36097	36097					0.19981402867392717
SKKRKKKK	8	Unmodified	_SKKRKKKK_					0	0	0		ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	ENST00000216797.9_1_14:35871071-35871197:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2443420290947	3	344.245104	1029.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.28	109.78	110.78	0.16133								0	0	0	1.0178	1	47843	47843		0	0	1				31308	5522	15508	15570	36098	36098					0.19981402867392717
SKKRNRGV	8	Unmodified	_SKKRNRGV_					0	0	0			REV__ENST00000507019.5_1_4:84380905-84382182:+|nuORF	REV__ENST00000507019.5_1_4:84380905-84382182:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	314.7117492556572	3	315.529792	943.567546	-2.8468	-0.00089826	-3.3474	-0.0010562	-6.1942	-0.0019545	315.5288792573166	27.326	0.3333	27.326	27.107	27.441	0					21	10	3	0	0	0	2.3239	1	11386	11386		1.6526	0.17072	1	666520	+		31309	13541	15509	15571	36099	36099					0.09350520351370051
SKKSNKGKNV	10	Unmodified	_SKKSNKGKNV_					0	0	0			REV__ENSG00000086102|ENST00000379540|NFX1	REV__ENSG00000086102|ENST00000379540|NFX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3235961794853	2	545.32238	1088.63021	1.5284	0.00083346	-0.62711	-0.00034198	0.90128	0.00049149	545.3217014907435	77.87	0.25212	77.87	77.749	78.001	0					12	7	2	0	0	0	0.89803	1	32422	32422		1.3295	0	1	581150	+		31310	8858	15510	15572	36100	36100					0.08943621628895926
SKKSNKGKNV	10	Unmodified	_SKKSNKGKNV_					0	0	0			REV__ENSG00000086102|ENST00000379540|NFX1	REV__ENSG00000086102|ENST00000379540|NFX1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	545.32238	1088.63021	1.5284	0.00083346	-0.62711	-0.00034198	0.90128	0.00049149	545.3217014907435	77.87	0.25212	77.87	77.749	78.001	0	0	0	NaN	1.3295	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	581150	+		31311	8858	15510	15572							0.08943621628895926
SKLKTPRSII	10	Unmodified	_SKLKTPRSII_					0	0	0			REV__ENSG00000111331|ENST00000228928|OAS3	REV__ENSG00000111331|ENST00000228928|OAS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.5810119509697	3	381.580041	1141.71829	-0.45981	-0.00017546	4.2192	0.0016099	3.7593	0.0014345	381.58122052091613	70.521	0.26865	70.521	70.449	70.718	0					12	8	2	0	0	0	0.88508	1	29377	29377		3.0723	0.44103	1	556780	+		31312	9323	15511	15573	36101	36101					0.15310242219493375
SKLKTPRSII	10	Unmodified	_SKLKTPRSII_					0	0	0			REV__ENSG00000111331|ENST00000228928|OAS3	REV__ENSG00000111331|ENST00000228928|OAS3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	381.580041	1141.71829	1.2146	0.00046348	3.2938	0.0012568	4.5084	0.0017203	381.58135456055464	69.894	0.31612	70.217	69.972	70.288	0.32224	-0.15243	-0.00021264	NaN	3.0723	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	334990	+		31313	9323	15511	15573							0.15310242219493375
SKLLHKSLLS	10	Unmodified	_SKLLHKSLLS_					0	0	0			REV__nc|ENSG00000093009|O75419-2|CDC45	REV__nc|ENSG00000093009|O75419-2|CDC45	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3529540896416	2	563.353148	1124.69174	2.2434	0.0012638	-2.4888	-0.0014021	-0.24538	-0.00013823	563.3517014406947	83.206	0.98624	83.476	83.029	84.016	0.27029					60	31	3	0	0	0	0.89803	1	34769	34769		0.35063	0	1	1708100	+		31314	8920	15512	15574	36102	36102					0.13438553328182934
SKLLRHRRK	9	Unmodified	_SKLLRHRRK_					0	0	0		nc|ENSG00000070476|Q2QGD7-3|ZXDC;nc|ENSG00000070476|Q2QGD7-2|ZXDC;ENSG00000070476|ENST00000389709|ZXDC	nc|ENSG00000070476|Q2QGD7-3|ZXDC	nc|ENSG00000070476|Q2QGD7-3|ZXDC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	597.6012451052666	2	597.388722	1192.76289	3.2941	0.0019678	-3.4989	-0.0020902	-0.20485	-0.00012237	597.3859807318435	108.59	0.15593	108.74	108.66	108.81	0.1548					12	7	2	0	0	0	0.1195	1	46896	46896		0.45834	0	1	9612600			31315	853	15513	15575	36103	36103					0.17422110876191255
SKLPAAPV	8	Unmodified	_SKLPAAPV_					0	0	0		ENST00000527418.5_1_1:155030189-155030370:+|nuORF	ENST00000527418.5_1_1:155030189-155030370:+|nuORF	ENST00000527418.5_1_1:155030189-155030370:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.7408019900322	2	391.742171	781.469789	1.919	0.00075177	-3.0807	-0.0012069	-1.1617	-0.00045508	391.74038905137934	63.625	1.3107	63.954	63.38	64.691	0.32899					79	41	3	0	0	0	0.89051	2	26636	26636;26745		2.3027	0	1	6378200			31316	7140	15514	15576	36104;36105	36104					0.07031318702649969
SKLPVKNK	8	Unmodified	_SKLPVKNK_					0	0	0			REV__tr|A0A7D6W3N6|A0A7D6W3N6_9CLOTDNAtopoisomerase1OS=ClostridiumintestinaleOX=36845GN=topAPE=3SV=1	REV__tr|A0A7D6W3N6|A0A7D6W3N6_9CLOTDNAtopoisomerase1OS=ClostridiumintestinaleOX=36845GN=topAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.8649474978447	3	305.19916	912.575651	-3.0299	-0.00092473	3.3348	0.0010178	0.30489	9.3052E-05	305.200139214548	23.421	0.48833	23.421	23.229	23.718	0					36	15	3	0	0	0	2.3239	1	9783	9783		6.2058	0.47393	1	3201400	+		31317	15615	15515	15577	36106	36106					0.11586654548125352
SKMNLLLG	8	Unmodified	_SKMNLLLG_					0	0	0		ENST00000375412.9_2_9:96215052-96215148:-|nuORF	ENST00000375412.9_2_9:96215052-96215148:-|nuORF	ENST00000375412.9_2_9:96215052-96215148:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	875.5003539919853	1	875.5019	874.494624	2.1422	0.0018755	-2.7174	-0.0023791	-0.57512	-0.00050352	875.4986271048695	63.104	0.62851	65.048	64.845	65.473	1.9444					40	19	3	0	0	0	0.34211	1	26481	26481		67.344	9.8725	1	5223300			31318	6181	15516	15578	36107	36107					0.052356305137323034
SKPGIGVP	8	Unmodified	_SKPGIGVP_					0	0	0			REV__tr|A0A7D6VT43|A0A7D6VT43_9CLOTDNA(cytosine-5-)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06590PE=3SV=1	REV__tr|A0A7D6VT43|A0A7D6VT43_9CLOTDNA(cytosine-5-)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06590PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4443847537041	1	754.445766	753.438489	1.8967	0.001431	-3.0771	-0.0023215	-1.1803	-0.00089049	754.4430775807334	65.132	0.5122	65.459	65.162	65.674	0.32689					35	15	3	0	0	0	0.88587	1	27257	27257		5.2307	2.3415	1	4152000	+		31319	15474	15517	15579	36108	36108					0.05190745668573982
SKPKPGAA	8	Unmodified	_SKPKPGAA_					0	0	0		nc|ENSG00000183773|Q96NN9-2|AIFM3	nc|ENSG00000183773|Q96NN9-2|AIFM3	nc|ENSG00000183773|Q96NN9-2|AIFM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2252380251884	2	378.224146	754.433738	2.6467	0.001001	1.7844	0.00067489	4.4311	0.0016759	378.2247237220527	100.69	0.12187	100.77	100.69	100.81	0.072716					6	3	2	0	0	0	0.89181	1	42163	42163		0.6015	0	1	2896200			31320	7945	15518	15580	36109	36109					0.046698615258037535
SKQRDLKI	8	Unmodified	_SKQRDLKI_					0	0	0		ENSG00000172725|ENST00000341356|CORO1B	ENSG00000172725|ENST00000341356|CORO1B	ENSG00000172725|ENST00000341356|CORO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3039733767509	2	494.300916	986.587279	2.6068	0.0012885	0.076175	3.7653E-05	2.683	0.0013262	494.30092697220897	80.494	0.58011	81.745	81.45	82.03	1.2512					68	18	5	0	0	0	0.87701	1	33712	33712		10.824	0	1	104910000			31321	4249	15519	15581	36110	36110					0.09344851571461277
SKRGRQHL	8	Unmodified	_SKRGRQHL_					0	0	0		nc|ENSG00000177301|P16389-2|KCNA2	nc|ENSG00000177301|P16389-2|KCNA2	nc|ENSG00000177301|P16389-2|KCNA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.2893554568291	2	491.288674	980.562795	1.2532	0.00061567	-0.35873	-0.00017624	0.89444	0.00043943	491.28893206043585	97.361	0.30917	97.361	97.228	97.537	0					19	9	3	0	0	0	0.8873	1	40674	40674		4.3292	0	1	4379400			31322	7936	15520	15582	36111	36111					0.07173636208608514
SKRKARPLG	9	Unmodified	_SKRKARPLG_					0	0	0			REV__P2RY2|p.S233L|1|0.09|ENSG00000175591|chr11:73234857-73234857|C/T|missense_variant	REV__P2RY2|p.S233L|1|0.09|ENSG00000175591|chr11:73234857-73234857|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	338.2201415896416	3	338.217325	1011.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.11	1	101.31	100.81	101.81	0.20118								0	0	0	0.42693	1	42514	42514		0.26902	0	1		+		31323	11156	15521	15583	36112	36112					0.12479666419540081
SKRKKAKKHQK	11	Unmodified	_SKRKKAKKHQK_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86	REV__ENSG00000159761|ENST00000403458|C16orf86	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2969543337822	3	456.296638	1365.86809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.32	1	103.49	102.99	103.99	0.16445								0	0	0	0.63775	1	43540	43540		0.094841	0	1		+		31324	10581	15522	15584	36113	36113					0.19978607281950644
SKRKLHISSR	10	Unmodified	_SKRKLHISSR_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3710204958916	2	606.370195	1210.72584	2.4698	0.0014976	-0.25012	-0.00015167	2.2197	0.001346	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	0.89803	1	31996	31996		1.4819	0	1	6795700			31325	2586	15523	15585	36114	36114					0.12890394539772387
SKRKPPPKKK	10	Unmodified	_SKRKPPPKKK_					0	0	0		ENSG00000130165|ENST00000252445|ELOF1	ENSG00000130165|ENST00000252445|ELOF1	ENSG00000130165|ENST00000252445|ELOF1	MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3989135622978	2	597.395682	1192.77681	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.55	1	100.73	100.23	101.23	0.18047								0	0	0	0.66176	1	42311	42311		1.4819	0.28856	1				31326	2418	15524	15586	36115	36115					0.18813343584611175
SKRKYDKRRKK	11	Unmodified	_SKRKYDKRRKK_					0	0	0		nc|ENSG00000133863|Q9BXT5|TEX15;ENSG00000133863|ENST00000643185|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	nc|ENSG00000133863|Q9BXT5|TEX15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	374.1002685427666	4	373.98503	1491.91101	-0.0079146	-2.9599E-06	-0.75603	-0.00028274	-0.76394	-0.0002857	373.98485847032975	29.432	0.27109	30.714	30.585	30.856	1.2825					13	8	2	0	0	0	0.14606	1	12293	12293		0	0	1	561130			31327	2586	15525	15587	36116	36116					0.1847337733936456
SKRRKKKPAIL	11	Unmodified	_SKRRKKKPAIL_					0	0	0		ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	ENSG00000104856|ENST00000221452|RELB	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.3026916384697	3	442.301501	1323.88267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.634	1	91.824	91.324	92.324	0.19042								0	0	0	0.63775	1	38379	38379		0.094841	0.011491	1				31328	1482	15526	15588	36117	36117					0.23368679430132033
SKRRKLRV	8	Unmodified	_SKRRKLRV_					0	0	0		nc|ENSG00000173083|Q9Y251-3|HPSE;nc|ENSG00000173083|Q9Y251-2|HPSE;ENSG00000173083|ENST00000311412|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	nc|ENSG00000173083|Q9Y251-3|HPSE	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2370788455009	3	348.23672	1041.68833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.151	1	33.976	33.476	34.476	1.8246								0	0	0	1.0178	1	13476	13476		0.35063	0	1				31329	4265	15527	15589	36118	36118					0.16915348064844693
SKRRSGKV	8	Unmodified	_SKRRSGKV_					0	0	0			REV__ENST00000545521.5_1_16:29822114-29822264:+|nuORF	REV__ENST00000545521.5_1_16:29822114-29822264:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1731445193291	2	459.2856	916.556647	3.1928	0.0014664	-1.3255	-0.0006088	1.8673	0.00085761	459.28470504288515	85.633	0.34186	85.885	85.695	86.037	0.25227					15	10	2	0	0	0	2.3239	1	35868	35868		0	0	1	455110	+		31330	13801	15528	15590	36119	36119					0.09503117977089914
SKRRVNYLK	9	Unmodified	_SKRRVNYLK_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.5724670290947	3	388.571768	1162.69348	0.39031	0.00015166	0.43275	0.00016816	0.82306	0.00031982	388.57191902025363	90.486	0.61919	90.486	90.193	90.812	0					63	19	5	0	0	0	0.847	1	37889	37889		0.96228	0.26461	1	38226000			31331	7730	15529	15591	36120	36120					0.1186360713677459
SKRRVNYLK	9	Unmodified	_SKRRVNYLK_					0	0	0		L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	L1PA11_dup257|chr1:220255199-220257096:+|1.2080698086480397|0.4810012897383803|1.33|429.0|58|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.5728942751884	3	388.571768	1162.69348	4.4407	0.0017255	-1.7527	-0.00068103	2.688	0.0010445	388.57107898025527	89.642	0.52937	90.662	90.397	90.926	1.0199					54	16	4	0	0	0	0.847	1	37866	37866		0.96228	0.96228	1	10538000			31332	7730	15529	15591	36121	36121					0.1186360713677459
SKRSRVAI	8	Unmodified	_SKRSRVAI_					0	0	0			REV__ENSG00000183090|ENST00000329798|FREM3	REV__ENSG00000183090|ENST00000329798|FREM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.7889587283134	2	458.787976	915.561398	3.05	0.0013993	-0.77567	-0.00035587	2.2743	0.0010434	458.7876834135038	74.842	1.2207	76.624	75.914	77.135	1.7817					103	38	6	0	0	0	0.8909	1	31471	31471		2.0598	0	1	145970000	+		31333	11374	15530	15592	36122	36122					0.10024002119837405
SKSNKIEQ	8	Unmodified	_SKSNKIEQ_					0	0	0			REV__tr|A0A553SJG8|A0A553SJG8_NIACIHD-GYPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16740PE=4SV=1	REV__tr|A0A553SJG8|A0A553SJG8_NIACIHD-GYPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2546264529228	2	467.253631	932.49271	3.5794	0.0016725	-2.5134	-0.0011744	1.066	0.00049811	467.25232168611643	97.088	0.15666	97.394	97.289	97.446	0.3062					13	5	3	0	0	0	0.89124	1	40831	40831		1.8442	0	1	14370000	+		31334	14903	15531	15593	36123	36123					0.023762930294651596
SKSNKIEQ	8	Unmodified	_SKSNKIEQ_					0	0	0			REV__tr|A0A553SJG8|A0A553SJG8_NIACIHD-GYPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16740PE=4SV=1	REV__tr|A0A553SJG8|A0A553SJG8_NIACIHD-GYPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_16740PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	467.253631	932.49271	3.5794	0.0016725	-2.5134	-0.0011744	1.066	0.00049811	467.25232168611643	97.088	0.15666	97.394	97.289	97.446	0.3062	-0.06467	0.00026928	NaN	1.8442	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14370000	+		31335	14903	15531	15593							0.023762930294651596
SKTSGKAK	8	Unmodified	_SKTSGKAK_					0	0	0		nc|ENSG00000123243|Q86UX2-4|ITIH5;ENST00000476417.5_1_10:7615057-7659255:-|nuORF	nc|ENSG00000123243|Q86UX2-4|ITIH5	nc|ENSG00000123243|Q86UX2-4|ITIH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	403.7403442263603	2	403.74016	805.465767	1.7143	0.00069212	-3.1982	-0.0012912	-1.4839	-0.00059911	403.7388394231277	66.008	0.81831	67.407	66.849	67.668	1.3989					75	26	5	0	0	0	0.89198	2	27658	27658;27756		0	0	1	9683300			31336	6787	15532	15594	36124;36125	36124					0.05525229208944893
SKVGKRYF	8	Unmodified	_SKVGKRYF_					0	0	0			REV__nc|ENSG00000176974|P34896-4|SHMT1	REV__nc|ENSG00000176974|P34896-4|SHMT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1610900759697	3	328.859027	983.55525	0.01495	4.9165E-06	1.5092	0.00049633	1.5242	0.00050124	328.8593973430235	23.355	0.2753	24.57	24.443	24.718	1.2145					11	8	2	0	0	0	2.3239	1	9813	9813		0.45834	0	1	201420	+		31337	11199	15533	15595	36126	36126					0.06281483888324146
SKWIARLRHI	10	Unmodified	_SKWIARLRHI_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;ENST00000569930.1_1_16:2133412-2138608:+|nuORF	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2642700076103	3	427.263046	1278.76731	2.0565	0.00087865	2.0479	0.00087499	4.1044	0.0017536	427.26385575058407	40.294	0.52867	42.157	41.925	42.453	1.8624					50	16	4	0	0	0	0.8872	2	16895	16895;16936		2.8433	0.21205	1	23422000			31338	1421	15534	15596	36127;36128	36127					0.13907575299117525
SKWKGILH	8	Unmodified	_SKWKGILH_					0	0	0		tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7888061404228	2	484.787444	967.560336	1.1735	0.00056888	1.9409	0.00094094	3.1144	0.0015098	484.78832550988284	26.401	0.358	26.401	26.206	26.564	0					34	11	4	0	0	0	0.88663	1	10998	10998		4.756	0	1	10175000			31339	16361	15535	15597	36129	36129					0.07525787750955715
SKWKGILH	8	Unmodified	_SKWKGILH_					0	0	0		tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7883788943291	2	484.787444	967.560336	0.50858	0.00024655	1.3155	0.00063775	1.8241	0.0008843	484.78805104081744	24.278	0.3653	25.962	25.753	26.118	1.6845					34	11	4	0	0	0	0.88663	1	10140	10140		4.756	0	1	6280400			31340	16361	15535	15597	36130	36130					0.07525787750955715
SKWKGILH	8	Unmodified	_SKWKGILH_					0	0	0		tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	tr|A0A553SLX3|A0A553SLX3_NIACIPermeaseOS=NialliacirculansOX=1397GN=CEQ21_21445PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7885009646416	2	484.787444	967.560336	0.51901	0.00025161	0.66182	0.00032084	1.1808	0.00057245	484.78773713039647	24.6	0.3024	26.285	26.118	26.421	1.6845					20	10	3	0	0	0	0.88663	1	10296	10296		4.756	0	1	4754400			31341	16361	15535	15597	36131	36131					0.07525787750955715
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	397.2232238650322	3	397.220735	1188.64038	2.1672	0.00086087	2.1399	0.00085002	4.3072	0.0017109	397.2219177170677	61.125	0.46877	61.454	61.173	61.641	0.32974					35	14	4	0	0	0	0.82654	1	25571	25571		2.2828	0.3764	1	1048800	+		31342	13247	15536	15598	36132	36132					0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2238952517509	3	397.220735	1188.64038	2.443	0.00097043	2.8378	0.0011272	5.2809	0.0020977	397.22201285806614	59.207	0.43575	61.176	60.94	61.376	1.969					28	13	3	0	0	0	0.82654	1	24861	24861		2.2828	0.69049	1	1247800	+		31343	13247	15536	15598	36133	36133					0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	397.220735	1188.64038	0.59664	0.000237	4.031	0.0016012	4.6277	0.0018382	397.22264905624786	61.816	0.41085	61.816	61.582	61.993	0	0.18102	0.0012097	NaN	2.2828	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	837400	+		31344	13247	15536	15598							0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	397.220735	1188.64038	0.54367	0.00021596	3.4191	0.0013581	3.9628	0.0015741	397.2225915058803	61.046	0.63057	61.046	60.573	61.203	0	-0.088381	0.00025362	NaN	2.2828	43	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1514000	+		31345	13247	15536	15598							0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	397.220735	1188.64038	2.1672	0.00086087	2.1399	0.00085002	4.3072	0.0017109	397.2219177170677	61.125	0.46877	61.454	61.173	61.641	0.32974	-0.18102	-0.0010439	NaN	2.2828	35	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1048800	+		31346	13247	15536	15598							0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	397.220735	1188.64038	1.9834	0.00078786	3.4493	0.0013701	5.4327	0.002158	397.22240541276744	59.762	0.43169	61.181	60.958	61.39	1.4196	0.046677	0.00028964	NaN	2.2828	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1137000	+		31347	13247	15536	15598							0.05360229354118928
SKWPYKPQR	9	Unmodified	_SKWPYKPQR_					0	0	0			REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	REV__ENST00000467573.1_1_21:40499576-40499963:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	397.220735	1188.64038	2.443	0.00097043	2.8378	0.0011272	5.2809	0.0020977	397.22201285806614	59.207	0.43575	61.176	60.94	61.376	1.969	0.041705	-0.00043904	NaN	2.2828	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1247800	+		31348	13247	15536	15598							0.05360229354118928
SLAAVITLC	9	Unmodified	_SLAAVITLC_					0	0	0		nc|ENSG00000101892|Q9UN42-2|ATP1B4;ENSG00000101892|ENST00000218008|ATP1B4	nc|ENSG00000101892|Q9UN42-2|ATP1B4	nc|ENSG00000101892|Q9UN42-2|ATP1B4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	890.5037719607353	1	890.501566	889.494289	2.3146	0.0020612	-0.53594	-0.00047725	1.7787	0.0015839	890.5016079131093	63.348	0.3825	65.293	65.091	65.473	1.9444					19	11	2	0	0	0	0.059546	1	26618	26618		64.236	3.8468	1	1150300			31349	1369	15537	15599	36134	36134					0.04512210793882332
SLADIVLWGA	10	Unmodified	_SLADIVLWGA_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000553162.5_1_12:57881873-57883795:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.7908203005791	2	522.78985	1043.56515	2.5688	0.0013429	0.74158	0.00038769	3.3103	0.0017306	522.7903837551063	89.603	0.37623	89.603	89.464	89.84	0					19	11	2	0	0	0	0.5476	1	37435	37435		25.399	9.5521	1	1942100			31350	3940	15538	15600	36135	36135					0.04510627103036313
SLADIVLWGA	10	Unmodified	_SLADIVLWGA_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000553162.5_1_12:57881873-57883795:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1044.577685534954	1	1044.57242	1043.56515	2.3878	0.0024943	2.2515	0.0023519	4.6394	0.0048461	1044.5751647455693	89.657	0.34512	89.657	89.464	89.809	0					17	10	2	0	0	0	0.059378	2	37498	37448;37498		74.929	26.583	1	1557000			31351	3940	15538	15600	36136;36137	36137					0.04510627103036313
SLADIVLWGA	10	Unmodified	_SLADIVLWGA_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000553162.5_1_12:57881873-57883795:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7914916872978	2	522.78985	1043.56515	2.7896	0.0014584	-0.21318	-0.00011145	2.5765	0.0013469	522.7902334416059	89.245	0.38498	89.468	89.327	89.712	0.2236					26	11	3	0	0	0	0.28892	2	37391	37391;37443		39.957	18.211	1	1094100			31352	3940	15538	15600	36138;36139	36138					0.04510627103036313
SLADIVLWGA	10	Unmodified	_SLADIVLWGA_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000553162.5_1_12:57881873-57883795:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1044.581103503704	1	1044.57242	1043.56515	5.5918	0.005841	0.21954	0.00022932	5.8113	0.0060703	1044.5728011397068	88.496	0.41889	89.553	89.369	89.788	1.0562					28	12	3	0	0	0	0.051733	3	37286	37286;37336;37376		108	47.607	1	7269200			31353	3940	15538	15600	36140;36141;36142	36140					0.04510627103036313
SLADIVLWGA	10	Unmodified	_SLADIVLWGA_					0	0	0		ENSG00000166986|ENST00000262027|MARS1;nc|ENSG00000166986|P56192-2|MARS1;ENST00000553162.5_1_12:57881873-57883795:+|nuORF	ENSG00000166986|ENST00000262027|MARS1	ENSG00000166986|ENST00000262027|MARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1044.581713855267	1	1044.57242	1043.56515	5.7459	0.006002	-0.68026	-0.00071059	5.0656	0.0052914	1044.5733854535656	88.124	0.41367	89.571	89.411	89.825	1.4467					26	12	3	0	0	0	0.059378	3	37118	37118;37165;37204		96.285	35.895	1	6250500			31354	3940	15538	15600	36143;36144;36145	36143					0.04510627103036313
SLADVHIEV	9	Unmodified	_SLADVHIEV_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7647888064384	2	491.763832	981.513111	1.8122	0.00089115	0.49413	0.000243	2.3063	0.0011341	491.76393078837253	48.954	0.34666	48.954	48.778	49.125	0					26	10	3	0	0	0	0.077188	2	20456	20407;20456		71.922	25.901	1	3167800			31355	1188	15539	15601	36146;36147	36147					0.02161463689287757
SLADVHIEV	9	Unmodified	_SLADVHIEV_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7643920779228	2	491.763832	981.513111	2.2141	0.0010888	-1.3345	-0.00065625	0.87964	0.00043258	491.76314626086736	47.137	0.44467	48.52	48.251	48.695	1.3825					40	13	4	0	0	0	0.071837	3	19716	19667;19716;19755		65.235	26.373	1	13529000			31356	1188	15539	15601	36148;36149;36150	36149					0.02161463689287757
SLADVHIEV	9	Unmodified	_SLADVHIEV_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7641479372978	2	491.763832	981.513111	2.0175	0.00099214	-0.94067	-0.00046259	1.0768	0.00052955	491.76323079829604	46.661	0.39184	48.632	48.41	48.802	1.9703					34	12	3	0	0	0	0.087723	2	19524	19479;19524		68.081	28.123	1	10532000			31357	1188	15539	15601	36151;36152	36152					0.02161463689287757
SLADVHIEV	9	Unmodified	_SLADVHIEV_					0	0	0		ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	ENSG00000095564|ENST00000265990|BTAF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	491.763832	981.513111	2.4228	0.0011914	0.011036	5.4272E-06	2.4338	0.0011968	491.7640330153566	48.499	0.30941	48.829	48.698	49.007	0.33034	0.095416	0.00050026	NaN	65.235	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2942200			31358	1188	15539	15601							0.02161463689287757
SLADVIIHEI	10	Unmodified	_SLADVIIHEI_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000471105.5_1_1:201965436-201974841:+|nuORF;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3158447146416	2	555.313689	1108.61282	2.4551	0.0013634	0.014684	8.1543E-06	2.4698	0.0013715	555.3135022362504	77.279	0.34993	78.559	78.378	78.728	1.2809					24	10	3	0	0	0	0.067551	1	32457	32457		107.19	58.841	1	1782400			31359	4406;7783	15540	15602	36153	36153					0.062862813032325
SLADVIIHEI	10	Unmodified	_SLADVIIHEI_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000471105.5_1_1:201965436-201974841:+|nuORF;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3149291872978	2	555.313689	1108.61282	2.0669	0.0011478	-0.18734	-0.00010403	1.8795	0.0010437	555.3133164625344	76.76	0.35028	78.527	78.353	78.704	1.7672					22	10	3	0	0	0	0.12205	1	32195	32195		60.074	29.437	1	1741600			31360	4406;7783	15540	15602	36154	36154					0.062862813032325
SLADVIIHEI	10	Unmodified	_SLADVIIHEI_					0	0	0		ENSG00000176393|ENST00000295640|RNPEP;SERPINB1-RNPEP|1|fusion;ENST00000471105.5_1_1:201965436-201974841:+|nuORF;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP;LGR6-RNPEP|1|fusion	ENSG00000176393|ENST00000295640|RNPEP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	555.313689	1108.61282	1.2743	0.00070765	0.07776	4.3181E-05	1.3521	0.00075083	555.3134931887695	78.762	0.31346	78.762	78.535	78.848	0	0.14563	0.00014901	NaN	107.19	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	635490			31361	4406;7783	15540	15602							0.062862813032325
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.2668029665947	2	497.266207	992.517862	1.5274	0.00075955	0.097485	4.8476E-05	1.6249	0.00080802	497.2663795327126	78.111	0.37733	78.111	77.937	78.314	0					28	11	3	0	0	0	0.045797	2	32560	32509;32560		71.134	26.727	1	3106500			31362	4829	15541	15603	36155;36156	36156					0.02130347832053303
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.2670165896416	2	497.266207	992.517862	2.539	0.0012625	-0.73263	-0.00036431	1.8063	0.00089822	497.265815145646	77.754	0.40955	78.071	77.857	78.266	0.31653					31	12	3	0	0	0	0.057024	2	32520	32467;32520		65.235	29.052	1	1996600			31363	4829	15541	15603	36157;36158	36158					0.02130347832053303
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2677184939384	2	497.266207	992.517862	2.5594	0.0012727	-0.090784	-4.5144E-05	2.4687	0.0012276	497.2661364009524	76.766	0.53154	78.06	77.762	78.294	1.2938					51	16	4	0	0	0	0.023786	4	32191	32144;32191;32241;32284		96.285	33.712	1	13096000			31364	4829	15541	15603	36159;36160;36161;36162	36160					0.02130347832053303
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	993.5283691287041	1	993.525138	992.517862	3.9087	0.0038834	-1.0458	-0.001039	2.863	0.0028444	993.523769315343	76.736	0.34187	78.03	77.857	78.199	1.2938					24	10	3	0	0	0	0.026734	2	32233	32184;32233		92.653	31.296	1	3634800			31365	4829	15541	15603	36163;36164	36164					0.02130347832053303
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2671996951103	2	497.266207	992.517862	2.6725	0.001329	-0.56309	-0.00028001	2.1094	0.001049	497.2658939278527	76.232	0.50258	77.999	77.72	78.222	1.7672					46	15	4	0	0	0	0.019432	3	31967	31924;31967;32022		99.799	38.441	1	8084300			31366	4829	15541	15603	36165;36166;36167	36166					0.02130347832053303
SLAEFVQSL	9	Unmodified	_SLAEFVQSL_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7;ENST00000567329.1_1_16:8996189-8998378:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	993.5306884646416	1	993.525138	992.517862	3.2561	0.003235	-0.67539	-0.00067101	2.5807	0.002564	993.5243851416001	76.25	0.37706	78.017	77.782	78.159	1.7672					20	11	2	0	0	0	0.029061	2	31993	31936;31993		88.954	27.596	1	3164100			31367	4829	15541	15603	36168;36169	36169					0.02130347832053303
SLAEHDLLL	9	Unmodified	_SLAEHDLLL_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7815734744072	2	505.779482	1009.54441	2.8396	0.0014362	0.76943	0.00038916	3.609	0.0018254	505.78001219178566	76.743	0.43757	78.037	77.825	78.262	1.2938					25	13	3	0	0	0	0.46905	1	32206	32206		16.942	0	1	2429700	+		31368	8861	15542	15604	36170	36170					0.04002036723386482
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2861511111259	2	479.2844	956.554247	2.5188	0.0012072	-0.32255	-0.00015459	2.1962	0.0010526	479.2843350926189	90.666	0.25363	90.666	90.558	90.812	0					11	7	2	0	0	0	0.11478	1	37895	37895		44.407	14.182	1	1501100			31369	2457	15543	15605	36171	36171					0.0742322472875685
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2841369509697	2	479.2844	956.554247	3.4376	0.0016476	-2.0988	-0.0010059	1.3388	0.00064166	479.2833105175812	90.188	0.28061	90.397	90.275	90.556	0.20904					15	8	2	0	0	0	0.069258	1	37820	37820		60.39	15.983	1	977560			31370	2457	15543	15605	36172	36172					0.0742322472875685
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2845031619072	2	479.2844	956.554247	5.3957	0.0025861	-2.1604	-0.0010354	3.2353	0.0015506	479.2828921386758	89.451	0.40859	90.47	90.268	90.676	1.0199					21	12	2	0	0	0	0.051699	2	37707	37653;37707		67.344	22.937	1	1130700			31371	2457	15543	15605	36173;36174	36174					0.0742322472875685
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	957.5600463747978	1	957.561524	956.554247	4.5315	0.0043392	1.0825	0.0010366	5.614	0.0053758	957.5622017983079	89.425	0.37867	90.445	90.268	90.646	1.0199					18	11	2	0	0	0	0.026836	1	37670	37670		92.491	0	1	1761200			31372	2457	15543	15605	36175	36175					0.0742322472875685
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2857238650322	2	479.2844	956.554247	4.6579	0.0022324	-2.0563	-0.00098554	2.6016	0.0012469	479.28327345691986	88.978	0.35003	90.425	90.275	90.625	1.4467					25	10	3	0	0	0	0.11478	1	37483	37483		44.407	14.182	1	1227500			31373	2457	15543	15605	36176	36176					0.0742322472875685
SLAELIQAL	9	Unmodified	_SLAELIQAL_					0	0	0		ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	ENSG00000130766|ENST00000253063|SESN2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	957.561524	956.554247	2.6559	0.0025432	-0.63146	-0.00060466	2.0245	0.0019386	957.5609229939075	90.242	0.18289	90.451	90.404	90.586	0.20904	0.0030991	-0.0012831	NaN	92.491	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	651690			31374	2457	15543	15605							0.0742322472875685
SLAELVHAV	9	Unmodified	_SLAELVHAV_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.7700378298759	2	469.768917	937.523281	2.398	0.0011265	-0.93875	-0.000441	1.4593	0.00068553	469.7684852410896	53.09	0.49475	53.09	52.821	53.316	0					50	17	4	0	0	0	0.0068741	4	22153	22069;22115;22153;22191		114.94	36.959	1	29198000			31375	1003	15544	15606	36177;36178;36179;36180	36179					0.0520207141452147
SLAELVHAV	9	Unmodified	_SLAELVHAV_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.7711059451103	2	469.768917	937.523281	2.4313	0.0011422	0.79318	0.00037261	3.2245	0.0015148	469.7692652988858	52.51	0.51965	52.836	52.559	53.078	0.32554					47	17	4	0	0	0	0.028763	4	21982	21934;21982;22021;22067		89.427	22.083	1	27545000			31376	1003	15544	15606	36181;36182;36183;36184	36182					0.0520207141452147
SLAELVHAV	9	Unmodified	_SLAELVHAV_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.7706481814384	2	469.768917	937.523281	0.81577	0.00038322	2.2116	0.0010389	3.0274	0.0014222	469.7700204557733	51.167	0.66096	52.561	52.287	52.948	1.3938					67	21	5	0	0	0	0.0068741	4	21430	21344;21391;21430;21469		114.94	36.959	1	107470000			31377	1003	15544	15606	36185;36186;36187;36188	36187					0.0520207141452147
SLAELVHAV	9	Unmodified	_SLAELVHAV_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.7692443728447	2	469.768917	937.523281	1.0044	0.00047185	1.3612	0.00063945	2.3656	0.0011113	469.76959709352536	50.585	0.66503	52.56	52.277	52.942	1.9753					63	21	5	0	0	0	0.01705	6	21157	21114;21157;21196;21235;21277;21343		101.72	34.378	1	113670000			31378	1003	15544	15606	36189;36190;36191;36192;36193;36194	36190					0.0520207141452147
SLAELVHAVV	10	Unmodified	_SLAELVHAVV_					0	0	0		nc|ENSG00000080546|Q9Y6P5-3|SESN1;nc|ENSG00000080546|Q9Y6P5|SESN1;ENSG00000080546|ENST00000436639|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	nc|ENSG00000080546|Q9Y6P5-3|SESN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.3036987185478	2	519.303124	1036.5917	2.326	0.0012079	-0.23657	-0.00012285	2.0894	0.001085	519.3029532621325	65.953	0.39375	67.352	67.094	67.488	1.3989					26	12	3	0	0	0	0.059378	2	27667	27623;27667		74.929	33.089	1	5602500			31379	1003	15545	15607	36195;36196	36196					0.07486315994378856
SLAENHDPEG	10	Unmodified	_SLAENHDPEG_					0	0	0			REV__ENSG00000100038|ENST00000357179|TOP3B	REV__ENSG00000100038|ENST00000357179|TOP3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	534.7335693240166	2	534.73326	1067.45197	1.7104	0.0009146	-1.4592	-0.00078027	0.2512	0.00013433	534.7326999056066	65.909	0.51151	65.909	65.612	66.123	0					64	15	6	0	0	0	0.86043	1	27406	27406		5.7319	0.83484	1	9027600	+		31380	8964	15546	15608	36197	36197					-0.07906093080805476
SLAERLFFQV	10	Unmodified	_SLAERLFFQV_					0	0	0		ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.3356811404228	2	605.334956	1208.65536	1.1313	0.00068483	-0.90116	-0.0005455	0.23016	0.00013932	605.3341907699277	70.147	0.35912	70.469	70.288	70.647	0.32224					19	11	2	0	0	0	0.1278	1	29364	29364		59.052	27.784	1	1436900			31381	4761	15547	15609	36198	36198					0.059376764314720276
SLAERLFFQV	10	Unmodified	_SLAERLFFQV_					0	0	0		ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3367797732353	2	605.334956	1208.65536	1.9782	0.0011975	-1.8189	-0.0011011	0.15929	9.6427E-05	605.3346236646682	68.984	0.49815	70.35	70.06	70.558	1.3657					23	15	2	0	0	0	0.055952	1	28943	28943		91.085	27.124	1	2706600			31382	4761	15547	15609	36199	36199					0.059376764314720276
SLAERLFFQV	10	Unmodified	_SLAERLFFQV_					0	0	0		ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.3356201052666	2	605.334956	1208.65536	1.991	0.0012052	-3.8287	-0.0023176	-1.8377	-0.0011124	605.3345261412306	68.381	0.35277	70.251	70.042	70.395	1.87					24	10	3	0	0	0	0.04309	1	28683	28683		81.915	26.412	1	2333500			31383	4761	15547	15609	36200	36200					0.059376764314720276
SLAERLFFQV	10	Unmodified	_SLAERLFFQV_					0	0	0		ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	ENSG00000185818|ENST00000423729|NAT8L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	605.334956	1208.65536	1.9524	0.0011818	-0.95224	-0.00057642	1.0001	0.00060542	605.8363077574844	70.719	0.34336	70.719	70.596	70.94	0	0.2716	0.00056063	NaN	81.915	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	882800			31384	4761	15547	15609							0.059376764314720276
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7883178591728	2	500.787307	999.560061	1.673	0.00083783	-0.21771	-0.00010902	1.4553	0.00072881	500.78709634467754	78.624	0.67635	78.624	78.409	79.085	0					35	21	2	0	0	0	0.029093	3	32740	32703;32740;32779		88.904	27.546	1	8385400			31385	664	15548	15610	36201;36202;36203	36202					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1000.569811999798	1	1000.56734	999.560061	1.7602	0.0017612	0.14676	0.00014685	1.907	0.001908	1000.567820793177	78.677	0.31239	78.677	78.474	78.787	0					21	9	3	0	0	0	0.00032761	2	32755	32709;32755		136.33	32.585	1	1774100			31386	664	15548	15610	36204;36205	36205					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7883788943291	2	500.787307	999.560061	2.3792	0.0011915	-0.050411	-2.5245E-05	2.3288	0.0011662	500.7871403479917	78.254	0.478	78.563	78.323	78.801	0.30933					25	14	2	0	0	0	0.029093	3	32708	32660;32708;32748		88.904	17.77	1	10745000			31387	664	15548	15610	36206;36207;36208	36207					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1000.570178210735	1	1000.56734	999.560061	2.0161	0.0020173	0.1989	0.00019901	2.215	0.0022163	1000.5678645131609	78.236	0.31855	78.545	78.355	78.674	0.30933					20	9	3	0	0	0	5.2553E-05	2	32696	32696;32751		149.99	34.303	1	1744400			31388	664	15548	15610	36209;36210	36209					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7890502810478	2	500.787307	999.560061	2.5761	0.0012901	0.274	0.00013721	2.8501	0.0014273	500.7874735298533	77.275	0.50999	78.556	78.313	78.823	1.2809					42	15	4	0	0	0	0.007852	4	32435	32393;32435;32474;32514		111.29	27.546	1	20311000			31389	664	15548	15610	36211;36212;36213;36214	36212					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1000.572192370892	1	1000.56734	999.560061	3.2159	0.0032177	0.15137	0.00015146	3.3672	0.0033692	1000.5672367509721	77.335	0.38234	78.616	78.378	78.76	1.2809					25	11	3	0	0	0	2.8289E-05	2	32453	32404;32453		164.52	36.15	1	4833400			31390	664	15548	15610	36215;36216	36216					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7883178591728	2	500.787307	999.560061	1.8793	0.00094115	0.43884	0.00021977	2.3182	0.0011609	500.7875912743886	76.732	0.54623	78.499	78.255	78.801	1.7672					44	16	4	0	0	0	0.018723	3	32153	32153;32199;32238		100.37	25.442	1	17780000			31391	664	15548	15610	36217;36218;36219	36217					0.06026323240439524
SLAEVLQQL	9	Unmodified	_SLAEVLQQL_					0	0	0		ENST00000482694.1_1_2:85577073-85578124:-|nuORF;nc|ENSG00000042445|Q6NUM9-2|RETSAT;ENSG00000042445|ENST00000295802|RETSAT	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	ENST00000482694.1_1_2:85577073-85578124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1000.568774402142	1	1000.56734	999.560061	2.4308	0.0024322	0.099759	9.9816E-05	2.5305	0.002532	1000.5682430627829	76.779	0.35028	78.546	78.353	78.704	1.7672					23	10	3	0	0	0	2.0192E-05	1	32207	32207		172.91	36.573	1	3489700			31392	664	15548	15610	36220	36220					0.06026323240439524
SLAGDVALQQL	11	Unmodified	_SLAGDVALQQL_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.8078491091728	2	557.808771	1113.60299	1.4954	0.00083412	0.83832	0.00046762	2.3337	0.0013017	557.809777523207	59.177	0.50705	59.177	59.005	59.512	0					25	15	3	0	0	0	0.069099	2	24661	24661;24710		62.573	24.599	1	2044300			31393	549	15549	15611	36221;36222	36221					0.05073093297869491
SLAGDVALQQL	11	Unmodified	_SLAGDVALQQL_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.8104125857353	2	557.808771	1113.60299	2.4311	0.0013561	0.30463	0.00016992	2.7357	0.001526	557.8089441677555	58.775	0.2882	59.101	58.96	59.248	0.32553					19	9	3	0	0	0	0.2718	2	24652	24604;24652		34.402	7.5181	1	2226100			31394	549	15549	15611	36223;36224	36224					0.05073093297869491
SLAGDVALQQL	11	Unmodified	_SLAGDVALQQL_					0	0	0		ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	ENSG00000010292|ENST00000315579|NCAPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8102905154228	2	557.808771	1113.60299	0.41559	0.00023182	0.093054	5.1906E-05	0.50864	0.00028373	557.8088104822616	57.615	0.18337	59.033	58.973	59.156	1.4181					20	15	2	0	0	0	0.041084	1	24157	24157		69.105	34.703	1	5014100			31395	549	15549	15611	36225	36225					0.05073093297869491
SLAGGIIGV	9	Unmodified	_SLAGGIIGV_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;HNRNPK|p.Y280Mfs*4|1|0.05|ENSG00000165119|chr9:83971997-83971997|A/-|frameshift_variant;nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	786.4747192263603	1	786.47198	785.464704	2.0632	0.0016227	0.60859	0.00047864	2.6718	0.0021013	786.4724084653325	58.736	0.54391	58.736	58.493	59.037	0					49	16	4	0	0	0	0.0068741	3	24498	24498;24536;24577		114.94	14.572	1	35287000			31396	7914	15550	15612	36226;36227;36228	36226					0.0633901484004582
SLAGGIIGV	9	Unmodified	_SLAGGIIGV_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;HNRNPK|p.Y280Mfs*4|1|0.05|ENSG00000165119|chr9:83971997-83971997|A/-|frameshift_variant;nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	786.4740478396416	1	786.47198	785.464704	2.4396	0.0019187	0.30964	0.00024352	2.7492	0.0021622	786.4721936319205	58.343	0.50713	58.666	58.396	58.903	0.32298					46	15	4	0	0	0	0.00029988	4	24416	24370;24416;24455;24494		137.59	22.641	1	38291000			31397	7914	15550	15612	36229;36230;36231;36232	36230					0.0633901484004582
SLAGGIIGV	9	Unmodified	_SLAGGIIGV_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;HNRNPK|p.Y280Mfs*4|1|0.05|ENSG00000165119|chr9:83971997-83971997|A/-|frameshift_variant;nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	786.4720336794853	1	786.47198	785.464704	0.81636	0.00064205	-0.31451	-0.00024735	0.50185	0.00039469	786.4717283805147	57.151	0.56993	58.565	58.276	58.846	1.4145					62	19	5	0	0	0	0.00029988	4	24021	23871;23918;23969;24021		137.59	22.641	1	175610000			31398	7914	15550	15612	36233;36234;36235;36236	36236					0.0633901484004582
SLAGGIIGV	9	Unmodified	_SLAGGIIGV_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;HNRNPK|p.Y280Mfs*4|1|0.05|ENSG00000165119|chr9:83971997-83971997|A/-|frameshift_variant;nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;ENST00000485383.1_1_3:96068520-96068997:+|nuORF	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	786.4722167849541	1	786.47198	785.464704	0.51549	0.00040542	0.33052	0.00025995	0.84601	0.00066537	786.4722416668702	56.592	0.62979	58.56	58.303	58.933	1.9684					59	20	4	0	0	0	0.0068741	4	23699	23661;23699;23750;23802		114.94	18.293	1	158540000			31399	7914	15550	15612	36237;36238;36239;36240	36238					0.0633901484004582
SLAGRFRGV	9	Unmodified	_SLAGRFRGV_					0	0	0			REV__ENST00000218340.3_1_X:46696377-46696494:+|nuORF	REV__ENST00000218340.3_1_X:46696377-46696494:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.7802307009697	2	481.780151	961.545748	2.3639	0.0011389	-0.84748	-0.0004083	1.5165	0.0007306	481.7796914286848	61.409	0.3482	61.409	61.203	61.552	0					21	10	3	0	0	0	0.70108	1	25551	25551		7.2892	0.56607	1	2927100	+		31400	12075	15551	15613	36241	36241					0.06343715602804423
SLAKANEPAN	10	Unmodified	_SLAKANEPAN_					0	0	0			REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.2141906619072	2	507.764363	1013.51417	2.4275	0.0012326	1.2269	0.00062297	3.6544	0.0018556	507.7650478322368	63.722	0.34814	65.129	64.988	65.336	1.4071					15	10	2	0	0	0	0.12372	1	26761	26761		26.268	9.1552	1	1005500	+		31401	14888	15552	15614	36242	36242					0.007956780581821477
SLAKANEPAN	10	Unmodified	_SLAKANEPAN_					0	0	0			REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7661315798759	2	507.764363	1013.51417	2.3946	0.0012159	1.955	0.00099268	4.3496	0.0022086	507.7650951721649	63.19	0.31401	65.135	64.965	65.279	1.9444					20	9	3	0	0	0	0.31869	1	26541	26541		38.176	2.0485	1	1275400	+		31402	14888	15552	15614	36243	36243					0.007956780581821477
SLAKANEPAN	10	Unmodified	_SLAKANEPAN_					0	0	0			REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	REV__tr|A0A553SJ87|A0A553SJ87_NIACISugarABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16375PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.764363	1013.51417	2.3946	0.0012159	1.955	0.00099268	4.3496	0.0022086	507.7650951721649	63.19	0.31401	65.135	64.965	65.279	1.9444	0.0030028	0.00035953	NaN	45.7	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1275400	+		31403	14888	15552	15614							0.007956780581821477
SLALNLLYI	9	Unmodified	_SLALNLLYI_					0	0	0			REV__ENSG00000168329|ENST00000399220|CX3CR1	REV__ENSG00000168329|ENST00000399220|CX3CR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8060485720634	2	510.310418	1018.60628	1.9542	0.00099724	-1.7233	-0.00087944	0.23085	0.0001178	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.77526	1	27811	27811		4.3292	0	1	98417000	+		31404	10905	15553	15615	36244	36244					0.09772388142516775
SLAPLFFKL	9	Unmodified	_SLAPLFFKL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3190795779228	2	518.315503	1034.61645	2.9695	0.0015391	2.4187	0.0012537	5.3882	0.0027928	518.3174528171999	79.306	0.46918	80.572	80.253	80.723	1.2668					39	14	4	0	0	0	0.17276	1	33287	33287		36.127	10.728	1	3534100			31405	779	15554	15616	36245	36245					0.10052995867749814
SLAPLFFKL	9	Unmodified	_SLAPLFFKL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3179199099541	2	518.315503	1034.61645	2.3572	0.0012218	1.6817	0.00087166	4.0389	0.0020934	518.316495517584	78.743	0.46507	80.478	80.165	80.63	1.735					39	14	4	0	0	0	0.15456	1	33020	33020		38.176	9.6887	1	3752000			31406	779	15554	15616	36246	36246					0.10052995867749814
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.7750121951103	2	496.7742	991.533846	1.5423	0.00076615	0.12888	6.4026E-05	1.6711	0.00083018	496.77422630883706	65.333	0.40973	65.333	65.104	65.513	0					29	12	3	0	0	0	0.031377	3	27236	27186;27236;27290		85.272	21.036	1	3509400			31407	4096	15555	15617	36247;36248;36249	36248					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	992.5464355349541	1	992.541123	991.533846	1.8053	0.0017918	0.68656	0.00068144	2.4918	0.0024732	992.5418854873692	65.274	0.28331	65.274	65.166	65.449	0					14	8	2	0	0	0	0.070055	2	27200	27200;27249		60.074	11.959	1	894250			31408	4096	15555	15617	36250;36251	36250					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.7751953005791	2	496.7742	991.533846	2.5456	0.0012646	-0.29758	-0.00014783	2.248	0.0011167	496.7740752357431	64.865	0.40885	65.192	64.947	65.356	0.32689					30	12	3	0	0	0	0.04145	3	27166	27120;27166;27208		74.929	18.203	1	4399200			31409	4096	15555	15617	36252;36253;36254	36253					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	992.5463134646416	1	992.541123	991.533846	2.0761	0.0020606	0.85281	0.00084645	2.9289	0.0029071	992.5424954691001	64.829	0.28526	65.156	65.038	65.323	0.32689					19	8	3	0	0	0	0.04812	2	27136	27136;27183		69.105	10.426	1	915350			31410	4096	15555	15617	36255;36256	36255					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7755004763603	2	496.7742	991.533846	2.0925	0.0010395	0.51567	0.00025617	2.6082	0.0012957	496.7745228009008	63.741	0.50069	65.148	64.9	65.401	1.4071					52	15	5	0	0	0	0.037098	3	26768	26682;26730;26768		78.728	16.155	1	14175000			31411	4096	15555	15617	36257;36258;36259	36259					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	992.5442993044853	1	992.541123	991.533846	3.5264	0.0035001	-0.88624	-0.00087963	2.6402	0.0026205	992.5409446666936	63.751	0.37502	65.158	64.93	65.305	1.4071					26	11	3	0	0	0	0.029061	2	26774	26718;26774		88.954	20.873	1	3007800			31412	4096	15555	15617	36260;36261	36261					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7753173708916	2	496.7742	991.533846	2.2255	0.0011056	0.21661	0.00010761	2.4421	0.0012132	496.7743612441021	63.192	0.50158	65.137	64.875	65.377	1.9444					53	15	5	0	0	0	0.029061	3	26558	26475;26518;26558		88.954	20.155	1	16576000			31413	4096	15555	15617	36262;36263;36264	36264					0.037740540689469526
SLAQYLINA	9	Unmodified	_SLAQYLINA_					0	0	0		nc|ENSG00000183570|P57721-2|PCBP3;nc|ENSG00000183570|P57721-3|PCBP3;nc|ENSG00000183570|P57721-5|PCBP3;ENSG00000169564|ENST00000303577|PCBP1;nc|ENSG00000183570|P57721-4|PCBP3;ENSG00000183570|ENST00000681687|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	nc|ENSG00000183570|P57721-2|PCBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	992.5437499880791	1	992.541123	991.533846	2.8002	0.0027793	0.15876	0.00015758	2.9589	0.0029368	992.5418091212824	63.192	0.3785	65.137	64.934	65.312	1.9444					24	11	3	0	0	0	0.037098	2	26497	26497;26549		78.728	20.049	1	2705100			31414	4096	15555	15617	36265;36266	36265					0.037740540689469526
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.7908203005791	2	510.78985	1019.56515	2.0741	0.0010594	-0.026359	-1.3464E-05	2.0477	0.0010459	510.7899235681848	76.027	0.56098	76.027	75.755	76.316	0					63	17	5	0	0	0	0.019432	4	31634	31593;31634;31673;31712		99.799	36.686	1	74524000			31415	4980	15556	15618	36267;36268;36269;36270	36268					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1020.574877917767	1	1020.57242	1019.56515	1.8592	0.0018974	-0.241	-0.00024595	1.6182	0.0016515	1020.5723271236284	76.089	0.40252	76.089	75.852	76.254	0					35	12	4	0	0	0	0.007852	3	31661	31613;31661;31700		111.29	52.608	1	10155000			31416	4980	15556	15618	36271;36272;36273	36272					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.7915527224541	2	510.78985	1019.56515	2.5692	0.0013123	0.080965	4.1356E-05	2.6502	0.0013537	510.78995928768774	75.559	0.59386	75.88	75.646	76.24	0.32163					69	18	5	0	0	0	0.031377	5	31693	31533;31575;31614;31653;31693		85.272	36.926	1	73273000			31417	4980	15556	15618	36274;36275;36276;36277;36278	36278					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1020.574450671673	1	1020.57242	1019.56515	2.7711	0.0028281	-0.51723	-0.00052787	2.2539	0.0023003	1020.5720572295772	75.618	0.43423	75.94	75.678	76.112	0.32163					39	13	4	0	0	0	0.007852	4	31591	31547;31591;31641;31685		111.29	49.93	1	10038000			31418	4980	15556	15618	36279;36280;36281;36282	36280					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7917663455009	2	510.78985	1019.56515	3.5963	0.0018369	-0.079472	-4.0593E-05	3.5168	0.0017963	510.7900855445484	74.541	0.51058	75.853	75.585	76.095	1.3119					67	16	5	0	0	0	0.019432	5	31291	31205;31252;31291;31330;31370		99.799	35.563	1	154010000			31419	4980	15556	15618	36283;36284;36285;36286;36287	36285					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1020.572924792767	1	1020.57242	1019.56515	2.6438	0.0026982	0.13264	0.00013537	2.7765	0.0028336	1020.5723497206734	74.555	0.48005	75.861	75.61	76.09	1.3063					44	15	4	0	0	0	0.019432	3	31236	31236;31280;31335		99.799	49.866	1	31566000			31420	4980	15556	15618	36288;36289;36290	36288					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7911254763603	2	510.78985	1019.56515	3.3316	0.0017018	0.22803	0.00011647	3.5597	0.0018182	510.7903568021082	74.144	0.51705	75.94	75.597	76.114	1.7962					64	16	5	0	0	0	0.007852	4	31042	30999;31042;31081;31133		111.29	40.153	1	183630000			31421	4980	15556	15618	36291;36292;36293;36294	36292					0.056146271030456774
SLAQYLINV	9	Unmodified	_SLAQYLINV_					0	0	0		ENST00000547048.5_1_12:53862529-53873223:+|nuORF;ENST00000517662.1_1_8:75515525-75516083:-|nuORF;nc|ENSG00000197111|Q15366-7|PCBP2;nc|ENSG00000197111|Q15366-8|PCBP2;nc|ENSG00000197111|Q15366-4|PCBP2;nc|ENSG00000197111|Q15366-5|PCBP2;nc|ENSG00000197111|Q15366-6|PCBP2;ENSG00000197111|ENST00000546463|PCBP2;nc|ENSG00000197111|Q15366|PCBP2;nc|ENSG00000197111|Q15366-2|PCBP2	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	ENST00000547048.5_1_12:53862529-53873223:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1020.574206531048	1	1020.57242	1019.56515	3.0382	0.0031007	-0.4842	-0.00049416	2.554	0.0026066	1020.5719500371301	74.057	0.48817	75.853	75.657	76.146	1.7962					37	15	3	0	0	0	0.0033884	4	31068	31023;31068;31121;31160		126.57	58.485	1	23575000			31422	4980	15556	15618	36295;36296;36297;36298	36296					0.056146271030456774
SLARIFSIL	9	Unmodified	_SLARIFSIL_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3182556033134	2	510.316035	1018.61752	2.8634	0.0014612	2.6819	0.0013686	5.5453	0.0028298	510.3176666709897	77.262	0.2854	78.543	78.346	78.631	1.2809					18	8	3	0	0	0	0.18337	1	32407	32407		34.932	6.4452	1	1629800			31423	3812	15557	15619	36299	36299					0.10895210236662933
SLARIFSIL	9	Unmodified	_SLARIFSIL_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	510.316035	1018.61752	2.6327	0.0013435	1.0234	0.00052225	3.6561	0.0018658	510.3169750549864	76.65	0.25839	78.417	78.255	78.514	1.7672	-0.062676	-0.00097181	NaN	34.932	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1120100			31424	3812	15557	15619							0.10895210236662933
SLARSCDASA	10	Unmodified	_SLARSCDASA_					0	0	0			REV__ENST00000565298.5_1_16:1574507-1576156:-|nuORF	REV__ENST00000565298.5_1_16:1574507-1576156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.7270385622978	2	490.726923	979.439294	1.1771	0.00057765	-2.4019	-0.0011787	-1.2248	-0.00060104	490.726435166149	38.299	0.37643	40.135	39.99	40.367	1.8366					25	11	3	0	0	0	0.60754	1	16075	16075		22.658	1.1211	1	1228100	+		31425	8424	15558	15620	36300	36300					-0.05124827744691629
SLASLLAKV	9	Unmodified	_SLASLLAKV_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.2909118533134	2	451.289485	900.564418	1.7279	0.00077978	0.19283	8.7022E-05	1.9207	0.0008668	451.28951339749483	65.401	0.28813	65.401	65.258	65.546	0					13	8	2	0	0	0	0.1109	1	27268	27268		45.7	11.298	1	819210			31426	1934	15559	15621	36301	36301					0.11015832453995245
SLASLLAKV	9	Unmodified	_SLASLLAKV_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.2910034060478	2	451.289485	900.564418	2.4694	0.0011144	1.9187	0.00086587	4.388	0.0019803	451.2903417822167	64.757	0.34338	65.084	64.947	65.29	0.32689					16	10	2	0	0	0	0.086433	1	27134	27134		53.833	11.993	1	775530			31427	1934	15559	15621	36302	36302					0.11015832453995245
SLASLLAKV	9	Unmodified	_SLASLLAKV_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2917663455009	2	451.289485	900.564418	2.4996	0.0011281	0.57863	0.00026113	3.0783	0.0013892	451.2898907074412	63.562	0.42734	64.976	64.753	65.18	1.4134					31	13	3	0	0	0	0.079895	2	26632	26632;26683		56.177	12.319	1	3620300			31428	1934	15559	15621	36303;36304	36303					0.11015832453995245
SLASLLAKV	9	Unmodified	_SLASLLAKV_					0	0	0		ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	ENSG00000115760|ENST00000421745|BIRC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2903625369072	2	451.289485	900.564418	2.5202	0.0011373	0.61342	0.00027683	3.1336	0.0014142	451.28971591785734	62.915	0.40047	64.86	64.658	65.058	1.9444					29	12	3	0	0	0	0.063746	2	26396	26396;26448		62.573	12.64	1	3231900			31429	1934	15559	15621	36305;36306	36305					0.11015832453995245
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	888.5411254763603	1	888.54006	887.532783	2.1717	0.0019297	-1.0576	-0.00093976	1.1141	0.00098993	888.5392023784711	83.241	0.42889	83.241	83.014	83.443	0					35	13	3	0	0	0	0.0075027	2	34664	34619;34664		112.59	19.771	1	7342000			31430	6669	15560	15622	36307;36308	36308					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1207458376884	2	444.773668	887.532783	1.9809	0.00088105	-0.86033	-0.00038265	1.1206	0.0004984	444.773070771426	83.273	0.33582	83.273	83.076	83.412	0					13	10	2	0	0	0	0.097511	1	34649	34649		16.942	5.302	1	1998800			31431	6669	15560	15622	36309	36309					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	888.5413085818291	1	888.54006	887.532783	2.3053	0.0020483	-0.39007	-0.0003466	1.9152	0.0017017	888.5399246971641	82.715	0.39688	82.985	82.787	83.183	0.27029					33	12	3	0	0	0	0.018723	2	34593	34544;34593		100.37	18.758	1	9051700			31432	6669	15560	15622	36310;36311	36311					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1209594607353	2	444.773668	887.532783	2.746	0.0012214	-0.39292	-0.00017476	2.3531	0.0010466	444.77333488719177	82.745	0.304	83.016	82.817	83.121	0.27029					14	9	2	0	0	0	0.040432	1	34594	34594		50.855	8.7605	1	2788400			31433	6669	15560	15622	36312	36312					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	888.5411865115166	1	888.54006	887.532783	3.4754	0.0030881	-1.0454	-0.00092891	2.43	0.0021592	888.539006454754	81.719	0.49486	82.952	82.749	83.244	1.2332					45	15	4	0	0	0	0.0075027	3	34362	34260;34309;34362		112.59	19.771	1	22946000			31434	6669	15560	15622	36313;36314;36315	36315					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1208373904228	2	444.773668	887.532783	3.8802	0.0017258	-1.1742	-0.00052227	2.7059	0.0012035	444.77281201492065	81.755	0.46416	82.988	82.749	83.213	1.2332					32	14	3	0	0	0	0.040432	1	34356	34356		50.855	8.7605	1	2032900			31435	6669	15560	15622	36316	36316					0.08451839700057917
SLASLLVSV	9	Unmodified	_SLASLLVSV_					0	0	0		ENST00000461361.5_1_3:45016905-45052828:+|nuORF;ENSG00000075914|ENST00000265564|EXOSC7	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	ENST00000461361.5_1_3:45016905-45052828:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	888.5414916872978	1	888.54006	887.532783	3.1135	0.0027665	-0.21323	-0.00018947	2.9003	0.002577	888.5399209011438	81.242	0.49187	82.938	82.735	83.226	1.6959					37	15	3	0	0	0	0.018723	3	34085	34042;34085;34125		100.37	18.758	1	21839000			31436	6669	15560	15622	36317;36318;36319	36318					0.08451839700057917
SLASVLVLLL	10	Unmodified	_SLASVLVLLL_					0	0	0			REV__nc|ENSG00000269565|Q8NGA4|GPR32P1	REV__nc|ENSG00000269565|Q8NGA4|GPR32P1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.3420287966728	2	514.341718	1026.66888	3.1612	0.0016259	-1.5125	-0.00077796	1.6486	0.00084795	514.3409660435051	59.629	0.23735	61.598	61.466	61.703	1.969					12	7	2	0	0	0	0.24174	1	25034	25034		43.858	2.0187	1	1347200	+		31437	14560	15561	15623	36320	36320					0.15661534210721584
SLATTHPVPV	10	Unmodified	_SLATTHPVPV_					0	0	0			REV__nc|ENSG00000086062|P15291-2|B4GALT1	REV__nc|ENSG00000086062|P15291-2|B4GALT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.2879821658134	2	511.287474	1020.5604	1.8867	0.00096462	-2.7955	-0.0014293	-0.90881	-0.00046466	511.28622172473575	52.747	0.24564	53.07	52.894	53.14	0.32283					11	8	2	0	0	0	0.51515	1	22105	22105		26.884	0	1	937230	+		31438	8857	15562	15624	36321	36321					0.05093742960286818
SLAVLGGKLYV	11	Unmodified	_SLAVLGGKLYV_					0	0	0		ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3478881716728	2	560.342249	1118.66995	2.8181	0.0015791	2.5369	0.0014215	5.3551	0.0030007	560.3445944501175	60.264	0.24337	61.684	61.536	61.779	1.4196					14	7	2	0	0	0	0.46674	1	25281	25281		24.991	9.1438	1	907250			31439	3618	15563	15625	36322	36322					0.11535748579603933
SLAVLGGKLYV	11	Unmodified	_SLAVLGGKLYV_					0	0	0		ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	560.342249	1118.66995	1.9639	0.0011005	1.2691	0.00071114	3.233	0.0018116	560.3427757834503	61.398	0.18607	61.727	61.671	61.857	0.32974	0.027924	-0.00012696	NaN	24.991	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	277370			31440	3618	15563	15625							0.11535748579603933
SLAVLGGKLYV	11	Unmodified	_SLAVLGGKLYV_					0	0	0		ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	ENSG00000162413|ENST00000377658|KLHL21	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	560.342249	1118.66995	2.9015	0.0016258	0.70276	0.00039379	3.6043	0.0020196	560.3426966137993	59.719	0.18219	61.688	61.612	61.794	1.969	-0.011981	-0.00076167	NaN	24.991	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	706180			31441	3618	15563	15625							0.11535748579603933
SLAVSTKRDL	10	Unmodified	_SLAVSTKRDL_					0	0	0			REV__ENST00000467530.5_1_1:85960795-85960843:-|nuORF	REV__ENST00000467530.5_1_1:85960795-85960843:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3176757693291	2	545.316763	1088.61897	1.4657	0.00079927	0.69295	0.00037787	2.1587	0.0011771	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.85124	1	30051	30051		6.7232	6.7232	1	5427600	+		31442	13246	15564	15626	36323	36323					0.07820799534783873
SLAVTIQTV	9	Unmodified	_SLAVTIQTV_					0	0	0			REV__ENSG00000164180|ENST00000296595|TMEM161B	REV__ENSG00000164180|ENST00000296595|TMEM161B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.2780029177666	2	466.276575	930.538597	2.3061	0.0010753	1.4356	0.00066937	3.7417	0.0017446	466.27663778561816	68.067	0.46133	69.444	69.213	69.675	1.3778					28	14	3	0	0	0	0.13623	1	28557	28557		52.268	0	1	2448000	+		31443	10722	15565	15627	36324	36324					0.07054938211729223
SLAWSADGQT	10	Unmodified	_SLAWSADGQT_					0	0	0		ENSG00000204628|ENST00000512805|RACK1	ENSG00000204628|ENST00000512805|RACK1	ENSG00000204628|ENST00000512805|RACK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2419921755791	2	518.240721	1034.46689	2.8475	0.0014757	-2.2405	-0.0011611	0.60701	0.00031458	518.2397681704961	75.054	2.7506	76.836	76.195	78.945	1.7817					227	87	6	0	0	0	0.8325	1	31514	31514		8.7454	0.15213	1	7905300			31444	5156	15566	15628	36325	36325					-0.04896601212817586
SLCDEECH	8	Unmodified	_SLCDEECH_					0	0	0			REV__ENST00000261868.9_1_15:44853813-44853885:+|nuORF	REV__ENST00000261868.9_1_15:44853813-44853885:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	468.1655456423759	2	468.16531	934.316067	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.619	1	33.444	32.944	33.944	1.8246								0	0	0	1.0178	1	13256	13256		0.79363	0	1		+		31445	12187	15567	15629	36326	36326					-0.153718271874709
SLDAKEIYL	9	Unmodified	_SLDAKEIYL_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	526.6258422732353	2	526.28714	1050.55973	1.937	0.0010194	1.3685	0.00072024	3.3056	0.0017397	526.2882992585703	44.724	0.2387	45.051	44.927	45.166	0.32674					11	7	2	0	0	0	0.1132	1	18806	18806		22.736	9.2284	1	630550			31446	956	15568	15630	36327	36327					0.03646903520575506
SLDAKEIYL	9	Unmodified	_SLDAKEIYL_					0	0	0		ENSG00000077232|ENST00000264065|DNAJC10;nc|ENSG00000077232|Q8IXB1-2|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	ENSG00000077232|ENST00000264065|DNAJC10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.28714	1050.55973	2.041	0.0010742	1.4648	0.00077092	3.5058	0.0018451	526.2881169441649	43.167	0.18351	45.111	45.041	45.225	1.9438	-0.048254	0.000178	NaN	32.786	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	526910			31447	956	15568	15630							0.03646903520575506
SLDALLSQV	9	Unmodified	_SLDALLSQV_					0	0	0		ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8	ENSG00000159479|ENST00000372457|MED8	ENSG00000159479|ENST00000372457|MED8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	945.5281860232353	1	945.525138	944.517862	1.6274	0.0015387	1.2537	0.0011854	2.8811	0.0027241	945.5261044147773	72.167	0.25302	72.167	72.016	72.269	0					13	7	2	0	0	0	0.01454	1	30044	30044		103.75	3.3768	1	1000600			31448	3533	15569	15631	36328	36328					0.04338347832060663
SLDALLSQV	9	Unmodified	_SLDALLSQV_					0	0	0		ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8	ENSG00000159479|ENST00000372457|MED8	ENSG00000159479|ENST00000372457|MED8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2668640017509	2	473.266207	944.517862	2.2384	0.0010593	0.237	0.00011216	2.4754	0.0011715	473.2661592714974	72.126	0.28442	72.126	72.016	72.3	0					14	8	2	0	0	0	0.10993	1	30067	30067		46.021	11.919	1	1616600			31449	3533	15569	15631	36329	36329					0.04338347832060663
SLDALLSQV	9	Unmodified	_SLDALLSQV_					0	0	0		ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8	ENSG00000159479|ENST00000372457|MED8	ENSG00000159479|ENST00000372457|MED8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	945.5262939333916	1	945.525138	944.517862	1.744	0.001649	0.081805	7.7349E-05	1.8258	0.0017264	945.5242871736831	71.677	0.28307	72	71.848	72.132	0.32359					13	8	2	0	0	0	0.04145	1	30025	30025		74.929	3.7954	1	903220			31450	3533	15569	15631	36330	36330					0.04338347832060663
SLDALLSQV	9	Unmodified	_SLDALLSQV_					0	0	0		ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8	ENSG00000159479|ENST00000372457|MED8	ENSG00000159479|ENST00000372457|MED8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	945.5266601443291	1	945.525138	944.517862	2.7282	0.0025796	0.99869	0.00094428	3.7269	0.0035239	945.5258201595664	70.663	0.32036	72.017	71.84	72.161	1.3536					14	9	2	0	0	0	0.0017491	1	29634	29634		131.27	15.576	1	4157600			31451	3533	15569	15631	36331	36331					0.04338347832060663
SLDALLSQV	9	Unmodified	_SLDALLSQV_					0	0	0		ENSG00000159479|ENST00000372457|MED8;nc|ENSG00000159479|Q96G25-2|MED8	ENSG00000159479|ENST00000372457|MED8	ENSG00000159479|ENST00000372457|MED8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.5255615115166	1	945.525138	944.517862	2.3517	0.0022236	-0.0040786	-3.8564E-06	2.3476	0.0022197	945.5251929291732	70.188	0.34902	72.025	71.849	72.198	1.8378					17	10	2	0	0	0	0.0058174	1	29438	29438		118.89	6.3016	1	2044900			31452	3533	15569	15631	36332	36332					0.04338347832060663
SLDALSLSL	9	Unmodified	_SLDALSLSL_					0	0	0			REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5154296755791	1	918.514239	917.506963	1.8007	0.001654	0.48796	0.00044819	2.2887	0.0021022	918.5145038446474	49.39	0.49494	50.781	50.485	50.98	1.3911					25	15	2	0	0	0	0.1735	1	20709	20709		36.044	7.5574	1	1279000	+		31453	12054	15570	15632	36333	36333					0.04490945457780526
SLDALSLSL	9	Unmodified	_SLDALSLSL_					0	0	0			REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	REV__ENST00000204726.7_3_12:133398839-133405145:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.5164672732353	1	918.514239	917.506963	1.8376	0.0016879	-0.048935	-4.4947E-05	1.7887	0.0016429	918.5138102089084	48.799	0.46143	50.776	50.637	51.099	1.9772					22	14	2	0	0	0	0.1735	1	20448	20448		36.044	7.5574	1	1215100	+		31454	12054	15570	15632	36334	36334					0.04490945457780526
SLDDLIKI	8	Unmodified	_SLDDLIKI_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1731445193291	2	458.771126	915.527698	3.0771	0.0014117	0.57246	0.00026263	3.6495	0.0016743	458.7710995474625	62.218	0.4459	63.636	63.333	63.779	1.4177					27	13	3	0	0	0	2.3239	1	26132	26132		12.532	0	1	3396700	+	+	31455	8391	15571	15633	36335	36335					0.06655535837421667
SLDDLIKI	8	Unmodified	_SLDDLIKI_					0	0	0			REV__CON__Q3T052	REV__CON__Q3T052	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1728088259697	2	458.771126	915.527698	2.7344	0.0012545	0.64443	0.00029565	3.3788	0.0015501	458.77086053800144	61.656	0.3499	63.613	63.433	63.783	1.9571					24	10	3	0	0	0	2.3239	1	25897	25897		16.942	0	1	2240500	+	+	31456	8391	15571	15633	36336	36336					0.06655535837421667
SLDDLLIVL	9	Unmodified	_SLDDLLIVL_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7997009158134	2	500.799883	999.585213	2.5173	0.0012607	-3.0351	-0.00152	-0.51772	-0.00025927	500.7983536312579	76.192	0.47296	77.959	77.782	78.255	1.7672					32	14	3	0	0	0	0.24063	1	32065	32065		28.487	2.1456	1	2384700	+		31457	9904	15572	15634	36337	36337					0.08540378042994234
SLDDLLIVL	9	Unmodified	_SLDDLLIVL_					0	0	0			REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	REV__nc|ENSG00000134369|Q8NEY1-5|NAV1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	500.799883	999.585213	2.565	0.0012845	-4.2617	-0.0021343	-1.6967	-0.00084971	500.79742353163886	77.43	0.40853	77.747	77.511	77.92	0.31653	-0.045555	-0.0010391	NaN	28.487	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4512000	+		31458	9904	15572	15634							0.08540378042994234
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	989.5124389529228	1	989.514967	988.507691	1.5999	0.0015831	-1.5988	-0.001582	0.0010546	1.0435E-06	989.5133079997365	70.878	0.37861	70.878	70.657	71.035	0					26	11	3	0	0	0	0.029093	2	29485	29485;29532		88.904	24.667	1	1620600			31459	3053	15573	15635	36338;36339	36338					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2617675662041	2	495.261122	988.507691	1.2691	0.00062856	-0.53316	-0.00026405	0.73598	0.0003645	495.2608779982535	70.858	0.47317	70.858	70.657	71.13	0					35	14	3	0	0	0	0.037761	2	29543	29505;29543		78.149	13.913	1	5802700			31460	3053	15573	15635	36340;36341	36341					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2614623904228	2	495.261122	988.507691	1.9703	0.00097582	-0.45944	-0.00022754	1.5109	0.00074828	495.26088848740125	70.486	0.48834	70.809	70.591	71.079	0.32223					39	15	4	0	0	0	0.029093	3	29488	29488;29537;29576		88.904	24.667	1	5485400			31461	3053	15573	15635	36342;36343;36344	36342					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	989.5124999880791	1	989.514967	988.507691	1.4623	0.001447	-1.929	-0.0019088	-0.46673	-0.00046184	989.5126805130191	70.523	0.36705	70.845	70.619	70.986	0.32224					24	11	3	0	0	0	0.01454	2	29493	29493;29541		103.75	21.358	1	2187800			31462	3053	15573	15635	36345;36346	36345					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2628967165947	2	495.261122	988.507691	2.2911	0.0011347	0.60111	0.0002977	2.8922	0.0014324	495.2613762372578	69.559	0.5229	70.924	70.701	71.224	1.3657					52	16	5	0	0	0	0.01454	3	29200	29148;29200;29238		103.75	22.135	1	48090000			31463	3053	15573	15635	36347;36348;36349	36348					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	989.5148193240166	1	989.514967	988.507691	3.6975	0.0036587	-2.6533	-0.0026254	1.0442	0.0010333	989.5130865112995	69.526	0.39522	70.892	70.701	71.096	1.3657					29	12	3	0	0	0	0.00015001	2	29150	29150;29201		144.35	36.353	1	19608000			31464	3053	15573	15635	36350;36351	36350					0.012977401068042127
SLDDLLTNV	9	Unmodified	_SLDDLLTNV_					0	0	0		ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	ENSG00000143819|ENST00000272167|EPHX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2622558474541	2	495.261122	988.507691	1.3257	0.00065656	0.61971	0.00030692	1.9454	0.00096348	495.26144409507947	69.052	0.73985	70.905	70.648	71.387	1.853					67	23	5	0	0	0	0.018723	4	29027	28927;28976;29027;29067		100.37	29.238	1	43418000			31465	3053	15573	15635	36352;36353;36354;36355	36354					0.012977401068042127
SLDDLTNLVV	10	Unmodified	_SLDDLTNLVV_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.7950927615166	2	544.795329	1087.5761	2.031	0.0011065	-1.311	-0.00071421	0.71998	0.00039224	544.7945752841704	77.273	0.25123	77.589	77.418	77.669	0.31653					14	7	2	0	0	0	0.14401	1	32314	32314		56.177	12.319	1	1466700			31466	2089	15574	15636	36356	36356					0.03581984686661599
SLDDLTNLVV	10	Unmodified	_SLDDLTNLVV_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7971679568291	2	544.795329	1087.5761	2.4321	0.001325	1.9139	0.0010427	4.346	0.0023677	544.7962946949589	76.421	0.43147	77.715	77.488	77.92	1.2938					23	13	2	0	0	0	0.057925	2	32055	32055;32104		92.491	40.223	1	3094800			31467	2089	15574	15636	36357;36358	36357					0.03581984686661599
SLDDLTNLVV	10	Unmodified	_SLDDLTNLVV_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1088.587817370892	1	1088.58338	1087.5761	2.2708	0.002472	-1.9194	-0.0020894	0.3514	0.00038253	1088.582191468353	76.421	0.21739	77.715	77.575	77.792	1.2938					10	6	2	0	0	0	0.048317	1	32092	32092		85.642	13.719	1	1607000			31468	2089	15574	15636	36359	36359					0.03581984686661599
SLDDLTNLVV	10	Unmodified	_SLDDLTNLVV_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7968627810478	2	544.795329	1087.5761	2.7506	0.0014985	1.3241	0.00072138	4.0748	0.0022199	544.7958366804382	75.917	0.43031	77.684	77.478	77.909	1.7672					22	13	2	0	0	0	0.092962	1	31843	31843		65.235	25.285	1	2489300			31469	2089	15574	15636	36360	36360					0.03581984686661599
SLDDLTNLVV	10	Unmodified	_SLDDLTNLVV_					0	0	0		ENSG00000119912|ENST00000265986|IDE;ENST00000478361.6_1_10:94240585-94297282:-|nuORF	ENSG00000119912|ENST00000265986|IDE	ENSG00000119912|ENST00000265986|IDE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1088.587084949017	1	1088.58338	1087.5761	2.9517	0.0032132	-1.5204	-0.0016551	1.4313	0.0015581	1088.582243951346	75.948	0.15523	77.715	77.627	77.782	1.7672					8	4	2	0	0	0	0.066517	1	31879	31879		71.922	24.174	1	1172400			31470	2089	15574	15636	36361	36361					0.03581984686661599
SLDFAQNFI	9	Unmodified	_SLDFAQNFI_					0	0	0		nc|ENSG00000007062|O43490-5|PROM1;nc|ENSG00000007062|O43490-3|PROM1;nc|ENSG00000007062|O43490-4|PROM1;nc|ENSG00000007062|O43490-6|PROM1;nc|ENSG00000007062|O43490-7|PROM1;nc|ENSG00000007062|O43490-2|PROM1;ENSG00000007062|ENST00000447510|PROM1	nc|ENSG00000007062|O43490-5|PROM1	nc|ENSG00000007062|O43490-5|PROM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7656127810478	2	527.763832	1053.51311	2.3712	0.0012514	0.55915	0.0002951	2.9304	0.0015465	527.7637946097444	82.531	0.2437	82.811	82.644	82.888	0.2802					14	7	3	0	0	0	0.5697	1	34518	34518		12.532	4.6214	1	1648900			31471	516	15575	15637	36362	36362					-0.011505363107289668
SLDFSTRTQ	9	Unmodified	_SLDFSTRTQ_					0	0	0		nc|ENSG00000148082|Q92529-2|SHC3;ENSG00000148082|ENST00000375835|SHC3	nc|ENSG00000148082|Q92529-2|SHC3	nc|ENSG00000148082|Q92529-2|SHC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1054.522998034954	1	1054.51636	1053.50909	2.8023	0.0029551	0.011764	1.2406E-05	2.8141	0.0029675	1054.5149750851485	82.524	0.27455	82.804	82.644	82.919	0.2802					14	8	2	0	0	0	0.5697	1	34550	34550		12.532	0	1	541400			31472	3195	15576	15638	36363	36363					-0.015526258044246788
SLDGFFCL	8	Unmodified	_SLDGFFCL_					0	0	0		ENST00000266659.7_2_12:75874524-75874749:+|nuORF	ENST00000266659.7_2_12:75874524-75874749:+|nuORF	ENST00000266659.7_2_12:75874524-75874749:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1421996951103	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.13	1	115.13	114.63	115.63	0								0	0	0	1.0178	1	49688	49688		1.8442	0	1				31473	5658	15577	15639	36364	36364					-0.04904624165646965
SLDGIPFTV	9	Unmodified	_SLDGIPFTV_					0	0	0		TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant;ENSG00000145012|ENST00000617246|LPP	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5073119997978	1	948.503674	947.496398	1.9703	0.0018689	0.84726	0.00080363	2.8176	0.0026725	948.5043114694662	75.643	0.31062	76.949	76.799	77.11	1.3063					13	9	2	0	0	0	0.083604	1	31730	31730		54.774	12.679	1	1250600			31474	3099	15578	15640	36365	36365					0.020549628033336376
SLDGIPFTV	9	Unmodified	_SLDGIPFTV_					0	0	0		TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant;ENSG00000145012|ENST00000617246|LPP	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5062133669853	1	948.503674	947.496398	2.9448	0.0027931	-0.5021	-0.00047625	2.4427	0.0023169	948.5041162404077	75.19	0.24957	76.972	76.822	77.072	1.7817					12	7	2	0	0	0	0.066815	1	31546	31546		61.357	15.337	1	1425300			31475	3099	15578	15640	36366	36366					0.020549628033336376
SLDGIPFTV	9	Unmodified	_SLDGIPFTV_					0	0	0		TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant;ENSG00000145012|ENST00000617246|LPP	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	TRIP6|p.G371S|1|0.19|ENSG00000087077|chr7:100871654-100871654|G/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	948.503674	947.496398	2.1971	0.002084	-2.6872	-0.0025489	-0.49014	-0.0004649	948.5023838366745	76.657	0.15884	76.974	76.913	77.072	0.31653	0.0089209	-0.0019726	NaN	61.357	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370710			31476	3099	15578	15640							0.020549628033336376
SLDGIVRL	8	Unmodified	_SLDGIVRL_					0	0	0		ENSG00000127837|ENST00000248450|AAMP;ENST00000494720.5_1_2:219129258-219130297:-|nuORF;ENST00000475678.5_1_2:219129258-219130549:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7646362185478	2	436.763635	871.512717	2.503	0.0010932	-0.099564	-4.3486E-05	2.4034	0.0010497	436.76357462919106	47.65	0.28316	49.033	48.89	49.173	1.3825					16	8	2	0	0	0	0.52405	1	19944	19944		46.021	6.0636	1	1375600			31477	2346	15579	15641	36367	36367					0.071820887600893
SLDGIVRL	8	Unmodified	_SLDGIVRL_					0	0	0		ENSG00000127837|ENST00000248450|AAMP;ENST00000494720.5_1_2:219129258-219130297:-|nuORF;ENST00000475678.5_1_2:219129258-219130549:-|nuORF	ENSG00000127837|ENST00000248450|AAMP	ENSG00000127837|ENST00000248450|AAMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.7648803591728	2	436.763635	871.512717	2.5433	0.0011108	0.85824	0.00037485	3.4016	0.0014857	436.7641540991827	47.179	0.28281	49.155	48.999	49.282	1.976					13	8	2	0	0	0	0.80889	1	19788	19788		20.454	4.6064	1	1071600			31478	2346	15579	15641	36368	36368					0.071820887600893
SLDIITITV	9	Unmodified	_SLDIITITV_					0	0	0		ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant;nc|ENSG00000133657|Q9H7F0|ATP13A3;ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7933837771416	2	487.792058	973.569563	2.7301	0.0013317	0.41679	0.00020331	3.1469	0.001535	487.79180745634085	79.998	0.4329	81.249	81.017	81.45	1.2512					25	13	3	0	0	0	0.27148	2	33562	33562;33625		26.884	6.43	1	979100			31479	88	15580	15642	36369;36370	36369					0.0817209152594387
SLDIITITV	9	Unmodified	_SLDIITITV_					0	0	0		ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant;nc|ENSG00000133657|Q9H7F0|ATP13A3;ENSG00000133657|ENST00000645319|ATP13A3;nc|ENSG00000133657|Q9H7F0-2|ATP13A3	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	ATP13A3|p.I686Mfs*20|1|0.05|ENSG00000133657|chr3:194437157-194437158|-/CACATTGAAATACAATTCTATCC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.792058	973.569563	1.6418	0.00080086	0.13368	6.521E-05	1.7755	0.00086607	487.79217872434066	79.499	0.3074	81.215	81.046	81.353	1.7167	-0.016901	-7.2646E-05	NaN	26.884	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	560280			31480	88	15580	15642							0.0817209152594387
SLDLDEQH	8	Unmodified	_SLDLDEQH_					0	0	0			REV__ENST00000546134.5_1_12:26108085-26109638:-|nuORF	REV__ENST00000546134.5_1_12:26108085-26109638:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7220947146416	2	478.719621	955.42469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.371	1	81.106	80.606	81.606	1.735								0	0	0	1.0178	1	33289	33289		18.146	2.2992	1		+		31481	13804	15581	15643	36371	36371					-0.054805766211757145
SLDLKQLKALH	11	Unmodified	_SLDLKQLKALH_					0	0	0			REV__MECOM-LRRC31|1|fusion	REV__MECOM-LRRC31|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5921203494072	3	422.590717	1264.75032	1.7239	0.0007285	3.5968	0.00152	5.3207	0.0022485	422.59219667049217	35.708	0.2201	36.009	35.806	36.026	0.30197					34	20	2	0	0	0	0.99899	1	15002	15002		3.8459	0.25885	1	12585000	+		31482	9404	15582	15644	36372	36372					0.12853609902640528
SLDLKQLKALH	11	Unmodified	_SLDLKQLKALH_					0	0	0			REV__MECOM-LRRC31|1|fusion	REV__MECOM-LRRC31|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5930969119072	3	422.590717	1264.75032	1.7303	0.00073122	2.9108	0.0012301	4.6411	0.0019613	422.5917511406409	35.757	0.11955	36.059	36.018	36.137	0.30197					12	9	2	0	0	0	0.99899	1	15046	15046		3.8459	0.52627	1	15037000	+		31483	9404	15582	15644	36373	36373					0.12853609902640528
SLDLKQLKALH	11	Unmodified	_SLDLKQLKALH_					0	0	0			REV__MECOM-LRRC31|1|fusion	REV__MECOM-LRRC31|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.9272949099541	3	422.590717	1264.75032	0.81639	0.000345	3.5743	0.0015105	4.3907	0.0018555	422.5921647102681	33.718	0.28762	35.54	35.35	35.637	1.8227					41	27	2	0	0	0	1.0032	1	14115	14115		3.5927	1.1579	1	15042000	+		31484	9404	15582	15644	36374	36374					0.12853609902640528
SLDLKQLKALH	11	Unmodified	_SLDLKQLKALH_					0	0	0			REV__MECOM-LRRC31|1|fusion	REV__MECOM-LRRC31|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	422.590717	1264.75032	1.7239	0.0007285	3.5968	0.00152	5.3207	0.0022485	422.59219667049217	35.708	0.2201	36.009	35.806	36.026	0.30197	0	0	NaN	3.8459	34	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12585000	+		31485	9404	15582	15644							0.12853609902640528
SLDLRPLEV	9	Unmodified	_SLDLRPLEV_					0	0	0		nc|ENSG00000087085|P22303-3|ACHE;ENSG00000087085|ENST00000241069|ACHE;nc|ENSG00000087085|P22303-4|ACHE;nc|ENSG00000087085|P22303-2|ACHE	nc|ENSG00000087085|P22303-3|ACHE	nc|ENSG00000087085|P22303-3|ACHE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3021118044853	2	521.300581	1040.58661	1.8373	0.0009578	-0.48466	-0.00025266	1.3527	0.00070514	521.3004117181079	54.527	0.35138	55.932	55.739	56.09	1.4048					24	10	3	0	0	0	0.028318	2	22792	22792;22832		90.135	27.562	1	3867000			31486	1081	15583	15645	36375;36376	36375					0.06794012131740601
SLDLRPLEV	9	Unmodified	_SLDLRPLEV_					0	0	0		nc|ENSG00000087085|P22303-3|ACHE;ENSG00000087085|ENST00000241069|ACHE;nc|ENSG00000087085|P22303-4|ACHE;nc|ENSG00000087085|P22303-2|ACHE	nc|ENSG00000087085|P22303-3|ACHE	nc|ENSG00000087085|P22303-3|ACHE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2996093630791	2	521.300581	1040.58661	1.5187	0.00079172	-0.55766	-0.00029071	0.96107	0.00050101	521.300286844242	54.03	0.37748	55.998	55.783	56.16	1.9684					28	11	3	0	0	0	0.050451	2	22610	22610;22666		67.838	22.139	1	3391900			31487	1081	15583	15645	36377;36378	36377					0.06794012131740601
SLDLRPLEV	9	Unmodified	_SLDLRPLEV_					0	0	0		nc|ENSG00000087085|P22303-3|ACHE;ENSG00000087085|ENST00000241069|ACHE;nc|ENSG00000087085|P22303-4|ACHE;nc|ENSG00000087085|P22303-2|ACHE	nc|ENSG00000087085|P22303-3|ACHE	nc|ENSG00000087085|P22303-3|ACHE	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	521.300581	1040.58661	2.2796	0.0011884	-1.3435	-0.00070035	0.93618	0.00048803	521.2995184879286	55.733	0.24369	56.054	55.895	56.139	0.32088	0.059045	-0.00073735	NaN	90.135	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1089200			31488	1081	15583	15645							0.06794012131740601
SLDLRRLFQVP	11	Unmodified	_SLDLRRLFQVP_					0	0	0			REV__SLC48A1-HECA|1|fusion	REV__SLC48A1-HECA|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	672.8392822146416	2	672.393336	1342.77212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.73	1	114.88	114.38	115.38	0.14976								0	0	0	0.63775	1	49631	49631		3.2813	0	1		+		31489	9363	15584	15646	36379	36379					0.11444414651214174
SLDQPTQTV	9	Unmodified	_SLDQPTQTV_					0	0	0		ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL	ENST00000565932.5_1_16:28734455-28746831:+|nuORF	ENST00000565932.5_1_16:28734455-28746831:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7514526247978	2	494.750921	987.48729	1.1434	0.00056571	0.17927	8.8693E-05	1.3227	0.0006544	494.7508790616734	22.411	0.25478	23.588	23.444	23.699	1.177					15	7	3	0	0	0	0.32838	1	9346	9346		24.021	5.8742	1	932860			31490	4681	15585	15647	36380	36380					-0.0069543055299163825
SLDQPTQTV	9	Unmodified	_SLDQPTQTV_					0	0	0		ENST00000565932.5_1_16:28734455-28746831:+|nuORF;nc|ENSG00000184110|Q99613-2|EIF3C;ENSG00000184110|ENST00000331666|EIF3C;ENSG00000205609|ENST00000380876|EIF3CL	ENST00000565932.5_1_16:28734455-28746831:+|nuORF	ENST00000565932.5_1_16:28734455-28746831:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7514526247978	2	494.750921	987.48729	0.52574	0.00026011	0.19168	9.4836E-05	0.71742	0.00035495	494.7509183968619	22.042	0.25237	23.658	23.518	23.77	1.6158					13	7	2	0	0	0	0.25667	1	9178	9178		27.629	6.0918	1	926290			31491	4681	15585	15647	36381	36381					-0.0069543055299163825
SLDRLQILI	9	Unmodified	_SLDRLQILI_					0	0	0			REV__tr|A0A553SJJ2|A0A553SJJ2_NIACIHomoserinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16790PE=3SV=1	REV__tr|A0A553SJJ2|A0A553SJJ2_NIACIHomoserinedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_16790PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1646606326103	2	535.832049	1069.64954	1.8407	0.00098631	0.59533	0.00031899	2.436	0.0013053	535.832282359123	71.877	0.44321	72.202	71.977	72.42	0.32494					31	13	3	0	0	0	0.11645	1	30152	30152		4.756	0	1	2522500	+		31492	14908	15586	15648	36382	36382					0.11750577919815441
SLDRLRKV	8	Unmodified	_SLDRLRKV_					0	0	0		chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8;chr1:54908858-54986097|175|10.81|0.03|8.66|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2287475466728	2	493.808908	985.603263	2.374	0.0011723	0.55683	0.00027497	2.9308	0.0014473	493.8098733771321	64.423	0.18717	66.352	66.202	66.389	1.928					8	5	2	0	0	0	2.3239	1	26971	26971		2.0598	0	1	221940			31493	175	15587	15649	36383	36383					0.10988557808389032
SLDRLRKV	8	Unmodified	_SLDRLRKV_					0	0	0		chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8;chr1:54908858-54986097|175|10.81|0.03|8.66|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	493.808908	985.603263	3.1005	0.0015311	-1.916	-0.00094612	1.1846	0.00058495	493.8084377903358	64.883	0.12407	66.282	66.224	66.348	1.3989	-0.034801	-0.00050744	NaN	2.0598	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487300			31494	175	15587	15649							0.10988557808389032
SLDSDCGY	8	Unmodified	_SLDSDCGY_					0	0	0		ENST00000381359.5_2_15:44086262-44086427:+|nuORF	ENST00000381359.5_2_15:44086262-44086427:+|nuORF	ENST00000381359.5_2_15:44086262-44086427:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3155395388603	1	859.313825	858.306548	3.1053	0.0026684	-2.1333	-0.0018331	0.972	0.00083525	859.3114930173457	101.99	0.11761	102.18	102.11	102.23	0.19076					5	3	2	0	0	0	0.89008	1	42891	42891		2.5775	0	1	9397400			31495	6233	15588	15650	36384	36384					-0.12827272201343476
SLDSYADKE	9	Unmodified	_SLDSYADKE_					0	0	0		tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2352783083916	2	514.232561	1026.45057	2.5522	0.0013124	3.6445	0.0018741	6.1967	0.0031866	514.2341525183512	69.527	0.39072	70.893	70.674	71.064	1.3657					29	12	4	0	0	0	0.22861	1	29194	29194		25.399	0	1	2726500			31496	16586	15589	15651	36385	36385					-0.0615972716957458
SLDTLLEAV	9	Unmodified	_SLDTLLEAV_					0	0	0		ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-4|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7664367556572	2	480.76604	959.517527	2.6224	0.0012608	-0.65691	-0.00031582	1.9655	0.00094496	480.76572753722684	65.667	0.36662	67.066	66.849	67.216	1.3989					19	11	2	0	0	0	0.12174	1	27554	27554		42.095	6.0504	1	1935100			31497	2793	15590	15652	36386	36386					0.03614928112187954
SLDTLLEAV	9	Unmodified	_SLDTLLEAV_					0	0	0		ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-4|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	480.76604	959.517527	1.9249	0.00092542	-0.59342	-0.0002853	1.3315	0.00064013	480.7656965022586	67.118	0.17867	67.118	67.022	67.201	0	0.047675	1.8018E-05	NaN	42.095	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	514060			31498	2793	15590	15652							0.03614928112187954
SLDTLLEAV	9	Unmodified	_SLDTLLEAV_					0	0	0		ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-4|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	480.76604	959.517527	1.7139	0.00082401	-0.17143	-8.2417E-05	1.5425	0.00074159	480.7656920069927	65.174	0.31091	67.082	66.938	67.248	1.9085	0.011611	0.00042378	NaN	42.095	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1649600			31499	2793	15590	15652							0.03614928112187954
SLDVPHIIM	9	Unmodified	_SLDVPHIIM_					0	0	0		nc|ENSG00000185046|Q7Z6G8-4|ANKS1B;nc|ENSG00000185046|Q7Z6G8-3|ANKS1B;nc|ENSG00000185046|Q7Z6G8|ANKS1B;ENSG00000185046|ENST00000683438|ANKS1B	nc|ENSG00000185046|Q7Z6G8-4|ANKS1B	nc|ENSG00000185046|Q7Z6G8-4|ANKS1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7796508669853	2	512.778428	1023.5423	2.3001	0.0011795	0.92886	0.0004763	3.229	0.0016558	512.7788188120651	45.609	0.6629	46.985	46.702	47.365	1.3751					39	20	3	0	0	0	0.44535	1	19189	19189		18.135	1.0484	1	1512400			31500	4731	15591	15653	36387	36387					0.0314728471394119
SLEDLYSQI	9	Unmodified	_SLEDLYSQI_					0	0	0		tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2684203982353	2	534.266404	1066.51826	1.5169	0.00081045	3.6661	0.0019587	5.1831	0.0027691	534.2682969671536	83.958	0.29291	85.145	84.987	85.28	1.1879					23	9	3	0	0	0	0.68551	1	35257	35257		7.9102	0.62092	1	3356500			31501	16916	15592	15654	36388	36388					-0.012342772387455625
SLEDLYSQI	9	Unmodified	_SLEDLYSQI_					0	0	0		tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	534.266404	1066.51826	2.6392	0.0014101	5.6415	0.0030141	8.2808	0.0044241	534.2690849259201	84.829	0.31856	85.09	84.886	85.204	0.26083	-0.028579	0.0011644	NaN	7.9102	30	9	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1970500			31502	16916	15592	15654							-0.012342772387455625
SLEDLYSQI	9	Unmodified	_SLEDLYSQI_					0	0	0		tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	tr|A0A7D6VTG0|A0A7D6VTG0_9CLOTTranslationinitiationfactorIF-2OS=ClostridiumintestinaleOX=36845GN=infBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	534.266404	1066.51826	1.844	0.00098521	3.9953	0.0021346	5.8394	0.0031198	534.2687376278304	83.483	0.33509	85.121	84.98	85.315	1.6379	0.0020077	-0.00059467	NaN	7.9102	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3083600			31503	16916	15592	15654							-0.012342772387455625
SLEEAIRIA	9	Unmodified	_SLEEAIRIA_					0	0	0		nc|ENSG00000166478|P52747-2|ZNF143;nc|ENSG00000166478|P52747-3|ZNF143;ENSG00000166478|ENST00000396602|ZNF143;ENST00000532305.1_1_11:9546777-9549157:+|nuORF	nc|ENSG00000166478|P52747-2|ZNF143	nc|ENSG00000166478|P52747-2|ZNF143	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	500.7961303591728	2	501.284931	1000.55531	2.1844	0.001095	-3.4824	-0.0017457	-1.298	-0.00065066	501.28372210451965	61.117	0.09145	63.082	63.036	63.127	1.9653					4	2	2	0	0	0	0.082477	1	25662	25662		32.305	8.2849	1	18928000			31504	3905	15593	15655	36389	36389					0.05505439097657927
SLEELLHYV	9	Unmodified	_SLEELLHYV_					0	0	0		ENST00000507575.5_1_5:177558043-177570729:+|nuORF;ENSG00000145916|ENST00000313386|RMND5B	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	551.7931396365166	2	551.792589	1101.57063	1.4441	0.00079683	-0.6381	-0.0003521	0.80597	0.00044473	551.792142421824	76.122	0.48698	76.122	75.948	76.435	0					42	15	4	0	0	0	0.01705	2	31715	31665;31715		101.72	23.738	1	7757600			31505	3129	15594	15656	36390;36391	36391					0.02390305894869016
SLEELLHYV	9	Unmodified	_SLEELLHYV_					0	0	0		ENST00000507575.5_1_5:177558043-177570729:+|nuORF;ENSG00000145916|ENST00000313386|RMND5B	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	551.7936889529228	2	551.792589	1101.57063	2.3708	0.0013082	-0.073194	-4.0388E-05	2.2976	0.0012678	551.7925229546083	75.637	0.5302	75.958	75.742	76.272	0.32163					48	16	4	0	0	0	0.022807	2	31608	31608;31655		97.075	29.731	1	5986500			31506	3129	15594	15656	36392;36393	36392					0.02390305894869016
SLEELLHYV	9	Unmodified	_SLEELLHYV_					0	0	0		ENST00000507575.5_1_5:177558043-177570729:+|nuORF;ENSG00000145916|ENST00000313386|RMND5B	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.7945434451103	2	551.792589	1101.57063	3.0686	0.0016932	0.191	0.00010539	3.2596	0.0017986	551.7927182233756	74.611	0.61082	75.917	75.669	76.28	1.3063					53	19	4	0	0	0	0.0082953	3	31305	31261;31305;31357		109.63	36.685	1	21223000			31507	3129	15594	15656	36394;36395;36396	36395					0.02390305894869016
SLEELLHYV	9	Unmodified	_SLEELLHYV_					0	0	0		ENST00000507575.5_1_5:177558043-177570729:+|nuORF;ENSG00000145916|ENST00000313386|RMND5B	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	ENST00000507575.5_1_5:177558043-177570729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.7941772341728	2	551.792589	1101.57063	2.9131	0.0016074	0.30636	0.00016905	3.2195	0.0017765	551.7927788589598	74.145	0.7771	75.941	75.657	76.434	1.7962					59	24	4	0	0	0	0.0045981	3	31096	31051;31096;31147		123.1	33.669	1	32220000			31508	3129	15594	15656	36397;36398;36399	36398					0.02390305894869016
SLEERRFYM	9	Unmodified	_SLEERRFYM_					0	0	0			REV__ENSG00000104290|ENST00000240093|FZD3	REV__ENSG00000104290|ENST00000240093|FZD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	615.7994872927666	2	615.800423	1229.58629	1.9701	0.0012132	-2.4372	-0.0015008	-0.46711	-0.00028765	615.798438169449	77.06	1.4499	77.376	76.689	78.138	0.31653					74	45	3	0	0	0	0.83753	1	32340	32340		1.8442	0	1	1092600	+		31509	9131	15595	15657	36400	36400					-0.019317308597464944
SLEFTKLLV	9	Unmodified	_SLEFTKLLV_					0	0	0			REV__tr|A0A7D6ZWC2|A0A7D6ZWC2_9CLOTRibosomalprocessingcysteineproteasePrpOS=ClostridiumintestinaleOX=36845GN=HZF06_18395PE=3SV=1	REV__tr|A0A7D6ZWC2|A0A7D6ZWC2_9CLOTRibosomalprocessingcysteineproteasePrpOS=ClostridiumintestinaleOX=36845GN=HZF06_18395PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3157836794853	2	525.3157	1048.61685	2.9997	0.0015758	-2.5536	-0.0013414	0.44614	0.00023437	525.3141907778775	62.896	0.86096	64.31	64.075	64.936	1.4134					76	27	4	0	0	0	0.037761	1	26416	26416		78.149	7.0158	1	23478000	+		31510	15745	15596	15658	36401	36401					0.09448370796917516
SLEFTKLLV	9	Unmodified	_SLEFTKLLV_					0	0	0			REV__tr|A0A7D6ZWC2|A0A7D6ZWC2_9CLOTRibosomalprocessingcysteineproteasePrpOS=ClostridiumintestinaleOX=36845GN=HZF06_18395PE=3SV=1	REV__tr|A0A7D6ZWC2|A0A7D6ZWC2_9CLOTRibosomalprocessingcysteineproteasePrpOS=ClostridiumintestinaleOX=36845GN=HZF06_18395PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3162719607353	2	525.3157	1048.61685	3.1046	0.0016309	-2.8901	-0.0015182	0.21456	0.00011271	525.3140965603634	62.355	0.48352	64.312	64.03	64.514	1.9571					30	15	2	0	0	0	0.023786	1	26155	26155		96.285	34.927	1	24901000	+		31511	15745	15596	15658	36402	36402					0.09448370796917516
SLEGIPLAQV	10	Unmodified	_SLEGIPLAQV_					0	0	0		ENSG00000138641|ENST00000402738|HERC3;ENST00000506714.5_1_4:89300148-89319290:+|nuORF;nc|ENSG00000138642|Q8IVU3-3|HERC6;nc|ENSG00000287542|Q15034-2|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	ENSG00000138641|ENST00000402738|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7961303591728	2	513.795132	1025.57571	1.9359	0.00099468	-1.8532	-0.00095214	0.08279	4.2537E-05	513.79423990372	66.908	0.25551	66.908	66.767	67.022	0					12	7	2	0	0	0	0.44465	1	27878	27878		30.637	11.198	1	661510			31512	2841;2842	15597	15659	36403	36403					0.06394609757489889
SLEGIPLAQV	10	Unmodified	_SLEGIPLAQV_					0	0	0		ENSG00000138641|ENST00000402738|HERC3;ENST00000506714.5_1_4:89300148-89319290:+|nuORF;nc|ENSG00000138642|Q8IVU3-3|HERC6;nc|ENSG00000287542|Q15034-2|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	ENSG00000138641|ENST00000402738|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.2494384646416	2	513.795132	1025.57571	2.0724	0.0010648	-0.5877	-0.00030196	1.4847	0.00076284	513.7949737700266	66.527	0.25313	66.852	66.685	66.939	0.32449					13	7	2	0	0	0	0.11298	1	27807	27807		46.021	13.715	1	535280			31513	2841;2842	15597	15659	36404	36404					0.06394609757489889
SLEGIPLAQV	10	Unmodified	_SLEGIPLAQV_					0	0	0		ENSG00000138641|ENST00000402738|HERC3;ENST00000506714.5_1_4:89300148-89319290:+|nuORF;nc|ENSG00000138642|Q8IVU3-3|HERC6;nc|ENSG00000287542|Q15034-2|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	ENSG00000138641|ENST00000402738|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7985107302666	2	513.795132	1025.57571	3.2477	0.0016686	1.602	0.0008231	4.8497	0.0024917	513.7963014972074	65.275	0.24754	66.674	66.54	66.788	1.3989					18	7	3	0	0	0	0.10797	1	27371	27371		62.573	26.446	1	1455000			31514	2841;2842	15597	15659	36405	36405					0.06394609757489889
SLEGIPLAQV	10	Unmodified	_SLEGIPLAQV_					0	0	0		ENSG00000138641|ENST00000402738|HERC3;ENST00000506714.5_1_4:89300148-89319290:+|nuORF;nc|ENSG00000138642|Q8IVU3-3|HERC6;nc|ENSG00000287542|Q15034-2|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6;ENSG00000138642|ENST00000264346|HERC6	ENSG00000138641|ENST00000402738|HERC3;nc|ENSG00000138642|Q8IVU3-2|HERC6	nc|ENSG00000138642|Q8IVU3-2|HERC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7964965701103	2	513.795132	1025.57571	2.1931	0.0011268	1.3365	0.00068667	3.5296	0.0018135	513.796134953653	64.847	0.34312	66.775	66.583	66.926	1.928					22	10	3	0	0	0	0.076926	1	27216	27216		68.081	30.107	1	992880			31515	2841;2842	15597	15659	36406	36406					0.06394609757489889
SLEKDELKKL	10	Unmodified	_SLEKDELKKL_					0	0	0		tr|A0A7D6ZVX3|A0A7D6ZVX3_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05860PE=3SV=1	tr|A0A7D6ZVX3|A0A7D6ZVX3_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05860PE=3SV=1	tr|A0A7D6ZVX3|A0A7D6ZVX3_9CLOTPseudouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05860PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1808654665947	3	401.571211	1201.6918	1.8563	0.00074545	-0.24144	-9.6956E-05	1.6149	0.0006485	401.5712615509146	41.59	0.54204	41.907	41.65	42.192	0.31683					51	17	4	0	0	0	0.12535	1	17403	17403		1.7423	1.1154	1	18576000			31516	17160	15598	15660	36407	36407					0.09902508537516042
SLEKRQKRRWY	11	Unmodified	_SLEKRQKRRWY_					0	0	0			REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	518.0887939333916	3	517.295186	1548.86373	1.8776	0.00097127	-3.7813	-0.0019561	-1.9037	-0.00098479	517.2939962820464	95.833	0.38052	95.833	95.539	95.92	0					21	12	2	0	0	0	0.14606	1	40043	40043		0.08335	0	1	969900	+		31517	10459	15599	15661	36408	36408					0.11125098068396255
SLEKRQKRRWY	11	Unmodified	_SLEKRQKRRWY_					0	0	0			REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	REV__nc|ENSG00000154134|Q96MS0-2|ROBO3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	518.0898925662041	3	517.295186	1548.86373	2.8641	0.0014816	-4.3331	-0.0022415	-1.469	-0.0007599	517.2940531927503	95.606	0.39301	95.729	95.49	95.883	0.12331					24	14	2	0	0	0	0.14606	1	39998	39998		0.08335	0	1	865960	+		31518	10459	15599	15661	36409	36409					0.11125098068396255
SLEKVLEFK	9	Unmodified	_SLEKVLEFK_					0	0	0		ENST00000474802.1_1_2:27355436-27356101:-|nuORF;ENST00000468045.5_1_2:27354838-27356101:-|nuORF;ENSG00000138073|ENST00000260643|PREB	ENST00000474802.1_1_2:27355436-27356101:-|nuORF	ENST00000474802.1_1_2:27355436-27356101:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8206664919853	2	546.818607	1091.62266	3.1006	0.0016955	0.44417	0.00024288	3.5448	0.0019384	546.8187786967859	74.522	0.79125	75.84	75.31	76.101	1.318					67	25	4	0	0	0	0.30098	1	31294	31294		25.399	1.3787	1	12766000			31519	2809	15600	15662	36410	36410					0.08051469308588821
SLELGVLFL	9	Unmodified	_SLELGVLFL_					0	0	0			REV__ENST00000337120.9_2_16:28875803-28875908:+|nuORF	REV__ENST00000337120.9_2_16:28875803-28875908:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7974731326103	2	495.797143	989.579734	2.018	0.0010005	-2.6178	-0.0012979	-0.59979	-0.00029737	495.79590792211917	69.383	0.40926	69.705	69.469	69.878	0.32224					20	12	2	0	0	0	0.46905	1	29060	29060		16.942	0	1	1380600	+		31520	12472	15601	15663	36411	36411					0.0845269925117691
SLELLCTRT	9	Unmodified	_SLELLCTRT_					0	0	0			REV__ENST00000338560.11_1_17:16318878-16320981:+|nuORF	REV__ENST00000338560.11_1_17:16318878-16320981:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.8251220583916	2	518.278792	1034.54303	3.1487	0.0016319	2.3079	0.0011961	5.4565	0.002828	518.2805809316164	81.16	0.49667	82.856	82.547	83.043	1.6959					35	15	4	0	0	0	0.08828	1	33968	33968		21.747	0	1	5130400	+		31521	12482	15602	15664	36412	36412					0.027140793629769178
SLEQQILKE	9	Unmodified	_SLEQQILKE_					0	0	0			REV__ENSG00000081014|ENST00000261842|AP4E1	REV__ENSG00000081014|ENST00000261842|AP4E1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2530090212822	3	363.20464	1086.59209	-0.14213	-5.1623E-05	0.58097	0.00021101	0.43884	0.00015939	363.20500158416087	28.489	0.21468	29.768	29.576	29.791	1.2789					8	6	2	0	0	0	0.11944	1	11899	11899		0.20686	0	1	470460	+		31522	8811	15603	15665	36413	36413					0.05225690923566617
SLERHKEQL	9	Unmodified	_SLERHKEQL_					0	0	0		nc|ENSG00000167671|Q9BZV1-2|UBXN6;ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4446489-4446828:-|nuORF	nc|ENSG00000167671|Q9BZV1-2|UBXN6	nc|ENSG00000167671|Q9BZV1-2|UBXN6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3144409060478	2	570.312012	1138.60947	0.65242	0.00037208	0.13913	7.9349E-05	0.79155	0.00045143	570.3122370501967	23.384	0.40503	23.617	23.442	23.847	0.23306					27	12	3	0	0	0	0.51189	1	9744	9744		14.838	1.7958	1	1514000			31523	3984	15604	15666	36414	36414					0.045710312492246885
SLEVKSLSI	9	Unmodified	_SLEVKSLSI_					0	0	0			REV__NCAM2|p.G35A|1|0.57|ENSG00000154654|chr21:21280626-21280626|G/C|missense_variant	REV__NCAM2|p.G35A|1|0.57|ENSG00000154654|chr21:21280626-21280626|G/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.7595703005791	2	488.289682	974.564812	2.0701	0.0010108	1.8385	0.00089773	3.9086	0.0019085	488.2908780753825	46.872	0.28759	48.255	48.058	48.346	1.3825					14	8	2	0	0	0	0.087598	1	19613	19613		31.268	8.5321	1	509100	+		31524	10478	15605	15667	36415	36415					0.0765120738318501
SLFAGGMLRV	10	Unmodified	_SLFAGGMLRV_					0	0	0		ENST00000513799.5_1_5:177019550-177022414:+|nuORF;ENSG00000184840|ENST00000332598|TMED9	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.7927734255791	2	525.791869	1049.56919	2.3216	0.0012207	-0.47332	-0.00024887	1.8483	0.00097182	525.7916628537081	62.251	0.43646	62.251	62.024	62.461	0					52	13	5	0	0	0	0.050359	3	25984	25903;25945;25984		111.29	53.816	1	11630000			31525	4710	15606	15668	36416;36417;36418	36418					0.04638393325103607
SLFAGGMLRV	10	Unmodified	_SLFAGGMLRV_					0	0	0		ENST00000513799.5_1_5:177019550-177022414:+|nuORF;ENSG00000184840|ENST00000332598|TMED9	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.7933227419853	2	525.791869	1049.56919	2.1722	0.0011421	0.0226	1.1883E-05	2.1948	0.001154	525.7918736889292	61.634	0.46289	61.963	61.735	62.197	0.32974					53	14	5	0	0	0	0.043952	4	25813	25770;25813;25853;25898		82.529	33.491	1	13472000			31526	4710	15606	15668	36419;36420;36421;36422	36420					0.04638393325103607
SLFAGGMLRV	10	Unmodified	_SLFAGGMLRV_					0	0	0		ENST00000513799.5_1_5:177019550-177022414:+|nuORF;ENSG00000184840|ENST00000332598|TMED9	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7930175662041	2	525.791869	1049.56919	3.037	0.0015968	-0.98806	-0.00051952	2.0489	0.0010773	525.7914220649045	60.434	0.4325	61.854	61.626	62.059	1.4196					49	13	5	0	0	0	0.050359	3	25389	25290;25338;25389		99.799	49.866	1	41814000			31527	4710	15606	15668	36423;36424;36425	36425					0.04638393325103607
SLFAGGMLRV	10	Unmodified	_SLFAGGMLRV_					0	0	0		ENST00000513799.5_1_5:177019550-177022414:+|nuORF;ENSG00000184840|ENST00000332598|TMED9	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7905761599541	2	525.791869	1049.56919	3.0762	0.0016174	-0.7343	-0.00038609	2.3419	0.0012313	525.7916052754528	59.93	0.4369	61.899	61.64	62.077	1.969					46	13	5	0	0	0	0.052963	4	25090	25090;25127;25166;25206		99.799	41.12	1	40545000			31528	4710	15606	15668	36426;36427;36428;36429	36426					0.04638393325103607
SLFAGGMLRV	10	Oxidation (M)	_SLFAGGM(Oxidation (M))LRV_		SLFAGGM(1)LRV		SLFAGGM(44)LRV	0	0	1		ENST00000513799.5_1_5:177019550-177022414:+|nuORF;ENSG00000184840|ENST00000332598|TMED9	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	ENST00000513799.5_1_5:177019550-177022414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7902709841728	2	533.789327	1065.5641	2.4596	0.0013129	-4.4703	-0.0023862	-2.0107	-0.0010733	533.7882144911592	48.268	0.7087	50.245	49.837	50.546	1.9772					62	22	4	0	0	0	0.24244	1	20108	20108		43.772	9.3707	1	6073400			31529	4710	15606	15669	36430	36430		80			0.03394089462494776
SLFATISQPL	10	Unmodified	_SLFATISQPL_					0	0	0		ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	538.8403808474541	2	538.802957	1075.59136	2.3385	0.00126	-3.8591	-0.0020793	-1.5206	-0.00081931	539.3016514017851	47.731	0.28006	49.114	48.986	49.266	1.3825					12	8	2	0	0	0	0.12467	1	19997	19997		15.248	7.9593	1	290530			31530	5486	15607	15670	36431	36431					0.05658896274530889
SLFATISQPL	10	Unmodified	_SLFATISQPL_					0	0	0		ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	ENSG00000283439|ENST00000636696|SPEM3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	538.802957	1075.59136	2.6534	0.0014297	-0.94982	-0.00051177	1.7036	0.00091788	538.8020863133103	47.257	0.18645	49.233	49.125	49.311	1.976	0.059396	0.00213	NaN	20.415	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338640			31531	5486	15607	15670							0.05658896274530889
SLFDLNFQA	9	Unmodified	_SLFDLNFQA_					0	0	0		nc|ENSG00000181019|P15559-3|NQO1;nc|ENSG00000181019|P15559-2|NQO1;ENSG00000181019|ENST00000320623|NQO1	nc|ENSG00000181019|P15559-3|NQO1	nc|ENSG00000181019|P15559-3|NQO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7648803591728	2	527.763832	1053.51311	3.541	0.0018688	-1.1628	-0.00061368	2.3782	0.0012551	527.7628679749234	81.637	0.37061	82.87	82.656	83.027	1.2332					21	11	2	0	0	0	0.073578	2	34285	34236;34285		58.679	38.225	1	2108800			31532	4565	15608	15671	36432;36433	36433					-0.011505363107289668
SLFDLNFQA	9	Unmodified	_SLFDLNFQA_					0	0	0		nc|ENSG00000181019|P15559-3|NQO1;nc|ENSG00000181019|P15559-2|NQO1;ENSG00000181019|ENST00000320623|NQO1	nc|ENSG00000181019|P15559-3|NQO1	nc|ENSG00000181019|P15559-3|NQO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7643920779228	2	527.763832	1053.51311	3.2231	0.001701	1.9207	0.0010137	5.1438	0.0027147	527.7633098739803	81.225	0.49545	82.921	82.578	83.074	1.6959					49	15	5	0	0	0	0.066815	2	34040	34040;34088		61.357	35.958	1	5037100			31533	4565	15608	15671	36434;36435	36434					-0.011505363107289668
SLFDLNFQA	9	Unmodified	_SLFDLNFQA_					0	0	0		nc|ENSG00000181019|P15559-3|NQO1;nc|ENSG00000181019|P15559-2|NQO1;ENSG00000181019|ENST00000320623|NQO1	nc|ENSG00000181019|P15559-3|NQO1	nc|ENSG00000181019|P15559-3|NQO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.520678699017	1	1054.52039	1053.51311	3.9579	0.0041737	-1.9552	-0.0020618	2.0027	0.0021119	1054.5167036039766	81.231	0.27572	82.927	82.798	83.074	1.6959					17	8	3	0	0	0	0.026836	1	34066	34066		92.491	41.636	1	1843200			31534	4565	15608	15671	36436	36436					-0.011505363107289668
SLFDLNFQA	9	Unmodified	_SLFDLNFQA_					0	0	0		nc|ENSG00000181019|P15559-3|NQO1;nc|ENSG00000181019|P15559-2|NQO1;ENSG00000181019|ENST00000320623|NQO1	nc|ENSG00000181019|P15559-3|NQO1	nc|ENSG00000181019|P15559-3|NQO1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1054.52039	1053.51311	2.2494	0.002372	1.2013	0.0012668	3.4506	0.0036388	1054.5215862924417	82.887	0.21605	82.887	82.737	82.953	0	0.014489	0.0031482	NaN	92.491	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	489340			31535	4565	15608	15671							-0.011505363107289668
SLFEEMLQV	9	Unmodified	_SLFEEMLQV_					0	0	0		nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54	nc|ENSG00000100883|P61011-2|SRP54	nc|ENSG00000100883|P61011-2|SRP54	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	548.2756835818291	2	548.273175	1094.5318	2.3614	0.0012947	-2.0644	-0.0011319	0.29696	0.00016281	548.2720713074231	86.738	0.35059	86.738	86.489	86.84	0					24	12	3	0	0	0	0.022807	1	36178	36178		97.075	62.673	1	3924500			31536	1307	15609	15672	36437	36437					-0.011687427311699139
SLFEEMLQV	9	Unmodified	_SLFEEMLQV_					0	0	0		nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54	nc|ENSG00000100883|P61011-2|SRP54	nc|ENSG00000100883|P61011-2|SRP54	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	548.2742187380791	2	548.273175	1094.5318	2.5622	0.0014048	-0.65399	-0.00035857	1.9082	0.0010462	548.2727755635988	86.288	0.41103	86.532	86.306	86.717	0.24387					32	13	3	0	0	0	0.013238	1	36089	36089		104.8	33.666	1	6134400			31537	1307	15609	15672	36438	36438					-0.011687427311699139
SLFEEMLQV	9	Unmodified	_SLFEEMLQV_					0	0	0		nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54	nc|ENSG00000100883|P61011-2|SRP54	nc|ENSG00000100883|P61011-2|SRP54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.2738525271416	2	548.273175	1094.5318	2.8324	0.0015529	-2.5627	-0.0014051	0.2697	0.00014787	548.2719431079761	84.956	0.41547	86.553	86.311	86.727	1.5962					35	15	3	0	0	0	0.026628	1	35651	35651		92.822	46.801	1	11924000			31538	1307	15609	15672	36439	36439					-0.011687427311699139
SLFEEMLQV	9	Unmodified	_SLFEEMLQV_					0	0	0		nc|ENSG00000100883|P61011-2|SRP54;ENSG00000100883|ENST00000216774|SRP54	nc|ENSG00000100883|P61011-2|SRP54	nc|ENSG00000100883|P61011-2|SRP54	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	548.273175	1094.5318	2.3577	0.0012927	-1.4507	-0.00079535	0.90703	0.0004973	548.2724313641843	85.441	0.31204	86.568	86.386	86.698	1.1265	-0.029888	0.00024204	NaN	104.8	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8060100			31539	1307	15609	15672							-0.011687427311699139
SLFEFVYTV	9	Unmodified	_SLFEFVYTV_					0	0	0			REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|84|3|anti-sense	REV__MER57A-int_dup1703|chr19:23112751-23113886:+|1.0685339057591443|0.266030358890427|2.01|427.0|84|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.560961902142	1	1104.56119	1103.55391	5.5328	0.0061113	-2.2102	-0.0024413	3.3226	0.00367	1104.5588054241466	88.797	0.32318	89.854	89.659	89.982	1.0562					19	9	3	0	0	0	0.34572	1	37392	37392		23.148	0	1	1356800	+		31540	14362	15610	15673	36440	36440					0.006278050088894815
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1115.544116199017	1	1115.54079	1114.53351	2.5917	0.0028912	0.24811	0.00027678	2.8398	0.003168	1115.541368467464	88.575	0.42822	88.575	88.334	88.762	0					27	13	3	0	0	0	0.022807	3	37040	36994;37040;37079		97.075	54.98	1	3572100			31541	1801	15611	15674	36441;36442;36443	36442					-0.019173656509110515
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1115.548144519329	1	1115.54079	1114.53351	3.6042	0.0040206	1.0449	0.0011656	4.6491	0.0051862	1115.5428415963677	88.133	0.40378	88.368	88.163	88.567	0.23471					29	12	3	0	0	0	0.028763	2	36958	36907;36958		89.427	47.332	1	3758000			31542	1801	15611	15674	36444;36445	36445					-0.019173656509110515
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.2765991091728	2	558.274032	1114.53351	2.5382	0.001417	2.134	0.0011913	4.6722	0.0026084	558.2749833380483	88.168	0.31268	88.402	88.195	88.508	0.23471					22	9	3	0	0	0	0.5697	1	36925	36925		12.532	3.1841	1	2076700			31543	1801	15611	15674	36446	36446					-0.019173656509110515
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1115.547778308392	1	1115.54079	1114.53351	3.9357	0.0043905	0.83907	0.00093601	4.7748	0.0053265	1115.5425896509873	87.262	0.31119	88.354	88.179	88.49	1.0918					21	9	3	0	0	0	0.031324	1	36795	36795		85.357	47.383	1	3387100			31544	1801	15611	15674	36447	36447					-0.019173656509110515
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	558.274032	1114.53351	1.9502	0.0010888	2.4883	0.0013891	4.4385	0.0024779	558.27543926001	88.576	0.27692	88.576	88.424	88.701	0	0.13303	0.00076853	NaN	12.532	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	858690			31545	1801	15611	15674							-0.019173656509110515
SLFEGTWYL	9	Unmodified	_SLFEGTWYL_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	558.274032	1114.53351	4.3372	0.0024213	-2.6629	-0.0014866	1.6743	0.00093472	558.7738811389427	87.258	0.31093	88.35	88.148	88.459	1.0918	-0.092818	-0.004983	NaN	12.532	16	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1833500			31546	1801	15611	15674							-0.019173656509110515
SLFEHFIEL	9	Unmodified	_SLFEHFIEL_					0	0	0		WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant;WDFY3|p.S3365Qfs*9|1|0.07|ENSG00000163625|chr4:84678973-84678974|-/G|frameshift_variant;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;ENSG00000163625|ENST00000295888|WDFY3	WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.7953979372978	2	567.795132	1133.57571	1.7344	0.00098481	0.29299	0.00016636	2.0274	0.0011512	567.7950772932311	78.016	0.35229	78.326	78.163	78.516	0.30932					17	10	2	0	0	0	0.39927	1	32636	32636		20.454	6.0482	1	687390			31547	3704	15612	15675	36448	36448					0.014266097574591186
SLFEHFIEL	9	Unmodified	_SLFEHFIEL_					0	0	0		WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant;WDFY3|p.S3365Qfs*9|1|0.07|ENSG00000163625|chr4:84678973-84678974|-/G|frameshift_variant;nc|ENSG00000163625|Q8IZQ1-2|WDFY3;ENSG00000163625|ENST00000295888|WDFY3	WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	WDFY3|p.Q3037Rfs*34|1|0.06|ENSG00000163625|chr4:84691725-84691725|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	567.795132	1133.57571	1.4609	0.00082949	-1.4004	-0.00079514	0.060491	3.4347E-05	567.794095133072	78.596	0.34531	78.596	78.441	78.787	0	0.13517	-0.00096719	NaN	20.454	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	569020			31548	3704	15612	15675							0.014266097574591186
SLFEPPELL	9	Unmodified	_SLFEPPELL_					0	0	0			REV__ENST00000241527.10_1_2:242028119-242028287:-|nuORF	REV__ENST00000241527.10_1_2:242028119-242028287:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7844726443291	2	522.784233	1043.55391	3.6149	0.0018898	0.96735	0.00050571	4.5822	0.0023955	522.7847830414626	73.664	0.56463	74.982	74.654	75.218	1.318					42	17	3	0	0	0	0.22519	1	30857	30857		30.225	8.4782	1	2912700	+		31549	12123	15613	15676	36449	36449					0.03387805008901523
SLFERLVVL	9	Unmodified	_SLFERLVVL_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3307372927666	2	538.329142	1074.64373	1.7405	0.00093698	0.5898	0.00031751	2.3303	0.0012545	538.3299190889454	75.515	0.56943	75.515	75.154	75.723	0					46	17	4	0	0	0	0.098738	1	31455	31455		53.404	6.4831	1	7612600			31550	477	15614	15677	36450	36450					0.10939479408125408
SLFERLVVL	9	Unmodified	_SLFERLVVL_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.3305541872978	2	538.329142	1074.64373	2.6195	0.0014102	-0.098198	-5.2863E-05	2.5213	0.0013573	538.3289609172689	74.928	0.43716	75.252	75.02	75.458	0.32464					40	13	4	0	0	0	0.098738	3	31344	31299;31344;31399		53.404	12.61	1	10611000			31551	477	15614	15677	36451;36452;36453	36452					0.10939479408125408
SLFERLVVL	9	Unmodified	_SLFERLVVL_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3306762576103	2	538.329142	1074.64373	3.6662	0.0019736	-1.0933	-0.00058854	2.573	0.0013851	538.3285089611035	73.852	0.53197	75.17	74.873	75.405	1.318					50	16	5	0	0	0	0.052364	3	30967	30929;30967;31006		63.961	10.128	1	30188000			31552	477	15614	15677	36454;36455;36456	36455					0.10939479408125408
SLFERLVVL	9	Unmodified	_SLFERLVVL_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3304321169853	2	538.329142	1074.64373	2.7459	0.0014782	-0.32378	-0.0001743	2.4221	0.0013039	538.3289316418897	73.288	0.56247	75.098	74.86	75.423	1.8101					50	17	4	0	0	0	0.057802	3	30730	30688;30730;30770		61.602	19.762	1	25453000			31553	477	15614	15677	36457;36458;36459	36458					0.10939479408125408
SLFGGSVKL	9	Unmodified	_SLFGGSVKL_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.2670165896416	2	454.26601	906.517468	1.9959	0.00090668	0.33575	0.00015252	2.3317	0.0010592	454.2660900640773	51.474	0.46399	51.474	51.261	51.725	0					43	14	4	0	0	0	0.10478	2	21516	21416;21516		60.074	5.869	1	13785000			31554	4132	15615	15678	36460;36461	36461					0.06046972902856851
SLFGGSVKL	9	Unmodified	_SLFGGSVKL_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.2668640017509	2	454.26601	906.517468	2.301	0.0010453	-0.31844	-0.00014465	1.9826	0.00090061	454.2658282883123	50.979	0.49911	51.307	50.981	51.48	0.32824					44	15	4	0	0	0	0.093486	3	21358	21320;21358;21398		63.961	9.187	1	19036000			31555	4132	15615	15678	36462;36463;36464	36463					0.06046972902856851
SLFGGSVKL	9	Unmodified	_SLFGGSVKL_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.2672302126884	2	454.26601	906.517468	2.3218	0.0010547	0.058812	2.6716E-05	2.3806	0.0010814	454.26604979420296	49.574	0.55586	50.965	50.673	51.229	1.3911					56	17	4	0	0	0	0.052364	4	20728	20681;20728;20767;20806		82.529	14.449	1	56397000			31556	4132	15615	15678	36465;36466;36467;36468	36466					0.06046972902856851
SLFGGSVKL	9	Unmodified	_SLFGGSVKL_					0	0	0		ENSG00000170248|ENST00000307296|PDCD6IP;nc|ENSG00000170248|Q8WUM4-2|PDCD6IP;ENST00000477798.5_1_3:33840175-33866683:+|nuORF;nc|ENSG00000170248|Q8WUM4-3|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	ENSG00000170248|ENST00000307296|PDCD6IP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.2668334841728	2	454.26601	906.517468	2.0062	0.00091134	-0.058589	-2.6615E-05	1.9476	0.00088473	454.265990232795	48.985	0.58659	50.962	50.7	51.286	1.9772					53	18	4	0	0	0	0.06749	4	20494	20447;20494;20533;20572		75.761	17.082	1	57370000			31557	4132	15615	15678	36469;36470;36471;36472	36470					0.06046972902856851
SLFGKDIK	8	Unmodified	_SLFGKDIK_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.2654907107353	2	454.26601	906.517468	2.301	0.0010453	-0.31844	-0.00014465	1.9826	0.00090061	454.2658282883123	50.979	0.49911	51.307	50.981	51.48	0.32824					44	15	4	0	0	0	0.86792	1	21274	21274		13.906	3.0821	1	19036000			31558	4369	15616	15679	36473	36473					0.06046972902845482
SLFGKDIKV	9	Unmodified	_SLFGKDIKV_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.2017394900322	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.978	1	37.978	37.478	38.478	0								0	0	0	0.34469	1	15919	15919		14.218	2.7003	1				31559	4369	15617	15680	36474	36474					0.08331217482702868
SLFGKDIKV	9	Unmodified	_SLFGKDIKV_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2018920779228	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.322	1	37.627	37.127	38.127	0.30497								0	0	0	0.34469	1	15697	15697		14.218	2.7235	1				31560	4369	15617	15680	36475	36475					0.08331217482702868
SLFGKDIKV	9	Unmodified	_SLFGKDIKV_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MSMS	GG20161007_CRH_Patient100_A02_02	2	503.8004638552666	2	503.800217	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.395	1	37.7	37.2	38.2	0.30497								0	0	0	0.31592	1	15728	15728		22.658	9.6156	1				31561	4369	15617	15680	36476	36476					0.08331217482702868
SLFGKDIKV	9	Unmodified	_SLFGKDIKV_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7997619509697	2	503.800217	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.87	1	37.147	36.647	37.647	1.2762								0	0	0	0.34469	1	15059	15059		19.362	1.2156	1				31562	4369	15617	15680	36477	36477					0.08331217482702868
SLFGKDIKV	9	Unmodified	_SLFGKDIKV_					0	0	0		ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	ENSG00000175318|ENST00000309731|GRAMD2A	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2016479372978	3	336.20257	1005.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.3	1	37.118	36.618	37.618	1.8176								0	0	0	0.29891	1	14801	14801		18.721	2.9826	1				31563	4369	15617	15680	36478	36478					0.08331217482702868
SLFHSILNV	9	Unmodified	_SLFHSILNV_					0	0	0		nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.2903930544853	2	515.290017	1028.56548	2.135	0.0011001	-1.0945	-0.00056397	1.0405	0.00053615	515.2897220203606	64.595	0.29185	64.595	64.43	64.722	0					13	8	2	0	0	0	0.091139	1	26926	26926		52.268	8.4101	1	793530			31564	521	15618	15681	36479	36479					0.05234046822897653
SLFHSILNV	9	Unmodified	_SLFHSILNV_					0	0	0		nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.2914916872978	2	515.290017	1028.56548	2.0623	0.0010627	0.93821	0.00048345	3.0006	0.0015462	515.2904561522437	64.024	0.25548	64.353	64.241	64.497	0.32899					12	7	2	0	0	0	0.066815	1	26836	26836		61.357	9.0891	1	812020			31565	521	15618	15681	36480	36480					0.05234046822897653
SLFHSILNV	9	Unmodified	_SLFHSILNV_					0	0	0		nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2932617068291	2	515.290017	1028.56548	3.179	0.0016381	0.98366	0.00050687	4.1627	0.002145	515.2922935084229	62.732	0.32713	64.146	63.987	64.314	1.4134					21	10	3	0	0	0	0.044893	1	26333	26333		71.922	15.745	1	1730800			31566	521	15618	15681	36481	36481					0.05234046822897653
SLFHSILNV	9	Unmodified	_SLFHSILNV_					0	0	0		nc|ENSG00000007516|O94812-7|BAIAP3;nc|ENSG00000007516|O94812-5|BAIAP3;nc|ENSG00000007516|O94812-3|BAIAP3;ENSG00000007516|ENST00000426824|BAIAP3;nc|ENSG00000007516|O94812-2|BAIAP3;nc|ENSG00000007516|O94812|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	nc|ENSG00000007516|O94812-7|BAIAP3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	515.290017	1028.56548	3.401	0.0017525	-0.17967	-9.2581E-05	3.2213	0.0016599	515.2908158507987	62.169	0.23803	64.126	63.999	64.237	1.9571	-0.17876	-0.00064896	NaN	71.922	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2042800			31567	521	15618	15681							0.05234046822897653
SLFHSYDWS	9	Unmodified	_SLFHSYDWS_					0	0	0			REV__ENST00000554634.1_1_14:71773968-71777967:-|nuORF	REV__ENST00000554634.1_1_14:71773968-71777967:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.2528564333916	2	571.251089	1140.48762	1.8536	0.0010589	2.1133	0.0012072	3.967	0.0022661	571.2519941153703	39.89	0.46364	41.753	41.492	41.956	1.8624					24	14	3	0	0	0	0.59203	1	16735	16735		11.64	1.5664	1	899830	+		31568	13856	15619	15682	36482	36482					-0.07700010833150372
SLFHSYDWS	9	Unmodified	_SLFHSYDWS_					0	0	0			REV__ENST00000554634.1_1_14:71773968-71777967:-|nuORF	REV__ENST00000554634.1_1_14:71773968-71777967:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	571.251089	1140.48762	1.8536	0.0010589	2.1133	0.0012072	3.967	0.0022661	571.2519941153703	39.89	0.46364	41.753	41.492	41.956	1.8624	0.091978	-0.00017558	NaN	11.64	24	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899830	+		31569	13856	15619	15682							-0.07700010833150372
SLFHTIPPGM	10	Unmodified	_SLFHTIPPGM_					0	0	0		nc|ENSG00000079931|Q6UVY6-2|MOXD1;MOXD1|p.A576Efs*33|1|0.05|ENSG00000079931|chr6:132297268-132297268|G/-|frameshift_variant;ENSG00000079931|ENST00000367963|MOXD1	nc|ENSG00000079931|Q6UVY6-2|MOXD1	nc|ENSG00000079931|Q6UVY6-2|MOXD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2204467654228	2	550.283877	1098.5532	4.5293	0.0024924	3.4063	0.0018745	7.9357	0.0043669	550.2863421307133	90.022	0.22025	91.042	90.894	91.115	1.0199					9	6	2	0	0	0	0.12519	1	37903	37903		3.9444	2.4625	1	405450			31570	996	15620	15683	36483	36483					0.007866870882253352
SLFICRRRQRW	11	Unmodified	_SLFICRRRQRW_					0	0	0		ZNF236|p.L805Sfs*67|1|0.04|ENSG00000130856|chr18:76908440-76908441|-/AGTTCATTGCTGAATTCATTGTTCAT|frameshift_variant	ZNF236|p.L805Sfs*67|1|0.04|ENSG00000130856|chr18:76908440-76908441|-/AGTTCATTGCTGAATTCATTGTTCAT|frameshift_variant	ZNF236|p.L805Sfs*67|1|0.04|ENSG00000130856|chr18:76908440-76908441|-/AGTTCATTGCTGAATTCATTGTTCAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.6185485720634	3	507.617494	1519.83065	1.8971	0.00096301	0.76872	0.00039022	2.6658	0.0013532	507.6174322642302	42.603	0.58596	44.524	44.165	44.751	1.9211					53	18	4	0	0	0	1.0369	1	17843	17843		1.1098	0.6038	1	7193700			31571	17362	15621	15684	36484	36484					0.0915319274470221
SLFIFPFR	8	Unmodified	_SLFIFPFR_					0	0	0			REV__ENSG00000166930|ENST00000300190|MS4A5	REV__ENSG00000166930|ENST00000300190|MS4A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.7927123904228	2	513.792195	1025.56984	1.5027	0.00077207	-1.3182	-0.00067728	0.18448	9.4784E-05	513.7919052079332	29.898	0.27537	29.898	29.732	30.008	0					20	8	3	0	0	0	0.89152	1	12540	12540		0.69038	0	1	1465200	+		31572	10850	15622	15685	36485	36485					0.05807556036438655
SLFKIWLV	8	Unmodified	_SLFKIWLV_					0	0	0		nc|ENSG00000128607|Q6PID8-2|KLHDC10;ENSG00000128607|ENST00000335420|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3112060427666	2	503.310221	1004.60589	2.3479	0.0011817	0.5169	0.00026016	2.8648	0.0014419	503.31046263154934	83.747	0.67776	83.747	83.504	84.182	0					51	21	3	0	0	0	0.26487	4	34896	34847;34896;34936;34995		74.929	0	1	4558200			31573	2376	15623	15686	36486;36487;36488;36489	36487					0.10377013213326336
SLFKIWLV	8	Unmodified	_SLFKIWLV_					0	0	0		nc|ENSG00000128607|Q6PID8-2|KLHDC10;ENSG00000128607|ENST00000335420|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.3113891482353	2	503.310221	1004.60589	2.771	0.0013947	-0.28373	-0.0001428	2.4873	0.0012519	503.30996028169164	83.12	0.64839	83.39	83.121	83.77	0.27029					56	20	3	0	0	0	0.072211	4	34738	34692;34738;34790;34844		96.285	0	1	5321900			31574	2376	15623	15686	36490;36491;36492;36493	36491					0.10377013213326336
SLFKIWLV	8	Unmodified	_SLFKIWLV_					0	0	0		nc|ENSG00000128607|Q6PID8-2|KLHDC10;ENSG00000128607|ENST00000335420|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3115417361259	2	503.310221	1004.60589	4.0644	0.0020457	-0.77972	-0.00039244	3.2847	0.0016532	503.3097466674393	82.089	0.88271	83.301	82.975	83.858	1.2125					88	27	5	0	0	0	0.072211	6	34426	34380;34426;34464;34503;34545;34600		96.285	0	1	17565000			31575	2376	15623	15686	36494;36495;36496;36497;36498;36499	36495					0.10377013213326336
SLFKIWLV	8	Unmodified	_SLFKIWLV_					0	0	0		nc|ENSG00000128607|Q6PID8-2|KLHDC10;ENSG00000128607|ENST00000335420|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	nc|ENSG00000128607|Q6PID8-2|KLHDC10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3119994997978	2	503.310221	1004.60589	3.6147	0.0018193	-0.54099	-0.00027229	3.0738	0.0015471	503.30983071326654	81.515	0.84113	83.211	82.983	83.824	1.6959					78	26	4	0	0	0	0.15813	6	34189	34144;34189;34228;34267;34306;34352		85.272	0	1	18804000			31576	2376	15623	15686	36500;36501;36502;36503;36504;36505	36501					0.10377013213326336
SLFKLIVKV	9	Unmodified	_SLFKLIVKV_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8555786013603	2	523.852253	1045.68995	2.193	0.0011488	3.3802	0.0017707	5.5731	0.0029195	523.8551125638534	58.769	0.53821	58.769	58.623	59.161	0					24	16	2	0	0	0	0.11483	1	24515	24515		47.594	27.141	1	1021000			31577	1001	15624	15687	36506	36506					0.16893544310232755
SLFKLIVKV	9	Unmodified	_SLFKLIVKV_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.8564941287041	2	523.852253	1045.68995	2.5987	0.0013613	1.3504	0.00070743	3.9491	0.0020688	523.8534965653591	58.168	0.66692	58.491	58.204	58.871	0.32299					35	20	2	0	0	0	0.13191	2	24464	24360;24464		43.772	23.319	1	878860			31578	1001	15624	15687	36507;36508	36508					0.16893544310232755
SLFKLIVKV	9	Unmodified	_SLFKLIVKV_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8558837771416	2	523.852253	1045.68995	1.7579	0.00092089	-0.07343	-3.8466E-05	1.6845	0.00088242	523.852236663383	56.867	0.73436	58.281	58.033	58.767	1.4145					44	24	2	0	0	0	0.062999	4	23768	23768;23817;23885;23977		67.838	39.344	1	2985000			31579	1001	15624	15687	36509;36510;36511;36512	36509					0.16893544310232755
SLFKLIVKV	9	Unmodified	_SLFKLIVKV_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.8527099490166	2	523.852253	1045.68995	1.0896	0.00057077	0.088504	4.6363E-05	1.1781	0.00061713	523.8520463911295	56.279	0.72857	58.248	57.964	58.693	1.9684					46	23	3	0	0	0	0.046032	3	23595	23546;23595;23644		67.838	33.756	1	2876800			31580	1001	15624	15687	36513;36514;36515	36514					0.16893544310232755
SLFKLIVKV	9	Unmodified	_SLFKLIVKV_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	349.5709106326103	3	349.570594	1045.68995	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.189	1	58.157	57.657	58.657	1.9684								0	0	0	0.42693	1	23564	23564		4.897	3.7037	1				31581	1001	15624	15687	36516	36516					0.16893544310232755
SLFNKLVEL	9	Unmodified	_SLFNKLVEL_					0	0	0		nc|ENSG00000138593|Q93073-2|SECISBP2L;ENSG00000138593|ENST00000559471|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	nc|ENSG00000138593|Q93073-2|SECISBP2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8160278201103	2	531.813325	1061.6121	1.9304	0.0010266	3.5777	0.0019027	5.5081	0.0029293	531.8158702653376	66.384	1.0798	68.272	67.388	68.467	1.8889					43	34	2	0	0	0	0.3091	1	27839	27839		24.991	5.552	1	1965600			31582	2836	15625	15688	36517	36517					0.08375486654176711
SLFPFIEKL	9	Unmodified	_SLFPFIEKL_					0	0	0		nc|ENSG00000088280|Q8TDY4-3|ASAP3;ENSG00000088280|ENST00000336689|ASAP3;ENST00000478858.5_1_1:23767870-23768724:-|nuORF	nc|ENSG00000088280|Q8TDY4-3|ASAP3	nc|ENSG00000088280|Q8TDY4-3|ASAP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3188964724541	2	547.318243	1092.62193	1.2836	0.00070253	0.12621	6.9075E-05	1.4098	0.00077161	547.3185304413073	79.909	0.40543	81.626	81.383	81.789	1.7167					22	12	2	0	0	0	0.22861	2	33493	33493;33548		29.841	3.5724	1	1019800			31583	1097	15626	15689	36518;36519	36518					0.07932674659582517
SLFPGKLEV	9	Unmodified	_SLFPGKLEV_					0	0	0		nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;ENST00000580966.1_1_17:18149569-18150009:-|nuORF	nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2887451052666	2	495.286943	988.559333	1.5161	0.00075088	1.8949	0.00093851	3.4109	0.0016894	495.28762289677564	56.5	0.49649	56.5	56.256	56.752	0					37	16	3	0	0	0	0.15456	3	23553	23505;23553;23608		38.176	5.8701	1	4448700			31584	4462	15627	15690	36520;36521;36522	36521					0.0645952859136969
SLFPGKLEV	9	Unmodified	_SLFPGKLEV_					0	0	0		nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;ENST00000580966.1_1_17:18149569-18150009:-|nuORF	nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2879211306572	2	495.286943	988.559333	2.7929	0.0013833	-1.0306	-0.00051043	1.7624	0.00087287	495.28638282186745	55.977	0.48167	56.298	56.078	56.56	0.32088					39	16	3	0	0	0	0.20244	2	23477	23423;23477		32.786	2.2476	1	4417900			31585	4462	15627	15690	36523;36524	36524					0.0645952859136969
SLFPGKLEV	9	Unmodified	_SLFPGKLEV_					0	0	0		nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII;ENST00000580966.1_1_17:18149569-18150009:-|nuORF	nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2898437380791	2	495.286943	988.559333	1.9101	0.00094604	2.7813	0.0013776	4.6914	0.0023236	495.2883912689095	54.212	0.49672	56.18	55.97	56.467	1.9684					35	15	3	0	0	0	0.12216	3	22736	22697;22736;22780		41.956	3.9816	1	5783700			31586	4462	15627	15690	36525;36526;36527	36526					0.0645952859136969
SLFPHNPQFI	10	Unmodified	_SLFPHNPQFI_					0	0	0		ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3132202029228	2	600.314023	1198.61349	2.3074	0.0013852	-1.5723	-0.00094389	0.7351	0.00044129	600.3114219771713	58.45	0.38768	58.45	58.202	58.59	0					16	11	2	0	0	0	0.79268	1	24376	24376		13.042	2.2185	1	365260			31587	1997	15628	15691	36528	36528					0.022131207429310962
SLFPHNPQFI	10	Unmodified	_SLFPHNPQFI_					0	0	0		ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.3166992068291	2	600.314023	1198.61349	1.5703	0.0009427	-0.52252	-0.00031368	1.0478	0.00062902	600.3138503398305	56.688	0.27439	58.102	57.94	58.214	1.4145					13	8	2	0	0	0	0.18015	1	23754	23754		51.415	28.679	1	1208100			31588	1997	15628	15691	36529	36529					0.022131207429310962
SLFPHNPQFI	10	Unmodified	_SLFPHNPQFI_					0	0	0		ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3130981326103	2	600.314023	1198.61349	1.2087	0.00072558	-2.3742	-0.0014253	-1.1656	-0.0006997	600.312088910439	56.097	0.36914	58.066	57.841	58.21	1.9684					17	11	2	0	0	0	0.52861	1	23563	23563		26.268	5.8536	1	1017800			31589	1997	15628	15691	36530	36530					0.022131207429310962
SLFRVITEV	9	Unmodified	_SLFRVITEV_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000534048.1_1_11:44151622-44219579:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	532.3124267458916	2	532.310949	1062.60735	2.1848	0.001163	0.42733	0.00022747	2.6121	0.0013905	532.3110483272636	61.265	0.44176	61.265	61.078	61.52	0					32	13	3	0	0	0	0.014947	2	25568	25518;25568		103.42	20.89	1	6592000			31590	3284	15629	15692	36531;36532	36532					0.07854602511406483
SLFRVITEV	9	Unmodified	_SLFRVITEV_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000534048.1_1_11:44151622-44219579:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	532.3111450076103	2	532.310949	1062.60735	2.2897	0.0012188	-1.0487	-0.00055825	1.241	0.00066057	532.3098249393247	60.606	0.4441	60.934	60.696	61.14	0.32809					39	13	4	0	0	0	0.0037498	1	25386	25386		125.53	32.876	1	7680500			31591	3284	15629	15692	36533	36533					0.07854602511406483
SLFRVITEV	9	Unmodified	_SLFRVITEV_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000534048.1_1_11:44151622-44219579:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3129760622978	2	532.310949	1062.60735	2.552	0.0013585	0.69471	0.0003698	3.2468	0.0017283	532.3111999533851	59.334	0.58612	60.753	60.467	61.053	1.4196					52	18	4	0	0	0	0.0070725	4	24908	24823;24869;24908;24954		114.2	31.672	1	26245000			31592	3284	15629	15692	36534;36535;36536;36537	36536					0.07854602511406483
SLFRVITEV	9	Unmodified	_SLFRVITEV_					0	0	0		ENSG00000151348|ENST00000533608|EXT2;nc|ENSG00000151348|Q93063-2|EXT2;nc|ENSG00000151348|Q93063-3|EXT2;ENST00000534048.1_1_11:44151622-44219579:+|nuORF	ENSG00000151348|ENST00000533608|EXT2	ENSG00000151348|ENST00000533608|EXT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3128539919853	2	532.310949	1062.60735	2.5518	0.0013583	0.28819	0.0001534	2.84	0.0015118	532.3109891030404	58.831	0.55441	60.8	60.544	61.099	1.969					55	17	4	0	0	0	0.014947	3	24636	24636;24686;24725		103.42	20.89	1	21389000			31593	3284	15629	15692	36538;36539;36540	36538					0.07854602511406483
SLFSHSLISI	10	Unmodified	_SLFSHSLISI_					0	0	0		ENSG00000009335|ENST00000348165|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.3088256716728	2	552.308406	1102.60226	1.2161	0.00067166	-0.2727	-0.00015061	0.9434	0.00052105	552.3075371255597	68.659	0.3139	68.659	68.485	68.799	0					15	9	2	0	0	0	0.57775	1	28629	28629		24.021	5.8742	1	609450			31594	537	15630	15693	36541	36541					0.055062986488110255
SLFSHSLISI	10	Unmodified	_SLFSHSLISI_					0	0	0		ENSG00000009335|ENST00000348165|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3094360232353	2	552.308406	1102.60226	1.6553	0.00091423	1.7809	0.00098363	3.4362	0.0018979	552.3092823498024	66.795	0.3464	68.184	67.996	68.343	1.3887					26	10	3	0	0	0	0.059378	1	28000	28000		74.929	13.572	1	2535700			31595	537	15630	15693	36542	36542					0.055062986488110255
SLFSHSLISI	10	Unmodified	_SLFSHSLISI_					0	0	0		ENSG00000009335|ENST00000348165|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3098632693291	2	552.308406	1102.60226	1.6157	0.00089237	1.0138	0.00055993	2.6295	0.0014523	552.3088786160777	66.27	0.34737	68.159	67.994	68.341	1.8889					25	10	3	0	0	0	0.043055	2	27797	27797;27845		81.89	21.096	1	2251400			31596	537	15630	15693	36543;36544	36543					0.055062986488110255
SLFSHSLISI	10	Unmodified	_SLFSHSLISI_					0	0	0		ENSG00000009335|ENST00000348165|UBE3C;nc|ENSG00000009335|Q15386-2|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	ENSG00000009335|ENST00000348165|UBE3C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.308406	1102.60226	1.5905	0.00087842	0.32532	0.00017968	1.9158	0.0010581	552.3080943731696	68.051	0.31638	68.374	68.218	68.534	0.32268	0.029982	-0.00060166	NaN	81.89	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1010200			31597	537	15630	15693							0.055062986488110255
SLFSVLVRV	9	Unmodified	_SLFSVLVRV_					0	0	0		ENST00000496599.3_1_8:21959616-21960439:+|nuORF;ENSG00000158863|ENST00000289921|FHIP2B	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.3183471560478	2	510.316035	1018.61752	2.0101	0.0010258	2.1079	0.0010757	4.118	0.0021015	510.3172733903963	73.594	0.27283	73.594	73.491	73.764	0					14	8	2	0	0	0	0.1388	1	30656	30656		39.95	0	1	888750			31598	3510	15631	15694	36545	36545					0.10895210236674302
SLFSVLVRV	9	Unmodified	_SLFSVLVRV_					0	0	0		ENST00000496599.3_1_8:21959616-21960439:+|nuORF;ENSG00000158863|ENST00000289921|FHIP2B	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3173400759697	2	510.316035	1018.61752	1.9704	0.0010055	1.8045	0.00092087	3.7749	0.0019264	510.3167166632535	71.735	0.65533	73.076	72.842	73.498	1.3415					35	20	3	0	0	0	0.10473	1	30087	30087		47.749	0	1	4036500			31599	3510	15631	15694	36546	36546					0.10895210236674302
SLFSVLVRV	9	Unmodified	_SLFSVLVRV_					0	0	0		ENST00000496599.3_1_8:21959616-21960439:+|nuORF;ENSG00000158863|ENST00000289921|FHIP2B	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	ENST00000496599.3_1_8:21959616-21960439:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.3180724978447	2	510.316035	1018.61752	1.7372	0.00088651	1.4611	0.00074563	3.1983	0.0016321	510.3170549887402	71.246	0.72044	73.07	72.818	73.539	1.824					38	22	3	0	0	0	0.063746	2	29904	29842;29904		62.573	0	1	2802500			31600	3510	15631	15694	36547;36548	36548					0.10895210236674302
SLFTSILAW	9	Unmodified	_SLFTSILAW_					0	0	0			REV__chr13:43055543-43068930|206|12.42|0.22|5.85|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|5	REV__chr13:43055543-43068930|206|12.42|0.22|5.85|+|0|TE_info:LTR19C,LTR19C_dup94,ERV1,LTR,donor,+,43054751,43055543|None,DNAJC15|5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1408569216728	2	519.286943	1036.55933	4.7545	0.002469	-0.36622	-0.00019017	4.3883	0.0022788	519.2867343095363	89.132	0.44228	90.537	90.264	90.707	1.4045					24	13	3	0	0	0	0.11787	1	37443	37443		5.2307	0	1	1576500	+		31601	8254	15632	15695	36549	36549					0.042515285913850676
SLFVDECCVV	10	2 Carbamidomethyl (C)	_SLFVDEC(Carbamidomethyl (C))C(Carbamidomethyl (C))VV_	SLFVDEC(1)C(1)VV		SLFVDEC(55)C(55)VV		0	2	0			REV__nc|ENSG00000205307|Q8TEE9|SAP25	REV__nc|ENSG00000205307|Q8TEE9|SAP25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.2756225466728	2	614.272849	1226.53115	1.9012	0.0011679	1.1283	0.00069311	3.0296	0.001861	614.2741469980715	70.165	0.55229	70.165	69.897	70.449	0					60	17	5	0	0	0	0.15278	2	29230	29180;29230		54.774	16.229	1	11534000	+		31602	11813	15633	15696	36550;36551	36551	19;20				-0.07305905442535732
SLFVDECCVV	10	2 Carbamidomethyl (C)	_SLFVDEC(Carbamidomethyl (C))C(Carbamidomethyl (C))VV_	SLFVDEC(1)C(1)VV		SLFVDEC(48)C(48)VV		0	2	0			REV__nc|ENSG00000205307|Q8TEE9|SAP25	REV__nc|ENSG00000205307|Q8TEE9|SAP25	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	613.8602172732353	2	614.272849	1226.53115	1.9714	0.001211	1.9305	0.0011858	3.9019	0.0023968	614.274943697208	68.316	0.59535	70.186	69.949	70.544	1.87					55	18	5	0	0	0	0.11019	1	28678	28678		48.346	12.219	1	8705800	+		31603	11813	15633	15696	36552	36552	19;20				-0.07305905442535732
SLFVLGAPVS	10	Unmodified	_SLFVLGAPVS_					0	0	0			REV__ENST00000533086.5_1_19:15226257-15226476:-|nuORF	REV__ENST00000533086.5_1_19:15226257-15226476:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2872192263603	2	495.286943	988.559333	2.7929	0.0013833	-1.0306	-0.00051043	1.7624	0.00087287	495.28638282186745	55.977	0.48167	56.298	56.078	56.56	0.32088					39	16	3	0	0	0	0.6819	1	23531	23531		19.257	0	1	4417900	+		31604	13725	15634	15697	36553	36553					0.06459528591381059
SLFVSNIK	8	Unmodified	_SLFVSNIK_					0	0	0			REV__ENST00000272748.8_1_2:176857015-176857093:-|nuORF	REV__ENST00000272748.8_1_2:176857015-176857093:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	454.2672607302666	2	454.26601	906.517468	1.9959	0.00090668	0.33575	0.00015252	2.3317	0.0010592	454.2660900640773	51.474	0.46399	51.474	51.261	51.725	0					43	14	4	0	0	0	0.62137	1	21466	21466		46.021	9.9768	1	13785000	+		31605	12239	15635	15698	36554	36554					0.06046972902845482
SLFWHRREMW	10	Unmodified	_SLFWHRREMW_					0	0	0		ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	ENST00000405315.8_2_19:49403351-49403540:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	724.3559448122978	2	724.356231	1446.69791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.65	1	119.89	119.39	120.39	0.243								0	0	0	0.66166	1	51685	51685		1.6526	0.17072	1				31606	6359	15636	15699	36555	36555					-0.007572517119569966
SLGAYISTL	9	Unmodified	_SLGAYISTL_					0	0	0		nc|ENSG00000179889|Q6P996-2|PDXDC1;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1	nc|ENSG00000179889|Q6P996-2|PDXDC1	nc|ENSG00000179889|Q6P996-2|PDXDC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	924.5056030154228	1	924.503674	923.496398	1.9364	0.0017902	-0.3776	-0.0003491	1.5588	0.0014411	924.5033135540294	59.307	0.41254	59.307	59.068	59.481	0					28	12	3	0	0	0	0.076627	2	24720	24673;24720		57.471	0	1	4645200			31607	4531	15637	15700	36556;36557	36557					0.031589628033202644
SLGAYISTL	9	Unmodified	_SLGAYISTL_					0	0	0		nc|ENSG00000179889|Q6P996-2|PDXDC1;ENST00000570001.5_1_16:15069056-15125764:+|nuORF;nc|ENSG00000179889|Q6P996-4|PDXDC1;nc|ENSG00000179889|Q6P996-5|PDXDC1;ENSG00000179889|ENST00000396410|PDXDC1	nc|ENSG00000179889|Q6P996-2|PDXDC1	nc|ENSG00000179889|Q6P996-2|PDXDC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	924.5046874880791	1	924.503674	923.496398	0.71326	0.00065941	-0.68762	-0.00063571	0.025634	2.3699E-05	924.5028872236843	57.109	0.35877	59.077	58.845	59.203	1.9684					34	19	2	0	0	0	0.042029	1	23993	23993		74.423	0	1	14437000			31608	4531	15637	15700	36558	36558					0.031589628033202644
SLGCLHSVLSL	11	Unmodified	_SLGCLHSVLSL_					0	0	0		ENST00000372980.3_1_20:42815966-42816209:-|nuORF	ENST00000372980.3_1_20:42815966-42816209:-|nuORF	ENST00000372980.3_1_20:42815966-42816209:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3099243044853	2	564.807716	1127.60088	1.52	0.00085853	2.3645	0.0013355	3.8845	0.002194	564.8111681516881	68.757	0.45203	70.61	70.346	70.798	1.853					41	14	4	0	0	0	0.54522	1	28854	28854		22.736	4.5899	1	4083200			31609	6150	15638	15701	36559	36559					0.042183412884014615
SLGEDAHFQ	9	Unmodified	_SLGEDAHFQ_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2276489138603	2	502.227613	1002.44067	4.0077	0.0020128	-2.7174	-0.0013647	1.2903	0.00064803	502.72741635637874	96.29	0.21574	96.711	96.572	96.787	0.4212					16	6	3	0	0	0	0.59203	1	40497	40497		11.64	0	1	6527800			31610	1512	15639	15702	36560	36560					-0.06044870384289425
SLGEDAHFQ	9	Unmodified	_SLGEDAHFQ_					0	0	0		nc|ENSG00000105369|P11912-2|CD79A;ENSG00000105369|ENST00000221972|CD79A	nc|ENSG00000105369|P11912-2|CD79A	nc|ENSG00000105369|P11912-2|CD79A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.227613	1002.44067	4.0077	0.0020128	-2.7174	-0.0013647	1.2903	0.00064803	502.72741635637874	96.29	0.21574	96.711	96.572	96.787	0.4212	0.10786	-0.00052887	NaN	11.64	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6527800			31611	1512	15639	15702							-0.06044870384289425
SLGELSTLV	9	Unmodified	_SLGELSTLV_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5176269412041	1	918.514239	917.506963	1.8007	0.001654	0.48796	0.00044819	2.2887	0.0021022	918.5145038446474	49.39	0.49494	50.781	50.485	50.98	1.3911					25	15	2	0	0	0	0.09539	1	20648	20648		50.855	0	1	1279000	+		31612	9838	15640	15703	36561	36561					0.04490945457769158
SLGELSTLV	9	Unmodified	_SLGELSTLV_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	918.514239	917.506963	1.8007	0.001654	0.48796	0.00044819	2.2887	0.0021022	918.5145038446474	49.39	0.49494	50.781	50.485	50.98	1.3911	0.0022682	0.00025318	NaN	50.855	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1279000	+		31613	9838	15640	15703							0.04490945457769158
SLGELSTLV	9	Unmodified	_SLGELSTLV_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	918.514239	917.506963	1.8376	0.0016879	-0.048935	-4.4947E-05	1.7887	0.0016429	918.5138102089084	48.799	0.46143	50.776	50.637	51.099	1.9772	-0.0022682	-0.00023996	NaN	50.855	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1215100	+		31614	9838	15640	15703							0.04490945457769158
SLGEMTYEMK	10	Unmodified	_SLGEMTYEMK_					0	0	0		tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.8454467654228	3	396.847359	1187.52025	-1.049	-0.00041629	-4.135	-0.001641	-5.184	-0.0020572	396.8457850030678	14.37	0.37082	14.37	14.256	14.627	0					23	11	3	0	0	0	0.69361	1	5966	5966		18.721	11.684	1	1417900			31615	16655	15641	15704	36562	36562					-0.06601307816822555
SLGEMTYEMK	10	Unmodified	_SLGEMTYEMK_					0	0	0		tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	396.847359	1187.52025	0.34388	0.00013647	-7.699	-0.0030553	-7.3551	-0.0029189	396.84342112805393	14.37	0.28141	14.483	14.354	14.635	0.11295	-0.050558	-0.0034658	NaN	18.721	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	373430			31616	16655	15641	15704							-0.06601307816822555
SLGEMTYEMK	10	Unmodified	_SLGEMTYEMK_					0	0	0		tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	396.847359	1187.52025	-0.50342	-0.00019978	-4.8398	-0.0019206	-5.3432	-0.0021204	396.8453124220364	13.928	0.27732	14.655	14.503	14.781	0.72639	0.12111	-6.173E-05	NaN	18.721	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307360			31617	16655	15641	15704							-0.06601307816822555
SLGEMTYEMK	10	Unmodified	_SLGEMTYEMK_					0	0	0		tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	tr|A0A553STL0|A0A553STL0_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_05305PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	396.847359	1187.52025	0.00065064	2.582E-07	-4.4326	-0.0017591	-4.432	-0.0017588	396.8461218574692	13.799	0.1254	14.627	14.548	14.673	0.82789	0.093313	0.00042295	NaN	18.721	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374760			31618	16655	15641	15704							-0.06601307816822555
SLGEVIKSNP	10	Unmodified	_SLGEVIKSNP_					0	0	0		tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7888671755791	2	522.290214	1042.56587	5.9467	0.0031059	3.1735	0.0016575	9.1202	0.0047634	522.2953612884323	88.619	0.87045	89.676	89.337	90.207	1.0562					75	26	4	0	0	0	0.41677	1	37268	37268		32.305	6.9062	1	4739000			31619	16439	15642	15705	36563	36563					0.04629421752088092
SLGEVIKSNP	10	Unmodified	_SLGEVIKSNP_					0	0	0		tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7938720583916	2	522.290214	1042.56587	4.6324	0.0024195	3.2616	0.0017035	7.894	0.004123	522.7924319165911	88.23	0.83099	89.677	89.348	90.179	1.4467					81	25	5	0	0	0	0.5476	1	37205	37205		25.399	1.3787	1	9786300			31620	16439	15642	15705	36564	36564					0.04629421752088092
SLGKFTFDV	9	Unmodified	_SLGKFTFDV_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	508.1082031130791	2	507.26875	1012.52295	2.0771	0.0010537	0.45972	0.0002332	2.5368	0.0012869	507.2689248278775	56.503	0.23504	56.503	56.34	56.575	0					13	7	2	0	0	0	0.11684	1	23557	23557		7.9102	0	1	1311700			31621	752	15643	15706	36565	36565					0.017186516946708252
SLGKFTFDV	9	Unmodified	_SLGKFTFDV_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2696105837822	2	507.26875	1012.52295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.658	1	56.063	55.563	56.563	1.4048								0	0	0	0.03583	1	22874	22874		67.838	31.711	1				31622	752	15643	15706	36566	36566					0.017186516946708252
SLGKFTFDV	9	Unmodified	_SLGKFTFDV_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2696105837822	2	507.26875	1012.52295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.786	1	56.19	55.69	56.69	1.4048								0	0	0	0.03583	1	22928	22928		67.838	31.711	1				31623	752	15643	15706	36567	36567					0.017186516946708252
SLGKFTFDV	9	Unmodified	_SLGKFTFDV_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2697631716728	2	507.26875	1012.52295	1.9152	0.00097153	-0.020837	-1.057E-05	1.8944	0.00096096	507.2689561257078	54.225	0.44083	56.193	55.877	56.318	1.9684					21	13	2	0	0	0	0.043696	2	22678	22678;22733		72.968	33.011	1	2851500			31624	752	15643	15706	36568;36569	36568					0.017186516946708252
SLGKFTFDV	9	Unmodified	_SLGKFTFDV_					0	0	0		ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	ENSG00000061656|ENST00000374273|SPAG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	507.26875	1012.52295	2.4365	0.001236	-0.20035	-0.00010163	2.2362	0.0011343	507.2685929677873	55.945	0.1947	56.266	56.167	56.362	0.32088	-0.054388	-0.00024024	NaN	72.968	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1317000			31625	752	15643	15706							0.017186516946708252
SLGKSIRV	8	Unmodified	_SLGKSIRV_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2736999392509	2	430.271627	858.528701	3.2937	0.0014172	0.051355	2.2097E-05	3.345	0.0014393	430.27169532017444	104.43	0.091354	104.61	104.56	104.65	0.1731					16	4	4	0	0	0	0.89051	1	44178	44178		2.3027	0	1	68984000	+		31626	9912	15644	15707	36570	36570					0.09377794996999
SLGLEIRRQRR	11	Unmodified	_SLGLEIRRQRR_					0	0	0		ENST00000539783.5_2_2:172290933-172291600:+|nuORF	ENST00000539783.5_2_2:172290933-172291600:+|nuORF	ENST00000539783.5_2_2:172290933-172291600:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	461.9498474001884	3	461.947898	1382.82186	1.6972	0.00078402	1.962	0.00090632	3.6591	0.0016903	461.94866283851707	97.272	0.18723	97.272	97.165	97.353	0					17	5	4	0	0	0	1.0391	1	40658	40658		0.40827	0.041592	1	50815000			31627	7211	15645	15708	36571	36571					0.14576542379882085
SLGLFVPILLV	11	Unmodified	_SLGLFVPILLV_					0	0	0		L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|350|3|anti-sense	L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|350|3|anti-sense	L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|350|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	390.9239990115166	3	390.921404	1169.74238	2.615	0.0010222	3.1213	0.0012202	5.7363	0.0022424	390.92255463900545	88.289	0.46437	88.523	88.259	88.723	0.23471					36	14	4	0	0	0	1.0191	1	36973	36973		2.6312	0.88896	1	7539600			31628	7684	15646	15709	36572	36572					0.16430082653187128
SLGLGESLYI	10	Unmodified	_SLGLGESLYI_					0	0	0		nc|ENSG00000062524|P29376-3|LTK;ENST00000563518.5_1_15:41799676-41805922:-|nuORF;nc|ENSG00000062524|P29376-5|LTK;nc|ENSG00000062524|P29376-4|LTK;ENSG00000062524|ENST00000263800|LTK;nc|ENSG00000062524|P29376-2|LTK	nc|ENSG00000062524|P29376-3|LTK	nc|ENSG00000062524|P29376-3|LTK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2892333865166	2	526.28714	1050.55973	2.0359	0.0010715	1.2348	0.00064986	3.2707	0.0017214	526.2880264827048	45.316	0.21922	45.316	45.187	45.406	0					10	6	2	0	0	0	0.47063	1	18964	18964		29.082	0.58707	1	752750			31629	756	15647	15710	36573	36573					0.03646903520575506
SLGLLERR	8	Unmodified	_SLGLLERR_					0	0	0		ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	ENST00000379026.6_1_19:36133589-36134644:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	472.3145934939384	2	472.287808	942.561064	3.0867	0.0014578	3.1977	0.0015102	6.2843	0.002968	472.2892111538219	59.515	0.63237	61.484	61.225	61.858	1.969					51	20	5	0	0	0	2.3239	1	25106	25106		32.117	0	1	42271000			31630	6208	15648	15711	36574	36574					0.0874858239999412
SLGRFEITV	9	Unmodified	_SLGRFEITV_					0	0	0		ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2871581912041	2	511.287474	1020.5604	1.0545	0.00053916	0.187	9.561E-05	1.2415	0.00063477	511.28726796507146	51.426	0.44218	52.82	52.621	53.063	1.3938					26	14	3	0	0	0	0.11669	1	21551	21551		43.772	1.6778	1	4769200			31631	858	15649	15712	36575	36575					0.05093742960286818
SLGRFEITV	9	Unmodified	_SLGRFEITV_					0	0	0		ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2883178591728	2	511.287474	1020.5604	0.43836	0.00022413	1.4243	0.00072824	1.8627	0.00095237	511.28794037171554	50.834	0.42733	52.81	52.515	52.942	1.9753					28	13	3	0	0	0	0.1052	1	21304	21304		47.594	5.7548	1	3941100			31632	858	15649	15712	36576	36576					0.05093742960286818
SLGRFEITV	9	Unmodified	_SLGRFEITV_					0	0	0		ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	ENSG00000070718|ENST00000396926|AP3M2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	511.287474	1020.5604	1.8867	0.00096462	-2.7955	-0.0014293	-0.90881	-0.00046466	511.28622172473575	52.747	0.24564	53.07	52.894	53.14	0.32283	0.16987	-0.0031873	NaN	47.594	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	937230			31633	858	15649	15712							0.05093742960286818
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.2932922244072	2	480.292225	958.569897	2.2151	0.0010639	0.26642	0.00012796	2.4815	0.0011918	480.29218749567997	52.146	0.43303	52.146	51.917	52.35	0					36	13	4	0	0	0	0.065879	2	21779	21739;21779		136.33	25.781	1	6912900	+		31634	15902	15650	15713	36577;36578	36578					0.08895511245816579
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.2935668826103	2	480.292225	958.569897	2.5242	0.0012123	-0.23223	-0.00011154	2.2919	0.0011008	480.2919959026442	51.638	0.40218	51.963	51.726	52.128	0.32554					32	12	4	0	0	0	0.076926	3	21583	21583;21633;21675		136.33	14.799	1	5258600	+		31635	15902	15650	15713	36579;36580;36581	36579					0.08895511245816579
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2937499880791	2	480.292225	958.569897	2.7376	0.0013148	0.29982	0.000144	3.0374	0.0014588	480.2924542247395	50.331	0.40634	51.725	51.518	51.924	1.3938					38	12	4	0	0	0	0.057925	3	21119	21018;21067;21119		149.99	21.152	1	21292000	+		31636	15902	15650	15713	36582;36583;36584	36584					0.08895511245816579
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2931396365166	2	480.292225	958.569897	1.5943	0.00076574	0.81329	0.00039062	2.4076	0.0011564	480.2926967428293	49.766	0.44025	51.743	51.506	51.946	1.9772					38	13	4	0	0	0	0.076088	2	20846	20846;20885		164.52	19.386	1	16721000	+		31637	15902	15650	15713	36585;36586	36585					0.08895511245816579
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	480.292225	958.569897	2.5242	0.0012123	-0.23223	-0.00011154	2.2919	0.0011008	480.2919959026442	51.638	0.40218	51.963	51.726	52.128	0.32554	0.069168	-0.0004601	NaN	164.52	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5258600	+		31638	15902	15650	15713							0.08895511245816579
SLGSILSIGL	10	Unmodified	_SLGSILSIGL_					0	0	0			REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	REV__tr|A0A7D7ACH0|A0A7D7ACH0_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19095PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.292225	958.569897	2.7376	0.0013148	0.29982	0.000144	3.0374	0.0014588	480.2924542247395	50.331	0.40634	51.725	51.518	51.924	1.3938	-0.16954	5.0975E-05	NaN	164.52	38	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21292000	+		31639	15902	15650	15713							0.08895511245816579
SLGTKKANR	9	Unmodified	_SLGTKKANR_					0	0	0			REV__ENST00000492808.5_1_1:26644508-26645120:+|nuORF	REV__ENST00000492808.5_1_1:26644508-26645120:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7919189333916	2	487.790715	973.566878	2.644	0.0012897	-0.21506	-0.00010491	2.4289	0.0011848	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.79362	2	26844	26844;27171		3.5965	0	1	1452800	+		31640	13441	15651	15714	36587;36588	36587					0.0790368091164737
SLGVWEEHFK	10	Unmodified	_SLGVWEEHFK_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;ENST00000472776.1_1_2:122122630-122145458:-|nuORF	nc|ENSG00000074054|Q7Z460-2|CLASP1	nc|ENSG00000074054|Q7Z460-2|CLASP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	411.2083618044853	3	411.208384	1230.60332	-0.26833	-0.00011034	1.6932	0.00069628	1.4249	0.00058594	411.2090610073268	22.69	0.74003	22.69	22.489	23.229	0					46	24	3	0	0	0	0.71237	2	9401	9401;9501		17.863	4.2483	1	2785400			31641	908	15652	15715	36589;36590	36589					-0.0027548698230930313
SLHDAIMIV	9	Unmodified	_SLHDAIMIV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.7711669802666	2	499.770603	997.526652	1.8269	0.00091303	-0.76213	-0.00038089	1.0648	0.00053214	499.77028000931756	52.467	0.37709	52.467	52.287	52.664	0					27	11	3	0	0	0	0.10294	2	21896	21847;21896		48.346	19.859	1	3781300			31642	2678	15653	15716	36591;36592	36592					0.027789981968794564
SLHDAIMIV	9	Unmodified	_SLHDAIMIV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	499.7691528201103	2	499.770603	997.526652	2.3051	0.001152	-1.5872	-0.00079323	0.71791	0.00035879	499.76961950835624	51.896	0.39666	52.221	52.038	52.435	0.32554					28	12	3	0	0	0	0.10294	2	21714	21714;21766		48.346	19.859	1	3804700			31643	2678	15653	15716	36593;36594	36593					0.027789981968794564
SLHDAIMIV	9	Unmodified	_SLHDAIMIV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7719299197197	2	499.770603	997.526652	2.0127	0.0010059	0.82104	0.00041033	2.8338	0.0014162	499.77101245855044	50.553	0.45702	51.947	51.74	52.197	1.3938					43	14	4	0	0	0	0.03795	3	21157	21115;21157;21199		77.984	24.409	1	10373000			31644	2678	15653	15716	36595;36596;36597	36596					0.027789981968794564
SLHDAIMIV	9	Unmodified	_SLHDAIMIV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7718994021416	2	499.770603	997.526652	1.4473	0.00072331	1.4526	0.00072594	2.8998	0.0014493	499.77134099445396	49.985	0.49165	51.962	51.758	52.25	1.9772					37	15	4	0	0	0	0.03795	3	20937	20891;20937;20978		77.984	41.518	1	10932000			31645	2678	15653	15716	36598;36599;36600	36599					0.027789981968794564
SLHDAIMIV	9	Oxidation (M)	_SLHDAIM(Oxidation (M))IV_		SLHDAIM(1)IV		SLHDAIM(67)IV	0	0	1		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7692443728447	2	507.76806	1013.52157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.914	1	43.914	43.414	44.414	0								0	0	0	0.036752	1	18379	18379		67.344	22.937	1				31646	2678	15653	15717	36601	36601		50			0.015346943342706254
SLHDAIMIV	9	Oxidation (M)	_SLHDAIM(Oxidation (M))IV_		SLHDAIM(1)IV		SLHDAIM(74)IV	0	0	1		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7697631716728	2	507.76806	1013.52157	2.3784	0.0012077	-2.1689	-0.0011013	0.20949	0.00010637	507.76812093766745	41.881	0.42651	43.221	43.05	43.476	1.3399					27	13	3	0	0	0	0.042029	2	17594	17538;17594		74.423	23.568	1	2476700			31647	2678	15653	15717	36602;36603	36603		50			0.015346943342706254
SLHDAIMIV	9	Oxidation (M)	_SLHDAIM(Oxidation (M))IV_		SLHDAIM(1)IV		SLHDAIM(64)IV	0	0	1		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;nc|ENSG00000135624|Q99832-2|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7692138552666	2	507.76806	1013.52157	1.9896	0.0010102	-0.85726	-0.00043529	1.1323	0.00057495	507.7682714313107	41.409	0.4224	43.301	43.119	43.541	1.8927					21	13	2	0	0	0	0.059546	2	17379	17327;17379		64.236	22.142	1	2253300			31648	2678	15653	15717	36604;36605	36605		50			0.015346943342706254
SLHDVLFEL	9	Unmodified	_SLHDVLFEL_					0	0	0		ENST00000459908.5_1_13:113439469-113512287:+|nuORF;ENSG00000068650|ENST00000375645|ATP11A	ENST00000459908.5_1_13:113439469-113512287:+|nuORF	ENST00000459908.5_1_13:113439469-113512287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.7894164919853	2	536.787307	1071.56006	2.3455	0.001259	-0.071272	-3.8258E-05	2.2742	0.0012208	536.7881409191772	69.493	0.25094	71.346	71.168	71.419	1.853					18	7	3	0	0	0	0.30098	1	29155	29155		25.399	7.2643	1	1054000			31649	832	15654	15718	36606	36606					0.02714323240434169
SLHEDHMLF	9	Unmodified	_SLHEDHMLF_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.7621948122978	2	564.760766	1127.50698	1.4734	0.00083212	0.56881	0.00032124	2.0422	0.0011534	564.7612809011144	76.026	0.34474	76.026	75.82	76.164	0					27	10	4	0	0	0	0.59203	1	31668	31668		11.64	0.81637	1	2596800	+		31650	9765	15655	15719	36607	36607					-0.0516737781390475
SLHEDHMLF	9	Unmodified	_SLHEDHMLF_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	564.760766	1127.50698	1.4734	0.00083212	0.56881	0.00032124	2.0422	0.0011534	564.7612809011144	76.026	0.34474	76.026	75.82	76.164	0	0.1379	-0.00029689	NaN	11.64	27	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2596800	+		31651	9765	15655	15719							-0.0516737781390475
SLHEDHMLF	9	Unmodified	_SLHEDHMLF_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	564.760766	1127.50698	3.3373	0.0018848	1.5823	0.00089364	4.9196	0.0027784	564.7616480563146	74.495	0.38657	75.813	75.621	76.008	1.318	-0.074946	0.0008479	NaN	11.64	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5838000	+		31652	9765	15655	15719							-0.0516737781390475
SLHEDHMLF	9	Unmodified	_SLHEDHMLF_					0	0	0			REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	REV__ENST00000472623.1_1_X:69646726-69652182:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.760766	1127.50698	3.0257	0.0017088	1.0224	0.00057739	4.048	0.0022862	564.7612956562987	74.046	0.42403	75.842	75.597	76.021	1.7962	-0.046487	0.0002154	NaN	11.64	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3306400	+		31653	9765	15655	15719							-0.0516737781390475
SLHPIVRVV	9	Unmodified	_SLHPIVRVV_					0	0	0		ENSG00000167332|ENST00000396950|OR51E2	ENSG00000167332|ENST00000396950|OR51E2	ENSG00000167332|ENST00000396950|OR51E2	MSMS	GG20161007_CRH_Patient100_W632_01	3	510.3188354372978	2	510.321651	1018.62875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.812	1	73.154	72.654	73.654	1.3415								0	0	0	0.16797	1	30140	30140		28.487	0	1				31654	3965	15656	15720	36608	36608					0.12018032330797723
SLIAGLTIA	9	Unmodified	_SLIAGLTIA_					0	0	0		ENSG00000197747|ENST00000368811|S100A10	ENSG00000197747|ENST00000368811|S100A10	ENSG00000197747|ENST00000368811|S100A10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	858.5286743044853	1	858.529495	857.522219	1.5924	0.0013671	-1.5371	-0.0013196	0.055293	4.747E-05	858.5281118444468	70.909	0.25595	70.909	70.811	71.067	0					13	7	2	0	0	0	0.39927	1	29589	29589		20.454	0	1	550860			31655	5024	15657	15721	36609	36609					0.08775857045611701
SLIASVLVS	9	Unmodified	_SLIASVLVS_					0	0	0			REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	888.5414306521416	1	888.54006	887.532783	2.1717	0.0019297	-1.0576	-0.00093976	1.1141	0.00098993	888.5392023784711	83.241	0.42889	83.241	83.014	83.443	0					35	13	3	0	0	0	0.031324	1	34716	34716		85.357	0	1	7342000	+		31656	10118	15658	15722	36610	36610					0.08451839700057917
SLIASVLVS	9	Unmodified	_SLIASVLVS_					0	0	0			REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	888.5417968630791	1	888.54006	887.532783	2.3053	0.0020483	-0.39007	-0.0003466	1.9152	0.0017017	888.5399246971641	82.715	0.39688	82.985	82.787	83.183	0.27029					33	12	3	0	0	0	0.042029	1	34645	34645		74.423	3.2892	1	9051700	+		31657	10118	15658	15722	36611	36611					0.08451839700057917
SLIASVLVS	9	Unmodified	_SLIASVLVS_					0	0	0			REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	REV__NIPA2|p.T249Lfs*13|1|0.08|ENSG00000140157|chr15:22866509-22866509|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	888.5450927615166	1	888.54006	887.532783	3.1135	0.0027665	-0.21323	-0.00018947	2.9003	0.002577	888.5399209011438	81.242	0.49187	82.938	82.735	83.226	1.6959					37	15	3	0	0	0	0.076627	1	34194	34194		57.471	0	1	21839000	+		31658	10118	15658	15722	36612	36612					0.08451839700057917
SLIDFLRVV	9	Unmodified	_SLIDFLRVV_					0	0	0		ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3248168826103	2	531.321317	1060.62808	4.3013	0.0022854	1.0285	0.00054646	5.3298	0.0028319	531.3217217417879	90.526	0.61006	91.508	91.235	91.846	0.98157					43	18	4	0	0	0	0.0069529	2	38154	38106;38154		114.65	53.292	1	8046700			31659	4089	15659	15723	36613;36614	36614					0.1001919289108173
SLIDFLRVV	9	Unmodified	_SLIDFLRVV_					0	0	0		ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3231078982353	2	531.321317	1060.62808	4.4087	0.0023424	-0.59331	-0.00031524	3.8154	0.0020272	531.320803596743	89.992	0.72163	91.396	91.019	91.74	1.4045					49	22	4	0	0	0	0.015029	2	37943	37894;37943		103.35	51.085	1	6151700			31660	4089	15659	15723	36615;36616	36616					0.1001919289108173
SLIDFLRVV	9	Unmodified	_SLIDFLRVV_					0	0	0		ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	531.321317	1060.62808	2.1272	0.0011302	-1.1538	-0.00061303	0.97342	0.0005172	531.3206655585869	91.841	0.91664	91.841	91.311	92.228	0	0.26619	-0.00097392	NaN	114.65	44	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2243900			31661	4089	15659	15723							0.1001919289108173
SLIDFLRVV	9	Unmodified	_SLIDFLRVV_					0	0	0		ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	ENSG00000169410|ENST00000618819|PTPN9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.321317	1060.62808	2.764	0.0014686	-0.51841	-0.00027544	2.2456	0.0011931	531.3210946966846	91.364	0.61356	91.554	91.335	91.949	0.19041	-0.020655	-0.00029874	NaN	114.65	35	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1848700			31662	4089	15659	15723							0.1001919289108173
SLIDIVTEI	9	Unmodified	_SLIDIVTEI_					0	0	0		ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1002.578601062298	1	1002.57175	1001.56448	4.9083	0.0049209	2.7515	0.0027586	7.6598	0.0076795	1002.5751393622326	90.433	0.38577	91.415	91.173	91.558	0.98157					17	11	2	0	0	0	0.042029	2	38095	38044;38095		74.423	7.0789	1	2114600			31663	834	15660	15724	36617;36618	36618					0.06375787663341725
SLIDIVTEI	9	Unmodified	_SLIDIVTEI_					0	0	0		ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1002.576403796673	1	1002.57175	1001.56448	4.4986	0.0045102	0.42604	0.00042714	4.9247	0.0049373	1002.5699082161462	89.981	0.3426	91.385	91.209	91.552	1.4045					13	10	2	0	0	0	0.042029	1	37896	37896		74.423	7.0789	1	2599200			31664	834	15660	15724	36619	36619					0.06375787663341725
SLIDQFFGV	9	Unmodified	_SLIDQFFGV_					0	0	0		nc|ENSG00000101557|P54578-2|USP14;nc|ENSG00000101557|P54578-3|USP14;ENSG00000101557|ENST00000261601|USP14	nc|ENSG00000101557|P54578-2|USP14	nc|ENSG00000101557|P54578-2|USP14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2695190310478	2	513.26875	1024.52295	2.0185	0.001036	0.26749	0.00013729	2.286	0.0011733	513.2685593140767	94.531	0.49065	94.531	94.212	94.703	0					24	15	2	0	0	0	0.12174	1	39492	39492		42.095	21.641	1	1445400			31665	1356	15661	15725	36620	36620					0.011666516946661432
SLIDQFFGV	9	Unmodified	_SLIDQFFGV_					0	0	0		nc|ENSG00000101557|P54578-2|USP14;nc|ENSG00000101557|P54578-3|USP14;ENSG00000101557|ENST00000261601|USP14	nc|ENSG00000101557|P54578-2|USP14	nc|ENSG00000101557|P54578-2|USP14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2704345583916	2	513.26875	1024.52295	2.8382	0.0014568	-0.46588	-0.00023912	2.3724	0.0012177	513.268450636948	94.223	0.53487	94.368	94.068	94.603	0.14494					28	16	3	0	0	0	0.15635	2	39408	39408;39459		37.974	22.127	1	1212800			31666	1356	15661	15725	36621;36622	36621					0.011666516946661432
SLIDQFFGV	9	Unmodified	_SLIDQFFGV_					0	0	0		nc|ENSG00000101557|P54578-2|USP14;nc|ENSG00000101557|P54578-3|USP14;ENSG00000101557|ENST00000261601|USP14	nc|ENSG00000101557|P54578-2|USP14	nc|ENSG00000101557|P54578-2|USP14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2701904177666	2	513.26875	1024.52295	4.4632	0.0022908	-1.0429	-0.0005353	3.4202	0.0017555	513.2681569540715	93.488	0.51221	94.36	94.097	94.609	0.87176					35	15	3	0	0	0	0.059546	1	39339	39339		64.236	28.192	1	3543300			31667	1356	15661	15725	36623	36623					0.011666516946661432
SLIDQFFGV	9	Unmodified	_SLIDQFFGV_					0	0	0		nc|ENSG00000101557|P54578-2|USP14;nc|ENSG00000101557|P54578-3|USP14;ENSG00000101557|ENST00000261601|USP14	nc|ENSG00000101557|P54578-2|USP14	nc|ENSG00000101557|P54578-2|USP14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	513.26875	1024.52295	3.6213	0.0018587	0.12527	6.4297E-05	3.7465	0.001923	513.2686722380747	93.094	0.54012	94.371	94.07	94.61	1.277	-0.036696	0.00049453	NaN	64.236	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2402300			31668	1356	15661	15725							0.011666516946661432
SLIDSTWLP	9	Unmodified	_SLIDSTWLP_					0	0	0		ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2739135622978	2	516.274032	1030.53351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.591	1	26.275	25.775	26.775	1.6845								0	0	0	0.42693	1	10273	10273		4.756	0.81161	1				31669	6192	15662	15726	36624	36624					0.01946634349087617
SLIEGYISL	9	Unmodified	_SLIEGYISL_					0	0	0		ENSG00000274070|ENST00000616305|CASTOR2	ENSG00000274070|ENST00000616305|CASTOR2	ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	994.5430786013603	1	994.545539	993.538263	1.8217	0.0018118	-0.89215	-0.00088729	0.92956	0.00092449	994.5455353771939	76.359	0.49133	76.359	76.164	76.656	0					24	15	2	0	0	0	0.10993	1	31804	31804		46.021	0	1	1523100			31670	5453	15663	15727	36625	36625					0.04123518491860523
SLIEGYISL	9	Unmodified	_SLIEGYISL_					0	0	0		ENSG00000274070|ENST00000616305|CASTOR2	ENSG00000274070|ENST00000616305|CASTOR2	ENSG00000274070|ENST00000616305|CASTOR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5516845583916	1	994.545539	993.538263	4.2488	0.0042257	3.3255	0.0033074	7.5744	0.0075331	994.5510858014783	74.945	0.4965	76.251	76.028	76.524	1.3063					27	15	3	0	0	0	0.033794	1	31454	31454		81.613	0	1	2956700			31671	5453	15663	15727	36626	36626					0.04123518491860523
SLIEKLNVL	9	Unmodified	_SLIEKLNVL_					0	0	0			REV__tr|A0A553SLP7|A0A553SLP7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21045PE=4SV=1	REV__tr|A0A553SLP7|A0A553SLP7_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21045PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.2887451052666	2	514.82115	1027.62775	2.7782	0.0014303	2.4915	0.0012827	5.2697	0.002713	514.8224295853929	77.316	0.31713	78.597	78.346	78.663	1.2809					15	9	2	0	0	0	0.067699	1	32409	32409		23.148	0	1	486880	+		31672	14992	15664	15728	36627	36627					0.11503773171239118
SLIENQILL	9	Unmodified	_SLIENQILL_					0	0	0		nc|ENSG00000151718|Q6AWC2-2|WWC2;ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2;nc|ENSG00000151718|Q6AWC2-5|WWC2;nc|ENSG00000151718|Q6AWC2-3|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.2486450076103	2	521.810782	1041.60701	3.0885	0.0016116	-0.81037	-0.00042286	2.2781	0.0011887	521.8113947200309	70.853	0.34312	72.206	72.002	72.345	1.3536					15	10	2	0	0	0	0.095205	1	29720	29720		25.399	1.3787	1	3206200			31673	3298	15665	15729	36628	36628					0.08787182791570558
SLIENQILL	9	Unmodified	_SLIENQILL_					0	0	0		nc|ENSG00000151718|Q6AWC2-2|WWC2;ENSG00000151718|ENST00000403733|WWC2;nc|ENSG00000151718|Q6AWC2-6|WWC2;nc|ENSG00000151718|Q6AWC2-5|WWC2;nc|ENSG00000151718|Q6AWC2-3|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	nc|ENSG00000151718|Q6AWC2-2|WWC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.2480956912041	2	521.810782	1041.60701	1.7197	0.00089735	-0.65276	-0.00034062	1.0669	0.00055673	521.8110663331396	70.355	0.24617	72.193	72.073	72.319	1.8378					12	7	2	0	0	0	0.08828	1	29522	29522		28.487	8.0332	1	1781900			31674	3298	15665	15729	36629	36629					0.08787182791570558
SLIFDTVPT	9	Unmodified	_SLIFDTVPT_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.5173522830009	3	331.514814	991.522613	4.1291	0.0013689	2.9535	0.00097914	7.0826	0.002348	331.5158464374725	89.132	0.38055	90.537	90.264	90.645	1.4045					20	11	2	0	0	0	0.61249	1	37564	37564		7.1017	0.89594	1	1421000	+		31675	10986	15666	15730	36630	36630					0.026512319748235313
SLIFDTVPT	9	Unmodified	_SLIFDTVPT_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	331.514814	991.522613	3.9475	0.0013086	3.1338	0.0010389	7.0812	0.0023475	331.51598374107454	89.524	0.37572	90.544	90.333	90.708	1.0199	0.0035133	8.5844E-05	NaN	7.1017	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899660	+		31676	10986	15666	15730							0.026512319748235313
SLIFDTVPT	9	Unmodified	_SLIFDTVPT_					0	0	0			REV__ENSG00000170426|ENST00000293502|SDR9C7	REV__ENSG00000170426|ENST00000293502|SDR9C7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	331.514814	991.522613	4.1291	0.0013689	2.9535	0.00097914	7.0826	0.002348	331.5158464374725	89.132	0.38055	90.537	90.264	90.645	1.4045	-0.0035133	-9.3419E-05	NaN	7.1017	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1421000	+		31677	10986	15666	15730							0.026512319748235313
SLIFIYDP	8	Unmodified	_SLIFIYDP_					0	0	0		SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	323.1758911013603	3	323.176021	966.506234	1.6789	0.00054257	-1.2177	-0.00039354	0.46115	0.00014903	323.1752035465046	62.915	0.43309	64.86	64.688	65.121	1.9444					33	13	4	0	0	0	0.68174	1	26425	26425		25.399	0	1	1108000			31678	15962	15667	15731	36631	36631					0.021641508086986505
SLIFIYDP	8	Unmodified	_SLIFIYDP_					0	0	0		SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	323.176021	966.506234	1.2587	0.00040678	-3.3472	-0.0010817	-2.0885	-0.00067495	323.1745899547918	64.654	0.21532	64.98	64.884	65.099	0.32689	0.052748	-0.0016896	NaN	25.399	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377280			31679	15962	15667	15731							0.021641508086986505
SLIFIYDP	8	Unmodified	_SLIFIYDP_					0	0	0		SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	SLC4A9|p.A543Pfs*16|1|0.63|ENSG00000113073|chr5:140364528-140364529|-/CCTGCTCTTCTCTTTCAGCAGGTAGGAGA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	323.176021	966.506234	1.1269	0.00036419	-1.293	-0.00041787	-0.1661	-5.3679E-05	323.1756417989218	63.53	0.30248	64.943	64.753	65.055	1.4134	0.01534	0.000302	NaN	25.399	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	972410			31680	15962	15667	15731							0.021641508086986505
SLIFKLEEL	9	Unmodified	_SLIFKLEEL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3213378787041	2	546.320983	1090.62741	1.3586	0.00074223	-0.96916	-0.00052947	0.38944	0.00021276	546.3208027510938	71.264	0.72895	71.264	70.907	71.636	0					46	20	4	0	0	0	0.1388	1	29666	29666		39.95	5.548	1	2450300			31681	998	15668	15732	36632	36632					0.08572353451381787
SLIFKLEEL	9	Unmodified	_SLIFKLEEL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3221313357353	2	546.320983	1090.62741	1.3729	0.00075004	-0.53222	-0.00029076	0.84067	0.00045927	546.3213293240884	70.622	0.81504	70.946	70.679	71.494	0.32359					61	25	4	0	0	0	0.15456	2	29595	29547;29595		38.176	7.2478	1	2302400			31682	998	15668	15732	36633;36634	36634					0.08572353451381787
SLIFKLEEL	9	Unmodified	_SLIFKLEEL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3210327029228	2	546.320983	1090.62741	2.0351	0.0011118	-0.65632	-0.00035856	1.3788	0.00075327	546.3205157778893	69.436	0.9348	70.801	70.381	71.316	1.3657					60	30	4	0	0	0	0.014947	2	29138	29138;29187		103.42	34.315	1	10306000			31683	998	15668	15732	36635;36636	36635					0.08572353451381787
SLIFKLEEL	9	Unmodified	_SLIFKLEEL_					0	0	0		ENSG00000080189|ENST00000372230|SLC35C2;nc|ENSG00000080189|Q9NQQ7-3|SLC35C2;nc|ENSG00000080189|Q9NQQ7-2|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	ENSG00000080189|ENST00000372230|SLC35C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3211547732353	2	546.320983	1090.62741	1.3333	0.0007284	-0.83628	-0.00045688	0.497	0.00027152	546.3204890355256	68.832	1.0481	70.685	70.088	71.136	1.853					58	28	3	0	0	0	0.0080484	2	28888	28888;28943		110.55	34.792	1	9338500			31684	998	15668	15732	36637;36638	36637					0.08572353451381787
SLIFKRSW	8	Unmodified	_SLIFKRSW_					0	0	0			REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	REV__tr|A0A7D6ZFJ2|A0A7D6ZFJ2_9CLOTFibronectintypeIIIdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.8044311404228	2	518.800552	1035.58655	1.7113	0.00088784	4.3818	0.0022733	6.0931	0.0031611	518.802519775853	83.5	0.33705	85.138	85.01	85.347	1.6379					18	10	2	0	0	0	0.7528	1	35015	35015		25.399	0.72543	1	2237800	+		31685	15631	15669	15733	36639	36639					0.07018056922424876
SLIGHLQTL	9	Unmodified	_SLIGHLQTL_					0	0	0		ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.2914306521416	2	491.290017	980.565481	1.8365	0.00090224	1.8763	0.0009218	3.7128	0.001824	491.29056612189714	49.23	0.28417	49.23	49.064	49.348	0					21	8	3	0	0	0	0.099302	2	20526	20526;20579		49.554	15.153	1	1326600			31686	2821	15670	15734	36640;36641	36640					0.07442046822893644
SLIGHLQTL	9	Unmodified	_SLIGHLQTL_					0	0	0		ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	ENSG00000138166|ENST00000369583|DUSP5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	491.290017	980.565481	2.426	0.0011919	-0.68922	-0.00033861	1.7368	0.00085328	491.2867035548547	48.688	0.31191	49.018	48.821	49.133	0.33034	-0.10619	-0.002353	NaN	49.554	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1039300			31687	2821	15670	15734							0.07442046822893644
SLIHELVGQ	9	Unmodified	_SLIHELVGQ_					0	0	0			REV__ENSG00000101003|ENST00000262460|GINS1	REV__ENSG00000101003|ENST00000262460|GINS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	498.4819518923759	2	498.279649	994.544745	2.337	0.0011645	-2.3195	-0.0011557	0.01758	8.76E-06	498.27997517085953	50.067	0.31327	50.397	50.263	50.576	0.33019					26	9	4	0	0	0	0.086272	1	20951	20951		30.637	1.555	1	1605700	+		31688	9020	15671	15735	36642	36642					0.04725456443236453
SLIHELVGQ	9	Unmodified	_SLIHELVGQ_					0	0	0			REV__ENSG00000101003|ENST00000262460|GINS1	REV__ENSG00000101003|ENST00000262460|GINS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2802307009697	2	498.279649	994.544745	1.2552	0.00062542	-0.9862	-0.0004914	0.26896	0.00013402	498.27990093700333	48.691	0.36759	50.079	49.895	50.263	1.388					31	11	3	0	0	0	0.066815	2	20422	20374;20422		61.357	18.721	1	2869700	+		31689	9020	15671	15735	36643;36644	36644					0.04725456443236453
SLIHELVGQ	9	Unmodified	_SLIHELVGQ_					0	0	0			REV__ENSG00000101003|ENST00000262460|GINS1	REV__ENSG00000101003|ENST00000262460|GINS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2816345095634	2	498.279649	994.544745	2.0982	0.0010455	0.36781	0.00018327	2.466	0.0012288	498.27989873218894	48.182	0.33819	50.16	49.959	50.297	1.9772					19	10	2	0	0	0	0.091139	2	20200	20150;20200		52.268	10.429	1	2944100	+		31690	9020	15671	15735	36645;36646	36646					0.04725456443236453
SLIHELVGQ	9	Unmodified	_SLIHELVGQ_					0	0	0			REV__ENSG00000101003|ENST00000262460|GINS1	REV__ENSG00000101003|ENST00000262460|GINS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	498.279649	994.544745	1.2552	0.00062542	-0.9862	-0.0004914	0.26896	0.00013402	498.27990093700333	48.691	0.36759	50.079	49.895	50.263	1.388	-0.13324	-0.00070692	NaN	61.357	31	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2869700	+		31691	9020	15671	15735							0.04725456443236453
SLIHELVGQ	9	Unmodified	_SLIHELVGQ_					0	0	0			REV__ENSG00000101003|ENST00000262460|GINS1	REV__ENSG00000101003|ENST00000262460|GINS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	498.279649	994.544745	2.0982	0.0010455	0.36781	0.00018327	2.466	0.0012288	498.27989873218894	48.182	0.33819	50.16	49.959	50.297	1.9772	-0.052119	0.00064243	NaN	61.357	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2944100	+		31692	9020	15671	15735							0.04725456443236453
SLIHGLWNL	9	Unmodified	_SLIHGLWNL_					0	0	0		ENST00000454132.5_1_7:156572396-156619437:-|nuORF;LMBR1L|p.G167Vfs*62|1|0.04|ENSG00000139636|chr12:49103751-49103751|T/-|frameshift_variant;nc|ENSG00000105983|Q8WVP7-2|LMBR1;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;nc|ENSG00000139636|Q6UX01-5|LMBR1L;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;LMBR1-PTPRN2|4|fusion;nc|ENSG00000139636|Q6UX01-2|LMBR1L;ENSG00000139636|ENST00000267102|LMBR1L;ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1;LMBR1-PTPRN2|1|fusion;LMBR1-PTPRN2|2|fusion;LMBR1-PTPRN2|3|fusion	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.7979614138603	2	526.798009	1051.58147	1.7151	0.00090349	-1.1941	-0.00062904	0.52098	0.00027445	526.7968862325706	70.257	0.30663	70.257	70.087	70.394	0					16	9	2	0	0	0	0.17276	1	29251	29251		36.127	16.87	1	1270700			31693	1552	15672	15736	36647	36647					0.05773753059793307
SLIHGLWNL	9	Unmodified	_SLIHGLWNL_					0	0	0		ENST00000454132.5_1_7:156572396-156619437:-|nuORF;LMBR1L|p.G167Vfs*62|1|0.04|ENSG00000139636|chr12:49103751-49103751|T/-|frameshift_variant;nc|ENSG00000105983|Q8WVP7-2|LMBR1;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;nc|ENSG00000139636|Q6UX01-5|LMBR1L;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;LMBR1-PTPRN2|4|fusion;nc|ENSG00000139636|Q6UX01-2|LMBR1L;ENSG00000139636|ENST00000267102|LMBR1L;ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1;LMBR1-PTPRN2|1|fusion;LMBR1-PTPRN2|2|fusion;LMBR1-PTPRN2|3|fusion	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.7981445193291	2	526.798009	1051.58147	1.4952	0.00078769	-2.5829	-0.0013607	-1.0877	-0.00057298	526.7962158389828	69.631	0.40775	69.953	69.752	70.16	0.32224					25	12	3	0	0	0	0.091139	2	29166	29112;29166		52.268	21.632	1	1700700			31694	1552	15672	15736	36648;36649	36649					0.05773753059793307
SLIHGLWNL	9	Unmodified	_SLIHGLWNL_					0	0	0		ENST00000454132.5_1_7:156572396-156619437:-|nuORF;LMBR1L|p.G167Vfs*62|1|0.04|ENSG00000139636|chr12:49103751-49103751|T/-|frameshift_variant;nc|ENSG00000105983|Q8WVP7-2|LMBR1;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;nc|ENSG00000139636|Q6UX01-5|LMBR1L;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;LMBR1-PTPRN2|4|fusion;nc|ENSG00000139636|Q6UX01-2|LMBR1L;ENSG00000139636|ENST00000267102|LMBR1L;ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1;LMBR1-PTPRN2|1|fusion;LMBR1-PTPRN2|2|fusion;LMBR1-PTPRN2|3|fusion	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7993652224541	2	526.798009	1051.58147	2.2575	0.0011892	-2.5624	-0.0013499	-0.30492	-0.00016063	526.7960695288727	68.415	0.51952	69.793	69.583	70.103	1.3778					47	16	4	0	0	0	0.045797	2	28683	28683;28740		71.134	29.039	1	4294200			31695	1552	15672	15736	36650;36651	36650					0.05773753059793307
SLIHGLWNL	9	Unmodified	_SLIHGLWNL_					0	0	0		ENST00000454132.5_1_7:156572396-156619437:-|nuORF;LMBR1L|p.G167Vfs*62|1|0.04|ENSG00000139636|chr12:49103751-49103751|T/-|frameshift_variant;nc|ENSG00000105983|Q8WVP7-2|LMBR1;ENST00000547670.5_1_12:49494396-49503620:-|nuORF;nc|ENSG00000139636|Q6UX01-5|LMBR1L;ENST00000550867.5_1_12:49494935-49504419:-|nuORF;nc|ENSG00000139636|Q6UX01-3|LMBR1L;nc|ENSG00000139636|Q6UX01-4|LMBR1L;LMBR1-PTPRN2|4|fusion;nc|ENSG00000139636|Q6UX01-2|LMBR1L;ENSG00000139636|ENST00000267102|LMBR1L;ENSG00000105983|ENST00000353442|LMBR1;nc|ENSG00000105983|Q8WVP7-3|LMBR1;LMBR1-PTPRN2|1|fusion;LMBR1-PTPRN2|2|fusion;LMBR1-PTPRN2|3|fusion	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	ENST00000454132.5_1_7:156572396-156619437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7987548708916	2	526.798009	1051.58147	2.1105	0.0011118	-0.95269	-0.00050187	1.1578	0.00060993	526.7973344682722	67.799	0.39964	69.669	69.458	69.858	1.87					32	12	3	0	0	0	0.037761	2	28422	28422;28473		78.149	36.055	1	3326900			31696	1552	15672	15736	36652;36653	36652					0.05773753059793307
SLIISKLLM	9	Unmodified	_SLIISKLLM_					0	0	0		tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3242065310478	2	509.322471	1016.63039	3.0756	0.0015665	0.16214	8.2581E-05	3.2378	0.0016491	509.32271327798026	69.904	1.2932	71.257	70.99	72.284	1.3536					110	40	6	0	0	0	0.17276	1	29463	29463		36.127	7.0454	1	55780000			31697	16860	15673	15737	36654	36654					0.12273905304550681
SLIISKLLM	9	Unmodified	_SLIISKLLM_					0	0	0		tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	tr|A0A7D6VSA2|A0A7D6VSA2_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_15310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3243591189384	2	509.322471	1016.63039	2.2575	0.0011498	0.56105	0.00028575	2.8185	0.0014355	509.3229050537749	69.383	0.94395	71.236	70.92	71.864	1.853					81	29	5	0	0	0	0.12251	1	29214	29214		41.84	7.4379	1	37004000			31698	16860	15673	15737	36655	36655					0.12273905304550681
SLILIDHRL	9	Unmodified	_SLILIDHRL_					0	0	0		OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3325683474541	2	540.332216	1078.64988	2.3295	0.0012587	-1.1631	-0.00062845	1.1664	0.00063024	540.3315143904704	70.262	0.5119	72.1	71.655	72.167	1.8378					23	15	2	0	0	0	0.70108	1	29451	29451		7.2892	1.5574	1	1428300			31699	8046	15674	15738	36656	36656					0.11369997639667417
SLILIDHRL	9	Unmodified	_SLILIDHRL_					0	0	0		OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	OR6M1|p.W48L|1|0.06|ENSG00000196099|chr11:123806207-123806207|C/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	540.332216	1078.64988	3.0852	0.0016671	-5.3806	-0.0029073	-2.2954	-0.0012403	540.3290471290902	70.757	0.40279	72.11	72.002	72.405	1.3536	0.0050588	-0.003391	NaN	7.2892	16	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	984900			31700	8046	15674	15738							0.11369997639667417
SLILIILHRK	10	Unmodified	_SLILIILHRK_					0	0	0		ENST00000296422.11_1_4:103911031-103940882:-|nuORF	ENST00000296422.11_1_4:103911031-103940882:-|nuORF	ENST00000296422.11_1_4:103911031-103940882:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1205.827197253704	1	1205.80924	1204.80196	2.7531	0.0033198	-0.17896	-0.00021579	2.5742	0.003104	1205.810463942532	108.03	0.077415	108.19	108.16	108.24	0.15781					16	10	2	0	0	0	0.89803	1	46617	46617		0	0	1	48477000			31701	5734	15675	15739	36657	36657					0.2077539838719531
SLILIILHRK	10	Unmodified	_SLILIILHRK_					0	0	0		ENST00000296422.11_1_4:103911031-103940882:-|nuORF	ENST00000296422.11_1_4:103911031-103940882:-|nuORF	ENST00000296422.11_1_4:103911031-103940882:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4089233279228	2	603.408258	1204.80196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.12	1	111.28	110.78	111.78	0.16445								0	0	0	0.66264	1	48232	48232		0	0	1				31702	5734	15675	15739	36658	36658					0.2077539838719531
SLILLLVYSL	10	Unmodified	_SLILLLVYSL_					0	0	0			REV__tr|A0A553STG9|A0A553STG9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04755PE=4SV=1	REV__tr|A0A553STG9|A0A553STG9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_04755PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5791198611259	3	378.577526	1132.71075	0.50186	0.00018999	2.7899	0.0010562	3.2917	0.0012462	378.5788022668036	28.964	0.753	30.763	30.298	31.051	1.7987					82	24	6	0	0	0	0.89803	1	12215	12215		0.69767	0.23933	1	143200000	+		31703	15240	15676	15740	36659	36659					0.1497008989922506
SLIMRRGF	8	Unmodified	_SLIMRRGF_					0	0	0		tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	tr|A0A553SS01|A0A553SS01_NIACIThuA-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_01995PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	327.1891662478447	3	327.188378	978.543305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.498	1	55.467	54.967	55.967	1.9697								0	0	0	1.0178	1	22414	22414		1.6526	0	1				31704	16586	15677	15741	36660	36660					0.05317543873502473
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.8147155642509	2	507.813325	1013.6121	2.7439	0.0013934	0.41991	0.00021323	3.1638	0.0016066	507.81322498446	85.275	0.44034	85.275	85.068	85.508	0					36	13	4	0	0	0	0.062288	2	35509	35509;35558		129.77	40.372	1	8714600			31705	2752	15678	15742	36661;36662	36661					0.1058348665419544
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1014.621752917767	1	1014.61937	1013.6121	2.5234	0.0025603	-0.29074	-0.00029499	2.2327	0.0022653	1014.6183135003016	85.304	0.31738	85.304	85.1	85.417	0					18	9	3	0	0	0	0.058152	1	35526	35526		92.653	38.821	1	1475300			31706	2752	15678	15742	36663	36663					0.1058348665419544
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.8149291872978	2	507.813325	1013.6121	2.8188	0.0014314	0.69546	0.00035317	3.5143	0.0017846	507.81338462293314	84.822	0.44564	85.083	84.822	85.268	0.26083					37	13	4	0	0	0	0.058152	3	35426	35426;35465;35506		142.08	45.969	1	7747500			31707	2752	15678	15742	36664;36665;36666	36664					0.1058348665419544
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1014.624560534954	1	1014.61937	1013.6121	2.8651	0.002907	-1.2634	-0.0012819	1.6018	0.0016252	1014.6181451430931	84.832	0.25357	85.093	84.951	85.204	0.26083					11	7	2	0	0	0	0.066851	1	35455	35455		110.67	41.57	1	1394500			31708	2752	15678	15742	36667	36667					0.1058348665419544
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8135864138603	2	507.813325	1013.6121	1.7593	0.00089338	-1.6312	-0.00082834	0.12809	6.5044E-05	507.81241603052536	83.974	0.4484	85.161	84.89	85.339	1.1879					41	14	4	0	0	0	0.065687	4	35227	35191;35227;35264;35307		129.77	44.131	1	27377000			31709	2752	15678	15742	36668;36669;36670;36671	36669					0.1058348665419544
SLINVGLISV	10	Unmodified	_SLINVGLISV_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8113891482353	2	507.813325	1013.6121	1.7282	0.00087761	-2.1596	-0.0010966	-0.43133	-0.00021904	507.81235639953877	83.511	0.46181	85.149	84.918	85.38	1.6379					41	14	4	0	0	0	0.06208	4	34980	34980;35017;35066;35111		129.77	40.372	1	20738000			31710	2752	15678	15742	36672;36673;36674;36675	36672					0.1058348665419544
SLIPAQQKV	9	Unmodified	_SLIPAQQKV_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	491.8690978884697	2	492.297842	982.581131	1.7171	0.00084532	1.0474	0.00051564	2.7645	0.001361	492.29851656970396	47.059	0.34983	47.059	46.863	47.213	0					17	10	2	0	0	0	0.11654	1	19660	19660		14.838	0	1	770820	+		31711	9126	15679	15743	36676	36676					0.08914333339942004
SLIPHPFGV	9	Unmodified	_SLIPHPFGV_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.7746459841728	2	483.774003	965.533452	2.0652	0.00099907	0.87071	0.00042123	2.9359	0.0014203	483.77455733496964	58.412	0.38848	58.412	58.17	58.559	0					18	11	2	0	0	0	0.28226	1	24361	24361		26.341	8.2063	1	1082800			31712	1021	15680	15744	36677	36677					0.04930679139761196
SLIPHPFGV	9	Unmodified	_SLIPHPFGV_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.7769653201103	2	483.774003	965.533452	3.1561	0.0015269	2.3803	0.0011515	5.5364	0.0026784	483.7744644460984	57.853	0.38285	58.176	57.949	58.332	0.32299					21	11	2	0	0	0	0.11911	2	24218	24218;24264		42.968	24.833	1	822890			31713	1021	15680	15744	36678;36679	36678					0.04930679139761196
SLIPHPFGV	9	Unmodified	_SLIPHPFGV_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.7747985720634	2	483.774003	965.533452	1.5261	0.00073826	0.38206	0.00018483	1.9081	0.00092309	483.7740001110822	56.634	0.30617	58.048	57.908	58.214	1.4145					16	9	2	0	0	0	0.098957	1	23742	23742		49.669	24.995	1	2627000			31714	1021	15680	15744	36680	36680					0.04930679139761196
SLIPHPFGV	9	Unmodified	_SLIPHPFGV_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.7751037478447	2	483.774003	965.533452	1.0503	0.00050811	0.58947	0.00028517	1.6398	0.00079327	483.7740150132017	56.104	0.40001	58.073	57.841	58.241	1.9684					19	12	2	0	0	0	0.098957	2	23512	23512;23561		49.669	19.444	1	1830700			31715	1021	15680	15744	36681;36682	36681					0.04930679139761196
SLIPIISGV	9	Unmodified	_SLIPIISGV_					0	0	0		ENSG00000127526|ENST00000595753|SLC35E1;nc|ENSG00000127526|Q96K37-3|SLC35E1;ENST00000488894.1_1_19:16677303-16683001:-|nuORF	ENSG00000127526|ENST00000595753|SLC35E1	ENSG00000127526|ENST00000595753|SLC35E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	898.5621215701103	1	898.560795	897.553519	3.6808	0.0033074	-1.1926	-0.0010716	2.4882	0.0022358	898.5603216243859	82.072	0.24963	83.285	83.162	83.411	1.2125					10	7	2	0	0	0	0.029093	1	34473	34473		88.904	10.754	1	835370			31716	2339	15681	15745	36683	36683					0.10064430079728481
SLIPVALGV	9	Unmodified	_SLIPVALGV_					0	0	0			REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7806884646416	2	434.778754	867.542954	1.1132	0.00048401	2.131	0.0009265	3.2442	0.0014105	434.7797830887938	22.286	0.73875	22.509	22.173	22.912	0.223					48	24	3	0	0	0	0.77526	1	9285	9285		4.3292	2.0265	1	4334400	+		31717	10484	15682	15746	36684	36684					0.10388447425293634
SLIPVALGV	9	Unmodified	_SLIPVALGV_					0	0	0			REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7813598513603	2	434.778754	867.542954	1.3199	0.00057385	3.391	0.0014743	4.7109	0.0020482	434.78029569288907	26.076	0.96563	26.337	25.93	26.896	0.26173					59	31	2	0	0	0	0.83213	2	10849	10849;10900		2.0598	0	1	2804000	+		31718	10484	15682	15746	36685;36686	36685					0.10388447425293634
SLIPVALGV	9	Unmodified	_SLIPVALGV_					0	0	0			REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7781249880791	2	434.778754	867.542954	1.1425	0.00049674	1.2468	0.0005421	2.3894	0.0010388	434.7790835448415	21.242	0.68525	22.367	22.043	22.728	1.1254					40	22	2	0	0	0	0.83213	1	8867	8867		2.0598	0	1	2478500	+		31719	10484	15682	15746	36687	36687					0.10388447425293634
SLIPVALGV	9	Unmodified	_SLIPVALGV_					0	0	0			REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	REV__USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7813293337822	2	434.778754	867.542954	0.67204	0.00029219	2.9356	0.0012764	3.6077	0.0015685	434.78023561423674	24.448	1.124	26.133	25.662	26.786	1.6845					79	37	3	0	0	0	0.83213	1	10269	10269		2.0598	0	1	3403500	+		31720	10484	15682	15746	36688	36688					0.10388447425293634
SLIQRLMSV	9	Unmodified	_SLIQRLMSV_					0	0	0		USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant;nc|ENSG00000115464|Q70CQ2-3|USP34;nc|ENSG00000115464|Q70CQ2-2|USP34;ENSG00000115464|ENST00000398571|USP34;XPO1-USP34|2|fusion;XPO1-USP34|3|fusion	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	USP34|p.K3306Nfs*3|1|0.18|ENSG00000115464|chr2:61189025-61189025|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	523.7223998904228	2	523.804977	1045.5954	2.1228	0.001112	2.968	0.0015546	5.0908	0.0026666	523.8059531601439	64.561	0.35045	66.489	66.233	66.583	1.928					13	10	2	0	0	0	0.10091	1	27086	27086		33.445	14.083	1	400610			31721	1922	15683	15747	36689	36689					0.07442662496578123
SLIRIVPVV	9	Unmodified	_SLIRIVPVV_					0	0	0		ENSG00000143970|ENST00000435504|ASXL2;nc|ENSG00000143970|Q76L83-2|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	ENSG00000143970|ENST00000435504|ASXL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	498.7333862185478	2	498.334227	994.653902	2.8245	0.0014076	0.13608	6.7811E-05	2.9606	0.0014754	498.33435866649575	62.161	0.19269	63.579	63.459	63.652	1.4177					9	5	2	0	0	0	0.10337	1	26061	26061		22.658	9.6156	1	343500			31722	3060	15684	15748	36690	36690					0.15636087133373167
SLIRKRKKRRR	11	Unmodified	_SLIRKRKKRRR_					0	0	0			REV__tr|A0A7D7ACN9|A0A7D7ACN9_9CLOTCapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20020PE=3SV=1	REV__tr|A0A7D7ACN9|A0A7D7ACN9_9CLOTCapAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	749.0950805544853	2	749.007859	1496.00117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.9	1	98.156	97.656	98.656	0.25636								0	0	0	0.63775	1	41189	41189		1.3295	1.3295	1		+		31723	15903	15685	15749	36691	36691					0.273004714584431
SLIRNLEQL	9	Unmodified	_SLIRNLEQL_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;ENST00000593854.5_1_19:7709481-7711320:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3196899294853	2	543.319306	1084.62406	1.7238	0.00093659	-1.8975	-0.0010309	-0.17366	-9.4353E-05	543.3180959985187	53.279	0.32149	53.279	53.044	53.365	0					19	12	2	0	0	0	0.093705	1	22216	22216		51.415	14.909	1	1477300			31724	952	15686	15750	36692	36692					0.08513103397376653
SLIRNLEQL	9	Unmodified	_SLIRNLEQL_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;ENST00000593854.5_1_19:7709481-7711320:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3182861208916	2	543.319306	1084.62406	1.727	0.00093832	-2.3597	-0.0012821	-0.63267	-0.00034374	543.3179697594663	52.64	0.30371	52.963	52.742	53.046	0.32283					19	10	2	0	0	0	0.056421	1	22057	22057		65.474	17.879	1	2100800			31725	952	15686	15750	36693	36693					0.08513103397376653
SLIRNLEQL	9	Unmodified	_SLIRNLEQL_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;ENST00000593854.5_1_19:7709481-7711320:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3196288943291	2	543.319306	1084.62406	0.63557	0.00034532	0.65914	0.00035812	1.2947	0.00070344	543.319529411641	51.333	0.57034	52.727	52.377	52.948	1.3938					34	18	2	0	0	0	0.0037498	1	21522	21522		125.53	43	1	10824000			31726	952	15686	15750	36694	36694					0.08513103397376653
SLIRNLEQL	9	Unmodified	_SLIRNLEQL_					0	0	0		nc|ENSG00000076944|Q15833-2|STXBP2;ENSG00000076944|ENST00000221283|STXBP2;nc|ENSG00000076944|Q15833-3|STXBP2;ENST00000601061.1_1_19:7710099-7712134:+|nuORF;ENST00000593854.5_1_19:7709481-7711320:+|nuORF	nc|ENSG00000076944|Q15833-2|STXBP2	nc|ENSG00000076944|Q15833-2|STXBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3195678591728	2	543.319306	1084.62406	0.4167	0.0002264	0.51363	0.00027907	0.93034	0.00050547	543.3194495604405	50.685	0.51445	52.66	52.336	52.851	1.9753					29	16	2	0	0	0	0.00030345	2	21238	21238;21296		137.42	48.47	1	11344000			31727	952	15686	15750	36695;36696	36695					0.08513103397376653
SLIRPKSRPQE	11	Unmodified	_SLIRPKSRPQE_					0	0	0		nc|ENSG00000030419|Q9UKS7-8|IKZF2;ENST00000484040.1_1_2:213872086-213878776:-|nuORF;nc|ENSG00000030419|Q9UKS7-4|IKZF2;nc|ENSG00000030419|Q9UKS7-7|IKZF2;ENST00000412444.5_1_2:213872086-213945912:-|nuORF;nc|ENSG00000030419|Q9UKS7-2|IKZF2;ENSG00000030419|ENST00000434687|IKZF2;ERBB4-IKZF2|1|fusion;ERBB4-IKZF2|2|fusion	nc|ENSG00000030419|Q9UKS7-8|IKZF2	nc|ENSG00000030419|Q9UKS7-8|IKZF2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.1993286013603	4	328.443935	1309.74663	-0.5913	-0.00019421	0.50993	0.00016748	-0.081363	-2.6723E-05	328.44406824929354	31.629	0.39804	32.911	32.743	33.141	1.2813					21	12	2	0	0	0	0.14606	1	13245	13245		1.0136	0.4504	1	2164500			31728	634	15687	15751	36697	36697					0.10414940128794115
SLIRSVVAL	9	Unmodified	_SLIRSVVAL_					0	0	0		ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	ENSG00000103035|ENST00000219313|PSMD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.3116027712822	2	479.30821	956.601866	1.8125	0.00086874	2.7919	0.0013382	4.6044	0.0022069	479.3097340869678	50.69	0.24388	52.084	51.924	52.168	1.3938					12	7	2	0	0	0	0.3091	1	21214	21214		24.991	7.8781	1	1236700			31729	1411	15688	15752	36698	36698					0.12182923719615246
SLISLLTTKG	10	Unmodified	_SLISLLTTKG_					0	0	0			REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3232299685478	2	516.818607	1031.62266	2.0484	0.0010586	3.0355	0.0015688	5.0839	0.0026274	517.3217650854848	54.471	0.49566	56.44	56.255	56.751	1.9684					51	16	4	0	0	0	0.44465	1	22798	22798		30.637	0	1	11192000	+		31730	8070	15689	15753	36699	36699					0.108114693086236
SLISLLTTKG	10	Unmodified	_SLISLLTTKG_					0	0	0			REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	516.818607	1031.62266	1.7374	0.00089794	3.649	0.0018859	5.3865	0.0027838	517.3219799607049	55	0.48789	56.405	56.182	56.67	1.4048	-0.017173	0.0002782	NaN	30.637	47	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13126000	+		31731	8070	15689	15753							0.108114693086236
SLISLLTTKG	10	Unmodified	_SLISLLTTKG_					0	0	0			REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	REV__ABCA9|p.N528S|1|0.82|ENSG00000154258|chr17:69028567-69028567|T/C|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	516.818607	1031.62266	2.0484	0.0010586	3.0355	0.0015688	5.0839	0.0026274	517.3217650854848	54.471	0.49566	56.44	56.255	56.751	1.9684	0.017173	-0.00035599	NaN	30.637	51	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11192000	+		31732	8070	15689	15753							0.108114693086236
SLISSFPLL	9	Unmodified	_SLISSFPLL_					0	0	0		ENSG00000244067|ENST00000493422|GSTA2;ENSG00000243955|ENST00000334575|GSTA1;ENSG00000182793|ENST00000370989|GSTA5	ENSG00000244067|ENST00000493422|GSTA2	ENSG00000244067|ENST00000493422|GSTA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7898437380791	2	488.789318	975.564084	4.7316	0.0023128	-3.1682	-0.0015486	1.5634	0.00076417	488.78768258271816	89.099	0.4434	90.504	90.233	90.677	1.4045					33	13	3	0	0	0	0.19075	1	37487	37487		34.102	0	1	3332200			31733	4628	15690	15754	36700	36700					0.075324127341446
SLISTILEV	9	Unmodified	_SLISTILEV_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5789062380791	1	974.576839	973.569563	2.6794	0.0026113	-0.29075	-0.00028335	2.3887	0.002328	974.5771734382256	91.161	0.39017	91.351	91.108	91.498	0.19042					17	11	2	0	0	0	0.026628	1	38171	38171		92.822	0	1	2122300			31734	2756	15691	15755	36701	36701					0.08172091525955238
SLISTILEV	9	Unmodified	_SLISTILEV_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7942687869072	2	487.792058	973.569563	4.3148	0.0021047	0.79929	0.00038989	5.114	0.0024946	487.79200263723646	89.789	0.31883	91.193	91.081	91.4	1.4045					20	9	3	0	0	0	0.026628	1	37833	37833		92.822	11.209	1	1736000			31735	2756	15691	15755	36702	36702					0.08172091525955238
SLISTILEV	9	Unmodified	_SLISTILEV_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	974.576839	973.569563	4.3701	0.004259	-1.6979	-0.0016548	2.6722	0.0026042	974.5746184899269	90.304	0.57574	91.286	91.014	91.59	0.98157	-0.099596	-0.00059784	NaN	92.822	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4512200			31736	2756	15691	15755							0.08172091525955238
SLISTILEV	9	Unmodified	_SLISTILEV_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	974.576839	973.569563	4.1174	0.0040128	-3.6521	-0.0035593	0.4653	0.00045347	974.5730795931684	89.851	0.47719	91.256	90.923	91.4	1.4045	-0.12944	-0.0025024	NaN	92.822	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3285200			31737	2756	15691	15755							0.08172091525955238
SLITISKSI	9	Unmodified	_SLITISKSI_					0	0	0			REV__tr|A0A7D6VMM9|A0A7D6VMM9_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14240PE=3SV=1	REV__tr|A0A7D6VMM9|A0A7D6VMM9_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14240PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.3025390505791	2	481.30005	960.585547	2.6489	0.0012749	0.30728	0.00014789	2.9562	0.0014228	481.30049326989155	77.113	0.38334	78.394	78.217	78.601	1.2809					26	11	3	0	0	0	0.49082	1	32339	32339		15.847	0	1	4495000	+		31738	15319	15692	15756	36703	36703					0.1036779776285357
SLITISKSI	9	Unmodified	_SLITISKSI_					0	0	0			REV__tr|A0A7D6VMM9|A0A7D6VMM9_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14240PE=3SV=1	REV__tr|A0A7D6VMM9|A0A7D6VMM9_9CLOTIronABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14240PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	481.30005	960.585547	2.6489	0.0012749	0.30728	0.00014789	2.9562	0.0014228	481.30049326989155	77.113	0.38334	78.394	78.217	78.601	1.2809	0	0	NaN	15.847	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4495000	+		31739	15319	15692	15756							0.1036779776285357
SLITIVGLK	9	Unmodified	_SLITIVGLK_					0	0	0		L1M4c_dup1405|chr7:66688108-66688812:+|1.034909646104515|0.2989432249510264|1.79|428.0|35|1|anti-sense	L1M4c_dup1405|chr7:66688108-66688812:+|1.034909646104515|0.2989432249510264|1.79|428.0|35|1|anti-sense	L1M4c_dup1405|chr7:66688108-66688812:+|1.034909646104515|0.2989432249510264|1.79|428.0|35|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.2105895876884	3	315.211066	942.611368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.594	1	37.412	36.912	37.912	1.8176								0	0	0	0.42693	1	14927	14927		0.23584	0	1				31740	7682	15693	15757	36704	36704					0.13776692005149016
SLITLAKEV	9	Unmodified	_SLITLAKEV_					0	0	0			REV__ATAD2|p.A1317T|1|0.05|ENSG00000156802|chr8:123325946-123325946|C/T|missense_variant	REV__ATAD2|p.A1317T|1|0.05|ENSG00000156802|chr8:123325946-123325946|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.3037902712822	2	487.30005	972.585547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.939	1	91.344	90.844	91.844	1.4045								0	0	0	0.092123	1	37888	37888		36.044	0	1		+		31741	8146	15694	15758	36705	36705					0.09815797762848888
SLITLARYTL	10	Unmodified	_SLITLARYTL_					0	0	0		ENST00000534532.6_1_11:134094237-134094411:-|nuORF	ENST00000534532.6_1_11:134094237-134094411:-|nuORF	ENST00000534532.6_1_11:134094237-134094411:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8455688357353	2	575.845156	1149.67576	1.3664	0.00078685	-1.6455	-0.00094757	-0.27912	-0.00016073	575.843704600643	71.038	1.4163	72.861	72.154	73.57	1.8239					89	45	3	0	0	0	0.85124	1	30011	30011		6.7232	0	1	1907700			31742	7191	15695	15759	36706	36706					0.10690847091291289
SLITLIEKV	9	Unmodified	_SLITLIEKV_					0	0	0		nc|ENSG00000108582|O75976-2|CPD;CPD-NSRP1|2|fusion;ENSG00000108582|ENST00000225719|CPD;CPD-NSRP1|1|fusion	nc|ENSG00000108582|O75976-2|CPD	nc|ENSG00000108582|O75976-2|CPD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.3242980837822	2	508.323525	1014.6325	1.9883	0.0010107	2.4631	0.001252	4.4514	0.0022627	508.3241193130136	73.234	0.34485	73.234	73.027	73.372	0					23	10	3	0	0	0	0.036104	1	30509	30509		79.596	14.361	1	1585600			31743	369	15696	15760	36707	36707					0.1257665731400266
SLITRLLEV	9	Unmodified	_SLITRLLEV_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3274413943291	2	522.326599	1042.63865	2.0875	0.0010904	-0.40412	-0.00021108	1.6834	0.00087928	522.3263244389494	75.514	0.94832	75.514	75.216	76.164	0					81	29	4	0	0	0	0.033489	4	31381	31381;31427;31465;31578		81.915	22.547	1	17884000			31744	5225;8062	15697	15761	36708;36709;36710;36711	36708					0.11903175545512568
SLITRLLEV	9	Unmodified	_SLITRLLEV_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3280517458916	2	522.326599	1042.63865	2.7445	0.0014335	-0.43438	-0.00022689	2.3101	0.0012066	522.3263710368084	74.927	0.88034	75.252	74.958	75.838	0.32464					73	27	4	0	0	0	0.019071	5	31380	31260;31304;31342;31380;31419		100.09	23.247	1	24961000			31745	5225;8062	15697	15761	36712;36713;36714;36715;36716	36715					0.11903175545512568
SLITRLLEV	9	Unmodified	_SLITRLLEV_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3282958865166	2	522.326599	1042.63865	3.6208	0.0018912	-1.2544	-0.00065522	2.3664	0.001236	522.3261115834214	73.767	1.1753	75.085	74.654	75.829	1.318					99	37	4	0	0	0	0.025926	5	30891	30891;30940;30979;31018;31062		93.938	27.184	1	37542000			31746	5225;8062	15697	15761	36717;36718;36719;36720;36721	36717					0.11903175545512568
SLITRLLEV	9	Unmodified	_SLITRLLEV_					0	0	0		ENSG00000213639|ENST00000395366|PPP1CB;ENST00000464273.1_1_2:28974903-28999853:+|nuORF;PPP1CB-PLB1|3|fusion;PPP1CB-PLB1|4|fusion;PPP1CB-PLB1|7|fusion;PPP1CB-PLB1|8|fusion;PPP1CB-PLB1|5|fusion;PPP1CB-PLB1|6|fusion	ENSG00000213639|ENST00000395366|PPP1CB;PPP1CB-PLB1|3|fusion	ENSG00000213639|ENST00000395366|PPP1CB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3278076052666	2	522.326599	1042.63865	2.5655	0.0013401	-0.52635	-0.00027493	2.0392	0.0010651	522.3265712049769	73.227	1.1278	75.037	74.543	75.671	1.8101					105	35	5	0	0	0	0.027721	6	30642	30642;30678;30717;30756;30796;30842		91.085	26.843	1	41221000			31747	5225;8062	15697	15761	36722;36723;36724;36725;36726;36727	36722					0.11903175545512568
SLITSELIV	9	Unmodified	_SLITSELIV_					0	0	0		ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5794555544853	1	974.576839	973.569563	2.5846	0.0025189	-1.5752	-0.0015352	1.0093	0.00098369	974.5756426049686	79.965	0.4027	81.216	81.048	81.45	1.2512					19	12	2	0	0	0	0.059546	1	33549	33549		64.236	3.8468	1	1669600			31748	2775	15698	15762	36728	36728					0.0817209152594387
SLITVTTVAL	10	Unmodified	_SLITVTTVAL_					0	0	0			REV__tr|A0A553SM20|A0A553SM20_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_21750PE=4SV=1	REV__tr|A0A553SM20|A0A553SM20_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_21750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3145019412041	2	509.313158	1016.61176	2.9777	0.0015166	-0.88924	-0.0004529	2.0885	0.0010637	509.312373936103	76.229	0.40913	77.996	77.813	78.222	1.7672					27	12	3	0	0	0	0.81324	1	31988	31988		10.824	0	1	1550000	+		31749	15003	15699	15763	36729	36729					0.10412066934327413
SLKGKAKV	8	Unmodified	_SLKGKAKV_					0	0	0		nc|ENSG00000133401|O15018-2|PDZD2;ENSG00000133401|ENST00000438447|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	MSMS	GG20161007_CRH_Patient100_W632_02	4	415.7757751345634	2	415.776545	829.538538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.8	1	45.744	45.244	46.244	1.9438								0	0	0	1.0178	1	18365	18365		0.6015	0	1				31750	2571	15700	15764	36730	36730					0.11694983002360004
SLKKFEKR	8	Unmodified	_SLKKFEKR_					0	0	0			REV__tr|A0A553SFP5|A0A553SFP5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09280PE=3SV=1	REV__tr|A0A553SFP5|A0A553SFP5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09280PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1396362185478	2	518.319109	1034.62366	1.8324	0.00094974	-0.41524	-0.00021523	1.4171	0.00073451	518.3197772211427	69.112	1.0015	69.112	68.673	69.675	0					43	31	2	0	0	0	2.3239	1	28741	28741		2.5775	0	1	713000	+		31751	14713	15701	15765	36731	36731					0.10773728468188892
SLKKKKKKKK	10	Unmodified	_SLKKKKKKKK_					0	0	0		AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|3|1|sense;AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|11|3|sense	AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|3|1|sense	AluSx_dup30022|chr5:14515214-14515541:-|1.4450296212314755|0.0062677388586443|7.85|429.0|3|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	415.3032104372978	3	415.30273	1242.88636	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.31	1	34.135	33.635	34.635	1.8246								0	0	0	0.66264	1	13543	13543		0	0	1				31752	37	15702	15766	36732	36732					0.27463349203958387
SLKKKQTT	8	Unmodified	_SLKKKQTT_					0	0	0		TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant;nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-6|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-5|TACC2	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	933.5757324099541	1	933.572757	932.565481	2.796	0.0026103	0.46222	0.00043151	3.2583	0.0030418	933.5728624783362	107.73	0.1812	107.78	107.68	107.86	0.052452					29	9	4	0	0	0	0.88587	1	46122	46122		5.2307	0	1	203950000			31753	2820	15703	15767	36733	36733					0.09650046822901004
SLKKKQTT	8	Unmodified	_SLKKKQTT_					0	0	0		TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant;nc|ENSG00000138162|O95359-3|TACC2;ENSG00000138162|ENST00000369005|TACC2;nc|ENSG00000138162|O95359-6|TACC2;nc|ENSG00000138162|O95359-1|TACC2;nc|ENSG00000138162|O95359-5|TACC2	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	TACC2|p.S2567Ifs*13|1|0.16|ENSG00000138162|chr10:122226455-122226456|-/A|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	933.572757	932.565481	1.1487	0.0010724	1.9397	0.0018109	3.0884	0.0028832	933.5741923720557	107.78	0.17738	107.78	107.65	107.82	0	-0.030534	0.0012165	NaN	5.2307	30	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	275420000			31754	2820	15703	15767							0.09650046822901004
SLKKLGKQ	8	Unmodified	_SLKKLGKQ_					0	0	0		ESPL1|p.G999Afs*12|1|0.05|ENSG00000135476|chr12:53283456-53283457|-/CCTCTCACACTCCCTGT|frameshift_variant;nc|ENSG00000135476|Q14674-2|ESPL1;ENSG00000135476|ENST00000257934|ESPL1	ESPL1|p.G999Afs*12|1|0.05|ENSG00000135476|chr12:53283456-53283457|-/CCTCTCACACTCCCTGT|frameshift_variant	ESPL1|p.G999Afs*12|1|0.05|ENSG00000135476|chr12:53283456-53283457|-/CCTCTCACACTCCCTGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2003967165947	3	301.19916	900.575651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.28	1	104.34	103.84	104.84	0.059502								0	0	0	1.0178	1	43935	43935		0.40072	0	1				31755	2670	15704	15768	36734	36734					0.12138654548141403
SLKKPKHKR	9	Unmodified	_SLKKPKHKR_					0	0	0		ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	ENSG00000152217|ENST00000649279|SETBP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5807678103447	3	374.580375	1120.7193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.434	1	44.76	44.26	45.26	0.32674								0	0	0	0.42693	1	18658	18658		0.23584	0	1				31756	3314	15705	15769	36735	36735					0.1637650137906803
SLKKQRSRSIL	11	Unmodified	_SLKKQRSRSIL_					0	0	0		nc|ENSG00000144677|O15194-2|CTDSPL;ENSG00000144677|ENST00000273179|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.2769958376884	3	439.277132	1314.80957	1.9816	0.00087046	0.15141	6.651E-05	2.133	0.00093697	439.27663371785746	89.154	0.38097	89.154	89.019	89.4	0					19	11	3	0	0	0	1.0366	1	37284	37284		0.40827	0	1	751760			31757	3089	15706	15770	36736	36736					0.16475505916855582
SLKKQRSRSIL	11	Unmodified	_SLKKQRSRSIL_					0	0	0		nc|ENSG00000144677|O15194-2|CTDSPL;ENSG00000144677|ENST00000273179|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	439.277132	1314.80957	3.0597	0.001344	-2.0744	-0.00091125	0.98524	0.00043279	439.27575599540046	89.054	0.51449	89.278	89.036	89.551	0.22359	0.016036	-0.00026313	NaN	0.40827	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	783900			31758	3089	15706	15770							0.16475505916855582
SLKKQRSRSIL	11	Unmodified	_SLKKQRSRSIL_					0	0	0		nc|ENSG00000144677|O15194-2|CTDSPL;ENSG00000144677|ENST00000273179|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	nc|ENSG00000144677|O15194-2|CTDSPL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	439.277132	1314.80957	5.8005	0.002548	-3.4605	-0.0015201	2.34	0.0010279	439.2751623979262	88.298	0.44959	89.354	89.176	89.626	1.0562	0.091798	-0.0020897	NaN	0.40827	14	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556290			31759	3089	15706	15770							0.16475505916855582
SLKKTIAENRR	11	Unmodified	_SLKKTIAENRR_					0	0	0		tr|A0A7D6ZWC6|A0A7D6ZWC6_9CLOTCobalttransportproteinCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=3SV=1	tr|A0A7D6ZWC6|A0A7D6ZWC6_9CLOTCobalttransportproteinCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=3SV=1	tr|A0A7D6ZWC6|A0A7D6ZWC6_9CLOTCobalttransportproteinCbiMOS=ClostridiumintestinaleOX=36845GN=cbiMPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	658.3959838747978	2	658.393867	1314.77318	2.9742	0.0019582	2.1215	0.0013968	5.0957	0.003355	658.39546179586	101.21	0.12458	101.38	101.27	101.39	0.17032					5	3	2	0	0	0	0.97491	1	42591	42591		5.2969	0.39987	1	2233000			31760	17168	15707	15771	36737	36737					0.12838629020120607
SLKLEDVAL	9	Unmodified	_SLKLEDVAL_					0	0	0		ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	ENSG00000165650|ENST00000334464|PDZD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2906677126884	2	494.289682	986.564812	2.1173	0.0010466	1.6425	0.00081189	3.7599	0.0018585	494.29043595208395	45.525	0.28775	46.9	46.735	47.023	1.3751					19	8	3	0	0	0	0.50272	1	19045	19045		15.248	0	1	1445500			31761	3850	15708	15772	36738	36738					0.07099207383191697
SLKLKLTA	8	Unmodified	_SLKLKLTA_					0	0	0		ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant;nc|ENSG00000121270|Q96J66-2|ABCC11;ENSG00000121270|ENST00000356608|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2913085818291	2	437.292028	872.569503	1.8543	0.00081086	-2.3709	-0.0010368	-0.51658	-0.0002259	437.29106217091197	89.786	0.3171	89.786	89.62	89.937	0					11	9	2	0	0	0	0.89198	1	37530	37530		0	0	1	431840			31762	8	15709	15773	36739	36739					0.1281213631658602
SLKLKLTA	8	Unmodified	_SLKLKLTA_					0	0	0		ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant;nc|ENSG00000121270|Q96J66-2|ABCC11;ENSG00000121270|ENST00000356608|ABCC11;ENST00000567385.5_1_16:48244807-48265838:-|nuORF	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	ABCC11|p.L919Ffs*2|1|0.5|ENSG00000121270|chr16:48187379-48187379|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	437.292028	872.569503	3.05	0.0013337	-2.4047	-0.0010516	0.64523	0.00028215	437.2910730904998	89.671	0.41637	89.894	89.615	90.032	0.22359	0.05423	-1.9164E-05	NaN	0	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	398310			31763	8	15709	15773							0.1281213631658602
SLKSTLVRQ	9	Unmodified	_SLKSTLVRQ_					0	0	0		ENST00000463824.1_1_2:203749090-203749249:-|nuORF	ENST00000463824.1_1_2:203749090-203749249:-|nuORF	ENST00000463824.1_1_2:203749090-203749249:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3157836794853	2	516.314023	1030.61349	2.5726	0.0013283	1.0898	0.00056268	3.6624	0.0018909	516.3145113483018	83.981	0.61716	83.981	83.689	84.306	0					71	19	5	0	0	0	0.84195	1	35064	35064		1.6526	0	1	135590000			31764	6689	15710	15774	36740	36740					0.0994112074295117
SLKTKGVLVS	10	Unmodified	_SLKTKGVLVS_					0	0	0		tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3284179568291	2	516.326599	1030.63865	2.7118	0.0014002	0.37835	0.00019535	3.0901	0.0015955	516.3267431005206	84.803	0.31853	85.063	84.919	85.237	0.26083					22	9	3	0	0	0	0.82019	1	35467	35467		10.074	0	1	2599700			31765	17243	15711	15775	36741	36741					0.12455175545505881
SLKTKGVLVS	10	Unmodified	_SLKTKGVLVS_					0	0	0		tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	tr|A0A7D7A1S6|A0A7D7A1S6_9CLOTPLP-dependentaminotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3268310427666	2	516.326599	1030.63865	1.6482	0.00085102	-1.637	-0.00084524	0.01119	5.7776E-06	516.3257045731144	83.958	0.32086	85.146	84.987	85.307	1.1879					25	10	3	0	0	0	0.85124	1	35288	35288		6.7232	0	1	8939700			31766	17243	15711	15775	36742	36742					0.12455175545505881
SLLAARPRRQ	10	Unmodified	_SLLAARPRRQ_					0	0	0		ENST00000451237.2_1_6:33244956-33245115:+|nuORF	ENST00000451237.2_1_6:33244956-33245115:+|nuORF	ENST00000451237.2_1_6:33244956-33245115:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3590576052666	2	584.357088	1166.69962	1.8497	0.0010809	-0.65371	-0.000382	1.196	0.00069888	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	0.85604	1	30220	30220		6.2058	0	1	3000400			31767	6610	15712	15776	36743	36743					0.12294125368293862
SLLARPKTI	9	Unmodified	_SLLARPKTI_					0	0	0			REV__ENSG00000104549|ENST00000265896|SQLE	REV__ENSG00000104549|ENST00000265896|SQLE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.7231628298759	2	499.821484	997.628415	2.449	0.0012241	1.1613	0.00058044	3.6103	0.0018045	500.3244813145405	59.298	0.24683	61.267	61.099	61.345	1.969					10	7	2	0	0	0	0.10339	1	24882	24882		14.838	9.1064	1	397640	+		31768	9139	15713	15777	36744	36744					0.1295061261095043
SLLDDLHSA	9	Unmodified	_SLLDDLHSA_					0	0	0		ENSG00000162378|ENST00000294353|ZYG11B;nc|ENSG00000162378|Q9C0D3-2|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	ENSG00000162378|ENST00000294353|ZYG11B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.7472717165947	2	485.745639	969.476725	2.2213	0.001079	0.17485	8.4933E-05	2.3961	0.0011639	485.74558581401834	44.155	0.2822	46.099	45.957	46.239	1.9438					14	8	2	0	0	0	0.15635	1	18516	18516		37.974	16.227	1	863770			31769	3614	15714	15778	36745	36745					-0.009234132074311674
SLLDEFYKL	9	Unmodified	_SLLDEFYKL_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.3034545779228	2	564.30279	1126.59103	1.4009	0.0007905	0.029303	1.6536E-05	1.4302	0.00080704	564.3027413994774	79.699	0.40131	79.699	79.485	79.887	0					40	12	4	0	0	0	0.037098	3	33197	33149;33197;33256		78.728	26.46	1	6548500			31770	2661	15715	15779	36746;36747;36748	36747					0.032794765546668714
SLLDEFYKL	9	Unmodified	_SLLDEFYKL_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.3038818240166	2	564.30279	1126.59103	1.6275	0.00091842	0.53492	0.00030186	2.1625	0.0012203	564.3030620377624	79.118	0.46863	79.418	79.217	79.686	0.30047					44	14	5	0	0	0	0.015029	2	33100	33057;33100		103.35	51.085	1	7593600			31771	2661	15715	15779	36749;36750	36750					0.032794765546668714
SLLDEFYKL	9	Unmodified	_SLLDEFYKL_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3032714724541	2	564.30279	1126.59103	2.637	0.001488	-1.4978	-0.00084524	1.1391	0.00064281	564.3020476377795	78.267	0.54206	79.534	79.244	79.787	1.2668					54	17	4	0	0	0	0.0069529	4	32826	32782;32826;32864;32913		114.65	49.414	1	15874000			31772	2661	15715	15779	36751;36752;36753;36754	36752					0.032794765546668714
SLLDEFYKL	9	Unmodified	_SLLDEFYKL_					0	0	0		nc|ENSG00000135387|Q14444-2|CAPRIN1;ENSG00000135387|ENST00000341394|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	nc|ENSG00000135387|Q14444-2|CAPRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3027221560478	2	564.30279	1126.59103	1.4304	0.00080717	-1.2161	-0.00068626	0.21427	0.00012091	564.3021760254337	77.758	0.42325	79.509	79.261	79.684	1.7514					45	13	4	0	0	0	0.010279	3	32604	32558;32604;32659		107.19	55.605	1	18256000			31773	2661	15715	15779	36755;36756;36757	36756					0.032794765546668714
SLLDGHFVL	9	Unmodified	_SLLDGHFVL_					0	0	0		ENST00000535644.1_1_11:67163166-67165027:+|nuORF;ENST00000538013.5_1_11:67160139-67164890:+|nuORF;ENSG00000172613|ENST00000307980|RAD9A	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7784911990166	2	500.776742	999.538931	1.5504	0.00077639	2.1411	0.0010722	3.6915	0.0018486	500.77780435876343	71.221	0.34779	71.221	71.035	71.383	0					21	10	3	0	0	0	0.075994	1	29664	29664		74.423	26.077	1	1533500			31774	4246	15716	15780	36758	36758					0.03914357931569157
SLLDGHFVL	9	Unmodified	_SLLDGHFVL_					0	0	0		ENST00000535644.1_1_11:67163166-67165027:+|nuORF;ENST00000538013.5_1_11:67160139-67164890:+|nuORF;ENSG00000172613|ENST00000307980|RAD9A	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7781860232353	2	500.776742	999.538931	1.9369	0.00096996	1.247	0.00062447	3.1839	0.0015944	500.776967909089	70.612	0.31126	70.935	70.8	71.112	0.32339					21	9	3	0	0	0	0.21592	1	29554	29554		42.095	13.608	1	1971100			31775	4246	15716	15780	36759	36759					0.03914357931569157
SLLDGHFVL	9	Unmodified	_SLLDGHFVL_					0	0	0		ENST00000535644.1_1_11:67163166-67165027:+|nuORF;ENST00000538013.5_1_11:67160139-67164890:+|nuORF;ENSG00000172613|ENST00000307980|RAD9A	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7795593142509	2	500.776742	999.538931	2.3006	0.0011521	1.815	0.00090889	4.1156	0.002061	500.7779327946121	69.503	0.51479	70.869	70.645	71.159	1.3657					32	16	3	0	0	0	0.053939	2	29140	29140;29191		74.423	26.077	1	4816300			31776	4246	15716	15780	36760;36761	36760					0.03914357931569157
SLLDGHFVL	9	Unmodified	_SLLDGHFVL_					0	0	0		ENST00000535644.1_1_11:67163166-67165027:+|nuORF;ENST00000538013.5_1_11:67160139-67164890:+|nuORF;ENSG00000172613|ENST00000307980|RAD9A	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	ENST00000535644.1_1_11:67163166-67165027:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7794677615166	2	500.776742	999.538931	1.0359	0.00051873	1.669	0.00083577	2.7048	0.0013545	500.7780353186477	68.962	0.42151	70.815	70.588	71.009	1.853					30	13	3	0	0	0	0.053939	2	28893	28893;28945		85.357	27.885	1	3864400			31777	4246	15716	15780	36762;36763	36762					0.03914357931569157
SLLDIELLL	9	Unmodified	_SLLDIELLL_					0	0	0			REV__ENSG00000214842|ENST00000399080|RAD51AP2	REV__ENSG00000214842|ENST00000399080|RAD51AP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8171874880791	2	514.815533	1027.61651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.27	1	98.526	98.026	99.026	0.25636								0	0	0	0.026118	1	41351	41351		77.984	0	1		+		31778	11861	15717	15781	36764	36764					0.10380951077104328
SLLDIIEKV	9	Unmodified	_SLLDIIEKV_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.3141357302666	2	515.313158	1028.61176	2.479	0.0012775	-0.59733	-0.00030781	1.8817	0.00096967	515.3128492300992	83.242	0.73734	83.242	82.984	83.721	0					63	23	4	0	0	0	0.0049178	4	34712	34612;34661;34712;34753		122.18	28.145	1	31750000			31779	1421	15718	15782	36765;36766;36767;36768	36767					0.098600669343341
SLLDIIEKV	9	Unmodified	_SLLDIIEKV_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.3147460818291	2	515.313158	1028.61176	2.4052	0.0012394	0.044492	2.2928E-05	2.4497	0.0012624	515.3132245542862	82.716	0.98179	82.986	82.479	83.461	0.27029					71	31	4	0	0	0	0.00030345	3	34554	34554;34605;34659		137.42	34.004	1	42359000			31780	1421	15718	15782	36769;36770;36771	36769					0.098600669343341
SLLDIIEKV	9	Unmodified	_SLLDIIEKV_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3148071169853	2	515.313158	1028.61176	3.9266	0.0020234	-1.2112	-0.00062415	2.7154	0.0013993	515.3126510125721	81.809	1.0627	83.022	82.636	83.698	1.2125					90	33	5	0	0	0	0.00030345	5	34360	34258;34308;34360;34399;34438		137.42	23.621	1	117090000			31781	1421	15718	15782	36772;36773;36774;36775;36776	36774					0.098600669343341
SLLDIIEKV	9	Unmodified	_SLLDIIEKV_					0	0	0		nc|ENSG00000103197|P49815-7|TSC2;nc|ENSG00000103197|P49815-6|TSC2;nc|ENSG00000103197|P49815-5|TSC2;nc|ENSG00000103197|P49815-3|TSC2;nc|ENSG00000103197|P49815-2|TSC2;nc|ENSG00000103197|P49815-4|TSC2;ENSG00000103197|ENST00000219476|TSC2;TSC2|p.R799Afs*25|1|0.29|ENSG00000103197|chr16:2074238-2074253|CCGCTGTGCCAGCCAG/-|frameshift_variant	nc|ENSG00000103197|P49815-7|TSC2	nc|ENSG00000103197|P49815-7|TSC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3155395388603	2	515.313158	1028.61176	3.5961	0.0018531	-0.18634	-9.6025E-05	3.4098	0.0017571	515.3131605408071	81.333	0.92963	83.029	82.671	83.601	1.6959					89	29	6	0	0	0	3.8363E-05	5	34136	34048;34097;34136;34175;34214		157.8	24.743	1	124640000			31782	1421	15718	15782	36777;36778;36779;36780;36781	36779					0.098600669343341
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2882873415947	2	465.286943	928.559333	2.1585	0.0010043	-0.31871	-0.00014829	1.8398	0.00085602	465.28683369647035	65.178	0.98827	65.178	64.881	65.87	0					86	30	5	0	0	0	0.033102	3	27127	27127;27166;27245		82.529	2.933	1	63578000			31783	4447	15719	15783	36782;36783;36784	36782					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2880432009697	2	465.286943	928.559333	2.5956	0.0012077	-0.47016	-0.00021876	2.1254	0.00098892	465.28681104270163	64.662	1.0186	64.989	64.689	65.707	0.32689					88	31	5	0	0	0	0.015029	3	27060	27060;27099;27138		103.35	3.2526	1	86604000			31784	4447	15719	15783	36785;36786;36787	36785					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2885619997978	2	465.286943	928.559333	2.5746	0.0011979	-0.15229	-7.0857E-05	2.4223	0.0011271	465.28734429829257	63.537	1.1502	64.95	64.596	65.746	1.4134					104	36	5	0	0	0	0.015029	3	26637	26553;26637;26689		103.35	2.982	1	231860000			31785	4447	15719	15783	36788;36789;36790	36789					0.09219528591370363
SLLDKIIGA	9	Unmodified	_SLLDKIIGA_					0	0	0		ENSG00000177469|ENST00000357037|CAVIN1;nc|ENSG00000177469|Q6NZI2-2|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	ENSG00000177469|ENST00000357037|CAVIN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2887145876884	2	465.286943	928.559333	2.6075	0.0012132	-0.54231	-0.00025233	2.0652	0.00096091	465.28707194913125	62.915	1.0932	64.86	64.597	65.69	1.9444					95	34	5	0	0	0	0.026734	3	26414	26414;26453;26492		92.653	3.2526	1	196070000			31786	4447	15719	15783	36791;36792;36793	36791					0.09219528591370363
SLLDLEQKL	9	Unmodified	_SLLDLEQKL_					0	0	0		ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.8094970583916	2	529.808239	1057.60193	2.2007	0.0011659	0.82515	0.00043717	3.0258	0.0016031	529.8086117770151	60.781	0.47585	60.781	60.508	60.984	0					40	14	4	0	0	0	0.0049178	3	25335	25297;25335;25376		122.18	29.688	1	8804100			31787	644	15720	15784	36794;36795;36796	36795					0.07542878928961727
SLLDLEQKL	9	Unmodified	_SLLDLEQKL_					0	0	0		ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8099243044853	2	529.808239	1057.60193	2.3905	0.0012665	1.2085	0.00064025	3.599	0.0019068	529.8088511768514	60.151	0.40119	60.479	60.295	60.696	0.32809					38	12	4	0	0	0	2.9716E-05	4	25241	25159;25203;25241;25288		163.04	44.141	1	8616500			31788	644	15720	15784	36797;36798;36799;36800	36799					0.07542878928961727
SLLDLEQKL	9	Unmodified	_SLLDLEQKL_					0	0	0		ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8089477419853	2	529.808239	1057.60193	2.0705	0.001097	-0.93243	-0.00049401	1.1381	0.00060296	529.8077185067988	58.993	0.41924	60.412	60.198	60.617	1.4196					42	13	4	0	0	0	3.3414E-05	2	24731	24684;24731		160.52	45.867	1	32357000			31789	644	15720	15784	36801;36802	36802					0.07542878928961727
SLLDLEQKL	9	Unmodified	_SLLDLEQKL_					0	0	0		ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	ENSG00000034693|ENST00000367591|PEX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8083984255791	2	529.808239	1057.60193	1.9508	0.0010336	-0.85634	-0.0004537	1.0945	0.00057987	529.8076727122095	58.534	0.53891	60.503	60.214	60.753	1.969					47	17	4	0	0	0	0.00030345	2	24531	24482;24531		137.42	37.625	1	25529000			31790	644	15720	15784	36803;36804	36804					0.07542878928961727
SLLDNMIGV	9	Unmodified	_SLLDNMIGV_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2541076540947	2	481.254785	960.495018	2.0158	0.00097013	-1.7842	-0.00085868	0.23158	0.00011145	481.2537850649727	77.301	0.31291	77.301	77.157	77.47	0					14	9	2	0	0	0	0.10294	1	32164	32164		48.346	29.089	1	852240			31791	2378	15721	15785	36805	36805					0.013190054429401243
SLLDNMIGV	9	Unmodified	_SLLDNMIGV_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2552673220634	2	481.254785	960.495018	2.8959	0.0013937	-1.9626	-0.00094449	0.93333	0.00044917	481.25361343309436	77.009	0.28431	77.325	77.133	77.418	0.31654					19	8	3	0	0	0	0.1735	2	32170	32170;32220		36.044	13.049	1	962500			31792	2378	15721	15785	36806;36807	36806					0.013190054429401243
SLLDNMIGV	9	Unmodified	_SLLDNMIGV_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2551452517509	2	481.254785	960.495018	2.5865	0.0012448	-1.1774	-0.00056664	1.4091	0.00067813	481.25430734886214	76.047	0.39071	77.341	77.128	77.519	1.2938					33	12	3	0	0	0	0.031324	1	31894	31894		85.357	37.011	1	4156100			31793	2378	15721	15785	36808	36808					0.013190054429401243
SLLDNMIGV	9	Unmodified	_SLLDNMIGV_					0	0	0		nc|ENSG00000128641|O43795-2|MYO1B;ENSG00000128641|ENST00000392318|MYO1B;ENST00000471904.1_1_2:192128111-192215016:+|nuORF	nc|ENSG00000128641|O43795-2|MYO1B	nc|ENSG00000128641|O43795-2|MYO1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	481.254785	960.495018	2.6025	0.0012525	-1.6558	-0.00079688	0.94671	0.00045561	481.2542121769891	75.581	0.38604	77.362	77.166	77.552	1.7817	0.030042	1.3225E-08	NaN	85.357	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4507800			31794	2378	15721	15785							0.013190054429401243
SLLDNQLDEI	10	Unmodified	_SLLDNQLDEI_					0	0	0			REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	REV__nc|ENSG00000186260|Q9ULH7-4|MRTFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.2009765505791	3	387.199554	1158.57683	1.9068	0.0007383	2.5499	0.00098733	4.4567	0.0017256	387.20017774441277	40.575	0.94556	42.437	42.233	43.179	1.8624					50	29	3	0	0	0	0.63205	1	17041	17041		14.218	0	1	3557000	+		31795	11494	15722	15786	36809	36809					0.003887793357080227
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	968.5346557497978	1	968.529889	967.522613	1.8862	0.0018268	2.0836	0.002018	3.9698	0.0038448	968.5322486981939	66.755	0.37475	67.079	66.876	67.25	0.32449					18	11	2	0	0	0	0.023786	1	27942	27942		96.285	0	1	1021700			31796	1120	15723	15787	36810	36810					0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	968.5330688357353	1	968.529889	967.522613	2.1987	0.0021295	0.54972	0.00053242	2.7484	0.002662	968.5306580151051	65.564	0.45919	66.963	66.757	67.216	1.3989					29	14	3	0	0	0	0.01454	2	27476	27476;27529		103.75	7.4635	1	3848700			31797	1120	15723	15787	36811;36812	36811					0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7694579958916	2	484.768583	967.522613	2.6424	0.001281	-0.029911	-1.45E-05	2.6125	0.0012665	484.768498908984	65.651	0.45919	67.05	66.757	67.216	1.3989					24	14	2	0	0	0	0.20671	1	27558	27558		32.305	6.9062	1	1616800			31798	1120	15723	15787	36813	36813					0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	968.5321533083916	1	968.529889	967.522613	1.6856	0.0016325	0.4261	0.00041269	2.1117	0.0020452	968.5300834197383	65.138	0.43394	67.047	66.815	67.248	1.9085					31	13	3	0	0	0	0.023786	1	27369	27369		96.285	0	1	3919600			31799	1120	15723	15787	36814	36814					0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	968.529889	967.522613	1.6507	0.0015988	-1.9237	-0.0018631	-0.27293	-0.00026434	968.5279228026503	67.144	0.29794	67.144	66.99	67.288	0	0.085898	-0.0026089	NaN	103.75	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	951200			31800	1120	15723	15787							0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	484.768583	967.522613	2.6271	0.0012735	1.6839	0.00081629	4.3109	0.0020898	484.7690378449428	66.861	0.37363	67.186	66.939	67.312	0.32449	0.087036	0.0010225	NaN	32.305	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	723630			31801	1120	15723	15787							0.03755231974810158
SLLDPVPEV	9	Unmodified	_SLLDPVPEV_					0	0	0		ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	ENSG00000089154|ENST00000300648|GCN1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	484.768583	967.522613	1.7361	0.00084159	0.45095	0.00021861	2.187	0.0010602	484.76851677537513	65.152	0.49966	67.06	66.844	67.344	1.9085	-0.038493	-0.00017286	NaN	32.305	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1329800			31802	1120	15723	15787							0.03755231974810158
SLLDRFLATV	10	Unmodified	_SLLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8305541872978	2	567.829506	1133.64446	2.1928	0.0012452	-1.0363	-0.00058846	1.1565	0.00065669	567.8287528401813	85.148	0.54142	85.148	84.845	85.386	0					44	16	4	0	0	0	0.068876	3	35469	35420;35469;35510		70.929	34.422	1	5565300			31803	2047	15724	15788	36815;36816;36817	36816					0.08298274057187882
SLLDRFLATV	10	Unmodified	_SLLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.8311035037041	2	567.829506	1133.64446	2.411	0.0013691	-1.172	-0.00066548	1.2391	0.00070358	567.8286528072842	84.577	0.73563	84.838	84.469	85.204	0.26083					57	22	4	0	0	0	0.068876	3	35375	35323;35375;35424		70.929	36.527	1	5907800			31804	2047	15724	15788	36818;36819;36820	36819					0.08298274057187882
SLLDRFLATV	10	Unmodified	_SLLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8307372927666	2	567.829506	1133.64446	1.5304	0.00086898	-0.68466	-0.00038877	0.8457	0.00048021	567.8294696646611	83.745	0.59624	84.933	84.61	85.207	1.1879					45	18	4	0	0	0	0.048489	3	35150	35107;35150;35190		117.84	56.236	1	13241000			31805	2047	15724	15788	36821;36822;36823	36822					0.08298274057187882
SLLDRFLATV	10	Unmodified	_SLLDRFLATV_					0	0	0		nc|ENSG00000118816|Q14094-2|CCNI;ENSG00000118816|ENST00000237654|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	nc|ENSG00000118816|Q14094-2|CCNI	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8302490115166	2	567.829506	1133.64446	1.8944	0.0010757	-0.90096	-0.00051159	0.99343	0.0005641	567.8289733834574	83.321	0.47335	84.959	84.694	85.167	1.6379					41	14	4	0	0	0	0.048489	4	34915	34868;34915;34955;35013		85.764	38.17	1	10244000			31806	2047	15724	15788	36824;36825;36826;36827	36825					0.08298274057187882
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	902.5233032107353	1	902.519325	901.512048	1.8489	0.0016686	0.36743	0.00033161	2.2163	0.0020003	902.519474606379	80.934	0.40414	80.934	80.728	81.133	0					29	12	3	0	0	0	0.03795	3	33655	33655;33706;33761		77.984	13.608	1	3530400			31807	3807	15725	15789	36828;36829;36830	36828					0.057352493203779886
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	902.5213500857353	1	902.519325	901.512048	1.9943	0.0017999	0.44074	0.00039778	2.435	0.0021976	902.5195621831213	80.562	0.37181	80.853	80.655	81.026	0.29055					28	11	3	0	0	0	0.03795	3	33683	33639;33683;33726		77.984	6.448	1	3563400			31808	3807	15725	15789	36831;36832;36833	36832					0.057352493203779886
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5211059451103	1	902.519325	901.512048	2.4114	0.0021763	0.17172	0.00015498	2.5831	0.0023313	902.5193812126555	79.689	0.46355	80.94	80.707	81.171	1.2512					41	14	4	0	0	0	0.0082953	3	33437	33389;33437;33476		109.63	0	1	18308000			31809	3807	15725	15789	36834;36835;36836	36835					0.057352493203779886
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7641784548759	2	451.7633	901.512048	2.9183	0.0013184	-0.43702	-0.00019743	2.4813	0.001121	451.76303681381415	79.628	0.40135	80.879	80.739	81.14	1.2512					21	12	2	0	0	0	0.44535	1	33483	33483		18.135	4.6271	1	2955600			31810	3807	15725	15789	36837	36837					0.057352493203779886
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.7639648318291	2	451.7633	901.512048	1.9878	0.00089799	-0.50536	-0.00022831	1.4824	0.00066969	451.7630194407114	79.247	0.37185	80.982	80.814	81.185	1.735					16	11	2	0	0	0	0.1735	2	33296	33208;33296		36.044	11.37	1	2015800			31811	3807	15725	15789	36838;36839	36839					0.057352493203779886
SLLDSVVGL	9	Unmodified	_SLLDSVVGL_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5202514529228	1	902.519325	901.512048	1.6439	0.0014837	0.0034588	3.1216E-06	1.6474	0.0014868	902.5191831895478	79.249	0.43216	80.984	80.753	81.185	1.735					40	13	4	0	0	0	0.022807	2	33229	33229;33266		97.075	0	1	13914000			31812	3807	15725	15789	36840;36841	36840					0.057352493203779886
SLLDTYQK	8	Unmodified	_SLLDTYQK_					0	0	0		HIPK2|p.K132*|1|0.04|ENSG00000064393|chr7:139716641-139716642|-/TA|frameshift_variant;HIPK2|p.I875Nfs*8|1|0.04|ENSG00000064393|chr7:139596812-139596813|-/ATTTTTTAAGACCAACATGATTC|frameshift_variant;nc|ENSG00000064393|Q9H2X6-2|HIPK2;nc|ENSG00000064393|Q9H2X6-3|HIPK2;ENSG00000064393|ENST00000406875|HIPK2	HIPK2|p.K132*|1|0.04|ENSG00000064393|chr7:139716641-139716642|-/TA|frameshift_variant	HIPK2|p.K132*|1|0.04|ENSG00000064393|chr7:139716641-139716642|-/TA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	484.2588073611259	2	484.258382	966.502212	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.663	1	64.99	64.49	65.49	0.32689								0	0	0	1.0178	1	27084	27084		10.074	0	1				31813	771	15726	15790	36842	36842					0.017620613149915698
SLLEDLSHI	9	Unmodified	_SLLEDLSHI_					0	0	0		ENSG00000197019|ENST00000357949|SERTAD1	ENSG00000197019|ENST00000357949|SERTAD1	ENSG00000197019|ENST00000357949|SERTAD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7784911990166	2	513.776939	1025.53933	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.484	1	69.854	69.354	70.354	1.3708								0	0	0	0.042463	1	28737	28737		48.346	8.3885	1				31814	4976	15727	15791	36843	36843					0.027577328607549134
SLLEDLSHI	9	Unmodified	_SLLEDLSHI_					0	0	0		ENSG00000197019|ENST00000357949|SERTAD1	ENSG00000197019|ENST00000357949|SERTAD1	ENSG00000197019|ENST00000357949|SERTAD1	MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7787963747978	2	513.776939	1025.53933	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.926	1	69.796	69.296	70.296	1.87								0	0	0	0.042463	1	28500	28500		48.346	8.3885	1				31815	4976	15727	15791	36844	36844					0.027577328607549134
SLLEKQQIYL	10	Unmodified	_SLLEKQQIYL_					0	0	0		nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-1|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-6|ARHGEF18;nc|ENSG00000104880|Q6ZSZ5-5|ARHGEF18;ENSG00000104880|ENST00000668164|ARHGEF18	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	nc|ENSG00000104880|Q6ZSZ5-2|ARHGEF18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8589965701103	2	617.855721	1233.69689	2.1385	0.0013213	-0.42808	-0.00026449	1.7104	0.0010568	617.8557946315262	47.894	0.18478	49.87	49.743	49.928	1.976					8	5	2	0	0	0	0.45795	1	20063	20063		29.841	13.691	1	488900			31816	1486	15728	15792	36845	36845					0.08938812400151619
SLLEKSLGL	9	Unmodified	_SLLEKSLGL_					0	0	0		nc|ENSG00000124802|O43324-2|EEF1E1;ENSG00000124802|ENST00000379715|EEF1E1	nc|ENSG00000124802|O43324-2|EEF1E1	nc|ENSG00000124802|O43324-2|EEF1E1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.2937805056572	2	480.292225	958.569897	2.2151	0.0010639	0.26642	0.00012796	2.4815	0.0011918	480.29218749567997	52.146	0.43303	52.146	51.917	52.35	0					36	13	4	0	0	0	0.1388	1	21690	21690		39.95	1.9757	1	6912900			31817	2245	15729	15793	36846	36846					0.08895511245816579
SLLEKSLGL	9	Unmodified	_SLLEKSLGL_					0	0	0		nc|ENSG00000124802|O43324-2|EEF1E1;ENSG00000124802|ENST00000379715|EEF1E1	nc|ENSG00000124802|O43324-2|EEF1E1	nc|ENSG00000124802|O43324-2|EEF1E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2946349978447	2	480.292225	958.569897	1.5943	0.00076574	0.81329	0.00039062	2.4076	0.0011564	480.2926967428293	49.766	0.44025	51.743	51.506	51.946	1.9772					38	13	4	0	0	0	0.023685	1	20798	20798		96.367	0.081824	1	16721000			31818	2245	15729	15793	36847	36847					0.08895511245816579
SLLENIAKA	9	Unmodified	_SLLENIAKA_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7828857302666	2	479.782025	957.549496	2.4346	0.0011681	-0.11298	-5.4203E-05	2.3216	0.0011139	479.7817964226477	40.789	0.34387	42.115	41.929	42.273	1.3254					23	10	3	0	0	0	0.20244	2	17118	17070;17118		32.786	4.4241	1	1407200			31819	4700	15730	15794	36848;36849	36849					0.0690234058599799
SLLENIAKA	9	Unmodified	_SLLENIAKA_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7832824587822	2	479.782025	957.549496	2.0131	0.00096583	-0.64627	-0.00031007	1.3668	0.00065576	479.7817391575591	40.331	0.33913	42.194	42.051	42.39	1.8624					18	10	2	0	0	0	0.28372	2	16904	16904;16951		26.268	5.8145	1	1017100			31820	4700	15730	15794	36850;36851	36850					0.0690234058599799
SLLENLEKI	9	Unmodified	_SLLENLEKI_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000553444.1_1_14:21679384-21680083:-|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.8091918826103	2	529.808239	1057.60193	2.0079	0.0010638	-0.05944	-3.1492E-05	1.9485	0.0010323	529.8080789277996	64.223	0.67383	64.223	63.983	64.657	0					56	20	4	0	0	0	1.944E-05	4	26763	26726;26763;26802;26842		173.69	3.6126	1	20654000			31821	1161	15731	15795	36852;36853;36854;36855	36853					0.07542878928961727
SLLENLEKI	9	Unmodified	_SLLENLEKI_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000553444.1_1_14:21679384-21680083:-|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8087036013603	2	529.808239	1057.60193	2.0339	0.0010776	-0.99068	-0.00052487	1.0432	0.00055268	529.8076908124594	63.683	0.77197	64.012	63.725	64.497	0.32899					63	24	4	0	0	0	0.0011269	4	26657	26612;26657;26709;26751		133.05	0	1	28401000			31822	1161	15731	15795	36856;36857;36858;36859	36857					0.07542878928961727
SLLENLEKI	9	Unmodified	_SLLENLEKI_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000553444.1_1_14:21679384-21680083:-|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8090087771416	2	529.808239	1057.60193	2.9228	0.0015485	-0.75377	-0.00039935	2.169	0.0011492	529.8079142400097	62.5	0.6665	63.913	63.648	64.314	1.4134					68	21	5	0	0	0	2.9088E-05	4	26234	26134;26183;26234;26287		163.69	3.7241	1	123510000			31823	1161	15731	15795	36860;36861;36862;36863	36862					0.07542878928961727
SLLENLEKI	9	Unmodified	_SLLENLEKI_					0	0	0		ENSG00000092199|ENST00000553300|HNRNPC;nc|ENSG00000092199|P07910|HNRNPC;nc|ENSG00000092199|P07910-3|HNRNPC;nc|ENSG00000092199|P07910-4|HNRNPC;ENSG00000277058|ENST00000617807|HNRNPCL3;ENSG00000275774|ENST00000621994|HNRNPCL2;ENSG00000179412|ENST00000323770|HNRNPCL4;ENSG00000179172|ENST00000317869|HNRNPCL1;ENST00000553444.1_1_14:21679384-21680083:-|nuORF	ENSG00000092199|ENST00000553300|HNRNPC	ENSG00000092199|ENST00000553300|HNRNPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.8104736208916	2	529.808239	1057.60193	3.0237	0.001602	-0.54261	-0.00028748	2.4811	0.0013145	529.8079984047112	61.967	0.67306	63.924	63.594	64.267	1.9571					66	21	5	0	0	0	2.9088E-05	4	25911	25911;25959;25998;26037		163.69	3.2117	1	90511000			31824	1161	15731	15795	36864;36865;36866;36867	36864					0.07542878928961727
SLLEPFVYL	9	Unmodified	_SLLEPFVYL_					0	0	0		nc|ENSG00000168256|Q9NYR9-2|NKIRAS2;ENSG00000168256|ENST00000393885|NKIRAS2;nc|ENSG00000168256|Q9NYR9-3|NKIRAS2	nc|ENSG00000168256|Q9NYR9-2|NKIRAS2	nc|ENSG00000168256|Q9NYR9-2|NKIRAS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.8054077029228	2	540.802426	1079.5903	1.402	0.00075818	3.5551	0.0019226	4.9571	0.0026808	540.804775295881	96.403	0.12626	96.403	96.321	96.447	0					5	3	2	0	0	0	0.5697	1	40305	40305		12.532	0.89125	1	784760			31825	4023	15732	15796	36868	36868					0.053686819056110835
SLLESVQKL	9	Unmodified	_SLLESVQKL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.8027831912041	2	508.802957	1015.59136	2.2561	0.0011479	-2.0057	-0.0010205	0.25038	0.00012739	508.8030067737048	49.858	0.30008	49.858	49.691	49.991	0					15	9	2	0	0	0	0.46566	1	20835	20835		17.113	0	1	890010			31826	4351	15733	15797	36869	36869					0.08418896274520193
SLLESVQKL	9	Unmodified	_SLLESVQKL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.8058654665947	2	508.802957	1015.59136	1.9595	0.00099699	0.78275	0.00039827	2.7422	0.0013953	508.80380562709405	49.265	0.25971	49.596	49.499	49.758	0.33019					14	8	2	0	0	0	0.063746	2	20649	20649;20686		62.573	6.3957	1	995780			31827	4351	15733	15797	36870;36871	36870					0.08418896274520193
SLLESVQKL	9	Unmodified	_SLLESVQKL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	508.802957	1015.59136	2.4016	0.0012219	0.14164	7.2065E-05	2.5432	0.001294	508.8027525917306	47.939	0.24857	49.327	49.178	49.427	1.388	-0.21334	-1.6607E-05	NaN	62.573	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1948000			31828	4351	15733	15797							0.08418896274520193
SLLESVQKL	9	Unmodified	_SLLESVQKL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.802957	1015.59136	2.8235	0.0014366	0.58097	0.0002956	3.4045	0.0017322	508.8029279899218	47.405	0.27327	49.381	49.282	49.555	1.976	-0.15965	0.00043047	NaN	62.573	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2718300			31829	4351	15733	15797							0.08418896274520193
SLLGDDALVQV	11	Unmodified	_SLLGDDALVQV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;ENST00000568291.2_1_16:70588380-70590279:+|nuORF;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3092529177666	2	565.308603	1128.60265	1.2483	0.00070566	-0.96526	-0.00054567	0.28301	0.00015999	565.3076490401595	70.721	0.27837	70.721	70.596	70.875	0					13	8	2	0	0	0	0.70499	1	29457	29457		18.146	4.2403	1	555580			31830	4895;15952	15734	15798	36872	36872					0.043496735779854134
SLLGDDALVQV	11	Unmodified	_SLLGDDALVQV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;ENST00000568291.2_1_16:70588380-70590279:+|nuORF;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	565.3083373904228	2	565.308603	1128.60265	1.1696	0.00066118	-0.85416	-0.00048286	0.31544	0.00017832	565.3076196804514	70.34	0.20628	70.662	70.53	70.737	0.32224					12	6	2	0	0	0	0.2718	1	29456	29456		34.402	9.4108	1	992970			31831	4895;15952	15734	15798	36873	36873					0.043496735779854134
SLLGDDALVQV	11	Unmodified	_SLLGDDALVQV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;ENST00000568291.2_1_16:70588380-70590279:+|nuORF;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3079101443291	2	565.308603	1128.60265	2.0685	0.0011694	-0.23914	-0.00013519	1.8294	0.0010342	565.3088203633504	69.265	0.62975	70.631	70.187	70.817	1.3657					29	15	3	0	0	0	0.098753	2	29114	29061;29114		56.177	16.227	1	3794000			31832	4895;15952	15734	15798	36874;36875	36875					0.043496735779854134
SLLGFVYKL	9	Unmodified	_SLLGFVYKL_					0	0	0		nc|ENSG00000185745|P09914-2|IFIT1;ENSG00000185745|ENST00000371804|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	520.3130981326103	2	520.312961	1038.61137	2.18	0.0011343	-1.5256	-0.00079378	0.65446	0.00034052	520.3118964903499	77.33	0.439	77.646	77.418	77.857	0.31653					31	13	3	0	0	0	0.17276	1	32349	32349		36.127	7.6402	1	2505600			31833	4758	15735	15799	36876	36876					0.09360692005134297
SLLGFVYKL	9	Unmodified	_SLLGFVYKL_					0	0	0		nc|ENSG00000185745|P09914-2|IFIT1;ENSG00000185745|ENST00000371804|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3138305544853	2	520.312961	1038.61137	2.6633	0.0013858	-0.17606	-9.1608E-05	2.4873	0.0012942	520.3123329282641	76.232	0.41946	77.525	77.311	77.731	1.2938					32	13	3	0	0	0	0.098163	1	31989	31989		49.933	15.831	1	3288500			31834	4758	15735	15799	36877	36877					0.09360692005134297
SLLGFVYKL	9	Unmodified	_SLLGFVYKL_					0	0	0		nc|ENSG00000185745|P09914-2|IFIT1;ENSG00000185745|ENST00000371804|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3130370974541	2	520.312961	1038.61137	2.7534	0.0014326	-1.3713	-0.0007135	1.3821	0.00071911	520.3117556777536	75.632	0.44556	77.414	77.227	77.672	1.7817					32	14	3	0	0	0	0.098163	1	31724	31724		49.933	23.049	1	2580800			31835	4758	15735	15799	36878	36878					0.09360692005134297
SLLGFVYKL	9	Unmodified	_SLLGFVYKL_					0	0	0		nc|ENSG00000185745|P09914-2|IFIT1;ENSG00000185745|ENST00000371804|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	nc|ENSG00000185745|P09914-2|IFIT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	520.312961	1038.61137	2.0287	0.0010555	-0.76564	-0.00039837	1.263	0.00065716	520.31234222403	77.886	0.50109	77.886	77.688	78.189	0	0.26809	0.00014209	NaN	49.933	31	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2190700			31836	4758	15735	15799							0.09360692005134297
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	945.5273315310478	1	945.525138	944.517862	2.1154	0.0020001	0.28644	0.00027084	2.4018	0.002271	945.525440145343	61.376	0.37927	61.376	61.172	61.552	0					33	11	4	0	0	0	0.059378	3	25594	25546;25594;25633		99.799	33.342	1	7994500			31837	7901	15736	15800	36879;36880;36881	36880					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2675353884697	2	473.266207	944.517862	2.724	0.0012892	-0.73373	-0.00034725	1.9903	0.00094193	473.2660283526495	61.372	0.40967	61.372	61.172	61.582	0					27	12	3	0	0	0	0.047799	3	25595	25550;25595;25656		85.272	26.593	1	5368400			31838	7901	15736	15800	36882;36883;36884	36883					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	945.5273925662041	1	945.525138	944.517862	2.1679	0.0020498	0.2919	0.000276	2.4598	0.0023258	945.525312129281	60.88	0.43967	61.208	60.98	61.42	0.32809					38	13	4	0	0	0	0.043055	3	25554	25465;25513;25554		81.89	15.434	1	6721300			31839	7901	15736	15800	36885;36886;36887	36887					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2675048708916	2	473.266207	944.517862	2.8842	0.001365	-0.4997	-0.00023649	2.3845	0.0011285	473.26612769944336	60.89	0.3783	61.218	61.011	61.389	0.32809					27	11	3	0	0	0	0.062248	3	25514	25471;25514;25552		96.285	24.362	1	6549100			31840	7901	15736	15800	36888;36889;36890	36889					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	945.5273315310478	1	945.525138	944.517862	2.1488	0.0020318	0.39001	0.00036876	2.5388	0.0024005	945.5253758565781	59.832	0.52304	61.252	60.926	61.449	1.4196					53	16	4	0	0	0	0.043055	4	25077	24995;25038;25077;25117		96.285	33.813	1	27310000			31841	7901	15736	15800	36891;36892;36893;36894	36893					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2675353884697	2	473.266207	944.517862	2.6284	0.0012439	-0.11497	-5.441E-05	2.5134	0.0011895	473.26625381499474	59.772	0.64011	61.192	60.926	61.566	1.4196					53	20	5	0	0	0	0.051733	3	25051	25009;25051;25090		78.149	19.471	1	61221000			31842	7901	15736	15800	36895;36896;36897	36896					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.5283080935478	1	945.525138	944.517862	2.8762	0.0027195	-0.23884	-0.00022583	2.6374	0.0024937	945.5248180842437	59.302	0.49158	61.271	61.004	61.495	1.969					47	15	4	0	0	0	0.043055	4	24963	24825;24869;24919;24963		92.491	24.411	1	33414000			31843	7901	15736	15800	36898;36899;36900;36901	36901					0.04338347832049294
SLLGGDVVSV	10	Unmodified	_SLLGGDVVSV_					0	0	0		nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	nc|ENSG00000157514|Q99576|TSC22D3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2682372927666	2	473.266207	944.517862	2.9301	0.0013867	-1.029	-0.00048697	1.9012	0.00089975	473.2657499669987	59.36	0.54503	61.329	61.037	61.582	1.969					50	17	4	0	0	0	0.051733	2	24868	24826;24868		78.149	25.881	1	27410000			31844	7901	15736	15800	36902;36903	36903					0.04338347832049294
SLLGGTLVSA	10	Unmodified	_SLLGGTLVSA_					0	0	0		ENSG00000110628|ENST00000649076|SLC22A18;ENST00000498244.1_1_11:2930522-2930941:+|nuORF	ENSG00000110628|ENST00000649076|SLC22A18	ENSG00000110628|ENST00000649076|SLC22A18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	917.5295287966728	1	917.530224	916.522947	0.71123	0.00065257	-0.94828	-0.00087008	-0.23705	-0.0002175	917.5294647634436	57.307	0.32417	58.721	58.551	58.875	1.4145					17	11	2	0	0	0	0.043055	1	24002	24002		81.89	6.9612	1	1950900			31845	1708	15737	15801	36904	36904					0.06134651694674176
SLLGGTLVSA	10	Unmodified	_SLLGGTLVSA_					0	0	0		ENSG00000110628|ENST00000649076|SLC22A18;ENST00000498244.1_1_11:2930522-2930941:+|nuORF	ENSG00000110628|ENST00000649076|SLC22A18	ENSG00000110628|ENST00000649076|SLC22A18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	917.5312377810478	1	917.530224	916.522947	0.79329	0.00072787	-0.33042	-0.00030317	0.46288	0.0004247	917.5296902168598	56.74	0.2694	58.708	58.575	58.845	1.9684					13	8	2	0	0	0	0.063958	1	23797	23797		99.799	7.3075	1	2371900			31846	1708	15737	15801	36905	36905					0.06134651694674176
SLLGGTLVSA	10	Unmodified	_SLLGGTLVSA_					0	0	0		ENSG00000110628|ENST00000649076|SLC22A18;ENST00000498244.1_1_11:2930522-2930941:+|nuORF	ENSG00000110628|ENST00000649076|SLC22A18	ENSG00000110628|ENST00000649076|SLC22A18	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	917.530224	916.522947	1.8999	0.0017432	-2.0718	-0.0019009	-0.17188	-0.00015771	917.5284999952568	58.861	0.25302	58.861	58.752	59.005	0	0.097327	-0.00096944	NaN	81.89	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473690			31847	1708	15737	15801							0.06134651694674176
SLLGHLMIV	9	Unmodified	_SLLGHLMIV_					0	0	0		ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	492.3344604372978	2	491.791338	981.568123	1.4803	0.000728	-1.2879	-0.00063338	0.19241	9.4624E-05	491.79060555910627	72.295	0.28513	72.295	72.142	72.427	0					13	8	2	0	0	0	0.08828	1	30135	30135		28.487	3.813	1	933430			31848	4097	15738	15802	36906	36906					0.07660178956200525
SLLGHLMIV	9	Unmodified	_SLLGHLMIV_					0	0	0		ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7926818728447	2	491.791338	981.568123	2.989	0.00147	-1.3992	-0.00068813	1.5898	0.00078184	491.7903585270617	70.394	0.51337	71.748	71.552	72.066	1.3536					36	15	3	0	0	0	0.044893	2	29525	29525;29566		81.864	32.195	1	3242100			31849	4097	15738	15802	36907;36908	36907					0.07660178956200525
SLLGHLMIV	9	Unmodified	_SLLGHLMIV_					0	0	0		ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	ENSG00000169567|ENST00000304043|HINT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7922241091728	2	491.791338	981.568123	3.0035	0.0014771	-1.1896	-0.00058503	1.8139	0.00089208	491.79072105119565	69.802	0.38012	71.64	71.468	71.849	1.8378					24	11	3	0	0	0	0.04812	1	29292	29292		89.427	32.886	1	3274200			31850	4097	15738	15802	36909	36909					0.07660178956200525
SLLHHPLPV	9	Unmodified	_SLLHHPLPV_					0	0	0		ENSG00000188394|ENST00000616002|GPR21	ENSG00000188394|ENST00000616002|GPR21	ENSG00000188394|ENST00000616002|GPR21	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.4777404665947	3	338.202793	1011.58655	-2.1083	-0.00071305	2.8706	0.00097084	0.76224	0.00025779	338.2032242796126	29.092	0.33975	29.092	28.932	29.272	0					20	10	3	0	0	0	0.11819	1	12146	12146		5.2969	2.3016	1	386940			31851	4860	15739	15803	36910	36910					0.08122056922422871
SLLHLGALYGI	11	Unmodified	_SLLHLGALYGI_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.8428222537041	2	578.839874	1155.66519	1.8019	0.001043	0.22361	0.00012943	2.0255	0.0011724	578.8405085975523	75.021	0.21981	75.021	74.934	75.154	0					11	6	2	0	0	0	0.22376	1	31226	31226		38.176	17.761	1	783580			31852	1201	15740	15804	36911	36911					0.09358864436876502
SLLHLGALYGI	11	Unmodified	_SLLHLGALYGI_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.8418456912041	2	578.839874	1155.66519	2.4964	0.001445	-0.49103	-0.00028423	2.0054	0.0011608	578.8405040223814	74.483	0.34325	74.808	74.646	74.989	0.32464					20	10	3	0	0	0	0.46674	1	31144	31144		24.991	0.97039	1	629700			31853	1201	15740	15804	36912	36912					0.09358864436876502
SLLHLGALYGI	11	Unmodified	_SLLHLGALYGI_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.8418456912041	2	578.839874	1155.66519	3.3831	0.0019583	0.010027	5.804E-06	3.3932	0.0019641	578.8397813188013	73.357	0.44104	74.675	74.463	74.904	1.318					35	13	4	0	0	0	0.080685	2	30787	30743;30787		60.074	27.565	1	3356700			31854	1201	15740	15804	36913;36914	36914					0.09358864436876502
SLLHLGALYGI	11	Unmodified	_SLLHLGALYGI_					0	0	0		ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	ENSG00000099194|ENST00000370355|SCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.8410522341728	2	578.839874	1155.66519	2.6253	0.0015196	-0.69375	-0.00040157	1.9315	0.001118	578.8395035013774	72.813	0.44392	74.623	74.416	74.86	1.8101					33	13	3	0	0	0	0.080685	2	30520	30520;30569		60.074	18.844	1	3757300			31855	1201	15740	15804	36915;36916	36915					0.09358864436876502
SLLHWPSIL	9	Unmodified	_SLLHWPSIL_					0	0	0		tr|A0A553SGC2|A0A553SGC2_NIACICa(2+)/H(+)antiporterOS=NialliacirculansOX=1397GN=caxPE=3SV=1	tr|A0A553SGC2|A0A553SGC2_NIACICa(2+)/H(+)antiporterOS=NialliacirculansOX=1397GN=caxPE=3SV=1	tr|A0A553SGC2|A0A553SGC2_NIACICa(2+)/H(+)antiporterOS=NialliacirculansOX=1397GN=caxPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3099243044853	2	533.30821	1064.60187	3.4705	0.0018508	-0.27288	-0.00014553	3.1976	0.0017053	533.3079667319912	60.259	0.3471	62.225	62.008	62.356	1.9653					26	10	3	0	0	0	0.15635	2	25251	25251;25301		37.974	5.6685	1	3290800			31856	16104	15741	15805	36917;36918	36917					0.07214923719629951
SLLIWMVF	8	Unmodified	_SLLIWMVF_					0	0	0		tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	tr|A0A7D6VRF7|A0A7D6VRF7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00700PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.7498657107353	2	504.782982	1007.55141	3.2624	0.0016468	0.2498	0.0001261	3.5122	0.0017729	504.78287104889563	65.093	0.31587	66.492	66.316	66.632	1.3989					16	9	2	0	0	0	2.3239	1	27228	27228		15.768	0	1	1046200			31857	16830	15742	15806	36919	36919					0.047936780702571014
SLLKENVSEL	10	Unmodified	_SLLKENVSEL_					0	0	0		ENST00000529978.1_1_8:12870155-12879550:+|nuORF;ENSG00000250305|ENST00000524591|TRMT9B	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	ENST00000529978.1_1_8:12870155-12879550:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3165161013603	2	566.316428	1130.6183	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.36	1	97.666	97.166	98.166	0.3062								0	0	0	0.6513	1	40955	40955		13.042	0	1				31858	5380	15743	15807	36920	36920					0.05821960095045142
SLLKLLRYLWD	11	Unmodified	_SLLKLLRYLWD_					0	0	0		nc|ENSG00000197077|Q9BY89-2|KIAA1671	nc|ENSG00000197077|Q9BY89-2|KIAA1671	nc|ENSG00000197077|Q9BY89-2|KIAA1671	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	711.2610961794853	2	710.421562	1418.82857	2.189	0.0015551	-3.66	-0.0026001	-1.471	-0.001045	710.417502481582	60.304	0.70463	60.632	60.213	60.918	0.32809					54	22	3	0	0	0	0.14606	1	25160	25160		1.3295	0	1	1912900			31859	7960	15744	15808	36921	36921					0.13591042487882987
SLLKSAASVS	10	Unmodified	_SLLKSAASVS_					0	0	0			REV__PSMB8|p.G255Vfs*3|1|0.1|ENSG00000204264|chr6:32841026-32841026|C/-|frameshift_variant	REV__PSMB8|p.G255Vfs*3|1|0.1|ENSG00000204264|chr6:32841026-32841026|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.7810851931572	2	481.779482	961.544411	2.9255	0.0014094	0.12118	5.8381E-05	3.0466	0.0014678	481.7794583770498	60.895	0.3783	61.223	61.011	61.389	0.32809					24	11	3	0	0	0	0.77604	1	25516	25516		14.838	0.25658	1	4332300	+		31860	11775	15745	15809	36922	36922					0.06210036723382473
SLLLILQRPT	10	Unmodified	_SLLLILQRPT_					0	0	0		nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	nc|ENSG00000131233|P57773-2|GJA9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1552307009697	3	385.248291	1152.72304	3.9043	0.0015041	-2.0886	-0.00080463	1.8156	0.00069948	385.2473723793439	87.504	0.4644	88.596	88.366	88.831	1.0918					48	14	4	0	0	0	0.12559	1	36831	36831		0.15932	0	1	7003300			31861	7869	15746	15810	36923	36923					0.15279126362247553
SLLLKLIAV	9	Unmodified	_SLLLKLIAV_					0	0	0		nc|ENSG00000154889|Q53F39-5|MPPE1;ENST00000592447.5_1_18:11886825-11897263:-|nuORF;ENST00000589731.5_1_18:11886458-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-4|MPPE1;nc|ENSG00000154889|Q53F39-2|MPPE1;nc|ENSG00000154889|Q53F39-3|MPPE1;ENSG00000154889|ENST00000588072|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.3408080935478	2	485.338978	968.663404	1.8057	0.00087638	1.0718	0.00052018	2.8775	0.0013966	485.3394475005038	78.61	0.31429	78.61	78.441	78.756	0					19	9	3	0	0	0	0.10473	1	32708	32708		47.749	7.799	1	857590			31862	3401	15747	15811	36924	36924					0.1778185541890025
SLLLKLIAV	9	Unmodified	_SLLLKLIAV_					0	0	0		nc|ENSG00000154889|Q53F39-5|MPPE1;ENST00000592447.5_1_18:11886825-11897263:-|nuORF;ENST00000589731.5_1_18:11886458-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-4|MPPE1;nc|ENSG00000154889|Q53F39-2|MPPE1;nc|ENSG00000154889|Q53F39-3|MPPE1;ENSG00000154889|ENST00000588072|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.3405029177666	2	485.338978	968.663404	2.6695	0.0012956	0.1337	6.4889E-05	2.8032	0.0013605	485.3390481034575	76.817	0.53471	78.111	77.92	78.455	1.2938					37	16	3	0	0	0	0.033102	2	32234	32234;32283		82.529	26.352	1	3897700			31863	3401	15747	15811	36925;36926	36925					0.1778185541890025
SLLLKLIAV	9	Unmodified	_SLLLKLIAV_					0	0	0		nc|ENSG00000154889|Q53F39-5|MPPE1;ENST00000592447.5_1_18:11886825-11897263:-|nuORF;ENST00000589731.5_1_18:11886458-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-4|MPPE1;nc|ENSG00000154889|Q53F39-2|MPPE1;nc|ENSG00000154889|Q53F39-3|MPPE1;ENSG00000154889|ENST00000588072|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3399536013603	2	485.338978	968.663404	2.694	0.0013075	0.18996	9.2196E-05	2.8839	0.0013997	485.33908890815127	76.25	0.44368	78.017	77.845	78.288	1.7672					31	13	3	0	0	0	0.033102	2	31974	31974;32023		82.529	26.352	1	3743000			31864	3401	15747	15811	36927;36928	36927					0.1778185541890025
SLLLKLIAV	9	Unmodified	_SLLLKLIAV_					0	0	0		nc|ENSG00000154889|Q53F39-5|MPPE1;ENST00000592447.5_1_18:11886825-11897263:-|nuORF;ENST00000589731.5_1_18:11886458-11897263:-|nuORF;nc|ENSG00000154889|Q53F39-4|MPPE1;nc|ENSG00000154889|Q53F39-2|MPPE1;nc|ENSG00000154889|Q53F39-3|MPPE1;ENSG00000154889|ENST00000588072|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	nc|ENSG00000154889|Q53F39-5|MPPE1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	485.338978	968.663404	2.6183	0.0012708	-0.55501	-0.00026937	2.0633	0.0010014	485.3386410592602	77.966	0.32104	78.275	78.099	78.42	0.30933	0.021841	-0.00068006	NaN	82.529	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	993730			31865	3401	15747	15811							0.1778185541890025
SLLLKVCSV	9	Unmodified	_SLLLKVCSV_					0	0	0			REV__ENSG00000105887|ENST00000393085|MTPN	REV__ENSG00000105887|ENST00000393085|MTPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2902709841728	2	481.291171	960.567789	2.1274	0.0010239	-2.3133	-0.0011134	-0.1859	-8.9473E-05	481.2898906236697	66.044	0.88332	67.443	67.184	68.068	1.3989					48	28	2	0	0	0	0.5697	1	27818	27818		12.532	6.7711	1	2031400	+		31866	9195	15748	15812	36929	36929					0.08592759236341863
SLLLKVCSV	9	Unmodified	_SLLLKVCSV_					0	0	0			REV__ENSG00000105887|ENST00000393085|MTPN	REV__ENSG00000105887|ENST00000393085|MTPN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2904846072197	2	481.291171	960.567789	1.6303	0.00078463	-2.9593	-0.0014243	-1.329	-0.00063965	481.2897907531161	65.604	0.82746	67.512	67.28	68.107	1.9085					45	26	2	0	0	0	0.5697	3	27581	27581;27632;27724		12.532	4.6214	1	1695700	+		31867	9195	15748	15812	36930;36931;36932	36930					0.08592759236341863
SLLLQSPFYF	10	Unmodified	_SLLLQSPFYF_					0	0	0			REV__tr|A0A7D6ZHI9|A0A7D6ZHI9_9CLOTLysoplasmalogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23375PE=3SV=1	REV__tr|A0A7D6ZHI9|A0A7D6ZHI9_9CLOTLysoplasmalogenaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23375PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	607.8249999880791	2	607.826432	1213.63831	1.9003	0.0011551	-2.0306	-0.0012343	-0.13027	-7.9182E-05	607.8244502969532	69.892	0.44307	69.892	69.675	70.118	0					36	13	3	0	0	0	0.8325	1	29067	29067		8.7454	0.15213	1	2358500	+		31868	15652	15749	15813	36933	36933					0.04003755825669941
SLLLSCLPSL	10	Unmodified	_SLLLSCLPSL_					0	0	0		ENST00000471344.1_1_17:48271316-48272105:-|nuORF	ENST00000471344.1_1_17:48271316-48272105:-|nuORF	ENST00000471344.1_1_17:48271316-48272105:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7996703982353	2	523.301736	1044.58892	2.2157	0.0011595	-2.5952	-0.0013581	-0.37951	-0.0001986	523.3003358657364	61.245	0.62923	63.208	63.002	63.631	1.9631					40	19	3	0	0	0	0.77604	1	25800	25800		14.838	0	1	4313200			31869	6740	15750	15814	36934	36934					0.06840724545213561
SLLLVLNKEQA	11	Unmodified	_SLLLVLNKEQA_					0	0	0		tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	614.2759277224541	2	614.368995	1226.72344	1.2428	0.00076355	0.59244	0.00036398	1.8353	0.0011275	614.3694053212108	69.544	0.40899	69.866	69.657	70.066	0.32224					44	12	4	0	0	0	0.14606	1	29164	29164		13.042	0	1	12999000			31870	16411	15751	15815	36935	36935					0.11914501291471424
SLLLVLNKEQA	11	Unmodified	_SLLLVLNKEQA_					0	0	0		tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	tr|A0A553SN87|A0A553SN87_NIACIDoxXfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24010PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	614.2748901247978	2	614.368995	1226.72344	2.0449	0.0012563	-0.25455	-0.00015639	1.7903	0.0010999	614.3689217839554	68.493	0.45816	69.86	69.634	70.092	1.3668					47	14	4	0	0	0	0.14606	1	28830	28830		8.7454	1.4562	1	26328000			31871	16411	15751	15815	36936	36936					0.11914501291471424
SLLMHLLR	8	Unmodified	_SLLMHLLR_					0	0	0			REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1995727419853	3	328.200395	981.579357	-2.3092	-0.00075789	-0.13231	-4.3423E-05	-2.4416	-0.00080132	328.2003095172002	33.025	0.57637	33.025	32.688	33.265	0					81	19	5	0	0	0	0.89051	1	13909	13909		1.4819	1.4819	1	78288000	+		31872	10122	15752	15816	36937	36937					0.08783001050346684
SLLMHLLR	8	Unmodified	_SLLMHLLR_					0	0	0			REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1998474001884	3	328.200395	981.579357	-2.2769	-0.00074729	1.3761	0.00045163	-0.90086	-0.00029566	328.2009171283455	33.87	1.2629	33.87	33.638	34.901	0					105	40	5	0	0	0	0.88055	2	14272	14144;14272		6.2058	0	1	82373000	+		31873	10122	15752	15816	36938;36939	36939					0.08783001050346684
SLLMHLLR	8	Unmodified	_SLLMHLLR_					0	0	0			REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1998779177666	3	328.200395	981.579357	0.68792	0.00022577	-2.2959	-0.00075353	-1.608	-0.00052775	328.19957558819067	33.324	1.3482	33.621	33.307	34.656	0.29701					126	44	5	0	0	0	0.88055	2	14046	13921;14046		6.2058	0.8613	1	81250000	+		31874	10122	15752	15816	36940;36941	36941					0.08783001050346684
SLLMHLLR	8	Unmodified	_SLLMHLLR_					0	0	0			REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	REV__ENST00000563604.1_1_15:43017617-43017824:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1998779177666	3	328.200395	981.579357	-0.55024	-0.00018059	-0.88535	-0.00029057	-1.4356	-0.00047116	328.20012498687714	31.236	0.71529	32.517	32.057	32.773	1.2813					81	22	5	0	0	0	0.88663	2	13144	13144;13182		6.2058	2.9245	1	77331000	+		31875	10122	15752	15816	36942;36943	36942					0.08783001050346684
SLLMSIHNI	9	Unmodified	_SLLMSIHNI_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A	nc|ENSG00000180764|A2A3N6|PIPSL	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2855712771416	2	514.283877	1026.5532	2.0028	0.00103	-2.1337	-0.0010973	-0.13095	-6.7346E-05	514.2832771601368	54.296	0.34762	55.7	55.551	55.899	1.4048					22	10	3	0	0	0	0.1388	1	22717	22717		39.95	3.9055	1	1831800			31876	6817	15753	15817	36944	36944					0.040986870881852155
SLLMSIHNI	9	Unmodified	_SLLMSIHNI_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A	nc|ENSG00000180764|A2A3N6|PIPSL	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2870361208916	2	514.283877	1026.5532	1.4587	0.00075019	-0.47097	-0.00024221	0.98773	0.00050797	514.283998393254	53.766	0.2828	55.736	55.595	55.878	1.9697					16	8	2	0	0	0	0.1388	1	22520	22520		39.95	0	1	1789900			31877	6817	15753	15817	36945	36945					0.040986870881852155
SLLMVYEE	8	Unmodified	_SLLMVYEE_					0	0	0			REV__tr|A0A7D7A1H2|A0A7D7A1H2_9CLOTFe-SclusterassemblyproteinSufDOS=ClostridiumintestinaleOX=36845GN=sufDPE=4SV=1	REV__tr|A0A7D7A1H2|A0A7D7A1H2_9CLOTFe-SclusterassemblyproteinSufDOS=ClostridiumintestinaleOX=36845GN=sufDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.4961730837822	3	328.496655	982.468134	1.2232	0.00040183	-3.1501	-0.0010348	-1.9269	-0.00063298	328.4954757934984	59.772	0.36969	61.192	61.02	61.39	1.4196					18	11	2	0	0	0	0.84871	1	25069	25069		13.042	0	1	2747300	+		31878	15823	15754	15818	36946	36946					-0.023801031682637586
SLLNDPREL	9	Unmodified	_SLLNDPREL_					0	0	0			REV__tr|A0A553SFM6|A0A553SFM6_NIACIChaperoneproteinClpBOS=NialliacirculansOX=1397GN=clpBPE=3SV=1	REV__tr|A0A553SFM6|A0A553SFM6_NIACIChaperoneproteinClpBOS=NialliacirculansOX=1397GN=clpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7906371951103	2	528.787838	1055.56112	2.3645	0.0012503	3.4479	0.0018232	5.8124	0.0030735	528.7896466437037	76.707	0.34943	78.474	78.321	78.671	1.7672					26	10	4	0	0	0	0.39927	1	32171	32171		20.454	2.3073	1	2262000	+		31879	14711	15755	15819	36947	36947					0.035565376093245504
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.2822448611259	2	511.281857	1020.54916	2.5704	0.0013142	0.49821	0.00025472	3.0686	0.0015689	511.2822503755698	83.97	0.3344	83.97	83.752	84.086	0					17	10	2	0	0	0	0.22154	1	34965	34965		30.637	10.183	1	1969500			31880	1670	15756	15820	36948	36948					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1021.55479735136	1	1021.55644	1020.54916	2.3562	0.002407	-3.0358	-0.0031012	-0.6796	-0.00069425	1021.5544090443884	83.951	0.24142	83.951	83.816	84.058	0					14	7	2	0	0	0	0.11643	1	34966	34966		43.858	0	1	1193600			31881	1670	15756	15820	36949	36949					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.2839538455009	2	511.281857	1020.54916	2.5126	0.0012847	0.4195	0.00021448	2.9321	0.0014991	511.2820578133887	83.508	0.34063	83.778	83.553	83.894	0.27029					22	10	3	0	0	0	0.25667	2	34931	34882;34931		27.629	9.4825	1	1730000			31882	1670	15756	15820	36950;36951	36951					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1021.559008777142	1	1021.55644	1020.54916	2.7149	0.0027734	-0.37406	-0.00038212	2.3409	0.0023913	1021.5562568645581	83.49	0.24699	83.761	83.585	83.832	0.27029					13	7	2	0	0	0	0.091139	2	34885	34885;34937		52.268	14.294	1	780060			31883	1670	15756	15820	36952;36953	36952					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.554736316204	1	1021.55644	1020.54916	2.7918	0.0028519	0.23755	0.00024267	3.0293	0.0030946	1021.5571876703262	82.553	0.31793	83.766	83.602	83.92	1.2125					18	9	3	0	0	0	0.029061	2	34628	34628;34678		88.954	20.873	1	2310400			31884	1670	15756	15820	36954;36955	36954					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2841979861259	2	511.281857	1020.54916	3.7747	0.0019299	0.18605	9.5126E-05	3.9608	0.0020251	511.28200567217544	82.534	0.47796	83.747	83.505	83.983	1.2125					34	14	3	0	0	0	0.029061	1	34659	34659		88.954	14.025	1	6079800			31885	1670	15756	15820	36956	36956					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2847473025322	2	511.281857	1020.54916	3.9595	0.0020244	0.54022	0.0002762	4.4997	0.0023006	511.28220518128626	82.058	0.37936	83.728	83.513	83.892	1.67					26	11	3	0	0	0	0.033504	2	34450	34404;34450		81.89	21.377	1	3230800			31886	1670	15756	15820	36957;36958	36958					0.03970920866140659
SLLNFVETV	9	Unmodified	_SLLNFVETV_					0	0	0		ENST00000514302.5_1_4:8609022-8621341:+|nuORF;nc|ENSG00000109625|Q66K79-3|CPZ;nc|ENSG00000109625|Q66K79-2|CPZ;ENSG00000109625|ENST00000360986|CPZ	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	ENST00000514302.5_1_4:8609022-8621341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1021.55968016386	1	1021.55644	1020.54916	3.667	0.0037461	0.95482	0.0009754	4.6218	0.0047215	1021.5568096190508	82.109	0.31721	83.779	83.575	83.892	1.67					20	9	3	0	0	0	0.015029	2	34425	34425;34466		103.35	31.431	1	2170600			31887	1670	15756	15820	36959;36960	36959					0.03970920866140659
SLLNIKKKKKK	11	Unmodified	_SLLNIKKKKKK_					0	0	0		AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|7|2|sense	AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|7|2|sense	AluJr_dup56749|chr12:95571156-95571496:+|1.7331361319988725|0.010101620471752|7.42|429.0|7|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	664.4641601443291	2	664.461022	1326.90749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.13	1	112.28	111.78	112.78	0.14912								0	0	0	0.63775	1	48586	48586		1.3295	0	1				31888	36	15757	15821	36961	36961					0.25711314512818717
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	401.5722839236259	3	401.571211	1201.6918	0.26995	0.0001084	2.1195	0.00085115	2.3895	0.00095955	401.5721611697105	41.995	0.46816	41.995	41.789	42.257	0					44	14	5	0	0	0	0.093783	2	17566	17566;17603		47.053	19.924	1	25338000	+		31889	8253	15758	15822	36962;36963	36962					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.8551513552666	2	601.853178	1201.6918	2.105	0.0012669	0.13552	8.1562E-05	2.2405	0.0013485	601.8532205624475	41.995	0.40635	41.995	41.821	42.227	0					37	12	4	0	0	0	0.022207	2	17591	17591;17630		97.741	7.6061	1	8963300	+		31890	8253	15758	15822	36964;36965	36964					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	401.5719787478447	3	401.571211	1201.6918	1.8563	0.00074545	-0.24144	-9.6956E-05	1.6149	0.0006485	401.5712615509146	41.59	0.54204	41.907	41.65	42.192	0.31683					51	17	4	0	0	0	0.11371	2	17444	17444;17490		38.161	12.04	1	18576000	+		31891	8253	15758	15822	36966;36967	36966					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	601.8546630740166	2	601.853178	1201.6918	1.6434	0.00098911	0.67878	0.00040852	2.3222	0.0013976	601.8535749783845	41.58	0.40239	41.897	41.696	42.099	0.31683					39	12	4	0	0	0	0.026368	1	17456	17456		92.201	16.63	1	7376700	+		31892	8253	15758	15822	36968	36968					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8531371951103	2	601.853178	1201.6918	2.3401	0.0014084	-0.67664	-0.00040724	1.6635	0.0010012	601.8527988203895	39.909	0.3983	41.219	40.991	41.389	1.3102					36	12	4	0	0	0	0.030532	2	16694	16694;16742		79.427	10.089	1	18630000	+		31893	8253	15758	15822	36969;36970	36969					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	401.5716735720634	3	401.571211	1201.6918	1.9022	0.00076388	-0.38379	-0.00015412	1.5184	0.00060976	401.5711228759991	39.882	0.39779	41.192	41.023	41.421	1.3102					43	12	5	0	0	0	0.055648	2	16706	16706;16755		53.798	19.977	1	68019000	+		31894	8253	15758	15822	36971;36972	36971					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.8540527224541	2	601.853178	1201.6918	1.658	0.00099788	0.04558	2.7432E-05	1.7036	0.0010253	601.8531838944176	39.414	0.39997	41.25	41.066	41.466	1.8366					40	12	4	0	0	0	0.026998	2	16504	16504;16548		88.364	16.656	1	8652600	+		31895	8253	15758	15822	36973;36974	36973					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	401.5714294314384	3	401.571211	1201.6918	1.4811	0.00059476	-0.038843	-1.5598E-05	1.4422	0.00057916	401.57129281663185	39.403	0.4589	41.239	41.037	41.496	1.8366					53	14	5	0	0	0	0.048196	2	16558	16509;16558		49.159	18.872	1	27399000	+		31896	8253	15758	15822	36975;36976	36976					0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	401.571211	1201.6918	0.26995	0.0001084	2.1195	0.00085115	2.3895	0.00095955	401.5721611697105	41.995	0.46816	41.995	41.789	42.257	0	0.043892	0.0016495	NaN	47.053	44	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25338000	+		31897	8253	15758	15822							0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	601.853178	1201.6918	1.6434	0.00098911	0.67878	0.00040852	2.3222	0.0013976	601.8535749783845	41.58	0.40239	41.897	41.696	42.099	0.31683	-0.048842	0.0002029	NaN	97.741	39	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7376700	+		31898	8253	15758	15822							0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	601.853178	1201.6918	2.3401	0.0014084	-0.67664	-0.00040724	1.6635	0.0010012	601.8527988203895	39.909	0.3983	41.219	40.991	41.389	1.3102	-0.015705	-0.00034561	NaN	88.364	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18630000	+		31899	8253	15758	15822							0.09902508537516042
SLLNSSLDLKI	11	Unmodified	_SLLNSSLDLKI_					0	0	0			REV__nc|ENSG00000139292|O75473-3|LGR5	REV__nc|ENSG00000139292|O75473-3|LGR5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	601.853178	1201.6918	1.658	0.00099788	0.04558	2.7432E-05	1.7036	0.0010253	601.8531838944176	39.414	0.39997	41.25	41.066	41.466	1.8366	0.015705	0.00052373	NaN	88.364	40	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8652600	+		31900	8253	15758	15822							0.09902508537516042
SLLNVIQGTT	10	Unmodified	_SLLNVIQGTT_					0	0	0			REV__nc|ENSG00000125257|O15439-2|ABCC4	REV__nc|ENSG00000125257|O15439-2|ABCC4	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.1983825564384	3	349.201118	1044.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.7	1	103.7	103.2	104.2	0								0	0	0	0.66052	1	43595	43595		3.5871	0.85186	1		+		31901	9662	15759	15823	36977	36977					0.06101708269147821
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	954.5900146365166	1	954.58701	953.579734	2.1514	0.0020537	0.057852	5.5225E-05	2.2093	0.002109	954.5871923022881	90.858	0.41013	90.858	90.621	91.031	0					35	12	3	0	0	0	0.00032761	3	37964	37917;37964;38016		136.33	39.462	1	6187300			31902	1526	15760	15824	36978;36979;36980	36979					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	954.5887328982353	1	954.58701	953.579734	2.6599	0.0025391	-1.302	-0.0012428	1.358	0.0012963	954.5860361289541	90.331	0.43269	90.541	90.34	90.772	0.20904					25	13	2	0	0	0	0.0044745	3	37855	37808;37855;37908		123.45	41.838	1	7755900			31903	1526	15760	15824	36981;36982;36983	36982					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	477.7981140017509	2	477.797143	953.579734	3.4277	0.0016377	-1.4933	-0.00071347	1.9344	0.00092425	477.7963939076181	90.355	0.56238	90.564	90.21	90.772	0.20903					38	17	3	0	0	0	0.083604	1	37841	37841		54.774	20.671	1	5222900			31904	1526	15760	15824	36984	36984					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.5906860232353	1	954.58701	953.579734	4.419	0.0042184	-0.54987	-0.0005249	3.8692	0.0036935	954.5875038652886	89.519	0.46837	90.539	90.3	90.769	1.0199					35	14	3	0	0	0	0.002761	3	37713	37664;37713;37751		128.37	39.462	1	19938000			31905	1526	15760	15824	36985;36986;36987	36986					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7989990115166	2	477.797143	953.579734	5.3133	0.0025387	-0.83962	-0.00040117	4.4737	0.0021375	477.79672688474767	89.584	0.50104	90.604	90.268	90.769	1.0199					38	15	3	0	0	0	0.029093	2	37714	37714;37754		88.904	17.77	1	11966000			31906	1526	15760	15824	36988;36989	36988					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.5906860232353	1	954.58701	953.579734	4.9004	0.0046779	-0.26403	-0.00025204	4.6364	0.0044259	954.5868397975242	89.039	0.4434	90.482	90.271	90.715	1.4428					32	13	3	0	0	0	5.2553E-05	3	37555	37469;37516;37555		149.99	49.623	1	13534000			31907	1526	15760	15824	36990;36991;36992	36992					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.7994567751884	2	477.797143	953.579734	4.7318	0.0022608	-0.44449	-0.00021237	4.2873	0.0020484	477.7969734147451	89.132	0.50554	90.537	90.201	90.707	1.4045					39	15	3	0	0	0	0.049839	2	37567	37530;37567		68.081	15.812	1	10419000			31908	1526	15760	15824	36993;36994	36994					0.10108699251179587
SLLPAIVEL	9	Unmodified	_SLLPAIVEL_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	477.797143	953.579734	2.5572	0.0012218	-0.40422	-0.00019314	2.153	0.0010287	477.7969325803271	90.828	0.69154	90.828	90.558	91.25	0	0.19463	0.00044442	NaN	88.904	39	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6594000			31909	1526	15760	15824							0.10108699251179587
SLLPFLKAV	9	Unmodified	_SLLPFLKAV_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3183471560478	2	494.315503	986.616454	1.5115	0.00074716	0.7693	0.00038028	2.2808	0.0011274	494.3162114607957	76.157	0.30409	76.157	75.98	76.284	0					20	9	3	0	0	0	0.22154	2	31684	31684;31735		30.637	11.38	1	958950			31910	1926	15761	15825	36995;36996	36995					0.12260995867745805
SLLPFLKAV	9	Unmodified	_SLLPFLKAV_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3191711306572	2	494.315503	986.616454	3.0884	0.0015266	0.94311	0.00046619	4.0315	0.0019928	494.3170321682067	75.538	0.34045	75.859	75.678	76.019	0.32163					20	10	2	0	0	0	0.15635	2	31584	31584;31636		37.974	12.575	1	971690			31911	1926	15761	15825	36997;36998	36997					0.12260995867745805
SLLPFLKAV	9	Unmodified	_SLLPFLKAV_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3190185427666	2	494.315503	986.616454	3.342	0.001652	3.0057	0.0014858	6.3477	0.0031378	494.318046880871	74.379	0.44779	75.697	75.469	75.917	1.318					37	14	3	0	0	0	0.15635	1	31248	31248		37.974	5.857	1	3607000			31912	1926	15761	15825	36999	36999					0.12260995867745805
SLLPGIRDL	9	Unmodified	_SLLPGIRDL_					0	0	0		ENSG00000141279|ENST00000322157|NPEPPS;ENST00000531486.1_1_17:45681241-45696545:+|nuORF;ENST00000530514.5_1_17:45668242-45699283:+|nuORF;nc|ENSG00000141279|P55786-2|NPEPPS	ENSG00000141279|ENST00000322157|NPEPPS	ENSG00000141279|ENST00000322157|NPEPPS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2978088259697	2	492.297842	982.581131	2.3246	0.0011444	-0.5309	-0.00026136	1.7937	0.00088305	492.2972746787434	44.38	0.4437	46.34	46.069	46.513	1.9596					29	13	3	0	0	0	0.25667	1	18562	18562		27.629	1.3607	1	1859300			31913	2951	15762	15826	37000	37000					0.08914333339930636
SLLPPDALVGL	11	Unmodified	_SLLPPDALVGL_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.8259155154228	2	547.826432	1093.63831	2.2887	0.0012538	-0.55103	-0.00030187	1.7376	0.00095193	547.8258788334549	87.337	1.3002	87.337	87.004	88.304	0					84	46	3	0	0	0	0.038204	5	36478	36478;36536;36590;36644;36748		71.922	35.795	1	4984200			31914	1336	15763	15827	37001;37002;37003;37004;37005	37001					0.0952375582564855
SLLPPDALVGL	11	Unmodified	_SLLPPDALVGL_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.8275634646416	2	547.826432	1093.63831	2.5767	0.0014116	-0.47435	-0.00025986	2.1023	0.0011517	547.8258657828413	87.069	0.86279	87.313	87.124	87.987	0.24387					59	30	3	0	0	0	0.37492	2	36600	36600;36651		27.629	15.388	1	4534900			31915	1336	15763	15827	37006;37007	37006					0.0952375582564855
SLLPPDALVGL	11	Unmodified	_SLLPPDALVGL_					0	0	0		ENSG00000101310|ENST00000650089|SEC23B;SEC23B|p.N596Lfs*20|1|0.21|ENSG00000101310|chr20:18548647-18548648|-/TT|frameshift_variant	ENSG00000101310|ENST00000650089|SEC23B	ENSG00000101310|ENST00000650089|SEC23B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	547.826432	1093.63831	3.2277	0.0017682	0.46307	0.00025368	3.6908	0.0020219	547.8262354357424	86.453	0.23222	87.58	87.487	87.719	1.1265	0.16997	0.0010012	NaN	71.922	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1586200			31916	1336	15763	15827							0.0952375582564855
SLLPPTALVGL	11	Unmodified	_SLLPPTALVGL_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;ENST00000555682.1_1_14:39560581-39561747:-|nuORF	ENSG00000100934|ENST00000307712|SEC23A	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.8404418826103	2	540.8368	1079.65905	5.5119	0.002981	0.87066	0.00047088	6.3826	0.0034519	540.8370456348806	88.194	1.0579	89.251	88.795	89.853	1.0562					46	32	2	0	0	0	0.37492	1	37099	37099		27.629	9.4938	1	636490			31917	1311	15764	15828	37008	37008					0.1224034620531711
SLLPPTALVGL	11	Unmodified	_SLLPPTALVGL_					0	0	0		ENSG00000100934|ENST00000307712|SEC23A;ENST00000555682.1_1_14:39560581-39561747:-|nuORF	ENSG00000100934|ENST00000307712|SEC23A	ENSG00000100934|ENST00000307712|SEC23A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.8417236208916	2	540.8368	1079.65905	4.7437	0.0025655	1.5514	0.00083904	6.295	0.0034046	540.8379230847768	87.875	1.0487	89.322	88.776	89.825	1.4467					49	32	2	0	0	0	0.37492	1	37106	37106		27.629	13.723	1	831700			31918	1311	15764	15828	37009	37009					0.1224034620531711
SLLPRKEEA	9	Unmodified	_SLLPRKEEA_					0	0	0		tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2019836306572	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.4	1	34.4	33.9	34.9	0								0	0	0	0.42693	1	14420	14420		0.96228	0	1				31919	16075	15765	15829	37010	37010					0.06273127989015848
SLLPRKEEA	9	Unmodified	_SLLPRKEEA_					0	0	0		tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	tr|A0A553SFR1|A0A553SFR1_NIACIS1motifdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2015563845634	3	348.201229	1041.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.345	1	92.711	92.211	93.211	1.366								0	0	0	0.42693	1	38465	38465		0.96228	0	1				31920	16075	15765	15829	37011	37011					0.06273127989015848
SLLPTSPRL	9	Unmodified	_SLLPTSPRL_					0	0	0		nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8	nc|ENSG00000112983|Q9H0E9-3|BRD8	nc|ENSG00000112983|Q9H0E9-3|BRD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.2991515994072	2	492.297842	982.581131	2.3246	0.0011444	-0.5309	-0.00026136	1.7937	0.00088305	492.2972746787434	44.38	0.4437	46.34	46.069	46.513	1.9596					29	13	3	0	0	0	0.15456	2	18606	18606;18646		38.176	7.539	1	1859300			31921	7855	15766	15830	37012;37013	37012					0.08914333339930636
SLLPTSPRL	9	Unmodified	_SLLPTSPRL_					0	0	0		nc|ENSG00000112983|Q9H0E9-3|BRD8;nc|ENSG00000112983|Q9H0E9-4|BRD8;nc|ENSG00000112983|Q9H0E9-2|BRD8	nc|ENSG00000112983|Q9H0E9-3|BRD8	nc|ENSG00000112983|Q9H0E9-3|BRD8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	492.297842	982.581131	2.64	0.0012997	-0.25705	-0.00012654	2.3829	0.0011731	492.2972737870248	44.959	0.40941	46.324	46.088	46.497	1.3653	-0.0078169	0.00011902	NaN	38.176	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2639100			31922	7855	15766	15830							0.08914333339930636
SLLQASLL	8	Unmodified	_SLLQASLL_					0	0	0			REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	REV__DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	844.5193969607353	1	844.513845	843.506569	2.5433	0.0021478	0.12829	0.00010834	2.6716	0.0022562	844.5139661812592	79.315	0.34549	80.582	80.409	80.754	1.2668					18	10	2	0	0	0	0.30755	1	33278	33278		71.134	0	1	1441400	+		31923	8462	15767	15831	37014	37014					0.07855570528568023
SLLQHLIGL	9	Unmodified	_SLLQHLIGL_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.3089172244072	2	497.30821	992.601866	1.5805	0.00078602	-0.077026	-3.8306E-05	1.5035	0.00074771	497.3082905798191	76.419	0.58605	76.419	76.164	76.75	0					42	18	3	0	0	0	0.026734	4	31830	31780;31830;31873;31943		92.653	12.64	1	6682900			31924	4756	15768	15832	37015;37016;37017;37018	37016					0.10526923719623937
SLLQHLIGL	9	Unmodified	_SLLQHLIGL_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.3113891482353	2	497.30821	992.601866	2.9906	0.0014873	3.1504	0.0015667	6.141	0.003054	497.309867465038	75.888	1.1427	76.21	75.519	76.662	0.32163					94	36	4	0	0	0	0.007852	4	31706	31706;31745;31785;31846		111.29	22.383	1	6966500			31925	4756	15768	15832	37019;37020;37021;37022	37019					0.10526923719623937
SLLQHLIGL	9	Unmodified	_SLLQHLIGL_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.3101074099541	2	497.30821	992.601866	3.1695	0.0015762	0.31192	0.00015512	3.4814	0.0017313	497.30848560160655	74.706	0.6765	76.012	75.728	76.404	1.3063					53	21	3	0	0	0	0.026734	4	31318	31276;31318;31396;31443		92.653	10.141	1	15949000			31926	4756	15768	15832	37023;37024;37025;37026	37024					0.10526923719623937
SLLQHLIGL	9	Unmodified	_SLLQHLIGL_					0	0	0		ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	ENSG00000185686|ENST00000405655|PRAME	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.3089782595634	2	497.30821	992.601866	2.8936	0.001439	0.36476	0.0001814	3.2584	0.0016204	497.30862011364417	74.145	0.68586	75.941	75.717	76.403	1.7962					56	21	4	0	0	0	0.015029	4	31065	31065;31107;31146;31189		103.35	13.927	1	21802000			31927	4756	15768	15832	37027;37028;37029;37030	37027					0.10526923719623937
SLLQTLYKV	9	Unmodified	_SLLQTLYKV_					0	0	0		ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1918212771416	2	532.82115	1063.62775	2.1024	0.0011202	0.51645	0.00027517	2.6188	0.0013954	532.8213782771883	60.3	0.31929	60.3	60.124	60.444	0					21	10	3	0	0	0	0.10339	1	25128	25128		14.838	4.0143	1	2358500			31928	1274	15769	15833	37031	37031					0.09847773171213703
SLLQTLYKV	9	Unmodified	_SLLQTLYKV_					0	0	0		ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1921264529228	2	532.82115	1063.62775	2.4528	0.0013069	0.63266	0.00033709	3.0854	0.001644	532.8214406981175	59.64	0.3775	59.966	59.743	60.121	0.32553					23	11	3	0	0	0	0.10339	1	24956	24956		14.838	9.5414	1	2150000			31929	1274	15769	15833	37032	37032					0.09847773171213703
SLLQTLYKV	9	Unmodified	_SLLQTLYKV_					0	0	0		ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	ENSG00000100401|ENST00000356244|RANGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.8217651247978	2	532.82115	1063.62775	0.92086	0.00049065	-0.072635	-3.8702E-05	0.84822	0.00045195	532.8210790459544	58.389	0.4005	59.807	59.634	60.035	1.4181					29	12	3	0	0	0	0.040497	1	24483	24483		75.761	37.787	1	12464000			31930	1274	15769	15833	37033	37033					0.09847773171213703
SLLRELFTL	9	Unmodified	_SLLRELFTL_					0	0	0			REV__ENST00000535170.5_1_7:99638839-99639052:+|nuORF	REV__ENST00000535170.5_1_7:99638839-99639052:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3066894412041	2	546.326599	1090.63865	2.3594	0.001289	0.93687	0.00051184	3.2963	0.0018009	546.3269448933894	71.064	0.32499	72.406	72.364	72.689	1.3415					33	10	4	0	0	0	0.04812	1	29820	29820		69.105	2.6482	1	28931000	+		31931	13740	15770	15834	37034	37034					0.09695175545539314
SLLRPARPSH	10	Unmodified	_SLLRPARPSH_					0	0	0			REV__nc|ENSG00000130821|P48029-2|SLC6A8	REV__nc|ENSG00000130821|P48029-2|SLC6A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3310424685478	2	567.330539	1132.64652	2.677	0.0015188	1.1545	0.00065498	3.8315	0.0021737	567.3310613782425	73.454	1.2245	75.25	74.184	75.409	1.7962					84	38	3	0	0	0	0.8882	1	30629	30629		2.7352	0.89096	1	3948400	+		31932	14427	15771	15835	37035	37035					0.0855074758567298
SLLRPRHKK	9	Unmodified	_SLLRPRHKK_					0	0	0		nc|ENSG00000118515|O00141-3|SGK1	nc|ENSG00000118515|O00141-3|SGK1	nc|ENSG00000118515|O00141-3|SGK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	378.5784789919853	3	378.912125	1133.71454	0.49153	0.00018625	1.7611	0.00066729	2.2526	0.00085354	378.9128010190476	28.715	0.30204	30.513	30.298	30.6	1.7987					27	9	4	0	0	0	0.11944	1	11986	11986		0.20686	0	1	9487600			31933	7858	15772	15836	37036	37036					0.15303617236327227
SLLRSIFTV	9	Unmodified	_SLLRSIFTV_					0	0	0		ENSG00000108773|ENST00000225916|KAT2A	ENSG00000108773|ENST00000225916|KAT2A	ENSG00000108773|ENST00000225916|KAT2A	MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3145019412041	2	518.313492	1034.61243	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.007	1	67.916	67.416	68.416	1.9085								0	0	0	0.10525	1	27692	27692		33.445	4.3633	1				31934	1646	15773	15837	37037	37037					0.09650906374031365
SLLRVGWSV	9	Unmodified	_SLLRVGWSV_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.7990905642509	2	508.798009	1015.58147	2.157	0.0010975	1.5335	0.00078024	3.6905	0.0018777	508.7988374348058	57.963	0.38616	57.963	57.753	58.139	0					20	11	2	0	0	0	0.13623	2	24193	24141;24193		40.239	11.158	1	1144000			31935	5246	15774	15838	37038;37039	37039					0.07429753059807354
SLLRVGWSV	9	Unmodified	_SLLRVGWSV_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.7992736697197	2	508.798009	1015.58147	2.5511	0.001298	0.090171	4.5879E-05	2.6413	0.0013439	508.79840409831064	57.389	0.32022	57.712	57.535	57.855	0.32298					19	10	2	0	0	0	0.11606	2	24083	24039;24083		43.982	14.9	1	1776700			31936	5246	15774	15838	37040;37041	37041					0.07429753059807354
SLLRVGWSV	9	Unmodified	_SLLRVGWSV_					0	0	0		ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	ENSG00000214753|ENST00000301785|HNRNPUL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7993652224541	2	508.798009	1015.58147	0.79206	0.000403	0.48018	0.00024431	1.2722	0.00064731	508.79825312118254	55.621	0.34146	57.589	57.469	57.811	1.9684					20	14	2	0	0	0	0.099383	1	23350	23350		49.527	5.7549	1	2555900			31937	5246	15774	15838	37042	37042					0.07429753059807354
SLLSHVEQL	9	Unmodified	_SLLSHVEQL_					0	0	0		ENST00000376664.10_1_1:11735929-11741152:-|nuORF;chr1:11676135-11676848|121|35.23|0.64|5.79|-|2|None,MAD2L2|1;ENSG00000116670|ENST00000376692|MAD2L2	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2852050662041	2	513.284931	1024.55531	2.2734	0.0011669	0.18329	9.4083E-05	2.4567	0.001261	513.2849915157923	49.141	0.47341	49.141	48.842	49.316	0					35	14	3	0	0	0	0.0033884	2	20485	20485;20535		126.57	48.417	1	3310300			31938	6192	15775	15839	37043;37044	37043					0.04401439097682669
SLLSHVEQL	9	Unmodified	_SLLSHVEQL_					0	0	0		ENST00000376664.10_1_1:11735929-11741152:-|nuORF;chr1:11676135-11676848|121|35.23|0.64|5.79|-|2|None,MAD2L2|1;ENSG00000116670|ENST00000376692|MAD2L2	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2863036990166	2	513.284931	1024.55531	1.8901	0.00097018	1.315	0.00067497	3.2051	0.0016451	513.2854921353124	48.626	0.40768	48.957	48.725	49.133	0.33034					30	12	3	0	0	0	0.00026547	3	20390	20345;20390;20428		139.14	42.854	1	4674200			31939	6192	15775	15839	37045;37046;37047	37046					0.04401439097682669
SLLSHVEQL	9	Unmodified	_SLLSHVEQL_					0	0	0		ENST00000376664.10_1_1:11735929-11741152:-|nuORF;chr1:11676135-11676848|121|35.23|0.64|5.79|-|2|None,MAD2L2|1;ENSG00000116670|ENST00000376692|MAD2L2	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2858154177666	2	513.284931	1024.55531	2.3761	0.0012196	2.3318	0.0011969	4.7079	0.0024165	513.2862430148315	46.892	1.1479	48.274	47.869	49.017	1.3825					94	35	4	0	0	0	4.8155E-05	3	19754	19715;19754;19793		152.41	63.458	1	26779000			31940	6192	15775	15839	37048;37049;37050	37049					0.04401439097682669
SLLSHVEQL	9	Unmodified	_SLLSHVEQL_					0	0	0		ENST00000376664.10_1_1:11735929-11741152:-|nuORF;chr1:11676135-11676848|121|35.23|0.64|5.79|-|2|None,MAD2L2|1;ENSG00000116670|ENST00000376692|MAD2L2	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	ENST00000376664.10_1_1:11735929-11741152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2861205935478	2	513.284931	1024.55531	2.0713	0.0010632	2.9225	0.0015001	4.9938	0.0025633	513.2865258262956	46.419	0.98955	48.389	48.003	48.993	1.9703					83	31	4	0	0	0	4.34E-05	2	19536	19536;19578		155.03	66.072	1	28191000			31941	6192	15775	15839	37051;37052	37051					0.04401439097682669
SLLSMSFSL	9	Unmodified	_SLLSMSFSL_					0	0	0			REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7579528689384	2	492.757161	983.499769	1.0185	0.00050187	0.23643	0.0001165	1.2549	0.00061837	492.75710605357756	58.099	0.54451	60.068	59.702	60.247	1.969					24	17	2	0	0	0	0.19075	1	24343	24343		34.102	0	1	2362700	+		31942	10493	15776	15840	37053	37053					0.007358895857009884
SLLSSVFKL	9	Unmodified	_SLLSSVFKL_					0	0	0		ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.3045226931572	2	497.302593	992.590633	2.6347	0.0013102	2.1098	0.0010492	4.7445	0.0023594	497.302765885724	77.336	0.31635	77.653	77.479	77.796	0.31653					13	9	2	0	0	0	0.28372	1	32352	32352		26.268	3.5319	1	828570			31943	2574	15777	15841	37054	37054					0.09404101625477779
SLLSSVFKL	9	Unmodified	_SLLSSVFKL_					0	0	0		ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	ENSG00000133597|ENST00000072869|ADCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.3047057986259	2	497.302593	992.590633	2.484	0.0012353	0.89402	0.0004446	3.378	0.0016799	497.3034668200106	76.21	0.358	77.504	77.311	77.669	1.2938					17	11	2	0	0	0	0.1109	1	31990	31990		45.7	1.8413	1	2948800			31944	2574	15777	15841	37055	37055					0.09404101625477779
SLLSYLEQL	9	Unmodified	_SLLSYLEQL_					0	0	0			REV__nc|ENSG00000131778|Q86WJ1-4|CHD1L	REV__nc|ENSG00000131778|Q86WJ1-4|CHD1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2971679568291	2	533.294965	1064.57538	5.5738	0.0029725	-1.5947	-0.00085044	3.9791	0.002122	533.2938335710636	89.199	0.51451	90.219	89.914	90.429	1.0199					25	15	2	0	0	0	0.076627	1	37599	37599		57.471	0	1	2541300	+		31945	9827	15778	15842	37056	37056					0.04567190037596447
SLLTHIQNL	9	Unmodified	_SLLTHIQNL_					0	0	0		nc|ENSG00000064419|Q9Y5L0-3|TNPO3;ENSG00000064419|ENST00000265388|TNPO3;nc|ENSG00000064419|Q9Y5L0-1|TNPO3;TNPO3|p.A113Qfs*25|1|0.06|ENSG00000064419|chr7:129017041-129017041|C/-|frameshift_variant;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3;nc|ENSG00000064419|Q9Y5L0-5|TNPO3	nc|ENSG00000064419|Q9Y5L0-3|TNPO3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1403076052666	2	519.800749	1037.58694	2.2576	0.0011735	-1.8872	-0.00098096	0.37039	0.00019253	519.8003311808499	50.072	0.16177	50.072	49.958	50.12	0					7	4	2	0	0	0	0.11518	1	20873	20873		7.2892	2.96	1	418250			31946	772;7828	15779	15843	37057	37057					0.06965431851608628
SLLTHLPRV	9	Unmodified	_SLLTHLPRV_					0	0	0			REV__chrX:49072650-49072823|136|13.97|0.0|20.41|-|1|PRAF2,None|1	REV__chrX:49072650-49072823|136|13.97|0.0|20.41|-|1|PRAF2,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	518.8218261599541	2	518.319109	1034.62366	2.4402	0.0012648	-2.0634	-0.0010695	0.37684	0.00019532	518.317196125843	82.915	0.49106	82.915	82.677	83.168	0					49	15	4	0	0	0	0.63129	1	34606	34606		10.074	0.72649	1	11342000	+		31947	8354	15780	15844	37058	37058					0.10773728468188892
SLLTIIPLLI	10	Unmodified	_SLLTIIPLLI_					0	0	0			REV__tr|A0A7D6VNH0|A0A7D6VNH0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17840PE=4SV=1	REV__tr|A0A7D6VNH0|A0A7D6VNH0_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17840PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	365.7285034060478	3	365.917771	1094.73148	0.1578	5.7742E-05	1.8873	0.00069058	2.0451	0.00074832	365.9184046604928	22.417	0.39581	24.033	23.8	24.196	1.6158					16	12	2	0	0	0	0.12549	1	9337	9337		1.7423	0	1	334150	+		31948	15335	15781	15845	37059	37059					0.18790680278902983
SLLTRASSS	9	Unmodified	_SLLTRASSS_					0	0	0		ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	921.5039550662041	1	921.499986	920.49271	3.1264	0.002881	1.5711	0.0014478	4.6975	0.0043287	921.5016624401344	103.6	0.12028	103.77	103.69	103.81	0.16216					12	5	3	0	0	0	0.76456	1	43725	43725		4.756	0	1	11894000			31949	5358	15782	15846	37060	37060					0.029282930294698417
SLLTRASSS	9	Unmodified	_SLLTRASSS_					0	0	0		ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	921.499986	920.49271	1.1354	0.0010462	2.7224	0.0025087	3.8577	0.0035549	921.5017542631906	103.66	0.11521	103.66	103.6	103.71	0	-0.051356	0.0010641	NaN	4.756	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13308000			31950	5358	15782	15846							0.029282930294698417
SLLTRASSS	9	Unmodified	_SLLTRASSS_					0	0	0		ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	ENSG00000243978|ENST00000520821|RTL9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	921.499986	920.49271	2.8068	0.0025865	1.141	0.0010514	3.9478	0.0036379	921.5012307376159	103.65	0.11031	103.71	103.64	103.75	0.059502	-0.004256	-0.00039307	NaN	4.756	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15033000			31951	5358	15782	15846							0.029282930294698417
SLLTVVYPV	9	Unmodified	_SLLTVVYPV_					0	0	0			REV__nc|ENSG00000203485|Q27J81-3|INF2	REV__nc|ENSG00000203485|Q27J81-3|INF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7973815798759	2	495.797143	989.579734	2.1898	0.0010857	-2.558	-0.0012682	-0.36815	-0.00018253	495.79611793143357	68.253	0.46484	69.631	69.394	69.859	1.3778					29	14	3	0	0	0	0.1735	1	28684	28684		36.044	0	1	3909000	+		31952	11759	15783	15847	37061	37061					0.0845269925117691
SLLTVVYPV	9	Unmodified	_SLLTVVYPV_					0	0	0			REV__nc|ENSG00000203485|Q27J81-3|INF2	REV__nc|ENSG00000203485|Q27J81-3|INF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	495.797143	989.579734	2.1898	0.0010857	-2.558	-0.0012682	-0.36815	-0.00018253	495.79611793143357	68.253	0.46484	69.631	69.394	69.859	1.3778	-0.056635	-9.1517E-05	NaN	36.044	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3909000	+		31953	11759	15783	15847							0.0845269925117691
SLLVGSLVAA	10	Unmodified	_SLLVGSLVAA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2885314822197	2	465.286943	928.559333	2.5746	0.0011979	-0.15229	-7.0857E-05	2.4223	0.0011271	465.28734429829257	63.537	1.1502	64.95	64.596	65.746	1.4134					104	36	5	0	0	0	0.065879	1	26598	26598		103.75	0	1	231860000	+		31954	11085	15784	15848	37062	37062					0.09219528591358994
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	486.3110534548759	2	486.310418	970.606283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.818	1	90.818	90.318	91.318	0								0	0	0	0.26021	1	37957	37957		21.747	0	1		+		31955	12270	15785	15849	37063	37063					0.11980388142512766
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3130676150322	2	486.310418	970.606283	5.2661	0.0025609	-0.3959	-0.00019253	4.8702	0.0023684	486.31030131337087	89.584	0.31189	90.604	90.397	90.708	1.0199					15	9	2	0	0	0	0.24063	1	37723	37723		28.487	0	1	2395500	+		31956	12270	15785	15849	37064	37064					0.11980388142512766
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3123657107353	2	486.310418	970.606283	4.6518	0.0022622	-0.28351	-0.00013787	4.3683	0.0021244	486.3102036793753	89.099	0.41228	90.504	90.264	90.677	1.4045					21	12	2	0	0	0	0.37357	1	37558	37558		21.747	0	1	2779800	+		31957	12270	15785	15849	37065	37065					0.11980388142512766
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	486.310418	970.606283	3.3783	0.0016429	-2.9784	-0.0014484	0.3999	0.00019448	486.3087499494189	90.381	0.27282	90.59	90.372	90.645	0.20904	0.023919	-0.0019134	NaN	28.487	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1173400	+		31958	12270	15785	15849							0.11980388142512766
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	486.310418	970.606283	5.2661	0.0025609	-0.3959	-0.00019253	4.8702	0.0023684	486.31030131337087	89.584	0.31189	90.604	90.397	90.708	1.0199	0.03816	0.00059839	NaN	28.487	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2395500	+		31959	12270	15785	15849							0.11980388142512766
SLLVKAVEL	9	Unmodified	_SLLVKAVEL_					0	0	0			REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	REV__ENST00000285093.14_1_18:47310053-47310263:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	486.310418	970.606283	4.6518	0.0022622	-0.28351	-0.00013787	4.3683	0.0021244	486.3102036793753	89.099	0.41228	90.504	90.264	90.677	1.4045	-0.062079	0.0007077	NaN	28.487	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2779800	+		31960	12270	15785	15849							0.11980388142512766
SLLWMKLR	8	Unmodified	_SLLWMKLR_					0	0	0		ENST00000486040.1_1_7:2278089-2278272:-|nuORF	ENST00000486040.1_1_7:2278089-2278272:-|nuORF	ENST00000486040.1_1_7:2278089-2278272:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.2844116091728	2	523.812605	1045.61066	1.7542	0.0009189	1.7848	0.00093489	3.539	0.0018538	523.8132722350825	46.575	0.17657	48.545	48.41	48.587	1.9703					8	5	2	0	0	0	2.3239	1	19484	19484		4.756	0.81161	1	433500			31961	6861	15786	15850	37066	37066					0.08967574084431362
SLLWVIVSVLH	11	Unmodified	_SLLWVIVSVLH_					0	0	0			REV__ENSG00000184451|ENST00000332438|CCR10	REV__ENSG00000184451|ENST00000332438|CCR10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5924560427666	3	422.592058	1264.75434	0.67704	0.00028611	1.0181	0.00043022	1.6951	0.00071633	422.59229849815495	37.267	0.50903	37.267	36.985	37.494	0					53	25	3	0	0	0	1.0362	1	15697	15697		1.3296	0.55311	1	5841400	+		31962	11426	15787	15851	37067	37067					0.13255699396381715
SLLWVIVSVLH	11	Unmodified	_SLLWVIVSVLH_					0	0	0			REV__ENSG00000184451|ENST00000332438|CCR10	REV__ENSG00000184451|ENST00000332438|CCR10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1953613162041	4	317.195862	1264.75434	0.74877	0.00023751	-0.91	-0.00028865	-0.16122	-5.1139E-05	317.1954584195939	35.724	0.53128	36.026	35.734	36.265	0.30197					97	49	3	0	0	0	1.0191	1	15054	15054		2.6312	0	1	35490000	+		31963	11426	15787	15851	37068	37068					0.13255699396381715
SLLWVIVSVLH	11	Unmodified	_SLLWVIVSVLH_					0	0	0			REV__ENSG00000184451|ENST00000332438|CCR10	REV__ENSG00000184451|ENST00000332438|CCR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	317.4472534060478	4	317.195862	1264.75434	0.14832	4.7045E-05	-0.28981	-9.1926E-05	-0.14149	-4.4881E-05	317.19572652283154	33.632	0.37411	35.455	35.255	35.629	1.8227					80	35	3	0	0	0	1.0191	1	14079	14079		2.6312	1.3016	1	55195000	+		31964	11426	15787	15851	37069	37069					0.13255699396381715
SLLYDDIFTF	10	Unmodified	_SLLYDDIFTF_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3060180544853	2	617.305529	1232.59651	0.62812	0.00038774	0.41328	0.00025512	1.0414	0.00064287	617.3054047273464	53.464	1.4157	55.433	55.111	56.526	1.9697					110	46	3	0	0	0	0.44465	1	22692	22692		30.637	9.0996	1	11747000	+		31965	9069	15788	15852	37070	37070					-0.010488446535418916
SLLYNVPAV	9	Unmodified	_SLLYNVPAV_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-11|APP	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2791015505791	2	488.279118	974.543683	2.953	0.0014419	-1.0365	-0.00050611	1.9164	0.00093576	488.2786994177672	63.168	0.31582	64.582	64.376	64.691	1.4134					19	9	3	0	0	0	0.076627	1	26489	26489		57.471	13.064	1	1710400			31966	2989	15789	15853	37071	37071					0.05539242074326012
SLLYNVPAV	9	Unmodified	_SLLYNVPAV_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-11|APP	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2794372439384	2	488.279118	974.543683	2.7637	0.0013494	-0.4204	-0.00020527	2.3433	0.0011442	488.2785092085969	62.603	0.28172	64.547	64.407	64.688	1.9444					21	8	3	0	0	0	0.031324	1	26276	26276		85.357	21.794	1	2193100			31967	2989	15789	15853	37072	37072					0.05539242074326012
SLMDPNKFLLL	11	Unmodified	_SLMDPNKFLLL_					0	0	0		ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.A932Lfs*6|1|0.45|ENSG00000159459|chr15:43022747-43022747|C/-|frameshift_variant;UBR1|p.D1423Vfs*11|1|0.83|ENSG00000159459|chr15:42976794-42976818|GAACTAACTGAAGAAGGCTGCAGAT/-|frameshift_variant;UBR1|p.F1551Gfs*31|1|0.15|ENSG00000159459|chr15:42963962-42963984|CAATATTCCTGGAAGAGCAGGAA/-|frameshift_variant	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.8623535037041	2	645.859949	1289.70534	3.2098	0.0020731	0.97235	0.000628	4.1822	0.0027011	645.8607987441845	81.677	0.30906	82.91	82.718	83.027	1.2332					21	9	3	0	0	0	0.12432	1	34300	34300		51.415	20.147	1	1581800			31968	3531	15790	15854	37073	37073					0.07208043045125123
SLMDPNKFLLL	11	Unmodified	_SLMDPNKFLLL_					0	0	0		ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.A932Lfs*6|1|0.45|ENSG00000159459|chr15:43022747-43022747|C/-|frameshift_variant;UBR1|p.D1423Vfs*11|1|0.83|ENSG00000159459|chr15:42976794-42976818|GAACTAACTGAAGAAGGCTGCAGAT/-|frameshift_variant;UBR1|p.F1551Gfs*31|1|0.15|ENSG00000159459|chr15:42963962-42963984|CAATATTCCTGGAAGAGCAGGAA/-|frameshift_variant	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.8615600466728	2	645.859949	1289.70534	3.0758	0.0019866	0.10758	6.9479E-05	3.1834	0.002056	645.8599507417385	81.233	0.37064	82.928	82.703	83.074	1.6959					21	11	3	0	0	0	0.10312	1	34081	34081		55.235	18.16	1	1526200			31969	3531	15790	15854	37074	37074					0.07208043045125123
SLMDPNKFLLL	11	Unmodified	_SLMDPNKFLLL_					0	0	0		ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.A932Lfs*6|1|0.45|ENSG00000159459|chr15:43022747-43022747|C/-|frameshift_variant;UBR1|p.D1423Vfs*11|1|0.83|ENSG00000159459|chr15:42976794-42976818|GAACTAACTGAAGAAGGCTGCAGAT/-|frameshift_variant;UBR1|p.F1551Gfs*31|1|0.15|ENSG00000159459|chr15:42963962-42963984|CAATATTCCTGGAAGAGCAGGAA/-|frameshift_variant	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	645.859949	1289.70534	2.5163	0.0016252	-0.93863	-0.00060623	1.5776	0.0010189	645.859071776974	83.212	0.18237	83.212	83.076	83.258	0	0.21625	-0.0014952	NaN	55.235	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	271070			31970	3531	15790	15854							0.07208043045125123
SLMDPNKFLLL	11	Unmodified	_SLMDPNKFLLL_					0	0	0		ENSG00000159459|ENST00000290650|UBR1;nc|ENSG00000159459|Q8IWV7-2|UBR1;UBR1|p.A932Lfs*6|1|0.45|ENSG00000159459|chr15:43022747-43022747|C/-|frameshift_variant;UBR1|p.D1423Vfs*11|1|0.83|ENSG00000159459|chr15:42976794-42976818|GAACTAACTGAAGAAGGCTGCAGAT/-|frameshift_variant;UBR1|p.F1551Gfs*31|1|0.15|ENSG00000159459|chr15:42963962-42963984|CAATATTCCTGGAAGAGCAGGAA/-|frameshift_variant	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	645.859949	1289.70534	2.1486	0.0013877	0.41492	0.00026798	2.5635	0.0016557	645.8604735862293	82.653	0.18369	82.933	82.796	82.98	0.2802	-0.062838	0.00025323	NaN	55.235	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	347550			31971	3531	15790	15854							0.07208043045125123
SLMEILYTL	9	Unmodified	_SLMEILYTL_					0	0	0		ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7944824099541	2	541.793743	1081.57293	3.7431	0.002028	-1.5	-0.00081269	2.2431	0.0012153	541.7925862775916	97.364	0.12467	97.649	97.57	97.694	0.28442					9	4	3	0	0	0	0.031324	1	40976	40976		85.357	40.95	1	4002100			31972	4034	15791	15855	37075	37075					0.03541018308328603
SLMEILYTL	9	Unmodified	_SLMEILYTL_					0	0	0		ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	541.793743	1081.57293	2.7476	0.0014886	-2.1331	-0.0011557	0.61441	0.00033288	541.793274172288	97.514	0.093132	97.605	97.527	97.62	0.090881	-0.0037741	-0.00016246	NaN	85.357	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	436560			31973	4034	15791	15855							0.03541018308328603
SLMEILYTL	9	Unmodified	_SLMEILYTL_					0	0	0		ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	ENSG00000168434|ENST00000307149|COG7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.793743	1081.57293	3.3062	0.0017913	-3.2952	-0.0017853	0.010929	5.9211E-06	541.7918469844693	97.266	0.085571	97.572	97.508	97.594	0.30619	-0.036395	-0.0014217	NaN	85.357	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3147200			31974	4034	15791	15855							0.03541018308328603
SLMIACIIK	9	Unmodified	_SLMIACIIK_					0	0	0			REV__tr|A0A7D6ZXF9|A0A7D6ZXF9_9CLOTGerMNdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22815PE=4SV=1	REV__tr|A0A7D6ZXF9|A0A7D6ZXF9_9CLOTGerMNdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2885009646416	2	496.287574	990.560595	1.5182	0.00075347	-0.55743	-0.00027665	0.96077	0.00047682	496.2877137235091	76.893	0.37557	76.893	76.719	77.095	0					26	11	3	0	0	0	0.51189	2	32044	31994;32044		14.838	0	1	2303500	+		31975	15760	15792	15856	37076;37077	37077					0.06493703364265002
SLMIACIIK	9	Unmodified	_SLMIACIIK_					0	0	0			REV__tr|A0A7D6ZXF9|A0A7D6ZXF9_9CLOTGerMNdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22815PE=4SV=1	REV__tr|A0A7D6ZXF9|A0A7D6ZXF9_9CLOTGerMNdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_22815PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2875549197197	2	496.287574	990.560595	2.878	0.0014283	-1.6838	-0.00083566	1.1941	0.00059263	496.2867309574078	76.355	0.33797	76.677	76.484	76.822	0.32163					23	10	3	0	0	0	0.51189	1	31893	31893		14.838	0	1	2777500	+		31976	15760	15792	15856	37078	37078					0.06493703364265002
SLMITCVTI	9	Carbamidomethyl (C),Oxidation (M)	_SLM(Oxidation (M))ITC(Carbamidomethyl (C))VTI_	SLMITC(1)VTI	SLM(1)ITCVTI	SLMITC(51)VTI	SLM(51)ITCVTI	0	1	1		ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	ENSG00000128519|ENST00000249284|TAS2R16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2694579958916	2	527.269578	1052.5246	0.22415	0.00011819	-0.10195	-5.3757E-05	0.1222	6.443E-05	527.2698518232784	36.556	0.38319	37.832	37.667	38.05	1.2762					38	17	3	0	0	0	0.09539	2	15306	15306;15348		50.855	7.0826	1	3055400			31977	2369	15793	15857	37079;37080	37079	4	44			0.0004420139678131818
SLMSHAIEL	9	Unmodified	_SLMSHAIEL_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7609435915947	2	500.760235	999.505917	1.9281	0.00096553	0.589	0.00029495	2.5171	0.0012605	500.7606007183168	48.479	0.29917	48.479	48.317	48.617	0					19	9	3	0	0	0	0.10294	1	20240	20240		48.346	18.121	1	931670			31978	2756	15794	15858	37081	37081					0.0061440781720421
SLMSHAIEL	9	Unmodified	_SLMSHAIEL_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7623474001884	2	500.760235	999.505917	2.3219	0.0011627	0.48711	0.00024393	2.809	0.0014066	500.76044022928613	47.993	0.29942	48.323	48.162	48.462	0.33034					13	9	2	0	0	0	0.20671	2	20115	20115;20158		32.305	16.458	1	882430			31979	2756	15794	15858	37082;37083	37082					0.0061440781720421
SLMSHAIEL	9	Unmodified	_SLMSHAIEL_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.3053771853447	2	500.760235	999.505917	1.7404	0.00087151	-0.72885	-0.00036498	1.0115	0.00050653	500.7595102370967	46.369	0.36979	47.744	47.555	47.925	1.3751					33	11	4	0	0	0	0.047433	1	19430	19430		48.346	25.197	1	4400400			31980	2756	15794	15858	37084	37084					0.0061440781720421
SLMSHAIEL	9	Unmodified	_SLMSHAIEL_					0	0	0		ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	ENSG00000137055|ENST00000397292|PLAA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7608520388603	2	500.760235	999.505917	1.0387	0.00052012	0.40024	0.00020042	1.4389	0.00072054	500.75986315139176	45.891	0.4006	47.861	47.663	48.064	1.9703					33	12	4	0	0	0	0.076627	1	19183	19183		57.471	27.247	1	3147800			31981	2756	15794	15858	37085	37085					0.0061440781720421
SLMSNFSDVPM	11	Unmodified	_SLMSNFSDVPM_					0	0	0			REV__ENSG00000050344|ENST00000056233|NFE2L3	REV__ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.2762939333916	2	614.272849	1226.53115	1.9131	0.0011752	2.868	0.0017617	4.7811	0.0029369	614.2753660991499	68.83	0.47677	70.195	69.936	70.413	1.3657					46	14	4	0	0	0	0.24501	1	28874	28874		36.506	0.37917	1	7303100	+		31982	8620	15795	15859	37086	37086					-0.07305905442535732
SLMSTSEVL	9	Unmodified	_SLMSTSEVL_					0	0	0		CMYA5|p.I1537Hfs*7|1|0.1|ENSG00000164309|chr5:79733373-79733374|-/C|frameshift_variant;CMYA5|p.L2315Tfs*2|1|0.05|ENSG00000164309|chr5:79735707-79735708|-/A|frameshift_variant;ENSG00000164309|ENST00000446378|CMYA5	CMYA5|p.I1537Hfs*7|1|0.1|ENSG00000164309|chr5:79733373-79733374|-/C|frameshift_variant	CMYA5|p.I1537Hfs*7|1|0.1|ENSG00000164309|chr5:79733373-79733374|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.7466613650322	2	483.74425	965.473948	2.6603	0.0012869	1.8645	0.00090195	4.5248	0.0021889	483.7455074478234	87.717	0.44772	87.717	87.49	87.938	0					60	14	7	0	0	0	0.59203	1	36627	36627		11.64	3.7301	1	10327000			31983	315	15796	15860	37087	37087					-0.010170046565804114
SLMSWSAIL	9	Unmodified	_SLMSWSAIL_					0	0	0		ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	ENSG00000126709|ENST00000361157|IFI6	ENSG00000126709|ENST00000361157|IFI6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1007.525134265423	1	1007.52303	1006.51575	2.2982	0.0023155	-0.67467	-0.00067974	1.6236	0.0016358	1007.523141399812	90.061	0.35121	90.061	89.905	90.256	0					16	10	2	0	0	0	0.09539	1	37630	37630		50.855	14.811	1	1267300			31984	2312	15797	15861	37088	37088					0.012755958225966424
SLMSWSAIL	9	Unmodified	_SLMSWSAIL_					0	0	0		ENSG00000126709|ENST00000361157|IFI6;nc|ENSG00000126709|P09912-2|IFI6;nc|ENSG00000126709|P09912-3|IFI6	ENSG00000126709|ENST00000361157|IFI6	ENSG00000126709|ENST00000361157|IFI6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1007.52794188261	1	1007.52303	1006.51575	2.8853	0.002907	-1.6618	-0.0016743	1.2234	0.0012326	1007.5214331922599	89.577	0.31938	89.801	89.615	89.935	0.2236					20	9	3	0	0	0	0.10294	1	37493	37493		48.346	12.302	1	1512200			31985	2312	15797	15861	37089	37089					0.012755958225966424
SLMWTLLK	8	Unmodified	_SLMWTLLK_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2880432009697	2	496.285889	990.557224	2.878	0.0014283	1.7122	0.00084975	4.5902	0.002278	496.2867309574078	76.355	0.33797	76.677	76.484	76.822	0.32163					23	10	3	0	0	0	0.7528	1	31940	31940		25.399	2.2509	1	2777500			31986	613	15798	15862	37090	37090					0.0615677658192908
SLMWTLLK	8	Unmodified	_SLMWTLLK_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2887145876884	2	496.285889	990.557224	2.7961	0.0013877	0.91237	0.0004528	3.7085	0.0018405	496.2871364909428	75.17	0.74208	76.476	76.12	76.862	1.3063					66	23	5	0	0	0	0.36684	3	31542	31497;31542;31592		61.357	11.424	1	15279000			31987	613	15798	15862	37091;37092;37093	37092					0.0615677658192908
SLMWTLLK	8	Unmodified	_SLMWTLLK_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2891113162041	2	496.285889	990.557224	2.816	0.0013975	3.2888	0.0016322	6.1048	0.0030297	496.28738337798177	74.653	0.75006	76.435	76.228	76.978	1.7817					33	23	2	0	0	0	0.43377	3	31282	31282;31329;31368		52.268	10.174	1	9620100			31988	613	15798	15862	37094;37095;37096	37094					0.0615677658192908
SLMWTLLK	8	Unmodified	_SLMWTLLK_					0	0	0		ENST00000534491.5_1_11:3114755-3187956:-|nuORF;nc|ENSG00000021762|Q9H0X9-3|OSBPL5;nc|ENSG00000021762|Q9H0X9-2|OSBPL5;OSBPL5|p.P786Sfs*56|1|0.44|ENSG00000021762|chr11:3090600-3090601|-/CT|frameshift_variant;ENSG00000021762|ENST00000263650|OSBPL5	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	ENST00000534491.5_1_11:3114755-3187956:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	496.285889	990.557224	1.5182	0.00075347	2.8386	0.0014088	4.3568	0.0021622	496.2877137235091	76.893	0.37557	76.893	76.719	77.095	0	0.27284	0.00052259	NaN	61.357	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2303500			31989	613	15798	15862							0.0615677658192908
SLNALLGV	8	Unmodified	_SLNALLGV_					0	0	0			REV__nc|ENSG00000008710|P98161-2|PKD1	REV__nc|ENSG00000008710|P98161-2|PKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.7399780154228	2	393.739628	785.464704	0.81028	0.00031904	-0.31048	-0.00012225	0.49981	0.00019679	393.7396114007865	57.091	0.32697	58.505	58.369	58.696	1.4145					18	10	2	0	0	0	0.52405	1	23932	23932		46.021	1.6139	1	12466000	+		31990	8522	15799	15863	37097	37097					0.0633901484004582
SLNAPHGLCV	10	Unmodified	_SLNAPHGLCV_					0	0	0		ENST00000484048.1_1_3:23848730-23849168:+|nuORF	ENST00000484048.1_1_3:23848730-23849168:+|nuORF	ENST00000484048.1_1_3:23848730-23849168:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.2171813845634	3	337.507777	1009.5015	-1.164	-0.00039287	-2.0388	-0.00068812	-3.2028	-0.001081	337.5077390714242	90.838	0.28533	90.838	90.682	90.968	0					10	8	2	0	0	0	0.12555	1	37990	37990		0.77653	0.50751	1	592620			31991	6848	15800	15864	37098	37098					-0.0028705660569130487
SLNEDNFSLML	11	Unmodified	_SLNEDNFSLML_					0	0	0		ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	ENSG00000166415|ENST00000360509|WDR72	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8052856326103	2	641.802828	1281.5911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.64	1	46.64	46.14	47.14	0								0	0	0	0.63775	1	19496	19496		4.5289	0	1				31992	3900	15801	15865	37099	37099					-0.03842891507656532
SLNELQIIL	9	Unmodified	_SLNELQIIL_					0	0	0		ENSG00000206474|ENST00000444197|OR10C1	ENSG00000206474|ENST00000444197|OR10C1	ENSG00000206474|ENST00000444197|OR10C1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	522.2487060427666	2	521.810782	1041.60701	1.9657	0.0010257	1.018	0.00053121	2.9837	0.0015569	521.8112249993262	71.968	0.34925	72.292	72.102	72.451	0.32494					14	10	2	0	0	0	0.10844	1	30113	30113		16.942	0	1	624870			31993	5197	15802	15866	37100	37100					0.08787182791570558
SLNGLEVHL	9	Unmodified	_SLNGLEVHL_					0	0	0		ENST00000493455.6_1_22:26840650-26860128:-|nuORF;ENST00000466781.5_1_22:26849201-26862270:-|nuORF;ENST00000464362.5_1_22:26849201-26861668:-|nuORF;ENST00000439453.5_1_22:26849201-26866860:-|nuORF;ENST00000429411.5_1_22:26849201-26866860:-|nuORF;nc|ENSG00000100099|Q9NQG7-3|HPS4;ENSG00000100099|ENST00000398145|HPS4;HPS4|p.S693Lfs*19|1|0.06|ENSG00000100099|chr22:26453284-26453285|-/GTCCAAAGAAGACGCCCCTAGATTTGAGT|frameshift_variant;nc|ENSG00000100099|Q9NQG7-4|HPS4;ENST00000485842.5_1_22:26849853-26868905:-|nuORF	ENST00000493455.6_1_22:26840650-26860128:-|nuORF	ENST00000493455.6_1_22:26840650-26860128:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2724792361259	2	491.271824	980.529095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.752	1	50.082	49.582	50.582	0.33019								0	0	0	0.27791	1	20847	20847		20.454	5.6154	1				31994	1240	15803	15867	37101	37101					0.03805169926170038
SLNIITVTL	9	Unmodified	_SLNIITVTL_					0	0	0		ENST00000478247.1_1_3:183882805-183888540:+|nuORF;nc|ENSG00000161202|Q92997-2|DVL3;ENSG00000161202|ENST00000313143|DVL3;ENST00000572285.5_1_17:7132676-7132733:-|nuORF;ENSG00000004975|ENST00000005340|DVL2	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	ENST00000478247.1_1_3:183882805-183888540:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.3015930056572	2	487.30005	972.585547	2.5172	0.0012266	-0.50822	-0.00024766	2.0089	0.00097895	487.29977107934457	42.847	0.43792	43.168	42.943	43.381	0.32058					40	14	4	0	0	0	0.037098	1	18033	18033		78.728	2.9672	1	14480000			31995	3590	15804	15868	37102	37102					0.09815797762848888
SLNKLLYHLF	10	Unmodified	_SLNKLLYHLF_					0	0	0		ENSG00000198862|ENST00000361371|LTN1;nc|ENSG00000198862|O94822-3|LTN1	ENSG00000198862|ENST00000361371|LTN1	ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	416.9117919802666	3	416.576408	1246.70739	0.30686	0.00012783	1.135	0.00047282	1.4419	0.00060065	416.57671086937944	32.269	0.68095	32.269	31.854	32.535	0					41	21	3	0	0	0	0.89588	1	13477	13477		1.9064	0.69154	1	1699900			31996	5095	15805	15869	37103	37103					0.09390839845218579
SLNLSPKRGV	10	Unmodified	_SLNLSPKRGV_					0	0	0			REV__ENSG00000127580|ENST00000293883|WDR24	REV__ENSG00000127580|ENST00000293883|WDR24	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1624023318291	2	535.819473	1069.62439	2.2742	0.0012185	-2.0972	-0.0011237	0.17697	9.4823E-05	535.8183241647791	83.981	0.4625	83.981	83.689	84.151	0					45	14	4	0	0	0	0.12556	1	34879	34879		0.35063	0	1	13224000	+		31997	9719	15806	15870	37104	37104					0.09236523117237994
SLPCYQHF	8	Unmodified	_SLPCYQHF_					0	0	0		nc|ENSG00000235718|Q9BY79-2|MFRP;ENSG00000235718|ENST00000619721|MFRP	nc|ENSG00000235718|Q9BY79-2|MFRP	nc|ENSG00000235718|Q9BY79-2|MFRP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.7266723513603	2	497.726195	993.437837	2.7037	0.0013457	-2.6436	-0.0013158	0.060102	2.9914E-05	497.7249480460356	63.638	0.4036	65.583	65.377	65.78	1.9444					24	12	2	0	0	0	0.87935	1	26749	26749		9.3474	0.75416	1	2870000			31998	5318	15807	15871	37105	37105					-0.059144170427885
SLPDIKVYL	9	Unmodified	_SLPDIKVYL_					0	0	0		nc|ENSG00000169220|O43566-4|RGS14;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;nc|ENSG00000169220|O43566-6|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;nc|ENSG00000169220|O43566-5|RGS14;ENSG00000169220|ENST00000408923|RGS14	nc|ENSG00000169220|O43566-4|RGS14	nc|ENSG00000169220|O43566-4|RGS14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3090087771416	2	524.307875	1046.6012	1.9398	0.0010171	-0.77051	-0.00040399	1.1693	0.00061309	524.3075339959123	65.871	0.34939	65.871	65.676	66.025	0					26	10	3	0	0	0	0.23535	2	27428	27428;27481		29.082	4.7636	1	2951100			31999	4074	15808	15872	37106;37107	37106					0.07976084279880524
SLPDIKVYL	9	Unmodified	_SLPDIKVYL_					0	0	0		nc|ENSG00000169220|O43566-4|RGS14;ENST00000514713.5_1_5:176793951-176795930:+|nuORF;nc|ENSG00000169220|O43566-6|RGS14;ENST00000425155.6_1_5:176795054-176799073:+|nuORF;nc|ENSG00000169220|O43566-5|RGS14;ENSG00000169220|ENST00000408923|RGS14	nc|ENSG00000169220|O43566-4|RGS14	nc|ENSG00000169220|O43566-4|RGS14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3063842654228	2	524.307875	1046.6012	2.0964	0.0010991	-1.6479	-0.00086402	0.44845	0.00023513	524.3068924812565	65.363	0.37968	65.69	65.485	65.865	0.32689					26	11	3	0	0	0	0.23535	2	27392	27337;27392		29.082	5.8742	1	3049600			32000	4074	15808	15872	37108;37109	37109					0.07976084279880524
SLPDLWLPL	9	Unmodified	_SLPDLWLPL_					0	0	0		ENST00000323703.10_1_2:27601338-27601512:-|nuORF	ENST00000323703.10_1_2:27601338-27601512:-|nuORF	ENST00000323703.10_1_2:27601338-27601512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3029662966728	2	527.302593	1052.59063	2.1931	0.0011564	0.63922	0.00033706	2.8323	0.0014935	527.3033818999234	81.916	0.18313	81.916	81.794	81.977	0					9	5	2	0	0	0	0.5697	1	34136	34136		12.532	1.7076	1	318870			32001	5862	15809	15873	37110	37110					0.06644101625465737
SLPEDFYHF	9	Unmodified	_SLPEDFYHF_					0	0	0		ENST00000506125.1_1_4:170671685-170679028:-|nuORF;ENSG00000056050|ENST00000393381|HPF1	ENST00000506125.1_1_4:170671685-170679028:-|nuORF	ENST00000506125.1_1_4:170671685-170679028:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	578.3752319216728	2	577.761289	1153.50803	1.0406	0.00060124	1.7882	0.0010332	2.8289	0.0016344	577.76201637174	58.061	0.70155	60.03	59.814	60.516	1.969					30	22	2	0	0	0	0.11333	1	24390	24390		8.5933	3.8373	1	1875400			32002	725	15810	15874	37111	37111					-0.06258840173336466
SLPFGKVVR	9	Unmodified	_SLPFGKVVR_					0	0	0			REV__ENST00000256151.7_1_12:82752058-82752121:-|nuORF	REV__ENST00000256151.7_1_12:82752058-82752121:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.8076049685478	2	501.808377	1001.6022	1.7263	0.00086625	-3.3427	-0.0016774	-1.6164	-0.00081114	501.8063087978377	78.581	1.2359	78.581	78.001	79.237	0					73	39	3	0	0	0	0.77526	1	32679	32679		4.3292	1.7518	1	2518700	+		32003	12163	15811	15875	37112	37112					0.10146343439475913
SLPFHIATL	9	Unmodified	_SLPFHIATL_					0	0	0			REV__L1M4c_dup1405|chr7:66688108-66688812:+|1.034909646104515|0.2989432249510264|1.79|428.0|45|3|anti-sense	REV__L1M4c_dup1405|chr7:66688108-66688812:+|1.034909646104515|0.2989432249510264|1.79|428.0|45|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7869750857353	2	499.78711	997.559667	2.9615	0.0014801	-3.5395	-0.001769	-0.57802	-0.00028889	499.7856897837856	82.451	0.43744	84.121	83.799	84.236	1.67					22	13	2	0	0	0	0.59203	2	34559	34507;34559		11.64	0	1	1983000	+		32004	14255	15812	15876	37113;37114	37114					0.06078948311221666
SLPGKKVG	8	Unmodified	_SLPGKKVG_					0	0	0		ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	393.2508117556572	2	393.247621	784.480688	2.1864	0.00085979	2.8736	0.00113	5.06	0.0019898	393.2495804851318	76.762	0.50676	77.079	76.753	77.259	0.31653					23	15	2	0	0	0	0.89178	1	32093	32093		0.69038	0	1	889580			32005	3796	15813	15877	37115	37115					0.07982721076950838
SLPGKKVG	8	Unmodified	_SLPGKKVG_					0	0	0		ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	393.247621	784.480688	0.090437	3.5564E-05	2.1757	0.00085558	2.2661	0.00089114	393.2493204774589	76.885	0.34541	76.885	76.688	77.033	0	-0.14405	0.00018392	NaN	0.69038	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	527320			32006	3796	15813	15877							0.07982721076950838
SLPGKKVG	8	Unmodified	_SLPGKKVG_					0	0	0		ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	ENSG00000164761|ENST00000297350|TNFRSF11B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	393.247621	784.480688	1.8866	0.0007419	1.2818	0.00050406	3.1684	0.001246	393.24837978496186	75.83	0.30711	77.124	76.974	77.281	1.2938	0.09486	-0.00051911	NaN	0.69038	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	908260			32007	3796	15813	15877							0.07982721076950838
SLPHLPACPW	10	Unmodified	_SLPHLPACPW_					0	0	0		chr19:58312403-58314748|380|11.72|0.0|20.16|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	chr19:58312403-58314748|380|11.72|0.0|20.16|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	chr19:58312403-58314748|380|11.72|0.0|20.16|+|0|TE_info:HERVK3-int,HERVK3-int_dup296,ERVK,LTR,donor,+,58311249,58312403|None,ZNF8-ERVK3-1|3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7835571169853	2	560.784044	1119.55354	3.3341	0.0018697	-2.5439	-0.0014266	0.79016	0.00044311	560.7819969157396	74.482	0.41782	75.8	75.621	76.039	1.318					29	13	3	0	0	0	0.80568	1	31315	31315		11.64	0.14559	1	2507300			32008	236	15814	15878	37116	37116					-0.0014589319196147699
SLPILAVIIL	10	Unmodified	_SLPILAVIIL_					0	0	0			REV__tr|A0A7D6ZHF2|A0A7D6ZHF2_9CLOTPotassium-transportingATPaseATP-bindingsubunitOS=ClostridiumintestinaleOX=36845GN=kdpBPE=3SV=1	REV__tr|A0A7D6ZHF2|A0A7D6ZHF2_9CLOTPotassium-transportingATPaseATP-bindingsubunitOS=ClostridiumintestinaleOX=36845GN=kdpBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2433959841728	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89803	1	7957	7957		0.77653	0	1	155460000	+		32009	15649	15815	15879	37117	37117					0.18194411107424457
SLPKKCPPL	9	Unmodified	_SLPKKCPPL_					0	0	0			REV__ENSG00000174371|ENST00000366548|EXO1	REV__ENSG00000174371|ENST00000366548|EXO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7937194705009	2	491.791338	981.568123	2.3648	0.001163	-0.8998	-0.00044251	1.465	0.00072046	491.7908252851933	78.86	0.48479	79.169	78.864	79.349	0.30932					46	15	4	0	0	0	0.82114	1	32895	32895		1.8442	0	1	13525000	+		32010	11120	15816	15880	37118	37118					0.07660178956189156
SLPKKLALL	9	Unmodified	_SLPKKLALL_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.8362914919853	2	491.836603	981.658653	0.67555	0.00033226	-0.26696	-0.0001313	0.40859	0.00020096	491.8363463256484	37.407	0.35728	38.691	38.537	38.894	1.284					60	24	3	0	0	0	0.10473	3	15707	15669;15707;15747		47.749	20.12	1	12010000			32011	1495	15817	15881	37119;37120;37121	37120					0.1670897127612534
SLPKKLALL	9	Unmodified	_SLPKKLALL_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.2017089724541	3	328.226827	981.658653	-0.60381	-0.00019819	-0.33716	-0.00011067	-0.94097	-0.00030885	328.22665066290404	37.437	0.28046	38.721	38.558	38.838	1.284					41	20	3	0	0	0	0.11619	1	15733	15733		7.1017	4.6032	1	12456000			32012	1495	15817	15881	37122	37122					0.1670897127612534
SLPKKLALL	9	Unmodified	_SLPKKLALL_					0	0	0		ENSG00000104979|ENST00000588234|C19orf53;ENST00000588858.5_1_19:13886394-13889009:+|nuORF	ENSG00000104979|ENST00000588234|C19orf53	ENSG00000104979|ENST00000588234|C19orf53	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3379699587822	2	491.836603	981.658653	0.89602	0.0004407	-0.84097	-0.00041362	0.055054	2.7078E-05	491.8361136872109	36.748	0.39182	38.565	38.376	38.768	1.8176					54	27	3	0	0	0	0.1109	3	15381	15381;15421;15459		45.7	21.026	1	10054000			32013	1495	15817	15881	37123;37124;37125	37123					0.1670897127612534
SLPLLLLLLG	10	Unmodified	_SLPLLLLLLG_					0	0	0		nc|ENSG00000170476|Q8WU39-5|MZB1;nc|ENSG00000170476|Q8WU39-4|MZB1;ENST00000503120.5_1_5:138725194-138725560:-|nuORF;nc|ENSG00000170476|Q8WU39-2|MZB1;ENSG00000170476|ENST00000302125|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3608276247978	2	526.359911	1050.70527	0.89321	0.00047015	1.722	0.00090639	2.6152	0.0013765	526.3606858639121	18.286	0.68093	18.286	17.996	18.677	0					45	24	2	0	0	0	0.89803	1	7501	7501		1.4819	0	1	2183400			32014	4149	15818	15882	37126	37126					0.18194411107424457
SLPLLLLLLG	10	Unmodified	_SLPLLLLLLG_					0	0	0		nc|ENSG00000170476|Q8WU39-5|MZB1;nc|ENSG00000170476|Q8WU39-4|MZB1;ENST00000503120.5_1_5:138725194-138725560:-|nuORF;nc|ENSG00000170476|Q8WU39-2|MZB1;ENSG00000170476|ENST00000302125|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2432433962822	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	1	8011	8011		0.69767	0	1	143590000			32015	4149	15818	15882	37127	37127					0.18194411107424457
SLPLLLLLLG	10	Unmodified	_SLPLLLLLLG_					0	0	0		nc|ENSG00000170476|Q8WU39-5|MZB1;nc|ENSG00000170476|Q8WU39-4|MZB1;ENST00000503120.5_1_5:138725194-138725560:-|nuORF;nc|ENSG00000170476|Q8WU39-2|MZB1;ENSG00000170476|ENST00000302125|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	nc|ENSG00000170476|Q8WU39-5|MZB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2432739138603	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	1	7751	7751		0.77653	0	1	364430000			32016	4149	15818	15882	37128	37128					0.18194411107424457
SLPLTTYTSQV	11	Unmodified	_SLPLTTYTSQV_					0	0	0		ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3257324099541	2	605.321711	1208.62887	4.4179	0.0026742	0.84711	0.00051277	5.265	0.003187	605.3224336145886	87.332	0.4333	88.424	88.241	88.674	1.0918					34	13	3	0	0	0	0.37492	2	36833	36833;36904		27.629	2.2295	1	5353300			32017	4762	15819	15883	37129;37130	37129					0.03289942749461261
SLPLTTYTSQV	11	Unmodified	_SLPLTTYTSQV_					0	0	0		ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3257324099541	2	605.321711	1208.62887	4.9121	0.0029734	1.7517	0.0010603	6.6637	0.0040337	605.3226805324913	87.787	0.47385	88.879	88.674	89.148	1.0918					21	14	2	0	0	0	0.58697	1	37033	37033		21.537	3.3906	1	1470500			32018	4762	15819	15883	37131	37131					0.03289942749461261
SLPLTTYTSQV	11	Unmodified	_SLPLTTYTSQV_					0	0	0		ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	ENSG00000185823|ENST00000329468|NPAP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	605.321711	1208.62887	2.5052	0.0015164	1.6621	0.0010061	4.1672	0.0025225	605.3227319274914	88.588	0.57956	88.823	88.661	89.24	0.23471	-0.028014	-5.9204E-05	NaN	21.537	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320290			32019	4762	15819	15883							0.03289942749461261
SLPPGVHI	8	Unmodified	_SLPPGVHI_					0	0	0		ENST00000548269.1_1_12:53587490-53588125:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7;ENSG00000139626|ENST00000267082|ITGB7	ENST00000548269.1_1_12:53587490-53588125:-|nuORF	ENST00000548269.1_1_12:53587490-53588125:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2404968142509	2	410.239796	818.465038	2.0489	0.00084056	0.64419	0.00026427	2.6931	0.0011048	410.2401684114007	39.303	0.28928	40.599	40.443	40.732	1.2961					12	8	2	0	0	0	0.86202	1	16503	16503		15.768	0	1	655670			32020	2884	15820	15884	37132	37132					0.04854434559899801
SLPPGVHI	8	Unmodified	_SLPPGVHI_					0	0	0		ENST00000548269.1_1_12:53587490-53588125:-|nuORF;nc|ENSG00000139626|P26010-2|ITGB7;ENSG00000139626|ENST00000267082|ITGB7	ENST00000548269.1_1_12:53587490-53588125:-|nuORF	ENST00000548269.1_1_12:53587490-53588125:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	410.239796	818.465038	1.1916	0.00048885	-1.2573	-0.00051579	-0.065665	-2.6938E-05	410.2389695054814	38.756	0.28994	40.593	40.429	40.719	1.8366	-0.0032506	-0.00042158	NaN	15.768	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615890			32021	2884	15820	15884							0.04854434559899801
SLPQSSSG	8	Unmodified	_SLPQSSSG_					0	0	0			REV__ENST00000512062.5_1_16:69497047-69497263:+|nuORF	REV__ENST00000512062.5_1_16:69497047-69497263:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	762.3688842654228	1	762.362824	761.355547	2.7746	0.0021153	3.5271	0.0026889	6.3017	0.0048042	762.366263773619	100.17	0.14876	100.37	100.3	100.44	0.20527					6	4	2	0	0	0	0.84871	1	42132	42132		16.942	3.4344	1	2980900	+		32022	13578	15821	15885	37133	37133					-0.03467615850081529
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.8981811404228	3	379.89614	1136.66659	-0.40902	-0.00015538	3.0258	0.0011495	2.6167	0.00099409	380.2305638364206	72.126	0.69736	72.126	71.922	72.62	0					37	21	2	0	0	0	0.86984	2	30064	30019;30064		4.7159	1.6437	1	2779000			32023	6636	15822	15886	37134;37135	37135					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	379.8986694216728	3	379.89614	1136.66659	-0.36067	-0.00013702	1.3594	0.00051644	0.99875	0.00037942	379.8982534133087	72.81	1.3005	72.81	72.557	73.857	0					63	41	2	0	0	0	0.88508	1	30317	30317		3.0723	0.33707	1	2188700			32024	6636	15822	15886	37136	37136					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.8978454470634	3	379.89614	1136.66659	1.4944	0.00056774	-0.12371	-4.6995E-05	1.3707	0.00052074	379.8976826829215	71.299	1.4837	71.622	70.679	72.163	0.32359					67	46	2	0	0	0	0.8754	2	29867	29813;29867		4.1166	2.5243	1	2100000			32025	6636	15822	15886	37137;37138	37138					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2304260134697	3	379.89614	1136.66659	1.8108	0.00068793	-0.38826	-0.0001475	1.4226	0.00054043	380.2286271516054	72.013	1.0479	72.338	72.164	73.212	0.32494					53	32	2	0	0	0	0.86984	1	30142	30142		4.7159	1.1289	1	2262700			32026	6636	15822	15886	37139	37139					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	379.8982116580009	3	379.89614	1136.66659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.956	1	71.31	70.81	71.81	1.3536								0	0	0	0.66108	1	29362	29362		2.6312	0.34846	1				32027	6636	15822	15886	37140	37140					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.8984252810478	3	379.89614	1136.66659	1.8223	0.00069228	-0.1834	-6.9671E-05	1.6389	0.00062261	379.8976631908203	69.33	1.9526	71.183	69.75	71.702	1.853					84	62	2	0	0	0	0.8754	1	29101	29101		4.1166	2.3744	1	1642600			32028	6636	15822	15886	37141	37141					0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	379.89614	1136.66659	2.0882	0.0007933	0.17116	6.5023E-05	2.2594	0.00085832	379.89752020385015	70.729	1.0005	72.083	71.552	72.553	1.3536	-0.086333	-0.00062171	NaN	4.7159	51	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2049400			32029	6636	15822	15886							0.10372498525589435
SLPRISSLHK	10	Unmodified	_SLPRISSLHK_					0	0	0		ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	ENST00000454037.1_1_4:758749-758851:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	379.89614	1136.66659	1.8925	0.00071895	-0.75222	-0.00028577	1.1403	0.00043318	380.22864652313694	70.291	0.84525	72.129	71.687	72.532	1.8378	-0.040008	-0.0016741	NaN	4.7159	36	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1889500			32030	6636	15822	15886							0.10372498525589435
SLPRLKPDLGR	11	Unmodified	_SLPRLKPDLGR_					0	0	0			REV__ENST00000565060.1_1_16:27280195-27280997:+|nuORF	REV__ENST00000565060.1_1_16:27280195-27280997:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6928588747978	4	313.693753	1250.7459	-2.6816	-0.00084121	-0.61662	-0.00019343	-3.2983	-0.0010346	313.6935487403373	31.121	0.66912	31.121	30.896	31.565	0					98	21	5	0	0	0	1.0351	2	13170	13119;13170		1.6479	0.43306	1	20258000	+		32031	13928	15823	15887	37142;37143	37143					0.13056145479708903
SLPRLKPDLGR	11	Unmodified	_SLPRLKPDLGR_					0	0	0			REV__ENST00000565060.1_1_16:27280195-27280997:+|nuORF	REV__ENST00000565060.1_1_16:27280195-27280997:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9214965701103	3	417.922578	1250.7459	0.77487	0.00032383	-2.2078	-0.00092269	-1.4329	-0.00059885	417.92076908504407	29.26	0.63719	30.542	30.343	30.98	1.2825					65	20	4	0	0	0	1.0351	1	12366	12366		1.6479	1.0211	1	5728000	+		32032	13928	15823	15887	37144	37144					0.13056145479708903
SLPRPLPVPY	10	Unmodified	_SLPRPLPVPY_					0	0	0		ENST00000515056.5_1_5:139941018-139941221:-|nuORF;APBB3|p.V234Afs*30|1|0.05|ENSG00000113108|chr5:140561633-140561634|-/CTTCTGAGCAGCTTGGCTTACCG|frameshift_variant	ENST00000515056.5_1_5:139941018-139941221:-|nuORF	ENST00000515056.5_1_5:139941018-139941221:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2284728884697	3	380.225486	1137.65463	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.261	1	84.899	84.399	85.399	1.6379								0	0	0	0.66141	1	34925	34925		2.086	0.34373	1				32033	70	15824	15888	37145	37145					0.09130881782402867
SLPSSTFSEAP	11	Unmodified	_SLPSSTFSEAP_					0	0	0			REV__ENSG00000182704|ENST00000333090|TSKU	REV__ENSG00000182704|ENST00000333090|TSKU	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.8154785037041	2	561.769311	1121.52407	3.5454	0.0019917	-2.8461	-0.0015988	0.69933	0.00039286	562.2704218009975	82.456	0.25564	83.669	83.602	83.858	1.2125					14	7	3	0	0	0	0.14414	1	34598	34598		8.7454	0	1	954430	+		32034	11361	15825	15889	37146	37146					-0.03183178727090308
SLPSVSFIY	9	Unmodified	_SLPSVSFIY_					0	0	0			REV__nc|ENSG00000140279|Q9NRD8|DUOX2	REV__nc|ENSG00000140279|Q9NRD8|DUOX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.537646472454	1	1012.53497	1011.5277	1.5351	0.0015544	0.27796	0.00028145	1.8131	0.0018358	1012.5352560746998	67.672	0.85576	69.05	68.789	69.645	1.3778					117	27	6	0	0	0	0.042029	3	28496	28312;28405;28496		74.423	19.859	1	234940000	+		32035	10120	15826	15890	37147;37148;37149	37149					0.022395358374296848
SLPSVSFIY	9	Unmodified	_SLPSVSFIY_					0	0	0			REV__nc|ENSG00000140279|Q9NRD8|DUOX2	REV__nc|ENSG00000140279|Q9NRD8|DUOX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.536853015423	1	1012.53497	1011.5277	1.2418	0.0012574	-0.042445	-4.2977E-05	1.1994	0.0012144	1012.5349966761479	67.145	0.86556	69.034	68.764	69.63	1.8889					100	27	5	0	0	0	0.051699	4	28143	28143;28182;28260;28299		67.344	18.998	1	238560000	+		32036	10120	15826	15890	37150;37151;37152;37153	37150					0.022395358374296848
SLPTLPSQV	9	Unmodified	_SLPTLPSQV_					0	0	0		nc|ENSG00000087589|Q9NQ75-3|CASS4;nc|ENSG00000087589|Q9NQ75-2|CASS4;ENST00000497244.1_1_20:54987478-55028248:+|nuORF;ENSG00000087589|ENST00000679887|CASS4	nc|ENSG00000087589|Q9NQ75-3|CASS4	nc|ENSG00000087589|Q9NQ75-3|CASS4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2702819705009	2	471.26875	940.522947	2.657	0.0012522	-0.38181	-0.00017994	2.2752	0.0010722	471.2685320432042	65.263	0.51015	65.59	65.323	65.833	0.32689					37	15	3	0	0	0	0.24063	2	27279	27279;27412		28.487	5.3384	1	4986200			32037	1091	15827	15891	37154;37155	37154					0.05030651694664812
SLQAGREGVLT	11	Unmodified	_SLQAGREGVLT_					0	0	0			REV__nc|ENSG00000005471|P21439-3|ABCB4;REV__ENSG00000085563|ENST00000622132|ABCB1	REV__nc|ENSG00000005471|P21439-3|ABCB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8113891482353	2	565.811845	1129.60914	2.6474	0.0014979	-3.7423	-0.0021174	-1.0949	-0.00061948	565.809744942903	63.514	0.38234	65.458	65.216	65.598	1.9444					20	11	3	0	0	0	0.77451	1	26638	26638		16.149	0.30192	1	3682400	+		32038	8499;8853	15828	15892	37156	37156					0.04951611529349975
SLQAWARGI	9	Unmodified	_SLQAWARGI_					0	0	0			REV__ENST00000518820.1_1_8:143560496-143561060:+|nuORF	REV__ENST00000518820.1_1_8:143560496-143561060:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.7662841677666	2	501.279983	1000.54541	2.9673	0.0014875	-0.68631	-0.00034403	2.281	0.0011434	501.2797619447107	62.399	0.51387	63.817	63.652	64.166	1.4177					23	16	2	0	0	0	0.097511	1	26278	26278		16.942	0	1	1002700	+		32039	13612	15829	15893	37157	37157					0.04516295882945087
SLQEKLWAI	9	Unmodified	_SLQEKLWAI_					0	0	0		ENST00000217398.3_1_20:32295514-32298573:-|nuORF;ENSG00000101417|ENST00000409299|PXMP4	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.3129150271416	2	544.310949	1086.60735	1.6748	0.00091161	0.80983	0.0004408	2.4846	0.0013524	544.3114915445882	57.786	0.44778	57.786	57.594	58.042	0					34	13	3	0	0	0	0.019071	3	24122	24074;24122;24165		100.09	34.856	1	4268100			32040	1347	15830	15894	37158;37159;37160	37159					0.06750602511419856
SLQEKLWAI	9	Unmodified	_SLQEKLWAI_					0	0	0		ENST00000217398.3_1_20:32295514-32298573:-|nuORF;ENSG00000101417|ENST00000409299|PXMP4	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3106567263603	2	544.310949	1086.60735	2.3133	0.0012591	-1.5137	-0.00082391	0.79959	0.00043523	544.3101773674182	57.254	0.39474	57.575	57.395	57.79	0.32103					31	14	3	0	0	0	0.034867	2	23981	23981;24023		80.676	18.103	1	4830900			32041	1347	15830	15894	37161;37162	37161					0.06750602511419856
SLQEKLWAI	9	Unmodified	_SLQEKLWAI_					0	0	0		ENST00000217398.3_1_20:32295514-32298573:-|nuORF;ENSG00000101417|ENST00000409299|PXMP4	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3121215701103	2	544.310949	1086.60735	0.2778	0.00015121	-0.45732	-0.00024893	-0.17952	-9.7716E-05	544.3110445939576	56.056	0.44296	57.466	57.305	57.748	1.4099					56	20	3	0	0	0	0.019071	3	23499	23452;23499;23555		100.09	25.162	1	17324000			32042	1347	15830	15894	37163;37164;37165	37164					0.06750602511419856
SLQEKLWAI	9	Unmodified	_SLQEKLWAI_					0	0	0		ENST00000217398.3_1_20:32295514-32298573:-|nuORF;ENSG00000101417|ENST00000409299|PXMP4	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	ENST00000217398.3_1_20:32295514-32298573:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3109008669853	2	544.310949	1086.60735	0.49589	0.00026992	-1.3648	-0.00074287	-0.8689	-0.00047295	544.3106165505974	55.532	0.44398	57.501	57.336	57.78	1.9684					44	21	3	0	0	0	0.0051116	2	23259	23259;23300		121.53	58.961	1	18130000			32043	1347	15830	15894	37166;37167	37166					0.06750602511419856
SLQELLAQL	9	Unmodified	_SLQELLAQL_					0	0	0			REV__NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant	REV__NLRP2|p.N562Afs*34|1|0.05|ENSG00000022556|chr19:54983380-54983381|-/GGCGGAGGTTGCAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7971374392509	2	507.795132	1013.57571	2.1652	0.0010995	0.77627	0.00039419	2.9414	0.0014936	507.79544499524906	66.684	0.31416	67.009	66.749	67.063	0.32449					24	9	3	0	0	0	0.086433	1	27848	27848		53.833	2.203	1	3134100	+		32044	8561	15831	15895	37168	37168					0.06946609757460465
SLQELLIQV	9	Unmodified	_SLQELLIQV_					0	0	0		ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	ENSG00000126773|ENST00000406854|PCNX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.8113891482353	2	521.810782	1041.60701	2.8983	0.0015124	0.47263	0.00024663	3.371	0.001759	521.8108496118623	78.86	0.34505	80.126	79.939	80.284	1.2668					15	10	2	0	0	0	0.063746	1	33093	33093		62.573	2.4988	1	2075000			32045	2315	15832	15896	37169	37169					0.0878718279154782
SLQEWIALK	9	Unmodified	_SLQEWIALK_					0	0	0			REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3128539919853	2	544.310949	1086.60735	2.4806	0.0013502	0.92915	0.00050574	3.4097	0.001856	544.3112047098207	84.302	0.38164	84.563	84.28	84.662	0.26083					17	11	2	0	0	0	0.51189	1	35237	35237		14.838	2.3067	1	749130	+		32046	8747	15833	15897	37170	37170					0.06750602511397119
SLQEWIALK	9	Unmodified	_SLQEWIALK_					0	0	0			REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3131591677666	2	544.310949	1086.60735	1.9703	0.0010724	1.4782	0.00080459	3.4485	0.001877	544.3115248216285	83.453	0.44158	84.641	84.326	84.767	1.1879					30	13	3	0	0	0	0.39927	1	34963	34963		20.454	5.2051	1	5236800	+		32047	8747	15833	15897	37171	37171					0.06750602511397119
SLQEWIALK	9	Unmodified	_SLQEWIALK_					0	0	0			REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	REV__nc|ENSG00000073737|Q9BPW9-2|DHRS9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3141357302666	2	544.310949	1086.60735	2.3892	0.0013004	-1.4169	-0.00077126	0.97222	0.00052919	544.3100329703734	82.92	0.52513	84.59	84.265	84.79	1.67					26	16	2	0	0	0	0.39927	1	34758	34758		20.454	6.5476	1	5287200	+		32048	8747	15833	15897	37172	37172					0.06750602511397119
SLQFIPILI	9	Unmodified	_SLQFIPILI_					0	0	0		ENSG00000260286|ENST00000565469|ARMH2	ENSG00000260286|ENST00000565469|ARMH2	ENSG00000260286|ENST00000565469|ARMH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3322021365166	2	522.328611	1042.64267	5.1063	0.0026672	0.2819	0.00014725	5.3882	0.0028144	522.328718469515	87.832	0.50565	88.924	88.674	89.18	1.0918					44	15	4	0	0	0	0.044893	2	36993	36993;37094		71.922	7.8527	1	7756400			32049	5418	15834	15898	37173;37174	37173					0.12305265039231017
SLQFIPILI	9	Unmodified	_SLQFIPILI_					0	0	0		ENSG00000260286|ENST00000565469|ARMH2	ENSG00000260286|ENST00000565469|ARMH2	ENSG00000260286|ENST00000565469|ARMH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3312255740166	2	522.328611	1042.64267	4.613	0.0024095	0.23406	0.00012226	4.847	0.0025317	522.3286740673203	87.346	0.46768	88.841	88.642	89.11	1.4953					42	14	4	0	0	0	0.026836	2	36841	36841;36884		92.491	14.507	1	7583900			32050	5418	15834	15898	37175;37176	37175					0.12305265039231017
SLQGFFIFL	9	Unmodified	_SLQGFFIFL_					0	0	0		PKN1-EMR3|1|fusion;DDX39A-EMR3|1|fusion;nc|ENSG00000131355|Q9BY15-2|ADGRE3;ENSG00000131355|ENST00000253673|ADGRE3	PKN1-EMR3|1|fusion	PKN1-EMR3|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1643554568291	2	536.29731	1070.58007	1.7212	0.00092308	-0.18885	-0.00010128	1.5324	0.0008218	536.2970814968884	46.109	0.44109	47.484	47.24	47.681	1.3751					28	13	3	0	0	0	0.11645	1	19277	19277		2.0598	0	1	1922800			32051	399	15835	15899	37177	37177					0.04760118971034899
SLQIIYEKV	9	Unmodified	_SLQIIYEKV_					0	0	0			REV__ENSG00000185215|ENST00000560869|TNFAIP2	REV__ENSG00000185215|ENST00000560869|TNFAIP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8200561404228	2	546.818607	1091.62266	3.1006	0.0016955	0.44417	0.00024288	3.5448	0.0019384	546.8187786967859	74.522	0.79125	75.84	75.31	76.101	1.318					67	25	4	0	0	0	0.32838	1	31244	31244		24.021	1.2843	1	12766000	+		32052	8257	15836	15900	37178	37178					0.08051469308588821
SLQMAKLHV	9	Unmodified	_SLQMAKLHV_					0	0	0			REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	REV__nc|ENSG00000175221|Q9Y2X0-2|MED16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8629333376884	3	342.863672	1025.56919	0.27278	9.3525E-05	-2.2351	-0.00076634	-1.9624	-0.00067282	342.8628375502417	28.487	0.51095	30.262	30.092	30.603	1.7754					49	16	4	0	0	0	0.77876	1	12016	12016		4.1895	0	1	6115100	+		32053	11148	15837	15901	37179	37179					0.05742393325090234
SLQPHDCTL	9	Unmodified	_SLQPHDCTL_					0	0	0			REV__ENSG00000104826|ENST00000649238|LHB	REV__ENSG00000104826|ENST00000649238|LHB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.2410461306572	2	507.239667	1012.46478	1.9741	0.0010013	0.85279	0.00043257	2.8269	0.0014339	507.2399274901069	73.326	0.31213	73.326	73.121	73.433	0					20	9	3	0	0	0	0.5697	1	30525	30525		12.532	0	1	1638200	+		32054	9149	15838	15902	37180	37180					-0.04095353222260201
SLQQSQALPA	10	Unmodified	_SLQQSQALPA_					0	0	0			REV__ENSG00000196428|ENST00000688009|TSC22D2	REV__ENSG00000196428|ENST00000688009|TSC22D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7824584841728	2	521.780013	1041.54547	3.3953	0.0017716	0.94996	0.00049567	4.3453	0.0022673	521.780506879469	74.581	0.54096	75.887	75.549	76.09	1.3063					44	17	3	0	0	0	0.25725	1	31254	31254		41.956	0	1	14681000	+		32055	11634	15839	15903	37181	37181					0.026362510922808724
SLQQSQALPA	10	Unmodified	_SLQQSQALPA_					0	0	0			REV__ENSG00000196428|ENST00000688009|TSC22D2	REV__ENSG00000196428|ENST00000688009|TSC22D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.7817870974541	2	521.780013	1041.54547	2.9555	0.0015421	1.6381	0.00085474	4.5937	0.0023969	521.7808087779347	74.089	0.54574	75.885	75.536	76.082	1.7962					43	17	3	0	0	0	0.25725	1	31057	31057		41.956	7.5538	1	12157000	+		32056	11634	15839	15903	37182	37182					0.026362510922808724
SLQRINRG	8	Unmodified	_SLQRINRG_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2766296267509	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.214	1	53.537	53.037	54.037	0.32283								0	0	0	1.0178	1	22292	22292		4.756	0	1		+		32057	9803	15840	15904	37183	37183					0.062345275974166725
SLQRINRG	8	Unmodified	_SLQRINRG_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2763549685478	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.959	1	67.284	66.784	67.784	0.32449								0	0	0	1.0178	1	28028	28028		2.3027	0	1		+		32058	9803	15840	15904	37184	37184					0.062345275974166725
SLQSAYRGW	9	Unmodified	_SLQSAYRGW_					0	0	0		ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	534.2686645388603	2	534.267073	1066.51959	2.4797	0.0013248	1.2421	0.0006636	3.7218	0.0019884	534.2670652192655	85.274	0.31738	85.274	85.1	85.417	0					30	9	5	0	0	0	0.77526	1	35523	35523		4.3292	0	1	3038500			32059	803	15841	15905	37185	37185					-0.01100598359334981
SLQSLIISV	9	Unmodified	_SLQSLIISV_					0	0	0		ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.2928649783134	2	480.292225	958.569897	2.7754	0.001333	-0.83321	-0.00040018	1.9422	0.00093281	480.29192538867665	77.514	0.34354	77.83	77.637	77.981	0.31653					16	10	2	0	0	0	0.11643	2	32403	32403;32456		43.858	7.7313	1	1423400			32060	3630	15842	15906	37186;37187	37186					0.08895511245827947
SLQSLIISV	9	Unmodified	_SLQSLIISV_					0	0	0		ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	ENSG00000162607|ENST00000339950|USP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2947265505791	2	480.292225	958.569897	2.6682	0.0012815	1.1915	0.00057228	3.8597	0.0018538	480.29315795657567	75.98	0.33947	77.747	77.537	77.877	1.7672					24	10	3	0	0	0	0.044893	2	31892	31844;31892		71.922	3.8939	1	2650400			32061	3630	15842	15906	37188;37189	37189					0.08895511245827947
SLQSTILGV	9	Unmodified	_SLQSTILGV_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	917.5311157107353	1	917.530224	916.522947	2.1231	0.001948	-0.15293	-0.00014032	1.9702	0.0018077	917.5299301352869	61.263	0.37526	61.593	61.391	61.766	0.32974					27	11	3	0	0	0	0.044893	1	25687	25687		71.922	3.8416	1	5831600			32062	1404	15843	15907	37190	37190					0.06134651694674176
SLQSTILGV	9	Unmodified	_SLQSTILGV_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	459.2694885134697	2	459.26875	916.522947	2.8463	0.0013072	-0.19195	-8.8158E-05	2.6544	0.0012191	459.2686343388159	60.133	0.57272	61.553	61.298	61.871	1.4196					53	18	4	0	0	0	0.073578	1	25183	25183		58.679	1.2075	1	42802000			32063	1404	15843	15907	37191	37191					0.06134651694674176
SLQSTILGV	9	Unmodified	_SLQSTILGV_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	917.5321533083916	1	917.530224	916.522947	2.4934	0.0022878	0.044905	4.1202E-05	2.5383	0.002329	917.5299663013645	60.101	0.42109	61.52	61.358	61.779	1.4196					35	13	3	0	0	0	0.040497	1	25198	25198		75.761	4.6272	1	14580000			32064	1404	15843	15907	37192	37192					0.06134651694674176
SLQSTILGV	9	Unmodified	_SLQSTILGV_					0	0	0		ENSG00000102910|ENST00000285737|LONP2;nc|ENSG00000102910|Q86WA8-2|LONP2	ENSG00000102910|ENST00000285737|LONP2	ENSG00000102910|ENST00000285737|LONP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	917.5323974490166	1	917.530224	916.522947	2.8356	0.0026018	0.23144	0.00021236	3.0671	0.0028141	917.5303730902502	59.657	0.48265	61.626	61.405	61.887	1.969					33	15	3	0	0	0	0.040497	1	25064	25064		75.761	4.6272	1	16561000			32065	1404	15843	15907	37193	37193					0.06134651694674176
SLQSYNCQV	9	Unmodified	_SLQSYNCQV_					0	0	0			REV__tr|A0A553SS06|A0A553SS06_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_02195PE=4SV=1	REV__tr|A0A553SS06|A0A553SS06_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_02195PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.7824584841728	2	521.237124	1040.45969	3.5025	0.0018256	-2.1224	-0.0011063	1.3801	0.00071935	521.2354853645871	74.319	0.42352	75.637	75.374	75.797	1.318					37	13	4	0	0	0	0.10844	1	31254	31254		11.64	0.81637	1	1328100	+		32066	15185	15844	15908	37194	37194					-0.058916570848850824
SLQSYNCQV	9	Unmodified	_SLQSYNCQV_					0	0	0			REV__tr|A0A553SS06|A0A553SS06_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_02195PE=4SV=1	REV__tr|A0A553SS06|A0A553SS06_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_02195PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	521.237124	1040.45969	2.9166	0.0015202	-2.8167	-0.0014682	0.099887	5.2065E-05	521.23586500037	73.871	0.46144	75.667	75.317	75.778	1.7962	-0.039388	-0.00011831	NaN	11.64	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785530	+		32067	15185	15844	15908							-0.058916570848850824
SLREIRNMV	9	Unmodified	_SLREIRNMV_					0	0	0		DNAJB1-MED26|1|fusion	DNAJB1-MED26|1|fusion	DNAJB1-MED26|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	559.3102905154228	2	559.310958	1116.60736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.52	1	59.52	59.02	60.02	0								0	0	0	0.40188	1	24818	24818		8.5933	1.304	1				32068	418	15845	15909	37195	37195					0.05372279239782074
SLRFAELSV	9	Unmodified	_SLRFAELSV_					0	0	0			REV__nc|ENSG00000290320|P0DW85|H2BN1	REV__nc|ENSG00000290320|P0DW85|H2BN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	511.2868530154228	2	511.287474	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.378	1	53.378	52.878	53.878	0								0	0	0	0.13855	1	22258	22258		30.637	0	1		+		32069	14569	15846	15910	37196	37196					0.05093742960286818
SLRKLFMG	8	Unmodified	_SLRKLFMG_					0	0	0			REV__EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	REV__EMC1|p.S824Pfs*40|1|0.04|ENSG00000127463|chr1:19222742-19222743|-/GA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1992675662041	2	476.275855	950.537157	2.6935	0.0012828	1.5935	0.00075895	4.287	0.0020418	476.27609053039646	64.665	0.1835	64.992	64.916	65.099	0.32689					8	5	2	0	0	0	2.3239	1	27075	27075		2.5775	0	1	545600	+		32070	8473	15847	15911	37197	37197					0.05991025641969827
SLRKRLRVLV	10	Unmodified	_SLRKRLRVLV_					0	0	0			REV__ENSG00000187860|ENST00000338306|CCDC157	REV__ENSG00000187860|ENST00000338306|CCDC157	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4233886599541	2	620.422231	1238.82991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.859	1	83.859	83.359	84.359	0								0	0	0	0.6624	1	34944	34944		0.40072	0	1		+		32071	11555	15848	15912	37198	37198					0.22004721367306956
SLRKRLRVLV	10	Unmodified	_SLRKRLRVLV_					0	0	0			REV__ENSG00000187860|ENST00000338306|CCDC157	REV__ENSG00000187860|ENST00000338306|CCDC157	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4228393435478	2	620.422231	1238.82991	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.683	1	82.954	82.454	83.454	0.27096								0	0	0	0.6624	1	34576	34576		0.40072	0	1		+		32072	11555	15848	15912	37199	37199					0.22004721367306956
SLRKTRPLV	9	Unmodified	_SLRKTRPLV_					0	0	0		ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	357.2317993044853	3	357.232864	1068.67676	0.89964	0.00032138	-2.4533	-0.00087639	-1.5536	-0.000555	357.23200691533555	31.162	0.60461	31.453	31.211	31.816	0.29086					42	19	3	0	0	0	0.847	1	13074	13074		0.96228	0	1	732160			32073	3329	15849	15913	37200	37200					0.14517106250809775
SLRKTRPLV	9	Unmodified	_SLRKTRPLV_					0	0	0		ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	357.232864	1068.67676	-1.421	-0.00050764	-0.77273	-0.00027605	-2.1938	-0.00078369	357.23250672736094	31.421	0.24529	31.421	31.32	31.565	0	0.073812	0.002516	NaN	0.96228	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427340			32074	3329	15849	15913							0.14517106250809775
SLRKTRPLV	9	Unmodified	_SLRKTRPLV_					0	0	0		ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	357.232864	1068.67676	0.38603	0.0001379	-4.3045	-0.0015377	-3.9185	-0.0013998	357.2316735682409	29.368	0.36652	31.167	31.02	31.386	1.7987	-0.17965	-0.001269	NaN	0.96228	32	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2918500			32075	3329	15849	15913							0.14517106250809775
SLRLRRVH	8	Unmodified	_SLRLRRVH_					0	0	0		ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	ENSG00000116176|ENST00000234798|TPSG1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2207214236259	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.056	1	76.377	75.877	76.877	0.32163								0	0	0	1.0178	1	31807	31807		1.6526	0	1				32076	1956	15850	15914	37201	37201					0.12498488513688244
SLRLYKKKKKI	11	Unmodified	_SLRLYKKKKKI_					0	0	0			REV__ENST00000376510.7_1_10:23409918-23410092:+|nuORF	REV__ENST00000376510.7_1_10:23409918-23410092:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9728271365166	2	702.974296	1403.93404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.867	1	18.867	18.367	19.367	0								0	0	0	0.63775	1	7841	7841		0.30703	0.30703	1		+		32077	12722	15851	15915	37202	37202					0.24823003404139854
SLRLYKKKKKI	11	Unmodified	_SLRLYKKKKKI_					0	0	0			REV__ENST00000376510.7_1_10:23409918-23410092:+|nuORF	REV__ENST00000376510.7_1_10:23409918-23410092:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9734374880791	2	702.974296	1403.93404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.644	1	53.644	53.144	54.144	0								0	0	0	0.63775	1	22367	22367		0.35063	0.043601	1		+		32078	12722	15851	15915	37203	37203					0.24823003404139854
SLRNHQGL	8	Unmodified	_SLRNHQGL_					0	0	0			REV__nc|ENSG00000138639|Q8N264-3|ARHGAP24	REV__nc|ENSG00000138639|Q8N264-3|ARHGAP24	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1460754275322	2	462.754133	923.493713	2.9156	0.0013492	-1.247	-0.00057704	1.6686	0.00077216	462.75362625092646	79.659	0.34045	80.91	80.769	81.109	1.2512					19	10	2	0	0	0	2.3239	1	33452	33452		2.5775	0	1	962480	+		32079	8137	15852	15916	37204	37204					0.028905521890351338
SLRPLERT	8	Unmodified	_SLRPLERT_					0	0	0		ENST00000434573.1_1_11:67957574-67980138:-|nuORF	ENST00000434573.1_1_11:67957574-67980138:-|nuORF	ENST00000434573.1_1_11:67957574-67980138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2874938845634	2	486.285266	970.555979	4.6419	0.0022573	-0.12949	-6.2969E-05	4.5124	0.0021943	486.28505448808426	88.301	0.41308	89.747	89.54	89.953	1.4467					20	12	2	0	0	0	0.89051	1	37221	37221		2.3027	0	1	2254900			32080	6520	15853	15917	37205	37205					0.0695227853735787
SLRQGLNR	8	Unmodified	_SLRQGLNR_					0	0	0			REV__ENSG00000153060|ENST00000283025|TEKT5	REV__ENSG00000153060|ENST00000283025|TEKT5	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2759582400322	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.522	1	66.921	66.421	67.421	1.3989								0	0	0	1.0178	1	27479	27479		2.0598	0	1		+		32081	10440	15854	15918	37206	37206					0.06234527597428041
SLRQHELR	8	Unmodified	_SLRQHELR_					0	0	0			REV__nc|ENSG00000161973|Q96M95-2|CCDC42	REV__nc|ENSG00000161973|Q96M95-2|CCDC42	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1412231326103	2	519.793789	1037.57303	2.498	0.0012984	1.5131	0.00078652	4.0111	0.002085	519.7944987065712	90.371	0.18234	90.371	90.288	90.47	0					6	5	2	0	0	0	2.3239	1	37737	37737		4.756	0	1	398580	+		32082	10628	15855	15919	37207	37207					0.0557419914316597
SLRQHELR	8	Unmodified	_SLRQHELR_					0	0	0			REV__nc|ENSG00000161973|Q96M95-2|CCDC42	REV__nc|ENSG00000161973|Q96M95-2|CCDC42	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	519.793789	1037.57303	5.8194	0.0030249	0.94748	0.00049249	6.7669	0.0035174	519.7942881374003	89.027	0.28822	90.083	89.951	90.239	1.0562	-0.065497	-0.00058174	NaN	4.756	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	709810	+		32083	10628	15855	15919							0.0557419914316597
SLRQHELR	8	Unmodified	_SLRQHELR_					0	0	0			REV__nc|ENSG00000161973|Q96M95-2|CCDC42	REV__nc|ENSG00000161973|Q96M95-2|CCDC42	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.793789	1037.57303	4.7298	0.0024585	3.1412	0.0016328	7.8709	0.0040913	519.7949427551938	88.546	0.22473	89.993	89.889	90.113	1.4467	-0.15613	0.0016988	NaN	4.756	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740260	+		32084	10628	15855	15919							0.0557419914316597
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4835693240166	4	359.48366	1433.90553	-1.4661	-0.00052705	0.70686	0.00025411	-0.75927	-0.00027294	359.4837822059677	28.892	0.82907	28.892	28.287	29.116	0					91	26	6	0	0	0	1.039	1	12118	12118		0.45452	0.35968	1	19242000			32085	7203	15856	15920	37208	37208					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4832946658134	4	359.48366	1433.90553	-1.3554	-0.00048724	0.4002	0.00014387	-0.9552	-0.00034338	359.4837626090117	31.334	2.3411	31.334	30.039	32.38	0					164	75	4	0	0	0	1.0391	3	13157	13020;13157;13248		0.40827	0.27183	1	27624000			32086	7203	15856	15920	37209;37210;37211	37210					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4833862185478	4	359.48366	1433.90553	-1.2357	-0.0004442	0.51284	0.00018436	-0.72282	-0.00025984	359.4832635198668	34.499	1.0096	34.499	34.008	35.018	0					50	32	2	0	0	0	1.0393	1	14626	14626		0.36667	0.28332	1	1107700			32087	7203	15856	15920	37212	37212					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4846374392509	4	359.48366	1433.90553	0.96497	0.00034689	-1.617	-0.00058127	-0.65198	-0.00023438	359.4830407973349	31.97	1.4144	32.261	31.66	33.074	0.29086					108	45	3	0	0	0	1.0393	2	13260	13260;13529		0.36667	0.27183	1	1701600			32088	7203	15856	15920	37213;37214	37213					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.7331115603447	4	359.48366	1433.90553	1.0415	0.00037439	-0.30496	-0.00010963	0.73651	0.00026476	359.48373705509897	33.422	1.157	33.719	33.23	34.387	0.29701					74	38	3	0	0	0	1.0393	1	14167	14167		0.36667	0.27183	1	1193900			32089	7203	15856	15920	37215	37215					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4826843142509	4	359.48366	1433.90553	-0.0088838	-3.1936E-06	-1.5329	-0.00055104	-1.5418	-0.00055424	359.4829911547571	26.427	1.0213	27.698	27.153	28.174	1.2715					132	32	5	0	0	0	1.0369	1	10942	10942		1.1098	0.70149	1	23682000			32090	7203	15856	15920	37216	37216					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4829894900322	4	359.48366	1433.90553	-0.066736	-2.399E-05	-3.1575	-0.0011351	-3.2242	-0.0011591	359.48226636142175	27.051	1.1533	28.323	28.115	29.268	1.2715					101	37	4	0	0	0	1.0391	3	11447	11447;11501;11568		0.40827	0.31342	1	17114000			32091	7203	15856	15920	37217;37218;37219	37217					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4828063845634	4	359.48366	1433.90553	-0.24428	-8.7814E-05	-1.7993	-0.00064684	-2.0436	-0.00073465	359.48291863379364	28.8	2.1919	30.082	29.125	31.317	1.2825					177	71	5	0	0	0	1.0391	5	12054	11801;11855;11900;12054;12360		0.40827	0.28332	1	23719000			32092	7203	15856	15920	37220;37221;37222;37223;37224	37223					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.7330505251884	4	359.48366	1433.90553	-0.41079	-0.00014767	-0.06628	-2.3826E-05	-0.47707	-0.0001715	359.4834435023772	30.453	1.3602	31.736	30.887	32.247	1.2825					81	43	3	0	0	0	1.0372	2	12895	12710;12895		1.0136	0.91873	1	1560700			32093	7203	15856	15920	37225;37226	37226					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4831420779228	4	359.48366	1433.90553	0.34538	0.00012416	-2.1741	-0.00078154	-1.8287	-0.00065738	359.48278123304226	28.148	1.2888	29.924	28.954	30.243	1.7754					160	41	5	0	0	0	1.0393	4	11583	11535;11583;11723;11877		0.36667	0.27183	1	34011000			32094	7203	15856	15920	37227;37228;37229;37230	37228					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.7337219119072	4	359.48366	1433.90553	0.41739	0.00015004	-1.4561	-0.00052344	-1.0387	-0.0003734	359.48299679152814	29.988	1.6772	31.803	30.914	32.591	1.8151					97	54	4	0	0	0	1.0391	1	12637	12637		0.40827	0.31342	1	1879600			32095	7203	15856	15920	37231	37231					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4839660525322	4	359.48366	1433.90553	0.46664	0.00016775	-1.7982	-0.00064642	-1.3315	-0.00047867	359.4830745385483	31.506	0.702	33.331	32.834	33.536	1.8246					48	24	3	0	0	0	1.0393	2	13081	13081;13123		0.36667	0.28332	1	1183300			32096	7203	15856	15920	37232;37233	37232					0.20593698547577333
SLRQILRHKRK	11	Unmodified	_SLRQILRHKRK_					0	0	0		ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	ENST00000537025.6_1_17:66040173-66040476:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.4835082888603	4	359.48366	1433.90553	0.45758	0.00016449	-1.3761	-0.0004947	-0.91855	-0.0003302	359.4831259120611	31.772	0.60264	33.596	33.49	34.092	1.8246					27	22	2	0	0	0	1.0393	1	13364	13364		0.36667	0.27183	1	1595400			32097	7203	15856	15920	37234	37234					0.20593698547577333
SLRQKLSH	8	Unmodified	_SLRQKLSH_					0	0	0		ENSG00000111536|ENST00000229134|IL26	ENSG00000111536|ENST00000229134|IL26	ENSG00000111536|ENST00000229134|IL26	MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7863342165947	2	484.785433	967.556313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.412	1	26.097	25.597	26.597	1.6845								0	0	0	1.0178	1	10197	10197		3.5965	0	1				32098	1741	15857	15921	37235	37235					0.07123698257237265
SLRRKKLKDK	10	Unmodified	_SLRRKKLKDK_					0	0	0			REV__ENSG00000189350|ENST00000379558|TOGARAM2	REV__ENSG00000189350|ENST00000379558|TOGARAM2	MSMS	GG20161007_CRH_Patient100_A02_02	2	636.4188720583916	2	636.417146	1270.81974	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.341	1	68.663	68.163	69.163	0.32224								0	0	0	0.6624	1	28608	28608		0.40072	0	1		+		32099	11610	15858	15922	37236	37236					0.19516113642066557
SLRRRRRRRRR	11	Unmodified	_SLRRRRRRRRR_					0	0	0			REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	REV__ENST00000373930.3_1_9:123476433-123476640:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	812.5244628787041	2	812.525605	1623.03666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.909	1	68.232	67.732	68.732	0.32269								0	0	0	0.63775	1	28429	28429		0	0	1				32100	12701	15859	15923	37237	37237					0.2500594675884713
SLRRRSWERRW	11	Unmodified	_SLRRRSWERRW_					0	0	0		ENST00000573267.1_3_16:74729599-74734630:-|nuORF	ENST00000573267.1_3_16:74729599-74734630:-|nuORF	ENST00000573267.1_3_16:74729599-74734630:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.9640380740166	3	529.96243	1586.86546	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.311	1	64.64	64.14	65.14	0.32899								0	0	0	0.63775	1	26941	26941		0.45452	0.35968	1				32101	7399	15860	15924	37238	37238					0.09550151877010649
SLRSDPEEE	9	Unmodified	_SLRSDPEEE_					0	0	0			REV__CMYA5|p.I1537Hfs*7|1|0.1|ENSG00000164309|chr5:79733373-79733374|-/C|frameshift_variant	REV__CMYA5|p.I1537Hfs*7|1|0.1|ENSG00000164309|chr5:79733373-79733374|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.2051879763603	2	531.240918	1060.46728	2.2698	0.0012058	-1.2829	-0.00068152	0.98691	0.00052429	531.2393612257337	64.57	0.28874	66.499	66.389	66.678	1.928					10	8	2	0	0	0	0.11463	1	27054	27054		1.8442	1.8442	1	151480	+		32102	8362	15861	15925	37239	37239					-0.06053226283620461
SLRSLNLR	8	Unmodified	_SLRSLNLR_					0	0	0		ENSG00000171823|ENST00000339235|FBXL14	ENSG00000171823|ENST00000339235|FBXL14	ENSG00000171823|ENST00000339235|FBXL14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.7940246462822	2	479.793258	957.571963	2.1107	0.0010127	-0.83365	-0.00039998	1.277	0.00061271	479.7928109753818	76.02	1.217	76.02	75.439	76.656	0					82	38	3	0	0	0	0.89051	1	31677	31677		2.3027	0	1	3896800			32103	4213	15862	15926	37240	37240					0.09147984774256201
SLRYNLTV	8	Unmodified	_SLRYNLTV_					0	0	0		nc|ENSG00000204520|Q29983-2|MICA;ENSG00000204520|ENST00000449934|MICA;nc|ENSG00000204520|Q29983|MICA	nc|ENSG00000204520|Q29983-2|MICA	nc|ENSG00000204520|Q29983-2|MICA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2781555056572	2	483.274367	964.53418	2.4863	0.0012016	2.2102	0.0010681	4.6965	0.0022697	483.2755954804475	52.365	0.28071	52.69	52.496	52.777	0.32554					15	8	2	0	0	0	0.84871	1	21887	21887		16.942	1.0951	1	700930			32104	5147	15863	15927	37241	37241					0.050494737887902374
SLSDHIVLL	9	Unmodified	_SLSDHIVLL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7912475466728	2	498.78985	995.565146	1.8206	0.00090812	0.43453	0.00021674	2.2552	0.0011249	498.79000904930115	58.931	0.5051	58.931	58.721	59.226	0					47	15	4	0	0	0	0.022807	4	24564	24519;24564;24602;24645		97.075	26.359	1	10578000			32105	496	15864	15928	37242;37243;37244;37245	37243					0.06718627103043673
SLSDHIVLL	9	Unmodified	_SLSDHIVLL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.7914611697197	2	498.78985	995.565146	3.0583	0.0015254	0.18017	8.9865E-05	3.2384	0.0016153	498.7898805496785	58.376	0.41093	58.699	58.492	58.903	0.32298					40	12	4	0	0	0	0.03795	3	24469	24424;24469;24508		77.984	13.511	1	14508000			32106	496	15864	15928	37246;37247;37248	37247					0.06718627103043673
SLSDHIVLL	9	Unmodified	_SLSDHIVLL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.7904235720634	2	498.78985	995.565146	1.1813	0.00058923	-0.34992	-0.00017454	0.8314	0.00041469	498.7897981732346	57.205	0.53759	58.619	58.338	58.875	1.4145					55	18	5	0	0	0	0.03795	4	23906	23906;23957;24008;24056		77.984	18.998	1	56518000			32107	496	15864	15928	37249;37250;37251;37252	37249					0.06718627103043673
SLSDHIVLL	9	Unmodified	_SLSDHIVLL_					0	0	0		ENSG00000005884|ENST00000320031|ITGA3;nc|ENSG00000005884|P26006-1|ITGA3;ENST00000506401.6_1_17:48148218-48152910:+|nuORF;ENST00000505306.5_1_17:48133647-48154208:+|nuORF	ENSG00000005884|ENST00000320031|ITGA3	ENSG00000005884|ENST00000320031|ITGA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.7895690798759	2	498.78985	995.565146	0.76025	0.0003792	0.38105	0.00019006	1.1413	0.00056927	498.790211888899	56.593	0.54053	58.561	58.334	58.874	1.9684					57	17	5	0	0	0	0.028763	4	23680	23680;23725;23776;23816		89.427	15.004	1	57927000			32108	496	15864	15928	37253;37254;37255;37256	37253					0.06718627103043673
SLSDRAGDAP	10	Unmodified	_SLSDRAGDAP_					0	0	0		ENST00000356056.9_1_15:72338923-72410271:-|nuORF	ENST00000356056.9_1_15:72338923-72410271:-|nuORF	ENST00000356056.9_1_15:72338923-72410271:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	988.4699584841728	1	988.469414	987.462138	4.6723	0.0046185	-3.1608	-0.0031244	1.5115	0.0014941	988.4659421275014	74.294	0.39098	75.612	75.438	75.829	1.318					34	12	3	0	0	0	0.47063	1	31192	31192		29.082	5.061	1	4918800			32109	5984	15865	15929	37257	37257					-0.03209485355580455
SLSDRAGDAP	10	Unmodified	_SLSDRAGDAP_					0	0	0		ENST00000356056.9_1_15:72338923-72410271:-|nuORF	ENST00000356056.9_1_15:72338923-72410271:-|nuORF	ENST00000356056.9_1_15:72338923-72410271:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	988.4670287966728	1	988.469414	987.462138	3.4104	0.0033711	-3.8395	-0.0037953	-0.42912	-0.00042418	988.4655586648836	73.774	0.49168	75.57	75.377	75.869	1.7962					29	15	3	0	0	0	0.35292	1	30996	30996		36.127	5.4905	1	3898900			32110	5984	15865	15929	37258	37258					-0.03209485355580455
SLSEELAKL	9	Unmodified	_SLSEELAKL_					0	0	0		ENST00000460377.1_2:149835462-149853923:+|nuORF;nc|ENSG00000168280|O60282-2|KIF5C;ENSG00000168280|ENST00000435030|KIF5C	ENST00000460377.1_2:149835462-149853923:+|nuORF	ENST00000460377.1_2:149835462-149853923:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2798339724541	2	495.279315	988.544076	1.4792	0.00073262	-1.5384	-0.00076195	-0.059219	-2.933E-05	495.27957805602625	48.923	0.34209	50.311	50.14	50.482	1.388					14	10	2	0	0	0	0.063746	1	20476	20476		62.573	12.64	1	2186300			32111	4026	15866	15930	37259	37259					0.04934617003527819
SLSEELAKL	9	Unmodified	_SLSEELAKL_					0	0	0		ENST00000460377.1_2:149835462-149853923:+|nuORF;nc|ENSG00000168280|O60282-2|KIF5C;ENSG00000168280|ENST00000435030|KIF5C	ENST00000460377.1_2:149835462-149853923:+|nuORF	ENST00000460377.1_2:149835462-149853923:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.2815734744072	2	495.279315	988.544076	2.0747	0.0010276	-2.4298	-0.0012034	-0.35511	-0.00017588	495.2797681206499	48.457	0.31017	50.434	50.266	50.576	1.9772					15	9	3	0	0	0	0.1109	1	20297	20297		45.7	11.298	1	1185000			32112	4026	15866	15930	37260	37260					0.04934617003527819
SLSEILSNI	9	Unmodified	_SLSEILSNI_					0	0	0		EPC2|p.S751Lfs*15|1|0.05|ENSG00000135999|chr2:148784899-148784900|-/GCTGGAGCCAAATATGGTAT|frameshift_variant;ENSG00000135999|ENST00000258484|EPC2	EPC2|p.S751Lfs*15|1|0.05|ENSG00000135999|chr2:148784899-148784900|-/GCTGGAGCCAAATATGGTAT|frameshift_variant	EPC2|p.S751Lfs*15|1|0.05|ENSG00000135999|chr2:148784899-148784900|-/GCTGGAGCCAAATATGGTAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2720519900322	2	488.27149	974.528426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.303	1	77.62	77.12	78.12	0.31653								0	0	0	0.16797	1	32327	32327		28.487	6.7402	1				32113	2698	15867	15931	37261	37261					0.040143304864727725
SLSEKQYFL	9	Unmodified	_SLSEKQYFL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.7946044802666	2	557.792589	1113.57063	1.7049	0.00095096	2.3649	0.0013191	4.0697	0.0022701	557.7939247893104	41.911	0.30287	42.231	42.041	42.343	0.32058					13	9	2	0	0	0	0.28372	1	17613	17613		26.268	9.3258	1	789590			32114	1573	15868	15932	37262	37262					0.01838305894852965
SLSEKQYFL	9	Unmodified	_SLSEKQYFL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7936889529228	2	557.792589	1113.57063	2.3306	0.0013	-0.60364	-0.00033671	1.727	0.0009633	557.7922224278201	40.221	0.3342	41.532	41.361	41.695	1.3102					18	10	2	0	0	0	0.16939	2	16881	16881;16932		36.506	10.238	1	1865200			32115	1573	15868	15932	37263;37264	37263					0.01838305894852965
SLSEKQYFL	9	Unmodified	_SLSEKQYFL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7939330935478	2	557.792589	1113.57063	1.7591	0.00098119	-0.19356	-0.00010797	1.5655	0.00087322	557.791916940685	39.86	0.37022	41.722	41.492	41.862	1.8624					20	11	2	0	0	0	0.18809	2	16719	16669;16719		34.402	6.7729	1	1486000			32116	1573	15868	15932	37265;37266	37266					0.01838305894852965
SLSEKQYFL	9	Unmodified	_SLSEKQYFL_					0	0	0		nc|ENSG00000106608|Q8TCY9-3|URGCP;nc|ENSG00000106608|Q8TCY9-4|URGCP;nc|ENSG00000106608|Q8TCY9-2|URGCP;ENSG00000106608|ENST00000453200|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	nc|ENSG00000106608|Q8TCY9-3|URGCP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	557.792589	1113.57063	1.2481	0.00069616	1.9475	0.0010863	3.1955	0.0017824	557.7933359912389	42.401	0.31183	42.401	42.197	42.509	0	0.084742	-0.00033477	NaN	26.268	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	476870			32117	1573	15868	15932							0.01838305894852965
SLSEKTVLL	9	Unmodified	_SLSEKTVLL_					0	0	0		ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2982360720634	2	495.297507	988.580462	1.2982	0.000643	0.66712	0.00033042	1.9653	0.00097342	495.2977577244195	39.11	0.37548	39.11	38.921	39.297	0					28	11	3	0	0	0	0.00030345	1	16387	16387		137.42	1.0904	1	6959300			32118	1057	15869	15933	37267	37267					0.08571493900228688
SLSEKTVLL	9	Unmodified	_SLSEKTVLL_					0	0	0		ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2982360720634	2	495.297507	988.580462	0.35649	0.00017657	-0.44747	-0.00022163	-0.090985	-4.5064E-05	495.297242015702	37.086	0.28141	38.37	38.242	38.523	1.284					50	23	3	0	0	0	0.0070725	1	15619	15619		114.2	2.9146	1	19479000			32119	1057	15869	15933	37268	37268					0.08571493900228688
SLSEKTVLL	9	Unmodified	_SLSEKTVLL_					0	0	0		ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	ENSG00000085063|ENST00000642928|CD59	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	495.297507	988.580462	2.2276	0.0011033	-1.0437	-0.00051696	1.1839	0.00058638	495.2969798253297	38.486	0.3383	38.795	38.633	38.971	0.30857	-0.15742	-0.00073689	NaN	137.42	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9219200			32120	1057	15869	15933							0.08571493900228688
SLSFMNPRL	9	Unmodified	_SLSFMNPRL_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENST00000480373.1_1_10:75888732-75889691:-|nuORF	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1902343630791	2	532.781502	1063.54845	1.9398	0.0010335	-2.9228	-0.0015572	-0.98301	-0.00052373	532.7795469262519	53.42	0.4217	53.42	53.225	53.647	0					33	14	3	0	0	0	0.11071	1	22206	22206		10.824	2.9138	1	4511900			32121	4724	15870	15934	37269	37269					0.019218029454577845
SLSFMNPRL	9	Unmodified	_SLSFMNPRL_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENST00000480373.1_1_10:75888732-75889691:-|nuORF	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.7805053591728	2	532.781502	1063.54845	0.81992	0.00043684	-2.8526	-0.0015198	-2.0327	-0.001083	532.7800349100697	51.479	0.53929	52.873	52.498	53.038	1.3938					44	17	4	0	0	0	0.029093	2	21549	21498;21549		88.904	38.971	1	15484000			32122	4724	15870	15934	37270;37271	37271					0.019218029454577845
SLSFMNPRL	9	Unmodified	_SLSFMNPRL_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENST00000480373.1_1_10:75888732-75889691:-|nuORF	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.7820312380791	2	532.781502	1063.54845	0.24702	0.00013161	-2.009	-0.0010703	-1.7619	-0.00093873	532.7807201716076	50.884	0.51459	52.859	52.515	53.03	1.9753					40	17	3	0	0	0	0.057024	2	21300	21251;21300		65.235	30.833	1	15265000			32123	4724	15870	15934	37272;37273	37273					0.019218029454577845
SLSFMNPRL	9	Oxidation (M)	_SLSFM(Oxidation (M))NPRL_		SLSFM(1)NPRL		SLSFM(59)NPRL	0	0	1		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant;ENST00000480373.1_1_10:75888732-75889691:-|nuORF	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7793456912041	2	540.778959	1079.54336	1.5199	0.00082191	0.52847	0.00028579	2.0483	0.0011077	540.779271012584	39.073	0.66117	40.909	40.622	41.283	1.8366					45	20	3	0	0	0	0.073578	2	16382	16382;16434		58.679	26.373	1	1477500			32124	4724	15870	15935	37274;37275	37274		81			0.006774990828262162
SLSGTRRWACR	11	Unmodified	_SLSGTRRWACR_					0	0	0			REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	646.8357421755791	2	646.835662	1291.65677	1.0327	0.000668	-2.1776	-0.0014086	-1.1449	-0.00074057	646.834499860234	24.22	0.21593	25.461	25.331	25.547	1.241					15	6	3	0	0	0	0.82375	1	10113	10113		14.405	1.5328	1	734560	+		32125	13666	15871	15936	37276	37276					0.02260987248564561
SLSGTRRWACR	11	Unmodified	_SLSGTRRWACR_					0	0	0			REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8343383669853	2	646.835662	1291.65677	0.51178	0.00033104	-3.7586	-0.0024312	-3.2468	-0.0021002	646.8333204016724	23.859	0.24356	25.543	25.387	25.631	1.6845					13	7	2	0	0	0	0.82375	1	9936	9936		14.405	1.5328	1	611640	+		32126	13666	15871	15936	37277	37277					0.02260987248564561
SLSGTRRWACR	11	Unmodified	_SLSGTRRWACR_					0	0	0			REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	REV__ENST00000526180.5_2_11:111781130-111782261:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	646.835662	1291.65677	1.0327	0.000668	-2.1776	-0.0014086	-1.1449	-0.00074057	646.834499860234	24.22	0.21593	25.461	25.331	25.547	1.241	-0.041218	0.0015501	NaN	14.405	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	734560	+		32127	13666	15871	15936							0.02260987248564561
SLSILELGL	9	Unmodified	_SLSILELGL_					0	0	0			REV__ENSG00000186306|ENST00000334438|OR10T2	REV__ENSG00000186306|ENST00000334438|OR10T2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	944.5674316287041	1	944.566275	943.558998	1.5602	0.0014737	-1.8881	-0.0017835	-0.32799	-0.00030981	944.5647416238448	68.501	0.31463	68.501	68.359	68.673	0					16	9	2	0	0	0	0.24063	1	28511	28511		28.487	0	1	629960	+		32128	11496	15872	15937	37278	37278					0.08496108871520391
SLSIMYVNGD	10	Unmodified	_SLSIMYVNGD_					0	0	0		IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant;IGF2R|p.S1819Kfs*18|1|0.12|ENSG00000197081|chr6:160078337-160078338|-/CAAGGCTCATCTGACCCCTAGGAGTT|frameshift_variant;IGF2R|p.A2191Ffs*31|1|0.04|ENSG00000197081|chr6:160090018-160090019|-/TTTTTAGTAGAGACGGGGTTTCACCATGTTG|frameshift_variant;IGF2R|p.S2210Ffs*137|1|0.18|ENSG00000197081|chr6:160090076-160090077|-/TTTGTCCCACCCGAGGTGTTCAAGCAGCCTGG|frameshift_variant;ENSG00000197081|ENST00000356956|IGF2R	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	IGF2R|p.S1818Ifs*11|1|0.13|ENSG00000197081|chr6:160078335-160078336|-/AT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2183105349541	2	549.760432	1097.50631	0.19496	0.00010718	0.27316	0.00015017	0.46812	0.00025735	549.761404618744	17.13	0.28765	18.028	17.876	18.164	0.89794					16	9	2	0	0	0	0.12556	1	7156	7156		1.4819	0.68827	1	436950			32129	4979	15873	15938	37279	37279					-0.03854217253592651
SLSLSKTKL	9	Unmodified	_SLSLSKTKL_					0	0	0			REV__ENSG00000146909|ENST00000275820|NOM1	REV__ENSG00000146909|ENST00000275820|NOM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	488.2727233767509	2	488.8055	975.596446	2.6127	0.0012771	1.5575	0.00076132	4.1702	0.0020384	488.8066579394873	76.484	0.34509	77.777	77.607	77.952	1.2938					17	10	2	0	0	0	0.10591	1	32041	32041		12.532	4.6214	1	1404800	+		32130	10317	15874	15939	37280	37280					0.10767200137115651
SLSNFIESV	9	Unmodified	_SLSNFIESV_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MSMS	GG20161007_CRH_Patient100_A02_02	2	498.2573730349541	2	498.25584	994.497126	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.03	1	68.352	67.852	68.852	0.32269								0	0	0	0.317	1	28478	28478		16.942	0	1				32131	4668	15875	15940	37281	37281					-0.0003424254761057455
SLSNFIESV	9	Unmodified	_SLSNFIESV_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2580749392509	2	498.25584	994.497126	1.7571	0.00087546	0.77691	0.0003871	2.534	0.0012626	498.25659762800507	66.906	0.40694	68.294	68.089	68.496	1.3888					26	12	3	0	0	0	0.19075	1	28051	28051		34.102	0	1	2088500			32132	4668	15875	15940	37282	37282					-0.0003424254761057455
SLSNFIESV	9	Unmodified	_SLSNFIESV_					0	0	0		ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	ENSG00000183808|ENST00000520560|RBM12B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	498.25584	994.497126	1.482	0.00073842	0.79135	0.00039429	2.2734	0.0011327	498.25688051901835	66.498	0.34674	68.387	68.15	68.497	1.8889	0.046229	1.0386E-05	NaN	34.102	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1383100			32133	4668	15875	15940							-0.0003424254761057455
SLSPLKVMV	9	Unmodified	_SLSPLKVMV_					0	0	0			REV__ENST00000437679.2_2:110663464-110663506:+|nuORF	REV__ENST00000437679.2_2:110663464-110663506:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2939025759697	2	487.291171	972.567789	1.7705	0.00086275	1.3039	0.00063536	3.0744	0.0014981	487.29186843010996	48.993	1.0586	50.97	50.761	51.819	1.9772					75	33	4	0	0	0	0.42305	1	20719	20719		19.257	4.4187	1	14034000	+		32134	13062	15876	15941	37283	37283					0.08040759236359918
SLSPNLDAQQ	10	Unmodified	_SLSPNLDAQQ_					0	0	0		ENSG00000124613|ENST00000244576|ZNF391	ENSG00000124613|ENST00000244576|ZNF391	ENSG00000124613|ENST00000244576|ZNF391	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.7666503787041	2	536.767103	1071.51965	1.8558	0.00099612	-1.5381	-0.00082562	0.31764	0.0001705	536.7657537268723	67.173	0.27908	67.496	67.34	67.619	0.32269					21	9	4	0	0	0	0.80011	1	28100	28100		12.241	1.4167	1	1581900			32135	2236	15877	15942	37284	37284					-0.013246431500192557
SLSPPINQR	9	Unmodified	_SLSPPINQR_					0	0	0		nc|ENSG00000146147|Q5VWP3-4|MLIP;ENST00000511744.1_1_6:53976250-54068425:+|nuORF;ENSG00000146147|ENST00000502396|MLIP	nc|ENSG00000146147|Q5VWP3-4|MLIP	nc|ENSG00000146147|Q5VWP3-4|MLIP	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.2845031619072	2	506.282723	1010.55089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.06	1	19.06	18.56	19.56	0								0	0	0	0.3709	1	7920	7920		11.64	0	1				32136	3137	15878	15943	37285	37285					0.04603974674762412
SLSRIQQTL	9	Unmodified	_SLSRIQQTL_					0	0	0			REV__TRIML1|p.L441Sfs*24|1|0.51|ENSG00000184108|chr4:188147284-188147284|C/-|frameshift_variant	REV__TRIML1|p.L441Sfs*24|1|0.51|ENSG00000184108|chr4:188147284-188147284|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3031494021416	2	523.303655	1044.59276	2.175	0.0011382	-2.22	-0.0011618	-0.045047	-2.3573E-05	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.5697	1	29144	29144		12.532	0	1	5777900	+		32137	11410	15879	15944	37286	37286					0.07224530363282611
SLSRLNFLL	9	Unmodified	_SLSRLNFLL_					0	0	0		ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	ENSG00000111713|ENST00000261195|GYS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	532.2767211794853	2	531.818941	1061.62333	2.5897	0.0013773	4.4313	0.0023567	7.021	0.0037339	532.3236348214615	71.794	0.2797	73.618	73.445	73.724	1.824					11	8	2	0	0	0	0.11518	1	30163	30163		7.2892	0	1	790870			32138	1752	15880	15945	37287	37287					0.09498308748334239
SLSRLYLTI	9	Unmodified	_SLSRLYLTI_					0	0	0		ENST00000261168.8_1_12:14654701-14654992:+|nuORF	ENST00000261168.8_1_12:14654701-14654992:+|nuORF	ENST00000261168.8_1_12:14654701-14654992:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.7366210818291	2	533.318774	1064.623	1.535	0.00081863	-1.3945	-0.00074369	0.14051	7.4938E-05	533.318825989548	58.678	0.1615	60.097	60.035	60.196	1.4181					6	4	2	0	0	0	0.1006	1	24636	24636		15.847	0	1	623590			32139	5618	15881	15946	37288	37288					0.09326889028443475
SLSRQRIV	8	Unmodified	_SLSRQRIV_					0	0	0			REV__nc|ENSG00000123106|Q7Z6B0-3|CCDC91	REV__nc|ENSG00000123106|Q7Z6B0-3|CCDC91	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7945129275322	2	479.793258	957.571963	3.1768	0.0015242	0.71737	0.00034419	3.8942	0.0018684	479.79308043084785	74.787	0.79829	76.093	75.756	76.555	1.3063					46	25	2	0	0	0	0.89051	1	31377	31377		2.3027	0	1	838280	+		32140	9616	15882	15947	37289	37289					0.09147984774278939
SLSSFLHGV	9	Unmodified	_SLSSFLHGV_					0	0	0		ENSG00000003393|ENST00000264276|ALS2;nc|ENSG00000003393|Q96Q42-3|ALS2;ENST00000482789.5_1_2:202606311-202633608:-|nuORF;ALS2|p.L893Rfs*19|1|0.06|ENSG00000003393|chr2:201729088-201729089|-/ATGAAAGCCCATGTAGACCTCGG|frameshift_variant;ENST00000482891.5_1_2:202587756-202633608:-|nuORF	ENSG00000003393|ENST00000264276|ALS2	ENSG00000003393|ENST00000264276|ALS2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.7522155642509	2	473.753267	945.491981	2.7605	0.0013078	-1.6642	-0.00078842	1.0963	0.00051939	473.7521317233043	54.875	0.2835	55.196	55.036	55.32	0.32088					15	9	2	0	0	0	0.5697	1	22945	22945		12.532	4.6214	1	1804900			32141	465	15883	15948	37290	37290					0.01705498380431436
SLSSFLHGV	9	Unmodified	_SLSSFLHGV_					0	0	0		ENSG00000003393|ENST00000264276|ALS2;nc|ENSG00000003393|Q96Q42-3|ALS2;ENST00000482789.5_1_2:202606311-202633608:-|nuORF;ALS2|p.L893Rfs*19|1|0.06|ENSG00000003393|chr2:201729088-201729089|-/ATGAAAGCCCATGTAGACCTCGG|frameshift_variant;ENST00000482891.5_1_2:202587756-202633608:-|nuORF	ENSG00000003393|ENST00000264276|ALS2	ENSG00000003393|ENST00000264276|ALS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.7537109255791	2	473.753267	945.491981	1.1661	0.00055246	-1.1861	-0.00056193	-0.019976	-9.4639E-06	473.7527090412162	53.509	0.27964	54.909	54.778	55.058	1.4005					20	12	2	0	0	0	0.087207	1	22388	22388		53.576	5.2297	1	6288300			32142	465	15883	15948	37291	37291					0.01705498380431436
SLSSLVRLN	9	Unmodified	_SLSSLVRLN_					0	0	0		ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	ENSG00000066557|ENST00000370952|LRRC40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7884704470634	2	494.792924	987.571294	1.5827	0.00078311	-2.8936	-0.0014317	-1.3109	-0.0006486	494.7901691261318	46.439	0.64344	48.409	47.943	48.587	1.9703					38	20	3	0	0	0	0.42305	1	19379	19379		19.257	3.4098	1	1317200			32143	808	15884	15949	37292	37292					0.07701145334556259
SLSVAIFSV	9	Unmodified	_SLSVAIFSV_					0	0	0		ENST00000539738.1_1_12:7984195-7984333:-|nuORF;ENST00000476634.1_1_12:8085578-8088630:-|nuORF;ENST00000486749.5_1_12:8083049-8088630:-|nuORF;SLC2A14|p.K321Nfs*19|1|0.06|ENSG00000173262|chr12:7821296-7821297|-/A|frameshift_variant;ENSG00000117394|ENST00000426263|SLC2A1;ENSG00000059804|ENST00000075120|SLC2A3;ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	922.5272704958916	1	922.52441	921.517133	1.7614	0.0016249	-0.28202	-0.00026017	1.4793	0.0013647	922.5242599873336	80.21	0.2515	80.21	80.102	80.354	0					11	7	2	0	0	0	0.10294	1	33408	33408		48.346	14.243	1	629370			32144	742	15885	15950	37293	37293					0.053235531830068794
SLSVAIFSV	9	Unmodified	_SLSVAIFSV_					0	0	0		ENST00000539738.1_1_12:7984195-7984333:-|nuORF;ENST00000476634.1_1_12:8085578-8088630:-|nuORF;ENST00000486749.5_1_12:8083049-8088630:-|nuORF;SLC2A14|p.K321Nfs*19|1|0.06|ENSG00000173262|chr12:7821296-7821297|-/A|frameshift_variant;ENSG00000117394|ENST00000426263|SLC2A1;ENSG00000059804|ENST00000075120|SLC2A3;ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	922.5269653201103	1	922.52441	921.517133	2.7518	0.0025386	0.37863	0.0003493	3.1304	0.0028879	922.5249624086712	78.816	0.34408	80.083	79.879	80.224	1.2668					17	10	2	0	0	0	0.059546	1	33056	33056		64.236	10.661	1	1673600			32145	742	15885	15950	37294	37294					0.053235531830068794
SLSVAIFSV	9	Unmodified	_SLSVAIFSV_					0	0	0		ENST00000539738.1_1_12:7984195-7984333:-|nuORF;ENST00000476634.1_1_12:8085578-8088630:-|nuORF;ENST00000486749.5_1_12:8083049-8088630:-|nuORF;SLC2A14|p.K321Nfs*19|1|0.06|ENSG00000173262|chr12:7821296-7821297|-/A|frameshift_variant;ENSG00000117394|ENST00000426263|SLC2A1;ENSG00000059804|ENST00000075120|SLC2A3;ENSG00000173262|ENST00000431042|SLC2A14;nc|ENSG00000173262|Q8TDB8|SLC2A14;nc|ENSG00000173262|Q8TDB8-5|SLC2A14	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	ENST00000539738.1_1_12:7984195-7984333:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	922.52441	921.517133	2.1299	0.0019649	1.0708	0.00098779	3.2007	0.0029527	922.5255716804979	78.3	0.24853	80.035	79.885	80.133	1.735	-0.07432	0.00068153	NaN	64.236	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1803500			32146	742	15885	15950							0.053235531830068794
SLSVVPPTVLR	11	Unmodified	_SLSVVPPTVLR_					0	0	0		ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3593627810478	2	584.358431	1166.70231	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.06	1	89.06	88.56	89.56	0								0	0	0	0.63775	1	37230	37230		2.9952	0	1				32147	6945	15886	15951	37295	37295					0.12562535982578993
SLSWTDWPS	9	Unmodified	_SLSWTDWPS_					0	0	0		ENST00000366760.5_2_1:227968395-227968716:+|nuORF	ENST00000366760.5_2_1:227968395-227968716:+|nuORF	ENST00000366760.5_2_1:227968395-227968716:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.7463256716728	2	539.745639	1077.47673	2.3746	0.0012817	-4.0623	-0.0021926	-1.6877	-0.00091095	539.7433423278304	88.165	0.30544	88.165	87.999	88.304	0					18	9	2	0	0	0	0.70108	1	36826	36826		7.2892	2.3922	1	1318500			32148	6050	15887	15952	37296	37296					-0.05891413207450569
SLSWTDWPS	9	Unmodified	_SLSWTDWPS_					0	0	0		ENST00000366760.5_2_1:227968395-227968716:+|nuORF	ENST00000366760.5_2_1:227968395-227968716:+|nuORF	ENST00000366760.5_2_1:227968395-227968716:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	539.745639	1077.47673	2.6281	0.0014185	-3.8901	-0.0020997	-1.262	-0.00068116	539.7434545791423	87.695	0.27608	87.93	87.793	88.069	0.23471	-0.1176	4.1603E-05	NaN	7.2892	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	906440			32149	6050	15887	15952							-0.05891413207450569
SLSWYNHF	8	Unmodified	_SLSWYNHF_					0	0	0		ENSG00000099219|ENST00000339450|ERMP1;nc|ENSG00000099219|Q7Z2K6-2|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	ENSG00000099219|ENST00000339450|ERMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2457763552666	2	527.243067	1052.47158	2.2225	0.0011718	0.85197	0.00044919	3.0745	0.001621	527.2432893115885	76.793	0.38311	78.56	78.353	78.736	1.7672					25	11	3	0	0	0	0.87431	1	32220	32220		12.532	0.89125	1	2031500			32150	1202	15888	15953	37297	37297					-0.05255672279395185
SLTIEGIIYV	10	Unmodified	_SLTIEGIIYV_					0	0	0		DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant;DHX16|p.E919Rfs*60|1|0.09|ENSG00000204560|chr6:30655243-30655244|-/G|frameshift_variant;ENSG00000204560|ENST00000376442|DHX16	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	DHX16|p.C734Sfs*37|1|0.06|ENSG00000204560|chr6:30656707-30656707|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	554.3203613162041	2	554.31844	1106.62233	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.351	1	47.31	46.81	47.81	1.9596								0	0	0	0.61972	1	19003	19003		20.454	1.1966	1				32151	406	15889	15954	37298	37298					0.07328049588772956
SLTKTKKE	8	Unmodified	_SLTKTKKE_					0	0	0		ENST00000426528.5_1_X:102160667-102160781:+|nuORF	ENST00000426528.5_1_X:102160667-102160781:+|nuORF	ENST00000426528.5_1_X:102160667-102160781:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.7829467654228	2	467.782025	933.549496	2.605	0.0012186	-0.12842	-6.0071E-05	2.4766	0.0011585	467.78225330263984	61.785	0.28365	61.785	61.645	61.929	0					21	8	3	0	0	0	0.87935	1	25781	25781		9.3474	0	1	2611600			32152	6469	15890	15955	37299	37299					0.08006340585995986
SLTKTKKE	8	Unmodified	_SLTKTKKE_					0	0	0		ENST00000426528.5_1_X:102160667-102160781:+|nuORF	ENST00000426528.5_1_X:102160667-102160781:+|nuORF	ENST00000426528.5_1_X:102160667-102160781:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7829162478447	2	467.782025	933.549496	3.1947	0.0014944	-0.66431	-0.00031075	2.5303	0.0011836	467.7817954385505	59.629	0.45298	61.598	61.405	61.858	1.969					37	14	3	0	0	0	0.87935	2	24993	24993;25093		9.3474	0	1	11338000			32153	6469	15890	15955	37300;37301	37300					0.08006340585995986
SLTLGSTKK	9	Unmodified	_SLTLGSTKK_					0	0	0		tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.7830078005791	2	467.782025	933.549496	2.7684	0.001295	-0.67162	-0.00031417	2.0968	0.00098085	467.781710306031	61.237	0.37423	61.566	61.422	61.796	0.32974					22	11	2	0	0	0	0.59203	1	25676	25676		11.64	0	1	2405500			32154	16236	15891	15956	37302	37302					0.08006340586007354
SLTLGSTKK	9	Unmodified	_SLTLGSTKK_					0	0	0		tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7835265994072	2	467.782025	933.549496	2.8264	0.0013221	-0.18963	-8.8708E-05	2.6367	0.0012334	467.7819803498284	60.132	0.42073	61.552	61.328	61.748	1.4196					36	13	3	0	0	0	0.46905	1	25222	25222		16.942	0	1	13331000			32155	16236	15891	15956	37303	37303					0.08006340586007354
SLTLGSTKK	9	Unmodified	_SLTLGSTKK_					0	0	0		tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.7835265994072	2	467.782025	933.549496	3.1947	0.0014944	-0.66431	-0.00031075	2.5303	0.0011836	467.7817954385505	59.629	0.45298	61.598	61.405	61.858	1.969					37	14	3	0	0	0	0.46905	1	25042	25042		16.942	0	1	11338000			32156	16236	15891	15956	37304	37304					0.08006340586007354
SLTLGSTKK	9	Unmodified	_SLTLGSTKK_					0	0	0		tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	tr|A0A553SJA8|A0A553SJA8_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16435PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	467.782025	933.549496	2.605	0.0012186	-0.12842	-6.0071E-05	2.4766	0.0011585	467.78225330263984	61.785	0.28365	61.785	61.645	61.929	0	0.15991	0.00026394	NaN	16.942	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2611600			32157	16236	15891	15956							0.08006340586007354
SLTLLESIV	9	Unmodified	_SLTLLESIV_					0	0	0		tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7917663455009	2	487.792058	973.569563	1.6562	0.00080788	-0.82959	-0.00040467	0.82659	0.00040321	487.7914676754391	66.751	1.2161	66.751	65.929	67.146	0					68	37	2	0	0	0	0.68551	1	27904	27904		7.9102	0	1	4742600			32158	16288	15892	15957	37305	37305					0.0817209152594387
SLTLLESIV	9	Unmodified	_SLTLLESIV_					0	0	0		tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7941467165947	2	487.792058	973.569563	3.3727	0.0016452	-0.93145	-0.00045435	2.4412	0.0011908	487.7923416726	91.193	0.26041	91.383	91.205	91.465	0.19042					13	7	2	0	0	0	0.44535	1	38209	38209		18.135	0	1	717820			32159	16288	15892	15957	37306	37306					0.0817209152594387
SLTLLESIV	9	Unmodified	_SLTLLESIV_					0	0	0		tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	tr|A0A553SKE6|A0A553SKE6_NIACIReplication-associatedrecombinationproteinAOS=NialliacirculansOX=1397GN=CEQ21_18630PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7938720583916	2	487.792058	973.569563	4.5165	0.0022031	-0.56934	-0.00027772	3.9472	0.0019254	487.79176061156966	90.331	0.38579	91.312	91.076	91.462	0.98156					26	11	3	0	0	0	0.22519	1	38097	38097		30.225	1.738	1	2045800			32160	16288	15892	15957	37307	37307					0.0817209152594387
SLTLRRVF	8	Unmodified	_SLTLRRVF_					0	0	0		ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3062927126884	2	496.306001	990.597449	1.4082	0.00069888	-0.059856	-2.9707E-05	1.3483	0.00066918	496.3061943926671	66.753	0.57286	66.753	66.512	67.085	0					31	17	3	0	0	0	0.82039	1	27795	27795		19.439	4.8573	1	2170400			32161	863	15893	15958	37308	37308					0.10177459296698999
SLTLRRVF	8	Unmodified	_SLTLRRVF_					0	0	0		ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3060485720634	2	496.306001	990.597449	2.5564	0.0012688	-2.2713	-0.0011273	0.28513	0.00014151	496.304918501009	66.334	0.9093	66.659	66.432	67.341	0.32449					45	28	3	0	0	0	0.82039	1	27846	27846		19.439	5.9311	1	1712200			32162	863	15893	15958	37309	37309					0.10177459296698999
SLTLRRVF	8	Unmodified	_SLTLRRVF_					0	0	0		ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3069335818291	2	496.306001	990.597449	2.9857	0.0014818	-2.0616	-0.0010232	0.92405	0.00045861	496.3050774301059	65.218	0.71728	66.617	66.193	66.91	1.3989					35	22	2	0	0	0	0.74212	1	27335	27335		26.341	4.5946	1	4623100			32163	863	15893	15958	37310	37310					0.10177459296698999
SLTLRRVF	8	Unmodified	_SLTLRRVF_					0	0	0		ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3062316775322	2	496.306001	990.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.743	1	66.671	66.171	67.171	1.928								0	0	0	1.0178	1	27158	27158		26.341	5.4701	1				32164	863	15893	15958	37311	37311					0.10177459296698999
SLTLRRVF	8	Unmodified	_SLTLRRVF_					0	0	0		ENSG00000070985|ENST00000696290|TRPM5;nc|ENSG00000070985|Q9NZQ8-2|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	ENSG00000070985|ENST00000696290|TRPM5	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.3063842654228	2	496.306001	990.597449	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.87	1	66.791	66.291	67.291	1.9213								0	0	0	1.0178	1	27210	27210		19.439	0	1				32165	863	15893	15958	37312	37312					0.10177459296698999
SLTLVFVETKK	11	Unmodified	_SLTLVFVETKK_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000418231.2_1_X:73350641-73351442:+|nuORF	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5887634158134	3	422.255223	1263.74384	4.0885	0.0017264	-3.1221	-0.0013183	0.9664	0.00040807	422.2538440758981	91.481	1.0254	92.463	92.039	93.064	0.98157					55	32	3	0	0	0	1.0365	1	38619	38619		1.2148	0.20126	1	1190300			32166	815	15894	15959	37313	37313					0.12251671951253229
SLTPKVYVF	9	Unmodified	_SLTPKVYVF_					0	0	0			REV__nc|ENSG00000176884|Q05586-2|GRIN1	REV__nc|ENSG00000176884|Q05586-2|GRIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.3035766482353	2	527.302593	1052.59063	2.4611	0.0012977	2.3332	0.0012303	4.7943	0.002528	527.3037696357269	83.984	0.4305	83.984	83.721	84.151	0					32	13	3	0	0	0	0.77526	1	34939	34939		4.3292	0.38484	1	8047200	+		32167	11196	15895	15960	37314	37314					0.06644101625465737
SLTRYKNIQMV	11	Unmodified	_SLTRYKNIQMV_					0	0	0		tr|A0A553SRT2|A0A553SRT2_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_01650PE=4SV=1	tr|A0A553SRT2|A0A553SRT2_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_01650PE=4SV=1	tr|A0A553SRT2|A0A553SRT2_NIACIStageIIsporulationproteinPOS=NialliacirculansOX=1397GN=CEQ21_01650PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	676.8708984255791	2	676.871379	1351.72821	2.6055	0.0017636	-2.5004	-0.0016924	0.10512	7.1155E-05	676.8696388207392	93.417	0.3549	93.585	93.355	93.71	0.16835					26	10	3	0	0	0	0.84637	2	39066	39066;39117		13.042	0.6908	1	858940			32168	16577	15896	15961	37315;37316	37315					0.06641062162566413
SLTSLSLSV	9	Unmodified	_SLTSLSLSV_					0	0	0		ENST00000467638.1_1_7:139757417-139762332:-|nuORF	ENST00000467638.1_1_7:139757417-139762332:-|nuORF	ENST00000467638.1_1_7:139757417-139762332:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.5202514529228	1	906.514239	905.506963	1.6051	0.001455	1.2688	0.0011502	2.8739	0.0026052	906.5154881839159	66.908	0.31937	66.908	66.735	67.054	0					17	9	2	0	0	0	0.19075	1	27905	27905		34.102	0	1	1275300			32169	6712	15897	15962	37317	37317					0.0504294545777384
SLTSVVLTL	9	Unmodified	_SLTSVVLTL_					0	0	0		nc|ENSG00000108406|Q8IX18-4|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;ENSG00000108406|ENST00000251241|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	932.5655395388603	1	932.566275	931.558998	1.6903	0.0015763	-0.75062	-0.0007	0.93969	0.00087632	932.5651964737281	78.509	0.22012	78.509	78.377	78.597	0					9	6	2	0	0	0	0.27148	1	32697	32697		26.884	5.137	1	443060			32170	1634	15898	15963	37318	37318					0.09048108871525073
SLTTLKKMP	9	Unmodified	_SLTTLKKMP_					0	0	0			REV__ENSG00000204021|ENST00000404190|LIPK	REV__ENSG00000204021|ENST00000404190|LIPK	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8042480349541	2	509.801903	1017.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.017	1	67.017	66.517	67.517	0								0	0	0	0.42693	1	27910	27910		3.5965	0.31518	1		+		32171	11770	15899	15964	37319	37319					0.08116144265068215
SLTVDNLSLKL	11	Unmodified	_SLTVDNLSLKL_					0	0	0			REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	601.8543578982353	2	601.853178	1201.6918	1.6434	0.00098911	0.67878	0.00040852	2.3222	0.0013976	601.8535749783845	41.58	0.40239	41.897	41.696	42.099	0.31683					39	12	4	0	0	0	0.12432	2	17509	17408;17509		51.415	7.6476	1	7376700	+		32172	11325	15900	15965	37320;37321	37321					0.09902508537516042
SLTVDNLSLKL	11	Unmodified	_SLTVDNLSLKL_					0	0	0			REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8541137576103	2	601.853178	1201.6918	2.3401	0.0014084	-0.67664	-0.00040724	1.6635	0.0010012	601.8527988203895	39.909	0.3983	41.219	40.991	41.389	1.3102					36	12	4	0	0	0	0.16578	1	16786	16786		43.982	2.1422	1	18630000	+		32173	11325	15900	15965	37322	37322					0.09902508537516042
SLTVDNLSLKL	11	Unmodified	_SLTVDNLSLKL_					0	0	0			REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	REV__FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.8539916872978	2	601.853178	1201.6918	1.658	0.00099788	0.04558	2.7432E-05	1.7036	0.0010253	601.8531838944176	39.414	0.39997	41.25	41.066	41.466	1.8366					40	12	4	0	0	0	0.23777	1	16603	16603		37.075	2.6729	1	8652600	+		32174	11325	15900	15965	37323	37323					0.09902508537516042
SLTVIVELA	9	Unmodified	_SLTVIVELA_					0	0	0			REV__RANBP6|p.K547Qfs*22|1|0.15|ENSG00000137040|chr9:6013969-6013970|-/CTATTCACAACACTTATTTG|frameshift_variant	REV__RANBP6|p.K547Qfs*22|1|0.15|ENSG00000137040|chr9:6013969-6013970|-/CTATTCACAACACTTATTTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	944.5659667849541	1	944.566275	943.558998	1.5602	0.0014737	-1.8881	-0.0017835	-0.32799	-0.00030981	944.5647416238448	68.501	0.31463	68.501	68.359	68.673	0					16	9	2	0	0	0	0.37357	1	28564	28564		21.747	1.293	1	629960	+		32175	8670	15901	15966	37324	37324					0.0849610887153176
SLTVVRVM	8	Unmodified	_SLTVVRVM_					0	0	0		ENST00000564629.1_1_16:31469686-31469839:-|nuORF	ENST00000564629.1_1_16:31469686-31469839:-|nuORF	ENST00000564629.1_1_16:31469686-31469839:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	904.4498168826103	1	904.528449	903.521173	1.4195	0.001284	0.6173	0.00055836	2.0368	0.0018424	904.5294121530924	83.577	0.82803	84.765	84.452	85.28	1.1879					39	26	2	0	0	0	2.3239	1	35203	35203		2.5775	0	1	18740000			32176	7350	15902	15967	37325	37325					0.06555319405072169
SLVAKIYRL	9	Unmodified	_SLVAKIYRL_					0	0	0		ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.9883300662041	2	531.837134	1061.65972	1.874	0.00099664	-1.6614	-0.00088361	0.21252	0.00011303	531.8352258468302	93.926	0.44031	93.926	93.709	94.149	0					29	13	3	0	0	0	0.11833	1	39335	39335		0.45834	0	1	1856300			32177	7179	15903	15968	37326	37326					0.1313518564502374
SLVAKIYRL	9	Unmodified	_SLVAKIYRL_					0	0	0		ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	531.837134	1061.65972	2.7916	0.0014847	-3.017	-0.0016046	-0.22542	-0.00011989	531.8350034229869	93.828	0.38163	93.973	93.751	94.133	0.14493	-0.011596	-0.00029753	NaN	0.45834	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1837900			32178	7179	15903	15968							0.1313518564502374
SLVAKIYRL	9	Unmodified	_SLVAKIYRL_					0	0	0		ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	531.837134	1061.65972	4.2223	0.0022456	-3.3541	-0.0017838	0.86824	0.00046176	531.8351317625444	93.143	0.42464	94.015	93.736	94.161	0.87176	0.03066	-0.00065607	NaN	0.45834	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1065700			32179	7179	15903	15968							0.1313518564502374
SLVAKIYRL	9	Unmodified	_SLVAKIYRL_					0	0	0		ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	ENST00000532859.1_1_11:43755320-43755701:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	531.837134	1061.65972	3.5061	0.0018647	-2.0872	-0.0011101	1.4188	0.00075459	531.8351644245894	92.746	0.32147	94.023	93.812	94.133	1.277	0.03857	0.00069146	NaN	0.45834	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1072600			32180	7179	15903	15968							0.1313518564502374
SLVATLQSL	9	Unmodified	_SLVATLQSL_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27;chr14:94115942-94116550|101|133.69|0.44|8.23|+|2|IFI27,None|1;nc|ENSG00000165949|P40305-4|IFI27;nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.2773010134697	2	466.276575	930.538597	1.9216	0.000896	1.64	0.00076468	3.5616	0.0016607	466.27616266820525	69.681	0.25554	69.681	69.515	69.77	0					13	7	2	0	0	0	0.42097	1	29012	29012		26.884	5.137	1	1030400			32181	7915;3871	15904	15969	37327	37327					0.07054938211717854
SLVATLQSL	9	Unmodified	_SLVATLQSL_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27;chr14:94115942-94116550|101|133.69|0.44|8.23|+|2|IFI27,None|1;nc|ENSG00000165949|P40305-4|IFI27;nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	931.5477172732353	1	931.545874	930.538597	1.7668	0.0016458	-0.47594	-0.00044336	1.2908	0.0012025	931.5464817456198	67.485	0.25066	69.355	69.238	69.489	1.87					11	7	2	0	0	0	0.046715	1	28336	28336		88.904	24.667	1	645660			32182	7915;3871	15904	15969	37328	37328					0.07054938211717854
SLVATLQSL	9	Unmodified	_SLVATLQSL_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27;chr14:94115942-94116550|101|133.69|0.44|8.23|+|2|IFI27,None|1;nc|ENSG00000165949|P40305-4|IFI27;nc|ENSG00000165949|P40305-3|IFI27;ENSG00000165949|ENST00000612813|IFI27	nc|ENSG00000165949|P40305-1|IFI27;nc|ENSG00000165949|P40305-3|IFI27	nc|ENSG00000165949|P40305-3|IFI27	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	931.545874	930.538597	2.3592	0.0021977	-0.13739	-0.00012799	2.2218	0.0020697	931.5459162561139	68.033	0.31194	69.41	69.271	69.583	1.3778	0.027589	0.00010158	NaN	88.904	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1053800			32183	7915;3871	15904	15969							0.07054938211717854
SLVAYVINSLV	11	Unmodified	_SLVAYVINSLV_					0	0	0		ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	ENSG00000173456|ENST00000311413|RNF26	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3433105349541	2	589.344989	1176.67542	2.514	0.0014816	-2.4985	-0.0014725	0.015511	9.1416E-06	589.3434624672165	77.749	1.0173	79.03	78.631	79.649	1.2809					53	32	3	0	0	0	0.92747	1	32573	32573		8.1555	0	1	2852800			32184	4283	15905	15970	37329	37329					0.09415427371413898
SLVDASWEL	9	Unmodified	_SLVDASWEL_					0	0	0		ENST00000492437.1_1_1:231474120-231475626:+|nuORF;nc|ENSG00000010072|Q9H040-3|SPRTN;nc|ENSG00000010072|Q9H040-2|SPRTN;SPRTN|p.L272Tfs*8|1|0.15|ENSG00000010072|chr1:231352701-231352702|-/A|frameshift_variant;ENSG00000010072|ENST00000295050|SPRTN	ENST00000492437.1_1_1:231474120-231475626:+|nuORF	ENST00000492437.1_1_1:231474120-231475626:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1019.504382312298	1	1019.5044	1018.49713	2.7301	0.0027833	0.25794	0.00026297	2.988	0.0030463	1019.5042123956433	69.739	0.28316	71.577	71.372	71.656	1.8378					15	8	2	0	0	0	0.059546	1	29220	29220		64.236	26.262	1	1409600			32185	545	15906	15971	37330	37330					-0.011382425476313074
SLVDGYFRL	9	Unmodified	_SLVDGYFRL_					0	0	0		ENST00000494904.1_1_1:65325735-65330472:-|nuORF;JAK1|p.N714Kfs*60|1|0.11|ENSG00000162434|chr1:64844863-64844864|-/CGAGCACC|frameshift_variant;ENSG00000162434|ENST00000342505|JAK1;ENSG00000105397|ENST00000525621|TYK2	ENST00000494904.1_1_1:65325735-65330472:-|nuORF	ENST00000494904.1_1_1:65325735-65330472:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.2891113162041	2	535.287474	1068.5604	2.5931	0.0013881	3.1779	0.0017011	5.771	0.0030892	535.2893561738144	63.978	0.32037	65.385	65.24	65.56	1.4071					24	9	3	0	0	0	0.044893	1	26830	26830		71.922	28.064	1	2948800			32186	1514	15907	15972	37331	37331					0.028857429602794582
SLVDGYFRL	9	Unmodified	_SLVDGYFRL_					0	0	0		ENST00000494904.1_1_1:65325735-65330472:-|nuORF;JAK1|p.N714Kfs*60|1|0.11|ENSG00000162434|chr1:64844863-64844864|-/CGAGCACC|frameshift_variant;ENSG00000162434|ENST00000342505|JAK1;ENSG00000105397|ENST00000525621|TYK2	ENST00000494904.1_1_1:65325735-65330472:-|nuORF	ENST00000494904.1_1_1:65325735-65330472:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.2893554568291	2	535.287474	1068.5604	2.7969	0.0014971	2.3245	0.0012443	5.1214	0.0027414	535.289097351162	63.482	0.31972	65.426	65.248	65.567	1.9444					22	9	3	0	0	0	0.1388	1	26632	26632		39.95	10.868	1	2686200			32187	1514	15907	15972	37332	37332					0.028857429602794582
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1037.553515613079	1	1037.55135	1036.54408	1.7273	0.0017921	1.0359	0.0010748	2.7632	0.0028669	1037.5516404467467	72.144	0.34715	72.144	71.953	72.3	0					23	10	3	0	0	0	0.029093	2	30063	30015;30063		88.904	20.823	1	2762500			32188	3930	15908	15973	37333;37334	37334					0.02726617003509091
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1037.554492175579	1	1037.55135	1036.54408	2.1791	0.002261	1.0134	0.0010515	3.1926	0.0033125	1037.551873491035	71.697	0.37852	72.021	71.816	72.195	0.32359					24	11	3	0	0	0	0.029093	2	30009	29963;30009		88.904	20.823	1	2533600			32189	3930	15908	15973	37335;37336	37336					0.02726617003509091
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1037.554736316204	1	1037.55135	1036.54408	2.469	0.0025618	1.4786	0.0015341	3.9476	0.0040958	1037.5526876668616	70.729	0.37994	72.083	71.873	72.253	1.3536					29	11	3	0	0	0	0.0066739	3	29635	29635;29681;29724		115.69	22.222	1	10949000			32190	3930	15908	15973	37337;37338;37339	37337					0.02726617003509091
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2811157107353	2	519.279315	1036.54408	3.2327	0.0016787	0.54989	0.00028555	3.7826	0.0019642	519.2791786448528	70.759	0.41483	72.113	71.807	72.222	1.3536					29	12	3	0	0	0	0.045797	1	29696	29696		71.134	9.7761	1	4128700			32191	3930	15908	15973	37340	37340					0.02726617003509091
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1037.553149402142	1	1037.55135	1036.54408	2.8471	0.002954	-0.041718	-4.3285E-05	2.8054	0.0029107	1037.5508887955718	70.345	0.37685	72.183	71.914	72.291	1.8378					21	11	2	0	0	0	0.0066739	3	29483	29440;29483;29523		115.69	23.201	1	6472300			32192	3930	15908	15973	37341;37342;37343	37342					0.02726617003509091
SLVDIYSQL	9	Unmodified	_SLVDIYSQL_					0	0	0		ENSG00000166888|ENST00000300134|STAT6;nc|ENSG00000166888|P42226-3|STAT6;nc|ENSG00000166888|P42226-2|STAT6	ENSG00000166888|ENST00000300134|STAT6	ENSG00000166888|ENST00000300134|STAT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2791015505791	2	519.279315	1036.54408	2.0829	0.0010816	0.21274	0.00011047	2.2956	0.0011921	519.2788435326291	70.255	0.47586	72.093	71.784	72.26	1.8378					30	14	3	0	0	0	0.066815	2	29448	29448;29500		61.357	15.337	1	4079400			32193	3930	15908	15973	37344;37345	37344					0.02726617003509091
SLVDQSYES	9	Unmodified	_SLVDQSYES_					0	0	0		ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant;ENSG00000204186|ENST00000374423|ZDBF2	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1587097048759	3	343.157466	1026.45057	1.0453	0.00035871	3.2161	0.0011036	4.2614	0.0014623	343.1582178627677	69.526	0.5229	70.892	70.701	71.224	1.3657					31	16	3	0	0	0	0.28863	1	29180	29180		26.021	5.4398	1	2648100			32194	5127	15909	15974	37346	37346					-0.0615972716957458
SLVDQSYES	9	Unmodified	_SLVDQSYES_					0	0	0		ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant;ENSG00000204186|ENST00000374423|ZDBF2	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1585571169853	3	343.157466	1026.45057	0.8221	0.00028211	2.8253	0.00096952	3.6474	0.0012516	343.15824828771235	69.054	0.43108	70.907	70.737	71.168	1.853					30	13	3	0	0	0	0.5951	1	28970	28970		11.518	1.3673	1	3090000			32195	5127	15909	15974	37347	37347					-0.0615972716957458
SLVDQSYES	9	Unmodified	_SLVDQSYES_					0	0	0		ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant;ENSG00000204186|ENST00000374423|ZDBF2	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	343.157466	1026.45057	0.87538	0.00030039	-0.43736	-0.00015008	0.43802	0.00015031	343.1565035631841	70.499	0.40133	70.822	70.647	71.048	0.32224	-0.051842	-0.0033423	NaN	26.021	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	336670			32196	5127	15909	15974							-0.0615972716957458
SLVEIILHV	9	Unmodified	_SLVEIILHV_					0	0	0		ENST00000534590.5_1_11:244044-244236:+|nuORF;ENST00000527047.5_1_11:237024-247462:+|nuORF;PSMD13|p.L315Pfs*59|1|0.26|ENSG00000185627|chr11:251842-251843|-/T|frameshift_variant;ENSG00000185627|ENST00000532097|PSMD13;nc|ENSG00000185627|Q9UNM6-2|PSMD13	ENST00000534590.5_1_11:244044-244236:+|nuORF	ENST00000534590.5_1_11:244044-244236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.8182861208916	2	511.815867	1021.61718	2.5553	0.0013078	1.9913	0.0010192	4.5466	0.002327	511.8168597020079	83.832	0.43021	83.832	83.627	84.058	0					19	13	2	0	0	0	0.087207	1	34917	34917		53.576	17.531	1	972200			32197	4753	15910	15975	37348	37348					0.10723790516817644
SLVEIILHV	9	Unmodified	_SLVEIILHV_					0	0	0		ENST00000534590.5_1_11:244044-244236:+|nuORF;ENST00000527047.5_1_11:237024-247462:+|nuORF;PSMD13|p.L315Pfs*59|1|0.26|ENSG00000185627|chr11:251842-251843|-/T|frameshift_variant;ENSG00000185627|ENST00000532097|PSMD13;nc|ENSG00000185627|Q9UNM6-2|PSMD13	ENST00000534590.5_1_11:244044-244236:+|nuORF	ENST00000534590.5_1_11:244044-244236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.8173095583916	2	511.815867	1021.61718	2.4754	0.0012669	0.49543	0.00025357	2.9708	0.0015205	511.8164020417727	83.203	0.43265	83.473	83.306	83.739	0.27029					21	13	2	0	0	0	0.11478	1	34781	34781		44.407	15.92	1	864650			32198	4753	15910	15975	37349	37349					0.10723790516817644
SLVEIILHV	9	Unmodified	_SLVEIILHV_					0	0	0		ENST00000534590.5_1_11:244044-244236:+|nuORF;ENST00000527047.5_1_11:237024-247462:+|nuORF;PSMD13|p.L315Pfs*59|1|0.26|ENSG00000185627|chr11:251842-251843|-/T|frameshift_variant;ENSG00000185627|ENST00000532097|PSMD13;nc|ENSG00000185627|Q9UNM6-2|PSMD13	ENST00000534590.5_1_11:244044-244236:+|nuORF	ENST00000534590.5_1_11:244044-244236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8178588747978	2	511.815867	1021.61718	4.1598	0.002129	-0.46211	-0.00023652	3.6977	0.0018925	511.8157385492043	82.249	0.63465	83.461	83.223	83.858	1.2125					47	19	3	0	0	0	0.03795	3	34585	34498;34544;34585		77.984	35.89	1	3430300			32199	4753	15910	15975	37350;37351;37352	37352					0.10723790516817644
SLVEIILHV	9	Unmodified	_SLVEIILHV_					0	0	0		ENST00000534590.5_1_11:244044-244236:+|nuORF;ENST00000527047.5_1_11:237024-247462:+|nuORF;PSMD13|p.L315Pfs*59|1|0.26|ENSG00000185627|chr11:251842-251843|-/T|frameshift_variant;ENSG00000185627|ENST00000532097|PSMD13;nc|ENSG00000185627|Q9UNM6-2|PSMD13	ENST00000534590.5_1_11:244044-244236:+|nuORF	ENST00000534590.5_1_11:244044-244236:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8175536990166	2	511.815867	1021.61718	4.3666	0.0022349	-1.2067	-0.00061763	3.1599	0.0016173	511.81532069325095	81.764	0.66103	83.46	83.195	83.856	1.6959					50	20	3	0	0	0	0.033521	2	34350	34297;34350		81.864	45.82	1	3218000			32200	4753	15910	15975	37353;37354	37354					0.10723790516817644
SLVEQLTMV	9	Unmodified	_SLVEQLTMV_					0	0	0		ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24;MED24|p.G459Efs*15|1|0.18|ENSG00000008838|chr17:40028859-40028860|-/T|frameshift_variant	ENSG00000008838|ENST00000394128|MED24	ENSG00000008838|ENST00000394128|MED24	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.8058654665947	2	510.275718	1018.53688	2.4473	0.0012488	-1.2612	-0.00064356	1.1861	0.00060523	510.2745095396517	68.096	0.24915	69.474	69.334	69.583	1.3778					11	7	2	0	0	0	0.11071	1	28598	28598		15.847	8.558	1	697340			32201	533	15911	15976	37355	37355					0.028355611314509588
SLVESVISL	9	Unmodified	_SLVESVISL_					0	0	0			REV__ENSG00000115593|ENST00000419482|SMYD1	REV__ENSG00000115593|ENST00000419482|SMYD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.7797119021416	2	473.776408	945.538263	4.9254	0.0023335	-1.0829	-0.00051304	3.8425	0.0018205	473.7768613302812	88.301	0.41264	89.747	89.509	89.921	1.4467					18	12	2	0	0	0	0.37357	1	37226	37226		21.747	0	1	796010	+		32202	9444	15912	15977	37356	37356					0.06331518491856514
SLVESVISL	9	Unmodified	_SLVESVISL_					0	0	0			REV__ENSG00000115593|ENST00000419482|SMYD1	REV__ENSG00000115593|ENST00000419482|SMYD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	473.776408	945.538263	6.0943	0.0028874	-1.7398	-0.00082429	4.3545	0.0020631	473.77673690878436	88.723	0.19422	89.78	89.659	89.853	1.0562	0.016086	-0.00049565	NaN	21.747	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374340	+		32203	9444	15912	15977							0.06331518491856514
SLVESVISL	9	Unmodified	_SLVESVISL_					0	0	0			REV__ENSG00000115593|ENST00000419482|SMYD1	REV__ENSG00000115593|ENST00000419482|SMYD1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	473.776408	945.538263	4.9254	0.0023335	-1.0829	-0.00051304	3.8425	0.0018205	473.7768613302812	88.301	0.41264	89.747	89.509	89.921	1.4467	-0.016086	0.00012684	NaN	21.747	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	796010	+		32204	9444	15912	15977							0.06331518491856514
SLVFFLFR	8	Unmodified	_SLVFFLFR_					0	0	0			REV__ENST00000560166.1_1_15:65447071-65448095:-|nuORF	REV__ENST00000560166.1_1_15:65447071-65448095:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5350524783134	3	343.535772	1027.58549	-2.0263	-0.0006961	-0.17579	-6.0389E-05	-2.2021	-0.00075649	343.5356602626655	26.548	0.93198	26.548	26.237	27.169	0					58	28	4	0	0	0	0.89156	1	11143	11143		1.4819	1.4819	1	3286500	+		32205	13894	15913	15978	37357	37357					0.07279842553521121
SLVGLGGTK	9	Unmodified	_SLVGLGGTK_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	416.2282897830009	2	416.25036	830.486168	-0.098418	-4.0967E-05	3.5319	0.0014702	3.4335	0.0014292	416.25193256461404	23.275	0.42669	23.275	23.139	23.566	0					21	13	3	0	0	0	0.10095	1	9689	9689		12.241	2.1667	1	1165000		+	32206	351	15914	15979	37358	37358					0.06414399868765486
SLVGLGGTK	9	Unmodified	_SLVGLGGTK_					0	0	0		ENSG00000172867|ENST00000309680|KRT2;CON__P35908v2;CON__P35908	ENSG00000172867|ENST00000309680|KRT2	ENSG00000172867|ENST00000309680|KRT2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	416.2282592654228	2	416.25036	830.486168	0.99069	0.00041238	1.9807	0.00082447	2.9714	0.0012368	416.25158160507823	23.096	0.53242	23.329	23.189	23.721	0.23306					24	16	2	0	0	0	0.11539	1	9609	9609		12.241	1.4167	1	1214200		+	32207	351	15914	15979	37359	37359					0.06414399868765486
SLVHKKDKKY	10	Unmodified	_SLVHKKDKKY_					0	0	0		nc|ENSG00000205189|Q96DT7-4|ZBTB10;nc|ENSG00000205189|Q96DT7-3|ZBTB10;nc|ENSG00000205189|Q96DT7-2|ZBTB10;ENSG00000205189|ENST00000455036|ZBTB10	nc|ENSG00000205189|Q96DT7-4|ZBTB10	nc|ENSG00000205189|Q96DT7-4|ZBTB10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	416.2274047732353	3	415.915312	1244.72411	0.44815	0.00018639	1.2451	0.00051787	1.6933	0.00070426	415.915477103556	21.917	0.31914	23.533	23.322	23.641	1.6158					21	10	3	0	0	0	0.12556	1	9094	9094		1.9064	0	1	780830			32208	5174	15915	15980	37360	37360					0.11153340731175376
SLVIVWPCLLL	11	Carbamidomethyl (C)	_SLVIVWPC(Carbamidomethyl (C))LLL_	SLVIVWPC(1)LLL		SLVIVWPC(52)LLL		0	1	0			REV__nc|ENSG00000145740|Q8TAD4-2|SLC30A5	REV__nc|ENSG00000145740|Q8TAD4-2|SLC30A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8916503787041	2	656.888509	1311.76247	2.3746	0.0015598	2.2125	0.0014533	4.587	0.0030132	656.8898839263736	75.446	0.49445	76.752	76.524	77.018	1.3063					58	15	5	0	0	0	0.11956	1	31668	31668		52.268	6.2474	1	19791000	+		32209	10285	15916	15981	37361	37361	17				0.11905510321480506
SLVKLPPP	8	Unmodified	_SLVKLPPP_					0	0	0		ENST00000594708.1_1_9:72873172-72873439:-|nuORF	ENST00000594708.1_1_9:72873172-72873439:-|nuORF	ENST00000594708.1_1_9:72873172-72873439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	425.7755309939384	2	425.773471	849.53239	1.2125	0.00051625	3.6528	0.0015553	4.8653	0.0020715	425.7753116565973	25.591	0.66942	25.843	25.645	26.314	0.25197					70	21	5	0	0	0	0.89178	1	10726	10726		0.69038	0	1	135690000			32210	7509	15917	15982	37362	37362					0.10160464770854105
SLVKQPRF	8	Unmodified	_SLVKQPRF_					0	0	0			REV__ENST00000444517.5_1_21:34958357-34959841:-|nuORF	REV__ENST00000444517.5_1_21:34958357-34959841:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	488.3205139040947	2	487.792727	973.5709	2.8233	0.0013772	-3.3713	-0.0016445	-0.54802	-0.00026732	487.7912322754054	63.71	0.7166	65.638	65.296	66.012	1.928					31	22	2	0	0	0	2.3239	1	26696	26696		12.532	0.89125	1	1172300	+		32211	13060	15918	15983	37363	37363					0.08305770405377189
SLVLDFVKL	9	Unmodified	_SLVLDFVKL_					0	0	0		nc|ENSG00000095539|Q9NTN9-3|SEMA4G;nc|ENSG00000095539|Q9NTN9|SEMA4G;ENSG00000095539|ENST00000210633|SEMA4G	nc|ENSG00000095539|Q9NTN9-3|SEMA4G	nc|ENSG00000095539|Q9NTN9-3|SEMA4G	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.9571411013603	2	517.318243	1032.62193	1.901	0.00098342	-2.9571	-0.0015298	-1.0561	-0.00054635	517.3176626776904	48.168	0.15733	48.499	48.399	48.556	0.33034					7	4	2	0	0	0	0.095205	1	20181	20181		13.906	0	1	431600			32212	1187	15919	15984	37364	37364					0.10692674659571821
SLVMRKRLRLY	11	Unmodified	_SLVMRKRLRLY_					0	0	0		nc|ENSG00000174963|Q8N9L1-4|ZIC4;nc|ENSG00000174963|Q8N9L1-2|ZIC4;ENSG00000174963|ENST00000383075|ZIC4;nc|ENSG00000174963|Q8N9L1-5|ZIC4;nc|ENSG00000174963|Q8N9L1-3|ZIC4	nc|ENSG00000174963|Q8N9L1-4|ZIC4	nc|ENSG00000174963|Q8N9L1-4|ZIC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4745361208916	4	359.473604	1433.86531	-0.84322	-0.00030312	1.9929	0.00071638	1.1496	0.00041327	359.47424480500956	75.712	0.69347	75.712	75.471	76.164	0					51	21	3	0	0	0	1.039	1	31619	31619		0.45452	0	1	2345600			32213	4348	15920	15985	37365	37365					0.16573015832818783
SLVNLGGSK	9	Unmodified	_SLVNLGGSK_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;KRT1|p.I274Rfs*5|1|0.17|ENSG00000167768|chr12:52678190-52678211|TGCATTTGTCCGCTTGTTGATT/-|frameshift_variant	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7537719607353	2	437.753267	873.491981	0.54431	0.00023827	0.94182	0.00041229	1.4861	0.00065056	437.7535701556279	24.006	0.36975	24.006	23.81	24.179	0					27	11	3	0	0	0	0.087723	2	10033	9984;10033		53.404	4.2955	1	1391600		+	32214	3993	15921	15986	37366;37367	37367					0.05017498380436791
SLVNLGGSK	9	Unmodified	_SLVNLGGSK_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;KRT1|p.I274Rfs*5|1|0.17|ENSG00000167768|chr12:52678190-52678211|TGCATTTGTCCGCTTGTTGATT/-|frameshift_variant	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.7541381716728	2	437.753267	873.491981	1.2247	0.00053613	0.60909	0.00026663	1.8338	0.00080276	437.75352669712544	23.856	0.40091	24.098	23.917	24.318	0.24252					25	12	3	0	0	0	0.087723	2	9966	9915;9966		53.404	7.3831	1	1536900		+	32215	3993	15921	15986	37368;37369	37369					0.05017498380436791
SLVNLGGSK	9	Unmodified	_SLVNLGGSK_					0	0	0		ENSG00000167768|ENST00000252244|KRT1;CON__P04264;KRT1|p.I274Rfs*5|1|0.17|ENSG00000167768|chr12:52678190-52678211|TGCATTTGTCCGCTTGTTGATT/-|frameshift_variant	ENSG00000167768|ENST00000252244|KRT1	ENSG00000167768|ENST00000252244|KRT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	437.753267	873.491981	1.4121	0.00061815	2.8613	0.0012525	4.2734	0.0018707	437.75374160612256	22.81	0.18553	24.024	23.948	24.134	1.2145	-0.018562	0.0016404	NaN	53.404	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279320		+	32216	3993	15921	15986							0.05017498380436791
SLVQRYEALD	10	Unmodified	_SLVQRYEALD_					0	0	0			REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	REV__nc|ENSG00000197535|Q9Y4I1-2|MYO5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3054687380791	2	597.311677	1192.6088	1.3705	0.00081862	-4.1736	-0.002493	-2.8031	-0.0016743	597.3096819085537	45.835	0.56062	47.805	47.503	48.064	1.9703					29	17	2	0	0	0	0.82659	1	19146	19146		9.3831	0.035688	1	740720	+		32217	11679	15922	15987	37370	37370					0.020201918095153815
SLVRLLLLV	9	Unmodified	_SLVRLLLLV_					0	0	0		ENSG00000129538|ENST00000397967|RNASE1;RNASE1|p.S50Kfs*7|1|0.04|ENSG00000129538|chr14:20801920-20801921|-/CGTT|frameshift_variant	ENSG00000129538|ENST00000397967|RNASE1	ENSG00000129538|ENST00000397967|RNASE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.3613769412041	2	513.357702	1024.70085	5.1505	0.002644	1.012	0.0005195	6.1625	0.0031635	513.3580717504743	87.725	0.5684	88.817	88.612	89.18	1.0918					34	17	3	0	0	0	0.22861	2	36965	36965;37015		29.841	3.5724	1	1909300			32218	2407	15923	15988	37371;37372	37371					0.18948946684508883
SLVRLLLLV	9	Unmodified	_SLVRLLLLV_					0	0	0		ENSG00000129538|ENST00000397967|RNASE1;RNASE1|p.S50Kfs*7|1|0.04|ENSG00000129538|chr14:20801920-20801921|-/CGTT|frameshift_variant	ENSG00000129538|ENST00000397967|RNASE1	ENSG00000129538|ENST00000397967|RNASE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.3615600466728	2	513.357702	1024.70085	5.0192	0.0025766	0.13786	7.0769E-05	5.157	0.0026474	513.357704995706	87.242	0.52759	88.737	88.487	89.015	1.4953					33	16	3	0	0	0	0.28372	2	36742	36742;36793		26.268	0	1	1286400			32219	2407	15923	15988	37373;37374	37373					0.18948946684508883
SLVRLLLLV	9	Unmodified	_SLVRLLLLV_					0	0	0		ENSG00000129538|ENST00000397967|RNASE1;RNASE1|p.S50Kfs*7|1|0.04|ENSG00000129538|chr14:20801920-20801921|-/CGTT|frameshift_variant	ENSG00000129538|ENST00000397967|RNASE1	ENSG00000129538|ENST00000397967|RNASE1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	513.357702	1024.70085	2.7625	0.0014181	0.91446	0.00046944	3.6769	0.0018876	513.3580151599191	88.698	0.29114	88.922	88.745	89.036	0.22359	0.096579	0.00028147	NaN	29.841	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	230990			32220	2407	15923	15988							0.18948946684508883
SLVRNFLC	8	Unmodified	_SLVRNFLC_					0	0	0		ENST00000343855.5_1_7:150026962-150027241:+|nuORF	ENST00000343855.5_1_7:150026962-150027241:+|nuORF	ENST00000343855.5_1_7:150026962-150027241:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	476.1992370486259	2	476.257662	950.500772	0.67039	0.00031928	0.88204	0.00042008	1.5524	0.00073935	476.25662746041525	23.212	0.092419	24.863	24.808	24.9	1.6511					4	2	2	0	0	0	2.3239	1	9685	9685		2.5775	0	1	90803			32221	5952	15924	15989	37375	37375					0.023541487452575893
SLVTTYSLL	9	Unmodified	_SLVTTYSLL_					0	0	0		ENST00000594883.1_1_19:57687110-57687311:+|nuORF	ENST00000594883.1_1_19:57687110-57687311:+|nuORF	ENST00000594883.1_1_19:57687110-57687311:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.7841369509697	2	498.784233	995.553913	2.5353	0.0012645	-1.7885	-0.00089206	0.74678	0.00037248	498.7837506141169	66.375	0.31641	66.699	66.591	66.907	0.32449					15	9	2	0	0	0	0.46905	1	27823	27823		16.942	0	1	422910			32222	7510	15925	15990	37376	37376					0.05595805008897514
SLVVQNVSV	9	Unmodified	_SLVVQNVSV_					0	0	0		ENST00000479598.5_1_2:190437559-190445261:-|nuORF;ENSG00000138449|ENST00000261024|SLC40A1	ENST00000479598.5_1_2:190437559-190445261:-|nuORF	ENST00000479598.5_1_2:190437559-190445261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	944.5491821169853	1	944.541123	943.533846	1.961	0.0018523	2.8884	0.0027282	4.8494	0.0045805	944.5446302376087	65.891	0.4604	67.8	67.616	68.076	1.9085					20	14	2	0	0	0	0.53525	1	27751	27751		13.906	0.39817	1	712450			32223	2832	15926	15991	37377	37377					0.05982054068954312
SLVVQNVSV	9	Unmodified	_SLVVQNVSV_					0	0	0		ENST00000479598.5_1_2:190437559-190445261:-|nuORF;ENSG00000138449|ENST00000261024|SLC40A1	ENST00000479598.5_1_2:190437559-190445261:-|nuORF	ENST00000479598.5_1_2:190437559-190445261:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	944.541123	943.533846	1.7298	0.0016338	4.5109	0.0042608	6.2407	0.0058946	944.5456413266285	66.194	0.88332	67.583	67.174	68.057	1.3888	-0.10841	0.0002415	NaN	13.906	49	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	932200			32224	2832	15926	15991							0.05982054068954312
SLVVRVLDV	9	Unmodified	_SLVVRVLDV_					0	0	0		ENSG00000113211|ENST00000231136|PCDHB6	ENSG00000113211|ENST00000231136|PCDHB6	ENSG00000113211|ENST00000231136|PCDHB6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3176757693291	2	500.313492	998.612431	1.4922	0.00074658	0.22163	0.00011088	1.7139	0.00085746	500.3134663813848	69.058	1.6268	69.058	68.737	70.364	0					123	51	5	0	0	0	0.25667	1	28961	28961		27.629	2.6378	1	53096000			32225	1810	15927	15992	37378	37378					0.11306906374045411
SLVWGRISV	9	Unmodified	_SLVWGRISV_					0	0	0			REV__ENST00000420757.1_1_1:240799967-240800270:-|nuORF	REV__ENST00000420757.1_1_1:240799967-240800270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7996093630791	2	508.798009	1015.58147	0.6548	0.00033316	0.77906	0.00039638	1.4339	0.00072955	508.79858731607635	56.228	0.3673	57.638	57.505	57.872	1.4099					20	12	2	0	0	0	0.093059	1	23564	23564		51.63	0.21458	1	3622500	+		32226	12975	15928	15993	37379	37379					0.07429753059795985
SLVWGRISV	9	Unmodified	_SLVWGRISV_					0	0	0			REV__ENST00000420757.1_1_1:240799967-240800270:-|nuORF	REV__ENST00000420757.1_1_1:240799967-240800270:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	508.798009	1015.58147	0.6548	0.00033316	0.77906	0.00039638	1.4339	0.00072955	508.79858731607635	56.228	0.3673	57.638	57.505	57.872	1.4099	-0.087733	-5.0252E-05	NaN	51.63	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3622500	+		32227	12975	15928	15993							0.07429753059795985
SLVWLEGHF	9	Unmodified	_SLVWLEGHF_					0	0	0			REV__ENST00000498666.5_1_21:46314678-46340855:-|nuORF	REV__ENST00000498666.5_1_21:46314678-46340855:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	544.3306152224541	2	544.282192	1086.54983	1.4254	0.00077582	2.8976	0.0015771	4.323	0.0023529	544.2835255107616	67.413	0.27148	69.283	69.09	69.362	1.87					10	8	2	0	0	0	0.10591	1	28292	28292		12.532	3.9383	1	885750	+		32228	13495	15929	15994	37380	37380					0.010017603058258828
SLWDSRML	8	Unmodified	_SLWDSRML_					0	0	0		ENST00000291572.12_1_21:45403063-45403207:+|nuORF	ENST00000291572.12_1_21:45403063-45403207:+|nuORF	ENST00000291572.12_1_21:45403063-45403207:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2535278201103	2	504.252577	1006.4906	2.2943	0.0011569	0.065014	3.2783E-05	2.3593	0.0011897	504.25231555257335	90.858	0.41071	90.858	90.651	91.062	0					41	12	5	0	0	0	0.88055	1	37979	37979		8.5933	8.5933	1	4103000			32229	5723	15930	15995	37381	37381					-0.012384589799808055
SLWFKPEEL	9	Unmodified	_SLWFKPEEL_					0	0	0		ENST00000570801.1_1_17:49245578-49248962:+|nuORF;ENSG00000243678|ENST00000512737|NME2;nc|ENSG00000243678|P22392-2|NME2	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.8055908083916	2	574.802957	1147.59136	1.9398	0.001115	-0.21029	-0.00012087	1.7295	0.00099414	574.8037592327462	62.988	0.46914	62.988	62.739	63.208	0					33	14	3	0	0	0	0.10473	3	26247	26197;26247;26304		47.749	23.075	1	2094700			32230	5355	15931	15996	37382;37383;37384	37383					0.02346896274525534
SLWFKPEEL	9	Unmodified	_SLWFKPEEL_					0	0	0		ENST00000570801.1_1_17:49245578-49248962:+|nuORF;ENSG00000243678|ENST00000512737|NME2;nc|ENSG00000243678|P22392-2|NME2	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8046752810478	2	574.802957	1147.59136	1.7729	0.0010191	1.0783	0.00061983	2.8512	0.0016389	574.8039002325983	62.409	0.46334	62.739	62.48	62.943	0.32974					33	14	3	0	0	0	0.044893	2	26154	26103;26154		71.922	41.697	1	2083300			32231	5355	15931	15996	37385;37386	37386					0.02346896274525534
SLWFKPEEL	9	Unmodified	_SLWFKPEEL_					0	0	0		ENST00000570801.1_1_17:49245578-49248962:+|nuORF;ENSG00000243678|ENST00000512737|NME2;nc|ENSG00000243678|P22392-2|NME2	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8038818240166	2	574.802957	1147.59136	3.0266	0.0017397	-0.88251	-0.00050727	2.1441	0.0012325	574.8030968577497	61.191	0.61018	62.611	62.473	63.083	1.4196					28	19	2	0	0	0	0.023685	2	25678	25631;25678		96.367	44.737	1	11745000			32232	5355	15931	15996	37387;37388	37388					0.02346896274525534
SLWFKPEEL	9	Unmodified	_SLWFKPEEL_					0	0	0		ENST00000570801.1_1_17:49245578-49248962:+|nuORF;ENSG00000243678|ENST00000512737|NME2;nc|ENSG00000243678|P22392-2|NME2	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	ENST00000570801.1_1_17:49245578-49248962:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8044311404228	2	574.802957	1147.59136	3.2654	0.001877	-0.93452	-0.00053716	2.3309	0.0013398	574.802966075517	60.653	0.67585	62.618	62.451	63.127	1.9653					38	21	4	0	0	0	0.02878	3	25455	25404;25455;25508		89.401	45.628	1	9288000			32233	5355	15931	15996	37389;37390;37391	37390					0.02346896274525534
SLWGGDVVL	9	Unmodified	_SLWGGDVVL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;VPS13B|p.S1313Ifs*22|1|0.24|ENSG00000132549|chr8:99501752-99501755|AAGT/-|frameshift_variant;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	945.5060302615166	1	945.504009	944.496732	2.5097	0.002373	-2.2868	-0.0021622	0.22291	0.00021076	945.5022040792243	75.374	0.31606	75.698	75.522	75.838	0.32463					13	9	2	0	0	0	0.051699	1	31520	31520		67.344	40.46	1	589410			32234	2540	15932	15997	37392	37392					0.022263825232016643
SLWGGDVVL	9	Unmodified	_SLWGGDVVL_					0	0	0		ENSG00000132549|ENST00000357162|VPS13B;nc|ENSG00000132549|Q7Z7G8-6|VPS13B;nc|ENSG00000132549|Q7Z7G8|VPS13B;VPS13B-CPQ|2|fusion;VPS13B-CPQ|1|fusion;nc|ENSG00000132549|Q7Z7G8-4|VPS13B;VPS13B|p.S1313Ifs*22|1|0.24|ENSG00000132549|chr8:99501752-99501755|AAGT/-|frameshift_variant;nc|ENSG00000132549|Q7Z7G8-3|VPS13B;nc|ENSG00000132549|Q7Z7G8-5|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	ENSG00000132549|ENST00000357162|VPS13B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	945.504009	944.496732	1.7835	0.0016863	-1.0861	-0.0010269	0.69735	0.00065935	945.5037989158816	75.839	0.25613	75.839	75.691	75.948	0	0.070185	0.00078161	NaN	67.344	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669990			32235	2540	15932	15997							0.022263825232016643
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	958.4585449099541	1	958.462872	957.455596	1.6492	0.0015807	-1.1584	-0.0011103	0.49081	0.00047043	958.4616452037982	40.564	0.30161	40.564	40.396	40.698	0					14	9	2	0	0	0	0.031145	1	16987	16987		85.642	23.069	1	851130			32236	322	15933	15998	37393	37393					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	958.4651367068291	1	958.462872	957.455596	1.6937	0.0016234	0.53512	0.00051289	2.2288	0.0021363	958.4637409520378	40.096	0.34541	40.408	40.257	40.602	0.31263					17	10	2	0	0	0	0.098163	2	16913	16848;16913		49.933	23.049	1	539260			32237	322	15933	15998	37394;37395	37395					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7360412478447	2	479.735074	957.455596	2.142	0.0010276	-0.84253	-0.00040419	1.2994	0.00062338	479.73430256958085	38.836	0.43836	40.133	39.974	40.413	1.2961					31	13	3	0	0	0	0.17276	1	16274	16274		36.127	16.87	1	5937600			32238	322	15933	15998	37396	37396					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.4647704958916	1	958.462872	957.455596	1.3385	0.0012829	0.68244	0.0006541	2.0209	0.001937	958.4633902631755	38.943	0.4688	40.239	39.974	40.443	1.2961					34	14	3	0	0	0	0.019486	3	16332	16282;16332;16385		99.755	52.007	1	6714600			32239	322	15933	15998	37397;37398;37399	37398					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	958.4652587771416	1	958.462872	957.455596	1.1938	0.0011442	1.5576	0.0014929	2.7514	0.0026371	958.4643125047468	38.411	0.5025	40.247	39.959	40.461	1.8366					35	15	3	0	0	0	0.0049178	3	16081	16032;16081;16122		122.18	74.431	1	3718400			32240	322	15933	15998	37400;37401;37402	37401					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7357055544853	2	479.735074	957.455596	1.0156	0.00048723	1.0472	0.00050236	2.0628	0.0009896	479.73516702775277	38.357	0.47028	40.193	39.959	40.429	1.8366					37	14	3	0	0	0	0.11643	3	16093	16042;16093;16134		43.858	11.553	1	8408000			32241	322	15933	15998	37403;37404;37405	37404					-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	479.735074	957.455596	1.9725	0.00094628	0.69625	0.00033402	2.6688	0.0012803	479.7351782321471	40.628	0.36724	40.628	40.363	40.731	0	0.28247	0.00040781	NaN	43.858	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	726860			32242	322	15933	15998							-0.024833785162968525
SLWGQPAEA	9	Unmodified	_SLWGQPAEA_					0	0	0		ENST00000477429.1_1_X:107683355-107686177:+|nuORF;ENST00000470339.1_1_X:107683355-107812096:+|nuORF;COL4A5|p.G869Efs*6|1|0.06|ENSG00000188153|chrX:108620350-108620350|C/-|frameshift_variant;nc|ENSG00000188153|P29400|COL4A5;ENSG00000188153|ENST00000328300|COL4A5	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	ENST00000477429.1_1_X:107683355-107686177:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	479.735074	957.455596	2.4823	0.0011909	0.56334	0.00027025	3.0457	0.0014611	479.73533072054295	40.115	0.37698	40.428	40.257	40.634	0.31263	0.082529	0.00028028	NaN	43.858	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	897490			32243	322	15933	15998							-0.024833785162968525
SLWGTHVVV	9	Unmodified	_SLWGTHVVV_					0	0	0		ENSG00000168288|ENST00000303319|MMADHC	ENSG00000168288|ENST00000303319|MMADHC	ENSG00000168288|ENST00000303319|MMADHC	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	499.3091308474541	2	499.276909	996.539266	1.8388	0.00091808	-2.8469	-0.0014214	-1.008	-0.00050329	499.27523500939174	50.707	0.19173	50.707	50.595	50.787	0					8	5	2	0	0	0	0.11518	1	21156	21156		11.64	4.3511	1	334510			32244	4028	15934	15999	37406	37406					0.04085777651425815
SLWHLPLLL	9	Unmodified	_SLWHLPLLL_					0	0	0		nc|ENSG00000006695|Q12887-2|COX10;ENSG00000006695|ENST00000261643|COX10	nc|ENSG00000006695|Q12887-2|COX10	nc|ENSG00000006695|Q12887-2|COX10	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3350097537041	2	546.334227	1090.6539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.007	1	94.007	93.507	94.507	0								0	0	0	0.317	1	39286	39286		16.942	5.302	1				32245	511	15935	16000	37407	37407					0.11220087133369816
SLWKEVSEL	9	Unmodified	_SLWKEVSEL_					0	0	0		nc|ENSG00000025156|Q03933-2|HSF2;ENSG00000025156|ENST00000368455|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.7935058474541	2	545.792589	1089.57063	2.2983	0.0012544	-1.6066	-0.00087689	0.69163	0.00037749	545.7912951425625	57.194	0.33038	57.515	57.395	57.726	0.32103					21	12	2	0	0	0	0.056421	1	23970	23970		65.474	19.774	1	4467100			32246	623	15936	16001	37408	37408					0.029423058948623293
SLWKEVSEL	9	Unmodified	_SLWKEVSEL_					0	0	0		nc|ENSG00000025156|Q03933-2|HSF2;ENSG00000025156|ENST00000368455|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	545.792589	1089.57063	1.6388	0.00089443	-1.0586	-0.0005778	0.58013	0.00031663	545.791342282985	57.669	0.40903	57.669	57.536	57.945	0	0.14294	-6.6254E-05	NaN	65.474	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1557100			32247	623	15936	16001							0.029423058948623293
SLWKEVSEL	9	Unmodified	_SLWKEVSEL_					0	0	0		nc|ENSG00000025156|Q03933-2|HSF2;ENSG00000025156|ENST00000368455|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	545.792589	1089.57063	0.26035	0.0001421	-0.33991	-0.00018552	-0.079558	-4.3422E-05	545.7923405004873	55.996	0.32528	57.406	57.254	57.579	1.4099	-0.12001	0.0007183	NaN	65.474	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6373700			32248	623	15936	16001							0.029423058948623293
SLWKEVSEL	9	Unmodified	_SLWKEVSEL_					0	0	0		nc|ENSG00000025156|Q03933-2|HSF2;ENSG00000025156|ENST00000368455|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	nc|ENSG00000025156|Q03933-2|HSF2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	545.792589	1089.57063	0.47033	0.0002567	-0.76316	-0.00041653	-0.29283	-0.00015982	545.7917696804788	55.545	0.38067	57.514	57.336	57.717	1.9684	-0.012408	0.0002563	NaN	65.474	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4875600			32249	623	15936	16001							0.029423058948623293
SLWKGLVGI	9	Unmodified	_SLWKGLVGI_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7979919314384	2	486.797478	971.580402	1.7026	0.00082884	0.64116	0.00031212	2.3438	0.001141	486.7974600518952	66.548	0.35283	66.548	66.35	66.703	0					18	10	2	0	0	0	0.18809	2	27681	27681;27735		34.402	9.0024	1	1075200			32250	4092	15937	16002	37409;37410	37409					0.09347538690906276
SLWKGLVGI	9	Unmodified	_SLWKGLVGI_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7987243533134	2	486.797478	971.580402	2.6704	0.0012999	-0.036331	-1.7686E-05	2.634	0.0012822	486.7971678438227	65.977	0.3493	66.301	66.114	66.463	0.32449					19	10	2	0	0	0	0.1109	2	27602	27602;27650		45.7	21.026	1	1353700			32251	4092	15937	16002	37411;37412	37411					0.09347538690906276
SLWKGLVGI	9	Unmodified	_SLWKGLVGI_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7990600466728	2	486.797478	971.580402	3.2071	0.0015612	3.3457	0.0016287	6.5529	0.0031899	486.8000425183566	64.665	0.55407	66.072	65.77	66.324	1.4071					43	17	4	0	0	0	0.033102	2	27146	27146;27190		82.529	26.352	1	9999200			32252	4092	15937	16002	37413;37414	37413					0.09347538690906276
SLWKGLVGI	9	Unmodified	_SLWKGLVGI_					0	0	0		ENSG00000169446|ENST00000305963|MMGT1;nc|ENSG00000169446|Q8N4V1-2|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	ENSG00000169446|ENST00000305963|MMGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7988769412041	2	486.797478	971.580402	2.638	0.0012842	3.0061	0.0014634	5.6441	0.0027475	486.8003694981251	64.1	0.56142	66.028	65.764	66.325	1.928					37	17	3	0	0	0	0.037098	2	26911	26911;26968		78.728	28.795	1	7995800			32253	4092	15937	16002	37415;37416	37415					0.09347538690906276
SLWQDIPDV	9	Unmodified	_SLWQDIPDV_					0	0	0		nc|ENSG00000142632|Q8IW93-2|ARHGEF19;ENSG00000142632|ENST00000270747|ARHGEF19	nc|ENSG00000142632|Q8IW93-2|ARHGEF19	nc|ENSG00000142632|Q8IW93-2|ARHGEF19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.7698852419853	2	536.769114	1071.52368	2.2327	0.0011984	-0.35166	-0.00018876	1.881	0.0010097	536.7691138448306	76.611	0.317	76.933	76.791	77.108	0.32163					15	9	2	0	0	0	0.26473	1	32066	32066		36.127	14.38	1	1017300			32254	3001	15938	16003	37417	37417					-0.009225536563008063
SLWQEIPVV	9	Unmodified	_SLWQEIPVV_					0	0	0		nc|ENSG00000050327|Q12774-2|ARHGEF5;ENSG00000050327|ENST00000056217|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.7990600466728	2	535.797675	1069.5808	2.3841	0.0012774	0.64976	0.00034814	3.0338	0.0016255	535.7978455047422	84.815	0.47756	84.815	84.526	85.003	0					43	14	4	0	0	0	0.031377	3	35364	35281;35325;35364		85.272	34.417	1	5929500			32255	698	15939	16004	37418;37419;37420	37420					0.04878913620086678
SLWQEIPVV	9	Unmodified	_SLWQEIPVV_					0	0	0		nc|ENSG00000050327|Q12774-2|ARHGEF5;ENSG00000050327|ENST00000056217|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1070.596606433392	1	1070.58807	1069.5808	2.5195	0.0026973	3.3941	0.0036337	5.9135	0.006331	1070.593317837182	84.791	0.3513	84.791	84.589	84.94	0					17	10	2	0	0	0	0.031377	1	35331	35331		85.272	14.138	1	1130400			32256	698	15939	16004	37421	37421					0.04878913620086678
SLWQEIPVV	9	Unmodified	_SLWQEIPVV_					0	0	0		nc|ENSG00000050327|Q12774-2|ARHGEF5;ENSG00000050327|ENST00000056217|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.7997314333916	2	535.797675	1069.5808	2.5489	0.0013657	1.2092	0.00064787	3.7581	0.0020136	535.79819926137	84.299	0.50978	84.559	84.28	84.79	0.26083					44	15	4	0	0	0	0.019432	2	35269	35219;35269		99.799	41.12	1	5399600			32257	698	15939	16004	37422;37423	37423					0.04878913620086678
SLWQEIPVV	9	Unmodified	_SLWQEIPVV_					0	0	0		nc|ENSG00000050327|Q12774-2|ARHGEF5;ENSG00000050327|ENST00000056217|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7997314333916	2	535.797675	1069.5808	2.1346	0.0011437	0.88841	0.00047601	3.023	0.0016197	535.7979048122148	83.407	0.56468	84.595	84.326	84.89	1.1879					48	17	4	0	0	0	0.007852	5	34983	34935;34983;35022;35061;35108		111.29	57.142	1	27148000			32258	698	15939	16004	37424;37425;37426;37427;37428	37425					0.04878913620086678
SLWQEIPVV	9	Unmodified	_SLWQEIPVV_					0	0	0		nc|ENSG00000050327|Q12774-2|ARHGEF5;ENSG00000050327|ENST00000056217|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	nc|ENSG00000050327|Q12774-2|ARHGEF5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7986938357353	2	535.797675	1069.5808	2.5411	0.0013615	-1.3335	-0.00071446	1.2077	0.00064707	535.7966780363187	82.955	0.46892	84.625	84.386	84.855	1.67					46	14	4	0	0	0	0.007852	4	34773	34729;34773;34812;34849		111.29	62.297	1	27558000			32259	698	15939	16004	37429;37430;37431;37432	37430					0.04878913620086678
SLWQTYRWY	9	Unmodified	_SLWQTYRWY_					0	0	0			REV__ENST00000369578.6_1_6:87925633-87925750:+|nuORF	REV__ENST00000369578.6_1_6:87925633-87925750:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8820678591728	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.907	1	17.057	16.557	17.557	0.15093								0	0	0	0.42693	1	7015	7015		1.0715	0.3738	1		+		32260	12649	15940	16005	37433	37433					-0.019437807453869027
SLWWMYSHEYP	11	Unmodified	_SLWWMYSHEYP_					0	0	0			REV__nc|ENSG00000182183|Q6UWV7-2|SHISAL2A	REV__nc|ENSG00000182183|Q6UWV7-2|SHISAL2A	MSMS	GG20161007_CRH_Patient100_W632_01	3	749.8153564333916	2	749.826637	1497.63872	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.911	1	100.11	99.609	100.61	0.19767								0	0	0	0.63775	1	42053	42053		1.3295	0	1		+		32261	11342	15941	16006	37434	37434					-0.09019192516780095
SLYCRRWRYWE	11	Unmodified	_SLYCRRWRYWE_					0	0	0		ENST00000299314.11_1_12:102159966-102161843:-|nuORF	ENST00000299314.11_1_12:102159966-102161843:-|nuORF	ENST00000299314.11_1_12:102159966-102161843:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.9285156130791	3	539.929627	1616.76705	1.3029	0.00070346	-3.4423	-0.0018586	-2.1394	-0.0011551	539.9274089362665	38.004	0.17276	39.288	39.196	39.369	1.284					9	6	2	0	0	0	1.039	1	15959	15959		0.45452	0.35968	1	2850300			32262	5747	15942	16007	37435	37435					-0.016662124830190805
SLYCRRWRYWE	11	Unmodified	_SLYCRRWRYWE_					0	0	0		ENST00000299314.11_1_12:102159966-102161843:-|nuORF	ENST00000299314.11_1_12:102159966-102161843:-|nuORF	ENST00000299314.11_1_12:102159966-102161843:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	539.929627	1616.76705	0.84224	0.00045475	-6.3153	-0.0034098	-5.473	-0.0029551	539.9265609785836	37.365	0.13723	39.185	39.145	39.283	1.8202	-0.051241	-0.002948	NaN	0.45452	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	429090			32263	5747	15942	16007							-0.016662124830190805
SLYDWNVKL	9	Unmodified	_SLYDWNVKL_					0	0	0		nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1;ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000467683.5_1_1:154523946-154525290:-|nuORF;ENST00000497453.1_1_1:154524878-154531400:-|nuORF	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.3011962771416	2	569.300581	1136.58661	1.732	0.00098604	1.5076	0.00085829	3.2397	0.0018443	569.3013374731862	63.712	0.24855	63.712	63.524	63.773	0					14	7	3	0	0	0	0.25667	1	26552	26552		27.629	16.805	1	882440			32264	3569	15943	16008	37436	37436					0.02378012131748619
SLYDWNVKL	9	Unmodified	_SLYDWNVKL_					0	0	0		nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1;ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000467683.5_1_1:154523946-154525290:-|nuORF;ENST00000497453.1_1_1:154524878-154531400:-|nuORF	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.3016845583916	2	569.300581	1136.58661	1.7782	0.0010123	1.2986	0.00073927	3.0768	0.0017516	569.301359853307	63.16	0.2826	63.489	63.349	63.631	0.32974					15	8	2	0	0	0	0.46566	1	26467	26467		17.113	8.9574	1	921090			32265	3569	15943	16008	37437	37437					0.02378012131748619
SLYDWNVKL	9	Unmodified	_SLYDWNVKL_					0	0	0		nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1;ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000467683.5_1_1:154523946-154525290:-|nuORF;ENST00000497453.1_1_1:154524878-154531400:-|nuORF	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2993652224541	2	569.300581	1136.58661	2.9341	0.0016704	0.86026	0.00048975	3.7944	0.0021601	569.3001474677621	62	0.4118	63.418	63.176	63.588	1.4177					28	12	3	0	0	0	0.093059	2	25958	25958;26006		51.63	29.883	1	2920800			32266	3569	15943	16008	37438;37439	37438					0.02378012131748619
SLYDWNVKL	9	Unmodified	_SLYDWNVKL_					0	0	0		nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1;ENSG00000160714|ENST00000292211|UBE2Q1;ENST00000467683.5_1_1:154523946-154525290:-|nuORF;ENST00000497453.1_1_1:154524878-154531400:-|nuORF	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.3019897341728	2	569.300581	1136.58661	2.227	0.0012678	1.4368	0.00081796	3.6637	0.0020858	569.3004986123636	61.418	0.38454	63.375	63.209	63.594	1.9571					26	11	3	0	0	0	0.18809	2	25745	25745;25799		34.402	12.655	1	2351000			32267	3569	15943	16008	37440;37441	37440					0.02378012131748619
SLYEMVSRV	9	Unmodified	_SLYEMVSRV_					0	0	0		ENST00000293880.9_1_11:57098199-57100416:-|nuORF;ENSG00000149136|ENST00000278412|SSRP1	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.2790405154228	2	542.278792	1082.54303	1.8192	0.0009865	-0.97169	-0.00052693	0.84748	0.00045957	542.2780804819075	50.261	0.25388	50.261	50.12	50.373	0					14	8	2	0	0	0	0.44062	2	20955	20955;21001		18.373	5.3306	1	1409300			32268	3230	15944	16009	37442;37443	37442					0.005060793629809268
SLYEMVSRV	9	Unmodified	_SLYEMVSRV_					0	0	0		ENST00000293880.9_1_11:57098199-57100416:-|nuORF;ENSG00000149136|ENST00000278412|SSRP1	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.2805053591728	2	542.278792	1082.54303	1.743	0.00094521	-0.010548	-5.7201E-06	1.7325	0.00093949	542.2791539473576	49.732	0.31242	50.063	49.857	50.169	0.33019					19	9	3	0	0	0	0.33297	2	20851	20799;20851		23.79	3.3362	1	1535900			32269	3230	15944	16009	37444;37445	37445					0.005060793629809268
SLYEMVSRV	9	Unmodified	_SLYEMVSRV_					0	0	0		ENST00000293880.9_1_11:57098199-57100416:-|nuORF;ENSG00000149136|ENST00000278412|SSRP1	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2796508669853	2	542.278792	1082.54303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.873	1	49.849	49.349	50.349	1.976								0	0	0	0.041875	1	20050	20050		47.594	23.574	1				32270	3230	15944	16009	37446	37446					0.005060793629809268
SLYEMVSRV	9	Unmodified	_SLYEMVSRV_					0	0	0		ENST00000293880.9_1_11:57098199-57100416:-|nuORF;ENSG00000149136|ENST00000278412|SSRP1	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	ENST00000293880.9_1_11:57098199-57100416:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2805663943291	2	542.278792	1082.54303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.976	1	49.953	49.453	50.453	1.9772								0	0	0	0.16786	1	20094	20094		28.495	5.7582	1				32271	3230	15944	16009	37447	37447					0.005060793629809268
SLYGGNAVVEL	11	Unmodified	_SLYGGNAVVEL_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.2977783083916	2	561.295496	1120.57644	1.6587	0.00093103	2.4448	0.0013722	4.1035	0.0023033	561.2968865573962	60.396	0.28317	60.396	60.257	60.541	0					18	8	3	0	0	0	0.42228	1	25201	25201		26.268	9.3258	1	1365900			32272	4609	15945	16010	37448	37448					0.02097404406526948
SLYGGNAVVEL	11	Unmodified	_SLYGGNAVVEL_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.2971069216728	2	561.295496	1120.57644	2.2294	0.0012514	0.051173	2.8723E-05	2.2806	0.0012801	561.29587820884	59.871	0.2912	60.199	60.029	60.32	0.32809					13	9	2	0	0	0	0.54522	1	25096	25096		22.736	9.2284	1	1004600			32273	4609	15945	16010	37449	37449					0.02097404406526948
SLYGGNAVVEL	11	Unmodified	_SLYGGNAVVEL_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2975952029228	2	561.295496	1120.57644	1.5256	0.0008563	0.21458	0.00012044	1.7402	0.00097675	561.2959574593664	58.729	0.37815	60.148	59.941	60.319	1.4181					24	11	3	0	0	0	0.29237	1	24644	24644		32.786	9.6373	1	1668200			32274	4609	15945	16010	37450	37450					0.02097404406526948
SLYGGNAVVEL	11	Unmodified	_SLYGGNAVVEL_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	561.295496	1120.57644	1.211	0.00067972	1.1207	0.00062904	2.3317	0.0013088	561.7959677762185	58.162	0.41004	60.131	59.931	60.342	1.969	-0.087614	-6.1388E-05	NaN	32.786	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2619900			32275	4609	15945	16010							0.02097404406526948
SLYGGTITI	9	Unmodified	_SLYGGTITI_					0	0	0		ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	924.5054199099541	1	924.503674	923.496398	2.5448	0.0023527	-0.82784	-0.00076534	1.7169	0.0015873	924.5025683413401	58.768	0.34155	59.094	58.937	59.278	0.32553					26	11	3	0	0	0	0.026628	1	24650	24650		92.822	18.399	1	5135500			32276	3430	15946	16011	37451	37451					0.03158962803343002
SLYGGTITI	9	Unmodified	_SLYGGTITI_					0	0	0		ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	924.5037109255791	1	924.503674	923.496398	0.46155	0.00042671	-0.66952	-0.00061897	-0.20797	-0.00019227	924.5025157117302	57.616	0.32937	59.034	58.85	59.179	1.4181					42	22	2	0	0	0	0.0075027	3	24116	24116;24154;24194		112.59	38.17	1	16421000			32277	3430	15946	16011	37452;37453;37454	37452					0.03158962803343002
SLYGGTITI	9	Unmodified	_SLYGGTITI_					0	0	0		ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	ENSG00000155827|ENST00000389120|RNF20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	924.5049316287041	1	924.503674	923.496398	0.71326	0.00065941	-0.68762	-0.00063571	0.025634	2.3699E-05	924.5028872236843	57.109	0.35877	59.077	58.845	59.203	1.9684					34	19	2	0	0	0	0.026628	2	23907	23907;23952		92.822	18.399	1	14437000			32278	3430	15946	16011	37455;37456	37455					0.03158962803343002
SLYIMRVV	8	Unmodified	_SLYIMRVV_					0	0	0		ENSG00000177519|ENST00000325926|RPRM	ENSG00000177519|ENST00000325926|RPRM	ENSG00000177519|ENST00000325926|RPRM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.7834045290947	2	490.783513	979.552473	2.2266	0.0010928	-1.1799	-0.00057909	1.0466	0.00051368	490.78170872132046	47.775	0.31045	49.157	48.986	49.297	1.3825					20	9	3	0	0	0	0.7006	1	19996	19996		30.225	3.3412	1	1636900			32279	4451	15947	16012	37457	37457					0.06187892439163534
SLYKAAGV	8	Unmodified	_SLYKAAGV_					0	0	0		ENST00000261489.6_2_13:45010747-45010900:-|nuORF	ENST00000261489.6_2_13:45010747-45010900:-|nuORF	ENST00000261489.6_2_13:45010747-45010900:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.7302429080009	2	404.731803	807.449054	0.92823	0.00037568	-3.33	-0.0013477	-2.4017	-0.00097206	404.73033789433003	57.091	0.28728	58.505	58.431	58.718	1.4145					17	9	2	0	0	0	0.73597	2	23924	23924;23975		26.884	2.8631	1	5453400			32280	5624	15948	16013	37458;37459	37458					0.037627283229994646
SLYKAAGV	8	Unmodified	_SLYKAAGV_					0	0	0		ENST00000261489.6_2_13:45010747-45010900:-|nuORF	ENST00000261489.6_2_13:45010747-45010900:-|nuORF	ENST00000261489.6_2_13:45010747-45010900:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.7310974001884	2	404.731803	807.449054	0.79069	0.00032002	-3.1687	-0.0012825	-2.378	-0.00096246	404.7306236771596	56.622	0.26749	58.59	58.425	58.693	1.9684					15	8	2	0	0	0	0.73597	2	23768	23716;23768		26.884	2.8631	1	6619000			32281	5624	15948	16013	37460;37461	37461					0.037627283229994646
SLYKGLLSV	9	Unmodified	_SLYKGLLSV_					0	0	0		ENSG00000197275|ENST00000336148|RAD54B	ENSG00000197275|ENST00000336148|RAD54B	ENSG00000197275|ENST00000336148|RAD54B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2981750369072	2	490.294768	978.574983	2.6321	0.0012905	1.4191	0.00069577	4.0512	0.0019863	490.2957126627081	50.344	0.3411	51.738	51.583	51.924	1.3938					21	10	3	0	0	0	0.15815	2	21051	21051;21099		47.594	14.809	1	2215200			32282	4992	15949	16014	37462;37463	37462					0.0848381510844547
SLYKGLLSV	9	Unmodified	_SLYKGLLSV_					0	0	0		ENSG00000197275|ENST00000336148|RAD54B	ENSG00000197275|ENST00000336148|RAD54B	ENSG00000197275|ENST00000336148|RAD54B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2968627810478	2	490.294768	978.574983	1.7641	0.00086491	2.7666	0.0013564	4.5306	0.0022213	490.29615555586724	49.793	0.31347	51.77	51.569	51.883	1.9772					19	9	3	0	0	0	0.14534	2	20827	20827;20881		49.554	13.427	1	1859900			32283	4992	15949	16014	37464;37465	37464					0.0848381510844547
SLYMDRIFFV	10	Unmodified	_SLYMDRIFFV_					0	0	0		ENST00000389682.7_1_2:122523087-122523240:+|nuORF	ENST00000389682.7_1_2:122523087-122523240:+|nuORF	ENST00000389682.7_1_2:122523087-122523240:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882934451103	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.646	1	17.544	17.044	18.044	0.89794								0	0	0	0.66151	1	6923	6923		1.9064	0.83491	1				32284	6246	15950	16015	37466	37466					0.014592008395084122
SLYQFLQRI	9	Unmodified	_SLYQFLQRI_					0	0	0		ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3258544802666	2	584.329673	1166.64479	1.8741	0.0010951	-4.2806	-0.0025013	-2.4065	-0.0014062	584.3264605932388	74.122	0.25413	74.122	73.952	74.206	0					17	7	3	0	0	0	0.22154	1	30851	30851		30.637	14.789	1	902760			32285	5743	15951	16016	37467	37467					0.06813693777030494
SLYQFLQRI	9	Unmodified	_SLYQFLQRI_					0	0	0		ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3242065310478	2	584.329673	1166.64479	2.2029	0.0012872	-2.9003	-0.0016948	-0.69746	-0.00040755	584.3262258971473	73.556	0.25341	73.881	73.754	74.008	0.32494					18	7	4	0	0	0	0.17276	1	30792	30792		36.127	10.728	1	838930			32286	5743	15951	16016	37468	37468					0.06813693777030494
SLYQFLQRI	9	Unmodified	_SLYQFLQRI_					0	0	0		ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	584.329673	1166.64479	2.5688	0.001501	-4.1729	-0.0024384	-1.6042	-0.00093736	584.3269176358853	72.387	0.36604	73.717	73.486	73.852	1.3297	-0.13608	-0.0011252	NaN	36.127	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3161900			32287	5743	15951	16016							0.06813693777030494
SLYQFLQRI	9	Unmodified	_SLYQFLQRI_					0	0	0		ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	ENST00000298767.9_1_10:88277558-88277621:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	584.329673	1166.64479	2.4093	0.0014078	-1.9835	-0.001159	0.42582	0.00024882	584.3280925212399	71.868	0.2471	73.691	73.539	73.786	1.824	-0.16136	0.0014335	NaN	36.127	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2318300			32288	5743	15951	16016							0.06813693777030494
SLYRDFSTFL	10	Unmodified	_SLYRDFSTFL_					0	0	0		ENST00000326764.9_2_19:54972187-54972391:+|nuORF	ENST00000326764.9_2_19:54972187-54972391:+|nuORF	ENST00000326764.9_2_19:54972187-54972391:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	624.8141967654228	2	624.816596	1247.61864	0.98362	0.00061458	-4.2903	-0.0026807	-3.3067	-0.0020661	624.813938951953	67.489	0.34234	69.359	69.176	69.519	1.87					20	10	2	0	0	0	0.75645	1	28347	28347		15.847	1.0089	1	1067600			32289	5871	15952	16017	37469	37469					0.004733798148890855
SLYRDFSTFL	10	Unmodified	_SLYRDFSTFL_					0	0	0		ENST00000326764.9_2_19:54972187-54972391:+|nuORF	ENST00000326764.9_2_19:54972187-54972391:+|nuORF	ENST00000326764.9_2_19:54972187-54972391:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	624.816596	1247.61864	1.7741	0.0011085	-6.5209	-0.0040743	-4.7468	-0.0029659	624.8128110820037	68.032	0.4894	69.409	69.125	69.615	1.3778	0.025348	-0.0012336	NaN	15.847	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1009200			32290	5871	15952	16017							0.004733798148890855
SLYREILFL	9	Unmodified	_SLYREILFL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	577.7748290896416	2	577.334424	1152.6543	3.3298	0.0019224	1.3164	0.00076	4.6462	0.0026824	577.3360092674424	74.137	0.46275	75.455	75.248	75.711	1.318					27	14	3	0	0	0	0.10705	1	31150	31150		22.658	0.91144	1	3103200			32291	2760;4333	15953	16018	37470	37470					0.08407462062564264
SLYREILFL	9	Unmodified	_SLYREILFL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	577.334424	1152.6543	1.7548	0.0010131	2.2006	0.0012705	3.9553	0.0022836	577.3359601227432	75.861	0.38113	75.861	75.691	76.073	0	0.29159	0.0014566	NaN	22.658	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	677870			32292	2760;4333	15953	16018							0.08407462062564264
SLYREILFL	9	Unmodified	_SLYREILFL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	577.334424	1152.6543	2.3827	0.0013756	2.646	0.0015276	5.0287	0.0029032	577.3368989768135	75.274	0.28821	75.599	75.425	75.713	0.32464	0.030172	0.0019709	NaN	22.658	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1147100			32293	2760;4333	15953	16018							0.08407462062564264
SLYREILFL	9	Unmodified	_SLYREILFL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A;nc|ENSG00000174485|Q7Z401-2|DENND4A;ENSG00000174485|ENST00000443035|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C;nc|ENSG00000174485|Q7Z401|DENND4A	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	577.334424	1152.6543	2.7915	0.0016116	-1.0284	-0.00059371	1.7632	0.0010179	577.3348989763255	73.565	0.37301	75.361	75.163	75.536	1.7962	-0.20745	-0.0022718	NaN	22.658	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2661500			32294	2760;4333	15953	16018							0.08407462062564264
SLYRRFRRERR	11	Unmodified	_SLYRRFRRERR_					0	0	0			REV__nc|ENSG00000204498|Q9UBC1-2|NFKBIL1	REV__nc|ENSG00000204498|Q9UBC1-2|NFKBIL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	797.6447631716728	2	797.961106	1593.90766	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.03	1	100.21	99.714	100.71	0.18047								0	0	0	0.63775	1	42100	42100		1.3295	1.0225	1		+		32295	11785	15954	16019	37471	37471					0.13446127285374132
SLYTDKSTF	9	Unmodified	_SLYTDKSTF_					0	0	0			REV__ENST00000546313.1_1_11:114167278-114168881:+|nuORF	REV__ENST00000546313.1_1_11:114167278-114168881:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.3537475466728	2	531.261122	1060.50769	2.0504	0.0010893	2.9812	0.0015838	5.0316	0.0026731	531.2627709158497	70.323	0.30721	72.161	72.041	72.349	1.8378					14	9	2	0	0	0	0.11463	1	29449	29449		12.532	7.7755	1	1099000	+		32296	10834	15955	16020	37472	37472					-0.020142598931897737
SLYTREFTMEK	11	Oxidation (M)	_SLYTREFTM(Oxidation (M))EK_		SLYTREFTM(1)EK		SLYTREFTM(48)EK	0	0	1		ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	710.8441650271416	2	710.842484	1419.67042	2.1465	0.0015258	-0.25657	-0.00018238	1.89	0.0013435	710.8423331927124	47.006	1.0867	47.006	46.785	47.872	0					89	34	4	0	0	0	0.14486	1	19647	19647		47.732	23.942	1	10300000			32297	6529	15956	16021	37473	37473		105			-0.022632445535009538
SLYTREFTMEK	11	Oxidation (M)	_SLYTREFTM(Oxidation (M))EK_		SLYTREFTM(1)EK		SLYTREFTM(40)EK	0	0	1		ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	ENST00000435989.6_1_19:58384023-58384878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	710.8443481326103	2	710.842484	1419.67042	1.7054	0.0012123	-0.38797	-0.00027578	1.3174	0.00093647	710.8421584213337	46.514	0.5507	46.843	46.681	47.232	0.3295					50	18	4	0	0	0	0.19749	1	19516	19516		40.239	19.825	1	2555400			32298	6529	15956	16021	37474	37474		105			-0.022632445535009538
SLYVGLGT	8	Unmodified	_SLYVGLGT_					0	0	0			REV__nc|ENSG00000172148|Q8NGA2|OR7A2P	REV__nc|ENSG00000172148|Q8NGA2|OR7A2P	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1792175173759	2	405.223811	808.433069	0.074537	3.0204E-05	1.5705	0.0006364	1.645	0.00066661	405.22453041024437	17.13	0.20779	18.028	17.905	18.113	0.89794					9	6	2	0	0	0	2.3239	1	7091	7091		2.5775	0	1	274260	+		32299	9718	15957	16022	37475	37475					0.021190220861171838
SLYVKDLDL	9	Unmodified	_SLYVKDLDL_					0	0	0			REV__nc|ENSG00000157510|Q8TED9-3|AFAP1L1	REV__nc|ENSG00000157510|Q8TED9-3|AFAP1L1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1922485232353	2	533.294965	1064.57538	2.7252	0.0014534	1.2362	0.00065927	3.9615	0.0021126	533.2956892248	89.986	0.38731	90.195	89.985	90.372	0.20904					21	11	2	0	0	0	0.11463	1	37759	37759		12.532	0	1	1533200	+		32300	13162	15958	16023	37476	37476					0.04567190037619184
SLYVKDRLIH	10	Unmodified	_SLYVKDRLIH_					0	0	0			REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant;REV__ENSG00000181234|ENST00000435159|TMEM132C	REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	622.3654052615166	2	622.361505	1242.70846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.8	1	51.8	51.3	52.3	0								0	0	0	0.66151	1	21603	21603		3.9444	0	1		+		32301	10408;11319	15959	16024	37477	37477					0.09681054214138385
SLYVVKQQL	9	Unmodified	_SLYVVKQQL_					0	0	0			REV__nc|ENSG00000129226|P34810-2|CD68	REV__nc|ENSG00000129226|P34810-2|CD68	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	539.7831298708916	2	539.318774	1076.623	3.1615	0.001705	1.5069	0.00081271	4.6684	0.0025177	539.3184234139604	65.049	0.62512	66.448	66.316	66.941	1.3989					32	19	3	0	0	0	0.097511	1	27415	27415		23.148	0	1	966470	+		32302	9751	15960	16025	37478	37478					0.08774889028472899
SMADIPLGFGV	11	Unmodified	_SMADIPLGFGV_					0	0	0		ENSG00000132603|ENST00000254940|NIP7;ENST00000485801.1_1_3:132120486-132120636:+|nuORF	ENSG00000132603|ENST00000254940|NIP7	ENSG00000132603|ENST00000254940|NIP7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	553.3395263552666	2	553.781167	1105.54778	1.7166	0.00095061	1.4952	0.00082804	3.2118	0.0017786	553.7825784400586	82.6	0.30675	82.6	82.4	82.706	0					13	9	2	0	0	0	0.14606	1	34408	34408		13.906	6.6168	1	741910			32303	2541	15961	16026	37479	37479					-0.0007703649425820913
SMADIPLGFGV	11	Unmodified	_SMADIPLGFGV_					0	0	0		ENSG00000132603|ENST00000254940|NIP7;ENST00000485801.1_1_3:132120486-132120636:+|nuORF	ENSG00000132603|ENST00000254940|NIP7	ENSG00000132603|ENST00000254940|NIP7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.7822143435478	2	553.781167	1105.54778	2.12	0.001174	-0.25323	-0.00014024	1.8668	0.0010338	553.7816773000999	82.163	0.27718	82.444	82.274	82.551	0.2802					12	8	2	0	0	0	0.50052	1	34335	34335		24.021	15.275	1	812720			32304	2541	15961	16026	37480	37480					-0.0007703649425820913
SMADIPLGFGV	11	Unmodified	_SMADIPLGFGV_					0	0	0		ENSG00000132603|ENST00000254940|NIP7;ENST00000485801.1_1_3:132120486-132120636:+|nuORF	ENSG00000132603|ENST00000254940|NIP7	ENSG00000132603|ENST00000254940|NIP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.7818481326103	2	553.781167	1105.54778	3.0652	0.0016975	0.57312	0.00031738	3.6384	0.0020149	553.7823748090955	81.178	0.40186	82.411	82.255	82.656	1.2332					32	12	3	0	0	0	0.04356	3	34104	34056;34104;34161		68.081	47.089	1	2207700			32305	2541	15961	16026	37481;37482;37483	37482					-0.0007703649425820913
SMADIPLGFGV	11	Unmodified	_SMADIPLGFGV_					0	0	0		ENSG00000132603|ENST00000254940|NIP7;ENST00000485801.1_1_3:132120486-132120636:+|nuORF	ENSG00000132603|ENST00000254940|NIP7	ENSG00000132603|ENST00000254940|NIP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7823974490166	2	553.781167	1105.54778	2.1878	0.0012115	0.92404	0.00051171	3.1118	0.0017233	553.7822141810008	80.803	0.36851	82.499	82.303	82.671	1.6959					35	11	4	0	0	0	0.03513	2	33882	33882;33939		74.929	50.908	1	2283400			32306	2541	15961	16026	37484;37485	37484					-0.0007703649425820913
SMFGAGLTV	9	Unmodified	_SMFGAGLTV_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	882.4399291872978	1	882.438966	881.431689	1.9505	0.0017212	0.27312	0.00024101	2.2236	0.0019622	882.4396362050426	63.603	0.31472	63.603	63.429	63.744	0					16	9	2	0	0	0	0.076627	1	26511	26511		57.471	25.354	1	1186700			32307	2006	15962	16027	37486	37486					-0.013769352743224772
SMFGAGLTV	9	Unmodified	_SMFGAGLTV_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	882.4428588747978	1	882.438966	881.431689	1.947	0.0017181	1.1155	0.00098435	3.0625	0.0027024	882.4410658159504	63.128	0.34441	63.457	63.255	63.599	0.32974					22	10	3	0	0	0	0.076627	2	26451	26451;26498		57.471	27.247	1	1376900			32308	2006	15962	16027	37487;37488	37487					-0.013769352743224772
SMFGAGLTV	9	Unmodified	_SMFGAGLTV_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	882.4399291872978	1	882.438966	881.431689	2.7792	0.0024524	-0.28796	-0.00025411	2.4912	0.0021983	882.4388228194704	61.957	0.4116	63.375	63.113	63.524	1.4177					32	12	3	0	0	0	0.042029	3	26035	25931;25978;26035		74.423	42.306	1	3407400			32309	2006	15962	16027	37489;37490;37491	37491					-0.013769352743224772
SMFGAGLTV	9	Unmodified	_SMFGAGLTV_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.7241393923759	2	441.723121	881.431689	3.1222	0.0013791	-1.3099	-0.00057863	1.8123	0.00080051	441.72232383604165	61.952	0.22145	63.37	63.238	63.459	1.4177					9	6	2	0	0	0	0.68551	1	25985	25985		7.9102	1.5561	1	531150			32310	2006	15962	16027	37492	37492					-0.013769352743224772
SMFGAGLTV	9	Unmodified	_SMFGAGLTV_					0	0	0		ENSG00000117410|ENST00000472174|ATP6V0B;nc|ENSG00000117410|Q99437-2|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	ENSG00000117410|ENST00000472174|ATP6V0B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	882.4410278201103	1	882.438966	881.431689	2.0639	0.0018213	0.31823	0.00028082	2.3821	0.0021021	882.4393237414239	61.392	0.41351	63.349	63.148	63.562	1.9571					31	12	3	0	0	0	0.042029	3	25769	25721;25769;25823		74.423	38.828	1	3504400			32311	2006	15962	16027	37493;37494;37495	37494					-0.013769352743224772
SMFGIQIS	8	Unmodified	_SMFGIQIS_					0	0	0			REV__ENSG00000171408|ENST00000308191|PDE7B	REV__ENSG00000171408|ENST00000308191|PDE7B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	882.4457275271416	1	882.438966	881.431689	1.947	0.0017181	1.1155	0.00098435	3.0625	0.0027024	882.4410658159504	63.128	0.34441	63.457	63.255	63.599	0.32974					22	10	3	0	0	0	0.7006	1	26405	26405		30.225	1.738	1	1376900	+		32312	11023	15963	16028	37496	37496					-0.013769352743111085
SMFGKLIDL	9	Unmodified	_SMFGKLIDL_					0	0	0		nc|ENSG00000138614|Q96SY0-4|INTS14;nc|ENSG00000138614|Q96SY0-3|INTS14;ENSG00000138614|ENST00000313182|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	nc|ENSG00000138614|Q96SY0-4|INTS14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2816650271416	2	512.280803	1022.54705	2.3127	0.0011847	-0.59301	-0.00030379	1.7197	0.00088096	512.2806184038764	68.498	0.44058	70.357	70.062	70.503	1.8587					23	13	2	0	0	0	0.18969	2	28720	28672;28720		43.772	16.889	1	2080300			32313	2839	15964	16029	37497;37498	37498					0.03668168856700049
SMGPVRVAF	9	Oxidation (M)	_SM(Oxidation (M))GPVRVAF_		SM(1)GPVRVAF		SM(60)GPVRVAF	0	0	1		nc|ENSG00000118523|P29279-2|CCN2;ENSG00000118523|ENST00000367976|CCN2	nc|ENSG00000118523|P29279-2|CCN2	nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2552978396416	2	490.25512	978.495686	0.65592	0.00032157	-0.14574	-7.1449E-05	0.51018	0.00025012	490.25514656716285	32.145	0.61449	33.426	33.307	33.921	1.2813					48	20	3	0	0	0	0.070055	3	13480	13480;13528;13574		60.074	35.4	1	5783100			32314	2040	15965	16030	37499;37500;37501	37499		37			0.005578448826440763
SMGPVRVAF	9	Oxidation (M)	_SM(Oxidation (M))GPVRVAF_		SM(1)GPVRVAF		SM(60)GPVRVAF	0	0	1		nc|ENSG00000118523|P29279-2|CCN2;ENSG00000118523|ENST00000367976|CCN2	nc|ENSG00000118523|P29279-2|CCN2	nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2546264529228	2	490.25512	978.495686	0.94409	0.00046284	-0.95029	-0.00046589	-0.0062067	-3.0429E-06	490.25483521802477	31.683	0.57772	33.507	33.27	33.848	1.8246					47	21	3	0	0	0	0.070055	4	13263	13217;13263;13305;13347		60.074	35.4	1	4516200			32315	2040	15965	16030	37502;37503;37504;37505	37503		37			0.005578448826440763
SMGPVRVAF	9	Unmodified	_SMGPVRVAF_					0	0	0		nc|ENSG00000118523|P29279-2|CCN2;ENSG00000118523|ENST00000367976|CCN2	nc|ENSG00000118523|P29279-2|CCN2	nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2588989138603	2	482.257662	962.500772	1.8834	0.00090831	0.050331	2.4273E-05	1.9338	0.00093258	482.25787574128026	42.536	0.47476	43.876	43.602	44.077	1.3399					52	14	5	0	0	0	0.040497	3	17804	17768;17804;17843		75.761	51.087	1	47257000			32316	2040	15965	16031	37506;37507;37508	37507					0.018021487452529072
SMGPVRVAF	9	Unmodified	_SMGPVRVAF_					0	0	0		nc|ENSG00000118523|P29279-2|CCN2;ENSG00000118523|ENST00000367976|CCN2	nc|ENSG00000118523|P29279-2|CCN2	nc|ENSG00000118523|P29279-2|CCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2587768435478	2	482.257662	962.500772	1.562	0.00075327	-0.63264	-0.0003051	0.92932	0.00044817	482.25752655431324	41.951	0.4714	43.873	43.601	44.072	1.9211					47	14	5	0	0	0	0.053939	3	17536	17536;17581;17620		66.457	47.018	1	46656000			32317	2040	15965	16031	37509;37510;37511	37509					0.018021487452529072
SMHDLVLQV	9	Unmodified	_SMHDLVLQV_					0	0	0		nc|ENSG00000168077|Q6AZY7-2|SCARA3;ENSG00000168077|ENST00000301904|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2751342654228	2	521.273509	1040.53247	1.7612	0.00091808	1.9611	0.0010223	3.7223	0.0019404	521.2745370944384	48.283	0.28111	49.671	49.552	49.833	1.388					15	8	3	0	0	0	0.27148	1	20216	20216		26.884	7.4447	1	981150			32318	4015	15966	16032	37512	37512					0.013820967085393931
SMHDLVLQV	9	Unmodified	_SMHDLVLQV_					0	0	0		nc|ENSG00000168077|Q6AZY7-2|SCARA3;ENSG00000168077|ENST00000301904|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	nc|ENSG00000168077|Q6AZY7-2|SCARA3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	521.273509	1040.53247	2.425	0.0012641	0.26583	0.00013857	2.6908	0.0014027	521.2732247949152	47.788	0.18633	49.764	49.649	49.836	1.976	0.046541	-0.0011525	NaN	26.884	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	553270			32319	4015	15966	16032							0.013820967085393931
SMHSRHRN	8	Unmodified	_SMHSRHRN_					0	0	0			REV__ENSG00000170631|ENST00000394909|ZNF16	REV__ENSG00000170631|ENST00000394909|ZNF16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7481567263603	2	512.746316	1023.47808	1.3913	0.00071339	2.7625	0.0014164	4.1538	0.0021298	512.7474934416556	70.216	0.38917	70.538	70.319	70.708	0.32224					44	12	5	0	0	0	0.86113	1	29385	29385		15.847	1.0089	1	7560100	+		32320	10995	15967	16033	37513	37513					-0.03272057599644995
SMLNRILAV	9	Unmodified	_SMLNRILAV_					0	0	0		nc|ENSG00000147130|Q14202-2|ZMYM3;ENSG00000147130|ENST00000314425|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.8000671267509	2	508.799694	1015.58484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.68	1	60.68	60.18	61.18	0								0	0	0	0.089791	1	25304	25304		36.506	8.8774	1				32321	3171	15968	16034	37514	37514					0.07766679842154645
SMLTVMDVV	9	Unmodified	_SMLTVMDVV_					0	0	0			REV__nc|ENSG00000005844|P20701-3|ITGAL	REV__nc|ENSG00000005844|P20701-3|ITGAL	MSMS	GG20161007_CRH_Patient100_W632_01	3	332.1711303591728	3	332.169773	993.48749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.109	1	22.235	21.735	22.735	1.1254								0	0	0	0.42693	1	8809	8809		1.0715	0	1		+		32322	8503	15969	16035	37515	37515					-0.009514701490047628
SMMDPNHFL	9	Unmodified	_SMMDPNHFL_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	546.8257324099541	2	546.23607	1090.45759	1.6366	0.00089398	1.9067	0.0010415	3.5433	0.0019355	546.2373110592162	49.964	0.31174	51.941	51.758	52.07	1.9772					16	9	2	0	0	0	0.11684	1	20972	20972		7.9102	5.0209	1	961620			32323	621	15970	16036	37516	37516					-0.08402409094333052
SMMDPNHFL	9	Unmodified	_SMMDPNHFL_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	546.23607	1090.45759	2.0649	0.0011279	1.3723	0.00074957	3.4372	0.0018775	546.2370631923591	50.505	0.43168	51.899	51.615	52.047	1.3938	-0.020872	-0.00029075	NaN	7.9102	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	902380			32324	621	15970	16036							-0.08402409094333052
SMMFYVLISIS	11	Unmodified	_SMMFYVLISIS_					0	0	0			REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	REV__tr|A0A7D6ZIV8|A0A7D6ZIV8_9CLOTL,D-transpeptidase/peptidoglycanbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888427615166	3	430.887266	1289.63997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8149	1	4.5601	4.0601	5.0601	0.74525								0	0	0	0.63775	1	1581	1581		0.094841	0.094841	1		+		32325	15665	15971	16037	37517	37517					0.00673305527766388
SMMQTLLTV	9	Unmodified	_SMMQTLLTV_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2662231326103	2	512.264296	1022.51404	3.0261	0.0015502	-0.15918	-8.1542E-05	2.867	0.0014686	512.2652981417818	73.29	0.56371	75.1	74.828	75.391	1.8101					54	17	5	0	0	0	0.079895	1	30697	30697		56.177	5.322	1	12566000			32326	1387	15972	16038	37518	37518					0.0036821874232373375
SMMQTLLTV	9	Unmodified	_SMMQTLLTV_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	512.264296	1022.51404	2.0946	0.001073	3.7229	0.0019071	5.8174	0.0029801	512.2672555625682	75.371	0.38116	75.371	75.185	75.566	0	0.14831	0.0037931	NaN	56.177	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1942900			32327	1387	15972	16038							0.0036821874232373375
SMMQTLLTV	9	Unmodified	_SMMQTLLTV_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	512.264296	1022.51404	2.7333	0.0014001	1.2369	0.00063362	3.9701	0.0020338	512.2656540792161	74.928	0.37286	75.252	75.02	75.393	0.32464	0.0292	0.0012461	NaN	56.177	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3393800			32328	1387	15972	16038							0.0036821874232373375
SMMQTLLTV	9	Unmodified	_SMMQTLLTV_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	512.264296	1022.51404	3.811	0.0019523	-1.1016	-0.00056429	2.7095	0.001388	512.2647084365595	73.851	0.46878	75.169	74.873	75.342	1.318	-0.05449	-0.0011497	NaN	56.177	47	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15361000			32329	1387	15972	16038							0.0036821874232373375
SMPDFDLHL	9	Unmodified	_SMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.7508422732353	2	537.749867	1073.48518	1.6194	0.00087081	-0.026327	-1.4157E-05	1.593	0.00085665	537.7501915418757	66.39	0.76981	66.39	66.123	66.893	0					63	23	4	0	0	0	0.069258	4	27649	27600;27649;27691;27754		60.39	30.165	1	4000800			32330	30	15973	16039	37519;37520;37521;37522	37520					-0.04862182562465023
SMPDFDLHL	9	Unmodified	_SMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.7514526247978	2	537.749867	1073.48518	1.981	0.0010653	-0.085141	-4.5784E-05	1.8959	0.0010195	537.7501006397175	65.868	0.82284	66.193	65.926	66.749	0.32449					68	25	4	0	0	0	0.069258	5	27544	27544;27582;27621;27661;27717		60.39	30.165	1	4764400			32331	30	15973	16039	37523;37524;37525;37526;37527	37523					-0.04862182562465023
SMPDFDLHL	9	Unmodified	_SMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7512695193291	2	537.749867	1073.48518	3.2698	0.0017583	-0.63743	-0.00034278	2.6324	0.0014156	537.7496759296115	64.664	1.0553	66.071	65.77	66.825	1.4071					85	33	3	0	0	0	0.046276	6	27118	27081;27118;27157;27196;27236;27281		70.716	40.491	1	24354000			32332	30	15973	16039	37528;37529;37530;37531;37532;37533	37529					-0.04862182562465023
SMPDFDLHL	9	Unmodified	_SMPDFDLHL_					0	0	0		AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant;ENSG00000124942|ENST00000378024|AHNAK	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	AHNAK|p.D5149Tfs*7|1|0.04|ENSG00000124942|chr11:62518972-62518972|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7515746951103	2	537.749867	1073.48518	2.6852	0.001444	-0.20278	-0.00010904	2.4824	0.0013349	537.7498896719534	64.1	1.0065	66.028	65.764	66.77	1.928					84	31	3	0	0	0	0.046276	5	26908	26858;26908;26947;26987;27030		70.716	40.491	1	18624000			32333	30	15973	16039	37534;37535;37536;37537;37538	37535					-0.04862182562465023
SMSADVPLV	9	Unmodified	_SMSADVPLV_					0	0	0		ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	ENSG00000132646|ENST00000379143|PCNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.4598876833916	1	918.460095	917.452819	0.35006	0.00032152	0.35202	0.00032332	0.70208	0.00064483	918.4608055565169	51.415	0.17264	53.39	53.287	53.46	1.9753					7	5	2	0	0	0	0.046276	1	21565	21565		70.716	32.564	1	676670			32334	2543	15974	16040	37539	37539					-0.00920969965443419
SMTDVLTML	9	Unmodified	_SMTDVLTML_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7507202029228	2	505.748479	1009.4824	2.5119	0.0012704	2.4455	0.0012368	4.9574	0.0025072	505.74938670713544	83.277	0.31636	84.465	84.294	84.61	1.1879					16	9	3	0	0	0	0.25667	1	34939	34939		30.225	16.717	1	1305300			32335	2109	15975	16041	37540	37540					-0.02195774011636331
SMTDVLTML	9	Unmodified	_SMTDVLTML_					0	0	0		KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant;nc|ENSG00000120549|Q5T5P2-9|KIAA1217;nc|ENSG00000120549|Q5T5P2-2|KIAA1217;nc|ENSG00000120549|Q5T5P2-7|KIAA1217;nc|ENSG00000120549|Q5T5P2-10|KIAA1217;ENSG00000120549|ENST00000376454|KIAA1217;nc|ENSG00000120549|Q5T5P2-4|KIAA1217;nc|ENSG00000120549|Q5T5P2-8|KIAA1217;nc|ENSG00000120549|Q5T5P2-6|KIAA1217;nc|ENSG00000120549|Q5T5P2-3|KIAA1217	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	KIAA1217|p.V1115Sfs*19|1|0.06|ENSG00000120549|chr10:24533166-24533166|G/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	505.748479	1009.4824	2.5454	0.0012874	0.37041	0.00018734	2.9159	0.0014747	505.7484033355064	82.794	0.31175	84.464	84.294	84.606	1.67	-0.00084549	-0.00061363	NaN	30.225	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	477680			32336	2109	15975	16041							-0.02195774011636331
SMTLAIHEI	9	Unmodified	_SMTLAIHEI_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.7693054080009	2	507.76806	1013.52157	2.2235	0.001129	-1.3979	-0.00070982	0.82559	0.00041921	507.7683580848654	47.912	0.41103	47.912	47.714	48.125	0					25	12	3	0	0	0	0.066815	2	20037	19993;20037		61.357	19.263	1	1974200			32337	3050	15976	16042	37541;37542	37542					0.01534694334247888
SMTLAIHEI	9	Unmodified	_SMTLAIHEI_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.7697631716728	2	507.76806	1013.52157	2.0147	0.001023	-0.19973	-0.00010141	1.815	0.00092158	507.7687266575256	47.444	0.32436	47.774	47.604	47.928	0.33034					22	10	3	0	0	0	0.045797	2	19918	19869;19918		71.134	3.901	1	3216000			32338	3050	15976	16042	37543;37544	37544					0.01534694334247888
SMTLAIHEI	9	Unmodified	_SMTLAIHEI_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7698852419853	2	507.76806	1013.52157	2.1871	0.0011105	0.32971	0.00016742	2.5168	0.0012779	507.7687329046976	45.818	0.40474	47.193	46.96	47.365	1.3751					38	12	4	0	0	0	0.029093	3	19234	19145;19195;19234		88.904	10.919	1	9331000			32339	3050	15976	16042	37545;37546;37547	37547					0.01534694334247888
SMTLAIHEI	9	Unmodified	_SMTLAIHEI_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7695190310478	2	507.76806	1013.52157	1.7437	0.0008854	0.29816	0.00015139	2.0419	0.0010368	507.76866942601237	45.308	0.4398	47.267	47.021	47.46	1.9596					41	13	4	0	0	0	0.045797	3	18984	18933;18984;19038		71.134	3.9264	1	7807400			32340	3050	15976	16042	37548;37549;37550	37549					0.01534694334247888
SMTRYFYLF	9	Unmodified	_SMTRYFYLF_					0	0	0		nc|ENSG00000204403|Q6UXS9-3|CASP12;nc|ENSG00000204403|Q6UXS9-7|CASP12;nc|ENSG00000204403|Q6UXS9-5|CASP12;ENST00000531091.5_1_11:104774182-104777189:-|nuORF;nc|ENSG00000204403|Q6UXS9|CASP12;nc|ENSG00000196954|P49662-2|CASP4;ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104815482-104817977:-|nuORF	nc|ENSG00000204403|Q6UXS9-3|CASP12;nc|ENSG00000196954|P49662-2|CASP4	nc|ENSG00000196954|P49662-2|CASP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.2991210818291	2	614.296985	1226.57942	2.7969	0.0017181	1.0205	0.0006269	3.8174	0.002345	614.297599057387	72.522	0.39842	73.851	73.702	74.101	1.3297					27	12	3	0	0	0	0.18337	1	30443	30443		34.932	14.061	1	1481900			32341	4971;7978	15977	16043	37551	37551					-0.024810437403175456
SMTRYFYLF	9	Unmodified	_SMTRYFYLF_					0	0	0		nc|ENSG00000204403|Q6UXS9-3|CASP12;nc|ENSG00000204403|Q6UXS9-7|CASP12;nc|ENSG00000204403|Q6UXS9-5|CASP12;ENST00000531091.5_1_11:104774182-104777189:-|nuORF;nc|ENSG00000204403|Q6UXS9|CASP12;nc|ENSG00000196954|P49662-2|CASP4;ENSG00000196954|ENST00000444739|CASP4;ENST00000529565.1_1_11:104815482-104817977:-|nuORF	nc|ENSG00000204403|Q6UXS9-3|CASP12;nc|ENSG00000196954|P49662-2|CASP4	nc|ENSG00000196954|P49662-2|CASP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.2990600466728	2	614.296985	1226.57942	2.5579	0.0015713	0.019827	1.2179E-05	2.5777	0.0015835	614.2972467278821	71.998	0.32982	73.822	73.665	73.995	1.824					22	10	3	0	0	0	0.12216	2	30194	30194;30245		41.956	13.782	1	2091200			32342	4971;7978	15977	16043	37552;37553	37552					-0.024810437403175456
SMVDVVMLL	9	Unmodified	_SMVDVVMLL_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6;ENST00000462875.1_1_6:31609234-31609708:-|nuORF	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7713195681572	2	503.769214	1005.52388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.096	1	95.838	95.338	96.338	0.74124								0	0	0	0.049897	1	40008	40008		44.407	21.259	1				32343	5143	15978	16044	37554	37554					0.021334067477255303
SMVDVVMLL	9	Unmodified	_SMVDVVMLL_					0	0	0		nc|ENSG00000204463|P46379-5|BAG6;nc|ENSG00000204463|P46379-2|BAG6;nc|ENSG00000204463|P46379|BAG6;ENSG00000204463|ENST00000676615|BAG6;nc|ENSG00000204463|P46379-4|BAG6;ENST00000462875.1_1_6:31609234-31609708:-|nuORF	nc|ENSG00000204463|P46379-5|BAG6	nc|ENSG00000204463|P46379-5|BAG6	MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7700378298759	2	503.769214	1005.52388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.709	1	95.897	95.397	96.397	1.1887								0	0	0	0.24103	1	39845	39845		23.148	10.617	1				32344	5143	15978	16044	37555	37555					0.021334067477255303
SMVEDITGLRL	11	Unmodified	_SMVEDITGLRL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	617.3301879763603	2	617.329013	1232.64347	1.9633	0.001212	-1.0191	-0.00062914	0.94417	0.00058287	617.3285382665292	68.204	0.34663	68.204	68.012	68.359	0					23	10	3	0	0	0	0.094439	2	28379	28379;28433		57.108	35.571	1	1234300			32345	1196	15979	16045	37556;37557	37556					0.03645691625956715
SMVEDITGLRL	11	Unmodified	_SMVEDITGLRL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	617.3298217654228	2	617.329013	1232.64347	1.5894	0.0009812	-0.24818	-0.00015321	1.3413	0.00082799	617.3286850197529	67.678	0.34894	68	67.869	68.218	0.32268					24	10	3	0	0	0	0.058184	2	28370	28322;28370		64.927	35.086	1	1361400			32346	1196	15979	16045	37558;37559	37559					0.03645691625956715
SMVEDITGLRL	11	Unmodified	_SMVEDITGLRL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.3315917849541	2	617.329013	1232.64347	1.6498	0.0010184	2.9862	0.0018435	4.636	0.0028619	617.3310947531046	66.53	0.30769	67.919	67.782	68.089	1.3888					32	9	4	0	0	0	0.017927	2	27939	27891;27939		100.71	58.869	1	6596600			32347	1196	15979	16045	37560;37561	37561					0.03645691625956715
SMVEDITGLRL	11	Unmodified	_SMVEDITGLRL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP	nc|ENSG00000096696|P15924-2|DSP	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3307372927666	2	617.329013	1232.64347	1.4892	0.00091931	2.4198	0.0014938	3.9089	0.0024131	617.3307869334433	66.122	0.31092	68.011	67.839	68.15	1.8889					30	9	4	0	0	0	0.017927	2	27756	27709;27756		100.71	58.753	1	6033500			32348	1196	15979	16045	37562;37563	37563					0.03645691625956715
SMYDKVLML	9	Unmodified	_SMYDKVLML_					0	0	0		ENST00000485692.1_1_9:135919116-135919314:+|nuORF;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5	ENST00000485692.1_1_9:135919116-135919314:+|nuORF	ENST00000485692.1_1_9:135919116-135919314:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.2813598513603	2	550.279946	1098.54534	2.2686	0.0012484	0.12573	6.9185E-05	2.3944	0.0013176	550.2797674513749	59.589	0.43793	61.009	60.769	61.206	1.4196					31	13	3	0	0	0	0.087723	1	24966	24966		53.404	11.309	1	3179600			32349	3203	15980	16046	37564	37564					7.91776415098866E-06
SMYDKVLML	9	Unmodified	_SMYDKVLML_					0	0	0		ENST00000485692.1_1_9:135919116-135919314:+|nuORF;nc|ENSG00000148308|Q9Y5Q8-2|GTF3C5;ENSG00000148308|ENST00000372097|GTF3C5;nc|ENSG00000148308|Q9Y5Q8-3|GTF3C5	ENST00000485692.1_1_9:135919116-135919314:+|nuORF	ENST00000485692.1_1_9:135919116-135919314:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.2813598513603	2	550.279946	1098.54534	2.4663	0.0013571	0.15352	8.448E-05	2.6198	0.0014416	550.2798537543077	59.113	0.38024	61.082	60.876	61.256	1.969					26	11	3	0	0	0	0.087723	2	24783	24783;24839		53.404	9.5457	1	3415200			32350	3203	15980	16046	37565;37566	37565					7.91776415098866E-06
SNADDNGNSE	10	Unmodified	_SNADDNGNSE_					0	0	0			REV__ENSG00000152591|ENST00000651931|DSPP	REV__ENSG00000152591|ENST00000651931|DSPP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.6877014040947	2	511.686507	1021.35846	3.7978	0.0019433	-1.8131	-0.00092775	1.9847	0.0010155	511.6860396599328	72.976	0.50072	74.306	74.069	74.569	1.3298					95	15	9	0	0	0	0.84303	1	30593	30593		7.609	0.31972	1	26390000	+		32351	10427	15981	16047	37567	37567					-0.1513643725389784
SNAETNPA	8	Unmodified	_SNAETNPA_					0	0	0			REV__KIF20B|p.S506*|1|0.08|ENSG00000138182|chr10:89719500-89719501|AG/-|frameshift_variant	REV__KIF20B|p.S506*|1|0.08|ENSG00000138182|chr10:89719500-89719501|AG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1795532107353	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.06	1	101.24	100.74	101.74	0.18047								0	0	0	1.0178	1	42523	42523		2.3027	0	1		+		32352	10053	15982	16048	37568	37568					-0.06336803855481321
SNAETNPA	8	Unmodified	_SNAETNPA_					0	0	0			REV__KIF20B|p.S506*|1|0.08|ENSG00000138182|chr10:89719500-89719501|AG/-|frameshift_variant	REV__KIF20B|p.S506*|1|0.08|ENSG00000138182|chr10:89719500-89719501|AG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805908083916	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.98	1	101.18	100.68	101.68	0.20527								0	0	0	1.0178	1	42457	42457		2.3027	0	1		+		32353	10053	15982	16048	37569	37569					-0.06336803855481321
SNCAEPCSC	9	Unmodified	_SNCAEPCSC_					0	0	0		ENST00000591983.5_1_17:76130956-76133538:+|nuORF	ENST00000591983.5_1_17:76130956-76133538:+|nuORF	ENST00000591983.5_1_17:76130956-76133538:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	305.1003906130791	3	305.099801	912.277573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.032	1	50.362	49.862	50.862	0.33019								0	0	0	0.42693	1	20962	20962		0.26902	0	1				32354	7494	15983	16049	37570	37570					-0.18207456093648489
SNFRFRKREP	10	Unmodified	_SNFRFRKREP_					0	0	0			REV__ENST00000563680.1_1_16:30004959-30006553:-|nuORF	REV__ENST00000563680.1_1_16:30004959-30006553:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.8649780154228	2	668.865277	1335.716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.824	1	86.824	86.324	87.324	0								0	0	0	0.66176	1	36204	36204		1.4819	0	1		+		32355	10378	15984	16050	37571	37571					0.06157206534408033
SNFRRHIL	8	Unmodified	_SNFRRHIL_					0	0	0		nc|ENSG00000079134|Q96FV9-2|THOC1;ENST00000578529.5_1_18:214628-260326:-|nuORF;ENSG00000079134|ENST00000261600|THOC1	nc|ENSG00000079134|Q96FV9-2|THOC1	nc|ENSG00000079134|Q96FV9-2|THOC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2032043337822	3	348.201675	1041.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.123	1	86.282	85.782	86.782	1.159								0	0	0	1.0178	1	35720	35720		1.4819	0	1				32356	986	15985	16051	37572	37572					0.06406806868426429
SNGRLNPST	9	Unmodified	_SNGRLNPST_					0	0	0		TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	945.4781371951103	1	945.474834	944.467557	2.7861	0.0026342	0.61774	0.00058406	3.4039	0.0032183	945.4757403210795	104.79	0.073868	104.85	104.8	104.87	0.056808					7	3	3	0	0	0	0.72823	1	44283	44283		6.2058	2.6093	1	35097000			32357	16030	15986	16052	37573	37573					-0.006897617731056016
SNGRLNPST	9	Unmodified	_SNGRLNPST_					0	0	0		TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	TNRC6A|p.G355R|1|0.05|ENSG00000090905|chr16:24789705-24789705|G/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	945.474834	944.467557	3.4595	0.0032709	0.72482	0.0006853	4.1843	0.0039562	945.4759310123677	104.72	0.077225	104.89	104.85	104.92	0.1731	0.018605	-0.00020725	NaN	6.2058	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14427000			32358	16030	15986	16052							-0.006897617731056016
SNGRLTAQ	8	Unmodified	_SNGRLTAQ_					0	0	0		nc|ENSG00000211814|P0DPF4|TRAV35	nc|ENSG00000211814|P0DPF4|TRAV35	nc|ENSG00000211814|P0DPF4|TRAV35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	846.4427368044853	1	846.442806	845.435529	2.9404	0.0024889	-2.9943	-0.0025345	-0.053915	-4.5636E-05	846.4400629364452	104.77	0.11316	104.93	104.86	104.97	0.16055					20	5	5	0	0	0	0.89051	1	44447	44447		2.3027	0	1	1905599999.9999998			32359	7992	15987	16053	37574	37574					0.006628705437378812
SNGRLTAQ	8	Unmodified	_SNGRLTAQ_					0	0	0		nc|ENSG00000211814|P0DPF4|TRAV35	nc|ENSG00000211814|P0DPF4|TRAV35	nc|ENSG00000211814|P0DPF4|TRAV35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	846.4425536990166	1	846.442806	845.435529	3.0581	0.0025885	-2.9449	-0.0024927	0.11319	9.5811E-05	846.4400980665962	104.72	0.11627	104.89	104.82	104.94	0.1731					21	5	5	0	0	0	0.89051	1	44367	44367		2.3027	0	1	1277400000			32360	7992	15987	16053	37575	37575					0.006628705437378812
SNKKRLVFF	9	Unmodified	_SNKKRLVFF_					0	0	0			REV__ENSG00000164181|ENST00000508821|ELOVL7	REV__ENSG00000164181|ENST00000508821|ELOVL7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	379.8982116580009	3	380.229231	1137.66586	1.854	0.00070493	1.9856	0.00075499	3.8396	0.0014599	380.22918730938034	69.926	0.86707	71.28	70.717	71.584	1.3536					37	27	2	0	0	0	0.11909	1	29362	29362		2.4985	1.722	1	1125300	+		32361	10723	15988	16054	37576	37576					0.10253703876537656
SNKLRRHKRK	10	Unmodified	_SNKLRRHKRK_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	332.1705200076103	4	331.461456	1321.81672	0.62626	0.00020758	-2.2414	-0.00074294	-1.6152	-0.00053536	331.4604133311927	46.693	0.40794	48.068	47.803	48.211	1.3754					25	12	3	0	0	0	0.12561	1	19487	19487		0.13989	0	1	790680	+		32362	8606	15989	16055	37577	37577					0.16868283307894671
SNKLRRHKRK	10	Unmodified	_SNKLRRHKRK_					0	0	0			REV__ENSG00000046889|ENST00000288368|PREX2	REV__ENSG00000046889|ENST00000288368|PREX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	332.1704589724541	4	331.461456	1321.81672	0.77711	0.00025758	-2.5588	-0.00084816	-1.7817	-0.00059058	331.46044109325214	45.955	0.84627	47.926	47.218	48.064	1.9703					39	26	2	0	0	0	0.12561	1	19159	19159		0.13989	0	1	559250	+		32363	8606	15989	16055	37578	37578					0.16868283307894671
SNLAELLSL	9	Unmodified	_SNLAELLSL_					0	0	0			REV__tr|A0A7D6VU16|A0A7D6VU16_9CLOTDnaDdomainproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23745PE=4SV=1	REV__tr|A0A7D6VU16|A0A7D6VU16_9CLOTDnaDdomainproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23745PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	959.5471069216728	1	959.540788	958.533512	1.9101	0.0018329	-0.89429	-0.00085811	1.0159	0.00097475	959.5401936868443	62.598	0.30991	62.927	62.757	63.067	0.32974					16	9	2	0	0	0	0.20244	2	26264	26209;26264		32.786	0	1	554390	+		32364	15508	15990	16056	37579;37580	37580					0.052586343491157095
SNLILSNNINV	11	Unmodified	_SNLILSNNINV_					0	0	0		ENST00000259050.8_1_2:160625009-160625246:+|nuORF	ENST00000259050.8_1_2:160625009-160625246:+|nuORF	ENST00000259050.8_1_2:160625009-160625246:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8362304568291	2	600.832777	1199.651	3.0764	0.0018484	1.7148	0.0010303	4.7912	0.0028787	600.8343657102449	73.958	0.27237	75.754	75.597	75.869	1.7962					18	8	3	0	0	0	0.58511	1	31027	31027		21.59	0.053175	1	1301500			32365	5611	15991	16057	37581	37581					0.05916167217901602
SNNDDDED	8	Unmodified	_SNNDDDED_					0	0	0		ENSG00000102387|ENST00000356784|TAF7L;nc|ENSG00000102387|Q5H9L4|TAF7L	ENSG00000102387|ENST00000356784|TAF7L	ENSG00000102387|ENST00000356784|TAF7L	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.1466247439384	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.67	1	112.67	112.17	113.17	0								0	0	0	1.0178	1	48705	48705		0	0	1				32366	1390	15992	16058	37582	37582					-0.18543503927901384
SNNDDDED	8	Unmodified	_SNNDDDED_					0	0	0		ENSG00000102387|ENST00000356784|TAF7L;nc|ENSG00000102387|Q5H9L4|TAF7L	ENSG00000102387|ENST00000356784|TAF7L	ENSG00000102387|ENST00000356784|TAF7L	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1454040408134	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.161	1	59.579	59.079	60.079	1.4181								0	0	0	1.0178	1	24385	24385		0	0	1				32367	1390	15992	16058	37583	37583					-0.18543503927901384
SNNQMQQP	8	Unmodified	_SNNQMQQP_					0	0	0			REV__ENST00000559461.1_1_15:40475930-40477631:+|nuORF	REV__ENST00000559461.1_1_15:40475930-40477631:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.1400634646416	3	316.139753	945.397429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.938	1	96.938	96.438	97.438	0								0	0	0	1.0178	1	40525	40525		1.4819	0	1		+		32368	10529	15993	16059	37584	37584					-0.07745383433211828
SNPQSQAFKRQ	11	Unmodified	_SNPQSQAFKRQ_					0	0	0			REV__JARID2|p.F790Lfs*33|1|0.15|ENSG00000008083|chr6:15501331-15501331|C/-|frameshift_variant	REV__JARID2|p.F790Lfs*33|1|0.15|ENSG00000008083|chr6:15501331-15501331|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887206912041	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.547	1	25.547	25.047	26.047	0								0	0	0	0.63775	1	10662	10662		0.45452	0.1855	1		+		32369	8519	15994	16060	37585	37585					0.014409171639044871
SNRLQELKHK	10	Unmodified	_SNRLQELKHK_					0	0	0			REV__nc|ENSG00000136997|P01106-1|MYC	REV__nc|ENSG00000136997|P01106-1|MYC	MSMS	GG20161007_CRH_Patient100_A02_02	2	418.2451049685478	3	418.242199	1251.70477	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.234	1	89.458	88.958	89.958	0.22359								0	0	0	0.66218	1	37404	37404		0.77653	0.078866	1		+		32370	10007	15995	16061	37586	37586					0.08898384440249174
SNVFLLFI	8	Unmodified	_SNVFLLFI_					0	0	0		L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|124|1|anti-sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|124|1|anti-sense	L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|124|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.1999999880791	2	476.778754	951.542954	3.0177	0.0014388	-0.50825	-0.00024232	2.5094	0.0011964	476.77878580209017	65.374	0.33926	66.773	66.571	66.91	1.3989					17	10	2	0	0	0	2.3239	1	27392	27392		4.3292	0	1	1183700			32371	7701	15996	16062	37587	37587					0.06524447425283597
SNVRTTIHNYI	11	Unmodified	_SNVRTTIHNYI_					0	0	0			REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.3543578982353	2	659.349126	1316.6837	2.3074	0.0015214	1.2018	0.0007924	3.5092	0.0023138	659.3504726448444	75.638	0.37334	76.944	76.736	77.11	1.3063					29	11	3	0	0	0	0.66268	1	31717	31717		19.362	0	1	1712400	+		32372	8087	15997	16063	37588	37588					0.03802374340784809
SNVRTTIHNYI	11	Unmodified	_SNVRTTIHNYI_					0	0	0			REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.3498412966728	2	659.349126	1316.6837	2.645	0.001744	-0.083208	-5.4863E-05	2.5618	0.0016891	659.3492860132307	75.116	0.34076	76.898	76.699	77.04	1.7817					22	10	3	0	0	0	0.62604	1	31528	31528		20.415	0	1	2707000	+		32373	8087	15997	16063	37589	37589					0.03802374340784809
SNVRTTIHNYI	11	Unmodified	_SNVRTTIHNYI_					0	0	0			REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	REV__ENST00000508684.5_1_4:2877642-2900342:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	659.349126	1316.6837	2.3074	0.0015214	1.2018	0.0007924	3.5092	0.0023138	659.3504726448444	75.638	0.37334	76.944	76.736	77.11	1.3063	0.023122	0.0010199	NaN	20.415	29	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1712400	+		32374	8087	15997	16063							0.03802374340784809
SNVSISNIHYT	11	Unmodified	_SNVSISNIHYT_					0	0	0			REV__ENST00000490777.2_10:133754324-133769464:+|nuORF	REV__ENST00000490777.2_10:133754324-133769464:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	617.8052245974541	2	617.806759	1233.59897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.032	1	15.801	15.301	16.301	0.76937								0	0	0	0.63773	1	6246	6246		8.4443	0	1		+		32375	8748	15998	16064	37590	37590					-0.008489961958730419
SPADITILL	9	Unmodified	_SPADITILL_					0	0	0		ENST00000486023.1_1_21:47422428-47423924:+|nuORF;ENST00000498614.5_1_21:47421141-47423924:+|nuORF;ENSG00000142156|ENST00000361866|COL6A1	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.5519897341728	1	942.550625	941.543348	2.4174	0.0022786	-0.93463	-0.00088093	1.4828	0.0013976	942.5496010283753	76.819	0.4388	78.113	77.887	78.326	1.2938					24	13	2	0	0	0	0.031324	2	32221	32221;32270		85.357	24.967	1	3898300			32376	2983	15999	16065	37591;37592	37591					0.070238223544834
SPADITILL	9	Unmodified	_SPADITILL_					0	0	0		ENST00000486023.1_1_21:47422428-47423924:+|nuORF;ENST00000498614.5_1_21:47421141-47423924:+|nuORF;ENSG00000142156|ENST00000361866|COL6A1	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.7801696658134	2	471.778951	941.543348	2.7464	0.0012957	-0.6283	-0.00029642	2.1181	0.00099927	471.7789393460079	76.828	0.56628	78.122	77.792	78.359	1.2938					29	17	2	0	0	0	0.09539	1	32238	32238		50.855	0	1	2136900			32377	2983	15999	16065	37593	37593					0.070238223544834
SPADITILL	9	Unmodified	_SPADITILL_					0	0	0		ENST00000486023.1_1_21:47422428-47423924:+|nuORF;ENST00000498614.5_1_21:47421141-47423924:+|nuORF;ENSG00000142156|ENST00000361866|COL6A1	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	942.5511962771416	1	942.550625	941.543348	2.9481	0.0027787	-1.811	-0.001707	1.137	0.0010717	942.5489691749924	76.341	0.41269	78.108	77.909	78.321	1.7672					27	12	3	0	0	0	0.031324	2	32002	32002;32045		85.357	24.967	1	4376900			32378	2983	15999	16065	37594;37595	37594					0.070238223544834
SPADITILL	9	Unmodified	_SPADITILL_					0	0	0		ENST00000486023.1_1_21:47422428-47423924:+|nuORF;ENST00000498614.5_1_21:47421141-47423924:+|nuORF;ENSG00000142156|ENST00000361866|COL6A1	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	ENST00000486023.1_1_21:47422428-47423924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.7801696658134	2	471.778951	941.543348	3.0825	0.0014543	-0.47849	-0.00022574	2.604	0.0012285	471.7787606076431	76.408	0.44368	78.175	77.845	78.288	1.7672					23	13	2	0	0	0	0.09539	1	32061	32061		50.855	0	1	3029400			32379	2983	15999	16065	37596	37596					0.070238223544834
SPADLDECSC	10	Unmodified	_SPADLDECSC_					0	0	0		ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	ENSG00000175820|ENST00000322527|CCDC168	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.5845825076103	2	520.188982	1038.36341	0.84518	0.00043965	-0.17071	-8.8801E-05	0.67447	0.00035085	520.1880893117811	15.107	0.28038	15.107	14.905	15.186	0					13	8	2	0	0	0	0.12493	1	6302	6302		6.7232	6.2648	1	209220			32380	4386	16000	16066	37597	37597					-0.15423592707134048
SPAEELTK	8	Unmodified	_SPAEELTK_					0	0	0			REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7288390994072	2	437.729458	873.444362	0.17784	7.7847E-05	1.0386	0.00045463	1.2165	0.00053248	437.72982531127496	15.886	0.59006	15.886	15.591	16.181	0					34	18	2	0	0	0	0.69649	1	6542	6542		30.637	5.2372	1	2244700	+		32381	10963	16001	16067	37598	37598					0.002577993895670261
SPAEELTK	8	Unmodified	_SPAEELTK_					0	0	0			REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	REV__ROBO1|p.C1437Sfs*15|1|0.21|ENSG00000169855|chr3:78614773-78614774|-/TG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7302734255791	2	437.729458	873.444362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.316	1	16.143	15.643	16.643	0.82643								0	0	0	1.0178	1	6365	6365		19.257	2.3147	1		+		32382	10963	16001	16067	37599	37599					0.002577993895670261
SPAQAGPPD	9	Unmodified	_SPAQAGPPD_					0	0	0			REV__ENST00000006053.6_2_16:57417041-57417284:+|nuORF	REV__ENST00000006053.6_2_16:57417041-57417284:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	420.1990844607353	2	420.198325	838.382096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.73	1	102.91	102.41	103.41	0.18066								0	0	0	0.42693	1	43229	43229		4.3292	0	1		+		32383	12036	16002	16068	37600	37600					-0.04355926958760392
SPAVIPLSPKK	11	Unmodified	_SPAVIPLSPKK_					0	0	0		ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	ENSG00000196531|ENST00000454682|NACA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8560668826103	2	568.855524	1135.69649	2.489	0.0014159	-1.6576	-0.00094294	0.83143	0.00047296	568.8546024402528	88.257	0.81925	88.492	88.195	89.015	0.2347					82	25	5	0	0	0	1.0402	1	37020	37020		0	0	1	111350000			32384	4944	16003	16069	37601	37601					0.1340743747093711
SPCCCGDG	8	Unmodified	_SPCCCGDG_					0	0	0			REV__ENSG00000186965|ENST00000334055|KRTAP19-2	REV__ENSG00000186965|ENST00000334055|KRTAP19-2	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.1038390994072	2	371.103667	740.192781	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.569	1	98.825	98.325	99.325	0.25636								0	0	0	1.0178	1	41485	41485		0	0	1		+		32385	11519	16004	16070	37602	37602					-0.1877078183960066
SPCDSDHD	8	Unmodified	_SPCDSDHD_					0	0	0		ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.1444274783134	2	438.145432	874.276311	0.77471	0.00033943	-2.7351	-0.0011984	-1.9604	-0.00085892	438.14417205660476	100.74	0.14834	100.74	100.66	100.81	0					8	4	2	0	0	0	0.89198	1	42178	42178		0	0	1	3875700			32386	1288	16005	16071	37603	37603					-0.16585630866541123
SPCDSDHD	8	Unmodified	_SPCDSDHD_					0	0	0		ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	438.145432	874.276311	0.77471	0.00033943	-2.7351	-0.0011984	-1.9604	-0.00085892	438.14417205660476	100.74	0.14834	100.74	100.66	100.81	0	-0.00013581	0.00081293	NaN	0	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3875700			32387	1288	16005	16071							-0.16585630866541123
SPCDSDHD	8	Unmodified	_SPCDSDHD_					0	0	0		ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	438.145432	874.276311	3.1859	0.0013959	-4.9025	-0.002148	-1.7166	-0.00075213	438.1432036108864	100.69	0.15437	100.77	100.66	100.81	0.072716	0.028811	-0.0010864	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1121900			32388	1288	16005	16071							-0.16585630866541123
SPCDSDHD	8	Unmodified	_SPCDSDHD_					0	0	0		ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	438.145432	874.276311	3.4449	0.0015094	-2.8375	-0.0012432	0.60741	0.00026613	438.1443391777678	100.56	0.10879	100.74	100.68	100.79	0.18047	0.0064826	0.00072321	NaN	0	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1112900			32389	1288	16005	16071							-0.16585630866541123
SPCDSDHD	8	Unmodified	_SPCDSDHD_					0	0	0		ENST00000538571.6_1_14:58909433-59003756:+|nuORF;nc|ENSG00000100578|Q9BVV6-2|KIAA0586;nc|ENSG00000100578|Q9BVV6-4|KIAA0586;nc|ENSG00000100578|Q9BVV6|KIAA0586;ENSG00000100578|ENST00000652326|KIAA0586;nc|ENSG00000100578|Q9BVV6-3|KIAA0586	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	ENST00000538571.6_1_14:58909433-59003756:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	438.145432	874.276311	3.3468	0.0014664	-2.6092	-0.0011432	0.73761	0.00032318	438.1440697750244	100.5	0.12007	100.7	100.6	100.72	0.20527	-0.035158	0.00092322	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	890970			32390	1288	16005	16071							-0.16585630866541123
SPCEGPED	8	Unmodified	_SPCEGPED_					0	0	0			REV__ENST00000453643.5_3_22:43389626-43411079:-|nuORF	REV__ENST00000453643.5_3_22:43389626-43411079:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	417.1543151736259	2	417.152726	832.290898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.58	1	102.58	102.08	103.08	0								0	0	0	1.0178	1	42989	42989		2.3027	1.5091	1		+		32391	13152	16006	16072	37604	37604					-0.1319555871839384
SPCEGPED	8	Unmodified	_SPCEGPED_					0	0	0			REV__ENST00000453643.5_3_22:43389626-43411079:-|nuORF	REV__ENST00000453643.5_3_22:43389626-43411079:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	417.1543762087822	2	417.152726	832.290898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.37	1	102.43	101.93	102.93	0.062805								0	0	0	1.0178	1	42878	42878		2.5775	0	1		+		32392	13152	16006	16072	37605	37605					-0.1319555871839384
SPCGGGGC	8	Unmodified	_SPCGGGGC_					0	0	0		ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	319.1043273806572	2	319.107067	636.199581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6069	1	3.6069	3.1069	4.1069	0								0	0	0	1.0178	1	1481	1481		0	0	1				32393	7499	16007	16073	37606	37606					-0.13307100896724933
SPCGGGGC	8	Unmodified	_SPCGGGGC_					0	0	0		ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	319.1048766970634	2	319.107067	636.199581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7188	1	3.7188	3.2188	4.2188	0								0	0	0	1.0178	1	1527	1527		0	0	1				32394	7499	16007	16073	37607	37607					-0.13307100896724933
SPCGGGGC	8	Unmodified	_SPCGGGGC_					0	0	0		ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	ENST00000593012.1_1_19:2272861-2273104:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	319.1039611697197	2	319.107067	636.199581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6218	1	5.6218	5.1218	6.1218	0								0	0	0	1.0178	1	2309	2309		0	0	1				32395	7499	16007	16073	37608	37608					-0.13307100896724933
SPCHGDGC	8	Unmodified	_SPCHGDGC_					0	0	0			REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1300231814384	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.324	1	96.324	95.824	96.824	0								0	0	0	1.0178	1	40268	40268		0	0	1		+		32396	14112	16008	16074	37609	37609					-0.15364330839281592
SPCHGDGC	8	Unmodified	_SPCHGDGC_					0	0	0			REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.1267578005791	2	388.128531	774.242508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.72	1	115.72	115.22	116.22	0								0	0	0	1.0178	1	49934	49934		0	0	1		+		32397	14112	16008	16074	37610	37610					-0.15364330839281592
SPCHGDGC	8	Unmodified	_SPCHGDGC_					0	0	0			REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.1299316287041	2	388.128531	774.242508	1.8359	0.00071258	1.8553	0.0007201	3.6912	0.0014327	388.12886238219454	75.885	1.6679	77.179	76.787	78.455	1.2938					71	53	3	0	0	0	0.89198	1	32316	32316		0	0	1	1500200	+		32398	14112	16008	16074	37611	37611					-0.15364330839281592
SPCHGDGC	8	Unmodified	_SPCHGDGC_					0	0	0			REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	REV__ENST00000599244.5_2_19:35225081-35225894:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1522704958916	2	388.128531	774.242508	2.5281	0.00098124	1.352	0.00052477	3.8802	0.001506	388.1284313603509	75.561	1.3453	77.343	76.42	77.765	1.7817					58	43	2	0	0	0	2.3239	1	31845	31845		0	0	1	1004200	+		32399	14112	16008	16074	37612	37612					-0.15364330839281592
SPCPGPDP	8	Unmodified	_SPCPGPDP_					0	0	0			REV__ZNF831|p.P17Rfs*83|1|0.11|ENSG00000124203|chr20:59191068-59191069|-/GAGA|frameshift_variant	REV__ZNF831|p.P17Rfs*83|1|0.11|ENSG00000124203|chr20:59191068-59191069|-/GAGA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1632263064384	2	385.162896	768.31124	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.57	1	102.74	102.24	103.24	0.16445								0	0	0	1.0178	1	43189	43189		5.2307	0	1		+		32400	15945	16009	16075	37613	37613					-0.08218343267935779
SPCPSSCC	8	Unmodified	_SPCPSSCC_					0	0	0			REV__ENST00000393965.7_1_2:74701806-74702394:-|nuORF	REV__ENST00000393965.7_1_2:74701806-74702394:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2852355837822	2	392.127142	782.239731	0.059446	2.3311E-05	-1.3007	-0.00051002	-1.2412	-0.00048671	392.12544176839157	76.841	0.15779	76.841	76.782	76.94	0					6	4	2	0	0	0	2.3239	1	31975	31975		0	0	1	311090	+		32401	12821	16010	16076	37614	37614					-0.16009922288458256
SPDDLDFRL	9	Unmodified	_SPDDLDFRL_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2643310427666	2	539.264196	1076.51384	0.89448	0.00048236	2.0745	0.0011187	2.969	0.0016011	539.2657442479408	52.962	0.32152	54.363	54.184	54.506	1.4005					17	9	2	0	0	0	0.11606	1	22128	22128		43.982	3.7426	1	2073100			32402	2893	16011	16077	37615	37615					-0.021357416616638147
SPDDLDFRL	9	Unmodified	_SPDDLDFRL_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3;nc|ENSG00000139734|Q9NSV4-2|DIAPH3;nc|ENSG00000139734|Q9NSV4-1|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	539.264196	1076.51384	1.3504	0.00072822	0.35702	0.00019253	1.7074	0.00092075	539.2646650156105	52.391	0.25111	54.363	54.228	54.48	1.9722	0.00031208	-0.00053967	NaN	43.982	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1247100			32403	2893	16011	16077							-0.021357416616638147
SPDEFSNDF	9	Unmodified	_SPDEFSNDF_					0	0	0		nc|ENSG00000064012|Q14790-5|CASP8	nc|ENSG00000064012|Q14790-5|CASP8	nc|ENSG00000064012|Q14790-5|CASP8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.7573119997978	2	529.209086	1056.40362	2.5621	0.0013559	0.33841	0.00017909	2.9005	0.001535	529.209393352603	77.041	0.41381	78.322	78.124	78.538	1.2809					21	12	2	0	0	0	0.10844	1	32353	32353		16.942	6.1184	1	467910			32404	7827	16012	16078	37616	37616					-0.1223258672071097
SPDHTIILL	9	Unmodified	_SPDHTIILL_					0	0	0		nc|ENSG00000188167|Q6ZT21-2|TMPPE;ENSG00000188167|ENST00000342462|TMPPE	nc|ENSG00000188167|Q6ZT21-2|TMPPE	nc|ENSG00000188167|Q6ZT21-2|TMPPE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7917053103447	2	504.78985	1007.56515	1.3036	0.00065803	0.90462	0.00045664	2.2082	0.0011147	504.7903377623838	52.171	0.40548	53.568	53.368	53.774	1.3966					30	12	3	0	0	0	0.069258	1	21802	21802		60.39	6.814	1	5122200			32405	4851	16013	16079	37617	37617					0.06166627103061728
SPDPQIIVV	9	Unmodified	_SPDPQIIVV_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.2776977419853	2	484.276575	966.538597	1.7592	0.00085195	0.70792	0.00034283	2.4671	0.0011948	484.2767524989083	54.597	0.53252	56.002	55.739	56.272	1.4048					50	16	4	0	0	0	0.1388	3	22843	22798;22843;22883		39.95	7.3864	1	8546400			32406	184	16014	16080	37618;37619;37620	37619					0.05398938211715176
SPDPQIIVV	9	Unmodified	_SPDPQIIVV_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	967.5511962771416	1	967.545874	966.538597	1.2296	0.0011897	2.6847	0.0025975	3.9143	0.0037872	967.5479468753507	54.639	0.34756	56.044	55.835	56.182	1.4048					24	10	3	0	0	0	0.007852	2	22871	22826;22871		111.29	56.513	1	3691000			32407	184	16014	16080	37621;37622	37622					0.05398938211715176
SPDPQIIVV	9	Unmodified	_SPDPQIIVV_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.2777587771416	2	484.276575	966.538597	1.6297	0.00078923	1.0058	0.00048708	2.6355	0.0012763	484.2767608399012	54.131	0.53446	56.099	55.814	56.348	1.9684					58	16	5	0	0	0	0.086433	3	22672	22622;22672;22712		53.833	21.527	1	9859800			32408	184	16014	16080	37623;37624;37625	37624					0.05398938211715176
SPDPQIIVV	9	Unmodified	_SPDPQIIVV_					0	0	0		nc|ENSG00000167244|P01344-3|IGF2;chr11:2140299-2140857|211|50.04|0.31|7.33|-|ENST00000434045|IGF2,IGF2	nc|ENSG00000167244|P01344-3|IGF2	nc|ENSG00000167244|P01344-3|IGF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	967.5531494021416	1	967.545874	966.538597	1.6488	0.0015953	3.1237	0.0030223	4.7725	0.0046176	967.5496491065675	54.209	0.37947	56.177	55.908	56.287	1.9684					21	11	2	0	0	0	0.019432	2	22662	22662;22717		99.799	61.825	1	2690000			32409	184	16014	16080	37626;37627	37626					0.05398938211715176
SPDVAKSK	8	Unmodified	_SPDVAKSK_					0	0	0		DMRT3|p.G188C|1|0.53|ENSG00000064218|chr9:990148-990148|G/T|missense_variant;ENSG00000064218|ENST00000190165|DMRT3	DMRT3|p.G188C|1|0.53|ENSG00000064218|chr9:990148-990148|G/T|missense_variant	DMRT3|p.G188C|1|0.53|ENSG00000064218|chr9:990148-990148|G/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2318603396416	2	416.232168	830.449782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.922	1	27.922	27.422	28.422	0								0	0	0	1.0178	1	11682	11682		2.5775	0	1				32410	412	16015	16081	37628	37628					0.027775229720418793
SPEEVTELVL	10	Unmodified	_SPEEVTELVL_					0	0	0		nc|ENSG00000143401|Q9BTT0-2|ANP32E;ENSG00000143401|ENST00000583931|ANP32E	nc|ENSG00000143401|Q9BTT0-2|ANP32E	nc|ENSG00000143401|Q9BTT0-2|ANP32E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2972289919853	2	558.295162	1114.57577	3.1743	0.0017722	2.8077	0.0015676	5.982	0.0033397	558.2973047936475	64.466	0.92664	65.874	65.622	66.548	1.4071					81	29	4	0	0	0	0.35292	2	27155	27155;27207		36.127	14.38	1	16934000			32411	3030	16016	16082	37629;37630	37629					0.023065649668069454
SPEKLQETAM	10	Unmodified	_SPEKLQETAM_					0	0	0		CON__ENSEMBL:ENSBTAP00000007350	CON__ENSEMBL:ENSBTAP00000007350	CON__ENSEMBL:ENSBTAP00000007350	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2787353396416	2	567.278989	1132.54342	0.91263	0.00051771	-0.8933	-0.00050675	0.019323	1.0961E-05	567.2784557648017	53.341	0.66143	54.741	54.41	55.072	1.4005					94	27	4	0	0	0	0.47063	1	22404	22404		29.082	4.0906	1	132130000		+	32412	326	16017	16083	37631	37631					-0.01754545707831312
SPELELQVL	9	Unmodified	_SPELELQVL_					0	0	0		nc|ENSG00000150337|P12314-2|FCGR1A;ENSG00000150337|ENST00000369168|FCGR1A	nc|ENSG00000150337|P12314-2|FCGR1A	nc|ENSG00000150337|P12314-2|FCGR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2892333865166	2	514.28714	1026.55973	2.7941	0.001437	0.57498	0.00029571	3.3691	0.0017327	514.2874846950403	77.23	0.51015	78.511	78.217	78.728	1.2809					39	15	3	0	0	0	0.093059	1	32454	32454		57.471	15.377	1	4604100			32413	3265	16018	16084	37632	37632					0.04750903520562133
SPELRIAKM	9	Unmodified	_SPELRIAKM_					0	0	0			REV__ENST00000594883.1_1_19:57687347-57687830:+|nuORF	REV__ENST00000594883.1_1_19:57687347-57687830:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.9920532107353	2	522.797152	1043.57975	1.6756	0.00087599	-2.2708	-0.0011872	-0.5952	-0.00031117	522.796182237758	42.399	0.37412	44.32	44.041	44.416	1.9211					24	11	3	0	0	0	0.11719	1	17713	17713		3.9444	0	1	3308000	+		32414	14089	16019	16085	37633	37633					0.05970375979518394
SPENVIQLL	9	Unmodified	_SPENVIQLL_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;nc|ENSG00000101158|Q8IXH7-3|NELFCD;ENST00000482747.1_1_20:57556337-57564148:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7893554568291	2	506.787307	1011.56006	3.335	0.0016902	3.8594	0.0019559	7.1944	0.003646	506.78923980303574	72.542	0.70778	73.871	73.58	74.288	1.3297					52	22	3	0	0	0	0.0058174	3	30436	30390;30436;30487		118.89	29.494	1	8199400			32415	1324	16020	16086	37634;37635;37636	37635					0.054743232404462105
SPENVIQLL	9	Unmodified	_SPENVIQLL_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;nc|ENSG00000101158|Q8IXH7-3|NELFCD;ENST00000482747.1_1_20:57556337-57564148:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7886840701103	2	506.787307	1011.56006	2.7409	0.001389	4.022	0.0020383	6.7628	0.0034273	506.78903914014563	72.065	0.64149	73.888	73.634	74.275	1.824					53	20	3	0	0	0	0.019432	1	30227	30227		99.799	24.87	1	11345000			32416	1324	16020	16086	37637	37637					0.054743232404462105
SPEQDRLLWF	10	Unmodified	_SPEQDRLLWF_					0	0	0		chr8:143018247-143020883|199|49.11|0.42|6.85|+|2|LY6E,LY6E|1	chr8:143018247-143020883|199|49.11|0.42|6.85|+|2|LY6E,LY6E|1	chr8:143018247-143020883|199|49.11|0.42|6.85|+|2|LY6E,LY6E|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880493044853	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.727	1	9.3635	8.8635	9.8635	0.63651								0	0	0	0.66255	1	3623	3623		0.13989	0	1				32417	287	16021	16087	37638	37638					0.0072018456346540916
SPESLLDIAA	10	Unmodified	_SPESLLDIAA_					0	0	0		ENSG00000130449|ENST00000252744|ZSWIM6	ENSG00000130449|ENST00000252744|ZSWIM6	ENSG00000130449|ENST00000252744|ZSWIM6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	508.2951843142509	2	508.268947	1014.52334	2.8846	0.0014661	-1.5015	-0.00076316	1.3831	0.00070299	508.26704414536005	61.836	0.40834	63.793	63.53	63.938	1.9571					25	12	3	0	0	0	0.11554	1	25993	25993		43.858	3.901	1	1970500			32418	2436	16022	16088	37639	37639					0.01666026623865946
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7499877810478	2	539.74765	1077.48075	4.2683	0.0023038	0.16803	9.0694E-05	4.4363	0.0023945	539.747782548708	92.234	0.51565	93.17	92.893	93.408	0.93623					36	15	3	0	0	0	0.013238	3	38847	38794;38847;38898		104.8	50.402	1	5108800			32419	1553	16023	16089	37640;37641;37642	37641					-0.05489323713709382
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1078.493701159954	1	1078.48802	1077.48075	4.2563	0.0045904	0.82327	0.00088789	5.0796	0.0054783	1078.4908898417746	92.226	0.25728	93.162	93.019	93.276	0.93623					13	7	2	0	0	0	0.026628	1	38834	38834		92.822	67.423	1	2972000			32420	1553	16023	16089	37643	37643					-0.05489323713709382
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7510253787041	2	539.74765	1077.48075	3.36	0.0018136	0.74413	0.00040164	4.1042	0.0022152	539.7480373243224	91.775	0.44814	93.101	92.893	93.341	1.3269					34	13	3	0	0	0	0.031324	3	38611	38611;38657;38699		85.357	53.24	1	6361100			32421	1553	16023	16089	37644;37645;37646	37644					-0.05489323713709382
SPFEFGFTF	9	Unmodified	_SPFEFGFTF_					0	0	0		ENST00000485817.1_1_3:125063303-125063474:-|nuORF;ENST00000488001.5_1_7:157151266-157161444:+|nuORF;ENST00000526843.2_1_11:127810983-127811547:-|nuORF;nc|ENSG00000105993|O75190-2|DNAJB6;nc|ENSG00000105993|O75190-4|DNAJB6;nc|ENSG00000105993|O75190-3|DNAJB6;ENSG00000105993|ENST00000262177|DNAJB6	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	ENST00000485817.1_1_3:125063303-125063474:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1078.502490222454	1	1078.48802	1077.48075	3.5496	0.0038282	-1.6277	-0.0017555	1.9218	0.0020727	1078.484998979992	91.743	0.28802	93.07	92.956	93.244	1.3269					13	8	2	0	0	0	0.018723	2	38628	38628;38675		100.37	71.29	1	2168800			32422	1553	16023	16089	37647;37648	37647					-0.05489323713709382
SPFHLQLEF	9	Unmodified	_SPFHLQLEF_					0	0	0		C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant;nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant	C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2880737185478	2	559.287474	1116.5604	2.3533	0.0013162	-0.56547	-0.00031626	1.7878	0.0009999	559.2873530639296	69.538	0.3381	70.904	70.758	71.096	1.3657					23	10	3	0	0	0	0.037098	2	29214	29170;29214		78.728	42.601	1	3519000			32423	109	16024	16090	37649;37650	37650					0.006777429603062046
SPFHLQLEF	9	Unmodified	_SPFHLQLEF_					0	0	0		C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant;nc|ENSG00000157617|Q9Y426-2|C2CD2;nc|ENSG00000157617|Q9Y426-3|C2CD2;ENSG00000157617|ENST00000380486|C2CD2	C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant	C2CD2|p.A203Dfs*23|1|0.05|ENSG00000157617|chr21:41918217-41918218|-/AGGCCCCTGGGAAGCCCCCCAGACAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2889892458916	2	559.287474	1116.5604	1.2154	0.00067976	-0.095898	-5.3635E-05	1.1195	0.00062613	559.2879687827428	68.984	0.45173	70.837	70.558	71.009	1.853					23	14	2	0	0	0	0.1109	2	28966	28920;28966		45.7	18.816	1	3168900			32424	109	16024	16090	37651;37652	37652					0.006777429603062046
SPFLFPIFEA	10	Unmodified	_SPFLFPIFEA_					0	0	0			REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3104125857353	2	584.307875	1166.6012	4.0775	0.0023825	0.17875	0.00010445	4.2563	0.002487	584.3080068388373	94.796	0.44669	95.537	95.325	95.771	0.74123					45	14	5	0	0	0	0.5476	3	39879	39842;39879;39918		25.399	6.1423	1	26365000	+		32425	13341	16025	16091	37653;37654;37655	37654					0.024560842799019156
SPFLFPIFEA	10	Unmodified	_SPFLFPIFEA_					0	0	0			REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3097411990166	2	584.307875	1166.6012	3.2066	0.0018737	-0.30148	-0.00017616	2.9052	0.0016975	584.3076148907123	94.446	0.50162	95.635	95.302	95.803	1.1887					44	15	4	0	0	0	0.5476	1	39723	39723		25.399	6.1423	1	18255000	+		32426	13341	16025	16091	37656	37656					0.024560842799019156
SPFLFPIFEA	10	Unmodified	_SPFLFPIFEA_					0	0	0			REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	584.307875	1166.6012	4.0775	0.0023825	0.17875	0.00010445	4.2563	0.002487	584.3080068388373	94.796	0.44669	95.537	95.325	95.771	0.74123	-0.048973	0.00027943	NaN	25.399	45	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26365000	+		32427	13341	16025	16091							0.024560842799019156
SPFLFPIFEA	10	Unmodified	_SPFLFPIFEA_					0	0	0			REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	REV__ENST00000479861.5_1_1:159842277-159843134:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	584.307875	1166.6012	3.2066	0.0018737	-0.30148	-0.00017616	2.9052	0.0016975	584.3076148907123	94.446	0.50162	95.635	95.302	95.803	1.1887	0.048973	-0.00028178	NaN	25.399	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18255000	+		32428	13341	16025	16091							0.024560842799019156
SPFRGFGG	8	Unmodified	_SPFRGFGG_					0	0	0		ENST00000397512.7_1_11:703653-703983:+|nuORF;ENST00000492023.1_1_11:700162-703983:+|nuORF	ENST00000397512.7_1_11:703653-703983:+|nuORF	ENST00000397512.7_1_11:703653-703983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	824.4097778201103	1	824.404963	823.397687	2.9808	0.0024574	1.5795	0.0013022	4.5603	0.0037595	824.4073241608083	104.78	0.11034	104.94	104.88	104.99	0.16679					10	5	3	0	0	0	0.89198	1	44426	44426		0	0	1	33770000			32429	6313	16026	16092	37657	37657					-0.02107595651034444
SPGCSGPP	8	Unmodified	_SPGCSGPP_					0	0	0			REV__ENST00000513775.1_1_4:44680541-44682717:+|nuORF	REV__ENST00000513775.1_1_4:44680541-44682717:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	351.2378723025322	2	351.149789	700.285025	-1.1515	-0.00040436	-1.444	-0.00050706	-2.5955	-0.00091142	351.14936924824667	94.657	0.67583	94.657	94.307	94.983	0					56	21	4	0	0	0	2.3239	1	39450	39450		0	0	1	5278900	+		32430	13588	16027	16093	37658	37658					-0.07710612439416309
SPGPGGPG	8	Unmodified	_SPGPGGPG_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	625.2946655154228	1	625.294016	624.28674	1.5362	0.00096056	-0.67778	-0.00042381	0.85839	0.00053675	625.2935164424049	104.8	0.10905	104.8	104.74	104.85	0					14	5	3	0	0	0	0.89198	1	44314	44314		0	0	1	278180000			32431	1523	16028	16094	37659	37659					-0.04043235359142727
SPGPGGPG	8	Unmodified	_SPGPGGPG_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	625.2947875857353	1	625.294016	624.28674	2.6521	0.0016583	-1.3377	-0.00083646	1.3144	0.00082187	625.2930587983025	104.75	0.12889	104.81	104.72	104.85	0.056801					17	6	4	0	0	0	0.89198	1	44243	44243		0	0	1	294750000			32432	1523	16028	16094	37660	37660					-0.04043235359142727
SPGPGGPG	8	Unmodified	_SPGPGGPG_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.2948486208916	1	625.294016	624.28674	2.8718	0.0017957	-0.70299	-0.00043958	2.1688	0.0013562	625.2934751180755	104.71	0.13081	104.87	104.77	104.9	0.16055					14	6	3	0	0	0	0.89198	1	44420	44420		0	0	1	246710000			32433	1523	16028	16094	37661	37661					-0.04043235359142727
SPGPGGPG	8	Unmodified	_SPGPGGPG_					0	0	0		nc|ENSG00000105520|Q96GM1-2|PLPPR2;ENSG00000105520|ENST00000688289|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	nc|ENSG00000105520|Q96GM1-2|PLPPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.2942993044853	1	625.294016	624.28674	2.6984	0.0016873	-1.7033	-0.0010651	0.99504	0.00062219	625.2928267055124	104.64	0.13056	104.82	104.75	104.88	0.1731					14	6	3	0	0	0	0.89198	1	44319	44319		0	0	1	127520000			32434	1523	16028	16094	37662	37662					-0.04043235359142727
SPHCPTNFY	9	Unmodified	_SPHCPTNFY_					0	0	0		ENST00000517951.5_1_5:156822576-156936463:-|nuORF;ENSG00000135074|ENST00000257527|ADAM19;nc|ENSG00000135074|Q9H013|ADAM19	ENST00000517951.5_1_5:156822576-156936463:-|nuORF	ENST00000517951.5_1_5:156822576-156936463:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2280761599541	2	533.226559	1064.43857	1.4515	0.00077399	0.43871	0.00023393	1.8902	0.0010079	533.2270991481937	67.199	0.7404	69.088	68.797	69.538	1.8889					144	23	9	0	0	0	0.70108	1	28261	28261		7.2892	0	1	85987000			32435	2647	16029	16095	37663	37663					-0.09107622393730708
SPHSPLCIE	9	Unmodified	_SPHSPLCIE_					0	0	0		ENST00000518942.1_1_8:52811897-52811990:+|nuORF	ENST00000518942.1_1_8:52811897-52811990:+|nuORF	ENST00000518942.1_1_8:52811897-52811990:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2486144900322	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.28	109.78	110.78	0.15228								0	0	0	0.42693	1	47768	47768		0.26902	0	1				32436	7063	16030	16096	37664	37664					-0.03250451733947557
SPIKKVKSLHK	11	Unmodified	_SPIKKVKSLHK_					0	0	0			REV__MEPE|p.N339Tfs*73|1|0.09|ENSG00000152595|chr4:87845883-87845883|A/-|frameshift_variant	REV__MEPE|p.N339Tfs*73|1|0.09|ENSG00000152595|chr4:87845883-87845883|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2775756716728	3	422.27484	1263.80269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.04	1	99.121	98.621	99.621	0.080376								0	0	0	0.63775	1	41464	41464		0.40827	0	1		+		32437	10428	16031	16097	37665	37665					0.18134193036257784
SPILTSSTL	9	Unmodified	_SPILTSSTL_					0	0	0		ENST00000544327.1_1_12:125284722-125292339:-|nuORF	ENST00000544327.1_1_12:125284722-125292339:-|nuORF	ENST00000544327.1_1_12:125284722-125292339:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5179321169853	1	918.514239	917.506963	2.2915	0.0021048	0.74545	0.0006847	3.037	0.0027895	918.5150215389808	59.203	0.3326	60.623	60.436	60.769	1.4196					19	10	2	0	0	0	0.026628	2	24847	24796;24847		92.822	25.478	1	2044800			32438	7229	16032	16098	37666;37667	37667					0.04490945457757789
SPILTSSTL	9	Unmodified	_SPILTSSTL_					0	0	0		ENST00000544327.1_1_12:125284722-125292339:-|nuORF	ENST00000544327.1_1_12:125284722-125292339:-|nuORF	ENST00000544327.1_1_12:125284722-125292339:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.5186035037041	1	918.514239	917.506963	2.0893	0.001919	0.8625	0.00079222	2.9518	0.0027113	918.5145361248923	58.7	0.32738	60.669	60.487	60.814	1.969					16	10	2	0	0	0	0.042029	2	24644	24592;24644		74.423	16.951	1	2076100			32439	7229	16032	16098	37668;37669	37669					0.04490945457757789
SPLATATLL	9	Unmodified	_SPLATATLL_					0	0	0		ENST00000494126.6_1_5:177638946-177649471:-|nuORF;ENST00000481436.5_1_5:177642388-177652501:-|nuORF	ENST00000494126.6_1_5:177638946-177649471:-|nuORF	ENST00000494126.6_1_5:177638946-177649471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	886.5275146365166	1	886.52441	885.517133	2.7724	0.0024578	-1.2536	-0.0011114	1.5187	0.0013464	886.5239373817188	61.743	0.22166	63.161	63.081	63.303	1.4177					9	6	2	0	0	0	0.46905	1	25906	25906		16.942	0	1	468080			32440	6824	16033	16099	37670	37670					0.06979553183009557
SPLKKKPPLA	10	Unmodified	_SPLKKKPPLA_					0	0	0			REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	REV__nc|ENSG00000100095|Q9BYH1-5|SEZ6L	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2396118044853	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.091	1	95.214	94.714	95.714	0.12331								0	0	0	0.66254	1	39792	39792		0.15932	0	1		+		32441	8965	16034	16100	37671	37671					0.15527758679127146
SPLSTAYLL	9	Unmodified	_SPLSTAYLL_					0	0	0			REV__ENSG00000100036|ENST00000343605|SLC35E4	REV__ENSG00000100036|ENST00000343605|SLC35E4	MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7702514529228	2	482.771126	963.527698	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.436	1	78.203	77.703	78.703	1.7672								0	0	0	0.27791	1	32067	32067		20.454	0	1		+		32442	8963	16035	16101	37672	37672					0.04447535837425676
SPNAEIHIL	9	Unmodified	_SPNAEIHIL_					0	0	0		ENST00000565736.1_1_16:29814793-29815446:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22;ENSG00000079616|ENST00000160827|KIF22	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2724792361259	2	497.271824	992.529095	1.9806	0.00098491	-0.86281	-0.00042905	1.1178	0.00055586	497.2713087822269	38.829	0.40724	40.125	39.943	40.35	1.2961					32	12	3	0	0	0	3.1987E-07	2	16331	16291;16331		191.38	102.48	1	10113000			32443	994	16036	16102	37673;37674	37674					0.03253169926199462
SPNAEIHIL	9	Unmodified	_SPNAEIHIL_					0	0	0		ENST00000565736.1_1_16:29814793-29815446:+|nuORF;nc|ENSG00000079616|Q14807-2|KIF22;ENSG00000079616|ENST00000160827|KIF22	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	ENST00000565736.1_1_16:29814793-29815446:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2726623415947	2	497.271824	992.529095	0.94293	0.00046889	0.42704	0.00021235	1.37	0.00068125	497.2720872976156	38.262	0.43872	40.083	39.848	40.287	1.8202					36	13	4	0	0	0	2.6268E-07	3	16066	16016;16066;16112		193.29	89.546	1	9832600			32444	994	16036	16102	37675;37676;37677	37676					0.03253169926199462
SPNEFYFTV	9	Unmodified	_SPNEFYFTV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2578613162041	2	552.25584	1102.49713	1.688	0.00093222	0.7847	0.00043336	2.4727	0.0013656	552.256715248303	67.426	0.49017	68.804	68.575	69.065	1.3778					25	15	2	0	0	0	0.28372	1	28324	28324		26.268	5.8536	1	2225800			32445	4569	16037	16103	37678	37678					-0.05002242547629976
SPNEFYFTV	9	Unmodified	_SPNEFYFTV_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.25584	1102.49713	1.2626	0.00069725	2.3189	0.0012806	3.5814	0.0019779	552.2569776967545	66.85	0.58089	68.739	68.467	69.048	1.8889	-0.032782	0.00099474	NaN	26.268	44	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1592800			32446	4569	16037	16103							-0.05002242547629976
SPNHLYLVM	9	Unmodified	_SPNHLYLVM_					0	0	0		ENST00000487696.1_1_10:12391817-12708810:+|nuORF;nc|ENSG00000183049|Q8IU85-2|CAMK1D;ENSG00000183049|ENST00000619168|CAMK1D	ENST00000487696.1_1_10:12391817-12708810:+|nuORF	ENST00000487696.1_1_10:12391817-12708810:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2754394412041	2	537.276052	1072.53755	1.8607	0.00099972	-1.4267	-0.00076652	0.43403	0.00023319	537.2749695388648	46.399	0.59301	47.775	47.586	48.179	1.3751					39	18	3	0	0	0	0.28372	2	19421	19421;19472		26.268	3.5319	1	2062500			32447	4637	16038	16104	37679;37680	37679					0.004184005711522332
SPNHLYLVM	9	Unmodified	_SPNHLYLVM_					0	0	0		ENST00000487696.1_1_10:12391817-12708810:+|nuORF;nc|ENSG00000183049|Q8IU85-2|CAMK1D;ENSG00000183049|ENST00000619168|CAMK1D	ENST00000487696.1_1_10:12391817-12708810:+|nuORF	ENST00000487696.1_1_10:12391817-12708810:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2757446169853	2	537.276052	1072.53755	1.433	0.00076993	-1.5438	-0.00082943	-0.11074	-5.9496E-05	537.2749312378108	45.927	0.55516	47.897	47.695	48.251	1.9703					32	17	2	0	0	0	0.28372	2	19207	19207;19260		26.268	0.97554	1	2053000			32448	4637	16038	16104	37681;37682	37681					0.004184005711522332
SPPGSHPVR	9	Unmodified	_SPPGSHPVR_					0	0	0		SVA_D_dup912|chr11:73935626-73937666:-|1.861451030615439|0.3832838640500095|2.28|429.0|40|3|sense	SVA_D_dup912|chr11:73935626-73937666:-|1.861451030615439|0.3832838640500095|2.28|429.0|40|3|sense	SVA_D_dup912|chr11:73935626-73937666:-|1.861451030615439|0.3832838640500095|2.28|429.0|40|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.2496826052666	2	467.248683	932.482814	3.2917	0.0015381	-4.1041	-0.0019176	-0.81233	-0.00037956	467.24838291684046	87.052	0.42531	87.296	87.102	87.527	0.24387					88	16	6	0	0	0	0.71526	1	36572	36572		6.7232	0	1	106960000			32449	16016	16039	16105	37683	37683					0.013871498147523198
SPPSCCCP	8	Unmodified	_SPPSCCCP_					0	0	0		ENST00000467312.1_1_9:131483560-131485040:-|nuORF	ENST00000467312.1_1_9:131483560-131485040:-|nuORF	ENST00000467312.1_1_9:131483560-131485040:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	397.3095275759697	2	397.13751	792.260466	3.0916	0.0012278	4.2404	0.001684	7.3321	0.0029118	397.13898762539316	100.52	0.12193	100.73	100.63	100.75	0.20526					5	3	2	0	0	0	2.3239	1	42236	42236		0	0	1	741460			32450	6710	16040	16106	37684	37684					-0.1439733190879906
SPQDFGLVL	9	Unmodified	_SPQDFGLVL_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2620727419853	2	488.260925	974.507297	3.1034	0.0015153	-0.96224	-0.00046982	2.1411	0.0010454	488.26039604306334	70.633	0.41672	71.986	71.744	72.161	1.3536					36	12	4	0	0	0	0.031145	3	29628	29586;29628;29669		85.642	29.464	1	9232700			32451	2513	16041	16107	37685;37686;37687	37686					0.01902365177613774
SPQDFGLVL	9	Unmodified	_SPQDFGLVL_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	975.5155517458916	1	975.514573	974.507297	3.0692	0.0029941	-0.82586	-0.00080563	2.2434	0.0021884	975.5120805757532	70.605	0.44743	71.958	71.744	72.191	1.3536					26	13	3	0	0	0	0.036104	1	29645	29645		79.596	33.897	1	4529000			32452	2513	16041	16107	37688	37688					0.01902365177613774
SPQDFGLVL	9	Unmodified	_SPQDFGLVL_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2612182497978	2	488.260925	974.507297	2.318	0.0011318	-1.1864	-0.00057928	1.1316	0.0005525	488.2602233008291	70.124	0.47865	71.962	71.719	72.198	1.8378					41	14	4	0	0	0	0.031145	3	29418	29369;29418;29459		85.642	29.464	1	7292600			32453	2513	16041	16107	37689;37690;37691	37690					0.01902365177613774
SPQDFGLVL	9	Unmodified	_SPQDFGLVL_					0	0	0		nc|ENSG00000132128|Q15345-3|LRRC41;ENSG00000132128|ENST00000617190|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	nc|ENSG00000132128|Q15345-3|LRRC41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	975.5175048708916	1	975.514573	974.507297	2.0954	0.0020441	-1.5776	-0.0015389	0.51784	0.00050516	975.5114488007731	70.156	0.57158	71.994	71.719	72.291	1.8378					24	17	2	0	0	0	0.019486	2	29437	29384;29437		99.755	37.183	1	1886000			32454	2513	16041	16107	37692;37693	37693					0.01902365177613774
SPQDHTSLL	9	Unmodified	_SPQDHTSLL_					0	0	0			REV__ENSG00000160469|ENST00000309383|BRSK1	REV__ENSG00000160469|ENST00000309383|BRSK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.2496215701103	2	499.251089	996.487624	2.1623	0.0010795	-1.7768	-0.00088708	0.38549	0.00019246	499.249133097491	70.132	0.41698	71.97	71.687	72.104	1.8378					21	12	3	0	0	0	0.28863	1	29401	29401		27.629	3.6082	1	1092200	+		32455	10604	16042	16108	37694	37694					-0.010760108331282936
SPQDHTSLL	9	Unmodified	_SPQDHTSLL_					0	0	0			REV__ENSG00000160469|ENST00000309383|BRSK1	REV__ENSG00000160469|ENST00000309383|BRSK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	499.251089	996.487624	3.0055	0.0015005	-2.8742	-0.0014349	0.13132	6.5562E-05	499.24848578451906	70.567	0.32318	71.921	71.775	72.098	1.3536	-0.024785	-0.00054947	NaN	27.629	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1316000	+		32456	10604	16042	16108							-0.010760108331282936
SPQDHTSLL	9	Unmodified	_SPQDHTSLL_					0	0	0			REV__ENSG00000160469|ENST00000309383|BRSK1	REV__ENSG00000160469|ENST00000309383|BRSK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	499.251089	996.487624	2.1623	0.0010795	-1.7768	-0.00088708	0.38549	0.00019246	499.249133097491	70.132	0.41698	71.97	71.687	72.104	1.8378	0.024785	0.00054625	NaN	27.629	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1092200	+		32457	10604	16042	16108							-0.010760108331282936
SPQEFIHEL	9	Unmodified	_SPQEFIHEL_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2186157107353	2	550.274564	1098.53457	2.0021	0.0011017	-0.02706	-1.489E-05	1.975	0.0010868	550.274428420154	45.421	0.45153	46.787	46.53	46.982	1.3653					26	13	3	0	0	0	0.11518	1	19019	19019		11.64	3.7301	1	1076400			32458	2893	16043	16109	37695	37695					-0.010751512820206699
SPQEFIHEL	9	Unmodified	_SPQEFIHEL_					0	0	0		nc|ENSG00000139734|Q9NSV4-7|DIAPH3;nc|ENSG00000139734|Q9NSV4-6|DIAPH3;nc|ENSG00000139734|Q9NSV4-5|DIAPH3;nc|ENSG00000139734|Q9NSV4-4|DIAPH3;ENSG00000139734|ENST00000400324|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	nc|ENSG00000139734|Q9NSV4-7|DIAPH3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2187988162041	2	550.274564	1098.53457	1.8411	0.0010131	-0.43321	-0.00023838	1.4079	0.00077475	550.2738874768012	44.863	0.44557	46.822	46.544	46.99	1.9596					26	13	3	0	0	0	0.11684	1	18704	18704		1.8442	0.51471	1	768950			32459	2893	16043	16109	37696	37696					-0.010751512820206699
SPQEMPLRVI	10	Unmodified	_SPQEMPLRVI_					0	0	0			REV__ENST00000478188.5_1_4:57891702-57896440:+|nuORF	REV__ENST00000478188.5_1_4:57891702-57896440:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3239623904228	2	585.320991	1168.62743	2.2964	0.0013441	-3.4819	-0.002038	-1.1855	-0.0006939	585.3206973965184	44.222	0.28594	45.576	45.377	45.663	1.3536					17	8	3	0	0	0	0.76954	1	18526	18526		15.248	3.0078	1	923180	+		32460	13324	16044	16110	37697	37697					0.04986030179725276
SPQPKKRG	8	Unmodified	_SPQPKKRG_					0	0	0			REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	449.2673217654228	2	449.266876	896.519199	1.6238	0.00072951	0.1852	8.3203E-05	1.809	0.00081272	449.2669508801014	73.169	1.0505	73.169	72.684	73.734	0					80	33	3	0	0	0	0.89008	1	30343	30343		2.5775	0	1	2611200	+		32461	11408	16045	16111	37698	37698					0.06680026711478604
SPQPKKRG	8	Unmodified	_SPQPKKRG_					0	0	0			REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	449.266876	896.519199	1.6238	0.00072951	0.1852	8.3203E-05	1.809	0.00081272	449.2669508801014	73.169	1.0505	73.169	72.684	73.734	0	-0.099759	0.0003765	NaN	2.5775	80	33	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2611200	+		32462	11408	16045	16111							0.06680026711478604
SPQPKKRG	8	Unmodified	_SPQPKKRG_					0	0	0			REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	REV__nc|ENSG00000183977|A8MPX8-2|PP2D1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	449.266876	896.519199	2.2839	0.0010261	-0.864	-0.00038817	1.4199	0.00063793	449.26739278537156	72.027	0.77338	73.368	73.03	73.803	1.3415	0.099759	-0.00056624	NaN	2.5775	52	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622830	+		32463	11408	16045	16111							0.06680026711478604
SPRFSTLTL	9	Unmodified	_SPRFSTLTL_					0	0	0		ENST00000549623.1_3_12:57916784-57918763:+|nuORF;ENST00000548887.5_3_12:57918090-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1963989138603	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.604	1	90.813	90.313	91.313	0.20904								0	0	0	0.42693	1	37965	37965		0.96228	0	1				32464	7252	16046	16112	37699	37699					0.050937429602981865
SPRFSTLTL	9	Unmodified	_SPRFSTLTL_					0	0	0		ENST00000549623.1_3_12:57916784-57918763:+|nuORF;ENST00000548887.5_3_12:57918090-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1966125369072	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.737	1	90.946	90.446	91.446	0.20904								0	0	0	0.42693	1	38019	38019		0.96228	0	1				32465	7252	16046	16112	37700	37700					0.050937429602981865
SPRFSTLTL	9	Unmodified	_SPRFSTLTL_					0	0	0		ENST00000549623.1_3_12:57916784-57918763:+|nuORF;ENST00000548887.5_3_12:57918090-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	ENST00000549623.1_3_12:57916784-57918763:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1956054568291	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.149	1	91.339	90.839	91.839	0.19042								0	0	0	0.42693	1	38184	38184		0.96228	0	1				32466	7252	16046	16112	37701	37701					0.050937429602981865
SPRLPRQRP	9	Unmodified	_SPRLPRQRP_					0	0	0		ENST00000397420.7_1_11:838599-838812:+|nuORF	ENST00000397420.7_1_11:838599-838812:+|nuORF	ENST00000397420.7_1_11:838599-838812:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8314697146416	2	553.830706	1105.64686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.373	1	70.739	70.239	71.239	1.3657								0	0	0	0.41514	1	29117	29117		7.2892	0.56607	1				32467	6311	16047	16113	37702	37702					0.09826167305527633
SPRLTLVLID	10	Unmodified	_SPRLTLVLID_					0	0	0		ENST00000527285.1_1_11:18728401-18728901:+|nuORF	ENST00000527285.1_1_11:18728401-18728901:+|nuORF	ENST00000527285.1_1_11:18728401-18728901:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2335693240166	3	376.23253	1125.67576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.613	1	90.613	90.113	91.113	0								0	0	0	0.66227	1	37873	37873		0.62683	0	1				32468	7134	16048	16114	37703	37703					0.11794847091277916
SPRPKAVTP	9	Unmodified	_SPRPKAVTP_					0	0	0		nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;ENSG00000169129|ENST00000304129|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1921874880791	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.14	1	103.19	102.69	103.69	0.059723								0	0	0	0.42693	1	43224	43224		1.0715	0.67075	1				32469	4070	16049	16115	37704	37704					0.07245180025711306
SPRPKAVTP	9	Unmodified	_SPRPKAVTP_					0	0	0		nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;ENSG00000169129|ENST00000304129|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1918212771416	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.91	1	104.96	104.46	105.46	0.056801								0	0	0	0.42693	1	44361	44361		1.0715	0.29493	1				32470	4070	16049	16115	37705	37705					0.07245180025711306
SPRPKAVTP	9	Unmodified	_SPRPKAVTP_					0	0	0		nc|ENSG00000169129|Q8N4X5-3|AFAP1L2;ENST00000491814.1_1_10:116056685-116061337:-|nuORF;ENSG00000169129|ENST00000304129|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	nc|ENSG00000169129|Q8N4X5-3|AFAP1L2	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1913940310478	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.87	1	105.03	104.53	105.53	0.15859								0	0	0	0.42693	1	44546	44546		1.0715	0.29493	1				32471	4070	16049	16115	37706	37706					0.07245180025711306
SPRPRRLERA	10	Unmodified	_SPRPRRLERA_					0	0	0			REV__ENST00000584106.1_1_17:37026345-37026510:+|nuORF	REV__ENST00000584106.1_1_17:37026345-37026510:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2476074099541	3	413.246055	1236.71634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.51	1	104.57	104.07	105.07	0.056801								0	0	0	0.66176	1	44089	44089		0.62683	0	1		+		32472	14008	16050	16116	37707	37707					0.10744626254290779
SPRRGRPALP	10	Unmodified	_SPRRGRPALP_					0	0	0		nc|ENSG00000115266|O95996-2|APC2;nc|ENSG00000115266|O95996-3|APC2;ENSG00000115266|ENST00000590469|APC2	nc|ENSG00000115266|O95996-2|APC2	nc|ENSG00000115266|O95996-2|APC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8361694216728	2	553.830706	1105.64686	1.3456	0.00074524	1.3918	0.00077085	2.7375	0.0015161	553.8311677973015	68.823	0.82233	70.676	70.346	71.168	1.853					49	26	2	0	0	0	0.82019	1	28855	28855		10.074	2.7847	1	1890400			32473	1907	16051	16117	37708	37708					0.09826167305527633
SPRRLKLNV	9	Unmodified	_SPRRLKLNV_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.8453857302666	2	541.843282	1081.67201	1.0358	0.00056124	1.953	0.0010582	2.9888	0.0016195	541.844382282284	107.61	0.23496	107.61	107.45	107.68	0					28	11	4	0	0	0	0.7849	1	46154	46154		3.9444	2.1002	1	44587000	+		32474	11402	16052	16118	37709	37709					0.1344422210806897
SPRRLKLNV	9	Unmodified	_SPRRLKLNV_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	541.843282	1081.67201	1.0358	0.00056124	1.953	0.0010582	2.9888	0.0016195	541.844382282284	107.61	0.23496	107.61	107.45	107.68	0	-0.046428	0.0018281	NaN	3.9444	28	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44587000	+		32475	11402	16052	16118							0.1344422210806897
SPRRRHGN	8	Unmodified	_SPRRRHGN_					0	0	0		ENST00000580296.5_3_17:80416248-80417251:+|nuORF	ENST00000580296.5_3_17:80416248-80417251:+|nuORF	ENST00000580296.5_3_17:80416248-80417251:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.1812927126884	3	327.181274	978.521993	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.134	1	96.134	95.634	96.634	0								0	0	0	1.0178	1	40191	40191		0.40072	0	1				32476	7431	16053	16119	37710	37710					0.031872948889940744
SPRSPPLFPLV	11	Unmodified	_SPRSPPLFPLV_					0	0	0			REV__ENST00000467586.5_1_17:74084367-74085867:-|nuORF	REV__ENST00000467586.5_1_17:74084367-74085867:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3535644412041	2	605.353148	1208.69174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.35	1	104.51	104.01	105.01	0.16055								0	0	0	0.63775	1	44177	44177		2.9952	0	1		+		32477	13248	16054	16120	37711	37711					0.09574553328161528
SPRSRARIAI	10	Unmodified	_SPRSRARIAI_					0	0	0		chr8:144103225-144104417|273|14.85|0.43|5.12|-|1|SHARPIN,None|1	chr8:144103225-144104417|273|14.85|0.43|5.12|-|1|SHARPIN,None|1	chr8:144103225-144104417|273|14.85|0.43|5.12|-|1|SHARPIN,None|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2342101931572	3	376.231634	1125.67307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.877	1	89.933	89.433	90.433	1.0562								0	0	0	0.66161	1	37463	37463		1.7423	0.28716	1				32478	290	16055	16121	37712	37712					0.11526436476970048
SPRVGGFG	8	Unmodified	_SPRVGGFG_					0	0	0		ENST00000472073.1_1_22:19121711-19131632:-|nuORF;ENSG00000100056|ENST00000252137|ESS2	ENST00000472073.1_1_22:19121711-19131632:-|nuORF	ENST00000472073.1_1_22:19121711-19131632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	776.4092895388603	1	776.404963	775.397687	2.7405	0.0021277	3.7754	0.0029312	6.5158	0.0050589	776.407614348482	100.13	0.13036	100.2	100.12	100.25	0.072716					5	3	2	0	0	0	0.8873	1	41928	41928		4.3292	0	1	3091000			32479	1233	16056	16122	37713	37713					0.0010040434897291561
SPSEILQEL	9	Unmodified	_SPSEILQEL_					0	0	0		nc|ENSG00000115419|O94925-3|GLS;ENSG00000115419|ENST00000320717|GLS;nc|ENSG00000115419|O94925-2|GLS;ENST00000479552.1_1_2:191745810-191759998:+|nuORF;ENST00000496170.1_1_2:191745882-191760452:+|nuORF	nc|ENSG00000115419|O94925-3|GLS	nc|ENSG00000115419|O94925-3|GLS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.2953674197197	2	508.268947	1014.52334	3.2448	0.0016492	-1.1679	-0.0005936	2.0769	0.0010556	508.2670271281566	62.397	0.40634	63.815	63.556	63.963	1.4177					30	12	3	0	0	0	0.047433	1	26217	26217		48.346	8.3885	1	2731300			32480	1918	16057	16123	37714	37714					0.01666026623865946
SPSTSIFFI	9	Unmodified	_SPSTSIFFI_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	998.5234863162041	1	998.519325	997.512048	2.0845	0.0020814	-1.662	-0.0016596	0.42244	0.00042182	998.5191776049528	70.422	0.18293	72.259	72.136	72.319	1.8378					9	5	2	0	0	0	0.09539	1	29532	29532		50.855	0	1	849350			32481	4838	16058	16124	37715	37715					0.013192493203860067
SPSTSIFFI	9	Unmodified	_SPSTSIFFI_					0	0	0		ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	ENSG00000187775|ENST00000389840|DNAH17	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	998.519325	997.512048	3.7902	0.0037845	0.48684	0.00048612	4.277	0.0042707	998.5194777008579	70.885	0.21606	72.238	72.129	72.345	1.3536	-0.010581	0.00051141	NaN	50.855	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1167400			32482	4838	16058	16124							0.013192493203860067
SPSVLVVEL	9	Unmodified	_SPSVLVVEL_					0	0	0		nc|ENSG00000196116|Q8NHU6-2|TDRD7;TDRD7|p.Q1006Dfs*30|1|0.14|ENSG00000196116|chr9:97487271-97487272|-/GATT|frameshift_variant;ENSG00000196116|ENST00000355295|TDRD7	nc|ENSG00000196116|Q8NHU6-2|TDRD7	nc|ENSG00000196116|Q8NHU6-2|TDRD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	942.5555297732353	1	942.550625	941.543348	2.7133	0.0025574	2.5807	0.0024324	5.294	0.0049898	942.5510334532768	70.225	0.3131	71.578	71.366	71.679	1.3536					14	9	2	0	0	0	0.066815	1	29441	29441		61.357	10.502	1	2000900			32483	4914	16059	16125	37716	37716					0.070238223544834
SPSVLVVEL	9	Unmodified	_SPSVLVVEL_					0	0	0		nc|ENSG00000196116|Q8NHU6-2|TDRD7;TDRD7|p.Q1006Dfs*30|1|0.14|ENSG00000196116|chr9:97487271-97487272|-/GATT|frameshift_variant;ENSG00000196116|ENST00000355295|TDRD7	nc|ENSG00000196116|Q8NHU6-2|TDRD7	nc|ENSG00000196116|Q8NHU6-2|TDRD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	942.5533935427666	1	942.550625	941.543348	2.9499	0.0027804	-0.67281	-0.00063415	2.2771	0.0021463	942.5495679717355	69.709	0.28316	71.546	71.372	71.656	1.8378					15	8	2	0	0	0	0.0075027	2	29233	29233;29282		112.59	23.166	1	1726400			32484	4914	16059	16125	37717;37718	37717					0.070238223544834
SPTKLDVTL	9	Unmodified	_SPTKLDVTL_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2830993533134	2	487.281857	972.549162	0.28217	0.0001375	2.0324	0.00099035	2.3146	0.0011278	487.28287845362195	36.506	0.29124	37.783	37.653	37.945	1.2762					21	13	2	0	0	0	0.066197	2	15309	15309;15349		61.602	9.4601	1	2523200			32485	682	16060	16126	37719;37720	37719					0.06178920866148019
SPTKLDVTL	9	Unmodified	_SPTKLDVTL_					0	0	0		nc|ENSG00000047849|P27816-5|MAP4;nc|ENSG00000047849|P27816-2|MAP4;nc|ENSG00000047849|P27816-6|MAP4;nc|ENSG00000047849|P27816|MAP4;ENSG00000047849|ENST00000683076|MAP4	nc|ENSG00000047849|P27816-5|MAP4	nc|ENSG00000047849|P27816-5|MAP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2823669314384	2	487.281857	972.549162	0.77068	0.00037554	0.52549	0.00025606	1.2962	0.0006316	487.28176876870566	35.962	0.2289	37.78	37.664	37.893	1.8176					17	10	2	0	0	0	0.050451	1	15065	15065		67.838	13.065	1	2503600			32486	682	16060	16126	37721	37721					0.06178920866148019
SPTPLPPSLL	10	Unmodified	_SPTPLPPSLL_					0	0	0			REV__ENST00000532383.5_1_11:10828794-10828950:-|nuORF	REV__ENST00000532383.5_1_11:10828794-10828950:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3019592165947	2	511.30005	1020.58555	2.5775	0.0013179	2.3973	0.0012258	4.9748	0.0025436	511.30121048789744	68.032	0.3684	69.902	69.611	69.979	1.87					20	11	2	0	0	0	0.5476	1	28511	28511		25.399	3.6527	1	3533500	+		32487	13720	16061	16127	37722	37722					0.07607797762852897
SPVDGSVTI	9	Unmodified	_SPVDGSVTI_					0	0	0			REV__tr|A0A7D6VP53|A0A7D6VP53_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17300PE=4SV=1	REV__tr|A0A7D6VP53|A0A7D6VP53_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7304565310478	2	437.729458	873.444362	0.051074	2.2357E-05	2.9958	0.0013113	3.0468	0.0013337	437.7307417535526	13.026	0.33968	13.026	12.869	13.208	0					16	10	2	0	0	0	0.13873	1	5395	5395		39.957	0	1	628610	+		32488	15349	16062	16128	37723	37723					0.0025779938957839477
SPVGTLLLDL	10	Unmodified	_SPVGTLLLDL_					0	0	0		nc|ENSG00000189184|Q9HCL0-2|PCDH18;ENSG00000189184|ENST00000344876|PCDH18	nc|ENSG00000189184|Q9HCL0-2|PCDH18	nc|ENSG00000189184|Q9HCL0-2|PCDH18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3052856326103	2	514.305332	1026.59611	1.1457	0.00058924	-0.30103	-0.00015482	0.84468	0.00043442	514.3050226922186	52.678	0.63393	54.075	53.836	54.469	1.3966					53	19	3	0	0	0	0.057925	1	22079	22079		92.491	5.2332	1	12139000			32489	4899	16063	16129	37724	37724					0.08387780417297108
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	336.1907836794853	2	336.189771	670.36499	0.35793	0.00012033	2.4672	0.00082946	2.8252	0.00094979	336.1903348702973	25.682	0.27707	25.934	25.767	26.044	0.25197					21	8	3	0	0	0	0.89176	1	10750	10750		0.79363	0	1	3695100	+		32490	12378	16064	16130	37725	37725					0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	336.1899597048759	2	336.189771	670.36499	0.37171	0.00012497	0.74518	0.00025052	1.1169	0.00037549	336.18969534534136	25.946	0.24132	26.198	26.044	26.285	0.25197					19	7	3	0	0	0	0.89176	1	10847	10847		0.79363	0	1	3733300	+		32491	12378	16064	16130	37726	37726					0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1903869509697	2	336.189771	670.36499	-0.64563	-0.00021705	2.8266	0.00095029	2.181	0.00073323	336.1907621775436	18.451	0.19325	19.43	19.312	19.506	0.97922					12	7	2	0	0	0	0.89176	1	7698	7698		0.79363	0	1	783840	+		32492	12378	16064	16130	37727	37727					0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1899291872978	2	336.189771	670.36499	0.13685	4.6008E-05	0.77217	0.00025959	0.90902	0.0003056	336.1899119732355	24.651	0.26778	25.892	25.732	26	1.241					19	8	3	0	0	0	0.89176	1	10336	10336		0.79363	0	1	3733100	+		32493	12378	16064	16130	37728	37728					0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1900207400322	2	336.189771	670.36499	0.11195	3.7638E-05	0.3913	0.00013155	0.50325	0.00016919	336.18970003461055	24.911	0.26745	26.164	26.012	26.28	1.253					21	8	3	0	0	0	0.89176	1	10408	10408		0.79363	0	1	3233000	+		32494	12378	16064	16130	37729	37729					0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	336.189771	670.36499	-2.6187	-0.00088037	5.8675	0.0019726	3.2488	0.0010922	336.19163057243827	19.484	0.18663	19.484	19.386	19.572	0	0.063197	0.0013751	NaN	0.79363	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907250	+		32495	12378	16064	16130							0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	336.189771	670.36499	0.37171	0.00012497	0.74518	0.00025052	1.1169	0.00037549	336.18969534534136	25.946	0.24132	26.198	26.044	26.285	0.25197	-0.017194	0.0003657	NaN	0.79363	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3733300	+		32496	12378	16064	16130							0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	336.189771	670.36499	0.0057585	1.936E-06	5.0994	0.0017144	5.1052	0.0017163	336.1907878363798	19.138	0.27521	19.331	19.201	19.476	0.19342	-0.08991	0.00085863	NaN	0.79363	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	985700	+		32497	12378	16064	16130							0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	336.189771	670.36499	0.11195	3.7638E-05	0.3913	0.00013155	0.50325	0.00016919	336.18970003461055	24.911	0.26745	26.164	26.012	26.28	1.253	-0.050962	0.00012776	NaN	0.79363	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3233000	+		32498	12378	16064	16130							0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	336.189771	670.36499	-0.64563	-0.00021705	2.8266	0.00095029	2.181	0.00073323	336.1907621775436	18.451	0.19325	19.43	19.312	19.506	0.97922	0.0087997	-0.00066953	NaN	0.79363	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	783840	+		32499	12378	16064	16130							0.016621972261077644
SPVLAAGG	8	Unmodified	_SPVLAAGG_					0	0	0			REV__ENST00000313766.5_7:193098-193146:+|nuORF	REV__ENST00000313766.5_7:193098-193146:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	336.189771	670.36499	-0.19353	-6.5063E-05	3.7504	0.0012608	3.5569	0.0011958	336.1909252839735	17.991	0.14604	19.439	19.346	19.492	1.448	0.017913	-4.8408E-05	NaN	0.79363	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	878900	+		32500	12378	16064	16130							0.016621972261077644
SPVLVRILLR	10	Unmodified	_SPVLVRILLR_					0	0	0		ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3926269412041	2	583.392608	1164.77066	3.0996	0.0018083	-2.6583	-0.0015508	0.44132	0.00025746	583.3910828794753	107.48	0.22772	107.63	107.51	107.73	0.15781					45	11	5	0	0	0	0.89803	1	46251	46251		0.40072	0.050084	1	1213200000			32501	5467	16065	16131	37730	37730					0.19486825353124004
SPVLVRILLR	10	Unmodified	_SPVLVRILLR_					0	0	0		ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	ENSG00000276231|ENST00000619866|PIK3R6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3926269412041	2	583.392608	1164.77066	3.1727	0.0018509	-2.857	-0.0016667	0.31574	0.0001842	583.3910198683096	107.43	0.26781	107.59	107.45	107.72	0.15795					45	13	5	0	0	0	0.89803	1	46198	46198		0.40072	0.40072	1	600510000			32502	5467	16065	16131	37731	37731					0.19486825353124004
SPVRLDIRNCY	11	Unmodified	_SPVRLDIRNCY_					0	0	0			REV__nc|ENSG00000135503|P36896-2|ACVR1B	REV__nc|ENSG00000135503|P36896-2|ACVR1B	MSMS	GG20161007_CRH_Patient100_W632_01	3	668.3442260622978	2	668.345529	1334.6765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.53	1	103.7	103.2	104.2	0.16445								0	0	0	0.63775	1	43660	43660		2.4985	0.84587	1		+		32503	9943	16066	16132	37732	37732					0.022553184687012617
SPVSGTWLL	9	Unmodified	_SPVSGTWLL_					0	0	0		ENST00000264864.7_1_4:25235715-25235748:+|nuORF	ENST00000264864.7_1_4:25235715-25235748:+|nuORF	ENST00000264864.7_1_4:25235715-25235748:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	959.5209838747978	1	959.519659	958.512382	2.2155	0.0021258	1.7868	0.0017144	4.0023	0.0038403	959.5193305556079	70.885	0.27825	72.238	72.098	72.376	1.3536					15	8	2	0	0	0	0.031324	1	29754	29754		85.357	43.262	1	1973800			32504	5653	16067	16133	37733	37733					0.031466690402339736
SPVSGTWLL	9	Unmodified	_SPVSGTWLL_					0	0	0		ENST00000264864.7_1_4:25235715-25235748:+|nuORF	ENST00000264864.7_1_4:25235715-25235748:+|nuORF	ENST00000264864.7_1_4:25235715-25235748:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	959.5197021365166	1	959.519659	958.512382	1.8355	0.0017612	0.43564	0.000418	2.2711	0.0021792	959.5196073876222	70.406	0.27574	72.244	72.073	72.349	1.8378					14	8	2	0	0	0	0.042029	1	29519	29519		74.423	32.328	1	1545000			32505	5653	16067	16133	37734	37734					0.031466690402339736
SPVTPRAPK	9	Unmodified	_SPVTPRAPK_					0	0	0			REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	317.8787414431572	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.719	1	27.99	27.49	28.49	0.27119								0	0	0	0.42693	1	11591	11591		0.86438	0	1		+		32506	10463	16068	16134	37735	37735					0.07245180025699938
SPVTPRAPK	9	Unmodified	_SPVTPRAPK_					0	0	0			REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1920349001884	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.002	1	68.324	67.824	68.824	0.32269								0	0	0	0.42693	1	28467	28467		0.86438	0	1		+		32507	10463	16068	16134	37736	37736					0.07245180025699938
SPVTPRAPK	9	Unmodified	_SPVTPRAPK_					0	0	0			REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	REV__ENST00000460261.5_1_1:52822810-52825784:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	317.8781005740166	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.875	1	28.147	27.647	28.647	1.2715								0	0	0	0.42693	1	11256	11256		1.0715	0	1		+		32508	10463	16068	16134	37737	37737					0.07245180025699938
SPWKPGRR	8	Unmodified	_SPWKPGRR_					0	0	0		ENST00000200457.8_1_7:100465531-100466124:+|nuORF;nc|ENSG00000087077|Q15654-3|TRIP6;nc|ENSG00000087077|Q15654-2|TRIP6	ENST00000200457.8_1_7:100465531-100466124:+|nuORF	ENST00000200457.8_1_7:100465531-100466124:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.2812377810478	2	492.280318	982.546083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.89	1	91.89	91.39	92.39	0								0	0	0	1.0178	1	38399	38399		0.69038	0	1				32509	5508	16069	16135	37738	37738					0.054111353226630854
SQAKIEHAAA	10	Unmodified	_SQAKIEHAAA_					0	0	0		ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	513.8066284060478	2	513.272355	1024.53016	2.2546	0.0011572	2.3217	0.0011917	4.5763	0.0023489	513.2738384641685	81.538	0.47495	81.538	81.319	81.794	0					24	15	2	0	0	0	0.12529	1	34005	34005		6.2058	4.3615	1	3987600			32510	5460	16070	16136	37739	37739					0.018873842950824837
SQAKIEHAAA	10	Unmodified	_SQAKIEHAAA_					0	0	0		ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	ENSG00000275342|ENST00000615670|PRAG1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	513.8052856326103	2	513.272355	1024.53016	2.2013	0.0011299	1.4705	0.00075476	3.6718	0.0018847	513.2733756361498	81.373	0.3907	81.663	81.431	81.822	0.29056					20	12	2	0	0	0	0.125	1	33995	33995		10.074	1.3285	1	4673100			32511	5460	16070	16136	37740	37740					0.018873842950824837
SQALKEHLK	9	Unmodified	_SQALKEHLK_					0	0	0		ZNF142|p.L757Sfs*16|1|0.05|ENSG00000115568|chr2:218644247-218644248|-/AATAAGTGGCATTCATAAAAGCAGA|frameshift_variant;ZNF142|p.S904Tfs*73|1|0.05|ENSG00000115568|chr2:218643805-218643806|GA/-|frameshift_variant;ENST00000433921.5_1_2:219503064-219516433:-|nuORF;nc|ENSG00000115568|P52746|ZNF142;ENSG00000115568|ENST00000411696|ZNF142	ZNF142|p.L757Sfs*16|1|0.05|ENSG00000115568|chr2:218644247-218644248|-/AATAAGTGGCATTCATAAAAGCAGA|frameshift_variant	ZNF142|p.L757Sfs*16|1|0.05|ENSG00000115568|chr2:218644247-218644248|-/AATAAGTGGCATTCATAAAAGCAGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.3051025271416	2	527.306198	1052.59784	2.5619	0.0013509	-3.3536	-0.0017684	-0.79175	-0.0004175	527.3041630848196	83.761	0.42569	84.031	83.832	84.257	0.27029					33	13	3	0	0	0	0.71526	1	35050	35050		6.7232	0	1	6594700			32512	1928	16071	16137	37741	37741					0.07364834225882078
SQAQVILLT	9	Unmodified	_SQAQVILLT_					0	0	0		ENST00000469603.1_1_6:29625010-29632509:+|nuORF	ENST00000469603.1_1_6:29625010-29632509:+|nuORF	ENST00000469603.1_1_6:29625010-29632509:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7899963259697	2	486.78985	971.565146	0.86629	0.0004217	-0.29328	-0.00014277	0.573	0.00027893	486.78964303521843	55.828	0.41591	57.796	57.641	58.057	1.9684					30	13	3	0	0	0	0.51189	1	23441	23441		14.838	0	1	6647400			32513	6728	16072	16138	37742	37742					0.07822627103041668
SQAQVILLT	9	Unmodified	_SQAQVILLT_					0	0	0		ENST00000469603.1_1_6:29625010-29632509:+|nuORF	ENST00000469603.1_1_6:29625010-29632509:+|nuORF	ENST00000469603.1_1_6:29625010-29632509:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	486.78985	971.565146	0.75347	0.00036678	0.42678	0.00020775	1.1802	0.00057453	486.7898689909281	56.417	0.44864	57.832	57.584	58.033	1.4145	0.017937	0.00034164	NaN	14.838	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8747900			32514	6728	16072	16138							0.07822627103041668
SQCDACFK	8	Unmodified	_SQCDACFK_					0	0	0			REV__ENSG00000084070|ENST00000372718|SMAP2	REV__ENSG00000084070|ENST00000372718|SMAP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.1793701052666	2	451.180763	900.346973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.695	1	11.364	10.864	11.864	0.66934								0	0	0	1.0178	1	4448	4448		5.2307	2.3415	1		+		32515	8838	16073	16139	37743	37743					-0.1071862908257799
SQEQRRDQKWR	11	Unmodified	_SQEQRRDQKWR_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.5976745486259	3	506.262433	1515.76547	0.59659	0.00030203	0.010851	5.4935E-06	0.60744	0.00030752	506.2624850306185	14.073	0.40591	14.186	13.979	14.385	0.11295					34	12	4	0	0	0	1.0372	1	5810	5810		1.0136	0.50762	1	3313000			32516	3530	16074	16140	37744	37744					0.0282186975255172
SQEQRRDQKWR	11	Unmodified	_SQEQRRDQKWR_					0	0	0		ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	ENSG00000159450|ENST00000614923|TCHH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.2623474001884	3	506.262433	1515.76547	0.15882	8.0405E-05	-0.50497	-0.00025565	-0.34614	-0.00017524	506.2620542335052	13.496	0.44476	14.324	14.166	14.61	0.82788					33	14	4	0	0	0	1.0224	1	5624	5624		2.4348	0	1	1882800			32517	3530	16074	16140	37745	37745					0.0282186975255172
SQGVFSDLPI	10	Unmodified	_SQGVFSDLPI_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7789794802666	2	531.776939	1061.53933	2.1478	0.0011421	3.2743	0.0017412	5.4221	0.0028833	531.7783841946416	69.348	0.49765	70.714	70.472	70.969	1.3657					53	16	4	0	0	0	0.77604	1	29177	29177		14.838	1.7958	1	8913500	+		32518	9117	16075	16141	37746	37746					0.011017328607522359
SQHKIIHV	8	Unmodified	_SQHKIIHV_					0	0	0		ENST00000429248.1_1_7:56706781-56707144:-|nuORF	ENST00000429248.1_1_7:56706781-56707144:-|nuORF	ENST00000429248.1_1_7:56706781-56707144:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2863342165947	2	481.282526	960.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.905	1	89.352	88.852	89.852	1.4467								0	0	0	1.0178	1	37054	37054		2.3027	0	1				32519	6488	16076	16142	37747	37747					0.06864599745574651
SQHMNHRYSY	10	Unmodified	_SQHMNHRYSY_					0	0	0		nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275|ZEB1;ENSG00000148516|ENST00000424869|ZEB1;nc|ENSG00000169554|O60315-2|ZEB2;ENSG00000169554|ENST00000627532|ZEB2	nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000169554|O60315-2|ZEB2	nc|ENSG00000148516|P37275-3|ZEB1	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.7901489138603	2	661.788378	1321.5622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.47	1	95.594	95.094	96.094	0.12331								0	0	0	0.6561	1	39951	39951		8.7454	0	1				32520	3216;4095	16077	16143	37748	37748					-0.08571571293396119
SQIEADFRL	9	Unmodified	_SQIEADFRL_					0	0	0		ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	ENSG00000198900|ENST00000361337|TOP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7794677615166	2	539.780013	1077.54547	1.7738	0.00095749	-1.8894	-0.0010199	-0.11556	-6.2377E-05	539.778824578332	47.973	0.13862	48.303	48.228	48.367	0.33034					6	4	2	0	0	0	0.69306	1	20131	20131		7.609	1.8771	1	285010			32521	5099	16078	16144	37749	37749					0.009802510922781948
SQKEMIPGSV	10	Unmodified	_SQKEMIPGSV_					0	0	0		nc|ENSG00000108799|Q92800-5|EZH1	nc|ENSG00000108799|Q92800-5|EZH1	nc|ENSG00000108799|Q92800-5|EZH1	MSMS	GG20161007_CRH_Patient100_W632_02	4	359.1880981326103	3	359.186592	1074.53795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.55	1	101.74	101.24	102.24	0.19076								0	0	0	0.66222	1	42698	42698		0.69767	0	1				32522	7850	16079	16145	37750	37750					0.0036577550035872264
SQKFIPFV	8	Unmodified	_SQKFIPFV_					0	0	0		ENST00000549030.1_1_14:105856139-105857603:+|nuORF;ENST00000547903.1_1_14:105848293-105857603:+|nuORF;ENST00000551743.5_1_14:105849507-105861006:+|nuORF;nc|ENSG00000179364|Q86VP3-4|PACS2;nc|ENSG00000179364|Q86VP3|PACS2;ENSG00000179364|ENST00000447393|PACS2	ENST00000549030.1_1_14:105856139-105857603:+|nuORF	ENST00000549030.1_1_14:105856139-105857603:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2800475955009	2	483.276378	964.538203	1.8794	0.00090826	3.1786	0.0015361	5.0579	0.0024444	483.2773988040777	78.988	0.48094	78.988	78.756	79.237	0					38	15	3	0	0	0	0.89051	1	32827	32827		2.3027	0	1	11217000			32523	4512	16080	16146	37751	37751					0.054515632825200555
SQKFIPFV	8	Unmodified	_SQKFIPFV_					0	0	0		ENST00000549030.1_1_14:105856139-105857603:+|nuORF;ENST00000547903.1_1_14:105848293-105857603:+|nuORF;ENST00000551743.5_1_14:105849507-105861006:+|nuORF;nc|ENSG00000179364|Q86VP3-4|PACS2;nc|ENSG00000179364|Q86VP3|PACS2;ENSG00000179364|ENST00000447393|PACS2	ENST00000549030.1_1_14:105856139-105857603:+|nuORF	ENST00000549030.1_1_14:105856139-105857603:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2799560427666	2	483.276378	964.538203	2.4585	0.0011881	2.6469	0.0012792	5.1054	0.0024673	483.2774638358499	78.785	0.45412	79.095	78.895	79.349	0.30933					37	14	3	0	0	0	0.89051	2	32899	32899;33002		2.3027	0.24298	1	9201100			32524	4512	16080	16146	37752;37753	37752					0.054515632825200555
SQKSIKKA	8	Unmodified	_SQKSIKKA_					0	0	0			REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.2779418826103	2	445.276909	888.539266	3.3803	0.0015052	-2.045	-0.00091061	1.3353	0.00059457	445.275956662745	107.73	0.20406	107.89	107.77	107.98	0.15795					26	10	3	0	0	0	0.89176	1	46347	46347		0.79363	0	1	358760000	+		32525	15677	16081	16147	37754	37754					0.0905377765141111
SQKSIKKA	8	Unmodified	_SQKSIKKA_					0	0	0			REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	445.276909	888.539266	3.2513	0.0014477	-0.96583	-0.00043006	2.2855	0.0010177	445.2763900048181	107.76	0.15894	107.82	107.75	107.91	0.052452	-0.055849	0.00044122	NaN	0.79363	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53357000	+		32526	15677	16081	16147							0.0905377765141111
SQKSIKKA	8	Unmodified	_SQKSIKKA_					0	0	0			REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	445.276909	888.539266	3.3666	0.0014991	-1.5008	-0.00066828	1.8658	0.00083079	445.27611267819424	107.75	0.18303	107.91	107.81	107.99	0.15781	0.034523	-3.5215E-05	NaN	0.79363	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410610000	+		32527	15677	16081	16147							0.0905377765141111
SQKSIKKA	8	Unmodified	_SQKSIKKA_					0	0	0			REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	REV__tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	445.276909	888.539266	3.3803	0.0015052	-2.045	-0.00091061	1.3353	0.00059457	445.275956662745	107.73	0.20406	107.89	107.77	107.98	0.15795	0.021325	-0.00051987	NaN	0.79363	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358760000	+		32528	15677	16081	16147							0.0905377765141111
SQLPLLLPK	9	Unmodified	_SQLPLLLPK_					0	0	0		nc|ENSG00000168032|O75355-2|ENTPD3;ENSG00000168032|ENST00000301825|ENTPD3	nc|ENSG00000168032|O75355-2|ENTPD3	nc|ENSG00000168032|O75355-2|ENTPD3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	504.7044860720634	2	504.826235	1007.63792	1.3222	0.00066746	3.257	0.0016442	4.5792	0.0023117	504.82737338155374	109.56	0.16331	109.56	109.48	109.64	0					12	6	2	0	0	0	0.11833	1	47407	47407		1.8442	0	1	1444200			32529	4009	16082	16148	37755	37755					0.13440380896474835
SQLRKQSRR	9	Unmodified	_SQLRKQSRR_					0	0	0			REV__ENST00000562562.1_1_16:23706236-23712034:-|nuORF	REV__ENST00000562562.1_1_16:23706236-23712034:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8464843630791	2	579.844345	1157.67414	2.4566	0.0014245	1.6786	0.00097334	4.1352	0.0023978	579.8452201806564	88.432	0.39382	88.432	88.18	88.574	0					38	12	4	0	0	0	0.83753	2	37020	36901;37020		1.8442	0	1	4349700	+		32530	9906	16083	16149	37756;37757	37757					0.10160650845887176
SQLSYLTI	8	Unmodified	_SQLSYLTI_					0	0	0		nc|ENSG00000164631|P17014-3|ZNF12;nc|ENSG00000164631|P17014-4|ZNF12;nc|ENSG00000164631|P17014-5|ZNF12;ENSG00000164631|ENST00000405858|ZNF12	nc|ENSG00000164631|P17014-3|ZNF12	nc|ENSG00000164631|P17014-3|ZNF12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	924.5001708865166	1	924.503674	923.496398	2.5448	0.0023527	-0.82784	-0.00076534	1.7169	0.0015873	924.5025683413401	58.768	0.34155	59.094	58.937	59.278	0.32553					26	11	3	0	0	0	0.52405	2	24598	24598;24692		46.021	2.2739	1	5135500			32531	3785	16084	16150	37758;37759	37758					0.031589628033202644
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1758300662041	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.952	1	75.952	75.452	76.452	0								0	0	0	1.0178	1	31615	31615		0.40072	0	1		+		32532	12995	16085	16151	37760	37760					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1757079958916	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.074	1	76.074	75.574	76.574	0								0	0	0	1.0178	1	31666	31666		0.40072	0	1		+		32533	12995	16085	16151	37761	37761					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1755859255791	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.194	1	76.194	75.694	76.694	0								0	0	0	1.0178	1	31717	31717		0.40072	0	1		+		32534	12995	16085	16151	37762	37762					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1757079958916	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.435	1	76.435	75.935	76.935	0								0	0	0	1.0178	1	31822	31822		0.40072	0	1		+		32535	12995	16085	16151	37763	37763					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1755859255791	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.557	1	76.557	76.057	77.057	0								0	0	0	1.0178	1	31872	31872		0.40072	0	1		+		32536	12995	16085	16151	37764	37764					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1756164431572	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.694	1	76.694	76.194	77.194	0								0	0	0	1.0178	1	31928	31928		0.40072	0	1		+		32537	12995	16085	16151	37765	37765					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1754638552666	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.561	1	81.561	81.061	82.061	0								0	0	0	1.0178	1	33970	33970		0.40072	0	1		+		32538	12995	16085	16151	37766	37766					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1754638552666	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.673	1	81.673	81.173	82.173	0								0	0	0	1.0178	1	34020	34020		0.40072	0	1		+		32539	12995	16085	16151	37767	37767					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1756774783134	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.799	1	81.799	81.299	82.299	0								0	0	0	1.0178	1	34073	34073		0.40072	0	1		+		32540	12995	16085	16151	37768	37768					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1757995486259	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.034	1	82.034	81.534	82.534	0								0	0	0	1.0178	1	34173	34173		0.40072	0	1		+		32541	12995	16085	16151	37769	37769					0.044843204745689036
SQQIKGHL	8	Unmodified	_SQQIKGHL_					0	0	0			REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	REV__ENST00000426044.1_1_19:12305955-12345626:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1758605837822	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.804	1	77.098	76.598	77.598	1.2938								0	0	0	1.0178	1	31817	31817		0.40072	0	1		+		32542	12995	16085	16151	37770	37770					0.044843204745689036
SQRIQRPGR	9	Unmodified	_SQRIQRPGR_					0	0	0		ENST00000534320.5_1_11:587364-591403:+|nuORF	ENST00000534320.5_1_11:587364-591403:+|nuORF	ENST00000534320.5_1_11:587364-591403:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	549.3184081912041	2	549.317963	1096.62137	2.2919	0.001259	-1.5824	-0.00086927	0.70944	0.00038971	549.3169281752354	86.206	0.4492	86.206	85.978	86.427	0					38	14	4	0	0	0	0.79362	2	35910	35910;35964		3.5965	0.97858	1	8733400			32543	7187	16086	16152	37771;37772	37771					0.0769269278309821
SQRLVKLPIR	10	Unmodified	_SQRLVKLPIR_					0	0	0			REV__nc|ENSG00000185989|Q14644-2|RASA3	REV__nc|ENSG00000185989|Q14644-2|RASA3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1994811892509	4	303.200208	1208.77173	-2.5807	-0.00078246	-1.4565	-0.0004416	-4.0371	-0.0012241	303.1997851907609	33.758	1.2591	33.758	33.233	34.492	0					121	40	4	0	0	0	0.89803	1	13991	13991		0.50596	0	1	7420400	+		32544	11487	16087	16153	37773	37773					0.17569039722025082
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2514221072197	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.036	1	29.316	28.816	29.816	0.2793								0	0	0	0.66222	1	12152	12152		0.69767	0.19171	1				32545	1469	16088	16154	37774	37774					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2511169314384	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.833	1	31.119	30.619	31.619	0.2859								0	0	0	0.66218	1	12936	12936		0.77653	0	1				32546	1469	16088	16154	37775	37775					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509338259697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.102	1	31.393	30.893	31.893	0.29086								0	0	0	0.66218	1	13053	13053		0.77653	0.27058	1				32547	1469	16088	16154	37776	37776					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2525817751884	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.56	1	31.851	31.351	32.351	0.29086								0	0	0	0.66222	1	13247	13247		0.69767	0.07084	1				32548	1469	16088	16154	37777	37777					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.842	1	34.139	33.639	34.639	0.29701								0	0	0	0.66141	1	14211	14211		2.086	0.75636	1				32549	1469	16088	16154	37778	37778					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513610720634	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.17	1	29.449	28.949	29.949	1.2789								0	0	0	0.66218	1	11809	11809		0.77653	0.27058	1				32550	1469	16088	16154	37779	37779					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2516662478447	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.847	1	32.129	31.629	32.629	1.2825								0	0	0	0.66222	1	12945	12945		0.69767	0.19171	1				32551	1469	16088	16154	37780	37780					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509338259697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.453	1	80.704	80.204	81.204	1.2512								0	0	0	0.66218	1	33349	33349		0.77653	0.21336	1				32552	1469	16088	16154	37781	37781					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2508422732353	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.681	1	30.48	29.98	30.98	1.7987								0	0	0	0.66218	1	12012	12012		0.77653	0.27058	1				32553	1469	16088	16154	37782	37782					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2500182986259	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.976	1	30.775	30.275	31.275	1.7987								0	0	0	0.66218	1	12140	12140		0.77653	0.14971	1				32554	1469	16088	16154	37783	37783					0.14134698402403956
SQRRRLLVPA	10	Unmodified	_SQRRRLLVPA_					0	0	0		ENST00000523752.5_1_8:22880186-22885396:-|nuORF;ENST00000523504.5_1_8:22880186-22926453:-|nuORF;nc|ENSG00000120889|O14763-2|TNFRSF10B;ENSG00000120889|ENST00000276431|TNFRSF10B;ENSG00000104689|ENST00000221132|TNFRSF10A	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	ENST00000523752.5_1_8:22880186-22885396:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2508727908134	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.987	1	33.812	33.312	34.312	1.8246								0	0	0	0.66141	1	13409	13409		2.086	0	1				32555	1469	16088	16154	37784	37784					0.14134698402403956
SQSGLVHIW	9	Unmodified	_SQSGLVHIW_					0	0	0		nc|ENSG00000185838|Q9BYB4-2|GNB1L;ENSG00000185838|ENST00000329517|GNB1L	nc|ENSG00000185838|Q9BYB4-2|GNB1L	nc|ENSG00000185838|Q9BYB4-2|GNB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7735473513603	2	513.771991	1025.52943	1.9259	0.00098948	0.37844	0.00019443	2.3043	0.0011839	513.7723986625884	46.042	0.47126	47.417	47.146	47.617	1.3751					36	14	3	0	0	0	0.002761	3	19288	19236;19288;19330		128.37	82.344	1	5539800			32556	4764	16089	16155	37785;37786;37787	37786					0.01768589646030705
SQSGLVHIW	9	Unmodified	_SQSGLVHIW_					0	0	0		nc|ENSG00000185838|Q9BYB4-2|GNB1L;ENSG00000185838|ENST00000329517|GNB1L	nc|ENSG00000185838|Q9BYB4-2|GNB1L	nc|ENSG00000185838|Q9BYB4-2|GNB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.7733032107353	2	513.771991	1025.52943	1.8356	0.00094309	0.60632	0.00031151	2.4419	0.0012546	513.7724593722827	45.513	0.47771	47.472	47.239	47.716	1.9596					36	14	3	0	0	0	0.0037165	4	19061	19011;19061;19100;19160		125.62	81.218	1	4325300			32557	4764	16089	16155	37788;37789;37790;37791	37789					0.01768589646030705
SQSLGKIT	8	Unmodified	_SQSLGKIT_					0	0	0		MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2394286990166	2	417.239993	832.465432	0.55022	0.00022957	-3.0648	-0.0012788	-2.5146	-0.0010492	417.23838305195636	70.461	0.8559	70.461	70.179	71.035	0					56	27	3	0	0	0	0.88587	1	29290	29290		5.2307	0	1	21308000			32558	7792	16090	16156	37792	37792					0.04249809489078871
SQSLGKIT	8	Unmodified	_SQSLGKIT_					0	0	0		MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2391235232353	2	417.239993	832.465432	1.5014	0.00062642	-3.3608	-0.0014023	-1.8594	-0.00077583	417.2383602623401	70.284	1.4516	70.606	69.721	71.173	0.32224					71	46	3	0	0	0	0.89051	1	29464	29464		2.3027	0	1	17226000			32559	7792	16090	16156	37793	37793					0.04249809489078871
SQSLGKIT	8	Unmodified	_SQSLGKIT_					0	0	0		MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MER4-int_dup2271|chr13:22891256-22892771:+|2.029533609635038|0.1446850670061226|3.81|418.0|67|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.2395507693291	2	417.239993	832.465432	1.9311	0.00080573	-2.83	-0.0011808	-0.89887	-0.00037505	417.2385123838464	69.349	1.2214	70.715	69.875	71.096	1.3657					60	39	3	0	0	0	0.89176	1	29071	29071		0.79363	0	1	8977700			32560	7792	16090	16156	37794	37794					0.04249809489078871
SQVLFAVVF	9	Unmodified	_SQVLFAVVF_					0	0	0		ENSG00000105438|ENST00000330720|KDELR1;ENST00000594643.1_1_19:48893647-48894615:-|nuORF;ENST00000599084.1_1_19:48892794-48894615:-|nuORF	ENSG00000105438|ENST00000330720|KDELR1	ENSG00000105438|ENST00000330720|KDELR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.2904846072197	2	505.289485	1008.56442	2.1526	0.0010877	3.3529	0.0016942	5.5055	0.0027819	505.29024800645817	81.54	0.50581	81.54	81.288	81.794	0					48	16	5	0	0	0	0.7849	1	33952	33952		3.9444	0.3479	1	10716000			32561	1518	16091	16157	37795	37795					0.060478324539985806
SQVPQPAP	8	Unmodified	_SQVPQPAP_					0	0	0			REV__nc|ENSG00000141867|O60885-2|BRD4	REV__nc|ENSG00000141867|O60885-2|BRD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2177917361259	2	412.21906	822.423567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.869	1	20.928	20.428	21.428	1.0585								0	0	0	1.0178	1	8273	8273		4.756	0	1		+		32562	10166	16092	16158	37796	37796					0.005252538005606766
SQYPFPVTL	9	Unmodified	_SQYPFPVTL_					0	0	0		nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-4|RABGAP1L	nc|ENSG00000152061|Q5R372-4|RABGAP1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2780029177666	2	526.276575	1050.5386	3.5483	0.0018674	-0.1853	-9.7518E-05	3.363	0.0017699	526.2766142444257	73.796	1.1274	75.114	74.215	75.342	1.318					61	35	4	0	0	0	0.046715	3	30946	30898;30946;30997		70.332	28.237	1	3895600			32563	3309	16093	16159	37797;37798;37799	37798					0.015349382117165078
SQYPFPVTL	9	Unmodified	_SQYPFPVTL_					0	0	0		nc|ENSG00000152061|Q5R372-4|RABGAP1L;nc|ENSG00000152061|Q5R372|RABGAP1L;nc|ENSG00000152061|Q5R372-3|RABGAP1L;ENSG00000152061|ENST00000681986|RABGAP1L;nc|ENSG00000152061|Q5R372-2|RABGAP1L	nc|ENSG00000152061|Q5R372-4|RABGAP1L	nc|ENSG00000152061|Q5R372-4|RABGAP1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2784911990166	2	526.276575	1050.5386	2.6888	0.001415	-0.072468	-3.8138E-05	2.6163	0.0013769	526.2763114465181	73.258	0.65987	75.068	74.671	75.331	1.8101					42	20	3	0	0	0	0.046715	2	30747	30706;30747		70.332	37.546	1	3755200			32564	3309	16093	16159	37800;37801	37801					0.015349382117165078
SQYQGVVVY	9	Unmodified	_SQYQGVVVY_					0	0	0		ENSG00000132603|ENST00000254940|NIP7;ENST00000565034.1_1_16:69373956-69375289:+|nuORF	ENSG00000132603|ENST00000254940|NIP7	ENSG00000132603|ENST00000254940|NIP7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.7639648318291	2	521.763832	1041.51311	1.7126	0.00089359	-0.69187	-0.000361	1.0208	0.0005326	521.763850794735	38.421	0.3566	39.718	39.538	39.895	1.2961					16	11	2	0	0	0	0.093059	1	16096	16096		51.63	23.143	1	3036200			32565	2541	16094	16160	37802	37802					-0.0059853631069017865
SRAARFHV	8	Unmodified	_SRAARFHV_					0	0	0			REV__ENSG00000092445|ENST00000263798|TYRO3	REV__ENSG00000092445|ENST00000263798|TYRO3	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1789733767509	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.732	1	82.012	81.512	82.512	0.2802								0	0	0	1.0178	1	34173	34173		1.4819	0	1		+		32566	8915	16095	16161	37803	37803					0.04122562288557674
SRAARFHV	8	Unmodified	_SRAARFHV_					0	0	0			REV__ENSG00000092445|ENST00000263798|TYRO3	REV__ENSG00000092445|ENST00000263798|TYRO3	MSMS	GG20161007_CRH_Patient100_A02_02	2	315.1796447634697	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.977	1	82.257	81.757	82.757	0.2802								0	0	0	1.0178	1	34277	34277		1.4819	0	1		+		32567	8915	16095	16161	37804	37804					0.04122562288557674
SRAFGGKG	8	Unmodified	_SRAFGGKG_					0	0	0		nc|ENSG00000145730|P19021-6|PAM	nc|ENSG00000145730|P19021-6|PAM	nc|ENSG00000145730|P19021-6|PAM	MSMS	GG20161007_CRH_Patient100_A02_02	2	390.2129089236259	2	390.211569	778.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.83	110.33	111.33	0.047043								0	0	0	1.0178	1	47776	47776		0	0	1				32568	7889	16096	16162	37805	37805					0.010518067232510475
SRALGDFD	8	Unmodified	_SRALGDFD_					0	0	0		nc|ENSG00000100614|P35813-2|PPM1A;ENSG00000100614|ENST00000395076|PPM1A;nc|ENSG00000100614|P35813-3|PPM1A	nc|ENSG00000100614|P35813-2|PPM1A	nc|ENSG00000100614|P35813-2|PPM1A	MSMS	GG20161007_CRH_Patient100_A02_02	2	440.7099792361259	2	440.711599	879.408646	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.722	1	52.048	51.548	52.548	0.32553								0	0	0	1.0178	1	21666	21666		2.0598	0	1				32569	1293	16097	16163	37806	37806					-0.03588238067436578
SRALLQLL	8	Unmodified	_SRALLQLL_					0	0	0			REV__ENST00000370544.9_1_1:87794601-87794751:+|nuORF	REV__ENST00000370544.9_1_1:87794601-87794751:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	457.2965576052666	2	457.295102	912.575651	3.3614	0.0015372	0.70155	0.00032081	4.063	0.001858	457.29520977893003	106.62	0.14178	106.78	106.7	106.84	0.15781					15	6	3	0	0	0	0.89181	1	45703	45703		0.6015	0	1	24364000	+		32570	12661	16098	16164	37807	37807					0.11586654548136721
SRALRHPL	8	Unmodified	_SRALRHPL_					0	0	0		ENST00000472410.5_1_1:27684311-27685985:-|nuORF	ENST00000472410.5_1_1:27684311-27685985:-|nuORF	ENST00000472410.5_1_1:27684311-27685985:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1957580447197	3	317.194521	948.561733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.99	1	105.05	104.55	105.55	0.056801								0	0	0	1.0178	1	44419	44419		1.8442	0	1				32571	6749	16099	16165	37808	37808					0.08539421839691386
SRAPRAGK	8	Unmodified	_SRAPRAGK_					0	0	0		ENST00000504490.2_1_4:113279997-113280900:+|nuORF	ENST00000504490.2_1_4:113279997-113280900:+|nuORF	ENST00000504490.2_1_4:113279997-113280900:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7524291872978	2	421.751393	841.488233	2.1316	0.000899	0.45529	0.00019202	2.5869	0.001091	421.75133165829266	69.447	0.89883	71.3	70.709	71.608	1.853					54	28	3	0	0	0	0.89008	1	29145	29145		2.5775	0	1	3756500			32572	6998	16100	16166	37809	37809					0.061148733972345326
SRASKLKRPL	10	Unmodified	_SRASKLKRPL_					0	0	0			REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	REV__ENST00000562441.5_1_16:30012641-30015954:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1534301638603	3	385.915535	1154.72478	1.3918	0.00053712	-3.4523	-0.0013323	-2.0605	-0.00079517	386.2492997683388	77.868	0.31043	79.619	79.467	79.777	1.7514					13	9	2	0	0	0	0.12557	1	32615	32615		0.62683	0.35781	1	445550	+		32573	13905	16101	16167	37810	37810					0.15360180170910098
SRCSACSFL	9	Unmodified	_SRCSACSFL_					0	0	0		chr20:63975532-63975732|340|10.41|0.57|4.2|-|1|SAMD10,None|1	chr20:63975532-63975732|340|10.41|0.57|4.2|-|1|SAMD10,None|1	chr20:63975532-63975732|340|10.41|0.57|4.2|-|1|SAMD10,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	486.7858764529228	2	487.215137	972.415722	4.2341	0.0020629	-2.0858	-0.0010162	2.1483	0.0010467	487.2140562976722	92.203	0.35414	93.14	92.988	93.342	0.93623					19	10	3	0	0	0	0.11568	1	38824	38824		6.7232	1.4925	1	568560			32574	252	16102	16168	37811	37811					-0.07158964782854582
SRCTSSQFR	9	Unmodified	_SRCTSSQFR_					0	0	0			REV__ENST00000328599.4_1_8:125463328-125463391:+|nuORF	REV__ENST00000328599.4_1_8:125463328-125463391:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2556640505791	2	536.25364	1070.49273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.88	1	103.06	102.56	103.56	0.18066								0	0	0	0.42693	1	43294	43294		1.4819	0.68827	1		+		32575	12438	16103	16169	37812	37812					-0.039700302421806555
SRDRNGVLLLD	11	Unmodified	_SRDRNGVLLLD_					0	0	0			REV__ENST00000525337.1_1_11:59522139-59522391:-|nuORF	REV__ENST00000525337.1_1_11:59522139-59522391:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	629.3477661013603	2	629.349126	1256.6837	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.115	1	86.711	86.211	87.211	1.5962								0	0	0	0.63775	1	35731	35731		2.4985	0.65425	1		+		32576	13661	16104	16170	37813	37813					0.06562374340774113
SREGSSHHL	9	Unmodified	_SREGSSHHL_					0	0	0		nc|nan|A6NFR6-3|C5orf60;nc|nan|A6NFR6-4|C5orf60;nc|nan|A6NFR6-2|C5orf60;nc|nan|A6NFR6|C5orf60	nc|nan|A6NFR6-3|C5orf60	nc|nan|A6NFR6-3|C5orf60	MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1636840701103	3	337.165178	1008.47371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.428	1	97.428	96.928	97.928	0								0	0	0	0.41514	1	40732	40732		4.5289	0	1				32577	8031	16105	16171	37814	37814					-0.030192435415756336
SRGCPGHD	8	Unmodified	_SRGCPGHD_					0	0	0		ENST00000442760.2_1_13:45914489-45915204:-|nuORF	ENST00000442760.2_1_13:45914489-45915204:-|nuORF	ENST00000442760.2_1_13:45914489-45915204:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.6749145388603	2	414.674494	827.334435	-0.29386	-0.00012186	2.4033	0.0009966	2.1095	0.00087474	414.6752974336025	19.964	0.40379	19.964	19.792	20.196	0					18	12	2	0	0	0	0.89051	1	8302	8302		2.3027	0	1	1022700			32578	6568	16106	16172	37815	37815					-0.08613904430592356
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537109255791	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.077	1	49.407	48.907	49.907	0.33019								0	0	0	0.42693	1	20573	20573		0	0	1				32579	2894	16107	16173	37816	37816					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534362673759	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.219	1	49.549	49.049	50.049	0.33019								0	0	0	0.42693	1	20631	20631		0	0	1				32580	2894	16107	16173	37817	37817					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535583376884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.311	1	49.641	49.141	50.141	0.33019								0	0	0	0.42693	1	20668	20668		0	0	1				32581	2894	16107	16173	37818	37818					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2540161013603	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.485	1	49.815	49.315	50.315	0.33019								0	0	0	0.42693	1	20739	20739		0	0	1				32582	2894	16107	16173	37819	37819					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534667849541	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.804	1	50.134	49.634	50.634	0.33019								0	0	0	0.42693	1	20868	20868		0	0	1				32583	2894	16107	16173	37820	37820					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536498904228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.147	1	50.477	49.977	50.977	0.32964								0	0	0	0.42693	1	21010	21010		0	0	1				32584	2894	16107	16173	37821	37821					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534973025322	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.799	1	54.12	53.62	54.62	0.32088								0	0	0	0.42693	1	22535	22535		0	0	1				32585	2894	16107	16173	37822	37822					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2532836794853	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.896	1	54.217	53.717	54.717	0.32088								0	0	0	0.42693	1	22575	22575		0	0	1				32586	2894	16107	16173	37823	37823					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2543823122978	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.306	1	54.627	54.127	55.127	0.32088								0	0	0	0.42693	1	22743	22743		0	0	1				32587	2894	16107	16173	37824	37824					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538940310478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.392	1	54.713	54.213	55.213	0.32088								0	0	0	0.42693	1	22778	22778		0	0	1				32588	2894	16107	16173	37825	37825					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2521545290947	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.489	1	54.81	54.31	55.31	0.32088								0	0	0	0.42693	1	22818	22818		0	0	1				32589	2894	16107	16173	37826	37826					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525207400322	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.639	1	54.96	54.46	55.46	0.32088								0	0	0	0.42693	1	22881	22881		0	0	1				32590	2894	16107	16173	37827	37827					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2532531619072	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.731	1	55.052	54.552	55.552	0.32088								0	0	0	0.42693	1	22920	22920		0	0	1				32591	2894	16107	16173	37828	37828					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2530395388603	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.839	1	55.16	54.66	55.66	0.32088								0	0	0	0.42693	1	22965	22965		0	0	1				32592	2894	16107	16173	37829	37829					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.94	1	55.261	54.761	55.761	0.32088								0	0	0	0.42693	1	23006	23006		0	0	1				32593	2894	16107	16173	37830	37830					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2531005740166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.043	1	55.364	54.864	55.864	0.32088								0	0	0	0.42693	1	23048	23048		0	0	1				32594	2894	16107	16173	37831	37831					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2531616091728	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.153	1	55.474	54.974	55.974	0.32088								0	0	0	0.42693	1	23093	23093		0	0	1				32595	2894	16107	16173	37832	37832					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536193728447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.251	1	55.572	55.072	56.072	0.32088								0	0	0	0.42693	1	23134	23134		0	0	1				32596	2894	16107	16173	37833	37833					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536193728447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.347	1	55.668	55.168	56.168	0.32088								0	0	0	0.42693	1	23172	23172		0	0	1				32597	2894	16107	16173	37834	37834					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2540771365166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.439	1	55.76	55.26	56.26	0.32088								0	0	0	0.42693	1	23210	23210		0	0	1				32598	2894	16107	16173	37835	37835					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2542907595634	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.534	1	55.854	55.354	56.354	0.32088								0	0	0	0.42693	1	23249	23249		0	0	1				32599	2894	16107	16173	37836	37836					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2541381716728	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.625	1	55.946	55.446	56.446	0.32088								0	0	0	0.42693	1	23288	23288		0	0	1				32600	2894	16107	16173	37837	37837					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535888552666	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.721	1	56.042	55.542	56.542	0.32088								0	0	0	0.42693	1	23329	23329		0	0	1				32601	2894	16107	16173	37838	37838					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2540771365166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.847	1	56.168	55.668	56.668	0.32088								0	0	0	0.42693	1	23385	23385		0	0	1				32602	2894	16107	16173	37839	37839					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535278201103	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.957	1	56.278	55.778	56.778	0.32088								0	0	0	0.42693	1	23435	23435		0	0	1				32603	2894	16107	16173	37840	37840					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2532836794853	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.063	1	56.384	55.884	56.884	0.32088								0	0	0	0.42693	1	23485	23485		0	0	1				32604	2894	16107	16173	37841	37841					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537414431572	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.173	1	56.494	55.994	56.994	0.32103								0	0	0	0.42693	1	23537	23537		0	0	1				32605	2894	16107	16173	37842	37842					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2545043826103	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.294	1	56.615	56.115	57.115	0.32103								0	0	0	0.42693	1	23592	23592		0	0	1				32606	2894	16107	16173	37843	37843					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2542907595634	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.43	1	56.751	56.251	57.251	0.32103								0	0	0	0.42693	1	23654	23654		0	0	1				32607	2894	16107	16173	37844	37844					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2520934939384	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.935	1	57.256	56.756	57.756	0.32103								0	0	0	0.42693	1	23875	23875		0	0	1				32608	2894	16107	16173	37845	37845					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.204	1	57.525	57.025	58.025	0.32103								0	0	0	0.42693	1	23987	23987		0	0	1				32609	2894	16107	16173	37846	37846					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537109255791	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.491	1	57.814	57.314	58.314	0.32298								0	0	0	0.42693	1	24107	24107		0	0	1				32610	2894	16107	16173	37847	37847					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538024783134	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.623	1	57.946	57.446	58.446	0.32298								0	0	0	0.42693	1	24161	24161		0	0	1				32611	2894	16107	16173	37848	37848					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2541381716728	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.744	1	58.067	57.567	58.567	0.32298								0	0	0	0.42693	1	24211	24211		0	0	1				32612	2894	16107	16173	37849	37849					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2540771365166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.969	1	58.292	57.792	58.792	0.32298								0	0	0	0.42693	1	24301	24301		0	0	1				32613	2894	16107	16173	37850	37850					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536804080009	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.062	1	58.385	57.885	58.885	0.32298								0	0	0	0.42693	1	24339	24339		0	0	1				32614	2894	16107	16173	37851	37851					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538940310478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.158	1	58.481	57.981	58.981	0.32298								0	0	0	0.42693	1	24378	24378		0	0	1				32615	2894	16107	16173	37852	37852					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539855837822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.254	1	58.577	58.077	59.077	0.32298								0	0	0	0.42693	1	24417	24417		0	0	1				32616	2894	16107	16173	37853	37853					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.351	1	58.674	58.174	59.174	0.32298								0	0	0	0.42693	1	24457	24457		0	0	1				32617	2894	16107	16173	37854	37854					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539855837822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.479	1	58.802	58.302	59.302	0.32298								0	0	0	0.42693	1	24510	24510		0	0	1				32618	2894	16107	16173	37855	37855					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537414431572	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.607	1	58.932	58.432	59.432	0.32553								0	0	0	0.42693	1	24563	24563		0	0	1				32619	2894	16107	16173	37856	37856					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534057497978	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.724	1	59.05	58.55	59.55	0.32553								0	0	0	0.42693	1	24611	24611		0	0	1				32620	2894	16107	16173	37857	37857					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.818	1	59.143	58.643	59.643	0.32553								0	0	0	0.42693	1	24649	24649		0	0	1				32621	2894	16107	16173	37858	37858					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539550662041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.914	1	59.239	58.739	59.739	0.32553								0	0	0	0.42693	1	24688	24688		0	0	1				32622	2894	16107	16173	37859	37859					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.02	1	59.345	58.845	59.845	0.32553								0	0	0	0.42693	1	24733	24733		0	0	1				32623	2894	16107	16173	37860	37860					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2531005740166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.145	1	59.471	58.971	59.971	0.32553								0	0	0	0.42693	1	24786	24786		0	0	1				32624	2894	16107	16173	37861	37861					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2524597048759	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.243	1	59.568	59.068	60.068	0.32553								0	0	0	0.42693	1	24827	24827		0	0	1				32625	2894	16107	16173	37862	37862					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534667849541	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.532	1	59.858	59.358	60.358	0.32553								0	0	0	0.42693	1	24947	24947		0	0	1				32626	2894	16107	16173	37863	37863					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2535583376884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.625	1	59.951	59.451	60.451	0.32553								0	0	0	0.42693	1	24985	24985		0	0	1				32627	2894	16107	16173	37864	37864					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2539550662041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.855	1	60.183	59.683	60.683	0.32809								0	0	0	0.42693	1	25081	25081		0	0	1				32628	2894	16107	16173	37865	37865					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538940310478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.983	1	60.311	59.811	60.811	0.32809								0	0	0	0.42693	1	25138	25138		0	0	1				32629	2894	16107	16173	37866	37866					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538635134697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.868	1	61.196	60.696	61.696	0.32809								0	0	0	0.42693	1	25503	25503		0	0	1				32630	2894	16107	16173	37867	37867					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2534973025322	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.304	1	61.634	61.134	62.134	0.32974								0	0	0	0.42693	1	25685	25685		0	0	1				32631	2894	16107	16173	37868	37868					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.584	1	61.914	61.414	62.414	0.32974								0	0	0	0.42693	1	25803	25803		0	0	1				32632	2894	16107	16173	37869	37869					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536193728447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.705	1	62.035	61.535	62.535	0.32974								0	0	0	0.42693	1	25854	25854		0	0	1				32633	2894	16107	16173	37870	37870					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2538940310478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.922	1	62.252	61.752	62.752	0.32974								0	0	0	0.42693	1	25945	25945		0	0	1				32634	2894	16107	16173	37871	37871					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537414431572	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.047	1	62.377	61.877	62.877	0.32974								0	0	0	0.42693	1	25996	25996		0	0	1				32635	2894	16107	16173	37872	37872					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536498904228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.238	1	62.567	62.067	63.067	0.32974								0	0	0	0.42693	1	26075	26075		0	0	1				32636	2894	16107	16173	37873	37873					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2537414431572	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.357	1	62.687	62.187	63.187	0.32974								0	0	0	0.42693	1	26126	26126		0	0	1				32637	2894	16107	16173	37874	37874					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536193728447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.698	1	63.027	62.527	63.527	0.32974								0	0	0	0.42693	1	26269	26269		0	0	1				32638	2894	16107	16173	37875	37875					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2536498904228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.228	1	63.558	63.058	64.058	0.32974								0	0	0	0.42693	1	26490	26490		0	0	1				32639	2894	16107	16173	37876	37876					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2522155642509	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.84	1	110.88	110.38	111.38	0.047043								0	0	0	0.42693	1	47805	47805		0	0	1				32640	2894	16107	16173	37877	37877					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525512576103	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.93	1	110.98	110.48	111.48	0.047043								0	0	0	0.42693	1	47839	47839		0	0	1				32641	2894	16107	16173	37878	37878					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2527343630791	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.02	1	111.06	110.56	111.56	0.047043								0	0	0	0.42693	1	47875	47875		0	0	1				32642	2894	16107	16173	37879	37879					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525817751884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.11	1	111.16	110.66	111.66	0.047043								0	0	0	0.42693	1	47912	47912		0	0	1				32643	2894	16107	16173	37880	37880					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2526428103447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.2	1	111.25	110.75	111.75	0.047043								0	0	0	0.42693	1	47949	47949		0	0	1				32644	2894	16107	16173	37881	37881					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2525817751884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.29	1	111.34	110.84	111.84	0.047043								0	0	0	0.42693	1	47987	47987		0	0	1				32645	2894	16107	16173	37882	37882					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2536498904228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.136	1	38.42	37.92	38.92	1.284								0	0	0	0.42693	1	15590	15590		0	0	1				32646	2894	16107	16173	37883	37883					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2526733279228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.226	1	38.51	38.01	39.01	1.284								0	0	0	0.42693	1	15628	15628		0	0	1				32647	2894	16107	16173	37884	37884					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.322	1	38.606	38.106	39.106	1.284								0	0	0	0.42693	1	15668	15668		0	0	1				32648	2894	16107	16173	37885	37885					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2525817751884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.417	1	38.701	38.201	39.201	1.284								0	0	0	0.42693	1	15708	15708		0	0	1				32649	2894	16107	16173	37886	37886					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532531619072	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.506	1	38.79	38.29	39.29	1.284								0	0	0	0.42693	1	15746	15746		0	0	1				32650	2894	16107	16173	37887	37887					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2527038455009	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.695	1	38.979	38.479	39.479	1.284								0	0	0	0.42693	1	15824	15824		0	0	1				32651	2894	16107	16173	37888	37888					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532226443291	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.784	1	39.068	38.568	39.568	1.284								0	0	0	0.42693	1	15861	15861		0	0	1				32652	2894	16107	16173	37889	37889					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532531619072	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.876	1	39.16	38.66	39.66	1.284								0	0	0	0.42693	1	15898	15898		0	0	1				32653	2894	16107	16173	37890	37890					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2537414431572	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.976	1	39.26	38.76	39.76	1.284								0	0	0	0.42693	1	15938	15938		0	0	1				32654	2894	16107	16173	37891	37891					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532226443291	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.078	1	39.362	38.862	39.862	1.284								0	0	0	0.42693	1	15980	15980		0	0	1				32655	2894	16107	16173	37892	37892					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2531921267509	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.207	1	39.497	38.997	39.997	1.2891								0	0	0	0.42693	1	16032	16032		0	0	1				32656	2894	16107	16173	37893	37893					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2535278201103	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.981	1	47.356	46.856	47.856	1.3751								0	0	0	0.42693	1	19261	19261		0	0	1				32657	2894	16107	16173	37894	37894					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532531619072	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.083	1	47.459	46.959	47.959	1.3751								0	0	0	0.42693	1	19303	19303		0	0	1				32658	2894	16107	16173	37895	37895					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.393	1	47.768	47.268	48.268	1.3751								0	0	0	0.42693	1	19432	19432		0	0	1				32659	2894	16107	16173	37896	37896					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2533141970634	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.541	1	47.916	47.416	48.416	1.3751								0	0	0	0.42693	1	19495	19495		0	0	1				32660	2894	16107	16173	37897	37897					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2530090212822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.764	1	48.146	47.646	48.646	1.3825								0	0	0	0.42693	1	19586	19586		0	0	1				32661	2894	16107	16173	37898	37898					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2531310915947	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.241	1	48.624	48.124	49.124	1.3825								0	0	0	0.42693	1	19782	19782		0	0	1				32662	2894	16107	16173	37899	37899					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2539550662041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.655	1	49.037	48.537	49.537	1.3825								0	0	0	0.42693	1	19949	19949		0	0	1				32663	2894	16107	16173	37900	37900					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2535583376884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.75	1	49.133	48.633	49.633	1.3825								0	0	0	0.42693	1	19989	19989		0	0	1				32664	2894	16107	16173	37901	37901					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2532226443291	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.844	1	49.226	48.726	49.726	1.3825								0	0	0	0.42693	1	20028	20028		0	0	1				32665	2894	16107	16173	37902	37902					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2542602419853	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.381	1	49.769	49.269	50.269	1.388								0	0	0	0.42693	1	20251	20251		0	0	1				32666	2894	16107	16173	37903	37903					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2560607790947	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.64	1	101.81	101.31	102.31	0.17032								0	0	0	0.42693	1	42766	42766		0	0	1				32667	2894	16107	16173	37904	37904					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2555114626884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.78	1	101.95	101.45	102.45	0.17032								0	0	0	0.42693	1	42824	42824		0	0	1				32668	2894	16107	16173	37905	37905					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2529785037041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.85	1	103.02	102.52	103.52	0.16445								0	0	0	0.42693	1	43327	43327		0	0	1				32669	2894	16107	16173	37906	37906					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	363.2558166384697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.71	1	109.88	109.38	110.38	0.16133								0	0	0	0.42693	1	47665	47665		0	0	1				32670	2894	16107	16173	37907	37907					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9722	1	3.7206	3.2206	4.2206	0.7484								0	0	0	0.42693	1	1233	1233		0	0	1				32671	2894	16107	16173	37908	37908					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0787	1	3.8271	3.3271	4.3271	0.7484								0	0	0	0.42693	1	1278	1278		0	0	1				32672	2894	16107	16173	37909	37909					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1782	1	3.9266	3.4266	4.4266	0.7484								0	0	0	0.42693	1	1318	1318		0	0	1				32673	2894	16107	16173	37910	37910					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2791	1	4.0243	3.5243	4.5243	0.74525								0	0	0	0.42693	1	1360	1360		0	0	1				32674	2894	16107	16173	37911	37911					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3705	1	4.1157	3.6157	4.6157	0.74525								0	0	0	0.42693	1	1398	1398		0	0	1				32675	2894	16107	16173	37912	37912					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4673	1	4.2125	3.7125	4.7125	0.74525								0	0	0	0.42693	1	1438	1438		0	0	1				32676	2894	16107	16173	37913	37913					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2531005740166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5605	1	4.3057	3.8057	4.8057	0.74525								0	0	0	0.42693	1	1477	1477		0	0	1				32677	2894	16107	16173	37914	37914					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6558	1	4.401	3.901	4.901	0.74525								0	0	0	0.42693	1	1516	1516		0	0	1				32678	2894	16107	16173	37915	37915					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528259158134	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7549	1	4.5002	4.0002	5.0002	0.74525								0	0	0	0.42693	1	1557	1557		0	0	1				32679	2894	16107	16173	37916	37916					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8505	1	4.5957	4.0957	5.0957	0.74525								0	0	0	0.42693	1	1596	1596		0	0	1				32680	2894	16107	16173	37917	37917					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529785037041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9378	1	4.683	4.183	5.183	0.74525								0	0	0	0.42693	1	1632	1632		0	0	1				32681	2894	16107	16173	37918	37918					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0352	1	4.7804	4.2804	5.2804	0.74525								0	0	0	0.42693	1	1672	1672		0	0	1				32682	2894	16107	16173	37919	37919					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530090212822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1346	1	4.8799	4.3799	5.3799	0.74525								0	0	0	0.42693	1	1713	1713		0	0	1				32683	2894	16107	16173	37920	37920					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2379	1	4.9832	4.4832	5.4832	0.74525								0	0	0	0.42693	1	1755	1755		0	0	1				32684	2894	16107	16173	37921	37921					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3349	1	5.0801	4.5801	5.5801	0.74525								0	0	0	0.42693	1	1796	1796		0	0	1				32685	2894	16107	16173	37922	37922					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4267	1	5.169	4.669	5.669	0.74225								0	0	0	0.42693	1	1833	1833		0	0	1				32686	2894	16107	16173	37923	37923					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5191	1	5.2555	4.7555	5.7555	0.73642								0	0	0	0.42693	1	1872	1872		0	0	1				32687	2894	16107	16173	37924	37924					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530090212822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6106	1	5.3471	4.8471	5.8471	0.73642								0	0	0	0.42693	1	1911	1911		0	0	1				32688	2894	16107	16173	37925	37925					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6995	1	5.4359	4.9359	5.9359	0.73642								0	0	0	0.42693	1	1948	1948		0	0	1				32689	2894	16107	16173	37926	37926					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7936	1	5.53	5.03	6.03	0.73642								0	0	0	0.42693	1	1988	1988		0	0	1				32690	2894	16107	16173	37927	37927					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528259158134	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8932	1	5.6296	5.1296	6.1296	0.73642								0	0	0	0.42693	1	2030	2030		0	0	1				32691	2894	16107	16173	37928	37928					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9892	1	5.7257	5.2257	6.2257	0.73642								0	0	0	0.42693	1	2070	2070		0	0	1				32692	2894	16107	16173	37929	37929					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0885	1	5.825	5.325	6.325	0.73642								0	0	0	0.42693	1	2112	2112		0	0	1				32693	2894	16107	16173	37930	37930					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1807	1	5.9171	5.4171	6.4171	0.73642								0	0	0	0.42693	1	2149	2149		0	0	1				32694	2894	16107	16173	37931	37931					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2767	1	6.0132	5.5132	6.5132	0.73642								0	0	0	0.42693	1	2189	2189		0	0	1				32695	2894	16107	16173	37932	37932					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528259158134	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3814	1	6.1178	5.6178	6.6178	0.73642								0	0	0	0.42693	1	2232	2232		0	0	1				32696	2894	16107	16173	37933	37933					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530700564384	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4696	1	6.206	5.706	6.706	0.73642								0	0	0	0.42693	1	2268	2268		0	0	1				32697	2894	16107	16173	37934	37934					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5645	1	6.3009	5.8009	6.8009	0.73642								0	0	0	0.42693	1	2308	2308		0	0	1				32698	2894	16107	16173	37935	37935					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6564	1	6.3871	5.8871	6.8871	0.73074								0	0	0	0.42693	1	2346	2346		0	0	1				32699	2894	16107	16173	37936	37936					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7579	1	6.4886	5.9886	6.9886	0.73074								0	0	0	0.42693	1	2388	2388		0	0	1				32700	2894	16107	16173	37937	37937					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530090212822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8596	1	6.5903	6.0903	7.0903	0.73074								0	0	0	0.42693	1	2430	2430		0	0	1				32701	2894	16107	16173	37938	37938					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527343630791	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9499	1	6.6806	6.1806	7.1806	0.73074								0	0	0	0.42693	1	2468	2468		0	0	1				32702	2894	16107	16173	37939	37939					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528259158134	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0533	1	6.784	6.284	7.284	0.73074								0	0	0	0.42693	1	2511	2511		0	0	1				32703	2894	16107	16173	37940	37940					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1478	1	6.8785	6.3785	7.3785	0.73074								0	0	0	0.42693	1	2550	2550		0	0	1				32704	2894	16107	16173	37941	37941					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2492	1	6.9799	6.4799	7.4799	0.73074								0	0	0	0.42693	1	2593	2593		0	0	1				32705	2894	16107	16173	37942	37942					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3484	1	7.0791	6.5791	7.5791	0.73074								0	0	0	0.42693	1	2634	2634		0	0	1				32706	2894	16107	16173	37943	37943					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529785037041	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4411	1	7.1719	6.6719	7.6719	0.73074								0	0	0	0.42693	1	2673	2673		0	0	1				32707	2894	16107	16173	37944	37944					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528869509697	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5318	1	7.2626	6.7626	7.7626	0.73074								0	0	0	0.42693	1	2711	2711		0	0	1				32708	2894	16107	16173	37945	37945					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530090212822	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6254	1	7.3561	6.8561	7.8561	0.73074								0	0	0	0.42693	1	2751	2751		0	0	1				32709	2894	16107	16173	37946	37946					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529479861259	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7212	1	7.452	6.952	7.952	0.73074								0	0	0	0.42693	1	2791	2791		0	0	1				32710	2894	16107	16173	37947	37947					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2528564333916	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8191	1	7.5498	7.0498	8.0498	0.73074								0	0	0	0.42693	1	2832	2832		0	0	1				32711	2894	16107	16173	37948	37948					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2526733279228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9201	1	7.6508	7.1508	8.1508	0.73074								0	0	0	0.42693	1	2874	2874		0	0	1				32712	2894	16107	16173	37949	37949					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.212	1	36.035	35.535	36.535	1.8227								0	0	0	0.42693	1	14346	14346		0	0	1				32713	2894	16107	16173	37950	37950					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2521850466728	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.821	1	36.639	36.139	37.139	1.8176								0	0	0	0.42693	1	14599	14599		0	0	1				32714	2894	16107	16173	37951	37951					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2525817751884	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.995	1	36.813	36.313	37.313	1.8176								0	0	0	0.42693	1	14672	14672		0	0	1				32715	2894	16107	16173	37952	37952					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2529174685478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.113	1	36.931	36.431	37.431	1.8176								0	0	0	0.42693	1	14723	14723		0	0	1				32716	2894	16107	16173	37953	37953					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2521240115166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.26	1	37.078	36.578	37.578	1.8176								0	0	0	0.42693	1	14785	14785		0	0	1				32717	2894	16107	16173	37954	37954					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532531619072	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.068	1	50.046	49.546	50.546	1.9772								0	0	0	0.42693	1	20133	20133		0	0	1				32718	2894	16107	16173	37955	37955					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534667849541	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.555	1	50.532	50.032	51.032	1.9772								0	0	0	0.42693	1	20338	20338		0	0	1				32719	2894	16107	16173	37956	37956					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2524291872978	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.309	1	53.285	52.785	53.785	1.9753								0	0	0	0.42693	1	21503	21503		0	0	1				32720	2894	16107	16173	37957	37957					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532226443291	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.447	1	53.423	52.923	53.923	1.9753								0	0	0	0.42693	1	21560	21560		0	0	1				32721	2894	16107	16173	37958	37958					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2530395388603	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.572	1	53.547	53.047	54.047	1.9746								0	0	0	0.42693	1	21611	21611		0	0	1				32722	2894	16107	16173	37959	37959					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.818	1	53.79	53.29	54.29	1.9722								0	0	0	0.42693	1	21715	21715		0	0	1				32723	2894	16107	16173	37960	37960					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2532836794853	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.913	1	53.885	53.385	54.385	1.9722								0	0	0	0.42693	1	21755	21755		0	0	1				32724	2894	16107	16173	37961	37961					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2531310915947	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.036	1	54.008	53.508	54.508	1.9722								0	0	0	0.42693	1	21806	21806		0	0	1				32725	2894	16107	16173	37962	37962					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2536498904228	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.126	1	54.098	53.598	54.598	1.9722								0	0	0	0.42693	1	21844	21844		0	0	1				32726	2894	16107	16173	37963	37963					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2524291872978	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.279	1	54.251	53.751	54.751	1.9722								0	0	0	0.42693	1	21906	21906		0	0	1				32727	2894	16107	16173	37964	37964					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2531310915947	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.532	1	54.504	54.004	55.004	1.9722								0	0	0	0.42693	1	22009	22009		0	0	1				32728	2894	16107	16173	37965	37965					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534362673759	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.631	1	54.603	54.103	55.103	1.9722								0	0	0	0.42693	1	22049	22049		0	0	1				32729	2894	16107	16173	37966	37966					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2527953982353	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.724	1	54.697	54.197	55.197	1.9722								0	0	0	0.42693	1	22087	22087		0	0	1				32730	2894	16107	16173	37967	37967					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2526428103447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.823	1	54.792	54.292	55.292	1.9697								0	0	0	0.42693	1	22128	22128		0	0	1				32731	2894	16107	16173	37968	37968					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2534667849541	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.342	1	98.598	98.098	99.098	0.25636								0	0	0	0.42693	1	41384	41384		0	0	1				32732	2894	16107	16173	37969	37969					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2560302615166	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.53	1	101.72	101.22	102.22	0.19076								0	0	0	0.42693	1	42688	42688		0	0	1				32733	2894	16107	16173	37970	37970					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2555724978447	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.64	1	101.83	101.33	102.33	0.19076								0	0	0	0.42693	1	42734	42734		0	0	1				32734	2894	16107	16173	37971	37971					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2548705935478	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.76	1	101.95	101.45	102.45	0.19076								0	0	0	0.42693	1	42783	42783		0	0	1				32735	2894	16107	16173	37972	37972					0.19504787896130438
SRGKKKKKK	9	Unmodified	_SRGKKKKKK_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2520934939384	3	363.252258	1086.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.08	1	102.27	101.77	102.77	0.19076								0	0	0	0.42693	1	42924	42924		0	0	1				32736	2894	16107	16173	37973	37973					0.19504787896130438
SRGPGGGS	8	Unmodified	_SRGPGGGS_					0	0	0		ENST00000568712.1_1_15:79063704-79103562:-|nuORF	ENST00000568712.1_1_15:79063704-79103562:-|nuORF	ENST00000568712.1_1_15:79063704-79103562:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	337.1636840701103	2	337.664452	673.314351	-1.9186	-0.00064786	0.87376	0.00029504	-1.0449	-0.00035282	337.66540092769725	97.462	0.12395	97.462	97.353	97.477	0					6	3	2	0	0	0	2.3239	1	40732	40732		0.6015	0	1	842020			32737	7376	16108	16174	37974	37974					-0.035373320988924206
SRGRSQEY	8	Unmodified	_SRGRSQEY_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1606323122978	3	328.161545	981.462806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.004	1	6.6253	6.1253	7.1253	0.62127								0	0	0	1.0178	1	2480	2480		0.40072	0	1				32738	2894	16109	16175	37975	37975					-0.0286664591585577
SRGRSQEY	8	Unmodified	_SRGRSQEY_					0	0	0		ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	ENSG00000139767|ENST00000267260|SRRM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1603576540947	3	328.161545	981.462806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1955	1	6.8168	6.3168	7.3168	0.62127								0	0	0	1.0178	1	2559	2559		0.40072	0	1				32739	2894	16109	16175	37976	37976					-0.0286664591585577
SRGSPHSSS	9	Unmodified	_SRGSPHSSS_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1416198611259	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7344	1	3.7344	3.2344	4.2344	0								0	0	0	0.42693	1	1534	1534		0.26902	0	1			+	32740	350	16110	16176	37977	37977					-0.04922907841273627
SRGVHGGG	8	Unmodified	_SRGVHGGG_					0	0	0			REV__ENST00000510119.1_1_5:137666906-137673844:-|nuORF	REV__ENST00000510119.1_1_5:137666906-137673844:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	726.3679077029228	1	726.364161	725.356885	2.6385	0.0019165	2.409	0.0017498	5.0475	0.0036663	726.365810007141	104.64	0.13056	104.82	104.75	104.88	0.1731					17	6	4	0	0	0	0.89176	1	44318	44318		0.79363	0	1	46915000	+		32741	13566	16111	16177	37978	37978					-0.016779369706569014
SRIHRREHKRK	11	Unmodified	_SRIHRREHKRK_					0	0	0			REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF	REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.6369201540947	3	501.634424	1501.88144	2.4207	0.0012143	1.155	0.00057939	3.5757	0.0017937	501.63469409452586	88.664	1.1161	88.664	87.999	89.115	0					86	35	3	0	0	0	1.0395	2	36957	36957;37061		0.08335	0.010087	1	1183600	+		32742	9806	16112	16178	37979;37980	37979					0.15057858113891598
SRIHRREHKRK	11	Unmodified	_SRIHRREHKRK_					0	0	0			REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF	REV__ENST00000496432.6_1_1:10713095-10754402:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.6355163455009	3	501.634424	1501.88144	2.177	0.0010921	0.54303	0.0002724	2.7201	0.0013645	501.6345111367571	90.8	1.7886	90.8	89.905	91.693	0					123	56	3	0	0	0	1.0395	4	37712	37712;37864;38062;38128		0.08335	0.08335	1	2114400	+		32743	9806	16112	16178	37981;37982;37983;37984	37981					0.15057858113891598
SRILRVHR	8	Unmodified	_SRILRVHR_					0	0	0		ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000069764|ENST00000438167|PLA2G10	ENSG00000069764|ENST00000438167|PLA2G10	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2201721072197	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.769	1	68.092	67.592	68.592	0.32269								0	0	0	1.0178	1	28373	28373		0.40072	0	1				32744	844	16113	16179	37985	37985					0.12498488513710981
SRKKLGNP	8	Unmodified	_SRKKLGNP_					0	0	0		DNAJC28|p.N315Qfs*3|1|0.06|ENSG00000177692|chr21:33488451-33488452|-/TG|frameshift_variant;ENSG00000177692|ENST00000381947|DNAJC28	DNAJC28|p.N315Qfs*3|1|0.06|ENSG00000177692|chr21:33488451-33488452|-/TG|frameshift_variant	DNAJC28|p.N315Qfs*3|1|0.06|ENSG00000177692|chr21:33488451-33488452|-/TG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2758361697197	2	450.274701	898.534849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.755	1	76.536	76.036	77.036	1.7817								0	0	0	1.0178	1	31357	31357		0.69038	0	1				32745	422	16114	16180	37986	37986					0.08152313228526964
SRKPPRVRRQ	10	Unmodified	_SRKPPRVRRQ_					0	0	0		ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	320.7003967165947	4	320.700906	1278.77452	-2.1291	-0.0006828	1.9912	0.00063857	-0.1379	-4.4224E-05	320.7023020289313	42.799	1.6488	42.799	42.353	44.002	0					207	52	6	0	0	0	0.85617	1	17775	17775		6.1918	5.1783	1	265120000			32746	6098	16115	16181	37987	37987					0.14628307899556603
SRKPPRVRRQ	10	Unmodified	_SRKPPRVRRQ_					0	0	0		ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7010681033134	4	320.700906	1278.77452	1.0696	0.00034303	-1.7637	-0.00056561	-0.69404	-0.00022258	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	0.89588	1	16806	16806		1.9064	0.45126	1	367210000			32747	6098	16115	16181	37988	37988					0.14628307899556603
SRKPPRVRRQ	10	Unmodified	_SRKPPRVRRQ_					0	0	0		ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	ENST00000369683.5_2_10:111667506-111683236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7005187869072	4	320.700906	1278.77452	1.1368	0.00036459	-1.4662	-0.00047022	-0.32938	-0.00010563	320.7013242248906	39.86	1.3301	41.722	41.092	42.422	1.8624					180	42	6	0	0	0	0.89588	1	16545	16545		1.9064	0.45126	1	348870000			32748	6098	16115	16181	37989	37989					0.14628307899556603
SRKRAAAP	8	Unmodified	_SRKRAAAP_					0	0	0		ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	ENSG00000165868|ENST00000369209|HSPA12A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.7591125369072	2	428.759218	855.503883	1.3069	0.00056036	-0.75044	-0.00032176	0.55648	0.0002386	428.75868345445247	81.524	0.50581	81.524	81.288	81.794	0					37	16	3	0	0	0	0.8909	1	33992	33992		2.0598	0	1	6863500			32749	3864	16116	16182	37990	37990					0.07035159914266842
SRKRRYVRRKQ	11	Unmodified	_SRKRRYVRRKQ_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.6502563357353	3	511.650075	1531.92839	2.8964	0.0014819	-2.8899	-0.0014786	0.0065573	3.355E-06	511.98290229782737	98.263	0.11427	98.354	98.286	98.401	0.090881					10	3	4	0	0	0	1.0402	1	41110	41110		0.094841	0.011491	1	27095000	+		32750	9539	16117	16183	37991	37991					0.1837071766506142
SRKRRYVRRKQ	11	Unmodified	_SRKRRYVRRKQ_					0	0	0			REV__ENSG00000119403|ENST00000373896|PHF19	REV__ENSG00000119403|ENST00000373896|PHF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.6508972048759	3	511.650075	1531.92839	3.9114	0.0020013	-2.4703	-0.0012639	1.4411	0.00073734	511.6482985046587	98.135	0.11903	98.362	98.29	98.409	0.22776					11	4	3	0	0	0	1.0402	1	41310	41310		0.094841	0.021578	1	11300000	+		32751	9539	16117	16183	37992	37992					0.1837071766506142
SRKSIPRARPR	11	Unmodified	_SRKSIPRARPR_					0	0	0		ENST00000442528.2_1_11:45825858-45825972:+|nuORF	ENST00000442528.2_1_11:45825858-45825972:+|nuORF	ENST00000442528.2_1_11:45825858-45825972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7065917849541	4	331.70746	1322.80073	-1.7442	-0.00057856	-0.3884	-0.00012883	-2.1326	-0.00070739	331.70730387911135	44.202	0.78959	44.202	43.682	44.472	0					72	24	4	0	0	0	1.0308	1	18463	18463		1.9275	0.71267	1	3789400			32752	6566	16118	16184	37993	37993					0.1522457707101239
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.009	1	6.6303	6.1303	7.1303	0.62127								0	0	0	0.63775	1	2482	2482		0	0	1		+		32753	13571	16119	16185	37994	37994					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1061	1	6.7274	6.2274	7.2274	0.62127								0	0	0	0.63775	1	2521	2521		0	0	1		+		32754	13571	16119	16185	37995	37995					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879577517509	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.198	1	6.8193	6.3193	7.3193	0.62127								0	0	0	0.63775	1	2560	2560		0	0	1		+		32755	13571	16119	16185	37996	37996					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.7161	1	1.4519	0.95188	1.9519	0.73579								0	0	0	0.63775	1	295	295		0	0	1		+		32756	13571	16119	16185	37997	37997					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.90777	1	1.6562	1.1562	2.1562	0.7484								0	0	0	0.63775	1	375	375		0	0	1		+		32757	13571	16119	16185	37998	37998					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888427615166	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0113	1	1.7597	1.2597	2.2597	0.7484								0	0	0	0.63775	1	418	418		0	0	1		+		32758	13571	16119	16185	37999	37999					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1389	1	1.8873	1.3873	2.3873	0.7484								0	0	0	0.63775	1	471	471		0	0	1		+		32759	13571	16119	16185	38000	38000					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2435	1	1.9919	1.4919	2.4919	0.7484								0	0	0	0.63775	1	515	515		0	0	1		+		32760	13571	16119	16185	38001	38001					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3432	1	2.0916	1.5916	2.5916	0.7484								0	0	0	0.63775	1	556	556		0	0	1		+		32761	13571	16119	16185	38002	38002					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882934451103	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9536	1	3.702	3.202	4.202	0.7484								0	0	0	0.63775	1	1225	1225		0	0	1		+		32762	13571	16119	16185	38003	38003					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0657	1	3.8141	3.3141	4.3141	0.7484								0	0	0	0.63775	1	1272	1272		0	0	1		+		32763	13571	16119	16185	38004	38004					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8884765505791	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1695	1	3.9179	3.4179	4.4179	0.7484								0	0	0	0.63775	1	1315	1315		0	0	1		+		32764	13571	16119	16185	38005	38005					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2662	1	4.0114	3.5114	4.5114	0.74525								0	0	0	0.63775	1	1354	1354		0	0	1		+		32765	13571	16119	16185	38006	38006					0.010388276702087751
SRKSNRVNESN	11	Unmodified	_SRKSNRVNESN_					0	0	0			REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	REV__ENST00000511048.1_1_5:139060964-139062454:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2503	1	4.9956	4.4956	5.4956	0.74525								0	0	0	0.63775	1	1760	1760		0	0	1		+		32766	13571	16119	16185	38007	38007					0.010388276702087751
SRKWLTILKN	10	Unmodified	_SRKWLTILKN_					0	0	0			REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	REV__ENST00000479512.5_1_3:50387244-50387426:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	420.2567932009697	3	420.25919	1257.75574	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.21	1	103.39	102.89	103.89	0.18066								0	0	0	0.66222	1	43438	43438		0.69767	0.19171	1		+		32767	13337	16120	16186	38008	38008					0.13717333485124072
SRLAVHRR	8	Unmodified	_SRLAVHRR_					0	0	0		ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant;ENSG00000204611|ENST00000600228|ZNF616	ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	ZNF616|p.G594Dfs*17|1|0.09|ENSG00000204611|chr19:52115383-52115384|-/ACAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2066833376884	3	332.20542	993.59443	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.675	1	70.998	70.498	71.498	0.32359								0	0	0	1.0178	1	29585	29585		1.4819	0	1				32768	5154	16121	16187	38009	38009					0.09737628962568579
SRLEQEIATYR	11	Unmodified	_SRLEQEIATYR_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;CON__P19001	ENSG00000171345|ENST00000361566|KRT19	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2437621951103	3	455.908886	1364.70483	0.87774	0.00040017	1.3391	0.00061052	2.2169	0.0010107	456.2441669268391	25.841	0.30537	27.558	27.427	27.732	1.7167					16	9	2	0	0	0	0.97315	1	10858	10858		2.732	1.0841	1	835190		+	32769	344	16122	16188	38010	38010					0.037063396496023415
SRLGWELF	8	Unmodified	_SRLGWELF_					0	0	0			REV__TMEM139|p.P75Lfs*26|1|0.06|ENSG00000178826|chr7:143286180-143286181|-/TG|frameshift_variant	REV__TMEM139|p.P75Lfs*26|1|0.06|ENSG00000178826|chr7:143286180-143286181|-/TG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2689391970634	2	504.269084	1006.52362	1.1509	0.00058037	-1.9448	-0.00098071	-0.79389	-0.00040033	504.2676361074291	51.864	0.36532	53.261	53.095	53.46	1.3966					24	12	3	0	0	0	0.87106	1	21787	21787		14.582	0	1	4078700	+		32770	11256	16123	16189	38011	38011					0.020614911343727726
SRLPIPHQA	9	Unmodified	_SRLPIPHQA_					0	0	0		ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	ENSG00000157613|ENST00000621158|CREB3L1	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1967651247978	3	340.197931	1017.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.571	1	34.871	34.371	35.371	0.29942								0	0	0	0.42693	1	14520	14520		0.86438	0.46366	1				32771	3477	16124	16190	38012	38012					0.06387984774266897
SRLQFHFV	8	Unmodified	_SRLQFHFV_					0	0	0			REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|351|3|anti-sense	REV__L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|351|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.1906005740166	3	345.190776	1032.5505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.375	1	82.655	82.155	83.155	0.2802								0	0	0	1.0178	1	34445	34445		1.4819	0.28856	1		+		32772	14328	16125	16191	38013	38013					0.03552599745557927
SRLQPPLI	8	Unmodified	_SRLQPPLI_					0	0	0			REV__chr12:110951842-110956239|95|18.2|0.47|5.27|-|2|LINC01404,LINC01404|1	REV__chr12:110951842-110956239|95|18.2|0.47|5.27|-|2|LINC01404,LINC01404|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	462.2874023318291	2	462.287277	922.560001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.298	1	99.298	98.798	99.798	0								0	0	0	1.0178	1	41558	41558		2.0598	0	1		+		32773	8244	16126	16192	38014	38014					0.09562368031083679
SRLQRLLPQP	10	Unmodified	_SRLQRLLPQP_					0	0	0		ENST00000565665.5_1_16:1383676-1389335:+|nuORF	ENST00000565665.5_1_16:1383676-1389335:+|nuORF	ENST00000565665.5_1_16:1383676-1389335:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	403.2475158572197	3	403.247173	1206.71969	3.241	0.0013069	-2.6286	-0.00106	0.61237	0.00024694	403.24614540346977	91.365	0.5256	92.731	92.406	92.932	1.366					50	16	4	0	0	0	0.89803	1	38438	38438		0.56317	0	1	14175000			32774	7355	16127	16193	38015	38015					0.12459876308275852
SRLQRRRQR	9	Unmodified	_SRLQRRRQR_					0	0	0			REV__ENSG00000138061|ENST00000610745|CYP1B1	REV__ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3830444216728	2	628.38196	1254.74937	2.0785	0.0013061	1.0343	0.00064995	3.1129	0.0019561	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.84195	1	33386	33386		1.6526	0	1	6184900	+		32775	10039	16128	16194	38016	38016					0.13218253096965782
SRLQRRRQR	9	Unmodified	_SRLQRRRQR_					0	0	0			REV__ENSG00000138061|ENST00000610745|CYP1B1	REV__ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3840209841728	2	628.38196	1254.74937	1.7095	0.0010742	2.0667	0.0012987	3.7762	0.0023729	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	0.83753	1	33107	33107		1.8442	0	1	7710600	+		32776	10039	16128	16194	38017	38017					0.13218253096965782
SRLRQNPYV	9	Unmodified	_SRLRQNPYV_					0	0	0		ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2113525271416	3	378.21224	1131.61489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.34	1	38.648	38.148	39.148	0.30857								0	0	0	0.42693	1	16131	16131		1.1933	0	1				32777	5762	16129	16195	38018	38018					0.054347548316854954
SRLRQNPYV	9	Unmodified	_SRLRQNPYV_					0	0	0		ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2128173708916	3	378.21224	1131.61489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.659	1	38.968	38.468	39.468	0.30857								0	0	0	0.42693	1	16264	16264		1.1933	0	1				32778	5762	16129	16195	38019	38019					0.054347548316854954
SRLRQNPYV	9	Unmodified	_SRLRQNPYV_					0	0	0		ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	ENST00000302334.2_1_3:133169231-133185801:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2126037478447	3	378.21224	1131.61489	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.495	1	39.808	39.308	40.308	0.31263								0	0	0	0.42693	1	16611	16611		1.1933	0	1				32779	5762	16129	16195	38020	38020					0.054347548316854954
SRLRWHKGLI	10	Unmodified	_SRLRWHKGLI_					0	0	0			REV__nc|ENSG00000127241|P48740|MASP1	REV__nc|ENSG00000127241|P48740|MASP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1960327029228	4	317.195191	1264.75166	0.7908	0.00025084	1.75	0.0005551	2.5408	0.00080594	317.19560125039726	36.489	0.63893	36.79	36.544	37.183	0.30197					150	45	4	0	0	0	0.88278	1	15369	15369		3.3196	1.5774	1	36396000	+		32780	14423	16130	16196	38021	38021					0.12987288782096584
SRLWRLVWPL	10	Unmodified	_SRLWRLVWPL_					0	0	0			REV__ENSG00000179598|ENST00000321560|PLD6	REV__ENSG00000179598|ENST00000321560|PLD6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2010375857353	4	332.201479	1324.77681	-2.0621	-0.00068502	0.45186	0.00015011	-1.6102	-0.00053491	332.2015453961548	35.796	0.42078	35.796	35.558	35.979	0					50	30	2	0	0	0	0.89803	1	15010	15010		0.62683	0	1	7440200	+		32781	11280	16131	16197	38022	38022					0.12741343584639253
SRMKKKKK	8	Unmodified	_SRMKKKKK_					0	0	0			REV__ENST00000367558.5_1_1:182569199-182569457:-|nuORF	REV__ENST00000367558.5_1_1:182569199-182569457:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2283813357353	3	345.226944	1032.659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.44	1	106.49	105.99	106.99	0.05455								0	0	0	1.0178	1	45350	45350		0	0	1		+		32782	12627	16132	16198	38023	38023					0.1439806772434622
SRNHRQLE	8	Unmodified	_SRNHRQLE_					0	0	0			REV__ENSG00000084652|ENST00000373610|TXLNA	REV__ENSG00000084652|ENST00000373610|TXLNA	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.1842834353447	3	347.184573	1038.53189	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.36	1	106.52	106.02	107.02	0.16174								0	0	0	1.0178	1	45477	45477		3.2813	1.6287	1		+		32783	8843	16133	16199	38024	38024					0.014164381037289786
SRPALALA	8	Unmodified	_SRPALALA_					0	0	0			REV__ENST00000559525.1_2_14:103395157-103395536:+|nuORF	REV__ENST00000559525.1_2_14:103395157-103395536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	798.4849731326103	1	798.483214	797.475937	2.7538	0.0021989	-0.047948	-3.8285E-05	2.7059	0.0021606	798.4824720447428	104.48	0.16978	104.54	104.48	104.65	0.056801					15	8	3	0	0	0	0.89051	1	44067	44067		2.3027	0	1	92273000	+		32784	13891	16134	16200	38025	38025					0.0690983693416456
SRPCKILA	8	Unmodified	_SRPCKILA_					0	0	0			REV__tr|A0A7D6W0E7|A0A7D6W0E7_9CLOTDUF1904familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23440PE=4SV=1	REV__tr|A0A7D6W0E7|A0A7D6W0E7_9CLOTDUF1904familyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23440PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	443.7739440798759	2	444.260205	886.505857	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.57	1	104.57	104.07	105.07	0								0	0	0	1.0178	1	44163	44163		4.756	0	1		+		32785	15578	16135	16201	38026	38026					0.0580645260787378
SRPCLPTAQA	10	Unmodified	_SRPCLPTAQA_					0	0	0		nc|ENSG00000205879|Q658T7|FAM90A2P;nc|ENSG00000285814|P0C7W9|FAM90A14;nc|ENSG00000285765|A8MXZ1|FAM90A23;nc|ENSG00000285687|A8MWA6|FAM90A22;nc|ENSG00000254229|A8MX19|FAM90A12;nc|ENSG00000233132|A0A8V8TPE2|FAM90A3;nc|ENSG00000233115|A0A8V8TNH8|FAM90A11;nc|ENSG00000230045|P0C7V4|FAM90A15;nc|ENSG00000223885|P0C7W8|FAM90A13;nc|ENSG00000215373|A8MXJ8|FAM90A5;nc|ENSG00000215354|P0C7X0|FAM90A24;ENSG00000229924|ENST00000512047|FAM90A26;ENSG00000171847|ENST00000538603|FAM90A1	nc|ENSG00000205879|Q658T7|FAM90A2P	nc|ENSG00000205879|Q658T7|FAM90A2P	MSMS	GG20161007_CRH_Patient100_A02_02	2	522.2706786990166	2	522.268758	1042.52296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.1	1	103.17	102.67	103.67	0.062805								0	0	0	0.66087	1	43210	43210		2.9952	0	1				32786	4215	16136	16202	38027	38027					0.0034032842299893673
SRPLLLWP	8	Unmodified	_SRPLLLWP_					0	0	0			REV__ENST00000535299.5_1_12:5541425-5615740:+|nuORF	REV__ENST00000535299.5_1_12:5541425-5615740:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2988464236259	2	491.297645	980.580737	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.895	1	98.123	97.623	98.623	0.22776								0	0	0	1.0178	1	41200	41200		2.3027	0	1		+		32787	12984	16137	16203	38028	38028					0.08966958410746884
SRPLSTGKKTH	11	Unmodified	_SRPLSTGKKTH_					0	0	0		ENST00000502420.1_1_5:177027181-177031484:+|nuORF;ENST00000029410.9_1_5:177027188-177031484:+|nuORF	ENST00000502420.1_1_5:177027181-177031484:+|nuORF	ENST00000502420.1_1_5:177027181-177031484:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3492919802666	2	606.346386	1210.67822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.36	1	105.53	105.03	106.03	0.16679								0	0	0	0.63775	1	44797	44797		4.897	0.95262	1				32788	5497	16138	16204	38029	38029					0.08130695548948097
SRPPTKVER	9	Unmodified	_SRPPTKVER_					0	0	0		ENST00000361288.8_1_6:34855589-34855727:-|nuORF	ENST00000361288.8_1_6:34855589-34855727:-|nuORF	ENST00000361288.8_1_6:34855589-34855727:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	535.3116943240166	2	535.309272	1068.60399	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102	1	102.17	101.67	102.67	0.17032								0	0	0	0.42693	1	42919	42919		3.5965	0	1				32789	6036	16139	16205	38030	38030					0.07243352457408037
SRPVGRGP	8	Unmodified	_SRPVGRGP_					0	0	0			REV__ENSG00000186994|ENST00000330915|KANK3	REV__ENSG00000186994|ENST00000330915|KANK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2395812869072	2	413.238119	824.461684	1.9248	0.00079539	0.65782	0.00027184	2.5826	0.0010672	413.23834179239384	71.698	0.47563	72.022	71.751	72.227	0.32359					40	14	4	0	0	0	0.89178	1	29945	29945		0.69038	0	1	14935000	+		32790	11522	16140	16206	38031	38031					0.04243184505912723
SRPVLTLT	8	Unmodified	_SRPVLTLT_					0	0	0		tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	886.5361205935478	1	886.535643	885.528367	3.1181	0.0027643	-2.2811	-0.0020223	0.83703	0.00074206	886.5338519306889	104.45	0.091354	104.62	104.56	104.65	0.1731					14	4	4	0	0	0	0.89051	1	44207	44207		2.3027	0	1	23150000			32791	16405	16141	16207	38032	38032					0.08102375277132978
SRPVLTLT	8	Unmodified	_SRPVLTLT_					0	0	0		tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	886.535643	885.528367	1.157	0.0010257	1.2481	0.0011065	2.4051	0.0021322	886.5362930014915	104.54	0.072128	104.54	104.49	104.56	0	-0.066279	0.0018275	NaN	2.3027	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16540000			32792	16405	16141	16207							0.08102375277132978
SRPVLTLT	8	Unmodified	_SRPVLTLT_					0	0	0		tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	tr|A0A553SMZ9|A0A553SMZ9_NIACIClassDsortaseOS=NialliacirculansOX=1397GN=CEQ21_23510PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	886.535643	885.528367	3.0036	0.0026628	-0.41029	-0.00036374	2.5933	0.002299	886.5349401323072	104.49	0.072945	104.65	104.6	104.67	0.16055	0.044288	0.00035725	NaN	2.3027	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15011000			32793	16405	16141	16207							0.08102375277132978
SRPVQLFLL	9	Unmodified	_SRPVQLFLL_					0	0	0			REV__ENSG00000164645|ENST00000297203|TEX47	REV__ENSG00000164645|ENST00000297203|TEX47	MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2234374880791	3	358.221965	1071.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.131	1	91.15	90.65	91.65	1.0199								0	0	0	0.42693	1	37979	37979		0.96228	0	1		+		32794	10743	16142	16208	38033	38033					0.11110899127993434
SRPVVIAG	8	Unmodified	_SRPVVIAG_					0	0	0		ENST00000549928.5_1_12:60154925-60173457:+|nuORF;ENSG00000118596|ENST00000547379|SLC16A7	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	798.4847900271416	1	798.483214	797.475937	1.2848	0.0010259	2.0262	0.0016179	3.311	0.0026438	798.4841273353834	104.52	0.12898	104.52	104.46	104.58	0					16	6	3	0	0	0	0.89051	1	44124	44124		2.3027	0	1	90788000			32795	2041	16143	16209	38034	38034					0.06909836934198665
SRPVVIAG	8	Unmodified	_SRPVVIAG_					0	0	0		ENST00000549928.5_1_12:60154925-60173457:+|nuORF;ENSG00000118596|ENST00000547379|SLC16A7	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	798.4846679568291	1	798.483214	797.475937	2.7241	0.0021751	0.86901	0.00069389	3.5931	0.002869	798.4826944362545	104.46	0.12983	104.62	104.54	104.67	0.16055					17	6	4	0	0	0	0.89051	1	44251	44251		2.3027	0	1	99139000			32796	2041	16143	16209	38035	38035					0.06909836934198665
SRPVVIAG	8	Unmodified	_SRPVVIAG_					0	0	0		ENST00000549928.5_1_12:60154925-60173457:+|nuORF;ENSG00000118596|ENST00000547379|SLC16A7	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	798.4843017458916	1	798.483214	797.475937	2.8908	0.0023083	0.01962	1.5666E-05	2.9105	0.0023239	798.4821505450562	104.42	0.12962	104.59	104.52	104.65	0.1731					18	6	4	0	0	0	0.89051	1	44168	44168		2.3027	0	1	102680000			32797	2041	16143	16209	38036	38036					0.06909836934198665
SRPVVIAG	8	Unmodified	_SRPVVIAG_					0	0	0		ENST00000549928.5_1_12:60154925-60173457:+|nuORF;ENSG00000118596|ENST00000547379|SLC16A7	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	ENST00000549928.5_1_12:60154925-60173457:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	798.483214	797.475937	2.7538	0.0021989	-0.047948	-3.8285E-05	2.7059	0.0021606	798.4824720447428	104.48	0.16978	104.54	104.48	104.65	0.056801	-0.027583	-0.00075878	NaN	2.3027	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	92273000			32798	2041	16143	16209							0.06909836934198665
SRQLSLRA	8	Unmodified	_SRQLSLRA_					0	0	0		ENST00000586847.1_1_18:77794393-77797276:+|nuORF	ENST00000586847.1_1_18:77794393-77797276:+|nuORF	ENST00000586847.1_1_18:77794393-77797276:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7788574099541	2	465.777608	929.540663	2.1314	0.00099276	-0.74317	-0.00034615	1.3882	0.0006466	465.7771367971994	77.68	0.52948	77.68	77.44	77.969	0					46	16	4	0	0	0	0.89124	1	32287	32287		1.8442	0	1	18280000			32799	7458	16144	16210	38037	38037					0.07307411740168845
SRRAPPWP	8	Unmodified	_SRRAPPWP_					0	0	0		ENST00000452063.6_1_2:74692055-74692498:-|nuORF	ENST00000452063.6_1_2:74692055-74692498:-|nuORF	ENST00000452063.6_1_2:74692055-74692498:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	483.3083679080009	2	483.767043	965.519533	2.2749	0.0011005	0.51326	0.0002483	2.7881	0.0013488	483.7662767472263	39.055	0.18523	40.351	40.29	40.475	1.2961					6	5	2	0	0	0	2.3239	1	16426	16426		0.79363	0	1	264290			32800	6614	16145	16211	38038	38038					0.03539446431318538
SRRERFTGT	9	Unmodified	_SRRERFTGT_					0	0	0		ENST00000367926.8_1_1:162531547-162535862:+|nuORF	ENST00000367926.8_1_1:162531547-162535862:+|nuORF	ENST00000367926.8_1_1:162531547-162535862:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	555.2942382693291	2	555.294153	1108.57375	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.712	1	57.033	56.533	57.533	0.32103								0	0	0	0.42693	1	23779	23779		2.0598	0	1				32801	6075	16146	16212	38039	38039					0.02380993792235131
SRRKKKGK	8	Unmodified	_SRRKKKGK_					0	0	0			REV__ENST00000524342.5_1_5:133478937-133482209:+|nuORF	REV__ENST00000524342.5_1_5:133478937-133482209:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3327209353447	2	494.330342	986.646131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.65	1	104.82	104.32	105.32	0.1731								0	0	0	1.0178	1	44328	44328		0.69038	0	1		+		32802	13649	16147	16213	38040	38040					0.15227372656465832
SRRKKKVY	8	Unmodified	_SRRKKKVY_					0	0	0		ENST00000486056.1_1_9:35733177-35736720:+|nuORF;nc|ENSG00000107175|O43889-3|CREB3;ENSG00000107175|ENST00000353704|CREB3	ENST00000486056.1_1_9:35733177-35736720:+|nuORF	ENST00000486056.1_1_9:35733177-35736720:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	356.2799255251884	3	355.561092	1063.66145	-1.1964	-0.00042538	-0.48491	-0.00017242	-1.6813	-0.00059779	355.8937852419235	68.988	0.092636	68.988	68.924	69.017	0					4	2	2	0	0	0	2.3239	1	28732	28732		0.35063	0.081612	1	92291			32803	1592	16148	16214	38041	38041					0.13216239453663547
SRRKKTKSLKA	11	Unmodified	_SRRKKTKSLKA_					0	0	0			REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1	REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2852661013603	3	434.949127	1301.82555	3.0945	0.001346	-1.3684	-0.00059517	1.7261	0.00075078	434.9484506115308	94.287	0.56651	94.432	94.165	94.731	0.14493					44	17	4	0	0	0	1.0388	1	39410	39410		0.50596	0.09769	1	9195900	+		32804	8704	16149	16215	38042	38042					0.18671212153753913
SRRKKTKSLKA	11	Unmodified	_SRRKKTKSLKA_					0	0	0			REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1	REV__nc|ENSG00000068784|Q8N5C6-2|SRBD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	435.2852661013603	3	434.949127	1301.82555	3.0945	0.001346	-1.3684	-0.00059517	1.7261	0.00075078	434.9484506115308	94.287	0.56651	94.432	94.165	94.731	0.14493					44	17	4	0	0	0	0.14606	1	39410	39410		0.50596	0.09769	1	9195900	+		32805	8704	16149	16215	38043	38043					0.18671212153753913
SRRKLKTK	8	Unmodified	_SRRKLKTK_					0	0	0			REV__HELZ-SRSF4|1|fusion	REV__HELZ-SRSF4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1016.673510730267	1	1016.66872	1015.66145	3.0758	0.0031271	1.2977	0.0013194	4.3736	0.0044465	1016.6706698916977	106.1	0.10065	106.16	106.1	106.21	0.05455					10	4	3	0	0	0	0.89198	1	45145	45145		0	0	1	24163000	+		32806	14180	16150	16216	38044	38044					0.15424239453670907
SRRKLKTK	8	Unmodified	_SRRKLKTK_					0	0	0			REV__HELZ-SRSF4|1|fusion	REV__HELZ-SRSF4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8403198122978	2	508.838	1015.66145	3.5127	0.0017874	0.73109	0.00037201	4.2438	0.0021594	508.838463062506	107.6	0.24062	107.76	107.62	107.86	0.15781					51	12	5	0	0	0	0.89198	1	46342	46342		0	0	1	2758100000	+		32807	14180	16150	16216	38045	38045					0.15424239453670907
SRRKLKTK	8	Unmodified	_SRRKLKTK_					0	0	0			REV__HELZ-SRSF4|1|fusion	REV__HELZ-SRSF4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1016.672595202923	1	1016.66872	1015.66145	3.1803	0.0032333	0.67789	0.00068919	3.8582	0.0039225	1016.6692873651737	106.05	0.16043	106.21	106.13	106.29	0.16174					26	8	4	0	0	0	0.89198	1	45242	45242		0	0	1	180460000	+		32808	14180	16150	16216	38046	38046					0.15424239453670907
SRRKLKTK	8	Unmodified	_SRRKLKTK_					0	0	0			REV__HELZ-SRSF4|1|fusion	REV__HELZ-SRSF4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1016.672106921673	1	1016.66872	1015.66145	3.1774	0.0032303	0.56634	0.00057578	3.7437	0.0038061	1016.6690314836131	107.57	0.24419	107.73	107.6	107.85	0.15795					44	12	5	0	0	0	0.89198	1	46291	46291		0	0	1	922930000	+		32809	14180	16150	16216	38047	38047					0.15424239453670907
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2457763552666	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.46	1	70.46	69.96	70.96	0								0	0	0	0.42693	1	29344	29344		0.26902	0.033176	1		+		32810	9682	16151	16217	38048	38048					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2495910525322	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.206	1	71.206	70.706	71.706	0								0	0	0	0.42693	1	29655	29655		0.26902	0.033176	1		+		32811	9682	16151	16217	38049	38049					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2507507205009	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.297	1	96.297	95.797	96.797	0								0	0	0	0.42693	1	40257	40257		2.4985	0	1		+		32812	9682	16151	16217	38050	38050					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2500793337822	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.996	1	96.996	96.496	97.496	0								0	0	0	0.42693	1	40549	40549		0.26902	0.033176	1		+		32813	9682	16151	16217	38051	38051					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2477599978447	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.111	1	97.111	96.611	97.611	0								0	0	0	0.42693	1	40598	40598		0.26902	0	1		+		32814	9682	16151	16217	38052	38052					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2497131228447	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.27	1	97.27	96.77	97.77	0								0	0	0	0.42693	1	40667	40667		0.96228	0	1		+		32815	9682	16151	16217	38053	38053					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2448913455009	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.471	1	76.792	76.292	77.292	0.32163								0	0	0	0.42693	1	31984	31984		0.26902	0.033176	1		+		32816	9682	16151	16217	38054	38054					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2503539919853	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.029	1	94.174	93.674	94.674	0.14493								0	0	0	0.42693	1	39356	39356		0.26902	0	1		+		32817	9682	16151	16217	38055	38055					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2492553591728	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.184	1	94.328	93.828	94.828	0.14493								0	0	0	0.42693	1	39419	39419		0.26902	0	1		+		32818	9682	16151	16217	38056	38056					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2499267458916	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.433	1	94.578	94.078	95.078	0.14493								0	0	0	0.42693	1	39524	39524		0.26902	0.033176	1		+		32819	9682	16151	16217	38057	38057					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2501098513603	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.581	1	93.517	93.017	94.017	0.93623								0	0	0	0.42693	1	38982	38982		0.26902	0	1		+		32820	9682	16151	16217	38058	38058					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	378.2494994997978	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.621	1	94.493	93.993	94.993	0.87176								0	0	0	0.42693	1	39398	39398		0.26902	0.1097	1		+		32821	9682	16151	16217	38059	38059					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2506591677666	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.642	1	92.969	92.469	93.469	1.3269								0	0	0	0.42693	1	38589	38589		0.26902	0.033176	1		+		32822	9682	16151	16217	38060	38060					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2505065798759	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.367	1	93.694	93.194	94.194	1.3269								0	0	0	0.42693	1	38881	38881		0.26902	0	1		+		32823	9682	16151	16217	38061	38061					0.1634538552182221
SRRKVLFVK	9	Unmodified	_SRRKVLFVK_					0	0	0			REV__ENSG00000125850|ENST00000278780|OVOL2	REV__ENSG00000125850|ENST00000278780|OVOL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2499267458916	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.828	1	94.105	93.605	94.605	1.277								0	0	0	0.42693	1	39066	39066		0.26902	0	1		+		32824	9682	16151	16217	38062	38062					0.1634538552182221
SRRQISTL	8	Unmodified	_SRRQISTL_					0	0	0		ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	ENST00000374751.7_1_10:35360216-35379558:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7847167849541	2	480.78289	959.551228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.5	1	73.5	73	74	0								0	0	0	1.0178	1	30603	30603		5.7604	0	1				32825	6175	16152	16218	38063	38063					0.06983394394615061
SRRRRHLRRRQ	11	Unmodified	_SRRRRHLRRRQ_					0	0	0			REV__ENST00000215832.10_1_22:22221790-22221904:-|nuORF	REV__ENST00000215832.10_1_22:22221790-22221904:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.6584960818291	3	526.324584	1575.95192	2.9124	0.0015329	-1.3365	-0.00070344	1.5759	0.00082944	526.3240727111456	98.498	0.1173	98.579	98.504	98.621	0.080376					11	4	3	0	0	0	1.0402	1	41218	41218		0.08335	0	1	46443000	+		32826	12063	16153	16219	38064	38064					0.18698576222232077
SRRRRRRRRHG	11	Unmodified	_SRRRRRRRRHG_					0	0	0		ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.2407104372978	4	387.990241	1547.93186	1.5725	0.00061013	0.59875	0.00023231	2.1713	0.00084244	387.99046324832545	38.385	1.6225	38.694	38.424	40.046	0.30857					237	67	5	0	0	0	1.0402	1	16090	16090		0.094841	0	1	17874000			32827	6049	16154	16220	38065	38065					0.17980825282256774
SRRRRRRRRHG	11	Unmodified	_SRRRRRRRRHG_					0	0	0		ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1334411501884	5	310.593648	1547.93186	0.092477	2.8723E-05	0.51309	0.00015936	0.60556	0.00018808	310.5938003222602	35.851	1.0942	37.669	37.402	38.496	1.8176					191	74	4	0	0	0	0.14606	1	14929	14929		0	0	1	30177000			32828	6049	16154	16220	38066	38066					0.17980825282256774
SRRRRRRRRHG	11	Unmodified	_SRRRRRRRRHG_					0	0	0		ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	ENST00000366641.3_1_1:231557623-231557677:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1338989138603	5	310.593648	1547.93186	0.51891	0.00016117	0.56902	0.00017673	1.0879	0.0003379	310.5936268213391	38.604	0.25443	40.441	40.335	40.59	1.8366					11	7	2	0	0	0	0.14606	1	16183	16183		0	0	1	488740			32829	6049	16154	16220	38067	38067					0.17980825282256774
SRRWRRWRWRW	11	Unmodified	_SRRWRRWRWRW_					0	0	0			REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	REV__ENST00000253814.5_1_5:141488387-141511833:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	893.8234741091728	2	893.990532	1785.96651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.1	1	96.502	96.002	97.002	0.40208								0	0	0	0.63775	1	40427	40427		0	0	1		+		32830	12152	16155	16221	38068	38068					0.10496648370371986
SRSARLIRHR	10	Unmodified	_SRSARLIRHR_					0	0	0		ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9215576052666	3	417.921683	1250.74322	0.30477	0.00012737	-0.27685	-0.0001157	0.027926	1.1671E-05	417.92121231746313	31.093	0.63732	31.093	30.928	31.565	0					68	20	4	0	0	0	0.8872	1	13019	13019		2.8433	1.5136	1	7414100			32831	2905	16156	16222	38069	38069					0.12787734865469247
SRSARLIRHR	10	Unmodified	_SRSARLIRHR_					0	0	0		ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6926147341728	4	313.693081	1250.74322	0.46248	0.00014508	-1.3102	-0.00041099	-0.8477	-0.00026592	313.6925895170379	30.427	0.73331	30.713	30.501	31.234	0.2859					103	24	5	0	0	0	0.8872	1	12863	12863		2.8433	1.251	1	22074000			32832	2905	16156	16222	38070	38070					0.12787734865469247
SRSARLIRHR	10	Unmodified	_SRSARLIRHR_					0	0	0		ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9210388064384	3	417.921683	1250.74322	1.4069	0.00058797	-1.8583	-0.00077662	-0.45141	-0.00018865	417.92082682335234	30.375	0.70564	30.661	30.501	31.206	0.2859					76	23	4	0	0	0	0.8872	1	12895	12895		2.8433	1.251	1	6090000			32833	2905	16156	16222	38071	38071					0.12787734865469247
SRSARLIRHR	10	Unmodified	_SRSARLIRHR_					0	0	0		ENST00000566849.5_1_15:43653273-43656590:-|nuORF;nc|ENSG00000140265|Q8IWY8-4|ZSCAN29;nc|ENSG00000140265|Q8IWY8-2|ZSCAN29;ENSG00000140265|ENST00000684362|ZSCAN29	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	ENST00000566849.5_1_15:43653273-43656590:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6924926638603	4	313.693081	1250.74322	-0.34987	-0.00010975	-1.5782	-0.00049507	-1.9281	-0.00060482	313.6925053445977	29.257	0.66803	30.54	30.312	30.98	1.2825					91	21	5	0	0	0	0.88278	2	12262	12213;12262		3.3196	1.5774	1	24092000			32834	2905	16156	16222	38072;38073	38073					0.12787734865469247
SRSCRRRRRLL	11	Unmodified	_SRSCRRRRRLL_					0	0	0		ENST00000295065.9_1_2:32235333-32235450:-|nuORF	ENST00000295065.9_1_2:32235333-32235450:-|nuORF	ENST00000295065.9_1_2:32235333-32235450:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	729.9368163943291	2	729.936577	1457.8586	2.5745	0.0018792	-1.2349	-0.00090138	1.3396	0.00097782	729.9356069423085	88.807	1.2093	89.03	88.406	89.615	0.2236					82	37	3	0	0	0	1.0391	2	37247	37247;37299		1.1933	0	1	1588700			32835	5730	16157	16223	38074;38075	38074					0.14798515724805839
SRSCRRRRRLL	11	Unmodified	_SRSCRRRRRLL_					0	0	0		ENST00000295065.9_1_2:32235333-32235450:-|nuORF	ENST00000295065.9_1_2:32235333-32235450:-|nuORF	ENST00000295065.9_1_2:32235333-32235450:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.9606506228447	3	486.960143	1457.8586	3.3514	0.001632	-2.2937	-0.0011169	1.0577	0.00051506	486.9590517720984	88.921	2.1704	89.144	88.217	90.387	0.2236					163	67	3	0	0	0	1.0391	1	37324	37324		0.40827	0.24894	1	2885200			32836	5730	16157	16223	38076	38076					0.14798515724805839
SRSKKRKVSY	10	Unmodified	_SRSKKRKVSY_					0	0	0			REV__nc|ENSG00000115750|Q53T94-3|TAF1B	REV__nc|ENSG00000115750|Q53T94-3|TAF1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8702270388603	2	619.870028	1237.7255	2.0914	0.0012964	-1.2415	-0.00076954	0.84999	0.00052689	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.89803	1	32962	32962		2.9952	1.6657	1	9211600	+		32837	9451	16158	16224	38077	38077					0.11614974819940471
SRSKKRKVSY	10	Unmodified	_SRSKKRKVSY_					0	0	0			REV__nc|ENSG00000115750|Q53T94-3|TAF1B	REV__nc|ENSG00000115750|Q53T94-3|TAF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8707763552666	2	619.870028	1237.7255	2.3482	0.0014556	-0.38711	-0.00023996	1.961	0.0012156	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.89803	1	32676	32676		2.9952	1.5133	1	8928300	+		32838	9451	16158	16224	38078	38078					0.11614974819940471
SRSKLDKTK	9	Unmodified	_SRSKLDKTK_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.8176757693291	2	531.81693	1061.61931	1.6087	0.00085555	-0.083624	-4.4472E-05	1.5251	0.00081107	531.8167339583721	70.021	2.3367	70.021	69.109	71.446	0					195	74	4	0	0	0	0.83753	2	29181	29181;29288		1.8442	0	1	4456900	+		32839	8180	16159	16225	38079;38080	38079					0.0909621925461579
SRSKLDKTK	9	Unmodified	_SRSKLDKTK_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.8182250857353	2	531.81693	1061.61931	1.4276	0.00075924	1.056	0.00056158	2.4836	0.0013208	531.8172769714151	69.977	2.2092	70.299	69.188	71.397	0.32223					174	70	4	0	0	0	0.83753	1	29201	29201		1.8442	0	1	4584400	+		32840	8180	16159	16225	38081	38081					0.0909621925461579
SRSKMWLLL	9	Unmodified	_SRSKMWLLL_					0	0	0		nc|ENSG00000182333|P07098-4|LIPF;nc|ENSG00000182333|P07098-3|LIPF	nc|ENSG00000182333|P07098-4|LIPF	nc|ENSG00000182333|P07098-4|LIPF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3314697146416	2	567.328619	1132.64269	1.4037	0.00079635	3.0811	0.001748	4.4848	0.0025443	567.3302083958685	72.689	1.6753	72.689	71.636	73.312	0					116	52	3	0	0	0	0.83753	1	30182	30182		1.8442	0	1	2431800			32841	7940	16160	16226	38082	38082					0.0816694176760393
SRSKMWLLL	9	Unmodified	_SRSKMWLLL_					0	0	0		nc|ENSG00000182333|P07098-4|LIPF;nc|ENSG00000182333|P07098-3|LIPF	nc|ENSG00000182333|P07098-4|LIPF	nc|ENSG00000182333|P07098-4|LIPF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3316528201103	2	567.328619	1132.64269	3.5552	0.002017	2.8162	0.0015977	6.3714	0.0036147	567.3299581410433	73.791	1.1302	75.109	74.4	75.53	1.318					95	35	3	0	0	0	0.83753	1	30892	30892		1.8442	0	1	4418700			32842	7940	16160	16226	38083	38083					0.0816694176760393
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8837768435478	2	641.881793	1281.74903	2.0424	0.001311	1.3754	0.00088287	3.4178	0.0021938	641.8826590024304	79.226	1.0114	79.226	78.907	79.918	0					92	32	3	0	0	0	0.89803	1	32993	32993		1.4819	0	1	2934400			32843	4289	16161	16227	38084	38084					0.11942833377111128
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8835327029228	2	641.881793	1281.74903	2.3142	0.0014855	0.031104	1.9965E-05	2.3453	0.0015054	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	0.89803	3	33886	33886;33936;34079		1.4819	0.15237	1	10103000			32844	4289	16161	16227	38085;38086;38087	38085					0.11942833377111128
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8840209841728	2	641.881793	1281.74903	1.9822	0.0012723	0.78116	0.00050141	2.7633	0.0017737	641.8820510835203	81.341	2.8576	81.632	80.778	83.635	0.29056					269	92	4	0	0	0	0.89803	6	33775	33775;33827;33917;34060;34165;34269		1.4819	0.28856	1	11140000			32845	4289	16161	16227	38088;38089;38090;38091;38092;38093	38088					0.11942833377111128
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8851806521416	2	641.881793	1281.74903	2.163	0.0013884	2.7846	0.0017874	4.9477	0.0031758	641.8836429475442	78.151	1.4143	79.432	78.823	80.238	1.2809					100	45	3	0	0	0	0.89803	1	32875	32875		1.4819	0.15237	1	2775700			32846	4289	16161	16227	38094	38094					0.11942833377111128
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8840209841728	2	641.881793	1281.74903	2.4082	0.0015458	1.3503	0.0008667	3.7584	0.0024125	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	0.89803	3	33584	33584;33842;34052		1.4819	0.15237	1	10623000			32847	4289	16161	16227	38095;38096;38097	38095					0.11942833377111128
SRSKRRHRTV	10	Unmodified	_SRSKRRHRTV_					0	0	0		XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant;ENSG00000173578|ENST00000309285|XCR1	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8831664919853	2	641.881793	1281.74903	1.4587	0.0009363	1.8322	0.001176	3.2908	0.0021123	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	0.88579	1	33739	33739		2.9952	1.5133	1	9116700			32848	4289	16161	16227	38098	38098					0.11942833377111128
SRSKRSRRRR	10	Unmodified	_SRSKRSRRRR_					0	0	0			REV__ENSG00000139174|ENST00000345127|PRICKLE1	REV__ENSG00000139174|ENST00000345127|PRICKLE1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	672.4115478396416	2	672.911416	1343.80828	3.6577	0.0024613	-3.124	-0.0021022	0.53373	0.00035916	672.9095248757038	82.089	0.43625	83.302	83.006	83.443	1.2125					22	13	2	0	0	0	0.12556	1	34432	34432		1.4819	0.15237	1	1275500	+		32849	10097	16162	16228	38099	38099					0.1501272939131013
SRSLLSHHKL	10	Unmodified	_SRSLLSHHKL_					0	0	0			REV__ENST00000531709.6_1_11:62566050-62566089:-|nuORF	REV__ENST00000531709.6_1_11:62566050-62566089:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3442870974541	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.86043	1	32073	32073		5.7319	0.50118	1	9601000	+		32850	13715	16163	16229	38100	38100					0.09147016757151505
SRSNLRIPKGK	11	Unmodified	_SRSNLRIPKGK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3834716677666	2	628.383303	1254.75205	2.1238	0.0013346	-1.2793	-0.00080386	0.84458	0.00053072	628.3824234295301	76.999	0.80923	76.999	76.254	77.063	0					36	25	2	0	0	0	1.0366	1	32043	32043		1.1933	0	1	2041900	+		32851	14313	16164	16230	38101	38101					0.13486663711228175
SRSNLRIPKGK	11	Unmodified	_SRSNLRIPKGK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3845092654228	2	628.383303	1254.75205	2.0099	0.001263	-0.69703	-0.000438	1.3129	0.00082499	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	1.0366	1	32217	32217		1.1933	0	1	2978200	+		32852	14313	16164	16230	38102	38102					0.13486663711228175
SRSNLRIPKGK	11	Unmodified	_SRSNLRIPKGK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3834716677666	2	628.383303	1254.75205	1.5916	0.0010001	-1.8269	-0.001148	-0.23527	-0.00014784	628.3820972907522	78.873	0.64691	79.182	78.641	79.288	0.30933					37	20	2	0	0	0	1.0366	1	33009	33009		1.1933	0.59184	1	5235200	+		32853	14313	16164	16230	38103	38103					0.13486663711228175
SRSNLRIPKGK	11	Unmodified	_SRSNLRIPKGK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|125|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3838378787041	2	628.383303	1254.75205	1.7095	0.0010742	-0.070005	-4.399E-05	1.6395	0.0010302	628.3832198903957	79.37	2.3464	79.67	79.279	81.626	0.30047					144	74	2	0	0	0	1.0366	2	33058	33058;33454		1.1933	0.59184	1	7710600	+		32854	14313	16164	16230	38104;38105	38104					0.13486663711228175
SRSPHKRKRN	10	Unmodified	_SRSPHKRKRN_					0	0	0		ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3690063357353	2	633.368518	1264.72248	2.0542	0.001301	0.17185	0.00010885	2.226	0.0014099	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	0.89803	1	32938	32938		1.4819	0	1	2722600			32855	4041	16165	16231	38106	38106					0.10071144485800687
SRSPHKRKRN	10	Unmodified	_SRSPHKRKRN_					0	0	0		ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3705322146416	2	633.368518	1264.72248	2.3357	0.0014794	0.21372	0.00013536	2.5494	0.0016147	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	0.89803	8	33708	33708;33756;33914;33966;34018;34072;34127;34276		1.4819	0	1	11549000			32856	4041	16165	16231	38107;38108;38109;38110;38111;38112;38113;38114	38107					0.10071144485800687
SRSPHKRKRN	10	Unmodified	_SRSPHKRKRN_					0	0	0		ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	ENSG00000168566|ENST00000342415|SNRNP48	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3706542849541	2	633.368518	1264.72248	1.9685	0.0012468	0.74166	0.00046974	2.7101	0.0017165	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	0.89803	5	33803	33803;33855;34011;34062;34388		1.4819	0	1	7751600			32857	4041	16165	16231	38115;38116;38117;38118;38119	38115					0.10071144485800687
SRSPRRLWLR	10	Unmodified	_SRSPRRLWLR_					0	0	0			REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8972045779228	2	663.896912	1325.77927	2.2498	0.0014936	-2.8503	-0.0018923	-0.60049	-0.00039866	663.8951592135703	81.369	1.3111	81.369	80.604	81.915	0					108	42	3	0	0	0	0.89803	1	33823	33823		1.4819	0.28856	1	2804200	+		32858	8276	16166	16232	38120	38120					0.12941192042308103
SRSPRRLWLR	10	Unmodified	_SRSPRRLWLR_					0	0	0			REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8958618044853	2	663.896912	1325.77927	1.9365	0.0012856	-1.5994	-0.0010619	0.33701	0.00022374	663.8956032949152	81.132	1.7839	81.422	80.623	82.407	0.29056					129	57	3	0	0	0	0.89803	1	34015	34015		1.4819	0.15237	1	3097800	+		32859	8276	16166	16232	38121	38121					0.12941192042308103
SRSPRRLWLR	10	Unmodified	_SRSPRRLWLR_					0	0	0			REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8965942263603	2	663.896912	1325.77927	2.3028	0.0015288	-1.3581	-0.00090165	0.94472	0.00062719	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	0.89803	1	34761	34761		1.4819	0.28856	1	5935800	+		32860	8276	16166	16232	38122	38122					0.12941192042308103
SRSPRRLWLR	10	Unmodified	_SRSPRRLWLR_					0	0	0			REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8975097537041	2	663.896912	1325.77927	3.1315	0.002079	-0.99094	-0.00065789	2.1405	0.0014211	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	0.89803	3	34430	34430;34584;34955		1.4819	0.28856	1	4734100	+		32861	8276	16166	16232	38123;38124;38125	38123					0.12941192042308103
SRSPRRLWLR	10	Unmodified	_SRSPRRLWLR_					0	0	0			REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	REV__chr17:50379567-50380312|423|18.38|0.84|4.44|+|2|EME1,EME1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8988525271416	2	663.896912	1325.77927	3.0629	0.0020334	-1.178	-0.00078209	1.8848	0.0012513	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	0.89803	1	34517	34517		1.4819	0.15237	1	4887400	+		32862	8276	16166	16232	38126	38126					0.12941192042308103
SRSRFKGRI	9	Unmodified	_SRSRFKGRI_					0	0	0			REV__tr|A0A7D6VVF3|A0A7D6VVF3_9CLOTRibosomalproteinuS12methylthiotransferaseRimOOS=ClostridiumintestinaleOX=36845GN=rimOPE=3SV=1	REV__tr|A0A7D6VVF3|A0A7D6VVF3_9CLOTRibosomalproteinuS12methylthiotransferaseRimOOS=ClostridiumintestinaleOX=36845GN=rimOPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8312866091728	2	553.830706	1105.64686	1.2785	0.00070807	-0.43451	-0.00024064	0.84399	0.00046743	553.8302911988989	72.644	2.0628	72.644	71.732	73.795	0					175	65	4	0	0	0	0.83753	1	30180	30180		1.8442	0.36234	1	6275300	+		32863	15528	16167	16233	38127	38127					0.09826167305527633
SRSRFKGRI	9	Unmodified	_SRSRFKGRI_					0	0	0			REV__tr|A0A7D6VVF3|A0A7D6VVF3_9CLOTRibosomalproteinuS12methylthiotransferaseRimOOS=ClostridiumintestinaleOX=36845GN=rimOPE=3SV=1	REV__tr|A0A7D6VVF3|A0A7D6VVF3_9CLOTRibosomalproteinuS12methylthiotransferaseRimOOS=ClostridiumintestinaleOX=36845GN=rimOPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8315917849541	2	553.830706	1105.64686	1.9187	0.0010627	-0.46045	-0.00025501	1.4583	0.00080764	553.8302104494187	72.464	2.1267	72.789	71.785	73.912	0.32494					193	67	4	0	0	0	0.83753	1	30137	30137		1.8442	0.36234	1	7300500	+		32864	15528	16167	16233	38128	38128					0.09826167305527633
SRSRHRRRSR	10	Unmodified	_SRSRHRRRSR_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;nc|ENSG00000179335|P49761-2|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3971435427666	2	677.39339	1352.77223	2.4766	0.0016776	3.6369	0.0024636	6.1135	0.0041412	677.3955617934563	84.715	0.47845	84.976	84.726	85.204	0.26083					36	14	3	0	0	0	0.89803	1	35453	35453		1.4819	0	1	2097100			32865	4510	16168	16234	38129	38129					0.1099527221444987
SRSRHRRRSR	10	Unmodified	_SRSRHRRRSR_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;nc|ENSG00000179335|P49761-2|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3958007693291	2	677.39339	1352.77223	2.5056	0.0016973	1.2406	0.0008404	3.7463	0.0025377	677.3942794699842	85.883	0.75523	86.135	85.943	86.699	0.25227					42	24	2	0	0	0	0.89803	1	35974	35974		0.35063	0	1	2135800			32866	4510	16168	16234	38130	38130					0.1099527221444987
SRSRHRRRSR	10	Unmodified	_SRSRHRRRSR_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;nc|ENSG00000179335|P49761-2|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.3967773318291	2	677.39339	1352.77223	1.5971	0.0010819	3.1793	0.0021537	4.7765	0.0032356	677.3953680562546	84.546	1.1548	85.705	85.086	86.241	1.159					67	37	3	0	0	0	0.89803	2	35470	35470;35545		1.4819	0	1	5749300			32867	4510	16168	16234	38131;38132	38131					0.1099527221444987
SRSRHRRRSR	10	Unmodified	_SRSRHRRRSR_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;nc|ENSG00000179335|P49761-2|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3957397341728	2	677.39339	1352.77223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.216	1	85.814	85.314	86.314	1.5987								0	0	0	0.66176	1	35320	35320		1.4819	0	1				32868	4510	16168	16234	38133	38133					0.1099527221444987
SRSRHRRRSR	10	Unmodified	_SRSRHRRRSR_					0	0	0		nc|ENSG00000179335|P49761-3|CLK3;ENSG00000179335|ENST00000395066|CLK3;nc|ENSG00000179335|P49761-2|CLK3;ENST00000454830.6_1_15:74908152-74912599:+|nuORF	nc|ENSG00000179335|P49761-3|CLK3	nc|ENSG00000179335|P49761-3|CLK3	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3954955935478	2	677.39339	1352.77223	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.319	1	85.916	85.416	86.416	1.5962								0	0	0	0.66176	1	35365	35365		1.4819	0	1				32869	4510	16168	16234	38134	38134					0.1099527221444987
SRSRIRRKRE	10	Unmodified	_SRSRIRRKRE_					0	0	0			REV__ENST00000527399.3_1_12:122999727-123005058:-|nuORF	REV__ENST00000527399.3_1_12:122999727-123005058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4100829958916	2	672.408175	1342.8018	1.9383	0.0013033	0.99084	0.00066625	2.9292	0.0019696	672.408867948159	81.206	1.355	81.497	80.561	81.916	0.29056					107	43	3	0	0	0	0.89803	1	33793	33793		1.4819	0	1	2380900	+		32870	9312	16169	16235	38135	38135					0.14410791439922832
SRSRRRRRER	10	Unmodified	_SRSRRRRRER_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.9253417849541	2	707.919772	1413.82499	2.8244	0.0019995	0.39049	0.00027644	3.2149	0.0022759	708.4221315014181	87.173	1.2409	87.173	86.489	87.73	0					84	47	2	0	0	0	0.89803	1	36554	36554		1.4819	1.1749	1	5734100	+		32871	9481	16170	16236	38136	38136					0.13463230277238836
SRSRRRRRER	10	Unmodified	_SRSRRRRRER_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9227172732353	2	707.919772	1413.82499	2.5022	0.0017714	2.9961	0.002121	5.4984	0.0038924	707.9215608420059	84.892	1.2969	85.153	84.501	85.797	0.26083					79	40	3	0	0	0	0.89803	1	35393	35393		1.4819	0.28856	1	1377500	+		32872	9481	16170	16236	38137	38137					0.13463230277238836
SRSRRRRRER	10	Unmodified	_SRSRRRRRER_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9222900271416	2	707.919772	1413.82499	2.5402	0.0017982	2.0607	0.0014588	4.6008	0.003257	707.9210324951113	87.079	1.3768	87.322	87.17	88.547	0.24387					87	46	3	0	0	0	0.89803	1	36550	36550		1.4819	1.1749	1	5000800	+		32873	9481	16170	16236	38138	38138					0.13463230277238836
SRSRRRRRER	10	Unmodified	_SRSRRRRRER_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	707.919772	1413.82499	2.671	0.0018908	3.4343	0.0024312	6.1052	0.004322	707.9211849255861	85.084	1.3599	85.084	84.368	85.728	0	-0.10362	0.00019148	NaN	1.4819	88	42	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1400800	+		32874	9481	16170	16236							0.13463230277238836
SRSRRRRRER	10	Unmodified	_SRSRRRRRER_					0	0	0			REV__ENSG00000116754|ENST00000370949|SRSF11	REV__ENSG00000116754|ENST00000370949|SRSF11	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	707.919772	1413.82499	1.1723	0.00082991	3.5621	0.0025217	4.7345	0.0033516	707.9222876086194	84.137	0.56852	85.325	85.083	85.651	1.1879	0.13757	0.00037252	NaN	1.4819	25	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2080700	+		32875	9481	16170	16236							0.13463230277238836
SRSRRRTI	8	Unmodified	_SRSRRRTI_					0	0	0			REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	REV__nc|ENSG00000167978|Q9UQ35-2|SRRM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3152343630791	2	516.312681	1030.61081	2.9572	0.0015268	3.4646	0.0017888	6.4217	0.0033156	516.3141782251407	82.671	0.55691	84.341	84.017	84.574	1.67					63	17	5	0	0	0	0.89176	1	34697	34697		0.79363	0	1	55490000	+		32876	10889	16171	16237	38139	38139					0.0967271012866604
SRTGLRRLRH	10	Unmodified	_SRTGLRRLRH_					0	0	0		ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron;ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|1|intron;ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|2|intron	ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron	ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	313.6926757693291	4	313.693081	1250.74322	-0.29721	-9.3233E-05	-1.1556	-0.00036251	-1.4528	-0.00045574	313.69266729433843	28.894	0.54902	30.177	29.794	30.343	1.2825					68	17	5	0	0	0	0.89803	1	12105	12105		0.56317	0	1	30056000			32877	469	16172	16238	38140	38140					0.1278773486544651
SRTGLRRLRH	10	Unmodified	_SRTGLRRLRH_					0	0	0		ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron;ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|1|intron;ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|2|intron	ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron	ENSG00000004478.8,FKBP4,chr12,+,I1.1,2795245,2795656|121|17.11|3|intron	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9208251833916	3	417.921683	1250.74322	0.71364	0.00029824	-2.6645	-0.0011135	-1.9508	-0.0008153	417.9204187410362	28.316	0.54719	30.091	29.696	30.243	1.7754					46	17	3	0	0	0	0.89803	1	11764	11764		1.5923	0	1	5925600			32878	469	16172	16238	38141	38141					0.1278773486544651
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6747	1	7.6747	7.1747	8.1747	0								0	0	0	0.63775	1	3155	3155		0	0	1		+		32879	9721	16173	16239	38142	38142					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.087068	1	0.24551	-0.25449	0.74551	0.15844								0	0	0	0.63775	1	36	36		0	0	1		+		32880	9721	16173	16239	38143	38143					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.21911	1	0.37755	-0.12245	0.87755	0.15844								0	0	0	0.63775	1	90	90		0	0	1		+		32881	9721	16173	16239	38144	38144					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8888122439384	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.32988	1	0.48832	-0.011678	0.98832	0.15844								0	0	0	0.63775	1	136	136		0	0	1		+		32882	9721	16173	16239	38145	38145					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887206912041	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.44183	1	0.60027	0.10027	1.1003	0.15844								0	0	0	0.63775	1	181	181		0	0	1		+		32883	9721	16173	16239	38146	38146					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887206912041	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.571	1	0.72944	0.22944	1.2294	0.15844								0	0	0	0.63775	1	234	234		0	0	1		+		32884	9721	16173	16239	38147	38147					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.68271	1	0.84115	0.34115	1.3411	0.15844								0	0	0	0.63775	1	281	281		0	0	1		+		32885	9721	16173	16239	38148	38148					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.80599	1	0.95302	0.45302	1.453	0.14703								0	0	0	0.63775	1	331	331		0	0	1		+		32886	9721	16173	16239	38149	38149					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886291384697	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.91775	1	1.0648	0.56478	1.5648	0.14703								0	0	0	0.63775	1	378	378		0	0	1		+		32887	9721	16173	16239	38150	38150					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886596560478	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0243	1	1.1714	0.67136	1.6714	0.14703								0	0	0	0.63775	1	422	422		0	0	1		+		32888	9721	16173	16239	38151	38151					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883544802666	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4194	1	4.043	3.543	4.543	0.62362								0	0	0	0.63775	1	1412	1412		0	0	1		+		32889	9721	16173	16239	38152	38152					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881103396416	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6306	1	4.2542	3.7542	4.7542	0.62362								0	0	0	0.63775	1	1499	1499		0	0	1		+		32890	9721	16173	16239	38153	38153					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882934451103	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8271	1	5.4484	4.9484	5.9484	0.62127								0	0	0	0.63775	1	1993	1993		0	0	1		+		32891	9721	16173	16239	38154	38154					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9301	1	5.5514	5.0514	6.0514	0.62127								0	0	0	0.63775	1	2035	2035		0	0	1		+		32892	9721	16173	16239	38155	38155					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0371	1	5.6583	5.1583	6.1583	0.62127								0	0	0	0.63775	1	2079	2079		0	0	1		+		32893	9721	16173	16239	38156	38156					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881713747978	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3729	1	5.9942	5.4942	6.4942	0.62127								0	0	0	0.63775	1	2219	2219		0	0	1		+		32894	9721	16173	16239	38157	38157					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881408572197	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5174	1	8.1446	7.6446	8.6446	0.62713								0	0	0	0.63775	1	3111	3111		0	0	1		+		32895	9721	16173	16239	38158	38158					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3568	1	5.102	4.602	5.602	0.74525								0	0	0	0.63775	1	1804	1804		0	0	1		+		32896	9721	16173	16239	38159	38159					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4577	1	5.1941	4.6941	5.6941	0.73642								0	0	0	0.63775	1	1846	1846		0	0	1		+		32897	9721	16173	16239	38160	38160					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9716	1	6.7023	6.2023	7.2023	0.73074								0	0	0	0.63775	1	2477	2477		0	0	1		+		32898	9721	16173	16239	38161	38161					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0747	1	6.8055	6.3055	7.3055	0.73074								0	0	0	0.63775	1	2520	2520		0	0	1		+		32899	9721	16173	16239	38162	38162					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1891	1	6.9199	6.4199	7.4199	0.73074								0	0	0	0.63775	1	2567	2567		0	0	1		+		32900	9721	16173	16239	38163	38163					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886291384697	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1743	1	7.905	7.405	8.405	0.73074								0	0	0	0.63775	1	2980	2980		0	0	1		+		32901	9721	16173	16239	38164	38164					0.010388276701633004
SRTRNAISDRD	11	Unmodified	_SRTRNAISDRD_					0	0	0			REV__nc|ENSG00000127870|Q9Y252-2|RNF6	REV__nc|ENSG00000127870|Q9Y252-2|RNF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885070681572	3	430.888485	1289.64362	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2722	1	8.0029	7.5029	8.5029	0.73074								0	0	0	0.63775	1	3021	3021		0	0	1		+		32902	9721	16173	16239	38165	38165					0.010388276701633004
SRVDFGETT	9	Unmodified	_SRVDFGETT_					0	0	0			REV__ENSG00000197557|ENST00000355689|TTC30A	REV__ENSG00000197557|ENST00000355689|TTC30A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.2966186404228	2	506.240721	1010.46689	3.4198	0.0017312	1.4556	0.00073686	4.8753	0.0024681	506.24134878028457	103.57	0.055939	103.74	103.71	103.77	0.16445					4	2	2	0	0	0	0.11719	1	43699	43699		7.2892	2.5332	1	3600300	+		32903	11680	16174	16240	38166	38166					-0.03792601212808222
SRVFRRKRER	10	Unmodified	_SRVFRRKRER_					0	0	0		ENST00000453426.1_1_6:32811873-32813517:+|nuORF	ENST00000453426.1_1_6:32811873-32813517:+|nuORF	ENST00000453426.1_1_6:32811873-32813517:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	695.4205810427666	2	695.418543	1388.82253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.85	1	104.01	103.51	104.51	0.16055								0	0	0	0.66176	1	43878	43878		1.4819	0.28856	1				32904	6628	16175	16241	38167	38167					0.14367381819602087
SRVKFATS	8	Unmodified	_SRVKFATS_					0	0	0			REV__ENST00000265734.8_1_7:92242157-92242328:-|nuORF	REV__ENST00000265734.8_1_7:92242157-92242328:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2538329958916	2	448.253434	894.492316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.61	1	103.77	103.27	104.27	0.16199								0	0	0	1.0178	1	43711	43711		4.756	2.4533	1		+		32905	12220	16176	16242	38168	38168					0.04084918100284085
SRVKGLGG	8	Unmodified	_SRVKGLGG_					0	0	0		nc|ENSG00000162174|Q7L266-2|ASRGL1;ENSG00000162174|ENST00000415229|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	387.2351257205009	2	387.235045	772.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.87	1	102.87	102.37	103.37	0								0	0	0	1.0178	1	43121	43121		2.3027	0	1				32906	3609	16177	16243	38169	38169					0.06020666274389441
SRVKGLGG	8	Unmodified	_SRVKGLGG_					0	0	0		nc|ENSG00000162174|Q7L266-2|ASRGL1;ENSG00000162174|ENST00000415229|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	387.2361938357353	2	387.235045	772.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.75	1	102.91	102.41	103.41	0.16445								0	0	0	1.0178	1	43277	43277		2.3027	0	1				32907	3609	16177	16243	38170	38170					0.06020666274389441
SRVKGLGG	8	Unmodified	_SRVKGLGG_					0	0	0		nc|ENSG00000162174|Q7L266-2|ASRGL1;ENSG00000162174|ENST00000415229|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	nc|ENSG00000162174|Q7L266-2|ASRGL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	387.2365295290947	2	387.235045	772.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.65	1	102.83	102.33	103.33	0.18066								0	0	0	1.0178	1	43187	43187		2.3027	0	1				32908	3609	16177	16243	38171	38171					0.06020666274389441
SRVPALVL	8	Unmodified	_SRVPALVL_					0	0	0			REV__ENSG00000183172|ENST00000331479|SMDT1	REV__ENSG00000183172|ENST00000331479|SMDT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	854.5458862185478	1	854.545814	853.538538	2.9751	0.0025423	-2.0095	-0.0017172	0.96555	0.0008251	854.5444611995789	107.51	0.13152	107.67	107.6	107.73	0.15781					12	6	2	0	0	0	0.88958	1	46287	46287		2.8892	0	1	25464000	+		32909	11379	16178	16244	38172	38172					0.10590983002373378
SRVPALVL	8	Unmodified	_SRVPALVL_					0	0	0			REV__ENSG00000183172|ENST00000331479|SMDT1	REV__ENSG00000183172|ENST00000331479|SMDT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	854.545814	853.538538	2.787	0.0023816	-1.9121	-0.001634	0.87485	0.0007476	854.5440307119479	107.72	0.37283	107.77	107.52	107.89	0.052452	0.051492	-0.00060089	NaN	2.8892	45	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23895000	+		32910	11379	16178	16244							0.10590983002373378
SRVPALVL	8	Unmodified	_SRVPALVL_					0	0	0			REV__ENSG00000183172|ENST00000331479|SMDT1	REV__ENSG00000183172|ENST00000331479|SMDT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	854.545814	853.538538	2.9751	0.0025423	-2.0095	-0.0017172	0.96555	0.0008251	854.5444611995789	107.51	0.13152	107.67	107.6	107.73	0.15781	-0.05468	-0.0006841	NaN	2.8892	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25464000	+		32911	11379	16178	16244							0.10590983002373378
SRVPALVL	8	Unmodified	_SRVPALVL_					0	0	0			REV__ENSG00000183172|ENST00000331479|SMDT1	REV__ENSG00000183172|ENST00000331479|SMDT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	854.545814	853.538538	3.0804	0.0026324	-1.3616	-0.0011635	1.7188	0.0014688	854.5445130614786	107.51	0.13574	107.67	107.58	107.72	0.15795	-0.053454	-0.00013042	NaN	2.8892	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16627000	+		32912	11379	16178	16244							0.10590983002373378
SRVQRLGLP	9	Unmodified	_SRVQRLGLP_					0	0	0		nc|ENSG00000142513|Q9BZG2-2|ACP4;ENSG00000142513|ENST00000270593|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	nc|ENSG00000142513|Q9BZG2-2|ACP4	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.5464050173759	3	342.545331	1024.61416	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.835	1	35.134	34.634	35.634	0.29942								0	0	0	0.42089	1	14632	14632		4.1895	0	1				32913	2997	16179	16245	38173	38173					0.10283960182664487
SRVRFIHI	8	Unmodified	_SRVRFIHI_					0	0	0			REV__ENSG00000169871|ENST00000306085|TRIM56	REV__ENSG00000169871|ENST00000306085|TRIM56	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2111999392509	3	343.210171	1026.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.13	1	102.3	101.8	102.8	0.17032								0	0	0	1.0178	1	42981	42981		1.4819	0	1		+		32914	10965	16180	16246	38174	38174					0.0964428139084248
SRVSSGKK	8	Unmodified	_SRVSSGKK_					0	0	0		DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant;DNAJC14|p.E519Vfs*9|1|0.04|ENSG00000135392|chr12:55823148-55823149|-/A|frameshift_variant;ENSG00000135392|ENST00000678005|DNAJC14	DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant	DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7504455447197	2	424.751059	847.487565	0.056353	2.3936E-05	0.20874	8.8662E-05	0.26509	0.0001126	424.7510203927051	21.331	0.21734	21.331	21.221	21.439	0					14	6	3	0	0	0	0.89178	1	8876	8876		0.69038	0	1	970500			32915	421	16181	16247	38175	38175					0.05772033957532585
SRVSSGKK	8	Unmodified	_SRVSSGKK_					0	0	0		DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant;DNAJC14|p.E519Vfs*9|1|0.04|ENSG00000135392|chr12:55823148-55823149|-/A|frameshift_variant;ENSG00000135392|ENST00000678005|DNAJC14	DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant	DNAJC14|p.Q406Lfs*4|1|0.14|ENSG00000135392|chr12:55827442-55827443|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7509338259697	2	424.751059	847.487565	0.1584	6.7282E-05	0.016863	7.1628E-06	0.17527	7.4444E-05	424.75105426668466	23.603	0.27323	23.603	23.475	23.748	0					19	8	3	0	0	0	0.89178	1	9878	9878		0.69038	0	1	1554500			32916	421	16181	16247	38176	38176					0.05772033957532585
SRVTWQSL	8	Unmodified	_SRVTWQSL_					0	0	0			REV__ENSG00000242689|ENST00000361987|CNTF	REV__ENSG00000242689|ENST00000361987|CNTF	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7664367556572	2	488.764166	975.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.305	1	81.04	80.54	81.54	1.735								0	0	0	1.0178	1	33260	33260		16.942	1.0951	1		+		32917	11927	16182	16248	38177	38177					0.025043031290124418
SRVTYITH	8	Unmodified	_SRVTYITH_					0	0	0			REV__ENSG00000150893|ENST00000280481|FREM2	REV__ENSG00000150893|ENST00000280481|FREM2	MSMS	GG20161007_CRH_Patient100_A02_01	1	488.7672607302666	2	488.764166	975.513779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.17	1	81.17	80.67	81.67	0								0	0	0	1.0178	1	33800	33800		12.532	1.7076	1		+		32918	10392	16183	16249	38178	38178					0.025043031289897044
SRWIRDPR	8	Unmodified	_SRWIRDPR_					0	0	0			REV__ENST00000400249.6_1_22:32215205-32217601:+|nuORF	REV__ENST00000400249.6_1_22:32215205-32217601:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3028442263603	2	543.301781	1084.58901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.574	1	41.574	41.074	42.074	0								0	0	0	1.0178	1	17405	17405		2.0598	0	1		+		32919	12879	16184	16250	38179	38179					0.050099053800977345
SSCCGYGH	8	Unmodified	_SSCCGYGH_					0	0	0		ENSG00000186930|ENST00000334897|KRTAP6-2	ENSG00000186930|ENST00000334897|KRTAP6-2	ENSG00000186930|ENST00000334897|KRTAP6-2	MSMS	GG20161007_CRH_Patient100_A02_01	1	407.1361572146416	2	407.136356	812.258158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4265	1	4.4265	3.9265	4.9265	0								0	0	0	1.0178	1	1819	1819		0.79363	0.79363	1				32920	4811	16185	16251	38180	38180					-0.1554804432223591
SSDGEINET	9	Unmodified	_SSDGEINET_					0	0	0			REV__ENSG00000105929|ENST00000310018|ATP6V0A4	REV__ENSG00000105929|ENST00000310018|ATP6V0A4	MSMS	GG20161007_CRH_Patient100_W632_01	3	476.2021667361259	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.69	1	101.86	101.36	102.36	0.17032								0	0	0	0.42693	1	42786	42786		2.0598	0	1		+		32921	9198	16186	16252	38181	38181					-0.09429177100378183
SSDSCGTG	8	Unmodified	_SSDSCGTG_					0	0	0			REV__nc|ENSG00000123572|Q7Z2Y5-3|NRK	REV__nc|ENSG00000123572|Q7Z2Y5-3|NRK	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.1246215701103	2	357.123968	712.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.049	1	63.049	62.549	63.549	0								0	0	0	1.0178	1	26287	26287		0	0	1		+		32922	14422	16187	16253	38182	38182					-0.13424400923952362
SSEEVILKD	9	Unmodified	_SSEEVILKD_					0	0	0		ENSG00000159445|ENST00000368814|THEM4	ENSG00000159445|ENST00000368814|THEM4	ENSG00000159445|ENST00000368814|THEM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2659179568291	2	510.266404	1018.51826	1.2847	0.00065553	-0.73036	-0.00037268	0.55432	0.00028285	510.26571132687434	20.968	0.26294	22.094	21.984	22.247	1.1254					14	8	3	0	0	0	0.093705	1	8738	8738		51.415	27.395	1	827040			32923	3529	16188	16254	38183	38183					0.009737227612617971
SSEEVILKD	9	Unmodified	_SSEEVILKD_					0	0	0		ENSG00000159445|ENST00000368814|THEM4	ENSG00000159445|ENST00000368814|THEM4	ENSG00000159445|ENST00000368814|THEM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2673522830009	2	510.266404	1018.51826	0.71813	0.00036644	0.50364	0.00025699	1.2218	0.00062343	510.2668635006457	20.55	0.32359	22.125	21.969	22.293	1.5748					13	10	2	0	0	0	0.16434	1	8550	8550		37.075	19.962	1	768450			32924	3529	16188	16254	38184	38184					0.009737227612617971
SSERCNKRKQV	11	Unmodified	_SSERCNKRKQV_					0	0	0			REV__ENST00000440088.5_1_7:77325266-77325488:-|nuORF	REV__ENST00000440088.5_1_7:77325266-77325488:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	667.8521606326103	2	667.851509	1333.68847	1.6675	0.0011137	-0.032358	-2.161E-05	1.6352	0.0010921	667.8513614251668	48.072	0.20307	48.402	48.259	48.462	0.33034					10	6	2	0	0	0	0.95983	1	20163	20163		6.2058	0.47393	1	533940	+		32925	13079	16189	16255	38185	38185					0.03496935211865093
SSFARCPWP	9	Unmodified	_SSFARCPWP_					0	0	0			REV__ENST00000007414.7_1_17:45884928-45885519:-|nuORF	REV__ENST00000007414.7_1_17:45884928-45885519:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.8327514529228	3	350.832372	1049.47529	0.67632	0.00023728	-0.3447	-0.00012093	0.33162	0.00011634	350.83235317375835	67.701	0.7023	69.079	68.789	69.491	1.3778					72	22	4	0	0	0	0.6131	1	28489	28489		10.8	0	1	21560000	+		32926	12037	16190	16256	38186	38186					-0.04747325777179867
SSFPTVVIY	9	Unmodified	_SSFPTVVIY_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.537585437298	1	1012.53497	1011.5277	1.5351	0.0015544	0.27796	0.00028145	1.8131	0.0018358	1012.5352560746998	67.672	0.85576	69.05	68.789	69.645	1.3778					117	27	6	0	0	0	0.059546	4	28353	28353;28457;28535;28583		64.236	8.3885	1	234940000			32927	5054	16191	16257	38187;38188;38189;38190	38187					0.022395358374296848
SSFPTVVIY	9	Unmodified	_SSFPTVVIY_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7729675173759	2	506.771126	1011.5277	2.2308	0.0011305	0.219	0.00011098	2.4498	0.0012415	506.77130275742985	67.733	0.79601	69.111	68.757	69.553	1.3778					83	25	4	0	0	0	0.051699	4	28366	28366;28418;28470;28509		67.344	38.857	1	126920000			32928	5054	16191	16257	38191;38192;38193;38194	38191					0.022395358374296848
SSFPTVVIY	9	Unmodified	_SSFPTVVIY_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.535205066204	1	1012.53497	1011.5277	1.2418	0.0012574	-0.042445	-4.2977E-05	1.1994	0.0012144	1012.5349966761479	67.145	0.86556	69.034	68.764	69.63	1.8889					100	27	5	0	0	0	0.059546	3	28221	28106;28221;28344		64.236	9.4628	1	238560000			32929	5054	16191	16257	38195;38196;38197	38196					0.022395358374296848
SSFPTVVIY	9	Unmodified	_SSFPTVVIY_					0	0	0		nc|ENSG00000198522|Q9HCN4-3|GPN1;nc|ENSG00000198522|Q9HCN4-2|GPN1;nc|ENSG00000198522|Q9HCN4-4|GPN1;ENSG00000198522|ENST00000610189|GPN1;nc|ENSG00000198522|Q9HCN4-5|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	nc|ENSG00000198522|Q9HCN4-3|GPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7716552615166	2	506.771126	1011.5277	1.2652	0.00064118	0.68196	0.0003456	1.9472	0.00098678	506.77146743706186	67.236	0.7404	69.125	68.797	69.538	1.8889					81	23	5	0	0	0	0.09539	3	28222	28170;28222;28274		50.855	14.811	1	84871000			32930	5054	16191	16257	38198;38199;38200	38199					0.022395358374296848
SSGGSGQR	8	Unmodified	_SSGGSGQR_					0	0	0			REV__ENSG00000188282|ENST00000697321|RUFY4	REV__ENSG00000188282|ENST00000697321|RUFY4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	735.3388549685478	1	735.338006	734.33073	1.7308	0.0012727	-0.16449	-0.00012096	1.5663	0.0011517	735.3394240115939	45.114	0.41451	45.441	45.279	45.693	0.32674					16	13	2	0	0	0	0.89051	1	18958	18958		2.3027	0	1	299830	+		32931	11565	16192	16258	38201	38201					-0.047062509328043234
SSGNDRDS	8	Unmodified	_SSGNDRDS_					0	0	0		ENST00000590083.5_1_19:1229180-1230152:-|nuORF;ENSG00000099625|ENST00000650044|CBARP	ENST00000590083.5_1_19:1229180-1230152:-|nuORF	ENST00000590083.5_1_19:1229180-1230152:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.1715576052666	2	419.170296	836.326038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.21	1	101.38	100.88	101.88	0.17032								0	0	0	1.0178	1	42589	42589		2.3027	0	1				32932	1212	16193	16259	38202	38202					-0.09867179866228071
SSGPLRRF	8	Unmodified	_SSGPLRRF_					0	0	0		ENST00000449283.1_1_X:140084769-140084832:+|nuORF	ENST00000449283.1_1_X:140084769-140084832:+|nuORF	ENST00000449283.1_1_X:140084769-140084832:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	460.2576782107353	2	460.259051	918.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.15	1	104.31	103.81	104.81	0.16055								0	0	0	1.0178	1	44065	44065		2.5775	0	1				32933	6598	16194	16260	38203	38203					0.04103740194409511
SSGSCASHSPC	11	Unmodified	_SSGSCASHSPC_					0	0	0		PHLDB1|p.S273C|2|0.2|ENSG00000019144|chr11:118627640-118627640|A/T|missense_variant	PHLDB1|p.S273C|2|0.2|ENSG00000019144|chr11:118627640-118627640|A/T|missense_variant	PHLDB1|p.S273C|2|0.2|ENSG00000019144|chr11:118627640-118627640|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.6878539919853	2	511.686941	1021.35933	3.0696	0.0015707	-2.3122	-0.0011831	0.7574	0.00038755	511.68624832893613	72.468	0.46968	74.278	74.042	74.512	1.8101					92	14	9	0	0	0	0.91768	1	30465	30465		8.7454	0.15213	1	29872000			32934	8051	16195	16261	38204	38204					-0.15049637410197647
SSHPNSTS	8	Unmodified	_SSHPNSTS_					0	0	0		ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	ENSG00000121060|ENST00000316881|TRIM25	ENSG00000121060|ENST00000316881|TRIM25	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.6764709353447	2	408.677756	815.34096	0.85943	0.00035123	-3.2108	-0.0013122	-2.3514	-0.00096097	408.67623878514036	62.444	0.34231	62.444	62.242	62.584	0					19	10	2	0	0	0	0.89178	2	26004	26004;26056		0.69038	0	1	1260600			32935	2127	16196	16262	38205;38206	38205					-0.07409687998233494
SSHPNSTS	8	Unmodified	_SSHPNSTS_					0	0	0		ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	ENSG00000121060|ENST00000316881|TRIM25	ENSG00000121060|ENST00000316881|TRIM25	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	408.677756	815.34096	2.774	0.0011337	-3.8098	-0.001557	-1.0358	-0.00042332	408.6752527122151	61.268	0.27145	62.685	62.503	62.774	1.4177	0.053063	1.9446E-05	NaN	0.69038	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	700300			32936	2127	16196	16262							-0.07409687998233494
SSHPNSTS	8	Unmodified	_SSHPNSTS_					0	0	0		ENSG00000121060|ENST00000316881|TRIM25;ENST00000572021.5_1_17:54969063-54989474:-|nuORF	ENSG00000121060|ENST00000316881|TRIM25	ENSG00000121060|ENST00000316881|TRIM25	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	408.677756	815.34096	2.8477	0.0011638	-3.728	-0.0015235	-0.88028	-0.00035975	408.67570343124856	60.856	0.2129	62.822	62.668	62.881	1.9653	0.1895	8.6341E-05	NaN	0.69038	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	591920			32937	2127	16196	16262							-0.07409687998233494
SSHVLLLL	8	Unmodified	_SSHVLLLL_					0	0	0		ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	441.1544982790947	2	441.276378	880.538203	0.8687	0.00038334	0.45814	0.00020217	1.3268	0.0005855	441.27525908731644	107.75	0.25766	107.75	107.58	107.84	0					26	13	3	0	0	0	2.3239	1	46160	46160		0	0	1	15111000			32938	6421	16197	16263	38207	38207					0.09315563282541461
SSHVLLLL	8	Unmodified	_SSHVLLLL_					0	0	0		ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	441.276378	880.538203	3.2168	0.0014195	-1.7082	-0.00075377	1.5086	0.00066573	441.2744634885056	107.71	0.20044	107.77	107.64	107.84	0.052444	-0.036609	-9.6119E-05	NaN	0	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12263000			32939	6421	16197	16263							0.09315563282541461
SSHVLLLL	8	Unmodified	_SSHVLLLL_					0	0	0		ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	ENST00000417868.1_1_1:153824935-153825106:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	441.276378	880.538203	3.3553	0.0014806	-1.6607	-0.00073281	1.6947	0.00074782	441.27531960806334	107.67	0.23916	107.83	107.7	107.94	0.15796	0.022072	-5.4204E-05	NaN	0	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23337000			32940	6421	16197	16263							0.09315563282541461
SSIRRLSTRRR	11	Unmodified	_SSIRRLSTRRR_					0	0	0		ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	694.3492309451103	2	694.421282	1386.82801	2.5663	0.0017821	-1.0042	-0.00069731	1.5621	0.0010848	694.4198482719552	84.011	0.4919	84.011	83.908	84.399	0					19	15	2	0	0	0	0.14606	1	34977	34977		5.2969	0	1	820790			32941	5437	16198	16264	38208	38208					0.1500706061137862
SSIRRLSTRRR	11	Unmodified	_SSIRRLSTRRR_					0	0	0		ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	694.3533813357353	2	694.421282	1386.82801	2.4561	0.0017056	-0.15787	-0.00010963	2.2982	0.0015959	694.4206800655038	83.197	0.85984	83.197	82.861	83.721	0					54	27	3	0	0	0	0.14606	1	34877	34877		5.2969	0	1	1740400			32942	5437	16198	16264	38209	38209					0.1500706061137862
SSIRRLSTRRR	11	Unmodified	_SSIRRLSTRRR_					0	0	0		ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	694.421282	1386.82801	3.4831	0.0024188	-1.4432	-0.0010022	2.0399	0.0014165	694.4193044419042	82.328	0.59619	83.541	83.038	83.634	1.2125	0.17976	-0.0017245	NaN	5.2969	31	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1134000			32943	5437	16198	16264							0.1500706061137862
SSIRRLSTRRR	11	Unmodified	_SSIRRLSTRRR_					0	0	0		ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	ENSG00000266964|ENST00000351325|FXYD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	694.421282	1386.82801	3.1511	0.0021882	-0.29376	-0.00020399	2.8574	0.0019842	694.4204815238346	81.871	0.65909	83.541	83.264	83.923	1.67	0.17943	-0.00012808	NaN	5.2969	24	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	966090			32944	5437	16198	16264							0.1500706061137862
SSKRRAVL	8	Unmodified	_SSKRRAVL_					0	0	0		nc|ENSG00000291071|Q05BU3|FAM86JP	nc|ENSG00000291071|Q05BU3|FAM86JP	nc|ENSG00000291071|Q05BU3|FAM86JP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.7894470095634	2	458.787976	915.561398	2.9836	0.0013688	-0.30496	-0.00013991	2.6786	0.0012289	458.78787905775437	75.173	1.3875	76.48	75.966	77.354	1.3063					107	44	6	0	0	0	0.8909	4	31501	31501;31551;31590;31629		2.0598	0	1	139600000			32945	8022	16199	16265	38210;38211;38212;38213	38210					0.10024002119837405
SSKRRAVL	8	Unmodified	_SSKRRAVL_					0	0	0		nc|ENSG00000291071|Q05BU3|FAM86JP	nc|ENSG00000291071|Q05BU3|FAM86JP	nc|ENSG00000291071|Q05BU3|FAM86JP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	458.7892028689384	2	458.787976	915.561398	3.05	0.0013993	-0.77567	-0.00035587	2.2743	0.0010434	458.7876834135038	74.842	1.2207	76.624	75.914	77.135	1.7817					103	38	6	0	0	0	0.89178	3	31356	31356;31393;31432		0.69038	0	1	145970000			32946	8022	16199	16265	38214;38215;38216	38214					0.10024002119837405
SSLEIMQH	8	Unmodified	_SSLEIMQH_					0	0	0			REV__ENSG00000165868|ENST00000369209|HSPA12A	REV__ENSG00000165868|ENST00000369209|HSPA12A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7280456423759	2	472.728935	943.443317	1.9415	0.00091782	-4.4216	-0.0020902	-2.4801	-0.0011724	472.72677996101436	33.19	0.29916	33.19	33.06	33.359	0					13	10	2	0	0	0	0.87276	1	13919	13919		13.508	1.8676	1	774070	+		32947	10801	16200	16266	38217	38217					-0.030667382509818708
SSLKKIILW	9	Unmodified	_SSLKKIILW_					0	0	0		ENST00000591790.5_1_19:56983437-56983554:-|nuORF	ENST00000591790.5_1_19:56983437-56983554:-|nuORF	ENST00000591790.5_1_19:56983437-56983554:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	544.3504516482353	2	544.347335	1086.68012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.77	1	101.77	101.27	102.27	0								0	0	0	0.42693	1	42618	42618		1.8442	0	1				32948	7490	16201	16267	38218	38218					0.1402435630486707
SSLPKITP	8	Unmodified	_SSLPKITP_					0	0	0		ENSG00000196169|ENST00000389916|KIF19	ENSG00000196169|ENST00000389916|KIF19	ENSG00000196169|ENST00000389916|KIF19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7520629763603	2	421.752736	841.490919	0.70976	0.00029934	-2.7924	-0.0011777	-2.0826	-0.00087835	421.75135351229454	71.067	0.83904	71.067	70.449	71.288	0					54	26	3	0	0	0	0.89051	1	29608	29608		2.3027	0	1	4428000			32949	4919	16202	16268	38219	38219					0.06383284011508294
SSMDSLMYPK	10	Unmodified	_SSMDSLMYPK_					0	0	0		ENST00000589799.5_1_19:44740380-44740701:-|nuORF	ENST00000589799.5_1_19:44740380-44740701:-|nuORF	ENST00000589799.5_1_19:44740380-44740701:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	387.1514465212822	3	386.843837	1157.50968	-1.2537	-0.00048497	-0.90337	-0.00034946	-2.157	-0.00083444	386.8435525478071	15.819	1.8813	15.819	15.28	17.161	0					82	59	2	0	0	0	0.12551	1	6356	6356		0.56317	0	1	749440			32950	7477	16203	16269	38220	38220					-0.06277290471234664
SSMPPPMF	8	Unmodified	_SSMPPPMF_					0	0	0			REV__ENST00000507175.5_1_5:145826912-145859658:+|nuORF	REV__ENST00000507175.5_1_5:145826912-145859658:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	447.2009155154228	2	447.198425	892.382296	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.47	1	102.64	102.14	103.14	0.16445								0	0	0	1.0178	1	43137	43137		0.79363	0	1		+		32951	9390	16204	16270	38221	38221					-0.06819966554758139
SSNNSSSS	8	Unmodified	_SSNNSSSS_					0	0	0		ENST00000524717.5_1_11:95825156-95825615:-|nuORF	REV__ENST00000524717.5_1_11:95825156-95825615:-|nuORF	REV__ENST00000524717.5_1_11:95825156-95825615:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1519958376884	2	385.151571	768.28859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.89	1	106.06	105.56	106.56	0.16679								0	0	0	1.0178	1	45155	45155		0.69038	0	1				32952	7111	16205	16271	38222	38222					-0.10482271131832022
SSPGSPDTA	9	Unmodified	_SSPGSPDTA_					0	0	0		ENST00000519604.5_1_20:61919777-61919975:+|nuORF	ENST00000519604.5_1_20:61919777-61919975:+|nuORF	ENST00000519604.5_1_20:61919777-61919975:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	818.3589965701103	1	818.352653	817.345377	2.8114	0.0023007	2.4436	0.0019997	5.255	0.0043004	818.3542607892668	105.98	0.1209	106.14	106.06	106.18	0.15859					9	5	2	0	0	0	0.7849	1	45273	45273		3.9444	1.3669	1	11566000			32953	7070	16206	16272	38223	38223					-0.07060223575331293
SSPGSPDTA	9	Unmodified	_SSPGSPDTA_					0	0	0		ENST00000519604.5_1_20:61919777-61919975:+|nuORF	ENST00000519604.5_1_20:61919777-61919975:+|nuORF	ENST00000519604.5_1_20:61919777-61919975:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	818.352653	817.345377	2.9565	0.0024194	2.1949	0.0017962	5.1514	0.0042157	818.3540113564122	105.96	0.12238	106.12	106.03	106.15	0.16679	0.0219	-0.0024172	NaN	3.9444	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11259000			32954	7070	16206	16272							-0.07060223575331293
SSPGSPVIL	9	Unmodified	_SSPGSPVIL_					0	0	0		nc|ENSG00000100626|Q8N428-2|GALNT16;ENSG00000100626|ENST00000448469|GALNT16	nc|ENSG00000100626|Q8N428-2|GALNT16	nc|ENSG00000100626|Q8N428-2|GALNT16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.7410156130791	2	428.742368	855.470183	1.0445	0.00044782	-3.0366	-0.0013019	-1.9921	-0.00085411	428.74107636371724	73.326	0.37433	73.326	73.059	73.433	0					33	11	4	0	0	0	0.83753	1	30517	30517		1.8442	0	1	12573000			32955	1294	16207	16273	38224	38224					0.03666693631862472
SSPRRMNNNLN	11	Unmodified	_SSPRRMNNNLN_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8829223513603	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8317	1	4.5769	4.0769	5.0769	0.74525								0	0	0	0.63775	1	1588	1588		0	0	1		+		32956	10957	16208	16274	38225	38225					-0.012882108562962458
SSPRRMNNNLN	11	Unmodified	_SSPRRMNNNLN_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825866580009	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9284	1	4.6737	4.1737	5.1737	0.74525								0	0	0	0.63775	1	1628	1628		0	0	1		+		32957	10957	16208	16274	38226	38226					-0.012882108562962458
SSPRRMNNNLN	11	Unmodified	_SSPRRMNNNLN_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828918337822	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0644	1	4.8097	4.3097	5.3097	0.74525								0	0	0	0.63775	1	1684	1684		0	0	1		+		32958	10957	16208	16274	38227	38227					-0.012882108562962458
SSPRRMNNNLN	11	Unmodified	_SSPRRMNNNLN_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828307986259	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9132	1	6.6439	6.1439	7.1439	0.73074								0	0	0	0.63775	1	2452	2452		0	0	1		+		32959	10957	16208	16274	38228	38228					-0.012882108562962458
SSPRRMNNNLN	11	Unmodified	_SSPRRMNNNLN_					0	0	0			REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	REV__nc|ENSG00000169604|Q9H6X2-5|ANTXR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8823730349541	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0127	1	6.7434	6.2434	7.2434	0.73074								0	0	0	0.63775	1	2494	2494		0	0	1		+		32960	10957	16208	16274	38229	38229					-0.012882108562962458
SSQLPLGQERQ	11	Unmodified	_SSQLPLGQERQ_					0	0	0		ENSG00000106246|ENST00000292478|PTCD1	ENSG00000106246|ENST00000292478|PTCD1	ENSG00000106246|ENST00000292478|PTCD1	MSMS	GG20161007_CRH_Patient100_A02_01	1	621.8275024294853	2	621.825483	1241.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.854	1	45.854	45.354	46.354	0								0	0	0	0.63771	1	19182	19182		11.495	2.7493	1				32961	1560	16209	16275	38230	38230					0.02526095069765688
SSQRNWRYLVK	11	Unmodified	_SSQRNWRYLVK_					0	0	0			REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	718.8887206912041	2	718.891492	1435.76843	1.7073	0.0012273	1.8928	0.0013607	3.6001	0.0025881	719.3959426734701	46.842	0.27379	47.172	47.023	47.297	0.33034					10	8	2	0	0	0	0.97491	1	19650	19650		5.2969	2.3016	1	520690	+		32962	10256	16210	16276	38231	38231					0.06797744877349032
SSQRNWRYLVK	11	Unmodified	_SSQRNWRYLVK_					0	0	0			REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	718.8924438357353	2	718.891492	1435.76843	1.4554	0.0010463	-0.75901	-0.00054565	0.69641	0.00050064	718.8906190060789	45.632	0.28051	47.007	46.897	47.177	1.3751					15	8	2	0	0	0	0.97491	1	19125	19125		5.2969	0	1	739230	+		32963	10256	16210	16276	38232	38232					0.06797744877349032
SSREKLKEI	9	Unmodified	_SSREKLKEI_					0	0	0			REV__TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	REV__TRIP11|p.N1845Tfs*4|1|0.37|ENSG00000100815|chr14:91974669-91974669|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3184081912041	2	545.316763	1088.61897	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.364	1	74.689	74.189	75.189	0.32464								0	0	0	0.42693	1	31104	31104		1.8442	0	1		+		32964	9007	16211	16277	38233	38233					0.07820799534761136
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4107543826103	2	672.408175	1342.8018	2.5354	0.0017048	1.0788	0.00072542	3.6142	0.0024302	672.4088403979092	83.537	2.3909	83.537	82.677	85.068	0					147	76	2	0	0	0	0.89803	1	34732	34732		1.4819	0	1	4004900	+		32965	13235	16212	16278	38234	38234					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4100829958916	2	672.408175	1342.8018	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.096	1	82.096	81.596	82.596	0								0	0	0	0.66227	1	34199	34199		1.4819	0	1		+		32966	13235	16212	16278	38235	38235					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4101440310478	2	672.408175	1342.8018	1.9383	0.0013033	0.99084	0.00066625	2.9292	0.0019696	672.408867948159	81.206	1.355	81.497	80.561	81.916	0.29056					107	43	3	0	0	0	0.89803	1	33893	33893		1.4819	0	1	2380900	+		32967	13235	16212	16278	38236	38236					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4116699099541	2	672.408175	1342.8018	2.1971	0.0014774	1.6636	0.0011186	3.8607	0.002596	672.4089765336895	82.917	0.58102	83.187	82.787	83.368	0.27029					46	18	3	0	0	0	0.89803	2	34583	34583;34635		1.4819	0	1	3900300	+		32968	13235	16212	16278	38237;38238	38237					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4094116091728	2	672.408175	1342.8018	2.3022	0.001548	1.7048	0.0011464	4.0071	0.0026944	672.4092482135173	83.339	1.8454	83.609	83.337	85.183	0.27029					130	58	4	0	0	0	0.89803	3	34764	34764;34920;34971		1.4819	0	1	4562300	+		32969	13235	16212	16278	38239;38240;38241	38239					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4115478396416	2	672.408175	1342.8018	3.2649	0.0021953	1.8082	0.0012158	5.0731	0.0034112	672.4087617945283	82.576	1.3123	83.789	83.006	84.319	1.2125					60	41	3	0	0	0	0.89803	1	34432	34432		1.4819	0	1	3323200	+		32970	13235	16212	16278	38242	38242					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.4112426638603	2	672.408175	1342.8018	2.9493	0.0019831	2.6136	0.0017574	5.5629	0.0037405	672.4098364296807	82.272	1.4675	83.942	83.201	84.668	1.67					72	46	3	0	0	0	0.89803	2	34478	34478;34532		1.4819	0	1	3547500	+		32971	13235	16212	16278	38243;38244	38243					0.14410791439922832
SSRERRRKRL	10	Unmodified	_SSRERRRKRL_					0	0	0			REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	REV__ENST00000466075.1_1_2:239136435-239140270:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.6102783083916	3	448.607875	1342.8018	3.4054	0.0015277	1.1964	0.0005367	4.6017	0.0020644	448.6083573309561	82.46	0.50201	84.13	83.702	84.205	1.67					29	15	2	0	0	0	0.89803	1	34589	34589		0.62683	0.12087	1	1416500	+		32972	13235	16212	16278	38245	38245					0.14410791439922832
SSRGRPHLRR	10	Unmodified	_SSRGRPHLRR_					0	0	0			REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3573486208916	2	611.355411	1220.69627	2.1011	0.0012845	0.99339	0.00060731	3.0945	0.0018918	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	0.89803	2	32808	32808;33013		1.4819	0	1	6519600	+		32973	12271	16213	16279	38246;38247	38246					0.09474875314276687
SSRGRPHLRR	10	Unmodified	_SSRGRPHLRR_					0	0	0			REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3576537966728	2	611.355411	1220.69627	1.6593	0.0010144	1.9791	0.00121	3.6385	0.0022244	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.88314	3	33246	33246;33296;33404		3.2813	1.7994	1	10904000	+		32974	12271	16213	16279	38248;38249;38250	38248					0.09474875314276687
SSRGRPHLRR	10	Unmodified	_SSRGRPHLRR_					0	0	0			REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	REV__ENST00000286371.7_1_3:141595540-141622555:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3575927615166	2	611.355411	1220.69627	2.531	0.0015474	1.9396	0.0011858	4.4707	0.0027332	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.89803	2	33090	33090;33250		1.3295	0.72803	1	7141600	+		32975	12271	16213	16279	38251;38252	38251					0.09474875314276687
SSRHRLCFRE	10	Unmodified	_SSRHRLCFRE_					0	0	0			REV__ENST00000483911.1_1_2:219748908-219754805:+|nuORF	REV__ENST00000483911.1_1_2:219748908-219754805:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8900024294853	3	430.88765	1289.64112	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.879	1	91.284	90.784	91.784	1.4045								0	0	0	0.66254	1	37863	37863		0.15932	0	1		+		32976	13382	16214	16280	38253	38253					0.007887007315275696
SSRILRELHK	10	Unmodified	_SSRILRELHK_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8696777224541	2	619.870028	1237.7255	2.2512	0.0013954	-0.84956	-0.00052662	1.4016	0.00086883	619.8691419303617	80.651	1.1962	80.651	80.447	81.643	0					58	38	2	0	0	0	0.89803	1	33627	33627		1.4819	0	1	2186700	+		32977	10597	16215	16281	38254	38254					0.11614974819917734
SSRILRELHK	10	Unmodified	_SSRILRELHK_					0	0	0			REV__ENSG00000160294|ENST00000291688|MCM3AP	REV__ENSG00000160294|ENST00000291688|MCM3AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8710815310478	2	619.870028	1237.7255	1.6732	0.0010372	-0.23431	-0.00014524	1.4389	0.00089193	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	0.89803	4	32846	32846;33052;33201;33280		1.4819	0	1	8897800	+		32978	10597	16215	16281	38255;38256;38257;38258	38255					0.11614974819917734
SSRIRKLE	8	Unmodified	_SSRIRKLE_					0	0	0		ENST00000541903.6_1_17:422370-426182:-|nuORF;ENSG00000141252|ENST00000437048|VPS53	ENST00000541903.6_1_17:422370-426182:-|nuORF	ENST00000541903.6_1_17:422370-426182:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.8016845583916	2	494.79854	987.582528	5.8965	0.0029176	-0.84719	-0.00041919	5.0493	0.0024984	494.7982234952372	88.601	0.45219	89.657	89.466	89.918	1.0562					31	13	3	0	0	0	0.89051	1	37424	37424		2.3027	0	1	2036600			32979	2950	16216	16282	38259	38259					0.08823967428702417
SSRIRKLE	8	Unmodified	_SSRIRKLE_					0	0	0		ENST00000541903.6_1_17:422370-426182:-|nuORF;ENSG00000141252|ENST00000437048|VPS53	ENST00000541903.6_1_17:422370-426182:-|nuORF	ENST00000541903.6_1_17:422370-426182:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.8003723025322	2	494.79854	987.582528	4.7029	0.002327	-0.62026	-0.0003069	4.0826	0.0020201	494.7983795631601	88.259	0.41308	89.706	89.54	89.953	1.4467					29	12	3	0	0	0	0.89051	1	37236	37236		2.3027	0	1	2154900			32980	2950	16216	16282	38260	38260					0.08823967428702417
SSRKNAFVKKT	11	Unmodified	_SSRKNAFVKKT_					0	0	0		ENST00000560118.1_1_15:59732271-59738696:+|nuORF	ENST00000560118.1_1_15:59732271-59738696:+|nuORF	ENST00000560118.1_1_15:59732271-59738696:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3701660037041	2	633.369861	1264.72517	1.9685	0.0012468	-1.3782	-0.00087293	0.59024	0.00037384	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	1.0214	1	34113	34113		2.4985	1.0166	1	7751600			32981	7326	16217	16283	38261	38261					0.10339555100040343
SSRKPISALS	10	Unmodified	_SSRKPISALS_					0	0	0		ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	ENSG00000165105|ENST00000376447|RASEF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3044921755791	2	523.303655	1044.59276	1.7919	0.00093771	-0.9425	-0.00049321	0.8494	0.0004445	523.3033827690094	70.122	2.1807	70.122	69.202	71.383	0					180	69	4	0	0	0	0.88579	1	29052	29052		2.9952	0	1	4159100			32982	3815	16218	16284	38262	38262					0.07224530363282611
SSRKSKKRAF	10	Unmodified	_SSRKSKKRAF_					0	0	0		ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8566161990166	2	597.856921	1193.69929	2.1578	0.00129	-0.9659	-0.00057747	1.1919	0.00071257	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.88579	4	32339	31935;31978;32248;32339		2.9952	1.5133	1	9732000			32983	4624	16219	16285	38263;38264;38265;38266	38266					0.11018705648439209
SSRKSKKRAF	10	Unmodified	_SSRKSKKRAF_					0	0	0		ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8580200076103	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	0.89803	1	31217	31217		1.4819	0	1	3279500			32984	4624	16219	16285	38267	38267					0.11018705648439209
SSRKSKKRAF	10	Unmodified	_SSRKSKKRAF_					0	0	0		ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8576537966728	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.88579	6	32173	32058;32173;32212;32292;32477;32675		2.9952	1.5133	1	11246000			32985	4624	16219	16285	38268;38269;38270;38271;38272;38273	38269					0.11018705648439209
SSRKSKKRAF	10	Unmodified	_SSRKSKKRAF_					0	0	0		ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8572265505791	2	597.856921	1193.69929	2.5642	0.001533	-0.41766	-0.0002497	2.1465	0.0012833	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.89803	1	31970	31970		1.4819	0	1	10594000			32986	4624	16219	16285	38274	38274					0.11018705648439209
SSRKSKKRAF	10	Unmodified	_SSRKSKKRAF_					0	0	0		ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	ENSG00000182752|ENST00000328252|PAPPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8572875857353	2	597.856921	1193.69929	2.7426	0.0016397	-1.2371	-0.00073962	1.5055	0.00090004	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.88579	1	31986	31986		2.9952	0.93549	1	9838100			32987	4624	16219	16285	38275	38275					0.11018705648439209
SSRLRLDPV	9	Unmodified	_SSRLRLDPV_					0	0	0		ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2059509158134	3	348.204974	1041.59309	-0.46992	-0.00016363	4.149	0.0014447	3.6791	0.0012811	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.79386	1	12706	12706		3.5871	1.0886	1	6459500			32988	3487	16220	16286	38276	38276					0.073959500831279
SSRLRLDPV	9	Unmodified	_SSRLRLDPV_					0	0	0		ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	ENSG00000158008|ENST00000374280|EXTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2058593630791	3	348.204974	1041.59309	0.35939	0.00012514	2.8561	0.00099452	3.2155	0.0011197	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.77876	2	12501	12501;12553		4.1895	0	1	7605500			32989	3487	16220	16286	38277;38278	38277					0.073959500831279
SSRLVIIMKM	10	Unmodified	_SSRLVIIMKM_					0	0	0			REV__ENST00000438193.1_2_19:54872771-54881940:-|nuORF	REV__ENST00000438193.1_2_19:54872771-54881940:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3445312380791	2	589.343412	1176.67227	1.9837	0.0011691	-0.36347	-0.00021421	1.6202	0.00095485	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.89803	2	32103	32103;32180		1.4819	0	1	9065200	+		32990	13065	16221	16287	38279;38280	38279					0.09100137721407009
SSRLVIIMKM	10	Unmodified	_SSRLVIIMKM_					0	0	0			REV__ENST00000438193.1_2_19:54872771-54881940:-|nuORF	REV__ENST00000438193.1_2_19:54872771-54881940:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3448364138603	2	589.343412	1176.67227	1.9498	0.0011491	-0.26124	-0.00015396	1.6886	0.00099515	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	0.89803	3	32045	32045;32190;32505		1.4819	0	1	8239500	+		32991	13065	16221	16287	38281;38282;38283	38281					0.09100137721407009
SSRNVKVRYL	10	Unmodified	_SSRNVKVRYL_					0	0	0		ENST00000487196.1_1_10:5800911-5803598:+|nuORF	ENST00000487196.1_1_10:5800911-5803598:+|nuORF	ENST00000487196.1_1_10:5800911-5803598:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3569824099541	2	611.356754	1220.69895	2.1011	0.0012845	-1.2028	-0.00073536	0.89824	0.00054914	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	0.88579	1	33162	33162		2.9952	1.5133	1	6519600			32992	6875	16222	16288	38284	38284					0.09743285928607293
SSRPARFLR	9	Unmodified	_SSRPARFLR_					0	0	0		ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3178588747978	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.63129	1	30272	30272		10.074	3.8681	1	5427600			32993	1156	16223	16289	38285	38285					0.07954478414171717
SSRPLRLNRL	10	Unmodified	_SSRPLRLNRL_					0	0	0			REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3704711794853	2	606.370195	1210.72584	2.2971	0.0013929	-1.2342	-0.0007484	1.0629	0.00064452	606.3688892844051	75.627	0.6862	75.949	75.678	76.364	0.32163					36	21	2	0	0	0	0.89803	1	31664	31664		1.3295	0.25807	1	1122300	+		32994	12968	16224	16290	38286	38286					0.12890394539795125
SSRPLRLNRL	10	Unmodified	_SSRPLRLNRL_					0	0	0			REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	606.370195	1210.72584	3.1069	0.0018839	0.073794	4.4746E-05	3.1807	0.0019287	606.3702086241935	74.716	0.67854	76.022	75.786	76.464	1.3063	-0.048382	0.00055926	NaN	1.3295	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	754140	+		32995	12968	16224	16290							0.12890394539795125
SSRPLRLNRL	10	Unmodified	_SSRPLRLNRL_					0	0	0			REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	REV__ENST00000419785.1_1_1:2303243-2316539:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	606.370195	1210.72584	2.9056	0.0017619	0.45246	0.00027436	3.3581	0.0020362	606.3707604273358	74.444	0.66187	76.241	76.021	76.683	1.7962	0.17014	0.0010185	NaN	1.3295	29	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	639790	+		32996	12968	16224	16290							0.12890394539795125
SSRRFLPAR	9	Unmodified	_SSRRFLPAR_					0	0	0		ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	ENSG00000177409|ENST00000318238|SAMD9L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3177368044853	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.83753	1	30193	30193		1.8442	0	1	5427600			32997	4444	16225	16291	38287	38287					0.07954478414171717
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3707153201103	2	606.370195	1210.72584	2.1574	0.0013082	-0.97056	-0.00058852	1.1869	0.00071968	606.369549653458	77.018	0.66023	77.018	76.403	77.063	0					52	20	3	0	0	0	0.89803	1	32054	32054		1.4819	0	1	5160500	+		32998	14402	16226	16292	38288	38288					0.12890394539772387
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3707763552666	2	606.370195	1210.72584	2.1371	0.0012959	-1.3018	-0.00078939	0.83528	0.00050649	606.369326866515	77.237	1.3452	77.237	77.063	78.409	0					115	42	3	0	0	0	0.89803	5	32130	32130;32168;32250;32301;32485		1.4819	0	1	8472300	+		32999	14402	16226	16292	38289;38290;38291;38292;38293	38289					0.12890394539772387
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3709594607353	2	606.370195	1210.72584	1.9807	0.0012011	-0.84354	-0.0005115	1.1372	0.00068956	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	0.89803	4	32061	32061;32162;32293;32343		1.4819	0	1	10235000	+		33000	14402	16226	16292	38294;38295;38296;38297	38294					0.12890394539772387
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3709594607353	2	606.370195	1210.72584	1.7725	0.0010748	-0.12374	-7.5033E-05	1.6488	0.00099978	606.3700463354238	77.81	0.60337	78.126	77.919	78.522	0.31564					47	18	3	0	0	0	0.89803	1	32554	32554		1.4819	0	1	2709800	+		33001	14402	16226	16292	38298	38298					0.12890394539772387
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3719360232353	2	606.370195	1210.72584	2.4698	0.0014976	-0.25012	-0.00015167	2.2197	0.001346	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	0.89803	3	31743	31743;31841;32100		1.4819	0	1	6795700	+		33002	14402	16226	16292	38299;38300;38301	38299					0.12890394539772387
SSRRINPLRL	10	Unmodified	_SSRRINPLRL_					0	0	0			REV__nc|ENSG00000099204|O14639-5|ABLIM1	REV__nc|ENSG00000099204|O14639-5|ABLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3702270388603	2	606.370195	1210.72584	2.6989	0.0016366	-0.80005	-0.00048513	1.8989	0.0011514	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	0.89803	2	31736	31736;31804		1.4819	0	1	6855700	+		33003	14402	16226	16292	38302;38303	38302					0.12890394539772387
SSRRKVLE	8	Unmodified	_SSRRKVLE_					0	0	0			REV__tr|A0A553SJ51|A0A553SJ51_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16130PE=4SV=1	REV__tr|A0A553SJ51|A0A553SJ51_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16130PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7917663455009	2	487.790715	973.566878	1.8361	0.00089565	-0.028455	-1.388E-05	1.8077	0.00088177	487.7906861622021	64.493	2.2195	64.493	63.773	65.992	0					95	69	2	0	0	0	0.8873	1	26824	26824		4.3292	0	1	1453800	+		33004	14882	16227	16293	38304	38304					0.07903680911658739
SSRRKVLE	8	Unmodified	_SSRRKVLE_					0	0	0			REV__tr|A0A553SJ51|A0A553SJ51_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16130PE=4SV=1	REV__tr|A0A553SJ51|A0A553SJ51_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_16130PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7928344607353	2	487.790715	973.566878	2.644	0.0012897	-0.21506	-0.00010491	2.4289	0.0011848	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.89124	1	27289	27289		1.8442	0	1	1452800	+		33005	14882	16227	16293	38305	38305					0.07903680911658739
SSRRPPRRAR	10	Unmodified	_SSRRPPRRAR_					0	0	0			REV__ENST00000525036.1_1_13:48877982-48934322:+|nuORF	REV__ENST00000525036.1_1_13:48877982-48934322:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8705932497978	2	619.868686	1237.72282	2.1605	0.0013392	0.76827	0.00047623	2.9288	0.0018155	619.8688226108452	75.929	0.74268	75.929	75.723	76.466	0					48	23	3	0	0	0	0.89803	1	31580	31580		1.1933	0.88631	1	1040800	+		33006	13655	16228	16294	38306	38306					0.11346564205632603
SSRRRRPA	8	Unmodified	_SSRRRRPA_					0	0	0		ENST00000370339.7_1_20:61847321-61847444:-|nuORF	ENST00000370339.7_1_20:61847321-61847444:-|nuORF	ENST00000370339.7_1_20:61847321-61847444:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	329.1968566775322	3	329.196924	984.568943	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.61	1	101.68	101.18	102.18	0.067009								0	0	0	1.0178	1	42545	42545		0.40072	0	1				33007	6112	16229	16295	38307	38307					0.07604154440116417
SSRRRRPRAP	10	Unmodified	_SSRRRRPRAP_					0	0	0			REV__ENST00000402690.6_3_18:45423134-45457349:-|nuORF	REV__ENST00000402690.6_3_18:45423134-45457349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8698608279228	2	619.868686	1237.72282	1.988	0.0012323	1.5209	0.00094276	3.5089	0.0021751	619.8693389903442	77.066	1.4438	77.383	76.506	77.95	0.31653					106	45	3	0	0	0	0.8974	1	32415	32415		1.4819	0.15237	1	3462500	+		33008	12890	16230	16296	38308	38308					0.11346564205632603
SSRRVLPVE	9	Unmodified	_SSRRVLPVE_					0	0	0			REV__chr19:48384482-48391268|182|18.11|0.4|5.49|-|1|KDELR1,KDELR1|1	REV__chr19:48384482-48391268|182|18.11|0.4|5.49|-|1|KDELR1,KDELR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.2066528201103	3	348.204974	1041.59309	-0.46992	-0.00016363	4.149	0.0014447	3.6791	0.0012811	348.20560853729677	30.46	2.2176	31.743	30.222	32.439	1.2825					142	71	4	0	0	0	0.77876	1	12757	12757		4.1895	0	1	6459500	+		33009	8290	16231	16297	38309	38309					0.073959500831279
SSRRVLPVE	9	Unmodified	_SSRRVLPVE_					0	0	0			REV__chr19:48384482-48391268|182|18.11|0.4|5.49|-|1|KDELR1,KDELR1|1	REV__chr19:48384482-48391268|182|18.11|0.4|5.49|-|1|KDELR1,KDELR1|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2062255740166	3	348.204974	1041.59309	0.35939	0.00012514	2.8561	0.00099452	3.2155	0.0011197	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.77876	1	12605	12605		4.1895	0	1	7605500	+		33010	8290	16231	16297	38310	38310					0.073959500831279
SSRSRVHY	8	Unmodified	_SSRSRVHY_					0	0	0			REV__nc|ENSG00000176444|P49760-2|CLK2	REV__nc|ENSG00000176444|P49760-2|CLK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	331.1733581423759	3	331.173785	990.499526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.686	1	79.953	79.453	80.453	1.2668								0	0	0	1.0178	1	33031	33031		1.4819	0	1		+		33011	11181	16232	16298	38311	38311					0.0038965070070844376
SSRSRVHY	8	Unmodified	_SSRSRVHY_					0	0	0			REV__nc|ENSG00000176444|P49760-2|CLK2	REV__nc|ENSG00000176444|P49760-2|CLK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	331.1735412478447	3	331.173785	990.499526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.846	1	80.112	79.612	80.612	1.2668								0	0	0	1.0178	1	33096	33096		1.4819	0	1		+		33012	11181	16232	16298	38312	38312					0.0038965070070844376
SSRSRVHY	8	Unmodified	_SSRSRVHY_					0	0	0			REV__nc|ENSG00000176444|P49760-2|CLK2	REV__nc|ENSG00000176444|P49760-2|CLK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	331.1734191775322	3	331.173785	990.499526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.124	1	80.391	79.891	80.891	1.2668								0	0	0	1.0178	1	33213	33213		1.4819	0	1		+		33013	11181	16232	16298	38313	38313					0.0038965070070844376
SSRSRVHY	8	Unmodified	_SSRSRVHY_					0	0	0			REV__nc|ENSG00000176444|P49760-2|CLK2	REV__nc|ENSG00000176444|P49760-2|CLK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	331.1734802126884	3	331.173785	990.499526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.809	1	81.06	80.56	81.56	1.2512								0	0	0	1.0178	1	33499	33499		1.4819	0	1		+		33014	11181	16232	16298	38314	38314					0.0038965070070844376
SSSCLLPC	8	Unmodified	_SSSCLLPC_					0	0	0			REV__ENST00000534842.1_1_12:53647415-53647604:+|nuORF	REV__ENST00000534842.1_1_12:53647415-53647604:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1797057986259	2	405.180232	808.345911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.03	1	60.358	59.858	60.858	0.32809								0	0	0	1.0178	1	25158	25158		0.79363	0	1		+		33015	13735	16233	16299	38315	38315					-0.06592843451494446
SSSFQEEVLK	10	Unmodified	_SSSFQEEVLK_					0	0	0			REV__nc|ENSG00000170448|Q6ZNB6-2|NFXL1	REV__nc|ENSG00000170448|Q6ZNB6-2|NFXL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.2874633669853	2	577.290411	1152.56627	1.1082	0.00063975	-2.7527	-0.0015891	-1.6445	-0.00094935	577.2882974457069	28.321	0.37259	28.321	28.194	28.566	0					20	11	2	0	0	0	0.47063	1	11891	11891		29.082	5.061	1	925140	+		33016	10987	16234	16300	38316	38316					-0.0039120331871345115
SSSGDGGD	8	Unmodified	_SSSGDGGD_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6;REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2325317263603	1	681.232204	680.224927	1.1034	0.00075167	-4.356	-0.0029674	-3.2526	-0.0022158	681.2297919470005	30.939	0.52869	31.23	30.857	31.386	0.29086					26	17	2	0	0	0	0.89198	2	12921	12921;13002		0	0	1	330700	+		33017	9893;10256	16235	16301	38317;38318	38317					-0.127976315689466
SSSGDGGD	8	Unmodified	_SSSGDGGD_					0	0	0			REV__ENSG00000134115|ENST00000446702|CNTN6;REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	REV__nc|ENSG00000144619|Q8IWV2-2|CNTN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	681.2314941287041	1	681.232204	680.224927	1.6018	0.0010912	-4.3909	-0.0029912	-2.7891	-0.0019	681.2299383075582	40.059	0.34344	40.372	40.227	40.57	0.31263					15	10	2	0	0	0	0.89198	1	16837	16837		0	0	1	329770	+		33018	9893;10256	16235	16301	38319	38319					-0.127976315689466
SSSLIPGV	8	Unmodified	_SSSLIPGV_					0	0	0			REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2163574099541	2	380.215986	758.417419	0.42024	0.00015978	3.6216	0.001377	4.0419	0.0015368	380.21728529081764	26.691	0.85982	28.438	28.129	28.988	1.747					70	28	3	0	0	0	0.88504	1	11085	11085		5.7604	0	1	15550000	+		33019	8931	16236	16302	38320	38320					0.02854735569053446
SSSLIPGV	8	Unmodified	_SSSLIPGV_					0	0	0			REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	380.215986	758.417419	-0.89898	-0.00034181	4.3498	0.0016539	3.4509	0.0013121	380.217541221771	28.284	0.43476	28.284	28.038	28.473	0	-0.16939	0.00047398	NaN	5.7604	36	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7192700	+		33020	8931	16236	16302							0.02854735569053446
SSSLIPGV	8	Unmodified	_SSSLIPGV_					0	0	0			REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	380.215986	758.417419	0.94442	0.00035908	3.5311	0.0013426	4.4756	0.0017017	380.21733500151504	28.317	1.4497	28.588	27.771	29.221	0.27119	0.13477	-0.00014859	NaN	5.7604	102	47	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11253000	+		33021	8931	16236	16302							0.02854735569053446
SSSLIPGV	8	Unmodified	_SSSLIPGV_					0	0	0			REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	REV__nc|ENSG00000095713|Q9NQ79-3|CRTAC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	380.215986	758.417419	0.33468	0.00012725	3.6797	0.0013991	4.0144	0.0015263	380.21734760406787	27.232	1.2422	28.504	27.716	28.959	1.2715	0.050206	-3.5595E-05	NaN	5.7604	85	40	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15695000	+		33022	8931	16236	16302							0.02854735569053446
SSSSKRKK	8	Unmodified	_SSSSKRKK_					0	0	0			REV__ENST00000508662.5_1_5:149618053-149669203:-|nuORF	REV__ENST00000508662.5_1_5:149618053-149669203:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1816284060478	3	303.182169	906.524678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.11	1	101.11	100.61	101.61	0								0	0	0	1.0178	1	42330	42330		0	0	1		+		33023	8720	16237	16303	38321	38321					0.0676770550328456
SSSSSGMNFDE	11	Unmodified	_SSSSSGMNFDE_					0	0	0			REV__nc|ENSG00000260916|Q9ULG6-3|CCPG1	REV__nc|ENSG00000260916|Q9ULG6-3|CCPG1	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.1465026736259	3	383.145121	1146.41353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.25	1	104.41	103.91	104.91	0.16055								0	0	0	0.63775	1	44117	44117		0.45452	0.053801	1		+		33024	11985	16238	16304	38322	38322					-0.15381766777636585
SSSWTYDSPK	10	Unmodified	_SSSWTYDSPK_					0	0	0			REV__ENST00000459912.5_1_10:5682668-5684508:-|nuORF	REV__ENST00000459912.5_1_10:5682668-5684508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	387.1510497927666	3	386.508499	1156.50367	0.30316	0.00011717	1.0747	0.00041539	1.3779	0.00053256	386.84240250786445	15.069	1.1858	15.182	14.915	16.1	0.11295					54	37	2	0	0	0	0.12551	1	6284	6284		0.56317	0	1	566820	+		33025	11630	16239	16305	38323	38323					-0.06832349386922942
SSSYIYYAD	9	Unmodified	_SSSYIYYAD_					0	0	0		nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21	nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21	nc|ENSG00000211947|A0A0B4J1V1|IGHV3-21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	356.8238403201103	3	356.822195	1067.44476	0.80486	0.00028719	-0.57589	-0.00020549	0.22896	8.1699E-05	356.82300385145646	67.236	0.64828	69.125	68.797	69.446	1.8889					63	20	4	0	0	0	0.52273	1	28177	28177		14.405	6.2499	1	13403000			33026	7994	16240	16306	38324	38324					-0.08626825681221817
SSTMCQILRI	10	Unmodified	_SSTMCQILRI_					0	0	0		ENST00000593729.5_1_19:8373659-8373752:-|nuORF	ENST00000593729.5_1_19:8373659-8373752:-|nuORF	ENST00000593729.5_1_19:8373659-8373752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.2982665896416	2	576.299201	1150.58385	0.19124	0.00011021	-1.7818	-0.0010268	-1.5905	-0.00091661	576.2981388184201	14.827	0.15559	14.94	14.852	15.008	0.11295					8	4	2	0	0	0	0.70618	1	6155	6155		18.146	1.0335	1	1279400			33027	7505	16241	16307	38325	38325					0.014580974109321687
SSTMCQILRI	10	Unmodified	_SSTMCQILRI_					0	0	0		ENST00000593729.5_1_19:8373659-8373752:-|nuORF	ENST00000593729.5_1_19:8373659-8373752:-|nuORF	ENST00000593729.5_1_19:8373659-8373752:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	576.299201	1150.58385	0.48181	0.00027766	-0.1786	-0.00010293	0.30321	0.00017474	576.2990166521639	14.858	0.18625	14.858	14.781	14.967	0	-0.040889	0.001334	NaN	18.146	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	816610			33028	7505	16241	16307							0.014580974109321687
SSTSEYED	8	Unmodified	_SSTSEYED_					0	0	0		OR10Q1|p.D274Y|1|0.16|ENSG00000180475|chr11:58228056-58228056|C/A|missense_variant	OR10Q1|p.D274Y|1|0.16|ENSG00000180475|chr11:58228056-58228056|C/A|missense_variant	OR10Q1|p.D274Y|1|0.16|ENSG00000180475|chr11:58228056-58228056|C/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1718627810478	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.665	1	33.49	32.99	33.99	1.8246								0	0	0	1.0178	1	13276	13276		0.79363	0	1				33029	8044	16242	16308	38326	38326					-0.13172554883033172
SSVPGVRLL	9	Unmodified	_SSVPGVRLL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.2858154177666	2	464.284734	926.554916	2.0481	0.00095089	0.32597	0.00015134	2.374	0.0011022	464.28498895840653	42.408	0.5092	43.748	43.382	43.891	1.3399					32	15	3	0	0	0	0.10993	1	17762	17762		46.021	6.0636	1	3304900			33030	626	16243	16309	38327	38327					0.0887006416847953
SSVPGVRLL	9	Unmodified	_SSVPGVRLL_					0	0	0		ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF	ENSG00000026025|ENST00000544301|VIM	ENSG00000026025|ENST00000544301|VIM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2858764529228	2	464.284734	926.554916	2.0562	0.00095468	0.44663	0.00020736	2.5029	0.001162	464.28499359755534	41.839	0.44562	43.732	43.413	43.859	1.8927					27	13	3	0	0	0	0.20671	1	17533	17533		32.305	3.8186	1	3036200			33031	626	16243	16309	38328	38328					0.0887006416847953
SSVRVIVYV	9	Unmodified	_SSVRVIVYV_					0	0	0		CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3068115115166	2	511.305667	1020.59678	2.9056	0.0014857	3.7266	0.0019054	6.6323	0.0033911	511.30751929514923	102.73	0.42151	102.79	102.48	102.91	0.062813					53	27	3	0	0	0	0.83213	2	42981	42981;43028		2.0598	0.21551	1	24685000			33032	139	16244	16310	38329;38330	38329					0.08730619856987687
SSVRVIVYV	9	Unmodified	_SSVRVIVYV_					0	0	0		CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	511.305667	1020.59678	3.47	0.0017742	3.976	0.0020329	7.446	0.0038072	511.30802962258656	102.61	0.31451	102.77	102.53	102.85	0.16445	0.047398	-0.00031733	NaN	2.0598	23	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11115000			33033	139	16244	16310							0.08730619856987687
SSVRVIVYV	9	Unmodified	_SSVRVIVYV_					0	0	0		CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	511.305667	1020.59678	3.6024	0.0018419	4.4113	0.0022555	8.0137	0.0040974	511.3082930263328	102.43	0.23353	102.61	102.44	102.68	0.18066	-0.11246	0.00012782	NaN	2.0598	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11139000			33034	139	16244	16310							0.08730619856987687
SSYFTIGIF	9	Unmodified	_SSYFTIGIF_					0	0	0		tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	tr|A0A553SS87|A0A553SS87_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02630PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7633544802666	2	517.7633	1033.51205	1.3534	0.00070073	-3.1871	-0.0016502	-1.8338	-0.00094945	517.7617585200549	67.236	0.58339	69.125	68.797	69.381	1.8889					47	18	3	0	0	0	0.19075	1	28132	28132		34.102	0	1	22139000			33035	16596	16245	16311	38331	38331					-0.0033675067961667082
STCARLYFKYK	11	Unmodified	_STCARLYFKYK_					0	0	0			REV__nc|ENSG00000134121|O00533|CHL1	REV__nc|ENSG00000134121|O00533|CHL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	690.3625976443291	2	690.360647	1378.70674	0.23947	0.00016532	1.8757	0.0012949	2.1151	0.0014602	690.3615151509302	31.603	0.16867	33.427	33.302	33.47	1.8246					8	5	2	0	0	0	0.91768	1	13238	13238		8.7454	0	1	1546800	+		33036	9894	16246	16312	38332	38332					0.032536771338527615
STELVALLG	9	Unmodified	_STELVALLG_					0	0	0			REV__nc|ENSG00000146955|A4D1S5-2|RAB19	REV__nc|ENSG00000146955|A4D1S5-2|RAB19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7645751833916	2	451.7633	901.512048	3.1359	0.0014167	0.010052	4.5413E-06	3.146	0.0014212	451.76330686009385	62.826	0.56913	64.24	63.807	64.376	1.4134					34	18	2	0	0	0	0.34572	1	26359	26359		23.148	3.7094	1	2454300	+		33037	14456	16247	16313	38333	38333					0.05735249320389357
STFDHPELVKL	11	Unmodified	_STFDHPELVKL_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.2320739626884	3	429.231077	1284.6714	2.0679	0.00088759	-0.018747	-8.0469E-06	2.0491	0.00087954	429.231321710024	40.955	0.31886	42.848	42.705	43.024	1.8927					26	9	3	0	0	0	0.59725	1	17184	17184		21.241	9.0138	1	2605200			33038	3888	16248	16314	38334	38334					0.04045337877687416
STFDHPELVKL	11	Unmodified	_STFDHPELVKL_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	429.231077	1284.6714	2.3289	0.00099966	-0.97067	-0.00041664	1.3583	0.00058302	429.2314924478389	41.434	0.35136	42.759	42.524	42.875	1.3254	-0.044378	-0.00092525	NaN	21.241	34	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2630200			33039	3888	16248	16314							0.04045337877687416
STFSTNYR	8	Unmodified	_STFSTNYR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2292053103447	2	488.230156	974.445759	0.31463	0.00015361	-1.5506	-0.00075707	-1.236	-0.00060346	488.2291780771242	15.738	0.16978	16.564	16.472	16.642	0.82643					27	13	3	0	0	0	0.058963	1	6533	6533		103.75	18.392	1	8234400			33040	1724	16249	16315	38335	38335					-0.042485665216759116
STFSTNYR	8	Unmodified	_STFSTNYR_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2303954958916	2	488.230156	974.445759	0.2638	0.00012879	-1.4561	-0.00071093	-1.1923	-0.00058214	488.22940363572803	15.664	0.15278	16.703	16.616	16.769	1.0392					25	12	3	0	0	0	0.051422	2	6477	6477;6521		108	15.175	1	9228400			33041	1724	16249	16315	38336;38337	38336					-0.042485665216759116
STGVINMRRG	10	Unmodified	_STGVINMRRG_					0	0	0			REV__nc|ENSG00000158296|Q8WWT9-4|SLC13A3	REV__nc|ENSG00000158296|Q8WWT9-4|SLC13A3	MSMS	GG20161007_CRH_Patient100_A02_01	1	364.1985351443291	3	364.197713	1089.57131	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.901	1	99.901	99.401	100.4	0								0	0	0	0.66176	1	41821	41821		0.62683	0	1		+		33042	14470	16250	16316	38338	38338					0.030108220629017524
STHETVVLP	9	Unmodified	_STHETVVLP_					0	0	0			REV__tr|A0A7D7ABC5|A0A7D7ABC5_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14735PE=4SV=1	REV__tr|A0A7D7ABC5|A0A7D7ABC5_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14735PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1765014529228	3	328.178313	981.513111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.217	1	83.217	82.717	83.717	0								0	0	0	0.42693	1	34674	34674		1.1933	0.735	1		+		33043	15897	16251	16317	38339	38339					0.02161463689287757
STIFGERDYSK	11	Unmodified	_STIFGERDYSK_					0	0	0		ENSG00000147471|ENST00000328195|PLPBP	ENSG00000147471|ENST00000328195|PLPBP	ENSG00000147471|ENST00000328195|PLPBP	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8818542361259	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.952	1	16.992	16.492	17.492	1.0392								0	0	0	0.63775	1	6621	6621		0.45452	0	1				33044	3182	16252	16318	38340	38340					-0.013567270243811436
STILHLVVM	9	Unmodified	_STILHLVVM_					0	0	0		ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7985717654228	2	506.79662	1011.57869	3.187	0.0016151	-0.36694	-0.00018596	2.82	0.0014292	506.79659207773705	62.348	0.43841	63.766	63.524	63.963	1.4177					30	13	4	0	0	0	0.069258	1	26141	26141		60.39	26.287	1	2307200			33045	2408	16253	16319	38341	38341					0.07336161610635372
STILHLVVM	9	Unmodified	_STILHLVVM_					0	0	0		ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	ENSG00000129562|ENST00000250498|DAD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7982665896416	2	506.79662	1011.57869	2.6687	0.0013525	-0.80402	-0.00040747	1.8647	0.000945	506.79646030690606	61.769	0.41068	63.726	63.497	63.908	1.9571					26	12	3	0	0	0	0.19075	1	25891	25891		34.102	10.954	1	1793800			33046	2408	16253	16319	38342	38342					0.07336161610635372
STLFLQQLSL	10	Unmodified	_STLFLQQLSL_					0	0	0			REV__ENST00000578749.5_2_17:27895125-27895269:+|nuORF	REV__ENST00000578749.5_2_17:27895125-27895269:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3309814333916	2	575.329339	1148.64412	2.4201	0.0013924	1.2831	0.00073823	3.7033	0.0021306	575.330292426378	64.34	0.31197	66.268	66.077	66.389	1.928					23	9	3	0	0	0	0.22411	1	26956	26956		46.021	4.1813	1	3042300	+		33047	13992	16254	16320	38343	38343					0.0757485433734928
STLHLVLRL	9	Unmodified	_STLHLVLRL_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;chr19:18571887-18574870|258|100.57|0.48|7.71|+|2|UBA52,UBA52|1;UBC|p.K215_E216dup|1|0.04|ENSG00000150991|chr12:124913123-124913124|-/CTCTTT|inframe_insertion;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENSG00000221983|ENST00000442744|UBA52;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2260314822197	3	351.225598	1050.65496	-0.55464	-0.0001948	1.0904	0.00038297	0.53575	0.00018817	351.2260354977451	51.17	0.60097	52.564	52.316	52.917	1.3938					33	19	2	0	0	0	0.72823	1	21435	21435		6.6304	0	1	1489700			33048	3058	16255	16321	38344	38344					0.13166301502246824
STLHLVLRL	9	Unmodified	_STLHLVLRL_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A;chr19:18571887-18574870|258|100.57|0.48|7.71|+|2|UBA52,UBA52|1;UBC|p.K215_E216dup|1|0.04|ENSG00000150991|chr12:124913123-124913124|-/CTCTTT|inframe_insertion;ENST00000578649.1_1_17:16284470-16285908:+|nuORF;ENST00000584755.1_1_17:21731300-21731612:+|nuORF;ENSG00000221983|ENST00000442744|UBA52;ENST00000584755.1_1_17:21730896-21731370:+|nuORF;ENSG00000170315|ENST00000302182|UBB;ENSG00000150991|ENST00000339647|UBC	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	351.225598	1050.65496	1.3538	0.0004755	-1.7483	-0.00061404	-0.39443	-0.00013853	351.22439813687026	52.434	0.28077	52.759	52.589	52.87	0.32553	0.09772	-0.002299	NaN	6.6304	10	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	265540			33049	3058	16255	16321							0.13166301502246824
STLLKTLLK	9	Unmodified	_STLLKTLLK_					0	0	0		tr|A0A7D6VSM6|A0A7D6VSM6_9CLOTABC-FtyperibosomalprotectionproteinOS=ClostridiumintestinaleOX=36845GN=abc-fPE=4SV=1	tr|A0A7D6VSM6|A0A7D6VSM6_9CLOTABC-FtyperibosomalprotectionproteinOS=ClostridiumintestinaleOX=36845GN=abc-fPE=4SV=1	tr|A0A7D6VSM6|A0A7D6VSM6_9CLOTABC-FtyperibosomalprotectionproteinOS=ClostridiumintestinaleOX=36845GN=abc-fPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.8408080935478	2	508.839342	1015.66413	1.4575	0.00074162	1.6373	0.00083314	3.0948	0.0015748	508.8400362344037	106.14	0.1615	106.14	106.05	106.21	0					21	7	4	0	0	0	0.85019	1	45211	45211		0.52476	0	1	171080000			33050	16875	16256	16322	38345	38345					0.15692650067956038
STLLRPVG	8	Unmodified	_STLLRPVG_					0	0	0			REV__ENST00000358912.4_1_2:64335433-64371452:-|nuORF	REV__ENST00000358912.4_1_2:64335433-64371452:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7597228884697	2	421.758352	841.502152	3.0879	0.0013023	0.21922	9.2458E-05	3.3071	0.0013948	421.7583717990952	104.47	0.11237	104.63	104.56	104.67	0.16055					15	5	4	0	0	0	0.89008	1	44265	44265		2.5775	0	1	68507000	+		33051	12582	16257	16323	38346	38346					0.07506106105665822
STLPTWAWK	9	Unmodified	_STLPTWAWK_					0	0	0		ENST00000321867.5_1_12:132406822-132407029:+|nuORF	ENST00000321867.5_1_12:132406822-132407029:+|nuORF	ENST00000321867.5_1_12:132406822-132407029:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.2933227419853	2	545.290017	1088.56548	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.977	1	39.286	38.786	39.786	0.30857								0	0	0	0.42693	1	16395	16395		4.3292	0.38484	1				33052	5847	16258	16324	38347	38347					0.024740468228856116
STMTSGQARA	10	Unmodified	_STMTSGQARA_					0	0	0		ENSG00000106609|ENST00000341567|TMEM248;chr7:66921461-66922149|420|15.78|0.86|4.19|+|ENST00000607045|TMEM248,TMEM248;nc|ENSG00000106609|Q9NWD8-2|TMEM248	ENSG00000106609|ENST00000341567|TMEM248	ENSG00000106609|ENST00000341567|TMEM248	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2426330447197	2	505.240198	1008.46584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.53	103.03	104.03	0.18066								0	0	0	0.66218	1	43504	43504		0	0	1				33053	1574	16259	16325	38348	38348					-0.038051388533631325
STNEEDEK	8	Unmodified	_STNEEDEK_					0	0	0			REV__nc|ENSG00000071564|P15923-2|TCF3	REV__nc|ENSG00000071564|P15923-2|TCF3	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1990844607353	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.538	1	15.538	15.038	16.038	0								0	0	0	1.0178	1	6450	6450		2.5775	0	1		+		33054	8727	16260	16326	38349	38349					-0.09429177100378183
STNEEDEK	8	Unmodified	_STNEEDEK_					0	0	0			REV__nc|ENSG00000071564|P15923-2|TCF3	REV__nc|ENSG00000071564|P15923-2|TCF3	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1992065310478	2	476.198719	950.382884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.64	1	15.64	15.14	16.14	0								0	0	0	1.0178	1	6494	6494		2.5775	0	1		+		33055	8727	16260	16326	38350	38350					-0.09429177100378183
STNTKGLQDFK	11	Unmodified	_STNTKGLQDFK_					0	0	0			REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8243286013603	2	619.822409	1237.63027	2.2509	0.0013951	2.253	0.0013964	4.5038	0.0027916	619.8235595790702	78.14	0.4182	79.421	79.198	79.616	1.2809					32	13	3	0	0	0	0.46674	1	32794	32794		24.991	6.8446	1	4612400	+		33056	9214	16261	16327	38351	38351					0.020955768382236784
STNTKGLQDFK	11	Unmodified	_STNTKGLQDFK_					0	0	0			REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	619.8707153201103	2	619.822409	1237.63027	2.2509	0.0013951	2.253	0.0013964	4.5038	0.0027916	619.8235595790702	78.14	0.4182	79.421	79.198	79.616	1.2809					32	13	3	0	0	0	0.14112	1	32779	32779		24.991	7.8781	1	4612400	+		33057	9214	16261	16327	38352	38352					0.020955768382236784
STNTKGLQDFK	11	Unmodified	_STNTKGLQDFK_					0	0	0			REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	REV__nc|ENSG00000106701|Q9BXM9-2|FSD1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8228637576103	2	619.822409	1237.63027	0.96945	0.00060088	0.8538	0.00052921	1.8232	0.0011301	619.8232014863154	77.614	0.42232	79.366	79.231	79.654	1.7514					21	13	3	0	0	0	0.46674	1	32557	32557		24.991	4.5764	1	6187000	+		33058	9214	16261	16327	38353	38353					0.020955768382236784
STNTWEPLQNL	11	Unmodified	_STNTWEPLQNL_					0	0	0		SUV39H2|p.I154Yfs*4|1|0.05|ENSG00000152455|chr10:14897127-14897128|-/T|frameshift_variant;nc|ENSG00000152455|Q9H5I1-3|SUV39H2;nc|ENSG00000152455|Q9H5I1-2|SUV39H2;ENSG00000152455|ENST00000354919|SUV39H2	SUV39H2|p.I154Yfs*4|1|0.05|ENSG00000152455|chr10:14897127-14897128|-/T|frameshift_variant	SUV39H2|p.I154Yfs*4|1|0.05|ENSG00000152455|chr10:14897127-14897128|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8819763064384	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.816	1	11.485	10.985	11.985	0.66934								0	0	0	0.63775	1	4497	4497		0.32927	0.060251	1				33059	3327	16262	16328	38354	38354					-0.013567270243584062
STQGNHKK	8	Unmodified	_STQGNHKK_					0	0	0		ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	ENSG00000176771|ENST00000409261|NCKAP5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.2049743533134	3	300.494636	898.462078	-3.3236	-0.00099873	-0.9858	-0.00029623	-4.3094	-0.001295	300.4944814884285	16.922	0.87827	16.922	16.531	17.41	0					80	27	5	0	0	0	2.3239	1	7169	7169		0	0	1	14476000			33060	4418	16263	16329	38355	38355					0.00878559435079751
STQKKCDT	8	Unmodified	_STQKKCDT_					0	0	0			REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	REV__HERC4|p.W548Ifs*7|1|0.13|ENSG00000148634|chr10:67988827-67988828|-/AATATAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	910.4303466677666	1	910.429858	909.422581	1.1236	0.0010229	-1.141	-0.0010388	-0.0174	-1.5841E-05	910.4291739192562	104.87	0.093292	104.87	104.83	104.92	0					15	4	5	0	0	0	0.88587	1	44379	44379		5.2307	0	1	160250000	+		33061	14181	16264	16330	38356	38356					-0.035753286306544396
STRCGWLL	8	Unmodified	_STRCGWLL_					0	0	0		ENST00000299824.5_1_20:37529267-37531364:+|nuORF	ENST00000299824.5_1_20:37529267-37531364:+|nuORF	ENST00000299824.5_1_20:37529267-37531364:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2439147830009	2	468.242012	934.469472	3.6931	0.0017293	0.50087	0.00023453	4.194	0.0019638	468.24225080418336	73.886	0.34346	75.204	75.062	75.405	1.318					33	10	4	0	0	0	0.82039	1	31027	31027		19.439	0	1	2751500			33062	5749	16265	16331	38357	38357					-0.00038424288834448816
STRPPRLSI	9	Unmodified	_STRPPRLSI_					0	0	0		ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8745605349541	3	342.873336	1025.59818	0.94013	0.00032235	3.3577	0.0011513	4.2978	0.0014736	342.87446472036237	35.034	0.35202	35.333	35.097	35.449	0.29942					38	29	2	0	0	0	0.53525	1	14718	14718		9.544	2.4423	1	11243000			33063	6244	16266	16332	38358	38358					0.08640253945759468
STRPPRLSI	9	Unmodified	_STRPPRLSI_					0	0	0		ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	342.873336	1025.59818	-1.6898	-0.0005794	5.3813	0.0018451	3.6915	0.0012657	342.87509574774833	35.074	0.3019	35.074	34.869	35.17	0	0.011735	0.0012528	NaN	9.544	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8011600			33064	6244	16266	16332							0.08640253945759468
STRPPRLSI	9	Unmodified	_STRPPRLSI_					0	0	0		ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	342.873336	1025.59818	-0.77356	-0.00026523	4.3366	0.0014869	3.5631	0.0012217	342.8748353830219	33.619	0.25541	34.893	34.742	34.997	1.2746	-0.16856	0.00017821	NaN	9.544	38	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21438000			33065	6244	16266	16332							0.08640253945759468
STRPPRLSI	9	Unmodified	_STRPPRLSI_					0	0	0		ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	ENST00000389154.7_2_12:111893963-111895049:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	342.873336	1025.59818	0.34253	0.00011744	3.6153	0.0012396	3.9579	0.001357	342.87454024153874	33.123	0.16578	34.948	34.852	35.018	1.8246	-0.11425	-0.00056372	NaN	9.544	28	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15186000			33066	6244	16266	16332							0.08640253945759468
STSNKWCRLW	10	Unmodified	_STSNKWCRLW_					0	0	0		ENST00000376552.6_1_9:82227592-82242331:+|nuORF	ENST00000376552.6_1_9:82227592-82242331:+|nuORF	ENST00000376552.6_1_9:82227592-82242331:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	641.3181640505791	2	640.813864	1279.61318	2.7179	0.0017416	2.3462	0.0015035	5.064	0.0032451	641.3184014496925	113.08	0.16358	113.25	113.16	113.33	0.16914					9	4	3	0	0	0	0.12493	1	49057	49057		10.824	0	1	1169000			33067	6191	16267	16333	38359	38359					-0.01544622248570704
STSQKGSF	8	Unmodified	_STSQKGSF_					0	0	0			REV__nc|ENSG00000106078|O75128-6|COBL	REV__nc|ENSG00000106078|O75128-6|COBL	MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2044555544853	2	421.20615	840.397747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.148	1	38.969	38.469	39.469	1.8202								0	0	0	1.0178	1	15587	15587		2.3027	0.24298	1		+		33068	9201	16268	16334	38360	38360					-0.028836404417006634
STTTGHLIYK	10	Unmodified	_STTTGHLIYK_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8050414919853	2	560.803488	1119.59242	0.073893	4.144E-05	1.5112	0.00084751	1.5851	0.00088895	560.80432873529	14.116	0.1699	14.885	14.762	14.932	0.76937					12	6	2	0	0	0	0.051944	1	5854	5854		78.06	39.885	1	1552300			33069	1331	16269	16335	38361	38361					0.03741110643431966
STTTGHLIYK	10	Unmodified	_STTTGHLIYK_					0	0	0		ENSG00000101210|ENST00000217182|EEF1A2;nc|ENSG00000196205|Q5VTE0|EEF1A1P5;ENSG00000156508|ENST00000309268|EEF1A1	ENSG00000101210|ENST00000217182|EEF1A2	ENSG00000101210|ENST00000217182|EEF1A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8045532107353	2	560.803488	1119.59242	0.1541	8.6419E-05	0.5744	0.00032213	0.7285	0.00040855	560.8039242463011	13.983	0.1794	14.81	14.704	14.884	0.82789					13	5	3	0	0	0	0.051944	1	5792	5792		78.06	46.792	1	1559300			33070	1331	16269	16335	38362	38362					0.03741110643431966
STVEIIYIT	9	Unmodified	_STVEIIYIT_					0	0	0		nc|ENSG00000138161|Q86UP6-3|CUZD1;nc|ENSG00000138161|Q86UP6-2|CUZD1;ENSG00000138161|ENST00000392790|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1038.576586902142	1	1038.57175	1037.56448	1.7114	0.0017774	-3.0811	-0.0031999	-1.3697	-0.0014225	1038.571103026949	67.52	0.2518	67.52	67.349	67.601	0					10	7	2	0	0	0	0.59203	1	28135	28135		11.64	0	1	550910			33071	2819	16270	16336	38363	38363					0.047197876633163105
STVEIIYIT	9	Unmodified	_STVEIIYIT_					0	0	0		nc|ENSG00000138161|Q86UP6-3|CUZD1;nc|ENSG00000138161|Q86UP6-2|CUZD1;ENSG00000138161|ENST00000392790|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1038.57175	1037.56448	1.624	0.0016867	0.24539	0.00025486	1.8694	0.0019415	1038.571044646472	65.916	0.2469	67.315	67.152	67.399	1.3989	-0.10132	0.0010947	NaN	11.64	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1614400			33072	2819	16270	16336							0.047197876633163105
STVEIIYIT	9	Unmodified	_STVEIIYIT_					0	0	0		nc|ENSG00000138161|Q86UP6-3|CUZD1;nc|ENSG00000138161|Q86UP6-2|CUZD1;ENSG00000138161|ENST00000392790|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	nc|ENSG00000138161|Q86UP6-3|CUZD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1038.57175	1037.56448	2.731	0.0028363	-0.99211	-0.0010304	1.7389	0.0018059	1038.570692982847	65.505	0.27796	67.414	67.218	67.496	1.9085	-0.0025025	-0.00019052	NaN	11.64	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1456500			33073	2819	16270	16336							0.047197876633163105
STVFDKLK	8	Unmodified	_STVFDKLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.2722350955009	2	469.271293	936.528032	1.4823	0.00069562	0.4414	0.00020714	1.9237	0.00090275	469.27152513758466	24.923	0.39941	24.923	24.673	25.072	0					28	12	3	0	0	0	0.25552	2	10394	10345;10394		75.761	17.082	1	2464600		+	33074	341	16271	16337	38364;38365	38365					0.05722955557280329
STVFDKLK	8	Unmodified	_STVFDKLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.2727538943291	2	469.271293	936.528032	1.5491	0.00072697	0.81982	0.00038472	2.369	0.0011117	469.27185986476997	24.608	0.33331	24.85	24.685	25.018	0.24251					21	10	3	0	0	0	0.37791	1	10255	10255		58.679	12.658	1	932560		+	33075	341	16271	16337	38366	38366					0.05722955557280329
STVFDKLK	8	Unmodified	_STVFDKLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	469.2723266482353	2	469.271293	936.528032	1.4671	0.00068848	1.0698	0.00050201	2.5369	0.0011905	469.27191982944987	23.496	0.27452	24.711	24.565	24.839	1.2145					15	8	2	0	0	0	0.64178	2	9800	9800;9853		36.127	7.6402	1	390890		+	33076	341	16271	16337	38367;38368	38367					0.05722955557280329
STVFDKLK	8	Unmodified	_STVFDKLK_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2720519900322	2	469.271293	936.528032	0.87839	0.0004122	1.4336	0.00067275	2.312	0.001085	469.2719989856743	23.122	0.24453	24.773	24.624	24.869	1.6511					12	7	2	0	0	0	0.76844	1	9645	9645		24.021	4.7636	1	501790		+	33077	341	16271	16337	38369	38369					0.05722955557280329
STVFMKMLLYF	11	Unmodified	_STVFMKMLLYF_					0	0	0			REV__ENSG00000142207|ENST00000382751|URB1	REV__ENSG00000142207|ENST00000382751|URB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	690.3607055544853	2	690.358727	1378.7029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.157	1	33.437	32.937	33.937	1.2801								0	0	0	0.63772	1	13490	13490		9.3831	0.63772	1		+		33078	10173	16272	16338	38370	38370					0.028698713158064493
STVVTLVSV	9	Unmodified	_STVVTLVSV_					0	0	0			REV__chr7:40793501-40860316|268|75.19|0.3|7.99|+|0|TE_info:L1MEd,L1MEd_dup9382,L1,LINE,donor,-,40793444,40793501|None,SUGCT|2	REV__chr7:40793501-40860316|268|75.19|0.3|7.99|+|0|TE_info:L1MEd,L1MEd_dup9382,L1,LINE,donor,-,40793444,40793501|None,SUGCT|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.7723571658134	2	452.771126	903.527698	2.8074	0.0012711	0.29205	0.00013223	3.0994	0.0014033	452.7711406017234	80.492	0.24289	81.743	81.669	81.912	1.2512					17	7	3	0	0	0	0.09539	1	33782	33782		50.855	0	1	1848400	+		33079	8338	16273	16339	38371	38371					0.07207535837437717
STVVTLVSV	9	Unmodified	_STVVTLVSV_					0	0	0			REV__chr7:40793501-40860316|268|75.19|0.3|7.99|+|0|TE_info:L1MEd,L1MEd_dup9382,L1,LINE,donor,-,40793444,40793501|None,SUGCT|2	REV__chr7:40793501-40860316|268|75.19|0.3|7.99|+|0|TE_info:L1MEd,L1MEd_dup9382,L1,LINE,donor,-,40793444,40793501|None,SUGCT|2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	452.771126	903.527698	1.4111	0.00063891	-0.15065	-6.8211E-05	1.2605	0.0005707	452.77103741137785	80.025	0.24931	81.742	81.568	81.817	1.7167	-0.00063134	-0.00023617	NaN	50.855	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	847510	+		33080	8338	16273	16339							0.07207535837437717
STYYFFSCYK	10	Unmodified	_STYYFFSCYK_					0	0	0		L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|107|1|anti-sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|107|1|anti-sense	L1PB4_dup1466|chr4:19614553-19617282:+|1.566952962030771|0.0066926762288261|7.87|427.0|107|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	654.7870361208916	2	654.783907	1307.55326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.48	1	51.48	50.98	51.98	0								0	0	0	0.65894	1	21471	21471		6.2058	0.9089	1				33081	7777	16274	16340	38372	38372					-0.08821357702458954
SVARPRWQV	9	Unmodified	_SVARPRWQV_					0	0	0			REV__nc|ENSG00000179846|Q17RQ9|NKPD1	REV__nc|ENSG00000179846|Q17RQ9|NKPD1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2208129763603	2	549.811982	1097.60941	2.683	0.0014751	4.0874	0.0022473	6.7704	0.0037224	549.8142546767805	95.694	0.29185	95.817	95.622	95.914	0.12331					19	9	3	0	0	0	0.11812	1	39986	39986		2.0598	0.21551	1	4057800	+		33082	11285	16275	16341	38373	38373					0.06451076039888903
SVCRGKGK	8	Unmodified	_SVCRGKGK_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6;ENST00000490828.5_1_2:55184973-55193987:+|nuORF;nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5	nc|ENSG00000214595|Q6ZMW3-2|EML6;nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	834.4651367068291	1	834.461432	833.454156	2.7752	0.0023158	2.9246	0.0024405	5.6998	0.0047563	834.4632221495751	104.8	0.13101	104.86	104.78	104.91	0.056808					16	6	3	0	0	0	0.89198	1	44274	44274		0	0	1	77780000			33083	3843;5242	16276	16342	38374	38374					0.030767089139771997
SVCRGKGK	8	Unmodified	_SVCRGKGK_					0	0	0		nc|ENSG00000214595|Q6ZMW3-2|EML6;ENSG00000214595|ENST00000356458|EML6;ENST00000490828.5_1_2:55184973-55193987:+|nuORF;nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5	nc|ENSG00000214595|Q6ZMW3-2|EML6;nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	834.4667236208916	1	834.461432	833.454156	3.0145	0.0025155	2.7962	0.0023333	5.8108	0.0048489	834.4633263120172	104.72	0.15162	104.89	104.82	104.98	0.1731					12	7	2	0	0	0	0.89198	1	44385	44385		0	0	1	28311000			33084	3843;5242	16276	16342	38375	38375					0.030767089139771997
SVCTFSVLAL	10	Unmodified	_SVCTFSVLAL_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2812377810478	2	520.27826	1038.54197	1.6604	0.00086385	1.9044	0.00099079	3.5647	0.0018546	520.279429103196	50.058	0.27602	52.035	51.883	52.159	1.9772					16	8	2	0	0	0	0.44465	1	20959	20959		30.637	4.3684	1	1327200	+		33085	11981	16277	16343	38376	38376					0.024238649940571122
SVCTFSVLAL	10	Unmodified	_SVCTFSVLAL_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	520.27826	1038.54197	2.0251	0.0010536	1.3511	0.00070293	3.3761	0.0017565	520.2789781122657	50.629	0.27608	52.023	51.862	52.139	1.3938	-0.0061699	-0.00028464	NaN	30.637	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1493900	+		33086	11981	16277	16343							0.024238649940571122
SVCTFSVLAL	10	Unmodified	_SVCTFSVLAL_					0	0	0			REV__ENSG00000259224|ENST00000412468|SLC35G6	REV__ENSG00000259224|ENST00000412468|SLC35G6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	520.27826	1038.54197	1.6604	0.00086385	1.9044	0.00099079	3.5647	0.0018546	520.279429103196	50.058	0.27602	52.035	51.883	52.159	1.9772	0.0061699	0.00029109	NaN	30.637	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1327200	+		33087	11981	16277	16343							0.024238649940571122
SVDPTRLLL	9	Unmodified	_SVDPTRLLL_					0	0	0		nc|ENSG00000186908|Q8IUH5-2|ZDHHC17;ENST00000546778.5_1_12:77157996-77214864:+|nuORF;ENSG00000186908|ENST00000426126|ZDHHC17	nc|ENSG00000186908|Q8IUH5-2|ZDHHC17	nc|ENSG00000186908|Q8IUH5-2|ZDHHC17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.3023559451103	2	507.303124	1012.5917	0.75159	0.00038129	-3.5741	-0.0018132	-2.8225	-0.0014319	507.30237840820655	57.468	0.16236	58.883	58.767	58.929	1.4145					8	5	2	0	0	0	0.19659	1	24094	24094		33.445	8.0456	1	1035200			33088	4810	16278	16344	38377	38377					0.08590315994376851
SVDPTRLLL	9	Unmodified	_SVDPTRLLL_					0	0	0		nc|ENSG00000186908|Q8IUH5-2|ZDHHC17;ENST00000546778.5_1_12:77157996-77214864:+|nuORF;ENSG00000186908|ENST00000426126|ZDHHC17	nc|ENSG00000186908|Q8IUH5-2|ZDHHC17	nc|ENSG00000186908|Q8IUH5-2|ZDHHC17	MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3019286990166	2	507.303124	1012.5917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.85	1	58.818	58.318	59.318	1.9684								0	0	0	0.32813	1	23847	23847		15.847	1.0089	1				33089	4810	16278	16344	38378	38378					0.08590315994376851
SVDWARWGI	9	Unmodified	_SVDWARWGI_					0	0	0		ENST00000299980.8_2_16:71766447-71766639:-|nuORF	ENST00000299980.8_2_16:71766447-71766639:-|nuORF	ENST00000299980.8_2_16:71766447-71766639:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.3192016482353	2	545.277441	1088.54033	3.3637	0.0018342	-4.1281	-0.0022509	-0.76433	-0.00041677	545.7775916167593	72.992	0.092514	74.321	74.257	74.35	1.3298					4	2	2	0	0	0	0.11812	1	30639	30639		2.0598	1.2661	1	215000			33090	5751	16279	16345	38379	38379					-0.00040007979691836226
SVEVLFGDKVL	11	Unmodified	_SVEVLFGDKVL_					0	0	0			REV__ENST00000576964.5_1_17:953371-986816:-|nuORF	REV__ENST00000576964.5_1_17:953371-986816:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	603.3456298708916	2	603.342446	1204.67034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.17	1	100.17	99.673	100.67	0								0	0	0	0.63775	1	41934	41934		2.7352	0.67545	1		+		33091	8076	16280	16346	38380	38380					0.07619123508834491
SVEVLSVVA	9	Unmodified	_SVEVLSVVA_					0	0	0		nc|ENSG00000007174|Q9NYC9-2|DNAH9;DNAH9|p.H4399Qfs*22|1|0.04|ENSG00000007174|chr17:11962220-11962220|T/-|frameshift_variant;ENSG00000007174|ENST00000262442|DNAH9;ENSG00000105877|ENST00000409508|DNAH11	nc|ENSG00000007174|Q9NYC9-2|DNAH9;ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5220825076103	1	902.519325	901.512048	2.4114	0.0021763	0.17172	0.00015498	2.5831	0.0023313	902.5193812126555	79.689	0.46355	80.94	80.707	81.171	1.2512					41	14	4	0	0	0	0.051699	1	33516	33516		67.344	0	1	18308000			33092	1545;417	16281	16347	38381	38381					0.05735249320389357
SVFAGVVGV	9	Unmodified	_SVFAGVVGV_					0	0	0		nc|ENSG00000164116|Q02108-2|GUCY1A1;ENSG00000164116|ENST00000506455|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	834.4743530154228	1	834.47198	833.464704	2.1982	0.0018343	0.32559	0.00027169	2.5238	0.002106	834.4720524192168	61.525	0.31511	61.525	61.362	61.677	0					15	9	2	0	0	0	0.09539	2	25643	25643;25693		50.855	14.811	1	839160			33093	3752	16282	16348	38382;38383	38382					0.04131014840049829
SVFAGVVGV	9	Unmodified	_SVFAGVVGV_					0	0	0		nc|ENSG00000164116|Q02108-2|GUCY1A1;ENSG00000164116|ENST00000506455|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	nc|ENSG00000164116|Q02108-2|GUCY1A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	834.4742919802666	1	834.47198	833.464704	2.1309	0.0017782	0.30302	0.00025286	2.4339	0.002031	834.4722976135423	60.994	0.31306	61.324	61.203	61.516	0.32974					15	9	2	0	0	0	0.11478	1	25561	25561		44.407	6.2558	1	751950			33094	3752	16282	16348	38384	38384					0.04131014840049829
SVFGGLVNY	9	Unmodified	_SVFGGLVNY_					0	0	0		ENST00000490458.1_1_22:21213398-21224822:+|nuORF;ENSG00000099940|ENST00000215730|SNAP29	ENST00000490458.1_1_22:21213398-21224822:+|nuORF	ENST00000490458.1_1_22:21213398-21224822:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	955.4917480349541	1	955.488359	954.481082	1.5391	0.0014706	2.3096	0.0022068	3.8487	0.0036774	955.489903195272	63.951	0.3223	65.358	65.144	65.466	1.4071					20	9	3	0	0	0	0.12174	1	26803	26803		42.095	17.421	1	1610100			33095	1223	16283	16349	38385	38385					0.0020209600613725343
SVFGGLVNY	9	Unmodified	_SVFGGLVNY_					0	0	0		ENST00000490458.1_1_22:21213398-21224822:+|nuORF;ENSG00000099940|ENST00000215730|SNAP29	ENST00000490458.1_1_22:21213398-21224822:+|nuORF	ENST00000490458.1_1_22:21213398-21224822:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	955.4862548708916	1	955.488359	954.481082	2.7236	0.0026023	-1.2725	-0.0012158	1.4511	0.0013865	955.4865928458755	63.406	0.28967	65.351	65.183	65.473	1.9444					14	8	2	0	0	0	0.27148	1	26590	26590		26.884	2.8631	1	1149300			33096	1223	16283	16349	38386	38386					0.0020209600613725343
SVFPGARLL	9	Unmodified	_SVFPGARLL_					0	0	0		ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;nc|ENSG00000142453|Q86X55-2|CARM1	ENSG00000142453|ENST00000327064|CARM1	ENSG00000142453|ENST00000327064|CARM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2869750857353	2	480.287277	958.560001	0.91764	0.00044073	-0.16195	-7.778E-05	0.7557	0.00036295	480.28713002624966	52.843	0.32154	54.244	54.089	54.41	1.4005					20	9	3	0	0	0	0.20671	1	22111	22111		32.305	3.8186	1	2202700			33097	2994	16284	16350	38387	38387					0.07906368031081001
SVFPGARLL	9	Unmodified	_SVFPGARLL_					0	0	0		ENSG00000142453|ENST00000327064|CARM1;nc|ENSG00000142453|Q86X55-1|CARM1;nc|ENSG00000142453|Q86X55-2|CARM1	ENSG00000142453|ENST00000327064|CARM1	ENSG00000142453|ENST00000327064|CARM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2874938845634	2	480.287277	958.560001	1.2697	0.00060982	-1.155	-0.00055472	0.11471	5.5096E-05	480.28670238264084	52.263	0.36835	54.235	54.016	54.385	1.9722					20	11	2	0	0	0	0.30098	2	21911	21858;21911		25.399	9.1823	1	2469800			33098	2994	16284	16350	38388;38389	38389					0.07906368031081001
SVFPRAVAL	9	Unmodified	_SVFPRAVAL_					0	0	0			REV__ENSG00000213903|ENST00000345363|LTB4R	REV__ENSG00000213903|ENST00000345363|LTB4R	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2876159548759	2	480.287277	958.560001	0.91764	0.00044073	-0.16195	-7.778E-05	0.7557	0.00036295	480.28713002624966	52.843	0.32154	54.244	54.089	54.41	1.4005					20	9	3	0	0	0	0.37357	1	22164	22164		21.747	0	1	2202700	+		33099	11843	16285	16351	38390	38390					0.07906368031081001
SVFYDDNITL	10	Unmodified	_SVFYDDNITL_					0	0	0		KIF18A|p.T342Nfs*18|1|0.18|ENSG00000121621|chr11:28084681-28084681|G/-|frameshift_variant	KIF18A|p.T342Nfs*18|1|0.18|ENSG00000121621|chr11:28084681-28084681|G/-|frameshift_variant	KIF18A|p.T342Nfs*18|1|0.18|ENSG00000121621|chr11:28084681-28084681|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	593.7874023318291	2	593.784961	1185.55537	2.1266	0.0012627	0.85248	0.00050619	2.9791	0.0017689	593.7854608227688	74.954	1.8684	74.954	74.173	76.041	0					128	58	3	0	0	0	0.89803	1	31173	31173		1.6526	0.17072	1	1620400			33100	7666	16286	16352	38391	38391					-0.029986056930056293
SVIAIRLL	8	Unmodified	_SVIAIRLL_					0	0	0		ENST00000298159.10_1_14:35181868-35181994:-|nuORF	ENST00000298159.10_1_14:35181868-35181994:-|nuORF	ENST00000298159.10_1_14:35181868-35181994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.8014099001884	2	442.80002	883.585488	3.3806	0.0014969	-0.61702	-0.00027322	2.7636	0.0012237	442.79974873687365	106.15	0.18124	106.31	106.23	106.41	0.15781					34	9	5	0	0	0	0.88587	1	45374	45374		5.2307	0	1	569140000			33101	5739	16287	16353	38392	38392					0.13903842553509094
SVIAIRLL	8	Unmodified	_SVIAIRLL_					0	0	0		ENST00000298159.10_1_14:35181868-35181994:-|nuORF	ENST00000298159.10_1_14:35181868-35181994:-|nuORF	ENST00000298159.10_1_14:35181868-35181994:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.8007690310478	2	442.80002	883.585488	3.3686	0.0014916	-1.0625	-0.00047046	2.3062	0.0010212	442.7995194043858	106.14	0.21599	106.3	106.2	106.42	0.16174					37	11	5	0	0	0	0.88587	1	45296	45296		5.2307	0	1	605380000			33102	5739	16287	16353	38393	38393					0.13903842553509094
SVIDHIHLI	9	Unmodified	_SVIDHIHLI_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.5384399294853	3	349.537953	1045.59203	0.69876	0.00024424	0.72252	0.00025255	1.4213	0.00049679	349.53820884392366	49.42	0.49257	50.811	50.58	51.072	1.3911					35	15	3	0	0	0	0.20244	2	20707	20658;20707		32.786	12.38	1	3015600			33103	2182	16288	16354	38394;38395	38395					0.07105735714230832
SVIDHIHLI	9	Unmodified	_SVIDHIHLI_					0	0	0		ENSG00000123159|ENST00000393033|GIPC1;nc|ENSG00000123159|O14908-2|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	ENSG00000123159|ENST00000393033|GIPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.5380737185478	3	349.537953	1045.59203	1.4325	0.00050072	-0.1549	-5.4143E-05	1.2776	0.00044657	349.53781264293895	48.768	0.46146	50.746	50.607	51.068	1.9772					32	14	3	0	0	0	0.1109	1	20421	20421		45.7	25.285	1	2948600			33104	2182	16288	16354	38396	38396					0.07105735714230832
SVIEQIVYV	9	Unmodified	_SVIEQIVYV_					0	0	0		nc|ENSG00000077150|Q00653-4|NFKB2;ENSG00000077150|ENST00000661543|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2986328005791	2	525.297507	1048.58046	1.8815	0.00098837	2.2081	0.0011599	4.0896	0.0021482	525.2972435090962	67.235	0.57961	68.624	68.438	69.018	1.3888					33	18	3	0	0	0	0.083604	1	28230	28230		54.774	27.89	1	1835100			33105	955	16289	16355	38397	38397					0.05811493900228015
SVIEQIVYV	9	Unmodified	_SVIEQIVYV_					0	0	0		nc|ENSG00000077150|Q00653-4|NFKB2;ENSG00000077150|ENST00000661543|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2979003787041	2	525.297507	1048.58046	1.436	0.00075433	2.4617	0.0012931	3.8977	0.0020474	525.2990915211774	66.713	0.55018	68.602	68.436	68.986	1.8889					24	17	2	0	0	0	0.083604	1	28034	28034		54.774	27.89	1	1720500			33106	955	16289	16355	38398	38398					0.05811493900228015
SVIEQIVYV	9	Unmodified	_SVIEQIVYV_					0	0	0		nc|ENSG00000077150|Q00653-4|NFKB2;ENSG00000077150|ENST00000661543|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	nc|ENSG00000077150|Q00653-4|NFKB2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	525.297507	1048.58046	1.7288	0.00090815	8.0661	0.0042371	9.7949	0.0051453	525.3020791955066	68.393	0.68636	68.715	68.534	69.22	0.32224	0.067938	0.0043385	NaN	54.774	27	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	690480			33107	955	16289	16355							0.05811493900228015
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3010742068291	2	541.30005	1080.58555	1.4454	0.0007824	-1.2548	-0.00067925	0.19056	0.00010315	541.299162839044	95.905	0.34257	95.905	95.746	96.089	0					30	11	4	0	0	0	0.049839	3	40058	40058;40106;40159		68.081	30.107	1	27519000			33108	4383	16290	16356	38399;38400;38401	38399					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1081.595019519329	1	1081.59282	1080.58555	1.7075	0.0018468	-0.10577	-0.0001144	1.6017	0.0017324	1081.5918729930154	95.935	0.20173	95.935	95.803	96.005	0					11	6	2	0	0	0	0.063746	1	40075	40075		62.573	18.714	1	12173000			33109	4383	16290	16356	38402	38402					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3015014529228	2	541.30005	1080.58555	2.7249	0.001475	1.059	0.00057324	3.7839	0.0020482	541.3004934853475	95.675	0.35385	95.799	95.59	95.944	0.12331					35	11	4	0	0	0	0.033504	3	40035	39987;40035;40093		81.89	31.071	1	14046000			33110	4383	16290	16356	38403;38404;38405	38404					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1081.595629870892	1	1081.59282	1080.58555	3.4759	0.0037596	1.3858	0.0014989	4.8618	0.0052585	1081.592293641931	95.663	0.22971	95.786	95.654	95.883	0.12331					14	7	3	0	0	0	0.031145	2	40019	40019;40062		85.642	31.809	1	7732100			33111	4383	16290	16356	38406;38407	38406					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.3033935427666	2	541.30005	1080.58555	4.1241	0.0022324	-0.25832	-0.00013983	3.8658	0.0020925	541.2999047150664	95.067	0.48639	95.808	95.487	95.973	0.74124					55	17	4	0	0	0	0.049839	3	39929	39929;39974;40023		68.081	30.107	1	43671000			33112	4383	16290	16356	38408;38409;38410	38408					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1081.595874011517	1	1081.59282	1080.58555	4.0591	0.0043903	-0.62943	-0.00068079	3.4297	0.0037095	1081.5907794411119	95.034	0.33934	95.776	95.613	95.952	0.74124					25	12	3	0	0	0	0.026734	3	39975	39932;39975;40026		92.653	30.081	1	10176000			33113	4383	16290	16356	38411;38412;38413	38412					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.3016235232353	2	541.30005	1080.58555	3.3182	0.0017961	-0.22857	-0.00012373	3.0896	0.0016724	541.2999304369205	94.569	0.63595	95.758	95.464	96.1	1.1887					60	20	4	0	0	0	0.049839	4	39774	39726;39774;39814;39853		68.081	28.123	1	38090000			33114	4383	16290	16356	38414;38415;38416;38417	38415					0.04847797762840855
SVIEQLFFV	9	Unmodified	_SVIEQLFFV_					0	0	0		nc|ENSG00000185551|P24468-3|NR2F2;nc|ENSG00000185551|P24468-2|NR2F2;ENSG00000185551|ENST00000394166|NR2F2;ENSG00000175745|ENST00000327111|NR2F1;ENST00000506162.1_1_5:92927828-92929545:+|nuORF	nc|ENSG00000185551|P24468-3|NR2F2	nc|ENSG00000185551|P24468-3|NR2F2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1081.598071277142	1	1081.59282	1080.58555	3.5207	0.003808	0.00057461	6.2149E-07	3.5213	0.0038086	1081.5924706510737	94.599	0.45724	95.787	95.527	95.985	1.1887					24	14	2	0	0	0	0.031145	3	39801	39751;39801;39840		85.642	30.107	1	11778000			33115	4383	16290	16356	38418;38419;38420	38419					0.04847797762840855
SVIGEQRQ	8	Unmodified	_SVIGEQRQ_					0	0	0			REV__nc|ENSG00000073464|P51793-2|CLCN4	REV__nc|ENSG00000073464|P51793-2|CLCN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.4863159060478	1	916.48467	915.477394	1.1076	0.0010151	1.2888	0.0011812	2.3965	0.0021963	916.4861622951053	58.594	0.384	60.012	59.845	60.229	1.4181					35	11	4	0	0	0	0.64261	1	24586	24586		36.044	1.9418	1	6944500	+		33116	8744	16291	16357	38421	38421					0.016274262322781397
SVIMGELLLQI	11	Unmodified	_SVIMGELLLQI_					0	0	0			REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.3549682497978	2	608.354499	1214.69445	2.9201	0.0017765	-4.0199	-0.0024455	-1.0998	-0.00066905	608.3517876967344	80.932	0.3068	82.165	82.041	82.348	1.2332					21	9	3	0	0	0	0.16695	1	33992	33992		43.772	1.4599	1	1233600	+		33117	14942	16292	16358	38422	38422					0.09568640670840978
SVIMGELLLQI	11	Unmodified	_SVIMGELLLQI_					0	0	0			REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.7700683474541	2	608.354499	1214.69445	2.9201	0.0017765	-4.0199	-0.0024455	-1.0998	-0.00066905	608.3517876967344	80.932	0.3068	82.165	82.041	82.348	1.2332					21	9	3	0	0	0	0.14028	1	34042	34042		20.415	7.3721	1	1233600	+		33118	14942	16292	16358	38423	38423					0.09568640670840978
SVIMGELLLQI	11	Unmodified	_SVIMGELLLQI_					0	0	0			REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	REV__tr|A0A553SKB0|A0A553SKB0_NIACIRibosomalprocessingcysteineproteasePrpOS=NialliacirculansOX=1397GN=CEQ21_18450PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	608.354499	1214.69445	1.7019	0.0010353	-0.80768	-0.00049136	0.89417	0.00054398	608.3542384203888	80.51	0.33427	82.227	82.05	82.385	1.7167	0.030785	0.0020444	NaN	43.772	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1385000	+		33119	14942	16292	16358							0.09568640670840978
SVIRVLKLRM	10	Unmodified	_SVIRVLKLRM_					0	0	0			REV__ENST00000534843.1_1_12:12982539-12982698:+|nuORF	REV__ENST00000534843.1_1_12:12982539-12982698:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5987121462822	3	405.597037	1213.76928	0.87774	0.00035601	2.8428	0.001153	3.7205	0.001509	405.59817874366803	90.418	0.4577	90.418	90.225	90.682	0					44	14	4	0	0	0	0.89803	1	37860	37860		1.5923	0.96546	1	6226700	+		33120	13736	16293	16359	38424	38424					0.1709486799268234
SVITQVFHV	9	Unmodified	_SVITQVFHV_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.2911254763603	2	515.290017	1028.56548	2.3825	0.0012277	0.22893	0.00011797	2.6114	0.0013456	515.2899766751246	60.97	0.408	60.97	60.734	61.142	0					37	12	4	0	0	0	0.033794	2	25413	25366;25413		81.613	25.436	1	8962200			33121	1932	16294	16360	38425;38426	38426					0.05234046822897653
SVITQVFHV	9	Unmodified	_SVITQVFHV_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.2922241091728	2	515.290017	1028.56548	2.3922	0.0012327	1.5859	0.00081722	3.9782	0.0020499	515.2908606811005	60.29	0.47408	60.618	60.381	60.856	0.32809					39	14	4	0	0	0	0.026628	3	25306	25218;25268;25306		92.822	38.049	1	7089700			33122	1932	16294	16360	38427;38428;38429	38429					0.05234046822897653
SVITQVFHV	9	Unmodified	_SVITQVFHV_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7931396365166	2	515.290017	1028.56548	2.3539	0.001213	-0.74876	-0.00038583	1.6052	0.00082712	515.289878860816	59.004	0.94597	60.424	60.23	61.176	1.4196					87	30	5	0	0	0	0.045797	2	24710	24710;24754		71.134	5.8986	1	19368000			33123	1932	16294	16360	38430;38431	38430					0.05234046822897653
SVITQVFHV	9	Unmodified	_SVITQVFHV_					0	0	0		nc|ENSG00000115677|Q00341-2|HDLBP;ENSG00000115677|ENST00000310931|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	nc|ENSG00000115677|Q00341-2|HDLBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2908813357353	2	515.290017	1028.56548	2.0041	0.0010327	-0.35841	-0.00018468	1.6457	0.000848	515.2898503387722	58.49	0.56753	60.459	60.247	60.814	1.969					49	18	4	0	0	0	0.033794	3	24532	24483;24532;24585		81.613	26.84	1	14794000			33124	1932	16294	16360	38432;38433;38434	38433					0.05234046822897653
SVKMKKGK	8	Unmodified	_SVKMKKGK_					0	0	0			REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	453.2868224978447	2	453.28368	904.552807	1.5646	0.00070923	3.6211	0.0016414	5.1857	0.0023506	453.28520046301355	70.288	1.1677	70.288	69.675	70.842	0					85	37	3	0	0	0	0.89178	3	29166	29166;29208;29262		0.69038	0	1	3472100	+		33125	15039	16295	16361	38435;38436;38437	38435					0.09671312159014178
SVKMKKGK	8	Unmodified	_SVKMKKGK_					0	0	0			REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	453.28368	904.552807	2.2018	0.00099806	4.5699	0.0020715	6.7717	0.0030695	453.28548631292506	69.121	0.61017	70.486	70.091	70.701	1.3657	0.077164	0.00038791	NaN	0.69038	31	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1423700	+		33126	15039	16295	16361							0.09671312159014178
SVKMKKGK	8	Unmodified	_SVKMKKGK_					0	0	0			REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	REV__tr|A0A553SN12|A0A553SN12_NIACIATP-dependentRNAhelicaseDbpAOS=NialliacirculansOX=1397GN=dbpAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	453.28368	904.552807	1.9483	0.00088315	4.2958	0.0019472	6.2441	0.0028304	453.2854878316433	68.629	0.37476	70.481	70.152	70.527	1.853	0.072321	0.0001394	NaN	0.69038	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	786250	+		33127	15039	16295	16361							0.09671312159014178
SVLGAITSV	9	Unmodified	_SVLGAITSV_					0	0	0		ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant;nc|ENSG00000120705|P62495-2|ETF1;ENSG00000120705|ENST00000360541|ETF1	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	846.4913207888603	1	846.49311	845.485833	2.0695	0.0017518	-2.3188	-0.0019628	-0.24931	-0.00021104	846.4909494073977	60.056	0.40012	60.056	59.827	60.227	0					21	13	2	0	0	0	0.01454	2	25059	25009;25059		103.75	14.845	1	3188800			33128	2114	16296	16362	38438;38439	38439					0.05690980148892777
SVLGAITSV	9	Unmodified	_SVLGAITSV_					0	0	0		ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant;nc|ENSG00000120705|P62495-2|ETF1;ENSG00000120705|ENST00000360541|ETF1	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	846.4955932497978	1	846.49311	845.485833	2.4017	0.0020331	-0.22313	-0.00018887	2.1786	0.0018442	846.4930330881997	59.499	0.37778	59.825	59.649	60.027	0.32554					24	11	3	0	0	0	0.026836	3	24949	24902;24949;24992		92.491	21.036	1	3282100			33129	2114	16296	16362	38440;38441;38442	38441					0.05690980148892777
SVLGAITSV	9	Unmodified	_SVLGAITSV_					0	0	0		ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant;nc|ENSG00000120705|P62495-2|ETF1;ENSG00000120705|ENST00000360541|ETF1	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	846.4941284060478	1	846.49311	845.485833	0.57104	0.00048338	0.2658	0.000225	0.83684	0.00070838	846.4932172696392	58.349	0.33192	59.767	59.609	59.941	1.4181					25	10	3	0	0	0	0.01454	3	24484	24435;24484;24535		103.75	14.845	1	10994000			33130	2114	16296	16362	38443;38444;38445	38444					0.05690980148892777
SVLGAITSV	9	Unmodified	_SVLGAITSV_					0	0	0		ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant;nc|ENSG00000120705|P62495-2|ETF1;ENSG00000120705|ENST00000360541|ETF1	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	ETF1|p.E167Dfs*28|1|0.09|ENSG00000120705|chr5:138513608-138513609|-/CG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	846.4922363162041	1	846.49311	845.485833	0.27534	0.00023308	-0.49318	-0.00041748	-0.21784	-0.0001844	846.4928472348948	57.774	0.36536	59.743	59.628	59.993	1.969					21	12	2	0	0	0	0.0044745	2	24216	24216;24263		123.45	23.079	1	5581200			33131	2114	16296	16362	38446;38447	38446					0.05690980148892777
SVLGALIGV	9	Unmodified	_SVLGALIGV_					0	0	0		nc|ENSG00000164051|Q96ER9-2|CCDC51;ENSG00000164051|ENST00000395694|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	828.5177490115166	1	828.518931	827.511654	1.9889	0.0016478	-0.56223	-0.00046582	1.4266	0.001182	828.5189647849356	81.156	0.34158	81.156	80.977	81.319	0					17	10	2	0	0	0	0.09539	1	33790	33790		50.855	12.704	1	998640			33132	3743	16297	16363	38448	38448					0.09099874391188223
SVLGALIGV	9	Unmodified	_SVLGALIGV_					0	0	0		nc|ENSG00000164051|Q96ER9-2|CCDC51;ENSG00000164051|ENST00000395694|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	828.5213500857353	1	828.518931	827.511654	1.9699	0.0016321	-0.49424	-0.00040949	1.4757	0.0012226	828.5186408978087	80.678	0.31194	80.968	80.809	81.121	0.29056					15	9	2	0	0	0	0.09539	1	33717	33717		50.855	14.811	1	927640			33133	3743	16297	16363	38449	38449					0.09099874391188223
SVLGALIGV	9	Unmodified	_SVLGALIGV_					0	0	0		nc|ENSG00000164051|Q96ER9-2|CCDC51;ENSG00000164051|ENST00000395694|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	828.5204955935478	1	828.518931	827.511654	2.4098	0.0019966	0.04682	3.8791E-05	2.4567	0.0020354	828.5190156514935	79.692	0.30976	80.944	80.8	81.109	1.2512					22	9	3	0	0	0	0.0082953	2	33482	33434;33482		109.63	38.914	1	3590100			33134	3743	16297	16363	38450;38451	38451					0.09099874391188223
SVLGALIGV	9	Unmodified	_SVLGALIGV_					0	0	0		nc|ENSG00000164051|Q96ER9-2|CCDC51;ENSG00000164051|ENST00000395694|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	nc|ENSG00000164051|Q96ER9-2|CCDC51	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	828.5167724490166	1	828.518931	827.511654	1.6017	0.001327	-0.4518	-0.00037432	1.1499	0.0009527	828.5184177721059	79.224	0.33977	80.959	80.753	81.093	1.735					23	10	3	0	0	0	0.046276	2	33196	33196;33242		70.716	17.14	1	2799500			33135	3743	16297	16363	38452;38453	38452					0.09099874391188223
SVLGKIWKL	9	Unmodified	_SVLGKIWKL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;ENSG00000013016|ENST00000322054|EHD3	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.5592834353447	3	348.558577	1042.6539	0.73282	0.00025543	1.0024	0.00034939	1.7352	0.00060482	348.5588329307744	50.568	0.45594	51.962	51.77	52.226	1.3938					21	14	2	0	0	0	0.71759	1	21165	21165		6.6304	4.1319	1	755270			33136	1445	16298	16364	38454	38454					0.13428087133365807
SVLGKIWKL	9	Unmodified	_SVLGKIWKL_					0	0	0		ENSG00000103966|ENST00000220325|EHD4;ENSG00000013016|ENST00000322054|EHD3	ENSG00000103966|ENST00000220325|EHD4	ENSG00000103966|ENST00000220325|EHD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	348.558577	1042.6539	1.1977	0.00041748	1.3036	0.00045437	2.5013	0.00087185	348.5589982717264	49.974	0.31174	51.951	51.758	52.07	1.9772	-0.0056033	0.00023246	NaN	6.6304	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	615800			33137	1445	16298	16364							0.13428087133365807
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4379150271416	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.96	1	102.96	102.46	103.46	0								0	0	0	0.63775	1	43162	43162		0	0	1				33138	6268	16299	16365	38455	38455					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4421874880791	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.21	1	103.21	102.71	103.71	0								0	0	0	0.63775	1	43283	43283		0	0	1				33139	6268	16299	16365	38456	38456					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4416381716728	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.37	102.87	103.87	0								0	0	0	0.63775	1	43372	43372		0	0	1				33140	6268	16299	16365	38457	38457					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4440185427666	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.59	1	103.59	103.09	104.09	0								0	0	0	0.63775	1	43518	43518		0	0	1				33141	6268	16299	16365	38458	38458					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4440185427666	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.82	1	103.82	103.32	104.32	0								0	0	0	0.63775	1	43681	43681		0	0	1				33142	6268	16299	16365	38459	38459					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4428588747978	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.03	103.53	104.53	0								0	0	0	0.63775	1	43824	43824		0	0	1				33143	6268	16299	16365	38460	38460					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4391967654228	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.13	1	104.13	103.63	104.63	0								0	0	0	0.63775	1	43894	43894		0	0	1				33144	6268	16299	16365	38461	38461					0.2591000887828159
SVLILVIVKKK	11	Unmodified	_SVLILVIVKKK_					0	0	0		ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	ENST00000393214.2_1_X:73596212-73596416:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	620.4428588747978	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.53	1	104.53	104.03	105.03	0								0	0	0	0.63775	1	44138	44138		0	0	1				33145	6268	16299	16365	38462	38462					0.2591000887828159
SVLIWKHPLC	10	Unmodified	_SVLIWKHPLC_					0	0	0		ENST00000319211.4_1_5:76030363-76030621:+|nuORF	ENST00000319211.4_1_5:76030363-76030621:+|nuORF	ENST00000319211.4_1_5:76030363-76030621:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3812744021416	2	598.336444	1194.65834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.19	1	100.39	99.891	100.89	0.20527								0	0	0	0.66166	1	42133	42133		1.6526	0	1				33146	5840	16300	16366	38463	38463					0.0687922828462888
SVLKFNYFWS	10	Unmodified	_SVLKFNYFWS_					0	0	0		ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF	ENST00000561539.1_1_16:28836974-28837213:+|nuORF	ENST00000561539.1_1_16:28836974-28837213:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890869021416	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.059	1	31.059	30.559	31.559	0								0	0	0	0.66254	1	13011	13011		0.15932	0	1				33147	7335	16301	16367	38464	38464					0.011222740571838585
SVLKFNYFWS	10	Unmodified	_SVLKFNYFWS_					0	0	0		ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF	ENST00000561539.1_1_16:28836974-28837213:+|nuORF	ENST00000561539.1_1_16:28836974-28837213:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890563845634	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.956	1	31.956	31.456	32.456	0								0	0	0	0.66254	1	13386	13386		0.15932	0	1				33148	7335	16301	16367	38465	38465					0.011222740571838585
SVLKNNLCP	9	Unmodified	_SVLKNNLCP_					0	0	0		ENST00000531840.1_1_11:2416972-2417500:+|nuORF;ENST00000468153.1_1_11:2416081-2418093:+|nuORF;ENSG00000110651|ENST00000263645|CD81	ENST00000531840.1_1_11:2416972-2417500:+|nuORF	ENST00000531840.1_1_11:2416972-2417500:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	494.3242675662041	2	494.268227	986.521901	2.7281	0.0013484	-1.464	-0.00072362	1.264	0.00062477	494.26701449866664	64.144	0.21662	65.551	65.433	65.65	1.4071					10	6	2	0	0	0	0.11463	1	26853	26853		12.532	2.3482	1	410590			33149	1709	16302	16368	38466	38466					0.028101140541025416
SVLKNNLCP	9	Unmodified	_SVLKNNLCP_					0	0	0		ENST00000531840.1_1_11:2416972-2417500:+|nuORF;ENST00000468153.1_1_11:2416081-2418093:+|nuORF;ENSG00000110651|ENST00000263645|CD81	ENST00000531840.1_1_11:2416972-2417500:+|nuORF	ENST00000531840.1_1_11:2416972-2417500:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	494.268227	986.521901	2.7577	0.0013631	-2.74	-0.0013543	0.017709	8.753E-06	494.26688784288217	63.584	0.28281	65.528	65.377	65.66	1.9444	-0.011075	-0.00027546	NaN	12.532	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	411880			33150	1709	16302	16368							0.028101140541025416
SVLMAQRLLF	10	Unmodified	_SVLMAQRLLF_					0	0	0		MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|5|1|sense	MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|5|1|sense	MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|5|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3445922732353	2	589.341726	1176.6689	2.8028	0.0016518	1.6979	0.0010006	4.5007	0.0026524	589.3424328799648	73.443	1.6816	75.239	74.56	76.242	1.7962					102	53	3	0	0	0	0.83529	1	30711	30711		9.3831	2.66	1	2043500			33151	7793	16303	16369	38467	38467					0.08763210939059718
SVLMLLMAF	9	Unmodified	_SVLMLLMAF_					0	0	0			REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	REV__ENST00000554074.1_1_14:78174487-78178182:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.2333862185478	2	512.782124	1023.5497	3.2018	0.0016418	-1.4485	-0.00074278	1.7533	0.00089906	512.7819088833608	82.882	0.366	84.095	83.889	84.255	1.2125					17	11	2	0	0	0	0.11645	1	34759	34759		8.5933	0.68312	1	1270400	+		33152	13849	16304	16370	38468	38468					0.038863009899955614
SVLRHKVH	8	Unmodified	_SVLRHKVH_					0	0	0			REV__ENSG00000125531|ENST00000370097|FNDC11	REV__ENSG00000125531|ENST00000370097|FNDC11	MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2963744997978	2	488.295968	974.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.879	1	19.327	18.827	19.827	1.448								0	0	0	1.0178	1	7429	7429		2.5775	0	1		+		33153	9669	16305	16371	38469	38469					0.08907708356753119
SVLVLGVGR	9	Unmodified	_SVLVLGVGR_					0	0	0		ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENST00000546481.1_1_12:57881846-57882986:+|nuORF	ENST00000546481.1_1_12:57881846-57882986:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1270019412041	3	300.527277	898.560001	0.073112	2.1972E-05	0.3961	0.00011904	0.46922	0.00014101	300.52741384229154	23.339	0.68928	23.572	23.219	23.908	0.23306					29	21	2	0	0	0	0.11954	1	9860	9860		0	0	1	452290			33154	7244	16306	16372	38470	38470					0.10666368031104412
SVLVPNKLNLV	11	Unmodified	_SVLVPNKLNLV_					0	0	0			REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	REV__tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2508727908134	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13	1	13.828	13.328	14.328	0.82789								0	0	0	0.63775	1	5391	5391		1.4551	0.67859	1		+		33155	14761	16307	16373	38471	38471					0.14403109016689086
SVMELLQGV	9	Unmodified	_SVMELLQGV_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MSMS	GG20161007_CRH_Patient100_A02_01	1	488.2608520388603	2	488.26261	974.510668	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.405	1	76.405	75.905	76.905	0								0	0	0	0.061573	1	31809	31809		42.095	7.9921	1				33156	2519	16308	16374	38472	38472					0.022392919599724337
SVMELLQGV	9	Unmodified	_SVMELLQGV_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2630798220634	2	488.26261	974.510668	3.0448	0.0014866	-2.4263	-0.0011846	0.6185	0.00030199	488.26128032947173	76.015	0.30949	76.337	76.144	76.453	0.32163					15	9	2	0	0	0	0.09539	1	31804	31804		50.855	16.753	1	1065900			33157	2519	16308	16374	38473	38473					0.022392919599724337
SVMELLQGV	9	Unmodified	_SVMELLQGV_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2632324099541	2	488.26261	974.510668	3.0477	0.0014881	-0.74886	-0.00036564	2.2988	0.0011224	488.2628468832481	75.005	0.40327	76.311	76.09	76.493	1.3063					28	12	3	0	0	0	0.042029	1	31445	31445		74.423	10.186	1	2424300			33158	2519	16308	16374	38474	38474					0.022392919599724337
SVMELLQGV	9	Unmodified	_SVMELLQGV_					0	0	0		nc|ENSG00000132256|Q9C035-2|TRIM5;ENSG00000132256|ENST00000380034|TRIM5;nc|ENSG00000132256|Q9C035-4|TRIM5;nc|ENSG00000132256|Q9C035-3|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	nc|ENSG00000132256|Q9C035-2|TRIM5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2634460330009	2	488.26261	974.510668	2.9142	0.0014229	-2.2407	-0.001094	0.6735	0.00032884	488.2622305459752	74.526	0.47553	76.322	76.114	76.589	1.7962					28	14	3	0	0	0	0.076627	1	31268	31268		57.471	9.1255	1	2081000			33159	2519	16308	16374	38475	38475					0.022392919599724337
SVMGNIIHV	9	Unmodified	_SVMGNIIHV_					0	0	0		nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718|ENST00000604567|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2614318728447	2	485.262945	968.511337	2.4893	0.001208	-0.77167	-0.00037446	1.7176	0.0008335	485.2618725873761	49.18	0.20816	49.51	49.414	49.623	0.33019					9	6	2	0	0	0	0.46905	1	20627	20627		16.942	6.7589	1	691520			33160	2889	16309	16375	38476	38476					0.025821313996971185
SVMGNIIHV	9	Unmodified	_SVMGNIIHV_					0	0	0		nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718|ENST00000604567|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2620117068291	2	485.262945	968.511337	2.3615	0.0011459	-2.4193	-0.001174	-0.057868	-2.8081E-05	485.26136159546996	47.695	0.28183	49.077	48.922	49.204	1.3825					19	8	3	0	0	0	0.37357	2	19932	19932;19980		21.747	8.2388	1	1351200			33161	2889	16309	16375	38477;38478	38477					0.025821313996971185
SVMGNIIHV	9	Unmodified	_SVMGNIIHV_					0	0	0		nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718|ENST00000604567|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2629577517509	2	485.262945	968.511337	2.4168	0.0011728	-2.3594	-0.0011449	0.057357	2.7833E-05	485.26122515227513	47.165	0.27995	49.141	49.031	49.311	1.976					16	8	2	0	0	0	0.34572	2	19738	19738;19786		23.148	12.965	1	1494300			33162	2889	16309	16375	38479;38480	38479					0.025821313996971185
SVMGNIIHV	9	Unmodified	_SVMGNIIHV_					0	0	0		nc|ENSG00000139718|Q9UPS6-2|SETD1B;ENSG00000139718|ENST00000604567|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	nc|ENSG00000139718|Q9UPS6-2|SETD1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	485.262945	968.511337	2.0731	0.001006	-1.4817	-0.00071901	0.59142	0.00028699	485.2615896880092	49.779	0.27756	49.779	49.625	49.903	0	0.13454	-0.00025631	NaN	16.942	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491500			33163	2889	16309	16375							0.025821313996971185
SVMSILPKI	9	Unmodified	_SVMSILPKI_					0	0	0		ENSG00000111897|ENST00000339697|SERINC1	ENSG00000111897|ENST00000339697|SERINC1	ENSG00000111897|ENST00000339697|SERINC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	494.3242675662041	2	494.298996	986.583439	2.7403	0.0013545	0.38804	0.00019181	3.1283	0.0015463	494.29894454340814	64.114	0.27622	65.522	65.433	65.71	1.4071					12	8	2	0	0	0	0.080611	1	26853	26853		34.402	16.267	1	646060			33164	1762	16310	16376	38481	38481					0.08961045753392227
SVMSILPKI	9	Unmodified	_SVMSILPKI_					0	0	0		ENSG00000111897|ENST00000339697|SERINC1	ENSG00000111897|ENST00000339697|SERINC1	ENSG00000111897|ENST00000339697|SERINC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	494.298996	986.583439	2.7975	0.0013828	-0.03954	-1.9545E-05	2.758	0.0013633	494.2987012780142	63.608	0.28054	65.552	65.409	65.69	1.9444	0.015275	-0.00030325	NaN	34.402	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	892410			33165	1762	16310	16376							0.08961045753392227
SVMWIKEMEK	10	Unmodified	_SVMWIKEMEK_					0	0	0		tr|A0A7D6VTT8|A0A7D6VTT8_9CLOTAlpha/betafoldhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12745PE=4SV=1	tr|A0A7D6VTT8|A0A7D6VTT8_9CLOTAlpha/betafoldhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12745PE=4SV=1	tr|A0A7D6VTT8|A0A7D6VTT8_9CLOTAlpha/betafoldhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12745PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.5514709353447	3	427.550765	1279.63047	-0.16706	-7.1427E-05	1.5845	0.00067745	1.4174	0.00060602	427.8853877992535	14.587	0.30793	14.587	14.442	14.75	0					22	9	3	0	0	0	0.8251	1	6059	6059		9.544	3.3521	1	1191000			33166	16929	16311	16377	38482	38482					0.0018353724221924494
SVNAPAMDP	9	Unmodified	_SVNAPAMDP_					0	0	0			REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416503787041	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4561	1	5.0773	4.5773	5.5773	0.62127								0	0	0	0.42693	1	1840	1840		1.1933	0.735	1		+		33167	8708	16312	16378	38483	38483					-0.05306713659365414
SVNAPAMDP	9	Unmodified	_SVNAPAMDP_					0	0	0			REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1417114138603	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.479	1	2.2274	1.7274	2.7274	0.7484								0	0	0	0.42693	1	612	612		1.1933	0.735	1		+		33168	8708	16312	16378	38484	38484					-0.05306713659365414
SVNAPAMDP	9	Unmodified	_SVNAPAMDP_					0	0	0			REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	REV__ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415283083916	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1137	1	7.8444	7.3444	8.3444	0.73074								0	0	0	0.42693	1	2954	2954		1.1933	0.735	1		+		33169	8708	16312	16378	38485	38485					-0.05306713659365414
SVPAGIGG	8	Unmodified	_SVPAGIGG_					0	0	0			REV__nc|ENSG00000158062|Q5T124-6|UBXN11	REV__nc|ENSG00000158062|Q5T124-6|UBXN11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3566161990166	1	657.356616	656.34934	0.22589	0.00014849	0.9128	0.00060004	1.1387	0.00074852	657.3572164753986	16.964	0.42911	17.862	17.708	18.137	0.89794					22	14	2	0	0	0	0.88163	1	7116	7116		7.9102	2.1497	1	540470	+		33170	10547	16313	16379	38486	38486					0.007419107090527177
SVPATPGRR	9	Unmodified	_SVPATPGRR_					0	0	0		ENSG00000233436|ENST00000422652|BTBD18	ENSG00000233436|ENST00000422652|BTBD18	ENSG00000233436|ENST00000422652|BTBD18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	314.7121154665947	3	314.182281	939.525013	-0.027056	-8.5004E-06	0.32465	0.000102	0.29759	9.3498E-05	314.1817264432673	23.033	1.0117	24.247	23.889	24.901	1.2145					40	32	2	0	0	0	0.11909	1	9656	9656		0.20686	0	1	482260			33171	5309	16314	16380	38487	38487					0.05283125223149909
SVPDIPKEHFG	11	Unmodified	_SVPDIPKEHFG_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7;DOCK7|p.E307Afs*4|1|0.05|ENSG00000116641|chr1:62634888-62634889|-/AG|frameshift_variant	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3138305544853	2	613.31422	1224.61389	2.4381	0.0014953	-2.9513	-0.0018101	-0.51314	-0.00031472	613.3127095341974	44.947	0.44527	46.313	46.118	46.563	1.3653					21	13	2	0	0	0	0.87205	2	18828	18828;18891		11.495	0.67078	1	593410			33172	1975	16315	16381	38488;38489	38488					0.010564956721282215
SVPDIPKEHFG	11	Unmodified	_SVPDIPKEHFG_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;nc|ENSG00000116641|Q96N67-7|DOCK7;DOCK7|p.E307Afs*4|1|0.05|ENSG00000116641|chr1:62634888-62634889|-/AG|frameshift_variant	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3152953982353	2	613.31422	1224.61389	1.9562	0.0011997	-2.9135	-0.0017869	-0.9573	-0.00058713	613.3126516348325	44.669	0.70458	46.628	46.223	46.928	1.9596					36	21	3	0	0	0	0.87205	1	18692	18692		11.495	0.67078	1	621750			33173	1975	16315	16381	38490	38490					0.010564956721282215
SVPGPGPLAPP	11	Unmodified	_SVPGPGPLAPP_					0	0	0			REV__AHDC1|p.M539Sfs*46|1|0.61|ENSG00000126705|chr1:27550500-27550500|A/-|frameshift_variant	REV__AHDC1|p.M539Sfs*46|1|0.61|ENSG00000126705|chr1:27550500-27550500|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7808715701103	2	494.776742	987.538931	2.7589	0.001365	3.9727	0.0019656	6.7315	0.0033306	494.77904099383574	81.734	0.64712	82.015	81.812	82.459	0.2802					50	20	4	0	0	0	1.0131	1	34177	34177		2.9952	0.10602	1	15408000	+		33174	8094	16316	16382	38491	38491					0.044663579315511015
SVPPGVRR	8	Unmodified	_SVPPGVRR_					0	0	0			REV__GLI1|p.S937*|1|0.25|ENSG00000111087|chr12:57471546-57471547|-/T|frameshift_variant	REV__GLI1|p.S937*|1|0.25|ENSG00000111087|chr12:57471546-57471547|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2621948122978	2	434.261594	866.508634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.42	1	111.47	110.97	111.97	0.047043								0	0	0	1.0178	1	48043	48043		2.5775	1.7838	1		+		33175	9315	16317	16383	38492	38492					0.07004044057032388
SVQTRDQII	9	Unmodified	_SVQTRDQII_					0	0	0			REV__nc|ENSG00000089127|P00973-3|OAS1	REV__nc|ENSG00000089127|P00973-3|OAS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	529.8077880740166	2	530.293288	1058.57202	2.5739	0.0013649	-1.7629	-0.00093488	0.81092	0.00043002	530.293347326584	75.478	0.15495	75.8	75.71	75.865	0.32163					8	4	2	0	0	0	0.097511	1	31532	31532		11.64	0	1	586230	+		33176	14400	16318	16384	38493	38493					0.04507939983614051
SVRKHLVAER	10	Unmodified	_SVRKHLVAER_					0	0	0		ENSG00000102794|ENST00000377462|ACOD1	ENSG00000102794|ENST00000377462|ACOD1	ENSG00000102794|ENST00000377462|ACOD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8573486208916	2	597.856921	1193.69929	2.1578	0.00129	-0.9659	-0.00057747	1.1919	0.00071257	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.89803	1	32206	32206		1.4819	0	1	9732000			33177	1399	16319	16385	38494	38494					0.11018705648416471
SVRKSSTVT	9	Unmodified	_SVRKSSTVT_					0	0	0		nc|ENSG00000257588|A0A7L8Y648|AQP5-AS1	nc|ENSG00000257588|A0A7L8Y648|AQP5-AS1	nc|ENSG00000257588|A0A7L8Y648|AQP5-AS1	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1868163943291	3	322.185579	963.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.45	1	103.51	103.01	104.01	0.059502								0	0	0	0.42693	1	43392	43392		1.0715	0	1				33178	8011	16320	16386	38495	38495					0.051682684378647537
SVRLLLRLRKL	11	Unmodified	_SVRLLLRLRKL_					0	0	0		ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3165161013603	3	456.317151	1365.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.07	1	94.07	93.57	94.57	0								0	0	0	0.63775	1	39312	39312		0.094841	0.094841	1				33179	6459	16321	16387	38496	38496					0.2612953898124033
SVRLLLRLRKL	11	Unmodified	_SVRLLLRLRKL_					0	0	0		ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3176147341728	3	456.317151	1365.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.113	1	99.113	98.613	99.613	0								0	0	0	0.63775	1	41476	41476		0.094841	0.094841	1				33180	6459	16321	16387	38497	38497					0.2612953898124033
SVRLLLRLRKL	11	Unmodified	_SVRLLLRLRKL_					0	0	0		ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3162109255791	3	456.317151	1365.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.274	1	99.274	98.774	99.774	0								0	0	0	0.63775	1	41546	41546		0.094841	0.094841	1				33181	6459	16321	16387	38498	38498					0.2612953898124033
SVRLLLRLRKL	11	Unmodified	_SVRLLLRLRKL_					0	0	0		ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3167602419853	3	456.317151	1365.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.833	1	98.913	98.413	99.413	0.080376								0	0	0	0.63775	1	41375	41375		0.094841	0.011491	1				33182	6459	16321	16387	38499	38499					0.2612953898124033
SVRLLLRLRKL	11	Unmodified	_SVRLLLRLRKL_					0	0	0		ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	ENST00000424161.5_1_22:28315408-28390635:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3188659548759	3	456.317151	1365.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.94	1	99.021	98.521	99.521	0.080376								0	0	0	0.63775	1	41422	41422		0.094841	0.094841	1				33183	6459	16321	16387	38500	38500					0.2612953898124033
SVRLRPERAK	10	Unmodified	_SVRLRPERAK_					0	0	0			REV__ENSG00000126216|ENST00000261965|TUBGCP3	REV__ENSG00000126216|ENST00000261965|TUBGCP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3725463747978	2	606.370195	1210.72584	2.4698	0.0014976	-0.25012	-0.00015167	2.2197	0.001346	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	0.89803	1	32049	32049		1.4819	0	1	6795700	+		33184	9694	16322	16388	38501	38501					0.12890394539772387
SVRLTISRPP	10	Unmodified	_SVRLTISRPP_					0	0	0			REV__ENST00000552245.5_1_12:99225710-99548222:-|nuORF	REV__ENST00000552245.5_1_12:99225710-99548222:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3435546755791	2	563.340572	1124.66659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.66	1	103.82	103.32	104.32	0.16055								0	0	0	0.6607	1	43747	43747		3.2813	1.7994	1		+		33185	13837	16323	16389	38502	38502					0.10924498525605486
SVRPEKRR	8	Unmodified	_SVRPEKRR_					0	0	0		ENST00000529231.1_8:145488904-145515052:-|nuORF;ENSG00000261236|ENST00000569669|BOP1	ENST00000529231.1_8:145488904-145515052:-|nuORF	ENST00000529231.1_8:145488904-145515052:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2072631716728	3	343.20883	1026.60466	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.89	1	102.89	102.39	103.39	0								0	0	0	1.0178	1	43133	43133		1.4819	0	1				33186	5421	16324	16390	38503	38503					0.0924219189712403
SVRRASTKK	9	Unmodified	_SVRRASTKK_					0	0	0		tr|A0A553SIM6|A0A553SIM6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15155PE=4SV=1	tr|A0A553SIM6|A0A553SIM6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15155PE=4SV=1	tr|A0A553SIM6|A0A553SIM6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_15155PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.2386047244072	3	344.880602	1031.61998	-0.50823	-0.00017528	-1.3234	-0.00045641	-1.8316	-0.00063169	344.8788843302011	19.557	0.62987	20.615	20.164	20.794	1.0585					24	19	2	0	0	0	0.11908	1	8141	8141		0.23584	0	1	383650			33187	16210	16325	16391	38504	38504					0.10543058694315732
SVRRRLRDR	9	Unmodified	_SVRRRLRDR_					0	0	0			REV__ENST00000505604.1_1_5:112437417-112440086:-|nuORF	REV__ENST00000505604.1_1_5:112437417-112440086:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	607.3710815310478	2	607.371061	1212.72757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.78	1	103.84	103.34	104.34	0.059502								0	0	0	0.42693	1	43618	43618		1.8442	0	1		+		33188	13509	16326	16392	38505	38505					0.12971448348412196
SVRRRTRP	8	Unmodified	_SVRRRTRP_					0	0	0			REV__ENST00000316082.4_1_17:40174608-40175085:+|nuORF	REV__ENST00000316082.4_1_17:40174608-40175085:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2106506228447	3	343.212574	1026.61589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.28	1	102.28	101.78	102.78	0								0	0	0	1.0178	1	42851	42851		1.4819	0	1		+		33189	12389	16327	16393	38506	38506					0.1036501399125882
SVRVRRSVL	9	Unmodified	_SVRVRRSVL_					0	0	0			REV__ENST00000468868.1_1_7:48017962-48019116:-|nuORF	REV__ENST00000468868.1_1_7:48017962-48019116:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3434326052666	2	536.340907	1070.66726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.52	1	103.7	103.2	104.2	0.18066								0	0	0	0.42693	1	43607	43607		1.8442	0	1		+		33190	13263	16328	16394	38507	38507					0.13475337965314793
SVSLVTTPAL	10	Unmodified	_SVSLVTTPAL_					0	0	0			REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1	REV__nc|ENSG00000185684|Q6ZTU2-4|EP400P1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2901183962822	2	494.289682	986.564812	1.8595	0.00091913	1.0887	0.00053815	2.9482	0.0014573	494.29023475355007	45.016	0.31618	46.975	46.799	47.115	1.9596					16	9	2	0	0	0	0.65574	1	18896	18896		20.454	1.1966	1	1438000	+		33191	14508	16329	16395	38508	38508					0.0709920738316896
SVSPLAPVLLC	11	Unmodified	_SVSPLAPVLLC_					0	0	0			REV__chr8:143021433-143021527|195|10.31|0.05|7.62|+|0|LY6E,None|2	REV__chr8:143021433-143021527|195|10.31|0.05|7.62|+|0|LY6E,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	549.8137084841728	2	549.81501	1097.61547	1.271	0.00069879	-3.995	-0.0021965	-2.7241	-0.0014977	549.8122135126492	95.905	0.23246	95.905	95.773	96.005	0					17	7	3	0	0	0	0.74096	1	40086	40086		17.113	0	1	7476200	+		33192	8342	16330	16396	38509	38509					0.07056413436544062
SVSTSHGE	8	Unmodified	_SVSTSHGE_					0	0	0		chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1805908083916	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.518	1	30.518	30.018	31.018	0								0	0	0	1.0178	1	12781	12781		0.69038	0	1				33193	239	16331	16397	38510	38510					-0.06336803855458584
SVSTSHGE	8	Unmodified	_SVSTSHGE_					0	0	0		chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	chr2:208129683-208129784|162|30.43|0.05|9.33|-|2|CRYGC,CRYGC|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1810790896416	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.075	1	31.075	30.575	31.575	0								0	0	0	1.0178	1	13018	13018		2.5775	0	1				33194	239	16331	16397	38511	38511					-0.06336803855458584
SVTDLIITL	9	Unmodified	_SVTDLIITL_					0	0	0		FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant;FAT2|p.Y3462Tfs*16|1|0.49|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant;ENSG00000086570|ENST00000261800|FAT2	FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5796996951103	1	974.576839	973.569563	2.4872	0.002424	-1.8972	-0.001849	0.59003	0.00057503	974.5755343236692	85.338	0.31496	85.338	85.164	85.479	0					18	9	3	0	0	0	0.076627	1	35567	35567		57.471	9.1255	1	991440			33195	1074	16332	16398	38512	38512					0.08172091525955238
SVTDLIITL	9	Unmodified	_SVTDLIITL_					0	0	0		FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant;FAT2|p.Y3462Tfs*16|1|0.49|ENSG00000086570|chr5:151525891-151525891|G/-|frameshift_variant;ENSG00000086570|ENST00000261800|FAT2	FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	FAT2|p.T2083Sfs*59|1|0.04|ENSG00000086570|chr5:151544880-151544881|-/CTCCTCCATCCCGA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	974.576839	973.569563	2.594	0.0025281	-5.4493	-0.0053108	-2.8553	-0.0027827	974.5717723991274	84.918	0.62862	85.179	84.951	85.58	0.26083	-0.079535	-0.00272	NaN	57.471	24	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708990			33196	1074	16332	16398							0.08172091525955238
SVTKKRQLK	9	Unmodified	_SVTKKRQLK_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3517944216728	2	544.35094	1086.68733	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.59	1	101.76	101.26	102.26	0.17032								0	0	0	0.42693	1	42746	42746		1.6526	0	1				33197	3303	16333	16399	38513	38513					0.14745088905260673
SVTLSAWLV	9	Unmodified	_SVTLSAWLV_					0	0	0		ENST00000300584.7_1_15:78290103-78290292:-|nuORF	ENST00000300584.7_1_15:78290103-78290292:-|nuORF	ENST00000300584.7_1_15:78290103-78290292:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	975.5544311404228	1	975.550959	974.543683	2.6537	0.0025888	2.8303	0.0027611	5.484	0.0053499	975.5531304947564	80.321	0.34131	81.572	81.357	81.698	1.2512					23	10	3	0	0	0	0.12174	1	33714	33714		42.095	7.9921	1	1795900			33198	5755	16334	16400	38514	38514					0.05539242074326012
SVYDEAVKQF	10	Unmodified	_SVYDEAVKQF_					0	0	0			REV__ENST00000471466.5_1_5:176728746-176728995:-|nuORF	REV__ENST00000471466.5_1_5:176728746-176728995:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	593.2916747927666	2	593.292953	1184.57135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.129	1	66.057	65.557	66.557	1.928								0	0	0	0.65378	1	26905	26905		10.824	2.2306	1		+		33199	10939	16335	16401	38515	38515					-0.013548994561233485
SWADLRDVLF	10	Unmodified	_SWADLRDVLF_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3168212771416	2	611.316763	1220.61897	2.8004	0.0017119	-1.0642	-0.00065057	1.7362	0.0010614	611.3160064794507	80.886	0.24249	82.119	81.983	82.225	1.2332					13	7	2	0	0	0	0.32544	1	33954	33954		37.771	14.623	1	1555600			33200	2806	16336	16402	38516	38516					0.01748799534743739
SWADLRDVLF	10	Unmodified	_SWADLRDVLF_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3169433474541	2	611.316763	1220.61897	1.531	0.0009359	-0.46233	-0.00028263	1.0686	0.00065328	611.3169306859076	80.435	0.32755	82.152	81.996	82.324	1.7167					19	10	2	0	0	0	0.38475	1	33782	33782		34.222	20.316	1	1153100			33201	2806	16336	16402	38517	38517					0.01748799534743739
SWAFANLS	8	Unmodified	_SWAFANLS_					0	0	0		LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant;ENSG00000166159|ENST00000299194|LRTM2	LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant	LRTM2|p.M246Sfs*13|1|0.34|ENSG00000166159|chr12:1834344-1834345|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2197753787041	2	448.21906	894.423567	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.69	1	104.74	104.24	105.24	0.056801								0	0	0	1.0178	1	44208	44208		5.2307	2.6532	1				33202	3883	16337	16403	38518	38518					-0.027867461994446785
SWAPPLERSK	10	Unmodified	_SWAPPLERSK_					0	0	0		SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant;ENSG00000119899|ENST00000355773|SLC17A5;ENST00000481996.1_1_6:74344990-74351530:-|nuORF;nc|ENSG00000119899|Q9NRA2-2|SLC17A5	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	3	390.880379	1169.61931	-0.48791	-0.00019072	2.0204	0.00078972	1.5324	0.000599	390.88126832025205	30.631	1.0941	30.631	30.347	31.441	0					74	35	3	0	0	0	0.12535	1	12940	12940		3.5871	2.9602	1	3630900			33203	2088	16338	16404	38519	38519					0.04128219254607757
SWARLRRG	8	Unmodified	_SWARLRRG_					0	0	0		ENST00000395091.2_1_16:30569644-30569812:-|nuORF	ENST00000395091.2_1_16:30569644-30569812:-|nuORF	ENST00000395091.2_1_16:30569644-30569812:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2899047732353	2	501.291217	1000.56788	2.3769	0.0011915	-1.4706	-0.00073718	0.90633	0.00045433	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.88791	1	28068	28068		3.9444	0	1	2426300			33204	6287	16339	16405	38520	38520					0.06761940071226036
SWASLSMLL	9	Unmodified	_SWASLSMLL_					0	0	0		Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1007.526721179485	1	1007.52303	1006.51575	2.2982	0.0023155	-0.67467	-0.00067974	1.6236	0.0016358	1007.523141399812	90.061	0.35121	90.061	89.905	90.256	0					16	10	2	0	0	0	0.24063	1	37684	37684		28.487	0	1	1267300			33205	7612	16340	16406	38521	38521					0.012755958225966424
SWASLSMLL	9	Unmodified	_SWASLSMLL_					0	0	0		Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1007.522875964642	1	1007.52303	1006.51575	2.8853	0.002907	-1.6618	-0.0016743	1.2234	0.0012326	1007.5214331922599	89.577	0.31938	89.801	89.615	89.935	0.2236					20	9	3	0	0	0	0.09539	1	37548	37548		50.855	2.5092	1	1512200			33206	7612	16340	16406	38522	38522					0.012755958225966424
SWASLSMLL	9	Unmodified	_SWASLSMLL_					0	0	0		Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|33|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1007.530444324017	1	1007.52303	1006.51575	4.8364	0.0048728	-1.8712	-0.0018853	2.9652	0.0029875	1007.5200540503535	88.258	0.28428	89.704	89.572	89.856	1.4467					11	8	2	0	0	0	0.24063	1	37223	37223		28.487	6.7402	1	1309100			33207	7612	16340	16406	38523	38523					0.012755958225966424
SWKIRPASTW	10	Unmodified	_SWKIRPASTW_					0	0	0		ENST00000524814.5_1_11:67196016-67200434:+|nuORF	ENST00000524814.5_1_11:67196016-67200434:+|nuORF	ENST00000524814.5_1_11:67196016-67200434:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	411.2247802615166	3	411.224257	1230.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.01	1	61.34	60.84	61.84	0.32974								0	0	0	0.66193	1	25562	25562		0.50596	0	1				33208	7112	16341	16407	38524	38524					0.04484212008560462
SWKIRPASTW	10	Unmodified	_SWKIRPASTW_					0	0	0		ENST00000524814.5_1_11:67196016-67200434:+|nuORF	ENST00000524814.5_1_11:67196016-67200434:+|nuORF	ENST00000524814.5_1_11:67196016-67200434:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	411.2242614626884	3	411.224257	1230.65094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.117	1	61.447	60.947	61.947	0.32974								0	0	0	0.66193	1	25607	25607		0.50596	0.17668	1				33209	7112	16341	16407	38525	38525					0.04484212008560462
SWKVRTLL	8	Unmodified	_SWKVRTLL_					0	0	0		ENST00000358556.8_1_4:148402081-148402264:+|nuORF	ENST00000358556.8_1_4:148402081-148402264:+|nuORF	ENST00000358556.8_1_4:148402081-148402264:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8078185915947	2	501.808377	1001.6022	2.2765	0.0011424	-3.1211	-0.0015662	-0.84457	-0.00042381	501.80662193423024	78.338	1.092	78.648	78.227	79.319	0.30933					73	34	3	0	0	0	0.88587	1	32841	32841		5.2307	0.90143	1	2355400			33210	6013	16342	16408	38526	38526					0.10146343439475913
SWMELPGLKF	10	Unmodified	_SWMELPGLKF_					0	0	0		ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2;OSGIN2|p.Y428Sfs*2|1|0.07|ENSG00000164823|chr8:89925297-89925297|A/-|frameshift_variant	ENSG00000164823|ENST00000451899|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3143188357353	2	604.312635	1206.61072	2.7336	0.001652	-1.1831	-0.00071495	1.5505	0.00093702	604.3116250528961	79.484	0.37408	80.735	80.52	80.895	1.2512					28	11	3	0	0	0	0.19531	1	33355	33355		49.554	31.408	1	1375900			33211	3800	16343	16409	38527	38527					0.01567529293743064
SWMELPGLKF	10	Unmodified	_SWMELPGLKF_					0	0	0		ENSG00000164823|ENST00000451899|OSGIN2;nc|ENSG00000164823|Q9Y236|OSGIN2;OSGIN2|p.Y428Sfs*2|1|0.07|ENSG00000164823|chr8:89925297-89925297|A/-|frameshift_variant	ENSG00000164823|ENST00000451899|OSGIN2	ENSG00000164823|ENST00000451899|OSGIN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.8154785037041	2	604.312635	1206.61072	2.088	0.0012618	-0.71523	-0.00043222	1.3728	0.0008296	604.8140434167098	78.998	0.33955	80.733	80.506	80.846	1.735					23	10	3	0	0	0	0.10014	1	33126	33126		63.961	45.814	1	1518200			33212	3800	16343	16409	38528	38528					0.01567529293743064
SWPDWALPRL	10	Unmodified	_SWPDWALPRL_					0	0	0		ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.8286620974541	2	620.827298	1239.64004	2.4871	0.001544	1.0091	0.00062647	3.4962	0.0021705	620.8277290918252	78.975	0.81297	80.241	79.817	80.63	1.2668					64	25	3	0	0	0	0.19531	2	33105	33105;33156		49.554	24.155	1	3810800			33213	3313	16344	16410	38529;38530	38529					0.029808096342549106
SWPDWALPRL	10	Unmodified	_SWPDWALPRL_					0	0	0		ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.8293334841728	2	620.827298	1239.64004	1.8143	0.0011264	1.1604	0.0007204	2.9747	0.0018468	620.8279405512887	78.538	0.65191	80.273	79.761	80.413	1.735					51	20	3	0	0	0	0.25725	2	32896	32896;32942		41.956	22.699	1	5159200			33214	3313	16344	16410	38531;38532	38531					0.029808096342549106
SWQVAVPVL	9	Unmodified	_SWQVAVPVL_					0	0	0		ENST00000569969.5_2_16:28995606-28996332:+|nuORF;nc|ENSG00000213658|O43561-3|LAT	ENST00000569969.5_2_16:28995606-28996332:+|nuORF	ENST00000569969.5_2_16:28995606-28996332:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7912475466728	2	499.78711	997.559667	4.4079	0.002203	2.1433	0.0010712	6.5512	0.0032742	499.78763438046616	87.321	0.37054	88.413	88.241	88.612	1.0918					23	11	3	0	0	0	0.71526	1	36878	36878		6.7232	0.96273	1	2836800			33215	7385	16345	16411	38533	38533					0.06078948311221666
SWRKFHVLL	9	Unmodified	_SWRKFHVLL_					0	0	0		chr14:94062621-94065779|133|19.53|0.06|8.3|-|1|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|61;L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|274|3|anti-sense	chr14:94062621-94065779|133|19.53|0.06|8.3|-|1|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|61	chr14:94062621-94065779|133|19.53|0.06|8.3|-|1|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|61	MSMS	GG20161007_CRH_Patient100_A02_01	1	593.3514892458916	2	593.3482	1184.68185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.921	1	35.921	35.421	36.421	0								0	0	0	0.42693	1	15060	15060		1.8442	0	1				33216	205	16346	16412	38534	38534					0.09689410113469421
SWSLGVLLYI	10	Unmodified	_SWSLGVLLYI_					0	0	0		NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant;ENSG00000163545|ENST00000367157|NUAK2	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8280517458916	2	575.828975	1149.6434	1.9065	0.0010978	-0.9358	-0.00053886	0.97071	0.00055897	575.8282548948549	81.615	0.35577	81.615	81.469	81.824	0					17	11	2	0	0	0	0.78468	1	33996	33996		13.906	0	1	423400			33217	3698	16347	16413	38535	38535					0.074560596882975
SWSLGVLLYI	10	Unmodified	_SWSLGVLLYI_					0	0	0		NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant;ENSG00000163545|ENST00000367157|NUAK2	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8314086794853	2	575.828975	1149.6434	2.5779	0.0014844	2.345	0.0013503	4.9229	0.0028347	575.8303696213261	80.048	0.49824	81.3	81.109	81.608	1.2512					40	15	4	0	0	0	0.17319	2	33609	33609;33664		52.268	6.5687	1	3845700			33218	3698	16347	16413	38536;38537	38536					0.074560596882975
SWSLGVLLYI	10	Unmodified	_SWSLGVLLYI_					0	0	0		NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant;ENSG00000163545|ENST00000367157|NUAK2	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	NUAK2|p.I548Lfs*12|1|0.11|ENSG00000163545|chr1:205303695-205303696|-/CCCAGCTACTAGGGAGGCTGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8306152224541	2	575.828975	1149.6434	1.6066	0.00092512	1.9917	0.0011469	3.5982	0.002072	575.830095140626	79.524	0.42879	81.241	81.015	81.444	1.7167					35	13	4	0	0	0	0.17319	1	33344	33344		52.268	6.5687	1	3529700			33219	3698	16347	16413	38538	38538					0.074560596882975
SWSLTWAEL	9	Unmodified	_SWSLTWAEL_					0	0	0			REV__ENST00000229795.7_2_6:36078312-36078393:+|nuORF	REV__ENST00000229795.7_2_6:36078312-36078393:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7726928591728	2	546.771657	1091.52876	2.1228	0.0011607	0.05085	2.7803E-05	2.1737	0.0011885	546.7716338399553	78.828	0.40182	80.563	80.382	80.784	1.735					40	12	4	0	0	0	0.24063	1	33087	33087		28.487	8.0332	1	7643300	+		33220	12099	16348	16414	38539	38539					-0.013342497936719155
SWSMLLGV	8	Unmodified	_SWSMLLGV_					0	0	0		nc|ENSG00000198715|Q8WWB7-2|GLMP;ENSG00000198715|ENST00000362007|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	892.4644653201103	1	892.459701	891.452425	2.7716	0.0024736	0.70173	0.00062627	3.4734	0.0030999	892.4606331972674	75.01	0.34256	76.317	76.15	76.493	1.3063					14	10	2	0	0	0	0.62161	1	31479	31479		38.151	4.0487	1	1590200			33221	5071	16349	16415	38540	38540					0.0023565510537082446
SWSMLLGV	8	Unmodified	_SWSMLLGV_					0	0	0		nc|ENSG00000198715|Q8WWB7-2|GLMP;ENSG00000198715|ENST00000362007|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	892.459701	891.452425	1.7505	0.0015623	0.59663	0.00053247	2.3471	0.0020947	892.4612840505222	76.498	0.21994	76.498	76.403	76.623	0	0.11316	-0.00049121	NaN	38.151	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	405350			33222	5071	16349	16415							0.0023565510537082446
SWSMLLGV	8	Unmodified	_SWSMLLGV_					0	0	0		nc|ENSG00000198715|Q8WWB7-2|GLMP;ENSG00000198715|ENST00000362007|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	nc|ENSG00000198715|Q8WWB7-2|GLMP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	892.459701	891.452425	2.7514	0.0024555	3.1854	0.0028428	5.9368	0.0052984	892.4617486347232	74.559	0.3526	76.34	76.067	76.42	1.7817	-0.044639	0.0018191	NaN	38.151	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1168200			33223	5071	16349	16415							0.0023565510537082446
SWTFLIPE	8	Unmodified	_SWTFLIPE_					0	0	0		ENSG00000157423|ENST00000393567|HYDIN;nc|ENSG00000157423|Q4G0P3-2|HYDIN;ENST00000378856.8_2_16:70845233-70899022:-|nuORF	ENSG00000157423|ENST00000393567|HYDIN	ENSG00000157423|ENST00000393567|HYDIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	992.5126220583916	1	992.50876	991.501483	3.3149	0.00329	0.59985	0.00059536	3.9147	0.0038854	992.5092464547238	74.933	0.27897	76.715	76.543	76.822	1.7817					13	8	2	0	0	0	0.68174	1	31441	31441		32.117	3.6301	1	1210000			33224	3471	16350	16416	38541	38541					0.005392666659531642
SWVQDRSF	8	Unmodified	_SWVQDRSF_					0	0	0			REV__ENST00000590311.5_1_17:67109267-67109498:-|nuORF	REV__ENST00000590311.5_1_17:67109267-67109498:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7480956912041	2	512.745973	1023.47739	2.0888	0.001071	3.5997	0.0018457	5.6884	0.0029167	512.7476467370267	68.603	0.49764	70.456	70.12	70.617	1.853					45	15	5	0	0	0	0.87276	1	28783	28783		13.508	0.97634	1	10813000	+		33225	10467	16351	16417	38542	38542					-0.033405737677071556
SWWNVYNYNSQ	11	Unmodified	_SWWNVYNYNSQ_					0	0	0			REV__ENSG00000157315|ENST00000288025|TMED6	REV__ENSG00000157315|ENST00000288025|TMED6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	730.8170654177666	2	730.815116	1459.61568	0.59839	0.00043731	0.46884	0.00034263	1.0672	0.00077995	730.8156486476134	10.334	0.89595	10.334	9.7227	10.619	0					41	28	2	0	0	0	0.93654	1	4239	4239		7.609	4.6137	1	719680	+		33226	10536	16352	16418	38543	38543					-0.09574495309902886
SYADAFQFL	9	Unmodified	_SYADAFQFL_					0	0	0		ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2508422732353	2	531.250557	1060.48656	2.7663	0.0014696	-0.18447	-9.7998E-05	2.5818	0.0013716	531.250973430841	79.614	0.68591	80.865	80.331	81.017	1.2512					35	21	3	0	0	0	0.083604	1	33401	33401		54.774	26.287	1	3126600			33227	5346	16353	16419	38544	38544					-0.04126225202048772
SYADAFQFL	9	Unmodified	_SYADAFQFL_					0	0	0		ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1061.498339831829	1	1061.49384	1060.48656	3.3706	0.0035779	-1.1918	-0.0012651	2.1788	0.0023128	1061.4930547672577	79.632	0.30891	80.883	80.739	81.048	1.2512					16	9	2	0	0	0	0.059546	1	33415	33415		64.236	33.6	1	1931300			33228	5346	16353	16419	38545	38545					-0.04126225202048772
SYADAFQFL	9	Unmodified	_SYADAFQFL_					0	0	0		ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1061.492358386517	1	1061.49384	1060.48656	2.565	0.0027227	-1.7236	-0.0018296	0.84143	0.00089317	1061.4905536556098	79.107	0.27969	80.842	80.753	81.033	1.735					18	8	3	0	0	0	0.029093	1	33193	33193		88.904	45.045	1	1805800			33229	5346	16353	16419	38546	38546					-0.04126225202048772
SYADAFQFL	9	Unmodified	_SYADAFQFL_					0	0	0		ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	ENSG00000242732|ENST00000609883|RTL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2505370974541	2	531.250557	1060.48656	2.1797	0.001158	0.059079	3.1386E-05	2.2388	0.0011894	531.250843280259	79.034	0.71345	80.769	80.35	81.064	1.735					37	22	3	0	0	0	0.11478	1	33203	33203		44.407	23.953	1	3315400			33230	5346	16353	16419	38547	38547					-0.04126225202048772
SYADNILSF	9	Unmodified	_SYADNILSF_					0	0	0		WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant;ENSG00000120008|ENST00000263461|WDR11	WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant	WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.2556640505791	2	515.248015	1028.48148	2.5952	0.0013372	1.5598	0.00080368	4.155	0.0021409	515.2483186088883	68.072	0.27804	69.942	69.827	70.105	1.87					15	8	3	0	0	0	0.040553	1	28551	28551		52.268	8.4101	1	2008100			33231	2094	16354	16420	38548	38548					-0.03162529064661612
SYADNILSF	9	Unmodified	_SYADNILSF_					0	0	0		WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant;ENSG00000120008|ENST00000263461|WDR11	WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant	WDR11|p.T355Nfs*14|1|0.32|ENSG00000120008|chr10:120866632-120866633|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	515.248015	1028.48148	2.4221	0.001248	5.9478	0.0030646	8.3699	0.0043126	515.2506984815354	68.577	0.24355	69.943	69.816	70.06	1.3657	0.00031752	0.0021384	NaN	52.268	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2311700			33232	2094	16354	16420							-0.03162529064661612
SYADQMFLL	9	Oxidation (M)	_SYADQM(Oxidation (M))FLL_		SYADQM(1)FLL		SYADQM(63)FLL	0	0	1		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2596923708916	2	552.257525	1102.5005	2.7787	0.0015345	0.42938	0.00023713	3.2081	0.0017717	552.2577462969992	62.886	0.89072	64.299	64.045	64.936	1.4134					77	28	4	0	0	0	0.063746	2	26329	26329;26378		62.573	34.399	1	7608200			33233	1315	16355	16421	38549;38550	38549		23			-0.04665315765282685
SYADQMFLL	9	Oxidation (M)	_SYADQM(Oxidation (M))FLL_		SYADQM(1)FLL		SYADQM(68)FLL	0	0	1		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2587158083916	2	552.257525	1102.5005	2.877	0.0015889	1.1673	0.00064464	4.0443	0.0022335	552.2584450539965	62.458	0.82638	64.41	64.086	64.913	1.9526					69	26	4	0	0	0	0.049839	1	26109	26109		68.081	39.594	1	6121000			33234	1315	16355	16421	38551	38551		23			-0.04665315765282685
SYADQMFLL	9	Unmodified	_SYADQMFLL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.2621337771416	2	544.260068	1086.50558	2.7184	0.0014795	0.26447	0.00014394	2.9829	0.0016235	544.2605189742812	79.002	0.68732	80.269	80.003	80.691	1.2668					80	21	6	0	0	0	0.037761	5	33189	33108;33150;33189;33228;33273		78.149	47.513	1	67177000			33235	1315	16355	16422	38552;38553;38554;38555;38556	38554					-0.034210119026511165
SYADQMFLL	9	Unmodified	_SYADQMFLL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1087.516040027142	1	1087.51286	1086.50558	2.569	0.0027938	0.034607	3.7636E-05	2.6036	0.0028314	1087.512966165958	79.035	0.50188	80.301	80.034	80.536	1.2668					46	15	4	0	0	0	0.01454	4	33164	33122;33164;33202;33247		103.75	65.774	1	18270000			33236	1315	16355	16422	38557;38558;38559;38560	38558					-0.034210119026511165
SYADQMFLL	9	Unmodified	_SYADQMFLL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.2610961794853	2	544.260068	1086.50558	2.3307	0.0012685	0.41575	0.00022628	2.7464	0.0014948	544.2606064373356	78.538	0.68245	80.273	79.978	80.66	1.735					83	21	6	0	0	0	0.037761	5	32927	32879;32927;32966;33005;33045		78.149	51.266	1	127450000			33237	1315	16355	16422	38561;38562;38563;38564;38565	38562					-0.034210119026511165
SYADQMFLL	9	Unmodified	_SYADQMFLL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1087.514697253704	1	1087.51286	1086.50558	2.5399	0.0027622	-0.67768	-0.00073698	1.8622	0.0020252	1087.5123824003226	78.569	0.46716	80.304	80.07	80.537	1.735					46	14	4	0	0	0	0.01454	4	32955	32908;32955;32992;33037		103.75	65.774	1	17422000			33238	1315	16355	16422	38566;38567;38568;38569	38567					-0.034210119026511165
SYAKIPTLI	9	Unmodified	_SYAKIPTLI_					0	0	0			REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.8069640994072	2	503.302593	1004.59063	1.8598	0.00093605	4.441	0.0022351	6.3008	0.0031712	503.80584467459215	48.246	0.25332	49.634	49.49	49.743	1.388					10	7	2	0	0	0	0.5697	1	20165	20165		12.532	0	1	786440	+		33239	8554	16356	16423	38570	38570					0.08852101625473097
SYAKIPTLI	9	Unmodified	_SYAKIPTLI_					0	0	0			REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	REV__nc|ENSG00000020577|Q9UPU9-2|SAMD4A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	503.302593	1004.59063	1.8598	0.00093605	4.441	0.0022351	6.3008	0.0031712	503.80584467459215	48.246	0.25332	49.634	49.49	49.743	1.388	0	0	NaN	12.532	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	786440	+		33240	8554	16356	16423							0.08852101625473097
SYANVKQWL	9	Unmodified	_SYANVKQWL_					0	0	0		nc|ENSG00000233111|Q92928|RAB1C;ENSG00000174903|ENST00000311481|RAB1B	nc|ENSG00000233111|Q92928|RAB1C	nc|ENSG00000233111|Q92928|RAB1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7930175662041	2	554.792924	1107.57129	1.8729	0.0010391	-1.3303	-0.00073804	0.54265	0.00030106	554.7917021094994	45.672	0.50364	47.047	46.768	47.271	1.3751					32	15	3	0	0	0	0.0070725	2	19160	19110;19160		114.2	65.856	1	4213700			33241	4345	16357	16424	38571;38572	38572					0.021811453345662812
SYANVKQWL	9	Unmodified	_SYANVKQWL_					0	0	0		nc|ENSG00000233111|Q92928|RAB1C;ENSG00000174903|ENST00000311481|RAB1B	nc|ENSG00000233111|Q92928|RAB1C	nc|ENSG00000233111|Q92928|RAB1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7936889529228	2	554.792924	1107.57129	1.6498	0.00091529	-0.19083	-0.00010587	1.459	0.00080942	554.7919540205717	45.171	0.43594	47.13	46.863	47.299	1.9596					25	13	2	0	0	0	0.0070725	2	18944	18894;18944		114.2	68.58	1	4839100			33242	4345	16357	16424	38573;38574	38574					0.021811453345662812
SYANYFIRL	9	Unmodified	_SYANYFIRL_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8026000857353	2	573.800749	1145.58694	2.9392	0.0016865	0.36821	0.00021128	3.3074	0.0018978	573.800568183416	61.551	0.43157	62.968	62.714	63.145	1.4177					24	13	2	0	0	0	0.031377	2	25823	25772;25823		85.272	56.785	1	3846500			33243	1238	16358	16425	38575;38576	38576					0.01997431851600595
SYANYFIRL	9	Unmodified	_SYANYFIRL_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8010742068291	2	573.800749	1145.58694	2.7224	0.0015621	0.15748	9.0364E-05	2.8799	0.0016525	573.8003718765414	60.979	0.42736	62.944	62.729	63.157	1.9653					24	13	2	0	0	0	0.019432	2	25610	25565;25610		99.799	61.623	1	3737700			33244	1238	16358	16425	38577;38578	38578					0.01997431851600595
SYAPFMVGAV	10	Unmodified	_SYAPFMVGAV_					0	0	0			REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2592040896416	2	521.257328	1040.5001	2.2985	0.0011981	-0.17774	-9.2646E-05	2.1208	0.0011055	521.2576416506781	78.538	0.18603	80.273	80.133	80.319	1.735					8	5	2	0	0	0	0.85124	1	32948	32948		6.7232	1.4925	1	1341200	+		33245	14885	16359	16426	38579	38579					-0.018526906944543953
SYAPFMVGAV	10	Unmodified	_SYAPFMVGAV_					0	0	0			REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	521.257328	1040.5001	2.9477	0.0015365	-1.3399	-0.00069845	1.6078	0.00083807	521.2570179670012	78.995	0.21608	80.262	80.161	80.378	1.2668	-0.0054919	-0.00059113	NaN	6.7232	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	416280	+		33246	14885	16359	16426							-0.018526906944543953
SYAPFMVGAV	10	Unmodified	_SYAPFMVGAV_					0	0	0			REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	REV__tr|A0A553SJ62|A0A553SJ62_NIACISDRfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_16190PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	521.257328	1040.5001	2.2985	0.0011981	-0.17774	-9.2646E-05	2.1208	0.0011055	521.2576416506781	78.538	0.18603	80.273	80.133	80.319	1.735	0.0054919	0.00062047	NaN	6.7232	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1341200	+		33247	14885	16359	16426							-0.018526906944543953
SYAYILEAF	9	Unmodified	_SYAYILEAF_					0	0	0		SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant;ENSG00000155465|ENST00000674313|SLC7A7;ENSG00000103064|ENST00000219343|SLC7A6	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7722656130791	2	538.768583	1075.52261	3.3223	0.00179	1.6199	0.00087276	4.9422	0.0026627	538.7695895445278	82.751	0.43746	83.963	83.698	84.136	1.2125					33	13	3	0	0	0	0.069258	2	34681	34681;34725		60.39	31.903	1	6958500			33248	1416	16360	16427	38580;38581	38580					-0.012127680251978745
SYAYILEAF	9	Unmodified	_SYAYILEAF_					0	0	0		SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant;ENSG00000155465|ENST00000674313|SLC7A7;ENSG00000103064|ENST00000219343|SLC7A6	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1076.532397449017	1	1076.52989	1075.52261	3.3261	0.0035806	-0.013029	-1.4026E-05	3.313	0.0035666	1076.5285796905819	82.704	0.4053	83.917	83.731	84.136	1.2125					28	12	3	0	0	0	0.031324	2	34689	34689;34743		85.357	51.254	1	4582800			33249	1416	16360	16427	38582;38583	38582					-0.012127680251978745
SYAYILEAF	9	Unmodified	_SYAYILEAF_					0	0	0		SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant;ENSG00000155465|ENST00000674313|SLC7A7;ENSG00000103064|ENST00000219343|SLC7A6	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1076.534472644329	1	1076.52989	1075.52261	3.6423	0.003921	1.473	0.0015858	5.1153	0.0055068	1076.5301579327804	82.238	0.34683	83.908	83.734	84.081	1.67					17	10	2	0	0	0	0.03795	2	34516	34465;34516		77.984	28.273	1	4710300			33250	1416	16360	16427	38584;38585	38585					-0.012127680251978745
SYAYILEAF	9	Unmodified	_SYAYILEAF_					0	0	0		SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant;ENSG00000155465|ENST00000674313|SLC7A7;ENSG00000103064|ENST00000219343|SLC7A6	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	SLC7A7|p.S266Ifs*29|1|0.04|ENSG00000155465|chr14:22776293-22776294|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7708007693291	2	538.768583	1075.52261	3.4818	0.0018759	1.0788	0.0005812	4.5605	0.0024571	538.769015561582	82.207	0.43883	83.877	83.734	84.173	1.67					26	13	3	0	0	0	0.069258	2	34467	34467;34520		60.39	31.903	1	5225700			33251	1416	16360	16427	38586;38587	38586					-0.012127680251978745
SYDAKREDF	9	Unmodified	_SYDAKREDF_					0	0	0		PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant;ENSG00000197563|ENST00000640252|PIGN	PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	PIGN|p.M265Ifs*37|1|0.21|ENSG00000197563|chr18:62146980-62146981|TC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7594482302666	2	565.759278	1129.504	4.7063	0.0026626	-1.5321	-0.00086681	3.1742	0.0017958	565.7578668982052	89.132	0.44228	90.537	90.264	90.707	1.4045					45	13	5	0	0	0	0.51189	1	37522	37522		14.838	1.3304	1	3199000			33252	8053	16361	16428	38588	38588					-0.05556929667068289
SYDPLRIYLF	10	Unmodified	_SYDPLRIYLF_					0	0	0		ENST00000480929.1_1_2:219612227-219612548:+|nuORF;ENST00000465558.5_1_2:219610891-219612857:+|nuORF;ENSG00000135912|ENST00000392102|TTLL4	ENST00000480929.1_1_2:219612227-219612548:+|nuORF	ENST00000480929.1_1_2:219612227-219612548:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.8442260622978	2	643.842613	1285.67067	2.2398	0.0014421	1.3029	0.00083884	3.5426	0.0022809	643.8428874001954	80.158	0.46762	81.41	81.14	81.608	1.2512					42	14	4	0	0	0	0.091617	2	33649	33599;33649		65.474	47.327	1	5556000			33253	2691	16362	16429	38589;38590	38590					0.039265432286583746
SYDPLRIYLF	10	Unmodified	_SYDPLRIYLF_					0	0	0		ENST00000480929.1_1_2:219612227-219612548:+|nuORF;ENST00000465558.5_1_2:219610891-219612857:+|nuORF;ENSG00000135912|ENST00000392102|TTLL4	ENST00000480929.1_1_2:219612227-219612548:+|nuORF	ENST00000480929.1_1_2:219612227-219612548:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.8436767458916	2	643.842613	1285.67067	1.3593	0.00087517	0.73283	0.00047183	2.0921	0.001347	643.8430302586823	79.621	0.43091	81.338	81.137	81.568	1.7167					35	13	3	0	0	0	0.10428	2	33411	33362;33411		63.227	41.481	1	4637700			33254	2691	16362	16429	38591;38592	38592					0.039265432286583746
SYDPLYAVF	9	Unmodified	_SYDPLYAVF_					0	0	0		TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant;nc|ENSG00000213996|Q9BZW4-2|TM6SF2;TM6SF2|p.Y352Lfs*23|1|0.03|ENSG00000213996|chr19:19264744-19264745|-/AGTTCTGGAAG|frameshift_variant;ENSG00000213996|ENST00000389363|TM6SF2	TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant	TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7602416872978	2	537.760758	1073.50696	2.8008	0.0015062	-4.2108	-0.0022644	-1.4099	-0.0007582	537.7584858124667	80.583	0.30267	81.834	81.698	82.001	1.2512					15	9	2	0	0	0	0.34572	1	33835	33835		23.148	5.0134	1	1362700			33255	5234	16363	16430	38593	38593					-0.02685054542234866
SYDPLYAVF	9	Unmodified	_SYDPLYAVF_					0	0	0		TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant;nc|ENSG00000213996|Q9BZW4-2|TM6SF2;TM6SF2|p.Y352Lfs*23|1|0.03|ENSG00000213996|chr19:19264744-19264745|-/AGTTCTGGAAG|frameshift_variant;ENSG00000213996|ENST00000389363|TM6SF2	TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant	TM6SF2|p.T106Afs*46|1|0.07|ENSG00000213996|chr19:19270258-19270259|-/GC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.760758	1073.50696	1.2513	0.0006729	-4.3907	-0.0023612	-3.1394	-0.0016883	537.7584160622398	80.199	0.2988	81.916	81.726	82.025	1.7167	0.040717	-0.00014126	NaN	23.148	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836930			33256	5234	16363	16430							-0.02685054542234866
SYELRYFQI	9	Unmodified	_SYELRYFQI_					0	0	0		ENST00000480427.1_1_12:125420028-125420310:-|nuORF;ENSG00000116251|ENST00000234875|RPL22	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.8121826052666	2	609.811313	1217.60807	3.1873	0.0019437	-0.67142	-0.00040944	2.5159	0.0015342	609.8103634494405	60.689	0.34799	62.108	61.933	62.281	1.4196					24	10	3	0	0	0	0.043696	1	25464	25464		72.968	32.729	1	1676900			33257	1962	16364	16431	38594	38594					0.007973971604542385
SYELRYFQI	9	Unmodified	_SYELRYFQI_					0	0	0		ENST00000480427.1_1_12:125420028-125420310:-|nuORF;ENSG00000116251|ENST00000234875|RPL22	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	ENST00000480427.1_1_12:125420028-125420310:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	609.811313	1217.60807	3.1532	0.0019229	0.090408	5.5132E-05	3.2437	0.001978	609.8112124853438	60.155	0.31513	62.12	61.977	62.292	1.9653	0.0061111	0.00066268	NaN	72.968	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1752800			33258	1962	16364	16431							0.007973971604542385
SYFPKILTF	9	Unmodified	_SYFPKILTF_					0	0	0		nc|ENSG00000138821|Q9C0K1-2|SLC39A8;nc|ENSG00000138821|Q9C0K1-3|SLC39A8;ENSG00000138821|ENST00000356736|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3119994997978	2	558.310418	1114.60628	3.4837	0.001945	0.74882	0.00041807	4.2325	0.0023631	558.3107812166529	72.849	0.53182	74.179	73.943	74.474	1.3297					54	16	5	0	0	0	0.066197	3	30594	30545;30594;30651		61.602	36.203	1	8530900			33259	2858	16365	16432	38595;38596;38597	38596					0.05356388142513424
SYFPKILTF	9	Unmodified	_SYFPKILTF_					0	0	0		nc|ENSG00000138821|Q9C0K1-2|SLC39A8;nc|ENSG00000138821|Q9C0K1-3|SLC39A8;ENSG00000138821|ENST00000356736|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3118774294853	2	558.310418	1114.60628	2.6641	0.0014874	0.86075	0.00048056	3.5249	0.001968	558.3106639718042	72.342	0.46344	74.152	73.921	74.385	1.8101					37	14	3	0	0	0	0.12216	3	30359	30312;30359;30428		41.956	16.556	1	6765000			33260	2858	16365	16432	38598;38599;38600	38599					0.05356388142513424
SYGDILHVI	9	Unmodified	_SYGDILHVI_					0	0	0		ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-3|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;ENSG00000082458|ENST00000374360|DLG3	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7762634158134	2	508.7742	1015.53385	3.4412	0.0017508	0.21151	0.00010761	3.6527	0.0018584	508.774426272214	61.248	0.61269	62.666	62.407	63.02	1.4178					59	19	5	0	0	0	0.051699	4	25613	25613;25662;25701;25741		67.344	37.119	1	88142000			33261	1031	16366	16433	38601;38602;38603;38604	38601					0.02670054068948957
SYGDILHVI	9	Unmodified	_SYGDILHVI_					0	0	0		ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-3|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;ENSG00000082458|ENST00000374360|DLG3	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1016.546679675579	1	1016.54112	1015.53385	2.4618	0.0025025	1.4655	0.0014898	3.9273	0.0039922	1016.5426868455755	61.228	0.15057	62.647	62.565	62.715	1.4192					6	4	2	0	0	0	0.017484	1	25698	25698		67.344	22.937	1	1018200			33262	1031	16366	16433	38605	38605					0.02670054068948957
SYGDILHVI	9	Unmodified	_SYGDILHVI_					0	0	0		ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-3|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;ENSG00000082458|ENST00000374360|DLG3	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7760497927666	2	508.7742	1015.53385	3.3943	0.001727	0.23163	0.00011785	3.626	0.0018448	508.77452421035264	60.702	0.58589	62.667	62.387	62.973	1.9653					60	18	5	0	0	0	0.03795	4	25440	25396;25440;25479;25531		77.984	51.101	1	64924000			33263	1031	16366	16433	38606;38607;38608;38609	38607					0.02670054068948957
SYGDILHVI	9	Unmodified	_SYGDILHVI_					0	0	0		ENST00000466140.5_1_X:69698992-69715274:+|nuORF;nc|ENSG00000082458|Q92796-3|DLG3;nc|ENSG00000082458|Q92796-2|DLG3;ENSG00000082458|ENST00000374360|DLG3	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	ENST00000466140.5_1_X:69698992-69715274:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1016.54112	1015.53385	3.057	0.0031075	-1.9646	-0.0019971	1.0923	0.0011104	1016.5369587105357	60.737	0.18359	62.703	62.577	62.76	1.9653	0.027912	-0.0026717	NaN	67.344	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	563490			33264	1031	16366	16433							0.02670054068948957
SYGFHPYY	8	Unmodified	_SYGFHPYY_					0	0	0		ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	ENSG00000090402|ENST00000264382|SI	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.1520873904228	3	345.151987	1032.43413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.597	1	34.897	34.397	35.397	0.29942								0	0	0	1.0178	1	14531	14531		0.45834	0	1				33265	1138	16367	16434	38610	38610					-0.08078763544995127
SYGIIRGLQF	10	Unmodified	_SYGIIRGLQF_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3259155154228	2	577.321848	1152.62914	2.9775	0.001719	3.3774	0.0019499	6.3549	0.0036688	577.3241472578484	61.232	0.30151	62.651	62.504	62.805	1.4189					22	9	3	0	0	0	0.45795	2	25673	25673;25724		29.841	16.885	1	1801400			33266	4323	16368	16435	38611;38612	38611					0.05893407259986816
SYGIIRGLQF	10	Unmodified	_SYGIIRGLQF_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3239013552666	2	577.321848	1152.62914	3.2005	0.0018477	2.325	0.0013423	5.5255	0.00319	577.3232724129773	60.686	0.30832	62.651	62.482	62.79	1.9653					16	9	2	0	0	0	0.18015	1	25449	25449		51.415	33.269	1	1200100			33267	4323	16368	16435	38613	38613					0.05893407259986816
SYGKINILL	9	Unmodified	_SYGKINILL_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8093444705009	2	510.808042	1019.60153	2.0548	0.0010496	0.52585	0.00026861	2.5806	0.0013182	510.80823032407375	54.286	0.60055	55.691	55.459	56.06	1.4048					49	18	4	0	0	0	0.026734	4	22713	22665;22713;22750;22795		92.653	23.548	1	16605000			33268	1775	16369	16436	38614;38615;38616;38617	38615					0.09251503999746546
SYGKINILL	9	Unmodified	_SYGKINILL_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8084289431572	2	510.808042	1019.60153	1.4417	0.00073642	-0.11433	-5.8403E-05	1.3273	0.00067802	510.80795279394727	53.766	0.62589	55.735	55.503	56.128	1.9697					42	19	4	0	0	0	0.040497	3	22527	22481;22527;22567		75.761	14.827	1	16634000			33269	1775	16369	16436	38618;38619;38620	38619					0.09251503999746546
SYGSVFKAI	9	Unmodified	_SYGSVFKAI_					0	0	0		ENSG00000104375|ENST00000419617|STK3;STK3-NIPAL2|4|fusion;nc|ENSG00000104375|Q13188-2|STK3;STK3-NIPAL2|6|fusion;STK3-NIPAL2|5|fusion;STK3-NIPAL2|1|fusion;STK3-NIPAL2|3|fusion;STK3-NIPAL2|2|fusion	ENSG00000104375|ENST00000419617|STK3	ENSG00000104375|ENST00000419617|STK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2636596560478	2	486.263468	970.512382	1.9414	0.00094405	-2.4215	-0.0011775	-0.4801	-0.00023345	486.26177633625656	42.393	0.99909	43.733	43.171	44.17	1.3399					61	31	4	0	0	0	0.04812	2	17741	17741;17780		69.105	36.799	1	4332400			33270	1460	16370	16437	38621;38622	38621					0.025946690402406603
SYGSVFKAI	9	Unmodified	_SYGSVFKAI_					0	0	0		ENSG00000104375|ENST00000419617|STK3;STK3-NIPAL2|4|fusion;nc|ENSG00000104375|Q13188-2|STK3;STK3-NIPAL2|6|fusion;STK3-NIPAL2|5|fusion;STK3-NIPAL2|1|fusion;STK3-NIPAL2|3|fusion;STK3-NIPAL2|2|fusion	ENSG00000104375|ENST00000419617|STK3	ENSG00000104375|ENST00000419617|STK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.2638732790947	2	486.263468	970.512382	1.7316	0.00084203	-1.7575	-0.00085462	-0.025879	-1.2584E-05	486.26211342186804	41.835	0.90469	43.728	43.325	44.229	1.8927					50	28	4	0	0	0	0.04812	2	17505	17505;17544		69.105	40.023	1	5275900			33271	1460	16370	16437	38623;38624	38623					0.025946690402406603
SYHGYYMV	8	Unmodified	_SYHGYYMV_					0	0	0			REV__nc|ENSG00000141524|Q7Z403-4|TMC6	REV__nc|ENSG00000141524|Q7Z403-4|TMC6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	509.8058654665947	2	510.218203	1018.42185	2.5622	0.0013073	-2.5207	-0.0012861	0.041403	2.1125E-05	510.21663976995575	68.368	0.30544	69.746	69.523	69.828	1.3778					15	9	2	0	0	0	2.3239	1	28598	28598		10.183	2.2732	1	620900	+		33272	10154	16371	16438	38625	38625					-0.08662123279691514
SYIALPLTL	9	Unmodified	_SYIALPLTL_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000573635.1_1_16:16381587-16388153:+|nuORF;ENST00000566823.1_1_16:14982940-14989499:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	990.5902587771416	1	990.58701	989.579734	6.471	0.0064101	-3.1894	-0.0031594	3.2817	0.0032508	990.5836617992578	87.819	0.31813	88.91	88.734	89.052	1.0918					22	9	3	0	0	0	0.0075027	2	37064	37014;37064		112.59	38.17	1	3787800			33273	1422	16372	16439	38626;38627	38627					0.0845269925117691
SYIALPLTL	9	Unmodified	_SYIALPLTL_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000573635.1_1_16:16381587-16388153:+|nuORF;ENST00000566823.1_1_16:14982940-14989499:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.8005554080009	2	495.797143	989.579734	4.9897	0.0024739	0.38421	0.00019049	5.3739	0.0026644	495.7981275207958	87.85	0.41386	88.941	88.734	89.148	1.0918					23	12	3	0	0	0	0.083604	1	37027	37027		54.774	20.671	1	3281200			33274	1422	16372	16439	38628	38628					0.0845269925117691
SYIALPLTL	9	Unmodified	_SYIALPLTL_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000573635.1_1_16:16381587-16388153:+|nuORF;ENST00000566823.1_1_16:14982940-14989499:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.5818969607353	1	990.58701	989.579734	5.1992	0.0051502	-0.30155	-0.00029871	4.8976	0.0048515	990.5873216653689	87.387	0.28101	88.883	88.734	89.015	1.4953					14	8	2	0	0	0	0.018723	2	36823	36823;36872		100.37	36.135	1	2626900			33275	1422	16372	16439	38629;38630	38629					0.0845269925117691
SYIALPLTL	9	Unmodified	_SYIALPLTL_					0	0	0		nc|ENSG00000185164|Q5JPE7-3|NOMO2;ENSG00000185164|ENST00000622306|NOMO2;ENSG00000103512|ENST00000287667|NOMO1;ENSG00000103226|ENST00000399336|NOMO3;nc|ENSG00000185164|Q5JPE7|NOMO2;ENST00000573635.1_1_16:16381587-16388153:+|nuORF;ENST00000566823.1_1_16:14982940-14989499:+|nuORF	nc|ENSG00000185164|Q5JPE7-3|NOMO2	nc|ENSG00000185164|Q5JPE7-3|NOMO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7997924685478	2	495.797143	989.579734	4.6489	0.0023049	0.37384	0.00018535	5.0227	0.0024903	495.7979242672449	87.439	0.40693	88.934	88.703	89.11	1.4953					26	12	3	0	0	0	0.031324	1	36869	36869		85.357	34.502	1	2974700			33276	1422	16372	16439	38631	38631					0.0845269925117691
SYIDLLQRF	9	Unmodified	_SYIDLLQRF_					0	0	0		ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.8165161013603	2	577.813856	1153.61316	2.4237	0.0014004	0.94976	0.00054879	3.3735	0.0019492	577.8146070929245	72.299	0.49111	73.628	73.391	73.883	1.3297					36	15	3	0	0	0	0.007852	2	30314	30314;30360		111.29	73.313	1	3814700			33277	2340	16373	16440	38632;38633	38632					0.04249701023104535
SYIDLLQRF	9	Unmodified	_SYIDLLQRF_					0	0	0		ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	ENSG00000127580|ENST00000293883|WDR24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.8156616091728	2	577.813856	1153.61316	2.4177	0.001397	0.20931	0.00012094	2.627	0.0015179	577.8142283724661	71.83	0.36996	73.653	73.445	73.815	1.8239					28	11	3	0	0	0	0.037098	2	30116	30116;30165		78.728	51.844	1	2942900			33278	2340	16373	16440	38634;38635	38634					0.04249701023104535
SYIDRLISVF	10	Unmodified	_SYIDRLISVF_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8364135622978	2	606.834788	1211.65502	3.121	0.0018939	1.4065	0.00085354	4.5275	0.0027474	606.8354860353676	81.19	0.36965	82.423	82.225	82.595	1.2332					31	11	3	0	0	0	0.094699	2	34050	34050;34116		64.927	28.421	1	5178200			33279	4935	16374	16441	38636;38637	38636					0.05766256711604001
SYIDRLISVF	10	Unmodified	_SYIDRLISVF_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.8368408083916	2	606.834788	1211.65502	2.2124	0.0013426	1.3604	0.00082553	3.5728	0.0021681	606.8358893766683	80.771	0.36845	82.467	82.272	82.64	1.6959					27	11	3	0	0	0	0.057855	2	33906	33857;33906		75.571	39.064	1	5156300			33280	4935	16374	16441	38638;38639	38639					0.05766256711604001
SYIDVAVKL	9	Unmodified	_SYIDVAVKL_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2938415408134	2	504.292225	1006.5699	1.8357	0.00092574	1.3559	0.00068379	3.1917	0.0016095	504.2929676510225	54.172	0.70927	55.576	55.35	56.06	1.4048					58	22	4	0	0	0	0.0080158	5	22660	22611;22660;22699;22738;22799		110.67	39.021	1	10657000			33281	1088	16375	16442	38640;38641;38642;38643;38644	38641					0.06687511245809219
SYIDVAVKL	9	Unmodified	_SYIDVAVKL_					0	0	0		ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	ENSG00000087301|ENST00000281741|TXNDC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2933532595634	2	504.292225	1006.5699	0.83774	0.00042247	1.0257	0.00051728	1.8635	0.00093974	504.29277042263357	53.66	0.58877	55.63	55.414	56.003	1.9697					48	18	4	0	0	0	0.0080158	4	22478	22434;22478;22530;22585		110.67	38.821	1	10571000			33282	1088	16375	16442	38645;38646;38647;38648	38646					0.06687511245809219
SYIEDFAKF	9	Unmodified	_SYIEDFAKF_					0	0	0		ENST00000463718.5_1_12:21428225-21457481:-|nuORF;nc|ENSG00000084453|P46721-2|SLCO1A2;ENSG00000084453|ENST00000683939|SLCO1A2	ENST00000463718.5_1_12:21428225-21457481:-|nuORF	ENST00000463718.5_1_12:21428225-21457481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2720214724541	2	560.27149	1118.52843	1.3595	0.00076171	-1.0914	-0.0006115	0.26811	0.00015021	560.2715409710637	58.613	0.28767	60.031	59.909	60.196	1.4181					14	8	2	0	0	0	0.1109	1	24589	24589		45.7	23.953	1	2405800			33283	1050	16376	16443	38649	38649					-0.02609669513526569
SYIEDFAKF	9	Unmodified	_SYIEDFAKF_					0	0	0		ENST00000463718.5_1_12:21428225-21457481:-|nuORF;nc|ENSG00000084453|P46721-2|SLCO1A2;ENSG00000084453|ENST00000683939|SLCO1A2	ENST00000463718.5_1_12:21428225-21457481:-|nuORF	ENST00000463718.5_1_12:21428225-21457481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2729980349541	2	560.27149	1118.52843	0.99077	0.0005551	-0.72322	-0.0004052	0.26755	0.0001499	560.2716207322698	58.099	0.31502	60.068	59.931	60.247	1.969					16	9	2	0	0	0	0.1109	1	24357	24357		45.7	26.443	1	3297200			33284	1050	16376	16443	38650	38650					-0.02609669513526569
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7935058474541	2	575.792589	1149.57063	1.7543	0.0010101	-0.86235	-0.00049653	0.89195	0.00051358	575.7931889571826	67.206	1.285	68.595	68.279	69.564	1.3888					157	41	5	0	0	0	0.00090036	11	28354	28099;28145;28184;28236;28275;28314;28354;28408;28459;28511;28568		133.7	63.37	1	610800000			33285	3643	16377	16444	38651;38652;38653;38654;38655;38656;38657;38658;38659;38660;38661	38657					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1150.580004870892	1	1150.5779	1149.57063	1.4362	0.0016525	-0.54304	-0.00062481	0.89317	0.0010277	1150.5773853164278	67.152	0.29742	68.541	68.438	68.735	1.3888					20	9	3	0	0	0	0.029093	2	28169	28169;28231		88.904	44.497	1	2581300			33286	3643	16377	16444	38662;38663	38662					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.7953979372978	2	575.792589	1149.57063	2.1181	0.0012196	0.34178	0.0001968	2.4599	0.0014164	575.7938486562904	68.494	0.96101	69.86	69.512	70.473	1.3666					77	30	4	0	0	0	0.037761	2	28618	28618;28772		78.149	42.105	1	7079200			33287	3643	16377	16444	38664;38665	38664					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7930786013603	2	575.792589	1149.57063	1.4605	0.00084093	-0.89731	-0.00051667	0.56315	0.00032426	575.7930287197161	66.713	1.1678	68.602	68.309	69.477	1.8889					151	37	6	0	0	0	0.00090036	10	27936	27894;27936;27987;28039;28078;28117;28160;28213;28266;28317		133.7	58.848	1	636630000			33288	3643	16377	16444	38666;38667;38668;38669;38670;38671;38672;38673;38674;38675	38667					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1150.582446277142	1	1150.5779	1149.57063	1.1684	0.0013443	-1.0241	-0.0011783	0.14428	0.000166	1150.578365613459	66.713	0.26586	68.602	68.467	68.733	1.8889					16	8	2	0	0	0	0.031377	1	27969	27969		85.272	46.657	1	2017600			33289	3643	16377	16444	38676	38676					0.0018230589485028759
SYIEHIFEI	9	Unmodified	_SYIEHIFEI_					0	0	0		ENSG00000162734|ENST00000360472|PEA15;nc|ENSG00000162734|Q15121-2|PEA15	ENSG00000162734|ENST00000360472|PEA15	ENSG00000162734|ENST00000360472|PEA15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7946044802666	2	575.792589	1149.57063	2.1651	0.0012467	-0.5012	-0.00028859	1.6639	0.00095808	576.2934796818037	67.944	1.0858	69.814	69.458	70.544	1.87					82	34	4	0	0	0	0.037761	1	28370	28370		78.149	44.704	1	6000700			33290	3643	16377	16444	38677	38677					0.0018230589485028759
SYIEKGLFKF	10	Unmodified	_SYIEKGLFKF_					0	0	0		ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.3408691287041	2	616.339707	1230.66486	1.4749	0.00090903	1.7979	0.0011081	3.2728	0.0020171	616.3408332547688	49.141	0.25179	50.532	50.391	50.643	1.3911					12	7	2	0	0	0	0.18015	1	20570	20570		51.415	34.302	1	1263200			33291	4712	16378	16445	38678	38678					0.058754447169803825
SYIEKGLFKF	10	Unmodified	_SYIEKGLFKF_					0	0	0		ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	ENSG00000184860|ENST00000328945|SDR42E1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	616.339707	1230.66486	1.7941	0.0011058	1.399	0.00086227	3.1932	0.0019681	616.3410323380903	48.611	0.24686	50.588	50.422	50.669	1.9772	0.027941	-0.00037657	NaN	51.415	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	805870			33292	4712	16378	16445							0.058754447169803825
SYILRLEEI	9	Unmodified	_SYILRLEEI_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.2066528201103	2	568.321514	1134.62847	2.2256	0.0012648	-2.3689	-0.0013463	-0.14339	-8.1493E-05	568.3198540689143	59.043	0.29688	60.463	60.32	60.617	1.4196					16	9	2	0	0	0	0.066352	1	24750	24750		43.982	14.141	1	1660600			33293	3464	16379	16446	38679	38679					0.06654567820282864
SYILTHFIF	9	Unmodified	_SYILTHFIF_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8047363162041	2	570.808042	1139.60153	0.5434	0.00031018	-3.9942	-0.0022799	-3.4508	-0.0019697	570.8059345067378	57.886	0.29621	59.304	59.165	59.462	1.4181					28	18	2	0	0	0	0.083604	2	24258	24258;24304		54.774	10.915	1	8506300			33294	2472	16380	16447	38680;38681	38680					0.03731503999733832
SYINLRLSL	9	Unmodified	_SYINLRLSL_					0	0	0			REV__ENST00000430687.1_3_22:37962101-37962158:+|nuORF	REV__ENST00000430687.1_3_22:37962101-37962158:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3124877810478	2	539.816399	1077.61824	2.6334	0.0014215	-1.8721	-0.0010106	0.76123	0.00041092	539.8161264720868	61.593	0.78631	63.55	63.305	64.091	1.9571					55	24	3	0	0	0	0.44535	1	25981	25981		18.135	3.2967	1	3188200	+		33295	13023	16381	16448	38682	38682					0.0825400488570267
SYIPLFPQL	9	Unmodified	_SYIPLFPQL_					0	0	0		ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3055908083916	2	539.302593	1076.59063	5.3179	0.002868	-0.22699	-0.00012242	5.091	0.0027456	539.3023222510805	89.519	0.59639	90.539	90.235	90.831	1.0199					58	18	5	0	0	0	0.031377	4	37738	37644;37689;37738;37794		85.272	0	1	18625000			33296	3875	16382	16449	38683;38684;38685;38686	38685					0.0554010162547911
SYIPLFPQL	9	Unmodified	_SYIPLFPQL_					0	0	0		ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1077.603808581829	1	1077.59791	1076.59063	5.3051	0.0057168	0.42169	0.00045441	5.7268	0.0061712	1077.5983734993092	89.553	0.46837	90.573	90.3	90.769	1.0199					31	14	3	0	0	0	0.01454	3	37727	37680;37727;37782		103.75	0	1	7940400			33297	3875	16382	16449	38687;38688;38689	38688					0.0554010162547911
SYIPLFPQL	9	Unmodified	_SYIPLFPQL_					0	0	0		ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3050414919853	2	539.302593	1076.59063	4.7903	0.0025834	0.057531	3.1027E-05	4.8479	0.0026145	539.3024983837475	89.13	0.62948	90.535	90.137	90.766	1.4045					59	19	4	0	0	0	0.04145	4	37505	37466;37505;37556;37612		74.929	0	1	15956000			33298	3875	16382	16449	38690;38691;38692;38693	38691					0.0554010162547911
SYIPLFPQL	9	Unmodified	_SYIPLFPQL_					0	0	0		ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	ENSG00000165996|ENST00000361271|HACD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1077.605151355267	1	1077.59791	1076.59063	4.9778	0.0053641	1.1216	0.0012087	6.0994	0.0065727	1077.6007400645278	89.124	0.38029	90.528	90.296	90.677	1.4045					26	11	4	0	0	0	0.023786	3	37529	37482;37529;37570		96.285	0	1	5586600			33299	3875	16382	16449	38694;38695;38696	38695					0.0554010162547911
SYIRPEDIVNF	11	Unmodified	_SYIRPEDIVNF_					0	0	0		ENST00000463015.1_1_1:202977868-202984294:+|nuORF;nc|ENSG00000163444|Q8IXX5-2|TMEM183A;nc|ENSG00000224831|Q1AE95|TMEM183BP;ENSG00000163444|ENST00000367242|TMEM183A	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	676.8463622927666	2	676.845884	1351.67722	1.4627	0.00099	-0.63881	-0.00043238	0.82385	0.00055762	676.8454618057766	58.852	0.37254	60.272	60.036	60.409	1.4196					27	11	3	0	0	0	0.11286	2	24689	24641;24689		53.47	25.841	1	4218000			33300	3683	16383	16450	38697;38698	38698					0.015444363893493573
SYIRPEDIVNF	11	Unmodified	_SYIRPEDIVNF_					0	0	0		ENST00000463015.1_1_1:202977868-202984294:+|nuORF;nc|ENSG00000163444|Q8IXX5-2|TMEM183A;nc|ENSG00000224831|Q1AE95|TMEM183BP;ENSG00000163444|ENST00000367242|TMEM183A	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	676.8477661013603	2	676.845884	1351.67722	1.1008	0.00074508	0.018516	1.2532E-05	1.1193	0.00075761	676.8456982671079	58.383	0.33817	60.352	60.148	60.487	1.969					26	10	3	0	0	0	0.11286	2	24460	24460;24515		53.47	24.975	1	4170700			33301	3683	16383	16450	38699;38700	38699					0.015444363893493573
SYIWDNVYE	9	Unmodified	_SYIWDNVYE_					0	0	0		tr|A0A553ST19|A0A553ST19_NIACInon-reducingendalpha-L-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_04240PE=3SV=1	tr|A0A553ST19|A0A553ST19_NIACInon-reducingendalpha-L-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_04240PE=3SV=1	tr|A0A553ST19|A0A553ST19_NIACInon-reducingendalpha-L-arabinofuranosidaseOS=NialliacirculansOX=1397GN=CEQ21_04240PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.7628051638603	2	594.764029	1187.5135	1.8632	0.0011082	0.49096	0.00029201	2.3542	0.0014002	594.7631026104843	67.182	0.36061	68.571	68.407	68.768	1.3888					24	11	3	0	0	0	0.42097	1	28178	28178		10.074	0	1	2030600			33302	16634	16384	16451	38701	38701					-0.072751613814944
SYKNGFLNL	9	Unmodified	_SYKNGFLNL_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.2805053591728	2	528.279649	1054.54475	2.2723	0.0012004	0.21494	0.00011355	2.4872	0.001314	528.279675961198	47.254	0.48007	48.636	48.378	48.858	1.3825					36	14	3	0	0	0	0.00020031	4	19767	19722;19767;19806;19845		142.08	64.095	1	10995000			33303	2474	16385	16452	38702;38703;38704;38705	38703					0.0196545644323578
SYKNGFLNL	9	Unmodified	_SYKNGFLNL_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2810546755791	2	528.279649	1054.54475	2.1083	0.0011138	0.16496	8.7147E-05	2.2733	0.0012009	528.2796381025688	46.756	0.48761	48.732	48.447	48.934	1.976					38	15	3	0	0	0	4.34E-05	4	19562	19512;19562;19599;19643		155.03	77.042	1	8633500			33304	2474	16385	16452	38706;38707;38708;38709	38707					0.0196545644323578
SYLDEGFLL	9	Unmodified	_SYLDEGFLL_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1056.528613269329	1	1056.5248	1055.51753	3.6167	0.0038211	-3.0346	-0.0032061	0.58211	0.00061502	1056.5223656312053	81.254	0.34032	82.487	82.255	82.595	1.2332					14	10	2	0	0	0	0.076627	1	34092	34092		57.471	21.427	1	1776300			33305	3888	16386	16453	38710	38710					-0.00801071887804028
SYLDEGFLL	9	Unmodified	_SYLDEGFLL_					0	0	0		nc|ENSG00000166226|P78371-2|CCT2;ENSG00000166226|ENST00000299300|CCT2	nc|ENSG00000166226|P78371-2|CCT2	nc|ENSG00000166226|P78371-2|CCT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1056.528369128704	1	1056.5248	1055.51753	3.0802	0.0032543	-1.0957	-0.0011576	1.9845	0.0020966	1056.5230378915337	80.806	0.36964	82.502	82.333	82.703	1.6959					24	11	3	0	0	0	0.09539	1	33922	33922		50.855	14.811	1	1472300			33306	3888	16386	16453	38711	38711					-0.00801071887804028
SYLDNFIKI	9	Unmodified	_SYLDNFIKI_					0	0	0		nc|ENSG00000130669|O96013-2|PAK4;nc|ENSG00000130669|O96013-3|PAK4;nc|ENSG00000130669|O96013-4|PAK4;ENSG00000130669|ENST00000360442|PAK4	nc|ENSG00000130669|O96013-2|PAK4	nc|ENSG00000130669|O96013-2|PAK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8048583865166	2	556.802957	1111.59136	2.9787	0.0016585	0.63277	0.00035233	3.6114	0.0020109	556.8033152702482	70.823	0.40828	72.176	71.937	72.345	1.3536					31	12	3	0	0	0	0.010279	2	29733	29690;29733		107.19	61.166	1	10029000			33307	2448	16387	16454	38712;38713	38713					0.040028962745282115
SYLDNFIKI	9	Unmodified	_SYLDNFIKI_					0	0	0		nc|ENSG00000130669|O96013-2|PAK4;nc|ENSG00000130669|O96013-3|PAK4;nc|ENSG00000130669|O96013-4|PAK4;ENSG00000130669|ENST00000360442|PAK4	nc|ENSG00000130669|O96013-2|PAK4	nc|ENSG00000130669|O96013-2|PAK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8035766482353	2	556.802957	1111.59136	1.7896	0.00099643	-0.11369	-6.3303E-05	1.6759	0.00093313	556.8029199335175	70.345	0.40213	72.183	71.946	72.349	1.8378					36	12	4	0	0	0	0.026734	3	29497	29454;29497;29554		92.653	52.696	1	10019000			33308	2448	16387	16454	38714;38715;38716	38715					0.040028962745282115
SYLDQVKLQF	10	Unmodified	_SYLDQVKLQF_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.8336059451103	2	620.832246	1239.64994	1.9775	0.0012277	0.40906	0.00025396	2.3866	0.0014817	620.8323642015831	63.552	0.39533	64.965	64.785	65.18	1.4134					37	12	4	0	0	0	2.3609E-08	2	26678	26630;26678		205.91	148.19	1	9128400			33309	4086	16388	16455	38717;38718	38718					0.039699528490018565
SYLDQVKLQF	10	Unmodified	_SYLDQVKLQF_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.8334838747978	2	620.832246	1239.64994	1.8397	0.0011421	0.11969	7.4306E-05	1.9594	0.0012164	620.8321746282061	63.038	0.4316	64.983	64.752	65.183	1.9444					38	13	4	0	0	0	3.4159000000000005E-30	2	26456	26411;26456		250.47	174.7	1	8588200			33310	4086	16388	16455	38719;38720	38720					0.039699528490018565
SYLDSIHFF	9	Unmodified	_SYLDSIHFF_					0	0	0		nc|ENSG00000005339|Q92793-2|CREBBP;ENSG00000005339|ENST00000262367|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7736083865166	2	564.771657	1127.52876	3.5613	0.0020113	-0.66775	-0.00037712	2.8935	0.0016342	564.7712681625258	73.612	0.40928	74.93	74.685	75.094	1.318					40	12	4	0	0	0	0.069258	3	30878	30834;30878;30933		60.39	25.988	1	4727300			33311	487	16389	16456	38721;38722;38723	38722					-0.029902497936518557
SYLDSIHFF	9	Unmodified	_SYLDSIHFF_					0	0	0		nc|ENSG00000005339|Q92793-2|CREBBP;ENSG00000005339|ENST00000262367|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	nc|ENSG00000005339|Q92793-2|CREBBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7727538943291	2	564.771657	1127.52876	2.6295	0.0014851	-0.053906	-3.0445E-05	2.5756	0.0014546	564.7713545807338	73.099	0.41109	74.909	74.703	75.114	1.8101					36	12	4	0	0	0	0.069258	2	30682	30630;30682		60.39	27.604	1	5002200			33312	487	16389	16456	38724;38725	38725					-0.029902497936518557
SYLDSVHFF	9	Unmodified	_SYLDSVHFF_					0	0	0		ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7648803591728	2	557.763832	1113.51311	1.8056	0.0010071	-0.89459	-0.00049897	0.91099	0.00050812	557.7633575618044	66.882	0.49953	68.271	68.027	68.526	1.3888					47	15	4	0	0	0	0.03795	2	28070	28021;28070		77.984	35.89	1	4393300			33313	1271	16390	16457	38726;38727	38727					-0.03910536310718271
SYLDSVHFF	9	Unmodified	_SYLDSVHFF_					0	0	0		ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	ENSG00000100393|ENST00000263253|EP300	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7653686404228	2	557.763832	1113.51311	1.5738	0.00087781	-0.61723	-0.00034427	0.95658	0.00053355	557.7638133400351	66.44	0.46905	68.329	68.088	68.557	1.8889					41	14	4	0	0	0	0.12174	1	27846	27846		42.095	23.948	1	4075500			33314	1271	16390	16457	38728	38728					-0.03910536310718271
SYLEAGADICF	11	Unmodified	_SYLEAGADICF_					0	0	0		tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.8467895388603	3	396.846235	1187.51688	1.3136	0.00052131	0.97658	0.00038755	2.2902	0.00090886	396.84646207846845	67.21	0.83524	68.599	68.121	68.957	1.3888					37	26	2	0	0	0	0.37492	2	28202	28154;28202		17.049	3.6122	1	4707300			33315	17262	16391	16458	38729;38730	38730					-0.06938234599169846
SYLEAGADICF	11	Unmodified	_SYLEAGADICF_					0	0	0		tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	tr|A0A7D7A2S3|A0A7D7A2S3_9CLOTIsocitratelyase/phosphoenolpyruvatemutasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.8469726443291	3	396.846235	1187.51688	1.2976	0.00051494	0.05482	2.1755E-05	1.3524	0.00053669	396.8462844245822	66.656	0.67419	68.545	68.404	69.078	1.8889					41	21	3	0	0	0	0.58697	2	27955	27955;28004		12.856	0	1	5062900			33316	17262	16391	16458	38731;38732	38731					-0.06938234599169846
SYLEGAVYI	9	Unmodified	_SYLEGAVYI_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1014.51719969511	1	1014.51424	1013.50696	2.4526	0.0024882	1.3347	0.0013541	3.7873	0.0038423	1014.5144813768384	61.335	0.58153	62.752	62.594	63.176	1.4177					41	18	4	0	0	0	0.070055	3	25711	25711;25758;25828		67.344	20.63	1	4906200			33317	2648	16392	16459	38733;38734;38735	38733					0.0007494545775443839
SYLEGAVYI	9	Unmodified	_SYLEGAVYI_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21;ENST00000549689.5_1_12:117612134-117624310:-|nuORF	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1014.515917956829	1	1014.51424	1013.50696	2.8161	0.002857	-0.17879	-0.00018138	2.6373	0.0026756	1014.5140335330245	60.84	0.46061	62.805	62.637	63.097	1.9653					32	14	3	0	0	0	0.093059	3	25512	25512;25560;25616		67.344	29.193	1	4347300			33318	2648	16392	16459	38736;38737;38738	38736					0.0007494545775443839
SYLEKQVVTF	10	Unmodified	_SYLEKQVVTF_					0	0	0		ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3277465701103	2	607.326796	1212.63904	1.9999	0.0012146	0.18638	0.00011319	2.1863	0.0013278	607.3267877092849	43.771	0.30683	45.124	44.947	45.254	1.3536					23	9	3	0	0	0	0.067026	2	18332	18332;18384		71.708	38.922	1	2799300			33319	606	16393	16460	38739;38740	38739					0.04122550474698983
SYLEKQVVTF	10	Unmodified	_SYLEKQVVTF_					0	0	0		ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	ENSG00000018699|ENST00000317907|TTC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.3282348513603	2	607.326796	1212.63904	1.9672	0.0011947	0.49895	0.00030303	2.4661	0.0014977	607.326663232574	43.145	0.30169	45.089	44.923	45.225	1.9438					24	9	3	0	0	0	0.10428	2	18069	18069;18118		63.227	36.959	1	2890900			33320	606	16393	16460	38741;38742	38741					0.04122550474698983
SYLELVKSL	9	Unmodified	_SYLELVKSL_					0	0	0		nc|ENSG00000143252|Q99643-5|SDHC;nc|ENSG00000143252|Q99643-3|SDHC;ENSG00000143252|ENST00000367975|SDHC	nc|ENSG00000143252|Q99643-5|SDHC	nc|ENSG00000143252|Q99643-5|SDHC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3080322146416	2	526.305332	1050.59611	2.9474	0.0015512	0.86971	0.00045773	3.8171	0.002009	526.3057716196425	62.54	0.45095	63.954	63.711	64.162	1.4134					25	14	2	0	0	0	0.0070725	2	26211	26211;26267		114.2	50.479	1	8487300			33321	3020	16394	16461	38743;38744	38743					0.07283780417287744
SYLELVKSL	9	Unmodified	_SYLELVKSL_					0	0	0		nc|ENSG00000143252|Q99643-5|SDHC;nc|ENSG00000143252|Q99643-3|SDHC;ENSG00000143252|ENST00000367975|SDHC	nc|ENSG00000143252|Q99643-5|SDHC	nc|ENSG00000143252|Q99643-5|SDHC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3068725466728	2	526.305332	1050.59611	2.9632	0.0015595	0.98731	0.00051963	3.9505	0.0020792	526.3058690786056	61.967	0.37175	63.924	63.719	64.091	1.9571					21	11	2	0	0	0	0.014947	2	26028	25977;26028		103.42	35.339	1	7354400			33322	3020	16394	16461	38745;38746	38746					0.07283780417287744
SYLERHGLINF	11	Unmodified	_SYLERHGLINF_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A;ENST00000481879.1_1_1:23376923-23381674:+|nuORF	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	674.8514282107353	2	674.854044	1347.69353	1.8202	0.0012284	-3.9777	-0.0026844	-2.1575	-0.001456	674.8512463661898	43.854	0.27441	45.208	45.01	45.284	1.3536					20	8	3	0	0	0	0.12236	2	18360	18360;18409		51.765	39.524	1	2257000			33323	471	16395	16462	38747;38748	38747					0.033595623461451396
SYLERHGLINF	11	Unmodified	_SYLERHGLINF_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A;ENST00000481879.1_1_1:23376923-23381674:+|nuORF	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2405273318291	3	450.238455	1347.69353	2.2827	0.0010278	1.438	0.00064745	3.7207	0.0016752	450.23954454169433	43.825	0.42935	45.178	44.978	45.408	1.3536					24	13	2	0	0	0	0.65349	1	18380	18380		20.411	12.124	1	6489500			33324	471	16395	16462	38749	38749					0.033595623461451396
SYLERHGLINF	11	Unmodified	_SYLERHGLINF_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A;ENST00000481879.1_1_1:23376923-23381674:+|nuORF	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	674.8562499880791	2	674.854044	1347.69353	1.6142	0.0010894	0.33811	0.00022817	1.9523	0.0013175	674.8543551727068	43.188	0.27285	45.132	44.952	45.225	1.9438					18	8	3	0	0	0	0.12236	1	18082	18082		51.765	39.524	1	1351100			33325	471	16395	16462	38750	38750					0.033595623461451396
SYLERHGLINF	11	Unmodified	_SYLERHGLINF_					0	0	0		ENSG00000004487|ENST00000400181|KDM1A;nc|ENSG00000004487|O60341|KDM1A;ENST00000481879.1_1_1:23376923-23381674:+|nuORF	ENSG00000004487|ENST00000400181|KDM1A	ENSG00000004487|ENST00000400181|KDM1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2398254275322	3	450.238455	1347.69353	2.1484	0.00096729	0.32984	0.00014851	2.4782	0.0011158	450.2387309873765	43.174	0.33141	45.118	44.923	45.255	1.9438					20	10	2	0	0	0	0.54387	1	18091	18091		14.825	12.39	1	5272600			33326	471	16395	16462	38751	38751					0.033595623461451396
SYLEVLLKL	9	Unmodified	_SYLEVLLKL_					0	0	0		nc|ENSG00000143870|Q15084-3|PDIA6;ENSG00000143870|ENST00000272227|PDIA6;nc|ENSG00000143870|Q15084-4|PDIA6;nc|ENSG00000143870|Q15084-5|PDIA6;nc|ENSG00000143870|Q15084-2|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3343383669853	2	539.33135	1076.64815	1.6296	0.00087891	0.061903	3.3386E-05	1.6915	0.0009123	539.33223322869	83.717	0.50468	84.905	84.61	85.115	1.1879					31	15	4	0	0	0	0.029061	1	35134	35134		88.954	39.021	1	2636400			33327	3055	16396	16463	38752	38752					0.11288943831027609
SYLEVLLKL	9	Unmodified	_SYLEVLLKL_					0	0	0		nc|ENSG00000143870|Q15084-3|PDIA6;ENSG00000143870|ENST00000272227|PDIA6;nc|ENSG00000143870|Q15084-4|PDIA6;nc|ENSG00000143870|Q15084-5|PDIA6;nc|ENSG00000143870|Q15084-2|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	nc|ENSG00000143870|Q15084-3|PDIA6	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3330566287041	2	539.33135	1076.64815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.167	1	84.804	84.304	85.304	1.6379								0	0	0	0.026209	1	34886	34886		75.761	37.787	1				33328	3055	16396	16463	38753	38753					0.11288943831027609
SYLHLRRF	8	Unmodified	_SYLHLRRF_					0	0	0			REV__ENST00000513825.1_1_5:14601096-14602296:+|nuORF	REV__ENST00000513825.1_1_5:14601096-14602296:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.7510864138603	2	546.309075	1090.6036	2.0438	0.0011166	2.8459	0.0015547	4.8897	0.0026713	546.3103452314357	68.313	0.33637	69.69	69.523	69.859	1.3778					17	10	2	0	0	0	2.3239	1	28647	28647		10.183	0	1	1468500	+		33329	10275	16397	16464	38754	38754					0.0619197752821492
SYLKEFIHI	9	Unmodified	_SYLKEFIHI_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10;ENST00000556748.5_1_14:58666901-58681958:+|nuORF;ENST00000556312.5_1_14:58666935-58675849:+|nuORF	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8204223513603	2	575.318774	1148.623	0.74948	0.00043119	-1.2088	-0.00069545	-0.45933	-0.00026426	575.3178953864793	51.595	0.52586	52.992	52.683	53.209	1.3966					32	17	2	0	0	0	0.056421	3	21590	21528;21590;21635		65.474	36.392	1	4088100			33330	2509	16398	16465	38755;38756;38757	38756					0.054628890284675435
SYLKEFIHI	9	Unmodified	_SYLKEFIHI_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10;ENST00000556748.5_1_14:58666901-58681958:+|nuORF;ENST00000556312.5_1_14:58666935-58675849:+|nuORF	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3185302615166	2	575.318774	1148.623	-0.18237	-0.00010492	-0.30159	-0.00017351	-0.48396	-0.00027843	575.8203095121117	50.97	0.55452	52.945	52.636	53.191	1.9753					32	19	2	0	0	0	0.075994	3	21331	21281;21331;21410		57.722	28.64	1	3227100			33331	2509	16398	16465	38758;38759;38760	38759					0.054628890284675435
SYLKQLPHF	9	Unmodified	_SYLKQLPHF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	378.5627624392509	3	378.209836	1131.60768	1.4939	0.00056501	-2.7488	-0.0010396	-1.2549	-0.00047462	378.21003274800114	40.014	0.60852	41.324	40.938	41.547	1.3102					39	19	3	0	0	0	0.051726	1	16770	16770		49.554	22.466	1	3189400			33332	3062	16399	16466	38761	38761					0.04714022231269155
SYLKQLPHF	9	Unmodified	_SYLKQLPHF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	378.5625793337822	3	378.209836	1131.60768	1.3909	0.00052604	-2.7758	-0.0010498	-1.3849	-0.00052379	378.2099951318458	39.584	1.0177	41.447	41.001	42.019	1.8624					60	32	3	0	0	0	0.029768	1	16651	16651		51.63	16.018	1	3491700			33333	3062	16399	16466	38762	38762					0.04714022231269155
SYLMQMKLL	9	Unmodified	_SYLMQMKLL_					0	0	0		tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8035766482353	2	563.803588	1125.59262	1.0204	0.0005753	-0.81481	-0.0004594	0.20557	0.0001159	563.8036373592181	21.12	0.29245	22.245	22.132	22.424	1.1254					19	9	3	0	0	0	0.75101	2	8792	8792;8845		4.756	2.6963	1	1315600			33334	16341	16400	16467	38763;38764	38763					0.034850710474302105
SYLMQMKLL	9	Unmodified	_SYLMQMKLL_					0	0	0		tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	tr|A0A553SLL9|A0A553SLL9_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	376.2045776247978	3	376.204818	1125.59262	0.15428	5.8041E-05	-1.2407	-0.00046674	-1.0864	-0.0004087	376.204236620251	20.7	0.28964	22.274	22.119	22.409	1.5748					21	9	4	0	0	0	0.33297	1	8598	8598		23.79	6.3471	1	1464700			33335	16341	16400	16467	38765	38765					0.034850710474302105
SYLNSFFQL	9	Unmodified	_SYLNSFFQL_					0	0	0		ENSG00000165424|ENST00000372336|ZCCHC24	ENSG00000165424|ENST00000372336|ZCCHC24	ENSG00000165424|ENST00000372336|ZCCHC24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.7822753787041	2	559.779482	1117.54441	5.3151	0.0029753	0.0013481	7.5464E-07	5.3165	0.002976	559.7793787431572	88.059	0.38177	89.116	88.89	89.272	1.0562					37	11	4	0	0	0	0.031377	2	37144	37098;37144		85.272	45.315	1	4551900			33336	3837	16401	16468	38766;38767	38767					-0.009659632766215509
SYLNSFFQL	9	Unmodified	_SYLNSFFQL_					0	0	0		ENSG00000165424|ENST00000372336|ZCCHC24	ENSG00000165424|ENST00000372336|ZCCHC24	ENSG00000165424|ENST00000372336|ZCCHC24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.7815429568291	2	559.779482	1117.54441	4.6463	0.0026009	0.65646	0.00036748	5.3028	0.0029684	559.7801674696009	87.631	0.38156	89.126	88.951	89.333	1.4953					27	11	3	0	0	0	0.031377	2	36960	36908;36960		85.272	45.315	1	4952400			33337	3837	16401	16468	38768;38769	38769					-0.009659632766215509
SYLPAFKVF	9	Unmodified	_SYLPAFKVF_					0	0	0		nc|ENSG00000163754|P46976-2|GYG1;ENSG00000163754|ENST00000345003|GYG1	nc|ENSG00000163754|P46976-2|GYG1	nc|ENSG00000163754|P46976-2|GYG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3011352419853	2	536.29731	1070.58007	2.3176	0.0012429	3.7658	0.0020196	6.0834	0.0032625	536.301310003026	68.29	0.43391	69.668	69.394	69.828	1.3778					31	13	3	0	0	0	0.22154	1	28630	28630		30.637	13.694	1	2849500			33338	3721	16402	16469	38770	38770					0.04760118971034899
SYLPAFKVF	9	Unmodified	_SYLPAFKVF_					0	0	0		nc|ENSG00000163754|P46976-2|GYG1;ENSG00000163754|ENST00000345003|GYG1	nc|ENSG00000163754|P46976-2|GYG1	nc|ENSG00000163754|P46976-2|GYG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2997314333916	2	536.29731	1070.58007	1.9644	0.0010535	1.1511	0.00061731	3.1155	0.0016708	536.3003368921028	67.677	0.46752	69.547	69.299	69.767	1.87					40	14	4	0	0	0	0.22154	1	28373	28373		30.637	16.73	1	3451500			33339	3721	16402	16469	38771	38771					0.04760118971034899
SYLPFTEAF	9	Unmodified	_SYLPFTEAF_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON;chr1:25805275-25812687|86|38.58|0.12|8.34|+|0|SELENON,SELENON|1	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7623168826103	2	537.760758	1073.50696	2.8581	0.001537	-0.41439	-0.00022284	2.4437	0.0013141	537.7606037798453	79.659	0.43198	80.91	80.739	81.171	1.2512					39	13	4	0	0	0	0.037761	2	33451	33404;33451		78.149	44.047	1	8476400			33340	3620	16403	16470	38772;38773	38773					-0.026850545422576033
SYLPFTEAF	9	Unmodified	_SYLPFTEAF_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON;chr1:25805275-25812687|86|38.58|0.12|8.34|+|0|SELENON,SELENON|1	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1074.518481433392	1	1074.51424	1073.50696	2.9384	0.0031574	0.17818	0.00019145	3.1166	0.0033488	1074.514701868285	79.689	0.4023	80.94	80.707	81.109	1.2512					34	12	4	0	0	0	4.1345E-05	2	33428	33428;33479		156.16	95.766	1	9677500			33341	3620	16403	16470	38774;38775	38774					-0.026850545422576033
SYLPFTEAF	9	Unmodified	_SYLPFTEAF_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON;chr1:25805275-25812687|86|38.58|0.12|8.34|+|0|SELENON,SELENON|1	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1074.516528308392	1	1074.51424	1073.50696	2.2041	0.0023683	-0.036233	-3.8933E-05	2.1679	0.0023294	1074.5137226176864	79.22	0.40215	80.955	80.691	81.093	1.735					35	12	4	0	0	0	7.2896E-05	2	33230	33177;33230		147.83	80.487	1	7709900			33342	3620	16403	16470	38776;38777	38777					-0.026850545422576033
SYLPFTEAF	9	Unmodified	_SYLPFTEAF_					0	0	0		ENSG00000162430|ENST00000361547|SELENON;nc|ENSG00000162430|Q9NZV5-2|SELENON;chr1:25805275-25812687|86|38.58|0.12|8.34|+|0|SELENON,SELENON|1	ENSG00000162430|ENST00000361547|SELENON	ENSG00000162430|ENST00000361547|SELENON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7616454958916	2	537.760758	1073.50696	2.0079	0.0010798	-0.42915	-0.00023078	1.5787	0.00084897	537.7606511711908	79.187	0.46356	80.922	80.722	81.185	1.735					33	14	3	0	0	0	0.12174	3	33231	33180;33231;33287		42.095	12.09	1	7064500			33343	3620	16403	16470	38778;38779;38780	38779					-0.026850545422576033
SYLQQNGVQNY	11	Unmodified	_SYLQQNGVQNY_					0	0	0		ENSG00000166266|ENST00000393094|CUL5	ENSG00000166266|ENST00000393094|CUL5	ENSG00000166266|ENST00000393094|CUL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	438.8776122927666	3	438.542203	1312.60478	1.8351	0.00080476	1.9612	0.00086007	3.7963	0.0016648	438.54293838961024	42.429	0.21902	44.35	44.227	44.446	1.9211					11	6	2	0	0	0	1.0365	1	17807	17807		1.2148	0.20126	1	909690			33344	3891	16404	16471	38781	38781					-0.039018976841816766
SYLQYLEYL	9	Unmodified	_SYLQYLEYL_					0	0	0		nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;ENSG00000100462|ENST00000324366|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.3034545779228	2	596.300247	1190.58594	4.9916	0.0029765	0.57441	0.00034252	5.566	0.003319	596.2998548633324	89.826	0.58955	90.846	90.493	91.083	1.0199					40	18	4	0	0	0	0.037761	3	37844	37801;37844;37888		78.149	40.175	1	5402700			33345	1282	16405	16472	38782;38783;38784	38783					-0.001728273079606879
SYLQYLEYL	9	Unmodified	_SYLQYLEYL_					0	0	0		nc|ENSG00000100462|O14744-4|PRMT5;nc|ENSG00000100462|O14744-3|PRMT5;nc|ENSG00000100462|O14744-5|PRMT5;nc|ENSG00000100462|O14744-2|PRMT5;ENSG00000100462|ENST00000324366|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	nc|ENSG00000100462|O14744-4|PRMT5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.3021728396416	2	596.300247	1190.58594	4.6617	0.0027798	-0.14885	-8.876E-05	4.5129	0.002691	596.2997809847427	89.34	0.33994	90.744	90.583	90.923	1.4045					27	10	3	0	0	0	0.0066739	2	37627	37627;37681		115.69	81.29	1	3694800			33346	1282	16405	16472	38785;38786	38785					-0.001728273079606879
SYLRQLELF	9	Unmodified	_SYLRQLELF_					0	0	0		ENST00000344823.9_1_16:3451289-3451709:+|nuORF	ENST00000344823.9_1_16:3451289-3451709:+|nuORF	ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8237792849541	2	584.821681	1167.62881	2.3446	0.0013712	1.1366	0.00066473	3.4812	0.0020359	584.8218922109568	63.974	0.32283	65.381	65.174	65.497	1.4071					21	9	3	0	0	0	0.24056	1	26813	26813		28.495	12.345	1	1639100			33347	5959	16406	16473	38787	38787					0.05169987540125476
SYLRQLELF	9	Unmodified	_SYLRQLELF_					0	0	0		ENST00000344823.9_1_16:3451289-3451709:+|nuORF	ENST00000344823.9_1_16:3451289-3451709:+|nuORF	ENST00000344823.9_1_16:3451289-3451709:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.8249999880791	2	584.821681	1167.62881	2.4223	0.0014166	0.15493	9.0609E-05	2.5772	0.0015072	584.8213922882255	63.385	0.32007	65.329	65.121	65.441	1.9444					15	9	2	0	0	0	0.20909	1	26602	26602		32.037	13.891	1	1009400			33348	5959	16406	16473	38788	38788					0.05169987540125476
SYLSIIEQI	9	Unmodified	_SYLSIIEQI_					0	0	0		tr|A0A553SG46|A0A553SG46_NIACIAromaticacidexporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10160PE=4SV=1	tr|A0A553SG46|A0A553SG46_NIACIAromaticacidexporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10160PE=4SV=1	tr|A0A553SG46|A0A553SG46_NIACIAromaticacidexporterfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10160PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2975341677666	2	533.294965	1064.57538	4.9329	0.0026307	-0.77149	-0.00041143	4.1614	0.0022193	533.294704020376	88.772	0.35204	90.219	90.05	90.402	1.4467					19	10	2	0	0	0	0.059546	1	37414	37414		64.236	0	1	1917200			33349	16095	16407	16474	38789	38789					0.04567190037596447
SYLSSILRF	9	Unmodified	_SYLSSILRF_					0	0	0		ENSG00000175115|ENST00000320580|PACS1;ENST00000529795.1_1_11:66001292-66002875:+|nuORF;nc|ENSG00000175115|Q6VY07-2|PACS1	ENSG00000175115|ENST00000320580|PACS1	ENSG00000175115|ENST00000320580|PACS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3059570193291	2	543.303124	1084.5917	3.3788	0.0018357	2.7399	0.0014886	6.1187	0.0033243	543.3040943037156	74.166	0.40311	75.484	75.248	75.651	1.318					37	12	4	0	0	0	0.029061	2	31138	31087;31138		88.954	42.933	1	7036800			33350	4355	16408	16475	38790;38791	38791					0.05278315994382865
SYLSSILRF	9	Unmodified	_SYLSSILRF_					0	0	0		ENSG00000175115|ENST00000320580|PACS1;ENST00000529795.1_1_11:66001292-66002875:+|nuORF;nc|ENSG00000175115|Q6VY07-2|PACS1	ENSG00000175115|ENST00000320580|PACS1	ENSG00000175115|ENST00000320580|PACS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.3051635622978	2	543.303124	1084.5917	2.8393	0.0015426	2.1424	0.001164	4.9817	0.0027066	543.3040453852922	73.58	0.40321	75.376	75.193	75.597	1.7962					32	12	3	0	0	0	0.026734	2	30902	30855;30902		92.653	48.795	1	5587100			33351	4355	16408	16475	38792;38793	38793					0.05278315994382865
SYLTGAAIW	9	Unmodified	_SYLTGAAIW_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	981.5074951052666	1	981.504009	980.496732	2.4685	0.0024228	-0.48139	-0.00047249	1.9871	0.0019503	981.5053362961733	66.623	0.25033	68.012	67.934	68.184	1.3888					11	7	2	0	0	0	0.09539	1	27960	27960		50.855	22.368	1	749430			33352	1424	16409	16476	38794	38794					0.005703825231762494
SYLTGAAIW	9	Unmodified	_SYLTGAAIW_					0	0	0		nc|ENSG00000103249|P51798-2|CLCN7;ENSG00000103249|ENST00000382745|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	nc|ENSG00000103249|P51798-2|CLCN7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	981.504009	980.496732	1.8547	0.0018204	-2.8329	-0.0027805	-0.97819	-0.00096009	981.5035948484062	66.208	0.25156	68.097	67.962	68.214	1.8889	0.042631	-0.0011533	NaN	50.855	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	553130			33353	1424	16409	16476							0.005703825231762494
SYLVQYMQF	9	Unmodified	_SYLVQYMQF_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.7829467654228	2	589.781167	1177.54778	3.255	0.0019197	-0.83107	-0.00049015	2.4239	0.0014296	589.7809143967129	74.748	0.54321	76.054	75.639	76.182	1.3063					40	17	3	0	0	0	0.066815	1	31327	31327		61.357	37.337	1	2626000			33354	477	16410	16477	38795	38795					-0.033890364942863016
SYLVQYMQF	9	Unmodified	_SYLVQYMQF_					0	0	0		ENSG00000005007|ENST00000262803|UPF1;nc|ENSG00000005007|Q92900|UPF1	ENSG00000005007|ENST00000262803|UPF1	ENSG00000005007|ENST00000262803|UPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.7817260622978	2	589.781167	1177.54778	2.9942	0.0017659	-1.1786	-0.00069509	1.8157	0.0010709	589.7809808539592	74.153	0.52477	75.949	75.717	76.242	1.7962					36	16	3	0	0	0	0.037761	2	31162	31116;31162		78.149	54.129	1	1979800			33355	477	16410	16477	38796;38797	38797					-0.033890364942863016
SYMCRHGSTA	10	Unmodified	_SYMCRHGSTA_					0	0	0		nc|ENSG00000006283|O43497-5|CACNA1G;nc|ENSG00000006283|O43497-6|CACNA1G;nc|ENSG00000006283|O43497-20|CACNA1G;nc|ENSG00000006283|O43497-4|CACNA1G;nc|ENSG00000006283|O43497-33|CACNA1G;nc|ENSG00000006283|O43497-12|CACNA1G;nc|ENSG00000006283|O43497-7|CACNA1G;nc|ENSG00000006283|O43497-16|CACNA1G;nc|ENSG00000006283|O43497-10|CACNA1G;nc|ENSG00000006283|O43497-8|CACNA1G;nc|ENSG00000006283|O43497-21|CACNA1G;nc|ENSG00000006283|O43497-25|CACNA1G;nc|ENSG00000006283|O43497-11|CACNA1G;nc|ENSG00000006283|O43497-17|CACNA1G;nc|ENSG00000006283|O43497-13|CACNA1G;nc|ENSG00000006283|O43497-19|CACNA1G;nc|ENSG00000006283|O43497-9|CACNA1G;nc|ENSG00000006283|O43497-15|CACNA1G;nc|ENSG00000006283|O43497-34|CACNA1G;nc|ENSG00000006283|O43497-2|CACNA1G;nc|ENSG00000006283|O43497-24|CACNA1G;nc|ENSG00000006283|O43497-35|CACNA1G;nc|ENSG00000006283|O43497-36|CACNA1G;nc|ENSG00000006283|O43497-3|CACNA1G;nc|ENSG00000006283|O43497-26|CACNA1G;nc|ENSG00000006283|O43497-23|CACNA1G;nc|ENSG00000006283|O43497-22|CACNA1G;nc|ENSG00000006283|O43497-18|CACNA1G;ENSG00000006283|ENST00000359106|CACNA1G	nc|ENSG00000006283|O43497-5|CACNA1G	nc|ENSG00000006283|O43497-5|CACNA1G	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1014892458916	3	371.491909	1111.4539	1.7568	0.00065262	0.10165	3.7763E-05	1.8584	0.00069038	371.4919199855771	79.707	0.37074	80.959	80.739	81.109	1.2512					29	11	3	0	0	0	0.12555	1	33438	33438		0.69767	0.23933	1	1043700			33356	504	16411	16478	38798	38798					-0.09737078868192839
SYMESVVTF	9	Unmodified	_SYMESVVTF_					0	0	0		ENST00000593004.5_1_17:58756818-58797523:+|nuORF;ENST00000591371.5_1_17:58756818-58786882:+|nuORF;ENST00000589916.5_1_17:58756818-58885438:+|nuORF;ENSG00000141376|ENST00000407086|BCAS3;nc|ENSG00000141376|Q9H6U6|BCAS3;nc|ENSG00000141376|Q9H6U6-7|BCAS3;nc|ENSG00000141376|Q9H6U6-3|BCAS3;nc|ENSG00000141376|Q9H6U6-8|BCAS3	ENST00000593004.5_1_17:58756818-58797523:+|nuORF	ENST00000593004.5_1_17:58756818-58797523:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	532.2933227419853	2	531.74425	1061.47395	2.9942	0.0015921	1.3214	0.00070266	4.3156	0.0022948	531.7446250160851	61.83	0.2192	63.787	63.719	63.938	1.9571					10	6	2	0	0	0	0.097511	1	25969	25969		16.942	0	1	1234300			33357	2955	16412	16479	38799	38799					-0.05433004656606499
SYMFVDENTF	10	Oxidation (M)	_SYM(Oxidation (M))FVDENTF_		SYM(1)FVDENTF		SYM(78)FVDENTF	0	0	1		ENST00000522309.1_1_X:134185341-134186138:-|nuORF;ENST00000464369.1_1_X:134166413-134167211:+|nuORF;ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C;ENST00000495563.5_1_X:134166413-134167211:+|nuORF;ENST00000520964.1_1_X:134185341-134186186:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.7620117068291	2	634.760629	1267.5067	1.3842	0.00087861	0.40476	0.00025693	1.7889	0.0011355	634.7606428119718	54.498	0.57436	55.903	55.485	56.06	1.4048					46	17	3	0	0	0	0.051733	2	22797	22743;22797		78.149	56.612	1	3155100			33358	2625	16413	16480	38800;38801	38801		49			-0.11634842324406236
SYMFVDENTF	10	Oxidation (M)	_SYM(Oxidation (M))FVDENTF_		SYM(1)FVDENTF		SYM(75)FVDENTF	0	0	1		ENST00000522309.1_1_X:134185341-134186138:-|nuORF;ENST00000464369.1_1_X:134166413-134167211:+|nuORF;ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C;ENST00000495563.5_1_X:134166413-134167211:+|nuORF;ENST00000520964.1_1_X:134185341-134186186:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.7613403201103	2	634.760629	1267.5067	0.95187	0.00060421	-0.30388	-0.00019289	0.64799	0.00041132	634.7610597337	53.891	0.66098	55.86	55.595	56.256	1.9697					48	20	4	0	0	0	0.059378	4	22582	22534;22582;22636;22690		74.929	55.672	1	3659600			33359	2625	16413	16480	38802;38803;38804;38805	38803		49			-0.11634842324406236
SYMFVDENTF	10	Unmodified	_SYMFVDENTF_					0	0	0		ENST00000522309.1_1_X:134185341-134186138:-|nuORF;ENST00000464369.1_1_X:134166413-134167211:+|nuORF;ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C;ENST00000495563.5_1_X:134166413-134167211:+|nuORF;ENST00000520964.1_1_X:134185341-134186186:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.7646972537041	2	626.763171	1251.51179	2.7562	0.0017275	-0.58283	-0.0003653	2.1734	0.0013622	626.7630997910627	65.167	0.56487	66.566	66.316	66.881	1.3989					64	17	6	0	0	0	0.066851	3	27326	27278;27326;27365		110.67	77.23	1	32212000			33360	2625	16413	16481	38806;38807;38808	38807					-0.10390538461774668
SYMFVDENTF	10	Unmodified	_SYMFVDENTF_					0	0	0		ENST00000522309.1_1_X:134185341-134186138:-|nuORF;ENST00000464369.1_1_X:134166413-134167211:+|nuORF;ENSG00000212747|ENST00000391440|RTL8B;ENSG00000203950|ENST00000370775|RTL8A;ENSG00000134590|ENST00000257013|RTL8C;ENST00000495563.5_1_X:134166413-134167211:+|nuORF;ENST00000520964.1_1_X:134185341-134186186:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	ENST00000522309.1_1_X:134185341-134186138:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.7639037966728	2	626.763171	1251.51179	1.3565	0.00085021	-0.089315	-5.5979E-05	1.2672	0.00079423	626.7632818374611	64.764	0.53487	66.692	66.422	66.957	1.928					66	16	6	0	0	0	0.067551	2	27142	27099;27142		107.19	72.255	1	27545000			33361	2625	16413	16481	38809;38810	38810					-0.10390538461774668
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(110)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7505370974541	2	549.749867	1097.48518	1.7089	0.00093946	0.29142	0.00016021	2.0003	0.0010997	549.7501668857171	47.992	0.71895	49.38	49.085	49.804	1.388					84	22	6	0	0	0	0.0092758	5	20065	20017;20065;20104;20143;20186		108	71.953	1	70933000			33362	4122	16414	16482	38811;38812;38813;38814;38815	38812		69			-0.059661825624516496
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(89)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7513915896416	2	549.749867	1097.48518	1.4351	0.00078896	1.1594	0.0006374	2.5946	0.0014264	549.7498771998095	48.876	3.1497	50.264	49.712	52.862	1.388					187	101	3	0	0	0	0.029093	14	20472	20282;20328;20421;20472;20582;20655;20774;20839;20900;20993;21063;21109;21316;21372		88.904	58.679	1	3112800			33363	4122	16414	16482	38816;38817;38818;38819;38820;38821;38822;38823;38824;38825;38826;38827;38828;38829	38819		69			-0.059661825624516496
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(44)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7512084841728	2	549.749867	1097.48518	0.71587	0.00039355	0.75907	0.0004173	1.4749	0.00081085	549.7498261425612	52.017	1.7591	53.414	52.87	54.63	1.3966					111	57	3	0	0	0	0.11643	1	21737	21737		43.858	24.419	1	2050400			33364	4122	16414	16482	38830	38830		69			-0.059661825624516496
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(100)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7509643435478	2	549.749867	1097.48518	2.5427	0.0013978	-0.35082	-0.00019286	2.1919	0.001205	549.7497357073097	47.536	0.61868	49.512	49.217	49.836	1.976					79	19	6	0	0	0	0.018723	5	19871	19834;19871;19910;19948;19988		100.37	64.244	1	82423000			33365	4122	16414	16482	38831;38832;38833;38834;38835	38832		69			-0.059661825624516496
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(82)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7504150271416	2	549.749867	1097.48518	1.7576	0.00096625	0.26234	0.00014422	2.02	0.0011105	549.7495629967718	48.359	3.1078	50.336	49.806	52.914	1.9772					193	100	3	0	0	0	0.033794	8	20887	20084;20147;20617;20673;20803;20887;20928;20985		81.613	58.465	1	3059900			33366	4122	16414	16482	38836;38837;38838;38839;38840;38841;38842;38843	38841		69			-0.059661825624516496
SYMGHFDLL	9	Oxidation (M)	_SYM(Oxidation (M))GHFDLL_		SYM(1)GHFDLL		SYM(52)GHFDLL	0	0	1		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7487060427666	2	549.749867	1097.48518	0.70286	0.0003864	0.89702	0.00049314	1.5999	0.00087953	549.7498220954475	51.318	1.7095	53.293	53.03	54.739	1.9753					95	57	2	0	0	0	0.091139	1	21578	21578		52.268	35.155	1	1923100			33367	4122	16414	16482	38844	38844		69			-0.059661825624516496
SYMGHFDLL	9	Unmodified	_SYMGHFDLL_					0	0	0		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7523071169853	2	541.75241	1081.49027	2.2131	0.001199	-1.3755	-0.00074519	0.83763	0.00045379	541.7519724797171	59.032	1.829	60.452	60.166	61.995	1.4196					177	59	6	0	0	0	0.0075027	12	24726	24681;24726;24778;24817;24857;24910;24951;25003;25055;25107;25293;25361		112.59	66.572	1	352700000			33368	4122	16414	16483	38845;38846;38847;38848;38849;38850;38851;38852;38853;38854;38855;38856	38846					-0.047218786998428186
SYMGHFDLL	9	Unmodified	_SYMGHFDLL_					0	0	0		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7540161013603	2	541.75241	1081.49027	3.2104	0.0017392	-0.73263	-0.0003969	2.4778	0.0013423	541.7524863548134	60.985	0.69114	62.405	61.964	62.655	1.4196					31	21	2	0	0	0	0.27148	1	25582	25582		26.884	11.036	1	726090			33369	4122	16414	16483	38857	38857					-0.047218786998428186
SYMGHFDLL	9	Unmodified	_SYMGHFDLL_					0	0	0		ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	ENSG00000169976|ENST00000367569|SF3B5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7526733279228	2	541.75241	1081.49027	1.9085	0.0010339	-1.4084	-0.000763	0.50007	0.00027092	541.7519087850814	58.559	2.0833	60.528	60.181	62.264	1.969					199	67	6	0	0	0	0.006164	11	24555	24461;24504;24555;24607;24647;24688;24744;24796;24848;24900;25174		117.6	73.74	1	322760000			33370	4122	16414	16483	38858;38859;38860;38861;38862;38863;38864;38865;38866;38867;38868	38860					-0.047218786998428186
SYMLVNENRF	10	Unmodified	_SYMLVNENRF_					0	0	0		ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.8063232302666	2	636.805705	1271.59686	1.7185	0.0010944	-1.2779	-0.00081375	0.44068	0.00028063	636.8050483200492	41.846	0.58685	43.172	42.811	43.398	1.3254					73	18	5	0	0	0	2.9244E-08	4	17493	17450;17493;17545;17599		203.64	155.29	1	60887000			33371	4606	16415	16484	38869;38870;38871;38872	38870					-0.028077482053504355
SYMLVNENRF	10	Unmodified	_SYMLVNENRF_					0	0	0		ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	ENSG00000182195|ENST00000370526|LDOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.8065673708916	2	636.805705	1271.59686	1.5125	0.00096317	-1.194	-0.00076032	0.31855	0.00020286	636.8051727987333	41.303	0.48483	43.195	42.96	43.444	1.8927					69	15	6	0	0	0	0.015057	4	17298	17253;17298;17348;17391		185.05	136.7	1	60551000			33372	4606	16415	16484	38873;38874;38875;38876	38874					-0.028077482053504355
SYMWTINNF	9	Oxidation (M)	_SYM(Oxidation (M))WTINNF_		SYM(1)WTINNF		SYM(57)WTINNF	0	0	1		ENST00000513080.5_1_17:47699309-47700178:-|nuORF;ENSG00000121067|ENST00000504102|SPOP;ENSG00000144228|ENST00000280098|SPOPL	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.2616454958916	2	596.260599	1190.50665	2.2525	0.001343	2.2313	0.0013304	4.4837	0.0026735	596.2607886122876	65.944	0.66399	67.343	67.004	67.668	1.3989					50	21	3	0	0	0	0.076627	1	27610	27610		57.471	40.529	1	2423800			33373	2128	16416	16485	38877	38877		41			-0.08098797533739344
SYMWTINNF	9	Oxidation (M)	_SYM(Oxidation (M))WTINNF_		SYM(1)WTINNF		SYM(57)WTINNF	0	0	1		ENST00000513080.5_1_17:47699309-47700178:-|nuORF;ENSG00000121067|ENST00000504102|SPOP;ENSG00000144228|ENST00000280098|SPOPL	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.2634155154228	2	596.260599	1190.50665	1.8459	0.0011006	2.7003	0.0016101	4.5462	0.0027107	596.2609331900765	65.471	0.86494	67.379	66.751	67.616	1.9085					46	27	3	0	0	0	0.076627	1	27437	27437		57.471	40.529	1	2356100			33374	2128	16416	16485	38878	38878		41			-0.08098797533739344
SYMWTINNF	9	Unmodified	_SYMWTINNF_					0	0	0		ENST00000513080.5_1_17:47699309-47700178:-|nuORF;ENSG00000121067|ENST00000504102|SPOP;ENSG00000144228|ENST00000280098|SPOPL	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2651244997978	2	588.263142	1174.51173	2.9223	0.0017191	0.20753	0.00012208	3.1298	0.0018412	588.2634774870128	75.039	0.4958	76.345	76.15	76.646	1.3063					52	15	5	0	0	0	0.0092758	3	31513	31464;31513;31570		108	65.902	1	10108000			33375	2128	16416	16486	38879;38880;38881	38880					-0.06854493671130513
SYMWTINNF	9	Unmodified	_SYMWTINNF_					0	0	0		ENST00000513080.5_1_17:47699309-47700178:-|nuORF;ENSG00000121067|ENST00000504102|SPOP;ENSG00000144228|ENST00000280098|SPOPL	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	ENST00000513080.5_1_17:47699309-47700178:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2650634646416	2	588.263142	1174.51173	2.8618	0.0016835	0.34528	0.00020311	3.207	0.0018866	588.2634235380981	74.623	0.47675	76.404	76.131	76.608	1.7817					42	14	4	0	0	0	0.023786	3	31305	31266;31305;31365		96.285	62.182	1	11151000			33376	2128	16416	16486	38882;38883;38884	38883					-0.06854493671130513
SYNEHWNYL	9	Unmodified	_SYNEHWNYL_					0	0	0		ENST00000535739.5_1_12:6493425-6494510:+|nuORF;LTBR|p.C170Vfs*57|1|0.19|ENSG00000111321|chr12:6386099-6386100|-/GGTGCAGGGGACACAGGAGGTGGTTCTTCTCAGTA|frameshift_variant;nc|ENSG00000111321|P36941-2|LTBR;ENSG00000111321|ENST00000228918|LTBR	ENST00000535739.5_1_12:6493425-6494510:+|nuORF	ENST00000535739.5_1_12:6493425-6494510:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.7714111208916	2	613.26727	1224.51999	2.1753	0.0013341	0.092689	5.6843E-05	2.268	0.0013909	613.2665905410706	40.514	0.30849	41.824	41.637	41.945	1.3102					18	9	3	0	0	0	0.32838	1	16996	16996		24.021	9.1823	1	1047800			33377	1734	16417	16487	38885	38885					-0.08329223430155253
SYNEHWNYL	9	Unmodified	_SYNEHWNYL_					0	0	0		ENST00000535739.5_1_12:6493425-6494510:+|nuORF;LTBR|p.C170Vfs*57|1|0.19|ENSG00000111321|chr12:6386099-6386100|-/GGTGCAGGGGACACAGGAGGTGGTTCTTCTCAGTA|frameshift_variant;nc|ENSG00000111321|P36941-2|LTBR;ENSG00000111321|ENST00000228918|LTBR	ENST00000535739.5_1_12:6493425-6494510:+|nuORF	ENST00000535739.5_1_12:6493425-6494510:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.7703124880791	2	613.26727	1224.51999	1.85	0.0011345	1.5794	0.00096858	3.4294	0.0021031	613.2683125472307	40.077	0.31479	41.94	41.768	42.083	1.8624					21	9	3	0	0	0	0.25667	2	16785	16785;16841		27.629	12.791	1	1116400			33378	1734	16417	16487	38886;38887	38886					-0.08329223430155253
SYNGKLYVF	9	Unmodified	_SYNGKLYVF_					0	0	0		ENSG00000174010|ENST00000328046|KLHL15	ENSG00000174010|ENST00000328046|KLHL15	ENSG00000174010|ENST00000328046|KLHL15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7822143435478	2	545.782025	1089.5495	2.1254	0.00116	-0.86468	-0.00047193	1.2608	0.0006881	545.7814479776463	43.694	0.24938	45.638	45.485	45.734	1.9438					17	7	3	0	0	0	0.35391	1	18314	18314		22.736	7.898	1	1085600			33379	4310	16418	16488	38888	38888					0.008303405859805935
SYNGKLYVF	9	Unmodified	_SYNGKLYVF_					0	0	0		ENSG00000174010|ENST00000328046|KLHL15	ENSG00000174010|ENST00000328046|KLHL15	ENSG00000174010|ENST00000328046|KLHL15	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	545.782025	1089.5495	2.2496	0.0012278	0.019262	1.0513E-05	2.2689	0.0012383	545.7819494380524	44.303	0.2905	45.669	45.545	45.836	1.3653	0.015512	0.00056745	NaN	22.736	19	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1204700			33380	4310	16418	16488							0.008303405859805935
SYNNFFRMF	9	Oxidation (M)	_SYNNFFRM(Oxidation (M))F_		SYNNFFRM(1)F		SYNNFFRM(130)F	0	0	1		ENST00000517754.1_1_8:26221160-26227926:+|nuORF;ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-6|PPP2R2B;ENSG00000156475|ENST00000394411|PPP2R2B;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.2739745974541	2	621.274041	1240.53353	0.0023953	1.4882E-06	0.070907	4.4053E-05	0.073303	4.5541E-05	621.2739509339893	56.18	0.5313	57.589	57.435	57.966	1.4099					37	19	3	0	0	0	0.0033884	2	23540	23540;23583		126.57	82.456	1	7143300			33381	5273	16419	16489	38889;38890	38889		95			-0.07711688922563553
SYNNFFRMF	9	Oxidation (M)	_SYNNFFRM(Oxidation (M))F_		SYNNFFRM(1)F		SYNNFFRM(100)F	0	0	1		ENST00000517754.1_1_8:26221160-26227926:+|nuORF;ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-6|PPP2R2B;ENSG00000156475|ENST00000394411|PPP2R2B;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2720214724541	2	621.274041	1240.53353	0.27233	0.00016919	-0.31628	-0.0001965	-0.043948	-2.7304E-05	621.2736705491674	55.701	0.43185	57.669	57.469	57.901	1.9684					35	17	3	0	0	0	0.015029	3	23318	23318;23365;23423		103.35	67.741	1	4889200			33382	5273	16419	16489	38891;38892;38893	38891		95			-0.07711688922563553
SYNNFFRMF	9	Unmodified	_SYNNFFRMF_					0	0	0		ENST00000517754.1_1_8:26221160-26227926:+|nuORF;ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-6|PPP2R2B;ENSG00000156475|ENST00000394411|PPP2R2B;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.2777587771416	2	613.276583	1224.53861	2.7759	0.0017024	-1.3682	-0.0008391	1.4077	0.00086331	613.2759338213908	70.322	0.57272	71.676	71.397	71.97	1.3536					60	17	5	0	0	0	2.4291E-05	4	29497	29453;29497;29536;29576		168.66	110.94	1	33276000			33383	5273	16419	16490	38894;38895;38896;38897	38895					-0.06467385059931985
SYNNFFRMF	9	Unmodified	_SYNNFFRMF_					0	0	0		ENST00000517754.1_1_8:26221160-26227926:+|nuORF;ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A;ENST00000490777.2_10:133754324-133769464:+|nuORF;nc|ENSG00000156475|Q00005-6|PPP2R2B;ENSG00000156475|ENST00000394411|PPP2R2B;nc|ENSG00000156475|Q00005-2|PPP2R2B;nc|ENSG00000156475|Q00005-3|PPP2R2B;ENSG00000175470|ENST00000455566|PPP2R2D;nc|ENSG00000156475|Q00005-4|PPP2R2B;nc|ENSG00000156475|Q00005-5|PPP2R2B;nc|ENSG00000156475|Q00005-7|PPP2R2B	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.2771484255791	2	613.276583	1224.53861	2.7197	0.0016679	-1.6072	-0.00098565	1.1125	0.00068225	613.2757333389512	69.74	0.53944	71.577	71.309	71.849	1.8378					64	16	5	0	0	0	2.4291E-05	4	29287	29202;29248;29287;29326		168.66	110.94	1	33044000			33384	5273	16419	16490	38898;38899;38900;38901	38900					-0.06467385059931985
SYNPLWLRI	9	Unmodified	_SYNPLWLRI_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3260375857353	2	581.324391	1160.63423	2.0933	0.0012169	-3.4173	-0.0019866	-1.324	-0.00076968	581.3252734774259	68.229	0.76974	69.607	69.364	70.134	1.3778					49	24	3	0	0	0	0.026836	2	28628	28579;28628		92.491	46.792	1	5506100			33385	803	16420	16491	38902;38903	38903					0.06033711122586283
SYNPLWLRI	9	Unmodified	_SYNPLWLRI_					0	0	0		ENSG00000066279|ENST00000367409|ASPM;nc|ENSG00000066279|Q8IZT6-2|ASPM	ENSG00000066279|ENST00000367409|ASPM	ENSG00000066279|ENST00000367409|ASPM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3275024294853	2	581.324391	1160.63423	1.696	0.00098591	-3.2077	-0.0018647	-1.5118	-0.00087883	581.325246512229	67.631	0.77205	69.501	69.238	70.01	1.87					51	24	3	0	0	0	0.044893	3	28321	28321;28369;28425		71.922	45.654	1	4300100			33386	803	16420	16491	38904;38905;38906	38904					0.06033711122586283
SYPAFWTSF	9	Unmodified	_SYPAFWTSF_					0	0	0		ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2553588747978	2	553.2531	1104.49165	3.306	0.0018291	0.78553	0.0004346	4.0915	0.0022637	553.2535062580471	82.548	0.38263	83.761	83.537	83.92	1.2125					27	11	3	0	0	0	0.37357	2	34626	34626;34680		21.747	10.106	1	2349000			33387	5748	16421	16492	38907;38908	38907					-0.05641921339451983
SYPAFWTSF	9	Unmodified	_SYPAFWTSF_					0	0	0		ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1105.503466784954	1	1105.49892	1104.49165	3.0339	0.003354	1.7748	0.0019621	4.8087	0.0053161	1105.4989568583921	82.566	0.31793	83.779	83.602	83.92	1.2125					14	9	2	0	0	0	0.002761	1	34663	34663		128.37	86.271	1	2323900			33388	5748	16421	16492	38909	38909					-0.05641921339451983
SYPAFWTSF	9	Unmodified	_SYPAFWTSF_					0	0	0		ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.2567016482353	2	553.2531	1104.49165	3.4712	0.0019205	1.4862	0.00082224	4.9574	0.0027427	553.253864738804	82.08	0.34792	83.75	83.575	83.923	1.67					23	10	3	0	0	0	0.5697	1	34428	34428		12.532	2.3482	1	1228700			33389	5748	16421	16492	38910	38910					-0.05641921339451983
SYPAFWTSF	9	Unmodified	_SYPAFWTSF_					0	0	0		ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	ENST00000299505.6_1_19:34791118-34791184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1105.503832995892	1	1105.49892	1104.49165	3.6215	0.0040035	-1.9534	-0.0021595	1.6681	0.0018441	1105.4989135919327	82.112	0.25275	83.782	83.639	83.892	1.67					13	7	2	0	0	0	0.00020592	1	34441	34441		141.83	103.85	1	2374300			33390	5748	16421	16492	38911	38911					-0.05641921339451983
SYPAKLSFI	9	Unmodified	_SYPAKLSFI_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|21|1|sense;L1PA7_dup4924|chr6:2286245-2292695:+|1.635145983497484|0.2509383892152794|2.7|429.0|137|3|sense;L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|84|2|sense;L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|137|3|sense;L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|17|1|sense;L1PA5_dup4810|chr6:152028159-152034290:+|1.1914758245087174|0.3642032674974997|1.71|427.0|134|3|sense;L1PA2_dup23|chr1:43114528-43120516:-|1.3533449411662286|0.3152228216366226|2.1|404.0|45|2|sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|14|1|sense;nc|ENSG1000|Q9UN81|L1_ORF1;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|148|3|sense;L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|177|3|sense;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|7|1|sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|21|1|sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|21|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2888061404228	2	513.286943	1024.55933	2.0424	0.0010483	1.5481	0.00079463	3.5905	0.001843	513.2891422121801	49.682	0.59621	51.659	51.286	51.883	1.9772					41	18	3	0	0	0	0.32838	1	20822	20822		24.021	3.5669	1	4180900			33391	7673	16422	16493	38912	38912					0.04803528591378381
SYPDLLPTF	9	Unmodified	_SYPDLLPTF_					0	0	0		nc|ENSG00000143486|P41214-2|EIF2D;ENSG00000143486|ENST00000271764|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7671386599541	2	526.768583	1051.52261	2.6689	0.0014059	-1.4777	-0.0007784	1.1912	0.00062748	526.7674246079696	80.646	0.33182	81.879	81.651	81.983	1.2332					25	10	3	0	0	0	0.12174	2	33798	33798;33848		42.095	17.421	1	3441300			33392	3036	16423	16494	38913;38914	38913					-0.0010876802521124773
SYPDLLPTF	9	Unmodified	_SYPDLLPTF_					0	0	0		nc|ENSG00000143486|P41214-2|EIF2D;ENSG00000143486|ENST00000271764|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1052.533129870892	1	1052.52989	1051.52261	2.8517	0.0030015	-0.30802	-0.0003242	2.5437	0.0026773	1052.5294453581007	80.603	0.3614	81.842	81.658	82.019	1.2398					25	11	3	0	0	0	0.033794	2	33872	33818;33872		81.613	28.038	1	4296100			33393	3036	16423	16494	38915;38916	38916					-0.0010876802521124773
SYPDLLPTF	9	Unmodified	_SYPDLLPTF_					0	0	0		nc|ENSG00000143486|P41214-2|EIF2D;ENSG00000143486|ENST00000271764|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1052.531176745892	1	1052.52989	1051.52261	1.9969	0.0021018	-1.6149	-0.0016997	0.38205	0.00040212	1052.5284893851417	80.137	0.36185	81.854	81.663	82.025	1.7167					23	11	3	0	0	0	0.045797	2	33600	33600;33659		71.134	26.727	1	3606300			33394	3036	16423	16494	38917;38918	38917					-0.0010876802521124773
SYPDLLPTF	9	Unmodified	_SYPDLLPTF_					0	0	0		nc|ENSG00000143486|P41214-2|EIF2D;ENSG00000143486|ENST00000271764|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	nc|ENSG00000143486|P41214-2|EIF2D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.7693969607353	2	526.768583	1051.52261	1.1792	0.00062114	-1.6	-0.00084284	-0.42087	-0.0002217	526.7674782672882	80.204	0.33322	81.921	81.663	81.996	1.7167					18	10	2	0	0	0	0.19075	1	33627	33627		34.102	9.4286	1	3132800			33395	3036	16423	16494	38919	38919					-0.0010876802521124773
SYPDNFLHI	9	Unmodified	_SYPDNFLHI_					0	0	0		nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2707397341728	2	553.269281	1104.52401	1.6288	0.00090118	1.731	0.00095773	3.3599	0.0018589	553.2697405615727	56.785	0.42905	58.199	57.971	58.4	1.4145					44	13	4	0	0	0	0.03795	3	23840	23750;23801;23840		77.984	47.786	1	29103000			33396	729	16424	16495	38920;38921;38922	38922					-0.02407133936435457
SYPDNFLHI	9	Unmodified	_SYPDNFLHI_					0	0	0		nc|ENSG00000057663|Q9H1Y0-2|ATG5;ENSG00000057663|ENST00000369076|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	nc|ENSG00000057663|Q9H1Y0-2|ATG5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.2703735232353	2	553.269281	1104.52401	1.0605	0.00058674	1.8403	0.0010182	2.9008	0.0016049	553.2698044682483	56.226	0.43099	58.194	57.933	58.364	1.9684					44	13	4	0	0	0	0.03795	3	23581	23535;23581;23621		77.984	47.786	1	20728000			33397	729	16424	16495	38923;38924;38925	38924					-0.02407133936435457
SYPHLSLLF	9	Unmodified	_SYPHLSLLF_					0	0	0		ENST00000299964.3_1_11:114166574-114166922:+|nuORF	ENST00000299964.3_1_11:114166574-114166922:+|nuORF	ENST00000299964.3_1_11:114166574-114166922:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7933837771416	2	538.792392	1075.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.899	1	68.287	67.787	68.787	1.3888								0	0	0	0.10193	1	28063	28063		34.102	1.9855	1				33398	5750	16425	16496	38926	38926					0.035469309656718906
SYPKIIEEF	9	Unmodified	_SYPKIIEEF_					0	0	0		nc|ENSG00000144554|Q9BXW9-4|FANCD2;nc|ENSG00000144554|Q9BXW9-3|FANCD2;ENSG00000144554|ENST00000675286|FANCD2;nc|ENSG00000144554|Q9BXW9-1|FANCD2	nc|ENSG00000144554|Q9BXW9-4|FANCD2	nc|ENSG00000144554|Q9BXW9-4|FANCD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2955200076103	2	563.294965	1124.57538	0.81095	0.0004568	-1.5144	-0.00085306	-0.70346	-0.00039626	563.2935923893422	53.207	0.76276	54.608	53.902	54.665	1.4005					43	23	2	0	0	0	0.30098	1	22251	22251		25.399	9.5521	1	2727600			33399	3081	16426	16497	38927	38927					0.018071900376071426
SYPNVFLVF	9	Unmodified	_SYPNVFLVF_					0	0	0		POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant;nc|ENSG00000013503|Q9NW08-2|POLR3B;ENSG00000013503|ENST00000228347|POLR3B	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1085.574267566204	1	1085.56661	1084.55933	4.0176	0.0043614	-0.14896	-0.00016171	3.8686	0.0041997	1085.5693624360536	94.428	0.21442	95.17	95.044	95.258	0.74124					9	6	2	0	0	0	0.12251	1	39734	39734		41.84	17.819	1	1071300			33400	583	16427	16498	38928	38928					0.020435285913663392
SYPNVFLVF	9	Unmodified	_SYPNVFLVF_					0	0	0		POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant;nc|ENSG00000013503|Q9NW08-2|POLR3B;ENSG00000013503|ENST00000228347|POLR3B	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2889282107353	2	543.286943	1084.55933	4.1347	0.0022463	1.0704	0.00058153	5.2051	0.0028279	543.287296064691	94.404	0.40782	95.146	94.95	95.358	0.74124					27	12	3	0	0	0	0.19075	1	39744	39744		34.102	12.356	1	1775200			33401	583	16427	16498	38929	38929					0.020435285913663392
SYPNVFLVF	9	Unmodified	_SYPNVFLVF_					0	0	0		POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant;nc|ENSG00000013503|Q9NW08-2|POLR3B;ENSG00000013503|ENST00000228347|POLR3B	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2883788943291	2	543.286943	1084.55933	3.2825	0.0017833	0.062034	3.3702E-05	3.3445	0.001817	543.287017539424	93.917	0.53603	95.106	94.863	95.399	1.1887					30	16	3	0	0	0	0.27148	1	39520	39520		26.884	8.7487	1	1443500			33402	583	16427	16498	38930	38930					0.020435285913663392
SYPRRFSTL	9	Unmodified	_SYPRRFSTL_					0	0	0		ENST00000403825.7_1_7:112090541-112090697:+|nuORF	ENST00000403825.7_1_7:112090541-112090697:+|nuORF	ENST00000403825.7_1_7:112090541-112090697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2046996951103	3	376.204974	1125.59309	0.1066	4.0102E-05	-1.4626	-0.00055022	-1.356	-0.00051012	376.20451725811614	21.118	0.29083	22.244	22.072	22.363	1.1254					17	9	3	0	0	0	0.31127	1	8814	8814		24.882	4.0104	1	2010300			33403	6354	16428	16499	38931	38931					0.03531950083151969
SYPRRFSTL	9	Unmodified	_SYPRRFSTL_					0	0	0		ENST00000403825.7_1_7:112090541-112090697:+|nuORF	ENST00000403825.7_1_7:112090541-112090697:+|nuORF	ENST00000403825.7_1_7:112090541-112090697:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	376.204974	1125.59309	0.1066	4.0102E-05	-1.4626	-0.00055022	-1.356	-0.00051012	376.20451725811614	21.118	0.29083	22.244	22.072	22.363	1.1254	-0.015291	0.0001061	NaN	24.882	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2010300			33404	6354	16428	16499							0.03531950083151969
SYPTFFPRF	9	Unmodified	_SYPTFFPRF_					0	0	0		HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant;ENSG00000071794|ENST00000310053|HLTF;ENST00000481663.1_1_3:148801501-148804285:-|nuORF	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.2905761599541	2	581.290017	1160.56548	1.8198	0.0010578	-0.57071	-0.00033175	1.2491	0.00072609	581.2895346373011	67.68	0.88163	69.058	68.546	69.427	1.3778					68	28	3	0	0	0	0.091139	2	28359	28309;28359		52.268	35.326	1	3473400			33405	873	16429	16500	38932;38933	38933					-0.008379531770970061
SYPTFFPRF	9	Unmodified	_SYPTFFPRF_					0	0	0		HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant;ENSG00000071794|ENST00000310053|HLTF;ENST00000481663.1_1_3:148801501-148804285:-|nuORF	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.2904540896416	2	581.290017	1160.56548	1.1954	0.00069489	-0.4094	-0.00023798	0.78602	0.00045691	581.2895479176761	67.163	0.793	69.052	68.557	69.35	1.8889					66	25	3	0	0	0	0.091139	2	28151	28100;28151		52.268	34.122	1	3447600			33406	873	16429	16500	38934;38935	38935					-0.008379531770970061
SYQAIIMLW	9	Unmodified	_SYQAIIMLW_					0	0	0		ENSG00000257138|ENST00000547270|TAS2R38	ENSG00000257138|ENST00000547270|TAS2R38	ENSG00000257138|ENST00000547270|TAS2R38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2944213747978	2	562.794078	1123.5736	1.1574	0.00065136	-1.7944	-0.0010099	-0.63704	-0.00035852	563.293612047496	52.588	0.8742	54.56	53.862	54.736	1.9722					50	27	3	0	0	0	0.51189	1	21859	21859		14.838	1.3304	1	3612800			33407	5408	16430	16501	38936	38936					0.016758577480004533
SYQCEECGKA	10	Unmodified	_SYQCEECGKA_					0	0	0		ENST00000594254.1_1_19:21565732-21566473:+|nuORF;ENSG00000172687|ENST00000683779|ZNF738;ENST00000600692.5_1_19:21350445-21366834:+|nuORF;ENSG00000196705|ENST00000311048|ZNF431	ENST00000594254.1_1_19:21565732-21566473:+|nuORF	ENST00000594254.1_1_19:21565732-21566473:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.2181274294853	2	559.218074	1116.42159	0.13953	7.8027E-05	-2.2539	-0.0012604	-2.1144	-0.0011824	559.216949467988	15.819	0.34138	15.819	15.621	15.962	0					20	10	3	0	0	0	0.88314	1	6581	6581		3.2813	0	1	724020			33408	4247	16431	16502	38937	38937					-0.13195911061848165
SYQKLLFKF	9	Unmodified	_SYQKLLFKF_					0	0	0		nc|ENSG00000023287|Q8TDY2-2|RB1CC1;ENSG00000023287|ENST00000025008|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	nc|ENSG00000023287|Q8TDY2-2|RB1CC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	587.3384277224541	2	587.336967	1172.65938	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.293	1	50.27	49.77	50.77	1.9772								0	0	0	0.026273	1	20228	20228		74.2	39.798	1				33409	617	16432	16503	38938	38938					0.07995765925170417
SYQKVIELF	9	Unmodified	_SYQKVIELF_					0	0	0		ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK;chr8:27833133-27837710|421|26.09|0.78|5.07|-|ENST00000522944|PBK,PBK	ENSG00000168078|ENST00000301905|PBK	ENSG00000168078|ENST00000301905|PBK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8115722537041	2	563.810782	1125.60701	1.6739	0.00094376	-0.88982	-0.00050169	0.78408	0.00044207	563.8103452017393	57.032	0.75237	58.446	58.123	58.875	1.4145					90	25	5	0	0	0	0.0051116	5	23865	23865;23904;23943;23995;24044		121.53	48.646	1	214310000			33410	295	16433	16504	38939;38940;38941;38942;38943	38939					0.04923182791549152
SYQKVIELF	9	Unmodified	_SYQKVIELF_					0	0	0		ENSG00000168078|ENST00000301905|PBK;nc|ENSG00000168078|Q96KB5-2|PBK;chr8:27833133-27837710|421|26.09|0.78|5.07|-|ENST00000522944|PBK,PBK	ENSG00000168078|ENST00000301905|PBK	ENSG00000168078|ENST00000301905|PBK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8113281130791	2	563.810782	1125.60701	1.0025	0.00056522	-0.18161	-0.0001024	0.82088	0.00046282	563.8107180000455	56.489	0.72768	58.458	58.117	58.845	1.9684					88	23	6	0	0	0	0.0011269	5	23698	23609;23647;23698;23753;23821		133.05	64.971	1	155300000			33411	295	16433	16504	38944;38945;38946;38947;38948	38946					0.04923182791549152
SYQKVMALW	9	Unmodified	_SYQKVMALW_					0	0	0		nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;ENST00000476350.1_1_1:39768622-39838291:+|nuORF	nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2944824099541	2	563.291702	1124.56885	0.81095	0.0004568	4.2776	0.0024095	5.0885	0.0028663	563.2935923893422	53.207	0.76276	54.608	53.902	54.665	1.4005					43	23	2	0	0	0	0.42305	1	22087	22087		19.257	9.9096	1	2727600			33412	2341	16434	16505	38949	38949					0.011549736052529624
SYQLFKTEW	9	Unmodified	_SYQLFKTEW_					0	0	0		tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.2994262576103	2	601.298039	1200.58152	2.7444	0.0016502	-0.62197	-0.00037399	2.1225	0.0012762	601.2976363666263	50.261	0.50446	51.652	51.355	51.86	1.3911					44	15	4	0	0	0	0.098163	3	21015	20967;21015;21053		49.933	13.806	1	11962000			33413	16452	16435	16506	38950;38951;38952	38951					-0.010742917308789401
SYQLFKTEW	9	Unmodified	_SYQLFKTEW_					0	0	0		tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	tr|A0A553SP63|A0A553SP63_NIACIOrotidine5'-phosphatedecarboxylaseOS=NialliacirculansOX=1397GN=pyrFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.2988159060478	2	601.298039	1200.58152	1.7348	0.0010431	0.10184	6.1234E-05	1.8366	0.0011043	601.2979980241339	49.673	0.53385	51.651	51.349	51.883	1.9772					49	16	4	0	0	0	0.098163	3	20833	20752;20794;20833		49.933	11.757	1	10604000			33414	16452	16435	16506	38953;38954;38955	38955					-0.010742917308789401
SYQSVFLFL	9	Unmodified	_SYQSVFLFL_					0	0	0		ENSG00000077585|ENST00000366592|GPR137B;ENST00000366591.4_1_1:236305922-236343463:+|nuORF	ENSG00000077585|ENST00000366592|GPR137B	ENSG00000077585|ENST00000366592|GPR137B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2963744997978	2	552.292225	1102.5699	3.7672	0.0020806	4.4164	0.0024392	8.1836	0.0045197	552.2947371200439	96.072	0.25981	96.494	96.281	96.541	0.4212					13	8	3	0	0	0	0.098163	1	40424	40424		49.933	28.186	1	1743500			33415	965	16436	16507	38956	38956					0.02271511245817237
SYQSVFLFL	9	Unmodified	_SYQSVFLFL_					0	0	0		ENSG00000077585|ENST00000366592|GPR137B;ENST00000366591.4_1_1:236305922-236343463:+|nuORF	ENSG00000077585|ENST00000366592|GPR137B	ENSG00000077585|ENST00000366592|GPR137B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.292225	1102.5699	3.177	0.0017546	5.087	0.0028095	8.264	0.0045641	552.294389472207	95.821	0.16238	96.223	96.143	96.305	0.40208	-0.13515	0.00031938	NaN	49.933	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	745600			33416	965	16436	16507							0.02271511245817237
SYRELFEFF	9	Unmodified	_SYRELFEFF_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.2947875857353	2	619.298039	1236.58152	2.4613	0.0015243	-0.52067	-0.00032245	1.9406	0.0012018	619.297598713852	79.379	1.5497	80.646	80.347	81.897	1.2668					120	49	4	0	0	0	0.026734	6	33235	33235;33282;33321;33360;33414;33467		92.653	60.348	1	17873000			33417	1733	16437	16508	38957;38958;38959;38960;38961;38962	38957					-0.027302917308816177
SYRELFEFF	9	Unmodified	_SYRELFEFF_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.2986938357353	2	619.298039	1236.58152	1.8027	0.0011164	-0.36548	-0.00022634	1.4372	0.00089004	619.297740233522	78.756	1.2044	80.491	80.289	81.493	1.735					103	38	4	0	0	0	0.02878	6	33032	32982;33032;33084;33139;33195;33247		89.401	55.298	1	19447000			33418	1733	16437	16508	38963;38964;38965;38966;38967;38968	38964					-0.027302917308816177
SYRETGTFIL	10	Unmodified	_SYRETGTFIL_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.8105346560478	2	593.808771	1185.60299	1.9448	0.0011548	3.5408	0.0021025	5.4856	0.0032574	593.8105636120034	67.536	1.04	68.913	68.575	69.615	1.3778					82	33	3	0	0	0	0.57775	1	28520	28520		24.021	1.2843	1	3018700			33419	2055	16438	16509	38969	38969					0.017610932978641358
SYRQKKRKG	9	Unmodified	_SYRQKKRKG_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|97|2|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|97|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8432494997978	2	575.843813	1149.67307	4.6935	0.0027027	-1.2074	-0.00069529	3.4861	0.0020075	575.8428647640794	88.673	0.35363	90.119	89.953	90.306	1.4467					16	10	2	0	0	0	0.7849	1	37420	37420		3.9444	0.3479	1	1324800	+		33420	14322	16439	16510	38970	38970					0.10422436476960684
SYRRYTKWM	9	Unmodified	_SYRRYTKWM_					0	0	0			REV__ENSG00000071189|ENST00000428135|SNX13	REV__ENSG00000071189|ENST00000428135|SNX13	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879577517509	3	430.885247	1289.63391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.94	110.44	111.44	0.16133								0	0	0	0.42693	1	48097	48097		0.26902	0	1		+		33421	8723	16440	16511	38971	38971					0.0006796813111122901
SYSHIMALI	9	Unmodified	_SYSHIMALI_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7695190310478	2	517.770603	1033.52665	0.70873	0.00036696	-0.66346	-0.00034352	0.045266	2.3437E-05	517.7702654224615	55.942	0.22295	57.351	57.241	57.464	1.4099					22	14	2	0	0	0	0.033521	2	23473	23434;23473		81.864	31.009	1	9014600			33422	3572	16441	16512	38972;38973	38973					0.011229981968881475
SYSHIMALI	9	Unmodified	_SYSHIMALI_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7712890505791	2	517.770603	1033.52665	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.409	1	57.377	56.877	57.877	1.9684								0	0	0	0.02596	1	23234	23234		81.864	31.009	1				33423	3572	16441	16512	38974	38974					0.011229981968881475
SYSLFHPLL	9	Unmodified	_SYSLFHPLL_					0	0	0		ENST00000488347.5_1_X:101149758-101186981:-|nuORF;ENST00000458570.5_1_X:101149758-101187002:-|nuORF	ENST00000488347.5_1_X:101149758-101186981:-|nuORF	ENST00000488347.5_1_X:101149758-101186981:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7932617068291	2	538.792392	1075.57023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.459	1	68.348	67.848	68.848	1.8889								0	0	0	0.048885	1	27878	27878		56.541	26.316	1				33424	6657	16442	16513	38975	38975					0.035469309656718906
SYSMEENCNDN	11	Unmodified	_SYSMEENCNDN_					0	0	0			REV__nc|ENSG00000054523|O60333-3|KIF1B	REV__nc|ENSG00000054523|O60333-3|KIF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	436.1531555056572	3	435.816787	1304.42853	1.9642	0.00085604	-2.2448	-0.00097833	-0.28061	-0.00012229	436.1508297042894	64.734	0.31561	66.662	66.518	66.834	1.928					18	9	2	0	0	0	1.0362	1	27218	27218		0.45452	0	1	2356100	+		33425	8631	16443	16514	38976	38976					-0.211506429719293
SYSMIVNNL	9	Unmodified	_SYSMIVNNL_					0	0	0		ENST00000469173.1_1_1:174976108-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP;ENSG00000116161|ENST00000367679|CACYBP;ENST00000473925.1_1_1:174969094-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7571899294853	2	520.757692	1039.50083	0.73128	0.00038082	-0.51473	-0.00026805	0.21655	0.00011277	520.7574893640615	56.354	0.21896	57.763	57.653	57.872	1.4099					12	6	2	0	0	0	0.12174	1	23623	23623		42.095	25.152	1	2040800			33426	1954	16444	16515	38977	38977					-0.017338960454253538
SYSMIVNNL	9	Unmodified	_SYSMIVNNL_					0	0	0		ENST00000469173.1_1_1:174976108-174977843:+|nuORF;nc|ENSG00000116161|Q9HB71-3|CACYBP;ENSG00000116161|ENST00000367679|CACYBP;ENST00000473925.1_1_1:174969094-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	ENST00000469173.1_1_1:174976108-174977843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7588989138603	2	520.757692	1039.50083	0.85921	0.00044744	-0.67934	-0.00035377	0.17987	9.3668E-05	520.7573268802016	55.828	0.18034	57.796	57.69	57.871	1.9684					9	5	2	0	0	0	0.033794	1	23408	23408		81.613	53.126	1	2442900			33427	1954	16444	16515	38978	38978					-0.017338960454253538
SYTAGYLH	8	Unmodified	_SYTAGYLH_					0	0	0			REV__NLRP12|p.V730Gfs*41|1|0.13|ENSG00000142405|chr19:53807549-53807550|-/C|frameshift_variant	REV__NLRP12|p.V730Gfs*41|1|0.13|ENSG00000142405|chr19:53807549-53807550|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2141601443291	2	456.216517	910.418482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8267	1	4.572	4.072	5.072	0.74525								0	0	0	1.0178	1	1586	1586		9.3474	0.60203	1		+		33428	10177	16445	16516	38979	38979					-0.04031050062042141
SYTAGYLH	8	Unmodified	_SYTAGYLH_					0	0	0			REV__NLRP12|p.V730Gfs*41|1|0.13|ENSG00000142405|chr19:53807549-53807550|-/C|frameshift_variant	REV__NLRP12|p.V730Gfs*41|1|0.13|ENSG00000142405|chr19:53807549-53807550|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2150756716728	2	456.216517	910.418482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0956	1	4.8408	4.3408	5.3408	0.74525								0	0	0	1.0178	1	1697	1697		9.3474	0.60203	1		+		33429	10177	16445	16516	38980	38980					-0.04031050062042141
SYTAVQKKLL	10	Unmodified	_SYTAVQKKLL_					0	0	0			REV__nc|ENSG00000239605|Q8N801-2|STPG4	REV__nc|ENSG00000239605|Q8N801-2|STPG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8446533083916	2	575.845156	1149.67576	1.3664	0.00078685	-1.6455	-0.00094757	-0.27912	-0.00016073	575.843704600643	71.038	1.4163	72.861	72.154	73.57	1.8239					89	45	3	0	0	0	0.85124	1	29850	29850		6.7232	0.99131	1	1907700	+		33430	11913	16446	16517	38981	38981					0.10690847091291289
SYTDFHIDF	9	Unmodified	_SYTDFHIDF_					0	0	0		nc|ENSG00000006459|Q6ZMT4-2|KDM7A;ENSG00000006459|ENST00000397560|KDM7A;ENST00000490635.1_1_X:54026257-54040884:-|nuORF;nc|ENSG00000172943|Q9UPP1-5|PHF8;nc|ENSG00000172943|Q9UPP1-4|PHF8;nc|ENSG00000172943|Q9UPP1-3|PHF8;ENSG00000172943|ENST00000338154|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.7520629763603	2	572.750921	1143.48729	2.923	0.0016742	0.2498	0.00014308	3.1728	0.0018172	572.750394110711	61.689	0.40679	63.106	62.927	63.333	1.4177					28	12	3	0	0	0	0.20671	2	25868	25868;25913		32.305	24.15	1	2366900			33431	508	16447	16518	38982;38983	38982					-0.07871430552995662
SYTDFHIDF	9	Unmodified	_SYTDFHIDF_					0	0	0		nc|ENSG00000006459|Q6ZMT4-2|KDM7A;ENSG00000006459|ENST00000397560|KDM7A;ENST00000490635.1_1_X:54026257-54040884:-|nuORF;nc|ENSG00000172943|Q9UPP1-5|PHF8;nc|ENSG00000172943|Q9UPP1-4|PHF8;nc|ENSG00000172943|Q9UPP1-3|PHF8;ENSG00000172943|ENST00000338154|PHF8;nc|ENSG00000172943|Q9UPP1|PHF8	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	nc|ENSG00000006459|Q6ZMT4-2|KDM7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7523071169853	2	572.750921	1143.48729	2.3706	0.0013578	1.1768	0.00067399	3.5473	0.0020317	572.7510051257406	61.202	0.30917	63.167	62.973	63.282	1.9653					25	9	3	0	0	0	0.083604	2	25654	25654;25703		54.774	38.624	1	2330300			33432	508	16447	16518	38984;38985	38984					-0.07871430552995662
SYTLNRQPHF	10	Unmodified	_SYTLNRQPHF_					0	0	0		tr|A0A7D6VXT9|A0A7D6VXT9_9CLOTOleatehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14060PE=4SV=1	tr|A0A7D6VXT9|A0A7D6VXT9_9CLOTOleatehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14060PE=4SV=1	tr|A0A7D6VXT9|A0A7D6VXT9_9CLOTOleatehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14060PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.8815795779228	3	421.5474	1261.62037	0.69259	0.00029196	-2.3455	-0.00098875	-1.6529	-0.00069679	421.5462912054378	30.727	0.34107	32.01	31.843	32.184	1.2825					21	10	3	0	0	0	0.89422	1	12877	12877		2.086	0	1	1025400			33433	16990	16448	16519	38986	38986					2.4336235128430417E-05
SYTLQIIVL	9	Unmodified	_SYTLQIIVL_					0	0	0		tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3148681521416	2	525.3157	1048.61685	2.9997	0.0015758	-2.5536	-0.0013414	0.44614	0.00023437	525.3141907778775	62.896	0.86096	64.31	64.075	64.936	1.4134					76	27	4	0	0	0	0.037761	1	26458	26458		78.149	7.0158	1	23478000			33434	16776	16449	16520	38987	38987					0.09448370796940253
SYTLQIIVL	9	Unmodified	_SYTLQIIVL_					0	0	0		tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	tr|A0A7D6VPV9|A0A7D6VPV9_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_00410PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3149291872978	2	525.3157	1048.61685	3.1046	0.0016309	-2.8901	-0.0015182	0.21456	0.00011271	525.3140965603634	62.355	0.48352	64.312	64.03	64.514	1.9571					30	15	2	0	0	0	0.037761	1	26206	26206		78.149	7.0158	1	24901000			33435	16776	16449	16520	38988	38988					0.09448370796940253
SYTRLFSNF	9	Unmodified	_SYTRLFSNF_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;ENST00000490112.1_1_3:33438535-33441732:-|nuORF;ENST00000486388.5_1_3:33438291-33450199:-|nuORF	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7835571169853	2	567.782556	1133.55056	1.0775	0.00061179	0.40868	0.00023204	1.4862	0.00084383	567.7827316589345	52.393	0.43325	53.789	53.62	54.053	1.3966					42	13	4	0	0	0	4.1713E-05	4	21917	21892;21917;21961;22001		155.95	97.275	1	19987000			33436	3360	16450	16521	38989;38990;38991;38992	38990					-0.010874450451183293
SYTRLFSNF	9	Unmodified	_SYTRLFSNF_					0	0	0		nc|ENSG00000153560|Q9NZI7-4|UBP1;ENSG00000153560|ENST00000283629|UBP1;ENST00000490112.1_1_3:33438535-33441732:-|nuORF;ENST00000486388.5_1_3:33438291-33450199:-|nuORF	nc|ENSG00000153560|Q9NZI7-4|UBP1	nc|ENSG00000153560|Q9NZI7-4|UBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.7834350466728	2	567.782556	1133.55056	1.1295	0.00064132	0.03231	1.8345E-05	1.1618	0.00065966	567.7826082821495	51.842	0.49318	53.815	53.585	54.078	1.9722					28	15	2	0	0	0	0.0013614	3	21702	21702;21753;21796		132.38	82.447	1	21435000			33437	3360	16450	16521	38993;38994;38995	38993					-0.010874450451183293
SYTSGLETL	9	Unmodified	_SYTSGLETL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP;DSP|p.R1725Qfs*9|1|0.06|ENSG00000096696|chr6:7581363-7581364|-/A|frameshift_variant;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	970.4728881716728	1	970.472768	969.465492	1.7764	0.0017239	1.7517	0.0016999	3.5281	0.0034239	970.4742487982869	43.111	0.1816	45.032	44.929	45.111	1.9211					7	5	2	0	0	0	0.46905	1	18085	18085		16.942	5.302	1	557880			33438	1196;431	16451	16522	38996	38996					-0.020462353015659573
SYTSGLETL	9	Unmodified	_SYTSGLETL_					0	0	0		nc|ENSG00000096696|P15924-2|DSP;nc|ENSG00000096696|P15924-3|DSP;ENSG00000096696|ENST00000379802|DSP;DSP|p.R1725Qfs*9|1|0.06|ENSG00000096696|chr6:7581363-7581364|-/A|frameshift_variant;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP;DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	nc|ENSG00000096696|P15924-2|DSP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	970.472768	969.465492	1.6319	0.0015837	-0.19157	-0.00018591	1.4404	0.0013978	970.4725713731758	43.702	0.24532	45.056	44.886	45.132	1.3536	0.011673	-0.00077705	NaN	16.942	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520160			33439	1196;431	16451	16522							-0.020462353015659573
SYTSGPGSR	9	Unmodified	_SYTSGPGSR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2151367068291	2	456.214506	910.414459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3081	1	3.0565	2.5565	3.5565	0.7484								0	0	0	0.37238	1	958	958		11.495	2.1473	1			+	33440	343	16452	16523	38997	38997					-0.044331395557492215
SYTSGPGSR	9	Unmodified	_SYTSGPGSR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000550170.5_1_12:53294858-53298765:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2140991091728	2	456.214506	910.414459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2454	1	4.9906	4.4906	5.4906	0.74525								0	0	0	0.37238	1	1758	1758		11.495	2.1473	1			+	33441	343	16452	16523	38998	38998					-0.044331395557492215
SYTVVFRDI	9	Unmodified	_SYTVVFRDI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2190429568291	2	550.292756	1098.57096	4.6271	0.0025463	0.4347	0.00023921	5.0618	0.0027855	550.2928997212052	89.132	0.41228	90.537	90.264	90.677	1.4045					30	12	3	0	0	0	0.11851	1	37459	37459		3.9444	2.2918	1	2239700			33442	3010	16453	16524	38999	38999					0.025617256147143053
SYVALFILP	9	Unmodified	_SYVALFILP_					0	0	0			REV__ENST00000358151.8_1_9:114289573-114289636:+|nuORF	REV__ENST00000358151.8_1_9:114289573-114289636:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.8016235232353	2	511.799686	1021.58482	4.4984	0.0023023	2.3142	0.0011844	6.8126	0.0034867	511.80082411466566	94.069	0.50248	94.81	94.51	95.013	0.74124					52	15	4	0	0	0	0.37357	1	39498	39498		21.747	0	1	3625400	+		33443	12567	16454	16525	39000	39000					0.07489003113801118
SYVAPFSSLF	10	Unmodified	_SYVAPFSSLF_					0	0	0			REV__ENST00000476846.1_7:111503332-111846439:-|nuORF	REV__ENST00000476846.1_7:111503332-111846439:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2814208865166	2	559.281857	1116.54916	1.9058	0.0010659	-0.58643	-0.00032798	1.3194	0.00073791	559.2818717740415	67.551	0.3107	68.929	68.724	69.035	1.3778					24	9	3	0	0	0	0.62746	1	28322	28322		21.747	0	1	1919400	+		33444	8456	16455	16526	39001	39001					-0.004450791338740601
SYVGSLYVW	9	Unmodified	_SYVGSLYVW_					0	0	0		ENST00000534822.1_1_11:66611010-66611365:+|nuORF;ENST00000533277.5_1_11:66610899-66611226:+|nuORF;RCE1|p.S82Tfs*59|1|0.91|ENSG00000173653|chr11:66843810-66843811|CA/-|frameshift_variant;ENSG00000173653|ENST00000309657|RCE1	ENST00000534822.1_1_11:66611010-66611365:+|nuORF	ENST00000534822.1_1_11:66611010-66611365:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1073.539965808392	1	1073.53022	1072.52295	3.7161	0.0039894	2.4494	0.0026295	6.1655	0.0066188	1073.5350602104397	72.85	0.71562	74.179	73.822	74.537	1.3297					31	22	3	0	0	0	0.070055	1	30580	30580		77.984	49.497	1	2077100			33445	4294	16456	16527	39002	39002					-0.010413483053525852
SYVKIMFIL	9	Unmodified	_SYVKIMFIL_					0	0	0		ENST00000483808.1_1_3:143691750-143704756:+|nuORF	ENST00000483808.1_1_3:143691750-143704756:+|nuORF	ENST00000483808.1_1_3:143691750-143704756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3224975466728	2	557.322471	1112.63039	2.5644	0.0014292	-0.58647	-0.00032685	1.9779	0.0011023	557.3193978548413	71.08	0.50793	72.421	72.271	72.779	1.3415					27	16	3	0	0	0	0.34572	1	29806	29806		23.148	5.0134	1	2119800			33446	6845	16457	16528	39003	39003					0.07857905304558699
SYVLRSSLIL	10	Unmodified	_SYVLRSSLIL_					0	0	0			REV__DMXL2|p.P2585Lfs*7|1|0.03|ENSG00000104093|chr15:51464726-51464727|-/A|frameshift_variant	REV__DMXL2|p.P2585Lfs*7|1|0.03|ENSG00000104093|chr15:51464726-51464727|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8454467654228	2	575.845156	1149.67576	1.8957	0.0010916	-2.5732	-0.0014818	-0.67757	-0.00039018	575.8434594961253	71.537	1.542	72.879	71.924	73.467	1.3415					91	49	3	0	0	0	0.81324	1	30145	30145		10.824	3.5347	1	2591100	+		33447	8448	16458	16529	39004	39004					0.10690847091291289
SYVLRSSLIL	10	Unmodified	_SYVLRSSLIL_					0	0	0			REV__DMXL2|p.P2585Lfs*7|1|0.03|ENSG00000104093|chr15:51464726-51464727|-/A|frameshift_variant	REV__DMXL2|p.P2585Lfs*7|1|0.03|ENSG00000104093|chr15:51464726-51464727|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8442870974541	2	575.845156	1149.67576	1.3664	0.00078685	-1.6455	-0.00094757	-0.27912	-0.00016073	575.843704600643	71.038	1.4163	72.861	72.154	73.57	1.8239					89	45	3	0	0	0	0.85124	1	29801	29801		6.7232	2.7788	1	1907700	+		33448	8448	16458	16529	39005	39005					0.10690847091291289
SYVRSLPFF	9	Unmodified	_SYVRSLPFF_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2993041872978	2	558.297842	1114.58113	3.1743	0.0017722	-1.9927	-0.0011125	1.1815	0.00065965	558.2973047936475	64.466	0.92664	65.874	65.622	66.548	1.4071					81	29	4	0	0	0	0.046715	3	26999	26999;27041;27097		70.332	31.711	1	16934000			33449	4126	16459	16530	39006;39007;39008	39006					0.028423333399587136
SYVRSLPFF	9	Unmodified	_SYVRSLPFF_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3000366091728	2	558.297842	1114.58113	2.8578	0.0015955	-1.4385	-0.00080312	1.4193	0.0007924	558.297855053207	63.914	0.62047	65.842	65.457	66.077	1.928					49	19	4	0	0	0	0.050451	3	26793	26793;26844;26883		67.838	31.711	1	15477000			33450	4126	16459	16530	39009;39010;39011	39009					0.028423333399587136
SYVRSLPFF	9	Unmodified	_SYVRSLPFF_					0	0	0		ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	ENSG00000170043|ENST00000303731|TRAPPC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	558.297842	1114.58113	2.3651	0.0013204	-4.1599	-0.0023225	-1.7949	-0.0010021	558.2951828020205	64.29	0.44224	66.218	66.045	66.487	1.928	0.17219	-0.0016491	NaN	70.332	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2501400			33451	4126	16459	16530							0.028423333399587136
SYVTTFTSL	9	Unmodified	_SYVTTFTSL_					0	0	0			REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7607299685478	2	509.758215	1017.50188	2.7179	0.0013855	1.3093	0.00066743	4.0272	0.0020529	509.7590292165407	70.004	0.44858	71.842	71.624	72.073	1.8378					25	13	3	0	0	0	0.27148	1	29373	29373		26.884	0	1	1420000	+		33452	14659	16460	16531	39012	39012					-0.006173584048383418
SYVTTFTSL	9	Unmodified	_SYVTTFTSL_					0	0	0			REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	509.758215	1017.50188	3.3544	0.00171	1.9372	0.00098749	5.2916	0.0026974	509.7592902064522	70.567	0.41816	71.921	71.648	72.066	1.3536	0.039485	0.00015802	NaN	26.884	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2227400	+		33453	14659	16460	16531							-0.006173584048383418
SYVTTFTSL	9	Unmodified	_SYVTTFTSL_					0	0	0			REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	REV__sp|P16810|IR12_HCMVAUncharacterizedproteinIRL12OS=Humancytomegalovirus(strainAD169)OX=10360PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	509.758215	1017.50188	2.7179	0.0013855	1.3093	0.00066743	4.0272	0.0020529	509.7590292165407	70.004	0.44858	71.842	71.624	72.073	1.8378	-0.039485	-0.00048211	NaN	26.884	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1420000	+		33454	14659	16460	16531							-0.006173584048383418
SYYCDEHFE	9	Unmodified	_SYYCDEHFE_					0	0	0		nc|ENSG00000116785|Q02985-2|CFHR3;ENSG00000116785|ENST00000367425|CFHR3;nc|ENSG00000000971|P08603-2|CFH;ENST00000466229.5_1_1:196648727-196709933:+|nuORF;nc|ENSG00000000971|P08603|CFH;ENSG00000000971|ENST00000367429|CFH	nc|ENSG00000116785|Q02985-2|CFHR3	nc|ENSG00000116785|Q02985-2|CFHR3	MSMS	GG20161007_CRH_Patient100_A02_02	2	596.7159301638603	2	596.716221	1191.41789	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.249	1	99.329	98.829	99.829	0.080376								0	0	0	0.42693	1	41553	41553		0.52476	0	1				33455	454	16461	16532	39013	39013					-0.17016257564068837
SYYGPLNLLTF	11	Unmodified	_SYYGPLNLLTF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	644.3361694216728	2	644.334621	1286.65469	3.4195	0.0022033	-2.2016	-0.0014185	1.2179	0.00078475	644.3334332546436	96.787	0.30121	97.072	96.892	97.194	0.28442					19	9	3	0	0	0	0.0027347	1	40716	40716		118.07	66.439	1	6585600			33456	3050	16462	16533	39014	39014					0.022828369917533564
SYYGPLNLLTF	11	Unmodified	_SYYGPLNLLTF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.8414794802666	2	644.334621	1286.65469	3.1188	0.0020095	3.0369	0.0019568	6.1557	0.0039663	644.3367176317719	96.683	0.21834	96.989	96.851	97.069	0.3062					15	6	3	0	0	0	0.026828	1	40655	40655		89.401	58.132	1	6026900			33457	3050	16462	16533	39015	39015					0.022828369917533564
SYYKAQPLL	9	Unmodified	_SYYKAQPLL_					0	0	0			REV__ENSG00000257057|ENST00000542198|C11orf97	REV__ENSG00000257057|ENST00000542198|C11orf97	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8032714724541	2	541.797675	1081.5808	2.4341	0.0013188	2.7569	0.0014937	5.191	0.0028125	541.7995433454344	65.694	0.94302	67.093	66.663	67.606	1.3989					96	30	4	0	0	0	0.46905	1	27466	27466		16.942	4.4107	1	11867000	+		33458	11975	16463	16534	39016	39016					0.04326913620070627
SYYLSDELF	9	Unmodified	_SYYLSDELF_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5110656619072	3	379.509729	1135.50736	-0.052523	-1.9933E-05	3.3297	0.0012637	3.2772	0.0012437	379.5112149401738	15.05	0.38514	15.946	15.837	16.222	0.89664					19	12	3	0	0	0	0.59203	1	6333	6333		7.609	2.7119	1	1250300			33459	16516	16464	16535	39017	39017					-0.054976796130631556
TAADIFKQY	9	Unmodified	_TAADIFKQY_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7720214724541	2	528.771657	1055.52876	0.84896	0.00044891	0.36101	0.00019089	1.21	0.0006398	529.273254752204	37.624	0.3003	38.909	38.781	39.081	1.284					17	10	2	0	0	0	0.040497	2	15783	15783;15826		75.761	43.455	1	2307300			33460	1372	16465	16536	39018;39019	39018					0.00321750206330762
TAADIFKQY	9	Unmodified	_TAADIFKQY_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2754394412041	2	528.771657	1055.52876	0.90118	0.00047652	0.49279	0.00026057	1.394	0.00073709	528.771875541101	37.015	0.3074	38.832	38.688	38.995	1.8176					24	14	2	0	0	0	0.04812	2	15509	15509;15559		69.105	47.358	1	1724900			33461	1372	16465	16536	39020;39021	39020					0.00321750206330762
TAAENEFVVL	10	Unmodified	_TAAENEFVVL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q6IME9;ENSG00000170486|ENST00000293745|KRT72;CON__Q14CN4-1;nc|ENSG00000170486|Q14CN4-2|KRT72;nc|ENSG00000170486|Q14CN4-3|KRT72;ENST00000546453.1_1_12:53215658-53224087:-|nuORF;ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	CON__P08729;ENSG00000185640|ENST00000330553|KRT79	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7833740115166	2	546.782222	1091.54989	3.3712	0.0018433	-2.8387	-0.0015522	0.53251	0.00029117	546.7806504850881	60.566	0.15593	62.531	62.451	62.607	1.9653					8	4	2	0	0	0	0.44465	1	25420	25420		30.637	0	1	1084500		+	33462	345;362	16466	16537	39022	39022					0.007777155151870829
TAAFWTRLY	9	Unmodified	_TAAFWTRLY_					0	0	0		ENST00000463015.1_1_1:202977868-202984294:+|nuORF;nc|ENSG00000163444|Q8IXX5-2|TMEM183A;nc|ENSG00000224831|Q1AE95|TMEM183BP;ENSG00000163444|ENST00000367242|TMEM183A	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.7973510622978	2	564.795466	1127.57638	2.8646	0.0016179	-0.37422	-0.00021136	2.4903	0.0014065	564.7954342053033	60.259	0.52048	61.678	61.507	62.027	1.4196					48	16	4	0	0	0	0.03071	3	25285	25238;25285;25325		86.332	36.778	1	7551200			33463	3683	16467	16538	39023;39024;39025	39024					0.01769449197195172
TAAFWTRLY	9	Unmodified	_TAAFWTRLY_					0	0	0		ENST00000463015.1_1_1:202977868-202984294:+|nuORF;nc|ENSG00000163444|Q8IXX5-2|TMEM183A;nc|ENSG00000224831|Q1AE95|TMEM183BP;ENSG00000163444|ENST00000367242|TMEM183A	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	ENST00000463015.1_1_1:202977868-202984294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.7970458865166	2	564.795466	1127.57638	2.9424	0.0016618	-0.015354	-8.6717E-06	2.927	0.0016532	564.7956051432361	59.767	0.42297	61.736	61.495	61.918	1.969					43	13	4	0	0	0	0.02298	3	25080	25031;25080;25135		96.936	36.778	1	6551200			33464	3683	16467	16538	39026;39027;39028	39027					0.01769449197195172
TAAGFIHLV	9	Unmodified	_TAAGFIHLV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1;ENSG00000215262|ENST00000399881|KCNU1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.7687255740166	2	464.766178	927.517802	0.55509	0.00025799	3.4522	0.0016045	4.0073	0.0018625	464.7681291578679	50.706	0.27297	52.682	52.546	52.819	1.9753					15	8	2	0	0	0	0.070759	1	21245	21245		59.795	35.121	1	1918100			33465	3438	16468	16539	39029	39029					0.05114392622704145
TAAGFIHLV	9	Unmodified	_TAAGFIHLV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1;ENSG00000215262|ENST00000399881|KCNU1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	464.766178	927.517802	0.91296	0.00042431	3.3982	0.0015794	4.3111	0.0020037	464.76805904134625	51.394	0.24703	52.788	52.621	52.868	1.3938	0.053394	-2.8491E-05	NaN	59.795	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1750400			33466	3438	16468	16539							0.05114392622704145
TAAKKAKKIYL	11	Unmodified	_TAAKKAKKIYL_					0	0	0		tr|A0A553SP40|A0A553SP40_NIACIDNAtopoisomerase1OS=NialliacirculansOX=1397GN=topAPE=3SV=1	tr|A0A553SP40|A0A553SP40_NIACIDNAtopoisomerase1OS=NialliacirculansOX=1397GN=topAPE=3SV=1	tr|A0A553SP40|A0A553SP40_NIACIDNAtopoisomerase1OS=NialliacirculansOX=1397GN=topAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2692138552666	3	412.267574	1233.78089	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.13	1	104.13	103.63	104.63	0								0	0	0	0.63775	1	43887	43887		0.50596	0.23694	1				33467	16450	16469	16540	39030	39030					0.17335388287710884
TAALIPETAAM	11	Unmodified	_TAALIPETAAM_					0	0	0			REV__ENSG00000171222|ENST00000305978|SCAND1	REV__ENSG00000171222|ENST00000305978|SCAND1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.3198119997978	2	544.78645	1087.55835	1.8689	0.0010181	-3.567	-0.0019432	-1.6981	-0.0009251	544.7854495223868	69.03	0.21661	70.396	70.284	70.501	1.3657					11	6	2	0	0	0	0.14606	1	28961	28961		6.2058	3.903	1	1100800	+		33468	11017	16470	16541	39031	39031					0.01806946160127154
TAAYVNAIEK	10	Unmodified	_TAAYVNAIEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.2911865115166	2	540.290214	1078.56587	0.79915	0.00043177	0.20462	0.00011056	1.0038	0.00054233	540.2902019805526	22.913	0.26678	22.913	22.78	23.047	0					22	8	4	0	0	0	0.20739	2	9526	9526;9583		48.073	28.711	1	5316400			33469	3217	16471	16542	39032;39033	39032					0.029734217520854145
TAAYVNAIEK	10	Unmodified	_TAAYVNAIEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.2889892458916	2	540.290214	1078.56587	0.75785	0.00040946	-0.28606	-0.00015455	0.47179	0.0002549	540.290142544574	22.758	0.26915	22.991	22.86	23.129	0.23306					15	8	2	0	0	0	0.19379	1	9485	9485		49.742	24.751	1	1428500			33470	3217	16471	16542	39034	39034					0.029734217520854145
TAAYVNAIEK	10	Unmodified	_TAAYVNAIEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2912475466728	2	540.290214	1078.56587	1.1518	0.00062229	-0.32232	-0.00017415	0.82944	0.00044814	540.2902688159264	21.846	0.20888	23.023	22.901	23.11	1.177					13	6	3	0	0	0	0.48563	1	9130	9130		28.234	15.191	1	747430			33471	3217	16471	16542	39035	39035					0.029734217520854145
TAAYVNAIEK	10	Unmodified	_TAAYVNAIEK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2915527224541	2	540.290214	1078.56587	0.55763	0.00030128	0.32592	0.00017609	0.88355	0.00047737	540.2902373933765	21.46	0.21048	23.076	22.99	23.2	1.6158					11	6	2	0	0	0	0.58255	1	8953	8953		23.801	12.306	1	470460			33472	3217	16471	16542	39036	39036					0.029734217520854145
TADGAHFEL	9	Unmodified	_TADGAHFEL_					0	0	0		ENST00000546538.1_1_19:16643407-16652813:-|nuORF;ENSG00000085872|ENST00000546361|CHERP	ENST00000546538.1_1_19:16643407-16652813:-|nuORF	ENST00000546538.1_1_19:16643407-16652813:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	480.6090576052666	2	480.724707	959.43486	0.67854	0.00032619	-0.17654	-8.4867E-05	0.502	0.00024133	480.7245650826911	32.605	0.32025	33.883	33.734	34.055	1.2782					17	10	2	0	0	0	0.11518	1	13736	13736		7.2892	0	1	2185300			33473	1067	16472	16543	39037	39037					-0.0464796889596073
TADSTIFKF	9	Unmodified	_TADSTIFKF_					0	0	0		ENST00000431677.1_1_X:100673784-100702742:+|nuORF	ENST00000431677.1_1_X:100673784-100702742:+|nuORF	ENST00000431677.1_1_X:100673784-100702742:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.8129760622978	2	515.266207	1028.51786	2.4384	0.0012564	0.35953	0.00018525	2.7979	0.0014417	515.2667332027215	49.625	0.21695	51.016	50.918	51.135	1.3911					9	6	2	0	0	0	0.11275	1	20765	20765		10.074	0	1	517710			33474	6506	16473	16544	39038	39038					0.004743478320506256
TAEAFQIVL	9	Unmodified	_TAEAFQIVL_					0	0	0		nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-3|SPNS1	nc|ENSG00000169682|Q9H2V7-3|SPNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2778808474541	2	496.276575	990.538597	3.2569	0.0016163	-0.56407	-0.00027994	2.6928	0.0013364	496.27639760878276	72.754	0.43603	74.084	73.852	74.288	1.3297					24	13	2	0	0	0	0.091139	1	30519	30519		52.268	19.963	1	1307500			33475	4105	16474	16545	39039	39039					0.04294938211717181
TAEAFQIVL	9	Unmodified	_TAEAFQIVL_					0	0	0		nc|ENSG00000169682|Q9H2V7-3|SPNS1;nc|ENSG00000169682|Q9H2V7-2|SPNS1;ENSG00000169682|ENST00000311008|SPNS1;ENST00000569969.5_2_16:28993554-28995617:+|nuORF;nc|ENSG00000169682|Q9H2V7-4|SPNS1	nc|ENSG00000169682|Q9H2V7-3|SPNS1	nc|ENSG00000169682|Q9H2V7-3|SPNS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2777587771416	2	496.276575	990.538597	2.6748	0.0013274	0.22343	0.00011088	2.8982	0.0014383	496.27659089276096	72.216	0.39839	74.026	73.831	74.229	1.8101					24	12	3	0	0	0	0.066815	1	30308	30308		61.357	21.4	1	2051200			33476	4105	16474	16545	39040	39040					0.04294938211717181
TAEEEAEEL	9	Unmodified	_TAEEEAEEL_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	340.8180419802666	3	340.81711	1019.4295	1.6745	0.00057069	1.9116	0.00065152	3.5861	0.0012222	340.8176300595371	65.357	0.43414	66.756	66.476	66.91	1.3989					29	13	3	0	0	0	0.59568	1	27400	27400		11.495	4.2055	1	1725500	+		33477	9867	16475	16546	39041	39041					-0.07943737269090434
TAEEEAEEL	9	Unmodified	_TAEEEAEEL_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	340.8180114626884	3	340.81711	1019.4295	1.3664	0.00046568	1.7988	0.00061306	3.1652	0.0010787	340.81735599196367	64.892	0.66301	66.8	66.306	66.969	1.9085					38	20	3	0	0	0	0.69306	2	27202	27202;27257		7.609	0.31972	1	1782600	+		33478	9867	16475	16546	39042;39043	39042					-0.07943737269090434
TAEEEAEEL	9	Unmodified	_TAEEEAEEL_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	340.81711	1019.4295	1.6745	0.00057069	1.9116	0.00065152	3.5861	0.0012222	340.8176300595371	65.357	0.43414	66.756	66.476	66.91	1.3989	-0.022057	3.8066E-05	NaN	11.495	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1725500	+		33479	9867	16475	16546							-0.07943737269090434
TAEEEAEEL	9	Unmodified	_TAEEEAEEL_					0	0	0			REV__nc|ENSG00000133026|P35580|MYH10	REV__nc|ENSG00000133026|P35580|MYH10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	340.81711	1019.4295	1.3664	0.00046568	1.7988	0.00061306	3.1652	0.0010787	340.81735599196367	64.892	0.66301	66.8	66.306	66.969	1.9085	0.022057	-7.73E-05	NaN	11.495	38	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1782600	+		33480	9867	16475	16546							-0.07943737269090434
TAFAVPRVL	9	Unmodified	_TAFAVPRVL_					0	0	0		ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2963744997978	2	487.295102	972.575651	2.5496	0.0012424	-0.19228	-9.3696E-05	2.3574	0.0011487	487.29497912045184	59.894	0.48333	61.314	61.053	61.536	1.4196					43	15	4	0	0	0	0.059546	3	25105	25061;25105;25156		64.236	3.9225	1	13130000			33481	7289	16476	16547	39044;39045;39046	39045					0.08826654548136048
TAFAVPRVL	9	Unmodified	_TAFAVPRVL_					0	0	0		ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2957946658134	2	487.295102	972.575651	2.705	0.0013181	-0.51977	-0.00025328	2.1853	0.0010649	487.29480890468454	59.364	0.41891	61.333	61.131	61.55	1.969					37	13	4	0	0	0	0.066815	3	24908	24862;24908;24961		61.357	2.1627	1	10662000			33482	7289	16476	16547	39047;39048;39049	39048					0.08826654548136048
TAFNLQAFEGK	11	Unmodified	_TAFNLQAFEGK_					0	0	0		ENST00000490844.1_1_10:50943276-50946169:-|nuORF;nc|ENSG00000197444|Q9ULD0-3|OGDHL;nc|ENSG00000197444|Q9ULD0-2|OGDHL;ENSG00000197444|ENST00000374103|OGDHL	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.2116577029228	3	409.211906	1224.61389	0.54114	0.00022144	-2.8027	-0.0011469	-2.2616	-0.00092547	409.2108604457665	15.972	0.27702	16.102	15.963	16.24	0.13022					22	8	3	0	0	0	0.80586	1	6615	6615		8.7518	0.30748	1	3131600			33483	5007	16477	16548	39050	39050					0.010564956721054841
TAFNLQAFEGK	11	Unmodified	_TAFNLQAFEGK_					0	0	0		ENST00000490844.1_1_10:50943276-50946169:-|nuORF;nc|ENSG00000197444|Q9ULD0-3|OGDHL;nc|ENSG00000197444|Q9ULD0-2|OGDHL;ENSG00000197444|ENST00000374103|OGDHL	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	ENST00000490844.1_1_10:50943276-50946169:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.2115051150322	3	409.211906	1224.61389	-0.08716	-3.5667E-05	-2.7923	-0.0011427	-2.8795	-0.0011783	409.2108062822984	15.405	0.21692	16.231	16.076	16.293	0.82643					14	6	3	0	0	0	0.88359	1	6381	6381		5.8681	0	1	2090900			33484	5007	16477	16548	39051	39051					0.010564956721054841
TAFPALLGLL	10	Unmodified	_TAFPALLGLL_					0	0	0			REV__ENSG00000115902|ENST00000234256|SLC1A4	REV__ENSG00000115902|ENST00000234256|SLC1A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3137695193291	2	508.312961	1014.61137	3.0717	0.0015614	-3.7427	-0.0019025	-0.67099	-0.00034107	508.3115630684629	50.206	0.35025	51.597	51.387	51.737	1.3911					23	10	3	0	0	0	0.18471	1	20970	20970		50.855	1.3278	1	3857500	+		33485	9460	16478	16549	39052	39052					0.10464692005132292
TAFPFQVEV	9	Unmodified	_TAFPFQVEV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000609587.1_1_18:2728435-2728615:+|nuORF;ENST00000584897.5_1_18:2726458-2784452:+|nuORF	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1037.531665027142	1	1037.53022	1036.52295	1.8783	0.0019488	0.88792	0.00092125	2.7663	0.0028701	1037.5303321885992	75.909	0.36536	77.203	77.006	77.371	1.2938					23	11	3	0	0	0	0.033102	1	31844	31844		82.529	36.508	1	3255000			33486	1358	16479	16550	39053	39053					0.006146516946728298
TAFPFQVEV	9	Unmodified	_TAFPFQVEV_					0	0	0		nc|ENSG00000101596|A6NHR9-2|SMCHD1;ENSG00000101596|ENST00000320876|SMCHD1;ENST00000609587.1_1_18:2728435-2728615:+|nuORF;ENST00000584897.5_1_18:2726458-2784452:+|nuORF	nc|ENSG00000101596|A6NHR9-2|SMCHD1	nc|ENSG00000101596|A6NHR9-2|SMCHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1037.534350574017	1	1037.53022	1036.52295	3.6345	0.0037709	0.62466	0.0006481	4.2592	0.004419	1037.5296718053612	75.418	0.36836	77.199	77.009	77.377	1.7817					25	11	3	0	0	0	0.015029	1	31623	31623		103.35	48.58	1	2821100			33487	1358	16479	16550	39054	39054					0.006146516946728298
TAFPKPLLT	9	Unmodified	_TAFPKPLLT_					0	0	0		ENST00000572684.1_1_17:1944307-1944574:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572684.1_1_17:1944307-1944574:+|nuORF	ENST00000572684.1_1_17:1944307-1944574:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	493.7719909548759	2	494.29731	986.580068	1.9312	0.00095457	2.0786	0.0010275	4.0098	0.001982	494.2990600419646	42.174	0.31683	43.514	43.35	43.667	1.3399					19	9	3	0	0	0	0.078703	1	17692	17692		36.506	19.393	1	1025300			33488	1655	16480	16551	39055	39055					0.08624118971033568
TAFPKPLLT	9	Unmodified	_TAFPKPLLT_					0	0	0		ENST00000572684.1_1_17:1944307-1944574:+|nuORF;nc|ENSG00000108963|Q9BZG8-2|DPH1;ENSG00000108963|ENST00000263083|DPH1;nc|ENSG00000108963|Q9BZG8-1|DPH1	ENST00000572684.1_1_17:1944307-1944574:+|nuORF	ENST00000572684.1_1_17:1944307-1944574:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.7721130251884	2	494.29731	986.580068	1.8571	0.00091794	2.2181	0.0010964	4.0752	0.0020144	494.29817323843645	41.669	0.25702	43.562	43.413	43.67	1.8927					16	7	3	0	0	0	0.080611	1	17471	17471		27.629	10.687	1	1281100			33489	1655	16480	16551	39056	39056					0.08624118971033568
TAFSRLILI	9	Unmodified	_TAFSRLILI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3256713747978	2	517.32386	1032.63317	2.4172	0.0012505	0.78556	0.00040639	3.2028	0.0016569	517.3246172694345	68.522	0.52449	69.887	69.662	70.187	1.3657					45	16	4	0	0	0	0.056421	2	28738	28738;28785		65.474	19.774	1	7162300			33490	4323	16481	16552	39057;39058	39057					0.11815496753729349
TAFSRLILI	9	Unmodified	_TAFSRLILI_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3258544802666	2	517.32386	1032.63317	2.3044	0.0011921	0.44363	0.0002295	2.748	0.0014216	517.3245194659396	67.912	0.55458	69.782	69.519	70.073	1.87					42	17	3	0	0	0	0.093705	1	28459	28459		51.415	9.3207	1	5647400			33491	4323	16481	16552	39059	39059					0.11815496753729349
TAFSRLILIL	10	Unmodified	_TAFSRLILIL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8669311404228	2	573.865892	1145.71723	1.6855	0.00096726	-0.19096	-0.00010959	1.4945	0.00085767	573.8656622463504	83.586	0.5041	84.773	84.579	85.083	1.1879					38	15	3	0	0	0	0.10428	2	35088	35046;35088		63.227	19.369	1	7266600			33492	4323	16482	16553	39060;39061	39061					0.15020027850619044
TAFSRLILIL	10	Unmodified	_TAFSRLILIL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PITPNA-PRPF8|1|fusion	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8670532107353	2	573.865892	1145.71723	2.226	0.0012774	-1.2246	-0.00070275	1.0015	0.0005747	573.8649528745411	83.016	0.56261	84.653	84.447	85.01	1.6379					37	17	3	0	0	0	0.2241	2	34865	34816;34865		46.022	13.717	1	9194900			33493	4323	16482	16553	39062;39063	39063					0.15020027850619044
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	321.1554138064384	2	321.15372	640.292888	-1.2373	-0.00039736	-0.50851	-0.00016331	-1.7458	-0.00056067	321.15525001724666	86.815	0.61367	86.815	86.459	87.072	0					116	23	6	0	0	0	0.89198	4	36088	36088;36205;36263;36340		0	0	1	159970000	+		33494	13374	16483	16554	39064;39065;39066;39067	39064					-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	321.1551391482353	2	321.15372	640.292888	1.9187	0.00061619	-3.0764	-0.00098799	-1.1577	-0.0003718	321.1543541586865	86.562	0.71281	86.806	86.483	87.195	0.24386					132	27	6	0	0	0	0.89198	4	36135	36135;36217;36276;36336		0	0	1	125410000	+		33495	13374	16483	16554	39068;39069;39070;39071	39068					-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	321.1550475955009	2	321.15372	640.292888	1.9187	0.00061619	-3.0764	-0.00098799	-1.1577	-0.0003718	321.1543541586865	86.562	0.71281	86.806	86.483	87.195	0.24386					132	27	6	0	0	0	2.3239	1	36402	36402		0	0	1	125410000	+		33496	13374	16483	16554	39072	39072					-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	321.1551391482353	2	321.15372	640.292888	2.348	0.00075406	-2.9855	-0.00095881	-0.63756	-0.00020475	321.1542914502027	84.907	1.204	86.504	86.311	87.515	1.5962					150	48	6	0	0	0	0.89198	8	35580	35580;35632;35684;35754;35847;35912;35999;36131		0	0	1	61272000	+		33497	13374	16483	16554	39073;39074;39075;39076;39077;39078;39079;39080	39073					-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	321.1561157107353	2	321.15372	640.292888	3.5522	0.0011408	-2.5039	-0.00080415	1.0482	0.00033664	321.15465570982013	86.288	1.0899	87.835	87.512	88.602	1.547					144	38	6	0	0	0	0.89198	1	36610	36610		0	0	1	44648000	+		33498	13374	16483	16554	39081	39081					-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	321.15372	640.292888	-1.2373	-0.00039736	-0.50851	-0.00016331	-1.7458	-0.00056067	321.15525001724666	86.815	0.61367	86.815	86.459	87.072	0	0.10702	0.0012443	NaN	0	116	23	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	159970000	+		33499	13374	16483	16554							-0.04164717127628137
TAGGAAGH	8	Unmodified	_TAGGAAGH_					0	0	0			REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	REV__ENST00000482862.1_1_7:104909300-105029811:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	321.15372	640.292888	2.348	0.00075406	-2.9855	-0.00095881	-0.63756	-0.00020475	321.1542914502027	84.907	1.204	86.504	86.311	87.515	1.5962	-0.20452	-0.00034671	NaN	0	150	48	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61272000	+		33500	13374	16483	16554							-0.04164717127628137
TAGGTTLIL	9	Unmodified	_TAGGTTLIL_					0	0	0		nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000172845|Q02447-2|SP3;ENSG00000172845|ENST00000310015|SP3;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-5|SP3	nc|ENSG00000172845|Q02447-6|SP3	nc|ENSG00000172845|Q02447-6|SP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	846.4951049685478	1	846.49311	845.485833	1.8931	0.0016025	-0.0078618	-6.6549E-06	1.8852	0.0015958	846.493279250402	49.573	0.36963	50.964	50.765	51.135	1.3911					21	11	2	0	0	0	0.076627	1	20722	20722		57.471	6.6163	1	2014400			33501	4256	16484	16555	39082	39082					0.056909801489041456
TAGGTTLIL	9	Unmodified	_TAGGTTLIL_					0	0	0		nc|ENSG00000172845|Q02447-6|SP3;nc|ENSG00000172845|Q02447-2|SP3;ENSG00000172845|ENST00000310015|SP3;ENST00000465379.1_1_2:174774671-174778005:-|nuORF;nc|ENSG00000172845|Q02447-4|SP3;nc|ENSG00000172845|Q02447-3|SP3;nc|ENSG00000172845|Q02447-5|SP3	nc|ENSG00000172845|Q02447-6|SP3	nc|ENSG00000172845|Q02447-6|SP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	846.4962646365166	1	846.49311	845.485833	1.5967	0.0013516	-0.85911	-0.00072723	0.73758	0.00062435	846.4929022698101	48.991	0.39977	50.969	50.761	51.161	1.9772					23	12	3	0	0	0	0.076627	1	20503	20503		57.471	1.2943	1	1658000			33502	4256	16484	16555	39083	39083					0.056909801489041456
TAIGDFLSL	9	Unmodified	_TAIGDFLSL_					0	0	0			REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	REV__nc|ENSG00000088305|Q9UBC3-2|DNMT3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	936.5059692263603	1	936.503674	935.496398	2.3622	0.0022122	0.74547	0.00069814	3.1077	0.0029104	936.504243665469	84.699	0.31911	84.699	84.526	84.845	0					20	9	3	0	0	0	0.083604	2	35313	35268;35313		54.774	0	1	1474100	+		33503	8873	16485	16556	39084;39085	39085					0.026069628033383196
TAIRGAIIL	9	Unmodified	_TAIRGAIIL_					0	0	0		ENST00000527871.5_1_16:2012676-2013018:-|nuORF;ENST00000479476.1_1_18:68097766-68098228:+|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000533161.5_1_16:2012676-2014626:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENSG00000140988|ENST00000343262|RPS2	ENST00000527871.5_1_16:2012676-2013018:-|nuORF	ENST00000527871.5_1_16:2012676-2013018:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.3042480349541	2	464.302927	926.591301	1.8052	0.00083814	0.81725	0.00037945	2.6224	0.0012176	464.3034370859166	43.015	0.37517	44.355	44.17	44.546	1.3399					22	11	3	0	0	0	0.20244	1	18027	18027		32.786	0.4802	1	2914000			33504	2943	16486	16557	39086	39086					0.125069410651804
TAIRGAIIL	9	Unmodified	_TAIRGAIIL_					0	0	0		ENST00000527871.5_1_16:2012676-2013018:-|nuORF;ENST00000479476.1_1_18:68097766-68098228:+|nuORF;ENST00000494359.1_1_11:17250107-17250695:+|nuORF;ENST00000397318.4_1_X:40794237-40794825:-|nuORF;ENST00000533161.5_1_16:2012676-2014626:-|nuORF;ENST00000533872.5_1_16:2012101-2013018:-|nuORF;ENST00000438210.1_1_1:40428398-40429073:+|nuORF;ENST00000532746.5_2_16:2012101-2013785:-|nuORF;ENSG00000140988|ENST00000343262|RPS2	ENST00000527871.5_1_16:2012676-2013018:-|nuORF	ENST00000527871.5_1_16:2012676-2013018:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	464.302927	926.591301	2.0245	0.00093996	-0.087471	-4.0613E-05	1.937	0.00089935	464.3029352934086	42.416	0.2817	44.337	44.165	44.446	1.9211	-0.009031	-0.00042201	NaN	32.786	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3014800			33505	2943	16486	16557							0.125069410651804
TAIRSGLELL	10	Unmodified	_TAIRSGLELL_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8254272341728	2	536.821681	1071.62881	2.8272	0.0015177	1.1245	0.00060367	3.9517	0.0021214	536.8222483376798	50.31	0.37791	51.702	51.452	51.829	1.392					26	11	3	0	0	0	0.25434	1	21035	21035		42.312	7.3804	1	2506000			33506	2143	16487	16558	39087	39087					0.09585987540140195
TAIRSGLELL	10	Unmodified	_TAIRSGLELL_					0	0	0		ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	ENSG00000121892|ENST00000303538|PDS5A	MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8265869021416	2	536.821681	1071.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.692	1	51.669	51.169	52.169	1.9772								0	0	0	0.25054	1	20813	20813		35.612	7.1177	1				33507	2143	16487	16558	39088	39088					0.09585987540140195
TAISLFYEL	9	Unmodified	_TAISLFYEL_					0	0	0		ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7853881716728	2	528.784233	1055.55391	3.3626	0.0017781	-1.3241	-0.00070015	2.0385	0.0010779	528.7837615488144	86.412	0.42093	87.539	87.273	87.694	1.1265					21	16	2	0	0	0	0.09539	1	36423	36423		50.855	22.368	1	4576100			33508	3983	16488	16559	39089	39089					0.0283580500890821
TAKKKKKKK	9	Unmodified	_TAKKKKKKK_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|43|1|sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|43|1|sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|43|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3913452029228	2	544.387326	1086.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.1	1	100.28	99.778	100.78	0.18047								0	0	0	0.42693	1	42126	42126		0	0	1				33509	7767	16489	16560	39090	39090					0.22018842698707886
TAKLAVIW	8	Unmodified	_TAKLAVIW_					0	0	0		ENSG00000170775|ENST00000303921|GPR37	ENSG00000170775|ENST00000303921|GPR37	ENSG00000170775|ENST00000303921|GPR37	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1884338259697	3	301.188373	900.543289	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.833	1	14.559	14.059	15.059	0.72639								0	0	0	1.0178	1	5745	5745		0.45834	0	1				33510	4160	16490	16561	39091	39091					0.08903867145136246
TAKMPTTP	8	Unmodified	_TAKMPTTP_					0	0	0		TBC1D22A-POLDIP3|1|fusion;nc|ENSG00000054611|Q8WUA7-2|TBC1D22A;ENSG00000054611|ENST00000337137|TBC1D22A	TBC1D22A-POLDIP3|1|fusion	TBC1D22A-POLDIP3|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	846.4427978396416	1	846.438966	845.431689	2.7826	0.0023553	2.1065	0.001783	4.889	0.0041383	846.4406050740415	104.81	0.13101	104.86	104.78	104.91	0.056801					23	6	5	0	0	0	0.88587	1	44268	44268		5.2307	0.47466	1	1799099999.9999998			33511	715	16491	16562	39092	39092					0.0027906472569156904
TAKRKLEL	8	Unmodified	_TAKRKLEL_					0	0	0			REV__tr|A0A553SJ53|A0A553SJ53_NIACITransketolaseOS=NialliacirculansOX=1397GN=CEQ21_16140PE=4SV=1	REV__tr|A0A553SJ53|A0A553SJ53_NIACITransketolaseOS=NialliacirculansOX=1397GN=CEQ21_16140PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	320.2064697146416	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.626	1	53.598	53.098	54.098	1.9722								0	0	0	1.0178	1	21633	21633		1.4819	0	1		+		33512	14883	16492	16563	39093	39093					0.11662039576845018
TALGDIFSI	9	Unmodified	_TALGDIFSI_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.5091430544853	1	936.503674	935.496398	2.0946	0.0019616	-0.97619	-0.00091421	1.1184	0.0010474	936.503584515255	83.453	0.28388	84.641	84.484	84.767	1.1879					18	8	3	0	0	0	0.033794	1	35003	35003		81.613	0	1	3349200	+		33513	10496	16493	16564	39094	39094					0.026069628033155823
TALGDIFSI	9	Unmodified	_TALGDIFSI_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	936.5070678591728	1	936.503674	935.496398	2.4418	0.0022868	-1.0232	-0.00095825	1.4186	0.0013285	936.5029830190564	83.014	0.28114	84.652	84.509	84.791	1.6379					14	8	2	0	0	0	0.045797	1	34855	34855		71.134	0	1	5217300	+		33514	10496	16493	16564	39095	39095					0.026069628033155823
TALGDIFSI	9	Unmodified	_TALGDIFSI_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	936.503674	935.496398	2.3622	0.0022122	0.74547	0.00069814	3.1077	0.0029104	936.504243665469	84.699	0.31911	84.699	84.526	84.845	0	0.067824	0.00041123	NaN	81.613	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1474100	+		33515	10496	16493	16564							0.026069628033155823
TALHLMCLC	9	Unmodified	_TALHLMCLC_					0	0	0		ENST00000379426.1_1_6:11575846-11576137:+|nuORF	ENST00000379426.1_1_6:11575846-11576137:+|nuORF	ENST00000379426.1_1_6:11575846-11576137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7411987185478	2	502.739934	1003.46531	1.6046	0.0008067	-0.2727	-0.0001371	1.3319	0.00066961	502.7399995770541	64.858	0.37309	66.786	66.615	66.988	1.928					21	11	2	0	0	0	0.41943	1	27197	27197		19.439	0.18201	1	2998100			33516	6211	16494	16565	39096	39096					-0.03627973098411985
TALQRIIL	8	Unmodified	_TALQRIIL_					0	0	0			REV__tr|A0A7D6VRY6|A0A7D6VRY6_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07490PE=4SV=1	REV__tr|A0A7D6VRY6|A0A7D6VRY6_9CLOTTranscriptionantiterminatorOS=ClostridiumintestinaleOX=36845GN=HZF06_07490PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.3041259646416	2	464.302927	926.591301	2.0245	0.00093996	-0.087471	-4.0613E-05	1.937	0.00089935	464.3029352934086	42.416	0.2817	44.337	44.165	44.446	1.9211					15	8	2	0	0	0	0.60362	1	17753	17753		39.957	0	1	3014800	+		33517	15429	16495	16566	39097	39097					0.125069410651804
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	982.4943115115166	1	982.491395	981.484119	3.6422	0.0035785	-1.4071	-0.0013825	2.2351	0.002196	982.4902660689296	65.341	0.49663	66.74	66.476	66.973	1.3989					42	15	3	0	0	0	0.031324	4	27378	27334;27378;27417;27458		85.357	24.967	1	26183000			33518	3501	16496	16567	39098;39099;39100;39101	39099					-0.007363969313587404
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7505676150322	2	491.749336	981.484119	2.9602	0.0014557	-0.56528	-0.00027798	2.3949	0.0011777	491.7492147641416	65.28	0.70895	66.679	66.443	67.152	1.3989					48	22	3	0	0	0	0.051699	3	27354	27354;27404;27444		67.344	20.423	1	21354000			33519	3501	16496	16567	39102;39103;39104	39102					-0.007363969313587404
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	982.4916869997978	1	982.491395	981.484119	2.0333	0.0019977	-0.77455	-0.00076099	1.2588	0.0012368	982.490865182382	64.892	0.59483	66.8	66.531	67.126	1.9085					43	18	3	0	0	0	0.031324	4	27165	27165;27207;27246;27290		85.357	24.967	1	21323000			33520	3501	16496	16567	39105;39106;39107;39108	39105					-0.007363969313587404
TAMDVVYAL	9	Unmodified	_TAMDVVYAL_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7501403689384	2	491.749336	981.484119	1.9893	0.00097825	-0.75802	-0.00037276	1.2313	0.0006055	491.7491627853109	64.858	0.65598	66.786	66.551	67.207	1.928					48	20	3	0	0	0	0.03795	3	27233	27185;27233;27277		77.984	23.795	1	32017000			33521	3501	16496	16567	39109;39110;39111	39110					-0.007363969313587404
TAMDVVYAL	9	Oxidation (M)	_TAM(Oxidation (M))DVVYAL_		TAM(1)DVVYAL		TAM(48)DVVYAL	0	0	1		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7479736208916	2	499.746793	997.479033	1.8399	0.00091947	-0.051202	-2.5588E-05	1.7887	0.00089388	499.7469030558223	48.549	0.27887	50.527	50.359	50.637	1.9772					20	8	3	0	0	0	0.10294	1	20318	20318		48.346	18.121	1	2233000			33522	3501	16496	16568	39112	39112		60			-0.019807007939675714
TAMETLINV	9	Unmodified	_TAMETLINV_					0	0	0		ENSG00000160678|ENST00000292169|S100A1	ENSG00000160678|ENST00000292169|S100A1	ENSG00000160678|ENST00000292169|S100A1	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2619811892509	2	496.260068	990.505582	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.265	1	61.234	60.734	61.734	1.969								0	0	0	0.061573	1	24863	24863		42.095	18.946	1				33523	3566	16497	16569	39113	39113					0.009949880973749714
TAMKSTSGKSS	11	Unmodified	_TAMKSTSGKSS_					0	0	0			REV__ENST00000233813.4_1_2:217541231-217541477:-|nuORF	REV__ENST00000233813.4_1_2:217541231-217541477:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	362.1816284060478	3	362.181618	1083.52302	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.83	110.33	111.33	0.047043								0	0	0	0.63775	1	47781	47781		0	0	1		+		33524	12111	16498	16570	39114	39114					-0.015397163676198033
TAPEEIVPV	9	Unmodified	_TAPEEIVPV_					0	0	0			REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	477.7624694705009	2	477.760758	953.506963	3.5948	0.0017175	-0.97554	-0.00046608	2.6193	0.0012514	477.76055017041807	86.422	0.54834	87.549	87.439	87.987	1.1265					52	20	4	0	0	0	0.37357	1	36418	36418		21.747	0	1	12840000	+		33525	15202	16499	16571	39115	39115					0.028349454577551114
TAPEEIVPV	9	Unmodified	_TAPEEIVPV_					0	0	0			REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	477.760758	953.506963	2.9249	0.0013974	0.77732	0.00037137	3.7022	0.0017688	477.76135215618405	87.603	0.84116	87.603	87.278	88.119	0	0.039021	0.0010957	NaN	21.747	77	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4608100	+		33526	15202	16499	16571							0.028349454577551114
TAPEEIVPV	9	Unmodified	_TAPEEIVPV_					0	0	0			REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	REV__tr|A0A553SSE7|A0A553SSE7_NIACIBacterialIgdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02835PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	477.760758	953.506963	3.928	0.0018766	-1.5068	-0.0007199	2.4212	0.0011567	477.7599613497459	86.019	0.46745	87.566	87.49	87.957	1.547	0.0016323	-0.0010868	NaN	21.747	30	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6879000	+		33527	15202	16499	16571							0.028349454577551114
TAQENGIYR	9	Unmodified	_TAQENGIYR_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF	nc|ENSG00000124508|Q8WVV5-2|BTN2A2	nc|ENSG00000124508|Q8WVV5-2|BTN2A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2606078982353	2	526.261988	1050.50942	0.73735	0.00038804	-0.70416	-0.00037057	0.033191	1.7467E-05	526.2617094389869	14.766	0.34074	14.766	14.596	14.936	0					18	10	2	0	0	0	0.35391	1	6148	6148		22.736	3.3743	1	856290			33528	2230	16500	16572	39116	39116					-0.01381206084556652
TAQENGIYR	9	Unmodified	_TAQENGIYR_					0	0	0		nc|ENSG00000124508|Q8WVV5-2|BTN2A2;ENSG00000124508|ENST00000356709|BTN2A2;nc|ENSG00000124508|Q8WVV5-3|BTN2A2;ENST00000482636.1_1_6:26384034-26385742:+|nuORF	nc|ENSG00000124508|Q8WVV5-2|BTN2A2	nc|ENSG00000124508|Q8WVV5-2|BTN2A2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	526.261988	1050.50942	0.4688	0.00024671	0.13359	7.0304E-05	0.60239	0.00031702	526.2620136732781	14.736	0.31099	14.849	14.697	15.008	0.11295	0.041422	0.00044669	NaN	22.736	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	631690			33529	2230	16500	16572							-0.01381206084556652
TAQTLVRIL	9	Unmodified	_TAQTLVRIL_					0	0	0		ENSG00000143621|ENST00000361891|ILF2;ENST00000480213.1_1_1:153634874-153635650:-|nuORF	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8199951052666	2	507.818941	1013.62333	2.0291	0.0010304	-0.24066	-0.00012221	1.7885	0.00090822	507.81883389513274	46.383	0.62189	47.759	47.493	48.115	1.3751					55	19	4	0	0	0	0.00032631	3	19403	19403;19455;19514		136.39	34.792	1	37196000			33530	3042	16501	16573	39117;39118;39119	39117					0.1170630874833023
TAQTLVRIL	9	Unmodified	_TAQTLVRIL_					0	0	0		ENSG00000143621|ENST00000361891|ILF2;ENST00000480213.1_1_1:153634874-153635650:-|nuORF	ENSG00000143621|ENST00000361891|ILF2	ENSG00000143621|ENST00000361891|ILF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8195678591728	2	507.818941	1013.62333	1.3941	0.00070796	0.58946	0.00029934	1.9836	0.0010073	507.8192276806124	45.927	0.65171	47.897	47.631	48.283	1.9703					56	20	4	0	0	0	0.0080484	4	19266	19166;19215;19266;19306		110.55	34.792	1	30718000			33531	3042	16501	16573	39120;39121;39122;39123	39122					0.1170630874833023
TARKKKKKKKK	11	Unmodified	_TARKKKKKKKK_					0	0	0		ENST00000567998.5_1_16:28621482-28621938:-|nuORF	ENST00000567998.5_1_16:28621482-28621938:-|nuORF	ENST00000567998.5_1_16:28621482-28621938:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	686.4880248904228	2	686.485363	1370.95617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.86	1	107.02	106.52	107.52	0.15781								0	0	0	0.63775	1	45846	45846		0	0	1				33532	7367	16502	16574	39124	39124					0.2855322787256682
TARKKSTG	8	Unmodified	_TARKKSTG_					0	0	0			REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF	REV__ENST00000554879.5_1_14:71374480-71476401:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7510253787041	2	424.751059	847.487565	0.1584	6.7282E-05	0.016863	7.1628E-06	0.17527	7.4444E-05	424.75105426668466	23.603	0.27323	23.603	23.475	23.748	0					19	8	3	0	0	0	0.89181	1	9827	9827		0.6015	0	1	1554500	+		33533	13861	16503	16575	39125	39125					0.057720339575212165
TARLGRLHQV	10	Unmodified	_TARLGRLHQV_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8446533083916	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.85604	2	31129	31041;31129		6.2058	1.4498	1	9020800	+		33534	11907	16504	16576	39126;39127	39127					0.10422436476960684
TARLGRLHQV	10	Unmodified	_TARLGRLHQV_					0	0	0			REV__ENSG00000236287|ENST00000413761|ZBED5	REV__ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8446533083916	2	575.843813	1149.67307	2.4428	0.0014067	-1.0723	-0.00061749	1.3705	0.00078921	575.8429155797212	74.786	2.1061	75.11	74.169	76.275	0.32463					197	66	4	0	0	0	0.82019	1	31070	31070		10.074	2.1638	1	9924500	+		33535	11907	16504	16576	39128	39128					0.10422436476960684
TARPPWMWV	9	Unmodified	_TARPPWMWV_					0	0	0		ENST00000595585.1_1_19:51452094-51455913:-|nuORF;chr19:50952668-50952898|331|19.3|0.19|6.69|-|ENST00000594846|KLK5,KLK5;ENSG00000167754|ENST00000336334|KLK5	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2919189333916	2	572.292037	1142.56952	2.029	0.0011612	-0.73704	-0.0004218	1.292	0.00073939	572.2918236500137	67.925	1.1013	69.303	68.665	69.766	1.3778					117	35	5	0	0	0	0.093059	5	28426	28426;28473;28523;28561;28603		51.63	29.602	1	27308000			33536	232	16505	16577	39129;39130;39131;39132;39133	39129					0.003938130449569144
TARPPWMWV	9	Unmodified	_TARPPWMWV_					0	0	0		ENST00000595585.1_1_19:51452094-51455913:-|nuORF;chr19:50952668-50952898|331|19.3|0.19|6.69|-|ENST00000594846|KLK5,KLK5;ENSG00000167754|ENST00000336334|KLK5	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2927123904228	2	572.292037	1142.56952	1.3674	0.00078255	-0.69026	-0.00039503	0.67714	0.00038752	572.2919376637778	67.364	1.0776	69.234	68.627	69.704	1.87					97	34	5	0	0	0	0.037098	5	28286	28197;28247;28286;28325;28375		78.728	48.092	1	27055000			33537	232	16505	16577	39134;39135;39136;39137;39138	39136					0.003938130449569144
TARPPWMWV	9	Oxidation (M)	_TARPPWM(Oxidation (M))WV_		TARPPWM(1)WV		TARPPWM(52)WV	0	0	1		ENST00000595585.1_1_19:51452094-51455913:-|nuORF;chr19:50952668-50952898|331|19.3|0.19|6.69|-|ENST00000594846|KLK5,KLK5;ENSG00000167754|ENST00000336334|KLK5	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	ENST00000595585.1_1_19:51452094-51455913:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.2902099490166	2	580.289494	1158.56443	1.0358	0.00060105	2.0658	0.0011987	3.1015	0.0017998	580.2909504284262	56.096	1.0654	58.064	57.717	58.782	1.9684					77	34	3	0	0	0	0.093059	2	23496	23453;23496		51.63	28.524	1	5663500			33538	232	16505	16578	39139;39140	39140		1			-0.008504908176519166
TARPRLSPRL	10	Unmodified	_TARPRLSPRL_					0	0	0		ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.3318969607353	2	583.859464	1165.70437	3.9054	0.0022802	-1.0997	-0.00064204	2.8058	0.0016382	583.8587927523151	82.159	0.5672	83.371	83.099	83.666	1.2125					30	17	3	0	0	0	0.12549	1	34406	34406		2.9952	0.93549	1	1142300			33539	6961	16506	16579	39141	39141					0.1281500951106409
TARPRLSPRL	10	Unmodified	_TARPRLSPRL_					0	0	0		ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	583.859464	1165.70437	2.2884	0.0013361	-0.86666	-0.00050601	1.4217	0.00083007	583.8591925923532	83.083	0.5809	83.083	82.892	83.473	0	-0.19943	8.5487E-05	NaN	2.9952	38	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1953200			33540	6961	16506	16579							0.1281500951106409
TARPRLSPRL	10	Unmodified	_TARPRLSPRL_					0	0	0		ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	ENST00000497341.5_1_2:27477956-27478319:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	583.859464	1165.70437	3.8308	0.0022367	-1.4764	-0.00086199	2.3545	0.0013747	583.8585462149618	81.816	0.50229	83.487	83.264	83.766	1.67	0.204	-0.00062647	NaN	2.9952	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1188600			33541	6961	16506	16579							0.1281500951106409
TASDKILIV	9	Unmodified	_TASDKILIV_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2923156619072	2	480.292225	958.569897	2.1825	0.0010483	-1.2139	-0.00058301	0.96868	0.00046525	480.2914752586093	38.945	0.37439	40.241	40.038	40.413	1.2961					26	11	3	0	0	0	0.04812	1	16319	16319		69.105	10.426	1	8691100			33542	2052	16507	16580	39142	39142					0.08895511245827947
TASDKILIV	9	Unmodified	_TASDKILIV_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35;ENST00000445063.5_1_2:20113365-20153734:-|nuORF	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2927734255791	2	480.292225	958.569897	0.98932	0.00047516	0.21219	0.00010191	1.2015	0.00057708	480.29223288981075	38.357	0.37669	40.193	39.959	40.335	1.8366					28	11	3	0	0	0	0.042285	1	16069	16069		74.2	14.126	1	6572800			33543	2052	16507	16580	39143	39143					0.08895511245827947
TASDPLNRLY	10	Unmodified	_TASDPLNRLY_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|201|3|anti-sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|201|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2993652224541	2	575.29857	1148.58259	0.63768	0.00036686	0.44199	0.00025428	1.0797	0.00062114	575.2988879880763	25.164	0.23917	26.881	26.727	26.966	1.7167					14	7	3	0	0	0	0.85124	1	10506	10506		6.7232	0	1	1198700	+		33544	14196	16508	16581	39144	39144					0.014239226380595937
TASDPLNRLY	10	Unmodified	_TASDPLNRLY_					0	0	0			REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|201|3|anti-sense	REV__HERVH-int_dup4306|chr11:78081300-78085065:+|1.1939161149346706|0.1845827815547973|2.69|421.0|201|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	575.29857	1148.58259	0.63768	0.00036686	0.44199	0.00025428	1.0797	0.00062114	575.2988879880763	25.164	0.23917	26.881	26.727	26.966	1.7167	0.023634	0.00063594	NaN	6.7232	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1198700	+		33545	14196	16508	16581							0.014239226380595937
TASELLMRL	9	Unmodified	_TASELLMRL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.2895385622978	2	517.289159	1032.56377	1.098	0.00056797	1.5011	0.00077651	2.5991	0.0013445	517.2905938010034	53.509	1.0742	54.909	54.089	55.163	1.4005					53	41	2	0	0	0	0.0033884	2	22371	22318;22371		126.57	50.805	1	7505000			33546	1912	16509	16582	39145;39146	39146					0.04878669742652164
TASELLMRL	9	Unmodified	_TASELLMRL_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	ENSG00000115306|ENST00000356805|SPTBN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2893554568291	2	517.289159	1032.56377	1.1461	0.00059289	-0.20581	-0.00010646	0.94034	0.00048643	517.2899717135188	52.767	0.82802	54.74	54.138	54.966	1.9722					54	32	3	0	0	0	0.0060384	2	22148	22106;22148		118.07	48.963	1	7517900			33547	1912	16509	16582	39147;39148	39148					0.04878669742652164
TASEMILVL	9	Unmodified	_TASEMILVL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.7737304568291	2	488.772811	975.531069	2.5498	0.0012463	-2.9832	-0.0014581	-0.43332	-0.00021179	488.7724642669214	76.032	0.63359	77.326	77.097	77.731	1.2938					43	20	4	0	0	0	0.069258	2	31886	31886;31950		60.39	15.983	1	5047700			33548	3782	16510	16583	39149;39150	39149					0.04232462619779653
TASEMILVL	9	Unmodified	_TASEMILVL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	976.5406982302666	1	976.538345	975.531069	2.6061	0.0025449	0.6669	0.00065126	3.273	0.0031962	976.5382529986579	76.043	0.60204	77.337	77.097	77.699	1.2938					26	19	2	0	0	0	0.031324	2	31892	31892;31944		85.357	27.885	1	5731200			33549	3782	16510	16583	39151;39152	39151					0.04232462619779653
TASEMILVL	9	Unmodified	_TASEMILVL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	976.5419189333916	1	976.538345	975.531069	2.6431	0.002581	0.84059	0.00082087	3.4836	0.0034019	976.5390144438461	75.521	0.38983	77.303	77.103	77.493	1.7817					29	12	3	0	0	0	0.031324	2	31698	31649;31698		85.357	34.502	1	5638900			33550	3782	16510	16583	39153;39154	39154					0.04232462619779653
TASEMILVL	9	Unmodified	_TASEMILVL_					0	0	0		ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	ENSG00000164543|ENST00000319357|STK17A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	488.772811	975.531069	2.7816	0.0013596	-3.8928	-0.0019027	-1.1112	-0.00054313	488.7723088327109	75.512	0.53833	77.294	77.103	77.641	1.7817	-0.015779	-0.00064319	NaN	60.39	46	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3662600			33551	3782	16510	16583							0.04232462619779653
TASGVGFIL	9	Unmodified	_TASGVGFIL_					0	0	0		ENSG00000135953|ENST00000258436|MFSD9;MFSD9|p.W286Yfs*25|1|0.07|ENSG00000135953|chr2:102718988-102718989|-/TGCGAGTTGTGCTTGT|frameshift_variant	ENSG00000135953|ENST00000258436|MFSD9	ENSG00000135953|ENST00000258436|MFSD9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	864.4861938357353	1	864.482545	863.475269	1.6498	0.0014262	-0.40491	-0.00035004	1.2449	0.0010762	864.4824769121659	65.551	0.30641	67.46	67.28	67.586	1.9085					12	9	2	0	0	0	0.076627	1	27512	27512		57.471	21.344	1	989290			33552	2695	16511	16584	39155	39155					0.03806997494461939
TASGVGFIL	9	Unmodified	_TASGVGFIL_					0	0	0		ENSG00000135953|ENST00000258436|MFSD9;MFSD9|p.W286Yfs*25|1|0.07|ENSG00000135953|chr2:102718988-102718989|-/TGCGAGTTGTGCTTGT|frameshift_variant	ENSG00000135953|ENST00000258436|MFSD9	ENSG00000135953|ENST00000258436|MFSD9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	864.482545	863.475269	1.9412	0.0016781	-0.061945	-5.3551E-05	1.8793	0.0016246	864.4833700211216	66.044	0.32707	67.443	67.279	67.606	1.3989	-0.0082736	0.00016578	NaN	57.471	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1181100			33553	2695	16511	16584							0.03806997494461939
TASLFVVSL	9	Unmodified	_TASLFVVSL_					0	0	0		ENSG00000272398|ENST00000606017|CD24;nc|ENSG00000272398|P25063-2|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.7748596072197	2	468.773668	935.532783	3.6235	0.0016986	-0.76506	-0.00035864	2.8585	0.00134	468.7733956148805	81.469	0.3411	82.702	82.595	82.936	1.2332					22	10	3	0	0	0	0.09539	2	34251	34200;34251		50.855	14.811	1	2379600			33554	5450	16512	16585	39156;39157	39157					0.06243839700039189
TASLFVVSL	9	Unmodified	_TASLFVVSL_					0	0	0		ENSG00000272398|ENST00000606017|CD24;nc|ENSG00000272398|P25063-2|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.5429565310478	1	936.54006	935.532783	3.6047	0.003376	-0.59371	-0.00055604	3.011	0.0028199	936.5396721042447	81.533	0.40242	82.766	82.564	82.966	1.2332					23	12	3	0	0	0	0.045797	1	34259	34259		71.134	0	1	3204300			33555	5450	16512	16585	39158	39158					0.06243839700039189
TASLFVVSL	9	Unmodified	_TASLFVVSL_					0	0	0		ENSG00000272398|ENST00000606017|CD24;nc|ENSG00000272398|P25063-2|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	936.5439941287041	1	936.54006	935.532783	3.0604	0.0028662	0.56601	0.00053009	3.6264	0.0033963	936.5399301840351	81.077	0.37446	82.773	82.578	82.953	1.6959					21	11	3	0	0	0	0.045797	1	33988	33988		71.134	0	1	3054800			33556	5450	16512	16585	39159	39159					0.06243839700039189
TASLFVVSL	9	Unmodified	_TASLFVVSL_					0	0	0		ENSG00000272398|ENST00000606017|CD24;nc|ENSG00000272398|P25063-2|CD24	ENSG00000272398|ENST00000606017|CD24	ENSG00000272398|ENST00000606017|CD24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.7760803103447	2	468.773668	935.532783	3.2479	0.0015225	0.60201	0.00028221	3.8499	0.0018047	468.7738460292777	81.119	0.31283	82.814	82.61	82.923	1.6959					18	9	2	0	0	0	0.031324	1	34022	34022		85.357	18.013	1	2539700			33557	5450	16512	16585	39160	39160					0.06243839700039189
TASLVIPAGR	10	Unmodified	_TASLVIPAGR_					0	0	0		nc|ENSG00000243244|Q9Y6Q2-2|STON1;ENSG00000068781|ENST00000394754|STON1-GTF2A1L;nc|ENSG00000242441|Q9UNN4-2|GTF2A1L;ENSG00000242441|ENST00000403751|GTF2A1L	nc|ENSG00000243244|Q9Y6Q2-2|STON1	nc|ENSG00000243244|Q9Y6Q2-2|STON1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	984.5865356326103	1	984.583656	983.57638	5.3468	0.0052644	-1.2927	-0.0012727	4.0541	0.0039916	984.5810527656563	90.304	0.3532	91.286	91.14	91.493	0.98157					16	10	2	0	0	0	0.6819	1	38057	38057		19.257	1.1106	1	1382000			33558	835	16513	16586	39161	39161					0.08393449197171776
TASLVIPAGR	10	Unmodified	_TASLVIPAGR_					0	0	0		nc|ENSG00000243244|Q9Y6Q2-2|STON1;ENSG00000068781|ENST00000394754|STON1-GTF2A1L;nc|ENSG00000242441|Q9UNN4-2|GTF2A1L;ENSG00000242441|ENST00000403751|GTF2A1L	nc|ENSG00000243244|Q9Y6Q2-2|STON1	nc|ENSG00000243244|Q9Y6Q2-2|STON1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	984.5896484255791	1	984.583656	983.57638	4.5447	0.0044746	-1.5607	-0.0015367	2.984	0.002938	984.5819152478219	89.87	0.25553	91.275	91.113	91.368	1.4044					11	7	2	0	0	0	0.57775	1	37864	37864		24.021	4.7636	1	941870			33559	835	16513	16586	39162	39162					0.08393449197171776
TASWPDWAL	9	Unmodified	_TASWPDWAL_					0	0	0		ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	ENSG00000152137|ENST00000281938|HSPB8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1046.493579089642	1	1046.49417	1045.4869	2.3808	0.0024915	-0.22758	-0.00023816	2.1532	0.0022533	1046.4946032497485	77.302	0.3176	78.583	78.474	78.791	1.2809					15	9	2	0	0	0	0.19075	1	32498	32498		34.102	13.649	1	980550			33560	3313	16514	16587	39163	39163					-0.03402805482187432
TATGLLLLTG	10	Unmodified	_TATGLLLLTG_					0	0	0			REV__ENSG00000163286|ENST00000295453|ALPG	REV__ENSG00000163286|ENST00000295453|ALPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2925903201103	2	480.292225	958.569897	2.1825	0.0010483	-1.2139	-0.00058301	0.96868	0.00046525	480.2914752586093	38.945	0.37439	40.241	40.038	40.413	1.2961					26	11	3	0	0	0	0.17319	1	16371	16371		52.268	2.7141	1	8691100	+		33561	10677	16515	16588	39164	39164					0.0889551124580521
TATMHILVV	9	Unmodified	_TATMHILVV_					0	0	0		ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7821838259697	2	492.78097	983.547388	1.816	0.00089491	-0.21626	-0.00010657	1.5998	0.00078834	492.7811272616443	48.158	0.25361	49.546	49.365	49.618	1.388					12	7	2	0	0	0	0.11478	1	20138	20138		44.407	14.182	1	1619900			33562	3801	16516	16589	39165	39165					0.05495588576548016
TATMHILVV	9	Unmodified	_TATMHILVV_					0	0	0		ENSG00000164880|ENST00000404767|INTS1;ENST00000468115.1_1_7:1523234-1533501:-|nuORF	ENSG00000164880|ENST00000404767|INTS1	ENSG00000164880|ENST00000404767|INTS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	492.78097	983.547388	2.6512	0.0013065	-2.1865	-0.0010775	0.46468	0.00022899	492.78023666521807	47.612	0.27712	49.588	49.435	49.713	1.976	0.020535	-0.0010497	NaN	44.407	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1272700			33563	3801	16516	16589							0.05495588576548016
TATPLIPK	8	Unmodified	_TATPLIPK_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.7647888064384	2	420.763104	839.511654	0.66703	0.00028066	3.4305	0.0014434	4.0975	0.0017241	420.76437244457696	16.383	0.22158	16.513	16.372	16.594	0.13022					17	7	3	0	0	0	0.88055	1	6794	6794		8.5933	2.8329	1	3088400	+		33564	9045	16517	16590	39166	39166					0.08547874391172172
TATPLIPK	8	Unmodified	_TATPLIPK_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	420.763104	839.511654	-0.27537	-0.00011587	4.7693	0.0020067	4.4939	0.0018909	420.7650205468638	16.485	0.25384	16.485	16.34	16.594	0	-0.074329	0.001379	NaN	8.5933	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2417000	+		33565	9045	16517	16590							0.08547874391172172
TATPLIPK	8	Unmodified	_TATPLIPK_					0	0	0			REV__ENSG00000101825|ENST00000217939|MXRA5	REV__ENSG00000101825|ENST00000217939|MXRA5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	420.763104	839.511654	0.66703	0.00028066	3.4305	0.0014434	4.0975	0.0017241	420.76437244457696	16.383	0.22158	16.513	16.372	16.594	0.13022	-0.046378	0.00025235	NaN	8.5933	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3088400	+		33566	9045	16517	16590							0.08547874391172172
TAVALLRLL	9	Unmodified	_TAVALLRLL_					0	0	0		ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.3276855349541	2	485.326402	968.638252	3.2321	0.0015686	-0.078542	-3.8119E-05	3.1536	0.0015305	485.32637872199945	74.768	0.95029	76.074	75.817	76.768	1.3063					74	30	4	0	0	0	0.0069529	4	31319	31319;31369;31408;31447		114.65	50.413	1	35647000			33567	1720	16518	16591	39167;39168;39169;39170	39167					0.15267800616322802
TAVALLRLL	9	Unmodified	_TAVALLRLL_					0	0	0		ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	ENSG00000110917|ENST00000228506|MLEC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3275939822197	2	485.326402	968.638252	2.9053	0.00141	-0.04456	-2.1626E-05	2.8607	0.0013884	485.3263836123737	74.177	0.71745	75.973	75.778	76.496	1.7962					68	22	4	0	0	0	0.0033884	5	31159	31074;31120;31159;31199;31247		126.57	47.838	1	26594000			33568	1720	16518	16591	39171;39172;39173;39174;39175	39173					0.15267800616322802
TAVTILSFSL	10	Unmodified	_TAVTILSFSL_					0	0	0		tr|A0A553SFX5|A0A553SFX5_NIACIHlyC/CorCfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09730PE=3SV=1	tr|A0A553SFX5|A0A553SFX5_NIACIHlyC/CorCfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09730PE=3SV=1	tr|A0A553SFX5|A0A553SFX5_NIACIHlyC/CorCfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09730PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.7668334841728	2	526.305332	1050.59611	1.8194	0.00095759	0.42216	0.00022219	2.2416	0.0011798	526.3055823554728	49.199	0.40158	51.176	50.947	51.349	1.9772					24	12	3	0	0	0	0.12412	1	20542	20542		10.074	3.3508	1	3327300			33569	16085	16519	16592	39176	39176					0.07283780417287744
TAWSCCGNGIM	11	Unmodified	_TAWSCCGNGIM_					0	0	0		ENST00000518258.5_1_8:96037405-96044296:+|nuORF	ENST00000518258.5_1_8:96037405-96044296:+|nuORF	ENST00000518258.5_1_8:96037405-96044296:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	571.8120605349541	2	571.725012	1141.43547	3.1252	0.0017867	-3.3387	-0.0019088	-0.21349	-0.00012206	571.7227658272834	74.828	0.28094	76.135	75.966	76.247	1.3063					21	8	4	0	0	0	0.14606	1	31439	31439		3.2813	0.97858	1	1132400			33570	7059	16520	16593	39177	39177					-0.1295895683440449
TAYHCLTVL	9	Unmodified	_TAYHCLTVL_					0	0	0			REV__ENSG00000111012|ENST00000228606|CYP27B1	REV__ENSG00000111012|ENST00000228606|CYP27B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7654601931572	2	510.762778	1019.511	2.8241	0.0014424	-0.10107	-5.1623E-05	2.723	0.0013908	510.7612800723822	75.938	1.1847	77.232	76.361	77.546	1.2938					71	38	4	0	0	0	0.22519	1	31937	31937		30.225	0	1	6728500	+		33571	9313	16521	16594	39178	39178					0.0020271167979899474
TAYHCLTVL	9	Unmodified	_TAYHCLTVL_					0	0	0			REV__ENSG00000111012|ENST00000228606|CYP27B1	REV__ENSG00000111012|ENST00000228606|CYP27B1	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7646057009697	2	510.762778	1019.511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.441	1	77.223	76.723	77.723	1.7817								0	0	0	0.049897	1	31644	31644		44.407	0	1		+		33572	9313	16521	16594	39179	39179					0.0020271167979899474
TAYPQVVVV	9	Unmodified	_TAYPQVVVV_					0	0	0		nc|ENSG00000166532|Q9ULI2-2|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;ENSG00000166532|ENST00000535829|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2789489626884	2	488.279118	974.543683	1.0172	0.00049668	-0.39558	-0.00019315	0.62162	0.00030352	488.2789496751248	52.601	0.46941	53.998	53.743	54.213	1.3966					23	14	2	0	0	0	0.091139	2	22018	21971;22018		52.268	18.166	1	2845300			33573	3910	16522	16595	39180;39181	39181					0.055392420743373805
TAYPQVVVV	9	Unmodified	_TAYPQVVVV_					0	0	0		nc|ENSG00000166532|Q9ULI2-2|RIMKLB;ENST00000408914.2_1_21:37422526-37423618:+|nuORF;ENSG00000166532|ENST00000535829|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	nc|ENSG00000166532|Q9ULI2-2|RIMKLB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2800475955009	2	488.279118	974.543683	1.414	0.00069041	0.37091	0.00018111	1.7849	0.00087151	488.27921474779254	52.086	0.46094	54.058	53.739	54.2	1.9722					29	14	3	0	0	0	0.17276	2	21794	21794;21854		36.127	3.8215	1	2815500			33574	3910	16522	16595	39182;39183	39182					0.055392420743373805
TAYTQSYSE	9	Unmodified	_TAYTQSYSE_					0	0	0		ENST00000596105.2_1_19:18119032-18119587:+|nuORF;ENST00000593460.1_1_19:18119032-18119587:+|nuORF;ENSG00000105643|ENST00000222250|ARRDC2	ENST00000596105.2_1_19:18119032-18119587:+|nuORF	ENST00000596105.2_1_19:18119032-18119587:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.2277099490166	2	525.224736	1048.43492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.345	1	49.675	49.175	50.175	0.33019								0	0	0	0.40883	1	20682	20682		7.9102	1.187	1				33575	1529	16523	16596	39184	39184					-0.08736013686620936
TCCCFCCCCCF	11	Unmodified	_TCCCFCCCCCF_					0	0	0		ENSG00000163793|ENST00000296097|DNAJC5G	ENSG00000163793|ENST00000296097|DNAJC5G	ENSG00000163793|ENST00000296097|DNAJC5G	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2678100466728	3	413.430125	1237.26855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.688	1	61.688	61.188	62.188	0								0	0	0	0.63775	1	25720	25720		0	0	1				33576	3724	16524	16597	39185	39185					-0.34059671633508515
TCCCPSCCQT	10	Unmodified	_TCCCPSCCQT_					0	0	0		ENSG00000204880|ENST00000333822|KRTAP4-8	ENSG00000204880|ENST00000333822|KRTAP4-8	ENSG00000204880|ENST00000333822|KRTAP4-8	MSMS	GG20161007_CRH_Patient100_W632_02	4	350.0435363650322	3	350.105681	1047.29521	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.947	1	55.917	55.417	56.417	1.9697								0	0	0	0.66256	1	22601	22601		0.12286	0	1				33577	5164	16525	16598	39186	39186					-0.22654200154647697
TCCECCNN	8	Unmodified	_TCCECCNN_					0	0	0		ENSG00000205359|ENST00000506729|SLCO6A1;nc|ENSG00000205359|Q86UG4-2|SLCO6A1;nc|ENSG00000205359|Q86UG4-3|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	ENSG00000205359|ENST00000506729|SLCO6A1	MSMS	GG20161007_CRH_Patient100_A02_01	1	445.1209289431572	2	445.118991	888.223429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.41	1	65.41	64.91	65.91	0								0	0	0	1.0178	1	27260	27260		0.69038	0.088878	1				33578	5179	16526	16599	39187	39187					-0.22515371516874438
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0969116091728	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.071	1	27.071	26.571	27.571	0								0	0	0	1.0178	1	11318	11318		0.45834	0.18932	1		+		33579	14819	16527	16600	39188	39188					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0968810915947	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.593	1	28.593	28.093	29.093	0								0	0	0	1.0178	1	11965	11965		0.45834	0.45834	1		+		33580	14819	16527	16600	39189	39189					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0974304080009	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.121	1	29.121	28.621	29.621	0								0	0	0	1.0178	1	12189	12189		0.45834	0.45834	1		+		33581	14819	16527	16600	39190	39190					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0970336794853	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.731	1	29.731	29.231	30.231	0								0	0	0	1.0178	1	12447	12447		0.45834	0.45834	1		+		33582	14819	16527	16600	39191	39191					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0972473025322	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.889	1	29.889	29.389	30.389	0								0	0	0	1.0178	1	12514	12514		0.45834	0.45834	1		+		33583	14819	16527	16600	39192	39192					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0968810915947	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.103	1	30.103	29.603	30.603	0								0	0	0	1.0178	1	12605	12605		0.45834	0.45834	1		+		33584	14819	16527	16600	39193	39193					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0964843630791	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.318	1	30.318	29.818	30.818	0								0	0	0	1.0178	1	12695	12695		0.45834	0	1		+		33585	14819	16527	16600	39194	39194					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0965759158134	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.127	1	32.127	31.627	32.627	0								0	0	0	1.0178	1	13459	13459		0.45834	0.45834	1		+		33586	14819	16527	16600	39195	39195					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0967285037041	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.253	1	32.253	31.753	32.753	0								0	0	0	1.0178	1	13512	13512		0.45834	0.45834	1		+		33587	14819	16527	16600	39196	39196					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0966674685478	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.474	1	32.474	31.974	32.974	0								0	0	0	1.0178	1	13605	13605		0.45834	0.45834	1		+		33588	14819	16527	16600	39197	39197					-0.20477931685570638
TCDDCQMM	8	Unmodified	_TCDDCQMM_					0	0	0			REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	REV__tr|A0A553SHU4|A0A553SHU4_NIACIFerredoxin--NADPreductaseOS=NialliacirculansOX=1397GN=CEQ21_13675PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0967590212822	3	316.097291	945.270045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.591	1	32.591	32.091	33.091	0								0	0	0	1.0178	1	13655	13655		0.45834	0.45834	1		+		33589	14819	16527	16600	39198	39198					-0.20477931685570638
TCDTSDSDC	9	Unmodified	_TCDTSDSDC_					0	0	0			REV__ENSG00000131808|ENST00000533718|FSHB	REV__ENSG00000131808|ENST00000533718|FSHB	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0961486697197	3	316.097002	945.269177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.792	1	49.792	49.292	50.292	0								0	0	0	0.42693	1	20780	20780		0	0	1		+		33590	9828	16528	16601	39199	39199					-0.20564731529282199
TCDTSDSDC	9	Unmodified	_TCDTSDSDC_					0	0	0			REV__ENSG00000131808|ENST00000533718|FSHB	REV__ENSG00000131808|ENST00000533718|FSHB	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0963317751884	3	316.097002	945.269177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.632	1	52.632	52.132	53.132	0								0	0	0	0.42693	1	21950	21950		0	0	1		+		33591	9828	16528	16601	39200	39200					-0.20564731529282199
TCDTSDSDC	9	Unmodified	_TCDTSDSDC_					0	0	0			REV__ENSG00000131808|ENST00000533718|FSHB	REV__ENSG00000131808|ENST00000533718|FSHB	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0967590212822	3	316.097002	945.269177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.764	1	52.764	52.264	53.264	0								0	0	0	0.42693	1	22005	22005		0	0	1		+		33592	9828	16528	16601	39201	39201					-0.20564731529282199
TCDTSDSDC	9	Unmodified	_TCDTSDSDC_					0	0	0			REV__ENSG00000131808|ENST00000533718|FSHB	REV__ENSG00000131808|ENST00000533718|FSHB	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0973083376884	3	316.097002	945.269177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.886	1	52.886	52.386	53.386	0								0	0	0	0.42693	1	22055	22055		0	0	1		+		33593	9828	16528	16601	39202	39202					-0.20564731529282199
TCDTSDSDC	9	Unmodified	_TCDTSDSDC_					0	0	0			REV__ENSG00000131808|ENST00000533718|FSHB	REV__ENSG00000131808|ENST00000533718|FSHB	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.0959960818291	3	316.097002	945.269177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.128	1	53.128	52.628	53.628	0								0	0	0	0.42693	1	22155	22155		0	0	1		+		33594	9828	16528	16601	39203	39203					-0.20564731529282199
TCFIKILTI	9	Unmodified	_TCFIKILTI_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3158447146416	2	526.314646	1050.61474	1.8468	0.000972	-0.37678	-0.00019831	1.47	0.00077369	526.3146383135079	66.755	0.99336	66.755	66.448	67.441	0					79	31	4	0	0	0	0.10478	1	27869	27869		43.772	3.8151	1	7609000	+		33595	9691	16529	16602	39204	39204					0.09145618787488274
TCFIKILTI	9	Unmodified	_TCFIKILTI_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3159057497978	2	526.314646	1050.61474	2.0971	0.0011038	0.22436	0.00011808	2.3215	0.0012218	526.3149022724378	66.186	0.82374	66.511	66.272	67.096	0.32449					70	25	4	0	0	0	0.13191	1	27843	27843		36.506	0	1	6361300	+		33596	9691	16529	16602	39205	39205					0.09145618787488274
TCFIKILTI	9	Unmodified	_TCFIKILTI_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3159057497978	2	526.314646	1050.61474	3.1024	0.0016328	-0.30137	-0.00015862	2.801	0.0014742	526.3144484740283	64.94	1.0252	66.339	66.039	67.064	1.3989					84	32	4	0	0	0	0.13191	1	27360	27360		36.506	0	1	10261000	+		33597	9691	16529	16602	39206	39206					0.09145618787488274
TCFIKILTI	9	Unmodified	_TCFIKILTI_					0	0	0			REV__ENSG00000126010|ENST00000380289|GRPR	REV__ENSG00000126010|ENST00000380289|GRPR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3160888552666	2	526.314646	1050.61474	2.3056	0.0012135	0.40113	0.00021112	2.7068	0.0014246	526.3148472502598	64.351	0.91204	66.279	66.045	66.957	1.928					80	28	4	0	0	0	0.037863	1	27078	27078		85.642	10.713	1	11229000	+		33598	9691	16529	16602	39207	39207					0.09145618787488274
TCGSGVHF	8	Unmodified	_TCGSGVHF_					0	0	0			REV__ENSG00000115758|ENST00000234111|ODC1	REV__ENSG00000115758|ENST00000234111|ODC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	404.1781188845634	2	404.176338	806.338123	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.821	1	96.01	95.51	96.51	1.1887								0	0	0	1.0178	1	39892	39892		0.79363	0	1		+		33599	9452	16530	16603	39208	39208					-0.07279234656743938
TCVDVRWRW	9	Unmodified	_TCVDVRWRW_					0	0	0		ENSG00000182324|ENST00000342291|KCNJ14	ENSG00000182324|ENST00000342291|KCNJ14	ENSG00000182324|ENST00000342291|KCNJ14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	610.8042480349541	2	610.8033	1219.59205	2.2945	0.0014015	-1.0963	-0.00066961	1.1982	0.00073188	610.8026770635731	47.138	0.57241	47.138	46.926	47.499	0					47	17	4	0	0	0	0.46905	1	19698	19698		16.942	0	1	9173400			33600	4612	16531	16604	39209	39209					-0.008965875574176607
TCWWWWFP	8	Unmodified	_TCWWWWFP_					0	0	0		ENST00000406772.5_2_22:38028020-38028119:+|nuORF	ENST00000406772.5_2_22:38028020-38028119:+|nuORF	ENST00000406772.5_2_22:38028020-38028119:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2487365603447	4	303.633741	1210.50586	2.5831	0.0007843	-2.7184	-0.0008254	-0.13536	-4.1099E-05	303.63303220502445	92.13	0.19441	93.457	93.341	93.535	1.3269					6	5	2	0	0	0	2.3239	1	38778	38778		0	0	1	92149			33601	6366	16532	16605	39210	39210					-0.0909754739213895
TDASGGRH	8	Unmodified	_TDASGGRH_					0	0	0		nc|ENSG00000160305|Q14689-6|DIP2A;ENSG00000160305|ENST00000417564|DIP2A;ENST00000478105.5_1_21:47981571-47987532:+|nuORF	nc|ENSG00000160305|Q14689-6|DIP2A	nc|ENSG00000160305|Q14689-6|DIP2A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	800.7443115115166	1	800.364555	799.357279	3.6433	0.002916	3.0669	0.0024547	6.7102	0.0053706	800.369232704517	95.149	0.10001	95.571	95.504	95.604	0.4212					5	3	2	0	0	0	2.3239	1	40016	40016		9.3474	0	1	1901200			33602	3554	16533	16606	39211	39211					-0.050425620414785044
TDDKNESYYG	10	Unmodified	_TDDKNESYYG_					0	0	0		tr|A0A7D6VMZ4|A0A7D6VMZ4_9CLOT2-isopropylmalatesynthaseOS=ClostridiumintestinaleOX=36845GN=leuAPE=3SV=1	tr|A0A7D6VMZ4|A0A7D6VMZ4_9CLOT2-isopropylmalatesynthaseOS=ClostridiumintestinaleOX=36845GN=leuAPE=3SV=1	tr|A0A7D6VMZ4|A0A7D6VMZ4_9CLOT2-isopropylmalatesynthaseOS=ClostridiumintestinaleOX=36845GN=leuAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.2450439333916	2	596.243657	1190.47276	2.3383	0.0013942	-0.15519	-9.2532E-05	2.1832	0.0013017	596.243658398558	50.61	0.66539	50.61	50.405	51.071	0					61	20	4	0	0	0	0.81324	1	21165	21165		10.824	2.6684	1	14263000			33603	16721	16534	16607	39212	39212					-0.11485547491793113
TDDNLMSDRKK	11	Unmodified	_TDDNLMSDRKK_					0	0	0		ENSG00000128536|ENST00000317716|CDHR3	ENSG00000128536|ENST00000317716|CDHR3	ENSG00000128536|ENST00000317716|CDHR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.8221313357353	2	661.822083	1321.62961	0.72503	0.00047984	-1.889	-0.0012502	-1.164	-0.00077036	661.8208865405692	20.607	0.21201	21.733	21.592	21.804	1.1254					9	6	2	0	0	0	0.90709	1	8600	8600		9.3831	0	1	540260			33604	2370	16535	16608	39213	39213					-0.018335858731461485
TDEITFAKL	9	Unmodified	_TDEITFAKL_					0	0	0		ENSG00000101846|ENST00000674429|STS;nc|ENSG00000101846|P08842|STS	ENSG00000101846|ENST00000674429|STS	ENSG00000101846|ENST00000674429|STS	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1404907107353	2	519.279315	1036.54408	1.6471	0.0008553	2.2258	0.0011558	3.8729	0.0020111	519.2813834260957	48.932	0.40289	50.32	50.079	50.482	1.388					21	12	3	0	0	0	0.11684	1	20423	20423		7.9102	0	1	1822200			33605	1367	16536	16609	39214	39214					0.027266170035318282
TDEPPFVH	8	Unmodified	_TDEPPFVH_					0	0	0		nc|ENSG00000167549|Q6QEF8-4|CORO6;ENST00000469090.5_1_17:27942752-27944334:-|nuORF;nc|ENSG00000167549|Q6QEF8-3|CORO6;nc|ENSG00000167549|Q6QEF8-2|CORO6;ENST00000459686.5_1_17:27942752-27944279:-|nuORF;ENST00000579388.5_1_17:27942752-27944279:-|nuORF;nc|ENSG00000167549|Q6QEF8|CORO6;ENSG00000167549|ENST00000388767|CORO6	nc|ENSG00000167549|Q6QEF8-4|CORO6	nc|ENSG00000167549|Q6QEF8-4|CORO6	MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2228576540947	2	471.2218	940.429047	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.46	1	97.46	96.96	97.96	0								0	0	0	1.0178	1	40745	40745		0.79363	0	1				33606	3975	16537	16610	39215	39215					-0.043550674076186624
TDIALIVSL	9	Unmodified	_TDIALIVSL_					0	0	0			REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	944.5666381716728	1	944.566275	943.558998	1.7011	0.0016068	-0.17991	-0.00016993	1.5211	0.0014368	944.5660884707589	78.563	0.37802	78.563	78.409	78.787	0					26	11	3	0	0	0	0.026628	1	32694	32694		92.822	3.3953	1	2325400	+		33607	15576	16538	16611	39216	39216					0.08496108871520391
TDIALIVSL	9	Unmodified	_TDIALIVSL_					0	0	0			REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7885619997978	2	472.786776	943.558998	2.5751	0.0012175	3.5382	0.0016728	6.1133	0.0028903	472.7888541068077	78.128	0.31969	78.437	78.259	78.579	0.30933					22	9	3	0	0	0	0.042029	1	32632	32632		74.423	3.7072	1	2910800	+		33608	15576	16538	16611	39217	39217					0.08496108871520391
TDIALIVSL	9	Unmodified	_TDIALIVSL_					0	0	0			REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	944.5689575076103	1	944.566275	943.558998	1.8578	0.0017548	0.44171	0.00041723	2.2995	0.0021721	944.5662968733778	78.156	0.35075	78.465	78.259	78.61	0.30932					22	10	3	0	0	0	0.029093	1	32685	32685		88.904	3.5469	1	3051200	+		33609	15576	16538	16611	39218	39218					0.08496108871520391
TDIALIVSL	9	Unmodified	_TDIALIVSL_					0	0	0			REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	944.5685912966728	1	944.566275	943.558998	2.2622	0.0021368	-0.43466	-0.00041057	1.8276	0.0017263	944.5660028394349	77.154	0.63028	78.435	78.001	78.631	1.2809					41	19	4	0	0	0	0.026628	2	32385	32337;32385		92.822	3.6287	1	9284200	+		33610	15576	16538	16611	39219;39220	39220					0.08496108871520391
TDIALIVSL	9	Unmodified	_TDIALIVSL_					0	0	0			REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	REV__tr|A0A7D6W053|A0A7D6W053_9CLOTphosphoenolpyruvatecarboxylaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	944.5682250857353	1	944.566275	943.558998	2.5778	0.0024349	-1.3207	-0.0012475	1.2571	0.0011874	944.5649183177874	76.633	0.41647	78.4	78.159	78.576	1.7672					30	12	3	0	0	0	0.026628	1	32149	32149		92.822	0	1	5864400	+		33611	15576	16538	16611	39221	39221					0.08496108871520391
TDLDDKNQQEN	11	Unmodified	_TDLDDKNQQEN_					0	0	0			REV__tr|A0A553SGD2|A0A553SGD2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10620PE=4SV=1	REV__tr|A0A553SGD2|A0A553SGD2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10620PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	440.5302612185478	3	440.528511	1318.5637	1.2013	0.00052922	2.3177	0.001021	3.5191	0.0015503	440.5294703939061	37.584	0.42932	37.584	37.386	37.815	0					36	14	3	0	0	0	0.94603	1	15757	15757		7.0371	0.41363	1	10624000	+		33612	14741	16539	16612	39222	39222					-0.0828370351432568
TDLDDKNQQEN	11	Unmodified	_TDLDDKNQQEN_					0	0	0			REV__tr|A0A553SGD2|A0A553SGD2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10620PE=4SV=1	REV__tr|A0A553SGD2|A0A553SGD2_NIACIHelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10620PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	440.528511	1318.5637	1.9595	0.00086324	1.4349	0.00063214	3.3945	0.0014954	440.52901973145197	36.989	0.30713	37.294	37.163	37.47	0.30497	-0.14492	-0.00057724	NaN	7.0371	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3887200	+		33613	14741	16539	16612							-0.0828370351432568
TDLGVGLS	8	Unmodified	_TDLGVGLS_					0	0	0			REV__ENSG00000135315|ENST00000403245|CEP162	REV__ENSG00000135315|ENST00000403245|CEP162	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	761.4965698122978	1	761.40396	760.396684	2.6808	0.0020412	-1.4525	-0.0011059	1.2283	0.00093526	761.402686704737	95.274	0.24947	95.397	95.176	95.426	0.12331					12	7	2	0	0	0	2.3239	1	39842	39842		18.135	0	1	1642400	+		33614	9933	16540	16613	39223	39223					0.006901451894009369
TDPDCDPP	8	Unmodified	_TDPDCDPP_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3130981326103	1	859.313825	858.306548	3.9247	0.0033726	-3.4958	-0.003004	0.42894	0.0003686	859.3094644348203	95.044	0.1432	95.785	95.681	95.824	0.74124					6	4	2	0	0	0	0.87935	1	39995	39995		9.3474	0	1	2034300	+		33615	10451	16541	16614	39224	39224					-0.12827272201354845
TDPDCDPP	8	Unmodified	_TDPDCDPP_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	859.3130981326103	1	859.313825	858.306548	3.9032	0.003354	-0.51047	-0.00043865	3.3927	0.0029154	859.3136760934588	95.212	0.19835	95.633	95.476	95.675	0.4212					13	8	2	0	0	0	2.3239	1	39995	39995		9.3474	7.0447	1	3602000	+		33616	10451	16541	16614	39225	39225					-0.12827272201354845
TDPVDLSVGT	10	Unmodified	_TDPVDLSVGT_					0	0	0		ENST00000486074.2_1_10:60966594-61005348:+|nuORF;nc|ENSG00000165443|Q96FC7-2|PHYHIPL;ENSG00000165443|ENST00000373880|PHYHIPL	ENST00000486074.2_1_10:60966594-61005348:+|nuORF	ENST00000486074.2_1_10:60966594-61005348:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2510864138603	2	502.250754	1002.48696	0.76138	0.00038241	2.7396	0.001376	3.501	0.0017584	502.25250803360666	19.006	0.36911	19.006	18.804	19.173	0					24	11	3	0	0	0	0.60583	2	7876	7876;7928		22.736	4.5899	1	1709500			33617	3838	16542	16615	39226;39227	39226					-0.014188502728529784
TDPVDLSVGT	10	Unmodified	_TDPVDLSVGT_					0	0	0		ENST00000486074.2_1_10:60966594-61005348:+|nuORF;nc|ENSG00000165443|Q96FC7-2|PHYHIPL;ENSG00000165443|ENST00000373880|PHYHIPL	ENST00000486074.2_1_10:60966594-61005348:+|nuORF	ENST00000486074.2_1_10:60966594-61005348:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	502.250754	1002.48696	1.03	0.00051732	2.9465	0.0014799	3.9766	0.0019972	502.25284047148193	18.716	0.18495	18.889	18.78	18.965	0.17285	-0.05851	0.00016733	NaN	22.736	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	307970			33618	3838	16542	16615							-0.014188502728529784
TDRDDSETL	9	Unmodified	_TDRDDSETL_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2313720583916	2	526.23055	1050.44655	1.7762	0.0009347	-3.7579	-0.0019775	-1.9817	-0.0010428	526.2301073727085	68.593	0.39792	70.446	70.25	70.648	1.853					33	12	5	0	0	0	0.68551	1	28749	28749		7.9102	0.62092	1	5056100			33619	2699	16543	16616	39228	39228					-0.07665816663279656
TDRVFGTD	8	Unmodified	_TDRVFGTD_					0	0	0		CON__Q9TRI1	CON__Q9TRI1	CON__Q9TRI1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.4295532107353	1	910.426487	909.41921	2.8166	0.0025643	0.96566	0.00087917	3.7823	0.0034435	910.4278871653032	104.84	0.075897	104.9	104.85	104.93	0.056801					14	3	5	0	0	0	0.87935	1	44309	44309		9.3474	0	1	160880000		+	33620	365	16544	16617	39229	39229					-0.03912255412990362
TDRVFGTD	8	Unmodified	_TDRVFGTD_					0	0	0		CON__Q9TRI1	CON__Q9TRI1	CON__Q9TRI1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	910.4295532107353	1	910.426487	909.41921	3.1007	0.002823	-0.4471	-0.00040705	2.6536	0.0024159	910.4265731132583	104.78	0.11034	104.94	104.88	104.99	0.16679					20	5	5	0	0	0	0.87935	1	44407	44407		9.3474	0	1	649950000		+	33621	365	16544	16617	39230	39230					-0.03912255412990362
TDRVFGTD	8	Unmodified	_TDRVFGTD_					0	0	0		CON__Q9TRI1	CON__Q9TRI1	CON__Q9TRI1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	910.426487	909.41921	1.1236	0.0010229	2.5615	0.002332	3.6851	0.003355	910.4291739192562	104.87	0.093292	104.87	104.83	104.92	0	-0.019275	0.0017946	NaN	9.3474	15	4	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	160250000		+	33622	365	16544	16617							-0.03912255412990362
TDRVFGTD	8	Unmodified	_TDRVFGTD_					0	0	0		CON__Q9TRI1	CON__Q9TRI1	CON__Q9TRI1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	910.426487	909.41921	2.8	0.0025492	-0.12914	-0.00011757	2.6709	0.0024316	910.4267282461213	104.69	0.053391	104.85	104.81	104.86	0.16055	-0.041886	-0.00065502	NaN	9.3474	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11065000		+	33623	365	16544	16617							-0.03912255412990362
TDSSVLVI	8	Unmodified	_TDSSVLVI_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	833.4636718630791	1	833.461475	832.454199	2.0561	0.0017137	0.42901	0.00035756	2.4851	0.0020713	833.4619071551346	40.837	0.43941	42.163	41.897	42.336	1.3254					30	13	3	0	0	0	0.27086	2	17142	17094;17142		74.396	0	1	5397300	+		33624	11265	16545	16618	39231;39232	39232					0.031269873949554494
TDSSVLVI	8	Unmodified	_TDSSVLVI_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	833.4686767458916	1	833.461475	832.454199	1.8493	0.0015413	1.6379	0.0013651	3.4872	0.0029064	833.4633560516407	40.417	0.43357	42.28	42.083	42.517	1.8624					28	13	3	0	0	0	0.27086	2	16915	16915;16959		74.396	0	1	5867200	+		33625	11265	16545	16618	39233;39234	39233					0.031269873949554494
TDSSVLVI	8	Unmodified	_TDSSVLVI_					0	0	0			REV__ENSG00000179002|ENST00000375371|TAS1R2	REV__ENSG00000179002|ENST00000375371|TAS1R2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	833.461475	832.454199	1.8493	0.0015413	1.6379	0.0013651	3.4872	0.0029064	833.4633560516407	40.417	0.43357	42.28	42.083	42.517	1.8624	0.05842	0.00081762	NaN	74.396	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5867200	+		33626	11265	16545	16618							0.031269873949554494
TDVVLVKR	8	Unmodified	_TDVVLVKR_					0	0	0			REV__ENSG00000196329|ENST00000358647|GIMAP5	REV__ENSG00000196329|ENST00000358647|GIMAP5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1338378787041	3	310.530798	928.570566	-3.2071	-0.0009959	1.6226	0.00050386	-1.5845	-0.00049204	310.53133064176365	19.539	0.74318	19.539	19.205	19.948	0					34	23	2	0	0	0	2.3239	1	8054	8054		0.40072	0	1	2582800	+		33627	11626	16546	16619	39235	39235					0.1034235068552789
TEAFKRDINS	10	Unmodified	_TEAFKRDINS_					0	0	0		ENST00000450663.1_1_1:173111181-173111367:-|nuORF	ENST00000450663.1_1_1:173111181-173111367:-|nuORF	ENST00000450663.1_1_1:173111181-173111367:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8026611208916	2	590.801477	1179.5884	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.055	1	59.024	58.524	59.524	1.9684								0	0	0	0.65219	1	23934	23934		12.241	1.4167	1				33628	6606	16547	16620	39236	39236					0.005790211497242126
TEAQVKKTEEQ	11	Unmodified	_TEAQVKKTEEQ_					0	0	0			REV__ENSG00000176714|ENST00000324364|CCDC121	REV__ENSG00000176714|ENST00000324364|CCDC121	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.88938	1289.64631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.753	1	15.523	15.023	16.023	0.76937								0	0	0	0.63775	1	6132	6132		0.50596	0	1		+		33629	11190	16548	16621	39237	39237					0.01307238284516643
TEASTIFV	8	Unmodified	_TEASTIFV_					0	0	0			REV__ENSG00000174145|ENST00000309447|NWD2	REV__ENSG00000174145|ENST00000309447|NWD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	867.9479247927666	1	867.445825	866.438549	0.24032	0.00020847	2.0533	0.0017811	2.2936	0.0019895	867.4476278669492	57.746	0.10511	59.715	59.679	59.784	1.969					5	3	2	0	0	0	2.3239	1	24210	24210		5.2307	0	1	1419100	+		33630	11116	16549	16622	39238	39238					-1.2991220842195617E-05
TECSGCFR	8	Unmodified	_TECSGCFR_					0	0	0		ENSG00000010319|ENST00000231721|SEMA3G	ENSG00000010319|ENST00000231721|SEMA3G	ENSG00000010319|ENST00000231721|SEMA3G	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.6803466677666	2	451.678388	901.342222	1.7316	0.00078213	3.0273	0.0013674	4.7589	0.0021495	451.67988671990037	42.864	0.57547	42.864	42.634	43.21	0					39	18	3	0	0	0	0.87935	3	17944	17895;17944;18012		9.3474	0	1	3625200			33631	551	16550	16623	39239;39240;39241	39240					-0.11239513225325481
TEDDEPDP	8	Unmodified	_TEDDEPDP_					0	0	0			REV__ENSG00000171055|ENST00000405912|FEZ2	REV__ENSG00000171055|ENST00000405912|FEZ2	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1729919314384	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.357	1	52.751	52.251	53.251	1.3938								0	0	0	1.0178	1	21504	21504		0.79363	0	1		+		33632	11007	16551	16624	39242	39242					-0.13172554883033172
TEDDEPDP	8	Unmodified	_TEDDEPDP_					0	0	0			REV__ENSG00000171055|ENST00000405912|FEZ2	REV__ENSG00000171055|ENST00000405912|FEZ2	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1718017458916	2	459.17217	916.329786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.484	1	52.878	52.378	53.378	1.3938								0	0	0	1.0178	1	21557	21557		0.79363	0	1		+		33633	11007	16551	16624	39243	39243					-0.13172554883033172
TEDLALTKK	9	Unmodified	_TEDLALTKK_					0	0	0			REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7939636111259	2	509.792589	1017.57063	2.301	0.001173	0.19539	9.9609E-05	2.4964	0.0012726	509.7927788754013	63.153	0.40925	63.153	62.926	63.335	0					36	12	4	0	0	0	0.40005	1	26313	26313		28.487	5.3384	1	4439800	+		33634	15928	16552	16625	39244	39244					0.06254305894856316
TEDLALTKK	9	Unmodified	_TEDLALTKK_					0	0	0			REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.7938720583916	2	509.792589	1017.57063	2.068	0.0010542	0.73541	0.00037491	2.8034	0.0014291	509.7930046688237	62.666	0.436	62.995	62.788	63.224	0.32974					35	13	4	0	0	0	0.50272	2	26257	26257;26311		21.747	5.9784	1	4931100	+		33635	15928	16552	16625	39245;39246	39245					0.06254305894856316
TEDLALTKK	9	Unmodified	_TEDLALTKK_					0	0	0			REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7957641482353	2	509.792589	1017.57063	3.3126	0.0016887	0.31912	0.00016269	3.6317	0.0018514	509.79266852308535	61.524	0.43184	62.942	62.744	63.176	1.4177					43	13	4	0	0	0	0.40005	2	25759	25759;25845		28.487	5.9784	1	17687000	+		33636	15928	16552	16625	39247;39248	39247					0.06254305894856316
TEDLALTKK	9	Unmodified	_TEDLALTKK_					0	0	0			REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	REV__TTC14|p.A408T|1|0.36|ENSG00000163728|chr3:180607697-180607697|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7940246462822	2	509.792589	1017.57063	2.8512	0.0014535	0.36019	0.00018362	3.2114	0.0016371	509.7926997182024	60.991	0.49161	62.957	62.79	63.282	1.9653					44	15	4	0	0	0	0.40005	1	25609	25609		28.487	5.3384	1	13108000	+		33637	15928	16552	16625	39249	39249					0.06254305894856316
TEENNNFYIEK	11	Unmodified	_TEENNNFYIEK_					0	0	0			REV__tr|A0A7D6ZZB9|A0A7D6ZZB9_9CLOTDUF2325domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05490PE=4SV=1	REV__tr|A0A7D6ZZB9|A0A7D6ZZB9_9CLOTDUF2325domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05490PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.5497619509697	3	467.549135	1399.62557	1.3319	0.00062275	1.3596	0.0006357	2.6916	0.0012584	467.5497548295201	22.695	0.26162	22.695	22.548	22.809	0					13	8	2	0	0	0	0.90077	1	9451	9451		9.7643	5.3581	1	2087800	+		33638	15790	16553	16626	39250	39250					-0.05825352095166636
TEENNNFYIEK	11	Unmodified	_TEENNNFYIEK_					0	0	0			REV__tr|A0A7D6ZZB9|A0A7D6ZZB9_9CLOTDUF2325domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05490PE=4SV=1	REV__tr|A0A7D6ZZB9|A0A7D6ZZB9_9CLOTDUF2325domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05490PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	467.549135	1399.62557	1.4185	0.00066323	2.1738	0.0010164	3.5924	0.0016796	467.5501443215127	22.481	0.18174	22.714	22.622	22.804	0.23306	0.0093645	0.00058739	NaN	9.7643	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663430	+		33639	15790	16553	16626							-0.05825352095166636
TEFQVLLFLLF	11	Unmodified	_TEFQVLLFLLF_					0	0	0		ENSG00000180475|ENST00000316770|OR10Q1	ENSG00000180475|ENST00000316770|OR10Q1	ENSG00000180475|ENST00000316770|OR10Q1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	342.5470458865166	4	343.199608	1368.76933	0.37516	0.00012875	-3.7564	-0.0012892	-3.3812	-0.0011604	343.1979220283876	31.314	0.75996	33.139	32.684	33.444	1.8246					32	25	2	0	0	0	0.14606	1	12986	12986		1.4551	0.12547	1	687760			33640	4548	16554	16627	39251	39251					0.09969146473713408
TEFYGDAT	8	Unmodified	_TEFYGDAT_					0	0	0			REV__ENSG00000106479|ENST00000223210|ZNF862	REV__ENSG00000106479|ENST00000223210|ZNF862	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	903.3015014529228	1	903.373054	902.365778	2.6573	0.0024005	3.5419	0.0031997	6.1992	0.0056002	903.3795933415864	87.372	0.21302	87.615	87.527	87.74	0.24387					11	6	2	0	0	0	0.87935	1	36665	36665		9.3474	0.75416	1	812330	+		33641	9210	16555	16628	39252	39252					-0.08931052915511373
TEGKPGAM	8	Unmodified	_TEGKPGAM_					0	0	0			REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	790.3823730349541	1	790.376365	789.369089	2.7496	0.0021732	3.1315	0.002475	5.881	0.0046482	790.3786861492196	103.53	0.12009	103.59	103.52	103.64	0.059502					15	5	4	0	0	0	0.89176	1	43438	43438		0.79363	0	1	414510000	+		33642	8614	16556	16629	39253	39253					-0.03402081342494512
TEGKPGAM	8	Unmodified	_TEGKPGAM_					0	0	0			REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	790.376365	789.369089	1.2966	0.0010248	4.4373	0.0035071	5.7339	0.0045319	790.3796833067435	103.55	0.13294	103.55	103.46	103.6	0	-0.017759	0.00050969	NaN	0.79363	21	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	598500000	+		33643	8614	16556	16629							-0.03402081342494512
TEGKPGAM	8	Unmodified	_TEGKPGAM_					0	0	0			REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	REV__ENST00000482722.5_1_1:40766856-40777859:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	790.376365	789.369089	2.7496	0.0021732	3.1315	0.002475	5.881	0.0046482	790.3786861492196	103.53	0.12009	103.59	103.52	103.64	0.059502	0.017759	-0.00052242	NaN	0.79363	15	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	414510000	+		33644	8614	16556	16629							-0.03402081342494512
TEGQLEHVKL	10	Unmodified	_TEGQLEHVKL_					0	0	0		ENSG00000186710|ENST00000335621|CFAP73	ENSG00000186710|ENST00000335621|CFAP73	ENSG00000186710|ENST00000335621|CFAP73	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3168212771416	2	577.31422	1152.61389	1.3321	0.00076903	3.059	0.001766	4.3911	0.002535	577.3162677571819	33.589	0.74027	33.589	33.174	33.914	0					38	23	3	0	0	0	0.37288	1	14056	14056		34.932	0.53034	1	2266500			33645	4802	16557	16630	39254	39254					0.043684956721335766
TEGQLEHVKL	10	Unmodified	_TEGQLEHVKL_					0	0	0		ENSG00000186710|ENST00000335621|CFAP73	ENSG00000186710|ENST00000335621|CFAP73	ENSG00000186710|ENST00000335621|CFAP73	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	577.31422	1152.61389	1.1803	0.0006814	3.2328	0.0018663	4.4131	0.0025477	577.3161491867963	33.147	0.33156	33.441	33.276	33.608	0.29431	-0.073926	0.00010785	NaN	34.932	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	968150			33646	4802	16557	16630							0.043684956721335766
TEISEMNR	8	Unmodified	_TEISEMNR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	490.2285949587822	2	490.229299	978.444045	0.043884	2.1513E-05	-0.043417	-2.1285E-05	0.00046631	2.286E-07	490.2291797880048	13.885	0.27871	14.612	14.38	14.658	0.72639					11	8	2	0	0	0	0.36182	1	5762	5762		62.573	24.599	1	1519000		+	33647	343	16558	16631	39255	39255					-0.04603943601921401
TEISEMNR	8	Unmodified	_TEISEMNR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;CON__REFSEQ:XP_092267;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.2294799685478	2	490.229299	978.444045	0.2486	0.00012187	0.19408	9.5146E-05	0.44268	0.00021702	490.22955499283853	13.766	0.27767	14.594	14.365	14.643	0.82789					15	8	3	0	0	0	0.29868	1	5700	5700		71.922	25.901	1	1345700		+	33648	343	16558	16631	39256	39256					-0.04603943601921401
TEISTRKKRRR	11	Unmodified	_TEISTRKKRRR_					0	0	0			REV__nc|ENSG00000028277|P09086-3|POU2F2	REV__nc|ENSG00000028277|P09086-3|POU2F2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	478.1987182497978	3	477.626936	1429.85898	4.304	0.0020557	-0.51218	-0.00024463	3.7918	0.0018111	477.6265802616221	93.783	0.35031	94.655	94.417	94.767	0.87176					16	10	2	0	0	0	0.14606	1	39394	39394		0.08335	0.010087	1	409570	+		33649	8572	16559	16632	39257	39257					0.16124213925627373
TELFKIAK	8	Unmodified	_TELFKIAK_					0	0	0			REV__nc|ENSG00000155158|Q5VTQ0-7|TTC39B	REV__nc|ENSG00000155158|Q5VTQ0-7|TTC39B	MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1969787478447	3	317.195416	948.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.78	1	101.85	101.35	102.35	0.067009								0	0	0	1.0178	1	42615	42615		0.45834	0	1		+		33650	10490	16560	16633	39258	39258					0.08807832453999254
TELKEKKK	8	Unmodified	_TELKEKKK_					0	0	0		L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|26|2|sense	L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|26|2|sense	L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|26|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1003.617541491985	1	1003.61462	1002.60735	3.4891	0.0035017	-0.80491	-0.00080781	2.6842	0.0026939	1003.6134850686408	106.91	0.15085	107.07	107	107.15	0.16174					21	6	4	0	0	0	0.89178	1	45811	45811		0.69038	0	1	105430000			33651	7708	16561	16634	39259	39259					0.10614602511418525
TELKKRRHK	9	Unmodified	_TELKKRRHK_					0	0	0			REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2507507205009	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.367	1	15.367	14.867	15.867	0								0	0	0	0.42693	1	6379	6379		2.4985	0	1		+		33652	11270	16562	16635	39260	39260					0.14134698402403956
TEPDENFYYCY	11	Unmodified	_TEPDENFYYCY_					0	0	0			REV__REG1B|p.T126Kfs*26|1|0.17|ENSG00000172023|chr2:79085548-79085549|-/AAGACAGAACACTGGATAAAAATAAGTTTGTT|frameshift_variant	REV__REG1B|p.T126Kfs*26|1|0.17|ENSG00000172023|chr2:79085548-79085549|-/AAGACAGAACACTGGATAAAAATAAGTTTGTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	722.2663452029228	2	722.2741	1442.53365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.565	1	19.544	19.044	20.044	0.97922								0	0	0	0.63775	1	7733	7733		5.2969	2.0156	1		+		33653	11054	16563	16636	39261	39261					-0.16991778503870592
TEPDLFETVVD	11	Unmodified	_TEPDLFETVVD_					0	0	0			REV__tr|A0A553SKA2|A0A553SKA2_NIACIPorphobilinogendeaminaseOS=NialliacirculansOX=1397GN=hemCPE=3SV=1	REV__tr|A0A553SKA2|A0A553SKA2_NIACIPorphobilinogendeaminaseOS=NialliacirculansOX=1397GN=hemCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2029601931572	3	422.202964	1263.58706	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.84	110.34	111.34	0.047043								0	0	0	0.63775	1	47785	47785		0	0	1		+		33654	14939	16564	16637	39262	39262					-0.03418657729730512
TEPIEFLFL	9	Unmodified	_TEPIEFLFL_					0	0	0		tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7988769412041	2	554.799883	1107.58521	2.2319	0.0012383	-3.0217	-0.0016764	-0.78978	-0.00043817	554.7979091220651	69.505	0.27739	70.87	70.787	71.064	1.3657					19	8	3	0	0	0	0.59203	1	29183	29183		11.64	0.52583	1	1814700			33655	16176	16565	16638	39263	39263					0.03572378043008939
TEPIEFLFL	9	Unmodified	_TEPIEFLFL_					0	0	0		tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	tr|A0A553SHY5|A0A553SHY5_NIACIPTSmaltosetransportersubunitIICBOS=NialliacirculansOX=1397GN=CEQ21_13900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7982055544853	2	554.799883	1107.58521	1.2057	0.00066892	-4.3968	-0.0024394	-3.1911	-0.0017704	554.7972225806325	69.054	0.427	70.907	70.709	71.136	1.853					27	13	3	0	0	0	0.37357	1	28982	28982		21.747	3.6117	1	2151100			33656	16176	16565	16638	39264	39264					0.03572378043008939
TEPMEKFI	8	Unmodified	_TEPMEKFI_					0	0	0			REV__tr|A0A553SIQ4|A0A553SIQ4_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15300PE=3SV=1	REV__tr|A0A553SIQ4|A0A553SIQ4_NIACIPurinepermeaseOS=NialliacirculansOX=1397GN=CEQ21_15300PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7513610720634	2	497.749336	993.484119	0.94061	0.00046819	2.5986	0.0012935	3.5392	0.0017616	497.75075843626433	21.126	0.23198	22.251	22.102	22.334	1.1254					11	7	2	0	0	0	0.87572	1	8831	8831		11.64	0.52583	1	793820	+		33657	14862	16566	16639	39265	39265					-0.012883969313520538
TEQLVLAL	8	Unmodified	_TEQLVLAL_					0	0	0			REV__ENSG00000188770|ENST00000367222|OPTC	REV__ENSG00000188770|ENST00000367222|OPTC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.7656432986259	2	443.765843	885.517133	2.8122	0.001248	-3.1978	-0.0014191	-0.38559	-0.00017111	443.7640263451187	72.527	1.1566	74.337	73.801	74.957	1.8101					64	36	3	0	0	0	0.89176	1	30473	30473		0.79363	0	1	3543300	+		33658	11586	16567	16640	39266	39266					0.0697955318298682
TERDYIKHLRD	11	Unmodified	_TERDYIKHLRD_					0	0	0		ENSG00000136002|ENST00000409359|ARHGEF4;ENST00000490728.5_1_2:131797582-131799036:+|nuORF;nc|ENSG00000136002|Q9NR80-3|ARHGEF4;nc|ENSG00000136002|Q9NR80-4|ARHGEF4;nc|ENSG00000136002|Q9NR80|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	ENSG00000136002|ENST00000409359|ARHGEF4	MSMS	GG20161007_CRH_Patient100_A02_01	1	723.3781005740166	2	723.378414	1444.74228	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.303	1	53.303	52.803	53.803	0								0	0	0	0.63775	1	22228	22228		3.2813	0.54611	1				33659	2699	16568	16641	39267	39267					0.037694309152357164
TEREALQQEQR	11	Unmodified	_TEREALQQEQR_					0	0	0		ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	ENSG00000015133|ENST00000389857|CCDC88C	MSMS	GG20161007_CRH_Patient100_W632_01	3	694.3488036990166	2	694.349854	1386.68515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.204	1	59.622	59.122	60.122	1.4181								0	0	0	0.63775	1	24403	24403		4.897	0	1				33660	596	16569	16642	39268	39268					0.007279636388375366
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	859.3175536990166	1	859.317196	858.309919	1.1965	0.0010282	-1.4555	-0.0012507	-0.25903	-0.00022259	859.3157036714608	100.4	0.21513	100.4	100.26	100.47	0					17	6	4	0	0	0	0.89008	1	42006	42006		2.5775	0	1	21147000			33661	7274	16570	16643	39269	39269					-0.12490345418984816
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	859.3175536990166	1	859.317196	858.309919	1.1965	0.0010282	-1.3838	-0.0011891	-0.18728	-0.00016093	859.3158830963923	100.74	0.14834	100.74	100.66	100.81	0					8	4	2	0	0	0	0.89008	1	42170	42170		2.5775	0	1	6375000			33662	7274	16570	16643	39270	39270					-0.12490345418984816
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3180419802666	1	859.317196	858.309919	3.1287	0.0026886	-1.8529	-0.0015922	1.2758	0.0010963	859.3155293714074	100.18	0.17619	100.36	100.26	100.44	0.18048					13	5	3	0	0	0	0.88587	1	42162	42162		5.2307	0	1	19313000			33663	7274	16570	16643	39271	39271					-0.12490345418984816
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3181640505791	1	859.317196	858.309919	3.1114	0.0026736	-2.9571	-0.0025411	0.15424	0.00013254	859.3155260606936	98.176	0.11548	98.432	98.359	98.475	0.25636					6	3	2	0	0	0	0.88587	1	41312	41312		5.2307	2.3415	1	18259000			33664	7274	16570	16643	39272	39272					-0.12490345418984816
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3186523318291	1	859.317196	858.309919	3.1124	0.0026745	-3.9273	-0.0033748	-0.8149	-0.00070026	859.3136036307176	98.437	0.20045	98.694	98.565	98.765	0.25636					15	6	3	0	0	0	0.88587	1	41454	41454		5.2307	2.6532	1	48339000			33665	7274	16570	16643	39273	39273					-0.12490345418984816
TESTCMTS	8	Unmodified	_TESTCMTS_					0	0	0		ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	ENST00000552221.1_1_12:108941677-108954930:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	859.3189575076103	1	859.317196	858.309919	3.1077	0.0026705	-0.21686	-0.00018635	2.8908	0.0024841	859.3171718819921	100.49	0.18282	100.69	100.56	100.75	0.20526					9	5	2	0	0	0	0.88663	1	42263	42263		4.756	2.1785	1	8518600			33666	7274	16570	16643	39274	39274					-0.12490345418984816
TETSMNTA	8	Unmodified	_TETSMNTA_					0	0	0		ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	ENSG00000046604|ENST00000261590|DSG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	854.3607055544853	1	854.356024	853.348747	2.9743	0.0025412	0.74373	0.00063541	3.7181	0.0031766	854.356152658912	102.07	0.14312	102.24	102.16	102.31	0.17032					8	4	2	0	0	0	0.88587	1	42949	42949		5.2307	0	1	51693000			33667	673	16571	16644	39275	39275					-0.08379296792963942
TEVFPIHL	8	Unmodified	_TEVFPIHL_					0	0	0			REV__ENSG00000165323|ENST00000525166|FAT3	REV__ENSG00000165323|ENST00000525166|FAT3	MSMS	GG20161007_CRH_Patient100_A02_02	2	478.2660095095634	2	478.26601	954.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.97	1	105.02	104.52	105.52	0.056801								0	0	0	1.0178	1	44401	44401		2.5775	0	1		+		33668	10776	16572	16645	39276	39276					0.0383897290286086
TEVGACPP	8	Unmodified	_TEVGACPP_					0	0	0		chr20:63740038-63742732|125|34.7|0.0|21.73|+|0|SLC2A4RG,None|1;nc|ENSG00000125520|Q9NR83-4|SLC2A4RG;ENST00000493772.5_1_20:62372637-62374340:+|nuORF;nc|ENSG00000125520|Q9NR83-3|SLC2A4RG;ENSG00000125520|ENST00000266077|SLC2A4RG	chr20:63740038-63742732|125|34.7|0.0|21.73|+|0|SLC2A4RG,None|1	chr20:63740038-63742732|125|34.7|0.0|21.73|+|0|SLC2A4RG,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	773.3528930544853	1	773.349816	772.34254	2.5921	0.0020046	0.94698	0.00073234	3.5391	0.0027369	773.3505763950504	103.49	0.14798	103.65	103.58	103.73	0.16445					11	6	3	0	0	0	0.88504	1	43629	43629		5.7604	0.52976	1	29661000			33669	251	16573	16646	39277	39277					-0.05273770233839059
TEVIVEKTK	9	Unmodified	_TEVIVEKTK_					0	0	0		tr|A0A7D6W2C4|A0A7D6W2C4_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05645PE=4SV=1	tr|A0A7D6W2C4|A0A7D6W2C4_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05645PE=4SV=1	tr|A0A7D6W2C4|A0A7D6W2C4_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05645PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	523.8073608279228	2	523.808239	1045.60193	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.725	1	97.952	97.452	98.452	0.22776								0	0	0	0.32813	1	41127	41127		15.847	0	1				33670	17031	16574	16647	39278	39278					0.08094878928932303
TEVKGDFLL	9	Unmodified	_TEVKGDFLL_					0	0	0		tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	tr|A0A553SPF7|A0A553SPF7_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26295PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2840759158134	2	511.281857	1020.54916	5.9796	0.0030572	-0.48234	-0.00024661	5.4972	0.0028106	511.28134726985087	89.039	0.38616	90.095	89.853	90.239	1.0562					20	11	2	0	0	0	0.44535	1	37565	37565		18.135	1.0484	1	2604200			33671	16466	16575	16648	39279	39279					0.03970920866152028
TEWSVAVG	8	Unmodified	_TEWSVAVG_					0	0	0			REV__nc|ENSG00000164334|A1A519-4|FAM170A	REV__nc|ENSG00000164334|A1A519-4|FAM170A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	424.7124511599541	2	424.711068	847.407583	1.0291	0.00043708	1.5455	0.0006564	2.5746	0.0010935	424.7112314325945	21.677	0.27206	22.854	22.719	22.991	1.177					13	8	2	0	0	0	0.83518	1	9066	9066		18.135	2.2878	1	430440	+		33672	10733	16576	16649	39280	39280					-0.022224524363195997
TEWSVAVG	8	Unmodified	_TEWSVAVG_					0	0	0			REV__nc|ENSG00000164334|A1A519-4|FAM170A	REV__nc|ENSG00000164334|A1A519-4|FAM170A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	424.711068	847.407583	1.0291	0.00043708	1.5455	0.0006564	2.5746	0.0010935	424.7112314325945	21.677	0.27206	22.854	22.719	22.991	1.177	-0.02421	0.00020803	NaN	18.135	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	430440	+		33673	10733	16576	16649							-0.022224524363195997
TEYNDCYK	8	Unmodified	_TEYNDCYK_					0	0	0			REV__tr|A0A7D6W3A1|A0A7D6W3A1_9CLOTPhosphoenolpyruvatecarboxykinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09145PE=4SV=1	REV__tr|A0A7D6W3A1|A0A7D6W3A1_9CLOTPhosphoenolpyruvatecarboxykinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09145PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	346.5593139529228	3	345.80778	1034.40151	1.6636	0.00057529	-0.51991	-0.00017979	1.1437	0.0003955	346.141671008688	65.374	0.34063	66.773	66.54	66.881	1.3989					17	10	2	0	0	0	2.3239	1	27347	27347		1.8442	0	1	726660	+		33674	15610	16577	16650	39281	39281					-0.11431338730176321
TEYNDCYK	8	Unmodified	_TEYNDCYK_					0	0	0			REV__tr|A0A7D6W3A1|A0A7D6W3A1_9CLOTPhosphoenolpyruvatecarboxykinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09145PE=4SV=1	REV__tr|A0A7D6W3A1|A0A7D6W3A1_9CLOTPhosphoenolpyruvatecarboxykinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09145PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	345.80778	1034.40151	1.3856	0.00047914	-2.1326	-0.00073745	-0.747	-0.00025832	346.1415955017373	64.879	0.2793	66.795	66.666	66.945	1.9159	0.010705	-0.0010329	NaN	1.8442	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	856840	+		33675	15610	16577	16650							-0.11431338730176321
TFCSSRCTHK	10	Unmodified	_TFCSSRCTHK_					0	0	0		ENST00000368003.5_1_1:161123576-161123651:+|nuORF	ENST00000368003.5_1_1:161123576-161123651:+|nuORF	ENST00000368003.5_1_1:161123576-161123651:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2840453982353	3	390.511192	1168.51175	-0.99476	-0.00038847	-1.2961	-0.00050613	-2.2908	-0.0008946	390.8436825885447	10.213	0.79779	10.864	10.522	11.319	0.65058					45	26	2	0	0	0	0.12538	1	4409	4409		5.7834	0.88642	1	793370			33676	6077	16578	16651	39282	39282					-0.06576816942788355
TFDNLIDVL	9	Unmodified	_TFDNLIDVL_					0	0	0			REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1049.560839831829	1	1049.55135	1048.54408	3.5268	0.0037015	0.18007	0.000189	3.7068	0.0038905	1049.5516347742666	73.223	0.34625	74.553	74.288	74.634	1.3297					19	10	2	0	0	0	0.098163	1	30739	30739		49.933	9.9757	1	1218900	+		33677	15930	16579	16652	39283	39283					0.02174617003538515
TFDNLIDVL	9	Unmodified	_TFDNLIDVL_					0	0	0			REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1049.552905261517	1	1049.55135	1048.54408	3.6159	0.0037951	0.4476	0.00046978	4.0635	0.0042649	1049.5524740303867	72.675	0.34705	74.485	74.292	74.639	1.8101					17	10	2	0	0	0	0.23535	1	30546	30546		29.082	10.935	1	827140	+		33678	15930	16579	16652	39284	39284					0.02174617003538515
TFDNLIDVL	9	Unmodified	_TFDNLIDVL_					0	0	0			REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1049.55135	1048.54408	3.5268	0.0037015	0.18007	0.000189	3.7068	0.0038905	1049.5516347742666	73.223	0.34625	74.553	74.288	74.634	1.3297	0.034262	-0.00015528	NaN	49.933	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1218900	+		33679	15930	16579	16652							0.02174617003538515
TFDNLIDVL	9	Unmodified	_TFDNLIDVL_					0	0	0			REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	REV__UMPS|p.H283L|1|0.04|ENSG00000114491|chr3:124738105-124738105|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1049.55135	1048.54408	3.6159	0.0037951	0.4476	0.00046978	4.0635	0.0042649	1049.5524740303867	72.675	0.34705	74.485	74.292	74.639	1.8101	-0.034262	0.0001255	NaN	49.933	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	827140	+		33680	15930	16579	16652							0.02174617003538515
TFFPFHEYF	9	Unmodified	_TFFPFHEYF_					0	0	0		ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.7825195193291	2	617.782025	1233.5495	2.7249	0.0016834	-1.6407	-0.0010136	1.0842	0.00066982	617.7798064746339	74.145	0.40108	75.941	75.808	76.209	1.7962					20	12	2	0	0	0	0.19075	1	31129	31129		34.102	17.953	1	1505700			33681	614	16580	16653	39285	39285					-0.057936594140073794
TFFPFHEYF	9	Unmodified	_TFFPFHEYF_					0	0	0		ENSG00000021776|ENST00000156471|AQR;ENST00000543879.6_1_15:35166876-35196659:-|nuORF	ENSG00000021776|ENST00000156471|AQR	ENSG00000021776|ENST00000156471|AQR	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	617.782025	1233.5495	2.9462	0.0018201	-4.2024	-0.0025962	-1.2563	-0.00077611	617.7792924492528	74.633	0.42865	75.94	75.786	76.214	1.3063	-0.00090061	-0.0014106	NaN	34.102	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	917600			33682	614	16580	16653							-0.057936594140073794
TFHDHALMIIF	11	Unmodified	_TFHDHALMIIF_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.8980590701103	3	448.897152	1343.66963	3.3411	0.0014998	-1.3136	-0.00058967	2.0275	0.00091014	448.8964804654872	64.61	0.64915	66.017	65.77	66.419	1.4071					56	20	3	0	0	0	0.90941	2	27090	27090;27181		9.2438	6.1715	1	1476000			33683	5070	16581	16654	39286;39287	39286					0.011540055881141598
TFHDHALMIIF	11	Unmodified	_TFHDHALMIIF_					0	0	0		ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	ENSG00000198712|ENST00000361739|MT-CO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.8980285525322	3	448.897152	1343.66963	2.8437	0.0012765	-0.56807	-0.00025501	2.2757	0.0010215	449.2315152494613	64.064	0.84496	65.992	65.674	66.518	1.928					60	26	3	0	0	0	0.84946	2	26880	26814;26880		12.856	8.9796	1	1390600			33684	5070	16581	16654	39288;39289	39289					0.011540055881141598
TFHLIRLFWRK	11	Unmodified	_TFHLIRLFWRK_					0	0	0			REV__ENST00000547611.5_1_12:95611639-95668525:+|nuORF	REV__ENST00000547611.5_1_12:95611639-95668525:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	379.2497131228447	4	379.977945	1515.88267	-0.09589	-3.6436E-05	1.4566	0.00055347	1.3607	0.00051703	380.2283618417032	63.568	0.46717	63.568	63.335	63.802	0					18	14	2	0	0	0	0.14606	1	26544	26544		0.50596	0.09769	1	587220	+		33685	13811	16582	16655	39290	39290					0.14536679430079857
TFHSFFQHF	9	Unmodified	_TFHSFFQHF_					0	0	0		ENST00000583350.1_1_18:14377547-14378720:-|nuORF;nc|ENSG00000147601|P54274-2|TERF1;ENSG00000147601|ENST00000276603|TERF1	ENST00000583350.1_1_18:14377547-14378720:-|nuORF	ENST00000583350.1_1_18:14377547-14378720:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.8551513552666	3	399.854053	1196.54033	1.1622	0.0004647	0.87554	0.00035009	2.0377	0.00081479	400.188640875414	46.287	0.40285	47.662	47.43	47.832	1.3751					30	12	3	0	0	0	0.026836	1	19355	19355		74.2	56.757	1	3023800			33686	3187	16583	16656	39291	39291					-0.050080079796771315
TFHSFFQHF	9	Unmodified	_TFHSFFQHF_					0	0	0		ENST00000583350.1_1_18:14377547-14378720:-|nuORF;nc|ENSG00000147601|P54274-2|TERF1;ENSG00000147601|ENST00000276603|TERF1	ENST00000583350.1_1_18:14377547-14378720:-|nuORF	ENST00000583350.1_1_18:14377547-14378720:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2775756716728	2	599.277441	1196.54033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.707	1	47.677	47.177	48.177	1.9703								0	0	0	0.22909	1	19147	19147		24.021	12.38	1				33687	3187	16583	16656	39292	39292					-0.050080079796771315
TFICKDSESNK	11	Unmodified	_TFICKDSESNK_					0	0	0		nc|ENSG00000144366|Q9UBP9-2|GULP1;nc|ENSG00000144366|Q9UBP9-4|GULP1;ENSG00000144366|ENST00000409830|GULP1	nc|ENSG00000144366|Q9UBP9-2|GULP1	nc|ENSG00000144366|Q9UBP9-2|GULP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.2989990115166	2	636.300452	1270.58635	1.0258	0.00065274	-2.1147	-0.0013456	-1.0888	-0.00069283	636.2985924454714	71.245	0.28099	73.068	72.91	73.191	1.824					14	8	2	0	0	0	0.85967	1	29893	29893		12.241	0	1	1745300			33688	3072	16584	16657	39293	39293					-0.03811775650410709
TFIFLKKYIQ	10	Unmodified	_TFIFLKKYIQ_					0	0	0		ENSG00000137494|ENST00000533342|ANKRD42	ENSG00000137494|ENST00000533342|ANKRD42	ENSG00000137494|ENST00000533342|ANKRD42	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2601806521416	3	434.260308	1299.7591	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.17	1	110.32	109.82	110.82	0.15228								0	0	0	0.66254	1	47786	47786		0.15932	0	1				33689	2770	16585	16658	39294	39294					0.12120583539149266
TFIGKELPKG	10	Unmodified	_TFIGKELPKG_					0	0	0			REV__ENSG00000115839|ENST00000264158|RAB3GAP1	REV__ENSG00000115839|ENST00000264158|RAB3GAP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3182250857353	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.466	1	72.791	72.291	73.291	0.32494								0	0	0	0.6607	1	30319	30319		3.2813	0	1		+		33690	9458	16586	16659	39295	39295					0.08222889028456848
TFIQFSGIL	9	Unmodified	_TFIQFSGIL_					0	0	0			REV__tr|A0A553SJ95|A0A553SJ95_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16365PE=3SV=1	REV__tr|A0A553SJ95|A0A553SJ95_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16365PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2930175662041	2	513.286943	1024.55933	2.0424	0.0010483	1.5481	0.00079463	3.5905	0.001843	513.2891422121801	49.682	0.59621	51.659	51.286	51.883	1.9772					41	18	3	0	0	0	0.18809	1	20697	20697		34.402	0	1	4180900	+		33691	14890	16587	16660	39296	39296					0.04803528591401118
TFITSGMRF	9	Unmodified	_TFITSGMRF_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-4|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2646362185478	2	530.268227	1058.5219	1.7301	0.00091741	-1.2363	-0.00065556	0.49381	0.00026185	530.269259798395	50.674	0.15297	52.068	51.986	52.139	1.3938					7	4	2	0	0	0	0.044893	1	21203	21203		71.922	25.901	1	1783300			33692	1312	16588	16661	39297	39297					-0.005018859458914449
TFITSGMRF	9	Unmodified	_TFITSGMRF_					0	0	0		nc|ENSG00000100979|P55058-3|PLTP;nc|ENSG00000100979|P55058-2|PLTP;ENSG00000100979|ENST00000372431|PLTP;nc|ENSG00000100979|P55058-4|PLTP	nc|ENSG00000100979|P55058-3|PLTP	nc|ENSG00000100979|P55058-3|PLTP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2701904177666	2	530.268227	1058.5219	1.8318	0.00097134	-1.8553	-0.00098382	-0.023534	-1.2479E-05	530.269487841387	50.061	0.21388	52.038	51.914	52.128	1.9772					14	6	3	0	0	0	0.075994	1	20984	20984		57.722	25.416	1	3144400			33693	1312	16588	16661	39298	39298					-0.005018859458914449
TFIVSGLLTV	10	Unmodified	_TFIVSGLLTV_					0	0	0			REV__ENSG00000095209|ENST00000374692|TMEM38B	REV__ENSG00000095209|ENST00000374692|TMEM38B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	525.3168212771416	2	525.3157	1048.61685	2.0443	0.0010739	-0.51375	-0.00026988	1.5306	0.00080402	525.3149800805675	64.747	0.60612	64.747	64.56	65.166	0					39	18	3	0	0	0	0.12991	1	26999	26999		58.679	4.846	1	3369800	+		33694	8925	16589	16662	39299	39299					0.09448370796940253
TFIVSGLLTV	10	Unmodified	_TFIVSGLLTV_					0	0	0			REV__ENSG00000095209|ENST00000374692|TMEM38B	REV__ENSG00000095209|ENST00000374692|TMEM38B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3171874880791	2	525.3157	1048.61685	2.083	0.0010942	0.41198	0.00021642	2.495	0.0013106	525.3155303499157	64.184	0.61283	64.513	64.305	64.918	0.32899					36	18	3	0	0	0	0.24174	1	26857	26857		43.858	3.9086	1	3557700	+		33695	8925	16589	16662	39300	39300					0.09448370796940253
TFKKFLFA	8	Unmodified	_TFKKFLFA_					0	0	0		tr|A0A7D6ZX85|A0A7D6ZX85_9CLOTYcxBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10950PE=4SV=1	tr|A0A7D6ZX85|A0A7D6ZX85_9CLOTYcxBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10950PE=4SV=1	tr|A0A7D6ZX85|A0A7D6ZX85_9CLOTYcxBfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10950PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	501.2619506716728	2	501.294571	1000.57459	2.2805	0.0011432	-1.8365	-0.00092063	0.44403	0.00022259	501.2942722930258	67.506	0.28111	67.829	67.683	67.964	0.32269					13	8	2	0	0	0	2.3239	1	28266	28266		5.7604	0	1	888500			33696	17185	16590	16663	39301	39301					0.07432440179218247
TFKNIMKRL	9	Unmodified	_TFKNIMKRL_					0	0	0		tr|A0A7D6VR89|A0A7D6VR89_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01395PE=4SV=1	tr|A0A7D6VR89|A0A7D6VR89_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01395PE=4SV=1	tr|A0A7D6VR89|A0A7D6VR89_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01395PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8450805544853	2	575.841894	1149.66923	2.5416	0.0014636	2.6939	0.0015513	5.2355	0.0030148	575.8431631757659	75.333	0.92003	76.639	76.374	77.294	1.3063					71	29	3	0	0	0	0.76456	2	31661	31661;31715		4.756	0	1	1861900			33697	16824	16591	16664	39302;39303	39302					0.10038630658914371
TFLAINIVL	9	Unmodified	_TFLAINIVL_					0	0	0			REV__ENST00000419821.6_1_12:118587740-118587944:-|nuORF	REV__ENST00000419821.6_1_12:118587740-118587944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.3140136599541	2	502.312961	1002.61137	4.8848	0.0024537	-0.035619	-1.7892E-05	4.8492	0.0024358	502.31239954268625	87.659	0.37352	88.75	88.521	88.895	1.0918					27	11	3	0	0	0	0.66839	1	36917	36917		8.5933	0	1	3546300	+		33698	12970	16592	16665	39304	39304					0.11016692005114237
TFLDDSGSLNW	11	Unmodified	_TFLDDSGSLNW_					0	0	0		nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII	nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.7851440310478	2	627.785492	1253.55643	1.4283	0.00089668	-1.3032	-0.00081814	0.1251	7.8537E-05	627.7849362485085	71.637	0.40547	72.978	72.748	73.153	1.3415					24	12	3	0	0	0	0.024558	2	30049	30049;30104		96.111	67.616	1	2579600			33699	4462	16593	16666	39305;39306	39305					-0.06020391324091179
TFLDDSGSLNW	11	Unmodified	_TFLDDSGSLNW_					0	0	0		nc|ENSG00000177731|Q13045-2|FLII;nc|ENSG00000177731|Q13045-3|FLII;ENST00000578101.5_1_17:18148454-18160363:-|nuORF;ENSG00000177731|ENST00000327031|FLII	nc|ENSG00000177731|Q13045-2|FLII	nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.7850829958916	2	627.785492	1253.55643	0.9739	0.0006114	-1.7176	-0.0010783	-0.74367	-0.00046686	627.7844134557674	71.315	0.37581	73.139	72.91	73.286	1.824					25	11	3	0	0	0	0.038204	1	29895	29895		71.922	49.186	1	2474900			33700	4462	16593	16666	39307	39307					-0.06020391324091179
TFLFVLVIKL	10	Unmodified	_TFLFVLVIKL_					0	0	0			REV__tr|A0A553SKV6|A0A553SKV6_NIACIStageIIIsporulationproteinAEOS=NialliacirculansOX=1397GN=spoIIIAEPE=4SV=1	REV__tr|A0A553SKV6|A0A553SKV6_NIACIStageIIIsporulationproteinAEOS=NialliacirculansOX=1397GN=spoIIIAEPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8924438357353	2	596.888835	1191.76312	3.2999	0.0019697	2.3319	0.0013919	5.6318	0.0033615	596.8904080578246	105.94	0.1581	106.1	106.01	106.17	0.16679					28	7	5	0	0	0	0.89803	1	45210	45210		0.40072	0	1	618420000	+		33701	14969	16594	16667	39308	39308					0.17490673032830273
TFLITTDNEGK	11	Unmodified	_TFLITTDNEGK_					0	0	0		ENSG00000115221|ENST00000283249|ITGB6;nc|ENSG00000115221|P18564-2|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	ENSG00000115221|ENST00000283249|ITGB6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.5469543337822	3	413.546954	1237.61903	-0.70907	-0.00029323	-1.7816	-0.00073676	-2.4906	-0.00103	413.54625280139453	9.8606	0.80268	9.8606	9.7227	10.525	0					32	25	2	0	0	0	0.95935	1	4098	4098		6.2344	0.93747	1	672000			33702	1904	16595	16668	39309	39309					0.00972754744066151
TFLNRLQDL	9	Unmodified	_TFLNRLQDL_					0	0	0		NOP9|p.R413Tfs*41|1|0.03|ENSG00000196943|chr14:24303166-24303167|-/A|frameshift_variant;nc|ENSG00000196943|Q86U38-2|NOP9;ENSG00000196943|ENST00000267425|NOP9	NOP9|p.R413Tfs*41|1|0.03|ENSG00000196943|chr14:24303166-24303167|-/A|frameshift_variant	NOP9|p.R413Tfs*41|1|0.03|ENSG00000196943|chr14:24303166-24303167|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3114501833916	2	560.31148	1118.60841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.012	1	43.012	42.512	43.512	0								0	0	0	0.39385	1	18004	18004		9.3831	0	1				33703	4970	16596	16669	39310	39310					0.053848168803369845
TFLSEILRL	9	Unmodified	_TFLSEILRL_					0	0	0			REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	546.3230468630791	2	546.326599	1090.63865	1.2076	0.00065973	1.8475	0.0010094	3.0551	0.0016691	546.3274511555086	70.584	0.3616	72.422	72.319	72.681	1.8378					30	11	4	0	0	0	0.10844	1	29601	29601		16.942	1.0951	1	16740000	+		33704	8778	16597	16670	39311	39311					0.09695175545516577
TFLTVYWTPER	11	Unmodified	_TFLTVYWTPER_					0	0	0		ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	ENSG00000090339|ENST00000264832|ICAM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.5785400271416	3	471.578477	1411.7136	2.3366	0.0011019	-2.7835	-0.0013126	-0.44694	-0.00021077	471.5772491438653	43.937	0.44918	43.937	43.682	44.131	0					32	13	3	0	0	0	0.9945	1	18342	18342		4.1166	1.4854	1	1220100			33705	1137	16598	16671	39312	39312					0.024213132860722908
TFMDRGFVF	9	Unmodified	_TFMDRGFVF_					0	0	0		nc|ENSG00000088387|Q9BZ29-6|DOCK9;DOCK9|p.T1572Kfs*7|1|0.17|ENSG00000088387|chr13:98829485-98829488|TTGG/-|frameshift_variant;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9	nc|ENSG00000088387|Q9BZ29-6|DOCK9	nc|ENSG00000088387|Q9BZ29-6|DOCK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2686035037041	2	560.268227	1118.5219	2.5273	0.001416	-1.4187	-0.00079486	1.1086	0.00062111	560.2675450280368	63.421	0.48939	64.835	64.596	65.085	1.4134					32	15	3	0	0	0	0.10376	2	26618	26569;26618		59.368	21.394	1	2977300			33706	425	16599	16672	39313;39314	39314					-0.03261885945880749
TFMDRGFVF	9	Unmodified	_TFMDRGFVF_					0	0	0		nc|ENSG00000088387|Q9BZ29-6|DOCK9;DOCK9|p.T1572Kfs*7|1|0.17|ENSG00000088387|chr13:98829485-98829488|TTGG/-|frameshift_variant;nc|ENSG00000088387|Q9BZ29-3|DOCK9;nc|ENSG00000088387|Q9BZ29-5|DOCK9;nc|ENSG00000088387|Q9BZ29|DOCK9;ENSG00000088387|ENST00000682017|DOCK9;nc|ENSG00000088387|Q9BZ29-4|DOCK9	nc|ENSG00000088387|Q9BZ29-6|DOCK9	nc|ENSG00000088387|Q9BZ29-6|DOCK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2693359255791	2	560.268227	1118.5219	2.3946	0.0013416	-0.94905	-0.00053172	1.4456	0.00080991	560.2676722376034	62.899	0.55532	64.843	64.597	65.152	1.9444					28	17	2	0	0	0	0.082239	2	26378	26331;26378		59.368	28.732	1	2446200			33707	425	16599	16672	39315;39316	39316					-0.03261885945880749
TFNELIGAVR	10	Unmodified	_TFNELIGAVR_					0	0	0		tr|A0A7D6W0K3|A0A7D6W0K3_9CLOTATP-dependenthelicase/deoxyribonucleasesubunitBOS=ClostridiumintestinaleOX=36845GN=addBPE=3SV=1	tr|A0A7D6W0K3|A0A7D6W0K3_9CLOTATP-dependenthelicase/deoxyribonucleasesubunitBOS=ClostridiumintestinaleOX=36845GN=addBPE=3SV=1	tr|A0A7D6W0K3|A0A7D6W0K3_9CLOTATP-dependenthelicase/deoxyribonucleasesubunitBOS=ClostridiumintestinaleOX=36845GN=addBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3135864138603	2	560.31148	1118.60841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.166	1	45.166	44.666	45.666	0								0	0	0	0.65926	1	18900	18900		5.7319	0	1				33708	17013	16600	16673	39317	39317					0.053848168803369845
TFPNKKIAK	9	Unmodified	_TFPNKKIAK_					0	0	0		tr|A0A7D6VX77|A0A7D6VX77_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07365PE=4SV=1	tr|A0A7D6VX77|A0A7D6VX77_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07365PE=4SV=1	tr|A0A7D6VX77|A0A7D6VX77_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.8213378787041	2	523.821484	1045.62842	2.162	0.0011325	-2.4513	-0.0012841	-0.28938	-0.00015158	523.8201995284138	81.044	0.98591	81.044	80.541	81.527	0					69	31	3	0	0	0	0.8432	1	33734	33734		1.4819	0.68827	1	1898400			33709	16981	16601	16674	39318	39318					0.10742612610920332
TFQMKFFYI	9	Unmodified	_TFQMKFFYI_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1;ENSG00000174599|ENST00000310754|TRAM1L1	nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000174599|ENST00000310754|TRAM1L1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.8105346560478	2	612.809728	1223.6049	2.3663	0.0014501	1.8172	0.0011136	4.1835	0.0025637	612.8108658192697	78.002	0.38647	79.283	79.077	79.464	1.2809					26	12	3	0	0	0	0.081597	1	32745	32745		55.503	30.103	1	1604900			33710	820;4334	16602	16675	39319	39319					0.0020443078212792898
TFQMKFFYI	9	Unmodified	_TFQMKFFYI_					0	0	0		nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000067167|ENST00000262213|TRAM1;ENSG00000174599|ENST00000310754|TRAM1L1	nc|ENSG00000067167|Q15629-2|TRAM1;ENSG00000174599|ENST00000310754|TRAM1L1	nc|ENSG00000067167|Q15629-2|TRAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8106567263603	2	612.809728	1223.6049	1.0801	0.00066191	4.4048	0.0026993	5.4849	0.0033612	612.8123357249547	77.428	0.45935	79.179	78.977	79.437	1.7514					23	14	3	0	0	0	0.10473	1	32483	32483		47.749	22.349	1	1775000			33711	820;4334	16602	16675	39320	39320					0.0020443078212792898
TFRRWHRKRRK	11	Unmodified	_TFRRWHRKRRK_					0	0	0		ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	ENST00000416673.6_1_2:114369763-114384446:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	814.4680053591728	2	813.987458	1625.96036	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.941	1	96.343	95.843	96.843	0.40208								0	0	0	0.63775	1	40361	40361		0	0	1				33712	6411	16603	16676	39321	39321					0.17242130138811262
TFRYIRIL	8	Unmodified	_TFRYIRIL_					0	0	0			REV__ENST00000574285.2_1_16:9197349-9197592:+|nuORF	REV__ENST00000574285.2_1_16:9197349-9197592:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	361.2219421267509	3	361.222076	1080.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.8	1	106.85	106.35	107.35	0.052452								0	0	0	1.0178	1	45572	45572		1.6526	0	1		+		33713	13978	16604	16677	39322	39322					0.1073031884784541
TFRYWRRFIYY	11	Unmodified	_TFRYWRRFIYY_					0	0	0			REV__tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	REV__tr|A0A7D6VSH2|A0A7D6VSH2_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06695PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	835.9351684451103	2	835.93316	1669.85177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.224	1	98.452	97.952	98.952	0.22776								0	0	0	0.63775	1	41340	41340		0	0	1		+		33714	15447	16605	16678	39323	39323					0.04363481325231078
TFSDVTFKL	9	Unmodified	_TFSDVTFKL_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2818481326103	2	529.281857	1056.54916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.701	1	57.111	56.611	57.611	1.4099								0	0	0	0.052667	1	23339	23339		43.858	26.916	1				33715	883	16606	16679	39324	39324					0.02314920866160719
TFSKEYHI	8	Unmodified	_TFSKEYHI_					0	0	0		IDO1|p.I11F|1|0.27|ENSG00000131203|chr8:39913953-39913953|A/T|missense_variant	IDO1|p.I11F|1|0.27|ENSG00000131203|chr8:39913953-39913953|A/T|missense_variant	IDO1|p.I11F|1|0.27|ENSG00000131203|chr8:39913953-39913953|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	512.2988769412041	2	512.758549	1023.50255	2.4102	0.0012358	-1.0306	-0.00052845	1.3796	0.00070739	512.7584702880715	50.515	0.15429	51.909	51.831	51.986	1.3938					6	4	2	0	0	0	2.3239	1	21168	21168		8.5933	0	1	305230			33716	7654	16607	16680	39325	39325					-0.008265189651524452
TFSQSQGLVI	10	Unmodified	_TFSQSQGLVI_					0	0	0		nc|ENSG00000175727|Q9HAP2-2|MLXIP;ENSG00000175727|ENST00000319080|MLXIP;IFT57-MLXIP|1|fusion;nc|ENSG00000175727|Q9HAP2-5|MLXIP;nc|ENSG00000175727|Q9HAP2-4|MLXIP;nc|ENSG00000175727|Q9HAP2-3|MLXIP	nc|ENSG00000175727|Q9HAP2-2|MLXIP	nc|ENSG00000175727|Q9HAP2-2|MLXIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2908203005791	2	540.290214	1078.56587	2.108	0.0011389	0.2305	0.00012454	2.3385	0.0012635	540.2901480171704	46.886	0.54025	48.268	47.964	48.504	1.3825					39	16	3	0	0	0	0.57775	1	19580	19580		24.021	2.2739	1	1767700			33717	4382	16608	16681	39326	39326					0.029734217520854145
TFSSSLSLSG	10	Unmodified	_TFSSSLSLSG_					0	0	0		ENST00000380243.8_2_14:99980527-99980686:-|nuORF	ENST00000380243.8_2_14:99980527-99980686:-|nuORF	ENST00000380243.8_2_14:99980527-99980686:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	985.4844238162041	1	985.483667	984.476391	1.2399	0.0012219	1.5051	0.0014832	2.745	0.0027051	985.4850441041029	29.686	0.37014	29.686	29.484	29.854	0					23	11	3	0	0	0	0.6819	1	12401	12401		19.257	0	1	2697400			33718	6222	16609	16682	39327	39327					-0.016468329272584015
TFTFSHATF	9	Unmodified	_TFTFSHATF_					0	0	0		ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7524291872978	2	529.750724	1057.4869	1.7083	0.00090497	0.56055	0.00029695	2.2689	0.0012019	529.7511867506778	46.018	0.47054	47.393	47.116	47.586	1.3751					45	14	4	0	0	0	0.00020592	4	19260	19222;19260;19299;19344		141.83	66.898	1	10031000			33719	5159	16610	16683	39328;39329;39330;39331	39329					-0.03954805482203483
TFTFSHATF	9	Unmodified	_TFTFSHATF_					0	0	0		ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	ENSG00000204713|ENST00000377199|TRIM27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7519409060478	2	529.750724	1057.4869	1.7042	0.00090283	0.36888	0.00019541	2.0731	0.0010982	529.7510041529549	45.501	0.50955	47.461	47.207	47.716	1.9596					45	15	4	0	0	0	0.00020592	4	19046	19008;19046;19085;19133		141.83	83.148	1	8289000			33720	5159	16610	16683	39332;39333;39334;39335	39333					-0.03954805482203483
TFTIIKLVTGF	11	Unmodified	_TFTIIKLVTGF_					0	0	0			REV__ENST00000586944.5_1_19:797434-805231:+|nuORF	REV__ENST00000586944.5_1_19:797434-805231:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.8704711794853	2	620.371007	1238.72746	1.3689	0.00084924	1.6391	0.0010169	3.008	0.0018661	620.3726481470236	79.343	0.55766	81.078	80.814	81.371	1.735					26	17	2	0	0	0	0.14606	1	33305	33305		5.7319	4.0792	1	972040	+		33721	8534	16611	16684	39336	39336					0.11764590785173823
TFTPTVWSL	9	Unmodified	_TFTPTVWSL_					0	0	0			REV__CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant	REV__CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2794677615166	2	526.276575	1050.5386	0.84372	0.00044403	-2.8898	-0.0015208	-2.0461	-0.0010768	526.2742519083278	53.341	0.28796	54.742	54.506	54.794	1.4005					16	11	2	0	0	0	0.10993	1	22282	22282		46.021	6.0636	1	4483900	+		33722	8199	16612	16685	39337	39337					0.015349382117165078
TFVAQLWTFHP	11	Unmodified	_TFVAQLWTFHP_					0	0	0			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	673.8479492068291	2	673.84823	1345.68191	2.1005	0.0014154	-2.1465	-0.0014464	-0.046022	-3.1012E-05	673.846850112492	56.532	0.38116	56.532	56.371	56.752	0					34	12	4	0	0	0	0.22376	2	23545	23545;23589		38.176	17.761	1	9767300	+		33723	11953	16613	16686	39338;39339	39338					0.022893653227811228
TFVAQLWTFHP	11	Unmodified	_TFVAQLWTFHP_					0	0	0			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	674.3470336794853	2	673.84823	1345.68191	2.0963	0.0014126	-3.3433	-0.0022528	-1.247	-0.00084027	673.8464229240964	56.142	0.30907	56.463	56.307	56.617	0.3209					27	10	3	0	0	0	0.46674	1	23517	23517		24.991	11.948	1	3104700	+		33724	11953	16613	16686	39340	39340					0.022893653227811228
TFVAQLWTFHP	11	Unmodified	_TFVAQLWTFHP_					0	0	0			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	673.84823	1345.68191	2.1005	0.0014154	-2.1465	-0.0014464	-0.046022	-3.1012E-05	673.846850112492	56.532	0.38116	56.532	56.371	56.752	0	0.0142	0.00095883	NaN	38.176	34	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9767300	+		33725	11953	16613	16686							0.022893653227811228
TFVAQLWTFHP	11	Unmodified	_TFVAQLWTFHP_					0	0	0			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	673.84823	1345.68191	2.0963	0.0014126	-3.3433	-0.0022528	-1.247	-0.00084027	673.8464229240964	56.142	0.30907	56.463	56.307	56.617	0.3209	-0.054019	-0.00065404	NaN	38.176	27	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3104700	+		33726	11953	16613	16686							0.022893653227811228
TFVAQLWTFHP	11	Unmodified	_TFVAQLWTFHP_					0	0	0			REV__ENSG00000253117|ENST00000254627|OC90	REV__ENSG00000253117|ENST00000254627|OC90	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	673.84823	1345.68191	1.3031	0.00087812	-3.3522	-0.0022589	-2.0491	-0.0013808	673.8470864883651	54.589	0.14326	56.557	56.467	56.61	1.9684	0.03982	-0.00066613	NaN	38.176	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1472700	+		33727	11953	16613	16686							0.022893653227811228
TFWVQKRP	8	Unmodified	_TFWVQKRP_					0	0	0		ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant;nc|ENSG00000070961|P20020-5|ATP2B1;nc|ENSG00000070961|P20020-2|ATP2B1;nc|ENSG00000070961|P20020-6|ATP2B1;ENSG00000070961|ENST00000428670|ATP2B1;nc|ENSG00000070961|P20020-4|ATP2B1;nc|ENSG00000070961|P20020-1|ATP2B1	ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant	ATP2B1|p.N713Ifs*22|1|0.46|ENSG00000070961|chr12:89611302-89611302|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.7231933474541	2	531.298176	1060.5818	2.3184	0.0012318	-0.33205	-0.00017642	1.9864	0.0010554	531.2978436491659	90.188	0.38258	90.188	90	90.382	0					17	11	2	0	0	0	2.3239	1	37645	37645		0.69038	0	1	1141600			33728	89	16614	16687	39341	39341					0.05393172779668021
TGACREQRVR	10	Unmodified	_TGACREQRVR_					0	0	0		ENST00000600353.1_1_19:58446215-58446374:-|nuORF	ENST00000600353.1_1_19:58446215-58446374:-|nuORF	ENST00000600353.1_1_19:58446215-58446374:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3074218630791	2	588.306738	1174.59892	0.27809	0.0001636	-1.2845	-0.00075568	-1.0064	-0.00059208	588.3061657035213	16.385	0.085564	16.515	16.445	16.531	0.13022					4	2	2	0	0	0	0.8325	1	6805	6805		8.7454	0.58988	1	257860			33729	7537	16615	16688	39342	39342					0.018607253231493814
TGAHHGPG	8	Unmodified	_TGAHHGPG_					0	0	0		ENSG00000163395|ENST00000335211|IGFN1;IGFN1|p.C894Vfs*30|1|0.1|ENSG00000163395|chr1:201221591-201221592|-/G|frameshift_variant;IGFN1|p.G1182Pfs*78|1|0.22|ENSG00000163395|chr1:201227009-201227010|-/CCTGTACTGGCATCCTCTGCACCCCTGACCTCCGT|frameshift_variant	ENSG00000163395|ENST00000335211|IGFN1	ENSG00000163395|ENST00000335211|IGFN1	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.2305175662041	2	367.172444	732.330336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.546	1	46.877	46.377	47.377	0.33034								0	0	0	1.0178	1	19530	19530		0.69038	0	1				33730	3676	16616	16689	39343	39343					-0.046536258619880755
TGARKHFLPG	10	Unmodified	_TGARKHFLPG_					0	0	0		ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.2667724490166	2	542.306532	1082.59851	0.84991	0.00046091	-2.0668	-0.0011208	-1.2169	-0.00065992	542.3056462092809	56.79	0.38662	58.758	58.516	58.903	1.9684					18	12	2	0	0	0	0.1245	1	23833	23833		10.824	0	1	1459000			33731	7387	16617	16690	39344	39344					0.06051673665592716
TGCCCCCC	8	Unmodified	_TGCCCCCC_					0	0	0		ENST00000379661.7_1_16:57770947-57770980:+|nuORF;ENST00000566726.5_1_16:57770947-57775680:+|nuORF;ENST00000562592.5_1_16:57770947-57775680:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.0731078982353	2	398.074683	794.134814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.647	1	98.647	98.147	99.147	0								0	0	0	1.0178	1	41264	41264		0	0	1				33732	6216	16618	16691	39345	39345					-0.270488263525408
TGCCCCCC	8	Unmodified	_TGCCCCCC_					0	0	0		ENST00000379661.7_1_16:57770947-57770980:+|nuORF;ENST00000566726.5_1_16:57770947-57775680:+|nuORF;ENST00000562592.5_1_16:57770947-57775680:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.0750610232353	2	398.074683	794.134814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.827	1	95.951	95.451	96.451	0.12331								0	0	0	1.0178	1	40106	40106		0	0	1				33733	6216	16618	16691	39346	39346					-0.270488263525408
TGCCCCCC	8	Unmodified	_TGCCCCCC_					0	0	0		ENST00000379661.7_1_16:57770947-57770980:+|nuORF;ENST00000566726.5_1_16:57770947-57775680:+|nuORF;ENST00000562592.5_1_16:57770947-57775680:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	398.0759765505791	2	398.074683	794.134814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.148	1	95.569	95.069	96.069	0.4212								0	0	0	1.0178	1	40032	40032		0	0	1				33734	6216	16618	16691	39347	39347					-0.270488263525408
TGCCCCCC	8	Unmodified	_TGCCCCCC_					0	0	0		ENST00000379661.7_1_16:57770947-57770980:+|nuORF;ENST00000566726.5_1_16:57770947-57775680:+|nuORF;ENST00000562592.5_1_16:57770947-57775680:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	ENST00000379661.7_1_16:57770947-57770980:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	398.0753051638603	2	398.074683	794.134814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.913	1	96.102	95.602	96.602	1.1887								0	0	0	1.0178	1	39932	39932		0	0	1				33735	6216	16618	16691	39348	39348					-0.270488263525408
TGCMGHCH	8	Unmodified	_TGCMGHCH_					0	0	0		tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.1461669802666	2	423.1462	844.277848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.874	1	18.874	18.374	19.374	0								0	0	0	1.0178	1	7844	7844		0.79363	0	1				33736	16311	16619	16692	39349	39349					-0.1505199158314099
TGCMGHCH	8	Unmodified	_TGCMGHCH_					0	0	0		tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	tr|A0A553SKV7|A0A553SKV7_NIACISporephotoproductlyaseOS=NialliacirculansOX=1397GN=splBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.1473876833916	2	423.1462	844.277848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.529	1	21.529	21.029	22.029	0								0	0	0	1.0178	1	8953	8953		0.79363	0	1				33737	16311	16619	16692	39350	39350					-0.1505199158314099
TGDGHCEA	8	Unmodified	_TGDGHCEA_					0	0	0			REV__ENST00000464395.1_1_10:3185767-3189991:-|nuORF	REV__ENST00000464395.1_1_10:3185767-3189991:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	395.1453735232353	2	395.145235	788.275917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.11	1	104.17	103.67	104.67	0.059502								0	0	0	1.0178	1	43843	43843		0.69038	0	1		+		33738	13225	16620	16693	39351	39351					-0.12669005795737576
TGDNWKFI	8	Unmodified	_TGDNWKFI_					0	0	0		ENST00000493430.5_1_2:86358220-86360412:+|nuORF;ENST00000476215.5_1_2:86355098-86359545:+|nuORF;ENST00000469585.5_1_2:86355098-86362111:+|nuORF;ENST00000487043.5_1_2:86355098-86363686:+|nuORF;nc|ENSG00000132300|Q96EY7-2|PTCD3;ENSG00000132300|ENST00000254630|PTCD3	ENST00000493430.5_1_2:86358220-86360412:+|nuORF	ENST00000493430.5_1_2:86358220-86360412:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	490.7497131228447	2	490.745442	979.476331	2.8193	0.0013836	2.9444	0.001445	5.7638	0.0028285	490.7467150197654	63.512	0.31321	65.457	65.377	65.69	1.9444					17	9	2	0	0	0	0.76844	1	26652	26652		24.021	4.7636	1	1489000			33739	2523	16621	16694	39352	39352					-0.014227881366082329
TGDPTLLEL	9	Unmodified	_TGDPTLLEL_					0	0	0		nc|ENSG00000088298|Q9BV94-2|EDEM2;ENSG00000088298|ENST00000374492|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	958.5123168826103	1	958.509154	957.501877	1.7993	0.0017247	0.50605	0.00048505	2.3054	0.0022097	958.509811721892	63.981	0.44784	65.388	65.174	65.622	1.4071					32	13	3	0	0	0	0.037761	1	26846	26846		78.149	10.806	1	8848800			33740	1098	16622	16695	39353	39353					0.02142641595139594
TGDPTLLEL	9	Unmodified	_TGDPTLLEL_					0	0	0		nc|ENSG00000088298|Q9BV94-2|EDEM2;ENSG00000088298|ENST00000374492|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	958.5119506716728	1	958.509154	957.501877	2.7647	0.00265	-0.23614	-0.00022634	2.5285	0.0024236	958.5089312731301	63.482	0.44381	65.426	65.216	65.66	1.9444					26	13	2	0	0	0	0.033794	3	26598	26598;26637;26676		81.613	7.1903	1	7268200			33741	1098	16622	16695	39354;39355;39356	39354					0.02142641595139594
TGDPTLLEL	9	Unmodified	_TGDPTLLEL_					0	0	0		nc|ENSG00000088298|Q9BV94-2|EDEM2;ENSG00000088298|ENST00000374492|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	nc|ENSG00000088298|Q9BV94-2|EDEM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7585327029228	2	479.758215	957.501877	2.6039	0.0012492	-3.0973	-0.001486	-0.49342	-0.00023672	479.7566771268918	63.512	0.22133	65.457	65.377	65.598	1.9444					9	6	2	0	0	0	0.083604	1	26643	26643		54.774	6.4277	1	2710700			33742	1098	16622	16695	39357	39357					0.02142641595139594
TGDQLSLR	8	Unmodified	_TGDQLSLR_					0	0	0			REV__nc|ENSG00000054654|Q8WXH0|SYNE2	REV__nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1201049685478	2	445.240524	888.466495	0.62863	0.00027989	0.28772	0.0001281	0.91635	0.00040799	445.2408066340331	16.964	0.3556	17.862	17.758	18.113	0.89794					26	11	3	0	0	0	2.3239	1	7051	7051		7.2892	0	1	2842800	+		33743	8632	16623	16696	39358	39358					0.01780023858009372
TGFFHEYDTFF	11	Unmodified	_TGFFHEYDTFF_					0	0	0			REV__tr|A0A553SF89|A0A553SF89_NIACIPeptidaseC45OS=NialliacirculansOX=1397GN=CEQ21_08450PE=4SV=1	REV__tr|A0A553SF89|A0A553SF89_NIACIPeptidaseC45OS=NialliacirculansOX=1397GN=CEQ21_08450PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	470.1754638552666	3	470.871549	1409.59282	1.5854	0.0007465	-0.28601	-0.00013467	1.2994	0.00061183	470.87139955934197	26.209	0.2086	26.209	26.148	26.357	0					11	6	2	0	0	0	0.14606	1	10957	10957		0.45452	0	1	348910	+		33744	14696	16624	16697	39359	39359					-0.09559514427405702
TGFHLPDSL	9	Unmodified	_TGFHLPDSL_					0	0	0		ENST00000315732.2_1_1:36859143-36859281:-|nuORF	ENST00000315732.2_1_1:36859143-36859281:-|nuORF	ENST00000315732.2_1_1:36859143-36859281:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7524291872978	2	493.750724	985.486896	2.7858	0.0013755	0.68055	0.00033602	3.4663	0.0017115	493.75108157015666	80.744	0.45092	81.977	81.742	82.193	1.2332					39	14	4	0	0	0	0.13873	1	33918	33918		39.957	6.5124	1	13866000			33745	5826	16625	16698	39360	39360					-0.006428054821981277
TGGDDGDDDG	10	Unmodified	_TGGDDGDDDG_					0	0	0			REV__nc|ENSG00000152583|Q14515-2|SPARCL1	REV__nc|ENSG00000152583|Q14515-2|SPARCL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1472045779228	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.347	1	51.741	51.241	52.241	1.3938								0	0	0	0.66237	1	21072	21072		0.45834	0.45834	1		+		33746	10426	16626	16699	39361	39361					-0.18543503927890015
TGGDDGDDDG	10	Unmodified	_TGGDDGDDDG_					0	0	0			REV__nc|ENSG00000152583|Q14515-2|SPARCL1	REV__nc|ENSG00000152583|Q14515-2|SPARCL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.1464416384697	2	462.146683	922.278813	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.506	1	51.9	51.4	52.4	1.3938								0	0	0	0.66237	1	21139	21139		0.45834	0.45834	1		+		33747	10426	16626	16699	39362	39362					-0.18543503927890015
TGGKSGGN	8	Unmodified	_TGGKSGGN_					0	0	0		ENST00000351010.6_1_5:149602275-149624861:-|nuORF	ENST00000351010.6_1_5:149602275-149624861:-|nuORF	ENST00000351010.6_1_5:149602275-149624861:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.2714416384697	2	339.164285	676.314017	2.2519	0.00076377	-0.97869	-0.00033194	1.2732	0.00043184	339.1642631204726	108.54	0.083664	108.59	108.55	108.64	0.050644					5	3	2	0	0	0	2.3239	1	46688	46688		0	0	1	3652300			33748	5970	16627	16700	39363	39363					-0.03708751818771816
TGGLYVQHDV	10	Unmodified	_TGGLYVQHDV_					0	0	0		tr|A0A553SGQ2|A0A553SGQ2_NIACILipoproteinOS=NialliacirculansOX=1397GN=CEQ21_11290PE=4SV=1	tr|A0A553SGQ2|A0A553SGQ2_NIACILipoproteinOS=NialliacirculansOX=1397GN=CEQ21_11290PE=4SV=1	tr|A0A553SGQ2|A0A553SGQ2_NIACILipoproteinOS=NialliacirculansOX=1397GN=CEQ21_11290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7756835818291	2	544.772188	1087.52982	2.876	0.0015668	-2.1572	-0.0011752	0.71887	0.00039162	544.7743842871917	74.926	0.85915	76.232	75.756	76.615	1.3063					78	27	5	0	0	0	0.28905	1	31526	31526		39.95	1.9757	1	11432000			33749	16117	16628	16701	39364	39364					-0.010440354247748473
TGGRGLHF	8	Unmodified	_TGGRGLHF_					0	0	0			REV__ENST00000275300.2_1_6:160857882-160858157:+|nuORF	REV__ENST00000275300.2_1_6:160857882-160858157:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.7251769900322	2	422.724844	843.435135	2.2772	0.00096265	0.38103	0.00016107	2.6583	0.0011237	422.7250387845985	44.181	0.2822	46.125	45.957	46.239	1.9438					12	8	2	0	0	0	0.88958	1	18536	18536		2.8892	0	1	506130	+		33750	12245	16629	16702	39365	39365					0.007154956145654978
TGGRGLHF	8	Unmodified	_TGGRGLHF_					0	0	0			REV__ENST00000275300.2_1_6:160857882-160858157:+|nuORF	REV__ENST00000275300.2_1_6:160857882-160858157:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	422.7255126833916	2	422.724844	843.435135	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.415	1	47.375	46.875	47.875	1.9596								0	0	0	1.0178	1	19029	19029		2.8892	0	1		+		33751	12245	16629	16702	39366	39366					0.007154956145654978
TGGSSSDC	8	Unmodified	_TGGSSSDC_					0	0	0			REV__chr8:143821913-143822235|90|23.42|0.02|9.88|-|0|PUF60,None|1	REV__chr8:143821913-143822235|90|23.42|0.02|9.88|-|0|PUF60,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.1231872439384	2	357.123968	712.233383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.354	1	21.354	20.854	21.854	0								0	0	0	1.0178	1	8879	8879		0	0	1		+		33752	8343	16630	16703	39367	39367					-0.134244009239751
TGIAGPLG	8	Unmodified	_TGIAGPLG_					0	0	0			REV__COL5A2|p.K1261Rfs*17|1|0.16|ENSG00000204262|chr2:189039415-189039416|-/C|frameshift_variant	REV__COL5A2|p.K1261Rfs*17|1|0.16|ENSG00000204262|chr2:189039415-189039416|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.3918334841728	1	685.387916	684.38064	1.449	0.00099313	3.8136	0.0026138	5.2626	0.003607	685.3898579360686	108.08	0.19028	108.08	107.97	108.16	0					22	9	3	0	0	0	0.89178	1	46478	46478		0.69038	0	1	124300000	+		33753	8369	16631	16704	39368	39368					0.025824837431514425
TGIAGPLG	8	Unmodified	_TGIAGPLG_					0	0	0			REV__COL5A2|p.K1261Rfs*17|1|0.16|ENSG00000204262|chr2:189039415-189039416|-/C|frameshift_variant	REV__COL5A2|p.K1261Rfs*17|1|0.16|ENSG00000204262|chr2:189039415-189039416|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	685.387916	684.38064	1.449	0.00099313	3.8136	0.0026138	5.2626	0.003607	685.3898579360686	108.08	0.19028	108.08	107.97	108.16	0	-0.033805	0.00071426	NaN	0.69038	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	124300000	+		33754	8369	16631	16704							0.025824837431514425
TGIKKGPP	8	Unmodified	_TGIKKGPP_					0	0	0		ENSG00000211450|ENST00000534355|SELENOH	ENSG00000211450|ENST00000534355|SELENOH	ENSG00000211450|ENST00000534355|SELENOH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2474853396416	2	399.247621	796.480688	0.59239	0.00023651	-1.0097	-0.00040313	-0.41733	-0.00016662	399.2473560083675	62.431	0.93277	62.431	61.993	62.926	0					58	29	4	0	0	0	0.88663	1	25985	25985		4.756	0	1	8393800			33755	5203	16632	16705	39369	39369					0.07430721076957525
TGIKKGPP	8	Unmodified	_TGIKKGPP_					0	0	0		ENSG00000211450|ENST00000534355|SELENOH	ENSG00000211450|ENST00000534355|SELENOH	ENSG00000211450|ENST00000534355|SELENOH	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	399.247621	796.480688	2.7519	0.0010987	-1.6462	-0.00065726	1.1056	0.00044141	399.24715093882276	60.87	1.0846	62.835	62.324	63.409	1.9653	0.20426	0.00011583	NaN	4.756	57	34	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7556300			33756	5203	16632	16705							0.07430721076957525
TGIVLLLPLL	10	Unmodified	_TGIVLLLPLL_					0	0	0			REV__ENSG00000204913|ENST00000377924|LRRC3C	REV__ENSG00000204913|ENST00000377924|LRRC3C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2432739138603	3	351.242366	1050.70527	0.41649	0.00014629	2.4862	0.00087327	2.9027	0.0010196	351.243198218401	23.418	0.68784	23.651	23.346	24.033	0.23306					40	21	2	0	0	0	0.89803	1	9875	9875		0.13989	0	1	455340	+		33757	11805	16633	16706	39370	39370					0.18194411107424457
TGKEHIII	8	Unmodified	_TGKEHIII_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.7729980349541	2	455.77146	909.528367	1.8198	0.00082941	1.0311	0.00046996	2.8509	0.0012994	455.77177188325294	48.287	0.25157	49.675	49.552	49.804	1.388					12	7	2	0	0	0	0.66196	1	20214	20214		34.102	3.8776	1	840490			33758	3425;7900	16634	16707	39371	39371					0.06998375277146351
TGKFLKRF	8	Unmodified	_TGKFLKRF_					0	0	0		BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	332.8726379275322	3	332.871155	995.591636	0.61603	0.00020506	2.038	0.0006784	2.6541	0.00088346	332.8720230017161	38.789	0.54534	40.085	39.805	40.35	1.2961					68	17	5	0	0	0	0.89008	1	16289	16289		1.6526	0	1	343560000			33759	103	16635	16708	39372	39372					0.09366360785043071
TGKFLKRF	8	Unmodified	_TGKFLKRF_					0	0	0		BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant;nc|ENSG00000029363|Q9NYF8-3|BCLAF1;nc|ENSG00000029363|Q9NYF8-2|BCLAF1;ENSG00000029363|ENST00000531224|BCLAF1	BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8719055056572	3	332.871155	995.591636	0.393	0.00013082	2.0233	0.00067351	2.4163	0.00080433	332.87203643665947	38.016	0.52402	39.836	39.701	40.225	1.8202					69	16	5	0	0	0	0.89008	1	16039	16039		1.6526	0	1	258050000			33760	103	16635	16708	39373	39373					0.09366360785043071
TGLELLGG	8	Unmodified	_TGLELLGG_					0	0	0		ENSG00000135519|ENST00000257981|KCNH3	ENSG00000135519|ENST00000257981|KCNH3	ENSG00000135519|ENST00000257981|KCNH3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2177612185478	2	380.215986	758.417419	0.42024	0.00015978	3.6216	0.001377	4.0419	0.0015368	380.21728529081764	26.691	0.85982	28.438	28.129	28.988	1.747					70	28	3	0	0	0	0.89051	1	11227	11227		2.3027	0	1	15550000			33761	2671	16636	16709	39374	39374					0.02854735569053446
TGLRGAPW	8	Unmodified	_TGLRGAPW_					0	0	0		chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2370788455009	2	429.235045	856.455536	2.1745	0.00093338	3.6686	0.0015747	5.8431	0.0025081	429.236573825833	53.449	0.84007	53.772	53.29	54.13	0.32283					69	26	3	0	0	0	0.88055	2	22392	22392;22430		8.5933	0	1	13415000			33762	233	16637	16710	39375;39376	39375					0.02156666274379404
TGLRGAPW	8	Unmodified	_TGLRGAPW_					0	0	0		chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	429.2358886599541	2	429.235045	856.455536	1.0917	0.00046858	2.6467	0.0011361	3.7384	0.0016046	429.2360477129313	52.075	0.7925	53.471	53.012	53.804	1.3966					54	26	4	0	0	0	0.88055	2	21781	21781;21820		8.5933	0	1	11702000			33763	233	16637	16710	39377;39378	39377					0.02156666274379404
TGLRGAPW	8	Unmodified	_TGLRGAPW_					0	0	0		chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	chr19:54163159-54164434|187|29.03|0.53|5.77|-|1|TMC4,TMC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	429.2355834841728	2	429.235045	856.455536	0.39655	0.00017021	1.9832	0.00085126	2.3798	0.0010215	429.2355718647136	51.404	0.51956	53.38	53.191	53.711	1.9753					44	18	3	0	0	0	0.88055	1	21535	21535		8.5933	0	1	16956000			33764	233	16637	16710	39379	39379					0.02156666274379404
TGLSKRQGK	9	Unmodified	_TGLSKRQGK_					0	0	0		tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7938110232353	2	487.790715	973.566878	2.6512	0.0012932	1.3806	0.00067344	4.0318	0.0019667	487.79142141632246	63.374	1.9768	64.787	64.045	66.022	1.4134					86	63	2	0	0	0	0.6486	1	26635	26635		9.3831	0.035688	1	1312000			33765	16393	16638	16711	39380	39380					0.07903680911670108
TGLSKRQGK	9	Unmodified	_TGLSKRQGK_					0	0	0		tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	tr|A0A553SMT9|A0A553SMT9_NIACINH(3)-dependentNAD(+)synthetaseOS=NialliacirculansOX=1397GN=nadEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7916442751884	2	487.790715	973.566878	2.4555	0.0011978	1.8593	0.00090696	4.3148	0.0021047	487.79151835946806	63.141	1.2421	65.086	64.167	65.409	1.9444					57	39	2	0	0	0	0.6486	1	26371	26371		9.3831	4.1525	1	1461900			33766	16393	16638	16711	39381	39381					0.07903680911670108
TGLVVPGD	8	Unmodified	_TGLVVPGD_					0	0	0			REV__nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	REV__nc|ENSG00000049769|Q6ZSY5-2|PPP1R3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.2089721560478	2	379.208161	756.401769	1.2878	0.00048834	1.3425	0.00050907	2.6303	0.00099742	379.20857232077435	34.787	0.37213	35.086	34.867	35.239	0.29942					47	20	3	0	0	0	0.89051	1	14613	14613		2.3027	0	1	24298000	+		33767	8618	16639	16712	39382	39382					0.013824490520050858
TGNAPGGGG	9	Unmodified	_TGNAPGGGG_					0	0	0			REV__SIPA1L2|p.V71Ifs*17|1|0.06|ENSG00000116991|chr1:232515130-232515131|-/AATCAAGTCTGAATTTGTGATGATCACAAATT|frameshift_variant	REV__SIPA1L2|p.V71Ifs*17|1|0.06|ENSG00000116991|chr1:232515130-232515131|-/AATCAAGTCTGAATTTGTGATGATCACAAATT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	344.2454406619072	2	344.15646	686.298367	-1.3603	-0.00046814	0.71547	0.00024623	-0.64479	-0.00022191	344.1562177159746	94.656	0.31077	94.656	94.486	94.796	0					11	9	2	0	0	0	0.11957	1	39544	39544		0	0	1	253560	+		33768	9487	16640	16713	39383	39383					-0.057330383357793835
TGPLCENPA	9	Unmodified	_TGPLCENPA_					0	0	0		NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant;ENSG00000074181|ENST00000263388|NOTCH3	NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant	NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1409789919853	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.35	1	115.49	114.99	115.99	0.14976								0	0	0	0.42693	1	49878	49878		0.26902	0	1				33769	910	16641	16714	39384	39384					-0.05306713659365414
TGPLCENPA	9	Unmodified	_TGPLCENPA_					0	0	0		NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant;ENSG00000074181|ENST00000263388|NOTCH3	NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant	NOTCH3|p.S696Efs*7|2|0.19|ENSG00000074181|chr19:15185546-15185547|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413146853447	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.53	1	115.68	115.18	116.18	0.14976								0	0	0	0.42693	1	49953	49953		0.26902	0	1				33770	910	16641	16714	39385	39385					-0.05306713659365414
TGPRHGKA	8	Unmodified	_TGPRHGKA_					0	0	0			REV__ENST00000262662.5_1_1:51434456-51434999:+|nuORF	REV__ENST00000262662.5_1_1:51434456-51434999:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2295410037041	2	412.230294	822.446034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.784	1	25.027	24.527	25.527	0.24251								0	0	0	1.0178	1	10345	10345		2.0598	0	1		+		33771	12200	16642	16715	39386	39386					0.02770897988852994
TGPTRFFLF	9	Unmodified	_TGPTRFFLF_					0	0	0		ENSG00000013588|ENST00000014914|GPRC5A;ENST00000537783.1_1_12:13044524-13062212:+|nuORF	ENSG00000013588|ENST00000014914|GPRC5A	ENSG00000013588|ENST00000014914|GPRC5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.2932006716728	2	543.292559	1084.57057	2.8837	0.0015667	-0.48679	-0.00026447	2.3969	0.0013022	543.2922216148378	70.342	0.66654	71.695	71.366	72.033	1.3536					49	20	3	0	0	0	0.014947	4	29499	29461;29499;29537;29582		103.42	45.948	1	17764000			33772	589	16643	16716	39387;39388;39389;39390	39388					0.03166350685501129
TGPTRFFLF	9	Unmodified	_TGPTRFFLF_					0	0	0		ENSG00000013588|ENST00000014914|GPRC5A;ENST00000537783.1_1_12:13044524-13062212:+|nuORF	ENSG00000013588|ENST00000014914|GPRC5A	ENSG00000013588|ENST00000014914|GPRC5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2940551638603	2	543.292559	1084.57057	2.7827	0.0015118	-0.64996	-0.00035312	2.1327	0.0011587	543.2920871409019	69.721	0.53893	71.559	71.278	71.817	1.8378					47	16	4	0	0	0	0.03071	4	29249	29200;29249;29288;29335		86.332	36.663	1	17609000			33773	589	16643	16716	39391;39392;39393;39394	39392					0.03166350685501129
TGPYVEIYL	9	Unmodified	_TGPYVEIYL_					0	0	0			REV__nc|ENSG00000166452|Q9NQ31-3|AKIP1	REV__nc|ENSG00000166452|Q9NQ31-3|AKIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7769042849541	2	527.776408	1053.53826	2.7967	0.001476	-1.2589	-0.00066439	1.5378	0.00081163	527.7760687007182	69.948	0.57286	71.786	71.468	72.041	1.8378					44	17	3	0	0	0	0.24063	1	29266	29266		28.487	0	1	3105800	+		33774	10825	16644	16717	39395	39395					0.013635184918257437
TGQELQPKGPV	11	Unmodified	_TGQELQPKGPV_					0	0	0			REV__LETM2|p.A96G|1|0.42|ENSG00000165046|chr8:38392781-38392781|C/G|missense_variant	REV__LETM2|p.A96G|1|0.42|ENSG00000165046|chr8:38392781-38392781|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3162719607353	2	577.31422	1152.61389	1.3321	0.00076903	3.059	0.001766	4.3911	0.002535	577.3162677571819	33.589	0.74027	33.589	33.174	33.914	0					38	23	3	0	0	0	0.46674	1	14110	14110		24.991	2.3329	1	2266500	+		33775	14350	16645	16718	39396	39396					0.043684956721335766
TGRGGAAT	8	Unmodified	_TGRGGAAT_					0	0	0		ENST00000310455.3_1_8:8998153-8998300:-|nuORF	ENST00000310455.3_1_8:8998153-8998300:-|nuORF	ENST00000310455.3_1_8:8998153-8998300:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	690.3505126833916	1	690.352928	689.345651	1.4417	0.00099528	-3.351	-0.0023134	-1.9093	-0.0013181	690.3505532132547	101.04	0.18469	101.04	100.94	101.12	0					8	5	2	0	0	0	0.89198	1	42311	42311		0	0	1	1983400			33776	5798	16646	16719	39397	39397					-0.011447590648231198
TGRRRRRLRRR	11	Unmodified	_TGRRRRRLRRR_					0	0	0		ZNRF3-PREPL|1|fusion;ZNRF3-MYOM3|1|fusion;ENSG00000183579|ENST00000544604|ZNRF3	ZNRF3-PREPL|1|fusion	ZNRF3-PREPL|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	769.9965087771416	2	769.993606	1537.97266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.373	1	84.561	84.061	85.061	1.1879								0	0	0	0.63775	1	34994	34994		0.30703	0.30703	1				33777	4656	16647	16720	39398	39398					0.22519166601887264
TGRSKLLLL	9	Unmodified	_TGRSKLLLL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8307983279228	2	500.829309	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.825	1	100.02	99.522	100.52	0.19767								0	0	0	0.3792	1	42019	42019		10.824	0	1				33778	3629	16648	16721	39399	39399					0.14422899128010158
TGVIKANI	8	Unmodified	_TGVIKANI_					0	0	0		tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1;tr|A0A553SNT9|A0A553SNT9_NIACIDNAtranslocaseFtsKOS=NialliacirculansOX=1397GN=CEQ21_25185PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	tr|A0A7D6VSW1|A0A7D6VSW1_9CLOTDNAtranslocaseFtsKOS=ClostridiumintestinaleOX=36845GN=HZF06_10740PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2519409060478	2	408.252903	814.491253	0.32193	0.00013143	-2.437	-0.0009949	-2.115	-0.00086347	408.25175950512426	68.596	0.50312	68.596	68.359	68.862	0					39	15	3	0	0	0	0.89008	1	28607	28607		2.5775	0	1	8659000			33779	16888	16649	16722	39400	39400					0.07658703731362948
TGVLRLILKLQ	11	Unmodified	_TGVLRLILKLQ_					0	0	0			REV__nc|ENSG00000112062|Q16539-5|MAPK14	REV__nc|ENSG00000112062|Q16539-5|MAPK14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	627.4197265505791	2	627.418823	1252.82309	1.5331	0.00096191	-1.3095	-0.0008216	0.22363	0.00014031	627.4188062394591	105.98	0.11852	105.98	105.93	106.05	0					16	5	4	0	0	0	1.0131	1	45115	45115		2.9952	1.3426	1	65457000	+		33780	9352	16650	16723	39401	39401					0.20679363696081055
TGVLRLILKLQ	11	Unmodified	_TGVLRLILKLQ_					0	0	0			REV__nc|ENSG00000112062|Q16539-5|MAPK14	REV__nc|ENSG00000112062|Q16539-5|MAPK14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.4200927615166	2	627.418823	1252.82309	2.7187	0.0017057	-2.9961	-0.0018798	-0.27744	-0.00017407	627.4173586877774	105.9	0.16025	106.06	105.97	106.13	0.16679					20	7	3	0	0	0	1.0131	1	45139	45139		2.9952	1.3426	1	275980000	+		33781	9352	16650	16723	39402	39402					0.20679363696081055
TGVRRKKK	8	Unmodified	_TGVRRKKK_					0	0	0			REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	REV__TAF1L|p.D1494Ifs*14|1|0.17|ENSG00000122728|chr9:32631100-32631100|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.6463500857353	1	972.642508	971.635232	2.9176	0.0028378	1.2121	0.0011789	4.1297	0.0040167	972.6434897246511	107.66	0.23687	107.82	107.68	107.92	0.15781					47	12	5	0	0	0	0.89178	1	46394	46394		0.69038	0	1	2833200000	+		33782	9612	16651	16724	39403	39403					0.14827970282181013
TGVVLAGP	8	Unmodified	_TGVVLAGP_					0	0	0			REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	357.2144042849541	2	357.213246	712.41194	1.2573	0.00044912	2.89	0.0010323	4.1472	0.0014814	357.2143831176343	37.828	0.52152	38.133	37.825	38.346	0.30497					77	22	5	0	0	0	0.89176	1	15827	15827		0.79363	0	1	385780000	+		33783	8357	16652	16725	39404	39404					0.044230567772387985
TGVVLAGP	8	Unmodified	_TGVVLAGP_					0	0	0			REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	357.213246	712.41194	-1.1576	-0.00041352	4.6005	0.0016434	3.4429	0.0012298	357.2148388962572	37.957	0.46423	37.957	37.69	38.154	0	0.03595	0.00024815	NaN	0.79363	52	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97930000	+		33784	8357	16652	16725							0.044230567772387985
TGVVLAGP	8	Unmodified	_TGVVLAGP_					0	0	0			REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	357.213246	712.41194	1.2573	0.00044912	2.89	0.0010323	4.1472	0.0014814	357.2143831176343	37.828	0.52152	38.133	37.825	38.346	0.30497	0.21278	-0.00097391	NaN	0.79363	77	22	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	385780000	+		33785	8357	16652	16725							0.044230567772387985
TGVVLAGP	8	Unmodified	_TGVVLAGP_					0	0	0			REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	REV__CIC|p.K921Rfs*3|1|0.16|ENSG00000079432|chr19:42291620-42291620|A/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	357.213246	712.41194	-1.0175	-0.00036345	4.2395	0.0015144	3.222	0.0011509	357.2147448882446	36.396	0.58593	37.672	37.359	37.945	1.2762	-0.24873	-9.7749E-06	NaN	0.79363	108	31	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	314100000	+		33786	8357	16652	16725							0.044230567772387985
TGYIRPDHGRM	11	Unmodified	_TGYIRPDHGRM_					0	0	0		tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1;tr|A0A553SHY3|A0A553SHY3_NIACIMannonatedehydrataseOS=NialliacirculansOX=1397GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8837158083916	3	434.883906	1301.62989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.703	1	51.703	51.203	52.203	0								0	0	0	0.63775	1	21564	21564		0.45452	0.1855	1				33787	16768	16653	16726	39405	39405					-0.008861213626232711
TGYIRPDHGRM	11	Unmodified	_TGYIRPDHGRM_					0	0	0		tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1;tr|A0A553SHY3|A0A553SHY3_NIACIMannonatedehydrataseOS=NialliacirculansOX=1397GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	tr|A0A7D6VPJ3|A0A7D6VPJ3_9CLOTMannonatedehydrataseOS=ClostridiumintestinaleOX=36845GN=uxuAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8833495974541	3	434.883906	1301.62989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.61	1	51.935	51.435	52.435	0.32553								0	0	0	0.63775	1	21620	21620		0.45452	0.1855	1				33788	16768	16653	16726	39406	39406					-0.008861213626232711
THDCPSFSTV	10	Unmodified	_THDCPSFSTV_					0	0	0			REV__HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|418|3|anti-sense	REV__HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|418|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.2350952029228	2	547.234581	1092.45461	3.4654	0.0018964	-3.3799	-0.0018496	0.085567	4.6825E-05	547.2330696244802	91.088	0.37595	92.454	92.28	92.656	1.366					27	11	3	0	0	0	0.82019	1	38366	38366		10.074	0	1	1328800	+		33789	14194	16654	16727	39407	39407					-0.08791960947519328
THFCSTIVI	9	Unmodified	_THFCSTIVI_					0	0	0			REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7644531130791	2	510.762778	1019.511	2.8241	0.0014424	-0.10107	-5.1623E-05	2.723	0.0013908	510.7612800723822	75.938	1.1847	77.232	76.361	77.546	1.2938					71	38	4	0	0	0	0.22519	2	31829	31829;31991		30.225	4.8255	1	6728500	+		33790	13258	16655	16728	39408;39409	39408					0.002027116798217321
THFCSTIVI	9	Unmodified	_THFCSTIVI_					0	0	0			REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7591125369072	2	510.762778	1019.511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.33	1	77.111	76.611	77.611	1.7817								0	0	0	0.24103	1	31597	31597		23.148	0.41214	1		+		33791	13258	16655	16728	39410	39410					0.002027116798217321
THFCSTIVI	9	Unmodified	_THFCSTIVI_					0	0	0			REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	REV__ENST00000468462.1_1_10:74994497-74994743:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7660400271416	2	510.762778	1019.511	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.561	1	77.343	76.843	77.843	1.7817								0	0	0	0.14418	1	31696	31696		30.225	3.9567	1		+		33792	13258	16655	16728	39411	39411					0.002027116798217321
THKLLCINR	9	Unmodified	_THKLLCINR_					0	0	0			REV__ENSG00000088926|ENST00000403665|F11	REV__ENSG00000088926|ENST00000403665|F11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	367.2695800662041	3	366.546454	1096.61753	2.3711	0.0008691	0.64787	0.00023747	3.0189	0.0011066	366.54656395296524	86.046	0.33236	86.298	86.13	86.462	0.25227					17	10	2	0	0	0	0.11944	1	35918	35918		0.96228	0	1	732400	+		33793	8878	16656	16729	39412	39412					0.07308886965006423
THLVTDHQHYW	11	Unmodified	_THLVTDHQHYW_					0	0	0		tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.8979675173759	3	479.561709	1435.6633	2.2844	0.0010955	1.6642	0.0007981	3.9486	0.0018936	479.5623863280928	48.293	0.78194	48.293	48.092	48.874	0					74	24	5	0	0	0	0.97491	1	20131	20131		2.4348	0.35082	1	3529900			33794	16629	16657	16730	39413	39413					-0.03710796319046494
THLVTDHQHYW	11	Unmodified	_THLVTDHQHYW_					0	0	0		tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.5639221072197	3	479.561709	1435.6633	2.5568	0.0012262	0.79314	0.00038036	3.35	0.0016065	479.5624189583528	47.522	0.41008	47.853	47.636	48.046	0.33034					37	13	4	0	0	0	1.0366	1	20007	20007		0.40827	0	1	3714800			33795	16629	16657	16730	39414	39414					-0.03710796319046494
THLVTDHQHYW	11	Unmodified	_THLVTDHQHYW_					0	0	0		tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	479.2911254763603	3	479.561709	1435.6633	1.4344	0.00068787	2.089	0.0010018	3.5234	0.0016897	479.5626784120889	45.55	0.4171	47.521	47.31	47.727	1.9703					25	12	3	0	0	0	0.14606	1	19114	19114		1.1098	0.74308	1	1323000			33796	16629	16657	16730	39415	39415					-0.03710796319046494
THLVTDHQHYW	11	Unmodified	_THLVTDHQHYW_					0	0	0		tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	tr|A0A553SSW4|A0A553SSW4_NIACISulfataseOS=NialliacirculansOX=1397GN=CEQ21_03910PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	479.561709	1435.6633	2.26	0.0010838	2.3229	0.001114	4.5828	0.0021978	479.56320928243133	47.567	0.22081	47.567	47.371	47.592	0	0.068106	0.00026757	NaN	1.1098	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323790			33797	16629	16657	16730							-0.03710796319046494
THRRRGGA	8	Unmodified	_THRRRGGA_					0	0	0		chr14:105248560-105248782|418|12.17|0.09|7.12|+|1|BTBD6,BTBD6|2	chr14:105248560-105248782|418|12.17|0.09|7.12|+|1|BTBD6,BTBD6|2	chr14:105248560-105248782|418|12.17|0.09|7.12|+|1|BTBD6,BTBD6|2	MSMS	GG20161007_CRH_Patient100_W632_02	4	304.1750671267509	3	304.17412	909.500529	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.32	1	103.5	103	104	0.18066								0	0	0	1.0178	1	43489	43489		0	0	1				33798	199	16658	16731	39416	39416					0.04215909860283773
THTRFWRRRLR	11	Unmodified	_THTRFWRRRLR_					0	0	0			REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	REV__ENST00000574110.5_1_19:30433210-30433438:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	528.9733154177666	3	528.97467	1583.90218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.932	1	18.932	18.432	19.432	0								0	0	0	0.63775	1	7868	7868		0.08335	0	1		+		33799	13976	16659	16732	39417	39417					0.13358448493568176
THVKARTA	8	Unmodified	_THVKARTA_					0	0	0		ENST00000487869.1_1_21:40752343-40763801:+|nuORF;nc|ENSG00000182093|O00258-2|GET1;ENSG00000182093|ENST00000649170|GET1	ENST00000487869.1_1_21:40752343-40763801:+|nuORF	ENST00000487869.1_1_21:40752343-40763801:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.2586242556572	2	442.259051	882.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.705	1	85.957	85.457	86.457	0.25227								0	0	0	1.0178	1	35837	35837		0.69038	0	1				33800	4595	16660	16733	39418	39418					0.057597401944121884
THVMMCMNC	9	Unmodified	_THVMMCMNC_					0	0	0		nc|ENSG00000154783|Q6ZNL6-2|FGD5;ENSG00000154783|ENST00000285046|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	nc|ENSG00000154783|Q6ZNL6-2|FGD5	MSMS	GG20161007_CRH_Patient100_A02_02	2	535.1912109255791	2	535.191436	1068.36832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.686	1	58.009	57.509	58.509	0.32298								0	0	0	0.42693	1	24186	24186		2.0598	1.2661	1				33801	3397	16661	16734	39419	39419					-0.1631302664134182
THVPPVGRG	9	Unmodified	_THVPPVGRG_					0	0	0			REV__ENST00000254066.9_1_17:38512563-38513013:+|nuORF	REV__ENST00000254066.9_1_17:38512563-38513013:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1973449587822	3	307.175126	918.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.6	1	55.57	55.07	56.07	1.9697								0	0	0	0.42693	1	22457	22457		0.96228	0.50394	1		+		33802	12153	16662	16735	39420	39420					0.04103740194432248
TIAEGLTLAQV	11	Unmodified	_TIAEGLTLAQV_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3200561404228	2	558.318971	1114.62339	1.5916	0.00088863	0.43037	0.00024028	2.022	0.0011289	558.3191065144119	62.76	0.31036	62.76	62.584	62.895	0					16	9	2	0	0	0	0.17773	1	26148	26148		41.84	22.583	1	615450			33803	2929	16663	16736	39421	39421					0.0706626395767671
TIAEGLTLAQV	11	Unmodified	_TIAEGLTLAQV_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.3201782107353	2	558.318971	1114.62339	1.8223	0.0010174	0.026092	1.4567E-05	1.8484	0.001032	558.3189774844536	62.32	0.27678	62.65	62.511	62.788	0.32974					14	8	2	0	0	0	0.54522	1	26104	26104		22.736	9.2284	1	939830			33804	2929	16663	16736	39422	39422					0.0706626395767671
TIAEGLTLAQV	11	Unmodified	_TIAEGLTLAQV_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3204833865166	2	558.318971	1114.62339	3.1333	0.0017494	-0.24245	-0.00013537	2.8908	0.001614	558.3186059984233	60.716	0.46057	62.681	62.482	62.942	1.9653					29	14	3	0	0	0	0.031246	1	25497	25497		78.728	36.888	1	4048400			33805	2929	16663	16736	39423	39423					0.0706626395767671
TIAEGLTLAQV	11	Unmodified	_TIAEGLTLAQV_					0	0	0		nc|ENSG00000140632|Q49A26-5|GLYR1;nc|ENSG00000140632|Q49A26-4|GLYR1;nc|ENSG00000140632|Q49A26-2|GLYR1;nc|ENSG00000140632|Q49A26-3|GLYR1;ENSG00000140632|ENST00000321919|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	nc|ENSG00000140632|Q49A26-5|GLYR1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	558.318971	1114.62339	3.106	0.0017341	0.80088	0.00044715	3.9069	0.0021813	558.3189461743743	61.197	0.61195	62.617	62.441	63.053	1.4196	-0.060119	0.00058228	NaN	78.728	33	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5002300			33806	2929	16663	16736							0.0706626395767671
TIAEIKNLF	9	Unmodified	_TIAEIKNLF_					0	0	0		ENST00000596953.5_1_19:14640508-14675852:+|nuORF;ENSG00000099797|ENST00000215567|TECR;ENST00000593637.5_1_19:14640508-14674910:+|nuORF;ENST00000594807.5_1_19:14640508-14674579:+|nuORF;ENST00000601652.5_1_19:14640444-14674077:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.8068725466728	2	524.8055	1047.59645	0.46572	0.00024441	0.91227	0.00047877	1.378	0.00072318	524.8061148966902	57.479	0.23362	59.448	59.281	59.515	1.9684					25	15	2	0	0	0	0.0079842	2	24071	24071;24109		122.18	60.822	1	10525000			33807	1215	16664	16737	39424;39425	39424					0.07455200137110296
TIAEVGKWLQA	11	Unmodified	_TIAEVGKWLQA_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	608.8035766482353	2	608.340238	1214.66592	1.5963	0.00097108	0.73162	0.00044507	2.3279	0.0014161	608.3404564985544	54.657	0.31231	56.062	55.899	56.211	1.4048					15	9	2	0	0	0	0.028277	1	22861	22861		65.474	32.029	1	3109700			33808	3639	16665	16738	39426	39426					0.06717659085916239
TIAEVGKWLQA	11	Unmodified	_TIAEVGKWLQA_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3423950076103	2	608.340238	1214.66592	1.8495	0.0011251	2.9882	0.0018178	4.8376	0.0029429	608.3406945422887	54.209	0.34879	56.177	55.938	56.287	1.9684					17	10	2	0	0	0	0.034474	1	22726	22726		75.571	35.331	1	2257600			33809	3639	16665	16738	39427	39427					0.06717659085916239
TIAEVGKWLQA	11	Unmodified	_TIAEVGKWLQA_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	608.340238	1214.66592	2.2013	0.0013392	-0.44991	-0.0002737	1.7514	0.0010655	608.3400625362648	56.302	0.2579	56.302	56.2	56.458	0	0.11753	-0.00075689	NaN	63.227	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1602900			33810	3639	16665	16738							0.06717659085916239
TIAEVGKWLQA	11	Unmodified	_TIAEVGKWLQA_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	608.340238	1214.66592	2.0266	0.0012328	-0.37907	-0.00023061	1.6475	0.0010022	608.3399518136929	55.875	0.26155	56.196	56.019	56.28	0.32088	0.011639	-0.0006707	NaN	63.227	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	847240			33811	3639	16665	16738							0.06717659085916239
TIALDVFPDM	10	Unmodified	_TIALDVFPDM_					0	0	0			REV__nc|ENSG00000153253|Q9NY46-4|SCN3A;REV__nc|ENSG00000169432|Q15858-4|SCN9A;REV__nc|ENSG00000144285|P35498-3|SCN1A;REV__ENST00000480032.4_1_2:166152333-166226884:+|nuORF	REV__nc|ENSG00000153253|Q9NY46-4|SCN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7861205935478	2	561.281	1120.54745	2.8972	0.0016262	-0.21637	-0.00012144	2.6808	0.0015047	561.7829712427887	70.158	0.59624	71.512	71.116	71.712	1.3536					58	18	5	0	0	0	0.77604	1	29486	29486		14.838	1.3304	1	8697300	+		33812	10451;10240;10949;9984	16666	16739	39428	39428					-0.008004562141422866
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2739745974541	2	498.274032	994.533512	1.9063	0.00094985	-4.0599	-0.002023	-2.1537	-0.0010731	498.27191691532323	67.762	0.60984	69.139	68.724	69.334	1.3778					33	19	2	0	0	0	0.070055	2	28461	28413;28461		60.074	2.6026	1	4325900	+		33813	8200	16667	16740	39429;39430	39430					0.036026343490902946
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2729064822197	2	498.274032	994.533512	1.078	0.00053716	-2.6891	-0.0013399	-1.6111	-0.00080276	498.2724820373765	67.273	0.3633	69.156	68.948	69.312	1.8824					28	11	3	0	0	0	0.20244	2	28189	28189;28238		32.786	2.1491	1	3122200	+		33814	8200	16667	16740	39431;39432	39431					0.036026343490902946
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	498.274032	994.533512	1.3784	0.00068683	-2.4825	-0.0012369	-1.1041	-0.00055012	498.2726150053052	69.354	0.31291	69.354	69.17	69.483	0	0.14885	0.00035624	NaN	60.074	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	741800	+		33815	8200	16667	16740							0.036026343490902946
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	498.274032	994.533512	2.0844	0.0010386	-2.7344	-0.0013625	-0.65	-0.00032388	498.2726219441652	68.85	0.31373	69.172	69.031	69.344	0.32224	-0.033409	0.00010518	NaN	60.074	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	992590	+		33816	8200	16667	16740							0.036026343490902946
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	498.274032	994.533512	1.9063	0.00094985	-4.0599	-0.002023	-2.1537	-0.0010731	498.27191691532323	67.762	0.60984	69.139	68.724	69.334	1.3778	-0.065799	-0.0012158	NaN	60.074	33	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4325900	+		33817	8200	16667	16740							0.036026343490902946
TIALTYSVQ	9	Unmodified	_TIALTYSVQ_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	498.274032	994.533512	1.078	0.00053716	-2.6891	-0.0013399	-1.6111	-0.00080276	498.2724820373765	67.273	0.3633	69.156	68.948	69.312	1.8824	-0.049644	0.0001503	NaN	60.074	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3122200	+		33818	8200	16667	16740							0.036026343490902946
TIAPALVSK	9	Unmodified	_TIAPALVSK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2822753787041	2	450.28166	898.548768	1.6201	0.00072952	-1.1255	-0.00050678	0.49467	0.00022274	450.28155029855316	24.455	0.21569	25.696	25.578	25.794	1.241					10	6	2	0	0	0	0.45911	1	10246	10246		17.443	5.9479	1	859860			33819	919	16668	16741	39433	39433					0.09543545936958253
TIAPALVSK	9	Unmodified	_TIAPALVSK_					0	0	0		ENST00000464920.1_1_1:8921421-8930582:-|nuORF;ENSG00000074800|ENST00000234590|ENO1	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	ENST00000464920.1_1_1:8921421-8930582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2826415896416	2	450.28166	898.548768	0.75855	0.00034156	0.43883	0.0001976	1.1974	0.00053916	450.2816551445335	24.065	0.24464	25.749	25.631	25.875	1.6845					13	7	2	0	0	0	0.28863	1	10053	10053		26.021	6.6588	1	571720			33820	919	16668	16741	39434	39434					0.09543545936958253
TIAQLVHAV	9	Unmodified	_TIAQLVHAV_					0	0	0		nc|ENSG00000160208|Q14684-2|RRP1B;ENSG00000160208|ENST00000340648|RRP1B;RRP1B|p.K182Efs*48|1|0.05|ENSG00000160208|chr21:43675151-43675152|-/G|frameshift_variant	nc|ENSG00000160208|Q14684-2|RRP1B;RRP1B|p.K182Efs*48|1|0.05|ENSG00000160208|chr21:43675151-43675152|-/G|frameshift_variant	nc|ENSG00000160208|Q14684-2|RRP1B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1996337771416	2	476.284734	950.554916	2.5333	0.0012066	-3.3683	-0.0016043	-0.83499	-0.00039769	476.2823319955818	46.533	0.30923	46.863	46.682	46.991	0.33034					19	10	2	0	0	0	0.11645	1	19512	19512		8.5933	3.8373	1	1060800			33821	3546;15947	16669	16742	39435	39435					0.07766064168470166
TICCRKMR	8	Unmodified	_TICCRKMR_					0	0	0		ENST00000371873.9_1_1:47842934-47843084:+|nuORF	ENST00000371873.9_1_1:47842934-47843084:+|nuORF	ENST00000371873.9_1_1:47842934-47843084:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.0452148318291	3	337.506725	1009.49835	2.1441	0.00072366	0.70653	0.00023846	2.8507	0.00096212	337.5068853147485	92.478	0.52412	92.646	92.377	92.901	0.16835					37	16	3	0	0	0	2.3239	1	38795	38795		0.45834	0	1	2443000			33822	6132	16670	16743	39436	39436					-0.006023462557095627
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1008.491259753704	1	1008.48842	1007.48114	1.726	0.0017407	0.68028	0.00068605	2.4063	0.0024268	1008.4892482267387	66.499	0.4173	66.499	66.285	66.703	0					27	12	3	0	0	0	0.042029	1	27704	27704		74.423	38.379	1	1639600			33823	5139	16671	16744	39437	39437					-0.02229948784508906
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1008.489916980267	1	1008.48842	1007.48114	2.2017	0.0022204	0.5244	0.00052885	2.7261	0.0027493	1008.489085662276	66.141	0.3502	66.466	66.272	66.622	0.32449					25	10	3	0	0	0	0.018723	3	27685	27638;27685;27730		100.37	36.135	1	2350000			33824	5139	16671	16744	39438;39439;39440	39439					-0.02229948784508906
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1008.490283191204	1	1008.48842	1007.48114	3.0358	0.0030616	-1.7012	-0.0017156	1.3346	0.001346	1008.4867029600252	65.061	0.59499	66.46	66.162	66.757	1.3989					58	18	5	0	0	0	0.0075027	4	27248	27211;27248;27287;27330		112.59	48.357	1	31342000			33825	5139	16671	16744	39441;39442;39443;39444	39442					-0.02229948784508906
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7490722537041	2	504.747847	1007.48114	3.2794	0.0016553	-1.0338	-0.00052181	2.2456	0.0011335	504.74724525119	65.041	0.46995	66.44	66.193	66.663	1.3989					31	13	3	0	0	0	0.066815	2	27276	27228;27276		61.357	13.012	1	3722200			33826	5139	16671	16744	39445;39446	39446					-0.02229948784508906
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.491259753704	1	1008.48842	1007.48114	2.1945	0.0022131	-1.4547	-0.0014671	0.73978	0.00074606	1008.4870429891154	64.575	0.57002	66.503	66.233	66.803	1.928					57	17	5	0	0	0	0.0075027	4	27031	27031;27077;27116;27159		112.59	48.357	1	26012000			33827	5139	16671	16744	39447;39448;39449;39450	39447					-0.02229948784508906
TIDDGIFEV	9	Unmodified	_TIDDGIFEV_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;nc|ENSG00000204389|P0DMV8-2|HSPA1A	ENSG00000204390|ENST00000375654|HSPA1L	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7480956912041	2	504.747847	1007.48114	1.9235	0.0009709	-0.05905	-2.9805E-05	1.8645	0.0009411	504.747666749063	64.671	0.41492	66.599	66.294	66.709	1.928					30	12	3	0	0	0	0.10993	1	27132	27132		46.021	3.9264	1	5354700			33828	5139	16671	16744	39451	39451					-0.02229948784508906
TIDSLIEL	8	Unmodified	_TIDSLIEL_					0	0	0		ENSG00000128564|ENST00000249330|VGF	ENSG00000128564|ENST00000249330|VGF	ENSG00000128564|ENST00000249330|VGF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2565490603447	2	452.255308	902.496064	2.3205	0.0010494	-0.26755	-0.000121	2.0529	0.00092844	452.2550930528945	67.85	0.49045	69.72	69.458	69.949	1.87					34	15	3	0	0	0	0.38673	1	28514	28514		56.541	0	1	4359600			33829	2371	16672	16745	39452	39452					0.040915430834729705
TIDTGLALV	9	Unmodified	_TIDTGLALV_					0	0	0			REV__tr|A0A553SQ13|A0A553SQ13_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15205PE=4SV=1	REV__tr|A0A553SQ13|A0A553SQ13_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5220825076103	1	902.519325	901.512048	2.9354	0.0026493	-0.22117	-0.00019961	2.7142	0.0024497	902.5191576294263	62.23	0.60378	64.187	63.815	64.419	1.9571					45	19	3	0	0	0	0.069258	1	26074	26074		60.39	2.9182	1	4031800	+		33830	15117	16673	16746	39453	39453					0.0573524932036662
TIDTSYLSP	9	Unmodified	_TIDTSYLSP_					0	0	0		ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	996.4922363162041	1	996.488418	995.481142	2.6003	0.0025912	1.8772	0.0018706	4.4775	0.0044618	996.4905172614964	61.396	0.34871	63.353	63.148	63.497	1.9571					14	10	2	0	0	0	0.49082	1	25774	25774		15.847	4.2069	1	714380			33831	4775	16674	16747	39454	39454					-0.016779487845269614
TIDTSYLSP	9	Unmodified	_TIDTSYLSP_					0	0	0		ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	ENSG00000185972|ENST00000335119|CCIN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	996.488418	995.481142	4.0213	0.0040072	0.74236	0.00073975	4.7637	0.0047469	996.4895797844546	61.735	0.37413	63.153	62.896	63.27	1.4177	-0.10014	-0.00037147	NaN	15.847	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	708670			33832	4775	16674	16747							-0.016779487845269614
TIEAKIMKVS	10	Unmodified	_TIEAKIMKVS_					0	0	0		tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	tr|A0A553SNX3|A0A553SNX3_NIACIChemotaxisproteinCheAOS=NialliacirculansOX=1397GN=CEQ21_25390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3271362185478	2	560.325742	1118.63693	1.8018	0.0010096	0.43035	0.00024113	2.2322	0.0012507	560.3266331474794	39.915	0.61533	41.777	41.309	41.925	1.8624					25	19	2	0	0	0	0.89803	1	16581	16581		1.6526	0	1	1446400			33833	16439	16675	16748	39455	39455					0.08235798465238986
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1022.50450438261	1	1022.50407	1021.49679	1.7332	0.0017722	-0.29682	-0.0003035	1.4363	0.0014687	1022.5029046697598	66.686	0.2867	66.686	66.48	66.767	0					15	8	2	0	0	0	0.13873	1	27755	27755		39.957	0	1	569580			33834	1687	16676	16749	39456	39456					-0.013096622674765968
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1022.506640613079	1	1022.50407	1021.49679	2.2983	0.00235	-1.0212	-0.0010442	1.2771	0.0013058	1022.5033691917489	66.218	0.28609	66.543	66.463	66.749	0.32449					14	8	2	0	0	0	0.083604	2	27719	27719;27784		54.774	12.934	1	700940			33835	1687	16676	16749	39457;39458	39457					-0.013096622674765968
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1022.50889891386	1	1022.50407	1021.49679	2.41	0.0024643	-0.51646	-0.00052809	1.8936	0.0019362	1022.5032488021966	65.157	0.40866	66.556	66.348	66.757	1.3989					31	12	3	0	0	0	0.049839	1	27292	27292		68.081	3.8444	1	4763400			33836	1687	16676	16749	39459	39459					-0.013096622674765968
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1022.504809558392	1	1022.50407	1021.49679	2.0537	0.0020999	-1.3547	-0.0013851	0.699	0.00071473	1022.5027050012646	64.73	0.41184	66.658	66.422	66.834	1.928					31	12	3	0	0	0	0.0075027	3	27151	27100;27151;27204		112.59	22.788	1	3369400			33837	1687	16676	16749	39460;39461;39462	39461					-0.013096622674765968
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7562133669853	2	511.755672	1021.49679	2.3123	0.0011833	0.34317	0.00017562	2.6555	0.001359	511.754959056539	64.734	0.44501	66.662	66.389	66.834	1.928					20	13	3	0	0	0	0.44535	1	27139	27139		18.135	4.6271	1	1912700			33838	1687	16676	16749	39463	39463					-0.013096622674765968
TIEDGIFEV	9	Unmodified	_TIEDGIFEV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000532091.1_1_11:122929724-122930952:-|nuORF;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	511.755672	1021.49679	3.3526	0.0017157	-0.98137	-0.00050222	2.3712	0.0012135	511.75489001058367	65.158	0.31374	66.557	66.38	66.694	1.3989	-0.052462	-0.00035061	NaN	18.135	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1009500			33839	1687	16676	16749							-0.013096622674765968
TIEFSELFL	9	Unmodified	_TIEFSELFL_					0	0	0			REV__ENSG00000115946|ENST00000263657|PNO1	REV__ENSG00000115946|ENST00000263657|PNO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2184326052666	2	549.789515	1097.56448	2.6931	0.0014807	3.6351	0.0019985	6.3282	0.0034792	549.7926798235791	84.847	0.20311	86.443	86.311	86.514	1.5962					9	6	2	0	0	0	0.11645	1	35582	35582		8.5933	5.7041	1	669720	+		33840	9463	16677	16750	39464	39464					0.01959787663327006
TIFAGTLITA	10	Unmodified	_TIFAGTLITA_					0	0	0		ENST00000457540.1_1_1:565028-565094:+|nuORF;ENSG00000198763|ENST00000361453|MT-ND2	ENST00000457540.1_1_1:565028-565094:+|nuORF	ENST00000457540.1_1_1:565028-565094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1007.579455554485	1	1007.57717	1006.5699	1.5843	0.0015963	-0.45705	-0.00046051	1.1273	0.0011358	1007.5769597222662	69.456	0.25258	69.456	69.326	69.579	0					11	7	2	0	0	0	0.24174	1	28924	28924		43.858	9.4566	1	522180			33841	5079	16678	16751	39465	39465					0.0668751124579785
TIFAGTLITA	10	Unmodified	_TIFAGTLITA_					0	0	0		ENST00000457540.1_1_1:565028-565094:+|nuORF;ENSG00000198763|ENST00000361453|MT-ND2	ENST00000457540.1_1_1:565028-565094:+|nuORF	ENST00000457540.1_1_1:565028-565094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1007.580737292767	1	1007.57717	1006.5699	1.7117	0.0017247	0.85313	0.00085959	2.5649	0.0025843	1007.5782897337597	68.975	0.21906	69.297	69.188	69.407	0.32224					12	6	2	0	0	0	0.19223	1	28882	28882		49.933	15.531	1	698020			33842	5079	16678	16751	39466	39466					0.0668751124579785
TIFAGTLITA	10	Unmodified	_TIFAGTLITA_					0	0	0		ENST00000457540.1_1_1:565028-565094:+|nuORF;ENSG00000198763|ENST00000361453|MT-ND2	ENST00000457540.1_1_1:565028-565094:+|nuORF	ENST00000457540.1_1_1:565028-565094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1007.580737292767	1	1007.57717	1006.5699	2.0458	0.0020613	1.5713	0.0015832	3.6171	0.0036445	1007.5788840557206	67.83	0.3575	69.208	69.007	69.364	1.3778					19	11	2	0	0	0	0.092962	1	28441	28441		65.235	17.486	1	2016000			33843	5079	16678	16751	39467	39467					0.0668751124579785
TIFAGTLITA	10	Unmodified	_TIFAGTLITA_					0	0	0		ENST00000457540.1_1_1:565028-565094:+|nuORF;ENSG00000198763|ENST00000361453|MT-ND2	ENST00000457540.1_1_1:565028-565094:+|nuORF	ENST00000457540.1_1_1:565028-565094:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1007.578967273235	1	1007.57717	1006.5699	1.3921	0.0014026	1.2049	0.001214	2.5969	0.0026166	1007.5780029136212	67.264	0.30156	69.153	69.048	69.35	1.8889					17	9	2	0	0	0	0.059378	1	28218	28218		74.929	31.071	1	2519300			33844	5079	16678	16751	39468	39468					0.0668751124579785
TIFCYYYAYFF	11	Unmodified	_TIFCYYYAYFF_					0	0	0			REV__KCNK15|p.H188Y|1|0.12|ENSG00000124249|chr20:44750407-44750407|C/T|missense_variant	REV__KCNK15|p.H188Y|1|0.12|ENSG00000124249|chr20:44750407-44750407|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2264587283134	3	500.889664	1499.64716	0.51942	0.00026017	2.014	0.0010088	2.5334	0.001269	500.8908971712696	14.991	0.18627	14.991	14.874	15.061	0					15	5	4	0	0	0	1.0362	1	6214	6214		1.3296	0	1	1182200	+		33845	14240	16679	16752	39469	39469					-0.08267638600182181
TIFFPCWMV	9	Unmodified	_TIFFPCWMV_					0	0	0			REV__nc|ENSG00000102468|P28223-2|HTR2A	REV__nc|ENSG00000102468|P28223-2|HTR2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2720825076103	2	572.271924	1142.52929	2.1761	0.0012453	-2.152	-0.0012315	0.024113	1.3799E-05	572.2702729464851	71.273	0.7294	72.614	72.392	73.122	1.3415					78	23	4	0	0	0	0.3154	2	29915	29915;29969		24.674	1.9376	1	16598000	+		33846	9073	16680	16753	39470;39471	39470					-0.0362686966984711
TIFKAWAV	8	Unmodified	_TIFKAWAV_					0	0	0		ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2746459841728	2	468.271096	934.527639	2.3177	0.0010853	3.5468	0.0016608	5.8645	0.0027462	468.2731238136387	54.505	0.17151	54.505	54.424	54.595	0					8	5	2	0	0	0	0.87106	1	22731	22731		14.582	0	1	537200			33847	2016	16681	16754	39472	39472					0.057755806280852084
TIFKAWAV	8	Unmodified	_TIFKAWAV_					0	0	0		ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	ENSG00000117595|ENST00000367021|IRF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.2717468142509	2	468.271096	934.527639	2.5801	0.0012082	-0.096323	-4.5105E-05	2.4838	0.0011631	468.2711117623338	53.831	0.21724	54.152	54.006	54.223	0.32088					9	6	2	0	0	0	0.87106	1	22557	22557		14.582	0	1	558530			33848	2016	16681	16754	39473	39473					0.057755806280852084
TIFKEKQI	8	Unmodified	_TIFKEKQI_					0	0	0		tr|A0A7D6VTL7|A0A7D6VTL7_9CLOTLrp/AsnCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17440PE=4SV=1;nc|ENSG00000105695|P20916-2|MAG;nc|ENSG00000105695|P20916-3|MAG;ENSG00000105695|ENST00000392213|MAG	tr|A0A7D6VTL7|A0A7D6VTL7_9CLOTLrp/AsnCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17440PE=4SV=1	tr|A0A7D6VTL7|A0A7D6VTL7_9CLOTLrp/AsnCfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17440PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.8014099001884	2	503.800217	1005.58588	1.7609	0.00088716	0.69639	0.00035084	2.4573	0.001238	503.8004930599203	43.05	0.39149	44.971	44.751	45.142	1.9211					32	12	3	0	0	0	0.58448	1	18077	18077		50.855	10.905	1	4744300			33849	1536	16682	16755	39474	39474					0.08331217482702868
TIFKLTSER	9	Unmodified	_TIFKLTSER_					0	0	0			REV__ENST00000375078.3_1_1:20809917-20810088:-|nuORF	REV__ENST00000375078.3_1_1:20809917-20810088:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	547.3573486208916	2	547.813856	1093.61316	4.9278	0.0026995	3.0325	0.0016613	7.9603	0.0043608	547.8157663420883	89.584	0.31023	90.604	90.429	90.739	1.0199					16	9	2	0	0	0	0.076673	1	37741	37741		29.082	0	1	1146000	+		33850	12710	16683	16756	39475	39475					0.07009701023071102
TIGIGITKK	9	Unmodified	_TIGIGITKK_					0	0	0		tr|A0A7D6VVY0|A0A7D6VVY0_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06935PE=4SV=1	tr|A0A7D6VVY0|A0A7D6VVY0_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06935PE=4SV=1	tr|A0A7D6VVY0|A0A7D6VVY0_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_06935PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.8041564822197	2	465.80276	929.590967	2.9041	0.0013527	0.14186	6.608E-05	3.046	0.0014188	465.8029073739286	87.716	0.32652	87.716	87.551	87.878	0					19	10	2	0	0	0	0.19075	1	36668	36668		34.102	3.8776	1	4646900			33851	16968	16684	16757	39476	39476					0.12335521345323741
TIGQIELEL	9	Unmodified	_TIGQIELEL_					0	0	0		ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1015.571765124798	1	1015.567	1014.55973	1.8252	0.0018536	2.2638	0.002299	4.089	0.0041526	1015.5698474519428	74.189	0.28743	74.189	74.079	74.367	0					14	8	2	0	0	0	0.04145	1	30900	30900		74.929	12.356	1	691530			33852	4124	16685	16758	39477	39477					0.05302903520566815
TIGQIELEL	9	Unmodified	_TIGQIELEL_					0	0	0		ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1015.571582019329	1	1015.567	1014.55973	2.6982	0.0027402	2.2435	0.0022784	4.9417	0.0050187	1015.5692896794901	73.744	0.22396	74.068	73.977	74.201	0.32494					9	6	2	0	0	0	0.031377	1	30857	30857		85.272	3.3818	1	663610			33853	4124	16685	16758	39478	39478					0.05302903520566815
TIGQIELEL	9	Unmodified	_TIGQIELEL_					0	0	0		ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	ENSG00000169991|ENST00000455833|IFFO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1015.573168933392	1	1015.567	1014.55973	2.6067	0.0026473	2.349	0.0023856	4.9557	0.0050329	1015.5691083238586	72.672	0.28114	74.001	73.883	74.164	1.3297					16	8	3	0	0	0	0.0017491	1	30493	30493		131.27	4.7017	1	2222100			33854	4124	16685	16758	39479	39479					0.05302903520566815
TIHILILLLL	10	Unmodified	_TIHILILLLL_					0	0	0		ENSG00000224420|ENST00000420022|ADM5	ENSG00000224420|ENST00000420022|ADM5	ENSG00000224420|ENST00000420022|ADM5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	581.5327636599541	2	581.40211	1160.78967	2.6396	0.0015347	2.9434	0.0017113	5.583	0.003246	581.4043394334769	107.24	0.084412	107.29	107.25	107.33	0.052444					7	3	3	0	0	0	0.12561	1	45807	45807		0	0	1	2700200			33855	5284	16686	16759	39480	39480					0.21570361924204917
TIHILILLLL	10	Unmodified	_TIHILILLLL_					0	0	0		ENSG00000224420|ENST00000420022|ADM5	ENSG00000224420|ENST00000420022|ADM5	ENSG00000224420|ENST00000420022|ADM5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	581.40211	1160.78967	1.2283	0.00071411	3.3821	0.0019664	4.6104	0.0026805	581.404092911404	107.27	0.20226	107.27	107.21	107.41	0	-0.0091539	0.00018599	NaN	0	14	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5283200			33856	5284	16686	16759							0.21570361924204917
TIHQRIRTE	9	Unmodified	_TIHQRIRTE_					0	0	0		nc|ENSG00000168122|Q9NSJ1|ZNF355P	nc|ENSG00000168122|Q9NSJ1|ZNF355P	nc|ENSG00000168122|Q9NSJ1|ZNF355P	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1663085818291	3	385.219395	1152.63635	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.01	1	103.18	102.68	103.68	0.16445								0	0	0	0.42693	1	43398	43398		1.0715	0	1				33857	7920	16687	16760	39481	39481					0.06614139860425894
TIHRRKRRRR	10	Unmodified	_TIHRRKRRRR_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4830505251884	4	359.482989	1433.90285	0.726	0.00026099	-1.9602	-0.00070465	-1.2342	-0.00044367	359.4821179646642	27.451	1.1834	27.722	26.995	28.179	0.27119					153	38	5	0	0	0	0.89803	1	11430	11430		0.12286	0.12286	1	28988000			33858	7825	16688	16761	39482	39482					0.20325287933292202
TIHRRKRRRR	10	Unmodified	_TIHRRKRRRR_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	359.4829284548759	4	359.482989	1433.90285	0.86276	0.00031015	-0.40009	-0.00014382	0.46267	0.00016632	359.4827941872491	29.971	2.2723	30.257	29.507	31.78	0.2859					236	75	5	0	0	0	0.89803	10	12373	12373;12424;12475;12526;12577;12622;12673;12726;12779;12832		0.12286	0.12286	1	38997000			33859	7825	16688	16761	39483;39484;39485;39486;39487;39488;39489;39490;39491;39492	39483					0.20325287933292202
TIHRRKRRRR	10	Unmodified	_TIHRRKRRRR_					0	0	0		nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	nc|ENSG00000062650|Q7Z5K2-2|WAPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.7335388064384	4	359.482989	1433.90285	0.2639	9.4868E-05	-0.68842	-0.00024748	-0.42452	-0.00015261	359.4826316800377	25.983	1.3716	27.699	26.877	28.249	1.7167					138	44	5	0	0	0	0.89803	2	10796	10796;10836		0.12286	0.039514	1	33189000			33860	7825	16688	16761	39493;39494	39493					0.20325287933292202
TIIDKSKSV	9	Unmodified	_TIIDKSKSV_					0	0	0		ENSG00000112972|ENST00000325110|HMGCS1;ENST00000507004.1_1_5:43298575-43313480:-|nuORF;ENST00000507293.1_1_5:43298575-43313499:-|nuORF	ENSG00000112972|ENST00000325110|HMGCS1	ENSG00000112972|ENST00000325110|HMGCS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7968322634697	2	495.795132	989.575711	1.8857	0.00093491	0.74602	0.00036987	2.6317	0.0013048	495.7957464288696	67.729	0.43433	69.599	69.362	69.796	1.87					33	13	3	0	0	0	0.24063	1	28446	28446		28.487	0	1	3734700			33861	1801	16689	16762	39495	39495					0.08050609757481197
TIISEFTKG	9	Unmodified	_TIISEFTKG_					0	0	0		tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2742187380791	2	498.274032	994.533512	2.172	0.0010822	-2.0583	-0.0010256	0.1137	5.6655E-05	498.27296189751326	68.341	0.40005	69.719	69.459	69.859	1.3778					25	12	3	0	0	0	0.12216	1	28657	28657		41.956	5.9114	1	1901300			33862	16395	16690	16763	39496	39496					0.03602634349113032
TIISEFTKG	9	Unmodified	_TIISEFTKG_					0	0	0		tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	498.274032	994.533512	1.3548	0.00067508	-1.8211	-0.00090741	-0.46627	-0.00023233	498.27275122047143	69.857	0.28684	69.857	69.706	69.993	0	0.14056	0.0006839	NaN	41.956	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557730			33863	16395	16690	16763							0.03602634349113032
TIISEFTKG	9	Unmodified	_TIISEFTKG_					0	0	0		tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	498.274032	994.533512	1.9944	0.00099375	-2.527	-0.0012592	-0.53266	-0.00026541	498.27273079715894	69.364	0.31586	69.686	69.562	69.878	0.32223	-0.030504	-1.9586E-05	NaN	41.956	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	619880			33864	16395	16690	16763							0.03602634349113032
TIISEFTKG	9	Unmodified	_TIISEFTKG_					0	0	0		tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	498.274032	994.533512	2.172	0.0010822	-2.0583	-0.0010256	0.1137	5.6655E-05	498.27296189751326	68.341	0.40005	69.719	69.459	69.859	1.3778	0.0026709	0.00044754	NaN	41.956	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1901300			33865	16395	16690	16763							0.03602634349113032
TIISEFTKG	9	Unmodified	_TIISEFTKG_					0	0	0		tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	tr|A0A553SMU5|A0A553SMU5_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_23105PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	498.274032	994.533512	1.7765	0.00088517	-3.21	-0.0015995	-1.4335	-0.00071428	498.27244292544214	67.734	0.43311	69.604	69.394	69.827	1.87	-0.11272	-0.00070018	NaN	41.956	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1740800			33866	16395	16690	16763							0.03602634349113032
TIIVFLEMY	9	Unmodified	_TIIVFLEMY_					0	0	0		ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.8043090701103	2	564.804111	1127.59367	1.3316	0.0007521	-1.6254	-0.00091806	-0.29383	-0.00016596	564.8038667688238	40.631	0.3045	40.631	40.49	40.794	0					18	9	3	0	0	0	0.39927	1	17014	17014		20.454	4.3045	1	1092800			33867	6869	16691	16764	39497	39497					0.03497608687985121
TIIVFLEMY	9	Unmodified	_TIIVFLEMY_					0	0	0		ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8030883669853	2	564.804111	1127.59367	0.97573	0.0005511	-2.9503	-0.0016663	-1.9745	-0.0011152	564.8023117672805	38.127	0.37352	39.948	39.788	40.162	1.8202					27	11	3	0	0	0	0.49082	1	15968	15968		15.847	3.3156	1	2468800			33868	6869	16691	16764	39498	39498					0.03497608687985121
TIIVFLEMY	9	Unmodified	_TIIVFLEMY_					0	0	0		ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	ENST00000486772.1_1_20:13797459-13797853:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	564.804111	1127.59367	1.5748	0.00088946	-1.3772	-0.00077783	0.19765	0.00011163	564.8032976344739	40.167	0.34596	40.48	40.288	40.634	0.31262	-0.075631	0.00012508	NaN	20.454	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508750			33869	6869	16691	16764							0.03497608687985121
TIIVIEHH	8	Unmodified	_TIIVIEHH_					0	0	0		tr|A0A553SSC0|A0A553SSC0_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_02715PE=3SV=1	tr|A0A553SSC0|A0A553SSC0_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_02715PE=3SV=1	tr|A0A553SSC0|A0A553SSC0_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_02715PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2796508669853	2	481.276909	960.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.03	1	104.03	103.53	104.53	0								0	0	0	1.0178	1	43823	43823		0.79363	0	1				33870	16601	16692	16765	39499	39499					0.057417776514284924
TIIVLLLV	8	Unmodified	_TIIVLLLV_					0	0	0		tr|A0A553SK58|A0A553SK58_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_17955PE=3SV=1	tr|A0A553SK58|A0A553SK58_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_17955PE=3SV=1	tr|A0A553SK58|A0A553SK58_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_17955PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.3170043826103	2	442.314972	882.615391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.853	1	90.077	89.577	90.577	0.22359								0	0	0	1.0178	1	37655	37655		0	0	1				33871	16270	16693	16766	39500	39500					0.16938781498868138
TIIVLLPLG	9	Unmodified	_TIIVLLPLG_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	313.6151916384697	3	313.547678	937.621205	-2.4232	-0.00075979	4.28	0.001342	1.8568	0.0005822	313.5491430765575	96.241	0.14199	96.241	96.179	96.321	0					5	4	2	0	0	0	0.11954	1	40244	40244		0.26902	0	1	371090	+		33872	11905	16694	16767	39501	39501					0.14989880010534762
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2441894412041	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89588	3	8091	8004;8052;8091		1.9064	0	1	155460000	+		33873	11905	16695	16768	39502;39503;39504	39504					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2429687380791	3	351.242366	1050.70527	0.33569	0.00011791	2.3995	0.00084281	2.7352	0.00096072	351.24325833524324	21.886	1.4635	22.109	21.872	23.336	0.223					130	48	6	0	0	0	0.89588	1	9064	9064		1.9064	0	1	59592000	+		33874	11905	16695	16768	39505	39505					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2428466677666	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	3	7646	7646;7723;7812		0.77653	0	1	143590000	+		33875	11905	16695	16768	39506;39507;39508	39506					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2437316775322	3	351.242366	1050.70527	-0.31456	-0.00011049	2.7544	0.00096747	2.4399	0.00085699	351.24338489352726	20.872	1.9953	21.997	21.775	23.77	1.1254					139	65	5	0	0	0	0.89588	2	8693	8643;8693		1.9064	0	1	92439000	+		33876	11905	16695	16768	39509;39510	39510					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2434265017509	3	351.242366	1050.70527	-0.17861	-6.2736E-05	1.9615	0.00068895	1.7829	0.00062622	351.2434098450176	16.233	0.9273	17.272	17.013	17.94	1.0392					119	32	6	0	0	0	0.89803	2	6804	6804;6848		0.69767	0	1	381400000	+		33877	11905	16695	16768	39511;39512	39511					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2432433962822	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89588	2	7648	7559;7648		1.9064	0	1	364430000	+		33878	11905	16695	16768	39513;39514	39514					0.18194411107424457
TIIVLLPLGL	10	Unmodified	_TIIVLLPLGL_					0	0	0			REV__ENSG00000235750|ENST00000423313|KIAA0040	REV__ENSG00000235750|ENST00000423313|KIAA0040	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2428161501884	3	351.242366	1050.70527	-0.0090448	-3.1769E-06	2.3168	0.00081374	2.3077	0.00081057	351.2432799196589	20.291	1.6712	21.866	21.639	23.31	1.5748					150	55	6	0	0	0	0.89803	1	8516	8516		0.69767	0	1	95744000	+		33879	11905	16695	16768	39515	39515					0.18194411107424457
TIIWGINLL	9	Unmodified	_TIIWGINLL_					0	0	0			REV__tr|A0A553SPB8|A0A553SPB8_NIACIProtohemeIXfarnesyltransferaseOS=NialliacirculansOX=1397GN=ctaBPE=3SV=1	REV__tr|A0A553SPB8|A0A553SPB8_NIACIProtohemeIXfarnesyltransferaseOS=NialliacirculansOX=1397GN=ctaBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.8206054568291	2	521.81841	1041.62227	2.8643	0.0014947	-0.77856	-0.00040627	2.0858	0.0010884	521.8181128832165	60.875	0.24447	62.841	62.668	62.912	1.9653					13	7	2	0	0	0	0.32838	1	25525	25525		24.021	2.4836	1	879710	+		33880	15081	16696	16769	39516	39516					0.10312094379423797
TIKEAFVH	8	Unmodified	_TIKEAFVH_					0	0	0			REV__ENSG00000140743|ENST00000268383|CDR2	REV__ENSG00000140743|ENST00000268383|CDR2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2758972048759	2	472.763635	943.512717	3.4667	0.0016389	-1.2439	-0.00058806	2.2228	0.0010509	472.7622683894225	96.544	0.43283	96.649	96.573	97.006	0.105					25	13	4	0	0	0	0.88958	1	40489	40489		2.8892	0	1	12034000	+		33881	10131	16697	16770	39517	39517					0.03870088760083945
TIKLGTRY	8	Unmodified	_TIKLGTRY_					0	0	0			REV__ENST00000598875.1_1_19:44169462-44174272:-|nuORF	REV__ENST00000598875.1_1_19:44169462-44174272:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1997253298759	2	476.284734	950.554916	2.3894	0.0011381	-3.9551	-0.0018838	-1.5657	-0.00074572	476.2820445642691	47.042	0.31812	47.042	46.863	47.181	0					18	9	3	0	0	0	2.3239	1	19664	19664		12.532	0	1	1088200	+		33882	8536	16698	16771	39518	39518					0.07766064168458797
TIKLLEKV	8	Unmodified	_TIKLLEKV_					0	0	0			REV__ENSG00000103351|ENST00000576634|CLUAP1	REV__ENSG00000103351|ENST00000576634|CLUAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.3148376345634	2	472.312961	942.611368	2.7663	0.0013065	-0.66182	-0.00031258	2.1044	0.00099395	472.3126350802171	61.501	0.40001	61.831	61.641	62.041	0.32974					21	12	2	0	0	0	0.67986	1	25743	25743		32.305	0	1	1139000	+		33883	9105	16699	16772	39519	39519					0.13776692005137647
TIKNRCFE	8	Unmodified	_TIKNRCFE_					0	0	0		tr|A0A553SH70|A0A553SH70_NIACIDUF2521familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12300PE=4SV=1	tr|A0A553SH70|A0A553SH70_NIACIDUF2521familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12300PE=4SV=1	tr|A0A553SH70|A0A553SH70_NIACIDUF2521familyproteinOS=NialliacirculansOX=1397GN=CEQ21_12300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.5078613162041	3	337.507777	1009.5015	-1.3873	-0.00046823	1.0419	0.00035165	-0.3454	-0.00011657	337.50802505655776	92.788	0.54562	92.788	92.53	93.076	0					39	17	3	0	0	0	0.8577	1	38763	38763		16.149	0.90062	1	3478300			33884	16138	16700	16773	39520	39520					-0.0028705660570267355
TIKRYLASYRK	11	Unmodified	_TIKRYLASYRK_					0	0	0		tr|A0A7D7A391|A0A7D7A391_9CLOTTransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20770PE=4SV=1	tr|A0A7D7A391|A0A7D7A391_9CLOTTransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20770PE=4SV=1	tr|A0A7D7A391|A0A7D7A391_9CLOTTransposaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20770PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	699.9182006716728	2	699.914436	1397.81432	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.1	1	119.26	118.76	119.76	0.16237								0	0	0	0.63775	1	51399	51399		2.4985	0.84587	1				33885	17272	16701	16774	39521	39521					0.13132390059581667
TIKSSILRN	9	Unmodified	_TIKSSILRN_					0	0	0		ENST00000472821.5_1_3:149814257-149842756:+|nuORF	ENST00000472821.5_1_3:149814257-149842756:+|nuORF	ENST00000472821.5_1_3:149814257-149842756:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3162109255791	2	516.314023	1030.61349	2.9572	0.0015268	0.86407	0.00044613	3.8212	0.001973	516.3141782251407	82.671	0.55691	84.341	84.017	84.574	1.67					63	17	5	0	0	0	0.85068	1	34656	34656		0.45834	0	1	55490000			33886	6760	16702	16775	39522	39522					0.0994112074295117
TIKTLNNI	8	Unmodified	_TIKTLNNI_					0	0	0		tr|A0A553SF75|A0A553SF75_NIACID-3-phosphoglyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08345PE=3SV=1	tr|A0A553SF75|A0A553SF75_NIACID-3-phosphoglyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08345PE=3SV=1	tr|A0A553SF75|A0A553SF75_NIACID-3-phosphoglyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_08345PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1731140017509	2	458.776742	915.538931	3.5828	0.0016437	3.1016	0.0014229	6.6844	0.0030666	458.77842438216794	74.237	0.30142	75.555	75.438	75.739	1.318					15	9	2	0	0	0	2.3239	1	31217	31217		2.3027	0	1	764700			33887	16045	16703	16776	39523	39523					0.07778357931567825
TILEEVIML	9	Unmodified	_TILEEVIML_					0	0	0		ENST00000551727.5_1_12:104520004-104522249:-|nuORF	ENST00000551727.5_1_12:104520004-104522249:-|nuORF	ENST00000551727.5_1_12:104520004-104522249:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3019897341728	2	530.801568	1059.58858	0.95595	0.00050742	-1.1749	-0.00062365	-0.21897	-0.00011623	531.301196514685	53.112	0.42979	55.081	54.927	55.357	1.9697					33	20	2	0	0	0	0.66839	1	22277	22277		8.5933	0	1	6123200			33888	7270	16704	16777	39524	39524					0.06117304825352221
TILGDPQILLL	11	Unmodified	_TILGDPQILLL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2496215701103	3	399.248068	1194.72238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.22	1	110.38	109.88	110.88	0.16133								0	0	0	0.63775	1	47886	47886		0.094841	0	1				33889	3380	16705	16778	39525	39525					0.1328028692259977
TILGDPQILLL	11	Unmodified	_TILGDPQILLL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2493469119072	3	399.248068	1194.72238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.55	1	110.71	110.21	111.21	0.16133								0	0	0	0.63775	1	48006	48006		0.094841	0	1				33890	3380	16705	16778	39526	39526					0.1328028692259977
TILGDPQILLL	11	Unmodified	_TILGDPQILLL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2476989626884	3	399.248068	1194.72238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.21	1	111.38	110.88	111.88	0.16445								0	0	0	0.63775	1	48271	48271		0.094841	0	1				33891	3380	16705	16778	39527	39527					0.1328028692259977
TILGDPQILLL	11	Unmodified	_TILGDPQILLL_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;ENST00000589803.5_1_17:67102167-67114054:-|nuORF	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2498046755791	3	399.248068	1194.72238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.93	110.43	111.43	0.15228								0	0	0	0.63775	1	48027	48027		0.094841	0	1				33892	3380	16705	16778	39528	39528					0.1328028692259977
TILKKKPG	8	Unmodified	_TILKKKPG_					0	0	0		ENST00000257663.3_1_7:77423425-77423503:-|nuORF	ENST00000257663.3_1_7:77423425-77423503:-|nuORF	ENST00000257663.3_1_7:77423425-77423503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5940429568291	1	884.592764	883.585488	3.1209	0.0027608	-1.1378	-0.0010065	1.9831	0.0017542	884.5915851080885	106.14	0.19696	106.3	106.2	106.4	0.16174					36	10	5	0	0	0	0.89176	1	45292	45292		0.79363	0	1	568070000			33893	5605	16706	16779	39529	39529					0.13903842553520462
TILKPFMLS	9	Unmodified	_TILKPFMLS_					0	0	0		nc|ENSG00000171121|Q9NPA1-4|KCNMB3;ENSG00000171121|ENST00000392685|KCNMB3;nc|ENSG00000171121|Q9NPA1-2|KCNMB3;nc|ENSG00000171121|Q9NPA1|KCNMB3;KCNMB3|p.R90Sfs*2|1|0.07|ENSG00000171121|chr3:179244684-179244685|-/AA|frameshift_variant;nc|ENSG00000171121|Q9NPA1-5|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	nc|ENSG00000171121|Q9NPA1-4|KCNMB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7915527224541	2	525.306821	1048.59909	3.3121	0.0017399	3.3563	0.0017631	6.6684	0.003503	525.3099995793019	60.792	0.41185	62.211	61.933	62.345	1.4196					18	12	2	0	0	0	0.23535	1	25437	25437		29.082	2.8134	1	1884200			33894	4179	16707	16780	39530	39530					0.07673332270451283
TILLNTKRL	9	Unmodified	_TILLNTKRL_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;UNC45A-IQGAP1|2|fusion;UNC45A-IQGAP1|1|fusion;ENST00000561132.5_1_15:91029339-91034840:+|nuORF	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3524658083916	2	536.347866	1070.68118	1.894	0.0010158	2.9496	0.001582	4.8436	0.0025978	536.3491420954203	83.424	0.36615	85.062	84.855	85.221	1.6379					20	11	2	0	0	0	0.23535	1	34959	34959		29.082	2.8134	1	2402800			33895	2927	16708	16781	39531	39531					0.1486657067375745
TILMRPVVGG	10	Unmodified	_TILMRPVVGG_					0	0	0			REV__ENST00000556263.1_1_14:55605083-55607082:+|nuORF	REV__ENST00000556263.1_1_14:55605083-55607082:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2064697146416	3	348.207438	1041.60049	0.39261	0.00013671	-2.7052	-0.00094198	-2.3126	-0.00080528	348.20622737833367	30.824	0.90298	32.639	32.358	33.261	1.8151					69	30	3	0	0	0	0.87271	1	12898	12898		4.4062	1.0865	1	8107700	+		33896	9834	16709	16782	39532	39532					0.08134966359216378
TILPKVMQV	9	Unmodified	_TILPKVMQV_					0	0	0		ENST00000484386.1_1_15:44097294-44102132:-|nuORF;ENSG00000140259|ENST00000267812|MFAP1	ENST00000484386.1_1_15:44097294-44102132:-|nuORF	ENST00000484386.1_1_15:44097294-44102132:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8140136599541	2	514.81227	1027.60999	2.1101	0.0010863	0.43287	0.00022285	2.543	0.0013092	514.8124759471184	48.884	0.40044	50.861	50.637	51.038	1.9772					18	12	2	0	0	0	0.10294	1	20478	20478		48.346	20.717	1	839360			33897	2904	16710	16783	39533	39533					0.0972873464472741
TILPRQLW	8	Unmodified	_TILPRQLW_					0	0	0			REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8757202029228	3	342.874677	1025.6022	0.88883	0.00030476	2.1158	0.00072546	3.0046	0.0010302	342.8752769688571	33.988	0.5747	34.285	34.024	34.599	0.29701					65	18	5	0	0	0	0.88942	1	14303	14303		2.9952	0.26005	1	9107400	+		33898	13881	16711	16784	39534	39534					0.09042343439477918
TILPRQLW	8	Unmodified	_TILPRQLW_					0	0	0			REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8750182986259	3	342.874677	1025.6022	-0.70207	-0.00024072	2.1552	0.00073897	1.4532	0.00049825	342.87524809146396	32.825	0.43128	34.103	33.887	34.319	1.2782					50	15	4	0	0	0	0.88942	1	13787	13787		2.9952	0.26005	1	12945000	+		33899	13881	16711	16784	39535	39535					0.09042343439477918
TILPRQLW	8	Unmodified	_TILPRQLW_					0	0	0			REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	REV__ENST00000558282.5_1_15:85734698-85737265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8748657107353	3	342.874677	1025.6022	-0.89696	-0.00030754	1.9054	0.00065333	1.0085	0.00034578	342.8752400954134	34.925	0.46817	36.2	35.962	36.43	1.2746					64	44	2	0	0	0	0.88577	1	14755	14755		5.2969	0.76802	1	13272000	+		33900	13881	16711	16784	39536	39536					0.09042343439477918
TILPRSPSR	9	Unmodified	_TILPRSPSR_					0	0	0			REV__ENST00000535914.1_1_12:26278184-26278990:-|nuORF	REV__ENST00000535914.1_1_12:26278184-26278990:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8746826052666	3	342.873336	1025.59818	0.94013	0.00032235	3.3577	0.0011513	4.2978	0.0014736	342.87446472036237	35.034	0.35202	35.333	35.097	35.449	0.29942					38	29	2	0	0	0	0.67936	1	14674	14674		5.4027	1.2132	1	11243000	+		33901	13747	16712	16785	39537	39537					0.08640253945759468
TILVGKILS	9	Unmodified	_TILVGKILS_					0	0	0			REV__tr|A0A7D6ZIH1|A0A7D6ZIH1_9CLOTAnti-sigma-WfactorRsiWOS=ClostridiumintestinaleOX=36845GN=HZF06_06995PE=3SV=1	REV__tr|A0A7D6ZIH1|A0A7D6ZIH1_9CLOTAnti-sigma-WfactorRsiWOS=ClostridiumintestinaleOX=36845GN=HZF06_06995PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.3149597048759	2	472.312961	942.611368	3.277	0.0015478	0.4435	0.00020947	3.7205	0.0017573	472.31290083698883	59.81	0.49508	61.779	61.582	62.077	1.969					33	15	3	0	0	0	0.099302	1	25055	25055		49.554	1.9599	1	4446400	+		33902	15663	16713	16786	39538	39538					0.13776692005137647
TILVTQFTN	9	Unmodified	_TILVTQFTN_					0	0	0			REV__nc|ENSG00000162804|Q8TER0-5|SNED1	REV__nc|ENSG00000162804|Q8TER0-5|SNED1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.3185912966728	2	518.787307	1035.56006	1.4266	0.00074011	-2.8165	-0.0014612	-1.3899	-0.00072106	518.7857256742	77.666	0.54892	79.417	78.977	79.526	1.7514					31	17	3	0	0	0	0.082477	1	32446	32446		25.399	0	1	6909800	+		33903	10666	16714	16787	39539	39539					0.043703232404368464
TIMLIRLH	8	Unmodified	_TIMLIRLH_					0	0	0		tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.8726074099541	3	332.872279	995.595007	-1.8456	-0.00061435	1.9893	0.00066218	0.1437	4.7833E-05	332.87326083576136	40.441	0.49597	40.441	40.202	40.698	0					68	15	5	0	0	0	0.88663	3	16969	16893;16969;17008		6.2058	3.2105	1	240640000			33904	16217	16715	16788	39540;39541;39542	39541					0.09703287567390362
TIMLIRLH	8	Unmodified	_TIMLIRLH_					0	0	0		tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.8726989626884	3	332.872279	995.595007	-1.829	-0.00060883	2.2989	0.00076523	0.46984	0.0001564	332.8733695424742	40.97	0.57619	40.97	40.698	41.274	0					73	17	5	0	0	0	0.88663	3	17135	17057;17135;17174		3.2813	1.7994	1	278180000			33905	16217	16715	16788	39543;39544;39545	39544					0.09703287567390362
TIMLIRLH	8	Unmodified	_TIMLIRLH_					0	0	0		tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.8729431033134	3	332.872279	995.595007	1.1131	0.00037051	0.44437	0.00014792	1.5575	0.00051843	332.8726440450336	40.4	0.6273	40.713	40.381	41.008	0.31263					82	19	5	0	0	0	0.88663	3	16946	16946;16985;17064		3.2813	0	1	226760000			33906	16217	16715	16788	39546;39547;39548	39546					0.09703287567390362
TIMLIRLH	8	Unmodified	_TIMLIRLH_					0	0	0		tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8718139529228	3	332.872279	995.595007	0.21366	7.112E-05	-1.6319	-0.00054321	-1.4182	-0.00047209	332.87189799765605	37.735	0.477	39.556	39.224	39.701	1.8202					70	15	5	0	0	0	0.88663	1	15760	15760		3.2813	0	1	326050000			33907	16217	16715	16788	39549	39549					0.09703287567390362
TIMLIRLH	8	Unmodified	_TIMLIRLH_					0	0	0		tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	tr|A0A553SIT2|A0A553SIT2_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8722411990166	3	332.872279	995.595007	0.393	0.00013082	-1.3521	-0.00045009	-0.95915	-0.00031927	332.87203643665947	38.016	0.52402	39.836	39.701	40.225	1.8202					69	16	5	0	0	0	0.88663	2	16000	16000;16084		3.2813	1.6287	1	258050000			33908	16217	16715	16788	39550;39551	39550					0.09703287567390362
TINEKDRMRYF	11	Unmodified	_TINEKDRMRYF_					0	0	0			REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	REV__tr|A0A553SGR1|A0A553SGR1_NIACITransglutaminaseOS=NialliacirculansOX=1397GN=CEQ21_11305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	736.8713256716728	2	736.869368	1471.72418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.236	1	97.542	97.042	98.042	0.3062								0	0	0	0.63772	1	40902	40902		9.544	1.3884	1		+		33909	14764	16716	16789	39552	39552					0.00718972668846618
TINTRRDYTTF	11	Unmodified	_TINTRRDYTTF_					0	0	0			REV__ENSG00000265203|ENST00000584701|RBP3	REV__ENSG00000265203|ENST00000584701|RBP3	MSMS	GG20161007_CRH_Patient100_W632_02	4	694.3551513552666	2	694.351865	1386.68918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.722	1	43.614	43.114	44.114	1.8927								0	0	0	0.63773	1	17486	17486		8.7454	0.58988	1		+		33910	11994	16717	16790	39553	39553					0.011300531325332486
TINYFIPYI	9	Unmodified	_TINYFIPYI_					0	0	0			REV__tr|A0A7D7A4X1|A0A7D7A4X1_9CLOTN-acetyl-gamma-glutamyl-phosphatereductaseOS=ClostridiumintestinaleOX=36845GN=argCPE=3SV=1	REV__tr|A0A7D7A4X1|A0A7D7A4X1_9CLOTN-acetyl-gamma-glutamyl-phosphatereductaseOS=ClostridiumintestinaleOX=36845GN=argCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.3096191287041	2	572.307875	1142.6012	2.9734	0.0017017	1.3016	0.00074491	4.275	0.0024466	572.3082994654418	70.395	0.67	71.749	71.491	72.161	1.3536					44	20	3	0	0	0	0.37357	1	29515	29515		21.747	3.6117	1	2712300	+		33911	15876	16718	16791	39554	39554					0.0356008427991128
TINYLLPNM	9	Unmodified	_TINYLLPNM_					0	0	0			REV__nc|ENSG00000006576|Q8N3S3-4|PHTF2	REV__nc|ENSG00000006576|Q8N3S3-4|PHTF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7842285037041	2	539.78371	1077.55287	2.6546	0.0014329	-0.24508	-0.00013229	2.4095	0.0013006	539.7832197077774	78.116	0.91212	79.396	78.949	79.862	1.2809					90	29	5	0	0	0	0.34572	1	32788	32788		23.148	0	1	8955600	+		33912	8508	16719	16792	39555	39555					0.017192673683666726
TINYTVLT	8	Unmodified	_TINYTVLT_					0	0	0		ENSG00000171481|ENST00000304820|OR1L3	ENSG00000171481|ENST00000304820|OR1L3	ENSG00000171481|ENST00000304820|OR1L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	924.5071899294853	1	924.503674	923.496398	1.9364	0.0017902	-0.3776	-0.0003491	1.5588	0.0014411	924.5033135540294	59.307	0.41254	59.307	59.068	59.481	0					28	12	3	0	0	0	0.67986	1	24760	24760		32.305	1.6689	1	4645200			33913	4191	16720	16793	39556	39556					0.031589628033202644
TIPLSPPAKR	10	Unmodified	_TIPLSPPAKR_					0	0	0		nc|ENSG00000203706|Q5TG53|SERTAD4-AS1	nc|ENSG00000203706|Q5TG53|SERTAD4-AS1	nc|ENSG00000203706|Q5TG53|SERTAD4-AS1	MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3333007693291	2	540.332216	1078.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.687	1	69.009	68.509	69.509	0.32224								0	0	0	0.66166	1	28753	28753		1.6526	0	1				33914	7973	16721	16794	39557	39557					0.1136999763964468
TIPQVIEMI	9	Oxidation (M)	_TIPQVIEM(Oxidation (M))I_		TIPQVIEM(1)I		TIPQVIEM(57)I	0	0	1		tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2948486208916	2	530.291368	1058.56818	2.5509	0.0013527	2.9645	0.001572	5.5154	0.0029248	530.2929495606106	63.288	0.60061	65.232	64.905	65.505	1.9444					45	18	3	0	0	0	0.076627	1	26572	26572		57.471	9.1255	1	5904700			33915	17149	16722	16795	39558	39558		132			0.041241341655450015
TIPQVIEMI	9	Unmodified	_TIPQVIEMI_					0	0	0		tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	tr|A0A7D6ZVA5|A0A7D6ZVA5_9CLOTGerWfamilysporulationproteinOS=ClostridiumintestinaleOX=36845GN=ytfJPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2954589724541	2	522.293911	1042.57327	2.1513	0.0011236	0.65095	0.00033999	2.8023	0.0014636	522.2943585417024	80.747	0.61958	82.443	82.21	82.829	1.6959					64	19	5	0	0	0	0.13873	1	33807	33807		39.957	13.074	1	14580000			33916	17149	16722	16796	39559	39559					0.0536843802817657
TIPTRQTQTF	10	Unmodified	_TIPTRQTQTF_					0	0	0		ENST00000454171.1_1_7:84658221-84658887:+|nuORF	ENST00000454171.1_1_7:84658221-84658887:+|nuORF	ENST00000454171.1_1_7:84658221-84658887:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	596.2779418826103	2	596.81967	1191.62479	3.7298	0.002226	-2.2182	-0.0013238	1.5116	0.00090216	596.8182782670359	82.035	0.34843	83.705	83.45	83.799	1.67					15	10	2	0	0	0	0.12493	1	34334	34334		10.824	2.2306	1	858230			33917	6638	16723	16797	39560	39560					0.03663898046397662
TIPVQMLLE	9	Unmodified	_TIPVQMLLE_					0	0	0		ENSG00000174442|ENST00000307897|ZWILCH;nc|ENSG00000174442|Q9H900-2|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	ENSG00000174442|ENST00000307897|ZWILCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2947875857353	2	522.293911	1042.57327	3.2913	0.001719	-0.042322	-2.2105E-05	3.2489	0.0016969	522.2938168563815	81.133	0.65015	82.367	82.161	82.811	1.2332					75	20	5	0	0	0	0.27148	1	34214	34214		26.884	0	1	14968000			33918	4330	16724	16798	39561	39561					0.053684380281538324
TIQMAMGTII	10	Unmodified	_TIQMAMGTII_					0	0	0		ENST00000531673.5_1_11:112099351-112106686:+|nuORF	ENST00000531673.5_1_11:112099351-112106686:+|nuORF	ENST00000531673.5_1_11:112099351-112106686:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7842285037041	2	539.785395	1077.55624	1.4375	0.00077593	-2.9302	-0.0015817	-1.4927	-0.00080574	539.7834477530818	77.63	0.89089	79.381	79.041	79.932	1.7514					90	28	5	0	0	0	0.65574	2	32515	32464;32515		20.454	2.3186	1	11449000			33919	7170	16725	16799	39562;39563	39563					0.02056194150736701
TIQSITFLY	9	Unmodified	_TIQSITFLY_					0	0	0		CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;ENSG00000171316|ENST00000423902|CHD7;nc|ENSG00000171316|Q9P2D1-2|CHD7;nc|ENSG00000177200|Q3L8U1-2|CHD9;nc|ENSG00000177200|Q3L8U1-3|CHD9;ENSG00000177200|ENST00000447540|CHD9;ENST00000569225.5_1_16:53269177-53281416:+|nuORF	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant;nc|ENSG00000177200|Q3L8U1-2|CHD9	CHD7|p.S2860Kfs*9|1|0.3|ENSG00000171316|chr8:60865513-60865514|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	543.3002197146416	2	543.297507	1084.58046	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.022	1	41.339	40.839	41.839	0.31683								0	0	0	0.42693	1	17238	17238		2.0598	0	1				33920	153;4440	16726	16800	39564	39564					0.04155493900225338
TIQTIVIV	8	Unmodified	_TIQTIVIV_					0	0	0		ENST00000441966.1_1_6:29297957-29298365:-|nuORF	ENST00000441966.1_1_6:29297957-29298365:-|nuORF	ENST00000441966.1_1_6:29297957-29298365:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	886.5627319216728	1	886.560795	885.553519	1.7414	0.0015438	0.26323	0.00023337	2.0046	0.0017772	886.5606249414798	65.399	0.41298	65.399	65.166	65.579	0					24	12	3	0	0	0	0.39757	1	27263	27263		54.774	1.198	1	2097500			33921	6561	16727	16801	39565	39565					0.10616430079710426
TIRFHLRF	8	Unmodified	_TIRFHLRF_					0	0	0		ENST00000481456.1_1_6:31509365-31509719:-|nuORF	ENST00000481456.1_1_6:31509365-31509719:-|nuORF	ENST00000481456.1_1_6:31509365-31509719:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3182861208916	2	545.319443	1088.62433	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.219	1	72.544	72.044	73.044	0.32494								0	0	0	1.0178	1	30216	30216		9.3474	1.4373	1				33922	6825	16728	16802	39566	39566					0.08356567907890167
TIRKYGLSRL	10	Unmodified	_TIRKYGLSRL_					0	0	0			REV__tr|A0A7D6VND6|A0A7D6VND6_9CLOTFMN-bindingglutamatesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17415PE=3SV=1	REV__tr|A0A7D6VND6|A0A7D6VND6_9CLOTFMN-bindingglutamatesynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17415PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1801330447197	3	402.915423	1205.72444	1.9254	0.00077578	-1.03	-0.00041499	0.89544	0.00036079	402.9154891814101	40.187	0.21844	41.497	41.389	41.608	1.3102					9	6	2	0	0	0	0.12559	1	16848	16848		0.15932	0	1	860980	+		33923	15332	16729	16803	39567	39567					0.12980760451023343
TIRRFQEI	8	Unmodified	_TIRRFQEI_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-3|RGS22	REV__nc|ENSG00000132554|Q8NE09-3|RGS22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8043090701103	2	531.806365	1061.59818	3.4019	0.0018092	-1.15	-0.00061155	2.2519	0.0011976	531.8055404233152	74.319	0.85188	75.637	75.342	76.194	1.318					46	27	2	0	0	0	0.68174	1	31216	31216		32.117	3.6301	1	15376000	+		33924	9850	16730	16804	39568	39568					0.06984253945756791
TIRRFQEI	8	Unmodified	_TIRRFQEI_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-3|RGS22	REV__nc|ENSG00000132554|Q8NE09-3|RGS22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8054687380791	2	531.806365	1061.59818	3.2361	0.001721	-4.0727	-0.0021659	-0.83661	-0.00044491	531.8044907504207	73.846	0.39766	75.642	75.471	75.869	1.7962					24	12	3	0	0	0	0.59872	2	31018	30966;31018		40.449	19.577	1	11443000	+		33925	9850	16730	16804	39569;39570	39570					0.06984253945756791
TIRRFQEI	8	Unmodified	_TIRRFQEI_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-3|RGS22	REV__nc|ENSG00000132554|Q8NE09-3|RGS22	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	531.806365	1061.59818	3.2361	0.001721	-4.0727	-0.0021659	-0.83661	-0.00044491	531.8044907504207	73.846	0.39766	75.642	75.471	75.869	1.7962	0.0024486	-0.001397	NaN	40.449	24	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11443000	+		33926	9850	16730	16804							0.06984253945756791
TIRRVRKED	9	Unmodified	_TIRRVRKED_					0	0	0		ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	ENSG00000128052|ENST00000263923|KDR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2845641970634	3	391.566794	1171.67855	1.4803	0.00057963	1.5077	0.00059035	2.9879	0.00117	391.5672765214219	39.596	0.42954	41.459	41.216	41.646	1.8624					36	13	4	0	0	0	0.11944	1	16507	16507		0.96228	0.18574	1	8977600			33927	2357	16731	16805	39571	39571					0.09958115268796064
TIRYVIVGFVI	11	Unmodified	_TIRYVIVGFVI_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2659179568291	3	427.263941	1278.76999	2.1191	0.00090541	1.5292	0.00065335	3.6483	0.0015588	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	1.0362	1	17795	17795		1.3296	0.11481	1	48247000	+		33928	8609	16732	16806	39572	39572					0.14175985913402656
TIRYVIVGFVI	11	Unmodified	_TIRYVIVGFVI_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2650939822197	3	427.263941	1278.76999	2.3557	0.0010065	0.5594	0.00023901	2.9151	0.0012455	427.26411590084575	40.132	0.73301	41.442	41.086	41.819	1.3102					102	23	5	0	0	0	1.0362	1	16910	16910		1.3296	0.11481	1	54439000	+		33929	8609	16732	16806	39573	39573					0.14175985913402656
TIRYVIVGFVI	11	Unmodified	_TIRYVIVGFVI_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7007324099541	4	320.699775	1278.76999	1.0696	0.00034303	1.764	0.00056572	2.8336	0.00090875	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	1.0362	1	16998	16998		1.3296	1.3296	1	367210000	+		33930	8609	16732	16806	39574	39574					0.14175985913402656
TIRYVIVGFVI	11	Unmodified	_TIRYVIVGFVI_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2653991580009	3	427.263941	1278.76999	1.7969	0.00076775	1.0364	0.0004428	2.8333	0.0012106	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	1.0362	1	16753	16753		1.3296	0.11481	1	44576000	+		33931	8609	16732	16806	39575	39575					0.14175985913402656
TIRYVIVGFVI	11	Unmodified	_TIRYVIVGFVI_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7007934451103	4	320.699775	1278.76999	1.3893	0.00044555	-0.59585	-0.00019109	0.79347	0.00025447	320.6997533231677	40.294	1.1013	42.157	41.987	43.089	1.8624					85	34	3	0	0	0	1.0362	1	16971	16971		1.3296	0.11481	1	190230000	+		33932	8609	16732	16806	39576	39576					0.14175985913402656
TISLAIRVFLF	11	Unmodified	_TISLAIRVFLF_					0	0	0			REV__ENST00000373344.9_1_X:76940479-76944390:-|nuORF	REV__ENST00000373344.9_1_X:76940479-76944390:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2651855349541	3	427.263941	1278.76999	2.3581	0.0010075	0.7852	0.00033549	3.1433	0.001343	427.2641553664048	40.681	0.4704	42.007	41.834	42.305	1.3254					51	14	4	0	0	0	1.0224	1	17001	17001		2.4348	1.1051	1	26825000	+		33933	12696	16733	16807	39577	39577					0.14175985913402656
TISLAIRVFLF	11	Unmodified	_TISLAIRVFLF_					0	0	0			REV__ENST00000373344.9_1_X:76940479-76944390:-|nuORF	REV__ENST00000373344.9_1_X:76940479-76944390:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2654296755791	3	427.263941	1278.76999	1.7969	0.00076775	1.0364	0.0004428	2.8333	0.0012106	427.2642937840655	39.861	0.8644	41.723	41.123	41.987	1.8624					121	27	5	0	0	0	0.98969	1	16795	16795		4.4062	3.0765	1	44576000	+		33934	12696	16733	16807	39578	39578					0.14175985913402656
TISLSLIDI	9	Unmodified	_TISLSLIDI_					0	0	0			REV__nc|ENSG00000285467|P0CG22|DHRS4L1	REV__nc|ENSG00000285467|P0CG22|DHRS4L1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5812866091728	1	974.576839	973.569563	2.6794	0.0026113	-0.29075	-0.00028335	2.3887	0.002328	974.5771734382256	91.161	0.39017	91.351	91.108	91.498	0.19042					17	11	2	0	0	0	0.042029	1	38219	38219		74.423	0	1	2122300	+		33935	14567	16734	16808	39579	39579					0.08172091525955238
TISLSLIDI	9	Unmodified	_TISLSLIDI_					0	0	0			REV__nc|ENSG00000285467|P0CG22|DHRS4L1	REV__nc|ENSG00000285467|P0CG22|DHRS4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5834838747978	1	974.576839	973.569563	4.3701	0.004259	-1.6979	-0.0016548	2.6722	0.0026042	974.5746184899269	90.304	0.57574	91.286	91.014	91.59	0.98157					25	17	2	0	0	0	0.051699	1	38018	38018		67.344	9.8725	1	4512200	+		33936	14567	16734	16808	39580	39580					0.08172091525955238
TISLSLIDI	9	Unmodified	_TISLSLIDI_					0	0	0			REV__nc|ENSG00000285467|P0CG22|DHRS4L1	REV__nc|ENSG00000285467|P0CG22|DHRS4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5806152224541	1	974.576839	973.569563	4.1174	0.0040128	-3.6521	-0.0035593	0.4653	0.00045347	974.5730795931684	89.851	0.47719	91.256	90.923	91.4	1.4045					22	14	2	0	0	0	0.033794	1	37882	37882		81.613	0	1	3285200	+		33937	14567	16734	16808	39581	39581					0.08172091525955238
TITIHDLNV	9	Unmodified	_TITIHDLNV_					0	0	0			REV__nc|ENSG00000139155|Q9NYB5-4|SLCO1C1	REV__nc|ENSG00000139155|Q9NYB5-4|SLCO1C1	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2844116091728	2	513.284931	1024.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.183	1	60.183	59.683	60.683	0								0	0	0	0.30487	1	25098	25098		18.135	0	1		+		33938	10095	16735	16809	39582	39582					0.04401439097682669
TITIHDLNV	9	Unmodified	_TITIHDLNV_					0	0	0			REV__nc|ENSG00000139155|Q9NYB5-4|SLCO1C1	REV__nc|ENSG00000139155|Q9NYB5-4|SLCO1C1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2856323122978	2	513.284931	1024.55531	2.521	0.001294	-0.72483	-0.00037204	1.7961	0.00092193	513.2840822906094	59.559	0.25131	59.885	59.712	59.964	0.32553					14	7	2	0	0	0	0.44535	1	24950	24950		18.135	0	1	1302600	+		33939	10095	16735	16809	39583	39583					0.04401439097682669
TITLLLLLIV	10	Unmodified	_TITLLLLLIV_					0	0	0			REV__tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	REV__tr|A0A553SIP8|A0A553SIP8_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_15265PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2610961794853	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.84	1	105.89	105.39	106.39	0.05455								0	0	0	0.66222	1	44971	44971		0.69767	0	1		+		33940	14861	16736	16810	39584	39584					0.21183253312983652
TITMADSDFL	10	Unmodified	_TITMADSDFL_					0	0	0		nc|ENSG00000116171|P22307-6|SCP2;nc|ENSG00000116171|P22307-2|SCP2;nc|ENSG00000116171|P22307-4|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2;ENSG00000116171|ENST00000371514|SCP2	nc|ENSG00000116171|P22307-6|SCP2	nc|ENSG00000116171|P22307-6|SCP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.2601806521416	2	557.260265	1112.50598	1.1556	0.00064399	-0.9514	-0.00053018	0.20423	0.00011381	557.2594890250972	95.409	0.2485	95.409	95.291	95.539	0					12	8	2	0	0	0	0.87343	1	39910	39910		4.3292	0	1	698430			33941	1955	16737	16811	39585	39585					-0.04577636973453991
TITMADSDFL	10	Unmodified	_TITMADSDFL_					0	0	0		nc|ENSG00000116171|P22307-6|SCP2;nc|ENSG00000116171|P22307-2|SCP2;nc|ENSG00000116171|P22307-4|SCP2;nc|ENSG00000116171|P22307-7|SCP2;nc|ENSG00000116171|P22307-8|SCP2;ENSG00000116171|ENST00000371514|SCP2	nc|ENSG00000116171|P22307-6|SCP2	nc|ENSG00000116171|P22307-6|SCP2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	557.260265	1112.50598	2.6379	0.00147	-3.8065	-0.0021212	-1.1686	-0.00065122	557.258335093955	95.013	0.28201	95.136	95.02	95.302	0.12331	-0.021427	0.00039076	NaN	4.3292	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	310130			33942	1955	16737	16811							-0.04577636973453991
TITPIIFTNL	10	Unmodified	_TITPIIFTNL_					0	0	0		tr|A0A553SGP4|A0A553SGP4_NIACIPTSglucosetransportersubunitIICBAOS=NialliacirculansOX=1397GN=CEQ21_11270PE=4SV=1	tr|A0A553SGP4|A0A553SGP4_NIACIPTSglucosetransportersubunitIICBAOS=NialliacirculansOX=1397GN=CEQ21_11270PE=4SV=1	tr|A0A553SGP4|A0A553SGP4_NIACIPTSglucosetransportersubunitIICBAOS=NialliacirculansOX=1397GN=CEQ21_11270PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.8370849490166	2	566.834257	1131.65396	3.1399	0.0017798	1.3744	0.00077906	4.5143	0.0025589	566.8360018956603	61.206	0.27315	62.626	62.473	62.746	1.4196					18	8	3	0	0	0	0.81324	1	25696	25696		10.824	0	1	1770500			33943	16115	16738	16812	39586	39586					0.09340042342728339
TITPPLGC	8	Unmodified	_TITPPLGC_					0	0	0			REV__nc|ENSG00000203710|P17927|CR1	REV__nc|ENSG00000203710|P17927|CR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	801.4755737185478	1	801.417502	800.410226	1.7363	0.0013915	3.9495	0.0031652	5.6858	0.0045567	801.4212569462876	95.407	0.22007	95.407	95.291	95.511	0					10	7	2	0	0	0	0.87803	1	39885	39885		10.183	0	1	2774000	+		33944	11761	16739	16813	39587	39587					0.0020367969698327215
TIVDNPPCYL	10	Unmodified	_TIVDNPPCYL_					0	0	0			REV__ENST00000513888.5_1_5:6600041-6604993:-|nuORF	REV__ENST00000513888.5_1_5:6600041-6604993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.2863647341728	2	567.778625	1133.5427	2.2158	0.0012581	0.91627	0.00052024	3.1321	0.0017783	567.7789010672466	63.794	0.60163	65.202	64.958	65.56	1.4071					58	18	4	0	0	0	0.846	1	26855	26855		7.2892	0	1	5732300	+		33945	13590	16740	16814	39588	39588					-0.018733403569058282
TIVDSVGLV	9	Unmodified	_TIVDSVGLV_					0	0	0			REV__nc|ENSG00000163840|Q8TDB6-2|DTX3L	REV__nc|ENSG00000163840|Q8TDB6-2|DTX3L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5215942263603	1	902.519325	901.512048	2.6383	0.0023811	0.43026	0.00038832	3.0686	0.0027694	902.5194857147502	62.799	0.56913	64.212	63.807	64.376	1.4134					42	18	3	0	0	0	0.046276	1	26227	26227		70.716	0	1	5489900	+		33946	10701	16741	16815	39589	39589					0.05735249320389357
TIVDVPSQNL	10	Unmodified	_TIVDVPSQNL_					0	0	0			REV__PLXNC1|p.K1167_G1171delinsS|1|0.04|ENSG00000136040|chr12:94265128-94265139|AAATTAACAAGG/-|inframe_deletion	REV__PLXNC1|p.K1167_G1171delinsS|1|0.04|ENSG00000136040|chr12:94265128-94265139|AAATTAACAAGG/-|inframe_deletion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3004028201103	2	543.295496	1084.57644	3.2529	0.0017673	2.6355	0.0014319	5.8884	0.0031991	543.2982594551357	81.305	0.37209	82.538	82.408	82.78	1.2332					28	11	3	0	0	0	0.44465	1	34158	34158		30.637	6.616	1	2469800	+		33947	14602	16742	16816	39590	39590					0.03753404406529626
TIVDVPSQNL	10	Unmodified	_TIVDVPSQNL_					0	0	0			REV__PLXNC1|p.K1167_G1171delinsS|1|0.04|ENSG00000136040|chr12:94265128-94265139|AAATTAACAAGG/-|inframe_deletion	REV__PLXNC1|p.K1167_G1171delinsS|1|0.04|ENSG00000136040|chr12:94265128-94265139|AAATTAACAAGG/-|inframe_deletion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	543.295496	1084.57644	2.5426	0.0013814	4.6913	0.0025488	7.2339	0.0039301	543.2983230249254	80.898	0.37276	82.594	82.425	82.798	1.6959	0.028099	0.00072457	NaN	30.637	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2303000	+		33948	14602	16742	16816							0.03753404406529626
TIVGNPRRKGP	11	Unmodified	_TIVGNPRRKGP_					0	0	0			REV__nc|ENSG00000122068|Q96QD9-4|FYTTD1	REV__nc|ENSG00000122068|Q96QD9-4|FYTTD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8570434451103	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	1.037	1	31117	31117		1.0715	0.5467	1	3279500	+		33949	9603	16743	16817	39591	39591					0.11018705648439209
TIVILIMR	8	Unmodified	_TIVILIMR_					0	0	0		ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	ENSG00000174804|ENST00000531380|FZD4	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2075683474541	3	320.208779	957.604509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.334	1	62.334	61.834	62.834	0								0	0	0	1.0178	1	25988	25988		0.45834	0	1				33950	4343	16744	16818	39592	39592					0.12401055852910758
TIWKKRRK	8	Unmodified	_TIWKKRRK_					0	0	0			REV__ENST00000439685.6_1_3:112358751-112359896:-|nuORF	REV__ENST00000439685.6_1_3:112358751-112359896:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3633300662041	2	558.361642	1114.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.621	1	96.906	96.406	97.406	0.28442								0	0	0	1.0178	1	40655	40655		2.5775	0.27475	1		+		33951	13076	16745	16819	39593	39593					0.15596518724646558
TIWYKVKDKFR	11	Unmodified	_TIWYKVKDKFR_					0	0	0			REV__tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	REV__tr|A0A7D6VT56|A0A7D6VT56_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01550PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	743.2057372927666	2	742.424636	1482.83472	2.6608	0.0019754	-0.88454	-0.00065671	1.7762	0.0013187	742.9235469077553	99.817	0.12522	100.01	99.926	100.05	0.19767					6	5	2	0	0	0	1.0362	1	42007	42007		1.3295	0	1	858040	+		33952	15477	16746	16820	39594	39594					0.11261560719390218
TIYEFEVVY	9	Unmodified	_TIYEFEVVY_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.7858764529228	2	581.786973	1161.55939	0.75293	0.00043804	0.88957	0.00051754	1.6425	0.00095559	581.7866728490317	53.642	0.36427	55.612	55.325	55.69	1.9697					16	11	2	0	0	0	0.12174	1	22486	22486		42.095	11.458	1	1413300	+		33953	9832	16747	16821	39595	39595					-0.014925161992550784
TIYEFEVVY	9	Unmodified	_TIYEFEVVY_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	581.786973	1161.55939	1.4693	0.00085485	0.20653	0.00012015	1.6759	0.000975	581.7864693055611	54.148	0.47752	55.553	55.167	55.645	1.4048	-0.029557	-0.00025857	NaN	42.095	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	779680	+		33954	9832	16747	16821							-0.014925161992550784
TIYEFEVVY	9	Unmodified	_TIYEFEVVY_					0	0	0			REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	REV__nc|ENSG00000131951|Q6ZRR7-2|LRRC9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	581.786973	1161.55939	0.75293	0.00043804	0.88957	0.00051754	1.6425	0.00095559	581.7866728490317	53.642	0.36427	55.612	55.325	55.69	1.9697	0.029557	0.00053621	NaN	42.095	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1413300	+		33955	9832	16747	16821							-0.014925161992550784
TKAGGPRR	8	Unmodified	_TKAGGPRR_					0	0	0		ENST00000491292.5_1_2:128015174-128017132:-|nuORF	ENST00000491292.5_1_2:128015174-128017132:-|nuORF	ENST00000491292.5_1_2:128015174-128017132:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7521545290947	2	421.751393	841.488233	1.9995	0.0008433	0.32992	0.00013914	2.3294	0.00098244	421.7514766676942	71.697	0.60223	72.021	71.72	72.322	0.32359					52	18	4	0	0	0	0.89178	1	29978	29978		0.69038	0	1	19699000			33956	6911	16748	16822	39596	39596					0.061148733972345326
TKARKRRRRR	10	Unmodified	_TKARKRRRRR_					0	0	0		nc|ENSG00000105549|Q9P2T0-2|SPMAP2;ENSG00000105549|ENST00000342640|THEG	nc|ENSG00000105549|Q9P2T0-2|SPMAP2	nc|ENSG00000105549|Q9P2T0-2|SPMAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	347.5475341677666	4	346.730264	1382.89195	1.3802	0.00047856	4.0196	0.0013937	5.3998	0.0018723	346.98192365165784	42.374	0.47678	42.695	42.404	42.88	0.32058					20	15	2	0	0	0	0.1256	1	17798	17798		0.62683	0.21856	1	532780			33957	1524	16749	16823	39597	39597					0.21581885558998692
TKARRISDKF	10	Unmodified	_TKARRISDKF_					0	0	0			REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3580200076103	2	611.356754	1220.69895	2.531	0.0015474	-0.25657	-0.00015686	2.2744	0.0013905	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.63205	1	32830	32830		21.537	6.6987	1	7141600	+		33958	15798	16750	16824	39598	39598					0.09743285928584555
TKARRISDKF	10	Unmodified	_TKARRISDKF_					0	0	0			REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3577148318291	2	611.356754	1220.69895	1.8236	0.0011148	-0.11816	-7.2239E-05	1.7054	0.0010426	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.80702	1	32622	32622		11.495	4.7715	1	5176900	+		33959	15798	16750	16824	39599	39599					0.09743285928584555
TKARRISDKF	10	Unmodified	_TKARRISDKF_					0	0	0			REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	REV__tr|A0A7D6ZZN2|A0A7D6ZZN2_9CLOTDecarboxylating6-phosphogluconatedehydrogenaseOS=ClostridiumintestinaleOX=36845GN=gndPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3555786013603	2	611.356754	1220.69895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.507	1	79.259	78.759	79.759	1.7514								0	0	0	0.65303	1	32503	32503		11.495	3.3392	1		+		33960	15798	16750	16824	39600	39600					0.09743285928584555
TKCGVKRM	8	Unmodified	_TKCGVKRM_					0	0	0			REV__tr|A0A7D6ZQN6|A0A7D6ZQN6_9CLOTPutativepyruvate,phosphatedikinaseregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01030PE=3SV=1	REV__tr|A0A7D6ZQN6|A0A7D6ZQN6_9CLOTPutativepyruvate,phosphatedikinaseregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01030PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.1970703005791	3	308.170219	921.488827	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.376	1	14.489	13.989	14.989	0.11295								0	0	0	1.0178	1	5964	5964		0.45834	0	1		+		33961	15684	16751	16825	39601	39601					0.024942087304225424
TKEKKLLI	8	Unmodified	_TKEKKLLI_					0	0	0		tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	tr|A0A7D6VQ03|A0A7D6VQ03_9CLOTPD40domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.8274108767509	2	486.826235	971.637917	3.4896	0.0016989	-1.2592	-0.00061299	2.2305	0.0010859	486.8256482782197	107.69	0.27667	107.74	107.6	107.88	0.052452					55	14	6	0	0	0	0.89181	1	46078	46078		0.6015	0	1	1003499999.9999999			33962	16780	16752	16826	39602	39602					0.15096380896466144
TKERKKSK	8	Unmodified	_TKERKKSK_					0	0	0		ENSG00000154262|ENST00000284425|ABCA6;nc|ENSG00000154262|Q8N139-2|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	ENSG00000154262|ENST00000284425|ABCA6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.3208801150322	2	502.81419	1003.61383	2.0321	0.0010218	-1.571	-0.0007899	0.46113	0.00023186	502.8134541028111	81.541	1.0218	81.541	81.133	82.154	0					97	33	5	0	0	0	0.89181	1	33855	33855		0.6015	0	1	265370000			33963	3380	16753	16827	39603	39603					0.11216540462794455
TKFFQRWA	8	Unmodified	_TKFFQRWA_					0	0	0			REV__tr|A0A7D6VS95|A0A7D6VS95_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15195PE=4SV=1	REV__tr|A0A7D6VS95|A0A7D6VS95_9CLOTHADfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_15195PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2916747927666	2	542.290351	1082.56615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.713	1	27.43	26.93	27.93	1.7167								0	0	0	1.0178	1	10752	10752		2.3027	0	1		+		33964	15436	16754	16828	39604	39604					0.028168862625989277
TKGPLKQK	8	Unmodified	_TKGPLKQK_					0	0	0		ENST00000524244.5_1_5:159849319-159849927:+|nuORF;ENST00000523659.5_1_5:159849319-159851384:+|nuORF;ENST00000519287.1_1_5:159849240-159855685:+|nuORF;ENSG00000164611|ENST00000352433|PTTG1;chr5:160422155-160422302|428|46.64|0.56|6.38|+|ENST00000520452|PTTG1,PTTG1	ENST00000524244.5_1_5:159849319-159849927:+|nuORF	ENST00000524244.5_1_5:159849319-159849927:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1280090212822	3	300.527277	898.560001	-0.12981	-3.9012E-05	-0.45191	-0.00013581	-0.58172	-0.00017482	300.5271498018813	23.379	0.52285	25.03	24.777	25.3	1.6511					19	16	2	0	0	0	2.3239	1	9796	9796		0.30703	0	1	316240			33965	267	16755	16829	39605	39605					0.10666368031081674
TKGRGAAG	8	Unmodified	_TKGRGAAG_					0	0	0			REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	717.4026367068291	1	717.400212	716.392936	2.6305	0.0018872	1.2462	0.000894	3.8767	0.0027812	717.4008616460395	103.86	0.11592	104.02	103.97	104.09	0.16055					6	5	2	0	0	0	0.89181	1	43890	43890		0.6015	0	1	22244000	+		33966	13712	16756	16830	39606	39606					0.023395202061919917
TKGRGAAG	8	Unmodified	_TKGRGAAG_					0	0	0			REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	717.400212	716.392936	1.4024	0.0010061	4.3651	0.0031315	5.7676	0.0041377	717.4045881126426	103.89	0.07193	103.89	103.86	103.93	0	-0.064175	0.0017369	NaN	0.6015	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10612000	+		33967	13712	16756	16830							0.023395202061919917
TKGRGAAG	8	Unmodified	_TKGRGAAG_					0	0	0			REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	717.400212	716.392936	2.7055	0.001941	2.9953	0.0021488	5.7008	0.0040898	717.402566623905	103.89	0.073219	103.95	103.9	103.97	0.059502	-0.0028162	0.00075419	NaN	0.6015	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10921000	+		33968	13712	16756	16830							0.023395202061919917
TKGRGAAG	8	Unmodified	_TKGRGAAG_					0	0	0			REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	REV__ENST00000531499.2_1_14:91699993-91700095:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	717.400212	716.392936	2.6305	0.0018872	1.2462	0.000894	3.8767	0.0027812	717.4008616460395	103.86	0.11592	104.02	103.97	104.09	0.16055	0.066991	-0.00050061	NaN	0.6015	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22244000	+		33969	13712	16756	16830							0.023395202061919917
TKHKLTQRR	9	Unmodified	_TKHKLTQRR_					0	0	0		ENST00000569677.1_1_16:79246629-79246764:-|nuORF	ENST00000569677.1_1_16:79246629-79246764:-|nuORF	ENST00000569677.1_1_16:79246629-79246764:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3575927615166	2	584.357088	1166.69962	1.9193	0.0011216	-1.138	-0.00066499	0.78131	0.00045656	584.356543420618	74.98	1.9912	74.98	74.173	76.164	0					175	62	4	0	0	0	0.85019	1	31511	31511		0.52476	0	1	6168700			33970	7382	16757	16831	39607	39607					0.12294125368293862
TKHKLTQRR	9	Unmodified	_TKHKLTQRR_					0	0	0		ENST00000569677.1_1_16:79246629-79246764:-|nuORF	ENST00000569677.1_1_16:79246629-79246764:-|nuORF	ENST00000569677.1_1_16:79246629-79246764:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3575317263603	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.85019	2	31394	31394;31620		0.52476	0	1	7390500			33971	7382	16757	16831	39608;39609	39608					0.12294125368293862
TKIGTRILH	9	Unmodified	_TKIGTRILH_					0	0	0		tr|A0A553SNG0|A0A553SNG0_NIACIPhagetailsheathfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24415PE=4SV=1	tr|A0A553SNG0|A0A553SNG0_NIACIPhagetailsheathfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24415PE=4SV=1	tr|A0A553SNG0|A0A553SNG0_NIACIPhagetailsheathfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_24415PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	346.0695373415947	3	346.885464	1037.63456	0.23508	8.1544E-05	1.3188	0.00045746	1.5539	0.00053901	346.88589375612986	21.062	0.18299	21.273	21.135	21.318	0.21024					9	5	2	0	0	0	0.11938	1	8760	8760		1.1933	0	1	427720			33972	16419	16758	16832	39610	39610					0.11725130842478393
TKIKKKGV	8	Unmodified	_TKIKKKGV_					0	0	0		ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1282531619072	3	301.211289	900.612037	0.21107	6.3576E-05	3.3843	0.0010194	3.5954	0.001083	301.2123167477276	25.999	0.69783	26.251	25.797	26.495	0.25197					36	22	2	0	0	0	2.3239	1	10922	10922		0	0	1	1397900			33973	1409	16759	16833	39611	39611					0.1577553144485364
TKIKKKGV	8	Unmodified	_TKIKKKGV_					0	0	0		ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	ENSG00000102974|ENST00000264010|CTCF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	301.211289	900.612037	-0.096878	-2.9181E-05	4.5407	0.0013677	4.4438	0.0013385	301.2127190705995	24.345	0.73872	26.03	25.443	26.181	1.6845	-0.11081	0.00046524	NaN	0	41	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1526700			33974	1409	16759	16833							0.1577553144485364
TKIPAVFK	8	Unmodified	_TKIPAVFK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2877685427666	2	452.286746	902.558939	1.0231	0.00046274	0.7576	0.00034265	1.7807	0.0008054	452.287079648547	25.422	0.98314	25.422	24.888	25.871	0					81	31	4	0	0	0	0.18133	5	10575	10525;10575;10612;10652;10724		82.529	19.957	1	11543000		+	33975	339	16760	16834	39612;39613;39614;39615;39616	39613					0.10376153662184606
TKIPAVFK	8	Unmodified	_TKIPAVFK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2875244021416	2	452.286746	902.558939	1.4177	0.00064121	0.70006	0.00031663	2.1178	0.00095784	452.28699603463747	25.005	0.73919	25.257	24.842	25.582	0.25197					62	23	4	0	0	0	0.155	4	10442	10342;10393;10442;10494		85.642	13.719	1	4936100		+	33976	339	16760	16834	39617;39618;39619;39620	39619					0.10376153662184606
TKIPAVFK	8	Unmodified	_TKIPAVFK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2875549197197	2	452.286746	902.558939	1.5426	0.0006977	-0.57005	-0.00025783	0.97257	0.00043988	452.28642497387733	23.878	0.55387	25.119	24.715	25.268	1.241					39	17	3	0	0	0	0.37214	3	10007	9907;9957;10007		60.074	10.141	1	2375800		+	33977	339	16760	16834	39621;39622;39623	39623					0.10376153662184606
TKIPAVFK	8	Unmodified	_TKIPAVFK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2870971560478	2	452.286746	902.558939	0.74909	0.00033881	0.55181	0.00024958	1.3009	0.00058838	452.28698937841864	23.418	0.55397	25.069	24.686	25.24	1.6511					37	17	3	0	0	0	0.43377	3	9812	9713;9760;9812		52.268	11.959	1	2308900		+	33978	339	16760	16834	39624;39625;39626	39626					0.10376153662184606
TKKGVVTP	8	Unmodified	_TKKGVVTP_					0	0	0		nc|ENSG00000156256|Q9Y5T5-5|USP16;ENST00000474835.5_1_21:30400234-30414894:+|nuORF;nc|ENSG00000156256|Q9Y5T5-3|USP16;nc|ENSG00000156256|Q9Y5T5-2|USP16;ENSG00000156256|ENST00000399976|USP16	nc|ENSG00000156256|Q9Y5T5-5|USP16	nc|ENSG00000156256|Q9Y5T5-5|USP16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2603027224541	2	415.260728	828.506903	2.0156	0.000837	-3.4747	-0.0014429	-1.4591	-0.00060592	415.2591388800214	78.305	0.54134	78.614	78.323	78.864	0.30932					36	16	3	0	0	0	0.89008	1	32735	32735		2.5775	0	1	3099800			33979	3441	16761	16835	39627	39627					0.08578990248417995
TKKKILEL	8	Unmodified	_TKKKILEL_					0	0	0		tr|A0A553SLT2|A0A553SLT2_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21255PE=4SV=1	tr|A0A553SLT2|A0A553SLT2_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21255PE=4SV=1	tr|A0A553SLT2|A0A553SLT2_NIACILacIfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_21255PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8256713747978	2	486.826235	971.637917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.8	1	107.96	107.46	108.46	0.15781								0	0	0	1.0178	1	46467	46467		2.0598	0	1				33980	16353	16762	16836	39628	39628					0.15096380896466144
TKKKKKAK	8	Unmodified	_TKKKKKAK_					0	0	0		ENSG00000157895|ENST00000288757|C12orf43	ENSG00000157895|ENST00000288757|C12orf43	ENSG00000157895|ENST00000288757|C12orf43	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.3380309939384	2	480.339844	958.665135	3.1546	0.0015153	-3.5364	-0.0016987	-0.38176	-0.00018338	480.33767929475925	109.57	0.62939	109.73	109.47	110.09	0.1548					51	23	3	0	0	0	0.89198	1	47495	47495		0	0	1	6933300			33981	3485	16763	16837	39629	39629					0.18414909227499265
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	650.9708129763603	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.34	1	106.4	105.9	106.9	0.05455								0	0	0	0.66264	1	45290	45290		0	0	1				33982	5930	16764	16838	39630	39630					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	650.9702636599541	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.45	1	106.5	106	107	0.05455								0	0	0	0.66264	1	45356	45356		0	0	1				33983	5930	16764	16838	39631	39631					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9688598513603	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.37	1	105.53	105.03	106.03	0.16679								0	0	0	0.66264	1	44800	44800		0	0	1				33984	5930	16764	16838	39632	39632					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9696533083916	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.47	1	105.64	105.14	106.14	0.16679								0	0	0	0.66264	1	44870	44870		0	0	1				33985	5930	16764	16838	39633	39633					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9709960818291	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.59	1	105.76	105.26	106.26	0.16679								0	0	0	0.66264	1	44947	44947		0	0	1				33986	5930	16764	16838	39634	39634					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9697143435478	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.7	1	105.87	105.37	106.37	0.16679								0	0	0	0.66264	1	45024	45024		0	0	1				33987	5930	16764	16838	39635	39635					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9706909060478	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.81	1	105.97	105.47	106.47	0.16679								0	0	0	0.66264	1	45100	45100		0	0	1				33988	5930	16764	16838	39636	39636					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9681274294853	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.18	1	106.35	105.85	106.85	0.16174								0	0	0	0.66264	1	45360	45360		0	0	1				33989	5930	16764	16838	39637	39637					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9691650271416	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.3	1	106.46	105.96	106.96	0.16174								0	0	0	0.66264	1	45439	45439		0	0	1				33990	5930	16764	16838	39638	39638					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9681274294853	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.55	1	106.71	106.21	107.21	0.16174								0	0	0	0.66264	1	45595	45595		0	0	1				33991	5930	16764	16838	39639	39639					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9683105349541	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.66	1	106.82	106.32	107.32	0.16174								0	0	0	0.66264	1	45675	45675		0	0	1				33992	5930	16764	16838	39640	39640					0.2810955632680816
TKKKKKKKKR	10	Unmodified	_TKKKKKKKKR_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	650.9689819216728	2	650.966806	1299.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.77	1	106.93	106.43	107.43	0.16174								0	0	0	0.66264	1	45739	45739		0	0	1				33993	5930	16764	16838	39641	39641					0.2810955632680816
TKKKKKKKKRK	11	Unmodified	_TKKKKKKKKRK_					0	0	0		ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	ENST00000340726.7_1_8:72274331-72274436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	715.1254150271416	2	715.014287	1428.01402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.15	1	116.34	115.84	116.84	0.19572								0	0	0	0.63775	1	50270	50270		0	0	1				33994	5930	16765	16839	39642	39642					0.31713489797994043
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3061706423759	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.785	1	15.785	15.285	16.285	0								0	0	0	0.66222	1	6554	6554		0.69767	0	1		+		33995	13003	16766	16840	39643	39643					0.27310751578238524
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3055908083916	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.414	1	18.414	17.914	18.914	0								0	0	0	0.66255	1	7652	7652		0.13989	0	1		+		33996	13003	16766	16840	39644	39644					0.27310751578238524
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3060790896416	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.092	1	16.222	15.722	16.722	0.13022								0	0	0	0.66255	1	6680	6680		0.13989	0	1		+		33997	13003	16766	16840	39645	39645					0.27310751578238524
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.3060485720634	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.449	1	21.672	21.172	22.172	0.223								0	0	0	0.66255	1	8916	8916		0.13989	0	1		+		33998	13003	16766	16840	39646	39646					0.27310751578238524
TKKKKKKLIR	10	Unmodified	_TKKKKKKLIR_					0	0	0			REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	REV__ENST00000427154.1_1_1:23346896-23414436:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3060180544853	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.469	1	13.163	12.663	13.663	0.69396								0	0	0	0.66255	1	5179	5179		0.13989	0	1		+		33999	13003	16766	16840	39647	39647					0.27310751578238524
TKKLLTTT	8	Unmodified	_TKKLLTTT_					0	0	0		tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	453.2860595583916	2	453.286943	904.559333	1.5646	0.00070923	-3.5766	-0.0016212	-2.0119	-0.00091198	453.28520046301355	70.288	1.1677	70.288	69.675	70.842	0					85	37	3	0	0	0	0.89198	4	29069	29069;29122;29313;29363		0	0	1	3472100			34000	17313	16767	16841	39648;39649;39650;39651	39648					0.10323528591345621
TKKLLTTT	8	Unmodified	_TKKLLTTT_					0	0	0		tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	tr|A0A7D7A6Y0|A0A7D7A6Y0_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11810PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.2869445681572	2	453.286943	904.559333	1.8447	0.00083616	-3.157	-0.001431	-1.3123	-0.00059486	453.28529987264477	70.059	1.3588	70.381	69.689	71.048	0.32224					96	43	3	0	0	0	0.89198	7	29157	29157;29205;29256;29304;29358;29412;29531		0	0	1	4387700			34001	17313	16767	16841	39652;39653;39654;39655;39656;39657;39658	39652					0.10323528591345621
TKKRRILI	8	Unmodified	_TKKRRILI_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3592407107353	2	514.358568	1026.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.88	1	103.05	102.55	103.55	0.16445								0	0	0	1.0178	1	43340	43340		0.6015	0	1				34002	1885	16768	16842	39659	39659					0.19030000493125954
TKKRRILI	8	Unmodified	_TKKRRILI_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3645507693291	2	514.358568	1026.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.97	1	103.14	102.64	103.64	0.16445								0	0	0	1.0178	1	43379	43379		0.6015	0	1				34003	1885	16768	16842	39660	39660					0.19030000493125954
TKKRRILI	8	Unmodified	_TKKRRILI_					0	0	0		ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3620483279228	2	514.358568	1026.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.11	1	103.28	102.78	103.78	0.16445								0	0	0	1.0178	1	43441	43441		0.6015	0	1				34004	1885	16768	16842	39661	39661					0.19030000493125954
TKKSRRDA	8	Unmodified	_TKKSRRDA_					0	0	0			REV__ENST00000438543.5_1_4:184124733-184129253:+|nuORF	REV__ENST00000438543.5_1_4:184124733-184129253:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2819396853447	2	481.280515	960.546476	2.7024	0.0013006	-0.32411	-0.00015599	2.3783	0.0011446	481.28000943754137	78.294	0.42382	79.561	79.363	79.787	1.2668					37	13	4	0	0	0	0.89051	1	32878	32878		2.3027	0	1	10383000	+		34005	13069	16769	16843	39662	39662					0.06462510251844833
TKLARGAA	8	Unmodified	_TKLARGAA_					0	0	0			REV__tr|A0A553SJY7|A0A553SJY7_NIACICelldivisionproteinFtsAOS=NialliacirculansOX=1397GN=CEQ21_17585PE=4SV=1	REV__tr|A0A553SJY7|A0A553SJY7_NIACICelldivisionproteinFtsAOS=NialliacirculansOX=1397GN=CEQ21_17585PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.2450134158134	2	394.24287	786.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.527	1	71.851	71.351	72.351	0.32359								0	0	0	1.0178	1	29932	29932		2.5775	0	1		+		34006	14924	16770	16844	39663	39663					0.06940952791410382
TKLGKKTKKT	10	Unmodified	_TKLGKKTKKT_					0	0	0			REV__HIVEP3|p.S1384Rfs*13|1|0.11|ENSG00000127124|chr1:41580646-41580646|A/-|frameshift_variant	REV__HIVEP3|p.S1384Rfs*13|1|0.11|ENSG00000127124|chr1:41580646-41580646|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2501403689384	3	378.251924	1131.73394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.63	1	100.63	100.13	101.13	0								0	0	0	0.66254	1	42126	42126		0.15932	0	1		+		34007	9709	16771	16845	39664	39664					0.17334528736546417
TKLKAPLA	8	Unmodified	_TKLKAPLA_					0	0	0			REV__ENST00000597646.5_1_19:19021902-19030157:-|nuORF	REV__ENST00000597646.5_1_19:19021902-19030157:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	420.7875244021416	2	421.278921	840.543289	3.0782	0.0012968	2.972	0.001252	6.0502	0.0025488	421.28060189163045	107.81	0.22874	107.96	107.84	108.07	0.15781					38	13	4	0	0	0	2.3239	1	46494	46494		0.79363	0	1	2649600000	+		34008	14102	16772	16846	39665	39665					0.1166386714512555
TKLKNRTP	8	Unmodified	_TKLKNRTP_					0	0	0			REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2975341677666	2	479.295633	956.576714	3.4243	0.0016412	0.62343	0.00029881	4.0477	0.0019401	479.29589512949076	89.17	0.38579	89.393	89.197	89.583	0.22359					30	11	4	0	0	0	0.89051	1	37368	37368		2.3027	0	1	1510300	+		34009	13539	16773	16847	39666	39666					0.09668868917037798
TKLKNRTP	8	Unmodified	_TKLKNRTP_					0	0	0			REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	479.295633	956.576714	2.6697	0.0012796	0.20937	0.00010035	2.879	0.0013799	479.29556752331484	89.33	0.37923	89.33	89.146	89.526	0	-0.10935	-0.00017017	NaN	2.3027	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1563300	+		34010	13539	16773	16847							0.09668868917037798
TKLKNRTP	8	Unmodified	_TKLKNRTP_					0	0	0			REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	479.295633	956.576714	3.4243	0.0016412	0.62343	0.00029881	4.0477	0.0019401	479.29589512949076	89.17	0.38579	89.393	89.197	89.583	0.22359	-0.04596	0.00022674	NaN	2.3027	30	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1510300	+		34011	13539	16773	16847							0.09668868917037798
TKLKNRTP	8	Unmodified	_TKLKNRTP_					0	0	0			REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	REV__ENST00000506455.5_1_4:156651268-156651472:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	479.295633	956.576714	4.6478	0.0022277	1.4744	0.00070668	6.1223	0.0029344	479.29619666355677	88.107	0.31963	89.554	89.38	89.699	1.4467	0.11473	0.0010425	NaN	2.3027	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1512300	+		34012	13539	16773	16847							0.09668868917037798
TKLKPKRKI	9	Unmodified	_TKLKPKRKI_					0	0	0		ENST00000519685.5_1_8:22875776-22875938:+|nuORF	ENST00000519685.5_1_8:22875776-22875938:+|nuORF	ENST00000519685.5_1_8:22875776-22875938:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2615234255791	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.08	1	109.08	108.58	109.58	0								0	0	0	0.42693	1	47132	47132		0.20686	0	1				34013	7072	16774	16848	39667	39667					0.20914842698698521
TKLKRIGK	8	Unmodified	_TKLKRIGK_					0	0	0			REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2	REV__nc|ENSG00000127507|Q9UHX3-5|ADGRE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	472.3282043337822	2	472.324194	942.633835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.835	1	88.835	88.335	89.335	0								0	0	0	1.0178	1	37139	37139		0.6015	0	1		+		34014	9716	16775	16849	39668	39668					0.16022336193429965
TKLKVLSLK	9	Unmodified	_TKLKVLSLK_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1029.709521472454	1	1029.70304	1028.69577	2.4999	0.0025742	3.5025	0.0036065	6.0025	0.0061808	1029.7063076734717	108.14	0.11053	108.3	108.25	108.36	0.15781					22	10	3	0	0	0	0.85068	1	46672	46672		0.45834	0	1	94064000			34015	4958	16776	16850	39669	39669					0.18256642821893365
TKLKVLSLK	9	Unmodified	_TKLKVLSLK_					0	0	0		ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	ENSG00000196664|ENST00000380659|TLR7	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1029.70304	1028.69577	3.7428	0.003854	2.2921	0.0023602	6.0349	0.0062142	1029.7047568755338	108.12	0.10364	108.28	108.23	108.33	0.15796	-0.0097909	-0.0006052	NaN	0.45834	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	76307000			34016	4958	16776	16850							0.18256642821893365
TKLTIKKTL	9	Unmodified	_TKLTIKKTL_					0	0	0			REV__ENST00000485500.1_1_3:49065635-49065977:-|nuORF	REV__ENST00000485500.1_1_3:49065635-49065977:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.2367736697197	3	349.237504	1044.69068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.91	1	110.91	110.41	111.41	0								0	0	0	0.42693	1	47990	47990		0	0	1		+		34017	11235	16777	16851	39670	39670					0.17012338959261797
TKMAVLKA	8	Unmodified	_TKMAVLKA_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	431.2649719119072	2	431.264956	860.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.15	1	103.32	102.82	103.82	0.16445								0	0	0	1.0178	1	43460	43460		2.3027	0	1				34018	1021	16778	16852	39671	39671					0.07952220893378126
TKMAVLKA	8	Unmodified	_TKMAVLKA_					0	0	0		ENSG00000081479|ENST00000649046|LRP2;LRP2|p.I2300Sfs*31|1|0.04|ENSG00000081479|chr2:169206821-169206822|-/C|frameshift_variant	ENSG00000081479|ENST00000649046|LRP2	ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	431.2653076052666	2	431.264956	860.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.1	1	103.29	102.79	103.79	0.18066								0	0	0	1.0178	1	43391	43391		2.3027	0	1				34019	1021	16778	16852	39672	39672					0.07952220893378126
TKMKGLKYL	9	Unmodified	_TKMKGLKYL_					0	0	0			REV__ENST00000489476.5_1_2:73956300-73964431:-|nuORF;REV__ENSG00000144034|ENST00000272424|TPRKB	REV__ENSG00000144034|ENST00000272424|TPRKB	MSMS	GG20161007_CRH_Patient100_W632_02	4	361.2215148806572	3	361.219455	1080.63654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.48	1	104.65	104.15	105.15	0.1731								0	0	0	0.42693	1	44216	44216		0.96228	0	1		+		34020	13214;10233	16779	16853	39673	39673					0.09944423536057911
TKMKGLKYL	9	Unmodified	_TKMKGLKYL_					0	0	0			REV__ENST00000489476.5_1_2:73956300-73964431:-|nuORF;REV__ENSG00000144034|ENST00000272424|TPRKB	REV__ENSG00000144034|ENST00000272424|TPRKB	MSMS	GG20161007_CRH_Patient100_W632_02	4	361.2213928103447	3	361.219455	1080.63654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.64	1	104.81	104.31	105.31	0.1731								0	0	0	0.42693	1	44323	44323		0.96228	0	1		+		34021	13214;10233	16779	16853	39674	39674					0.09944423536057911
TKMLTLIS	8	Unmodified	_TKMLTLIS_					0	0	0		L1ME4a_dup12675|chr6:37045387-37045843:+|1.4283673080813548|0.2832341124959364|2.33|429.0|6|1|sense	L1ME4a_dup12675|chr6:37045387-37045843:+|1.4283673080813548|0.2832341124959364|2.33|429.0|6|1|sense	L1ME4a_dup12675|chr6:37045387-37045843:+|1.4283673080813548|0.2832341124959364|2.33|429.0|6|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	906.5316650271416	1	906.532866	905.52559	2.8215	0.0025578	-2.3514	-0.0021316	0.47009	0.00042615	906.5291387281657	106.95	0.11287	107.11	107.03	107.14	0.15781					9	4	3	0	0	0	0.89051	1	45904	45904		2.3027	0	1	23171000			34022	7712	16780	16854	39675	39675					0.06904783827963001
TKNGSGGG	8	Unmodified	_TKNGSGGG_					0	0	0			REV__ENSG00000265354|ENST00000580018|TIMM23	REV__ENSG00000265354|ENST00000580018|TIMM23	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	339.2713500857353	2	339.164285	676.314017	-2.0824	-0.00070628	2.6551	0.00090052	0.57269	0.00019424	339.16538858674045	108.59	0.10928	108.59	108.51	108.62	0					7	4	2	0	0	0	2.3239	1	46778	46778		0	0	1	5966000	+		34023	11995	16781	16855	39676	39676					-0.03708751818749079
TKPAGKDL	8	Unmodified	_TKPAGKDL_					0	0	0		nc|ENSG00000111859|Q14511-3|NEDD9;ENSG00000111859|ENST00000379446|NEDD9	nc|ENSG00000111859|Q14511-3|NEDD9	nc|ENSG00000111859|Q14511-3|NEDD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2408935427666	2	415.242535	828.470518	1.4902	0.00061878	-3.2326	-0.0013423	-1.7425	-0.00072354	415.241074279596	70.012	0.40742	70.334	70.066	70.474	0.32224					36	12	4	0	0	0	0.8873	1	29259	29259		4.3292	0	1	10279000			34024	1758	16782	16856	39677	39677					0.04942113351694388
TKPAPVRPR	9	Unmodified	_TKPAPVRPR_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.3164550662041	2	511.3169	1020.61925	3.4686	0.0017735	-2.5798	-0.0013191	0.88881	0.00045447	511.3150875535462	106.07	0.1241	106.23	106.16	106.28	0.15781					15	6	3	0	0	0	0.72823	1	45338	45338		6.2058	0	1	37591000	+		34025	9068	16783	16857	39678	39678					0.10976264045280004
TKPAPVRPR	9	Unmodified	_TKPAPVRPR_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.3169	1020.61925	1.4583	0.00074567	-0.28578	-0.00014612	1.1725	0.00059954	511.3163318791415	106.15	0.097878	106.15	106.09	106.19	0	-0.029084	0.0019274	NaN	6.2058	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6048400	+		34026	9068	16783	16857							0.10976264045280004
TKPAPVRPR	9	Unmodified	_TKPAPVRPR_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	511.3169	1020.61925	2.9044	0.0014851	-1.6719	-0.00085489	1.2324	0.00063017	511.31573873339636	106.1	0.081779	106.15	106.1	106.19	0.05455	-0.030458	0.00050987	NaN	6.2058	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6021100	+		34027	9068	16783	16857							0.10976264045280004
TKPAPVRPR	9	Unmodified	_TKPAPVRPR_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	511.3169	1020.61925	3.4686	0.0017735	-2.5798	-0.0013191	0.88881	0.00045447	511.3150875535462	106.07	0.1241	106.23	106.16	106.28	0.15781	0.044687	-0.00041848	NaN	6.2058	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37591000	+		34028	9068	16783	16857							0.10976264045280004
TKPAPVRPR	9	Unmodified	_TKPAPVRPR_					0	0	0			REV__ENSG00000102313|ENST00000218436|ITIH6	REV__ENSG00000102313|ENST00000218436|ITIH6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	511.3169	1020.61925	3.6059	0.0018438	-2.7451	-0.0014036	0.86083	0.00044016	511.31505536788734	106.03	0.14325	106.2	106.13	106.27	0.16174	0.014854	-0.00058753	NaN	6.2058	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32835000	+		34029	9068	16783	16857							0.10976264045280004
TKPFINPLP	9	Unmodified	_TKPFINPLP_					0	0	0		DENND2A|p.P662Sfs*2|1|0.09|ENSG00000146966|chr7:140555690-140555691|-/C|frameshift_variant;nc|ENSG00000146966|Q9ULE3-2|DENND2A;DENND2A|p.L884Sfs*29|1|0.23|ENSG00000146966|chr7:140523322-140523323|-/AAGTGATCTGCCCACCTCGGCCTCCCAAAGTGCT|frameshift_variant;ENSG00000146966|ENST00000496613|DENND2A	DENND2A|p.P662Sfs*2|1|0.09|ENSG00000146966|chr7:140555690-140555691|-/C|frameshift_variant	DENND2A|p.P662Sfs*2|1|0.09|ENSG00000146966|chr7:140555690-140555691|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.8079101443291	2	513.80276	1025.59097	2.204	0.0011324	3.1654	0.0016264	5.3694	0.0027588	513.804450563063	81.37	0.48544	81.661	81.4	81.885	0.29056					43	15	4	0	0	0	0.79362	1	33947	33947		3.5965	1.5367	1	17184000			34030	403	16784	16858	39679	39679					0.07919521345297653
TKPFQLYL	8	Unmodified	_TKPFQLYL_					0	0	0		nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	nc|ENSG00000048828|Q9NZB2-6|FAM120A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.2927123904228	2	505.289485	1008.56442	2.8313	0.0014306	3.2293	0.0016317	6.0605	0.0030623	505.29115535091995	80.494	0.36771	81.745	81.544	81.912	1.2512					31	11	3	0	0	0	0.88055	1	33809	33809		8.5933	0.68312	1	6534500			34031	7820	16785	16859	39680	39680					0.06047832453975843
TKPGKERRTLP	11	Unmodified	_TKPGKERRTLP_					0	0	0		ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8828613162041	2	641.883136	1281.75172	2.3142	0.0014855	-2.0607	-0.0013227	0.25357	0.00016276	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	1.0214	1	34039	34039		2.4985	1.0166	1	10103000			34032	5556	16786	16860	39681	39681					0.12211243991418996
TKPGKERRTLP	11	Unmodified	_TKPGKERRTLP_					0	0	0		ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8824951052666	2	641.883136	1281.75172	1.9822	0.0012723	-1.3106	-0.00084126	0.67155	0.00043106	641.8820510835203	81.341	2.8576	81.632	80.778	83.635	0.29056					269	92	4	0	0	0	1.0214	2	34008	34008;34114		2.4985	1.0166	1	11140000			34033	5556	16786	16860	39682;39683	39682					0.12211243991418996
TKPGKERRTLP	11	Unmodified	_TKPGKERRTLP_					0	0	0		ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	ENST00000234091.8_1_2:8819035-8819278:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8828613162041	2	641.883136	1281.75172	1.4587	0.0009363	-0.25961	-0.00016664	1.1991	0.00076966	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0214	1	33690	33690		2.4985	1.0166	1	9116700			34034	5556	16786	16860	39684	39684					0.12211243991418996
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.3147765994072	2	478.312961	954.611368	1.5511	0.00074191	1.5238	0.00072885	3.0749	0.0014708	478.3137192507663	106.16	0.17503	106.16	106.07	106.25	0					28	8	5	0	0	0	0.83753	1	45218	45218		1.8442	0	1	256590000	+		34035	14311	16787	16861	39685	39685					0.13224692005144334
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.3147155642509	2	478.312961	954.611368	1.5499	0.00074135	1.1676	0.00055849	2.7175	0.0012998	478.31349744888826	107.69	0.23924	107.69	107.58	107.82	0					56	12	6	0	0	0	0.83753	1	46195	46195		1.8442	0	1	993310000	+		34036	14311	16787	16861	39686	39686					0.13224692005144334
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	478.312961	954.611368	1.5499	0.00074135	1.1676	0.00055849	2.7175	0.0012998	478.31349744888826	107.69	0.23924	107.69	107.58	107.82	0	0.0046263	0.0016226	NaN	1.8442	56	12	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	993310000	+		34037	14311	16787	16861							0.13224692005144334
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	478.312961	954.611368	3.5503	0.0016981	-0.99853	-0.00047761	2.5517	0.0012205	478.3124447597302	107.69	0.29393	107.74	107.6	107.89	0.052444	0.05405	-0.00044961	NaN	1.8442	63	15	7	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830590000	+		34038	14311	16787	16861							0.13224692005144334
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	478.312961	954.611368	3.2661	0.0015622	-0.60953	-0.00029154	2.6565	0.0012707	478.31284619259037	107.66	0.25531	107.82	107.68	107.93	0.15781	0.12712	-7.7475E-05	NaN	1.8442	56	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9410900000	+		34039	14311	16787	16861							0.13224692005144334
TKPILIISA	9	Unmodified	_TKPILIISA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	478.312961	954.611368	3.2611	0.0015598	-2.3587	-0.0011282	0.90244	0.00043165	478.3125214690854	107.35	0.24905	107.5	107.41	107.66	0.15796	-0.1858	-0.0017508	NaN	1.8442	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2766800	+		34040	14311	16787	16861							0.13224692005144334
TKPKLAPL	8	Unmodified	_TKPKLAPL_					0	0	0		ENST00000495864.5_1_3:45874526-45875807:-|nuORF;ENST00000480156.5_1_3:45874526-45883504:-|nuORF;nc|ENSG00000163818|Q9NQ48-3|LZTFL1;nc|ENSG00000163818|Q9NQ48-2|LZTFL1;ENSG00000163818|ENST00000296135|LZTFL1	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2883788943291	2	434.286746	866.558939	3.3072	0.0014363	-0.76997	-0.00033439	2.5372	0.0011019	434.28662504920493	107.75	0.28011	107.91	107.77	108.05	0.15781					62	15	6	0	0	0	0.89051	1	46375	46375		2.3027	0	1	14075000000			34041	3726	16788	16862	39687	39687					0.12032153662153178
TKPKLAPL	8	Unmodified	_TKPKLAPL_					0	0	0		ENST00000495864.5_1_3:45874526-45875807:-|nuORF;ENST00000480156.5_1_3:45874526-45883504:-|nuORF;nc|ENSG00000163818|Q9NQ48-3|LZTFL1;nc|ENSG00000163818|Q9NQ48-2|LZTFL1;ENSG00000163818|ENST00000296135|LZTFL1	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	ENST00000495864.5_1_3:45874526-45875807:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2876464724541	2	434.286746	866.558939	3.3158	0.00144	-0.75181	-0.0003265	2.564	0.0011135	434.2864365637799	106.14	0.37048	106.3	106.07	106.44	0.16174					47	19	5	0	0	0	0.89051	1	45295	45295		2.3027	0	1	519590000			34042	3726	16788	16862	39688	39688					0.12032153662153178
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.8145629763603	2	464.813128	927.611703	3.428	0.0015934	-0.40128	-0.00018652	3.0267	0.0014069	464.8128806841929	106.14	0.18113	106.2	106.12	106.31	0.05455					24	8	4	0	0	0	0.89051	1	45153	45153		2.3027	0	1	127670000			34043	16271	16789	16863	39689	39689					0.1450011172498762
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8146545290947	2	464.813128	927.611703	3.3603	0.0015619	-1.8879	-0.00087754	1.4724	0.00068438	464.8128693522678	105.97	0.081795	106.13	106.08	106.16	0.15859					6	3	2	0	0	0	0.89051	1	45272	45272		2.3027	0	1	15684000			34044	16271	16789	16863	39690	39690					0.1450011172498762
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8142272830009	2	464.813128	927.611703	3.3609	0.0015622	-1.3509	-0.00062789	2.0101	0.0009343	464.81258299780774	108.32	0.49535	108.48	108.37	108.87	0.15781					49	25	3	0	0	0	0.89051	1	46806	46806		2.3027	0	1	31744000			34045	16271	16789	16863	39691	39691					0.1450011172498762
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.8149597048759	2	464.813128	927.611703	3.5434	0.001647	-1.6964	-0.00078851	1.847	0.0008585	464.8132404688099	105.96	0.081306	106.12	106.07	106.15	0.16679					6	3	2	0	0	0	0.89051	1	45194	45194		2.3027	0	1	14923000			34046	16271	16789	16863	39692	39692					0.1450011172498762
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.8141357302666	2	464.813128	927.611703	3.5454	0.001648	-1.3153	-0.00061137	2.2301	0.0010366	464.8124733986848	106.1	0.19527	106.26	106.17	106.36	0.16174					38	10	5	0	0	0	0.89051	1	45340	45340		2.3027	0	1	875610000			34047	16271	16789	16863	39693	39693					0.1450011172498762
TKPKTLKI	8	Unmodified	_TKPKTLKI_					0	0	0		tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	tr|A0A553SK59|A0A553SK59_NIACI3-isopropylmalatedehydrataselargesubunitOS=NialliacirculansOX=1397GN=leuCPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	464.813128	927.611703	3.5404	0.0016456	1.1621	0.00054018	4.7025	0.0021858	464.8124143302181	108.68	0.25784	108.83	108.74	108.99	0.1548	0.17525	0.0020417	NaN	2.3027	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2532100			34048	16271	16789	16863							0.1450011172498762
TKPKTTAI	8	Unmodified	_TKPKTTAI_					0	0	0		nc|ENSG00000164741|Q96QB1-5|DLC1;nc|ENSG00000164741|Q96QB1-3|DLC1;DLC1|p.S610Qfs*10|1|0.09|ENSG00000164741|chr8:13100509-13100510|-/G|frameshift_variant;ENSG00000164741|ENST00000276297|DLC1	nc|ENSG00000164741|Q96QB1-5|DLC1	nc|ENSG00000164741|Q96QB1-5|DLC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2659484744072	2	430.26601	858.517468	2.0761	0.00089328	-2.0185	-0.00086848	0.057641	2.4801E-05	430.26512130102367	71.672	0.6675	71.996	71.751	72.418	0.32359					54	20	4	0	0	0	0.89051	1	29967	29967		2.3027	0	1	14577000			34049	410	16790	16864	39694	39694					0.08254972902830104
TKPKVPLPRI	10	Unmodified	_TKPKVPLPRI_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8811523318291	2	574.879333	1147.74411	2.638	0.0015165	-0.8709	-0.00050066	1.7671	0.0010159	574.8787227327041	106.02	0.16525	106.07	105.98	106.15	0.05455					20	7	4	0	0	0	0.89803	1	45063	45063		1.4819	0	1	133650000	+		34050	11402	16791	16865	39695	39695					0.17615136461790826
TKPKVPLPRI	10	Unmodified	_TKPKVPLPRI_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8812133669853	2	574.879333	1147.74411	2.6378	0.0015164	-0.75028	-0.00043132	1.8875	0.0010851	574.8789192256838	107.5	0.1999	107.55	107.44	107.64	0.052444					27	9	4	0	0	0	0.89803	1	45965	45965		1.4819	0.15237	1	104760000	+		34051	11402	16791	16865	39696	39696					0.17615136461790826
TKPKVPLPRI	10	Unmodified	_TKPKVPLPRI_					0	0	0			REV__ENSG00000183763|ENST00000331456|TRAIP	REV__ENSG00000183763|ENST00000331456|TRAIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8802368044853	2	574.879333	1147.74411	3.2637	0.0018762	-2.9668	-0.0017056	0.29683	0.00017064	574.8775192189624	105.96	0.19334	106.12	106.03	106.23	0.16679					31	9	5	0	0	0	0.89803	1	45174	45174		1.4819	0.68827	1	729820000	+		34052	11402	16791	16865	39697	39697					0.17615136461790826
TKPLGALTS	9	Unmodified	_TKPLGALTS_					0	0	0		ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	444.2632324099541	2	444.263468	886.512382	3.3742	0.001499	-3.7317	-0.0016578	-0.3575	-0.00015882	444.26221465304684	107.6	0.16798	107.76	107.66	107.83	0.15795					18	8	3	0	0	0	0.7849	1	46272	46272		3.9444	1.6417	1	45218000			34053	6462	16792	16866	39698	39698					0.06458669040239329
TKPLGALTS	9	Unmodified	_TKPLGALTS_					0	0	0		ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	444.263468	886.512382	3.2404	0.0014396	-1.4035	-0.00062353	1.8369	0.00081608	444.2631502737878	107.65	0.11204	107.7	107.62	107.73	0.052452	-0.04299	0.0008868	NaN	3.9444	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5280100			34054	6462	16792	16866							0.06458669040239329
TKPLGALTS	9	Unmodified	_TKPLGALTS_					0	0	0		ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	ENST00000424989.1_1_1:37920801-37921029:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	444.263468	886.512382	3.372	0.001498	-1.9378	-0.00086089	1.4342	0.00063716	444.26321218095234	107.62	0.16583	107.77	107.68	107.84	0.15781	0.028168	0.00041208	NaN	3.9444	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41162000			34055	6462	16792	16866							0.06458669040239329
TKPLKKVII	9	Unmodified	_TKPLKKVII_					0	0	0		nc|ENSG00000005175|Q9H6T3-3|RPAP3;ENSG00000005175|ENST00000005386|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2438842654228	3	347.24611	1038.7165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.6	1	100.6	100.1	101.1	0								0	0	0	0.42693	1	42112	42112		0.96228	0	1				34056	482	16793	16867	39699	39699					0.1986923320155256
TKPLKKVIIEE	11	Unmodified	_TKPLKKVIIEE_					0	0	0		nc|ENSG00000005175|Q9H6T3-3|RPAP3;ENSG00000005175|ENST00000005386|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	nc|ENSG00000005175|Q9H6T3-3|RPAP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	649.4074584841728	2	649.408121	1296.80169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.799	1	99.799	99.299	100.3	0								0	0	0	0.63775	1	41775	41775		1.1933	0	1				34057	482	16794	16868	39700	39700					0.1651593387673529
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	634.8943359255791	2	634.891909	1267.76927	2.0951	0.0013302	1.6321	0.0010362	3.7272	0.0023664	634.8928293091928	94.41	0.49126	94.41	94.149	94.641	0					61	15	5	0	0	0	0.8974	1	39432	39432		1.4819	0	1	28943000			34058	6701	16795	16869	39701	39701					0.14609191264366927
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.5986511111259	3	423.597032	1267.76927	2.9923	0.0012675	1.4065	0.00059577	4.3988	0.0018633	423.5975609144342	94.261	0.56697	94.406	94.133	94.7	0.14494					63	17	5	0	0	0	0.8974	3	39425	39425;39464;39504		1.7423	0.52744	1	24397000			34059	6701	16795	16869	39702;39703;39704	39702					0.14609191264366927
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.5989562869072	3	423.597032	1267.76927	3.27	0.0013852	1.4377	0.00060899	4.7077	0.0019942	423.59755158570863	93.254	0.59981	94.531	94.228	94.828	1.277					60	18	5	0	0	0	0.8974	2	39231	39231;39267		1.7423	0.52744	1	13168000			34060	6701	16795	16869	39705;39706	39705					0.14609191264366927
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	634.891909	1267.76927	2.0951	0.0013302	1.6321	0.0010362	3.7272	0.0023664	634.8928293091928	94.41	0.49126	94.41	94.149	94.641	0	-0.042928	-0.00031459	NaN	1.4819	61	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28943000			34061	6701	16795	16869							0.14609191264366927
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	634.891909	1267.76927	2.5937	0.0016467	2.1725	0.0013793	4.7662	0.003026	634.893122609994	94.257	0.50206	94.402	94.165	94.667	0.14493	-0.050026	0.00037157	NaN	1.4819	62	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18758000			34062	6701	16795	16869							0.14609191264366927
TKPLLWVLLW	10	Unmodified	_TKPLLWVLLW_					0	0	0		ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	ENST00000465984.5_1_2:219247091-219251606:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	634.891909	1267.76927	3.8498	0.0024442	1.4353	0.00091125	5.2851	0.0033555	634.8925449914914	93.595	0.47889	94.467	94.226	94.705	0.87176	0.014825	-0.00056451	NaN	1.4819	46	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10314000			34063	6701	16795	16869							0.14609191264366927
TKPNTRQQLRR	11	Unmodified	_TKPNTRQQLRR_					0	0	0			REV__ENST00000460594.5_1_1:6714320-6761860:-|nuORF	REV__ENST00000460594.5_1_1:6714320-6761860:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	699.9131347537041	2	699.40784	1396.80113	2.5356	0.0017734	0.63864	0.00044667	3.1742	0.0022201	699.4080920657195	87.117	1.2908	87.36	87.195	88.486	0.24387					86	43	3	0	0	0	1.037	1	36640	36640		1.0715	0.61312	1	3164400	+		34064	13188	16796	16870	39707	39707					0.11859952000190788
TKPPIQALKKL	11	Unmodified	_TKPPIQALKKL_					0	0	0			REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	618.9064208865166	2	618.905548	1235.79654	1.5455	0.00095651	-0.65318	-0.00040426	0.89231	0.00055225	618.9047220054439	107.44	0.1989	107.44	107.35	107.55	0					27	9	4	0	0	0	1.0366	1	46036	46036		1.1933	0.12188	1	34080000	+		34065	8736	16797	16871	39708	39708					0.18807674804747876
TKPPIQALKKL	11	Unmodified	_TKPPIQALKKL_					0	0	0			REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	REV__nc|ENSG00000072415|Q8N3R9-2|PALS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.9064208865166	2	618.905548	1235.79654	2.9334	0.0018155	-1.666	-0.0010311	1.2674	0.00078441	618.9042524589477	107.36	0.1907	107.52	107.43	107.62	0.15796					27	9	3	0	0	0	1.0366	1	46086	46086		1.1933	0.66858	1	252530000	+		34066	8736	16797	16871	39709	39709					0.18807674804747876
TKPPRPKPA	9	Unmodified	_TKPPRPKPA_					0	0	0		ENSG00000088782|ENST00000382388|DEFB127	ENSG00000088782|ENST00000382388|DEFB127	ENSG00000088782|ENST00000382388|DEFB127	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3056213259697	2	496.306001	990.597449	1.5841	0.00078618	-3.5967	-0.0017851	-2.0127	-0.00099889	496.30440915894667	64.49	1.812	64.49	63.832	65.644	0					73	56	2	0	0	0	0.84195	1	26977	26977		1.6526	0	1	794100			34067	1107	16798	16872	39710	39710					0.1017745929668763
TKPRAGRG	8	Unmodified	_TKPRAGRG_					0	0	0		nc|ENSG00000196867|Q8NHY6-2|ZFP28;ENSG00000196867|ENST00000301318|ZFP28	nc|ENSG00000196867|Q8NHY6-2|ZFP28	nc|ENSG00000196867|Q8NHY6-2|ZFP28	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7520324587822	2	421.751393	841.488233	1.5474	0.00065261	-0.62271	-0.00026263	0.92466	0.00038998	421.75102016023567	70.474	0.5493	72.312	72.041	72.591	1.8378					41	17	3	0	0	0	0.89051	1	29518	29518		2.3027	0	1	10593000			34068	4966	16799	16873	39711	39711					0.061148733972345326
TKPSRSITVLT	11	Unmodified	_TKPSRSITVLT_					0	0	0		nc|ENSG00000151490|Q16827-5|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.8600341677666	2	601.858795	1201.70304	2.5963	0.0015626	-0.89448	-0.00053835	1.7018	0.0010242	601.8582541012362	90.482	0.39563	90.482	90.256	90.651	0					31	12	3	0	0	0	1.0214	1	37824	37824		2.4985	0	1	3217500			34069	3291	16800	16874	39712	39712					0.11025330631628094
TKPSRSITVLT	11	Unmodified	_TKPSRSITVLT_					0	0	0		nc|ENSG00000151490|Q16827-5|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	601.8605834841728	2	601.858795	1201.70304	2.527	0.0015209	-0.27835	-0.00016753	2.2487	0.0013534	601.8582887486766	90.331	0.3677	90.541	90.372	90.74	0.20904					21	11	2	0	0	0	0.98155	1	37862	37862		4.897	1.9018	1	2349300			34070	3291	16800	16874	39713	39713					0.11025330631628094
TKPSRSITVLT	11	Unmodified	_TKPSRSITVLT_					0	0	0		nc|ENSG00000151490|Q16827-5|PTPRO;nc|ENSG00000151490|Q16827-2|PTPRO;ENSG00000151490|ENST00000281171|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	nc|ENSG00000151490|Q16827-5|PTPRO	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	601.858795	1201.70304	5.112	0.0030767	-1.7102	-0.0010293	3.4019	0.0020474	601.8577209552213	89.654	0.33846	90.674	90.461	90.8	1.0199	0.10829	-0.00086384	NaN	4.897	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1449200			34071	3291	16800	16874							0.11025330631628094
TKPVRQVR	8	Unmodified	_TKPVRQVR_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	493.0162841677666	2	492.309075	982.603597	3.1796	0.0015653	2.0586	0.0010135	5.2381	0.0025788	492.3102037391751	109	0.20057	109.16	109.05	109.25	0.15898					17	9	2	0	0	0	2.3239	1	47182	47182		2.3027	0	1	28586000	+		34072	9349	16801	16875	39714	39714					0.11159977528222953
TKQHRRLLKLR	11	Unmodified	_TKQHRRLLKLR_					0	0	0			REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.9874450564384	4	362.987572	1447.92118	-1.1592	-0.00042077	0.018444	6.6949E-06	-1.1407	-0.00041408	362.98878957259956	33.703	1.7093	33.703	33.328	35.037	0					248	55	7	0	0	0	1.0388	1	14414	14414		0.50596	0.051438	1	399160000	+		34073	9829	16802	16876	39715	39715					0.2151398506462101
TKQHRRLLKLR	11	Unmodified	_TKQHRRLLKLR_					0	0	0			REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	REV__nc|ENSG00000131848|Q9BUG6-2|ZSCAN5A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.9874755740166	4	362.987572	1447.92118	0.47661	0.000173	-2.3703	-0.00086039	-1.8937	-0.00068739	362.9877963273164	30.842	1.2035	32.657	32.231	33.435	1.8151					129	40	6	0	0	0	1.0388	2	12906	12906;12955		0.50596	0.09769	1	538960000	+		34074	9829	16802	16876	39716;39717	39716					0.2151398506462101
TKRDKKNL	8	Unmodified	_TKRDKKNL_					0	0	0			REV__nc|ENSG00000021355|P30740-2|SERPINB1	REV__nc|ENSG00000021355|P30740-2|SERPINB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.8075439333916	2	501.806365	1001.59818	3.2064	0.001609	-2.1764	-0.0010921	1.03	0.00051685	501.80634667286677	93.223	0.35696	93.391	93.19	93.547	0.16835					18	10	2	0	0	0	0.89178	1	39067	39067		0.69038	0	1	381970	+		34075	8556	16803	16877	39718	39718					0.09744253945746095
TKRPQTLLQH	10	Unmodified	_TKRPQTLLQH_					0	0	0			REV__ENSG00000131126|ENST00000598265|TEX101	REV__ENSG00000131126|ENST00000598265|TEX101	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3566161990166	2	611.356754	1220.69895	2.1011	0.0012845	-1.2028	-0.00073536	0.89824	0.00054914	611.355711627359	79.564	2.8445	79.564	78.535	81.38	0					187	91	4	0	0	0	0.89803	1	33264	33264		1.4819	0.15237	1	6519600	+		34076	9814	16804	16878	39719	39719					0.09743285928607293
TKRPQTLLQH	10	Unmodified	_TKRPQTLLQH_					0	0	0			REV__ENSG00000131126|ENST00000598265|TEX101	REV__ENSG00000131126|ENST00000598265|TEX101	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3577758669853	2	611.356754	1220.69895	1.6593	0.0010144	-0.21707	-0.00013271	1.4423	0.00088174	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.89803	1	33349	33349		1.4819	0.15237	1	10904000	+		34077	9814	16804	16878	39720	39720					0.09743285928607293
TKRPQTLLQH	10	Unmodified	_TKRPQTLLQH_					0	0	0			REV__ENSG00000131126|ENST00000598265|TEX101	REV__ENSG00000131126|ENST00000598265|TEX101	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3575317263603	2	611.356754	1220.69895	1.8236	0.0011148	-0.11816	-7.2239E-05	1.7054	0.0010426	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.89803	2	32934	32934;33053		1.4819	0.15237	1	5176900	+		34078	9814	16804	16878	39721;39722	39721					0.09743285928607293
TKRQHKRK	8	Unmodified	_TKRQHKRK_					0	0	0		ENST00000269214.9_1_18:19155190-19155674:-|nuORF	ENST00000269214.9_1_18:19155190-19155674:-|nuORF	ENST00000269214.9_1_18:19155190-19155674:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3388549685478	2	541.338698	1080.66284	1.7852	0.00096641	-0.79659	-0.00043123	0.98864	0.00053519	541.3381543684688	80.993	1.0405	80.993	80.572	81.613	0					56	33	3	0	0	0	0.89178	1	33824	33824		0.69038	0.16561	1	2232100			34079	5668	16805	16879	39723	39723					0.12573873542419278
TKRRIGGLLL	10	Unmodified	_TKRRIGGLLL_					0	0	0			REV__ENST00000571688.5_2_16:11643218-11643479:-|nuORF	REV__ENST00000571688.5_2_16:11643218-11643479:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	563.8748046755791	2	563.874582	1125.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.13984	1	0.87563	0.37563	1.3756	0.73579								0	0	0	0.66264	1	57	57		0	0	1		+		34080	13967	16806	16880	39724	39724					0.17677368176305208
TKRRRKKKVMV	11	Unmodified	_TKRRRKKKVMV_					0	0	0		chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	477.3169738650322	3	477.313523	1428.91874	3.3133	0.0015815	2.4517	0.0011702	5.765	0.0027517	477.3151795788744	105.78	0.13092	105.94	105.88	106.01	0.16679					16	6	3	0	0	0	1.0391	1	45086	45086		0.40827	0.31342	1	38208000			34081	240	16807	16881	39725	39725					0.2214381333531037
TKRRRKKKVMV	11	Unmodified	_TKRRRKKKVMV_					0	0	0		chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	477.313523	1428.91874	1.6043	0.00076574	6.0221	0.0028744	7.6264	0.0036402	477.3164419070044	105.87	0.079071	105.87	105.81	105.89	0	-0.04424	0.0033801	NaN	0.40827	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3134000			34082	240	16807	16881							0.2214381333531037
TKRRRKKKVMV	11	Unmodified	_TKRRRKKKVMV_					0	0	0		chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	chr2:231708751-231711960|199|62.68|0.05|10.2|+|0|PTMA,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	477.313523	1428.91874	3.5384	0.0016889	6.5336	0.0031186	10.072	0.0048075	477.3172710171791	105.83	0.12095	105.88	105.82	105.94	0.05455	-0.035811	0.0041125	NaN	0.40827	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3412600			34083	240	16807	16881							0.2214381333531037
TKRTKRKK	8	Unmodified	_TKRTKRKK_					0	0	0		ENST00000536038.5_1_17:79870294-79871084:-|nuORF;ENST00000574992.5_1_17:79870294-79870651:-|nuORF;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENSG00000187531|ENST00000328666|SIRT7	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	349.2374755740166	3	349.236608	1044.688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.3	1	111.34	110.84	111.84	0.047043								0	0	0	1.0178	1	47990	47990		0	0	1				34084	4825	16808	16882	39726	39726					0.1674392834495393
TKRTKRKK	8	Unmodified	_TKRTKRKK_					0	0	0		ENST00000536038.5_1_17:79870294-79871084:-|nuORF;ENST00000574992.5_1_17:79870294-79870651:-|nuORF;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENSG00000187531|ENST00000328666|SIRT7	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	349.2367431521416	3	349.236608	1044.688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.77	1	110.93	110.43	111.43	0.16133								0	0	0	1.0178	1	48095	48095		0	0	1				34085	4825	16808	16882	39727	39727					0.1674392834495393
TKRTKRKK	8	Unmodified	_TKRTKRKK_					0	0	0		ENST00000536038.5_1_17:79870294-79871084:-|nuORF;ENST00000574992.5_1_17:79870294-79870651:-|nuORF;ENST00000572976.5_1_17:79870294-79872532:-|nuORF;ENSG00000187531|ENST00000328666|SIRT7	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	ENST00000536038.5_1_17:79870294-79871084:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	349.2366515994072	3	349.236608	1044.688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.41	1	111.57	111.07	112.07	0.16445								0	0	0	1.0178	1	48351	48351		0	0	1				34086	4825	16808	16882	39728	39728					0.1674392834495393
TKSKKTEK	8	Unmodified	_TKSKKTEK_					0	0	0			REV__ENST00000367866.6_1_1:167385133-167385376:+|nuORF	REV__ENST00000367866.6_1_1:167385133-167385376:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	475.2870056033134	2	475.287474	948.560395	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.2	1	104.2	103.7	104.7	0								0	0	0	1.0178	1	43933	43933		2.3027	0	1		+		34087	12632	16809	16883	39729	39729					0.08405742960269436
TKTAAASLALS	11	Unmodified	_TKTAAASLALS_					0	0	0			REV__ENST00000231368.9_1_5:96271654-96271876:+|nuORF	REV__ENST00000231368.9_1_5:96271654-96271876:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.3003417849541	2	517.298039	1032.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.2	1	104.37	103.87	104.87	0.1731								0	0	0	0.63775	1	44031	44031		4.897	0.95262	1		+		34088	12102	16810	16884	39730	39730					0.06653708269118397
TKTEISEMNR	10	Unmodified	_TKTEISEMNR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	605.2521850466728	2	604.80062	1207.58669	-0.22243	-0.00013453	0.84268	0.00050965	0.62025	0.00037513	604.8016993651712	12.364	0.12577	13.058	12.98	13.106	0.69396					9	3	3	0	0	0	0.12375	1	5140	5140		22.775	10.534	1	974280		+	34089	343	16811	16885	39731	39731					-0.008803559305306408
TKTEISEMNR	10	Unmodified	_TKTEISEMNR_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__Q9H552;ENST00000409686.2_1_9:102067468-102068890:+|nuORF;ENST00000512037.2_1_4:103650201-103650651:-|nuORF	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	605.2529174685478	2	604.80062	1207.58669	0.12335	7.4603E-05	0.032987	1.9951E-05	0.15634	9.4554E-05	604.8006236472473	12.168	0.12695	12.956	12.876	13.003	0.78751					8	3	3	0	0	0	0.12348	1	5067	5067		24.882	10.476	1	1422100		+	34090	343	16811	16885	39732	39732					-0.008803559305306408
TKTKKKVI	8	Unmodified	_TKTKKKVI_					0	0	0		tr|A0A7D6ZFC4|A0A7D6ZFC4_9CLOTCobalttransportproteinCbiNOS=ClostridiumintestinaleOX=36845GN=cbiNPE=3SV=1	tr|A0A7D6ZFC4|A0A7D6ZFC4_9CLOTCobalttransportproteinCbiNOS=ClostridiumintestinaleOX=36845GN=cbiNPE=3SV=1	tr|A0A7D6ZFC4|A0A7D6ZFC4_9CLOTCobalttransportproteinCbiNOS=ClostridiumintestinaleOX=36845GN=cbiNPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3275024294853	2	473.326402	944.638252	3.3015	0.0015627	-0.58984	-0.00027919	2.7117	0.0012835	473.3260883800726	106.13	0.21612	106.29	106.19	106.41	0.15781					39	11	5	0	0	0	0.89176	1	45433	45433		0.79363	0.10326	1	940180000			34091	17060	16812	16886	39733	39733					0.16371800616320797
TKTKTKKRP	9	Unmodified	_TKTKTKKRP_					0	0	0		ENSG00000101608|ENST00000217652|MYL12A;ENST00000577510.5_1_18:3252320-3253446:+|nuORF;ENST00000580353.1_1_18:3247898-3253446:+|nuORF	ENSG00000101608|ENST00000217652|MYL12A	ENSG00000101608|ENST00000217652|MYL12A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3537475466728	2	544.35094	1086.68733	3.2477	0.0017679	1.4095	0.00076726	4.6572	0.0025352	544.3516665471458	107.51	0.23145	107.67	107.52	107.75	0.15795					50	11	6	0	0	0	0.85019	1	46164	46164		0.52476	0	1	1583199999.9999998			34092	1360	16813	16887	39734	39734					0.1474508890528341
TKTLIKTIV	9	Unmodified	_TKTLIKTIV_					0	0	0		ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1016.674060046673	1	1016.67141	1015.66413	1.2393	0.00126	0.62432	0.00063473	1.8637	0.0018947	1016.6720756221941	107.68	0.20641	107.68	107.55	107.75	0					35	10	5	0	0	0	0.84963	2	46176	46176;46244		0.6015	0	1	213460000			34093	4338	16814	16888	39735;39736	39735					0.15692650067956038
TKTLIKTIV	9	Unmodified	_TKTLIKTIV_					0	0	0		ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1016.674182116985	1	1016.67141	1015.66413	3.0771	0.0031284	-0.83582	-0.00084976	2.2413	0.0022786	1016.6704159315907	107.62	0.22569	107.67	107.56	107.79	0.052452					39	11	5	0	0	0	0.84963	1	46055	46055		0.6015	0	1	283000000			34094	4338	16814	16888	39737	39737					0.15692650067956038
TKTLIKTIV	9	Unmodified	_TKTLIKTIV_					0	0	0		ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.672045886517	1	1016.67141	1015.66413	2.538	0.0025803	-1.0462	-0.0010637	1.4917	0.0015166	1016.6701769518633	107.59	0.22151	107.74	107.64	107.86	0.15781					43	11	5	0	0	0	0.84963	1	46356	46356		0.6015	0	1	881770000			34095	4338	16814	16888	39738	39738					0.15692650067956038
TKTLIKTIV	9	Unmodified	_TKTLIKTIV_					0	0	0		ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	ENSG00000174697|ENST00000308868|LEP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1016.67141	1015.66413	1.2393	0.00126	0.62432	0.00063473	1.8637	0.0018947	1016.6720756221941	107.68	0.20641	107.68	107.55	107.75	0	-0.020128	0.0011229	NaN	0.6015	35	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	213460000			34096	4338	16814	16888							0.15692650067956038
TKTLRITT	8	Unmodified	_TKTLRITT_					0	0	0		ENST00000457473.1_1_9:75270895-75271066:-|nuORF;ENSG00000008988|ENST00000009589|RPS20;nc|ENSG00000008988|P60866-2|RPS20	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5757934451103	1	933.572757	932.565481	3.4314	0.0032034	-0.65586	-0.00061229	2.7755	0.0025911	933.5717021429236	107.71	0.19872	107.87	107.73	107.93	0.15781					31	10	4	0	0	0	0.89008	1	46364	46364		2.5775	0	1	426540000			34097	6648	16815	16889	39739	39739					0.09650046822878267
TKTLRITT	8	Unmodified	_TKTLRITT_					0	0	0		ENST00000457473.1_1_9:75270895-75271066:-|nuORF;ENSG00000008988|ENST00000009589|RPS20;nc|ENSG00000008988|P60866-2|RPS20	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	ENST00000457473.1_1_9:75270895-75271066:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	933.5765258669853	1	933.572757	932.565481	3.4412	0.0032127	-1.4444	-0.0013485	1.9968	0.0018642	933.5707884368765	107.68	0.18375	107.84	107.74	107.92	0.15795					29	9	4	0	0	0	0.89008	1	46300	46300		2.5775	0	1	509830000			34098	6648	16815	16889	39740	39740					0.09650046822878267
TKVAAAAAA	9	Unmodified	_TKVAAAAAA_					0	0	0			REV__ENST00000597403.5_1_19:47249325-47251827:+|nuORF	REV__ENST00000597403.5_1_19:47249325-47251827:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	773.5622436404228	1	773.451579	772.444303	2.5931	0.0020056	-2.7581	-0.0021333	-0.16508	-0.00012768	773.4521607468826	107.88	0.10707	108.04	107.99	108.1	0.15781					15	7	3	0	0	0	0.11957	1	46515	46515		0	0	1	54583000	+		34099	14100	16816	16890	39741	39741					0.048978441802091766
TKVKKKRMKRN	11	Unmodified	_TKVKKKRMKRN_					0	0	0		L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|61|3|sense	L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|61|3|sense	L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|61|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.9713928103447	3	472.969645	1415.88711	2.1816	0.0010318	1.2934	0.00061175	3.475	0.0016436	472.97020390575227	35.68	0.47717	35.979	35.831	36.308	0.29942					84	43	4	0	0	0	1.0402	1	14996	14996		0.094841	0	1	46105000			34100	7780	16817	16891	39742	39742					0.19579820581361673
TKWIHTLK	8	Unmodified	_TKWIHTLK_					0	0	0		ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8755370974541	3	342.874677	1025.6022	0.88883	0.00030476	2.1158	0.00072546	3.0046	0.0010302	342.8752769688571	33.988	0.5747	34.285	34.024	34.599	0.29701					65	18	5	0	0	0	0.88942	1	14355	14355		2.9952	1.151	1	9107400			34101	5956	16818	16892	39743	39743					0.0904234343945518
TKWIHTLK	8	Unmodified	_TKWIHTLK_					0	0	0		ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2094909548759	3	342.874677	1025.6022	-0.77355	-0.00026523	0.42581	0.000146	-0.34774	-0.00011923	342.8748353830219	33.619	0.25541	34.893	34.742	34.997	1.2746					38	24	2	0	0	0	0.8864	1	14060	14060		4.897	0.56777	1	21438000			34102	5956	16818	16892	39744	39744					0.0904234343945518
TKWIHTLK	8	Unmodified	_TKWIHTLK_					0	0	0		ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	ENST00000344138.8_1_22:40297169-40297247:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8752319216728	3	342.874677	1025.6022	0.35916	0.00012315	1.2656	0.00043395	1.6248	0.0005571	342.8749917234561	32.192	0.48498	34.016	33.818	34.303	1.8246					51	16	4	0	0	0	0.88942	1	13560	13560		2.9952	1.151	1	17134000			34103	5956	16818	16892	39745	39745					0.0904234343945518
TKWKLVYLTK	10	Unmodified	_TKWKLVYLTK_					0	0	0		ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2657348513603	3	427.263941	1278.76999	2.1191	0.00090541	1.5292	0.00065335	3.6483	0.0015588	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	0.89803	1	17924	17924		1.4551	0.12547	1	48247000			34104	6099	16819	16893	39746	39746					0.14175985913379918
TKWKLVYLTK	10	Unmodified	_TKWKLVYLTK_					0	0	0		ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7003051638603	4	320.699775	1278.76999	1.0696	0.00034303	1.764	0.00056572	2.8336	0.00090875	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	0.89803	3	16959	16959;17076;17115		1.4551	1.4551	1	367210000			34105	6099	16819	16893	39747;39748;39749	39747					0.14175985913379918
TKWKLVYLTK	10	Unmodified	_TKWKLVYLTK_					0	0	0		ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	ENST00000369722.7_1_1:112003654-112003708:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2651550173759	3	427.263941	1278.76999	2.3581	0.0010075	0.7852	0.00033549	3.1433	0.001343	427.2641553664048	40.681	0.4704	42.007	41.834	42.305	1.3254					51	14	4	0	0	0	0.89803	1	17077	17077		1.4551	0.12547	1	26825000			34106	6099	16819	16893	39750	39750					0.14175985913379918
TKYRRNQFWIK	11	Unmodified	_TKYRRNQFWIK_					0	0	0			REV__nc|ENSG00000167034|Q99801-3|NKX3-1	REV__nc|ENSG00000167034|Q99801-3|NKX3-1	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.9564697146416	3	513.956282	1538.84702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.908	1	44.908	44.408	45.408	0								0	0	0	0.63775	1	18794	18794		1.1098	0	1		+		34107	9279	16820	16894	39751	39751					0.09914597182455509
TLADIIARL	9	Unmodified	_TLADIIARL_					0	0	0		nc|ENSG00000205978|Q9P2P1-2|NYNRIN;ENSG00000205978|ENST00000382554|NYNRIN	nc|ENSG00000205978|Q9P2P1-2|NYNRIN	nc|ENSG00000205978|Q9P2P1-2|NYNRIN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.3065368533134	2	493.305667	984.596781	1.4981	0.00073902	0.20445	0.00010086	1.7025	0.00083988	493.3059486764677	79.719	0.93163	79.719	79.422	80.354	0					81	29	5	0	0	0	0.00026547	7	33157	33120;33157;33194;33233;33272;33312;33374		139.14	11.296	1	92773000			34108	5192	16821	16895	39752;39753;39754;39755;39756;39757;39758	39753					0.10386619857001733
TLADIIARL	9	Unmodified	_TLADIIARL_					0	0	0		nc|ENSG00000205978|Q9P2P1-2|NYNRIN;ENSG00000205978|ENST00000382554|NYNRIN	nc|ENSG00000205978|Q9P2P1-2|NYNRIN	nc|ENSG00000205978|Q9P2P1-2|NYNRIN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3056518435478	2	493.305667	984.596781	1.428	0.00070443	-1.3342	-0.00065819	0.093732	4.6239E-05	493.30534385194585	77.614	0.73618	79.366	79.073	79.809	1.7514					80	23	5	0	0	0	0.0022704	1	32589	32589		129.77	3.2064	1	344450000			34109	5192	16821	16895	39759	39759					0.10386619857001733
TLADLLALR	9	Unmodified	_TLADLLALR_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.3067199587822	2	493.305667	984.596781	2.3899	0.001179	-0.11811	-5.8266E-05	2.2718	0.0011207	493.3057637407517	79.118	1.0039	79.418	79.127	80.131	0.30047					88	31	5	0	0	0	0.0069529	5	33046	33046;33096;33135;33175;33218		114.65	0	1	88033000			34110	1545	16822	16896	39760;39761;39762;39763;39764	39760					0.10386619856990364
TLADLLALR	9	Unmodified	_TLADLLALR_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.3068725466728	2	493.305667	984.596781	2.5869	0.0012761	-0.58419	-0.00028819	2.0027	0.00098795	493.3060483719408	78.198	0.75524	79.465	79.031	79.787	1.2668					82	24	5	0	0	0	0.00026547	4	32799	32749;32799;32851;32903		139.14	0	1	311380000			34111	1545	16822	16896	39765;39766;39767;39768	39766					0.10386619856990364
TLADLLALR	9	Unmodified	_TLADLLALR_					0	0	0		ENSG00000105877|ENST00000409508|DNAH11;DNAH11|p.L1769Yfs*9|1|0.08|ENSG00000105877|chr7:21659007-21659008|-/TATGCAAGAAACGGTGCGTCATT|frameshift_variant	ENSG00000105877|ENST00000409508|DNAH11	ENSG00000105877|ENST00000409508|DNAH11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.3063842654228	2	493.305667	984.596781	1.428	0.00070443	-1.3342	-0.00065819	0.093732	4.6239E-05	493.30534385194585	77.614	0.73618	79.366	79.073	79.809	1.7514					80	23	5	0	0	0	0.00026547	4	32489	32489;32537;32628;32667		139.14	0	1	344450000			34112	1545	16822	16896	39769;39770;39771;39772	39769					0.10386619856990364
TLADLVHHV	9	Unmodified	_TLADLVHHV_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant;TRRAP|p.V815Afs*78|1|0.09|ENSG00000196367|chr7:98917500-98917501|-/CCTCCTCTATCCTCCTCATCCT|frameshift_variant;TRRAP|p.F1061Yfs*20|1|0.05|ENSG00000196367|chr7:98929994-98929995|-/A|frameshift_variant;TRRAP|p.G1086Afs*42|1|0.04|ENSG00000196367|chr7:98930067-98930068|-/GGCCACTTGTATTTGTTCACTTTTATTTCCGATCC|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7798644900322	2	502.779816	1003.54508	0.96555	0.00048546	0.15744	7.9156E-05	1.123	0.00056462	502.77971849339815	37.607	0.35163	38.891	38.761	39.113	1.284					28	13	3	0	0	0	0.031324	2	15796	15755;15796		85.357	57.728	1	5664400			34113	4935	16823	16897	39773;39774	39774					0.04344876163088429
TLADLVHHV	9	Unmodified	_TLADLVHHV_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant;TRRAP|p.V815Afs*78|1|0.09|ENSG00000196367|chr7:98917500-98917501|-/CCTCCTCTATCCTCCTCATCCT|frameshift_variant;TRRAP|p.F1061Yfs*20|1|0.05|ENSG00000196367|chr7:98929994-98929995|-/A|frameshift_variant;TRRAP|p.G1086Afs*42|1|0.04|ENSG00000196367|chr7:98930067-98930068|-/GGCCACTTGTATTTGTTCACTTTTATTTCCGATCC|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7800475955009	2	502.779816	1003.54508	0.51683	0.00025985	0.40054	0.00020138	0.91737	0.00046123	502.7798760691337	36.931	0.28057	38.748	38.642	38.923	1.8176					34	15	3	0	0	0	0.051699	2	15514	15465;15514		67.344	44.608	1	4352100			34114	4935	16823	16897	39775;39776	39776					0.04344876163088429
TLADLVHHV	9	Unmodified	_TLADLVHHV_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant;TRRAP|p.V815Afs*78|1|0.09|ENSG00000196367|chr7:98917500-98917501|-/CCTCCTCTATCCTCCTCATCCT|frameshift_variant;TRRAP|p.F1061Yfs*20|1|0.05|ENSG00000196367|chr7:98929994-98929995|-/A|frameshift_variant;TRRAP|p.G1086Afs*42|1|0.04|ENSG00000196367|chr7:98930067-98930068|-/GGCCACTTGTATTTGTTCACTTTTATTTCCGATCC|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	502.779816	1003.54508	2.097	0.0010543	2.3645	0.0011888	4.4615	0.0022431	502.78138547067505	38.949	0.33898	39.257	39.06	39.399	0.30857	0.29168	0.0015968	NaN	85.357	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1637100			34115	4935	16823	16897							0.04344876163088429
TLADVLYHV	9	Unmodified	_TLADVLYHV_					0	0	0		POLB-ASH2L|1|fusion;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L;ENSG00000129691|ENST00000343823|ASH2L	POLB-ASH2L|1|fusion	POLB-ASH2L|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.7834350466728	2	515.782025	1029.5495	2.3443	0.0012092	0.91237	0.00047058	3.2567	0.0016797	515.7823295270622	60.415	0.44233	60.415	60.227	60.669	0					30	13	3	0	0	0	0.076627	2	25232	25181;25232		57.471	30.588	1	3655800			34116	8060	16824	16898	39777;39778	39778					0.035903405860153725
TLADVLYHV	9	Unmodified	_TLADVLYHV_					0	0	0		POLB-ASH2L|1|fusion;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L;ENSG00000129691|ENST00000343823|ASH2L	POLB-ASH2L|1|fusion	POLB-ASH2L|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.7828246951103	2	515.782025	1029.5495	2.4723	0.0012752	-0.61677	-0.00031812	1.8555	0.00095704	515.7817031782527	59.821	0.38415	60.149	59.966	60.35	0.32809					30	12	3	0	0	0	0.051699	2	25092	25040;25092		67.344	25.504	1	3942400			34117	8060	16824	16898	39779;39780	39780					0.035903405860153725
TLADVLYHV	9	Unmodified	_TLADVLYHV_					0	0	0		POLB-ASH2L|1|fusion;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L;ENSG00000129691|ENST00000343823|ASH2L	POLB-ASH2L|1|fusion	POLB-ASH2L|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7841064333916	2	515.782025	1029.5495	1.6555	0.00085388	3.2796	0.0016915	4.9351	0.0025454	515.7835333277262	58.696	0.50731	60.114	59.752	60.26	1.4181					43	15	4	0	0	0	0.051699	3	24609	24564;24609;24654		67.344	27.387	1	10252000			34118	8060	16824	16898	39781;39782;39783	39782					0.035903405860153725
TLADVLYHV	9	Unmodified	_TLADVLYHV_					0	0	0		POLB-ASH2L|1|fusion;ENST00000520079.1_1_8:37996261-37996586:+|nuORF;nc|ENSG00000129691|Q9UBL3-2|ASH2L;nc|ENSG00000129691|Q9UBL3-3|ASH2L;ENSG00000129691|ENST00000343823|ASH2L	POLB-ASH2L|1|fusion	POLB-ASH2L|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7830688357353	2	515.782025	1029.5495	1.3461	0.00069427	2.9688	0.0015313	4.3149	0.0022255	515.7832234045414	58.097	0.96851	60.066	59.784	60.753	1.969					57	31	4	0	0	0	0.051699	3	24401	24356;24401;24447		67.344	31.217	1	13319000			34119	8060	16824	16898	39784;39785;39786	39785					0.035903405860153725
TLADYLHLL	9	Unmodified	_TLADYLHLL_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.7978393435478	2	529.797675	1057.5808	2.2322	0.0011826	-0.45538	-0.00024126	1.7769	0.00094138	529.7971625184554	82.63	0.36951	82.63	82.43	82.8	0					27	11	3	0	0	0	0.087207	2	34407	34407;34457		53.576	21.459	1	3540500			34120	2329	16825	16899	39787;39788	39787					0.054309136201027286
TLADYLHLL	9	Unmodified	_TLADYLHLL_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.7979003787041	2	529.797675	1057.5808	2.2954	0.0012161	-0.67742	-0.00035889	1.618	0.00085722	529.7969342477952	82.137	0.36986	82.417	82.244	82.613	0.2802					31	11	3	0	0	0	0.1735	1	34385	34385		36.044	17.909	1	2895500			34121	2329	16825	16899	39789	39789					0.054309136201027286
TLADYLHLL	9	Unmodified	_TLADYLHLL_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7992431521416	2	529.797675	1057.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.17	1	82.403	81.903	82.903	1.2332								0	0	0	0.043809	1	34077	34077		63.563	23.114	1				34122	2329	16825	16899	39790	39790					0.054309136201027286
TLADYLHLL	9	Unmodified	_TLADYLHLL_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7988769412041	2	529.797675	1057.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.296	1	82.529	82.029	83.029	1.2332								0	0	0	0.043809	1	34129	34129		63.563	23.114	1				34123	2329	16825	16899	39791	39791					0.054309136201027286
TLADYLHLL	9	Unmodified	_TLADYLHLL_					0	0	0		ENST00000471420.1_1_1:42922476-42938912:+|nuORF;ENST00000472013.1_1_1:42922230-42922863:+|nuORF;ENSG00000127125|ENST00000372561|PPCS	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	ENST00000471420.1_1_1:42922476-42938912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7993652224541	2	529.797675	1057.5808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.784	1	82.48	81.98	82.98	1.6959								0	0	0	0.026118	1	33892	33892		77.984	35.89	1				34124	2329	16825	16899	39792	39792					0.054309136201027286
TLAEIAKVEL	10	Unmodified	_TLAEIAKVEL_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.8241454958916	2	543.823889	1085.63323	1.6566	0.00090092	-1.609	-0.000875	0.047658	2.5917E-05	543.8236741004557	55.48	0.29115	55.48	55.312	55.603	0					25	10	3	0	0	0	0.067026	2	23090	23090;23141		71.708	33.532	1	3738000			34125	3172	16826	16900	39793;39794	39793					0.09383451963026346
TLAEIAKVEL	10	Unmodified	_TLAEIAKVEL_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8246337771416	2	543.823889	1085.63323	2.0194	0.0010982	-1.7155	-0.00093293	0.30388	0.00016526	543.8235869487839	54.908	0.37634	55.229	55.056	55.432	0.32088					27	12	3	0	0	0	0.055952	2	23018	22967;23018		91.085	43.49	1	3417200			34126	3172	16826	16900	39795;39796	39796					0.09383451963026346
TLAEIAKVEL	10	Unmodified	_TLAEIAKVEL_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8239623904228	2	543.823889	1085.63323	1.1117	0.00060459	-0.83151	-0.00045219	0.28023	0.00015239	543.8236797959056	53.692	0.41194	55.092	54.934	55.346	1.4005					36	15	3	0	0	0	0.046747	3	22426	22426;22466;22512		162.31	85.49	1	16597000			34127	3172	16826	16900	39797;39798;39799	39797					0.09383451963026346
TLAEIAKVEL	10	Unmodified	_TLAEIAKVEL_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8242675662041	2	543.823889	1085.63323	0.74143	0.00040321	-0.47989	-0.00026098	0.26154	0.00014223	543.8236584119154	53.167	0.37128	55.136	54.986	55.357	1.9697					37	16	3	0	0	0	0.067734	3	22234	22234;22276;22331		162.31	78.886	1	13678000			34128	3172	16826	16900	39800;39801;39802	39800					0.09383451963026346
TLAELLVLL	9	Unmodified	_TLAELLVLL_					0	0	0		ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	984.6365844607353	1	984.63396	983.626684	1.2411	0.001222	2.5236	0.0024848	3.7647	0.0037069	984.6356006171711	99.04	0.12051	99.04	98.99	99.111	0					9	3	4	0	0	0	0.022807	1	41448	41448		97.075	11.718	1	62272000			34129	1075	16827	16901	39803	39803					0.13421558802315303
TLAELLVLL	9	Unmodified	_TLAELLVLL_					0	0	0		ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.8216125369072	2	492.820618	983.626684	0.99457	0.00049014	2.8937	0.0014261	3.8883	0.0019162	492.8219715115436	99.064	0.08876	99.064	98.99	99.079	0					8	2	4	0	0	0	0.051699	1	41450	41450		67.344	6.9543	1	37152000			34130	1075	16827	16901	39804	39804					0.13421558802315303
TLAELLVLL	9	Unmodified	_TLAELLVLL_					0	0	0		ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	ENSG00000086598|ENST00000262225|TMED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	984.6378051638603	1	984.63396	983.626684	2.8548	0.0028109	3.3332	0.003282	6.188	0.0060929	984.6375326701965	98.958	0.1828	99.038	98.993	99.176	0.080376					8	5	2	0	0	0	0.022807	1	41432	41432		97.075	22.652	1	31579000			34131	1075	16827	16901	39805	39805					0.13421558802315303
TLAELSDLI	9	Unmodified	_TLAELSDLI_					0	0	0		nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	nc|ENSG00000226807|Q6ZUA9|MROH5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5446044802666	1	974.540454	973.533177	1.9524	0.0019027	-0.58532	-0.00057042	1.3671	0.0013323	974.5387736062523	69	0.64935	70.366	69.936	70.585	1.3657					38	20	2	0	0	0	0.09539	1	28897	28897		50.855	2.5092	1	3669500			34132	8003	16828	16902	39806	39806					0.04535214629231632
TLAERFPPAL	10	Unmodified	_TLAERFPPAL_					0	0	0		ENST00000605055.5_1_12:51784906-51785401:-|nuORF;ENST00000603563.5_1_12:51784906-51785014:-|nuORF	ENST00000605055.5_1_12:51784906-51785401:-|nuORF	ENST00000605055.5_1_12:51784906-51785401:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8213989138603	2	557.816399	1113.61824	1.9726	0.0011003	3.7966	0.0021178	5.7692	0.0032181	557.8186062994421	83.469	0.56574	84.657	84.388	84.954	1.1879					30	17	3	0	0	0	0.80011	1	34989	34989		12.241	1.4167	1	3451100			34133	7550	16829	16903	39807	39807					0.06598004885699993
TLAETIQGL	9	Unmodified	_TLAETIQGL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;ENST00000558780.5_2_14:24649650-24651621:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2675964236259	2	473.266207	944.517862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.15	1	55.555	55.055	56.055	1.4048								0	0	0	0.092123	1	22666	22666		36.044	14.298	1				34134	4941	16830	16904	39808	39808					0.04338347832049294
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2827941775322	2	487.281857	972.549162	1.547	0.00075384	0.14794	7.2086E-05	1.695	0.00082593	487.28194721907266	69.373	0.50107	69.373	69.078	69.579	0					44	15	4	0	0	0	0.013238	4	28894	28812;28855;28894;28932		104.8	35.351	1	11527000			34135	2886	16831	16905	39809;39810;39811;39812	39811					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	973.5578491091728	1	973.556438	972.549162	1.5535	0.0015124	0.48933	0.00047639	2.0428	0.0019888	973.556267985766	69.322	0.31291	69.322	69.17	69.483	0					18	9	2	0	0	0	0.033794	2	28902	28848;28902		81.613	30.758	1	969310			34136	2886	16831	16905	39813;39814	39814					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2829162478447	2	487.281857	972.549162	2.2051	0.0010745	0.00078517	3.826E-07	2.2059	0.0010749	487.2818198406319	68.893	0.47072	69.216	68.967	69.438	0.32224					44	14	4	0	0	0	0.013238	4	28809	28767;28809;28848;28887		104.8	44.41	1	10383000			34137	2886	16831	16905	39815;39816;39817;39818	39816					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	973.5583373904228	1	973.556438	972.549162	1.5003	0.0014607	0.56751	0.0005525	2.0678	0.0020132	973.5572272395078	68.853	0.34565	69.175	69.031	69.376	0.32224					20	10	3	0	0	0	0.031324	2	28851	28801;28851		85.357	30.134	1	1447800			34138	2886	16831	16905	39819;39820	39820					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2826721072197	2	487.281857	972.549162	2.0255	0.00098697	0.1202	5.8574E-05	2.1457	0.0010455	487.2818522797738	67.762	0.57523	69.14	68.819	69.394	1.3778					67	18	5	0	0	0	0.013238	4	28431	28382;28431;28472;28530		104.8	33.267	1	35045000			34139	2886	16831	16905	39821;39822;39823;39824	39822					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	973.5577880740166	1	973.556438	972.549162	1.7959	0.0017484	1.0179	0.00099096	2.8137	0.0027393	973.5568540294698	67.764	0.44993	69.142	68.914	69.364	1.3778					35	14	3	0	0	0	0.0054014	2	28447	28398;28447		120.45	27.628	1	4706500			34140	2886	16831	16905	39825;39826	39826					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2825195193291	2	487.281857	972.549162	1.21	0.00058963	0.28583	0.00013928	1.4959	0.00072891	487.28196026341993	67.236	0.52103	69.125	68.86	69.381	1.8889					55	16	4	0	0	0	0.013238	3	28209	28161;28209;28262		104.8	40.563	1	30004000			34141	2886	16831	16905	39827;39828;39829	39828					0.06178920866148019
TLAETLVNL	9	Unmodified	_TLAETLVNL_					0	0	0		ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	ENSG00000139645|ENST00000267116|ANKRD52	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	973.5577270388603	1	973.556438	972.549162	0.98121	0.00095526	0.88312	0.00085977	1.8643	0.001815	973.556734340328	67.258	0.39499	69.147	68.955	69.35	1.8889					28	12	3	0	0	0	0.0092758	2	28234	28188;28234		108	26.384	1	4724000			34142	2886	16831	16905	39830;39831	39831					0.06178920866148019
TLAEVSTRL	9	Unmodified	_TLAEVSTRL_					0	0	0		ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	ENSG00000142178|ENST00000270162|SIK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7877685427666	2	495.284931	988.55531	1.8985	0.0009403	0.30129	0.00014922	2.1998	0.0010895	495.2849413880754	32.387	0.18383	32.681	32.56	32.744	0.29431					8	5	2	0	0	0	0.61061	1	13611	13611		15.248	4.4246	1	460990			34143	2986	16832	16906	39832	39832					0.060574390976512404
TLAGELMSRE	10	Unmodified	_TLAGELMSRE_					0	0	0			REV__ENSG00000144357|ENST00000272793|UBR3	REV__ENSG00000144357|ENST00000272793|UBR3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.3109619021416	2	553.779156	1105.54376	2.8466	0.0015764	1.3714	0.00075943	4.218	0.0023358	553.7808467643218	74.397	0.34891	76.193	75.957	76.306	1.7962					16	10	2	0	0	0	0.12321	1	31124	31124		24.021	9.1823	1	1380700	+		34144	10244	16833	16907	39833	39833					-0.004791259879539211
TLAGKQVHII	10	Unmodified	_TLAGKQVHII_					0	0	0			REV__ENSG00000178996|ENST00000381410|SNX18	REV__ENSG00000178996|ENST00000381410|SNX18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	540.3369018435478	2	540.332216	1078.64988	1.9151	0.0010348	-2.1296	-0.0011507	-0.21457	-0.00011594	540.3310747216185	68.672	2.14	70.525	69.626	71.766	1.853					98	68	2	0	0	0	0.12484	1	28931	28931		1.6526	0	1	2951700	+		34145	11264	16834	16908	39834	39834					0.11369997639667417
TLAIDYLDI	9	Unmodified	_TLAIDYLDI_					0	0	0		ENST00000508110.5_1_4:187347442-187347706:-|nuORF	ENST00000508110.5_1_4:187347442-187347706:-|nuORF	ENST00000508110.5_1_4:187347442-187347706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1036.559252917767	1	1036.5561	1035.54883	1.9553	0.0020268	-0.073816	-7.6515E-05	1.8815	0.0019503	1036.556769857482	71.028	0.30531	72.852	72.667	72.972	1.824					21	9	3	0	0	0	0.042029	2	29828	29777;29828		74.423	10.186	1	2078100			34146	7016	16835	16909	39835;39836	39836					0.03247501146279319
TLAKLTTK	8	Unmodified	_TLAKLTTK_					0	0	0			REV__nc|ENSG00000174130|Q9Y2C9-2|TLR6	REV__nc|ENSG00000174130|Q9Y2C9-2|TLR6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2795898318291	2	438.28166	874.548768	1.3	0.00056977	-1.8592	-0.00081486	-0.55921	-0.00024509	438.28080731657906	73.075	0.37629	73.075	72.872	73.248	0					18	11	2	0	0	0	0.89198	1	30396	30396		0	0	1	1481100	+		34147	11115	16836	16910	39837	39837					0.10647545936922143
TLAKYLMEL	9	Unmodified	_TLAKYLMEL_					0	0	0		CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;CCNB1|p.G359Lfs*6|1|0.05|ENSG00000134057|chr5:69175528-69175529|-/CTCCTTCATCATA|frameshift_variant;nc|ENSG00000134057|P14635-2|CCNB1;ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	541.3005248904228	2	541.301736	1080.58892	1.6107	0.00087188	-1.6475	-0.00089181	-0.036818	-1.993E-05	541.3005017498201	65.553	0.38799	65.553	65.32	65.708	0					29	11	3	0	0	0	0.03071	2	27324	27324;27366		86.332	42.474	1	1976500			34148	125;3473	16837	16911	39838;39839	39838					0.05184724545210884
TLAKYLMEL	9	Unmodified	_TLAKYLMEL_					0	0	0		CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;CCNB1|p.G359Lfs*6|1|0.05|ENSG00000134057|chr5:69175528-69175529|-/CTCCTTCATCATA|frameshift_variant;nc|ENSG00000134057|P14635-2|CCNB1;ENSG00000134057|ENST00000256442|CCNB1;ENSG00000157456|ENST00000288207|CCNB2	CCNB1|p.G359Afs*3|1|0.03|ENSG00000134057|chr5:69175529-69175530|-/CTCT|frameshift_variant;ENSG00000157456|ENST00000288207|CCNB2	ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3010742068291	2	541.301736	1080.58892	1.9368	0.0010484	-3.3958	-0.0018381	-1.459	-0.00078975	541.3006654564557	64.941	0.70209	65.268	65.038	65.74	0.32689					43	21	4	0	0	0	0.019486	2	27168	27168;27217		99.755	52.007	1	2943100			34149	125;3473	16837	16911	39840;39841	39840					0.05184724545210884
TLASLLSGLV	10	Unmodified	_TLASLLSGLV_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2990905642509	2	487.30005	972.585547	0.89595	0.0004366	-2.6174	-0.0012755	-1.7214	-0.00083886	487.2986495683383	51.637	0.37683	53.034	52.807	53.184	1.3966					22	12	2	0	0	0	0.057404	1	21586	21586		75.761	6.4226	1	3634000			34150	4439	16838	16912	39842	39842					0.09815797762860257
TLASLLSGLV	10	Unmodified	_TLASLLSGLV_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2975952029228	2	487.30005	972.585547	-0.29191	-0.00014225	-1.798	-0.00087618	-2.0899	-0.0010184	487.2988616813552	50.981	0.35881	52.957	52.727	53.085	1.9753					21	12	3	0	0	0	0.10797	1	21355	21355		62.573	3.2043	1	3469000			34151	4439	16838	16912	39843	39843					0.09815797762860257
TLASLLSGLV	10	Unmodified	_TLASLLSGLV_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	487.30005	972.585547	1.8974	0.00092459	0.24936	0.00012151	2.1467	0.0010461	487.30005468278455	53.598	0.28732	53.598	53.489	53.776	0	0.39306	0.0017909	NaN	75.761	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1181400			34152	4439	16838	16912							0.09815797762860257
TLASLLSGLV	10	Unmodified	_TLASLLSGLV_					0	0	0		ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	ENSG00000177174|ENST00000317861|OR14C36	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	487.30005	972.585547	2.4924	0.0012145	-1.6845	-0.00082084	0.80792	0.0003937	487.2991305137128	52.908	0.27511	53.231	53.076	53.351	0.32283	0.02614	-9.3796E-05	NaN	75.761	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	790720			34153	4439	16838	16912							0.09815797762860257
TLASLMTYK	9	Unmodified	_TLASLMTYK_					0	0	0		ENST00000507952.1_1_10:75490350-75491018:+|nuORF	ENST00000507952.1_1_10:75490350-75491018:+|nuORF	ENST00000507952.1_1_10:75490350-75491018:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.7784911990166	2	514.27826	1026.54197	2.4918	0.0012815	1.023	0.00052613	3.5149	0.0018076	514.2795983644357	68.467	0.15208	69.845	69.796	69.948	1.3778					6	4	2	0	0	0	0.095205	1	28737	28737		19.257	5.7491	1	1100000			34154	7014	16839	16913	39844	39844					0.029758649940504256
TLATDILMGV	10	Oxidation (M)	_TLATDILM(Oxidation (M))GV_		TLATDILM(1)GV		TLATDILM(48)GV	0	0	1		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.2813598513603	2	525.281	1048.54745	2.5004	0.0013134	-1.2271	-0.0006446	1.2732	0.00066881	525.2806545756464	73.607	0.41308	73.932	73.692	74.105	0.32494					30	12	3	0	0	0	0.20516	1	30791	30791		48.346	22.947	1	927040			34155	1669	16840	16914	39845	39845		28			0.025115437858630685
TLATDILMGV	10	Unmodified	_TLATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1033.562060534954	1	1033.55981	1032.55253	2.1736	0.0022465	0.59977	0.0006199	2.7734	0.0028664	1033.5594473358892	80.765	0.32982	81.998	81.863	82.193	1.2332					15	10	2	0	0	0	0.31135	1	33927	33927		54.774	0	1	1802800			34156	1669	16840	16915	39846	39846					0.03755847648494637
TLATDILMGV	10	Unmodified	_TLATDILMGV_					0	0	0		ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	ENSG00000109606|ENST00000336812|DHX15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2860595583916	2	517.283543	1032.55253	1.5613	0.00080765	2.0199	0.0010449	3.5813	0.0018525	517.2859751411091	80.429	0.81771	82.146	81.475	82.293	1.7167					45	26	3	0	0	0	0.63089	1	33707	33707		32.305	18.798	1	4000400			34157	1669	16840	16915	39847	39847					0.03755847648494637
TLAVPPGK	8	Unmodified	_TLAVPPGK_					0	0	0		ENST00000518647.5_1_8:42129618-42174557:+|nuORF	ENST00000518647.5_1_8:42129618-42174557:+|nuORF	ENST00000518647.5_1_8:42129618-42174557:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2848083376884	2	391.742171	781.469789	1.8245	0.00071474	-1.012	-0.00039645	0.81251	0.0003183	391.7409660123888	79.752	0.47592	80.053	79.782	80.258	0.30047					20	14	2	0	0	0	2.3239	1	33400	33400		0.69038	0	1	1296400			34158	7061	16841	16916	39848	39848					0.07031318702661338
TLAYDISLRL	10	Unmodified	_TLAYDISLRL_					0	0	0			REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	REV__nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	583.3128539919853	2	582.834788	1163.65502	4.0072	0.0023355	-0.46464	-0.00027081	3.5426	0.0020647	582.8334040592971	90.195	0.37508	91.599	91.431	91.806	1.4045					14	11	2	0	0	0	0.12493	1	38077	38077		10.824	0	1	1039100	+		34159	8845	16842	16917	39849	39849					0.07974256711622729
TLCKPLVPR	9	Unmodified	_TLCKPLVPR_					0	0	0		ENSG00000068745|ENST00000328631|IP6K2;nc|ENSG00000068745|Q9UHH9-3|IP6K2;nc|ENSG00000068745|Q9UHH9-6|IP6K2;nc|ENSG00000068745|Q9UHH9-2|IP6K2;nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-5|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8748657107353	3	342.8758	1025.60557	-1.6052	-0.00055039	-0.14007	-4.8027E-05	-1.7453	-0.00059842	342.87564392034113	37.206	1.0173	37.206	36.643	37.66	0					116	47	3	0	0	0	0.77876	2	15640	15640;15724		4.1895	1.9067	1	16067000			34160	834	16843	16918	39850;39851	39850					0.09379270221802471
TLCKPLVPR	9	Unmodified	_TLCKPLVPR_					0	0	0		ENSG00000068745|ENST00000328631|IP6K2;nc|ENSG00000068745|Q9UHH9-3|IP6K2;nc|ENSG00000068745|Q9UHH9-6|IP6K2;nc|ENSG00000068745|Q9UHH9-2|IP6K2;nc|ENSG00000068745|Q9UHH9-4|IP6K2;nc|ENSG00000068745|Q9UHH9-5|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	ENSG00000068745|ENST00000328631|IP6K2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	342.8743469119072	3	342.8758	1025.60557	0.31894	0.00010936	-3.1067	-0.0010652	-2.7878	-0.00095586	342.8746217455895	34.422	0.32555	36.244	36.106	36.431	1.8227					39	31	2	0	0	0	0.77025	2	14443	14443;14484		4.5289	4.1895	1	18690000			34161	834	16843	16918	39852;39853	39852					0.09379270221802471
TLDAGNIKL	9	Unmodified	_TLDAGNIKL_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	472.9727050662041	2	472.7742	943.533846	2.2168	0.001048	-0.029108	-1.3761E-05	2.1877	0.0010343	472.77424331541295	40.055	0.28648	40.055	39.883	40.169	0					20	8	3	0	0	0	0.084243	1	16755	16755		26.268	11.43	1	1026500			34162	4943	16844	16919	39854	39854					0.059820540689429436
TLDAGNIKL	9	Unmodified	_TLDAGNIKL_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7749511599541	2	472.7742	943.533846	2.3848	0.0011275	1.6531	0.00078156	4.0379	0.001909	472.77427350352303	39.521	0.28173	39.834	39.673	39.955	0.31263					13	8	2	0	0	0	0.3091	1	16646	16646		24.991	6.8446	1	940090			34163	4943	16844	16919	39855	39855					0.059820540689429436
TLDAGNIKL	9	Unmodified	_TLDAGNIKL_					0	0	0		nc|ENSG00000196504|O75400-2|PRPF40A;nc|ENSG00000196504|O75400-3|PRPF40A;nc|ENSG00000196504|O75400|PRPF40A;ENSG00000196504|ENST00000545856|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	nc|ENSG00000196504|O75400-2|PRPF40A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7740356326103	2	472.7742	943.533846	1.0454	0.00049421	-0.057077	-2.6984E-05	0.98827	0.00046723	472.7738750411611	37.567	0.2612	39.388	39.256	39.517	1.8202					13	8	2	0	0	0	0.10473	2	15755	15755;15800		47.749	7.7914	1	2424400			34164	4943	16844	16919	39856;39857	39856					0.059820540689429436
TLDATASRRG	10	Unmodified	_TLDATASRRG_					0	0	0			REV__ENST00000457484.6_1_7:1624903-1627631:+|nuORF	REV__ENST00000457484.6_1_7:1624903-1627631:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2814819216728	2	524.280712	1046.54687	2.9138	0.0015277	-2.546	-0.0013348	0.36783	0.00019285	524.2808144131709	72.394	1.7113	73.723	73.141	74.853	1.3297					141	54	5	0	0	0	0.78468	1	30457	30457		13.906	0	1	4134300	+		34165	13170	16845	16920	39858	39858					0.02545885181052654
TLDAVRLR	8	Unmodified	_TLDAVRLR_					0	0	0			REV__ENSG00000185028|ENST00000328278|LRRC14B	REV__ENSG00000185028|ENST00000328278|LRRC14B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2891113162041	2	472.287808	942.561064	2.2787	0.0010762	0.075276	3.5552E-05	2.354	0.0011118	472.28760227699803	78.987	1.1995	78.987	78.441	79.641	0					96	38	5	0	0	0	0.89051	1	32787	32787		2.3027	0	1	189500000	+		34166	11442	16846	16921	39859	39859					0.0874858239999412
TLDDGDYFT	9	Unmodified	_TLDDGDYFT_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.4840881228447	3	349.48195	1045.42402	1.6201	0.00056619	3.2023	0.0011191	4.8223	0.0016853	349.48319521302824	64.579	0.35249	66.507	66.325	66.678	1.928					27	10	3	0	0	0	0.52273	1	27075	27075		14.405	3.6059	1	1889300	+		34167	8656	16847	16922	39860	39860					-0.09687416060887699
TLDDGDYFT	9	Unmodified	_TLDDGDYFT_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	349.48195	1045.42402	1.8107	0.0006328	3.7665	0.0013163	5.5772	0.0019491	349.48328843708686	65.009	0.43909	66.408	66.224	66.663	1.3989	-0.049364	0.00029269	NaN	14.405	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1776800	+		34168	8656	16847	16922							-0.09687416060887699
TLDDGDYFT	9	Unmodified	_TLDDGDYFT_					0	0	0			REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	REV__nc|ENSG00000063015|Q53EL9-3|SEZ6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	349.48195	1045.42402	1.6201	0.00056619	3.2023	0.0011191	4.8223	0.0016853	349.48319521302824	64.579	0.35249	66.507	66.325	66.678	1.928	0.049364	-0.0002989	NaN	14.405	27	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1889300	+		34169	8656	16847	16922							-0.09687416060887699
TLDDIMAAV	9	Unmodified	_TLDDIMAAV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	948.4667846560478	1	948.47066	947.463383	1.8492	0.0017539	-1.1894	-0.0011282	0.65971	0.00062572	948.4693631991693	67.075	0.37035	67.398	67.188	67.558	0.32269					19	12	2	0	0	0	0.09539	1	28077	28077		50.855	18.738	1	1119800			34170	2533	16848	16923	39861	39861					-0.012449873110199405
TLDDIMAAV	9	Unmodified	_TLDDIMAAV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.4738647341728	1	948.47066	947.463383	1.6292	0.0015453	-0.92387	-0.00087626	0.70536	0.00066901	948.4699961790521	65.956	0.48393	67.355	67.152	67.636	1.3989					36	15	3	0	0	0	0.0082953	3	27636	27636;27682;27739		109.63	42.285	1	6808400			34171	2533	16848	16923	39862;39863;39864	39862					-0.012449873110199405
TLDDIMAAV	9	Unmodified	_TLDDIMAAV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.4728271365166	1	948.47066	947.463383	1.9919	0.0018892	-1.9397	-0.0018398	0.052135	4.9449E-05	948.4691560784504	65.604	0.399	67.512	67.28	67.679	1.9085					30	12	3	0	0	0	0.028763	2	27487	27487;27542		89.427	29.037	1	6102800			34172	2533	16848	16923	39865;39866	39865					-0.012449873110199405
TLDDIMAAV	9	Unmodified	_TLDDIMAAV_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	948.47066	947.463383	1.6193	0.0015358	-1.1175	-0.0010599	0.50179	0.00047593	948.4700718841979	67.333	0.30324	67.333	67.201	67.504	0	-0.066047	0.00025438	NaN	109.63	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	802560			34173	2533	16848	16923							-0.012449873110199405
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.5163452029228	1	930.514239	929.506963	1.7106	0.0015917	0.41116	0.00038259	2.1217	0.0019743	930.5148242936688	73.848	0.37194	73.848	73.642	74.014	0					27	11	3	0	0	0	0.03795	2	30708	30708;30756		77.984	17.595	1	1809600			34174	7871	16849	16924	39867;39868	39867					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7613403201103	2	465.760758	929.506963	2.1259	0.00099015	-0.1097	-5.1092E-05	2.0162	0.00093906	465.760379884959	73.842	0.30914	73.842	73.642	73.952	0					18	9	2	0	0	0	0.03795	1	30732	30732		77.984	17.595	1	1655400			34175	7871	16849	16924	39869	39869					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.5171386599541	1	930.514239	929.506963	2.3415	0.0021788	0.82129	0.00076423	3.1627	0.002943	930.514809381102	73.507	0.34422	73.832	73.663	74.008	0.32494					19	10	2	0	0	0	0.0082953	2	30759	30714;30759		109.63	31.645	1	2492200			34176	7871	16849	16924	39870;39871	39871					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7615539431572	2	465.760758	929.506963	2.9732	0.0013848	-0.88596	-0.00041264	2.0872	0.00097214	465.7597792618377	73.475	0.34116	73.8	73.636	73.977	0.32494					17	10	2	0	0	0	0.15478	1	30748	30748		38.151	13.477	1	1185800			34177	7871	16849	16924	39872	39872					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	930.5184203982353	1	930.514239	929.506963	3.2063	0.0029835	-0.010007	-9.3118E-06	3.1963	0.0029742	930.5138649063622	72.582	0.55176	73.911	73.612	74.164	1.3297					48	17	4	0	0	0	0.022807	2	30388	30388;30533		97.075	11.718	1	10960000			34178	7871	16849	16924	39873;39874	39873					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7616760134697	2	465.760758	929.506963	3.1575	0.0014707	0.1616	7.5265E-05	3.3191	0.0015459	465.7605884958872	72.567	0.52036	73.897	73.58	74.101	1.3297					45	16	4	0	0	0	0.01705	3	30451	30400;30451;30506		101.72	31.006	1	10423000			34179	7871	16849	16924	39875;39876;39877	39876					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	930.5161620974541	1	930.514239	929.506963	2.9028	0.0027011	0.18205	0.0001694	3.0848	0.0028705	930.5137309747304	72.154	0.57843	73.964	73.62	74.198	1.8101					46	18	3	0	0	0	0.022807	3	30228	30228;30277;30335		97.075	0	1	11350000			34180	7871	16849	16924	39878;39879;39880	39878					0.03938945457775844
TLDDLIAAV	9	Unmodified	_TLDDLIAAV_					0	0	0		nc|ENSG00000131503|Q8IWZ3-6|ANKHD1;ENST00000462121.1_1_5:139876268-139877642:+|nuORF;ENSG00000131503|ENST00000360839|ANKHD1;nc|ENSG00000131503|Q8IWZ3-4|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7617980837822	2	465.760758	929.506963	3.0289	0.0014108	-0.4035	-0.00018793	2.6254	0.0012228	465.76036307633757	72.065	0.60942	73.888	73.634	74.243	1.824					45	19	3	0	0	0	0.028763	2	30281	30231;30281		89.427	18.711	1	8133200			34181	7871	16849	16924	39881;39882	39882					0.03938945457775844
TLDEGLIEF	9	Unmodified	_TLDEGLIEF_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000489492.1_1_2:27688276-27688770:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1036.520190417767	1	1036.51972	1035.51244	0.94816	0.00098278	1.0171	0.0010543	1.9653	0.0020371	1036.5206995316883	71.735	0.24902	73.076	72.967	73.216	1.3415					13	7	2	0	0	0	0.031324	1	30102	30102		85.357	0	1	1925500			34182	2806	16850	16925	39883	39883					-0.003893757504329187
TLDEGLIEF	9	Unmodified	_TLDEGLIEF_					0	0	0		nc|ENSG00000138002|Q9UG01-2|IFT172;ENSG00000138002|ENST00000260570|IFT172;IFT172|p.R1483Sfs*10|1|0.16|ENSG00000138002|chr2:27447902-27447903|-/ACTGCAAGCTCCGCTTCCCGGGTTCA|frameshift_variant;IFT172|p.Q926Hfs*31|1|0.07|ENSG00000138002|chr2:27459387-27459388|-/CTTGTGGGCTTGTTCCCAACGACCAGCCTGGG|frameshift_variant;ENST00000507184.5_1_2:27680991-27709067:-|nuORF;ENST00000489492.1_1_2:27688276-27688770:-|nuORF	nc|ENSG00000138002|Q9UG01-2|IFT172	nc|ENSG00000138002|Q9UG01-2|IFT172	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1036.522509753704	1	1036.51972	1035.51244	2.4095	0.0024974	-0.7235	-0.00074992	1.686	0.0017475	1036.5173236296075	71.308	0.25042	73.132	73.003	73.253	1.8239					13	7	2	0	0	0	0.059546	1	29908	29908		64.236	0	1	1984600			34183	2806	16850	16925	39884	39884					-0.003893757504329187
TLDLSELL	8	Unmodified	_TLDLSELL_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2561523318291	2	452.255308	902.496064	2.444	0.0011053	0.32019	0.00014481	2.7642	0.0012501	452.25539431013647	68.467	0.4566	69.845	69.583	70.04	1.3778					34	14	3	0	0	0	0.34339	1	28733	28733		67.035	0	1	9116400	+		34184	11309	16851	16926	39885	39885					0.04091543083495708
TLDLSELL	8	Unmodified	_TLDLSELL_					0	0	0			REV__ENSG00000181004|ENST00000314218|BBS12	REV__ENSG00000181004|ENST00000314218|BBS12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2560912966728	2	452.255308	902.496064	2.3205	0.0010494	-0.26755	-0.000121	2.0529	0.00092844	452.2550930528945	67.85	0.49045	69.72	69.458	69.949	1.87					34	15	3	0	0	0	0.34339	1	28458	28458		67.035	3.4725	1	4359600	+		34185	11309	16851	16926	39886	39886					0.04091543083495708
TLDLYALDL	9	Unmodified	_TLDLYALDL_					0	0	0		ENSG00000163873|ENST00000373091|GRIK3;nc|ENSG00000163873|Q13003-2|GRIK3	ENSG00000163873|ENST00000373091|GRIK3	ENSG00000163873|ENST00000373091|GRIK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1036.561938464642	1	1036.5561	1035.54883	1.4015	0.0014527	2.3845	0.0024717	3.786	0.0039244	1036.557924822983	71.425	0.30487	72.767	72.601	72.905	1.3415					20	9	3	0	0	0	0.076627	1	29962	29962		57.471	6.6163	1	1932700			34186	3729	16852	16927	39887	39887					0.03247501146279319
TLDNDILL	8	Unmodified	_TLDNDILL_					0	0	0		ENSG00000275896|ENST00000539842|PRSS2	ENSG00000275896|ENST00000539842|PRSS2	ENSG00000275896|ENST00000539842|PRSS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1730834841728	2	458.752933	915.491313	3.0823	0.001414	-1.4522	-0.00066619	1.6301	0.00074782	458.75253135274625	69.739	0.31477	71.577	71.372	71.687	1.8378					13	9	2	0	0	0	2.3239	1	29225	29225		2.0598	0	1	743440			34187	5465	16853	16928	39888	39888					0.030186589407207975
TLDNGIIRV	9	Unmodified	_TLDNGIIRV_					0	0	0		nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1;ENST00000564785.5_1_15:75651254-75651557:-|nuORF;ENST00000563368.5_1_15:75650962-75652298:-|nuORF;ENST00000563441.5_1_15:75651254-75660924:-|nuORF;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7950012087822	2	500.792924	999.571294	1.6176	0.00081007	1.5871	0.0007948	3.2047	0.0016049	500.7942846609546	39.932	0.24741	41.795	41.677	41.925	1.8624					12	7	2	0	0	0	0.35391	1	16762	16762		22.736	4.5899	1	730710			34188	2914	16854	16929	39889	39889					0.07149145334562945
TLDNGIIRV	9	Unmodified	_TLDNGIIRV_					0	0	0		nc|ENSG00000140400|Q9NTJ4-3|MAN2C1;ENSG00000140400|ENST00000267978|MAN2C1;nc|ENSG00000140400|Q9NTJ4-4|MAN2C1;ENST00000564785.5_1_15:75651254-75651557:-|nuORF;ENST00000563368.5_1_15:75650962-75652298:-|nuORF;ENST00000563441.5_1_15:75651254-75660924:-|nuORF;nc|ENSG00000140400|Q9NTJ4-2|MAN2C1	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	nc|ENSG00000140400|Q9NTJ4-3|MAN2C1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	500.792924	999.571294	2.3772	0.0011905	1.7738	0.0008883	4.151	0.0020788	500.79355253795507	40.339	0.21059	41.649	41.514	41.725	1.3102	-0.072618	0.00011619	NaN	22.736	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	900960			34189	2914	16854	16929							0.07149145334562945
TLDNNVLTL	9	Unmodified	_TLDNNVLTL_					0	0	0		ENSG00000107537|ENST00000263038|PHYH;ENST00000463730.1_1_10:13337446-13342087:-|nuORF	ENSG00000107537|ENST00000263038|PHYH	ENSG00000107537|ENST00000263038|PHYH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7758972048759	2	501.776939	1001.53933	0.44518	0.00022338	0.30508	0.00015308	0.75026	0.00037646	501.7770753006165	56.911	0.17891	58.879	58.814	58.992	1.9684					9	5	2	0	0	0	0.091139	1	23885	23885		52.268	12.311	1	1742400			34190	1601	16855	16930	39890	39890					0.038617328607642776
TLDNQPDID	9	Unmodified	_TLDNQPDID_					0	0	0			REV__ITGB3-DYNLRB1|1|fusion	REV__ITGB3-DYNLRB1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7404662966728	2	515.738011	1029.46147	3.3055	0.0017048	1.9083	0.00098418	5.2138	0.002689	515.7388901369142	64.966	0.40791	66.364	66.224	66.632	1.3989					20	12	2	0	0	0	0.15456	1	27258	27258		38.176	3.7738	1	2127000	+		34191	9688	16856	16931	39891	39891					-0.0520832479528508
TLDPACEDMF	10	Unmodified	_TLDPACEDMF_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	571.8107787966728	2	571.23065	1140.44675	2.9048	0.0016593	0.30261	0.00017286	3.2074	0.0018322	571.2297674133829	74.598	0.22128	76.379	76.26	76.481	1.7817					9	6	2	0	0	0	0.12493	1	31243	31243		10.824	4.1008	1	660080			34192	4665	16857	16932	39892	39892					-0.11785856259302818
TLDPACEDMF	10	Unmodified	_TLDPACEDMF_					0	0	0		ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	ENSG00000183770|ENST00000648323|FOXL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	571.23065	1140.44675	2.9149	0.0016651	-1.2219	-0.00069799	1.693	0.00096709	571.230623197726	75.049	0.27861	76.355	76.214	76.493	1.3063	-0.012238	-0.00041189	NaN	14.838	19	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	877740			34193	4665	16857	16932							-0.11785856259302818
TLDQTLLEL	9	Unmodified	_TLDQTLLEL_					0	0	0		ENST00000378300.9_1_9:35682080-35682179:-|nuORF;nc|ENSG00000198467|P07951-3|TPM2;nc|ENSG00000198467|P07951-2|TPM2	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2935058474541	2	523.292422	1044.57029	2.0625	0.0010793	0.40651	0.00021273	2.469	0.001292	523.2924253832027	75.704	0.41298	75.704	75.471	75.884	0					28	12	3	0	0	0	0.01454	2	31493	31493;31532		103.75	0	1	5339300			34194	6203	16858	16933	39893;39894	39893					0.04978886175013031
TLDQTLLEL	9	Unmodified	_TLDQTLLEL_					0	0	0		ENST00000378300.9_1_9:35682080-35682179:-|nuORF;nc|ENSG00000198467|P07951-3|TPM2;nc|ENSG00000198467|P07951-2|TPM2	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1045.578417956829	1	1045.57757	1044.57029	1.8972	0.0019836	0.195	0.00020389	2.0922	0.0021875	1045.5785622186809	75.707	0.22099	75.707	75.534	75.755	0					10	6	2	0	0	0	0.17276	1	31528	31528		36.127	10.728	1	734090			34195	6203	16858	16933	39895	39895					0.04978886175013031
TLDQTLLEL	9	Unmodified	_TLDQTLLEL_					0	0	0		ENST00000378300.9_1_9:35682080-35682179:-|nuORF;nc|ENSG00000198467|P07951-3|TPM2;nc|ENSG00000198467|P07951-2|TPM2	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.2939941287041	2	523.292422	1044.57029	2.6683	0.0013963	-0.022172	-1.1602E-05	2.6462	0.0013847	523.291830882243	75.24	0.44566	75.565	75.361	75.807	0.32463					28	13	3	0	0	0	0.037761	1	31502	31502		78.149	10.069	1	5753400			34196	6203	16858	16933	39896	39896					0.04978886175013031
TLDQTLLEL	9	Unmodified	_TLDQTLLEL_					0	0	0		ENST00000378300.9_1_9:35682080-35682179:-|nuORF;nc|ENSG00000198467|P07951-3|TPM2;nc|ENSG00000198467|P07951-2|TPM2	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	ENST00000378300.9_1_9:35682080-35682179:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1045.57757	1044.57029	3.0203	0.003158	2.3773	0.0024857	5.3976	0.0056436	1045.5772530977063	75.287	0.25613	75.612	75.425	75.681	0.32463	-0.047866	0.001543	NaN	36.127	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	724290			34197	6203	16858	16933							0.04978886175013031
TLDRHLPYDRP	11	Unmodified	_TLDRHLPYDRP_					0	0	0		nc|ENSG00000183773|Q96NN9-2|AIFM3;nc|ENSG00000183773|Q96NN9-3|AIFM3;ENSG00000183773|ENST00000440238|AIFM3	nc|ENSG00000183773|Q96NN9-2|AIFM3	nc|ENSG00000183773|Q96NN9-2|AIFM3	MSMS	GG20161007_CRH_Patient100_W632_02	4	691.8630248904228	2	691.8624	1381.71025	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.57	1	113.72	113.22	114.22	0.14912								0	0	0	0.63775	1	49163	49163		2.7352	0	1				34198	7945	16859	16934	39897	39897					0.03466063232076522
TLEEFSNEER	10	Unmodified	_TLEEFSNEER_					0	0	0		ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	627.2900268435478	2	627.285857	1252.55716	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.326	1	54.326	53.826	54.826	0								0	0	0	0.66166	1	22642	22642		1.6526	0	1				34199	1440	16860	16935	39898	39898					-0.059015966750621374
TLEIPFHEIV	10	Unmodified	_TLEIPFHEIV_					0	0	0		ENSG00000116218|ENST00000367615|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3303100466728	2	599.329339	1196.64412	2.9789	0.0017854	0.49241	0.00029512	3.4714	0.0020805	599.3291762070634	74.37	0.4137	76.166	76.021	76.434	1.7962					30	12	3	0	0	0	0.32206	1	31234	31234		37.974	5.857	1	2485300			34200	1961	16861	16936	39899	39899					0.05366854337330551
TLEIPFHEIV	10	Unmodified	_TLEIPFHEIV_					0	0	0		ENSG00000116218|ENST00000367615|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	ENSG00000116218|ENST00000367615|NPHS2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	599.329339	1196.64412	3.1738	0.0019022	2.5621	0.0015356	5.736	0.0034377	599.3301852918252	74.806	0.37461	76.112	75.905	76.28	1.3063	-0.026684	0.0015408	NaN	37.974	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2303400			34201	1961	16861	16936							0.05366854337330551
TLEKRCEESII	11	Unmodified	_TLEKRCEESII_					0	0	0			REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.8496581912041	2	660.845027	1319.6755	2.1553	0.0014243	3.9301	0.0025972	6.0853	0.0040215	660.8483662615129	39.959	0.18346	41.269	41.177	41.361	1.3102					7	5	2	0	0	0	0.91768	1	16766	16766		8.7454	0.58988	1	678600	+		34202	10164	16862	16937	39900	39900					0.028450593091065457
TLEKRCEESII	11	Unmodified	_TLEKRCEESII_					0	0	0			REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	661.3502075076103	2	660.845027	1319.6755	1.5213	0.0010053	2.5593	0.0016913	4.0806	0.0026967	660.8470234260006	39.518	0.24648	41.381	41.216	41.463	1.8624					13	7	2	0	0	0	0.91768	1	16591	16591		8.7454	0.58988	1	557300	+		34203	10164	16862	16937	39901	39901					0.028450593091065457
TLEKRCEESII	11	Unmodified	_TLEKRCEESII_					0	0	0			REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	660.845027	1319.6755	2.1553	0.0014243	3.9301	0.0025972	6.0853	0.0040215	660.8483662615129	39.959	0.18346	41.269	41.177	41.361	1.3102	-0.05596	0.00059873	NaN	8.7454	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678600	+		34204	10164	16862	16937							0.028450593091065457
TLEKRCEESII	11	Unmodified	_TLEKRCEESII_					0	0	0			REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	REV__ENST00000393910.5_1_17:39983688-39992209:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	660.845027	1319.6755	1.5213	0.0010053	2.5593	0.0016913	4.0806	0.0026967	660.8470234260006	39.518	0.24648	41.381	41.216	41.463	1.8624	0.05596	-0.0012129	NaN	8.7454	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	557300	+		34205	10164	16862	16937							0.028450593091065457
TLELKHSLLM	10	Unmodified	_TLELKHSLLM_					0	0	0			REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.5618469119072	3	395.56177	1183.66348	0.20664	8.174E-05	0.39446	0.00015604	0.60111	0.00023777	395.5619611657477	53.154	0.51328	54.555	54.152	54.665	1.4005					36	15	3	0	0	0	0.86817	1	22254	22254		2.6312	0	1	1731800	+		34206	9219	16863	16938	39902	39902					0.07899487356576174
TLELKHSLLM	10	Unmodified	_TLELKHSLLM_					0	0	0			REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	REV__nc|ENSG00000107036|Q4ADV7-2|RIC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.5603210330009	3	395.56177	1183.66348	1.0149	0.00040146	-1.2006	-0.0004749	-0.18566	-7.3441E-05	395.56109883462864	52.6	0.75149	54.572	53.985	54.736	1.9722					47	23	3	0	0	0	0.84303	1	21964	21964		4.4062	0	1	2746000	+		34207	9219	16863	16938	39903	39903					0.07899487356576174
TLENPADVPV	10	Unmodified	_TLENPADVPV_					0	0	0		ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	ENSG00000075568|ENST00000186436|TMEM131	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7778808474541	2	527.774396	1053.53424	2.974	0.0015696	3.439	0.001815	6.4129	0.0033846	527.7763046470343	70.413	0.63716	71.766	71.429	72.066	1.3536					48	19	3	0	0	0	0.77604	1	29481	29481		14.838	0.25658	1	3475700			34208	935	16864	16939	39904	39904					0.009614289981300317
TLESALLSTV	10	Unmodified	_TLESALLSTV_					0	0	0			REV__DIAPH1|p.A1228V|1|0.1|ENSG00000131504|chr5:141516987-141516987|G/A|missense_variant	REV__DIAPH1|p.A1228V|1|0.1|ENSG00000131504|chr5:141516987-141516987|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.2916137576103	2	517.292422	1032.57029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.722	1	82.003	81.503	82.503	0.2802								0	0	0	0.64929	1	34169	34169		14.838	2.3067	1		+		34209	8444	16865	16940	39905	39905					0.05530886174983607
TLEVEEKIEVF	11	Unmodified	_TLEVEEKIEVF_					0	0	0		tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	668.3574096560478	2	668.355751	1334.69695	2.6007	0.0017382	-0.01462	-9.7717E-06	2.5861	0.0017284	668.3558549425452	93.389	0.2902	93.557	93.387	93.678	0.16835					20	8	3	0	0	0	0.22376	1	39083	39083		38.176	2.0485	1	858350			34210	16960	16866	16941	39906	39906					0.04298767609452625
TLEVEEKIEVF	11	Unmodified	_TLEVEEKIEVF_					0	0	0		tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	668.3581420779228	2	668.355751	1334.69695	3.9514	0.0026409	0.86054	0.00057514	4.8119	0.0032161	668.3565405970646	92.543	0.3926	93.479	93.309	93.702	0.93624					26	11	3	0	0	0	0.32985	1	38991	38991		29.841	2.2118	1	2412800			34211	16960	16866	16941	39907	39907					0.04298767609452625
TLEVEEKIEVF	11	Unmodified	_TLEVEEKIEVF_					0	0	0		tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	tr|A0A7D6VV17|A0A7D6VV17_9CLOTDNA-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09180PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	668.3560668826103	2	668.355751	1334.69695	3.0166	0.0020162	0.63333	0.00042329	3.6499	0.0024395	668.356257535622	92.183	0.38884	93.51	93.277	93.666	1.3269					23	11	3	0	0	0	0.31168	1	38769	38769		31.268	0	1	2566000			34212	16960	16866	16941	39908	39908					0.04298767609452625
TLFDYEVRL	9	Unmodified	_TLFDYEVRL_					0	0	0		ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	578.3078491091728	2	578.305864	1154.59717	1.6806	0.00097189	-1.281	-0.00074083	0.39955	0.00023106	578.305620821133	65.962	0.31726	65.962	65.806	66.123	0					24	9	3	0	0	0	0.42097	1	27476	27476		19.362	4.1135	1	1652000			34213	5466	16867	16942	39909	39909					0.02605994786199517
TLFDYEVRL	9	Unmodified	_TLFDYEVRL_					0	0	0		ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	578.3057739138603	2	578.305864	1154.59717	1.8117	0.0010477	0.20926	0.00012102	2.0209	0.0011687	578.3059892873033	65.44	0.38252	65.767	65.578	65.96	0.32689					20	11	2	0	0	0	0.42097	2	27383	27383;27430		19.362	9.288	1	1256600			34214	5466	16867	16942	39910;39911	39910					0.02605994786199517
TLFDYEVRL	9	Unmodified	_TLFDYEVRL_					0	0	0		ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.3078491091728	2	578.305864	1154.59717	2.8189	0.0016302	-1.9894	-0.0011505	0.82953	0.00047972	578.3060220484401	64.284	0.33591	65.691	65.497	65.833	1.4071					31	10	4	0	0	0	0.036104	2	26976	26930;26976		79.596	41.421	1	7174800			34215	5466	16867	16942	39912;39913	39913					0.02605994786199517
TLFDYEVRL	9	Unmodified	_TLFDYEVRL_					0	0	0		ENSG00000276043|ENST00000650932|UHRF1;nc|ENSG00000276043|Q96T88-2|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	ENSG00000276043|ENST00000650932|UHRF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.3072387576103	2	578.305864	1154.59717	2.8675	0.0016583	-2.9067	-0.001681	-0.039273	-2.2712E-05	578.3060769677495	63.73	0.43162	65.658	65.457	65.888	1.928					31	13	3	0	0	0	0.019486	2	26741	26695;26741		99.755	55.983	1	5168300			34216	5466	16867	16942	39914;39915	39915					0.02605994786199517
TLFGEYYCDI	10	Unmodified	_TLFGEYYCDI_					0	0	0		ENST00000514589.5_1_4:76416932-76439505:-|nuORF;nc|ENSG00000163743|Q96PM5-3|RCHY1;nc|ENSG00000163743|Q96PM5-4|RCHY1;nc|ENSG00000163743|Q96PM5-8|RCHY1;nc|ENSG00000163743|Q96PM5-7|RCHY1;nc|ENSG00000163743|Q96PM5-6|RCHY1;nc|ENSG00000163743|Q96PM5-2|RCHY1;ENSG00000163743|ENST00000324439|RCHY1	ENST00000514589.5_1_4:76416932-76439505:-|nuORF	ENST00000514589.5_1_4:76416932-76439505:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5156738162041	3	408.514485	1222.52163	1.4343	0.00058593	2.5682	0.0010491	4.0025	0.0016351	408.85012488769996	71.204	1.5377	73.028	72.518	74.056	1.824					161	49	5	0	0	0	0.85604	1	29948	29948		3.3196	2.2482	1	5702100			34217	3719	16868	16943	39916	39916					-0.08073350456402295
TLFHEPPAV	9	Unmodified	_TLFHEPPAV_					0	0	0			REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7701599001884	2	505.768917	1009.52328	2.9544	0.0014943	0.26328	0.00013316	3.2177	0.0016274	505.7693057206094	73.877	0.40108	75.673	75.377	75.778	1.7962					23	12	3	0	0	0	0.27148	1	31001	31001		26.884	6.43	1	1069400	+		34218	12263	16869	16944	39917	39917					0.018900714145161146
TLFHEPPAV	9	Unmodified	_TLFHEPPAV_					0	0	0			REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	505.768917	1009.52328	2.8408	0.0014368	1.0533	0.00053274	3.8941	0.0019695	505.7702459020789	75.353	0.3186	75.678	75.458	75.776	0.32463	0.019568	3.7808E-05	NaN	26.884	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299150	+		34219	12263	16869	16944							0.018900714145161146
TLFHEPPAV	9	Unmodified	_TLFHEPPAV_					0	0	0			REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	505.768917	1009.52328	3.6231	0.0018324	1.966	0.00099433	5.5891	0.0028268	505.77015894293726	74.306	0.48726	75.624	75.31	75.797	1.318	-0.034287	0.00096099	NaN	26.884	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1073600	+		34220	12263	16869	16944							0.018900714145161146
TLFHEPPAV	9	Unmodified	_TLFHEPPAV_					0	0	0			REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	REV__ENST00000283206.8_1_2:112874356-112874578:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	505.768917	1009.52328	2.9544	0.0014943	0.26328	0.00013316	3.2177	0.0016274	505.7693057206094	73.877	0.40108	75.673	75.377	75.778	1.7962	0.014719	-0.00076136	NaN	26.884	23	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1069400	+		34221	12263	16869	16944							0.018900714145161146
TLFLILKRV	9	Unmodified	_TLFLILKRV_					0	0	0			REV__ENSG00000177409|ENST00000318238|SAMD9L	REV__ENSG00000177409|ENST00000318238|SAMD9L	MSMS	GG20161007_CRH_Patient100_W632_01	3	368.2478210330009	3	368.249743	1101.7274	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.01	1	108.17	107.67	108.67	0.15781								0	0	0	0.42693	1	46609	46609		0.26902	0	1		+		34222	11215	16870	16945	39918	39918					0.1806063557583002
TLFLKYLY	8	Unmodified	_TLFLKYLY_					0	0	0		ENST00000583108.5_1_17:65735015-65739972:+|nuORF;ENSG00000130935|ENST00000253247|NOL11	ENST00000583108.5_1_17:65735015-65739972:+|nuORF	ENST00000583108.5_1_17:65735015-65739972:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	529.9658080935478	2	530.807511	1059.60047	1.9767	0.0010493	-3.7692	-0.0020007	-1.7925	-0.00095146	530.8065035216964	53.748	0.22538	53.748	53.614	53.84	0					11	6	2	0	0	0	2.3239	1	22374	22374		12.532	0	1	430980			34223	2470	16871	16946	39919	39919					0.07305289630835432
TLFNVIKSV	9	Unmodified	_TLFNVIKSV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.8115417361259	2	510.808042	1019.60153	2.2447	0.0011466	0.65896	0.0003366	2.9036	0.0014832	510.8080316289089	59.129	0.34824	59.129	58.942	59.29	0					13	10	2	0	0	0	0.22861	1	24634	24634		29.841	13.691	1	832370			34224	1195	16872	16947	39920	39920					0.09251503999769284
TLFNVIKSV	9	Unmodified	_TLFNVIKSV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.8105956912041	2	510.808042	1019.60153	2.6168	0.0013367	1.3149	0.00067165	3.9317	0.0020083	510.80856822976824	58.522	0.25148	58.845	58.683	58.934	0.32299					12	7	2	0	0	0	0.16939	1	24516	24516		36.506	11.832	1	1125000			34225	1195	16872	16947	39921	39921					0.09251503999769284
TLFNVIKSV	9	Unmodified	_TLFNVIKSV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MSMS	GG20161007_CRH_Patient100_A02_02	2	510.8089172244072	2	510.808042	1019.60153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.619	1	58.945	58.445	59.445	0.32553								0	0	0	0.23225	1	24568	24568		23.79	10.282	1				34226	1195	16872	16947	39922	39922					0.09251503999769284
TLFNVIKSV	9	Unmodified	_TLFNVIKSV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8083373904228	2	510.808042	1019.60153	1.1791	0.00060228	-0.17195	-8.7832E-05	1.0071	0.00051445	510.8078723999531	57.33	0.35454	58.745	58.521	58.875	1.4145					22	12	2	0	0	0	0.019071	3	24032	23987;24032;24080		100.09	48.461	1	2754800			34227	1195	16872	16947	39923;39924;39925	39924					0.09251503999769284
TLFNVIKSV	9	Unmodified	_TLFNVIKSV_					0	0	0		ENSG00000096433|ENST00000605930|ITPR3;ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	ENSG00000096433|ENST00000605930|ITPR3	ENSG00000096433|ENST00000605930|ITPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8097717165947	2	510.808042	1019.60153	1.1891	0.00060743	1.5561	0.00079486	2.7452	0.0014023	510.8087853709549	56.674	0.32656	58.643	58.487	58.814	1.9684					22	10	3	0	0	0	0.034867	2	23758	23758;23811		80.676	34.976	1	2732500			34228	1195	16872	16947	39926;39927	39926					0.09251503999769284
TLFPASFSLL	10	Unmodified	_TLFPASFSLL_					0	0	0			REV__nc|ENSG00000196954|P49662-5|CASP4	REV__nc|ENSG00000196954|P49662-5|CASP4	MSMS	GG20161007_CRH_Patient100_A02_01	1	548.3074218630791	2	548.307875	1094.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.226	1	99.226	98.726	99.726	0								0	0	0	0.6607	1	41526	41526		3.2813	0.70383	1		+		34229	13713	16873	16948	39928	39928					0.05768084279907271
TLFPKDVQL	9	Unmodified	_TLFPKDVQL_					0	0	0		ENST00000472719.5_1_2:27008929-27016144:+|nuORF;nc|ENSG00000115163|P49450-2|CENPA;ENST00000419525.5_1_2:27015485-27016144:+|nuORF;ENST00000475662.5_1_2:26987167-27016144:+|nuORF;ENSG00000115163|ENST00000335756|CENPA	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	ENST00000472719.5_1_2:27008929-27016144:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8063232302666	2	530.8055	1059.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.088	1	53.411	52.911	53.911	0.32283								0	0	0	0.30476	1	22240	22240		18.146	1.0335	1				34230	1899	16874	16949	39929	39929					0.0690320013713972
TLFPRRIFL	9	Unmodified	_TLFPRRIFL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2400085330009	3	388.241359	1161.70225	1.0236	0.00039741	-0.64736	-0.00025133	0.37625	0.00014607	388.24047163078933	54.23	0.64482	55.635	55.35	55.995	1.4048					51	20	3	0	0	0	0.50272	1	22663	22663		15.248	0	1	3990500			34231	4351	16875	16950	39930	39930					0.12786580773263267
TLFPRRIFL	9	Unmodified	_TLFPRRIFL_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2402831912041	3	388.241359	1161.70225	0.7521	0.000292	-2.8093	-0.0010907	-2.0572	-0.00079868	388.23956521160045	53.683	0.61525	55.652	55.387	56.003	1.9697					39	19	3	0	0	0	0.42097	1	22492	22492		19.362	0.98885	1	4049400			34232	4351	16875	16950	39931	39931					0.12786580773263267
TLFPSKIGV	9	Unmodified	_TLFPSKIGV_					0	0	0		ENSG00000173542|ENST00000309395|MOB1B;ENSG00000114978|ENST00000396049|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF	ENSG00000173542|ENST00000309395|MOB1B	ENSG00000173542|ENST00000309395|MOB1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2908508181572	2	481.289485	960.564418	2.201	0.0010593	0.4649	0.00022375	2.6659	0.0012831	481.28980753156907	47.998	0.36851	49.975	49.806	50.175	1.9772					17	11	2	0	0	0	0.25667	1	20087	20087		27.629	7.1752	1	2023100			34233	1892	16876	16951	39932	39932					0.08255832453994572
TLFPSKIGV	9	Unmodified	_TLFPSKIGV_					0	0	0		ENSG00000173542|ENST00000309395|MOB1B;ENSG00000114978|ENST00000396049|MOB1A;nc|ENSG00000173542|Q7L9L4-2|MOB1B;ENST00000497054.5_1_2:74386211-74405801:-|nuORF	ENSG00000173542|ENST00000309395|MOB1B	ENSG00000173542|ENST00000309395|MOB1B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	481.289485	960.564418	1.4745	0.00070967	1.8176	0.00087481	3.2922	0.0015845	481.29050541870026	48.552	0.30524	49.94	49.774	50.079	1.388	-0.017243	0.00078631	NaN	27.629	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1755200			34234	1892	16876	16951							0.08255832453994572
TLFPVCMDCS	10	Unmodified	_TLFPVCMDCS_					0	0	0			REV__ZNF416|p.P437Hfs*90|1|0.04|ENSG00000083817|chr19:57572594-57572595|-/AGCTCCTGCAAGACACATAT|frameshift_variant	REV__ZNF416|p.P437Hfs*90|1|0.04|ENSG00000083817|chr19:57572594-57572595|-/AGCTCCTGCAAGACACATAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.2319213747978	2	558.232138	1114.44972	1.3358	0.00074569	1.5614	0.00087163	2.8972	0.0016173	558.2329985595252	75.57	0.28457	75.57	75.439	75.723	0					19	8	3	0	0	0	0.88022	1	31448	31448		3.5965	1.019	1	911470	+		34235	8834	16877	16952	39933	39933					-0.10292304406129915
TLFPVRLLV	9	Unmodified	_TLFPVRLLV_					0	0	0		ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3444091677666	2	529.342052	1056.66955	1.9113	0.0010118	2.1045	0.001114	4.0158	0.0021258	529.3433209895059	80.058	0.43439	80.058	79.887	80.321	0					30	13	3	0	0	0	0.30098	2	33370	33318;33370		25.399	4.7636	1	2988900			34236	3356	16878	16953	39934;39935	39935					0.14348373650409485
TLFPVRLLV	9	Unmodified	_TLFPVRLLV_					0	0	0		ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3446533083916	2	529.342052	1056.66955	1.9048	0.0010083	2.3035	0.0012193	4.2083	0.0022276	529.343617468054	79.466	0.44482	79.766	79.527	79.972	0.30047					33	13	3	0	0	0	0.17276	2	33231	33183;33231		36.127	11.489	1	3587000			34237	3356	16878	16953	39936;39937	39937					0.14348373650409485
TLFPVRLLV	9	Unmodified	_TLFPVRLLV_					0	0	0		ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3434936404228	2	529.342052	1056.66955	2.6395	0.0013972	0.16373	8.6667E-05	2.8033	0.0014839	529.3423218466681	78.384	0.43002	79.651	79.449	79.879	1.2668					32	13	3	0	0	0	0.079895	1	32909	32909		56.177	23.872	1	4521100			34238	3356	16878	16953	39938	39938					0.14348373650409485
TLFPVRLLV	9	Unmodified	_TLFPVRLLV_					0	0	0		ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	ENSG00000153395|ENST00000283415|LPCAT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	529.342052	1056.66955	1.7201	0.00091052	0.88008	0.00046586	2.6002	0.0013764	529.3424815884686	77.809	0.43312	79.561	79.407	79.84	1.7514	-0.19817	-0.00045846	NaN	56.177	38	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3729600			34239	3356	16878	16953							0.14348373650409485
TLFRMVATL	9	Unmodified	_TLFRMVATL_					0	0	0			REV__AOC2|p.F707*|1|0.13|ENSG00000131480|chr17:42850196-42850197|TT/-|frameshift_variant	REV__AOC2|p.F707*|1|0.13|ENSG00000131480|chr17:42850196-42850197|TT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.2652465701103	2	526.30207	1050.58959	2.2632	0.0011911	-0.082052	-4.3184E-05	2.1812	0.001148	526.3019465394497	44.366	0.18883	46.326	46.193	46.382	1.9596					8	5	2	0	0	0	0.11851	1	18582	18582		3.9444	0	1	284410	+		34240	8127	16879	16954	39939	39939					0.06631563984910827
TLFTKELVL	9	Unmodified	_TLFTKELVL_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ZFR-SND1|1|fusion;ENST00000470723.5_1_7:127589266-127648128:+|nuORF;ENST00000467238.1_1_7:127631037-127637644:+|nuORF	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	532.3248168826103	2	532.323525	1062.6325	2.2222	0.0011829	0.81617	0.00043447	3.0384	0.0016174	532.3237947569546	61.883	0.40952	61.883	61.645	62.055	0					32	12	3	0	0	0	0.081597	1	25791	25791		55.503	13.663	1	5663400			34241	4985	16880	16955	39940	39940					0.10368657313983931
TLFTKELVL	9	Unmodified	_TLFTKELVL_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ZFR-SND1|1|fusion;ENST00000470723.5_1_7:127589266-127648128:+|nuORF;ENST00000467238.1_1_7:127631037-127637644:+|nuORF	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3247558474541	2	532.323525	1062.6325	2.5536	0.0013593	-0.95592	-0.00050886	1.5976	0.00085046	532.3229613507932	60.015	0.47913	61.435	61.176	61.656	1.4196					44	15	4	0	0	0	0.032536	2	25124	25124;25227		83.429	22.071	1	16625000			34242	4985	16880	16955	39941;39942	39941					0.10368657313983931
TLFTKELVL	9	Unmodified	_TLFTKELVL_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ZFR-SND1|1|fusion;ENST00000470723.5_1_7:127589266-127648128:+|nuORF;ENST00000467238.1_1_7:127631037-127637644:+|nuORF	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3251220583916	2	532.323525	1062.6325	2.9975	0.0015956	-0.17226	-9.1699E-05	2.8252	0.0015039	532.3237584775205	59.481	0.57289	61.45	61.067	61.64	1.969					46	18	3	0	0	0	0.036104	1	24909	24909		79.596	25.764	1	16488000			34243	4985	16880	16955	39943	39943					0.10368657313983931
TLFTKELVL	9	Unmodified	_TLFTKELVL_					0	0	0		ENSG00000197157|ENST00000354725|SND1;ZFR-SND1|1|fusion;ENST00000470723.5_1_7:127589266-127648128:+|nuORF;ENST00000467238.1_1_7:127631037-127637644:+|nuORF	ENSG00000197157|ENST00000354725|SND1	ENSG00000197157|ENST00000354725|SND1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	532.323525	1062.6325	2.1812	0.0011611	1.2253	0.00065223	3.4065	0.0018134	532.3240760350718	61.222	0.43771	61.552	61.328	61.766	0.32974	-0.028015	0.00081112	NaN	83.429	37	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5173900			34244	4985	16880	16955							0.10368657313983931
TLFVGLWGL	9	Unmodified	_TLFVGLWGL_					0	0	0			REV__tr|A0A553SHX0|A0A553SHX0_NIACIL-lactatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_13745PE=3SV=1	REV__tr|A0A553SHX0|A0A553SHX0_NIACIL-lactatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_13745PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.2933532595634	2	503.292028	1004.5695	1.8743	0.00094333	0.28109	0.00014147	2.1554	0.0010848	503.29246690173994	75.825	0.22442	75.825	75.723	75.948	0					12	6	2	0	0	0	0.66839	1	31574	31574		8.5933	0	1	1120900	+		34245	14823	16881	16956	39944	39944					0.06740136316614098
TLFYILRSPPT	11	Unmodified	_TLFYILRSPPT_					0	0	0		ENST00000581230.5_1_17:62498125-62502378:-|nuORF;ENST00000585060.5_1_17:62500985-62502378:-|nuORF;ENST00000585223.1_1_17:62500698-62502378:-|nuORF	ENST00000581230.5_1_17:62498125-62502378:-|nuORF	ENST00000581230.5_1_17:62498125-62502378:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	654.1299316287041	2	654.371538	1306.72852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.199	1	97.484	96.984	97.984	0.28442								0	0	0	0.63772	1	40899	40899		9.3831	0	1				34246	7434	16882	16957	39945	39945					0.08742805154088273
TLGCHCLG	8	Unmodified	_TLGCHCLG_					0	0	0			REV__ENST00000409459.5_1_11:95569448-95571280:-|nuORF	REV__ENST00000409459.5_1_11:95569448-95571280:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1827575564384	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.674	1	96.076	95.576	96.576	0.40208								0	0	0	1.0178	1	40255	40255		2.5775	0	1		+		34247	12914	16883	16958	39946	39946					-0.06250004011758392
TLGCHCLG	8	Unmodified	_TLGCHCLG_					0	0	0			REV__ENST00000409459.5_1_11:95569448-95571280:-|nuORF	REV__ENST00000409459.5_1_11:95569448-95571280:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1825744509697	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.797	1	96.199	95.699	96.699	0.40208								0	0	0	1.0178	1	40304	40304		2.5775	0	1		+		34248	12914	16883	16958	39947	39947					-0.06250004011758392
TLGDEVLDF	9	Unmodified	_TLGDEVLDF_					0	0	0			REV__nc|ENSG00000104936|Q09013-12|DMPK	REV__nc|ENSG00000104936|Q09013-12|DMPK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1008.489978015423	1	1008.48842	1007.48114	1.726	0.0017407	0.68028	0.00068605	2.4063	0.0024268	1008.4892482267387	66.499	0.4173	66.499	66.285	66.703	0					27	12	3	0	0	0	0.12174	1	27656	27656		42.095	2.1372	1	1639600	+		34249	9158	16884	16959	39948	39948					-0.02229948784508906
TLGGLILFGFF	11	Unmodified	_TLGGLILFGFF_					0	0	0		tr|A0A553SFE6|A0A553SFE6_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08780PE=4SV=1	tr|A0A553SFE6|A0A553SFE6_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08780PE=4SV=1	tr|A0A553SFE6|A0A553SFE6_NIACIDUF624domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08780PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.5619384646416	3	395.561987	1183.66413	1.0149	0.00040146	-1.7499	-0.00069221	-0.73503	-0.00029075	395.56109883462864	52.6	0.75149	54.572	53.985	54.736	1.9722					47	23	3	0	0	0	0.96769	1	22027	22027		2.6312	0	1	2746000			34250	16052	16885	16960	39949	39949					0.07964650067947332
TLGGVTLTLL	10	Unmodified	_TLGGVTLTLL_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A;ATG2A-KLK10|1|fusion	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3083373904228	2	494.307875	986.601197	1.6051	0.00079343	0.086058	4.2539E-05	1.6912	0.00083597	494.30743496860015	58.006	0.25795	58.006	57.849	58.107	0					10	7	2	0	0	0	0.6819	1	24220	24220		19.257	1.1106	1	283500			34251	1690	16886	16961	39950	39950					0.10736084279915303
TLGGVTLTLL	10	Unmodified	_TLGGVTLTLL_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A;ATG2A-KLK10|1|fusion	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3070556521416	2	494.307875	986.601197	0.43776	0.00021639	0.37782	0.00018676	0.81558	0.00040315	494.3079802031596	56.283	0.32097	57.693	57.551	57.872	1.4099					16	10	2	0	0	0	0.22411	1	23586	23586		46.021	4.1813	1	2823800			34252	1690	16886	16961	39951	39951					0.10736084279915303
TLGGVTLTLL	10	Unmodified	_TLGGVTLTLL_					0	0	0		ENSG00000110046|ENST00000377264|ATG2A;nc|ENSG00000110046|Q2TAZ0-3|ATG2A;ATG2A-KLK10|1|fusion	ENSG00000110046|ENST00000377264|ATG2A	ENSG00000110046|ENST00000377264|ATG2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3087646365166	2	494.307875	986.601197	0.84395	0.00041717	0.068417	3.3819E-05	0.91236	0.00045099	494.307735329767	55.733	0.19941	57.701	57.641	57.841	1.9684					10	6	2	0	0	0	0.44465	1	23381	23381		30.637	3.0077	1	2226700			34253	1690	16886	16961	39952	39952					0.10736084279915303
TLGISLSQL	9	Unmodified	_TLGISLSQL_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.2779724001884	2	466.276575	930.538597	1.8795	0.00087638	0.5991	0.00027934	2.4786	0.0011557	466.2765378662006	67.48	0.37254	69.35	69.176	69.549	1.87					22	11	3	0	0	0	0.099302	1	28318	28318		64.236	5.5575	1	2408400			34254	5722	16887	16962	39953	39953					0.07054938211717854
TLGISLSQL	9	Unmodified	_TLGISLSQL_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	466.276575	930.538597	2.1111	0.00098435	4.4991	0.0020978	6.6101	0.0030822	466.2759347015276	69.167	0.28104	69.489	69.344	69.625	0.32224	-0.0019096	0.0030099	NaN	64.236	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	894970			34255	5722	16887	16962							0.07054938211717854
TLGISLSQL	9	Unmodified	_TLGISLSQL_					0	0	0		ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	ENST00000291232.4_2_22:42318247-42318586:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	466.276575	930.538597	2.3061	0.0010753	1.4356	0.00066937	3.7417	0.0017446	466.27663778561816	68.067	0.46133	69.444	69.213	69.675	1.3778	-0.0466	0.00015303	NaN	64.236	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2448000			34256	5722	16887	16962							0.07054938211717854
TLGLIWTI	8	Unmodified	_TLGLIWTI_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant;nc|ENSG00000151914|Q03001-14|DST;DST|p.E3356Afs*12|1|0.31|ENSG00000151914|chr6:56535225-56535226|-/CCAG|frameshift_variant;ENST00000521821.1_1_6:56535374-56707943:-|nuORF;ENST00000523967.5_1_6:56504020-56716372:-|nuORF;ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC;nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion	nc|ENSG00000151914|Q03001|DST;ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.5569335818291	1	916.550231	915.542954	3.9924	0.0036592	2.3254	0.0021314	6.3179	0.0057906	916.5523178108253	92.696	0.097542	93.608	93.547	93.645	0.91145					4	2	2	0	0	0	0.54738	1	39030	39030		44.407	3.9584	1	450860			34257	2341;1912;3306;4478	16888	16963	39954	39954					0.08180447425286275
TLGNVLVTV	9	Unmodified	_TLGNVLVTV_					0	0	0		nc|ENSG00000090989|Q9NV70-2|EXOC1;ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF	nc|ENSG00000090989|Q9NV70-2|EXOC1	nc|ENSG00000090989|Q9NV70-2|EXOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	915.5517455935478	1	915.550959	914.543683	2.1076	0.0019296	-0.12041	-0.00011024	1.9871	0.0018193	915.5507271526393	61.944	0.40845	61.944	61.709	62.118	0					20	12	2	0	0	0	0.0058174	2	25808	25808;25861		118.89	26.073	1	2550400			34258	1145	16889	16964	39955;39956	39955					0.08299242074349422
TLGNVLVTV	9	Unmodified	_TLGNVLVTV_					0	0	0		nc|ENSG00000090989|Q9NV70-2|EXOC1;ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF	nc|ENSG00000090989|Q9NV70-2|EXOC1	nc|ENSG00000090989|Q9NV70-2|EXOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	915.5541259646416	1	915.550959	914.543683	2.5402	0.0023257	1.3568	0.0012423	3.8971	0.003568	915.55172331361	60.241	0.45319	61.66	61.449	61.903	1.4196					27	14	2	0	0	0	0.0058174	1	25274	25274		118.89	26.073	1	8134300			34259	1145	16889	16964	39957	39957					0.08299242074349422
TLGNVLVTV	9	Unmodified	_TLGNVLVTV_					0	0	0		nc|ENSG00000090989|Q9NV70-2|EXOC1;ENSG00000090989|ENST00000381295|EXOC1;ENST00000511971.5_1_4:56749994-56766742:+|nuORF	nc|ENSG00000090989|Q9NV70-2|EXOC1	nc|ENSG00000090989|Q9NV70-2|EXOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	915.5536376833916	1	915.550959	914.543683	2.8575	0.0026162	1.323	0.0012113	4.1805	0.0038274	915.5511554375078	59.719	0.39651	61.688	61.522	61.918	1.969					24	12	2	0	0	0	0.0058174	1	25092	25092		118.89	26.403	1	6668500			34260	1145	16889	16964	39958	39958					0.08299242074349422
TLGPIFWLL	9	Unmodified	_TLGPIFWLL_					0	0	0		ENST00000592573.1_1_19:55556444-55559456:-|nuORF;ENST00000585492.1_1_19:55556444-55565151:-|nuORF;nc|ENSG00000160439|Q8NBN7-2|RDH13;ENSG00000160439|ENST00000415061|RDH13	ENST00000592573.1_1_19:55556444-55559456:-|nuORF	ENST00000592573.1_1_19:55556444-55559456:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	529.7960082888603	2	530.315503	1058.61645	1.8431	0.00097745	-3.5173	-0.0018653	-1.6742	-0.00088785	530.3137383871756	46.617	0.43346	47.992	47.681	48.115	1.3751					20	13	2	0	0	0	0.08828	1	19530	19530		28.487	11.545	1	697890			34261	3559	16890	16965	39959	39959					0.08948995867763188
TLHRRKLRLVR	11	Unmodified	_TLHRRKLRLVR_					0	0	0		ENST00000495593.1_1_1:18021396-18023872:+|nuORF	ENST00000495593.1_1_1:18021396-18023872:+|nuORF	ENST00000495593.1_1_1:18021396-18023872:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	724.4816772341728	2	724.47586	1446.93717	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.385	1	95.806	95.306	96.306	0.4212								0	0	0	0.63775	1	40141	40141		3.2813	3.2813	1				34262	6947	16891	16966	39960	39960					0.2315769130152603
TLHSIIISL	9	Unmodified	_TLHSIIISL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.8082458376884	2	498.808042	995.601532	1.8687	0.0009321	0.72675	0.00036251	2.5954	0.0012946	498.80794721716194	63.267	0.34788	63.267	63.081	63.429	0					15	10	2	0	0	0	0.11669	1	26370	26370		57.471	6.6163	1	637590			34263	4064	16892	16967	39961	39961					0.1035550399976728
TLHSIIISL	9	Unmodified	_TLHSIIISL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8080016970634	2	498.808042	995.601532	2.4947	0.0012444	0.96091	0.00047931	3.4556	0.0017237	498.80851158530186	62.617	0.31131	62.947	62.819	63.13	0.32974					15	9	2	0	0	0	0.16939	2	26222	26222;26273		48.346	6.2513	1	624920			34264	4064	16892	16967	39962;39963	39962					0.1035550399976728
TLHSIIISL	9	Unmodified	_TLHSIIISL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8096191287041	2	498.808042	995.601532	3.0025	0.0014976	0.69485	0.0003466	3.6973	0.0018442	498.80820237297326	61.367	0.36321	62.785	62.594	62.957	1.4177					23	11	3	0	0	0	0.040497	2	25710	25710;25763		85.357	7.3724	1	2357800			34265	4064	16892	16967	39964;39965	39964					0.1035550399976728
TLHSIIISL	9	Unmodified	_TLHSIIISL_					0	0	0		ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	ENSG00000169018|ENST00000306917|FEM1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8099548220634	2	498.808042	995.601532	2.8942	0.0014436	-0.0081342	-4.0574E-06	2.8861	0.0014396	498.80779879010134	60.799	0.30435	62.764	62.577	62.881	1.9653					19	9	3	0	0	0	0.033102	2	25488	25488;25541		92.822	18.399	1	1832800			34266	4064	16892	16967	39966;39967	39966					0.1035550399976728
TLIDAQWVL	9	Unmodified	_TLIDAQWVL_					0	0	0		nc|ENSG00000137747|Q9BYE2-4|TMPRSS13;TMPRSS13|p.P514Afs*5|1|0.16|ENSG00000137747|chr11:117903792-117903793|-/C|frameshift_variant;nc|ENSG00000137747|Q9BYE2-3|TMPRSS13;nc|ENSG00000137747|Q9BYE2-2|TMPRSS13;ENSG00000137747|ENST00000524993|TMPRSS13;nc|ENSG00000137747|Q9BYE2|TMPRSS13	nc|ENSG00000137747|Q9BYE2-4|TMPRSS13	nc|ENSG00000137747|Q9BYE2-4|TMPRSS13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7981445193291	2	529.797675	1057.5808	4.2029	0.0022267	-1.458	-0.00077247	2.7448	0.0014542	529.7968447240461	81.775	0.31204	83.462	83.25	83.562	1.6872					12	9	2	0	0	0	0.59203	1	34315	34315		11.64	3.047	1	589370			34267	2786	16893	16968	39968	39968					0.05430913620079991
TLIDAQWVL	9	Unmodified	_TLIDAQWVL_					0	0	0		nc|ENSG00000137747|Q9BYE2-4|TMPRSS13;TMPRSS13|p.P514Afs*5|1|0.16|ENSG00000137747|chr11:117903792-117903793|-/C|frameshift_variant;nc|ENSG00000137747|Q9BYE2-3|TMPRSS13;nc|ENSG00000137747|Q9BYE2-2|TMPRSS13;ENSG00000137747|ENST00000524993|TMPRSS13;nc|ENSG00000137747|Q9BYE2|TMPRSS13	nc|ENSG00000137747|Q9BYE2-4|TMPRSS13	nc|ENSG00000137747|Q9BYE2-4|TMPRSS13	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	529.797675	1057.5808	3.9761	0.0021065	0.74882	0.00039672	4.7249	0.0025032	529.7981398609171	82.196	0.31432	83.409	83.223	83.537	1.2125	-0.026479	0.0011905	NaN	11.64	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	808220			34268	2786	16893	16968							0.05430913620079991
TLIDLPGITKV	11	Unmodified	_TLIDLPGITKV_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2	nc|ENSG00000197959|Q9UQ16-5|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3615600466728	2	585.360639	1168.70673	1.7346	0.0010154	0.097816	5.7258E-05	1.8324	0.0010726	585.3606631774467	68.168	0.5069	68.168	67.883	68.39	0					45	15	4	0	0	0	0.0054879	3	28389	28339;28389;28440		111.31	51.941	1	4982100			34269	5033	16894	16969	39969;39970;39971	39970					0.12912000405481194
TLIDLPGITKV	11	Unmodified	_TLIDLPGITKV_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2	nc|ENSG00000197959|Q9UQ16-5|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3622314333916	2	585.360639	1168.70673	1.5916	0.00093167	0.68812	0.0004028	2.2797	0.0013345	585.3610234301157	67.644	0.47191	67.966	67.714	68.186	0.32269					45	14	4	0	0	0	0.0013356	4	28304	28256;28304;28356;28403		121.5	62.135	1	5992800			34270	5033	16894	16969	39972;39973;39974;39975	39973					0.12912000405481194
TLIDLPGITKV	11	Unmodified	_TLIDLPGITKV_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2	nc|ENSG00000197959|Q9UQ16-5|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3623535037041	2	585.360639	1168.70673	1.9205	0.0011242	0.24998	0.00014633	2.1705	0.0012705	585.360818147385	66.431	0.55047	67.82	67.507	68.057	1.3887					55	17	4	0	0	0	0.0039604	3	27848	27801;27848;27900		115.06	55.691	1	22246000			34271	5033	16894	16969	39976;39977;39978	39977					0.12912000405481194
TLIDLPGITKV	11	Unmodified	_TLIDLPGITKV_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2	nc|ENSG00000197959|Q9UQ16-5|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3618652224541	2	585.360639	1168.70673	1.7009	0.00099561	0.11662	6.8265E-05	1.8175	0.0010639	585.3606847355368	65.994	0.5536	67.902	67.616	68.169	1.9085					55	17	4	0	0	0	0.0054879	4	27701	27608;27652;27701;27746		111.31	51.941	1	22237000			34272	5033	16894	16969	39979;39980;39981;39982	39981					0.12912000405481194
TLIDLPGITRV	11	Unmodified	_TLIDLPGITRV_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;MX1|p.Y275Ifs*40|1|0.05|ENSG00000157601|chr21:41441807-41441808|-/ATAATGGGCCACACACAGTGGCTCAGTCCTA|frameshift_variant	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3647949099541	2	599.363713	1196.71287	1.9563	0.0011725	-0.43088	-0.00025825	1.5254	0.00091426	599.3634741210094	68.909	0.59083	68.909	68.612	69.202	0					64	18	5	0	0	0	0.0019837	4	28698	28614;28660;28698;28737		135.86	0	1	18123000			34273	3476	16895	16970	39983;39984;39985;39986	39985					0.1223851863701384
TLIDLPGITRV	11	Unmodified	_TLIDLPGITRV_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;MX1|p.Y275Ifs*40|1|0.05|ENSG00000157601|chr21:41441807-41441808|-/ATAATGGGCCACACACAGTGGCTCAGTCCTA|frameshift_variant	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3654052615166	2	599.363713	1196.71287	1.4587	0.00087427	0.66031	0.00039577	2.119	0.00127	599.3640883418526	68.376	0.62124	68.698	68.377	68.998	0.32224					63	19	5	0	0	0	0.0041895	5	28590	28540;28590;28639;28678;28726		135.86	0	1	18151000			34274	3476	16895	16970	39987;39988;39989;39990;39991	39988					0.1223851863701384
TLIDLPGITRV	11	Unmodified	_TLIDLPGITRV_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;MX1|p.Y275Ifs*40|1|0.05|ENSG00000157601|chr21:41441807-41441808|-/ATAATGGGCCACACACAGTGGCTCAGTCCTA|frameshift_variant	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3632690310478	2	599.363713	1196.71287	1.8583	0.0011138	-1.4813	-0.00088786	0.37697	0.00022594	599.3628430365051	67.159	0.55383	68.548	68.246	68.8	1.3888					62	17	5	0	0	0	0.0040191	4	28197	28101;28147;28197;28244		139.38	0	1	25074000			34275	3476	16895	16970	39992;39993;39994;39995	39994					0.1223851863701384
TLIDLPGITRV	11	Unmodified	_TLIDLPGITRV_					0	0	0		ENSG00000157601|ENST00000398598|MX1;nc|ENSG00000157601|P20591-2|MX1;MX1|p.Y275Ifs*40|1|0.05|ENSG00000157601|chr21:41441807-41441808|-/ATAATGGGCCACACACAGTGGCTCAGTCCTA|frameshift_variant	ENSG00000157601|ENST00000398598|MX1	ENSG00000157601|ENST00000398598|MX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3641235232353	2	599.363713	1196.71287	1.5253	0.00091422	-1.3685	-0.00082023	0.15681	9.3983E-05	599.3630760026675	66.673	0.48804	68.562	68.309	68.797	1.8889					50	15	4	0	0	0	0.0041895	3	28017	27915;27962;28017		114.5	0	1	21971000			34276	3476	16895	16970	39996;39997;39998	39998					0.1223851863701384
TLIDQHLFL	9	Unmodified	_TLIDQHLFL_					0	0	0			REV__ENSG00000206043|ENST00000579455|C18orf63	REV__ENSG00000206043|ENST00000579455|C18orf63	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	550.2187377810478	2	550.310949	1098.60735	1.8852	0.0010374	-3.5453	-0.001951	-1.6601	-0.00091359	550.3102547621617	64.41	0.25871	64.739	64.529	64.788	0.32899					12	7	2	0	0	0	0.11645	1	26952	26952		8.5933	0	1	570990	+		34277	11823	16896	16971	39999	39999					0.06198602511403806
TLIDQHLFL	9	Unmodified	_TLIDQHLFL_					0	0	0			REV__ENSG00000206043|ENST00000579455|C18orf63	REV__ENSG00000206043|ENST00000579455|C18orf63	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.310949	1098.60735	2.7411	0.0015085	-2.8106	-0.0015467	-0.069455	-3.8222E-05	550.308873397828	63.117	0.22148	64.53	64.344	64.566	1.4134	-0.033633	-0.0015051	NaN	8.5933	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1740900	+		34278	11823	16896	16971							0.06198602511403806
TLIDQHLFL	9	Unmodified	_TLIDQHLFL_					0	0	0			REV__ENSG00000206043|ENST00000579455|C18orf63	REV__ENSG00000206043|ENST00000579455|C18orf63	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	550.310949	1098.60735	2.8303	0.0015575	2.7313	0.001503	5.5615	0.0030606	550.3107345922652	62.478	0.24825	64.423	64.284	64.532	1.9444	-0.1416	0.0045944	NaN	8.5933	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1257100	+		34279	11823	16896	16971							0.06198602511403806
TLIDYASDI	9	Unmodified	_TLIDYASDI_					0	0	0		ENST00000568574.1_1_15:30926543-30927454:+|nuORF;nc|ENSG00000198826|Q6P4F7-2|ARHGAP11A;nc|ENSG00000198826|Q6P4F7-3|ARHGAP11A;ENSG00000198826|ENST00000361627|ARHGAP11A	ENST00000568574.1_1_15:30926543-30927454:+|nuORF	ENST00000568574.1_1_15:30926543-30927454:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7601806521416	2	505.755672	1009.49679	3.3419	0.0016902	2.3884	0.001208	5.7303	0.0028981	505.7569749171451	91.327	0.62191	92.693	92.374	92.996	1.366					52	19	4	0	0	0	0.3091	1	38380	38380		26.884	0	1	11587000			34280	5088	16897	16972	40000	40000					-0.007576622674832834
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.7846862673759	2	486.784233	971.553913	1.9611	0.00095465	-0.44501	-0.00021662	1.5161	0.00073802	486.7840770852523	92.788	1.3324	92.788	92.473	93.805	0					136	42	5	0	0	0	0.028763	10	38781	38684;38731;38781;38820;38860;38918;38971;39021;39073;39126		89.427	22.083	1	119430000			34281	1315	16898	16973	40001;40002;40003;40004;40005;40006;40007;40008;40009;40010	40003					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5615722537041	1	972.561189	971.553913	1.9477	0.0018943	-0.63217	-0.00061482	1.3155	0.0012794	972.5604898829354	92.798	0.69932	92.798	92.502	93.202	0					68	22	4	0	0	0	0.0045981	5	38807	38706;38756;38807;38846;38889		123.1	26.022	1	28642000			34282	1315	16898	16973	40011;40012;40013;40014;40015	40013					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.5608398318291	1	972.561189	971.553913	2.6851	0.0026114	-1.2641	-0.0012294	1.421	0.001382	972.5599241949787	92.468	0.6831	92.637	92.345	93.028	0.16835					59	21	4	0	0	0	0.0082953	5	38699	38651;38699;38749;38788;38833		109.63	24.273	1	35754000			34283	1315	16898	16973	40016;40017;40018;40019;40020	40017					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.7852355837822	2	486.784233	971.553913	3.4016	0.0016558	-1.9482	-0.00094834	1.4534	0.00070748	486.78332110089957	92.497	1.2018	92.665	92.281	93.483	0.16835					111	37	5	0	0	0	0.0082953	6	38762	38673;38723;38762;38802;38846;38897		109.63	24.273	1	76712000			34284	1315	16898	16973	40021;40022;40023;40024;40025;40026	40023					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7860595583916	2	486.784233	971.553913	4.2267	0.0020575	-1.738	-0.00084602	2.4887	0.0012115	486.7834953836597	91.755	1.6235	92.691	92.275	93.899	0.93623					140	50	5	0	0	0	0.01705	9	38556	38512;38556;38595;38634;38686;38726;38767;38890;38954		101.72	23.738	1	189110000			34285	1315	16898	16973	40027;40028;40029;40030;40031;40032;40033;40034;40035	40028					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.5637695193291	1	972.561189	971.553913	3.9039	0.0037967	-1.7031	-0.0016563	2.2008	0.0021404	972.5594887794206	91.644	0.67918	92.58	92.34	93.019	0.93624					70	21	4	0	0	0	0.0045981	4	38582	38533;38582;38635;38688		123.1	26.022	1	107400000			34286	1315	16898	16973	40036;40037;40038;40039	40037					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7858459353447	2	486.784233	971.553913	3.3523	0.0016318	-1.0075	-0.00049046	2.3447	0.0011414	486.7838464458988	91.248	1.2654	92.614	92.342	93.608	1.366					119	39	5	0	0	0	0.033521	10	38397	38351;38397;38436;38475;38527;38569;38612;38666;38718;38823		81.864	14.52	1	159320000			34287	1315	16898	16973	40040;40041;40042;40043;40044;40045;40046;40047;40048;40049	40041					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.5630370974541	1	972.561189	971.553913	3.1388	0.0030527	-0.82845	-0.00080572	2.3104	0.002247	972.5602950053978	91.275	0.78306	92.641	92.374	93.157	1.366					53	24	3	0	0	0	0.0045981	6	38449	38373;38410;38449;38501;38541;38599		123.1	26.022	1	127560000			34288	1315	16898	16973	40050;40051;40052;40053;40054;40055	40052					0.06699805008918247
TLIEDILGV	9	Unmodified	_TLIEDILGV_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	972.561189	971.553913	2.6889	0.0026151	0.16732	0.00016273	2.8562	0.0027778	972.5627948661212	92.939	0.16394	93.108	93.06	93.224	0.16835	0.15483	0.00073656	NaN	123.1	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338370			34289	1315	16898	16973							0.06699805008918247
TLIEELKTL	9	Unmodified	_TLIEELKTL_					0	0	0		ENSG00000123268|ENST00000262053|ATF1;nc|ENSG00000123268|P18846-2|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.3207275271416	2	530.31844	1058.62233	2.0195	0.001071	1.0541	0.00055901	3.0736	0.00163	530.3193405626963	62.94	0.28157	63.27	63.067	63.349	0.32974					12	8	2	0	0	0	0.33297	1	26350	26350		23.79	6.6769	1	695070			34290	2186	16899	16974	40056	40056					0.09536049588768947
TLIEELKTL	9	Unmodified	_TLIEELKTL_					0	0	0		ENSG00000123268|ENST00000262053|ATF1;nc|ENSG00000123268|P18846-2|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	530.31844	1058.62233	2.0899	0.0011083	1.9421	0.0010299	4.0319	0.0021382	530.319667047701	63.444	0.25201	63.444	63.304	63.556	0	0.20136	0.00011693	NaN	23.79	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517210			34291	2186	16899	16974							0.09536049588768947
TLIEELKTL	9	Unmodified	_TLIEELKTL_					0	0	0		ENSG00000123268|ENST00000262053|ATF1;nc|ENSG00000123268|P18846-2|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	530.31844	1058.62233	2.9609	0.0015702	1.662	0.0008814	4.6229	0.0024516	530.3195187109071	61.699	0.34371	63.117	62.927	63.27	1.4177	-0.12567	-0.00018012	NaN	23.79	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2270200			34292	2186	16899	16974							0.09536049588768947
TLIEELKTL	9	Unmodified	_TLIEELKTL_					0	0	0		ENSG00000123268|ENST00000262053|ATF1;nc|ENSG00000123268|P18846-2|ATF1	ENSG00000123268|ENST00000262053|ATF1	ENSG00000123268|ENST00000262053|ATF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	530.31844	1058.62233	2.5711	0.0013635	2.3001	0.0012198	4.8712	0.0025833	530.3198535889064	61.174	0.33936	63.139	62.942	63.282	1.9653	-0.10325	0.00049666	NaN	23.79	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2168700			34293	2186	16899	16974							0.09536049588768947
TLIEEMLYL	9	Unmodified	_TLIEEMLYL_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.8025390505791	2	562.799026	1123.5835	4.168	0.0023458	1.1981	0.00067429	5.3661	0.0030201	562.7997134376864	94.782	0.35496	95.523	95.358	95.713	0.74123					26	11	3	0	0	0	0.09539	2	39860	39860;39916		50.855	32.72	1	1543200			34294	621	16900	16975	40057;40058	40057					0.026650009627246618
TLIEEMLYL	9	Unmodified	_TLIEEMLYL_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.8007690310478	2	562.799026	1123.5835	3.2655	0.0018378	-0.28133	-0.00015833	2.9842	0.0016795	562.7989629509326	94.389	0.3157	95.577	95.367	95.682	1.1887					23	9	3	0	0	0	0.076627	2	39718	39660;39718		57.471	28.985	1	1615200			34295	621	16900	16975	40059;40060	40060					0.026650009627246618
TLIEEMLYL	9	Unmodified	_TLIEEMLYL_					0	0	0		nc|ENSG00000024048|Q8IWV8|UBR2;ENSG00000024048|ENST00000372901|UBR2;nc|ENSG00000024048|Q8IWV8-3|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	nc|ENSG00000024048|Q8IWV8|UBR2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	562.799026	1123.5835	1.2249	0.00068935	2.4883	0.0014004	3.7132	0.0020898	562.8006651809166	95.767	0.14164	95.767	95.662	95.803	0	0.14475	0.0015863	NaN	57.471	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404540			34296	621	16900	16975							0.026650009627246618
TLIGLSIKV	9	Unmodified	_TLIGLSIKV_					0	0	0		ENST00000569299.1_1_16:66967504-66968009:-|nuORF;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENSG00000166595|ENST00000422424|CIAO2B	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.3139831423759	2	472.312961	942.611368	2.7078	0.0012789	-0.47494	-0.00022432	2.2328	0.0010546	472.31254388232793	62.114	0.31339	62.114	61.96	62.274	0					22	9	3	0	0	0	0.22861	2	25871	25871;25925		29.841	11.694	1	1285300			34297	3913	16901	16976	40061;40062	40061					0.13776692005137647
TLIGLSIKV	9	Unmodified	_TLIGLSIKV_					0	0	0		ENST00000569299.1_1_16:66967504-66968009:-|nuORF;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENSG00000166595|ENST00000422424|CIAO2B	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.3160583376884	2	472.312961	942.611368	2.9996	0.0014168	0.8118	0.00038343	3.8114	0.0018002	472.3132834638184	60.283	0.52217	61.702	61.566	62.089	1.4196					34	16	3	0	0	0	0.036104	2	25264	25264;25313		79.596	18.239	1	6003800			34298	3913	16901	16976	40063;40064	40063					0.13776692005137647
TLIGLSIKV	9	Unmodified	_TLIGLSIKV_					0	0	0		ENST00000569299.1_1_16:66967504-66968009:-|nuORF;ENST00000562362.5_1_16:66966108-66968009:-|nuORF;ENSG00000166595|ENST00000422424|CIAO2B	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	ENST00000569299.1_1_16:66967504-66968009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.3145934939384	2	472.312961	942.611368	3.277	0.0015478	0.4435	0.00020947	3.7205	0.0017573	472.31290083698883	59.81	0.49508	61.779	61.582	62.077	1.969					33	15	3	0	0	0	0.036104	1	25106	25106		79.596	21.874	1	4446400			34299	3913	16901	16976	40065	40065					0.13776692005137647
TLIKVKPL	8	Unmodified	_TLIKVKPL_					0	0	0			REV__ENST00000521851.1_1_8:101487919-101488048:+|nuORF	REV__ENST00000521851.1_1_8:101487919-101488048:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7825500369072	2	456.318046	910.621539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.493	1	99.69	99.19	100.19	0.19767								0	0	0	1.0178	1	41884	41884		0.52476	0	1		+		34300	13634	16902	16977	40066	40066					0.16265299730378047
TLILARMH	8	Unmodified	_TLILARMH_					0	0	0			REV__tr|A0A553SQU6|A0A553SQU6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07230PE=4SV=1	REV__tr|A0A553SQU6|A0A553SQU6_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07230PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1554443240166	3	318.856629	953.548056	0.23985	7.6476E-05	1.0585	0.0003375	1.2983	0.00041398	318.856809430356	26.227	0.15105	26.488	26.384	26.535	0.26173					6	4	2	0	0	0	2.3239	1	10939	10939		0.45834	0	1	288580	+		34301	15136	16903	16978	40067	40067					0.06942428016259328
TLILMFAW	8	Unmodified	_TLILMFAW_					0	0	0		ENSG00000146477|ENST00000275300|SLC22A3	ENSG00000146477|ENST00000275300|SLC22A3	ENSG00000146477|ENST00000275300|SLC22A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7768737673759	2	497.775157	993.53576	4.121	0.0020513	-3.361	-0.001673	0.76004	0.00037833	497.7734227872369	91.729	0.74245	92.665	92.34	93.082	0.93623					67	23	4	0	0	0	0.52797	1	38691	38691		45.75	3.6554	1	25281000			34302	3156	16904	16979	40068	40068					0.038733915532020546
TLILRDCII	9	Unmodified	_TLILRDCII_					0	0	0		ENST00000417811.2_3_7:32718693-32763129:-|nuORF	ENST00000417811.2_3_7:32718693-32763129:-|nuORF	ENST00000417811.2_3_7:32718693-32763129:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	529.8147460818291	2	530.315177	1058.6158	1.4863	0.00078819	-1.4212	-0.00075368	0.06507	3.4508E-05	530.3157294962384	46.129	0.36643	48.1	47.821	48.188	1.9703					18	11	2	0	0	0	0.091909	1	19289	19289		26.884	3.7352	1	725770			34303	6420	16905	16980	40069	40069					0.08883833156392029
TLIMPTLRIL	10	Unmodified	_TLIMPTLRIL_					0	0	0		ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	ENST00000463593.6_1_9:95060120-95060712:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.8711425662041	2	585.867577	1169.7206	3.1402	0.0018397	2.121	0.0012426	5.2612	0.0030824	585.8684660029035	107.47	0.21008	107.63	107.51	107.72	0.15781					30	10	4	0	0	0	0.88314	1	46205	46205		3.2813	0.28607	1	127260000			34304	6686	16906	16981	40070	40070					0.1425295463295697
TLIPCHQGCL	10	Unmodified	_TLIPCHQGCL_					0	0	0			REV__ENSG00000104237|ENST00000220676|RP1	REV__ENSG00000104237|ENST00000220676|RP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.2958862185478	2	542.767537	1083.52052	2.9624	0.0016079	-3.6272	-0.0019687	-0.66475	-0.00036081	542.7660312899716	73.778	0.33929	75.575	75.409	75.748	1.7962					16	10	2	0	0	0	0.12302	1	31013	31013		32.305	9.1571	1	1674400	+		34305	9129	16907	16982	40071	40071					-0.01789843306301009
TLIPCHQGCL	10	Unmodified	_TLIPCHQGCL_					0	0	0			REV__ENSG00000104237|ENST00000220676|RP1	REV__ENSG00000104237|ENST00000220676|RP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	542.767537	1083.52052	2.5286	0.0013724	-0.38778	-0.00021048	2.1408	0.0011619	542.767321389623	75.188	0.2543	75.512	75.329	75.584	0.32464	-0.031182	0.0010097	NaN	32.305	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	314860	+		34306	9129	16907	16982							-0.01789843306301009
TLIRTKGRRP	10	Unmodified	_TLIRTKGRRP_					0	0	0		ENST00000494016.1_1_11:61172069-61173437:-|nuORF	ENST00000494016.1_1_11:61172069-61173437:-|nuORF	ENST00000494016.1_1_11:61172069-61173437:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.9229919314384	3	399.922801	1196.74657	0.7157	0.00028623	-0.039625	-1.5847E-05	0.67608	0.00027038	399.92276638935374	90.453	0.48957	90.453	90.193	90.682	0					62	15	5	0	0	0	0.88314	1	37747	37747		1.5923	0.66675	1	18960000			34307	6932	16908	16983	40072	40072					0.15606984919463684
TLISDIEAV	9	Unmodified	_TLISDIEAV_					0	0	0		ENST00000265450.5_1_10:82275833-82277729:+|nuORF;nc|ENSG00000108219|Q8NG11-3|TSPAN14;nc|ENSG00000108219|Q8NG11-2|TSPAN14;ENSG00000108219|ENST00000429989|TSPAN14	ENST00000265450.5_1_10:82275833-82277729:+|nuORF	ENST00000265450.5_1_10:82275833-82277729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.7664062380791	2	480.76604	959.517527	2.6785	0.0012878	-1.0843	-0.00052128	1.5943	0.00076647	480.76524551065455	66.692	0.31178	67.016	66.939	67.25	0.32449					12	9	2	0	0	0	0.24063	1	27928	27928		28.487	0	1	655260			34308	1625	16909	16984	40073	40073					0.03614928112187954
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2825805544853	2	487.281857	972.549162	1.5229	0.00074207	0.085722	4.1771E-05	1.6086	0.00078384	487.28191523598116	69.903	0.50792	69.903	69.579	70.087	0					38	15	4	0	0	0	0.026628	4	29114	29027;29076;29114;29160		92.822	35.592	1	5695100			34309	669	16910	16985	40074;40075;40076;40077	40076					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	973.5587036013603	1	973.556438	972.549162	1.529	0.0014886	-0.67076	-0.00065302	0.85822	0.00083553	973.5572496488127	69.913	0.34923	69.913	69.675	70.024	0					18	10	2	0	0	0	0.026628	1	29104	29104		92.822	21.689	1	1371500			34310	669	16910	16985	40078	40078					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2829162478447	2	487.281857	972.549162	2.1126	0.0010294	0.18192	8.8647E-05	2.2945	0.0011181	487.28190785174934	69.382	0.59547	69.704	69.438	70.034	0.32224					44	18	4	0	0	0	0.013238	4	29055	28969;29018;29055;29100		104.8	40.563	1	7497300			34311	669	16910	16985	40079;40080;40081;40082	40081					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	973.5596801638603	1	973.556438	972.549162	1.4112	0.0013738	-0.088829	-8.648E-05	1.3223	0.0012874	973.5567318378786	69.319	0.34673	69.641	69.532	69.878	0.32224					14	10	2	0	0	0	0.033794	1	29014	29014		81.613	17.377	1	1302500			34312	669	16910	16985	40083	40083					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2829162478447	2	487.281857	972.549162	2.2814	0.0011117	0.81208	0.00039571	3.0935	0.0015074	487.2822068711755	68.313	0.58397	69.691	69.394	69.978	1.3778					61	18	5	0	0	0	0.026628	3	28641	28602;28641;28691		92.822	31.465	1	27077000			34313	669	16910	16985	40084;40085;40086	40085					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	973.5583984255791	1	973.556438	972.549162	2.0477	0.0019935	0.67324	0.00065544	2.7209	0.002649	973.5570444732347	68.339	0.40089	69.717	69.427	69.828	1.3778					27	12	3	0	0	0	0.013238	2	28623	28623;28669		104.8	33.666	1	4754000			34314	669	16910	16985	40087;40088	40087					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2824584841728	2	487.281857	972.549162	1.9035	0.00092756	-0.012119	-5.9052E-06	1.8914	0.00092165	487.2818344486966	67.695	0.5868	69.565	69.362	69.949	1.87					51	18	4	0	0	0	0.026628	4	28390	28345;28390;28429;28468		92.822	35.351	1	18001000			34315	669	16910	16985	40089;40090;40091;40092	40090					0.06178920866148019
TLISELVQA	9	Unmodified	_TLISELVQA_					0	0	0		ENSG00000044090|ENST00000265348|CUL7;nc|ENSG00000044090|Q14999-2|CUL7	ENSG00000044090|ENST00000265348|CUL7	ENSG00000044090|ENST00000265348|CUL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	973.5587646365166	1	973.556438	972.549162	1.6851	0.0016405	0.33278	0.00032398	2.0179	0.0019645	973.5567040119228	67.749	0.43311	69.619	69.394	69.827	1.87					30	13	3	0	0	0	0.026628	2	28394	28394;28448		92.822	21.689	1	2592300			34316	669	16910	16985	40093;40094	40093					0.06178920866148019
TLIYLIFY	8	Unmodified	_TLIYLIFY_					0	0	0			REV__tr|A0A7D6ZH22|A0A7D6ZH22_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01150PE=4SV=1	REV__tr|A0A7D6ZH22|A0A7D6ZH22_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3056518435478	2	523.302062	1044.58957	3.0826	0.0016132	4.0167	0.002102	7.0994	0.0037151	523.3037007229581	70.837	1.1363	72.19	71.147	72.284	1.3536					58	35	3	0	0	0	0.87803	1	29637	29637		10.183	4.423	1	2576700	+		34317	15644	16911	16986	40095	40095					0.06905887256561982
TLIYTTASI	9	Unmodified	_TLIYTTASI_					0	0	0			REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7748596072197	2	491.776408	981.538263	1.7047	0.00083831	-3.4388	-0.0016911	-1.7341	-0.00085281	491.7742528113553	71.787	0.37477	73.129	72.967	73.342	1.3415					20	11	2	0	0	0	0.12174	1	30155	30155		42.095	6.0504	1	1845100	+		34318	12570	16912	16987	40096	40096					0.046755184918424675
TLIYTTASI	9	Unmodified	_TLIYTTASI_					0	0	0			REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7731811404228	2	491.776408	981.538263	1.7741	0.00087244	-4.0021	-0.0019681	-2.2281	-0.0010957	491.77403539652903	71.32	0.40875	73.144	72.972	73.381	1.824					20	12	2	0	0	0	0.10294	1	29934	29934		48.346	12.302	1	1553200	+		34319	12570	16912	16987	40097	40097					0.046755184918424675
TLIYTTASI	9	Unmodified	_TLIYTTASI_					0	0	0			REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	491.776408	981.538263	1.5401	0.00075738	-1.3318	-0.00065493	0.20832	0.00010245	491.7749074939294	73.343	0.12286	73.343	73.28	73.403	0	0.13804	0.0021178	NaN	48.346	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487350	+		34320	12570	16912	16987							0.046755184918424675
TLIYTTASI	9	Unmodified	_TLIYTTASI_					0	0	0			REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	REV__ENST00000358273.8_2_17:29701813-29701876:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	491.776408	981.538263	1.7741	0.00087244	-4.0021	-0.0019681	-2.2281	-0.0010957	491.77403539652903	71.32	0.40875	73.144	72.972	73.381	1.824	-0.061474	-0.0005086	NaN	48.346	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1553200	+		34321	12570	16912	16987							0.046755184918424675
TLKDLDVAL	9	Unmodified	_TLKDLDVAL_					0	0	0		nc|ENSG00000203705|Q17R31-5|TATDN3;nc|ENSG00000203705|Q17R31-2|TATDN3;ENSG00000203705|ENST00000366974|TATDN3;nc|ENSG00000203705|Q17R31-3|TATDN3	nc|ENSG00000203705|Q17R31-5|TATDN3	nc|ENSG00000203705|Q17R31-5|TATDN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2917053103447	2	494.289682	986.564812	1.8595	0.00091913	1.0887	0.00053815	2.9482	0.0014573	494.29023475355007	45.016	0.31618	46.975	46.799	47.115	1.9596					16	9	2	0	0	0	0.35391	1	18842	18842		22.736	0	1	1438000			34322	5113	16913	16988	40098	40098					0.07099207383191697
TLKKKMGK	8	Unmodified	_TLKKKMGK_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.3005554080009	2	467.29933	932.584108	2.2163	0.0010357	0.78684	0.00036769	3.0031	0.0014034	467.2996901108078	76.33	0.6756	76.33	75.98	76.656	0					77	21	5	0	0	0	0.89178	2	31764	31764;31817		0.69038	0	1	233310000			34323	3359	16914	16989	40099;40100	40099					0.11511885193112903
TLKKKMGK	8	Unmodified	_TLKKKMGK_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.3013183474541	2	467.29933	932.584108	2.9913	0.0013978	0.54364	0.00025404	3.535	0.0016519	467.2996017943399	76.121	1.1837	76.443	76.144	77.328	0.32163					98	37	5	0	0	0	0.89178	1	31901	31901		0.69038	0	1	281640000			34324	3359	16914	16989	40101	40101					0.11511885193112903
TLKKKMGK	8	Unmodified	_TLKKKMGK_					0	0	0		ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	ENSG00000153531|ENST00000612156|ADPRHL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.3018066287041	2	467.29933	932.584108	3.1212	0.0014585	2.6925	0.0012582	5.8137	0.0027168	467.3005042831427	74.842	0.71452	76.624	76.389	77.103	1.7817					69	22	5	0	0	0	0.89178	3	31394	31394;31446;31485		0.69038	0	1	81206000			34325	3359	16914	16989	40102;40103;40104	40102					0.11511885193112903
TLKKLLLN	8	Unmodified	_TLKKLLLN_					0	0	0		SUPT6H|p.F839L|1|0.08|ENSG00000109111|chr17:28686366-28686366|T/C|missense_variant	SUPT6H|p.F839L|1|0.08|ENSG00000109111|chr17:28686366-28686366|T/C|missense_variant	SUPT6H|p.F839L|1|0.08|ENSG00000109111|chr17:28686366-28686366|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.8245727419853	2	471.820953	941.627353	3.4914	0.0016473	3.5766	0.0016875	7.068	0.0033348	471.82282846278713	109.61	0.72376	109.66	109.38	110.11	0.048851					59	26	3	0	0	0	0.89181	2	47291	47291;47353		0.6015	0	1	8621600			34326	16010	16915	16990	40105;40106	40105					0.15420398242042666
TLKKNKVTHI	10	Unmodified	_TLKKNKVTHI_					0	0	0		ENSG00000162999|ENST00000354221|DUSP19	ENSG00000162999|ENST00000354221|DUSP19	ENSG00000162999|ENST00000354221|DUSP19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.5847045779228	3	394.583674	1180.72919	2.0105	0.00079329	3.4087	0.001345	5.4191	0.0021383	394.58521372633635	59.982	0.57207	61.402	61.176	61.748	1.4196					33	18	2	0	0	0	0.86043	1	25166	25166		3.0723	0	1	1197800			34327	3656	16916	16991	40107	40107					0.14605644593802936
TLKLYACSSL	10	Unmodified	_TLKLYACSSL_					0	0	0		ENST00000533108.1_1_8:145164641-145165891:+|nuORF;nc|ENSG00000179698|A6NE52-2|WDR97;ENSG00000179698|ENST00000323662|WDR97	ENST00000533108.1_1_8:145164641-145165891:+|nuORF	ENST00000533108.1_1_8:145164641-145165891:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2174560427666	2	549.796817	1097.57908	1.283	0.00070539	4.0453	0.0022241	5.3283	0.0029295	549.7991314207117	71.165	0.22171	71.165	71.035	71.257	0					10	6	2	0	0	0	0.12525	1	29603	29603		3.5965	1.5367	1	440650			34328	4522	16917	16992	40108	40108					0.03419536539809087
TLKLYACSSL	10	Unmodified	_TLKLYACSSL_					0	0	0		ENST00000533108.1_1_8:145164641-145165891:+|nuORF;nc|ENSG00000179698|A6NE52-2|WDR97;ENSG00000179698|ENST00000323662|WDR97	ENST00000533108.1_1_8:145164641-145165891:+|nuORF	ENST00000533108.1_1_8:145164641-145165891:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	549.796817	1097.57908	1.3315	0.00073207	4.8246	0.0026526	6.1561	0.0033846	549.7994465054294	70.565	0.31131	70.887	70.737	71.048	0.32224	-0.13892	0.00056225	NaN	3.5965	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625500			34329	4522	16917	16992							0.03419536539809087
TLKMSVKKM	9	Unmodified	_TLKMSVKKM_					0	0	0			REV__ENST00000283351.8_1_18:29435759-29437626:-|nuORF	REV__ENST00000283351.8_1_18:29435759-29437626:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1912719607353	2	533.31158	1064.60861	1.701	0.00090718	-4.361	-0.0023257	-2.6599	-0.0014186	533.3083505424638	50.688	0.33244	52.081	51.924	52.257	1.3938					14	10	2	0	0	0	0.11518	1	21269	21269		3.9444	1.3669	1	668130	+		34330	12264	16918	16993	40109	40109					0.07888777284324533
TLKNKKTT	8	Unmodified	_TLKNKKTT_					0	0	0			REV__tr|A0A553STM6|A0A553STM6_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05440PE=3SV=1	REV__tr|A0A553STM6|A0A553STM6_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05440PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	933.5765258669853	1	933.572757	932.565481	1.1487	0.0010724	1.9397	0.0018109	3.0884	0.0028832	933.5741923720557	107.78	0.17738	107.78	107.65	107.82	0					30	9	4	0	0	0	0.89008	1	46245	46245		2.5775	0	1	275420000	+		34331	15246	16919	16994	40110	40110					0.09650046822901004
TLKNKSSKKSS	11	Unmodified	_TLKNKSSKKSS_					0	0	0		nc|ENSG00000084093|Q13127-4|REST;ENSG00000084093|ENST00000309042|REST	nc|ENSG00000084093|Q13127-4|REST	nc|ENSG00000084093|Q13127-4|REST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3588134646416	2	604.353877	1206.6932	3.7787	0.0022837	3.3812	0.0020435	7.1599	0.0043271	604.3561833788876	86.024	0.48603	87.571	87.203	87.69	1.547					50	19	3	0	0	0	1.0214	1	36257	36257		2.4985	0	1	57504000			34332	1048	16920	16995	40111	40111					0.09812142626287823
TLKPRVFLHL	10	Unmodified	_TLKPRVFLHL_					0	0	0		ENSG00000140955|ENST00000315906|ADAD2;nc|ENSG00000140955|Q8NCV1-2|ADAD2	ENSG00000140955|ENST00000315906|ADAD2	ENSG00000140955|ENST00000315906|ADAD2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0762206912041	4	306.69603	1222.75501	-2.6936	-0.00082612	-4.2903	-0.0013158	-6.9839	-0.0021419	306.69458697233944	30.88	0.27365	30.88	30.805	31.079	0					14	8	2	0	0	0	0.12561	1	12977	12977		0.15932	0	1	398530			34333	2942	16921	16996	40112	40112					0.1525453883607497
TLKRKKKKL	9	Unmodified	_TLKRKKKKL_					0	0	0			REV__ERCC4|p.Y577*|1|0.08|ENSG00000175595|chr16:13935663-13935663|C/-|frameshift_variant	REV__ERCC4|p.Y577*|1|0.08|ENSG00000175595|chr16:13935663-13935663|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.9072753787041	2	571.908425	1141.8023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.727	1	53.727	53.227	54.227	0								0	0	0	0.42693	1	22400	22400		0.6015	0	1		+		34334	11157	16922	16997	40113	40113					0.23706818107075378
TLKRLVSRRLK	11	Unmodified	_TLKRLVSRRLK_					0	0	0		ENSG00000186150|ENST00000334179|UBL4B	ENSG00000186150|ENST00000334179|UBL4B	ENSG00000186150|ENST00000334179|UBL4B	MSMS	GG20161007_CRH_Patient100_W632_01	3	685.4614135622978	2	685.459345	1368.90414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.57	1	116.76	116.26	117.26	0.19572								0	0	0	0.63775	1	50439	50439		1.3295	0	1				34335	4779	16923	16998	40114	40114					0.23444064458817593
TLKRWNEL	8	Unmodified	_TLKRWNEL_					0	0	0		tr|A0A553SG94|A0A553SG94_NIACIRibonucleaseOS=NialliacirculansOX=1397GN=CEQ21_10375PE=4SV=1	tr|A0A553SG94|A0A553SG94_NIACIRibonucleaseOS=NialliacirculansOX=1397GN=CEQ21_10375PE=4SV=1	tr|A0A553SG94|A0A553SG94_NIACIRibonucleaseOS=NialliacirculansOX=1397GN=CEQ21_10375PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8079711794853	2	530.300916	1058.58728	2.3943	0.0012697	3.6898	0.0019567	6.0841	0.0032264	530.8060265139845	80.755	0.4307	82.451	82.241	82.671	1.6959					41	13	4	0	0	0	0.76103	1	33948	33948		24.674	2.9272	1	5566700			34336	16101	16924	16999	40115	40115					0.0603285157146729
TLKTKLGIV	9	Unmodified	_TLKTKLGIV_					0	0	0		ENST00000477983.1_1_7:156526850-156555826:-|nuORF	ENST00000477983.1_1_7:156526850-156555826:-|nuORF	ENST00000477983.1_1_7:156526850-156555826:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.6456786990166	1	972.645194	971.637917	3.0154	0.002933	-2.1859	-0.0021261	0.82958	0.00080688	972.6428295287297	107.66	0.24231	107.82	107.66	107.9	0.15796					47	12	5	0	0	0	0.84963	1	46328	46328		0.6015	0	1	1758699999.9999998			34337	6796	16925	17000	40116	40116					0.15096380896454775
TLKVRRRH	8	Unmodified	_TLKVRRRH_					0	0	0		ENST00000592895.5_1_19:1987398-1987842:-|nuORF	ENST00000592895.5_1_19:1987398-1987842:-|nuORF	ENST00000592895.5_1_19:1987398-1987842:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.3420287966728	2	533.341241	1064.66793	2.5007	0.0013337	-2.4796	-0.0013225	0.021147	1.1279E-05	533.3399740136356	83.791	0.99835	84.061	83.77	84.768	0.27029					89	31	5	0	0	0	0.89178	1	35007	35007		0.69038	0.088878	1	165320000			34338	7497	16926	17001	40117	40117					0.1381817740502811
TLLAAEFLKQV	11	Unmodified	_TLLAAEFLKQV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8675414919853	2	616.866089	1231.71762	2.1451	0.0013232	-0.33234	-0.00020501	1.8128	0.0011182	616.8659310108831	72.209	0.31183	73.539	73.361	73.672	1.3298					20	9	3	0	0	0	0.0054879	1	30299	30299		111.31	74.803	1	1110900			34339	2678	16927	17002	40118	40118					0.1110340277978139
TLLAAEFLKQV	11	Unmodified	_TLLAAEFLKQV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8695556521416	2	616.866089	1231.71762	2.0444	0.0012611	-1.882	-0.001161	0.16231	0.00010012	616.8651295804167	71.679	0.43382	73.503	73.381	73.815	1.824					19	13	2	0	0	0	0.025924	1	30091	30091		94.909	51.05	1	899200			34340	2678	16927	17002	40119	40119					0.1110340277978139
TLLAAEFLKQV	11	Unmodified	_TLLAAEFLKQV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	616.866089	1231.71762	2.1177	0.0013063	0.60915	0.00037576	2.7268	0.0016821	616.8670961659841	73.916	0.25021	73.916	73.764	74.014	0	0.25765	0.0019031	NaN	111.31	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410330			34341	2678	16927	17002							0.1110340277978139
TLLAAEFLKQV	11	Unmodified	_TLLAAEFLKQV_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	616.866089	1231.71762	2.1483	0.0013252	-1.4686	-0.00090594	0.67972	0.0004193	616.8652125620206	73.35	0.20736	73.675	73.577	73.784	0.32494	0.016743	-0.00066033	NaN	111.31	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	575320			34342	2678	16927	17002							0.1110340277978139
TLLAKHWKLL	10	Unmodified	_TLLAKHWKLL_					0	0	0		ENSG00000167700|ENST00000301327|MFSD3	ENSG00000167700|ENST00000301327|MFSD3	ENSG00000167700|ENST00000301327|MFSD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	307.2311279177666	4	306.447217	1221.75976	-0.03686	-1.1296E-05	1.1142	0.00034145	1.0774	0.00033016	306.6979593726007	22.984	0.33998	24.198	24.04	24.38	1.2145					14	10	2	0	0	0	0.12559	1	9617	9617		0.15932	0	1	238190			34343	3987	16928	17003	40120	40120					0.157754229788452
TLLALARLWRR	11	Unmodified	_TLLALARLWRR_					0	0	0			REV__ENSG00000121281|ENST00000673801|ADCY7	REV__ENSG00000121281|ENST00000673801|ADCY7	MSMS	GG20161007_CRH_Patient100_W632_01	3	684.9319946169853	2	684.932963	1367.85137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.43	1	114.6	114.1	115.1	0.17579								0	0	0	0.63775	1	49581	49581		1.3295	0	1		+		34344	9584	16929	17004	40121	40121					0.18216106396016585
TLLCRQYN	8	Unmodified	_TLLCRQYN_					0	0	0			REV__ENSG00000198677|ENST00000358746|SKIC3	REV__ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.7588073611259	2	505.758027	1009.5015	2.1304	0.0010775	-0.9803	-0.00049579	1.1501	0.0005817	505.7574611634617	92.788	0.57346	92.788	92.502	93.076	0					41	18	3	0	0	0	0.87065	1	38713	38713		8.5933	3.8373	1	5493600	+		34345	11723	16930	17005	40122	40122					-0.0028705660570267355
TLLDELEKKK	10	Unmodified	_TLLDELEKKK_					0	0	0		DMD|p.S1705L|1|0.17|ENSG00000198947|chrX:32364622-32364622|G/A|missense_variant	DMD|p.S1705L|1|0.17|ENSG00000198947|chrX:32364622-32364622|G/A|missense_variant	DMD|p.S1705L|1|0.17|ENSG00000198947|chrX:32364622-32364622|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2432433962822	3	406.243094	1215.70745	0.34456	0.00013997	1.6639	0.00067593	2.0084	0.0008159	406.24381148676605	40.596	0.30387	40.596	40.427	40.731	0					22	9	3	0	0	0	0.55653	1	17026	17026		21.799	2.6555	1	2831300			34346	411	16931	17006	40123	40123					0.1082279505455972
TLLDFINAV	9	Unmodified	_TLLDFINAV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1005.566149890423	1	1005.56152	1004.55425	2.8965	0.0029127	1.3795	0.0013872	4.276	0.0042998	1005.5636439682728	91.536	0.25779	91.726	91.594	91.852	0.19041					10	7	2	0	0	0	0.091139	1	38356	38356		52.268	16.224	1	600100			34347	7647	16932	17007	40124	40124					0.05215224728760859
TLLDFINAV	9	Unmodified	_TLLDFINAV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2861511111259	2	503.2844	1004.55425	3.7371	0.0018808	-0.91293	-0.00045946	2.8241	0.0014213	503.2839373705215	90.385	0.29121	91.751	91.638	91.929	1.366					22	8	3	0	0	0	0.076627	2	38076	38076;38131		57.471	3.8958	1	1928200			34348	7647	16932	17007	40125;40126	40125					0.05215224728760859
TLLDFINAV	9	Unmodified	_TLLDFINAV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	503.2844	1004.55425	2.1215	0.0010677	-0.75842	-0.0003817	1.363	0.000686	503.2845252815169	91.803	0.34681	91.803	91.693	92.04	0	0.027435	-0.00025805	NaN	57.471	15	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303780			34349	7647	16932	17007							0.05215224728760859
TLLDFINAV	9	Unmodified	_TLLDFINAV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	503.2844	1004.55425	3.1189	0.0015697	-1.458	-0.0007338	1.6609	0.00083592	503.28322825347215	91.611	0.25779	91.802	91.594	91.852	0.19042	0.025807	-0.00096226	NaN	57.471	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	366700			34350	7647	16932	17007							0.05215224728760859
TLLDFINAV	9	Unmodified	_TLLDFINAV_					0	0	0		HEXB-UBA6|1|fusion;nc|ENSG00000033178|A0AVT1-2|UBA6;ENSG00000033178|ENST00000322244|UBA6	HEXB-UBA6|1|fusion	HEXB-UBA6|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	503.2844	1004.55425	4.2895	0.0021589	2.1842	0.0010993	6.4737	0.0032581	503.2860446078869	90.766	0.32061	91.748	91.622	91.942	0.98156	-0.02853	0.0027039	NaN	57.471	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	695800			34351	7647	16932	17007							0.05215224728760859
TLLDPNEKYLL	11	Unmodified	_TLLDPNEKYLL_					0	0	0		ENST00000478009.1_1_1:202935608-202936333:-|nuORF;ENSG00000159348|ENST00000367249|CYB5R1	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	660.3696166872978	2	659.866285	1317.71802	2.4703	0.0016301	-0.69854	-0.00046094	1.7718	0.0011691	659.8651978762155	61.866	0.28368	61.866	61.677	61.96	0					18	8	3	0	0	0	0.28398	1	25799	25799		33.445	8.4539	1	549290			34352	3523	16933	17008	40127	40127					0.07186777709011949
TLLDPNEKYLL	11	Unmodified	_TLLDPNEKYLL_					0	0	0		ENST00000478009.1_1_1:202935608-202936333:-|nuORF;ENSG00000159348|ENST00000367249|CYB5R1	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	660.3696166872978	2	659.866285	1317.71802	1.9875	0.0013115	0.98525	0.00065014	2.9727	0.0019616	659.8663871872317	61.251	0.31297	61.581	61.422	61.735	0.32974					20	9	3	0	0	0	0.16578	1	25665	25665		43.982	14.141	1	672590			34353	3523	16933	17008	40128	40128					0.07186777709011949
TLLDPNEKYLL	11	Unmodified	_TLLDPNEKYLL_					0	0	0		ENST00000478009.1_1_1:202935608-202936333:-|nuORF;ENSG00000159348|ENST00000367249|CYB5R1	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.8663818240166	2	659.866285	1317.71802	2.4401	0.0016102	0.6571	0.0004336	3.0972	0.0020438	659.8656762949166	60.113	0.39069	61.532	61.328	61.718	1.4196					28	12	3	0	0	0	0.031367	1	25229	25229		78.61	38.371	1	2456700			34354	3523	16933	17008	40129	40129					0.07186777709011949
TLLDPNEKYLL	11	Unmodified	_TLLDPNEKYLL_					0	0	0		ENST00000478009.1_1_1:202935608-202936333:-|nuORF;ENSG00000159348|ENST00000367249|CYB5R1	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	ENST00000478009.1_1_1:202935608-202936333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.8681518435478	2	659.866285	1317.71802	2.7439	0.0018106	-1.4887	-0.00098235	1.2552	0.00082825	659.8645919910957	59.632	0.32809	61.601	61.435	61.763	1.969					21	10	3	0	0	0	0.039663	1	25032	25032		70.496	37.051	1	1977400			34355	3523	16933	17008	40130	40130					0.07186777709011949
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1062.547045886517	1	1062.5466	1061.53933	1.9188	0.0020388	-0.44698	-0.00047493	1.4718	0.0015638	1062.5461160127331	75.581	0.38068	75.581	75.374	75.755	0					17	11	2	0	0	0	0.059546	1	31447	31447		64.236	37.353	1	758240			34356	2163	16934	17009	40131	40131					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1062.547412097454	1	1062.5466	1061.53933	3.1528	0.00335	-1.3965	-0.0014838	1.7563	0.0018662	1062.5475898480352	75.181	0.28783	75.506	75.361	75.649	0.32464					13	8	2	0	0	0	0.11568	1	31482	31482		10.824	0	1	710630			34357	2163	16934	17009	40132	40132					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.7720825076103	2	531.776939	1061.53933	3.4538	0.0018367	-4.153	-0.0022085	-0.69917	-0.0003718	531.7747951868384	74.227	0.27915	75.545	75.342	75.621	1.318					23	8	3	0	0	0	0.031324	1	31117	31117		85.357	40.95	1	5901200			34358	2163	16934	17009	40133	40133					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1062.549487292767	1	1062.5466	1061.53933	4.0623	0.0043164	-1.1605	-0.0012331	2.9018	0.0030833	1062.544905147934	74.203	0.36551	75.521	75.374	75.739	1.318					29	11	3	0	0	0	0.0092758	2	31180	31127;31180		108	64.139	1	4518200			34359	2163	16934	17009	40134;40135	40135					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1062.548999011517	1	1062.5466	1061.53933	3.5679	0.003791	-0.66585	-0.0007075	2.902	0.0030835	1062.545540824819	73.756	0.43069	75.552	75.377	75.808	1.7962					30	13	3	0	0	0	5.2553E-05	2	30967	30918;30967		149.99	95.221	1	5890000			34360	2163	16934	17009	40136;40137	40137					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.8058349490166	2	531.776939	1061.53933	3.159	0.0016799	-2.2282	-0.0011849	0.93079	0.00049497	531.7759834137237	73.775	0.27995	75.571	75.377	75.657	1.7962					18	8	3	0	0	0	0.025182	1	30966	30966		50.855	40.781	1	3237000			34361	2163	16934	17009	40138	40138					0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	531.776939	1061.53933	1.881	0.0010003	-4.6668	-0.0024817	-2.7858	-0.0014814	531.7741584989877	75.587	0.31728	75.587	75.406	75.723	0	0.050973	-0.0015209	NaN	50.855	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2363200			34362	2163	16934	17009							0.011017328607522359
TLLDSTWNL	9	Unmodified	_TLLDSTWNL_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;nc|ENSG00000122642|O95302-2|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.776939	1061.53933	2.629	0.001398	-5.0255	-0.0026724	-2.3965	-0.0012744	531.7740567633326	75.116	0.31985	75.441	75.329	75.649	0.32464	-0.09509	-0.0019023	NaN	50.855	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1656000			34363	2163	16934	17009							0.011017328607522359
TLLDVLVCL	9	Unmodified	_TLLDVLVCL_					0	0	0		CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	494.3297912478447	2	494.791004	987.567454	2.6708	0.0013215	-2.7488	-0.0013601	-0.077986	-3.8587E-05	494.78987953568935	78.528	0.27714	79.795	79.602	79.879	1.2668					14	8	2	0	0	0	0.040432	1	32961	32961		50.855	6.448	1	826650			34364	135	16935	17010	40139	40139					0.07317339516498578
TLLEDGTFKV	10	Unmodified	_TLLEDGTFKV_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.8079711794853	2	561.805697	1121.59684	1.5329	0.00086119	-0.32452	-0.00018232	1.2084	0.00067887	561.8061102614072	52.024	0.33853	52.024	51.822	52.161	0					18	10	2	0	0	0	0.60754	1	21692	21692		22.658	7.4096	1	1065500			34365	3358	16936	17011	40140	40140					0.04090575066334168
TLLEDGTFKV	10	Unmodified	_TLLEDGTFKV_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.8074218630791	2	561.805697	1121.59684	1.6326	0.00091718	0.99262	0.00055766	2.6252	0.0014748	561.8062214246664	51.539	0.24838	51.865	51.726	51.975	0.32553					13	7	2	0	0	0	0.60754	1	21586	21586		22.658	7.4096	1	1030000			34366	3358	16936	17011	40141	40141					0.04090575066334168
TLLEDGTFKV	10	Unmodified	_TLLEDGTFKV_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8073608279228	2	561.805697	1121.59684	2.6964	0.0015149	-0.39545	-0.00022216	2.301	0.0012927	561.8053614491577	50.327	0.31195	51.72	51.55	51.862	1.3935					27	9	4	0	0	0	0.045734	2	21044	21044;21093		80.676	22.954	1	4982200			34367	3358	16936	17011	40142;40143	40142					0.04090575066334168
TLLEDGTFKV	10	Unmodified	_TLLEDGTFKV_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8078491091728	2	561.805697	1121.59684	1.6707	0.00093861	0.73947	0.00041544	2.4102	0.001354	561.8057578394321	49.792	0.34521	51.769	51.537	51.883	1.9772					29	10	4	0	0	0	0.14932	2	20861	20811;20861		55.235	25.147	1	3849400			34368	3358	16936	17011	40144;40145	40145					0.04090575066334168
TLLEEDKY	8	Unmodified	_TLLEEDKY_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.7590209841728	2	505.755672	1009.49679	3.0174	0.001526	2.6663	0.0013485	5.6837	0.0028746	505.7569993428622	92.466	0.55571	92.635	92.377	92.933	0.16835					45	17	4	0	0	0	0.7966	1	38667	38667		14.838	0	1	4573100	+		34369	9530	16937	17012	40146	40146					-0.007576622674719147
TLLEEDKY	8	Unmodified	_TLLEEDKY_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.5071288943291	3	337.506207	1009.49679	2.1441	0.00072366	2.2412	0.00075642	4.3853	0.0014801	337.5068853147485	92.478	0.52412	92.646	92.377	92.901	0.16835					37	16	3	0	0	0	0.75743	2	38741	38693;38741		24.991	4.9566	1	2443000	+		34370	9530	16937	17012	40147;40148	40148					-0.007576622674719147
TLLEEDKY	8	Unmodified	_TLLEEDKY_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.7597534060478	2	505.755672	1009.49679	4.4067	0.0022287	1.6701	0.00084468	6.0769	0.0030734	505.75657868935104	91.692	0.61565	92.628	92.34	92.955	0.93623					53	19	4	0	0	0	0.75743	1	38706	38706		24.021	12.38	1	12891000	+		34371	9530	16937	17012	40149	40149					-0.007576622674719147
TLLEEDKY	8	Unmodified	_TLLEEDKY_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.5081359744072	3	337.506207	1009.49679	2.8558	0.00096384	1.666	0.00056229	4.5218	0.0015261	337.50673112645313	91.332	0.4934	92.698	92.374	92.867	1.366					41	15	3	0	0	0	0.75743	2	38403	38403;38517		24.991	4.9566	1	6270600	+		34372	9530	16937	17012	40150;40151	40150					-0.007576622674719147
TLLEEDKY	8	Unmodified	_TLLEEDKY_					0	0	0			REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	REV__nc|ENSG00000119042|Q9UPW6-2|SATB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7585632205009	2	505.755672	1009.49679	3.3419	0.0016902	2.3884	0.001208	5.7303	0.0028981	505.7569749171451	91.327	0.62191	92.693	92.374	92.996	1.366					52	19	4	0	0	0	0.73212	1	38480	38480		32.786	8.1118	1	11587000	+		34373	9530	16937	17012	40152	40152					-0.007576622674719147
TLLEEPEA	8	Unmodified	_TLLEEPEA_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2310974001884	2	451.22929	900.444028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.21	103.71	104.71	0.1731								0	0	0	1.0178	1	43944	43944		2.3027	1.5091	1		+		34374	10214	16938	17013	40153	40153					-0.010176203302762588
TLLEKDYFL	9	Unmodified	_TLLEKDYFL_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.3101074099541	2	571.310615	1140.60668	1.7856	0.0010201	-1.178	-0.00067298	0.60764	0.00034715	571.3095490406021	59.134	0.34824	59.134	58.942	59.29	0					18	10	2	0	0	0	0.16939	1	24660	24660		36.506	5.8697	1	1003900			34375	3399	16939	17014	40154	40154					0.041997630717105494
TLLEKDYFL	9	Unmodified	_TLLEKDYFL_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3110229372978	2	571.310615	1140.60668	2.3596	0.0013481	-0.14732	-8.4166E-05	2.2123	0.0012639	571.3099027969944	58.531	0.30693	58.854	58.714	59.021	0.32298					17	10	2	0	0	0	0.22154	1	24577	24577		30.637	3.7529	1	1343700			34376	3399	16939	17014	40155	40155					0.041997630717105494
TLLEKDYFL	9	Unmodified	_TLLEKDYFL_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.3121826052666	2	571.310615	1140.60668	0.81368	0.00046486	-0.15278	-8.7287E-05	0.66089	0.00037757	571.3106585522353	56.82	0.36067	58.788	58.603	58.964	1.9684					20	11	2	0	0	0	0.087723	2	23832	23832;23888		53.404	9.5457	1	3965500			34377	3399	16939	17014	40156;40157	40156					0.041997630717105494
TLLEKDYFL	9	Unmodified	_TLLEKDYFL_					0	0	0		ENST00000582594.5_1_18:9547789-9550464:-|nuORF;ENST00000285124.12_1_18:9547789-9562973:-|nuORF;nc|ENSG00000154845|Q8TF05-2|PPP4R1;ENSG00000154845|ENST00000400556|PPP4R1	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	ENST00000582594.5_1_18:9547789-9550464:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	571.310615	1140.60668	0.5659	0.0003233	-0.0092502	-5.2848E-06	0.55665	0.00031802	571.3106736128238	57.417	0.2333	58.832	58.696	58.929	1.4145	-0.070325	0.00035645	NaN	53.404	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4434600			34378	3399	16939	17014							0.041997630717105494
TLLELLLV	8	Unmodified	_TLLELLLV_					0	0	0			REV__ENST00000506153.5_1_16:2889659-2891196:-|nuORF	REV__ENST00000506153.5_1_16:2889659-2891196:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5362731814384	3	305.2038	912.58957	-0.64378	-0.00019648	2.8901	0.00088208	2.2464	0.0006856	305.2046942464289	18.471	0.16436	19.45	19.341	19.506	0.97922					10	6	2	0	0	0	2.3239	1	7667	7667		0	0	1	944100	+		34379	13314	16940	17015	40158	40158					0.1297788725657938
TLLEWIVI	8	Unmodified	_TLLEWIVI_					0	0	0			REV__ENSG00000170209|ENST00000303941|ANKK1	REV__ENSG00000170209|ENST00000303941|ANKK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8012267947197	2	493.799686	985.584819	3.3367	0.0016477	-0.38629	-0.00019075	2.9504	0.0014569	493.8000182324136	91.913	0.57945	93.24	92.989	93.568	1.3269					28	17	2	0	0	0	0.80415	1	38742	38742		20.871	1.4322	1	1922500	+		34380	10977	16941	17016	40159	40159					0.09145003113803796
TLLFLGGRVA	10	Unmodified	_TLLFLGGRVA_					0	0	0			REV__ENST00000453571.5_1_11:47290775-47295429:+|nuORF	REV__ENST00000453571.5_1_11:47290775-47295429:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.5501281619072	3	349.550082	1045.62842	0.13516	4.7244E-05	0.81289	0.00028415	0.94805	0.00033139	349.5503559172089	24.176	0.42746	25.86	25.662	26.089	1.6845					21	13	2	0	0	0	0.89803	1	10105	10105		0.62683	0	1	398170	+		34381	13151	16942	17017	40160	40160					0.10742612610965807
TLLFLRKKF	9	Unmodified	_TLLFLRKKF_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2544738650322	3	389.253376	1164.7383	1.0572	0.00041153	1.6635	0.00064751	2.7207	0.001059	389.25439086783496	28.843	0.67502	29.122	28.705	29.38	0.2793					85	21	6	0	0	0	0.8462	1	11995	11995		1.0715	0	1	155380000	+		34382	8529	16943	17018	40161	40161					0.16252037950130216
TLLFLRKKF	9	Unmodified	_TLLFLRKKF_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3776733279228	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.746	1	29.024	28.524	29.524	1.2789								0	0	0	0.42693	1	11627	11627		0.52476	0	1		+		34383	8529	16943	17018	40162	40162					0.16252037950130216
TLLFLRKKF	9	Unmodified	_TLLFLRKKF_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3778564333916	2	583.376426	1164.7383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.025	1	29.304	28.804	29.804	1.2789								0	0	0	0.42693	1	11745	11745		0	0	1		+		34384	8529	16943	17018	40163	40163					0.16252037950130216
TLLFLRKKF	9	Unmodified	_TLLFLRKKF_					0	0	0			REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	REV__ENST00000464567.1_1_X:100629364-100630272:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2541992068291	3	389.253376	1164.7383	0.50243	0.00019557	1.7288	0.00067294	2.2312	0.00086851	389.2544596413454	27.379	0.9561	29.126	28.865	29.821	1.747					116	30	6	0	0	0	0.8462	1	11369	11369		1.0715	0.29493	1	144500000	+		34385	8529	16943	17018	40164	40164					0.16252037950130216
TLLFQLAI	8	Unmodified	_TLLFQLAI_					0	0	0			REV__tr|A0A7D6VVS4|A0A7D6VVS4_9CLOTUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06165PE=4SV=1	REV__tr|A0A7D6VVS4|A0A7D6VVS4_9CLOTUndecaprenyl/decaprenyl-phosphatealpha-N-acetylglucosaminyl1-phosphatetransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06165PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1737853884697	2	459.786579	917.558604	4.3605	0.0020049	-0.10588	-4.8684E-05	4.2546	0.0019562	459.78550204505154	91.755	0.27319	92.691	92.588	92.861	0.93623					9	8	2	0	0	0	2.3239	1	38684	38684		2.5775	0	1	583920	+		34386	15536	16944	17019	40165	40165					0.09652733942323266
TLLGDAFSVW	10	Unmodified	_TLLGDAFSVW_					0	0	0		ENST00000378756.7_1_1:1469641-1469725:+|nuORF	ENST00000378756.7_1_1:1469641-1469725:+|nuORF	ENST00000378756.7_1_1:1469641-1469725:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	555.3308593630791	2	554.787307	1107.56006	3.6467	0.0020231	-0.55437	-0.00030756	3.0923	0.0017156	554.7868402002603	81.86	0.27817	83.073	82.883	83.162	1.2125					12	8	2	0	0	0	0.12412	1	34328	34328		14.838	3.198	1	828030			34387	6205	16945	17020	40166	40166					0.010583232404314913
TLLGHEFVL	9	Unmodified	_TLLGHEFVL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.7935058474541	2	514.792392	1027.57023	2.3555	0.0012126	0.027976	1.4402E-05	2.3834	0.001227	514.792463916879	62.664	0.3719	62.664	62.492	62.864	0					25	11	3	0	0	0	0.19075	2	26145	26096;26145		34.102	5.6156	1	1271500			34388	476	16946	17021	40167;40168	40168					0.057549309656678815
TLLGHEFVL	9	Unmodified	_TLLGHEFVL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.7941161990166	2	514.792392	1027.57023	2.0819	0.0010718	-0.094191	-4.8489E-05	1.9877	0.0010233	514.7922814915182	62.123	0.6833	62.452	61.981	62.665	0.32974					26	21	2	0	0	0	0.083604	2	26000	26000;26053		54.774	26.287	1	1050700			34389	476	16946	17021	40169;40170	40169					0.057549309656678815
TLLGHEFVL	9	Unmodified	_TLLGHEFVL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.7936889529228	2	514.792392	1027.57023	3.4769	0.0017899	-1.0345	-0.00053256	2.4424	0.0012573	514.79145290903	60.832	0.53941	62.252	61.933	62.473	1.4196					31	16	3	0	0	0	0.033794	2	25511	25511;25564		81.613	39.519	1	4930000			34390	476	16946	17021	40171;40172	40171					0.057549309656678815
TLLGHEFVL	9	Unmodified	_TLLGHEFVL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000533415.5_1_17:45198303-45266605:-|nuORF;ENST00000425026.1_1_Y:10028050-10028227:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.7933837771416	2	514.792392	1027.57023	3.5446	0.0018247	-1.1239	-0.00057858	2.4207	0.0012462	514.791659515787	60.257	0.50488	62.222	61.915	62.42	1.9653					28	12	3	0	0	0	0.026628	2	25288	25288;25340		92.822	44.476	1	5636000			34391	476	16946	17021	40173;40174	40173					0.057549309656678815
TLLGLSPPCDI	11	Unmodified	_TLLGLSPPCDI_					0	0	0			REV__tr|A0A553SHM6|A0A553SHM6_NIACIParAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13240PE=4SV=1	REV__tr|A0A553SHM6|A0A553SHM6_NIACIParAfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.8033325076103	2	564.8021	1127.58965	1.5748	0.00088946	2.184	0.0012335	3.7589	0.002123	564.8032976344739	40.167	0.34596	40.48	40.288	40.634	0.31262					17	10	2	0	0	0	0.85967	1	16876	16876		12.241	0	1	508750	+		34392	14802	16947	17022	40175	40175					0.030955191942666715
TLLGWAFFEL	10	Unmodified	_TLLGWAFFEL_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	598.8206054568291	2	598.82115	1195.62775	1.796	0.0010755	-2.6857	-0.0016083	-0.88969	-0.00053276	598.8196804105152	63.784	0.39027	64.113	63.883	64.273	0.32899					21	12	2	0	0	0	0.5476	1	26715	26715		25.399	1.6095	1	1267300	+		34393	10523	16948	17023	40176	40176					0.03775773171241781
TLLIIPVGS	9	Unmodified	_TLLIIPVGS_					0	0	0			REV__tr|A0A553SRH9|A0A553SRH9_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_01145PE=4SV=1	REV__tr|A0A553SRH9|A0A553SRH9_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_01145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.8644286990166	3	304.863666	911.569169	0.023047	7.026E-06	2.4907	0.00075931	2.5137	0.00076634	304.8644005792694	22.371	0.41525	22.594	22.465	22.88	0.223					36	13	3	0	0	0	0.83753	2	9299	9299;9400		0.96228	0.50394	1	7559100	+		34394	15161	16949	17024	40177;40178	40177					0.10984716596760791
TLLIIPVGS	9	Unmodified	_TLLIIPVGS_					0	0	0			REV__tr|A0A553SRH9|A0A553SRH9_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_01145PE=4SV=1	REV__tr|A0A553SRH9|A0A553SRH9_NIACIDNA-bindingresponseregulatorOS=NialliacirculansOX=1397GN=CEQ21_01145PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.8648864626884	3	304.863666	911.569169	-0.24227	-7.386E-05	2.6353	0.00080341	2.393	0.00072955	304.86446530000063	21.388	0.42435	22.565	22.415	22.839	1.177					48	13	4	0	0	0	0.83753	1	8904	8904		0.96228	0.50394	1	7836700	+		34395	15161	16949	17024	40179	40179					0.10984716596760791
TLLKQLPCI	9	Unmodified	_TLLKQLPCI_					0	0	0		nc|ENSG00000118200|Q08AD1-2|CAMSAP2;ENSG00000118200|ENST00000358823|CAMSAP2;nc|ENSG00000118200|Q08AD1|CAMSAP2	nc|ENSG00000118200|Q08AD1-2|CAMSAP2	nc|ENSG00000118200|Q08AD1-2|CAMSAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8142578005791	2	514.81227	1027.60999	2.297	0.0011825	0.11181	5.7564E-05	2.4088	0.0012401	514.8122488119769	49.439	0.33784	50.83	50.704	51.042	1.3911					20	10	2	0	0	0	0.37357	1	20713	20713		21.747	0	1	751600			34396	2032	16950	17025	40180	40180					0.0972873464472741
TLLKTKLS	8	Unmodified	_TLLKTKLS_					0	0	0		ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant;nc|ENSG00000103310|Q05996-2|ZP2;ENSG00000103310|ENST00000574091|ZP2	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2979003787041	2	452.29731	902.580068	3.0031	0.0013583	-1.8121	-0.00081962	1.1909	0.00053866	452.2966218474865	84.057	0.3699	84.318	84.067	84.437	0.26083					29	11	3	0	0	0	0.89181	1	35153	35153		0.6015	0	1	2634100			34397	1426	16951	17026	40181	40181					0.12488118971032236
TLLKTKLS	8	Unmodified	_TLLKTKLS_					0	0	0		ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant;nc|ENSG00000103310|Q05996-2|ZP2;ENSG00000103310|ENST00000574091|ZP2	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	452.29731	902.580068	2.3254	0.0010518	-2.2842	-0.0010331	0.041248	1.8656E-05	452.2962027308859	84.197	0.40369	84.197	83.996	84.399	0	-0.10251	-0.00043573	NaN	0.6015	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2858000			34398	1426	16951	17026							0.12488118971032236
TLLKTKLS	8	Unmodified	_TLLKTKLS_					0	0	0		ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant;nc|ENSG00000103310|Q05996-2|ZP2;ENSG00000103310|ENST00000574091|ZP2	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	ZP2|p.I441Mfs*15|1|0.17|ENSG00000103310|chr16:21201988-21201989|-/C|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.29731	902.580068	2.5498	0.0011533	-1.3348	-0.00060371	1.215	0.00054955	452.29655179057545	83.195	0.40457	84.383	84.142	84.547	1.1879	0.084126	0.00042312	NaN	0.6015	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211400			34399	1426	16951	17026							0.12488118971032236
TLLLDEVVA	9	Unmodified	_TLLLDEVVA_					0	0	0		ENST00000506052.1_1_17:48539604-48540054:+|nuORF;nc|ENSG00000167107|Q96CM8-4|ACSF2;nc|ENSG00000167107|Q96CM8-3|ACSF2;ENSG00000167107|ENST00000300441|ACSF2;nc|ENSG00000167107|Q96CM8-2|ACSF2	ENST00000506052.1_1_17:48539604-48540054:+|nuORF	ENST00000506052.1_1_17:48539604-48540054:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.5699340701103	1	972.561189	971.553913	3.9039	0.0037967	-1.7031	-0.0016563	2.2008	0.0021404	972.5594887794206	91.644	0.67918	92.58	92.34	93.019	0.93624					70	21	4	0	0	0	0.09539	1	38755	38755		50.855	0	1	107400000			34400	3948	16952	17027	40182	40182					0.06699805008906878
TLLLLLSEA	9	Unmodified	_TLLLLLSEA_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.5998412966728	1	972.597575	971.590298	2.4382	0.0023714	-4.161	-0.004047	-1.7228	-0.0016756	972.5923567693972	88.652	0.45818	88.652	88.304	88.762	0					21	14	2	0	0	0	0.12174	1	36985	36985		42.095	7.9072	1	1270900			34401	5151	16953	17028	40183	40183					0.10336681905619116
TLLLLLSEA	9	Unmodified	_TLLLLLSEA_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF	ENSG00000204592|ENST00000376630|HLA-E	ENSG00000204592|ENST00000376630|HLA-E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.5953857302666	1	972.597575	971.590298	3.8531	0.0037475	-2.0314	-0.0019757	1.8217	0.0017718	972.5958981087608	87.072	0.2765	88.163	88.09	88.366	1.0918					10	8	2	0	0	0	0.066815	1	36756	36756		61.357	13.012	1	2211800			34402	5151	16953	17028	40184	40184					0.10336681905619116
TLLLRAVRLRR	11	Unmodified	_TLLLRAVRLRR_					0	0	0			REV__ENST00000457861.1_1_7:935124-935304:+|nuORF	REV__ENST00000457861.1_1_7:935124-935304:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	341.9823181033134	4	342.483394	1365.90447	0.056141	1.9227E-05	0.24738	8.4725E-05	0.30352	0.00010395	342.48324591841083	23.187	0.42974	24.839	24.624	25.054	1.6511					14	13	2	0	0	0	0.14606	1	9698	9698		0.40827	0.31342	1	259350	+		34403	13173	16954	17029	40185	40185					0.23615484178662882
TLLLTPGLCL	10	Unmodified	_TLLLTPGLCL_					0	0	0			REV__ENST00000335290.10_1_14:100842832-100847262:+|nuORF	REV__ENST00000335290.10_1_14:100842832-100847262:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.5443603396416	3	348.543828	1042.60965	-1.1509	-0.00040114	2.5024	0.0008722	1.3515	0.00047106	348.54458243911415	14.692	0.16668	15.461	15.352	15.519	0.76937					8	5	2	0	0	0	0.82019	1	6105	6105		5.7834	0	1	509290	+		34404	12464	16955	17030	40186	40186					0.0900531492486607
TLLMKRMM	8	Unmodified	_TLLMKRMM_					0	0	0		ENST00000304337.2_1_4:153690730-153690883:-|nuORF	ENST00000304337.2_1_4:153690730-153690883:-|nuORF	ENST00000304337.2_1_4:153690730-153690883:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.0759460330009	3	341.855243	1022.5439	-1.4226	-0.00048632	2.6803	0.00091626	1.2577	0.00042995	341.8557134538151	79.708	0.68106	79.708	79.453	80.135	0					29	21	2	0	0	0	2.3239	1	33270	33270		0.45834	0	1	717000			34405	5772	16956	17031	40187	40187					0.033528792066817914
TLLNKCVKS	9	Unmodified	_TLLNKCVKS_					0	0	0			REV__tr|A0A7D6W0X4|A0A7D6W0X4_9CLOTNADH-quinoneoxidoreductasesubunitNuoFOS=ClostridiumintestinaleOX=36845GN=HZF06_01040PE=3SV=1	REV__tr|A0A7D6W0X4|A0A7D6W0X4_9CLOTNADH-quinoneoxidoreductasesubunitNuoFOS=ClostridiumintestinaleOX=36845GN=HZF06_01040PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.2926818728447	2	503.291702	1004.56885	2.7844	0.0014013	-0.53488	-0.0002692	2.2495	0.0011321	503.29152954905885	73.85	0.4291	75.646	75.409	75.838	1.7962					28	13	3	0	0	0	0.51189	1	30971	30971		14.838	1.3304	1	2407000	+		34406	15584	16957	17032	40188	40188					0.06674973605254308
TLLNVIKSV	9	Unmodified	_TLLNVIKSV_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000538984.1_1_12:26564247-26572125:-|nuORF	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8170349001884	2	493.815867	985.617182	1.2646	0.00062446	-0.26228	-0.00012952	1.0023	0.00049495	493.8165174505033	55.395	0.35115	56.805	56.586	56.937	1.4099					31	11	4	0	0	0	0.093705	2	23187	23187;23237		51.415	17.713	1	3300300			34407	2180	16958	17033	40189;40190	40189					0.12379790516808953
TLLNVIKSV	9	Unmodified	_TLLNVIKSV_					0	0	0		ENSG00000123104|ENST00000381340|ITPR2;ENST00000493491.5_1_3:4841632-4887906:+|nuORF;ARL8B-ITPR1|2|fusion;ARL8B-ITPR1|4|fusion;ARL8B-ITPR1|5|fusion;nc|ENSG00000150995|Q14643-4|ITPR1;nc|ENSG00000150995|Q14643-3|ITPR1;nc|ENSG00000150995|Q14643-8|ITPR1;nc|ENSG00000150995|Q14643-7|ITPR1;nc|ENSG00000150995|Q14643-5|ITPR1;nc|ENSG00000150995|Q14643-6|ITPR1;nc|ENSG00000150995|Q14643-2|ITPR1;ENSG00000150995|ENST00000649015|ITPR1;ENST00000538984.1_1_12:26564247-26572125:-|nuORF	ENSG00000123104|ENST00000381340|ITPR2	ENSG00000123104|ENST00000381340|ITPR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8173095583916	2	493.815867	985.617182	0.94925	0.00046876	0.34983	0.00017275	1.2991	0.00064151	493.8165709814379	54.915	0.2917	56.884	56.668	56.959	1.9684					26	9	4	0	0	0	0.071837	2	22979	22979;23028		59.368	28.1	1	2908100			34408	2180	16958	17033	40191;40192	40191					0.12379790516808953
TLLNYDKVF	9	Unmodified	_TLLNYDKVF_					0	0	0			REV__tr|A0A7D6ZEL8|A0A7D6ZEL8_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14210PE=4SV=1	REV__tr|A0A7D6ZEL8|A0A7D6ZEL8_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14210PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8054077029228	2	556.802957	1111.59136	1.8223	0.0010147	3.1863	0.0017741	5.0086	0.0027888	556.8041337680124	38.681	0.32701	39.977	39.805	40.132	1.2961					20	10	3	0	0	0	0.32838	1	16217	16217		24.021	5.8742	1	1377600	+		34409	15623	16959	17034	40193	40193					0.040028962745282115
TLLNYDKVF	9	Unmodified	_TLLNYDKVF_					0	0	0			REV__tr|A0A7D6ZEL8|A0A7D6ZEL8_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14210PE=4SV=1	REV__tr|A0A7D6ZEL8|A0A7D6ZEL8_9CLOTMurR/RpiRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_14210PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	556.802957	1111.59136	1.8223	0.0010147	3.1863	0.0017741	5.0086	0.0027888	556.8041337680124	38.681	0.32701	39.977	39.805	40.132	1.2961	0.058293	-0.00035063	NaN	24.021	20	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1377600	+		34410	15623	16959	17034							0.040028962745282115
TLLPLLAALL	10	Unmodified	_TLLPLLAALL_					0	0	0		CDH2|p.M741Vfs*10|1|0.42|ENSG00000170558|chr18:27983071-27983072|AT/-|frameshift_variant;ENSG00000170558|ENST00000269141|CDH2	CDH2|p.M741Vfs*10|1|0.42|ENSG00000170558|chr18:27983071-27983072|AT/-|frameshift_variant	CDH2|p.M741Vfs*10|1|0.42|ENSG00000170558|chr18:27983071-27983072|AT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1407348513603	2	519.352086	1036.68962	3.3509	0.0017403	0.049138	2.552E-05	3.4	0.0017658	519.3518474226145	74.623	0.37166	75.929	75.876	76.247	1.3063					14	11	2	0	0	0	0.12397	1	31428	31428		10.824	0	1	497580			34411	138	16960	17035	40194	40194					0.1727412459038078
TLLPLRVFL	9	Unmodified	_TLLPLRVFL_					0	0	0		nc|ENSG00000169762|Q6NXT6-2|TAPT1;ENSG00000169762|ENST00000405303|TAPT1	nc|ENSG00000169762|Q6NXT6-2|TAPT1	nc|ENSG00000169762|Q6NXT6-2|TAPT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8528930544853	2	536.349877	1070.6852	1.5239	0.00081734	-0.59511	-0.00031919	0.9288	0.00049816	536.3490332975146	83.939	0.38905	85.127	84.89	85.28	1.1879					24	12	3	0	0	0	0.079895	2	35198	35198;35245		56.177	20.05	1	4380600			34412	4110	16961	17036	40195;40196	40195					0.15268660167453163
TLLPLRVFL	9	Unmodified	_TLLPLRVFL_					0	0	0		nc|ENSG00000169762|Q6NXT6-2|TAPT1;ENSG00000169762|ENST00000405303|TAPT1	nc|ENSG00000169762|Q6NXT6-2|TAPT1	nc|ENSG00000169762|Q6NXT6-2|TAPT1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	536.349877	1070.6852	2.6231	0.0014069	-0.82403	-0.00044197	1.7991	0.00096494	536.3490719196955	84.898	0.38035	85.159	84.983	85.363	0.26083	0.042646	-8.8435E-05	NaN	56.177	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1214800			34413	4110	16961	17036							0.15268660167453163
TLLRLAGPPI	10	Unmodified	_TLLRLAGPPI_					0	0	0		ENSG00000187550|ENST00000413299|SBK2	ENSG00000187550|ENST00000413299|SBK2	ENSG00000187550|ENST00000413299|SBK2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.1820556521416	3	350.893848	1049.65972	1.198	0.00042038	2.2397	0.0007859	3.4377	0.0012063	351.2273806353749	44.398	0.16124	45.763	45.674	45.836	1.3653					6	4	2	0	0	0	0.12559	1	18594	18594		0.77653	0.078866	1	668070			34414	4828	16962	17037	40197	40197					0.1368718564503979
TLLRLLLR	8	Unmodified	_TLLRLLLR_					0	0	0		ENST00000395526.8_1_10:51956672-51962602:-|nuORF;ENST00000374007.5_2_10:52499748-52504894:+|nuORF;nc|ENSG00000204147|P0C7U1|ASAH2B;ENSG00000183921|ENST00000602312|SDR42E2	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3500854372978	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.568	1	92.568	92.068	93.068	0								0	0	0	1.0178	1	38686	38686		0.79363	0	1				34415	4677	16963	17038	40198	40198					0.18231195744579054
TLLRLLLR	8	Unmodified	_TLLRLLLR_					0	0	0		ENST00000395526.8_1_10:51956672-51962602:-|nuORF;ENST00000374007.5_2_10:52499748-52504894:+|nuORF;nc|ENSG00000204147|P0C7U1|ASAH2B;ENSG00000183921|ENST00000602312|SDR42E2	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3485290408134	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.048	1	93.048	92.548	93.548	0								0	0	0	1.0178	1	38892	38892		0.79363	0	1				34416	4677	16963	17038	40199	40199					0.18231195744579054
TLLRLLLR	8	Unmodified	_TLLRLLLR_					0	0	0		ENST00000395526.8_1_10:51956672-51962602:-|nuORF;ENST00000374007.5_2_10:52499748-52504894:+|nuORF;nc|ENSG00000204147|P0C7U1|ASAH2B;ENSG00000183921|ENST00000602312|SDR42E2	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	ENST00000395526.8_1_10:51956672-51962602:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3508483767509	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.933	1	96.933	96.433	97.433	0								0	0	0	1.0178	1	40523	40523		0	0	1				34417	4677	16963	17038	40200	40200					0.18231195744579054
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3278686404228	2	546.326599	1090.63865	1.5341	0.00083813	1.1475	0.00062691	2.6816	0.001465	546.326891664165	65.338	0.63606	65.338	65.072	65.708	0					42	19	3	0	0	0	0.047853	2	27234	27194;27234		69.338	32.149	1	4437300			34418	3228	16964	17039	40201;40202	40202					0.09695175545539314
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3278076052666	2	546.326599	1090.63865	1.9093	0.0010431	0.31207	0.00017049	2.2213	0.0012136	546.3267433157537	64.715	0.56895	65.042	64.819	65.388	0.32688					31	17	2	0	0	0	0.052364	3	27089	27089;27143;27213		67.081	25.125	1	6983900			34419	3228	16964	17039	40203;40204;40205	40203					0.09695175545539314
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3281127810478	2	546.326599	1090.63865	2.2419	0.0012248	1.1866	0.00064825	3.4285	0.0018731	546.3269046721755	63.451	0.84129	64.864	64.566	65.407	1.4134					48	26	4	0	0	0	0.045139	2	26587	26587;26639		71.708	31.758	1	18739000			34420	3228	16964	17039	40206;40207	40206					0.09695175545539314
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3273803591728	2	546.326599	1090.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.8	1	64.744	64.244	65.244	1.9444								0	0	0	0.023978	1	26352	26352		87.258	37.325	1				34421	3228	16964	17039	40208	40208					0.09695175545539314
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3276855349541	2	546.326599	1090.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.917	1	64.862	64.362	65.362	1.9444								0	0	0	0.025896	1	26401	26401		83.429	41.334	1				34422	3228	16964	17039	40209	40209					0.09695175545539314
TLLRLLYEA	9	Unmodified	_TLLRLLYEA_					0	0	0		ENSG00000149100|ENST00000531120|EIF3M;nc|ENSG00000149100|Q7L2H7-2|EIF3M;ENST00000524711.5_1_11:32608681-32615496:+|nuORF	ENSG00000149100|ENST00000531120|EIF3M	ENSG00000149100|ENST00000531120|EIF3M	MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3271972537041	2	546.326599	1090.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.025	1	64.97	64.47	65.47	1.9444								0	0	0	0.043389	1	26447	26447		49.527	21.898	1				34423	3228	16964	17039	40210	40210					0.09695175545539314
TLLSFTGER	9	Unmodified	_TLLSFTGER_					0	0	0			REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.8547851443291	3	341.85383	1022.53966	0.86662	0.00029626	2.7554	0.00094196	3.6221	0.0012382	341.85454263589713	77.659	0.45478	79.41	79.167	79.622	1.7514					29	14	3	0	0	0	0.50891	1	32599	32599		14.957	2.7165	1	2141000	+		34424	8240	16965	17040	40211	40211					0.0292915258062294
TLLSFTGER	9	Unmodified	_TLLSFTGER_					0	0	0			REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	341.85383	1022.53966	1.3158	0.0004498	3.5244	0.0012048	4.8402	0.0016546	341.8549350221889	78.146	0.47929	79.427	79.259	79.738	1.2809	-0.087895	-0.00025602	NaN	14.957	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1303500	+		34425	8240	16965	17040							0.0292915258062294
TLLSFTGER	9	Unmodified	_TLLSFTGER_					0	0	0			REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	REV__chr11:65999675-65999779|94|13.95|0.71|4.29|-|0|EIF1AD,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	341.85383	1022.53966	0.86662	0.00029626	2.7554	0.00094196	3.6221	0.0012382	341.85454263589713	77.659	0.45478	79.41	79.167	79.622	1.7514	-0.10518	-0.0010447	NaN	14.957	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2141000	+		34426	8240	16965	17040							0.0292915258062294
TLLSVKLEVL	10	Unmodified	_TLLSVKLEVL_					0	0	0		ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	ENSG00000145703|ENST00000274364|IQGAP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8560058474541	2	557.857732	1113.70091	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.818	1	55.788	55.288	56.288	1.9697								0	0	0	0.64675	1	22547	22547		17.113	2.5312	1				34427	3119	16966	17041	40212	40212					0.14860901893848677
TLLSVLILTA	10	Unmodified	_TLLSVLILTA_					0	0	0		tr|A0A7D7A4B4|A0A7D7A4B4_9CLOTTraB/GumNfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02310PE=4SV=1	tr|A0A7D7A4B4|A0A7D7A4B4_9CLOTTraB/GumNfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02310PE=4SV=1	tr|A0A7D7A4B4|A0A7D7A4B4_9CLOTTraB/GumNfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.3401367068291	2	522.339175	1042.6638	3.1877	0.0016651	-1.0799	-0.00056409	2.1078	0.001101	522.3385315587317	106.01	0.18445	106.18	106.09	106.27	0.16174					35	9	5	0	0	0	0.89803	1	45212	45212		1.4819	0.79152	1	814430000			34428	17284	16967	17042	40213	40213					0.14417230348112753
TLLSYDELG	9	Unmodified	_TLLSYDELG_					0	0	0			REV__tr|A0A553SSI6|A0A553SSI6_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_03170PE=4SV=1	REV__tr|A0A553SSI6|A0A553SSI6_NIACISporulationproteinOS=NialliacirculansOX=1397GN=CEQ21_03170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7583801150322	2	505.755672	1009.49679	3.3419	0.0016902	2.3884	0.001208	5.7303	0.0028981	505.7569749171451	91.327	0.62191	92.693	92.374	92.996	1.366					52	19	4	0	0	0	0.15456	1	38429	38429		42.095	2.1372	1	11587000	+		34429	15206	16968	17043	40214	40214					-0.007576622674719147
TLLTAIVKL	9	Unmodified	_TLLTAIVKL_					0	0	0		nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.3296386599541	2	486.328611	970.642668	1.702	0.00082771	0.62187	0.00030243	2.3238	0.0011301	486.32884894091455	72.316	0.41428	72.316	72.173	72.588	0					25	12	3	0	0	0	0.063746	2	30097	30097;30159		62.573	12.64	1	2076500			34430	503	16969	17044	40215;40216	40215					0.15617265039236372
TLLTAIVKL	9	Unmodified	_TLLTAIVKL_					0	0	0		nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.3292114138603	2	486.328611	970.642668	3.0498	0.0014832	-0.95918	-0.00046648	2.0906	0.0010167	486.328080901799	70.437	0.54475	71.79	71.584	72.129	1.3536					35	16	3	0	0	0	0.0080158	1	29564	29564		110.67	38.752	1	4222200			34431	503	16969	17044	40217	40217					0.15617265039236372
TLLTAIVKL	9	Unmodified	_TLLTAIVKL_					0	0	0		nc|ENSG00000006125|P63010-3|AP2B1;nc|ENSG00000006125|P63010|AP2B1;ENSG00000006125|ENST00000610402|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	nc|ENSG00000006125|P63010-3|AP2B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3294250369072	2	486.328611	970.642668	2.7649	0.0013446	-1.5746	-0.0007658	1.1902	0.00057884	486.32769502734794	69.862	0.63615	71.7	71.5	72.136	1.8378					34	19	3	0	0	0	0.04812	1	29332	29332		69.105	10.426	1	3362000			34432	503	16969	17044	40218	40218					0.15617265039236372
TLLTFFHEL	9	Unmodified	_TLLTFFHEL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;FANCI|p.G1139R|1|0.12|ENSG00000140525|chr15:89306072-89306072|G/C|missense_variant	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8064453005791	2	560.8055	1119.59645	1.4144	0.00079322	0.3447	0.00019331	1.7591	0.00098653	560.8060325544487	80.432	0.31546	80.432	80.257	80.572	0					16	9	2	0	0	0	0.20671	1	33502	33502		32.305	10.559	1	606980			34433	2922	16970	17045	40219	40219					0.04143200137150416
TLLTFFHEL	9	Unmodified	_TLLTFFHEL_					0	0	0		nc|ENSG00000140525|Q9NVI1-2|FANCI;nc|ENSG00000140525|Q9NVI1-1|FANCI;ENSG00000140525|ENST00000310775|FANCI;FANCI|p.G1139R|1|0.12|ENSG00000140525|chr15:89306072-89306072|G/C|missense_variant	nc|ENSG00000140525|Q9NVI1-2|FANCI	nc|ENSG00000140525|Q9NVI1-2|FANCI	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	560.8055	1119.59645	1.7463	0.00097932	0.10471	5.8723E-05	1.851	0.001038	560.805158585564	79.846	0.31689	80.147	79.972	80.289	0.30047	-0.14237	-0.00020724	NaN	32.305	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421920			34434	2922	16970	17045							0.04143200137150416
TLLVALVLL	9	Unmodified	_TLLVALVLL_					0	0	0			REV__ENSG00000170890|ENST00000308366|PLA2G1B	REV__ENSG00000170890|ENST00000308366|PLA2G1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	954.6548339724541	1	954.659781	953.652505	1.2799	0.0012219	-1.2721	-0.0012144	0.0078017	7.448E-06	954.657980464407	98.404	0.28416	98.404	98.353	98.638	0					25	10	4	0	0	0	0.031324	1	41195	41195		85.357	0	1	384530000	+		34435	11001	16971	17046	40220	40220					0.17382453044604063
TLLVFEDLL	9	Unmodified	_TLLVFEDLL_					0	0	0			REV__tr|A0A553STM4|A0A553STM4_NIACIGlycosylhydrolasefamily88OS=NialliacirculansOX=1397GN=CEQ21_05420PE=4SV=1	REV__tr|A0A553STM4|A0A553STM4_NIACIGlycosylhydrolasefamily88OS=NialliacirculansOX=1397GN=CEQ21_05420PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8111450076103	2	531.807708	1061.60086	3.4019	0.0018092	-3.6747	-0.0019542	-0.27279	-0.00014507	531.8055404233152	74.319	0.85188	75.637	75.342	76.194	1.318					46	27	2	0	0	0	0.34572	1	31163	31163		23.148	0	1	15376000	+		34436	15245	16972	17047	40221	40221					0.07252664560064659
TLLVLLVGLV	10	Unmodified	_TLLVLLVGLV_					0	0	0		ENST00000531236.1_1_11:71192390-71192594:+|nuORF	ENST00000531236.1_1_11:71192390-71192594:+|nuORF	ENST00000531236.1_1_11:71192390-71192594:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2432128787041	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.212	1	84.212	83.712	84.712	0								0	0	0	0.66254	1	35094	35094		0.15932	0	1				34437	7167	16973	17048	40222	40222					0.18746411107440508
TLLVVVPKL	9	Unmodified	_TLLVVVPKL_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1;ENST00000521671.1_1_8:104064982-104075474:+|nuORF	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.3398010134697	2	491.338978	980.663404	1.4208	0.00069807	-0.097961	-4.8132E-05	1.3228	0.00064994	491.33897004920794	68.627	0.25175	68.627	68.453	68.705	0					10	7	2	0	0	0	0.32838	1	28591	28591		24.021	2.2739	1	341980			34438	3408	16974	17049	40223	40223					0.17229855418895568
TLLVVVPKL	9	Unmodified	_TLLVVVPKL_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1;ENST00000521671.1_1_8:104064982-104075474:+|nuORF	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MSMS	GG20161007_CRH_Patient100_A02_02	2	491.3392516970634	2	491.338978	980.663404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.027	1	68.35	67.85	68.85	0.32269								0	0	0	0.15983	1	28477	28477		29.082	7.3349	1				34439	3408	16974	17049	40224	40224					0.17229855418895568
TLLVVVPKL	9	Unmodified	_TLLVVVPKL_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1;ENST00000521671.1_1_8:104064982-104075474:+|nuORF	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.3404724001884	2	491.338978	980.663404	1.8938	0.00093048	0.55371	0.00027206	2.4475	0.0012025	491.3393706637453	66.653	0.46754	68.042	67.843	68.31	1.3888					30	14	3	0	0	0	0.18809	2	27947	27947;27998		34.402	12.655	1	2018300			34440	3408	16974	17049	40225;40226	40225					0.17229855418895568
TLLVVVPKL	9	Unmodified	_TLLVVVPKL_					0	0	0		ENSG00000155097|ENST00000518738|ATP6V1C1;ENST00000521671.1_1_8:104064982-104075474:+|nuORF	ENSG00000155097|ENST00000518738|ATP6V1C1	ENSG00000155097|ENST00000518738|ATP6V1C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3399230837822	2	491.338978	980.663404	1.8516	0.00090978	0.034363	1.6884E-05	1.886	0.00092666	491.3388660192433	66.186	0.37507	68.075	67.839	68.214	1.8889					23	11	3	0	0	0	0.18809	2	27725	27725;27771		34.402	12.655	1	1588100			34441	3408	16974	17049	40227;40228	40227					0.17229855418895568
TLLWQLTW	8	Unmodified	_TLLWQLTW_					0	0	0		nc|ENSG00000259092|A0A087WSZ9|TRAV30	nc|ENSG00000259092|A0A087WSZ9|TRAV30	nc|ENSG00000259092|A0A087WSZ9|TRAV30	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.3287231326103	2	530.794935	1059.57532	1.9786	0.0010503	-3.7969	-0.0020154	-1.8183	-0.00096513	530.7920176472404	65.665	0.39428	67.574	67.312	67.706	1.9085					17	12	2	0	0	0	2.3239	1	27529	27529		14.582	2.0501	1	1057000			34442	8013	16975	17050	40229	40229					0.04791234828257984
TLMDMRLSQV	10	Unmodified	_TLMDMRLSQV_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6;PRPF6|p.R391Sfs*19|1|0.08|ENSG00000101161|chr20:64001224-64001231|CGGGTTCT/-|frameshift_variant	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3049804568291	2	597.304484	1192.59441	0.77032	0.00046011	-0.85802	-0.0005125	-0.087706	-5.2387E-05	597.3051624493844	51.426	0.35869	52.82	52.558	52.917	1.3938					20	11	3	0	0	0	0.045213	2	21499	21499;21553		80.896	36.914	1	3567100			34443	1325	16976	17051	40230;40231	40230					0.005820800653737024
TLMDMRLSQV	10	Unmodified	_TLMDMRLSQV_					0	0	0		ENSG00000101161|ENST00000266079|PRPF6;nc|ENSG00000101161|O94906-2|PRPF6;PRPF6|p.R391Sfs*19|1|0.08|ENSG00000101161|chr20:64001224-64001231|CGGGTTCT/-|frameshift_variant	ENSG00000101161|ENST00000266079|PRPF6	ENSG00000101161|ENST00000266079|PRPF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8068725466728	2	597.304484	1192.59441	0.1305	7.7947E-05	0.53984	0.00032245	0.67033	0.00040039	597.8062042093104	50.815	0.27609	52.791	52.606	52.882	1.9753					20	8	3	0	0	0	0.053881	2	21306	21259;21306		89.609	45.836	1	3599400			34444	1325	16976	17051	40232;40233	40233					0.005820800653737024
TLMDMTLIT	9	Unmodified	_TLMDMTLIT_					0	0	0			REV__ENSG00000095380|ENST00000210444|NANS	REV__ENSG00000095380|ENST00000210444|NANS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	346.8434936404228	3	346.845178	1037.5137	-1.252	-0.00043424	-2.0637	-0.0007158	-3.3157	-0.00115	346.8442491887249	79.746	0.34187	79.746	79.545	79.887	0					32	10	5	0	0	0	0.75101	1	33218	33218		5.2969	0	1	1299200	+		34445	8926	16977	17052	40234	40234					-0.00355200977514869
TLMEEVLLL	9	Oxidation (M)	_TLM(Oxidation (M))EEVLLL_		TLM(1)EEVLLL		TLM(67)EEVLLL	0	0	1		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8001586794853	2	538.799026	1075.5835	1.6642	0.00089665	-2.8841	-0.0015539	-1.2199	-0.00065728	538.7988800456718	77.708	0.4034	77.708	77.502	77.905	0					34	12	4	0	0	0	0.051699	1	32351	32351		67.344	31.3	1	2434100			34446	1820	16978	17053	40235	40235		30			0.0487300096274339
TLMEEVLLL	9	Oxidation (M)	_TLM(Oxidation (M))EEVLLL_		TLM(1)EEVLLL		TLM(44)EEVLLL	0	0	1		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.2997314333916	2	538.799026	1075.5835	2.0718	0.0011163	-4.3248	-0.0023302	-2.253	-0.0012139	539.2974456918606	77.252	0.34417	77.569	77.387	77.732	0.31653					31	10	4	0	0	0	0.11478	2	32275	32275;32326		44.407	14.182	1	2054600			34447	1820	16978	17053	40236;40237	40236		30			0.0487300096274339
TLMEEVLLL	9	Oxidation (M)	_TLM(Oxidation (M))EEVLLL_		TLM(1)EEVLLL		TLM(44)EEVLLL	0	0	1		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.7991210818291	2	538.799026	1075.5835	1.9537	0.0010527	-2.0902	-0.0011262	-0.13649	-7.3542E-05	538.7979259669825	77.774	0.34598	78.091	77.888	78.234	0.31653					20	10	3	0	0	0	0.11478	1	32522	32522		44.407	19.733	1	984430			34448	1820	16978	17053	40238	40238		30			0.0487300096274339
TLMEEVLLL	9	Oxidation (M)	_TLM(Oxidation (M))EEVLLL_		TLM(1)EEVLLL		TLM(67)EEVLLL	0	0	1		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8008911013603	2	538.799026	1075.5835	2.7311	0.0014715	-1.9564	-0.0010541	0.77469	0.0004174	538.7981323442464	76.727	0.40642	78.02	77.792	78.199	1.2938					29	12	3	0	0	0	0.051699	1	32195	32195		67.344	31.3	1	1962700			34449	1820	16978	17053	40239	40239		30			0.0487300096274339
TLMEEVLLL	9	Oxidation (M)	_TLM(Oxidation (M))EEVLLL_		TLM(1)EEVLLL		TLM(48)EEVLLL	0	0	1		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.7997314333916	2	538.799026	1075.5835	2.8733	0.0015481	-3.6838	-0.0019848	-0.81052	-0.00043671	538.7974402296502	76.212	0.43935	77.979	77.751	78.19	1.7672					28	13	3	0	0	0	0.10294	1	31960	31960		48.346	12.302	1	1173000			34450	1820	16978	17053	40240	40240		30			0.0487300096274339
TLMEEVLLL	9	Unmodified	_TLMEEVLLL_					0	0	0		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8041259646416	2	530.801568	1059.58858	2.8195	0.0014966	3.0932	0.0016419	5.9127	0.0031385	530.8032751324466	95.1	0.45985	95.224	94.935	95.395	0.12331					34	14	3	0	0	0	0.028763	3	39774	39725;39774;39816		89.427	25.864	1	6183800			34451	1820	16978	17054	40241;40242;40243	40242					0.06117304825352221
TLMEEVLLL	9	Unmodified	_TLMEEVLLL_					0	0	0		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8038818240166	2	530.801568	1059.58858	4.2255	0.0022429	0.33597	0.00017833	4.5615	0.0024212	530.8017961935727	94.288	0.72044	95.029	94.733	95.454	0.74124					68	22	5	0	0	0	0.028763	4	39676	39629;39676;39727;39763		89.427	35.851	1	18855000			34452	1820	16978	17054	40244;40245;40246;40247	40245					0.06117304825352221
TLMEEVLLL	9	Unmodified	_TLMEEVLLL_					0	0	0		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1060.601855456829	1	1060.59586	1059.58858	4.7977	0.0050884	3.8314	0.0040636	8.6291	0.009152	1060.5988507944437	94.317	0.2479	95.059	94.919	95.167	0.74124					9	7	2	0	0	0	0.042029	1	39681	39681		74.423	16.951	1	4255400			34453	1820	16978	17054	40248	40248					0.06117304825352221
TLMEEVLLL	9	Unmodified	_TLMEEVLLL_					0	0	0		ENST00000479757.1_1_1:150667092-150667320:-|nuORF;nc|ENSG00000143457|Q9H4A5-2|GOLPH3L;ENSG00000143457|ENST00000271732|GOLPH3L;ENSG00000113384|ENST00000265070|GOLPH3	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	ENST00000479757.1_1_1:150667092-150667320:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8031494021416	2	530.801568	1059.58858	3.478	0.0018461	-0.36948	-0.00019612	3.1085	0.00165	530.8014841180027	93.781	0.75278	95.058	94.767	95.52	1.277					69	23	5	0	0	0	0.028763	5	39488	39412;39450;39488;39528;39570		89.427	29.037	1	14518000			34454	1820	16978	17054	40249;40250;40251;40252;40253	40251					0.06117304825352221
TLMGALKLNL	10	Unmodified	_TLMGALKLNL_					0	0	0		nc|ENSG00000158486|Q8TD57-3|DNAH3;DNAH3|p.L2088Pfs*41|1|0.69|ENSG00000158486|chr16:21000370-21000382|GGAAGGTGGAGAA/-|frameshift_variant;DNAH3|p.T2544Ifs*7|1|0.16|ENSG00000158486|chr16:20985111-20985112|-/A|frameshift_variant;ENSG00000158486|ENST00000698260|DNAH3;nc|ENSG00000158486|Q8TD57|DNAH3;ENST00000572640.5_1_16:21008599-21073979:-|nuORF	nc|ENSG00000158486|Q8TD57-3|DNAH3	nc|ENSG00000158486|Q8TD57-3|DNAH3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.8248168826103	2	537.323002	1072.63145	3.0481	0.0016378	-1.1866	-0.00063759	1.8615	0.0010002	537.3223542977913	61.869	0.15708	63.287	63.145	63.303	1.4177					6	4	2	0	0	0	0.12384	1	25918	25918		24.021	0	1	8535300			34455	415	16979	17055	40254	40254					0.09804119673435707
TLMNFNFH	8	Unmodified	_TLMNFNFH_					0	0	0		tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	tr|A0A553SSR3|A0A553SSR3_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03515PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	512.3507568240166	2	512.23947	1022.46439	2.1082	0.0010799	-0.79113	-0.00040525	1.3171	0.00067466	512.2390694109682	71.891	0.34421	73.233	73.091	73.435	1.3415					14	10	2	0	0	0	2.3239	1	30115	30115		2.0598	0	1	1186000			34456	16625	16980	17056	40255	40255					-0.045947281514600036
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7791015505791	2	494.778428	987.542302	1.5059	0.00074507	1.2488	0.00061789	2.7547	0.001363	494.7793375532052	75.842	0.47729	75.842	75.534	76.011	0					34	14	3	0	0	0	0.16044	1	31589	31589		53.833	13.875	1	1935600			34457	3507	16981	17057	40256	40256					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7794982790947	2	494.778428	987.542302	3.1274	0.0015474	-0.53895	-0.00026666	2.5885	0.0012807	494.77831787135574	75.373	0.50498	75.697	75.393	75.898	0.32464					31	15	3	0	0	0	0.073205	1	31518	31518		69.105	11.634	1	2414300			34458	3507	16981	17057	40257	40257					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	988.5527221560478	1	988.549579	987.542302	2.6095	0.0025797	2.8711	0.0028382	5.4807	0.0054179	988.5533773680872	75.405	0.44463	75.729	75.393	75.838	0.32464					17	13	2	0	0	0	0.63205	1	31521	31521		21.537	5.6898	1	804210			34459	3507	16981	17057	40258	40258					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7804748415947	2	494.778428	987.542302	3.3636	0.0016642	0.32402	0.00016032	3.6876	0.0018245	494.7789663485833	74.346	0.54856	75.664	75.31	75.859	1.318					49	17	4	0	0	0	0.058152	2	31165	31165;31218		92.653	23.548	1	8165900			34460	3507	16981	17057	40259;40260	40259					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	988.4699584841728	1	988.549579	987.542302	4.6868	0.0046331	2.8949	0.0028617	7.5817	0.0074948	988.5526116010636	74.314	0.23996	75.632	75.5	75.739	1.318					15	7	3	0	0	0	0.11498	1	31192	31192		45.7	13.394	1	1174400			34461	3507	16981	17057	40261	40261					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7795898318291	2	494.778428	987.542302	2.9984	0.0014835	0.51705	0.00025583	3.5154	0.0017394	494.7789192104319	73.842	0.64572	75.639	75.255	75.9	1.7962					54	20	4	0	0	0	0.048317	2	30995	30943;30995		85.642	25.568	1	5736300			34462	3507	16981	17057	40262;40263	40263					0.0480328471392113
TLMNLGGLAV	10	Unmodified	_TLMNLGGLAV_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	988.549579	987.542302	1.8326	0.0018116	5.4009	0.0053391	7.2335	0.0071507	988.5554782455616	75.717	0.41383	75.717	75.534	75.948	0	0.044701	0.0018555	NaN	79.596	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443640			34463	3507	16981	17057							0.0480328471392113
TLMNLGGLAVA	11	Unmodified	_TLMNLGGLAVA_					0	0	0		ENST00000478033.1_1_1:159889062-159890299:-|nuORF;ENSG00000158710|ENST00000368097|TAGLN2;nc|ENSG00000158710|P37802-2|TAGLN2	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	ENST00000478033.1_1_1:159889062-159890299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.2991821169853	2	530.296985	1058.57942	2.1939	0.0011634	-0.50196	-0.00026619	1.6919	0.00089722	530.2964306890901	72.773	0.32254	73.098	72.921	73.244	0.32494					15	9	2	0	0	0	0.66268	1	30444	30444		19.362	3.5148	1	716480			34464	3507	16982	17058	40264	40264					0.05246956259702529
TLMNLHVYI	9	Unmodified	_TLMNLHVYI_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.3017455935478	2	552.299527	1102.5845	1.3378	0.00073884	2.3528	0.0012994	3.6906	0.0020383	552.3002149298144	66.086	0.26054	66.086	65.992	66.253	0					11	7	2	0	0	0	0.53525	1	27537	27537		13.906	5.3128	1	588690			34465	1481	16983	17059	40265	40265					0.03731260122299318
TLMNLHVYI	9	Unmodified	_TLMNLHVYI_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.299527	1102.5845	1.8902	0.001044	-1.057	-0.00058377	0.83324	0.0004602	552.2985768232464	65.575	0.25307	65.902	65.707	65.96	0.32689	-0.091937	-0.0019984	NaN	13.906	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	673370			34466	1481	16983	17059							0.03731260122299318
TLNDLVQRL	9	Unmodified	_TLNDLVQRL_					0	0	0			REV__ENSG00000171403|ENST00000246662|KRT9	REV__ENSG00000171403|ENST00000246662|KRT9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1628906130791	2	536.31148	1070.60841	2.268	0.0012164	-0.89434	-0.00047965	1.3737	0.00073671	536.3105898679843	82.409	0.30675	82.689	82.52	82.827	0.2802					13	9	2	0	0	0	0.11908	1	34407	34407		2.0598	0	1	679750	+	+	34467	8382	16984	17060	40266	40266					0.07592816880332975
TLNFTITNL	9	Unmodified	_TLNFTITNL_					0	0	0		ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	518.3182250857353	2	518.787307	1035.56006	1.8592	0.00096452	-2.0792	-0.0010786	-0.21997	-0.00011412	518.7862360674468	78.994	0.36588	79.303	79.108	79.474	0.30933					20	11	2	0	0	0	0.08828	1	32999	32999		21.747	0	1	2070900			34468	4569	16985	17061	40267	40267					0.04370323240414109
TLNHKSWDW	9	Unmodified	_TLNHKSWDW_					0	0	0			REV__nc|ENSG00000171105|P06213-2|INSR	REV__nc|ENSG00000171105|P06213-2|INSR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	593.1598998904228	2	593.78563	1185.55671	1.9914	0.0011824	0.77285	0.0004589	2.7642	0.0016413	593.785885148029	72.631	0.85335	72.631	72.173	73.027	0					40	26	2	0	0	0	0.11908	1	30371	30371		2.0598	0	1	416330	+		34469	11009	16986	17062	40268	40268					-0.02864926813595048
TLNKLKLIL	9	Unmodified	_TLNKLKLIL_					0	0	0		tr|A0A7D7AHC9|A0A7D7AHC9_9CLOTBifunctionalNAD(P)H-hydraterepairenzymeOS=ClostridiumintestinaleOX=36845GN=nnrEPE=3SV=1	tr|A0A7D7AHC9|A0A7D7AHC9_9CLOTBifunctionalNAD(P)H-hydraterepairenzymeOS=ClostridiumintestinaleOX=36845GN=nnrEPE=3SV=1	tr|A0A7D7AHC9|A0A7D7AHC9_9CLOTBifunctionalNAD(P)H-hydraterepairenzymeOS=ClostridiumintestinaleOX=36845GN=nnrEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3652221560478	2	528.362985	1054.71142	4.1657	0.002201	-0.096544	-5.101E-05	4.0692	0.00215	528.3629743920887	92.481	0.68558	93.417	93.082	93.768	0.93624					55	20	4	0	0	0	0.083604	2	38936	38936;38976		54.774	0	1	5612700			34470	17345	16987	17063	40269;40270	40269					0.1862492933894373
TLNKRFEC	8	Unmodified	_TLNKRFEC_					0	0	0			REV__nc|ENSG00000132554|Q8NE09-3|RGS22	REV__nc|ENSG00000132554|Q8NE09-3|RGS22	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.5075561404228	3	337.507777	1009.5015	-1.3873	-0.00046823	1.0419	0.00035165	-0.3454	-0.00011657	337.50802505655776	92.788	0.54562	92.788	92.53	93.076	0					39	17	3	0	0	0	0.8577	1	38812	38812		16.149	0	1	3478300	+		34471	9850	16988	17064	40271	40271					-0.0028705660570267355
TLNLRMEEMGN	11	Unmodified	_TLNLRMEEMGN_					0	0	0		ENSG00000226742|ENST00000451882|HSBP1L1	ENSG00000226742|ENST00000451882|HSBP1L1	ENSG00000226742|ENST00000451882|HSBP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.3091308474541	2	654.307755	1306.60096	4.8491	0.0031728	-2.1486	-0.0014058	2.7005	0.0017669	654.3063797254212	89.669	0.4977	90.689	90.397	90.894	1.0199					50	15	5	0	0	0	0.37492	2	37777	37777;37816		27.629	9.4825	1	16988000			34472	5296	16989	17065	40272;40273	40272					-0.040080267739085684
TLNLRMEEMGN	11	Unmodified	_TLNLRMEEMGN_					0	0	0		ENSG00000226742|ENST00000451882|HSBP1L1	ENSG00000226742|ENST00000451882|HSBP1L1	ENSG00000226742|ENST00000451882|HSBP1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	654.3112060427666	2	654.307755	1306.60096	4.6602	0.0030492	-2.5419	-0.0016632	2.1184	0.0013861	654.3060998566548	89.225	0.466	90.629	90.425	90.891	1.4045					47	14	5	0	0	0	0.58697	3	37547	37547;37594;37648		21.537	8.4945	1	16857000			34473	5296	16989	17065	40274;40275;40276	40274					-0.040080267739085684
TLNNKNIVL	9	Unmodified	_TLNNKNIVL_					0	0	0		tr|A0A553ST35|A0A553ST35_NIACIYdhG-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04205PE=4SV=1	tr|A0A553ST35|A0A553ST35_NIACIYdhG-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04205PE=4SV=1	tr|A0A553ST35|A0A553ST35_NIACIYdhG-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8101074099541	2	514.808574	1027.60259	2.1235	0.0010932	0.062985	3.2425E-05	2.1865	0.0011256	514.8085899200595	42.343	0.3203	43.683	43.476	43.796	1.3399					17	9	2	0	0	0	0.20671	1	17746	17746		32.305	1.6689	1	1181000			34474	16636	16990	17066	40277	40277					0.08989718368638933
TLNNLEIFL	9	Unmodified	_TLNNLEIFL_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8047363162041	2	538.802957	1075.59136	2.5553	0.0013768	1.718	0.00092566	4.2733	0.0023025	538.8037950704972	86.744	0.4221	86.744	86.489	86.911	0					34	15	3	0	0	0	0.083604	1	36164	36164		54.774	14.816	1	6770100			34475	1949	16991	17067	40278	40278					0.05658896274530889
TLNNLEIFL	9	Unmodified	_TLNNLEIFL_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	538.802957	1075.59136	2.6232	0.0014134	3.8995	0.002101	6.5227	0.0035145	538.8048416514839	86.627	0.38796	86.871	86.665	87.053	0.24387	0.063591	0.0012655	NaN	54.774	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5704200			34476	1949	16991	17067							0.05658896274530889
TLNNRKRH	8	Unmodified	_TLNNRKRH_					0	0	0			REV__ENSG00000174173|ENST00000309922|TRMT10C	REV__ENSG00000174173|ENST00000309922|TRMT10C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1406127810478	2	519.799406	1037.58426	2.0109	0.0010453	3.0643	0.0015928	5.0752	0.0026381	519.801003370883	53.585	0.31368	53.908	53.756	54.07	0.32283					15	9	2	0	0	0	2.3239	1	22413	22413		4.756	0.42677	1	820230	+		34477	11117	16992	17068	40279	40279					0.06697021237323497
TLNRDSVIVP	10	Unmodified	_TLNRDSVIVP_					0	0	0			REV__ENST00000460518.1_1_6:133108648-133118195:-|nuORF	REV__ENST00000460518.1_1_6:133108648-133118195:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	558.0654174685478	2	557.316763	1112.61897	1.3348	0.00074392	4.2648	0.0023768	5.5996	0.0031207	557.3193198276668	56.699	0.61088	56.699	56.256	56.866	0					28	20	2	0	0	0	0.12533	1	23493	23493		5.7319	2.1354	1	1017100	+		34478	13187	16993	17069	40280	40280					0.06716799534774509
TLNRLKDAP	9	Unmodified	_TLNRLKDAP_					0	0	0		ENSG00000124091|ENST00000243913|GCNT7;nc|ENSG00000124091|Q6ZNI0|GCNT7	ENSG00000124091|ENST00000243913|GCNT7	ENSG00000124091|ENST00000243913|GCNT7	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2977783083916	2	514.298373	1026.58219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.16	1	80.461	79.961	80.961	0.30047								0	0	0	0.42693	1	33510	33510		1.8442	0	1				34479	2204	16994	17070	40281	40281					0.06996547708831713
TLNRQLTFEL	10	Unmodified	_TLNRQLTFEL_					0	0	0			REV__ENST00000487863.5_1_19:53057832-53058279:+|nuORF	REV__ENST00000487863.5_1_19:53057832-53058279:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	617.8478881716728	2	617.843145	1233.67174	2.9958	0.001851	2.7564	0.001703	5.7522	0.003554	617.8446278973929	86.564	0.38892	86.564	86.308	86.697	0					18	12	2	0	0	0	0.65659	2	36030	36030;36086		20.415	1.0526	1	783520	+		34480	13405	16995	17071	40282;40283	40282					0.06424757597551434
TLNRQLTFEL	10	Unmodified	_TLNRQLTFEL_					0	0	0			REV__ENST00000487863.5_1_19:53057832-53058279:+|nuORF	REV__ENST00000487863.5_1_19:53057832-53058279:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	617.843145	1233.67174	2.9958	0.001851	2.7564	0.001703	5.7522	0.003554	617.8446278973929	86.564	0.38892	86.564	86.308	86.697	0	0	0	NaN	20.415	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	783520	+		34481	13405	16995	17071							0.06424757597551434
TLNRRRRRGA	10	Unmodified	_TLNRRRRRGA_					0	0	0			REV__nc|ENSG00000164877|Q8IY33-2|MICALL2	REV__nc|ENSG00000164877|Q8IY33-2|MICALL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3836547732353	2	628.38196	1254.74937	2.3591	0.0014824	1.0037	0.00063074	3.3628	0.0021131	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.89803	1	32766	32766		1.4819	0	1	7119900	+		34482	14475	16996	17072	40284	40284					0.13218253096965782
TLNRYNQWLKR	11	Unmodified	_TLNRYNQWLKR_					0	0	0			REV__ENSG00000141569|ENST00000269383|TRIM65	REV__ENSG00000141569|ENST00000269383|TRIM65	MSMS	GG20161007_CRH_Patient100_W632_02	4	746.1549560427666	2	746.412592	1490.81063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.431	1	96.737	96.237	97.237	0.3062								0	0	0	0.63775	1	40565	40565		5.7319	2.4505	1		+		34483	10159	16997	17073	40285	40285					0.08485720285716525
TLNSFKKQL	9	Unmodified	_TLNSFKKQL_					0	0	0		tr|A0A7D6ZFM1|A0A7D6ZFM1_9CLOTRodshape-determiningproteinRodAOS=ClostridiumintestinaleOX=36845GN=rodAPE=4SV=1	tr|A0A7D6ZFM1|A0A7D6ZFM1_9CLOTRodshape-determiningproteinRodAOS=ClostridiumintestinaleOX=36845GN=rodAPE=4SV=1	tr|A0A7D6ZFM1|A0A7D6ZFM1_9CLOTRodshape-determiningproteinRodAOS=ClostridiumintestinaleOX=36845GN=rodAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8192016482353	2	539.816399	1077.61824	2.6334	0.0014215	-1.8721	-0.0010106	0.76123	0.00041092	539.8161264720868	61.593	0.78631	63.55	63.305	64.091	1.9571					55	24	3	0	0	0	0.27148	1	25931	25931		26.884	6.43	1	3188200			34484	17063	16998	17074	40286	40286					0.0825400488570267
TLNSSKKKGL	10	Unmodified	_TLNSSKKKGL_					0	0	0			REV__nc|ENSG00000134900|P29144|TPP2	REV__nc|ENSG00000134900|P29144|TPP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	538.8008911013603	2	538.327131	1074.63971	3.0129	0.0016219	-0.96722	-0.00052068	2.0457	0.0011012	538.3256708523464	84.956	0.57192	86.553	86.25	86.822	1.5962					47	21	3	0	0	0	0.12525	1	35558	35558		6.7232	1.4925	1	53984000	+		34485	9923	16999	17075	40287	40287					0.10537389914429696
TLNYISVLN	9	Unmodified	_TLNYISVLN_					0	0	0			REV__sp|Q6SW85|ITP_HCMVMInnertegumentproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL47PE=3SV=1	REV__sp|Q6SW85|ITP_HCMVMInnertegumentproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL47PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.7872192263603	2	518.787307	1035.56006	1.4266	0.00074011	-2.8165	-0.0014612	-1.3899	-0.00072106	518.7857256742	77.666	0.54892	79.417	78.977	79.526	1.7514					31	17	3	0	0	0	0.27148	1	32610	32610		26.884	0	1	6909800	+		34486	14658	17000	17076	40288	40288					0.043703232404368464
TLPGWTELI	9	Unmodified	_TLPGWTELI_					0	0	0			REV__ENST00000545932.5_1_12:108958067-108958157:+|nuORF	REV__ENST00000545932.5_1_12:108958067-108958157:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2846557497978	2	515.2844	1028.55425	2.1887	0.0011278	-1.1176	-0.0005759	1.071	0.00055189	515.2837909263026	67.733	0.57523	69.111	68.819	69.394	1.3778					32	18	2	0	0	0	0.46905	2	28439	28439;28502		16.942	2.104	1	18939000	+		34487	13805	17001	17077	40289;40290	40289					0.04111224728740126
TLPIVAAP	8	Unmodified	_TLPIVAAP_					0	0	0			REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	REV__ENST00000357037.5_1_17:40556259-40556487:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	391.2444946169853	2	391.244547	780.47454	1.8142	0.00070981	-2.2783	-0.00089138	-0.4641	-0.00018157	391.24386304371495	78.253	0.47904	78.562	78.259	78.738	0.30932					29	14	3	0	0	0	0.89176	1	32712	32712		0.79363	0	1	3583900	+		34488	12556	17002	17078	40291	40291					0.07552202845408829
TLPKLFQKKKR	11	Unmodified	_TLPKLFQKKKR_					0	0	0			REV__ENST00000316077.13_1_X:135312567-135312624:-|nuORF	REV__ENST00000316077.13_1_X:135312567-135312624:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	693.6214477419853	2	693.950821	1385.88709	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.01	1	113.16	112.66	113.66	0.14912								0	0	0	0.63775	1	48941	48941		2.9952	1.6657	1		+		34489	12388	17003	17079	40292	40292					0.20958143852999456
TLPLKKHR	8	Unmodified	_TLPLKKHR_					0	0	0			REV__ENST00000575447.1_1_16:24979927-25026645:-|nuORF	REV__ENST00000575447.1_1_16:24979927-25026645:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.8209106326103	2	496.821818	991.629084	1.7741	0.00088139	-2.2563	-0.001121	-0.48222	-0.00023958	496.8207092466822	42.665	1.0345	44.587	44.227	45.262	1.9211					41	33	2	0	0	0	0.89008	1	17887	17887		2.5775	0.51773	1	2203700	+		34490	8136	17004	17080	40293	40293					0.13293452050641008
TLPLLSPTTF	10	Unmodified	_TLPLLSPTTF_					0	0	0		tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3185912966728	2	545.313158	1088.61176	2.2452	0.0012243	0.39829	0.00021719	2.6435	0.0014415	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.81324	2	30267	30267;30309		10.824	3.5347	1	12778000			34491	16056	17005	17081	40294;40295	40294					0.0710006693429932
TLPLQDRELG	10	Unmodified	_TLPLQDRELG_					0	0	0		ENST00000545777.1_1_11:67223622-67225073:+|nuORF;nc|ENSG00000175544|P57796-2|CABP4	ENST00000545777.1_1_11:67223622-67225073:+|nuORF	ENST00000545777.1_1_11:67223622-67225073:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	571.3136474490166	2	571.31422	1140.61389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.875	1	95.616	95.116	96.116	0.74124								0	0	0	0.6561	1	39912	39912		8.7454	0	1				34492	7238	17006	17082	40296	40296					0.0492049567212689
TLPNLVILNEL	11	Unmodified	_TLPNLVILNEL_					0	0	0			REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	REV__nc|ENSG00000183230|Q9UI47-2|CTNNA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8695556521416	2	619.871371	1237.72819	1.4221	0.00088151	-2.3074	-0.0014303	-0.88533	-0.00054879	619.8696314575934	78.103	1.7295	79.854	79.009	80.738	1.7514					146	55	4	0	0	0	0.96543	1	32547	32547		10.8	5.9025	1	7012900	+		34493	11381	17007	17083	40297	40297					0.11883385434225602
TLPPLLGFSF	10	Unmodified	_TLPPLLGFSF_					0	0	0		ENST00000459862.1_1_1:205499484-205500503:+|nuORF	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.7507202029228	2	546.310418	1090.60628	1.8967	0.0010362	-0.21015	-0.00011481	1.6865	0.00092137	546.3100213737628	67.776	0.34002	69.646	69.427	69.767	1.87					14	10	2	0	0	0	0.1245	1	28393	28393		6.7232	1.9672	1	879540			34494	6662	17008	17084	40298	40298					0.06460388142522788
TLPPLLGFSF	10	Unmodified	_TLPPLLGFSF_					0	0	0		ENST00000459862.1_1_1:205499484-205500503:+|nuORF	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	ENST00000459862.1_1_1:205499484-205500503:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	546.310418	1090.60628	1.3695	0.00074817	-1.6607	-0.00090727	-0.29123	-0.0001591	546.3101729514427	69.39	0.25311	69.712	69.594	69.847	0.32223	0.029546	-0.0013878	NaN	3.5965	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	427090			34495	6662	17008	17084							0.06460388142522788
TLPTVNQWV	9	Unmodified	_TLPTVNQWV_					0	0	0			REV__nc|ENSG00000156103|P51512-2|MMP16	REV__nc|ENSG00000156103|P51512-2|MMP16	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	529.7808105349541	2	529.287474	1056.5604	2.1741	0.0011507	-1.0796	-0.0005714	1.0945	0.00057931	529.2874642710427	65.983	0.51208	67.381	67.034	67.546	1.3989					28	16	3	0	0	0	0.10591	1	27553	27553		1.8442	0	1	1042800	+		34496	10508	17009	17085	40299	40299					0.034377429602727716
TLPTVNQWV	9	Unmodified	_TLPTVNQWV_					0	0	0			REV__nc|ENSG00000156103|P51512-2|MMP16	REV__nc|ENSG00000156103|P51512-2|MMP16	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	529.287474	1056.5604	1.748	0.00092521	-3.0556	-0.0016173	-1.3075	-0.00069205	529.2851484688545	67.616	0.25349	67.616	67.504	67.758	0	0.11733	-0.00028479	NaN	1.8442	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456730	+		34497	10508	17009	17085							0.034377429602727716
TLQDHNNII	9	Unmodified	_TLQDHNNII_					0	0	0		ENST00000345317.6_1_7:26706920-26707058:-|nuORF	ENST00000345317.6_1_7:26706920-26707058:-|nuORF	ENST00000345317.6_1_7:26706920-26707058:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.2830688357353	2	534.277638	1066.54072	3.446	0.0018411	2.0666	0.0011041	5.5126	0.0029453	534.2787179037053	74.281	0.75774	75.599	75.374	76.132	1.318					61	24	3	0	0	0	0.079895	1	31142	31142		56.177	6.244	1	7134100			34498	5961	17010	17086	40300	40300					0.010113669495240174
TLQDIVYKL	9	Unmodified	_TLQDIVYKL_					0	0	0		ENST00000456675.2_1_10:22615378-22616584:+|nuORF;PCGF2-CISD3|1|fusion;PCGF2|p.V259Lfs*53|1|0.65|ENSG00000277258|chr17:38735463-38735484|GCTGGGAGCCTTGTCGCTGACT/-|frameshift_variant;ENSG00000168283|ENST00000376663|BMI1;ENSG00000277258|ENST00000620225|PCGF2	ENST00000456675.2_1_10:22615378-22616584:+|nuORF	ENST00000456675.2_1_10:22615378-22616584:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.7814819216728	2	546.818607	1091.62266	0.8153	0.00044582	-0.562	-0.00030731	0.2533	0.00013851	546.8180045252892	58.504	0.34476	59.922	59.722	60.067	1.4181					20	10	2	0	0	0	0.058421	1	24510	24510		45.7	15.063	1	2736000			34499	4027	17011	17087	40301	40301					0.08051469308588821
TLQDIVYKL	9	Unmodified	_TLQDIVYKL_					0	0	0		ENST00000456675.2_1_10:22615378-22616584:+|nuORF;PCGF2-CISD3|1|fusion;PCGF2|p.V259Lfs*53|1|0.65|ENSG00000277258|chr17:38735463-38735484|GCTGGGAGCCTTGTCGCTGACT/-|frameshift_variant;ENSG00000168283|ENST00000376663|BMI1;ENSG00000277258|ENST00000620225|PCGF2	ENST00000456675.2_1_10:22615378-22616584:+|nuORF	ENST00000456675.2_1_10:22615378-22616584:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8183471560478	2	546.818607	1091.62266	0.69717	0.00038122	-0.95213	-0.00052064	-0.25496	-0.00013942	546.8173566006598	57.943	0.41914	59.912	59.729	60.148	1.969					20	13	2	0	0	0	0.099302	1	24305	24305		49.554	11.379	1	1689100			34500	4027	17011	17087	40302	40302					0.08051469308588821
TLQERRRMKRR	11	Unmodified	_TLQERRRMKRR_					0	0	0		ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	ENST00000257749.8_2_6:90661229-90661412:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.9703857302666	3	510.635437	1528.88448	3.7133	0.0018961	-2.8555	-0.0014581	0.85776	0.000438	510.9680797339018	91.317	1.5483	92.683	91.961	93.509	1.366					72	48	2	0	0	0	1.0402	1	38522	38522		0.094841	0.094841	1	2024500			34501	5607	17012	17088	40303	40303					0.14119365176406973
TLQEVLLTV	9	Unmodified	_TLQEVLLTV_					0	0	0		ENSG00000100450|ENST00000216338|GZMH	ENSG00000100450|ENST00000216338|GZMH	ENSG00000100450|ENST00000216338|GZMH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.3057128787041	2	508.305332	1014.59611	2.5518	0.0012971	2.546	0.0012941	5.0978	0.0025912	508.3067297129687	89.824	0.31789	89.824	89.714	90.032	0					12	9	2	0	0	0	0.68551	1	37605	37605		7.9102	0	1	663600			34502	1281	17013	17089	40304	40304					0.08939780417279053
TLQFHSSLI	9	Unmodified	_TLQFHSSLI_					0	0	0			REV__nc|ENSG00000176058|Q4KMQ1-3|TPRN	REV__nc|ENSG00000176058|Q4KMQ1-3|TPRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.577197253704	1	1045.56767	1044.5604	3.2021	0.003348	-1.3543	-0.001416	1.8479	0.0019321	1045.5667192695546	74.288	0.51163	75.606	75.405	75.917	1.318					47	16	4	0	0	0	0.098163	1	31128	31128		49.933	0.26408	1	11690000	+		34503	14494	17014	17090	40305	40305					0.039897429602888224
TLQGLEIEL	9	Unmodified	_TLQGLEIEL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;CON__A2A4G1;ENST00000557173.1_1_12:95228580-95228931:+|nuORF;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2872497439384	2	508.28714	1014.55973	2.0449	0.0010394	-0.23648	-0.0001202	1.8084	0.00091918	508.2868589090043	74.219	0.35218	74.219	74.047	74.399	0					22	10	3	0	0	0	0.04145	1	30898	30898		74.929	13.572	1	1516800		+	34504	344;346	17015	17091	40306	40306					0.05302903520566815
TLQGLEIEL	9	Unmodified	_TLQGLEIEL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;CON__A2A4G1;ENST00000557173.1_1_12:95228580-95228931:+|nuORF;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2873107790947	2	508.28714	1014.55973	2.6315	0.0013375	-0.90438	-0.00045968	1.7271	0.00087785	508.2868524685026	73.764	0.38388	74.089	73.881	74.265	0.32494					20	11	2	0	0	0	0.033794	2	30877	30830;30877		81.613	3.912	1	2122300		+	34505	344;346	17015	17091	40307;40308	40308					0.05302903520566815
TLQGLEIEL	9	Unmodified	_TLQGLEIEL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;CON__A2A4G1;ENST00000557173.1_1_12:95228580-95228931:+|nuORF;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1	ENSG00000171345|ENST00000361566|KRT19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1015.573657214642	1	1015.567	1014.55973	2.6821	0.0027238	2.8702	0.0029149	5.5522	0.0056387	1015.5688105222853	72.216	0.30653	74.026	73.861	74.167	1.8101					16	9	2	0	0	0	0.0058174	1	30285	30285		118.89	7.6077	1	1658600		+	34506	344;346	17015	17091	40309	40309					0.05302903520566815
TLQGLEIEL	9	Unmodified	_TLQGLEIEL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;CON__A2A4G1;ENST00000557173.1_1_12:95228580-95228931:+|nuORF;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1	ENSG00000171345|ENST00000361566|KRT19	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	508.28714	1014.55973	3.5631	0.0018111	-0.38092	-0.00019361	3.1821	0.0016174	508.2869699464892	72.742	0.49493	74.072	73.762	74.257	1.3298	-0.029718	0.00020565	NaN	81.613	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4235700		+	34507	344;346	17015	17091							0.05302903520566815
TLQGLEIEL	9	Unmodified	_TLQGLEIEL_					0	0	0		ENSG00000171345|ENST00000361566|KRT19;CON__P08727;ENST00000468880.1_1_17:39680334-39681232:-|nuORF;CON__P19001;ENST00000471565.2_1_17:39680334-39680852:-|nuORF;CON__A2A4G1;ENST00000557173.1_1_12:95228580-95228931:+|nuORF;ENST00000468313.5_1_17:39657932-39661743:-|nuORF;CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1	ENSG00000171345|ENST00000361566|KRT19;CON__P08730-1	ENSG00000171345|ENST00000361566|KRT19	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.28714	1014.55973	2.8668	0.0014571	-0.67727	-0.00034425	2.1895	0.0011129	508.2868133463357	72.216	0.51952	74.026	73.742	74.261	1.8101	-0.07489	-9.5617E-05	NaN	81.613	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5872100		+	34508	344;346	17015	17091							0.05302903520566815
TLQPLELRLQC	11	Unmodified	_TLQPLELRLQC_					0	0	0			REV__ENST00000529652.1_1_17:80551717-80553973:+|nuORF	REV__ENST00000529652.1_1_17:80551717-80553973:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	657.6556274294853	2	657.36593	1312.71731	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.383	1	95.785	95.285	96.285	0.40208								0	0	0	0.63775	1	40132	40132		6.1918	0.46	1		+		34509	13692	17016	17092	40310	40310					0.0734565978827959
TLQPLQKSI	9	Unmodified	_TLQPLQKSI_					0	0	0			REV__ENSG00000198793|ENST00000361445|MTOR	REV__ENSG00000198793|ENST00000361445|MTOR	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.2123596072197	3	343.209725	1026.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.25	1	100.45	99.95	100.95	0.20527								0	0	0	0.42693	1	42157	42157		1.0715	0.10919	1		+		34510	11737	17017	17093	40311	40311					0.09510602511409161
TLQQRRAF	8	Unmodified	_TLQQRRAF_					0	0	0			REV__ENST00000443602.2_1:149673167-149673347:+|nuORF	REV__ENST00000443602.2_1:149673167-149673347:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	510.7613708376884	2	510.290882	1018.56721	3.0259	0.0015441	-2.7078	-0.0013818	0.31802	0.00016228	510.2890196099904	75.776	0.23578	77.544	77.391	77.627	1.7672					11	7	2	0	0	0	2.3239	1	31767	31767		5.7604	0	1	569080	+		34511	13096	17018	17094	40312	40312					0.05867100631519406
TLQRSLLFY	9	Unmodified	_TLQRSLLFY_					0	0	0		ENST00000561228.1_1_14:102843052-102891354:+|nuORF;TECPR2|p.S415Lfs*18|1|0.15|ENSG00000196663|chr14:102431952-102431953|-/T|frameshift_variant;TECPR2|p.S766Pfs*6|1|0.06|ENSG00000196663|chr14:102435113-102435113|T/-|frameshift_variant;nc|ENSG00000196663|O15040-2|TECPR2;ENSG00000196663|ENST00000359520|TECPR2	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	ENST00000561228.1_1_14:102843052-102891354:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8856384158134	3	380.885241	1139.63389	0.9506	0.00036207	0.95798	0.00036488	1.9086	0.00072695	380.8856156694533	50.441	0.91043	52.416	51.786	52.697	1.9753					90	29	4	0	0	0	0.74835	1	21147	21147		5.4027	0.35519	1	14245000			34512	4957	17019	17095	40313	40313					0.06966291402773095
TLQTWLVQA	9	Unmodified	_TLQTWLVQA_					0	0	0		nc|ENSG00000134352|P40189-3|IL6ST;ENSG00000134352|ENST00000381298|IL6ST;nc|ENSG00000134352|P40189-2|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2958251833916	2	530.295299	1058.57605	1.8638	0.00098839	-0.043528	-2.3083E-05	1.8203	0.00096531	530.2950988758995	65.421	0.31922	65.421	65.227	65.546	0					23	9	3	0	0	0	0.30098	1	27248	27248		25.399	14.575	1	967570			34513	2612	17020	17096	40314	40314					0.049100294773325004
TLQTWLVQA	9	Unmodified	_TLQTWLVQA_					0	0	0		nc|ENSG00000134352|P40189-3|IL6ST;ENSG00000134352|ENST00000381298|IL6ST;nc|ENSG00000134352|P40189-2|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	nc|ENSG00000134352|P40189-3|IL6ST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.2968627810478	2	530.295299	1058.57605	2.0446	0.0010843	0.056085	2.9742E-05	2.1007	0.001114	530.2949173558286	64.943	0.35107	65.27	65.069	65.42	0.32689					24	10	3	0	0	0	0.22154	2	27182	27182;27237		30.637	5.2372	1	1309500			34514	2612	17020	17096	40315;40316	40315					0.049100294773325004
TLQVGTGFSF	10	Unmodified	_TLQVGTGFSF_					0	0	0		chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7711059451103	2	528.771657	1055.52876	0.41719	0.0002206	-1.8168	-0.00096066	-1.3996	-0.00074006	528.7696126948254	55.106	0.14088	57.074	56.988	57.129	1.9684					7	4	2	0	0	0	0.75645	1	23105	23105		15.847	0	1	2351400			34515	282	17021	17097	40317	40317					0.003217502063534994
TLQVGTGFSF	10	Unmodified	_TLQVGTGFSF_					0	0	0		chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	chr7:29092702-29093064|204|18.96|0.41|5.52|-|0|CPVL,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	528.771657	1055.52876	1.0734	0.00056757	-1.5485	-0.00081878	-0.47509	-0.00025121	528.7703961933587	55.513	0.14381	56.922	56.822	56.966	1.4099	-0.075947	8.021E-05	NaN	15.847	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	993630			34516	282	17021	17097							0.003217502063534994
TLRALALL	8	Unmodified	_TLRALALL_					0	0	0			REV__ENST00000448668.2_1_3:129200375-129202705:+|nuORF	REV__ENST00000448668.2_1_3:129200375-129202705:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	870.5792724490166	1	870.577114	869.569838	3.1375	0.0027314	-1.0571	-0.00092028	2.0804	0.0018111	870.5762135699317	107.02	0.16764	107.18	107.08	107.25	0.16174					16	7	3	0	0	0	0.89176	1	45884	45884		0.79363	0	1	25622000	+		34517	13114	17022	17098	40318	40318					0.12983556036454047
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2514221072197	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.383	1	75.383	74.883	75.883	0								0	0	0	0.63775	1	31383	31383		1.2148	0	1		+		34518	8089	17023	17099	40319	40319					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2511169314384	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.44	1	70.762	70.262	71.262	0.32224								0	0	0	0.63775	1	29487	29487		1.2148	0	1		+		34519	8089	17023	17099	40320	40320					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509338259697	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.322	1	71.645	71.145	72.145	0.32359								0	0	0	0.63775	1	29850	29850		1.2148	0	1		+		34520	8089	17023	17099	40321	40321					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2519409060478	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.236	1	97.327	96.827	97.827	0.090881								0	0	0	0.63775	1	40688	40688		1.2148	0	1		+		34521	8089	17023	17099	40322	40322					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509948611259	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.701	1	62.121	61.621	62.621	1.4196								0	0	0	0.63775	1	25459	25459		1.2148	0	1		+		34522	8089	17023	17099	40323	40323					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2510253787041	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.339	1	69.717	69.217	70.217	1.3778								0	0	0	0.63775	1	28675	28675		1.2148	0	1		+		34523	8089	17023	17099	40324	40324					0.14403109016689086
TLRALLEAPVL	11	Unmodified	_TLRALLEAPVL_					0	0	0			REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	REV__ADGRG5|p.P247R|1|0.36|ENSG00000159618|chr16:57567510-57567510|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2496520876884	3	399.251813	1194.73361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.537	1	37.355	36.855	37.855	1.8176								0	0	0	0.63775	1	14903	14903		1.2148	0	1		+		34524	8089	17023	17099	40325	40325					0.14403109016689086
TLRASYEE	8	Unmodified	_TLRASYEE_					0	0	0		ENST00000569504.5_1_16:67859786-67861483:+|nuORF;ENST00000466164.5_1_16:67859786-67861893:+|nuORF;ENST00000568990.5_1_16:67859786-67861893:+|nuORF;nc|ENSG00000102904|Q2TAA8|TSNAXIP1;ENSG00000102904|ENST00000561639|TSNAXIP1	ENST00000569504.5_1_16:67859786-67861483:+|nuORF	ENST00000569504.5_1_16:67859786-67861483:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	323.4940673708916	3	323.494301	967.461075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.304	1	99.501	99.001	100	0.19767								0	0	0	1.0178	1	41805	41805		1.4819	0	1				34525	1402	17024	17100	40326	40326					-0.023956997244795275
TLRERLRKTRF	11	Unmodified	_TLRERLRKTRF_					0	0	0		nc|ENSG00000156384|Q86XK3-3|SFR1;ENSG00000156384|ENST00000369727|SFR1;nc|ENSG00000156384|Q86XK3-2|SFR1	nc|ENSG00000156384|Q86XK3-3|SFR1	nc|ENSG00000156384|Q86XK3-3|SFR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.6365539431572	3	492.635431	1474.88446	5.4324	0.0026762	-1.6765	-0.00082592	3.7559	0.0018503	492.6344348167474	88.124	1.4719	89.181	88.639	90.111	1.0562					103	45	4	0	0	0	1.0395	1	37201	37201		0.08335	0	1	2320000			34526	3447	17025	17101	40327	40327					0.1660168844805412
TLRFRQILKKI	11	Unmodified	_TLRFRQILKKI_					0	0	0		ENSG00000100554|ENST00000216442|ATP6V1D;ENST00000557244.1_1_14:67819633-67826415:-|nuORF;ENST00000555335.1_1_14:67815736-67826415:-|nuORF	ENSG00000100554|ENST00000216442|ATP6V1D	ENSG00000100554|ENST00000216442|ATP6V1D	MSMS	GG20161007_CRH_Patient100_W632_01	3	708.4655639529228	2	708.464096	1414.91364	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.015	1	98.242	97.742	98.742	0.22776								0	0	0	0.63775	1	41250	41250		1.3295	0	1				34527	1286	17026	17102	40328	40328					0.22277832744362058
TLRFRVQRRQR	11	Unmodified	_TLRFRVQRRQR_					0	0	0			REV__ENST00000491407.1_1_7:100033387-100034048:-|nuORF	REV__ENST00000491407.1_1_7:100033387-100034048:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	758.4564086794853	2	758.458199	1514.90185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.158	1	96.56	96.06	97.06	0.40208								0	0	0	0.63775	1	40451	40451		1.3295	1.0225	1		+		34528	10614	17027	17103	40329	40329					0.16499028773728242
TLRILLRI	8	Unmodified	_TLRILLRI_					0	0	0			REV__nc|ENSG00000148082|Q92529-2|SHC3	REV__nc|ENSG00000148082|Q92529-2|SHC3	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3487121462822	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.742	1	92.91	92.41	93.41	0.16835								0	0	0	1.0178	1	38836	38836		0.79363	0	1		+		34529	14457	17028	17104	40330	40330					0.18231195744544948
TLRLDVEAL	9	Unmodified	_TLRLDVEAL_					0	0	0		ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	ENSG00000113262|ENST00000517717|GRM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3016845583916	2	515.300581	1028.58661	2.512	0.0012944	-0.36514	-0.00018816	2.1469	0.0011063	515.3006741014718	45.362	0.35684	46.728	46.53	46.887	1.3653					26	10	3	0	0	0	0.27148	1	19026	19026		26.884	0.54238	1	3483100			34530	1813	17029	17105	40331	40331					0.07346012131756652
TLRLKFKKLLR	11	Unmodified	_TLRLKFKKLLR_					0	0	0			REV__tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	REV__tr|A0A553SQS7|A0A553SQS7_NIACILAGLIDADGhomingendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_07200PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	708.4845458865166	2	708.482289	1414.95002	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.956	1	97.241	96.741	97.741	0.28442								0	0	0	0.63775	1	40795	40795		1.3295	0	1		+		34531	15135	17030	17106	40332	40332					0.2591470964105156
TLRLKRRSLI	10	Unmodified	_TLRLKRRSLI_					0	0	0		ENST00000395824.5_1_17:16471178-16472262:-|nuORF	ENST00000395824.5_1_17:16471178-16472262:-|nuORF	ENST00000395824.5_1_17:16471178-16472262:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	627.9358398318291	2	628.419688	1254.82482	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.085	1	97.369	96.869	97.869	0.28442								0	0	0	0.66166	1	40849	40849		1.6526	0	1				34532	6294	17031	17107	40333	40333					0.20760417504698125
TLRLTKAHS	9	Unmodified	_TLRLTKAHS_					0	0	0		ENSG00000124659|ENST00000372876|TBCC	ENSG00000124659|ENST00000372876|TBCC	ENSG00000124659|ENST00000372876|TBCC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.2080566287041	3	342.873336	1025.59818	0.27437	9.4075E-05	2.1602	0.00074067	2.4346	0.00083475	343.20821092539586	36.844	0.30199	38.661	38.596	38.898	1.8176					38	17	3	0	0	0	0.79362	1	15495	15495		2.086	0	1	4015000			34533	2238	17032	17108	40334	40334					0.08640253945759468
TLRPLLNCL	9	Unmodified	_TLRPLLNCL_					0	0	0		ENST00000257860.8_1_12:49692132-49692414:+|nuORF	ENST00000257860.8_1_12:49692132-49692414:+|nuORF	ENST00000257860.8_1_12:49692132-49692414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2065002322197	3	348.207438	1041.60049	-1.6261	-0.00056623	-0.2141	-7.4551E-05	-1.8402	-0.00064078	348.20726117283294	32.311	1.1837	32.311	31.725	32.908	0					123	36	4	0	0	0	0.77876	1	13706	13706		4.1895	0	1	5645800			34534	5608	17033	17109	40335	40335					0.08134966359216378
TLRPLLNCL	9	Unmodified	_TLRPLLNCL_					0	0	0		ENST00000257860.8_1_12:49692132-49692414:+|nuORF	ENST00000257860.8_1_12:49692132-49692414:+|nuORF	ENST00000257860.8_1_12:49692132-49692414:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2069274783134	3	348.207438	1041.60049	0.8385	0.00029197	-2.4159	-0.00084125	-1.5774	-0.00054928	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.80056	1	13329	13329		3.3196	1.0369	1	7322900			34535	5608	17033	17109	40336	40336					0.08134966359216378
TLRPQEEK	8	Unmodified	_TLRPQEEK_					0	0	0		ENSG00000151778|ENST00000379179|SERP2	ENSG00000151778|ENST00000379179|SERP2	ENSG00000151778|ENST00000379179|SERP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1849548220634	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.771	1	16.597	16.097	17.097	0.82643								0	0	0	1.0178	1	6555	6555		3.5965	1.098	1				34536	3302	17034	17110	40337	40337					0.035122684378507074
TLRRCGSVTV	10	Unmodified	_TLRRCGSVTV_					0	0	0			REV__nc|ENSG00000183580|Q9UJT9-2|FBXL7	REV__nc|ENSG00000183580|Q9UJT9-2|FBXL7	MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3020507693291	2	546.303133	1090.59171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.88	1	33.705	33.205	34.205	1.8246								0	0	0	0.65894	1	13365	13365		6.2058	0	1		+		34537	11399	17035	17111	40338	40338					0.05003992722708972
TLRRQRHL	8	Unmodified	_TLRRQRHL_					0	0	0		ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	ENSG00000113555|ENST00000231484|PCDH12	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3318969607353	2	540.330873	1078.64719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.989	1	67.989	67.489	68.489	0								0	0	0	1.0178	1	28316	28316		2.8892	0.58649	1				34538	1826	17036	17112	40339	40339					0.1110158702535955
TLRTKKRRKYL	11	Unmodified	_TLRTKKRRKYL_					0	0	0		ENST00000280904.10_2_18:28671106-28672218:-|nuORF	ENST00000280904.10_2_18:28671106-28672218:-|nuORF	ENST00000280904.10_2_18:28671106-28672218:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	731.9688598513603	2	731.970077	1461.9256	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.61	1	102.78	102.28	103.28	0.16445								0	0	0	0.63775	1	43212	43212		1.3295	0	1				34539	5699	17037	17113	40340	40340					0.21311449487552636
TLRVRKLLL	9	Unmodified	_TLRVRKLLL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2623168826103	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.54	1	105.54	105.04	106.04	0								0	0	0	0.42693	1	44825	44825		0.26902	0	1				34540	3616	17038	17114	40341	40341					0.20914842698698521
TLRVRKLLL	9	Unmodified	_TLRVRKLLL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617980837822	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.74	1	105.74	105.24	106.24	0								0	0	0	0.42693	1	44953	44953		0.86438	0	1				34541	3616	17038	17114	40342	40342					0.20914842698698521
TLRVRKLLL	9	Unmodified	_TLRVRKLLL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2612792849541	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.83	1	105.83	105.33	106.33	0								0	0	0	0.42693	1	45018	45018		0.86438	0	1				34542	3616	17038	17114	40343	40343					0.20914842698698521
TLRVRKLLL	9	Unmodified	_TLRVRKLLL_					0	0	0		ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	ENSG00000162402|ENST00000294383|USP24	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2620727419853	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.74	1	105.79	105.29	106.29	0.05455								0	0	0	0.42693	1	44904	44904		0.86438	0	1				34543	3616	17038	17114	40344	40344					0.20914842698698521
TLRWRKRWRW	10	Unmodified	_TLRWRKRWRW_					0	0	0		ENST00000507209.5_1_4:187125362-187125452:+|nuORF	ENST00000507209.5_1_4:187125362-187125452:+|nuORF	ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	772.3939697146416	2	772.447103	1542.87965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.198	1	99.396	98.896	99.896	0.19767								0	0	0	0.6624	1	41760	41760		0.40072	0.093686	1				34544	7007	17039	17115	40345	40345					0.12992849095940073
TLRYYDKL	8	Unmodified	_TLRYYDKL_					0	0	0		tr|A0A7D7A1E5|A0A7D7A1E5_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12155PE=4SV=1	tr|A0A7D7A1E5|A0A7D7A1E5_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12155PE=4SV=1	tr|A0A7D7A1E5|A0A7D7A1E5_9CLOTMerRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_12155PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1635619997978	2	536.295299	1070.57605	1.6107	0.00086383	2.4933	0.0013372	4.1041	0.002201	536.2963714464361	45.66	0.35112	47.63	47.407	47.758	1.9703					22	10	3	0	0	0	2.3239	1	19050	19050		2.5775	0	1	1574400			34545	17237	17040	17116	40346	40346					0.043580294773164496
TLSDFLTEI	9	Unmodified	_TLSDFLTEI_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1038.537158191204	1	1038.53537	1037.52809	2.9349	0.003048	0.45224	0.00046967	3.3872	0.0035177	1038.5363811804364	84.192	0.18844	84.453	84.312	84.501	0.26083					6	5	2	0	0	0	0.1735	1	35211	35211		36.044	0	1	607160			34546	5320	17041	17117	40347	40347					0.010829107666040727
TLSDFLTEI	9	Unmodified	_TLSDFLTEI_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.7728759646416	2	519.771322	1037.52809	2.3444	0.0012185	1.3305	0.00069158	3.6749	0.0019101	519.7718630578592	83.279	0.31643	84.467	84.356	84.673	1.1879					14	9	2	0	0	0	0.22519	1	34961	34961		30.225	7.0764	1	1613200			34547	5320	17041	17117	40348	40348					0.010829107666040727
TLSDIKALI	9	Unmodified	_TLSDIKALI_					0	0	0		ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;ENSG00000130402|ENST00000252699|ACTN4	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	487.2472717165947	2	487.30005	972.585547	0.87088	0.00042438	-0.2588	-0.00012611	0.61207	0.00029826	487.3000224924331	55.707	0.21259	57.117	57.041	57.254	1.4099					15	12	2	0	0	0	0.11463	1	23318	23318		7.9102	3.5809	1	4492600			34548	2434	17042	17118	40349	40349					0.09815797762848888
TLSDIKALI	9	Unmodified	_TLSDIKALI_					0	0	0		ENST00000588618.5_1_19:39138385-39212431:+|nuORF;nc|ENSG00000130402|O43707-2|ACTN4;ENSG00000130402|ENST00000252699|ACTN4	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	ENST00000588618.5_1_19:39138385-39212431:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2988464236259	2	487.30005	972.585547	0.071398	3.4792E-05	-1.1847	-0.00057729	-1.1133	-0.0005425	487.2994077501449	55.218	0.26432	57.186	56.988	57.252	1.9684					15	12	2	0	0	0	0.075994	1	23149	23149		57.722	6.0922	1	6021100			34549	2434	17042	17118	40350	40350					0.09815797762848888
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.7642394900322	2	489.762443	977.510333	1.713	0.00083894	-0.010905	-5.3409E-06	1.7021	0.0008336	489.7624177778579	75.676	0.38232	75.676	75.502	75.884	0					20	11	2	0	0	0	0.46905	1	31515	31515		16.942	4.4107	1	1053400			34550	2747	17043	17119	40351	40351					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.7637206912041	2	489.762443	977.510333	3.1931	0.0015639	-1.0673	-0.00052275	2.1258	0.0010411	489.76186344301044	75.334	0.34946	75.658	75.458	75.807	0.32464					18	10	2	0	0	0	0.1735	2	31531	31468;31531		36.044	12.896	1	966120			34551	2747	17043	17119	40352;40353	40353					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	978.5214111208916	1	978.51761	977.510333	2.5464	0.0024917	-0.19797	-0.00019371	2.3485	0.002298	978.5177200916162	75.309	0.28603	75.633	75.49	75.776	0.32464					18	8	3	0	0	0	0.059546	1	31492	31492		64.236	3.8468	1	1343500			34552	2747	17043	17119	40354	40354					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7642394900322	2	489.762443	977.510333	3.4016	0.001666	0.39595	0.00019392	3.7975	0.0018599	489.7623981901886	74.368	0.38949	75.686	75.469	75.859	1.318					48	12	5	0	0	0	0.033794	2	31201	31156;31201		81.613	34.323	1	4832600			34553	2747	17043	17119	40355;40356	40356					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	978.5209228396416	1	978.51761	977.510333	3.6846	0.0036055	-0.98569	-0.00096452	2.6989	0.002641	978.5177066196973	74.326	0.35973	75.644	75.469	75.829	1.318					30	11	3	0	0	0	0.051699	2	31170	31170;31220		67.344	6.9543	1	4235600			34554	2747	17043	17119	40357;40358	40357					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	978.5193359255791	1	978.51761	977.510333	3.0049	0.0029404	-1.2498	-0.0012229	1.7552	0.0017175	978.5170198506273	73.906	0.36566	75.702	75.503	75.869	1.7962					26	11	3	0	0	0	0.042029	2	31006	30959;31006		74.423	7.0789	1	4029700			34555	2747	17043	17119	40359;40360	40360					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7638122439384	2	489.762443	977.510333	3.0871	0.001512	-0.81148	-0.00039743	2.2757	0.0011145	489.76225489796224	73.936	0.48586	75.733	75.471	75.957	1.7962					33	15	3	0	0	0	0.033794	3	31020	30975;31020;31069		81.613	30.758	1	4176600			34556	2747	17043	17119	40361;40362;40363	40362					0.020678722401157756
TLSDIMVSL	9	Unmodified	_TLSDIMVSL_					0	0	0		TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant;ENSG00000136891|ENST00000374902|TEX10;nc|ENSG00000136891|Q9NXF1-2|TEX10	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	978.51761	977.510333	1.8221	0.001783	0.15576	0.00015241	1.9779	0.0019354	978.5171511483196	75.739	0.28693	75.739	75.628	75.915	0	0.059555	0.0008727	NaN	74.423	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1185900			34557	2747	17043	17119							0.020678722401157756
TLSDIVVTL	9	Unmodified	_TLSDIVVTL_					0	0	0		ENST00000482926.1_1_6:42018279-42030992:+|nuORF;ENSG00000137413|ENST00000372977|TAF8;nc|ENSG00000137413|Q7Z7C8-2|TAF8;nc|ENSG00000137413|Q7Z7C8-4|TAF8	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.7846862673759	2	480.784233	959.553913	1.9879	0.00095576	-0.44592	-0.00021439	1.542	0.00074137	480.78377685989994	73.326	0.37038	73.326	73.121	73.491	0					22	11	3	0	0	0	0.059546	2	30498	30498;30544		64.236	0	1	2973600			34558	2767	17044	17120	40364;40365	40364					0.07251805008900192
TLSDIVVTL	9	Unmodified	_TLSDIVVTL_					0	0	0		ENST00000482926.1_1_6:42018279-42030992:+|nuORF;ENSG00000137413|ENST00000372977|TAF8;nc|ENSG00000137413|Q7Z7C8-2|TAF8;nc|ENSG00000137413|Q7Z7C8-4|TAF8	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.7848083376884	2	480.784233	959.553913	2.9044	0.0013964	-1.3826	-0.00066472	1.5218	0.00073168	480.78366827627224	72.875	0.38512	73.2	73.018	73.403	0.32494					28	11	3	0	0	0	0.033794	2	30502	30456;30502		81.613	10.479	1	2284900			34559	2767	17044	17120	40366;40367	40367					0.07251805008900192
TLSDIVVTL	9	Unmodified	_TLSDIVVTL_					0	0	0		ENST00000482926.1_1_6:42018279-42030992:+|nuORF;ENSG00000137413|ENST00000372977|TAF8;nc|ENSG00000137413|Q7Z7C8-2|TAF8;nc|ENSG00000137413|Q7Z7C8-4|TAF8	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.7850524783134	2	480.784233	959.553913	1.7781	0.00085487	-0.44242	-0.00021271	1.3356	0.00064216	480.7840489759702	71.709	0.59341	73.05	72.873	73.467	1.3415					50	18	4	0	0	0	0.10294	1	30191	30191		48.346	0	1	10659000			34560	2767	17044	17120	40368	40368					0.07251805008900192
TLSDIVVTL	9	Unmodified	_TLSDIVVTL_					0	0	0		ENST00000482926.1_1_6:42018279-42030992:+|nuORF;ENSG00000137413|ENST00000372977|TAF8;nc|ENSG00000137413|Q7Z7C8-2|TAF8;nc|ENSG00000137413|Q7Z7C8-4|TAF8	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	ENST00000482926.1_1_6:42018279-42030992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7844116091728	2	480.784233	959.553913	1.5341	0.00073758	-1.1082	-0.00053283	0.42587	0.00020475	480.78372246073513	71.32	0.72379	73.144	72.91	73.634	1.824					49	22	3	0	0	0	0.026628	2	29926	29926;29965		92.822	3.3953	1	16267000			34561	2767	17044	17120	40369;40370	40369					0.07251805008900192
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENST00000488788.2_1_20:629360-656142:-|nuORF;ENSG00000271303|ENST00000381962|SRXN1	ENST00000488788.2_1_20:629360-656142:-|nuORF	ENST00000488788.2_1_20:629360-656142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3096191287041	2	540.308406	1078.60226	2.0509	0.0011081	0.46796	0.00025284	2.5188	0.0013609	540.3085984245948	61.854	0.69184	61.854	61.582	62.274	0					57	21	4	0	0	0	0.0037498	4	25762	25717;25762;25801;25843		125.53	56.424	1	16915000			34562	5445	17045	17121	40371;40372;40373;40374	40372					0.06610298648797652
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENST00000488788.2_1_20:629360-656142:-|nuORF;ENSG00000271303|ENST00000381962|SRXN1	ENST00000488788.2_1_20:629360-656142:-|nuORF	ENST00000488788.2_1_20:629360-656142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3099853396416	2	540.308406	1078.60226	2.0933	0.0011311	0.61658	0.00033314	2.7099	0.0014642	540.3086808874408	61.262	0.71294	61.592	61.328	62.041	0.32974					63	22	5	0	0	0	0.032536	5	25631	25585;25631;25682;25724;25782		83.429	31.799	1	23262000			34563	5445	17045	17121	40375;40376;40377;40378;40379	40376					0.06610298648797652
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENST00000488788.2_1_20:629360-656142:-|nuORF;ENSG00000271303|ENST00000381962|SRXN1	ENST00000488788.2_1_20:629360-656142:-|nuORF	ENST00000488788.2_1_20:629360-656142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3091918826103	2	540.308406	1078.60226	2.6841	0.0014502	0.015388	8.3144E-06	2.6995	0.0014585	540.3083447236437	60.101	0.75829	61.521	61.236	61.995	1.4196					86	24	5	0	0	0	0.014947	4	25195	25147;25195;25247;25307		103.42	42.062	1	55138000			34564	5445	17045	17121	40380;40381;40382;40383	40381					0.06610298648797652
TLSDLRVYL	9	Unmodified	_TLSDLRVYL_					0	0	0		ENST00000488788.2_1_20:629360-656142:-|nuORF;ENSG00000271303|ENST00000381962|SRXN1	ENST00000488788.2_1_20:629360-656142:-|nuORF	ENST00000488788.2_1_20:629360-656142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3106567263603	2	540.308406	1078.60226	2.9202	0.0015778	-0.27861	-0.00015054	2.6416	0.0014273	540.3081758465564	59.601	0.63525	61.57	61.315	61.95	1.969					72	20	5	0	0	0	0.0070725	4	25038	24951;24997;25038;25079		114.2	54.128	1	41255000			34565	5445	17045	17121	40384;40385;40386;40387	40386					0.06610298648797652
TLSDVVVGL	9	Unmodified	_TLSDVVVGL_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7655822634697	2	451.7633	901.512048	3.1359	0.0014167	0.010052	4.5413E-06	3.146	0.0014212	451.76330686009385	62.826	0.56913	64.24	63.807	64.376	1.4134					34	18	2	0	0	0	0.069258	2	26232	26232;26281		60.39	15.983	1	2454300			34566	1684	17046	17122	40388;40389	40388					0.057352493203779886
TLSDVVVGL	9	Unmodified	_TLSDVVVGL_					0	0	0		ENSG00000109911|ENST00000640961|ELP4;nc|ENSG00000109911|Q96EB1-3|ELP4;nc|ENSG00000109911|Q96EB1-2|ELP4	ENSG00000109911|ENST00000640961|ELP4	ENSG00000109911|ENST00000640961|ELP4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5193359255791	1	902.519325	901.512048	2.9354	0.0026493	-0.22117	-0.00019961	2.7142	0.0024497	902.5191576294263	62.23	0.60378	64.187	63.815	64.419	1.9571					45	19	3	0	0	0	0.076627	1	26020	26020		57.471	0	1	4031800			34567	1684	17046	17122	40390	40390					0.057352493203779886
TLSELEENTVR	11	Unmodified	_TLSELEENTVR_					0	0	0			REV__tr|A0A553SKQ9|A0A553SKQ9_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_19210PE=3SV=1	REV__tr|A0A553SKQ9|A0A553SKQ9_NIACIserine-typeD-Ala-D-AlacarboxypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_19210PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885070681572	3	430.88938	1289.64631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.78	1	13.474	12.974	13.974	0.69396								0	0	0	0.63775	1	5307	5307		1.2148	0.4383	1		+		34568	14962	17047	17123	40391	40391					0.013072382844711683
TLSELGGK	8	Unmodified	_TLSELGGK_					0	0	0		ENST00000323460.9_1_3:196658967-196659150:+|nuORF	ENST00000323460.9_1_3:196658967-196659150:+|nuORF	ENST00000323460.9_1_3:196658967-196659150:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1799499392509	2	402.726718	803.438883	-0.55775	-0.00022462	0.40322	0.00016239	-0.15453	-6.2232E-05	402.72689034794314	12.739	0.18967	13.433	13.346	13.536	0.69396					9	5	2	0	0	0	2.3239	1	5303	5303		5.2307	0	1	925880			34569	5860	17048	17124	40392	40392					0.029301205977731115
TLSELKRLF	9	Unmodified	_TLSELKRLF_					0	0	0		nc|ENSG00000058600|Q9NVU0-3|POLR3E;nc|ENSG00000058600|Q9NVU0-2|POLR3E;nc|ENSG00000058600|Q9NVU0-5|POLR3E;ENST00000564061.5_1_16:22308800-22337695:+|nuORF;nc|ENSG00000058600|Q9NVU0-4|POLR3E;ENSG00000058600|ENST00000299853|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	nc|ENSG00000058600|Q9NVU0-3|POLR3E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8309203982353	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.75267	1	30073	30073		5.2307	0	1	5931400			34570	737	17049	17125	40393	40393					0.10094577919812764
TLSERLWGL	9	Unmodified	_TLSERLWGL_					0	0	0		ENST00000498134.1_1_13:33528197-33528527:-|nuORF;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.8022338747978	2	537.800749	1073.58694	1.8894	0.0010161	0.84586	0.0004549	2.7353	0.001471	537.8012046954457	58.864	0.50515	58.864	58.656	59.161	0					38	15	3	0	0	0	0.056421	3	24551	24503;24551;24594		65.474	32.688	1	5262500			34571	1253	17050	17126	40394;40395;40396	40395					0.0530943185160595
TLSERLWGL	9	Unmodified	_TLSERLWGL_					0	0	0		ENST00000498134.1_1_13:33528197-33528527:-|nuORF;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.8021118044853	2	537.800749	1073.58694	2.4974	0.0013431	0.37404	0.00020116	2.8714	0.0015442	537.8010594212055	58.343	0.4426	58.666	58.428	58.871	0.32298					36	13	4	0	0	0	0.032536	3	24456	24408;24456;24496		83.429	37.729	1	7822700			34572	1253	17050	17126	40397;40398;40399	40398					0.0530943185160595
TLSERLWGL	9	Unmodified	_TLSERLWGL_					0	0	0		ENST00000498134.1_1_13:33528197-33528527:-|nuORF;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.8011352419853	2	537.800749	1073.58694	1.5695	0.00084409	-0.36325	-0.00019536	1.2063	0.00064873	537.800518562777	57.123	0.43313	58.537	58.307	58.74	1.4145					41	14	4	0	0	0	0.032536	3	23945	23896;23945;23998		83.429	83.429	1	17629000			34573	1253	17050	17126	40400;40401;40402	40401					0.0530943185160595
TLSERLWGL	9	Unmodified	_TLSERLWGL_					0	0	0		ENST00000498134.1_1_13:33528197-33528527:-|nuORF;ENST00000416399.2_1_10:120403290-120403707:+|nuORF;ENSG00000100216|ENST00000216034|TOMM22;ENST00000492561.1_1_22:39078186-39079843:+|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	ENST00000498134.1_1_13:33528197-33528527:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.8010742068291	2	537.800749	1073.58694	1.0854	0.00058375	0.36339	0.00019543	1.4488	0.00077919	537.8009765620126	56.544	0.44868	58.512	58.273	58.721	1.9684					41	14	4	0	0	0	0.032536	3	23712	23664;23712;23767		83.429	33.496	1	16709000			34574	1253	17050	17126	40403;40404;40405	40404					0.0530943185160595
TLSGLLWEL	9	Unmodified	_TLSGLLWEL_					0	0	0		ENST00000487982.5_1_7:65541068-65551857:+|nuORF;ENST00000496336.1_1_7:65548063-65548162:+|nuORF;nc|ENSG00000126522|P04424-3|ASL;nc|ENSG00000126522|P04424-2|ASL;ENSG00000126522|ENST00000304874|ASL	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1031.587939441204	1	1031.57717	1030.5699	3.5238	0.0036351	-1.6392	-0.001691	1.8845	0.0019441	1031.5773526549003	93.425	0.41622	94.297	94.097	94.513	0.87176					18	12	2	0	0	0	0.013238	2	39305	39305;39355		104.8	40.563	1	2005300			34575	6884	17051	17127	40406;40407	40406					0.05583511245799855
TLSGLLWEL	9	Unmodified	_TLSGLLWEL_					0	0	0		ENST00000487982.5_1_7:65541068-65551857:+|nuORF;ENST00000496336.1_1_7:65548063-65548162:+|nuORF;nc|ENSG00000126522|P04424-3|ASL;nc|ENSG00000126522|P04424-2|ASL;ENSG00000126522|ENST00000304874|ASL	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	ENST00000487982.5_1_7:65541068-65551857:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1031.585742175579	1	1031.57717	1030.5699	3.8531	0.0039747	-0.090535	-9.3393E-05	3.7625	0.0038813	1031.574346002565	92.925	0.31637	94.202	94.038	94.355	1.277					14	9	2	0	0	0	0.042029	1	39093	39093		74.423	20.59	1	1874800			34576	6884	17051	17127	40408	40408					0.05583511245799855
TLSILSRKHV	10	Unmodified	_TLSILSRKHV_					0	0	0		nc|ENSG00000151914|Q03001|DST;ENSG00000151914|ENST00000680361|DST;DST|p.A2546Pfs*8|1|0.39|ENSG00000151914|chr6:56560327-56560327|C/-|frameshift_variant;DST|p.E3356Afs*12|1|0.31|ENSG00000151914|chr6:56535225-56535226|-/CCAG|frameshift_variant;nc|ENSG00000151914|Q03001-9|DST	nc|ENSG00000151914|Q03001|DST	nc|ENSG00000151914|Q03001|DST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1153.707934558392	1	1153.70517	1152.69789	2.9241	0.0033736	-0.9613	-0.0011091	1.9628	0.0022645	1153.7039552228152	107.43	0.15588	107.59	107.52	107.68	0.15795					23	7	4	0	0	0	0.89803	1	46156	46156		0.40072	0	1	66854000			34577	3306	17052	17128	40409	40409					0.12765071559692842
TLSKKIKERRE	11	Unmodified	_TLSKKIKERRE_					0	0	0			REV__ENSG00000168497|ENST00000304141|CAVIN2	REV__ENSG00000168497|ENST00000304141|CAVIN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4224731326103	2	694.422625	1386.8307	2.5051	0.0017396	-1.7323	-0.001203	0.77281	0.00053665	694.4215105236693	85.212	1.1922	85.464	84.814	86.006	0.25227					78	37	3	0	0	0	1.0249	1	35551	35551		2.2828	0.95324	1	3998800	+		34578	10913	17053	17129	40410	40410					0.1527547122566375
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9798461794853	4	337.981424	1347.89659	0.41537	0.00014039	-0.98481	-0.00033285	-0.56945	-0.00019246	337.98102562813136	26.38	0.26787	26.641	26.504	26.772	0.26173					13	8	2	0	0	0	1.0405	1	11062	11062		0	0	1	711820			34579	39	17054	17130	40411	40411					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.9821655154228	4	337.981424	1347.89659	0.45602	0.00015413	3.274	0.0011066	3.73	0.0012607	338.23351048472523	27.139	1.283	27.401	26.744	28.027	0.26173					108	41	4	0	0	0	1.0402	4	11149	11149;11201;11256;11301		0.094841	0.094841	1	2914800			34580	39	17054	17130	40412;40413;40414;40415	40412					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9826537966728	4	337.981424	1347.89659	0.14538	4.9135E-05	2.1044	0.00071126	2.2498	0.0007604	337.9821577808348	24.478	0.93239	25.719	25.455	26.387	1.241					57	30	3	0	0	0	1.0402	2	10180	10180;10277		0.073264	0.073264	1	2414100			34581	39	17054	17130	40416;40417	40416					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.9831725955009	4	337.981424	1347.89659	0.022361	7.5576E-06	2.4025	0.000812	2.4249	0.00081956	337.9821837545734	25.871	1.2357	27.13	26.405	27.641	1.2594					96	39	3	0	0	0	1.0402	2	10660	10660;10775		0.073264	0.073264	1	3806900			34582	39	17054	17130	40418;40419	40418					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9824096560478	4	337.981424	1347.89659	0.066085	2.2335E-05	1.9273	0.00065138	1.9934	0.00067372	337.9821271209151	24.04	0.64653	25.724	25.443	26.089	1.6845					63	20	4	0	0	0	1.0402	2	9999	9999;10052		0.073264	0.073264	1	1359000			34583	39	17054	17130	40420;40421	40420					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.9825317263603	4	337.981424	1347.89659	0.11537	3.8992E-05	2.518	0.00085103	2.6333	0.00089002	337.98209974058784	25.471	1.0381	27.188	26.514	27.552	1.7167					86	33	4	0	0	0	1.039	2	10545	10494;10545		0.45452	0.38125	1	4738500			34584	39	17054	17130	40422;40423	40423					0.23655912138519852
TLSLFKKKKKK	11	Unmodified	_TLSLFKKKKKK_					0	0	0		AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|7|2|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		4	337.981424	1347.89659	0.022361	7.5576E-06	2.4025	0.000812	2.4249	0.00081956	337.9821837545734	25.871	1.2357	27.13	26.405	27.641	1.2594	-0.10931	-0.00040038	NaN	0.45452	96	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3806900			34585	39	17054	17130							0.23655912138519852
TLSLKNPI	8	Unmodified	_TLSLKNPI_					0	0	0		ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	ENST00000504466.1_1_5:74645886-74647190:+|nuORF	ENST00000504466.1_1_5:74645886-74647190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.2734557986259	2	443.273835	884.533118	1.7872	0.00079222	-2.3195	-0.0010282	-0.53231	-0.00023596	443.2726917724099	67.542	0.46591	69.412	69.208	69.674	1.87					36	14	4	0	0	0	0.87431	1	28381	28381		12.532	1.7076	1	6946000			34586	1808	17055	17131	40424	40424					0.08623259419891838
TLSLKNPI	8	Unmodified	_TLSLKNPI_					0	0	0		ENST00000504466.1_1_5:74645886-74647190:+|nuORF;nc|ENSG00000113161|P04035-2|HMGCR;ENSG00000113161|ENST00000287936|HMGCR;nc|ENSG00000113161|P04035-3|HMGCR	ENST00000504466.1_1_5:74645886-74647190:+|nuORF	ENST00000504466.1_1_5:74645886-74647190:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	443.273835	884.533118	2.2639	0.0010035	-1.5361	-0.00068093	0.72772	0.00032258	443.2730890217974	67.972	0.4878	69.35	69.035	69.523	1.3778	0.082503	0.0006749	NaN	12.532	42	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7548800			34587	1808	17055	17131							0.08623259419891838
TLSLNTLIL	9	Unmodified	_TLSLNTLIL_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3088867068291	2	494.307875	986.601197	2.0903	0.0010333	-0.13404	-6.6257E-05	1.9563	0.00096701	494.30763939557636	84.509	0.28381	84.509	84.399	84.683	0					16	8	2	0	0	0	0.10993	1	35225	35225		46.021	6.0636	1	971450	+		34588	8551	17056	17132	40425	40425					0.10736084279915303
TLSLNTLIL	9	Unmodified	_TLSLNTLIL_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3074828982353	2	494.307875	986.601197	3.0973	0.001531	-1.9222	-0.00095015	1.1751	0.00058087	494.30662610167695	84.027	0.34106	84.288	84.096	84.437	0.26083					17	10	2	0	0	0	0.39927	1	35122	35122		20.454	3.5113	1	540870	+		34589	8551	17056	17132	40426	40426					0.10736084279915303
TLSLNTLIL	9	Unmodified	_TLSLNTLIL_					0	0	0			REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	REV__nc|ENSG00000019102|Q96IQ7-2|VSIG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3087341189384	2	494.307875	986.601197	2.9638	0.001465	0.52559	0.0002598	3.4894	0.0017248	494.3078475430141	82.488	0.39793	84.158	84.049	84.447	1.67					26	12	3	0	0	0	0.15635	1	34599	34599		37.974	0	1	4384100	+		34590	8551	17056	17132	40427	40427					0.10736084279915303
TLSLRRKGRK	10	Unmodified	_TLSLRRKGRK_					0	0	0			REV__ENST00000325203.9_1_8:6420550-6420658:-|nuORF	REV__ENST00000325203.9_1_8:6420550-6420658:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	406.2098266482353	3	405.598317	1213.77312	4.5311	0.0018378	-1.4138	-0.00057344	3.1173	0.0012644	405.5978335137484	89.358	0.4676	90.763	90.488	90.955	1.4044					28	14	3	0	0	0	0.1256	1	37654	37654		0.69767	0	1	2213800	+		34591	12425	17057	17133	40428	40428					0.17478673810774126
TLSQVIPMV	9	Unmodified	_TLSQVIPMV_					0	0	0		ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	ENSG00000100426|ENST00000216268|ZBED4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7869140505791	2	494.280803	986.547053	1.8175	0.00089837	0.78	0.00038554	2.5975	0.0012839	494.27904515576404	46.575	0.37189	47.95	47.743	48.115	1.3751					19	11	2	0	0	0	0.27148	1	19539	19539		26.884	0	1	1475100			34592	1278	17058	17134	40429	40429					0.05324168856691358
TLSRIYVEN	9	Unmodified	_TLSRIYVEN_					0	0	0		nc|ENSG00000005961|P08514-3|ITGA2B;nc|ENSG00000005961|P08514-2|ITGA2B;ENSG00000005961|ENST00000262407|ITGA2B	nc|ENSG00000005961|P08514-3|ITGA2B	nc|ENSG00000005961|P08514-3|ITGA2B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	547.2615234255791	2	547.795663	1093.57677	1.815	0.00099424	2.9706	0.0016273	4.7855	0.0026215	547.7969102276804	45.596	0.2524	46.971	46.832	47.085	1.3751					17	7	3	0	0	0	0.1082	1	19091	19091		18.146	3.3081	1	1191500			34593	498	17059	17135	40430	40430					0.03372824126381602
TLTDRIAAAQ	10	Unmodified	_TLTDRIAAAQ_					0	0	0		nc|ENSG00000065609|O60641-2|SNAP91;nc|ENSG00000065609|O60641-3|SNAP91;nc|ENSG00000065609|O60641-4|SNAP91;ENSG00000065609|ENST00000369694|SNAP91	nc|ENSG00000065609|O60641-2|SNAP91	nc|ENSG00000065609|O60641-2|SNAP91	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2942993044853	2	530.293288	1058.57202	2.1931	0.001163	0.094922	5.0336E-05	2.288	0.0012133	530.2934102570454	63.823	0.59647	65.23	64.869	65.466	1.4071					45	18	3	0	0	0	0.38174	1	26745	26745		34.402	1.616	1	4591500			34594	791	17060	17136	40431	40431					0.045079399835913136
TLTEEGVIKV	10	Unmodified	_TLTEEGVIKV_					0	0	0		nc|ENSG00000107937|Q9BZE4-3|GTPBP4;nc|ENSG00000107937|Q9BZE4-2|GTPBP4;ENSG00000107937|ENST00000360803|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	nc|ENSG00000107937|Q9BZE4-3|GTPBP4	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8132812380791	2	544.813522	1087.61249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.23	1	38.514	38.014	39.014	1.284								0	0	0	0.18994	1	15630	15630		38.615	13.624	1				34595	1614	17061	17137	40432	40432					0.07218861583396574
TLTKDRKI	8	Unmodified	_TLTKDRKI_					0	0	0			REV__ENSG00000161551|ENST00000638348|ZNF577	REV__ENSG00000161551|ENST00000638348|ZNF577	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	487.2477599978447	2	487.803291	973.59203	2.9858	0.0014565	-2.3462	-0.0011445	0.6396	0.000312	487.80185431723197	56.853	0.21116	57.174	57.05	57.261	0.32103					9	6	2	0	0	0	2.3239	1	23861	23861		2.5775	0	1	752720	+		34596	10620	17062	17138	40433	40433					0.10417735714224818
TLTNIIHNL	9	Unmodified	_TLTNIIHNL_					0	0	0		ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	ENSG00000128699|ENST00000392349|ORMDL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1408569216728	2	519.800749	1037.58694	2.1539	0.0011196	0.19094	9.9249E-05	2.3449	0.0012189	519.8008403724363	54.254	0.30372	54.254	54.12	54.424	0					13	9	2	0	0	0	0.11833	1	22675	22675		4.3292	0	1	656000			34597	2380	17063	17139	40434	40434					0.06965431851608628
TLTNVIHNL	9	Unmodified	_TLTNVIHNL_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.7948486208916	2	512.792924	1023.57129	2.1417	0.0010983	0.42112	0.00021595	2.5629	0.0013142	512.793054780687	45.778	0.38487	45.778	45.593	45.978	0					22	11	3	0	0	0	0.073578	2	19141	19141;19194		58.679	18.721	1	1714900			34598	2187	17064	17140	40435;40436	40435					0.0604514533456495
TLTNVIHNL	9	Unmodified	_TLTNVIHNL_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.7942993044853	2	512.792924	1023.57129	1.917	0.00098301	1.0483	0.00053757	2.9653	0.0015206	512.7933277638546	45.207	0.37865	45.534	45.343	45.722	0.32674					27	12	3	0	0	0	0.1109	2	19003	18952;19003		45.7	10.728	1	1654900			34599	2187	17064	17140	40437;40438	40438					0.0604514533456495
TLTNVIHNL	9	Unmodified	_TLTNVIHNL_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.7942993044853	2	512.792924	1023.57129	2.29	0.0011743	0.37197	0.00019075	2.662	0.0013651	512.7930645815459	43.721	0.39638	45.075	44.825	45.222	1.3536					32	12	4	0	0	0	0.0080158	2	18341	18295;18341		110.67	55.901	1	7151500			34600	2187	17064	17140	40439;40440	40440					0.0604514533456495
TLTNVIHNL	9	Unmodified	_TLTNVIHNL_					0	0	0		ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	ENSG00000123353|ENST00000243045|ORMDL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7939330935478	2	512.792924	1023.57129	2.3201	0.0011898	0.03513	1.8015E-05	2.3553	0.0012078	512.7926528762272	43.053	0.36246	44.974	44.811	45.173	1.9211					29	11	3	0	0	0	0.01454	2	18076	18028;18076		103.75	46.277	1	6020900			34601	2187	17064	17140	40441;40442	40442					0.0604514533456495
TLTRLLLLL	9	Unmodified	_TLTRLLLLL_					0	0	0			REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3645507693291	2	528.362985	1054.71142	2.8223	0.0014912	0.72468	0.00038289	3.5469	0.0018741	528.3632887929728	93.428	0.41949	93.596	93.419	93.839	0.16835					31	12	3	0	0	0	0.32838	1	39092	39092		24.021	0	1	1967600	+		34602	12453	17065	17141	40443	40443					0.18624929338966467
TLTRLLLLL	9	Unmodified	_TLTRLLLLL_					0	0	0			REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3647949099541	2	528.362985	1054.71142	3.402	0.0017975	0.40554	0.00021427	3.8076	0.0020118	528.3632069648436	91.934	0.64505	93.261	93.021	93.666	1.3269					51	19	4	0	0	0	0.11643	1	38725	38725		43.858	5.8843	1	5541100	+		34603	12453	17065	17141	40444	40444					0.18624929338966467
TLTRPSVH	8	Unmodified	_TLTRPSVH_					0	0	0			REV__ENSG00000112118|ENST00000596288|MCM3	REV__ENSG00000112118|ENST00000596288|MCM3	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1759216189384	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.289	1	81.289	80.789	81.789	0								0	0	0	1.0178	1	33850	33850		0.45834	0	1		+		34604	9353	17066	17142	40445	40445					0.044843204745689036
TLTRRRTRMRR	11	Unmodified	_TLTRRRTRMRR_					0	0	0		ENST00000282570.3_1_2:70057088-70064689:+|nuORF	ENST00000282570.3_1_2:70057088-70064689:+|nuORF	ENST00000282570.3_1_2:70057088-70064689:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	502.3384277224541	3	501.635548	1501.88481	2.0259	0.0010163	-3.0183	-0.0015141	-0.99235	-0.0004978	501.9693374586683	91.981	0.15662	91.981	91.915	92.071	0					5	4	2	0	0	0	0.14606	1	38458	38458		0	0	1	276920			34605	5705	17067	17143	40446	40446					0.15394784896261626
TLTSKLYSL	9	Unmodified	_TLTSKLYSL_					0	0	0		nc|ENSG00000184076|Q9UDW1-2|UQCR10;ENSG00000184076|ENST00000330029|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	513.9564086794853	2	513.297507	1024.58046	2.0744	0.0010648	0.072322	3.7123E-05	2.1467	0.0011019	513.2978971167304	44.088	0.35115	44.088	43.873	44.225	0					23	10	3	0	0	0	0.10591	1	18401	18401		19.257	4.4187	1	1605700			34606	4680	17068	17144	40447	40447					0.0691549390023738
TLTSKLYSL	9	Unmodified	_TLTSKLYSL_					0	0	0		nc|ENSG00000184076|Q9UDW1-2|UQCR10;ENSG00000184076|ENST00000330029|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	513.6221191287041	2	513.297507	1024.58046	1.9307	0.00099101	1.015	0.00052098	2.9456	0.001512	513.2977845029375	43.494	0.34941	43.818	43.611	43.96	0.32389					17	10	2	0	0	0	0.11539	1	18291	18291		12.241	2.1667	1	2557600			34607	4680	17068	17144	40448	40448					0.0691549390023738
TLTSKLYSL	9	Unmodified	_TLTSKLYSL_					0	0	0		nc|ENSG00000184076|Q9UDW1-2|UQCR10;ENSG00000184076|ENST00000330029|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2966186404228	2	513.297507	1024.58046	2.2302	0.0011448	-1.1511	-0.00059083	1.0792	0.00055393	513.2966844310502	41.478	0.3634	43.371	43.209	43.573	1.8927					21	11	2	0	0	0	0.093059	1	17359	17359		51.63	7.7715	1	8479400			34608	4680	17068	17144	40449	40449					0.0691549390023738
TLTSKLYSL	9	Unmodified	_TLTSKLYSL_					0	0	0		nc|ENSG00000184076|Q9UDW1-2|UQCR10;ENSG00000184076|ENST00000330029|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	nc|ENSG00000184076|Q9UDW1-2|UQCR10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	513.297507	1024.58046	2.2888	0.0011748	-0.035231	-1.8084E-05	2.2536	0.0011568	513.2971259848024	41.965	0.43008	43.305	43.141	43.571	1.3399	-0.032753	0.00048939	NaN	51.63	26	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6005100			34609	4680	17068	17144							0.0691549390023738
TLTSLNILL	9	Unmodified	_TLTSLNILL_					0	0	0		ENST00000373840.8_1_9:123954490-123964046:-|nuORF	ENST00000373840.8_1_9:123954490-123964046:-|nuORF	ENST00000373840.8_1_9:123954490-123964046:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	987.6078979372978	1	987.608474	986.601197	3.3063	0.0032653	0.063069	6.2288E-05	3.3693	0.0033276	987.6068356597328	82.575	0.18094	84.245	84.113	84.294	1.67					9	5	2	0	0	0	0.023786	1	34620	34620		96.285	7.3309	1	2239100			34610	6164	17069	17145	40450	40450					0.10736084279915303
TLTSNIPEI	9	Unmodified	_TLTSNIPEI_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENST00000418334.5_1_1:160144048-160152563:+|nuORF	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.2732116580009	2	494.27149	986.528426	1.7487	0.00086432	-0.87896	-0.00043445	0.86971	0.00042987	494.27082741881605	54.414	0.38046	55.819	55.551	55.931	1.4048					15	11	2	0	0	0	0.1735	1	22785	22785		36.044	0	1	1205400			34611	3677	17070	17146	40451	40451					0.034623304864680904
TLTSNIPEI	9	Unmodified	_TLTSNIPEI_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENST00000418334.5_1_1:160144048-160152563:+|nuORF	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.2691833376884	2	494.27149	986.528426	1.4397	0.00071159	-1.617	-0.00079922	-0.17728	-8.7626E-05	494.27044101646214	53.893	0.28162	55.862	55.752	56.034	1.9697					12	8	2	0	0	0	0.10993	1	22588	22588		46.021	11.919	1	1263300			34612	3677	17070	17146	40452	40452					0.034623304864680904
TLVAADSK	8	Unmodified	_TLVAADSK_					0	0	0			REV__ENST00000506241.1_1_5:55251841-55256299:-|nuORF	REV__ENST00000506241.1_1_5:55251841-55256299:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1801025271416	2	402.726718	803.438883	-0.013616	-5.4835E-06	-0.73349	-0.0002954	-0.7471	-0.00030088	402.72686483890317	12.529	0.18265	13.316	13.212	13.395	0.78751					11	5	3	0	0	0	2.3239	1	5177	5177		0.6015	0	1	898470	+		34613	9903	17071	17147	40453	40453					0.02930120597750374
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	858.5307494997978	1	858.529495	857.522219	1.5924	0.0013671	-1.5371	-0.0013196	0.055293	4.747E-05	858.5281118444468	70.909	0.25595	70.909	70.811	71.067	0					13	7	2	0	0	0	0.051699	1	29522	29522		67.344	0	1	550860	+		34614	8272	17072	17148	40454	40454					0.08775857045611701
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	858.5291015505791	1	858.529495	857.522219	1.8739	0.0016088	-3.0986	-0.0026602	-1.2247	-0.0010514	858.5272430995778	69.295	0.28609	70.66	70.501	70.787	1.3657					13	9	2	0	0	0	0.03795	1	29065	29065		77.984	0	1	2001800	+		34615	8272	17072	17148	40455	40455					0.08775857045611701
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	858.5268432497978	1	858.529495	857.522219	1.3694	0.0011757	-1.5245	-0.0013088	-0.15508	-0.00013314	858.5279994971719	68.75	0.27003	70.602	70.439	70.709	1.853					14	8	2	0	0	0	0.03795	2	28816	28816;28866		77.984	0	1	2068500	+		34616	8272	17072	17148	40456;40457	40456					0.08775857045611701
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	858.529495	857.522219	1.3351	0.0011462	-1.7476	-0.0015003	-0.41245	-0.0003541	858.5282420911125	70.4	0.27018	70.723	70.591	70.861	0.32224	-0.00087984	0.00011788	NaN	77.984	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	887030	+		34617	8272	17072	17148							0.08775857045611701
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	858.529495	857.522219	1.8739	0.0016088	-3.0986	-0.0026602	-1.2247	-0.0010514	858.5272430995778	69.295	0.28609	70.66	70.501	70.787	1.3657	-0.063191	-0.001042	NaN	77.984	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2001800	+		34618	8272	17072	17148							0.08775857045611701
TLVAAVTLA	9	Unmodified	_TLVAAVTLA_					0	0	0			REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	REV__chr17:44320436-44321105|104|56.12|0.03|11.06|-|0|SLC25A39,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	858.529495	857.522219	1.3694	0.0011757	-1.5245	-0.0013088	-0.15508	-0.00013314	858.5279994971719	68.75	0.27003	70.602	70.439	70.709	1.853	-0.12107	0.00030939	NaN	77.984	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2068500	+		34619	8272	17072	17148							0.08775857045611701
TLVADLIMTL	10	Unmodified	_TLVADLIMTL_					0	0	0		nc|ENSG00000181631|Q9BPV8-2|P2RY13;ENSG00000181631|ENST00000325602|P2RY13	nc|ENSG00000181631|Q9BPV8-2|P2RY13	nc|ENSG00000181631|Q9BPV8-2|P2RY13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8184081912041	2	545.314843	1088.61513	1.3153	0.00071727	3.1087	0.0016952	4.4241	0.0024125	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.85604	1	29109	29109		6.2058	1.4498	1	2013200			34620	4584	17073	17149	40458	40458					0.07436993716692086
TLVCHEVDLD	10	Unmodified	_TLVCHEVDLD_					0	0	0		nc|ENSG00000032219|P29374-3|ARID4A;nc|ENSG00000032219|P29374-2|ARID4A;ENSG00000032219|ENST00000355431|ARID4A	nc|ENSG00000032219|P29374-3|ARID4A	nc|ENSG00000032219|P29374-3|ARID4A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	572.2721435427666	2	572.271164	1142.52777	1.5309	0.00087608	0.91457	0.00052338	2.4455	0.0013995	572.2716039257141	72.892	1.2224	72.892	72.269	73.491	0					74	38	3	0	0	0	0.6819	1	30316	30316		19.257	0	1	5305000			34621	636	17074	17150	40459	40459					-0.03778832224884354
TLVCHEVDLD	10	Unmodified	_TLVCHEVDLD_					0	0	0		nc|ENSG00000032219|P29374-3|ARID4A;nc|ENSG00000032219|P29374-2|ARID4A;ENSG00000032219|ENST00000355431|ARID4A	nc|ENSG00000032219|P29374-3|ARID4A	nc|ENSG00000032219|P29374-3|ARID4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2721435427666	2	572.271164	1142.52777	0.99283	0.00056817	0.13502	7.7266E-05	1.1279	0.00064544	572.2709610090108	70.857	0.95221	72.695	72.411	73.363	1.8378					79	30	4	0	0	0	0.35292	1	29719	29719		36.127	7.0454	1	20682000			34622	636	17074	17150	40460	40460					-0.03778832224884354
TLVDEVFRI	9	Unmodified	_TLVDEVFRI_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3109008669853	2	546.308406	1090.60226	1.8454	0.0010082	2.0866	0.0011399	3.932	0.0021481	546.3096266192535	72.142	0.25616	72.467	72.291	72.547	0.32494					25	7	4	0	0	0	0.099302	1	30164	30164		49.554	17.249	1	5653000			34623	2022	17075	17151	40461	40461					0.06058298648804339
TLVDEVFRI	9	Unmodified	_TLVDEVFRI_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3098632693291	2	546.308406	1090.60226	2.6422	0.0014435	-1.3322	-0.00072779	1.31	0.00071566	546.3077107861993	70.976	0.40656	72.317	71.957	72.364	1.3415					26	12	3	0	0	0	0.060242	1	29759	29759		63.961	25.785	1	17395000			34624	2022	17075	17151	40462	40462					0.06058298648804339
TLVDEVFRI	9	Unmodified	_TLVDEVFRI_					0	0	0		ENSG00000117748|ENST00000373912|RPA2;nc|ENSG00000117748|P15927-2|RPA2;nc|ENSG00000117748|P15927-3|RPA2	ENSG00000117748|ENST00000373912|RPA2	ENSG00000117748|ENST00000373912|RPA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3063842654228	2	546.308406	1090.60226	1.604	0.00087629	-2.6393	-0.0014419	-1.0352	-0.00056556	546.3069647600928	70.492	0.33868	72.33	72.01	72.349	1.8378					26	10	3	0	0	0	0.070055	1	29563	29563		60.074	25.672	1	18714000			34625	2022	17075	17151	40463	40463					0.06058298648804339
TLVDFPLHL	9	Unmodified	_TLVDFPLHL_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.8015624880791	2	527.800217	1053.58588	1.9125	0.0010094	0.22598	0.00011927	2.1385	0.0011287	527.8001679523712	77.424	0.34338	77.424	77.252	77.596	0					28	10	3	0	0	0	0.076627	3	32235	32189;32235;32293		57.471	25.166	1	3661600			34626	1707	17076	17152	40464;40465;40466	40465					0.06123217482695509
TLVDFPLHL	9	Unmodified	_TLVDFPLHL_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.8019286990166	2	527.800217	1053.58588	2.2698	0.001198	0.30481	0.00016088	2.5746	0.0013589	527.8002769226651	76.867	0.3796	77.183	77.008	77.387	0.31653					29	11	3	0	0	0	0.069258	2	32166	32117;32166		60.39	22.66	1	3574000			34627	1707	17076	17152	40467;40468	40468					0.06123217482695509
TLVDFPLHL	9	Unmodified	_TLVDFPLHL_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.8023559451103	2	527.800217	1053.58588	2.4638	0.0013004	1.8755	0.00098989	4.3393	0.0022903	527.8013755846722	75.846	0.33755	77.14	76.912	77.25	1.2938					34	10	4	0	0	0	0.046276	2	31838	31794;31838		70.716	27.387	1	8691100			34628	1707	17076	17152	40469;40470	40470					0.06123217482695509
TLVDFPLHL	9	Unmodified	_TLVDFPLHL_					0	0	0		MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant;nc|ENSG00000110514|Q8WXG6-6|MADD;nc|ENSG00000110514|Q8WXG6-8|MADD;nc|ENSG00000110514|Q8WXG6-5|MADD;nc|ENSG00000110514|Q8WXG6-4|MADD;nc|ENSG00000110514|Q8WXG6-7|MADD;nc|ENSG00000110514|Q8WXG6-3|MADD;nc|ENSG00000110514|Q8WXG6-2|MADD;nc|ENSG00000110514|Q8WXG6|MADD;ENSG00000110514|ENST00000706887|MADD	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MADD|p.F796Lfs*31|1|0.11|ENSG00000110514|chr11:47285167-47285168|-/TCTGTCGCCCAGGCTAGAGCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.8029052615166	2	527.800217	1053.58588	2.842	0.0015	0.96074	0.00050708	3.8028	0.0020071	527.8006715285412	75.306	0.31354	77.088	76.913	77.227	1.7817					32	9	4	0	0	0	0.051699	2	31617	31565;31617		67.344	19.156	1	6771100			34629	1707	17076	17152	40471;40472	40472					0.06123217482695509
TLVDPTRHL	9	Unmodified	_TLVDPTRHL_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12	nc|ENSG00000184634|Q93074-3|MED12	nc|ENSG00000184634|Q93074-3|MED12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8056518435478	2	526.298373	1050.58219	4.7527	0.0025013	1.6515	0.00086919	6.4042	0.0033705	526.8014357927836	88.203	0.28551	89.65	89.509	89.794	1.4467					18	8	3	0	0	0	0.61249	1	37162	37162		10.824	1.4765	1	731220			34630	4700	17077	17153	40473	40473					0.05892547708845086
TLVEAIKQV	9	Unmodified	_TLVEAIKQV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant;nc|ENSG00000155363|Q9HCE1-2|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8074828982353	2	500.8055	999.596446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.205	1	39.514	39.014	40.014	0.30857								0	0	0	0.30476	1	16490	16490		18.146	4.2403	1				34631	3416	17078	17154	40474	40474					0.09663200137140393
TLVEAIKQV	9	Unmodified	_TLVEAIKQV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant;nc|ENSG00000155363|Q9HCE1-2|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8054077029228	2	500.8055	999.596446	1.1471	0.00057448	0.9538	0.00047767	2.1009	0.0010521	500.80577341052793	37.869	0.25377	39.153	39.019	39.272	1.284					15	9	2	0	0	0	0.044893	1	15901	15901		71.922	19.654	1	1016100			34632	3416	17078	17154	40475	40475					0.09663200137140393
TLVEAIKQV	9	Unmodified	_TLVEAIKQV_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant;nc|ENSG00000155363|Q9HCE1-2|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	500.8055	999.596446	0.51782	0.00025933	1.006	0.0005038	1.5238	0.00076312	500.8060025613643	37.25	0.24908	39.07	38.948	39.197	1.8202	-0.041461	2.7606E-05	NaN	71.922	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	791630			34633	3416	17078	17154							0.09663200137140393
TLVGNFTIII	10	Unmodified	_TLVGNFTIII_					0	0	0		ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8303100466728	2	545.828975	1089.6434	1.3731	0.00074948	0.70203	0.00038319	2.0751	0.0011327	545.8292523276521	68.095	0.41151	68.095	67.915	68.327	0					36	12	4	0	0	0	0.064034	1	28337	28337		72.968	5.1298	1	3505700			34634	4448	17079	17155	40476	40476					0.10216059688286805
TLVGNFTIII	10	Unmodified	_TLVGNFTIII_					0	0	0		ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.8308593630791	2	545.828975	1089.6434	1.7252	0.00094168	0.66206	0.00036137	2.3873	0.0013031	545.8291682662417	67.497	0.40701	67.82	67.619	68.026	0.32269					35	12	4	0	0	0	0.25725	1	28218	28218		41.956	0	1	4161000			34635	4448	17079	17155	40477	40477					0.10216059688286805
TLVGNFTIII	10	Unmodified	_TLVGNFTIII_					0	0	0		ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8302490115166	2	545.828975	1089.6434	1.8685	0.0010199	0.055015	3.0029E-05	1.9235	0.0010499	545.8288293706106	66.192	0.51363	67.581	67.36	67.874	1.3888					40	16	3	0	0	0	0.06208	2	27808	27808;27855		118.07	3.4193	1	19446000			34636	4448	17079	17155	40478;40479	40478					0.10216059688286805
TLVGNFTIII	10	Unmodified	_TLVGNFTIII_					0	0	0		ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	ENSG00000177476|ENST00000320002|OR2G3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	545.828975	1089.6434	1.7541	0.00095743	-0.99145	-0.00054116	0.76264	0.00041627	545.828438784151	65.687	0.54359	67.596	67.407	67.951	1.9085	-0.17698	-0.0010597	NaN	118.07	42	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16207000			34637	4448	17079	17155							0.10216059688286805
TLVHCPLSL	9	Unmodified	_TLVHCPLSL_					0	0	0			REV__ENST00000206423.7_2_3:112317930-112318098:-|nuORF	REV__ENST00000206423.7_2_3:112317930-112318098:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7755615115166	2	491.773145	981.531738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.896	1	73.221	72.721	73.721	0.32494								0	0	0	0.26021	1	30494	30494		21.747	0	1		+		34638	12057	17080	17156	40480	40480					0.04023302059488287
TLVIPLLN	8	Unmodified	_TLVIPLLN_					0	0	0		ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.7879821658134	2	441.786579	881.558604	1.4167	0.00062586	2.2262	0.00098351	3.6429	0.0016094	441.7875899299477	26.739	0.4009	27.001	26.802	27.203	0.26173					35	12	4	0	0	0	0.89051	1	11170	11170		2.3027	0	1	16176000			34639	5199	17081	17157	40481	40481					0.11308733942337312
TLVIPLLN	8	Unmodified	_TLVIPLLN_					0	0	0		ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.7877685427666	2	441.786579	881.558604	1.5303	0.00067606	2.1817	0.00096384	3.712	0.0016399	441.7874449671007	25.558	0.36936	26.817	26.617	26.987	1.2594					30	11	4	0	0	0	0.89051	1	10733	10733		2.3027	0	1	12495000			34640	5199	17081	17157	40482	40482					0.11308733942337312
TLVIPLLN	8	Unmodified	_TLVIPLLN_					0	0	0		ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	ENSG00000206536|ENST00000383695|OR5K3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7876769900322	2	441.786579	881.558604	0.75971	0.00033563	1.9986	0.00088296	2.7583	0.0012186	441.7874244420148	25.602	0.45965	27.319	27.152	27.612	1.7167					48	14	4	0	0	0	0.89051	1	10683	10683		2.3027	0	1	37311000			34641	5199	17081	17157	40483	40483					0.11308733942337312
TLVKNLINV	9	Unmodified	_TLVKNLINV_					0	0	0		ENST00000399070.3_2_18:32886088-32886400:+|nuORF	ENST00000399070.3_2_18:32886088-32886400:+|nuORF	ENST00000399070.3_2_18:32886088-32886400:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3224365115166	2	507.321317	1012.62808	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.694	1	48.694	48.194	49.194	0								0	0	0	0.32813	1	20335	20335		15.847	1.9411	1				34642	6332	17082	17158	40484	40484					0.12227192891100458
TLVLAIPLLL	10	Unmodified	_TLVLAIPLLL_					0	0	0		ENSG00000180708|ENST00000641042|OR10K2	ENSG00000180708|ENST00000641042|OR10K2	ENSG00000180708|ENST00000641042|OR10K2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	355.9145690798759	3	355.914249	1064.72092	-1.8385	-0.00065436	2.7205	0.00096827	0.88198	0.00031391	355.91513654324865	22.794	0.2349	22.794	22.722	22.957	0					21	7	3	0	0	0	0.89803	1	9496	9496		0.77653	0	1	3714000			34643	4553	17083	17159	40485	40485					0.19114697624468135
TLVLVLQP	8	Unmodified	_TLVLVLQP_					0	0	0		ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.7881957888603	2	441.786579	881.558604	0.83434	0.0003686	2.8628	0.0012647	3.6971	0.0016333	441.78773654378494	27.846	0.50831	27.846	27.591	28.1	0					51	16	4	0	0	0	0.89008	1	11642	11642		2.5775	0	1	25154000			34644	1562	17084	17160	40486	40486					0.11308733942325944
TLVLVLQP	8	Unmodified	_TLVLVLQP_					0	0	0		ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7883483767509	2	441.786579	881.558604	0.75971	0.00033563	1.9986	0.00088296	2.7583	0.0012186	441.7874244420148	25.602	0.45965	27.319	27.152	27.612	1.7167					48	14	4	0	0	0	0.89008	1	10790	10790		2.5775	0	1	37311000			34645	1562	17084	17160	40487	40487					0.11308733942325944
TLVLVLQP	8	Unmodified	_TLVLVLQP_					0	0	0		ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	441.786579	881.558604	1.4433	0.00063763	3.6881	0.0016294	5.1314	0.002267	441.78808816512424	27.178	0.5266	27.44	27.235	27.762	0.26173	0.082612	0.00050138	NaN	2.5775	57	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25316000			34646	1562	17084	17160							0.11308733942325944
TLVLVLQP	8	Unmodified	_TLVLVLQP_					0	0	0		ENSG00000106268|ENST00000356714|NUDT1;nc|ENSG00000106268|P36639-3|NUDT1;nc|ENSG00000106268|P36639-2|NUDT1;nc|ENSG00000106268|P36639-1|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	ENSG00000106268|ENST00000356714|NUDT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	441.786579	881.558604	1.4761	0.00065214	2.9582	0.0013069	4.4344	0.001959	441.78781838041436	26.054	0.56371	27.313	27.109	27.673	1.2594	-0.044155	-0.00014355	NaN	2.5775	51	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17521000			34647	1562	17084	17160							0.11308733942325944
TLVLYGSEE	9	Unmodified	_TLVLYGSEE_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.7586547732353	2	505.755672	1009.49679	3.0174	0.001526	2.6663	0.0013485	5.6837	0.0028746	505.7569993428622	92.466	0.55571	92.635	92.377	92.933	0.16835					45	17	4	0	0	0	0.3091	2	38713	38713;38770		26.884	0	1	4573100	+		34648	11389	17085	17161	40488;40489	40488					-0.00757662267460546
TLVLYGSEE	9	Unmodified	_TLVLYGSEE_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	337.5078307986259	3	337.506207	1009.49679	2.8955	0.00097725	1.8005	0.00060767	4.696	0.0015849	337.5067874161491	91.752	0.48956	92.689	92.403	92.893	0.93623					44	15	4	0	0	0	0.16939	2	38623	38623;38676		36.506	5.2379	1	7609600	+		34649	11389	17085	17161	40490;40491	40490					-0.00757662267460546
TLVLYGSEE	9	Unmodified	_TLVLYGSEE_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.5074340701103	3	337.506207	1009.49679	2.8558	0.00096384	1.666	0.00056229	4.5218	0.0015261	337.50673112645313	91.332	0.4934	92.698	92.374	92.867	1.366					41	15	3	0	0	0	0.16939	1	38453	38453		36.506	5.2379	1	6270600	+		34650	11389	17085	17161	40492	40492					-0.00757662267460546
TLVLYGSEE	9	Unmodified	_TLVLYGSEE_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	337.506207	1009.49679	2.8955	0.00097725	1.8005	0.00060767	4.696	0.0015849	337.5067874161491	91.752	0.48956	92.689	92.403	92.893	0.93623	0.011064	-0.00013012	NaN	36.506	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7609600	+		34651	11389	17085	17161							-0.00757662267460546
TLVLYGSEE	9	Unmodified	_TLVLYGSEE_					0	0	0			REV__ENSG00000183324|ENST00000331090|REC114	REV__ENSG00000183324|ENST00000331090|REC114	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	337.506207	1009.49679	2.8558	0.00096384	1.666	0.00056229	4.5218	0.0015261	337.50673112645313	91.332	0.4934	92.698	92.374	92.867	1.366	0.020596	-0.00026623	NaN	36.506	41	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6270600	+		34652	11389	17085	17161							-0.00757662267460546
TLVMLKKKQY	10	Unmodified	_TLVMLKKKQY_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-11|APP	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	313.6926452517509	4	313.692793	1250.74206	0.49634	0.0001557	-0.47434	-0.0001488	0.021999	6.901E-06	313.6924856197585	31.201	0.69389	31.492	31.211	31.905	0.29086					81	22	5	0	0	0	0.8974	1	13073	13073		1.7423	1.0446	1	12502000			34653	2989	17086	17162	40493	40493					0.1267233966166259
TLVMLKKKQY	10	Unmodified	_TLVMLKKKQY_					0	0	0		nc|ENSG00000142192|P05067-10|APP;nc|ENSG00000142192|P05067-3|APP;nc|ENSG00000142192|P05067-4|APP;nc|ENSG00000142192|P05067-5|APP;nc|ENSG00000142192|P05067-6|APP;nc|ENSG00000142192|P05067-7|APP;nc|ENSG00000142192|P05067-8|APP;nc|ENSG00000142192|P05067-9|APP;ENSG00000142192|ENST00000346798|APP;nc|ENSG00000142192|P05067-11|APP	nc|ENSG00000142192|P05067-10|APP	nc|ENSG00000142192|P05067-10|APP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	313.6920654177666	4	313.692793	1250.74206	0.11039	3.4628E-05	-2.1581	-0.00067699	-2.0477	-0.00064236	313.691993126686	29.416	0.48679	31.215	31.02	31.506	1.7987					55	15	5	0	0	0	0.8974	1	12372	12372		1.7423	1.0446	1	16906000			34654	2989	17086	17162	40494	40494					0.1267233966166259
TLVPVGGG	8	Unmodified	_TLVPVGGG_					0	0	0			REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2071411013603	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89008	1	13644	13644		2.5775	0	1	2241600	+		34655	13266	17087	17163	40495	40495					0.03502770260206489
TLVPVGGG	8	Unmodified	_TLVPVGGG_					0	0	0			REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.2262145876884	2	350.205421	698.39629	0.95636	0.00033492	1.6768	0.00058723	2.6332	0.00092215	350.20567905414083	33.633	0.50525	33.93	33.791	34.296	0.29701					23	16	2	0	0	0	2.3239	1	14089	14089		2.5775	0	1	732040	+		34656	13266	17087	17163	40496	40496					0.03502770260206489
TLVPVGGG	8	Unmodified	_TLVPVGGG_					0	0	0			REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	350.205421	698.39629	-0.58385	-0.00020447	4.309	0.001509	3.7251	0.0013045	350.2066192635173	31.579	1.2224	32.861	32.057	33.28	1.2813	-0.13845	0.00044048	NaN	2.5775	67	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2829300	+		34657	13266	17087	17163							0.03502770260206489
TLVPVGGG	8	Unmodified	_TLVPVGGG_					0	0	0			REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	REV__ENST00000469080.5_1_X:47104878-47106896:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	350.205421	698.39629	0.40912	0.00014328	3.4035	0.0011919	3.8127	0.0013352	350.206276083627	31.125	1.1209	32.95	32.209	33.33	1.8246	-0.049297	-0.00019369	NaN	2.5775	70	37	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2481900	+		34658	13266	17087	17163							0.03502770260206489
TLVPVTRASV	10	Unmodified	_TLVPVTRASV_					0	0	0		ENST00000337179.9_1_12:93771723-93771948:+|nuORF	ENST00000337179.9_1_12:93771723-93771948:+|nuORF	ENST00000337179.9_1_12:93771723-93771948:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.2811767458916	2	521.816399	1041.61824	2.4517	0.0012793	0.90389	0.00047167	3.3556	0.001751	521.8168371481783	40.58	0.25167	41.89	41.756	42.008	1.3102					13	7	2	0	0	0	0.12357	1	17003	17003		21.537	0	1	581030			34659	5917	17088	17164	40497	40497					0.09910004885705348
TLVRLLKRL	9	Unmodified	_TLVRLLKRL_					0	0	0			REV__nc|ENSG00000196277|Q14831-5|GRM7	REV__nc|ENSG00000196277|Q14831-5|GRM7	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2613403201103	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.93	1	105.93	105.43	106.43	0								0	0	0	0.42693	1	45088	45088		0.23584	0	1		+		34660	11624	17089	17165	40498	40498					0.20914842698698521
TLVSFERLL	9	Unmodified	_TLVSFERLL_					0	0	0			REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3173095583916	2	539.318774	1076.623	1.5412	0.00083119	-2.7933	-0.0015065	-1.2521	-0.00067529	539.3171026353033	95.438	0.42587	95.438	95.236	95.662	0					30	14	3	0	0	0	0.66839	1	39864	39864		8.5933	0	1	3850000	+		34661	8754	17090	17166	40499	40499					0.08774889028472899
TLVSKQQLE	9	Unmodified	_TLVSKQQLE_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	349.1997558474541	3	349.201118	1044.58152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.33	1	101.33	100.83	101.83	0								0	0	0	0.42693	1	42429	42429		4.897	0	1				34662	2316	17091	17167	40500	40500					0.061017082691250835
TLVSRRSSL	9	Unmodified	_TLVSRRSSL_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8036071658134	2	509.803823	1017.59309	2.1115	0.0010764	-0.28504	-0.00014532	1.8265	0.00093113	509.8037018821231	64.963	0.86521	64.963	64.27	65.135	0					36	26	2	0	0	0	0.68551	1	27006	27006		7.9102	0.62092	1	769690	+		34663	11083	17092	17168	40501	40501					0.08499950083148633
TLVSRRSSL	9	Unmodified	_TLVSRRSSL_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.803823	1017.59309	2.1026	0.0010719	1.5433	0.00078676	3.6459	0.0018587	509.80429217284916	64.884	0.51175	65.21	65.131	65.643	0.32689	0.12373	0.001313	NaN	7.9102	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	704080	+		34664	11083	17092	17168							0.08499950083148633
TLVTGGGA	8	Unmodified	_TLVTGGGA_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	675.3704711794853	1	675.367181	674.359904	1.615	0.0010907	4.2958	0.0029013	5.9108	0.003992	675.3703963729674	32.433	0.37	32.433	32.257	32.627	0					15	11	2	0	0	0	0.87106	1	13610	13610		14.582	0	1	410330	+		34665	9907	17093	17169	40502	40502					0.009698933634808782
TLVTGGGA	8	Unmodified	_TLVTGGGA_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	675.367181	674.359904	1.615	0.0010907	4.2958	0.0029013	5.9108	0.003992	675.3703963729674	32.433	0.37	32.433	32.257	32.627	0	0.095504	-0.0017857	NaN	14.582	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410330	+		34666	9907	17093	17169							0.009698933634808782
TLVTGGGA	8	Unmodified	_TLVTGGGA_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	675.367181	674.359904	1.1646	0.00078657	6.7058	0.0045289	7.8705	0.0053155	675.3716428797119	32.092	0.40557	32.386	32.123	32.528	0.29431	0.048017	-0.00015807	NaN	14.582	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	840980	+		34667	9907	17093	17169							0.009698933634808782
TLVTGGGA	8	Unmodified	_TLVTGGGA_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	675.367181	674.359904	0.47924	0.00032366	8.3421	0.005634	8.8214	0.0059577	675.372796387812	30.957	0.44217	32.239	32.028	32.47	1.2821	-0.098482	0.00094703	NaN	14.582	23	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	805630	+		34668	9907	17093	17169							0.009698933634808782
TLVTGGGA	8	Unmodified	_TLVTGGGA_					0	0	0			REV__nc|ENSG00000165623|P07492-2|GRP	REV__nc|ENSG00000165623|P07492-2|GRP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	675.367181	674.359904	0.46687	0.00031531	8.1474	0.0055025	8.6143	0.0058178	675.3726622573683	30.478	0.49982	32.293	32.013	32.513	1.8151	-0.045039	0.00081556	NaN	14.582	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	834380	+		34669	9907	17093	17169							0.009698933634808782
TLVTRTQGTI	10	Unmodified	_TLVTRTQGTI_					0	0	0		ENST00000419176.1_1_10:70434132-70434327:+|nuORF	ENST00000419176.1_1_10:70434132-70434327:+|nuORF	ENST00000419176.1_1_10:70434132-70434327:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3177368044853	2	545.316763	1088.61897	1.4657	0.00079927	0.69295	0.00037787	2.1587	0.0011771	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.88022	1	30231	30231		3.5965	3.5965	1	5427600			34670	6434	17094	17170	40503	40503					0.07820799534783873
TLVYHVVGV	9	Unmodified	_TLVYHVVGV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;nc|ENSG00000189091|Q15393-2|SF3B3;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.7881042361259	2	493.78711	985.559667	1.4833	0.00073244	0.75832	0.00037445	2.2416	0.0011069	493.7876551280891	42.804	0.30434	42.804	42.634	42.939	0					25	9	3	0	0	0	0.069258	2	17935	17886;17935		60.39	26.287	1	2943200			34671	4895;15952	17095	17171	40504;40505	40505					0.06630948311237717
TLVYHVVGV	9	Unmodified	_TLVYHVVGV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;nc|ENSG00000189091|Q15393-2|SF3B3;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.7886230349541	2	493.78711	985.559667	2.4493	0.0012095	0.84105	0.0004153	3.2904	0.0016248	493.7874565163628	42.362	0.36751	42.682	42.513	42.88	0.32058					25	11	3	0	0	0	0.046276	2	17811	17763;17811		70.716	40.491	1	3192600			34672	4895;15952	17095	17171	40506;40507	40507					0.06630948311237717
TLVYHVVGV	9	Unmodified	_TLVYHVVGV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;nc|ENSG00000189091|Q15393-2|SF3B3;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7880126833916	2	493.78711	985.559667	2.3386	0.0011548	-1.0154	-0.00050139	1.3232	0.00065336	493.7867401994926	40.681	0.64907	42.007	41.592	42.241	1.3254					47	20	4	0	0	0	0.00029988	2	17051	17051;17092		137.59	82.812	1	11777000			34673	4895;15952	17095	17171	40508;40509	40508					0.06630948311237717
TLVYHVVGV	9	Unmodified	_TLVYHVVGV_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;nc|ENSG00000189091|Q15393-2|SF3B3;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7871887087822	2	493.78711	985.559667	2.0758	0.001025	-1.8041	-0.00089082	0.27173	0.00013418	493.78632380807704	40.259	0.65268	42.122	41.738	42.39	1.8624					43	20	3	0	0	0	0.0068741	2	16896	16850;16896		114.94	68.923	1	8700800			34674	4895;15952	17095	17171	40510;40511	40511					0.06630948311237717
TLWEQVGIYL	10	Unmodified	_TLWEQVGIYL_					0	0	0		ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.8311035037041	2	611.329339	1220.64412	2.3874	0.0014595	0.023493	1.4362E-05	2.4109	0.0014738	611.3294189430759	92.174	0.34327	92.174	91.978	92.321	0					18	10	2	0	0	0	0.65574	2	38489	38489;38542		20.454	8.7632	1	807900			34675	6791	17096	17172	40512;40513	40512					0.04262854337343924
TLWEQVGIYL	10	Unmodified	_TLWEQVGIYL_					0	0	0		ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3294555544853	2	611.329339	1220.64412	2.549	0.0015583	-0.3665	-0.00022405	2.1825	0.0013342	611.3290749214104	91.741	0.3567	91.931	91.755	92.112	0.19042					21	10	3	0	0	0	0.70618	1	38432	38432		18.146	5.1039	1	551340			34676	6791	17096	17172	40514	40514					0.04262854337343924
TLWEQVGIYL	10	Unmodified	_TLWEQVGIYL_					0	0	0		ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3322631716728	2	611.329339	1220.64412	4.0289	0.002463	1.9888	0.0012158	6.0178	0.0036788	611.3301167472779	90.945	0.44793	91.926	91.717	92.165	0.98157					30	13	3	0	0	0	0.057404	2	38325	38276;38325		75.761	45.124	1	2896600			34677	6791	17096	17172	40515;40516	40516					0.04262854337343924
TLWEQVGIYL	10	Unmodified	_TLWEQVGIYL_					0	0	0		ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	ENST00000477642.5_1_2:38525261-38527422:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3313476443291	2	611.329339	1220.64412	3.8235	0.0023374	-0.088372	-5.4024E-05	3.7351	0.0022834	611.3292831703527	90.514	0.42234	91.88	91.67	92.093	1.366					27	12	3	0	0	0	0.057404	2	38153	38103;38153		75.761	42.975	1	2934600			34678	6791	17096	17172	40517;40518	40518					0.04262854337343924
TLWGGLLRL	9	Unmodified	_TLWGGLLRL_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.8192016482353	2	514.816202	1027.61785	2.0687	0.001065	3.3605	0.0017301	5.4292	0.0027951	514.818161121006	80.134	0.27766	80.134	79.948	80.226	0					19	8	3	0	0	0	0.22154	1	33357	33357		30.637	12.502	1	1652800			34679	4372	17097	17173	40519	40519					0.10514629956514909
TLWGGLLRL	9	Unmodified	_TLWGGLLRL_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.8176757693291	2	514.816202	1027.61785	1.933	0.00099512	1.4248	0.00073352	3.3578	0.0017286	514.816640203411	79.483	0.41425	79.784	79.623	80.037	0.30046					27	12	3	0	0	0	0.30098	1	33219	33219		25.399	7.2643	1	1759900			34680	4372	17097	17173	40520	40520					0.10514629956514909
TLWGGLLRL	9	Unmodified	_TLWGGLLRL_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8173705935478	2	514.816202	1027.61785	2.917	0.0015017	0.13127	6.758E-05	3.0483	0.0015693	514.8159641518482	78.489	0.49078	79.756	79.543	80.034	1.2668					48	15	4	0	0	0	0.091139	3	32943	32900;32943;32987		52.268	18.166	1	4276300			34681	4372	17097	17173	40521;40522;40523	40522					0.10514629956514909
TLWGGLLRL	9	Unmodified	_TLWGGLLRL_					0	0	0		ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	ENSG00000175348|ENST00000534025|TMEM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8163940310478	2	514.816202	1027.61785	1.94	0.00099873	-0.016361	-8.4231E-06	1.9236	0.0009903	514.8160276275794	77.917	0.43622	79.668	79.495	79.932	1.7514					35	13	3	0	0	0	0.049839	2	32696	32651;32696		68.081	29.93	1	4139800			34682	4372	17097	17173	40524;40525	40525					0.10514629956514909
TLWGIQKEL	9	Unmodified	_TLWGIQKEL_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.3123657107353	2	544.310949	1086.60735	1.7047	0.00092789	-0.72811	-0.00039632	0.9766	0.00053157	544.3105654904751	53.085	0.44278	53.085	52.854	53.296	0					45	15	4	0	0	0	0.0051619	3	22130	22083;22130;22172		121.35	59.744	1	11010000			34683	2611	17098	17174	40526;40527;40528	40527					0.06750602511419856
TLWGIQKEL	9	Unmodified	_TLWGIQKEL_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.3123657107353	2	544.310949	1086.60735	1.7127	0.00093225	0.074029	4.0295E-05	1.7867	0.00097254	544.3108832159085	52.468	0.41496	52.794	52.559	52.974	0.32553					33	13	3	0	0	0	1.285E-05	3	21969	21925;21969;22008		179.17	90.22	1	14215000			34684	2611	17098	17174	40529;40530;40531	40530					0.06750602511419856
TLWGIQKEL	9	Unmodified	_TLWGIQKEL_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3114501833916	2	544.310949	1086.60735	0.55002	0.00029938	1.0872	0.0005918	1.6373	0.00089118	544.3115853538243	51.151	0.55211	52.545	52.316	52.868	1.3938					56	17	4	0	0	0	0.00033802	4	21443	21361;21405;21443;21483		135.86	73.291	1	29911000			34685	2611	17098	17174	40532;40533;40534;40535	40534					0.06750602511419856
TLWGIQKEL	9	Unmodified	_TLWGIQKEL_					0	0	0		ENSG00000134333|ENST00000422447|LDHA;nc|ENSG00000134333|P00338-3|LDHA;nc|ENSG00000134333|P00338-4|LDHA;ENST00000397561.3_1_9:14921337-14921451:-|nuORF;ENST00000538451.1_1_11:18424358-18428825:+|nuORF	ENSG00000134333|ENST00000422447|LDHA	ENSG00000134333|ENST00000422447|LDHA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3112060427666	2	544.310949	1086.60735	0.63557	0.00034595	0.2738	0.00014903	0.90937	0.00049498	544.3110270736992	50.585	0.57576	52.56	52.336	52.912	1.9753					52	18	4	0	0	0	0.00023236	3	21170	21125;21170;21209		140.63	67.665	1	31803000			34686	2611	17098	17174	40536;40537;40538	40537					0.06750602511419856
TLWIVYLW	8	Unmodified	_TLWIVYLW_					0	0	0		ENSG00000185864|ENST00000682606|NPIPB4;ENSG00000254206|ENST00000698511|NPIPB11;ENSG00000198064|ENST00000697092|NPIPB13;nc|ENSG00000243716|C9JG80|NPIPB4;ENSG00000243716|ENST00000424340|NPIPB5;nc|ENSG00000169246|Q92617|NPIPB3;nc|ENSG00000169246|Q92617-6|NPIPB3;ENSG00000169203|ENST00000550665|NPIPB12;nc|ENSG00000169246|Q92617-5|NPIPB3;nc|ENSG00000169246|Q92617-3|NPIPB3;nc|ENSG00000169246|Q92617-2|NPIPB3	ENSG00000185864|ENST00000682606|NPIPB4	ENSG00000185864|ENST00000682606|NPIPB4	MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3052856326103	2	547.307678	1092.6008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.216	1	41.533	41.033	42.033	0.31683								0	0	0	1.0178	1	17316	17316		2.5775	0	1				34687	4073	17099	17175	40539	40539					0.05820709350700781
TLWKYFRN	8	Unmodified	_TLWKYFRN_					0	0	0		ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	ENSG00000184210|ENST00000333026|DGAT2L6	MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3034545779228	2	564.303458	1126.59236	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.52	103.02	104.02	0.16445								0	0	0	1.0178	1	43556	43556		2.5775	0	1				34688	4683	17100	17176	40540	40540					0.03413155434077453
TLWPEVQKL	9	Unmodified	_TLWPEVQKL_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2;ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-7|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3210327029228	2	557.318774	1112.623	1.587	0.00088444	-0.52119	-0.00029047	1.0658	0.00059397	557.318610559677	54.922	0.96768	56.327	55.613	56.581	1.4048					49	31	2	0	0	0	0.063746	3	22968	22878;22968;23084		62.573	26.066	1	2236000			34689	2634	17101	17177	40541;40542;40543	40542					0.07118889028470221
TLWPEVQKL	9	Unmodified	_TLWPEVQKL_					0	0	0		nc|ENSG00000134759|Q6IA86-4|ELP2;ENSG00000134759|ENST00000358232|ELP2;ENST00000541294.1_1_18:33739943-33744659:+|nuORF;nc|ENSG00000134759|Q6IA86-7|ELP2;nc|ENSG00000134759|Q6IA86-2|ELP2;nc|ENSG00000134759|Q6IA86-3|ELP2;nc|ENSG00000134759|Q6IA86-5|ELP2;nc|ENSG00000134759|Q6IA86-6|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	nc|ENSG00000134759|Q6IA86-4|ELP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3188354372978	2	557.318774	1112.623	1.7851	0.00099489	-1.176	-0.00065539	0.60916	0.0003395	557.3181744509089	54.447	0.97947	56.416	55.688	56.668	1.9684					48	31	2	0	0	0	0.086433	3	22794	22703;22794;22902		53.833	29.159	1	1516300			34690	2634	17101	17177	40544;40545;40546	40545					0.07118889028470221
TLWTQVQI	8	Unmodified	_TLWTQVQI_					0	0	0			REV__tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	REV__tr|A0A553SUP2|A0A553SUP2_NIACIUvrABCsystemproteinAOS=NialliacirculansOX=1397GN=CEQ21_04190PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7803832888603	2	494.776742	987.538931	3.1275	0.0015474	2.8675	0.0014187	5.9949	0.0029661	494.77831787135574	75.373	0.50498	75.697	75.393	75.898	0.32464					31	15	3	0	0	0	0.80415	1	31466	31466		20.871	0	1	2414300	+		34691	15299	17102	17178	40547	40547					0.0446635793156247
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1121.552905261517	1	1121.55135	1120.54408	1.8637	0.0020903	-1.1105	-0.0012455	0.75318	0.00084472	1121.5501901371172	72.889	0.53223	72.889	72.684	73.216	0					47	16	4	0	0	0	2.0192E-05	5	30334	30292;30334;30373;30412;30461		172.91	107.67	1	18584000			34692	2577	17103	17179	40548;40549;40550;40551;40552	40549					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.2799560427666	2	561.279315	1120.54408	1.2885	0.00072319	0.18135	0.00010179	1.4698	0.00082497	561.2794181463661	72.888	0.5958	72.888	72.653	73.248	0					54	18	4	0	0	0	0.01454	4	30362	30312;30362;30400;30443		103.75	67.621	1	16085000			34693	2577	17103	17179	40553;40554;40555;40556	40554					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1121.553759753704	1	1121.55135	1120.54408	3.0029	0.0033679	-1.2395	-0.0013902	1.7634	0.0019777	1121.5499626013261	72.457	0.56657	72.782	72.515	73.082	0.32494					52	17	4	0	0	0	5.8475E-07	5	30291	30248;30291;30329;30368;30428		188.58	138.64	1	14576000			34694	2577	17103	17179	40557;40558;40559;40560;40561	40558					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.2803222537041	2	561.279315	1120.54408	1.8759	0.0010529	0.62892	0.000353	2.5048	0.0014059	561.2795784333538	72.478	0.76092	72.803	72.451	73.212	0.32494					66	23	4	0	0	0	0.01454	3	30266	30266;30304;30342		103.75	67.621	1	17781000			34695	2577	17103	17179	40562;40563;40564	40562					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1121.553393542767	1	1121.55135	1120.54408	1.8565	0.0020821	-0.23921	-0.00026829	1.6173	0.0018139	1121.550969090945	71.301	0.63397	72.643	72.364	72.998	1.3415					60	20	4	0	0	0	2.0192E-05	5	29952	29857;29902;29952;29992;30037		172.91	129.05	1	58623000			34696	2577	17103	17179	40565;40566;40567;40568;40569	40567					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2811157107353	2	561.279315	1120.54408	2.2479	0.0012617	0.54518	0.000306	2.7931	0.0015677	561.2793413618352	71.365	0.78915	72.706	72.364	73.153	1.3415					121	25	7	0	0	0	0.026836	2	29926	29926;29965		92.491	54.316	1	54625000			34697	2577	17103	17179	40570;40571	40570					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1121.553271472454	1	1121.55135	1120.54408	0.85277	0.00095642	0.98317	0.0011027	1.8359	0.0020591	1121.5524118511953	70.829	0.57578	72.667	72.441	73.017	1.8378					59	18	5	0	0	0	2.0192E-05	4	29705	29661;29705;29757;29814		172.91	129.05	1	57695000			34698	2577	17103	17179	40572;40573;40574;40575	40573					-0.011373829964895776
TLWVDPYEV	9	Unmodified	_TLWVDPYEV_					0	0	0		ENSG00000159388|ENST00000290551|BTG2;ENSG00000133639|ENST00000256015|BTG1	ENSG00000159388|ENST00000290551|BTG2	ENSG00000159388|ENST00000290551|BTG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2808105349541	2	561.279315	1120.54408	0.90846	0.0005099	1.958	0.001099	2.8664	0.0016089	561.2803067552844	70.889	0.70036	72.727	72.411	73.111	1.8378					67	22	4	0	0	0	0.01454	3	29756	29716;29756;29816		103.75	58.049	1	69886000			34699	2577	17103	17179	40576;40577;40578	40577					-0.011373829964895776
TLWYKIFTT	9	Unmodified	_TLWYKIFTT_					0	0	0		ENST00000484751.1_1_7:66410067-66416200:+|nuORF;ENSG00000106609|ENST00000341567|TMEM248	ENST00000484751.1_1_7:66410067-66416200:+|nuORF;ENSG00000106609|ENST00000341567|TMEM248	ENST00000484751.1_1_7:66410067-66416200:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	586.7810546755791	2	586.82115	1171.62775	1.8259	0.0010715	-1.1655	-0.00068394	0.66044	0.00038756	587.3196971364359	67.271	0.14946	68.66	68.557	68.706	1.3887					6	4	2	0	0	0	0.098208	1	28234	28234		24.021	4.7636	1	395650			34700	6851;1574	17104	17180	40579	40579					0.048797731712284076
TLWYRAPEV	9	Unmodified	_TLWYRAPEV_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6;nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8030273318291	2	567.800749	1133.58694	1.6609	0.00094306	1.632	0.00092664	3.2929	0.0018697	567.8020113813055	47.174	0.28668	47.174	46.99	47.277	0					20	8	3	0	0	0	0.28372	2	19690	19690;19744		26.268	9.1552	1	924170			34701	1544;2667	17105	17181	40580;40581	40580					0.025494318515939085
TLWYRAPEV	9	Unmodified	_TLWYRAPEV_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6;nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.8020507693291	2	567.800749	1133.58694	1.6414	0.00093196	0.83231	0.00047259	2.4737	0.0014045	567.8009927110302	46.698	0.32337	47.028	46.878	47.201	0.33034					23	10	3	0	0	0	0.35391	2	19599	19555;19599		22.736	7.898	1	1001000			34702	1544;2667	17105	17181	40582;40583	40583					0.025494318515939085
TLWYRAPEV	9	Unmodified	_TLWYRAPEV_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6;nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8018066287041	2	567.800749	1133.58694	2.4967	0.0014176	-0.049324	-2.8006E-05	2.4474	0.0013896	567.8004242099248	45.149	0.35544	46.514	46.337	46.692	1.3653					32	10	4	0	0	0	0.034867	2	18938	18899;18938		80.676	34.976	1	6166300			34703	1544;2667	17105	17181	40584;40585	40585					0.025494318515939085
TLWYRAPEV	9	Unmodified	_TLWYRAPEV_					0	0	0		ENST00000473078.1_1_7:92300738-92355023:-|nuORF;ENSG00000105810|ENST00000424848|CDK6;nc|ENSG00000135446|P11802-2|CDK4;ENSG00000135446|ENST00000257904|CDK4	ENST00000473078.1_1_7:92300738-92355023:-|nuORF;nc|ENSG00000135446|P11802-2|CDK4	nc|ENSG00000135446|P11802-2|CDK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8013793826103	2	567.800749	1133.58694	2.0818	0.001182	0.4926	0.0002797	2.5744	0.0014617	567.8006858115871	44.595	0.35316	46.555	46.382	46.735	1.9596					20	10	2	0	0	0	0.045139	3	18684	18645;18684;18721		71.708	35.202	1	4861000			34704	1544;2667	17105	17181	40586;40587;40588	40587					0.025494318515939085
TLWYRPPEL	9	Unmodified	_TLWYRPPEL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13;CDK13|p.I875V|1|0.07|ENSG00000065883|chr7:40062848-40062848|A/G|missense_variant;ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9;CDK12|p.E928Gfs*27|1|0.54|ENSG00000167258|chr17:39515740-39515741|-/G|frameshift_variant;nc|ENSG00000167258|Q9NYV4-3|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;ENSG00000167258|ENST00000447079|CDK12	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	587.8189575076103	2	587.816399	1173.61824	2.101	0.001235	-0.047475	-2.7906E-05	2.0535	0.0012071	588.3173832439313	58.4	0.41974	58.4	58.17	58.59	0					17	12	2	0	0	0	0.46566	1	24338	24338		17.113	2.2746	1	577930			34705	795	17106	17182	40589	40589					0.038380048857106885
TLWYRPPEL	9	Unmodified	_TLWYRPPEL_					0	0	0		nc|ENSG00000065883|Q14004-2|CDK13;ENSG00000065883|ENST00000181839|CDK13;CDK13|p.I875V|1|0.07|ENSG00000065883|chr7:40062848-40062848|A/G|missense_variant;ENSG00000136807|ENST00000373264|CDK9;nc|ENSG00000136807|P50750-2|CDK9;CDK12|p.E928Gfs*27|1|0.54|ENSG00000167258|chr17:39515740-39515741|-/G|frameshift_variant;nc|ENSG00000167258|Q9NYV4-3|CDK12;nc|ENSG00000167258|Q9NYV4-2|CDK12;ENSG00000167258|ENST00000447079|CDK12	nc|ENSG00000065883|Q14004-2|CDK13	nc|ENSG00000065883|Q14004-2|CDK13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8179809451103	2	587.816399	1173.61824	1.0712	0.00062964	-1.1223	-0.00065969	-0.051115	-3.0046E-05	587.8160483646794	56.429	0.49295	57.843	57.69	58.183	1.4145					28	15	2	0	0	0	0.25667	1	23732	23732		27.629	3.6082	1	1697200			34706	795	17106	17182	40590	40590					0.038380048857106885
TLWYRSPEV	9	Unmodified	_TLWYRSPEV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7994262576103	2	575.798206	1149.58186	1.9562	0.0011264	1.3444	0.00077408	3.3006	0.0019005	575.7987813916923	40.131	0.34532	41.993	41.768	42.114	1.8624					16	10	2	0	0	0	0.55689	1	16828	16828		13.042	5.7532	1	693780			34707	179	17107	17183	40591	40591					0.013051279889850775
TLWYRSPEV	9	Unmodified	_TLWYRSPEV_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	575.798206	1149.58186	2.2602	0.0013014	-0.077337	-4.453E-05	2.1829	0.0012569	575.7985696716145	40.567	0.28059	41.877	41.695	41.976	1.3102	-0.058107	-0.00075512	NaN	13.042	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	629310			34708	179	17107	17183							0.013051279889850775
TLYELYSGKI	10	Unmodified	_TLYELYSGKI_					0	0	0		PRPF4B|p.T884S|1|0.3|ENSG00000112739|chr6:4057105-4057105|C/G|missense_variant	PRPF4B|p.T884S|1|0.3|ENSG00000112739|chr6:4057105-4057105|C/G|missense_variant	PRPF4B|p.T884S|1|0.3|ENSG00000112739|chr6:4057105-4057105|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.8246337771416	2	593.821347	1185.62814	2.6876	0.001596	-0.38736	-0.00023002	2.3003	0.001366	593.8214084159065	44.892	0.25199	46.258	46.149	46.401	1.3653					18	7	3	0	0	0	0.72878	1	18815	18815		17.113	0.96379	1	1262200			34709	8063	17108	17184	40592	40592					0.04275148100441584
TLYLSQQNI	9	Unmodified	_TLYLSQQNI_					0	0	0		ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.2913085818291	2	540.290214	1078.56587	2.5379	0.0013712	0.35875	0.00019383	2.8966	0.001565	540.2900047003263	75.213	0.28783	75.538	75.361	75.649	0.32464					15	8	3	0	0	0	0.5697	1	31464	31464		12.532	0	1	1088500			34710	5769	17109	17185	40593	40593					0.029734217520854145
TLYLSQQNI	9	Unmodified	_TLYLSQQNI_					0	0	0		ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	540.290214	1078.56587	1.6986	0.00091772	0.92993	0.00050243	2.6285	0.0014201	540.2909369510187	75.641	0.28457	75.641	75.439	75.723	0	0.066601	0.00048884	NaN	12.532	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	829850			34711	5769	17109	17185							0.029734217520854145
TLYLSQQNI	9	Unmodified	_TLYLSQQNI_					0	0	0		ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	ENST00000303575.8_1_14:75601519-75601588:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	540.290214	1078.56587	3.4762	0.0018781	-1.7994	-0.00097219	1.6768	0.00090595	540.2876016534422	74.227	0.30692	75.545	75.374	75.681	1.318	-0.029626	-0.0024604	NaN	12.532	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6019700			34712	5769	17109	17185							0.029734217520854145
TLYLTLQTL	9	Unmodified	_TLYLTLQTL_					0	0	0			REV__nc|ENSG00000103599|Q86VS3-4|IQCH	REV__nc|ENSG00000103599|Q86VS3-4|IQCH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.7825195193291	2	533.313158	1064.61176	1.7185	0.00091649	1.57	0.0008373	3.2885	0.0017538	533.3141879519233	71.282	0.31079	73.106	72.88	73.191	1.824					22	9	3	0	0	0	0.097511	1	29870	29870		11.64	4.3511	1	2430700	+		34713	9115	17110	17186	40594	40594					0.08204066934331422
TLYLTYWL	8	Unmodified	_TLYLTYWL_					0	0	0			REV__ENSG00000152034|ENST00000281806|MCHR2	REV__ENSG00000152034|ENST00000281806|MCHR2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1639892458916	2	536.789318	1071.56408	1.8896	0.0010143	-4.4624	-0.0023954	-2.5728	-0.0013811	536.7877745808016	78.1	0.25675	78.409	78.291	78.548	0.30932					10	7	2	0	0	0	2.3239	1	32698	32698		2.5775	0.51773	1	487710	+		34714	10410	17111	17187	40595	40595					0.03116412734129881
TLYRILQRRFL	11	Unmodified	_TLYRILQRRFL_					0	0	0		TG|p.N967Rfs*35|1|0.08|ENSG00000042832|chr8:132893826-132893829|GAAT/-|frameshift_variant;TG|p.Q1926Sfs*11|1|0.04|ENSG00000042832|chr8:132967881-132967896|CACAGGTGTGTGATGA/-|frameshift_variant;TG|p.S2274Lfs*71|1|0.03|ENSG00000042832|chr8:133019639-133019640|-/TG|frameshift_variant;nc|ENSG00000042832|P01266-2|TG;ENSG00000042832|ENST00000220616|TG	TG|p.N967Rfs*35|1|0.08|ENSG00000042832|chr8:132893826-132893829|GAAT/-|frameshift_variant	TG|p.N967Rfs*35|1|0.08|ENSG00000042832|chr8:132893826-132893829|GAAT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	740.3983642458916	2	739.951353	1477.88815	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.755	1	98.011	97.511	98.511	0.25636								0	0	0	0.63775	1	41128	41128		1.3295	0	1				34715	667	17112	17188	40596	40596					0.16832358221904542
TLYVVTQAEQ	10	Unmodified	_TLYVVTQAEQ_					0	0	0			REV__tr|A0A7D6ZVC8|A0A7D6ZVC8_9CLOTTypeIIsecretionsystemproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14580PE=4SV=1	REV__tr|A0A7D6ZVC8|A0A7D6ZVC8_9CLOTTypeIIsecretionsystemproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14580PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3005859255791	2	576.300778	1150.587	0.48181	0.00027766	-2.9153	-0.0016801	-2.4335	-0.0014024	576.2990166521639	14.858	0.18625	14.858	14.781	14.967	0					11	5	3	0	0	0	0.76954	1	6164	6164		15.248	0.8431	1	816610	+		34716	15731	17113	17189	40597	40597					0.01773387060939058
TMADQIVTV	9	Unmodified	_TMADQIVTV_					0	0	0		STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant;ENSG00000116266|ENST00000370008|STXBP3	STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant	STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2531310915947	2	489.252243	976.489932	2.067	0.0010113	-0.022313	-1.0917E-05	2.0447	0.0010004	489.2522367499025	44.664	0.35088	46.623	46.448	46.799	1.9596					25	10	3	0	0	0	0.098163	1	18736	18736		49.933	9.9757	1	2142400			34717	1965	17114	17190	40598	40598					0.0007470158031992469
TMADQIVTV	9	Unmodified	_TMADQIVTV_					0	0	0		STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant;ENSG00000116266|ENST00000370008|STXBP3	STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant	STXBP3|p.N396Mfs*7|1|0.17|ENSG00000116266|chr1:108796307-108796316|TCAACAAAAA/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	489.252243	976.489932	2.48	0.0012134	-0.98316	-0.00048101	1.4969	0.00073235	489.25174234778507	45.149	0.3237	46.514	46.369	46.692	1.3653	-0.054417	-0.00056055	NaN	49.933	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1984800			34718	1965	17114	17190							0.0007470158031992469
TMEEEKEKEQR	11	Unmodified	_TMEEEKEKEQR_					0	0	0		nc|ENSG00000111879|Q8NB25-4|FAM184A;nc|ENSG00000111879|Q8NB25-2|FAM184A;nc|ENSG00000111879|Q8NB25-3|FAM184A;ENSG00000111879|ENST00000338891|FAM184A	nc|ENSG00000111879|Q8NB25-4|FAM184A	nc|ENSG00000111879|Q8NB25-4|FAM184A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.5631286501884	3	479.561046	1435.66131	1.8453	0.00088495	1.8853	0.00090409	3.7306	0.001789	479.56249113049984	46.453	0.43331	47.828	47.617	48.051	1.3751					30	13	3	0	0	0	1.0131	1	19445	19445		1.2148	0.10508	1	2223000			34719	1759	17115	17191	40599	40599					-0.03909637909828234
TMIDFPQMV	9	Unmodified	_TMIDFPQMV_					0	0	0		nc|ENSG00000058729|Q9BVS4-2|RIOK2;ENSG00000058729|ENST00000283109|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.2595703005791	2	541.256471	1080.49839	2.4285	0.0013144	-0.35426	-0.00019175	2.0742	0.0011227	541.25687511379	75.631	0.30826	75.953	75.804	76.112	0.32163					13	9	2	0	0	0	0.46905	1	31638	31638		16.942	8.349	1	572380			34720	738	17116	17192	40600	40600					-0.038640677747252994
TMIDFPQMV	9	Unmodified	_TMIDFPQMV_					0	0	0		nc|ENSG00000058729|Q9BVS4-2|RIOK2;ENSG00000058729|ENST00000283109|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2560302615166	2	541.256471	1080.49839	3.2864	0.0017788	-3.0753	-0.0016645	0.21106	0.00011424	541.2549461176145	74.62	0.33343	75.926	75.756	76.09	1.3063					24	10	3	0	0	0	0.15635	2	31300	31300;31353		37.974	17.103	1	1675200			34721	738	17116	17192	40601;40602	40601					-0.038640677747252994
TMIDFPQMV	9	Unmodified	_TMIDFPQMV_					0	0	0		nc|ENSG00000058729|Q9BVS4-2|RIOK2;ENSG00000058729|ENST00000283109|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2590209841728	2	541.256471	1080.49839	3.0421	0.0016466	-1.8348	-0.00099309	1.2073	0.00065346	541.2562386164809	74.145	0.30567	75.941	75.808	76.114	1.7962					22	9	3	0	0	0	0.049839	1	31115	31115		68.081	37.856	1	2188000			34722	738	17116	17192	40603	40603					-0.038640677747252994
TMIDFPQMV	9	Unmodified	_TMIDFPQMV_					0	0	0		nc|ENSG00000058729|Q9BVS4-2|RIOK2;ENSG00000058729|ENST00000283109|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	nc|ENSG00000058729|Q9BVS4-2|RIOK2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	541.256471	1080.49839	1.6636	0.00090041	-2.0387	-0.0011035	-0.37515	-0.00020305	541.2564409820529	76.093	0.21671	76.093	75.948	76.164	0	0.11447	1.1575E-05	NaN	68.081	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570130			34723	738	17116	17192							-0.038640677747252994
TMILLGRI	8	Unmodified	_TMILLGRI_					0	0	0			REV__ENST00000490021.2_1_1:110230450-110231321:+|nuORF	REV__ENST00000490021.2_1_1:110230450-110231321:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	458.7890807986259	2	458.786056	915.557558	2.9158	0.0013377	2.3331	0.0010704	5.2489	0.0024081	458.78710957741566	76.155	1.3721	76.476	76.112	77.484	0.32163					82	43	3	0	0	0	0.89152	1	31759	31759		0.69038	0	1	404520000	+		34724	13418	17117	17193	40604	40604					0.09640196301768356
TMIMALIL	8	Unmodified	_TMIMALIL_					0	0	0		tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	905.5222656130791	1	905.519859	904.512582	2.8306	0.0025632	1.034	0.00093629	3.8646	0.0034995	905.5209006543569	107.73	0.14641	107.89	107.83	107.97	0.15781					15	7	3	0	0	0	0.89176	1	46427	46427		0.79363	0	1	56301000			34725	16804	17118	17194	40605	40605					0.056506294442442595
TMIMALIL	8	Unmodified	_TMIMALIL_					0	0	0		tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	905.519859	904.512582	3.0581	0.0027692	0.29948	0.00027119	3.3576	0.0030403	905.5206875075382	107.73	0.14893	107.89	107.79	107.94	0.15795	0.04996	-0.00098489	NaN	0.79363	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59988000			34726	16804	17118	17194							0.056506294442442595
TMKKRPKEKL	10	Unmodified	_TMKKRPKEKL_					0	0	0			REV__ENST00000507103.1_1_4:190881915-190881972:+|nuORF	REV__ENST00000507103.1_1_4:190881915-190881972:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2606994509697	3	420.260314	1257.75911	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.29	1	101.36	100.86	101.86	0.067009								0	0	0	0.66227	1	42410	42410		0.62683	0.21856	1		+		34727	13543	17119	17195	40606	40606					0.140542602674941
TMLELLNQL	9	Unmodified	_TMLELLNQL_					0	0	0		ENST00000441073.1_1_9:19027536-19027863:+|nuORF;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;ENST00000405257.1_1_6:4703010-4703685:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5;ENSG00000165916|ENST00000298852|PSMC3;ENSG00000100764|ENST00000261303|PSMC1	ENST00000441073.1_1_9:19027536-19027863:+|nuORF	ENST00000441073.1_1_9:19027536-19027863:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7973510622978	2	537.796817	1073.57908	4.0774	0.0021928	-1.7146	-0.00092211	2.3628	0.0012707	537.7958015508586	82.089	0.31241	83.302	83.099	83.411	1.2125					24	9	3	0	0	0	0.19075	1	34470	34470		34.102	0	1	1195500			34728	1085	17120	17196	40607	40607					0.04523536539818451
TMLELLNQL	9	Unmodified	_TMLELLNQL_					0	0	0		ENST00000441073.1_1_9:19027536-19027863:+|nuORF;ENST00000555787.1_1_14:90734518-90735894:+|nuORF;ENST00000405257.1_1_6:4703010-4703685:+|nuORF;nc|ENSG00000100764|P62191-2|PSMC1;ENST00000579147.5_1_17:61906826-61909326:+|nuORF;nc|ENSG00000087191|P62195-2|PSMC5;ENSG00000087191|ENST00000310144|PSMC5;ENSG00000165916|ENST00000298852|PSMC3;ENSG00000100764|ENST00000261303|PSMC1	ENST00000441073.1_1_9:19027536-19027863:+|nuORF	ENST00000441073.1_1_9:19027536-19027863:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	537.796817	1073.57908	4.0938	0.0022016	-1.9398	-0.0010432	2.154	0.0011584	537.7960794405149	81.609	0.30775	83.305	83.136	83.444	1.6959	0.0017113	-9.896E-05	NaN	34.102	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1041800			34729	1085	17120	17196							0.04523536539818451
TMLFSGNYSME	11	Unmodified	_TMLFSGNYSME_					0	0	0			REV__ENSG00000136478|ENST00000584379|TEX2	REV__ENSG00000136478|ENST00000584379|TEX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.2686645388603	2	640.270306	1278.52606	2.691	0.0017229	-3.8749	-0.002481	-1.184	-0.00075806	640.2680088511771	64.707	0.34105	66.114	66.047	66.388	1.4071					27	10	4	0	0	0	0.46674	1	27149	27149		24.991	3.2443	1	8334000	+		34730	9983	17121	17197	40608	40608					-0.10206209305124503
TMLFSGNYSME	11	Unmodified	_TMLFSGNYSME_					0	0	0			REV__ENSG00000136478|ENST00000584379|TEX2	REV__ENSG00000136478|ENST00000584379|TEX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	640.2831298708916	2	640.270306	1278.52606	2.691	0.0017229	-3.8749	-0.002481	-1.184	-0.00075806	640.2680088511771	64.707	0.34105	66.114	66.047	66.388	1.4071					27	10	4	0	0	0	0.13599	1	27119	27119		34.932	13.395	1	8334000	+		34731	9983	17121	17197	40609	40609					-0.10206209305124503
TMLGKFYHF	9	Unmodified	_TMLGKFYHF_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.8606140017509	3	381.860039	1142.55829	1.7999	0.00068731	-0.91361	-0.00034887	0.8863	0.00033844	381.8598428340305	44.613	0.41085	45.978	45.738	46.149	1.3653					33	12	3	0	0	0	0.09539	2	18716	18664;18716		38.176	19.454	1	11551000			34732	3732	17122	17198	40610;40611	40611					-0.007290090491778756
TMLGKFYHF	9	Unmodified	_TMLGKFYHF_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2883788943291	2	572.28642	1142.55829	2.5707	0.0014712	-0.50807	-0.00029076	2.0626	0.0011804	572.2859783817144	44.613	0.63052	45.978	45.738	46.369	1.3653					39	19	3	0	0	0	0.22519	1	18665	18665		30.225	6.2042	1	5466600			34733	3732	17122	17198	40612	40612					-0.007290090491778756
TMLGKFYHF	9	Unmodified	_TMLGKFYHF_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2875244021416	2	572.28642	1142.55829	2.2473	0.0012861	-0.17133	-9.8049E-05	2.076	0.001188	572.2867323928152	43.935	0.47604	45.879	45.639	46.115	1.9438					44	14	4	0	0	0	0.029061	2	18424	18375;18424		88.954	45.096	1	2318500			34734	3732	17122	17198	40613;40614	40614					-0.007290090491778756
TMLGKFYHF	9	Unmodified	_TMLGKFYHF_					0	0	0		nc|ENSG00000163913|Q9HBG6-11|IFT122;ENST00000506507.5_1_3:129168750-129233481:+|nuORF;nc|ENSG00000163913|Q9HBG6-4|IFT122;nc|ENSG00000163913|Q9HBG6-3|IFT122;nc|ENSG00000163913|Q9HBG6-6|IFT122;ENSG00000163913|ENST00000348417|IFT122;nc|ENSG00000163913|Q9HBG6-5|IFT122;nc|ENSG00000163913|Q9HBG6-7|IFT122;nc|ENSG00000163913|Q9HBG6-10|IFT122;nc|ENSG00000163913|Q9HBG6-8|IFT122;nc|ENSG00000163913|Q9HBG6-9|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	nc|ENSG00000163913|Q9HBG6-11|IFT122	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.8607665896416	3	381.860039	1142.55829	1.9531	0.00074579	-0.82187	-0.00031384	1.1312	0.00043196	381.8599065160331	43.902	0.41467	45.845	45.639	46.053	1.9438					43	12	4	0	0	0	0.09539	3	18385	18385;18436;18483		38.176	30.02	1	8184300			34735	3732	17122	17198	40615;40616;40617	40615					-0.007290090491778756
TMLLKKFRK	9	Unmodified	_TMLLKKFRK_					0	0	0		ENST00000319888.10_1_18:2538642-2538774:-|nuORF	ENST00000319888.10_1_18:2538642-2538774:-|nuORF	ENST00000319888.10_1_18:2538642-2538774:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1860229372978	3	388.914366	1163.72127	1.0541	0.00040995	4.0139	0.0015611	5.068	0.001971	388.9164357417833	38.769	0.48151	40.606	40.335	40.817	1.8366					20	14	2	0	0	0	0.11941	1	16182	16182		0.23584	0.23584	1	675560			34736	5842	17123	17199	40618	40618					0.1459579407264755
TMMFTFHKF	9	Unmodified	_TMMFTFHKF_					0	0	0		ENSG00000197747|ENST00000368811|S100A10;ENST00000478574.5_1_1:151956596-151958706:-|nuORF;ENST00000478348.1_1_1:151957748-151958706:-|nuORF	ENSG00000197747|ENST00000368811|S100A10	ENSG00000197747|ENST00000368811|S100A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	397.1889221072197	3	397.189279	1188.54601	1.6949	0.00067321	-1.0105	-0.00040137	0.6844	0.00027184	397.18868264167696	47.775	0.46979	49.157	48.858	49.328	1.3825					33	14	4	0	0	0	0.28372	1	19984	19984		30.703	26.514	1	3511100			34737	5024	17124	17200	40619	40619					-0.04072368783886304
TMMFTFHKF	9	Unmodified	_TMMFTFHKF_					0	0	0		ENSG00000197747|ENST00000368811|S100A10;ENST00000478574.5_1_1:151956596-151958706:-|nuORF;ENST00000478348.1_1_1:151957748-151958706:-|nuORF	ENSG00000197747|ENST00000368811|S100A10	ENSG00000197747|ENST00000368811|S100A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	397.1898986697197	3	397.189279	1188.54601	2.4198	0.0009611	-1.4928	-0.00059291	0.927	0.0003682	397.1884111889939	47.291	0.49413	49.267	49.031	49.526	1.976					36	15	3	0	0	0	0.17276	2	19796	19796;19851		33.445	27.253	1	3557600			34738	5024	17124	17200	40620;40621	40620					-0.04072368783886304
TMMFTFHKF	9	Unmodified	_TMMFTFHKF_					0	0	0		ENSG00000197747|ENST00000368811|S100A10;ENST00000478574.5_1_1:151956596-151958706:-|nuORF;ENST00000478348.1_1_1:151957748-151958706:-|nuORF	ENSG00000197747|ENST00000368811|S100A10	ENSG00000197747|ENST00000368811|S100A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2796508669853	2	595.28028	1188.54601	2.6427	0.0015731	-2.717	-0.0016174	-0.07436	-4.4265E-05	595.2777539319051	47.294	0.18636	49.27	49.156	49.343	1.976					11	5	3	0	0	0	0.25667	1	19816	19816		27.629	20.906	1	848840			34739	5024	17124	17200	40622	40622					-0.04072368783886304
TMMMFFPVVS	10	Unmodified	_TMMMFFPVVS_					0	0	0			REV__tr|A0A7D6ZJ33|A0A7D6ZJ33_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06985PE=4SV=1	REV__tr|A0A7D6ZJ33|A0A7D6ZJ33_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06985PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2807494997978	2	595.276349	1188.53814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.773	1	49.155	48.655	49.655	1.3825								0	0	0	0.65227	1	19998	19998		13.906	3.8321	1		+		34740	15668	17125	17201	40623	40623					-0.04858264095651066
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1729919314384	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.41	1	80.41	79.91	80.91	0								0	0	0	0.63775	1	33483	33483		0.094841	0	1				34741	17252	17126	17202	40624	40624					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1729308962822	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.531	1	80.531	80.031	81.031	0								0	0	0	0.63775	1	33533	33533		0.094841	0	1				34742	17252	17126	17202	40625	40625					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1729614138603	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.939	1	80.939	80.439	81.439	0								0	0	0	0.63775	1	33704	33704		0.094841	0	1				34743	17252	17126	17202	40626	40626					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1728698611259	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.209	1	81.209	80.709	81.709	0								0	0	0	0.63775	1	33816	33816		0.094841	0	1				34744	17252	17126	17202	40627	40627					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1730224490166	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.339	1	81.339	80.839	81.839	0								0	0	0	0.63775	1	33872	33872		0.094841	0	1				34745	17252	17126	17202	40628	40628					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1725036501884	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.589	1	81.589	81.089	82.089	0								0	0	0	0.63775	1	33983	33983		0.094841	0	1				34746	17252	17126	17202	40629	40629					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1726257205009	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.837	1	81.837	81.337	82.337	0								0	0	0	0.63775	1	34089	34089		0.094841	0	1				34747	17252	17126	17202	40630	40630					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1724426150322	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.952	1	81.952	81.452	82.452	0								0	0	0	0.63775	1	34138	34138		0.094841	0	1				34748	17252	17126	17202	40631	40631					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1725036501884	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.08	1	82.08	81.58	82.58	0								0	0	0	0.63775	1	34192	34192		0.094841	0	1				34749	17252	17126	17202	40632	40632					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1721069216728	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.184	1	82.184	81.684	82.684	0								0	0	0	0.63775	1	34236	34236		0.094841	0	1				34750	17252	17126	17202	40633	40633					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1727477908134	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.315	1	82.315	81.815	82.815	0								0	0	0	0.63775	1	34292	34292		0.094841	0	1				34751	17252	17126	17202	40634	40634					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1726867556572	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.444	1	82.444	81.944	82.944	0								0	0	0	0.63775	1	34346	34346		0.094841	0	1				34752	17252	17126	17202	40635	40635					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1725341677666	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.575	1	82.575	82.075	83.075	0								0	0	0	0.63775	1	34402	34402		0.094841	0	1				34753	17252	17126	17202	40636	40636					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1727477908134	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.875	1	82.875	82.375	83.375	0								0	0	0	0.63775	1	34528	34528		0.094841	0	1				34754	17252	17126	17202	40637	40637					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1728393435478	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.973	1	82.973	82.473	83.473	0								0	0	0	0.63775	1	34570	34570		0.094841	0	1				34755	17252	17126	17202	40638	40638					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1726867556572	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.19	1	83.19	82.69	83.69	0								0	0	0	0.63775	1	34663	34663		0.094841	0	1				34756	17252	17126	17202	40639	40639					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1726562380791	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.39	1	83.39	82.89	83.89	0								0	0	0	0.63775	1	34747	34747		0.094841	0	1				34757	17252	17126	17202	40640	40640					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1730224490166	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.546	1	83.546	83.046	84.046	0								0	0	0	0.63775	1	34813	34813		0.094841	0	1				34758	17252	17126	17202	40641	40641					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1728393435478	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.712	1	95.835	95.335	96.335	0.12331								0	0	0	0.63775	1	40055	40055		0.094841	0	1				34759	17252	17126	17202	40642	40642					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1731140017509	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.933	1	96.038	95.538	96.538	0.105								0	0	0	0.63775	1	40152	40152		0.094841	0	1				34760	17252	17126	17202	40643	40643					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1753417849541	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.042	1	96.147	95.647	96.647	0.105								0	0	0	0.63775	1	40196	40196		0.094841	0	1				34761	17252	17126	17202	40644	40644					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1731445193291	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.221	1	52.614	52.114	53.114	1.3938								0	0	0	0.63775	1	21446	21446		0.094841	0	1				34762	17252	17126	17202	40645	40645					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1716491580009	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.908	1	53.305	52.805	53.805	1.3966								0	0	0	0.63775	1	21734	21734		0.094841	0	1				34763	17252	17126	17202	40646	40646					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1723815798759	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.699	1	57.109	56.609	57.609	1.4099								0	0	0	0.63775	1	23338	23338		0.094841	0	1				34764	17252	17126	17202	40647	40647					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1724426150322	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.084	1	32.908	32.408	33.408	1.8246								0	0	0	0.63775	1	13030	13030		0.094841	0	1				34765	17252	17126	17202	40648	40648					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1725952029228	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.418	1	34.243	33.743	34.743	1.8246								0	0	0	0.63775	1	13588	13588		0.094841	0	1				34766	17252	17126	17202	40649	40649					-0.1792215941950417
TMMQFSYSCDY	11	Unmodified	_TMMQFSYSCDY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1727783083916	3	459.171625	1374.49305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.145	1	70.998	70.498	71.498	1.853								0	0	0	0.63775	1	29015	29015		0.094841	0	1				34767	17252	17126	17202	40650	40650					-0.1792215941950417
TMTGFILLV	9	Oxidation (M)	_TM(Oxidation (M))TGFILLV_		TM(1)TGFILLV		TM(44)TGFILLV	0	0	1			REV__ENSG00000073734|ENST00000650372|ABCB11	REV__ENSG00000073734|ENST00000650372|ABCB11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1010.560290515423	1	1010.55908	1009.5518	2.156	0.0021787	-2.5585	-0.0025855	-0.40248	-0.00040673	1010.5565037486618	78.991	0.37113	80.726	80.506	80.877	1.735					18	11	2	0	0	0	0.11478	1	33091	33091		44.407	6.2558	1	1761900	+		34768	8746	17127	17203	40651	40651		116			0.04741052999463591
TNAKLAAG	8	Unmodified	_TNAKLAAG_					0	0	0			REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.2129394412041	2	373.213778	744.413003	-0.31195	-0.00011642	-1.2932	-0.00048262	-1.6051	-0.00059905	373.2131797754171	63.817	0.49053	63.817	63.556	64.046	0					29	15	2	0	0	0	0.89051	1	26637	26637		2.3027	0	1	16079000	+		34769	13956	17128	17204	40652	40652					0.030572711461331892
TNAKLAAG	8	Unmodified	_TNAKLAAG_					0	0	0			REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	373.2130920290947	2	373.213778	744.413003	1.7557	0.00065525	-2.9121	-0.0010868	-1.1564	-0.00043158	373.21238298655265	63.674	0.89894	64.003	63.631	64.529	0.32899					63	28	4	0	0	0	0.89051	1	26635	26635		2.3027	0.24298	1	11553000	+		34770	13956	17128	17204	40653	40653					0.030572711461331892
TNAKLAAG	8	Unmodified	_TNAKLAAG_					0	0	0			REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	REV__ENST00000569466.1_1_16:30365507-30365965:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	373.213778	744.413003	1.7557	0.00065525	-2.9121	-0.0010868	-1.1564	-0.00043158	373.21238298655265	63.674	0.89894	64.003	63.631	64.529	0.32899	-0.00048437	-0.00026837	NaN	2.3027	63	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11553000	+		34771	13956	17128	17204							0.030572711461331892
TNATKLVS	8	Unmodified	_TNATKLVS_					0	0	0		tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2393066287041	2	417.239993	832.465432	1.5014	0.00062642	-3.3608	-0.0014023	-1.8594	-0.00077583	417.2383602623401	70.284	1.4516	70.606	69.721	71.173	0.32224					71	46	3	0	0	0	0.89051	1	29360	29360		2.3027	0	1	17226000			34772	16247	17129	17205	40654	40654					0.042498094890902394
TNATTLLL	8	Unmodified	_TNATTLLL_					0	0	0		nc|ENSG00000175497|Q8N608-4|DPP10;nc|ENSG00000175497|Q8N608-2|DPP10;ENSG00000175497|ENST00000410059|DPP10;nc|ENSG00000175497|Q8N608-3|DPP10	nc|ENSG00000175497|Q8N608-4|DPP10	nc|ENSG00000175497|Q8N608-4|DPP10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	846.4951660037041	1	846.49311	845.485833	1.5967	0.0013516	-0.85911	-0.00072723	0.73758	0.00062435	846.4929022698101	48.991	0.39977	50.969	50.761	51.161	1.9772					23	12	3	0	0	0	0.55531	1	20555	20555		43.858	1.7637	1	1658000			34773	4376	17130	17206	40655	40655					0.056909801489041456
TNDKNVILV	9	Unmodified	_TNDKNVILV_					0	0	0			REV__tr|A0A7D6ZI13|A0A7D6ZI13_9CLOTAminoacidABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02315PE=3SV=1	REV__tr|A0A7D6ZI13|A0A7D6ZI13_9CLOTAminoacidABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02315PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	508.2938415408134	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.485	1	43.809	43.309	44.309	0.32389								0	0	0	0.40883	1	18257	18257		7.9102	1.187	1		+		34774	15657	17131	17207	40656	40656					0.06425725614724342
TNGIAKAA	8	Unmodified	_TNGIAKAA_					0	0	0			REV__ENSG00000039123|ENST00000230640|MTREX	REV__ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	373.2128173708916	2	373.213778	744.413003	1.7557	0.00065525	-2.9121	-0.0010868	-1.1564	-0.00043158	373.21238298655265	63.674	0.89894	64.003	63.631	64.529	0.32899					63	28	4	0	0	0	0.89176	1	26685	26685		0.79363	0	1	11553000	+		34775	8590	17132	17208	40657	40657					0.030572711461331892
TNIKKLFLV	9	Unmodified	_TNIKKLFLV_					0	0	0			REV__ENST00000463426.5_1_13:113864225-113883965:+|nuORF	REV__ENST00000463426.5_1_13:113864225-113883965:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.2331420779228	3	359.233982	1074.68012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.237	1	49.567	49.067	50.067	0.33019								0	0	0	0.42693	1	20638	20638		0.96228	0	1		+		34776	10111	17133	17209	40658	40658					0.14576356304837645
TNLTSILGV	9	Unmodified	_TNLTSILGV_					0	0	0			REV__tr|A0A553SH25|A0A553SH25_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_12015PE=3SV=1	REV__tr|A0A553SH25|A0A553SH25_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_12015PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	459.2700988650322	2	459.26875	916.522947	2.8463	0.0013072	-0.19195	-8.8158E-05	2.6544	0.0012191	459.2686343388159	60.133	0.57272	61.553	61.298	61.871	1.4196					53	18	4	0	0	0	0.070055	1	25272	25272		60.074	10.141	1	42802000	+		34777	14774	17134	17210	40659	40659					0.06134651694674176
TNLTSILGV	9	Unmodified	_TNLTSILGV_					0	0	0			REV__tr|A0A553SH25|A0A553SH25_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_12015PE=3SV=1	REV__tr|A0A553SH25|A0A553SH25_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_12015PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	459.2699157595634	2	459.26875	916.522947	3.1232	0.0014344	-0.5803	-0.00026651	2.5429	0.0011679	459.2684500019424	59.669	0.51134	61.638	61.376	61.887	1.969					48	16	4	0	0	0	0.057024	1	25037	25037		65.235	9.058	1	40326000	+		34778	14774	17134	17210	40660	40660					0.06134651694674176
TNPIIIPILL	10	Unmodified	_TNPIIIPILL_					0	0	0		tr|A0A553SKM3|A0A553SKM3_NIACINodulationproteinNfeDOS=NialliacirculansOX=1397GN=CEQ21_18990PE=4SV=1	tr|A0A553SKM3|A0A553SKM3_NIACINodulationproteinNfeDOS=NialliacirculansOX=1397GN=CEQ21_18990PE=4SV=1	tr|A0A553SKM3|A0A553SKM3_NIACINodulationproteinNfeDOS=NialliacirculansOX=1397GN=CEQ21_18990PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	369.1231262087822	3	369.577637	1105.71108	-0.39754	-0.00014692	2.5968	0.00095973	2.1993	0.0008128	369.57853717690267	50.303	0.86108	50.303	50.146	51.007	0					38	27	2	0	0	0	0.12561	1	21144	21144		0.15932	0	1	930070			34779	16295	17135	17211	40661	40661					0.1624550961910245
TNQPKKHL	8	Unmodified	_TNQPKKHL_					0	0	0		chr3:54634565-54637674|291|36.16|0.21|7.42|-|0|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|2	chr3:54634565-54637674|291|36.16|0.21|7.42|-|0|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|2	chr3:54634565-54637674|291|36.16|0.21|7.42|-|0|TE_info:HERVH-int,HERVH-int_dup1090,ERV1,LTR,donor,-,54637674,54639750|ESRG,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2790099978447	2	483.279983	964.545414	2.5868	0.0012502	-3.1917	-0.0015425	-0.60489	-0.00029233	483.2784402268643	77.933	0.45296	79.213	78.982	79.435	1.2809					35	14	3	0	0	0	0.87935	1	32728	32728		9.3474	4.1168	1	5020200			34780	262	17136	17212	40662	40662					0.06172295882936396
TNSTKALAI	9	Unmodified	_TNSTKALAI_					0	0	0			REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	918.5251953005791	1	918.525473	917.518196	1.1324	0.0010402	-0.77547	-0.00071229	0.35696	0.00032788	918.5246734475197	103.46	0.056366	103.46	103.43	103.48	0					8	2	4	0	0	0	0.83753	1	43439	43439		1.8442	0	1	15672000	+		34781	14294	17137	17213	40663	40663					0.0561376755188121
TNSTKALAI	9	Unmodified	_TNSTKALAI_					0	0	0			REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	918.525473	917.518196	1.1324	0.0010402	-0.77547	-0.00071229	0.35696	0.00032788	918.5246734475197	103.46	0.056366	103.46	103.43	103.48	0	-0.024348	7.5768E-05	NaN	1.8442	8	2	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15672000	+		34782	14294	17137	17213							0.0561376755188121
TNSTKALAI	9	Unmodified	_TNSTKALAI_					0	0	0			REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	REV__L1PA11_dup580|chr2:214963946-214966413:+|1.0797114683140654|0.244988541359441|2.14|429.0|161|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	918.525473	917.518196	2.8089	0.00258	-1.3495	-0.0012396	1.4593	0.0013404	918.5241296655298	103.45	0.063293	103.51	103.46	103.52	0.059502	0.024348	-0.00045152	NaN	1.8442	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	40532000	+		34783	14294	17137	17213							0.0561376755188121
TNTKAAKS	8	Unmodified	_TNTKAAKS_					0	0	0			REV__tr|A0A7D6ZXN1|A0A7D6ZXN1_9CLOTHPrfamilyphosphocarrierproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08300PE=4SV=1	REV__tr|A0A7D6ZXN1|A0A7D6ZXN1_9CLOTHPrfamilyphosphocarrierproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.7299072146416	2	410.729792	819.445031	0.39003	0.0001602	-0.028176	-1.1573E-05	0.36186	0.00014862	410.729310466655	68.604	0.34621	68.604	68.453	68.799	0					16	10	2	0	0	0	0.89176	1	28587	28587		0.79363	0	1	623990	+		34784	15763	17138	17214	40664	40664					0.02808638829276333
TNTKKITK	8	Unmodified	_TNTKKITK_					0	0	0		tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2921630740166	2	467.290017	932.565481	3.3474	0.0015642	-0.74372	-0.00034753	2.6037	0.0012167	467.28947911428736	107.71	0.18046	107.87	107.75	107.93	0.15781					31	9	4	0	0	0	0.89176	1	46371	46371		0.79363	0	1	449740000			34785	16787	17139	17215	40665	40665					0.09650046822889635
TNTKKITK	8	Unmodified	_TNTKKITK_					0	0	0		tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	tr|A0A7D6VQ97|A0A7D6VQ97_9CLOTATPsynthasegammachainOS=ClostridiumintestinaleOX=36845GN=atpGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2917053103447	2	467.290017	932.565481	3.5632	0.0016651	-1.7471	-0.00081642	1.8161	0.00084865	467.2890738364612	107.68	0.20221	107.84	107.74	107.94	0.15795					27	10	4	0	0	0	0.89176	1	46305	46305		0.79363	0	1	512390000			34786	16787	17139	17215	40666	40666					0.09650046822889635
TNTKTVLT	8	Unmodified	_TNTKTVLT_					0	0	0		tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	tr|A0A553SQ76|A0A553SQ76_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_20455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2539550662041	2	439.2531	876.491647	2.8428	0.0012487	-1.1022	-0.00048412	1.7406	0.00076457	439.25201476063216	72.378	0.45927	73.708	73.423	73.883	1.3298					36	14	3	0	0	0	0.89176	1	30322	30322		0.79363	0	1	5635700			34787	16504	17140	17216	40667	40667					0.04846078660557396
TNVPLDERIEK	11	Unmodified	_TNVPLDERIEK_					0	0	0			REV__ENSG00000147649|ENST00000336273|MTDH	REV__ENSG00000147649|ENST00000336273|MTDH	MSMS	GG20161007_CRH_Patient100_W632_02	4	657.3571044802666	2	657.356616	1312.69868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.787	1	18.09	17.59	18.59	1.3023								0	0	0	0.63774	1	6972	6972		7.1017	0	1		+		34788	10329	17141	17217	40668	40668					0.054838214181017975
TNVWLKQEWS	10	Unmodified	_TNVWLKQEWS_					0	0	0		nc|ENSG00000120903|Q15822-2|CHRNA2;ENSG00000120903|ENST00000407991|CHRNA2	nc|ENSG00000120903|Q15822-2|CHRNA2	nc|ENSG00000120903|Q15822-2|CHRNA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8891174197197	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.93	1	119.09	118.59	119.59	0.16237								0	0	0	0.66254	1	51330	51330		0.15932	0	1				34789	2122	17142	17218	40669	40669					0.007201845634881465
TPADVDLIR	9	Unmodified	_TPADVDLIR_					0	0	0			REV__tr|A0A7D6ZGI3|A0A7D6ZGI3_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22430PE=3SV=1	REV__tr|A0A7D6ZGI3|A0A7D6ZGI3_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22430PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.7479736208916	2	500.277106	998.53966	1.8399	0.00092048	4.36	0.0021812	6.1999	0.0031017	500.27921938358907	48.462	0.30945	50.439	50.297	50.607	1.9772					12	9	2	0	0	0	0.11027	1	20318	20318		12.241	0	1	557260	+		34790	15640	17143	17219	40670	40670					0.040331525806209356
TPADVFIVF	9	Unmodified	_TPADVFIVF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;nc|ENSG00000116747|P10155-5|RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1008.544421374798	1	1008.54006	1007.53278	4.3202	0.0043571	0.86825	0.00087567	5.1884	0.0052328	1008.5405354335345	87.28	0.31079	88.371	88.21	88.521	1.0918					24	9	3	0	0	0	0.031324	2	36818	36768;36818		85.357	40.95	1	4187200			34791	1985	17144	17220	40671;40672	40672					0.029318397000452023
TPADVFIVF	9	Unmodified	_TPADVFIVF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;nc|ENSG00000116747|P10155-5|RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7748596072197	2	504.773668	1007.53278	4.5887	0.0023163	0.46503	0.00023474	5.0538	0.002551	504.77402890419233	87.321	0.4342	88.413	88.148	88.583	1.0918					35	13	3	0	0	0	0.076627	3	36786	36786;36832;36888		57.471	32.797	1	7013500			34792	1985	17144	17220	40673;40674;40675	40673					0.029318397000452023
TPADVFIVF	9	Unmodified	_TPADVFIVF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;nc|ENSG00000116747|P10155-5|RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.545703113079	1	1008.54006	1007.53278	4.7091	0.0047493	-0.19657	-0.00019825	4.5125	0.0045511	1008.5394111907123	86.874	0.36749	88.37	88.151	88.518	1.4953					27	11	3	0	0	0	0.031324	3	36574	36574;36622;36675		85.357	40.95	1	4932400			34793	1985	17144	17220	40676;40677;40678	40676					0.029318397000452023
TPADVFIVF	9	Unmodified	_TPADVFIVF_					0	0	0		nc|ENSG00000116747|P10155-3|RO60;nc|ENSG00000116747|P10155-5|RO60;nc|ENSG00000116747|P10155-4|RO60;ENSG00000116747|ENST00000400968|RO60	nc|ENSG00000116747|P10155-3|RO60	nc|ENSG00000116747|P10155-3|RO60	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7770568728447	2	504.773668	1007.53278	4.482	0.0022624	0.79556	0.00040158	5.2776	0.002664	504.77420056490087	86.852	0.39627	88.347	88.122	88.518	1.4953					31	12	3	0	0	0	0.076627	2	36621	36577;36621		57.471	25.354	1	5473000			34794	1985	17144	17220	40679;40680	40680					0.029318397000452023
TPAKNLGRR	9	Unmodified	_TPAKNLGRR_					0	0	0		nc|ENSG00000204209|Q9UER7-2|DAXX	nc|ENSG00000204209|Q9UER7-2|DAXX	nc|ENSG00000204209|Q9UER7-2|DAXX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.592028796673	1	1012.60104	1011.59376	1.6685	0.0016896	-3.5124	-0.0035567	-1.8439	-0.0018671	1012.5992833997105	71.445	0.48607	72.787	72.512	72.998	1.3415					25	15	2	0	0	0	0.35391	1	29975	29975		22.736	0	1	4751900			34795	7976	17145	17221	40681	40681					0.0884278952285058
TPALQSHIP	9	Unmodified	_TPALQSHIP_					0	0	0		ENST00000367069.6_1_6:159421007-159421208:-|nuORF	ENST00000367069.6_1_6:159421007-159421208:-|nuORF	ENST00000367069.6_1_6:159421007-159421208:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	482.2670165896416	2	482.266542	962.51853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.505	1	47.505	47.005	48.005	0								0	0	0	0.30487	1	19848	19848		18.135	4.6271	1				34796	6057	17146	17222	40682	40682					0.03577187271753246
TPDFQWDEKVH	11	Unmodified	_TPDFQWDEKVH_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	467.8874084353447	3	467.88597	1400.63608	1.4388	0.00067321	0.82853	0.00038766	2.2674	0.0010609	467.88674431195625	22.772	0.32896	23.005	22.86	23.189	0.23306					29	10	4	0	0	0	0.98765	1	9534	9534		2.084	0.75432	1	2858800			34797	3062	17147	17223	40683	40683					-0.04821324650106362
TPDFTDIVL	9	Unmodified	_TPDFTDIVL_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant;LRP6|p.C603Sfs*12|1|0.05|ENSG00000070018|chr12:12164504-12164517|AGGTCTATAGAGGC/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1020.528613269329	1	1020.5248	1019.51753	1.848	0.0018859	0.74849	0.00076385	2.5965	0.0026498	1020.5256027190675	75.952	0.45032	77.246	77.038	77.488	1.2938					33	14	3	0	0	0	0.031324	2	31866	31866;31916		85.357	27.885	1	5735400			34798	846	17148	17224	40684;40685	40684					0.008549281121986496
TPDFTDIVL	9	Unmodified	_TPDFTDIVL_					0	0	0		ENSG00000070018|ENST00000261349|LRP6;LRP6|p.E1501Nfs*47|1|0.14|ENSG00000070018|chr12:12124611-12124611|C/-|frameshift_variant;LRP6|p.C603Sfs*12|1|0.05|ENSG00000070018|chr12:12164504-12164517|AGGTCTATAGAGGC/-|frameshift_variant	ENSG00000070018|ENST00000261349|LRP6	ENSG00000070018|ENST00000261349|LRP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1020.525866687298	1	1020.5248	1019.51753	2.7596	0.0028162	-1.3622	-0.0013902	1.3973	0.001426	1020.5231438718296	75.467	0.63371	77.248	76.978	77.611	1.7817					41	20	3	0	0	0	0.031324	3	31632	31632;31684;31742		85.357	34.502	1	6546300			34799	846	17148	17224	40686;40687;40688	40686					0.008549281121986496
TPDMQHELI	9	Unmodified	_TPDMQHELI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.2620117068291	2	542.260599	1082.50665	2.5483	0.0013818	-0.35268	-0.00019124	2.1956	0.0011906	542.2604639148655	78.09	1.004	79.371	78.95	79.953	1.2809					51	32	3	0	0	0	0.18809	1	32758	32758		34.402	10.381	1	2299200	+		34800	10294	17149	17225	40689	40689					-0.03130797533731311
TPDMQHELI	9	Unmodified	_TPDMQHELI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.2612182497978	2	542.260599	1082.50665	1.3742	0.00074516	-1.6349	-0.00088652	-0.26069	-0.00014136	542.2599333063087	77.646	0.89089	79.397	79.041	79.932	1.7514					45	28	2	0	0	0	0.25667	1	32585	32585		27.629	5.8822	1	2270100	+		34801	10294	17149	17225	40690	40690					-0.03130797533731311
TPDMQHELI	9	Unmodified	_TPDMQHELI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	542.260599	1082.50665	2.5483	0.0013818	-0.35268	-0.00019124	2.1956	0.0011906	542.2604639148655	78.09	1.004	79.371	78.95	79.953	1.2809	-0.013241	0.0006175	NaN	34.402	51	32	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2299200	+		34802	10294	17149	17225							-0.03130797533731311
TPDMQHELI	9	Unmodified	_TPDMQHELI_					0	0	0			REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	REV__nc|ENSG00000146090|Q8N431-2|RASGEF1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	542.260599	1082.50665	1.3742	0.00074516	-1.6349	-0.00088652	-0.26069	-0.00014136	542.2599333063087	77.646	0.89089	79.397	79.041	79.932	1.7514	0.013241	-0.00077305	NaN	34.402	45	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2270100	+		34803	10294	17149	17225							-0.03130797533731311
TPDVLHVWL	9	Unmodified	_TPDVLHVWL_					0	0	0		ENST00000376387.4_1_13:100206706-100207861:+|nuORF	ENST00000376387.4_1_13:100206706-100207861:+|nuORF	ENST00000376387.4_1_13:100206706-100207861:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.7987548708916	2	540.297842	1078.58113	3.348	0.0018089	2.1772	0.0011764	5.5252	0.0029852	540.2991951130447	93.437	0.12582	94.714	94.61	94.736	1.277					5	3	2	0	0	0	0.11463	1	39322	39322		12.532	0.89125	1	505170			34804	6189	17150	17226	40691	40691					0.04498333339938654
TPEVDDEALEK	11	Unmodified	_TPEVDDEALEK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	623.2973510622978	2	623.29589	1244.57723	1.2212	0.00076116	0.54026	0.00033674	1.7614	0.0010979	623.2963593350655	21.829	0.7439	21.829	21.625	22.369	0					70	23	5	0	0	0	0.0001958	4	9079	9031;9079;9117;9160		183.95	149.02	1	48633000		+	34805	339	17151	17227	40692;40693;40694;40695	40693					-0.03527845735106894
TPEVDDEALEK	11	Unmodified	_TPEVDDEALEK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	623.2966186404228	2	623.29589	1244.57723	0.57061	0.00035566	0.45206	0.00028177	1.0227	0.00063743	623.2961092076276	21.602	0.45325	21.825	21.631	22.084	0.223					43	14	4	0	0	0	0.0001958	2	8999	8950;8999		183.95	139.97	1	9630100		+	34806	339	17151	17227	40696;40697	40697					-0.03527845735106894
TPEVDDEALEK	11	Unmodified	_TPEVDDEALEK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	623.2973510622978	2	623.29589	1244.57723	0.63117	0.0003934	0.53744	0.00033498	1.1686	0.00072839	623.2963596695369	20.756	0.30173	21.881	21.712	22.013	1.1254					28	9	4	0	0	0	0.0036499	2	8631	8631;8681		132.57	93.952	1	6080200		+	34807	339	17151	17227	40698;40699	40698					-0.03527845735106894
TPEVDDEALEK	11	Unmodified	_TPEVDDEALEK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.2968627810478	2	623.29589	1244.57723	-0.075153	-4.6842E-05	0.82664	0.00051524	0.75148	0.0004684	623.2967908645882	20.302	0.38917	21.877	21.7	22.089	1.5748					37	12	4	0	0	0	0.0046537	2	8422	8422;8473		135.87	92.102	1	3971100		+	34808	339	17151	17227	40700;40701	40700					-0.03527845735106894
TPFNAAQNKA	10	Unmodified	_TPFNAAQNKA_					0	0	0		nc|ENSG00000152672|Q8N1N0-2|CLEC4F;ENSG00000152672|ENST00000272367|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	nc|ENSG00000152672|Q8N1N0-2|CLEC4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2743408083916	2	531.272355	1060.53016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.75	1	104.91	104.41	105.41	0.16055								0	0	0	0.66185	1	44459	44459		1.3295	0.5359	1				34809	3333	17152	17228	40702	40702					0.0023138429510254355
TPGDNCSCCC	10	Unmodified	_TPGDNCSCCC_					0	0	0			REV__ENST00000582352.1_1_17:18236273-18236588:-|nuORF	REV__ENST00000582352.1_1_17:18236273-18236588:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.7639343142509	3	334.764312	1001.27111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.053	1	12.841	12.341	13.341	0.78751								0	0	0	0.66254	1	5004	5004		0.15932	0	1		+		34810	14004	17153	17229	40703	40703					-0.22947717316674243
TPGEKMKILH	10	Unmodified	_TPGEKMKILH_					0	0	0		nc|ENSG00000198604|Q9NRL2-2|BAZ1A;ENSG00000198604|ENST00000360310|BAZ1A	nc|ENSG00000198604|Q9NRL2-2|BAZ1A	nc|ENSG00000198604|Q9NRL2-2|BAZ1A	MSMS	GG20161007_CRH_Patient100_A02_02	2	385.1544067263603	3	385.218115	1152.63251	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.16	1	103.22	102.72	103.72	0.059502								0	0	0	0.66166	1	43236	43236		0.69767	0.24315	1				34811	5059	17154	17230	40704	40704					0.06230334042356844
TPGNFFHVL	9	Unmodified	_TPGNFFHVL_					0	0	0		nc|ENSG00000105953|Q02218-2|OGDH;ENSG00000105953|ENST00000222673|OGDH	nc|ENSG00000105953|Q02218-2|OGDH	nc|ENSG00000105953|Q02218-2|OGDH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2698242068291	2	516.269084	1030.52362	0.77055	0.00039781	-0.43177	-0.00022291	0.33877	0.0001749	516.269847767656	57.417	0.2333	58.832	58.696	58.929	1.4145					14	8	2	0	0	0	0.037761	1	24067	24067		78.149	45.844	1	4118100			34812	1549	17155	17231	40705	40705					0.009574911343861459
TPHECAVH	8	Unmodified	_TPHECAVH_					0	0	0			REV__nc|ENSG00000104133|Q96JI7-2|SPG11	REV__nc|ENSG00000104133|Q96JI7-2|SPG11	MSMS	GG20161007_CRH_Patient100_W632_01	3	447.2008849978447	2	447.200344	892.386136	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.85	1	104.01	103.51	104.51	0.16055								0	0	0	1.0178	1	43880	43880		0.79363	0	1		+		34813	9126	17156	17232	40706	40706					-0.06436160736700458
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2117187380791	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.086	1	58.409	57.909	58.909	0.32298								0	0	0	1.0178	1	24349	24349		1.6526	1.1943	1				34814	4580	17157	17233	40707	40707					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2096435427666	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.825	1	63.155	62.655	63.655	0.32974								0	0	0	1.0178	1	26322	26322		1.6526	1.1943	1				34815	4580	17157	17233	40708	40708					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2096130251884	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.949	1	63.279	62.779	63.779	0.32974								0	0	0	1.0178	1	26373	26373		1.6526	1.1943	1				34816	4580	17157	17233	40709	40709					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2096130251884	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.04	1	63.37	62.87	63.87	0.32974								0	0	0	1.0178	1	26411	26411		1.6526	1.1943	1				34817	4580	17157	17233	40710	40710					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2098876833916	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.225	1	63.555	63.055	64.055	0.32974								0	0	0	1.0178	1	26489	26489		1.6526	1.1943	1				34818	4580	17157	17233	40711	40711					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2086669802666	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.621	1	63.95	63.45	64.45	0.32899								0	0	0	1.0178	1	26654	26654		1.6526	1.1943	1				34819	4580	17157	17233	40712	40712					0.11300281390833788
TPILHVRR	8	Unmodified	_TPILHVRR_					0	0	0		FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant;ENSG00000181544|ENST00000650831|FANCB	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	FANCB|p.K829Sfs*12|1|0.15|ENSG00000181544|chrX:14843663-14843664|-/GAGAGGGAGATAAAATGGCCCTAGTTGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2094909548759	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.752	1	64.081	63.581	64.581	0.32899								0	0	0	1.0178	1	26713	26713		1.6526	1.1943	1				34820	4580	17157	17233	40713	40713					0.11300281390833788
TPKGVKLNKNV	11	Unmodified	_TPKGVKLNKNV_					0	0	0		ENSG00000254656|ENST00000649591|RTL1	ENSG00000254656|ENST00000649591|RTL1	ENSG00000254656|ENST00000649591|RTL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3690673708916	2	599.36933	1196.72411	3.1979	0.0019168	-4.3579	-0.002612	-1.16	-0.00069525	599.3667641257865	105.96	0.10212	106.12	106.06	106.16	0.15859					10	4	3	0	0	0	0.98155	1	45259	45259		4.897	0	1	21182000			34821	5395	17158	17234	40714	40714					0.13361340731171367
TPKIKKRGDK	10	Unmodified	_TPKIKKRGDK_					0	0	0			REV__nc|ENSG00000064933|P54277-3|PMS1	REV__nc|ENSG00000064933|P54277-3|PMS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.8710204958916	2	585.869497	1169.72444	1.3282	0.00077815	2.0771	0.0012169	3.4053	0.0019951	585.8704234268524	107.52	0.17311	107.52	107.41	107.58	0					21	8	4	0	0	0	0.88579	1	46099	46099		2.9952	0	1	39398000	+		34822	8668	17159	17235	40715	40715					0.1463676045102602
TPKIKKRGDK	10	Unmodified	_TPKIKKRGDK_					0	0	0			REV__nc|ENSG00000064933|P54277-3|PMS1	REV__nc|ENSG00000064933|P54277-3|PMS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.8710815310478	2	585.869497	1169.72444	3.1394	0.0018393	-0.94737	-0.00055504	2.192	0.0012842	585.8695309114312	105.98	0.13902	106.13	106.06	106.2	0.15859					16	6	3	0	0	0	0.89803	1	45280	45280		1.4819	0	1	42549000	+		34823	8668	17159	17235	40716	40716					0.1463676045102602
TPKIKKRGDK	10	Unmodified	_TPKIKKRGDK_					0	0	0			REV__nc|ENSG00000064933|P54277-3|PMS1	REV__nc|ENSG00000064933|P54277-3|PMS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	585.869497	1169.72444	1.3241	0.00077576	1.3056	0.00076491	2.6297	0.0015407	585.8702266503913	106.05	0.10571	106.05	105.99	106.09	0	-0.055956	0.0021878	NaN	1.4819	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7088000	+		34824	8668	17159	17235							0.1463676045102602
TPKIKKRGDK	10	Unmodified	_TPKIKKRGDK_					0	0	0			REV__nc|ENSG00000064933|P54277-3|PMS1	REV__nc|ENSG00000064933|P54277-3|PMS1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	585.869497	1169.72444	3.1394	0.0018393	-0.94737	-0.00055504	2.192	0.0012842	585.8695309114312	105.98	0.13902	106.13	106.06	106.2	0.15859	0.031776	-0.00045209	NaN	1.4819	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42549000	+		34825	8668	17159	17235							0.1463676045102602
TPKITVGRRIQ	11	Unmodified	_TPKITVGRRIQ_					0	0	0			REV__ENSG00000180574|ENST00000538173|EIF2S3B	REV__ENSG00000180574|ENST00000538173|EIF2S3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	423.5985290408134	3	423.598094	1267.77245	0.93723	0.00039701	0.076208	3.2282E-05	1.0134	0.00042929	423.59812200535475	94.407	0.58418	94.407	94.087	94.671	0					63	17	5	0	0	0	1.0365	1	39431	39431		1.2148	0	1	35375000	+		34826	9796	17160	17236	40717	40717					0.14927834371087556
TPKKASSA	8	Unmodified	_TPKKASSA_					0	0	0		nc|ENSG00000155966|P51816-7|AFF2;nc|ENSG00000155966|P51816-2|AFF2;nc|ENSG00000155966|P51816-6|AFF2;nc|ENSG00000155966|P51816-3|AFF2;nc|ENSG00000155966|P51816-5|AFF2;ENSG00000155966|ENST00000370460|AFF2	nc|ENSG00000155966|P51816-7|AFF2	nc|ENSG00000155966|P51816-7|AFF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.2263671755791	2	395.226885	788.439217	1.5526	0.00061362	-2.0443	-0.00080795	-0.49169	-0.00019433	395.2259957037468	66.044	0.54657	67.443	67.152	67.699	1.3989					39	17	3	0	0	0	0.89051	1	27694	27694		2.3027	0	1	6401000			34827	3434	17161	17237	40718	40718					0.03653540317611714
TPKKFFIL	8	Unmodified	_TPKKFFIL_					0	0	0			REV__L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|133|3|anti-sense	REV__L1PREC2_dup1338|chr3:98831351-98834041:-|1.380298648680358|0.2119742938869221|2.7|429.0|133|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.3126098513603	2	497.310221	992.605889	2.9906	0.0014873	-0.89411	-0.00044465	2.0965	0.0010426	497.309867465038	75.888	1.1427	76.21	75.519	76.662	0.32163					94	36	4	0	0	0	0.89051	1	31628	31628		2.3027	0	1	6966500	+		34828	14348	17162	17238	40719	40719					0.1092901321331965
TPKKNKHKR	9	Unmodified	_TPKKNKHKR_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8557617068291	2	568.854181	1135.69381	2.489	0.0014159	0.70269	0.00039973	3.1917	0.0018156	568.8546024402528	88.257	0.81925	88.492	88.195	89.015	0.2347					82	25	5	0	0	0	0.82654	3	37098	36981;37059;37098		3.9444	2.1002	1	111350000			34829	3058	17163	17239	40720;40721;40722	40722					0.13139026856629243
TPKKNKHKR	9	Unmodified	_TPKKNKHKR_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8567993044853	2	568.854181	1135.69381	4.6857	0.0026655	1.1405	0.0006488	5.8263	0.0033143	568.8547168948203	87.504	0.62306	88.596	88.335	88.958	1.0918					61	19	4	0	0	0	0.847	1	36895	36895		1.8442	0	1	43362000			34830	3058	17163	17239	40723	40723					0.13139026856629243
TPKKNKHKR	9	Unmodified	_TPKKNKHKR_					0	0	0		ENST00000478196.6_1_2:55459960-55462152:+|nuORF;ENSG00000143947|ENST00000272317|RPS27A	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	ENST00000478196.6_1_2:55459960-55462152:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8571655154228	2	568.854181	1135.69381	4.6946	0.0026706	-0.7134	-0.00040582	3.9812	0.0022647	568.8538459801454	87.253	0.55766	88.748	88.425	88.983	1.4953					59	17	5	0	0	0	0.82654	3	36839	36763;36800;36839		3.9444	2.1002	1	45581000			34831	3058	17163	17239	40724;40725;40726	40726					0.13139026856629243
TPKKTTTT	8	Unmodified	_TPKKTTTT_					0	0	0			REV__sp|Q6SWB9|UL11P_HCMVMProteinUL11OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL11PE=1SV=1	REV__sp|Q6SWB9|UL11P_HCMVMProteinUL11OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL11PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.2521240115166	2	439.2531	876.491647	1.3543	0.00059488	-2.8341	-0.0012449	-1.4798	-0.00064999	439.25151564437147	73.476	0.51829	73.476	73.216	73.734	0					41	16	3	0	0	0	0.8873	1	30558	30558		4.3292	2.0265	1	15482000	+		34832	14652	17164	17240	40727	40727					0.04846078660557396
TPKLELSEQDT	11	Unmodified	_TPKLELSEQDT_					0	0	0			REV__ENST00000461312.5_1_1:35901085-35909819:-|nuORF	REV__ENST00000461312.5_1_1:35901085-35909819:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	420.2764465212822	3	420.882114	1259.62451	4.068	0.0017121	2.5678	0.0010807	6.6357	0.0027929	421.2177300408178	91.666	0.39574	92.602	92.434	92.83	0.93623					21	12	2	0	0	0	0.14606	1	38580	38580		1.1098	0.48293	1	1141700	+		34833	10188	17165	17241	40728	40728					0.005084335358787939
TPKLLHKALMS	11	Unmodified	_TPKLLHKALMS_					0	0	0		tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	tr|A0A7D6VP23|A0A7D6VP23_9CLOT2-hydroxyacyl-CoAdehydrataseOS=ClostridiumintestinaleOX=36845GN=HZF06_14975PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8703491091728	2	619.868108	1237.72166	2.1274	0.0013187	1.7958	0.0011131	3.9232	0.0024319	619.8690044162826	77.134	1.4328	77.134	76.316	77.749	0					112	45	3	0	0	0	1.0366	1	32039	32039		1.1933	0	1	3039400			34834	16753	17166	17242	40729	40729					0.11231169001871422
TPKLRSTRLR	10	Unmodified	_TPKLRSTRLR_					0	0	0		nc|ENSG00000080603|Q6ZRS2-2|SRCAP;ENSG00000080603|ENST00000262518|SRCAP;nc|ENSG00000080603|Q6ZRS2-3|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	nc|ENSG00000080603|Q6ZRS2-2|SRCAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	614.3868286013603	2	614.385845	1226.75714	2.8416	0.0017458	2.519	0.0015476	5.3606	0.0032935	614.3885646266015	85.348	0.56726	85.348	85.036	85.603	0					36	17	3	0	0	0	0.89803	1	35490	35490		1.4819	0	1	1408200			34835	1005	17167	17243	40730	40730					0.15282967573875794
TPKMCLLEW	9	Unmodified	_TPKMCLLEW_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7852661013603	2	560.780113	1119.54567	3.3341	0.0018697	4.4664	0.0025047	7.8006	0.0043744	560.7819969157396	74.482	0.41782	75.8	75.621	76.039	1.318					29	13	3	0	0	0	0.46905	1	31263	31263		16.942	3.0362	1	2507300			34836	3960	17168	17244	40731	40731					-0.009317885037262386
TPKMCLLEW	9	Unmodified	_TPKMCLLEW_					0	0	0		ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	ENSG00000167264|ENST00000565263|DUS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.7822753787041	2	560.780113	1119.54567	3.0022	0.0016836	1.8862	0.0010577	4.8884	0.0027413	560.7825517762066	74.015	0.39226	75.811	75.597	75.989	1.7962					17	12	2	0	0	0	0.32838	1	31052	31052		24.021	1.2843	1	1747600			34837	3960	17168	17244	40732	40732					-0.009317885037262386
TPKQLIVL	8	Unmodified	_TPKQLIVL_					0	0	0			REV__ENSG00000171914|ENST00000636159|TLN2	REV__ENSG00000171914|ENST00000636159|TLN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	456.3009521365166	2	456.299853	910.585153	3.3518	0.0015294	-0.71104	-0.00032445	2.6408	0.001205	456.2994102958088	106.15	0.2431	106.2	106.1	106.35	0.05455					35	11	5	0	0	0	0.89051	1	45154	45154		2.3027	0	1	136680000	+		34838	11049	17169	17245	40733	40733					0.1262842283365444
TPKQQELRKKA	11	Unmodified	_TPKQQELRKKA_					0	0	0			REV__nc|ENSG00000171634|Q12830-4|BPTF	REV__nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8971435427666	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0366	1	34937	34937		1.1933	0	1	6935600	+		34839	11037	17170	17246	40734	40734					0.12807513162874784
TPKQRLLGWI	10	Unmodified	_TPKQRLLGWI_					0	0	0		FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNB|p.T1593Ifs*40|1|0.08|ENSG00000136068|chr3:58136084-58136085|-/TCTATCAAGTC|frameshift_variant;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-4|FLNB;FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant;FLNB|p.S2513Rfs*5|1|0.04|ENSG00000136068|chr3:58169710-58169711|-/GATTC|frameshift_variant;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC;FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant;FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3679077029228	2	606.36659	1210.71863	2.1933	0.0013299	3.1672	0.0019205	5.3605	0.0032504	606.3676705113386	74.993	1.614	74.993	74.014	75.628	0					92	50	3	0	0	0	0.89803	1	31082	31082		1.4819	1.0236	1	2132600			34840	2705;2374;4968	17171	17247	40735	40735					0.12169661939356047
TPKQRLLGWI	10	Unmodified	_TPKQRLLGWI_					0	0	0		FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNB|p.T1593Ifs*40|1|0.08|ENSG00000136068|chr3:58136084-58136085|-/TCTATCAAGTC|frameshift_variant;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-4|FLNB;FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant;FLNB|p.S2513Rfs*5|1|0.04|ENSG00000136068|chr3:58169710-58169711|-/GATTC|frameshift_variant;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC;FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant;nc|ENSG00000196924|P21333-2|FLNA;ENSG00000196924|ENST00000369850|FLNA	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant;FLNA|p.H2029Qfs*32|1|0.9|ENSG00000196924|chrX:154353130-154353140|TGCTGGCCACG/-|frameshift_variant	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3694946169853	2	606.36659	1210.71863	2.4745	0.0015004	3.3052	0.0020042	5.7797	0.0035046	606.368031336412	74.732	1.5436	75.056	74.138	75.681	0.32464					95	48	2	0	0	0	0.89803	2	31154	31154;31441		1.4819	1.0236	1	3106300			34841	2705;2374;4968	17171	17247	40736;40737	40736					0.12169661939356047
TPKRKKMRRR	10	Unmodified	_TPKRKKMRRR_					0	0	0		ENST00000300811.7_1_19:44112133-44118443:-|nuORF	ENST00000300811.7_1_19:44112133-44118443:-|nuORF	ENST00000300811.7_1_19:44112133-44118443:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	678.9196655154228	2	678.927689	1355.84082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.265	1	96.667	96.167	97.167	0.40208								0	0	0	0.66185	1	40496	40496		1.3295	0.13619	1				34842	5756	17172	17248	40738	40738					0.1771380046991453
TPKRLLRNIN	10	Unmodified	_TPKRLLRNIN_					0	0	0		tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.9223510622978	3	408.922689	1223.74624	0.74148	0.00030321	-0.84311	-0.00034477	-0.10163	-4.1557E-05	408.9223501836721	92.462	0.54696	92.462	92.197	92.744	0					61	17	5	0	0	0	0.89803	1	38651	38651		0.62683	0	1	35869000			34843	16852	17173	17249	40739	40739					0.1433156519960903
TPKRLLRNIN	10	Unmodified	_TPKRLLRNIN_					0	0	0		tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	tr|A0A7D6VS11|A0A7D6VS11_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_21080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8806640505791	2	612.880396	1223.74624	3.2992	0.002022	-2.5619	-0.0015702	0.73726	0.00045185	612.8786866925168	91.352	0.52451	92.718	92.438	92.963	1.366					53	16	4	0	0	0	0.89803	1	38477	38477		1.4819	0	1	15937000			34844	16852	17173	17249	40740	40740					0.1433156519960903
TPKRRRLWR	9	Unmodified	_TPKRRRLWR_					0	0	0		ENST00000356840.7_1_6:16129383-16129569:+|nuORF	ENST00000356840.7_1_6:16129383-16129569:+|nuORF	ENST00000356840.7_1_6:16129383-16129569:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.8942748904228	2	634.894172	1267.77379	2.8146	0.001787	-1.1494	-0.00072974	1.6652	0.0010572	634.8930575622944	93.254	0.47488	94.531	94.292	94.767	1.277					47	14	4	0	0	0	0.847	1	39286	39286		1.8442	0.36234	1	11304000			34845	5993	17174	17250	40741	40741					0.150615132504754
TPKSARAR	8	Unmodified	_TPKSARAR_					0	0	0			REV__ENST00000569095.1_1_16:65002436-65005938:-|nuORF	REV__ENST00000569095.1_1_16:65002436-65005938:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.7659789919853	2	443.764501	885.514448	2.8877	0.0012815	-0.37127	-0.00016475	2.5164	0.0011167	443.76426510790776	73.542	0.68103	75.338	75.006	75.687	1.7962					47	21	3	0	0	0	0.89051	1	30810	30810		2.3027	0	1	7102400	+		34846	13952	17175	17251	40742	40742					0.0671114256869032
TPKSARAR	8	Unmodified	_TPKSARAR_					0	0	0			REV__ENST00000569095.1_1_16:65002436-65005938:-|nuORF	REV__ENST00000569095.1_1_16:65002436-65005938:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	443.764501	885.514448	1.5666	0.00069519	0.45721	0.00020289	2.0238	0.00089808	443.7646611514941	74.892	0.56421	74.892	74.621	75.185	0	-0.22161	0.00063556	NaN	2.3027	50	17	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17276000	+		34847	13952	17175	17251							0.0671114256869032
TPKVHPRGKN	10	Unmodified	_TPKVHPRGKN_					0	0	0			REV__ENST00000589854.1_1_19:5790042-5791152:-|nuORF	REV__ENST00000589854.1_1_19:5790042-5791152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3306762576103	2	567.330539	1132.64652	1.5387	0.00087294	-0.55886	-0.00031706	0.97982	0.00055588	567.3299276719357	75.035	2.1529	75.035	73.952	76.105	0					218	67	5	0	0	0	0.89803	2	31026	31026;31273		1.1933	1.1933	1	6327800	+		34848	10169	17176	17252	40743;40744	40743					0.0855074758567298
TPKVHPRGKN	10	Unmodified	_TPKVHPRGKN_					0	0	0			REV__ENST00000589854.1_1_19:5790042-5791152:-|nuORF	REV__ENST00000589854.1_1_19:5790042-5791152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3313476443291	2	567.330539	1132.64652	2.4475	0.0013885	-0.92071	-0.00052235	1.5268	0.00086619	567.3297076976346	74.695	2.0427	75.02	74.233	76.275	0.32463					203	64	5	0	0	0	0.89803	1	31097	31097		1.1933	1.1933	1	6803800	+		34849	10169	17176	17252	40745	40745					0.0855074758567298
TPKVKATA	8	Unmodified	_TPKVKATA_					0	0	0			REV__ENSG00000167971|ENST00000343516|CASKIN1	REV__ENSG00000167971|ENST00000343516|CASKIN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.2520019412041	2	408.252903	814.491253	0.32193	0.00013143	-2.437	-0.0009949	-2.115	-0.00086347	408.25175950512426	68.596	0.50312	68.596	68.359	68.862	0					39	15	3	0	0	0	0.8873	1	28568	28568		4.3292	0	1	8659000	+		34850	10887	17177	17253	40746	40746					0.07658703731374317
TPKVKKSPKFR	11	Unmodified	_TPKVKKSPKFR_					0	0	0		ENST00000570311.1_1_17:45126763-45127807:+|nuORF	ENST00000570311.1_1_17:45126763-45127807:+|nuORF	ENST00000570311.1_1_17:45126763-45127807:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	658.7468749880791	2	658.414072	1314.81359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.891	1	99.964	99.464	100.46	0.072716								0	0	0	0.63775	1	41826	41826		2.4985	1.169	1				34851	7390	17178	17254	40747	40747					0.16877595410528556
TPKVLAGN	8	Unmodified	_TPKVLAGN_					0	0	0			REV__ENSG00000131389|ENST00000622186|SLC6A6	REV__ENSG00000131389|ENST00000622186|SLC6A6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	400.2383911013603	2	400.237253	798.459953	2.846	0.0011391	-2.2888	-0.00091604	0.55725	0.00022303	400.23652206739814	107.73	0.16377	107.78	107.69	107.86	0.052444					21	8	3	0	0	0	0.89051	1	46147	46147		2.3027	0	1	42517000	+		34852	9819	17179	17255	40748	40748					0.0526613069727091
TPKVLAGN	8	Unmodified	_TPKVLAGN_					0	0	0			REV__ENSG00000131389|ENST00000622186|SLC6A6	REV__ENSG00000131389|ENST00000622186|SLC6A6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	400.237253	798.459953	2.846	0.0011391	-2.2888	-0.00091604	0.55725	0.00022303	400.23652206739814	107.73	0.16377	107.78	107.69	107.86	0.052444	-0.049381	-0.00055677	NaN	2.3027	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42517000	+		34853	9819	17179	17255							0.0526613069727091
TPKVLAGN	8	Unmodified	_TPKVLAGN_					0	0	0			REV__ENSG00000131389|ENST00000622186|SLC6A6	REV__ENSG00000131389|ENST00000622186|SLC6A6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	400.237253	798.459953	2.7086	0.0010841	-0.65749	-0.00026315	2.0511	0.00082092	400.23692453091076	107.71	0.18187	107.87	107.77	107.95	0.15781	0.042099	0.00074902	NaN	2.3027	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	704960000	+		34854	9819	17179	17255							0.0526613069727091
TPKVLAGN	8	Unmodified	_TPKVLAGN_					0	0	0			REV__ENSG00000131389|ENST00000622186|SLC6A6	REV__ENSG00000131389|ENST00000622186|SLC6A6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	400.237253	798.459953	3.1015	0.0012413	-1.9748	-0.00079039	1.1267	0.00045093	400.2364412569747	107.68	0.18375	107.84	107.74	107.92	0.15795	0.0072829	-0.00030546	NaN	2.3027	29	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	439140000	+		34855	9819	17179	17255							0.0526613069727091
TPKVLGSQ	8	Unmodified	_TPKVLGSQ_					0	0	0		ENST00000511482.1_1_5:306832-313953:+|nuORF	ENST00000511482.1_1_5:306832-313953:+|nuORF	ENST00000511482.1_1_5:306832-313953:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2410461306572	2	415.242535	828.470518	0.47144	0.00019576	-3.1546	-0.0013099	-2.6831	-0.0011141	415.24112892526693	70.132	0.40575	70.132	69.897	70.303	0					32	12	3	0	0	0	0.88846	1	29167	29167		3.5965	0	1	7687400			34856	7033	17180	17256	40749	40749					0.04942113351705757
TPKVRKKRQG	10	Unmodified	_TPKVRKKRQG_					0	0	0			REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3824951052666	2	599.380563	1196.74657	2.5993	0.001558	-2.1117	-0.0012657	0.48763	0.00029227	599.3792419137711	90.455	0.55378	90.455	90.193	90.746	0					64	17	5	0	0	0	0.88579	1	37892	37892		2.9952	1.151	1	37409000	+		34857	13924	17181	17257	40750	40750					0.15606984919440947
TPKVRKKRQG	10	Unmodified	_TPKVRKKRQG_					0	0	0			REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3812744021416	2	599.380563	1196.74657	2.5268	0.0015145	-1.8955	-0.0011361	0.6313	0.00037839	599.3793629300172	90.363	0.62398	90.572	90.242	90.866	0.20904					68	19	5	0	0	0	0.89803	1	37772	37772		1.4819	0	1	45564000	+		34858	13924	17181	17257	40751	40751					0.15606984919440947
TPKVRKKRQG	10	Unmodified	_TPKVRKKRQG_					0	0	0			REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	REV__ENST00000564629.1_1_16:31470269-31470434:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.9231750369072	3	399.922801	1196.74657	2.7255	0.00109	-2.0414	-0.0008164	0.68415	0.00027361	399.9219825953898	90.344	0.46468	90.553	90.275	90.74	0.20903					61	14	5	0	0	0	0.88579	1	37840	37840		1.4551	0	1	20735000	+		34859	13924	17181	17257	40752	40752					0.15606984919440947
TPLAMNRQ	8	Unmodified	_TPLAMNRQ_					0	0	0			REV__ENST00000537218.1_1_12:110338138-110342619:+|nuORF	REV__ENST00000537218.1_1_12:110338138-110342619:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.4843017458916	1	930.482562	929.475285	2.6328	0.0024497	-0.92535	-0.00086102	1.7074	0.0015887	930.4817895002279	87.019	0.89062	87.263	86.606	87.496	0.24387					98	35	3	0	0	0	0.89178	1	36377	36377		0.69038	0	1	52791000	+		34860	13757	17182	17258	40753	40753					0.007726742228214789
TPLDEKSLAL	10	Unmodified	_TPLDEKSLAL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;MORF4L2|p.Y241S|1|0.41|ENSG00000123562|chrX:103676306-103676306|T/G|missense_variant	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8068725466728	2	543.805697	1085.59684	2.2402	0.0012182	0.49345	0.00026834	2.7337	0.0014866	543.8059546313157	41.224	0.41024	42.55	42.336	42.746	1.3254					40	12	4	0	0	0	0.045001	2	17315	17264;17315		92.201	34.73	1	5162500			34861	2196	17183	17259	40754;40755	40755					0.05746575066314108
TPLDEKSLAL	10	Unmodified	_TPLDEKSLAL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;MORF4L2|p.Y241S|1|0.41|ENSG00000123562|chrX:103676306-103676306|T/G|missense_variant	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8062621951103	2	543.805697	1085.59684	2.0867	0.0011348	0.18316	9.9601E-05	2.2699	0.0012344	543.8057643897605	40.814	0.38044	42.707	42.515	42.896	1.8927					32	11	3	0	0	0	0.057517	2	17091	17091;17144		92.201	24.857	1	5498400			34862	2196	17183	17259	40756;40757	40756					0.05746575066314108
TPLDEKSLALL	11	Unmodified	_TPLDEKSLALL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.3464843630791	2	600.347729	1198.6809	0.48881	0.00029346	-0.46728	-0.00028053	0.02153	1.2925E-05	600.3473615104062	57.742	0.2452	59.16	59.045	59.29	1.4181					30	17	2	0	0	0	0.0030375	2	24229	24189;24229		128.87	39.966	1	9029000			34863	2196	17184	17260	40758;40759	40759					0.08951106163226541
TPLDEKSLALL	11	Unmodified	_TPLDEKSLALL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3475219607353	2	600.347729	1198.6809	0.62653	0.00037613	-0.26401	-0.0001585	0.36251	0.00021763	600.3475332791822	57.188	0.21426	59.157	59.067	59.281	1.9684					22	15	2	0	0	0	0.0022245	2	24013	23973;24013		150.18	61.273	1	7833300			34864	2196	17184	17260	40760;40761	40761					0.08951106163226541
TPLDTDWKR	9	Unmodified	_TPLDTDWKR_					0	0	0			REV__ENST00000479804.1_1_7:129815342-129818260:-|nuORF	REV__ENST00000479804.1_1_7:129815342-129818260:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	566.8414794802666	2	566.293288	1130.57202	2.6296	0.0014891	-2.4845	-0.001407	0.14506	8.2146E-05	566.2920822109822	76.704	0.43665	77.998	77.762	78.199	1.2938					22	13	2	0	0	0	0.11463	1	32134	32134		12.532	1.7076	1	646140	+		34865	10316	17185	17261	40762	40762					0.011959399836086959
TPLIHTELL	9	Unmodified	_TPLIHTELL_					0	0	0			REV__ENSG00000277481|ENST00000620267|PKD1L3	REV__ENSG00000277481|ENST00000620267|PKD1L3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1405517458916	2	518.8055	1035.59645	4.3424	0.0022528	4.382	0.0022734	8.7243	0.0045262	518.807839996531	92.292	0.29289	93.228	93.082	93.375	0.93623					14	8	2	0	0	0	0.11518	1	38899	38899		11.64	5.8799	1	467370	+		34866	12020	17186	17262	40763	40763					0.08007200137126347
TPLILLILPYF	11	Unmodified	_TPLILLILPYF_					0	0	0		nc|ENSG00000167904|Q96MH6-3|TMEM68;nc|ENSG00000167904|Q96MH6-2|TMEM68;ENSG00000167904|ENST00000434581|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	651.9097778201103	2	651.907225	1301.7999	3.2774	0.0021365	1.6277	0.0010611	4.905	0.0031976	651.9080129645484	107.32	0.19228	107.48	107.37	107.56	0.15795					28	9	4	0	0	0	1.0357	1	46074	46074		1.4819	0	1	110550000			34867	4001	17187	17263	40764	40764					0.16106924858763705
TPLILLILPYF	11	Unmodified	_TPLILLILPYF_					0	0	0		nc|ENSG00000167904|Q96MH6-3|TMEM68;nc|ENSG00000167904|Q96MH6-2|TMEM68;ENSG00000167904|ENST00000434581|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	651.907225	1301.7999	2.6676	0.001739	3.5876	0.0023388	6.2552	0.0040778	651.9098204003803	107.35	0.14922	107.41	107.31	107.46	0.052452	-0.050738	0.0014526	NaN	1.4819	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9871400			34868	4001	17187	17263							0.16106924858763705
TPLILLILPYF	11	Unmodified	_TPLILLILPYF_					0	0	0		nc|ENSG00000167904|Q96MH6-3|TMEM68;nc|ENSG00000167904|Q96MH6-2|TMEM68;ENSG00000167904|ENST00000434581|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	651.907225	1301.7999	2.8791	0.0018769	2.3951	0.0015614	5.2743	0.0034383	651.908720567941	107.33	0.16747	107.49	107.39	107.56	0.15781	0.030043	-0.00010211	NaN	1.4819	26	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	61615000			34869	4001	17187	17263							0.16106924858763705
TPLILLILPYF	11	Unmodified	_TPLILLILPYF_					0	0	0		nc|ENSG00000167904|Q96MH6-3|TMEM68;nc|ENSG00000167904|Q96MH6-2|TMEM68;ENSG00000167904|ENST00000434581|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	nc|ENSG00000167904|Q96MH6-3|TMEM68	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	651.907225	1301.7999	3.2774	0.0021365	1.6277	0.0010611	4.905	0.0031976	651.9080129645484	107.32	0.19228	107.48	107.37	107.56	0.15795	0.020695	-0.0011027	NaN	1.4819	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	110550000			34870	4001	17187	17263							0.16106924858763705
TPLINIVIQEV	11	Unmodified	_TPLINIVIQEV_					0	0	0		ENSG00000139517|ENST00000316334|LNX2	ENSG00000139517|ENST00000316334|LNX2	ENSG00000139517|ENST00000316334|LNX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8707763552666	2	619.871371	1237.72819	2.3481	0.0014556	-2.5532	-0.0015826	-0.20501	-0.00012708	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.9945	1	32832	32832		8.1555	0.54658	1	8928300			34871	2880	17188	17264	40765	40765					0.11883385434225602
TPLKRIFRKL	10	Unmodified	_TPLKRIFRKL_					0	0	0			REV__ENSG00000124143|ENST00000373345|ARHGAP40	REV__ENSG00000124143|ENST00000373345|ARHGAP40	MSMS	GG20161007_CRH_Patient100_A02_02	2	636.4191772341728	2	636.419157	1270.82376	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.213	1	69.536	69.036	70.036	0.32224								0	0	0	0.6624	1	28971	28971		0.40072	0.050084	1		+		34872	9633	17189	17265	40766	40766					0.19918203135785006
TPLPHPRPR	9	Unmodified	_TPLPHPRPR_					0	0	0			REV__ENST00000493381.1_1_3:49449841-49450177:+|nuORF	REV__ENST00000493381.1_1_3:49449841-49450177:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1645385622978	2	535.814525	1069.6145	2.1452	0.0011494	2.9288	0.0015693	5.074	0.0027187	535.8159577253944	61.883	0.53485	61.883	61.552	62.086	0					35	16	3	0	0	0	0.11684	1	25690	25690		1.8442	0	1	2727500	+		34873	13445	17190	17266	40767	40767					0.08247379902491048
TPLPRRGG	8	Unmodified	_TPLPRRGG_					0	0	0			REV__ENST00000497869.5_1_1:1146937-1148774:-|nuORF	REV__ENST00000497869.5_1_1:1146937-1148774:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2546264529228	2	427.253769	852.492984	0.82369	0.00035193	0.26316	0.00011244	1.0869	0.00046436	427.2539911210151	70.197	1.1677	70.197	69.675	70.842	0					71	37	3	0	0	0	0.89008	1	29270	29270		2.5775	0	1	2920500	+		34874	13484	17191	17267	40768	40768					0.06083757540000079
TPLVLPGGI	9	Unmodified	_TPLVLPGGI_					0	0	0		ENST00000403263.5_1_2:206863772-206864039:-|nuORF	ENST00000403263.5_1_2:206863772-206864039:-|nuORF	ENST00000403263.5_1_2:206863772-206864039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	433.7727233767509	2	433.770929	865.527304	2.3117	0.0010028	3.2684	0.0014177	5.5801	0.0024205	433.77230291629786	64.73	0.63541	65.057	64.591	65.226	0.32689					45	19	3	0	0	0	0.83213	1	27068	27068		2.0598	0	1	2160900			34875	6349	17192	17268	40769	40769					0.08916160908245274
TPQFPDMIL	9	Unmodified	_TPQFPDMIL_					0	0	0		ENSG00000204628|ENST00000512805|RACK1;ENST00000503170.1_1_5:180669321-180670896:-|nuORF;ENST00000514318.1_1_5:180670199-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF	ENSG00000204628|ENST00000512805|RACK1	ENSG00000204628|ENST00000512805|RACK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2707397341728	2	531.270435	1060.52632	2.5926	0.0013774	-2.0472	-0.0010876	0.54536	0.00028973	531.2700353445725	78.082	1.0678	79.363	78.95	80.017	1.2809					108	34	4	0	0	0	0.026734	6	32723	32675;32723;32774;32825;32867;32925		92.653	36.476	1	21994000			34876	5156	17193	17269	40770;40771;40772;40773;40774;40775	40771					-0.0015242152298924339
TPQFPDMIL	9	Unmodified	_TPQFPDMIL_					0	0	0		ENSG00000204628|ENST00000512805|RACK1;ENST00000503170.1_1_5:180669321-180670896:-|nuORF;ENST00000514318.1_1_5:180670199-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF	ENSG00000204628|ENST00000512805|RACK1	ENSG00000204628|ENST00000512805|RACK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2718994021416	2	531.270435	1060.52632	1.5526	0.00082485	-1.9521	-0.0010371	-0.39947	-0.00021223	531.2700582061168	77.572	0.98647	79.324	78.977	79.964	1.7514					102	31	5	0	0	0	0.037098	6	32658	32451;32499;32551;32607;32658;32730		78.728	27.515	1	20761000			34877	5156	17193	17269	40776;40777;40778;40779;40780;40781	40780					-0.0015242152298924339
TPQFPDMIL	9	Oxidation (M)	_TPQFPDM(Oxidation (M))IL_		TPQFPDM(1)IL		TPQFPDM(46)IL	0	0	1		ENSG00000204628|ENST00000512805|RACK1;ENST00000503170.1_1_5:180669321-180670896:-|nuORF;ENST00000514318.1_1_5:180670199-180670896:-|nuORF;ENST00000513060.5_1_5:180669121-180670896:-|nuORF;ENST00000508963.1_1_5:180668485-180670896:-|nuORF;ENST00000505461.5_1_5:180668319-180670896:-|nuORF	ENSG00000204628|ENST00000512805|RACK1	ENSG00000204628|ENST00000512805|RACK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2688476443291	2	539.267893	1076.52123	2.7672	0.0014922	-1.6952	-0.00091416	1.072	0.00057808	539.2673835234544	64.132	1.2548	66.06	65.329	66.583	1.928					81	39	4	0	0	0	0.1109	1	26744	26744		45.7	9.6554	1	3700500			34878	5156	17193	17270	40782	40782		93			-0.013967253856208117
TPRIPSRLL	9	Unmodified	_TPRIPSRLL_					0	0	0		ENST00000510359.1_1_5:106716958-106724204:-|nuORF;ENSG00000184349|ENST00000333274|EFNA5	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.8329955935478	2	526.832383	1051.65021	1.6754	0.00088264	-0.48161	-0.00025373	1.1938	0.00062891	526.8323099803459	96.618	0.093681	96.618	96.571	96.665	0					4	2	2	0	0	0	0.68551	1	40398	40398		7.9102	0	1	653490			34879	4691	17194	17271	40783	40783					0.12645417359499334
TPRIPSRLL	9	Unmodified	_TPRIPSRLL_					0	0	0		ENST00000510359.1_1_5:106716958-106724204:-|nuORF;ENSG00000184349|ENST00000333274|EFNA5	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.8342773318291	2	526.832383	1051.65021	4.1694	0.0021966	-1.0624	-0.0005597	3.107	0.0016369	526.8316378695794	94.668	0.38317	95.409	95.167	95.55	0.74124					25	11	3	0	0	0	0.68551	2	39795	39795;39847		7.9102	0	1	1392200			34880	4691	17194	17271	40784;40785	40784					0.12645417359499334
TPRIPSRLL	9	Unmodified	_TPRIPSRLL_					0	0	0		ENST00000510359.1_1_5:106716958-106724204:-|nuORF;ENSG00000184349|ENST00000333274|EFNA5	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.8332397341728	2	526.832383	1051.65021	3.3417	0.0017605	-1.4128	-0.00074432	1.9289	0.0010162	526.8316360471758	96.044	0.37224	96.446	96.175	96.547	0.40208					19	11	2	0	0	0	0.61249	1	40399	40399		10.824	0	1	2810700			34881	4691	17194	17271	40786	40786					0.12645417359499334
TPRIPSRLL	9	Unmodified	_TPRIPSRLL_					0	0	0		ENST00000510359.1_1_5:106716958-106724204:-|nuORF;ENSG00000184349|ENST00000333274|EFNA5	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	ENST00000510359.1_1_5:106716958-106724204:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	526.832383	1051.65021	2.8793	0.0015169	-3.6139	-0.0019039	-0.73468	-0.00038706	526.8308596684031	96.434	0.094917	96.539	96.479	96.573	0.105	0.0042593	-0.0025407	NaN	10.824	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445700			34882	4691	17194	17271							0.12645417359499334
TPSDVKELVL	10	Unmodified	_TPSDVKELVL_					0	0	0		ENSG00000140350|ENST00000465139|ANP32A;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENST00000560832.1_1_15:35529508-35529652:+|nuORF	ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.8146240115166	2	550.813522	1099.61249	1.928	0.0010619	0.10728	5.909E-05	2.0352	0.001121	550.8134016549049	41.726	0.37508	43.051	42.811	43.186	1.3254					39	11	4	0	0	0	0.074025	1	17470	17470		68.76	18.827	1	5267400			34883	2909	17195	17272	40787	40787					0.06666861583380523
TPSDVKELVL	10	Unmodified	_TPSDVKELVL_					0	0	0		ENSG00000140350|ENST00000465139|ANP32A;ENST00000495420.5_1_15:69079601-69113141:-|nuORF;ENST00000560832.1_1_15:35529508-35529652:+|nuORF	ENSG00000140350|ENST00000465139|ANP32A	ENSG00000140350|ENST00000465139|ANP32A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.8148071169853	2	550.813522	1099.61249	1.8785	0.0010347	1.2258	0.0006752	3.1043	0.0017099	550.8138366525643	41.248	0.39679	43.141	42.928	43.325	1.8927					36	12	4	0	0	0	0.054346	1	17273	17273		77.049	27.116	1	4579400			34884	2909	17195	17272	40788	40788					0.06666861583380523
TPSEIFKYG	9	Unmodified	_TPSEIFKYG_					0	0	0			REV__tr|A0A7D6VUJ5|A0A7D6VUJ5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_20835PE=4SV=1	REV__tr|A0A7D6VUJ5|A0A7D6VUJ5_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_20835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2653076052666	2	521.266207	1040.51786	1.3054	0.00068046	-3.1089	-0.0016206	-1.8035	-0.00094011	521.2644835648051	77.62	0.61324	79.371	79.009	79.622	1.7514					41	19	3	0	0	0	0.049839	1	32591	32591		68.081	4.1202	1	11848000	+		34885	15517	17196	17273	40789	40789					-0.0007765216794268781
TPSEPHPVL	9	Unmodified	_TPSEPHPVL_					0	0	0		ENST00000604759.1_1_14:39684672-39685536:+|nuORF;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;ENSG00000198492|ENST00000373812|YTHDF2	ENST00000604759.1_1_14:39684672-39685536:+|nuORF	ENST00000604759.1_1_14:39684672-39685536:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7598754763603	2	488.758549	975.502546	0.58508	0.00028596	2.723	0.0013309	3.3081	0.0016169	488.7592866798774	23.233	0.18473	24.884	24.746	24.93	1.6511					8	5	2	0	0	0	0.24063	1	9696	9696		28.487	17.663	1	539950			34886	5053	17197	17274	40790	40790					0.013814810348435458
TPSEPHPVL	9	Unmodified	_TPSEPHPVL_					0	0	0		ENST00000604759.1_1_14:39684672-39685536:+|nuORF;nc|ENSG00000198492|Q9Y5A9-2|YTHDF2;ENSG00000198492|ENST00000373812|YTHDF2	ENST00000604759.1_1_14:39684672-39685536:+|nuORF	ENST00000604759.1_1_14:39684672-39685536:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	488.758549	975.502546	1.3661	0.00066772	0.27794	0.00013585	1.6441	0.00080356	488.75827156283896	23.657	0.21303	24.871	24.688	24.901	1.2145	-0.0064371	-0.0014223	NaN	28.487	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	273010			34887	5053	17197	17274							0.013814810348435458
TPSLSFALV	9	Unmodified	_TPSLSFALV_					0	0	0		chr12:53672076-53672576|290|11.72|0.71|4.04|-|0|None,ATP5MC2|1	chr12:53672076-53672576|290|11.72|0.71|4.04|-|0|None,ATP5MC2|1	chr12:53672076-53672576|290|11.72|0.71|4.04|-|0|None,ATP5MC2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.7672912478447	2	467.765843	933.517133	2.3386	0.0010939	0.68943	0.00032249	3.028	0.0014164	467.76617277128844	68.159	0.46336	69.537	69.303	69.766	1.3778					49	14	5	0	0	0	0.09539	1	28678	28678		50.855	8.7605	1	46665000			34888	191	17198	17275	40791	40791					0.047715531829908286
TPSLSWGGL	9	Unmodified	_TPSLSWGGL_					0	0	0			REV__ENST00000495397.1_1_1:161695975-161696182:+|nuORF	REV__ENST00000495397.1_1_1:161695975-161696182:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1725952029228	2	459.239993	916.465432	2.2358	0.0010268	3.2988	0.0015149	5.5346	0.0025417	459.24156300407645	71.392	0.27776	72.733	72.658	72.936	1.3415					13	8	2	0	0	0	0.097511	1	30011	30011		7.2892	0	1	2059600	+		34889	13460	17199	17276	40792	40792					0.0038580948910293955
TPSSDVLVF	9	Unmodified	_TPSSDVLVF_					0	0	0		ENST00000486166.1_1_X:16871803-16876886:-|nuORF;ENST00000398588.2_1_6:58446590-58447106:-|nuORF;ENST00000401893.7_1_1:33116898-33134028:+|nuORF;RBBP7|p.I319Nfs*10|1|0.08|ENSG00000102054|chrX:16852558-16852559|-/T|frameshift_variant;nc|ENSG00000162521|Q09028-4|RBBP4;KIAA1522-RBBP4|1|fusion;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4;ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	964.5053588747978	1	964.498589	963.491313	2.0118	0.0019403	1.0378	0.001001	3.0496	0.0029413	964.5010707003408	60.073	0.29846	61.493	61.328	61.626	1.4196					18	9	2	0	0	0	0.076627	2	25164	25164;25216		57.471	25.354	1	2120400			34890	1378	17200	17277	40793;40794	40793					0.008106589407248066
TPSSDVLVF	9	Unmodified	_TPSSDVLVF_					0	0	0		ENST00000486166.1_1_X:16871803-16876886:-|nuORF;ENST00000398588.2_1_6:58446590-58447106:-|nuORF;ENST00000401893.7_1_1:33116898-33134028:+|nuORF;RBBP7|p.I319Nfs*10|1|0.08|ENSG00000102054|chrX:16852558-16852559|-/T|frameshift_variant;nc|ENSG00000162521|Q09028-4|RBBP4;KIAA1522-RBBP4|1|fusion;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4;ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	964.5015136599541	1	964.498589	963.491313	2.7894	0.0026904	-0.35132	-0.00033885	2.4381	0.0023515	964.5000646853708	59.545	0.35669	61.514	61.376	61.733	1.969					20	11	2	0	0	0	0.031324	1	24982	24982		85.357	40.95	1	1577500			34891	1378	17200	17277	40795	40795					0.008106589407248066
TPSSDVLVF	9	Unmodified	_TPSSDVLVF_					0	0	0		ENST00000486166.1_1_X:16871803-16876886:-|nuORF;ENST00000398588.2_1_6:58446590-58447106:-|nuORF;ENST00000401893.7_1_1:33116898-33134028:+|nuORF;RBBP7|p.I319Nfs*10|1|0.08|ENSG00000102054|chrX:16852558-16852559|-/T|frameshift_variant;nc|ENSG00000162521|Q09028-4|RBBP4;KIAA1522-RBBP4|1|fusion;nc|ENSG00000162521|Q09028-3|RBBP4;nc|ENSG00000162521|Q09028-2|RBBP4;ENSG00000162521|ENST00000373493|RBBP4;ENSG00000102054|ENST00000380087|RBBP7;nc|ENSG00000102054|Q16576-2|RBBP7	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	ENST00000486166.1_1_X:16871803-16876886:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	482.7558166384697	2	482.752933	963.491313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.619	1	61.588	61.088	62.088	1.969								0	0	0	0.16797	1	25018	25018		28.487	3.813	1				34892	1378	17200	17277	40796	40796					0.008106589407248066
TPSYVPEVM	9	Unmodified	_TPSYVPEVM_					0	0	0			REV__L1PA5_dup4809|chr6:151863684-151865093:+|1.0617149984704268|0.1855937726213876|2.52|421.0|83|3|anti-sense	REV__L1PA5_dup4809|chr6:151863684-151865093:+|1.0617149984704268|0.1855937726213876|2.52|421.0|83|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	511.3017150759697	2	511.746793	1021.47903	2.4977	0.0012782	2.4563	0.001257	4.954	0.0025352	511.74837589258544	68.253	0.45947	69.631	69.427	69.887	1.3778					21	14	2	0	0	0	0.097511	1	28734	28734		23.148	0	1	1270500	+		34893	14308	17201	17278	40797	40797					-0.03084700793965567
TPTFAIKL	8	Unmodified	_TPTFAIKL_					0	0	0			REV__tr|A0A553SLN7|A0A553SLN7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20995PE=3SV=1	REV__tr|A0A553SLN7|A0A553SLN7_NIACILysRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20995PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	890.5410644412041	1	890.534581	889.527304	2.2863	0.002036	3.5035	0.00312	5.7898	0.005156	890.5389796309577	89.5	0.18765	89.5	89.4	89.588	0					9	5	2	0	0	0	0.89051	1	37426	37426		2.3027	0	1	525390	+		34894	14991	17202	17279	40798	40798					0.07812160908224541
TPTILRVI	8	Unmodified	_TPTILRVI_					0	0	0			REV__tr|A0A553SKJ3|A0A553SKJ3_NIACIChaperoneproteinDnaJOS=NialliacirculansOX=1397GN=dnaJPE=3SV=1	REV__tr|A0A553SKJ3|A0A553SKJ3_NIACIChaperoneproteinDnaJOS=NialliacirculansOX=1397GN=dnaJPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7989684939384	2	456.797478	911.580402	2.2576	0.0010313	0.39795	0.00018178	2.6555	0.001213	456.79758891263936	68.001	0.45789	69.378	69.065	69.523	1.3778					25	14	3	0	0	0	0.88261	1	28468	28468		10.183	0	1	1772000	+		34895	14956	17203	17280	40799	40799					0.12107538690884212
TPTLVEVSR	9	Unmodified	_TPTLVEVSR_					0	0	0		CON__P02769;ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB;nc|ENSG00000163631|P02768-3|ALB	CON__P02769;ENSG00000163631|ENST00000295897|ALB	CON__P02769	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	500.4580261111259	2	501.284931	1000.55531	1.0472	0.00052496	-0.69974	-0.00035077	0.34748	0.00017419	501.28440356724906	26.429	0.18114	26.429	26.325	26.506	0					8	5	2	0	0	0	0.11619	1	11062	11062		10.8	2.644	1	281800		+	34896	341;340	17204	17281	40800	40800					0.05505439097657927
TPVGMYKEL	9	Unmodified	_TPVGMYKEL_					0	0	0		tr|A0A7D6VP77|A0A7D6VP77_9CLOTGlucosamine-6-phosphatedeaminaseOS=ClostridiumintestinaleOX=36845GN=nagBPE=3SV=1	tr|A0A7D6VP77|A0A7D6VP77_9CLOTGlucosamine-6-phosphatedeaminaseOS=ClostridiumintestinaleOX=36845GN=nagBPE=3SV=1	tr|A0A7D6VP77|A0A7D6VP77_9CLOTGlucosamine-6-phosphatedeaminaseOS=ClostridiumintestinaleOX=36845GN=nagBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1402465701103	2	519.270435	1036.52632	3.1391	0.0016301	1.6318	0.00084732	4.7709	0.0024774	519.2713870413113	59.977	0.37738	61.947	61.763	62.14	1.969					13	11	2	0	0	0	0.11463	1	25147	25147		4.3292	0	1	598020			34897	16758	17205	17282	40801	40801					0.009515784770201208
TPVISNNNQ	9	Unmodified	_TPVISNNNQ_					0	0	0			REV__tr|A0A7D6ZF61|A0A7D6ZF61_9CLOTS8familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13575PE=3SV=1	REV__tr|A0A7D6ZF61|A0A7D6ZF61_9CLOTS8familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13575PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.3087341189384	2	493.748713	985.482873	3.0124	0.0014873	-1.3152	-0.0006494	1.6971	0.00083795	493.747351797916	82.551	0.34002	84.221	84.017	84.358	1.67					18	10	2	0	0	0	0.08828	1	34599	34599		28.487	4.4663	1	1659800	+		34898	15628	17206	17283	40802	40802					-0.010448949759052084
TPYNIVLFL	9	Unmodified	_TPYNIVLFL_					0	0	0		ENSG00000183813|ENST00000330953|CCR4	ENSG00000183813|ENST00000330953|CCR4	ENSG00000183813|ENST00000330953|CCR4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	540.2683593630791	2	540.310418	1078.60628	3.4559	0.0018673	0.78306	0.00042309	4.239	0.0022904	540.310264902318	60.468	0.31606	62.434	62.26	62.577	1.9653					11	9	2	0	0	0	0.10844	1	25359	25359		11.64	1.5664	1	362100			34899	4669	17207	17284	40803	40803					0.07012388142516102
TQAPFHGGS	9	Unmodified	_TQAPFHGGS_					0	0	0		ENST00000425802.1_1_1:52499214-52509659:+|nuORF	ENST00000425802.1_1_1:52499214-52509659:+|nuORF	ENST00000425802.1_1_1:52499214-52509659:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1420165896416	3	301.143603	900.40898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6274	1	3.6274	3.1274	4.1274	0								0	0	0	0.42693	1	1490	1490		1.0715	0	1				34900	6465	17208	17285	40804	40804					-0.04520818347555178
TQDELLVYNK	10	Unmodified	_TQDELLVYNK_					0	0	0		nc|ENSG00000124233|P04279-2|SEMG1;ENSG00000124233|ENST00000372781|SEMG1;ENSG00000124157|ENST00000372769|SEMG2	nc|ENSG00000124233|P04279-2|SEMG1	nc|ENSG00000124233|P04279-2|SEMG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	408.7324706912041	3	408.215316	1221.62412	0.0024205	9.8808E-07	1.3174	0.0005378	1.3199	0.00053879	408.2159349686694	12.073	0.3434	12.86	12.781	13.124	0.78751					15	10	2	0	0	0	0.1249	1	5056	5056		8.9762	1.4992	1	1256800			34901	2211	17209	17286	40805	40805					0.022170586067204567
TQEQEEQLA	9	Unmodified	_TQEQEEQLA_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;ENSG00000141519|ENST00000397545|CCDC40;ENST00000572253.5_1_17:78055494-78060128:+|nuORF;nc|ENSG00000141519|Q4G0X9-2|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MSMS	GG20161007_CRH_Patient100_A02_02	2	359.1681701540947	3	359.168254	1074.48293	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.54	1	90.749	90.249	91.249	0.20904								0	0	0	0.42693	1	37939	37939		1.1933	0.12188	1				34902	2964	17210	17287	40806	40806					-0.051329397665540455
TQGRRFITL	9	Unmodified	_TQGRRFITL_					0	0	0		ENSG00000135537|ENST00000368977|AFG1L	ENSG00000135537|ENST00000368977|AFG1L	ENSG00000135537|ENST00000368977|AFG1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3230468630791	2	546.31964	1090.62473	1.4024	0.00076614	-2.087	-0.0011402	-0.68469	-0.00037406	546.3181338987521	70.559	0.092064	72.397	72.319	72.411	1.8378					4	2	2	0	0	0	0.32838	1	29601	29601		24.021	2.2739	1	21745000			34903	2672	17211	17288	40807	40807					0.08303942837073919
TQHVYHKYRRR	11	Unmodified	_TQHVYHKYRRR_					0	0	0		ENSG00000155506|ENST00000518297|LARP1;nc|ENSG00000155506|Q6PKG0-3|LARP1	ENSG00000155506|ENST00000518297|LARP1	ENSG00000155506|ENST00000518297|LARP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1544.342822253704	1	1543.83529	1542.82801	-0.37702	-0.00058206	-2.6298	-0.00406	-3.0068	-0.0046421	1544.8363525449415	36.717	0.19169	38.534	38.496	38.688	1.8176					18	12	3	0	0	0	0.14606	1	15413	15413		1.1933	0	1	61614000			34904	3422	17212	17289	40808	40808					0.07831060611374596
TQIRTKLV	8	Unmodified	_TQIRTKLV_					0	0	0			REV__ENSG00000182902|ENST00000327451|SLC25A18	REV__ENSG00000182902|ENST00000327451|SLC25A18	MSMS	GG20161007_CRH_Patient100_W632_02	4	479.8051635622978	2	479.805834	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.513	1	55.482	54.982	55.982	1.9697								0	0	0	1.0178	1	22420	22420		7.9102	1.187	1		+		34905	11369	17213	17290	40809	40809					0.1166203957683365
TQKTGRPR	8	Unmodified	_TQKTGRPR_					0	0	0		ENST00000450723.5_1_7:91761137-91764086:-|nuORF	ENST00000450723.5_1_7:91761137-91764086:-|nuORF	ENST00000450723.5_1_7:91761137-91764086:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2756225466728	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.088	1	67.088	66.588	67.588	0								0	0	0	1.0178	1	27940	27940		0.69038	0	1				34906	6608	17214	17291	40810	40810					0.062345275974166725
TQLGPPYHIL	10	Unmodified	_TQLGPPYHIL_					0	0	0		ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3178588747978	2	569.816399	1137.61824	2.6501	0.0015101	-1.6537	-0.0009423	0.99642	0.00056778	569.8147848782847	50.112	0.35195	51.503	51.261	51.613	1.3911					15	10	2	0	0	0	0.41677	1	20972	20972		32.305	9.5692	1	638340			34907	2076	17215	17292	40811	40811					0.05494004885713366
TQLGPPYHIL	10	Unmodified	_TQLGPPYHIL_					0	0	0		ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	ENSG00000119616|ENST00000341162|FCF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8185912966728	2	569.816399	1137.61824	1.743	0.00099321	-0.59307	-0.00033794	1.15	0.00065527	569.816328233407	49.47	0.34657	51.447	51.255	51.601	1.9772					14	10	2	0	0	0	0.5476	1	20724	20724		25.399	8.2864	1	538480			34908	2076	17215	17292	40812	40812					0.05494004885713366
TQLLKLKRLLH	11	Unmodified	_TQLLKLKRLLH_					0	0	0		ENST00000498300.5_1_10:86198319-86273265:+|nuORF;nc|ENSG00000107771|Q9H7U1-4|CCSER2;CCSER2|p.A763Efs*315|1|0.03|ENSG00000107771|chr10:84477626-84477627|-/AA|frameshift_variant;nc|ENSG00000107771|Q9H7U1|CCSER2;ENSG00000107771|ENST00000372088|CCSER2	ENST00000498300.5_1_10:86198319-86273265:+|nuORF	ENST00000498300.5_1_10:86198319-86273265:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.9816161990166	4	341.479049	1361.88709	-2.0537	-0.0007013	-2.3221	-0.00079294	-4.3758	-0.0014942	341.4780828238355	27.659	1.2612	27.659	26.716	27.978	0					127	41	6	0	0	0	1.0391	1	11357	11357		0.40827	0.31342	1	29982000			34909	127	17216	17293	40813	40813					0.22062143853031557
TQLPYEYYSLP	11	Unmodified	_TQLPYEYYSLP_					0	0	0		TM9SF4-TTLL9|3|fusion;TM9SF4-TTLL9|2|fusion;ENSG00000101337|ENST00000398022|TM9SF4;ASXL1-TM9SF4|1|fusion	TM9SF4-TTLL9|3|fusion	TM9SF4-TTLL9|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	687.8357421755791	2	687.334818	1372.65508	1.8125	0.0012458	-2.7569	-0.0018949	-0.94446	-0.00064916	687.3326966219139	69.234	0.37292	69.234	69.047	69.42	0					26	11	3	0	0	0	0.97491	1	28797	28797		5.2969	1.1074	1	795800			34910	84	17217	17294	40814	40814					-0.016337880790388226
TQLPYEYYSLP	11	Unmodified	_TQLPYEYYSLP_					0	0	0		TM9SF4-TTLL9|3|fusion;TM9SF4-TTLL9|2|fusion;ENSG00000101337|ENST00000398022|TM9SF4;ASXL1-TM9SF4|1|fusion	TM9SF4-TTLL9|3|fusion	TM9SF4-TTLL9|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	687.3330566287041	2	687.334818	1372.65508	1.4064	0.00096665	-3.7696	-0.002591	-2.3633	-0.0016243	687.332809898816	68.881	0.31265	69.204	69.064	69.376	0.32224					24	9	3	0	0	0	0.58697	1	28828	28828		21.537	4.4241	1	922420			34911	84	17217	17294	40815	40815					-0.016337880790388226
TQLPYEYYSLP	11	Unmodified	_TQLPYEYYSLP_					0	0	0		TM9SF4-TTLL9|3|fusion;TM9SF4-TTLL9|2|fusion;ENSG00000101337|ENST00000398022|TM9SF4;ASXL1-TM9SF4|1|fusion	TM9SF4-TTLL9|3|fusion	TM9SF4-TTLL9|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	687.3342773318291	2	687.334818	1372.65508	1.6912	0.0011624	-2.2614	-0.0015543	-0.57019	-0.00039191	687.3328727272783	67.878	0.36589	69.256	69.125	69.491	1.3778					24	11	3	0	0	0	0.77451	1	28492	28492		16.149	3.9084	1	1764800			34912	84	17217	17294	40816	40816					-0.016337880790388226
TQLPYEYYSLP	11	Unmodified	_TQLPYEYYSLP_					0	0	0		TM9SF4-TTLL9|3|fusion;TM9SF4-TTLL9|2|fusion;ENSG00000101337|ENST00000398022|TM9SF4;ASXL1-TM9SF4|1|fusion	TM9SF4-TTLL9|3|fusion	TM9SF4-TTLL9|3|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	687.3323852419853	2	687.334818	1372.65508	0.91911	0.00063173	-1.7062	-0.0011727	-0.78706	-0.00054097	687.3336775303385	67.441	0.37149	69.311	69.147	69.519	1.87					24	11	3	0	0	0	0.77451	1	28310	28310		16.149	3.1066	1	1391700			34913	84	17217	17294	40817	40817					-0.016337880790388226
TQQPIQLPP	9	Unmodified	_TQQPIQLPP_					0	0	0			REV__SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	REV__SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.1945678591728	3	341.194075	1020.5604	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.533	1	97.624	97.124	98.124	0.090881								0	0	0	0.42693	1	40810	40810		1.0715	0	1		+		34914	10074	17218	17295	40818	40818					0.05093742960275449
TQSKTKKA	8	Unmodified	_TQSKTKKA_					0	0	0			REV__ENSG00000159259|ENST00000314103|CHAF1B	REV__ENSG00000159259|ENST00000314103|CHAF1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	446.2665588259697	2	446.266542	890.51853	3.3942	0.0015147	-3.7158	-0.0016582	-0.32153	-0.00014349	446.2648763038198	103.39	0.068062	103.57	103.53	103.6	0.18066					6	2	3	0	0	0	0.89181	1	43529	43529		0.6015	0	1	47393000	+		34915	10570	17219	17296	40819	40819					0.06889187271747232
TQVEKNYMKLR	11	Unmodified	_TQVEKNYMKLR_					0	0	0			REV__nc|ENSG00000081019|Q5VWQ0-4|RSBN1	REV__nc|ENSG00000081019|Q5VWQ0-4|RSBN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	705.4171630740166	2	705.382111	1408.74967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.81	1	98.066	97.566	98.566	0.25636								0	0	0	0.63772	1	41151	41151		10.151	2.5416	1		+		34916	8812	17220	17297	40820	40820					0.06164447191281397
TQWPCPSH	8	Unmodified	_TQWPCPSH_					0	0	0			REV__ENST00000578975.1_1_19:40747718-40748063:-|nuORF	REV__ENST00000578975.1_1_19:40747718-40748063:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	478.2074767947197	2	478.20817	954.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.04	1	104.04	103.54	104.54	0								0	0	0	1.0178	1	43834	43834		2.5775	0	1		+		34917	13994	17221	17298	40821	40821					-0.07723874219641402
TRAPVSEK	8	Unmodified	_TRAPVSEK_					0	0	0			REV__ENSG00000145863|ENST00000274545|GABRA6	REV__ENSG00000145863|ENST00000274545|GABRA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	444.2527953982353	2	444.250892	886.48723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.354	1	22.577	22.077	23.077	0.223								0	0	0	1.0178	1	9311	9311		5.2307	0	1		+		34918	9269	17222	17299	40822	40822					0.039446142376732496
TRDHLDFHLTF	11	Unmodified	_TRDHLDFHLTF_					0	0	0		tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	701.3497802615166	2	701.349126	1400.6837	1.4985	0.001051	0.92561	0.00064918	2.4241	0.0017001	701.3491877561825	43.609	0.24546	44.962	44.795	45.041	1.3536					13	7	3	0	0	0	0.91768	1	18283	18283		8.7454	3.0136	1	743270			34919	16711	17223	17300	40823	40823					-0.0006162565928207187
TRDHLDFHLTF	11	Unmodified	_TRDHLDFHLTF_					0	0	0		tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	701.3505737185478	2	701.349126	1400.6837	1.2264	0.00086013	0.95212	0.00066777	2.1785	0.0015279	701.3489171777421	43	0.26862	44.921	44.781	45.049	1.9211					17	8	3	0	0	0	0.91768	1	18019	18019		8.7454	0	1	1132600			34920	16711	17223	17300	40824	40824					-0.0006162565928207187
TRECPCQAAS	10	Unmodified	_TRECPCQAAS_					0	0	0		ENST00000428932.1_1_1:1355723-1357861:+|nuORF	ENST00000428932.1_1_1:1355723-1357861:+|nuORF	ENST00000428932.1_1_1:1355723-1357861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2282592654228	2	533.226233	1064.43791	1.6752	0.00089324	3.1162	0.0016616	4.7914	0.0025549	533.228051452864	83.689	0.37718	84.876	84.673	85.05	1.1879					30	11	4	0	0	0	0.82659	1	35114	35114		9.3831	0.78985	1	3750600			34921	6484	17224	17301	40825	40825					-0.09172785105124603
TREHQVLYN	9	Unmodified	_TREHQVLYN_					0	0	0			REV__ZNF473|p.R712Pfs*8|1|0.23|ENSG00000142528|chr19:50046575-50046576|-/C|frameshift_variant	REV__ZNF473|p.R712Pfs*8|1|0.23|ENSG00000142528|chr19:50046575-50046576|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	387.1513244509697	3	387.2	1158.57817	1.7612	0.00068192	2.7123	0.0010502	4.4734	0.0017321	387.20045504464713	42.748	0.56123	43.069	42.788	43.349	0.32058					31	18	3	0	0	0	0.11916	1	17914	17914		0.96228	0	1	1560400	+		34922	10180	17225	17302	40826	40826					0.005224582151640789
TREHQVLYN	9	Unmodified	_TREHQVLYN_					0	0	0			REV__ZNF473|p.R712Pfs*8|1|0.23|ENSG00000142528|chr19:50046575-50046576|-/C|frameshift_variant	REV__ZNF473|p.R712Pfs*8|1|0.23|ENSG00000142528|chr19:50046575-50046576|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	387.2	1158.57817	-0.092499	-3.5816E-05	3.9049	0.001512	3.8124	0.0014761	387.2007960590083	43.245	0.49529	43.245	43.028	43.523	0	0.087844	0.0010152	NaN	0.96228	25	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	951380	+		34923	10180	17225	17302							0.005224582151640789
TRFIMEEK	8	Unmodified	_TRFIMEEK_					0	0	0		tr|A0A7D6VND0|A0A7D6VND0_9CLOT2'-5'RNAligaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12200PE=4SV=1	tr|A0A7D6VND0|A0A7D6VND0_9CLOT2'-5'RNAligaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12200PE=4SV=1	tr|A0A7D6VND0|A0A7D6VND0_9CLOT2'-5'RNAligaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.8516418337822	3	351.851432	1052.53247	-0.17142	-6.0313E-05	1.1593	0.0004079	0.98789	0.00034759	351.8516261859079	12.427	0.33782	12.516	12.433	12.771	0.08938					14	10	2	0	0	0	0.88055	1	5171	5171		6.2058	3.1335	1	1056900			34924	16729	17226	17303	40827	40827					0.008300967085460798
TRFPVALAP	9	Unmodified	_TRFPVALAP_					0	0	0		ENST00000600380.1_1_13:99101286-99101697:+|nuORF	ENST00000600380.1_1_13:99101286-99101697:+|nuORF	ENST00000600380.1_1_13:99101286-99101697:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2870361208916	2	486.287277	970.560001	2.3619	0.0011486	-3.1872	-0.0015499	-0.82529	-0.00040133	486.28561225063333	89.603	0.40923	89.603	89.338	89.747	0					22	12	2	0	0	0	0.82604	1	37460	37460		2.3027	0	1	2857900			34925	7538	17227	17304	40828	40828					0.0735436803106495
TRGIGRAF	8	Unmodified	_TRGIGRAF_					0	0	0		ENST00000258416.7_2_2:233433780-233433864:+|nuORF	ENST00000258416.7_2_2:233433780-233433864:+|nuORF	ENST00000258416.7_2_2:233433780-233433864:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2550842165947	2	439.253769	876.492984	2.7573	0.0012112	-2.5193	-0.0011066	0.23804	0.00010456	439.25206732274063	72.031	0.48639	73.855	73.57	74.056	1.824					31	15	3	0	0	0	0.88587	1	30141	30141		5.2307	0	1	9800100			34926	5610	17228	17305	40829	40829					0.049797575399907146
TRGIGRAF	8	Unmodified	_TRGIGRAF_					0	0	0		ENST00000258416.7_2_2:233433780-233433864:+|nuORF	ENST00000258416.7_2_2:233433780-233433864:+|nuORF	ENST00000258416.7_2_2:233433780-233433864:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	439.253769	876.492984	2.6624	0.0011695	-4.5455	-0.0019966	-1.8832	-0.00082718	439.2514146861175	73.223	0.47614	73.548	73.34	73.816	0.32494	-0.098853	-0.00062844	NaN	5.2307	39	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18127000			34927	5610	17228	17305							0.049797575399907146
TRGIVILD	8	Unmodified	_TRGIVILD_					0	0	0			REV__ENST00000377242.7_1_10:20466301-20506418:+|nuORF	REV__ENST00000377242.7_1_10:20466301-20506418:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.7727233767509	2	443.77146	885.528367	3.3764	0.0014983	-0.29121	-0.00012923	3.0852	0.0013691	443.77121857030954	104.45	0.11241	104.62	104.56	104.67	0.1731					11	5	3	0	0	0	0.88663	1	44191	44191		4.756	0	1	31948000	+		34928	12726	17229	17306	40830	40830					0.08102375277132978
TRGKARLR	8	Unmodified	_TRGKARLR_					0	0	0		ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.3091003298759	2	479.306867	956.599181	3.2095	0.0015384	1.5165	0.00072689	4.7261	0.0022652	479.30769740561703	106.6	0.1526	106.76	106.69	106.84	0.16174					20	7	4	0	0	0	0.89178	1	45631	45631		0.69038	0	1	25573000			34929	6396	17230	17307	40831	40831					0.11914513105318747
TRGKARLR	8	Unmodified	_TRGKARLR_					0	0	0		ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	479.306867	956.599181	1.5172	0.00072722	1.0531	0.00050476	2.5703	0.001232	479.3076871316374	106.69	0.097038	106.69	106.63	106.72	0	-0.055096	-5.5134E-05	NaN	0.69038	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1340300			34930	6396	17230	17307							0.11914513105318747
TRGKARLR	8	Unmodified	_TRGKARLR_					0	0	0		ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	ENST00000413818.2_1_20:45981315-45981879:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	479.306867	956.599181	3.2615	0.0015633	0.66854	0.00032044	3.9301	0.0018837	479.3074993019799	106.62	0.14178	106.78	106.7	106.84	0.15781	0.035219	-0.00042378	NaN	0.69038	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19821000			34931	6396	17230	17307							0.11914513105318747
TRGKSISL	8	Unmodified	_TRGKSISL_					0	0	0		HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant;nc|ENSG00000143341|Q96RW7-2|HMCN1;ENSG00000143341|ENST00000271588|HMCN1	HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant	HMCN1|p.T3358Sfs*4|1|0.06|ENSG00000143341|chr1:186093545-186093546|-/GT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	431.2638427615166	2	431.261259	860.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.23	1	103.29	102.79	103.79	0.059502								0	0	0	1.0178	1	43269	43269		4.756	0	1				34932	3025	17231	17308	40832	40832					0.07213204617346491
TRGLDVLI	8	Unmodified	_TRGLDVLI_					0	0	0			REV__nc|ENSG00000136111|O60343-4|TBC1D4	REV__nc|ENSG00000136111|O60343-4|TBC1D4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7733032107353	2	443.77146	885.528367	3.3748	0.0014977	1.189	0.00052765	4.5639	0.0020253	443.7718451308999	104.49	0.092674	104.65	104.58	104.67	0.16055					9	4	3	0	0	0	0.88663	1	44271	44271		4.756	0	1	32646000	+		34933	9973	17232	17309	40833	40833					0.08102375277155716
TRGLDVLI	8	Unmodified	_TRGLDVLI_					0	0	0			REV__nc|ENSG00000136111|O60343-4|TBC1D4	REV__nc|ENSG00000136111|O60343-4|TBC1D4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	443.77146	885.528367	0.93728	0.00041594	1.7831	0.00079127	2.7203	0.0012072	443.77317335651094	104.54	0.072128	104.54	104.49	104.56	0	-0.066279	0.0011971	NaN	4.756	7	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24164000	+		34934	9973	17232	17309							0.08102375277155716
TRGLDVLI	8	Unmodified	_TRGLDVLI_					0	0	0			REV__nc|ENSG00000136111|O60343-4|TBC1D4	REV__nc|ENSG00000136111|O60343-4|TBC1D4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	443.77146	885.528367	3.3764	0.0014983	-0.29121	-0.00012923	3.0852	0.0013691	443.77121857030954	104.45	0.11241	104.62	104.56	104.67	0.1731	0.021991	-0.00064394	NaN	4.756	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31948000	+		34935	9973	17232	17309							0.08102375277155716
TRGLGKTH	8	Unmodified	_TRGLGKTH_					0	0	0		ENST00000512692.6_1_4:141206332-141290472:-|nuORF	ENST00000512692.6_1_4:141206332-141290472:-|nuORF	ENST00000512692.6_1_4:141206332-141290472:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2524597048759	2	435.251226	868.487899	3.031	0.0013192	-0.1037	-4.5136E-05	2.9273	0.0012741	435.251240006099	74.68	1.0354	75.005	74.646	75.681	0.32464					59	32	3	0	0	0	0.89124	1	31252	31252		1.8442	0	1	11212000			34936	7043	17233	17310	40834	40834					0.048394536773685104
TRGLLIVI	8	Unmodified	_TRGLLIVI_					0	0	0		tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5978881716728	1	884.592764	883.585488	3.0217	0.0026729	-0.89253	-0.00078953	2.1291	0.0018834	884.5918820217089	108.33	0.9708	108.49	108.32	109.29	0.15781					94	50	3	0	0	0	0.89051	1	46757	46757		2.3027	0	1	80099000			34937	16915	17234	17311	40835	40835					0.13903842553509094
TRGLLIVI	8	Unmodified	_TRGLLIVI_					0	0	0		tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	884.592764	883.585488	1.1598	0.0010259	1.3266	0.0011735	2.4864	0.0021995	884.5938658047653	108.35	0.13519	108.35	108.28	108.42	0	-0.068572	0.0015079	NaN	2.3027	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15750000			34938	16915	17234	17311							0.13903842553509094
TRGLLIVI	8	Unmodified	_TRGLLIVI_					0	0	0		tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	884.592764	883.585488	2.804	0.0024804	1.7084	0.0015112	4.5124	0.0039916	884.5948702655448	108.34	0.12517	108.39	108.32	108.44	0.050644	-0.030635	0.0018456	NaN	2.3027	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2923100			34939	16915	17234	17311							0.13903842553509094
TRGLLIVI	8	Unmodified	_TRGLLIVI_					0	0	0		tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	tr|A0A7D6VTE3|A0A7D6VTE3_9CLOTGuanylatekinaseOS=ClostridiumintestinaleOX=36845GN=gmkPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	884.592764	883.585488	3.1171	0.0027574	-1.823	-0.0016126	1.2941	0.0011447	884.5908155839875	108.3	0.61237	108.45	108.37	108.98	0.15795	0.032184	-0.0012782	NaN	2.3027	58	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20856000			34940	16915	17234	17311							0.13903842553509094
TRGRSPPV	8	Unmodified	_TRGRSPPV_					0	0	0		ENST00000400274.5_1_21:47958491-47959840:+|nuORF	ENST00000400274.5_1_21:47958491-47959840:+|nuORF	ENST00000400274.5_1_21:47958491-47959840:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2520019412041	2	435.251226	868.487899	3.031	0.0013192	-0.1037	-4.5136E-05	2.9273	0.0012741	435.251240006099	74.68	1.0354	75.005	74.646	75.681	0.32464					59	32	3	0	0	0	0.89051	1	31311	31311		2.3027	0	1	11212000			34941	6342	17235	17312	40836	40836					0.04839453677379879
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1060.699877917767	1	1060.69494	1059.68766	3.3784	0.0035834	1.8749	0.0019887	5.2533	0.0055722	1060.6966303858344	107.58	0.21162	107.63	107.52	107.73	0.052452					29	10	4	0	0	0	0.85403	1	46029	46029		0	0	1	224880000			34942	1446	17236	17313	40837	40837					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8531982302666	2	530.851107	1059.68766	3.1868	0.0016917	1.0225	0.00054281	4.2094	0.0022346	530.8517094803135	106.03	0.20364	106.19	106.1	106.3	0.15781					34	10	5	0	0	0	0.85403	1	45355	45355		0	0	1	806590000			34943	1446	17236	17313	40838	40838					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1060.699877917767	1	1060.69494	1059.68766	3.7744	0.0040035	0.53796	0.00057061	4.3124	0.0045741	1060.695308443786	107.55	0.20329	107.71	107.6	107.81	0.15781					41	10	5	0	0	0	0.85403	1	46260	46260		0	0	1	496710000			34944	1446	17236	17313	40839	40839					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.8528930544853	2	530.851107	1059.68766	3.1871	0.0016919	1.328	0.00070497	4.5151	0.0023969	530.8518555269743	107.57	0.22183	107.73	107.6	107.83	0.15781					47	11	5	0	0	0	0.85403	1	46329	46329		0	0	1	1952299999.9999998			34945	1446	17236	17313	40840	40840					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8527099490166	2	530.851107	1059.68766	3.4588	0.0018361	0.70824	0.00037597	4.167	0.0022121	530.851453144363	106.01	0.18445	106.18	106.09	106.27	0.16174					35	9	5	0	0	0	0.85403	1	45275	45275		0	0	1	942430000			34946	1446	17236	17313	40841	40841					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8530151247978	2	530.851107	1059.68766	3.4567	0.001835	0.29357	0.00015584	3.7502	0.0019908	530.851383019886	107.55	0.24409	107.71	107.56	107.81	0.15795					44	12	5	0	0	0	0.85403	1	46251	46251		0	0	1	2067699999.9999998			34947	1446	17236	17313	40842	40842					0.16020508625138064
TRGSKKKKK	9	Unmodified	_TRGSKKKKK_					0	0	0		nc|ENSG00000103994|Q9H2Y7-2|ZNF106;nc|ENSG00000103994|Q9H2Y7|ZNF106;ENSG00000103994|ENST00000564754|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	nc|ENSG00000103994|Q9H2Y7-2|ZNF106	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1060.698535144329	1	1060.69494	1059.68766	3.9147	0.0041523	0.0071302	7.563E-06	3.9219	0.0041599	1060.694738719083	107.55	0.20621	107.71	107.58	107.79	0.15796					39	10	5	0	0	0	0.85403	1	46263	46263		0	0	1	502060000			34948	1446	17236	17313	40843	40843					0.16020508625138064
TRGSKMKKLVY	11	Unmodified	_TRGSKMKKLVY_					0	0	0		ENST00000564761.3_1_16:59788371-59788764:-|nuORF	ENST00000564761.3_1_16:59788371-59788764:-|nuORF	ENST00000564761.3_1_16:59788371-59788764:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1999084353447	4	328.445783	1309.75403	-2.289	-0.00075181	-0.95884	-0.00031493	-3.2478	-0.0010667	328.4454671998084	33.441	0.37368	33.441	33.233	33.607	0					28	11	3	0	0	0	0.14606	1	13988	13988		1.2148	0	1	1424200			34949	7351	17237	17314	40844	40844					0.11153956404859855
TRHEGSFQ	8	Unmodified	_TRHEGSFQ_					0	0	0		ENST00000543147.1_1_12:9908815-9913428:-|nuORF;ENST00000416624.6_1_12:9907639-9913428:-|nuORF;ENSG00000110848|ENST00000228434|CD69	ENST00000543147.1_1_12:9908815-9913428:-|nuORF	ENST00000543147.1_1_12:9908815-9913428:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	321.1553222537041	3	321.154391	960.441343	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.221	1	87.347	86.847	87.847	1.1265								0	0	0	1.0178	1	36302	36302		0.45834	0	1				34950	1719	17238	17315	40845	40845					-0.040460309445620624
TRHKVLLRRLL	11	Unmodified	_TRHKVLLRRLL_					0	0	0		ENSG00000160877|ENST00000292431|NACC1;chr19:13116935-13117994|406|13.75|0.0|20.39|+|ENST00000586171|NACC1,NACC1;ENSG00000160877.6,NACC1,chr19,+,I2.1,13118132,13118263|247|7.59|2|intron;ENSG00000160877.6,NACC1,chr19,+,I2.1,13118132,13118263|247|7.59|3|intron;ENSG00000160877.6,NACC1,chr19,+,I2.1,13118132,13118263|247|7.59|1|intron	ENSG00000160877|ENST00000292431|NACC1	ENSG00000160877|ENST00000292431|NACC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9675170779228	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.89	1	117.89	117.39	118.39	0								0	0	0	0.63775	1	50816	50816		0	0	1				34951	223	17239	17316	40846	40846					0.2343177069574267
TRHLLQRR	8	Unmodified	_TRHLLQRR_					0	0	0		ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3309203982353	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89178	1	29419	29419		0.69038	0	1	3238400			34952	4901	17240	17317	40847	40847					0.1110158702535955
TRHLLQRR	8	Unmodified	_TRHLLQRR_					0	0	0		ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	ENSG00000189227|ENST00000342683|C15orf61	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3311645388603	2	540.330873	1078.64719	1.3314	0.00071939	-0.14908	-8.0553E-05	1.1823	0.00063884	540.3307178135227	69.951	1.3958	70.273	69.312	70.708	0.32224					115	44	3	0	0	0	0.89178	1	29362	29362		0.69038	0	1	4212400			34953	4901	17240	17317	40848	40848					0.1110158702535955
TRIILGTW	8	Unmodified	_TRIILGTW_					0	0	0			REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2875854372978	2	480.287277	958.560001	2.2216	0.001067	-1.4179	-0.00068098	0.80379	0.00038605	480.2866144868996	59.032	0.91661	60.452	60.198	61.115	1.4196					72	29	5	0	0	0	0.30755	4	24728	24685;24728;24779;24835		71.134	33.16	1	149460000	+		34954	15715	17241	17318	40849;40850;40851;40852	40850					0.07906368031081001
TRIILGTW	8	Unmodified	_TRIILGTW_					0	0	0			REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2876464724541	2	480.287277	958.560001	1.686	0.00080975	-1.1718	-0.00056282	0.51413	0.00024693	480.28670882784684	58.52	0.66311	60.489	60.181	60.844	1.969					69	21	5	0	0	0	0.30755	4	24505	24463;24505;24556;24611		71.134	38.828	1	113370000	+		34955	15715	17241	17318	40853;40854;40855;40856	40854					0.07906368031081001
TRIILGTW	8	Unmodified	_TRIILGTW_					0	0	0			REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.287277	958.560001	2.2216	0.001067	-1.4179	-0.00068098	0.80379	0.00038605	480.2866144868996	59.032	0.91661	60.452	60.198	61.115	1.4196	-0.018496	-0.00011497	NaN	71.134	72	29	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	149460000	+		34956	15715	17241	17318							0.07906368031081001
TRIILGTW	8	Unmodified	_TRIILGTW_					0	0	0			REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	REV__tr|A0A7D6ZTE6|A0A7D6ZTE6_9CLOTHelix-turn-helixtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_11005PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	480.287277	958.560001	1.686	0.00080975	-1.1718	-0.00056282	0.51413	0.00024693	480.28670882784684	58.52	0.66311	60.489	60.181	60.844	1.969	0.018496	0.00012135	NaN	71.134	69	21	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113370000	+		34957	15715	17241	17318							0.07906368031081001
TRIMRWRR	8	Unmodified	_TRIMRWRR_					0	0	0		ENST00000322213.8_1_X:53423292-53423446:-|nuORF	ENST00000322213.8_1_X:53423292-53423446:-|nuORF	ENST00000322213.8_1_X:53423292-53423446:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	392.2295410037041	3	392.229459	1173.66655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.17	1	110.33	109.83	110.83	0.16133								0	0	0	1.0178	1	47865	47865		0	0	1				34958	5853	17242	17319	40857	40857					0.08666220044619877
TRIQLSWLLP	10	Unmodified	_TRIQLSWLLP_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MSMS	GG20161007_CRH_Patient100_A02_01	1	409.5808898806572	3	409.580041	1225.71829	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.752	1	92.752	92.252	93.252	0								0	0	0	0.66068	1	38764	38764		3.3196	0.82116	1				34959	3010	17243	17320	40858	40858					0.11446242219517444
TRIQLSWLLP	10	Unmodified	_TRIQLSWLLP_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	409.5812560915947	3	409.580041	1225.71829	2.8315	0.0011597	0.23831	9.7609E-05	3.0698	0.0012573	409.5800337105037	91.955	0.58084	92.146	91.755	92.336	0.19042					33	17	2	0	0	0	0.8872	2	38482	38431;38482		2.8433	0.75728	1	928580			34960	3010	17243	17320	40859;40860	40860					0.11446242219517444
TRIQLSWLLP	10	Unmodified	_TRIQLSWLLP_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	409.5823547244072	3	409.580041	1225.71829	3.8555	0.0015791	1.5158	0.00062082	5.3713	0.0022	409.58047861624766	90.847	0.60861	91.828	91.493	92.102	0.98157					33	18	2	0	0	0	0.88278	2	38243	38184;38243		3.3196	1.99	1	1360400			34961	3010	17243	17320	40861;40862	40862					0.11446242219517444
TRIQLSWLLP	10	Unmodified	_TRIQLSWLLP_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	409.5817748904228	3	409.580041	1225.71829	3.9716	0.0016267	0.60816	0.00024909	4.5797	0.0018758	409.58021769806885	90.194	0.59835	91.599	91.304	91.903	1.4045					36	18	2	0	0	0	0.88278	2	38052	37939;38052		3.3196	1.0369	1	1282300			34962	3010	17243	17320	40863;40864	40864					0.11446242219517444
TRITLEKLSF	10	Unmodified	_TRITLEKLSF_					0	0	0		tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3580200076103	2	604.355888	1206.69722	2.8873	0.001745	0.90535	0.00054716	3.7927	0.0022921	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	0.89803	1	35961	35961		1.4819	0	1	89814000			34963	16099	17244	17321	40865	40865					0.10214232119983535
TRITLEKLSF	10	Unmodified	_TRITLEKLSF_					0	0	0		tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	tr|A0A553SG86|A0A553SG86_NIACIProteinxpaCOS=NialliacirculansOX=1397GN=CEQ21_10320PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3575927615166	2	604.355888	1206.69722	3.1699	0.0019157	0.11128	6.7254E-05	3.2812	0.001983	604.3561534507077	85.185	0.9964	86.782	86.401	87.397	1.5962					136	40	5	0	0	0	0.89803	1	35946	35946		1.4819	0	1	92723000			34964	16099	17244	17321	40866	40866					0.10214232119983535
TRKKAISS	8	Unmodified	_TRKKAISS_					0	0	0			REV__nc|ENSG00000158201|Q8WU67-2|ABHD3	REV__nc|ENSG00000158201|Q8WU67-2|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	445.7742797732353	2	445.774534	889.534515	2.1318	0.0009503	-2.708	-0.0012072	-0.57623	-0.00025687	445.7732862769235	89.509	0.47329	89.509	89.274	89.747	0					40	14	4	0	0	0	0.88587	1	37419	37419		5.2307	0	1	5589400	+		34965	14469	17245	17322	40867	40867					0.0853289350865225
TRKLTTLT	8	Unmodified	_TRKLTTLT_					0	0	0			REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5735351443291	1	933.572757	932.565481	3.4314	0.0032034	-0.65586	-0.00061229	2.7755	0.0025911	933.5717021429236	107.71	0.19872	107.87	107.73	107.93	0.15781					31	10	4	0	0	0	0.89198	1	46438	46438		0	0	1	426540000	+		34966	13556	17246	17323	40868	40868					0.09650046822878267
TRKLTTLT	8	Unmodified	_TRKLTTLT_					0	0	0			REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	933.5746948122978	1	933.572757	932.565481	3.4437	0.003215	-0.20772	-0.00019392	3.236	0.003021	933.5722391599319	106.1	0.14078	106.26	106.19	106.33	0.16174					23	7	4	0	0	0	0.89198	1	45284	45284		0	0	1	127840000	+		34967	13556	17246	17323	40869	40869					0.09650046822878267
TRKLTTLT	8	Unmodified	_TRKLTTLT_					0	0	0			REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	REV__ENST00000508814.5_1_5:81474325-81572030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2913085818291	2	467.290017	932.565481	3.5632	0.0016651	-1.7471	-0.00081642	1.8161	0.00084865	467.2890738364612	107.68	0.20221	107.84	107.74	107.94	0.15795					27	10	4	0	0	0	0.89198	1	46377	46377		0	0	1	512390000	+		34968	13556	17246	17323	40870	40870					0.09650046822878267
TRKLWMKLKR	10	Unmodified	_TRKLWMKLKR_					0	0	0			REV__nc|ENSG00000163867|O95789-5|ZMYM6	REV__nc|ENSG00000163867|O95789-5|ZMYM6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	681.2302734255791	2	680.423916	1358.83328	2.4212	0.0016474	-1.1815	-0.00080393	1.2397	0.0008435	680.4235311216228	90.994	0.34472	90.994	90.843	91.188	0					16	10	2	0	0	0	0.1256	1	37986	37986		0.40072	0	1	326210	+		34969	10702	17247	17324	40871	40871					0.16821648149630164
TRKLWMKLKR	10	Unmodified	_TRKLWMKLKR_					0	0	0			REV__nc|ENSG00000163867|O95789-5|ZMYM6	REV__nc|ENSG00000163867|O95789-5|ZMYM6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	680.423916	1358.83328	2.5728	0.0017506	0.77447	0.00052697	3.3473	0.0022776	680.4253052759594	90.825	0.22678	91.034	90.932	91.159	0.20903	0.019792	0.0022186	NaN	0.40072	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487280	+		34970	10702	17247	17324							0.16821648149630164
TRKRKKHGV	9	Unmodified	_TRKRKKHGV_					0	0	0			REV__ENSG00000109111|ENST00000314616|SUPT6H	REV__ENSG00000109111|ENST00000314616|SUPT6H	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1007873415947	3	370.571991	1108.69414	1.5083	0.00055893	-2.6334	-0.00097587	-1.1251	-0.00041694	370.57081894462476	85.289	0.26498	86.448	86.303	86.568	1.159					13	9	2	0	0	0	0.11946	1	35818	35818		0.26902	0.26902	1	1888100	+		34971	9268	17248	17325	40872	40872					0.14414446576506634
TRLENEIATYR	11	Unmodified	_TRLENEIATYR_					0	0	0		ENSG00000171360|ENST00000246646|KRT38;CON__O76015	ENSG00000171360|ENST00000246646|KRT38	ENSG00000171360|ENST00000246646|KRT38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	455.9091369509697	3	455.908886	1364.70483	1.4303	0.00065207	-0.84527	-0.00038537	0.585	0.00026671	455.90912015357986	26.325	0.3125	27.596	27.434	27.747	1.2715					11	9	2	0	0	0	0.96683	1	11026	11026		2.9264	0	1	302690		+	34972	331	17249	17326	40873	40873					0.037063396496023415
TRLITFRK	8	Unmodified	_TRLITFRK_					0	0	0		nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;ENSG00000130529|ENST00000252826|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.5553161501884	3	345.553826	1033.63965	1.07	0.00036974	3.568	0.0012329	4.638	0.0016027	345.5548034116385	40.426	0.92553	41.737	41.269	42.195	1.3102					64	29	3	0	0	0	0.88942	1	16962	16962		2.9952	0.90923	1	2395300			34973	2439	17250	17327	40874	40874					0.12417434705071173
TRLITFRK	8	Unmodified	_TRLITFRK_					0	0	0		nc|ENSG00000130529|Q8TD43-2|TRPM4;nc|ENSG00000130529|Q8TD43-3|TRPM4;ENSG00000130529|ENST00000252826|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	nc|ENSG00000130529|Q8TD43-2|TRPM4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	345.553826	1033.63965	1.4066	0.00048606	4.0094	0.0013854	5.416	0.0018715	345.5550580529687	40.077	0.73825	41.94	41.433	42.171	1.8624	0.10151	0.00022657	NaN	2.9952	60	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2774400			34974	2439	17250	17327							0.12417434705071173
TRLKKLAE	8	Unmodified	_TRLKKLAE_					0	0	0			REV__APOL3|p.C184Lfs*68|1|0.06|ENSG00000128284|chr22:36141858-36141859|-/A|frameshift_variant	REV__APOL3|p.C184Lfs*68|1|0.06|ENSG00000128284|chr22:36141858-36141859|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.2067138552666	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.11	1	105.11	104.61	105.61	0								0	0	0	1.0178	1	44541	44541		0.40072	0	1		+		34975	8131	17251	17328	40875	40875					0.11662039576845018
TRLLALAW	8	Unmodified	_TRLLALAW_					0	0	0			REV__ENSG00000183421|ENST00000332512|RIPK4	REV__ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2913085818291	2	472.28982	942.565087	2.653	0.001253	-0.46716	-0.00022064	2.1859	0.0010324	472.2895451377392	60.018	0.45121	61.437	61.146	61.597	1.4196					51	14	5	0	0	0	0.59872	2	25119	25119;25168		40.449	0	1	41920000	+		34976	11391	17252	17329	40876;40877	40876					0.09150671893689832
TRLLALAW	8	Unmodified	_TRLLALAW_					0	0	0			REV__ENSG00000183421|ENST00000332512|RIPK4	REV__ENSG00000183421|ENST00000332512|RIPK4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2913696169853	2	472.28982	942.565087	3.0867	0.0014578	-1.0611	-0.00050115	2.0256	0.00095665	472.2892111538219	59.515	0.63237	61.484	61.225	61.858	1.969					51	20	5	0	0	0	0.59872	2	24934	24934;24985		40.449	0	1	42271000	+		34977	11391	17252	17329	40878;40879	40878					0.09150671893689832
TRLLLLKLLNP	11	Unmodified	_TRLLLLKLLNP_					0	0	0		ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1293.865161120892	1	1293.86167	1292.85439	2.7364	0.0035406	-2.1666	-0.0028033	0.56982	0.00073727	1293.861608802062	107.99	0.082329	108.15	108.11	108.19	0.15781					16	9	3	0	0	0	1.0395	1	46592	46592		0.30703	0	1	61011000			34978	6986	17253	17330	40880	40880					0.21967936730175097
TRLLLLKLLNP	11	Unmodified	_TRLLLLKLLNP_					0	0	0		ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	ENST00000503171.5_1_4:106317436-106374979:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1293.86167	1292.85439	2.1011	0.0027185	-0.064587	-8.3567E-05	2.0365	0.002635	1293.862627681218	107.98	0.079124	108.14	108.09	108.17	0.15796	-0.0054976	0.00049191	NaN	0.30703	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43954000			34979	6986	17253	17330							0.21967936730175097
TRLLRLKIV	9	Unmodified	_TRLLRLKIV_					0	0	0			REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614318728447	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.29	1	108.34	107.84	108.84	0.050644								0	0	0	0.42693	1	46524	46524		0.26902	0	1		+		34980	14009	17254	17331	40881	40881					0.20914842698675784
TRLLRLKIV	9	Unmodified	_TRLLRLKIV_					0	0	0			REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613708376884	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.39	1	108.44	107.94	108.94	0.050644								0	0	0	0.42693	1	46587	46587		0.26902	0	1		+		34981	14009	17254	17331	40882	40882					0.20914842698675784
TRLLRLKIV	9	Unmodified	_TRLLRLKIV_					0	0	0			REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614623904228	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.49	1	108.54	108.04	109.04	0.050644								0	0	0	0.42693	1	46645	46645		0.26902	0	1		+		34982	14009	17254	17331	40883	40883					0.20914842698675784
TRLLRLKIV	9	Unmodified	_TRLLRLKIV_					0	0	0			REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2611877322197	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.61	1	108.66	108.16	109.16	0.050644								0	0	0	0.42693	1	46717	46717		0.26902	0	1		+		34983	14009	17254	17331	40884	40884					0.20914842698675784
TRLLRLKIV	9	Unmodified	_TRLLRLKIV_					0	0	0			REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	REV__ENST00000584500.1_1_17:62503303-62504279:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2627746462822	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.63	1	109.67	109.17	110.17	0.048843								0	0	0	0.42693	1	47299	47299		0.26902	0	1		+		34984	14009	17254	17331	40885	40885					0.20914842698675784
TRLNRQIKRK	10	Unmodified	_TRLNRQIKRK_					0	0	0			REV__ENSG00000145703|ENST00000274364|IQGAP2	REV__ENSG00000145703|ENST00000274364|IQGAP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2840759158134	3	438.280988	1311.82114	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.906	1	65.233	64.733	65.733	0.32689								0	0	0	0.66227	1	27185	27185		0.62683	0	1		+		34985	10281	17255	17332	40886	40886					0.17769747730812924
TRLRLQKRGTG	11	Unmodified	_TRLRLQKRGTG_					0	0	0		MARK4-CKM|1|fusion;ENSG00000104879|ENST00000221476|CKM	MARK4-CKM|1|fusion	MARK4-CKM|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.3959228396416	2	643.394202	1284.77385	3.0709	0.0019758	2.0065	0.001291	5.0774	0.0032668	643.3938764984363	105.88	0.077202	106.05	106	106.07	0.16679					9	3	3	0	0	0	1.0282	1	45156	45156		2.086	0	1	7906900			34986	1485	17256	17333	40887	40887					0.1428546845982055
TRLRLQKRGTG	11	Unmodified	_TRLRLQKRGTG_					0	0	0		MARK4-CKM|1|fusion;ENSG00000104879|ENST00000221476|CKM	MARK4-CKM|1|fusion	MARK4-CKM|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	643.394202	1284.77385	2.7465	0.0017671	-2.5624	-0.0016487	0.18408	0.00011844	643.3905949777784	105.9	0.079666	106.06	106	106.08	0.15859	0.0053154	-0.0044163	NaN	2.086	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11556000			34987	1485	17256	17333							0.1428546845982055
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2626220583916	2	428.261594	854.508634	1.042	0.00044623	0.3961	0.00016963	1.4381	0.00061587	428.26172948888245	73.476	0.98903	73.476	73.184	74.173	0					91	31	5	0	0	0	0.8909	1	30532	30532		2.0598	0	1	296800000			34988	5525	17257	17334	40888	40888					0.07556044057048439
TRLVPRGG	8	Unmodified	_TRLVPRGG_					0	0	0		ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	ENST00000218104.5_1_X:152990328-152990616:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.2632324099541	2	428.261594	854.508634	2.6661	0.0011418	0.84244	0.00036078	3.5086	0.0015026	428.26184252814	72.358	0.67717	73.688	73.391	74.069	1.3297					77	21	5	0	0	0	0.89178	1	30396	30396		0.69038	0	1	103450000			34989	5525	17257	17334	40889	40889					0.07556044057048439
TRNIPVTR	8	Unmodified	_TRNIPVTR_					0	0	0		ENST00000590614.5_1_19:44598638-44600534:+|nuORF;ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7862731814384	2	478.785433	955.556313	2.3947	0.0011466	-0.44788	-0.00021444	1.9469	0.00093213	478.7849896885472	71.324	0.32217	71.647	71.494	71.816	0.32359					17	9	2	0	0	0	0.8873	1	29883	29883		4.3292	0	1	976680			34990	7476	17258	17335	40890	40890					0.0767569825721921
TRNIPVTR	8	Unmodified	_TRNIPVTR_					0	0	0		ENST00000590614.5_1_19:44598638-44600534:+|nuORF;ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7865478396416	2	478.785433	955.556313	3.4186	0.0016368	-0.83721	-0.00040084	2.5814	0.0012359	478.7848727867774	74.753	0.46461	75.078	74.802	75.267	0.32463					45	14	4	0	0	0	0.88846	1	31219	31219		3.5965	1.019	1	9049000			34991	7476	17258	17335	40891	40891					0.0767569825721921
TRNIPVTR	8	Unmodified	_TRNIPVTR_					0	0	0		ENST00000590614.5_1_19:44598638-44600534:+|nuORF;ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	478.785433	955.556313	1.9722	0.00094426	-0.71888	-0.00034419	1.2533	0.00060007	478.78500102425073	71.612	0.28648	71.612	71.446	71.732	0	-0.12473	-0.00020669	NaN	4.3292	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	874690			34992	7476	17258	17335							0.0767569825721921
TRNIPVTR	8	Unmodified	_TRNIPVTR_					0	0	0		ENST00000590614.5_1_19:44598638-44600534:+|nuORF;ENST00000589680.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	ENST00000590614.5_1_19:44598638-44600534:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	478.785433	955.556313	2.3521	0.0011262	-0.038291	-1.8333E-05	2.3138	0.0011078	478.7856191001966	70.112	0.35329	71.95	71.751	72.104	1.8378	0.21378	0.00044502	NaN	4.3292	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	463830			34993	7476	17258	17335							0.0767569825721921
TRPKRQRWPV	10	Unmodified	_TRPKRQRWPV_					0	0	0			REV__ENST00000376714.7_1_13:96705526-96705706:-|nuORF	REV__ENST00000376714.7_1_13:96705526-96705706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	331.6983520388603	4	331.699369	1322.76837	1.0665	0.00035376	-3.5615	-0.0011813	-2.495	-0.00082759	331.6981181332035	39.701	0.39741	40.014	39.767	40.164	0.31263					37	12	4	0	0	0	0.89803	1	16655	16655		1.5923	0.89462	1	3102900	+		34994	12724	17259	17336	40892	40892					0.11989789668018602
TRQIDSVTE	9	Unmodified	_TRQIDSVTE_					0	0	0		tr|A0A553SIJ1|A0A553SIJ1_NIACILXGdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14925PE=3SV=1	tr|A0A553SIJ1|A0A553SIJ1_NIACILXGdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14925PE=3SV=1	tr|A0A553SIJ1|A0A553SIJ1_NIACILXGdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_14925PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1822997927666	3	350.180494	1047.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.721	1	46.05	45.55	46.55	0.32899								0	0	0	0.42693	1	19192	19192		2.4985	0	1				34995	16203	17260	17337	40893	40893					-0.0022064314998715417
TRQIVIALFLH	11	Unmodified	_TRQIVIALFLH_					0	0	0			REV__ENST00000316059.6_1_11:58352348-58378460:+|nuORF	REV__ENST00000316059.6_1_11:58352348-58378460:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.4531432986259	4	328.454037	1309.78704	-0.86479	-0.00028404	-1.9324	-0.0006347	-2.7972	-0.00091875	328.4534033655598	37.092	0.48013	38.376	38.111	38.591	1.284					68	39	2	0	0	0	1.0254	1	15579	15579		2.2527	1.143	1	17865000	+		34996	12386	17261	17338	40894	40894					0.14453906519202064
TRQIVIALFLH	11	Unmodified	_TRQIVIALFLH_					0	0	0			REV__ENST00000316059.6_1_11:58352348-58378460:+|nuORF	REV__ENST00000316059.6_1_11:58352348-58378460:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	328.2021362185478	4	328.454037	1309.78704	-0.86479	-0.00028404	-1.9324	-0.0006347	-2.7972	-0.00091875	328.4534033655598	37.092	0.48013	38.376	38.111	38.591	1.284					68	39	2	0	0	0	0.14606	1	15618	15618		4.1166	1.6818	1	17865000	+		34997	12386	17261	17338	40895	40895					0.14453906519202064
TRQKKRHR	8	Unmodified	_TRQKKRHR_					0	0	0		ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24	ENSG00000008838|ENST00000394128|MED24	ENSG00000008838|ENST00000394128|MED24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1109.683154284954	1	1109.67627	1108.66899	3.715	0.0041224	1.7934	0.0019901	5.5084	0.0061126	1109.6781499066503	107.52	0.13702	107.57	107.52	107.66	0.052452					15	6	3	0	0	0	0.89178	1	46016	46016		0.69038	0	1	40636000			34998	533	17262	17339	40896	40896					0.11900391773929186
TRQKKRHR	8	Unmodified	_TRQKKRHR_					0	0	0		ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24	ENSG00000008838|ENST00000394128|MED24	ENSG00000008838|ENST00000394128|MED24	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1109.67627	1108.66899	1.3387	0.0014855	3.7047	0.004111	5.0434	0.0055966	1109.6804515713159	107.57	0.15646	107.57	107.49	107.65	0	-0.045404	0.0020004	NaN	0.69038	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28034000			34999	533	17262	17339							0.11900391773929186
TRQKKRHR	8	Unmodified	_TRQKKRHR_					0	0	0		ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24	ENSG00000008838|ENST00000394128|MED24	ENSG00000008838|ENST00000394128|MED24	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1109.67627	1108.66899	2.7854	0.0030909	1.5449	0.0017143	4.3303	0.0048052	1109.6776437682736	107.51	0.17332	107.67	107.56	107.73	0.15781	0.048298	-0.0003963	NaN	0.69038	27	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	261970000			35000	533	17262	17339							0.11900391773929186
TRQKKRHR	8	Unmodified	_TRQKKRHR_					0	0	0		ENSG00000008838|ENST00000394128|MED24;nc|ENSG00000008838|O75448-2|MED24	ENSG00000008838|ENST00000394128|MED24	ENSG00000008838|ENST00000394128|MED24	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1109.67627	1108.66899	3.2752	0.0036344	0.81475	0.00090411	4.09	0.0045385	1109.6766398980817	107.51	0.17638	107.67	107.54	107.72	0.15795	0.047929	-0.0012065	NaN	0.69038	22	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120280000			35001	533	17262	17339							0.11900391773929186
TRQRRLLHRKK	11	Unmodified	_TRQRRLLHRKK_					0	0	0			REV__ENSG00000178605|ENST00000326153|GTPBP6	REV__ENSG00000178605|ENST00000326153|GTPBP6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1025573611259	4	373.741834	1490.93823	-0.13026	-4.8684E-05	-0.49361	-0.00018448	-0.62387	-0.00023317	373.74162655394264	62.34	0.12554	62.34	62.274	62.399	0					5	3	2	0	0	0	0.14606	1	25994	25994		0	0	1	137220	+		35002	11250	17263	17340	40897	40897					0.21239905670427106
TRRALLRPPD	10	Unmodified	_TRRALLRPPD_					0	0	0			REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8577758669853	2	597.856921	1193.69929	2.5309	0.0015131	-1.4694	-0.00087849	1.0615	0.00063465	597.8563776529165	91.115	0.40729	91.115	90.874	91.281	0					22	12	3	0	0	0	0.89803	1	38086	38086		1.1933	0	1	780890	+		35003	13006	17264	17341	40898	40898					0.11018705648439209
TRRALLRPPD	10	Unmodified	_TRRALLRPPD_					0	0	0			REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	597.856921	1193.69929	2.5309	0.0015131	-1.4694	-0.00087849	1.0615	0.00063465	597.8563776529165	91.115	0.40729	91.115	90.874	91.281	0	-0.10866	9.4491E-05	NaN	1.1933	22	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780890	+		35004	13006	17264	17341							0.11018705648439209
TRRALLRPPD	10	Unmodified	_TRRALLRPPD_					0	0	0			REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	REV__ENST00000427908.6_1_5:176737530-176738842:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	597.856921	1193.69929	4.5014	0.0026912	-2.4819	-0.0014838	2.0194	0.0012073	597.8556414282632	90.335	0.25841	91.317	91.14	91.398	0.98157	0.093552	-0.0011162	NaN	1.1933	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	327110	+		35005	13006	17264	17341							0.11018705648439209
TRRATPNAE	9	Unmodified	_TRRATPNAE_					0	0	0			REV__ENSG00000004399|ENST00000324093|PLXND1	REV__ENSG00000004399|ENST00000324093|PLXND1	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2708007693291	3	339.180828	1014.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2697	1	6.2697	5.7697	6.7697	0								0	0	0	0.42693	1	2575	2575		0	0	1		+		35006	8484	17265	17342	40899	40899					0.013976160095467094
TRRATPNAE	9	Unmodified	_TRRATPNAE_					0	0	0			REV__ENSG00000004399|ENST00000324093|PLXND1	REV__ENSG00000004399|ENST00000324093|PLXND1	MSMS	GG20161007_CRH_Patient100_A02_02	2	339.1809265017509	3	339.180828	1014.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.83	110.33	111.33	0.047043								0	0	0	0.42693	1	47778	47778		0	0	1		+		35007	8484	17265	17342	40900	40900					0.013976160095467094
TRRCAHRW	8	Unmodified	_TRRCAHRW_					0	0	0			REV__ENST00000589786.5_1_19:34303872-34304274:+|nuORF	REV__ENST00000589786.5_1_19:34303872-34304274:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2535278201103	3	362.522643	1084.5461	1.3995	0.00050735	0.24515	8.8872E-05	1.6447	0.00059623	362.52290195941487	67.652	0.21719	69.522	69.394	69.611	1.87					9	6	2	0	0	0	2.3239	1	28419	28419		0.45834	0	1	302800	+		35008	14058	17266	17343	40901	40901					0.007208120509858418
TRRHRKQECRQ	11	Unmodified	_TRRHRKQECRQ_					0	0	0		ENST00000216281.12_1_14:102547104-102547248:-|nuORF	ENST00000216281.12_1_14:102547104-102547248:-|nuORF	ENST00000216281.12_1_14:102547104-102547248:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1497.804736316204	1	1497.79277	1496.78549	-0.46573	-0.00069757	3.6775	0.0055082	3.2118	0.0048106	1497.802374306409	26.396	0.30202	28.143	28.006	28.308	1.747					15	9	2	0	0	0	1.0396	1	11050	11050		0.26902	0	1	7524700			35009	5520	17267	17344	40902	40902					0.05697342211533396
TRRPKLQPEP	10	Unmodified	_TRRPKLQPEP_					0	0	0		ENST00000473014.1_1_1:43779426-43783109:+|nuORF;ENSG00000066056|ENST00000372476|TIE1	ENST00000473014.1_1_1:43779426-43783109:+|nuORF	ENST00000473014.1_1_1:43779426-43783109:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3569213747978	2	611.356754	1220.69895	1.6593	0.0010144	-0.21707	-0.00013271	1.4423	0.00088174	611.3563135438266	79.244	2.9605	79.545	78.665	81.626	0.30046					268	94	5	0	0	0	0.89803	1	33162	33162		1.3295	0.13619	1	10904000			35010	798	17268	17345	40903	40903					0.09743285928584555
TRRRAIHR	8	Unmodified	_TRRRAIHR_					0	0	0			REV__ENST00000528220.1_1_11:65488056-65488251:-|nuORF	REV__ENST00000528220.1_1_11:65488056-65488251:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1065.654223620892	1	1065.65005	1064.64278	3.7944	0.0040435	-0.035508	-3.7839E-05	3.7589	0.0040057	1065.649761207986	107.55	0.1694	107.71	107.6	107.77	0.15795					27	8	4	0	0	0	0.89198	1	46207	46207		0	0	1	143740000	+		35011	12350	17269	17346	40904	40904					0.11304122602427924
TRRRCWRTWRR	11	Unmodified	_TRRRCWRTWRR_					0	0	0			REV__TCEA1|p.D3Efs*28|1|0.05|ENSG00000187735|chr8:54022117-54022118|-/GACGT|frameshift_variant	REV__TCEA1|p.D3Efs*28|1|0.05|ENSG00000187735|chr8:54022117-54022118|-/GACGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7175170779228	3	544.967409	1631.8804	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.281	1	23.458	22.958	23.958	1.177								0	0	0	0.63775	1	9312	9312		0.45452	0	1		+		35012	13631	17270	17347	40905	40905					0.08973320473342028
TRRRRRRPLFF	11	Unmodified	_TRRRRRRPLFF_					0	0	0			REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	REV__ENST00000317613.10_1_9:116303752-116304061:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.4951049685478	4	390.991918	1559.93856	1.1283	0.00044117	3.1377	0.0012268	4.266	0.001668	391.24479000667264	43.297	0.086563	44.651	44.59	44.677	1.3536					4	2	2	0	0	0	0.14606	1	18130	18130		0.073264	0.073264	1	325930	+		35013	12394	17271	17348	40906	40906					0.1809932539026704
TRRVRPPL	8	Unmodified	_TRRVRPPL_					0	0	0		nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.8181640505791	2	497.817067	993.619582	3.369	0.0016772	-2.8541	-0.0014208	0.51493	0.00025634	497.81594117760557	106.12	0.12302	106.18	106.12	106.25	0.05455					11	5	3	0	0	0	0.88587	1	45161	45161		5.2307	0	1	20064000			35014	7816	17272	17349	40907	40907					0.1225168376511192
TRRVRPPL	8	Unmodified	_TRRVRPPL_					0	0	0		nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.8186828494072	2	497.817067	993.619582	3.1224	0.0015544	-0.65267	-0.00032491	2.4697	0.0012295	497.8167699370563	106.12	0.15733	106.27	106.18	106.33	0.15781					23	8	4	0	0	0	0.89051	1	45352	45352		2.3027	0	1	78851000			35015	7816	17272	17349	40908	40908					0.1225168376511192
TRRVRPPL	8	Unmodified	_TRRVRPPL_					0	0	0		nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8182250857353	2	497.817067	993.619582	3.1338	0.00156	-1.3909	-0.0006924	1.7429	0.00086764	497.8165598535525	106.07	0.14006	106.23	106.17	106.31	0.16174					22	7	4	0	0	0	0.89176	1	45280	45280		0.79363	0	1	87014000			35016	7816	17272	17349	40909	40909					0.1225168376511192
TRRVRPPL	8	Unmodified	_TRRVRPPL_					0	0	0		nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	nc|ENSG00000027869|Q9NP31-2|SH2D2A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	497.817067	993.619582	0.99867	0.00049715	0.47826	0.00023808	1.4769	0.00073524	497.81785047081934	106.17	0.11543	106.17	106.11	106.23	0	-0.044129	0.0014052	NaN	5.2307	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12074000			35017	7816	17272	17349							0.1225168376511192
TRSGIMLTT	9	Unmodified	_TRSGIMLTT_					0	0	0			REV__ENSG00000094755|ENST00000265294|GABRP	REV__ENSG00000094755|ENST00000265294|GABRP	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.1799194216728	3	327.179548	978.516816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.445	1	97.445	96.945	97.945	0								0	0	0	0.42693	1	40739	40739		2.2828	0.19677	1		+		35018	8921	17273	17350	40910	40910					0.026698101914689687
TRSGIMLTT	9	Unmodified	_TRSGIMLTT_					0	0	0			REV__ENSG00000094755|ENST00000265294|GABRP	REV__ENSG00000094755|ENST00000265294|GABRP	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.1804382205009	3	327.179548	978.516816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.396	1	97.487	96.987	97.987	0.090881								0	0	0	0.42693	1	40753	40753		2.2828	0	1		+		35019	8921	17273	17350	40911	40911					0.026698101914689687
TRSLEEKSREL	11	Unmodified	_TRSLEEKSREL_					0	0	0			REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	449.9124023318291	3	449.912407	1346.71539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.54	1	4.54	4.04	5.04	0								0	0	0	0.63775	1	1865	1865		0	0	1		+		35020	10247	17274	17351	40912	40912					0.05590322304010442
TRSLEEKSREL	11	Unmodified	_TRSLEEKSREL_					0	0	0			REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9120361208916	3	449.912407	1346.71539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1364	1	3.76	3.26	4.26	0.62362								0	0	0	0.63775	1	1294	1294		0	0	1		+		35021	10247	17274	17351	40913	40913					0.05590322304010442
TRSLEEKSREL	11	Unmodified	_TRSLEEKSREL_					0	0	0			REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	REV__ENST00000461825.1_1_2:197583226-197584436:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9120971560478	3	449.912407	1346.71539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3131	1	3.0615	2.5615	3.5615	0.7484								0	0	0	0.63775	1	960	960		0	0	1		+		35022	10247	17274	17351	40914	40914					0.05590322304010442
TRSPLVKPP	9	Unmodified	_TRSPLVKPP_					0	0	0		ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	ENSG00000186564|ENST00000334793|FOXD2	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2082702517509	3	332.206315	993.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.842	1	94.966	94.466	95.466	0.12331								0	0	0	0.42693	1	39689	39689		1.1933	0	1				35023	4795	17275	17352	40915	40915					0.10006039576853709
TRSRRRRRRRR	11	Unmodified	_TRSRRRRRRRR_					0	0	0			REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF	REV__ENST00000586027.5_1_19:14602515-14606910:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	806.5068847537041	2	806.507412	1611.00027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.866	1	98.123	97.623	98.623	0.25636								0	0	0	0.63775	1	41174	41174		0	0	1		+		35024	14027	17276	17353	40916	40916					0.2192106986210547
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2530090212822	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.98	1	112.98	112.48	113.48	0								0	0	0	1.0178	1	48827	48827		2.3027	0	1		+		35025	12948	17277	17354	40917	40917					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2524597048759	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.11	1	113.11	112.61	113.61	0								0	0	0	1.0178	1	48879	48879		2.3027	0	1		+		35026	12948	17277	17354	40918	40918					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2525817751884	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.41	1	113.41	112.91	113.91	0								0	0	0	1.0178	1	48998	48998		2.3027	0	1		+		35027	12948	17277	17354	40919	40919					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2521850466728	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.6	1	113.6	113.1	114.1	0								0	0	0	1.0178	1	49074	49074		2.3027	0	1		+		35028	12948	17277	17354	40920	40920					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2528564333916	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.73	1	113.73	113.23	114.23	0								0	0	0	1.0178	1	49126	49126		2.3027	0	1		+		35029	12948	17277	17354	40921	40921					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2526122927666	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.26	1	114.26	113.76	114.76	0								0	0	0	1.0178	1	49337	49337		2.3027	0	1		+		35030	12948	17277	17354	40922	40922					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2523376345634	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.47	1	115.47	114.97	115.97	0								0	0	0	1.0178	1	49831	49831		2.3027	0	1		+		35031	12948	17277	17354	40923	40923					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2530700564384	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.85	1	115.85	115.35	116.35	0								0	0	0	1.0178	1	49985	49985		2.3027	0	1		+		35032	12948	17277	17354	40924	40924					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2535888552666	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.97	1	115.97	115.47	116.47	0								0	0	0	1.0178	1	50036	50036		2.3027	0	1		+		35033	12948	17277	17354	40925	40925					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2531616091728	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.5	1	117.5	117	118	0								0	0	0	1.0178	1	50660	50660		2.3027	0	1		+		35034	12948	17277	17354	40926	40926					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2520324587822	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.8	1	117.8	117.3	118.3	0								0	0	0	1.0178	1	50778	50778		2.3027	0	1		+		35035	12948	17277	17354	40927	40927					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2520324587822	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.22	1	118.22	117.72	118.72	0								0	0	0	1.0178	1	50945	50945		2.3027	0	1		+		35036	12948	17277	17354	40928	40928					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2513915896416	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.51	1	118.51	118.01	119.01	0								0	0	0	1.0178	1	51063	51063		2.3027	0	1		+		35037	12948	17277	17354	40929	40929					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2524902224541	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.63	1	118.63	118.13	119.13	0								0	0	0	1.0178	1	51111	51111		2.3027	0	1		+		35038	12948	17277	17354	40930	40930					0.05943453677366506
TRTGRLAA	8	Unmodified	_TRTGRLAA_					0	0	0			REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	REV__ENST00000416516.2_2_3:36756997-36759611:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	423.2520934939384	2	423.251226	844.487899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.74	1	119.74	119.24	120.24	0								0	0	0	1.0178	1	51557	51557		2.3027	0	1		+		35039	12948	17277	17354	40931	40931					0.05943453677366506
TRTIRRKRWRR	11	Unmodified	_TRTIRRKRWRR_					0	0	0		ENST00000399933.7_1_9:6007594-6007651:-|nuORF	ENST00000399933.7_1_9:6007594-6007651:-|nuORF	ENST00000399933.7_1_9:6007594-6007651:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	792.9926025271416	2	792.99274	1583.97093	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.856	1	100.05	99.554	100.55	0.19767								0	0	0	0.63775	1	42031	42031		0	0	1				35040	6339	17278	17355	40932	40932					0.20230112793274202
TRVAAKGV	8	Unmodified	_TRVAAKGV_					0	0	0			REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	801.4952270388603	1	801.494113	800.486836	2.8958	0.002321	-1.3095	-0.0010496	1.5863	0.0012714	801.4927604773582	107.84	0.22852	108	107.86	108.09	0.15795					32	12	4	0	0	0	0.89176	1	46472	46472		0.79363	0	1	810380000	+		35041	13882	17279	17356	40933	40933					0.07861239308465429
TRVAAKGV	8	Unmodified	_TRVAAKGV_					0	0	0			REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	801.494113	800.486836	2.7559	0.0022088	-0.31107	-0.00024932	2.4448	0.0019595	801.4936351583096	107.89	0.20245	107.94	107.82	108.02	0.052452	-0.017953	-2.8034E-05	NaN	0.79363	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	408900000	+		35042	13882	17279	17356							0.07861239308465429
TRVAAKGV	8	Unmodified	_TRVAAKGV_					0	0	0			REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	801.494113	800.486836	2.7368	0.0021936	-0.53354	-0.00042763	2.2033	0.0017659	801.4934934193668	107.82	0.19899	107.98	107.9	108.1	0.15781	0.024328	-0.00020634	NaN	0.79363	33	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	657010000	+		35043	13882	17279	17356							0.07861239308465429
TRVAAKGV	8	Unmodified	_TRVAAKGV_					0	0	0			REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	REV__ENST00000558340.1_1_14:24761833-24765739:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	801.494113	800.486836	2.8958	0.002321	-1.3095	-0.0010496	1.5863	0.0012714	801.4927604773582	107.84	0.22852	108	107.86	108.09	0.15795	0.045794	-0.0008283	NaN	0.79363	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810380000	+		35044	13882	17279	17356							0.07861239308465429
TSDCECLF	8	Unmodified	_TSDCECLF_					0	0	0		ENST00000401578.2_1_6:80776237-80776996:-|nuORF;nc|ENSG00000107863|Q5T5U3-3|ARHGAP21;ENSG00000107863|ENST00000396432|ARHGAP21	ENST00000401578.2_1_6:80776237-80776996:-|nuORF	ENST00000401578.2_1_6:80776237-80776996:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1727783083916	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.328	1	35.153	34.653	35.653	1.8246								0	0	0	1.0178	1	13972	13972		0.79363	0	1				35045	1610	17280	17357	40934	40934					-0.1308575503933298
TSFIRRRTL	9	Unmodified	_TSFIRRRTL_					0	0	0			REV__ENSG00000111816|ENST00000606080|FRK	REV__ENSG00000111816|ENST00000606080|FRK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.3463622927666	2	575.346189	1148.67783	2.1732	0.0012503	-2.2245	-0.0012799	-0.051295	-2.9512E-05	575.3449557963314	82.936	0.58424	83.206	83.001	83.585	0.27029					37	18	3	0	0	0	0.84963	1	34716	34716		0.6015	0.076735	1	1159400	+		35046	9343	17281	17358	40935	40935					0.10943320619730912
TSGGVSET	8	Unmodified	_TSGGVSET_					0	0	0		tr|A0A7D6ZHR2|A0A7D6ZHR2_9CLOTDUF4489domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00430PE=4SV=1	tr|A0A7D6ZHR2|A0A7D6ZHR2_9CLOTDUF4489domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00430PE=4SV=1	tr|A0A7D6ZHR2|A0A7D6ZHR2_9CLOTDUF4489domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00430PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	369.1686279177666	2	369.169233	736.323913	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.97	1	105.14	104.64	105.64	0.16679								0	0	0	1.0178	1	44554	44554		0.69038	0	1				35047	17089	17282	17359	40936	40936					-0.054796086040482805
TSGRGSLK	8	Unmodified	_TSGRGSLK_					0	0	0		nc|ENSG00000075275|Q9NYQ6-2|CELSR1;CELSR1|p.D2180Pfs*74|1|0.14|ENSG00000075275|chr22:46389307-46389308|-/ACCCAAGACAGAAACCAGGG|frameshift_variant;nc|ENSG00000075275|Q9NYQ6|CELSR1;ENSG00000075275|ENST00000674500|CELSR1	nc|ENSG00000075275|Q9NYQ6-2|CELSR1	nc|ENSG00000075275|Q9NYQ6-2|CELSR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	403.2299987673759	2	403.229959	804.445365	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.14	1	107.3	106.8	107.8	0.16174								0	0	0	1.0178	1	45961	45961		0.6015	0	1				35048	146	17283	17360	40937	40937					0.035320585491263046
TSGSDSDE	8	Unmodified	_TSGSDSDE_					0	0	0		sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1;sp|P06725|PP65_HCMVA65kDaphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL83PE=1SV=2	sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1	sp|Q6SW59|PP65_HCMVM65kDaphosphoproteinOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL83PE=1SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.1430236697197	2	399.143412	796.272271	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.37	1	102.37	101.87	102.87	0								0	0	0	1.0178	1	42894	42894		2.5775	0	1				35049	15988	17284	17361	40938	40938					-0.13401397088603062
TSHLMRHQRM	10	Unmodified	_TSHLMRHQRM_					0	0	0		ENST00000432094.6_1_19:53960664-53960838:+|nuORF	ENST00000432094.6_1_19:53960664-53960838:+|nuORF	ENST00000432094.6_1_19:53960664-53960838:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	432.8859741091728	3	432.885252	1295.63393	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.759	1	24.41	23.91	24.91	1.6511								0	0	0	0.66254	1	9502	9502		0.15932	0	1				35050	6507	17285	17362	40939	40939					-0.0020635514053992665
TSHVAGTT	8	Unmodified	_TSHVAGTT_					0	0	0		chr7:6474284-6475302|388|35.24|0.0|21.75|-|2|TE_info:AluJb,AluJb_dup46949,Alu,SINE,donor,+,6475302,6475435|KDELR2,None|1	chr7:6474284-6475302|388|35.24|0.0|21.75|-|2|TE_info:AluJb,AluJb_dup46949,Alu,SINE,donor,+,6475302,6475435|KDELR2,None|1	chr7:6474284-6475302|388|35.24|0.0|21.75|-|2|TE_info:AluJb,AluJb_dup46949,Alu,SINE,donor,+,6475302,6475435|KDELR2,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	772.6172363162041	1	773.378808	772.371532	2.7393	0.0021185	-1.3896	-0.0010747	1.3497	0.0010438	773.3775609328144	104.64	0.11838	104.7	104.62	104.74	0.056801					19	5	5	0	0	0	2.3239	1	44132	44132		0.6015	0	1	1017599999.9999999			35051	285	17286	17363	40940	40940					-0.023759096132039303
TSHVSFSE	8	Unmodified	_TSHVSFSE_					0	0	0		nc|ENSG00000159147|Q9NYP3-2|DONSON;nc|ENSG00000159147|Q9NYP3-3|DONSON;ENSG00000159147|ENST00000303071|DONSON	nc|ENSG00000159147|Q9NYP3-2|DONSON	nc|ENSG00000159147|Q9NYP3-2|DONSON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	893.4033691287041	1	893.399938	892.392661	3.0979	0.0027677	-0.15554	-0.00013896	2.9424	0.0026287	893.4004933194659	104.78	0.091599	104.94	104.88	104.97	0.16679					16	4	5	0	0	0	0.88587	1	44410	44410		5.2307	0	1	214880000			35052	3517	17287	17364	40941	40941					-0.057839443043235406
TSKKGARR	8	Unmodified	_TSKKGARR_					0	0	0		tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	tr|A0A553SG27|A0A553SG27_NIACItRNAepoxyqueuosine(34)reductaseQueGOS=NialliacirculansOX=1397GN=queGPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2785827517509	2	452.277775	902.540997	3.1841	0.0014401	-0.95539	-0.0004321	2.2288	0.001008	452.27718964392153	74.711	0.49658	75.036	74.77	75.267	0.32464					48	15	4	0	0	0	0.89178	1	31276	31276		0.69038	0	1	15798000			35053	16093	17288	17365	40942	40942					0.08582831460034868
TSKKIVIT	8	Unmodified	_TSKKIVIT_					0	0	0		ENSG00000108179|ENST00000225174|PPIF;ENST00000448165.1_1_10:81113430-81113595:+|nuORF	ENSG00000108179|ENST00000225174|PPIF	ENSG00000108179|ENST00000225174|PPIF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1219970583916	2	445.289485	888.564418	3.2492	0.0014468	-1.1708	-0.00052135	2.0784	0.00092548	445.2885677745277	103.3	0.13064	103.36	103.24	103.37	0.059502					7	4	2	0	0	0	2.3239	1	43249	43249		0.6015	0	1	1552400			35054	1624	17289	17366	40943	40943					0.11567832453977189
TSKKRATR	8	Unmodified	_TSKKRATR_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	474.2916442751884	2	474.290882	946.567212	2.723	0.0012915	-0.79161	-0.00037545	1.9314	0.00091605	474.290475448423	77.524	0.53287	77.841	77.606	78.138	0.31653					45	16	4	0	0	0	0.89051	1	32422	32422		2.3027	1.6124	1	14565000			35055	1299	17290	17367	40944	40944					0.09179100631513393
TSKKRATR	8	Unmodified	_TSKKRATR_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	474.290882	946.567212	2.325	0.0011027	-0.83713	-0.00039704	1.4878	0.00070566	474.2904601729626	77.711	0.43461	77.711	77.47	77.905	0	-0.22029	-0.00052833	NaN	2.3027	42	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10899000			35056	1299	17290	17367							0.09179100631513393
TSKKRATR	8	Unmodified	_TSKKRATR_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	474.290882	946.567212	2.7247	0.0012923	0.4138	0.00019626	3.1385	0.0014885	474.29110179286886	76.704	0.43793	77.998	77.792	78.23	1.2938	0.066888	0.00065828	NaN	2.3027	33	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4820500			35057	1299	17290	17367							0.09179100631513393
TSKKRATR	8	Unmodified	_TSKKRATR_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;nc|ENSG00000100731|Q96RV3-2|PCNX1;ENST00000554879.5_1_14:71374480-71476401:+|nuORF;nc|ENSG00000100731|Q96RV3-3|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	nc|ENSG00000100731|Q96RV3-4|PCNX1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	474.290882	946.567212	2.9125	0.0013814	0.56968	0.00027019	3.4822	0.0016516	474.29113309329745	76.408	0.47771	78.175	77.909	78.386	1.7672	0.24365	0.00080615	NaN	2.3027	38	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5375100			35058	1299	17290	17367							0.09179100631513393
TSLEVAKQL	9	Unmodified	_TSLEVAKQL_					0	0	0		tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	988.5678588747978	1	988.567337	987.560061	3.4074	0.0033685	-4.0172	-0.0039713	-0.60975	-0.00060278	988.5644810503724	63.871	0.27634	65.799	65.643	65.919	1.928					17	8	3	0	0	0	0.1735	1	26802	26802		36.044	0	1	1889200			35059	16640	17291	17368	40945	40945					0.06578323240421469
TSLEVAKQL	9	Unmodified	_TSLEVAKQL_					0	0	0		tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	tr|A0A553ST71|A0A553ST71_NIACIOPTfamilyoligopeptidetransporterOS=NialliacirculansOX=1397GN=CEQ21_04365PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	988.567337	987.560061	4.4415	0.0043907	-4.6968	-0.0046431	-0.25523	-0.00025231	988.5634816722179	64.38	0.24374	65.788	65.679	65.923	1.4071	-0.0058914	-0.00034964	NaN	36.044	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2252800			35060	16640	17291	17368							0.06578323240421469
TSLLHRAVRK	10	Unmodified	_TSLLHRAVRK_					0	0	0		ENST00000511502.5_1_1:1563563-1565907:+|nuORF	ENST00000511502.5_1_1:1563563-1565907:+|nuORF	ENST00000511502.5_1_1:1563563-1565907:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	590.8677245974541	2	590.867289	1179.72002	2.5245	0.0014916	-1.357	-0.00080179	1.1675	0.00068983	590.8664019291784	90.331	0.68983	90.541	90.242	90.932	0.20904					79	21	5	0	0	0	0.89803	1	37768	37768		1.4819	0	1	65375000			35061	7034	17292	17369	40946	40946					0.13735296028107769
TSLLIYIRKI	10	Unmodified	_TSLLIYIRKI_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	610.3932983279228	2	610.392273	1218.76999	2.6477	0.0016161	-0.70366	-0.00042951	1.944	0.0011866	610.3921239281657	105.95	0.14117	106.01	105.92	106.06	0.05455					16	6	3	0	0	0	0.89803	1	45035	45035		0.40072	0	1	115530000	+		35062	14316	17293	17370	40947	40947					0.16935985913414697
TSLLIYIRKI	10	Unmodified	_TSLLIYIRKI_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.3942748904228	2	610.392273	1218.76999	3.0638	0.0018701	0.50839	0.00031032	3.5722	0.0021804	610.3925234291798	107.38	0.19057	107.53	107.43	107.62	0.15781					44	9	6	0	0	0	0.89803	1	46145	46145		0.40072	0	1	284470000	+		35063	14316	17293	17370	40948	40948					0.16935985913414697
TSLLIYIRKI	10	Unmodified	_TSLLIYIRKI_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	610.392273	1218.76999	1.5577	0.0009508	1.9648	0.0011993	3.5225	0.0021501	610.3934366105343	107.44	0.16061	107.44	107.33	107.49	0	-0.048546	0.0012627	NaN	0.40072	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31616000	+		35064	14316	17293	17370							0.16935985913414697
TSLLIYIRKI	10	Unmodified	_TSLLIYIRKI_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	610.392273	1218.76999	2.6479	0.0016162	2.7895	0.0017027	5.4374	0.0033189	610.3943219415953	107.4	0.14587	107.45	107.36	107.5	0.052452	-0.038288	0.0022695	NaN	0.40072	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34716000	+		35065	14316	17293	17370							0.16935985913414697
TSLLIYIRKI	10	Unmodified	_TSLLIYIRKI_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|31|1|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	610.392273	1218.76999	3.2047	0.0019561	0.15605	9.5252E-05	3.3607	0.0020514	610.3922845972788	107.37	0.2108	107.53	107.41	107.62	0.15796	0.040579	-0.00094536	NaN	0.40072	40	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241530000	+		35066	14316	17293	17370							0.16935985913414697
TSLVLPGGPP	10	Unmodified	_TSLVLPGGPP_					0	0	0			REV__nc|ENSG00000188199|A6NNL0-2|NUTM2B	REV__nc|ENSG00000188199|A6NNL0-2|NUTM2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.2720214724541	2	469.271293	936.528032	1.5491	0.00072697	0.81982	0.00038472	2.369	0.0011117	469.27185986476997	24.608	0.33331	24.85	24.685	25.018	0.24251					21	10	3	0	0	0	0.73251	1	10304	10304		16.942	2.104	1	932560	+		35067	11434	17294	17371	40949	40949					0.05722955557291698
TSNKIVAM	8	Unmodified	_TSNKIVAM_					0	0	0			REV__ENST00000381140.8_3_13:28001325-28004053:+|nuORF	REV__ENST00000381140.8_3_13:28001325-28004053:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.2365295290947	2	432.236396	862.458238	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.14	1	104.3	103.8	104.8	0.16055								0	0	0	1.0178	1	44059	44059		0.79363	0	1		+		35068	12771	17295	17372	40950	40950					0.02150753617013379
TSPALALG	8	Unmodified	_TSPALALG_					0	0	0			REV__nc|ENSG00000124205|P14138-2|EDN3	REV__nc|ENSG00000124205|P14138-2|EDN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2117187380791	2	365.210704	728.406855	0.16028	5.8536E-05	3.5463	0.0012952	3.7066	0.0013537	365.21193960871096	22.481	0.26782	24.096	24.041	24.309	1.6158					19	8	3	0	0	0	0.89176	1	9385	9385		0.79363	0	1	828510	+		35069	9638	17296	17373	40951	40951					0.031787529146299676
TSPECVPP	8	Unmodified	_TSPECVPP_					0	0	0		nc|ENSG00000174038|Q5VYM1-3|SPATA31G1;nc|ENSG00000174038|Q5VYM1-2|SPATA31G1;ENSG00000174038|ENST00000312292|C9orf131	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	nc|ENSG00000174038|Q5VYM1-3|SPATA31G1	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.1955139040947	2	415.191654	828.368755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.198	1	90.407	89.907	90.907	0.20904								0	0	0	1.0178	1	37794	37794		0.79363	0	1				35070	4311	17297	17374	40952	40952					-0.052295010623538474
TSPGLAAL	8	Unmodified	_TSPGLAAL_					0	0	0			REV__ENST00000585044.5_1_17:80407631-80407799:-|nuORF	REV__ENST00000585044.5_1_17:80407631-80407799:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2111999392509	2	365.210704	728.406855	0.082758	3.0224E-05	2.2203	0.00081088	2.3031	0.0008411	365.21147456382187	22.688	0.52596	23.903	23.64	24.166	1.2145					25	16	3	0	0	0	0.88958	1	9488	9488		2.8892	0	1	1603700	+		35071	14014	17298	17375	40953	40953					0.03178752914618599
TSPGTLVVP	9	Unmodified	_TSPGTLVVP_					0	0	0			REV__ENST00000445816.5_1_15:44085996-44086706:+|nuORF	REV__ENST00000445816.5_1_15:44085996-44086706:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7520629763603	2	435.750193	869.485833	2.3162	0.0010093	2.4835	0.0010822	4.7997	0.0020915	435.7511277312858	63.625	0.67478	63.954	63.598	64.273	0.32899					54	21	3	0	0	0	0.70108	1	26701	26701		7.2892	0	1	5760800	+		35072	13105	17299	17376	40954	40954					0.0458698014890615
TSPIKLGPT	9	Unmodified	_TSPIKLGPT_					0	0	0			REV__nc|ENSG00000165480|Q8IX90-3|SKA3	REV__nc|ENSG00000165480|Q8IX90-3|SKA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5368224978447	3	305.183287	912.528032	0.15591	4.7582E-05	2.5737	0.00078546	2.7296	0.00083304	305.1838685085794	30.631	0.2804	32.446	32.262	32.543	1.8151					14	8	2	0	0	0	0.11916	1	12870	12870		2.2828	0	1	510690	+		35073	10781	17300	17377	40955	40955					0.06826955557301062
TSPIKLGPT	9	Unmodified	_TSPIKLGPT_					0	0	0			REV__nc|ENSG00000165480|Q8IX90-3|SKA3	REV__nc|ENSG00000165480|Q8IX90-3|SKA3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	305.183287	912.528032	-0.54301	-0.00016572	3.2755	0.00099962	2.7325	0.0008339	305.18424003986405	31.236	0.2197	32.517	32.375	32.594	1.2813	-0.030246	0.00060604	NaN	2.2828	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	562910	+		35074	10781	17300	17377							0.06826955557301062
TSQAGRTYIFT	11	Unmodified	_TSQAGRTYIFT_					0	0	0		chr10:43203420-43203722|310|15.35|0.18|6.39|-|0|RASGEF1A,None|1	chr10:43203420-43203722|310|15.35|0.18|6.39|-|0|RASGEF1A,None|1	chr10:43203420-43203722|310|15.35|0.18|6.39|-|0|RASGEF1A,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.3187744021416	2	622.817127	1243.6197	1.8708	0.0011652	-1.9264	-0.0011998	-0.055553	-3.46E-05	622.8157210047851	58.831	0.82402	60.8	60.401	61.225	1.969					58	26	3	0	0	0	0.90709	1	24574	24574		9.3831	0.63772	1	3180500			35075	177	17301	17378	40956	40956					0.007635941837861537
TSQVIRNLHVV	11	Unmodified	_TSQVIRNLHVV_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.5832397341728	3	422.582333	1264.72517	2.3578	0.00099636	-0.83312	-0.00035206	1.5247	0.0006443	422.5820980837992	81.569	1.164	81.849	81.11	82.274	0.2802					65	37	2	0	0	0	1.037	1	33873	33873		0.36667	0.037403	1	1152200			35076	433	17302	17379	40957	40957					0.1033955510006308
TSRAITKL	8	Unmodified	_TSRAITKL_					0	0	0		tr|A0A7D7A097|A0A7D7A097_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_23245PE=4SV=1	tr|A0A7D7A097|A0A7D7A097_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_23245PE=4SV=1	tr|A0A7D7A097|A0A7D7A097_9CLOTMarRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_23245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	889.5489990115166	1	889.546542	888.539266	3.1042	0.0027613	-0.50854	-0.00045237	2.5956	0.0023089	889.5456334216619	107.73	0.20406	107.89	107.77	107.98	0.15795					29	10	4	0	0	0	0.89198	2	46334	46334;46414		0	0	1	526860000			35077	17220	17303	17380	40958;40959	40958					0.09053777651399741
TSRLLLLLLLL	11	Unmodified	_TSRLLLLLLLL_					0	0	0		SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant;nc|ENSG00000129214|P04278-4|SHBG;nc|ENSG00000129214|P04278-3|SHBG;nc|ENSG00000129214|P04278-5|SHBG;ENSG00000129214|ENST00000380450|SHBG	SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant	SHBG|p.L175Afs*39|1|0.19|ENSG00000129214|chr17:7631322-7631323|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	634.4390136599541	2	634.439224	1266.86389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.334	1	92.334	91.834	92.834	0								0	0	0	0.63775	1	38584	38584		0.26902	0	1				35078	2395	17304	17381	40960	40960					0.2411370501570218
TSSAAGSE	8	Unmodified	_TSSAAGSE_					0	0	0		ENSG00000261272|ENST00000561890|MUC22	ENSG00000261272|ENST00000561890|MUC22	ENSG00000261272|ENST00000561890|MUC22	MSMS	GG20161007_CRH_Patient100_W632_01	3	355.1530334353447	2	355.153583	708.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.07	1	104.23	103.73	104.73	0.16055								0	0	0	1.0178	1	44022	44022		0.69038	0	1				35079	5422	17305	17382	40961	40961					-0.07320181638147005
TSSHFFFVF	9	Unmodified	_TSSHFFFVF_					0	0	0		tr|A0A553SG20|A0A553SG20_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09945PE=4SV=1	tr|A0A553SG20|A0A553SG20_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09945PE=4SV=1	tr|A0A553SG20|A0A553SG20_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_09945PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.7709228396416	2	559.768917	1117.52328	3.9972	0.0022375	-1.0734	-0.00060088	2.9238	0.0016366	559.7680002217671	95.892	0.1866	96.313	96.158	96.344	0.42119					8	5	2	0	0	0	0.68551	1	40357	40357		7.9102	2.6133	1	693960			35080	16091	17306	17383	40962	40962					-0.030779285854805494
TSTIARLSTSL	11	Unmodified	_TSTIARLSTSL_					0	0	0			REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	REV__nc|ENSG00000156920|Q8IZF6-2|ADGRG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3299438357353	2	575.327328	1148.6401	1.5808	0.0009095	3.9433	0.0022687	5.5242	0.0031782	575.3296391539602	66.581	0.25637	66.581	66.415	66.671	0					12	7	2	0	0	0	0.77451	1	27723	27723		16.149	2.5342	1	529050	+		35081	10526	17307	17384	40963	40963					0.0717276484363083
TSTVFLFA	8	Unmodified	_TSTVFLFA_					0	0	0		tr|A0A553SFP5|A0A553SFP5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09280PE=3SV=1	tr|A0A553SFP5|A0A553SFP5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09280PE=3SV=1	tr|A0A553SFP5|A0A553SFP5_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_09280PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	443.2424804568291	2	443.239461	884.46437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.23	104.73	105.73	0.056801								0	0	0	1.0178	1	44528	44528		2.5775	0	1				35082	16071	17308	17385	40964	40964					0.017515951201971802
TSYPDPILL	9	Unmodified	_TSYPDPILL_					0	0	0		ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1018.549609363079	1	1018.54554	1017.53826	1.503	0.0015309	2.4668	0.0025125	3.9698	0.0040435	1018.5467455789293	68.74	0.53389	70.106	69.816	70.35	1.3657					36	16	3	0	0	0	0.013238	3	28878	28780;28825;28878		104.8	44.41	1	5469100			35083	2142	17309	17386	40965;40966;40967	40967					0.030195184918625273
TSYPDPILL	9	Unmodified	_TSYPDPILL_					0	0	0		ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7765991091728	2	509.776408	1017.53826	2.47	0.0012591	-0.56082	-0.00028589	1.9091	0.00097324	509.77537878465637	68.678	0.50296	70.044	69.847	70.35	1.3657					34	15	3	0	0	0	0.069258	2	28813	28813;28884		60.39	22.238	1	4055100			35084	2142	17309	17386	40968;40969	40968					0.030195184918625273
TSYPDPILL	9	Unmodified	_TSYPDPILL_					0	0	0		ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1018.548693835735	1	1018.54554	1017.53826	2.1885	0.0022291	0.93386	0.00095117	3.1223	0.0031802	1018.5457284725039	68.124	0.53065	69.994	69.736	70.267	1.87					36	16	3	0	0	0	0.0075027	3	28555	28555;28600;28638		112.59	59.018	1	5526700			35085	2142	17309	17386	40970;40971;40972	40970					0.030195184918625273
TSYPDPILL	9	Unmodified	_TSYPDPILL_					0	0	0		ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7770568728447	2	509.776408	1017.53826	2.5192	0.0012842	-0.87367	-0.00044537	1.6455	0.00083883	509.77527089386336	68.153	0.47065	70.023	69.796	70.267	1.87					38	14	3	0	0	0	0.028763	2	28612	28569;28612		89.427	42.506	1	4398400			35086	2142	17309	17386	40973;40974	40974					0.030195184918625273
TSYRNWITSK	10	Unmodified	_TSYRNWITSK_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3159973025322	3	419.219172	1254.63569	1.0304	0.00043195	-0.039805	-1.6687E-05	0.99056	0.00041526	419.21883693217706	23.369	0.21573	23.602	23.474	23.69	0.23306					11	6	2	0	0	0	0.12523	1	9767	9767		3.0723	1.33	1	398710			35087	4766	17310	17387	40975	40975					0.018553004206978585
TSYRNWITSK	10	Unmodified	_TSYRNWITSK_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.3160888552666	3	419.219172	1254.63569	1.0212	0.00042811	2.9665	0.0012436	3.9877	0.0016717	419.22108732707824	22.345	0.1901	23.522	23.413	23.603	1.177					9	5	2	0	0	0	0.12551	1	9343	9343		3.3196	0.82116	1	410350			35088	4766	17310	17387	40976	40976					0.018553004206978585
TSYRNWITSK	10	Unmodified	_TSYRNWITSK_					0	0	0		ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	ENSG00000185873|ENST00000332644|TMPRSS11B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	419.3157531619072	3	419.219172	1254.63569	0.47048	0.00019724	-0.28686	-0.00012026	0.18363	7.6981E-05	419.2187823291873	21.962	0.21448	23.578	23.427	23.641	1.6158					10	6	2	0	0	0	0.12541	1	9149	9149		5.4027	1.8157	1	213300			35089	4766	17310	17387	40977	40977					0.018553004206978585
TTAPGTSV	8	Unmodified	_TTAPGTSV_					0	0	0		ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	ENSG00000215182|ENST00000621226|MUC5AC	MSMS	GG20161007_CRH_Patient100_A02_02	2	367.1899291872978	2	367.189968	732.365384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.03	1	105.09	104.59	105.59	0.056801								0	0	0	1.0178	1	44446	44446		4.756	2.1785	1				35090	5254	17311	17388	40978	40978					-0.011504278447091565
TTDFIYQLY	9	Unmodified	_TTDFIYQLY_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;PITRM1-PFKP|2|fusion;PITRM1-PFKP|1|fusion	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1163.572070300579	1	1163.56192	1162.55464	2.2928	0.0026678	-0.53396	-0.0006213	1.7588	0.0020465	1163.5609495821063	71.977	0.27126	73.801	73.694	73.966	1.824					13	8	2	0	0	0	0.076627	1	30246	30246		57.471	5.203	1	1442800			35091	816	17312	17389	40979	40979					-0.02013400342048044
TTDFIYQLY	9	Unmodified	_TTDFIYQLY_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;PITRM1-PFKP|2|fusion;PITRM1-PFKP|1|fusion	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1163.56192	1162.55464	2.4743	0.002879	-0.97222	-0.0011312	1.502	0.0017477	1163.5612486880427	72.458	0.3004	73.787	73.672	73.973	1.3297	-0.0068221	-0.00012317	NaN	57.471	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1210700			35092	816	17312	17389							-0.02013400342048044
TTDRHQSG	8	Unmodified	_TTDRHQSG_					0	0	0			REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1416503787041	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5883	1	3.2225	2.7225	3.7225	0.63417								0	0	0	1.0178	1	1066	1066		0.40072	0	1		+		35093	14054	17313	17390	40980	40980					-0.04922907841273627
TTDRHQSG	8	Unmodified	_TTDRHQSG_					0	0	0			REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414062380791	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1959	1	3.8195	3.3195	4.3195	0.62362								0	0	0	1.0178	1	1319	1319		0.40072	0	1		+		35094	14054	17313	17390	40981	40981					-0.04922907841273627
TTDRHQSG	8	Unmodified	_TTDRHQSG_					0	0	0			REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	REV__ENST00000589367.5_1_17:33464890-33466847:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1414977908134	3	301.142262	900.404957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0704	1	5.6917	5.1917	6.1917	0.62127								0	0	0	1.0178	1	2093	2093		0.40072	0	1		+		35095	14054	17313	17390	40982	40982					-0.04922907841273627
TTFPRPVTV	9	Unmodified	_TTFPRPVTV_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.2901489138603	2	509.290017	1016.56548	0.75579	0.00038492	-0.68008	-0.00034636	0.075715	3.8561E-05	509.28957420131957	34.453	0.23797	35.728	35.592	35.83	1.2746					67	28	3	0	0	0	0.0051116	2	14431	14431;14470		121.53	49.612	1	36272000			35096	3172	17314	17391	40983;40984	40983					0.057860468229023354
TTFPRPVTV	9	Unmodified	_TTFPRPVTV_					0	0	0		ENST00000471419.6_1_X:70511819-70517312:+|nuORF;nc|ENSG00000147140|Q15233-2|NONO;ENSG00000147140|ENST00000276079|NONO	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	ENST00000471419.6_1_X:70511819-70517312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.2896911501884	2	509.290017	1016.56548	1.025	0.00052202	-0.56624	-0.00028838	0.45876	0.00023364	509.2896704570113	33.971	0.24968	35.793	35.662	35.912	1.8227					51	29	2	0	0	0	0.014947	3	14242	14207;14242;14278		103.42	40.847	1	39288000			35097	3172	17314	17391	40985;40986;40987	40986					0.057860468229023354
TTGKKGKYLN	10	Unmodified	_TTGKKGKYLN_					0	0	0		ENST00000243298.2_1_X:103080673-103087036:-|nuORF	ENST00000243298.2_1_X:103080673-103087036:-|nuORF	ENST00000243298.2_1_X:103080673-103087036:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3195068240166	2	555.319306	1108.62406	2.7009	0.0014999	-3.0362	-0.001686	-0.33522	-0.00018615	555.3175766131332	103.75	1.21	103.81	102.94	104.15	0.059502					87	55	3	0	0	0	0.86043	1	43607	43607		5.7319	0.43497	1	48397000			35098	5570	17315	17392	40988	40988					0.07409103397390027
TTGSGAKG	8	Unmodified	_TTGSGAKG_					0	0	0			REV__ENST00000545289.5_1_17:18585014-18585560:-|nuORF	REV__ENST00000545289.5_1_17:18585014-18585560:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.1765930056572	2	339.674485	677.334418	2.261	0.00076799	3.94	0.0013383	6.201	0.0021063	339.6769433447683	100.54	0.12697	100.61	100.57	100.69	0.072716					5	3	2	0	0	0	2.3239	1	42113	42113		0	0	1	368710	+		35099	13158	17316	17393	40989	40989					-0.01715581158941859
TTILLIKWTWI	11	Unmodified	_TTILLIKWTWI_					0	0	0			REV__ENST00000366919.6_1_6:161537898-161538120:+|nuORF	REV__ENST00000366919.6_1_6:161537898-161538120:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	694.4232055544853	2	694.421031	1386.82751	2.7272	0.0018938	0.64568	0.00044837	3.3729	0.0023422	694.4213718143553	85.328	1.3251	85.328	84.653	85.978	0					96	41	4	0	0	0	1.0366	1	35536	35536		1.1933	0	1	2759500	+		35100	12614	17317	17394	40990	40990					0.14956828118988597
TTILLIKWTWI	11	Unmodified	_TTILLIKWTWI_					0	0	0			REV__ENST00000366919.6_1_6:161537898-161538120:+|nuORF	REV__ENST00000366919.6_1_6:161537898-161538120:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	694.4231445193291	2	694.421031	1386.82751	2.4911	0.0017299	0.99762	0.00069277	3.4888	0.0024227	694.4216787772452	84.872	0.47848	85.133	84.759	85.237	0.26083					27	14	2	0	0	0	1.0366	1	35483	35483		1.1933	0	1	2478000	+		35101	12614	17317	17394	40991	40991					0.14956828118988597
TTILLLEIL	9	Unmodified	_TTILLLEIL_					0	0	0			REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	514.2412597537041	2	514.833726	1027.6529	2.9065	0.0014963	-0.40052	-0.0002062	2.5059	0.0012901	514.8339849976273	101.78	0.094727	101.84	101.8	101.89	0.067009					6	2	3	0	0	0	0.11957	1	42606	42606		0	0	1	1649600	+		35102	9267	17318	17395	40992	40992					0.14017827973793828
TTILLLEIL	9	Unmodified	_TTILLLEIL_					0	0	0			REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	514.833726	1027.6529	3.4059	0.0017535	2.3214	0.0011952	5.7274	0.0029486	514.8355678240009	101.73	0.12822	101.9	101.83	101.96	0.17032	0.044997	0.0023602	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	367300	+		35103	9267	17318	17395							0.14017827973793828
TTILLLEIL	9	Unmodified	_TTILLLEIL_					0	0	0			REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	REV__MYH3|p.K485Nfs*96|1|0.04|ENSG00000109063|chr17:10642952-10642952|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.833726	1027.6529	3.5395	0.0018222	1.1889	0.00061209	4.7284	0.0024343	514.8349205353002	101.66	0.095062	101.85	101.78	101.87	0.19076	-0.00017922	0.0011941	NaN	0	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	475800	+		35104	9267	17318	17395							0.14017827973793828
TTIVLGPAV	9	Unmodified	_TTIVLGPAV_					0	0	0		tr|A0A553SKM4|A0A553SKM4_NIACIHeat-inducibletranscriptionrepressorHrcAOS=NialliacirculansOX=1397GN=hrcAPE=3SV=1	tr|A0A553SKM4|A0A553SKM4_NIACIHeat-inducibletranscriptionrepressorHrcAOS=NialliacirculansOX=1397GN=hrcAPE=3SV=1	tr|A0A553SKM4|A0A553SKM4_NIACIHeat-inducibletranscriptionrepressorHrcAOS=NialliacirculansOX=1397GN=hrcAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7682372927666	2	435.768386	869.522219	1.6862	0.00073481	-2.5731	-0.0011213	-0.88685	-0.00038646	435.76690415837396	69.979	1.2957	70.301	69.752	71.048	0.32223					93	41	3	0	0	0	0.83213	2	29303	29303;29357		2.0598	0	1	5043000			35105	16296	17319	17396	40993;40994	40993					0.08223857045618388
TTKIIKIT	8	Unmodified	_TTKIIKIT_					0	0	0		tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1727477908134	2	459.305136	916.595718	3.2854	0.001509	-2.6767	-0.0012294	0.60873	0.00027959	459.30411262595516	92.308	0.25276	92.476	92.281	92.534	0.16834					11	7	2	0	0	0	2.3239	1	38650	38650		0	0	1	250230			35106	16205	17320	17397	40995	40995					0.13408405488075914
TTKIIKIT	8	Unmodified	_TTKIIKIT_					0	0	0		tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	tr|A0A553SIK0|A0A553SIK0_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_14990PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	307.1156799197197	3	306.539182	916.595718	0.61717	0.00018919	-3.3124	-0.0010154	-2.6952	-0.00082619	306.538111635284	42.299	0.19332	43.639	43.571	43.764	1.3399					6	5	2	0	0	0	2.3239	1	17778	17778		0	0	1	113810			35107	16205	17320	17397	40996	40996					0.13408405488075914
TTKKAGRR	8	Unmodified	_TTKKAGRR_					0	0	0			REV__nc|ENSG00000105289|O95049-5|TJP3	REV__nc|ENSG00000105289|O95049-5|TJP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1732360720634	2	459.2856	916.556647	3.0852	0.001417	0.19671	9.0348E-05	3.2819	0.0015073	459.285332513749	84.142	0.53719	84.403	84.156	84.693	0.26083					41	16	3	0	0	0	2.3239	1	35308	35308		0.69038	0	1	3915600	+		35108	9165	17321	17398	40997	40997					0.09503117977089914
TTKKKMLK	8	Unmodified	_TTKKKMLK_					0	0	0		HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant;ENSG00000071794|ENST00000310053|HLTF;nc|ENSG00000071794|Q14527-2|HLTF;ENST00000493881.1_1_3:148769856-148778584:-|nuORF	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	HLTF|p.K848Tfs*25|1|0.08|ENSG00000071794|chr3:149039653-149039654|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3157531619072	2	489.312438	976.610322	2.3932	0.001171	1.311	0.00064149	3.7042	0.0018125	489.31311809386244	78.873	0.73534	79.182	78.769	79.505	0.30933					82	23	5	0	0	0	0.89181	1	32867	32867		0.6015	0	1	172780000			35109	873	17322	17399	40998	40998					0.12108154364591428
TTKKKRVK	8	Unmodified	_TTKKKRVK_					0	0	0			REV__nc|ENSG00000129990|O00445-2|SYT5	REV__nc|ENSG00000129990|O00445-2|SYT5	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.2270995974541	3	330.225709	987.655299	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.96	1	102.15	101.65	102.65	0.19076								0	0	0	1.0178	1	42871	42871		0.40072	0.40072	1		+		35110	14426	17323	17400	40999	40999					0.16097721222138262
TTKRHYRK	8	Unmodified	_TTKRHYRK_					0	0	0		nc|ENSG00000060237|Q9H4A3-4|WNK1;nc|ENSG00000060237|Q9H4A3-2|WNK1;ENSG00000060237|ENST00000315939|WNK1;nc|ENSG00000060237|Q9H4A3-5|WNK1;nc|ENSG00000060237|Q9H4A3-6|WNK1;nc|ENSG00000060237|Q9H4A3-7|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3174926638603	2	545.317432	1088.62031	1.4657	0.00079927	-0.53332	-0.00029083	0.93239	0.00050845	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.89178	1	30721	30721		0.69038	0.088878	1	5427600			35111	7824	17324	17401	41000	41000					0.07954478414171717
TTKTPVGL	8	Unmodified	_TTKTPVGL_					0	0	0			REV__ENSG00000008226|ENST00000308059|DLEC1	REV__ENSG00000008226|ENST00000308059|DLEC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	408.7454711794853	2	408.744911	815.475269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.089	1	41.399	40.899	41.899	1.3102								0	0	0	1.0178	1	16816	16816		2.3027	0.24298	1		+		35112	8521	17325	17402	41001	41001					0.06014997494492036
TTLLTIKK	8	Unmodified	_TTLLTIKK_					0	0	0		tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	tr|A0A7D6VQZ7|A0A7D6VQZ7_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.6496765017509	3	306.539182	916.595718	-2.1513	-0.00065947	1.9686	0.00060345	-0.18275	-5.6019E-05	306.5398860697214	44.98	3.508	44.98	43.088	46.596	0					203	111	2	0	0	0	2.3239	1	19468	19468		0	0	1	8432700			35113	16814	17326	17403	41002	41002					0.13408405488098651
TTLLVFLS	8	Unmodified	_TTLLVFLS_					0	0	0			REV__TPCN1|p.L334Ffs*42|1|0.26|ENSG00000186815|chr12:113276977-113276978|-/TGAGACAGAGACTTGCTCTGTTGCCCAGGCTGTA|frameshift_variant	REV__TPCN1|p.L334Ffs*42|1|0.26|ENSG00000186815|chr12:113276977-113276978|-/TGAGACAGAGACTTGCTCTGTTGCCCAGGCTGTA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	447.2728759646416	2	447.270761	892.52697	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.71	1	103.77	103.27	104.27	0.059502								0	0	0	1.0178	1	43569	43569		2.3027	0	1		+		35114	11513	17327	17404	41003	41003					0.07640741188379252
TTLRITYP	8	Unmodified	_TTLRITYP_					0	0	0		ENST00000490541.5_1_1:44365189-44395890:+|nuORF;ENST00000461375.1_1_1:44280573-44366462:+|nuORF;nc|ENSG00000126091|Q11203-21|ST3GAL3;nc|ENSG00000126091|Q11203-16|ST3GAL3;nc|ENSG00000126091|Q11203-8|ST3GAL3;nc|ENSG00000126091|Q11203-7|ST3GAL3;nc|ENSG00000126091|Q11203-5|ST3GAL3;nc|ENSG00000126091|Q11203-15|ST3GAL3;ENSG00000126091|ENST00000347631|ST3GAL3;nc|ENSG00000126091|Q11203-2|ST3GAL3;nc|ENSG00000126091|Q11203-19|ST3GAL3;nc|ENSG00000126091|Q11203-13|ST3GAL3;nc|ENSG00000126091|Q11203-4|ST3GAL3	ENST00000490541.5_1_1:44365189-44395890:+|nuORF	ENST00000490541.5_1_1:44365189-44395890:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.1862060427666	3	322.18692	963.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.715	1	73.715	73.215	74.215	0								0	0	0	1.0178	1	30695	30695		0.45834	0	1				35115	2299	17328	17405	41004	41004					0.05570357931549097
TTLRKKKK	8	Unmodified	_TTLRKKKK_					0	0	0		nc|ENSG00000157119|Q2TBA0-2|KLHL40;ENSG00000157119|ENST00000287777|KLHL40	nc|ENSG00000157119|Q2TBA0-2|KLHL40	nc|ENSG00000157119|Q2TBA0-2|KLHL40	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.8981201052666	3	334.897593	1001.67095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.22002	1	0.95581	0.45581	1.4558	0.73579								0	0	0	1.0178	1	90	90		0	0	1				35116	3466	17329	17406	41005	41005					0.1701800773918194
TTLVIKEVS	9	Unmodified	_TTLVIKEVS_					0	0	0			REV__ENSG00000182197|ENST00000378204|EXT1	REV__ENSG00000182197|ENST00000378204|EXT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2981750369072	2	495.297507	988.580462	1.6379	0.00081124	-0.80091	-0.00039669	0.83697	0.00041455	495.2971691971563	92.788	1.4271	92.788	92.473	93.9	0					108	45	5	0	0	0	0.83213	1	39125	39125		2.0598	0	1	84094000	+		35117	11343	17330	17407	41006	41006					0.08571493900240057
TTLVLLGSRF	10	Unmodified	_TTLVLLGSRF_					0	0	0			REV__ENSG00000068120|ENST00000393818|COASY	REV__ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8311645388603	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.88022	1	30175	30175		3.5965	0.60125	1	5931400	+		35118	8700	17331	17408	41007	41007					0.10094577919812764
TTMYVTATL	9	Oxidation (M)	_TTM(Oxidation (M))YVTATL_		TTM(1)YVTATL		TTM(44)YVTATL	0	0	1		ENST00000409080.5_3_2:173351772-173351811:+|nuORF	ENST00000409080.5_3_2:173351772-173351811:+|nuORF	ENST00000409080.5_3_2:173351772-173351811:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7532531619072	2	508.752075	1015.4896	3.3896	0.0017245	-0.583	-0.0002966	2.8066	0.0014279	508.751301552481	65.187	0.37665	66.586	66.38	66.757	1.3989					28	11	3	0	0	0	0.11478	2	27311	27311;27359		44.407	8.3628	1	3829700			35119	6376	17332	17409	41008;41009	41008		104			-0.017527181395280422
TTMYVTATL	9	Oxidation (M)	_TTM(Oxidation (M))YVTATL_		TTM(1)YVTATL		TTM(44)YVTATL	0	0	1		ENST00000409080.5_3_2:173351772-173351811:+|nuORF	ENST00000409080.5_3_2:173351772-173351811:+|nuORF	ENST00000409080.5_3_2:173351772-173351811:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7530090212822	2	508.752075	1015.4896	2.0641	0.0010501	-0.35353	-0.00017986	1.7106	0.00087028	508.7518251578586	64.757	0.47145	66.685	66.455	66.926	1.928					32	14	3	0	0	0	0.11478	1	27152	27152		44.407	8.3628	1	2803300			35120	6376	17332	17409	41010	41010		104			-0.017527181395280422
TTQEITQLF	9	Unmodified	_TTQEITQLF_					0	0	0		STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant;nc|ENSG00000124222|O14662-6|STX16;nc|ENSG00000124222|O14662-2|STX16;nc|ENSG00000124222|O14662-4|STX16;nc|ENSG00000124222|O14662-5|STX16;ENSG00000124222|ENST00000371141|STX16	STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant	STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7838622927666	2	540.782222	1079.54989	3.1311	0.0016932	-1.0742	-0.00058093	2.0569	0.0011123	540.7814859272077	60.78	0.30435	62.745	62.577	62.881	1.9653					16	9	2	0	0	0	0.27148	1	25510	25510		26.884	6.43	1	1631700			35121	2220	17333	17410	41011	41011					0.013297155151803963
TTQEITQLF	9	Unmodified	_TTQEITQLF_					0	0	0		STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant;nc|ENSG00000124222|O14662-6|STX16;nc|ENSG00000124222|O14662-2|STX16;nc|ENSG00000124222|O14662-4|STX16;nc|ENSG00000124222|O14662-5|STX16;ENSG00000124222|ENST00000371141|STX16	STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant	STX16|p.D209Qfs*24|1|0.03|ENSG00000124222|chr20:58670579-58670580|-/CAGCGTGGGGTACCGACCAAGGCTGG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	540.782222	1079.54989	3.1243	0.0016896	-1.31	-0.0007084	1.8144	0.00098118	540.7819339675345	61.267	0.3013	62.685	62.533	62.834	1.4177	-0.029984	-0.00017531	NaN	26.884	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1255100			35122	2220	17333	17410							0.013297155151803963
TTQGNQLAEM	10	Unmodified	_TTQGNQLAEM_					0	0	0			REV__UNK|p.L382Pfs*48|1|0.06|ENSG00000132478|chr17:75817366-75817366|T/-|frameshift_variant	REV__UNK|p.L382Pfs*48|1|0.06|ENSG00000132478|chr17:75817366-75817366|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7544433474541	2	546.753138	1091.49172	2.7134	0.0014836	-0.96569	-0.00052799	1.7477	0.00095558	546.7523692366092	75.151	0.46698	76.932	76.699	77.166	1.7817					40	14	4	0	0	0	0.14781	1	31524	31524		55.503	3.2344	1	4552400	+		35123	9846	17334	17411	41012	41012					-0.05036289401732574
TTQKLKVV	8	Unmodified	_TTQKLKVV_					0	0	0			REV__tr|A0A553SFW1|A0A553SFW1_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09610PE=4SV=1	REV__tr|A0A553SFW1|A0A553SFW1_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09610PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	459.1735412478447	2	458.794935	915.575317	1.3615	0.00062467	-0.81045	-0.00037183	0.55109	0.00025284	458.7936679579975	99.402	0.089508	99.402	99.35	99.44	0					4	2	2	0	0	0	2.3239	1	41605	41605		2.3027	0	1	734520	+		35124	14725	17335	17412	41013	41013					0.11415234828280063
TTRLVCYDR	9	Unmodified	_TTRLVCYDR_					0	0	0		chr11:65085226-65086720|257|16.22|0.74|4.45|+|2|ZFPL1,ZFPL1|1	chr11:65085226-65086720|257|16.22|0.74|4.45|+|2|ZFPL1,ZFPL1|1	chr11:65085226-65086720|257|16.22|0.74|4.45|+|2|ZFPL1,ZFPL1|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.1958801150322	3	376.193969	1125.56008	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.603	1	97.694	97.194	98.194	0.090881								0	0	0	0.42693	1	40839	40839		0.96228	0	1				35125	187	17336	17413	41014	41014					0.0023199996876428486
TTRRVGLLL	9	Unmodified	_TTRRVGLLL_					0	0	0			REV__ENST00000500118.2_1_8:6263917-6263968:-|nuORF	REV__ENST00000500118.2_1_8:6263917-6263968:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.8346435427666	2	514.832383	1027.65021	1.4596	0.00075145	2.3626	0.0012163	3.8222	0.0019678	514.8337024225405	101.82	0.12254	101.82	101.74	101.86	0					7	3	3	0	0	0	0.84963	1	42637	42637		0.6015	0	1	3176500	+		35126	13503	17337	17414	41015	41015					0.13749417359531435
TTRRVRVS	8	Unmodified	_TTRRVRVS_					0	0	0		ENST00000427468.6_1_1:38197223-38200972:-|nuORF	ENST00000427468.6_1_1:38197223-38200972:-|nuORF	ENST00000427468.6_1_1:38197223-38200972:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7985717654228	2	487.796332	973.578111	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.49	1	104.66	104.16	105.16	0.1731								0	0	0	1.0178	1	44219	44219		2.3027	0	1				35127	6476	17338	17415	41016	41016					0.09026503005804898
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1342956423759	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.908	1	64.908	64.408	65.408	0								0	0	0	1.0178	1	27052	27052		0.45834	0	1		+		35128	9770	17339	17416	41017	41017					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1330749392509	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.225	1	65.225	64.725	65.725	0								0	0	0	1.0178	1	27184	27184		0.45834	0	1		+		35129	9770	17339	17416	41018	41018					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1337158083916	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.342	1	65.342	64.842	65.842	0								0	0	0	1.0178	1	27232	27232		0.45834	0	1		+		35130	9770	17339	17416	41019	41019					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1339294314384	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.44	1	65.44	64.94	65.94	0								0	0	0	1.0178	1	27271	27271		0.45834	0	1		+		35131	9770	17339	17416	41020	41020					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1340515017509	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.536	1	65.536	65.036	66.036	0								0	0	0	1.0178	1	27310	27310		0.45834	0	1		+		35132	9770	17339	17416	41021	41021					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1339294314384	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.633	1	65.633	65.133	66.133	0								0	0	0	1.0178	1	27349	27349		0.45834	0	1		+		35133	9770	17339	17416	41022	41022					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1344787478447	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.727	1	65.727	65.227	66.227	0								0	0	0	1.0178	1	27387	27387		0.45834	0	1		+		35134	9770	17339	17416	41023	41023					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1338989138603	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.918	1	65.918	65.418	66.418	0								0	0	0	1.0178	1	27466	27466		0.45834	0	1		+		35135	9770	17339	17416	41024	41024					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1341430544853	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.111	1	66.111	65.611	66.611	0								0	0	0	1.0178	1	27543	27543		0.45834	0	1		+		35136	9770	17339	17416	41025	41025					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1337768435478	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.208	1	66.208	65.708	66.708	0								0	0	0	1.0178	1	27582	27582		0.45834	0	1		+		35137	9770	17339	17416	41026	41026					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1340515017509	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.404	1	66.404	65.904	66.904	0								0	0	0	1.0178	1	27661	27661		0.45834	0	1		+		35138	9770	17339	17416	41027	41027					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1339904665947	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.501	1	66.501	66.001	67.001	0								0	0	0	1.0178	1	27700	27700		0.45834	0	1		+		35139	9770	17339	17416	41028	41028					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1337158083916	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.597	1	66.597	66.097	67.097	0								0	0	0	1.0178	1	27739	27739		0.45834	0	1		+		35140	9770	17339	17416	41029	41029					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1338683962822	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.699	1	66.699	66.199	67.199	0								0	0	0	1.0178	1	27781	27781		0.45834	0	1		+		35141	9770	17339	17416	41030	41030					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1337768435478	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.828	1	66.828	66.328	67.328	0								0	0	0	1.0178	1	27834	27834		0.45834	0	1		+		35142	9770	17339	17416	41031	41031					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1338378787041	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.948	1	66.948	66.448	67.448	0								0	0	0	1.0178	1	27882	27882		0.45834	0	1		+		35143	9770	17339	17416	41032	41032					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1333190798759	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.044	1	67.044	66.544	67.544	0								0	0	0	1.0178	1	27921	27921		0.45834	0	1		+		35144	9770	17339	17416	41033	41033					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1319152712822	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.256	1	67.256	66.756	67.756	0								0	0	0	1.0178	1	28014	28014		0.45834	0	1		+		35145	9770	17339	17416	41034	41034					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343261599541	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.995	1	27.257	26.757	27.757	0.26173								0	0	0	1.0178	1	11287	11287		0.45834	0	1		+		35146	9770	17339	17416	41035	41035					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345397830009	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.37	1	115.41	114.91	115.91	0.041786								0	0	0	1.0178	1	49635	49635		0.45834	0	1		+		35147	9770	17339	17416	41036	41036					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343261599541	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.66	1	115.71	115.21	116.21	0.041786								0	0	0	1.0178	1	49754	49754		0.45834	0	1		+		35148	9770	17339	17416	41037	41037					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345092654228	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.27	1	116.32	115.82	116.82	0.041786								0	0	0	1.0178	1	49999	49999		0.45834	0	1		+		35149	9770	17339	17416	41038	41038					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346618533134	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.9	1	116.94	116.44	117.44	0.041039								0	0	0	1.0178	1	50248	50248		0.45834	0	1		+		35150	9770	17339	17416	41039	41039					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347228884697	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.99	1	117.04	116.54	117.54	0.041039								0	0	0	1.0178	1	50288	50288		0.45834	0	1		+		35151	9770	17339	17416	41040	41040					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347228884697	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.44	1	117.48	116.98	117.98	0.041039								0	0	0	1.0178	1	50469	50469		0.45834	0	1		+		35152	9770	17339	17416	41041	41041					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344177126884	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.31	1	118.35	117.85	118.85	0.041039								0	0	0	1.0178	1	50823	50823		0.45834	0	1		+		35153	9770	17339	17416	41042	41042					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1347839236259	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.43	1	118.47	117.97	118.97	0.041039								0	0	0	1.0178	1	50872	50872		0.45834	0	1		+		35154	9770	17339	17416	41043	41043					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343566775322	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.81	1	118.85	118.35	119.35	0.041039								0	0	0	1.0178	1	51029	51029		0.45834	0	1		+		35155	9770	17339	17416	41044	41044					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1343261599541	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.06	1	119.1	118.6	119.6	0.041039								0	0	0	1.0178	1	51132	51132		0.45834	0	1		+		35156	9770	17339	17416	41045	41045					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344787478447	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.16	1	119.2	118.7	119.7	0.041039								0	0	0	1.0178	1	51171	51171		0.45834	0	1		+		35157	9770	17339	17416	41046	41046					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1340820193291	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.61	1	119.65	119.15	120.15	0.041039								0	0	0	1.0178	1	51354	51354		0.45834	0	1		+		35158	9770	17339	17416	41047	41047					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1342346072197	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.86	1	119.9	119.4	120.4	0.041039								0	0	0	1.0178	1	51456	51456		0.45834	0	1		+		35159	9770	17339	17416	41048	41048					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1337463259697	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.292	1	35.566	35.066	36.066	1.2746								0	0	0	1.0178	1	14394	14394		0.45834	0	1		+		35160	9770	17339	17416	41049	41049					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1347228884697	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.7	1	94.571	94.071	95.071	0.87176								0	0	0	1.0178	1	39430	39430		0.45834	0	1		+		35161	9770	17339	17416	41050	41050					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1342346072197	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.99	1	120.22	119.72	120.72	0.22596								0	0	0	1.0178	1	51825	51825		0.45834	0	1		+		35162	9770	17339	17416	41051	41051					-0.08615391469277256
TTTDTTEY	8	Unmodified	_TTTDTTEY_					0	0	0			REV__ENSG00000130227|ENST00000252512|XPO7	REV__ENSG00000130227|ENST00000252512|XPO7	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1347228884697	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.085	1	35.908	35.408	36.408	1.8227								0	0	0	1.0178	1	14294	14294		0.45834	0	1		+		35163	9770	17339	17416	41052	41052					-0.08615391469277256
TTTHTLPSPA	10	Unmodified	_TTTHTLPSPA_					0	0	0			REV__ENSG00000039523|ENST00000042381|RIPOR1	REV__ENSG00000039523|ENST00000042381|RIPOR1	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2701293826103	2	513.266739	1024.51892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.9	1	101.97	101.47	102.47	0.067009								0	0	0	0.66176	1	42662	42662		1.4819	0.15237	1		+		35164	8592	17340	17417	41053	41053					0.0076456220097043115
TTTKRKKLR	9	Unmodified	_TTTKRKKLR_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3695556521416	2	566.369664	1130.72478	0.41882	0.00023721	-1.226	-0.00069437	-0.80718	-0.00045716	566.3692066815261	19.687	0.14867	21.21	21.108	21.256	1.5237					7	4	2	0	0	0	0.85019	1	8192	8192		0.52476	0	1	389960	+		35165	9311	17341	17418	41054	41054					0.16464180170873988
TTTKRKKLR	9	Unmodified	_TTTKRKKLR_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	566.369664	1130.72478	0.5342	0.00030255	-2.0894	-0.0011834	-1.5552	-0.00088081	566.8701162408746	21.032	0.15283	21.242	21.135	21.287	0.21024	-0.012073	-0.0015801	NaN	0.52476	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	223000	+		35166	9311	17341	17418							0.16464180170873988
TTTKRKKLR	9	Unmodified	_TTTKRKKLR_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	566.369664	1130.72478	0.8976	0.00050837	1.198	0.00067851	2.0956	0.0011869	566.3699526038145	20.185	0.20629	21.31	21.237	21.443	1.1254	0.055935	0.0021437	NaN	0.52476	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	227060	+		35167	9311	17341	17418							0.16464180170873988
TTTKRKKLR	9	Unmodified	_TTTKRKKLR_					0	0	0			REV__ENSG00000110975|ENST00000228567|SYT10	REV__ENSG00000110975|ENST00000228567|SYT10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	566.369664	1130.72478	0.41882	0.00023721	-1.226	-0.00069437	-0.80718	-0.00045716	566.3692066815261	19.687	0.14867	21.21	21.108	21.256	1.5237	-0.043862	-0.00060211	NaN	0.52476	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	389960	+		35168	9311	17341	17418							0.16464180170873988
TTTPIKVTA	9	Unmodified	_TTTPIKVTA_					0	0	0			REV__ENSG00000078081|ENST00000265598|LAMP3	REV__ENSG00000078081|ENST00000265598|LAMP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	311.1855956912041	3	311.186809	930.538597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.89	1	103.89	103.39	104.39	0								0	0	0	0.42693	1	43730	43730		0.96228	0	1		+		35169	8786	17342	17419	41055	41055					0.07054938211706485
TTTRTLIK	8	Unmodified	_TTTRTLIK_					0	0	0		nc|ENSG00000187848|Q9UBL9-4|P2RX2;nc|ENSG00000187848|Q9UBL9-7|P2RX2;nc|ENSG00000187848|Q9UBL9-2|P2RX2;nc|ENSG00000187848|Q9UBL9-3|P2RX2;ENSG00000187848|ENST00000643471|P2RX2;nc|ENSG00000187848|Q9UBL9-5|P2RX2;nc|ENSG00000187848|Q9UBL9-6|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	nc|ENSG00000187848|Q9UBL9-4|P2RX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	933.5753661990166	1	933.572757	932.565481	2.796	0.0026103	0.46222	0.00043151	3.2583	0.0030418	933.5728624783362	107.73	0.1812	107.78	107.68	107.86	0.052452					29	9	4	0	0	0	0.89178	1	46191	46191		0.69038	0	1	203950000			35170	7955	17343	17420	41056	41056					0.09650046822912373
TTTSRKLL	8	Unmodified	_TTTSRKLL_					0	0	0		ENST00000380913.7_1_X:9864694-9900474:+|nuORF	ENST00000380913.7_1_X:9864694-9900474:+|nuORF	ENST00000380913.7_1_X:9864694-9900474:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	307.1890136599541	3	307.190553	918.549831	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.82	1	103.82	103.32	104.32	0								0	0	0	1.0178	1	43680	43680		0.45834	0	1				35171	6230	17344	17421	41057	41057					0.08729760305857326
TTTSSSSSSS	10	Unmodified	_TTTSSSSSSS_					0	0	0		ENSG00000066084|ENST00000301180|DIP2B;ENST00000394166.7_1_15:96874716-96874860:+|nuORF;ENST00000549620.5_1_12:50898851-51072694:+|nuORF;ENST00000538126.5_1_16:71712656-71757677:-|nuORF;nc|ENSG00000040199|Q6ZVD8-2|PHLPP2;nc|ENSG00000040199|Q6ZVD8-3|PHLPP2;ENSG00000040199|ENST00000568954|PHLPP2;ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B	ENSG00000066084|ENST00000301180|DIP2B;ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1338989138603	3	311.133209	930.377799	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.45	1	110.5	110	111	0.047043								0	0	0	0.66264	1	47650	47650		0	0	1				35172	2536;799	17345	17422	41058	41058					-0.09017480962961599
TTVIKLNA	8	Unmodified	_TTVIKLNA_					0	0	0		nc|ENSG00000204962|Q9Y5H6-2|PCDHA8;ENSG00000204962|ENST00000531613|PCDHA8	nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	nc|ENSG00000204962|Q9Y5H6-2|PCDHA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2657043337822	2	430.26601	858.517468	2.0761	0.00089328	-2.0185	-0.00086848	0.057641	2.4801E-05	430.26512130102367	71.672	0.6675	71.996	71.751	72.418	0.32359					54	20	4	0	0	0	0.89008	1	30004	30004		2.5775	0	1	14577000			35173	5169	17346	17423	41059	41059					0.08254972902830104
TTYHELIPSR	10	Unmodified	_TTYHELIPSR_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2173950076103	3	406.215539	1215.62479	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.205	1	67.205	66.705	67.705	0								0	0	0	0.66176	1	27990	27990		0.62683	0	1				35174	3303	17347	17424	41060	41060					0.025598980464110355
TVADKTILV	9	Unmodified	_TVADKTILV_					0	0	0			REV__tr|A0A7D6ZH28|A0A7D6ZH28_9CLOTLargeribosomalsubunitproteinuL4OS=ClostridiumintestinaleOX=36845GN=rplDPE=3SV=1	REV__tr|A0A7D6ZH28|A0A7D6ZH28_9CLOTLargeribosomalsubunitproteinuL4OS=ClostridiumintestinaleOX=36845GN=rplDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2932311892509	2	480.292225	958.569897	0.98932	0.00047516	0.21219	0.00010191	1.2015	0.00057708	480.29223288981075	38.357	0.37669	40.193	39.959	40.335	1.8366					28	11	3	0	0	0	0.11643	1	16121	16121		43.858	0.085901	1	6572800	+		35175	15645	17348	17425	41061	41061					0.08895511245827947
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.8034545779228	2	544.802957	1087.59136	1.7927	0.00097666	-0.65717	-0.00035803	1.1355	0.00061864	544.8025462736097	81.718	0.35776	81.718	81.527	81.885	0					24	11	4	0	0	0	0.051733	1	34031	34031		78.149	42.022	1	2631400			35176	1564	17349	17426	41062	41062					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1088.603686511517	1	1088.59864	1087.59136	2.1326	0.0023215	-0.063324	-6.8935E-05	2.0693	0.0022526	1088.5998509052167	81.646	0.21146	81.646	81.582	81.794	0					12	6	2	0	0	0	0.35292	1	34034	34034		36.127	9.8589	1	669470			35177	1564	17349	17426	41063	41063					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	544.8043090701103	2	544.802957	1087.59136	2.043	0.001113	-0.91092	-0.00049627	1.1321	0.00061678	544.8022765438327	81.31	0.36021	81.6	81.431	81.791	0.29056					19	11	2	0	0	0	0.22411	1	33976	33976		46.021	20.622	1	1802300			35178	1564	17349	17426	41064	41064					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1088.603930652142	1	1088.59864	1087.59136	2.8537	0.0031066	-2.7213	-0.0029624	0.13247	0.00014421	1088.5960440777965	81.288	0.24181	81.579	81.431	81.673	0.29056					10	7	2	0	0	0	0.17319	1	33978	33978		52.268	19.963	1	1148600			35179	1564	17349	17426	41065	41065					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8045532107353	2	544.802957	1087.59136	2.4942	0.0013588	1.7447	0.00095052	4.2389	0.0023094	544.8043855047005	80.364	0.55618	81.615	81.293	81.85	1.2512					22	17	2	0	0	0	0.44465	1	33720	33720		30.637	10.183	1	1265100			35180	1564	17349	17426	41066	41066					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1088.604418933392	1	1088.59864	1087.59136	2.3345	0.0025414	-1.9946	-0.0021713	0.33999	0.00037011	1088.5975255317308	80.34	0.24786	81.591	81.45	81.698	1.2512					10	7	2	0	0	0	0.076926	1	33729	33729		68.081	35.295	1	1199300			35181	1564	17349	17426	41067	41067					0.05106896274514838
TVADVVLWSV	10	Unmodified	_TVADVVLWSV_					0	0	0		nc|ENSG00000106305|Q13155-2|AIMP2;ENSG00000106305|ENST00000223029|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	nc|ENSG00000106305|Q13155-2|AIMP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8042480349541	2	544.802957	1087.59136	1.2954	0.00070571	1.8171	0.00098997	3.1125	0.0016957	544.8041976674623	79.902	0.43565	81.619	81.353	81.789	1.7167					23	13	3	0	0	0	0.076926	1	33507	33507		68.081	44.06	1	1320000			35182	1564	17349	17426	41068	41068					0.05106896274514838
TVAEIKAQY	9	Unmodified	_TVAEIKAQY_					0	0	0		KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7802001833916	2	511.779482	1021.54441	2.8289	0.0014478	-2.59	-0.0013255	0.23887	0.00012225	511.7782360083428	77.274	0.31776	78.555	78.378	78.695	1.2809					20	9	3	0	0	0	0.04145	1	32446	32446		74.929	6.8483	1	1777000			35183	7670	17350	17427	41069	41069					0.03450036723370431
TVAEIKAQY	9	Unmodified	_TVAEIKAQY_					0	0	0		KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	KRT83|p.I279T|1|0.2|ENSG00000170523|chr12:52316938-52316938|A/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.779482	1021.54441	1.9974	0.0010222	-2.4059	-0.0012313	-0.40857	-0.0002091	511.77802155393744	78.669	0.25072	78.669	78.505	78.756	0	0.10206	0.00058557	NaN	74.929	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	593000			35184	7670	17350	17427							0.03450036723370431
TVAEVIQSV	9	Unmodified	_TVAEVIQSV_					0	0	0		KIF26B-SMYD3|3|fusion;ENSG00000162849|ENST00000407071|KIF26B;nc|ENSG00000162849|Q2KJY2-2|KIF26B	KIF26B-SMYD3|3|fusion	KIF26B-SMYD3|3|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2666503787041	2	473.266207	944.517862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.75	1	48.133	47.633	48.633	1.3825								0	0	0	0.10193	1	19581	19581		34.102	10.954	1				35185	7667	17351	17428	41070	41070					0.04338347832060663
TVALIILVI	9	Unmodified	_TVALIILVI_					0	0	0			REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	954.6591674685478	1	954.659781	953.652505	2.769	0.0026435	-3.5858	-0.0034232	-0.8168	-0.00077976	954.6565291338538	98.324	0.2354	98.405	98.33	98.566	0.080376					14	8	2	0	0	0	0.042029	1	41183	41183		74.423	0	1	263770000	+		35186	15046	17352	17429	41071	41071					0.17382453044604063
TVALIILVI	9	Unmodified	_TVALIILVI_					0	0	0			REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.6628906130791	1	954.659781	953.652505	2.8064	0.0026791	-2.0444	-0.0019517	0.76197	0.00072742	954.6574253586525	98.196	0.27953	98.424	98.362	98.642	0.22776					19	9	3	0	0	0	0.042029	1	41370	41370		74.423	0	1	327490000	+		35187	15046	17352	17429	41072	41072					0.17382453044604063
TVALIILVI	9	Unmodified	_TVALIILVI_					0	0	0			REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	REV__tr|A0A553SN86|A0A553SN86_NIACITVP38/TMEM64familymembraneproteinOS=NialliacirculansOX=1397GN=CEQ21_23985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.6598388552666	1	954.659781	953.652505	3.4663	0.0033092	-2.1993	-0.0020996	1.267	0.0012095	954.6573635244263	98.116	0.25805	98.372	98.276	98.534	0.25636					18	8	3	0	0	0	0.076627	1	41340	41340		57.471	0	1	317730000	+		35188	15046	17352	17429	41073	41073					0.17382453044604063
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	845.5224487185478	1	845.520328	844.513051	1.2165	0.0010286	1.2115	0.0010243	2.428	0.0020529	845.5211378422708	107.87	0.19696	107.87	107.75	107.95	0					33	10	4	0	0	0	0.89198	2	46317	46317;46403		0	0	1	309980000			35189	16065	17353	17430	41074;41075	41074					0.08457508479966691
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	845.6134521365166	1	845.520328	844.513051	2.9352	0.0024818	1.2328	0.0010424	4.1681	0.0035242	845.5209790676385	106.2	0.14624	106.36	106.26	106.41	0.15781					19	7	3	0	0	0	0.89198	2	45391	45391;45404		0	0	1	110870000			35190	16065	17353	17430	41076;41077	41076					0.08457508479966691
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	845.5229369997978	1	845.520328	844.513051	3.0519	0.0025804	0.75816	0.00064104	3.8101	0.0032215	845.5206379780851	106.17	0.16205	106.33	106.24	106.4	0.16174					26	8	4	0	0	0	0.89198	1	45325	45325		0	0	1	84864000			35191	16065	17353	17430	41078	41078					0.08457508479966691
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	845.520328	844.513051	2.7817	0.002352	-0.048202	-4.0756E-05	2.7335	0.0023112	845.5200336088992	107.85	0.21571	107.9	107.77	107.99	0.052452	-0.017054	-3.4959E-05	NaN	0	33	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419420000			35192	16065	17353	17430							0.08457508479966691
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	845.520328	844.513051	2.9354	0.0024819	-0.55068	-0.00046561	2.3847	0.0020163	845.5195902045632	107.81	0.17696	107.96	107.86	108.04	0.15781	0.044707	-0.00045982	NaN	0	30	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	468090000			35193	16065	17353	17430							0.08457508479966691
TVARKLGT	8	Unmodified	_TVARKLGT_					0	0	0		tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	tr|A0A553SFM1|A0A553SFM1_NIACICarbamoylphosphatesynthaselargechainOS=NialliacirculansOX=1397GN=carBPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	845.520328	844.513051	3.0495	0.0025784	-1.0367	-0.00087655	2.0128	0.0017018	845.5190583044375	107.78	0.20206	107.94	107.83	108.03	0.15795	0.023012	-0.00087076	NaN	0	30	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	350630000			35194	16065	17353	17430							0.08457508479966691
TVAVKMLKE	9	Unmodified	_TVAVKMLKE_					0	0	0		nc|ENSG00000037280|P35916-1|FLT4;ENSG00000037280|ENST00000261937|FLT4;nc|ENSG00000102755|P17948-5|FLT1;ENSG00000102755|ENST00000282397|FLT1;ENSG00000128052|ENST00000263923|KDR;RET|p.L1027Rfs*12|1|0.07|ENSG00000165731|chr10:43126612-43126613|-/CAGGAGTCCTGGGAGCTCTATGCAG|frameshift_variant;nc|ENSG00000165731|P07949-2|RET;ENSG00000165731|ENST00000355710|RET	nc|ENSG00000037280|P35916-1|FLT4;ENSG00000128052|ENST00000263923|KDR;RET|p.L1027Rfs*12|1|0.07|ENSG00000165731|chr10:43126612-43126613|-/CAGGAGTCCTGGGAGCTCTATGCAG|frameshift_variant	ENSG00000128052|ENST00000263923|KDR	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8050414919853	2	509.801903	1017.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.916	1	66.916	66.416	67.416	0								0	0	0	0.42693	1	27870	27870		5.7319	0.83484	1				35195	2357;650;3854	17354	17431	41079	41079					0.08116144265068215
TVAVSSGV	8	Unmodified	_TVAVSSGV_					0	0	0			REV__VARS2|p.Q485Rfs*55|1|0.33|ENSG00000137411|chr6:30920722-30920722|C/-|frameshift_variant	REV__VARS2|p.Q485Rfs*55|1|0.33|ENSG00000137411|chr6:30920722-30920722|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2014953494072	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9552	1	2.1023	1.6023	2.6023	0.14703								0	0	0	1.0178	1	804	804		0.79363	0	1		+		35196	10019	17355	17432	41080	41080					0.01566162534970772
TVCAHEEL	8	Unmodified	_TVCAHEEL_					0	0	0		chr1:16974376-16975269|293|10.68|0.37|4.85|-|2|None,MFAP2|1;ENST00000490075.5_1_1:17301417-17303350:-|nuORF;nc|ENSG00000117122|P55001-3|MFAP2;nc|ENSG00000117122|P55001-2|MFAP2;ENSG00000117122|ENST00000375535|MFAP2	chr1:16974376-16975269|293|10.68|0.37|4.85|-|2|None,MFAP2|1	chr1:16974376-16975269|293|10.68|0.37|4.85|-|2|None,MFAP2|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414672732353	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.64	1	115.68	115.18	116.18	0.041786								0	0	0	1.0178	1	49744	49744		1.8442	0	1				35197	164	17356	17433	41081	41081					-0.05306713659365414
TVCDNCISMRA	11	Unmodified	_TVCDNCISMRA_					0	0	0		tr|A0A7D6VMK1|A0A7D6VMK1_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14040PE=4SV=1	tr|A0A7D6VMK1|A0A7D6VMK1_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14040PE=4SV=1	tr|A0A7D6VMK1|A0A7D6VMK1_9CLOTGGDEFdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14040PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483398318291	4	303.884701	1211.5097	0.3817	0.00011599	3.3671	0.0010232	3.7488	0.0011392	304.13668555820186	52.705	0.46259	54.677	54.32	54.783	1.9722					24	15	2	0	0	0	0.14606	1	22038	22038		0.073264	0.073264	1	2254900			35198	16715	17357	17434	41082	41082					-0.08759613742881811
TVCGLALVIS	10	Carbamidomethyl (C)	_TVC(Carbamidomethyl (C))GLALVIS_	TVC(1)GLALVIS		TVC(59)GLALVIS		0	1	0			REV__ENSG00000157005|ENST00000287641|SST	REV__ENSG00000157005|ENST00000287641|SST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7914916872978	2	516.791535	1031.56852	2.9739	0.0015369	-2.4499	-0.0012661	0.52406	0.00027083	516.7900030441491	78.769	1.0257	80.036	79.634	80.66	1.2668					44	32	2	0	0	0	0.12991	1	33089	33089		58.679	6.4105	1	3431900	+		35199	10531	17358	17435	41083	41083	18				0.053995538853769176
TVDAKTRCI	9	Unmodified	_TVDAKTRCI_					0	0	0			REV__ENSG00000171940|ENST00000371471|ZNF217	REV__ENSG00000171940|ENST00000371471|ZNF217	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.2984496951103	2	503.771134	1005.52771	3.2171	0.0016207	2.2664	0.0011418	5.4835	0.0027624	503.77241453434664	65.125	0.37791	66.524	66.285	66.663	1.3989					17	11	2	0	0	0	0.094078	1	27243	27243		18.135	3.5533	1	1362400	+		35200	11050	17359	17436	41084	41084					0.025172125657832112
TVDAPPPI	8	Unmodified	_TVDAPPPI_					0	0	0			REV__nc|ENSG00000104872|Q9NWS0-3|PIH1D1	REV__nc|ENSG00000104872|Q9NWS0-3|PIH1D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	405.2247497439384	2	405.223811	808.433069	0.17859	7.2369E-05	1.1004	0.00044592	1.279	0.00051829	405.22420683163654	16.916	0.15223	18.219	18.112	18.264	1.3023					6	4	2	0	0	0	0.87803	1	7038	7038		10.183	0	1	555670	+		35201	9153	17360	17437	41085	41085					0.021190220860944464
TVDAPPPI	8	Unmodified	_TVDAPPPI_					0	0	0			REV__nc|ENSG00000104872|Q9NWS0-3|PIH1D1	REV__nc|ENSG00000104872|Q9NWS0-3|PIH1D1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.1795226931572	2	405.223811	808.433069	0.17859	7.2369E-05	1.1004	0.00044592	1.279	0.00051829	405.22420683163654	16.916	0.15223	18.219	18.112	18.264	1.3023					6	4	2	0	0	0	2.3239	1	7008	7008		5.7604	0	1	555670	+		35202	9153	17360	17437	41086	41086					0.021190220860944464
TVDDIKKST	9	Unmodified	_TVDDIKKST_					0	0	0		ENST00000447263.1_1_1:39980824-39982159:+|nuORF;ENSG00000198754|ENST00000327582|OXCT2	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.7742797732353	2	503.774396	1005.53424	1.6644	0.0008385	-2.2055	-0.0011111	-0.54103	-0.00027256	503.77277760058956	70.891	0.28489	70.891	70.687	70.972	0					11	8	2	0	0	0	0.49082	1	29510	29510		15.847	1.2655	1	721610			35203	5076	17361	17438	41087	41087					0.03169428998137391
TVDDIKKST	9	Unmodified	_TVDDIKKST_					0	0	0		ENST00000447263.1_1_1:39980824-39982159:+|nuORF;ENSG00000198754|ENST00000327582|OXCT2	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	503.774396	1005.53424	2.4758	0.0012472	0.77023	0.00038802	3.246	0.0016353	503.774658731384	69.526	0.36705	70.892	70.729	71.096	1.3657	-0.0042824	0.0001304	NaN	15.847	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6477300			35204	5076	17361	17438							0.03169428998137391
TVDDIKKST	9	Unmodified	_TVDDIKKST_					0	0	0		ENST00000447263.1_1_1:39980824-39982159:+|nuORF;ENSG00000198754|ENST00000327582|OXCT2	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	ENST00000447263.1_1_1:39980824-39982159:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.774396	1005.53424	1.1453	0.00057698	0.83611	0.00042121	1.9814	0.00099819	503.7747783381236	69.052	0.45917	70.905	70.709	71.168	1.853	0.0086993	0.00019678	NaN	15.847	34	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9226900			35205	5076	17361	17438							0.03169428998137391
TVDKIFLIV	9	Unmodified	_TVDKIFLIV_					0	0	0		tr|A0A7D6VUD1|A0A7D6VUD1_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11130PE=4SV=1	tr|A0A7D6VUD1|A0A7D6VUD1_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11130PE=4SV=1	tr|A0A7D6VUD1|A0A7D6VUD1_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11130PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3274413943291	2	524.326068	1046.63758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.096	1	66.096	65.596	66.596	0								0	0	0	0.35665	1	27538	27538		13.042	1.4022	1				35206	16946	17362	17439	41088	41088					0.116129611766155
TVDLHRLTF	9	Unmodified	_TVDLHRLTF_					0	0	0			REV__ENST00000572956.5_1_16:8736388-8739997:+|nuORF	REV__ENST00000572956.5_1_16:8736388-8739997:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.7407104372978	2	551.306198	1100.59784	3.9717	0.0021896	-1.2529	-0.00069072	2.7189	0.0014989	551.3053008902682	92.292	0.54992	93.228	92.923	93.473	0.93623					30	16	2	0	0	0	0.11463	1	38862	38862		4.3292	2.2695	1	937270	+		35207	8692	17363	17440	41089	41089					0.05156834225863349
TVDNARIVL	9	Unmodified	_TVDNARIVL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000439811.1_1_6:112683280-112683757:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7930175662041	2	500.792924	999.571294	0.59316	0.00029705	-0.37316	-0.00018688	0.22	0.00011017	500.79262053523365	33.005	0.38379	34.283	34.083	34.467	1.2782					43	14	4	0	0	0	3.3414E-05	3	13841	13803;13841;13877		160.52	56.768	1	25397000			35208	1724	17364	17441	41090;41091;41092	41091					0.07149145334562945
TVDNARIVL	9	Unmodified	_TVDNARIVL_					0	0	0		ENSG00000111057|ENST00000388835|KRT18;ENST00000549078.5_1_12:53342924-53344195:+|nuORF;ENST00000458108.1_1_3:32300804-32301218:+|nuORF;ENST00000396959.2_1_3:12829511-12830132:-|nuORF;ENST00000439811.1_1_6:112683280-112683757:-|nuORF	ENSG00000111057|ENST00000388835|KRT18	ENSG00000111057|ENST00000388835|KRT18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7936889529228	2	500.792924	999.571294	0.60013	0.00030054	0.85884	0.0004301	1.459	0.00073064	500.79316937736104	32.472	0.41424	34.297	34.063	34.477	1.8246					41	14	4	0	0	0	8.9999E-05	3	13596	13556;13596;13633		147.06	43.311	1	22679000			35209	1724	17364	17441	41093;41094;41095	41094					0.07149145334562945
TVDTLKTLTA	10	Unmodified	_TVDTLKTLTA_					0	0	0		ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	ENSG00000092439|ENST00000646667|TRPM7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.7720825076103	2	531.805697	1061.59684	3.4019	0.0018092	0.10746	5.7149E-05	3.5094	0.0018663	531.8055404233152	74.319	0.85188	75.637	75.342	76.194	1.318					46	27	2	0	0	0	0.12461	1	31117	31117		10.074	5.7447	1	15376000			35210	1165	17365	17442	41096	41096					0.0685057506634621
TVEALHDLL	9	Unmodified	_TVEALHDLL_					0	0	0			REV__nc|ENSG00000148655|Q9H2I8|LRMDA	REV__nc|ENSG00000148655|Q9H2I8|LRMDA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.7813293337822	2	505.779482	1009.54441	2.7303	0.0013809	0.74471	0.00037666	3.475	0.0017576	505.7796508451824	76.203	0.40794	77.97	77.782	78.19	1.7672					21	12	3	0	0	0	0.34572	1	32014	32014		23.148	0	1	1601500	+		35211	10352	17366	17443	41097	41097					0.04002036723386482
TVEEKILQL	9	Unmodified	_TVEEKILQL_					0	0	0		ENST00000480701.1_1_1:117641440-117644143:+|nuORF;ENST00000492682.5_1_1:117640837-117644143:+|nuORF;MAN1A2-TTF2|3|fusion;MAN1A2-TTF2|1|fusion;ENSG00000116830|ENST00000369466|TTF2;MAN1A2-TTF2|2|fusion	ENST00000480701.1_1_1:117641440-117644143:+|nuORF	ENST00000480701.1_1_1:117641440-117644143:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8187744021416	2	536.816064	1071.61758	1.7034	0.00091439	2.8162	0.0015118	4.5196	0.0024262	536.8173299915233	50.258	0.27289	52.235	51.977	52.25	1.9772					20	8	3	0	0	0	0.15635	1	21008	21008		37.974	3.0419	1	7541100			35212	1989	17367	17444	41098	41098					0.08463165446005405
TVEEMPALVF	10	Unmodified	_TVEEMPALVF_					0	0	0			REV__tr|A0A553SQD7|A0A553SQD7_NIACItRNA-dihydrouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_24895PE=3SV=1	REV__tr|A0A553SQD7|A0A553SQD7_NIACItRNA-dihydrouridinesynthaseOS=NialliacirculansOX=1397GN=CEQ21_24895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.2889892458916	2	568.288825	1134.5631	2.5276	0.0014364	-1.1622	-0.00066048	1.3654	0.00077593	568.2883666561611	76.032	0.39697	77.326	76.974	77.371	1.2938					27	12	3	0	0	0	0.62746	1	31883	31883		21.747	5.8995	1	2869200	+		35213	15128	17368	17445	41099	41099					0.0011983030292412877
TVEESFCC	8	Unmodified	_TVEESFCC_					0	0	0			REV__ENSG00000101493|ENST00000443185|ZNF516	REV__ENSG00000101493|ENST00000443185|ZNF516	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1723510622978	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.715	1	81.715	81.215	82.215	0								0	0	0	1.0178	1	34037	34037		0.69038	0.69038	1		+		35214	9041	17369	17446	41100	41100					-0.1308575503933298
TVEESFCC	8	Unmodified	_TVEESFCC_					0	0	0			REV__ENSG00000101493|ENST00000443185|ZNF516	REV__ENSG00000101493|ENST00000443185|ZNF516	MSMS	GG20161007_CRH_Patient100_A02_01	1	459.1732055544853	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.035	1	84.035	83.535	84.535	0								0	0	0	1.0178	1	35019	35019		2.5775	1.8871	1		+		35215	9041	17369	17446	41101	41101					-0.1308575503933298
TVEKRYRAI	9	Unmodified	_TVEKRYRAI_					0	0	0			REV__tr|A0A7D6VRE0|A0A7D6VRE0_9CLOTRNA-bindingtranscriptionalaccessoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19060PE=4SV=1	REV__tr|A0A7D6VRE0|A0A7D6VRE0_9CLOTRNA-bindingtranscriptionalaccessoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.2889892458916	2	568.332747	1134.65094	2.5129	0.0014281	1.3888	0.00078928	3.9016	0.0022174	568.3333647909143	75.873	0.49194	77.167	76.85	77.341	1.2938					21	15	2	0	0	0	0.10591	1	31883	31883		12.532	1.7076	1	1008500	+		35216	15408	17370	17447	41102	41102					0.08900212008552444
TVEQPNQVN	9	Unmodified	_TVEQPNQVN_					0	0	0		TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant;nc|ENSG00000196367|Q9Y4A5-2|TRRAP;nc|ENSG00000196367|Q9Y4A5|TRRAP;ENSG00000196367|ENST00000456197|TRRAP;TRRAP|p.L2853Nfs*14|1|0.37|ENSG00000196367|chr7:98978847-98978848|-/AA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.7545654177666	2	514.753995	1027.49344	2.01	0.0010346	0.92776	0.00047757	2.9377	0.0015122	514.7541212005221	79.706	0.31008	79.706	79.485	79.795	0					15	9	2	0	0	0	0.37357	1	33177	33177		21.747	2.4897	1	759400			35217	4935	17371	17448	41103	41103					-0.019209123214750434
TVESHDKAI	9	Unmodified	_TVESHDKAI_					0	0	0		ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	ENSG00000164151|ENST00000296564|ICE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2624389529228	2	500.258914	998.503274	1.6454	0.00082313	4.4794	0.0022409	6.1248	0.003064	500.2614606058705	64.858	0.15483	66.786	66.709	66.864	1.928					8	4	2	0	0	0	0.44535	1	27212	27212		18.135	1.1927	1	2041000			35218	3754	17372	17449	41104	41104					0.003962756838859605
TVESHRKGCDT	11	Unmodified	_TVESHRKGCDT_					0	0	0		GDF2|p.T413Kfs*14|1|0.34|ENSG00000263761|chr10:47325731-47325732|-/AGAAGCACATCTTG|frameshift_variant;ENSG00000263761|ENST00000581492|GDF2	GDF2|p.T413Kfs*14|1|0.34|ENSG00000263761|chr10:47325731-47325732|-/AGAAGCACATCTTG|frameshift_variant	GDF2|p.T413Kfs*14|1|0.34|ENSG00000263761|chr10:47325731-47325732|-/AGAAGCACATCTTG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	616.7878295779228	2	616.788044	1231.56153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.15	1	58.118	57.618	58.618	1.9684								0	0	0	0.63765	1	23548	23548		18.146	0	1				35219	5430	17373	17450	41105	41105					-0.04498410733117453
TVESLINSL	9	Unmodified	_TVESLINSL_					0	0	0			REV__TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	REV__TEX10|p.E856Gfs*24|1|0.03|ENSG00000136891|chr9:100303741-100303742|-/TC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	488.2720825076103	2	488.27149	974.528426	1.7128	0.00083632	-0.26998	-0.00013182	1.4428	0.00070449	488.2721285705363	77.705	0.30865	77.705	77.564	77.873	0					13	9	2	0	0	0	0.46905	1	32355	32355		16.942	0	1	329220	+		35220	9999	17374	17451	41106	41106					0.040143304864727725
TVETLFKFV	9	Unmodified	_TVETLFKFV_					0	0	0			REV__tr|A0A7D6VYA6|A0A7D6VYA6_9CLOTCoproporphyrinogenIIIoxidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15060PE=4SV=1	REV__tr|A0A7D6VYA6|A0A7D6VYA6_9CLOTCoproporphyrinogenIIIoxidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.2461425662041	2	542.307875	1082.6012	2.554	0.001385	2.6843	0.0014557	5.2383	0.0028408	542.3096558454902	77.113	0.25635	78.394	78.217	78.474	1.2809					11	7	2	0	0	0	0.10591	1	32354	32354		7.9102	0	1	399960	+		35221	15559	17375	17452	41107	41107					0.06320084279923321
TVFAEIQGV	9	Unmodified	_TVFAEIQGV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MSMS	GG20161007_CRH_Patient100_A02_01	1	482.2632018923759	2	482.260925	962.507297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.119	1	58.119	57.619	58.619	0								0	0	0	0.30487	1	24247	24247		18.135	4.6271	1				35222	4724	17376	17453	41108	41108					0.02454365177618456
TVFDFLQGV	9	Unmodified	_TVFDFLQGV_					0	0	0		tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	tr|A0A7D6ZZ20|A0A7D6ZZ20_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2713500857353	2	513.26875	1024.52295	4.4632	0.0022908	-1.0429	-0.0005353	3.4202	0.0017555	513.2681569540715	93.488	0.51221	94.36	94.097	94.609	0.87176					35	15	3	0	0	0	0.5697	1	39295	39295		12.532	3.1841	1	3543300			35223	17204	17377	17454	41109	41109					0.011666516946661432
TVFHNGRTNL	10	Unmodified	_TVFHNGRTNL_					0	0	0		L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|191|1|anti-sense	L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|191|1|anti-sense	L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|191|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	579.8068115115166	2	579.804354	1157.59415	1.7756	0.0010295	2.873	0.0016658	4.6486	0.0026953	579.805732324251	77.172	0.40582	77.172	76.94	77.346	0					36	12	4	0	0	0	0.82019	1	32084	32084		10.074	10.074	1	4786700			35224	7763	17378	17455	41110	41110					0.021661644520463597
TVFKRFKII	9	Unmodified	_TVFKRFKII_					0	0	0		tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	tr|A0A7D7ADM5|A0A7D7ADM5_9CLOTPHdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23405PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3688842654228	2	576.368601	1150.72265	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.995	1	23.611	23.111	24.111	1.6158								0	0	0	0.42693	1	9177	9177		0.52476	0	1				35225	17327	17379	17456	41111	41111					0.15331751433086538
TVFLLIKW	8	Unmodified	_TVFLLIKW_					0	0	0		ENST00000399034.7_1_7:35946139-35946175:+|nuORF	ENST00000399034.7_1_7:35946139-35946175:+|nuORF	ENST00000399034.7_1_7:35946139-35946175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.3196899294853	2	510.318046	1018.62154	2.2996	0.0011736	1.8273	0.00093248	4.1269	0.002106	510.31938114214165	73.012	0.3149	73.337	73.179	73.494	0.32494					13	9	2	0	0	0	0.76103	1	30521	30521		24.674	3.8027	1	738880			35226	6331	17380	17457	41112	41112					0.11297299730370014
TVFRHHYIPYF	11	Unmodified	_TVFRHHYIPYF_					0	0	0		ABLIM2|p.S411T|1|0.17|ENSG00000163995|chr4:8020241-8020241|A/T|missense_variant	ABLIM2|p.S411T|1|0.17|ENSG00000163995|chr4:8020241-8020241|A/T|missense_variant	ABLIM2|p.S411T|1|0.17|ENSG00000163995|chr4:8020241-8020241|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	740.3797485232353	2	740.380229	1478.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.964	1	97.248	96.748	97.748	0.28442								0	0	0	0.63773	1	40798	40798		8.7454	0.58988	1				35227	12	17381	17458	41113	41113					0.025681454797449987
TVFVPRGLAI	10	Unmodified	_TVFVPRGLAI_					0	0	0			REV__tr|A0A7D6ZJ10|A0A7D6ZJ10_9CLOTtRNA-specific2-thiouridylaseMnmAOS=ClostridiumintestinaleOX=36845GN=mnmAPE=3SV=1	REV__tr|A0A7D6ZJ10|A0A7D6ZJ10_9CLOTtRNA-specific2-thiouridylaseMnmAOS=ClostridiumintestinaleOX=36845GN=mnmAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1651489138603	2	536.829309	1071.64407	3.1087	0.0016689	-4.1579	-0.0022321	-1.0492	-0.00056325	537.3295977005846	70.486	0.44875	71.839	71.584	72.033	1.3536					29	13	3	0	0	0	0.12493	1	29482	29482		3.5965	1.5367	1	2100100	+		35228	15667	17382	17459	41114	41114					0.11110899127993434
TVFVPRGLAI	10	Unmodified	_TVFVPRGLAI_					0	0	0			REV__tr|A0A7D6ZJ10|A0A7D6ZJ10_9CLOTtRNA-specific2-thiouridylaseMnmAOS=ClostridiumintestinaleOX=36845GN=mnmAPE=3SV=1	REV__tr|A0A7D6ZJ10|A0A7D6ZJ10_9CLOTtRNA-specific2-thiouridylaseMnmAOS=ClostridiumintestinaleOX=36845GN=mnmAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	536.829309	1071.64407	1.6068	0.00086256	-4.0035	-0.0021492	-2.3968	-0.0012867	537.3297895115697	72.178	0.15755	72.178	72.08	72.237	0	0.16946	0.00011977	NaN	3.5965	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	302440	+		35229	15667	17382	17459							0.11110899127993434
TVGERRLNV	9	Unmodified	_TVGERRLNV_					0	0	0			REV__ENSG00000206384|ENST00000358511|COL6A6	REV__ENSG00000206384|ENST00000358511|COL6A6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.7173339724541	2	522.301447	1042.58834	1.2796	0.00066834	0.98357	0.00051372	2.2632	0.0011821	522.3024585227656	68.842	0.38998	70.695	70.558	70.948	1.853					19	12	2	0	0	0	0.11463	1	28957	28957		4.3292	0	1	1815100	+		35230	11826	17383	17460	41115	41115					0.06875065940380409
TVGLNRLPIP	10	Unmodified	_TVGLNRLPIP_					0	0	0		ENST00000462494.5_1_7:5568445-5568514:-|nuORF	ENST00000462494.5_1_7:5568445-5568514:-|nuORF	ENST00000462494.5_1_7:5568445-5568514:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3326293826103	2	540.332216	1078.64988	1.7646	0.00095349	-0.98471	-0.00053207	0.77993	0.00042142	540.3319359797522	67.377	0.94784	67.7	67.366	68.313	0.32269					39	30	3	0	0	0	0.88314	1	28215	28215		3.2813	1.4371	1	1096000			35231	6679	17384	17461	41116	41116					0.11369997639667417
TVGSVDGH	8	Unmodified	_TVGSVDGH_					0	0	0		ENSG00000132664|ENST00000377603|POLR3F;ENST00000462997.5_1_20:18448220-18464199:+|nuORF	ENSG00000132664|ENST00000377603|POLR3F	ENSG00000132664|ENST00000377603|POLR3F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	771.3665649294853	1	771.363158	770.355882	1.7585	0.0013565	4.06	0.0031317	5.8185	0.0044882	771.3664494677511	79.462	0.3833	79.763	79.558	79.942	0.30047					24	11	3	0	0	0	0.87935	1	33258	33258		9.3474	0	1	1337500			35232	2544	17385	17462	41117	41117					-0.03848196130229553
TVGSVDGH	8	Unmodified	_TVGSVDGH_					0	0	0		ENSG00000132664|ENST00000377603|POLR3F;ENST00000462997.5_1_20:18448220-18464199:+|nuORF	ENSG00000132664|ENST00000377603|POLR3F	ENSG00000132664|ENST00000377603|POLR3F	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	771.363158	770.355882	1.878	0.0014486	3.6674	0.0028289	5.5453	0.0042775	771.366402871305	79.719	0.43311	79.719	79.453	79.887	0	-0.18424	-0.00051048	NaN	9.3474	22	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1339700			35233	2544	17385	17462							-0.03848196130229553
TVGVPGGV	8	Unmodified	_TVGVPGGV_					0	0	0			REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.5345947146416	2	343.197596	684.38064	0.47205	0.00016201	2.4727	0.00084863	2.9448	0.0010106	343.19837375301995	26.227	0.30195	26.488	26.352	26.654	0.26173					15	9	2	0	0	0	2.3239	1	11004	11004		0.79363	0	1	852150	+		35234	12160	17386	17463	41118	41118					0.025824837431514425
TVGVPGGV	8	Unmodified	_TVGVPGGV_					0	0	0			REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.5345641970634	2	343.197596	684.38064	0.13145	4.5113E-05	3.0794	0.0010569	3.2109	0.001102	343.1986919620334	24.987	0.36462	26.694	26.473	26.838	1.7076					18	11	2	0	0	0	2.3239	1	10396	10396		0.79363	0	1	1426800	+		35235	12160	17386	17463	41119	41119					0.025824837431514425
TVGVPGGV	8	Unmodified	_TVGVPGGV_					0	0	0			REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	REV__ENST00000255641.12_1_19:1980677-1981289:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	343.197596	684.38064	0.066092	2.2683E-05	3.8116	0.0013081	3.8777	0.0013308	343.1988719720212	25.333	0.3342	26.592	26.436	26.771	1.2594	0.00042226	0.00047497	NaN	0.79363	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1201600	+		35236	12160	17386	17463							0.025824837431514425
TVGVQPRLPL	10	Unmodified	_TVGVQPRLPL_					0	0	0			REV__ENST00000490187.1_1_20:25205773-25206230:+|nuORF	REV__ENST00000490187.1_1_20:25205773-25206230:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3350097537041	2	540.332216	1078.64988	1.5162	0.00081928	-1.485	-0.00080239	0.03125	1.6885E-05	540.3316965259384	67.303	0.99051	67.303	66.99	67.98	0					49	31	2	0	0	0	0.85604	1	28170	28170		6.2058	0.47393	1	928520	+		35237	13420	17387	17464	41120	41120					0.11369997639667417
TVHAWRRL	8	Unmodified	_TVHAWRRL_					0	0	0		ENST00000553932.5_1_14:39308043-39308142:-|nuORF	ENST00000553932.5_1_14:39308043-39308142:-|nuORF	ENST00000553932.5_1_14:39308043-39308142:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1400024294853	2	519.801417	1037.58828	2.0767	0.0010795	1.2662	0.00065819	3.3429	0.0017376	519.8028772152816	48.034	0.24929	49.422	49.272	49.521	1.388					15	7	3	0	0	0	2.3239	1	20048	20048		2.5775	0	1	1192600			35238	7284	17388	17465	41121	41121					0.07099110731041947
TVHAWRRL	8	Unmodified	_TVHAWRRL_					0	0	0		ENST00000553932.5_1_14:39308043-39308142:-|nuORF	ENST00000553932.5_1_14:39308043-39308142:-|nuORF	ENST00000553932.5_1_14:39308043-39308142:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.801417	1037.58828	2.6241	0.001364	0.99877	0.00051916	3.6229	0.0018832	519.8028776662436	47.536	0.27528	49.512	49.374	49.649	1.976	0.045077	-0.00016928	NaN	2.5775	14	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1204300			35239	7284	17388	17465							0.07099110731041947
TVHLLKKKLL	10	Unmodified	_TVHLLKKKLL_					0	0	0		ENSG00000255398|ENST00000528880|HCAR3	ENSG00000255398|ENST00000528880|HCAR3	ENSG00000255398|ENST00000528880|HCAR3	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2761413455009	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.541	1	83.811	83.311	84.311	0.27029								0	0	0	0.66254	1	34939	34939		0.15932	0	1				35240	5403	17389	17466	41122	41122					0.21848282529981589
TVHWRTHTGEK	11	Unmodified	_TVHWRTHTGEK_					0	0	0		nc|ENSG00000197566|Q9P2J8-2|ZNF624;ENST00000579528.1_1_17:16525604-16527848:-|nuORF;ENSG00000197566|ENST00000311331|ZNF624	nc|ENSG00000197566|Q9P2J8-2|ZNF624	nc|ENSG00000197566|Q9P2J8-2|ZNF624	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	338.6766540408134	4	338.677097	1350.67928	-0.41574	-0.0001408	-0.95194	-0.0003224	-1.3677	-0.0004632	338.6767794130336	12.138	0.40022	12.926	12.781	13.181	0.78751					20	12	3	0	0	0	0.98969	1	5035	5035		4.4062	0	1	867910			35241	5014	17390	17467	41123	41123					0.017969099178117176
TVIEGYLHI	9	Unmodified	_TVIEGYLHI_					0	0	0		IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant;ENSG00000140443|ENST00000650285|IGF1R	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	IGF1R|p.F1189Lfs*51|1|0.28|ENSG00000140443|chr15:98943031-98943032|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7911254763603	2	522.78985	1043.56515	1.4341	0.00074971	-0.90503	-0.00047314	0.52903	0.00027657	522.7896020917626	71.32	0.89718	73.144	72.547	73.445	1.824					68	28	4	0	0	0	0.34572	1	29765	29765		23.148	1.4018	1	37467000			35242	2916	17391	17468	41124	41124					0.04510627103036313
TVIEIVKDL	9	Unmodified	_TVIEIVKDL_					0	0	0			REV__nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	REV__nc|ENSG00000119326|Q9UBT7-3|CTNNAL1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	515.7396728396416	2	515.313158	1028.61176	3.2808	0.0016906	-1.155	-0.00059517	2.1258	0.0010955	515.3124916611898	65.164	0.18681	66.563	66.476	66.663	1.3989					7	5	2	0	0	0	0.10591	1	27309	27309		7.9102	0	1	510810	+		35243	9536	17392	17469	41125	41125					0.098600669343341
TVIGALLIYK	10	Unmodified	_TVIGALLIYK_					0	0	0		tr|A0A7D7AG41|A0A7D7AG41_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07630PE=3SV=1	tr|A0A7D7AG41|A0A7D7AG41_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07630PE=3SV=1	tr|A0A7D7AG41|A0A7D7AG41_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07630PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	364.2332946658134	3	364.23387	1089.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.244	1	68.567	68.067	69.067	0.32224								0	0	0	0.66227	1	28567	28567		0.62683	0	1				35244	17339	17393	17470	41126	41126					0.13852936584999043
TVIKISKAK	9	Unmodified	_TVIKISKAK_					0	0	0			REV__tr|A0A553SHE9|A0A553SHE9_NIACIHypoxanthinephosphoribosyltransferaseOS=NialliacirculansOX=1397GN=hptPE=3SV=1	REV__tr|A0A553SHE9|A0A553SHE9_NIACIHypoxanthinephosphoribosyltransferaseOS=NialliacirculansOX=1397GN=hptPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3340026736259	2	494.331685	986.648816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.59	1	104.65	104.15	105.15	0.056801								0	0	0	0.42693	1	44145	44145		0.45834	0	1		+		35245	14789	17394	17471	41127	41127					0.15495783270750962
TVIKISKAK	9	Unmodified	_TVIKISKAK_					0	0	0			REV__tr|A0A553SHE9|A0A553SHE9_NIACIHypoxanthinephosphoribosyltransferaseOS=NialliacirculansOX=1397GN=hptPE=3SV=1	REV__tr|A0A553SHE9|A0A553SHE9_NIACIHypoxanthinephosphoribosyltransferaseOS=NialliacirculansOX=1397GN=hptPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3333618044853	2	494.331685	986.648816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.52	1	104.69	104.19	105.19	0.1731								0	0	0	0.42693	1	44239	44239		0.45834	0	1		+		35246	14789	17394	17471	41128	41128					0.15495783270750962
TVINPEKVVI	10	Unmodified	_TVINPEKVVI_					0	0	0		ENSG00000165929|ENST00000435962|TC2N;nc|ENSG00000165929|Q8N9U0-2|TC2N	ENSG00000165929|ENST00000435962|TC2N	ENSG00000165929|ENST00000435962|TC2N	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.3430053591728	2	556.339707	1110.66486	2.0785	0.0011563	1.6983	0.0009448	3.7767	0.0021011	556.3409613278841	87.397	0.76992	87.397	87.259	88.029	0					44	26	3	0	0	0	0.82659	1	36581	36581		9.3831	1.2276	1	1976300			35247	3868	17395	17472	41129	41129					0.11395444716981729
TVISVPKEK	9	Unmodified	_TVISVPKEK_					0	0	0		tr|A0A553ST99|A0A553ST99_NIACIDUF917familyproteinOS=NialliacirculansOX=1397GN=CEQ21_04360PE=4SV=1	tr|A0A553ST99|A0A553ST99_NIACIDUF917familyproteinOS=NialliacirculansOX=1397GN=CEQ21_04360PE=4SV=1	tr|A0A553ST99|A0A553ST99_NIACIDUF917familyproteinOS=NialliacirculansOX=1397GN=CEQ21_04360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.8060485720634	2	500.8055	999.596446	1.5766	0.00078955	1.2523	0.00062718	2.8289	0.0014167	500.8059644828991	39.765	0.18249	39.765	39.669	39.852	0					7	5	2	0	0	0	0.25667	1	16680	16680		27.629	8.3718	1	417720			35248	16644	17396	17473	41130	41130					0.09663200137140393
TVITKILTK	9	Unmodified	_TVITKILTK_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.8408080935478	2	508.839342	1015.66413	2.9723	0.0015124	-0.44334	-0.00022559	2.5289	0.0012868	508.8388997563637	106.1	0.1674	106.16	106.06	106.23	0.05455					25	7	5	0	0	0	0.84195	1	45115	45115		1.6526	0	1	194020000	+		35249	11129	17397	17474	41131	41131					0.156926500679333
TVITKILTK	9	Unmodified	_TVITKILTK_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.8407470583916	2	508.839342	1015.66413	3.4348	0.0017478	-1.763	-0.00089707	1.6719	0.00085071	508.83837749283936	106.05	0.19858	106.21	106.11	106.31	0.16174					38	10	5	0	0	0	0.84195	2	45227	45227;45308		1.6526	0	1	847940000	+		35250	11129	17397	17474	41132;41133	41132					0.156926500679333
TVITKILTK	9	Unmodified	_TVITKILTK_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.8408691287041	2	508.839342	1015.66413	3.4331	0.0017469	-2.3927	-0.0012175	1.0404	0.00052939	508.83822073388643	107.57	0.28015	107.73	107.58	107.86	0.15796					51	14	5	0	0	0	0.83213	1	46216	46216		2.0598	0	1	2911600000	+		35251	11129	17397	17474	41134	41134					0.156926500679333
TVITKILTK	9	Unmodified	_TVITKILTK_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	508.839342	1015.66413	2.9723	0.0015124	-0.44334	-0.00022559	2.5289	0.0012868	508.8388997563637	106.1	0.1674	106.16	106.06	106.23	0.05455	-0.027234	0.00037271	NaN	1.6526	25	7	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194020000	+		35252	11129	17397	17474							0.156926500679333
TVITKILTK	9	Unmodified	_TVITKILTK_					0	0	0			REV__ENSG00000174697|ENST00000308868|LEP	REV__ENSG00000174697|ENST00000308868|LEP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	508.839342	1015.66413	3.4331	0.0017469	-2.3927	-0.0012175	1.0404	0.00052939	508.83822073388643	107.57	0.28015	107.73	107.58	107.86	0.15796	-0.017136	-0.00021457	NaN	2.0598	51	14	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2911600000	+		35253	11129	17397	17474							0.156926500679333
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.3286010622978	2	473.326402	944.638252	1.7716	0.00083854	1.843	0.00087236	3.6146	0.0017109	473.3272530849256	106.2	0.17036	106.2	106.11	106.28	0					22	8	4	0	0	0	0.89008	1	45243	45243		2.5775	0	1	113020000	+		35254	10924	17398	17475	41135	41135					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.3290588259697	2	473.326402	944.638252	1.7715	0.0008385	0.096864	4.5848E-05	1.8684	0.00088434	473.32637124553355	107.75	0.23578	107.75	107.62	107.86	0					43	12	5	0	0	0	0.89008	1	46233	46233		2.5775	0	1	823530000	+		35255	10924	17398	17475	41136	41136					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.3277465701103	2	473.326402	944.638252	3.5029	0.001658	-0.58398	-0.00027641	2.9189	0.0013816	473.3261388400253	106.16	0.16299	106.21	106.12	106.29	0.05455					14	7	2	0	0	0	0.89008	1	45157	45157		2.5775	0	1	120960000	+		35256	10924	17398	17475	41137	41137					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.3282958865166	2	473.326402	944.638252	3.5048	0.0016589	-1.4654	-0.0006936	2.0395	0.00096534	473.3256712607502	107.73	0.23581	107.78	107.66	107.89	0.052452					44	12	5	0	0	0	0.89008	1	46114	46114		2.5775	0	1	768480000	+		35257	10924	17398	17475	41138	41138					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3278381228447	2	473.326402	944.638252	3.3015	0.0015627	-0.58984	-0.00027919	2.7117	0.0012835	473.3260883800726	106.13	0.21612	106.29	106.19	106.41	0.15781					39	11	5	0	0	0	0.89178	1	45356	45356		0.69038	0	1	940180000	+		35258	10924	17398	17475	41139	41139					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3290588259697	2	473.326402	944.638252	3.3015	0.0015627	-1.4204	-0.00067231	1.8811	0.00089037	473.3257118926232	107.71	0.19872	107.87	107.73	107.93	0.15781					33	10	4	0	0	0	0.89008	1	46358	46358		2.5775	0	1	830220000	+		35259	10924	17398	17475	41140	41140					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3275329470634	2	473.326402	944.638252	3.5094	0.0016611	-1.9006	-0.0008996	1.6088	0.00076149	473.3256146074753	106.1	0.23237	106.26	106.17	106.4	0.16174					31	12	5	0	0	0	0.89008	2	45278	45278;45353		2.5775	0	1	819480000	+		35260	10924	17398	17475	41141;41142	41141					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3292419314384	2	473.326402	944.638252	3.5067	0.0016598	-2.3161	-0.0010963	1.1906	0.00056352	473.3252922602171	107.68	0.2194	107.84	107.72	107.94	0.15796					34	11	4	0	0	0	0.89008	1	46287	46287		2.5775	0	1	744630000	+		35261	10924	17398	17475	41143	41143					0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	473.326402	944.638252	1.7716	0.00083854	1.843	0.00087236	3.6146	0.0017109	473.3272530849256	106.2	0.17036	106.2	106.11	106.28	0	0.035117	0.0012799	NaN	2.5775	22	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	113020000	+		35262	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	473.326402	944.638252	3.5048	0.0016589	-1.4654	-0.0006936	2.0395	0.00096534	473.3256712607502	107.73	0.23581	107.78	107.66	107.89	0.052452	-0.030174	-0.00020535	NaN	2.5775	44	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	768480000	+		35263	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	473.326402	944.638252	3.5029	0.001658	-0.58398	-0.00027641	2.9189	0.0013816	473.3261388400253	106.16	0.16299	106.21	106.12	106.29	0.05455	0.046711	-0.0010176	NaN	2.5775	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	120960000	+		35264	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	473.326402	944.638252	3.3015	0.0015627	-1.4204	-0.00067231	1.8811	0.00089037	473.3257118926232	107.71	0.19872	107.87	107.73	107.93	0.15781	0.063974	-0.00016278	NaN	2.5775	33	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	830220000	+		35265	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	473.326402	944.638252	3.3016	0.0015627	-0.4252	-0.00020126	2.8764	0.0013615	473.3271581462058	105.97	0.062355	106.13	106.1	106.16	0.15859	-0.041667	-0.00086733	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7029800	+		35266	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	473.326402	944.638252	3.5067	0.0016598	-2.3161	-0.0010963	1.1906	0.00056352	473.3252922602171	107.68	0.2194	107.84	107.72	107.94	0.15796	0.028741	-0.0010107	NaN	2.5775	34	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	744630000	+		35267	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	473.326402	944.638252	3.5094	0.0016611	-1.9006	-0.0008996	1.6088	0.00076149	473.3256146074753	106.1	0.23237	106.26	106.17	106.4	0.16174	-0.01315	-0.00066522	NaN	2.5775	31	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	819480000	+		35268	10924	17398	17475							0.16371800616320797
TVITKKKK	8	Unmodified	_TVITKKKK_					0	0	0			REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	REV__ENST00000459775.5_1_2:85848673-85875928:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	473.326402	944.638252	3.5166	0.0016645	-2.7658	-0.0013091	0.75078	0.00035537	473.325383430314	105.96	0.081306	106.13	106.07	106.15	0.16569	-0.04016	-0.0030831	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5718200	+		35269	10924	17398	17475							0.16371800616320797
TVKAKITIV	9	Unmodified	_TVKAKITIV_					0	0	0			REV__nc|ENSG00000172497|Q8WYK0-2|ACOT12	REV__nc|ENSG00000172497|Q8WYK0-2|ACOT12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.6463500857353	1	972.645194	971.637917	2.7752	0.0026993	-0.81309	-0.00079085	1.9621	0.0019084	972.644130318472	107.69	0.23943	107.74	107.6	107.84	0.052452					42	12	5	0	0	0	0.84963	1	46155	46155		0.6015	0	1	665770000	+		35270	11069	17399	17476	41144	41144					0.15096380896454775
TVKAKITIV	9	Unmodified	_TVKAKITIV_					0	0	0			REV__nc|ENSG00000172497|Q8WYK0-2|ACOT12	REV__nc|ENSG00000172497|Q8WYK0-2|ACOT12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	972.6465942263603	1	972.645194	971.637917	2.9176	0.0028378	-1.5488	-0.0015064	1.3688	0.0013314	972.6434897246511	107.66	0.23687	107.82	107.68	107.92	0.15781					47	12	5	0	0	0	0.84963	1	46319	46319		0.6015	0	1	2833200000	+		35271	11069	17399	17476	41145	41145					0.15096380896454775
TVKKAEAL	8	Unmodified	_TVKKAEAL_					0	0	0			REV__ENST00000459751.1_1_10:13234503-13237290:+|nuORF	REV__ENST00000459751.1_1_10:13234503-13237290:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2655822634697	2	430.26601	858.517468	1.6315	0.000702	-1.0217	-0.00043962	0.6098	0.00026238	430.2650579122892	69.961	0.34401	70.283	70.098	70.442	0.32224					21	10	3	0	0	0	0.89178	1	29279	29279		0.69038	0	1	1425800	+		35272	13182	17400	17477	41146	41146					0.08254972902830104
TVKLKKTK	8	Unmodified	_TVKLKKTK_					0	0	0			REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.3271362185478	2	473.326402	944.638252	3.5048	0.0016589	-1.4654	-0.0006936	2.0395	0.00096534	473.3256712607502	107.73	0.23581	107.78	107.66	107.89	0.052452					44	12	5	0	0	0	0.89198	1	46180	46180		0	0	1	768480000	+		35273	8232	17401	17478	41147	41147					0.1637180061630943
TVKLKKTK	8	Unmodified	_TVKLKKTK_					0	0	0			REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.3268615603447	2	473.326402	944.638252	3.3015	0.0015627	-1.4204	-0.00067231	1.8811	0.00089037	473.3257118926232	107.71	0.19872	107.87	107.73	107.93	0.15781					33	10	4	0	0	0	0.89198	1	46424	46424		0	0	1	830220000	+		35274	8232	17401	17478	41148	41148					0.1637180061630943
TVKLKKTK	8	Unmodified	_TVKLKKTK_					0	0	0			REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	REV__chr10:52974800-52975740|202|45.85|0.69|6.05|-|2|LINC02672,LINC02672|2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.3268005251884	2	473.326402	944.638252	3.5067	0.0016598	-2.3161	-0.0010963	1.1906	0.00056352	473.3252922602171	107.68	0.2194	107.84	107.72	107.94	0.15796					34	11	4	0	0	0	0.89198	1	46358	46358		0	0	1	744630000	+		35275	8232	17401	17478	41149	41149					0.1637180061630943
TVKLKTEKF	9	Unmodified	_TVKLKTEKF_					0	0	0		ENST00000357308.8_1_2:69552779-69552845:-|nuORF	ENST00000357308.8_1_2:69552779-69552845:-|nuORF	ENST00000357308.8_1_2:69552779-69552845:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3335449099541	2	547.334424	1092.6543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.932	1	48.908	48.408	49.408	1.976								0	0	0	0.42693	1	19658	19658		2.3027	0	1				35276	5998	17402	17479	41150	41150					0.11167462062553568
TVKQKQKAT	9	Unmodified	_TVKQKQKAT_					0	0	0			REV__nc|ENSG00000283228|O00305-4|CACNB4	REV__nc|ENSG00000283228|O00305-4|CACNB4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3157226443291	2	516.314023	1030.61349	2.5624	0.001323	1.494	0.00077135	4.0564	0.0020944	516.3146843357589	83.761	0.7395	84.031	83.739	84.478	0.27029					78	23	6	0	0	0	0.84195	1	34958	34958		1.6526	0.32309	1	143450000	+		35277	11351	17403	17480	41151	41151					0.09941120742928433
TVKSQPNVTL	10	Unmodified	_TVKSQPNVTL_					0	0	0			REV__nc|ENSG00000055957|P19827-2|ITIH1	REV__nc|ENSG00000055957|P19827-2|ITIH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8126098513603	2	543.811313	1085.60807	1.7916	0.00097432	-1.7442	-0.00094853	0.04742	2.5788E-05	543.809886010426	46.517	0.45644	48.488	48.315	48.771	1.9703					26	14	3	0	0	0	0.45795	1	19472	19472		29.841	6.0508	1	1569100	+		35278	8637	17404	17481	41152	41152					0.06869397160471635
TVKVDLYKV	9	Unmodified	_TVKVDLYKV_					0	0	0			REV__tr|A0A7D6ZIY7|A0A7D6ZIY7_9CLOTPpx/GppAfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_09095PE=4SV=1	REV__tr|A0A7D6ZIY7|A0A7D6ZIY7_9CLOTPpx/GppAfamilyphosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_09095PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1898071169853	2	532.82115	1063.62775	0.71864	0.00038291	-0.92585	-0.00049331	-0.20721	-0.00011041	532.820688769032	57.826	0.36536	59.795	59.628	59.993	1.969					29	12	3	0	0	0	0.11518	1	24325	24325		7.2892	0	1	7503000	+		35279	15666	17405	17482	41153	41153					0.09847773171213703
TVKWDESLL	9	Unmodified	_TVKWDESLL_					0	0	0			REV__ENST00000479182.5_1_3:113003463-113005706:+|nuORF	REV__ENST00000479182.5_1_3:113003463-113005706:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.7923461794853	2	545.792589	1089.57063	1.6388	0.00089443	-1.0586	-0.0005778	0.58013	0.00031663	545.791342282985	57.669	0.40903	57.669	57.536	57.945	0					26	12	3	0	0	0	0.48482	1	24051	24051		16.149	0	1	1557100	+		35280	13333	17406	17483	41154	41154					0.029423058948623293
TVKYLLDIG	9	Unmodified	_TVKYLLDIG_					0	0	0		ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	ENSG00000132623|ENST00000378392|ANKEF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2995788455009	2	511.30005	1020.58555	1.8368	0.00093917	-0.61244	-0.00031314	1.2244	0.00062603	511.29975872264623	39.142	0.3431	40.978	40.817	41.16	1.8366					21	10	3	0	0	0	0.22154	1	16401	16401		30.637	0	1	2357300			35281	2542	17407	17484	41155	41155					0.07607797762864266
TVLAGTLLA	9	Unmodified	_TVLAGTLLA_					0	0	0			REV__ENSG00000171451|ENST00000310045|DSEL	REV__ENSG00000171451|ENST00000310045|DSEL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	858.5298339724541	1	858.529495	857.522219	1.3351	0.0011462	-1.7476	-0.0015003	-0.41245	-0.0003541	858.5282420911125	70.4	0.27018	70.723	70.591	70.861	0.32224					13	8	2	0	0	0	0.10294	1	29479	29479		48.346	0	1	887030	+		35282	11025	17408	17485	41156	41156					0.08775857045611701
TVLALPLREGV	11	Unmodified	_TVLALPLREGV_					0	0	0		ENSG00000168754|ENST00000490605|FAM178B	ENSG00000168754|ENST00000490605|FAM178B	ENSG00000168754|ENST00000490605|FAM178B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.3146850466728	2	584.358431	1166.70231	1.8383	0.0010742	-1.6769	-0.0009799	0.1614	9.4314E-05	584.357190659261	71.61	1.0741	72.951	72.392	73.467	1.3415					54	34	2	0	0	0	0.14606	1	29850	29850		12.241	8.9593	1	2521500			35283	4050	17409	17486	41157	41157					0.12562535982578993
TVLELNEKI	9	Unmodified	_TVLELNEKI_					0	0	0		ENSG00000230561|ENST00000514853|CCDC192;nc|ENSG00000230561|P0DO97|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	ENSG00000230561|ENST00000514853|CCDC192	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8018066287041	2	529.808239	1057.60193	2.0339	0.0010776	-0.99068	-0.00052487	1.0432	0.00055268	529.8076908124594	63.683	0.77197	64.012	63.725	64.497	0.32899					63	24	4	0	0	0	0.44512	1	26849	26849		18.146	0	1	28401000			35284	5304	17410	17487	41158	41158					0.0754287892893899
TVLEQVLPI	9	Unmodified	_TVLEQVLPI_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3069030642509	2	506.307875	1010.6012	1.9385	0.00098146	-0.40031	-0.00020268	1.5382	0.00077878	506.30661717711655	78.659	0.15763	78.659	78.535	78.693	0					10	4	3	0	0	0	0.083604	1	32737	32737		54.774	22.468	1	1370000			35285	2510	17411	17488	41159	41159					0.09632084279917308
TVLEQVLPI	9	Unmodified	_TVLEQVLPI_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.3084899783134	2	506.307875	1010.6012	2.1346	0.0010808	-1.1734	-0.00059411	0.96116	0.00048664	506.3074997774661	78.254	0.384	78.563	78.323	78.707	0.30933					22	11	3	0	0	0	0.059546	2	32736	32691;32736		64.236	24.279	1	2059900			35286	2510	17411	17488	41160;41161	41161					0.09632084279917308
TVLEQVLPI	9	Unmodified	_TVLEQVLPI_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3099548220634	2	506.307875	1010.6012	2.8048	0.0014201	0.26607	0.00013471	3.0709	0.0015548	506.3082131977966	77.246	0.44676	78.526	78.281	78.728	1.2809					33	13	3	0	0	0	0.037761	3	32377	32377;32425;32483		78.149	18.729	1	5853400			35287	2510	17411	17488	41162;41163;41164	41162					0.09632084279917308
TVLEQVLPI	9	Unmodified	_TVLEQVLPI_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.3094360232353	2	506.307875	1010.6012	2.1463	0.0010867	0.58811	0.00029776	2.7344	0.0013844	506.3081114619105	76.73	0.4482	78.498	78.288	78.736	1.7672					32	13	3	0	0	0	0.037761	2	32167	32167;32259		78.149	20.671	1	5601800			35288	2510	17411	17488	41165;41166	41165					0.09632084279917308
TVLGVVQN	8	Unmodified	_TVLGVVQN_					0	0	0			REV__ENST00000565092.6_1_16:1496634-1499128:-|nuORF	REV__ENST00000565092.6_1_16:1496634-1499128:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2416259646416	2	415.242535	828.470518	0.47144	0.00019576	-3.1546	-0.0013099	-2.6831	-0.0011141	415.24112892526693	70.132	0.40575	70.132	69.897	70.303	0					32	12	3	0	0	0	0.89051	1	29246	29246		2.3027	0	1	7687400	+		35289	9100	17412	17489	41167	41167					0.04942113351705757
TVLKGVGG	8	Unmodified	_TVLKGVGG_					0	0	0			REV__SUGP2|p.D303Vfs*22|1|0.07|ENSG00000064607|chr19:19025440-19025441|-/TCACAGATGCAATCATAGGTCA|frameshift_variant	REV__SUGP2|p.D303Vfs*22|1|0.07|ENSG00000064607|chr19:19025440-19025441|-/TCACAGATGCAATCATAGGTCA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.7285034060478	2	365.726521	729.438489	0.15588	5.7009E-05	1.2123	0.00044338	1.3682	0.00050039	365.7270468453077	22.382	0.15101	23.997	23.89	24.041	1.6158					7	4	2	0	0	0	0.88055	1	9337	9337		8.5933	0	1	496120	+		35290	8661	17413	17490	41168	41168					0.06294745668583346
TVLKGVGG	8	Unmodified	_TVLKGVGG_					0	0	0			REV__SUGP2|p.D303Vfs*22|1|0.07|ENSG00000064607|chr19:19025440-19025441|-/TCACAGATGCAATCATAGGTCA|frameshift_variant	REV__SUGP2|p.D303Vfs*22|1|0.07|ENSG00000064607|chr19:19025440-19025441|-/TCACAGATGCAATCATAGGTCA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	365.2113525271416	2	365.726521	729.438489	0.15588	5.7009E-05	1.2123	0.00044338	1.3682	0.00050039	365.7270468453077	22.382	0.15101	23.997	23.89	24.041	1.6158					7	4	2	0	0	0	2.3239	1	9306	9306		2.3027	0	1	496120	+		35291	8661	17413	17490	41169	41169					0.06294745668583346
TVLLLLFV	8	Unmodified	_TVLLLLFV_					0	0	0		ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	ENSG00000150637|ENST00000582621|CD226	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1725952029228	2	459.307147	916.599741	2.2257	0.0010223	-0.34174	-0.00015697	1.8839	0.00086529	459.3075720360265	83.169	0.25395	84.806	84.726	84.98	1.6379					11	7	2	0	0	0	2.3239	1	34907	34907		0.6015	0	1	985580			35292	3269	17414	17491	41170	41170					0.13810494981794363
TVLNAVVLSV	10	Unmodified	_TVLNAVVLSV_					0	0	0		ENST00000476258.5_1_17:73132134-73132194:-|nuORF	ENST00000476258.5_1_17:73132134-73132194:-|nuORF	ENST00000476258.5_1_17:73132134-73132194:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.8144409060478	2	507.813325	1013.6121	2.7439	0.0013934	0.41991	0.00021323	3.1638	0.0016066	507.81322498446	85.275	0.44034	85.275	85.068	85.508	0					36	13	4	0	0	0	0.81324	1	35607	35607		10.824	0	1	8714600			35293	6786	17415	17492	41171	41171					0.1058348665419544
TVLPGLTYL	9	Unmodified	_TVLPGLTYL_					0	0	0		ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	488.7881957888603	2	488.789318	975.564084	2.1072	0.00103	-4.0362	-0.0019729	-1.9291	-0.0009429	488.7870500121922	90.828	0.34852	90.828	90.682	91.031	0					17	10	2	0	0	0	0.13873	1	37969	37969		39.957	0	1	1443000			35294	4576	17416	17493	41172	41172					0.07532412734121863
TVLPLQEGL	9	Unmodified	_TVLPLQEGL_					0	0	0			REV__ENST00000512902.5_1_3:129585935-129599355:-|nuORF	REV__ENST00000512902.5_1_3:129585935-129599355:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.2863342165947	2	485.2844	968.554247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.609	1	70.932	70.432	71.432	0.32327								0	0	0	0.40188	1	29558	29558		8.5933	0	1		+		35295	13536	17417	17494	41173	41173					0.06871224728774905
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7964355349541	2	491.795269	981.575986	1.1763	0.00057851	2.0357	0.0010012	3.2121	0.0015797	491.7959331921709	33.039	0.45241	33.039	32.844	33.296	0					36	15	3	0	0	0	0.89008	1	13900	13900		2.5775	0	1	3732700	+		35296	9241	17418	17495	41174	41174					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2001220583916	3	328.199272	981.575986	0.6417	0.0002106	1.7282	0.00056718	2.3699	0.00077779	328.19987610102856	32.434	0.83593	32.728	32.123	32.959	0.29431					90	26	5	0	0	0	0.88663	2	13575	13575;13614		3.2813	0	1	78002000	+		35297	9241	17418	17495	41175;41176	41175					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7955505251884	2	491.795269	981.575986	1.9414	0.00095477	1.2519	0.00061569	3.1933	0.0015705	491.79544183725363	32.434	0.49192	32.729	32.497	32.989	0.29431					28	15	2	0	0	0	0.89008	1	13659	13659		2.5775	0	1	5856400	+		35298	9241	17418	17495	41177	41177					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7960693240166	2	491.795269	981.575986	1.9608	0.0009643	0.17723	8.7162E-05	2.138	0.0010515	491.79495883205124	32.83	0.31792	33.124	32.959	33.276	0.29431					17	11	2	0	0	0	0.88663	2	13763	13763;13813		4.756	0	1	3581200	+		35299	9241	17418	17495	41178;41179	41178					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1998779177666	3	328.199272	981.575986	0.66165	0.00021715	0.53961	0.0001771	1.2013	0.00039425	328.19942166780146	32.83	0.34619	33.124	32.959	33.305	0.29431					52	12	5	0	0	0	0.88663	2	13783	13783;13825		6.2058	0	1	80397000	+		35300	9241	17418	17495	41180;41181	41180					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	491.7966491580009	2	491.795269	981.575986	1.9852	0.00097631	1.8524	0.000911	3.8376	0.0018873	491.79585582033076	33.321	0.5457	33.618	33.307	33.853	0.29701					37	17	3	0	0	0	0.88663	1	13927	13927		4.756	0	1	2919700	+		35301	9241	17418	17495	41182	41182					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2003356814384	3	328.199272	981.575986	-0.55024	-0.00018059	2.5382	0.00083303	1.988	0.00065244	328.20012498687714	31.236	0.71529	32.517	32.057	32.773	1.2813					81	22	5	0	0	0	0.88663	2	13068	13068;13105		3.2813	0	1	77331000	+		35302	9241	17418	17495	41183;41184	41183					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1999999880791	3	328.199272	981.575986	-0.59112	-0.00019401	2.0316	0.00066675	1.4404	0.00047275	328.1999573456671	31.681	0.39882	32.963	32.773	33.172	1.2813					51	12	5	0	0	0	0.88663	1	13296	13296		3.2813	0	1	84296000	+		35303	9241	17418	17495	41185	41185					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1988098025322	3	328.199272	981.575986	-0.63489	-0.00020837	1.2428	0.00040788	0.60791	0.00019951	328.19963786516615	32.144	0.68638	33.426	33.141	33.827	1.2813					82	23	5	0	0	0	0.88163	1	13376	13376		9.3831	0	1	112710000	+		35304	9241	17418	17495	41186	41186					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1999694705009	3	328.199272	981.575986	0.25972	8.524E-05	1.1814	0.00038773	1.4411	0.00047297	328.199639387605	30.652	0.78038	32.467	31.954	32.734	1.8151					92	25	5	0	0	0	0.88663	2	12812	12812;12849		3.2813	0	1	76160000	+		35305	9241	17418	17495	41187;41188	41187					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7958251833916	2	491.795269	981.575986	0.97628	0.00048013	1.699	0.00083554	2.6752	0.0013157	491.7956435095711	30.755	0.47204	32.57	32.262	32.734	1.8151					34	15	3	0	0	0	0.88663	1	12902	12902		4.756	0	1	1962500	+		35306	9241	17418	17495	41189	41189					0.08446074267999393
TVLPRFHL	8	Unmodified	_TVLPRFHL_					0	0	0			REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	REV__ENST00000493154.1_1_10:24889621-24896510:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1997558474541	3	328.199272	981.575986	0.27476	9.0178E-05	0.81979	0.00026905	1.0946	0.00035923	328.19947765507453	31.086	0.35972	32.91	32.744	33.103	1.8246					49	11	5	0	0	0	0.88663	2	13019	13019;13058		3.2813	0	1	78445000	+		35307	9241	17418	17495	41190;41191	41190					0.08446074267999393
TVLQELINV	9	Unmodified	_TVLQELINV_					0	0	0		ENSG00000138160|ENST00000260731|KIF11	ENSG00000138160|ENST00000260731|KIF11	ENSG00000138160|ENST00000260731|KIF11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.7550536990166	2	514.802957	1027.59136	2.8124	0.0014478	-3.6957	-0.0019025	-0.88327	-0.00045471	514.801181171852	78.092	0.32827	79.373	79.259	79.587	1.2809					16	10	2	0	0	0	0.1006	1	32771	32771		15.847	2.3393	1	798130			35308	2818	17419	17496	41192	41192					0.0786689627452688
TVLSSRVGR	9	Unmodified	_TVLSSRVGR_					0	0	0			REV__ENST00000552544.5_1_12:52463840-52464035:+|nuORF	REV__ENST00000552544.5_1_12:52463840-52464035:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7910949587822	2	487.790715	973.566878	2.6554	0.0012953	1.2767	0.00062277	3.9321	0.001918	487.7912227687631	66.344	1.0126	66.669	66.083	67.096	0.32449					68	31	3	0	0	0	0.83213	1	27705	27705		2.0598	0	1	3131100	+		35309	12470	17420	17497	41193	41193					0.07903680911670108
TVLSTISSV	9	Unmodified	_TVLSTISSV_					0	0	0		tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	906.5182983279228	1	906.514239	905.506963	1.9895	0.0018035	0.12843	0.00011642	2.1179	0.0019199	906.5141852146718	66.48	0.28544	66.804	66.653	66.939	0.32449					18	8	3	0	0	0	0.037761	1	27854	27854		78.149	0	1	955260			35310	16190	17421	17498	41194	41194					0.0504294545777384
TVLSTISSV	9	Unmodified	_TVLSTISSV_					0	0	0		tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	906.5155517458916	1	906.514239	905.506963	2.6465	0.0023991	0.34074	0.00030888	2.9872	0.002708	906.5146158033934	65.248	0.37303	66.647	66.476	66.849	1.3989					25	11	3	0	0	0	0.018723	1	27410	27410		100.37	7.5494	1	3211100			35311	16190	17421	17498	41195	41195					0.0504294545777384
TVLSTISSV	9	Unmodified	_TVLSTISSV_					0	0	0		tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	906.5159179568291	1	906.514239	905.506963	1.6779	0.0015211	0.2945	0.00026696	1.9724	0.001788	906.5143482705369	64.807	0.3754	66.735	66.551	66.926	1.928					21	11	2	0	0	0	0.018723	1	27231	27231		100.37	0	1	1912100			35312	16190	17421	17498	41196	41196					0.0504294545777384
TVLTALKKL	9	Unmodified	_TVLTALKKL_					0	0	0		tr|A0A553STL8|A0A553STL8_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05340PE=3SV=1	tr|A0A553STL8|A0A553STL8_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05340PE=3SV=1	tr|A0A553STL8|A0A553STL8_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05340PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.8367187380791	2	493.83406	985.653567	3.1636	0.0015623	3.405	0.0016815	6.5687	0.0032438	493.8357387427795	109.47	0.72482	109.63	109.29	110.01	0.15898					62	29	4	0	0	0	0.83213	1	47560	47560		2.0598	0	1	11551000			35313	16658	17422	17499	41197	41197					0.1601666741352119
TVLTIGLVKI	10	Unmodified	_TVLTIGLVKI_					0	0	0		tr|A0A7D6ZGY2|A0A7D6ZGY2_9CLOTDUF2680domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20880PE=4SV=1	tr|A0A7D6ZGY2|A0A7D6ZGY2_9CLOTDUF2680domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20880PE=4SV=1	tr|A0A7D6ZGY2|A0A7D6ZGY2_9CLOTDUF2680domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20880PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.3167602419853	2	528.854993	1055.69543	2.3243	0.0012292	0.58767	0.00031079	2.912	0.00154	528.8553712948407	40.812	0.18763	42.138	42.054	42.241	1.3254					10	5	2	0	0	0	0.125	1	17137	17137		10.074	2.1638	1	395660			35314	17077	17423	17500	41198	41198					0.16981223102038712
TVLTRSKR	8	Unmodified	_TVLTRSKR_					0	0	0		nc|ENSG00000165304|Q14680-3|MELK;nc|ENSG00000165304|Q14680-4|MELK;chr9:36589652-36597222|407|15.49|0.38|5.34|+|ENST00000536987|MELK,MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-2|MELK;nc|ENSG00000165304|Q14680-8|MELK;nc|ENSG00000165304|Q14680-7|MELK;nc|ENSG00000165304|Q14680-6|MELK;ENSG00000165304|ENST00000298048|MELK	nc|ENSG00000165304|Q14680-3|MELK	nc|ENSG00000165304|Q14680-3|MELK	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.8020507693291	2	480.801083	959.587613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.754	1	78.754	78.254	79.254	0								0	0	0	1.0178	1	32783	32783		0.69038	0	1				35315	298	17424	17501	41199	41199					0.10620271291327299
TVLTRSKR	8	Unmodified	_TVLTRSKR_					0	0	0		nc|ENSG00000165304|Q14680-3|MELK;nc|ENSG00000165304|Q14680-4|MELK;chr9:36589652-36597222|407|15.49|0.38|5.34|+|ENST00000536987|MELK,MELK;nc|ENSG00000165304|Q14680-5|MELK;nc|ENSG00000165304|Q14680-2|MELK;nc|ENSG00000165304|Q14680-8|MELK;nc|ENSG00000165304|Q14680-7|MELK;nc|ENSG00000165304|Q14680-6|MELK;ENSG00000165304|ENST00000298048|MELK	nc|ENSG00000165304|Q14680-3|MELK	nc|ENSG00000165304|Q14680-3|MELK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.3052551150322	2	480.801083	959.587613	2.4865	0.0011955	-1.2638	-0.00060765	1.2227	0.00058786	480.80054811015805	78.785	1.372	79.095	78.674	80.046	0.30933					109	43	5	0	0	0	0.89178	2	32847	32847;32992		0.69038	0	1	268820000			35316	298	17424	17501	41200;41201	41200					0.10620271291327299
TVMGKIFAV	9	Unmodified	_TVMGKIFAV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2781555056572	2	483.278063	964.541574	1.3787	0.00066628	-0.89309	-0.00043161	0.48558	0.00023467	483.2775147637057	50.256	0.23989	52.234	52.07	52.31	1.9772					12	7	2	0	0	0	0.59568	1	21050	21050		16.942	6.1184	1	1092900			35317	3106	17425	17502	41202	41202					0.057884900648673465
TVMGKIFAV	9	Unmodified	_TVMGKIFAV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	483.278063	964.541574	1.4407	0.00069626	-1.1037	-0.00053338	0.33702	0.00016288	483.2777915433818	50.818	0.20903	52.212	52.078	52.287	1.3938	-0.010999	-0.00010192	NaN	16.942	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1668100			35318	3106	17425	17502							0.057884900648673465
TVMLSEAR	8	Unmodified	_TVMLSEAR_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7405883669853	2	453.739302	905.464052	2.4808	0.0011256	-2.5843	-0.0011726	-0.10345	-4.694E-05	453.73913403236384	63.648	0.48545	63.977	63.756	64.241	0.32899					40	15	3	0	0	0	0.8873	1	26704	26704		4.3292	1.7518	1	1882600			35319	2417	17426	17503	41203	41203					0.0075385212867331575
TVMNEGNELI	10	Unmodified	_TVMNEGNELI_					0	0	0			REV__tr|A0A7D7A537|A0A7D7A537_9CLOTChaperoneproteinClpBOS=ClostridiumintestinaleOX=36845GN=clpBPE=3SV=1	REV__tr|A0A7D7A537|A0A7D7A537_9CLOTChaperoneproteinClpBOS=ClostridiumintestinaleOX=36845GN=clpBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2733642458916	2	560.271164	1118.52777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.267	1	60.686	60.186	61.186	1.4196								0	0	0	0.6513	1	24852	24852		13.042	0	1		+		35320	15879	17427	17504	41204	41204					-0.0267483222487499
TVMTIKDQ	8	Unmodified	_TVMTIKDQ_					0	0	0			REV__ENST00000560634.1_1_15:84858634-84860056:+|nuORF	REV__ENST00000560634.1_1_15:84858634-84860056:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	935.4890014529228	1	935.486644	934.479368	2.0941	0.001959	-1.2074	-0.0011295	0.88668	0.00082948	935.4856507801795	46.671	0.23778	48.641	48.503	48.741	1.9703					11	7	2	0	0	0	0.82039	2	19513	19513;19568		19.439	0	1	675350	+		35321	13879	17428	17505	41205;41206	41205					0.00950718925878391
TVNICCSDP	9	Unmodified	_TVNICCSDP_					0	0	0			REV__nc|ENSG00000135404|P08962-3|CD63	REV__nc|ENSG00000135404|P08962-3|CD63	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1993896365166	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.67	1	70.523	70.023	71.023	1.853								0	0	0	0.42693	1	28810	28810		3.9444	1.3669	1		+		35322	9939	17429	17506	41207	41207					-0.09342377256677992
TVNLQSPLK	9	Unmodified	_TVNLQSPLK_					0	0	0		nc|ENSG00000148516|P37275-3|ZEB1;nc|ENSG00000148516|P37275-4|ZEB1;nc|ENSG00000148516|P37275-5|ZEB1;ENST00000488625.6_1_10:31676182-31816189:+|nuORF;nc|ENSG00000148516|P37275|ZEB1;ENSG00000148516|ENST00000424869|ZEB1	nc|ENSG00000148516|P37275-3|ZEB1	nc|ENSG00000148516|P37275-3|ZEB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2960998415947	2	500.295299	998.576045	2.5232	0.0012623	-2.023	-0.0010121	0.50021	0.00025025	500.2946016299621	66.163	0.254	66.487	66.305	66.559	0.32449					11	7	2	0	0	0	0.6486	1	27678	27678		9.3831	0	1	640330			35323	3216	17430	17507	41208	41208					0.07670029477321805
TVNTGELR	8	Unmodified	_TVNTGELR_					0	0	0			REV__ENST00000468071.1_1_2:18736459-18741913:-|nuORF	REV__ENST00000468071.1_1_2:18736459-18741913:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1196472048759	2	445.240524	888.466495	0.4227	0.0001882	-0.72266	-0.00032176	-0.29995	-0.00013355	445.24033711205317	16.791	0.26468	18.093	17.939	18.203	1.3023					19	8	3	0	0	0	2.3239	1	6955	6955		11.64	0	1	2653700	+		35324	11921	17431	17508	41209	41209					0.01780023858009372
TVNWRFLP	8	Unmodified	_TVNWRFLP_					0	0	0		nc|ENSG00000214160|Q92685-2|ALG3;ENSG00000214160|ENST00000397676|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	nc|ENSG00000214160|Q92685-2|ALG3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	516.3154174685478	2	516.784902	1031.55525	2.4369	0.0012593	2.1452	0.0011086	4.582	0.0023679	516.7849005469527	69.436	0.48206	70.801	70.614	71.096	1.3657					26	15	2	0	0	0	2.3239	1	29074	29074		14.582	0	1	3409800			35325	5237	17432	17509	41210	41210					0.040734838883281554
TVPAVMSP	8	Unmodified	_TVPAVMSP_					0	0	0			REV__ENST00000508381.1_1_6:82881144-82882279:-|nuORF	REV__ENST00000508381.1_1_6:82881144-82882279:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	800.6290771365166	1	801.417502	800.410226	1.7363	0.0013915	3.9495	0.0031652	5.6858	0.0045567	801.4212569462876	95.407	0.22007	95.407	95.291	95.511	0					10	7	2	0	0	0	2.3239	1	39911	39911		0.52476	0	1	2774000	+		35326	8500	17433	17510	41211	41211					0.0020367969698327215
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7887451052666	2	484.787444	967.560336	1.1735	0.00056888	1.9409	0.00094094	3.1144	0.0015098	484.78832550988284	26.401	0.358	26.401	26.206	26.564	0					34	11	4	0	0	0	0.88663	1	11041	11041		4.756	0	1	10175000			35327	16387	17434	17511	41212	41212					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7893249392509	2	484.787444	967.560336	1.2071	0.00058519	1.4434	0.00069975	2.6505	0.0012849	484.7880848350897	27.124	0.33647	27.124	26.922	27.259	0					24	10	3	0	0	0	0.88663	1	11307	11307		4.756	0	1	3969700			35328	16387	17434	17511	41213	41213					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7888671755791	2	484.787444	967.560336	1.6616	0.00080551	1.1125	0.00053935	2.7741	0.0013449	484.7878952194563	25.867	0.36483	26.119	25.921	26.285	0.25197					32	11	4	0	0	0	0.88663	1	10818	10818		4.756	0	1	10155000			35329	16387	17434	17511	41214	41214					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	323.5286743044853	3	323.527388	967.560336	0.2481	8.0267E-05	3.3032	0.0010687	3.5513	0.0011489	323.52861015681833	25.867	0.73354	26.119	25.552	26.285	0.25197					59	23	5	0	0	0	0.89008	1	10830	10830		1.6526	0	1	129180000			35330	16387	17434	17511	41215	41215					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7879821658134	2	484.787444	967.560336	1.6969	0.00082264	0.79144	0.00038368	2.4883	0.0012063	484.7876207358244	26.523	0.36181	26.785	26.624	26.986	0.26173					25	11	3	0	0	0	0.88663	2	11061	11061;11106		4.756	0	1	5105300			35331	16387	17434	17511	41216;41217	41216					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7886840701103	2	484.787444	967.560336	1.478	0.0007165	0.80929	0.00039233	2.2873	0.0011088	484.7877921975363	24.654	0.2954	25.895	25.732	26.028	1.241					27	9	4	0	0	0	0.88663	2	10319	10271;10319		4.756	0	1	9010000			35332	16387	17434	17511	41218;41219	41219					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7886535525322	2	484.787444	967.560336	1.4072	0.00068217	1.241	0.00060162	2.6482	0.0012838	484.7880308158669	25.324	0.30462	26.583	26.436	26.741	1.2594					23	9	3	0	0	0	0.89008	2	10579	10579;10627		2.5775	0	1	2304000			35333	16387	17434	17511	41220;41221	41220					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	323.5284606814384	3	323.527388	967.560336	-0.034411	-1.1133E-05	3.4095	0.0011031	3.3751	0.0010919	323.5285377792715	24.268	0.4262	25.953	25.692	26.118	1.6845					51	13	6	0	0	0	0.89008	1	10149	10149		1.6526	0	1	94859000			35334	16387	17434	17511	41222	41222					0.07525787750944346
TVPIRFHV	8	Unmodified	_TVPIRFHV_					0	0	0		tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7890197634697	2	484.787444	967.560336	0.53406	0.00025891	2.1343	0.0010347	2.6684	0.0012936	484.78857639406243	24.965	0.27307	26.649	26.513	26.786	1.6845					17	8	3	0	0	0	0.88663	2	10411	10411;10461		4.756	0	1	2534000			35335	16387	17434	17511	41223;41224	41223					0.07525787750944346
TVPKVLVDL	9	Unmodified	_TVPKVLVDL_					0	0	0		OR4D10|p.I76T|1|0.46|ENSG00000254466|chr11:59477656-59477656|T/C|missense_variant;ENSG00000254466|ENST00000530162|OR4D10	OR4D10|p.I76T|1|0.46|ENSG00000254466|chr11:59477656-59477656|T/C|missense_variant	OR4D10|p.I76T|1|0.46|ENSG00000254466|chr11:59477656-59477656|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.3117858767509	2	492.310418	982.606283	3.8423	0.0018916	0.4205	0.00020702	4.2628	0.0020986	492.31059661249833	81.902	0.3421	83.115	82.975	83.317	1.2125					19	10	2	0	0	0	0.13873	1	34391	34391		39.957	1.8061	1	1557000			35336	5392	17435	17512	41225	41225					0.11428388142508084
TVPMTTVP	8	Unmodified	_TVPMTTVP_					0	0	0		ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	ENSG00000113249|ENST00000523175|HAVCR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	845.1719848513603	1	845.443717	844.43644	3.0677	0.0025936	-1.0594	-0.00089566	2.0083	0.0016979	845.4453573274142	95.209	0.073074	95.611	95.568	95.641	0.40208					4	2	2	0	0	0	2.3239	1	40041	40041		8.5933	0.68312	1	1924800			35337	1812	17436	17513	41226	41226					0.007999488684504286
TVPNQVVVI	9	Unmodified	_TVPNQVVVI_					0	0	0			REV__HS3ST2|p.R205Q|1|0.31|ENSG00000122254|chr16:22915072-22915072|G/A|missense_variant	REV__HS3ST2|p.R205Q|1|0.31|ENSG00000122254|chr16:22915072-22915072|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	485.2474243044853	2	484.792392	967.570232	2.4818	0.0012032	-3.7771	-0.0018311	-1.2953	-0.00062795	484.7893315145986	71.936	0.39688	73.76	73.507	73.904	1.824					16	12	2	0	0	0	0.11716	1	30086	30086		4.3292	0	1	948150	+		35338	14225	17437	17514	41227	41227					0.08514930965668555
TVPPVFVSV	9	Unmodified	_TVPPVFVSV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.7767516970634	2	472.776211	943.537869	2.1891	0.0010349	-0.41768	-0.00019747	1.7714	0.00083747	472.7758552006752	67.931	0.85298	67.931	67.537	68.39	0					47	26	2	0	0	0	0.24063	5	28247	28199;28247;28301;28369;28434		28.487	28.487	1	1083500			35339	3438	17438	17515	41228;41229;41230;41231;41232	41229					0.06384143562661393
TVPPVFVSV	9	Unmodified	_TVPPVFVSV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7769042849541	2	472.776211	943.537869	2.4812	0.001173	-0.26139	-0.00012358	2.2198	0.0010495	472.7759445307515	67.419	0.806	67.741	67.412	68.218	0.32269					48	25	2	0	0	0	0.24063	5	28166	28166;28219;28271;28321;28377		28.487	11.545	1	923690			35340	3438	17438	17515	41233;41234;41235;41236;41237	41233					0.06384143562661393
TVPPVFVSV	9	Unmodified	_TVPPVFVSV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7773620486259	2	472.776211	943.537869	2.1675	0.0010247	-0.012276	-5.8038E-06	2.1552	0.0010189	472.77609070662066	66.134	1.1301	67.523	67.054	68.184	1.3887					81	36	3	0	0	0	0.049839	5	27758	27707;27758;27811;27864;27964		68.081	28.487	1	4527200			35341	3438	17438	17515	41238;41239;41240;41241;41242	41239					0.06384143562661393
TVPPVFVSV	9	Unmodified	_TVPPVFVSV_					0	0	0		KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant;nc|ENSG00000156113|Q12791-5|KCNMA1;nc|ENSG00000156113|Q12791-4|KCNMA1;nc|ENSG00000156113|Q12791-2|KCNMA1;ENSG00000156113|ENST00000286628|KCNMA1;nc|ENSG00000156113|Q12791-7|KCNMA1;nc|ENSG00000156113|Q12791-3|KCNMA1	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	KCNMA1|p.N1094Tfs*8|1|0.39|ENSG00000156113|chr10:76891580-76891586|TCCCTAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7765075564384	2	472.776211	943.537869	2.0546	0.00097135	0.23981	0.00011338	2.2944	0.0010847	472.7759437032919	65.775	1.4219	67.684	66.907	68.329	1.9085					108	45	3	0	0	0	0.045797	4	27574	27522;27574;27626;27735		71.134	13.662	1	5188500			35342	3438	17438	17515	41243;41244;41245;41246	41244					0.06384143562661393
TVPQLEAPPAS	11	Unmodified	_TVPQLEAPPAS_					0	0	0		ENST00000579008.1_1_18:8412788-8413139:+|nuORF	ENST00000579008.1_1_18:8412788-8413139:+|nuORF	ENST00000579008.1_1_18:8412788-8413139:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3001586794853	2	555.295496	1108.57644	2.6877	0.0014925	2.8066	0.0015585	5.4943	0.003051	555.2973310839238	76.128	0.53229	77.895	77.627	78.159	1.7672					44	16	4	0	0	0	0.46674	1	31911	31911		24.991	3.2443	1	2908700			35343	7425	17439	17516	41247	41247					0.026494044064975242
TVQFQLTNI	9	Unmodified	_TVQFQLTNI_					0	0	0			REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2944213747978	2	532.292756	1062.57096	2.9704	0.0015811	-0.87383	-0.00046513	2.0966	0.001116	532.2930146239205	62.515	0.63343	63.928	63.711	64.344	1.4134					73	20	5	0	0	0	0.20671	1	26164	26164		32.305	0	1	17234000	+		35344	11457	17440	17517	41248	41248					0.042177256146942455
TVQFQLTNI	9	Unmodified	_TVQFQLTNI_					0	0	0			REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	REV__ENST00000504117.1_1_5:93752768-93812878:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2939330935478	2	532.292756	1062.57096	3.217	0.0017124	-1.0069	-0.00053599	2.2101	0.0011764	532.2923803261992	61.994	0.60844	63.951	63.719	64.328	1.9571					58	19	5	0	0	0	0.20671	2	26013	25969;26013		32.305	3.0875	1	12249000	+		35345	11457	17440	17517	41249;41250	41250					0.042177256146942455
TVQPKFPPL	9	Unmodified	_TVQPKFPPL_					0	0	0			REV__ENST00000489375.5_1_19:40739781-40741265:-|nuORF	REV__ENST00000489375.5_1_19:40739781-40741265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.8077270388603	2	513.80276	1025.59097	1.4551	0.00074761	4.2075	0.0021618	5.6626	0.0029094	513.8046629957503	80.232	0.41709	81.948	81.663	82.08	1.7167					33	13	3	0	0	0	0.70108	1	33587	33587		7.2892	0	1	5684400	+		35346	9164	17441	17518	41251	41251					0.0791952134532039
TVQRNDYR	8	Unmodified	_TVQRNDYR_					0	0	0			REV__tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	REV__tr|A0A7D6VMB6|A0A7D6VMB6_9CLOTUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelateligaseOS=ClostridiumintestinaleOX=36845GN=murEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.5266296267509	3	351.180828	1050.52066	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.025	1	85.213	84.713	85.713	1.1879								0	0	0	1.0178	1	35260	35260		5.2969	1.7004	1		+		35347	15313	17442	17519	41252	41252					-0.0025838399044459948
TVRFFSFGKDS	11	Unmodified	_TVRFFSFGKDS_					0	0	0		ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8891479372978	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.729	1	29.008	28.508	29.508	1.2789								0	0	0	0.63775	1	11620	11620		0.36667	0.097654	1				35348	4886	17443	17520	41253	41253					0.007201845634881465
TVRKRKKKRRN	11	Unmodified	_TVRKRKKKRRN_					0	0	0		ENST00000461935.1_1_1:70716327-70716369:+|nuORF	ENST00000461935.1_1_1:70716327-70716369:+|nuORF	ENST00000461935.1_1_1:70716327-70716369:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1470.971484363079	1	1469.96116	1468.95388	2.7364	0.0040224	1.2312	0.0018099	3.9676	0.0058323	1469.963040085319	107.88	0.083168	108.04	107.99	108.07	0.15781					11	5	3	0	0	0	1.0405	1	46529	46529		0	0	1	22750000			35349	6677	17444	17521	41254	41254					0.23816192187473462
TVRKTKLMVY	10	Unmodified	_TVRKTKLMVY_					0	0	0			REV__ENST00000495270.1_1_9:130698003-130699012:-|nuORF	REV__ENST00000495270.1_1_9:130698003-130699012:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8688842654228	2	619.868108	1237.72166	1.7706	0.0010975	2.6328	0.001632	4.4034	0.0027295	619.8694401373735	76.768	0.80226	78.535	78.222	79.025	1.7672					38	24	2	0	0	0	0.89803	1	32275	32275		1.6526	0	1	831880	+		35350	10000	17445	17522	41255	41255					0.11231169001871422
TVRLHWCP	8	Unmodified	_TVRLHWCP_					0	0	0		ENST00000559327.1_1_15:65676349-65688574:-|nuORF;nc|ENSG00000103742|Q8TDY8-2|IGDCC4;ENSG00000103742|ENST00000352385|IGDCC4	ENST00000559327.1_1_15:65676349-65688574:-|nuORF	ENST00000559327.1_1_15:65676349-65688574:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	506.7985717654228	2	506.263279	1010.51201	3.1512	0.0015953	-1.3447	-0.00068078	1.8064	0.00091453	506.2631986956674	62.321	0.19179	63.739	63.588	63.779	1.4177					8	5	2	0	0	0	2.3239	1	26141	26141		5.7604	0	1	316570			35351	1441	17446	17523	41256	41256					0.007169708393803376
TVRLVFKI	8	Unmodified	_TVRLVFKI_					0	0	0		ENSG00000165929|ENST00000435962|TC2N	ENSG00000165929|ENST00000435962|TC2N	ENSG00000165929|ENST00000435962|TC2N	MSMS	GG20161007_CRH_Patient100_A02_01	1	488.3225890994072	2	488.32112	974.627687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.068	1	84.068	83.568	84.568	0								0	0	0	1.0178	1	35035	35035		2.8892	0	1				35352	3868	17447	17524	41257	41257					0.13935817961885277
TVRQHFSF	8	Unmodified	_TVRQHFSF_					0	0	0			REV__ENST00000591632.5_1_18:60191431-60230292:+|nuORF	REV__ENST00000591632.5_1_18:60191431-60230292:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2657348513603	2	511.264333	1020.51411	2.6808	0.0013706	-1.5075	-0.00077072	1.1733	0.00059987	511.26349890458596	76.679	0.76981	78.447	78.095	78.865	1.7672					31	23	2	0	0	0	0.87572	1	32142	32142		11.64	0	1	1143400	+		35353	10163	17448	17525	41258	41258					0.004677228488503715
TVRQLERV	8	Unmodified	_TVRQLERV_					0	0	0		nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2;ENSG00000172432|ENST00000307126|GTPBP2;GTPBP2-VEGFA|1|fusion	nc|ENSG00000172432|Q9BX10-2|GTPBP2	nc|ENSG00000172432|Q9BX10-2|GTPBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7998229861259	2	500.79854	999.582528	1.7093	0.00085602	-0.217	-0.00010867	1.4923	0.00074735	500.79797369768573	77.611	0.43394	77.611	77.377	77.811	0					32	13	3	0	0	0	0.89051	1	32253	32253		2.3027	0	1	6020200			35354	4236	17449	17526	41259	41259					0.08271967428697735
TVRQLERV	8	Unmodified	_TVRQLERV_					0	0	0		nc|ENSG00000172432|Q9BX10-2|GTPBP2;nc|ENSG00000172432|Q9BX10-4|GTPBP2;ENSG00000172432|ENST00000307126|GTPBP2;GTPBP2-VEGFA|1|fusion	nc|ENSG00000172432|Q9BX10-2|GTPBP2	nc|ENSG00000172432|Q9BX10-2|GTPBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7987853884697	2	500.79854	999.582528	3.0786	0.0015417	-1.2769	-0.00063948	1.8017	0.00090226	500.79735979043	74.124	0.28459	74.449	74.296	74.581	0.32494					14	8	2	0	0	0	0.89051	1	31025	31025		2.3027	0	1	629780			35355	4236	17449	17526	41260	41260					0.08271967428697735
TVRQVNQL	8	Unmodified	_TVRQVNQL_					0	0	0			REV__ENSG00000166920|ENST00000396650|C15orf48	REV__ENSG00000166920|ENST00000396650|C15orf48	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2774841189384	2	479.277441	956.540328	1.8135	0.00086917	1.1189	0.00053627	2.9324	0.0014054	479.2777912357468	64.952	0.74853	66.86	66.627	67.376	1.9085					32	23	2	0	0	0	0.88055	1	27256	27256		8.5933	1.304	1	617710	+		35356	10847	17450	17527	41261	41261					0.06031992020314192
TVRQVNQL	8	Unmodified	_TVRQVNQL_					0	0	0			REV__ENSG00000166920|ENST00000396650|C15orf48	REV__ENSG00000166920|ENST00000396650|C15orf48	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	479.277441	956.540328	2.7289	0.0013079	-0.3012	-0.00014436	2.4277	0.0011635	479.2771793448279	66.207	1.0426	66.532	66.24	67.282	0.32449	-0.046088	-0.00085521	NaN	8.5933	43	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561300	+		35357	10847	17450	17527							0.06031992020314192
TVRQVNQL	8	Unmodified	_TVRQVNQL_					0	0	0			REV__ENSG00000166920|ENST00000396650|C15orf48	REV__ENSG00000166920|ENST00000396650|C15orf48	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	479.277441	956.540328	3.047	0.0014604	1.3455	0.00064489	4.3926	0.0021053	479.27779107915455	65.227	0.90245	66.626	66.162	67.064	1.3989	0.047958	0.00072329	NaN	8.5933	42	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	689430	+		35358	10847	17450	17527							0.06031992020314192
TVRQVNQL	8	Unmodified	_TVRQVNQL_					0	0	0			REV__ENSG00000166920|ENST00000396650|C15orf48	REV__ENSG00000166920|ENST00000396650|C15orf48	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	479.277441	956.540328	1.8135	0.00086917	1.1189	0.00053627	2.9324	0.0014054	479.2777912357468	64.952	0.74853	66.86	66.627	67.376	1.9085	0.28212	0.00050605	NaN	8.5933	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617710	+		35359	10847	17450	17527							0.06031992020314192
TVRRDPTL	8	Unmodified	_TVRRDPTL_					0	0	0		ENSG00000180104|ENST00000512944|EXOC3	ENSG00000180104|ENST00000512944|EXOC3	ENSG00000180104|ENST00000512944|EXOC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2777282595634	2	479.277441	956.540328	1.9386	0.00092912	1.6044	0.00076897	3.543	0.0016981	479.27748828542326	79.043	0.40237	80.778	80.598	81.001	1.735					27	12	3	0	0	0	0.87276	1	33192	33192		13.508	0	1	4377100			35360	4538	17451	17528	41262	41262					0.06031992020314192
TVRRDPTLL	9	Unmodified	_TVRRDPTLL_					0	0	0		ENSG00000180104|ENST00000512944|EXOC3	ENSG00000180104|ENST00000512944|EXOC3	ENSG00000180104|ENST00000512944|EXOC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8198119997978	2	535.819473	1069.62439	2.8442	0.001524	-1.4251	-0.0007636	1.4191	0.00076038	535.8183563264895	83.005	0.4298	84.215	83.948	84.378	1.2091					38	13	4	0	0	0	0.66839	1	34806	34806		8.5933	0	1	3546500			35361	4538	17452	17529	41263	41263					0.09236523117237994
TVRRGQTI	8	Unmodified	_TVRRGQTI_					0	0	0			REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	REV__nc|ENSG00000059122|Q4VC44-4|FLYWCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7787963747978	2	465.777608	929.540663	3.0145	0.0014041	1.5392	0.00071694	4.5537	0.002121	465.777546587963	76.388	0.47771	78.155	77.909	78.386	1.7672					45	14	4	0	0	0	0.88587	1	32116	32116		5.2307	0	1	6750400	+		35362	8645	17453	17530	41264	41264					0.07307411740191583
TVRRLIIHRLK	11	Unmodified	_TVRRLIIHRLK_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9661743044853	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.189	1	29.189	28.689	29.689	0								0	0	0	0.63775	1	12218	12218		2.9952	0	1				35363	2203	17454	17531	41265	41265					0.23431770695719933
TVRRLIIHRLK	11	Unmodified	_TVRRLIIHRLK_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9712402224541	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.527	1	33.527	33.027	34.027	0								0	0	0	0.63775	1	14048	14048		2.9952	1.6657	1				35364	2203	17454	17531	41266	41266					0.23431770695719933
TVRRLIIHRLK	11	Unmodified	_TVRRLIIHRLK_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9705688357353	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.679	1	33.679	33.179	34.179	0								0	0	0	0.63775	1	14113	14113		2.9952	0	1				35365	2203	17454	17531	41267	41267					0.23431770695719933
TVRRLIIHRLK	11	Unmodified	_TVRRLIIHRLK_					0	0	0		nc|ENSG00000124006|O75147-2|OBSL1;ENST00000465149.1_1_2:220420747-220435459:-|nuORF;nc|ENSG00000124006|O75147-1|OBSL1;nc|ENSG00000124006|O75147-4|OBSL1;ENSG00000124006|ENST00000404537|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	nc|ENSG00000124006|O75147-2|OBSL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9715453982353	2	702.967337	1403.92012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.114	1	34.114	33.614	34.614	0								0	0	0	0.63775	1	14296	14296		2.9952	1.6657	1				35366	2203	17454	17531	41268	41268					0.23431770695719933
TVRRQIVV	8	Unmodified	_TVRRQIVV_					0	0	0		sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2;sp|F5HFH0|US15_HCMVMMembraneproteinUS15OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US15PE=3SV=1	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	sp|P09718|US15_HCMVAUncharacterizedproteinHVLF3OS=Humancytomegalovirus(strainAD169)OX=10360GN=US15PE=3SV=2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	485.2596313357353	2	485.811451	969.608348	2.7651	0.0013433	2.8404	0.0013799	5.6055	0.0027232	485.81309887614145	79.727	0.74454	80.978	80.8	81.544	1.2512					30	23	2	0	0	0	2.3239	1	33508	33508		9.3474	0	1	373840			35367	15982	17455	17532	41269	41269					0.12232861670997863
TVRSRWFL	8	Unmodified	_TVRSRWFL_					0	0	0			REV__ENST00000592915.1_1_17:42084599-42085966:+|nuORF	REV__ENST00000592915.1_1_17:42084599-42085966:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1933471560478	2	532.803626	1063.5927	1.5048	0.00080174	-1.5812	-0.00084248	-0.076456	-4.0736E-05	532.8032639963774	96.975	0.15666	96.975	96.862	97.019	0					8	4	3	0	0	0	2.3239	1	40532	40532		0.69038	0.69038	1	556360	+		35368	10623	17456	17533	41270	41270					0.06344575153934784
TVRSVRPN	8	Unmodified	_TVRSVRPN_					0	0	0			REV__ENSG00000167800|ENST00000335385|TBX10	REV__ENSG00000167800|ENST00000335385|TBX10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.7709228396416	2	464.769783	927.525013	2.0115	0.0009349	1.0389	0.00048285	3.0504	0.0014177	464.77005633835313	66.888	0.2224	66.888	66.735	66.957	0					9	6	2	0	0	0	0.88587	1	27852	27852		5.2307	0	1	410780	+		35369	10881	17457	17534	41271	41271					0.05835125223131854
TVRVPLRLRLL	11	Unmodified	_TVRVPLRLRLL_					0	0	0			REV__ENSG00000186474|ENST00000684732|KLK12	REV__ENSG00000186474|ENST00000684732|KLK12	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	667.9506103396416	2	668.450988	1334.88742	0.27257	0.0001822	1.973	0.0013189	2.2456	0.0015011	668.4523206104691	22.565	0.20551	24.217	24.169	24.375	1.6511					10	6	2	0	0	0	0.14606	1	9438	9438		0.30703	0	1	3519100	+		35370	11502	17458	17535	41272	41272					0.2333756357288621
TVSFHATAL	9	Unmodified	_TVSFHATAL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.7541686892509	2	473.753267	945.491981	2.4326	0.0011525	-0.070845	-3.3563E-05	2.3618	0.0011189	473.75298461384733	55.497	0.24137	55.497	55.362	55.603	0					14	8	2	0	0	0	0.20671	1	23113	23113		32.305	0	1	2172800			35371	6418	17459	17536	41273	41273					0.017054983804086987
TVSFHATAL	9	Unmodified	_TVSFHATAL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.7548400759697	2	473.753267	945.491981	2.7605	0.0013078	-1.6642	-0.00078842	1.0963	0.00051939	473.7521317233043	54.875	0.2835	55.196	55.036	55.32	0.32088					15	9	2	0	0	0	0.13873	1	22996	22996		39.957	0	1	1804900			35372	6418	17459	17536	41274	41274					0.017054983804086987
TVSFHATAL	9	Unmodified	_TVSFHATAL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.7535583376884	2	473.753267	945.491981	1.1661	0.00055246	-1.1861	-0.00056193	-0.019976	-9.4639E-06	473.7527090412162	53.509	0.27964	54.909	54.778	55.058	1.4005					20	12	2	0	0	0	0.13873	1	22435	22435		39.957	0	1	6288300			35373	6418	17459	17536	41275	41275					0.017054983804086987
TVSFHATAL	9	Unmodified	_TVSFHATAL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	473.7524291872978	2	473.753267	945.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.908	1	54.877	54.377	55.377	1.9697								0	0	0	0.049614	1	22164	22164		57.471	0	1				35374	6418	17459	17536	41276	41276					0.017054983804086987
TVSFHATAL	9	Unmodified	_TVSFHATAL_					0	0	0		ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	ENST00000417796.1_1_9:84702837-84703236:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	473.7540161013603	2	473.753267	945.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.005	1	54.975	54.475	55.475	1.9697								0	0	0	0.072365	1	22205	22205		39.957	0	1				35375	6418	17459	17536	41277	41277					0.017054983804086987
TVSIPHLRL	9	Unmodified	_TVSIPHLRL_					0	0	0			REV__nc|ENSG00000140459|P05108-2|CYP11A1	REV__nc|ENSG00000140459|P05108-2|CYP11A1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6276122927666	2	518.319109	1034.62366	2.1843	0.0011321	-0.5904	-0.00030602	1.5939	0.00082612	518.3194214454655	81.219	0.15583	81.509	81.369	81.525	0.29056					7	4	2	0	0	0	0.11684	1	33925	33925		4.3292	0	1	495510	+		35376	10125	17460	17537	41278	41278					0.10773728468188892
TVSIPHLRL	9	Unmodified	_TVSIPHLRL_					0	0	0			REV__nc|ENSG00000140459|P05108-2|CYP11A1	REV__nc|ENSG00000140459|P05108-2|CYP11A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	518.319109	1034.62366	2.2392	0.0011606	-2.1336	-0.0011059	0.10564	5.4755E-05	518.3184782967406	81.395	0.17966	81.395	81.319	81.498	0	-0.056991	-0.00086069	NaN	4.3292	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	871540	+		35377	10125	17460	17537							0.10773728468188892
TVSIQVKNPQL	11	Unmodified	_TVSIQVKNPQL_					0	0	0		nc|ENSG00000290942|Q86YQ2|BPIFA4P	nc|ENSG00000290942|Q86YQ2|BPIFA4P	nc|ENSG00000290942|Q86YQ2|BPIFA4P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	613.8596069216728	2	613.858795	1225.70304	1.1546	0.00070879	0.90587	0.00055608	2.0605	0.0012649	613.8594143106982	70.009	0.3425	70.331	70.16	70.503	0.32224					26	10	3	0	0	0	0.24501	1	29283	29283		36.506	5.8028	1	2207200			35378	8021	17461	17538	41279	41279					0.09921330631664205
TVSLGAGAK	9	Unmodified	_TVSLGAGAK_					0	0	0		nc|ENSG00000181163|P06748-3|NPM1;nc|ENSG00000181163|P06748-2|NPM1;ENSG00000181163|ENST00000296930|NPM1;ENST00000518587.1_1_5:170814889-170819841:+|nuORF	nc|ENSG00000181163|P06748-3|NPM1	nc|ENSG00000181163|P06748-3|NPM1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1799804568291	2	402.23471	802.454868	0.0015166	6.1002E-07	-1.9985	-0.00080386	-1.997	-0.00080325	402.233854549306	12.985	0.13734	13.813	13.742	13.879	0.82789					7	4	2	0	0	0	0.11518	1	5375	5375		3.9444	0	1	360670			35379	4570	17462	17539	41280	41280					0.04573826834655392
TVSLSVIIT	9	Unmodified	_TVSLSVIIT_					0	0	0			REV__tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	REV__tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	932.5687744021416	1	932.566275	931.558998	2.8587	0.0026659	-1.5778	-0.0014714	1.2809	0.0011945	932.565940000433	76.984	0.22261	78.265	78.155	78.378	1.2809					9	6	2	0	0	0	0.10294	1	32325	32325		48.346	0	1	1020500	+		35380	14689	17463	17540	41281	41281					0.09048108871525073
TVSLSVIIT	9	Unmodified	_TVSLSVIIT_					0	0	0			REV__tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	REV__tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	932.566275	931.558998	2.8587	0.0026659	-1.5778	-0.0014714	1.2809	0.0011945	932.565940000433	76.984	0.22261	78.265	78.155	78.378	1.2809	-0.12191	-0.00053491	NaN	48.346	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1020500	+		35381	14689	17463	17540							0.09048108871525073
TVSLYLKAN	9	Unmodified	_TVSLYLKAN_					0	0	0		nc|ENSG00000010539|P98182-3|ZNF200;nc|ENSG00000010539|P98182-2|ZNF200;ENSG00000010539|ENST00000414144|ZNF200	nc|ENSG00000010539|P98182-3|ZNF200	nc|ENSG00000010539|P98182-3|ZNF200	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.2893859744072	2	504.78985	1007.56515	2.2551	0.0011383	-0.28371	-0.00014321	1.9714	0.00099513	504.78993137648877	62.914	1.0033	64.859	64.564	65.567	1.9444					74	31	4	0	0	0	0.49082	1	26513	26513		15.847	0	1	11352000			35382	555	17464	17541	41282	41282					0.06166627103027622
TVSPGPRR	8	Unmodified	_TVSPGPRR_					0	0	0			REV__chr1:155055852-155056125|114|28.97|0.05|9.07|+|1|ADAM15,None|2	REV__chr1:155055852-155056125|114|28.97|0.05|9.07|+|1|ADAM15,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2528869509697	2	435.251226	868.487899	3.031	0.0013192	-0.1037	-4.5136E-05	2.9273	0.0012741	435.251240006099	74.68	1.0354	75.005	74.646	75.681	0.32464					59	32	3	0	0	0	0.8909	1	31206	31206		2.0598	0	1	11212000	+		35383	8208	17465	17542	41283	41283					0.048394536773685104
TVSPLLQP	8	Unmodified	_TVSPLLQP_					0	0	0			REV__ENST00000564124.5_1_16:48580029-48653834:-|nuORF	REV__ENST00000564124.5_1_16:48580029-48653834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.7552673220634	2	427.752736	853.490919	1.0287	0.00044002	3.6107	0.0015445	4.6394	0.0019845	427.7542802933195	78.427	0.44073	78.427	78.189	78.629	0					33	13	4	0	0	0	0.8909	1	32603	32603		2.0598	0	1	3173200	+		35384	9089	17466	17543	41284	41284					0.0583128401152635
TVSPRGPR	8	Unmodified	_TVSPRGPR_					0	0	0		ENSG00000136383|ENST00000258888|ALPK3	ENSG00000136383|ENST00000258888|ALPK3	ENSG00000136383|ENST00000258888|ALPK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2528869509697	2	435.251226	868.487899	3.6811	0.0016022	0.035646	1.5515E-05	3.7168	0.0016177	435.2512494731229	73.865	0.84669	75.183	74.623	75.469	1.318					50	26	3	0	0	0	0.8909	1	31026	31026		2.0598	0	1	3735500			35385	2723	17467	17544	41285	41285					0.04839453677379879
TVSRWQWRRRR	11	Unmodified	_TVSRWQWRRRR_					0	0	0			REV__ENST00000487093.5_1_3:51575631-51661706:+|nuORF	REV__ENST00000487093.5_1_3:51575631-51661706:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	793.9460327029228	2	793.947998	1585.88144	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.102	1	98.33	97.83	98.83	0.22776								0	0	0	0.63775	1	41287	41287		1.3295	1.0225	1		+		35386	13396	17468	17545	41286	41286					0.1119385811389293
TVSTVGISII	10	Unmodified	_TVSTVGISII_					0	0	0		nc|ENSG00000145041|Q9Y4B6-2|DCAF1;ENSG00000145041|ENST00000684031|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	nc|ENSG00000145041|Q9Y4B6-2|DCAF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.2982055544853	2	495.297507	988.580462	1.2982	0.000643	0.66712	0.00033042	1.9653	0.00097342	495.2977577244195	39.11	0.37548	39.11	38.921	39.297	0					28	11	3	0	0	0	0.17319	1	16340	16340		52.268	0	1	6959300			35387	3101	17469	17546	41287	41287					0.08571493900251426
TVTDVDIVF	9	Unmodified	_TVTDVDIVF_					0	0	0		ENSG00000171368|ENST00000360578|TPPP	ENSG00000171368|ENST00000360578|TPPP	ENSG00000171368|ENST00000360578|TPPP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1008.527209460735	1	1008.5248	1007.51753	1.8218	0.0018373	-0.70464	-0.00071064	1.1171	0.0011267	1008.5240393861491	67.271	0.48943	68.66	68.467	68.957	1.3888					23	15	2	0	0	0	0.059546	2	28221	28221;28273		64.236	14.243	1	1269700			35388	4185	17470	17547	41288;41289	41288					0.014069281122033317
TVTDVDIVF	9	Unmodified	_TVTDVDIVF_					0	0	0		ENSG00000171368|ENST00000360578|TPPP	ENSG00000171368|ENST00000360578|TPPP	ENSG00000171368|ENST00000360578|TPPP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1008.5248	1007.51753	1.5095	0.0015223	-0.11782	-0.00011882	1.3916	0.0014035	1008.5253651470266	66.838	0.30289	68.727	68.557	68.86	1.8889	0.033719	0.00030975	NaN	64.236	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	858770			35389	4185	17470	17547							0.014069281122033317
TVTFYQRTL	9	Unmodified	_TVTFYQRTL_					0	0	0			REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8068115115166	2	564.806031	1127.59751	1.8443	0.0010417	0.35122	0.00019837	2.1955	0.00124	564.8065035527403	66.994	0.40166	68.383	68.184	68.586	1.3887					18	12	2	0	0	0	0.5697	1	28126	28126		12.532	1.7076	1	1889900	+		35390	9296	17471	17548	41290	41290					0.038814145060541705
TVTFYQRTL	9	Unmodified	_TVTFYQRTL_					0	0	0			REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	REV__ENST00000530761.5_1_11:117857521-117870353:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	564.806031	1127.59751	1.5713	0.00088748	1.1181	0.00063153	2.6894	0.001519	564.8072315064577	66.538	0.34135	68.427	68.245	68.587	1.8889	0.02223	0.00062217	NaN	12.532	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2005600	+		35391	9296	17471	17548							0.038814145060541705
TVTINTLGV	9	Unmodified	_TVTINTLGV_					0	0	0			REV__ENSG00000141956|ENST00000398548|PRDM15	REV__ENSG00000141956|ENST00000398548|PRDM15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	459.2702514529228	2	459.26875	916.522947	2.8463	0.0013072	-0.19195	-8.8158E-05	2.6544	0.0012191	459.2686343388159	60.133	0.57272	61.553	61.298	61.871	1.4196					53	18	4	0	0	0	0.09539	1	25233	25233		50.855	0.92203	1	42802000	+		35392	10168	17472	17549	41291	41291					0.06134651694674176
TVTKVTKTV	9	Unmodified	_TVTKVTKTV_					0	0	0			REV__ENST00000487793.5_1_22:19968732-19974706:-|nuORF	REV__ENST00000487793.5_1_22:19968732-19974706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	488.8082458376884	2	488.8055	975.596446	2.6811	0.0013105	0.39891	0.00019499	3.08	0.0015055	488.805999397067	77.534	0.2495	77.85	77.701	77.95	0.31653					10	7	2	0	0	0	0.76456	1	32443	32443		4.756	0	1	528240	+		35393	8957	17473	17550	41292	41292					0.10767200137149757
TVTPTLVQGQ	10	Unmodified	_TVTPTLVQGQ_					0	0	0		ENST00000579009.1_1_17:16842863-16843217:-|nuORF	ENST00000579009.1_1_17:16842863-16843217:-|nuORF	ENST00000579009.1_1_17:16842863-16843217:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7922241091728	2	522.290214	1042.56587	4.6324	0.0024195	3.2616	0.0017035	7.894	0.004123	522.7924319165911	88.23	0.83099	89.677	89.348	90.179	1.4467					81	25	5	0	0	0	0.35292	1	37166	37166		36.127	3.8215	1	9786300			35394	7426	17474	17551	41293	41293					0.046294217521108294
TVTQRLLLLP	10	Unmodified	_TVTQRLLLLP_					0	0	0		ENST00000370223.7_2_10:102767131-102767407:+|nuORF	ENST00000370223.7_2_10:102767131-102767407:+|nuORF	ENST00000370223.7_2_10:102767131-102767407:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	385.1543762087822	3	385.248291	1152.72304	2.5637	0.00098765	-2.5781	-0.00099323	-0.014476	-5.5767E-06	385.2471903461408	88.289	0.4955	88.523	88.228	88.723	0.23471					52	15	4	0	0	0	0.12559	1	36942	36942		0.77653	0.50751	1	16854000			35395	6109	17475	17552	41294	41294					0.15279126362293027
TVTSVLTSV	9	Unmodified	_TVTSVLTSV_					0	0	0		ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	906.5148803591728	1	906.514239	905.506963	1.538	0.0013943	-0.90002	-0.00081588	0.63802	0.00057837	906.5143991934772	71.177	0.25414	71.177	71.067	71.321	0					12	7	2	0	0	0	0.12174	1	29679	29679		42.095	0	1	701430			35396	1582	17476	17553	41295	41295					0.0504294545777384
TVTSVLTSV	9	Unmodified	_TVTSVLTSV_					0	0	0		ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	906.5185424685478	1	906.514239	905.506963	1.4514	0.0013157	-0.74014	-0.00067095	0.71129	0.0006448	906.5137004803038	70.66	0.2499	70.984	70.862	71.112	0.32359					12	7	2	0	0	0	0.059546	1	29612	29612		64.236	0	1	654200			35397	1582	17476	17553	41296	41296					0.0504294545777384
TVTSVLTSV	9	Unmodified	_TVTSVLTSV_					0	0	0		ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	906.5165893435478	1	906.514239	905.506963	1.9711	0.0017868	-0.6206	-0.00056259	1.3505	0.0012242	906.5135967977487	69.526	0.30914	70.892	70.787	71.096	1.3657					16	9	2	0	0	0	0.029093	1	29181	29181		88.904	0	1	2886300			35398	1582	17476	17553	41297	41297					0.0504294545777384
TVTSVLTSV	9	Unmodified	_TVTSVLTSV_					0	0	0		ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	ENSG00000106689|ENST00000373615|LHX2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	906.514239	905.506963	1.0209	0.00092542	-0.20474	-0.0001856	0.81612	0.00073982	906.5140984504632	68.962	0.21082	70.815	70.766	70.977	1.853	-0.15201	0.00040386	NaN	88.904	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2098300			35399	1582	17476	17553							0.0504294545777384
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7930175662041	2	487.792058	973.569563	1.6562	0.00080788	-0.82959	-0.00040467	0.82659	0.00040321	487.7914676754391	66.751	1.2161	66.751	65.929	67.146	0					68	37	2	0	0	0	0.03795	2	27839	27787;27839		77.984	27.129	1	4742600			35400	2060	17477	17554	41298;41299	41299					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5793945193291	1	974.576839	973.569563	1.6728	0.0016303	0.29649	0.00028895	1.9693	0.0019192	974.5772229813879	66.816	0.50768	66.816	66.608	67.116	0					34	15	3	0	0	0	0.013238	2	27843	27797;27843		104.8	19.442	1	3509700			35401	2060	17477	17554	41300;41301	41301					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7924377322197	2	487.792058	973.569563	2.0615	0.0010056	-0.66912	-0.00032639	1.3924	0.00067919	487.7920407578892	91.583	0.25557	91.583	91.469	91.725	0					18	7	3	0	0	0	0.051699	1	38268	38268		67.344	0	1	1353400			35402	2060	17477	17554	41302	41302					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7928954958916	2	487.792058	973.569563	2.6554	0.0012953	-1.4758	-0.0007199	1.1795	0.00057537	487.7912227687631	66.344	1.0126	66.669	66.083	67.096	0.32449					68	31	3	0	0	0	0.051699	3	27845	27755;27802;27845		67.344	9.5345	1	3131100			35403	2060	17477	17554	41303;41304;41305	41305					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7938415408134	2	487.792058	973.569563	3.0861	0.0015054	0.018585	9.0656E-06	3.1046	0.0015144	487.79208248034735	65.209	0.80963	66.608	66.255	67.064	1.3989					54	25	3	0	0	0	0.006164	2	27331	27283;27331		117.6	20.524	1	8079200			35404	2060	17477	17554	41306;41307	41307					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5832397341728	1	974.576839	973.569563	2.9682	0.0028928	1.3795	0.0013445	4.3477	0.0042372	974.5782196180238	65.157	0.47177	66.556	66.316	66.788	1.3989					39	14	3	0	0	0	0.042029	1	27412	27412		74.423	16.951	1	8905900			35405	2060	17477	17554	41308	41308					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7939941287041	2	487.792058	973.569563	4.5165	0.0022031	-0.56934	-0.00027772	3.9472	0.0019254	487.79176061156966	90.331	0.38579	91.312	91.076	91.462	0.98156					26	11	3	0	0	0	0.076627	1	38042	38042		57.471	0	1	2045800			35406	2060	17477	17554	41309	41309					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7929565310478	2	487.792058	973.569563	1.9299	0.00094137	-0.66908	-0.00032637	1.2608	0.000615	487.79184238276537	64.734	0.63179	66.662	66.325	66.957	1.928					52	19	4	0	0	0	0.006164	2	27143	27098;27143		117.6	19.442	1	10822000			35407	2060	17477	17554	41310;41311	41311					0.08172091525955238
TVTTVILEV	9	Unmodified	_TVTTVILEV_					0	0	0		ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	ENSG00000119203|ENST00000238112|CPSF3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	974.576839	973.569563	1.7353	0.0016912	1.3455	0.0013113	3.0808	0.0030025	974.5782424167406	64.765	0.81795	66.693	66.389	67.207	1.928	-0.0062697	0.00056906	NaN	104.8	54	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6305100			35408	2060	17477	17554							0.08172091525955238
TVVGICCVY	9	Unmodified	_TVVGICCVY_					0	0	0		ENSG00000139324|ENST00000266712|TMTC3;nc|ENSG00000139324|Q6ZXV5|TMTC3	ENSG00000139324|ENST00000266712|TMTC3	ENSG00000139324|ENST00000266712|TMTC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	479.3090698122978	2	478.732632	955.45071	2.0737	0.00099275	-3.6729	-0.0017583	-1.5992	-0.00076558	478.73071350655766	49.42	0.58849	50.811	50.453	51.042	1.3911					23	18	2	0	0	0	0.10844	1	20639	20639		11.64	2.2929	1	411950			35409	2873	17478	17555	41312	41312					-0.028797219749208125
TVVKFWLI	8	Unmodified	_TVVKFWLI_					0	0	0			REV__ENST00000409714.7_1_2:170460711-170470975:+|nuORF	REV__ENST00000409714.7_1_2:170460711-170470975:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.3161498904228	2	503.310221	1004.60589	4.4761	0.0022529	2.6761	0.0013469	7.1523	0.0035998	503.31167481057537	88.268	0.38068	89.715	89.572	89.953	1.4467					26	11	3	0	0	0	0.87803	2	37200	37200;37248		10.183	0	1	1946200	+		35410	12917	17479	17556	41313;41314	41313					0.10377013213314967
TVVLPDYLK	9	Unmodified	_TVVLPDYLK_					0	0	0		ENST00000445289.6_1_17:18067119-18075721:+|nuORF	ENST00000445289.6_1_17:18067119-18075721:+|nuORF	ENST00000445289.6_1_17:18067119-18075721:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	524.2711669802666	2	524.307875	1046.6012	2.7496	0.0014416	-0.68966	-0.00036159	2.0599	0.00108	524.3075104766575	63.608	0.40491	65.553	65.345	65.75	1.9444					35	12	4	0	0	0	0.098208	1	26758	26758		24.021	0	1	9119100			35411	6579	17480	17557	41315	41315					0.07976084279857787
TVVLPKEV	8	Unmodified	_TVVLPKEV_					0	0	0			REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.7781249880791	2	442.776211	883.537869	1.594	0.00070576	1.9308	0.0008549	3.5247	0.0015607	442.77782377606366	54.457	0.41039	54.457	54.249	54.659	0					21	13	2	0	0	0	0.88163	1	22668	22668		7.9102	0	1	1578500	+		35412	12495	17481	17558	41316	41316					0.09144143562650697
TVVLPKEV	8	Unmodified	_TVVLPKEV_					0	0	0			REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	442.776211	883.537869	1.594	0.00070576	1.9308	0.0008549	3.5247	0.0015607	442.77782377606366	54.457	0.41039	54.457	54.249	54.659	0	0.18671	-0.00045057	NaN	7.9102	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1578500	+		35413	12495	17481	17558							0.09144143562650697
TVVLPKEV	8	Unmodified	_TVVLPKEV_					0	0	0			REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	REV__ENST00000341164.8_1_19:58489676-58489772:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	442.776211	883.537869	2.3411	0.0010366	6.1474	0.0027219	8.4885	0.0037585	442.78043008985446	53.763	0.28011	54.083	53.912	54.192	0.32088	-0.18671	0.0032834	NaN	7.9102	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2053100	+		35414	12495	17481	17558							0.09144143562650697
TVVLQSGPFFP	11	Unmodified	_TVVLQSGPFFP_					0	0	0			REV__ENSG00000222046|ENST00000409358|DCDC2B	REV__ENSG00000222046|ENST00000409358|DCDC2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	596.3232299685478	2	596.324057	1190.63356	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.156	1	41.467	40.967	41.967	1.3102								0	0	0	0.63772	1	16843	16843		9.3831	0.63772	1		+		35415	11884	17482	17559	41317	41317					0.0458687168288634
TVVTARPVL	9	Unmodified	_TVVTARPVL_					0	0	0			REV__tr|A0A553SI36|A0A553SI36_NIACIpyridoxalkinaseOS=NialliacirculansOX=1397GN=pdxKPE=3SV=1	REV__tr|A0A553SI36|A0A553SI36_NIACIpyridoxalkinaseOS=NialliacirculansOX=1397GN=pdxKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3012878298759	2	478.300384	954.586216	1.106	0.00052898	-0.13373	-6.3964E-05	0.97222	0.00046501	478.30029915944743	52.619	0.22588	54.591	54.48	54.705	1.9722					13	6	3	0	0	0	0.30098	1	22080	22080		25.399	1.3787	1	1470200	+		35416	14834	17483	17560	41318	41318					0.10710637202555517
TVWKPRPV	8	Unmodified	_TVWKPRPV_					0	0	0		ENST00000552109.5_1_12:42554393-42631425:-|nuORF	ENST00000552109.5_1_12:42554393-42631425:-|nuORF	ENST00000552109.5_1_12:42554393-42631425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7958862185478	2	491.795269	981.575986	0.69724	0.0003429	1.6946	0.00083339	2.3918	0.0011763	491.79581611987294	31.639	0.36716	32.92	32.743	33.11	1.2813					18	11	2	0	0	0	0.88055	1	13275	13275		8.5933	3.3626	1	2235000			35417	7273	17484	17561	41319	41319					0.08446074267988024
TVWPRWERWRW	11	Unmodified	_TVWPRWERWRW_					0	0	0			REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	REV__ENST00000589087.5_1_19:2806818-2807876:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	829.5991699099541	2	829.428576	1656.8426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.099	1	99.297	98.797	99.797	0.19767								0	0	0	0.63775	1	41719	41719		1.3295	0.25807	1		+		35418	14049	17485	17562	41320	41320					0.04045132759506487
TVYFIKPVV	9	Unmodified	_TVYFIKPVV_					0	0	0			REV__SLC39A11-PITPNC1|1|fusion	REV__SLC39A11-PITPNC1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1912719607353	2	533.320786	1064.62702	1.7913	0.00095533	-0.37958	-0.00020244	1.4117	0.00075289	533.3203404880591	54.501	0.16025	55.906	55.771	55.931	1.4048					6	4	2	0	0	0	0.11645	1	22807	22807		2.0598	1.4583	1	377670	+		35419	14626	17486	17563	41321	41321					0.09728978522161924
TVYGGLMYI	9	Unmodified	_TVYGGLMYI_					0	0	0		ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1016.513598620892	1	1016.51213	1015.50485	2.3272	0.0023657	-0.77986	-0.00079274	1.5474	0.0015729	1016.5116929753038	70.885	0.31207	72.238	72.033	72.345	1.3536					15	9	2	0	0	0	0.11478	2	29764	29715;29764		44.407	15.92	1	2802900			35420	5064	17487	17564	41322;41323	41323					-0.0022780655169754027
TVYGGLMYI	9	Unmodified	_TVYGGLMYI_					0	0	0		ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1016.51182860136	1	1016.51213	1015.50485	1.7354	0.001764	-0.57327	-0.00058273	1.1621	0.0011813	1016.5117241706412	70.345	0.30911	72.183	72.01	72.319	1.8378					14	9	2	0	0	0	0.10722	1	29505	29505		46.921	8.7697	1	2027200			35421	5064	17487	17564	41324	41324					-0.0022780655169754027
TVYGGLMYI	9	Unmodified	_TVYGGLMYI_					0	0	0		ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	ENSG00000198642|ENST00000359039|KLHL9	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1016.51213	1015.50485	2.1413	0.0021767	-2.6222	-0.0026655	-0.48088	-0.00048882	1016.5106897053294	72.079	0.19187	72.404	72.228	72.42	0.32494	0.12934	-0.0017378	NaN	46.921	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	328750			35422	5064	17487	17564							-0.0022780655169754027
TVYITRKLP	9	Unmodified	_TVYITRKLP_					0	0	0		tr|A0A553ST18|A0A553ST18_NIACID-glyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_04040PE=3SV=1	tr|A0A553ST18|A0A553ST18_NIACID-glyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_04040PE=3SV=1	tr|A0A553ST18|A0A553ST18_NIACID-glyceratedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_04040PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8343383669853	2	545.834591	1089.65463	1.9974	0.0010903	-2.5612	-0.001398	-0.56377	-0.00030772	545.8330286702136	83.397	0.83265	83.397	82.984	83.816	0					44	26	2	0	0	0	0.82604	1	34722	34722		2.3027	0	1	1545300			35423	16633	17488	17565	41325	41325					0.11338881782421595
TVYKVLVSV	9	Unmodified	_TVYKVLVSV_					0	0	0		nc|ENSG00000288602|Q96BR1-2|SGK3;ENSG00000104205|ENST00000521198|SGK3	nc|ENSG00000288602|Q96BR1-2|SGK3	nc|ENSG00000288602|Q96BR1-2|SGK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3193542361259	2	504.310418	1006.60628	3.3279	0.0016783	4.3381	0.0021878	7.6661	0.0038661	504.3129000783489	64.656	0.46063	66.063	65.833	66.293	1.4071					32	14	3	0	0	0	0.76456	1	27192	27192		4.756	0	1	4555200			35424	1451	17489	17566	41326	41326					0.10324388142532825
TVYLRTLPMK	10	Unmodified	_TVYLRTLPMK_					0	0	0			REV__ENSG00000179826|ENST00000621697|MRGPRX3	REV__ENSG00000179826|ENST00000621697|MRGPRX3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3567993044853	2	611.354834	1220.69511	2.1731	0.0013285	0.84117	0.00051425	3.0142	0.0018428	611.3554599567536	75.868	0.59371	75.868	75.66	76.254	0					34	18	2	0	0	0	0.89803	1	31603	31603		1.4819	0.15237	1	930680	+		35425	11284	17490	17567	41327	41327					0.09359480110515506
TVYMWDYGYK	10	Unmodified	_TVYMWDYGYK_					0	0	0			REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.5334960818291	3	442.53388	1324.57981	0.77856	0.00034454	-2.7167	-0.0012022	-1.9381	-0.00085768	442.5328394524847	26.104	0.33287	26.104	25.964	26.297	0					32	10	4	0	0	0	0.85124	1	10904	10904		3.5871	1.1523	1	2346700	+		35426	12601	17491	17568	41328	41328					-0.06949668811125775
TVYMWDYGYK	10	Unmodified	_TVYMWDYGYK_					0	0	0			REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	442.53388	1324.57981	1.3691	0.00060588	-3.5443	-0.0015685	-2.1752	-0.00096258	442.532544263757	25.736	0.33763	25.988	25.827	26.165	0.25197	0.011401	-0.00019164	NaN	3.5871	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	603340	+		35427	12601	17491	17568							-0.06949668811125775
TVYMWDYGYK	10	Unmodified	_TVYMWDYGYK_					0	0	0			REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	REV__ENST00000361236.7_2_11:102267852-102267975:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	442.53388	1324.57981	1.6298	0.00072126	-3.9701	-0.0017569	-2.3403	-0.0010357	442.5321398578046	24.597	0.18126	25.838	25.701	25.882	1.241	-0.13868	-0.00075703	NaN	3.5871	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	434370	+		35428	12601	17491	17568							-0.06949668811125775
TWFPKTPMLF	10	Unmodified	_TWFPKTPMLF_					0	0	0		ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3311035037041	2	634.330827	1266.6471	2.1385	0.0013565	0.25937	0.00016453	2.3979	0.001521	634.3296638079595	77.622	0.37724	78.903	78.76	79.137	1.2809					21	11	3	0	0	0	0.13797	1	32570	32570		57.249	25.212	1	2060300			35429	4164	17492	17569	41329	41329					0.024444061904659975
TWFPKTPMLF	10	Unmodified	_TWFPKTPMLF_					0	0	0		ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	ENSG00000170852|ENST00000304056|KBTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3325073122978	2	634.330827	1266.6471	1.122	0.0007117	-0.1279	-8.1128E-05	0.99407	0.00063057	634.330562789858	77.121	0.44909	78.872	78.592	79.041	1.7514					25	13	3	0	0	0	0.051944	2	32335	32300;32335		78.06	51.792	1	1620100			35430	4164	17492	17569	41330;41331	41331					0.024444061904659975
TWFTAGAKLLF	11	Unmodified	_TWFTAGAKLLF_					0	0	0		ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2;STAT2|p.V424Dfs*116|1|0.05|ENSG00000170581|chr12:56349496-56349497|-/GAGTGGGATCTATGGATGTCTGGTAGAT|frameshift_variant	ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.8491699099541	2	627.847699	1253.68084	2.5276	0.001587	-0.71931	-0.00045162	1.8083	0.0011353	627.8475364574888	80.765	0.63646	81.998	81.742	82.378	1.2332					56	20	4	0	0	0	0.0015433	3	33908	33858;33908;33967		159.1	111.51	1	14004000			35431	4152	17493	17570	41332;41333;41334	41333					0.06415150953898774
TWFTAGAKLLF	11	Unmodified	_TWFTAGAKLLF_					0	0	0		ENSG00000170581|ENST00000314128|STAT2;nc|ENSG00000170581|P52630-4|STAT2;STAT2|p.V424Dfs*116|1|0.05|ENSG00000170581|chr12:56349496-56349497|-/GAGTGGGATCTATGGATGTCTGGTAGAT|frameshift_variant	ENSG00000170581|ENST00000314128|STAT2	ENSG00000170581|ENST00000314128|STAT2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.8461791872978	2	627.847699	1253.68084	0.70032	0.00043969	-0.48629	-0.00030532	0.21403	0.00013438	627.8476676787236	80.232	0.65746	81.948	81.758	82.415	1.7167					46	21	3	0	0	0	0.0018752	3	33620	33620;33671;33726		154.75	110.98	1	10548000			35432	4152	17493	17570	41335;41336;41337	41335					0.06415150953898774
TWKAQSTCH	9	Unmodified	_TWKAQSTCH_					0	0	0		ENSG00000198788|ENST00000675028|MUC2	ENSG00000198788|ENST00000675028|MUC2	ENSG00000198788|ENST00000675028|MUC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	354.5664245486259	3	354.499281	1060.47601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.308	1	57.308	56.808	57.808	0								0	0	0	0.42693	1	23915	23915		0.96228	0.50394	1				35433	5083	17494	17571	41338	41338					-0.05180531128144139
TWLLYRDWWCV	11	Unmodified	_TWLLYRDWWCV_					0	0	0			REV__ENST00000484416.5_1_7:140051238-140055490:-|nuORF	REV__ENST00000484416.5_1_7:140051238-140055490:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2531616091728	3	514.251707	1539.73329	0.38582	0.00019841	0.772	0.000397	1.1578	0.00059541	514.2521903901966	14.826	0.30671	15.595	15.432	15.738	0.76937					33	9	5	0	0	0	1.0224	1	6134	6134		2.4348	1.1051	1	8140000	+		35434	13229	17495	17572	41339	41339					-0.014986339748020328
TWLRRRARTRK	11	Unmodified	_TWLRRRARTRK_					0	0	0		ENST00000530973.1_1_11:65111264-65113280:+|nuORF	ENST00000530973.1_1_11:65111264-65113280:+|nuORF	ENST00000530973.1_1_11:65111264-65113280:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	750.4590331912041	2	750.460742	1498.90693	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.12	104.62	105.62	0								0	0	0	0.63775	1	44543	44543		0.30703	0.03801	1				35435	7166	17496	17573	41340	41340					0.17743332636314335
TWLWRKWLIQY	11	Unmodified	_TWLWRKWLIQY_					0	0	0		ENST00000356721.3_1_16:48396017-48396254:-|nuORF	ENST00000356721.3_1_16:48396017-48396254:-|nuORF	ENST00000356721.3_1_16:48396017-48396254:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	796.9406616091728	2	796.940453	1591.86635	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.207	1	97.491	96.991	97.991	0.28442								0	0	0	0.63775	1	40902	40902		0.30703	0	1				35436	5991	17497	17574	41341	41341					0.09409553473392407
TWPRSIRMHL	10	Unmodified	_TWPRSIRMHL_					0	0	0		ENST00000406780.5_1_3:107435634-107447630:+|nuORF	ENST00000406780.5_1_3:107435634-107447630:+|nuORF	ENST00000406780.5_1_3:107435634-107447630:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	432.9049865603447	3	432.904641	1295.69209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.197	1	44.197	43.697	44.697	0								0	0	0	0.64998	1	18494	18494		14.218	6.3721	1				35437	6367	17498	17575	41342	41342					0.05607649776402468
TWPRSIRMHL	10	Unmodified	_TWPRSIRMHL_					0	0	0		ENST00000406780.5_1_3:107435634-107447630:+|nuORF	ENST00000406780.5_1_3:107435634-107447630:+|nuORF	ENST00000406780.5_1_3:107435634-107447630:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	432.9044677615166	3	432.904641	1295.69209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.512	1	43.852	43.352	44.352	1.3399								0	0	0	0.64998	1	17819	17819		14.218	6.3721	1				35438	6367	17498	17575	41343	41343					0.05607649776402468
TWRRRYLRRKE	11	Unmodified	_TWRRRYLRRKE_					0	0	0		ENSG00000284188|ENST00000640271|unknown	ENSG00000284188|ENST00000640271|unknown	ENSG00000284188|ENST00000640271|unknown	MSMS	GG20161007_CRH_Patient100_A02_01	1	810.4753295779228	2	810.471306	1618.92806	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.543	1	44.543	44.043	45.043	0								0	0	0	0.63775	1	18640	18640		0	0	1				35439	5489	17499	17576	41344	41344					0.14335297945194725
TWSADSKVLLF	11	Unmodified	_TWSADSKVLLF_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.8413574099541	2	633.840071	1265.66559	2.7985	0.0017738	-0.0030134	-1.91E-06	2.7955	0.0017719	633.840024289213	64.743	0.52879	66.15	65.923	66.452	1.4071					57	16	5	0	0	0	0.0026772	4	27144	27103;27144;27183;27227		118.21	76.254	1	23281000			35440	2052	17500	17577	41345;41346;41347;41348	41346					0.04338239366029484
TWSADSKVLLF	11	Unmodified	_TWSADSKVLLF_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8417846560478	2	633.840071	1265.66559	2.0822	0.0013198	0.47009	0.00029796	2.5523	0.0016177	633.84033238953	64.195	0.53398	66.123	65.888	66.422	1.928					53	16	4	0	0	0	0.0040191	4	26922	26879;26922;26961;27005		139.38	91.784	1	16838000			35441	2052	17500	17577	41349;41350;41351;41352	41350					0.04338239366029484
TWSLAADLLC	10	Unmodified	_TWSLAADLLC_					0	0	0			REV__ENST00000339157.9_1_20:25281118-25281484:-|nuORF	REV__ENST00000339157.9_1_20:25281118-25281484:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.7729369997978	2	546.773342	1091.53213	2.561	0.0014003	-2.2393	-0.0012244	0.32171	0.0001759	546.7723534214233	79.345	0.71643	80.612	80.378	81.094	1.2668					54	22	4	0	0	0	0.44465	1	33286	33286		30.637	3.0077	1	7295300	+		35442	12485	17501	17578	41353	41353					-0.009973230113018872
TWSWYEWYRWR	11	Unmodified	_TWSWYEWYRWR_					0	0	0			REV__ENST00000299314.11_1_12:102159966-102161843:-|nuORF	REV__ENST00000299314.11_1_12:102159966-102161843:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	859.8961059451103	2	859.896774	1717.779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.523	1	66.523	66.023	67.023	0								0	0	0	0.63775	1	27709	27709		0	0	1		+		35443	12310	17502	17579	41354	41354					-0.05118272468212126
TWTPSALKF	9	Unmodified	_TWTPSALKF_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.7858764529228	2	525.784567	1049.55458	1.2733	0.00066946	1.5164	0.00079729	2.7896	0.0014667	525.7851130310509	55.424	0.29063	56.834	56.647	56.937	1.4099					21	9	3	0	0	0	0.15456	2	23226	23177;23226		38.176	20.029	1	2732300			35444	2985	17503	17580	41355;41356	41356					0.031786444485987886
TWTPSALKF	9	Unmodified	_TWTPSALKF_					0	0	0		ENSG00000142173|ENST00000300527|COL6A2;nc|ENSG00000142173|P12110-3|COL6A2;nc|ENSG00000142173|P12110-2|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	ENSG00000142173|ENST00000300527|COL6A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7858764529228	2	525.784567	1049.55458	0.80463	0.00042306	2.5786	0.0013558	3.3832	0.0017788	525.7851834583571	54.921	0.29451	56.889	56.722	57.017	1.9684					22	9	3	0	0	0	0.1109	1	23027	23027		45.7	21.026	1	2903900			35445	2985	17503	17580	41357	41357					0.031786444485987886
TWVKLQHPKK	10	Unmodified	_TWVKLQHPKK_					0	0	0		ENSG00000187815|ENST00000372706|ZFP69	ENSG00000187815|ENST00000372706|ZFP69	ENSG00000187815|ENST00000372706|ZFP69	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2553283572197	3	422.255669	1263.74518	4.1132	0.0017368	-2.4576	-0.0010377	1.6556	0.00069909	422.25527975731774	90.758	0.89904	91.739	91.14	92.039	0.98156					58	27	3	0	0	0	0.89803	1	38147	38147		0.69767	0	1	1100600			35446	4842	17504	17581	41358	41358					0.12385350830686548
TYAELMQTLRF	11	Unmodified	_TYAELMQTLRF_					0	0	0		ENST00000496641.1_1_7:140710217-140710433:-|nuORF;ENSG00000090263|ENST00000324787|MRPS33	ENST00000496641.1_1_7:140710217-140710433:-|nuORF	ENST00000496641.1_1_7:140710217-140710433:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	686.8505126833916	2	686.850113	1371.68567	1.3844	0.00095086	-0.28514	-0.00019585	1.0992	0.00075501	686.8500866201922	71.803	0.43629	73.145	72.936	73.372	1.3415					36	13	4	0	0	0	0.00059612	2	30126	30126;30181		174.48	141.7	1	4066900			35447	1135	17505	17582	41359;41360	41359					0.014696670343255391
TYAELMQTLRF	11	Unmodified	_TYAELMQTLRF_					0	0	0		ENST00000496641.1_1_7:140710217-140710433:-|nuORF;ENSG00000090263|ENST00000324787|MRPS33	ENST00000496641.1_1_7:140710217-140710433:-|nuORF	ENST00000496641.1_1_7:140710217-140710433:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	686.8508178591728	2	686.850113	1371.68567	1.0568	0.00072586	-0.38682	-0.00026569	0.66997	0.00046017	686.8500805409931	71.32	0.37736	73.144	72.972	73.349	1.824					28	11	3	0	0	0	0.0033244	2	29907	29907;29956		143.21	111.94	1	5783600			35448	1135	17505	17582	41361;41362	41361					0.014696670343255391
TYAPVAFRYF	10	Unmodified	_TYAPVAFRYF_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A;ENST00000486048.2_1_1:151204736-151206704:+|nuORF	nc|ENSG00000180764|A2A3N6|PIPSL	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	617.8207275271416	2	617.816399	1233.61824	2.7439	0.0016952	1.0344	0.00063907	3.7783	0.0023343	617.816599207467	61.479	0.30568	62.897	62.714	63.02	1.4177					18	9	2	0	0	0	0.21003	1	25777	25777		47.749	27.334	1	1028200			35449	6817	17506	17583	41363	41363					0.010780048856986468
TYAPVAFRYF	10	Unmodified	_TYAPVAFRYF_					0	0	0		nc|ENSG00000180764|A2A3N6|PIPSL;ENST00000480546.1_1_10:95718567-95721153:-|nuORF;nc|ENSG00000143398|Q99755-2|PIP5K1A;nc|ENSG00000143398|Q99755-4|PIP5K1A;nc|ENSG00000143398|Q99755-3|PIP5K1A;ENSG00000143398|ENST00000368888|PIP5K1A;ENST00000486048.2_1_1:151204736-151206704:+|nuORF	nc|ENSG00000180764|A2A3N6|PIPSL	nc|ENSG00000180764|A2A3N6|PIPSL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	617.816399	1233.61824	2.547	0.0015736	0.78594	0.00048557	3.333	0.0020592	618.3192705673787	60.876	0.33632	62.841	62.668	63.004	1.9653	-0.027812	-0.00013902	NaN	47.749	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	936980			35450	6817	17506	17583							0.010780048856986468
TYAVPLIQP	9	Unmodified	_TYAVPLIQP_					0	0	0		ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P	ENST00000400706.3_1_12:78799-87272:+|nuORF	ENST00000400706.3_1_12:78799-87272:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	501.8073608279228	2	501.286943	1000.55933	0.90485	0.00045359	1.4321	0.00071789	2.3369	0.0011715	501.28695190544533	77.439	0.49701	79.191	78.882	79.379	1.7514					19	15	2	0	0	0	0.11684	1	32366	32366		7.9102	5.3327	1	752980			35451	6345	17507	17584	41364	41364					0.059075285913763764
TYAVPLIQP	9	Unmodified	_TYAVPLIQP_					0	0	0		ENST00000400706.3_1_12:78799-87272:+|nuORF;ENST00000559163.6_1_15:102506277-102512065:+|nuORF;ENST00000558686.5_1_15:102506217-102512799:+|nuORF;ENST00000559884.5_1_15:102506277-102506794:+|nuORF;ENST00000557932.5_1_15:102506277-102513446:+|nuORF;nc|ENSG00000185596|C4AMC7|WASH3P;nc|ENSG00000291134|Q6VEQ5|WASH2P	ENST00000400706.3_1_12:78799-87272:+|nuORF	ENST00000400706.3_1_12:78799-87272:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	501.286943	1000.55933	2.5335	0.00127	-1.6906	-0.00084748	0.8429	0.00042253	501.28659641950026	77.749	0.46045	79.03	78.888	79.348	1.2809	-0.080354	-0.0021528	NaN	7.9102	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2444500			35452	6345	17507	17584							0.059075285913763764
TYAYLFKYI	9	Unmodified	_TYAYLFKYI_					0	0	0		ENST00000485996.1_1_14:21944657-21945031:-|nuORF;ENST00000475857.1_1_14:21942908-21945031:-|nuORF;ENSG00000129472|ENST00000397762|RAB2B	ENST00000485996.1_1_14:21944657-21945031:-|nuORF	ENST00000485996.1_1_14:21944657-21945031:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3174316287041	2	591.3157	1180.61685	3.0979	0.0018319	-0.058708	-3.4715E-05	3.0392	0.0017971	591.3158437818046	70.646	0.34895	72	71.873	72.222	1.3536					22	10	3	0	0	0	0.049839	1	29648	29648		68.081	43.407	1	1506700			35453	2404	17508	17585	41365	41365					0.033763707969455936
TYAYLFKYI	9	Unmodified	_TYAYLFKYI_					0	0	0		ENST00000485996.1_1_14:21944657-21945031:-|nuORF;ENST00000475857.1_1_14:21942908-21945031:-|nuORF;ENSG00000129472|ENST00000397762|RAB2B	ENST00000485996.1_1_14:21944657-21945031:-|nuORF	ENST00000485996.1_1_14:21944657-21945031:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3197509646416	2	591.3157	1180.61685	2.2681	0.0013412	0.019706	1.1653E-05	2.2879	0.0013528	591.3157818949738	70.162	0.41146	71.999	71.817	72.228	1.8378					23	12	3	0	0	0	0.10993	1	29402	29402		46.021	21.347	1	849480			35454	2404	17508	17585	41366	41366					0.033763707969455936
TYCYRCDDF	9	Unmodified	_TYCYRCDDF_					0	0	0		ENSG00000140455|ENST00000380324|USP3	ENSG00000140455|ENST00000380324|USP3	ENSG00000140455|ENST00000380324|USP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.2209960818291	2	593.220617	1184.42668	2.4994	0.0014827	-1.0073	-0.00059752	1.4921	0.00088515	593.2197113360031	77.721	0.40743	79.002	78.76	79.167	1.2809					37	12	4	0	0	0	0.59203	1	32650	32650		11.64	3.047	1	2618300			35455	2918	17509	17586	41367	41367					-0.15815607199238002
TYDEIFYTL	9	Unmodified	_TYDEIFYTL_					0	0	0		ENSG00000110047|ENST00000320631|EHD1;ENST00000484846.1_1_11:64621807-64623066:-|nuORF	ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7785522341728	2	582.776605	1163.53866	2.4742	0.0014419	1.5734	0.00091696	4.0477	0.0023589	582.7785184117937	76.407	0.36868	77.701	77.519	77.887	1.2938					22	11	3	0	0	0	0.022807	1	32088	32088		97.075	64.769	1	2065500			35456	1691	17510	17587	41368	41368					-0.03657106578953062
TYDEIFYTL	9	Unmodified	_TYDEIFYTL_					0	0	0		ENSG00000110047|ENST00000320631|EHD1;ENST00000484846.1_1_11:64621807-64623066:-|nuORF	ENSG00000110047|ENST00000320631|EHD1	ENSG00000110047|ENST00000320631|EHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.7794067263603	2	582.776605	1163.53866	2.6784	0.0015609	0.64685	0.00037697	3.3252	0.0019379	582.7775272043531	75.938	0.33723	77.705	77.507	77.845	1.7672					22	10	3	0	0	0	0.12174	1	31857	31857		42.095	27.256	1	2577900			35457	1691	17510	17587	41369	41369					-0.03657106578953062
TYDYNFHSF	9	Unmodified	_TYDYNFHSF_					0	0	0		nc|ENSG00000116539|Q9NR48|ASH1L;ENSG00000116539|ENST00000392403|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.2493163943291	2	597.248546	1192.48254	1.8227	0.0010886	-0.14385	-8.5914E-05	1.6788	0.0010027	597.2487699586364	42.536	0.31476	43.876	43.7	44.014	1.3399					22	9	3	0	0	0	0.044893	1	17814	17814		71.922	49.186	1	3372100			35458	1971	17511	17588	41370	41370					-0.10600314695761881
TYDYNFHSF	9	Unmodified	_TYDYNFHSF_					0	0	0		nc|ENSG00000116539|Q9NR48|ASH1L;ENSG00000116539|ENST00000392403|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	nc|ENSG00000116539|Q9NR48|ASH1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2493774294853	2	597.248546	1192.48254	1.7545	0.0010479	-0.34423	-0.00020559	1.4103	0.00084229	597.2484732491231	42.027	0.30977	43.949	43.763	44.072	1.9211					21	9	3	0	0	0	0.033504	2	17639	17588;17639		81.89	57.87	1	2470700			35459	1971	17511	17588	41371;41372	41372					-0.10600314695761881
TYEAQFFGF	9	Unmodified	_TYEAQFFGF_					0	0	0		ENSG00000167842|ENST00000611091|MIS12;MIS12|p.V58Gfs*14|1|0.07|ENSG00000167842|chr17:5489035-5489035|T/-|frameshift_variant	ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2525512576103	2	555.250557	1108.48656	2.5209	0.0013997	0.95816	0.00053202	3.479	0.0019317	555.250962834137	76.747	0.50169	78.04	77.825	78.326	1.2938					37	15	3	0	0	0	0.059546	2	32231	32231;32286		64.236	37.353	1	3129000			35460	3997	17512	17589	41373;41374	41373					-0.06334225202044763
TYEAQFFGF	9	Unmodified	_TYEAQFFGF_					0	0	0		ENSG00000167842|ENST00000611091|MIS12;MIS12|p.V58Gfs*14|1|0.07|ENSG00000167842|chr17:5489035-5489035|T/-|frameshift_variant	ENSG00000167842|ENST00000611091|MIS12	ENSG00000167842|ENST00000611091|MIS12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2524291872978	2	555.250557	1108.48656	2.6859	0.0014913	0.81064	0.00045011	3.4965	0.0019415	555.2509882966756	76.332	0.44191	78.099	77.813	78.255	1.7672					32	13	3	0	0	0	0.031324	2	31995	31995;32051		85.357	51.254	1	3298400			35461	3997	17512	17589	41375;41376	41375					-0.06334225202044763
TYEDLINKI	9	Unmodified	_TYEDLINKI_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;DNMT1|p.D701Tfs*87|1|0.11|ENSG00000130816|chr19:10151514-10151515|-/CTTGACTTGCATGGTCCTCTGTTACTTAAAGT|frameshift_variant	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7974731326103	2	554.797872	1107.58119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.538	1	48.509	48.009	49.009	1.9703								0	0	0	0.3792	1	19495	19495		10.824	0	1				35462	2463	17513	17590	41377	41377					0.0317028854929049
TYEEVFYFV	9	Unmodified	_TYEEVFYFV_					0	0	0		nc|ENSG00000078269|O15056-3|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENSG00000078269|ENST00000355585|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.7823974490166	2	598.779148	1195.54374	2.5425	0.0015224	0.14212	8.51E-05	2.6846	0.0016075	598.7794917922432	83.134	0.46797	84.322	84.142	84.61	1.1879					28	14	3	0	0	0	0.051699	2	34910	34869;34910		67.344	38.857	1	2346900			35463	975	17514	17591	41378;41379	41379					-0.04620802716340222
TYEEVFYFV	9	Unmodified	_TYEEVFYFV_					0	0	0		nc|ENSG00000078269|O15056-3|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENSG00000078269|ENST00000355585|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.7816039919853	2	598.779148	1195.54374	2.8311	0.0016952	-0.86771	-0.00051956	1.9634	0.0011757	598.7787706274866	82.672	0.39668	84.342	84.113	84.51	1.67					30	12	3	0	0	0	0.01705	3	34669	34625;34669;34719		101.72	57.315	1	3100200			35464	975	17514	17591	41380;41381;41382	41381					-0.04620802716340222
TYEGIFKTL	9	Unmodified	_TYEGIFKTL_					0	0	0		ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ATXN2L|p.P765Sfs*253|1|0.19|ENSG00000168488|chr16:28834550-28834587|GCCCCGCCGATGATGCAGGCCGCCGCGGCTGCTGGCCC/-|frameshift_variant;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	ENST00000561539.1_1_16:28836974-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2910034060478	2	536.289682	1070.56481	1.2246	0.00065675	-0.34002	-0.00018235	0.88459	0.00047439	536.2897462469352	52.211	0.37697	53.608	53.428	53.804	1.3966					29	11	3	0	0	0	0.028318	2	21873	21834;21873		90.135	66.114	1	6460700			35465	7335;95	17515	17592	41383;41384	41384					0.0323520738318166
TYEGIFKTL	9	Unmodified	_TYEGIFKTL_					0	0	0		ENST00000561539.1_1_16:28836974-28837213:+|nuORF;ENST00000566080.1_1_16:28837054-28837213:+|nuORF;ENST00000562867.5_1_16:28834808-28837752:+|nuORF;ENST00000432006.1_1_7:16625648-16626215:-|nuORF;nc|ENSG00000168488|Q8WWM7-7|ATXN2L;nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ATXN2L|p.P765Sfs*253|1|0.19|ENSG00000168488|chr16:28834550-28834587|GCCCCGCCGATGATGCAGGCCGCCGCGGCTGCTGGCCC/-|frameshift_variant;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	ENST00000561539.1_1_16:28836974-28837213:+|nuORF;nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2898437380791	2	536.289682	1070.56481	0.83725	0.00044901	-1.3911	-0.00074602	-0.55383	-0.00029701	536.2895266360875	51.572	0.40461	53.547	53.367	53.771	1.9747					30	12	3	0	0	0	0.033102	3	21587	21587;21635;21682		82.529	58.509	1	4984900			35466	7335;95	17515	17592	41385;41386;41387	41385					0.0323520738318166
TYEHNDWI	8	Unmodified	_TYEHNDWI_					0	0	0		ENST00000569516.5_1_16:904534-921479:-|nuORF;nc|ENSG00000103227|Q96S06-2|LMF1;ENSG00000103227|ENST00000262301|LMF1	ENST00000569516.5_1_16:904534-921479:-|nuORF	ENST00000569516.5_1_16:904534-921479:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2373535037041	2	539.235439	1076.45632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.006	1	46.966	46.466	47.466	1.9596								0	0	0	1.0178	1	18858	18858		5.7604	1.0044	1				35467	1423	17516	17593	41388	41388					-0.07884583867257788
TYEKFFGLL	9	Unmodified	_TYEKFFGLL_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3004638552666	2	559.30005	1116.58555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.072	1	72.413	71.913	72.913	1.3415								0	0	0	0.00063289	1	29825	29825		103.42	45.948	1				35468	3691	17517	17594	41389	41389					0.031917977628836525
TYEKFFGLL	9	Unmodified	_TYEKFFGLL_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3011352419853	2	559.30005	1116.58555	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.189	1	72.53	72.03	73.03	1.3415								0	0	0	8.2162E-07	1	29875	29875		114.2	49.965	1				35469	3691	17517	17594	41390	41390					0.031917977628836525
TYEKFFGLL	9	Unmodified	_TYEKFFGLL_					0	0	0		ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	ENSG00000163510|ENST00000410053|CWC22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3019286990166	2	559.30005	1116.58555	1.1623	0.00065006	3.3264	0.0018605	4.4887	0.0025105	559.3004739206607	70.68	0.33072	72.518	72.26	72.591	1.8378					31	10	4	0	0	0	0.026411	2	29666	29591;29666		93.166	44.82	1	21492000			35470	3691	17517	17594	41391;41392	41392					0.031917977628836525
TYELIHTGEM	10	Unmodified	_TYELIHTGEM_					0	0	0		ENSG00000062370|ENST00000354340|ZNF112;nc|ENSG00000062370|Q9UJU3|ZNF112	ENSG00000062370|ENST00000354340|ZNF112	ENSG00000062370|ENST00000354340|ZNF112	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2780639529228	2	597.278989	1192.54342	3.3039	0.0019734	0.479	0.0002861	3.7829	0.0022595	597.2790018211841	81.303	0.39977	82.999	82.766	83.166	1.6959					29	12	3	0	0	0	0.65574	1	34067	34067		20.454	4.6064	1	3577000			35471	755	17518	17595	41393	41393					-0.04514545707843354
TYENLIHVW	9	Unmodified	_TYENLIHVW_					0	0	0		ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7;chr16:2175953-2176265|133|16.1|0.48|5.08|+|0|TRAF7,TRAF7|1	ENSG00000131653|ENST00000326181|TRAF7	ENSG00000131653|ENST00000326181|TRAF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7983886599541	2	587.798206	1173.58186	2.503	0.0014712	-1.2348	-0.00072584	1.2681	0.00074541	587.7977303592871	59.636	0.37391	61.055	60.862	61.236	1.4196					25	11	3	0	0	0	0.042029	1	25008	25008		74.423	48.155	1	1616500			35472	2499	17519	17596	41394	41394					0.0020112798899845075
TYENLIHVW	9	Unmodified	_TYENLIHVW_					0	0	0		ENSG00000131653|ENST00000326181|TRAF7;nc|ENSG00000131653|Q6Q0C0-2|TRAF7;chr16:2175953-2176265|133|16.1|0.48|5.08|+|0|TRAF7,TRAF7|1	ENSG00000131653|ENST00000326181|TRAF7	ENSG00000131653|ENST00000326181|TRAF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.7991210818291	2	587.798206	1173.58186	2.5376	0.0014916	-0.45896	-0.00026978	2.0786	0.0012218	587.7979045991711	59.15	0.34773	61.119	60.908	61.256	1.969					25	10	3	0	0	0	0.037761	1	24811	24811		78.149	46.881	1	1513700			35473	2499	17519	17596	41395	41395					0.0020112798899845075
TYETTLEK	8	Unmodified	_TYETTLEK_					0	0	0		ENSG00000163631|ENST00000295897|ALB;CON__P02768-1;nc|ENSG00000163631|P02768-2|ALB	ENSG00000163631|ENST00000295897|ALB	ENSG00000163631|ENST00000295897|ALB	MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7476379275322	2	492.747847	983.481142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.951	1	15.72	15.22	16.22	0.76937								0	0	0	1.0178	1	6213	6213		15.847	5.6638	1			+	35474	340	17520	17597	41396	41396					-0.011259487845222793
TYFDKNYNL	9	Unmodified	_TYFDKNYNL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;ENST00000467758.1_1_1:62941350-62941566:-|nuORF	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.2816039919853	2	589.279846	1176.54514	0.24955	0.00014706	1.0724	0.00063194	1.3219	0.00077899	589.2807122910621	36.522	0.20609	37.799	37.667	37.873	1.2762					14	9	2	0	0	0	0.15456	1	15331	15331		38.176	11.907	1	1084500			35475	1975	17521	17598	41397	41397					-0.03607168627581814
TYFDKNYNL	9	Unmodified	_TYFDKNYNL_					0	0	0		nc|ENSG00000116641|Q96N67-4|DOCK7;nc|ENSG00000116641|Q96N67-3|DOCK7;nc|ENSG00000116641|Q96N67-5|DOCK7;nc|ENSG00000116641|Q96N67-2|DOCK7;nc|ENSG00000116641|Q96N67-6|DOCK7;ENSG00000116641|ENST00000635253|DOCK7;ENST00000467758.1_1_1:62941350-62941566:-|nuORF	nc|ENSG00000116641|Q96N67-4|DOCK7	nc|ENSG00000116641|Q96N67-4|DOCK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2820312380791	2	589.279846	1176.54514	0.78373	0.00046184	1.0812	0.0006371	1.8649	0.0010989	589.2806267353542	35.956	0.24116	37.773	37.63	37.871	1.8176					16	12	2	0	0	0	0.17276	1	15059	15059		36.127	13.391	1	1830500			35476	1975	17521	17598	41398	41398					-0.03607168627581814
TYFFAHGSIC	10	Unmodified	_TYFFAHGSIC_					0	0	0			REV__ENSG00000112818|ENST00000230588|MEP1A	REV__ENSG00000112818|ENST00000230588|MEP1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.2583495974541	2	573.257859	1144.50117	2.3227	0.0013315	-3.1395	-0.0017997	-0.81684	-0.00046826	573.2556725327922	63.192	0.34564	65.137	64.934	65.279	1.9444					23	10	3	0	0	0	0.82019	1	26503	26503		10.074	1.4806	1	1629200	+		35477	9370	17522	17599	41399	41399					-0.06530476325542622
TYFGVLPPKC	10	Unmodified	_TYFGVLPPKC_					0	0	0			REV__ENST00000604263.1_1_7:72233822-72234023:+|nuORF	REV__ENST00000604263.1_1_7:72233822-72234023:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2963134646416	2	562.794078	1123.5736	1.1574	0.00065136	-1.7944	-0.0010099	-0.63704	-0.00035852	563.293612047496	52.588	0.8742	54.56	53.862	54.736	1.9722					50	27	3	0	0	0	0.6819	1	22005	22005		19.257	1.1106	1	3612800	+		35478	14131	17523	17600	41400	41400					0.016758577480004533
TYFNSHEGISF	11	Unmodified	_TYFNSHEGISF_					0	0	0		tr|A0A553SQY1|A0A553SQY1_NIACIPhosphataseOS=NialliacirculansOX=1397GN=CEQ21_07305PE=4SV=1	tr|A0A553SQY1|A0A553SQY1_NIACIPhosphataseOS=NialliacirculansOX=1397GN=CEQ21_07305PE=4SV=1	tr|A0A553SQY1|A0A553SQY1_NIACIPhosphataseOS=NialliacirculansOX=1397GN=CEQ21_07305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	651.2956420779228	2	651.293485	1300.57242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.742	1	38.019	37.519	38.519	1.2762								0	0	0	0.63775	1	15422	15422		5.7319	1.7875	1				35479	16536	17524	17601	41401	41401					-0.06584685087204889
TYFRFQEEI	9	Unmodified	_TYFRFQEEI_					0	0	0		ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	ENSG00000121858|ENST00000241261|TNFSF10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8021728396416	2	616.800946	1231.58734	1.4483	0.00089333	3.0986	0.0019112	4.547	0.0028046	616.8022217201623	49.858	0.31155	51.835	51.665	51.977	1.9772					20	9	3	0	0	0	0.18337	1	20855	20855		34.932	9.9411	1	1053600			35480	2142	17525	17602	41402	41402					-0.019191932191688466
TYFSTPLLL	9	Unmodified	_TYFSTPLLL_					0	0	0		ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7953979372978	2	527.794601	1053.57465	2.008	0.0010598	-0.11995	-6.331E-05	1.888	0.00099649	527.7943657100814	84.689	0.43343	85.848	85.622	86.056	1.159					40	13	4	0	0	0	0.046276	3	35520	35474;35520;35574		70.716	35.716	1	9563200			35481	3160	17526	17603	41403;41404;41405	41404					0.05000395388583456
TYFSTPLLL	9	Unmodified	_TYFSTPLLL_					0	0	0		ENST00000424167.2_1_7:75689738-75694307:+|nuORF;nc|ENSG00000146701|P40926-2|MDH2;ENSG00000146701|ENST00000315758|MDH2	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	ENST00000424167.2_1_7:75689738-75694307:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7947875857353	2	527.794601	1053.57465	2.2725	0.0011994	-0.53555	-0.00028266	1.737	0.00091678	527.7939719865462	84.214	0.48537	85.815	85.521	86.006	1.6002					37	15	4	0	0	0	0.046276	3	35312	35261;35312;35368		70.716	26.309	1	9973500			35482	3160	17526	17603	41406;41407;41408	41407					0.05000395388583456
TYGDIKIML	9	Unmodified	_TYGDIKIML_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2879516482353	2	527.286085	1052.55762	1.7604	0.00092822	4.0374	0.0021288	5.7977	0.0030571	527.2881530984779	57.028	0.3932	58.442	58.214	58.607	1.4145					28	12	3	0	0	0	0.15635	1	23837	23837		37.974	9.4872	1	5409500			35483	745	17527	17604	41409	41409					0.0334415151110079
TYGDIKIML	9	Unmodified	_TYGDIKIML_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2850829958916	2	527.286085	1052.55762	1.1284	0.00059501	4.262	0.0022473	5.3905	0.0028423	527.2886968564171	56.444	0.45461	58.412	58.149	58.603	1.9684					35	14	3	0	0	0	0.32838	1	23603	23603		24.021	2.2739	1	3953400			35484	745	17527	17604	41410	41410					0.0334415151110079
TYGEIFEKF	9	Unmodified	_TYGEIFEKF_					0	0	0		nc|ENSG00000151366|O95298-2|NDUFC2;ENSG00000151366|ENST00000281031|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	nc|ENSG00000151366|O95298-2|NDUFC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.2798339724541	2	567.279315	1132.54408	0.98721	0.00056002	-1.1331	-0.00064277	-0.14587	-8.2752E-05	567.2786084559248	52.773	0.66517	54.745	54.448	55.113	1.9722					94	32	4	0	0	0	0.026411	5	22036	22036;22085;22127;22171;22210		93.166	51.326	1	112270000			35485	3286	17528	17605	41411;41412;41413;41414;41415	41411					-0.016893829964601537
TYGGSWKF	8	Unmodified	_TYGGSWKF_					0	0	0		nc|ENSG00000146416|Q9NVV5-6|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-4|AIG1;ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1;AIG1|p.L42V|1|0.56|ENSG00000146416|chr6:143061049-143061049|C/G|missense_variant	nc|ENSG00000146416|Q9NVV5-6|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2281982302666	2	473.226885	944.439217	1.3977	0.00066145	0.55399	0.00026216	1.9517	0.00092361	473.22717759872705	38.014	0.27775	39.298	39.216	39.494	1.284					16	9	2	0	0	0	0.64178	1	15968	15968		36.127	14.38	1	2568500			35486	3153	17529	17606	41416	41416					-0.035224596823809406
TYGGSWKF	8	Unmodified	_TYGGSWKF_					0	0	0		nc|ENSG00000146416|Q9NVV5-6|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-4|AIG1;ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1;AIG1|p.L42V|1|0.56|ENSG00000146416|chr6:143061049-143061049|C/G|missense_variant	nc|ENSG00000146416|Q9NVV5-6|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2269775271416	2	473.226885	944.439217	1.0184	0.00048191	0.099832	4.7243E-05	1.1182	0.00052916	473.2270599517016	37.404	0.3055	39.224	39.097	39.403	1.8202					23	10	3	0	0	0	0.69649	1	15674	15674		30.637	12.502	1	1757300			35487	3153	17529	17606	41417	41417					-0.035224596823809406
TYGGSWKFLTF	11	Unmodified	_TYGGSWKFLTF_					0	0	0		nc|ENSG00000146416|Q9NVV5-6|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-4|AIG1;ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	653.8289672732353	2	653.826963	1305.63937	3.2506	0.0021254	-0.50793	-0.0003321	2.7427	0.0017933	653.8266192978098	73.041	0.40563	74.37	74.164	74.569	1.3297					35	12	4	0	0	0	0.027424	2	30633	30633;30687		85.764	58.136	1	3589600			35488	3153	17530	17607	41418;41419	41418					-0.001220298054477098
TYGGSWKFLTF	11	Unmodified	_TYGGSWKFLTF_					0	0	0		nc|ENSG00000146416|Q9NVV5-6|AIG1;nc|ENSG00000146416|Q9NVV5-5|AIG1;nc|ENSG00000146416|Q9NVV5-3|AIG1;nc|ENSG00000146416|Q9NVV5-4|AIG1;ENSG00000146416|ENST00000357847|AIG1;nc|ENSG00000146416|Q9NVV5-1|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	nc|ENSG00000146416|Q9NVV5-6|AIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	653.8281738162041	2	653.826963	1305.63937	2.6798	0.0017521	-0.2132	-0.00013939	2.4666	0.0016127	653.8268899600796	72.487	0.40685	74.297	74.105	74.512	1.8101					31	12	3	0	0	0	0.027832	2	30399	30399;30451		83.278	59.257	1	3618500			35489	3153	17530	17607	41420;41421	41420					-0.001220298054477098
TYGPEGNLIL	10	Unmodified	_TYGPEGNLIL_					0	0	0			REV__ENSG00000004846|ENST00000404938|ABCB5	REV__ENSG00000004846|ENST00000404938|ABCB5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.7876464724541	2	538.784764	1075.55498	2.1592	0.0011634	4.0924	0.0022049	6.2516	0.0033683	538.7870947708988	84.679	0.34126	85.838	85.622	85.964	1.159					18	10	2	0	0	0	0.74985	1	35512	35512		16.149	0.30192	1	2434700	+		35490	8490	17531	17608	41422	41422					0.020220193778186513
TYGPSFPAF	9	Unmodified	_TYGPSFPAF_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	986.4644042849541	1	986.46181	985.454533	3.4296	0.0033832	-2.251	-0.0022205	1.1786	0.0011626	986.4599692729932	65.832	0.42902	67.231	66.941	67.37	1.3989					30	13	3	0	0	0	0.09539	2	27580	27580;27628		50.855	24.587	1	4512100			35491	4148	17532	17609	41423;41424	41423					-0.03877592885191916
TYGPSFPAF	9	Unmodified	_TYGPSFPAF_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.7339660525322	2	493.734543	985.454533	2.3907	0.0011804	-3.5423	-0.001749	-1.1516	-0.0005686	493.73236944832854	65.802	0.76877	67.2	66.601	67.37	1.3989					39	24	3	0	0	0	0.1735	1	27584	27584		36.044	12.896	1	2451500			35492	4148	17532	17609	41425	41425					-0.03877592885191916
TYGPSFPAF	9	Unmodified	_TYGPSFPAF_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	986.4626953005791	1	986.46181	985.454533	2.1563	0.0021271	-0.84669	-0.00083522	1.3096	0.0012919	986.4612250570264	65.352	0.43434	67.26	67.032	67.466	1.9085					30	13	3	0	0	0	0.042029	2	27374	27374;27419		74.423	38.296	1	3845600			35493	4148	17532	17609	41426;41427	41426					-0.03877592885191916
TYGPSFPAF	9	Unmodified	_TYGPSFPAF_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB;nc|ENSG00000170471|Q86X10-2|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.7338439822197	2	493.734543	985.454533	1.8686	0.00092259	-3.1361	-0.0015484	-1.2675	-0.0006258	493.73268996829415	65.411	0.71541	67.319	66.751	67.466	1.9085					40	22	3	0	0	0	0.11478	2	27398	27398;27447		44.407	15.92	1	3140700			35494	4148	17532	17609	41428;41429	41428					-0.03877592885191916
TYGVSFFLV	9	Unmodified	_TYGVSFFLV_					0	0	0		ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1;TLN1|p.D1277Afs*54|1|0.12|ENSG00000137076|chr9:35711644-35711645|-/G|frameshift_variant;TLN2|p.A451Gfs*14|1|0.13|ENSG00000171914|chr15:62697744-62697745|-/A|frameshift_variant;TLN2|p.K1007*|1|0.28|ENSG00000171914|chr15:62722378-62722396|CCAAAGCCGCAGTGCCCAC/-|frameshift_variant;ENSG00000171914|ENST00000636159|TLN2;TLN2|p.L2360Pfs*51|1|0.07|ENSG00000171914|chr15:62833577-62833578|-/T|frameshift_variant	ENSG00000137076|ENST00000314888|TLN1;ENSG00000171914|ENST00000636159|TLN2	ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1032.548266589642	1	1032.54006	1031.53278	3.9137	0.0040411	1.036	0.0010697	4.9498	0.0051108	1032.5418245178332	90.219	0.54233	91.239	90.894	91.437	1.0199					17	16	2	0	0	0	0.24063	1	38008	38008		28.487	9.0478	1	1033500			35495	2757;4219	17533	17610	41430	41430					0.018278397000358382
TYHGVFVNI	9	Unmodified	_TYHGVFVNI_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C;ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2755004763603	2	525.274367	1048.53418	2.3354	0.0012267	-0.2824	-0.00014834	2.053	0.0010784	525.2743007344214	47.264	0.41628	48.647	48.442	48.858	1.3825					35	12	4	0	0	0	0.026628	3	19783	19742;19783;19832		92.822	38.049	1	7321900			35496	3475	17534	17611	41431;41432;41433	41432					0.01185473788791569
TYHGVFVNI	9	Unmodified	_TYHGVFVNI_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C;ENST00000492514.1_1_21:38610748-38639601:-|nuORF;ENST00000475009.1_1_21:38610748-38639643:-|nuORF;nc|ENSG00000157538|O14972-2|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.2754394412041	2	525.274367	1048.53418	2.0551	0.0010795	-0.20402	-0.00010717	1.8511	0.00097231	525.2742580017068	46.766	0.37313	48.742	48.561	48.934	1.976					34	11	4	0	0	0	0.045797	3	19600	19551;19600;19641		71.134	21.201	1	6310100			35497	3475	17534	17611	41434;41435;41436	41435					0.01185473788791569
TYHPGVPVF	9	Unmodified	_TYHPGVPVF_					0	0	0		ENST00000533739.1_1_11:89951170-89956122:-|nuORF;ENST00000533724.5_1_11:89947115-89956122:-|nuORF;ENST00000581139.1_1_18:2946096-2946618:-|nuORF;nc|ENSG00000110172|Q9UHD1-2|CHORDC1;ENSG00000110172|ENST00000320585|CHORDC1	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	ENST00000533739.1_1_11:89951170-89956122:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7654296755791	2	508.763635	1015.51272	2.2861	0.0011631	0.8687	0.00044196	3.1548	0.0016051	508.7641080144698	42.215	0.34939	43.555	43.35	43.7	1.3399					18	10	2	0	0	0	0.12174	1	17693	17693		42.095	18.946	1	1185400			35498	1700	17535	17612	41437	41437					0.0055808876010132735
TYIDTRTVF	9	Unmodified	_TYIDTRTVF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.2914916872978	2	558.290214	1114.56587	2.2655	0.0012648	-0.1716	-9.5801E-05	2.0939	0.001169	558.290072465457	41.437	0.41672	42.762	42.587	43.004	1.3254					42	12	4	0	0	0	0.050451	3	17362	17325;17362;17401		67.838	24.066	1	18484000			35499	959	17536	17613	41438;41439;41440	41439					0.013174217521054743
TYIDTRTVF	9	Unmodified	_TYIDTRTVF_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2915527224541	2	558.290214	1114.56587	1.9753	0.0011028	0.34859	0.00019462	2.3239	0.0012974	558.2904341703265	41.017	0.38266	42.91	42.736	43.119	1.8927					38	11	4	0	0	0	0.071837	3	17193	17146;17193;17232		59.368	22.862	1	17815000			35500	959	17536	17613	41441;41442;41443	41442					0.013174217521054743
TYIDTRTVFL	10	Unmodified	_TYIDTRTVFL_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.8329345583916	2	614.832246	1227.64994	0.48145	0.00029601	0.77211	0.00047472	1.2536	0.00077073	614.8326920373808	56.37	0.39042	57.782	57.608	57.999	1.4123					29	12	3	0	0	0	0.068876	2	23648	23599;23648		70.929	38.143	1	5968000			35501	959	17537	17614	41444;41445	41445					0.04521952849017907
TYIDTRTVFL	10	Unmodified	_TYIDTRTVFL_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.8330566287041	2	614.832246	1227.64994	0.76353	0.00046944	-0.54477	-0.00033494	0.21876	0.0001345	614.8320221785033	55.845	0.32881	57.813	57.666	57.995	1.9684					18	10	2	0	0	0	0.057855	2	23393	23393;23443		75.571	47.942	1	6633200			35502	959	17537	17614	41446;41447	41446					0.04521952849017907
TYIFHQLLD	9	Unmodified	_TYIFHQLLD_					0	0	0		ENST00000486101.1_1_17:73894933-73895551:-|nuORF;nc|ENSG00000204316|Q96DV4-2|MRPL38;ENSG00000204316|ENST00000309352|MRPL38	ENST00000486101.1_1_17:73894933-73895551:-|nuORF	ENST00000486101.1_1_17:73894933-73895551:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3035156130791	2	575.300581	1148.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.704	1	38.988	38.488	39.488	1.284								0	0	0	0.42693	1	15828	15828		2.0598	0	1				35503	5133	17538	17615	41448	41448					0.018260121317553057
TYIIFDKK	8	Unmodified	_TYIIFDKK_					0	0	0			REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2960693240166	2	514.294768	1026.57498	2.6765	0.0013765	0.25713	0.00013224	2.9336	0.0015087	514.2948027169294	47.491	0.41676	48.874	48.663	49.079	1.3825					26	12	3	0	0	0	0.64178	2	19886	19839;19886		36.127	10.728	1	3733000	+		35504	15637	17539	17616	41449;41450	41450					0.06275815108415372
TYIIFDKK	8	Unmodified	_TYIIFDKK_					0	0	0			REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2960082888603	2	514.294768	1026.57498	2.5946	0.0013344	0.31157	0.00016024	2.9061	0.0014946	514.2948723952817	47	0.34897	48.976	48.808	49.156	1.976					24	10	3	0	0	0	0.55531	1	19704	19704		43.858	1.7637	1	3477300	+		35505	15637	17539	17616	41451	41451					0.06275815108415372
TYIIFDKK	8	Unmodified	_TYIIFDKK_					0	0	0			REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	514.294768	1026.57498	2.6765	0.0013765	0.25713	0.00013224	2.9336	0.0015087	514.2948027169294	47.491	0.41676	48.874	48.663	49.079	1.3825	-0.05083	-2.8095E-05	NaN	43.858	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3733000	+		35506	15637	17539	17616							0.06275815108415372
TYIIFDKK	8	Unmodified	_TYIIFDKK_					0	0	0			REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	REV__tr|A0A7D6ZG38|A0A7D6ZG38_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20660PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	514.294768	1026.57498	2.5946	0.0013344	0.31157	0.00016024	2.9061	0.0014946	514.2948723952817	47	0.34897	48.976	48.808	49.156	1.976	0.05083	2.79E-05	NaN	43.858	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3477300	+		35507	15637	17539	17616							0.06275815108415372
TYIKFINLF	9	Unmodified	_TYIKFINLF_					0	0	0		ENSG00000196961|ENST00000354293|AP2A1;nc|ENSG00000196961|O95782|AP2A1;ENST00000597774.5_1_19:50303271-50309027:+|nuORF	ENSG00000196961|ENST00000354293|AP2A1	ENSG00000196961|ENST00000354293|AP2A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.8340331912041	2	579.831517	1157.64848	2.6315	0.0015258	1.2329	0.0007149	3.8644	0.0022407	579.8318756760845	78.736	0.46778	80.003	79.817	80.284	1.2668					37	14	3	0	0	0	0.060242	2	33027	33027;33077		63.961	29.559	1	3446500			35508	4972	17540	17617	41452;41453	41452					0.0759636355087423
TYIKFINLF	9	Unmodified	_TYIKFINLF_					0	0	0		ENSG00000196961|ENST00000354293|AP2A1;nc|ENSG00000196961|O95782|AP2A1;ENST00000597774.5_1_19:50303271-50309027:+|nuORF	ENSG00000196961|ENST00000354293|AP2A1	ENSG00000196961|ENST00000354293|AP2A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8339111208916	2	579.831517	1157.64848	1.9613	0.0011372	1.6168	0.00093745	3.5781	0.0020747	579.8324154735808	78.229	0.52794	79.964	79.73	80.258	1.735					37	16	3	0	0	0	0.039278	2	32782	32782;32831		76.825	42.423	1	3223500			35509	4972	17540	17617	41454;41455	41454					0.0759636355087423
TYINPFVSF	9	Unmodified	_TYINPFVSF_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B;ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B	ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1087.550463855267	1	1087.54587	1086.5386	3.3945	0.0036916	-2.1161	-0.0023014	1.2784	0.0013903	1087.5444525243067	81.719	0.43321	82.952	82.749	83.182	1.2332					24	13	3	0	0	0	0.019486	2	34324	34279;34324		99.755	47.487	1	2885200			35510	1832;2856	17541	17618	41456;41457	41457					-0.0012106178828616976
TYINPFVSF	9	Unmodified	_TYINPFVSF_					0	0	0		ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000113615|O95486-2|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B;ENSG00000138802|ENST00000265175|SEC24B;nc|ENSG00000138802|O95487-3|SEC24B	ENSG00000113615|ENST00000398844|SEC24A;nc|ENSG00000138802|O95487-2|SEC24B	ENSG00000113615|ENST00000398844|SEC24A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1087.547167956829	1	1087.54587	1086.5386	3.4527	0.0037549	-1.0721	-0.001166	2.3805	0.002589	1087.5444825119657	81.259	0.3676	82.955	82.798	83.166	1.6959					18	11	2	0	0	0	0.02878	2	34130	34078;34130		89.401	39.468	1	2556300			35511	1832;2856	17541	17618	41458;41459	41459					-0.0012106178828616976
TYIPGTQITF	10	Unmodified	_TYIPGTQITF_					0	0	0		ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF	ENSG00000141027|ENST00000268712|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8014404177666	2	570.800414	1139.58628	2.0794	0.0011869	3.9574	0.0022589	6.0368	0.0034458	570.7996993726811	68.871	0.38466	70.237	70.028	70.413	1.3657					27	11	3	0	0	0	0.38174	1	28921	28921		34.402	15.145	1	2447100			35512	2946	17542	17619	41460	41460					0.022065924119033298
TYIPGTQITF	10	Unmodified	_TYIPGTQITF_					0	0	0		ENSG00000141027|ENST00000268712|NCOR1;nc|ENSG00000141027|O75376-2|NCOR1;ENST00000470782.5_1_17:15935612-15971511:-|nuORF	ENSG00000141027|ENST00000268712|NCOR1	ENSG00000141027|ENST00000268712|NCOR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8013183474541	2	570.800414	1139.58628	2.0962	0.0011965	2.7778	0.0015856	4.874	0.0027821	570.7995689800705	68.316	0.38352	70.186	69.979	70.363	1.87					28	11	3	0	0	0	0.38174	1	28684	28684		34.402	15.145	1	2209400			35513	2946	17542	17619	41461	41461					0.022065924119033298
TYIPVPAKI	9	Unmodified	_TYIPVPAKI_					0	0	0		ENSG00000008513|ENST00000522652|ST3GAL1	ENSG00000008513|ENST00000522652|ST3GAL1	ENSG00000008513|ENST00000522652|ST3GAL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.3053771853447	2	501.305136	1000.59572	1.7814	0.00089304	-0.41749	-0.00020929	1.3639	0.00068375	501.30478755326806	46.408	0.4644	47.783	47.555	48.019	1.3751					41	14	4	0	0	0	0.098163	2	19430	19383;19430		49.933	24.534	1	12004000			35514	531	17543	17620	41462;41463	41463					0.09544405488077246
TYIPVPAKI	9	Unmodified	_TYIPVPAKI_					0	0	0		ENSG00000008513|ENST00000522652|ST3GAL1	ENSG00000008513|ENST00000522652|ST3GAL1	ENSG00000008513|ENST00000522652|ST3GAL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.3053771853447	2	501.305136	1000.59572	0.98467	0.00049362	0.29519	0.00014798	1.2799	0.0006416	501.3051004798958	45.978	0.39857	47.948	47.727	48.126	1.9703					38	12	4	0	0	0	0.098163	2	19280	19230;19280		49.933	20.851	1	10624000			35515	531	17543	17620	41464;41465	41465					0.09544405488077246
TYIQDAFQL	9	Unmodified	_TYIQDAFQL_					0	0	0		ENST00000508737.1_1_4:38930819-38945175:+|nuORF;KLF3-FAM114A1|1|fusion;nc|ENSG00000197712|Q8IWE2-2|FAM114A1;ENSG00000197712|ENST00000358869|FAM114A1	ENST00000508737.1_1_4:38930819-38945175:+|nuORF	ENST00000508737.1_1_4:38930819-38945175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7764160037041	2	549.776939	1097.53933	1.7642	0.00096993	-2.2813	-0.0012542	-0.51708	-0.00028428	549.7755210757126	67.878	0.38785	69.256	69.007	69.394	1.3778					20	12	2	0	0	0	0.42305	1	28491	28491		19.257	4.4187	1	2486500			35516	5022	17544	17621	41466	41466					-0.005542671392504417
TYIQILESF	9	Unmodified	_TYIQILESF_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM;FANCM|p.V586Lfs*80|1|0.98|ENSG00000187790|chr14:45164533-45164545|GTTATTATCCTTT/-|frameshift_variant;nc|ENSG00000187790|Q8IYD8-2|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2980834841728	2	557.294965	1112.57538	4.4568	0.0024838	1.9433	0.001083	6.4002	0.0035668	557.2956990575245	87.414	0.52394	88.506	88.21	88.734	1.0918					38	16	3	0	0	0	0.018723	3	36907	36805;36858;36907		100.37	41.414	1	10269000			35517	4840	17545	17622	41467;41468;41469	41469					0.023591900376231933
TYIQILESF	9	Unmodified	_TYIQILESF_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM;FANCM|p.V586Lfs*80|1|0.98|ENSG00000187790|chr14:45164533-45164545|GTTATTATCCTTT/-|frameshift_variant;nc|ENSG00000187790|Q8IYD8-2|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2973510622978	2	557.294965	1112.57538	4.5867	0.0025561	1.193	0.00066484	5.7796	0.003221	557.2951842990617	86.917	0.52276	88.412	88.18	88.703	1.4953					43	16	4	0	0	0	0.023786	3	36672	36620;36672;36717		96.285	41.656	1	7850400			35518	4840	17545	17622	41470;41471;41472	41471					0.023591900376231933
TYIQKIFRM	9	Unmodified	_TYIQKIFRM_					0	0	0		ENST00000510365.5_1_4:8376552-8417570:-|nuORF;nc|ENSG00000087008|O15254-2|ACOX3;ENSG00000087008|ENST00000356406|ACOX3	ENST00000510365.5_1_4:8376552-8417570:-|nuORF	ENST00000510365.5_1_4:8376552-8417570:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.3367187380791	2	600.333901	1198.65325	2.4695	0.0014826	0.33435	0.00020072	2.8039	0.0016833	600.3348160988126	44.373	0.38614	45.739	45.513	45.9	1.3653					28	11	3	0	0	0	0.031145	1	18591	18591		85.642	45.684	1	2341900			35519	1080	17546	17623	41473	41473					0.06186924421990625
TYIQKIFRM	9	Unmodified	_TYIQKIFRM_					0	0	0		ENST00000510365.5_1_4:8376552-8417570:-|nuORF;nc|ENSG00000087008|O15254-2|ACOX3;ENSG00000087008|ENST00000356406|ACOX3	ENST00000510365.5_1_4:8376552-8417570:-|nuORF	ENST00000510365.5_1_4:8376552-8417570:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3354369997978	2	600.333901	1198.65325	2.1857	0.0013122	-1.827	-0.0010968	0.35874	0.00021536	600.3340857687579	43.72	0.55673	45.664	45.368	45.925	1.9438					37	17	4	0	0	0	0.086433	2	18347	18299;18347		53.833	24.155	1	2250500			35520	1080	17546	17623	41474;41475	41475					0.06186924421990625
TYIQNFRFF	9	Unmodified	_TYIQNFRFF_					0	0	0		INPP5B-TRIT1|1|fusion;nc|ENSG00000204084|P32019-3|INPP5B;nc|ENSG00000204084|P32019-4|INPP5B;ENSG00000204084|ENST00000373024|INPP5B;nc|ENSG00000204084|P32019|INPP5B	INPP5B-TRIT1|1|fusion	INPP5B-TRIT1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3152343630791	2	618.314023	1234.61349	1.5751	0.00097391	0.079704	4.9282E-05	1.6548	0.0010232	618.8151318192291	67.4	0.31124	68.778	68.603	68.914	1.3778					23	9	3	0	0	0	0.073578	1	28272	28272		58.679	22.552	1	1231200			35521	5122	17547	17624	41476	41476					0.005571207429284186
TYIQNFRFF	9	Unmodified	_TYIQNFRFF_					0	0	0		INPP5B-TRIT1|1|fusion;nc|ENSG00000204084|P32019-3|INPP5B;nc|ENSG00000204084|P32019-4|INPP5B;ENSG00000204084|ENST00000373024|INPP5B;nc|ENSG00000204084|P32019|INPP5B	INPP5B-TRIT1|1|fusion	INPP5B-TRIT1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3146850466728	2	618.314023	1234.61349	1.0767	0.00066572	-0.72964	-0.00045115	0.34704	0.00021458	618.3134058960042	66.91	0.27582	68.799	68.616	68.892	1.8889					14	8	2	0	0	0	0.073578	1	28063	28063		58.679	22.552	1	916170			35522	5122	17547	17624	41477	41477					0.005571207429284186
TYIRLYGRKF	10	Unmodified	_TYIRLYGRKF_					0	0	0		ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.9751464724541	4	329.942299	1315.74009	-0.13207	-4.3576E-05	-2.1292	-0.00070251	-2.2613	-0.00074609	330.1917156527809	27.097	0.54	28.368	28.295	28.835	1.2715					26	17	2	0	0	0	0.12547	1	11386	11386		1.9064	0	1	465700			35523	837	17548	17625	41478	41478					0.09485046968052302
TYIRWQELL	9	Unmodified	_TYIRWQELL_					0	0	0		ENSG00000168754|ENST00000490605|FAM178B;nc|ENSG00000168754|Q8IXR5-2|FAM178B;nc|ENSG00000168754|Q8IXR5-4|FAM178B;ENST00000494172.1_1_2:97543530-97560824:-|nuORF	ENSG00000168754|ENST00000490605|FAM178B	ENSG00000168754|ENST00000490605|FAM178B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3368408083916	2	611.334956	1220.65536	1.5991	0.0009776	0.65881	0.00040275	2.2579	0.0013804	611.3353526987113	67.585	0.28064	69.455	69.268	69.549	1.87					21	8	3	0	0	0	0.24056	1	28334	28334		28.495	4.4739	1	1075700			35524	4050	17549	17626	41479	41479					0.05385676431478714
TYIRWQELL	9	Unmodified	_TYIRWQELL_					0	0	0		ENSG00000168754|ENST00000490605|FAM178B;nc|ENSG00000168754|Q8IXR5-2|FAM178B;nc|ENSG00000168754|Q8IXR5-4|FAM178B;ENST00000494172.1_1_2:97543530-97560824:-|nuORF	ENSG00000168754|ENST00000490605|FAM178B	ENSG00000168754|ENST00000490605|FAM178B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	611.334956	1220.65536	2.0379	0.0012458	2.3891	0.0014605	4.427	0.0027064	611.3360313247778	68.19	0.40285	69.568	69.334	69.737	1.3778	0.056561	0.001345	NaN	28.495	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1505100			35525	4050	17549	17626							0.05385676431478714
TYISTIGIDF	10	Unmodified	_TYISTIGIDF_					0	0	0		ENST00000462680.5_1_1:153955993-153958658:-|nuORF;ENSG00000143545|ENST00000368575|RAB13	ENST00000462680.5_1_1:153955993-153958658:-|nuORF	ENST00000462680.5_1_1:153955993-153958658:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.2686645388603	2	565.292422	1128.57029	2.633	0.0014884	3.9602	0.0022387	6.5933	0.0037271	565.7962247949722	76.936	0.21813	78.23	78.076	78.294	1.2938					10	6	2	0	0	0	0.12461	1	32315	32315		14.838	3.198	1	408770			35526	3040	17550	17627	41480	41480					0.01114886174991625
TYISTIGIDF	10	Unmodified	_TYISTIGIDF_					0	0	0		ENST00000462680.5_1_1:153955993-153958658:-|nuORF;ENSG00000143545|ENST00000368575|RAB13	ENST00000462680.5_1_1:153955993-153958658:-|nuORF	ENST00000462680.5_1_1:153955993-153958658:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	565.292422	1128.57029	2.6943	0.0015231	5.3026	0.0029975	7.997	0.0045206	565.2961946621299	76.472	0.15974	78.239	78.095	78.255	1.7672	0.0044989	0.0011294	NaN	14.838	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	762240			35527	3040	17550	17627							0.01114886174991625
TYISWKEEL	9	Unmodified	_TYISWKEEL_					0	0	0		nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.7989990115166	2	584.797872	1167.58119	2.2498	0.0013157	0.22501	0.00013159	2.4748	0.0014473	584.7980008403648	47.263	0.51215	48.646	48.41	48.922	1.3825					40	15	4	0	0	0	0.010585	3	19780	19738;19780;19819		106.94	38.859	1	12060000			35528	2390	17551	17628	41481;41482;41483	41482					0.004102885493011854
TYISWKEEL	9	Unmodified	_TYISWKEEL_					0	0	0		nc|ENSG00000129003|Q709C8-4|VPS13C;nc|ENSG00000129003|Q709C8-2|VPS13C;nc|ENSG00000129003|Q709C8-3|VPS13C;ENSG00000129003|ENST00000644861|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	nc|ENSG00000129003|Q709C8-4|VPS13C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.7989990115166	2	584.797872	1167.58119	1.9731	0.0011539	-0.039188	-2.2917E-05	1.9339	0.001131	584.797878431911	46.784	0.49681	48.76	48.535	49.031	1.976					43	15	4	0	0	0	0.019486	3	19588	19545;19588;19638		99.755	69.119	1	11070000			35529	2390	17551	17628	41484;41485;41486	41485					0.004102885493011854
TYKDYVDLF	9	Unmodified	_TYKDYVDLF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.2844116091728	2	582.284597	1162.55464	0.41189	0.00023983	-0.5552	-0.00032329	-0.14332	-8.3451E-05	582.2845184152087	57.468	0.54417	58.883	58.521	59.065	1.4145					52	26	3	0	0	0	0.036104	2	24120	24074;24120		79.596	33.575	1	25295000			35530	5388	17552	17629	41487;41488	41488					-0.02013400342048044
TYKDYVDLF	9	Unmodified	_TYKDYVDLF_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2836791872978	2	582.284597	1162.55464	0.67239	0.00039152	-1.0233	-0.00059583	-0.35088	-0.00020431	582.2842771956944	56.892	0.56311	58.86	58.487	59.05	1.9684					42	19	3	0	0	0	0.02878	3	23918	23829;23867;23918		89.401	47.561	1	31991000			35531	5388	17552	17629	41489;41490;41491	41491					-0.02013400342048044
TYKNFFYLI	9	Unmodified	_TYKNFFYLI_					0	0	0		PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant;ENSG00000011405|ENST00000691414|PIK3C2A	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.8243286013603	2	604.82115	1207.62775	2.7657	0.0016728	2.9242	0.0017686	5.6899	0.0034414	604.8210269888751	75.173	0.74137	76.479	76.214	76.956	1.3063					70	23	5	0	0	0	0.033102	2	31494	31494;31540		82.529	42.58	1	37704000			35532	570	17553	17630	41492;41493	41492					0.032237731712484674
TYKNFFYLI	9	Unmodified	_TYKNFFYLI_					0	0	0		PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant;ENSG00000011405|ENST00000691414|PIK3C2A	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	PIK3C2A|p.F1330Sfs*13|1|0.04|ENSG00000011405|chr11:17101297-17101298|-/TAACATTTTAGAAAGAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.8229247927666	2	604.82115	1207.62775	2.8755	0.0017392	2.8977	0.0017526	5.7733	0.0034918	604.8211005867116	74.715	0.68886	76.497	76.195	76.884	1.7817					62	21	5	0	0	0	0.015029	2	31281	31281;31328		103.35	40.781	1	29947000			35533	570	17553	17630	41494;41495	41494					0.032237731712484674
TYLAGVSYQI	10	Unmodified	_TYLAGVSYQI_					0	0	0			REV__ENSG00000132004|ENST00000393261|FBXW9	REV__ENSG00000132004|ENST00000393261|FBXW9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8004638552666	2	557.792589	1113.57063	1.9052	0.0010627	-0.70586	-0.00039373	1.1994	0.000669	557.7925889485159	56.903	0.4586	58.318	58.093	58.551	1.4145					25	14	3	0	0	0	0.52861	1	23908	23908		26.268	2.2476	1	11521000	+		35534	9836	17554	17631	41496	41496					0.01838305894852965
TYLDIFRDF	9	Unmodified	_TYLDIFRDF_					0	0	0		ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2994262576103	2	595.298039	1188.58152	3.076	0.0018311	-0.78991	-0.00047023	2.2861	0.0013609	595.2978077088361	81.035	0.49179	82.269	82.041	82.533	1.2332					42	15	4	0	0	0	0.00032631	4	34022	33975;34022;34067;34123		136.39	63.424	1	11514000			35535	891	17555	17632	41497;41498;41499;41500	41498					-0.005222917308628894
TYLDIFRDF	9	Unmodified	_TYLDIFRDF_					0	0	0		ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	ENSG00000072818|ENST00000158762|ACAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2988769412041	2	595.298039	1188.58152	1.9356	0.0011523	-0.097525	-5.8056E-05	1.8381	0.0010942	595.2980424844648	80.592	0.58023	82.287	82.029	82.61	1.6959					55	18	4	0	0	0	4.1713E-05	3	33814	33766;33814;33868		155.95	82.986	1	8823500			35536	891	17555	17632	41501;41502;41503	41502					-0.005222917308628894
TYLDNGVVF	9	Unmodified	_TYLDNGVVF_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2608520388603	2	514.258382	1026.50221	3.286	0.0016899	-0.76838	-0.00039514	2.5177	0.0012947	514.2578029723511	60.445	0.40318	61.864	61.656	62.059	1.4196					26	12	3	0	0	0	0.16939	1	25359	25359		48.346	16.229	1	1944700			35537	4005	17556	17633	41504	41504					-0.009979386849863658
TYLDNGVVF	9	Unmodified	_TYLDNGVVF_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2614623904228	2	514.258382	1026.50221	3.3856	0.0017411	-0.66268	-0.00034079	2.7229	0.0014003	514.2578303928774	59.997	0.28287	61.966	61.794	62.077	1.969					17	8	3	0	0	0	0.16939	1	25160	25160		48.346	16.229	1	2050500			35538	4005	17556	17633	41505	41505					-0.009979386849863658
TYLEKAIKI	9	Unmodified	_TYLEKAIKI_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5552245974541	3	360.221742	1077.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.609	1	34.884	34.384	35.384	1.2746								0	0	0	0.10133	1	14100	14100		34.222	1.3239	1				35539	4829	17557	17634	41506	41506					0.10768059688280118
TYLEKAIKI	9	Unmodified	_TYLEKAIKI_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8300659060478	2	539.828975	1077.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.674	1	34.949	34.449	35.449	1.2746								0	0	0	0.0025993	1	14128	14128		96.936	2.9974	1				35540	4829	17557	17634	41507	41507					0.10768059688280118
TYLEKAIKI	9	Unmodified	_TYLEKAIKI_					0	0	0		ENST00000565455.5_1_16:8987857-9023250:-|nuORF;nc|ENSG00000187555|Q93009-3|USP7;ENSG00000187555|ENST00000344836|USP7	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	ENST00000565455.5_1_16:8987857-9023250:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2219116091728	3	360.221742	1077.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.14	1	34.965	34.465	35.465	1.8246								0	0	0	0.060473	1	13893	13893		42.312	1.5876	1				35541	4829	17557	17634	41508	41508					0.10768059688280118
TYLEKFQNL	9	Unmodified	_TYLEKFQNL_					0	0	0		ENST00000572632.1_1_16:3569992-3580585:+|nuORF;nc|ENSG00000103351|Q96AJ1-2|CLUAP1;ENSG00000103351|ENST00000576634|CLUAP1	ENST00000572632.1_1_16:3569992-3580585:+|nuORF	ENST00000572632.1_1_16:3569992-3580585:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.3070556521416	2	578.305864	1154.59717	2.0116	0.0011633	-0.49928	-0.00028874	1.5123	0.00087457	578.8072520050906	43.885	0.27641	45.239	45.1	45.377	1.3536					19	8	3	0	0	0	0.045797	1	18394	18394		71.134	18.865	1	1449600			35542	1429	17558	17635	41509	41509					0.026059947862222543
TYLEKFQNL	9	Unmodified	_TYLEKFQNL_					0	0	0		ENST00000572632.1_1_16:3569992-3580585:+|nuORF;nc|ENSG00000103351|Q96AJ1-2|CLUAP1;ENSG00000103351|ENST00000576634|CLUAP1	ENST00000572632.1_1_16:3569992-3580585:+|nuORF	ENST00000572632.1_1_16:3569992-3580585:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.3065063357353	2	578.305864	1154.59717	1.9805	0.0011454	0.19045	0.00011014	2.171	0.0012555	578.3047252475791	43.249	0.21259	45.193	45.072	45.285	1.9438					15	6	3	0	0	0	0.091139	1	18120	18120		52.268	16.141	1	1263000			35543	1429	17558	17635	41510	41510					0.026059947862222543
TYLKAVKLF	9	Unmodified	_TYLKAVKLF_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8353149294853	2	541.83406	1081.65357	2.3403	0.0012681	0.97764	0.00052972	3.3179	0.0017978	541.8343956821012	44.227	0.3824	45.58	45.377	45.759	1.3536					33	11	4	0	0	0	0.031145	3	18532	18495;18532;18571		85.642	41.783	1	7075300			35544	2722	17559	17636	41511;41512;41513	41512					0.11600667413495103
TYLKAVKLF	9	Unmodified	_TYLKAVKLF_					0	0	0		ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	ENSG00000136381|ENST00000258886|IREB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.8348876833916	2	541.83406	1081.65357	2.1314	0.0011548	-0.11014	-5.9676E-05	2.0212	0.0010952	541.8339845645769	43.528	0.41658	45.472	45.285	45.701	1.9438					35	13	4	0	0	0	0.040497	3	18268	18177;18225;18268		75.761	39.634	1	5786300			35545	2722	17559	17636	41514;41515;41516	41516					0.11600667413495103
TYLKEYPN	8	Unmodified	_TYLKEYPN_					0	0	0			REV__tr|A0A553SML2|A0A553SML2_NIACIFAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22660PE=4SV=1	REV__tr|A0A553SML2|A0A553SML2_NIACIFAD-dependentoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22660PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	342.7813598513603	3	343.17468	1026.50221	-1.3896	-0.00047689	-4.1409	-0.001421	-5.5305	-0.0018979	343.5058077049704	79.686	0.55913	79.686	79.267	79.826	0					26	17	2	0	0	0	2.3239	1	33036	33036		2.9952	1.5133	1	575790	+		35546	15025	17560	17637	41517	41517					-0.009979386850091032
TYLNDFFSY	9	Unmodified	_TYLNDFFSY_					0	0	0		ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1169.515917956829	1	1169.51497	1168.50769	2.0661	0.0024163	0.56432	0.00065998	2.6304	0.0030763	1169.5156362641778	77.726	0.25196	79.007	78.856	79.108	1.2809					13	7	2	0	0	0	0.10993	1	32598	32598		46.021	25.567	1	1571500			35547	2373	17561	17638	41518	41518					-0.06982259893175069
TYLNDFFSY	9	Unmodified	_TYLNDFFSY_					0	0	0		ENSG00000128585|ENST00000352689|MKLN1;ENST00000494785.5_1_7:131012658-131163543:+|nuORF;nc|ENSG00000128585|Q9UL63-2|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	ENSG00000128585|ENST00000352689|MKLN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1169.515795886517	1	1169.51497	1168.50769	0.9233	0.0010798	1.286	0.001504	2.2093	0.0025839	1169.517131840128	77.273	0.28651	79.025	78.818	79.105	1.7514					13	8	2	0	0	0	0.073578	1	32400	32400		58.679	38.225	1	1626000			35548	2373	17561	17638	41519	41519					-0.06982259893175069
TYLPAGQSVLL	11	Unmodified	_TYLPAGQSVLL_					0	0	0		ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	ENSG00000167085|ENST00000300408|PHB1	ENSG00000167085|ENST00000300408|PHB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3307372927666	2	581.329339	1160.64412	3.005	0.0017469	0.16182	9.4072E-05	3.1668	0.0018409	581.3293935821209	64.902	0.46922	66.3	66.039	66.508	1.3989					34	14	3	0	0	0	0.083956	2	27224	27174;27224		59.368	13.669	1	4058700			35549	3946	17562	17639	41520;41521	41521					0.07022854337355966
TYLPAGQSVLL	11	Unmodified	_TYLPAGQSVLL_					0	0	0		ENSG00000167085|ENST00000300408|PHB1;nc|ENSG00000167085|P35232-2|PHB1	ENSG00000167085|ENST00000300408|PHB1	ENSG00000167085|ENST00000300408|PHB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3313476443291	2	581.329339	1160.64412	2.3002	0.0013372	0.6771	0.00039362	2.9773	0.0017308	581.3295564638503	64.361	0.59902	66.289	65.919	66.518	1.928					38	18	3	0	0	0	0.11322	2	27016	26969;27016		53.404	15.228	1	4000700			35550	3946	17562	17639	41522;41523	41523					0.07022854337355966
TYLPAPEGLKF	11	Unmodified	_TYLPAPEGLKF_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3383056521416	2	618.337164	1234.65977	2.2041	0.0013629	1.1784	0.00072865	3.3825	0.0020915	618.3374382876382	59.213	0.48567	60.633	60.409	60.895	1.4196					37	15	3	0	0	0	0.029255	2	24845	24801;24845		80.676	50.039	1	6102800			35551	663	17563	17640	41524;41525	41525					0.05183140854364865
TYLPAPEGLKF	11	Unmodified	_TYLPAPEGLKF_					0	0	0		TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant;nc|ENSG00000041982|P24821-6|TNC;nc|ENSG00000041982|P24821-5|TNC;nc|ENSG00000041982|P24821-2|TNC;nc|ENSG00000041982|P24821-3|TNC;nc|ENSG00000041982|P24821-4|TNC;ENSG00000041982|ENST00000350763|TNC	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	TNC|p.D866Gfs*3|1|0.06|ENSG00000041982|chr9:115078020-115078021|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3396484255791	2	618.337164	1234.65977	1.9688	0.0012174	1.2134	0.00075026	3.1822	0.0019676	618.3375578880168	58.769	0.39287	60.738	60.516	60.908	1.969					32	12	3	0	0	0	0.12432	2	24694	24642;24694		51.415	25.985	1	5133500			35552	663	17563	17640	41526;41527	41527					0.05183140854364865
TYLPREILNLI	11	Unmodified	_TYLPREILNLI_					0	0	0		ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.8994018435478	2	672.89792	1343.78129	1.9504	0.0013124	1.5583	0.0010486	3.5088	0.002361	672.8990288818022	84.892	0.39811	86.051	85.905	86.303	1.159					29	12	3	0	0	0	0.085421	1	35599	35599		59.052	31.829	1	3296700			35553	3678	17564	17641	41528	41528					0.12314763216909341
TYLPREILNLI	11	Unmodified	_TYLPREILNLI_					0	0	0		ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	ENSG00000163428|ENST00000295628|LRRC58	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	672.9005004763603	2	672.89792	1343.78129	2.0301	0.0013661	1.7129	0.0011526	3.743	0.0025187	672.8992158668336	84.391	0.35841	85.987	85.829	86.188	1.5962					29	11	3	0	0	0	0.03922	2	35378	35378;35426		70.929	33.854	1	2748500			35554	3678	17564	17641	41529;41530	41529					0.12314763216909341
TYLPTNASLSF	11	Unmodified	_TYLPTNASLSF_					0	0	0		ERBB2|p.K336Sfs*18|1|0.05|ENSG00000141736|chr17:39712032-39712032|A/-|frameshift_variant;ENST00000584908.5_1_17:37856482-37868536:+|nuORF;ERBB2-MUC1|2|fusion;ERBB2-MUC1|1|fusion;nc|ENSG00000141736|P04626-6|ERBB2;nc|ENSG00000141736|P04626-5|ERBB2;nc|ENSG00000141736|P04626-4|ERBB2;ENSG00000141736|ENST00000269571|ERBB2	ERBB2|p.K336Sfs*18|1|0.05|ENSG00000141736|chr17:39712032-39712032|A/-|frameshift_variant	ERBB2|p.K336Sfs*18|1|0.05|ENSG00000141736|chr17:39712032-39712032|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.3088867068291	2	607.308603	1212.60265	1.8585	0.0011287	0.35675	0.00021666	2.2152	0.0013453	607.3087004410509	64.858	0.21703	66.786	66.647	66.864	1.928					9	6	2	0	0	0	0.43089	1	27217	27217		26.021	6.6588	1	1090200			35555	2974	17565	17642	41531	41531					0.004856735779867449
TYLPTSPLL	9	Unmodified	_TYLPTSPLL_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1004.568774402142	1	1004.56627	1003.559	2.5541	0.0025657	0.43107	0.00043303	2.9851	0.0029988	1004.5662898887425	68.436	0.39733	69.814	69.675	70.072	1.3778					36	12	4	0	0	0	0.00090036	3	28735	28685;28735;28787		133.7	50.255	1	13316000			35556	978	17566	17643	41532;41533;41534	41533					0.057361088715197184
TYLPTSPLL	9	Unmodified	_TYLPTSPLL_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7892028689384	2	502.786776	1003.559	2.3646	0.0011889	0.37181	0.00018694	2.7364	0.0013758	502.78692722551256	68.467	0.42715	69.845	69.645	70.072	1.3778					41	13	4	0	0	0	0.0037165	3	28699	28699;28747;28802		125.62	32.802	1	17850000			35557	978	17566	17643	41535;41536;41537	41535					0.057361088715197184
TYLPTSPLL	9	Unmodified	_TYLPTSPLL_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1004.569140613079	1	1004.56627	1003.559	2.4381	0.0024492	0.10185	0.00010232	2.5399	0.0025515	1004.5660945615574	67.941	0.39941	69.811	69.611	70.01	1.87					36	12	4	0	0	0	0.00025648	4	28507	28440;28462;28507;28549		139.54	42.469	1	12475000			35558	978	17566	17643	41538;41539;41540;41541	41540					0.057361088715197184
TYLPTSPLL	9	Unmodified	_TYLPTSPLL_					0	0	0		ENSG00000078618|ENST00000352171|NRDC;nc|ENSG00000078618|O43847-2|NRDC	ENSG00000078618|ENST00000352171|NRDC	ENSG00000078618|ENST00000352171|NRDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7879211306572	2	502.786776	1003.559	1.992	0.0010016	0.61473	0.00030908	2.6067	0.0013106	502.78711031695656	67.973	0.49327	69.843	69.58	70.073	1.87					45	15	4	0	0	0	0.0075027	3	28560	28460;28508;28560		112.59	30.98	1	9134600			35559	978	17566	17643	41542;41543;41544	41544					0.057361088715197184
TYLQMKWPL	9	Oxidation (M)	_TYLQM(Oxidation (M))KWPL_		TYLQM(1)KWPL		TYLQM(46)KWPL	0	0	1		ENSG00000152284|ENST00000282111|TCF7L1;TCF7L2-VTI1A|1|fusion;TCF7L2-VTI1A|3|fusion;TCF7L2-VTI1A|4|fusion;TCF7L2-VTI1A|7|fusion;nc|ENSG00000148737|Q9NQB0-14|TCF7L2;nc|ENSG00000148737|Q9NQB0-15|TCF7L2;nc|ENSG00000148737|Q9NQB0-10|TCF7L2;nc|ENSG00000148737|Q9NQB0-12|TCF7L2;nc|ENSG00000148737|Q9NQB0-11|TCF7L2;nc|ENSG00000148737|Q9NQB0-13|TCF7L2;nc|ENSG00000148737|Q9NQB0-16|TCF7L2;nc|ENSG00000148737|Q9NQB0-8|TCF7L2	ENSG00000152284|ENST00000282111|TCF7L1	ENSG00000152284|ENST00000282111|TCF7L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3140136599541	2	598.312635	1194.61072	2.698	0.0016142	-1.3122	-0.00078513	1.3857	0.0008291	598.3118959345454	72.848	0.54012	74.659	74.448	74.988	1.8101					37	16	3	0	0	0	0.10993	1	30578	30578		46.021	9.5148	1	3098200			35560	3319	17567	17644	41545	41545		59			0.021195292937818522
TYLRDQHFL	9	Unmodified	_TYLRDQHFL_					0	0	0		chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1;chr19:29821817-29822240|415|28.89|0.48|5.91|+|ENST00000576532|CCNE1,CCNE1;nc|ENSG00000105173|P24864-2|CCNE1;nc|ENSG00000105173|P24864-3|CCNE1;ENSG00000105173|ENST00000262643|CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	chr19:29812776-29812978|402|19.78|0.44|5.5|+|ENST00000575243|CCNE1,CCNE1	MSMS	GG20161007_CRH_Patient100_W632_02	4	398.2082397341728	3	398.208495	1191.60366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.237	1	32.053	31.553	32.553	1.8151								0	0	0	0.42693	1	12677	12677		4.897	2.811	1				35561	229	17568	17645	41546	41546					0.015519327375614012
TYLRRAKQK	9	Unmodified	_TYLRRAKQK_					0	0	0		tr|A0A553STG6|A0A553STG6_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04960PE=3SV=1	tr|A0A553STG6|A0A553STG6_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04960PE=3SV=1	tr|A0A553STG6|A0A553STG6_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_04960PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	582.3543578982353	2	582.354014	1162.69348	2.2724	0.0013233	-0.55344	-0.0003223	1.7189	0.001001	582.3535400939439	90.486	0.58612	90.486	90.193	90.779	0					67	18	5	0	0	0	0.8523	1	37845	37845		0.52476	0	1	57051000			35562	16650	17569	17646	41547	41547					0.1186360713677459
TYLSIIHSL	9	Unmodified	_TYLSIIHSL_					0	0	0		ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	ENSG00000133030|ENST00000651222|MPRIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7995483279228	2	523.797675	1045.5808	2.9501	0.0015452	0.80651	0.00042245	3.7566	0.0019677	523.797769365598	62.091	0.31871	63.508	63.333	63.652	1.4177					21	9	3	0	0	0	0.026628	2	26023	26023;26084		92.822	18.399	1	1756200			35563	2556	17570	17647	41548;41549	41548					0.05982913620096042
TYLVDMQRF	9	Unmodified	_TYLVDMQRF_					0	0	0		ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.7929565310478	2	586.792066	1171.56958	1.9559	0.0011477	0.72157	0.00042341	2.6774	0.0015711	586.79208898176	50.607	0.5756	52	51.74	52.316	1.3938					38	18	4	0	0	0	0.010279	2	21183	21140;21183		107.19	58.841	1	11459000			35564	4545	17571	17648	41550;41551	41551					-0.00934231745713987
TYLVDMQRF	9	Unmodified	_TYLVDMQRF_					0	0	0		ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	ENSG00000180340|ENST00000315323|FZD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.7934448122978	2	586.792066	1171.56958	1.6161	0.00094834	1.1944	0.00070086	2.8105	0.0016492	586.792524769298	50.045	0.33918	52.023	51.819	52.159	1.9772					31	10	4	0	0	0	0.031145	2	20963	20915;20963		85.642	45.684	1	10487000			35565	4545	17571	17648	41552;41553	41553					-0.00934231745713987
TYLYYHVH	8	Unmodified	_TYLYYHVH_					0	0	0			REV__ENST00000570049.5_1_16:67335149-67360610:-|nuORF	REV__ENST00000570049.5_1_16:67335149-67360610:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	547.7635375857353	2	548.266542	1094.51853	0.3317	0.00018186	-4.3854	-0.0024044	-4.0537	-0.0022225	548.263749342982	16.165	0.37483	16.165	15.902	16.277	0					16	11	2	0	0	0	2.3239	1	6632	6632		2.8892	0	1	711610	+		35566	10920	17572	17649	41554	41554					-0.024948127282414134
TYMDRVFKQF	10	Unmodified	_TYMDRVFKQF_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	445.5579711794853	3	445.556907	1333.64889	2.2989	0.0010243	-0.12716	-5.6655E-05	2.1717	0.00096764	445.55694086501495	46.934	0.83158	48.316	48.058	48.89	1.3825					70	25	4	0	0	0	0.22041	2	19665	19625;19665		46.475	30.937	1	8076000			35567	3493	17573	17650	41555;41556	41556					-0.004585847915677732
TYMDRVFKQF	10	Unmodified	_TYMDRVFKQF_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	667.8349487185478	2	667.831723	1333.64889	1.8534	0.0012377	0.87399	0.00058368	2.7273	0.0018214	667.8324240613539	46.92	0.35047	48.302	48.122	48.473	1.3825					26	10	3	0	0	0	0.13668	2	19634	19634;19683		64.927	44.512	1	2255800			35568	3493	17573	17650	41557;41558	41557					-0.004585847915677732
TYMDRVFKQF	10	Unmodified	_TYMDRVFKQF_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.8328124880791	2	667.831723	1333.64889	1.4314	0.00095595	0.33518	0.00022385	1.7666	0.0011798	667.8320903864172	46.45	0.36795	48.421	48.219	48.587	1.9703					27	11	3	0	0	0	0.1864	2	19477	19428;19477		64.927	44.512	1	2199200			35569	3493	17573	17650	41559;41560	41560					-0.004585847915677732
TYMDRVFKQF	10	Unmodified	_TYMDRVFKQF_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	445.5580322146416	3	445.556907	1333.64889	1.8389	0.00081933	0.1222	5.4447E-05	1.9611	0.00087378	445.55706110973546	46.455	0.80538	48.425	48.188	48.993	1.9703					70	25	5	0	0	0	0.1634	2	19475	19437;19475		53.47	38.512	1	11206000			35570	3493	17573	17650	41561;41562	41562					-0.004585847915677732
TYMGHTGAVW	10	Unmodified	_TYMGHTGAVW_					0	0	0		ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.7560912966728	2	561.755484	1121.49641	0.65733	0.00036926	-2.4352	-0.001368	-1.7779	-0.00099876	561.7545776802699	32.231	0.25923	33.509	33.411	33.67	1.2782					16	8	3	0	0	0	0.24174	1	13521	13521		43.858	25.723	1	751180			35571	1051	17574	17651	41563	41563					-0.059473604683034864
TYMGHTGAVW	10	Unmodified	_TYMGHTGAVW_					0	0	0		ENSG00000084623|ENST00000677711|EIF3I;ENST00000474371.1_1_1:32688150-32694122:+|nuORF;ENST00000489353.5_1_1:32688042-32691823:+|nuORF	ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	561.755484	1121.49641	0.84786	0.00047629	-1.8092	-0.0010163	-0.96137	-0.00054006	562.2556002289365	31.678	0.23525	33.502	33.358	33.594	1.8246	-0.0034796	0.00037499	NaN	43.858	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	901940			35572	1051	17574	17651							-0.059473604683034864
TYMKDLYQL	9	Unmodified	_TYMKDLYQL_					0	0	0		nc|ENSG00000146376|Q8N392-2|ARHGAP18;ENSG00000146376|ENST00000368149|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7959472537041	2	587.794275	1173.574	1.8868	0.001109	0.76953	0.00045233	2.6563	0.0015614	587.7947578053218	46.66	0.53302	48.035	47.773	48.306	1.3751					28	16	2	0	0	0	0.010585	3	19571	19533;19571;19615		106.94	35.018	1	13888000			35573	3149	17575	17652	41564;41565;41566	41565					-0.005847673228117856
TYMKDLYQL	9	Unmodified	_TYMKDLYQL_					0	0	0		nc|ENSG00000146376|Q8N392-2|ARHGAP18;ENSG00000146376|ENST00000368149|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	nc|ENSG00000146376|Q8N392-2|ARHGAP18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.7955810427666	2	587.794275	1173.574	1.3894	0.00081671	0.78113	0.00045914	2.1706	0.0012759	587.7948491240087	46.201	0.4976	48.172	47.912	48.41	1.9703					40	15	3	0	0	0	0.023685	3	19333	19333;19371;19414		96.367	42.534	1	12269000			35574	3149	17575	17652	41567;41568;41569	41567					-0.005847673228117856
TYMKEILRF	9	Unmodified	_TYMKEILRF_					0	0	0		SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant;ENSG00000119899|ENST00000355773|SLC17A5	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8303710818291	2	600.825909	1199.63727	1.8389	0.0011048	3.3125	0.0019903	5.1514	0.0030951	600.8284291405247	45.839	0.50176	47.214	47.023	47.524	1.3751					28	15	3	0	0	0	0.13623	2	19187	19187;19256		40.239	24.09	1	1438100			35575	2088	17576	17653	41570;41571	41570					0.04543218185108344
TYMKEILRF	9	Unmodified	_TYMKEILRF_					0	0	0		SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant;ENSG00000119899|ENST00000355773|SLC17A5	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	SLC17A5|p.T431Efs*3|1|0.03|ENSG00000119899|chr6:73600410-73600411|-/CATAGCTC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8285400271416	2	600.825909	1199.63727	1.6723	0.0010048	3.0775	0.001849	4.7498	0.0028538	600.8279294228777	45.32	0.59679	47.28	46.96	47.556	1.9596					32	18	3	0	0	0	0.22861	2	18972	18972;19028		29.841	16.798	1	1335100			35576	2088	17576	17653	41572;41573	41572					0.04543218185108344
TYMLRTNHW	9	Unmodified	_TYMLRTNHW_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	407.8675720095634	3	407.865964	1220.57606	2.3286	0.00094977	0.9823	0.00040065	3.3109	0.0013504	407.8662227725367	47.165	0.25124	49.141	48.999	49.25	1.976					9	7	2	0	0	0	0.81521	1	19763	19763		2.7352	0	1	1104600			35577	3767	17577	17654	41574	41574					-0.025402937942999415
TYMPHVHIL	9	Unmodified	_TYMPHVHIL_					0	0	0		ENSG00000145868|ENST00000340253|FBXO38;ENST00000508326.5_1_5:147774339-147782111:+|nuORF;nc|ENSG00000145868|Q6PIJ6-3|FBXO38;nc|ENSG00000145868|Q6PIJ6-2|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1013976931572	3	370.863672	1109.56919	1.1933	0.00044255	-1.0844	-0.00040215	0.10895	4.0404E-05	370.86337125601796	39.02	0.37539	40.316	40.132	40.507	1.2961					19	11	2	0	0	0	0.11799	1	16368	16368		2.9952	1.8019	1	3013800			35578	3127	17578	17655	41575	41575					0.018783933251143026
TYMPHVHIL	9	Unmodified	_TYMPHVHIL_					0	0	0		ENSG00000145868|ENST00000340253|FBXO38;ENST00000508326.5_1_5:147774339-147782111:+|nuORF;nc|ENSG00000145868|Q6PIJ6-3|FBXO38;nc|ENSG00000145868|Q6PIJ6-2|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	ENSG00000145868|ENST00000340253|FBXO38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1013366580009	3	370.863672	1109.56919	0.80647	0.00029909	-0.3499	-0.00012977	0.45658	0.00016933	370.86359311326356	38.462	0.37709	40.299	40.084	40.461	1.8366					26	11	3	0	0	0	0.11891	1	16156	16156		1.1933	0.735	1	1854400			35579	3127	17578	17655	41576	41576					0.018783933251143026
TYNKHINISF	10	Unmodified	_TYNKHINISF_					0	0	0		ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.8848754763603	3	412.8839	1235.62987	0.55464	0.000229	0.94778	0.00039132	1.5024	0.00062032	412.8843761568391	30.577	0.71891	31.859	31.626	32.345	1.2825					56	22	4	0	0	0	0.32544	2	12837	12788;12837		37.771	13.807	1	7094000			35580	4282	17579	17656	41577;41578	41578					0.02148201909017189
TYNKHINISF	10	Unmodified	_TYNKHINISF_					0	0	0		ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.8239623904228	2	618.822212	1235.62987	0.5013	0.00031021	1.6883	0.0010448	2.1896	0.001355	618.8228678508308	30.576	0.43357	31.858	31.687	32.121	1.2825					29	13	3	0	0	0	0.4673	2	12867	12811;12867		27.223	18.478	1	1849900			35581	4282	17579	17656	41579;41580	41580					0.02148201909017189
TYNKHINISF	10	Unmodified	_TYNKHINISF_					0	0	0		ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.8244506716728	2	618.822212	1235.62987	0.51124	0.00031636	2.0112	0.0012446	2.5225	0.001561	618.8233480085736	30.057	0.39952	31.872	31.676	32.075	1.8151					25	12	3	0	0	0	0.22752	2	12572	12572;12633		51.488	28.83	1	2160700			35582	4282	17579	17656	41581;41582	41581					0.02148201909017189
TYNKHINISF	10	Unmodified	_TYNKHINISF_					0	0	0		ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	ENSG00000173451|ENST00000308086|THAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.8843261599541	3	412.8839	1235.62987	0.75593	0.00031211	0.42261	0.00017449	1.1785	0.0004866	412.88407865658365	30.05	0.71242	31.865	31.676	32.388	1.8151					48	22	4	0	0	0	0.71237	2	12579	12579;12619		17.863	5.6356	1	7468400			35583	4282	17579	17656	41583;41584	41583					0.02148201909017189
TYNMVLNLL	9	Unmodified	_TYNMVLNLL_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.7932006716728	2	540.791535	1079.56852	3.693	0.0019971	-0.17401	-9.4103E-05	3.519	0.001903	540.791587983877	86.694	0.39895	87.786	87.554	87.953	1.0918					32	14	3	0	0	0	0.029061	2	36562	36500;36562		88.954	31.483	1	5741000			35584	656	17580	17657	41585;41586	41586					0.03191553885403664
TYNMVLNLL	9	Unmodified	_TYNMVLNLL_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.7919189333916	2	540.791535	1079.56852	4.0679	0.0021999	-1.9449	-0.0010518	2.123	0.0011481	540.790437923115	86.159	0.31905	87.706	87.61	87.929	1.547					24	11	3	0	0	0	0.033102	2	36290	36290;36356		82.529	30.261	1	3968100			35585	656	17580	17657	41587;41588	41587					0.03191553885403664
TYNYPVHYF	9	Unmodified	_TYNYPVHYF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.2782470583916	2	602.277106	1202.53966	2.2001	0.0013251	0.27363	0.0001648	2.4737	0.0014899	602.2765548141083	43.961	0.43348	45.315	45.132	45.565	1.3536					28	13	3	0	0	0	0.076627	2	18461	18411;18461		57.471	40.358	1	1506600			35586	1792	17581	17658	41589;41590	41590					-0.053508474193904476
TYNYPVHYF	9	Unmodified	_TYNYPVHYF_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.2765991091728	2	602.277106	1202.53966	2.0687	0.0012459	0.52261	0.00031476	2.5913	0.0015607	602.27707588275	43.364	0.44416	45.308	45.072	45.516	1.9438					30	14	3	0	0	0	0.11478	2	18135	18135;18184		44.407	34.333	1	1160900			35587	1792	17581	17658	41591;41592	41591					-0.053508474193904476
TYPKIWVKV	9	Unmodified	_TYPKIWVKV_					0	0	0		ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3419067263603	2	567.33951	1132.66447	2.3773	0.0013487	0.85185	0.00048329	3.2292	0.001832	567.3400374750878	40.002	0.83262	41.313	40.682	41.514	1.3102					67	27	4	0	0	0	0.043696	6	16746	16598;16645;16700;16746;16795;16838		72.968	54.822	1	9319200			35588	5353	17582	17659	41593;41594;41595;41596;41597;41598	41596					0.10344069787788612
TYPKIWVKV	9	Unmodified	_TYPKIWVKV_					0	0	0		ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.5624267458916	3	378.562099	1132.66447	1.5012	0.00056829	-0.56392	-0.00021348	0.93725	0.00035481	378.56230942025843	40.012	0.80041	41.322	40.746	41.547	1.3102					77	26	4	0	0	0	0.22154	3	16809	16724;16770;16809		23.79	18.006	1	10464000			35589	5353	17582	17659	41599;41600;41601	41601					0.10344069787788612
TYPKIWVKV	9	Unmodified	_TYPKIWVKV_					0	0	0		ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3416625857353	2	567.33951	1132.66447	1.6518	0.00093715	1.7873	0.001014	3.4392	0.0019512	567.3404758811923	39.615	0.93263	41.477	40.745	41.677	1.8624					76	29	4	0	0	0	0.043696	6	16537	16384;16436;16490;16537;16588;16638		72.968	54.822	1	5875300			35590	5353	17582	17659	41602;41603;41604;41605;41606;41607	41605					0.10344069787788612
TYPKIWVKV	9	Unmodified	_TYPKIWVKV_					0	0	0		ENSG00000243649|ENST00000425368|CFB;nc|ENSG00000243649|P00751-2|CFB	ENSG00000243649|ENST00000425368|CFB	ENSG00000243649|ENST00000425368|CFB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5625793337822	3	378.562099	1132.66447	1.3548	0.00051286	-0.46938	-0.00017769	0.88538	0.00033517	378.562207310817	39.547	0.99136	41.41	40.777	41.768	1.8624					86	31	4	0	0	0	0.15635	3	16598	16550;16598;16651		28.495	18.006	1	11300000			35591	5353	17582	17659	41608;41609;41610	41609					0.10344069787788612
TYPKLQQR	8	Unmodified	_TYPKLQQR_					0	0	0			REV__ENSG00000110243|ENST00000227665|APOA5	REV__ENSG00000110243|ENST00000227665|APOA5	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2921020388603	2	517.293091	1032.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.397	1	45.341	44.841	45.841	1.9438								0	0	0	1.0178	1	18196	18196		14.582	0	1		+		35592	9295	17583	17660	41611	41611					0.05664565054416926
TYPVLELSL	9	Unmodified	_TYPVLELSL_					0	0	0			REV__nc|ENSG00000243566|Q9BT76-2|UPK3B	REV__nc|ENSG00000243566|Q9BT76-2|UPK3B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.6262695193291	2	517.792058	1033.56956	2.0843	0.0010792	-0.89242	-0.00046209	1.1919	0.00061714	517.7927277696112	65.398	0.38096	65.724	65.548	65.929	0.32689					20	11	2	0	0	0	0.08828	1	27315	27315		15.847	0	1	1061800	+		35593	11932	17584	17661	41612	41612					0.054120915259545654
TYQDIFRDF	9	Unmodified	_TYQDIFRDF_					0	0	0		ENST00000472860.1_1_3:195000059-195000408:-|nuORF;ENSG00000114331|ENST00000326793|ACAP2	ENST00000472860.1_1_3:195000059-195000408:-|nuORF	ENST00000472860.1_1_3:195000059-195000408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.7867919802666	2	602.785296	1203.55604	2.8971	0.0017463	-0.86475	-0.00052126	2.0324	0.0012251	602.7849225079937	62.412	0.61069	63.829	63.524	64.135	1.4172					57	19	5	0	0	0	0.0039211	3	26144	26096;26144;26184		125.04	62.465	1	14181000			35594	1858	17585	17662	41613;41614;41615	41614					-0.037597662533016774
TYQDIFRDF	9	Unmodified	_TYQDIFRDF_					0	0	0		ENST00000472860.1_1_3:195000059-195000408:-|nuORF;ENSG00000114331|ENST00000326793|ACAP2	ENST00000472860.1_1_3:195000059-195000408:-|nuORF	ENST00000472860.1_1_3:195000059-195000408:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.7869140505791	2	602.785296	1203.55604	2.7406	0.001652	-0.90994	-0.0005485	1.8307	0.0011035	602.7849800901462	61.78	0.56428	63.737	63.497	64.061	1.9571					51	17	4	0	0	0	0.00032631	4	25922	25876;25922;25963;26021		136.39	64.47	1	13325000			35595	1858	17585	17662	41616;41617;41618;41619	41617					-0.037597662533016774
TYQEVAQKF	9	Unmodified	_TYQEVAQKF_					0	0	0		nc|ENSG00000093072|Q9NZK5-2|ADA2;ENSG00000093072|ENST00000399837|ADA2	nc|ENSG00000093072|Q9NZK5-2|ADA2	nc|ENSG00000093072|Q9NZK5-2|ADA2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.5857421755791	2	557.282389	1112.55022	1.3163	0.00073357	1.6576	0.00092374	2.9739	0.0016573	557.2833512689496	25.314	0.21215	26.573	26.468	26.68	1.2594					13	6	3	0	0	0	0.11568	1	10580	10580		10.824	2.2306	1	884610			35596	1173	17586	17663	41620	41620					-0.001548647649542545
TYQKKKEL	8	Unmodified	_TYQKKKEL_					0	0	0		ENSG00000151838|ENST00000537690|CCDC175	ENSG00000151838|ENST00000537690|CCDC175	ENSG00000151838|ENST00000537690|CCDC175	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1036.771411120892	1	1037.59897	1036.5917	1.262	0.0013095	3.4203	0.0035489	4.6823	0.0048584	1037.6030285855234	107.69	0.13486	107.69	107.58	107.72	0					15	6	3	0	0	0	2.3239	1	46219	46219		0.6015	0.076735	1	12508000			35597	3304	17587	17664	41621	41621					0.07486315994378856
TYQLRRDHFV	10	Unmodified	_TYQLRRDHFV_					0	0	0			REV__nc|ENSG00000135457|Q12800-2|TFCP2	REV__nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.8538085818291	2	667.851835	1333.68912	1.1878	0.00079327	0.82622	0.00055179	2.014	0.0013451	667.8524252885582	46.233	0.15522	48.204	48.095	48.251	1.9703					7	4	2	0	0	0	0.846	1	19381	19381		7.2892	1.0834	1	522910	+		35598	9425	17588	17665	41622	41622					0.03562097923213514
TYQLRRDHFV	10	Unmodified	_TYQLRRDHFV_					0	0	0			REV__nc|ENSG00000135457|Q12800-2|TFCP2	REV__nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	667.851835	1333.68912	1.6675	0.0011137	-0.52044	-0.00034757	1.1471	0.00076609	667.8513614251668	48.072	0.20307	48.402	48.259	48.462	0.33034	0.18182	-0.00023804	NaN	7.2892	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533940	+		35599	9425	17588	17665							0.03562097923213514
TYQLRRDHFV	10	Unmodified	_TYQLRRDHFV_					0	0	0			REV__nc|ENSG00000135457|Q12800-2|TFCP2	REV__nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	667.851835	1333.68912	1.6608	0.0011091	-1.4514	-0.0009693	0.2094	0.00013985	667.8517222455964	46.68	0.22148	48.055	47.893	48.115	1.3751	-0.1653	-0.0014815	NaN	7.2892	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508960	+		35600	9425	17588	17665							0.03562097923213514
TYQLRRDHFV	10	Unmodified	_TYQLRRDHFV_					0	0	0			REV__nc|ENSG00000135457|Q12800-2|TFCP2	REV__nc|ENSG00000135457|Q12800-2|TFCP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	667.851835	1333.68912	1.1878	0.00079327	0.82622	0.00055179	2.014	0.0013451	667.8524252885582	46.233	0.15522	48.204	48.095	48.251	1.9703	-0.016522	0.0015607	NaN	7.2892	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522910	+		35601	9425	17588	17665							0.03562097923213514
TYQRWQFTL	9	Unmodified	_TYQRWQFTL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.8184081912041	2	621.81693	1241.61931	1.5253	0.00094848	0.44658	0.00027769	1.9719	0.0012262	621.8171474872881	56.853	0.85086	58.267	57.816	58.667	1.4145					87	27	4	0	0	0	0.00015978	5	23777	23777;23827;23866;23907;23991		143.91	81.336	1	25547000			35602	4323	17589	17666	41623;41624;41625;41626;41627	41623					0.008162192546024016
TYQRWQFTL	9	Unmodified	_TYQRWQFTL_					0	0	0		PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant;ENSG00000174231|ENST00000304992|PRPF8;PRPF8|p.D1922Afs*17|1|0.05|ENSG00000174231|chr17:1656420-1656420|T/-|frameshift_variant;PRPF8|p.F1684Dfs*30|1|0.07|ENSG00000174231|chr17:1659445-1659446|-/AAGTCAGGAGATCGAGACCATC|frameshift_variant;PRPF8|p.Q1835Afs*4|1|0.07|ENSG00000174231|chr17:1658255-1658256|-/C|frameshift_variant;PRPF8|p.L371Dfs*10|1|0.04|ENSG00000174231|chr17:1679787-1679788|-/ATATATACTGCAATCCATC|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	PRPF8|p.Q2065Hfs*8|1|0.04|ENSG00000174231|chr17:1653809-1653810|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.8182861208916	2	621.81693	1241.61931	0.66502	0.00041352	0.66932	0.0004162	1.3343	0.00082972	621.8173238515279	56.288	0.73029	58.257	57.901	58.631	1.9684					67	23	4	0	0	0	4.1713E-05	5	23620	23524;23570;23620;23659;23704		155.95	91.993	1	28025000			35603	4323	17589	17666	41628;41629;41630;41631;41632	41630					0.008162192546024016
TYQTTLLHF	9	Unmodified	_TYQTTLLHF_					0	0	0		ENST00000562640.1_1_16:22010196-22010523:+|nuORF;nc|ENSG00000003147|Q05084-3|ICA1;ENSG00000003147|ENST00000402384|ICA1;nc|ENSG00000003147|Q05084-2|ICA1	ENST00000562640.1_1_16:22010196-22010523:+|nuORF	ENST00000562640.1_1_16:22010196-22010523:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	562.2921630740166	2	562.292756	1122.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.615	1	54.587	54.087	55.087	1.9722								0	0	0	0.026264	1	22042	22042		74.423	22.154	1				35604	464	17590	17667	41633	41633					0.014577256147049411
TYQVLAVTF	9	Unmodified	_TYQVLAVTF_					0	0	0		ENST00000474025.1_1_1:31744094-31762265:-|nuORF;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2856933474541	2	521.2844	1040.55425	2.8055	0.0014624	-0.012627	-6.5824E-06	2.7928	0.0014559	521.2843533115973	72.395	0.58094	73.725	73.423	74.004	1.3298					70	18	5	0	0	0	0.04812	4	30355	30307;30355;30397;30453		69.105	23.947	1	26812000			35605	746	17591	17668	41634;41635;41636;41637	41635					0.035592247287468126
TYQVLAVTF	9	Unmodified	_TYQVLAVTF_					0	0	0		ENST00000474025.1_1_1:31744094-31762265:-|nuORF;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1041.566455066204	1	1041.56152	1040.55425	2.2833	0.0023782	1.6884	0.0017586	3.9716	0.0041367	1041.5634139810757	72.387	0.39455	73.717	73.518	73.913	1.3297					28	12	3	0	0	0	0.093059	2	30338	30338;30385		51.63	20.993	1	3975500			35606	746	17591	17668	41638;41639	41638					0.035592247287468126
TYQVLAVTF	9	Unmodified	_TYQVLAVTF_					0	0	0		ENST00000474025.1_1_1:31744094-31762265:-|nuORF;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1041.568408191204	1	1041.56152	1040.55425	3.6737	0.0038263	0.12772	0.00013303	3.8014	0.0039594	1041.5612831087215	71.937	0.42493	73.761	73.57	73.995	1.824					26	13	3	0	0	0	0.093059	2	30136	30136;30189		51.63	20.993	1	3769700			35607	746	17591	17668	41640;41641	41640					0.035592247287468126
TYQVLAVTF	9	Unmodified	_TYQVLAVTF_					0	0	0		ENST00000474025.1_1_1:31744094-31762265:-|nuORF;ENST00000489853.1_1_1:31732921-31754364:-|nuORF;ENSG00000060688|ENST00000263694|SNRNP40;nc|ENSG00000060688|Q96DI7-2|SNRNP40	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	ENST00000474025.1_1_1:31744094-31762265:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2859985232353	2	521.2844	1040.55425	2.5299	0.0013188	0.6003	0.00031293	3.1302	0.0016317	521.2848714301359	71.936	0.79951	73.76	73.412	74.212	1.824					71	25	4	0	0	0	0.037098	2	30198	30148;30198		78.728	26.46	1	31595000			35608	746	17591	17668	41642;41643	41643					0.035592247287468126
TYRFIRPLK	9	Unmodified	_TYRFIRPLK_					0	0	0		tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2504760622978	3	398.576631	1192.70806	0.81201	0.00032365	-0.87033	-0.00034689	-0.058316	-2.3244E-05	398.5765399924779	25.58	0.52385	26.84	26.68	27.204	1.2594					24	16	2	0	0	0	0.11938	1	10850	10850		0.26902	0	1	448120			35609	16079	17592	17669	41644	41644					0.11941679284927886
TYRFIRPLK	9	Unmodified	_TYRFIRPLK_					0	0	0		tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	tr|A0A553SFU0|A0A553SFU0_NIACIAntibioticbiosynthesismonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_09480PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	398.576631	1192.70806	0.47573	0.00018962	-0.072805	-2.9018E-05	0.40293	0.0001606	398.5768907456628	25.296	0.48678	27.013	26.727	27.213	1.7167	0.086492	0.00041108	NaN	0.26902	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669860			35610	16079	17592	17669							0.11941679284927886
TYRLLRGKGN	10	Unmodified	_TYRLLRGKGN_					0	0	0		ENST00000560567.5_1_15:64710826-64716404:+|nuORF	ENST00000560567.5_1_15:64710826-64716404:+|nuORF	ENST00000560567.5_1_15:64710826-64716404:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3473388552666	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.82019	1	31726	31726		10.074	2.7847	1	9601000			35611	7330	17593	17670	41645	41645					0.09147016757174242
TYRLPKCIAI	10	Unmodified	_TYRLPKCIAI_					0	0	0			REV__ENSG00000183269|ENST00000537935|OR52E8	REV__ENSG00000183269|ENST00000537935|OR52E8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3414794802666	2	589.341726	1176.6689	2.0327	0.0011979	0.87386	0.000515	2.9065	0.0017129	589.3421321319817	74.901	2.0207	74.901	74.206	76.226	0					125	63	3	0	0	0	0.89803	1	31186	31186		0.45834	0.057624	1	2129700	+		35612	11384	17594	17671	41646	41646					0.08763210939082455
TYRNVMEQF	9	Unmodified	_TYRNVMEQF_					0	0	0		ENST00000462558.5_1_7:97937677-98030347:-|nuORF;ENSG00000006453|ENST00000005260|BAIAP2L1	ENST00000462558.5_1_7:97937677-98030347:-|nuORF	ENST00000462558.5_1_7:97937677-98030347:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	594.2814208865166	2	594.279323	1186.54409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.497	1	37.773	37.273	38.273	1.2762								0	0	0	0.21581	1	15321	15321		24.991	9.1438	1				35613	507	17595	17672	41647	41647					-0.041717062681300376
TYRNVMEQF	9	Unmodified	_TYRNVMEQF_					0	0	0		ENST00000462558.5_1_7:97937677-98030347:-|nuORF;ENSG00000006453|ENST00000005260|BAIAP2L1	ENST00000462558.5_1_7:97937677-98030347:-|nuORF	ENST00000462558.5_1_7:97937677-98030347:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	594.2816039919853	2	594.279323	1186.54409	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.879	1	37.697	37.197	38.197	1.8176								0	0	0	0.16786	1	15047	15047		28.495	13.656	1				35614	507	17595	17672	41648	41648					-0.041717062681300376
TYRYRLKYKYP	11	Unmodified	_TYRYRLKYKYP_					0	0	0			REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6223632693291	3	517.620788	1549.84053	1.9058	0.00098649	1.5065	0.00077981	3.4124	0.0017663	517.6221293879064	47.177	4.8522	47.508	46.848	51.7	0.33034					537	158	6	0	0	0	0.91768	5	19775	19737;19775;19812;19850;21081		4.4062	1.9714	1	123180000	+		35615	9494	17596	17673	41649;41650;41651;41652;41653	41650					0.08760659231074897
TYRYRLKYKYP	11	Unmodified	_TYRYRLKYKYP_					0	0	0			REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2919799685478	3	517.620788	1549.84053	2.2415	0.0011603	0.74879	0.00038759	2.9903	0.0015479	517.6214456035781	45.632	1.1112	47.007	46.098	47.209	1.3751					100	34	6	0	0	0	1.0084	1	19113	19113		1.3296	0.82369	1	133340000	+		35616	9494	17596	17673	41654	41654					0.08760659231074897
TYRYRLKYKYP	11	Unmodified	_TYRYRLKYKYP_					0	0	0			REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	REV__KDM5B|p.L837*|1|0.04|ENSG00000117139|chr1:202742464-202742470|ACTGTCA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6223632693291	3	517.620788	1549.84053	1.8949	0.00098084	0.87462	0.00045272	2.7695	0.0014336	517.621592590166	45.077	0.75646	47.037	46.608	47.364	1.9596					92	23	6	0	0	0	0.92747	1	18915	18915		4.1166	1.4854	1	104140000	+		35617	9494	17596	17673	41655	41655					0.08760659231074897
TYSEKTTLF	9	Unmodified	_TYSEKTTLF_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2781249880791	2	545.276772	1088.53899	0.49529	0.00027007	1.23	0.00067071	1.7253	0.00094078	545.7780856776094	32.118	0.27274	33.4	33.231	33.503	1.2813					16	9	2	0	0	0	0.18809	2	13448	13448;13495		34.402	10.381	1	2396700			35618	4569	17597	17674	41656;41657	41656					-0.0017368685910241766
TYSEKTTLF	9	Unmodified	_TYSEKTTLF_					0	0	0		ENSG00000181143|ENST00000397910|MUC16;MUC16|p.E8637Kfs*10|1|0.09|ENSG00000181143|chr19:8950858-8950861|TCTC/-|frameshift_variant;MUC16|p.P9131Lfs*70|1|0.1|ENSG00000181143|chr19:8949378-8949379|-/CATCCTTCCACAA|frameshift_variant;MUC16|p.F9515*|1|0.24|ENSG00000181143|chr19:8948225-8948226|AA/-|frameshift_variant;MUC16|p.T9803Vfs*24|1|0.05|ENSG00000181143|chr19:8947363-8947364|-/GGAC|frameshift_variant;MUC16|p.D9802Vfs*25|1|0.05|ENSG00000181143|chr19:8947365-8947366|-/ATCAACAACACCCAACTGGGTAGAAA|frameshift_variant	ENSG00000181143|ENST00000397910|MUC16	ENSG00000181143|ENST00000397910|MUC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2786743044853	2	545.276772	1088.53899	0.85319	0.00046522	0.76481	0.00041703	1.618	0.00088225	545.2771783329125	31.551	0.30363	33.375	33.186	33.49	1.8246					21	10	3	0	0	0	0.050451	2	13232	13183;13232		67.838	38.757	1	2322600			35619	4569	17597	17674	41658;41659	41659					-0.0017368685910241766
TYSGQIVLW	9	Unmodified	_TYSGQIVLW_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1066.560229480267	1	1066.55677	1065.5495	2.885	0.003077	0.38418	0.00040975	3.2691	0.0034867	1066.557890935924	69.566	0.28121	70.932	70.847	71.128	1.3657					18	8	3	0	0	0	0.023786	1	29218	29218		96.285	40.108	1	2054400			35620	962	17598	17675	41660	41660					0.019343405859899576
TYSGQIVLW	9	Unmodified	_TYSGQIVLW_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7810546755791	2	533.782025	1065.5495	1.4984	0.00079982	-2.9263	-0.001562	-1.4279	-0.00076217	533.7809268986223	69.036	0.54155	70.889	70.468	71.009	1.853					28	17	3	0	0	0	0.22154	1	28967	28967		30.637	7.4881	1	2341600			35621	962	17598	17675	41661	41661					0.019343405859899576
TYSGQIVLW	9	Unmodified	_TYSGQIVLW_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;nc|ENSG00000158560|O14576-4|DYNC1I1;nc|ENSG00000158560|O14576-3|DYNC1I1;nc|ENSG00000158560|O14576-5|DYNC1I1;ENSG00000158560|ENST00000447467|DYNC1I1;nc|ENSG00000158560|O14576|DYNC1I1	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1066.558154284954	1	1066.55677	1065.5495	1.8255	0.001947	0.90295	0.00096304	2.7285	0.00291	1066.5570240198847	68.993	0.36566	70.846	70.737	71.103	1.853					17	11	2	0	0	0	0.091139	1	29011	29011		52.268	21.632	1	1355300			35622	962	17598	17675	41662	41662					0.019343405859899576
TYSIMIQKI	9	Unmodified	_TYSIMIQKI_					0	0	0		nc|ENSG00000111199|Q9HBA0-6|TRPV4;nc|ENSG00000111199|Q9HBA0-2|TRPV4;nc|ENSG00000111199|Q9HBA0-4|TRPV4;nc|ENSG00000111199|Q9HBA0-5|TRPV4;nc|ENSG00000111199|Q9HBA0-3|TRPV4;ENSG00000111199|ENST00000261740|TRPV4	nc|ENSG00000111199|Q9HBA0-6|TRPV4	nc|ENSG00000111199|Q9HBA0-6|TRPV4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.8099853396416	2	548.807185	1095.59982	2.4065	0.0013207	-0.69361	-0.00038066	1.7128	0.00094002	548.8079397420041	47.165	0.28281	49.141	48.999	49.282	1.976					15	8	3	0	0	0	0.15066	1	19748	19748		49.933	20.851	1	1648800			35623	1728	17599	17676	41663	41663					0.055841269194843335
TYSIMIQKI	9	Unmodified	_TYSIMIQKI_					0	0	0		nc|ENSG00000111199|Q9HBA0-6|TRPV4;nc|ENSG00000111199|Q9HBA0-2|TRPV4;nc|ENSG00000111199|Q9HBA0-4|TRPV4;nc|ENSG00000111199|Q9HBA0-5|TRPV4;nc|ENSG00000111199|Q9HBA0-3|TRPV4;ENSG00000111199|ENST00000261740|TRPV4	nc|ENSG00000111199|Q9HBA0-6|TRPV4	nc|ENSG00000111199|Q9HBA0-6|TRPV4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	548.807185	1095.59982	2.0513	0.0011258	0.722	0.00039624	2.7733	0.001522	548.8080247083591	47.664	0.34585	49.046	48.858	49.204	1.3825	-0.047264	0.00060179	NaN	49.933	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1449400			35624	1728	17599	17676							0.055841269194843335
TYSPALNKMF	10	Oxidation (M)	_TYSPALNKM(Oxidation (M))F_		TYSPALNKM(1)F		TYSPALNKM(46)F	0	0	1		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.2936279177666	2	594.291899	1186.56925	0.83165	0.00049425	0.48154	0.00028617	1.3132	0.00078042	594.292719044053	30.484	0.31007	31.767	31.595	31.905	1.2825					21	9	3	0	0	0	0.22673	1	12773	12773		45.7	26.443	1	1003100			35625	7000	17600	17677	41664	41664		110			-0.016576514655525898
TYSPALNKMF	10	Oxidation (M)	_TYSPALNKM(Oxidation (M))F_		TYSPALNKM(1)F		TYSPALNKM(46)F	0	0	1		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.2913085818291	2	594.291899	1186.56925	0.79693	0.00047361	0.43685	0.00025961	1.2338	0.00073323	594.2917730655391	30.798	0.34255	32.081	31.905	32.247	1.2825					21	10	3	0	0	0	0.22673	1	12927	12927		45.7	26.443	1	1121000			35626	7000	17600	17677	41665	41665		110			-0.016576514655525898
TYSPALNKMF	10	Oxidation (M)	_TYSPALNKM(Oxidation (M))F_		TYSPALNKM(1)F		TYSPALNKM(52)F	0	0	1		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.2928344607353	2	594.291899	1186.56925	0.87615	0.00052069	0.46064	0.00027375	1.3368	0.00079444	594.2920139326548	29.998	0.24712	31.813	31.676	31.923	1.8151					16	7	3	0	0	0	0.1784	1	12580	12580		51.63	32.373	1	889920			35627	7000	17600	17677	41666	41666		110			-0.016576514655525898
TYSPALNKMF	10	Oxidation (M)	_TYSPALNKM(Oxidation (M))F_		TYSPALNKM(1)F		TYSPALNKM(54)F	0	0	1		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.2930175662041	2	594.291899	1186.56925	0.88812	0.0005278	-0.37864	-0.00022502	0.50948	0.00030278	594.2915429159705	30.258	0.4024	32.073	31.923	32.325	1.8151					20	12	3	0	0	0	0.16044	1	12687	12687		53.833	34.576	1	1696500			35628	7000	17600	17677	41667	41667		110			-0.016576514655525898
TYSPALNKMF	10	Unmodified	_TYSPALNKMF_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.2957031130791	2	586.294442	1170.57433	1.5833	0.00092831	0.029331	1.7196E-05	1.6127	0.00094551	586.2946782253755	46.164	0.6531	47.539	47.209	47.862	1.3751					62	20	5	0	0	0	0.043055	4	19325	19276;19325;19364;19410		92.653	65.77	1	21948000			35629	7000	17600	17678	41668;41669;41670;41671	41669					-0.004133476029210215
TYSPALNKMF	10	Unmodified	_TYSPALNKMF_					0	0	0		ENST00000505014.5_1_17:7578140-7579834:-|nuORF;TP53|p.C135Y|1|0.47|ENSG00000141510|chr17:7675208-7675208|C/T|missense_variant;TP53|p.N288Kfs*18|1|0.7|ENSG00000141510|chr17:7673756-7673757|-/T|frameshift_variant;TP53|p.P316Sfs*21|1|0.91|ENSG00000141510|chr17:7673582-7673583|-/A|frameshift_variant;nc|ENSG00000141510|P04637-2|TP53;TP53|p.V272Cfs*73|1|0.61|ENSG00000141510|chr17:7673806-7673806|C/-|frameshift_variant;TP53|p.R342Efs*3|1|0.71|ENSG00000141510|chr17:7670685-7670685|G/-|frameshift_variant;TP53|p.R273Lfs*72|1|0.81|ENSG00000141510|chr17:7673802-7673802|C/-|frameshift_variant;TP53|p.T284Qfs*61|1|0.58|ENSG00000141510|chr17:7673770-7673770|T/-|frameshift_variant;TP53|p.C277Vfs*68|1|0.58|ENSG00000141510|chr17:7673792-7673792|G/-|frameshift_variant;TP53|p.E343Gfs*2|1|0.53|ENSG00000141510|chr17:7670681-7670681|T/-|frameshift_variant;nc|ENSG00000141510|P04637-6|TP53;TP53|p.R333Vfs*12|1|0.81|ENSG00000141510|chr17:7670712-7670712|G/-|frameshift_variant;TP53|p.L330Ffs*15|1|0.51|ENSG00000141510|chr17:7673540-7673540|G/-|frameshift_variant;TP53|p.F338Lfs*7|1|0.55|ENSG00000141510|chr17:7670695-7670695|G/-|frameshift_variant;TP53|p.R282Pfs*65|1|0.8|ENSG00000141510|chr17:7673775-7673776|-/CGGCG|frameshift_variant;nc|ENSG00000141510|P04637-3|TP53;TP53|p.M340Sfs*8|1|0.75|ENSG00000141510|chr17:7670690-7670691|-/TCAC|frameshift_variant;nc|ENSG00000141510|P04637-4|TP53;TP53|p.N345Mfs*25|1|0.68|ENSG00000141510|chr17:7670677-7670677|C/-|frameshift_variant;TP53|p.L348Wfs*22|1|0.63|ENSG00000141510|chr17:7670666-7670666|A/-|frameshift_variant;TP53|p.K320Rfs*25|1|0.82|ENSG00000141510|chr17:7673571-7673571|C/-|frameshift_variant;nc|ENSG00000141510|P04637-5|TP53;TP53|p.R209Hfs*5|1|0.75|ENSG00000141510|chr17:7674902-7674906|TTTCT/-|frameshift_variant;TP53|p.I195Nfs*14|1|0.72|ENSG00000141510|chr17:7674947-7674948|-/T|frameshift_variant;TP53|p.Q144Afs*16|1|0.53|ENSG00000141510|chr17:7675152-7675182|CGGGCGGGGGTGTGGAATCAACCCACAGCTG/-|frameshift_variant;TP53|p.T150Afs*16|1|0.7|ENSG00000141510|chr17:7675152-7675164|CGGGCGGGGGTGT/-|frameshift_variant;TP53|p.T140Mfs*28|1|0.79|ENSG00000141510|chr17:7675187-7675193|GGGCAGG/-|frameshift_variant;TP53|p.C141Afs*29|2|0.6|ENSG00000141510|chr17:7675192-7675192|G/-|frameshift_variant;TP53|p.P152Rfs*18|1|0.42|ENSG00000141510|chr17:7675157-7675157|G/-|frameshift_variant;TP53|p.Y163Lfs*18|1|0.43|ENSG00000141510|chr17:7675125-7675126|-/G|frameshift_variant;TP53|p.S149Ffs*32|1|0.88|ENSG00000141510|chr17:7675166-7675167|-/A|frameshift_variant;TP53|p.Q167Tfs*14|1|0.69|ENSG00000141510|chr17:7675113-7675114|-/T|frameshift_variant;TP53|p.Q144Lfs*5|1|0.58|ENSG00000141510|chr17:7675181-7675182|-/A|frameshift_variant;TP53|p.P223*|1|0.76|ENSG00000141510|chr17:7674864-7674865|GC/-|frameshift_variant;TP53|p.D228*|2|0.86|ENSG00000141510|chr17:7674281-7674282|-/A|frameshift_variant;TP53|p.N239*|1|0.81|ENSG00000141510|chr17:7674248-7674249|-/A|frameshift_variant;TP53|p.Q192Sfs*55|1|0.96|ENSG00000141510|chr17:7674957-7674957|G/-|frameshift_variant;TP53|p.N210Tfs*37|1|0.89|ENSG00000141510|chr17:7674902-7674902|T/-|frameshift_variant;TP53|p.V218Cfs*29|1|0.71|ENSG00000141510|chr17:7674879-7674879|C/-|frameshift_variant;TP53|p.C242Afs*5|2|0.84|ENSG00000141510|chr17:7674240-7674240|G/-|frameshift_variant;TP53|p.H178Tfs*69|1|1.0|ENSG00000141510|chr17:7675080-7675080|G/-|frameshift_variant;ENSG00000141510|ENST00000269305|TP53	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	ENST00000505014.5_1_17:7578140-7579834:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.2957031130791	2	586.294442	1170.57433	1.3719	0.00080437	0.33095	0.00019403	1.7029	0.0009984	586.2948154437415	45.677	0.6892	47.647	47.375	48.064	1.9703					59	21	4	0	0	0	0.057404	4	19149	19068;19111;19149;19188		96.111	62.008	1	19245000			35630	7000	17600	17678	41672;41673;41674;41675	41674					-0.004133476029210215
TYSRQTEM	8	Unmodified	_TYSRQTEM_					0	0	0			REV__ENSG00000106560|ENST00000223293|GIMAP2	REV__ENSG00000106560|ENST00000223293|GIMAP2	MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2281371951103	2	508.229299	1014.44404	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.15	1	100.33	99.834	100.83	0.18047								0	0	0	1.0178	1	42148	42148		2.0598	1.2661	1		+		35631	9212	17601	17679	41676	41676					-0.06259943601924078
TYSTLMVDL	9	Unmodified	_TYSTLMVDL_					0	0	0			REV__ENSG00000173208|ENST00000308666|ABCD2	REV__ENSG00000173208|ENST00000308666|ABCD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	348.1760436892509	3	348.175692	1041.50525	0.9705	0.00033791	0.50472	0.00017573	1.4752	0.00051364	348.1758066503355	68.486	0.39733	69.856	69.667	70.064	1.3699					28	12	3	0	0	0	0.68551	1	28753	28753		8.1555	0	1	1695300	+		35632	11087	17602	17680	41677	41677					-0.01384431622500415
TYSTLMVDL	9	Unmodified	_TYSTLMVDL_					0	0	0			REV__ENSG00000173208|ENST00000308666|ABCD2	REV__ENSG00000173208|ENST00000308666|ABCD2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	348.175692	1041.50525	0.9705	0.00033791	0.50472	0.00017573	1.4752	0.00051364	348.1758066503355	68.486	0.39733	69.856	69.667	70.064	1.3699	0.014081	0.00032557	NaN	8.1555	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1695300	+		35633	11087	17602	17680							-0.01384431622500415
TYSTLMVDL	9	Unmodified	_TYSTLMVDL_					0	0	0			REV__ENSG00000173208|ENST00000308666|ABCD2	REV__ENSG00000173208|ENST00000308666|ABCD2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	348.175692	1041.50525	1.7585	0.00061227	-0.23408	-8.1501E-05	1.5244	0.00053077	348.1754261438782	67.958	0.33757	69.828	69.611	69.949	1.87	-0.014081	-0.00044613	NaN	8.1555	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	999730	+		35634	11087	17602	17680							-0.01384431622500415
TYTDLLSVI	9	Unmodified	_TYTDLLSVI_					0	0	0		ENST00000526447.1_1_11:67274830-67275269:-|nuORF;ENSG00000167797|ENST00000301488|CDK2AP2;ENST00000525402.5_1_11:67274418-67275269:-|nuORF	ENST00000526447.1_1_11:67274830-67275269:-|nuORF	ENST00000526447.1_1_11:67274830-67275269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1024.556567370892	1	1024.5561	1023.54883	2.3302	0.0023874	0.14733	0.00015094	2.4775	0.0025384	1024.5584119927041	82.85	0.15639	84.062	83.951	84.108	1.2125					8	4	2	0	0	0	0.15456	1	34773	34773		50.855	0	1	941060			35635	3995	17603	17681	41678	41678					0.0379950114629537
TYTDRVFFL	9	Unmodified	_TYTDRVFFL_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF;TUBGCP6-PLXNB2|1|fusion;ENSG00000196576|ENST00000359337|PLXNB2	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3035156130791	2	581.300581	1160.58661	2.2932	0.0013331	-1.2553	-0.00072971	1.0379	0.00060335	581.30041772705	63.484	0.36257	64.897	64.723	65.085	1.4134					31	11	3	0	0	0	0.11606	1	26590	26590		43.982	18.991	1	3618500			35636	4948	17604	17682	41679	41679					0.012740121317847297
TYTDRVFFL	9	Unmodified	_TYTDRVFFL_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF;TUBGCP6-PLXNB2|1|fusion;ENSG00000196576|ENST00000359337|PLXNB2	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3023559451103	2	581.300581	1160.58661	2.3135	0.0013448	-0.81177	-0.00047189	1.5017	0.00087294	581.3008720454532	62.914	0.43041	64.859	64.628	65.058	1.9444					36	13	4	0	0	0	0.16434	1	26347	26347		37.075	16.621	1	4230700			35637	4948	17604	17682	41680	41680					0.012740121317847297
TYTDVTPRQF	10	Unmodified	_TYTDVTPRQF_					0	0	0		ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF	ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.3054687380791	2	614.303852	1226.59315	0.6667	0.00040956	2.9696	0.0018242	3.6363	0.0022338	614.3053040537407	29.964	0.33718	31.246	31.104	31.441	1.2825					20	10	3	0	0	0	0.60754	2	12618	12550;12618		22.658	14.503	1	863800			35638	1046	17605	17683	41681;41682	41682					-0.011080947075242875
TYTDVTPRQF	10	Unmodified	_TYTDVTPRQF_					0	0	0		ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF	ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.3043701052666	2	614.303852	1226.59315	0.69577	0.00042741	0.5681	0.00034899	1.2639	0.0007764	614.3037665948209	29.553	0.33222	31.352	31.174	31.506	1.7987					17	10	2	0	0	0	0.63089	1	12400	12400		21.59	9.3495	1	649450			35639	1046	17605	17683	41683	41683					-0.011080947075242875
TYTDVTPRQFF	11	Unmodified	_TYTDVTPRQFF_					0	0	0		ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF	ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	687.8370849490166	2	687.838059	1373.66157	0.85935	0.00059109	-1.1378	-0.0007826	-0.27841	-0.0001915	687.837309908841	50.913	0.48238	52.307	51.986	52.468	1.3938					41	15	3	0	0	0	1.531E-06	3	21290	21245;21290;21347		192.32	144.57	1	5716900			35640	1046	17606	17684	41684;41685;41686	41685					-0.010318501276969982
TYTDVTPRQFF	11	Unmodified	_TYTDVTPRQFF_					0	0	0		ENSG00000084090|ENST00000337288|STARD7;ENST00000462501.1_1_2:96858901-96861247:-|nuORF	ENSG00000084090|ENST00000337288|STARD7	ENSG00000084090|ENST00000337288|STARD7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	687.8376342654228	2	687.838059	1373.66157	0.73077	0.00050265	-1.0904	-0.00075	-0.35961	-0.00024735	687.8375849884906	50.293	0.50955	52.27	52.007	52.517	1.9772					47	16	4	0	0	0	6.6186E-05	3	21068	21022;21068;21121		187.14	141.44	1	7787600			35641	1046	17606	17684	41687;41688;41689	41688					-0.010318501276969982
TYTGFDTFKL	10	Unmodified	_TYTGFDTFKL_					0	0	0			REV__nc|ENSG00000139915|Q7Z553-2|MDGA2	REV__nc|ENSG00000139915|Q7Z553-2|MDGA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3008300662041	2	596.797872	1191.58119	1.8819	0.0011231	2.501	0.0014926	4.3829	0.0026157	596.8002007657952	48.104	0.18922	49.492	49.396	49.585	1.388					7	5	2	0	0	0	0.82659	1	20140	20140		9.3831	2.66	1	355890	+		35642	10113	17607	17685	41690	41690					-0.0069371145070817875
TYTGKRKRK	9	Unmodified	_TYTGKRKRK_					0	0	0		tr|A0A553SLV2|A0A553SLV2_NIACISerine/threonineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_21330PE=3SV=1	tr|A0A553SLV2|A0A553SLV2_NIACISerine/threonineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_21330PE=3SV=1	tr|A0A553SLV2|A0A553SLV2_NIACISerine/threonineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_21330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3495361208916	2	569.346189	1136.67783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.16	1	104.32	103.82	104.82	0.16055								0	0	0	0.42693	1	44068	44068		2.0598	0.86641	1				35643	16357	17608	17686	41691	41691					0.11495320619746963
TYTSNLVRL	9	Unmodified	_TYTSNLVRL_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16;ENST00000475133.5_1_1:15892828-15894669:+|nuORF;nc|ENSG00000116138|Q9Y2G8-2|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.7991821169853	2	533.798206	1065.58186	2.2269	0.0011887	-0.2835	-0.00015133	1.9434	0.0010374	533.7981519926442	39.018	0.31059	40.314	40.164	40.475	1.2961					21	9	3	0	0	0	0.037098	1	16361	16361		78.728	45.283	1	4452800			35644	1952	17609	17687	41692	41692					0.051691279890064834
TYTSNLVRL	9	Unmodified	_TYTSNLVRL_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16;ENST00000475133.5_1_1:15892828-15894669:+|nuORF;nc|ENSG00000116138|Q9Y2G8-2|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.7989379763603	2	533.798206	1065.58186	1.3419	0.00071629	0.95725	0.00051098	2.2991	0.0012273	533.7984146205439	38.42	0.37616	40.257	40.053	40.429	1.8366					26	11	3	0	0	0	0.093059	1	16111	16111		51.63	24.407	1	3287100			35645	1952	17609	17687	41693	41693					0.051691279890064834
TYTSYLDKF	9	Unmodified	_TYTSYLDKF_					0	0	0		ENSG00000069956|ENST00000261845|MAPK6	ENSG00000069956|ENST00000261845|MAPK6	ENSG00000069956|ENST00000261845|MAPK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2794067263603	2	569.276772	1136.53899	1.7243	0.00098162	-0.1349	-7.6794E-05	1.5894	0.00090482	569.2773288989157	46.039	0.28433	47.415	47.24	47.524	1.3751					17	8	3	0	0	0	0.28372	1	19296	19296		26.268	12.362	1	674030			35646	845	17610	17688	41694	41694					-0.023816868590984086
TYTSYLDKF	9	Unmodified	_TYTSYLDKF_					0	0	0		ENSG00000069956|ENST00000261845|MAPK6	ENSG00000069956|ENST00000261845|MAPK6	ENSG00000069956|ENST00000261845|MAPK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2765991091728	2	569.276772	1136.53899	1.5359	0.00087434	-0.92446	-0.00052627	0.61142	0.00034807	569.2760466557419	45.535	0.25714	47.5	47.305	47.562	1.9655					12	7	2	0	0	0	0.42305	1	19069	19069		19.257	5.3509	1	404300			35647	845	17610	17688	41695	41695					-0.023816868590984086
TYTYEKLLW	9	Unmodified	_TYTYEKLLW_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8201782107353	2	608.816064	1215.61758	1.4306	0.00087098	2.1592	0.0013146	3.5898	0.0021855	608.8175719618591	58.73	0.31678	60.148	59.972	60.289	1.4181					16	9	2	0	0	0	0.033102	2	24594	24594;24645		82.529	56.261	1	2575000			35648	4010	17611	17689	41696;41697	41696					0.01839165445994695
TYTYEKLLW	9	Unmodified	_TYTYEKLLW_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8193847537041	2	608.816064	1215.61758	1.1099	0.00067574	1.7613	0.0010723	2.8713	0.0017481	608.8170457678111	58.099	0.31665	60.068	59.993	60.31	1.969					17	9	2	0	0	0	0.053939	2	24383	24383;24432		66.457	40.189	1	2558400			35649	4010	17611	17689	41698;41699	41698					0.01839165445994695
TYVENLRLL	9	Unmodified	_TYVENLRLL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;SYNE2|p.D1390Gfs*12|1|0.07|ENSG00000054654|chr14:64003101-64003102|-/GTCTTTCCACTGTCTCTTTTGGGCATGA|frameshift_variant	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8221923708916	2	560.821681	1119.62881	1.4915	0.00083648	-1.4604	-0.00081902	0.031124	1.7455E-05	560.8212221802087	53.931	0.8165	55.332	55.111	55.927	1.4005					55	26	3	0	0	0	0.014446	3	22590	22542;22590;22643		114.65	68.628	1	11614000			35650	716	17612	17690	41700;41701;41702	41701					0.07377987540144204
TYVENLRLL	9	Unmodified	_TYVENLRLL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;SYNE2|p.D1390Gfs*12|1|0.07|ENSG00000054654|chr14:64003101-64003102|-/GTCTTTCCACTGTCTCTTTTGGGCATGA|frameshift_variant	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8206664919853	2	560.821681	1119.62881	0.6125	0.0003435	-0.53941	-0.00030251	0.073083	4.0986E-05	560.8212037710607	53.432	0.48653	55.402	55.203	55.69	1.9697					25	15	2	0	0	0	0.037863	2	22342	22342;22391		85.642	43.479	1	7026700			35651	716	17612	17690	41703;41704	41703					0.07377987540144204
TYVFATSVR	9	Unmodified	_TYVFATSVR_					0	0	0			REV__ENSG00000084674|ENST00000233242|APOB	REV__ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2806884646416	2	522.279649	1042.54475	1.8297	0.00095564	0.71785	0.00037492	2.5476	0.0013306	522.2802417471455	39.99	0.43742	41.852	41.646	42.083	1.8624					39	13	4	0	0	0	0.10473	1	16732	16732		47.749	3.9763	1	5387700	+		35652	8844	17613	17691	41705	41705					0.025174564432290936
TYVGIGWLI	9	Unmodified	_TYVGIGWLI_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.569140613079	1	1021.57169	1020.56442	3.5602	0.003637	-3.6366	-0.0037151	-0.076396	-7.8044E-05	1021.565834519998	93.88	0.31808	94.752	94.513	94.831	0.87176					11	9	2	0	0	0	0.03795	1	39500	39500		77.984	38.027	1	894760			35653	2163	17614	17692	41706	41706					0.054958324539938985
TYVGIGWLI	9	Unmodified	_TYVGIGWLI_					0	0	0		ENSG00000122642|ENST00000242209|FKBP9;nc|ENSG00000122642|O95302-3|FKBP9;ENST00000494374.5_1_7:32997059-33028356:+|nuORF	ENSG00000122642|ENST00000242209|FKBP9	ENSG00000122642|ENST00000242209|FKBP9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1021.574938952923	1	1021.57169	1020.56442	3.3336	0.0034055	0.8788	0.00089776	4.2124	0.0043032	1021.5735068200422	93.31	0.2519	94.587	94.452	94.704	1.277					10	7	2	0	0	0	0.031324	1	39263	39263		85.357	41.498	1	1027300			35654	2163	17614	17692	41707	41707					0.054958324539938985
TYVPWPLML	9	Unmodified	_TYVPWPLML_					0	0	0		ENST00000567039.1_1_15:43620629-43622752:-|nuORF;ENSG00000168806|ENST00000305641|LCMT2	ENST00000567039.1_1_15:43620629-43622752:-|nuORF	ENST00000567039.1_1_15:43620629-43622752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2983276247978	2	560.298996	1118.58344	3.7567	0.0021049	-3.9779	-0.0022288	-0.22124	-0.00012396	560.2969360489984	97.446	0.14246	97.731	97.63	97.772	0.28442					9	5	3	0	0	0	0.0068741	1	41008	41008		114.94	84.719	1	4741100			35655	4054	17615	17693	41708	41708					0.02889045753386199
TYVPWPLML	9	Unmodified	_TYVPWPLML_					0	0	0		ENST00000567039.1_1_15:43620629-43622752:-|nuORF;ENSG00000168806|ENST00000305641|LCMT2	ENST00000567039.1_1_15:43620629-43622752:-|nuORF	ENST00000567039.1_1_15:43620629-43622752:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.2984496951103	2	560.298996	1118.58344	3.2359	0.0018131	-4.2104	-0.0023591	-0.97451	-0.00054602	560.296750593075	97.334	0.11041	97.64	97.574	97.685	0.3062					5	3	2	0	0	0	0.0024698	1	40948	40948		129.2	91.049	1	5559700			35656	4054	17615	17693	41709	41709					0.02889045753386199
TYVRWYTQL	9	Unmodified	_TYVRWYTQL_					0	0	0		ENST00000482889.1_1_1:109472820-109486481:-|nuORF;nc|ENSG00000121940|Q96S66-2|CLCC1;ENSG00000121940|ENST00000369969|CLCC1	ENST00000482889.1_1_1:109472820-109486481:-|nuORF	ENST00000482889.1_1_1:109472820-109486481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.3189575076103	2	615.319306	1228.62406	0.54106	0.00033293	-2.9523	-0.0018166	-2.4112	-0.0014837	615.317923013369	51.464	0.3592	52.858	52.65	53.009	1.3938					14	11	2	0	0	0	0.050451	2	21503	21503;21556		67.838	36.57	1	1733600			35657	2146	17616	17694	41710;41711	41710					0.018891033973659432
TYVRWYTQL	9	Unmodified	_TYVRWYTQL_					0	0	0		ENST00000482889.1_1_1:109472820-109486481:-|nuORF;nc|ENSG00000121940|Q96S66-2|CLCC1;ENSG00000121940|ENST00000369969|CLCC1	ENST00000482889.1_1_1:109472820-109486481:-|nuORF	ENST00000482889.1_1_1:109472820-109486481:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	615.319306	1228.62406	-0.06463	-3.9768E-05	-3.27	-0.0020121	-3.3346	-0.0020519	615.3178440531967	50.828	0.27609	52.803	52.606	52.882	1.9753	-0.027431	-0.00029284	NaN	67.838	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1463400			35658	2146	17616	17694							0.018891033973659432
TYVSGTLRF	9	Unmodified	_TYVSGTLRF_					0	0	0		ENSG00000134255|ENST00000357172|CEPT1	ENSG00000134255|ENST00000357172|CEPT1	ENSG00000134255|ENST00000357172|CEPT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.2795898318291	2	522.279649	1042.54475	2.4392	0.0012739	-0.77517	-0.00040486	1.664	0.00086906	522.279205727794	40.403	0.43061	41.713	41.514	41.945	1.3102					34	13	3	0	0	0	0.019486	3	16949	16904;16949;17003		99.755	30.65	1	5518800			35659	2604	17617	17695	41712;41713;41714	41713					0.02517456443251831
TYVSGTLRF	9	Unmodified	_TYVSGTLRF_					0	0	0		ENSG00000134255|ENST00000357172|CEPT1	ENSG00000134255|ENST00000357172|CEPT1	ENSG00000134255|ENST00000357172|CEPT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.2811767458916	2	522.279649	1042.54475	1.8297	0.00095564	0.71785	0.00037492	2.5476	0.0013306	522.2802417471455	39.99	0.43742	41.852	41.646	42.083	1.8624					39	13	4	0	0	0	0.043696	2	16780	16780;16822		72.968	16.791	1	5387700			35660	2604	17617	17695	41715;41716	41715					0.02517456443251831
TYVTILPEL	9	Unmodified	_TYVTILPEL_					0	0	0		XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;XRN1|p.G1339Efs*6|1|0.06|ENSG00000114127|chr3:142333013-142333014|-/T|frameshift_variant;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1048.595141589642	1	1048.59249	1047.58521	2.6743	0.0028042	0.44975	0.00047161	3.124	0.0032758	1048.5918852605007	80.675	0.24075	81.908	81.742	81.983	1.2332					10	7	2	0	0	0	0.059546	1	33875	33875		64.236	15.89	1	1641400			35661	1852	17618	17696	41717	41717					0.06332378042998243
TYVTILPEL	9	Unmodified	_TYVTILPEL_					0	0	0		XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant;ENST00000472697.5_1_3:142095319-142144369:-|nuORF;XRN1|p.G1339Efs*6|1|0.06|ENSG00000114127|chr3:142333013-142333014|-/T|frameshift_variant;ENSG00000114127|ENST00000392981|XRN1;nc|ENSG00000114127|Q8IZH2|XRN1;nc|ENSG00000114127|Q8IZH2-3|XRN1	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	XRN1|p.G776Rfs*16|1|0.03|ENSG00000114127|chr3:142397343-142397344|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1048.59249	1047.58521	2.084	0.0021853	-2.1568	-0.0022616	-0.072744	-7.6279E-05	1048.591873044861	80.16	0.2988	81.876	81.726	82.025	1.7167	-0.015983	-0.0014717	NaN	64.236	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1061200			35662	1852	17618	17696							0.06332378042998243
TYYRGFLTL	9	Unmodified	_TYYRGFLTL_					0	0	0		ENST00000554761.5_1_14:90397883-90418750:-|nuORF;ENST00000553871.5_1_14:90263589-90418750:-|nuORF;nc|ENSG00000140025|Q9BUY7-6|EFCAB11;nc|ENSG00000140025|Q9BUY7-3|EFCAB11;ENST00000556639.5_1_14:90302986-90416480:-|nuORF;nc|ENSG00000140025|Q9BUY7-2|EFCAB11;nc|ENSG00000140025|Q9BUY7-5|EFCAB11;ENSG00000140025|ENST00000316738|EFCAB11	ENST00000554761.5_1_14:90397883-90418750:-|nuORF	ENST00000554761.5_1_14:90397883-90418750:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3028442263603	2	567.303124	1132.5917	0.64239	0.00036443	-0.31147	-0.0001767	0.33092	0.00018773	567.3027616868902	58.022	0.54148	59.44	59.273	59.815	1.4181					51	23	3	0	0	0	4.7293E-05	4	24318	24276;24318;24355;24393		152.89	87.651	1	26063000			35663	2900	17619	17697	41718;41719;41720;41721	41719					0.030703159943641367
TYYRGFLTL	9	Unmodified	_TYYRGFLTL_					0	0	0		ENST00000554761.5_1_14:90397883-90418750:-|nuORF;ENST00000553871.5_1_14:90263589-90418750:-|nuORF;nc|ENSG00000140025|Q9BUY7-6|EFCAB11;nc|ENSG00000140025|Q9BUY7-3|EFCAB11;ENST00000556639.5_1_14:90302986-90416480:-|nuORF;nc|ENSG00000140025|Q9BUY7-2|EFCAB11;nc|ENSG00000140025|Q9BUY7-5|EFCAB11;ENSG00000140025|ENST00000316738|EFCAB11	ENST00000554761.5_1_14:90397883-90418750:-|nuORF	ENST00000554761.5_1_14:90397883-90418750:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3025390505791	2	567.303124	1132.5917	0.46398	0.00026322	-0.34483	-0.00019562	0.11915	6.7596E-05	567.3027143213734	57.469	0.433	59.438	59.22	59.653	1.9684					61	25	3	0	0	0	0.0051116	4	24114	24036;24073;24114;24156		121.53	67.701	1	26948000			35664	2900	17619	17697	41722;41723;41724;41725	41724					0.030703159943641367
TYYWGFAAW	9	Unmodified	_TYYWGFAAW_					0	0	0		ENST00000596953.5_1_19:14640508-14675852:+|nuORF;ENSG00000099797|ENST00000215567|TECR;ENST00000593637.5_1_19:14674952-14675852:+|nuORF;ENST00000599101.5_1_19:14675534-14676680:+|nuORF;ENST00000593775.5_1_19:14675534-14676680:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7701293826103	2	582.761092	1163.50763	5.6451	0.0032897	-0.95721	-0.00055783	4.6879	0.0027319	582.7605449231049	88.415	0.25684	89.472	89.369	89.626	1.0562					12	7	2	0	0	0	0.66839	1	37252	37252		8.5933	3.3626	1	825150			35665	1215	17620	17698	41726	41726					-0.06758215102536269
TYYWGFAAW	9	Unmodified	_TYYWGFAAW_					0	0	0		ENST00000596953.5_1_19:14640508-14675852:+|nuORF;ENSG00000099797|ENST00000215567|TECR;ENST00000593637.5_1_19:14674952-14675852:+|nuORF;ENST00000599101.5_1_19:14675534-14676680:+|nuORF;ENST00000593775.5_1_19:14675534-14676680:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	ENST00000596953.5_1_19:14640508-14675852:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.7640869021416	2	582.761092	1163.50763	4.6064	0.0026845	1.6233	0.00094602	6.2298	0.0036305	582.7615711734919	88.046	0.3519	89.493	89.284	89.636	1.4467					14	10	2	0	0	0	0.66839	1	37121	37121		8.5933	3.8373	1	1161300			35666	1215	17620	17698	41727	41727					-0.06758215102536269
VAAGRLGG	8	Unmodified	_VAAGRLGG_					0	0	0		ENST00000256545.8_1_15:34394059-34394101:-|nuORF	ENST00000256545.8_1_15:34394059-34394101:-|nuORF	ENST00000256545.8_1_15:34394059-34394101:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.2061950564384	2	350.708663	699.402772	0.75886	0.00026614	0.85966	0.00030149	1.6185	0.00056763	350.7079852021413	29.955	0.35907	30.241	29.993	30.353	0.2859					15	11	2	0	0	0	2.3239	1	12562	12562		0.69038	0	1	521540			35667	5598	17621	17699	41728	41728					0.041047082115824196
VAAIEPPL	8	Unmodified	_VAAIEPPL_					0	0	0			REV__ENST00000523948.5_1_8:56686169-56737149:+|nuORF	REV__ENST00000523948.5_1_8:56686169-56737149:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.2412597537041	2	405.242004	808.469455	0.30671	0.00012429	-3.0388	-0.0012315	-2.7321	-0.0011072	405.2406523183783	67.156	0.99142	67.156	66.64	67.632	0					58	31	2	0	0	0	0.89176	1	27897	27897		0.79363	0	1	2597000	+		35668	10024	17622	17700	41729	41729					0.057558989827953155
VAAKIPVG	8	Unmodified	_VAAKIPVG_					0	0	0			REV__tr|A0A553SNV9|A0A553SNV9_NIACIPolyribonucleotidenucleotidyltransferaseOS=NialliacirculansOX=1397GN=pnpPE=3SV=1	REV__tr|A0A553SNV9|A0A553SNV9_NIACIPolyribonucleotidenucleotidyltransferaseOS=NialliacirculansOX=1397GN=pnpPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7439147830009	2	377.744714	753.474875	2.5823	0.00097546	-2.0959	-0.0007917	0.48648	0.00018376	377.7431330932197	73.725	1.6226	75.521	74.278	75.9	1.7962					69	51	2	0	0	0	0.89176	1	30914	30914		0.79363	0	1	3559300	+		35669	15064	17623	17701	41730	41730					0.08827622565274851
VAALAGLLV	9	Unmodified	_VAALAGLLV_					0	0	0		tr|A0A553SHV7|A0A553SHV7_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13695PE=4SV=1	tr|A0A553SHV7|A0A553SHV7_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13695PE=4SV=1	tr|A0A553SHV7|A0A553SHV7_NIACIBranched-chainaminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	826.5408203005791	1	826.539666	825.53239	1.4004	0.0011575	-0.17785	-0.000147	1.2225	0.0010105	826.539561654603	79.444	0.49141	81.161	80.921	81.413	1.7167					32	15	3	0	0	0	0.11074	2	33334	33334;33385		45.75	0	1	3898500			35670	16171	17624	17702	41731;41732	41731					0.11264464770840732
VAALIFGYIQI	11	Unmodified	_VAALIFGYIQI_					0	0	0		ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant;ABCB5|p.G861Qfs*7|1|0.04|ENSG00000004846|chr7:20723174-20723175|-/CAGCAAAACTATGAGGCCTA|frameshift_variant;ENSG00000004846|ENST00000404938|ABCB5	ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant	ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3581420779228	2	604.357899	1206.70125	3.7787	0.0022837	-3.275	-0.0019793	0.50363	0.00030437	604.3561833788876	86.024	0.48603	87.571	87.203	87.69	1.547					50	19	3	0	0	0	0.89563	1	36117	36117		10.074	0	1	57504000			35671	5	17625	17703	41733	41733					0.10616321613701984
VAALIFGYIQI	11	Unmodified	_VAALIFGYIQI_					0	0	0		ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant;ABCB5|p.G861Qfs*7|1|0.04|ENSG00000004846|chr7:20723174-20723175|-/CAGCAAAACTATGAGGCCTA|frameshift_variant;ENSG00000004846|ENST00000404938|ABCB5	ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant	ABCB5|p.R410Sfs*23|1|0.18|ENSG00000004846|chr7:20650042-20650061|CAGAATTAAGTCTGGAGAGA/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	604.357899	1206.70125	2.4803	0.001499	-2.7399	-0.0016559	-0.25967	-0.00015693	604.3564272727872	86.972	0.89062	87.216	86.606	87.496	0.24387	-0.10971	0.00044873	NaN	10.074	149	35	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	91881000			35672	5	17625	17703							0.10616321613701984
VAANRVIIF	9	Unmodified	_VAANRVIIF_					0	0	0		nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;ENSG00000085224|ENST00000373344|ATRX	nc|ENSG00000085224|P46100-2|ATRX	nc|ENSG00000085224|P46100-2|ATRX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.8090087771416	2	501.808377	1001.6022	1.2071	0.00060574	-3.1153	-0.0015633	-1.9082	-0.00095754	501.8059052865769	45.537	0.32079	47.503	47.338	47.659	1.9661					13	9	2	0	0	0	0.10294	1	19065	19065		48.346	2.5959	1	847250			35673	1059	17626	17704	41734	41734					0.10146343439464545
VAANRVIIF	9	Unmodified	_VAANRVIIF_					0	0	0		nc|ENSG00000085224|P46100-2|ATRX;nc|ENSG00000085224|P46100-5|ATRX;nc|ENSG00000085224|P46100-3|ATRX;nc|ENSG00000085224|P46100-4|ATRX;ENSG00000085224|ENST00000373344|ATRX	nc|ENSG00000085224|P46100-2|ATRX	nc|ENSG00000085224|P46100-2|ATRX	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	501.808377	1001.6022	1.7646	0.00088547	-3.0814	-0.0015463	-1.3169	-0.00066082	501.80630235595396	46.027	0.43906	47.403	47.116	47.555	1.3751	-0.050172	7.7763E-06	NaN	48.346	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1111400			35674	1059	17626	17704							0.10146343439464545
VAARAVRPRSL	11	Unmodified	_VAARAVRPRSL_					0	0	0		ENST00000496856.5_1_3:179040816-179046072:+|nuORF	ENST00000496856.5_1_3:179040816-179046072:+|nuORF	ENST00000496856.5_1_3:179040816-179046072:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2507202029228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.46	1	117.5	117	118	0.041039								0	0	0	0.63775	1	50475	50475		0.094841	0	1				35675	6958	17627	17705	41735	41735					0.14134698402403956
VAASPHKDSV	10	Unmodified	_VAASPHKDSV_					0	0	0		nc|ENSG00000116455|Q9BQA1-2|WDR77;ENSG00000116455|ENST00000235090|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	nc|ENSG00000116455|Q9BQA1-2|WDR77	MSMS	GG20161007_CRH_Patient100_A02_02	2	505.7674133181572	2	505.766906	1009.51926	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.405	1	67.727	67.227	68.227	0.32269								0	0	0	0.65703	1	28221	28221		7.9102	1.5561	1				35676	1968	17628	17706	41736	41736					0.014879819208090339
VAASVIGG	8	Unmodified	_VAASVIGG_					0	0	0			REV__tr|A0A7D7A3B0|A0A7D7A3B0_9CLOTFAD-dependentproteinC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20990PE=4SV=1	REV__tr|A0A7D7A3B0|A0A7D7A3B0_9CLOTFAD-dependentproteinC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1973449587822	2	337.197596	672.38064	-2.8076	-0.00094673	2.3784	0.00080198	-0.42929	-0.00014475	337.1984100059566	14.427	1.0174	14.427	13.825	14.843	0					74	32	3	0	0	0	0.86202	1	5940	5940		15.768	0	1	3939400	+		35677	15862	17629	17707	41737	41737					0.03134483743144756
VAATDNVLL	9	Unmodified	_VAATDNVLL_					0	0	0			REV__nc|ENSG00000239474|O60662-2|KLHL41	REV__nc|ENSG00000239474|O60662-2|KLHL41	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	458.2643310427666	2	458.260925	914.507297	3.568	0.0016351	1.266	0.00058017	4.8341	0.0022153	458.2611050683286	86.398	0.54626	87.525	87.147	87.694	1.1265					49	21	3	0	0	0	0.64949	1	36427	36427		9.3474	0	1	68529000	+		35678	11912	17630	17708	41738	41738					0.04662365177614447
VAAVAFPR	8	Unmodified	_VAAVAFPR_					0	0	0			REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	830.4871093630791	1	830.488299	829.481023	1.9749	0.0016401	-1.947	-0.001617	0.027899	2.317E-05	830.4873243893528	58.728	0.30195	60.697	60.574	60.876	1.969					15	9	2	0	0	0	0.84707	1	24669	24669		17.087	0	1	888330	+		35679	9466	17631	17709	41739	41739					0.05946140796800137
VAAVAFPR	8	Unmodified	_VAAVAFPR_					0	0	0			REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	830.488299	829.481023	2.2003	0.0018273	-1.0468	-0.00086933	1.1535	0.00095799	830.4879695994825	59.213	0.30231	60.633	60.497	60.8	1.4196	-0.032306	0.00024694	NaN	17.087	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1282900	+		35680	9466	17631	17709							0.05946140796800137
VAAVAFPR	8	Unmodified	_VAAVAFPR_					0	0	0			REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	REV__nc|ENSG00000116120|Q9NSD9-2|FARSB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	830.488299	829.481023	1.9749	0.0016401	-1.947	-0.001617	0.027899	2.317E-05	830.4873243893528	58.728	0.30195	60.697	60.574	60.876	1.969	0.032306	-0.00050069	NaN	17.087	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	888330	+		35681	9466	17631	17709							0.05946140796800137
VAAVGPYIQV	10	Unmodified	_VAAVGPYIQV_					0	0	0		ENSG00000088808|ENST00000202556|PPP1R13B	ENSG00000088808|ENST00000202556|PPP1R13B	ENSG00000088808|ENST00000202556|PPP1R13B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7927429080009	2	508.792392	1015.57023	2.9232	0.0014873	-4.3139	-0.0021949	-1.3907	-0.00070759	508.7902767634398	71.064	0.29948	72.405	72.271	72.571	1.3415					24	9	3	0	0	0	0.45153	1	29827	29827		30.225	0	1	6084400			35682	1108	17632	17710	41740	41740					0.06306930965649826
VAAVGPYIQV	10	Unmodified	_VAAVGPYIQV_					0	0	0		ENSG00000088808|ENST00000202556|PPP1R13B	ENSG00000088808|ENST00000202556|PPP1R13B	ENSG00000088808|ENST00000202556|PPP1R13B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	508.7357055544853	2	508.792392	1015.57023	1.3904	0.00070742	-3.2362	-0.0016466	-1.8458	-0.00093913	508.7907788164178	70.609	0.36218	72.447	72.291	72.653	1.8378					26	11	3	0	0	0	0.12381	1	29653	29653		16.942	4.4107	1	4282800			35683	1108	17632	17710	41741	41741					0.06306930965649826
VADEAEALVL	10	Unmodified	_VADEAEALVL_					0	0	0		ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	ENST00000475185.5_1_18:20877516-20877840:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2697631716728	2	515.276772	1028.53899	1.2504	0.0006443	-3.1234	-0.0016094	-1.873	-0.0009651	515.275540992107	56.492	0.72572	58.461	58.149	58.874	1.9684					90	23	6	0	0	0	0.62746	1	23830	23830		21.747	1.293	1	275520000			35684	6779	17633	17711	41742	41742					0.02586313140909624
VADEFLVLN	9	Unmodified	_VADEFLVLN_					0	0	0			REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1019.54307860136	1	1019.54079	1018.53351	2.0432	0.0020831	-0.76928	-0.00078432	1.2739	0.0012988	1019.5399788111677	78.952	0.45789	79.261	79.078	79.536	0.30933					40	14	4	0	0	0	0.076627	1	33078	33078		57.471	0	1	6895800	+		35685	8449	17634	17712	41743	41743					0.024986343490809304
VADEFLVLN	9	Unmodified	_VADEFLVLN_					0	0	0			REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.2747680544853	2	510.274032	1018.53351	2.8738	0.0014664	-0.9084	-0.00046354	1.9654	0.0010029	510.2734382073758	78.082	0.97401	79.363	78.95	79.924	1.2809					118	31	6	0	0	0	0.031324	1	32852	32852		85.357	0	1	144930000	+		35686	8449	17634	17712	41744	41744					0.024986343490809304
VADEFLVLN	9	Unmodified	_VADEFLVLN_					0	0	0			REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	REV__ENST00000586052.5_1_17:76450753-76471822:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.2742187380791	2	510.274032	1018.53351	1.618	0.00082562	-1.1327	-0.00057798	0.48531	0.00024764	510.2732537599685	77.615	1.1719	79.366	79.041	80.213	1.7514					104	37	5	0	0	0	0.031324	3	32524	32524;32576;32629		85.357	0	1	122010000	+		35687	8449	17634	17712	41745;41746;41747	41745					0.024986343490809304
VADFIKEGV	9	Unmodified	_VADFIKEGV_					0	0	0		tr|A0A7D7A5P2|A0A7D7A5P2_9CLOTMethionineaminopeptidaseOS=ClostridiumintestinaleOX=36845GN=mapPE=3SV=1	tr|A0A7D7A5P2|A0A7D7A5P2_9CLOTMethionineaminopeptidaseOS=ClostridiumintestinaleOX=36845GN=mapPE=3SV=1	tr|A0A7D7A5P2|A0A7D7A5P2_9CLOTMethionineaminopeptidaseOS=ClostridiumintestinaleOX=36845GN=mapPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.2706481814384	2	489.26875	976.522947	2.0959	0.0010254	0.68297	0.00033415	2.7788	0.0013596	489.2689977110557	40.953	0.38236	42.845	42.641	43.024	1.8927					33	11	4	0	0	0	0.59203	1	17229	17229		11.64	3.047	1	7475500			35688	17300	17635	17713	41748	41748					0.03374651694673503
VADMLVSMSS	10	Unmodified	_VADMLVSMSS_					0	0	0		ENSG00000176136|ENST00000589410|MC5R	ENSG00000176136|ENST00000589410|MC5R	ENSG00000176136|ENST00000589410|MC5R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	346.8324462771416	3	347.164799	1038.47257	1.3517	0.00046927	1.0297	0.00035746	2.3814	0.00082674	347.1666907784254	75.37	0.67452	76.677	76.435	77.11	1.3063					37	21	3	0	0	0	0.12551	1	31781	31781		3.3196	0	1	1160100			35689	4395	17636	17714	41749	41749					-0.04512962016997335
VADNSSRPPD	10	Unmodified	_VADNSSRPPD_					0	0	0			REV__ENSG00000227051|ENST00000555004|C14orf132	REV__ENSG00000227051|ENST00000555004|C14orf132	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2488891482353	2	529.249077	1056.4836	1.8361	0.00097176	-1.5934	-0.00084329	0.24273	0.00012847	529.248390571443	78.989	0.36446	79.299	79.078	79.443	0.30932					22	11	3	0	0	0	0.48563	1	33015	33015		32.786	7.3864	1	1681300	+		35690	11896	17637	17715	41750	41750					-0.04238100326847416
VADPYVVIM	9	Unmodified	_VADPYVVIM_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7688171267509	2	503.767529	1005.5205	3.113	0.0015682	-1.6847	-0.00084871	1.4282	0.0007195	503.7670231785091	64.252	0.36692	65.659	65.466	65.833	1.4071					24	11	3	0	0	0	0.24063	1	26954	26954		28.487	9.0478	1	2768000			35691	874	17638	17716	41751	41751					0.01796479965355502
VADPYVVIM	9	Unmodified	_VADPYVVIM_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.529772937298	1	1006.52778	1005.5205	3.1282	0.0031486	-0.13803	-0.00013893	2.9901	0.0030096	1006.5272098632297	64.288	0.39881	65.695	65.466	65.865	1.4071					31	12	3	0	0	0	0.076627	1	26959	26959		57.471	23.369	1	4297700			35692	874	17638	17716	41752	41752					0.01796479965355502
VADPYVVIM	9	Unmodified	_VADPYVVIM_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1006.530749499798	1	1006.52778	1005.5205	3.1051	0.0031254	-0.831	-0.00083643	2.2741	0.0022889	1006.5273216689791	63.802	0.39943	65.73	65.489	65.888	1.928					29	12	3	0	0	0	0.076627	2	26784	26737;26784		57.471	25.166	1	3032900			35693	874	17638	17716	41753;41754	41754					0.01796479965355502
VADPYVVIM	9	Unmodified	_VADPYVVIM_					0	0	0		ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7677184939384	2	503.767529	1005.5205	2.7757	0.0013983	-2.1127	-0.0010643	0.66296	0.00033398	503.7664558372152	63.835	0.43063	65.763	65.489	65.919	1.928					25	13	3	0	0	0	0.11478	1	26762	26762		44.407	21.259	1	1871600			35694	874	17638	17716	41755	41755					0.01796479965355502
VADVVIKF	8	Unmodified	_VADVVIKF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1206237673759	2	445.770929	889.527304	2.4496	0.001092	0.08577	3.8234E-05	2.5354	0.0011302	445.77078953864554	47.775	0.3132	49.157	48.922	49.235	1.3825					13	9	2	0	0	0	2.3239	1	19990	19990		18.135	8.7875	1	947080			35695	2045	17639	17717	41756	41756					0.07812160908224541
VADVVIKF	8	Unmodified	_VADVVIKF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1206848025322	2	445.770929	889.527304	2.6379	0.0011759	-1.6187	-0.00072158	1.0192	0.00045432	445.7702794545753	47.165	0.24805	49.141	49.063	49.311	1.976					13	7	2	0	0	0	2.3239	1	19757	19757		4.756	0	1	949050			35696	2045	17639	17717	41757	41757					0.07812160908224541
VAEKLPAV	8	Unmodified	_VAEKLPAV_					0	0	0			REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	REV__nc|ENSG00000114796|Q6TFL4-2|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.7559081912041	2	413.755278	825.496004	2.4665	0.0010205	-3.8842	-0.0016071	-1.4177	-0.00058657	413.7542422584225	82.745	0.48827	83.016	82.756	83.244	0.27029					25	15	2	0	0	0	0.88504	1	34563	34563		5.7604	0	1	1970700	+		35697	9418	17640	17718	41758	41758					0.07627587874128494
VAELRDHE	8	Unmodified	_VAELRDHE_					0	0	0		ENST00000569143.1_1_16:777475-778030:+|nuORF	ENST00000569143.1_1_16:777475-778030:+|nuORF	ENST00000569143.1_1_16:777475-778030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7437927126884	2	484.743431	967.472308	0.53852	0.00026105	-0.29	-0.00014058	0.24852	0.00012047	484.7435317598103	25.072	0.27159	26.788	26.635	26.907	1.7167					19	8	3	0	0	0	0.89176	1	10464	10464		0.79363	0	1	1387400			35698	7377	17641	17719	41759	41759					-0.012728776303447376
VAELSPLP	8	Unmodified	_VAELSPLP_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2386657595634	2	413.239461	824.46437	0.46811	0.00019344	-1.8595	-0.00076842	-1.3914	-0.00057498	413.2387038087496	71.107	0.71988	71.107	70.537	71.257	0					45	22	3	0	0	0	0.89008	1	29570	29570		2.5775	0	1	2872700	+		35699	9995	17642	17720	41760	41760					0.04511595120175116
VAELSPLP	8	Unmodified	_VAELSPLP_					0	0	0			REV__ENSG00000136854|ENST00000373299|STXBP1	REV__ENSG00000136854|ENST00000373299|STXBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2387878298759	2	413.239461	824.46437	1.6241	0.00067113	-2.5527	-0.0010549	-0.9286	-0.00038373	413.23842786861155	70.834	0.716	71.157	70.62	71.336	0.32359					44	22	3	0	0	0	0.89008	1	29619	29619		2.5775	0	1	2109300	+		35700	9995	17642	17720	41761	41761					0.04511595120175116
VAEQFSRAFK	10	Unmodified	_VAEQFSRAFK_					0	0	0		ENST00000495343.5_1_21:44151932-44153535:+|nuORF;ENST00000467162.5_1_21:44106337-44153535:+|nuORF;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-6|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8159057497978	2	591.81693	1181.61931	0.48785	0.00028872	-2.3918	-0.0014155	-1.9039	-0.0011268	591.8153361084461	17.214	0.3426	18.112	17.963	18.305	0.89794					27	11	3	0	0	0	0.70618	1	7183	7183		18.146	4.2403	1	1801400			35701	3544	17643	17721	41762	41762					0.03576219254614443
VAEQFSRAFK	10	Unmodified	_VAEQFSRAFK_					0	0	0		ENST00000495343.5_1_21:44151932-44153535:+|nuORF;ENST00000467162.5_1_21:44106337-44153535:+|nuORF;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-6|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.8150512576103	2	591.81693	1181.61931	0.33361	0.00019743	-2.8309	-0.0016754	-2.4973	-0.0014779	591.8150790232851	16.997	0.3602	18.3	18.112	18.472	1.3023					27	11	4	0	0	0	0.44465	1	7047	7047		30.637	7.9003	1	3242800			35702	3544	17643	17721	41763	41763					0.03576219254614443
VAEQFSRAFK	10	Unmodified	_VAEQFSRAFK_					0	0	0		ENST00000495343.5_1_21:44151932-44153535:+|nuORF;ENST00000467162.5_1_21:44106337-44153535:+|nuORF;nc|ENSG00000160191|O76083-3|PDE9A;nc|ENSG00000160191|O76083-16|PDE9A;ENST00000470987.5_1_21:44117526-44195400:+|nuORF;nc|ENSG00000160191|O76083-6|PDE9A;nc|ENSG00000160191|O76083-8|PDE9A;nc|ENSG00000160191|O76083-13|PDE9A;nc|ENSG00000160191|O76083-2|PDE9A;nc|ENSG00000160191|O76083-14|PDE9A;nc|ENSG00000160191|O76083-15|PDE9A;ENSG00000160191|ENST00000291539|PDE9A	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	ENST00000495343.5_1_21:44151932-44153535:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	591.81693	1181.61931	0.36437	0.00021564	-1.7023	-0.0010075	-1.338	-0.00079183	591.8159252544109	17.948	0.25046	18.12	17.984	18.234	0.17285	-0.056894	0.00070987	NaN	30.637	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781030			35703	3544	17643	17721							0.03576219254614443
VAETHIVLL	9	Unmodified	_VAETHIVLL_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8007995486259	2	497.800217	993.585882	1.2415	0.00061803	-0.11723	-5.8359E-05	1.1243	0.00055967	497.80018963142817	46.141	0.21513	48.111	48.003	48.219	1.9703					11	6	2	0	0	0	0.24063	1	19340	19340		28.487	0.31361	1	593990			35704	1382	17644	17722	41764	41764					0.0888321748270755
VAETHIVLL	9	Unmodified	_VAETHIVLL_					0	0	0		ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	ENSG00000102158|ENST00000618282|MAGT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	497.800217	993.585882	1.8237	0.00090783	0.84765	0.00042196	2.6713	0.0013298	497.80112315481387	46.61	0.22148	47.985	47.893	48.115	1.3751	-0.06287	0.00056652	NaN	28.487	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431640			35705	1382	17644	17722							0.0888321748270755
VAEVTLIVS	9	Unmodified	_VAEVTLIVS_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.5535156130791	1	930.550625	929.543348	2.1364	0.001988	-1.5829	-0.0014729	0.55354	0.00051509	930.5494970189022	83.038	0.39733	83.038	82.861	83.258	0					19	12	2	0	0	0	0.076627	1	34613	34613		57.471	3.8958	1	1562400	+		35706	10496;14466	17645	17723	41765	41765					0.07575822354488082
VAEVTLIVS	9	Unmodified	_VAEVTLIVS_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	930.5514404177666	1	930.550625	929.543348	2.2793	0.002121	-0.56294	-0.00052384	1.7163	0.0015971	930.5494549792984	82.591	0.33469	82.871	82.704	83.039	0.2802					19	10	2	0	0	0	0.076627	1	34542	34542		57.471	0	1	2034300	+		35707	10496;14466	17645	17723	41766	41766					0.07575822354488082
VAEVTLIVS	9	Unmodified	_VAEVTLIVS_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN;REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	930.5535156130791	1	930.550625	929.543348	3.8443	0.0035773	-1.2648	-0.001177	2.5794	0.0024003	930.5491477103212	81.667	0.5883	82.9	82.687	83.275	1.2332					32	18	3	0	0	0	0.19075	1	34338	34338		34.102	0	1	5227300	+		35708	10496;14466	17645	17723	41767	41767					0.07575822354488082
VAEWPSIRPQ	10	Unmodified	_VAEWPSIRPQ_					0	0	0			REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	591.8161498904228	2	591.81693	1181.61931	0.36437	0.00021564	-1.7023	-0.0010075	-1.338	-0.00079183	591.8159252544109	17.948	0.25046	18.12	17.984	18.234	0.17285					16	7	3	0	0	0	0.82019	1	7470	7470		10.074	1.3285	1	781030	+		35709	14462	17646	17724	41768	41768					0.03576219254614443
VAEWPSIRPQ	10	Unmodified	_VAEWPSIRPQ_					0	0	0			REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	REV__nc|ENSG00000153443|Q8TB05-2|UBALD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.8166992068291	2	591.81693	1181.61931	0.48785	0.00028872	-2.3918	-0.0014155	-1.9039	-0.0011268	591.8153361084461	17.214	0.3426	18.112	17.963	18.305	0.89794					27	11	3	0	0	0	0.82019	1	7142	7142		10.074	0.6908	1	1801400	+		35710	14462	17646	17724	41769	41769					0.03576219254614443
VAFAIIGAGL	10	Unmodified	_VAFAIIGAGL_					0	0	0			REV__tr|A0A7D7A3W2|A0A7D7A3W2_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_23170PE=4SV=1	REV__tr|A0A7D7A3W2|A0A7D7A3W2_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_23170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.2851135134697	2	466.284203	930.553853	1.9276	0.00089881	0.22893	0.00010675	2.1565	0.0010056	466.2844896633628	42.652	0.59856	43.992	43.732	44.331	1.3399					33	18	2	0	0	0	0.28071	3	17871	17871;17919;17968		40.449	7.6629	1	1791600	+		35711	15784	17647	17725	41770;41771;41772	41770					0.08579849799559724
VAFAIIGAGL	10	Unmodified	_VAFAIIGAGL_					0	0	0			REV__tr|A0A7D7A3W2|A0A7D7A3W2_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_23170PE=4SV=1	REV__tr|A0A7D7A3W2|A0A7D7A3W2_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_23170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.2842895388603	2	466.284203	930.553853	1.9998	0.00093249	-0.59247	-0.00027626	1.4074	0.00065623	466.2841376687311	42.075	0.49457	43.996	43.795	44.29	1.9211					25	15	2	0	0	0	0.28071	2	17705	17653;17705		40.449	8.3316	1	2137600	+		35712	15784	17647	17725	41773;41774	41774					0.08579849799559724
VAFDSLTWL	9	Unmodified	_VAFDSLTWL_					0	0	0			REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	REV__nc|ENSG00000160796|Q6ZNJ1-2|NBEAL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.2773925662041	2	526.276575	1050.5386	2.7411	0.0014426	0.025252	1.3289E-05	2.7664	0.0014559	526.2765747100233	85.924	0.33555	86.176	86.006	86.341	0.25227					16	10	2	0	0	0	0.64949	1	35979	35979		9.3474	0	1	1313900	+		35713	10613	17648	17726	41775	41775					0.015349382117165078
VAFGIGAEL	9	Unmodified	_VAFGIGAEL_					0	0	0			REV__tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	REV__tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	876.4797241091728	1	876.482545	875.475269	0.80171	0.00070269	0.15335	0.00013441	0.95506	0.0008371	876.4828635975871	58.039	0.4296	60.008	59.784	60.214	1.969					30	13	3	0	0	0	0.070759	1	24307	24307		59.795	0	1	14819000	+		35714	14965	17649	17727	41776	41776					0.032549974944686255
VAFPKSLVA	9	Unmodified	_VAFPKSLVA_					0	0	0		MGA|p.D2061Vfs*3|1|0.09|ENSG00000174197|chr15:41749788-41749789|-/T|frameshift_variant;MGA|p.D2295Tfs*40|1|0.55|ENSG00000174197|chr15:41750489-41750489|T/-|frameshift_variant;nc|ENSG00000174197|Q8IWI9|MGA;ENSG00000174197|ENST00000703841|MGA	MGA|p.D2061Vfs*3|1|0.09|ENSG00000174197|chr15:41749788-41749789|-/T|frameshift_variant	MGA|p.D2061Vfs*3|1|0.09|ENSG00000174197|chr15:41749788-41749789|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	466.2856017947197	2	466.284203	930.553853	1.9998	0.00093249	-0.59247	-0.00027626	1.4074	0.00065623	466.2841376687311	42.075	0.49457	43.996	43.795	44.29	1.9211					25	15	2	0	0	0	0.20244	1	17600	17600		32.786	0.66872	1	2137600			35715	4320	17650	17728	41777	41777					0.08579849799559724
VAFPLALV	8	Unmodified	_VAFPLALV_					0	0	0		ENSG00000142227|ENST00000270221|EMP3	ENSG00000142227|ENST00000270221|EMP3	ENSG00000142227|ENST00000270221|EMP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2632629275322	2	415.262739	828.510926	1.2268	0.00050946	-0.087868	-3.6488E-05	1.139	0.00047297	415.26255053272064	89.824	0.79404	89.824	89.588	90.382	0					49	24	3	0	0	0	0.88958	1	37547	37547		2.8892	0	1	4106800			35716	2991	17651	17729	41778	41778					0.08981079742125075
VAFPTEIKV	9	Unmodified	_VAFPTEIKV_					0	0	0		ENSG00000136197|ENST00000350427|C7orf25;nc|nan|Q9BPX7-2|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2949706912041	2	502.294768	1002.57498	1.0283	0.00051652	-2.4011	-0.0012061	-1.3728	-0.00068956	502.2946219622654	50.951	0.45061	52.345	52.139	52.589	1.3938					45	14	4	0	0	0	0.029061	3	21341	21294;21341;21392		88.954	45.096	1	46504000			35717	2710	17652	17730	41779;41780;41781	41780					0.07379815108413368
VAFPTEIKV	9	Unmodified	_VAFPTEIKV_					0	0	0		ENSG00000136197|ENST00000350427|C7orf25;nc|nan|Q9BPX7-2|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	ENSG00000136197|ENST00000350427|C7orf25	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.2941467165947	2	502.294768	1002.57498	0.84248	0.00042317	-3.5197	-0.0017679	-2.6772	-0.0013448	502.29406667492094	50.419	0.38936	52.394	52.157	52.546	1.9753					44	12	4	0	0	0	0.033102	2	21118	21077;21118		82.529	34.87	1	44080000			35718	2710	17652	17730	41782;41783	41783					0.07379815108413368
VAFSEIMSM	9	Unmodified	_VAFSEIMSM_					0	0	0		ENST00000495155.5_1_17:19186396-19216987:+|nuORF;nc|ENSG00000072134|O95208-3|EPN2;nc|ENSG00000063245|Q9Y6I3-3|EPN1;ENSG00000063245|ENST00000270460|EPN1;nc|ENSG00000072134|O95208-2|EPN2;ENSG00000072134|ENST00000314728|EPN2;nc|ENSG00000063245|Q9Y6I3-1|EPN1	ENST00000495155.5_1_17:19186396-19216987:+|nuORF	ENST00000495155.5_1_17:19186396-19216987:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.7361022830009	2	507.735371	1013.45619	2.576	0.0013079	-1.5654	-0.00079481	1.0106	0.00051311	507.73458006266213	70.02	0.41698	71.858	71.687	72.104	1.8378					26	12	3	0	0	0	0.11478	2	29361	29361;29409		44.407	19.733	1	1825400			35719	763	17653	17731	41784;41785	41784					-0.050000431830994785
VAFWNSVTW	9	Unmodified	_VAFWNSVTW_					0	0	0		ENST00000517448.5_1_5:154210261-154230090:-|nuORF;ENST00000423554.5_1_5:154202945-154230090:-|nuORF;nc|ENSG00000170271|Q96IV6-2|FAXDC2;ENSG00000170271|ENST00000326080|FAXDC2	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2750121951103	2	555.274367	1108.53418	3.4325	0.001906	-2.4959	-0.0013859	0.93664	0.00052009	555.273307842635	81.593	0.5253	82.827	82.564	83.089	1.2332					40	16	3	0	0	0	0.076627	3	34230	34186;34230;34275		57.471	32.797	1	4246200			35720	4136	17654	17732	41786;41787;41788	41787					-0.015745262111977354
VAFWNSVTW	9	Unmodified	_VAFWNSVTW_					0	0	0		ENST00000517448.5_1_5:154210261-154230090:-|nuORF;ENST00000423554.5_1_5:154202945-154230090:-|nuORF;nc|ENSG00000170271|Q96IV6-2|FAXDC2;ENSG00000170271|ENST00000326080|FAXDC2	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	ENST00000517448.5_1_5:154210261-154230090:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2756835818291	2	555.274367	1108.53418	2.9128	0.0016174	-1.1047	-0.00061343	1.8081	0.001004	555.273754729079	81.13	0.43377	82.826	82.61	83.043	1.6959					32	13	3	0	0	0	0.061246	2	34049	34000;34049		63.563	38.889	1	4505700			35721	4136	17654	17732	41789;41790	41790					-0.015745262111977354
VAGAALLLV	9	Unmodified	_VAGAALLLV_					0	0	0		ENSG00000090932|ENST00000356433|DLL3;nc|ENSG00000090932|Q9NYJ7|DLL3	ENSG00000090932|ENST00000356433|DLL3	ENSG00000090932|ENST00000356433|DLL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	826.5400878787041	1	826.539666	825.53239	2.3616	0.001952	-0.29622	-0.00024484	2.0654	0.0017071	826.5397878760452	79.965	0.46371	81.216	80.987	81.45	1.2512					28	14	3	0	0	0	0.11074	1	33522	33522		45.75	0	1	4781900			35722	1144	17655	17733	41791	41791					0.11264464770840732
VAGAALLLV	9	Unmodified	_VAGAALLLV_					0	0	0		ENSG00000090932|ENST00000356433|DLL3;nc|ENSG00000090932|Q9NYJ7|DLL3	ENSG00000090932|ENST00000356433|DLL3	ENSG00000090932|ENST00000356433|DLL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	826.5414916872978	1	826.539666	825.53239	1.4004	0.0011575	-0.17785	-0.000147	1.2225	0.0010105	826.539561654603	79.444	0.49141	81.161	80.921	81.413	1.7167					32	15	3	0	0	0	0.11074	1	33283	33283		45.75	0	1	3898500			35723	1144	17655	17733	41792	41792					0.11264464770840732
VAGKGRIG	8	Unmodified	_VAGKGRIG_					0	0	0			REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF	REV__ENST00000492809.5_1_3:51992079-51994784:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.4695922732353	1	757.467898	756.460622	2.4932	0.0018885	1.1618	0.00088003	3.655	0.0027685	757.4686169404013	108.32	0.28435	108.47	108.29	108.57	0.15781					31	17	3	0	0	0	0.89178	1	46755	46755		0.69038	0	1	51330000	+		35724	13442	17656	17734	41793	41793					0.07264970136998272
VAGMDEWHQ	9	Unmodified	_VAGMDEWHQ_					0	0	0			REV__ENST00000588435.1_1_18:14106276-14132276:-|nuORF	REV__ENST00000588435.1_1_18:14106276-14132276:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.7301513552666	2	536.729466	1071.44438	1.7572	0.00094312	0.33297	0.00017872	2.0901	0.0011218	536.729726025217	78.994	0.52076	79.303	79.078	79.599	0.30933					67	16	7	0	0	0	0.82604	1	33079	33079		2.3027	0	1	9325700	+		35725	14046	17657	17735	41794	41794					-0.08848523882079462
VAGRPVLS	8	Unmodified	_VAGRPVLS_					0	0	0		ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7461730837822	2	399.745245	797.475937	2.8414	0.0011358	-0.33955	-0.00013573	2.5018	0.0010001	399.7451099399882	104.48	0.089691	104.54	104.5	104.59	0.056801					10	4	3	0	0	0	0.89008	1	44079	44079		2.5775	0	1	29449000			35726	1089	17658	17736	41795	41795					0.06909836934175928
VAGRPVLS	8	Unmodified	_VAGRPVLS_					0	0	0		ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	399.745245	797.475937	-0.31655	-0.00012654	4.6372	0.0018537	4.3207	0.0017272	399.7463746364464	104.52	0.089874	104.52	104.46	104.54	0	-0.052032	0.0034975	NaN	2.5775	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16741000			35727	1089	17658	17736							0.06909836934175928
VAGRPVLS	8	Unmodified	_VAGRPVLS_					0	0	0		ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	399.745245	797.475937	2.7003	0.0010794	0.64533	0.00025797	3.3456	0.0013374	399.745264843024	104.47	0.093407	104.63	104.56	104.66	0.16055	0.059466	0.00030596	NaN	2.5775	11	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59707000			35728	1089	17658	17736							0.06909836934175928
VAGRPVLS	8	Unmodified	_VAGRPVLS_					0	0	0		ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	ENSG00000087303|ENST00000216286|NID2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	399.745245	797.475937	3.1037	0.0012407	0.16132	6.4487E-05	3.265	0.0013052	399.74496549398833	104.42	0.21142	104.59	104.49	104.7	0.1731	0.021219	-8.1001E-05	NaN	2.5775	19	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53833000			35729	1089	17658	17736							0.06909836934175928
VAGRTYPIL	9	Unmodified	_VAGRTYPIL_					0	0	0			REV__tr|A0A7D6VYL8|A0A7D6VYL8_9CLOTtRNA(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferaseOS=ClostridiumintestinaleOX=36845GN=mtaBPE=4SV=1	REV__tr|A0A7D6VYL8|A0A7D6VYL8_9CLOTtRNA(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferaseOS=ClostridiumintestinaleOX=36845GN=mtaBPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2910339236259	2	495.292559	988.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.691	1	83.962	83.462	84.462	0.27029								0	0	0	0.42693	1	35002	35002		4.3292	0	1		+		35730	15562	17659	17737	41796	41796					0.07582350685515848
VAGRVIVE	8	Unmodified	_VAGRVIVE_					0	0	0		TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant;ENSG00000265972|ENST00000582401|TXNIP	TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant	TXNIP|p.E165Rfs*11|1|0.2|ENSG00000265972|chr1:145995010-145995011|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7597534060478	2	421.758352	841.502152	3.0402	0.0012822	-0.69812	-0.00029444	2.3421	0.00098781	421.75828350993015	104.5	0.089691	104.56	104.5	104.59	0.056801					10	4	3	0	0	0	0.89008	1	44082	44082		2.5775	0	1	23987000			35731	17348	17660	17738	41797	41797					0.07506106105654453
VAGTVLFVTV	10	Unmodified	_VAGTVLFVTV_					0	0	0			REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	503.7742797732353	2	503.302593	1004.59063	1.6501	0.00083051	-1.9707	-0.00099188	-0.32062	-0.00016137	503.3010494123437	70.956	0.38166	70.956	70.78	71.161	0					18	11	2	0	0	0	0.12519	1	29510	29510		7.2892	1.5288	1	1206800	+		35732	10450	17661	17739	41798	41798					0.08852101625461728
VAGTVLFVTV	10	Unmodified	_VAGTVLFVTV_					0	0	0			REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	503.302593	1004.59063	2.2653	0.0011401	-0.17604	-8.8602E-05	2.0893	0.0010515	503.30274523392967	69.369	0.46684	70.735	70.472	70.939	1.3657	-0.052131	-2.1897E-05	NaN	7.2892	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3206800	+		35733	10450	17661	17739							0.08852101625461728
VAGTVLFVTV	10	Unmodified	_VAGTVLFVTV_					0	0	0			REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	REV__OR14K1|p.L270Sfs*15|1|0.04|ENSG00000153230|chr1:247739420-247739421|-/TT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	503.302593	1004.59063	1.229	0.00061857	1.1939	0.00060091	2.423	0.0012195	503.3035542813234	68.817	0.67	70.67	70.217	70.887	1.853	-0.11702	0.0013571	NaN	7.2892	36	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3440800	+		35734	10450	17661	17739							0.08852101625461728
VAGVVAGIV	9	Unmodified	_VAGVVAGIV_					0	0	0		nc|ENSG00000150093|P05556-2|ITGB1;ENSG00000150093|ENST00000302278|ITGB1;nc|ENSG00000150093|P05556-5|ITGB1;ITGB1-SEPT2|1|fusion;nc|ENSG00000150093|P05556-4|ITGB1;nc|ENSG00000150093|P05556-3|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	nc|ENSG00000150093|P05556-2|ITGB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	784.4913207888603	1	784.492716	783.485439	0.14044	0.00011017	-0.29832	-0.00023403	-0.15788	-0.00012385	784.4927343326806	50.565	0.27259	52.54	52.454	52.727	1.9753					11	8	2	0	0	0	0.16975	1	21215	21215		36.466	0	1	577320			35735	3263	17662	17740	41799	41799					0.08503605219698329
VAGYVSGLFL	10	Unmodified	_VAGYVSGLFL_					0	0	0		ENSG00000115665|ENST00000264047|SLC5A7	ENSG00000115665|ENST00000264047|SLC5A7	ENSG00000115665|ENST00000264047|SLC5A7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2880737185478	2	513.286943	1024.55933	2.3511	0.0012068	0.86642	0.00044472	3.2175	0.0016515	513.2873462737851	60.481	0.7282	60.809	60.568	61.296	0.32809					60	22	4	0	0	0	0.65574	1	25495	25495		20.454	4.6064	1	33109000			35736	1931	17663	17741	41800	41800					0.04803528591378381
VAHFHPTTKL	10	Unmodified	_VAHFHPTTKL_					0	0	0		ENST00000344120.4_1_5:141690156-141690324:-|nuORF	ENST00000344120.4_1_5:141690156-141690324:-|nuORF	ENST00000344120.4_1_5:141690156-141690324:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8205444216728	2	575.822015	1149.62948	0.6423	0.00036985	-2.1741	-0.0012519	-1.5318	-0.00088203	575.8203650014195	18.717	0.30655	18.717	18.584	18.891	0					14	9	2	0	0	0	0.81324	1	7779	7779		10.824	0	1	680910			35737	5954	17664	17742	41801	41801					0.06064826979832105
VAHGEPTE	8	Unmodified	_VAHGEPTE_					0	0	0			REV__ENSG00000047315|ENST00000314595|POLR2B	REV__ENSG00000047315|ENST00000314595|POLR2B	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.1984435915947	2	420.198325	838.382096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.9	1	102.96	102.46	103.46	0.062805								0	0	0	1.0178	1	43116	43116		2.5775	0	1		+		35738	8607	17665	17743	41802	41802					-0.04355926958771761
VAHLGHLA	8	Unmodified	_VAHLGHLA_					0	0	0			REV__ENSG00000204439|ENST00000375911|C6orf47	REV__ENSG00000204439|ENST00000375911|C6orf47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	817.4703246951103	1	817.467898	816.460622	2.7657	0.0022608	-0.19446	-0.00015897	2.5712	0.0021019	817.4679572570769	107.85	0.16591	107.91	107.84	108.01	0.052452					24	8	4	0	0	0	0.89198	1	46248	46248		0	0	1	83663000	+		35739	11782	17666	17744	41803	41803					0.04504970136974862
VAHLGHLA	8	Unmodified	_VAHLGHLA_					0	0	0			REV__ENSG00000204439|ENST00000375911|C6orf47	REV__ENSG00000204439|ENST00000375911|C6orf47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	817.4736205935478	1	817.467898	816.460622	2.9521	0.0024132	-0.45892	-0.00037515	2.4932	0.0020381	817.4685527911655	107.84	0.12772	108	107.9	108.03	0.15795					14	6	3	0	0	0	0.89198	1	46415	46415		0	0	1	82322000	+		35740	11782	17666	17744	41804	41804					0.04504970136974862
VAHSGGAG	8	Unmodified	_VAHSGGAG_					0	0	0		ENSG00000186442|ENST00000417996|KRT3;CON__P12035	ENSG00000186442|ENST00000417996|KRT3	ENSG00000186442|ENST00000417996|KRT3	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1599914431572	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.314	1	16.232	15.732	16.732	0.91793								0	0	0	1.0178	1	6353	6353		0.79363	0	1			+	35741	347	17667	17745	41805	41805					-0.0324443061057309
VAHVLLPR	8	Unmodified	_VAHVLLPR_					0	0	0			REV__ENST00000393927.8_1_19:8575473-8576517:-|nuORF	REV__ENST00000393927.8_1_19:8575473-8576517:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1956970095634	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.169	1	14.938	14.438	15.438	0.76937								0	0	0	1.0178	1	5886	5886		1.6526	0	1		+		35742	12820	17668	17746	41806	41806					0.10978091613571905
VAIGDIKSEKL	11	Unmodified	_VAIGDIKSEKL_					0	0	0			REV__tr|A0A7D6VPK5|A0A7D6VPK5_9CLOTThiamine-phosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=thiEPE=3SV=1	REV__tr|A0A7D6VPK5|A0A7D6VPK5_9CLOTThiamine-phosphatesynthaseOS=ClostridiumintestinaleOX=36845GN=thiEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	391.5677673220634	3	391.567689	1171.68124	1.4803	0.00057963	-0.77831	-0.00030476	0.70196	0.00027487	391.5672765214219	39.596	0.42954	41.459	41.216	41.646	1.8624					36	13	4	0	0	0	0.2718	1	16624	16624		21.799	0	1	8977600	+		35743	15357	17669	17747	41807	41807					0.10226525883103932
VAIKQPIG	8	Unmodified	_VAIKQPIG_					0	0	0			REV__ENSG00000134871|ENST00000360467|COL4A2	REV__ENSG00000134871|ENST00000360467|COL4A2	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2649719119072	2	413.263271	824.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.761	1	82.041	81.541	82.541	0.2802								0	0	0	1.0178	1	34186	34186		0.69038	0	1		+		35744	9921	17670	17748	41808	41808					0.0927129411105625
VAINAVLSI	9	Unmodified	_VAINAVLSI_					0	0	0			REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	899.5581542849541	1	899.556044	898.548768	2.8667	0.0025788	-0.12398	-0.00011153	2.7428	0.0024673	899.5558530311823	61.081	0.402	62.501	62.314	62.716	1.4196					26	12	3	0	0	0	0.069258	1	25578	25578		60.39	0	1	2789600	+		35745	11678	17671	17749	41809	41809					0.09543545936958253
VAINAVLSI	9	Unmodified	_VAINAVLSI_					0	0	0			REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	899.5567504763603	1	899.556044	898.548768	3.1806	0.0028612	-0.58881	-0.00052967	2.5918	0.0023315	899.5551057543938	60.586	0.37378	62.551	62.356	62.729	1.9653					21	11	2	0	0	0	0.069258	2	25385	25385;25432		60.39	0	1	1733000	+		35746	11678	17671	17749	41810;41811	41810					0.09543545936958253
VAINAVLSI	9	Unmodified	_VAINAVLSI_					0	0	0			REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	REV__nc|ENSG00000197506|Q9HAS3-2|SLC28A3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	899.556044	898.548768	3.1806	0.0028612	-0.58881	-0.00052967	2.5918	0.0023315	899.5551057543938	60.586	0.37378	62.551	62.356	62.729	1.9653	0.025052	-0.00018056	NaN	60.39	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1733000	+		35747	11678	17671	17749							0.09543545936958253
VAINHIVDF	9	Unmodified	_VAINHIVDF_					0	0	0		ENST00000487998.5_1_10:92631743-92654759:+|nuORF;ENSG00000148688|ENST00000371703|RPP30;nc|ENSG00000148688|P78346-2|RPP30	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2828857302666	2	514.282192	1026.54983	0.92503	0.00047573	0.0039502	2.0315E-06	0.92898	0.00047776	514.2822129010888	51.273	0.46079	52.667	52.407	52.868	1.3938					37	14	3	0	0	0	0.0039211	3	21511	21409;21458;21511		126.57	48.417	1	21904000			35748	3218	17672	17750	41812;41813;41814	41814					0.03761760305860662
VAINHIVDF	9	Unmodified	_VAINHIVDF_					0	0	0		ENST00000487998.5_1_10:92631743-92654759:+|nuORF;ENSG00000148688|ENST00000371703|RPP30;nc|ENSG00000148688|P78346-2|RPP30	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	ENST00000487998.5_1_10:92631743-92654759:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2822143435478	2	514.282192	1026.54983	0.70988	0.00036508	0.2371	0.00012194	0.94699	0.00048702	514.2823077967412	50.646	0.48743	52.621	52.425	52.912	1.9753					37	15	3	0	0	0	0.0039211	3	21223	21177;21223;21274		139.14	50.235	1	24300000			35749	3218	17672	17750	41815;41816;41817	41816					0.03761760305860662
VAINLIVQH	9	Unmodified	_VAINLIVQH_					0	0	0		nc|ENSG00000130717|Q9HA47-3|UCK1;ENSG00000130717|ENST00000372215|UCK1;nc|ENSG00000130717|Q9HA47-4|UCK1;ENST00000491309.5_1_9:134400429-134401843:-|nuORF;ENST00000463772.5_1_1:165867222-165877057:+|nuORF;ENST00000479872.5_1_1:165872390-165877057:+|nuORF;nc|ENSG00000143179|Q9BZX2-2|UCK2;ENSG00000143179|ENST00000367879|UCK2	nc|ENSG00000130717|Q9HA47-3|UCK1	nc|ENSG00000130717|Q9HA47-3|UCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.3055297732353	2	503.805834	1005.59712	1.8509	0.0009325	-3.9339	-0.0019819	-2.083	-0.0010494	504.30431545265026	42.786	0.3779	44.126	43.953	44.331	1.3399					18	11	2	0	0	0	0.066815	1	17927	17927		61.357	23.383	1	1367400			35750	2454	17673	17751	41818	41818					0.09454039576860396
VAIRKLLQFV	10	Unmodified	_VAIRKLLQFV_					0	0	0			REV__tr|A0A7D6W335|A0A7D6W335_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08425PE=4SV=1	REV__tr|A0A7D6W335|A0A7D6W335_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08425PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2615844607353	3	396.260531	1185.75976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.081	1	95.081	94.581	95.581	0								0	0	0	0.66254	1	39736	39736		0.15932	0	1		+		35751	15608	17674	17752	41819	41819					0.1743142297882514
VAIVVGVV	8	Unmodified	_VAIVVGVV_					0	0	0			REV__ENSG00000106537|ENST00000262067|TSPAN13	REV__ENSG00000106537|ENST00000262067|TSPAN13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	755.5032226443291	1	755.502552	754.495276	1.1075	0.00083675	2.0446	0.0015447	3.1521	0.0023814	755.5046234137112	66.463	0.31752	68.352	68.15	68.467	1.8889					15	9	2	0	0	0	0.5848	1	27881	27881		41.817	0	1	790700	+		35752	9211	17675	17753	41820	41820					0.10820793225104808
VAKGEEELF	9	Unmodified	_VAKGEEELF_					0	0	0			REV__ENSG00000185875|ENST00000376356|THNSL1	REV__ENSG00000185875|ENST00000376356|THNSL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2656738162041	2	511.263665	1020.51278	2.8818	0.0014734	-0.92118	-0.00047097	1.9607	0.0010024	511.26286132594004	77.05	0.6629	78.331	77.844	78.507	1.2809					35	20	3	0	0	0	0.61249	1	32352	32352		10.824	0.64053	1	1456000	+		35753	11479	17676	17754	41821	41821					0.0033404396941705272
VAKKIAAV	8	Unmodified	_VAKKIAAV_					0	0	0		ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	ENSG00000137561|ENST00000260116|TTPA	MSMS	GG20161007_CRH_Patient100_W632_01	3	400.2732421755791	2	400.273638	798.532724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.132	1	99.329	98.829	99.829	0.19767								0	0	0	1.0178	1	41732	41732		2.8892	0	1				35754	2775	17677	17755	41822	41822					0.12539884490695385
VAKKNQLV	8	Unmodified	_VAKKNQLV_					0	0	0		ACACB|p.E1885Afs*17|1|0.03|ENSG00000076555|chr12:109247687-109247688|-/C|frameshift_variant;nc|ENSG00000076555|O00763-3|ACACB;ENSG00000076555|ENST00000338432|ACACB	ACACB|p.E1885Afs*17|1|0.03|ENSG00000076555|chr12:109247687-109247688|-/C|frameshift_variant	ACACB|p.E1885Afs*17|1|0.03|ENSG00000076555|chr12:109247687-109247688|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1890441775322	3	300.527277	898.560001	-2.0795	-0.00062495	-2.0963	-0.00062998	-4.1758	-0.0012549	300.5265811341891	53.532	1.8716	53.532	52.885	54.757	0					81	62	2	0	0	0	2.3239	1	22608	22608		6.7232	0	1	3143700			35755	13	17678	17756	41823	41823					0.10666368031093043
VAKQLKEKY	9	Unmodified	_VAKQLKEKY_					0	0	0			REV__ENSG00000112343|ENST00000357085|TRIM38	REV__ENSG00000112343|ENST00000357085|TRIM38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8289062380791	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.76456	1	29579	29579		4.756	0.42677	1	5931400	+		35756	9362	17679	17757	41824	41824					0.10094577919812764
VAKRTLGG	8	Unmodified	_VAKRTLGG_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	801.4962036013603	1	801.494113	800.486836	1.2804	0.0010263	0.93873	0.00075239	2.2192	0.0017786	801.4945853794148	107.9	0.20287	107.9	107.81	108.01	0					31	10	4	0	0	0	0.89198	2	46349	46349;46421		0	0	1	399560000			35757	7559	17680	17758	41825;41826	41825					0.07861239308488166
VAKRTLGG	8	Unmodified	_VAKRTLGG_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	801.4980956912041	1	801.494113	800.486836	2.7556	0.0022086	1.7355	0.001391	4.4911	0.0035996	801.4952914485094	106.22	0.14245	106.28	106.21	106.35	0.05455					14	6	3	0	0	0	0.89198	1	45219	45219		0	0	1	44315000			35758	7559	17680	17758	41827	41827					0.07861239308488166
VAKRTLGG	8	Unmodified	_VAKRTLGG_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	801.4969360232353	1	801.494113	800.486836	2.7366	0.0021934	1.2765	0.0010231	4.0131	0.0032165	801.4949842694629	106.2	0.16596	106.36	106.28	106.45	0.15781					23	8	4	0	0	0	0.89198	1	45424	45424		0	0	1	134220000			35759	7559	17680	17758	41828	41828					0.07861239308488166
VAKRTLGG	8	Unmodified	_VAKRTLGG_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	801.4974853396416	1	801.494113	800.486836	2.8983	0.002323	0.74887	0.00060022	3.6472	0.0029232	801.4946719645131	106.17	0.16357	106.34	106.26	106.42	0.16174					23	8	4	0	0	0	0.89198	1	45347	45347		0	0	1	86057000			35760	7559	17680	17758	41829	41829					0.07861239308488166
VAKRTLGG	8	Unmodified	_VAKRTLGG_					0	0	0		ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	ENST00000606372.5_1_1:2263981-2323005:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	801.494113	800.486836	1.2804	0.0010263	3.7927	0.0030399	5.0732	0.0040661	801.4969358960666	106.26	0.15199	106.26	106.19	106.34	0	-0.052451	0.001566	NaN	0	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37115000			35761	7559	17680	17758							0.07861239308488166
VALAPCIRWMM	11	Unmodified	_VALAPCIRWMM_					0	0	0			REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888427615166	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.30384	1	0.97122	0.47122	1.4712	0.66738								0	0	0	0.63775	1	124	124		0	0	1		+		35762	10621	17681	17759	41830	41830					0.011439111894787857
VALAPCIRWMM	11	Unmodified	_VALAPCIRWMM_					0	0	0			REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.61551	1	1.2829	0.7829	1.7829	0.66738								0	0	0	0.63775	1	251	251		0	0	1		+		35763	10621	17681	17759	41831	41831					0.011439111894787857
VALAPCIRWMM	11	Unmodified	_VALAPCIRWMM_					0	0	0			REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.71638	1	1.3697	0.8697	1.8697	0.65331								0	0	0	0.63775	1	293	293		0	0	1		+		35764	10621	17681	17759	41832	41832					0.011439111894787857
VALAPCIRWMM	11	Unmodified	_VALAPCIRWMM_					0	0	0			REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	REV__nc|ENSG00000161618|Q8IZ83-2|ALDH16A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.888835	1289.64468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.83703	1	1.4903	0.99035	1.9903	0.65331								0	0	0	0.63775	1	343	343		0	0	1		+		35765	10621	17681	17759	41833	41833					0.011439111894787857
VALDPPSD	8	Unmodified	_VALDPPSD_					0	0	0		nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;ENSG00000140199|ENST00000354181|SLC12A6;SLC12A6|p.M255Ifs*61|1|0.11|ENSG00000140199|chr15:34255373-34255373|C/-|frameshift_variant;nc|ENSG00000140199|Q9UHW9-5|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	MSMS	GG20161007_CRH_Patient100_W632_01	3	407.2036010622978	2	407.203076	812.391599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.93	1	104.09	103.59	104.59	0.16055								0	0	0	1.0178	1	43929	43929		0.79363	0	1				35766	2902	17682	17760	41834	41834					-0.02210158673233309
VALERFRV	8	Unmodified	_VALERFRV_					0	0	0		nc|ENSG00000141556|Q9BTW9-4|TBCD;ENSG00000141556|ENST00000355528|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	nc|ENSG00000141556|Q9BTW9-4|TBCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2985107302666	2	495.298176	988.581799	1.8218	0.00090236	0.558	0.00027638	2.3798	0.0011787	495.29811344585573	84.446	0.37964	85.605	85.434	85.814	1.159					22	11	3	0	0	0	0.78622	1	35421	35421		22.453	5.5103	1	5090500			35767	2968	17683	17761	41835	41835					0.08705172779662007
VALHLLWT	8	Unmodified	_VALHLLWT_					0	0	0			REV__ENSG00000134830|ENST00000595464|C5AR2	REV__ENSG00000134830|ENST00000595464|C5AR2	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.1908752322197	3	318.192006	951.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.317	1	89.317	88.817	89.817	0								0	0	0	1.0178	1	37335	37335		0.45834	0	1		+		35768	9920	17684	17762	41836	41836					0.07647269519407018
VALIIILIDI	10	Unmodified	_VALIIILIDI_					0	0	0		tr|A0A553STY8|A0A553STY8_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_05950PE=4SV=1	tr|A0A553STY8|A0A553STY8_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_05950PE=4SV=1	tr|A0A553STY8|A0A553STY8_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_05950PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	365.9182617068291	3	365.917771	1094.73148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.246	1	24.246	23.746	24.746	0								0	0	0	0.66222	1	10112	10112		0.69767	0	1				35769	16674	17685	17763	41837	41837					0.18790680278902983
VALKPLGGL	9	Unmodified	_VALKPLGGL_					0	0	0		ENST00000526757.5_1_11:8772174-8772237:-|nuORF	ENST00000526757.5_1_11:8772174-8772237:-|nuORF	ENST00000526757.5_1_11:8772174-8772237:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.2877380251884	2	434.286746	866.558939	0.66916	0.00029061	1.8618	0.00080857	2.531	0.0010992	434.2875896410786	107.8	0.28674	107.8	107.68	107.97	0					61	15	6	0	0	0	0.85403	1	46265	46265		0	0	1	1496799999.9999998			35770	7127	17686	17764	41838	41838					0.12032153662198652
VALLEILTLG	10	Unmodified	_VALLEILTLG_					0	0	0			REV__tr|A0A553SK90|A0A553SK90_NIACIPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18350PE=4SV=1	REV__tr|A0A553SK90|A0A553SK90_NIACIPrepilin-typeN-terminalcleavage/methylationdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_18350PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.8894225955009	3	347.889992	1040.64815	-0.13086	-4.5525E-05	-1.8182	-0.00063253	-1.9491	-0.00067806	347.88953997281544	22.283	0.21828	23.46	23.321	23.539	1.177					15	6	3	0	0	0	0.79426	1	9319	9319		12.873	0.69786	1	1453500	+		35771	14937	17687	17765	41839	41839					0.12944943831053024
VALLRVTPF	9	Unmodified	_VALLRVTPF_					0	0	0		ENST00000354833.7_1_5:70213930-70214023:+|nuORF;ENSG00000175768|ENST00000321301|TOMM5	ENST00000354833.7_1_5:70213930-70214023:+|nuORF	ENST00000354833.7_1_5:70213930-70214023:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.7762634158134	2	508.318577	1014.6226	3.4221	0.0017395	-1.5569	-0.00079138	1.8653	0.00094815	508.31866143264	61.252	0.5843	62.67	62.312	62.896	1.4177					49	18	4	0	0	0	0.033374	1	25741	25741		49.554	26.818	1	30988000			35772	4384	17688	17766	41840	41840					0.11587514099267082
VALLRVTPF	9	Unmodified	_VALLRVTPF_					0	0	0		ENST00000354833.7_1_5:70213930-70214023:+|nuORF;ENSG00000175768|ENST00000321301|TOMM5	ENST00000354833.7_1_5:70213930-70214023:+|nuORF	ENST00000354833.7_1_5:70213930-70214023:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	508.7762939333916	2	508.318577	1014.6226	3.3532	0.0017045	-1.7278	-0.0008783	1.6253	0.00082617	508.3186527811578	60.718	0.58895	62.684	62.292	62.881	1.9653					46	18	4	0	0	0	0.051726	1	25479	25479		49.554	27.808	1	22782000			35773	4384	17688	17766	41841	41841					0.11587514099267082
VALNFIISY	9	Unmodified	_VALNFIISY_					0	0	0		ENSG00000141232|ENST00000499247|TOB1;nc|ENSG00000183864|Q14106-2|TOB2;ENSG00000183864|ENST00000327492|TOB2	ENSG00000141232|ENST00000499247|TOB1;nc|ENSG00000183864|Q14106-2|TOB2	ENSG00000141232|ENST00000499247|TOB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2966796755791	2	520.294768	1038.57498	3.9965	0.0020793	-0.070407	-3.6632E-05	3.9261	0.0020427	520.2948279018768	82.184	1.0984	83.396	83.038	84.136	1.2125					88	34	4	0	0	0	0.03795	3	34492	34492;34543;34583		77.984	6.8507	1	9707600			35774	2949;4673	17689	17767	41842;41843;41844	41842					0.057238151084447964
VALNLPDKL	9	Unmodified	_VALNLPDKL_					0	0	0		tr|A0A553SIA3|A0A553SIA3_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14485PE=4SV=1	tr|A0A553SIA3|A0A553SIA3_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14485PE=4SV=1	tr|A0A553SIA3|A0A553SIA3_NIACIDEAD/DEAHboxhelicaseOS=NialliacirculansOX=1397GN=CEQ21_14485PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.2011291384697	3	328.20257	981.585882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.456	1	38.456	37.956	38.956	0								0	0	0	0.41705	1	16120	16120		7.1017	0	1				35775	16185	17690	17768	41845	41845					0.09435217482700864
VALQEILV	8	Unmodified	_VALQEILV_					0	0	0			REV__MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	REV__MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.7792236208916	2	442.776211	883.537869	1.594	0.00070576	1.9308	0.0008549	3.5247	0.0015607	442.77782377606366	54.457	0.41039	54.457	54.249	54.659	0					21	13	2	0	0	0	0.89008	1	22738	22738		2.5775	0	1	1578500	+		35776	9356	17691	17769	41846	41846					0.09144143562673435
VALRLLGLHL	10	Unmodified	_VALRLLGLHL_					0	0	0		ENST00000534100.1_1_11:111783470-111789413:+|nuORF	ENST00000534100.1_1_11:111783470-111789413:+|nuORF	ENST00000534100.1_1_11:111783470-111789413:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8669311404228	2	552.866226	1103.7179	0.80723	0.00044629	0.74088	0.00040961	1.5481	0.0008559	552.8663996612937	107.57	0.21745	107.57	107.45	107.67	0					34	10	4	0	0	0	0.89803	1	46113	46113		0.45834	0	1	217370000			35777	7186	17692	17770	41847	41847					0.17018867290335038
VALRYVWPL	9	Unmodified	_VALRYVWPL_					0	0	0		ENST00000460553.1_1_X:153138617-153141318:-|nuORF;nc|ENSG00000198910|P32004-3|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;ENSG00000198910|ENST00000370060|L1CAM	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.8340942263603	2	558.831852	1115.64915	1.2056	0.0006737	2.0001	0.0011177	3.2057	0.0017915	558.8327321909435	72.503	0.35211	72.503	72.332	72.684	0					21	10	3	0	0	0	0.083604	2	30208	30160;30208		54.774	29.374	1	1195700			35778	5101	17693	17771	41848;41849	41849					0.09595202990612961
VALRYVWPL	9	Unmodified	_VALRYVWPL_					0	0	0		ENST00000460553.1_1_X:153138617-153141318:-|nuORF;nc|ENSG00000198910|P32004-3|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;ENSG00000198910|ENST00000370060|L1CAM	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.8336669802666	2	558.831852	1115.64915	1.6823	0.00094015	1.4401	0.00080479	3.1225	0.0017449	558.8320358613208	71.817	0.34613	72.142	71.945	72.291	0.32466					24	10	3	0	0	0	0.27148	2	30041	30041;30101		26.884	12.045	1	1278800			35779	5101	17693	17771	41850;41851	41850					0.09595202990612961
VALRYVWPL	9	Unmodified	_VALRYVWPL_					0	0	0		ENST00000460553.1_1_X:153138617-153141318:-|nuORF;nc|ENSG00000198910|P32004-3|L1CAM;nc|ENSG00000198910|P32004-2|L1CAM;ENSG00000198910|ENST00000370060|L1CAM	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	ENST00000460553.1_1_X:153138617-153141318:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.8340942263603	2	558.831852	1115.64915	3.0693	0.0017152	2.2669	0.0012668	5.3361	0.002982	558.8322065441271	70.588	0.35401	71.942	71.744	72.098	1.3536					19	10	3	0	0	0	0.10294	1	29607	29607		48.346	22.947	1	2281500			35780	5101	17693	17771	41852	41852					0.09595202990612961
VALSGAGP	8	Unmodified	_VALSGAGP_					0	0	0		tr|A0A553SJH9|A0A553SJH9_NIACIHomoserinekinaseOS=NialliacirculansOX=1397GN=thrBPE=3SV=1	tr|A0A553SJH9|A0A553SJH9_NIACIHomoserinekinaseOS=NialliacirculansOX=1397GN=thrBPE=3SV=1	tr|A0A553SJH9|A0A553SJH9_NIACIHomoserinekinaseOS=NialliacirculansOX=1397GN=thrBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	336.5678893923759	2	336.189771	670.36499	0.08776	2.9504E-05	3.556	0.0011955	3.6438	0.001225	336.1907743975093	20.659	0.34581	20.869	20.695	21.041	0.21024					18	10	2	0	0	0	2.3239	1	8518	8518		0.79363	0	1	293930			35781	16249	17694	17772	41853	41853					0.016621972261077644
VALSSSVI	8	Unmodified	_VALSSSVI_					0	0	0		tr|A0A7D6VNJ7|A0A7D6VNJ7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18160PE=3SV=1	tr|A0A7D6VNJ7|A0A7D6VNJ7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18160PE=3SV=1	tr|A0A7D6VNJ7|A0A7D6VNJ7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18160PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.2332641482353	2	388.231636	774.448719	2.5504	0.00099014	1.5679	0.00060871	4.1183	0.0015989	388.2320645982327	75.006	0.78729	75.33	74.989	75.776	0.32464					37	24	3	0	0	0	0.89178	1	31390	31390		0.69038	0	1	672560			35782	16737	17695	17773	41854	41854					0.05247308603156853
VALTGVLQL	9	Unmodified	_VALTGVLQL_					0	0	0			REV__tr|A0A553SPV7|A0A553SPV7_NIACIN5-carboxyaminoimidazoleribonucleotidesynthaseOS=NialliacirculansOX=1397GN=purKPE=3SV=1	REV__tr|A0A553SPV7|A0A553SPV7_NIACIN5-carboxyaminoimidazoleribonucleotidesynthaseOS=NialliacirculansOX=1397GN=purKPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	457.2905761599541	2	457.289485	912.564418	3.2001	0.0014634	0.071612	3.2747E-05	3.2717	0.0014961	457.28940892099257	87.271	0.39568	87.514	87.314	87.71	0.24387					41	13	4	0	0	0	0.061246	1	36569	36569		63.563	0	1	15924000	+		35783	15108	17696	17774	41855	41855					0.10463832454001931
VALTIAGSDS	10	Unmodified	_VALTIAGSDS_					0	0	0		tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2496520876884	2	467.248015	932.481476	3.3676	0.0015735	-3.0255	-0.0014137	0.34209	0.00015984	467.2482563822206	85.014	1.1441	86.61	86.371	87.515	1.5962					168	46	6	0	0	0	0.88022	1	35830	35830		3.5965	0	1	53766000			35784	16360	17697	17775	41856	41856					0.012534709353417384
VALTIAGSDS	10	Unmodified	_VALTIAGSDS_					0	0	0		tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	tr|A0A553SLW7|A0A553SLW7_NIACIHydroxymethylpyrimidine/phosphomethylpyrimidinekinaseOS=NialliacirculansOX=1397GN=thiDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	467.248015	932.481476	3.2871	0.0015359	-3.2636	-0.0015249	0.023507	1.0984E-05	467.24825563373133	86.576	0.57671	86.82	86.548	87.124	0.24387	0.10469	-0.00014345	NaN	3.5965	115	22	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97417000			35785	16360	17697	17775							0.012534709353417384
VALVLPVPIL	10	Unmodified	_VALVLPVPIL_					0	0	0			REV__tr|A0A553SII7|A0A553SII7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14885PE=3SV=1	REV__tr|A0A553SII7|A0A553SII7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14885PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2396423220634	3	345.238844	1032.6947	-0.16276	-5.619E-05	2.7195	0.00093889	2.5568	0.0008827	345.2397768209084	27.55	0.37275	28.829	28.625	28.998	1.2789					14	11	2	0	0	0	0.89803	1	11580	11580		0.15932	0	1	1234500	+		35786	14851	17698	17776	41857	41857					0.17966428452996297
VALVLPVPIL	10	Unmodified	_VALVLPVPIL_					0	0	0			REV__tr|A0A553SII7|A0A553SII7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14885PE=3SV=1	REV__tr|A0A553SII7|A0A553SII7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14885PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2397338747978	3	345.238844	1032.6947	0.22098	7.6292E-05	2.3843	0.00082316	2.6053	0.00089946	345.2395974474765	26.986	0.27964	28.733	28.556	28.835	1.747					13	8	2	0	0	0	0.89803	1	11289	11289		0.15932	0	1	1188300	+		35787	14851	17698	17776	41858	41858					0.17966428452996297
VALVSGGG	8	Unmodified	_VALVSGGG_					0	0	0		tr|A0A7D6VRT8|A0A7D6VRT8_9CLOTDihydroxyacetonekinasesubunitDhaKOS=ClostridiumintestinaleOX=36845GN=dhaKPE=4SV=1	tr|A0A7D6VRT8|A0A7D6VRT8_9CLOTDihydroxyacetonekinasesubunitDhaKOS=ClostridiumintestinaleOX=36845GN=dhaKPE=4SV=1	tr|A0A7D6VRT8|A0A7D6VRT8_9CLOTDihydroxyacetonekinasesubunitDhaKOS=ClostridiumintestinaleOX=36845GN=dhaKPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.1925536990166	2	330.189771	658.36499	-0.069161	-2.2836E-05	1.6424	0.00054231	1.5733	0.00051948	330.19230483090297	26.603	0.49141	27.875	27.653	28.145	1.2715					38	15	3	0	0	0	0.89198	1	11144	11144		0	0	1	1670900			35788	16846	17699	17777	41859	41859					0.022141972261124465
VANPNSAIF	9	Unmodified	_VANPNSAIF_					0	0	0		nc|ENSG00000106682|Q15056-2|EIF4H;ENSG00000106682|ENST00000265753|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	nc|ENSG00000106682|Q15056-2|EIF4H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	466.7466308474541	2	466.745442	931.476331	2.097	0.00097878	-0.42734	-0.00019946	1.6697	0.00077932	466.74578194662985	38.803	0.29913	40.1	39.865	40.164	1.2961					14	9	2	0	0	0	0.09539	1	16258	16258		50.855	6.9967	1	943100			35789	1580	17700	17778	41860	41860					0.007852118633763894
VANVTINRA	9	Unmodified	_VANVTINRA_					0	0	0			REV__tr|A0A553SP48|A0A553SP48_NIACI3-oxoacyl-[acyl-carrier-protein]reductaseOS=NialliacirculansOX=1397GN=fabGPE=3SV=1	REV__tr|A0A553SP48|A0A553SP48_NIACI3-oxoacyl-[acyl-carrier-protein]reductaseOS=NialliacirculansOX=1397GN=fabGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2783080935478	2	479.277441	956.540328	2.692	0.0012902	-0.8179	-0.000392	1.8741	0.00089823	479.27700754469305	80.254	0.49853	80.545	80.279	80.778	0.29056					41	15	3	0	0	0	0.83753	1	33481	33481		1.8442	0	1	5858200	+		35790	15071	17701	17779	41861	41861					0.06031992020314192
VANVTINRA	9	Unmodified	_VANVTINRA_					0	0	0			REV__tr|A0A553SP48|A0A553SP48_NIACI3-oxoacyl-[acyl-carrier-protein]reductaseOS=NialliacirculansOX=1397GN=fabGPE=3SV=1	REV__tr|A0A553SP48|A0A553SP48_NIACI3-oxoacyl-[acyl-carrier-protein]reductaseOS=NialliacirculansOX=1397GN=fabGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	479.277441	956.540328	2.692	0.0012902	-0.8179	-0.000392	1.8741	0.00089823	479.27700754469305	80.254	0.49853	80.545	80.279	80.778	0.29056	-0.064563	-0.00046153	NaN	1.8442	41	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5858200	+		35791	15071	17701	17779							0.06031992020314192
VAPCNRSDP	9	Unmodified	_VAPCNRSDP_					0	0	0			REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.1531249880791	3	320.151881	957.433814	0.79818	0.00025554	0.65692	0.00021032	1.4551	0.00046585	320.15207143230873	66.642	0.80282	68.531	68.245	69.048	1.8889					50	25	3	0	0	0	0.67936	1	28011	28011		8.1555	0.24537	1	1324500	+		35792	8973	17702	17780	41862	41862					-0.046605065365156406
VAPCNRSDP	9	Unmodified	_VAPCNRSDP_					0	0	0			REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	REV__nc|ENSG00000100207|Q9UGU0-2|TCF20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	320.151881	957.433814	0.57	0.00018249	2.0015	0.00064079	2.5715	0.00082327	320.15228569547094	67.184	0.89024	68.573	68.246	69.136	1.3888	0.020899	0.00077432	NaN	8.1555	52	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1726700	+		35793	8973	17702	17780							-0.046605065365156406
VAPFLHGLW	9	Unmodified	_VAPFLHGLW_					0	0	0			REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2913085818291	2	520.28982	1038.56509	2.9039	0.0015109	-0.54007	-0.000281	2.3638	0.0012299	520.289539558218	70.11	0.99977	71.463	70.775	71.775	1.3536					79	31	3	0	0	0	0.11074	2	29438	29438;29491		45.75	9.5825	1	4842300	+		35794	12638	17703	17781	41863;41864	41863					0.047346718936978505
VAPFLHGLW	9	Unmodified	_VAPFLHGLW_					0	0	0			REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2908813357353	2	520.28982	1038.56509	2.2852	0.0011889	0.087065	4.5299E-05	2.3722	0.0012342	520.2896499256341	69.552	0.96802	71.405	70.798	71.766	1.853					82	30	3	0	0	0	0.16975	2	29211	29211;29265		36.466	14.719	1	4124100	+		35795	12638	17703	17781	41865;41866	41865					0.047346718936978505
VAPFLHGLW	9	Unmodified	_VAPFLHGLW_					0	0	0			REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	520.28982	1038.56509	2.9039	0.0015109	-0.54007	-0.000281	2.3638	0.0012299	520.289539558218	70.11	0.99977	71.463	70.775	71.775	1.3536	0.029256	-0.00031801	NaN	45.75	79	31	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4842300	+		35796	12638	17703	17781							0.047346718936978505
VAPFLHGLW	9	Unmodified	_VAPFLHGLW_					0	0	0			REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	REV__ENST00000368489.3_1_1:154321714-154321933:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	520.28982	1038.56509	2.2852	0.0011889	0.087065	4.5299E-05	2.3722	0.0012342	520.2896499256341	69.552	0.96802	71.405	70.798	71.766	1.853	-0.029256	0.00033458	NaN	45.75	82	30	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4124100	+		35797	12638	17703	17781							0.047346718936978505
VAPKYLSF	8	Unmodified	_VAPKYLSF_					0	0	0		nc|ENSG00000178997|Q8NHP7|EXD1;ENSG00000178997|ENST00000458580|EXD1	nc|ENSG00000178997|Q8NHP7|EXD1	nc|ENSG00000178997|Q8NHP7|EXD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1445495486259	2	462.763104	923.511654	1.7227	0.00079722	-3.2868	-0.001521	-1.5641	-0.0007238	462.7615245912824	66.741	0.32997	68.63	68.467	68.797	1.8889					17	10	2	0	0	0	2.3239	1	28024	28024		6.3541	0	1	1868200			35798	4501	17704	17782	41867	41867					0.04683874391173504
VAPKYLSF	8	Unmodified	_VAPKYLSF_					0	0	0		nc|ENSG00000178997|Q8NHP7|EXD1;ENSG00000178997|ENST00000458580|EXD1	nc|ENSG00000178997|Q8NHP7|EXD1	nc|ENSG00000178997|Q8NHP7|EXD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	462.763104	923.511654	2.0279	0.00093846	-3.9708	-0.0018375	-1.9428	-0.00089906	462.7614320769617	67.21	0.26819	68.599	68.467	68.735	1.3888	-0.015482	-0.0004369	NaN	2.8892	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2505600			35799	4501	17704	17782							0.04683874391173504
VAPQKLAT	8	Unmodified	_VAPQKLAT_					0	0	0			REV__ENSG00000170166|ENST00000306324|HOXD4	REV__ENSG00000170166|ENST00000306324|HOXD4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.2544128298759	2	414.252903	826.491253	0.095719	3.9652E-05	2.1577	0.00089385	2.2535	0.0009335	414.253501388374	104	0.15439	104	103.95	104.11	0					10	7	2	0	0	0	0.89178	1	43817	43817		0.69038	0	1	21961000	+		35800	10976	17705	17783	41868	41868					0.07106703731381003
VAPQKLAT	8	Unmodified	_VAPQKLAT_					0	0	0			REV__ENSG00000170166|ENST00000306324|HOXD4	REV__ENSG00000170166|ENST00000306324|HOXD4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	414.252903	826.491253	0.095719	3.9652E-05	2.1577	0.00089385	2.2535	0.0009335	414.253501388374	104	0.15439	104	103.95	104.11	0	-0.069504	0.00040134	NaN	0.69038	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21961000	+		35801	10976	17705	17783							0.07106703731381003
VAPQKLAT	8	Unmodified	_VAPQKLAT_					0	0	0			REV__ENSG00000170166|ENST00000306324|HOXD4	REV__ENSG00000170166|ENST00000306324|HOXD4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	414.252903	826.491253	3.1934	0.0013229	2.3162	0.00095947	5.5096	0.0022824	414.25414235742045	103.92	0.078575	104.09	104.05	104.13	0.1731	0.023207	0.00053259	NaN	0.69038	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10641000	+		35802	10976	17705	17783							0.07106703731381003
VAPVMLILF	9	Unmodified	_VAPVMLILF_					0	0	0			REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.8073608279228	2	501.806457	1001.59836	1.7646	0.00088547	0.74455	0.00037362	2.5091	0.0012591	501.80630235595396	46.027	0.43906	47.403	47.116	47.555	1.3751					18	13	2	0	0	0	0.11074	1	19280	19280		45.75	0	1	1111400	+		35803	12465	17706	17784	41869	41869					0.09762537621395495
VAPVMLILF	9	Unmodified	_VAPVMLILF_					0	0	0			REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	REV__ENST00000335420.9_1_7:129771218-129771323:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.8052856326103	2	501.806457	1001.59836	1.2071	0.00060574	0.71071	0.00035664	1.9178	0.00096237	501.8059052865769	45.537	0.32079	47.503	47.338	47.659	1.9661					13	9	2	0	0	0	0.24585	1	19118	19118		28.173	0	1	847250	+		35804	12465	17706	17784	41870	41870					0.09762537621395495
VAPVNVYFSR	10	Unmodified	_VAPVNVYFSR_					0	0	0			REV__tr|A0A553SIC6|A0A553SIC6_NIACIPeptidoglycanendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_14495PE=3SV=1	REV__tr|A0A553SIC6|A0A553SIC6_NIACIPeptidoglycanendopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_14495PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3129760622978	2	576.314023	1150.61349	0.50543	0.00029129	-2.6181	-0.0015088	-2.1126	-0.0012175	576.3124568732056	20.628	0.50461	20.838	20.63	21.135	0.21024					32	15	3	0	0	0	0.85124	1	8537	8537		6.7232	0.99131	1	966280	+		35805	14846	17707	17785	41871	41871					0.04421120742927087
VAQFVLVNV	9	Unmodified	_VAQFVLVNV_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7989990115166	2	494.794935	987.575317	2.3394	0.0011575	3.6339	0.001798	5.9733	0.0029555	494.79728888514774	45.246	0.22788	46.612	46.497	46.725	1.3653					12	6	2	0	0	0	0.27148	1	18957	18957		26.884	5.137	1	975340			35806	4947	17708	17786	41872	41872					0.08103234828274708
VARKGGGL	8	Unmodified	_VARKGGGL_					0	0	0		ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	757.4709960818291	1	757.467898	756.460622	1.3443	0.0010183	0.97371	0.00073755	2.3181	0.0017559	757.4684235896289	107.96	0.20705	107.96	107.86	108.07	0					32	10	4	0	0	0	0.89198	2	46388	46388;46462		0	0	1	700740000			35807	4572	17709	17787	41873;41874	41873					0.07264970137009641
VARKGGGL	8	Unmodified	_VARKGGGL_					0	0	0		ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	757.4705078005791	1	757.467898	756.460622	2.7297	0.0020676	2.4862	0.0018833	5.2159	0.0039509	757.469506021111	106.23	0.14216	106.28	106.23	106.37	0.05455					13	6	3	0	0	0	0.89198	1	45238	45238		0	0	1	16977000			35808	4572	17709	17787	41875	41875					0.07264970137009641
VARKGGGL	8	Unmodified	_VARKGGGL_					0	0	0		ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.4710571169853	1	757.467898	756.460622	2.4926	0.0018881	2.215	0.0016778	4.7077	0.0035659	757.4695480585182	106.24	0.16997	106.4	106.3	106.47	0.15781					20	8	3	0	0	0	0.89198	1	45434	45434		0	0	1	111270000			35809	4572	17709	17787	41876	41876					0.07264970137009641
VARKGGGL	8	Unmodified	_VARKGGGL_					0	0	0		ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	757.4714843630791	1	757.467898	756.460622	2.4932	0.0018885	1.1618	0.00088003	3.655	0.0027685	757.4686169404013	108.32	0.28435	108.47	108.29	108.57	0.15781					31	17	3	0	0	0	0.89198	1	46833	46833		0	0	1	51330000			35810	4572	17709	17787	41877	41877					0.07264970137009641
VARKGGGL	8	Unmodified	_VARKGGGL_					0	0	0		ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	ENSG00000181284|ENST00000323206|TMEM102	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.4709350466728	1	757.467898	756.460622	2.747	0.0020808	1.0765	0.00081539	3.8235	0.0028961	757.468819158824	106.21	0.16601	106.37	106.27	106.44	0.16174					19	8	3	0	0	0	0.89198	1	45357	45357		0	0	1	74305000			35811	4572	17709	17787	41878	41878					0.07264970137009641
VARLHLSKL	9	Unmodified	_VARLHLSKL_					0	0	0		tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	tr|A0A553SKU2|A0A553SKU2_NIACITranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_19300PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1412231326103	2	518.834926	1035.6553	3.3568	0.0017416	-2.9529	-0.0015321	0.40388	0.00020955	518.8334764350999	92.582	0.58609	93.909	93.438	94.024	1.3269					23	17	2	0	0	0	0.11787	1	38909	38909		2.3027	0	1	672830			35812	16307	17710	17788	41879	41879					0.13889721222130902
VARLSLILD	9	Unmodified	_VARLSLILD_					0	0	0			REV__nc|ENSG00000155229|Q96T76-7|MMS19	REV__nc|ENSG00000155229|Q96T76-7|MMS19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	999.6194335818291	1	999.619707	998.612431	1.8449	0.0018442	-1.7938	-0.0017931	0.051111	5.1092E-05	999.617891692252	66.643	0.17988	68.532	68.436	68.616	1.8889					8	5	2	0	0	0	0.57699	1	27959	27959		12.241	1.4167	1	1162800	+		35813	10491	17711	17789	41880	41880					0.11306906374034043
VARLSLILD	9	Unmodified	_VARLSLILD_					0	0	0			REV__nc|ENSG00000155229|Q96T76-7|MMS19	REV__nc|ENSG00000155229|Q96T76-7|MMS19	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	999.619707	998.612431	1.7645	0.0017639	-0.95328	-0.00095292	0.81124	0.00081093	999.6192349598117	68.431	0.21556	68.753	68.597	68.813	0.32224	0.11046	0.00050771	NaN	12.241	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	241030	+		35814	10491	17711	17789							0.11306906374034043
VARLSLILD	9	Unmodified	_VARLSLILD_					0	0	0			REV__nc|ENSG00000155229|Q96T76-7|MMS19	REV__nc|ENSG00000155229|Q96T76-7|MMS19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	999.619707	998.612431	1.8449	0.0018442	-1.7938	-0.0017931	0.051111	5.1092E-05	999.617891692252	66.643	0.17988	68.532	68.436	68.616	1.8889	-0.11046	-0.00033249	NaN	12.241	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1162800	+		35815	10491	17711	17789							0.11306906374034043
VARRFTTR	8	Unmodified	_VARRFTTR_					0	0	0		ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	ENSG00000116544|ENST00000373347|DLGAP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2020141482353	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.553	1	33.85	33.35	34.35	0.29701								0	0	0	1.0178	1	14088	14088		0.45834	0	1				35816	1972	17712	17790	41881	41881					0.08062806868406369
VARRRRRPV	9	Unmodified	_VARRRRRPV_					0	0	0			REV__ENST00000298307.9_1_14:50234918-50235191:+|nuORF	REV__ENST00000298307.9_1_14:50234918-50235191:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3789550662041	2	583.378689	1164.74283	1.1075	0.00064612	-1.8492	-0.0010788	-0.74168	-0.00043268	583.3772629652059	31.799	0.45944	32.09	31.753	32.212	0.29086					19	14	2	0	0	0	0.8523	2	13207	13207;13280		0.52476	0	1	1054000	+		35817	12302	17713	17791	41882;41883	41882					0.16704359936261426
VARRSHPL	8	Unmodified	_VARRSHPL_					0	0	0			REV__tr|A0A7D6VN20|A0A7D6VN20_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15830PE=4SV=1	REV__tr|A0A7D6VN20|A0A7D6VN20_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15830PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	468.1674377322197	2	468.280318	934.546083	2.9761	0.0013937	0.038753	1.8147E-05	3.0149	0.0014118	468.2805387145009	87.716	0.35765	87.716	87.551	87.909	0					25	11	3	0	0	0	2.3239	1	36735	36735		2.8892	0	1	3135800	+		35818	15327	17714	17792	41884	41884					0.07619135322647708
VASELGVQL	9	Unmodified	_VASELGVQL_					0	0	0		tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	915.5155517458916	1	915.514573	914.507297	2.9856	0.0027334	-1.5425	-0.0014122	1.4432	0.0013212	915.5135153908396	62.089	0.27198	64.046	63.908	64.18	1.9571					11	8	2	0	0	0	0.09539	1	26046	26046		50.855	6.448	1	847410			35819	17097	17715	17793	41885	41885					0.046623651776371844
VASELGVQL	9	Unmodified	_VASELGVQL_					0	0	0		tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	tr|A0A7D6ZI46|A0A7D6ZI46_9CLOTAlpha/beta-typesmallacid-solublesporeproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05695PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	915.514573	914.507297	2.7114	0.0024824	-2.1642	-0.0019814	0.5472	0.00050097	915.5136775464217	62.645	0.23211	64.059	63.899	64.131	1.4134	0.0064155	-0.00022921	NaN	50.855	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	861930			35820	17097	17715	17793							0.046623651776371844
VASFCREF	8	Unmodified	_VASFCREF_					0	0	0			REV__ENST00000592946.1_1_19:44612140-44612197:-|nuORF	REV__ENST00000592946.1_1_19:44612140-44612197:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.1532165408134	3	320.153222	957.437837	0.56999	0.00018249	-2.1869	-0.00070013	-1.6169	-0.00051764	320.15228569547094	67.184	0.89024	68.573	68.246	69.136	1.3888					52	28	2	0	0	0	0.82246	1	28194	28194		19.257	2.3147	1	1726700	+		35821	14080	17716	17794	41886	41886					-0.042584170427858226
VASFCREF	8	Unmodified	_VASFCREF_					0	0	0			REV__ENST00000592946.1_1_19:44612140-44612197:-|nuORF	REV__ENST00000592946.1_1_19:44612140-44612197:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.7275268435478	2	479.726195	957.437837	1.427	0.00068459	-1.2829	-0.00061544	0.14414	6.9148E-05	479.7260646091002	66.683	0.3623	68.572	68.341	68.704	1.8889					19	11	2	0	0	0	0.87701	1	27995	27995		9.3474	4.1168	1	834600	+		35822	14080	17716	17794	41887	41887					-0.042584170427858226
VASGMILVM	9	Unmodified	_VASGMILVM_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	920.4951049685478	1	920.494372	919.487096	1.7771	0.0016358	-0.75403	-0.00069408	1.023	0.00094171	920.494029887029	67.145	1.286	68.534	68.184	69.47	1.3888					111	41	4	0	0	0	0.028763	8	28223	28074;28120;28171;28223;28262;28302;28344;28397		89.427	29.037	1	14547000			35823	2642	17717	17795	41888;41889;41890;41891;41892;41893;41894;41895	41891					0.024131549218054715
VASGMILVM	9	Unmodified	_VASGMILVM_					0	0	0		ENSG00000134910|ENST00000392708|STT3A;nc|ENSG00000134910|P46977-2|STT3A	ENSG00000134910|ENST00000392708|STT3A	ENSG00000134910|ENST00000392708|STT3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	920.4963256716728	1	920.494372	919.487096	1.4601	0.001344	-1.077	-0.00099134	0.38316	0.0003527	920.4939229229432	66.653	0.9249	68.542	68.214	69.139	1.8889					88	29	4	0	0	0	0.03795	7	28066	27868;27911;27963;28018;28066;28105;28149		77.984	19.86	1	14223000			35824	2642	17717	17795	41896;41897;41898;41899;41900;41901;41902	41900					0.024131549218054715
VASHGGGG	8	Unmodified	_VASHGGGG_					0	0	0			REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	321.1565429568291	2	321.15372	640.292888	2.4956	0.00080148	-1.1904	-0.0003823	1.3053	0.00041919	321.15510582431057	86.702	1.1592	87.794	87.452	88.612	1.0918					151	40	6	0	0	0	0.89176	1	36713	36713		0.79363	0	1	52414000	+		35825	9747	17718	17796	41903	41903					-0.041647171276053996
VASHGGGG	8	Unmodified	_VASHGGGG_					0	0	0			REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	321.1561462283134	2	321.15372	640.292888	2.4956	0.00080148	-1.1904	-0.0003823	1.3053	0.00041919	321.15510582431057	86.702	1.1592	87.794	87.452	88.612	1.0918					151	40	6	0	0	0	2.3239	1	36467	36467		0.79363	0	1	52414000	+		35826	9747	17718	17796	41904	41904					-0.041647171276053996
VASHGGGG	8	Unmodified	_VASHGGGG_					0	0	0			REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	321.1560851931572	2	321.15372	640.292888	3.5522	0.0011408	-2.5039	-0.00080415	1.0482	0.00033664	321.15465570982013	86.288	1.0899	87.835	87.512	88.602	1.547					144	38	6	0	0	0	0.89176	2	36375	36375;36542		0.79363	0	1	44648000	+		35827	9747	17718	17796	41905;41906	41905					-0.041647171276053996
VASHGGGG	8	Unmodified	_VASHGGGG_					0	0	0			REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	REV__ENST00000533328.5_1_11:18022099-18029575:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	321.1554748415947	2	321.15372	640.292888	3.5522	0.0011408	-2.5039	-0.00080415	1.0482	0.00033664	321.15465570982013	86.288	1.0899	87.835	87.512	88.602	1.547					144	38	6	0	0	0	2.3239	1	36270	36270		0.79363	0	1	44648000	+		35828	9747	17718	17796	41907	41907					-0.041647171276053996
VASHVLRRY	9	Unmodified	_VASHVLRRY_					0	0	0			REV__nc|ENSG00000015171|Q15326-6|ZMYND11	REV__nc|ENSG00000015171|Q15326-6|ZMYND11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	550.2191650271416	2	550.819807	1099.62506	1.3165	0.00072514	0.43727	0.00024086	1.7537	0.00096599	550.8210881823876	40.227	0.16036	40.227	40.138	40.299	0					7	4	2	0	0	0	0.11898	1	16849	16849		2.3027	0	1	259260	+		35829	8546	17719	17797	41908	41908					0.07923362556948632
VASHVLRRY	9	Unmodified	_VASHVLRRY_					0	0	0			REV__nc|ENSG00000015171|Q15326-6|ZMYND11	REV__nc|ENSG00000015171|Q15326-6|ZMYND11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2170898318291	2	550.819807	1099.62506	0.7454	0.00041058	1.5978	0.0008801	2.3432	0.0012907	550.8212171996169	37.805	0.27232	39.625	39.486	39.759	1.8202					11	8	2	0	0	0	0.11787	1	15895	15895		5.2307	0	1	898690	+		35830	8546	17719	17797	41909	41909					0.07923362556948632
VASSILPR	8	Unmodified	_VASSILPR_					0	0	0			REV__COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	REV__COQ3|p.G306Pfs*34|1|0.06|ENSG00000132423|chr6:99369794-99369795|-/GCACTTTGGGTGACTGAGGTGGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7592651247978	2	421.758352	841.502152	1.2899	0.00054404	-0.72156	-0.00030432	0.56838	0.00023972	421.7576525201865	24.032	0.68145	25.274	24.897	25.578	1.241					37	21	3	0	0	0	0.60362	1	10036	10036		39.957	0.0076237	1	912600	+		35831	8403	17720	17798	41910	41910					0.07506106105665822
VASSVFITL	9	Unmodified	_VASSVFITL_					0	0	0		nc|ENSG00000162458|Q8WUP2-2|FBLIM1;FBLIM1|p.A18Efs*21|1|0.09|ENSG00000162458|chr1:15765035-15765036|-/AGGGCAGTGGTGCAATCTTGGCT|frameshift_variant;nc|ENSG00000162458|Q8WUP2-3|FBLIM1;ENSG00000162458|ENST00000375766|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	nc|ENSG00000162458|Q8WUP2-2|FBLIM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	936.5426513552666	1	936.54006	935.532783	3.1076	0.0029104	-0.77523	-0.00072603	2.3324	0.0021844	936.5398341566879	70.447	0.22559	71.801	71.648	71.873	1.3536					10	6	2	0	0	0	0.12174	1	29559	29559		42.095	0	1	794460			35832	7905	17721	17799	41911	41911					0.06243839700039189
VASVAVGA	8	Unmodified	_VASVAVGA_					0	0	0			REV__tr|A0A7D6VQS0|A0A7D6VQS0_9CLOTPTSsystemmannitol-specificEIICBcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_02735PE=4SV=1	REV__tr|A0A7D6VQS0|A0A7D6VQS0_9CLOTPTSsystemmannitol-specificEIICBcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_02735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	337.1976196169853	2	337.197596	672.38064	-2.8076	-0.00094673	2.3784	0.00080198	-0.42929	-0.00014475	337.1984100059566	14.427	1.0174	14.427	13.825	14.843	0					74	32	3	0	0	0	0.87106	1	5891	5891		14.582	0	1	3939400	+		35833	15390	17722	17800	41912	41912					0.03134483743144756
VATDFFTVL	9	Unmodified	_VATDFFTVL_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.534228503704	1	1012.53497	1011.5277	1.2247	0.00124	0.27688	0.00028035	1.5016	0.0015204	1012.5350969174272	83.628	0.37698	84.816	84.642	85.019	1.1879					28	11	3	0	0	0	0.051699	2	35110	35071;35110		67.344	6.9543	1	19017000			35834	5347	17723	17801	41913;41914	41914					0.02239535837418316
VATDFFTVL	9	Unmodified	_VATDFFTVL_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7721130251884	2	506.771126	1011.5277	1.9231	0.00097458	0.12227	6.1965E-05	2.0454	0.0010365	506.7712577283553	83.655	0.43968	84.843	84.61	85.05	1.1879					29	13	3	0	0	0	0.033521	3	35123	35077;35123;35167		81.864	31.446	1	12414000			35835	5347	17723	17801	41915;41916;41917	41916					0.02239535837418316
VATDFFTVL	9	Unmodified	_VATDFFTVL_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.533862292767	1	1012.53497	1011.5277	2.0438	0.0020694	-1.4308	-0.0014487	0.61299	0.00062067	1012.5339406288967	83.198	0.37408	84.836	84.636	85.01	1.6379					26	11	3	0	0	0	0.03795	3	34902	34854;34902;34941		77.984	17.595	1	13830000			35836	5347	17723	17801	41918;41919;41920	41919					0.02239535837418316
VATDFFTVL	9	Unmodified	_VATDFFTVL_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7730590701103	2	506.771126	1011.5277	2.0715	0.0010498	0.20746	0.00010513	2.2789	0.0011549	506.77115923224386	83.172	0.3438	84.81	84.636	84.98	1.6379					29	10	4	0	0	0	0.033521	2	34919	34867;34919		81.864	28.288	1	9573200			35837	5347	17723	17801	41921;41922	41922					0.02239535837418316
VATETVLAV	9	Unmodified	_VATETVLAV_					0	0	0			REV__nc|ENSG00000070371|P53675-2|CLTCL1	REV__nc|ENSG00000070371|P53675-2|CLTCL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.7635375857353	2	451.7633	901.512048	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.019	1	64.348	63.848	64.848	0.32899								0	0	0	0.40188	1	26823	26823		8.5933	0	1		+		35838	8717	17724	17802	41923	41923					0.057352493203779886
VATEYLKYL	9	Unmodified	_VATEYLKYL_					0	0	0		tr|A0A553SRB2|A0A553SRB2_NIACISulfateABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00650PE=3SV=1	tr|A0A553SRB2|A0A553SRB2_NIACISulfateABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00650PE=3SV=1	tr|A0A553SRB2|A0A553SRB2_NIACISulfateABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_00650PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2190429568291	2	550.305332	1098.59611	2.4954	0.0013732	0.079697	4.3858E-05	2.5751	0.0014171	550.3057218524496	79.668	0.21762	80.919	80.769	80.987	1.2512					10	6	2	0	0	0	0.116	1	33380	33380		9.3474	0	1	354300			35839	16549	17725	17803	41924	41924					0.05075780417291753
VATGILMGI	9	Unmodified	_VATGILMGI_					0	0	0			REV__nc|ENSG00000196950|Q9ULF5-2|SLC39A10	REV__nc|ENSG00000196950|Q9ULF5-2|SLC39A10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7579223513603	2	437.756964	873.499375	2.7876	0.0012203	-0.33351	-0.000146	2.454	0.0010743	437.7568934327542	76.92	0.37826	78.214	78.045	78.423	1.2938					27	11	3	0	0	0	0.04206	1	32308	32308		74.396	0	1	3531300	+		35840	11654	17726	17804	41925	41925					0.057565146565139
VATIPIVLLL	10	Unmodified	_VATIPIVLLL_					0	0	0		ENSG00000184698|ENST00000642046|OR51M1	ENSG00000184698|ENST00000642046|OR51M1	ENSG00000184698|ENST00000642046|OR51M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3629638552666	2	526.359911	1050.70527	0.98309	0.00051746	3.4059	0.0017927	4.389	0.0023102	526.3613694986227	20.349	0.90041	20.349	20.042	20.942	0					60	28	3	0	0	0	0.89803	1	8591	8591		0.45834	0	1	1351600			35841	4704	17727	17805	41926	41926					0.18194411107424457
VATLHVVL	8	Unmodified	_VATLHVVL_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	851.5367309451103	1	851.534915	850.527639	2.9614	0.0025217	0.95708	0.00081499	3.9185	0.0033367	851.5356503638909	109.35	0.27652	109.51	109.35	109.63	0.15898					20	12	2	0	0	0	0.89176	1	47440	47440		0.79363	0	1	45779000	+		35842	10580	17728	17806	41927	41927					0.09639580628106614
VATLHVVL	8	Unmodified	_VATLHVVL_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	851.534915	850.527639	2.7849	0.0023715	0.095693	8.1486E-05	2.8806	0.0024529	851.5347779256701	109.34	0.18625	109.39	109.31	109.5	0.048843	-0.067377	-0.00071362	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2959600	+		35843	10580	17728	17806							0.09639580628106614
VATLHVVL	8	Unmodified	_VATLHVVL_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	851.534915	850.527639	2.9614	0.0025217	0.95708	0.00081499	3.9185	0.0033367	851.5356503638909	109.35	0.27652	109.51	109.35	109.63	0.15898	0.048491	1.9879E-05	NaN	0.79363	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	45779000	+		35844	10580	17728	17806							0.09639580628106614
VATLHVVL	8	Unmodified	_VATLHVVL_					0	0	0			REV__ENSG00000159714|ENST00000565726|ZDHHC1	REV__ENSG00000159714|ENST00000565726|ZDHHC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	851.534915	850.527639	3.0664	0.0026112	1.8984	0.0016166	4.9648	0.0042277	851.5363132483378	109.32	0.23715	109.48	109.34	109.58	0.1548	0.018886	0.00082144	NaN	0.79363	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34657000	+		35845	10580	17728	17806							0.09639580628106614
VATLLIVLL	9	Unmodified	_VATLLIVLL_					0	0	0		ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	954.6610595583916	1	954.659781	953.652505	2.769	0.0026435	-3.5858	-0.0034232	-0.8168	-0.00077976	954.6565291338538	98.324	0.2354	98.405	98.33	98.566	0.080376					14	8	2	0	0	0	0.028763	1	41134	41134		89.427	0	1	263770000			35846	5286	17729	17807	41928	41928					0.17382453044604063
VATLLIVLL	9	Unmodified	_VATLLIVLL_					0	0	0		ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.6603271365166	1	954.659781	953.652505	2.8064	0.0026791	-2.0444	-0.0019517	0.76197	0.00072742	954.6574253586525	98.196	0.27953	98.424	98.362	98.642	0.22776					19	9	3	0	0	0	0.028763	1	41318	41318		89.427	0	1	327490000			35847	5286	17729	17807	41929	41929					0.17382453044604063
VATLLIVLL	9	Unmodified	_VATLLIVLL_					0	0	0		ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	954.659781	953.652505	1.2799	0.0012219	-1.2721	-0.0012144	0.0078017	7.448E-06	954.657980464407	98.404	0.28416	98.404	98.353	98.638	0	0.0032428	0.00097793	NaN	89.427	25	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384530000			35848	5286	17729	17807							0.17382453044604063
VATLLIVLL	9	Unmodified	_VATLLIVLL_					0	0	0		ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	ENSG00000224531|ENST00000416247|SMIM13	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	954.659781	953.652505	3.4663	0.0033092	-2.1993	-0.0020996	1.267	0.0012095	954.6573635244263	98.116	0.25805	98.372	98.276	98.534	0.25636	-0.029223	9.2769E-05	NaN	89.427	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	317730000			35849	5286	17729	17807							0.17382453044604063
VATNILGK	8	Unmodified	_VATNILGK_					0	0	0		ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF;nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC;NFASC|p.V609Sfs*5|1|0.02|ENSG00000163531|chr1:204976788-204976789|-/AGCTCTCA|frameshift_variant;nc|ENSG00000163531|O94856-2|NFASC	ENST00000404977.6_1_1:204937408-204955114:+|nuORF	ENST00000404977.6_1_1:204937408-204955114:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	408.5650207400322	2	408.252903	814.491253	1.7022	0.00069492	-1.6625	-0.00067873	0.039657	1.619E-05	408.2522315734035	65.42	0.28108	67.328	67.095	67.376	1.9085					13	8	2	0	0	0	2.3239	1	27364	27364		18.135	0	1	742780			35850	3695	17730	17808	41930	41930					0.07658703731385685
VATVSLPR	8	Unmodified	_VATVSLPR_					0	0	0		CON__P00761	CON__P00761	CON__P00761	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7581054568291	2	421.758352	841.502152	0.55488	0.00023403	-1.1768	-0.00049631	-0.62188	-0.00026228	421.75760148425576	23.603	0.63559	25.254	24.93	25.566	1.6511					29	20	2	0	0	0	0.65897	1	9813	9813		34.402	0.29928	1	939760		+	35851	332	17731	17809	41931	41931					0.07506106105665822
VAVFLSVAL	9	Unmodified	_VAVFLSVAL_					0	0	0		ENST00000557694.1_1_14:93182479-93199131:-|nuORF;LGMN|p.K248*|1|0.14|ENSG00000100600|chr14:92711737-92711738|-/C|frameshift_variant;LGMN|p.T247Nfs*22|1|0.13|ENSG00000100600|chr14:92711738-92711739|-/CTTGGGTTTCAACCAATGAGAAAACAAAT|frameshift_variant;nc|ENSG00000100600|Q99538-3|LGMN;nc|ENSG00000100600|Q99538-2|LGMN;ENSG00000100600|ENST00000334869|LGMN;ENST00000557315.1_1_14:93198984-93199131:-|nuORF	ENST00000557694.1_1_14:93182479-93199131:-|nuORF	ENST00000557694.1_1_14:93182479-93199131:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	918.5631591677666	1	918.565881	917.558604	4.034	0.0037055	-2.9843	-0.0027413	1.0497	0.00096419	918.5631482913199	91.786	0.42603	92.722	92.529	92.955	0.93623					22	13	2	0	0	0	0.10722	1	38654	38654		46.921	0	1	3178800			35852	1292	17732	17810	41932	41932					0.09652733942323266
VAVGFIIGVL	10	Unmodified	_VAVGFIIGVL_					0	0	0		tr|A0A7D6VWA9|A0A7D6VWA9_9CLOTSerine/threoninetransporterSstTOS=ClostridiumintestinaleOX=36845GN=sstTPE=3SV=1	tr|A0A7D6VWA9|A0A7D6VWA9_9CLOTSerine/threoninetransporterSstTOS=ClostridiumintestinaleOX=36845GN=sstTPE=3SV=1	tr|A0A7D6VWA9|A0A7D6VWA9_9CLOTSerine/threoninetransporterSstTOS=ClostridiumintestinaleOX=36845GN=sstTPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.7810241580009	2	494.315503	986.616454	3.0194	0.0014926	2.8848	0.001426	5.9043	0.0029186	494.31805130519075	73.843	0.46043	75.639	75.377	75.838	1.7962					36	14	3	0	0	0	0.11625	1	30943	30943		40.449	22.314	1	2799300			35853	16974	17733	17811	41933	41933					0.12260995867757174
VAVGVRKGSE	10	Unmodified	_VAVGVRKGSE_					0	0	0			REV__ENSG00000198862|ENST00000361371|LTN1	REV__ENSG00000198862|ENST00000361371|LTN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2913696169853	2	501.290548	1000.56654	1.6159	0.00081002	0.54537	0.00027339	2.1613	0.0010834	501.2905682671978	67.241	1.5614	67.241	66.577	68.139	0					98	49	3	0	0	0	0.89646	2	28051	28051;28104		1.8442	0	1	1969600	+		35854	11746	17734	17812	41934;41935	41934					0.06628261191804086
VAVGVYVG	8	Unmodified	_VAVGVYVG_					0	0	0			REV__ENSG00000101463|ENST00000376862|SYNDIG1	REV__ENSG00000101463|ENST00000376862|SYNDIG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	382.2204162478447	2	382.221072	762.42759	0.10877	4.1575E-05	-1.0104	-0.00038621	-0.90167	-0.00034464	382.2206225599923	62.402	0.68335	62.402	61.993	62.676	0					42	21	3	0	0	0	0.88958	1	26052	26052		2.8892	0	1	8612700	+		35855	9038	17735	17813	41936	41936					0.03687343294279799
VAVGVYVG	8	Unmodified	_VAVGVYVG_					0	0	0			REV__ENSG00000101463|ENST00000376862|SYNDIG1	REV__ENSG00000101463|ENST00000376862|SYNDIG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	382.2208740115166	2	382.221072	762.42759	1.8277	0.0006986	-2.3575	-0.00090108	-0.52974	-0.00020248	382.2200684292532	62.261	0.68449	62.591	62.165	62.85	0.32974					48	21	4	0	0	0	0.88958	2	26048	26048;26088		2.8892	0	1	6863300	+		35856	9038	17735	17813	41937;41938	41937					0.03687343294279799
VAVGVYVG	8	Unmodified	_VAVGVYVG_					0	0	0			REV__ENSG00000101463|ENST00000376862|SYNDIG1	REV__ENSG00000101463|ENST00000376862|SYNDIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.2207519412041	2	382.221072	762.42759	2.3044	0.00088077	-2.6409	-0.0010094	-0.33656	-0.00012864	382.2199663817389	61.249	0.5843	62.667	62.312	62.896	1.4177					39	18	3	0	0	0	0.88958	1	25730	25730		2.8892	0	1	9193800	+		35857	9038	17735	17813	41939	41939					0.03687343294279799
VAVPISATSV	10	Unmodified	_VAVPISATSV_					0	0	0			REV__tr|A0A553SPK6|A0A553SPK6_NIACIQuaternaryaminetransportATP-bindingproteinOS=NialliacirculansOX=1397GN=proVPE=3SV=1	REV__tr|A0A553SPK6|A0A553SPK6_NIACIQuaternaryaminetransportATP-bindingproteinOS=NialliacirculansOX=1397GN=proVPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2781555056572	2	472.276575	942.538597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.634	1	64.634	64.134	65.134	0								0	0	0	0.64816	1	26941	26941		15.847	0	1		+		35858	15093	17736	17814	41940	41940					0.06502938211701803
VAVPVAVTF	9	Unmodified	_VAVPVAVTF_					0	0	0		ENST00000492938.1_1_7:111123705-111161503:-|nuORF;nc|ENSG00000184903|Q96T52-2|IMMP2L;ENSG00000184903|ENST00000405709|IMMP2L	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	902.5342285037041	1	902.534581	901.527304	1.525	0.0013764	-0.79571	-0.00071815	0.72934	0.00065826	902.5338177604043	67.24	0.45709	68.629	68.343	68.8	1.3888					36	14	3	0	0	0	0.0024698	3	28188	28142;28188;28241		129.2	39.774	1	16398000			35859	4716	17737	17815	41941;41942;41943	41942					0.07260160908242597
VAVPVAVTF	9	Unmodified	_VAVPVAVTF_					0	0	0		ENST00000492938.1_1_7:111123705-111161503:-|nuORF;nc|ENSG00000184903|Q96T52-2|IMMP2L;ENSG00000184903|ENST00000405709|IMMP2L	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.7721435427666	2	451.770929	901.527304	2.0294	0.00091684	-1.0284	-0.00046462	1.001	0.00045222	451.77053314605143	67.186	0.39223	68.575	68.438	68.83	1.3888					27	12	3	0	0	0	0.046105	2	28166	28166;28215		70.865	21.196	1	9554500			35860	4716	17737	17815	41944;41945	41944					0.07260160908242597
VAVPVAVTF	9	Unmodified	_VAVPVAVTF_					0	0	0		ENST00000492938.1_1_7:111123705-111161503:-|nuORF;nc|ENSG00000184903|Q96T52-2|IMMP2L;ENSG00000184903|ENST00000405709|IMMP2L	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.7730590701103	2	451.770929	901.527304	1.6449	0.00074314	3.573	0.0016142	5.2179	0.0023573	451.7733908031657	66.741	0.48804	68.63	68.309	68.797	1.8889					29	15	3	0	0	0	0.046105	3	27997	27945;27997;28061		70.865	11.76	1	8420500			35861	4716	17737	17815	41946;41947;41948	41947					0.07260160908242597
VAVPVAVTF	9	Unmodified	_VAVPVAVTF_					0	0	0		ENST00000492938.1_1_7:111123705-111161503:-|nuORF;nc|ENSG00000184903|Q96T52-2|IMMP2L;ENSG00000184903|ENST00000405709|IMMP2L	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	ENST00000492938.1_1_7:111123705-111161503:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	902.5347167849541	1	902.534581	901.527304	1.2615	0.0011386	-1.0713	-0.00096684	0.19028	0.00017174	902.5335233883624	66.713	0.39233	68.602	68.467	68.86	1.8889					30	12	3	0	0	0	0.0052927	3	28016	27964;28016;28076		120.86	19.135	1	15422000			35862	4716	17737	17815	41949;41950;41951	41950					0.07260160908242597
VAVRERDL	8	Unmodified	_VAVRERDL_					0	0	0			REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant	REV__PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2787353396416	2	479.277441	956.540328	2.7138	0.0013007	-0.17202	-8.2446E-05	2.5418	0.0012182	479.2772577349424	64.121	0.69646	64.45	64.027	64.724	0.32899					33	21	2	0	0	0	0.89008	1	26843	26843		2.5775	0	1	1363400	+		35863	11931	17738	17816	41952	41952					0.06031992020314192
VAVTLSPR	8	Unmodified	_VAVTLSPR_					0	0	0			REV__ENSG00000188996|ENST00000380907|HUS1B	REV__ENSG00000188996|ENST00000380907|HUS1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7578307986259	2	421.758352	841.502152	1.2899	0.00054404	-0.72156	-0.00030432	0.56838	0.00023972	421.7576525201865	24.032	0.68145	25.274	24.897	25.578	1.241					37	21	3	0	0	0	0.60362	2	9983	9983;10091		39.957	0	1	912600	+		35864	11597	17739	17817	41953;41954	41953					0.07506106105665822
VAVTLSPR	8	Unmodified	_VAVTLSPR_					0	0	0			REV__ENSG00000188996|ENST00000380907|HUS1B	REV__ENSG00000188996|ENST00000380907|HUS1B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	421.758352	841.502152	1.2899	0.00054404	-0.72156	-0.00030432	0.56838	0.00023972	421.7576525201865	24.032	0.68145	25.274	24.897	25.578	1.241	0.0096054	0.0001153	NaN	39.957	37	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	912600	+		35865	11597	17739	17817							0.07506106105665822
VAVTRSRK	8	Unmodified	_VAVTRSRK_					0	0	0		ENSG00000182156|ENST00000328313|ENPP7	ENSG00000182156|ENST00000328313|ENPP7	ENSG00000182156|ENST00000328313|ENPP7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.7885925173759	2	458.787976	915.561398	1.9742	0.00090574	-1.3722	-0.00062955	0.602	0.00027619	458.78727477786623	76.301	1.3716	76.301	75.723	77.095	0					120	43	6	0	0	0	0.89178	1	31738	31738		0.69038	0	1	382510000			35866	4599	17740	17818	41955	41955					0.10024002119848774
VAWAHILAL	9	Unmodified	_VAWAHILAL_					0	0	0		ENSG00000203859|ENST00000369416|HSD3B2;HSD3B1|p.S264Rfs*3|1|0.06|ENSG00000203857|chr1:119514313-119514314|-/G|frameshift_variant;ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203859|ENST00000369416|HSD3B2;ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2995178103447	2	497.297645	992.580737	0.95487	0.00047485	0.92061	0.00045782	1.8755	0.00093267	497.29799641671775	70.725	0.26954	72.563	72.411	72.681	1.8378					15	8	2	0	0	0	0.051525	1	29649	29649		67.413	38.926	1	1581600			35867	5117;5116	17741	17819	41956	41956					0.08414958410742202
VAWAHILAL	9	Unmodified	_VAWAHILAL_					0	0	0		ENSG00000203859|ENST00000369416|HSD3B2;HSD3B1|p.S264Rfs*3|1|0.06|ENSG00000203857|chr1:119514313-119514314|-/G|frameshift_variant;ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203859|ENST00000369416|HSD3B2;ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	497.297645	992.580737	2.3085	0.001148	0.31295	0.00015563	2.6214	0.0013036	497.297562984734	71.235	0.26803	72.577	72.451	72.719	1.3415	0.0069695	-0.00021048	NaN	67.413	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1255600			35868	5117;5116	17741	17819							0.08414958410742202
VAWQNPVIW	9	Unmodified	_VAWQNPVIW_					0	0	0		ENST00000494718.5_1_X:51637400-51640272:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENSG00000179222|ENST00000326587|MAGED1;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.8000976443291	2	556.798009	1111.58147	2.4281	0.001352	1.4758	0.00082172	3.9039	0.0021737	556.7989569504981	75.815	0.49194	77.109	76.85	77.341	1.2938					38	15	3	0	0	0	0.087207	2	31782	31782;31830		53.576	34.319	1	2212000			35869	4509	17742	17820	41957;41958	41957					0.030137530597812656
VAWQNPVIW	9	Unmodified	_VAWQNPVIW_					0	0	0		ENST00000494718.5_1_X:51637400-51640272:+|nuORF;ENST00000485420.5_1_X:51636757-51640983:+|nuORF;ENSG00000179222|ENST00000326587|MAGED1;nc|ENSG00000179222|Q9Y5V3-2|MAGED1	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	ENST00000494718.5_1_X:51637400-51640272:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.8000366091728	2	556.798009	1111.58147	2.6688	0.001486	0.79312	0.00044161	3.4619	0.0019276	556.798339326878	75.242	0.37285	77.024	76.854	77.227	1.7817					27	11	3	0	0	0	0.061246	1	31572	31572		63.563	39.542	1	1687500			35870	4509	17742	17820	41959	41959					0.030137530597812656
VAWWEWIL	8	Unmodified	_VAWWEWIL_					0	0	0			REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.7940551638603	2	551.789653	1101.56475	2.3288	0.001285	4.216	0.0023263	6.5448	0.0036114	551.7925578719115	47.133	0.25056	49.109	48.966	49.217	1.976					13	7	2	0	0	0	0.87803	1	19749	19749		10.183	0.10947	1	1140000	+		35871	13340	17743	17821	41960	41960					0.018032521738405194
VAWWEWIL	8	Unmodified	_VAWWEWIL_					0	0	0			REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	551.789653	1101.56475	2.1727	0.0011989	2.7046	0.0014924	4.8773	0.0026912	551.7921824046016	47.638	0.284	49.02	48.858	49.142	1.3825	-0.044509	-0.0013041	NaN	10.183	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	882130	+		35872	13340	17743	17821							0.018032521738405194
VAWWEWIL	8	Unmodified	_VAWWEWIL_					0	0	0			REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	REV__ENST00000479818.5_1_22:50717015-50717261:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	551.789653	1101.56475	2.3288	0.001285	4.216	0.0023263	6.5448	0.0036114	551.7925578719115	47.133	0.25056	49.109	48.966	49.217	1.976	0.044509	0.00036389	NaN	10.183	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1140000	+		35873	13340	17743	17821							0.018032521738405194
VAWYKNNI	8	Unmodified	_VAWYKNNI_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2708618044853	2	504.269084	1006.52362	2.0001	0.0010086	-0.16817	-8.4802E-05	1.8319	0.00092377	504.26947607135696	53.856	0.31937	53.856	53.679	53.998	0					15	9	2	0	0	0	0.72134	1	22432	22432		28.173	3.4993	1	1198300			35874	3425;7900	17744	17822	41961	41961					0.02061491134361404
VAWYKNNI	8	Unmodified	_VAWYKNNI_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	504.2702209353447	2	504.269084	1006.52362	2.2144	0.0011166	1.3842	0.00069803	3.5986	0.0018147	504.2699025568288	53.147	0.37093	53.47	53.29	53.661	0.32283					19	11	2	0	0	0	0.80415	1	22290	22290		20.871	0.41758	1	1418200			35875	3425;7900	17744	17822	41962	41962					0.02061491134361404
VAYAIDWIRP	10	Unmodified	_VAYAIDWIRP_					0	0	0			REV__tr|A0A7D6VXS9|A0A7D6VXS9_9CLOTAminoglycosidephosphotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13955PE=4SV=1	REV__tr|A0A7D6VXS9|A0A7D6VXS9_9CLOTAminoglycosidephosphotransferasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13955PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1807433962822	3	401.888874	1202.64479	1.8657	0.0007498	-3.7701	-0.0015152	-1.9044	-0.00076536	401.8888789284159	44.664	0.25445	46.623	46.513	46.767	1.9596					12	7	2	0	0	0	0.12557	1	18683	18683		1.7423	0.54893	1	748680	+		35876	15553	17745	17823	41963	41963					0.051576937770278164
VAYEYTEAEDK	11	Unmodified	_VAYEYTEAEDK_					0	0	0		ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.2977783083916	2	659.29589	1316.57723	2.3311	0.0015369	0.33351	0.00021988	2.6647	0.0017568	659.2961034811943	59.356	0.55858	60.776	60.556	61.115	1.4196					55	17	4	0	0	0	0.33697	1	24929	24929		43.772	17.504	1	4001200			35877	2679	17746	17824	41964	41964					-0.06839845735112249
VAYEYTEAEDK	11	Unmodified	_VAYEYTEAEDK_					0	0	0		ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	ENSG00000135643|ENST00000258111|KCNMB4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.2983276247978	2	659.29589	1316.57723	2.3666	0.0015603	0.23031	0.00015184	2.5969	0.0017121	659.2964169485473	59.028	0.4994	60.997	60.694	61.193	1.969					43	15	4	0	0	0	0.79576	1	24707	24707		24.991	11.085	1	3049300			35878	2679	17746	17824	41965	41965					-0.06839845735112249
VAYHLLYKRMW	11	Unmodified	_VAYHLLYKRMW_					0	0	0		ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	740.4026977419853	2	740.400107	1478.78566	2.1372	0.0015824	1.9629	0.0014534	4.1002	0.0030358	740.40175138507	58.866	0.38068	58.866	58.656	59.037	0					34	11	4	0	0	0	0.83203	2	24514	24514;24568		13.906	7.1829	1	3944000			35879	7019	17747	17825	41966;41967	41966					0.06541949158804528
VAYHLLYKRMW	11	Unmodified	_VAYHLLYKRMW_					0	0	0		ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	ENST00000508970.1_1_2:79924974-80004158:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	740.400107	1478.78566	0.4353	0.00032229	1.9962	0.001478	2.4315	0.0018003	740.4013138618071	57.207	0.14481	58.622	58.551	58.696	1.4145	-0.10733	7.7536E-05	NaN	13.906	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1415500			35880	7019	17747	17825							0.06541949158804528
VAYIMNEYS	9	Unmodified	_VAYIMNEYS_					0	0	0		tr|A0A7D6VXJ0|A0A7D6VXJ0_9CLOTMethyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12295PE=4SV=1	tr|A0A7D6VXJ0|A0A7D6VXJ0_9CLOTMethyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12295PE=4SV=1	tr|A0A7D6VXJ0|A0A7D6VXJ0_9CLOTMethyltransferasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12295PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2537719607353	3	363.835559	1088.48485	2.3462	0.00085362	0.21479	7.8148E-05	2.5609	0.00093176	364.1706207022499	85.925	0.21314	86.177	86.068	86.281	0.25227					11	6	2	0	0	0	0.11938	1	35931	35931		1.1933	0	1	493960			35881	16983	17748	17826	41968	41968					-0.055856022823036255
VAYQLDTL	8	Unmodified	_VAYQLDTL_					0	0	0			REV__tr|A0A7D6VUE2|A0A7D6VUE2_9CLOTPeptidemethioninesulfoxidereductaseMsrBOS=ClostridiumintestinaleOX=36845GN=msrBPE=3SV=1	REV__tr|A0A7D6VUE2|A0A7D6VUE2_9CLOTPeptidemethioninesulfoxidereductaseMsrBOS=ClostridiumintestinaleOX=36845GN=msrBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1466247439384	2	461.74765	921.480748	1.0343	0.00047759	1.3988	0.00064589	2.4331	0.0011235	461.7485101309002	30.134	0.24523	31.416	31.256	31.502	1.2825					12	7	2	0	0	0	2.3239	1	12603	12603		0.69038	0	1	727150	+		35882	15512	17749	17827	41969	41969					0.01686676286283273
VAYQLDTL	8	Unmodified	_VAYQLDTL_					0	0	0			REV__tr|A0A7D6VUE2|A0A7D6VUE2_9CLOTPeptidemethioninesulfoxidereductaseMsrBOS=ClostridiumintestinaleOX=36845GN=msrBPE=3SV=1	REV__tr|A0A7D6VUE2|A0A7D6VUE2_9CLOTPeptidemethioninesulfoxidereductaseMsrBOS=ClostridiumintestinaleOX=36845GN=msrBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	461.74765	921.480748	1.0753	0.00049654	0.55505	0.0002563	1.6304	0.00075283	461.7480579907455	29.686	0.24261	31.484	31.325	31.568	1.7987	0.033952	-0.0005872	NaN	0.69038	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	658690	+		35883	15512	17749	17827							0.01686676286283273
VAYRRRRWRK	10	Unmodified	_VAYRRRRWRK_					0	0	0			REV__ENSG00000182162|ENST00000381297|P2RY8	REV__ENSG00000182162|ENST00000381297|P2RY8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2526122927666	4	362.472089	1445.85925	-0.10877	-3.9425E-05	-1.256	-0.00045527	-1.3648	-0.0004947	362.4718305301055	10.081	0.33862	10.159	9.9772	10.316	0.077971					19	10	3	0	0	0	0.12561	1	4151	4151		0.15932	0.15932	1	331960	+		35884	11341	17750	17828	41970	41970					0.15415678436147573
VAYRRRRWRK	10	Unmodified	_VAYRRRRWRK_					0	0	0			REV__ENSG00000182162|ENST00000381297|P2RY8	REV__ENSG00000182162|ENST00000381297|P2RY8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2520324587822	4	362.472089	1445.85925	-0.33142	-0.00012013	-2.2813	-0.00082691	-2.6127	-0.00094704	362.4711517272195	9.7329	0.12112	10.478	10.388	10.509	0.74462					8	3	3	0	0	0	0.12561	1	4037	4037		0.15932	0.064481	1	403870	+		35885	11341	17750	17828	41971	41971					0.15415678436147573
VCGPSATPAI	10	Unmodified	_VCGPSATPAI_					0	0	0		ENST00000369214.2_1_6:100062108-100062660:+|nuORF	ENST00000369214.2_1_6:100062108-100062660:+|nuORF	ENST00000369214.2_1_6:100062108-100062660:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0389282107353	3	305.824994	914.453153	-3.2562	-0.00099583	-0.91802	-0.00028075	-4.1742	-0.0012766	305.8254379355583	18.315	0.80046	18.315	18.119	18.92	0					50	28	2	0	0	0	0.12561	1	7778	7778		0	0	1	1189200			35886	6095	17751	17829	41972	41972					-0.007495502456208669
VCIMIVCC	8	Unmodified	_VCIMIVCC_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|101|3|anti-sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|101|3|anti-sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|101|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	883.3910400271416	1	883.390835	882.383559	2.8033	0.0024764	-1.4156	-0.0012505	1.3877	0.0012258	883.3892630111478	104.82	0.07695	104.88	104.83	104.91	0.056801					5	3	2	0	0	0	0.89176	1	44316	44316		0.79363	0	1	19369000			35887	7713	17752	17830	41973	41973					-0.062337917818922506
VCKAGKKK	8	Unmodified	_VCKAGKKK_					0	0	0		nc|ENSG00000090989|Q9NV70-2|EXOC1;ENSG00000090989|ENST00000381295|EXOC1;ENST00000505501.1_1_4:56724546-56734701:+|nuORF	nc|ENSG00000090989|Q9NV70-2|EXOC1	nc|ENSG00000090989|Q9NV70-2|EXOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	431.2733032107353	2	431.270573	860.526593	2.2045	0.00095072	3.5814	0.0015446	5.7859	0.0024953	431.27196560960897	66.973	1.2478	67.298	66.718	67.965	0.32449					73	40	2	0	0	0	0.89178	1	28010	28010		0.69038	0	1	5101700			35888	1145	17753	17831	41974	41974					0.09075042987524284
VCLLVWLL	8	Unmodified	_VCLLVWLL_					0	0	0			REV__ENSG00000105509|ENST00000540069|HAS1	REV__ENSG00000105509|ENST00000540069|HAS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.7941161990166	2	479.793349	957.572146	3.1858	0.0015285	-1.294	-0.00062086	1.8918	0.00090767	479.79258500155885	75.659	1.2408	75.981	75.55	76.791	0.32163					82	39	3	0	0	0	0.89176	1	31760	31760		0.79363	0	1	3050500	+		35889	9179	17754	17832	41975	41975					0.09166268449905601
VCLQGLWK	8	Unmodified	_VCLQGLWK_					0	0	0		ENSG00000111331|ENST00000228928|OAS3	ENSG00000111331|ENST00000228928|OAS3	ENSG00000111331|ENST00000228928|OAS3	MSMS	GG20161007_CRH_Patient100_A02_01	1	316.1759826540947	3	316.177479	945.510608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.907	1	30.907	30.407	31.407	0								0	0	0	1.0178	1	12946	12946		0.45834	0	1				35890	1735	17755	17833	41976	41976					0.03567336750620598
VCLVLPTR	8	Unmodified	_VCLVLPTR_					0	0	0			REV__nc|ENSG00000140945|P55290-5|CDH13	REV__nc|ENSG00000140945|P55290-5|CDH13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	300.8501769900322	3	300.849363	899.526258	0.52068	0.00015665	-0.20652	-6.2133E-05	0.31416	9.4514E-05	300.84998155927497	38.645	0.44492	40.481	40.209	40.654	1.8366					37	13	4	0	0	0	0.88846	1	16187	16187		3.5965	0	1	2753300	+		35891	10135	17756	17834	41977	41977					0.07247623267664949
VCPCGVLLSHV	11	Unmodified	_VCPCGVLLSHV_					0	0	0			REV__ENST00000418066.2_1_2:69871997-69880284:+|nuORF	REV__ENST00000418066.2_1_2:69871997-69880284:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.1964294314384	3	376.196434	1125.56747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.964	1	47.964	47.464	48.464	0								0	0	0	0.63775	1	20039	20039		0.50596	0	1		+		35892	12956	17757	17835	41978	41978					0.009710162448300252
VCPCGVLLSHV	11	Unmodified	_VCPCGVLLSHV_					0	0	0			REV__ENST00000418066.2_1_2:69871997-69880284:+|nuORF	REV__ENST00000418066.2_1_2:69871997-69880284:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.1974059939384	3	376.196434	1125.56747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.92	1	49.306	48.806	49.806	1.3862								0	0	0	0.63775	1	20060	20060		1.3296	0.25818	1		+		35893	12956	17757	17835	41979	41979					0.009710162448300252
VCPPGPCC	8	Unmodified	_VCPPGPCC_					0	0	0		nc|ENSG00000171462|Q6UY11-2|DLK2;ENSG00000171462|ENST00000372488|DLK2	nc|ENSG00000171462|Q6UY11-2|DLK2	nc|ENSG00000171462|Q6UY11-2|DLK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1526672244072	2	388.15042	774.286287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.929	1	23.162	22.662	23.662	0.23306								0	0	0	1.0178	1	9563	9563		0.79363	0.79363	1				35894	4189	17758	17836	41980	41980					-0.10988437666514983
VCPRIPIP	8	Unmodified	_VCPRIPIP_					0	0	0			REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	447.7667114138603	2	447.765123	893.515694	2.8301	0.0012672	0.1618	7.2449E-05	2.9919	0.0013396	447.76505287916825	72.387	0.45779	73.717	73.455	73.913	1.3297					36	14	3	0	0	0	0.89178	1	30311	30311		0.69038	0	1	7690600	+		35895	11629	17759	17837	41981	41981					0.06467640613254844
VCQMLAEWGLF	11	Unmodified	_VCQMLAEWGLF_					0	0	0			REV__ENSG00000253710|ENST00000521508|ALG11	REV__ENSG00000253710|ENST00000521508|ALG11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	649.3166992068291	2	648.809402	1295.60425	1.4904	0.000967	3.4057	0.0022096	4.8961	0.0031766	648.8116872303297	79.719	0.95788	81.435	80.89	81.848	1.7167					57	30	3	0	0	0	0.77451	1	33300	33300		16.149	6.0752	1	899280	+		35896	11958	17760	17838	41982	41982					-0.031727319292485845
VCSSLTAHLV	10	Unmodified	_VCSSLTAHLV_					0	0	0		ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant;ENSG00000198633|ENST00000433050|ZNF534;nc|ENSG00000198633|Q76KX8|ZNF534	ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant	ZNF534|p.R496Gfs*4|1|0.11|ENSG00000198633|chr19:52438905-52438906|-/GGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2768432497978	2	515.273509	1028.53247	1.2504	0.0006443	3.2084	0.0016532	4.4588	0.0022975	515.275540992107	56.492	0.72572	58.461	58.149	58.874	1.9684					90	23	6	0	0	0	0.11481	1	23777	23777		61.357	1.2836	1	275520000			35897	5063	17761	17839	41983	41983					0.019340967085327065
VCTSNNECDND	11	Unmodified	_VCTSNNECDND_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2092773318291	2	607.208434	1212.40232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.01	1	111.01	110.51	111.51	0								0	0	0	0.63775	1	48028	48028		0	0	1		+		35898	10269	17762	17840	41984	41984					-0.19538912143434572
VCTSNNECDND	11	Unmodified	_VCTSNNECDND_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2087890505791	2	607.208434	1212.40232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.11	1	111.11	110.61	111.61	0								0	0	0	0.63775	1	48065	48065		0	0	1		+		35899	10269	17762	17840	41985	41985					-0.19538912143434572
VCTSNNECDND	11	Unmodified	_VCTSNNECDND_					0	0	0			REV__nc|ENSG00000145147|O94813-3|SLIT2	REV__nc|ENSG00000145147|O94813-3|SLIT2	MSMS	GG20161007_CRH_Patient100_A02_01	1	607.2087890505791	2	607.208434	1212.40232	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.2	1	111.2	110.7	111.7	0								0	0	0	0.63775	1	48100	48100		0	0	1		+		35900	10269	17762	17840	41986	41986					-0.19538912143434572
VCTWRGRRYP	10	Unmodified	_VCTWRGRRYP_					0	0	0			REV__ENST00000493217.1_1_7:100071895-100075661:-|nuORF	REV__ENST00000493217.1_1_7:100071895-100075661:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	432.3704711794853	3	431.892624	1292.65604	0.59669	0.00025771	0.71579	0.00030914	1.3125	0.00056685	431.8937064458433	99.582	0.20459	99.582	99.472	99.676	0					9	6	2	0	0	0	0.12561	1	41667	41667		0.15932	0	1	443450	+		35901	10849	17763	17841	41987	41987					0.021421925995355195
VCVCVCFLLI	10	Unmodified	_VCVCVCFLLI_					0	0	0			REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF	REV__ENST00000423538.6_1_1:156180712-156180916:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	556.2888061404228	2	556.289259	1110.56397	1.6575	0.00092203	1.1014	0.00061271	2.7589	0.0015347	556.2897149688054	51.757	0.49296	52.082	51.85	52.343	0.32554					34	15	3	0	0	0	0.79742	1	21625	21625		12.532	0.89125	1	1843500	+		35902	12987	17764	17842	41988	41988					0.013106301466450532
VDADHLLLL	9	Unmodified	_VDADHLLLL_					0	0	0			REV__nc|ENSG00000131503|Q8IWZ3-2|ANKHD1;REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.7902099490166	2	504.78985	1007.56515	0.50374	0.00025428	0.56437	0.00028489	1.0681	0.00053917	504.79005089419445	51.502	0.46144	53.478	53.311	53.772	1.9753					30	14	3	0	0	0	0.24063	1	21670	21670		28.487	0	1	5745000	+		35903	14431;14430	17765	17843	41989	41989					0.06166627103061728
VDCPRLKKMQ	10	Unmodified	_VDCPRLKKMQ_					0	0	0			REV__ENST00000393033.8_1_19:14603694-14606929:-|nuORF	REV__ENST00000393033.8_1_19:14603694-14606929:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1218.470385730267	1	1217.64931	1216.64203	1.6622	0.002024	0.26818	0.00032655	1.9304	0.0023505	1218.6539269496507	36.413	0.047218	36.413	36.383	36.43	0					6	4	2	0	0	0	0.12542	1	15255	15255		3.9444	0	1	6353800	+		35904	12807	17766	17844	41990	41990					0.04237779056211366
VDCSIALQKF	10	Unmodified	_VDCSIALQKF_					0	0	0		tr|A0A553SFX0|A0A553SFX0_NIACIYheC/YheDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_09650PE=4SV=1	tr|A0A553SFX0|A0A553SFX0_NIACIYheC/YheDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_09650PE=4SV=1	tr|A0A553SFX0|A0A553SFX0_NIACIYheC/YheDfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_09650PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.2970458865166	2	562.294442	1122.57433	3.2243	0.001813	0.39785	0.00022371	3.6222	0.0020367	562.2941712805355	81.222	0.37152	82.456	82.255	82.626	1.2332					27	11	3	0	0	0	0.77604	1	34071	34071		14.838	4.0143	1	2339600			35905	16083	17767	17845	41991	41991					0.01794652397052232
VDDEDIEP	8	Unmodified	_VDDEDIEP_					0	0	0			REV__tr|A0A7D6VPQ3|A0A7D6VPQ3_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19685PE=4SV=1	REV__tr|A0A7D6VPQ3|A0A7D6VPQ3_9CLOTGlycosyltransferasefamily4proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19685PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1338683962822	3	311.13455	930.381822	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.3	109.8	110.8	0.16133								0	0	0	1.0178	1	47853	47853		0	0	1		+		35906	15361	17768	17846	41992	41992					-0.08615391469265887
VDFFVRLFTQ	10	Unmodified	_VDFFVRLFTQ_					0	0	0		nc|ENSG00000011021|P51797-4|CLCN6;nc|ENSG00000011021|P51797-2|CLCN6;nc|ENSG00000011021|P51797-3|CLCN6;nc|ENSG00000011021|P51797-6|CLCN6;ENSG00000011021|ENST00000346436|CLCN6;nc|ENSG00000011021|P51797-5|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	nc|ENSG00000011021|P51797-4|CLCN6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1271.869555652142	1	1271.67828	1270.67101	-0.15519	-0.00019736	-1.4573	-0.0018532	-1.6125	-0.0020506	1272.6791943200185	38.172	0.34266	39.992	39.788	40.131	1.8202					16	10	2	0	0	0	0.12525	1	15933	15933		6.7232	3.1267	1	1447300			35907	7814	17769	17847	41993	41993					0.04649962948519715
VDGFQRQKL	9	Unmodified	_VDGFQRQKL_					0	0	0		nc|ENSG00000153789|Q6ZTR7|CIBAR2;ENSG00000153789|ENST00000539556|CIBAR2	nc|ENSG00000153789|Q6ZTR7|CIBAR2	nc|ENSG00000153789|Q6ZTR7|CIBAR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	545.7657348513603	2	545.803823	1089.59309	3.215	0.0017548	3.8383	0.0020949	7.0533	0.0038497	545.8049300232742	74.288	0.42074	75.606	75.438	75.859	1.318					19	13	2	0	0	0	0.091909	1	31168	31168		20.454	0	1	886950			35908	3364	17770	17848	41994	41994					0.051879500831546466
VDKFIDVI	8	Unmodified	_VDKFIDVI_					0	0	0		tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	948.5434448122978	1	948.54006	947.532783	2.2365	0.0021214	0.75218	0.00071347	2.9886	0.0028349	948.5406799814609	82.995	0.52486	84.208	83.951	84.476	1.2125					49	16	4	0	0	0	0.43377	1	34801	34801		52.268	1.4133	1	35106000			35909	17113	17771	17849	41995	41995					0.056918397000458754
VDKFIDVI	8	Unmodified	_VDKFIDVI_					0	0	0		tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	tr|A0A7D6ZMP3|A0A7D6ZMP3_9CLOTFAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_12815PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	948.5435668826103	1	948.54006	947.532783	3.164	0.0030012	1.0788	0.0010233	4.2428	0.0040245	948.5411153493965	82.519	0.52239	84.189	83.892	84.415	1.67					48	16	4	0	0	0	0.43377	1	34604	34604		52.268	1.4133	1	29375000			35910	17113	17771	17849	41996	41996					0.056918397000458754
VDKIRRRKLP	10	Unmodified	_VDKIRRRKLP_					0	0	0			REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.6147643923759	3	427.613967	1279.82007	3.1867	0.0013627	0.45343	0.00019389	3.6402	0.0015566	427.6140414529739	105.89	0.099106	106.05	106	106.1	0.15859					8	4	2	0	0	0	0.89803	1	45235	45235		0.15932	0	1	29279000	+		35911	15679	17772	17850	41997	41997					0.1913553336194127
VDKIRRRKLP	10	Unmodified	_VDKIRRRKLP_					0	0	0			REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	427.613967	1279.82007	0.47657	0.00020379	3.5623	0.0015233	4.0389	0.0017271	427.9494176137546	105.97	0.058281	105.97	105.93	105.99	0	-0.046863	0.0027574	NaN	0.15932	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5496800	+		35912	15679	17772	17850							0.1913553336194127
VDKIRRRKLP	10	Unmodified	_VDKIRRRKLP_					0	0	0			REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	427.613967	1279.82007	3.1867	0.0013627	0.45343	0.00019389	3.6402	0.0015566	427.6140414529739	105.89	0.099106	106.05	106	106.1	0.15859	0.027211	-0.0012308	NaN	0.15932	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29279000	+		35913	15679	17772	17850							0.1913553336194127
VDKIRRRKLP	10	Unmodified	_VDKIRRRKLP_					0	0	0			REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	REV__tr|A0A7D6ZNK4|A0A7D6ZNK4_9CLOTFlagellarproteinexportATPaseFliIOS=ClostridiumintestinaleOX=36845GN=fliIPE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	427.613967	1279.82007	3.2743	0.0014001	-0.11152	-4.7685E-05	3.1628	0.0013525	427.6145594719362	105.87	0.099022	106.04	105.97	106.07	0.16679	0.019652	-0.0019555	NaN	0.15932	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13191000	+		35914	15679	17772	17850							0.1913553336194127
VDKYIKSL	8	Unmodified	_VDKYIKSL_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2885009646416	2	483.286943	964.559333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.929	1	84.142	83.642	84.642	1.2125								0	0	0	1.0178	1	34809	34809		13.508	0.97634	1		+		35915	10396	17773	17851	41998	41998					0.07563528591379054
VDMLLMKSLTA	11	Unmodified	_VDMLLMKSLTA_					0	0	0		ENST00000399138.4_1_17:18088317-18110139:+|nuORF	ENST00000399138.4_1_17:18088317-18110139:+|nuORF	ENST00000399138.4_1_17:18088317-18110139:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1221.060595691204	1	1221.65814	1220.65087	1.1232	0.0013721	1.2356	0.0015094	2.3588	0.0028816	1222.6629298745597	40.881	0.28695	42.773	42.673	42.96	1.8927					10	8	2	0	0	0	0.14606	1	17095	17095		0.30703	0	1	686440			35916	6334	17774	17852	41999	41999					0.04936707902038506
VDMPANNK	8	Unmodified	_VDMPANNK_					0	0	0		nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;ENST00000448973.6_1_16:684599-685202:-|nuORF;ENST00000456420.6_2_16:684599-686105:-|nuORF;ENSG00000130731|ENST00000301686|METTL26	nc|ENSG00000130731|Q96S19-3|METTL26	nc|ENSG00000130731|Q96S19-3|METTL26	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1198303103447	2	444.715827	887.417102	0.81767	0.00036363	-0.43567	-0.00019375	0.382	0.00016988	444.71579641446266	18.395	0.26406	19.374	19.193	19.457	0.97922					14	9	2	0	0	0	2.3239	1	7655	7655		7.9102	3.1541	1	828880			35917	2455	17775	17853	42000	42000					-0.031110074224557138
VDMPANNK	8	Unmodified	_VDMPANNK_					0	0	0		nc|ENSG00000130731|Q96S19-3|METTL26;nc|ENSG00000130731|Q96S19-5|METTL26;ENST00000448973.6_1_16:684599-685202:-|nuORF;ENST00000456420.6_2_16:684599-686105:-|nuORF;ENSG00000130731|ENST00000301686|METTL26	nc|ENSG00000130731|Q96S19-3|METTL26	nc|ENSG00000130731|Q96S19-3|METTL26	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1205016970634	2	444.715827	887.417102	0.46666	0.00020753	1.0331	0.00045943	1.4998	0.00066696	444.7158369626674	17.943	0.28734	19.391	19.204	19.492	1.448					14	9	3	0	0	0	2.3239	1	7445	7445		4.3292	2.2695	1	1015400			35918	2455	17775	17853	42001	42001					-0.031110074224557138
VDPESGIIKTA	11	Unmodified	_VDPESGIIKTA_					0	0	0		ENSG00000113100|ENST00000231021|CDH9;ENST00000505045.1_1_5:26903562-26988455:-|nuORF	ENSG00000113100|ENST00000231021|CDH9	ENSG00000113100|ENST00000231021|CDH9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8152343630791	2	565.308603	1128.60265	2.0685	0.0011694	-0.23914	-0.00013519	1.8294	0.0010342	565.3088203633504	69.265	0.62975	70.631	70.187	70.817	1.3657					29	15	3	0	0	0	0.54522	1	29014	29014		22.736	6.8891	1	3794000			35919	1806	17776	17854	42002	42002					0.04349673578030888
VDQLAKTH	8	Unmodified	_VDQLAKTH_					0	0	0			REV__ENST00000536072.6_1_16:67909906-67914140:+|nuORF	REV__ENST00000536072.6_1_16:67909906-67914140:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.2529174685478	2	456.250892	910.48723	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.506	1	41.506	41.006	42.006	0								0	0	0	1.0178	1	17377	17377		4.3292	1.44	1		+		35920	8588	17777	17855	42003	42003					0.028406142376638854
VDQLLKKEHK	10	Unmodified	_VDQLLKKEHK_					0	0	0			REV__tr|A0A7D6W1T5|A0A7D6W1T5_9CLOTManganesecatalasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03910PE=3SV=1	REV__tr|A0A7D6W1T5|A0A7D6W1T5_9CLOTManganesecatalasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03910PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	413.5550109744072	3	413.24695	1236.71902	0.34727	0.00014351	1.2248	0.00050615	1.5721	0.00064965	413.58181151188245	32.713	0.31086	33.991	33.856	34.167	1.2782					19	10	3	0	0	0	0.12552	1	13701	13701		3.0723	0.44103	1	689650	+		35921	15596	17778	17856	42004	42004					0.11013036868553172
VDRIHLIVSIS	11	Unmodified	_VDRIHLIVSIS_					0	0	0			REV__nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5	REV__nc|ENSG00000276547|Q9Y5G0-2|PCDHGB5	MSMS	GG20161007_CRH_Patient100_W632_01	3	626.3768798708916	2	626.374612	1250.73467	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.67	1	100.85	100.35	101.35	0.18047								0	0	0	0.63775	1	42360	42360		2.9952	0	1		+		35922	12018	17779	17857	42005	42005					0.11933323385619587
VDRIKRRLELQ	11	Unmodified	_VDRIKRRLELQ_					0	0	0			REV__ENST00000572253.5_1_17:78061710-78071334:+|nuORF	REV__ENST00000572253.5_1_17:78061710-78071334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4402343630791	2	713.436067	1424.85758	1.6666	0.001189	1.3858	0.00098869	3.0525	0.0021777	713.4370726235239	52.513	0.9479	52.839	52.496	53.444	0.32553					100	31	5	0	0	0	1.0393	1	22206	22206		0.35063	0	1	35978000	+		35923	10153	17780	17858	42006	42006					0.16214579836901066
VDRSVPRLPR	10	Unmodified	_VDRSVPRLPR_					0	0	0			REV__nc|ENSG00000178217|Q5SQS7-3|SH2D4B	REV__nc|ENSG00000178217|Q5SQS7-3|SH2D4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8569213747978	2	597.856921	1193.69929	2.2076	0.0013198	-1.2712	-0.00076	0.93636	0.00055981	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.89803	1	31355	31355		1.4819	0	1	2856000	+		35924	11240	17781	17859	42007	42007					0.11018705648439209
VDRSVPRLPR	10	Unmodified	_VDRSVPRLPR_					0	0	0			REV__nc|ENSG00000178217|Q5SQS7-3|SH2D4B	REV__nc|ENSG00000178217|Q5SQS7-3|SH2D4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8573486208916	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	0.89803	2	31268	31268;31477		1.4819	0	1	3279500	+		35925	11240	17781	17859	42008;42009	42008					0.11018705648439209
VDSIKRFII	9	Unmodified	_VDSIKRFII_					0	0	0			REV__ENSG00000140015|ENST00000322893|KCNH5	REV__ENSG00000140015|ENST00000322893|KCNH5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.8348266482353	2	545.834591	1089.65463	2.3257	0.0012695	-2.4224	-0.0013222	-0.096631	-5.2745E-05	545.8332333239152	83.206	0.98624	83.476	83.029	84.016	0.27029					59	31	3	0	0	0	0.76456	1	34771	34771		4.756	2.4533	1	1168900	+		35926	10115	17782	17860	42010	42010					0.11338881782421595
VDSIKRFII	9	Unmodified	_VDSIKRFII_					0	0	0			REV__ENSG00000140015|ENST00000322893|KCNH5	REV__ENSG00000140015|ENST00000322893|KCNH5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	545.834591	1089.65463	3.5797	0.0019539	-6.5858	-0.0035948	-3.0061	-0.0016408	545.8322854155892	82.088	0.40967	83.758	83.545	83.954	1.67	0.21461	-0.0042343	NaN	4.756	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207040	+		35927	10115	17782	17860							0.11338881782421595
VDSLKPNG	8	Unmodified	_VDSLKPNG_					0	0	0		ENSG00000177483|ENST00000316997|RBM44	ENSG00000177483|ENST00000316997|RBM44	ENSG00000177483|ENST00000316997|RBM44	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2246887087822	2	415.224342	828.434132	2.3406	0.00097187	-1.727	-0.0007171	0.61359	0.00025478	415.2237791813314	64.304	0.44266	66.232	66.012	66.455	1.928					25	13	3	0	0	0	0.89051	1	26993	26993		2.3027	0	1	757860			35928	4449	17783	17861	42011	42011					0.013052364549935191
VDSPVETK	8	Unmodified	_VDSPVETK_					0	0	0		nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1;nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	437.7300903201103	2	437.729458	873.444362	0.17784	7.7847E-05	1.0386	0.00045463	1.2165	0.00053248	437.72982531127496	15.886	0.59006	15.886	15.591	16.181	0					34	18	2	0	0	0	0.49046	1	6600	6600		48.346	2.3249	1	2244700			35929	2778	17784	17862	42012	42012					0.002577993895670261
VDSPVETK	8	Unmodified	_VDSPVETK_					0	0	0		nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1;nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	437.729458	873.444362	0.79176	0.00034658	0.71521	0.00031307	1.507	0.00065964	437.7292176131497	15.858	0.49609	15.988	15.776	16.272	0.13022	0.0010096	-3.9402E-05	NaN	48.346	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	530100			35930	2778	17784	17862							0.002577993895670261
VDSPVETK	8	Unmodified	_VDSPVETK_					0	0	0		nc|ENSG00000137601|Q96PY6-4|NEK1;nc|ENSG00000137601|Q96PY6-2|NEK1;nc|ENSG00000137601|Q96PY6-6|NEK1;nc|ENSG00000137601|Q96PY6|NEK1;ENSG00000137601|ENST00000507142|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	nc|ENSG00000137601|Q96PY6-4|NEK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	437.729458	873.444362	0.3117	0.00013644	0.24967	0.00010929	0.56137	0.00024573	437.72934397480844	15.19	0.23159	16.086	15.99	16.222	0.89665	0.099516	-0.00044696	NaN	48.346	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	300120			35931	2778	17784	17862							0.002577993895670261
VDSQKPTER	9	Unmodified	_VDSQKPTER_					0	0	0			REV__nc|ENSG00000073282|Q9H3D4-6|TP63	REV__nc|ENSG00000073282|Q9H3D4-6|TP63	MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2765380740166	2	530.275095	1058.53564	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.934	1	92.934	92.434	93.434	0								0	0	0	0.42693	1	38844	38844		4.3292	0	1		+		35932	14392	17785	17863	42013	42013					0.008710630869245506
VDSVDMYDK	9	Unmodified	_VDSVDMYDK_					0	0	0			REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	357.8266479372978	3	357.826952	1070.45903	-2.0931	-0.00074896	0.44887	0.00016062	-1.6442	-0.00058834	357.826981317549	15.988	0.43741	15.988	15.808	16.245	0					31	13	3	0	0	0	0.64457	1	6625	6625		9.544	1.3884	1	2109700	+		35933	15409	17786	17864	42014	42014					-0.07338496524585025
VDSVDMYDK	9	Unmodified	_VDSVDMYDK_					0	0	0			REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	357.826952	1070.45903	-2.0931	-0.00074896	0.44887	0.00016062	-1.6442	-0.00058834	357.826981317549	15.988	0.43741	15.988	15.808	16.245	0	-0.10617	0.0013242	NaN	9.544	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2109700	+		35934	15409	17786	17864							-0.07338496524585025
VDSVDMYDK	9	Unmodified	_VDSVDMYDK_					0	0	0			REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	REV__tr|A0A7D6VRG3|A0A7D6VRG3_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02045PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	357.826952	1070.45903	0.0793	2.8376E-05	-1.8737	-0.00067046	-1.7944	-0.00064208	357.8260731423005	15.95	0.55849	16.08	15.65	16.209	0.13022	-0.014308	-0.001169	NaN	9.544	28	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	323680	+		35935	15409	17786	17864							-0.07338496524585025
VDTRLRAL	8	Unmodified	_VDTRLRAL_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2885925173759	2	472.287808	942.561064	2.6521	0.0012526	0.44423	0.0002098	3.0963	0.0014624	472.28789374237107	77.933	0.67142	79.213	78.823	79.495	1.2809					71	21	5	0	0	0	0.87935	2	32807	32760;32807		9.3474	0	1	92817000			35936	5384	17787	17865	42015;42016	42016					0.08748582400005489
VDTRLRAL	8	Unmodified	_VDTRLRAL_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	472.287808	942.561064	2.4251	0.0011453	0.05505	2.6E-05	2.4801	0.0011713	472.28773622635293	78.785	1.0207	79.095	78.738	79.759	0.30933	-0.060889	-2.1115E-05	NaN	9.3474	85	32	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	172350000			35937	5384	17787	17865							0.08748582400005489
VDTRLRAL	8	Unmodified	_VDTRLRAL_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	472.287808	942.561064	1.5772	0.0007449	-0.45862	-0.0002166	1.1186	0.0005283	472.28749819848395	77.575	0.89394	79.327	78.977	79.871	1.7514	0.17136	-0.00050631	NaN	9.3474	71	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	106420000			35938	5384	17787	17865							0.08748582400005489
VDVPAHWLSI	10	Unmodified	_VDVPAHWLSI_					0	0	0			REV__tr|A0A7D6ZIG3|A0A7D6ZIG3_9CLOTPTSfructosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_06885PE=4SV=1	REV__tr|A0A7D6ZIG3|A0A7D6ZIG3_9CLOTPTSfructosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_06885PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.8122436404228	2	568.808574	1135.60259	1.3841	0.0007873	0.17931	0.00010199	1.5634	0.00088929	568.8086847303058	67.742	0.69257	67.742	67.288	67.98	0					56	21	4	0	0	0	0.846	1	28094	28094		7.2892	0	1	16025000	+		35939	15662	17788	17866	42017	42017					0.04021718368676375
VDWKDWKI	8	Unmodified	_VDWKDWKI_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A;ENST00000540037.5_2_12:6464995-6472854:-|nuORF	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.7461425662041	2	545.290017	1088.56548	2.8369	0.0015469	-0.65829	-0.00035896	2.1786	0.001188	545.7907179169478	63.968	0.46847	65.896	65.733	66.202	1.928					30	14	3	0	0	0	2.3239	1	26943	26943		13.508	9.5635	1	1993800			35940	1733	17789	17867	42018	42018					0.024740468228856116
VDYEPALCLPL	11	Unmodified	_VDYEPALCLPL_					0	0	0			REV__ENST00000492568.1_1_1:230399815-230400148:+|nuORF	REV__ENST00000492568.1_1_1:230399815-230400148:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8159667849541	2	616.815207	1231.61586	1.6065	0.00099091	-0.41933	-0.00025865	1.1872	0.00073226	616.8154895450856	83.795	0.4008	85.433	85.253	85.653	1.6379					24	12	3	0	0	0	0.70499	1	35162	35162		18.146	0	1	3752900	+		35941	13440	17790	17868	42019	42019					0.009317883657104176
VDYVGEKKQ	9	Unmodified	_VDYVGEKKQ_					0	0	0			REV__nc|ENSG00000173406|O75553-3|DAB1	REV__nc|ENSG00000173406|O75553-3|DAB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1066.237963855267	1	1065.5575	1064.55022	1.3063	0.001392	2.9319	0.0031242	4.2383	0.0045161	1066.5652756621744	37.234	0.12666	39.055	38.998	39.125	1.8202					7	5	2	0	0	0	0.11684	1	15640	15640		7.9102	0	1	1559700	+		35942	11096	17791	17869	42020	42020					0.020531352350417365
VDYYDWSFCQ	10	Unmodified	_VDYYDWSFCQ_					0	0	0		tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.8445922732353	3	442.509623	1324.50704	2.3119	0.001023	-0.035194	-1.5574E-05	2.2767	0.0010075	442.50919403686277	41.846	0.39558	43.172	42.94	43.336	1.3254					33	12	4	0	0	0	0.89588	1	17501	17501		1.9064	0.1641	1	3082200			35943	17235	17792	17870	42021	42021					-0.14223422604527514
VDYYDWSFCQ	10	Unmodified	_VDYYDWSFCQ_					0	0	0		tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	tr|A0A7D7A1A4|A0A7D7A1A4_9CLOTAldo/ketoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03245PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	442.509623	1324.50704	2.0394	0.00090245	0.19602	8.6742E-05	2.2354	0.00098919	442.84416229056745	41.305	0.2371	43.198	43.088	43.325	1.8927	0.013075	0.000177	NaN	1.9064	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1718100			35944	17235	17792	17870							-0.14223422604527514
VEAFARRA	8	Unmodified	_VEAFARRA_					0	0	0		XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant;ENSG00000122121|ENST00000371106|XPNPEP2	XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant	XPNPEP2|p.Q642Hfs*20|1|0.04|ENSG00000122121|chrX:129768386-129768389|ACAG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1747009158134	3	307.175126	918.503549	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.836	1	20.284	19.784	20.784	1.448								0	0	0	1.0178	1	7832	7832		0.45834	0	1				35945	17357	17793	17871	42022	42022					0.04103740194409511
VEAGDHAK	8	Unmodified	_VEAGDHAK_					0	0	0			REV__ENSG00000101138|ENST00000217109|CSTF1	REV__ENSG00000101138|ENST00000217109|CSTF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.7057067751884	2	413.706317	825.398081	-0.11058	-4.5749E-05	-3.0561	-0.0012643	-3.1667	-0.0013101	413.7053347758918	24.618	0.36662	24.618	24.398	24.765	0					29	11	4	0	0	0	0.87935	1	10297	10297		9.3474	0	1	1318100	+		35946	9024	17794	17872	42023	42023					-0.021602207218620606
VEAIVRIQPV	10	Unmodified	_VEAIVRIQPV_					0	0	0			REV__tr|A0A553SR85|A0A553SR85_NIACIMarRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00390PE=4SV=1	REV__tr|A0A553SR85|A0A553SR85_NIACIMarRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3441039919853	2	562.345323	1122.67609	1.2972	0.0007295	-2.4132	-0.0013571	-1.116	-0.00062757	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	0.87699	1	30428	30428		3.9444	0	1	3980400	+		35947	15148	17795	17873	42024	42024					0.11966266811100468
VEAKVHLISN	10	Unmodified	_VEAKVHLISN_					0	0	0			REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	REV__ENST00000478868.1_1_1:168054771-168056967:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	555.3191406130791	2	555.319306	1108.62406	0.73538	0.00040837	-1.2643	-0.00070208	-0.5289	-0.00029371	555.318685713747	103.78	0.70172	103.78	103.41	104.11	0					63	36	3	0	0	0	0.83797	1	43642	43642		8.1555	1.9497	1	76224000	+		35948	10193	17796	17874	42025	42025					0.07409103397390027
VEALVISLA	9	Unmodified	_VEALVISLA_					0	0	0		HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|108|1|anti-sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|108|1|anti-sense	HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|108|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	914.5528442263603	1	914.55571	913.548434	1.5892	0.0014534	-2.8211	-0.0025801	-1.2319	-0.0011266	914.5529704241136	67.185	0.5794	67.185	66.99	67.569	0					30	18	2	0	0	0	0.059546	1	27989	27989		64.236	3.8468	1	2353300			35949	7627	17797	17875	42026	42026					0.08820126217096913
VECGCCLCWCC	11	Unmodified	_VECGCCLCWCC_					0	0	0			REV__ENST00000534656.2_1_11:118868886-118869820:+|nuORF	REV__ENST00000534656.2_1_11:118868886-118869820:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	611.1884033083916	2	611.188036	1220.36152	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.567	1	40.403	39.903	40.903	1.8366								0	0	0	0.63775	1	16177	16177		0	0	1		+		35950	11491	17798	17876	42027	42027					-0.23984707584259013
VECMFEII	8	Unmodified	_VECMFEII_					0	0	0			REV__ENSG00000134698|ENST00000373210|AGO4	REV__ENSG00000134698|ENST00000373210|AGO4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.2357360720634	2	492.232464	982.450376	3.612	0.0017779	2.886	0.0014206	6.498	0.0031985	492.2339124981145	81.695	0.43253	82.928	82.687	83.119	1.2332					24	13	2	0	0	0	0.87803	1	34317	34317		10.183	0.83596	1	1464000	+		35951	9913	17799	17877	42028	42028					-0.04155141694764097
VEDDECDM	8	Unmodified	_VEDDECDM_					0	0	0			REV__ENSG00000159339|ENST00000375448|PADI4	REV__ENSG00000159339|ENST00000375448|PADI4	MSMS	GG20161007_CRH_Patient100_A02_01	1	319.1043273806572	3	319.105497	954.294663	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8911	1	6.8911	6.3911	7.3911	0								0	0	0	1.0178	1	2832	2832		0	0	1		+		35952	10571	17800	17878	42029	42029					-0.18431257006852775
VEDDVHTYI	9	Unmodified	_VEDDVHTYI_					0	0	0			REV__tr|A0A7D6VSI3|A0A7D6VSI3_9CLOTTyrosinerecombinaseXerCOS=ClostridiumintestinaleOX=36845GN=HZF06_10800PE=4SV=1	REV__tr|A0A7D6VSI3|A0A7D6VSI3_9CLOTTyrosinerecombinaseXerCOS=ClostridiumintestinaleOX=36845GN=HZF06_10800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7586547732353	2	545.756204	1089.49785	2.5779	0.0014069	3.2398	0.0017681	5.8177	0.003175	545.7585663433736	63.482	0.44602	65.426	65.152	65.598	1.9444					21	13	2	0	0	0	0.46905	1	26654	26654		16.942	3.4344	1	1362400	+		35953	15448	17801	17879	42030	42030					-0.04331447898584884
VEDGDMTA	8	Unmodified	_VEDGDMTA_					0	0	0			REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	837.3296996951103	1	837.329475	836.322198	1.3182	0.0011038	0.90107	0.00075449	2.2193	0.0018583	837.3303577365951	98.59	0.15644	98.59	98.504	98.66	0					9	5	2	0	0	0	0.87935	1	41217	41217		9.3474	0	1	14681000	+		35954	15810	17802	17880	42031	42031					-0.1025098568429712
VEDGDMTA	8	Unmodified	_VEDGDMTA_					0	0	0			REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	837.3307983279228	1	837.329475	836.322198	1.2934	0.001083	1.8818	0.0015757	3.1752	0.0026586	837.3307439894804	98.809	0.19093	98.809	98.686	98.877	0					17	6	4	0	0	0	0.88504	1	41317	41317		5.7604	0	1	97915000	+		35955	15810	17802	17880	42032	42032					-0.1025098568429712
VEDGDMTA	8	Unmodified	_VEDGDMTA_					0	0	0			REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	REV__tr|A0A7D7A0I9|A0A7D7A0I9_9CLOTYhgE/Pipdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00290PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	837.329475	836.322198	1.3182	0.0011038	0.90107	0.00075449	2.2193	0.0018583	837.3303577365951	98.59	0.15644	98.59	98.504	98.66	0	0.00062236	0.00061431	NaN	9.3474	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14681000	+		35956	15810	17802	17880							-0.1025098568429712
VEDGSDCL	8	Unmodified	_VEDGSDCL_					0	0	0		nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|O94854-4|MACF1	nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|O94854|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	837.3309814333916	1	837.329475	836.322198	2.7736	0.0023224	1.0116	0.00084705	3.7852	0.0031695	837.3302373608232	98.75	0.16777	98.83	98.707	98.875	0.080376					12	5	3	0	0	0	0.87106	1	41317	41317		14.582	4.3983	1	96290000			35957	7865	17803	17881	42033	42033					-0.10250985684308489
VEDGSDCL	8	Unmodified	_VEDGSDCL_					0	0	0		nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|O94854-4|MACF1	nc|ENSG00000127603|O94854|MACF1	nc|ENSG00000127603|O94854|MACF1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	837.329475	836.322198	1.2934	0.001083	1.8818	0.0015757	3.1752	0.0026586	837.3307439894804	98.809	0.19093	98.809	98.686	98.877	0	-0.010818	0.00036565	NaN	14.582	17	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97915000			35958	7865	17803	17881							-0.10250985684308489
VEDLARLPF	9	Unmodified	_VEDLARLPF_					0	0	0		ENST00000554628.5_1_14:89016776-89017810:-|nuORF	ENST00000554628.5_1_14:89016776-89017810:-|nuORF	ENST00000554628.5_1_14:89016776-89017810:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7908203005791	2	530.295299	1058.57605	2.3474	0.0012448	-3.5168	-0.0018649	-1.1693	-0.0006201	530.2950297125499	69.429	0.59795	71.282	70.948	71.546	1.853					47	18	3	0	0	0	0.59203	1	29218	29218		11.64	0	1	4563400			35959	7292	17804	17882	42034	42034					0.04910029477309763
VEDMGNLIENL	11	Unmodified	_VEDMGNLIENL_					0	0	0			REV__nc|ENSG00000145362|Q01484-5|ANK2	REV__nc|ENSG00000145362|Q01484-5|ANK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	623.8011352419853	2	623.802828	1245.5911	1.7419	0.0010866	-2.9144	-0.001818	-1.1725	-0.00073142	623.801165001452	78.706	0.40268	80.441	80.258	80.66	1.735					39	12	4	0	0	0	0.84637	2	32976	32976;33019		13.042	2.2185	1	6290100	+		35960	10273	17805	17883	42035;42036	42035					-0.02186891507631117
VEDNDSGVPV	10	Unmodified	_VEDNDSGVPV_					0	0	0		ENSG00000091127|ENST00000469408|PUS7;nc|ENSG00000091127|Q96PZ0-2|PUS7	ENSG00000091127|ENST00000469408|PUS7	ENSG00000091127|ENST00000469408|PUS7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7397338747978	2	515.738011	1029.46147	2.281	0.0011764	1.0927	0.00056353	3.3737	0.0017399	515.738383699605	64.575	0.35249	66.503	66.325	66.678	1.928					20	10	2	0	0	0	0.38174	1	27138	27138		34.402	3.7652	1	2342700			35961	1146	17806	17884	42037	42037					-0.0520832479528508
VEDTEANYF	9	Unmodified	_VEDTEANYF_					0	0	0			REV__nc|ENSG00000113597|A5PLN9-7|TRAPPC13	REV__nc|ENSG00000113597|A5PLN9-7|TRAPPC13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	544.7971679568291	2	544.232561	1086.45057	2.4558	0.0013365	3.5714	0.0019437	6.0272	0.0032802	544.2353118499524	76.402	0.12363	77.695	77.607	77.731	1.2938					5	3	2	0	0	0	0.11518	1	32055	32055		11.64	3.047	1	188930	+		35962	13577	17807	17885	42038	42038					-0.08919727169586622
VEDTLLCPI	9	Unmodified	_VEDTLLCPI_					0	0	0			REV__ENSG00000174564|ENST00000329582|IL20RB	REV__ENSG00000174564|ENST00000329582|IL20RB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.7935668826103	2	501.762443	1001.51033	3.603	0.0018078	-0.34984	-0.00017553	3.2531	0.0016323	501.76173810505423	73.632	0.31491	74.95	74.779	75.094	1.318					16	9	2	0	0	0	0.1006	1	30881	30881		21.747	0	1	555570	+		35963	11127	17808	17886	42039	42039					0.009638722400950428
VEDTLLCPI	9	Unmodified	_VEDTLLCPI_					0	0	0			REV__ENSG00000174564|ENST00000329582|IL20RB	REV__ENSG00000174564|ENST00000329582|IL20RB	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	501.762443	1001.51033	3.1738	0.0015925	-1.7195	-0.0008628	1.4542	0.00072969	502.2638111816786	74.648	0.15613	74.973	74.895	75.051	0.32464	-0.03986	-0.0010865	NaN	28.487	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	574980	+		35964	11127	17808	17886							0.009638722400950428
VEDYHWCR	8	Unmodified	_VEDYHWCR_					0	0	0			REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.2357665896416	2	554.237458	1106.46036	0.85561	0.00047421	-0.74225	-0.00041138	0.11337	6.2832E-05	554.2368429625067	30.79	0.30776	30.79	30.62	30.928	0					14	9	2	0	0	0	0.88587	1	12879	12879		5.2307	0	1	747950	+		35965	15251	17809	17887	42040	42040					-0.08860817645177121
VEDYHWCR	8	Unmodified	_VEDYHWCR_					0	0	0			REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	554.237458	1106.46036	0.85561	0.00047421	-0.74225	-0.00041138	0.11337	6.2832E-05	554.2368429625067	30.79	0.30776	30.79	30.62	30.928	0	-0.0071174	0.0013305	NaN	5.2307	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	747950	+		35966	15251	17809	17887							-0.08860817645177121
VEDYHWCR	8	Unmodified	_VEDYHWCR_					0	0	0			REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	REV__tr|A0A553STN8|A0A553STN8_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_05375PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	554.237458	1106.46036	1.1088	0.00061456	-5.0859	-0.0028188	-3.977	-0.0022042	554.2343337105871	30.518	0.20367	30.804	30.735	30.939	0.2859	0.0071174	-0.0034843	NaN	5.2307	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	594500	+		35967	15251	17809	17887							-0.08860817645177121
VEEEESDGL	9	Unmodified	_VEEEESDGL_					0	0	0		nc|ENSG00000134532|P35711-4|SOX5;nc|ENSG00000134532|P35711-2|SOX5;nc|ENSG00000134532|P35711-5|SOX5;ENSG00000134532|ENST00000451604|SOX5	nc|ENSG00000134532|P35711-4|SOX5	nc|ENSG00000134532|P35711-4|SOX5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	503.2926818728447	2	503.714202	1005.41385	2.71	0.0013651	0.62732	0.00031599	3.3374	0.0016811	503.71427604698226	73.717	0.43279	75.513	75.255	75.687	1.7962					32	13	4	0	0	0	0.11645	1	30971	30971		4.756	0	1	1457200			35968	2621	17810	17888	42041	42041					-0.08864023786134112
VEEFSRLAK	9	Unmodified	_VEEFSRLAK_					0	0	0		tr|A0A553SHN0|A0A553SHN0_NIACISmallribosomalsubunitproteinbS6OS=NialliacirculansOX=1397GN=rpsFPE=3SV=1	tr|A0A553SHN0|A0A553SHN0_NIACISmallribosomalsubunitproteinbS6OS=NialliacirculansOX=1397GN=rpsFPE=3SV=1	tr|A0A553SHN0|A0A553SHN0_NIACISmallribosomalsubunitproteinbS6OS=NialliacirculansOX=1397GN=rpsFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2002746462822	3	360.201229	1077.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.979	1	13.705	13.205	14.205	0.72639								0	0	0	0.42693	1	5389	5389		2.7352	0	1				35969	16162	17811	17889	42042	42042					0.0461712798901317
VEEKSLVTGA	10	Unmodified	_VEEKSLVTGA_					0	0	0			REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7830688357353	2	516.782222	1031.54989	0.88647	0.00045811	0.28495	0.00014726	1.1714	0.00060537	516.7823645846651	16.071	0.44028	16.071	15.932	16.373	0					34	13	3	0	0	0	0.74985	1	6762	6762		16.149	0	1	2247100	+		35970	15688	17812	17890	42043	42043					0.035377155151991246
VEEKSLVTGA	10	Unmodified	_VEEKSLVTGA_					0	0	0			REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	516.7824584841728	2	516.782222	1031.54989	0.52945	0.00027361	0.57637	0.00029786	1.1058	0.00057147	516.7825834338443	16.003	0.66356	16.133	15.839	16.503	0.13022					50	22	3	0	0	0	0.19531	1	6633	6633		49.554	3.8547	1	3308200	+		35971	15688	17812	17890	42044	42044					0.035377155151991246
VEEKSLVTGA	10	Unmodified	_VEEKSLVTGA_					0	0	0			REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	REV__tr|A0A7D6ZRE1|A0A7D6ZRE1_9CLOTBifunctional4-hydroxy-2-oxoglutaratealdolase/2-dehydro-3-deoxy-phosphogluconatealdolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03495PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7825195193291	2	516.782222	1031.54989	0.41161	0.00021271	-0.45463	-0.00023494	-0.043018	-2.2231E-05	516.7818994249119	15.309	0.44215	16.205	15.96	16.402	0.89664					48	16	4	0	0	0	0.74985	1	6290	6290		16.149	0	1	4545600	+		35972	15688	17812	17890	42045	42045					0.035377155151991246
VEELIIRKP	9	Unmodified	_VEELIIRKP_					0	0	0			REV__nc|ENSG00000165195|P37287-3|PIGA	REV__nc|ENSG00000165195|P37287-3|PIGA	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2283813357353	3	366.229008	1095.66519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.72	104.22	105.22	0.056801								0	0	0	0.42693	1	44192	44192		1.0715	0	1		+		35973	10771	17813	17891	42046	42046					0.12118864436843069
VEELKKKYG	9	Unmodified	_VEELKKKYG_					0	0	0		ENSG00000155368|ENST00000355857|DBI;nc|ENSG00000155368|P07108-3|DBI;nc|ENSG00000155368|P07108-2|DBI;nc|ENSG00000155368|P07108-4|DBI;nc|ENSG00000155368|P07108-5|DBI	ENSG00000155368|ENST00000355857|DBI	ENSG00000155368|ENST00000355857|DBI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3172485232353	2	547.316232	1092.61791	2.382	0.0013037	1.1061	0.00060536	3.488	0.001909	547.3170248469756	86.708	0.36869	86.708	86.519	86.888	0					24	13	3	0	0	0	0.77526	1	36099	36099		4.3292	0	1	5525800			35974	3418	17814	17892	42047	42047					0.0753058516584133
VEESCILTI	9	Unmodified	_VEESCILTI_					0	0	0			REV__tr|A0A7D6ZUY4|A0A7D6ZUY4_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01635PE=4SV=1	REV__tr|A0A7D6ZUY4|A0A7D6ZUY4_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01635PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.7606078982353	2	503.759901	1005.50525	3.1688	0.0015963	-1.7313	-0.00087216	1.4375	0.00072415	503.759228137251	70.493	0.35413	71.847	71.648	72.002	1.3536					21	10	3	0	0	0	0.24063	1	29594	29594		28.487	0	1	1702800	+		35975	15728	17815	17893	42048	42048					0.002715683775022626
VEFFGPGSH	9	Unmodified	_VEFFGPGSH_					0	0	0		tr|A0A553SFN0|A0A553SFN0_NIACIAcetylornithineaminotransferaseOS=NialliacirculansOX=1397GN=argDPE=3SV=1	tr|A0A553SFN0|A0A553SFN0_NIACIAcetylornithineaminotransferaseOS=NialliacirculansOX=1397GN=argDPE=3SV=1	tr|A0A553SFN0|A0A553SFN0_NIACIAcetylornithineaminotransferaseOS=NialliacirculansOX=1397GN=argDPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	326.8241454958916	3	326.15562	975.445031	2.0848	0.00067998	3.0696	0.0010012	5.1544	0.0016811	326.15664119074324	96.556	0.18169	96.661	96.573	96.755	0.105					9	5	2	0	0	0	0.11866	1	40404	40404		4.1895	0.59301	1	4160400			35976	16067	17816	17894	42049	42049					-0.043673611706935844
VEFGSVIFLQ	10	Unmodified	_VEFGSVIFLQ_					0	0	0			REV__tr|A0A553SP96|A0A553SP96_NIACIIsoleucine--tRNAligaseOS=NialliacirculansOX=1397GN=ileSPE=3SV=1	REV__tr|A0A553SP96|A0A553SP96_NIACIIsoleucine--tRNAligaseOS=NialliacirculansOX=1397GN=ileSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8116943240166	2	569.810782	1137.60701	2.3753	0.0013535	0.79918	0.00045538	3.1745	0.0018089	569.8112945987739	69.586	0.45846	70.952	70.701	71.159	1.3657					42	14	4	0	0	0	0.19223	2	29256	29168;29256		49.933	5.3201	1	7488400	+		35977	15078	17817	17895	42050;42051	42051					0.04371182791555839
VEFYEESV	8	Unmodified	_VEFYEESV_					0	0	0			REV__nc|ENSG00000188522|A6ND36-2|FAM83G	REV__nc|ENSG00000188522|A6ND36-2|FAM83G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4875976443291	3	334.486924	1000.43894	1.2243	0.00040952	-3.5562	-0.0011895	-2.3319	-0.00077998	334.4869845182941	59.767	0.40035	61.187	60.99	61.39	1.4196					37	12	4	0	0	0	0.88504	1	25056	25056		3.9444	0	1	3454400	+		35978	11571	17818	17896	42052	42052					-0.06125924192895127
VEGATQHQ	8	Unmodified	_VEGATQHQ_					0	0	0		ENST00000578759.1_1_17:60214444-60217453:-|nuORF;ENSG00000099821|ENST00000588649|POLRMT	ENST00000578759.1_1_17:60214444-60217453:-|nuORF	ENST00000578759.1_1_17:60214444-60217453:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2102538943291	2	435.209224	868.403895	0.87125	0.00037918	2.9622	0.0012892	3.8334	0.0016683	435.2102721294045	29.491	0.24334	31.289	31.143	31.386	1.7987					10	7	2	0	0	0	0.79422	1	12368	12368		21.747	2.4897	1	547990			35979	1218	17819	17897	42053	42053					-0.03557122210190755
VEGDIHPV	8	Unmodified	_VEGDIHPV_					0	0	0		tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	432.8856078982353	2	433.224342	864.434132	0.10469	4.5355E-05	0.90039	0.00039007	1.0051	0.00043542	433.2247477106498	16.979	0.78	16.979	16.691	17.471	0					57	24	3	0	0	0	2.3239	1	7022	7022		10.183	0	1	4701800			35980	17177	17820	17898	42054	42054					-0.0035076354498642104
VEGDIHPV	8	Unmodified	_VEGDIHPV_					0	0	0		tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	tr|A0A7D6ZWS5|A0A7D6ZWS5_9CLOTElectrontransferflavoproteinsubunitalphaOS=ClostridiumintestinaleOX=36845GN=HZF06_19085PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	432.8849365115166	2	433.224342	864.434132	0.32127	0.00013918	1.0656	0.00046164	1.3869	0.00060082	433.22473130153367	16.067	0.35903	17.106	16.957	17.316	1.0392					24	13	3	0	0	0	2.3239	1	6665	6665		10.183	0	1	1716900			35981	17177	17820	17898	42055	42055					-0.0035076354498642104
VEGGPPWAG	9	Unmodified	_VEGGPPWAG_					0	0	0			REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2123901247978	2	435.211235	868.407917	0.80444	0.0003501	1.5313	0.00066644	2.3357	0.0010165	435.21186116532516	31.43	0.49135	31.43	31.201	31.692	0					37	15	3	0	0	0	0.34572	1	13163	13163		23.148	3.7094	1	3604400	+		35982	13653	17821	17899	42056	42056					-0.031550327164836744
VEGGPPWAG	9	Unmodified	_VEGGPPWAG_					0	0	0			REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2115356326103	2	435.211235	868.407917	1.5924	0.00069305	0.68843	0.00029961	2.2809	0.00099267	435.21145161968496	31.079	0.32672	31.37	31.211	31.538	0.29086					26	10	3	0	0	0	0.34572	2	13027	13027;13079		23.148	3.7094	1	1559700	+		35983	13653	17821	17899	42057;42058	42057					-0.031550327164836744
VEGGPPWAG	9	Unmodified	_VEGGPPWAG_					0	0	0			REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	435.211235	868.407917	0.80444	0.0003501	1.5313	0.00066644	2.3357	0.0010165	435.21186116532516	31.43	0.49135	31.43	31.201	31.692	0	0.11106	0.0007627	NaN	23.148	37	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3604400	+		35984	13653	17821	17899							-0.031550327164836744
VEGGPPWAG	9	Unmodified	_VEGGPPWAG_					0	0	0			REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	REV__ENST00000524932.5_2_11:10828871-10830009:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	435.211235	868.407917	1.5924	0.00069305	0.68843	0.00029961	2.2809	0.00099267	435.21145161968496	31.079	0.32672	31.37	31.211	31.538	0.29086	0.050902	2.9054E-05	NaN	23.148	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1559700	+		35985	13653	17821	17899							-0.031550327164836744
VEGIGYDFI	9	Unmodified	_VEGIGYDFI_					0	0	0		nc|ENSG00000160200|P35520-2|CBS;ENSG00000160200|ENST00000398165|CBS;ENST00000486098.1_1_21:44482232-44483209:-|nuORF	nc|ENSG00000160200|P35520-2|CBS	nc|ENSG00000160200|P35520-2|CBS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7557250857353	2	506.752933	1011.49131	5.1122	0.0025906	0.42838	0.00021709	5.5406	0.0028077	506.7530790862856	89.84	0.53819	90.86	90.769	91.307	1.0199					25	16	3	0	0	0	0.27148	1	37917	37917		26.884	0	1	3635000			35986	3545	17822	17900	42059	42059					-0.01397341059282553
VEHGFCWFCHC	11	Unmodified	_VEHGFCWFCHC_					0	0	0			REV__L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|295|3|anti-sense	REV__L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|295|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.8432494997978	3	456.508794	1366.50455	0.5201	0.00023743	1.459	0.00066606	1.9791	0.00090349	456.84264278441947	11.497	1.3576	11.497	10.925	12.283	0					66	43	2	0	0	0	0.97905	1	4704	4704		5.0475	0.3316	1	2212800	+		35987	8332	17823	17901	42060	42060					-0.16403872814839815
VEHIPVVQI	9	Unmodified	_VEHIPVVQI_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MSMS	GG20161007_CRH_Patient100_W632_01	3	517.3054077029228	2	517.305667	1032.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.962	1	52.355	51.855	52.855	1.3938								0	0	0	0.29347	1	21335	21335		19.257	0	1				35988	779	17824	17902	42061	42061					0.08178619856994374
VEHSDSEDSEK	11	Unmodified	_VEHSDSEDSEK_					0	0	0		ENST00000468376.2_1_20:45867286-45947776:-|nuORF;ZMYND8-EYA2|1|fusion;nc|ENSG00000101040|Q9ULU4-22|ZMYND8;ZMYND8-EYA2|3|fusion;ZMYND8-EYA2|2|fusion;ZMYND8-EYA2|4|fusion;nc|ENSG00000101040|Q9ULU4-19|ZMYND8;ENSG00000101040|ENST00000471951|ZMYND8;nc|ENSG00000101040|Q9ULU4-11|ZMYND8;nc|ENSG00000101040|Q9ULU4-10|ZMYND8;nc|ENSG00000101040|Q9ULU4-13|ZMYND8;nc|ENSG00000101040|Q9ULU4|ZMYND8;nc|ENSG00000101040|Q9ULU4-20|ZMYND8;nc|ENSG00000101040|Q9ULU4-5|ZMYND8;nc|ENSG00000101040|Q9ULU4-9|ZMYND8;nc|ENSG00000101040|Q9ULU4-16|ZMYND8;nc|ENSG00000101040|Q9ULU4-12|ZMYND8;nc|ENSG00000101040|Q9ULU4-14|ZMYND8;nc|ENSG00000101040|Q9ULU4-18|ZMYND8;nc|ENSG00000101040|Q9ULU4-21|ZMYND8;nc|ENSG00000101040|Q9ULU4-8|ZMYND8;nc|ENSG00000101040|Q9ULU4-23|ZMYND8;nc|ENSG00000101040|Q9ULU4-15|ZMYND8;ZMYND8-EYA2|5|fusion;nc|ENSG00000101040|Q9ULU4-17|ZMYND8;ZMYND8-EYA2|7|fusion;nc|ENSG00000101040|Q9ULU4-6|ZMYND8;ZMYND8-EYA2|6|fusion;nc|ENSG00000101040|Q9ULU4-3|ZMYND8;ZMYND8-EYA2|8|fusion;nc|ENSG00000101040|Q9ULU4-4|ZMYND8;nc|ENSG00000101040|Q9ULU4-2|ZMYND8	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	ENST00000468376.2_1_20:45867286-45947776:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.5101501345634	3	421.177478	1260.5106	-0.37452	-0.00015774	-2.2971	-0.00096749	-2.6716	-0.0011252	421.17736776923607	13.963	0.9561	13.963	13.547	14.503	0					106	30	6	0	0	0	1.0084	1	5956	5956		1.3296	0	1	12038000			35989	6718	17825	17903	42062	42062					-0.10923081296982673
VEILANDQGNR	11	Unmodified	_VEILANDQGNR_					0	0	0		ENSG00000173110|ENST00000309758|HSPA6;nc|ENSG00000225217|P48741|HSPA7	ENSG00000173110|ENST00000309758|HSPA6	ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	615.3195678591728	2	614.817658	1227.62076	0.31101	0.00019121	2.3742	0.0014597	2.6852	0.0016509	614.8197907380584	17.596	0.211	18.494	18.399	18.61	0.89794					14	7	3	0	0	0	0.35387	1	7321	7321		28.234	0	1	796370			35990	4266	17826	17904	42063	42063					0.016058085526992727
VEILANDQGNR	11	Unmodified	_VEILANDQGNR_					0	0	0		ENSG00000173110|ENST00000309758|HSPA6;nc|ENSG00000225217|P48741|HSPA7	ENSG00000173110|ENST00000309758|HSPA6	ENSG00000173110|ENST00000309758|HSPA6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.8193237185478	2	614.817658	1227.62076	0.1813	0.00011146	1.259	0.00077403	1.4403	0.00088549	614.8184261725464	17.3	0.16758	18.602	18.502	18.67	1.3023					10	5	2	0	0	0	0.27409	1	7173	7173		34.222	0	1	1065800			35991	4266	17826	17904	42064	42064					0.016058085526992727
VEIPKNCV	8	Unmodified	_VEIPKNCV_					0	0	0		ENST00000502528.5_1_5:76728962-76747206:-|nuORF;nc|ENSG00000164253|Q9HAD4-2|WDR41;ENSG00000164253|ENST00000296679|WDR41	ENST00000502528.5_1_5:76728962-76747206:-|nuORF	ENST00000502528.5_1_5:76728962-76747206:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1647521853447	3	301.165239	900.473888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.652	1	66.652	66.152	67.152	0								0	0	0	1.0178	1	27761	27761		0.35063	0	1				35992	3766	17827	17905	42065	42065					0.019670401340590615
VEIPKNCV	8	Unmodified	_VEIPKNCV_					0	0	0		ENST00000502528.5_1_5:76728962-76747206:-|nuORF;nc|ENSG00000164253|Q9HAD4-2|WDR41;ENSG00000164253|ENST00000296679|WDR41	ENST00000502528.5_1_5:76728962-76747206:-|nuORF	ENST00000502528.5_1_5:76728962-76747206:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1645690798759	3	301.165239	900.473888	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.835	1	73.835	73.335	74.335	0								0	0	0	1.0178	1	30746	30746		0.35063	0	1				35993	3766	17827	17905	42066	42066					0.019670401340590615
VEIQGVIDP	9	Unmodified	_VEIQGVIDP_					0	0	0		ENST00000372291.3_1_20:44698963-44718582:-|nuORF	ENST00000372291.3_1_20:44698963-44718582:-|nuORF	ENST00000372291.3_1_20:44698963-44718582:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2686340212822	2	485.266207	968.517862	1.6271	0.00078959	1.8863	0.00091538	3.5135	0.001705	485.2669918192443	49.685	0.43888	51.663	51.381	51.819	1.9772					30	13	3	0	0	0	0.51189	1	20853	20853		14.838	0	1	2851100			35994	6139	17828	17906	42067	42067					0.032343478320512986
VEISSSKKL	9	Unmodified	_VEISSSKKL_					0	0	0			REV__tr|A0A553SNE9|A0A553SNE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24350PE=4SV=1	REV__tr|A0A553SNE9|A0A553SNE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_24350PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.7960082888603	2	495.795132	989.575711	2.1107	0.0010465	1.0684	0.00052969	3.1791	0.0015762	495.7955026591229	68.87	0.4398	69.193	68.998	69.438	0.32224					32	13	3	0	0	0	0.5697	1	28893	28893		12.532	0	1	3381800	+		35995	15053	17829	17907	42068	42068					0.08050609757481197
VEKDMAVI	8	Unmodified	_VEKDMAVI_					0	0	0		tr|A0A553SK99|A0A553SK99_NIACICellshape-determiningproteinMreCOS=NialliacirculansOX=1397GN=mreCPE=3SV=1	tr|A0A553SK99|A0A553SK99_NIACICellshape-determiningproteinMreCOS=NialliacirculansOX=1397GN=mreCPE=3SV=1	tr|A0A553SK99|A0A553SK99_NIACICellshape-determiningproteinMreCOS=NialliacirculansOX=1397GN=mreCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.7457153201103	2	452.744053	903.473554	2.1342	0.00096625	-0.22136	-0.00010022	1.9128	0.00086603	452.7441217435129	67.733	0.45257	69.111	68.85	69.303	1.3778					24	14	2	0	0	0	0.87431	1	28465	28465		12.532	0	1	2629100			35996	16279	17830	17908	42069	42069					0.017956204142024035
VEKEMESNRK	10	Unmodified	_VEKEMESNRK_					0	0	0		ENST00000445946.3_1_10:89620650-89620791:-|nuORF	ENST00000445946.3_1_10:89620650-89620791:-|nuORF	ENST00000445946.3_1_10:89620650-89620791:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	417.9212524294853	3	417.211688	1248.61324	0.28676	0.00011964	2.5129	0.0010484	2.7997	0.0011681	417.21290845917315	31.425	0.48441	31.425	31.049	31.534	0					18	15	2	0	0	0	0.12547	1	13071	13071		0.10794	0	1	539500			35997	6581	17831	17909	42070	42070					-0.0011266703922956367
VEKKKKGRP	9	Unmodified	_VEKKKKGRP_					0	0	0		ENST00000509549.5_1_22:19341546-19435194:-|nuORF;ENSG00000100084|ENST00000263208|HIRA	ENST00000509549.5_1_22:19341546-19435194:-|nuORF	ENST00000509549.5_1_22:19341546-19435194:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.2332641482353	3	357.232864	1068.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.966	1	62.966	62.466	63.466	0								0	0	0	0.42693	1	26252	26252		1.0715	0	1				35998	1237	17832	17910	42071	42071					0.1451710625085525
VEKLKHLLV	9	Unmodified	_VEKLKHLLV_					0	0	0		ENST00000008527.9_1_12:107393829-107395143:-|nuORF	ENST00000008527.9_1_12:107393829-107395143:-|nuORF	ENST00000008527.9_1_12:107393829-107395143:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2385436892509	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.856	1	90.856	90.356	91.356	0								0	0	0	0.42693	1	37973	37973		1.0715	0	1				35999	5494	17833	17911	42072	42072					0.15527758679127146
VEKMVQDEYPK	11	Unmodified	_VEKMVQDEYPK_					0	0	0			REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.8972656130791	3	455.895477	1364.6646	0.6043	0.0002755	1.1545	0.00052632	1.7588	0.00080182	455.89617215709416	13.903	0.21671	13.903	13.732	13.949	0					9	6	2	0	0	0	0.79576	1	5760	5760		15.538	4.4732	1	825070	+		36000	15439	17834	17912	42073	42073					-0.0031434306517894584
VEKMVQDEYPK	11	Unmodified	_VEKMVQDEYPK_					0	0	0			REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	455.895477	1364.6646	0.6043	0.0002755	1.1545	0.00052632	1.7588	0.00080182	455.89617215709416	13.903	0.21671	13.903	13.732	13.949	0	-0.0057109	-0.00049183	NaN	15.538	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	825070	+		36001	15439	17834	17912							-0.0031434306517894584
VEKMVQDEYPK	11	Unmodified	_VEKMVQDEYPK_					0	0	0			REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	REV__tr|A0A7D6VSB4|A0A7D6VSB4_9CLOTPeptidyl-prolylcis-transisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_22305PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	455.895477	1364.6646	0.84465	0.00038507	2.7859	0.0012701	3.6305	0.0016551	455.89669276964213	13.815	0.15468	13.915	13.843	13.998	0.099441	0.0057109	0.0017394	NaN	15.538	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	268620	+		36002	15439	17834	17912							-0.0031434306517894584
VEKNEYSSREA	11	Unmodified	_VEKNEYSSREA_					0	0	0			REV__nc|ENSG00000177354|Q711Q0-3|CEFIP	REV__nc|ENSG00000177354|Q711Q0-3|CEFIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	656.3137695193291	2	656.312406	1310.61026	0.54032	0.00035462	2.0828	0.0013669	2.6231	0.0017216	656.3138792179676	20.75	0.75603	20.961	20.44	21.196	0.21024					52	23	4	0	0	0	0.87205	1	8626	8626		11.495	2.1116	1	1534900	+		36003	11214	17835	17913	42074	42074					-0.03262218892382407
VEKNEYSSREA	11	Unmodified	_VEKNEYSSREA_					0	0	0			REV__nc|ENSG00000177354|Q711Q0-3|CEFIP	REV__nc|ENSG00000177354|Q711Q0-3|CEFIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.3141357302666	2	656.312406	1310.61026	0.6042	0.00039654	3.0339	0.0019912	3.6381	0.0023878	656.3143307343823	19.973	0.40584	21.032	20.794	21.2	1.0585					26	12	3	0	0	0	0.87205	1	8333	8333		11.495	0.6952	1	1789300	+		36004	11214	17835	17913	42075	42075					-0.03262218892382407
VEKPLDVL	8	Unmodified	_VEKPLDVL_					0	0	0		ENSG00000196267|ENST00000682614|ZNF836	ENSG00000196267|ENST00000682614|ZNF836	ENSG00000196267|ENST00000682614|ZNF836	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7730285525322	2	456.773668	911.532783	1.4838	0.00067776	-2.3165	-0.0010581	-0.83275	-0.00038038	456.7724436163955	70.619	0.54469	72.457	72.198	72.742	1.8378					46	17	4	0	0	0	0.88663	1	29698	29698		4.756	0	1	10109000			36005	4929	17836	17914	42076	42076					0.07347839700048553
VELIRWATFI	10	Unmodified	_VELIRWATFI_					0	0	0			REV__ENSG00000188352|ENST00000338382|FOCAD	REV__ENSG00000188352|ENST00000338382|FOCAD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	416.5770751833916	3	416.576408	1246.70739	0.30686	0.00012783	1.135	0.00047282	1.4419	0.00060065	416.57671086937944	32.269	0.68095	32.269	31.854	32.535	0					41	21	3	0	0	0	0.89588	1	13529	13529		1.9064	0	1	1699900	+		36006	11567	17837	17915	42077	42077					0.09390839845218579
VELLKKEI	8	Unmodified	_VELLKKEI_					0	0	0		nc|ENSG00000168256|Q9NYR9-2|NKIRAS2;ENSG00000168256|ENST00000393885|NKIRAS2;ENSG00000197885|ENST00000425478|NKIRAS1	nc|ENSG00000168256|Q9NYR9-2|NKIRAS2	nc|ENSG00000168256|Q9NYR9-2|NKIRAS2	MSMS	GG20161007_CRH_Patient100_A02_02	2	486.3100768923759	2	486.310418	970.606283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.447	1	90.656	90.156	91.156	0.20904								0	0	0	1.0178	1	37901	37901		14.582	0	1				36007	4023	17838	17916	42078	42078					0.11980388142512766
VELMMQQAILD	11	Unmodified	_VELMMQQAILD_					0	0	0			REV__ENST00000439215.1_1_1:43369124-43369580:+|nuORF	REV__ENST00000439215.1_1_1:43369124-43369580:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882934451103	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.429	1	92.597	92.097	93.097	0.16835								0	0	0	0.63775	1	38706	38706		0.08335	0	1		+		36008	13074	17839	17917	42079	42079					0.0027121603402520122
VELMMQQAILD	11	Unmodified	_VELMMQQAILD_					0	0	0			REV__ENST00000439215.1_1_1:43369124-43369580:+|nuORF	REV__ENST00000439215.1_1_1:43369124-43369580:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8890563845634	3	430.885925	1289.63594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.877	1	84.547	84.047	85.047	1.67								0	0	0	0.63775	1	34767	34767		0.08335	0	1		+		36009	13074	17839	17917	42080	42080					0.0027121603402520122
VELRKIARTR	10	Unmodified	_VELRKIARTR_					0	0	0			REV__tr|A0A553SHC0|A0A553SHC0_NIACIDNA-directedRNApolymerasesubunitbeta'OS=NialliacirculansOX=1397GN=rpoCPE=3SV=1	REV__tr|A0A553SHC0|A0A553SHC0_NIACIDNA-directedRNApolymerasesubunitbeta'OS=NialliacirculansOX=1397GN=rpoCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	414.5981933474541	3	414.598206	1240.77279	0.90302	0.00037439	-1.149	-0.00047639	-0.24602	-0.000102	414.5976715890155	92.458	0.54696	92.458	92.197	92.744	0					63	17	5	0	0	0	0.89803	1	38617	38617		0.62683	0	1	28313000	+		36010	14786	17840	17918	42081	42081					0.16203254090919472
VELRVLALP	9	Unmodified	_VELRVLALP_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.3249694705009	2	505.32386	1008.63317	1.7658	0.00089229	-0.291	-0.00014705	1.4748	0.00074524	505.32405081499314	71.21	2.1849	71.21	70.811	72.996	0					171	68	5	0	0	0	0.091139	6	29697	29538;29697;29775;29815;29893;30110		52.268	0	1	185410000			36011	4291	17841	17919	42082;42083;42084;42085;42086;42087	42083					0.12919496753693238
VELRVLALP	9	Unmodified	_VELRVLALP_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.3247253298759	2	505.32386	1008.63317	1.722	0.00087018	0.029607	1.4961E-05	1.7516	0.00088514	505.32429388891376	70.554	1.8866	70.876	70.53	72.417	0.32224					166	59	5	0	0	0	0.17276	3	29708	29708;29761;29882		36.127	0	1	226420000			36012	4291	17841	17919	42088;42089;42090	42088					0.12919496753693238
VELRVLALP	9	Unmodified	_VELRVLALP_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3249389529228	2	505.32386	1008.63317	2.353	0.001189	-1.3427	-0.0006785	1.0103	0.00051052	505.32407176962755	69.378	2.2451	70.743	70.35	72.595	1.3657					189	72	6	0	0	0	0.091139	3	29107	29107;29237;29277		52.268	0	1	850920000			36013	4291	17841	17919	42091;42092;42093	42091					0.12919496753693238
VELRVLALP	9	Unmodified	_VELRVLALP_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1009.639636218548	1	1009.64044	1008.63317	1.9827	0.0020018	-2.5628	-0.0025875	-0.58011	-0.0005857	1009.6375491753255	69.378	0.37804	70.743	70.53	70.908	1.3657					22	12	2	0	0	0	0.23535	1	29157	29157		29.082	1.4528	1	3901300			36014	4291	17841	17919	42094	42094					0.12919496753693238
VELRVLALP	9	Unmodified	_VELRVLALP_					0	0	0		ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	ENSG00000173621|ENST00000309602|LRFN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3250610232353	2	505.32386	1008.63317	1.3884	0.0007016	-0.20979	-0.00010601	1.1786	0.00059558	505.3246927802658	68.807	2.3248	70.66	70.281	72.606	1.853					225	74	6	0	0	0	0.091139	3	29053	28845;29053;29149		52.268	0	1	643420000			36015	4291	17841	17919	42095;42096;42097	42096					0.12919496753693238
VELVDIEPYDV	11	Unmodified	_VELVDIEPYDV_					0	0	0			REV__tr|A0A7D7A1W3|A0A7D7A1W3_9CLOTTriggerfactorOS=ClostridiumintestinaleOX=36845GN=tigPE=3SV=1	REV__tr|A0A7D7A1W3|A0A7D7A1W3_9CLOTTriggerfactorOS=ClostridiumintestinaleOX=36845GN=tigPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881713747978	3	430.886976	1289.6391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.75	1	110.8	110.3	111.3	0.047043								0	0	0	0.63775	1	47766	47766		0	0	1		+		36016	15837	17842	17920	42098	42098					0.005865056840320904
VELVDIEPYDV	11	Unmodified	_VELVDIEPYDV_					0	0	0			REV__tr|A0A7D7A1W3|A0A7D7A1W3_9CLOTTriggerfactorOS=ClostridiumintestinaleOX=36845GN=tigPE=3SV=1	REV__tr|A0A7D7A1W3|A0A7D7A1W3_9CLOTTriggerfactorOS=ClostridiumintestinaleOX=36845GN=tigPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8877136111259	3	430.886976	1289.6391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.85	1	110.9	110.4	111.4	0.047043								0	0	0	0.63775	1	47811	47811		0	0	1		+		36017	15837	17842	17920	42099	42099					0.005865056840320904
VELVYRCD	8	Unmodified	_VELVYRCD_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.7447692751884	2	498.744585	995.474617	2.4652	0.0012295	-2.2391	-0.0011167	0.22609	0.00011276	498.74322938528815	77.933	0.42079	79.213	79.015	79.435	1.2809					26	13	2	0	0	0	0.8873	1	32679	32679		4.3292	1.7518	1	5527600			36018	5010	17843	17921	42100	42100					-0.023301652168925102
VEMEQKLLMV	10	Unmodified	_VEMEQKLLMV_					0	0	0		nc|ENSG00000173230|Q14789-4|GOLGB1;nc|ENSG00000173230|Q14789-3|GOLGB1;nc|ENSG00000173230|Q14789|GOLGB1;ENSG00000173230|ENST00000614479|GOLGB1;nc|ENSG00000173230|Q14789-2|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	nc|ENSG00000173230|Q14789-4|GOLGB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	610.1822997927666	2	610.324885	1218.63522	1.7471	0.0010663	0.9587	0.00058512	2.7058	0.0016514	610.3260327988011	72.164	0.15967	72.489	72.355	72.515	0.32494					8	4	2	0	0	0	0.12539	1	30180	30180		1.8442	0	1	260620			36019	4276	17844	17922	42101	42101					0.034644213849787775
VEMQIKPII	9	Unmodified	_VEMQIKPII_					0	0	0		L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8199340701103	2	535.817553	1069.62055	2.8442	0.001524	2.158	0.0011563	5.0022	0.0026803	535.8183563264895	83.005	0.4298	84.215	83.948	84.378	1.2091					38	13	4	0	0	0	0.5697	1	34857	34857		12.532	3.1841	1	3546500			36020	7698	17845	17923	42102	42102					0.08852717299168944
VEMQIKPII	9	Unmodified	_VEMQIKPII_					0	0	0		L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	L1MB2_dup734|chr2:41391481-41393110:-|2.5038669870492565|0.0056028466714037|8.8|420.0|57|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	535.817553	1069.62055	2.9486	0.0015799	4.1297	0.0022128	7.0783	0.0037927	535.8196832997363	82.672	0.3012	84.342	84.113	84.415	1.67	0.19205	0.0021913	NaN	12.532	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5264200			36021	7698	17845	17923							0.08852717299168944
VEMTSYVLL	9	Unmodified	_VEMTSYVLL_					0	0	0		nc|ENSG00000126838|P20742-2|PZP;ENSG00000175899|ENST00000318602|A2M;ENSG00000126838|ENST00000261336|PZP	nc|ENSG00000126838|P20742-2|PZP	nc|ENSG00000126838|P20742-2|PZP	MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7795287966728	2	527.778093	1053.54163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.661	1	72.015	71.515	72.515	1.3536								0	0	0	0.36184	1	29651	29651		12.532	0	1				36022	2320	17846	17924	42103	42103					0.017004452742185094
VENARPKP	8	Unmodified	_VENARPKP_					0	0	0		NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1746093630791	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.316	1	76.316	75.816	76.816	0								0	0	0	1.0178	1	31770	31770		0.40072	0	1				36023	8040	17847	17925	42104	42104					0.04484320474557535
VENARPKP	8	Unmodified	_VENARPKP_					0	0	0		NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1758300662041	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.915	1	81.915	81.415	82.415	0								0	0	0	1.0178	1	34123	34123		0.40072	0	1				36024	8040	17847	17925	42105	42105					0.04484320474557535
VENARPKP	8	Unmodified	_VENARPKP_					0	0	0		NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	NUDT5|p.A153V|1|0.1|ENSG00000165609|chr10:12172794-12172794|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1751586794853	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.288	1	82.288	81.788	82.788	0								0	0	0	1.0178	1	34280	34280		0.40072	0	1				36025	8040	17847	17925	42106	42106					0.04484320474557535
VENAVVLTV	9	Unmodified	_VENAVVLTV_					0	0	0		chr20:33072793-33073576|228|22.43|0.1|7.79|+|0|BPIFB3,BPIFB3|1;ENSG00000186190|ENST00000375494|BPIFB3	chr20:33072793-33073576|228|22.43|0.1|7.79|+|0|BPIFB3,BPIFB3|1	chr20:33072793-33073576|228|22.43|0.1|7.79|+|0|BPIFB3,BPIFB3|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2784606814384	2	472.276575	942.538597	3.0252	0.0014287	-0.024703	-1.1667E-05	3.0005	0.0014171	472.27663054903593	62.123	0.44549	63.541	63.238	63.683	1.4177					30	13	3	0	0	0	0.10473	1	26082	26082		47.749	7.799	1	5536000			36026	245	17848	17926	42107	42107					0.06502938211701803
VENDPLTII	9	Unmodified	_VENDPLTII_					0	0	0			REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	REV__KIAA0319|p.H662Qfs*17|1|0.04|ENSG00000137261|chr6:24569908-24569908|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.2803222537041	2	507.279315	1012.54408	2.0313	0.0010305	1.743	0.00088418	3.7743	0.0019146	507.78190681491725	58.736	1.2961	60.154	59.909	61.205	1.4181					78	41	3	0	0	0	0.049839	1	24737	24737		68.081	8.0068	1	11402000	+		36027	10016	17849	17927	42108	42108					0.03830617003529824
VENGSGESDR	10	Unmodified	_VENGSGESDR_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	GG20161007_CRH_Patient100_A02_01	1	525.2278320193291	2	525.228342	1048.44213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.752	1	25.752	25.252	26.252	0								0	0	0	0.65997	1	10749	10749		4.5289	0.19963	1				36028	5406	17850	17928	42109	42109					-0.08015281086181858
VENGSGESDR	10	Unmodified	_VENGSGESDR_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2286254763603	2	525.228342	1048.44213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.31	1	23.487	22.987	23.987	1.177								0	0	0	0.65951	1	9324	9324		5.2969	1.3525	1				36029	5406	17850	17928	42110	42110					-0.08015281086181858
VENGSGESDR	10	Unmodified	_VENGSGESDR_					0	0	0		nc|ENSG00000256463|Q9BXA9-3|SALL3;nc|ENSG00000256463|Q9BXA9-4|SALL3;nc|ENSG00000256463|Q9BXA9-2|SALL3;ENSG00000256463|ENST00000537592|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	nc|ENSG00000256463|Q9BXA9-3|SALL3	MSMS	GG20161007_CRH_Patient100_W632_01	3	525.2280761599541	2	525.228342	1048.44213	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.696	1	24.932	24.432	25.432	1.2356								0	0	0	0.65997	1	9908	9908		4.5289	0.19963	1				36030	5406	17850	17928	42111	42111					-0.08015281086181858
VEPAPLRLS	9	Unmodified	_VEPAPLRLS_					0	0	0			REV__ENST00000580473.5_1_18:74701945-74778299:-|nuORF	REV__ENST00000580473.5_1_18:74701945-74778299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.2887756228447	2	491.290017	980.565481	1.1826	0.00058101	-1.1896	-0.00058443	-0.006967	-3.4228E-06	491.28995828802164	97.975	0.14827	97.975	97.907	98.056	0					9	5	3	0	0	0	0.7849	1	40957	40957		3.9444	0	1	17745000	+		36031	13997	17851	17929	42112	42112					0.07442046822893644
VEPAPLRLS	9	Unmodified	_VEPAPLRLS_					0	0	0			REV__ENST00000580473.5_1_18:74701945-74778299:-|nuORF	REV__ENST00000580473.5_1_18:74701945-74778299:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	491.2992126345634	2	491.290017	980.565481	1.1826	0.00058101	-1.1896	-0.00058443	-0.006967	-3.4228E-06	491.28995828802164	97.975	0.14827	97.975	97.907	98.056	0					9	5	3	0	0	0	0.11851	1	40982	40982		3.9444	0	1	17745000	+		36032	13997	17851	17929	42113	42113					0.07442046822893644
VEPSPFAK	8	Unmodified	_VEPSPFAK_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.7363159060478	2	437.737086	873.459619	0.6113	0.00026759	-4.1177	-0.0018025	-3.5064	-0.0015349	437.73532145693287	12.448	0.46002	12.538	12.433	12.893	0.089381					21	14	2	0	0	0	0.87701	1	5205	5205		10.824	2.9138	1	554310	+		36033	9078	17852	17930	42114	42114					0.01782710977431634
VEPSPFAK	8	Unmodified	_VEPSPFAK_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.7353393435478	2	437.737086	873.459619	-0.040849	-1.7881E-05	-3.1887	-0.0013958	-3.2295	-0.0014137	437.73553272271783	11.994	0.25007	12.688	12.602	12.852	0.69396					10	7	2	0	0	0	0.80889	1	5000	5000		20.454	4.6064	1	295860	+		36034	9078	17852	17930	42115	42115					0.01782710977431634
VEPYFDEYEMK	11	Unmodified	_VEPYFDEYEMK_					0	0	0		nc|ENSG00000107099|Q8NF50-4|DOCK8;nc|ENSG00000107099|Q8NF50-3|DOCK8;nc|ENSG00000107099|Q8NF50-2|DOCK8;ENSG00000107099|ENST00000432829|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	nc|ENSG00000107099|Q8NF50-4|DOCK8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.2754699587822	3	483.879604	1448.61698	0.63934	0.00030936	-1.7769	-0.00085981	-1.1376	-0.00055044	483.8782362072599	13.62	0.55411	13.62	13.424	13.978	0					25	17	3	0	0	0	0.14606	1	5746	5746		1.3296	0	1	474380			36035	1591	17853	17931	42116	42116					-0.0893804205604738
VEQIGENK	8	Unmodified	_VEQIGENK_					0	0	0		nc|ENSG00000127603|O94854|MACF1;ENST00000462496.5_1_1:39929295-39945768:+|nuORF;ENST00000497964.1_1_1:39924789-39929409:+|nuORF;nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;nc|ENSG00000127603|Q9UPN3-5|MACF1	nc|ENSG00000127603|O94854|MACF1;nc|ENSG00000127603|Q9UPN3|MACF1	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1723205447197	2	458.740357	915.46616	0.88754	0.00040715	-1.9603	-0.00089926	-1.0727	-0.00049211	458.74023306846755	14.173	0.43762	14.285	14.042	14.48	0.11295					19	13	2	0	0	0	2.3239	1	5924	5924		4.756	0	1	900650			36036	2341;7865	17854	17932	42117	42117					0.005046041381433497
VEQKHIQK	8	Unmodified	_VEQKHIQK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MSMS	GG20161007_CRH_Patient100_A02_02	2	337.1964294314384	3	337.197819	1008.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.346	1	14.459	13.959	14.959	0.11295								0	0	0	1.0178	1	5952	5952		22.736	3.4793	1			+	36037	335	17855	17933	42118	42118					0.0676856505442629
VEQKHIQK	8	Unmodified	_VEQKHIQK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MSMS	GG20161007_CRH_Patient100_A02_02	2	337.1966430544853	3	337.197819	1008.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.465	1	14.578	14.078	15.078	0.11295								0	0	0	1.0178	1	6001	6001		22.736	3.4793	1			+	36038	335	17855	17933	42119	42119					0.0676856505442629
VEQKHIQK	8	Unmodified	_VEQKHIQK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.1969787478447	3	337.197819	1008.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.876	1	14.602	14.102	15.102	0.72639								0	0	0	1.0178	1	5763	5763		26.268	6.9062	1			+	36039	335	17855	17933	42120	42120					0.0676856505442629
VEQKHIQK	8	Unmodified	_VEQKHIQK_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MSMS	GG20161007_CRH_Patient100_W632_02	4	337.1971618533134	3	337.197819	1008.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.749	1	14.577	14.077	15.077	0.82789								0	0	0	1.0178	1	5701	5701		22.736	3.4793	1			+	36040	335	17855	17933	42121	42121					0.0676856505442629
VERGRGRPRR	10	Unmodified	_VERGRGRPRR_					0	0	0			REV__ENST00000586048.1_1_19:44716825-44716909:+|nuORF	REV__ENST00000586048.1_1_19:44716825-44716909:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	620.4228393435478	2	619.868686	1237.72282	2.1579	0.0013376	0.80335	0.00049797	2.9613	0.0018356	619.8684705045962	82.822	0.33616	83.092	82.878	83.214	0.27029					17	10	2	0	0	0	0.1256	1	34576	34576		0.45834	0	1	401700	+		36041	14028	17856	17934	42122	42122					0.11346564205632603
VERGRGRPRR	10	Unmodified	_VERGRGRPRR_					0	0	0			REV__ENST00000586048.1_1_19:44716825-44716909:+|nuORF	REV__ENST00000586048.1_1_19:44716825-44716909:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	619.868686	1237.72282	2.5247	0.001565	1.5895	0.00098529	4.1143	0.0025503	619.8689541657053	82.984	0.3075	82.984	82.769	83.076	0	-0.053756	0.00030668	NaN	0.45834	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	303230	+		36042	14028	17856	17934							0.11346564205632603
VERHVKRR	8	Unmodified	_VERHVKRR_					0	0	0			REV__nc|nan|Q5JPI3-2|C3orf38	REV__nc|nan|Q5JPI3-2|C3orf38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3336059451103	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89176	1	28864	28864		0.79363	0.19213	1	3238400	+		36043	11266	17857	17935	42123	42123					0.1110158702535955
VERIQQLREEL	11	Unmodified	_VERIQQLREEL_					0	0	0			REV__ENST00000577662.1_1_17:63534239-63554825:-|nuORF	REV__ENST00000577662.1_1_17:63534239-63554825:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	706.8992187380791	2	706.89644	1411.77833	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.13	1	118.29	117.79	118.79	0.16237								0	0	0	0.63775	1	51007	51007		5.2969	0	1		+		36044	13989	17858	17936	42124	42124					0.08890888092105342
VERIWILSGM	10	Unmodified	_VERIWILSGM_					0	0	0		ENST00000380122.9_2_X:16861892-16862162:+|nuORF	ENST00000380122.9_2_X:16861892-16862162:+|nuORF	ENST00000380122.9_2_X:16861892-16862162:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.3283569216728	2	602.331359	1202.64816	2.3126	0.0013929	-3.9524	-0.0023807	-1.6398	-0.00098773	602.3286357785892	45.307	0.29243	46.672	46.497	46.79	1.3653					12	8	2	0	0	0	0.72878	1	18982	18982		17.113	4.5813	1	551670			36045	6220	17859	17937	42125	42125					0.05494620559397845
VERIWILSGM	10	Unmodified	_VERIWILSGM_					0	0	0		ENST00000380122.9_2_X:16861892-16862162:+|nuORF	ENST00000380122.9_2_X:16861892-16862162:+|nuORF	ENST00000380122.9_2_X:16861892-16862162:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	602.331359	1202.64816	2.048	0.0012336	-3.5439	-0.0021346	-1.4959	-0.00090102	602.8310693138585	44.668	0.31815	46.628	46.513	46.831	1.9596	-0.022238	0.00021547	NaN	17.113	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	410490			36046	6220	17859	17937							0.05494620559397845
VERKKGGIIYL	11	Unmodified	_VERKKGGIIYL_					0	0	0			REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	REV__nc|ENSG00000186231|Q96NJ5-3|KLHL32	MSMS	GG20161007_CRH_Patient100_W632_02	4	425.9314758181572	3	425.930962	1274.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.13486	1	0.87064	0.37064	1.3706	0.73579								0	0	0	0.63775	1	55	55		0	0	1		+		36047	11493	17860	17938	42126	42126					0.14466200282367936
VERLTNMQEF	10	Unmodified	_VERLTNMQEF_					0	0	0			REV__tr|A0A7D6ZZU2|A0A7D6ZZU2_9CLOTGlutaminesynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07620PE=3SV=1	REV__tr|A0A7D6ZZU2|A0A7D6ZZU2_9CLOTGlutaminesynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07620PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.8774597048759	3	422.876417	1265.60742	0.77079	0.00032595	1.6008	0.00067695	2.3716	0.0010029	422.8770718775211	30.141	1.0865	31.423	31.193	32.279	1.2825					80	34	4	0	0	0	0.80072	1	12692	12692		12.175	0.68004	1	11750000	+		36048	15802	17861	17939	42127	42127					-0.014757655508901735
VERNDIGRI	9	Unmodified	_VERNDIGRI_					0	0	0			REV__tr|A0A7D6ZVW5|A0A7D6ZVW5_9CLOTDNApolymeraseIVOS=ClostridiumintestinaleOX=36845GN=dinBPE=3SV=1	REV__tr|A0A7D6ZVW5|A0A7D6ZVW5_9CLOTDNApolymeraseIVOS=ClostridiumintestinaleOX=36845GN=dinBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2963744997978	2	536.298904	1070.58326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.451	1	65.858	65.358	66.358	1.4071								0	0	0	0.22909	1	27030	27030		24.021	0	1		+		36049	15737	17862	17940	42128	42128					0.050787620777555276
VERNKVKALH	10	Unmodified	_VERNKVKALH_					0	0	0		ENST00000478869.1_1_2:203760778-203765795:-|nuORF;ENSG00000138442|ENST00000261015|WDR12	ENST00000478869.1_1_2:203760778-203765795:-|nuORF	ENST00000478869.1_1_2:203760778-203765795:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3600952029228	2	597.359296	1192.70404	2.8574	0.0017069	-1.8396	-0.0010989	1.0178	0.00060798	597.3582428300301	85.216	0.44504	85.216	85.003	85.448	0					26	13	3	0	0	0	0.89803	1	35473	35473		1.6526	0.17072	1	1147500			36050	2830	17863	17941	42129	42129					0.11539589791209437
VESGVGVS	8	Unmodified	_VESGVGVS_					0	0	0		ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	ENSG00000198932|ENST00000537097|GPRASP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	367.1901733279228	2	367.189968	732.365384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.08	1	105.08	104.58	105.58	0								0	0	0	1.0178	1	44518	44518		5.7604	0	1				36051	5105	17864	17942	42130	42130					-0.011504278446977878
VESSMVNG	8	Unmodified	_VESSMVNG_					0	0	0		nc|ENSG00000134278|Q08AE8-3|SPIRE1;nc|ENSG00000134278|Q08AE8-5|SPIRE1;nc|ENSG00000134278|Q08AE8-2|SPIRE1;ENSG00000134278|ENST00000409402|SPIRE1;nc|ENSG00000134278|Q08AE8-4|SPIRE1	nc|ENSG00000134278|Q08AE8-3|SPIRE1	nc|ENSG00000134278|Q08AE8-3|SPIRE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	822.3691894412041	1	822.366195	821.358918	2.9755	0.002447	1.0806	0.00088865	4.0561	0.0033356	822.3668394899781	103.53	0.12465	103.71	103.64	103.76	0.18066					11	5	3	0	0	0	0.89008	1	43619	43619		2.5775	0	1	49877000			36052	2605	17865	17943	42131	42131					-0.058906890677235424
VETECNAPDVD	11	Unmodified	_VETECNAPDVD_					0	0	0			REV__tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	REV__tr|A0A7D6ZZG6|A0A7D6ZZG6_9CLOT4Fe-4Sdiclusterdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_20285PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.2447997927666	2	596.245343	1190.47613	1.618	0.00096471	-2.599	-0.0015497	-0.98107	-0.00058496	596.2440343609151	50.139	0.46897	50.469	50.263	50.732	0.33019					30	14	3	0	0	0	0.87205	1	21012	21012		11.495	0.67078	1	5489600	+		36053	15794	17866	17944	42132	42132					-0.1114862070946856
VETHWCAQ	8	Unmodified	_VETHWCAQ_					0	0	0		ENSG00000198700|ENST00000361565|IPO9;ENST00000479374.1_1_1:201816429-201819601:+|nuORF	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	486.7853881716728	2	487.213452	972.412351	1.8888	0.00092027	0.59027	0.00028759	2.4791	0.0012079	487.21382458261763	93.281	0.34842	93.281	93.107	93.455	0					13	10	2	0	0	0	2.3239	1	38918	38918		9.3474	0	1	568620			36054	5069	17867	17945	42133	42133					-0.0749589156522461
VETVDITLL	9	Unmodified	_VETVDITLL_					0	0	0			REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1002.56993407011	1	1002.57175	1001.56448	1.8523	0.0018571	-1.8039	-0.0018085	0.048448	4.8573E-05	1002.569987604326	74.889	0.28169	74.889	74.777	75.059	0					15	8	2	0	0	0	0.19075	1	31188	31188		34.102	5.6156	1	751950	+		36055	10511	17868	17946	42134	42134					0.06375787663341725
VETVDITLL	9	Unmodified	_VETVDITLL_					0	0	0			REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	REV__nc|ENSG00000156414|Q8NDG6-2|TDRD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1002.571459949017	1	1002.57175	1001.56448	2.8608	0.0028682	0.70236	0.00070416	3.5632	0.0035724	1002.572608207308	74.595	0.24934	74.92	74.74	74.989	0.32463					13	7	2	0	0	0	0.12174	1	31195	31195		42.095	0	1	637110	+		36056	10511	17868	17946	42135	42135					0.06375787663341725
VETVPAPL	8	Unmodified	_VETVPAPL_					0	0	0			REV__ENST00000315212.3_1_2:3605918-3605957:-|nuORF	REV__ENST00000315212.3_1_2:3605918-3605957:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2391845583916	2	413.239461	824.46437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.01	1	45.337	44.837	45.837	0.32674								0	0	0	1.0178	1	18900	18900		0.79363	0	1		+		36057	12383	17869	17947	42136	42136					0.04511595120175116
VEVKKRRHRLK	11	Unmodified	_VEVKKRRHRLK_					0	0	0		nc|ENSG00000121690|Q96QD5-2|DEPDC7;ENSG00000121690|ENST00000241051|DEPDC7;DEPDC7|p.F116Lfs*29|1|0.25|ENSG00000121690|chr11:33025930-33025930|C/-|frameshift_variant;ENST00000427755.2_1_11:33037501-33047701:+|nuORF;ENST00000532078.1_1_11:33037501-33049388:+|nuORF	nc|ENSG00000121690|Q96QD5-2|DEPDC7	nc|ENSG00000121690|Q96QD5-2|DEPDC7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	725.4698974490166	2	724.967868	1447.92118	1.2254	0.00088835	-2.604	-0.0018878	-1.3786	-0.00099945	724.9656510638915	32.465	0.53889	32.759	32.652	33.191	0.29431					29	17	2	0	0	0	1.0362	2	13623	13623;13794		3.2813	0.28607	1	3095200			36058	2136	17870	17948	42137;42138	42137					0.2151398506462101
VEVKKRRHRLK	11	Unmodified	_VEVKKRRHRLK_					0	0	0		nc|ENSG00000121690|Q96QD5-2|DEPDC7;ENSG00000121690|ENST00000241051|DEPDC7;DEPDC7|p.F116Lfs*29|1|0.25|ENSG00000121690|chr11:33025930-33025930|C/-|frameshift_variant;ENST00000427755.2_1_11:33037501-33047701:+|nuORF;ENST00000532078.1_1_11:33037501-33049388:+|nuORF	nc|ENSG00000121690|Q96QD5-2|DEPDC7	nc|ENSG00000121690|Q96QD5-2|DEPDC7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	725.4691650271416	2	724.967868	1447.92118	1.2452	0.00090272	-1.7218	-0.0012482	-0.4766	-0.00034552	725.4677215712402	32.968	0.26245	33.262	33.227	33.489	0.29431					10	8	2	0	0	0	1.0402	1	13849	13849		0.35063	0.35063	1	2322500			36059	2136	17870	17948	42139	42139					0.2151398506462101
VEVKKRRHRLK	11	Unmodified	_VEVKKRRHRLK_					0	0	0		nc|ENSG00000121690|Q96QD5-2|DEPDC7;ENSG00000121690|ENST00000241051|DEPDC7;DEPDC7|p.F116Lfs*29|1|0.25|ENSG00000121690|chr11:33025930-33025930|C/-|frameshift_variant;ENST00000427755.2_1_11:33037501-33047701:+|nuORF;ENST00000532078.1_1_11:33037501-33049388:+|nuORF	nc|ENSG00000121690|Q96QD5-2|DEPDC7	nc|ENSG00000121690|Q96QD5-2|DEPDC7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	725.4684936404228	2	724.967868	1447.92118	0.096798	7.0176E-05	-1.7672	-0.0012811	-1.6704	-0.001211	724.9667932594132	31.629	0.091488	32.911	32.835	32.926	1.2813					6	2	3	0	0	0	1.039	1	13264	13264		1.3295	0.13619	1	1318100			36060	2136	17870	17948	42140	42140					0.2151398506462101
VEVSQYSLL	9	Unmodified	_VEVSQYSLL_					0	0	0		ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1398193240166	2	519.279315	1036.54408	1.9273	0.0010008	-1.394	-0.00072388	0.53332	0.00027694	519.2784179207929	72.126	0.28406	72.126	71.953	72.237	0					17	8	3	0	0	0	0.10844	1	29992	29992		11.64	0	1	1599300			36061	4299	17871	17949	42141	42141					0.027266170035318282
VEVSQYSLL	9	Unmodified	_VEVSQYSLL_					0	0	0		ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	ENSG00000173769|ENST00000309765|TOPAZ1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1398803591728	2	519.279315	1036.54408	1.8751	0.00097368	0.35935	0.0001866	2.2344	0.0011603	519.2795770647832	71.664	0.31433	71.987	71.848	72.163	0.32359					23	9	3	0	0	0	0.10844	1	29958	29958		11.64	0	1	1689400			36062	4299	17871	17949	42142	42142					0.027266170035318282
VEVVVGAG	8	Unmodified	_VEVVVGAG_					0	0	0		ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	ENST00000478260.5_1_11:3108637-3108949:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2113525271416	2	365.210704	728.406855	0.14704	5.3699E-05	2.0905	0.00076346	2.2375	0.00081716	365.2114671636182	22.23	0.40192	23.846	23.61	24.011	1.6158					24	12	3	0	0	0	0.89176	1	9306	9306		0.79363	0	1	1547600			36063	6798	17872	17950	42143	42143					0.031787529146299676
VEWWKGHETLR	11	Unmodified	_VEWWKGHETLR_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	720.9993774294853	2	720.872768	1439.73098	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.348	1	95.75	95.25	96.25	0.40208								0	0	0	0.63774	1	40117	40117		7.1017	3.8204	1				36064	3385	17873	17951	42144	42144					0.028706536117397263
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_A02_01	1	654.7858154177666	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.434	1	50.434	49.934	50.934	0								0	0	0	0.65836	1	21039	21039		6.7232	0.51738	1				36065	3830	17874	17952	42145	42145					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_A02_01	1	654.7852661013603	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.354	1	51.354	50.854	51.854	0								0	0	0	0.65836	1	21417	21417		6.7232	0.51738	1				36066	3830	17874	17952	42146	42146					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_A02_01	1	654.7847778201103	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.144	1	59.144	58.644	59.644	0								0	0	0	0.65836	1	24664	24664		6.7232	0.99131	1				36067	3830	17874	17952	42147	42147					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	654.7863036990166	2	654.785158	1307.55576	1.6738	0.001096	0.11942	7.8197E-05	1.7933	0.0011742	654.7854788871695	46.543	1.6025	46.873	45.725	47.328	0.33034					82	53	2	0	0	0	0.85124	5	19146	19146;19325;19418;19602;19705		6.7232	0.99131	1	1060500			36068	3830	17874	17952	42148;42149;42150;42151;42152	42148					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_A02_02	2	654.7841674685478	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.895	1	55.216	54.716	55.716	0.32088								0	0	0	0.66052	1	22987	22987		3.5965	0	1				36069	3830	17874	17952	42153	42153					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_A02_02	2	654.7872192263603	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.279	1	86.525	86.025	87.025	0.24626								0	0	0	0.65836	1	36081	36081		6.7232	0.99131	1				36070	3830	17874	17952	42154	42154					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	654.7874633669853	2	654.785158	1307.55576	1.9977	0.0013081	1.6306	0.0010677	3.6284	0.0023758	654.7858442826175	41.341	0.63348	42.667	42.493	43.126	1.3254					24	19	2	0	0	0	0.88022	1	17347	17347		3.5965	0	1	515550			36071	3830	17874	17952	42155	42155					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_01	3	654.7846557497978	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.021	1	37.297	36.797	37.797	1.2762								0	0	0	0.66052	1	15122	15122		3.5965	0	1				36072	3830	17874	17952	42156	42156					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7854492068291	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.76	1	30.559	30.059	31.059	1.7987								0	0	0	0.65836	1	12045	12045		6.7232	0.99131	1				36073	3830	17874	17952	42157	42157					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7863036990166	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.365	1	31.164	30.664	31.664	1.7987								0	0	0	0.65836	1	12306	12306		6.7232	0.99131	1				36074	3830	17874	17952	42158	42158					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7856933474541	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.15	1	31.965	31.465	32.465	1.8151								0	0	0	0.66052	1	12639	12639		3.5965	0	1				36075	3830	17874	17952	42159	42159					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7861205935478	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.635	1	32.45	31.95	32.95	1.8151								0	0	0	0.66052	1	12841	12841		3.5965	0	1				36076	3830	17874	17952	42160	42160					-0.08571230763823223
VEYDYEYEAK	10	Unmodified	_VEYDYEYEAK_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MSMS	GG20161007_CRH_Patient100_W632_02	4	654.7867309451103	2	654.785158	1307.55576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.217	1	34.042	33.542	34.542	1.8246								0	0	0	0.66052	1	13504	13504		3.5965	0	1				36077	3830	17874	17952	42161	42161					-0.08571230763823223
VEYLNIYN	8	Unmodified	_VEYLNIYN_					0	0	0		ENSG00000174130|ENST00000508254|TLR6;nc|ENSG00000174130|Q9Y2C9-2|TLR6	ENSG00000174130|ENST00000508254|TLR6	ENSG00000174130|ENST00000508254|TLR6	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1738159060478	3	343.17468	1026.50221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.515	1	75.515	75.015	76.015	0								0	0	0	1.0178	1	31437	31437		0.40072	0	1				36078	4316	17875	17953	42162	42162					-0.009979386850091032
VEYNRWKL	8	Unmodified	_VEYNRWKL_					0	0	0			REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	REV__MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.3037597537041	2	554.300916	1106.58728	1.2179	0.0006751	2.9308	0.0016246	4.1488	0.0022997	554.304257033837	55.291	0.26373	56.7	56.616	56.88	1.4099					15	8	2	0	0	0	0.79422	1	23175	23175		21.747	3.6117	1	1519200	+		36079	10493	17876	17954	42163	42163					0.03824851571448562
VEYVFEKYYV	10	Unmodified	_VEYVFEKYYV_					0	0	0			REV__tr|A0A7D6ZW35|A0A7D6ZW35_9CLOTHADfamilyhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17450PE=4SV=1	REV__tr|A0A7D6ZW35|A0A7D6ZW35_9CLOTHADfamilyhydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17450PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	446.5658447146416	3	446.892062	1337.65436	0.25999	0.00011619	3.4281	0.001532	3.6881	0.0016482	446.89411041105245	11.833	0.71272	11.833	11.696	12.409	0					56	22	5	0	0	0	0.12547	1	4842	4842		1.9064	0.1641	1	130250000	+		36080	15741	17877	17955	42164	42164					-0.000965827280879239
VFAAIFVVWAV	11	Unmodified	_VFAAIFVVWAV_					0	0	0			REV__nc|ENSG00000144452|Q86UK0-2|ABCA12	REV__nc|ENSG00000144452|Q86UK0-2|ABCA12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3567382693291	2	611.35516	1220.69577	1.6158	0.00098784	2.0808	0.0012721	3.6966	0.00226	611.3559284151877	79.343	0.7719	81.078	80.877	81.649	1.735					38	24	2	0	0	0	1.0357	1	33261	33261		1.4819	0	1	1910900	+		36081	10250	17878	17956	42165	42165					0.09424642821886664
VFADSPILL	9	Unmodified	_VFADSPILL_					0	0	0			REV__ENST00000278071.6_1_10:106072175-106072370:-|nuORF	REV__ENST00000278071.6_1_10:106072175-106072370:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.7837707400322	2	487.781493	973.548434	2.565	0.0012512	2.763	0.0013478	5.3281	0.0025989	487.7828976231691	86.162	0.42467	86.162	85.914	86.339	0					26	13	3	0	0	0	0.5697	1	35970	35970		12.532	0	1	1914300	+		36082	12248	17879	17957	42166	42166					0.06060126217107609
VFAHFRKR	8	Unmodified	_VFAHFRKR_					0	0	0			REV__nc|ENSG00000172239|Q9H074-3|PAIP1	REV__nc|ENSG00000172239|Q9H074-3|PAIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.2163574099541	2	530.811785	1059.60902	2.0402	0.0010829	-1.1012	-0.00058454	0.93895	0.0004984	530.8108279553152	47.896	0.25175	47.896	47.776	48.028	0					16	7	3	0	0	0	2.3239	1	20054	20054		5.2307	0	1	675740	+		36083	11059	17880	17958	42167	42167					0.08159701110707829
VFAYRSLL	8	Unmodified	_VFAYRSLL_					0	0	0			REV__ENST00000569441.5_1_16:733170-733950:-|nuORF	REV__ENST00000569441.5_1_16:733170-733950:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2803832888603	2	484.781828	967.549102	2.3399	0.0011343	0.37033	0.00017953	2.7102	0.0013139	484.7836029867262	47.215	0.73461	48.597	48.283	49.017	1.3825					41	22	3	0	0	0	0.87655	1	19711	19711		11.114	0	1	1473900	+		36084	13955	17881	17959	42168	42168					0.06402965656809556
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.1076843142509	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.205	1	30.205	29.705	30.705	0								0	0	0	1.0178	1	12648	12648		0	0	1				36085	922	17882	17960	42169	42169					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.1089050173759	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.179	1	31.179	30.679	31.679	0								0	0	0	1.0178	1	13062	13062		0	0	1				36086	922	17882	17960	42170	42170					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1092712283134	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.19	1	30.473	29.973	30.973	1.2825								0	0	0	1.0178	1	12243	12243		0	0	1				36087	922	17882	17960	42171	42171					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1077758669853	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.398	1	30.68	30.18	31.18	1.2825								0	0	0	1.0178	1	12333	12333		0	0	1				36088	922	17882	17960	42172	42172					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1088134646416	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.772	1	31.055	30.555	31.555	1.2825								0	0	0	1.0178	1	12492	12492		0	0	1				36089	922	17882	17960	42173	42173					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1071349978447	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.952	1	31.235	30.735	31.735	1.2825								0	0	0	1.0178	1	12568	12568		0	0	1				36090	922	17882	17960	42174	42174					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1070434451103	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.104	1	31.386	30.886	31.886	1.2825								0	0	0	1.0178	1	12633	12633		0	0	1				36091	922	17882	17960	42175	42175					-0.2433137642174188
VFCCCCCC	8	Unmodified	_VFCCCCCC_					0	0	0		ENST00000318348.8_1_12:110289098-110289272:-|nuORF;ENST00000510457.1_1_4:48091737-48136211:-|nuORF;ENSG00000074966|ENST00000264316|TXK	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	ENST00000318348.8_1_12:110289098-110289272:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.1086913943291	2	442.108526	882.202499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.227	1	31.51	31.01	32.01	1.2825								0	0	0	1.0178	1	12685	12685		0	0	1				36092	922	17882	17960	42176	42176					-0.2433137642174188
VFCCEVLIA	9	Unmodified	_VFCCEVLIA_					0	0	0			REV__tr|A0A7D6VTH7|A0A7D6VTH7_9CLOTN-acetylmuramoyl-L-alanineamidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10915PE=4SV=1	REV__tr|A0A7D6VTH7|A0A7D6VTH7_9CLOTN-acetylmuramoyl-L-alanineamidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10915PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	996.4946777224541	1	996.489287	995.48201	4.0213	0.0040072	-0.1291	-0.00012865	3.8922	0.0038786	996.4895797844546	61.735	0.37413	63.153	62.896	63.27	1.4177					15	11	2	0	0	0	0.68551	1	25893	25893		7.9102	0	1	708670	+		36093	15489	17883	17961	42177	42177					-0.0159114894082677
VFENPTMVQF	10	Unmodified	_VFENPTMVQF_					0	0	0		nc|ENSG00000014919|Q7KZN9-2|COX15;ENSG00000014919|ENST00000016171|COX15	nc|ENSG00000014919|Q7KZN9-2|COX15	nc|ENSG00000014919|Q7KZN9-2|COX15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	606.3358032107353	2	606.291899	1210.56925	3.0382	0.001842	-1.821	-0.0011041	1.2172	0.00073798	606.2897511348292	64.997	0.25368	66.396	66.255	66.508	1.3989					10	7	2	0	0	0	0.12448	1	27280	27280		12.241	6.5088	1	508440			36094	595	17884	17962	42178	42178					-0.027616514655392166
VFERMDMPMN	10	Unmodified	_VFERMDMPMN_					0	0	0			REV__ENSG00000198734|ENST00000367797|F5	REV__ENSG00000198734|ENST00000367797|F5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	635.2773925662041	2	635.274869	1268.53518	1.4448	0.00091782	2.0798	0.0013213	3.5246	0.0022391	635.2762841951045	64.734	0.5042	66.662	66.422	66.926	1.928					52	15	5	0	0	0	0.81324	1	27194	27194		10.824	0.024421	1	16599000	+		36095	11732	17885	17963	42179	42179					-0.08834139220448378
VFFKELIQEF	10	Unmodified	_VFFKELIQEF_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.3541137576103	2	650.352814	1298.69108	2.2133	0.0014395	0.18419	0.00011979	2.3975	0.0015592	650.3520940527537	77.335	0.50807	78.616	78.41	78.918	1.2809					40	15	4	0	0	0	0.062229	3	32515	32430;32476;32515		166.77	94.847	1	8576700			36096	2965	17886	17964	42180;42181;42182	42182					0.05367713888472281
VFFKELIQEF	10	Unmodified	_VFFKELIQEF_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3532592654228	2	650.352814	1298.69108	2.153	0.0014002	-0.7682	-0.0004996	1.3848	0.00090062	650.3519079904224	76.802	0.44696	78.569	78.321	78.768	1.7672					41	13	4	0	0	0	0.049285	3	32257	32170;32213;32257		128.57	83.328	1	7754600			36097	2965	17886	17964	42183;42184;42185	42185					0.05367713888472281
VFFKGFKW	8	Unmodified	_VFFKGFKW_					0	0	0		ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	353.8650695681572	3	353.532251	1057.57492	0.004154	1.4686E-06	-0.64545	-0.00022819	-0.6413	-0.00022672	353.5323307115263	53.665	0.72039	55.066	54.92	55.64	1.4005					57	26	3	0	0	0	0.7528	3	22439	22439;22489;22543		25.399	13.225	1	6565100			36098	2057	17887	17965	42186;42187;42188	42186					0.048438598990969695
VFFKGFKW	8	Unmodified	_VFFKGFKW_					0	0	0		ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	353.5309020876884	3	353.532251	1057.57492	0.2914	0.00010302	-1.1627	-0.00041106	-0.87131	-0.00030804	353.5319390022823	53.124	0.74797	55.094	54.91	55.658	1.9697					55	31	2	0	0	0	0.7528	2	22254	22254;22381		25.399	11.784	1	4110100			36099	2057	17887	17965	42189;42190	42189					0.048438598990969695
VFFKGFKWGF	10	Unmodified	_VFFKGFKWGF_					0	0	0		ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.5619689822197	3	421.56221	1261.6648	1.8972	0.0007998	1.25	0.00052696	3.1473	0.0013268	421.561984511956	67.748	0.63776	69.126	68.946	69.583	1.3778					48	20	3	0	0	0	0.24174	1	28453	28453		30.703	23.666	1	1782900			36100	2057	17888	17966	42191	42191					0.04443489507639242
VFFKGFKWGF	10	Unmodified	_VFFKGFKWGF_					0	0	0		ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	ENSG00000119013|ENST00000237889|NDUFB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.8973876833916	3	421.56221	1261.6648	1.2418	0.00052352	1.3036	0.00054955	2.5455	0.0010731	421.89680383704047	67.162	0.67616	69.051	68.892	69.568	1.8889					50	21	3	0	0	0	0.32206	1	28193	28193		26.021	16.256	1	1902100			36101	2057	17888	17966	42192	42192					0.04443489507639242
VFFKGLDLL	9	Unmodified	_VFFKGLDLL_					0	0	0			REV__ENST00000256689.9_1_12:46766351-46766390:-|nuORF	REV__ENST00000256689.9_1_12:46766351-46766390:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3151733279228	2	526.312961	1050.61137	1.5482	0.00081484	2.2625	0.0011908	3.8107	0.0020056	526.3142176321041	97.81	0.093857	97.81	97.752	97.846	0					6	2	3	0	0	0	0.51832	1	40894	40894		14.582	0	1	5376400	+		36102	12167	17889	17967	42193	42193					0.08808692005163721
VFFYLNVI	8	Unmodified	_VFFYLNVI_					0	0	0			REV__tr|A0A7D6VZC1|A0A7D6VZC1_9CLOTStageIIsporulationproteinROS=ClostridiumintestinaleOX=36845GN=spoIIRPE=4SV=1	REV__tr|A0A7D6VZC1|A0A7D6VZC1_9CLOTStageIIsporulationproteinROS=ClostridiumintestinaleOX=36845GN=spoIIRPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2907897830009	2	507.786579	1013.5586	2.093	0.0010628	-2.4901	-0.0012645	-0.3971	-0.00020164	508.28810959354576	41.167	0.34736	43.059	42.832	43.179	1.8927					21	10	3	0	0	0	0.86202	1	17294	17294		15.768	1.1865	1	1238000	+		36103	15566	17890	17968	42194	42194					0.05236733942331284
VFGALIFWIVT	11	Unmodified	_VFGALIFWIVT_					0	0	0		ENSG00000071967|ENST00000321348|CYBRD1;nc|ENSG00000071967|Q53TN4-3|CYBRD1	ENSG00000071967|ENST00000321348|CYBRD1	ENSG00000071967|ENST00000321348|CYBRD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3694946169853	2	633.368267	1264.72198	2.0542	0.001301	0.56859	0.00036012	2.6227	0.0016612	633.3684378733224	79.204	1.5094	79.204	78.377	79.887	0					111	48	3	0	0	0	1.0357	1	33043	33043		1.4819	0	1	2722600			36104	875	17891	17969	42195	42195					0.10020911993342452
VFGLAVVV	8	Unmodified	_VFGLAVVV_					0	0	0		nc|ENSG00000164244|Q96M27-5|PRRC1;ENSG00000164244|ENST00000296666|PRRC1;nc|ENSG00000164244|Q96M27-3|PRRC1;nc|ENSG00000164244|Q96M27-2|PRRC1;nc|ENSG00000164244|Q96M27-4|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	nc|ENSG00000164244|Q96M27-5|PRRC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	803.5035888552666	1	803.502552	802.495276	1.8642	0.0014979	0.33729	0.00027101	2.2015	0.0017689	803.5028774112482	77.048	0.34335	77.048	76.845	77.189	0					17	10	2	0	0	0	0.67839	1	32071	32071		32.454	0	1	824430			36105	3763	17892	17970	42196	42196					0.08612793225097448
VFHEEFIHYLK	11	Unmodified	_VFHEEFIHYLK_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG;ENST00000513226.1_1_4:17812700-17814869:+|nuORF	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.9247314333916	3	487.922355	1460.74524	1.7871	0.00087195	3.0628	0.0014944	4.8498	0.0023663	487.9235313531964	71.803	0.68737	73.144	72.842	73.53	1.3415					65	21	5	0	0	0	0.85989	1	30178	30178		12.228	2.4633	1	10081000			36106	1680	17893	17971	42197	42197					0.03329306040041047
VFHLDYSEI	9	Unmodified	_VFHLDYSEI_					0	0	0			REV__ENST00000461241.1_1_22:31523357-31529733:+|nuORF	REV__ENST00000461241.1_1_22:31523357-31529733:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8049194216728	2	561.776939	1121.53933	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.048	1	71.886	71.386	72.386	1.8378								0	0	0	0.29162	1	29385	29385		19.439	1.304	1		+		36107	11452	17894	17972	42198	42198					-0.016582671392370685
VFHLLGVDTL	10	Unmodified	_VFHLLGVDTL_					0	0	0		ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20942916-20943195:+|nuORF;ENST00000554056.5_1_14:20942916-20944757:+|nuORF	ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3203002810478	2	557.318774	1112.623	1.6203	0.00090305	-1.2148	-0.00067703	0.40555	0.00022602	557.3179971335703	71.758	0.40339	73.099	72.812	73.216	1.3415					26	12	3	0	0	0	0.846	1	30103	30103		7.2892	1.9923	1	1429100			36108	5087	17895	17973	42199	42199					0.07118889028470221
VFHLLGVDTL	10	Unmodified	_VFHLLGVDTL_					0	0	0		ENSG00000198805|ENST00000361505|PNP;ENST00000557229.5_1_14:20942916-20943195:+|nuORF;ENST00000554056.5_1_14:20942916-20944757:+|nuORF	ENSG00000198805|ENST00000361505|PNP	ENSG00000198805|ENST00000361505|PNP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	557.318774	1112.623	1.4706	0.00081959	-2.9199	-0.0016273	-1.4493	-0.00080772	557.3178615596836	71.257	0.5602	73.081	72.758	73.318	1.824	-0.0091587	-0.0013589	NaN	7.2892	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1231700			36109	5087	17895	17973							0.07118889028470221
VFHLRSPL	8	Unmodified	_VFHLRSPL_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7882873415947	2	484.787444	967.560336	1.4477	0.00070184	-0.12058	-5.8454E-05	1.3271	0.00064338	484.78730632566817	24.919	0.29984	26.179	26.046	26.346	1.2594					24	9	4	0	0	0	0.88587	1	10448	10448		5.2307	0	1	3435400			36110	2700	17896	17974	42200	42200					0.07525787750932977
VFHLRSPL	8	Unmodified	_VFHLRSPL_					0	0	0		ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	ENSG00000136011|ENST00000388887|STAB2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	484.787444	967.560336	1.4477	0.00070184	-0.12058	-5.8454E-05	1.3271	0.00064338	484.78730632566817	24.919	0.29984	26.179	26.046	26.346	1.2594	0.02978	-0.00075933	NaN	5.2307	24	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3435400			36111	2700	17896	17974							0.07525787750932977
VFHPSQDLVF	10	Unmodified	_VFHPSQDLVF_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8069335818291	2	594.806031	1187.59751	0.70608	0.00041998	0.513	0.00030513	1.2191	0.00072512	594.8062017724743	51.106	0.36428	52.5	52.316	52.68	1.3938					42	11	5	0	0	0	0.066517	2	21407	21357;21407		71.922	35.795	1	8208200			36112	1697	17897	17975	42201;42202	42202					0.011214145060193914
VFHPSQDLVF	10	Unmodified	_VFHPSQDLVF_					0	0	0		ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8067504763603	2	594.806031	1187.59751	0.82453	0.00049044	-0.25759	-0.00015322	0.56694	0.00033722	594.8054847229952	50.515	0.38923	52.49	52.308	52.697	1.9753					33	12	4	0	0	0	0.10797	2	21172	21124;21172		62.573	24.599	1	8029700			36113	1697	17897	17975	42203;42204	42204					0.011214145060193914
VFHRVQRK	8	Unmodified	_VFHRVQRK_					0	0	0		TNFAIP3|p.T604Ifs*74|1|0.07|ENSG00000118503|chr6:137879255-137879256|-/TTACTTTGAACTTGTTCAG|frameshift_variant	TNFAIP3|p.T604Ifs*74|1|0.07|ENSG00000118503|chr6:137879255-137879256|-/TTACTTTGAACTTGTTCAG|frameshift_variant	TNFAIP3|p.T604Ifs*74|1|0.07|ENSG00000118503|chr6:137879255-137879256|-/TTACTTTGAACTTGTTCAG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1635009646416	2	535.322517	1068.63048	2.2706	0.0012155	1.4135	0.00075667	3.6841	0.0019722	535.3226443536076	44.579	0.2234	46.539	46.415	46.639	1.9596					11	6	2	0	0	0	2.3239	1	18665	18665		2.8892	0	1	826930			36114	16029	17898	17976	42205	42205					0.09891086139418803
VFIDKQTNL	9	Unmodified	_VFIDKQTNL_					0	0	0		nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000149187|Q92879-5|CELF1	nc|ENSG00000149187|Q92879-5|CELF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3015624880791	2	539.300581	1076.58661	0.95449	0.00051475	0.70006	0.00037754	1.6545	0.0008923	539.3010602618582	30.081	0.33808	31.363	31.164	31.502	1.2825					28	10	4	0	0	0	0.023685	2	12606	12606;12655		96.367	38.895	1	5019400			36115	687	17899	17977	42206;42207	42206					0.05138012131760661
VFIDKQTNL	9	Unmodified	_VFIDKQTNL_					0	0	0		nc|ENSG00000149187|Q92879-5|CELF1;nc|ENSG00000149187|Q92879-2|CELF1;nc|ENSG00000149187|Q92879-3|CELF1;nc|ENSG00000149187|Q92879-6|CELF1;nc|ENSG00000149187|Q92879|CELF1;nc|ENSG00000048740|O95319-5|CELF2;nc|ENSG00000048740|O95319-2|CELF2;nc|ENSG00000048740|O95319|CELF2;nc|ENSG00000048740|O95319-4|CELF2;nc|ENSG00000149187|Q92879-4|CELF1;ENSG00000149187|ENST00000687097|CELF1;nc|ENSG00000048740|O95319-3|CELF2;ENSG00000048740|ENST00000633077|CELF2	nc|ENSG00000149187|Q92879-5|CELF1	nc|ENSG00000149187|Q92879-5|CELF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3010742068291	2	539.300581	1076.58661	0.90344	0.00048723	0.4955	0.00026722	1.3989	0.00075445	539.3006059726827	29.661	0.27305	31.459	31.295	31.568	1.7987					23	8	4	0	0	0	0.0070766	2	12450	12401;12450		114.19	49.95	1	4407900			36116	687	17899	17977	42208;42209	42209					0.05138012131760661
VFIIFFSI	8	Unmodified	_VFIIFFSI_					0	0	0		tr|A0A553SR00|A0A553SR00_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_00010PE=4SV=1	tr|A0A553SR00|A0A553SR00_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_00010PE=4SV=1	tr|A0A553SR00|A0A553SR00_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_00010PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1960327029228	3	329.196757	984.568441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.69	1	101.69	101.19	102.19	0								0	0	0	1.0178	1	42583	42583		0.40072	0	1				36117	16537	17900	17978	42210	42210					0.07553921947715025
VFINVPTVSF	10	Unmodified	_VFINVPTVSF_					0	0	0		nc|ENSG00000172828|Q6UWW8-2|CES3;CES3|p.S447Ifs*13|1|0.06|ENSG00000172828|chr16:66972402-66972403|-/A|frameshift_variant;ENSG00000172828|ENST00000303334|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8156616091728	2	561.813325	1121.6121	3.7639	0.0021146	1.1914	0.00066935	4.9553	0.0027839	561.8132942813495	82.384	0.28732	83.597	83.411	83.698	1.2125					20	8	3	0	0	0	0.19223	2	34552	34552;34598		49.933	22.304	1	1340900			36118	150	17901	17979	42211;42212	42211					0.05615486654187407
VFINVPTVSF	10	Unmodified	_VFINVPTVSF_					0	0	0		nc|ENSG00000172828|Q6UWW8-2|CES3;CES3|p.S447Ifs*13|1|0.06|ENSG00000172828|chr16:66972402-66972403|-/A|frameshift_variant;ENSG00000172828|ENST00000303334|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	nc|ENSG00000172828|Q6UWW8-2|CES3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8147460818291	2	561.813325	1121.6121	3.8137	0.0021426	0.037337	2.0976E-05	3.851	0.0021635	561.8131912760588	81.928	0.28429	83.598	83.418	83.702	1.67					20	8	3	0	0	0	0.22411	2	34351	34351;34403		46.021	22	1	1186300			36119	150	17901	17979	42213;42214	42213					0.05615486654187407
VFIQGIASF	9	Unmodified	_VFIQGIASF_					0	0	0		nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	981.5426513552666	1	981.540394	980.533118	3.4929	0.0034284	-0.76309	-0.000749	2.7298	0.0026794	981.5395568478151	72.506	0.36141	73.836	73.643	74.004	1.3297					25	11	3	0	0	0	0.049839	2	30439	30392;30439		68.081	21.16	1	2673300			36120	7831	17902	17980	42215;42216	42216					0.04207259419899856
VFIQGIASF	9	Unmodified	_VFIQGIASF_					0	0	0		nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2753173708916	2	491.273835	980.533118	2.9245	0.0014367	-0.49934	-0.00024531	2.4251	0.0011914	491.2738399509835	72.515	0.36141	73.844	73.643	74.004	1.3297					31	11	4	0	0	0	0.087207	1	30401	30401		53.576	9.1686	1	3294100			36121	7831	17902	17980	42217	42217					0.04207259419899856
VFIQGIASF	9	Unmodified	_VFIQGIASF_					0	0	0		nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	nc|ENSG00000071967|Q53TN4-2|CYBRD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	981.5445434451103	1	981.540394	980.533118	2.8181	0.0027661	1.612	0.0015823	4.4301	0.0043483	981.5416857012142	72.037	0.33015	73.861	73.694	74.024	1.824					18	10	2	0	0	0	0.037761	1	30206	30206		78.149	24.574	1	3686400			36122	7831	17902	17980	42218	42218					0.04207259419899856
VFIRKVKML	9	Unmodified	_VFIRKVKML_					0	0	0		ENST00000488297.2_1_5:87678278-87678506:+|nuORF;ENST00000493479.1_1_4:153472470-153472710:-|nuORF	ENST00000488297.2_1_5:87678278-87678506:+|nuORF	ENST00000488297.2_1_5:87678278-87678506:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.5785705447197	3	378.579095	1132.71546	-0.77616	-0.00029384	0.44202	0.00016734	-0.33413	-0.0001265	378.57927903930755	32.072	1.2716	32.072	31.789	33.06	0					165	40	5	0	0	0	0.85206	1	13826	13826		0.26902	0.26902	1	67199000			36123	6887	17903	17981	42219	42219					0.15440695561005668
VFISWLSVS	9	Unmodified	_VFISWLSVS_					0	0	0		ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	346.5268432497978	3	346.527054	1036.55933	1.0467	0.00036269	-1.0839	-0.0003756	-0.037251	-1.2908E-05	346.52646408116345	66.653	0.30428	68.542	68.341	68.646	1.8889					15	9	2	0	0	0	0.57699	1	27946	27946		12.241	0	1	2336800			36124	6572	17904	17982	42220	42220					0.042515285913850676
VFISWLSVS	9	Unmodified	_VFISWLSVS_					0	0	0		ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	346.527054	1036.55933	-1.4539	-0.00050381	1.2067	0.00041814	-0.24722	-8.567E-05	346.52757190140966	69.042	0.37192	69.042	68.893	69.265	0	0.31921	0.0022229	NaN	12.241	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457580			36125	6572	17904	17982							0.042515285913850676
VFISWLSVS	9	Unmodified	_VFISWLSVS_					0	0	0		ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	ENST00000444244.1_1_7:115878130-115878361:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	346.527054	1036.55933	1.0467	0.00036269	-1.0839	-0.0003756	-0.037251	-1.2908E-05	346.52646408116345	66.653	0.30428	68.542	68.341	68.646	1.8889	-0.18065	-0.0001583	NaN	12.241	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2336800			36126	6572	17904	17982							0.042515285913850676
VFKIVKMI	8	Unmodified	_VFKIVKMI_					0	0	0		ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	ENSG00000039123|ENST00000230640|MTREX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.3154785037041	2	489.314449	976.614345	1.3566	0.00066379	-0.32118	-0.00015716	1.0354	0.00050663	489.31422214686114	77.622	0.675	79.374	79.041	79.716	1.7514					68	21	4	0	0	0	0.89176	1	32602	32602		0.79363	0.79363	1	74157000			36127	656	17905	17983	42221	42221					0.1251024385829851
VFKKRFRIRRM	11	Unmodified	_VFKKRFRIRRM_					0	0	0		ENST00000493793.1_1_1:51887572-51887638:-|nuORF	ENST00000493793.1_1_1:51887572-51887638:-|nuORF	ENST00000493793.1_1_1:51887572-51887638:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.9863159060478	3	512.985518	1535.93473	2.4468	0.0012552	0.20553	0.00010543	2.6524	0.0013606	512.9852917925888	90.809	0.25314	90.809	90.651	90.905	0					12	7	2	0	0	0	1.0405	1	37959	37959		0	0	1	1152200			36128	6929	17906	17984	42222	42222					0.18819519572207355
VFKKRFRIRRM	11	Unmodified	_VFKKRFRIRRM_					0	0	0		ENST00000493793.1_1_1:51887572-51887638:-|nuORF	ENST00000493793.1_1_1:51887572-51887638:-|nuORF	ENST00000493793.1_1_1:51887572-51887638:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	512.985518	1535.93473	2.7889	0.0014307	-0.43744	-0.0002244	2.3514	0.0012063	512.9854683104165	90.483	0.98847	90.692	90.495	91.484	0.20904	-0.058554	-0.0003531	NaN	0	41	30	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1175200			36129	6929	17906	17984							0.18819519572207355
VFKNYEKVF	9	Unmodified	_VFKNYEKVF_					0	0	0			REV__tr|A0A553SHP3|A0A553SHP3_NIACIReplicativeDNAhelicaseOS=NialliacirculansOX=1397GN=dnaBPE=3SV=1	REV__tr|A0A553SHP3|A0A553SHP3_NIACIReplicativeDNAhelicaseOS=NialliacirculansOX=1397GN=dnaBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843505740166	3	391.881608	1172.623	1.8945	0.00074243	-1.3434	-0.00052644	0.55116	0.00021599	391.8810466067164	40.777	0.31635	42.67	42.515	42.832	1.8927					14	9	2	0	0	0	0.11938	1	17040	17040		0.26902	0.033176	1	1150300	+		36130	14806	17907	17985	42223	42223					0.043588890284581794
VFKSVPTHSL	10	Unmodified	_VFKSVPTHSL_					0	0	0			REV__ENSG00000115526|ENST00000264249|CHST10	REV__ENSG00000115526|ENST00000264249|CHST10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8190185427666	2	557.816399	1113.61824	1.9726	0.0011003	3.7966	0.0021178	5.7692	0.0032181	557.8186062994421	83.469	0.56574	84.657	84.388	84.954	1.1879					30	17	3	0	0	0	0.77604	1	35039	35039		14.838	0.93222	1	3451100	+		36131	9441	17908	17986	42224	42224					0.0659800488572273
VFLCYRCSFK	10	Unmodified	_VFLCYRCSFK_					0	0	0		ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5442382693291	3	422.543833	1264.60967	-0.28932	-0.00012225	0.094538	3.9946E-05	-0.19478	-8.2302E-05	422.54376813045377	15.201	0.59182	15.201	14.719	15.311	0					28	18	2	0	0	0	0.88031	1	6231	6231		3.5871	0	1	1419200			36132	7518	17909	17987	42225	42225					-0.012050083467784134
VFLCYRCSFK	10	Unmodified	_VFLCYRCSFK_					0	0	0		ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	422.543833	1264.60967	-0.28932	-0.00012225	0.094538	3.9946E-05	-0.19478	-8.2302E-05	422.54376813045377	15.201	0.59182	15.201	14.719	15.311	0	0.15255	0.0013503	NaN	3.5871	28	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1419200			36133	7518	17909	17987							-0.012050083467784134
VFLCYRCSFK	10	Unmodified	_VFLCYRCSFK_					0	0	0		ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	422.543833	1264.60967	0.59575	0.00025173	-0.85819	-0.00036262	-0.26244	-0.00011089	422.5436697382601	14.786	0.18692	14.899	14.789	14.976	0.11295	-0.14946	0.00014262	NaN	3.5871	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	682640			36134	7518	17909	17987							-0.012050083467784134
VFLCYRCSFK	10	Unmodified	_VFLCYRCSFK_					0	0	0		ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	422.543833	1264.60967	-0.0087304	-3.689E-06	-1.4505	-0.0006129	-1.4592	-0.00061659	422.8776386454588	14.232	0.15767	15.001	14.932	15.09	0.76937	-0.047764	-0.00060821	NaN	3.5871	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	556880			36135	7518	17909	17987							-0.012050083467784134
VFLCYRCSFK	10	Unmodified	_VFLCYRCSFK_					0	0	0		ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	ENST00000595794.5_1_19:51302184-51305576:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	422.543833	1264.60967	0.17629	7.4491E-05	-1.9141	-0.00080878	-1.7378	-0.00073429	422.87723859718096	14.197	0.12622	15.093	15.002	15.128	0.89664	0.044671	-0.0011958	NaN	3.5871	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	209450			36136	7518	17909	17987							-0.012050083467784134
VFLETRLAF	9	Unmodified	_VFLETRLAF_					0	0	0		ENST00000409807.5_1_2:106013113-106013155:-|nuORF;ENST00000322142.12_1_2:106013113-106015436:-|nuORF	ENST00000409807.5_1_2:106013113-106013155:-|nuORF	ENST00000409807.5_1_2:106013113-106013155:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3148071169853	2	548.313492	1094.61243	2.6741	0.0014663	0.6777	0.00037159	3.3518	0.0018379	548.3133658474161	62.7	0.29568	64.114	63.959	64.254	1.4134					23	9	3	0	0	0	0.075994	1	26295	26295		57.722	25.416	1	3101200			36137	5852	17910	17988	42226	42226					0.0689090637404206
VFLETRLAF	9	Unmodified	_VFLETRLAF_					0	0	0		ENST00000409807.5_1_2:106013113-106013155:-|nuORF;ENST00000322142.12_1_2:106013113-106015436:-|nuORF	ENST00000409807.5_1_2:106013113-106013155:-|nuORF	ENST00000409807.5_1_2:106013113-106013155:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3149291872978	2	548.313492	1094.61243	3.0665	0.0016814	-0.58068	-0.0003184	2.4858	0.001363	548.31269211958	62.145	0.30011	64.102	63.908	64.208	1.9571					20	9	3	0	0	0	0.066197	1	26073	26073		61.602	29.296	1	3197300			36138	5852	17910	17988	42227	42227					0.0689090637404206
VFLEVSQHW	9	Unmodified	_VFLEVSQHW_					0	0	0		ENST00000497242.1_1_X:153631168-153631932:-|nuORF;ENSG00000013563|ENST00000369807|DNASE1L1	ENST00000497242.1_1_X:153631168-153631932:-|nuORF	ENST00000497242.1_1_X:153631168-153631932:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.7958251833916	2	572.792924	1143.57129	1.2856	0.00073636	-2.0823	-0.0011927	-0.79675	-0.00045637	572.7928608682083	52.474	0.49957	54.446	54.078	54.577	1.9722					29	15	2	0	0	0	0.04812	2	21976	21976;22029		69.105	36.319	1	1960300			36139	586	17911	17989	42228;42229	42228					0.005251453345636037
VFLEVSQHW	9	Unmodified	_VFLEVSQHW_					0	0	0		ENST00000497242.1_1_X:153631168-153631932:-|nuORF;ENSG00000013563|ENST00000369807|DNASE1L1	ENST00000497242.1_1_X:153631168-153631932:-|nuORF	ENST00000497242.1_1_X:153631168-153631932:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	572.792924	1143.57129	0.73095	0.00041869	1.2556	0.0007192	1.9866	0.0011379	572.7942039592555	53.043	0.51296	54.444	54.089	54.602	1.4005	-0.001264	0.00088358	NaN	69.105	32	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1896700			36140	586	17911	17989							0.005251453345636037
VFLFASEPI	9	Unmodified	_VFLFASEPI_					0	0	0			REV__tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	REV__tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.7783691287041	2	511.781493	1021.54843	2.0972	0.0010733	-2.5951	-0.0013281	-0.49782	-0.00025478	511.78003295108743	84.397	0.31627	85.556	85.402	85.719	1.159					14	9	2	0	0	0	0.3154	1	35408	35408		24.674	1.5255	1	1714700	+		36141	15374	17912	17990	42230	42230					0.03852126217077512
VFLFASEPI	9	Unmodified	_VFLFASEPI_					0	0	0			REV__tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	REV__tr|A0A7D6VQ63|A0A7D6VQ63_9CLOTATPsynthasesubunitbetaOS=ClostridiumintestinaleOX=36845GN=atpDPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	511.781493	1021.54843	2.0972	0.0010733	-2.5951	-0.0013281	-0.49782	-0.00025478	511.78003295108743	84.397	0.31627	85.556	85.402	85.719	1.159	-0.0088405	0.00058971	NaN	24.674	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1714700	+		36142	15374	17912	17990							0.03852126217077512
VFLGSGTQIL	10	Unmodified	_VFLGSGTQIL_					0	0	0		ENSG00000125304|ENST00000376387|TM9SF2	ENSG00000125304|ENST00000376387|TM9SF2	ENSG00000125304|ENST00000376387|TM9SF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1034.591601550579	1	1034.58807	1033.5808	4.0108	0.0041495	-0.69152	-0.00071544	3.3193	0.0034341	1034.5878226206667	97.454	0.17915	97.76	97.685	97.864	0.3062					11	5	3	0	0	0	0.25819	2	40998	40981;40998		41.84	3.8656	1	54461000			36143	2255	17913	17991	42231;42232	42232					0.06534913620112093
VFLIWVLAI	9	Unmodified	_VFLIWVLAI_					0	0	0			REV__ENST00000432809.5_1_3:33339416-33427097:+|nuORF	REV__ENST00000432809.5_1_3:33339416-33427097:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.2881957888603	2	537.341521	1072.66849	2.1561	0.0011586	-1.41	-0.00075765	0.74612	0.00040092	537.341508673252	84.685	0.30815	85.844	85.687	85.995	1.159					15	9	2	0	0	0	0.099861	1	35596	35596		14.582	0	1	1359600	+		36144	13035	17914	17992	42233	42233					0.13506159281496366
VFLKAGASF	9	Unmodified	_VFLKAGASF_					0	0	0		ENST00000368875.6_2_1:151298654-151299818:-|nuORF	ENST00000368875.6_2_1:151298654-151299818:-|nuORF	ENST00000368875.6_2_1:151298654-151299818:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	470.2696105837822	2	470.268553	938.522553	2.0458	0.00096207	-1.4763	-0.00069424	0.56952	0.00026783	470.2676932984714	38.745	0.33141	40.041	39.865	40.197	1.2961					16	10	2	0	0	0	0.12251	1	16230	16230		41.84	17.166	1	1360000			36145	6090	17915	17993	42234	42234					0.05083276765469691
VFLKAGASF	9	Unmodified	_VFLKAGASF_					0	0	0		ENST00000368875.6_2_1:151298654-151299818:-|nuORF	ENST00000368875.6_2_1:151298654-151299818:-|nuORF	ENST00000368875.6_2_1:151298654-151299818:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	470.2695495486259	2	470.268553	938.522553	1.288	0.00060569	-0.28127	-0.00013227	1.0067	0.00047341	470.26844006647724	38.074	0.30884	39.894	39.759	40.068	1.8202					15	9	2	0	0	0	0.12251	1	15993	15993		41.84	14.956	1	1816000			36146	6090	17915	17993	42235	42235					0.05083276765469691
VFLKKWINF	9	Unmodified	_VFLKKWINF_					0	0	0			REV__nc|nan|Q3C1V1-2|C11orf91	REV__nc|nan|Q3C1V1-2|C11orf91	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8580810427666	2	597.855327	1193.6961	3.4736	0.0020767	0.94402	0.00056439	4.4176	0.0026411	597.8557675871057	73.822	2.6041	75.14	73.992	76.597	1.318					144	83	3	0	0	0	0.75267	1	31080	31080		5.2307	1.2863	1	2054400	+		36147	11811	17916	17994	42236	42236					0.10700062541741318
VFLKKWINF	9	Unmodified	_VFLKKWINF_					0	0	0			REV__nc|nan|Q3C1V1-2|C11orf91	REV__nc|nan|Q3C1V1-2|C11orf91	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8580200076103	2	597.855327	1193.6961	2.8708	0.0017163	0.81424	0.0004868	3.6851	0.0022031	597.8559668340692	73.631	2.3111	75.427	74.402	76.713	1.7962					133	73	3	0	0	0	0.75267	2	30819	30819;30867		5.2307	0.90143	1	1933100	+		36148	11811	17916	17994	42237;42238	42237					0.10700062541741318
VFLKNSIHL	9	Unmodified	_VFLKNSIHL_					0	0	0			REV__DAPK1|p.L931M|1|0.28|ENSG00000196730|chr9:87700157-87700157|C/A|missense_variant	REV__DAPK1|p.L931M|1|0.28|ENSG00000196730|chr9:87700157-87700157|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8204833865166	2	535.821484	1069.62842	2.9486	0.0015799	-3.2073	-0.0017185	-0.25868	-0.00013861	535.8196832997363	82.672	0.3012	84.342	84.113	84.415	1.67					27	9	4	0	0	0	0.68551	1	34653	34653		7.9102	0.62092	1	5264200	+		36149	8421	17917	17995	42239	42239					0.09638612610956443
VFLLNFILMSI	11	Unmodified	_VFLLNFILMSI_					0	0	0			REV__ENSG00000144820|ENST00000273352|ADGRG7	REV__ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.3873168826103	2	655.38306	1308.75157	3.0352	0.0019892	-0.092204	-6.0429E-05	2.943	0.0019288	655.3830394817613	82.534	1.8158	83.747	82.945	84.761	1.2125					118	57	3	0	0	0	1.0362	1	34977	34977		1.3295	0.13619	1	7127800	+		36150	10262	17918	17996	42240	42240					0.10954107947213743
VFLLNFILMSI	11	Unmodified	_VFLLNFILMSI_					0	0	0			REV__ENSG00000144820|ENST00000273352|ADGRG7	REV__ENSG00000144820|ENST00000273352|ADGRG7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3837158083916	2	655.38306	1308.75157	2.0883	0.0013686	-3.3673	-0.0022069	-1.279	-0.00083823	655.3809698523481	82.943	0.81206	84.613	84.415	85.227	1.67					34	25	2	0	0	0	1.0362	1	34822	34822		1.3295	0.36726	1	2614900	+		36151	10262	17918	17996	42241	42241					0.10954107947213743
VFLPREDHLF	10	Unmodified	_VFLPREDHLF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.2302123904228	3	424.896029	1271.66626	1.5368	0.00065297	0.93299	0.00039643	2.4698	0.0010494	424.8965789440465	48.957	0.46836	50.345	50.202	50.67	1.388					28	14	3	0	0	0	0.48563	1	20490	20490		28.234	8.2467	1	1619900			36152	5130	17919	17997	42242	42242					0.041290788057494865
VFLPREDHLF	10	Unmodified	_VFLPREDHLF_					0	0	0		ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	ENSG00000204287|ENST00000395388|HLA-DRA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	424.8969909548759	3	424.896029	1271.66626	2.0904	0.0008882	-0.325	-0.00013809	1.7654	0.00075011	424.8960075042495	48.46	0.40276	50.437	50.266	50.669	1.9772					25	12	3	0	0	0	0.44353	1	20278	20278		30.703	2.2089	1	1693700			36153	5130	17919	17997	42243	42243					0.041290788057494865
VFLRSRNKGT	10	Unmodified	_VFLRSRNKGT_					0	0	0		tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3440429568291	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.89803	1	32324	32324		1.4819	0.15237	1	9601000			36154	16624	17920	17998	42244	42244					0.09147016757128767
VFLRSRNKGT	10	Unmodified	_VFLRSRNKGT_					0	0	0		tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3438598513603	2	589.343646	1176.67274	2.8028	0.0016518	-1.5598	-0.00091927	1.2429	0.00073252	589.3424328799648	73.443	1.6816	75.239	74.56	76.242	1.7962					102	53	3	0	0	0	0.88022	1	30884	30884		3.5965	0	1	2043500			36155	16624	17920	17998	42245	42245					0.09147016757128767
VFLRSRNKGT	10	Unmodified	_VFLRSRNKGT_					0	0	0		tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3453857302666	2	589.343646	1176.67274	2.6941	0.0015878	-1.0088	-0.00059453	1.6853	0.00099323	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.89803	1	32232	32232		1.4819	1.4819	1	8587800			36156	16624	17920	17998	42246	42246					0.09147016757128767
VFLSGMPEL	9	Unmodified	_VFLSGMPEL_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2;ENSG00000072958|ENST00000291439|AP1M1;nc|ENSG00000072958|Q9BXS5-2|AP1M1;ENST00000586461.1_1_19:16319820-16337387:+|nuORF	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	992.5143920779228	1	992.512131	991.504854	4.0871	0.0040565	-1.3554	-0.0013453	2.7317	0.0027113	992.5101830278575	75.415	0.45841	76.721	76.435	76.894	1.3063					18	14	2	0	0	0	0.1735	1	31624	31624		36.044	3.9272	1	897340			36157	2402	17921	17999	42247	42247					0.008761934483004552
VFLTVNVSF	9	Unmodified	_VFLTVNVSF_					0	0	0			REV__tr|A0A7D6ZYS0|A0A7D6ZYS0_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17455PE=4SV=1	REV__tr|A0A7D6ZYS0|A0A7D6ZYS0_9CLOTMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17455PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.7936279177666	2	513.286943	1024.55933	2.3761	0.0012196	-1.5868	-0.0008145	0.78927	0.00040512	513.2862430148315	46.892	1.1479	48.274	47.869	49.017	1.3825					94	35	4	0	0	0	0.34572	1	19556	19556		23.148	0	1	26779000	+		36158	15782	17922	18000	42248	42248					0.04803528591378381
VFNDVRLLL	9	Unmodified	_VFNDVRLLL_					0	0	0		ENST00000485542.5_1_1:113162466-113192092:+|nuORF;ENST00000476936.5_1_1:113162466-113209756:+|nuORF;ENST00000464669.1_1_7:116502674-116546397:+|nuORF;nc|ENSG00000198898|P47755-2|CAPZA2;CAPZA2-C7orf33|1|fusion;ENSG00000198898|ENST00000361183|CAPZA2;ENSG00000116489|ENST00000263168|CAPZA1	ENST00000485542.5_1_1:113162466-113192092:+|nuORF	ENST00000485542.5_1_1:113162466-113192092:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.8278686404228	2	544.826766	1087.63898	1.7222	0.00093833	0.54346	0.00029609	2.2657	0.0012344	544.827282223783	67.304	0.75702	68.682	68.456	69.213	1.3778					57	24	4	0	0	0	0.042285	2	28201	28201;28253		74.2	23.345	1	11423000			36159	118	17923	18001	42249;42250	42249					0.09866595265384603
VFNDVRLLL	9	Unmodified	_VFNDVRLLL_					0	0	0		ENST00000485542.5_1_1:113162466-113192092:+|nuORF;ENST00000476936.5_1_1:113162466-113209756:+|nuORF;ENST00000464669.1_1_7:116502674-116546397:+|nuORF;nc|ENSG00000198898|P47755-2|CAPZA2;CAPZA2-C7orf33|1|fusion;ENSG00000198898|ENST00000361183|CAPZA2;ENSG00000116489|ENST00000263168|CAPZA1	ENST00000485542.5_1_1:113162466-113192092:+|nuORF	ENST00000485542.5_1_1:113162466-113192092:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.8273803591728	2	544.826766	1087.63898	1.4142	0.00077048	0.16128	8.7869E-05	1.5755	0.00085835	544.8270984763969	66.796	0.51889	68.685	68.467	68.986	1.8889					40	16	4	0	0	0	0.026411	3	28019	27970;28019;28073		93.166	32.776	1	9833600			36160	118	17923	18001	42251;42252;42253	42252					0.09866595265384603
VFNLSDFV	8	Unmodified	_VFNLSDFV_					0	0	0		ENSG00000164638|ENST00000396872|SLC29A4;nc|ENSG00000164638|Q7RTT9-2|SLC29A4;ENST00000439491.2_1_7:5338995-5342941:+|nuORF	ENSG00000164638|ENST00000396872|SLC29A4	ENSG00000164638|ENST00000396872|SLC29A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	314.1643859744072	3	314.164004	939.470183	0.56338	0.00017699	-0.13844	-4.3493E-05	0.42494	0.0001335	314.1635612041492	67.175	0.64713	68.564	68.246	68.893	1.3888					27	20	2	0	0	0	0.88508	1	28207	28207		5.7319	0	1	1176600			36161	3786	17924	18002	42254	42254					-0.001973063681475651
VFNRQLESF	9	Unmodified	_VFNRQLESF_					0	0	0			REV__nc|ENSG00000135114|Q15646-2|OASL	REV__nc|ENSG00000135114|Q15646-2|OASL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	570.2979003787041	2	570.29583	1138.57711	4.382	0.002499	-1.9754	-0.0011266	2.4065	0.0013724	570.7957949158069	87.311	0.12432	88.403	88.304	88.428	1.0918					5	3	2	0	0	0	0.10591	1	36822	36822		18.135	1.1927	1	4530800	+		36162	9930	17925	18003	42255	42255					0.013362438462309001
VFPDKGYSF	9	Unmodified	_VFPDKGYSF_					0	0	0		MAP4K5-TIA1|1|fusion;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;ENSG00000116001|ENST00000433529|TIA1	MAP4K5-TIA1|1|fusion	MAP4K5-TIA1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2606689333916	2	530.260925	1058.5073	2.0216	0.001072	-1.5789	-0.00083722	0.44271	0.00023475	530.260130237638	38.896	1.4409	40.193	39.6	41.041	1.2961					105	47	3	0	0	0	0.12251	8	16263	16137;16181;16227;16263;16311;16359;16466;16518		41.84	20.093	1	5047000			36163	7790	17926	18004	42256;42257;42258;42259;42260;42261;42262;42263	42259					-0.019616348223962632
VFPDKGYSF	9	Unmodified	_VFPDKGYSF_					0	0	0		MAP4K5-TIA1|1|fusion;ENST00000477415.5_1_2:70443338-70451751:-|nuORF;ENST00000482876.5_1_2:70442329-70444102:-|nuORF;nc|ENSG00000116001|P31483-2|TIA1;ENSG00000116001|ENST00000433529|TIA1	MAP4K5-TIA1|1|fusion	MAP4K5-TIA1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2616454958916	2	530.260925	1058.5073	1.2344	0.00065457	-0.6289	-0.00033348	0.60553	0.00032109	530.260543625724	38.046	1.4416	39.866	39.517	40.959	1.8202					115	45	3	0	0	0	0.12251	9	15965	15865;15914;15965;16014;16059;16110;16213;16268;16320		41.84	19.103	1	4408100			36164	7790	17926	18004	42264;42265;42266;42267;42268;42269;42270;42271;42272	42266					-0.019616348223962632
VFPEKGYSF	9	Unmodified	_VFPEKGYSF_					0	0	0		ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;ENSG00000151923|ENST00000436547|TIAL1;nc|ENSG00000151923|Q01085-2|TIAL1	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2684814333916	2	537.26875	1072.52295	1.3615	0.00073151	-0.93925	-0.00050463	0.42228	0.00022688	537.2684333249745	38.004	1.8615	39.288	38.601	40.463	1.284					178	71	3	0	0	0	0.11606	11	16131	15679;15765;15863;15941;15992;16089;16131;16182;16283;16350;16401		47.749	20.093	1	19809000			36165	6900	17927	18005	42273;42274;42275;42276;42277;42278;42279;42280;42281;42282;42283	42279					-0.010413483053298478
VFPEKGYSF	9	Unmodified	_VFPEKGYSF_					0	0	0		ENST00000489822.5_1_10:121336540-121356247:-|nuORF;ENST00000497671.5_1_10:121335179-121339984:-|nuORF;ENSG00000151923|ENST00000436547|TIAL1;nc|ENSG00000151923|Q01085-2|TIAL1	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	ENST00000489822.5_1_10:121336540-121356247:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2686645388603	2	537.26875	1072.52295	0.92958	0.00049944	-0.7494	-0.00040263	0.18018	9.6805E-05	537.2685895278216	37.149	1.9185	38.969	38.526	40.445	1.8202					189	75	3	0	0	0	0.087723	10	15576	15417;15456;15536;15576;15617;15667;15811;15864;15921;15966		58.679	18.555	1	8408100			36166	6900	17927	18005	42284;42285;42286;42287;42288;42289;42290;42291;42292;42293	42287					-0.010413483053298478
VFPPIILL	8	Unmodified	_VFPPIILL_					0	0	0			REV__tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	REV__tr|A0A553SHX4|A0A553SHX4_NIACIPTSsugartransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_13795PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2481262087822	3	304.537002	910.589176	-0.45712	-0.00013921	-3.1117	-0.00094764	-3.5689	-0.0010869	304.53601692980584	15.341	0.26419	16.38	16.224	16.488	1.0392					13	8	2	0	0	0	2.3239	1	6329	6329		0.45834	0	1	431180	+		36167	14824	17928	18006	42294	42294					0.13030512327384258
VFPVATLEEL	10	Unmodified	_VFPVATLEEL_					0	0	0			REV__nc|ENSG00000167106|Q5T9C2-2|EEIG1	REV__nc|ENSG00000167106|Q5T9C2-2|EEIG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.3121215701103	2	559.310615	1116.60668	1.2058	0.00067442	4.1417	0.0023165	5.3475	0.0029909	559.3123146396579	72.188	0.37999	72.188	72.016	72.396	0					32	11	4	0	0	0	0.57775	1	30059	30059		24.021	0	1	617220	+		36168	10855	17929	18007	42295	42295					0.053037630717199136
VFPVATLEEL	10	Unmodified	_VFPVATLEEL_					0	0	0			REV__nc|ENSG00000167106|Q5T9C2-2|EEIG1	REV__nc|ENSG00000167106|Q5T9C2-2|EEIG1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	559.310615	1116.60668	1.2058	0.00067442	4.1417	0.0023165	5.3475	0.0029909	559.3123146396579	72.188	0.37999	72.188	72.016	72.396	0	0	0	NaN	24.021	32	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617220	+		36169	10855	17929	18007							0.053037630717199136
VFQNIELKV	9	Unmodified	_VFQNIELKV_					0	0	0		ENST00000477941.2_1_1:144952199-144955307:-|nuORF	ENST00000477941.2_1_1:144952199-144955307:-|nuORF	ENST00000477941.2_1_1:144952199-144955307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3179199099541	2	545.318774	1088.623	1.5524	0.00084657	-2.7566	-0.0015033	-1.2042	-0.00065668	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.84195	1	30954	30954		1.6526	0.17072	1	3210400			36170	6795	17930	18008	42296	42296					0.08222889028479585
VFRKQRPKRAE	11	Unmodified	_VFRKQRPKRAE_					0	0	0		ENST00000596960.1_1:149575608-149575677:+|nuORF	ENST00000596960.1_1:149575608-149575677:+|nuORF	ENST00000596960.1_1:149575608-149575677:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2859680056572	3	472.28451	1413.8317	3.3353	0.0015752	-2.1795	-0.0010294	1.1558	0.00054587	472.28333069559534	87.104	1.4196	87.348	87.22	88.64	0.24387					116	47	3	0	0	0	1.0373	1	36596	36596		0.32927	0	1	4354100			36171	7522	17931	18009	42297	42297					0.14133730385242416
VFRLQFDEF	9	Unmodified	_VFRLQFDEF_					0	0	0		nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000166167|Q9Y297-2|BTRC;ENSG00000166167|ENST00000370187|BTRC	nc|ENSG00000072803|Q9UKB1-2|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8076049685478	2	600.806031	1199.59751	1.923	0.0011554	0.91685	0.00055085	2.8399	0.0017062	600.806156459869	67.613	0.85818	68.99	68.757	69.615	1.3778					70	27	4	0	0	0	1.0041E-05	3	28369	28321;28369;28425		181.33	122.65	1	19369000			36172	890	17932	18010	42298;42299;42300	42299					0.005694145060488154
VFRLQFDEF	9	Unmodified	_VFRLQFDEF_					0	0	0		nc|ENSG00000072803|Q9UKB1-2|FBXW11;nc|ENSG00000072803|Q9UKB1-3|FBXW11;nc|ENSG00000072803|Q9UKB1|FBXW11;ENSG00000072803|ENST00000517395|FBXW11;nc|ENSG00000166167|Q9Y297-2|BTRC;ENSG00000166167|ENST00000370187|BTRC	nc|ENSG00000072803|Q9UKB1-2|FBXW11	nc|ENSG00000072803|Q9UKB1-2|FBXW11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.8069335818291	2	600.806031	1199.59751	1.2726	0.00076461	1.0722	0.00064417	2.3448	0.0014088	600.8063951760408	67.145	0.55373	69.034	68.764	69.318	1.8889					42	17	3	0	0	0	1.1665E-10	3	28156	28107;28156;28200		205.78	147.1	1	18057000			36173	890	17932	18010	42301;42302;42303	42302					0.005694145060488154
VFRLVFGCCRC	11	Unmodified	_VFRLVFGCCRC_					0	0	0			REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8818847537041	3	434.880451	1301.61952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.96	1	111.12	110.62	111.62	0.16445								0	0	0	0.63775	1	48167	48167		0	0	1		+		36174	12219	17933	18011	42304	42304					-0.019221436130237635
VFRLVFGCCRC	11	Unmodified	_VFRLVFGCCRC_					0	0	0			REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8817626833916	3	434.880451	1301.61952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.17	1	111.33	110.83	111.83	0.16445								0	0	0	0.63775	1	48252	48252		0	0	1		+		36175	12219	17933	18011	42305	42305					-0.019221436130237635
VFRLVFGCCRC	11	Unmodified	_VFRLVFGCCRC_					0	0	0			REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	REV__ENST00000265678.8_1_6:166825090-166825723:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8820068240166	3	434.880451	1301.61952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.26	1	111.42	110.92	111.92	0.16445								0	0	0	0.63775	1	48288	48288		0	0	1		+		36176	12219	17933	18011	42306	42306					-0.019221436130237635
VFSCTFSIVL	10	Unmodified	_VFSCTFSIVL_					0	0	0			REV__ENST00000526755.5_1_8:42911676-42932640:+|nuORF	REV__ENST00000526755.5_1_8:42911676-42932640:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2994872927666	2	558.293911	1114.57327	2.3651	0.0013204	2.8817	0.0016088	5.2467	0.0029292	558.2951828020205	64.29	0.44224	66.218	66.045	66.487	1.928					28	13	3	0	0	0	0.38674	2	26942	26942;26989		34.102	8.7031	1	2501400	+		36177	13670	17934	18012	42307;42308	42307					0.020564380281484773
VFSFVAEQM	9	Unmodified	_VFSFVAEQM_					0	0	0			REV__MER4C_dup475|chr13:22894085-22894537:+|1.6161857773227315|0.1072648648957019|3.91|413.0|2|1|sense	REV__MER4C_dup475|chr13:22894085-22894537:+|1.6161857773227315|0.1072648648957019|3.91|413.0|2|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2571899294853	2	529.254785	1056.49502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.316	1	84.954	84.454	85.454	1.6379								0	0	0	0.42693	1	34947	34947		5.2307	0	1		+		36178	14360	17935	18013	42309	42309					-0.030969945570632262
VFSKVWHSHFI	11	Unmodified	_VFSKVWHSHFI_					0	0	0			REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|267|2|anti-sense	REV__L1MA1_dup2764|chrX:115931094-115936482:-|2.805996385563428|0.2242833538996142|3.65|427.0|267|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1467162966728	3	462.915423	1385.72444	1.9136	0.00088582	0.44565	0.0002063	2.3592	0.0010921	463.2498937664115	45.943	0.3471	47.318	47.177	47.524	1.3751					18	10	2	0	0	0	0.14606	1	19244	19244		0.50596	0.34663	1	820730	+		36179	14257	17936	18014	42310	42310					0.0470076045105543
VFTEVANLF	9	Unmodified	_VFTEVANLF_					0	0	0		SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant;nc|ENSG00000127511|O75182-3|SIN3B;SIN3B|p.E481Lfs*18|1|0.11|ENSG00000127511|chr19:16863757-16863758|-/CTGAGATGGTTGCTGTCTGACCCTTTGCAGA|frameshift_variant;ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.2783691287041	2	520.276575	1038.5386	2.6846	0.0013967	0.58603	0.0003049	3.2706	0.0017016	520.2767738660334	77.245	0.85508	78.526	78.001	78.856	1.2809					52	26	3	0	0	0	0.026628	4	32436	32341;32387;32436;32484		92.822	20.256	1	10703000			36180	2338	17937	18015	42311;42312;42313;42314	42313					0.020869382116870838
VFTEVANLF	9	Unmodified	_VFTEVANLF_					0	0	0		SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant;nc|ENSG00000127511|O75182-3|SIN3B;SIN3B|p.E481Lfs*18|1|0.11|ENSG00000127511|chr19:16863757-16863758|-/CTGAGATGGTTGCTGTCTGACCCTTTGCAGA|frameshift_variant;ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1039.548632800579	1	1039.54587	1038.5386	2.0471	0.002128	0.17938	0.00018648	2.2264	0.0023145	1039.545957028594	77.21	0.44666	78.491	78.313	78.76	1.2809					29	13	3	0	0	0	0.026628	2	32390	32390;32440		92.822	14.673	1	6524700			36181	2338	17937	18015	42315;42316	42315					0.020869382116870838
VFTEVANLF	9	Unmodified	_VFTEVANLF_					0	0	0		SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant;nc|ENSG00000127511|O75182-3|SIN3B;SIN3B|p.E481Lfs*18|1|0.11|ENSG00000127511|chr19:16863757-16863758|-/CTGAGATGGTTGCTGTCTGACCCTTTGCAGA|frameshift_variant;ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.2778198122978	2	520.276575	1038.5386	2.2377	0.0011642	0.15206	7.9112E-05	2.3898	0.0012433	520.2765351231491	76.73	0.79651	78.498	77.972	78.768	1.7672					49	24	3	0	0	0	0.033794	3	32173	32128;32173;32212		81.613	25.113	1	17008000			36182	2338	17937	18015	42317;42318;42319	42318					0.020869382116870838
VFTEVANLF	9	Unmodified	_VFTEVANLF_					0	0	0		SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant;nc|ENSG00000127511|O75182-3|SIN3B;SIN3B|p.E481Lfs*18|1|0.11|ENSG00000127511|chr19:16863757-16863758|-/CTGAGATGGTTGCTGTCTGACCCTTTGCAGA|frameshift_variant;ENSG00000127511|ENST00000248054|SIN3B;nc|ENSG00000127511|O75182|SIN3B	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	SIN3B|p.G223A|1|0.07|ENSG00000127511|chr19:16847055-16847055|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1039.548022449017	1	1039.54587	1038.5386	3.2162	0.0033434	-0.2939	-0.00030552	2.9223	0.0030379	1039.5452938654078	76.762	0.41537	78.529	78.288	78.704	1.7672					28	12	3	0	0	0	0.031377	1	32190	32190		85.272	7.1226	1	4260600			36183	2338	17937	18015	42320	42320					0.020869382116870838
VFTMIDIF	8	Unmodified	_VFTMIDIF_					0	0	0		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	493.2589904665947	2	493.256797	984.499041	1.3662	0.0006739	2.946	0.0014531	4.3122	0.002127	493.25832054219376	25.071	0.20901	26.33	26.227	26.436	1.2594					11	6	2	0	0	0	0.67986	1	10503	10503		40.449	4.3216	1	695980			36184	3268	17938	18016	42321	42321					0.006170949366492096
VFTMIDIF	8	Unmodified	_VFTMIDIF_					0	0	0		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	493.256797	984.499041	0.70138	0.00034596	3.5663	0.0017591	4.2676	0.002105	493.2586125869693	24.742	0.21405	26.426	26.298	26.513	1.6845	0.048013	0.00041295	NaN	40.449	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	288480			36185	3268	17938	18016							0.006170949366492096
VFTNMREGLSQ	11	Unmodified	_VFTNMREGLSQ_					0	0	0			REV__ENSG00000169427|ENST00000520439|KCNK9	REV__ENSG00000169427|ENST00000520439|KCNK9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	640.8183471560478	2	641.316437	1280.61832	4.2762	0.0027424	-1.2792	-0.00082038	2.997	0.001922	641.3153407707968	86.696	1.7753	88.192	87.878	89.653	1.4953					88	57	2	0	0	0	0.14337	1	37133	37133		20.415	10.264	1	2025500	+		36186	10948	17939	18017	42322	42322					-0.010763631765939863
VFTYVTRNTSP	11	Unmodified	_VFTYVTRNTSP_					0	0	0			REV__nc|ENSG00000160282|O95954-4|FTCD	REV__nc|ENSG00000160282|O95954-4|FTCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	429.2906066775322	3	428.890944	1283.651	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.18	1	110.34	109.84	110.84	0.16133								0	0	0	0.63775	1	47869	47869		0.50596	0	1		+		36187	10596	17940	18018	42323	42323					0.020521672179029338
VFVEATHVL	9	Unmodified	_VFVEATHVL_					0	0	0		ENST00000482948.5_1_5:137536747-137548896:-|nuORF;nc|ENSG00000094880|Q9UJX2-3|CDC23;ENSG00000094880|ENST00000394886|CDC23	ENST00000482948.5_1_5:137536747-137548896:-|nuORF	ENST00000482948.5_1_5:137536747-137548896:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7856017947197	2	507.784567	1013.55458	2.5085	0.0012738	1.7859	0.00090683	4.2944	0.0021806	507.784681412512	41.632	0.44515	42.957	42.65	43.096	1.3254					27	13	3	0	0	0	0.24063	1	17434	17434		28.487	6.7402	1	1226600			36188	1177	17941	18019	42324	42324					0.04834644448601466
VFVEATHVL	9	Unmodified	_VFVEATHVL_					0	0	0		ENST00000482948.5_1_5:137536747-137548896:-|nuORF;nc|ENSG00000094880|Q9UJX2-3|CDC23;ENSG00000094880|ENST00000394886|CDC23	ENST00000482948.5_1_5:137536747-137548896:-|nuORF	ENST00000482948.5_1_5:137536747-137548896:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	507.784567	1013.55458	2.093	0.0010628	1.4709	0.00074691	3.564	0.0018097	508.28810959354576	41.167	0.34736	43.059	42.832	43.179	1.8927	0.051047	-0.00015133	NaN	28.487	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1238000			36189	1177	17941	18019							0.04834644448601466
VFVFHVLL	8	Unmodified	_VFVFHVLL_					0	0	0		ENST00000586115.5_1_19:37080585-37096048:-|nuORF	ENST00000586115.5_1_19:37080585-37096048:-|nuORF	ENST00000586115.5_1_19:37080585-37096048:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2025634646416	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.63	1	100.71	100.21	101.21	0.072716								0	0	0	1.0178	1	42130	42130		0.45834	0	1				36190	7454	17942	18020	42325	42325					0.09228744041865866
VFVFHVLL	8	Unmodified	_VFVFHVLL_					0	0	0		ENST00000586115.5_1_19:37080585-37096048:-|nuORF	ENST00000586115.5_1_19:37080585-37096048:-|nuORF	ENST00000586115.5_1_19:37080585-37096048:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2004882693291	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.12	1	102.18	101.68	102.68	0.062805								0	0	0	1.0178	1	42757	42757		0.45834	0	1				36191	7454	17942	18020	42326	42326					0.09228744041865866
VFVGRDWLF	9	Unmodified	_VFVGRDWLF_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8068725466728	2	569.805834	1137.59712	3.0876	0.0017594	-1.5307	-0.00087222	1.5569	0.00088714	569.8049883788748	70.632	0.47624	71.985	71.807	72.284	1.3536					35	14	4	0	0	0	0.099302	2	29654	29617;29654		49.554	23.286	1	5649700			36192	1901	17943	18021	42327;42328	42328					0.0338203957683163
VFVGRDWLF	9	Unmodified	_VFVGRDWLF_					0	0	0		nc|ENSG00000115183|Q9C0D5-2|TANC1;ENSG00000115183|ENST00000263635|TANC1;TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant	nc|ENSG00000115183|Q9C0D5-2|TANC1	nc|ENSG00000115183|Q9C0D5-2|TANC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8057739138603	2	569.805834	1137.59712	2.355	0.0013419	-1.5925	-0.00090744	0.7625	0.00043447	569.8046500350382	70.108	0.50942	71.946	71.719	72.228	1.8378					34	15	3	0	0	0	0.12216	2	29423	29374;29423		41.956	12.874	1	3529800			36193	1901	17943	18021	42329;42330	42330					0.0338203957683163
VFVGTGDLF	9	Unmodified	_VFVGTGDLF_					0	0	0		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK;ENST00000468392.5_1_21:45165928-45175941:+|nuORF;nc|ENSG00000160209|O00764-2|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.4948608279228	1	954.49311	953.485833	1.3117	0.001252	-1.5906	-0.0015182	-0.27884	-0.00026615	954.4912859732866	69.362	0.37547	70.727	70.501	70.876	1.3657					27	12	3	0	0	0	0.0045981	2	29063	29063;29110		123.1	65.625	1	6984800			36194	3547	17944	18022	42331;42332	42331					0.007229801489188503
VFVGTGDLF	9	Unmodified	_VFVGTGDLF_					0	0	0		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK;ENST00000468392.5_1_21:45165928-45175941:+|nuORF;nc|ENSG00000160209|O00764-2|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	954.4933959841728	1	954.49311	953.485833	1.6474	0.0015724	-1.5162	-0.0014472	0.13118	0.00012521	954.4917221898573	68.81	0.38898	70.663	70.439	70.828	1.853					30	12	3	0	0	0	0.0045981	2	28864	28817;28864		123.1	62.707	1	5361800			36195	3547	17944	18022	42333;42334	42334					0.007229801489188503
VFVLPFPV	8	Unmodified	_VFVLPFPV_					0	0	0		ENST00000370490.1_1_X:144906531-144906621:+|nuORF	ENST00000370490.1_1_X:144906531-144906621:+|nuORF	ENST00000370490.1_1_X:144906531-144906621:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1724426150322	2	459.278389	916.542226	2.5296	0.0011618	1.5032	0.00069041	4.0329	0.0018522	459.27813005621493	63.625	0.26516	63.954	63.82	64.085	0.32899					16	8	3	0	0	0	2.3239	1	26665	26665		0.79363	0	1	1082700			36196	6116	17945	18023	42335	42335					0.08061652776245865
VFVNIQYTL	9	Unmodified	_VFVNIQYTL_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.2463867068291	2	548.8055	1095.59645	1.3591	0.00074587	-1.9312	-0.0010599	-0.57215	-0.000314	548.8048031561527	71.722	0.40576	73.064	72.842	73.248	1.3415					27	12	3	0	0	0	0.032748	1	30117	30117		44.407	22.66	1	3092800			36197	3475	17946	18024	42336	42336					0.052472001371370425
VFVNIQYTL	9	Unmodified	_VFVNIQYTL_					0	0	0		ENST00000480452.5_1_21:38605608-38639601:-|nuORF;ENST00000399000.7_1_21:38604874-38639643:-|nuORF;ENSG00000157538|ENST00000309117|VPS26C	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	ENST00000480452.5_1_21:38605608-38639601:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	548.8055	1095.59645	1.4762	0.00081016	-1.8341	-0.0010066	-0.35791	-0.00019642	548.80467231515	71.314	0.34367	73.138	72.91	73.253	1.824	0.037113	4.5369E-05	NaN	44.407	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3413800			36198	3475	17946	18024							0.052472001371370425
VFVVMRKG	8	Unmodified	_VFVVMRKG_					0	0	0			REV__ENSG00000118997|ENST00000312428|DNAH7	REV__ENSG00000118997|ENST00000312428|DNAH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	468.2805053591728	2	468.278398	934.542243	3.4575	0.0016191	1.3349	0.00062511	4.7924	0.0022442	468.2790208794072	103.45	0.063293	103.51	103.46	103.52	0.059502					4	2	2	0	0	0	0.89198	1	43398	43398		0	0	1	73784000	+		36199	9529	17947	18025	42337	42337					0.07235329504601395
VFVVVLRVIIG	11	Unmodified	_VFVVVLRVIIG_					0	0	0			REV__ENST00000565181.1_1_15:72766821-72767304:-|nuORF	REV__ENST00000565181.1_1_15:72766821-72767304:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2755309939384	3	405.272548	1212.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.461	1	31.752	31.252	32.252	0.29086								0	0	0	0.63775	1	13206	13206		0.50596	0.23694	1		+		36200	13930	17948	18026	42338	42338					0.19792880155728199
VFWGYKHIANL	11	Unmodified	_VFWGYKHIANL_					0	0	0		nc|ENSG00000112874|Q9BQG2-2|NUDT12;ENSG00000112874|ENST00000230792|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	nc|ENSG00000112874|Q9BQG2-2|NUDT12	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9120971560478	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9627	1	9.5992	9.0992	10.099	0.63651								0	0	0	0.63775	1	3722	3722		0	0	1				36201	1799	17949	18027	42339	42339					0.05405358076768607
VFWQPSVI	8	Unmodified	_VFWQPSVI_					0	0	0			REV__tr|A0A553SRL6|A0A553SRL6_NIACIProteinDltDOS=NialliacirculansOX=1397GN=dltDPE=3SV=1	REV__tr|A0A553SRL6|A0A553SRL6_NIACIProteinDltDOS=NialliacirculansOX=1397GN=dltDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2718994021416	2	488.268553	974.522553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.391	1	58.714	58.214	59.214	0.32298								0	0	0	1.0178	1	24474	24474		2.5775	0.27475	1		+		36202	15166	17950	18028	42340	42340					0.03427276765478382
VFYIIRETI	9	Unmodified	_VFYIIRETI_					0	0	0		ENST00000521988.5_2_8:93898270-93898507:-|nuORF	ENST00000521988.5_2_8:93898270-93898507:-|nuORF	ENST00000521988.5_2_8:93898270-93898507:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1531249880791	3	385.225375	1152.6543	-0.44642	-0.00017197	0.78541	0.00030256	0.339	0.00013059	385.22586986780067	35.96	0.34071	37.237	37.087	37.428	1.2762					31	18	2	0	0	0	0.11891	1	15126	15126		0.26902	0	1	4683000			36203	7088	17951	18029	42341	42341					0.08407462062564264
VFYIIRETI	9	Unmodified	_VFYIIRETI_					0	0	0		ENST00000521988.5_2_8:93898270-93898507:-|nuORF	ENST00000521988.5_2_8:93898270-93898507:-|nuORF	ENST00000521988.5_2_8:93898270-93898507:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1529724001884	3	385.225375	1152.6543	0.5543	0.00021353	-1.605	-0.00061828	-1.0507	-0.00040475	385.55921124197215	35.438	0.13992	37.256	37.184	37.324	1.8176					12	10	2	0	0	0	0.11891	1	14882	14882		0.26902	0	1	10254000			36204	7088	17951	18029	42342	42342					0.08407462062564264
VFYPYPQYF	9	Unmodified	_VFYPYPQYF_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.2936279177666	2	612.292225	1222.5699	3.3809	0.0020701	-1.1785	-0.00072159	2.2024	0.0013485	612.2915779289899	73.68	0.50002	74.998	74.748	75.248	1.318					47	15	4	0	0	0	0.01705	2	30954	30916;30954		101.72	78.986	1	9286500			36205	1419	17952	18030	42343;42344	42344					-0.032484887542068464
VFYPYPQYF	9	Unmodified	_VFYPYPQYF_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.2931396365166	2	612.292225	1222.5699	2.551	0.001562	-1.1306	-0.00069228	1.4204	0.0008697	612.2917806506802	73.236	0.47168	75.046	74.797	75.268	1.8101					45	14	4	0	0	0	0.0068741	3	30718	30673;30718;30757		114.94	78.817	1	8669300			36206	1419	17952	18030	42345;42346;42347	42346					-0.032484887542068464
VGAAPGQR	8	Unmodified	_VGAAPGQR_					0	0	0			REV__ENST00000303657.9_1_19:6007742-6016199:-|nuORF	REV__ENST00000303657.9_1_19:6007742-6016199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2116882205009	2	378.211569	754.408586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.376	1	39.196	38.696	39.696	1.8202								0	0	0	1.0178	1	15681	15681		2.5775	0	1		+		36207	12326	17953	18031	42348	42348					0.021558067232263056
VGACFFFFF	9	Unmodified	_VGACFFFFF_					0	0	0		ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.8304931521416	2	542.751682	1083.48881	2.8893	0.0015682	1.3173	0.00071495	4.2065	0.0022831	542.7520649600334	62.55	0.27025	63.963	63.775	64.045	1.4134					16	8	3	0	0	0	0.085957	1	26173	26173		28.173	11.087	1	1684600			36208	5671	17954	18032	42349	42349					-0.04959467997923639
VGACFFFFF	9	Unmodified	_VGACFFFFF_					0	0	0		ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	542.8283569216728	2	542.751682	1083.48881	2.9802	0.0016175	4.274	0.0023197	7.2542	0.0039372	542.7532958313031	62.017	0.30421	63.974	63.815	64.12	1.9571					23	9	4	0	0	0	0.085957	1	26006	26006		20.871	12.278	1	1535500			36209	5671	17954	18032	42350	42350					-0.04959467997923639
VGACFFFFF	9	Unmodified	_VGACFFFFF_					0	0	0		ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	ENST00000269499.9_2_18:60244002-60244146:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	542.751682	1083.48881	1.7613	0.00095594	1.4257	0.00077381	3.187	0.0017297	542.7522153090933	63.997	0.22294	63.997	63.92	64.143	0	0.018991	-0.00051042	NaN	14.582	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370920			36210	5671	17954	18032							-0.04959467997923639
VGADPVDW	8	Unmodified	_VGADPVDW_					0	0	0			REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	858.3968994021416	1	858.399209	857.391933	1.9945	0.001712	-2.1422	-0.0018389	-0.14775	-0.00012683	858.3967285436458	48.647	0.16047	48.647	48.552	48.713	0					7	4	2	0	0	0	0.87106	1	20306	20306		14.582	6.6715	1	410460	+		36211	12019	17955	18033	42351	42351					-0.042467389533840105
VGAELALS	8	Unmodified	_VGAELALS_					0	0	0			REV__ENST00000441052.1_1_7:44079131-44079272:+|nuORF	REV__ENST00000441052.1_1_7:44079131-44079272:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2173950076103	2	380.215986	758.417419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.806	1	28.077	27.577	28.577	0.27119								0	0	0	1.0178	1	11629	11629		2.5775	0	1		+		36212	13083	17956	18034	42352	42352					0.02854735569053446
VGAEVGGL	8	Unmodified	_VGAEVGGL_					0	0	0		ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2423583865166	2	351.195054	700.375555	-0.15672	-5.5039E-05	3.4565	0.0012139	3.2998	0.0011589	351.19622889336574	16.788	0.35578	18.09	17.909	18.264	1.3023					15	11	2	0	0	0	2.3239	1	6897	6897		0.79363	0.79363	1	597820			36213	5650	17957	18035	42353	42353					0.013381798805426115
VGAEVGGL	8	Unmodified	_VGAEVGGL_					0	0	0		ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.2432739138603	2	351.195054	700.375555	-0.080285	-2.8196E-05	4.3668	0.0015336	4.2865	0.0015054	351.1967034330508	18.555	0.48674	20.003	19.908	20.395	1.448					18	15	2	0	0	0	2.3239	1	7698	7698		0	0	1	264980			36214	5650	17957	18035	42354	42354					0.013381798805426115
VGAEVGGL	8	Unmodified	_VGAEVGGL_					0	0	0		ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	ENST00000264607.8_1_2:239355417-239355468:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	351.195054	700.375555	-0.56415	-0.00019813	5.9058	0.0020741	5.3417	0.001876	351.19785106321524	19.068	0.2229	20.127	20.005	20.228	1.0585	0.062136	0.00091026	NaN	0	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	274920			36215	5650	17957	18035							0.013381798805426115
VGAFAAPT	8	Unmodified	_VGAFAAPT_					0	0	0		tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	733.3909179568291	1	733.387916	732.38064	1.3793	0.0010116	2.4373	0.0017875	3.8166	0.002799	733.3895972678943	104.82	0.10992	104.82	104.75	104.86	0					13	5	3	0	0	0	0.89178	1	44330	44330		0.69038	0	1	129420000			36216	16404	17958	18036	42355	42355					0.0037448374314408284
VGAFAAPT	8	Unmodified	_VGAFAAPT_					0	0	0		tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	tr|A0A553SMZ6|A0A553SMZ6_NIACIProcessedacidicsurfaceproteinOS=NialliacirculansOX=1397GN=CEQ21_23505PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	733.387916	732.38064	2.6618	0.0019521	-0.50311	-0.00036898	2.1587	0.0015831	733.3876142164938	104.7	0.077957	104.88	104.82	104.9	0.1731	0.01997	-0.0016302	NaN	0.69038	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11240000			36217	16404	17958	18036							0.0037448374314408284
VGAGASGG	8	Unmodified	_VGAGASGG_					0	0	0		ENST00000478979.5_1_16:774909-776367:-|nuORF;nc|ENSG00000162004|A2IDD5-4|CCDC78;ENST00000485091.5_1_16:774765-776367:-|nuORF;nc|ENSG00000162004|A2IDD5-6|CCDC78;nc|ENSG00000162004|A2IDD5-3|CCDC78;nc|ENSG00000162004|A2IDD5-5|CCDC78;ENST00000482878.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	ENST00000478979.5_1_16:774909-776367:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.2806884646416	1	575.278366	574.271089	1.8818	0.0010826	3.34	0.0019214	5.2218	0.003004	575.2802625998617	50.031	0.2763	50.031	49.843	50.12	0					11	8	2	0	0	0	0.89176	1	20860	20860		0.79363	0	1	587480			36218	6807	17959	18037	42356	42356					-0.03307521876172359
VGAGASLL	8	Unmodified	_VGAGASLL_					0	0	0		ENST00000583834.5_1_17:72767865-72768287:-|nuORF	ENST00000583834.5_1_17:72767865-72768287:-|nuORF	ENST00000583834.5_1_17:72767865-72768287:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2067748904228	2	344.205421	686.39629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.121	1	18.019	17.519	18.519	0.89794								0	0	0	1.0178	1	7126	7126		0.79363	0	1				36219	7445	17960	18038	42357	42357					0.040547702601998026
VGAGHAGS	8	Unmodified	_VGAGHAGS_					0	0	0		tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1611511111259	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.636	1	23.636	23.136	24.136	0								0	0	0	1.0178	1	9855	9855		0.79363	0	1				36220	17123	17961	18039	42358	42358					-0.032444306105617216
VGAGHAGS	8	Unmodified	_VGAGHAGS_					0	0	0		tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	tr|A0A7D6ZQE2|A0A7D6ZQE2_9CLOTtRNAuridine5-carboxymethylaminomethylmodificationenzymeMnmGOS=ClostridiumintestinaleOX=36845GN=mnmGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	328.1609680056572	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.274	1	24.274	23.774	24.774	0								0	0	0	1.0178	1	10124	10124		0.79363	0	1				36221	17123	17961	18039	42359	42359					-0.032444306105617216
VGAGPCGL	8	Unmodified	_VGAGPCGL_					0	0	0		ENST00000456101.6_1_6:109773431-109775944:-|nuORF;MICAL1|p.G901Afs*11|1|0.19|ENSG00000135596|chr6:109445501-109445502|-/ACCCAGAAGACCTGGGCTG|frameshift_variant;nc|ENSG00000135596|Q8TDZ2-2|MICAL1;ENSG00000135596|ENST00000358807|MICAL1;nc|ENSG00000135596|Q8TDZ2-4|MICAL1	ENST00000456101.6_1_6:109773431-109775944:-|nuORF	ENST00000456101.6_1_6:109773431-109775944:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.7003967165947	2	337.170524	672.326496	1.1198	0.00037756	-3.0097	-0.0010148	-1.8899	-0.00063721	337.1694703093841	54.603	0.31604	56.572	56.379	56.695	1.9684					17	10	2	0	0	0	2.3239	1	22868	22868		2.8892	0	1	3162200			36222	2675	17962	18040	42360	42360					-0.022774316800678207
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3058959841728	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.029	1	16.029	15.529	16.529	0								0	0	0	0.63775	1	6656	6656		0.45452	0.31463	1		+		36223	14314	17963	18041	42361	42361					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3049804568291	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.588	1	18.588	18.088	19.088	0								0	0	0	0.63775	1	7726	7726		1.3296	0.63198	1		+		36224	14314	17963	18041	42362	42362					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3052245974541	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.413	1	19.413	18.913	19.913	0								0	0	0	0.63775	1	8068	8068		1.3296	0.63198	1		+		36225	14314	17963	18041	42363	42363					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3062621951103	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.376	1	22.376	21.876	22.876	0								0	0	0	0.63775	1	9307	9307		1.3296	0.63198	1		+		36226	14314	17963	18041	42364	42364					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3068115115166	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.948	1	31.948	31.448	32.448	0								0	0	0	0.63775	1	13383	13383		0.45452	0.31463	1		+		36227	14314	17963	18041	42365	42365					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3061096072197	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.777	1	12.471	11.971	12.971	0.69396								0	0	0	0.63775	1	4892	4892		1.3296	0.63198	1		+		36228	14314	17963	18041	42366	42366					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3060485720634	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.094	1	12.788	12.288	13.288	0.69396								0	0	0	0.63775	1	5025	5025		1.3296	0.63198	1		+		36229	14314	17963	18041	42367	42367					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3056518435478	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.219	1	12.913	12.413	13.413	0.69396								0	0	0	0.63775	1	5076	5076		1.3296	0.63198	1		+		36230	14314	17963	18041	42368	42368					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3062927126884	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.347	1	13.041	12.541	13.541	0.69396								0	0	0	0.63775	1	5129	5129		1.3296	0.63198	1		+		36231	14314	17963	18041	42369	42369					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3056823611259	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.593	1	13.287	12.787	13.787	0.69396								0	0	0	0.63775	1	5230	5230		1.3296	0.63198	1		+		36232	14314	17963	18041	42370	42370					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3057739138603	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.722	1	13.416	12.916	13.916	0.69396								0	0	0	0.63775	1	5283	5283		0.45452	0.31463	1		+		36233	14314	17963	18041	42371	42371					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3068725466728	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.046	1	13.772	13.272	14.272	0.72639								0	0	0	0.63775	1	5416	5416		1.3296	0.63198	1		+		36234	14314	17963	18041	42372	42372					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3059265017509	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.403	1	14.129	13.629	14.629	0.72639								0	0	0	0.63775	1	5564	5564		1.3296	0.63198	1		+		36235	14314	17963	18041	42373	42373					0.27310751578238524
VGAKKKKKKKK	11	Unmodified	_VGAKKKKKKKK_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|27|1|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	424.3060180544853	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.369	1	16.409	15.909	16.909	1.0392								0	0	0	0.63775	1	6376	6376		0.45452	0.31463	1		+		36236	14314	17963	18041	42374	42374					0.27310751578238524
VGAKKRKGNA	10	Unmodified	_VGAKKRKGNA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8232910037041	2	514.819807	1027.62506	2.3753	0.0012229	2.2218	0.0011438	4.5972	0.0023667	514.8224387128736	43.774	1.4366	45.128	44.825	46.262	1.3536					58	45	2	0	0	0	0.77604	1	18508	18508		14.838	0.93222	1	2563200	+		36237	14311	17964	18042	42375	42375					0.1123536255693125
VGAKKRKGNA	10	Unmodified	_VGAKKRKGNA_					0	0	0			REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	REV__L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|23|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8238403201103	2	514.819807	1027.62506	2.285	0.0011763	1.3281	0.00068371	3.613	0.0018601	514.8221955695192	43.111	1.2481	45.032	44.751	45.999	1.9211					52	40	2	0	0	0	0.57775	1	18003	18003		24.021	0.87215	1	2314200	+		36238	14311	17964	18042	42376	42376					0.1123536255693125
VGAKRRQKVGP	11	Unmodified	_VGAKRRQKVGP_					0	0	0			REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2509338259697	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.443	1	19.891	19.391	20.391	1.448								0	0	0	0.63775	1	7671	7671		1.3296	0.25818	1		+	+	36239	14162	17965	18043	42377	42377					0.14134698402403956
VGAKRRQKVGP	11	Unmodified	_VGAKRRQKVGP_					0	0	0			REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	REV__FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2512390017509	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.03	1	23.646	23.146	24.146	1.6158								0	0	0	0.63775	1	9191	9191		0.50596	0.27011	1		+	+	36240	14162	17965	18043	42378	42378					0.14134698402403956
VGAKSPNL	8	Unmodified	_VGAKSPNL_					0	0	0		nc|ENSG00000141449|Q9C091-3|GREB1L;ENSG00000141449|ENST00000424526|GREB1L;nc|ENSG00000141449|Q9C091-4|GREB1L;ENST00000578368.5_1_18:18963479-19048745:+|nuORF;ENST00000584446.5_1_18:18963479-19034595:+|nuORF	nc|ENSG00000141449|Q9C091-3|GREB1L	nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2285949587822	2	393.229428	784.444303	1.8675	0.00073435	-3.1269	-0.0012296	-1.2594	-0.00049525	393.22806508081476	65.711	0.42973	67.11	66.849	67.279	1.3989					32	13	3	0	0	0	0.89176	1	27538	27538		0.79363	0	1	9243400			36241	2959	17966	18044	42379	42379					0.04345844180215863
VGALKQVF	8	Unmodified	_VGALKQVF_					0	0	0			REV__ENSG00000186648|ENST00000342740|CARMIL3	REV__ENSG00000186648|ENST00000342740|CARMIL3	MSMS	GG20161007_CRH_Patient100_A02_01	1	431.2635986208916	2	431.263271	860.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.27	1	103.27	102.77	103.77	0								0	0	0	1.0178	1	43315	43315		0.79363	0	1		+		36242	11506	17967	18045	42380	42380					0.07615294111042203
VGALPSGG	8	Unmodified	_VGALPSGG_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3570434451103	1	657.356616	656.34934	0.96372	0.00063351	0.86674	0.00056976	1.8305	0.0012033	657.357169374891	17.318	1.1548	17.318	16.531	17.686	0					51	36	2	0	0	0	0.87803	1	7176	7176		10.183	0.83596	1	391120	+		36243	12059	17968	18046	42381	42381					0.007419107090527177
VGALPSGG	8	Unmodified	_VGALPSGG_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3568603396416	1	657.356616	656.34934	0.99468	0.00065386	-0.73765	-0.0004849	0.25703	0.00016896	657.3561430581856	17.934	0.40238	17.934	17.686	18.088	0					22	12	2	0	0	0	0.87803	1	7413	7413		10.183	0.83596	1	609920	+		36244	12059	17968	18046	42382	42382					0.007419107090527177
VGALPSGG	8	Unmodified	_VGALPSGG_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	657.3561279177666	1	657.356616	656.34934	0.37667	0.00024761	0.93854	0.00061696	1.3152	0.00086457	657.3571647583406	17.642	0.54202	17.814	17.533	18.075	0.17285					23	17	2	0	0	0	0.88504	1	7366	7366		5.7604	0	1	554350	+		36245	12059	17968	18046	42383	42383					0.007419107090527177
VGALPSGG	8	Unmodified	_VGALPSGG_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3571044802666	1	657.356616	656.34934	0.22589	0.00014849	0.9128	0.00060004	1.1387	0.00074852	657.3572164753986	16.964	0.42911	17.862	17.708	18.137	0.89794					22	14	2	0	0	0	0.87803	1	7068	7068		10.183	0.83596	1	540470	+		36246	12059	17968	18046	42384	42384					0.007419107090527177
VGALPSGG	8	Unmodified	_VGALPSGG_					0	0	0			REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	REV__ENST00000206542.8_1_14:20922909-20923149:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	657.356616	656.34934	0.34549	0.00022711	1.6329	0.0010734	1.9784	0.0013005	657.3576034249243	17.113	0.55604	17.264	16.933	17.489	0.15093	-0.028986	0.00015542	NaN	10.183	25	19	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	561710	+		36247	12059	17968	18046							0.007419107090527177
VGALTLLATAV	11	Unmodified	_VGALTLLATAV_					0	0	0		nc|ENSG00000174151|Q8N8Q1-5|CYB561D1;ENSG00000174151|ENST00000420578|CYB561D1;ENST00000430195.2_1_1:110037168-110038878:+|nuORF;nc|ENSG00000174151|Q8N8Q1-3|CYB561D1	nc|ENSG00000174151|Q8N8Q1-5|CYB561D1	nc|ENSG00000174151|Q8N8Q1-5|CYB561D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8232910037041	2	514.82115	1027.62775	2.285	0.0011763	-1.28	-0.00065896	1.005	0.00051739	514.8221955695192	43.111	1.2481	45.032	44.751	45.999	1.9211					52	40	2	0	0	0	0.74096	1	18111	18111		17.113	0.1706	1	2314200			36248	4318	17969	18047	42385	42385					0.1150377317121638
VGAMLGHTI	9	Unmodified	_VGAMLGHTI_					0	0	0			REV__ENSG00000141934|ENST00000434325|PLPP2	REV__ENSG00000141934|ENST00000434325|PLPP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	898.4776489138603	1	898.481499	897.474223	1.0458	0.00093967	-2.4986	-0.002245	-1.4528	-0.0013053	898.4787633534895	58.6	0.31987	60.018	59.877	60.196	1.4181					13	9	2	0	0	0	0.5697	1	24579	24579		12.532	3.1841	1	1293400	+		36249	10167	17970	18048	42386	42386					0.02138459853938457
VGAMLGHTI	9	Unmodified	_VGAMLGHTI_					0	0	0			REV__ENSG00000141934|ENST00000434325|PLPP2	REV__ENSG00000141934|ENST00000434325|PLPP2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	898.481499	897.474223	1.0458	0.00093967	-2.4986	-0.002245	-1.4528	-0.0013053	898.4787633534895	58.6	0.31987	60.018	59.877	60.196	1.4181	-0.041234	-1.1849E-05	NaN	12.532	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1293400	+		36250	10167	17970	18048							0.02138459853938457
VGAPAAGM	8	Unmodified	_VGAPAAGM_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;ENST00000474114.5_1_21:45741509-45744801:+|nuORF;ENST00000498841.5_1_21:45739892-45744801:+|nuORF;ENST00000466134.5_1_21:45739892-45745863:+|nuORF;ENST00000460521.5_1_21:45741509-45746742:+|nuORF;ENST00000467315.5_1_21:45739892-45746742:+|nuORF;ENST00000547581.5_1_12:48529049-48539488:+|nuORF;nc|ENSG00000152556|P08237-2|PFKM;ENSG00000152556|ENST00000359794|PFKM;ENSG00000141959|ENST00000349048|PFKL;nc|ENSG00000141959|P17858-2|PFKL;ENST00000397961.6_1_21:45725201-45746742:+|nuORF;nc|ENSG00000152556|P08237-3|PFKM	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9025451540947	2	337.170524	672.326496	0.27276	9.1965E-05	-2.2256	-0.0007504	-1.9528	-0.00065844	337.1696909558255	55.012	0.45957	56.416	56.182	56.642	1.4048					24	15	2	0	0	0	2.3239	1	23110	23110		2.8892	0	1	2682200			36251	816	17971	18049	42387	42387					-0.022774316800678207
VGAPAVKL	8	Unmodified	_VGAPAVKL_					0	0	0			REV__ENSG00000143315|ENST00000368090|PIGM	REV__ENSG00000143315|ENST00000368090|PIGM	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7466308474541	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.969	1	68.358	67.858	68.858	1.3888								0	0	0	1.0178	1	28091	28091		2.5775	1.7838	1		+		36252	10200	17972	18050	42388	42388					0.08827622565274851
VGAPAVKL	8	Unmodified	_VGAPAVKL_					0	0	0			REV__ENSG00000143315|ENST00000368090|PIGM	REV__ENSG00000143315|ENST00000368090|PIGM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7459594607353	2	377.744714	753.474875	2.3343	0.00088176	1.9497	0.00073647	4.2839	0.0016182	377.74521705315453	69.897	1.4148	71.735	70.783	72.198	1.8378					61	44	2	0	0	0	0.89008	1	29354	29354		2.5775	0	1	6872900	+		36253	10200	17972	18050	42389	42389					0.08827622565274851
VGAPGGSS	8	Unmodified	_VGAPGGSS_					0	0	0			REV__ENSG00000212123|ENST00000419421|PRR22	REV__ENSG00000212123|ENST00000419421|PRR22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.3057739138603	1	631.304581	630.297304	2.2831	0.0014413	1.3816	0.00087219	3.6646	0.0023135	631.3052288027784	61.841	0.37344	63.798	63.625	63.999	1.9571					14	11	2	0	0	0	0.88958	1	25957	25957		2.8892	0	1	709220	+		36254	11832	17973	18051	42390	42390					-0.03263252704709885
VGAPGGSS	8	Unmodified	_VGAPGGSS_					0	0	0			REV__ENSG00000212123|ENST00000419421|PRR22	REV__ENSG00000212123|ENST00000419421|PRR22	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	631.304581	630.297304	2.251	0.001421	4.1477	0.0026185	6.3986	0.0040395	631.3068015297341	64.194	0.3501	64.194	63.983	64.333	0	0.20382	0.00042207	NaN	2.8892	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	692180	+		36255	11832	17973	18051							-0.03263252704709885
VGAPGGSS	8	Unmodified	_VGAPGGSS_					0	0	0			REV__ENSG00000212123|ENST00000419421|PRR22	REV__ENSG00000212123|ENST00000419421|PRR22	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	631.304581	630.297304	1.8054	0.0011397	3.403	0.0021483	5.2084	0.0032881	631.3066833536333	63.649	0.45197	63.978	63.725	64.177	0.32899	-0.011798	-4.8044E-05	NaN	2.8892	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1199300	+		36256	11832	17973	18051							-0.03263252704709885
VGAPGGSS	8	Unmodified	_VGAPGGSS_					0	0	0			REV__ENSG00000212123|ENST00000419421|PRR22	REV__ENSG00000212123|ENST00000419421|PRR22	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	631.304581	630.297304	2.2831	0.0014413	1.3816	0.00087219	3.6646	0.0023135	631.3052288027784	61.841	0.37344	63.798	63.625	63.999	1.9571	-0.19203	-0.0013242	NaN	2.8892	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	709220	+		36257	11832	17973	18051							-0.03263252704709885
VGAPLSGG	8	Unmodified	_VGAPLSGG_					0	0	0			REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	657.3583862185478	1	657.356616	656.34934	0.96372	0.00063351	0.86674	0.00056976	1.8305	0.0012033	657.357169374891	17.318	1.1548	17.318	16.531	17.686	0					51	36	2	0	0	0	0.88504	1	7231	7231		5.7604	0	1	391120	+		36258	12446	17974	18052	42391	42391					0.007419107090527177
VGAPLSGG	8	Unmodified	_VGAPLSGG_					0	0	0			REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	657.3561279177666	1	657.356616	656.34934	0.34549	0.00022711	1.6329	0.0010734	1.9784	0.0013005	657.3576034249243	17.113	0.55604	17.264	16.933	17.489	0.15093					25	19	2	0	0	0	0.88504	1	7126	7126		5.7604	0	1	561710	+		36259	12446	17974	18052	42392	42392					0.007419107090527177
VGAPLSGG	8	Unmodified	_VGAPLSGG_					0	0	0			REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	REV__ENST00000331457.8_1_22:31795578-31795629:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.3582641482353	1	657.356616	656.34934	0.19919	0.00013094	1.6442	0.0010808	1.8434	0.0012118	657.357539017275	16.257	0.69509	17.297	16.861	17.556	1.0392					30	27	2	0	0	0	0.88504	1	6799	6799		5.7604	0	1	668670	+		36260	12446	17974	18052	42393	42393					0.007419107090527177
VGAQATFR	8	Unmodified	_VGAQATFR_					0	0	0			REV__AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|20|3|anti-sense	REV__AluJr4_dup16917|chr16:69374357-69374684:+|2.433971777808144|0.0235263945213815|6.69|429.0|20|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	425.2332031130791	2	425.232502	848.450451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.643	1	18.946	18.446	19.446	1.3023								0	0	0	1.0178	1	7328	7328		2.5775	0	1		+		36261	8105	17975	18053	42394	42394					0.020163624117685686
VGAQFQTFSL	10	Unmodified	_VGAQFQTFSL_					0	0	0			REV__tr|A0A553SPY9|A0A553SPY9_NIACIPhosphate/phosphonateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13470PE=3SV=1	REV__tr|A0A553SPY9|A0A553SPY9_NIACIPhosphate/phosphonateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_13470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.5265075564384	3	366.525713	1096.55531	-0.96129	-0.00035234	3.1674	0.0011609	2.2061	0.0008086	366.5268761425327	14.672	0.41044	15.441	15.233	15.643	0.76937					22	13	3	0	0	0	0.87699	1	6089	6089		1.9064	0	1	694030	+		36262	15114	17976	18054	42395	42395					0.010894390976545765
VGARKTSVR	9	Unmodified	_VGARKTSVR_					0	0	0		ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.2007324099541	3	325.201564	972.582862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.07	1	102.07	101.57	102.57	0								0	0	0	0.42693	1	42752	42752		0.26902	0	1				36263	6945	17977	18055	42396	42396					0.09547387148563757
VGARKTSVR	9	Unmodified	_VGARKTSVR_					0	0	0		ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	ENST00000495366.5_1_3:8675888-8681636:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.2019836306572	3	325.201564	972.582862	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.52	1	101.59	101.09	102.09	0.067009								0	0	0	0.42693	1	42507	42507		0.26902	0	1				36264	6945	17977	18055	42397	42397					0.09547387148563757
VGARPLVS	8	Unmodified	_VGARPLVS_					0	0	0			REV__ENST00000591325.1_1_19:58790629-58791205:+|nuORF	REV__ENST00000591325.1_1_19:58790629-58791205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7462036013603	2	399.745245	797.475937	2.7003	0.0010794	0.64533	0.00025797	3.3456	0.0013374	399.745264843024	104.47	0.093407	104.63	104.56	104.66	0.16055					11	4	3	0	0	0	0.89008	1	44257	44257		2.5775	0	1	59707000	+		36265	14070	17978	18056	42398	42398					0.06909836934187297
VGARPLVS	8	Unmodified	_VGARPLVS_					0	0	0			REV__ENST00000591325.1_1_19:58790629-58791205:+|nuORF	REV__ENST00000591325.1_1_19:58790629-58791205:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7462341189384	2	399.745245	797.475937	3.1037	0.0012407	0.16132	6.4487E-05	3.265	0.0013052	399.74496549398833	104.42	0.21142	104.59	104.49	104.7	0.1731					19	10	4	0	0	0	0.89008	1	44173	44173		2.5775	0	1	53833000	+		36266	14070	17978	18056	42399	42399					0.06909836934187297
VGASKIRML	9	Unmodified	_VGASKIRML_					0	0	0		nc|ENSG00000160746|Q9NW15-2|ANO10;nc|ENSG00000160746|Q9NW15-5|ANO10;ENSG00000160746|ENST00000292246|ANO10	nc|ENSG00000160746|Q9NW15-2|ANO10	nc|ENSG00000160746|Q9NW15-2|ANO10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	487.2830078005791	2	487.794412	973.574271	2.0635	0.0010066	1.9499	0.00095116	4.0134	0.0019577	487.79511345666344	69.593	0.18671	69.915	69.847	70.034	0.32224					8	5	2	0	0	0	0.11833	1	29100	29100		4.3292	1.44	1	547360			36267	3571	17979	18057	42400	42400					0.08642697187735848
VGASLLAWRM	10	Unmodified	_VGASLLAWRM_					0	0	0		nc|ENSG00000167851|Q9UGN4-4|CD300A;nc|ENSG00000167851|Q9UGN4-2|CD300A;ENST00000582319.5_1_17:72462842-72477477:+|nuORF;ENSG00000167851|ENST00000360141|CD300A	nc|ENSG00000167851|Q9UGN4-4|CD300A	nc|ENSG00000167851|Q9UGN4-4|CD300A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.3096191287041	2	552.305144	1102.59573	4.593	0.0025367	3.3757	0.0018644	7.9687	0.0044012	552.3061371257922	88.046	0.35201	89.493	89.316	89.668	1.4467					22	10	3	0	0	0	0.89803	1	37117	37117		1.6526	0.17072	1	2875200			36268	3998	17980	18058	42401	42401					0.048540822164113706
VGASRLLG	8	Unmodified	_VGASRLLG_					0	0	0			REV__ENSG00000213903|ENST00000345363|LTB4R	REV__ENSG00000213903|ENST00000345363|LTB4R	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	772.4713012576103	1	772.467564	771.460287	1.3225	0.0010216	2.3646	0.0018266	3.6871	0.0028482	772.469762193663	100.74	0.17951	100.74	100.63	100.81	0					8	5	2	0	0	0	0.89176	1	42183	42183		0.79363	0	1	2622600	+		36269	11843	17981	18059	42402	42402					0.06541550417148301
VGASRLLG	8	Unmodified	_VGASRLLG_					0	0	0			REV__ENSG00000213903|ENST00000345363|LTB4R	REV__ENSG00000213903|ENST00000345363|LTB4R	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	772.467564	771.460287	1.3225	0.0010216	2.3646	0.0018266	3.6871	0.0028482	772.469762193663	100.74	0.17951	100.74	100.63	100.81	0	-0.014473	0.00037416	NaN	0.79363	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2622600	+		36270	11843	17981	18059							0.06541550417148301
VGASRLLG	8	Unmodified	_VGASRLLG_					0	0	0			REV__ENSG00000213903|ENST00000345363|LTB4R	REV__ENSG00000213903|ENST00000345363|LTB4R	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	772.467564	771.460287	2.7377	0.0021148	0.44374	0.00034277	3.1814	0.0024576	772.4681654939253	100.69	0.12187	100.77	100.69	100.81	0.072716	0.014473	-0.0011097	NaN	0.79363	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	703870	+		36271	11843	17981	18059							0.06541550417148301
VGATCATP	8	Unmodified	_VGATCATP_					0	0	0		ENSG00000100399|ENST00000216241|CHADL	ENSG00000100399|ENST00000216241|CHADL	ENSG00000100399|ENST00000216241|CHADL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	719.3398925662041	1	719.339252	718.331975	2.6158	0.0018816	-1.684	-0.0012114	0.93175	0.00067025	719.3380308566425	103.53	0.16774	103.71	103.62	103.78	0.18066					16	7	3	0	0	0	0.89176	1	43620	43620		0.79363	0	1	39152000			36272	1273	17982	18060	42403	42403					-0.03845752888275911
VGATKKQK	8	Unmodified	_VGATKKQK_					0	0	0		tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	430.2742492556572	2	430.271627	858.528701	3.1153	0.0013404	2.2007	0.00094692	5.316	0.0022873	430.27303348989284	104.48	0.072296	104.54	104.51	104.59	0.056801					6	3	2	0	0	0	0.89176	1	44094	44094		0.79363	0	1	18348000			36273	16038	17983	18061	42404	42404					0.09377794996987632
VGATKVPRN	9	Unmodified	_VGATKVPRN_					0	0	0		ENST00000549413.1_1_12:56355068-56359795:-|nuORF;ENST00000550590.5_1_12:56352149-56359825:-|nuORF;nc|ENSG00000185664|P40967-4|PMEL;nc|ENSG00000185664|P40967-5|PMEL;ENSG00000185664|ENST00000548747|PMEL;nc|ENSG00000185664|P40967-2|PMEL	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	ENST00000549413.1_1_12:56355068-56359795:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	471.2808105349541	2	471.279983	940.545414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.454	1	55.775	55.275	56.275	0.32088								0	0	0	0.42693	1	23216	23216		2.0598	0	1				36274	4755	17984	18062	42405	42405					0.0727629588294576
VGATLLGLAAA	11	Unmodified	_VGATLLGLAAA_					0	0	0			REV__nc|ENSG00000197965|O95297-3|MPZL1	REV__nc|ENSG00000197965|O95297-3|MPZL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.7937194705009	2	478.792392	955.570232	2.5289	0.0012108	-0.13847	-6.6298E-05	2.3904	0.0011445	478.7923515961977	50.045	0.75087	50.375	50.169	50.92	0.33019					53	23	4	0	0	0	0.37492	1	21047	21047		27.629	0	1	25816000	+		36275	11695	17985	18063	42406	42406					0.09066930965650499
VGATRIQIALK	11	Unmodified	_VGATRIQIALK_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3759033083916	2	585.371872	1168.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.571	1	22.146	21.646	22.646	1.5748								0	0	0	0.63775	1	8559	8559		1.1933	0.735	1				36276	1835	17986	18064	42407	42407					0.15157644593773512
VGATRIQIALK	11	Unmodified	_VGATRIQIALK_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3754150271416	2	585.371872	1168.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.806	1	22.381	21.881	22.881	1.5748								0	0	0	0.63775	1	8663	8663		5.2969	1.3525	1				36277	1835	17986	18064	42408	42408					0.15157644593773512
VGATRIQIALK	11	Unmodified	_VGATRIQIALK_					0	0	0		ENSG00000113645|ENST00000265293|WWC1;nc|ENSG00000113645|Q8IX03-2|WWC1	ENSG00000113645|ENST00000265293|WWC1	ENSG00000113645|ENST00000265293|WWC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	585.3756591677666	2	585.371872	1168.72919	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.607	1	24.258	23.758	24.758	1.6511								0	0	0	0.63775	1	9437	9437		1.1933	0.735	1				36278	1835	17986	18064	42409	42409					0.15157644593773512
VGAVAVIF	8	Unmodified	_VGAVAVIF_					0	0	0		tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	tr|A0A7D6VN13|A0A7D6VN13_9CLOTStage0sporulationproteinAhomologOS=ClostridiumintestinaleOX=36845GN=HZF06_15725PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1281616091728	2	388.239264	774.463976	1.6513	0.00064111	-0.98208	-0.00038128	0.66925	0.00025983	388.238457101666	40.053	0.6471	40.365	39.955	40.602	0.31263					26	20	2	0	0	0	2.3239	1	16861	16861		2.8892	0	1	758050			36279	16722	17987	18065	42410	42410					0.06772220190987355
VGAVGLVHTLI	11	Unmodified	_VGAVGLVHTLI_					0	0	0			REV__ENSG00000127603|ENST00000564288|MACF1	REV__ENSG00000127603|ENST00000564288|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8347045779228	2	539.834591	1077.65463	1.7724	0.0009568	-2.1582	-0.001165	-0.38577	-0.00020825	539.8332885793919	78.457	0.53171	78.766	78.516	79.047	0.30933					39	16	3	0	0	0	1.0357	1	32756	32756		1.4819	0.8804	1	1369800	+		36280	9720	17988	18066	42411	42411					0.11890881782437646
VGAVKQEP	8	Unmodified	_VGAVKQEP_					0	0	0		nc|ENSG00000060749|Q2KHR3-2|QSER1;nc|ENSG00000060749|Q2KHR3|QSER1;ENSG00000060749|ENST00000650167|QSER1	nc|ENSG00000060749|Q2KHR3-2|QSER1	nc|ENSG00000060749|Q2KHR3-2|QSER1	MSMS	GG20161007_CRH_Patient100_A02_01	1	414.2347900271416	2	414.23471	826.454868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.418	1	31.418	30.918	31.918	0								0	0	0	1.0178	1	13166	13166		2.8892	0	1				36281	748	17989	18067	42412	42412					0.03469826834657397
VGAVPGTDCGL	11	Unmodified	_VGAVPGTDCGL_					0	0	0			REV__ENST00000555210.1_1_15:92669436-92694191:+|nuORF	REV__ENST00000555210.1_1_15:92669436-92694191:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	494.7810241580009	2	494.742042	987.469531	3.025	0.0014966	2.5425	0.0012579	5.5676	0.0027545	494.743159511309	73.867	0.30707	75.663	75.471	75.778	1.7962					14	9	2	0	0	0	0.14493	1	30943	30943		10.824	0	1	252960	+		36282	11182	17990	18068	42413	42413					-0.02470469079491977
VGAVPLLR	8	Unmodified	_VGAVPLLR_					0	0	0			REV__ENST00000564098.5_1_16:1793488-1793863:+|nuORF	REV__ENST00000564098.5_1_16:1793488-1793863:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	824.5421020388603	1	824.535249	823.527973	2.8413	0.0023427	3.104	0.0025594	5.9453	0.0049021	824.5377108801938	109.46	0.35178	109.62	109.46	109.81	0.15898					53	14	5	0	0	0	0.88958	2	47604	47490;47604		2.8892	0	1	469500000	+		36283	13918	17991	18069	42414;42415	42415					0.10915000347949899
VGAVRKPV	8	Unmodified	_VGAVRKPV_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	413.2471496462822	2	413.268887	824.523222	3.1867	0.001317	-0.6128	-0.00025325	2.5739	0.0010637	413.2692221197699	104.42	0.074463	104.59	104.54	104.62	0.1731					5	3	2	0	0	0	2.3239	1	44185	44185		0.79363	0	1	10083000			36284	1327	17992	18070	42416	42416					0.10394116205179671
VGAVRKPV	8	Unmodified	_VGAVRKPV_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	413.268887	824.523222	0.066897	2.7646E-05	5.9694	0.002467	6.0363	0.0024946	413.27167546823136	104.5	0.071777	104.5	104.46	104.53	0	-0.042989	0.002937	NaN	0.79363	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4786900			36285	1327	17992	18070							0.10394116205179671
VGAVRKPV	8	Unmodified	_VGAVRKPV_					0	0	0		nc|ENSG00000101191|Q9BTC0-1|DIDO1;ENSG00000101191|ENST00000395343|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	nc|ENSG00000101191|Q9BTC0-1|DIDO1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	413.268887	824.523222	2.9623	0.0012242	2.4868	0.0010277	5.4491	0.0022519	413.2701555284725	104.48	0.072929	104.54	104.48	104.55	0.056801	-0.0024752	5.8457E-05	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5932700			36286	1327	17992	18070							0.10394116205179671
VGAVSWRVLLR	11	Unmodified	_VGAVSWRVLLR_					0	0	0		chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3859130740166	2	628.385314	1254.75608	1.7672	0.0011105	-3.0211	-0.0018984	-1.2539	-0.00078794	628.3832686380024	77.87	0.72878	78.18	77.912	78.641	0.30933					55	22	3	0	0	0	1.0357	1	32704	32704		1.4819	0.15237	1	1194800			36287	291	17993	18071	42417	42417					0.13888753204969362
VGAVSWRVLLR	11	Unmodified	_VGAVSWRVLLR_					0	0	0		chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	chr8:144359423-144360803|424|18.48|0.87|4.41|+|ENST00000526752|SLC52A2,SLC52A2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3842651247978	2	628.385314	1254.75608	2.2664	0.0014242	-2.414	-0.0015169	-0.14763	-9.2767E-05	628.3838232594044	76.203	2.1525	77.497	75.954	78.106	1.2938					92	69	2	0	0	0	1.0357	1	31887	31887		1.4819	0.15237	1	2610000			36288	291	17993	18071	42418	42418					0.13888753204969362
VGAVVNVGA	9	Unmodified	_VGAVVNVGA_					0	0	0			REV__tr|A0A7D6ZFN9|A0A7D6ZFN9_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_18635PE=4SV=1	REV__tr|A0A7D6ZFN9|A0A7D6ZFN9_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_18635PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2289916872978	2	393.229428	784.444303	1.8675	0.00073435	-3.1269	-0.0012296	-1.2594	-0.00049525	393.22806508081476	65.711	0.42973	67.11	66.849	67.279	1.3989					32	13	3	0	0	0	0.82604	1	27588	27588		2.3027	0	1	9243400	+		36289	15632	17994	18072	42419	42419					0.04345844180227232
VGAVVNVGA	9	Unmodified	_VGAVVNVGA_					0	0	0			REV__tr|A0A7D6ZFN9|A0A7D6ZFN9_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_18635PE=4SV=1	REV__tr|A0A7D6ZFN9|A0A7D6ZFN9_9CLOTECFtransporterScomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_18635PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	393.229428	784.444303	1.9274	0.00075791	-3.2281	-0.0012694	-1.3007	-0.00051147	393.2280313024365	66.632	0.5364	66.956	66.653	67.19	0.32449	0.049623	-0.00035088	NaN	2.3027	35	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6774300	+		36290	15632	17994	18072							0.04345844180227232
VGCGGGEQ	8	Unmodified	_VGCGGGEQ_					0	0	0		ENST00000588254.1_1_19:56000611-56002653:+|nuORF;nc|ENSG00000179954|A1L4H1-2|SSC5D;ENSG00000179954|ENST00000389623|SSC5D	ENST00000588254.1_1_19:56000611-56002653:+|nuORF	ENST00000588254.1_1_19:56000611-56002653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	706.2846557497978	1	706.282465	705.275189	1.3462	0.0009508	0.695	0.00049087	2.0412	0.0014417	706.2835412509573	27.065	1.4732	27.065	26.535	28.009	0					72	48	2	0	0	0	0.88958	1	11485	11485		2.8892	0	1	1966100			36291	4534	17995	18073	42420	42420					-0.08923800444790686
VGCGMHSL	8	Unmodified	_VGCGMHSL_					0	0	0		ENST00000549857.1_1_17:6918973-6919195:+|nuORF	ENST00000549857.1_1_17:6918973-6919195:+|nuORF	ENST00000549857.1_1_17:6918973-6919195:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800109744072	2	402.180566	802.346579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.849	1	34.127	33.627	34.627	1.2782								0	0	0	1.0178	1	13776	13776		2.8892	2.0956	1				36292	7254	17996	18074	42421	42421					-0.06250004011769761
VGCHGVGP	8	Unmodified	_VGCHGVGP_					0	0	0			REV__ENST00000490912.5_1_7:26240853-26240931:-|nuORF	REV__ENST00000490912.5_1_7:26240853-26240931:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.1725341677666	2	363.173598	724.332644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2071	1	1.2071	0.7071	1.7071	0								0	0	0	1.0178	1	495	495		2.8892	0	1		+		36293	13427	17997	18075	42422	42422					-0.04054913448555908
VGCICVEDN	9	Unmodified	_VGCICVEDN_					0	0	0		ENST00000475962.5_1_22:39516350-39545814:-|nuORF	ENST00000475962.5_1_22:39516350-39545814:-|nuORF	ENST00000475962.5_1_22:39516350-39545814:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1992675662041	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.261	1	36.261	35.761	36.761	0								0	0	0	0.42693	1	15202	15202		1.8442	1.0506	1				36294	6781	17998	18076	42423	42423					-0.09342377256677992
VGCICVEDN	9	Unmodified	_VGCICVEDN_					0	0	0		ENST00000475962.5_1_22:39516350-39545814:-|nuORF	ENST00000475962.5_1_22:39516350-39545814:-|nuORF	ENST00000475962.5_1_22:39516350-39545814:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.1996337771416	2	476.199153	950.383753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.764	1	50.764	50.264	51.264	0								0	0	0	0.42693	1	21174	21174		1.8442	0.19162	1				36295	6781	17998	18076	42424	42424					-0.09342377256677992
VGCIRPVN	8	Unmodified	_VGCIRPVN_					0	0	0			REV__ENSG00000111424|ENST00000549336|VDR	REV__ENSG00000111424|ENST00000549336|VDR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	429.2364379763603	2	429.23673	856.458907	1.2181	0.00052284	-0.51056	-0.00021915	0.7075	0.00030368	429.236401501721	54.159	0.85167	54.159	53.712	54.563	0					70	27	3	0	0	0	0.87935	1	22543	22543		9.3474	0	1	11857000	+		36296	9328	17999	18077	42425	42425					0.02493593056726695
VGCLIAEPIKQ	11	Unmodified	_VGCLIAEPIKQ_					0	0	0		ENSG00000171320|ENST00000305188|ESCO2;nc|ENSG00000171320|Q56NI9-2|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2850219607353	3	390.889886	1169.64783	1.9425	0.00075932	0.07062	2.7605E-05	2.0132	0.00078693	390.8891703585233	44.987	0.57214	46.353	46.088	46.66	1.3653					25	17	2	0	0	0	0.14606	1	18964	18964		1.4551	0.67859	1	1217800			36297	4184	18000	18078	42426	42426					0.06979200839509758
VGCLIAEPIKQ	11	Unmodified	_VGCLIAEPIKQ_					0	0	0		ENSG00000171320|ENST00000305188|ESCO2;nc|ENSG00000171320|Q56NI9-2|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	ENSG00000171320|ENST00000305188|ESCO2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2849304080009	3	390.889886	1169.64783	1.9463	0.00076078	0.19188	7.5005E-05	2.1382	0.00083578	390.8897349522291	44.383	0.95475	46.343	45.941	46.896	1.9596					37	29	2	0	0	0	0.14606	1	18724	18724		0.50596	0	1	754460			36298	4184	18000	18078	42427	42427					0.06979200839509758
VGCPPIGLGP	10	Unmodified	_VGCPPIGLGP_					0	0	0			REV__ENST00000244670.12_1_6:42988481-42988613:+|nuORF	REV__ENST00000244670.12_1_6:42988481-42988613:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	455.2492248415947	2	455.246763	908.478974	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.275	1	37.275	36.775	37.775	0								0	0	0	0.66155	1	15626	15626		1.8442	1.0506	1		+		36299	12132	18001	18079	42428	42428					0.021073439966926344
VGCTPGEF	8	Unmodified	_VGCTPGEF_					0	0	0			REV__ENSG00000187122|ENST00000266058|SLIT1	REV__ENSG00000187122|ENST00000266058|SLIT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1786682009697	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.818	1	22.995	22.495	23.495	1.177								0	0	0	1.0178	1	9114	9114		2.8892	0	1		+		36300	11528	18002	18080	42429	42429					-0.06929770233830368
VGDAWAPW	8	Unmodified	_VGDAWAPW_					0	0	0		ENST00000495957.1_1_8:22459568-22459924:+|nuORF	ENST00000495957.1_1_8:22459568-22459924:+|nuORF	ENST00000495957.1_1_8:22459568-22459924:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.2138854861259	2	451.213778	900.413003	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.847	1	34.671	34.171	35.171	1.8246								0	0	0	1.0178	1	13767	13767		0.79363	0	1				36301	6948	18003	18081	42430	42430					-0.041187288538708344
VGDFVRLR	8	Unmodified	_VGDFVRLR_					0	0	0		ENSG00000206190|ENST00000555815|ATP10A	ENSG00000206190|ENST00000555815|ATP10A	ENSG00000206190|ENST00000555815|ATP10A	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2825805544853	2	481.282526	960.550499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.296	1	89.743	89.243	90.243	1.4467								0	0	0	1.0178	1	37213	37213		0.79363	0	1				36302	5195	18004	18082	42431	42431					0.06864599745574651
VGDGPPDF	8	Unmodified	_VGDGPPDF_					0	0	0		ENST00000609075.5_1_2:70310793-70312954:-|nuORF;ENST00000442040.5_1_2:70278378-70312954:-|nuORF;ENST00000439670.6_1_2:70286789-70313441:-|nuORF	ENST00000609075.5_1_2:70310793-70312954:-|nuORF	ENST00000609075.5_1_2:70310793-70312954:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797363162041	2	402.182143	802.349734	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.572	1	15.341	14.841	15.841	0.76937								0	0	0	1.0178	1	6057	6057		2.8892	2.0956	1				36303	6548	18005	18083	42432	42432					-0.05934714361751503
VGDICESDFD	10	Unmodified	_VGDICESDFD_					0	0	0		ENSG00000113296|ENST00000350881|THBS4	ENSG00000113296|ENST00000350881|THBS4	ENSG00000113296|ENST00000350881|THBS4	MSMS	GG20161007_CRH_Patient100_A02_01	1	550.2186767458916	2	550.216054	1098.41756	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.178	1	73.178	72.678	73.678	0								0	0	0	0.66166	1	30467	30467		1.6526	0.96225	1				36304	1816	18006	18084	42433	42433					-0.12771677283922145
VGDIPGVRF	9	Unmodified	_VGDIPGVRF_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2697631716728	2	480.269084	958.523616	2.5294	0.0012148	-0.20277	-9.7385E-05	2.3266	0.0011174	480.26913653100183	45.155	0.35544	46.52	46.337	46.692	1.3653					22	10	3	0	0	0	0.17276	2	18914	18914;18969		36.127	9.2434	1	1959000			36305	4791	18007	18085	42434;42435	42434					0.04269491134380132
VGDIPGVRF	9	Unmodified	_VGDIPGVRF_					0	0	0		ENST00000429775.2_1_X:70182861-70183140:+|nuORF;ENSG00000186468|ENST00000296674|RPS23	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	ENST00000429775.2_1_X:70182861-70183140:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.2706481814384	2	480.269084	958.523616	1.9581	0.00094041	0.38734	0.00018603	2.3454	0.0011264	480.2696334172846	44.65	0.38457	46.61	46.351	46.735	1.9596					24	11	3	0	0	0	0.17276	2	18727	18675;18727		36.127	9.2434	1	1794200			36306	4791	18007	18085	42436;42437	42437					0.04269491134380132
VGDPDMGE	8	Unmodified	_VGDPDMGE_					0	0	0			REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	819.3224975466728	1	819.31891	818.311634	1.2545	0.0010279	3.1167	0.0025535	4.3712	0.0035814	819.3216292604872	102.19	0.16272	102.19	102.07	102.23	0					9	5	2	0	0	0	0.89176	1	42813	42813		0.79363	0	1	12619000	+		36307	10530	18008	18086	42438	42438					-0.10478968338725281
VGDPDMGE	8	Unmodified	_VGDPDMGE_					0	0	0			REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	819.3215820193291	1	819.31891	818.311634	2.7669	0.002267	3.4719	0.0028446	6.2388	0.0051116	819.3194969197295	102.15	0.17085	102.21	102.1	102.27	0.062805					10	5	3	0	0	0	0.89176	1	42778	42778		0.79363	0	1	11453000	+		36308	10530	18008	18086	42439	42439					-0.10478968338725281
VGDPDMGE	8	Unmodified	_VGDPDMGE_					0	0	0			REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	819.31891	818.311634	1.2545	0.0010279	3.1167	0.0025535	4.3712	0.0035814	819.3216292604872	102.19	0.16272	102.19	102.07	102.23	0	-0.011693	-1.2902E-05	NaN	0.79363	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12619000	+		36309	10530	18008	18086							-0.10478968338725281
VGDPDMGE	8	Unmodified	_VGDPDMGE_					0	0	0			REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	REV__ENST00000465222.1_1_3:186501384-186502287:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	819.31891	818.311634	2.7669	0.002267	3.4719	0.0028446	6.2388	0.0051116	819.3194969197295	102.15	0.17085	102.21	102.1	102.27	0.062805	0.011693	0.00027812	NaN	0.79363	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11453000	+		36310	10530	18008	18086							-0.10478968338725281
VGDPPEKRRG	10	Unmodified	_VGDPPEKRRG_					0	0	0		nc|ENSG00000196557|O95180-2|CACNA1H;ENSG00000196557|ENST00000348261|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	nc|ENSG00000196557|O95180-2|CACNA1H	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1013976931572	3	370.871995	1109.59415	-1.3235	-0.00049086	-2.1022	-0.00077966	-3.4258	-0.0012705	370.87123959662057	24.904	0.2756	24.904	24.734	25.01	0					12	8	2	0	0	0	0.1256	1	10391	10391		0.12286	0	1	493050			36311	4947	18009	18087	42440	42440					0.04374164452019613
VGDQWEEE	8	Unmodified	_VGDQWEEE_					0	0	0		ENSG00000189325|ENST00000437635|BNIP5	ENSG00000189325|ENST00000437635|BNIP5	ENSG00000189325|ENST00000437635|BNIP5	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.1385070681572	3	331.138295	990.393055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.785	1	18.087	17.587	18.587	1.3023								0	0	0	1.0178	1	6971	6971		0.45834	0	1				36312	4904	18010	18088	42441	42441					-0.1025256937513177
VGDRKQWI	8	Unmodified	_VGDRKQWI_					0	0	0		ENSG00000156222|ENST00000394573|SLC28A1	ENSG00000156222|ENST00000394573|SLC28A1	ENSG00000156222|ENST00000394573|SLC28A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2233154177666	2	501.279983	1000.54541	2.0073	0.0010062	-1.1489	-0.00057594	0.85834	0.00043027	501.2793245292711	63.13	0.50223	63.13	62.864	63.366	0					43	15	4	0	0	0	0.88958	1	26239	26239		2.8892	0	1	10811000			36313	3440	18011	18089	42442	42442					0.04516295882945087
VGDRSQPERRC	11	Unmodified	_VGDRSQPERRC_					0	0	0			REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8830749392509	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.543	1	20.543	20.043	21.043	0								0	0	0	0.63775	1	8540	8540		0.50596	0.23694	1		+		36314	10540	18012	18090	42443	42443					-0.012882108563189831
VGDRSQPERRC	11	Unmodified	_VGDRSQPERRC_					0	0	0			REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8826476931572	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.811	1	71.811	71.311	72.311	0								0	0	0	0.63775	1	29903	29903		0.50596	0.051438	1		+		36315	10540	18012	18090	42444	42444					-0.012882108563189831
VGDRSQPERRC	11	Unmodified	_VGDRSQPERRC_					0	0	0			REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	REV__ENST00000517621.5_1_11:44941433-44948237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8829528689384	3	434.882565	1301.62587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8104	1	9.8884	9.3884	10.388	0.077971								0	0	0	0.63775	1	4065	4065		0.50596	0	1		+		36316	10540	18012	18090	42445	42445					-0.012882108563189831
VGDSESEG	8	Unmodified	_VGDSESEG_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	779.3068725466728	1	779.305369	778.298092	2.7417	0.0021366	0.19691	0.00015345	2.9386	0.0022901	779.3058322257318	102.3	0.16753	102.37	102.27	102.44	0.062805					8	5	2	0	0	0	0.89176	1	42842	42842		0.79363	0	1	8022300			36317	1949	18013	18091	42446	42446					-0.09992502846307616
VGDTIDLIFN	10	Unmodified	_VGDTIDLIFN_					0	0	0		ENSG00000120337|ENST00000404377|TNFSF18	ENSG00000120337|ENST00000404377|TNFSF18	ENSG00000120337|ENST00000404377|TNFSF18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	553.2914306521416	2	553.790047	1105.56554	2.7465	0.001521	-3.6286	-0.0020095	-0.88209	-0.0004885	553.7896887221727	65.393	0.15422	66.791	66.663	66.817	1.3989					6	4	2	0	0	0	0.12437	1	27427	27427		13.042	3.695	1	1345300			36318	2101	18014	18092	42447	42447					0.01698002032230761
VGDTQVVVF	9	Unmodified	_VGDTQVVVF_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2610961794853	2	482.260925	962.507297	0.97544	0.00047041	0.10738	5.1785E-05	1.0828	0.0005222	482.26064039512	52.705	0.37994	54.101	53.93	54.31	1.3966					19	11	2	0	0	0	0.13873	1	22073	22073		39.957	15.283	1	2480800			36319	3442	18015	18093	42448	42448					0.024543651776298248
VGDTQVVVF	9	Unmodified	_VGDTQVVVF_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	963.5139037966728	1	963.514573	962.507297	0.31753	0.00030595	-0.96609	-0.00093084	-0.64856	-0.0006249	963.5136835635911	52.693	0.31438	54.09	53.93	54.244	1.3966					14	9	2	0	0	0	0.033794	1	22086	22086		81.613	49.308	1	1406800			36320	3442	18015	18093	42449	42449					0.024543651776298248
VGDTQVVVF	9	Unmodified	_VGDTQVVVF_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2630798220634	2	482.260925	962.507297	1.2266	0.00059156	0.65906	0.00031784	1.8857	0.0009094	482.26021246349603	52.187	0.33566	54.16	53.985	54.32	1.9722					13	10	2	0	0	0	0.42305	1	21839	21839		19.257	5.3509	1	1456100			36321	3442	18015	18093	42450	42450					0.024543651776298248
VGDTQVVVF	9	Unmodified	_VGDTQVVVF_					0	0	0		nc|ENSG00000156261|P50990-3|CCT8;nc|ENSG00000156261|P50990-2|CCT8;ENSG00000156261|ENST00000286788|CCT8;ENST00000475205.1_1_21:30434643-30435788:-|nuORF	nc|ENSG00000156261|P50990-3|CCT8	nc|ENSG00000156261|P50990-3|CCT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	963.5156738162041	1	963.514573	962.507297	1.382	0.0013316	-0.22605	-0.0002178	1.1559	0.0011138	963.5145184122688	52.158	0.30415	54.131	53.985	54.289	1.9722					13	9	2	0	0	0	0.066815	1	21863	21863		61.357	31.133	1	859870			36322	3442	18015	18093	42451	42451					0.024543651776298248
VGDVAEIF	8	Unmodified	_VGDVAEIF_					0	0	0			REV__ENST00000306735.9_1_18:77806196-77806295:+|nuORF	REV__ENST00000306735.9_1_18:77806196-77806295:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	425.7526122927666	2	425.221268	848.427984	1.2726	0.00054115	2.4681	0.0010495	3.7407	0.0015906	425.2220062839869	68.964	0.3922	70.817	70.617	71.009	1.853					31	12	3	0	0	0	2.3239	1	28980	28980		2.5775	0	1	3607900	+		36323	12341	18016	18094	42452	42452					-0.0022928177651238
VGDYSCCC	8	Unmodified	_VGDYSCCC_					0	0	0			REV__ENST00000562844.5_1_16:2256163-2257242:+|nuORF	REV__ENST00000562844.5_1_16:2256163-2257242:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	425.8368102908134	2	425.132424	848.250296	0.30671	0.00013039	-1.835	-0.00078011	-1.5283	-0.00064972	425.131648980474	26.72	0.29784	26.72	26.564	26.862	0					20	9	3	0	0	0	2.3239	1	11100	11100		0.79363	0	1	1157400	+		36324	13906	18017	18095	42453	42453					-0.17989939634026086
VGEAVPTAAP	10	Unmodified	_VGEAVPTAAP_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.2439147830009	2	456.245275	910.475997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.245	1	25.497	24.997	25.997	0.25197								0	0	0	0.66052	1	10540	10540		3.5965	0	1				36325	840	18018	18096	42454	42454					0.017177921435177268
VGEAVPTAAP	10	Unmodified	_VGEAVPTAAP_					0	0	0		ENST00000479356.1_1_17:71354047-71433905:-|nuORF;nc|ENSG00000069188|Q58EX2-2|SDK2;nc|ENSG00000069188|Q58EX2-3|SDK2;ENSG00000069188|ENST00000392650|SDK2;nc|ENSG00000069188|Q58EX2-4|SDK2	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	ENST00000479356.1_1_17:71354047-71433905:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.2449523806572	2	456.245275	910.475997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.34	1	25.581	25.081	26.081	1.241								0	0	0	0.66052	1	10179	10179		3.5965	0	1				36326	840	18018	18096	42455	42455					0.017177921435177268
VGEEEWEGG	9	Unmodified	_VGEEEWEGG_					0	0	0		ENST00000164640.8_1_X:153068045-153068288:-|nuORF	ENST00000164640.8_1_X:153068045-153068288:-|nuORF	ENST00000164640.8_1_X:153068045-153068288:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2055847048759	2	496.203804	990.393055	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.299	1	11.043	10.543	11.543	0.74462								0	0	0	0.42693	1	4285	4285		4.756	0.42677	1				36327	5502	18019	18097	42456	42456					-0.10252569375120402
VGEFSGANK	9	Unmodified	_VGEFSGANK_					0	0	0		ENST00000441872.2_1_10:121442641-121442701:-|nuORF;nc|ENSG00000136810|P10599-2|TXN;ENST00000487892.1_1_9:113006439-113007258:-|nuORF;ENST00000510190.1_1_4:77880016-77880280:-|nuORF;ENSG00000136810|ENST00000374517|TXN	ENST00000441872.2_1_10:121442641-121442701:-|nuORF	ENST00000441872.2_1_10:121442641-121442701:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.7273742556572	2	454.727249	907.439946	0.31137	0.00014159	0.52114	0.00023698	0.83251	0.00037856	454.72736778631156	12.168	0.12695	12.956	12.876	13.003	0.78751					5	3	2	0	0	0	0.12216	1	5049	5049		41.956	20.209	1	538850			36328	2736	18020	18098	42457	42457					-0.01747665033337853
VGEFSGANK	9	Unmodified	_VGEFSGANK_					0	0	0		ENST00000441872.2_1_10:121442641-121442701:-|nuORF;nc|ENSG00000136810|P10599-2|TXN;ENST00000487892.1_1_9:113006439-113007258:-|nuORF;ENST00000510190.1_1_4:77880016-77880280:-|nuORF;ENSG00000136810|ENST00000374517|TXN	ENST00000441872.2_1_10:121442641-121442701:-|nuORF	ENST00000441872.2_1_10:121442641-121442701:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	454.727249	907.439946	-0.0046809	-2.1285E-06	0.5997	0.0002727	0.59502	0.00027057	454.72781896667044	12.323	0.15736	13.017	12.917	13.074	0.69396	0.030687	3.0067E-05	NaN	41.956	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	279060			36329	2736	18020	18098							-0.01747665033337853
VGEIKPQGVYD	11	Unmodified	_VGEIKPQGVYD_					0	0	0		nc|ENSG00000111859|Q14511-3|NEDD9;ENSG00000111859|ENST00000379446|NEDD9	nc|ENSG00000111859|Q14511-3|NEDD9	nc|ENSG00000111859|Q14511-3|NEDD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	602.8121826052666	2	602.814053	1203.61355	2.0602	0.0012419	-0.84346	-0.00050845	1.2167	0.00073347	602.8133147036258	40.97	0.35036	40.97	40.731	41.081	0					18	10	2	0	0	0	1.0362	1	17157	17157		1.3295	0.72803	1	1027900			36330	1758	18021	18099	42458	42458					0.019890759522922963
VGELAGTK	8	Unmodified	_VGELAGTK_					0	0	0			REV__GK2|p.G521Vfs*16|1|0.06|ENSG00000196475|chr4:79406641-79406641|T/-|frameshift_variant	REV__GK2|p.G521Vfs*16|1|0.06|ENSG00000196475|chr4:79406641-79406641|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1523010134697	2	387.721436	773.428318	-0.15902	-6.1657E-05	-0.51454	-0.0001995	-0.67356	-0.00026115	387.7212892641145	11.227	0.18854	11.989	11.88	12.068	0.76165					8	5	2	0	0	0	2.3239	1	4672	4672		2.0598	0.21551	1	314080	+		36331	11636	18022	18100	42459	42459					0.032541379433382644
VGELEKVL	8	Unmodified	_VGELEKVL_					0	0	0			REV__USO1|p.L895Hfs*10|1|0.25|ENSG00000138768|chr4:75812257-75812258|-/GCAT|frameshift_variant	REV__USO1|p.L895Hfs*10|1|0.25|ENSG00000138768|chr4:75812257-75812258|-/GCAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	444.2960082888603	2	443.765843	885.517133	3.0828	0.0013681	2.7735	0.0012308	5.8563	0.0025988	443.7671261392153	65.385	0.52942	66.784	66.443	66.973	1.3989					25	16	2	0	0	0	2.3239	1	27333	27333		0.69038	0	1	1055900	+		36332	10080	18023	18101	42460	42460					0.06979553183009557
VGENKFLRSI	10	Unmodified	_VGENKFLRSI_					0	0	0			REV__tr|A0A7D6VQX2|A0A7D6VQX2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00115PE=4SV=1	REV__tr|A0A7D6VQX2|A0A7D6VQX2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	581.8334228396416	2	581.83258	1161.65061	1.932	0.0011241	-0.53226	-0.00030969	1.3997	0.00081439	581.8316503782503	93.281	0.44363	93.281	93.044	93.488	0					16	13	2	0	0	0	0.89803	1	39000	39000		1.4819	0	1	792940	+		36333	15395	18024	18102	42461	42461					0.0762479228869779
VGENKFLRSI	10	Unmodified	_VGENKFLRSI_					0	0	0			REV__tr|A0A7D6VQX2|A0A7D6VQX2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00115PE=4SV=1	REV__tr|A0A7D6VQX2|A0A7D6VQX2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00115PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	581.83258	1161.65061	1.932	0.0011241	-0.53226	-0.00030969	1.3997	0.00081439	581.8316503782503	93.281	0.44363	93.281	93.044	93.488	0	0	0	NaN	1.4819	16	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	792940	+		36334	15395	18024	18102							0.0762479228869779
VGEQEIWSKWW	11	Unmodified	_VGEQEIWSKWW_					0	0	0			REV__nc|ENSG00000276850|P13928-2|ANXA8	REV__nc|ENSG00000276850|P13928-2|ANXA8	MSMS	GG20161007_CRH_Patient100_A02_02	2	724.3544799685478	2	724.353877	1446.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.32	1	102.38	101.88	102.88	0.062805								0	0	0	0.63775	1	42853	42853		1.3295	0.87119	1		+		36335	11993	18025	18103	42462	42462					-0.012278573737376064
VGEQVKILQL	10	Unmodified	_VGEQVKILQL_					0	0	0			REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	REV__nc|ENSG00000130810|Q9NQ55-2|PPAN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3501464724541	2	563.845156	1125.67576	0.98628	0.00055611	2.0976	0.0011827	3.0839	0.0017389	563.844572592231	50.45	0.32756	52.425	52.248	52.575	1.9753					23	10	3	0	0	0	0.059752	1	21116	21116		86.332	9.5071	1	5177800	+		36336	9803	18026	18104	42463	42463					0.11794847091277916
VGERGRFIR	9	Unmodified	_VGERGRFIR_					0	0	0		tr|A0A553STX2|A0A553STX2_NIACIPhotosynthesissystemIIassemblyfactorYcf48/Hcf136-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05795PE=4SV=1	tr|A0A553STX2|A0A553STX2_NIACIPhotosynthesissystemIIassemblyfactorYcf48/Hcf136-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05795PE=4SV=1	tr|A0A553STX2|A0A553STX2_NIACIPhotosynthesissystemIIassemblyfactorYcf48/Hcf136-likedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_05795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3170654177666	2	545.317432	1088.62031	1.3153	0.00071727	-1.6383	-0.00089337	-0.32294	-0.0001761	545.3168478417198	70.153	1.4841	70.153	69.296	70.78	0					88	47	3	0	0	0	0.84963	1	29459	29459		0.6015	0	1	2013200			36337	16668	18027	18105	42464	42464					0.07954478414171717
VGERLPRARP	10	Unmodified	_VGERLPRARP_					0	0	0		GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant;nc|ENSG00000277399|Q6PRD1|GPR179;ENSG00000277399|ENST00000616987|GPR179;GPR179|p.W1960Cfs*10|1|0.96|ENSG00000277399|chr17:38327664-38327689|CGGAATCTGCTGGGGCAGTGGTCTCC/-|frameshift_variant	GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8431884646416	2	575.843813	1149.67307	1.5956	0.00091882	-0.40233	-0.00023168	1.1933	0.00068714	575.8432886943534	72.692	1.924	72.692	71.509	73.433	0					120	60	3	0	0	0	0.89803	1	30474	30474		1.4819	0	1	2170400			36338	5472	18028	18106	42465	42465					0.10422436476960684
VGESKEEK	8	Unmodified	_VGESKEEK_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;CACNA1C|p.S1498Afs*17|1|0.18|ENSG00000151067|chr12:2664940-2664940|A/-|frameshift_variant;CACNA1C|p.I1373Sfs*65|1|0.06|ENSG00000151067|chr12:2651667-2651668|-/G|frameshift_variant;CACNA1C|p.V1586Wfs*9|1|0.1|ENSG00000151067|chr12:2666770-2666770|C/-|frameshift_variant	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	453.2299682497978	2	453.232364	904.450176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.001	1	29.001	28.501	29.501	0								0	0	0	1.0178	1	12139	12139		2.5775	0	1				36339	7578	18029	18107	42466	42466					-0.005871020987569864
VGESKEEK	8	Unmodified	_VGESKEEK_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;CACNA1C|p.S1498Afs*17|1|0.18|ENSG00000151067|chr12:2664940-2664940|A/-|frameshift_variant;CACNA1C|p.I1373Sfs*65|1|0.06|ENSG00000151067|chr12:2651667-2651668|-/G|frameshift_variant;CACNA1C|p.V1586Wfs*9|1|0.1|ENSG00000151067|chr12:2666770-2666770|C/-|frameshift_variant	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	453.2318603396416	2	453.232364	904.450176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.086	1	29.365	28.865	29.865	1.2789								0	0	0	1.0178	1	11771	11771		5.7604	0	1				36340	7578	18029	18107	42467	42467					-0.005871020987569864
VGESLILFE	9	Unmodified	_VGESLILFE_					0	0	0		tr|A0A7D7A1J8|A0A7D7A1J8_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15675PE=4SV=1	tr|A0A7D7A1J8|A0A7D7A1J8_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15675PE=4SV=1	tr|A0A7D7A1J8|A0A7D7A1J8_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15675PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1006.549487292767	1	1006.54554	1005.53826	2.2029	0.0022174	0.33237	0.00033455	2.5353	0.0025519	1006.5460935982712	80.67	0.28048	80.961	80.809	81.089	0.29056					14	8	2	0	0	0	0.12174	1	33718	33718		42.095	0.25493	1	791540			36341	17240	18030	18108	42468	42468					0.03571518491855841
VGESRKFYYI	10	Unmodified	_VGESRKFYYI_					0	0	0		nc|ENSG00000136720|O60243-2|HS6ST1	nc|ENSG00000136720|O60243-2|HS6ST1	nc|ENSG00000136720|O60243-2|HS6ST1	MSMS	GG20161007_CRH_Patient100_A02_02	2	631.3338500857353	2	631.332413	1260.65027	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.56	1	48.891	48.391	49.391	0.33034								0	0	0	0.66237	1	20359	20359		0.45834	0	1				36342	7879	18031	18109	42469	42469					0.03037372568860519
VGESTTTD	8	Unmodified	_VGESTTTD_					0	0	0			REV__ENST00000592222.5_1_19:1115804-1132196:-|nuORF	REV__ENST00000592222.5_1_19:1115804-1132196:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1795226931572	2	405.179798	808.345042	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.439	1	31.722	31.222	32.222	1.2825								0	0	0	1.0178	1	12774	12774		0.79363	0	1		+		36343	8667	18032	18110	42470	42470					-0.06679643295194637
VGEVIVTK	8	Unmodified	_VGEVIVTK_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1;ENST00000420325.1_1_13:38567761-38567950:-|nuORF;ENST00000388967.3_1_3:36809128-36809431:-|nuORF	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.7617980837822	2	422.760561	843.506569	0.28479	0.0001204	1.7983	0.00076025	2.0831	0.00088064	422.76132876044653	16.83	0.15101	18.133	18.052	18.203	1.3023					8	4	2	0	0	0	0.70442	1	6999	6999		29.841	7.1043	1	545430			36344	3074	18033	18111	42471	42471					0.07855570528579392
VGEVIVTK	8	Unmodified	_VGEVIVTK_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1;ENST00000420325.1_1_13:38567761-38567950:-|nuORF;ENST00000388967.3_1_3:36809128-36809431:-|nuORF	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	422.760561	843.506569	0.37202	0.00015727	0.88383	0.00037365	1.2558	0.00053092	422.7607028137124	17.049	0.14349	17.947	17.876	18.02	0.89794	-0.0929	-0.00056444	NaN	29.841	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	294780			36345	3074	18033	18111							0.07855570528579392
VGFADKLRL	9	Unmodified	_VGFADKLRL_					0	0	0		nc|ENSG00000243710|Q96MR6-2|CFAP57;ENSG00000243710|ENST00000372492|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	nc|ENSG00000243710|Q96MR6-2|CFAP57	MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8045226931572	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.172	1	68.172	67.672	68.672	0								0	0	0	0.42693	1	28392	28392		2.3027	0	1				36346	5356	18034	18112	42472	42472					0.08902039576821608
VGFAFVLLTI	10	Unmodified	_VGFAFVLLTI_					0	0	0		tr|A0A553SS03|A0A553SS03_NIACIMMPLfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_02030PE=4SV=1	tr|A0A553SS03|A0A553SS03_NIACIMMPLfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_02030PE=4SV=1	tr|A0A553SS03|A0A553SS03_NIACIMMPLfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_02030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3318359255791	2	540.328611	1078.64267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.748	1	68.071	67.571	68.571	0.32269								0	0	0	0.66008	1	28364	28364		4.3292	0	1				36347	16587	18035	18113	42473	42473					0.1064926503922834
VGFAIVAS	8	Unmodified	_VGFAIVAS_					0	0	0			REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	763.4325439333916	1	763.434867	762.42759	1.8772	0.0014331	-2.8636	-0.0021862	-0.98644	-0.00075309	763.4330916260083	62.236	0.3092	62.566	62.448	62.757	0.32974					15	9	2	0	0	0	0.88958	1	26091	26091		2.8892	0	1	402670	+		36348	15207	18036	18114	42474	42474					0.0368734329426843
VGFAIVAS	8	Unmodified	_VGFAIVAS_					0	0	0			REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	763.434867	762.42759	2.2589	0.0017245	-5.0376	-0.0038458	-2.7786	-0.0021213	763.4308987749606	62.43	0.31159	62.43	62.242	62.554	0	-0.067917	-0.00053025	NaN	2.8892	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	774160	+		36349	15207	18036	18114							0.0368734329426843
VGFAIVAS	8	Unmodified	_VGFAIVAS_					0	0	0			REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	REV__tr|A0A553SSN0|A0A553SSN0_NIACIAraCfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_03280PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	763.434867	762.42759	1.8772	0.0014331	-2.8636	-0.0021862	-0.98644	-0.00075309	763.4330916260083	62.236	0.3092	62.566	62.448	62.757	0.32974	0.067917	0.0011294	NaN	2.8892	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	402670	+		36350	15207	18036	18114							0.0368734329426843
VGFARPAR	8	Unmodified	_VGFARPAR_					0	0	0			REV__ENST00000466133.1_1_3:159819443-159820214:+|nuORF	REV__ENST00000466133.1_1_3:159819443-159820214:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2570678591728	2	437.256311	872.49807	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.677	1	32.971	32.471	33.471	0.29431								0	0	0	1.0178	1	13716	13716		4.756	1.1595	1		+		36351	13236	18037	18115	42475	42475					0.056720614025948635
VGFCPEGP	8	Unmodified	_VGFCPEGP_					0	0	0		ENST00000484112.5_1_7:99037182-99048419:+|nuORF;ENSG00000187959|ENST00000344935|CPSF4L;ENST00000471455.1_1_7:99042440-99051625:+|nuORF;nc|ENSG00000160917|O95639-3|CPSF4;nc|ENSG00000160917|O95639-2|CPSF4;ENSG00000160917|ENST00000292476|CPSF4	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	403.1812011599541	2	403.181089	804.347625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.557	1	34.557	34.057	35.057	0								0	0	0	1.0178	1	14485	14485		0.79363	0	1				36352	3581	18038	18116	42476	42476					-0.062374663712148504
VGFCPEGP	8	Unmodified	_VGFCPEGP_					0	0	0		ENST00000484112.5_1_7:99037182-99048419:+|nuORF;ENSG00000187959|ENST00000344935|CPSF4L;ENST00000471455.1_1_7:99042440-99051625:+|nuORF;nc|ENSG00000160917|O95639-3|CPSF4;nc|ENSG00000160917|O95639-2|CPSF4;ENSG00000160917|ENST00000292476|CPSF4	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	403.1804992556572	2	403.181089	804.347625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.676	1	34.676	34.176	35.176	0								0	0	0	1.0178	1	14535	14535		0.79363	0	1				36353	3581	18038	18116	42477	42477					-0.062374663712148504
VGFCPEGP	8	Unmodified	_VGFCPEGP_					0	0	0		ENST00000484112.5_1_7:99037182-99048419:+|nuORF;ENSG00000187959|ENST00000344935|CPSF4L;ENST00000471455.1_1_7:99042440-99051625:+|nuORF;nc|ENSG00000160917|O95639-3|CPSF4;nc|ENSG00000160917|O95639-2|CPSF4;ENSG00000160917|ENST00000292476|CPSF4	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	ENST00000484112.5_1_7:99037182-99048419:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	403.1805602908134	2	403.181089	804.347625	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.934	1	34.934	34.434	35.434	0								0	0	0	1.0178	1	14642	14642		0.79363	0	1				36354	3581	18038	18116	42478	42478					-0.062374663712148504
VGFDREGEQL	10	Unmodified	_VGFDREGEQL_					0	0	0			REV__ENST00000492931.5_1_20:43251503-43280248:-|nuORF	REV__ENST00000492931.5_1_20:43251503-43280248:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.2821533083916	2	575.280377	1148.5462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.871	1	59.196	58.696	59.696	0.32553								0	0	0	0.66176	1	24670	24670		1.4819	0.68827	1		+		36355	11649	18039	18117	42479	42479					-0.022129542586753814
VGFDWSDR	8	Unmodified	_VGFDWSDR_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MSMS	GG20161007_CRH_Patient100_A02_01	1	491.2253906130791	2	491.224874	980.435195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.483	1	51.483	50.983	51.983	0								0	0	0	1.0178	1	21472	21472		2.5775	0	1				36356	4478	18040	18118	42480	42480					-0.055805491761020676
VGFDWSDR	8	Unmodified	_VGFDWSDR_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MSMS	GG20161007_CRH_Patient100_A02_02	2	491.2250854372978	2	491.224874	980.435195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.09	1	51.418	50.918	51.918	0.32824								0	0	0	1.0178	1	21403	21403		2.5775	0	1				36357	4478	18040	18118	42481	42481					-0.055805491761020676
VGFEVNVYN	9	Unmodified	_VGFEVNVYN_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7579223513603	2	520.756007	1039.49746	2.7366	0.0014251	0.88772	0.00046229	3.6244	0.0018874	520.756242448538	80.494	0.36771	81.745	81.544	81.912	1.2512					42	11	5	0	0	0	0.7849	1	33764	33764		3.9444	0	1	4902600	+		36358	9870	18041	18119	42482	42482					-0.020708228277499074
VGFEVNVYN	9	Unmodified	_VGFEVNVYN_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	520.756007	1039.49746	2.2653	0.0011797	-0.8467	-0.00044092	1.4186	0.00073875	520.7554393397453	81.541	0.50581	81.541	81.288	81.794	0	-0.18165	-0.0010135	NaN	3.9444	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19992000	+		36359	9870	18041	18119							-0.020708228277499074
VGFEVNVYN	9	Unmodified	_VGFEVNVYN_					0	0	0			REV__ENSG00000133124|ENST00000372129|IRS4	REV__ENSG00000133124|ENST00000372129|IRS4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	520.756007	1039.49746	2.7366	0.0014251	0.88772	0.00046229	3.6244	0.0018874	520.756242448538	80.494	0.36771	81.745	81.544	81.912	1.2512	0.02239	0.00079297	NaN	3.9444	42	11	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4902600	+		36360	9870	18041	18119							-0.020708228277499074
VGFFPFLLLF	10	Unmodified	_VGFFPFLLLF_					0	0	0		ENST00000233813.4_1_2:217560055-217560226:-|nuORF	ENST00000233813.4_1_2:217560055-217560226:-|nuORF	ENST00000233813.4_1_2:217560055-217560226:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	400.0446349978447	3	400.566961	1198.67905	0.49777	0.00019939	-3.6381	-0.0014573	-3.1403	-0.0012579	400.56604243686644	25.554	0.79657	27.27	26.936	27.732	1.7167					31	25	2	0	0	0	0.12559	1	10606	10606		0.77653	0.31819	1	869250			36361	5555	18042	18120	42483	42483					0.08766141935939231
VGFFPFLLLF	10	Unmodified	_VGFFPFLLLF_					0	0	0		ENST00000233813.4_1_2:217560055-217560226:-|nuORF	ENST00000233813.4_1_2:217560055-217560226:-|nuORF	ENST00000233813.4_1_2:217560055-217560226:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	400.566961	1198.67905	0.79563	0.0003187	-2.8013	-0.0011221	-2.0057	-0.0008034	400.56561861317124	26.039	0.99473	27.299	26.925	27.92	1.2594	0.014275	0.00045298	NaN	0.77653	47	31	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	832830			36362	5555	18042	18120							0.08766141935939231
VGFGLLFV	8	Unmodified	_VGFGLLFV_					0	0	0			REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	851.5014526247978	1	851.502552	850.495276	3.0702	0.0026143	-4.3569	-0.0037099	-1.2867	-0.0010956	851.4991254243647	106.91	0.11021	107.07	107.02	107.13	0.16174					7	4	2	0	0	0	0.89176	1	45828	45828		0.79363	0	1	12512000	+		36363	10877	18043	18121	42484	42484					0.0640479322507872
VGFKLRLCSLS	11	Unmodified	_VGFKLRLCSLS_					0	0	0			REV__AZIN2|p.S168R|1|0.05|ENSG00000142920|chr1:33093333-33093333|C/A|missense_variant	REV__AZIN2|p.S168R|1|0.05|ENSG00000142920|chr1:33093333-33093333|C/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	306.0391723513603	4	306.429867	1221.69036	-3.3512	-0.0010269	2.7593	0.00084555	-0.59188	-0.00018137	306.43078857991486	16.261	0.2221	16.261	16.15	16.373	0					10	6	2	0	0	0	0.14606	1	6723	6723		0.45452	0.1855	1	626380	+		36364	8156	18044	18122	42485	42485					0.08838595967768015
VGFKLRLCSLS	11	Unmodified	_VGFKLRLCSLS_					0	0	0			REV__AZIN2|p.S168R|1|0.05|ENSG00000142920|chr1:33093333-33093333|C/A|missense_variant	REV__AZIN2|p.S168R|1|0.05|ENSG00000142920|chr1:33093333-33093333|C/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	306.429867	1221.69036	-1.058	-0.00032421	-0.30287	-9.2807E-05	-1.3609	-0.00041701	306.6804133644631	15.408	0.15494	16.235	16.107	16.262	0.82643	-0.013062	-0.0031485	NaN	0.45452	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	85686	+		36365	8156	18044	18122							0.08838595967768015
VGFLLSRISKR	11	Unmodified	_VGFLLSRISKR_					0	0	0			REV__nc|ENSG00000158023|Q8TBY9-2|CFAP251	REV__nc|ENSG00000158023|Q8TBY9-2|CFAP251	MSMS	GG20161007_CRH_Patient100_A02_01	1	638.3995849490166	2	638.398422	1274.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.872	1	46.872	46.372	47.372	0								0	0	0	0.63775	1	19589	19589		1.3295	0	1		+		36366	10546	18045	18123	42486	42486					0.15589022376434514
VGFLLSRISKR	11	Unmodified	_VGFLLSRISKR_					0	0	0			REV__nc|ENSG00000158023|Q8TBY9-2|CFAP251	REV__nc|ENSG00000158023|Q8TBY9-2|CFAP251	MSMS	GG20161007_CRH_Patient100_W632_02	4	638.3966552615166	2	638.398422	1274.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.353	1	47.313	46.813	47.813	1.9596								0	0	0	0.63775	1	19004	19004		0.35063	0	1		+		36367	10546	18045	18123	42487	42487					0.15589022376434514
VGFLRFLFL	9	Unmodified	_VGFLRFLFL_					0	0	0		NOL6|p.W912Lfs*20|1|0.05|ENSG00000165271|chr9:33464924-33464925|-/TCTTTAAATGGGTGACCTGGGGGAG|frameshift_variant;nc|ENSG00000165271|Q9H6R4-2|NOL6;nc|ENSG00000165271|Q9H6R4-4|NOL6;ENSG00000165271|ENST00000297990|NOL6	NOL6|p.W912Lfs*20|1|0.05|ENSG00000165271|chr9:33464924-33464925|-/TCTTTAAATGGGTGACCTGGGGGAG|frameshift_variant	NOL6|p.W912Lfs*20|1|0.05|ENSG00000165271|chr9:33464924-33464925|-/TCTTTAAATGGGTGACCTGGGGGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3353759646416	2	556.33677	1110.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.934	1	99.131	98.631	99.631	0.19767								0	0	0	0.42693	1	41652	41652		5.2307	2.3415	1				36368	3825	18046	18124	42488	42488					0.1080839099597597
VGFQKILTLT	10	Unmodified	_VGFQKILTLT_					0	0	0		ENST00000528744.5_1_11:126137442-126138699:-|nuORF;nc|ENSG00000182934|P08240-2|SRPRA;ENSG00000182934|ENST00000332118|SRPRA	ENST00000528744.5_1_11:126137442-126138699:-|nuORF	ENST00000528744.5_1_11:126137442-126138699:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3435546755791	2	560.342249	1118.66995	4.6478	0.0026044	-2.1283	-0.0011926	2.5196	0.0014118	560.3408691028393	87.254	0.55872	88.749	88.456	89.015	1.4953					60	17	5	0	0	0	0.89803	1	36857	36857		1.6526	0.17072	1	27629000			36369	4633	18047	18125	42489	42489					0.11535748579603933
VGFVILILLR	10	Unmodified	_VGFVILILLR_					0	0	0		tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.8903076052666	2	571.886627	1141.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.831	1	13.831	13.331	14.331	0								0	0	0	0.66166	1	5734	5734		1.6526	1.1279	1				36370	16227	18048	18126	42490	42490					0.193492086099468
VGFVILILLR	10	Unmodified	_VGFVILILLR_					0	0	0		tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	tr|A0A553SJ16|A0A553SJ16_NIACIPhosphatidylglycerol--prolipoproteindiacylglyceryltransferaseOS=NialliacirculansOX=1397GN=lgtPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.8882934451103	2	571.886627	1141.7587	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.047	1	14.047	13.547	14.547	0								0	0	0	0.66166	1	5826	5826		1.6526	1.1279	1				36371	16227	18048	18126	42491	42491					0.193492086099468
VGFYYTNQLTP	11	Unmodified	_VGFYYTNQLTP_					0	0	0			REV__ENST00000369293.5_1_6:96025451-96034301:+|nuORF	REV__ENST00000369293.5_1_6:96025451-96034301:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8821288943291	3	434.883677	1301.6292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.375	1	11.026	10.526	11.526	0.65058								0	0	0	0.63775	1	4316	4316		0.50596	0.051438	1		+		36372	12646	18049	18127	42492	42492					-0.009546375306854316
VGGAFTIAQIL	11	Unmodified	_VGGAFTIAQIL_					0	0	0			REV__tr|A0A7D6VYK3|A0A7D6VYK3_9CLOTAscorbate-specificPTSsystemEIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_11250PE=3SV=1	REV__tr|A0A7D6VYK3|A0A7D6VYK3_9CLOTAscorbate-specificPTSsystemEIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_11250PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3205444216728	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.049	1	71.049	70.549	71.549	0								0	0	0	0.63775	1	29591	29591		3.2813	0.97858	1		+		36373	15561	18050	18128	42493	42493					0.08222889028479585
VGGARPLLW	9	Unmodified	_VGGARPLLW_					0	0	0			REV__nc|ENSG00000279245|Q8IWN6|FAM223A	REV__nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7882568240166	2	484.787444	967.560336	1.6616	0.00080551	1.1125	0.00053935	2.7741	0.0013449	484.7878952194563	25.867	0.36483	26.119	25.921	26.285	0.25197					32	11	4	0	0	0	0.82604	1	10769	10769		2.3027	0.24298	1	10155000	+		36374	14562	18051	18129	42494	42494					0.07525787750932977
VGGAVKSR	8	Unmodified	_VGGAVKSR_					0	0	0			REV__ENST00000358220.5_1_10:1095483-1118068:+|nuORF	REV__ENST00000358220.5_1_10:1095483-1118068:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	387.2323181033134	2	387.235045	772.455536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.2	1	105.2	104.7	105.7	0								0	0	0	1.0178	1	44595	44595		0.79363	0	1		+		36375	12569	18052	18130	42495	42495					0.060206662743780726
VGGCAGCG	8	Unmodified	_VGGCAGCG_					0	0	0			REV__EMILIN1|p.D579E|1|0.18|ENSG00000138080|chr2:27083308-27083308|T/A|missense_variant	REV__EMILIN1|p.D579E|1|0.18|ENSG00000138080|chr2:27083308-27083308|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	624.2287475466728	1	623.227593	622.220316	0.80018	0.0004987	-0.5692	-0.00035474	0.23099	0.00014396	623.2261509977451	12.39	0.98804	12.39	11.972	12.96	0					97	31	5	0	0	0	0.89176	2	5132	5132;5181		0.79363	0.79363	1	3435600	+		36376	8474	18053	18131	42496;42497	42496					-0.10590510517045004
VGGDLVNFI	9	Unmodified	_VGGDLVNFI_					0	0	0			REV__nc|ENSG00000072201|Q8TBB1-2|LNX1	REV__nc|ENSG00000072201|Q8TBB1-2|LNX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	933.5057861208916	1	933.504009	932.496732	3.4595	0.0032295	0.49629	0.00046329	3.9558	0.0036928	933.5047869965746	74.759	0.33862	76.065	75.876	76.214	1.3063					24	10	3	0	0	0	0.059546	1	31402	31402		64.236	0	1	2489900	+		36377	8734	18054	18132	42498	42498					0.027783825231722403
VGGEEFCILL	10	Unmodified	_VGGEEFCILL_					0	0	0		tr|A0A7D6VPD1|A0A7D6VPD1_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16265PE=4SV=1	tr|A0A7D6VPD1|A0A7D6VPD1_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16265PE=4SV=1	tr|A0A7D6VPD1|A0A7D6VPD1_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16265PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2783080935478	2	540.275718	1078.53688	4.7275	0.0025541	1.5737	0.00085022	6.3011	0.0034044	540.2768585439586	90.103	0.38128	91.123	90.958	91.34	1.0199					27	11	3	0	0	0	0.62746	1	37964	37964		21.747	1.293	1	1310600			36378	16762	18055	18133	42499	42499					0.0007556113146165444
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1801330447197	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.303	1	7.303	6.803	7.803	0								0	0	0	1.0178	1	3003	3003		0.79363	0	1				36379	7041	18056	18134	42500	42500					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1798583865166	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.509	1	7.509	7.009	8.009	0								0	0	0	1.0178	1	3087	3087		0.79363	0	1				36380	7041	18056	18134	42501	42501					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1797363162041	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6247	1	7.6247	7.1247	8.1247	0								0	0	0	1.0178	1	3134	3134		0.79363	0	1				36381	7041	18056	18134	42502	42502					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797668337822	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.962	1	12.656	12.156	13.156	0.69396								0	0	0	1.0178	1	4970	4970		0.79363	0	1				36382	7041	18056	18134	42503	42503					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1798278689384	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.084	1	12.778	12.278	13.278	0.69396								0	0	0	1.0178	1	5021	5021		0.79363	0	1				36383	7041	18056	18134	42504	42504					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1799499392509	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.178	1	12.872	12.372	13.372	0.69396								0	0	0	1.0178	1	5059	5059		0.79363	0	1				36384	7041	18056	18134	42505	42505					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797973513603	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.275	1	12.969	12.469	13.469	0.69396								0	0	0	1.0178	1	5099	5099		0.79363	0	1				36385	7041	18056	18134	42506	42506					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1797363162041	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.436	1	13.13	12.63	13.63	0.69396								0	0	0	1.0178	1	5165	5165		0.79363	0	1				36386	7041	18056	18134	42507	42507					-0.06336803855458584
VGGEQEQG	8	Unmodified	_VGGEQEQG_					0	0	0		ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	ENST00000512407.5_1_4:108984787-108993278:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1798278689384	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.551	1	13.245	12.745	13.745	0.69396								0	0	0	1.0178	1	5212	5212		0.79363	0	1				36387	7041	18056	18134	42508	42508					-0.06336803855458584
VGGFKKKFL	9	Unmodified	_VGGFKKKFL_					0	0	0			REV__ENST00000465893.1_1_6:41037763-41039373:-|nuORF	REV__ENST00000465893.1_1_6:41037763-41039373:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.8824645876884	3	341.883172	1022.62769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.15991	1	0.15991	-0.34009	0.65991	0								0	0	0	0.42693	1	65	65		0.26902	0	1		+		36388	9651	18057	18135	42509	42509					0.11727817961900655
VGGFKKKFL	9	Unmodified	_VGGFKKKFL_					0	0	0			REV__ENST00000465893.1_1_6:41037763-41039373:-|nuORF	REV__ENST00000465893.1_1_6:41037763-41039373:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.8826476931572	3	341.883172	1022.62769	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.27578	1	0.27578	-0.22422	0.77578	0								0	0	0	0.42693	1	112	112		0.26902	0	1		+		36389	9651	18057	18135	42510	42510					0.11727817961900655
VGGFRYSERY	10	Unmodified	_VGGFRYSERY_					0	0	0		ENSG00000113282|ENST00000411809|CLINT1;nc|ENSG00000113282|Q14677-2|CLINT1;nc|ENSG00000113282|Q14677-3|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	ENSG00000113282|ENST00000411809|CLINT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.3021728396416	2	617.304187	1232.59382	-0.087798	-5.4198E-05	-2.7277	-0.0016838	-2.8155	-0.001738	617.3022368934006	13.385	0.12342	14.213	14.138	14.261	0.82789					7	3	3	0	0	0	0.6819	1	5559	5559		19.257	3.1079	1	619060			36390	1815	18058	18136	42511	42511					-0.013172552678042848
VGGFYVRRRR	10	Unmodified	_VGGFYVRRRR_					0	0	0			REV__ENST00000373178.4_1_1:36559103-36559385:+|nuORF	REV__ENST00000373178.4_1_1:36559103-36559385:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3720580935478	2	633.37053	1264.72651	1.7557	0.001112	-1.3114	-0.00083063	0.44424	0.00028137	633.3694671456946	80.035	0.81465	80.335	80.004	80.819	0.30047					43	25	3	0	0	0	0.89803	1	33508	33508		0.45834	0	1	694730	+		36391	12692	18059	18137	42512	42512					0.10473233979496399
VGGGFISP	8	Unmodified	_VGGGFISP_					0	0	0		ENST00000525460.5_1_1:108115955-108220600:-|nuORF	ENST00000525460.5_1_1:108115955-108220600:-|nuORF	ENST00000525460.5_1_1:108115955-108220600:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	733.3911010622978	1	733.387916	732.38064	2.7159	0.0019918	1.5186	0.0011137	4.2345	0.0031055	733.3888833318125	104.77	0.11033	104.82	104.76	104.87	0.056801					15	5	4	0	0	0	0.89178	1	44269	44269		0.69038	0	1	121880000			36392	7117	18060	18138	42513	42513					0.0037448374314408284
VGGGPHAG	8	Unmodified	_VGGGPHAG_					0	0	0			REV__ENSG00000119943|ENST00000370575|PYROXD2	REV__ENSG00000119943|ENST00000370575|PYROXD2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	651.6540405154228	1	651.320899	650.313623	2.1163	0.0013784	0.13482	8.7809E-05	2.2511	0.0014662	651.3229087234125	73.25	0.60371	73.575	73.212	73.816	0.32494					33	19	2	0	0	0	2.3239	1	30701	30701		2.8892	0	1	868960	+		36393	9561	18061	18139	42514	42514					-0.02552126747946204
VGGGRGRA	8	Unmodified	_VGGGRGRA_					0	0	0		ENST00000518067.5_1_8:25309042-25315859:-|nuORF;ENST00000221200.8_1_8:25303740-25315859:-|nuORF	ENST00000518067.5_1_8:25309042-25315859:-|nuORF	ENST00000518067.5_1_8:25309042-25315859:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.2080566287041	2	365.209361	728.404169	-1.3045	-0.00047642	-2.015	-0.00073589	-3.3195	-0.0012123	365.2085584801005	108.02	0.15771	108.02	107.93	108.09	0					17	7	3	0	0	0	0.89198	1	46451	46451		0	0	1	43738000			36394	5530	18062	18140	42515	42515					0.02910342300310731
VGGIWWFF	8	Unmodified	_VGGIWWFF_					0	0	0		ENST00000487395.1_1_6:102376237-102441071:+|nuORF;nc|ENSG00000164418|Q13002-4|GRIK2;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000171189|P39086-2|GRIK1;ENSG00000164418|ENST00000369134|GRIK2;nc|ENSG00000171189|P39086|GRIK1;ENSG00000171189|ENST00000327783|GRIK1	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	338.2171813845634	3	337.841084	1010.50142	-1.1477	-0.00038774	-0.75133	-0.00025383	-1.899	-0.00064157	337.842143276191	90.828	0.15819	90.828	90.746	90.905	0					5	4	2	0	0	0	2.3239	1	37990	37990		0.45834	0	1	388280			36395	3777	18063	18141	42516	42516					-0.003406885433946627
VGGIWWFF	8	Unmodified	_VGGIWWFF_					0	0	0		ENST00000487395.1_1_6:102376237-102441071:+|nuORF;nc|ENSG00000164418|Q13002-4|GRIK2;nc|ENSG00000164418|Q13002-2|GRIK2;nc|ENSG00000164418|Q13002-5|GRIK2;nc|ENSG00000171189|P39086-2|GRIK1;ENSG00000164418|ENST00000369134|GRIK2;nc|ENSG00000171189|P39086|GRIK1;ENSG00000171189|ENST00000327783|GRIK1	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	ENST00000487395.1_1_6:102376237-102441071:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	337.841084	1010.50142	4.1756	0.0014107	-7.3619	-0.0024872	-3.1863	-0.0010765	338.1717022726406	89.093	0.28493	90.497	90.36	90.645	1.4045	-0.16526	-0.0021774	NaN	0.45834	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	351840			36396	3777	18063	18141							-0.003406885433946627
VGGKLTDIHGN	11	Unmodified	_VGGKLTDIHGN_					0	0	0		nc|ENSG00000162813|O95861-3|BPNT1;nc|ENSG00000162813|O95861-4|BPNT1;ENSG00000162813|ENST00000322067|BPNT1;nc|ENSG00000162813|O95861-2|BPNT1	nc|ENSG00000162813|O95861-3|BPNT1	nc|ENSG00000162813|O95861-3|BPNT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	555.7998535037041	2	555.798737	1109.58292	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.678	1	60.003	59.503	60.503	0.32553								0	0	0	0.63775	1	25007	25007		1.1933	0.39971	1				36397	3649	18064	18142	42517	42517					0.03251342357907561
VGGKSYLN	8	Unmodified	_VGGKSYLN_					0	0	0		tr|A0A553SIF9|A0A553SIF9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_14785PE=4SV=1	tr|A0A553SIF9|A0A553SIF9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_14785PE=4SV=1	tr|A0A553SIF9|A0A553SIF9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_14785PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.2285034060478	2	419.226885	836.439217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.048	1	98.139	97.639	98.639	0.090881								0	0	0	1.0178	1	41026	41026		2.5775	0	1				36398	16196	18065	18143	42518	42518					0.014455403176043546
VGGKYKLVRK	10	Unmodified	_VGGKYKLVRK_					0	0	0		CSNK1A1-PDE6A|1|fusion;nc|ENSG00000113712|P48729-3|CSNK1A1;ENSG00000113712|ENST00000377843|CSNK1A1;nc|ENSG00000113712|P48729-2|CSNK1A1;CSNK1A1L|p.M241Ifs*10|1|0.05|ENSG00000180138|chr13:37104534-37104535|-/TAATATATCCCTT|frameshift_variant;ENSG00000180138|ENST00000379800|CSNK1A1L	CSNK1A1-PDE6A|1|fusion	CSNK1A1-PDE6A|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3681518435478	2	574.369133	1146.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.837	1	96.026	95.526	96.526	1.1887								0	0	0	0.66237	1	39899	39899		0.45834	0	1				36399	380	18066	18144	42519	42519					0.15621965801983606
VGGLGLAM	8	Unmodified	_VGGLGLAM_					0	0	0		nc|ENSG00000120251|P42262-2|GRIA2;ENSG00000120251|ENST00000264426|GRIA2;nc|ENSG00000120251|P42262-3|GRIA2;nc|ENSG00000120251|P42262-4|GRIA2;ENSG00000152578|ENST00000282499|GRIA4;nc|ENSG00000125675|P42263|GRIA3;ENSG00000125675|ENST00000620443|GRIA3	nc|ENSG00000120251|P42262-2|GRIA2;nc|ENSG00000125675|P42263|GRIA3	nc|ENSG00000120251|P42262-2|GRIA2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	359.2003051638603	2	359.201825	716.389096	-1.4769	-0.0005305	-1.6136	-0.0005796	-3.0904	-0.0011101	359.20133197611784	99.395	0.12121	99.395	99.319	99.44	0					5	3	2	0	0	0	2.3239	1	41613	41613		0.79363	0	1	2451100			36400	2098;2269	18067	18145	42520	42520					0.019557143881002048
VGGLKNTLVHR	11	Unmodified	_VGGLKNTLVHR_					0	0	0		nc|ENSG00000240891|Q0VAA5-2|PLCXD2;ENSG00000240891|ENST00000636933|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	nc|ENSG00000240891|Q0VAA5-2|PLCXD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.3589965701103	2	597.359296	1192.70404	2.4539	0.0014659	-1.5691	-0.00093733	0.88479	0.00052854	597.3584163002173	85.087	0.56197	85.339	85.133	85.695	0.25227					26	17	2	0	0	0	1.0357	1	35589	35589		1.4819	1.0236	1	1159800			36401	5336	18068	18146	42521	42521					0.115395897911867
VGGLPSAKRF	10	Unmodified	_VGGLPSAKRF_					0	0	0		ENST00000589123.5_2_19:3464049-3464370:+|nuORF	ENST00000589123.5_2_19:3464049-3464370:+|nuORF	ENST00000589123.5_2_19:3464049-3464370:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	344.2270080447197	3	344.538064	1030.59236	0.020306	6.9962E-06	-1.8541	-0.00063881	-1.8338	-0.00063182	344.5375545802481	25.761	0.34027	27.021	26.832	27.172	1.2594					16	10	2	0	0	0	0.12559	1	10726	10726		0.15932	0	1	881810			36402	7470	18069	18147	42522	42522					0.07829155434069435
VGGLSVLY	8	Unmodified	_VGGLSVLY_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF;ENST00000558501.5_1_19:8275630-8321979:+|nuORF;ENSG00000090661|ENST00000251363|CERS4	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2338439822197	2	404.234179	806.453805	2.2906	0.00092594	-2.8387	-0.0011475	-0.54812	-0.00022157	404.23274227254456	64.291	0.90793	66.219	65.643	66.551	1.928					54	28	4	0	0	0	0.88958	1	27015	27015		2.8892	0	1	8697700			36403	7311	18070	18148	42523	42523					0.042836124657469554
VGGPKALI	8	Unmodified	_VGGPKALI_					0	0	0		tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7458373904228	2	377.744714	753.474875	0.93717	0.00035401	0.83781	0.00031648	1.775	0.00067049	377.74595472931	67.145	0.73386	69.034	68.616	69.35	1.8889					50	23	4	0	0	0	0.88958	1	28215	28215		2.8892	0	1	5654900			36404	16904	18071	18149	42524	42524					0.08827622565274851
VGGPKALI	8	Unmodified	_VGGPKALI_					0	0	0		tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	377.744714	753.474875	-0.57266	-0.00021632	5.5032	0.0020788	4.9306	0.0018625	377.7465686671479	69.197	0.93835	69.197	68.799	69.738	0	-0.046229	0.00086439	NaN	2.8892	65	29	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5156400			36405	16904	18071	18149							0.08827622565274851
VGGPKALI	8	Unmodified	_VGGPKALI_					0	0	0		tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	377.744714	753.474875	1.3057	0.00049321	4.2396	0.0016015	5.5452	0.0020947	377.7460563203855	69.174	0.90948	69.496	69.157	70.066	0.32224	0.2528	-9.0291E-05	NaN	2.8892	72	28	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4660300			36406	16904	18071	18149							0.08827622565274851
VGGPKALI	8	Unmodified	_VGGPKALI_					0	0	0		tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	tr|A0A7D6VT78|A0A7D6VT78_9CLOT4Fe-4SbindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01775PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	377.744714	753.474875	1.1465	0.00043309	3.7853	0.0014299	4.9319	0.001863	377.7460708013644	67.868	0.79187	69.246	68.914	69.706	1.3778	0.0023866	-0.00043344	NaN	2.8892	61	25	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4809000			36407	16904	18071	18149							0.08827622565274851
VGGPKLVRYY	10	Unmodified	_VGGPKLVRYY_					0	0	0			REV__tr|A0A553SSX3|A0A553SSX3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03960PE=4SV=1	REV__tr|A0A553SSX3|A0A553SSX3_NIACIClassISAM-dependentmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03960PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	576.3352538943291	2	576.332216	1150.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.246	1	45.572	45.072	46.072	0.32674								0	0	0	0.66155	1	18998	18998		1.8442	0	1		+		36408	15219	18072	18150	42525	42525					0.08057997639662062
VGGPLQIA	8	Unmodified	_VGGPLQIA_					0	0	0			REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	754.4457885622978	1	754.445766	753.438489	2.0606	0.0015546	-2.967	-0.0022385	-0.90647	-0.00068388	754.4425903399376	64.274	0.60041	64.274	63.862	64.462	0					24	18	2	0	0	0	0.88958	1	26863	26863		2.8892	0	1	1006100	+		36409	12073	18073	18151	42526	42526					0.05190745668562613
VGGPLQIA	8	Unmodified	_VGGPLQIA_					0	0	0			REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	754.445766	753.438489	2.0606	0.0015546	-2.967	-0.0022385	-0.90647	-0.00068388	754.4425903399376	64.274	0.60041	64.274	63.862	64.462	0	-0.18764	-0.00045832	NaN	2.8892	24	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1006100	+		36410	12073	18073	18151							0.05190745668562613
VGGPLQIA	8	Unmodified	_VGGPLQIA_					0	0	0			REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	754.445766	753.438489	1.8833	0.0014208	-2.0454	-0.0015431	-0.16211	-0.0001223	754.443782634839	64.121	0.56931	64.45	64.056	64.626	0.32899	-0.011509	0.00023702	NaN	2.8892	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1029700	+		36411	12073	18073	18151							0.05190745668562613
VGGPLQIA	8	Unmodified	_VGGPLQIA_					0	0	0			REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	754.445766	753.438489	2.2621	0.0017066	-1.7809	-0.0013436	0.4812	0.00036304	754.4443839393383	63.128	0.78976	64.542	63.869	64.659	1.4134	0.079892	0.00043656	NaN	2.8892	30	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	968420	+		36412	12073	18073	18151							0.05190745668562613
VGGPLQIA	8	Unmodified	_VGGPLQIA_					0	0	0			REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	REV__ENST00000216923.4_1_20:50808259-50808472:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	754.445766	753.438489	2.224	0.0016779	-2.7497	-0.0020745	-0.52578	-0.00039668	754.4436121412382	62.637	0.6751	64.581	64.107	64.782	1.9444	0.11926	-0.00029439	NaN	2.8892	28	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1203600	+		36413	12073	18073	18151							0.05190745668562613
VGGPRRLSRLG	11	Unmodified	_VGGPRRLSRLG_					0	0	0			REV__ENST00000379287.3_1_6:13487318-13487489:-|nuORF	REV__ENST00000379287.3_1_6:13487318-13487489:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3585693240166	2	584.357088	1166.69962	1.8497	0.0010809	-0.65371	-0.000382	1.196	0.00069888	584.356730904312	72.52	1.5212	72.845	71.85	73.371	0.32494					73	47	2	0	0	0	1.0362	1	30438	30438		1.3295	0	1	3000400	+		36414	12746	18074	18152	42527	42527					0.12294125368293862
VGGPTVRKPDQ	11	Unmodified	_VGGPTVRKPDQ_					0	0	0			REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3238403201103	2	577.319837	1152.62512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.96	1	112.96	112.46	113.46	0								0	0	0	0.63775	1	48817	48817		3.2813	0.54611	1		+		36415	13423	18075	18153	42528	42528					0.054913177662683665
VGGPTVRKPDQ	11	Unmodified	_VGGPTVRKPDQ_					0	0	0			REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	REV__ENST00000490470.5_1_3:133407133-133426371:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3198730349541	2	577.319837	1152.62512	0.52958	0.00030574	0.77407	0.00044689	1.3036	0.00075262	577.3202708561241	23.02	1.583	24.671	24.259	25.842	1.6511					115	51	5	0	0	0	1.0131	1	9867	9867		2.9952	0.26005	1	21732000	+		36416	13423	18075	18153	42529	42529					0.054913177662683665
VGGREKSSSAA	11	Unmodified	_VGGREKSSSAA_					0	0	0			REV__ENSG00000124610|ENST00000244573|H1-1	REV__ENSG00000124610|ENST00000244573|H1-1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.2283203005791	2	524.772719	1047.53089	1.4185	0.00074442	-3.3821	-0.0017748	-1.9636	-0.0010304	524.7716515469212	23.999	0.2499	25.24	25.082	25.331	1.241					14	7	3	0	0	0	0.14606	1	9974	9974		3.2813	0.97858	1	600320	+		36417	9652	18076	18154	42530	42530					0.009021789441476358
VGGREKSSSAA	11	Unmodified	_VGGREKSSSAA_					0	0	0			REV__ENSG00000124610|ENST00000244573|H1-1	REV__ENSG00000124610|ENST00000244573|H1-1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	524.772719	1047.53089	0.57996	0.00030435	-3.2921	-0.0017276	-2.7122	-0.0014233	524.7713456119509	23.603	0.2692	25.254	25.085	25.354	1.6511	0.0070671	3.596E-05	NaN	3.2813	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749520	+		36418	9652	18076	18154							0.009021789441476358
VGGRGMASSS	10	Unmodified	_VGGRGMASSS_					0	0	0		ENST00000300853.7_1_19:45912155-45912317:-|nuORF	ENST00000300853.7_1_19:45912155-45912317:-|nuORF	ENST00000300853.7_1_19:45912155-45912317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.7180358767509	2	454.716359	907.418164	2.8285	0.0012861	2.5942	0.0011796	5.4227	0.0024658	454.7170608884676	72.378	0.48933	73.708	73.423	73.913	1.3298					41	15	3	0	0	0	0.88314	1	30373	30373		3.2813	0.97858	1	7450000			36419	5758	18077	18155	42531	42531					-0.039247930535452724
VGGRGPGA	8	Unmodified	_VGGRGPGA_					0	0	0		ENST00000589240.1_1_17:74261784-74261943:+|nuORF	ENST00000589240.1_1_17:74261784-74261943:+|nuORF	ENST00000589240.1_1_17:74261784-74261943:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	670.3625366091728	1	670.363099	669.355822	3.1875	0.0021368	-1.7845	-0.0011963	1.4029	0.00094047	670.3619051622724	99.285	0.2485	99.483	99.406	99.654	0.19767					13	7	2	0	0	0	0.89008	1	41800	41800		2.5775	0	1	10063000			36420	7473	18078	18156	42532	42532					0.00791848660423966
VGGRIKKF	8	Unmodified	_VGGRIKKF_					0	0	0			REV__ENSG00000162409|ENST00000371244|PRKAA2	REV__ENSG00000162409|ENST00000371244|PRKAA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	302.1961242556572	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.747	1	14.473	13.973	14.973	0.72639								0	0	0	1.0178	1	5709	5709		1.6526	0.17072	1		+		36421	10644	18079	18157	42533	42533					0.10978091613560537
VGGRPLLL	8	Unmodified	_VGGRPLLL_					0	0	0			REV__IGSF3|p.L764Pfs*100|1|0.09|ENSG00000143061|chr1:116588845-116588846|-/C|frameshift_variant	REV__IGSF3|p.L764Pfs*100|1|0.09|ENSG00000143061|chr1:116588845-116588846|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	824.5421630740166	1	824.535249	823.527973	2.9737	0.0024519	3.6412	0.0030023	6.6149	0.0054542	824.5380700765485	109.45	0.38394	109.61	109.42	109.8	0.1548					45	15	4	0	0	0	0.89176	1	47499	47499		0.79363	0	1	388280000	+		36422	14229	18080	18158	42534	42534					0.10915000347961268
VGGRQLPI	8	Unmodified	_VGGRQLPI_					0	0	0			REV__ENST00000566556.1_1_15:75189816-75190068:+|nuORF	REV__ENST00000566556.1_1_15:75189816-75190068:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2608825564384	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.61	1	101.68	101.18	102.18	0.067009								0	0	0	1.0178	1	42543	42543		0.79363	0	1		+		36423	11254	18081	18159	42535	42535					0.0767752582552248
VGGRQLPI	8	Unmodified	_VGGRQLPI_					0	0	0			REV__ENST00000566556.1_1_15:75189816-75190068:+|nuORF	REV__ENST00000566556.1_1_15:75189816-75190068:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	420.2616760134697	2	420.25852	838.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.73	1	101.8	101.3	102.3	0.067009								0	0	0	1.0178	1	42593	42593		0.79363	0	1		+		36424	11254	18081	18159	42536	42536					0.0767752582552248
VGGRQRGI	8	Unmodified	_VGGRQRGI_					0	0	0			REV__ENST00000557815.1_1_15:70350845-70351103:-|nuORF	REV__ENST00000557815.1_1_15:70350845-70351103:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	842.4985839724541	1	842.49551	841.488233	1.7372	0.0014635	1.0256	0.00086403	2.7627	0.0023276	842.4960187767418	71.689	0.37852	72.012	71.816	72.195	0.32359					19	11	2	0	0	0	0.89176	1	29985	29985		0.79363	0	1	1777800	+		36425	13876	18082	18160	42537	42537					0.06114873397245901
VGGRSDVPLT	10	Unmodified	_VGGRSDVPLT_					0	0	0			REV__ENST00000515565.1_1_5:55135402-55135780:-|nuORF	REV__ENST00000515565.1_1_5:55135402-55135780:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1854125857353	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.439	1	16.266	15.766	16.766	0.82643								0	0	0	0.66218	1	6416	6416		0.77653	0	1		+		36426	13599	18083	18161	42538	42538					0.03512268437839339
VGGRSDVPLT	10	Unmodified	_VGGRSDVPLT_					0	0	0			REV__ENST00000515565.1_1_5:55135402-55135780:-|nuORF	REV__ENST00000515565.1_1_5:55135402-55135780:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1846191287041	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.546	1	16.373	15.873	16.873	0.82643								0	0	0	0.66218	1	6461	6461		0.77653	0	1		+		36427	13599	18083	18161	42539	42539					0.03512268437839339
VGGSALPK	8	Unmodified	_VGGSALPK_					0	0	0			REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	365.1928283572197	2	364.718696	727.422839	-1.17	-0.00042672	3.8745	0.0014131	2.7045	0.00098638	364.71999276490277	13.452	0.21634	14.178	14.07	14.286	0.72639					10	6	2	0	0	0	2.3239	1	5606	5606		5.7604	0	1	1145400	+		36428	8312	18084	18162	42540	42540					0.04822459151523617
VGGSALPK	8	Unmodified	_VGGSALPK_					0	0	0			REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	364.718696	727.422839	-1.9946	-0.00072747	5.9526	0.002171	3.958	0.0014436	364.7208015462517	13.851	0.12498	13.851	13.794	13.919	0	-0.16062	0.0015792	NaN	9.3474	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	233830	+		36429	8312	18084	18162							0.04822459151523617
VGGSALPK	8	Unmodified	_VGGSALPK_					0	0	0			REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	REV__chr3:109304670-109308032|122|23.25|0.14|7.35|-|0|DPPA2,DPPA2|2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	364.718696	727.422839	0.031378	1.1444E-05	2.9332	0.0010698	2.9645	0.0010812	364.71970012260834	13.849	0.21701	13.948	13.812	14.029	0.09944	-0.063456	-0.00062328	NaN	9.3474	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1215400	+		36430	8312	18084	18162							0.04822459151523617
VGGSCCGM	8	Unmodified	_VGGSCCGM_					0	0	0		ENST00000591636.5_1_19:45926682-45926712:-|nuORF	ENST00000591636.5_1_19:45926682-45926712:-|nuORF	ENST00000591636.5_1_19:45926682-45926712:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	357.1232177615166	2	357.124402	712.234252	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.231	1	21.231	20.731	21.731	0								0	0	0	1.0178	1	8828	8828		0.79363	0.79363	1				36431	7488	18085	18163	42541	42541					-0.1333760108026354
VGGSRGGS	8	Unmodified	_VGGSRGGS_					0	0	0			REV__nc|ENSG00000142233|Q8WTR8-2|NTN5	REV__nc|ENSG00000142233|Q8WTR8-2|NTN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	676.3390380740166	1	676.337278	675.330001	2.0494	0.0013861	0.11909	8.0547E-05	2.1685	0.0014667	676.3371499843572	77.022	0.56504	77.022	76.719	77.284	0					31	17	2	0	0	0	0.87935	1	32150	32150		9.3474	0	1	1074800	+		36432	10174	18086	18164	42542	42542					-0.020650455818440605
VGGSVGCFDTL	11	Unmodified	_VGGSVGCFDTL_					0	0	0		ENST00000411637.6_2_9:134000990-134001116:+|nuORF	ENST00000411637.6_2_9:134000990-134001116:+|nuORF	ENST00000411637.6_2_9:134000990-134001116:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.7463256716728	2	527.747324	1053.4801	1.7965	0.00094808	-2.2026	-0.0011624	-0.40613	-0.00021433	527.7457539188815	67.212	1.1486	67.212	66.64	67.789	0					51	36	2	0	0	0	0.95983	1	28120	28120		6.2058	0.44535	1	867710			36433	6382	18087	18165	42543	42543					-0.04450486425048439
VGGSWFDH	8	Unmodified	_VGGSWFDH_					0	0	0		nc|ENSG00000196228|Q6IMI6|SULT1C3;ENSG00000196228|ENST00000681802|SULT1C3	nc|ENSG00000196228|Q6IMI6|SULT1C3	nc|ENSG00000196228|Q6IMI6|SULT1C3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.7021667361259	2	452.701035	903.387516	1.5682	0.00070992	1.34	0.00060664	2.9082	0.0013166	452.7016577489921	69.081	0.34108	69.081	68.893	69.234	0					22	10	3	0	0	0	0.89176	1	28793	28793		0.79363	0	1	1400000			36434	4925	18088	18166	42544	42544					-0.06804203376282203
VGGTASTG	8	Unmodified	_VGGTASTG_					0	0	0		ENSG00000175104|ENST00000526995|TRAF6	ENSG00000175104|ENST00000526995|TRAF6	ENSG00000175104|ENST00000526995|TRAF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	325.1625854372978	2	325.161211	648.307869	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.409	1	85.661	85.161	86.161	0.25227								0	0	0	1.0178	1	35713	35713		0.69038	0	1				36435	4353	18089	18167	42545	42545					-0.030352700502703556
VGGTATLT	8	Unmodified	_VGGTATLT_					0	0	0			REV__ENST00000473330.1_1_7:5642709-5645102:+|nuORF	REV__ENST00000473330.1_1_7:5642709-5645102:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2012817263603	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.4572	1	1.193	0.69299	1.693	0.73579								0	0	0	1.0178	1	188	188		2.8892	0	1		+		36436	8764	18090	18168	42546	42546					0.015661625349594033
VGGTATLT	8	Unmodified	_VGGTATLT_					0	0	0			REV__ENST00000473330.1_1_7:5642709-5645102:+|nuORF	REV__ENST00000473330.1_1_7:5642709-5645102:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2009155154228	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.423	1	16.462	15.962	16.962	1.0392								0	0	0	1.0178	1	6398	6398		5.2307	0	1		+		36437	8764	18090	18168	42547	42547					0.015661625349594033
VGGTGGGG	8	Unmodified	_VGGTGGGG_					0	0	0			REV__nc|ENSG00000204227|Q06587-2|RING1	REV__nc|ENSG00000204227|Q06587-2|RING1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2635986208916	1	561.262716	560.255439	2.1822	0.0012248	1.7294	0.00097066	3.9117	0.0021955	561.2642359972053	43.883	0.2546	45.827	45.639	45.893	1.9438					12	7	2	0	0	0	0.88958	1	18414	18414		2.8892	0	1	811160	+		36438	11774	18091	18169	42548	42548					-0.042278083932387744
VGGTGGGG	8	Unmodified	_VGGTGGGG_					0	0	0			REV__nc|ENSG00000204227|Q06587-2|RING1	REV__nc|ENSG00000204227|Q06587-2|RING1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	561.262716	560.255439	1.4658	0.00082272	5.3802	0.0030197	6.846	0.0038424	561.2655974966809	46.038	0.38047	46.038	45.786	46.166	0	0.13145	1.5146E-05	NaN	2.8892	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	823380	+		36439	11774	18091	18169							-0.042278083932387744
VGGTGGGG	8	Unmodified	_VGGTGGGG_					0	0	0			REV__nc|ENSG00000204227|Q06587-2|RING1	REV__nc|ENSG00000204227|Q06587-2|RING1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	561.262716	560.255439	1.682	0.00094404	5.6339	0.0031621	7.3159	0.0041061	561.2656459513603	45.635	0.35968	45.964	45.785	46.144	0.32899	0.057265	0.00015753	NaN	2.8892	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	679760	+		36440	11774	18091	18169							-0.042278083932387744
VGGTGGGG	8	Unmodified	_VGGTGGGG_					0	0	0			REV__nc|ENSG00000204227|Q06587-2|RING1	REV__nc|ENSG00000204227|Q06587-2|RING1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	561.262716	560.255439	2.4899	0.0013975	5.9439	0.0033361	8.4339	0.0047336	561.2655818158174	44.433	0.60408	45.798	45.327	45.931	1.3653	-0.10872	0.00033156	NaN	2.8892	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1148700	+		36441	11774	18091	18169							-0.042278083932387744
VGGTGGGG	8	Unmodified	_VGGTGGGG_					0	0	0			REV__nc|ENSG00000204227|Q06587-2|RING1	REV__nc|ENSG00000204227|Q06587-2|RING1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	561.262716	560.255439	2.1822	0.0012248	1.7294	0.00097066	3.9117	0.0021955	561.2642359972053	43.883	0.2546	45.827	45.639	45.893	1.9438	-0.079994	-0.0020339	NaN	2.8892	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	811160	+		36442	11774	18091	18169							-0.042278083932387744
VGGVAGGG	8	Unmodified	_VGGVAGGG_					0	0	0			REV__ENST00000278840.8_1_11:61595644-61605301:+|nuORF	REV__ENST00000278840.8_1_11:61595644-61605301:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3023559451103	1	573.299101	572.291825	0.86909	0.00049825	3.3297	0.0019089	4.1988	0.0024072	573.3010378285874	55.694	0.40615	57.104	56.822	57.228	1.4099					29	18	2	0	0	0	0.88958	1	23292	23292		2.8892	0	1	6802300	+		36443	12250	18092	18170	42549	42549					-0.0114293149651985
VGGVAGGG	8	Unmodified	_VGGVAGGG_					0	0	0			REV__ENST00000278840.8_1_11:61595644-61605301:+|nuORF	REV__ENST00000278840.8_1_11:61595644-61605301:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	573.299101	572.291825	0.30147	0.00017283	5.1262	0.0029388	5.4277	0.0031117	573.301892628596	55.146	0.41005	57.115	56.809	57.219	1.9684	0.0053949	0.00036227	NaN	2.8892	32	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6416700	+		36444	12250	18092	18170							-0.0114293149651985
VGGVEHCS	8	Unmodified	_VGGVEHCS_					0	0	0		ENST00000457828.6_1_21:47648618-47648693:-|nuORF;ENST00000356396.8_1_21:47647593-47648693:-|nuORF	ENST00000457828.6_1_21:47648618-47648693:-|nuORF	ENST00000457828.6_1_21:47648618-47648693:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.1743957400322	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.372	1	19.565	19.065	20.065	0.19342								0	0	0	1.0178	1	8046	8046		2.8892	2.0956	1				36445	5987	18093	18171	42550	42550					-0.0686753851936146
VGGVEHCS	8	Unmodified	_VGGVEHCS_					0	0	0		ENST00000457828.6_1_21:47648618-47648693:-|nuORF;ENST00000356396.8_1_21:47647593-47648693:-|nuORF	ENST00000457828.6_1_21:47648618-47648693:-|nuORF	ENST00000457828.6_1_21:47648618-47648693:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	394.1742126345634	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.552	1	19.746	19.246	20.246	0.19342								0	0	0	1.0178	1	8123	8123		2.8892	2.0956	1				36446	5987	18093	18171	42551	42551					-0.0686753851936146
VGGVVLLKGF	10	Unmodified	_VGGVVLLKGF_					0	0	0			REV__nc|ENSG00000204385|Q53GD3-2|SLC44A4	REV__nc|ENSG00000204385|Q53GD3-2|SLC44A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.2111999392509	3	330.211177	987.611703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.134	1	16.03	15.53	16.53	0.89664								0	0	0	0.66218	1	6278	6278		0.77653	0.31819	1		+		36447	8420	18094	18172	42552	42552					0.11740111724998314
VGGVYYFAYHV	11	Unmodified	_VGGVYYFAYHV_					0	0	0		ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	ENSG00000171812|ENST00000397799|COL8A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	638.3135864138603	2	637.813856	1273.61316	1.6412	0.0010468	-2.5413	-0.0016209	-0.90015	-0.00057413	637.8118544638023	79.281	1.2136	79.582	78.823	80.037	0.30046					76	38	3	0	0	0	1.0357	1	33223	33223		1.4819	0.28856	1	821540			36448	4209	18095	18173	42553	42553					-0.012702989769195483
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533996462822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.372	1	20.431	19.931	20.931	1.0585								0	0	0	1.0178	1	8070	8070		0.79363	0	1		+		36449	10958	18096	18174	42554	42554					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534301638603	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.468	1	20.527	20.027	21.027	1.0585								0	0	0	1.0178	1	8109	8109		0.79363	0	1		+		36450	10958	18096	18174	42555	42555					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533691287041	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.564	1	20.623	20.123	21.123	1.0585								0	0	0	1.0178	1	8149	8149		0.79363	0	1		+		36451	10958	18096	18174	42556	42556					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1536132693291	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.658	1	20.716	20.216	21.216	1.0585								0	0	0	1.0178	1	8187	8187		0.79363	0	1		+		36452	10958	18096	18174	42557	42557					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1537353396416	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.753	1	20.812	20.312	21.312	1.0585								0	0	0	1.0178	1	8226	8226		0.79363	0	1		+		36453	10958	18096	18174	42558	42558					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535827517509	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.85	1	20.908	20.408	21.408	1.0585								0	0	0	1.0178	1	8265	8265		0.79363	0	1		+		36454	10958	18096	18174	42559	42559					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535827517509	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.944	1	21.002	20.502	21.502	1.0585								0	0	0	1.0178	1	8304	8304		0.79363	0	1		+		36455	10958	18096	18174	42560	42560					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1537048220634	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.039	1	21.102	20.602	21.602	1.0634								0	0	0	1.0178	1	8343	8343		0.79363	0	1		+		36456	10958	18096	18174	42561	42561					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535217165947	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.132	1	21.258	20.758	21.758	1.1254								0	0	0	1.0178	1	8383	8383		0.79363	0	1		+		36457	10958	18096	18174	42562	42562					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1532775759697	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.249	1	21.374	20.874	21.874	1.1254								0	0	0	1.0178	1	8434	8434		0.79363	0	1		+		36458	10958	18096	18174	42563	42563					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533691287041	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.369	1	21.495	20.995	21.995	1.1254								0	0	0	1.0178	1	8487	8487		0.79363	0	1		+		36459	10958	18096	18174	42564	42564					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533996462822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.484	1	21.609	21.109	22.109	1.1254								0	0	0	1.0178	1	8537	8537		0.79363	0	1		+		36460	10958	18096	18174	42565	42565					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534301638603	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.788	1	21.914	21.414	22.414	1.1254								0	0	0	1.0178	1	8667	8667		0.79363	0	1		+		36461	10958	18096	18174	42566	42566					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533691287041	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.909	1	22.034	21.534	22.534	1.1254								0	0	0	1.0178	1	8720	8720		0.79363	0	1		+		36462	10958	18096	18174	42567	42567					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1532775759697	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.027	1	22.153	21.653	22.653	1.1254								0	0	0	1.0178	1	8772	8772		0.79363	0	1		+		36463	10958	18096	18174	42568	42568					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1531249880791	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.141	1	22.266	21.766	22.766	1.1254								0	0	0	1.0178	1	8824	8824		0.79363	0	1		+		36464	10958	18096	18174	42569	42569					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1528808474541	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.257	1	22.39	21.89	22.89	1.1332								0	0	0	1.0178	1	8874	8874		0.79363	0	1		+		36465	10958	18096	18174	42570	42570					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534911990166	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.575	1	23.79	23.29	24.29	1.2145								0	0	0	1.0178	1	9433	9433		0.79363	0	1		+		36466	10958	18096	18174	42571	42571					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1532165408134	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.725	1	23.94	23.44	24.44	1.2145								0	0	0	1.0178	1	9498	9498		0.79363	0	1		+		36467	10958	18096	18174	42572	42572					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534911990166	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.152	1	24.366	23.866	24.866	1.2145								0	0	0	1.0178	1	9678	9678		0.79363	0	1		+		36468	10958	18096	18174	42573	42573					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534301638603	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.246	1	24.46	23.96	24.96	1.2145								0	0	0	1.0178	1	9717	9717		0.79363	0	1		+		36469	10958	18096	18174	42574	42574					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533996462822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.339	1	24.553	24.053	25.053	1.2145								0	0	0	1.0178	1	9757	9757		0.79363	0	1		+		36470	10958	18096	18174	42575	42575					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1536437869072	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.434	1	24.648	24.148	25.148	1.2145								0	0	0	1.0178	1	9797	9797		0.79363	0	1		+		36471	10958	18096	18174	42576	42576					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534301638603	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.551	1	24.765	24.265	25.265	1.2145								0	0	0	1.0178	1	9847	9847		0.79363	0	1		+		36472	10958	18096	18174	42577	42577					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533386111259	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.644	1	24.859	24.359	25.359	1.2145								0	0	0	1.0178	1	9887	9887		0.79363	0	1		+		36473	10958	18096	18174	42578	42578					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533996462822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.737	1	24.978	24.478	25.478	1.241								0	0	0	1.0178	1	9926	9926		0.79363	0	1		+		36474	10958	18096	18174	42579	42579					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1534606814384	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.829	1	25.07	24.57	25.57	1.241								0	0	0	1.0178	1	9965	9965		0.79363	0	1		+		36475	10958	18096	18174	42580	42580					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1533691287041	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.921	1	25.162	24.662	25.662	1.241								0	0	0	1.0178	1	10003	10003		0.79363	0	1		+		36476	10958	18096	18174	42581	42581					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1518432497978	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.485	1	34.76	34.26	35.26	1.2746								0	0	0	1.0178	1	14046	14046		0.79363	0	1		+		36477	10958	18096	18174	42582	42582					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535827517509	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.574	1	34.849	34.349	35.349	1.2746								0	0	0	1.0178	1	14083	14083		0.79363	0	1		+		36478	10958	18096	18174	42583	42583					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1520263552666	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.204	1	35.479	34.979	35.979	1.2746								0	0	0	1.0178	1	14358	14358		0.79363	0	1		+		36479	10958	18096	18174	42584	42584					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1517822146416	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.34	1	35.614	35.114	36.114	1.2746								0	0	0	1.0178	1	14415	14415		0.79363	0	1		+		36480	10958	18096	18174	42585	42585					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1527282595634	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.52	1	35.794	35.294	36.294	1.2746								0	0	0	1.0178	1	14489	14489		0.79363	0	1		+		36481	10958	18096	18174	42586	42586					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1524841189384	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.07	1	34.894	34.394	35.394	1.8246								0	0	0	1.0178	1	13862	13862		0.79363	0	1		+		36482	10958	18096	18174	42587	42587					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1533996462822	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.003	1	35.826	35.326	36.326	1.8227								0	0	0	1.0178	1	14260	14260		0.79363	0	1		+		36483	10958	18096	18174	42588	42588					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1539794802666	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.878	1	62.843	62.343	63.343	1.9653								0	0	0	1.0178	1	25546	25546		0.79363	0	1		+		36484	10958	18096	18174	42589	42589					-0.1008018163813631
VGGYDSDG	8	Unmodified	_VGGYDSDG_					0	0	0			REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	REV__ENST00000471727.3_1_2:68758519-68795411:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1536437869072	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.919	1	64.864	64.364	65.364	1.9444								0	0	0	1.0178	1	26402	26402		0.79363	0	1		+		36485	10958	18096	18174	42590	42590					-0.1008018163813631
VGGYYPGIIL	10	Unmodified	_VGGYYPGIIL_					0	0	0		ENSG00000184497|ENST00000375353|TMEM255B	ENSG00000184497|ENST00000375353|TMEM255B	ENSG00000184497|ENST00000375353|TMEM255B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2969238162041	2	526.294768	1050.57498	0.31089	0.00016362	2.3183	0.0012201	2.6292	0.0013838	526.2963963045283	56.205	0.37663	57.615	57.435	57.811	1.4099					35	14	3	0	0	0	0.70643	1	23629	23629		18.135	1.1927	1	5785400			36486	4695	18097	18175	42591	42591					0.051718151084287456
VGHDFQGY	8	Unmodified	_VGHDFQGY_					0	0	0			REV__ENSG00000092295|ENST00000206765|TGM1	REV__ENSG00000092295|ENST00000206765|TGM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1460143923759	2	461.706317	921.398081	3.2707	0.0015101	1.4673	0.00067748	4.738	0.0021876	461.70674801918153	74.742	0.34142	75.066	74.864	75.205	0.32464					18	10	3	0	0	0	2.3239	1	31294	31294		0	0	1	892750	+		36487	8913	18098	18176	42592	42592					-0.06576220721854042
VGHGFCDRH	9	Unmodified	_VGHGFCDRH_					0	0	0		ENST00000393802.6_1_5:171303331-171303415:-|nuORF	ENST00000393802.6_1_5:171303331-171303415:-|nuORF	ENST00000393802.6_1_5:171303331-171303415:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.3029052615166	3	343.155737	1026.44538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0392	1	6.0392	5.5392	6.5392	0								0	0	0	0.42693	1	2481	2481		1.1933	0	1				36488	6274	18099	18177	42593	42593					-0.06678264722518179
VGHHWPCRVIS	11	Unmodified	_VGHHWPCRVIS_					0	0	0			REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883239626884	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.762	1	12.55	12.05	13.05	0.78751								0	0	0	0.63775	1	4883	4883		0.50596	0.23694	1		+		36489	12943	18100	18178	42594	42594					0.011907902252232816
VGHHWPCRVIS	11	Unmodified	_VGHHWPCRVIS_					0	0	0			REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888732790947	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.62	1	13.407	12.907	13.907	0.78751								0	0	0	0.63775	1	5235	5235		0.50596	0.23694	1		+		36490	12943	18100	18178	42595	42595					0.011907902252232816
VGHHWPCRVIS	11	Unmodified	_VGHHWPCRVIS_					0	0	0			REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	REV__ENST00000415794.1_1_3:139212742-139212994:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.742	1	13.529	13.029	14.029	0.78751								0	0	0	0.63775	1	5286	5286		0.50596	0.23694	1		+		36491	12943	18100	18178	42596	42596					0.011907902252232816
VGHKFYGPR	9	Unmodified	_VGHKFYGPR_					0	0	0		nc|ENSG00000132330|Q96I15-2|SCLY;ENSG00000132330|ENST00000254663|SCLY	nc|ENSG00000132330|Q96I15-2|SCLY	nc|ENSG00000132330|Q96I15-2|SCLY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.7868530154228	2	530.787976	1059.5614	1.3773	0.00073107	-0.42401	-0.00022506	0.95332	0.00050601	530.7877814934767	25.03	1.7448	26.29	25.959	27.704	1.2594					161	56	4	0	0	0	0.46905	2	10799	10799;10882		16.942	0	1	47032000			36492	2527	18101	18179	42597;42598	42597					0.03400002119838064
VGHKFYGPR	9	Unmodified	_VGHKFYGPR_					0	0	0		nc|ENSG00000132330|Q96I15-2|SCLY;ENSG00000132330|ENST00000254663|SCLY	nc|ENSG00000132330|Q96I15-2|SCLY	nc|ENSG00000132330|Q96I15-2|SCLY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.7888061404228	2	530.787976	1059.5614	0.81738	0.00043385	-0.10215	-5.4222E-05	0.71522	0.00037963	530.78809174911	24.691	0.96915	26.375	26.118	27.087	1.6845					72	32	3	0	0	0	0.59203	1	10249	10249		11.64	0	1	4899800			36493	2527	18101	18179	42599	42599					0.03400002119838064
VGHLIRSIP	9	Unmodified	_VGHLIRSIP_					0	0	0		tr|A0A553SKZ7|A0A553SKZ7_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_19665PE=4SV=1	tr|A0A553SKZ7|A0A553SKZ7_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_19665PE=4SV=1	tr|A0A553SKZ7|A0A553SKZ7_NIACIMetallophosphoesteraseOS=NialliacirculansOX=1397GN=CEQ21_19665PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.3051635622978	2	496.306001	990.597449	1.5841	0.00078618	-3.5967	-0.0017851	-2.0127	-0.00099889	496.30440915894667	64.49	1.812	64.49	63.832	65.644	0					73	56	2	0	0	0	0.82604	1	26900	26900		2.3027	0	1	794100			36494	16316	18102	18180	42600	42600					0.10177459296698999
VGHPPAALCL	10	Unmodified	_VGHPPAALCL_					0	0	0		ENST00000602717.5_1_14:77743417-77745166:-|nuORF	ENST00000602717.5_1_14:77743417-77745166:-|nuORF	ENST00000602717.5_1_14:77743417-77745166:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.2659789919853	2	489.265487	976.516422	1.5909	0.00077835	-0.75371	-0.00036876	0.83715	0.00040959	489.26511946810484	38.371	0.75948	39.667	39.184	39.943	1.2961					47	26	2	0	0	0	0.56346	1	16192	16192		24.674	2.9272	1	54622000			36495	7547	18103	18181	42601	42601					0.027224352622852166
VGHQHLFM	8	Unmodified	_VGHQHLFM_					0	0	0			REV__ENSG00000171132|ENST00000306156|PRKCE	REV__ENSG00000171132|ENST00000306156|PRKCE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7434875369072	2	484.742179	967.469806	1.6481	0.00079889	1.0709	0.00051911	2.719	0.001318	484.7429234654278	25.594	0.33906	25.846	25.705	26.044	0.25197					30	10	4	0	0	0	0.89176	1	10668	10668		0.79363	0	1	3627400	+		36496	11011	18104	18182	42602	42602					-0.015230045689804683
VGHRKPYYK	9	Unmodified	_VGHRKPYYK_					0	0	0			REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3237792849541	2	574.322183	1146.62981	4.2532	0.0024427	-1.3732	-0.00078866	2.88	0.001654	574.3209281893154	90.464	0.4483	91.446	91.268	91.717	0.98157					17	13	2	0	0	0	0.84963	1	38119	38119		0.6015	0	1	1608500	+		36497	15308	18105	18183	42603	42603					0.062362466996773946
VGHRKPYYK	9	Unmodified	_VGHRKPYYK_					0	0	0			REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	574.322183	1146.62981	4.2532	0.0024427	-1.3732	-0.00078866	2.88	0.001654	574.3209281893154	90.464	0.4483	91.446	91.268	91.717	0.98157	0.078754	0.0023274	NaN	0.6015	17	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1608500	+		36498	15308	18105	18183							0.062362466996773946
VGHRKPYYK	9	Unmodified	_VGHRKPYYK_					0	0	0			REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	REV__tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	574.322183	1146.62981	4.1029	0.0023564	-3.9728	-0.0022817	0.13009	7.4711E-05	574.3199571913095	90.194	0.30949	91.599	91.431	91.74	1.4045	0.23164	-0.00065865	NaN	0.6015	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1022700	+		36499	15308	18105	18183							0.062362466996773946
VGHSHSLL	8	Unmodified	_VGHSHSLL_					0	0	0		ENST00000605457.5_1_6:112392617-112397333:-|nuORF;ENSG00000074935|ENST00000368662|TUBE1	ENST00000605457.5_1_6:112392617-112397333:-|nuORF	ENST00000605457.5_1_6:112392617-112397333:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.2321655154228	2	425.232502	848.450451	0.29881	0.00012706	0.20927	8.899E-05	0.50808	0.00021605	425.23246690867495	16.795	0.20238	18.097	17.97	18.173	1.3023					10	6	2	0	0	0	0.88958	1	6968	6968		2.8892	0	1	602620			36500	921	18106	18184	42604	42604					0.020163624117685686
VGHSLLKNIV	10	Unmodified	_VGHSLLKNIV_					0	0	0			REV__ENSG00000030066|ENST00000378460|NUP160	REV__ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3339721560478	2	540.332216	1078.64988	1.5162	0.00081928	-1.485	-0.00080239	0.03125	1.6885E-05	540.3316965259384	67.303	0.99051	67.303	66.99	67.98	0					49	31	2	0	0	0	0.89803	1	28127	28127		1.6526	0	1	928520	+		36501	8574	18107	18185	42605	42605					0.1136999763964468
VGHSLLKNIV	10	Unmodified	_VGHSLLKNIV_					0	0	0			REV__ENSG00000030066|ENST00000378460|NUP160	REV__ENSG00000030066|ENST00000378460|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3311035037041	2	540.332216	1078.64988	1.5193	0.00082091	-2.2831	-0.0012336	-0.7638	-0.0004127	540.3310724957718	71.75	1.2066	71.75	71.446	72.653	0					53	37	2	0	0	0	0.89803	1	29873	29873		1.6526	0	1	1220500	+		36502	8574	18107	18185	42606	42606					0.1136999763964468
VGHTPEEAGV	10	Unmodified	_VGHTPEEAGV_					0	0	0		ENST00000591806.5_1_19:1377879-1378284:+|nuORF	ENST00000591806.5_1_19:1377879-1378284:+|nuORF	ENST00000591806.5_1_19:1377879-1378284:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2444335818291	2	498.243264	994.471974	2.1452	0.0010689	1.2456	0.00062064	3.3909	0.0016895	498.2443755426097	71.745	0.34305	73.569	73.412	73.756	1.824					19	10	3	0	0	0	0.84024	1	30089	30089		7.9102	0	1	1362900			36503	7491	18108	18186	42607	42607					-0.025482973501880224
VGHTPEEAGV	10	Unmodified	_VGHTPEEAGV_					0	0	0		ENST00000591806.5_1_19:1377879-1378284:+|nuORF	ENST00000591806.5_1_19:1377879-1378284:+|nuORF	ENST00000591806.5_1_19:1377879-1378284:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	498.243264	994.471974	2.4103	0.0012009	0.50163	0.00024994	2.9119	0.0014508	498.24390208488126	72.235	0.21767	73.565	73.455	73.672	1.3297	-0.0020934	-0.00043561	NaN	7.9102	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	900120			36504	7491	18108	18186							-0.025482973501880224
VGHVHRRRRRI	11	Unmodified	_VGHVHRRRRRI_					0	0	0		sp|F5HAC7|CEP2_HCMVMCytoplasmicenvelopmentprotein2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL94PE=3SV=1	sp|F5HAC7|CEP2_HCMVMCytoplasmicenvelopmentprotein2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL94PE=3SV=1	sp|F5HAC7|CEP2_HCMVMCytoplasmicenvelopmentprotein2OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL94PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	721.4456664919853	2	721.445426	1440.8763	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.59	1	102.76	102.26	103.26	0.16445								0	0	0	0.63775	1	43201	43201		1.4819	0.15237	1				36505	15972	18109	18187	42608	42608					0.1734959904194966
VGHVWLPRR	9	Unmodified	_VGHVWLPRR_					0	0	0			REV__ENST00000355451.7_1_7:44424710-44424929:-|nuORF	REV__ENST00000355451.7_1_7:44424710-44424929:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3292114138603	2	560.330342	1118.64613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.529	1	62.859	62.359	63.359	0.32974								0	0	0	0.42693	1	26198	26198		0.6015	0	1		+		36506	12543	18110	18188	42609	42609					0.09155372656437066
VGIAPLPT	8	Unmodified	_VGIAPLPT_					0	0	0			REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	767.4643432497978	1	767.466167	766.45889	1.3038	0.0010006	-4.0833	-0.0031338	-2.7795	-0.0021332	767.4625686514789	65.689	0.39018	67.597	67.437	67.828	1.9085					25	12	3	0	0	0	0.89176	2	27540	27540;27589		0.79363	0	1	5238500	+		36507	14721	18111	18189	42610;42611	42610					0.06631916328353782
VGIAPLPT	8	Unmodified	_VGIAPLPT_					0	0	0			REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	767.466167	766.45889	1.7926	0.0013758	-5.7361	-0.0044022	-3.9434	-0.0030265	767.4614678712816	67.168	0.48523	67.168	66.924	67.41	0	-0.24577	-0.00066142	NaN	0.79363	40	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12506000	+		36508	14721	18111	18189							0.06631916328353782
VGIAPLPT	8	Unmodified	_VGIAPLPT_					0	0	0			REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	767.466167	766.45889	1.799	0.0013806	-5.5085	-0.0042276	-3.7095	-0.0028469	767.4616675898443	67.104	0.49307	67.426	67.126	67.619	0.32269	0.012702	-0.00048675	NaN	0.79363	41	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13615000	+		36509	14721	18111	18189							0.06631916328353782
VGIAPLPT	8	Unmodified	_VGIAPLPT_					0	0	0			REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	767.466167	766.45889	1.482	0.0011374	-3.9177	-0.0030067	-2.4357	-0.0018693	767.4627035636609	66.074	0.45215	67.463	67.174	67.626	1.3888	0.049413	0.00073411	NaN	0.79363	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6398800	+		36510	14721	18111	18189							0.06631916328353782
VGIAPLPT	8	Unmodified	_VGIAPLPT_					0	0	0			REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	REV__tr|A0A553SFT8|A0A553SFT8_NIACIUroporphyrinogendecarboxylaseOS=NialliacirculansOX=1397GN=hemEPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	767.466167	766.45889	1.3038	0.0010006	-4.0833	-0.0031338	-2.7795	-0.0021332	767.4625686514789	65.689	0.39018	67.597	67.437	67.828	1.9085	0.18365	0.00060705	NaN	0.79363	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5238500	+		36511	14721	18111	18189							0.06631916328353782
VGIDDSST	8	Unmodified	_VGIDDSST_					0	0	0			REV__tr|A0A7D6VY04|A0A7D6VY04_9CLOTDNAmismatchrepairproteinMutLOS=ClostridiumintestinaleOX=36845GN=mutLPE=3SV=1	REV__tr|A0A7D6VY04|A0A7D6VY04_9CLOTDNAmismatchrepairproteinMutLOS=ClostridiumintestinaleOX=36845GN=mutLPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	397.1831848025322	2	397.18234	792.350128	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.449	1	76.77	76.27	77.27	0.32163								0	0	0	1.0178	1	31975	31975		2.5775	1.7838	1		+		36512	15554	18112	18190	42612	42612					-0.054353394325744375
VGIDGDNN	8	Unmodified	_VGIDGDNN_					0	0	0		tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1800414919853	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.092	1	27.351	26.851	27.851	1.2594								0	0	0	1.0178	1	10928	10928		2.5775	0	1				36513	17285	18113	18191	42613	42613					-0.06336803855469952
VGIDGDNN	8	Unmodified	_VGIDGDNN_					0	0	0		tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	tr|A0A7D7A4D7|A0A7D7A4D7_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02640PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1802245974541	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.213	1	27.484	26.984	27.984	1.2715								0	0	0	1.0178	1	10977	10977		2.5775	0	1				36514	17285	18113	18191	42614	42614					-0.06336803855469952
VGIFGHWR	8	Unmodified	_VGIFGHWR_					0	0	0		ENSG00000168152|ENST00000302236|THAP9	ENSG00000168152|ENST00000302236|THAP9	ENSG00000168152|ENST00000302236|THAP9	MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2635986208916	2	486.264136	970.51372	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.616	1	30.898	30.398	31.398	1.2825								0	0	0	1.0178	1	12426	12426		0.79363	0	1				36515	4019	18114	18192	42615	42615					0.027283479196626104
VGIGGGGG	8	Unmodified	_VGIGGGGG_					0	0	0		ENSG00000114554|ENST00000393409|PLXNA1	ENSG00000114554|ENST00000393409|PLXNA1	ENSG00000114554|ENST00000393409|PLXNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3018676638603	1	573.299101	572.291825	0.86909	0.00049825	3.3297	0.0019089	4.1988	0.0024072	573.3010378285874	55.694	0.40615	57.104	56.822	57.228	1.4099					29	18	2	0	0	0	0.88958	1	23335	23335		2.8892	0	1	6802300			36516	1870	18115	18193	42616	42616					-0.0114293149651985
VGIGKQIDFI	10	Unmodified	_VGIGKQIDFI_					0	0	0			REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3168823122978	2	545.318774	1088.623	1.5524	0.00084657	-2.7566	-0.0015033	-1.2042	-0.00065668	545.3171760405941	74.03	1.264	74.03	73.795	75.059	0					77	39	4	0	0	0	0.87343	2	31072	30783;31072		4.3292	0.73274	1	3210400	+		36517	15339	18116	18194	42617;42618	42618					0.08222889028456848
VGIGKQIDFI	10	Unmodified	_VGIGKQIDFI_					0	0	0			REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3174926638603	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.082	1	71.405	70.905	71.905	0.32359								0	0	0	0.66008	1	29752	29752		4.3292	0.73274	1		+		36518	15339	18116	18194	42619	42619					0.08222889028456848
VGIGKQIDFI	10	Unmodified	_VGIGKQIDFI_					0	0	0			REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	REV__tr|A0A7D6VNM6|A0A7D6VNM6_9CLOTMinorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13190PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3180419802666	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.98	1	74.305	73.805	74.805	0.32494								0	0	0	0.66155	1	30947	30947		1.8442	0.19162	1		+		36519	15339	18116	18194	42620	42620					0.08222889028456848
VGIGVDKK	8	Unmodified	_VGIGVDKK_					0	0	0		tr|A0A7D6VRH3|A0A7D6VRH3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_05565PE=4SV=1	tr|A0A7D6VRH3|A0A7D6VRH3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_05565PE=4SV=1	tr|A0A7D6VRH3|A0A7D6VRH3_9CLOTBifunctionaldiguanylatecyclase/phosphodiesteraseOS=ClostridiumintestinaleOX=36845GN=HZF06_05565PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2545654177666	2	408.252903	814.491253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.185	1	40.481	39.981	40.981	1.2961								0	0	0	1.0178	1	16440	16440		2.8892	0.31174	1				36520	16831	18117	18195	42621	42621					0.07658703731374317
VGIHIGIV	8	Unmodified	_VGIHIGIV_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	807.5131713747978	1	807.5087	806.501424	2.7588	0.0022278	2.0376	0.0016454	4.7964	0.0038732	807.5109060411044	109.53	0.21798	109.58	109.43	109.65	0.048851					16	8	2	0	0	0	0.88958	1	47239	47239		2.8892	0	1	3506900	+		36521	11124	18118	18196	42622	42622					0.0904331145661672
VGIHIGIV	8	Unmodified	_VGIHIGIV_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	807.5087	806.501424	1.2717	0.0010269	4.3244	0.003492	5.596	0.0045188	807.5118133543214	109.51	0.25098	109.51	109.39	109.64	0	-0.065388	0.0005362	NaN	2.8892	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5695700	+		36522	11124	18118	18196							0.0904331145661672
VGIHIGIV	8	Unmodified	_VGIHIGIV_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	807.5087	806.501424	2.7588	0.0022278	2.0376	0.0016454	4.7964	0.0038732	807.5109060411044	109.53	0.21798	109.58	109.43	109.65	0.048851	0.0051969	-0.0013104	NaN	2.8892	16	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3506900	+		36523	11124	18118	18196							0.0904331145661672
VGIHIGIV	8	Unmodified	_VGIHIGIV_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	807.5087	806.501424	2.9147	0.0023537	4.3082	0.0034789	7.2229	0.0058326	807.5120881903782	109.44	0.30803	109.59	109.44	109.75	0.1548	0.016002	0.00052314	NaN	2.8892	29	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	66516000	+		36524	11124	18118	18196							0.0904331145661672
VGIILIPIIG	10	Unmodified	_VGIILIPIIG_					0	0	0		tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	504.3484374880791	2	504.346803	1006.67905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.016	1	20.54	20.04	21.04	1.5237								0	0	0	0.66218	1	7906	7906		0.45834	0	1				36525	17260	18119	18197	42623	42623					0.17598141935945932
VGIKAEREEK	10	Unmodified	_VGIKAEREEK_					0	0	0		tr|A0A7D6ZI13|A0A7D6ZI13_9CLOTAminoacidABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02315PE=3SV=1	tr|A0A7D6ZI13|A0A7D6ZI13_9CLOTAminoacidABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02315PE=3SV=1	tr|A0A7D6ZI13|A0A7D6ZI13_9CLOTAminoacidABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02315PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8281127810478	2	579.827495	1157.64044	0.43463	0.00025201	-0.05569	-3.2291E-05	0.37894	0.00021972	579.8274099552119	19.293	0.69822	19.486	19.294	19.992	0.19342					48	22	4	0	0	0	0.87699	1	8085	8085		3.9444	0.94915	1	4732800			36526	17093	18120	18198	42624	42624					0.06792184563460069
VGIKGRRG	8	Unmodified	_VGIKGRRG_					0	0	0		ENST00000525051.5_1_8:144875319-144875475:-|nuORF	ENST00000525051.5_1_8:144875319-144875475:-|nuORF	ENST00000525051.5_1_8:144875319-144875475:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	842.5306274294853	1	842.531895	841.524619	2.0572	0.0017332	-3.9022	-0.0032877	-1.845	-0.0015545	842.5291348407959	81.19	0.21564	81.481	81.4	81.616	0.29055					10	6	2	0	0	0	0.88958	1	33949	33949		2.8892	0	1	581270			36527	7115	18121	18199	42625	42625					0.09751750293935402
VGIKLVNSL	9	Unmodified	_VGIKLVNSL_					0	0	0			REV__tr|A0A553SNE6|A0A553SNE6_NIACIMultidrugexportproteinMepAOS=NialliacirculansOX=1397GN=CEQ21_24230PE=3SV=1	REV__tr|A0A553SNE6|A0A553SNE6_NIACIMultidrugexportproteinMepAOS=NialliacirculansOX=1397GN=CEQ21_24230PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	472.2781555056572	2	471.80276	941.590967	3.6607	0.0017271	-3.8175	-0.0018011	-0.15678	-7.3969E-05	471.7994019934571	60.406	0.40848	62.371	62.073	62.482	1.9653					20	12	2	0	0	0	0.084274	1	25299	25299		23.148	3.7094	1	1076100	+		36528	15051	18122	18200	42626	42626					0.11783521345330428
VGIKTVSGTV	10	Unmodified	_VGIKTVSGTV_					0	0	0			REV__ENST00000380041.7_1_X:17755712-17762210:+|nuORF	REV__ENST00000380041.7_1_X:17755712-17762210:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	480.7901794314384	2	480.78985	959.565146	2.3289	0.0011197	-0.68602	-0.00032983	1.6429	0.00078988	480.78967220578886	61.62	0.28891	63.577	63.368	63.657	1.9571					14	8	3	0	0	0	0.846	1	25852	25852		7.2892	1.5288	1	1275600	+		36529	12751	18123	18201	42627	42627					0.08374627103057719
VGIKVRGG	8	Unmodified	_VGIKVRGG_					0	0	0		ENST00000566012.1_1_16:30077179-30079547:+|nuORF;ENST00000564521.6_1_16:30075769-30079042:+|nuORF	ENST00000566012.1_1_16:30077179-30079547:+|nuORF	ENST00000566012.1_1_16:30077179-30079547:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	393.2558471560478	2	393.253237	784.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.886	1	32.702	32.202	33.202	1.8151								0	0	0	1.0178	1	12947	12947		0.79363	0	1				36530	7347	18124	18202	42628	42628					0.09105543171096997
VGIKVRTKSR	10	Unmodified	_VGIKVRTKSR_					0	0	0			REV__tr|A0A7D7A1V3|A0A7D7A1V3_9CLOTCysteine-richKTRdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14000PE=4SV=1	REV__tr|A0A7D7A1V3|A0A7D7A1V3_9CLOTCysteine-richKTRdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14000PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.9146606326103	3	381.915535	1142.72478	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.466	1	59.884	59.384	60.384	1.4181								0	0	0	0.66218	1	24513	24513		0.77653	0.50751	1		+		36531	15835	18125	18203	42629	42629					0.15912180170903412
VGILIAAISNY	11	Unmodified	_VGILIAAISNY_					0	0	0			REV__ENSG00000185862|ENST00000330927|EVI2B	REV__ENSG00000185862|ENST00000330927|EVI2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3309814333916	2	567.331882	1132.64921	1.4425	0.00081838	-2.3291	-0.0013214	-0.88655	-0.00050297	567.3305777779763	71.219	0.67462	71.543	71.174	71.848	0.32359					31	20	2	0	0	0	1.0366	1	29816	29816		1.1933	0	1	703680	+		36532	11478	18126	18204	42630	42630					0.08819158199935373
VGILIFIVLLR	11	Unmodified	_VGILIFIVLLR_					0	0	0		tr|A0A7D6VRB3|A0A7D6VRB3_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01595PE=4SV=1	tr|A0A7D6VRB3|A0A7D6VRB3_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01595PE=4SV=1	tr|A0A7D6VRB3|A0A7D6VRB3_9CLOTYitTfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01595PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.4307128787041	2	628.428659	1254.84277	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103	1	103.18	102.68	103.68	0.18066								0	0	0	0.63775	1	43344	43344		0.35063	0.35063	1				36533	16827	18127	18205	42631	42631					0.22553739706836495
VGILRRILR	9	Unmodified	_VGILRRILR_					0	0	0		ENSG00000156381|ENST00000286918|ANKRD9	ENSG00000156381|ENST00000286918|ANKRD9	ENSG00000156381|ENST00000286918|ANKRD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.9187805056572	3	365.92062	1094.74003	-1.6789	-0.00061435	-2.9228	-0.0010695	-4.6017	-0.0016839	365.9195185328311	20.088	0.18489	20.088	20.011	20.196	0					10	5	3	0	0	0	0.85206	1	8356	8356		0.26902	0	1	2252600			36534	3446	18128	18206	42632	42632					0.19645091758729905
VGILTTFPQP	10	Unmodified	_VGILTTFPQP_					0	0	0		tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	tr|A0A553SIJ4|A0A553SIJ4_NIACIAcyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_15005PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	358.2043029665947	3	358.206092	1071.59645	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.948	1	27.21	26.71	27.71	0.26173								0	0	0	0.66151	1	11267	11267		1.9064	0.062138	1				36535	16204	18129	18207	42633	42633					0.06351200137146407
VGIMPVYFA	9	Unmodified	_VGIMPVYFA_					0	0	0			REV__ENSG00000187918|ENST00000641930|OR51I2	REV__ENSG00000187918|ENST00000641930|OR51I2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7681457400322	2	498.764789	995.515025	2.2914	0.0011429	3.7976	0.0018941	6.089	0.003037	498.7668786370211	85.016	0.44818	85.016	84.781	85.229	0					24	13	2	0	0	0	0.75267	1	35464	35464		5.2307	2.9279	1	1056100	+		36536	11558	18130	18208	42634	42634					0.01708801173538177
VGIPDGPP	8	Unmodified	_VGIPDGPP_					0	0	0		ENSG00000150051|ENST00000419761|MKX	ENSG00000150051|ENST00000419761|MKX	ENSG00000150051|ENST00000419761|MKX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	751.3983032107353	1	751.398481	750.391205	1.841	0.0013833	-3.5583	-0.0026737	-1.7173	-0.0012904	751.3959221295576	66.656	0.28632	66.656	66.512	66.798	0					11	8	2	0	0	0	0.88958	1	27774	27774		2.8892	0	1	459320			36537	3261	18131	18209	42635	42635					0.006024663975722433
VGIPHIRWY	9	Unmodified	_VGIPHIRWY_					0	0	0		CSNK1A1-PDE6A|1|fusion;nc|ENSG00000113712|P48729-3|CSNK1A1;ENSG00000113712|ENST00000377843|CSNK1A1;nc|ENSG00000113712|P48729-2|CSNK1A1	CSNK1A1-PDE6A|1|fusion	CSNK1A1-PDE6A|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.8828002810478	3	380.881943	1139.624	1.2995	0.00049496	0.085192	3.2448E-05	1.3847	0.0005274	380.88216428799296	49.537	1.0899	50.928	50.329	51.419	1.3911					62	34	3	0	0	0	0.50272	2	20737	20683;20737		15.248	6.8042	1	2035800			36538	380	18132	18210	42636;42637	42637					0.05977148188026149
VGIPHIRWY	9	Unmodified	_VGIPHIRWY_					0	0	0		CSNK1A1-PDE6A|1|fusion;nc|ENSG00000113712|P48729-3|CSNK1A1;ENSG00000113712|ENST00000377843|CSNK1A1;nc|ENSG00000113712|P48729-2|CSNK1A1	CSNK1A1-PDE6A|1|fusion	CSNK1A1-PDE6A|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.8827087283134	3	380.881943	1139.624	1.5706	0.00059822	-0.74189	-0.00028257	0.82873	0.00031565	380.88188058396213	48.995	0.92918	50.973	50.483	51.412	1.9772					67	29	3	0	0	0	0.52273	3	20440	20440;20490;20552		14.405	9.6895	1	1974800			36539	380	18132	18210	42638;42639;42640	42638					0.05977148188026149
VGIPLIRERW	10	Unmodified	_VGIPLIRERW_					0	0	0			REV__ENST00000585505.1_1_17:41345458-41345563:+|nuORF	REV__ENST00000585505.1_1_17:41345458-41345563:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8705322146416	2	619.87204	1237.72953	1.764	0.0010935	-3.6461	-0.0022601	-1.8821	-0.0011666	619.8692542314951	77.947	0.73104	78.256	77.943	78.674	0.30932					55	22	3	0	0	0	0.89803	1	32481	32481		0.45834	0	1	1407400	+		36540	14023	18133	18211	42641	42641					0.1201706431365892
VGIPLIRERW	10	Unmodified	_VGIPLIRERW_					0	0	0			REV__ENST00000585505.1_1_17:41345458-41345563:+|nuORF	REV__ENST00000585505.1_1_17:41345458-41345563:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1343566775322	4	310.439658	1237.72953	0.098831	3.0681E-05	0.0066194	2.0549E-06	0.10545	3.2736E-05	310.4396376537558	23.878	1.3133	25.12	24.715	26.028	1.241					115	42	3	0	0	0	0.12554	1	10240	10240		0.15932	0.15932	1	2540000	+		36541	14023	18133	18211	42642	42642					0.1201706431365892
VGIPLSDWL	9	Unmodified	_VGIPLSDWL_					0	0	0		tr|A0A7D6W370|A0A7D6W370_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	tr|A0A7D6W370|A0A7D6W370_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	tr|A0A7D6W370|A0A7D6W370_9CLOTFerrousirontransportproteinBOS=ClostridiumintestinaleOX=36845GN=feoBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2801696658134	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.162	1	34.459	33.959	34.959	0.29701								0	0	0	0.42693	1	14345	14345		2.3027	0	1				36542	17041	18134	18212	42643	42643					0.044352420743166476
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3190185427666	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.66	1	100.87	100.37	101.37	0.20527								0	0	0	0.66031	1	42331	42331		3.9444	0.94915	1				36543	16386	18135	18213	42644	42644					0.06688370796950949
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3237792849541	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.76	1	100.97	100.47	101.47	0.20527								0	0	0	0.66031	1	42370	42370		3.9444	2.1002	1				36544	16386	18135	18213	42645	42645					0.06688370796950949
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3231689333916	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.88	1	101.09	100.59	101.59	0.20527								0	0	0	0.66031	1	42418	42418		3.9444	2.1002	1				36545	16386	18135	18213	42646	42646					0.06688370796950949
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3180419802666	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.17	1	101.36	100.86	101.86	0.19076								0	0	0	0.66031	1	42538	42538		3.9444	2.1002	1				36546	16386	18135	18213	42647	42647					0.06688370796950949
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3210937380791	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.84	1	103.02	102.52	103.52	0.18066								0	0	0	0.66031	1	43278	43278		3.9444	0.3479	1				36547	16386	18135	18213	42648	42648					0.06688370796950949
VGIPSTFYIL	10	Unmodified	_VGIPSTFYIL_					0	0	0		tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	tr|A0A553SMQ9|A0A553SMQ9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_23045PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3188964724541	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.22	1	119.38	118.88	119.88	0.16237								0	0	0	0.66166	1	51445	51445		1.6526	0.96225	1				36548	16386	18135	18213	42649	42649					0.06688370796950949
VGIQLVLS	8	Unmodified	_VGIQLVLS_					0	0	0			REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	REV__ENST00000461162.5_1_9:95887192-95893805:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	828.5164672732353	1	828.518931	827.511654	1.0063	0.00083373	-3.3378	-0.0027655	-2.3315	-0.0019317	828.515922732094	68.932	0.45173	70.785	70.558	71.009	1.853					36	14	3	0	0	0	0.88587	2	28890	28890;28939		5.2307	0	1	15507000	+		36549	9822	18136	18214	42650;42651	42650					0.09099874391188223
VGIRTKESGV	10	Unmodified	_VGIRTKESGV_					0	0	0			REV__nc|ENSG00000187955|Q05707-3|COL14A1	REV__nc|ENSG00000187955|Q05707-3|COL14A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3047363162041	2	523.303655	1044.59276	1.4904	0.00077995	0.051481	2.694E-05	1.5419	0.00080689	523.3038467566931	70.036	2.0531	70.359	69.344	71.397	0.32224					160	65	3	0	0	0	0.89803	1	29697	29697		1.6526	0	1	4121700	+		36550	14511	18137	18215	42652	42652					0.07224530363305348
VGISAIVLG	9	Unmodified	_VGISAIVLG_					0	0	0		nc|ENSG00000082556|P41145-2|OPRK1;ENSG00000082556|ENST00000265572|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	nc|ENSG00000082556|P41145-2|OPRK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	828.5240966677666	1	828.518931	827.511654	1.9889	0.0016478	-0.56223	-0.00046582	1.4266	0.001182	828.5189647849356	81.156	0.34158	81.156	80.977	81.319	0					17	10	2	0	0	0	0.34572	1	33836	33836		23.148	0	1	998640			36551	1033	18138	18216	42653	42653					0.09099874391176854
VGISSGGG	8	Unmodified	_VGISSGGG_					0	0	0			REV__CON__Q922U2	REV__CON__Q922U2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3229247927666	1	633.320231	632.312954	1.7417	0.001103	3.7532	0.002377	5.4949	0.00348	633.322529182554	53.537	0.43922	53.86	53.631	54.07	0.32283					19	13	2	0	0	0	0.89176	2	22388	22388;22437		0.79363	0	1	547760	+	+	36552	8397	18139	18217	42654;42655	42654					-0.01790966187650156
VGISSGGG	8	Unmodified	_VGISSGGG_					0	0	0			REV__CON__Q922U2	REV__CON__Q922U2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	633.320231	632.312954	2.2175	0.0014044	5.2601	0.0033314	7.4777	0.0047358	633.3234973809514	54.162	0.5429	54.162	53.905	54.448	0	0.15098	0.00044887	NaN	0.79363	27	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	472720	+	+	36553	8397	18139	18217							-0.01790966187650156
VGISSGGG	8	Unmodified	_VGISSGGG_					0	0	0			REV__CON__Q922U2	REV__CON__Q922U2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	633.320231	632.312954	1.7417	0.001103	3.7532	0.002377	5.4949	0.00348	633.322529182554	53.537	0.43922	53.86	53.631	54.07	0.32283	-0.15098	-0.00050548	NaN	0.79363	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	547760	+	+	36554	8397	18139	18217							-0.01790966187650156
VGITKANPLVK	11	Unmodified	_VGITKANPLVK_					0	0	0			REV__tr|A0A7D6VTW5|A0A7D6VTW5_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09340PE=4SV=1	REV__tr|A0A7D6VTW5|A0A7D6VTW5_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09340PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3607665896416	2	570.360973	1138.70739	1.8502	0.0010553	-2.4413	-0.0013924	-0.59109	-0.00033713	570.3598847343421	80.689	0.59126	80.98	80.84	81.431	0.29056					42	18	3	0	0	0	1.0214	1	33731	33731		2.4985	1.169	1	1648900	+		36555	15503	18140	18218	42656	42656					0.14358839845203875
VGITLGTTVTV	11	Unmodified	_VGITLGTTVTV_					0	0	0		tr|A0A553SSE9|A0A553SSE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02995PE=4SV=1	tr|A0A553SSE9|A0A553SSE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02995PE=4SV=1	tr|A0A553SSE9|A0A553SSE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02995PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	530.2167236208916	2	530.816064	1059.61758	1.9049	0.0010112	1.0926	0.00057996	2.9975	0.0015911	530.8166932181044	42.969	0.18457	43.293	43.2	43.384	0.32389					9	5	2	0	0	0	0.13936	1	18038	18038		27.629	4.9707	1	474800			36556	16610	18141	18219	42657	42657					0.09015165445998718
VGITPIIVSI	10	Unmodified	_VGITPIIVSI_					0	0	0			REV__tr|A0A553SPM9|A0A553SPM9_NIACIMetalABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26635PE=3SV=1	REV__tr|A0A553SPM9|A0A553SPM9_NIACIMetalABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26635PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	338.2434875369072	3	337.886471	1010.63758	-0.18859	-6.3723E-05	3.9876	0.0013473	3.799	0.0012836	337.88700245202267	17.856	0.14129	19.304	19.204	19.346	1.448					6	4	2	0	0	0	0.12559	1	7402	7402		0.77653	0.50751	1	168220	+		36557	15095	18142	18220	42658	42658					0.13268961176606808
VGITPIIVSI	10	Unmodified	_VGITPIIVSI_					0	0	0			REV__tr|A0A553SPM9|A0A553SPM9_NIACIMetalABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26635PE=3SV=1	REV__tr|A0A553SPM9|A0A553SPM9_NIACIMetalABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_26635PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	337.886471	1010.63758	-2.5514	-0.00086208	5.2156	0.0017623	2.6643	0.00090022	337.8882361115007	19.558	0.15683	19.558	19.446	19.603	0	0.12666	0.000153	NaN	0.77653	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	516850	+		36558	15095	18142	18220							0.13268961176606808
VGITVGFGRI	10	Unmodified	_VGITVGFGRI_					0	0	0		tr|A0A553SPV1|A0A553SPV1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10400PE=4SV=1	tr|A0A553SPV1|A0A553SPV1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10400PE=4SV=1	tr|A0A553SPV1|A0A553SPV1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_10400PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8041869997978	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.888	1	67.796	67.296	68.296	1.9085								0	0	0	0.64816	1	27641	27641		15.847	4.2069	1				36559	16484	18143	18221	42659	42659					0.08902039576844345
VGIVGEKQ	8	Unmodified	_VGIVGEKQ_					0	0	0			REV__nc|ENSG00000100242|Q9UH99-3|SUN2	REV__nc|ENSG00000100242|Q9UH99-3|SUN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2419921755791	2	415.242535	828.470518	1.4902	0.00061878	-3.2326	-0.0013423	-1.7425	-0.00072354	415.241074279596	70.012	0.40742	70.334	70.066	70.474	0.32224					36	12	4	0	0	0	0.89176	1	29302	29302		0.79363	0	1	10279000	+		36560	8976	18144	18222	42660	42660					0.04942113351705757
VGIVGFIKDVS	11	Unmodified	_VGIVGFIKDVS_					0	0	0			REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	REV__DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3307372927666	2	567.331882	1132.64921	3.5552	0.002017	-2.9346	-0.0016649	0.62061	0.00035209	567.3299581410433	73.791	1.1302	75.109	74.4	75.53	1.318					95	35	3	0	0	0	1.0084	1	30742	30742		3.2813	0.28607	1	4418700	+		36561	8451	18145	18223	42661	42661					0.0881915819995811
VGKAGDAS	8	Unmodified	_VGKAGDAS_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;INTS4-ALG8|4|fusion;INTS4-ALG8|3|fusion	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	704.3632079958916	1	704.357345	703.350068	1.4214	0.0010012	4.3283	0.0030486	5.7497	0.0040498	704.3618680992356	100.46	0.1206	100.46	100.38	100.51	0					5	3	2	0	0	0	0.89008	1	42062	42062		2.5775	0	1	1292000			36562	7658	18146	18224	42662	42662					-0.013472946419142318
VGKAGDAS	8	Unmodified	_VGKAGDAS_					0	0	0		INTS4-ALG8|2|fusion;INTS4-ALG8|1|fusion;nc|ENSG00000159063|Q9BVK2-2|ALG8;ENSG00000159063|ENST00000299626|ALG8;INTS4-ALG8|4|fusion;INTS4-ALG8|3|fusion	INTS4-ALG8|2|fusion	INTS4-ALG8|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	704.357345	703.350068	2.6975	0.0019	5.5119	0.0038823	8.2093	0.0057823	704.3609861692457	100.35	0.091293	100.42	100.38	100.47	0.072716	-0.017101	0.00018389	NaN	2.5775	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1391400			36563	7658	18146	18224							-0.013472946419142318
VGKAPALA	8	Unmodified	_VGKAPALA_					0	0	0		ENST00000521264.5_1_5:151125758-151125857:-|nuORF	ENST00000521264.5_1_5:151125758-151125857:-|nuORF	ENST00000521264.5_1_5:151125758-151125857:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	726.4543945193291	1	726.450851	725.443575	2.2227	0.0016147	-1.7361	-0.0012612	0.48656	0.00035347	726.449839160769	63.206	0.34921	63.206	63.017	63.366	0					17	10	2	0	0	0	0.89176	2	26328	26328;26381		0.79363	0	1	466480			36564	7082	18147	18225	42663;42664	42663					0.06987049531164757
VGKAPALA	8	Unmodified	_VGKAPALA_					0	0	0		ENST00000521264.5_1_5:151125758-151125857:-|nuORF	ENST00000521264.5_1_5:151125758-151125857:-|nuORF	ENST00000521264.5_1_5:151125758-151125857:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	726.450851	725.443575	1.8542	0.001347	1.3992	0.0010164	3.2533	0.0023634	726.4532414395902	63.024	0.25066	63.354	63.255	63.505	0.32974	0.074127	0.0015921	NaN	0.79363	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444910			36565	7082	18147	18225							0.06987049531164757
VGKCEPSWSK	10	Unmodified	_VGKCEPSWSK_					0	0	0			REV__ENST00000449852.1_1_10:79687146-79689388:+|nuORF	REV__ENST00000449852.1_1_10:79687146-79689388:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1008788943291	3	374.186703	1119.53828	-1.2895	-0.0004825	-1.6754	-0.00062691	-2.9649	-0.0011094	374.185977053798	23.491	0.27366	23.491	23.382	23.656	0					17	8	3	0	0	0	0.1256	1	9840	9840		0.69767	0.69767	1	1215200	+		36566	13126	18148	18226	42665	42665					-0.01670804779791979
VGKEATILI	9	Unmodified	_VGKEATILI_					0	0	0			REV__tr|A0A7D6VR05|A0A7D6VR05_9CLOTTranscriptionalregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00470PE=4SV=1	REV__tr|A0A7D6VR05|A0A7D6VR05_9CLOTTranscriptionalregulatoryproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2967712283134	2	472.294768	942.574983	2.5298	0.0011948	0.017756	8.386E-06	2.5476	0.0012032	472.29494320902904	42.3	0.33037	42.621	42.428	42.758	0.32058					24	10	3	0	0	0	0.49082	1	17818	17818		15.847	0	1	4309300	+		36567	15398	18149	18227	42666	42666					0.10139815108436778
VGKEEEEESH	10	Unmodified	_VGKEEEEESH_					0	0	0		ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	ENSG00000198746|ENST00000361720|GPATCH3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2842895388603	3	391.507047	1171.49931	0.14584	5.7098E-05	1.1005	0.00043084	1.2463	0.00048794	391.84265466027165	6.7693	0.12918	6.8493	6.7883	6.9175	0.079923					11	7	2	0	0	0	0.12559	1	2792	2792		0.77653	0	1	153680			36568	5075	18150	18228	42667	42667					-0.07957858600457257
VGKEILHN	8	Unmodified	_VGKEILHN_					0	0	0			REV__tr|A0A7D6W1Q0|A0A7D6W1Q0_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	REV__tr|A0A7D6W1Q0|A0A7D6W1Q0_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	455.2639648318291	2	455.261259	908.507966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.812	1	48.812	48.312	49.312	0								0	0	0	1.0178	1	20382	20382		0.79363	0	1		+		36569	15593	18151	18229	42668	42668					0.05005204617327763
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7802001833916	2	434.778754	867.542954	0.94576	0.0004112	3.0328	0.0013186	3.9786	0.0017298	434.78002743725807	19.269	0.85229	19.462	19.108	19.96	0.19342					60	27	3	0	0	0	0.89176	2	7889	7889;7930		0.79363	0	1	6100900	+		36570	12498	18152	18230	42669;42670	42669					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	434.8823425173759	2	434.778754	867.542954	0.84052	0.00036544	2.9107	0.0012655	3.7512	0.001631	434.7800614707551	17.195	0.34919	17.345	17.248	17.597	0.15093					20	13	2	0	0	0	2.3239	1	7231	7231		0.79363	0	1	883190	+		36571	12498	18152	18230	42671	42671					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7807189822197	2	434.778754	867.542954	0.7504	0.00032626	3.2215	0.0014006	3.9719	0.0017269	434.78010241906793	18.274	0.22161	19.253	19.147	19.369	0.97922					18	7	3	0	0	0	0.89176	1	7618	7618		0.79363	0	1	2176200	+		36572	12498	18152	18230	42672	42672					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7798950076103	2	434.778754	867.542954	0.78746	0.00034237	2.8386	0.0012342	3.6261	0.0015765	434.7799176886339	18.561	0.58862	19.54	19.369	19.957	0.97922					38	20	3	0	0	0	0.89176	1	7688	7688		0.79363	0	1	3122200	+		36573	12498	18152	18230	42673	42673					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7804748415947	2	434.778754	867.542954	1.3726	0.00059676	2.9465	0.0012811	4.3191	0.0018779	434.7800656124557	22.995	0.85819	24.21	23.799	24.657	1.2145					61	27	3	0	0	0	0.89176	1	9476	9476		0.79363	0	1	2997600	+		36574	12498	18152	18230	42674	42674					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.8828307986259	2	434.778754	867.542954	1.1425	0.00049674	1.2468	0.0005421	2.3894	0.0010388	434.7790835448415	21.242	0.68525	22.367	22.043	22.728	1.1254					40	22	2	0	0	0	2.3239	1	9000	9000		0.79363	0	1	2478500	+		36575	12498	18152	18230	42675	42675					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7796813845634	2	434.778754	867.542954	0.39773	0.00017293	2.6021	0.0011313	2.9998	0.0013043	434.7797302806244	17.771	0.21305	19.218	19.079	19.292	1.448					12	6	2	0	0	0	0.89176	1	7374	7374		0.79363	0	1	6545500	+		36576	12498	18152	18230	42676	42676					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7801086306572	2	434.778754	867.542954	0.40802	0.0001774	3.2358	0.0014069	3.6438	0.0015843	434.78004121388676	18.027	0.55276	19.475	19.265	19.817	1.448					35	18	4	0	0	0	0.89176	2	7449	7449;7495		0.79363	0	1	7330200	+		36577	12498	18152	18230	42677;42678	42677					0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	434.778754	867.542954	0.50783	0.00022079	3.1037	0.0013494	3.6116	0.0015702	434.7802577553744	16.421	0.37536	17.26	17.162	17.537	0.83969	-0.0081328	0.00016627	NaN	0.79363	22	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1011800	+		36578	12498	18152	18230							0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	434.778754	867.542954	0.7504	0.00032626	3.2215	0.0014006	3.9719	0.0017269	434.78010241906793	18.274	0.22161	19.253	19.147	19.369	0.97922	0.017221	0.0002394	NaN	0.79363	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2176200	+		36579	12498	18152	18230							0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	434.778754	867.542954	0.33362	0.00014505	2.6974	0.0011728	3.0311	0.0013178	434.7798276697997	16.16	0.34631	17.199	17.091	17.437	1.0392	-0.069034	-0.00018703	NaN	0.79363	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1158400	+		36580	12498	18152	18230							0.10388447425293634
VGKELLLP	8	Unmodified	_VGKELLLP_					0	0	0			REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	REV__ENST00000341259.6_1_12:111886343-111886586:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	434.778754	867.542954	0.39773	0.00017293	2.6021	0.0011313	2.9998	0.0013043	434.7797302806244	17.771	0.21305	19.218	19.079	19.292	1.448	-0.017221	-0.00029917	NaN	0.79363	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6545500	+		36581	12498	18152	18230							0.10388447425293634
VGKGAGQV	8	Unmodified	_VGKGAGQV_					0	0	0		ENST00000541337.5_1_5:139422034-139422808:-|nuORF	ENST00000541337.5_1_5:139422034-139422808:-|nuORF	ENST00000541337.5_1_5:139422034-139422808:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2073547244072	2	358.208495	714.402438	-0.10344	-3.7052E-05	-2.6894	-0.00096337	-2.7928	-0.0010004	358.2074555262364	17.106	0.26814	18.409	18.234	18.502	1.3023					11	8	2	0	0	0	0.89008	1	7122	7122		2.5775	0	1	311560			36582	7217	18153	18231	42679	42679					0.03381288491709711
VGKGGAGGK	9	Unmodified	_VGKGGAGGK_					0	0	0			REV__nc|ENSG00000150593|Q53EL6-2|PDCD4	REV__nc|ENSG00000150593|Q53EL6-2|PDCD4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	365.2105895876884	2	365.713945	729.413337	0.20685	7.5649E-05	-4.3777	-0.001601	-4.1708	-0.0015253	365.71284865279887	25.61	0.21587	26.87	26.771	26.987	1.2594					10	6	2	0	0	0	0.11908	1	10740	10740		0.52476	0.52476	1	275870	+		36583	10383	18154	18232	42680	42680					0.03780690865994529
VGKGKEIT	8	Unmodified	_VGKGKEIT_					0	0	0		ENST00000528263.1_1_12:122995684-122998331:-|nuORF	ENST00000528263.1_1_12:122995684-122998331:-|nuORF	ENST00000528263.1_1_12:122995684-122998331:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2500182986259	2	416.25036	830.486168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.574	1	33.852	33.352	34.352	1.2782								0	0	0	1.0178	1	13662	13662		0.79363	0	1				36584	7145	18155	18233	42681	42681					0.0641439986873138
VGKGQRGIIV	10	Unmodified	_VGKGQRGIIV_					0	0	0		tr|A0A7D6VNU9|A0A7D6VNU9_9CLOTTranscriptionterminationfactorRhoOS=ClostridiumintestinaleOX=36845GN=rhoPE=3SV=1	tr|A0A7D6VNU9|A0A7D6VNU9_9CLOTTranscriptionterminationfactorRhoOS=ClostridiumintestinaleOX=36845GN=rhoPE=3SV=1	tr|A0A7D6VNU9|A0A7D6VNU9_9CLOTTranscriptionterminationfactorRhoOS=ClostridiumintestinaleOX=36845GN=rhoPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8842346072197	3	342.885464	1025.63456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.178	1	10.256	9.7564	10.756	0.077971								0	0	0	0.66218	1	4220	4220		0.77653	0	1				36585	16746	18156	18234	42682	42682					0.12277130842448969
VGKGSLAN	8	Unmodified	_VGKGSLAN_					0	0	0			REV__tr|A0A553SIX0|A0A553SIX0_NIACIProteintranslocasesubunitSecAOS=NialliacirculansOX=1397GN=secAPE=3SV=1	REV__tr|A0A553SIX0|A0A553SIX0_NIACIProteintranslocasesubunitSecAOS=NialliacirculansOX=1397GN=secAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	745.4214965701103	1	745.420279	744.413003	2.1256	0.0015845	-1.6273	-0.001213	0.49834	0.00037147	745.4183586903849	63.817	0.39645	63.817	63.587	63.983	0					28	12	3	0	0	0	0.89176	2	26575	26575;26642		0.79363	0	1	2706100	+		36586	14870	18157	18235	42683;42684	42683					0.030572711461218205
VGKHESLII	9	Unmodified	_VGKHESLII_					0	0	0			REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.2976257205009	2	498.297842	994.581131	1.7711	0.00088252	-2.9849	-0.0014874	-1.2138	-0.00060485	498.2984529278307	45.867	0.24946	47.243	47.085	47.334	1.3751					11	7	2	0	0	0	0.53525	1	19241	19241		13.906	3.8321	1	515700	+		36587	10449	18158	18236	42685	42685					0.0836233333996006
VGKHESLII	9	Unmodified	_VGKHESLII_					0	0	0			REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	498.297842	994.581131	1.7711	0.00088252	-2.9849	-0.0014874	-1.2138	-0.00060485	498.2984529278307	45.867	0.24946	47.243	47.085	47.334	1.3751	-0.041318	-0.0010129	NaN	13.906	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	515700	+		36588	10449	18158	18236							0.0836233333996006
VGKHESLII	9	Unmodified	_VGKHESLII_					0	0	0			REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	REV__MERTK|p.D187Vfs*21|1|0.12|ENSG00000153208|chr2:111945036-111945037|-/TA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	498.297842	994.581131	1.4842	0.0007396	-1.6339	-0.00081416	-0.14965	-7.4568E-05	498.29784022056816	45.366	0.18772	47.325	47.176	47.364	1.9596	0.041318	0.00033348	NaN	13.906	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346800	+		36589	10449	18158	18236							0.0836233333996006
VGKHFWAF	8	Unmodified	_VGKHFWAF_					0	0	0		ENST00000493197.5_1_5:177638946-177656967:-|nuORF;ENST00000494126.6_1_5:177641847-177659033:-|nuORF;AFMID-AGXT2L2|1|fusion;ENSG00000175309|ENST00000308158|PHYKPL	ENST00000493197.5_1_5:177638946-177656967:-|nuORF	ENST00000493197.5_1_5:177638946-177656967:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2617065310478	2	496.261062	990.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.129	1	30.412	29.912	30.912	1.2825								0	0	0	1.0178	1	12217	12217		2.8892	0.31174	1				36590	26	18159	18237	42686	42686					0.011938296881226051
VGKHLTRRL	9	Unmodified	_VGKHLTRRL_					0	0	0			REV__ENST00000513116.1_1_1:26211808-26212198:-|nuORF	REV__ENST00000513116.1_1_1:26211808-26212198:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.0505248904228	3	360.564725	1078.67235	-1.6184	-0.00058354	-3.6858	-0.001329	-5.3042	-0.0019125	360.56353711622205	24.916	0.18536	24.916	24.765	24.95	0					7	5	2	0	0	0	0.11954	1	10361	10361		0	0	1	244420	+		36591	13585	18160	18238	42687	42687					0.1361564182791426
VGKHRRVH	8	Unmodified	_VGKHRRVH_					0	0	0			REV__ENST00000498342.5_1_1:6648784-6649012:+|nuORF	REV__ENST00000498342.5_1_1:6648784-6649012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.8004028201103	2	494.799209	987.583865	2.0147	0.00099686	-0.49142	-0.00024315	1.5232	0.0007537	494.79896396428256	89.52	0.47329	89.52	89.274	89.747	0					35	14	3	0	0	0	0.89178	1	37472	37472		0.69038	0	1	3413500	+		36592	11804	18161	18239	42688	42688					0.08957646308124367
VGKHRRVH	8	Unmodified	_VGKHRRVH_					0	0	0			REV__ENST00000498342.5_1_1:6648784-6649012:+|nuORF	REV__ENST00000498342.5_1_1:6648784-6649012:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.7993041872978	2	494.799209	987.583865	4.7029	0.002327	-1.9717	-0.0009756	2.7312	0.0013514	494.7983795631601	88.259	0.41308	89.706	89.54	89.953	1.4467					29	12	3	0	0	0	0.89176	1	37186	37186		0.79363	0.19213	1	2154900	+		36593	11804	18161	18239	42689	42689					0.08957646308124367
VGKILTTK	8	Unmodified	_VGKILTTK_					0	0	0			REV__tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	REV__tr|A0A7D7A6C8|A0A7D7A6C8_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10035PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	2	430.284203	858.553853	1.3081	0.00056286	-1.2881	-0.00055427	0.019974	8.5944E-06	430.283799627153	79.931	0.40451	81.648	81.413	81.817	1.7167					22	12	2	0	0	0	2.3239	1	33445	33445		0	0	1	1311200	+		36594	15891	18162	18240	42690	42690					0.11891849799542342
VGKISEKK	8	Unmodified	_VGKISEKK_					0	0	0			REV__MICU2|p.E424Q|1|0.07|ENSG00000165487|chr13:21493284-21493284|C/G|missense_variant	REV__MICU2|p.E424Q|1|0.07|ENSG00000165487|chr13:21493284-21493284|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1205932497978	2	444.779285	887.544017	2.602	0.0011573	-3.0473	-0.0013554	-0.44529	-0.00019806	444.7773149626173	72.916	0.22517	73.241	73.114	73.34	0.32494					9	6	2	0	0	0	2.3239	1	30488	30488		0	0	1	440410	+		36595	10782	18163	18241	42691	42691					0.09574661794181338
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.3062011599541	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.514	1	27.514	27.014	28.014	0								0	0	0	0.63775	1	11507	11507		0.094841	0.011491	1		+		36596	12904	18164	18242	42692	42692					0.27310751578238524
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3057128787041	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.867	1	12.561	12.061	13.061	0.69396								0	0	0	0.63775	1	4930	4930		0	0	1		+		36597	12904	18164	18242	42693	42693					0.27310751578238524
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3061401247978	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.977	1	12.671	12.171	13.171	0.69396								0	0	0	0.63775	1	4976	4976		0.094841	0	1		+		36598	12904	18164	18242	42694	42694					0.27310751578238524
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3064453005791	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.538	1	21.663	21.163	22.163	1.1254								0	0	0	0.63775	1	8560	8560		0.094841	0	1		+		36599	12904	18164	18242	42695	42695					0.27310751578238524
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3074828982353	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.236	1	94.108	93.608	94.608	0.87176								0	0	0	0.63775	1	39242	39242		0	0	1		+		36600	12904	18164	18242	42696	42696					0.27310751578238524
VGKKKKKKKKA	11	Unmodified	_VGKKKKKKKKA_					0	0	0			REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	REV__ENST00000406961.5_1_2:24991338-24991476:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	424.3070861697197	3	424.306363	1269.89726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.67	1	104.83	104.33	105.33	0.16055								0	0	0	0.63775	1	44402	44402		0	0	1		+		36601	12904	18164	18242	42697	42697					0.27310751578238524
VGKKQPALDVL	11	Unmodified	_VGKKQPALDVL_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3567382693291	2	584.358431	1166.70231	1.7917	0.001047	-2.8624	-0.0016727	-1.0707	-0.00062568	584.3565666148345	72.795	1.6696	72.795	71.764	73.433	0					67	52	2	0	0	0	1.0362	1	30379	30379		1.3295	0.13619	1	1868000			36602	1602	18165	18243	42698	42698					0.12562535982578993
VGKKQRPGR	9	Unmodified	_VGKKQRPGR_					0	0	0		ENST00000296277.8_1_3:186839062-186857041:-|nuORF	ENST00000296277.8_1_3:186839062-186857041:-|nuORF	ENST00000296277.8_1_3:186839062-186857041:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.1991454958916	3	342.549075	1024.6254	0.2186	7.4881E-05	-2.9568	-0.0010128	-2.7382	-0.00093796	342.5482558250023	21.693	0.36118	21.916	21.78	22.142	0.223					16	11	2	0	0	0	0.11909	1	9101	9101		2.4985	0	1	768640			36603	5732	18166	18244	42699	42699					0.11406782276776539
VGKKRKSIFIL	11	Unmodified	_VGKKRKSIFIL_					0	0	0		HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|164|2|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|164|2|anti-sense	HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|164|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	323.1118957400322	4	322.967046	1287.83908	-0.10951	-3.537E-05	2.5882	0.0008359	2.4787	0.00080053	322.9678183601792	22.574	0.20471	24.225	24.109	24.314	1.6511					8	6	2	0	0	0	0.14606	1	9388	9388		0	0	1	131210			36604	7640	18167	18245	42700	42700					0.20667069932983395
VGKKTLLCV	9	Unmodified	_VGKKTLLCV_					0	0	0			REV__TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant	REV__TANC1|p.T1589Ifs*85|1|0.16|ENSG00000115183|chr2:159230192-159230192|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	960.5936767458916	1	960.59105	959.583773	1.7073	0.00164	-0.065673	-6.3085E-05	1.6417	0.001577	960.5908157294384	79.025	0.45103	79.025	78.724	79.175	0					32	14	3	0	0	0	0.64949	1	32876	32876		9.3474	2.9933	1	3414800	+		36605	9428	18168	18246	42701	42701					0.10236465473246881
VGKLASPSAAP	11	Unmodified	_VGKLASPSAAP_					0	0	0			REV__ENSG00000167513|ENST00000301019|CDT1	REV__ENSG00000167513|ENST00000301019|CDT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.2895690798759	2	499.287474	996.560395	1.5014	0.00074963	3.1555	0.0015755	4.6569	0.0023251	499.28942554943853	48.413	0.18248	49.801	49.681	49.864	1.388					8	5	2	0	0	0	0.96769	1	20268	20268		5.7319	0.50118	1	491870	+		36606	10866	18169	18247	42702	42702					0.061977429602734446
VGKLLIIASIS	11	Unmodified	_VGKLLIIASIS_					0	0	0		chr5:124062510-124213455|90|11.21|0.0|12.03|-|1|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|39	chr5:124062510-124213455|90|11.21|0.0|12.03|-|1|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|39	chr5:124062510-124213455|90|11.21|0.0|12.03|-|1|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|39	MSMS	GG20161007_CRH_Patient100_W632_02	4	557.3694946169853	2	557.365724	1112.7169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.76	1	102.94	102.44	103.44	0.18066								0	0	0	0.63775	1	43241	43241		1.3295	0.63916	1				36607	266	18170	18248	42703	42703					0.16504608130753695
VGKLMWYDSH	10	Unmodified	_VGKLMWYDSH_					0	0	0			REV__tr|A0A7D6VUW8|A0A7D6VUW8_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08660PE=3SV=1	REV__tr|A0A7D6VUW8|A0A7D6VUW8_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08660PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.5336791872978	3	412.534103	1234.58048	-0.57303	-0.0002364	-1.2322	-0.00050831	-1.8052	-0.0007447	412.53360158032376	15.107	0.15742	15.107	15.028	15.186	0					6	4	2	0	0	0	0.89422	1	6283	6283		2.086	0.63089	1	323260	+		36608	15520	18171	18249	42704	42704					-0.02742829371436528
VGKLNEYRRF	10	Unmodified	_VGKLNEYRRF_					0	0	0			REV__nc|ENSG00000147526|O75410-3|TACC1	REV__nc|ENSG00000147526|O75410-3|TACC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	641.3569213747978	2	641.356754	1280.69895	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.44	1	89.44	88.94	89.94	0								0	0	0	0.66185	1	37386	37386		1.3295	0	1		+		36609	10327	18172	18250	42705	42705					0.06983285928595251
VGKLRLTHI	9	Unmodified	_VGKLRLTHI_					0	0	0			REV__nc|ENSG00000154358|Q5VST9|OBSCN	REV__nc|ENSG00000154358|Q5VST9|OBSCN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1412231326103	2	518.834926	1035.6553	4.3553	0.0022597	-3.319	-0.001722	1.0363	0.00053769	518.8332704143005	92.941	0.52292	93.813	93.605	94.128	0.87176					21	15	2	0	0	0	0.11812	1	39215	39215		4.756	1.8668	1	448980	+		36610	10474	18173	18251	42706	42706					0.13889721222108165
VGKLRVFVK	9	Unmodified	_VGKLRVFVK_					0	0	0		ENSG00000198759|ENST00000361306|EGFL6;nc|ENSG00000198759|Q8IUX8-2|EGFL6	ENSG00000198759|ENST00000361306|EGFL6	ENSG00000198759|ENST00000361306|EGFL6	MSMS	GG20161007_CRH_Patient100_A02_02	2	349.2351562380791	3	349.234205	1044.68079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.17	1	58.493	57.993	58.993	0.32298								0	0	0	0.42693	1	24383	24383		2.7352	2.2769	1				36611	5078	18174	18252	42707	42707					0.16023195744537588
VGKLSTNA	8	Unmodified	_VGKLSTNA_					0	0	0			REV__tr|A0A553SIT9|A0A553SIT9_NIACIPA14domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15490PE=4SV=1	REV__tr|A0A553SIT9|A0A553SIT9_NIACIPA14domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15490PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	789.4471923708916	1	789.446494	788.439217	1.8105	0.0014293	-3.4401	-0.0027158	-1.6296	-0.0012865	789.4444360682304	67.11	0.34105	67.432	67.188	67.529	0.32269					15	11	2	0	0	0	0.89176	1	28103	28103		0.79363	0	1	932690	+		36612	14867	18175	18253	42708	42708					0.036535403176003456
VGKLYGIRDVR	11	Unmodified	_VGKLYGIRDVR_					0	0	0		ENSG00000138615|ENST00000261883|CILP	ENSG00000138615|ENST00000261883|CILP	ENSG00000138615|ENST00000261883|CILP	MSMS	GG20161007_CRH_Patient100_A02_02	2	638.3824951052666	2	638.380229	1274.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.561	1	95.685	95.185	96.185	0.12331								0	0	0	0.63775	1	39988	39988		1.1933	0.66858	1				36613	2840	18176	18254	42709	42709					0.11952145479745013
VGKPLLVSV	9	Unmodified	_VGKPLLVSV_					0	0	0		ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	ENST00000430298.6_1_19:12222513-12222840:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5356323122978	3	304.535661	910.585153	-0.34553	-0.00010523	1.9601	0.00059691	1.6145	0.00049168	304.53621774720295	18.041	0.97282	19.489	19.175	20.147	1.448					91	32	4	0	0	0	0.83753	1	7524	7524		0.96228	0.69326	1	16690000			36614	6497	18177	18255	42710	42710					0.1262842283365444
VGKPSHPSE	9	Unmodified	_VGKPSHPSE_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_02	4	469.2415954470634	2	469.240524	936.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.139	1	22.713	22.213	23.213	1.5748								0	0	0	0.42693	1	8806	8806		2.0598	0	1				36615	3425;7900	18178	18256	42711	42711					-0.004279761419979877
VGKPWRLGR	9	Unmodified	_VGKPWRLGR_					0	0	0		ENST00000574946.5_1_17:6025924-6026050:+|nuORF	ENST00000574946.5_1_17:6025924-6026050:+|nuORF	ENST00000574946.5_1_17:6025924-6026050:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	356.0545226931572	3	356.885687	1067.63523	-0.32271	-0.00011517	0.38706	0.00013814	0.064348	2.2965E-05	356.88545240341153	29.203	0.15072	30.486	30.404	30.554	1.2825					6	4	2	0	0	0	0.11954	1	12277	12277		0	0	1	259730			36616	7406	18179	18257	42712	42712					0.10411970282189031
VGKRFREHF	9	Unmodified	_VGKRFREHF_					0	0	0		MAGEB2|p.L208Tfs*21|1|0.12|ENSG00000099399|chrX:30219200-30219201|-/CACTGAAGCAGAGGAAGAAGAGGCC|frameshift_variant;ENSG00000099399|ENST00000378988|MAGEB2	MAGEB2|p.L208Tfs*21|1|0.12|ENSG00000099399|chrX:30219200-30219201|-/CACTGAAGCAGAGGAAGAAGAGGCC|frameshift_variant	MAGEB2|p.L208Tfs*21|1|0.12|ENSG00000099399|chrX:30219200-30219201|-/CACTGAAGCAGAGGAAGAAGAGGCC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3271972537041	2	588.325257	1174.63596	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.388	1	41.705	41.205	42.205	0.31683								0	0	0	0.42693	1	17386	17386		0.6015	0	1				36617	1210	18180	18258	42713	42713					0.0556276493121004
VGKRHVTS	8	Unmodified	_VGKRHVTS_					0	0	0		chr1:103745515-103750424|261|25.86|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43;chr1:103745227-103750424|224|26.5|0.0|21.34|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745227|None,AMY1C|43;chr1:103651377-103750424|201|17.3|0.0|20.72|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651377|None,AMY1C|43;chr1:103651250-103750424|173|10.4|0.0|19.99|+|2|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651250|None,AMY1C|43;chr1:103651089-103750424|169|18.98|0.0|20.86|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup2,ERV1,LTR,donor,-,103648516,103651089|None,AMY1C|43	chr1:103745515-103750424|261|25.86|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43	chr1:103745515-103750424|261|25.86|0.0|21.3|+|1|TE_info:HERVE_a-int,HERVE_a-int_dup8,ERV1,LTR,donor,-,103742654,103745515|None,AMY1C|43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	442.3178588747978	2	442.259051	882.503549	2.9409	0.0013006	2.2797	0.0010082	5.2206	0.0023089	442.2595155296108	84.155	1.0183	84.416	84.186	85.204	0.26083					50	31	3	0	0	0	2.3239	1	35363	35363		0.69038	0	1	2720800			36618	156	18181	18259	42714	42714					0.05759740194423557
VGKRIMKN	8	Unmodified	_VGKRIMKN_					0	0	0			REV__ENSG00000112739|ENST00000337659|PRPF4B	REV__ENSG00000112739|ENST00000337659|PRPF4B	MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2873412966728	2	473.286754	944.558955	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.973	1	41.29	40.79	41.79	0.31683								0	0	0	1.0178	1	17219	17219		0.79363	0	1		+		36619	9367	18182	18260	42715	42715					0.08445830390530773
VGKSRTRHRKE	11	Unmodified	_VGKSRTRHRKE_					0	0	0			REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3961669802666	2	677.394733	1352.77491	2.3374	0.0015833	-1.3101	-0.00088747	1.0273	0.00069587	677.393399060344	82.17	0.63833	82.17	81.854	82.493	0					36	20	2	0	0	0	1.0393	1	34267	34267		0.35063	0	1	1352300	+		36620	11503	18183	18261	42716	42716					0.11263682828735
VGKSRTRHRKE	11	Unmodified	_VGKSRTRHRKE_					0	0	0			REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3960449099541	2	677.394733	1352.77491	2.4756	0.001677	0.26224	0.00017764	2.7378	0.0018546	677.3949411725933	83.276	1.3837	83.276	82.493	83.876	0					99	44	3	0	0	0	1.0393	1	34484	34484		0.35063	0	1	1972200	+		36621	11503	18183	18261	42717	42717					0.11263682828735
VGKSRTRHRKE	11	Unmodified	_VGKSRTRHRKE_					0	0	0			REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	REV__nc|ENSG00000186487|Q9UL68-4|MYT1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.3936035037041	2	677.394733	1352.77491	2.5056	0.0016973	-0.74147	-0.00050227	1.7641	0.001195	677.3942794699842	85.883	0.75523	86.135	85.943	86.699	0.25227					42	24	2	0	0	0	1.0393	1	36045	36045		0.35063	0	1	2135800	+		36622	11503	18183	18261	42718	42718					0.11263682828735
VGKSSSRV	8	Unmodified	_VGKSSSRV_					0	0	0		ENST00000374825.8_1_6:32939382-32940003:+|nuORF	ENST00000374825.8_1_6:32939382-32940003:+|nuORF	ENST00000374825.8_1_6:32939382-32940003:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2399780154228	2	410.237784	818.461016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.996	1	93.323	92.823	93.823	1.3269								0	0	0	1.0178	1	38733	38733		2.8892	0.31174	1				36623	6178	18184	18262	42719	42719					0.0445234506619272
VGKTPPLFFFL	11	Unmodified	_VGKTPPLFFFL_					0	0	0			REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3715087771416	2	633.368267	1264.72198	2.1393	0.001355	2.0679	0.0013098	4.2072	0.0026647	633.3694890417619	80.137	0.77713	80.137	79.795	80.572	0					49	24	3	0	0	0	1.0357	1	33359	33359		1.4819	0	1	1434600	+		36624	12184	18185	18263	42720	42720					0.10020911993365189
VGKTPPLFFFL	11	Unmodified	_VGKTPPLFFFL_					0	0	0			REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	REV__ENST00000261254.7_1_12:4412550-4412766:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3728515505791	2	633.368267	1264.72198	1.6313	0.0010332	2.0474	0.0012967	3.6786	0.0023299	633.369142933459	79.157	1.5931	79.458	78.444	80.037	0.30047					112	50	3	0	0	0	1.0357	1	33250	33250		1.4819	0.15237	1	3402400	+		36625	12184	18185	18263	42721	42721					0.10020911993365189
VGKVLLVPG	9	Unmodified	_VGKVLLVPG_					0	0	0		nc|ENSG00000108828|Q99536-2|VAT1;nc|ENSG00000108828|Q99536-3|VAT1;ENSG00000108828|ENST00000355653|VAT1	nc|ENSG00000108828|Q99536-2|VAT1	nc|ENSG00000108828|Q99536-2|VAT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	441.2950622439384	2	441.294571	880.574589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.755	1	35.755	35.255	36.255	0								0	0	0	0.42693	1	14989	14989		0.6015	0	1				36626	1648	18186	18264	42722	42722					0.1295244017924233
VGKVMIAKH	9	Unmodified	_VGKVMIAKH_					0	0	0			REV__ENST00000468639.5_1_9:75766818-75774345:+|nuORF	REV__ENST00000468639.5_1_9:75766818-75774345:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	492.3029968142509	2	491.796955	981.579357	1.9852	0.00097631	-1.5747	-0.00077441	0.41053	0.0002019	491.79585582033076	33.321	0.5457	33.618	33.307	33.853	0.29701					37	17	3	0	0	0	0.11946	1	14087	14087		0.6015	0	1	2919700	+		36627	9926	18187	18265	42723	42723					0.08783001050335315
VGKVPGVV	8	Unmodified	_VGKVPGVV_					0	0	0			REV__nc|ENSG00000170322|Q6P4R8-3|NFRKB	REV__nc|ENSG00000170322|Q6P4R8-3|NFRKB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.2399169802666	2	377.744714	753.474875	0.93717	0.00035401	0.83781	0.00031648	1.775	0.00067049	377.74595472931	67.145	0.73386	69.034	68.616	69.35	1.8889					50	23	4	0	0	0	0.89176	2	28088	28088;28162		0.79363	0	1	5654900	+		36628	10980	18188	18266	42724;42725	42724					0.0882762256528622
VGKVPLCFV	9	Unmodified	_VGKVPLCFV_					0	0	0		nc|ENSG00000119684|Q9UHC1-2|MLH3;ENSG00000119684|ENST00000355774|MLH3	nc|ENSG00000119684|Q9UHC1-2|MLH3	nc|ENSG00000119684|Q9UHC1-2|MLH3	MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2841674685478	2	481.280606	960.546659	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.745	1	89.968	89.468	90.468	0.22359								0	0	0	0.42693	1	37611	37611		2.3027	1.5091	1				36629	2079	18189	18267	42726	42726					0.06480793927494233
VGKVTVTAVLH	11	Unmodified	_VGKVTVTAVLH_					0	0	0			REV__ENSG00000132182|ENST00000254508|NUP210	REV__ENSG00000132182|ENST00000254508|NUP210	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3446533083916	2	562.345323	1122.67609	1.2972	0.0007295	-2.4132	-0.0013571	-1.116	-0.00062757	562.3437509389993	72.739	1.9379	72.739	71.796	73.734	0					149	61	3	0	0	0	1.0031	1	29952	29952		3.5965	1.2938	1	3980400	+		36630	9838	18190	18268	42727	42727					0.11966266811123205
VGLAAQPV	8	Unmodified	_VGLAAQPV_					0	0	0			REV__DBNDD1|p.P26A|1|0.27|ENSG00000003249|chr16:90009386-90009386|G/C|missense_variant	REV__DBNDD1|p.P26A|1|0.27|ENSG00000003249|chr16:90009386-90009386|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4449951052666	1	754.445766	753.438489	2.0633	0.0015567	-2.5101	-0.0018938	-0.44682	-0.0003371	754.4437780332352	64.138	0.37337	65.546	65.336	65.71	1.4071					25	11	3	0	0	0	0.88958	1	26880	26880		2.8892	0	1	3105500	+		36631	8423	18191	18269	42728	42728					0.05190745668562613
VGLARAHF	8	Unmodified	_VGLARAHF_					0	0	0		ENST00000609967.5_1_20:2674291-2732741:+|nuORF;nc|ENSG00000108001|Q9H4W6-2|EBF3;nc|ENSG00000164330|Q9UH73-2|EBF1;ENST00000518836.5_1_5:158126121-158526593:-|nuORF;ENSG00000164330|ENST00000313708|EBF1;nc|ENSG00000108001|Q9H4W6|EBF3;ENSG00000088881|ENST00000609451|EBF4;ENSG00000108001|ENST00000440978|EBF3;nc|ENSG00000088881|Q9BQW3-1|EBF4	ENST00000609967.5_1_20:2674291-2732741:+|nuORF	ENST00000609967.5_1_20:2674291-2732741:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7522155642509	2	435.750862	869.487171	1.4128	0.00061564	2.5937	0.0011302	4.0066	0.0017459	435.751903025503	64.36	0.73857	64.36	63.983	64.722	0					51	22	3	0	0	0	0.89008	1	26925	26925		2.5775	0	1	3672300			36632	1110	18192	18270	42729	42729					0.047206590283167316
VGLAVPILS	9	Unmodified	_VGLAVPILS_					0	0	0		USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant;nc|ENSG00000154914|Q70EL4-4|USP43;ENSG00000154914|ENST00000285199|USP43	USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	USP43|p.P814Sfs*46|1|0.22|ENSG00000154914|chr17:9728057-9728058|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7802001833916	2	434.778754	867.542954	0.94576	0.0004112	3.0328	0.0013186	3.9786	0.0017298	434.78002743725807	19.269	0.85229	19.462	19.108	19.96	0.19342					60	27	3	0	0	0	0.83213	1	7982	7982		2.0598	0	1	6100900			36633	3402	18193	18271	42730	42730					0.10388447425293634
VGLCLFPIKYL	11	Unmodified	_VGLCLFPIKYL_					0	0	0		ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3725463747978	2	633.369952	1264.72535	2.3357	0.0014794	-2.0506	-0.0012988	0.28515	0.00018061	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	1.0357	1	33660	33660		1.4819	0.15237	1	11549000			36634	5795	18194	18272	42731	42731					0.1035783877571248
VGLCLFPIKYL	11	Unmodified	_VGLCLFPIKYL_					0	0	0		ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3701660037041	2	633.369952	1264.72535	1.7557	0.001112	-0.40006	-0.00025339	1.3556	0.00085861	633.3694671456946	80.035	0.81465	80.335	80.004	80.819	0.30047					43	25	3	0	0	0	1.0357	1	33338	33338		1.4819	0	1	694730			36635	5795	18194	18272	42732	42732					0.1035783877571248
VGLCLFPIKYL	11	Unmodified	_VGLCLFPIKYL_					0	0	0		ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3733398318291	2	633.369952	1264.72535	2.4867	0.001575	-0.41996	-0.00026599	2.0667	0.001309	633.3693862772386	79.1	0.68482	80.367	80.13	80.815	1.2668					32	21	2	0	0	0	0.95124	1	33303	33303		6.7232	0	1	879850			36636	5795	18194	18272	42733	42733					0.1035783877571248
VGLCLFPIKYL	11	Unmodified	_VGLCLFPIKYL_					0	0	0		ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3726684451103	2	633.369952	1264.72535	2.4138	0.0015288	-1.1635	-0.0007369	1.2504	0.00079194	633.3690434173299	80.495	1.7494	81.746	80.955	82.705	1.2512					154	56	5	0	0	0	1.0031	1	33531	33531		3.5965	0	1	8479200			36637	5795	18194	18272	42734	42734					0.1035783877571248
VGLCLFPIKYL	11	Unmodified	_VGLCLFPIKYL_					0	0	0		ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	ENST00000309922.6_1_3:101284860-101285061:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.3693115115166	2	633.369952	1264.72535	1.0752	0.000681	-0.84129	-0.00053285	0.23391	0.00014815	633.3693581839366	80.218	1.8062	81.935	81.137	82.943	1.7167					147	58	3	0	0	0	1.0031	3	33353	33353;33401;33452		3.5965	0.8613	1	5927400			36638	5795	18194	18272	42735;42736;42737	42735					0.1035783877571248
VGLDKAYSVVF	11	Unmodified	_VGLDKAYSVVF_					0	0	0			REV__ENSG00000141526|ENST00000582743|SLC16A3	REV__ENSG00000141526|ENST00000582743|SLC16A3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2508422732353	3	399.888651	1196.64412	0.413	0.00016516	1.5268	0.00061054	1.9398	0.00077569	399.88923132118384	29.589	0.85798	30.871	30.674	31.532	1.2825					51	27	2	0	0	0	0.14606	1	12346	12346		0.094841	0	1	1543400	+		36639	10155	18195	18273	42738	42738					0.05366854337307814
VGLDTDSRHYK	11	Unmodified	_VGLDTDSRHYK_					0	0	0		TRAPPC9-PTK2|2|fusion;TRAPPC9-PTK2|1|fusion;TRAPPC9-PTK2|4|fusion;TRAPPC9-PTK2|3|fusion;nc|ENSG00000167632|Q96Q05-3|TRAPPC9;ENSG00000167632|ENST00000438773|TRAPPC9;EIF2C2-TRAPPC9|3|fusion;nc|ENSG00000167632|Q96Q05-2|TRAPPC9	TRAPPC9-PTK2|2|fusion	TRAPPC9-PTK2|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8878967165947	3	430.886081	1289.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.485	1	11.243	10.743	11.743	0.75775								0	0	0	0.63775	1	4360	4360		0.50596	0.34663	1				36640	444	18196	18274	42739	42739					0.0031809506976969715
VGLDTITVK	9	Unmodified	_VGLDTITVK_					0	0	0			REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.2829772830009	2	473.2844	944.554247	2.5573	0.0012103	-0.91448	-0.00043281	1.6428	0.00077752	473.2835848929839	53.316	0.21925	53.639	53.475	53.694	0.32283					9	6	2	0	0	0	0.25667	1	22346	22346		27.629	0	1	479880	+		36641	10408	18197	18275	42740	42740					0.07975224728750163
VGLDTITVK	9	Unmodified	_VGLDTITVK_					0	0	0			REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	REV__TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	473.2809326052666	2	473.2844	944.554247	0.90038	0.00042613	-1.1578	-0.00054796	-0.25741	-0.00012183	473.2832300746624	51.567	0.28149	53.543	53.398	53.679	1.9751					13	8	2	0	0	0	0.37774	1	21646	21646		21.537	0	1	1047800	+		36642	10408	18197	18275	42741	42741					0.07975224728750163
VGLDVLRK	8	Unmodified	_VGLDVLRK_					0	0	0			REV__tr|A0A553SQE7|A0A553SQE7_NIACIMonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_07060PE=4SV=1	REV__tr|A0A553SQE7|A0A553SQE7_NIACIMonooxygenaseOS=NialliacirculansOX=1397GN=CEQ21_07060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1281616091728	3	300.527277	898.560001	0.069479	2.088E-05	-0.23293	-7.0001E-05	-0.16345	-4.912E-05	300.52702147907326	23.789	0.36992	25.03	24.805	25.175	1.241					15	11	2	0	0	0	2.3239	1	9925	9925		3.9444	0	1	202360	+		36643	15129	18198	18276	42742	42742					0.10666368031081674
VGLEFMMVMFV	11	Unmodified	_VGLEFMMVMFV_					0	0	0		tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825256228447	3	434.881346	1301.62221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.36	1	18.533	18.033	19.033	0.17285								0	0	0	0.63775	1	7621	7621		0.50596	0	1				36644	17286	18199	18277	42743	42743					-0.016537329987613703
VGLEFMMVMFV	11	Unmodified	_VGLEFMMVMFV_					0	0	0		tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8827697634697	3	434.881346	1301.62221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.921	1	19.98	19.48	20.48	1.0585								0	0	0	0.63775	1	7885	7885		0.50596	0.23694	1				36645	17286	18199	18277	42744	42744					-0.016537329987613703
VGLEFMMVMFV	11	Unmodified	_VGLEFMMVMFV_					0	0	0		tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	tr|A0A7D7A4F6|A0A7D7A4F6_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827697634697	3	434.881346	1301.62221	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.709	1	20.157	19.657	20.657	1.448								0	0	0	0.63775	1	7780	7780		0.50596	0.34663	1				36646	17286	18199	18277	42745	42745					-0.016537329987613703
VGLELHSKKI	10	Unmodified	_VGLELHSKKI_					0	0	0			REV__DLG5|p.Q1509H|1|0.08|ENSG00000151208|chr10:77809667-77809667|C/A|missense_variant	REV__DLG5|p.Q1509H|1|0.08|ENSG00000151208|chr10:77809667-77809667|C/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3437377810478	2	562.345323	1122.67609	1.8702	0.0010517	-2.84	-0.001597	-0.96977	-0.00054535	562.3434102989761	71.487	0.65022	72.828	72.629	73.279	1.3415					48	20	3	0	0	0	0.846	1	30061	30061		7.2892	2.0586	1	6828900	+		36647	8446	18200	18278	42746	42746					0.11966266811123205
VGLFFPDRDQP	11	Unmodified	_VGLFFPDRDQP_					0	0	0			REV__ENST00000307403.6_1_7:155500050-155531112:+|nuORF	REV__ENST00000307403.6_1_7:155500050-155531112:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889953494072	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.034	1	21.093	20.593	21.593	1.0585								0	0	0	0.63775	1	8341	8341		0.50596	0.09769	1		+		36648	11431	18201	18279	42747	42747					0.007201845634881465
VGLFFPDRDQP	11	Unmodified	_VGLFFPDRDQP_					0	0	0			REV__ENST00000307403.6_1_7:155500050-155531112:+|nuORF	REV__ENST00000307403.6_1_7:155500050-155531112:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887817263603	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.799	1	21.323	20.823	21.823	1.5237								0	0	0	0.63775	1	8229	8229		0.50596	0.27011	1		+		36649	11431	18201	18279	42748	42748					0.007201845634881465
VGLFFRVF	8	Unmodified	_VGLFFRVF_					0	0	0		ENST00000371335.4_1_X:119571204-119571369:-|nuORF	ENST00000371335.4_1_X:119571204-119571369:-|nuORF	ENST00000371335.4_1_X:119571204-119571369:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0054199099541	3	328.860367	983.559273	-0.041602	-1.3681E-05	-2.6495	-0.00087131	-2.6911	-0.00088499	328.8599722247136	23.005	0.12519	24.656	24.56	24.686	1.6511					5	3	2	0	0	0	2.3239	1	9580	9580		0.45834	0	1	86896			36650	6125	18202	18280	42749	42749					0.06683573382042596
VGLFISTNA	9	Unmodified	_VGLFISTNA_					0	0	0			REV__tr|A0A7D6VTQ6|A0A7D6VTQ6_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_22170PE=4SV=1	REV__tr|A0A7D6VTQ6|A0A7D6VTQ6_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_22170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	921.5046874880791	1	921.504009	920.496732	2.8068	0.0025865	-3.2244	-0.0029713	-0.41762	-0.00038484	921.5012307376159	103.65	0.11031	103.71	103.64	103.75	0.059502					12	5	3	0	0	0	0.77526	1	43536	43536		4.3292	0.73274	1	15033000	+		36651	15497	18203	18281	42750	42750					0.033303825231769224
VGLFRMGLW	9	Unmodified	_VGLFRMGLW_					0	0	0		nc|ENSG00000103502|O14735-3|CDIPT;ENSG00000103502|ENST00000219789|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2010070681572	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.983	1	13.811	13.311	14.311	0.82789								0	0	0	0.42693	1	5384	5384		1.1933	0	1				36652	1433	18204	18282	42751	42751					0.04367001050354702
VGLFRVLRR	9	Unmodified	_VGLFRVLRR_					0	0	0			REV__nc|ENSG00000105520|Q96GM1|PLPPR2	REV__nc|ENSG00000105520|Q96GM1|PLPPR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	373.0997192263603	3	372.576854	1114.70873	1.6826	0.00062689	-1.0717	-0.00039931	0.61083	0.00022758	372.910571060424	45.005	0.63365	46.37	45.962	46.596	1.3653					33	19	2	0	0	0	0.11954	1	18727	18727		0.26902	0	1	1992600	+		36653	9181	18205	18283	42752	42752					0.15596518724646558
VGLGALGV	8	Unmodified	_VGLGALGV_					0	0	0		ENST00000491557.2_1_10:77163559-77163751:+|nuORF;ENST00000427497.3_1_17:17135133-17140372:-|nuORF	ENST00000491557.2_1_10:77163559-77163751:+|nuORF	ENST00000491557.2_1_10:77163559-77163751:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	343.5343810915947	2	343.215789	684.417025	0.1018	3.4938E-05	3.5868	0.001231	3.6886	0.001266	343.21704396077826	24.176	0.45091	25.86	25.692	26.143	1.6845					24	14	2	0	0	0	2.3239	1	10185	10185		0.79363	0	1	890450			36654	6477	18206	18284	42753	42753					0.0621936063986368
VGLGALGV	8	Unmodified	_VGLGALGV_					0	0	0		ENST00000491557.2_1_10:77163559-77163751:+|nuORF;ENST00000427497.3_1_17:17135133-17140372:-|nuORF	ENST00000491557.2_1_10:77163559-77163751:+|nuORF	ENST00000491557.2_1_10:77163559-77163751:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	343.215789	684.417025	0.14345	4.9235E-05	3.6555	0.0012546	3.799	0.0013039	343.2169770700197	24.538	0.50993	25.779	25.609	26.119	1.241	-0.040554	2.2148E-05	NaN	0.79363	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1318000			36655	6477	18206	18284							0.0621936063986368
VGLGDAAHTGA	11	Unmodified	_VGLGDAAHTGA_					0	0	0		tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	tr|A0A553SQ44|A0A553SQ44_NIACIDUF2953domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_17705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7434265017509	2	484.743431	967.472308	0.53852	0.00026105	-0.29	-0.00014058	0.24852	0.00012047	484.7435317598103	25.072	0.27159	26.788	26.635	26.907	1.7167					19	8	3	0	0	0	1.0362	1	10513	10513		1.3295	0.5359	1	1387400			36656	16499	18207	18285	42754	42754					-0.012728776303333689
VGLGEPSG	8	Unmodified	_VGLGEPSG_					0	0	0			REV__ENST00000591326.5_1_19:2085254-2090096:-|nuORF	REV__ENST00000591326.5_1_19:2085254-2090096:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	358.2057372927666	2	358.184686	714.354819	0.091895	3.2916E-05	2.6254	0.00094039	2.7173	0.00097331	358.18570815496656	21.911	0.27258	23.527	23.401	23.674	1.6158					12	8	2	0	0	0	2.3239	1	9091	9091		0.79363	0	1	198740	+		36657	12558	18208	18286	42755	42755					-0.013784104991259483
VGLGGRERL	9	Unmodified	_VGLGGRERL_					0	0	0			REV__ENST00000420343.1_1_5:156569472-156569760:-|nuORF	REV__ENST00000420343.1_1_5:156569472-156569760:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.7867004275322	2	478.785433	955.556313	2.7409	0.0013123	0.18767	8.9854E-05	2.9285	0.0014021	478.78536230666595	73.481	0.52819	75.277	75.039	75.567	1.7962					37	16	3	0	0	0	0.82604	1	30852	30852		2.3027	0	1	3940200	+		36658	12973	18209	18287	42756	42756					0.07675698257230579
VGLGLRPFLCK	11	Unmodified	_VGLGLRPFLCK_					0	0	0			REV__ENST00000429967.2_1_X:128780792-128781152:-|nuORF	REV__ENST00000429967.2_1_X:128780792-128781152:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8612548708916	2	601.857544	1201.70053	5.112	0.0030767	0.36874	0.00022193	5.4808	0.0032986	601.8577209552213	89.654	0.33846	90.674	90.461	90.8	1.0199					17	10	2	0	0	0	1.0084	1	37762	37762		3.2813	1.2216	1	1449200	+		36659	13019	18210	18288	42757	42757					0.10775203693015101
VGLGPAGRLLG	11	Unmodified	_VGLGPAGRLLG_					0	0	0			REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	REV__PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3127929568291	2	505.311284	1008.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.058	1	33.883	33.383	34.383	1.8246								0	0	0	0.63775	1	13438	13438		1.3295	0.63916	1		+		36660	9807	18211	18289	42758	42758					0.10405441951149896
VGLGPFKV	8	Unmodified	_VGLGPFKV_					0	0	0		tr|A0A553SFK9|A0A553SFK9_NIACIOligopeptideABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09100PE=4SV=1	tr|A0A553SFK9|A0A553SFK9_NIACIOligopeptideABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09100PE=4SV=1	tr|A0A553SFK9|A0A553SFK9_NIACIOligopeptideABCtransportersubstrate-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_09100PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	409.2977783083916	2	408.752539	815.490525	-0.062525	-2.5557E-05	1.5026	0.00061421	1.4401	0.00058865	408.75265006169104	107.75	0.10323	107.75	107.7	107.81	0					7	5	2	0	0	0	2.3239	1	46281	46281		2.5775	1.7838	1	5094100			36661	16063	18212	18290	42759	42759					0.07539909082322538
VGLGRAVEVRR	11	Unmodified	_VGLGRAVEVRR_					0	0	0		ENST00000497918.5_1_2:220029863-220033027:-|nuORF	ENST00000497918.5_1_2:220029863-220033027:-|nuORF	ENST00000497918.5_1_2:220029863-220033027:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3707763552666	2	606.370195	1210.72584	2.4698	0.0014976	-0.25012	-0.00015167	2.2197	0.001346	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	1.0357	1	31789	31789		1.4819	0	1	6795700			36662	6965	18213	18291	42760	42760					0.12890394539772387
VGLGRAVEVRR	11	Unmodified	_VGLGRAVEVRR_					0	0	0		ENST00000497918.5_1_2:220029863-220033027:-|nuORF	ENST00000497918.5_1_2:220029863-220033027:-|nuORF	ENST00000497918.5_1_2:220029863-220033027:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3716308474541	2	606.370195	1210.72584	2.6989	0.0016366	-0.80005	-0.00048513	1.8989	0.0011514	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	1.0357	1	31690	31690		1.4819	0	1	6855700			36663	6965	18213	18291	42761	42761					0.12890394539772387
VGLHLQREK	9	Unmodified	_VGLHLQREK_					0	0	0			REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	REV__TRRAP|p.Q3700Cfs*14|1|0.37|ENSG00000196367|chr7:99011251-99011252|-/GTGCGTTAAATCTGTCACCAGAA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	360.2017700076103	3	360.548852	1078.62473	-0.11973	-4.317E-05	0.46362	0.00016716	0.34389	0.00012399	360.54903966346654	11.7	0.4644	11.789	11.526	11.99	0.089381					21	14	2	0	0	0	0.11901	1	4807	4807		1.0715	0	1	1510000	+		36664	11629	18214	18292	42762	42762					0.0885594283708997
VGLHPGFP	8	Unmodified	_VGLHPGFP_					0	0	0		ENST00000554026.5_1_14:76548780-76549917:+|nuORF	ENST00000554026.5_1_14:76548780-76549917:+|nuORF	ENST00000554026.5_1_14:76548780-76549917:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2273742556572	2	412.226688	822.438824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.811	1	23.811	23.311	24.311	0								0	0	0	1.0178	1	9929	9929		0.79363	0	1				36665	7285	18215	18293	42763	42763					0.020501653884252846
VGLIGLSIP	9	Unmodified	_VGLIGLSIP_					0	0	0			REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7804138064384	2	434.778754	867.542954	1.2169	0.0005291	2.8274	0.0012293	4.0443	0.0017584	434.7800072889284	24.24	1.1607	24.482	24.073	25.233	0.24252					79	37	3	0	0	0	0.82604	1	10188	10188		2.3027	0	1	1744900	+		36666	14827	18216	18294	42764	42764					0.10388447425293634
VGLIGLSIP	9	Unmodified	_VGLIGLSIP_					0	0	0			REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	434.778754	867.542954	0.49008	0.00021308	5.5554	0.0024154	6.0455	0.0026285	434.78125287545726	24.699	0.39738	24.699	24.461	24.858	0	0.29693	0.0019441	NaN	2.3027	22	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	370130	+		36667	14827	18216	18294							0.10388447425293634
VGLIGLSIP	9	Unmodified	_VGLIGLSIP_					0	0	0			REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	REV__tr|A0A553SHY7|A0A553SHY7_NIACIABC-2typetransportsystempermeaseproteinOS=NialliacirculansOX=1397GN=CEQ21_13890PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	434.778754	867.542954	1.2169	0.0005291	2.8274	0.0012293	4.0443	0.0017584	434.7800072889284	24.24	1.1607	24.482	24.073	25.233	0.24252	0.080312	-0.00042809	NaN	2.3027	79	37	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1744900	+		36668	14827	18216	18294							0.10388447425293634
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.9187499880791	3	365.917771	1094.73148	0.59412	0.0002174	2.2917	0.00083856	2.8858	0.001056	365.9181853900502	24.038	0.27567	24.281	24.136	24.412	0.24252					14	8	2	0	0	0	0.89803	1	10059	10059		0.15932	0.01943	1	395720	+		36669	9027	18217	18295	42765	42765					0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MSMS	GG20161007_CRH_Patient100_A02_02	2	365.9183837771416	3	365.917771	1094.73148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.561	1	20.771	20.271	21.271	0.21024								0	0	0	0.66254	1	8539	8539		0.15932	0.15932	1		+		36670	9027	18217	18295	42766	42766					0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.2538329958916	3	365.917771	1094.73148	-0.48244	-0.00017653	3.393	0.0012416	2.9105	0.001065	366.2533640959026	18.39	0.30997	19.369	19.147	19.457	0.97922					18	11	2	0	0	0	0.89803	1	7669	7669		0.69767	0.53834	1	501460	+		36671	9027	18217	18295	42767	42767					0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.9182311892509	3	365.917771	1094.73148	-0.030575	-1.1188E-05	2.3425	0.00085717	2.312	0.00084599	365.9185922826863	17.742	0.35915	19.19	19.016	19.375	1.448					19	11	2	0	0	0	0.89803	1	7354	7354		0.15932	0.15932	1	981250	+		36672	9027	18217	18295	42768	42768					0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MSMS	GG20161007_CRH_Patient100_W632_02	4	365.9188110232353	3	365.917771	1094.73148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.829	1	24.48	23.98	24.98	1.6511								0	0	0	0.66254	1	9531	9531		0.15932	0.15932	1		+		36673	9027	18217	18295	42769	42769					0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	365.917771	1094.73148	0.32908	0.00012042	2.1463	0.00078536	2.4754	0.00090578	365.9185746776539	19.138	0.36229	19.331	19.139	19.502	0.19342	0.034479	-0.00049907	NaN	0.69767	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	761900	+		36674	9027	18217	18295							0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	365.917771	1094.73148	-0.48244	-0.00017653	3.393	0.0012416	2.9105	0.001065	366.2533640959026	18.39	0.30997	19.369	19.147	19.457	0.97922	0.072149	0.00086949	NaN	0.69767	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	501460	+		36675	9027	18217	18295							0.18790680278880245
VGLIILIEIL	10	Unmodified	_VGLIILIEIL_					0	0	0			REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	REV__nc|ENSG00000101251|Q5TEA6-2|SEL1L2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	365.917771	1094.73148	-0.030575	-1.1188E-05	2.3425	0.00085717	2.312	0.00084599	365.9185922826863	17.742	0.35915	19.19	19.016	19.375	1.448	-0.10663	-0.00028364	NaN	0.69767	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	981250	+		36676	9027	18217	18295							0.18790680278880245
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9421264529228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.127	1	10.127	9.6267	10.627	0								0	0	0	0.63775	1	4174	4174		0.35063	0.35063	1		+		36677	13319	18218	18296	42770	42770					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9398681521416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.51	1	15.51	15.01	16.01	0								0	0	0	0.63775	1	6439	6439		0.35063	0.35063	1		+		36678	13319	18218	18296	42771	42771					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9466430544853	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.631	1	15.631	15.131	16.131	0								0	0	0	0.63775	1	6490	6490		0.35063	0.35063	1		+		36679	13319	18218	18296	42772	42772					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9470703005791	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.911	1	15.911	15.411	16.411	0								0	0	0	0.63775	1	6606	6606		0.35063	0.043601	1		+		36680	13319	18218	18296	42773	42773					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9455444216728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.892	1	16.892	16.392	17.392	0								0	0	0	0.63775	1	7011	7011		0.35063	0.35063	1		+		36681	13319	18218	18296	42774	42774					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9437133669853	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.128	1	17.128	16.628	17.628	0								0	0	0	0.63775	1	7109	7109		0.35063	0.081612	1		+		36682	13319	18218	18296	42775	42775					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9459106326103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.416	1	17.416	16.916	17.916	0								0	0	0	0.63775	1	7229	7229		0.35063	0.35063	1		+		36683	13319	18218	18296	42776	42776					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9440795779228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.527	1	17.527	17.027	18.027	0								0	0	0	0.63775	1	7276	7276		0.35063	0.35063	1		+		36684	13319	18218	18296	42777	42777					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9457275271416	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.272	1	18.272	17.772	18.772	0								0	0	0	0.63775	1	7592	7592		0.35063	0.35063	1		+		36685	13319	18218	18296	42778	42778					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9485351443291	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.399	1	18.399	17.899	18.899	0								0	0	0	0.63775	1	7646	7646		0.35063	0.35063	1		+		36686	13319	18218	18296	42779	42779					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9451782107353	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.859	1	19.859	19.359	20.359	0								0	0	0	0.63775	1	8254	8254		0.35063	0.35063	1		+		36687	13319	18218	18296	42780	42780					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9463378787041	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.986	1	19.986	19.486	20.486	0								0	0	0	0.63775	1	8306	8306		0.35063	0.081612	1		+		36688	13319	18218	18296	42781	42781					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9468261599541	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.003	1	21.003	20.503	21.503	0								0	0	0	0.63775	1	8732	8732		0.35063	0.043601	1		+		36689	13319	18218	18296	42782	42782					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9446288943291	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.416	1	21.416	20.916	21.916	0								0	0	0	0.63775	1	8905	8905		0.35063	0.043601	1		+		36690	13319	18218	18296	42783	42783					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9445068240166	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.762	1	21.762	21.262	22.262	0								0	0	0	0.63775	1	9050	9050		0.35063	0.35063	1		+		36691	13319	18218	18296	42784	42784					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9460327029228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.285	1	22.285	21.785	22.785	0								0	0	0	0.63775	1	9269	9269		0.35063	0.043601	1		+		36692	13319	18218	18296	42785	42785					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9468261599541	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.813	1	23.813	23.313	24.313	0								0	0	0	0.63775	1	9930	9930		0.35063	0.35063	1		+		36693	13319	18218	18296	42786	42786					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454833865166	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.093	1	24.093	23.593	24.593	0								0	0	0	0.63775	1	10048	10048		0.35063	0.35063	1		+		36694	13319	18218	18296	42787	42787					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9456664919853	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.256	1	24.256	23.756	24.756	0								0	0	0	0.63775	1	10116	10116		0.35063	0.35063	1		+		36695	13319	18218	18296	42788	42788					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9470092654228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.841	1	24.841	24.341	25.341	0								0	0	0	0.63775	1	10363	10363		0.35063	0.35063	1		+		36696	13319	18218	18296	42789	42789					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9460327029228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.353	1	25.353	24.853	25.853	0								0	0	0	0.63775	1	10581	10581		0.35063	0.35063	1		+		36697	13319	18218	18296	42790	42790					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454833865166	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.212	1	27.212	26.712	27.712	0								0	0	0	0.63775	1	11376	11376		0.35063	0	1		+		36698	13319	18218	18296	42791	42791					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9426147341728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.224	1	14.337	13.837	14.837	0.11295								0	0	0	0.63775	1	5901	5901		0.35063	0.35063	1		+		36699	13319	18218	18296	42792	42792					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9465209841728	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.153	1	15.266	14.766	15.766	0.11295								0	0	0	0.63775	1	6289	6289		0.35063	0.35063	1		+		36700	13319	18218	18296	42793	42793					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9459716677666	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.001	1	16.131	15.631	16.631	0.13022								0	0	0	0.63775	1	6641	6641		0.35063	0.35063	1		+		36701	13319	18218	18296	42794	42794					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9451171755791	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.244	1	17.395	16.895	17.895	0.15093								0	0	0	0.63775	1	7152	7152		0.35063	0.35063	1		+		36702	13319	18218	18296	42795	42795					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9433471560478	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.317	1	18.49	17.99	18.99	0.17285								0	0	0	0.63775	1	7603	7603		0.35063	0.35063	1		+		36703	13319	18218	18296	42796	42796					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9468871951103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.435	1	18.608	18.108	19.108	0.17285								0	0	0	0.63775	1	7653	7653		0.35063	0.35063	1		+		36704	13319	18218	18296	42797	42797					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9476196169853	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.379	1	19.573	19.073	20.073	0.19342								0	0	0	0.63775	1	8049	8049		0.35063	0.35063	1		+		36705	13319	18218	18296	42798	42798					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9462158083916	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.5	1	19.694	19.194	20.194	0.19342								0	0	0	0.63775	1	8101	8101		0.35063	0.35063	1		+		36706	13319	18218	18296	42799	42799					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9418823122978	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.919	1	20.112	19.612	20.612	0.19342								0	0	0	0.63775	1	8277	8277		0.35063	0.35063	1		+		36707	13319	18218	18296	42800	42800					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9443847537041	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.143	1	20.353	19.853	20.853	0.21024								0	0	0	0.63775	1	8369	8369		0.35063	0.35063	1		+		36708	13319	18218	18296	42801	42801					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9421874880791	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.303	1	20.513	20.013	21.013	0.21024								0	0	0	0.63775	1	8434	8434		0.35063	0.35063	1		+		36709	13319	18218	18296	42802	42802					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9449951052666	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.493	1	20.703	20.203	21.203	0.21024								0	0	0	0.63775	1	8512	8512		0.35063	0.35063	1		+		36710	13319	18218	18296	42803	42803					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9443237185478	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.777	1	20.987	20.487	21.487	0.21024								0	0	0	0.63775	1	8629	8629		0.35063	0.35063	1		+		36711	13319	18218	18296	42804	42804					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9450561404228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.63	1	22.863	22.363	23.363	0.23306								0	0	0	0.63775	1	9433	9433		0.35063	0.35063	1		+		36712	13319	18218	18296	42805	42805					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	661.9439575076103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.681	1	23.923	23.423	24.423	0.24251								0	0	0	0.63775	1	9876	9876		0.35063	0.35063	1		+		36713	13319	18218	18296	42806	42806					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.9468871951103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.113	1	19.093	18.593	19.593	0.97922								0	0	0	0.63775	1	7541	7541		0.35063	0.081612	1		+		36714	13319	18218	18296	42807	42807					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.9439575076103	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.546	1	22.723	22.223	23.223	1.177								0	0	0	0.63775	1	8997	8997		0.35063	0.043601	1		+		36715	13319	18218	18296	42808	42808					0.23019215007184357
VGLIRRLARRL	11	Unmodified	_VGLIRRLARRL_					0	0	0			REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	REV__ENST00000477413.1_1_1:224544770-224545154:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.9460327029228	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.052	1	49.44	48.94	49.94	1.388								0	0	0	0.63775	1	20115	20115		1.4819	0	1		+		36716	13319	18218	18296	42809	42809					0.23019215007184357
VGLKKDVDAA	10	Unmodified	_VGLKKDVDAA_					0	0	0		ENSG00000185069|ENST00000332411|KRT76;CON__Q01546	ENSG00000185069|ENST00000332411|KRT76	ENSG00000185069|ENST00000332411|KRT76	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.6250793337822	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.82	1	48.82	48.32	49.32	0								0	0	0	0.66166	1	20385	20385		1.6526	0	1			+	36717	353	18219	18297	42810	42810					0.06425725614701605
VGLKRNYIRL	10	Unmodified	_VGLKRNYIRL_					0	0	0		ENSG00000177084|ENST00000320574|POLE;POLE|p.R721Efs*71|1|0.03|ENSG00000177084|chr12:132668369-132668369|C/-|frameshift_variant	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MSMS	GG20161007_CRH_Patient100_A02_02	2	616.3861572146416	2	616.385314	1230.75608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.986	1	46.315	45.815	46.815	0.32899								0	0	0	0.66166	1	19301	19301		1.6526	0	1				36718	4433	18220	18298	42811	42811					0.14992753204978726
VGLLARVLALV	11	Unmodified	_VGLLARVLALV_					0	0	0		ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3834106326103	2	562.381709	1122.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.777	1	68.777	68.277	69.277	0								0	0	0	0.63775	1	28641	28641		0.35063	0	1				36719	6918	18221	18299	42812	42812					0.19240020604524943
VGLLARVLALV	11	Unmodified	_VGLLARVLALV_					0	0	0		ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3810302615166	2	562.381709	1122.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.526	1	69.526	69.026	70.026	0								0	0	0	0.63775	1	28954	28954		0.35063	0	1				36720	6918	18221	18299	42813	42813					0.19240020604524943
VGLLARVLALV	11	Unmodified	_VGLLARVLALV_					0	0	0		ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	ENST00000492040.1_1_16:30593979-30594321:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3804809451103	2	562.381709	1122.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.527	1	68.849	68.349	69.349	0.32224								0	0	0	0.63775	1	28685	28685		0.35063	0	1				36721	6918	18221	18299	42814	42814					0.19240020604524943
VGLLCLNPRKV	11	Unmodified	_VGLLCLNPRKV_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|19|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3715698122978	2	606.368275	1210.722	2.699	0.0016366	2.3662	0.0014348	5.0651	0.0030713	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	1.0031	1	31573	31573		3.5965	0	1	6855700	+		36722	14320	18222	18300	42815	42815					0.12506588721703338
VGLLGGPLLL	10	Unmodified	_VGLLGGPLLL_					0	0	0			REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	REV__ENST00000282096.8_1_11:14665308-14793517:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	318.0385925173759	3	317.879428	950.616454	-3.2234	-0.0010247	0.76622	0.00024357	-2.4572	-0.00078109	317.8797967435007	18.245	0.71189	18.245	17.996	18.708	0					38	25	2	0	0	0	0.12559	1	7741	7741		0.15932	0	1	608600	+		36723	12259	18223	18301	42816	42816					0.13916995867759852
VGLLGILR	8	Unmodified	_VGLLGILR_					0	0	0		ENST00000429630.1_1_7:143077188-143077587:-|nuORF	ENST00000429630.1_1_7:143077188-143077587:-|nuORF	ENST00000429630.1_1_7:143077188-143077587:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5707885622978	1	840.566549	839.559273	2.9118	0.0024476	2.5768	0.002166	5.4886	0.0046135	840.5689060105464	109.32	0.34963	109.48	109.35	109.7	0.15898					23	15	2	0	0	0	0.89176	1	47496	47496		0.79363	0	1	11166000			36724	6491	18224	18302	42817	42817					0.13307573382041937
VGLLGPIK	8	Unmodified	_VGLLGPIK_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.7691833376884	2	398.768189	795.521825	0.46819	0.0001867	3.3384	0.0013312	3.8066	0.0015179	398.76936856018426	16.479	0.37022	16.63	16.324	16.694	0.15093					25	13	2	0	0	0	0.88587	1	6820	6820		5.2307	0	1	3255400	+		36725	9639	18225	18303	42818	42818					0.11588482116417254
VGLLGPIK	8	Unmodified	_VGLLGPIK_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	398.768189	795.521825	-0.89229	-0.00035582	5.8532	0.0023341	4.9609	0.0019783	398.77017030740467	16.721	0.44148	16.721	16.437	16.878	0	0.054897	0.0014966	NaN	5.2307	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2452400	+		36726	9639	18225	18303							0.11588482116417254
VGLLGPIK	8	Unmodified	_VGLLGPIK_					0	0	0			REV__nc|ENSG00000124207|P55060-4|CSE1L	REV__nc|ENSG00000124207|P55060-4|CSE1L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	398.768189	795.521825	0.08901	3.5494E-05	2.1528	0.00085845	2.2418	0.00089395	398.76870119653313	15.664	0.15033	16.703	16.641	16.791	1.0392	0.03725	-0.0014546	NaN	5.2307	14	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4278800	+		36727	9639	18225	18303							0.11588482116417254
VGLLIFKPNLW	11	Unmodified	_VGLLIFKPNLW_					0	0	0		tr|A0A553SH77|A0A553SH77_NIACIYdbS-likePHdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12315PE=4SV=1	tr|A0A553SH77|A0A553SH77_NIACIYdbS-likePHdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12315PE=4SV=1	tr|A0A553SH77|A0A553SH77_NIACIYdbS-likePHdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12315PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.3973876833916	2	650.394816	1298.77508	1.4975	0.00097394	1.9193	0.0012483	3.4168	0.0022223	650.395630949906	79.739	0.55715	81.456	81.106	81.663	1.7167					38	17	3	0	0	0	1.0031	1	33450	33450		3.5965	1.2938	1	2691500			36728	16139	18226	18304	42819	42819					0.13764289776031546
VGLLLFLLLW	10	Unmodified	_VGLLLFLLLW_					0	0	0		ENST00000494187.1_1_7:30821643-30825836:+|nuORF	ENST00000494187.1_1_7:30821643-30825836:+|nuORF	ENST00000494187.1_1_7:30821643-30825836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2603942751884	3	396.258127	1185.75255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.189	1	94.466	93.966	94.966	1.277								0	0	0	0.66254	1	39213	39213		0.15932	0	1				36729	6934	18227	18305	42820	42820					0.16710690378431536
VGLLLSFLRR	10	Unmodified	_VGLLLSFLRR_					0	0	0		ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3812133669853	2	587.376958	1172.73936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.75	1	117.75	117.25	118.25	0								0	0	0	0.66166	1	50761	50761		1.6526	0.17072	1				36730	5535	18228	18306	42821	42821					0.1599025231903397
VGLLLSFLRR	10	Unmodified	_VGLLLSFLRR_					0	0	0		ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3804809451103	2	587.376958	1172.73936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.98	1	117.98	117.48	118.48	0								0	0	0	0.66166	1	50852	50852		1.6526	0.17072	1				36731	5535	18228	18306	42822	42822					0.1599025231903397
VGLLLSFLRR	10	Unmodified	_VGLLLSFLRR_					0	0	0		ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3795654177666	2	587.376958	1172.73936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.21	1	118.21	117.71	118.71	0								0	0	0	0.66166	1	50944	50944		1.6526	0.17072	1				36732	5535	18228	18306	42823	42823					0.1599025231903397
VGLLLSFLRR	10	Unmodified	_VGLLLSFLRR_					0	0	0		ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	ENST00000225174.7_1_10:81114108-81114237:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3798095583916	2	587.376958	1172.73936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.43	1	118.43	117.93	118.93	0								0	0	0	0.66166	1	51033	51033		1.6526	0	1				36733	5535	18228	18306	42824	42824					0.1599025231903397
VGLMCEGAPM	10	Unmodified	_VGLMCEGAPM_					0	0	0		ENST00000465925.6_2_3:49454975-49456881:-|nuORF;nc|ENSG00000145020|P48728-2|AMT;nc|ENSG00000145020|P48728-3|AMT;nc|ENSG00000145020|P48728-4|AMT;ENSG00000145020|ENST00000273588|AMT	ENST00000465925.6_2_3:49454975-49456881:-|nuORF	ENST00000465925.6_2_3:49454975-49456881:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2191039919853	2	504.221574	1006.42859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.966	1	29.741	29.241	30.241	1.7754								0	0	0	0.66166	1	11705	11705		1.6526	0.85899	1				36734	3100	18229	18307	42825	42825					-0.07436269714980881
VGLMILLSKV	10	Unmodified	_VGLMILLSKV_					0	0	0		tr|A0A553SH81|A0A553SH81_NIACIEnergy-couplingfactortransportertransmembraneproteinEcfTOS=NialliacirculansOX=1397GN=ecfTPE=3SV=1	tr|A0A553SH81|A0A553SH81_NIACIEnergy-couplingfactortransportertransmembraneproteinEcfTOS=NialliacirculansOX=1397GN=ecfTPE=3SV=1	tr|A0A553SH81|A0A553SH81_NIACIEnergy-couplingfactortransportertransmembraneproteinEcfTOS=NialliacirculansOX=1397GN=ecfTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	536.8463622927666	2	536.843571	1071.67259	2.8116	0.0015094	4.4048	0.0023647	7.2164	0.0038741	536.8454632384019	101.93	0.15105	101.99	101.92	102.07	0.062805					7	3	3	0	0	0	0.89803	1	42689	42689		0.45834	0	1	1395900			36735	16141	18230	18308	42826	42826					0.13961880712918173
VGLMIMFV	8	Unmodified	_VGLMIMFV_					0	0	0			REV__tr|A0A553SNR6|A0A553SNR6_NIACISporegernimationproteinKCOS=NialliacirculansOX=1397GN=CEQ21_24850PE=3SV=1	REV__tr|A0A553SNR6|A0A553SNR6_NIACISporegernimationproteinKCOS=NialliacirculansOX=1397GN=CEQ21_24850PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	455.2501708865166	2	455.25046	908.486367	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.876	1	32.158	31.658	32.658	1.2825								0	0	0	1.0178	1	12957	12957		0.79363	0	1		+		36736	15059	18231	18309	42827	42827					0.02846360272747006
VGLMLYRMK	9	Unmodified	_VGLMLYRMK_					0	0	0		SDC1|p.F273L|1|0.04|ENSG00000115884|chr2:20202880-20202880|G/C|missense_variant	SDC1|p.F273L|1|0.04|ENSG00000115884|chr2:20202880-20202880|G/C|missense_variant	SDC1|p.F273L|1|0.04|ENSG00000115884|chr2:20202880-20202880|G/C|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	555.8138305544853	2	555.811748	1109.60894	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.971	1	2.971	2.471	3.471	0								0	0	0	0.42693	1	1218	1218		0.6015	0	1				36737	15948	18232	18310	42828	42828					0.058521970041738314
VGLMQNTIFV	10	Unmodified	_VGLMQNTIFV_					0	0	0		nc|ENSG00000167291|Q8TBP0-3|TBC1D16;nc|ENSG00000167291|Q8TBP0-4|TBC1D16;nc|ENSG00000167291|Q8TBP0-2|TBC1D16;ENSG00000167291|ENST00000310924|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.3076049685478	2	561.30481	1120.59507	1.4726	0.00082659	1.1744	0.0006592	2.647	0.0014858	561.3054209810666	54.207	0.34778	54.207	53.998	54.346	0					23	10	3	0	0	0	0.78468	1	22597	22597		13.906	1.3745	1	849520			36738	3962	18233	18311	42829	42829					0.039592427767274785
VGLMQNTIFV	10	Unmodified	_VGLMQNTIFV_					0	0	0		nc|ENSG00000167291|Q8TBP0-3|TBC1D16;nc|ENSG00000167291|Q8TBP0-4|TBC1D16;nc|ENSG00000167291|Q8TBP0-2|TBC1D16;ENSG00000167291|ENST00000310924|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.8089477419853	2	561.30481	1120.59507	1.7582	0.00098687	1.0021	0.00056246	2.7602	0.0015493	561.3051693091408	53.54	0.3448	53.863	53.694	54.039	0.32283					19	10	3	0	0	0	0.78468	1	22407	22407		13.906	1.3745	1	1255200			36739	3962	18233	18311	42830	42830					0.039592427767274785
VGLMQNTIFV	10	Unmodified	_VGLMQNTIFV_					0	0	0		nc|ENSG00000167291|Q8TBP0-3|TBC1D16;nc|ENSG00000167291|Q8TBP0-4|TBC1D16;nc|ENSG00000167291|Q8TBP0-2|TBC1D16;ENSG00000167291|ENST00000310924|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3066284060478	2	561.30481	1120.59507	1.1474	0.00064403	0.13864	7.782E-05	1.286	0.00072185	561.3055515063229	52.243	0.53947	53.64	53.265	53.804	1.3966					31	17	3	0	0	0	0.35292	2	21851	21851;21902		36.127	3.8215	1	3566500			36740	3962	18233	18311	42831;42832	42831					0.039592427767274785
VGLMQNTIFV	10	Unmodified	_VGLMQNTIFV_					0	0	0		nc|ENSG00000167291|Q8TBP0-3|TBC1D16;nc|ENSG00000167291|Q8TBP0-4|TBC1D16;nc|ENSG00000167291|Q8TBP0-2|TBC1D16;ENSG00000167291|ENST00000310924|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	nc|ENSG00000167291|Q8TBP0-3|TBC1D16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3032714724541	2	561.30481	1120.59507	0.74052	0.00041566	-0.23213	-0.0001303	0.50839	0.00028536	561.3050018059623	51.684	0.58873	53.656	53.21	53.799	1.9722					35	20	4	0	0	0	0.47063	2	21615	21615;21665		29.082	3.6823	1	3713000			36741	3962	18233	18311	42833;42834	42833					0.039592427767274785
VGLNKEHANR	10	Unmodified	_VGLNKEHANR_					0	0	0		tr|A0A553SFM5|A0A553SFM5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09055PE=3SV=1	tr|A0A553SFM5|A0A553SFM5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09055PE=3SV=1	tr|A0A553SFM5|A0A553SFM5_NIACIATP-bindingcassettedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_09055PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	569.3118163943291	2	569.309803	1136.60505	1.5348	0.00087379	-1.6524	-0.00094074	-0.11759	-6.6947E-05	569.3087355294819	67.816	0.66685	68.138	67.931	68.597	0.32269					33	20	2	0	0	0	0.89803	1	28401	28401		1.6526	0	1	650410			36742	16066	18234	18312	42835	42835					0.04221566826322487
VGLNLLFK	8	Unmodified	_VGLNLLFK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	301.1283447146416	3	301.860256	902.558939	0.16011	4.833E-05	1.9521	0.00058925	2.1122	0.00063758	301.8605337252689	24.859	0.92203	25.103	24.776	25.698	0.24469					74	29	4	0	0	0	2.3239	1	10414	10414		10.824	5.0921	1	7029700	+		36743	15572	18235	18313	42836	42836					0.10376153662184606
VGLNLLFK	8	Unmodified	_VGLNLLFK_					0	0	0			REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	REV__tr|A0A7D6VZW1|A0A7D6VZW1_9CLOTGlycine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=glyQSPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1281616091728	3	301.860256	902.558939	0.070564	2.13E-05	1.7407	0.00052546	1.8113	0.00054676	301.8603876147693	23.889	0.92357	25.13	24.531	25.455	1.241					73	29	4	0	0	0	2.3239	1	9925	9925		6.7232	2.7788	1	5903400	+		36744	15572	18235	18313	42837	42837					0.10376153662184606
VGLPARGK	8	Unmodified	_VGLPARGK_					0	0	0		nc|ENSG00000114268|Q16877-3|PFKFB4;ENSG00000114268|ENST00000232375|PFKFB4;ENSG00000158571|ENST00000375006|PFKFB1;ENST00000417753.5_1_3:48557182-48594149:-|nuORF;ENST00000496767.5_1_3:48586091-48599213:-|nuORF;ENST00000490115.5_1_3:48586091-48594264:-|nuORF;nc|ENSG00000114268|Q16877-2|PFKFB4;nc|ENSG00000170525|Q16875-3|PFKFB3;nc|ENSG00000170525|Q16875-2|PFKFB3;ENSG00000170525|ENST00000379775|PFKFB3;nc|ENSG00000170525|Q16875-4|PFKFB3	nc|ENSG00000114268|Q16877-3|PFKFB4	nc|ENSG00000114268|Q16877-3|PFKFB4	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2513610720634	2	399.253237	796.491922	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.583	1	56.904	56.404	57.404	0.32103								0	0	0	1.0178	1	23723	23723		2.3027	0	1				36745	1855	18236	18314	42838	42838					0.08553543171092315
VGLPVTCRV	9	Unmodified	_VGLPVTCRV_					0	0	0		ENST00000501855.6_1_5:180261712-180261769:+|nuORF	ENST00000501855.6_1_5:180261712-180261769:+|nuORF	ENST00000501855.6_1_5:180261712-180261769:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2765075564384	2	472.273312	942.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.827	1	67.152	66.652	67.652	0.32449								0	0	0	0.42693	1	27973	27973		2.0598	0.21551	1				36746	6976	18237	18315	42839	42839					0.05850721779347623
VGLQLLIVG	9	Unmodified	_VGLQLLIVG_					0	0	0			REV__sp|F5HAM0|UL144_HCMVMMembraneglycoproteinUL144OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL144PE=3SV=1	REV__sp|F5HAM0|UL144_HCMVMMembraneglycoproteinUL144OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL144PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2479736208916	3	304.535661	910.585153	-1.2247	-0.00037297	1.7685	0.00053857	0.54377	0.0001656	304.53608189316446	14.146	0.19719	14.915	14.793	14.99	0.76937					20	8	3	0	0	0	0.11954	1	5851	5851		0.26902	0.26902	1	2781800	+		36747	14636	18238	18316	42840	42840					0.12628422833677178
VGLQVVAVK	9	Unmodified	_VGLQVVAVK_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7971679568291	2	456.797478	911.580402	0.79978	0.00036534	-0.23246	-0.00010619	0.56732	0.00025915	456.7972927853191	32.474	0.21116	33.752	33.613	33.824	1.2782					10	6	2	0	0	0	0.050451	1	13604	13604		74.929	34.972	1	716400			36748	3074	18239	18317	42841	42841					0.1210753869089558
VGLQVVAVK	9	Unmodified	_VGLQVVAVK_					0	0	0		ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	ENSG00000144381|ENST00000388968|HSPD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7972289919853	2	456.797478	911.580402	1.0841	0.00049523	-0.057798	-2.6402E-05	1.0263	0.00046883	456.7976578521119	31.886	0.19512	33.71	33.594	33.789	1.8246					10	6	2	0	0	0	0.071837	1	13357	13357		74.929	34.972	1	639030			36749	3074	18239	18317	42842	42842					0.1210753869089558
VGLRAAGRA	9	Unmodified	_VGLRAAGRA_					0	0	0		ENST00000377411.4_1_1:9171491-9189192:-|nuORF	ENST00000377411.4_1_1:9171491-9189192:-|nuORF	ENST00000377411.4_1_1:9171491-9189192:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7680847048759	2	435.767043	869.519533	2.1958	0.00095685	-0.072719	-3.1688E-05	2.1231	0.00092516	435.76667913479605	69.121	1.0362	70.486	69.966	71.002	1.3657					51	33	2	0	0	0	0.77526	1	29013	29013		4.3292	1.44	1	1790000			36750	6197	18240	18318	42843	42843					0.07955446431321889
VGLRAATGR	9	Unmodified	_VGLRAATGR_					0	0	0		ENSG00000204381|ENST00000375614|LAYN;nc|ENSG00000204381|Q6UX15|LAYN;LAYN|p.H56Mfs*7|1|0.12|ENSG00000204381|chr11:111543978-111543978|C/-|frameshift_variant	ENSG00000204381|ENST00000375614|LAYN	ENSG00000204381|ENST00000375614|LAYN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7736999392509	2	450.772326	899.530098	2.3479	0.0010584	0.71089	0.00032045	3.0588	0.0013788	450.77246756579075	83.341	0.44263	84.529	84.262	84.704	1.1879					31	13	3	0	0	0	0.8462	1	34952	34952		0.52476	0	1	2773700			36751	5138	18241	18319	42844	42844					0.07631429085756736
VGLREGMLYR	10	Unmodified	_VGLREGMLYR_					0	0	0			REV__nc|ENSG00000134333|P00338-4|LDHA	REV__nc|ENSG00000134333|P00338-4|LDHA	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3287841677666	2	597.326608	1192.63866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.222	1	86.222	85.722	86.722	0								0	0	0	0.66166	1	35927	35927		1.6526	0	1		+		36752	14439	18242	18320	42845	42845					0.05004852273873439
VGLRHAEQ	8	Unmodified	_VGLRHAEQ_					0	0	0		ENST00000367874.4_1_1:166845454-166845523:-|nuORF	ENST00000367874.4_1_1:166845454-166845523:-|nuORF	ENST00000367874.4_1_1:166845454-166845523:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.2512084841728	2	455.248683	908.482814	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.912	1	89.359	88.859	89.859	1.4467								0	0	0	1.0178	1	37057	37057		2.5775	0.51773	1				36753	6074	18243	18321	42846	42846					0.024911498147503153
VGLRLAPTP	9	Unmodified	_VGLRLAPTP_					0	0	0			REV__ENST00000519435.5_1_8:134558113-134582608:-|nuORF	REV__ENST00000519435.5_1_8:134558113-134582608:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	462.1475707888603	2	462.287277	922.560001	2.4051	0.0011118	2.8285	0.0013076	5.2336	0.0024194	462.28814566472005	46.842	0.12754	47.172	47.105	47.233	0.33034					5	3	2	0	0	0	0.11908	1	19669	19669		2.0598	0	1	524100	+		36754	13614	18244	18322	42847	42847					0.09562368031083679
VGLSFPLFK	9	Unmodified	_VGLSFPLFK_					0	0	0		nc|ENSG00000104866|O75864-2|PPP1R37	nc|ENSG00000104866|O75864-2|PPP1R37	nc|ENSG00000104866|O75864-2|PPP1R37	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	504.7812377810478	2	504.299853	1006.58515	1.9499	0.00098335	-0.53828	-0.00027146	1.4116	0.00071189	504.299784265965	49.213	0.5278	50.604	50.298	50.826	1.3911					23	16	2	0	0	0	0.11463	1	20502	20502		4.3292	0	1	1292700			36755	7847	18245	18323	42848	42848					0.08212422833662458
VGLSFPLFK	9	Unmodified	_VGLSFPLFK_					0	0	0		nc|ENSG00000104866|O75864-2|PPP1R37	nc|ENSG00000104866|O75864-2|PPP1R37	nc|ENSG00000104866|O75864-2|PPP1R37	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	504.299853	1006.58515	1.8224	0.00091902	-2.2849	-0.0011523	-0.46254	-0.00023326	504.29903780716796	48.584	0.49495	50.562	50.422	50.917	1.9772	-0.021139	-0.0011402	NaN	4.3292	21	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1143300			36756	7847	18245	18323							0.08212422833662458
VGLSFWMRT	9	Unmodified	_VGLSFWMRT_					0	0	0			REV__ENST00000481145.1_1_1:89725323-89725548:-|nuORF	REV__ENST00000481145.1_1_1:89725323-89725548:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	548.3275024294853	2	548.784044	1095.55354	2.5615	0.0014057	-2.2178	-0.0012171	0.3437	0.00018862	548.7824735234882	74.897	0.24763	75.221	75.082	75.329	0.32464					14	7	2	0	0	0	0.091909	1	31370	31370		20.454	10.38	1	655140	+		36757	13358	18246	18324	42849	42849					0.009581068080706245
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4084960818291	1	699.403566	698.39629	1.4161	0.0009904	3.5448	0.0024792	4.9609	0.0034696	699.4057511287753	28.643	0.24536	28.643	28.504	28.749	0					11	7	2	0	0	0	0.89176	1	11985	11985		0.79363	0	1	1488800	+		36758	10581;13184	18247	18325	42850	42850					0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2078735232353	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89008	1	13901	13901		2.5775	0	1	2241600	+		36759	10581;13184	18247	18325	42851	42851					0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	350.2067443728447	2	350.205421	698.39629	0.40658	0.00014239	2.3511	0.00082337	2.7577	0.00096575	350.2060338112111	31.83	0.35823	33.655	33.49	33.848	1.8246					20	13	2	0	0	0	0.89176	1	13339	13339		0.79363	0	1	848930	+		36760	10581;13184	18247	18325	42852	42852					0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	350.1816284060478	2	350.205421	698.39629	1.7775	0.00062249	3.8403	0.0013449	5.6178	0.0019674	350.2067026240049	44.028	0.60034	45.971	45.639	46.239	1.9438					25	18	2	0	0	0	2.3239	1	18377	18377		0	0	1	431120	+		36761	10581;13184	18247	18325	42853	42853					0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	699.403566	698.39629	1.4161	0.0009904	3.5448	0.0024792	4.9609	0.0034696	699.4057511287753	28.643	0.24536	28.643	28.504	28.749	0	0.084447	-0.00032994	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1488800	+		36762	10581;13184	18247	18325							0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	699.403566	698.39629	0.96913	0.00067781	4.1922	0.0029321	5.1614	0.0036099	699.4063169979605	28.203	0.30634	28.474	28.243	28.549	0.27119	-0.084447	0.00012288	NaN	0.79363	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	828850	+		36763	10581;13184	18247	18325							0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	350.205421	698.39629	0.94065	0.00032942	2.5596	0.0008964	3.5003	0.0012258	350.2060541557923	33.363	0.23733	33.66	33.554	33.791	0.29701	0.0028386	9.5433E-05	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	242180	+		36764	10581;13184	18247	18325							0.03502770260206489
VGLSPLGG	8	Unmodified	_VGLSPLGG_					0	0	0			REV__ENSG00000159761|ENST00000403458|C16orf86;REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENSG00000159761|ENST00000403458|C16orf86	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	350.205421	698.39629	0.40658	0.00014239	2.3511	0.00082337	2.7577	0.00096575	350.2060338112111	31.83	0.35823	33.655	33.49	33.848	1.8246	-0.0028386	-5.064E-05	NaN	0.79363	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	848930	+		36765	10581;13184	18247	18325							0.03502770260206489
VGLSSHDG	8	Unmodified	_VGLSSHDG_					0	0	0		ENSG00000054219|ENST00000263636|LY75;nc|ENSG00000054219|O60449-2|LY75;LY75|p.S1527*|1|0.06|ENSG00000054219|chr2:159810645-159810645|G/-|frameshift_variant;nc|ENSG00000054219|O60449-3|LY75	ENSG00000054219|ENST00000263636|LY75	ENSG00000054219|ENST00000263636|LY75	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	771.3664428591728	1	771.363158	770.355882	1.7585	0.0013565	4.06	0.0031317	5.8185	0.0044882	771.3664494677511	79.462	0.3833	79.763	79.558	79.942	0.30047					24	11	3	0	0	0	0.88504	1	33210	33210		5.7604	0	1	1337500			36766	711	18248	18326	42854	42854					-0.03848196130229553
VGLTFIVMFVI	11	Unmodified	_VGLTFIVMFVI_					0	0	0			REV__tr|A0A7D6VSN9|A0A7D6VSN9_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07640PE=3SV=1	REV__tr|A0A7D6VSN9|A0A7D6VSN9_9CLOTTransportpermeaseproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07640PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8654052615166	2	619.864503	1237.71445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.713	1	81.713	81.213	82.213	0								0	0	0	0.63775	1	34036	34036		1.3295	0	1		+		36767	15457	18249	18327	42855	42855					0.10510436401409606
VGLTIQSIFSI	11	Unmodified	_VGLTIQSIFSI_					0	0	0			REV__nc|ENSG00000030066|Q12769-2|NUP160	REV__nc|ENSG00000030066|Q12769-2|NUP160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3436157107353	2	589.344989	1176.67542	1.3199	0.00077787	-1.1579	-0.00068242	0.16197	9.5457E-05	589.3438745408345	77.288	0.62978	79.039	78.721	79.35	1.7514					35	19	2	0	0	0	0.97491	1	32285	32285		5.2969	0.76802	1	1451100	+		36768	14385	18250	18328	42856	42856					0.09415427371436635
VGLTLHRYKVP	11	Unmodified	_VGLTLHRYKVP_					0	0	0			REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8845703005791	2	641.885147	1281.75574	1.7816	0.0011436	-2.9164	-0.001872	-1.1348	-0.00072839	641.8835233391707	77.945	0.50996	78.254	77.943	78.453	0.30932					36	15	3	0	0	0	1.0362	2	32547	32547;32596		1.3295	0.72803	1	1183000	+		36769	12489	18251	18329	42857;42858	42857					0.1261333348509197
VGLTLHRYKVP	11	Unmodified	_VGLTLHRYKVP_					0	0	0			REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8840209841728	2	641.885147	1281.75574	1.7643	0.0011325	-3.6589	-0.0023486	-1.8946	-0.0012161	641.8827940815319	80.063	0.91084	80.364	79.877	80.788	0.30047					64	28	3	0	0	0	1.0362	1	33477	33477		1.3295	0.13619	1	1155100	+		36770	12489	18251	18329	42859	42859					0.1261333348509197
VGLTLHRYKVP	11	Unmodified	_VGLTLHRYKVP_					0	0	0			REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8833495974541	2	641.885147	1281.75574	2.163	0.0013884	-2.4407	-0.0015666	-0.27766	-0.00017823	641.8836429475442	78.151	1.4143	79.432	78.823	80.238	1.2809					100	45	3	0	0	0	1.0084	1	32820	32820		3.2813	0.54611	1	2775700	+		36771	12489	18251	18329	42860	42860					0.1261333348509197
VGLTLHRYKVP	11	Unmodified	_VGLTLHRYKVP_					0	0	0			REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	REV__ENST00000339438.10_1_1:115259665-115259875:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8838989138603	2	641.885147	1281.75574	1.4587	0.0009363	-3.3931	-0.002178	-1.9345	-0.0012417	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0362	3	33898	33898;33947;34221		1.3295	0.72803	1	9116700	+		36772	12489	18251	18329	42861;42862;42863	42861					0.1261333348509197
VGLTSATLIS	10	Unmodified	_VGLTSATLIS_					0	0	0		ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	ENSG00000114933|ENST00000403263|INO80D	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2859680056572	2	481.281857	960.549162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.517	1	89.964	89.464	90.464	1.4467								0	0	0	0.66166	1	37304	37304		1.6526	0	1				36773	1889	18252	18330	42864	42864					0.06730920866152701
VGLVELILG	9	Unmodified	_VGLVELILG_					0	0	0		tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7935974001884	2	456.791861	911.569169	0.62519	0.00028558	3.0529	0.0013945	3.6781	0.0016801	456.7932410346483	19.377	0.39045	20.901	20.805	21.196	1.5237					12	12	2	0	0	0	0.84963	1	8060	8060		0.6015	0	1	431570			36774	16606	18253	18331	42865	42865					0.1098471659677216
VGLVELILG	9	Unmodified	_VGLVELILG_					0	0	0		tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	tr|A0A553SSD8|A0A553SSD8_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_02915PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	456.791861	911.569169	0.94967	0.0004338	4.7473	0.0021685	5.697	0.0026023	456.7943189279491	20.996	0.125	20.996	20.942	21.067	0	0.047721	0.0012549	NaN	0.6015	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	197510			36775	16606	18253	18331							0.1098471659677216
VGLVLLLQPK	10	Unmodified	_VGLVLLLQPK_					0	0	0		nc|ENSG00000174606|Q5VTE6-2|ANGEL2;ANGEL2|p.I403Sfs*15|1|0.07|ENSG00000174606|chr1:213000840-213000840|T/-|frameshift_variant;ENSG00000174606|ENST00000366962|ANGEL2	nc|ENSG00000174606|Q5VTE6-2|ANGEL2	nc|ENSG00000174606|Q5VTE6-2|ANGEL2	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3648559451103	2	540.362985	1078.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.155	1	29.155	28.655	29.655	0								0	0	0	0.66031	1	12203	12203		3.9444	2.2918	1				36776	61	18254	18332	42866	42866					0.17520929338934366
VGLVLLLQPL	10	Unmodified	_VGLVLLLQPL_					0	0	0		ENSG00000013523|ENST00000251089|ANGEL1	ENSG00000013523|ENST00000251089|ANGEL1	ENSG00000013523|ENST00000251089|ANGEL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0693237185478	3	355.574116	1063.70052	-1.8552	-0.00065966	3.4546	0.0012284	1.5994	0.0005687	355.5754356190809	22.734	0.14514	22.734	22.635	22.78	0					6	4	2	0	0	0	0.12561	1	9445	9445		0	0	1	843420			36777	584	18255	18333	42867	42867					0.17121526964660916
VGLVPLKA	8	Unmodified	_VGLVPLKA_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.7700988650322	2	398.768189	795.521825	0.46819	0.0001867	3.3384	0.0013312	3.8066	0.0015179	398.76936856018426	16.479	0.37022	16.63	16.324	16.694	0.15093					25	13	2	0	0	0	0.89008	1	6754	6754		2.5775	0	1	3255400			36778	3552	18256	18334	42868	42868					0.11588482116405885
VGLVPLKA	8	Unmodified	_VGLVPLKA_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	398.7697326540947	2	398.768189	795.521825	-0.21749	-8.6728E-05	3.6296	0.0014474	3.4121	0.0013606	398.76925435900586	15.783	0.13048	16.609	16.551	16.681	0.82643					17	11	2	0	0	0	0.89008	1	6567	6567		2.5775	0	1	2196700			36779	3552	18256	18334	42869	42869					0.11588482116405885
VGLVPLKA	8	Unmodified	_VGLVPLKA_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	398.7688781619072	2	398.768189	795.521825	0.08278	3.301E-05	2.4336	0.00097045	2.5164	0.0010035	398.7688552553157	15.508	0.12886	16.547	16.458	16.587	1.0392					19	9	3	0	0	0	0.89008	1	6433	6433		2.5775	0	1	5846300			36780	3552	18256	18334	42870	42870					0.11588482116405885
VGLVPLKA	8	Unmodified	_VGLVPLKA_					0	0	0		nc|ENSG00000160282|O95954-3|FTCD;ENSG00000160282|ENST00000397746|FTCD;nc|ENSG00000160282|O95954-2|FTCD	nc|ENSG00000160282|O95954-3|FTCD	nc|ENSG00000160282|O95954-3|FTCD	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	398.768189	795.521825	-0.23989	-9.566E-05	2.2861	0.00091161	2.0462	0.00081595	398.7689411233633	15.65	0.13436	16.476	16.375	16.509	0.82643	-0.035284	-5.1157E-05	NaN	2.5775	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2285200			36781	3552	18256	18334							0.11588482116405885
VGLVQSHLTR	10	Unmodified	_VGLVQSHLTR_					0	0	0		nc|ENSG00000100034|P49593-2|PPM1F;ENSG00000100034|ENST00000263212|PPM1F	nc|ENSG00000100034|P49593-2|PPM1F	nc|ENSG00000100034|P49593-2|PPM1F	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1017333865166	3	370.552374	1108.63529	1.4846	0.00055012	4.0975	0.0015183	5.5821	0.0020685	370.55462756073763	45.016	0.34736	46.975	46.799	47.146	1.9596					16	10	2	0	0	0	0.1256	1	18902	18902		0.12286	0	1	1244800			36782	1231	18257	18335	42871	42871					0.08531925491502079
VGLVWILKHF	10	Unmodified	_VGLVWILKHF_					0	0	0			REV__ENST00000344096.3_1_12:68052792-68052999:+|nuORF	REV__ENST00000344096.3_1_12:68052792-68052999:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	607.2131225466728	2	606.368601	1210.72265	4.1075	0.0024907	1.696	0.0010284	5.8035	0.0035191	606.3697585425799	91.119	0.28513	92.101	91.942	92.227	0.98157					16	8	3	0	0	0	0.12554	1	38410	38410		1.8442	0.19162	1	536680	+		36783	12515	18258	18336	42872	42872					0.12571751433074496
VGLWRSKLSPL	11	Unmodified	_VGLWRSKLSPL_					0	0	0			REV__ENST00000377601.2_1_9:42368363-42368396:+|nuORF	REV__ENST00000377601.2_1_9:42368363-42368396:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3164855837822	3	419.255557	1254.74484	2.0517	0.00086018	2.4823	0.0010407	4.534	0.0019009	419.25689481899303	42.322	0.18434	42.642	42.513	42.697	0.32058					7	5	2	0	0	0	0.14606	1	17760	17760		0.50596	0	1	527650	+		36784	12732	18259	18337	42873	42873					0.1276593111085731
VGLWRSLPL	9	Unmodified	_VGLWRSLPL_					0	0	0			REV__ENST00000557925.1_1_19:8315741-8320784:+|nuORF	REV__ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.5471984744072	3	347.54656	1039.61785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.148	1	43.148	42.648	43.648	0								0	0	0	0.42693	1	18064	18064		4.1895	0	1		+		36785	13877	18260	18338	42874	42874					0.09962629956521596
VGLWRWRRP	9	Unmodified	_VGLWRWRRP_					0	0	0			REV__ENST00000338745.10_3_3:18465897-18466173:-|nuORF	REV__ENST00000338745.10_3_3:18465897-18466173:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	613.3608886599541	2	613.356891	1224.69923	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.437	1	78.746	78.246	79.246	0.30933								0	0	0	0.42693	1	32793	32793		0.6015	0.076735	1		+		36786	12483	18261	18339	42875	42875					0.09586750439098068
VGLWWPRLSDI	11	Unmodified	_VGLWWPRLSDI_					0	0	0		ENST00000458385.6_1_4:186112325-186125079:-|nuORF	ENST00000458385.6_1_4:186112325-186125079:-|nuORF	ENST00000458385.6_1_4:186112325-186125079:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	447.9157287478447	3	447.915312	1340.72411	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.33	1	38.33	37.83	38.83	0								0	0	0	0.63775	1	16067	16067		0.50596	0.051438	1				36787	6655	18262	18340	42876	42876					0.06737340731183394
VGLYEKYK	8	Unmodified	_VGLYEKYK_					0	0	0			REV__tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	REV__tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2795593142509	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.496	1	34.496	33.996	34.996	0								0	0	0	1.0178	1	14460	14460		5.7604	0	1		+		36788	15643	18263	18341	42877	42877					0.04435242074328016
VGLYEKYK	8	Unmodified	_VGLYEKYK_					0	0	0			REV__tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	REV__tr|A0A7D6ZGY8|A0A7D6ZGY8_9CLOTMetal-dependentcarboxypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00665PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2796203494072	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.786	1	34.786	34.286	35.286	0								0	0	0	1.0178	1	14580	14580		5.7604	0	1		+		36789	15643	18263	18341	42878	42878					0.04435242074328016
VGLYKKLW	8	Unmodified	_VGLYKKLW_					0	0	0			REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.8104736208916	2	503.807845	1005.60114	1.617	0.00081467	2.5313	0.0012753	4.1484	0.00209	503.80920132773235	69.878	0.25512	69.878	69.738	69.993	0					11	7	2	0	0	0	0.89176	1	29136	29136		0.79363	0	1	261990	+		36790	14899	18264	18342	42879	42879					0.09856129070544739
VGLYKKLW	8	Unmodified	_VGLYKKLW_					0	0	0			REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	503.8112670779228	2	503.807845	1005.60114	1.7682	0.00089082	3.3301	0.0016778	5.0983	0.0025686	503.8096116173656	69.652	0.21919	69.974	69.878	70.097	0.32223					11	6	2	0	0	0	0.89176	1	29183	29183		0.79363	0	1	426130	+		36791	14899	18264	18342	42880	42880					0.09856129070544739
VGLYKKLW	8	Unmodified	_VGLYKKLW_					0	0	0			REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	503.807845	1005.60114	1.617	0.00081467	2.5313	0.0012753	4.1484	0.00209	503.80920132773235	69.878	0.25512	69.878	69.738	69.993	0	-0.048002	-0.00056833	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	261990	+		36792	14899	18264	18342							0.09856129070544739
VGLYKKLW	8	Unmodified	_VGLYKKLW_					0	0	0			REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	REV__tr|A0A553SJE1|A0A553SJE1_NIACIRodshape-determiningproteinRodAOS=NialliacirculansOX=1397GN=rodAPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	503.807845	1005.60114	1.7682	0.00089082	3.3301	0.0016778	5.0983	0.0025686	503.8096116173656	69.652	0.21919	69.974	69.878	70.097	0.32223	0.048002	0.00023655	NaN	0.79363	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	426130	+		36793	14899	18264	18342							0.09856129070544739
VGLYSFFLA	9	Unmodified	_VGLYSFFLA_					0	0	0			REV__tr|A0A553SMH1|A0A553SMH1_NIACIM50familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_22565PE=4SV=1	REV__tr|A0A553SMH1|A0A553SMH1_NIACIM50familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_22565PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1016.546130359173	1	1016.54515	1015.53787	2.8179	0.0028645	3.1102	0.0031616	5.928	0.0060261	1016.5471950229492	74.569	0.35042	76.351	76.131	76.481	1.7817					22	10	3	0	0	0	0.20838	1	31273	31273		32.117	11.246	1	1453500	+		36794	15020	18265	18343	42881	42881					0.03072143562656038
VGLYSFFLA	9	Unmodified	_VGLYSFFLA_					0	0	0			REV__tr|A0A553SMH1|A0A553SMH1_NIACIM50familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_22565PE=4SV=1	REV__tr|A0A553SMH1|A0A553SMH1_NIACIM50familypeptidaseOS=NialliacirculansOX=1397GN=CEQ21_22565PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1016.54515	1015.53787	2.8179	0.0028645	3.1102	0.0031616	5.928	0.0060261	1016.5471950229492	74.569	0.35042	76.351	76.131	76.481	1.7817	0.011668	-0.00059738	NaN	32.117	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1453500	+		36795	15020	18265	18343							0.03072143562656038
VGLYYWITL	9	Unmodified	_VGLYYWITL_					0	0	0			REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.3116332888603	2	564.310418	1126.60628	1.6114	0.0009093	-2.3644	-0.0013342	-0.75301	-0.00042493	564.309244847725	58.894	0.28508	58.894	58.752	59.037	0					11	8	2	0	0	0	0.54523	1	24573	24573		13.508	0.97634	1	484910	+		36796	8264	18266	18344	42882	42882					0.04804388142520111
VGLYYWITL	9	Unmodified	_VGLYYWITL_					0	0	0			REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	564.310418	1126.60628	1.6114	0.0009093	-2.3644	-0.0013342	-0.75301	-0.00042493	564.309244847725	58.894	0.28508	58.894	58.752	59.037	0	0.090198	0.00012399	NaN	13.508	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	484910	+		36797	8264	18266	18344							0.04804388142520111
VGLYYWITL	9	Unmodified	_VGLYYWITL_					0	0	0			REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	REV__chr16:15105618-15106115|342|202.17|0.0|24.27|-|1|None,PKD1P6-NPIPP1|1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	564.310418	1126.60628	2.3603	0.0013319	-2.5273	-0.0014262	-0.16701	-9.4246E-05	564.3090570940226	58.391	0.18888	58.714	58.619	58.808	0.32298	-0.090198	-5.9858E-05	NaN	13.508	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	589780	+		36798	8264	18266	18344							0.04804388142520111
VGMAGHPG	8	Unmodified	_VGMAGHPG_					0	0	0		PBX1|p.D45Tfs*7|1|0.16|ENSG00000185630|chr1:164559954-164559954|A/-|frameshift_variant;nc|ENSG00000185630|P40424-2|PBX1;nc|ENSG00000185630|P40424-3|PBX1;ENSG00000185630|ENST00000420696|PBX1	PBX1|p.D45Tfs*7|1|0.16|ENSG00000185630|chr1:164559954-164559954|A/-|frameshift_variant	PBX1|p.D45Tfs*7|1|0.16|ENSG00000185630|chr1:164559954-164559954|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.1719238162041	2	363.173598	724.332644	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9748	1	8.9748	8.4748	9.4748	0								0	0	0	1.0178	1	3693	3693		0.79363	0	1				36799	4754	18267	18345	42883	42883					-0.040549134485672766
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	403.1807433962822	2	403.22108	804.427607	-0.59766	-0.00024099	-2.7694	-0.0011167	-3.3671	-0.0013577	403.21908488538236	20.438	0.55943	20.438	20.165	20.724	0					23	17	2	0	0	0	2.3239	1	8595	8595		0.69038	0	1	383790	+		36800	15097	18268	18346	42884	42884					0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	403.1809875369072	2	403.22108	804.427607	-0.55477	-0.0002237	-2.6422	-0.0010654	-3.197	-0.0012891	403.2192372979358	21.248	1.0233	21.248	20.974	21.997	0					50	32	2	0	0	0	2.3239	1	8762	8762		0.69038	0	1	701820	+		36801	15097	18268	18346	42885	42885					0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	403.22108	804.427607	0.76114	0.00030691	-5.3627	-0.0021623	-4.6015	-0.0018554	403.21818577106285	21.028	0.76517	21.238	20.853	21.618	0.21024	0.0077611	-0.0003685	NaN	0.69038	60	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	921910	+		36802	15097	18268	18346							0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	403.22108	804.427607	0.70964	0.00028614	-4.0447	-0.0016309	-3.3351	-0.0013448	403.218644247657	20.079	0.55767	20.29	20.009	20.567	0.21024	0.10998	-0.0002117	NaN	0.69038	33	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	342670	+		36803	15097	18268	18346							0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	403.22108	804.427607	0.45253	0.00018247	-5.309	-0.0021407	-4.8565	-0.0019582	403.21831651866506	20.156	0.78745	21.282	20.924	21.712	1.1254	0.05141	-0.00032522	NaN	0.69038	47	25	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	899750	+		36804	15097	18268	18346							0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	403.22108	804.427607	0.29269	0.00011802	-3.6498	-0.0014717	-3.3571	-0.0013537	403.219365878175	18.962	0.72049	20.021	19.85	20.571	1.0585	-0.15884	0.00010681	NaN	0.69038	32	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1766200	+		36805	15097	18268	18346							0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	403.22108	804.427607	0.28089	0.00011326	-5.1707	-0.0020849	-4.8898	-0.0019717	403.2180624673997	19.63	0.8171	21.153	20.832	21.649	1.5237	-0.076947	-0.00021368	NaN	0.69038	48	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1005000	+		36806	15097	18268	18346							0.017570200226373345
VGMASGRK	8	Unmodified	_VGMASGRK_					0	0	0			REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	REV__tr|A0A553SPP7|A0A553SPP7_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_26750PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	403.22108	804.427607	0.23636	9.5306E-05	-3.9694	-0.0016005	-3.733	-0.0015052	403.2192215159784	18.522	0.70241	19.97	19.817	20.52	1.448	-0.20974	-0.00015092	NaN	0.69038	38	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1442600	+		36807	15097	18268	18346							0.017570200226373345
VGMELIED	8	Unmodified	_VGMELIED_					0	0	0			REV__tr|A0A7D7A581|A0A7D7A581_9CLOTArgininosuccinatesynthaseOS=ClostridiumintestinaleOX=36845GN=argGPE=3SV=1	REV__tr|A0A7D7A581|A0A7D7A581_9CLOTArgininosuccinatesynthaseOS=ClostridiumintestinaleOX=36845GN=argGPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	302.1958495974541	3	302.481005	904.421184	-3.5682	-0.0010793	0.60861	0.00018409	-2.9595	-0.0008952	302.4811559238154	10.794	0.36786	10.794	10.649	11.016	0					16	11	2	0	0	0	2.3239	1	4518	4518		0	0	1	206070	+		36808	15880	18269	18347	42886	42886					-0.03484962719403484
VGMHGLLV	8	Unmodified	_VGMHGLLV_					0	0	0			REV__ENST00000588283.1_2_17:73910154-73910367:-|nuORF	REV__ENST00000588283.1_2_17:73910154-73910367:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	414.0617553591728	2	413.236199	824.457844	1.8732	0.00077409	-1.8547	-0.00076644	0.018517	7.6518E-06	413.23473398566875	39.936	0.18505	40.249	40.196	40.381	0.31263					7	5	2	0	0	0	2.3239	1	16838	16838		0	0	1	375710	+		36809	14043	18270	18348	42887	42887					0.03859378687809567
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2290527224541	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.02	1	40.02	39.52	40.52	0								0	0	0	1.0178	1	16771	16771		2.0598	1.2661	1				36810	16600	18271	18349	42888	42888					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2280456423759	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.984	1	40.984	40.484	41.484	0								0	0	0	1.0178	1	17166	17166		2.0598	1.2661	1				36811	16600	18271	18349	42889	42889					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2282287478447	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.472	1	24.714	24.214	25.214	0.24251								0	0	0	1.0178	1	10213	10213		2.0598	1.2661	1				36812	16600	18271	18349	42890	42890					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2287170290947	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.585	1	24.828	24.328	25.328	0.24251								0	0	0	1.0178	1	10262	10262		2.0598	1.2661	1				36813	16600	18271	18349	42891	42891					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2285644412041	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.349	1	31.64	31.14	32.14	0.29086								0	0	0	1.0178	1	13159	13159		2.0598	1.2661	1				36814	16600	18271	18349	42892	42892					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2271911501884	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.385	1	37.69	37.19	38.19	0.30497								0	0	0	1.0178	1	15724	15724		2.0598	1.2661	1				36815	16600	18271	18349	42893	42893					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2283203005791	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.516	1	37.821	37.321	38.321	0.30497								0	0	0	1.0178	1	15779	15779		2.0598	1.2661	1				36816	16600	18271	18349	42894	42894					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2281371951103	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.56	1	42.881	42.381	43.381	0.32058								0	0	0	1.0178	1	17877	17877		2.0598	1.2661	1				36817	16600	18271	18349	42895	42895					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2300903201103	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.681	1	28.96	28.46	29.46	1.2789								0	0	0	1.0178	1	11600	11600		2.0598	1.2661	1				36818	16600	18271	18349	42896	42896					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2295410037041	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.841	1	29.12	28.62	29.62	1.2789								0	0	0	1.0178	1	11667	11667		2.0598	1.2661	1				36819	16600	18271	18349	42897	42897					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2295104861259	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.199	1	29.478	28.978	29.978	1.2789								0	0	0	1.0178	1	11821	11821		2.0598	1.2661	1				36820	16600	18271	18349	42898	42898					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2276794314384	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.029	1	41.339	40.839	41.839	1.3102								0	0	0	1.0178	1	16790	16790		2.0598	1.2661	1				36821	16600	18271	18349	42899	42899					0.021253065396763304
VGMKGSRP	8	Unmodified	_VGMKGSRP_					0	0	0		tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	tr|A0A553SSA8|A0A553SSA8_NIACIAcetolactatesynthaseAlsSOS=NialliacirculansOX=1397GN=alsSPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2285339236259	2	416.228905	830.443257	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.173	1	41.483	40.983	41.983	1.3102								0	0	0	1.0178	1	16851	16851		2.0598	1.2661	1				36822	16600	18271	18349	42900	42900					0.021253065396763304
VGMLNGGR	8	Unmodified	_VGMLNGGR_					0	0	0		ENSG00000107651|ENST00000369075|SEC23IP	ENSG00000107651|ENST00000369075|SEC23IP	ENSG00000107651|ENST00000369075|SEC23IP	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1801330447197	2	402.213255	802.411957	1.059	0.00042593	2.4664	0.00099201	3.5253	0.0014179	402.2139707508199	67.24	0.2406	69.129	68.986	69.227	1.8889					10	7	2	0	0	0	2.3239	1	28196	28196		0	0	1	626240			36823	1604	18272	18350	42901	42901					0.0028473350560034305
VGMMSAQM	8	Unmodified	_VGMMSAQM_					0	0	0			REV__ENSG00000084070|ENST00000372718|SMAP2	REV__ENSG00000084070|ENST00000372718|SMAP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.3575927615166	1	854.356892	853.349616	1.2694	0.0010845	0.82323	0.00070334	2.0926	0.0017879	854.3571405576064	98.78	0.24715	98.78	98.66	98.907	0					21	8	4	0	0	0	0.88958	1	41307	41307		2.8892	0.31174	1	214540000	+		36824	8838	18273	18351	42902	42902					-0.0829249694926375
VGMRLRRVI	9	Unmodified	_VGMRLRRVI_					0	0	0		tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	tr|A0A553SKP4|A0A553SKP4_NIACIFlotillin-likeproteinFloAOS=NialliacirculansOX=1397GN=floAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2194091677666	2	550.347677	1098.6808	3.2055	0.0017641	1.2194	0.00067108	4.4249	0.0024352	550.3489821937028	91.696	0.41594	93.022	92.766	93.182	1.3269					19	12	2	0	0	0	0.11787	1	38583	38583		5.2307	0.90143	1	707360			36825	16300	18274	18352	42903	42903					0.1354087247291318
VGMTLFLLYF	10	Unmodified	_VGMTLFLLYF_					0	0	0		CLEC5A|p.Q155Gfs*13|1|0.06|ENSG00000258227|chr7:141930208-141930209|-/CC|frameshift_variant;nc|ENSG00000258227|Q9NY25-2|CLEC5A;ENSG00000258227|ENST00000546910|CLEC5A	CLEC5A|p.Q155Gfs*13|1|0.06|ENSG00000258227|chr7:141930208-141930209|-/CC|frameshift_variant	CLEC5A|p.Q155Gfs*13|1|0.06|ENSG00000258227|chr7:141930208-141930209|-/CC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	602.3277465701103	2	602.327753	1202.64095	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.653	1	68.653	68.153	69.153	0								0	0	0	0.66155	1	28590	28590		1.8442	0	1				36826	314	18275	18353	42904	42904					0.04773887958981504
VGNANNRGVL	10	Unmodified	_VGNANNRGVL_					0	0	0			REV__ENSG00000120054|ENST00000370418|CPN1	REV__ENSG00000120054|ENST00000370418|CPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.2809936404228	2	507.277972	1012.54139	2.8687	0.0014552	2.4226	0.0012289	5.2913	0.0026841	507.27959451715003	86.22	0.44865	86.472	86.25	86.699	0.25227					33	14	3	0	0	0	0.89803	1	36093	36093		1.6526	0.85899	1	2092900	+	+	36827	8387	18276	18354	42905	42905					0.03562206389244693
VGNAPLLA	8	Unmodified	_VGNAPLLA_					0	0	0		nc|ENSG00000153827|Q14669-4|TRIP12;TRIP12-MFI2|1|fusion;nc|ENSG00000153827|Q14669|TRIP12;nc|ENSG00000153827|Q14669-2|TRIP12;nc|ENSG00000153827|Q14669-3|TRIP12;ENSG00000153827|ENST00000675903|TRIP12;ENST00000461189.1_1_2:230659893-230661399:-|nuORF	nc|ENSG00000153827|Q14669-4|TRIP12	nc|ENSG00000153827|Q14669-4|TRIP12	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.5949584841728	2	377.726521	753.438489	1.9	0.00071768	-3.1542	-0.0011914	-1.2542	-0.00047375	377.7250908607165	64.181	0.46539	65.588	65.305	65.77	1.4071					34	14	3	0	0	0	2.3239	1	26800	26800		2.8892	0	1	8389600			36828	3366	18277	18355	42906	42906					0.05190745668562613
VGNEQCDEGD	10	Unmodified	_VGNEQCDEGD_					0	0	0			REV__nc|ENSG00000108576|P31645-2|SLC6A4	REV__nc|ENSG00000108576|P31645-2|SLC6A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1929809451103	2	533.19311	1064.37167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.252	1	61.221	60.721	61.721	1.969								0	0	0	0.66176	1	24858	24858		1.4819	0.68827	1		+		36829	9258	18278	18356	42907	42907					-0.15794322466149424
VGNEQCDEGD	10	Unmodified	_VGNEQCDEGD_					0	0	0			REV__nc|ENSG00000108576|P31645-2|SLC6A4	REV__nc|ENSG00000108576|P31645-2|SLC6A4	MSMS	GG20161007_CRH_Patient100_W632_02	4	533.1972534060478	2	533.19311	1064.37167	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.94	1	100.15	99.653	100.65	0.21387								0	0	0	0.66176	1	42031	42031		1.4819	0.8804	1		+		36830	9258	18278	18356	42908	42908					-0.15794322466149424
VGNGCGVD	8	Unmodified	_VGNGCGVD_					0	0	0			REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	720.3016845583916	1	720.298115	719.290839	1.4099	0.0010156	2.5381	0.0018282	3.948	0.0028437	720.298784587376	99.278	0.17979	99.278	99.171	99.35	0					9	5	2	0	0	0	0.89008	1	41569	41569		2.5775	1.7838	1	1187600	+		36831	15706	18279	18357	42909	42909					-0.08003513927747008
VGNGCGVD	8	Unmodified	_VGNGCGVD_					0	0	0			REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	720.298115	719.290839	1.4099	0.0010156	2.5381	0.0018282	3.948	0.0028437	720.298784587376	99.278	0.17979	99.278	99.171	99.35	0	-0.018561	-0.00058806	NaN	2.5775	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1187600	+		36832	15706	18279	18357							-0.08003513927747008
VGNGCGVD	8	Unmodified	_VGNGCGVD_					0	0	0			REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	REV__tr|A0A7D6ZSG2|A0A7D6ZSG2_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07625PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	720.298115	719.290839	2.7075	0.0019502	4.1375	0.0029802	6.845	0.0049304	720.301386339841	99.235	0.18387	99.315	99.176	99.36	0.080376	0.018561	0.000564	NaN	2.5775	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1172900	+		36833	15706	18279	18357							-0.08003513927747008
VGNIAKYDI	9	Unmodified	_VGNIAKYDI_					0	0	0		ENSG00000249437|ENST00000517649|NAIP;ENST00000519014.1_1_5:70307584-70316500:-|nuORF	ENSG00000249437|ENST00000517649|NAIP	ENSG00000249437|ENST00000517649|NAIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7756835818291	2	496.7742	991.533846	2.23	0.0011078	-0.32238	-0.00016015	1.9076	0.00094763	496.77431212102965	70.126	0.4166	71.963	71.751	72.167	1.8378					37	12	4	0	0	0	0.68551	1	29476	29476		7.9102	0.62092	1	6384800			36834	5374	18280	18358	42910	42910					0.037740540689469526
VGNKADLDH	9	Unmodified	_VGNKADLDH_					0	0	0		nc|ENSG00000134533|Q96A58-2|RERG;ENSG00000134533|ENST00000256953|RERG	nc|ENSG00000134533|Q96A58-2|RERG	nc|ENSG00000134533|Q96A58-2|RERG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7433654665947	2	484.743431	967.472308	1.1666	0.0005655	-1.1515	-0.0005582	0.015073	7.3066E-06	484.7430231169829	26.191	0.29952	26.191	26.057	26.357	0					24	9	3	0	0	0	0.82604	1	10968	10968		2.3027	0	1	2986900			36835	2622	18281	18359	42911	42911					-0.012728776303561062
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2495300173759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.501	1	23.734	23.234	24.234	0.23306								0	0	0	0.66218	1	9801	9801		0.77653	0.27058	1		+		36836	8470	18282	18360	42912	42912					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2500182986259	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.749	1	23.992	23.492	24.492	0.24251								0	0	0	0.66218	1	9904	9904		0.77653	0.50751	1		+		36837	8470	18282	18360	42913	42913					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507202029228	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.735	1	17.633	17.133	18.133	0.89794								0	0	0	0.66218	1	6961	6961		0.77653	0.36827	1		+		36838	8470	18282	18360	42914	42914					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2503539919853	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.855	1	17.753	17.253	18.253	0.89794								0	0	0	0.66218	1	7013	7013		0.77653	0.36827	1		+		36839	8470	18282	18360	42915	42915					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.066	1	17.964	17.464	18.464	0.89794								0	0	0	0.66218	1	7103	7103		0.77653	0.32202	1		+		36840	8470	18282	18360	42916	42916					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2502014040947	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.219	1	18.117	17.617	18.617	0.89794								0	0	0	0.66218	1	7167	7167		0.77653	0.50751	1		+		36841	8470	18282	18360	42917	42917					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2515136599541	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.59	1	19.569	19.069	20.069	0.97922								0	0	0	0.66218	1	7744	7744		0.77653	0.50751	1		+		36842	8470	18282	18360	42918	42918					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2505981326103	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.351	1	20.409	19.909	20.909	1.0585								0	0	0	0.66218	1	8061	8061		0.77653	0.078866	1		+		36843	8470	18282	18360	42919	42919					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505065798759	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.502	1	11.263	10.763	11.763	0.76165								0	0	0	0.66218	1	4367	4367		0.77653	0.50751	1		+		36844	8470	18282	18360	42920	42920					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2492248415947	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.394	1	16.433	15.933	16.933	1.0392								0	0	0	0.66218	1	6386	6386		0.77653	0	1		+		36845	8470	18282	18360	42921	42921					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2500793337822	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.258	1	17.297	16.797	17.797	1.0392								0	0	0	0.66218	1	6750	6750		0.77653	0	1		+		36846	8470	18282	18360	42922	42922					0.14134698402403956
VGNKRKRQIP	10	Unmodified	_VGNKRKRQIP_					0	0	0			REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	REV__EGFLAM|p.G332R|1|0.42|ENSG00000164318|chr5:38406993-38406993|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2496215701103	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.045	1	19.493	18.993	19.993	1.448								0	0	0	0.66218	1	7500	7500		0.77653	0	1		+		36847	8470	18282	18360	42923	42923					0.14134698402403956
VGNKRWTIRVP	11	Unmodified	_VGNKRWTIRVP_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2004272341728	4	332.200473	1324.77279	-2.0621	-0.00068502	3.4792	0.0011558	1.4171	0.00047078	332.2015453961548	35.796	0.42078	35.796	35.558	35.979	0					50	30	2	0	0	0	1.0254	1	14971	14971		2.2527	0.79761	1	7440200	+		36848	11124	18283	18361	42924	42924					0.12339254090920804
VGNKRWTIRVP	11	Unmodified	_VGNKRWTIRVP_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2013122439384	4	332.200473	1324.77279	0.83685	0.000278	1.4441	0.00047972	2.2809	0.00075772	332.20084757715097	35.378	0.1312	35.678	35.6	35.731	0.29942					18	9	2	0	0	0	1.0254	1	14853	14853		2.2527	0.79761	1	2634700	+		36849	11124	18283	18361	42925	42925					0.12339254090920804
VGNKRWTIRVP	11	Unmodified	_VGNKRWTIRVP_					0	0	0			REV__ENSG00000174498|ENST00000327987|IGDCC3	REV__ENSG00000174498|ENST00000327987|IGDCC3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	332.200473	1324.77279	0.26514	8.808E-05	-0.1097	-3.6442E-05	0.15544	5.1639E-05	332.20033666616655	33.631	0.061302	35.454	35.435	35.497	1.8227	-0.18865	-0.0030585	NaN	2.2527	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11165000	+		36850	11124	18283	18361							0.12339254090920804
VGNKTTIRI	9	Unmodified	_VGNKTTIRI_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	501.9702941775322	2	501.308741	1000.60293	3.2069	0.0016077	-0.41292	-0.000207	2.794	0.0014007	501.3082621535597	91.516	0.41954	91.707	91.529	91.949	0.19042					22	12	2	0	0	0	0.11833	1	38262	38262		0.45834	0	1	1514700			36851	3065	18284	18362	42926	42926					0.10265138088493586
VGNKTTIRI	9	Unmodified	_VGNKTTIRI_					0	0	0		nc|ENSG00000144057|Q96JF0-2|ST6GAL2;ENSG00000144057|ENST00000409382|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	nc|ENSG00000144057|Q96JF0-2|ST6GAL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	501.308741	1000.60293	4.2068	0.0021089	0.88635	0.00044434	5.0932	0.0025533	501.3092811614963	90.783	0.38441	91.765	91.622	92.006	0.98157	0.020333	0.00037202	NaN	0.45834	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1118300			36852	3065	18284	18362							0.10265138088493586
VGNLYLIPLLH	11	Unmodified	_VGNLYLIPLLH_					0	0	0			REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	REV__DLG5|p.K1005Gfs*109|1|0.22|ENSG00000151208|chr10:77821432-77821471|TTCTGGGAGGTTTTGGGGGTGTCAGAGGCCCCGCCCTCTT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9213439822197	3	417.920174	1250.73869	0.30478	0.00012737	3.3325	0.0013927	3.6373	0.0015201	417.92121231746313	31.093	0.63732	31.093	30.928	31.565	0					68	20	4	0	0	0	1.0357	1	13177	13177		0.50596	0	1	7414100	+		36853	8445	18285	18363	42927	42927					0.12335412879338037
VGNPLVIL	8	Unmodified	_VGNPLVIL_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7674133181572	2	412.765646	823.516739	0.90056	0.00037172	2.5749	0.0010628	3.4754	0.0014345	412.76704478847023	22.021	0.44399	22.244	21.992	22.436	0.223					19	14	2	0	0	0	0.89008	1	9174	9174		2.5775	0	1	1795300	+		36854	9120	18286	18364	42928	42928					0.09792178253815109
VGNPLVIL	8	Unmodified	_VGNPLVIL_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.765646	823.516739	-0.23526	-9.7107E-05	3.9795	0.0016426	3.7443	0.0015455	412.7673435255581	22.486	0.33371	22.486	22.214	22.548	0	0.18066	0.00092601	NaN	2.5775	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1669200	+		36855	9120	18286	18364							0.09792178253815109
VGNPLVIL	8	Unmodified	_VGNPLVIL_					0	0	0			REV__ENSG00000103742|ENST00000352385|IGDCC4	REV__ENSG00000103742|ENST00000352385|IGDCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.765646	823.516739	0.90056	0.00037172	2.5749	0.0010628	3.4754	0.0014345	412.76704478847023	22.021	0.44399	22.244	21.992	22.436	0.223	-0.061439	-0.00023359	NaN	2.5775	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1795300	+		36856	9120	18286	18364							0.09792178253815109
VGNRDRAR	8	Unmodified	_VGNRDRAR_					0	0	0		ENST00000494263.5_1_2:219646539-219646824:+|nuORF	ENST00000494263.5_1_2:219646539-219646824:+|nuORF	ENST00000494263.5_1_2:219646539-219646824:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1771728396416	3	315.17753	942.51076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2611	1	3.0095	2.5095	3.5095	0.7484								0	0	0	1.0178	1	937	937		0.45834	0	1				36857	6935	18287	18365	42929	42929					0.03720472794839225
VGNVHLHL	8	Unmodified	_VGNVHLHL_					0	0	0			REV__ENST00000576794.5_1_17:7221531-7221930:-|nuORF	REV__ENST00000576794.5_1_17:7221531-7221930:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1209289431572	2	444.756144	887.497735	2.2406	0.00099654	1.6677	0.0007417	3.9083	0.0017382	444.75730729303115	47.564	0.26299	47.895	47.756	48.019	0.33034					14	8	2	0	0	0	2.3239	1	19976	19976		0	0	1	463230	+		36858	11865	18288	18366	42930	42930					0.04948641682756261
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7677795290947	2	412.765646	823.516739	0.9343	0.00038565	1.9907	0.00082167	2.925	0.0012073	412.76694871463184	22.65	0.54106	22.884	22.741	23.282	0.23306					25	17	2	0	0	0	0.89008	1	9409	9409		2.5775	0	1	2040400	+		36859	10079	18289	18367	42931	42931					0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2665283083916	2	412.765646	823.516739	0.73551	0.00030359	1.8558	0.00076601	2.5913	0.0010696	412.7668122589092	21.061	0.29168	22.186	22.013	22.305	1.1254					16	9	2	0	0	0	0.89008	1	8755	8755		2.5775	0	1	1097800	+		36860	10079	18289	18367	42932	42932					0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	413.2665283083916	2	412.765646	823.516739	0.73551	0.00030359	1.8558	0.00076601	2.5913	0.0010696	412.7668122589092	21.061	0.29168	22.186	22.013	22.305	1.1254					16	9	2	0	0	0	2.3239	1	8755	8755		2.5775	0	1	1097800	+		36861	10079	18289	18367	42933	42933					0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.7684814333916	2	412.765646	823.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.583	1	22.158	21.658	22.658	1.5748								0	0	0	1.0178	1	8564	8564		5.2307	0	1		+		36862	10079	18289	18367	42934	42934					0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	412.765646	823.516739	-0.21376	-8.8231E-05	4.8246	0.0019914	4.6109	0.0019032	412.7677187303089	22.913	0.23589	22.913	22.78	23.016	0	0.042179	0.00096475	NaN	2.5775	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2706700	+		36863	10079	18289	18367							0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.765646	823.516739	0.9343	0.00038565	1.9907	0.00082167	2.925	0.0012073	412.76694871463184	22.65	0.54106	22.884	22.741	23.282	0.23306	0.01258	-0.0013748	NaN	2.5775	25	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2040400	+		36864	10079	18289	18367							0.09792178253815109
VGNVLPLL	8	Unmodified	_VGNVLPLL_					0	0	0			REV__ENSG00000138767|ENST00000504123|CNOT6L	REV__ENSG00000138767|ENST00000504123|CNOT6L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	412.765646	823.516739	0.40468	0.00016704	3.0633	0.0012644	3.468	0.0014315	412.7674816074746	21.27	0.54044	22.845	22.681	23.222	1.5748	-0.025793	-0.00048925	NaN	2.5775	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2577300	+		36865	10079	18289	18367							0.09792178253815109
VGNWLWSQLES	11	Unmodified	_VGNWLWSQLES_					0	0	0			REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|46|2|anti-sense	REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|46|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	659.8248779177666	2	659.824952	1317.63535	2.2725	0.0014994	-1.0625	-0.00070107	1.21	0.00079837	659.8242186272463	81.529	1.1853	81.529	80.823	82.008	0					59	38	2	0	0	0	1.0214	1	33959	33959		2.4985	0.84587	1	1535400	+		36866	14359	18290	18368	42935	42935					-0.010761192991367352
VGPEGCGK	8	Unmodified	_VGPEGCGK_					0	0	0		DYNC2H1|p.T3293Hfs*3|1|0.15|ENSG00000187240|chr11:103243746-103243746|A/-|frameshift_variant;ENSG00000187240|ENST00000375735|DYNC2H1;nc|ENSG00000187240|Q8NCM8-2|DYNC2H1	DYNC2H1|p.T3293Hfs*3|1|0.15|ENSG00000187240|chr11:103243746-103243746|A/-|frameshift_variant	DYNC2H1|p.T3293Hfs*3|1|0.15|ENSG00000187240|chr11:103243746-103243746|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1003906130791	2	373.678714	745.342874	-1.6508	-0.00061687	-3.1962	-0.0011944	-4.847	-0.0018112	373.6778077280163	15.792	0.18766	15.792	15.682	15.87	0					9	5	2	0	0	0	2.3239	1	6566	6566		10.183	0	1	221340			36867	434	18291	18369	42936	42936					-0.03998350513973037
VGPGKKVAI	9	Unmodified	_VGPGKKVAI_					0	0	0		tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	868.5660278201103	1	868.561464	867.554188	3.0395	0.00264	0.47238	0.00041029	3.5119	0.0030503	868.5616877405465	109.35	0.46019	109.51	109.19	109.65	0.15898					56	21	5	0	0	0	0.82604	1	47532	47532		2.3027	1.5091	1	338740000			36868	16705	18292	18370	42937	42937					0.11511269519405687
VGPGKKVAI	9	Unmodified	_VGPGKKVAI_					0	0	0		tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	tr|A0A553SUS8|A0A553SUS8_NIACINAD(P)-dependentalcoholdehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_06320PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	868.561464	867.554188	1.1831	0.0010276	2.4831	0.0021568	3.6662	0.0031843	868.5638011029154	109.38	0.26063	109.38	109.22	109.48	0	-0.062481	0.0012018	NaN	2.3027	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29510000			36869	16705	18292	18370							0.11511269519405687
VGPGLLKE	8	Unmodified	_VGPGLLKE_					0	0	0			REV__ENST00000471989.5_1_17:40475518-40477070:-|nuORF	REV__ENST00000471989.5_1_17:40475518-40477070:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	812.4858276247978	1	812.48763	811.480354	1.8079	0.0014689	-3.1866	-0.002589	-1.3787	-0.0011202	812.4846407305049	78.49	0.34715	78.49	78.314	78.662	0					18	10	2	0	0	0	0.88958	1	32707	32707		2.8892	0	1	927130	+		36870	10918	18293	18371	42938	42938					0.06707301357084816
VGPGREECIHC	11	Unmodified	_VGPGREECIHC_					0	0	0		nc|ENSG00000140479|P29122-2|PCSK6;nc|ENSG00000140479|P29122-8|PCSK6;ENSG00000140479|ENST00000611716|PCSK6;nc|ENSG00000140479|P29122-7|PCSK6	nc|ENSG00000140479|P29122-2|PCSK6	nc|ENSG00000140479|P29122-2|PCSK6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0454589724541	3	400.514714	1198.52231	-0.59895	-0.00023989	3.1084	0.001245	2.5094	0.0010051	400.8493576077088	22.025	0.71233	22.025	21.719	22.432	0					36	22	2	0	0	0	0.14606	1	9313	9313		0.094841	0	1	484900			36871	2921	18294	18372	42939	42939					-0.06900834288353508
VGPGRVLRWPR	11	Unmodified	_VGPGRVLRWPR_					0	0	0			REV__nc|ENSG00000164125|Q6UWH4-3|GASK1B	REV__nc|ENSG00000164125|Q6UWH4-3|GASK1B	MSMS	GG20161007_CRH_Patient100_W632_01	3	646.8861572146416	2	646.888555	1291.76256	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.914	1	14.64	14.14	15.14	0.72639								0	0	0	0.63775	1	5779	5779		1.3295	0	1		+		36872	10719	18295	18373	42940	42940					0.12834691156353983
VGPIAPDL	8	Unmodified	_VGPIAPDL_					0	0	0			REV__ENSG00000105929|ENST00000310018|ATP6V0A4	REV__ENSG00000105929|ENST00000310018|ATP6V0A4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	781.4446899294853	1	781.445431	780.438155	1.5305	0.001196	-1.1916	-0.0009312	0.33888	0.00026482	781.4434716393143	68.505	0.27826	68.827	68.689	68.967	0.32224					11	8	2	0	0	0	0.89176	1	28715	28715		0.79363	0	1	730110	+		36873	9198	18296	18374	42941	42941					0.03915325948696591
VGPICLPELR	10	Unmodified	_VGPICLPELR_					0	0	0		nc|ENSG00000183378|Q7RTZ1|OVCH2;ENSG00000183378|ENST00000533663|OVCH2	nc|ENSG00000183378|Q7RTZ1|OVCH2	nc|ENSG00000183378|Q7RTZ1|OVCH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2122985720634	3	366.21096	1095.61105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.058	1	21.268	20.768	21.768	0.21024								0	0	0	0.66155	1	8747	8747		0.77653	0	1				36874	4651	18297	18375	42942	42942					0.06706949013596386
VGPIPSIVTMR	11	Unmodified	_VGPIPSIVTMR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3405639529228	2	585.339184	1168.66381	1.9026	0.0011136	-0.78708	-0.00046071	1.1155	0.00065293	585.338844360592	77.064	0.68742	77.064	76.814	77.502	0					55	21	4	0	0	0	0.34699	2	32090	32048;32090		28.495	9.2375	1	4367900	+		36875	13485	18298	18376	42943;42944	42944					0.08622907076460251
VGPIPSIVTMR	11	Unmodified	_VGPIPSIVTMR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	585.3392211794853	2	585.339184	1168.66381	2.0751	0.0012146	-1.4979	-0.00087681	0.57715	0.00033783	585.3382480159215	76.605	0.50751	76.927	76.694	77.201	0.32163					40	15	4	0	0	0	0.54794	1	32022	32022		22.658	4.5117	1	2055600	+		36876	13485	18298	18376	42945	42945					0.08622907076460251
VGPIPSIVTMR	11	Unmodified	_VGPIPSIVTMR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	585.339184	1168.66381	2.0751	0.0012146	-1.4979	-0.00087681	0.57715	0.00033783	585.3382480159215	76.605	0.50751	76.927	76.694	77.201	0.32163	0.056729	-0.00092724	NaN	28.495	40	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2055600	+		36877	13485	18298	18376							0.08622907076460251
VGPIPSIVTMR	11	Unmodified	_VGPIPSIVTMR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	585.339184	1168.66381	2.5044	0.0014659	1.5362	0.00089921	4.0406	0.0023651	585.3387343600087	75.468	0.18741	76.775	76.706	76.894	1.3063	-0.095399	0.0026248	NaN	28.495	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	783960	+		36878	13485	18298	18376							0.08622907076460251
VGPIPSIVTMR	11	Unmodified	_VGPIPSIVTMR_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	585.339184	1168.66381	2.7412	0.0016045	1.6961	0.00099278	4.4372	0.0025973	585.3392374558858	74.933	0.30873	76.715	76.575	76.884	1.7817	-0.15548	0.0028119	NaN	28.495	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	505640	+		36879	13485	18298	18376							0.08622907076460251
VGPKAGPL	8	Unmodified	_VGPKAGPL_					0	0	0			REV__ENSG00000188368|ENST00000341747|PRR19	REV__ENSG00000188368|ENST00000341747|PRR19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	738.4502441287041	1	738.450851	737.443575	1.9699	0.0014547	-2.8535	-0.0021072	-0.88355	-0.00065246	738.4485472956102	76.64	0.31615	76.64	76.466	76.782	0					12	9	2	0	0	0	0.89176	1	31913	31913		0.79363	0	1	950710	+		36880	11568	18299	18377	42946	42946					0.06435049531171444
VGPKAGPL	8	Unmodified	_VGPKAGPL_					0	0	0			REV__ENSG00000188368|ENST00000341747|PRR19	REV__ENSG00000188368|ENST00000341747|PRR19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	738.450851	737.443575	1.9699	0.0014547	-2.8535	-0.0021072	-0.88355	-0.00065246	738.4485472956102	76.64	0.31615	76.64	76.466	76.782	0	-0.067547	0.00033278	NaN	0.79363	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	950710	+		36881	11568	18299	18377							0.06435049531171444
VGPKAGPL	8	Unmodified	_VGPKAGPL_					0	0	0			REV__ENSG00000188368|ENST00000341747|PRR19	REV__ENSG00000188368|ENST00000341747|PRR19	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	738.450851	737.443575	2.1839	0.0016127	-3.7531	-0.0027715	-1.5692	-0.0011588	738.4479514818659	76.453	0.37728	76.775	76.572	76.949	0.32163	0.067547	-0.00033157	NaN	0.79363	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	881220	+		36882	11568	18299	18377							0.06435049531171444
VGPKAGPV	8	Unmodified	_VGPKAGPV_					0	0	0			REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.4356567263603	1	724.435201	723.427924	2.454	0.0017778	-2.1235	-0.0015384	0.33047	0.00023941	724.4334493073743	70.575	0.41682	71.928	71.712	72.129	1.3536					23	12	2	0	0	0	0.88958	1	29593	29593		2.8892	0	1	2622400	+		36883	14107	18300	18378	42947	42947					0.055147630141391346
VGPKAGPV	8	Unmodified	_VGPKAGPV_					0	0	0			REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	723.8821899294853	1	724.435201	723.427924	2.0757	0.0015037	-2.0297	-0.0014704	0.045957	3.3293E-05	724.4337333695612	72.41	0.45779	73.74	73.455	73.913	1.3298					22	14	2	0	0	0	2.3239	1	30324	30324		2.8892	0	1	1006100	+		36884	14107	18300	18378	42948	42948					0.055147630141391346
VGPKAGPV	8	Unmodified	_VGPKAGPV_					0	0	0			REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	REV__ENST00000598490.1_1_19:42814241-42814889:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	724.435201	723.427924	1.8406	0.0013334	-4.3944	-0.0031835	-2.5538	-0.0018501	724.432031362996	71.835	0.4112	71.835	71.636	72.047	0	-0.08843	-0.00083857	NaN	2.8892	25	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3469000	+		36885	14107	18300	18378							0.055147630141391346
VGPKELLPL	9	Unmodified	_VGPKELLPL_					0	0	0		ENST00000600988.1_1_19:36249340-36249487:+|nuORF	ENST00000600988.1_1_19:36249340-36249487:+|nuORF	ENST00000600988.1_1_19:36249340-36249487:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	483.3081542849541	2	483.305136	964.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.46	1	40.772	40.272	41.272	0.31263								0	0	0	0.42693	1	17009	17009		0.6015	0	1				36886	7541	18301	18379	42949	42949					0.11200405488091292
VGPKELLPL	9	Unmodified	_VGPKELLPL_					0	0	0		ENST00000600988.1_1_19:36249340-36249487:+|nuORF	ENST00000600988.1_1_19:36249340-36249487:+|nuORF	ENST00000600988.1_1_19:36249340-36249487:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	483.3083679080009	2	483.305136	964.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.151	1	40.447	39.947	40.947	1.2961								0	0	0	0.42693	1	16426	16426		0.6015	0	1				36887	7541	18301	18379	42950	42950					0.11200405488091292
VGPKGVGP	8	Unmodified	_VGPKGVGP_					0	0	0			REV__ENSG00000144810|ENST00000652472|COL8A1	REV__ENSG00000144810|ENST00000652472|COL8A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	710.4197875857353	1	710.419551	709.412274	2.303	0.0016361	-3.0462	-0.0021641	-0.74321	-0.00052799	710.4171969375559	60.54	0.56599	60.54	60.199	60.765	0					29	17	2	0	0	0	0.89176	1	25258	25258		0.79363	0	1	1459200	+		36888	10261	18302	18380	42951	42951					0.04594476497084088
VGPKGVGP	8	Unmodified	_VGPKGVGP_					0	0	0			REV__ENSG00000144810|ENST00000652472|COL8A1	REV__ENSG00000144810|ENST00000652472|COL8A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.4191772341728	1	710.419551	709.412274	1.6918	0.0012019	-1.7055	-0.0012116	-0.013704	-9.7355E-06	710.4178956949002	58.908	0.64467	60.877	60.487	61.131	1.969					34	20	2	0	0	0	0.89176	1	24746	24746		0.79363	0	1	1796100	+		36889	10261	18302	18380	42952	42952					0.04594476497084088
VGPKGVGP	8	Unmodified	_VGPKGVGP_					0	0	0			REV__ENSG00000144810|ENST00000652472|COL8A1	REV__ENSG00000144810|ENST00000652472|COL8A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	710.4189941287041	1	710.419551	709.412274	2.4686	0.0017537	-2.2771	-0.0016177	0.19148	0.00013603	710.417763393994	60.058	0.40676	62.024	61.854	62.261	1.9655					23	12	3	0	0	0	0.89176	1	25238	25238		0.79363	0	1	4733400	+		36890	10261	18302	18380	42953	42953					0.04594476497084088
VGPLDEIKE	9	Unmodified	_VGPLDEIKE_					0	0	0		ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2723876833916	2	500.27149	998.528426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.135	1	30.135	29.635	30.635	0								0	0	0	0.42693	1	12618	12618		2.0598	0.40713	1				36891	6	18303	18381	42954	42954					0.029103304864634083
VGPLDEIKE	9	Unmodified	_VGPLDEIKE_					0	0	0		ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	ABCB5|p.V1120G|1|0.06|ENSG00000004846|chr7:20745368-20745368|T/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.2714111208916	2	500.27149	998.528426	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.784	1	30.583	30.083	31.083	1.7987								0	0	0	0.42693	1	12055	12055		2.0598	0.21551	1				36892	6	18303	18381	42955	42955					0.029103304864634083
VGPLLRHY	8	Unmodified	_VGPLLRHY_					0	0	0		nc|ENSG00000104447|Q9UHF7|TRPS1;nc|ENSG00000104447|Q9UHF7-3|TRPS1;ENSG00000104447|ENST00000395715|TRPS1	nc|ENSG00000104447|Q9UHF7|TRPS1	nc|ENSG00000104447|Q9UHF7|TRPS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	318.1549560427666	3	318.855505	953.544686	0.14864	4.7394E-05	-0.22606	-7.208E-05	-0.07742	-2.4686E-05	318.855443412128	24.384	0.1249	25.625	25.516	25.641	1.241					5	3	2	0	0	0	2.3239	1	10154	10154		0.45834	0.18932	1	141290			36893	1465	18304	18382	42956	42956					0.066055012338893
VGPLPKSLED	10	Unmodified	_VGPLPKSLED_					0	0	0		ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	ENSG00000139329|ENST00000266718|LUM	MSMS	GG20161007_CRH_Patient100_A02_01	1	352.3398620486259	3	352.197485	1053.57063	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.593	1	27.593	27.093	28.093	0								0	0	0	0.66222	1	11541	11541		0.69767	0.23933	1				36894	2874	18305	18383	42957	42957					0.04598305894865007
VGPPGAPL	8	Unmodified	_VGPPGAPL_					0	0	0			REV__ENSG00000104897|ENST00000221494|SF3A2	REV__ENSG00000104897|ENST00000221494|SF3A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.4080078005791	1	707.408652	706.401375	1.6109	0.0011396	-2.6684	-0.0018876	-1.0575	-0.00074805	707.4066455057892	71.56	0.38287	71.884	71.654	72.037	0.32359					18	11	2	0	0	0	0.88958	1	29936	29936		2.8892	0	1	503700	+		36895	9156	18306	18384	42958	42958					0.03643074122805956
VGPPGAPL	8	Unmodified	_VGPPGAPL_					0	0	0			REV__ENSG00000104897|ENST00000221494|SF3A2	REV__ENSG00000104897|ENST00000221494|SF3A2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	707.408652	706.401375	1.6109	0.0011396	-2.6684	-0.0018876	-1.0575	-0.00074805	707.4066455057892	71.56	0.38287	71.884	71.654	72.037	0.32359	0.01562	0.00027448	NaN	2.8892	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	503700	+		36896	9156	18306	18384							0.03643074122805956
VGPPGKPG	8	Unmodified	_VGPPGKPG_					0	0	0			REV__ENSG00000171812|ENST00000397799|COL8A2	REV__ENSG00000171812|ENST00000397799|COL8A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	355.0695373415947	2	354.705589	707.396624	-1.1235	-0.00039852	0.92338	0.00032753	-0.20015	-7.0993E-05	354.7057172871921	14.869	0.15561	15.638	15.55	15.705	0.76937					7	4	2	0	0	0	2.3239	1	6193	6193		0	0	1	203430	+		36897	11045	18307	18385	42959	42959					0.031221899800470965
VGPRRGQIL	9	Unmodified	_VGPRRGQIL_					0	0	0		ENST00000586039.1_1_19:14581024-14581617:+|nuORF	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	ENST00000586039.1_1_19:14581024-14581617:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	497.7662536501884	2	498.309075	994.603597	2.9362	0.0014631	-0.96221	-0.00047948	1.974	0.00098365	498.3085560712918	80.977	0.15245	82.21	82.102	82.255	1.2332					6	4	2	0	0	0	0.11787	1	34000	34000		5.2307	0	1	804850			36898	7453	18308	18386	42960	42960					0.1060797752822964
VGPRRRRP	8	Unmodified	_VGPRRRRP_					0	0	0		ENST00000481848.6_2_6:127837311-127837734:-|nuORF	ENST00000481848.6_2_6:127837311-127837734:-|nuORF	ENST00000481848.6_2_6:127837311-127837734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.3122741580009	2	497.312484	992.610414	1.5945	0.00079295	-1.0956	-0.00054486	0.49886	0.00024809	497.31194619922746	76.024	0.79001	76.024	75.406	76.196	0					55	24	3	0	0	0	0.89176	1	31679	31679		0.79363	0	1	3855800			36899	6828	18309	18387	42961	42961					0.1138133519945086
VGPRTLLL	8	Unmodified	_VGPRTLLL_					0	0	0		ENST00000442496.1_1_22:37880295-37880663:-|nuORF	ENST00000442496.1_1_22:37880295-37880663:-|nuORF	ENST00000442496.1_1_22:37880295-37880663:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5672485232353	1	868.561464	867.554188	2.7951	0.0024277	0.72413	0.00062895	3.5192	0.0030567	868.5622581051789	109.34	0.2869	109.39	109.27	109.55	0.048843					27	11	3	0	0	0	0.89176	1	47197	47197		0.79363	0	1	26064000			36900	6565	18310	18388	42962	42962					0.11511269519428424
VGPRVSRR	8	Unmodified	_VGPRVSRR_					0	0	0			REV__ENSG00000164236|ENST00000296657|ANKRD33B	REV__ENSG00000164236|ENST00000296657|ANKRD33B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	309.52627	925.556982	-3.0804	-0.00095347	-2.7502	-0.00085126	-5.8306	-0.0018047	309.52530902490275	22.391	0.51844	22.391	22.06	22.578	0					45	16	4	0	0	0	2.3239	1	9384	9384		0.45834	0	1	8261200	+		36901	10727	18311	18389	42963	42963					0.0912253769694189
VGPRVSRRRL	10	Unmodified	_VGPRVSRRRL_					0	0	0			REV__ENSG00000164236|ENST00000296657|ANKRD33B	REV__ENSG00000164236|ENST00000296657|ANKRD33B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	400.0452453494072	3	399.254662	1194.74216	0.4247	0.00016956	3.8158	0.0015235	4.2405	0.001693	399.2549540157686	23.821	0.3586	25.505	25.333	25.692	1.6845					32	11	4	0	0	0	0.12561	1	9886	9886		0	0	1	1728900	+		36902	10727	18312	18390	42964	42964					0.15257520496538746
VGPRWLHRM	9	Unmodified	_VGPRWLHRM_					0	0	0			REV__ENSG00000103184|ENST00000251170|SEC14L5	REV__ENSG00000103184|ENST00000251170|SEC14L5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1534301638603	3	384.546677	1150.6182	-0.034766	-1.3369E-05	1.5415	0.00059276	1.5067	0.0005794	384.54711052434345	19.05	0.15805	20.109	19.974	20.132	1.0585					6	4	2	0	0	0	0.11946	1	7916	7916		0.26902	0.26902	1	236050	+		36903	9096	18313	18391	42965	42965					0.04891726404707697
VGPRWLHRM	9	Unmodified	_VGPRWLHRM_					0	0	0			REV__ENSG00000103184|ENST00000251170|SEC14L5	REV__ENSG00000103184|ENST00000251170|SEC14L5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1533080935478	3	384.546677	1150.6182	0.11535	4.4359E-05	-0.051369	-1.9754E-05	0.063985	2.4605E-05	384.5464655618574	18.468	0.20733	19.916	19.787	19.994	1.448					10	6	2	0	0	0	0.11946	1	7674	7674		0.26902	0	1	314310	+		36904	9096	18313	18391	42966	42966					0.04891726404707697
VGPSKAKNHPT	11	Unmodified	_VGPSKAKNHPT_					0	0	0			REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	REV__ENST00000536336.5_1_11:18633859-18655855:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	568.3121826052666	2	568.314554	1134.61456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.796	1	47.766	47.266	48.266	1.9703								0	0	0	0.63775	1	19184	19184		1.1933	0.39971	1		+		36905	11270	18314	18392	42967	42967					0.05263335111840206
VGPSMEFPWW	10	Unmodified	_VGPSMEFPWW_					0	0	0			REV__nc|ENSG00000107897|Q5T8D3-4|ACBD5	REV__nc|ENSG00000107897|Q5T8D3-4|ACBD5	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.5231506228447	3	412.523315	1234.54812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.203	1	32.203	31.703	32.703	0								0	0	0	0.66218	1	13491	13491		0.77653	0.36827	1		+		36906	9242	18315	18393	42968	42968					-0.05977616774407579
VGPSPDSP	8	Unmodified	_VGPSPDSP_					0	0	0			REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	REV__nc|ENSG00000120318|Q8WWN8-2|ARAP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	378.1797973513603	2	378.182143	754.349734	-1.4138	-0.00053469	-2.7759	-0.0010498	-4.1897	-0.0015845	378.18113231691297	18.223	0.37347	18.223	17.996	18.369	0					23	14	2	0	0	0	0.88958	1	7544	7544		2.8892	0	1	590710	+		36907	8132	18316	18394	42969	42969					-0.03726714361766881
VGPVAPAP	8	Unmodified	_VGPVAPAP_					0	0	0		ENST00000409442.2_1_2:70142301-70142484:+|nuORF	ENST00000409442.2_1_2:70142301-70142484:+|nuORF	ENST00000409442.2_1_2:70142301-70142484:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.4061767458916	1	707.408652	706.401375	1.8645	0.001319	-3.9351	-0.0027837	-2.0706	-0.0014648	707.4052856243916	71.852	0.34814	71.852	71.668	72.016	0					16	10	2	0	0	0	0.89176	1	29896	29896		0.79363	0	1	715330			36908	6380	18317	18395	42970	42970					0.03643074122794587
VGPVFLLLF	9	Unmodified	_VGPVFLLLF_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8145629763603	2	502.812596	1003.61064	2.0321	0.0010218	1.5991	0.00080405	3.6312	0.0018258	502.8134541028111	81.541	1.0218	81.541	81.133	82.154	0					97	33	5	0	0	0	0.84963	3	33909	33909;33961;34062		0.6015	0	1	265370000	+		36909	14815	18318	18396	42971;42972;42973	42971					0.10897897356096564
VGPVFLLLF	9	Unmodified	_VGPVFLLLF_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1004.618457019329	1	1004.61792	1003.61064	2.0216	0.002031	0.96763	0.0009721	2.9893	0.0030031	1004.6200110462075	81.522	0.32175	81.522	81.38	81.701	0					17	10	2	0	0	0	0.84963	1	33958	33958		0.6015	0	1	1135900	+		36910	14815	18318	18396	42974	42974					0.10897897356096564
VGPVFLLLF	9	Unmodified	_VGPVFLLLF_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.8150207400322	2	502.812596	1003.61064	2.536	0.0012751	1.6129	0.00081101	4.1489	0.0020861	502.8135007896727	81.37	1.1933	81.661	81.183	82.376	0.29056					105	38	5	0	0	0	0.84963	1	34006	34006		0.6015	0	1	287870000	+		36911	14815	18318	18396	42975	42975					0.10897897356096564
VGPVFLLLF	9	Unmodified	_VGPVFLLLF_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8156005740166	2	502.812596	1003.61064	2.7388	0.0013771	2.4887	0.0012513	5.2275	0.0026285	502.8138803583458	80.494	1.0726	81.745	81.048	82.12	1.2512					94	34	5	0	0	0	0.84963	1	33839	33839		0.6015	0	1	165570000	+		36912	14815	18318	18396	42976	42976					0.10897897356096564
VGPVFLLLF	9	Unmodified	_VGPVFLLLF_					0	0	0			REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	REV__tr|A0A553SHT5|A0A553SHT5_NIACIDUF975familyproteinOS=NialliacirculansOX=1397GN=CEQ21_13595PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1004.61792	1003.61064	2.0216	0.002031	0.96763	0.0009721	2.9893	0.0030031	1004.6200110462075	81.522	0.32175	81.522	81.38	81.701	0	-0.076372	-0.00037873	NaN	0.6015	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1135900	+		36913	14815	18318	18396							0.10897897356096564
VGPVNVGK	8	Unmodified	_VGPVNVGK_					0	0	0			REV__tr|A0A7D7A4P2|A0A7D7A4P2_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	REV__tr|A0A7D7A4P2|A0A7D7A4P2_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=pykPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1536437869072	2	385.231971	768.449388	-0.01051	-4.0487E-06	0.42689	0.00016445	0.41638	0.0001604	385.23237805573194	53.059	0.35468	53.059	52.821	53.176	0					16	11	2	0	0	0	2.3239	1	22049	22049		0	0	1	1128500	+		36914	14925	18319	18397	42977	42977					0.055901480428588
VGPVRAAR	8	Unmodified	_VGPVRAAR_					0	0	0			REV__ENSG00000163082|ENST00000321276|SGPP2	REV__ENSG00000163082|ENST00000321276|SGPP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2570068240166	2	413.256311	824.49807	2.2414	0.00092626	-0.86541	-0.00035764	1.3759	0.00056862	413.2557835853606	81.253	0.42446	81.543	81.276	81.701	0.29055					27	13	3	0	0	0	0.89176	1	33963	33963		0.79363	0	1	3976300	+		36915	10671	18320	18398	42978	42978					0.07880061402602223
VGPVSALL	8	Unmodified	_VGPVSALL_					0	0	0			REV__ENST00000292599.3_1_5:179201954-179202125:+|nuORF	REV__ENST00000292599.3_1_5:179201954-179202125:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	377.5935851931572	2	378.236722	754.45889	1.8904	0.00071503	3.5371	0.0013379	5.4276	0.0020529	378.23849218301206	65.457	0.15335	66.856	66.788	66.941	1.3989					7	4	2	0	0	0	2.3239	1	27451	27451		2.8892	0	1	352440	+		36916	12284	18321	18399	42979	42979					0.07183916328381201
VGPVSALL	8	Unmodified	_VGPVSALL_					0	0	0			REV__ENST00000292599.3_1_5:179201954-179202125:+|nuORF	REV__ENST00000292599.3_1_5:179201954-179202125:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	378.236722	754.45889	1.7406	0.00065836	7.1551	0.0027063	8.8957	0.0033647	378.23972160602005	66.91	0.18659	67.234	67.096	67.282	0.32449	0.18911	0.0020891	NaN	6.3541	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	335630	+		36917	12284	18321	18399							0.07183916328381201
VGPVTSRS	8	Unmodified	_VGPVTSRS_					0	0	0		ENST00000479774.5_1_2:106775690-106776508:-|nuORF	ENST00000479774.5_1_2:106775690-106776508:-|nuORF	ENST00000479774.5_1_2:106775690-106776508:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1808959841728	2	401.72451	801.434466	2.7735	0.0011142	-2.6448	-0.0010625	0.12874	5.1719E-05	401.72398437456104	60.87	0.24317	62.835	62.699	62.942	1.9653					10	7	2	0	0	0	2.3239	1	25536	25536		0.6015	0	1	648970			36918	6813	18322	18400	42980	42980					0.025806561748481727
VGQAAEEK	8	Unmodified	_VGQAAEEK_					0	0	0			REV__tr|A0A7D6VRJ4|A0A7D6VRJ4_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12425PE=3SV=1	REV__tr|A0A7D6VRJ4|A0A7D6VRJ4_9CLOTABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12425PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2134582400322	2	416.213975	830.413397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.579	1	29.862	29.362	30.362	1.2825								0	0	0	1.0178	1	11982	11982		2.5775	0	1		+		36919	15412	18323	18401	42981	42981					-0.008593539246703585
VGQDQEEE	8	Unmodified	_VGQDQEEE_					0	0	0			REV__nc|ENSG00000117713|O14497-3|ARID1A	REV__nc|ENSG00000117713|O14497-3|ARID1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.1933166384697	2	467.193436	932.37232	2.0007	0.00093473	-0.88033	-0.00041129	1.1204	0.00052345	467.1927656699115	43.336	0.47947	44.689	44.499	44.978	1.3536					20	15	2	0	0	0	0.89176	1	18175	18175		0.79363	0	1	1872300	+		36920	9507	18324	18402	42982	42982					-0.09657159754806344
VGQGCWPG	8	Unmodified	_VGQGCWPG_					0	0	0		ENST00000402119.8_1_19:16045502-16045571:-|nuORF	ENST00000402119.8_1_19:16045502-16045571:-|nuORF	ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	402.1802245974541	2	402.178881	802.343209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.321	1	35.62	35.12	36.12	0.29942								0	0	0	1.0178	1	14840	14840		0.79363	0	1				36921	6348	18325	18403	42983	42983					-0.0658693079412842
VGQGDSVLIHE	11	Unmodified	_VGQGDSVLIHE_					0	0	0		tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	tr|A0A553SKM7|A0A553SKM7_NIACIDNAinternalization-relatedcompetenceproteinComEC/Rec2OS=NialliacirculansOX=1397GN=CEQ21_18895PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	577.2994872927666	2	577.296027	1152.5775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.06	1	101.24	100.74	101.74	0.18047								0	0	0	0.63775	1	42522	42522		1.3295	0.25807	1				36922	16297	18326	18404	42984	42984					0.007316187754440762
VGQGKAAA	8	Unmodified	_VGQGKAAA_					0	0	0			REV__ENST00000507635.5_1_5:137780026-137781437:+|nuORF	REV__ENST00000507635.5_1_5:137780026-137781437:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	701.3947021365166	1	701.394064	700.386788	2.2447	0.0015744	-2.186	-0.0015332	0.058714	4.1182E-05	701.39258158399	59.871	0.41277	60.199	60.029	60.442	0.32809					24	13	2	0	0	0	0.89176	1	25072	25072		0.79363	0	1	1714200	+		36923	9851	18327	18405	42985	42985					0.024610019746432954
VGQIEDKRK	9	Unmodified	_VGQIEDKRK_					0	0	0			REV__ENSG00000113318|ENST00000265081|MSH3	REV__ENSG00000113318|ENST00000265081|MSH3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1627075076103	2	536.809105	1071.60366	1.7041	0.00091479	-0.85165	-0.00045717	0.85248	0.00045762	536.8086350573456	77.931	0.158	77.931	77.811	77.969	0					6	4	2	0	0	0	0.11946	1	32412	32412		0.6015	0	1	181600	+		36924	9379	18328	18406	42986	42986					0.0707193273754001
VGQLKLLL	8	Unmodified	_VGQLKLLL_					0	0	0			REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	442.3034545779228	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.507	1	91.873	91.373	92.373	1.366								0	0	0	1.0178	1	38120	38120		0.79363	0	1		+		36925	15567	18329	18407	42987	42987					0.14424726696279322
VGQLKLLLKK	10	Unmodified	_VGQLKLLLKK_					0	0	0			REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	REV__tr|A0A7D6VZE2|A0A7D6VZE2_9CLOTdITP/XTPpyrophosphataseOS=ClostridiumintestinaleOX=36845GN=HZF06_19955PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3998290896416	2	570.397359	1138.78016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.22	1	101.41	100.91	101.91	0.19076								0	0	0	0.66237	1	42560	42560		0.45834	0.10771	1		+		36926	15567	18330	18408	42988	42988					0.21632593638651088
VGQLMKRRNK	10	Unmodified	_VGQLMKRRNK_					0	0	0			REV__ENST00000372045.5_1_X:109931832-109931904:-|nuORF	REV__ENST00000372045.5_1_X:109931832-109931904:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9000121951103	4	308.186937	1228.71864	-3.5376	-0.0010902	0.48273	0.00014877	-3.0548	-0.00094146	308.18714419556505	12.145	0.40503	12.145	11.972	12.377	0					35	12	4	0	0	0	0.12556	1	5087	5087		1.9064	0	1	2504400	+		36927	12677	18331	18409	42989	42989					0.11343338667711578
VGQMQYEK	8	Unmodified	_VGQMQYEK_					0	0	0		nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1602661013603	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.49	1	14.317	13.817	14.817	0.82789								0	0	0	1.0178	1	5594	5594		3.9444	0	1				36928	7852	18332	18410	42990	42990					-0.03250451733936188
VGQMQYEK	8	Unmodified	_VGQMQYEK_					0	0	0		nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1597473025322	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.586	1	14.414	13.914	14.914	0.82789								0	0	0	1.0178	1	5634	5634		7.2892	0	1				36929	7852	18332	18410	42991	42991					-0.03250451733936188
VGQMQYEK	8	Unmodified	_VGQMQYEK_					0	0	0		nc|ENSG00000110841|Q86W92-3|PPFIBP1;nc|ENSG00000110841|Q86W92|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	nc|ENSG00000110841|Q86W92-3|PPFIBP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1595947146416	3	328.160265	981.458967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.69	1	14.518	14.018	15.018	0.82789								0	0	0	1.0178	1	5676	5676		1.6526	0	1				36930	7852	18332	18410	42992	42992					-0.03250451733936188
VGQPGPAV	8	Unmodified	_VGQPGPAV_					0	0	0		CDIPT|p.T71Lfs*44|1|0.47|ENSG00000103502|chr16:29861217-29861227|CAGCGGTCCGT/-|frameshift_variant	CDIPT|p.T71Lfs*44|1|0.47|ENSG00000103502|chr16:29861217-29861227|CAGCGGTCCGT/-|frameshift_variant	CDIPT|p.T71Lfs*44|1|0.47|ENSG00000103502|chr16:29861217-29861227|CAGCGGTCCGT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	724.3954345583916	1	724.398815	723.391539	2.3019	0.0016675	-3.5045	-0.0025386	-1.2025	-0.00087112	724.3963607123143	62.059	0.47706	63.477	63.238	63.715	1.4177					33	14	3	0	0	0	0.89176	1	25971	25971		0.79363	0	1	5991000			36931	141	18333	18411	42993	42993					0.01877886117415528
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	768.4238159060478	1	768.42503	767.417754	1.8808	0.0014452	-3.0703	-0.0023593	-1.1895	-0.00091407	768.422620977271	66.63	0.4407	66.954	66.718	67.158	0.32449					28	13	3	0	0	0	0.89176	2	27849	27849;27952		0.79363	0	1	3392300	+		36932	11778	18334	18412	42994;42995	42994					0.024741552888940532
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	768.4238769412041	1	768.42503	767.417754	1.8344	0.0014096	-2.9703	-0.0022825	-1.1359	-0.00087287	768.4225499200546	65.73	0.46037	67.129	66.849	67.31	1.3989					28	14	3	0	0	0	0.89176	2	27532	27532;27577		0.79363	0	1	3586000	+		36933	11778	18334	18412	42996;42997	42996					0.024741552888940532
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	768.4238769412041	1	768.42503	767.417754	1.3274	0.00102	-3.2784	-0.0025192	-1.951	-0.0014992	768.4219939324147	65.475	0.40237	67.383	67.126	67.529	1.9085					22	12	2	0	0	0	0.89176	2	27423	27423;27472		0.79363	0	1	3313100	+		36934	11778	18334	18412	42998;42999	42998					0.024741552888940532
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	768.42503	767.417754	1.816	0.0013955	-3.4439	-0.0026464	-1.6278	-0.0012509	768.42214900007	66.686	0.41355	66.686	66.448	66.861	0	-0.23676	-0.000194	NaN	0.79363	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3001200	+		36935	11778	18334	18412							0.024741552888940532
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	768.42503	767.417754	1.8808	0.0014452	-3.0703	-0.0023593	-1.1895	-0.00091407	768.422620977271	66.63	0.4407	66.954	66.718	67.158	0.32449	0.03128	9.3076E-05	NaN	0.79363	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3392300	+		36936	11778	18334	18412							0.024741552888940532
VGQPPAVT	8	Unmodified	_VGQPPAVT_					0	0	0			REV__ENSG00000204366|ENST00000375527|ZBTB12	REV__ENSG00000204366|ENST00000375527|ZBTB12	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	768.42503	767.417754	1.8344	0.0014096	-2.9703	-0.0022825	-1.1359	-0.00087287	768.4225499200546	65.73	0.46037	67.129	66.849	67.31	1.3989	0.20548	0.00016991	NaN	0.79363	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3586000	+		36937	11778	18334	18412							0.024741552888940532
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.1795532107353	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.297	1	35.297	34.797	35.797	0								0	0	0	1.0178	1	14793	14793		0.79363	0	1		+		36938	10523	18335	18413	43000	43000					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1801940798759	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.596	1	22.773	22.273	23.273	1.177								0	0	0	1.0178	1	9019	9019		0.79363	0	1		+		36939	10523	18335	18413	43001	43001					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1803161501884	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.719	1	22.896	22.396	23.396	1.177								0	0	0	1.0178	1	9072	9072		0.79363	0	1		+		36940	10523	18335	18413	43002	43002					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1795837283134	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.863	1	28.134	27.634	28.634	1.2715								0	0	0	1.0178	1	11251	11251		0.79363	0	1		+		36941	10523	18335	18413	43003	43003					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1804077029228	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.352	1	30.635	30.135	31.135	1.2825								0	0	0	1.0178	1	12314	12314		0.79363	0	1		+		36942	10523	18335	18413	43004	43004					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1803161501884	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.687	1	30.97	30.47	31.47	1.2825								0	0	0	1.0178	1	12456	12456		0.79363	0	1		+		36943	10523	18335	18413	43005	43005					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1806518435478	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.897	1	31.179	30.679	31.679	1.2825								0	0	0	1.0178	1	12546	12546		0.79363	0	1		+		36944	10523	18335	18413	43006	43006					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1805297732353	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.446	1	33.724	33.224	34.224	1.2782								0	0	0	1.0178	1	13609	13609		0.79363	0	1		+		36945	10523	18335	18413	43007	43007					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1798583865166	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.534	1	33.813	33.313	34.313	1.2782								0	0	0	1.0178	1	13646	13646		0.79363	0	1		+		36946	10523	18335	18413	43008	43008					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1799499392509	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.631	1	33.909	33.409	34.409	1.2782								0	0	0	1.0178	1	13686	13686		0.79363	0	1		+		36947	10523	18335	18413	43009	43009					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1804687380791	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.205	1	47.58	47.08	48.08	1.3751								0	0	0	1.0178	1	19353	19353		0.79363	0	1		+		36948	10523	18335	18413	43010	43010					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_01	3	402.1808654665947	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.136	1	74.466	73.966	74.966	1.3297								0	0	0	1.0178	1	30695	30695		0.79363	0	1		+		36949	10523	18335	18413	43011	43011					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1805297732353	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.561	1	36.384	35.884	36.884	1.8227								0	0	0	1.0178	1	14492	14492		0.79363	0	1		+		36950	10523	18335	18413	43012	43012					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1802551150322	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.933	1	47.903	47.403	48.403	1.9703								0	0	0	1.0178	1	19242	19242		0.79363	0	1		+		36951	10523	18335	18413	43013	43013					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1803466677666	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.173	1	48.143	47.643	48.643	1.9703								0	0	0	1.0178	1	19344	19344		0.79363	0	1		+		36952	10523	18335	18413	43014	43014					-0.06336803855481321
VGQQDADA	8	Unmodified	_VGQQDADA_					0	0	0			REV__ENSG00000156875|ENST00000370152|MFSD14A	REV__ENSG00000156875|ENST00000370152|MFSD14A	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1794006228447	2	402.180132	802.345711	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.285	1	59.254	58.754	59.754	1.9684								0	0	0	1.0178	1	24030	24030		0.79363	0	1		+		36953	10523	18335	18413	43015	43015					-0.06336803855481321
VGQRILDPLL	10	Unmodified	_VGQRILDPLL_					0	0	0		nc|ENSG00000174527|Q8N1T3|MYO1H	nc|ENSG00000174527|Q8N1T3|MYO1H	nc|ENSG00000174527|Q8N1T3|MYO1H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3463012576103	2	562.345323	1122.67609	3.5261	0.0019829	-1.9929	-0.0011207	1.5332	0.00086216	562.3441584796763	73.097	0.56511	74.427	74.004	74.569	1.3297					30	17	2	0	0	0	0.87343	1	30635	30635		4.3292	0	1	1673700			36954	7930	18336	18414	43016	43016					0.11966266811123205
VGQRLLRQR	9	Unmodified	_VGQRLLRQR_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3520995974541	2	563.351806	1124.68906	1.8611	0.0010484	-0.46538	-0.00026217	1.3957	0.00078627	563.3514764376096	83.287	1.0447	83.287	82.892	83.937	0					66	33	3	0	0	0	0.84963	1	34667	34667		0.6015	0	1	1643900			36955	2808	18337	18415	43017	43017					0.13170142713875066
VGQRLLRQR	9	Unmodified	_VGQRLLRQR_					0	0	0		ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	ENSG00000138061|ENST00000610745|CYP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3529540896416	2	563.351806	1124.68906	2.2434	0.0012638	-0.10544	-5.9401E-05	2.138	0.0012044	563.3517014406947	83.206	0.98624	83.476	83.029	84.016	0.27029					60	31	3	0	0	0	0.84963	2	34703	34703;34923		0.6015	0	1	1708100			36956	2808	18337	18415	43018;43019	43018					0.13170142713875066
VGQYLKKFRL	10	Unmodified	_VGQYLKKFRL_					0	0	0		ENSG00000184924|ENST00000328379|PTRHD1	ENSG00000184924|ENST00000328379|PTRHD1	ENSG00000184924|ENST00000328379|PTRHD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3784667849541	2	626.38224	1250.74993	2.728	0.0017088	-3.2613	-0.0020428	-0.53332	-0.00033406	626.3800645524086	93.286	0.47488	94.564	94.292	94.767	1.277					39	14	4	0	0	0	0.89803	1	39183	39183		0.45834	0	1	6226700			36957	4717	18338	18416	43020	43020					0.1345823497345009
VGRAAAAL	8	Unmodified	_VGRAAAAL_					0	0	0		ENST00000526246.5_1_11:66099749-66102792:-|nuORF;nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	728.4428588747978	1	728.441349	727.434072	2.5539	0.0018604	-0.49362	-0.00035957	2.0603	0.0015008	728.4408883581378	107.81	0.12717	107.97	107.88	108.01	0.15781					10	6	2	0	0	0	0.89198	1	46470	46470		0	0	1	39554000			36958	4342	18339	18417	43021	43021					0.059452812456356696
VGRAAAAL	8	Unmodified	_VGRAAAAL_					0	0	0		ENST00000526246.5_1_11:66099749-66102792:-|nuORF;nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	728.441349	727.434072	1.3864	0.0010099	0.72053	0.00052486	2.107	0.0015348	728.4416999285994	107.87	0.12386	107.87	107.79	107.91	0	-0.043633	0.00041525	NaN	0	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27076000			36959	4342	18339	18417							0.059452812456356696
VGRAAAAL	8	Unmodified	_VGRAAAAL_					0	0	0		ENST00000526246.5_1_11:66099749-66102792:-|nuORF;nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	728.441349	727.434072	2.7126	0.001976	-1.364	-0.0009936	1.3486	0.00098236	728.4402678397236	107.83	0.14349	107.89	107.8	107.95	0.052452	-0.027385	-0.0011032	NaN	0	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	29238000			36960	4342	18339	18417							0.059452812456356696
VGRAAAAL	8	Unmodified	_VGRAAAAL_					0	0	0		ENST00000526246.5_1_11:66099749-66102792:-|nuORF;nc|ENSG00000174791|Q13671-2|RIN1;ENSG00000174791|ENST00000311320|RIN1	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	ENST00000526246.5_1_11:66099749-66102792:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	728.441349	727.434072	2.6397	0.0019229	0.49541	0.00036088	3.1352	0.0022838	728.441618146477	107.77	0.1298	107.93	107.86	107.99	0.15795	0.016917	0.00025127	NaN	0	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42023000			36961	4342	18339	18417							0.059452812456356696
VGRAGPAA	8	Unmodified	_VGRAGPAA_					0	0	0		ENST00000308497.8_1_4:184827565-184827868:+|nuORF	ENST00000308497.8_1_4:184827565-184827868:+|nuORF	ENST00000308497.8_1_4:184827565-184827868:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	698.3950073122978	1	698.394399	697.387122	1.43	0.00099871	-1.7893	-0.0012497	-0.35931	-0.00025094	698.3931090232808	103.4	0.064651	103.4	103.34	103.41	0					4	2	2	0	0	0	0.89198	1	43391	43391		0	0	1	41693000			36962	5787	18340	18418	43022	43022					0.026324216944999534
VGRAGPRP	8	Unmodified	_VGRAGPRP_					0	0	0		ENSG00000112164|ENST00000373256|GLP1R	ENSG00000112164|ENST00000373256|GLP1R	ENSG00000112164|ENST00000373256|GLP1R	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	809.4747192263603	1	809.474046	808.46677	1.2688	0.0010271	-4.2774	-0.0034624	-3.0086	-0.0024353	809.4698665983723	101.19	0.29047	101.19	101	101.29	0					23	9	3	0	0	0	0.89176	1	42363	42363		0.79363	0	1	10624000			36963	1769	18341	18419	43023	43023					0.05487488368498816
VGRAGRPRSS	10	Unmodified	_VGRAGRPRSS_					0	0	0		ENST00000341853.5_1_15:100333036-100340296:-|nuORF;ENST00000561042.5_1_15:100333036-100340296:-|nuORF	ENST00000341853.5_1_15:100333036-100340296:-|nuORF	ENST00000341853.5_1_15:100333036-100340296:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2011291384697	3	348.200334	1041.57917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.895	1	27.612	27.112	28.112	1.7167								0	0	0	0.66052	1	10828	10828		1.7423	0.26037	1				36964	5937	18342	18420	43024	43024					0.06004717374685242
VGRALRPS	8	Unmodified	_VGRALRPS_					0	0	0		ENST00000380527.2_1_9:19049532-19049658:+|nuORF	ENST00000380527.2_1_9:19049532-19049658:+|nuORF	ENST00000380527.2_1_9:19049532-19049658:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	855.5167724490166	1	855.515911	854.508634	2.2545	0.0019288	-0.20254	-0.00017328	2.052	0.0017555	855.5147562980486	73.245	0.41336	73.57	73.371	73.784	0.32494					19	13	2	0	0	0	0.89008	1	30638	30638		2.5775	1.7838	1	3981000			36965	6225	18343	18421	43025	43025					0.0755604405703707
VGRARSARPR	10	Unmodified	_VGRARSARPR_					0	0	0		ENST00000412554.6_2_16:1918183-1922120:-|nuORF	ENST00000412554.6_2_16:1918183-1922120:-|nuORF	ENST00000412554.6_2_16:1918183-1922120:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3402587771416	2	563.33923	1124.66391	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.209	1	46.538	46.038	47.038	0.32899								0	0	0	0.66166	1	19392	19392		1.6526	0	1				36966	6388	18344	18422	43026	43026					0.10656087911320355
VGRELLIF	8	Unmodified	_VGRELLIF_					0	0	0		nc|ENSG00000109472|P16870-2|CPE;ENSG00000109472|ENST00000402744|CPE	nc|ENSG00000109472|P16870-2|CPE	nc|ENSG00000109472|P16870-2|CPE	MSMS	GG20161007_CRH_Patient100_W632_01	3	316.1959716677666	3	316.195527	945.564752	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.259	1	13.985	13.485	14.485	0.72639								0	0	0	1.0178	1	5505	5505		0.45834	0	1				36967	1665	18345	18423	43027	43027					0.08979252173855912
VGRERLGRGR	10	Unmodified	_VGRERLGRGR_					0	0	0			REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	REV__ENST00000474359.6_1_12:58013521-58016599:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	385.1537353396416	3	385.898767	1154.67447	0.50783	0.00019597	0.40839	0.0001576	0.91622	0.00035357	386.23458090008006	28.042	0.24762	29.817	29.634	29.881	1.7754					14	7	2	0	0	0	0.12559	1	11694	11694		0.77653	0.61721	1	773490	+		36968	13307	18346	18424	43028	43028					0.10332070565755203
VGRFQYLVK	9	Unmodified	_VGRFQYLVK_					0	0	0			REV__ENST00000465508.5_1_1:6695737-6697639:-|nuORF	REV__ENST00000465508.5_1_1:6695737-6697639:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1017333865166	3	370.553715	1108.63931	1.0834	0.00040147	1.1032	0.00040878	2.1866	0.00081024	370.55520412958674	45.616	0.31683	46.991	46.768	47.085	1.3751					14	9	2	0	0	0	0.11941	1	19117	19117		0	0	1	1325900	+		36969	8518	18347	18425	43029	43029					0.08934014985220529
VGRFRELLR	9	Unmodified	_VGRFRELLR_					0	0	0		ENSG00000165914|ENST00000328459|TTC7B;nc|ENSG00000165914|Q86TV6-2|TTC7B	ENSG00000165914|ENST00000328459|TTC7B	ENSG00000165914|ENST00000328459|TTC7B	MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3504516482353	2	573.348732	1144.68291	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.201	1	66.526	66.026	67.026	0.32449								0	0	0	0.42693	1	27715	27715		2.0598	0.40713	1				36970	3867	18348	18426	43030	43030					0.11635624482369167
VGRGGAAH	8	Unmodified	_VGRGGAAH_					0	0	0		nc|ENSG00000174672|Q8IWQ3-5|BRSK2	nc|ENSG00000174672|Q8IWQ3-5|BRSK2	nc|ENSG00000174672|Q8IWQ3-5|BRSK2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	724.6228515505791	1	724.384897	723.37762	2.6713	0.001935	-4.4184	-0.0032007	-1.7472	-0.0012656	724.3832133338304	96.08	0.16025	96.185	96.125	96.286	0.105					5	4	2	0	0	0	2.3239	1	40229	40229		0.79363	0	1	385400			36971	7931	18349	18427	43031	43031					0.004866534089842389
VGRGGGPA	8	Unmodified	_VGRGGGPA_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	670.3625976443291	1	670.363099	669.355822	3.2895	0.0022052	-2.8573	-0.0019154	0.43225	0.00028976	670.361546223937	98.687	0.17706	98.914	98.783	98.96	0.22776					8	5	2	0	0	0	0.89176	1	41540	41540		0.79363	0	1	12560000			36972	3775	18350	18428	43032	43032					0.007918486604125974
VGRGGVCVP	9	Unmodified	_VGRGGVCVP_					0	0	0			REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2299377322197	2	422.228905	842.443257	0.94615	0.00039949	1.2617	0.00053271	2.2078	0.0009322	422.2296277814121	44.332	0.21569	44.332	44.194	44.409	0					9	6	2	0	0	0	0.77526	1	18519	18519		4.3292	1.7518	1	343210	+		36973	13677	18351	18429	43033	43033					0.015733065396716484
VGRGGVCVP	9	Unmodified	_VGRGGVCVP_					0	0	0			REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	422.228905	842.443257	0.94615	0.00039949	1.2617	0.00053271	2.2078	0.0009322	422.2296277814121	44.332	0.21569	44.332	44.194	44.409	0	0.14526	0.0011408	NaN	4.3292	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343210	+		36974	13677	18351	18429							0.015733065396716484
VGRGGVCVP	9	Unmodified	_VGRGGVCVP_					0	0	0			REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	REV__ENST00000528842.1_1_8:145537548-145537767:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	422.228905	842.443257	2.0687	0.00087346	-1.9655	-0.00082989	0.10319	4.3572E-05	422.2282873217926	43.717	0.50455	44.041	43.739	44.244	0.32389	-0.14526	-0.0015844	NaN	4.3292	19	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	278250	+		36975	13677	18351	18429							0.015733065396716484
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	393.7561828494072	2	393.206287	784.398021	0.9118	0.00035853	2.8008	0.0011013	3.7126	0.0014598	393.2073994666135	25.551	0.7381	25.803	25.335	26.073	0.25197					33	23	2	0	0	0	2.3239	1	10679	10679		0.79363	0	1	471860	+		36976	13330	18352	18430	43034	43034					-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.2071105837822	2	393.206287	784.398021	0.70643	0.00027777	2.0056	0.0007886	2.712	0.0010664	393.20665175312695	23.4	0.45927	24.614	24.349	24.808	1.2145					28	14	3	0	0	0	0.89176	1	9774	9774		0.79363	0	1	625720	+		36977	13330	18352	18430	43035	43035					-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	393.7554199099541	2	393.206287	784.398021	0.83559	0.00032856	1.8619	0.00073212	2.6975	0.0010607	393.206950524494	24.44	0.55083	25.681	25.331	25.882	1.241					35	17	3	0	0	0	2.3239	1	10206	10206		0.79363	0	1	489370	+		36978	13330	18352	18430	43036	43036					-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	393.7554504275322	2	393.206287	784.398021	0.39368	0.0001548	1.4351	0.00056429	1.8288	0.00071908	393.2066947690813	23.992	0.63348	25.677	25.333	25.967	1.6845					26	20	2	0	0	0	2.3239	1	10015	10015		0.79363	0	1	436520	+		36979	13330	18352	18430	43037	43037					-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	393.206287	784.398021	-0.69371	-0.00027277	2.9643	0.0011656	2.2706	0.00089283	393.207382725099	24.655	0.55198	24.655	24.398	24.95	0	-0.0052616	0.00037438	NaN	0.79363	24	17	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	532210	+		36980	13330	18352	18430							-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	393.206287	784.398021	-0.64262	-0.00025268	3.9021	0.0015343	3.2595	0.0012817	393.20783707149013	25.89	0.76529	25.89	25.441	26.206	0	0.12721	0.0010792	NaN	0.79363	32	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	466770	+		36981	13330	18352	18430							-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	393.206287	784.398021	0.70643	0.00027777	2.0056	0.0007886	2.712	0.0010664	393.20665175312695	23.4	0.45927	24.614	24.349	24.808	1.2145	-0.045797	-0.00037961	NaN	0.79363	28	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	625720	+		36982	13330	18352	18430							-0.002801759311864771
VGRGPWGG	8	Unmodified	_VGRGPWGG_					0	0	0			REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	REV__ENST00000478753.4_3_16:30456569-30456872:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	393.206287	784.398021	0.35316	0.00013886	2.3487	0.00092353	2.7019	0.0010624	393.20714429158033	23.02	0.49207	24.671	24.467	24.96	1.6511	0.011276	-0.00010975	NaN	0.79363	23	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	533650	+		36983	13330	18352	18430							-0.002801759311864771
VGRGRRWA	8	Unmodified	_VGRGRRWA_					0	0	0			REV__ENST00000374980.2_1_20:32700034-32700091:-|nuORF	REV__ENST00000374980.2_1_20:32700034-32700091:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2816955447197	2	479.278109	956.541666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.035	1	64.98	64.48	65.48	1.9444								0	0	0	1.0178	1	26451	26451		2.5775	0	1		+		36984	12709	18353	18431	43038	43038					0.06165670899736142
VGRGVRHAYL	10	Unmodified	_VGRGVRHAYL_					0	0	0			REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3259155154228	2	564.325257	1126.63596	0.80344	0.0004534	-1.3117	-0.0007402	-0.50821	-0.0002868	564.3260980562094	53.005	0.25694	54.406	54.216	54.473	1.4005					11	7	2	0	0	0	0.77604	1	22167	22167		14.838	3.198	1	1102700	+		36985	11616	18354	18432	43039	43039					0.07770764931206031
VGRGVRHAYL	10	Unmodified	_VGRGVRHAYL_					0	0	0			REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	564.325257	1126.63596	0.80344	0.0004534	-1.3117	-0.0007402	-0.50821	-0.0002868	564.3260980562094	53.005	0.25694	54.406	54.216	54.473	1.4005	0.0026766	0.0053387	NaN	14.838	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1102700	+		36986	11616	18354	18432							0.07770764931206031
VGRGVRHAYL	10	Unmodified	_VGRGVRHAYL_					0	0	0			REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	REV__VN1R2|p.P228Sfs*27|1|0.41|ENSG00000196131|chr19:53259051-53259052|-/T|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	564.325257	1126.63596	1.2404	0.00069998	-7.9249	-0.0044722	-6.6845	-0.0037722	564.3206076815711	52.428	0.25111	54.401	54.228	54.48	1.9722	-0.0026766	-0.0021254	NaN	14.838	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	937020	+		36987	11616	18354	18432							0.07770764931206031
VGRHLLERSR	10	Unmodified	_VGRHLLERSR_					0	0	0			REV__RNF26|p.I114L|1|0.09|ENSG00000173456|chr11:119335462-119335462|A/C|missense_variant	REV__RNF26|p.I114L|1|0.09|ENSG00000173456|chr11:119335462-119335462|A/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	611.3563110232353	2	611.859995	1221.70544	1.7885	0.0010943	-3.9341	-0.0024071	-2.1456	-0.0013128	611.8581501015466	77.665	0.60329	77.981	77.857	78.46	0.31654					23	18	2	0	0	0	0.12556	1	32492	32492		1.4819	0	1	627000	+		36988	14614	18355	18433	43040	43040					0.10345223879971854
VGRHTVLKFF	10	Unmodified	_VGRHTVLKFF_					0	0	0			REV__tr|A0A553SGC2|A0A553SGC2_NIACICa(2+)/H(+)antiporterOS=NialliacirculansOX=1397GN=caxPE=3SV=1	REV__tr|A0A553SGC2|A0A553SGC2_NIACICa(2+)/H(+)antiporterOS=NialliacirculansOX=1397GN=caxPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	602.3561279177666	2	602.353483	1202.69241	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.161	1	88.656	88.156	89.156	1.4953								0	0	0	0.66155	1	36746	36746		1.8442	0	1		+		36989	14740	18356	18434	43041	43041					0.09917392767874844
VGRHVGPC	8	Unmodified	_VGRHVGPC_					0	0	0			REV__ENST00000534922.5_1_12:133202008-133209092:-|nuORF	REV__ENST00000534922.5_1_12:133202008-133209092:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7139465212822	2	412.713422	823.412291	0.81554	0.00033659	0.88584	0.0003656	1.7014	0.00070218	412.71373903587164	58.752	0.35183	58.752	58.59	58.942	0					22	10	3	0	0	0	0.89051	1	24482	24482		2.3027	0	1	1430000	+		36990	13737	18357	18435	43042	43042					-0.006478467745637317
VGRIIAPLL	9	Unmodified	_VGRIIAPLL_					0	0	0		ENSG00000135953|ENST00000258436|MFSD9	ENSG00000135953|ENST00000258436|MFSD9	ENSG00000135953|ENST00000258436|MFSD9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	951.6345092654228	1	951.634963	950.627687	2.0579	0.0019584	-1.2053	-0.001147	0.85255	0.00081132	951.6336287602201	55.067	0.22362	55.387	55.233	55.457	0.32088					10	7	2	0	0	0	0.84963	1	23080	23080		0.6015	0	1	659880			36991	2695	18358	18436	43043	43043					0.15039817961883273
VGRIIARPF	9	Unmodified	_VGRIIARPF_					0	0	0		tr|A0A553SL15|A0A553SL15_NIACIPhosphopentomutaseOS=NialliacirculansOX=1397GN=deoBPE=3SV=1	tr|A0A553SL15|A0A553SL15_NIACIPhosphopentomutaseOS=NialliacirculansOX=1397GN=deoBPE=3SV=1	tr|A0A553SL15|A0A553SL15_NIACIPhosphopentomutaseOS=NialliacirculansOX=1397GN=deoBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8217040896416	2	514.821818	1027.62908	2.285	0.0011763	-2.5789	-0.0013277	-0.29391	-0.00015131	514.8221955695192	43.111	1.2481	45.032	44.751	45.999	1.9211					52	40	2	0	0	0	0.5697	1	18208	18208		12.532	0.89125	1	2314200			36992	16319	18359	18437	43044	43044					0.11637452050626962
VGRIPYDII	9	Unmodified	_VGRIPYDII_					0	0	0		ENST00000372572.5_2_1:42730832-42744035:-|nuORF	ENST00000372572.5_2_1:42730832-42744035:-|nuORF	ENST00000372572.5_2_1:42730832-42744035:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3047973513603	2	523.305667	1044.59678	1.6833	0.00088088	-3.2463	-0.0016988	-1.563	-0.00081795	523.3040221872185	66.245	0.95821	68.134	67.509	68.467	1.8889					54	30	2	0	0	0	0.76456	1	27801	27801		4.756	0.42677	1	1146300			36993	6141	18360	18438	43045	43045					0.07626619856978323
VGRKGGVGG	9	Unmodified	_VGRKGGVGG_					0	0	0			REV__nc|ENSG00000279245|Q8IWN6|FAM223A	REV__nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	786.4604980349541	1	786.458062	785.450785	2.8447	0.0022373	0.96666	0.00076024	3.8114	0.0029975	786.4583072424538	106.57	0.12814	106.73	106.67	106.8	0.16174					16	6	3	0	0	0	0.85403	1	45615	45615		0	0	1	37398000	+		36994	14562	18361	18439	43046	43046					0.049477821316258996
VGRKGGVGG	9	Unmodified	_VGRKGGVGG_					0	0	0			REV__nc|ENSG00000279245|Q8IWN6|FAM223A	REV__nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	786.458062	785.450785	2.6692	0.0020992	0.91795	0.00072193	3.5871	0.0028211	786.4585853177774	106.6	0.14053	106.76	106.68	106.82	0.15781	0.014787	-1.8346E-05	NaN	0	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	101990000	+		36995	14562	18361	18439							0.049477821316258996
VGRKGGVGG	9	Unmodified	_VGRKGGVGG_					0	0	0			REV__nc|ENSG00000279245|Q8IWN6|FAM223A	REV__nc|ENSG00000279245|Q8IWN6|FAM223A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	786.458062	785.450785	2.8447	0.0022373	0.96666	0.00076024	3.8114	0.0029975	786.4583072424538	106.57	0.12814	106.73	106.67	106.8	0.16174	-0.014787	1.9964E-05	NaN	0	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37398000	+		36996	14562	18361	18439							0.049477821316258996
VGRKKGPN	8	Unmodified	_VGRKKGPN_					0	0	0		ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	ENST00000297785.7_1_9:75524650-75527037:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2619811892509	2	428.261594	854.508634	1.042	0.00044623	0.3961	0.00016963	1.4381	0.00061587	428.26172948888245	73.476	0.98903	73.476	73.184	74.173	0					91	31	5	0	0	0	0.89178	1	30581	30581		0.69038	0.088878	1	296800000			36997	5737	18362	18440	43047	43047					0.0755604405703707
VGRKKKWLQFL	11	Unmodified	_VGRKKKWLQFL_					0	0	0			REV__ENSG00000181649|ENST00000314222|PHLDA2	REV__ENSG00000181649|ENST00000314222|PHLDA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2963744997978	3	468.294235	1401.86087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.033	1	30.315	29.815	30.815	1.2825								0	0	0	0.63775	1	12176	12176		0.094841	0	1		+		36998	11328	18363	18441	43048	43048					0.17601874681554364
VGRKKKWLQFL	11	Unmodified	_VGRKKKWLQFL_					0	0	0			REV__ENSG00000181649|ENST00000314222|PHLDA2	REV__ENSG00000181649|ENST00000314222|PHLDA2	MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2964355349541	3	468.294235	1401.86087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.402	1	35.227	34.727	35.727	1.8246								0	0	0	0.63775	1	14006	14006		0.094841	0	1		+		36999	11328	18363	18441	43049	43049					0.17601874681554364
VGRKKSKG	8	Unmodified	_VGRKKSKG_					0	0	0		ENSG00000142675|ENST00000361530|CNKSR1;nc|ENSG00000142675|Q969H4|CNKSR1	ENSG00000142675|ENST00000361530|CNKSR1	ENSG00000142675|ENST00000361530|CNKSR1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8890563845634	2	430.277244	858.539935	0.85391	0.00036742	1.7914	0.00077078	2.6453	0.0011382	430.2779453543787	29.745	0.95039	31.543	31.264	32.215	1.7987					48	30	2	0	0	0	2.3239	1	12705	12705		0.79363	0	1	2417700			37000	3002	18364	18442	43050	43050					0.1050061709113379
VGRKKSKG	8	Unmodified	_VGRKKSKG_					0	0	0		ENSG00000142675|ENST00000361530|CNKSR1;nc|ENSG00000142675|Q969H4|CNKSR1	ENSG00000142675|ENST00000361530|CNKSR1	ENSG00000142675|ENST00000361530|CNKSR1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	430.277244	858.539935	0.88777	0.00038199	2.1779	0.00093708	3.0656	0.0013191	430.27804048374486	30.114	1.0544	31.397	31.193	32.247	1.2825	-0.0734	0.00015978	NaN	0.79363	60	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2144500			37001	3002	18364	18442							0.1050061709113379
VGRKLVVF	8	Unmodified	_VGRKLVVF_					0	0	0		ENST00000438029.1_1_7:42951119-42951242:-|nuORF	ENST00000438029.1_1_7:42951119-42951242:-|nuORF	ENST00000438029.1_1_7:42951119-42951242:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	306.1920043826103	3	306.535884	916.585822	1.2157	0.00037266	2.2248	0.00068197	3.4405	0.0010546	306.5360134670246	64.121	0.12797	64.45	64.401	64.529	0.32899					5	3	2	0	0	0	2.3239	1	26879	26879		0.45834	0	1	219910			37002	6542	18365	18443	43051	43051					0.12419262273374443
VGRKRRHRL	9	Unmodified	_VGRKRRHRL_					0	0	0		nc|ENSG00000286105|A0A494BZU4|TMEM217B;ENST00000356757.6_1_6:37180235-37180745:-|nuORF	nc|ENSG00000286105|A0A494BZU4|TMEM217B	nc|ENSG00000286105|A0A494BZU4|TMEM217B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	393.5883056521416	3	393.254885	1176.74283	0.11737	4.6158E-05	-1.7396	-0.0006841	-1.6222	-0.00063794	393.2547040109434	31.479	0.70245	32.76	32.469	33.172	1.2813					29	22	2	0	0	0	0.85206	1	13199	13199		0.26902	0	1	851520			37003	5992	18366	18444	43052	43052					0.16152359936245375
VGRKRRHRL	9	Unmodified	_VGRKRRHRL_					0	0	0		nc|ENSG00000286105|A0A494BZU4|TMEM217B;ENST00000356757.6_1_6:37180235-37180745:-|nuORF	nc|ENSG00000286105|A0A494BZU4|TMEM217B	nc|ENSG00000286105|A0A494BZU4|TMEM217B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	393.254885	1176.74283	-0.34087	-0.00013405	-0.91211	-0.00035869	-1.253	-0.00049274	393.2541932344381	32.735	0.61867	32.735	32.225	32.844	0	-0.072608	0.00102	NaN	0.26902	31	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	918410			37004	5992	18366	18444							0.16152359936245375
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2014037966728	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1615	1	1.1615	0.66153	1.6615	0								0	0	0	1.0178	1	477	477		0.45834	0.18932	1		+		37005	8609	18367	18445	43053	43053					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.3291198611259	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7186	1	6.7186	6.2186	7.2186	0								0	0	0	1.0178	1	2760	2760		0.45834	0	1		+		37006	8609	18367	18445	43054	43054					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2009155154228	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.436	1	2.5585	2.0585	3.0585	0.12256								0	0	0	1.0178	1	1004	1004		0.45834	0	1		+		37007	8609	18367	18445	43055	43055					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2010986208916	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.026	1	3.1486	2.6486	3.6486	0.12256								0	0	0	1.0178	1	1249	1249		0.45834	0	1		+		37008	8609	18367	18445	43056	43056					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2010375857353	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.099	1	13.198	12.698	13.698	0.09944								0	0	0	1.0178	1	5437	5437		0.45834	0	1		+		37009	8609	18367	18445	43057	43057					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2016174197197	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.112	1	1.7653	1.2653	2.2653	0.65331								0	0	0	1.0178	1	455	455		0.45834	0	1		+		37010	8609	18367	18445	43058	43058					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2014037966728	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.88643	1	1.6348	1.1348	2.1348	0.7484								0	0	0	1.0178	1	366	366		0.45834	0	1		+		37011	8609	18367	18445	43059	43059					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2013427615166	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0326	1	1.781	1.281	2.281	0.7484								0	0	0	1.0178	1	427	427		0.45834	0	1		+		37012	8609	18367	18445	43060	43060					0.047508068684237514
VGRKRYHY	8	Unmodified	_VGRKRYHY_					0	0	0			REV__ENSG00000047617|ENST00000682330|ANO2	REV__ENSG00000047617|ENST00000682330|ANO2	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2015563845634	3	360.201675	1077.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.451	1	2.1994	1.6994	2.6994	0.7484								0	0	0	1.0178	1	600	600		0.45834	0	1		+		37013	8609	18367	18445	43061	43061					0.047508068684237514
VGRLDLEKLQR	11	Unmodified	_VGRLDLEKLQR_					0	0	0			REV__ENSG00000204510|ENST00000697200|PRAMEF7	REV__ENSG00000204510|ENST00000697200|PRAMEF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8972656130791	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0362	1	35243	35243		1.3295	0.13619	1	6935600	+		37014	11348	18368	18446	43062	43062					0.12807513162874784
VGRLFYILLL	10	Unmodified	_VGRLFYILLL_					0	0	0			REV__ENST00000493442.1_1_X:103420410-103430858:+|nuORF	REV__ENST00000493442.1_1_X:103420410-103430858:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1801940798759	3	402.925148	1205.75362	2.0873	0.00084103	-1.6602	-0.00066895	0.42708	0.00017208	403.2594766387692	49.948	0.31595	51.339	51.135	51.451	1.3911					13	9	2	0	0	0	0.1256	1	20898	20898		0.13989	0	1	698190	+		37015	13446	18369	18447	43063	43063					0.1589690474731924
VGRLKGKKIKL	11	Unmodified	_VGRLKGKKIKL_					0	0	0			REV__tr|A0A7D6VMC5|A0A7D6VMC5_9CLOTPhenylalanine--tRNAligasebetasubunitOS=ClostridiumintestinaleOX=36845GN=pheTPE=3SV=1	REV__tr|A0A7D6VMC5|A0A7D6VMC5_9CLOTPhenylalanine--tRNAligasebetasubunitOS=ClostridiumintestinaleOX=36845GN=pheTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	620.4392578005791	2	620.434807	1238.85506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.28	1	112.45	111.95	112.95	0.16914								0	0	0	0.63775	1	48716	48716		0.35063	0.043601	1		+		37016	15315	18370	18448	43064	43064					0.24518776169884404
VGRLKGKKIKL	11	Unmodified	_VGRLKGKKIKL_					0	0	0			REV__tr|A0A7D6VMC5|A0A7D6VMC5_9CLOTPhenylalanine--tRNAligasebetasubunitOS=ClostridiumintestinaleOX=36845GN=pheTPE=3SV=1	REV__tr|A0A7D6VMC5|A0A7D6VMC5_9CLOTPhenylalanine--tRNAligasebetasubunitOS=ClostridiumintestinaleOX=36845GN=pheTPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	620.4410278201103	2	620.434807	1238.85506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.17	1	114.34	113.84	114.84	0.17579								0	0	0	0.63775	1	49476	49476		0.35063	0.35063	1		+		37017	15315	18370	18448	43065	43065					0.24518776169884404
VGRLKLTSLV	10	Unmodified	_VGRLKLTSLV_					0	0	0			REV__tr|A0A7D6W3M8|A0A7D6W3M8_9CLOTAdenylosuccinatelyaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10790PE=3SV=1	REV__tr|A0A7D6W3M8|A0A7D6W3M8_9CLOTAdenylosuccinatelyaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10790PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2534362673759	3	362.572886	1084.69683	-0.12908	-4.68E-05	0.94228	0.00034165	0.81321	0.00029485	362.5732114146015	28.15	0.3613	29.429	29.276	29.637	1.2789					19	11	2	0	0	0	0.12559	1	11795	11795		0.15932	0	1	605840	+		37018	15614	18371	18449	43066	43066					0.15786857190778392
VGRLLHRQQ	9	Unmodified	_VGRLLHRQQ_					0	0	0			REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8322631716728	2	553.830706	1105.64686	1.1393	0.00063097	-1.5458	-0.00085609	-0.40649	-0.00022513	553.8296328426109	70.359	1.9249	70.359	69.047	70.972	0					100	61	3	0	0	0	0.84963	1	29032	29032		0.6015	0	1	1989600	+		37019	15938	18372	18450	43067	43067					0.09826167305504896
VGRLLHRQQ	9	Unmodified	_VGRLLHRQQ_					0	0	0			REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8313476443291	2	553.830706	1105.64686	1.3705	0.00075904	-0.06465	-3.5805E-05	1.3059	0.00072324	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	0.84963	1	30994	30994		0.6015	0	1	2354100	+		37020	15938	18372	18450	43068	43068					0.09826167305504896
VGRLLHRQQ	9	Unmodified	_VGRLLHRQQ_					0	0	0			REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8308593630791	2	553.830706	1105.64686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.012	1	71.012	70.512	71.512	0								0	0	0	0.42693	1	29576	29576		0.6015	0	1		+		37021	15938	18372	18450	43069	43069					0.09826167305504896
VGRLLHRQQ	9	Unmodified	_VGRLLHRQQ_					0	0	0			REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	REV__ZHX3|p.R780_Q781insGVPC|1|0.03|ENSG00000174306|chr20:41202576-41202577|-/ACATGGTACTCC|inframe_insertion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8307983279228	2	553.830706	1105.64686	1.2808	0.00070934	-1.0285	-0.00056959	0.25232	0.00013974	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.84963	1	29583	29583		0.6015	0	1	2160700	+		37022	15938	18372	18450	43070	43070					0.09826167305504896
VGRLPRLP	8	Unmodified	_VGRLPRLP_					0	0	0		ENST00000547344.5_1_12:58159078-58160873:-|nuORF;ENST00000228606.8_1_12:58158304-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1986572146416	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.842	1	33.137	32.637	33.637	0.29431								0	0	0	1.0178	1	13788	13788		0.45834	0	1				37023	5542	18373	18451	43071	43071					0.119294939878273
VGRLPRLP	8	Unmodified	_VGRLPRLP_					0	0	0		ENST00000547344.5_1_12:58159078-58160873:-|nuORF;ENST00000228606.8_1_12:58158304-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	303.1992370486259	3	303.199383	906.57632	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.188	1	34.485	33.985	34.985	0.29701								0	0	0	1.0178	1	14357	14357		0.45834	0	1				37024	5542	18373	18451	43072	43072					0.119294939878273
VGRLPRLPRVP	11	Unmodified	_VGRLPRLPRVP_					0	0	0		ENST00000547344.5_1_12:58159078-58160873:-|nuORF;ENST00000228606.8_1_12:58158304-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	ENST00000547344.5_1_12:58159078-58160873:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	630.4047119021416	2	630.406581	1258.79861	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.42	1	102.6	102.1	103.1	0.18066								0	0	0	0.63775	1	43079	43079		1.4819	0.28856	1				37025	5542	18374	18452	43073	43073					0.17956148333178135
VGRLQARARP	10	Unmodified	_VGRLQARARP_					0	0	0			REV__ENST00000606895.1_1_17:62206992-62207148:-|nuORF	REV__ENST00000606895.1_1_17:62206992-62207148:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3459960818291	2	562.343981	1122.67341	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.684	1	69.006	68.506	69.506	0.32224								0	0	0	0.66166	1	28752	28752		1.6526	0.32309	1		+		37026	14140	18375	18453	43074	43074					0.11697856196815337
VGRLRLAD	8	Unmodified	_VGRLRLAD_					0	0	0			REV__ENST00000528878.1_1_7:64465346-64465520:-|nuORF	REV__ENST00000528878.1_1_7:64465346-64465520:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2754699587822	2	450.274701	898.534849	2.842	0.0012797	-0.54925	-0.00024732	2.2928	0.0010324	450.27427004922237	76.175	1.3392	76.496	75.925	77.264	0.32163					108	42	5	0	0	0	0.89198	2	31822	31822;31861		0	0	1	239710000	+		37027	13688	18376	18454	43075;43076	43075					0.08152313228492858
VGRLWAKP	8	Unmodified	_VGRLWAKP_					0	0	0			REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	464.2191955447197	2	463.782162	925.549771	1.3549	0.00062838	1.9957	0.00092555	3.3506	0.0015539	463.78297437721955	21.903	0.35721	22.126	21.962	22.32	0.223					20	11	2	0	0	0	2.3239	1	9193	9193		5.7604	3.7007	1	978050	+		37028	13397	18377	18455	43077	43077					0.08401805096491444
VGRLWAKP	8	Unmodified	_VGRLWAKP_					0	0	0			REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	463.782162	925.549771	1.2081	0.00056031	2.2721	0.0010538	3.4802	0.0016141	463.78332584884464	22.291	0.3101	22.291	22.153	22.463	0	0.14809	0.00024574	NaN	5.7604	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1075000	+		37029	13397	18377	18455							0.08401805096491444
VGRLWAKP	8	Unmodified	_VGRLWAKP_					0	0	0			REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	REV__ENST00000487316.1_1_2:25015871-25015946:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	463.782162	925.549771	0.72828	0.00033776	2.3522	0.0010909	3.0805	0.0014287	463.78300215610994	20.503	0.29432	22.077	21.969	22.263	1.5748	-0.065581	0.00032006	NaN	5.7604	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1135400	+		37030	13397	18377	18455							0.08401805096491444
VGRLWSNK	8	Unmodified	_VGRLWSNK_					0	0	0			REV__NBPF15|p.D137Kfs*20|1|0.04|ENSG00000266338|chr1:144436979-144436980|-/ATTTT|frameshift_variant	REV__NBPF15|p.D137Kfs*20|1|0.04|ENSG00000266338|chr1:144436979-144436980|-/ATTTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.5188476443291	3	320.518893	958.534849	-0.49084	-0.00015732	-0.29345	-9.4056E-05	-0.78429	-0.00025138	320.51893590951516	19.614	0.28595	20.672	20.476	20.762	1.0585					12	8	2	0	0	0	0.89008	1	8170	8170		1.6526	0	1	212700	+		37031	14374	18378	18456	43078	43078					0.053923132285035535
VGRMHMQWVS	10	Unmodified	_VGRMHMQWVS_					0	0	0		ENSG00000235631|ENST00000434824|RNF148	ENSG00000235631|ENST00000434824|RNF148	ENSG00000235631|ENST00000434824|RNF148	MSMS	GG20161007_CRH_Patient100_A02_01	1	615.8011962771416	2	615.79716	1229.57977	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.385	1	77.385	76.885	77.885	0								0	0	0	0.66166	1	32214	32214		1.6526	0	1				37032	5316	18379	18457	43079	43079					-0.02583947292123412
VGRNKRFR	8	Unmodified	_VGRNKRFR_					0	0	0		ENST00000215754.7_1_22:24237348-24237408:+|nuORF	ENST00000215754.7_1_22:24237348-24237408:+|nuORF	ENST00000215754.7_1_22:24237348-24237408:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	344.2072021365166	3	344.877303	1031.61008	-0.79769	-0.0002751	2.4193	0.00083436	1.6216	0.00055926	344.8789621241134	17.343	0.19871	18.241	18.083	18.282	0.89794					9	6	2	0	0	0	2.3239	1	7178	7178		0	0	1	186450			37033	5514	18380	18458	43080	43080					0.09553915479591524
VGRPARTLI	9	Unmodified	_VGRPARTLI_					0	0	0		ENST00000471477.1_1_9:101706343-101748400:+|nuORF;ENSG00000204291|ENST00000375001|COL15A1	ENST00000471477.1_1_9:101706343-101748400:+|nuORF	ENST00000471477.1_1_9:101706343-101748400:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.0052978396416	3	328.210059	981.608348	-0.52232	-0.00017143	0.16592	5.4456E-05	-0.3564	-0.00011697	328.21012939257804	11.291	0.1569	12.053	11.973	12.13	0.76165					6	4	2	0	0	0	0.11954	1	4702	4702		0.26902	0	1	110800			37034	5131	18381	18459	43081	43081					0.11680861670993181
VGRPGAGG	8	Unmodified	_VGRPGAGG_					0	0	0			REV__chr1:225567414-225652962|89|11.87|0.3|5.3|-|2|ENAH,None|1	REV__chr1:225567414-225652962|89|11.87|0.3|5.3|-|2|ENAH,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	670.3688842654228	1	670.363099	669.355822	2.969	0.0019903	4.4472	0.0029813	7.4163	0.0049716	670.3655419635787	98.579	0.15029	98.835	98.734	98.885	0.25636					8	4	3	0	0	0	0.89176	1	41494	41494		0.79363	0	1	2848200	+		37035	8219	18382	18460	43082	43082					0.007918486604353348
VGRPIVWGL	9	Unmodified	_VGRPIVWGL_					0	0	0		ENSG00000101323|ENST00000378789|HAO1	ENSG00000101323|ENST00000378789|HAO1	ENSG00000101323|ENST00000378789|HAO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3070251345634	2	498.803094	995.591636	0.60482	0.00030169	1.476	0.00073624	2.0808	0.0010379	498.8035621145939	37.703	0.36124	39.523	39.308	39.67	1.8202					36	11	4	0	0	0	0.83213	1	15752	15752		2.0598	0	1	10928000			37036	1338	18383	18461	43083	43083					0.09366360785031702
VGRPKHRR	8	Unmodified	_VGRPKHRR_					0	0	0		ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.3136169314384	2	503.312484	1004.61041	2.3854	0.0012006	-0.34389	-0.00017308	2.0415	0.0010275	503.3121047558747	89.509	0.44083	89.509	89.338	89.778	0					22	13	2	0	0	0	0.89176	1	37474	37474		0.79363	0	1	2389600			37037	19	18384	18462	43084	43084					0.10829335199457546
VGRPKHRR	8	Unmodified	_VGRPKHRR_					0	0	0		ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	ACTR1B|p.M45R|1|0.52|ENSG00000115073|chr2:97660626-97660626|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3139526247978	2	503.312484	1004.61041	6.0508	0.0030454	-2.717	-0.0013675	3.3337	0.0016779	503.3109658645261	88.619	0.51717	89.675	89.434	89.951	1.0562					26	15	3	0	0	0	0.89176	1	37330	37330		0.79363	0	1	1804600			37038	19	18384	18462	43085	43085					0.10829335199457546
VGRPRHQVR	9	Unmodified	_VGRPRHQVR_					0	0	0		ENST00000482085.1_1_10:90708534-90712518:-|nuORF	ENST00000482085.1_1_10:90708534-90712518:-|nuORF	ENST00000482085.1_1_10:90708534-90712518:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	552.8297607302666	2	552.828498	1103.64244	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.966	1	33.26	32.76	33.76	0.29431								0	0	0	0.32813	1	13842	13842		15.847	5.0233	1				37039	6831	18385	18463	43086	43086					0.09476702882602694
VGRPSAGH	8	Unmodified	_VGRPSAGH_					0	0	0		ENST00000514292.5_3_4:20702103-20702205:+|nuORF	ENST00000514292.5_3_4:20702103-20702205:+|nuORF	ENST00000514292.5_3_4:20702103-20702205:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2838622927666	2	390.709194	779.403835	-0.0020135	-7.867E-07	3.346	0.0013073	3.344	0.0013065	390.7106706132504	14.7	0.11787	15.597	15.502	15.62	0.89664					5	3	2	0	0	0	2.3239	1	6104	6104		2.8892	0	1	367660			37040	7049	18386	18464	43087	43087					0.005309225804694506
VGRQAFWRII	10	Unmodified	_VGRQAFWRII_					0	0	0			REV__tr|A0A553SRR4|A0A553SRR4_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_01450PE=4SV=1	REV__tr|A0A553SRR4|A0A553SRR4_NIACIAldo/ketoreductaseOS=NialliacirculansOX=1397GN=CEQ21_01450PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	623.3638183474541	2	623.364382	1244.71421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.63	1	100.82	100.32	101.32	0.18047								0	0	0	0.66166	1	42346	42346		1.6526	0.32309	1		+		37041	15170	18387	18465	43088	43088					0.10164197516473905
VGRRAAKA	8	Unmodified	_VGRRAAKA_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	828.5186645388603	1	828.516245	827.508969	1.6086	0.0013328	-2.3672	-0.0019613	-0.75858	-0.00062849	828.5141476072347	70.492	0.56968	70.492	70.179	70.749	0					58	18	4	0	0	0	0.89176	2	29266	29266;29414		0.79363	0	1	37599000			37042	7935	18388	18466	43089;43090	43089					0.08831463776880355
VGRRAAKA	8	Unmodified	_VGRRAAKA_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	828.5170165896416	1	828.516245	827.508969	1.2702	0.0010524	-1.2814	-0.0010616	-0.011169	-9.2535E-06	828.515033073431	70.253	0.54221	70.575	70.288	70.83	0.32224					53	17	4	0	0	0	0.89176	3	29323	29323;29369;29475		0.79363	0	1	34400000			37043	7935	18388	18466	43091;43092;43093	43091					0.08831463776880355
VGRRAAKA	8	Unmodified	_VGRRAAKA_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	828.5159789919853	1	828.516245	827.508969	1.77	0.0014665	-1.1291	-0.00093551	0.64089	0.00053099	828.5149509380567	69.349	0.49539	70.715	70.443	70.939	1.3657					35	16	3	0	0	0	0.89176	2	29050	29050;29095		0.79363	0	1	19561000			37044	7935	18388	18466	43094;43095	43094					0.08831463776880355
VGRRAAKA	8	Unmodified	_VGRRAAKA_					0	0	0		nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	nc|ENSG00000177138|Q8IZU0-2|FAM9B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	828.5175048708916	1	828.516245	827.508969	1.0063	0.00083373	-0.09669	-8.0109E-05	0.90961	0.00075362	828.515922732094	68.932	0.45173	70.785	70.558	71.009	1.853					36	14	3	0	0	0	0.89176	1	28997	28997		0.79363	0	1	15507000			37045	7935	18388	18466	43096	43096					0.08831463776880355
VGRRGCSK	8	Unmodified	_VGRRGCSK_					0	0	0		ENST00000375249.4_1_9:99220702-99227653:+|nuORF;ENST00000375251.7_1_9:99212589-99246760:+|nuORF	ENST00000375249.4_1_9:99220702-99227653:+|nuORF	ENST00000375249.4_1_9:99220702-99227653:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	2	431.737428	861.460304	0.30299	0.00013081	0.89541	0.00038658	1.1984	0.00051739	431.73731593073313	15.358	0.15494	16.184	16.107	16.262	0.82643					6	4	2	0	0	0	2.3239	1	6355	6355		0.79363	0	1	640560			37046	6180	18389	18467	43097	43097					0.02403227145487108
VGRRGNGP	8	Unmodified	_VGRRGNGP_					0	0	0		ENSG00000038295|ENST00000061240|TLL1;TLL1|p.T303Pfs*30|1|0.05|ENSG00000038295|chr4:166008038-166008038|A/-|frameshift_variant;nc|ENSG00000038295|O43897-2|TLL1	ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	812.4490234255791	1	812.44856	811.441283	1.6117	0.0013094	0.045295	3.68E-05	1.657	0.0013462	812.4485136394871	70.124	0.34317	70.124	69.929	70.272	0					22	10	3	0	0	0	0.89176	2	29168	29168;29224		0.79363	0	1	1551400			37047	653	18390	18468	43098;43099	43098					0.028020138460874477
VGRRGNGP	8	Unmodified	_VGRRGNGP_					0	0	0		ENSG00000038295|ENST00000061240|TLL1;TLL1|p.T303Pfs*30|1|0.05|ENSG00000038295|chr4:166008038-166008038|A/-|frameshift_variant;nc|ENSG00000038295|O43897-2|TLL1	ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	812.4507934451103	1	812.44856	811.441283	1.2694	0.0010313	-0.16911	-0.0001374	1.1003	0.00089392	812.4474746662195	70.012	0.34489	70.334	70.129	70.474	0.32224					22	10	3	0	0	0	0.89176	2	29282	29282;29334		0.79363	0	1	2022300			37048	653	18390	18468	43100;43101	43100					0.028020138460874477
VGRRPRPFQ	9	Unmodified	_VGRRPRPFQ_					0	0	0		ENST00000554150.5_1_12:57146238-57157040:+|nuORF;ENST00000556650.5_3_12:57146238-57157040:+|nuORF	ENST00000554150.5_1_12:57146238-57157040:+|nuORF	ENST00000554150.5_1_12:57146238-57157040:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1012756228447	3	371.552708	1111.63629	-0.17499	-6.5017E-05	-1.0316	-0.00038328	-1.2065	-0.00044829	371.5522383863901	13.371	0.34368	14.199	13.974	14.317	0.82789					23	11	3	0	0	0	0.11954	1	5578	5578		0.26902	0	1	711270			37049	7286	18391	18469	43102	43102					0.08494184651067371
VGRRRKKSV	9	Unmodified	_VGRRRKKSV_					0	0	0			REV__AluSz6_dup38393|chr16:21444399-21444625:-|1.2027506456233914|0.2558602288677095|2.23|428.0|2|1|sense	REV__AluSz6_dup38393|chr16:21444399-21444625:-|1.2027506456233914|0.2558602288677095|2.23|428.0|2|1|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3538696169853	2	543.354348	1084.69414	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120	1	120.22	119.72	120.72	0.21597								0	0	0	0.42693	1	51829	51829		0.6015	0	1		+		37050	8117	18392	18470	43103	43103					0.15518446576515998
VGRRRKKSV	9	Unmodified	_VGRRRKKSV_					0	0	0			REV__AluSz6_dup38393|chr16:21444399-21444625:-|1.2027506456233914|0.2558602288677095|2.23|428.0|2|1|sense	REV__AluSz6_dup38393|chr16:21444399-21444625:-|1.2027506456233914|0.2558602288677095|2.23|428.0|2|1|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2532531619072	3	362.571991	1084.69414	0.34448	0.0001249	2.9133	0.0010563	3.2578	0.0011812	362.572973171244	27.602	0.36929	29.377	29.233	29.602	1.7754					17	11	2	0	0	0	0.11938	1	11551	11551		1.1933	0.41681	1	469580	+		37051	8117	18392	18470	43104	43104					0.15518446576515998
VGRRTTFRL	9	Unmodified	_VGRRTTFRL_					0	0	0		nc|ENSG00000064225|Q9Y274-2|ST3GAL6;ENSG00000064225|ENST00000483910|ST3GAL6	nc|ENSG00000064225|Q9Y274-2|ST3GAL6	nc|ENSG00000064225|Q9Y274-2|ST3GAL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.3330566287041	2	553.333082	1104.65161	1.5201	0.00084111	-0.34247	-0.0001895	1.1776	0.00065161	553.3325778273991	80.961	0.52822	80.961	80.728	81.257	0					36	16	3	0	0	0	0.84963	1	33671	33671		0.6015	0	1	1457800			37052	767	18393	18471	43105	43105					0.10347051448275124
VGRRWARL	8	Unmodified	_VGRRWARL_					0	0	0			REV__nc|ENSG00000171462|Q6UY11-2|DLK2	REV__nc|ENSG00000171462|Q6UY11-2|DLK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	507.3116943240166	2	507.30941	1012.60427	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.04	1	91.444	90.944	91.944	1.4045								0	0	0	1.0178	1	37929	37929		2.8892	0	1		+		37053	11026	18394	18472	43106	43106					0.09846816967933592
VGRRWLQL	8	Unmodified	_VGRRWLQL_					0	0	0			REV__ENSG00000185215|ENST00000560869|TNFAIP2	REV__ENSG00000185215|ENST00000560869|TNFAIP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.3030273318291	3	343.210171	1026.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8384	1	1.8384	1.3384	2.3384	0								0	0	0	1.0178	1	754	754		0.45834	0	1		+		37054	8257	18395	18473	43107	43107					0.0964428139084248
VGRSFEPIIK	10	Unmodified	_VGRSFEPIIK_					0	0	0		nc|ENSG00000179988|Q8IV42-2|PSTK	nc|ENSG00000179988|Q8IV42-2|PSTK	nc|ENSG00000179988|Q8IV42-2|PSTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8395873904228	2	573.337498	1144.66044	1.0613	0.00060851	0.8013	0.00045941	1.8626	0.0010679	573.3376905297348	27.638	0.46414	28.917	28.657	29.122	1.2789					39	14	3	0	0	0	0.78005	1	11502	11502		14.405	2.1647	1	4067000			37055	7938	18396	18474	43108	43108					0.0938998029407685
VGRSFEPIIK	10	Unmodified	_VGRSFEPIIK_					0	0	0		nc|ENSG00000179988|Q8IV42-2|PSTK	nc|ENSG00000179988|Q8IV42-2|PSTK	nc|ENSG00000179988|Q8IV42-2|PSTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.8951293826103	3	382.560758	1144.66044	0.44902	0.00017178	1.3147	0.00050295	1.7637	0.00067473	382.56136107009127	27.073	0.89448	28.82	28.495	29.39	1.747					89	28	5	0	0	0	0.8325	1	11481	11481		5.0475	0	1	47119000			37056	7938	18396	18474	43109	43109					0.0938998029407685
VGRSKYDSG	9	Unmodified	_VGRSKYDSG_					0	0	0			REV__ENST00000398117.1_1_18:60792312-60792384:-|nuORF	REV__ENST00000398117.1_1_18:60792312-60792384:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	484.7882568240166	2	484.743431	967.472308	1.6481	0.00079889	-1.5103	-0.0007321	0.1378	6.6798E-05	484.7429234654278	25.594	0.33906	25.846	25.705	26.044	0.25197					30	10	4	0	0	0	0.11916	1	10769	10769		1.8442	1.0506	1	3627400	+		37057	12869	18397	18475	43110	43110					-0.012728776303333689
VGRSRRRGAAK	11	Unmodified	_VGRSRRRGAAK_					0	0	0		UTP3|p.W64Lfs*21|1|0.13|ENSG00000132467|chr4:70688867-70688868|-/TA|frameshift_variant;ENSG00000132467|ENST00000254803|UTP3	UTP3|p.W64Lfs*21|1|0.13|ENSG00000132467|chr4:70688867-70688868|-/TA|frameshift_variant	UTP3|p.W64Lfs*21|1|0.13|ENSG00000132467|chr4:70688867-70688868|-/TA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.2502929568291	3	405.2498	1212.72757	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.068	1	99.068	98.568	99.568	0								0	0	0	0.63775	1	41458	41458		0.40827	0	1				37058	2534	18398	18476	43111	43111					0.12971448348412196
VGRTARGLN	9	Unmodified	_VGRTARGLN_					0	0	0		ENST00000476149.1_1_2:118582113-118584081:+|nuORF;ENSG00000088205|ENST00000263239|DDX18	ENST00000476149.1_1_2:118582113-118584081:+|nuORF	ENST00000476149.1_1_2:118582113-118584081:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2775451540947	2	472.275232	942.535912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.765	1	73.09	72.59	73.59	0.32494								0	0	0	0.42693	1	30442	30442		1.8442	0	1				37059	1096	18399	18477	43112	43112					0.062345275974166725
VGRTAVRIQRH	11	Unmodified	_VGRTAVRIQRH_					0	0	0			REV__ENST00000392781.6_1_3:160822182-160823112:-|nuORF	REV__ENST00000392781.6_1_3:160822182-160823112:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	646.8881103396416	2	646.886544	1291.75853	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.512	1	14.512	14.012	15.012	0								0	0	0	0.63775	1	6021	6021		1.4819	0	1		+		37060	12803	18400	18478	43113	43113					0.12432601662635534
VGRVGPRA	8	Unmodified	_VGRVGPRA_					0	0	0			REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	811.4887573122978	1	811.489696	810.48242	1.6335	0.0013255	-2.246	-0.0018226	-0.61253	-0.00049706	811.4875195740478	70.461	0.47693	70.461	70.21	70.687	0					37	15	3	0	0	0	0.89176	3	29300	29300;29347;29391		0.79363	0	1	11370000	+		37061	13040	18401	18479	43114;43115;43116	43114					0.06959774885547176
VGRVGPRA	8	Unmodified	_VGRVGPRA_					0	0	0			REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	REV__ENST00000433688.2_2_11:63531028-63531832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	811.4894286990166	1	811.489696	810.48242	1.2625	0.0010245	-0.76222	-0.00061854	0.50029	0.00040598	811.4885738809381	70.284	0.44913	70.606	70.35	70.799	0.32224					36	14	3	0	0	0	0.89176	2	29372	29372;29423		0.79363	0	1	9282700	+		37062	13040	18401	18479	43117;43118	43117					0.06959774885547176
VGRVRGYA	8	Unmodified	_VGRVRGYA_					0	0	0			REV__ENSG00000169992|ENST00000302926|NLGN2	REV__ENSG00000169992|ENST00000302926|NLGN2	MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2540771365166	2	439.253769	876.492984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.253	1	34.531	34.031	35.031	1.2782								0	0	0	1.0178	1	13944	13944		2.5775	0.27475	1		+		37063	10970	18402	18480	43119	43119					0.049797575399907146
VGRVTRRHRE	10	Unmodified	_VGRVTRRHRE_					0	0	0		ENST00000528796.5_1_11:3400300-3400357:-|nuORF	ENST00000528796.5_1_11:3400300-3400357:-|nuORF	ENST00000528796.5_1_11:3400300-3400357:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3704711794853	2	633.368518	1264.72248	1.7681	0.0011199	0.5604	0.00035494	2.3285	0.0014748	633.3684879528284	77.983	0.63612	78.292	77.974	78.61	0.30933					31	19	2	0	0	0	0.89803	1	32534	32534		0.45834	0	1	704790			37064	7150	18403	18481	43120	43120					0.1007114448577795
VGRVWVLWV	9	Unmodified	_VGRVWVLWV_					0	0	0		ENST00000305513.11_1_17:1683821-1683905:-|nuORF	ENST00000305513.11_1_17:1683821-1683905:-|nuORF	ENST00000305513.11_1_17:1683821-1683905:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.3497802615166	2	557.332019	1112.64948	2.1129	0.0011776	1.3501	0.00075248	3.4631	0.0019301	557.3340325386779	86.223	0.6992	86.223	85.852	86.551	0					64	22	4	0	0	0	0.84963	1	35838	35838		0.6015	0	1	20318000			37065	5774	18404	18482	43121	43121					0.09766622710435513
VGRWTQPR	8	Unmodified	_VGRWTQPR_					0	0	0		ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2792541384697	2	500.277775	998.540997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.487	1	33.784	33.284	34.284	0.29701								0	0	0	1.0178	1	14061	14061		2.3027	0.24298	1				37066	7099	18405	18483	43122	43122					0.04166831460042886
VGRWTQPR	8	Unmodified	_VGRWTQPR_					0	0	0		ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2807494997978	2	500.277775	998.540997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.628	1	33.925	33.425	34.425	0.29701								0	0	0	1.0178	1	14120	14120		4.756	2.1785	1				37067	7099	18405	18483	43123	43123					0.04166831460042886
VGRWTQPR	8	Unmodified	_VGRWTQPR_					0	0	0		ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	ENST00000523366.1_1_5:172353721-172353871:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2803527712822	2	500.277775	998.540997	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.92	1	34.217	33.717	34.717	0.29701								0	0	0	1.0178	1	14243	14243		4.756	2.1785	1				37068	7099	18405	18483	43124	43124					0.04166831460042886
VGRYTFKRF	9	Unmodified	_VGRYTFKRF_					0	0	0			REV__ENSG00000115268|ENST00000592588|RPS15	REV__ENSG00000115268|ENST00000592588|RPS15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2845031619072	3	391.889097	1172.64546	0.1171	4.589E-05	1.5315	0.00060016	1.6486	0.00064606	391.8886436907794	31.246	0.12513	32.527	32.438	32.563	1.2813					5	3	2	0	0	0	0.11938	1	13093	13093		1.1933	0.9575	1	286600	+		37069	9433	18406	18484	43125	43125					0.06604533216727759
VGSAPLKV	8	Unmodified	_VGSAPLKV_					0	0	0			REV__CELSR2-KIAA1324|1|fusion	REV__CELSR2-KIAA1324|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	385.1543151736259	2	385.742171	769.469789	0.026649	1.028E-05	-2.8799	-0.0011109	-2.8533	-0.0011006	385.74130437412987	58.395	0.58096	58.395	58.235	58.816	0					23	17	2	0	0	0	2.3239	1	24471	24471		0	0	1	713070	+		37070	8200	18407	18485	43126	43126					0.07583318702654651
VGSCRPCTCSS	11	Unmodified	_VGSCRPCTCSS_					0	0	0			REV__ENST00000227638.7_1_11:93911559-93911631:+|nuORF	REV__ENST00000227638.7_1_11:93911559-93911631:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	550.2178222537041	2	550.220094	1098.42563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.178	1	34.178	33.678	34.678	0								0	0	0	0.63775	1	14325	14325		1.3295	0.63916	1		+		37071	12094	18408	18486	43127	43127					-0.11964144839794244
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1788513064384	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0018	1	3.1244	2.6244	3.6244	0.12256								0	0	0	1.0178	1	1239	1239		0.79363	0	1				37072	7331	18409	18487	43128	43128					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1789123415947	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.245	1	16.375	15.875	16.875	0.13022								0	0	0	1.0178	1	6743	6743		0.79363	0	1				37073	7331	18409	18487	43129	43129					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1786071658134	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.993	1	42.319	41.819	42.819	1.3254								0	0	0	1.0178	1	17191	17191		0.79363	0	1				37074	7331	18409	18487	43130	43130					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1786987185478	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.119	1	42.444	41.944	42.944	1.3254								0	0	0	1.0178	1	17243	17243		0.79363	0	1				37075	7331	18409	18487	43131	43131					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.1798889040947	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.095	1	44.449	43.949	44.949	1.3536								0	0	0	1.0178	1	18061	18061		0.79363	0	1				37076	7331	18409	18487	43132	43132					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1774780154228	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.269	1	34.094	33.594	34.594	1.8246								0	0	0	1.0178	1	13526	13526		0.79363	0	1				37077	7331	18409	18487	43133	43133					-0.06929770233841737
VGSFPECA	8	Unmodified	_VGSFPECA_					0	0	0		ENST00000561412.1_1_14:24630531-24631537:+|nuORF;ENST00000560852.1_1_14:24630531-24632747:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	ENST00000561412.1_1_14:24630531-24631537:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	405.1770202517509	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.403	1	53.378	52.878	53.878	1.9753								0	0	0	1.0178	1	21542	21542		0.79363	0	1				37078	7331	18409	18487	43134	43134					-0.06929770233841737
VGSFRAVDEL	10	Unmodified	_VGSFRAVDEL_					0	0	0			REV__tr|A0A7D7A2V9|A0A7D7A2V9_9CLOTProbablebutyratekinaseOS=ClostridiumintestinaleOX=36845GN=bukPE=3SV=1	REV__tr|A0A7D7A2V9|A0A7D7A2V9_9CLOTProbablebutyratekinaseOS=ClostridiumintestinaleOX=36845GN=bukPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	546.2712890505791	2	546.787838	1091.56112	2.4719	0.0013516	1.8217	0.00099607	4.2935	0.0023477	546.7892365263506	84.291	0.31844	84.552	84.343	84.662	0.26083					14	9	2	0	0	0	0.12493	1	35169	35169		10.824	2.9138	1	590460	+		37079	15854	18410	18488	43135	43135					0.01900537609321873
VGSFRAVDEL	10	Unmodified	_VGSFRAVDEL_					0	0	0			REV__tr|A0A7D7A2V9|A0A7D7A2V9_9CLOTProbablebutyratekinaseOS=ClostridiumintestinaleOX=36845GN=bukPE=3SV=1	REV__tr|A0A7D7A2V9|A0A7D7A2V9_9CLOTProbablebutyratekinaseOS=ClostridiumintestinaleOX=36845GN=bukPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	546.787838	1091.56112	2.3488	0.0012843	-0.043305	-2.3679E-05	2.3055	0.0012606	546.7880433761549	82.94	0.40417	84.61	84.386	84.79	1.67	-0.015109	-0.0017024	NaN	10.824	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2974000	+		37080	15854	18410	18488							0.01900537609321873
VGSGATKK	8	Unmodified	_VGSGATKK_					0	0	0		tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	747.4375488162041	1	747.435929	746.428653	2.4449	0.0018274	-0.30532	-0.0002282	2.1395	0.0015992	747.43527878374	86.323	0.95539	87.449	86.557	87.512	1.1265					69	39	2	0	0	0	0.89176	7	36041	36041;36101;36153;36206;36259;36314;36379		0.79363	0	1	36257000			37081	16380	18411	18489	43136;43137;43138;43139;43140;43141;43142	43136					0.04529557663181549
VGSGATKK	8	Unmodified	_VGSGATKK_					0	0	0		tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	tr|A0A553SMN1|A0A553SMN1_NIACID-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidaseOS=NialliacirculansOX=1397GN=dacBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	747.4360839724541	1	747.435929	746.428653	3.0087	0.0022488	-0.50056	-0.00037414	2.5081	0.0018746	747.4349688006043	85.92	0.9772	87.467	86.582	87.56	1.547					63	40	2	0	0	0	0.89176	5	35835	35835;35960;36013;36091;36158		0.79363	0	1	26408000			37082	16380	18411	18489	43143;43144;43145;43146;43147	43143					0.04529557663181549
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1606323122978	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.346	1	19.539	19.039	20.039	0.19342								0	0	0	1.0178	1	8035	8035		0.79363	0	1				37083	3512	18412	18490	43148	43148					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1610900759697	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.759	1	19.952	19.452	20.452	0.19342								0	0	0	1.0178	1	8210	8210		0.79363	0	1				37084	3512	18412	18490	43149	43149					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1608154177666	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6012	1	2.3496	1.8496	2.8496	0.7484								0	0	0	1.0178	1	662	662		0.79363	0	1				37085	3512	18412	18490	43150	43150					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1603576540947	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.995	1	14.823	14.323	15.323	0.82789								0	0	0	1.0178	1	5804	5804		0.79363	0	1				37086	3512	18412	18490	43151	43151					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1598083376884	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.204	1	15.101	14.601	15.601	0.89664								0	0	0	1.0178	1	5891	5891		0.79363	0	1				37087	3512	18412	18490	43152	43152					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1598388552666	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.417	1	15.314	14.814	15.814	0.89664								0	0	0	1.0178	1	5982	5982		0.79363	0	1				37088	3512	18412	18490	43153	43153					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1597778201103	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.69	1	15.587	15.087	16.087	0.89664								0	0	0	1.0178	1	6096	6096		0.79363	0	1				37089	3512	18412	18490	43154	43154					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1597167849541	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.809	1	15.706	15.206	16.206	0.89664								0	0	0	1.0178	1	6145	6145		0.79363	0	1				37090	3512	18412	18490	43155	43155					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1606628298759	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.997	1	15.894	15.394	16.394	0.89664								0	0	0	1.0178	1	6222	6222		0.79363	0	1				37091	3512	18412	18490	43156	43156					-0.03244430610584459
VGSGGAHA	8	Unmodified	_VGSGGAHA_					0	0	0		nc|ENSG00000158882|Q969M1-2|TOMM40L;ENSG00000158882|ENST00000367988|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	nc|ENSG00000158882|Q969M1-2|TOMM40L	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1604797244072	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.305	1	20.829	20.329	21.329	1.5237								0	0	0	1.0178	1	8024	8024		0.79363	0	1				37092	3512	18412	18490	43157	43157					-0.03244430610584459
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	872.5432006716728	1	872.54246	871.535184	1.7221	0.0015026	-1.7992	-0.0015699	-0.077142	-6.731E-05	872.540770733529	73.507	0.51829	73.507	73.216	73.734	0					45	16	4	0	0	0	0.89176	2	30535	30535;30583		0.79363	0	1	17822000	+		37093	8730	18413	18491	43158;43159	43158					0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	872.5444824099541	1	872.54246	871.535184	2.2635	0.001975	-1.5055	-0.0013136	0.758	0.00066138	872.5409647205555	73.26	0.509	73.585	73.34	73.849	0.32494					41	16	4	0	0	0	0.89176	2	30584	30584;30738		0.79363	0	1	20973000	+		37094	8730	18413	18491	43160;43161	43160					0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7753173708916	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89178	1	30678	30678		0.69038	0	1	532050000	+		37095	8730	18413	18491	43162	43162					0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	872.5452148318291	1	872.54246	871.535184	2.5297	0.0022073	-0.14089	-0.00012293	2.3888	0.0020843	872.5424769314861	72.387	0.45779	73.717	73.455	73.913	1.3297					36	14	3	0	0	0	0.89176	3	30313	30313;30359;30411		0.79363	0	1	6756900	+		37096	8730	18413	18491	43163;43164;43165	43163					0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	872.5432006716728	1	872.54246	871.535184	2.5591	0.0022329	-0.27652	-0.00024128	2.2826	0.0019917	872.5421029192095	71.977	0.45465	73.801	73.57	74.024	1.824					30	14	3	0	0	0	0.89176	3	30164	30164;30210;30258		0.79363	0	1	7983900	+		37097	8730	18413	18491	43166;43167;43168	43166					0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	872.54246	871.535184	1.7221	0.0015026	-1.7992	-0.0015699	-0.077142	-6.731E-05	872.540770733529	73.507	0.51829	73.507	73.216	73.734	0	-0.14541	-0.00072997	NaN	0.79363	45	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17822000	+		37098	8730	18413	18491							0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	872.54246	871.535184	2.2635	0.001975	-1.5055	-0.0013136	0.758	0.00066138	872.5409647205555	73.26	0.509	73.585	73.34	73.849	0.32494	-0.067242	-0.00047366	NaN	0.79363	41	16	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20973000	+		37099	8730	18413	18491							0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	872.54246	871.535184	2.5297	0.0022073	-0.14089	-0.00012293	2.3888	0.0020843	872.5424769314861	72.387	0.45779	73.717	73.455	73.913	1.3297	0.064206	0.00071701	NaN	0.79363	36	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6756900	+		37100	8730	18413	18491							0.0942773294835888
VGSGKLRR	8	Unmodified	_VGSGKLRR_					0	0	0			REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	REV__RDH11|p.T226K|1|0.05|ENSG00000072042|chr14:67685192-67685192|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	872.54246	871.535184	2.5591	0.0022329	-0.27652	-0.00024128	2.2826	0.0019917	872.5421029192095	71.977	0.45465	73.801	73.57	74.024	1.824	0.14844	0.00059867	NaN	0.79363	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7983900	+		37101	8730	18413	18491							0.0942773294835888
VGSGKLTF	8	Unmodified	_VGSGKLTF_					0	0	0		ENST00000488735.1_1_3:78742324-78763649:-|nuORF	ENST00000488735.1_1_3:78742324-78763649:-|nuORF	ENST00000488735.1_1_3:78742324-78763649:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	405.1791564822197	2	404.731803	807.449054	-0.58981	-0.00023871	-0.14447	-5.8471E-05	-0.73428	-0.00029719	404.7319474882846	12.249	0.1591	12.943	12.852	13.012	0.69396					7	4	2	0	0	0	2.3239	1	5065	5065		0.79363	0	1	118210			37102	6889	18414	18492	43169	43169					0.03762728322976727
VGSGQEWAYI	10	Unmodified	_VGSGQEWAYI_					0	0	0			REV__ENSG00000111335|ENST00000392583|OAS2	REV__ENSG00000111335|ENST00000392583|OAS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2685424685478	2	555.266739	1108.51892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.869	1	76.651	76.151	77.151	1.7817								0	0	0	0.65773	1	31404	31404		7.2892	0.56607	1		+		37103	9324	18415	18493	43170	43170					-0.03099437799073712
VGSGRRKK	8	Unmodified	_VGSGRRKK_					0	0	0			REV__nc|ENSG00000204624|Q9P2K9-2|DISP3	REV__nc|ENSG00000204624|Q9P2K9-2|DISP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1208984255791	2	444.280318	886.546083	3.0589	0.001359	1.3565	0.00060268	4.4155	0.0019617	444.2808199361799	85.57	0.24825	85.823	85.695	85.943	0.25227					14	7	3	0	0	0	2.3239	1	35767	35767		0	0	1	701950	+		37104	11795	18416	18494	43171	43171					0.09827135322643699
VGSHRRVRL	9	Unmodified	_VGSHRRVRL_					0	0	0		ENSG00000234186|ENST00000505035|C16orf82;nc|nan|Q7Z2V1|C16orf82	ENSG00000234186|ENST00000505035|C16orf82	ENSG00000234186|ENST00000505035|C16orf82	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3301879763603	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.84963	1	29367	29367		0.6015	0	1	3238400			37105	5311	18417	18495	43172	43172					0.1110158702535955
VGSHRRVRL	9	Unmodified	_VGSHRRVRL_					0	0	0		ENSG00000234186|ENST00000505035|C16orf82;nc|nan|Q7Z2V1|C16orf82	ENSG00000234186|ENST00000505035|C16orf82	ENSG00000234186|ENST00000505035|C16orf82	MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3320190310478	2	540.330873	1078.64719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.622	1	68.622	68.122	69.122	0								0	0	0	0.42693	1	28577	28577		2.3027	0.24298	1				37106	5311	18417	18495	43173	43173					0.1110158702535955
VGSHWVHL	8	Unmodified	_VGSHWVHL_					0	0	0			REV__ENSG00000196208|ENST00000381486|GREB1	REV__ENSG00000196208|ENST00000381486|GREB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	466.9014465212822	2	467.748319	933.482085	2.0833	0.00097447	-3.2444	-0.0015176	-1.1611	-0.00054311	467.74744587109285	54.128	0.22212	56.096	55.97	56.192	1.9684					8	6	2	0	0	0	2.3239	1	22686	22686		5.2307	0	1	612500	+		37107	11620	18418	18496	43174	43174					0.01268355165700541
VGSILQDDS	9	Unmodified	_VGSILQDDS_					0	0	0			REV__nc|ENSG00000148219|O75129-6|ASTN2	REV__nc|ENSG00000148219|O75129-6|ASTN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2310058474541	2	467.229822	932.445091	2.8155	0.0013155	0.82921	0.00038743	3.6447	0.0017029	467.2296012460013	62.833	0.18606	64.777	64.628	64.814	1.9444					8	5	2	0	0	0	0.46905	1	26373	26373		16.942	4.4107	1	524410	+		37108	8145	18419	18497	43175	43175					-0.02383405961381868
VGSIPLRLPK	10	Unmodified	_VGSIPLRLPK_					0	0	0			REV__nc|ENSG00000185324|Q15131-4|CDK10	REV__nc|ENSG00000185324|Q15131-4|CDK10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3511840701103	2	540.350409	1078.68626	4.263	0.0023035	-3.2267	-0.0017436	1.0363	0.00055994	540.3487033900553	93.109	0.29391	93.981	93.834	94.128	0.87176					16	8	2	0	0	0	0.89803	1	39199	39199		0.45834	0	1	762860	+		37109	14507	18420	18498	43176	43176					0.15006874536356918
VGSKFIVMAT	10	Oxidation (M)	_VGSKFIVM(Oxidation (M))AT_		VGSKFIVM(1)AT		VGSKFIVM(44)AT	0	0	1			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7908813357353	2	534.791535	1067.56852	2.0396	0.0010907	-0.45973	-0.00024586	1.5798	0.00084489	534.791137648957	46.734	0.6596	48.116	47.75	48.41	1.3825					58	20	4	0	0	0	0.24174	1	19560	19560		43.858	15.371	1	4585100	+		37110	9236	18421	18499	43177	43177		117			0.037435538853969774
VGSKFIVMAT	10	Oxidation (M)	_VGSKFIVM(Oxidation (M))AT_		VGSKFIVM(1)AT		VGSKFIVM(44)AT	0	0	1			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7910644412041	2	534.791535	1067.56852	1.728	0.00092412	0.27319	0.0001461	2.0012	0.0010702	534.7915540417514	46.304	0.62039	48.274	47.852	48.472	1.9703					51	19	4	0	0	0	0.24174	1	19386	19386		43.858	15.371	1	5149800	+		37111	9236	18421	18499	43178	43178		117			0.037435538853969774
VGSKFIVMAT	10	Oxidation (M)	_VGSKFIVM(Oxidation (M))AT_					0	0	1			REV__ENSG00000107611|ENST00000377833|CUBN	REV__ENSG00000107611|ENST00000377833|CUBN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	534.791535	1067.56852	2.0396	0.0010907	-0.45973	-0.00024586	1.5798	0.00084489	534.791137648957	46.734	0.6596	48.116	47.75	48.41	1.3825	-0.079025	-0.0003124	NaN	43.858	58	20	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4585100	+		37112	9236	18421	18499				117			0.037435538853969774
VGSKSTIL	8	Unmodified	_VGSKSTIL_					0	0	0		nc|ENSG00000133401|O15018-2|PDZD2;ENSG00000133401|ENST00000438447|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	nc|ENSG00000133401|O15018-2|PDZD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	804.4886962771416	1	804.482545	803.475269	2.7491	0.0022116	3.8875	0.0031274	6.6365	0.005339	804.4857865543113	101.11	0.3591	101.29	101.1	101.46	0.18047					17	11	2	0	0	0	0.88504	1	42516	42516		5.7604	0	1	13640000			37113	2571	18422	18500	43179	43179					0.0656699749448535
VGSKTADPCCY	11	Unmodified	_VGSKTADPCCY_					0	0	0		ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	ENSG00000112996|ENST00000507110|MRPS30	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.8606140017509	3	381.83182	1142.47363	2.0174	0.00077029	-0.081996	-3.1309E-05	1.9354	0.00073898	381.8319232303775	44.155	0.22058	46.099	45.957	46.177	1.9438					9	6	2	0	0	0	0.14606	1	18483	18483		1.4551	0.24029	1	468330			37114	1803	18423	18501	43180	43180					-0.091907476481083
VGSLIGIALYL	11	Unmodified	_VGSLIGIALYL_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	559.8459350466728	2	559.844625	1117.6747	1.3729	0.00076862	1.7045	0.00095428	3.0775	0.0017229	559.8458901897634	74.972	0.25024	74.972	74.84	75.091	0					13	7	2	0	0	0	0.84637	1	31215	31215		13.042	0.80181	1	747400			37115	7739	18424	18502	43181	43181					0.12056632722351424
VGSLIGIALYL	11	Unmodified	_VGSLIGIALYL_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.8467895388603	2	559.844625	1117.6747	2.5345	0.0014189	1.1745	0.00065753	3.709	0.0020764	559.8453128189683	74.462	0.24936	74.787	74.646	74.895	0.32464					12	7	2	0	0	0	0.74096	1	31156	31156		17.113	4.0704	1	930160			37116	7739	18424	18502	43182	43182					0.12056632722351424
VGSLIGIALYL	11	Unmodified	_VGSLIGIALYL_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|155|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.8475829958916	2	559.844625	1117.6747	2.6192	0.0014664	1.4952	0.00083706	4.1144	0.0023034	559.8454875893034	72.874	0.41289	74.684	74.48	74.893	1.8101					28	12	3	0	0	0	0.13258	1	30540	30540		49.933	8.0934	1	4299600			37117	7739	18424	18502	43183	43183					0.12056632722351424
VGSLIVKVS	9	Unmodified	_VGSLIVKVS_					0	0	0		PCDHB9|p.F282Lfs*8|1|0.4|ENSG00000177839|chr5:141188159-141188159|T/-|frameshift_variant;ENSG00000177839|ENST00000316105|PCDHB9	PCDHB9|p.F282Lfs*8|1|0.4|ENSG00000177839|chr5:141188159-141188159|T/-|frameshift_variant	PCDHB9|p.F282Lfs*8|1|0.4|ENSG00000177839|chr5:141188159-141188159|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2903930544853	2	451.289485	900.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.35	1	40.646	40.146	41.146	1.2961								0	0	0	0.29347	1	16507	16507		19.257	1.1106	1				37118	4464	18425	18503	43184	43184					0.11015832453995245
VGSLPDIMHK	10	Unmodified	_VGSLPDIMHK_					0	0	0			REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	REV__tr|A0A7D7A5L2|A0A7D7A5L2_9CLOTAAAfamilyATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06535PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	366.1992065310478	3	366.198831	1095.57467	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.593	1	13.593	13.093	14.093	0								0	0	0	0.65836	1	5633	5633		3.5871	0	1		+		37119	15884	18426	18504	43185	43185					0.03070072116929623
VGSLSHQSGP	10	Unmodified	_VGSLSHQSGP_					0	0	0		ENST00000428809.5_1_21:15399915-15456441:+|nuORF	ENST00000428809.5_1_21:15399915-15456441:+|nuORF	ENST00000428809.5_1_21:15399915-15456441:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7430297732353	2	484.743431	967.472308	1.4951	0.00072473	-1.9743	-0.00095705	-0.47926	-0.00023232	484.74269491470244	24.443	0.24636	25.684	25.547	25.794	1.241					21	7	3	0	0	0	0.87343	1	10193	10193		4.3292	0.73274	1	4795100			37120	6483	18427	18505	43186	43186					-0.012728776303333689
VGSLSHQSGP	10	Unmodified	_VGSLSHQSGP_					0	0	0		ENST00000428809.5_1_21:15399915-15456441:+|nuORF	ENST00000428809.5_1_21:15399915-15456441:+|nuORF	ENST00000428809.5_1_21:15399915-15456441:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	484.7440978884697	2	484.743431	967.472308	0.49744	0.00024113	-2.2615	-0.0010963	-1.7641	-0.00085514	484.74244458966626	24.012	0.30943	25.697	25.536	25.846	1.6845					28	9	4	0	0	0	0.87343	2	9991	9991;10036		4.3292	0.73274	1	4415100			37121	6483	18427	18505	43187;43188	43187					-0.012728776303333689
VGSPAPIKHI	10	Unmodified	_VGSPAPIKHI_					0	0	0			REV__ENSG00000145736|ENST00000274400|GTF2H2	REV__ENSG00000145736|ENST00000274400|GTF2H2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8057739138603	2	509.805834	1017.59712	2.4598	0.001254	-2.3563	-0.0012013	0.10345	5.2741E-05	509.8047462228799	80.742	0.39948	82.438	82.272	82.671	1.6959					25	12	3	0	0	0	0.87699	1	33835	33835		3.9444	1.6417	1	1464900	+		37122	10284	18428	18506	43189	43189					0.08902039576821608
VGSPSSIK	8	Unmodified	_VGSPSSIK_					0	0	0		nc|ENSG00000204815|Q96NG3-2|ODAD4;ENSG00000204815|ENST00000377540|ODAD4	nc|ENSG00000204815|Q96NG3-2|ODAD4	nc|ENSG00000204815|Q96NG3-2|ODAD4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	388.1274597048759	2	387.721436	773.428318	-1.0032	-0.00038898	1.412	0.00054745	0.40871	0.00015846	387.7220653648924	11.374	0.22007	12.043	11.918	12.138	0.66934					9	6	2	0	0	0	2.3239	1	4714	4714		0.69038	0	1	202680			37123	5161	18429	18507	43190	43190					0.032541379433382644
VGSRLAEA	8	Unmodified	_VGSRLAEA_					0	0	0			REV__ENST00000597342.5_1_19:58397299-58400219:-|nuORF	REV__ENST00000597342.5_1_19:58397299-58400219:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1804992556572	2	401.72451	801.434466	2.6453	0.0010627	-0.78992	-0.00031733	1.8554	0.00074535	401.72442845376816	61.281	0.18054	62.699	62.563	62.744	1.4177					7	5	2	0	0	0	2.3239	1	25681	25681		0.69038	0	1	985730	+		37124	14099	18430	18508	43191	43191					0.02580656174836804
VGSRMWYMT	9	Unmodified	_VGSRMWYMT_					0	0	0			REV__KLHL15|p.K581Sfs*46|1|0.06|ENSG00000174010|chrX:23987994-23987994|T/-|frameshift_variant	REV__KLHL15|p.K581Sfs*46|1|0.06|ENSG00000174010|chrX:23987994-23987994|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7610351443291	2	565.759712	1129.50487	5.2487	0.0029695	-2.9102	-0.0016465	2.3385	0.001323	565.7578447615016	89.518	0.46837	90.538	90.3	90.769	1.0199					59	14	6	0	0	0	0.59203	1	37694	37694		11.64	0.81637	1	3262100	+		37125	14242	18431	18509	43192	43192					-0.054701298233567286
VGSRRGRRRTV	11	Unmodified	_VGSRRGRRRTV_					0	0	0		ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	650.3970214724541	2	650.395067	1298.77558	2.3072	0.0015006	-0.19869	-0.00012923	2.1085	0.0013713	650.3947838765138	81.483	2.4977	81.483	80.791	83.289	0					178	81	4	0	0	0	1.0084	1	34126	34126		3.2813	1.6287	1	9280600			37126	7097	18432	18510	43193	43193					0.13814522268444307
VGSRRGRRRTV	11	Unmodified	_VGSRRGRRRTV_					0	0	0		ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	ENST00000523094.5_2_5:157285974-157286100:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	650.3962890505791	2	650.395067	1298.77558	1.9699	0.0012812	0.37898	0.00024649	2.3489	0.0015277	650.3950632853981	81.315	2.5797	81.605	80.747	83.326	0.29055					187	83	4	0	0	0	1.0362	1	34251	34251		1.3295	0.13619	1	10064000			37127	7097	18432	18510	43194	43194					0.13814522268444307
VGSSLVCALSV	11	Unmodified	_VGSSLVCALSV_					0	0	0			REV__ENST00000602529.1_1_1:228463365-228463719:-|nuORF	REV__ENST00000602529.1_1_1:228463365-228463719:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2892333865166	2	517.781167	1033.54778	0.62021	0.00032114	1.5375	0.00079609	2.1577	0.0011172	517.7810929123162	21.681	0.40518	23.297	23.05	23.455	1.6158					27	13	3	0	0	0	0.70499	1	9019	9019		18.146	4.2403	1	2147800	+		37128	14120	18433	18511	43195	43195					0.032349635057244086
VGSSPLRPLS	10	Unmodified	_VGSSPLRPLS_					0	0	0		ENST00000514191.5_1_14:73404686-73407184:+|nuORF	ENST00000514191.5_1_14:73404686-73407184:+|nuORF	ENST00000514191.5_1_14:73404686-73407184:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7930175662041	2	506.792924	1011.57129	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.442	1	15.212	14.712	15.712	0.76937								0	0	0	0.6607	1	6003	6003		3.2813	0	1				37129	7048	18434	18512	43196	43196					0.06597145334569632
VGSSTVFLLA	10	Unmodified	_VGSSTVFLLA_					0	0	0		ENST00000456102.5_1_20:35806883-35832332:+|nuORF	ENST00000456102.5_1_20:35806883-35832332:+|nuORF	ENST00000456102.5_1_20:35806883-35832332:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.2843200564384	2	497.2844	992.554247	0.54015	0.00026861	1.5116	0.00075168	2.0517	0.0010203	497.28492437190664	53.479	0.2992	55.449	55.234	55.533	1.9697					13	9	2	0	0	0	0.77604	1	22395	22395		14.838	2.3067	1	1908300			37130	6642	18435	18513	43197	43197					0.05767224728765541
VGSTASGK	8	Unmodified	_VGSTASGK_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	354.2448608279228	2	353.690136	705.365718	0.090663	3.2067E-05	2.9188	0.0010324	3.0095	0.0010644	353.6915190132323	16.911	0.74599	17.062	16.584	17.33	0.15094					34	25	2	0	0	0	2.3239	1	6877	6877		0.79363	0	1	1123700	+		37131	10072	18436	18514	43198	43198					0.0012499187515686572
VGSTASGK	8	Unmodified	_VGSTASGK_					0	0	0			REV__ENSG00000138658|ENST00000505019|ZGRF1	REV__ENSG00000138658|ENST00000505019|ZGRF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	353.690136	705.365718	-2.1628	-0.00076496	5.0483	0.0017855	2.8855	0.0010206	353.6929476493748	17.061	1.758	17.061	15.682	17.44	0	-0.00059837	0.0011583	NaN	0.79363	78	55	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1367000	+		37132	10072	18436	18514							0.0012499187515686572
VGSTTTSV	8	Unmodified	_VGSTTTSV_					0	0	0			REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	REV__nc|ENSG00000060237|Q9H4A3-4|WNK1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.1969787478447	2	376.195251	750.375948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.261	1	48.591	48.091	49.091	0.33034								0	0	0	1.0178	1	20237	20237		2.8892	2.0956	1		+		37133	8649	18437	18515	43199	43199					-0.009224451902696273
VGSVANHY	8	Unmodified	_VGSVANHY_					0	0	0			REV__tr|A0A553SNT6|A0A553SNT6_NIACIInsulinasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_25155PE=4SV=1	REV__tr|A0A553SNT6|A0A553SNT6_NIACIInsulinasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_25155PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7082092165947	2	423.70886	845.403166	-0.18455	-7.8194E-05	-0.43221	-0.00018313	-0.61676	-0.00026132	423.7092926892964	16.509	0.63331	16.509	16.213	16.847	0					60	19	5	0	0	0	0.88958	1	6901	6901		2.8892	0	1	3092900	+		37134	15063	18438	18516	43200	43200					-0.025719168592445385
VGSVANHY	8	Unmodified	_VGSVANHY_					0	0	0			REV__tr|A0A553SNT6|A0A553SNT6_NIACIInsulinasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_25155PE=4SV=1	REV__tr|A0A553SNT6|A0A553SNT6_NIACIInsulinasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_25155PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	424.3058959841728	2	423.70886	845.403166	-0.18455	-7.8194E-05	-0.43221	-0.00018313	-0.61676	-0.00026132	423.7092926892964	16.509	0.63331	16.509	16.213	16.847	0					60	19	5	0	0	0	2.3239	1	6979	6979		2.8892	0	1	3092900	+		37135	15063	18438	18516	43201	43201					-0.025719168592445385
VGSVDCTLVL	10	Unmodified	_VGSVDCTLVL_					0	0	0			REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.2668945193291	2	503.267893	1004.52123	1.2192	0.00061359	-2.7908	-0.0014045	-1.5716	-0.00079095	503.26617541472996	56.532	0.30843	57.946	57.784	58.093	1.4145					20	9	3	0	0	0	0.22411	1	23703	23703		46.021	15.384	1	2010800	+		37136	10342	18439	18517	43202	43202					0.019152746143845434
VGSVDCTLVL	10	Unmodified	_VGSVDCTLVL_					0	0	0			REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	REV__nc|ENSG00000148357|Q8NDA2-4|HMCN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	503.3042785525322	2	503.267893	1004.52123	1.2192	0.00061359	-2.7908	-0.0014045	-1.5716	-0.00079095	503.26617541472996	56.532	0.30843	57.946	57.784	58.093	1.4145					20	9	3	0	0	0	0.11298	1	23678	23678		46.021	9.8939	1	2010800	+		37137	10342	18439	18517	43203	43203					0.019152746143845434
VGSVVLEG	8	Unmodified	_VGSVVLEG_					0	0	0			REV__ENST00000522792.1_1_5:138268134-138269775:+|nuORF	REV__ENST00000522792.1_1_5:138268134-138269775:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2184326052666	2	380.215986	758.417419	0.42024	0.00015978	3.6216	0.001377	4.0419	0.0015368	380.21728529081764	26.691	0.85982	28.438	28.129	28.988	1.747					70	28	3	0	0	0	0.89008	1	11267	11267		2.5775	0	1	15550000	+		37138	8602	18440	18518	43204	43204					0.02854735569053446
VGSWQYWKY	9	Unmodified	_VGSWQYWKY_					0	0	0			REV__tr|A0A553ST33|A0A553ST33_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_04000PE=3SV=1	REV__tr|A0A553ST33|A0A553ST33_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_04000PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	608.2104980349541	2	608.792924	1215.57129	0.19379	0.00011798	0.63505	0.00038662	0.82884	0.00050459	608.7932930882129	14.988	0.12504	15.884	15.805	15.93	0.89664					6	3	2	0	0	0	0.11946	1	6187	6187		0.6015	0	1	489740	+		37139	15226	18441	18519	43205	43205					-0.027868546654417514
VGSWQYWKY	9	Unmodified	_VGSWQYWKY_					0	0	0			REV__tr|A0A553ST33|A0A553ST33_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_04000PE=3SV=1	REV__tr|A0A553ST33|A0A553ST33_NIACIDMTfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_04000PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	608.792924	1215.57129	0.10161	6.1861E-05	1.7996	0.0010956	1.9012	0.0011575	608.7939869885346	15.11	0.15486	15.88	15.77	15.924	0.76937	-0.0023328	0.00055795	NaN	0.6015	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365960	+		37140	15226	18441	18519							-0.027868546654417514
VGSYVHYDRK	10	Unmodified	_VGSYVHYDRK_					0	0	0		tr|A0A553SL72|A0A553SL72_NIACIChorismatesynthaseOS=NialliacirculansOX=1397GN=aroCPE=3SV=1	tr|A0A553SL72|A0A553SL72_NIACIChorismatesynthaseOS=NialliacirculansOX=1397GN=aroCPE=3SV=1	tr|A0A553SL72|A0A553SL72_NIACIChorismatesynthaseOS=NialliacirculansOX=1397GN=aroCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5442077517509	3	408.543767	1222.60947	0.032474	1.3267E-05	0.91196	0.00037258	0.94443	0.00038584	408.5441732319128	12.746	0.55992	13.533	13.303	13.863	0.78751					51	18	4	0	0	0	0.87699	1	5233	5233		1.9064	0	1	3462600			37141	16324	18442	18520	43206	43206					0.007070312492032826
VGTAEGDK	8	Unmodified	_VGTAEGDK_					0	0	0			REV__ENSG00000181143|ENST00000397910|MUC16	REV__ENSG00000181143|ENST00000397910|MUC16	MSMS	GG20161007_CRH_Patient100_W632_01	3	388.6921264529228	2	388.692875	775.371197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.081	1	19.06	18.56	19.56	0.97922								0	0	0	1.0178	1	7528	7528		9.3474	0	1		+		37142	11315	18443	18521	43207	43207					-0.025473293330492197
VGTASSPVN	9	Unmodified	_VGTASSPVN_					0	0	0		nc|ENSG00000103197|P49815-8|TSC2;ENST00000461648.2_1_16:2098014-2103834:+|nuORF	nc|ENSG00000103197|P49815-8|TSC2	nc|ENSG00000103197|P49815-8|TSC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2119933962822	2	416.213975	830.413397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.646	1	27.646	27.146	28.146	0								0	0	0	0.42693	1	11564	11564		3.9444	0	1				37143	6674	18444	18522	43208	43208					-0.008593539246589899
VGTELGVL	8	Unmodified	_VGTELGVL_					0	0	0		ENST00000281038.9_1_11:78285613-78285736:-|nuORF	ENST00000281038.9_1_11:78285613-78285736:-|nuORF	ENST00000281038.9_1_11:78285613-78285736:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	395.0651428103447	2	394.231636	786.448719	1.4027	0.00055299	3.076	0.0012127	4.4787	0.0017656	394.23273955953493	34.431	0.18763	34.728	34.599	34.787	0.29701					8	6	2	0	0	0	2.3239	1	14409	14409		0.79363	0	1	700550			37144	5700	18445	18523	43209	43209					0.046953086031635394
VGTEVELG	8	Unmodified	_VGTEVELG_					0	0	0			REV__tr|A0A553STY2|A0A553STY2_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05845PE=4SV=1	REV__tr|A0A553STY2|A0A553STY2_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_05845PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1801940798759	2	402.210901	802.407249	1.0175	0.00040927	0.2971	0.0001195	1.3147	0.00052877	402.21032870713873	25.889	0.93994	26.141	25.675	26.614	0.25197					40	30	3	0	0	0	2.3239	1	10991	10991		0	0	1	1335700	+		37145	15269	18446	18524	43210	43210					-0.0018587215618026676
VGTEVTVSLQ	10	Unmodified	_VGTEVTVSLQ_					0	0	0		ENST00000327158.4_1_17:904373-904769:+|nuORF	ENST00000327158.4_1_17:904373-904769:+|nuORF	ENST00000327158.4_1_17:904373-904769:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7826415896416	2	516.782222	1031.54989	0.424	0.00021912	-0.46147	-0.00023848	-0.03747	-1.9364E-05	516.7818340870119	15.42	0.48019	16.247	15.981	16.462	0.82643					48	20	4	0	0	0	0.22411	1	6399	6399		46.021	2.1627	1	5417200			37146	5874	18447	18525	43211	43211					0.035377155151991246
VGTFLILK	8	Unmodified	_VGTFLILK_					0	0	0		tr|A0A553SLV0|A0A553SLV0_NIACIAmmoniumtransporterOS=NialliacirculansOX=1397GN=CEQ21_21390PE=3SV=1	tr|A0A553SLV0|A0A553SLV0_NIACIAmmoniumtransporterOS=NialliacirculansOX=1397GN=CEQ21_21390PE=3SV=1	tr|A0A553SLV0|A0A553SLV0_NIACIAmmoniumtransporterOS=NialliacirculansOX=1397GN=CEQ21_21390PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1206237673759	2	445.789121	889.56369	1.5359	0.00068467	1.2491	0.00055685	2.785	0.0012415	445.79000244413874	42.282	0.18731	42.282	42.197	42.384	0					7	5	2	0	0	0	2.3239	1	17731	17731		0.69038	0.69038	1	299280			37147	16356	18448	18526	43212	43212					0.11449037804959517
VGTGFSFG	8	Unmodified	_VGTGFSFG_					0	0	0			REV__nc|ENSG00000124789|P49790-2|NUP153	REV__nc|ENSG00000124789|P49790-2|NUP153	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	771.3687621951103	1	771.367181	770.359904	1.6958	0.0013081	-0.090593	-6.9881E-05	1.6052	0.0012382	771.367299069592	78.407	0.43375	80.142	79.855	80.289	1.735					26	13	3	0	0	0	0.88504	1	32895	32895		5.7604	0.52976	1	2795500	+		37148	9657	18449	18527	43213	43213					-0.034461066365224724
VGTHKLMH	8	Unmodified	_VGTHKLMH_					0	0	0			REV__ENSG00000066422|ENST00000312938|ZBTB11	REV__ENSG00000066422|ENST00000312938|ZBTB11	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	308.9003173708916	3	308.169095	921.485456	-3.3157	-0.0010218	1.9106	0.00058879	-1.4051	-0.00043301	308.16992977803517	17.082	0.8154	17.082	16.563	17.378	0					30	25	2	0	0	0	2.3239	1	6890	6890		0.45834	0	1	344940	+		37149	8684	18450	18528	43214	43214					0.021572819480638827
VGTHPFFFFFG	11	Unmodified	_VGTHPFFFFFG_					0	0	0			REV__ENST00000481710.5_1_21:35774452-35774542:+|nuORF	REV__ENST00000481710.5_1_21:35774452-35774542:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8830444216728	3	434.88172	1301.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.415	1	13.109	12.609	13.609	0.69396								0	0	0	0.63775	1	5157	5157		0.45452	0	1		+		37150	13362	18451	18529	43215	43215					-0.015416912516911907
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3842040896416	2	628.383303	1254.75205	2.1497	0.0013508	-0.73091	-0.00045929	1.4187	0.00089152	628.3828488279131	76.026	0.50329	76.026	75.723	76.226	0					28	15	2	0	0	0	1.0362	1	31606	31606		1.3295	0.72803	1	1120500	+		37151	14794	18452	18530	43216	43216					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3845703005791	2	628.383303	1254.75205	2.1238	0.0013346	-1.2793	-0.00080386	0.84458	0.00053072	628.3824234295301	76.999	0.80923	76.999	76.254	77.063	0					36	25	2	0	0	0	1.0362	1	31918	31918		1.3295	0.13619	1	2041900	+		37152	14794	18452	18530	43217	43217					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3834106326103	2	628.383303	1254.75205	2.1091	0.0013253	-1.2131	-0.00076232	0.89596	0.00056301	628.3824332062296	77.21	1.061	77.21	76.688	77.749	0					67	33	3	0	0	0	1.0362	1	32262	32262		1.3295	0	1	2391000	+		37153	14794	18452	18530	43218	43218					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3832885622978	2	628.383303	1254.75205	2.0099	0.001263	-0.69703	-0.000438	1.3129	0.00082499	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	1.0362	2	31754	31754;32013		1.3295	0.87119	1	2978200	+		37154	14794	18452	18530	43219;43220	43219					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3842040896416	2	628.383303	1254.75205	2.3591	0.0014824	-1.133	-0.00071193	1.2261	0.00077046	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	1.0362	1	33024	33024		1.3295	0.13619	1	7119900	+		37155	14794	18452	18530	43221	43221					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3835937380791	2	628.383303	1254.75205	2.432	0.0015282	-0.69237	-0.00043507	1.7396	0.0010932	628.3830062415306	79.751	0.80569	81.002	80.645	81.45	1.2512					46	25	3	0	0	0	1.0362	2	33407	33407;33470		1.3295	0.25807	1	1559600	+		37156	14794	18452	18530	43222;43223	43222					0.13486663711250912
VGTIDLLRRGR	11	Unmodified	_VGTIDLLRRGR_					0	0	0			REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	REV__tr|A0A553SHG0|A0A553SHG0_NIACISporulationproteinYabPOS=NialliacirculansOX=1397GN=yabPPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3840820193291	2	628.383303	1254.75205	1.1909	0.00074836	-0.10159	-6.3838E-05	1.0893	0.00068453	628.3833030097504	79.502	0.67828	81.219	80.765	81.444	1.7167					46	21	3	0	0	0	1.0362	1	33258	33258		1.3295	0.13619	1	1388400	+		37157	14794	18452	18530	43224	43224					0.13486663711250912
VGTIGLPAP	9	Unmodified	_VGTIGLPAP_					0	0	0		ENST00000299084.8_1_15:38544573-38544729:+|nuORF	ENST00000299084.8_1_15:38544573-38544729:+|nuORF	ENST00000299084.8_1_15:38544573-38544729:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7491943240166	2	412.747453	823.480354	1.5164	0.00062587	2.4748	0.0010215	3.9911	0.0016473	412.7489398732957	42.629	0.24964	43.969	43.827	44.077	1.3399					11	7	2	0	0	0	0.76456	1	17880	17880		4.756	2.1785	1	1571700			37158	5745	18453	18531	43225	43225					0.06155301357080134
VGTIIKLAHQ	10	Unmodified	_VGTIIKLAHQ_					0	0	0		tr|A0A7D6W1X6|A0A7D6W1X6_9CLOTEALdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04360PE=4SV=1	tr|A0A7D6W1X6|A0A7D6W1X6_9CLOTEALdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04360PE=4SV=1	tr|A0A7D6W1X6|A0A7D6W1X6_9CLOTEALdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3317748904228	2	540.332216	1078.64988	1.5193	0.00082091	-2.2831	-0.0012336	-0.7638	-0.0004127	540.3310724957718	71.75	1.2066	71.75	71.446	72.653	0					53	37	2	0	0	0	0.89803	1	29927	29927		1.6526	0	1	1220500			37159	17025	18454	18532	43226	43226					0.1136999763964468
VGTITLPS	8	Unmodified	_VGTITLPS_					0	0	0		ENST00000374059.7_1_9:117188078-117188264:-|nuORF	ENST00000374059.7_1_9:117188078-117188264:-|nuORF	ENST00000374059.7_1_9:117188078-117188264:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	394.5584289431572	2	394.231636	786.448719	0.03585	1.4133E-05	4.3229	0.0017042	4.3587	0.0017183	394.23330418609805	41.521	0.51424	41.521	41.145	41.659	0					20	15	2	0	0	0	2.3239	1	17321	17321		2.5775	0	1	363520			37160	6168	18455	18533	43227	43227					0.04695308603140802
VGTIVICIEL	10	Unmodified	_VGTIVICIEL_					0	0	0		tr|A0A7D6VT85|A0A7D6VT85_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08070PE=4SV=1	tr|A0A7D6VT85|A0A7D6VT85_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08070PE=4SV=1	tr|A0A7D6VT85|A0A7D6VT85_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08070PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	530.9878417849541	2	530.309561	1058.60457	4.2024	0.0022286	3.2487	0.0017228	7.4511	0.0039514	530.3114102497605	93.403	0.41763	94.274	94.031	94.448	0.87176					20	12	2	0	0	0	0.12545	1	39264	39264		3.5965	1.9439	1	990960			37161	16906	18456	18534	43228	43228					0.07761011062234502
VGTKKGSS	8	Unmodified	_VGTKKGSS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	763.4333984255791	1	763.430844	762.423567	2.2589	0.0017245	0.23172	0.0001769	2.4906	0.0019014	763.4308987749606	62.43	0.31159	62.43	62.242	62.554	0					14	9	2	0	0	0	0.89176	1	26018	26018		0.79363	0	1	774160	+		37162	10396	18457	18535	43229	43229					0.03285253800584087
VGTKKGSS	8	Unmodified	_VGTKKGSS_					0	0	0			REV__ENSG00000151150|ENST00000280772|ANK3	REV__ENSG00000151150|ENST00000280772|ANK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.2211791872978	2	382.21906	762.423567	2.6654	0.0010188	2.1626	0.00082658	4.8279	0.0018453	382.2197737959719	60.84	0.58482	62.805	62.482	63.067	1.9653					38	18	3	0	0	0	0.89176	1	25487	25487		0.79363	0	1	8025900	+		37163	10396	18457	18535	43230	43230					0.03285253800584087
VGTKPGRI	8	Unmodified	_VGTKPGRI_					0	0	0			REV__ENST00000396516.6_1_16:11855341-11855784:-|nuORF	REV__ENST00000396516.6_1_16:11855341-11855784:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	414.2606078982353	2	414.25852	826.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.431	1	17.471	16.971	17.971	1.0392								0	0	0	1.0178	1	6824	6824		0.79363	0	1		+		37164	12850	18458	18536	43231	43231					0.08229525825527162
VGTKSNPRV	9	Unmodified	_VGTKSNPRV_					0	0	0			REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2780334353447	2	479.277441	956.540328	2.7224	0.0013048	0.52914	0.0002536	3.2515	0.0015584	479.2777388362033	64.549	1.1454	64.878	64.658	65.803	0.32899					62	35	3	0	0	0	0.83213	1	27082	27082		2.0598	0	1	1127300	+		37165	10777	18459	18537	43232	43232					0.060319920203255606
VGTKSNPRV	9	Unmodified	_VGTKSNPRV_					0	0	0			REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	REV__ENST00000481908.5_1_X:134654863-134703297:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2804748415947	2	479.277441	956.540328	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.81	1	65.217	64.717	65.717	1.4071								0	0	0	0.42693	1	26763	26763		2.0598	0	1		+		37166	10777	18459	18537	43233	43233					0.060319920203255606
VGTLALLVP	9	Unmodified	_VGTLALLVP_					0	0	0			REV__SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	REV__SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	441.7886535525322	2	441.786579	881.558604	0.83434	0.0003686	2.8628	0.0012647	3.6971	0.0016333	441.78773654378494	27.846	0.50831	27.846	27.591	28.1	0					51	16	4	0	0	0	0.83213	1	11590	11590		2.0598	0	1	25154000	+		37167	11665	18460	18538	43234	43234					0.11308733942337312
VGTLALLVP	9	Unmodified	_VGTLALLVP_					0	0	0			REV__SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	REV__SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.7883483767509	2	441.786579	881.558604	1.5303	0.00067606	2.1817	0.00096384	3.712	0.0016399	441.7874449671007	25.558	0.36936	26.817	26.617	26.987	1.2594					30	11	4	0	0	0	0.83213	1	10682	10682		2.0598	0	1	12495000	+		37168	11665	18460	18538	43235	43235					0.11308733942337312
VGTLDADK	8	Unmodified	_VGTLDADK_					0	0	0		ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	ENSG00000228672|ENST00000434752|PROB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	410.2106201052666	2	409.71635	817.418148	-0.78921	-0.00032335	2.7663	0.0011334	1.9771	0.00081003	409.71758810895886	11.966	1.0484	11.966	11.605	12.654	0					42	33	2	0	0	0	2.3239	1	5085	5085		25.399	9.5521	1	624630			37169	5299	18461	18539	43236	43236					0.0021353021809318307
VGTLLAAAI	9	Unmodified	_VGTLLAAAI_					0	0	0			REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	828.5194579958916	1	828.518931	827.511654	1.8751	0.0015536	-0.00084611	-7.0101E-07	1.8743	0.0015529	828.5187383588948	53.7	0.21773	54.023	53.882	54.1	0.32283					10	6	2	0	0	0	0.09539	1	22488	22488		50.855	3.9342	1	553830	+		37170	15177	18462	18540	43237	43237					0.09099874391165486
VGTLLAAAI	9	Unmodified	_VGTLLAAAI_					0	0	0			REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	828.518931	827.511654	1.9336	0.001602	0.54831	0.00045428	2.4819	0.0020563	828.520031678115	54.168	0.19415	54.168	54.087	54.281	0	0.0725	0.00022752	NaN	50.855	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	627120	+		37171	15177	18462	18540							0.09099874391165486
VGTLLAAAI	9	Unmodified	_VGTLLAAAI_					0	0	0			REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	REV__tr|A0A553SRW1|A0A553SRW1_NIACITrimericintracellularcationchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01940PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	828.518931	827.511654	1.8751	0.0015536	-0.00084611	-7.0101E-07	1.8743	0.0015529	828.5187383588948	53.7	0.21773	54.023	53.882	54.1	0.32283	-0.0725	-0.00022746	NaN	50.855	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	553830	+		37172	15177	18462	18540							0.09099874391165486
VGTLLKETL	9	Unmodified	_VGTLLKETL_					0	0	0		tr|A0A7D7A2X5|A0A7D7A2X5_9CLOTSporeproteaseYyaCOS=ClostridiumintestinaleOX=36845GN=yyaCPE=4SV=1	tr|A0A7D7A2X5|A0A7D7A2X5_9CLOTSporeproteaseYyaCOS=ClostridiumintestinaleOX=36845GN=yyaCPE=4SV=1	tr|A0A7D7A2X5|A0A7D7A2X5_9CLOTSporeproteaseYyaCOS=ClostridiumintestinaleOX=36845GN=yyaCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.3018371462822	2	487.30005	972.585547	2.5172	0.0012266	-0.50822	-0.00024766	2.0089	0.00097895	487.29977107934457	42.847	0.43792	43.168	42.943	43.381	0.32058					40	14	4	0	0	0	0.11643	1	17943	17943		43.858	0	1	14480000			37173	17267	18463	18541	43238	43238					0.09815797762848888
VGTLNRPRG	9	Unmodified	_VGTLNRPRG_					0	0	0		nc|ENSG00000065361|P21860-4|ERBB3;ENSG00000065361|ENST00000267101|ERBB3;nc|ENSG00000065361|P21860-5|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2859680056572	2	485.283057	968.551562	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.075	1	22.2	21.7	22.7	1.1254								0	0	0	0.42693	1	8793	8793		2.0598	0.40713	1				37174	786	18464	18542	43239	43239					0.06602814114467037
VGTLTSLKV	9	Unmodified	_VGTLTSLKV_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	459.1725341677666	2	459.286943	916.559333	2.3597	0.0010838	-2.1756	-0.00099923	0.18409	8.4551E-05	459.28565245999124	83.343	0.37857	84.531	84.326	84.704	1.1879					21	11	2	0	0	0	0.11898	1	35045	35045		0.6015	0.6015	1	1757900	+		37175	11883	18465	18543	43240	43240					0.09771528591375045
VGTLTSLKV	9	Unmodified	_VGTLTSLKV_					0	0	0			REV__ENSG00000221944|ENST00000408957|TIGD1	REV__ENSG00000221944|ENST00000408957|TIGD1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	459.286943	916.559333	2.547	0.0011698	-3.2201	-0.001479	-0.67306	-0.00030913	459.28516465301004	84.343	0.69393	84.343	84.119	84.813	0	-0.13874	-0.00026856	NaN	0.6015	38	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3011100	+		37176	11883	18465	18543							0.09771528591375045
VGTMQWLLERE	11	Unmodified	_VGTMQWLLERE_					0	0	0		nc|ENSG00000173320|Q9P2F5-2|STOX2;ENSG00000173320|ENST00000308497|STOX2	nc|ENSG00000173320|Q9P2F5-2|STOX2	nc|ENSG00000173320|Q9P2F5-2|STOX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	454.5682556033134	3	454.567583	1360.68092	0.28954	0.00013162	0.9241	0.00042007	1.2136	0.00055168	454.5681051810406	11.639	0.09604	12.401	12.351	12.447	0.76165					4	2	2	0	0	0	0.95289	1	4841	4841		6.6235	0	1	1226200			37177	4278	18466	18544	43241	43241					0.015007828915713617
VGTNGGLK	8	Unmodified	_VGTNGGLK_					0	0	0		ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2	ENSG00000145934|ENST00000518659|TENM2	ENSG00000145934|ENST00000518659|TENM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	745.4202758669853	1	745.420279	744.413003	1.8726	0.0013959	-2.6631	-0.0019852	-0.79056	-0.0005893	745.4184576633899	63.683	0.3579	64.012	63.788	64.146	0.32899					20	11	2	0	0	0	0.89008	2	26639	26639;26690		2.5775	0	1	1833800			37178	3130	18467	18545	43242;43243	43242					0.030572711461331892
VGTNGGLK	8	Unmodified	_VGTNGGLK_					0	0	0		ENSG00000145934|ENST00000518659|TENM2;nc|ENSG00000145934|Q9NT68-2|TENM2	ENSG00000145934|ENST00000518659|TENM2	ENSG00000145934|ENST00000518659|TENM2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	745.420279	744.413003	2.1256	0.0015845	-1.6273	-0.001213	0.49834	0.00037147	745.4183586903849	63.817	0.39645	63.817	63.587	63.983	0	-0.097722	0.00051418	NaN	2.5775	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2706100			37179	3130	18467	18545							0.030572711461331892
VGTNPLIG	8	Unmodified	_VGTNPLIG_					0	0	0		tr|A0A553SR58|A0A553SR58_NIACIPurinenucleosidephosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_00440PE=3SV=1	tr|A0A553SR58|A0A553SR58_NIACIPurinenucleosidephosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_00440PE=3SV=1	tr|A0A553SR58|A0A553SR58_NIACIPurinenucleosidephosphorylaseOS=NialliacirculansOX=1397GN=CEQ21_00440PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1536743044853	2	385.723978	769.433404	0.093744	3.6159E-05	2.4457	0.00094335	2.5394	0.00097951	385.72559057875094	30.399	0.18552	31.682	31.626	31.811	1.2825					8	5	2	0	0	0	2.3239	1	12756	12756		0.79363	0	1	135330			37180	16543	18468	18546	43244	43244					0.03946441805965151
VGTPFLVPRRP	11	Unmodified	_VGTPFLVPRRP_					0	0	0			REV__ENST00000508110.5_1_4:187347442-187347706:-|nuORF	REV__ENST00000508110.5_1_4:187347442-187347706:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	311.1341735720634	4	310.439658	1237.72953	0.10733	3.3318E-05	0.74797	0.0002322	0.8553	0.00026552	310.4399767647511	24.984	0.29984	26.243	26.046	26.346	1.2594					12	9	2	0	0	0	0.14606	1	10445	10445		0.50596	0	1	383770	+		37181	13551	18469	18547	43245	43245					0.1201706431365892
VGTPKPVK	8	Unmodified	_VGTPKPVK_					0	0	0			REV__CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	REV__CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2386962771416	2	413.263271	824.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.739	1	45.683	45.183	46.183	1.9438								0	0	0	1.0178	1	18341	18341		0.79363	0	1		+		37182	8193	18470	18548	43246	43246					0.09271294111044881
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3083984255791	1	631.304581	630.297304	2.251	0.001421	4.1477	0.0026185	6.3986	0.0040395	631.3068015297341	64.194	0.3501	64.194	63.983	64.333	0					15	10	2	0	0	0	0.89176	2	26732	26732;26780		0.79363	0	1	692180	+		37183	12291	18471	18549	43247;43248	43247					-0.03263252704698516
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.3081542849541	1	631.304581	630.297304	2.1167	0.0013363	4.1716	0.0026336	6.2883	0.0039699	631.3071789008193	65.3	0.40973	65.3	65.104	65.513	0					16	12	2	0	0	0	0.89176	1	27252	27252		0.79363	0	1	414670	+		37184	12291	18471	18549	43249	43249					-0.03263252704698516
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.3099853396416	1	631.304581	630.297304	1.8054	0.0011397	3.403	0.0021483	5.2084	0.0032881	631.3066833536333	63.649	0.45197	63.978	63.725	64.177	0.32899					18	14	2	0	0	0	0.89176	2	26629	26629;26707		0.79363	0	1	1199300	+		37185	12291	18471	18549	43250;43251	43250					-0.03263252704698516
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	631.304581	630.297304	2.1167	0.0013363	4.1716	0.0026336	6.2883	0.0039699	631.3071789008193	65.3	0.40973	65.3	65.104	65.513	0	0.1027	-0.00013822	NaN	0.79363	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	414670	+		37186	12291	18471	18549							-0.03263252704698516
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	631.304581	630.297304	1.8206	0.0011493	4.9088	0.003099	6.7294	0.0042483	631.3075278654984	64.884	0.37608	65.21	64.947	65.323	0.32689	0.012717	0.00032718	NaN	0.79363	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729350	+		37187	12291	18471	18549							-0.03263252704698516
VGTPSGGG	8	Unmodified	_VGTPSGGG_					0	0	0			REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	REV__ENST00000296127.7_1_3:45000934-45017625:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	631.304581	630.297304	1.9156	0.0012094	3.3399	0.0021085	5.2555	0.0033179	631.3067308591469	63.675	0.36796	65.082	64.839	65.207	1.4071	-0.11542	-0.00066327	NaN	0.79363	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	532330	+		37188	12291	18471	18549							-0.03263252704698516
VGTSPCSH	8	Unmodified	_VGTSPCSH_					0	0	0		ENST00000458578.6_1_22:21976769-21977039:+|nuORF	ENST00000458578.6_1_22:21976769-21977039:+|nuORF	ENST00000458578.6_1_22:21976769-21977039:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.1751891970634	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.024	1	21.083	20.583	21.583	1.0585								0	0	0	1.0178	1	8337	8337		2.8892	0	1				37189	6658	18472	18550	43252	43252					-0.0686753851936146
VGTSPCSH	8	Unmodified	_VGTSPCSH_					0	0	0		ENST00000458578.6_1_22:21976769-21977039:+|nuORF	ENST00000458578.6_1_22:21976769-21977039:+|nuORF	ENST00000458578.6_1_22:21976769-21977039:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	394.1746703982353	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.32	1	21.446	20.946	21.946	1.1254								0	0	0	1.0178	1	8466	8466		2.8892	0	1				37190	6658	18472	18550	43253	43253					-0.0686753851936146
VGTTATIG	8	Unmodified	_VGTTATIG_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2012817263603	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4564	1	1.6035	1.1035	2.1035	0.14703								0	0	0	1.0178	1	600	600		0.79363	0	1		+		37191	11818	18473	18551	43254	43254					0.01566162534970772
VGTTATIG	8	Unmodified	_VGTTATIG_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2008239626884	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5654	1	4.6534	4.1534	5.1534	0.08803								0	0	0	1.0178	1	1887	1887		0.79363	0	1		+		37192	11818	18473	18551	43255	43255					0.01566162534970772
VGTTATIG	8	Unmodified	_VGTTATIG_					0	0	0			REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	REV__nc|ENSG00000205592|Q7Z5P9-2|MUC19	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2011901736259	2	360.200336	718.386119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.10335	1	0.83914	0.33914	1.3391	0.73579								0	0	0	1.0178	1	41	41		0.79363	0	1		+		37193	11818	18473	18551	43256	43256					0.01566162534970772
VGTTSTKM	8	Unmodified	_VGTTSTKM_					0	0	0			REV__tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	REV__tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7128478884697	2	412.712753	823.410954	1.0517	0.00043406	0.94311	0.00038923	1.9948	0.00082329	412.71307610756196	57.192	0.40268	58.607	58.338	58.74	1.4145					29	13	3	0	0	0	0.87431	2	23913	23913;23960		12.532	0.89125	1	8493200	+		37194	15200	18474	18552	43257;43258	43257					-0.007815256539743132
VGTTSTKM	8	Unmodified	_VGTTSTKM_					0	0	0			REV__tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	REV__tr|A0A553SSA3|A0A553SSA3_NIACIFlavodoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_02530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.7131225466728	2	412.712753	823.410954	0.84916	0.00035046	1.4798	0.00061075	2.329	0.00096121	412.7132555151679	56.609	0.38654	58.578	58.364	58.751	1.9684					30	12	3	0	0	0	0.87431	1	23703	23703		12.532	0.89125	1	10633000	+		37195	15200	18474	18552	43259	43259					-0.007815256539743132
VGTTVAILLEK	11	Unmodified	_VGTTVAILLEK_					0	0	0			REV__tr|A0A553SRR6|A0A553SRR6_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_01470PE=4SV=1	REV__tr|A0A553SRR6|A0A553SRR6_NIACIGeneralstressproteinOS=NialliacirculansOX=1397GN=CEQ21_01470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	572.3542968630791	2	572.352814	1142.69108	1.6222	0.00092846	1.3748	0.00078684	2.9969	0.0017153	572.3535552668794	41.353	0.26677	41.67	41.527	41.794	0.31683					14	9	2	0	0	0	0.66268	1	17355	17355		19.362	4.9566	1	420060	+		37196	15171	18475	18553	43260	43260					0.12543713888476304
VGTVASFTV	9	Unmodified	_VGTVASFTV_					0	0	0			REV__tr|A0A7D6VTM8|A0A7D6VTM8_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09770PE=3SV=1	REV__tr|A0A7D6VTM8|A0A7D6VTM8_9CLOTL-lactatepermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09770PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	880.4794799685478	1	880.47746	879.470183	1.1458	0.0010089	1.1061	0.00097391	2.252	0.0019828	880.4780819298059	70.595	0.27167	72.433	72.319	72.591	1.8378					15	8	2	0	0	0	0.09539	1	29610	29610		50.855	4.8341	1	1970100	+		37197	15493	18476	18554	43261	43261					0.02562693631853108
VGTVIPSG	8	Unmodified	_VGTVIPSG_					0	0	0			REV__ENST00000560168.1_1_19:46268761-46269535:-|nuORF	REV__ENST00000560168.1_1_19:46268761-46269535:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	365.2120544314384	2	365.210704	728.406855	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.104	1	27.365	26.865	27.865	0.26173								0	0	0	1.0178	1	11332	11332		2.5775	0	1		+		37198	11202	18477	18555	43262	43262					0.031787529146299676
VGTVLHIL	8	Unmodified	_VGTVLHIL_					0	0	0			REV__CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	REV__CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	851.5405151247978	1	851.534915	850.527639	2.9614	0.0025217	0.95708	0.00081499	3.9185	0.0033367	851.5356503638909	109.35	0.27652	109.51	109.35	109.63	0.15898					20	12	2	0	0	0	0.89176	1	47508	47508		0.79363	0	1	45779000	+		37199	8196	18478	18556	43263	43263					0.09639580628106614
VGTVLHIL	8	Unmodified	_VGTVLHIL_					0	0	0			REV__CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	REV__CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	851.5414916872978	1	851.534915	850.527639	3.0664	0.0026112	1.8984	0.0016166	4.9648	0.0042277	851.5363132483378	109.32	0.23715	109.48	109.34	109.58	0.1548					20	10	2	0	0	0	0.89176	1	47413	47413		0.79363	0	1	34657000	+		37200	8196	18478	18556	43264	43264					0.09639580628106614
VGTVNIPI	8	Unmodified	_VGTVNIPI_					0	0	0			REV__nc|ENSG00000188158|Q6T4R5-4|NHS	REV__nc|ENSG00000188158|Q6T4R5-4|NHS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	812.4869262576103	1	812.48763	811.480354	1.8079	0.0014689	-3.1866	-0.002589	-1.3787	-0.0011202	812.4846407305049	78.49	0.34715	78.49	78.314	78.662	0					18	10	2	0	0	0	0.88958	1	32655	32655		2.8892	0	1	927130	+		37201	11562	18479	18557	43265	43265					0.06707301357084816
VGTVNIPI	8	Unmodified	_VGTVNIPI_					0	0	0			REV__nc|ENSG00000188158|Q6T4R5-4|NHS	REV__nc|ENSG00000188158|Q6T4R5-4|NHS	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	812.48763	811.480354	1.8079	0.0014689	-3.1866	-0.002589	-1.3787	-0.0011202	812.4846407305049	78.49	0.34715	78.49	78.314	78.662	0	-0.047434	-0.00027839	NaN	2.8892	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	927130	+		37202	11562	18479	18557							0.06707301357084816
VGTVQVTL	8	Unmodified	_VGTVQVTL_					0	0	0		ENSG00000005238|ENST00000322813|ATOSB;nc|ENSG00000005238|Q7L5A3-2|ATOSB;nc|ENSG00000005238|Q7L5A3-3|ATOSB	ENSG00000005238|ENST00000322813|ATOSB	ENSG00000005238|ENST00000322813|ATOSB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.7463561892509	2	408.744911	815.475269	1.5533	0.0006349	3.1951	0.001306	4.7484	0.0019409	408.74602519738517	39.435	0.42904	41.272	41.129	41.558	1.8366					19	13	2	0	0	0	0.89176	2	16530	16530;16579		0.79363	0	1	597630			37203	485	18480	18558	43266;43267	43266					0.06014997494492036
VGTVVGID	8	Unmodified	_VGTVVGID_					0	0	0		ENSG00000044574|ENST00000324460|HSPA5	ENSG00000044574|ENST00000324460|HSPA5	ENSG00000044574|ENST00000324460|HSPA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2179138064384	2	380.215986	758.417419	0.4019	0.00015281	2.3971	0.00091143	2.799	0.0010642	380.2166902714722	26.274	0.48514	28.021	27.733	28.218	1.747					37	15	3	0	0	0	0.89008	1	10892	10892		2.5775	0	1	9115100			37204	672	18481	18559	43268	43268					0.02854735569053446
VGTVVGLH	8	Unmodified	_VGTVVGLH_					0	0	0			REV__nc|ENSG00000105609|O75023-2|LILRB5	REV__nc|ENSG00000105609|O75023-2|LILRB5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2844421267509	2	391.231971	780.449388	-0.85044	-0.00033272	1.9021	0.00074414	1.0516	0.00041142	391.23267594152543	22.416	0.45004	22.416	22.214	22.664	0					23	14	2	0	0	0	2.3239	1	9419	9419		2.8892	0	1	1489100	+		37205	9183	18482	18560	43269	43269					0.05038148042865487
VGTVVSTI	8	Unmodified	_VGTVVSTI_					0	0	0		ENSG00000152315|ENST00000282146|KCNK13;ENSG00000184261|ENST00000327876|KCNK12	ENSG00000152315|ENST00000282146|KCNK13	ENSG00000152315|ENST00000282146|KCNK13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	388.2325012087822	2	388.231636	774.448719	-1.3133	-0.00050988	2.6699	0.0010365	1.3565	0.00052665	388.232669643559	13.963	0.55425	13.963	13.732	14.286	0					37	17	3	0	0	0	0.89008	1	5774	5774		2.5775	0	1	6801500			37206	3321	18483	18561	43270	43270					0.05247308603156853
VGTVVSTI	8	Unmodified	_VGTVVSTI_					0	0	0		ENSG00000152315|ENST00000282146|KCNK13;ENSG00000184261|ENST00000327876|KCNK12	ENSG00000152315|ENST00000282146|KCNK13	ENSG00000152315|ENST00000282146|KCNK13	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1274902224541	2	388.231636	774.448719	0.23745	9.2186E-05	0.50876	0.00019752	0.74621	0.0002897	388.2320383658484	13.829	0.56147	13.929	13.685	14.246	0.09944					28	17	2	0	0	0	2.3239	1	5724	5724		0.79363	0	1	766390			37207	3321	18483	18561	43271	43271					0.05247308603156853
VGVAARCG	8	Unmodified	_VGVAARCG_					0	0	0		ENST00000487350.5_1_1:155145426-155145600:-|nuORF	ENST00000487350.5_1_1:155145426-155145600:-|nuORF	ENST00000487350.5_1_1:155145426-155145600:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	732.3820068240166	1	732.38212	731.374843	2.7146	0.0019881	-1.4044	-0.0010286	1.3102	0.00095956	732.3803783582962	99.906	0.15514	99.978	99.869	100.02	0.072716					8	4	3	0	0	0	0.88504	1	41843	41843		5.7604	0	1	1379000			37208	6878	18484	18562	43272	43272					-0.0015893804018105584
VGVAARCG	8	Unmodified	_VGVAARCG_					0	0	0		ENST00000487350.5_1_1:155145426-155145600:-|nuORF	ENST00000487350.5_1_1:155145426-155145600:-|nuORF	ENST00000487350.5_1_1:155145426-155145600:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	732.38212	731.374843	1.3807	0.0010112	-6.2238	-0.0045582	-4.8431	-0.003547	732.3777301334809	99.93	0.092972	99.93	99.883	99.976	0	-0.024025	-0.0015697	NaN	5.7604	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1326300			37209	6878	18484	18562							-0.0015893804018105584
VGVAATIL	8	Unmodified	_VGVAATIL_					0	0	0			REV__ENSG00000104154|ENST00000261867|SLC30A4	REV__ENSG00000104154|ENST00000261867|SLC30A4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	743.4689208865166	1	743.466167	742.45889	2.4692	0.0018357	1.2063	0.00089684	3.6755	0.0027326	743.4664016392782	104.6	0.091019	104.76	104.71	104.81	0.16055					10	4	3	0	0	0	0.89008	1	44367	44367		2.5775	0	1	20659000	+		37210	9127	18485	18563	43273	43273					0.07735916328385883
VGVAATIL	8	Unmodified	_VGVAATIL_					0	0	0			REV__ENSG00000104154|ENST00000261867|SLC30A4	REV__ENSG00000104154|ENST00000261867|SLC30A4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	743.466167	742.45889	2.4692	0.0018357	1.2063	0.00089684	3.6755	0.0027326	743.4664016392782	104.6	0.091019	104.76	104.71	104.81	0.16055	0.0082009	0.0010942	NaN	2.5775	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20659000	+		37211	9127	18485	18563							0.07735916328385883
VGVAATIL	8	Unmodified	_VGVAATIL_					0	0	0			REV__ENSG00000104154|ENST00000261867|SLC30A4	REV__ENSG00000104154|ENST00000261867|SLC30A4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	743.466167	742.45889	2.6979	0.0020058	-2.7893	-0.0020738	-0.091461	-6.7998E-05	743.466541892303	104.57	0.098694	104.75	104.67	104.77	0.1731	-0.0082009	-0.0018764	NaN	2.5775	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12703000	+		37212	9127	18485	18563							0.07735916328385883
VGVAELTD	8	Unmodified	_VGVAELTD_					0	0	0			REV__sp|P09722|US22_HCMVAEarlynuclearproteinHWLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=US22PE=3SV=2	REV__sp|P09722|US22_HCMVAEarlynuclearproteinHWLF1OS=Humancytomegalovirus(strainAD169)OX=10360GN=US22PE=3SV=2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1803466677666	2	402.210901	802.407249	0.40807	0.00016413	-0.99142	-0.00039876	-0.58336	-0.00023463	402.2101402988633	23.015	0.3716	24.666	24.436	24.808	1.6511					15	11	2	0	0	0	2.3239	1	9523	9523		0	0	1	453130	+		37213	14641	18486	18564	43274	43274					-0.001858721562143728
VGVAGGTTALR	11	Unmodified	_VGVAGGTTALR_					0	0	0		ENST00000328089.10_1_1:9427712-9428249:+|nuORF	ENST00000328089.10_1_1:9427712-9428249:+|nuORF	ENST00000328089.10_1_1:9427712-9428249:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2912780642509	2	501.290548	1000.56654	1.6159	0.00081002	0.54537	0.00027339	2.1613	0.0010834	501.2905682671978	67.241	1.5614	67.241	66.577	68.139	0					98	49	3	0	0	0	1.0084	1	28262	28262		3.2813	0.97858	1	1969600			37214	5878	18487	18565	43275	43275					0.06628261191781348
VGVAGKNG	8	Unmodified	_VGVAGKNG_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	701.3939086794853	1	701.394064	700.386788	2.2447	0.0015744	-2.186	-0.0015332	0.058714	4.1182E-05	701.39258158399	59.871	0.41277	60.199	60.029	60.442	0.32809					24	13	2	0	0	0	0.88958	1	25131	25131		2.8892	0	1	1714200	+		37215	10779	18488	18566	43276	43276					0.02461001974654664
VGVAGKNG	8	Unmodified	_VGVAGKNG_					0	0	0			REV__nc|ENSG00000165458|O15357-2|INPPL1	REV__nc|ENSG00000165458|O15357-2|INPPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	701.3914062380791	1	701.394064	700.386788	1.1027	0.0007734	-3.156	-0.0022136	-2.0533	-0.0014402	701.3919624592178	58.56	0.35401	60.529	60.279	60.633	1.969					15	11	2	0	0	0	0.88958	1	24551	24551		2.8892	0	1	2118900	+		37216	10779	18488	18566	43277	43277					0.02461001974654664
VGVAKAAP	8	Unmodified	_VGVAKAAP_					0	0	0			REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	712.4333984255791	1	712.435201	711.427924	2.1307	0.001518	-3.1173	-0.0022209	-0.98659	-0.00070288	712.4326290538783	56.195	0.76307	56.516	56.139	56.902	0.32103					42	26	2	0	0	0	0.89176	4	23479	23479;23543;23635;23688		0.79363	0	1	1350600	+		37217	12553	18489	18567	43278;43279;43280;43281	43278					0.06066763014121079
VGVAKAAP	8	Unmodified	_VGVAKAAP_					0	0	0			REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	712.435201	711.427924	2.0481	0.0014591	-3.6679	-0.0026132	-1.6199	-0.0011541	712.4323425996496	56.403	0.84015	56.403	55.97	56.81	0	-0.056836	-0.00017693	NaN	0.79363	39	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1204000	+		37218	12553	18489	18567							0.06066763014121079
VGVAKAAP	8	Unmodified	_VGVAKAAP_					0	0	0			REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	REV__ENST00000356892.3_1_X:128927809-128927905:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	712.435201	711.427924	2.1307	0.001518	-3.1173	-0.0022209	-0.98659	-0.00070288	712.4326290538783	56.195	0.76307	56.516	56.139	56.902	0.32103	0.056836	0.00021535	NaN	0.79363	42	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1350600	+		37219	12553	18489	18567							0.06066763014121079
VGVAKKLL	8	Unmodified	_VGVAKKLL_					0	0	0		ENST00000520118.5_1_17:78397327-78397498:+|nuORF;ENST00000521330.6_1_17:78388994-78402256:+|nuORF;nc|ENSG00000173818|Q8N8Q3-2|ENDOV;nc|ENSG00000173818|Q8N8Q3-3|ENDOV;ENSG00000173818|ENST00000518137|ENDOV;nc|ENSG00000173818|Q8N8Q3-6|ENDOV;nc|ENSG00000173818|Q8N8Q3-7|ENDOV	ENST00000520118.5_1_17:78397327-78397498:+|nuORF	ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	414.2895690798759	2	414.289288	826.564024	1.7017	0.00070498	2.4963	0.0010342	4.198	0.0017392	414.2909968631669	49.004	1.1828	50.981	50.7	51.883	1.9772					63	37	2	0	0	0	2.3239	1	20411	20411		20.871	1.4322	1	2717100			37220	4301	18490	18568	43282	43282					0.1438045752480548
VGVAKKLL	8	Unmodified	_VGVAKKLL_					0	0	0		ENST00000520118.5_1_17:78397327-78397498:+|nuORF;ENST00000521330.6_1_17:78388994-78402256:+|nuORF;nc|ENSG00000173818|Q8N8Q3-2|ENDOV;nc|ENSG00000173818|Q8N8Q3-3|ENDOV;ENSG00000173818|ENST00000518137|ENDOV;nc|ENSG00000173818|Q8N8Q3-6|ENDOV;nc|ENSG00000173818|Q8N8Q3-7|ENDOV	ENST00000520118.5_1_17:78397327-78397498:+|nuORF	ENST00000520118.5_1_17:78397327-78397498:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	414.289288	826.564024	1.6866	0.00069873	1.5087	0.00062505	3.1953	0.0013238	414.2896354899513	49.306	0.37172	50.697	50.516	50.888	1.3911	-0.14222	-0.00055511	NaN	42.968	22	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1966000			37221	4301	18490	18568							0.1438045752480548
VGVALQLK	8	Unmodified	_VGVALQLK_					0	0	0			REV__ENST00000238508.7_1_18:61602315-61602360:+|nuORF	REV__ENST00000238508.7_1_18:61602315-61602360:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	414.2694885134697	2	414.271096	826.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.66	1	14.488	13.988	14.988	0.82789								0	0	0	1.0178	1	5664	5664		0.79363	0	1		+		37222	12117	18491	18569	43283	43283					0.10743580628070504
VGVAPAPL	8	Unmodified	_VGVAPAPL_					0	0	0		nc|ENSG00000112787|Q9HCM7|FBRSL1	nc|ENSG00000112787|Q9HCM7|FBRSL1	nc|ENSG00000112787|Q9HCM7|FBRSL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2227966189384	2	362.223614	722.432676	-0.62538	-0.00022653	-1.3734	-0.00049746	-1.9987	-0.00072399	362.22306996850074	63.817	1.2603	63.817	63.492	64.753	0					87	39	4	0	0	0	0.89176	3	26531	26531;26620;26672		0.79363	0	1	250650000			37223	7854	18492	18570	43284;43285;43286	43284					0.060356471568866255
VGVAPMTRI	9	Unmodified	_VGVAPMTRI_					0	0	0		tr|A0A553SNE4|A0A553SNE4_NIACINADH:flavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24250PE=4SV=1	tr|A0A553SNE4|A0A553SNE4_NIACINADH:flavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24250PE=4SV=1	tr|A0A553SNE4|A0A553SNE4_NIACINADH:flavinoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_24250PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2754089236259	2	472.273312	942.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.632	1	72.973	72.473	73.473	1.3415								0	0	0	0.42693	1	30064	30064		2.3027	0	1				37224	16416	18493	18571	43287	43287					0.05850721779336254
VGVAQRRG	8	Unmodified	_VGVAQRRG_					0	0	0			REV__ENSG00000282936|ENST00000634965|unknown	REV__ENSG00000282936|ENST00000634965|unknown	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7527648806572	2	421.751393	841.488233	2.9295	0.0012355	0.2926	0.0001234	3.2221	0.0013589	421.7514556497293	70.791	0.55908	72.145	71.873	72.432	1.3536					41	17	4	0	0	0	0.89176	1	29673	29673		0.79363	0	1	9287600	+		37225	12030	18494	18572	43288	43288					0.061148733972345326
VGVATVFA	8	Unmodified	_VGVATVFA_					0	0	0		CLCNKB|p.S636Vfs*8|1|0.47|ENSG00000184908|chr1:16055733-16055734|-/A|frameshift_variant;nc|ENSG00000186510|P51800-2|CLCNKA;nc|ENSG00000186510|P51800-3|CLCNKA;ENSG00000186510|ENST00000331433|CLCNKA;ENSG00000184908|ENST00000375679|CLCNKB	CLCNKB|p.S636Vfs*8|1|0.47|ENSG00000184908|chr1:16055733-16055734|-/A|frameshift_variant	CLCNKB|p.S636Vfs*8|1|0.47|ENSG00000184908|chr1:16055733-16055734|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.2211181521416	2	382.221072	762.42759	2.6654	0.0010188	-3.0998	-0.0011848	-0.43442	-0.00016604	382.2197737959719	60.84	0.58482	62.805	62.482	63.067	1.9653					38	18	3	0	0	0	0.88958	1	25590	25590		2.8892	0	1	8025900			37226	312	18495	18573	43289	43289					0.0368734329426843
VGVAVPVLP	9	Unmodified	_VGVAVPVLP_					0	0	0			REV__ENST00000467418.1_1_6:170058029-170062491:-|nuORF	REV__ENST00000467418.1_1_6:170058029-170062491:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	425.7754394412041	2	425.773471	849.53239	1.2125	0.00051625	3.6528	0.0015553	4.8653	0.0020715	425.7753116565973	25.591	0.66942	25.843	25.645	26.314	0.25197					70	21	5	0	0	0	0.82604	1	10766	10766		2.3027	0	1	135690000	+		37227	13245	18496	18574	43290	43290					0.10160464770854105
VGVAVTME	8	Unmodified	_VGVAVTME_					0	0	0		ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	ENSG00000079999|ENST00000171111|KEAP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	403.7403442263603	2	403.209847	804.40514	1.6891	0.00068107	-1.1216	-0.00045223	0.56755	0.00022884	403.2090905610691	66.044	0.45215	67.443	67.184	67.636	1.3989					25	14	2	0	0	0	2.3239	1	27658	27658		0.79363	0	1	3725600			37228	997	18497	18575	43291	43291					-0.004886241656436141
VGVCGGDS	8	Unmodified	_VGVCGGDS_					0	0	0			REV__ENST00000366928.9_1_1:219347210-219347294:+|nuORF	REV__ENST00000366928.9_1_1:219347210-219347294:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	693.6193725466728	1	693.287216	692.27994	1.72	0.0011925	-0.13068	-9.0602E-05	1.5894	0.0011019	693.2874032294316	67.194	0.40981	67.516	67.366	67.775	0.32269					20	13	2	0	0	0	2.3239	1	28104	28104		2.8892	0	1	504590	+		37229	12616	18498	18576	43292	43292					-0.07850916302027144
VGVCVLRPT	9	Unmodified	_VGVCVLRPT_					0	0	0			REV__ENST00000504102.5_1_17:47755419-47755581:-|nuORF	REV__ENST00000504102.5_1_17:47755419-47755581:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2761108279228	2	472.273312	942.532072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.354	1	82.07	81.57	82.57	1.7167								0	0	0	0.42693	1	33708	33708		2.3027	0.65011	1		+		37230	13522	18499	18577	43293	43293					0.05850721779336254
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	798.4682494997978	1	798.47198	797.464704	1.7236	0.0013763	-3.9589	-0.003161	-2.2352	-0.0017848	798.4684527930683	67.742	0.44196	67.742	67.441	67.883	0					21	13	2	0	0	0	0.89176	2	28198	28198;28248		0.79363	0	1	749610	+		37231	14993	18500	18578	43294;43295	43294					0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	798.4716674685478	1	798.47198	797.464704	1.7278	0.0013796	-3.0656	-0.0024478	-1.3379	-0.0010683	798.4690656933785	67.546	0.43822	67.869	67.619	68.057	0.32269					21	13	2	0	0	0	0.89176	2	28232	28232;28296		0.79363	0	1	678820	+		37232	14993	18500	18578	43296;43297	43296					0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	798.4698364138603	1	798.47198	797.464704	1.4489	0.0011569	-1.9306	-0.0015416	-0.48169	-0.00038461	798.469934697058	67.583	0.36416	68.961	68.789	69.153	1.3778					15	11	2	0	0	0	0.89176	2	28334	28334;28389		0.79363	0	1	1651100	+		37233	14993	18500	18578	43298;43299	43298					0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	798.47198	797.464704	1.6797	0.0013412	-4.2512	-0.0033945	-2.5715	-0.0020533	798.4680934520809	68.656	0.40851	68.656	68.453	68.862	0	-0.25512	-0.00067524	NaN	0.79363	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2497300	+		37234	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	798.47198	797.464704	1.7236	0.0013763	-3.9589	-0.003161	-2.2352	-0.0017848	798.4684527930683	67.742	0.44196	67.742	67.441	67.883	0	-0.09792	-0.00073964	NaN	0.79363	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749610	+		37235	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	798.47198	797.464704	1.5407	0.0012302	-3.2701	-0.0026111	-1.7295	-0.0013809	798.4692364363448	68.568	0.40337	68.891	68.627	69.031	0.32224	-0.020388	0.00010813	NaN	0.79363	27	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2787400	+		37236	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	798.47198	797.464704	1.7278	0.0013796	-3.0656	-0.0024478	-1.3379	-0.0010683	798.4690656933785	67.546	0.43822	67.869	67.619	68.057	0.32269	0.028846	-2.6435E-05	NaN	0.79363	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678820	+		37237	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	798.47198	797.464704	1.4489	0.0011569	-1.9306	-0.0015416	-0.48169	-0.00038461	798.469934697058	67.583	0.36416	68.961	68.789	69.153	1.3778	0.050059	0.0011777	NaN	0.79363	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1651100	+		37238	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	798.47198	797.464704	1.4774	0.0011796	-2.6147	-0.0020878	-1.1374	-0.00090814	798.470111671888	66.52	0.36853	67.909	67.689	68.057	1.3887	0.069074	0.00033362	NaN	0.79363	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	499900	+		37239	14993	18500	18578							0.057870148400297694
VGVDAKPL	8	Unmodified	_VGVDAKPL_					0	0	0			REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	REV__tr|A0A553SLQ1|A0A553SLQ1_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21030PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	798.47198	797.464704	0.84087	0.00067141	-2.9977	-0.0023936	-2.1568	-0.0017222	798.4699102157325	67.248	0.39552	69.137	68.892	69.287	1.8889	0.22545	0.00032569	NaN	0.79363	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1809300	+		37240	14993	18500	18578							0.057870148400297694
VGVDFALKV	9	Unmodified	_VGVDFALKV_					0	0	0		ENSG00000117280|ENST00000367139|RAB29	ENSG00000117280|ENST00000367139|RAB29	ENSG00000117280|ENST00000367139|RAB29	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	474.2832519412041	2	474.28166	946.548768	1.0066	0.0004774	-1.0485	-0.00049727	-0.041894	-1.987E-05	474.2812258477427	55.638	0.49917	57.048	56.822	57.321	1.4099					44	25	3	0	0	0	0.0080158	2	23286	23286;23329		110.67	64.654	1	13110000			37241	2002	18501	18579	43300;43301	43300					0.07335545936939525
VGVDFALKV	9	Unmodified	_VGVDFALKV_					0	0	0		ENSG00000117280|ENST00000367139|RAB29	ENSG00000117280|ENST00000367139|RAB29	ENSG00000117280|ENST00000367139|RAB29	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	474.2817565798759	2	474.28166	946.548768	0.43848	0.00020796	0.46705	0.00022151	0.90553	0.00042948	474.2817665101781	55.126	0.37484	57.094	56.9	57.275	1.9684					32	16	3	0	0	0	0.026734	2	23134	23091;23134		92.653	52.205	1	10497000			37242	2002	18501	18579	43302;43303	43303					0.07335545936939525
VGVEPIWVT	9	Unmodified	_VGVEPIWVT_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2795898318291	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.341	1	33.619	33.119	34.119	1.2782								0	0	0	0.42693	1	13567	13567		2.0598	0	1		+		37243	9117	18502	18580	43304	43304					0.04435242074339385
VGVEPIWVT	9	Unmodified	_VGVEPIWVT_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2799865603447	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.456	1	33.734	33.234	34.234	1.2782								0	0	0	0.42693	1	13613	13613		2.0598	0	1		+		37244	9117	18502	18580	43305	43305					0.04435242074339385
VGVEPIWVT	9	Unmodified	_VGVEPIWVT_					0	0	0			REV__ENSG00000103657|ENST00000443617|HERC1	REV__ENSG00000103657|ENST00000443617|HERC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2787963747978	2	500.279118	998.543683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.584	1	33.862	33.362	34.362	1.2782								0	0	0	0.42693	1	13666	13666		2.0598	0	1		+		37245	9117	18502	18580	43306	43306					0.04435242074339385
VGVFLLMVL	9	Unmodified	_VGVFLLMVL_					0	0	0			REV__tr|A0A7D6VTH2|A0A7D6VTH2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17110PE=3SV=1	REV__tr|A0A7D6VTH2|A0A7D6VTH2_9CLOTEamAfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_17110PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.8079711794853	2	495.806457	989.598361	3.0503	0.0015124	0.032628	1.6177E-05	3.083	0.0015286	495.8060785653899	72.533	0.58456	73.863	73.672	74.257	1.3297					36	18	3	0	0	0	0.75267	1	30469	30469		5.2307	2.3415	1	1283700	+		37246	15488	18503	18581	43307	43307					0.10314537621411546
VGVFLRGF	8	Unmodified	_VGVFLRGF_					0	0	0		ENSG00000279012|ENST00000624187|OR51B2	ENSG00000279012|ENST00000624187|OR51B2	ENSG00000279012|ENST00000624187|OR51B2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	449.2677490115166	2	447.763438	893.512323	2.735	0.0012246	1.7805	0.00079726	4.5155	0.0020219	447.76408717519513	73.217	1.0513	73.541	72.797	73.849	0.32494					76	33	4	0	0	0	0.89176	1	30411	30411		0.79363	0	1	26597000			37247	5479	18504	18582	43308	43308					0.061307138309075526
VGVFMELF	8	Unmodified	_VGVFMELF_					0	0	0			REV__ENSG00000141385|ENST00000269143|AFG3L2	REV__ENSG00000141385|ENST00000269143|AFG3L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	471.2444640994072	2	471.243689	940.472826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.497	1	58.497	57.997	58.997	0								0	0	0	1.0178	1	24400	24400		0.79363	0	1		+		37248	10143	18505	18583	43309	43309					0.00020825765170684463
VGVFSRDRAD	10	Unmodified	_VGVFSRDRAD_					0	0	0			REV__ENST00000556875.5_1_12:57178730-57179726:+|nuORF	REV__ENST00000556875.5_1_12:57178730-57179726:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2889892458916	2	561.288537	1120.56252	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.842	1	32.124	31.624	32.624	1.2825								0	0	0	0.66166	1	12943	12943		1.6526	0.96225	1		+		37249	13873	18506	18584	43310	43310					0.007061716981070276
VGVGALVIV	9	Unmodified	_VGVGALVIV_					0	0	0			REV__nc|ENSG00000153029|Q95460-2|MR1	REV__nc|ENSG00000153029|Q95460-2|MR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	826.5411865115166	1	826.539666	825.53239	2.3616	0.001952	-0.29622	-0.00024484	2.0654	0.0017071	826.5397878760452	79.965	0.46371	81.216	80.987	81.45	1.2512					28	14	3	0	0	0	0.11074	2	33568	33568;33619		45.75	0	1	4781900	+		37250	10439	18507	18585	43311;43312	43311					0.11264464770840732
VGVGASTS	8	Unmodified	_VGVGASTS_					0	0	0			REV__nc|ENSG00000185008|Q9HCK4-2|ROBO2	REV__nc|ENSG00000185008|Q9HCK4-2|ROBO2	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1769897341728	2	339.176861	676.339169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.133	1	20.133	19.633	20.633	0								0	0	0	1.0178	1	8368	8368		0.79363	0	1		+		37251	11440	18508	18586	43313	43313					-0.011946970161829995
VGVGASTS	8	Unmodified	_VGVGASTS_					0	0	0			REV__nc|ENSG00000185008|Q9HCK4-2|ROBO2	REV__nc|ENSG00000185008|Q9HCK4-2|ROBO2	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1777526736259	2	339.176861	676.339169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.326	1	20.326	19.826	20.826	0								0	0	0	1.0178	1	8450	8450		0.79363	0	1		+		37252	11440	18508	18586	43314	43314					-0.011946970161829995
VGVGGGAG	8	Unmodified	_VGVGGGAG_					0	0	0			REV__ENSG00000167670|ENST00000301280|CHAF1A	REV__ENSG00000167670|ENST00000301280|CHAF1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3005859255791	1	573.299101	572.291825	2.1687	0.0012433	2.8278	0.0016212	4.9966	0.0028645	573.3005946109828	57.067	0.53694	57.388	57.109	57.646	0.32103					37	22	2	0	0	0	0.89176	2	23877	23877;23952		0.79363	0	1	6928400	+		37253	10871	18509	18587	43315;43316	43315					-0.0114293149651985
VGVGGGAG	8	Unmodified	_VGVGGGAG_					0	0	0			REV__ENSG00000167670|ENST00000301280|CHAF1A	REV__ENSG00000167670|ENST00000301280|CHAF1A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	573.299101	572.291825	1.7263	0.0009897	4.6094	0.0026426	6.3357	0.0036323	573.3016519936833	57.642	0.48753	57.642	57.425	57.912	0	0.12724	0.00049395	NaN	0.79363	34	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6133500	+		37254	10871	18509	18587							-0.0114293149651985
VGVGGPLK	8	Unmodified	_VGVGGPLK_					0	0	0			REV__ENST00000589009.5_1_19:10227257-10229639:-|nuORF	REV__ENST00000589009.5_1_19:10227257-10229639:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	726.4581176638603	1	726.450851	725.443575	1.8542	0.001347	1.3992	0.0010164	3.2533	0.0023634	726.4532414395902	63.024	0.25066	63.354	63.255	63.505	0.32974					12	7	2	0	0	0	0.89176	1	26408	26408		0.79363	0	1	444910	+		37255	14048	18510	18588	43317	43317					0.06987049531187495
VGVGIRNR	8	Unmodified	_VGVGIRNR_					0	0	0			REV__ENSG00000079999|ENST00000171111|KEAP1	REV__ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7667114138603	2	435.767043	869.519533	1.0663	0.00046466	0.45089	0.00019648	1.5172	0.00066114	435.76692529630117	70.367	1.2651	70.367	69.675	70.94	0					89	40	3	0	0	0	0.89176	1	29340	29340		0.79363	0	1	4790100	+		37256	8803	18511	18589	43318	43318					0.07955446431321889
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	382.2206298708916	2	382.221072	762.42759	1.8072	0.00069076	-1.8946	-0.00072416	-0.087382	-3.3399E-05	382.2205364113196	66.692	0.31393	67.016	66.876	67.19	0.32449					15	9	2	0	0	0	0.88958	1	27923	27923		2.8892	0	1	1211300	+		37257	15250	18512	18590	43319	43319					0.03687343294279799
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.2213317751884	2	382.221072	762.42759	2.3044	0.00088077	-2.6409	-0.0010094	-0.33656	-0.00012864	382.2199663817389	61.249	0.5843	62.667	62.312	62.896	1.4177					39	18	3	0	0	0	0.88958	1	25639	25639		2.8892	0	1	9193800	+		37258	15250	18512	18590	43320	43320					0.03687343294279799
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	382.221072	762.42759	-0.33761	-0.00012904	0.54137	0.00020692	0.20376	7.7883E-05	382.22168247013803	66.908	0.3187	66.908	66.671	66.99	0	-0.16089	0.0025291	NaN	2.8892	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	685410	+		37259	15250	18512	18590							0.03687343294279799
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	382.221072	762.42759	1.8072	0.00069076	-1.8946	-0.00072416	-0.087382	-3.3399E-05	382.2205364113196	66.692	0.31393	67.016	66.876	67.19	0.32449	-0.053184	0.00066697	NaN	2.8892	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1211300	+		37260	15250	18512	18590							0.03687343294279799
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	382.221072	762.42759	1.6719	0.00063902	-3.4744	-0.001328	-1.8025	-0.00068896	382.2199037205434	65.711	0.33788	67.11	66.941	67.279	1.3989	0.040996	-0.00054067	NaN	2.8892	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	733140	+		37261	15250	18512	18590							0.03687343294279799
VGVGLTAF	8	Unmodified	_VGVGLTAF_					0	0	0			REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	REV__tr|A0A553STN6|A0A553STN6_NIACICytochromeubiquinoloxidasesubunitIOS=NialliacirculansOX=1397GN=CEQ21_05325PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	382.221072	762.42759	1.5417	0.00058926	-3.4663	-0.0013249	-1.9246	-0.00073563	382.2198198892767	65.334	0.31225	67.242	67.095	67.407	1.9085	0.17308	-0.00053451	NaN	2.8892	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	568980	+		37262	15250	18512	18590							0.03687343294279799
VGVGQRRA	8	Unmodified	_VGVGQRRA_					0	0	0			REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	842.4968139529228	1	842.49551	841.488233	1.6731	0.0014096	-0.02663	-2.2436E-05	1.6465	0.0013872	842.4949233047357	71.908	0.31503	71.908	71.732	72.047	0					17	9	2	0	0	0	0.89176	2	29926	29926;29976		0.79363	0	1	2024400	+		37263	14030	18513	18591	43321;43322	43321					0.06114873397223164
VGVGQRRA	8	Unmodified	_VGVGQRRA_					0	0	0			REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	842.49551	841.488233	1.6731	0.0014096	-0.02663	-2.2436E-05	1.6465	0.0013872	842.4949233047357	71.908	0.31503	71.908	71.732	72.047	0	-0.052265	-0.00048908	NaN	0.79363	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2024400	+		37264	14030	18513	18591							0.06114873397223164
VGVGQRRA	8	Unmodified	_VGVGQRRA_					0	0	0			REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	REV__ENST00000586353.5_1_19:37464260-37464449:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	842.49551	841.488233	1.7372	0.0014635	1.0256	0.00086403	2.7627	0.0023276	842.4960187767418	71.689	0.37852	72.012	71.816	72.195	0.32359	0.052265	0.00039739	NaN	0.79363	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1777800	+		37265	14030	18513	18591							0.06114873397223164
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2679626345634	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2576	1	2.2576	1.7576	2.7576	0								0	0	0	1.0178	1	926	926		0.79363	0	1				37266	6365	18514	18592	43323	43323					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2680541872978	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7226	1	2.7226	2.2226	3.2226	0								0	0	0	1.0178	1	1116	1116		0.79363	0	1				37267	6365	18514	18592	43324	43324					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2688171267509	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3105	1	3.3105	2.8105	3.8105	0								0	0	0	1.0178	1	1358	1358		0.79363	0	1				37268	6365	18514	18592	43325	43325					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2682983279228	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2521	1	4.2521	3.7521	4.7521	0								0	0	0	1.0178	1	1748	1748		0.79363	0	1				37269	6365	18514	18592	43326	43326					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2690002322197	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6314	1	5.6314	5.1314	6.1314	0								0	0	0	1.0178	1	2313	2313		0.79363	0	1				37270	6365	18514	18592	43327	43327					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2691528201103	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9582	1	5.9582	5.4582	6.4582	0								0	0	0	1.0178	1	2448	2448		0.79363	0	1				37271	6365	18514	18592	43328	43328					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2710754275322	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9229	1	6.0028	5.5028	6.5028	0.079923								0	0	0	1.0178	1	2449	2449		0.79363	0	1				37272	6365	18514	18592	43329	43329					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2687255740166	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6406	1	7.7169	7.2169	8.2169	0.07632								0	0	0	1.0178	1	3161	3161		0.79363	0	1				37273	6365	18514	18592	43330	43330					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2686645388603	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2101	1	6.8313	6.3313	7.3313	0.62127								0	0	0	1.0178	1	2565	2565		0.69038	0	1				37274	6365	18514	18592	43331	43331					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2680236697197	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3609	1	8.9974	8.4974	9.4974	0.63651								0	0	0	1.0178	1	3466	3466		0.79363	0	1				37275	6365	18514	18592	43332	43332					0.10394116205168302
VGVGRKLP	8	Unmodified	_VGVGRKLP_					0	0	0		ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	ENST00000406721.7_1_9:139633979-139636154:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2686340212822	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5739	1	5.3103	4.8103	5.8103	0.73642								0	0	0	1.0178	1	1895	1895		0.79363	0	1				37276	6365	18514	18592	43333	43333					0.10394116205168302
VGVIFQWFLI	10	Unmodified	_VGVIFQWFLI_					0	0	0			REV__ENSG00000181072|ENST00000680005|CHRM2	REV__ENSG00000181072|ENST00000680005|CHRM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	611.3577148318291	2	611.35516	1220.69577	2.1106	0.0012903	0.6403	0.00039145	2.7509	0.0016818	611.3552112816064	78.111	0.78645	78.111	77.749	78.535	0					45	24	2	0	0	0	0.89803	1	32670	32670		0.45834	0	1	1005400	+		37277	11312	18515	18593	43334	43334					0.09424642821886664
VGVIFQWFLI	10	Unmodified	_VGVIFQWFLI_					0	0	0			REV__ENSG00000181072|ENST00000680005|CHRM2	REV__ENSG00000181072|ENST00000680005|CHRM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3578979372978	2	611.35516	1220.69577	2.255	0.0013786	0.63327	0.00038715	2.8882	0.0017657	611.3553418143983	75.827	0.7072	76.148	75.804	76.511	0.32163					47	22	3	0	0	0	0.89803	1	31740	31740		0.45834	0	1	996460	+		37278	11312	18515	18593	43335	43335					0.09424642821886664
VGVIGMISRIK	11	Unmodified	_VGVIGMISRIK_					0	0	0			REV__tr|A0A7D6ZRV7|A0A7D6ZRV7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13650PE=4SV=1	REV__tr|A0A7D6ZRV7|A0A7D6ZRV7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13650PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2843810915947	3	391.577643	1171.7111	0.77051	0.00030172	-2.8124	-0.0011013	-2.0419	-0.00079954	391.5760150057711	24.783	0.9292	26.024	25.823	26.752	1.241					69	30	3	0	0	0	0.14606	1	10666	10666		2.6312	1.669	1	2470600	+		37279	15696	18516	18594	43336	43336					0.13211186347416515
VGVIGMISRIK	11	Unmodified	_VGVIGMISRIK_					0	0	0			REV__tr|A0A7D6ZRV7|A0A7D6ZRV7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13650PE=4SV=1	REV__tr|A0A7D6ZRV7|A0A7D6ZRV7_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13650PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2842590212822	3	391.577643	1171.7111	0.40459	0.00015843	-3.002	-0.0011755	-2.5974	-0.0010171	391.5760201856307	24.464	0.99696	26.149	25.907	26.903	1.6845					74	33	3	0	0	0	0.14606	1	10143	10143		2.6312	0.88896	1	2337400	+		37280	15696	18516	18594	43337	43337					0.13211186347416515
VGVIIQVP	8	Unmodified	_VGVIIQVP_					0	0	0			REV__ABCC8|p.I1235Dfs*20|1|0.2|ENSG00000006071|chr11:17398359-17398389|TGTTGGCAGCTGTGAGGAAGAGGGAAGCAAT/-|frameshift_variant	REV__ABCC8|p.I1235Dfs*20|1|0.2|ENSG00000006071|chr11:17398359-17398389|TGTTGGCAGCTGTGAGGAAGAGGGAAGCAAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7684203982353	2	412.765646	823.516739	0.82015	0.00033853	3.69	0.0015231	4.5101	0.0018616	412.7678000723951	21.665	0.30227	22.842	22.719	23.022	1.177					15	9	2	0	0	0	0.89008	1	9060	9060		2.5775	0	1	837870	+		37281	8073	18517	18595	43338	43338					0.0979217825380374
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7444030642509	2	377.744714	753.474875	2.6099	0.00098589	-1.8838	-0.00071158	0.72618	0.00027431	377.7433460078368	74.11	0.77045	75.428	74.998	75.768	1.318					55	24	4	0	0	0	0.89176	3	31042	31042;31086;31145		0.79363	0	1	3912600	+		37282	8621	18518	18596	43339;43340;43341	43339					0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4801513552666	1	754.482151	753.474875	2.7781	0.0020961	-3.8167	-0.0028796	-1.0385	-0.00078356	754.4792631913025	74.096	0.37375	75.414	75.187	75.561	1.318					17	11	2	0	0	0	0.89176	1	31081	31081		0.79363	0	1	1355300	+		37283	8621	18518	18596	43342	43342					0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	754.4794799685478	1	754.482151	753.474875	2.3886	0.0018022	-2.5726	-0.001941	-0.18403	-0.00013885	754.4790271524388	73.756	0.40022	75.552	75.317	75.717	1.7962					15	12	2	0	0	0	0.89176	1	30909	30909		0.79363	0	1	1300400	+		37284	8621	18518	18596	43343	43343					0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7438232302666	2	377.744714	753.474875	2.5823	0.00097546	-2.0959	-0.0007917	0.48648	0.00018376	377.7431330932197	73.725	1.6226	75.521	74.278	75.9	1.7962					69	51	2	0	0	0	0.89176	1	30958	30958		0.79363	0	1	3559300	+		37285	8621	18518	18596	43344	43344					0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	754.482151	753.474875	1.9884	0.0015002	-3.8886	-0.0029339	-1.9002	-0.0014337	754.479136605692	75.225	0.41164	75.225	75.027	75.439	0	-0.16017	-5.3102E-05	NaN	0.79363	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2216500	+		37286	8621	18518	18596							0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	754.482151	753.474875	2.5299	0.0019088	-3.9336	-0.0029678	-1.4036	-0.001059	754.4791585320273	75.026	0.47134	75.35	75.082	75.553	0.32464	-0.034842	-8.6992E-05	NaN	0.79363	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2203600	+		37287	8621	18518	18596							0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	754.482151	753.474875	2.7781	0.0020961	-3.8167	-0.0028796	-1.0385	-0.00078356	754.4792631913025	74.096	0.37375	75.414	75.187	75.561	1.318	0.028289	1.1881E-06	NaN	0.79363	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1355300	+		37288	8621	18518	18596							0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	377.744714	753.474875	2.6099	0.00098589	-1.8838	-0.00071158	0.72618	0.00027431	377.7433460078368	74.11	0.77045	75.428	74.998	75.768	1.318	-0.046511	7.2879E-05	NaN	0.79363	55	24	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3912600	+		37289	8621	18518	18596							0.08827622565263482
VGVKAIPA	8	Unmodified	_VGVKAIPA_					0	0	0			REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	REV__nc|ENSG00000050405|Q9UHB6-3|LIMA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	754.482151	753.474875	2.3886	0.0018022	-2.5726	-0.001941	-0.18403	-0.00013885	754.4790271524388	73.756	0.40022	75.552	75.317	75.717	1.7962	0.16672	0.0009398	NaN	0.79363	15	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1300400	+		37290	8621	18518	18596							0.08827622565263482
VGVKKPRQQR	10	Unmodified	_VGVKKPRQQR_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2497131228447	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.616	1	23.849	23.349	24.349	0.23306								0	0	0	0.66254	1	9848	9848		0.15932	0	1		+		37291	9912	18519	18597	43345	43345					0.14134698402403956
VGVKKPRQQR	10	Unmodified	_VGVKKPRQQR_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2518798708916	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.37	1	23.547	23.047	24.047	1.177								0	0	0	0.66254	1	9348	9348		0.15932	0	1		+		37292	9912	18519	18597	43346	43346					0.14134698402403956
VGVKKPRQQR	10	Unmodified	_VGVKKPRQQR_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2509033083916	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.94	1	14.768	14.268	15.268	0.82789								0	0	0	0.66254	1	5781	5781		0.15932	0	1		+		37293	9912	18519	18597	43347	43347					0.14134698402403956
VGVKKPRQQR	10	Unmodified	_VGVKKPRQQR_					0	0	0			REV__ENSG00000134697|ENST00000373062|GNL2	REV__ENSG00000134697|ENST00000373062|GNL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2495910525322	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.975	1	18.277	17.777	18.777	1.3023								0	0	0	0.66254	1	7052	7052		0.15932	0	1		+		37294	9912	18519	18597	43348	43348					0.14134698402403956
VGVKPLGR	8	Unmodified	_VGVKPLGR_					0	0	0			REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2698547244072	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.231	1	5.319	4.819	5.819	0.08803								0	0	0	1.0178	1	2161	2161		0.79363	0	1		+		37295	12888	18520	18598	43349	43349					0.1039411620519104
VGVKPLGR	8	Unmodified	_VGVKPLGR_					0	0	0			REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2687866091728	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6212	1	5.7011	5.2011	6.2011	0.079923								0	0	0	1.0178	1	2323	2323		0.79363	0	1		+		37296	12888	18520	18598	43350	43350					0.1039411620519104
VGVKPLGR	8	Unmodified	_VGVKPLGR_					0	0	0			REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2686950564384	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9413	1	2.5755	2.0755	3.0755	0.63417								0	0	0	1.0178	1	796	796		0.79363	0	1		+		37297	12888	18520	18598	43351	43351					0.1039411620519104
VGVKPLGR	8	Unmodified	_VGVKPLGR_					0	0	0			REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2693969607353	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6258	1	3.26	2.76	3.76	0.63417								0	0	0	1.0178	1	1081	1081		2.5775	0	1		+		37298	12888	18520	18598	43352	43352					0.1039411620519104
VGVKPLGR	8	Unmodified	_VGVKPLGR_					0	0	0			REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	REV__ENST00000402119.8_1_19:16045502-16045571:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2686035037041	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7454	1	4.369	3.869	4.869	0.62362								0	0	0	1.0178	1	1546	1546		0.79363	0	1		+		37299	12888	18520	18598	43353	43353					0.1039411620519104
VGVLILFMFR	10	Unmodified	_VGVLILFMFR_					0	0	0		nc|ENSG00000130653|Q6ZV29-2|PNPLA7;PNPLA7|p.V595Dfs*35|1|0.23|ENSG00000130653|chr9:137498144-137498145|-/T|frameshift_variant;nc|ENSG00000130653|Q6ZV29-3|PNPLA7;nc|ENSG00000130653|Q6ZV29-4|PNPLA7;nc|ENSG00000130653|Q6ZV29|PNPLA7;ENSG00000130653|ENST00000406427|PNPLA7	nc|ENSG00000130653|Q6ZV29-2|PNPLA7	nc|ENSG00000130653|Q6ZV29-2|PNPLA7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8574706912041	2	597.857012	1193.69947	2.1578	0.00129	-1.1189	-0.00066893	1.0389	0.00062111	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.89803	1	31840	31840		1.6526	0.17072	1	9732000			37300	2447	18521	18599	43354	43354					0.11036989324088609
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2843505740166	2	391.760364	781.506175	0.71258	0.00027916	4.3449	0.0017022	5.0575	0.0019813	391.7614495306911	22.043	0.3227	22.266	22.114	22.436	0.223					22	10	3	0	0	0	2.3239	1	9249	9249		5.7604	0	1	2149600	+		37301	9812	18522	18600	43355	43355					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2844421267509	2	391.760364	781.506175	0.37721	0.00014778	2.9664	0.0011621	3.3436	0.0013099	391.7611664243584	21.113	0.23198	22.238	22.102	22.334	1.1254					17	7	4	0	0	0	2.3239	1	8775	8775		0.69038	0	1	2012300	+		37302	9812	18522	18600	43356	43356					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2841369509697	2	391.760364	781.506175	0.016805	6.5834E-06	3.0674	0.0012017	3.0842	0.0012083	391.7612332911518	18.462	0.19244	19.441	19.341	19.534	0.97922					10	7	2	0	0	0	2.3239	1	7715	7715		5.7604	0	1	381190	+		37303	9812	18522	18600	43357	43357					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2843505740166	2	391.760364	781.506175	0.061698	2.4171E-05	4.3429	0.0017014	4.4046	0.0017255	391.76057435624546	18.767	0.20838	19.746	19.626	19.834	0.97922					14	6	3	0	0	0	2.3239	1	7853	7853		0.69038	0	1	620430	+		37304	9812	18522	18600	43358	43358					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843200564384	2	391.760364	781.506175	0.15	5.8763E-05	1.4967	0.00058636	1.6467	0.00064512	391.7606555581192	18.279	0.23658	19.727	19.581	19.817	1.448					12	7	2	0	0	0	2.3239	1	7628	7628		2.5775	0	1	746040	+		37305	9812	18522	18600	43359	43359					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843200564384	2	391.760364	781.506175	0.1386	5.4296E-05	3.6995	0.0014493	3.8381	0.0015036	391.76159249982084	17.983	0.17365	19.431	19.318	19.492	1.448					9	5	2	0	0	0	2.3239	1	7457	7457		2.5775	0	1	534020	+		37306	9812	18522	18600	43360	43360					0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	391.760364	781.506175	-0.83998	-0.00032907	5.3031	0.0020776	4.4632	0.0017485	391.76222846737477	22.312	0.21786	22.312	22.183	22.401	0	0.031723	0.0011812	NaN	5.7604	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1639900	+		37307	9812	18522	18600							0.10668195599373576
VGVLLGPK	8	Unmodified	_VGVLLGPK_					0	0	0			REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	REV__nc|ENSG00000131067|Q9UJ14-4|GGT7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	391.760364	781.506175	0.25011	9.7984E-05	2.9007	0.0011364	3.1508	0.0012343	391.7615393521964	20.731	0.2008	22.306	22.18	22.38	1.5748	0.025238	-0.00070119	NaN	5.7604	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1975600	+		37308	9812	18522	18600							0.10668195599373576
VGVLQRHVSR	10	Unmodified	_VGVLQRHVSR_					0	0	0		nc|ENSG00000093009|O75419-2|CDC45;ENSG00000093009|ENST00000263201|CDC45;nc|ENSG00000093009|O75419-3|CDC45	nc|ENSG00000093009|O75419-2|CDC45	nc|ENSG00000093009|O75419-2|CDC45	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8452026247978	2	575.843813	1149.67307	1.7289	0.00099559	-0.7083	-0.00040787	1.0206	0.00058772	575.8431725068309	75.006	2.1512	75.006	73.983	76.135	0					208	67	4	0	0	0	0.89803	1	30903	30903		0.45834	0	1	9020800			37309	1171	18523	18601	43361	43361					0.10422436476960684
VGVLRKTRH	9	Unmodified	_VGVLRKTRH_					0	0	0		ENST00000497784.1_2_7:140434399-140508041:-|nuORF;ENSG00000157764|ENST00000646891|BRAF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	ENST00000497784.1_2_7:140434399-140508041:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	355.0698119997978	3	355.892842	1064.6567	1.2611	0.00044881	-1.4563	-0.00051828	-0.19522	-6.9477E-05	356.22645665040113	77.917	0.15508	79.668	79.622	79.777	1.7514					6	4	2	0	0	0	0.11954	1	32678	32678		0.26902	0	1	173930			37310	3480	18524	18602	43362	43362					0.12695355310870582
VGVLYKYY	8	Unmodified	_VGVLYKYY_					0	0	0		tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	tr|A0A7D7A242|A0A7D7A242_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_18110PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	502.7872497439384	2	502.776211	1003.53787	2.5099	0.0012619	-2.9413	-0.0014788	-0.43141	-0.0002169	502.7750538570406	76.221	0.28217	77.988	77.813	78.095	1.7672					10	8	2	0	0	0	2.3239	1	31908	31908		13.508	0	1	717900			37311	17252	18525	18603	43363	43363					0.03624143562649351
VGVMKYFSFVN	11	Unmodified	_VGVMKYFSFVN_					0	0	0		ENST00000534336.1_1_11:65268519-65268612:+|nuORF	ENST00000534336.1_1_11:65268519-65268612:+|nuORF	ENST00000534336.1_1_11:65268519-65268612:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887206912041	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.09	1	114.09	113.59	114.59	0								0	0	0	0.63775	1	49271	49271		0.50596	0.051438	1				37312	7189	18526	18604	43364	43364					0.014592008395311495
VGVMKYFSFVN	11	Unmodified	_VGVMKYFSFVN_					0	0	0		ENST00000534336.1_1_11:65268519-65268612:+|nuORF	ENST00000534336.1_1_11:65268519-65268612:+|nuORF	ENST00000534336.1_1_11:65268519-65268612:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893615603447	3	430.889886	1289.64783	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.16	1	113.21	112.71	113.71	0.044189								0	0	0	0.63775	1	48748	48748		0.50596	0.2991	1				37313	7189	18526	18604	43365	43365					0.014592008395311495
VGVNHNAL	8	Unmodified	_VGVNHNAL_					0	0	0		tr|A0A553SJB4|A0A553SJB4_NIACICatalaseOS=NialliacirculansOX=1397GN=CEQ21_16440PE=3SV=1	tr|A0A553SJB4|A0A553SJB4_NIACICatalaseOS=NialliacirculansOX=1397GN=CEQ21_16440PE=3SV=1	tr|A0A553SJB4|A0A553SJB4_NIACICatalaseOS=NialliacirculansOX=1397GN=CEQ21_16440PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2273132205009	2	412.224677	822.434801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.712	1	23.926	23.426	24.426	1.2145								0	0	0	1.0178	1	9492	9492		2.8892	0	1				37314	16237	18527	18605	43366	43366					0.016480758947068352
VGVPFHPA	8	Unmodified	_VGVPFHPA_					0	0	0			REV__SVA_D_dup1417|chr21:8350923-8352925:-|16.64451059665088|0.0287746324772857|9.18|429.0|64|2|anti-sense	REV__SVA_D_dup1417|chr21:8350923-8352925:-|16.64451059665088|0.0287746324772857|9.18|429.0|64|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	412.2266418337822	2	412.226688	822.438824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.686	1	23.928	23.428	24.428	0.24251								0	0	0	1.0178	1	9878	9878		0.79363	0	1		+		37315	14671	18528	18606	43367	43367					0.02050165388413916
VGVPLALGV	9	Unmodified	_VGVPLALGV_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7675048708916	2	412.765646	823.516739	0.92078	0.00038007	3.4747	0.0014342	4.3955	0.0018143	412.76743857427806	22.384	0.23769	22.607	22.494	22.731	0.223					16	7	3	0	0	0	0.75267	1	9326	9326		5.2307	0	1	1975800	+		37316	10864	18529	18607	43368	43368					0.09792178253815109
VGVPLALGV	9	Unmodified	_VGVPLALGV_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7672912478447	2	412.765646	823.516739	0.73551	0.00030359	1.8558	0.00076601	2.5913	0.0010696	412.7668122589092	21.061	0.29168	22.186	22.013	22.305	1.1254					16	9	2	0	0	0	0.82604	1	8791	8791		2.3027	0	1	1097800	+		37317	10864	18529	18607	43369	43369					0.09792178253815109
VGVPLALGV	9	Unmodified	_VGVPLALGV_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	412.765646	823.516739	-0.22522	-9.2964E-05	4.2401	0.0017502	4.0148	0.0016572	412.7677033763001	22.689	0.20173	22.689	22.578	22.78	0	0.079598	0.0010862	NaN	5.2307	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2007500	+		37318	10864	18529	18607							0.09792178253815109
VGVPLALGV	9	Unmodified	_VGVPLALGV_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.765646	823.516739	0.92078	0.00038007	3.4747	0.0014342	4.3955	0.0018143	412.76743857427806	22.384	0.23769	22.607	22.494	22.731	0.223	-0.0027535	0.00045439	NaN	5.2307	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1975800	+		37319	10864	18529	18607							0.09792178253815109
VGVPLALGV	9	Unmodified	_VGVPLALGV_					0	0	0			REV__ENSG00000167394|ENST00000300849|ZNF668	REV__ENSG00000167394|ENST00000300849|ZNF668	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	412.765646	823.516739	0.78485	0.00032396	2.0205	0.00083399	2.8053	0.0011579	412.7671007614132	21.421	0.30478	22.598	22.415	22.719	1.177	-0.01184	-0.00074612	NaN	5.2307	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751800	+		37320	10864	18529	18607							0.09792178253815109
VGVPLIVSP	9	Unmodified	_VGVPLIVSP_					0	0	0		ENST00000571495.1_1_17:2585080-2585146:+|nuORF	ENST00000571495.1_1_17:2585080-2585146:+|nuORF	ENST00000571495.1_1_17:2585080-2585146:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	441.0326110720634	2	440.778754	879.542954	1.0236	0.00045116	2.9611	0.0013052	3.9846	0.0017563	440.7799020189299	38.043	0.15091	39.863	39.759	39.91	1.8202					7	4	2	0	0	0	0.11908	1	15945	15945		2.0598	0	1	1073600			37321	7395	18530	18608	43370	43370					0.09836447425277584
VGVPLPPAIA	10	Unmodified	_VGVPLPPAIA_					0	0	0			REV__ENST00000355105.7_1_1:46126895-46152108:-|nuORF	REV__ENST00000355105.7_1_1:46126895-46152108:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	933.5768920779228	1	933.57678	932.569503	1.1486	0.0010723	-0.12728	-0.00011882	1.0214	0.00095351	933.5759861726116	106.21	0.13104	106.21	106.13	106.26	0					15	6	3	0	0	0	0.89803	1	45258	45258		0	0	1	22782000	+		37322	12541	18531	18609	43371	43371					0.10052136316585347
VGVPNLLL	8	Unmodified	_VGVPNLLL_					0	0	0			REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7668640017509	2	412.765646	823.516739	0.9343	0.00038565	1.9907	0.00082167	2.925	0.0012073	412.76694871463184	22.65	0.54106	22.884	22.741	23.282	0.23306					25	17	2	0	0	0	0.89176	1	9456	9456		0.79363	0	1	2040400	+		37323	14598	18532	18610	43372	43372					0.09792178253815109
VGVPNLLL	8	Unmodified	_VGVPNLLL_					0	0	0			REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.7673828005791	2	412.765646	823.516739	0.78485	0.00032396	2.0205	0.00083399	2.8053	0.0011579	412.7671007614132	21.421	0.30478	22.598	22.415	22.719	1.177					14	9	2	0	0	0	0.89176	1	8944	8944		0.79363	0	1	751800	+		37324	14598	18532	18610	43373	43373					0.09792178253815109
VGVPNLLL	8	Unmodified	_VGVPNLLL_					0	0	0			REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	412.2185241580009	2	412.765646	823.516739	0.82015	0.00033853	3.69	0.0015231	4.5101	0.0018616	412.7678000723951	21.665	0.30227	22.842	22.719	23.022	1.177					15	9	2	0	0	0	2.3239	1	9012	9012		0.79363	0	1	837870	+		37325	14598	18532	18610	43374	43374					0.09792178253815109
VGVPNLLL	8	Unmodified	_VGVPNLLL_					0	0	0			REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	REV__PIK3R5|p.E170G|1|0.93|ENSG00000141506|chr17:8890886-8890886|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2670776247978	2	412.765646	823.516739	0.40468	0.00016704	3.0633	0.0012644	3.468	0.0014315	412.7674816074746	21.27	0.54044	22.845	22.681	23.222	1.5748					24	17	2	0	0	0	0.89176	1	8848	8848		0.79363	0	1	2577300	+		37326	14598	18532	18610	43375	43375					0.09792178253815109
VGVPPPAT	8	Unmodified	_VGVPPPAT_					0	0	0		ENSG00000261221|ENST00000568956|ZNF865	ENSG00000261221|ENST00000568956|ZNF865	ENSG00000261221|ENST00000568956|ZNF865	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	737.4198486208916	1	737.419217	736.41194	1.8862	0.0013909	-2.5114	-0.0018519	-0.62523	-0.00046105	737.4172660685041	65.093	0.3197	65.42	65.258	65.578	0.32689					15	9	2	0	0	0	0.89176	1	27251	27251		0.79363	0	1	873140			37327	5420	18533	18611	43376	43376					0.03319056777218066
VGVPPPAT	8	Unmodified	_VGVPPPAT_					0	0	0		ENSG00000261221|ENST00000568956|ZNF865	ENSG00000261221|ENST00000568956|ZNF865	ENSG00000261221|ENST00000568956|ZNF865	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	737.419217	736.41194	1.974	0.0014557	-2.6844	-0.0019795	-0.71034	-0.00052382	737.4170757899096	65.26	0.31247	65.26	65.072	65.385	0	-0.079915	-2.9844E-05	NaN	0.79363	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	863050			37328	5420	18533	18611							0.03319056777218066
VGVPPSAK	8	Unmodified	_VGVPPSAK_					0	0	0		ENSG00000196344|ENST00000437033|ADH7;nc|ENSG00000196344|P40394|ADH7;nc|ENSG00000196344|P40394-2|ADH7	ENSG00000196344|ENST00000437033|ADH7	ENSG00000196344|ENST00000437033|ADH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	754.4446288943291	1	754.445766	753.438489	2.1604	0.0016299	-4.4181	-0.0033332	-2.2577	-0.0017033	754.4419484789505	63.431	0.31643	63.431	63.208	63.524	0					12	9	2	0	0	0	0.89008	1	26433	26433		2.5775	0	1	520330			37329	4933	18534	18612	43377	43377					0.05190745668562613
VGVPQPLA	8	Unmodified	_VGVPQPLA_					0	0	0			REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2848083376884	2	390.734346	779.454139	0.18277	7.1413E-05	-1.8423	-0.00071985	-1.6595	-0.00064844	390.7335023821005	58.689	0.32019	58.689	58.526	58.846	0					12	9	2	0	0	0	2.3239	1	24446	24446		0	0	1	755600	+		37330	8823	18535	18613	43378	43378					0.05559032185601609
VGVPQPLA	8	Unmodified	_VGVPQPLA_					0	0	0			REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	780.4601318240166	1	780.461416	779.454139	2.5501	0.0019903	-3.2428	-0.0025309	-0.69264	-0.00054058	780.4588740894798	61.281	0.42641	62.699	62.439	62.865	1.4177					23	13	2	0	0	0	0.89176	1	25719	25719		0.79363	0	1	3351100	+		37331	8823	18535	18613	43379	43379					0.05559032185601609
VGVPQPLA	8	Unmodified	_VGVPQPLA_					0	0	0			REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	REV__PGR|p.E851Sfs*8|1|0.1|ENSG00000082175|chr11:101042041-101042041|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	780.4615356326103	1	780.461416	779.454139	2.4988	0.0019502	-2.9549	-0.0023062	-0.45611	-0.00035598	780.4590797200135	60.87	0.39702	62.835	62.607	63.004	1.9653					22	12	2	0	0	0	0.89176	1	25509	25509		0.79363	0	1	2866500	+		37332	8823	18535	18613	43380	43380					0.05559032185601609
VGVPRLFNEEM	11	Unmodified	_VGVPRLFNEEM_					0	0	0			REV__ENSG00000100558|ENST00000216446|PLEK2	REV__ENSG00000100558|ENST00000216446|PLEK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.238	1	41.555	41.055	42.055	0.31683								0	0	0	0.63775	1	17325	17325		0.50596	0.23694	1		+		37333	8995	18536	18614	43381	43381					0.010571113458127002
VGVPRLFNEEM	11	Unmodified	_VGVPRLFNEEM_					0	0	0			REV__ENSG00000100558|ENST00000216446|PLEK2	REV__ENSG00000100558|ENST00000216446|PLEK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8895141482353	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.67	1	112.72	112.22	113.22	0.04554								0	0	0	0.63775	1	48552	48552		0.50596	0.34663	1		+		37334	8995	18536	18614	43382	43382					0.010571113458127002
VGVPRLFNEEM	11	Unmodified	_VGVPRLFNEEM_					0	0	0			REV__ENSG00000100558|ENST00000216446|PLEK2	REV__ENSG00000100558|ENST00000216446|PLEK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.276	1	26.536	26.036	27.036	1.2594								0	0	0	0.63775	1	10583	10583		0.50596	0.34663	1		+		37335	8995	18536	18614	43383	43383					0.010571113458127002
VGVPRLFNEEM	11	Unmodified	_VGVPRLFNEEM_					0	0	0			REV__ENSG00000100558|ENST00000216446|PLEK2	REV__ENSG00000100558|ENST00000216446|PLEK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8890563845634	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.69	1	114.87	114.37	115.37	0.18399								0	0	0	0.63775	1	49684	49684		0.50596	0.34663	1		+		37336	8995	18536	18614	43384	43384					0.010571113458127002
VGVPSGGG	8	Unmodified	_VGVPSGGG_					0	0	0		ENST00000401466.5_1_2:120436761-120438418:+|nuORF;ENST00000272521.6_1_2:120436761-120438418:+|nuORF;ENST00000424086.5_1_2:120436761-120437079:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	629.3294555544853	1	629.325316	628.31804	1.8592	0.00117	4.1227	0.0025945	5.9819	0.0037646	629.3276492447723	96.492	0.24879	96.492	96.354	96.602	0					13	7	2	0	0	0	0.89176	1	40327	40327		0.79363	0	1	3787700			37337	5680	18537	18615	43385	43385					-0.010986623250346383
VGVPSGGG	8	Unmodified	_VGVPSGGG_					0	0	0		ENST00000401466.5_1_2:120436761-120438418:+|nuORF;ENST00000272521.6_1_2:120436761-120438418:+|nuORF;ENST00000424086.5_1_2:120436761-120437079:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	629.3271362185478	1	629.325316	628.31804	2.6279	0.0016538	1.8217	0.0011465	4.4497	0.0028003	629.326393833929	97.074	0.21542	97.179	97.07	97.286	0.105					11	6	2	0	0	0	0.89176	1	40619	40619		0.79363	0	1	2934400			37338	5680	18537	18615	43386	43386					-0.010986623250346383
VGVPSGGG	8	Unmodified	_VGVPSGGG_					0	0	0		ENST00000401466.5_1_2:120436761-120438418:+|nuORF;ENST00000272521.6_1_2:120436761-120438418:+|nuORF;ENST00000424086.5_1_2:120436761-120437079:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	ENST00000401466.5_1_2:120436761-120438418:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	629.325316	628.31804	1.7753	0.0011173	4.6507	0.0029268	6.426	0.004044	629.3280978973123	97.242	0.21189	97.242	97.109	97.321	0	0.031689	0.0011897	NaN	0.79363	13	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3213100			37339	5680	18537	18615							-0.010986623250346383
VGVPTRAR	8	Unmodified	_VGVPTRAR_					0	0	0		ENST00000436072.6_1_7:37955747-37956332:-|nuORF	ENST00000436072.6_1_7:37955747-37956332:-|nuORF	ENST00000436072.6_1_7:37955747-37956332:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	855.5159179568291	1	855.515911	854.508634	1.7471	0.0014947	-0.99846	-0.0008542	0.74868	0.00064051	855.5144998374607	73.494	0.42378	73.494	73.28	73.704	0					26	13	3	0	0	0	0.89176	2	30572	30572;30622		0.79363	0	1	4572100			37340	6530	18538	18616	43387;43388	43387					0.07556044057025701
VGVPVGKKILR	11	Unmodified	_VGVPVGKKILR_					0	0	0			REV__tr|A0A7D7A3A3|A0A7D7A3A3_9CLOTPermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00710PE=3SV=1	REV__tr|A0A7D7A3A3|A0A7D7A3A3_9CLOTPermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00710PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3937255740166	2	583.392608	1164.77066	1.2724	0.00074231	0.39877	0.00023264	1.6712	0.00097495	583.3928635231267	107.52	0.21248	107.52	107.41	107.62	0					33	10	5	0	0	0	1.0393	1	46082	46082		0.35063	0.35063	1	238000000	+		37341	15861	18539	18617	43389	43389					0.19486825353124004
VGVPWFFLYY	10	Unmodified	_VGVPWFFLYY_					0	0	0		tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8892394900322	3	430.890104	1289.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.824	1	21.824	21.324	22.324	0								0	0	0	0.66218	1	9075	9075		0.77653	0.27058	1				37342	16546	18540	18618	43390	43390					0.015243635509023079
VGVPWFFLYY	10	Unmodified	_VGVPWFFLYY_					0	0	0		tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	tr|A0A553SR93|A0A553SR93_NIACIPTSglucosetransportersubunitIIBOS=NialliacirculansOX=1397GN=CEQ21_00450PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.890104	1289.64848	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.54	1	21.763	21.263	22.263	0.223								0	0	0	0.66218	1	8956	8956		0.77653	0.27058	1				37343	16546	18540	18618	43391	43391					0.015243635509023079
VGVQAVLA	8	Unmodified	_VGVQAVLA_					0	0	0			REV__chr11:62717189-62718568|110|28.06|0.0|21.42|-|1|TE_info:AluSx1,AluSx1_dup70421,Alu,SINE,donor,+,62718568,62718713|HNRNPUL2-BSCL2,None|2	REV__chr11:62717189-62718568|110|28.06|0.0|21.42|-|1|TE_info:AluSx1,AluSx1_dup70421,Alu,SINE,donor,+,62718568,62718713|HNRNPUL2-BSCL2,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	756.4603149294853	1	756.461416	755.454139	2.2161	0.0016764	-3.9132	-0.0029602	-1.6971	-0.0012838	756.4580656029375	60.176	0.78677	60.176	59.915	60.701	0					36	25	2	0	0	0	0.89176	1	25144	25144		0.79363	0	1	1013100	+		37344	8238	18541	18619	43392	43392					0.06663032185599604
VGVQAVLA	8	Unmodified	_VGVQAVLA_					0	0	0			REV__chr11:62717189-62718568|110|28.06|0.0|21.42|-|1|TE_info:AluSx1,AluSx1_dup70421,Alu,SINE,donor,+,62718568,62718713|HNRNPUL2-BSCL2,None|2	REV__chr11:62717189-62718568|110|28.06|0.0|21.42|-|1|TE_info:AluSx1,AluSx1_dup70421,Alu,SINE,donor,+,62718568,62718713|HNRNPUL2-BSCL2,None|2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	756.4572631716728	1	756.461416	755.454139	2.2603	0.0017099	-3.3778	-0.0025552	-1.1175	-0.00084532	756.4585879536525	60.007	0.95238	60.335	59.903	60.856	0.32809					39	30	2	0	0	0	0.89176	4	25084	25084;25147;25199;25263		0.79363	0	1	981360	+		37345	8238	18541	18619	43393;43394;43395;43396	43393					0.06663032185599604
VGVQLPAA	8	Unmodified	_VGVQLPAA_					0	0	0			REV__ENSG00000124743|ENST00000370905|KLHL31	REV__ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4446899294853	1	754.445766	753.438489	1.8833	0.0014208	-2.0454	-0.0015431	-0.16211	-0.0001223	754.443782634839	64.121	0.56931	64.45	64.056	64.626	0.32899					25	17	2	0	0	0	0.89176	1	26873	26873		0.79363	0	1	1029700	+		37346	9655	18542	18620	43397	43397					0.05190745668551244
VGVQLPAA	8	Unmodified	_VGVQLPAA_					0	0	0			REV__ENSG00000124743|ENST00000370905|KLHL31	REV__ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4466430544853	1	754.445766	753.438489	1.8967	0.001431	-3.0771	-0.0023215	-1.1803	-0.00089049	754.4430775807334	65.132	0.5122	65.459	65.162	65.674	0.32689					35	15	3	0	0	0	0.89176	1	27343	27343		0.79363	0	1	4152000	+		37347	9655	18542	18620	43398	43398					0.05190745668551244
VGVQLPAA	8	Unmodified	_VGVQLPAA_					0	0	0			REV__ENSG00000124743|ENST00000370905|KLHL31	REV__ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4472534060478	1	754.445766	753.438489	2.2621	0.0017066	-1.7809	-0.0013436	0.4812	0.00036304	754.4443839393383	63.128	0.78976	64.542	63.869	64.659	1.4134					30	25	2	0	0	0	0.89176	2	26412	26412;26466		0.79363	0	1	968420	+		37348	9655	18542	18620	43399;43400	43399					0.05190745668551244
VGVQLPAA	8	Unmodified	_VGVQLPAA_					0	0	0			REV__ENSG00000124743|ENST00000370905|KLHL31	REV__ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4456664919853	1	754.445766	753.438489	2.0633	0.0015567	-2.5101	-0.0018938	-0.44682	-0.0003371	754.4437780332352	64.138	0.37337	65.546	65.336	65.71	1.4071					25	11	3	0	0	0	0.89176	1	26929	26929		0.79363	0	1	3105500	+		37349	9655	18542	18620	43401	43401					0.05190745668551244
VGVQLPAA	8	Unmodified	_VGVQLPAA_					0	0	0			REV__ENSG00000124743|ENST00000370905|KLHL31	REV__ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	754.4472534060478	1	754.445766	753.438489	2.224	0.0016779	-2.7497	-0.0020745	-0.52578	-0.00039668	754.4436121412382	62.637	0.6751	64.581	64.107	64.782	1.9444					28	21	2	0	0	0	0.89176	1	26329	26329		0.79363	0	1	1203600	+		37350	9655	18542	18620	43402	43402					0.05190745668551244
VGVQRGPR	8	Unmodified	_VGVQRGPR_					0	0	0		ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	868.5153686404228	1	868.51116	867.503883	1.5578	0.0013529	0.85029	0.00073849	2.4081	0.0020914	868.5109272899773	69.062	0.34108	69.062	68.893	69.234	0					18	10	2	0	0	0	0.89176	1	28734	28734		0.79363	0	1	1118200			37351	5674	18543	18621	43403	43403					0.06483159914284897
VGVQRGPR	8	Unmodified	_VGVQRGPR_					0	0	0		ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5129272341728	1	868.51116	867.503883	1.5118	0.001313	1.1872	0.0010311	2.699	0.0023441	868.5115016692066	68.914	0.34565	69.236	69.031	69.376	0.32224					18	10	2	0	0	0	0.89176	2	28826	28826;28881		0.79363	0	1	1105200			37352	5674	18543	18621	43404;43405	43404					0.06483159914284897
VGVQRGPR	8	Unmodified	_VGVQRGPR_					0	0	0		ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	ENST00000270162.6_1_21:44845383-44846918:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	868.51116	867.503883	1.9239	0.0016709	2.5997	0.0022578	4.5235	0.0039287	868.5138740317219	67.949	0.2771	69.327	69.182	69.459	1.3778	0.11854	0.00085404	NaN	0.79363	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	485640			37353	5674	18543	18621							0.06483159914284897
VGVQRLCLFV	10	Unmodified	_VGVQRLCLFV_					0	0	0		ENST00000511186.5_1_5:118788168-118811542:+|nuORF	ENST00000511186.5_1_5:118788168-118811542:+|nuORF	ENST00000511186.5_1_5:118788168-118811542:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3304321169853	2	567.328619	1132.64269	2.1376	0.0012127	1.6104	0.00091361	3.7479	0.0021263	567.3293379482881	76.171	1.2438	76.492	76.272	77.516	0.32163					84	39	3	0	0	0	0.89646	1	32156	32156		1.8442	0	1	2653400			37354	7032	18544	18622	43406	43406					0.08166941767558455
VGVQVTLLL	9	Unmodified	_VGVQVTLLL_					0	0	0			REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3067809939384	2	471.305136	940.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.191	1	25.432	24.932	25.932	1.241								0	0	0	0.42693	1	10116	10116		0.6015	0	1		+		37355	10309	18545	18623	43407	43407					0.12304405488100656
VGVQVTLLL	9	Unmodified	_VGVQVTLLL_					0	0	0			REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3070861697197	2	471.305136	940.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.48	1	29.758	29.258	30.258	1.2789								0	0	0	0.42693	1	11940	11940		0.6015	0	1		+		37356	10309	18545	18623	43408	43408					0.12304405488100656
VGVQVTLLL	9	Unmodified	_VGVQVTLLL_					0	0	0			REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	REV__IGFBP1|p.E125Rfs*5|1|0.08|ENSG00000146678|chr7:45890570-45890570|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3077270388603	2	471.305136	940.595718	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.987	1	29.763	29.263	30.263	1.7754								0	0	0	0.42693	1	11714	11714		0.6015	0	1		+		37357	10309	18545	18623	43409	43409					0.12304405488100656
VGVRGKRQ	8	Unmodified	_VGVRGKRQ_					0	0	0		ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	899.5557128787041	1	899.553359	898.546083	2.6468	0.0023809	-1.4731	-0.0013251	1.1737	0.0010558	899.5526119709183	86.872	0.64084	87.116	86.744	87.385	0.24387					45	26	2	0	0	0	0.89176	2	36351	36351;36468		0.79363	0	1	7868400			37358	6069	18546	18624	43410;43411	43410					0.09275135322650385
VGVRGKRQ	8	Unmodified	_VGVRGKRQ_					0	0	0		ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	ENST00000367590.8_1_1:180601192-180601402:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	899.553359	898.546083	2.5417	0.0022864	-1.9859	-0.0017865	0.55572	0.0004999	899.5530838523573	87.171	0.28499	87.171	87.072	87.357	0	0.027458	-0.00040136	NaN	0.79363	15	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7971600			37359	6069	18546	18624							0.09275135322650385
VGVRKQSR	8	Unmodified	_VGVRKQSR_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2876464724541	2	465.2856	928.556647	1.943	0.00090405	1.0353	0.00048172	2.9783	0.0013858	465.2857498684614	68.596	0.31494	68.596	68.453	68.768	0					15	9	2	0	0	0	0.89008	1	28563	28563		2.5775	0	1	797500	+		37360	14321	18547	18625	43412	43412					0.08951117977085232
VGVRKQSR	8	Unmodified	_VGVRKQSR_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	465.2856	928.556647	1.943	0.00090405	1.0353	0.00048172	2.9783	0.0013858	465.2857498684614	68.596	0.31494	68.596	68.453	68.768	0	-0.13309	0.00057351	NaN	2.5775	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	797500	+		37361	14321	18547	18625							0.08951117977085232
VGVRKQSR	8	Unmodified	_VGVRKQSR_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|72|2|sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	465.2856	928.556647	2.0619	0.00095936	0.46994	0.00021866	2.5318	0.001178	465.2856240857902	67.456	0.37333	68.834	68.633	69.007	1.3778	0.10479	4.7378E-05	NaN	2.5775	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	699710	+		37362	14321	18547	18625							0.08951117977085232
VGVRLPCF	8	Unmodified	_VGVRLPCF_					0	0	0			REV__ENST00000393640.8_1_16:70432915-70433221:-|nuORF	REV__ENST00000393640.8_1_16:70432915-70433221:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1207458376884	2	445.749473	889.484393	1.9726	0.00087927	0.86252	0.00038447	2.8351	0.0012637	445.7495969301222	68.84	0.34565	69.162	69.031	69.376	0.32224					16	10	2	0	0	0	2.3239	1	28804	28804		0	0	1	865990	+		37363	12816	18548	18626	43413	43413					0.035230675791581234
VGVRRGNL	8	Unmodified	_VGVRRGNL_					0	0	0		ENST00000597853.5_1_19:49560809-49560899:-|nuORF	ENST00000597853.5_1_19:49560809-49560899:-|nuORF	ENST00000597853.5_1_19:49560809-49560899:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7671691775322	2	435.767043	869.519533	1.6096	0.00070141	-0.17686	-7.7071E-05	1.4327	0.00062433	435.7667798659265	68.651	1.1119	70.504	70.056	71.168	1.853					56	35	2	0	0	0	0.88587	1	28843	28843		5.2307	0	1	1431100			37364	7530	18549	18627	43414	43414					0.07955446431321889
VGVRRLRSQL	10	Unmodified	_VGVRRLRSQL_					0	0	0			REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	593.1601440310478	2	592.372738	1182.73092	2.4726	0.0014647	-0.85581	-0.00050696	1.6168	0.00095777	592.371760937144	83.094	0.48949	83.094	82.922	83.412	0					25	15	2	0	0	0	0.12555	1	34745	34745		1.6526	1.6526	1	1046300	+		37365	12139	18550	18628	43415	43415					0.1468669840239727
VGVRRLRSQL	10	Unmodified	_VGVRRLRSQL_					0	0	0			REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	592.3742553591728	2	592.372738	1182.73092	2.1738	0.0012877	-0.44059	-0.00026099	1.7332	0.0010267	592.3722991978589	82.959	0.4936	83.229	83.029	83.523	0.27029					33	15	3	0	0	0	0.88022	1	34677	34677		3.5965	0.60125	1	1898000	+		37366	12139	18550	18628	43416	43416					0.1468669840239727
VGVRRLRSQL	10	Unmodified	_VGVRRLRSQL_					0	0	0			REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	REV__ENST00000246174.6_2_X:101856417-101857057:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	593.1591674685478	2	592.372738	1182.73092	2.1738	0.0012877	-0.44059	-0.00026099	1.7332	0.0010267	592.3722991978589	82.959	0.4936	83.229	83.029	83.523	0.27029					33	15	3	0	0	0	0.1256	1	34628	34628		0.45834	0	1	1898000	+		37367	12139	18550	18628	43417	43417					0.1468669840239727
VGVRRTDK	8	Unmodified	_VGVRRTDK_					0	0	0		ENSG00000184292|ENST00000371225|TACSTD2	ENSG00000184292|ENST00000371225|TACSTD2	ENSG00000184292|ENST00000371225|TACSTD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7787353396416	2	465.777608	929.540663	2.4643	0.0011478	0.11542	5.376E-05	2.5797	0.0012016	465.7778266821953	62.507	0.40211	62.507	62.399	62.801	0					19	12	2	0	0	0	0.89008	1	26107	26107		2.5775	0.27475	1	506640			37368	4686	18551	18629	43418	43418					0.07307411740180214
VGVRRVPPTR	10	Unmodified	_VGVRRVPPTR_					0	0	0		ENST00000368039.2_1_1:160771789-160771924:+|nuORF	ENST00000368039.2_1_1:160771789-160771924:+|nuORF	ENST00000368039.2_1_1:160771789-160771924:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8557006716728	2	568.854181	1135.69381	2.2108	0.0012576	-0.22364	-0.00012722	1.9872	0.0011304	568.8540865699008	88.409	0.8358	88.409	88.119	88.955	0					87	26	5	0	0	0	0.89803	1	37086	37086		1.6526	1.3456	1	105930000			37369	6080	18552	18630	43419	43419					0.13139026856629243
VGVRVFVHL	9	Unmodified	_VGVRVFVHL_					0	0	0			REV__nc|ENSG00000075151|O43432-4|EIF4G3	REV__nc|ENSG00000075151|O43432-4|EIF4G3	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.3199951052666	2	513.316369	1024.61818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.885	1	41.885	41.385	42.385	0								0	0	0	0.42693	1	17530	17530		2.3027	0	1		+		37370	8759	18553	18631	43420	43420					0.10686049676360199
VGVSGGVG	8	Unmodified	_VGVSGGVG_					0	0	0		ENST00000586018.5_1_19:19657205-19657403:+|nuORF	ENST00000586018.5_1_19:19657205-19657403:+|nuORF	ENST00000586018.5_1_19:19657205-19657403:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.3456909060478	1	631.340966	630.33369	2.4813	0.0015666	3.79	0.0023928	6.2713	0.0039593	631.3429927127546	86.314	0.50266	86.558	86.214	86.717	0.24387					21	16	2	0	0	0	0.89176	1	36066	36066		0.79363	0	1	486990			37371	7451	18554	18632	43421	43421					0.003736241920023531
VGVSGPGV	8	Unmodified	_VGVSGPGV_					0	0	0		tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1;tr|A0A553SPH1|A0A553SPH1_NIACIUPF0210proteinCEQ21_26365OS=NialliacirculansOX=1397GN=CEQ21_26365PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	336.1907531619072	2	336.189771	670.36499	-0.028409	-9.5508E-06	3.4044	0.0011445	3.376	0.001135	336.19075073459595	18.532	0.23522	18.705	18.573	18.808	0.17285					12	7	2	0	0	0	0.89176	1	7700	7700		0.79363	0	1	813510			37372	16468	18555	18633	43422	43422					0.016621972261077644
VGVSGPGV	8	Unmodified	_VGVSGPGV_					0	0	0		tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1;tr|A0A553SPH1|A0A553SPH1_NIACIUPF0210proteinCEQ21_26365OS=NialliacirculansOX=1397GN=CEQ21_26365PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1901122927666	2	336.189771	670.36499	-0.45097	-0.00015161	4.1192	0.0013848	3.6683	0.0012332	336.1903810180514	19.929	0.34823	20.988	20.762	21.11	1.0585					22	10	3	0	0	0	0.89176	1	8325	8325		0.79363	0	1	448290			37373	16468	18555	18633	43423	43423					0.016621972261077644
VGVSGPGV	8	Unmodified	_VGVSGPGV_					0	0	0		tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1;tr|A0A553SPH1|A0A553SPH1_NIACIUPF0210proteinCEQ21_26365OS=NialliacirculansOX=1397GN=CEQ21_26365PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	336.189771	670.36499	-2.5488	-0.00085687	4.1133	0.0013829	1.5645	0.00052598	336.190474565816	21.071	0.31183	21.071	20.848	21.16	0	0.11388	0.00034269	NaN	0.79363	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	353580			37374	16468	18555	18633							0.016621972261077644
VGVSGPGV	8	Unmodified	_VGVSGPGV_					0	0	0		tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1;tr|A0A553SPH1|A0A553SPH1_NIACIUPF0210proteinCEQ21_26365OS=NialliacirculansOX=1397GN=CEQ21_26365PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	336.189771	670.36499	-2.646	-0.00088956	4.7868	0.0016093	2.1408	0.0007197	336.1913702871031	18.911	0.27435	18.911	18.739	19.013	0	0.13408	0.00073286	NaN	0.79363	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	724880			37375	16468	18555	18633							0.016621972261077644
VGVSGPGV	8	Unmodified	_VGVSGPGV_					0	0	0		tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1;tr|A0A553SPH1|A0A553SPH1_NIACIUPF0210proteinCEQ21_26365OS=NialliacirculansOX=1397GN=CEQ21_26365PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	tr|A0A7D6ZVR6|A0A7D6ZVR6_9CLOTUPF0210proteinHZF06_05225OS=ClostridiumintestinaleOX=36845GN=HZF06_05225PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	336.189771	670.36499	-0.21544	-7.2428E-05	2.9229	0.00098266	2.7075	0.00091023	336.19045083945076	17.437	0.19353	18.739	18.647	18.84	1.3023	-0.037987	-0.00052036	NaN	0.79363	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1138400			37376	16468	18555	18633							0.016621972261077644
VGVSLLHQFI	10	Unmodified	_VGVSLLHQFI_					0	0	0		ENST00000283131.3_1_4:144434858-144434999:+|nuORF	ENST00000283131.3_1_4:144434858-144434999:+|nuORF	ENST00000283131.3_1_4:144434858-144434999:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1011840701103	3	371.553603	1111.63898	0.01321	4.9084E-06	0.60104	0.00022332	0.61425	0.00022823	371.55390759981555	28.795	0.30475	30.078	29.917	30.222	1.2825					23	9	3	0	0	0	0.12559	1	12131	12131		0.15932	0	1	2523800			37377	5707	18556	18634	43424	43424					0.08762595265375239
VGVSTLQIVPI	11	Unmodified	_VGVSTLQIVPI_					0	0	0			REV__ENSG00000135577|ENST00000258042|NMBR	REV__ENSG00000135577|ENST00000258042|NMBR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3494750857353	2	563.347532	1124.68051	1.8739	0.0010557	1.3191	0.00074309	3.193	0.0017988	563.3479524823888	61.86	0.30978	62.19	62.012	62.321	0.32974					23	9	3	0	0	0	0.74096	1	25884	25884		17.113	0.1706	1	1531700	+		37378	9947	18557	18635	43425	43425					0.12315731234025407
VGVVAKAFI	9	Unmodified	_VGVVAKAFI_					0	0	0			REV__nc|ENSG00000007341|Q8TDW4-7|ST7L	REV__nc|ENSG00000007341|Q8TDW4-7|ST7L	MSMS	GG20161007_CRH_Patient100_A02_02	2	452.2884704470634	2	452.286746	902.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.431	1	59.757	59.257	60.257	0.32553								0	0	0	0.42693	1	24905	24905		5.2307	2.9279	1		+		37379	14381	18558	18636	43426	43426					0.10376153662184606
VGVVAPVH	8	Unmodified	_VGVVAPVH_					0	0	0			REV__GRPEL2|p.G187V|1|0.49|ENSG00000164284|chr5:149351164-149351164|G/T|missense_variant	REV__GRPEL2|p.G187V|1|0.49|ENSG00000164284|chr5:149351164-149351164|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.4683105349541	1	777.46175	776.454474	2.6189	0.0020361	2.652	0.0020618	5.2709	0.004098	777.4635177115023	108.92	0.91776	109.08	108.67	109.58	0.15898					86	44	2	0	0	0	0.89176	1	47433	47433		0.79363	0	1	18832000	+		37380	14165	18559	18637	43427	43427					0.05730451905469636
VGVVARRR	8	Unmodified	_VGVVARRR_					0	0	0			REV__ENST00000444165.1_1_1:148853888-148854101:-|nuORF	REV__ENST00000444165.1_1_1:148853888-148854101:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8647949099541	3	304.866515	911.577717	-2.9487	-0.00089897	-2.2464	-0.00068487	-5.1952	-0.0015838	304.86570738366015	25.306	0.95262	25.306	24.858	25.811	0					61	30	4	0	0	0	0.89185	1	10587	10587		0.45834	0	1	4970700	+		37381	13099	18560	18638	43428	43428					0.11839128076599081
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.2110168337822	2	365.210704	728.406855	0.52302	0.00019101	2.1478	0.0007844	2.6708	0.00097541	365.2109988215021	22.865	0.21034	23.098	22.949	23.159	0.23306					15	6	3	0	0	0	0.89176	1	9541	9541		0.79363	0	1	995520	+		37382	13768	18561	18639	43429	43429					0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	365.1570007205009	2	365.210704	728.406855	0.52302	0.00019101	2.1478	0.0007844	2.6708	0.00097541	365.2109988215021	22.865	0.21034	23.098	22.949	23.159	0.23306					15	6	3	0	0	0	2.3239	1	9493	9493		0	0	1	995520	+		37383	13768	18561	18639	43430	43430					0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	365.5397521853447	2	365.210704	728.406855	0.24112	8.8058E-05	3.4362	0.0012549	3.6773	0.001343	365.2118324814995	23.702	0.58857	24.944	24.835	25.424	1.241					32	18	2	0	0	0	2.3239	1	9933	9933		0.79363	0	1	486410	+		37384	13768	18561	18639	43431	43431					0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.2117797732353	2	365.210704	728.406855	0.26118	9.5384E-05	2.8153	0.0010282	3.0764	0.0011235	365.21149453621285	25	0.51422	26.717	26.545	27.059	1.7167					27	16	3	0	0	0	0.89176	1	10548	10548		0.79363	0	1	1704000	+		37385	13768	18561	18639	43432	43432					0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	365.210704	728.406855	0.63265	0.00023105	4.154	0.0015171	4.7866	0.0017481	365.2122233982213	24.817	0.46288	25.06	24.925	25.388	0.24251	0.07723	0.00021776	NaN	0.79363	21	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	617920	+		37386	13768	18561	18639							0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	365.210704	728.406855	-0.02175	-7.9433E-06	2.319	0.00084694	2.2973	0.00083899	365.2113909106821	21.918	0.24037	23.095	22.96	23.201	1.177	-0.022123	-0.00017043	NaN	0.79363	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1266600	+		37387	13768	18561	18639							0.031787529146299676
VGVVEGLG	8	Unmodified	_VGVVEGLG_					0	0	0			REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	REV__ENST00000538915.2_1_17:12853006-12862275:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	365.210704	728.406855	0.19119	6.9826E-05	3.921	0.001432	4.1122	0.0015018	365.2120397135334	23.293	0.40159	24.944	24.808	25.209	1.6511	-0.038179	4.7614E-05	NaN	0.79363	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517970	+		37388	13768	18561	18639							0.031787529146299676
VGVVFIPV	8	Unmodified	_VGVVFIPV_					0	0	0			REV__ENSG00000132911|ENST00000255262|NMUR2	REV__ENSG00000132911|ENST00000255262|NMUR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2641479372978	2	415.262739	828.510926	4.4756	0.0018585	-1.388	-0.0005764	3.0875	0.0012821	415.26214402960363	86.759	0.56892	88.254	88.012	88.581	1.4953					42	18	3	0	0	0	0.88958	1	36609	36609		2.8892	0	1	3362900	+		37389	9863	18562	18640	43433	43433					0.08981079742125075
VGVVGEIS	8	Unmodified	_VGVVGEIS_					0	0	0		ENST00000589874.2_1_19:1432091-1433000:+|nuORF	ENST00000589874.2_1_19:1432091-1433000:+|nuORF	ENST00000589874.2_1_19:1432091-1433000:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2154418826103	2	380.215986	758.417419	0.4019	0.00015281	2.3971	0.00091143	2.799	0.0010642	380.2166902714722	26.274	0.48514	28.021	27.733	28.218	1.747					37	15	3	0	0	0	0.89176	1	11033	11033		0.79363	0	1	9115100			37390	7478	18563	18641	43434	43434					0.02854735569053446
VGVVKVPV	8	Unmodified	_VGVVKVPV_					0	0	0			REV__ENST00000534945.2_1_12:125834026-126068624:+|nuORF	REV__ENST00000534945.2_1_12:125834026-126068624:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.7690612673759	2	398.768189	795.521825	0.46819	0.0001867	3.3384	0.0013312	3.8066	0.0015179	398.76936856018426	16.479	0.37022	16.63	16.324	16.694	0.15093					25	13	2	0	0	0	0.89176	1	6862	6862		0.79363	0	1	3255400	+		37391	10101	18564	18642	43435	43435					0.11588482116417254
VGVVLGGG	8	Unmodified	_VGVVLGGG_					0	0	0		nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0052062869072	2	329.200139	656.385725	-0.0031838	-1.0481E-06	3.3632	0.0011072	3.36	0.0011061	329.2008899694816	20.374	0.28638	20.584	20.408	20.695	0.21024					13	8	2	0	0	0	2.3239	1	8406	8406		0	0	1	560440			37392	7840	18565	18643	43436	43436					0.043787876057649555
VGVVLGGG	8	Unmodified	_VGVVLGGG_					0	0	0		nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.0048095583916	2	329.200139	656.385725	-0.53819	-0.00017717	1.7522	0.00057683	1.214	0.00039966	329.20050837728525	19.248	0.37571	20.307	20.164	20.54	1.0585					16	11	2	0	0	0	2.3239	1	8054	8054		0	0	1	563720			37393	7840	18565	18643	43437	43437					0.043787876057649555
VGVVLGGG	8	Unmodified	_VGVVLGGG_					0	0	0		nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	nc|ENSG00000099849|Q02833-2|RASSF7	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	329.200139	656.385725	-0.21075	-6.9378E-05	0.41323	0.00013604	0.20249	6.6658E-05	329.19992415274356	18.811	0.30733	20.259	20.057	20.365	1.448	-0.12402	-0.00098405	NaN	0	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	491760			37394	7840	18565	18643							0.043787876057649555
VGVVLLLKP	9	Unmodified	_VGVVLLLKP_					0	0	0			REV__nc|ENSG00000101307|O00241-2|SIRPB1	REV__nc|ENSG00000101307|O00241-2|SIRPB1	MSMS	GG20161007_CRH_Patient100_A02_01	1	469.3281127810478	2	469.325871	936.637189	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.821	1	44.821	44.321	45.321	0								0	0	0	0.42693	1	18757	18757		2.0598	1.2661	1		+		37395	9029	18566	18644	43438	43438					0.16633586247405674
VGVVPALQ	8	Unmodified	_VGVVPALQ_					0	0	0		nc|ENSG00000133961|P49757-9|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;ENSG00000133961|ENST00000555238|NUMB	nc|ENSG00000133961|P49757-9|NUMB	nc|ENSG00000133961|P49757-9|NUMB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	391.7415344119072	2	391.742171	781.469789	0.21709	8.5043E-05	-2.9576	-0.0011586	-2.7405	-0.0010736	391.7407031817206	63.817	1.2871	63.817	63.24	64.527	0					54	40	2	0	0	0	0.89008	1	26505	26505		2.5775	1.7838	1	4876600			37396	2588	18567	18645	43439	43439					0.07031318702649969
VGVVPALQ	8	Unmodified	_VGVVPALQ_					0	0	0		nc|ENSG00000133961|P49757-9|NUMB;nc|ENSG00000133961|P49757-8|NUMB;nc|ENSG00000133961|P49757-7|NUMB;nc|ENSG00000133961|P49757-6|NUMB;nc|ENSG00000133961|P49757-5|NUMB;nc|ENSG00000133961|P49757-4|NUMB;nc|ENSG00000133961|P49757-2|NUMB;nc|ENSG00000133961|P49757-3|NUMB;ENSG00000133961|ENST00000555238|NUMB	nc|ENSG00000133961|P49757-9|NUMB	nc|ENSG00000133961|P49757-9|NUMB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	391.742171	781.469789	2.8313	0.0011092	-3.9378	-0.0015426	-1.1064	-0.00043344	391.74031244662143	62.254	1.0124	64.211	63.688	64.701	1.9571	0.22205	-0.00046237	NaN	2.5775	44	32	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2010400			37397	2588	18567	18645							0.07031318702649969
VGVVPPVD	8	Unmodified	_VGVVPPVD_					0	0	0		tr|A0A7D7A1N6|A0A7D7A1N6_9CLOTPrkAfamilyserineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05020PE=4SV=1	tr|A0A7D7A1N6|A0A7D7A1N6_9CLOTPrkAfamilyserineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05020PE=4SV=1	tr|A0A7D7A1N6|A0A7D7A1N6_9CLOTPrkAfamilyserineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_05020PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2849304080009	2	391.226354	780.438155	1.3272	0.00051925	-1.4298	-0.00055938	-0.10259	-4.0134E-05	391.2260632402311	66.538	1.2931	67.926	67.174	68.467	1.3887					78	41	3	0	0	0	2.3239	1	28085	28085		0.79363	0.79363	1	2904700			37398	17241	18568	18646	43440	43440					0.039153259487079595
VGVVRFHL	8	Unmodified	_VGVVRFHL_					0	0	0			REV__nc|ENSG00000142609|Q9C0B2|CFAP74	REV__nc|ENSG00000142609|Q9C0B2|CFAP74	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	464.5528747439384	2	463.782162	925.549771	1.1608	0.00053835	1.216	0.00056394	2.3767	0.0011023	463.7825480977191	20.952	0.29187	22.077	21.984	22.276	1.1254					14	9	2	0	0	0	2.3239	1	8806	8806		2.8892	0	1	878900	+		37399	10183	18569	18647	43441	43441					0.08401805096514181
VGVVRISVSV	10	Unmodified	_VGVVRISVSV_					0	0	0			REV__tr|A0A7D6VP63|A0A7D6VP63_9CLOTMetalABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17520PE=3SV=1	REV__tr|A0A7D6VP63|A0A7D6VP63_9CLOTMetalABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17520PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8205139040947	2	507.818941	1013.62333	2.5237	0.0012816	1.1709	0.00059461	3.6947	0.0018762	507.8190598044833	43.987	0.21726	45.341	45.222	45.439	1.3536					13	6	3	0	0	0	0.63205	1	18445	18445		21.537	0	1	1041100	+		37400	15350	18570	18648	43442	43442					0.1170630874833023
VGVVSLLL	8	Unmodified	_VGVVSLLL_					0	0	0		ENST00000459976.2_1_3:49002373-49005591:+|nuORF	ENST00000459976.2_1_3:49002373-49005591:+|nuORF	ENST00000459976.2_1_3:49002373-49005591:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	799.5327026247978	1	799.528767	798.521491	2.7541	0.002202	2.074	0.0016582	4.8281	0.0038602	799.5301549674688	101.16	0.17514	101.23	101.15	101.33	0.067009					10	5	2	0	0	0	0.89176	1	42359	42359		0.79363	0	1	5250600			37401	6664	18571	18649	43443	43443					0.11417062396583333
VGVVSVPG	8	Unmodified	_VGVVSVPG_					0	0	0			REV__TNXB|p.G3000Vfs*44|1|0.13|ENSG00000168477|chr6:32052786-32052787|-/A|frameshift_variant	REV__TNXB|p.G3000Vfs*44|1|0.13|ENSG00000168477|chr6:32052786-32052787|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4239990115166	1	713.419217	712.41194	1.4973	0.0010682	4.3747	0.003121	5.8721	0.0041892	713.4225023597247	37.828	0.17715	38.133	37.994	38.171	0.30497					11	6	2	0	0	0	0.89176	1	15881	15881		0.79363	0	1	1056700	+		37402	10911	18572	18650	43444	43444					0.044230567772387985
VGVVVVGF	8	Unmodified	_VGVVVVGF_					0	0	0			REV__BLVRA|p.E139Dfs*12|1|0.1|ENSG00000106605|chr7:43800528-43800529|-/TGGCCCACTGCAATTTCTGCCTCCCAGGTTCT|frameshift_variant	REV__BLVRA|p.E139Dfs*12|1|0.1|ENSG00000106605|chr7:43800528-43800529|-/TGGCCCACTGCAATTTCTGCCTCCCAGGTTCT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	388.1279785037041	2	388.239264	774.463976	-0.16512	-6.4107E-05	0.86639	0.00033637	0.70127	0.00027226	388.239206810662	40.664	0.49649	40.664	40.458	40.954	0					25	15	2	0	0	0	2.3239	1	17090	17090		2.8892	0	1	1745700	+		37403	8166	18573	18651	43445	43445					0.06772220190998723
VGVWRQRIG	9	Unmodified	_VGVWRQRIG_					0	0	0		tr|A0A553SLT5|A0A553SLT5_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21120PE=3SV=1	tr|A0A553SLT5|A0A553SLT5_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21120PE=3SV=1	tr|A0A553SLT5|A0A553SLT5_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_21120PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1647216677666	2	535.814525	1069.6145	1.8067	0.00096804	0.16895	9.0526E-05	1.9756	0.0010586	535.8143163830446	44.783	0.24734	44.783	44.625	44.872	0					13	7	2	0	0	0	0.11898	1	18714	18714		2.3027	0	1	515440			37404	16354	18574	18652	43446	43446					0.08247379902491048
VGVYAAGA	8	Unmodified	_VGVYAAGA_					0	0	0		SYT12|p.A36Dfs*66|1|0.1|ENSG00000173227|chr11:67034716-67034717|-/A|frameshift_variant;ENSG00000173227|ENST00000527043|SYT12	SYT12|p.A36Dfs*66|1|0.1|ENSG00000173227|chr11:67034716-67034717|-/A|frameshift_variant	SYT12|p.A36Dfs*66|1|0.1|ENSG00000173227|chr11:67034716-67034717|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	707.3718749880791	1	707.372266	706.36499	2.2725	0.0016075	-3.0902	-0.0021859	-0.81774	-0.00057845	707.3702441526128	62.942	0.37462	62.942	62.801	63.176	0					19	11	2	0	0	0	0.89176	2	26249	26249;26305		0.79363	0	1	870610			37405	4275	18575	18653	43447;43448	43447					6.197226082349516E-05
VGWDWSMYR	9	Unmodified	_VGWDWSMYR_					0	0	0			REV__ENST00000337318.7_2_10:126309523-126309826:-|nuORF	REV__ENST00000337318.7_2_10:126309523-126309826:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	400.0456725955009	3	400.514931	1198.52296	-0.39176	-0.00015691	2.506	0.0010037	2.1142	0.00084678	400.51686285978303	26.744	0.41749	26.744	26.535	26.953	0					17	13	2	0	0	0	0.11954	1	11134	11134		0.26902	0.1097	1	225980	+		37406	12473	18576	18654	43449	43449					-0.0683567157698235
VGWFFRLF	8	Unmodified	_VGWFFRLF_					0	0	0			REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|37|1|anti-sense	REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|37|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.1633788943291	2	536.292362	1070.57017	0.63492	0.0003405	1.5301	0.00082057	2.165	0.0011611	536.2934111709886	21.075	0.18217	22.65	22.53	22.712	1.5748					9	5	2	0	0	0	2.3239	1	8743	8743		0.79363	0.19213	1	96396	+		37407	14358	18577	18655	43450	43450					0.037709757563106905
VGWFLLLL	8	Unmodified	_VGWFLLLL_					0	0	0			REV__ENSG00000196611|ENST00000315274|MMP1	REV__ENSG00000196611|ENST00000315274|MMP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	960.5945922732353	1	960.591702	959.584425	1.7017	0.0016346	2.3106	0.0022195	4.0122	0.0038541	960.59315646192	78.784	0.36256	79.093	78.925	79.288	0.30932					29	11	3	0	0	0	0.89176	2	32911	32911;32960		0.79363	0	1	2903600	+		37408	11642	18578	18656	43451;43452	43451					0.1030162818460667
VGWGQKRV	8	Unmodified	_VGWGQKRV_					0	0	0			REV__ENST00000314412.6_1_9:139924917-139925142:-|nuORF	REV__ENST00000314412.6_1_9:139924917-139925142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2723266482353	2	465.269419	928.524284	3.3535	0.0015603	-0.14854	-6.9113E-05	3.205	0.0014912	465.26982952141486	93.216	0.45535	93.385	93.125	93.58	0.16835					34	13	3	0	0	0	0.88958	1	39084	39084		2.8892	0	1	1624000	+		37409	12381	18579	18657	43453	43453					0.05716330574091444
VGWGQKRV	8	Unmodified	_VGWGQKRV_					0	0	0			REV__ENST00000314412.6_1_9:139924917-139925142:-|nuORF	REV__ENST00000314412.6_1_9:139924917-139925142:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2717773318291	2	465.269419	928.524284	3.5714	0.0016616	0.97712	0.00045462	4.5485	0.0021163	465.2703424200765	91.93	0.38348	93.257	93.054	93.438	1.3269					30	11	3	0	0	0	0.88958	1	38739	38739		2.8892	0	1	1330400	+		37410	12381	18579	18657	43454	43454					0.05716330574091444
VGWGSVAR	8	Unmodified	_VGWGSVAR_					0	0	0			REV__nc|ENSG00000179846|Q17RQ9|NKPD1	REV__nc|ENSG00000179846|Q17RQ9|NKPD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	416.2282897830009	2	416.22722	830.439886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.309	1	22.486	21.986	22.986	1.177								0	0	0	1.0178	1	8896	8896		2.5775	0	1		+		37411	11285	18580	18658	43455	43455					0.017883797573290394
VGWHCRMLEFE	11	Unmodified	_VGWHCRMLEFE_					0	0	0			REV__ENST00000480260.1_1_3:183899436-183900037:+|nuORF	REV__ENST00000480260.1_1_3:183899436-183900037:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.5508911013603	3	469.549647	1405.62711	0.63174	0.00029663	1.7037	0.00079996	2.3354	0.0010966	469.55053029183546	16.977	0.30122	18.279	18.08	18.381	1.3023					19	9	3	0	0	0	1.0388	1	7086	7086		0.50596	0	1	1072700	+		37412	13345	18581	18659	43456	43456					-0.059477128117578104
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8834411501884	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1118	1	1.1118	0.6118	1.6118	0								0	0	0	0.66254	1	455	455		0.15932	0	1		+		37413	8943	18582	18660	43457	43457					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8829528689384	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4584	1	1.4584	0.95844	1.9584	0								0	0	0	0.66254	1	599	599		0.15932	0	1		+		37414	8943	18582	18660	43458	43458					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828613162041	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0421	1	2.0421	1.5421	2.5421	0								0	0	0	0.66254	1	837	837		0.15932	0	1		+		37415	8943	18582	18660	43459	43459					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828307986259	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.226	1	2.226	1.726	2.726	0								0	0	0	0.66254	1	913	913		0.15932	0	1		+		37416	8943	18582	18660	43460	43460					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8827392458916	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9856	1	2.9856	2.4856	3.4856	0								0	0	0	0.66254	1	1224	1224		0.15932	0	1		+		37417	8943	18582	18660	43461	43461					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8824951052666	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7246	1	4.7246	4.2246	5.2246	0								0	0	0	0.66254	1	1941	1941		0.15932	0	1		+		37418	8943	18582	18660	43462	43462					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8830749392509	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8283	1	4.8283	4.3283	5.3283	0								0	0	0	0.66254	1	1984	1984		0.15932	0	1		+		37419	8943	18582	18660	43463	43463					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828002810478	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2061	1	5.2061	4.7061	5.7061	0								0	0	0	0.66254	1	2138	2138		0.15932	0	1		+		37420	8943	18582	18660	43464	43464					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8823425173759	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7538	1	5.7538	5.2538	6.2538	0								0	0	0	0.66254	1	2364	2364		0.15932	0	1		+		37421	8943	18582	18660	43465	43465					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8826782107353	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4009	1	6.4009	5.9009	6.9009	0								0	0	0	0.66254	1	2628	2628		0.15932	0	1		+		37422	8943	18582	18660	43466	43466					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8826171755791	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8705	1	6.8705	6.3705	7.3705	0								0	0	0	0.66254	1	2823	2823		0.15932	0	1		+		37423	8943	18582	18660	43467	43467					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8829223513603	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5003	1	7.5003	7.0003	8.0003	0								0	0	0	0.66254	1	3083	3083		0.15932	0	1		+		37424	8943	18582	18660	43468	43468					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828002810478	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2308	1	8.2308	7.7308	8.7308	0								0	0	0	0.66254	1	3385	3385		0.15932	0	1		+		37425	8943	18582	18660	43469	43469					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8824645876884	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3607	1	9.3607	8.8607	9.8607	0								0	0	0	0.66254	1	3853	3853		0.15932	0	1		+		37426	8943	18582	18660	43470	43470					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8829528689384	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4747	1	9.4747	8.9747	9.9747	0								0	0	0	0.66254	1	3901	3901		0.15932	0	1		+		37427	8943	18582	18660	43471	43471					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8831970095634	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6096	1	9.6096	9.1096	10.11	0								0	0	0	0.66254	1	3956	3956		0.15932	0	1		+		37428	8943	18582	18660	43472	43472					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8831359744072	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.58	1	113.58	113.08	114.08	0								0	0	0	0.66254	1	49064	49064		0.15932	0	1		+		37429	8943	18582	18660	43473	43473					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828918337822	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.7	1	119.7	119.2	120.2	0								0	0	0	0.66254	1	51543	51543		0.15932	0	1		+		37430	8943	18582	18660	43474	43474					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825866580009	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2942	1	2.4167	1.9167	2.9167	0.12256								0	0	0	0.66254	1	945	945		0.15932	0	1		+		37431	8943	18582	18660	43475	43475					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827087283134	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.226	1	5.314	4.814	5.814	0.08803								0	0	0	0.66254	1	2159	2159		0.15932	0	1		+		37432	8943	18582	18660	43476	43476					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823119997978	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2706	1	9.3486	8.8486	9.8486	0.077971								0	0	0	0.66254	1	3841	3841		0.15932	0	1		+		37433	8943	18582	18660	43477	43477					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823425173759	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.385	1	10.463	9.9629	10.963	0.077971								0	0	0	0.66254	1	4307	4307		0.15932	0	1		+		37434	8943	18582	18660	43478	43478					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8821594119072	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.794	1	14.907	14.407	15.407	0.11295								0	0	0	0.66254	1	6139	6139		0.15932	0	1		+		37435	8943	18582	18660	43479	43479					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8828002810478	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.749	1	15.879	15.379	16.379	0.13022								0	0	0	0.66254	1	6535	6535		0.15932	0	1		+		37436	8943	18582	18660	43480	43480					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8820068240166	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.462	1	16.613	16.113	17.113	0.15093								0	0	0	0.66254	1	6832	6832		0.15932	0	1		+		37437	8943	18582	18660	43481	43481					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8829223513603	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.123	1	18.296	17.796	18.796	0.17285								0	0	0	0.66254	1	7522	7522		0.15932	0	1		+		37438	8943	18582	18660	43482	43482					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8830139040947	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.325	1	20.535	20.035	21.035	0.21024								0	0	0	0.66254	1	8444	8444		0.15932	0	1		+		37439	8943	18582	18660	43483	43483					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827392458916	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.715	1	23.957	23.457	24.457	0.24251								0	0	0	0.66254	1	9890	9890		0.15932	0	1		+		37440	8943	18582	18660	43484	43484					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8831359744072	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.189	1	25.441	24.941	25.941	0.25197								0	0	0	0.66254	1	10516	10516		0.15932	0	1		+		37441	8943	18582	18660	43485	43485					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8823119997978	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5168	1	3.151	2.651	3.651	0.63417								0	0	0	0.66254	1	1036	1036		0.15932	0	1		+		37442	8943	18582	18660	43486	43486					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8822509646416	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0583	1	5.6796	5.1796	6.1796	0.62127								0	0	0	0.66254	1	2088	2088		0.15932	0	1		+		37443	8943	18582	18660	43487	43487					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824035525322	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.511	1	6.1322	5.6322	6.6322	0.62127								0	0	0	0.66254	1	2276	2276		0.15932	0	1		+		37444	8943	18582	18660	43488	43488					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8825256228447	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9351	1	8.5622	8.0622	9.0622	0.62713								0	0	0	0.66254	1	3285	3285		0.15932	0	1		+		37445	8943	18582	18660	43489	43489					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8826476931572	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.151	1	15.92	15.42	16.42	0.76937								0	0	0	0.66254	1	6296	6296		0.15932	0	1		+		37446	8943	18582	18660	43490	43490					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8831664919853	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.711	1	17.609	17.109	18.109	0.89794								0	0	0	0.66254	1	6951	6951		0.15932	0	1		+		37447	8943	18582	18660	43491	43491					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8828613162041	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.044	1	17.942	17.442	18.442	0.89794								0	0	0	0.66254	1	7094	7094		0.15932	0	1		+		37448	8943	18582	18660	43492	43492					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8833801150322	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.197	1	18.095	17.595	18.595	0.89794								0	0	0	0.66254	1	7157	7157		0.15932	0	1		+		37449	8943	18582	18660	43493	43493					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824340701103	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.301	1	20.36	19.86	20.86	1.0585								0	0	0	0.66254	1	8041	8041		0.15932	0	1		+		37450	8943	18582	18660	43494	43494					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8828002810478	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.304	1	24.518	24.018	25.018	1.2145								0	0	0	0.66254	1	9741	9741		0.15932	0	1		+		37451	8943	18582	18660	43495	43495					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8822204470634	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.383	1	14.211	13.711	14.711	0.82789								0	0	0	0.66254	1	5549	5549		0.15932	0	1		+		37452	8943	18582	18660	43496	43496					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8823425173759	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.834	1	20.282	19.782	20.782	1.448								0	0	0	0.66254	1	7831	7831		0.15932	0	1		+		37453	8943	18582	18660	43497	43497					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8830139040947	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.204	1	20.728	20.228	21.228	1.5237								0	0	0	0.66254	1	7983	7983		0.15932	0	1		+		37454	8943	18582	18660	43498	43498					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828613162041	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.683	1	25.334	24.834	25.834	1.6511								0	0	0	0.66254	1	9890	9890		0.15932	0	1		+		37455	8943	18582	18660	43499	43499					-0.012047644693438997
VGWLWTYFKC	10	Unmodified	_VGWLWTYFKC_					0	0	0			REV__ENSG00000099194|ENST00000370355|SCD	REV__ENSG00000099194|ENST00000370355|SCD	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8832275271416	3	434.882843	1301.6267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.801	1	25.486	24.986	25.986	1.6845								0	0	0	0.66254	1	9939	9939		0.15932	0	1		+		37456	8943	18582	18660	43500	43500					-0.012047644693438997
VGWQIQHLI	9	Unmodified	_VGWQIQHLI_					0	0	0		ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.8114501833916	2	547.311284	1092.60801	1.4887	0.00081477	-1.8328	-0.0010031	-0.34417	-0.00018837	547.8122733412938	77.72	0.37135	77.72	77.502	77.873	0					25	11	3	0	0	0	0.75267	1	32321	32321		5.2307	0.47466	1	1054900			37457	6016	18583	18661	43501	43501					0.06541441951139859
VGWQIQHLI	9	Unmodified	_VGWQIQHLI_					0	0	0		ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3126098513603	2	547.311284	1092.60801	1.4763	0.00080799	1.4533	0.00079542	2.9296	0.0016034	547.3117614002736	78.206	0.34496	78.206	78.032	78.377	0					18	10	3	0	0	0	0.75267	1	32553	32553		5.2307	0	1	475230			37458	6016	18583	18661	43502	43502					0.06541441951139859
VGWQIQHLI	9	Unmodified	_VGWQIQHLI_					0	0	0		ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.8127319216728	2	547.311284	1092.60801	2.022	0.0011067	-3.6467	-0.0019959	-1.6246	-0.00088917	547.8110347531781	77.273	0.31313	77.589	77.387	77.701	0.31653					24	9	3	0	0	0	0.75267	1	32287	32287		5.2307	0.47466	1	1322500			37459	6016	18583	18661	43503	43503					0.06541441951139859
VGWQIQHLI	9	Unmodified	_VGWQIQHLI_					0	0	0		ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	547.311284	1092.60801	1.9013	0.0010406	0.79258	0.00043379	2.6939	0.0014744	547.3118855515152	77.761	0.34668	78.077	77.92	78.266	0.31653	-0.0023916	-0.00025307	NaN	5.2307	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	434100			37460	6016	18583	18661							0.06541441951139859
VGWQIQHLI	9	Unmodified	_VGWQIQHLI_					0	0	0		ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	ENST00000359035.4_1_10:135126205-135126367:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	547.311284	1092.60801	2.7322	0.0014954	0.50531	0.00027656	3.2375	0.0017719	547.3116482240227	76.188	0.37706	77.956	77.782	78.159	1.7672	-0.12386	-0.00056752	NaN	5.2307	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836540			37461	6016	18583	18661							0.06541441951139859
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887206912041	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1675	1	3.1675	2.6675	3.6675	0								0	0	0	0.66254	1	1300	1300		0.15932	0	1		+		37462	8548	18584	18662	43504	43504					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883544802666	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6053	1	6.6053	6.1053	7.1053	0								0	0	0	0.66254	1	2713	2713		0.15932	0	1		+		37463	8548	18584	18662	43505	43505					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6318	1	8.6318	8.1318	9.1318	0								0	0	0	0.66254	1	3551	3551		0.15932	0	1		+		37464	8548	18584	18662	43506	43506					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.663	1	9.663	9.163	10.163	0								0	0	0	0.66254	1	3979	3979		0.15932	0	1		+		37465	8548	18584	18662	43507	43507					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882018923759	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.352	1	10.352	9.8515	10.852	0								0	0	0	0.66218	1	4268	4268		0.77653	0.078866	1		+		37466	8548	18584	18662	43508	43508					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.478	1	10.478	9.9781	10.978	0								0	0	0	0.66254	1	4320	4320		0.15932	0	1		+		37467	8548	18584	18662	43509	43509					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886291384697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.843	1	10.843	10.343	11.343	0								0	0	0	0.66218	1	4475	4475		0.77653	0	1		+		37468	8548	18584	18662	43510	43510					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882324099541	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.03	1	11.03	10.53	11.53	0								0	0	0	0.66254	1	4554	4554		0.15932	0	1		+		37469	8548	18584	18662	43511	43511					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.764	1	16.764	16.264	17.264	0								0	0	0	0.66254	1	6958	6958		0.15932	0	1		+		37470	8548	18584	18662	43512	43512					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882934451103	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.036	1	17.036	16.536	17.536	0								0	0	0	0.66218	1	7071	7071		0.77653	0.078866	1		+		37471	8548	18584	18662	43513	43513					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.474	1	17.474	16.974	17.974	0								0	0	0	0.66218	1	7254	7254		0.77653	0.078866	1		+		37472	8548	18584	18662	43514	43514					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884155154228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.591	1	18.591	18.091	19.091	0								0	0	0	0.66254	1	7727	7727		0.15932	0	1		+		37473	8548	18584	18662	43515	43515					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884155154228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.721	1	18.721	18.221	19.221	0								0	0	0	0.66218	1	7782	7782		0.77653	0.27058	1		+		37474	8548	18584	18662	43516	43516					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889037966728	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.485	1	20.485	19.985	20.985	0								0	0	0	0.66254	1	8516	8516		0.15932	0	1		+		37475	8548	18584	18662	43517	43517					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.879	1	20.879	20.379	21.379	0								0	0	0	0.66254	1	8680	8680		0.15932	0	1		+		37476	8548	18584	18662	43518	43518					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888122439384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.259	1	21.259	20.759	21.759	0								0	0	0	0.66254	1	8839	8839		0.15932	0	1		+		37477	8548	18584	18662	43519	43519					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.452	1	21.452	20.952	21.952	0								0	0	0	0.66254	1	8920	8920		0.15932	0	1		+		37478	8548	18584	18662	43520	43520					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.576	1	21.576	21.076	22.076	0								0	0	0	0.66254	1	8972	8972		0.15932	0	1		+		37479	8548	18584	18662	43521	43521					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.169	1	25.169	24.669	25.669	0								0	0	0	0.66218	1	10503	10503		0.77653	0	1		+		37480	8548	18584	18662	43522	43522					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889953494072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.759	1	25.759	25.259	26.259	0								0	0	0	0.66254	1	10752	10752		0.15932	0	1		+		37481	8548	18584	18662	43523	43523					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889953494072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.903	1	25.903	25.403	26.403	0								0	0	0	0.66218	1	10813	10813		0.77653	0.27058	1		+		37482	8548	18584	18662	43524	43524					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.476	1	27.476	26.976	27.976	0								0	0	0	0.66254	1	11491	11491		0.15932	0	1		+		37483	8548	18584	18662	43525	43525					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.487	1	28.487	27.987	28.987	0								0	0	0	0.66254	1	11920	11920		0.15932	0	1		+		37484	8548	18584	18662	43526	43526					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889953494072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.601	1	28.601	28.101	29.101	0								0	0	0	0.66254	1	11968	11968		0.15932	0	1		+		37485	8548	18584	18662	43527	43527					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886291384697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.725	1	28.725	28.225	29.225	0								0	0	0	0.66254	1	12021	12021		0.15932	0	1		+		37486	8548	18584	18662	43528	43528					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.078	1	30.078	29.578	30.578	0								0	0	0	0.66254	1	12594	12594		0.15932	0	1		+		37487	8548	18584	18662	43529	43529					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8889648318291	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.263	1	32.263	31.763	32.763	0								0	0	0	0.66254	1	13516	13516		0.15932	0	1		+		37488	8548	18584	18662	43530	43530					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.301	1	38.301	37.801	38.801	0								0	0	0	0.66254	1	16055	16055		0.15932	0	1		+		37489	8548	18584	18662	43531	43531					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.997	1	42.997	42.497	43.497	0								0	0	0	0.66254	1	17998	17998		0.15932	0	1		+		37490	8548	18584	18662	43532	43532					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.06	1	119.06	118.56	119.56	0								0	0	0	0.66254	1	51283	51283		0.15932	0	1		+		37491	8548	18584	18662	43533	43533					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.125	1	3.2476	2.7476	3.7476	0.12256								0	0	0	0.66254	1	1290	1290		0.15932	0	1		+		37492	8548	18584	18662	43534	43534					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884460330009	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6227	1	9.7006	9.2006	10.201	0.077971								0	0	0	0.66254	1	3988	3988		0.15932	0	1		+		37493	8548	18584	18662	43535	43535					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884155154228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7543	1	9.8323	9.3323	10.332	0.077971								0	0	0	0.66218	1	4042	4042		0.77653	0.27058	1		+		37494	8548	18584	18662	43536	43536					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882018923759	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8719	1	9.9499	9.4499	10.45	0.077971								0	0	0	0.66254	1	4091	4091		0.15932	0	1		+		37495	8548	18584	18662	43537	43537					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883849978447	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.181	1	10.259	9.7589	10.759	0.077971								0	0	0	0.66254	1	4221	4221		0.15932	0	1		+		37496	8548	18584	18662	43538	43538					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881103396416	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.311	1	10.389	9.8885	10.889	0.077971								0	0	0	0.66218	1	4275	4275		0.77653	0.27058	1		+		37497	8548	18584	18662	43539	43539					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882324099541	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.428	1	10.509	10.009	11.009	0.080954								0	0	0	0.66254	1	4325	4325		0.15932	0	1		+		37498	8548	18584	18662	43540	43540					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8879577517509	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.557	1	10.639	10.139	11.139	0.082325								0	0	0	0.66218	1	4379	4379		0.77653	0.27058	1		+		37499	8548	18584	18662	43541	43541					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8882934451103	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.664	1	10.746	10.246	11.246	0.082325								0	0	0	0.66254	1	4425	4425		0.15932	0	1		+		37500	8548	18584	18662	43542	43542					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.924	1	11.006	10.506	11.506	0.082325								0	0	0	0.66218	1	4532	4532		0.77653	0.27058	1		+		37501	8548	18584	18662	43543	43543					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.026	1	11.109	10.609	11.609	0.082325								0	0	0	0.66254	1	4574	4574		0.15932	0	1		+		37502	8548	18584	18662	43544	43544					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8883239626884	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.144	1	11.226	10.726	11.726	0.082325								0	0	0	0.66254	1	4623	4623		0.15932	0	1		+		37503	8548	18584	18662	43545	43545					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.255	1	11.337	10.837	11.837	0.082325								0	0	0	0.66254	1	4669	4669		0.15932	0	1		+		37504	8548	18584	18662	43546	43546					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.382	1	11.464	10.964	11.964	0.082325								0	0	0	0.66218	1	4722	4722		0.77653	0.27058	1		+		37505	8548	18584	18662	43547	43547					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885681033134	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.036	1	14.149	13.649	14.649	0.11206								0	0	0	0.66254	1	5824	5824		0.15932	0	1		+		37506	8548	18584	18662	43548	43548					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.556	1	15.686	15.186	16.186	0.13022								0	0	0	0.66254	1	6455	6455		0.15932	0	1		+		37507	8548	18584	18662	43549	43549					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.868	1	15.998	15.498	16.498	0.13022								0	0	0	0.66254	1	6585	6585		0.15932	0	1		+		37508	8548	18584	18662	43550	43550					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.027	1	16.157	15.657	16.657	0.13022								0	0	0	0.66254	1	6653	6653		0.15932	0	1		+		37509	8548	18584	18662	43551	43551					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8881103396416	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.477	1	16.628	16.128	17.128	0.15093								0	0	0	0.66218	1	6838	6838		0.77653	0.27058	1		+		37510	8548	18584	18662	43552	43552					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8878967165947	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.624	1	16.775	16.275	17.275	0.15093								0	0	0	0.66254	1	6898	6898		0.15932	0	1		+		37511	8548	18584	18662	43553	43553					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8874999880791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.735	1	16.886	16.386	17.386	0.15093								0	0	0	0.66222	1	6945	6945		0.69767	0.19171	1		+		37512	8548	18584	18662	43554	43554					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8878051638603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.85	1	17.001	16.501	17.501	0.15093								0	0	0	0.66254	1	6992	6992		0.15932	0	1		+		37513	8548	18584	18662	43555	43555					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8878051638603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.011	1	17.162	16.662	17.662	0.15093								0	0	0	0.66254	1	7057	7057		0.15932	0	1		+		37514	8548	18584	18662	43556	43556					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.216	1	18.389	17.889	18.889	0.17285								0	0	0	0.66254	1	7561	7561		0.15932	0	1		+		37515	8548	18584	18662	43557	43557					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.496	1	18.669	18.169	19.169	0.17285								0	0	0	0.66254	1	7678	7678		0.15932	0	1		+		37516	8548	18584	18662	43558	43558					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8888732790947	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.201	1	19.394	18.894	19.894	0.19342								0	0	0	0.66218	1	7973	7973		0.77653	0.27058	1		+		37517	8548	18584	18662	43559	43559					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.409	1	19.603	19.103	20.103	0.19342								0	0	0	0.66254	1	8062	8062		0.15932	0	1		+		37518	8548	18584	18662	43560	43560					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884460330009	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.564	1	19.757	19.257	20.257	0.19342								0	0	0	0.66254	1	8128	8128		0.15932	0	1		+		37519	8548	18584	18662	43561	43561					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889343142509	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.684	1	19.878	19.378	20.378	0.19342								0	0	0	0.66254	1	8178	8178		0.15932	0	1		+		37520	8548	18584	18662	43562	43562					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887512087822	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.811	1	20.004	19.504	20.504	0.19342								0	0	0	0.66254	1	8231	8231		0.15932	0	1		+		37521	8548	18584	18662	43563	43563					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.922	1	20.115	19.615	20.615	0.19342								0	0	0	0.66254	1	8278	8278		0.15932	0	1		+		37522	8548	18584	18662	43564	43564					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.175	1	20.385	19.885	20.885	0.21024								0	0	0	0.66254	1	8382	8382		0.15932	0	1		+		37523	8548	18584	18662	43565	43565					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886291384697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.414	1	21.637	21.137	22.137	0.223								0	0	0	0.66254	1	8901	8901		0.15932	0	1		+		37524	8548	18584	18662	43566	43566					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.776	1	21.999	21.499	22.499	0.223								0	0	0	0.66254	1	9058	9058		0.15932	0	1		+		37525	8548	18584	18662	43567	43567					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8880187869072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.191	1	22.414	21.914	22.914	0.223								0	0	0	0.66254	1	9240	9240		0.15932	0	1		+		37526	8548	18584	18662	43568	43568					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889037966728	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.278	1	25.53	25.03	26.03	0.25197								0	0	0	0.66218	1	10553	10553		0.77653	0.27058	1		+		37527	8548	18584	18662	43569	43569					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889953494072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.772	1	26.024	25.524	26.524	0.25197								0	0	0	0.66254	1	10762	10762		0.15932	0	1		+		37528	8548	18584	18662	43570	43570					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8890258669853	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.308	1	28.579	28.079	29.079	0.27119								0	0	0	0.66254	1	11841	11841		0.15932	0	1		+		37529	8548	18584	18662	43571	43571					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8892394900322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.565	1	28.844	28.344	29.344	0.2793								0	0	0	0.66218	1	11951	11951		0.77653	0.27058	1		+		37530	8548	18584	18662	43572	43572					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8889343142509	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.709	1	28.989	28.489	29.489	0.2793								0	0	0	0.66254	1	12012	12012		0.15932	0	1		+		37531	8548	18584	18662	43573	43573					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.436	1	34.733	34.233	35.233	0.29701								0	0	0	0.66254	1	14461	14461		0.15932	0	1		+		37532	8548	18584	18662	43574	43574					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893310427666	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.483	1	40.796	40.296	41.296	0.31263								0	0	0	0.66254	1	17019	17019		0.15932	0	1		+		37533	8548	18584	18662	43575	43575					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891479372978	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.255	1	93.423	92.923	93.923	0.16835								0	0	0	0.66254	1	39042	39042		0.15932	0	1		+		37534	8548	18584	18662	43576	43576					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893920779228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.78	1	113.82	113.32	114.32	0.044189								0	0	0	0.66254	1	48995	48995		0.15932	0	1		+		37535	8548	18584	18662	43577	43577					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881713747978	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.121	1	10.772	10.272	11.272	0.65058								0	0	0	0.66218	1	4210	4210		0.77653	0.27058	1		+		37536	8548	18584	18662	43578	43578					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881103396416	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.248	1	10.899	10.399	11.399	0.65058								0	0	0	0.66218	1	4264	4264		0.77653	0.27058	1		+		37537	8548	18584	18662	43579	43579					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880187869072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.372	1	11.022	10.522	11.522	0.65058								0	0	0	0.66254	1	4314	4314		0.15932	0	1		+		37538	8548	18584	18662	43580	43580					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882934451103	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.615	1	11.284	10.784	11.784	0.66934								0	0	0	0.66218	1	4415	4415		0.77653	0.078866	1		+		37539	8548	18584	18662	43581	43581					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880187869072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.751	1	11.421	10.921	11.921	0.66934								0	0	0	0.66254	1	4471	4471		0.15932	0	1		+		37540	8548	18584	18662	43582	43582					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882324099541	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.877	1	11.546	11.046	12.046	0.66934								0	0	0	0.66218	1	4522	4522		0.77653	0.27058	1		+		37541	8548	18584	18662	43583	43583					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8881408572197	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.168	1	11.837	11.337	12.337	0.66934								0	0	0	0.66254	1	4641	4641		0.15932	0	1		+		37542	8548	18584	18662	43584	43584					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878356814384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.294	1	11.963	11.463	12.463	0.66934								0	0	0	0.66218	1	4693	4693		0.77653	0.078866	1		+		37543	8548	18584	18662	43585	43585					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.654	1	13.348	12.848	13.848	0.69396								0	0	0	0.66218	1	5255	5255		0.77653	0	1		+		37544	8548	18584	18662	43586	43586					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.036	1	13.762	13.262	14.262	0.72639								0	0	0	0.66254	1	5412	5412		0.15932	0	1		+		37545	8548	18584	18662	43587	43587					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.666	1	14.392	13.892	14.892	0.72639								0	0	0	0.66254	1	5675	5675		0.15932	0	1		+		37546	8548	18584	18662	43588	43588					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885681033134	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.941	1	14.667	14.167	15.167	0.72639								0	0	0	0.66218	1	5790	5790		0.77653	0	1		+		37547	8548	18584	18662	43589	43589					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878967165947	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.253	1	17.08	16.58	17.58	0.82643								0	0	0	0.66254	1	6757	6757		0.15932	0	1		+		37548	8548	18584	18662	43590	43590					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.635	1	18.58	18.08	19.08	0.94574								0	0	0	0.66254	1	7340	7340		0.15932	0	1		+		37549	8548	18584	18662	43591	43591					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882324099541	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.741	1	18.72	18.22	19.22	0.97922								0	0	0	0.66254	1	7385	7385		0.15932	0	1		+		37550	8548	18584	18662	43592	43592					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885681033134	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.966	1	18.945	18.445	19.445	0.97922								0	0	0	0.66254	1	7479	7479		0.15932	0	1		+		37551	8548	18584	18662	43593	43593					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880798220634	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.527	1	19.507	19.007	20.007	0.97922								0	0	0	0.66254	1	7717	7717		0.15932	0	1		+		37552	8548	18584	18662	43594	43594					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888732790947	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.854	1	19.871	19.371	20.371	1.0168								0	0	0	0.66254	1	7856	7856		0.15932	0	1		+		37553	8548	18584	18662	43595	43595					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888122439384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.622	1	20.681	20.181	21.181	1.0585								0	0	0	0.66254	1	8172	8172		0.15932	0	1		+		37554	8548	18584	18662	43596	43596					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889953494072	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.746	1	20.805	20.305	21.305	1.0585								0	0	0	0.66254	1	8223	8223		0.15932	0	1		+		37555	8548	18584	18662	43597	43597					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8887817263603	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.892	1	20.951	20.451	21.451	1.0585								0	0	0	0.66254	1	8283	8283		0.15932	0	1		+		37556	8548	18584	18662	43598	43598					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889037966728	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.75	1	21.876	21.376	22.376	1.1254								0	0	0	0.66254	1	8651	8651		0.15932	0	1		+		37557	8548	18584	18662	43599	43599					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884155154228	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.018	1	22.143	21.643	22.643	1.1254								0	0	0	0.66254	1	8767	8767		0.15932	0	1		+		37558	8548	18584	18662	43600	43600					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880493044853	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.27	1	22.423	21.923	22.923	1.1535								0	0	0	0.66254	1	8879	8879		0.15932	0	1		+		37559	8548	18584	18662	43601	43601					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.398	1	22.575	22.075	23.075	1.177								0	0	0	0.66254	1	8934	8934		0.15932	0	1		+		37560	8548	18584	18662	43602	43602					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882018923759	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.823	1	27.082	26.582	27.582	1.2594								0	0	0	0.66254	1	10815	10815		0.15932	0	1		+		37561	8548	18584	18662	43603	43603					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8882324099541	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.643	1	27.914	27.414	28.414	1.2715								0	0	0	0.66254	1	11157	11157		0.15932	0	1		+		37562	8548	18584	18662	43604	43604					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.293	1	28.564	28.064	29.064	1.2715								0	0	0	0.66254	1	11436	11436		0.15932	0	1		+		37563	8548	18584	18662	43605	43605					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8893310427666	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.418	1	28.697	28.197	29.197	1.2789								0	0	0	0.66254	1	11489	11489		0.15932	0	1		+		37564	8548	18584	18662	43606	43606					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8890258669853	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.854	1	29.133	28.633	29.633	1.2789								0	0	0	0.66254	1	11672	11672		0.15932	0	1		+		37565	8548	18584	18662	43607	43607					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885070681572	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.98	1	29.259	28.759	29.759	1.2789								0	0	0	0.66254	1	11725	11725		0.15932	0	1		+		37566	8548	18584	18662	43608	43608					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8883239626884	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.776	1	30.059	29.559	30.559	1.2825								0	0	0	0.66254	1	12066	12066		0.15932	0	1		+		37567	8548	18584	18662	43609	43609					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8889343142509	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.219	1	32.5	32	33	1.2813								0	0	0	0.66254	1	13097	13097		0.15932	0	1		+		37568	8548	18584	18662	43610	43610					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886291384697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.872	1	6.6028	6.1028	7.1028	0.73074								0	0	0	0.66254	1	2435	2435		0.15932	0	1		+		37569	8548	18584	18662	43611	43611					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881713747978	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4992	1	9.2337	8.7337	9.7337	0.73452								0	0	0	0.66254	1	3533	3533		0.15932	0	1		+		37570	8548	18584	18662	43612	43612					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881103396416	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5211	1	10.266	9.7657	10.766	0.74462								0	0	0	0.66254	1	3962	3962		0.15932	0	1		+		37571	8548	18584	18662	43613	43613					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880798220634	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6218	1	10.366	9.8664	10.866	0.74462								0	0	0	0.66254	1	4005	4005		0.15932	0	1		+		37572	8548	18584	18662	43614	43614					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880798220634	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8643	1	10.609	10.109	11.109	0.74462								0	0	0	0.66218	1	4107	4107		0.77653	0.078866	1		+		37573	8548	18584	18662	43615	43615					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9902	1	10.735	10.235	11.235	0.74462								0	0	0	0.66254	1	4159	4159		0.15932	0	1		+		37574	8548	18584	18662	43616	43616					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882629275322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.253	1	10.998	10.498	11.498	0.74462								0	0	0	0.66254	1	4266	4266		0.15932	0	1		+		37575	8548	18584	18662	43617	43617					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.94	1	11.701	11.201	12.201	0.76165								0	0	0	0.66254	1	4546	4546		0.15932	0	1		+		37576	8548	18584	18662	43618	43618					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.072	1	11.833	11.333	12.333	0.76165								0	0	0	0.66254	1	4600	4600		0.15932	0	1		+		37577	8548	18584	18662	43619	43619					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882629275322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.186	1	11.947	11.447	12.447	0.76165								0	0	0	0.66254	1	4647	4647		0.15932	0	1		+		37578	8548	18584	18662	43620	43620					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.497	1	13.285	12.785	13.785	0.78751								0	0	0	0.66218	1	5186	5186		0.77653	0	1		+		37579	8548	18584	18662	43621	43621					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.293	1	14.121	13.621	14.621	0.82789								0	0	0	0.66254	1	5512	5512		0.15932	0	1		+		37580	8548	18584	18662	43622	43622					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883849978447	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.921	1	15.818	15.318	16.318	0.89664								0	0	0	0.66254	1	6191	6191		0.15932	0	1		+		37581	8548	18584	18662	43623	43623					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886901736259	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.666	1	18.968	18.468	19.468	1.3023								0	0	0	0.66254	1	7338	7338		0.15932	0	1		+		37582	8548	18584	18662	43624	43624					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.955	1	19.403	18.903	19.903	1.448								0	0	0	0.66254	1	7461	7461		0.15932	0	1		+		37583	8548	18584	18662	43625	43625					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885681033134	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.484	1	19.932	19.432	20.432	1.448								0	0	0	0.66254	1	7688	7688		0.15932	0	1		+		37584	8548	18584	18662	43626	43626					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888122439384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.262	1	20.786	20.286	21.286	1.5237								0	0	0	0.66254	1	8007	8007		0.15932	0	1		+		37585	8548	18584	18662	43627	43627					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8889343142509	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.402	1	20.926	20.426	21.426	1.5237								0	0	0	0.66254	1	8063	8063		0.15932	0	1		+		37586	8548	18584	18662	43628	43628					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886291384697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.958	1	21.482	20.982	21.982	1.5237								0	0	0	0.66254	1	8297	8297		0.15932	0	1		+		37587	8548	18584	18662	43629	43629					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888122439384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.106	1	21.629	21.129	22.129	1.5237								0	0	0	0.66254	1	8359	8359		0.15932	0	1		+		37588	8548	18584	18662	43630	43630					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882018923759	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.588	1	22.162	21.662	22.662	1.5748								0	0	0	0.66254	1	8566	8566		0.15932	0	1		+		37589	8548	18584	18662	43631	43631					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882629275322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.889	1	22.464	21.964	22.964	1.5748								0	0	0	0.66254	1	8700	8700		0.15932	0	1		+		37590	8548	18584	18662	43632	43632					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.891	1	26.575	26.075	27.075	1.6845								0	0	0	0.66254	1	10402	10402		0.15932	0	1		+		37591	8548	18584	18662	43633	43633					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887512087822	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.045	1	26.762	26.262	27.262	1.7167								0	0	0	0.66254	1	10467	10467		0.15932	0	1		+		37592	8548	18584	18662	43634	43634					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.164	1	26.88	26.38	27.38	1.7167								0	0	0	0.66254	1	10519	10519		0.15932	0	1		+		37593	8548	18584	18662	43635	43635					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8882629275322	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.653	1	27.369	26.869	27.869	1.7167								0	0	0	0.66254	1	10726	10726		0.15932	0	1		+		37594	8548	18584	18662	43636	43636					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8879272341728	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.17	1	27.887	27.387	28.387	1.7167								0	0	0	0.66254	1	10946	10946		0.15932	0	1		+		37595	8548	18584	18662	43637	43637					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8887512087822	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.822	1	28.569	28.069	29.069	1.747								0	0	0	0.66254	1	11224	11224		0.15932	0	1		+		37596	8548	18584	18662	43638	43638					0.008538634428759906
VGWRLHAWEH	10	Unmodified	_VGWRLHAWEH_					0	0	0			REV__ENSG00000016490|ENST00000394711|CLCA1	REV__ENSG00000016490|ENST00000394711|CLCA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.29	1	30.065	29.565	30.565	1.7754								0	0	0	0.66254	1	11844	11844		0.15932	0	1		+		37597	8548	18584	18662	43639	43639					0.008538634428759906
VGWSSRRNLDT	11	Unmodified	_VGWSSRRNLDT_					0	0	0		ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885681033134	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.596	1	10.596	10.096	11.096	0								0	0	0	0.63775	1	4370	4370		0.50596	0.34663	1				37598	6901	18585	18663	43640	43640					0.014409171638817497
VGWSSRRNLDT	11	Unmodified	_VGWSSRRNLDT_					0	0	0		ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8896972537041	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.421	1	42.421	41.921	42.921	0								0	0	0	0.63775	1	17754	17754		0.50596	0.051438	1				37599	6901	18585	18663	43641	43641					0.014409171638817497
VGWSSRRNLDT	11	Unmodified	_VGWSSRRNLDT_					0	0	0		ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886901736259	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.872	1	18.045	17.545	18.545	0.17285								0	0	0	0.63775	1	7418	7418		0.50596	0.27011	1				37600	6901	18585	18663	43642	43642					0.014409171638817497
VGWSSRRNLDT	11	Unmodified	_VGWSSRRNLDT_					0	0	0		ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	ENST00000490021.2_1_1:110230443-110251195:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8883544802666	3	430.889825	1289.64765	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.67	1	41.532	41.032	42.032	1.8624								0	0	0	0.63775	1	16633	16633		0.50596	0.23694	1				37601	6901	18585	18663	43643	43643					0.014409171638817497
VGWWVRNTR	9	Unmodified	_VGWWVRNTR_					0	0	0		nc|ENSG00000172869|Q9Y485|DMXL1;ENSG00000172869|ENST00000539542|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	nc|ENSG00000172869|Q9Y485|DMXL1	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3184692263603	2	587.317432	1172.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.674	1	71.674	71.174	72.174	0								0	0	0	0.42693	1	29848	29848		2.0598	0	1				37602	4257	18586	18664	43644	43644					0.04090478414173049
VGYAHEIK	8	Unmodified	_VGYAHEIK_					0	0	0		tr|A0A553SMX2|A0A553SMX2_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23355PE=4SV=1	tr|A0A553SMX2|A0A553SMX2_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23355PE=4SV=1	tr|A0A553SMX2|A0A553SMX2_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23355PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1672546267509	3	306.167749	915.481417	-1.6348	-0.00050054	1.0935	0.00033478	-0.54139	-0.00016576	306.1681097994652	10.921	0.28643	11.59	11.415	11.702	0.66934					12	8	2	0	0	0	0.88055	1	4551	4551		6.2058	0.9089	1	353980			37603	16398	18587	18665	43645	43645					0.02029515725996589
VGYAVALA	8	Unmodified	_VGYAVALA_					0	0	0			REV__ENSG00000130758|ENST00000253055|MAP3K10	REV__ENSG00000130758|ENST00000253055|MAP3K10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	382.2215759158134	2	382.221072	762.42759	0.10877	4.1575E-05	-1.0104	-0.00038621	-0.90167	-0.00034464	382.2206225599923	62.402	0.68335	62.402	61.993	62.676	0					42	21	3	0	0	0	0.89176	1	26104	26104		0.79363	0	1	8612700	+		37604	9798	18588	18666	43646	43646					0.0368734329426843
VGYDIHFHDK	10	Unmodified	_VGYDIHFHDK_					0	0	0		ENST00000553462.6_1_14:74416969-74422542:+|nuORF	ENST00000553462.6_1_14:74416969-74422542:+|nuORF	ENST00000553462.6_1_14:74416969-74422542:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	615.8002807497978	2	615.798737	1229.58292	2.11	0.0012993	-0.78597	-0.000484	1.324	0.00081531	615.7976395307159	77.747	0.81273	77.747	77.533	78.346	0					39	25	2	0	0	0	0.89803	1	32451	32451		1.6526	0	1	834800			37605	7280	18589	18667	43647	43647					-0.022686576420937854
VGYFVLFL	8	Unmodified	_VGYFVLFL_					0	0	0		tr|A0A553SQ30|A0A553SQ30_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_15115PE=4SV=1	tr|A0A553SQ30|A0A553SQ30_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_15115PE=4SV=1	tr|A0A553SQ30|A0A553SQ30_NIACIPTSfructosetransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_15115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	479.2787353396416	2	479.275847	956.537141	2.1226	0.0010173	3.5278	0.0016908	5.6505	0.0027081	479.27753635449665	65.057	0.85958	65.057	64.914	65.774	0					36	26	2	0	0	0	0.88958	1	27121	27121		2.8892	0.31174	1	1296600			37606	16496	18590	18668	43648	43648					0.05713348913616301
VGYFYHFGH	9	Unmodified	_VGYFYHFGH_					0	0	0			REV__ENSG00000205667|ENST00000381130|ARSH	REV__ENSG00000205667|ENST00000381130|ARSH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	375.5053283572197	3	376.175015	1125.50321	-1.2458	-0.00046865	-1.4658	-0.00055141	-2.7117	-0.0010201	376.174474878403	5.9688	0.28308	6.5901	6.455	6.7381	0.62127					25	20	2	0	0	0	0.11898	1	2486	2486		1.1933	0.12188	1	167940	+		37607	11819	18591	18669	43649	43649					-0.05451679525435793
VGYGDFQMK	9	Unmodified	_VGYGDFQMK_					0	0	0		ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	ENSG00000167721|ENST00000301364|TSR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7453491091728	2	522.744585	1043.47462	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.705	1	15.602	15.102	16.102	0.89664								0	0	0	0.42693	1	6102	6102		4.756	0	1				37608	3991	18592	18670	43650	43650					-0.045381652168771325
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1786682009697	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7276	1	2.7276	2.2276	3.2276	0								0	0	0	1.0178	1	1118	1118		0.79363	0	1				37609	1480	18593	18671	43651	43651					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1784850955009	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8327	1	2.8327	2.3327	3.3327	0								0	0	0	1.0178	1	1161	1161		0.79363	0	1				37610	1480	18593	18671	43652	43652					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1789123415947	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1607	1	3.1607	2.6607	3.6607	0								0	0	0	1.0178	1	1297	1297		0.79363	0	1				37611	1480	18593	18671	43653	43653					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1795226931572	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5155	1	3.5155	3.0155	4.0155	0								0	0	0	1.0178	1	1443	1443		0.79363	0	1				37612	1480	18593	18671	43654	43654					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1784240603447	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6299	1	3.6299	3.1299	4.1299	0								0	0	0	1.0178	1	1491	1491		0.79363	0	1				37613	1480	18593	18671	43655	43655					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1783630251884	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9595	1	3.9595	3.4595	4.4595	0								0	0	0	1.0178	1	1627	1627		0.79363	0	1				37614	1480	18593	18671	43656	43656					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1795532107353	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0613	1	4.0613	3.5613	4.5613	0								0	0	0	1.0178	1	1669	1669		0.79363	0	1				37615	1480	18593	18671	43657	43657					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1790649294853	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4818	1	4.4818	3.9818	4.9818	0								0	0	0	1.0178	1	1841	1841		0.79363	0	1				37616	1480	18593	18671	43658	43658					-0.06929770233830368
VGYGDMAP	8	Unmodified	_VGYGDMAP_					0	0	0		ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	ENSG00000104848|ENST00000221444|KCNA7	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.1799804568291	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.159	1	34.456	33.956	34.956	0.29701								0	0	0	1.0178	1	14344	14344		0.79363	0	1				37617	1480	18593	18671	43659	43659					-0.06929770233830368
VGYIIERK	8	Unmodified	_VGYIIERK_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	489.2926818728447	2	489.292559	976.570566	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.645	1	33.942	33.442	34.442	0.29701								0	0	0	1.0178	1	14127	14127		2.5775	0	1				37618	3425;7900	18594	18672	43660	43660					0.0813435068552053
VGYIKWLL	8	Unmodified	_VGYIKWLL_					0	0	0			REV__ENST00000599461.1_1_19:21581184-21581334:+|nuORF	REV__ENST00000599461.1_1_19:21581184-21581334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3062011599541	2	496.302396	990.590239	2.5557	0.0012684	3.3504	0.0016628	5.9061	0.0029312	496.30409650775204	64.931	1.1384	65.258	64.916	66.054	0.32689					52	35	2	0	0	0	0.88958	2	27408	27272;27408		2.8892	0.31174	1	1398700	+		37619	14113	18595	18673	43661;43662	43662					0.09456726696282658
VGYKEYKIL	9	Unmodified	_VGYKEYKIL_					0	0	0			REV__tr|A0A7D6ZG60|A0A7D6ZG60_9CLOTManganesetransportregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17265PE=3SV=1	REV__tr|A0A7D6ZG60|A0A7D6ZG60_9CLOTManganesetransportregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_17265PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1005432009697	3	371.549859	1111.62775	0.44969	0.00016708	0.39156	0.00014549	0.84126	0.00031257	371.5502024267022	36.384	0.042847	38.201	38.175	38.218	1.8176					6	3	2	0	0	0	0.11938	1	15254	15254		1.1933	0.41681	1	3166300	+		37620	15638	18596	18674	43663	43663					0.07639773171240449
VGYKMIYHF	9	Unmodified	_VGYKMIYHF_					0	0	0			REV__ENSG00000112796|ENST00000371383|ENPP5	REV__ENSG00000112796|ENST00000371383|ENPP5	MSMS	GG20161007_CRH_Patient100_W632_02	4	579.2947265505791	2	579.294245	1156.57394	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.683	1	57.651	57.151	58.151	1.9684								0	0	0	0.42693	1	23351	23351		4.756	0.42677	1		+		37621	9369	18597	18675	43664	43664					0.0019127746788853983
VGYKNVGTVR	10	Unmodified	_VGYKNVGTVR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8137084841728	2	546.811648	1091.60874	0.99399	0.00054353	1.3389	0.0007321	2.3328	0.0012756	546.8124329279865	30.228	0.73661	30.228	29.946	30.682	0					47	23	3	0	0	0	0.76954	1	12738	12738		15.248	5.1746	1	3371600	+		37622	10496	18598	18676	43665	43665					0.06660236600191638
VGYKNVGTVR	10	Unmodified	_VGYKNVGTVR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8137084841728	2	546.811648	1091.60874	1.1051	0.00060426	0.81867	0.00044766	1.9237	0.0010519	546.8119757075083	29.793	0.48143	30.079	29.871	30.353	0.2859					34	15	3	0	0	0	0.52861	2	12530	12431;12530		26.268	3.5319	1	4270900	+		37623	10496	18598	18676	43666;43667	43667					0.06660236600191638
VGYKNVGTVR	10	Unmodified	_VGYKNVGTVR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8118774294853	2	546.811648	1091.60874	0.79346	0.00043387	0.23026	0.00012591	1.0237	0.00055978	546.8116678872784	28.526	0.52014	29.805	29.515	30.035	1.2789					51	16	4	0	0	0	0.65659	2	11888	11888;12037		20.415	3.0078	1	12207000	+		37624	10496	18598	18676	43668;43669	43668					0.06660236600191638
VGYKNVGTVR	10	Unmodified	_VGYKNVGTVR_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8129150271416	2	546.811648	1091.60874	0.71066	0.0003886	0.80318	0.00043919	1.5138	0.00082779	546.8120097585053	27.906	0.52082	29.682	29.418	29.939	1.7754					46	16	4	0	0	0	0.65659	2	11624	11624;11768		20.415	3.3016	1	16800000	+		37625	10496	18598	18676	43670;43671	43670					0.06660236600191638
VGYLQWVRV	9	Unmodified	_VGYLQWVRV_					0	0	0			REV__ENST00000535182.1_1_12:132325313-132329132:+|nuORF	REV__ENST00000535182.1_1_12:132325313-132329132:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	559.8217651247978	2	560.319109	1118.62366	1.7633	0.00098799	1.3515	0.00075729	3.1148	0.0017453	560.3201598782892	90.579	0.15062	90.579	90.47	90.621	0					6	4	2	0	0	0	0.11946	1	37868	37868		0	0	1	371630	+		37626	11717	18599	18677	43672	43672					0.06909728468190224
VGYPGDPVYWL	11	Unmodified	_VGYPGDPVYWL_					0	0	0		nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6	nc|ENSG00000177119|Q4KMQ2-3|ANO6	nc|ENSG00000177119|Q4KMQ2-3|ANO6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.9046203494072	4	317.160483	1264.61282	-3.293	-0.0010444	-1.2293	-0.00038987	-4.5223	-0.0014343	317.1600224098529	16.971	0.34562	16.971	16.847	17.192	0					21	10	3	0	0	0	0.14606	1	7007	7007		0.50596	0	1	640950			37627	4436	18600	18678	43673	43673					-0.008897186967487869
VGYPIEKFI	9	Unmodified	_VGYPIEKFI_					0	0	0		ENST00000539508.5_1_9:13106966-13133978:-|nuORF;nc|ENSG00000107186|O75970-5|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-2|MPDZ;ENSG00000107186|ENST00000319217|MPDZ	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.1921874880791	2	533.302593	1064.59063	4.2539	0.0022686	-0.35345	-0.0001885	3.9005	0.0020801	533.3021206390406	93.341	0.4199	94.213	93.965	94.385	0.87176					30	12	3	0	0	0	0.11787	1	39190	39190		5.2307	0	1	3178500			37628	1593	18601	18679	43674	43674					0.060921016254724236
VGYREGRRR	9	Unmodified	_VGYREGRRR_					0	0	0		ENST00000357066.7_1_19:2085254-2096298:-|nuORF	ENST00000357066.7_1_19:2085254-2096298:-|nuORF	ENST00000357066.7_1_19:2085254-2096298:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8260986208916	2	574.823412	1147.63227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7814	1	9.8594	9.3594	10.359	0.077971								0	0	0	0.42693	1	4053	4053		0.6015	0	1				37629	5997	18602	18680	43675	43675					0.06436095157368982
VGYREGRRR	9	Unmodified	_VGYREGRRR_					0	0	0		ENST00000357066.7_1_19:2085254-2096298:-|nuORF	ENST00000357066.7_1_19:2085254-2096298:-|nuORF	ENST00000357066.7_1_19:2085254-2096298:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8235961794853	2	574.823412	1147.63227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9976	1	10.076	9.5756	10.576	0.077971								0	0	0	0.42693	1	4144	4144		0.6015	0	1				37630	5997	18602	18680	43676	43676					0.06436095157368982
VGYRNEKYEN	10	Unmodified	_VGYRNEKYEN_					0	0	0		tr|A0A7D6ZZ39|A0A7D6ZZ39_9CLOTCobalaminbiosynthesisproteinCobDOS=ClostridiumintestinaleOX=36845GN=cobDPE=3SV=1	tr|A0A7D6ZZ39|A0A7D6ZZ39_9CLOTCobalaminbiosynthesisproteinCobDOS=ClostridiumintestinaleOX=36845GN=cobDPE=3SV=1	tr|A0A7D6ZZ39|A0A7D6ZZ39_9CLOTCobalaminbiosynthesisproteinCobDOS=ClostridiumintestinaleOX=36845GN=cobDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.5379211306572	3	424.538681	1270.59421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6998	1	9.6998	9.1998	10.2	0								0	0	0	0.66151	1	3993	3993		1.9064	0.9441	1				37631	17206	18603	18681	43677	43677					-0.030258803385777355
VGYRRERR	8	Unmodified	_VGYRRERR_					0	0	0			REV__ENSG00000171150|ENST00000394861|SOCS5	REV__ENSG00000171150|ENST00000394861|SOCS5	MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3135253787041	2	546.312681	1090.61081	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.235	1	46.564	46.064	47.064	0.32899								0	0	0	1.0178	1	19403	19403		0.79363	0	1		+		37632	11012	18604	18682	43678	43678					0.06912710128653998
VGYSIQKLL	9	Unmodified	_VGYSIQKLL_					0	0	0		ENST00000446006.1_1_7:64324607-64324745:+|nuORF	ENST00000446006.1_1_7:64324607-64324745:+|nuORF	ENST00000446006.1_1_7:64324607-64324745:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8095580935478	2	510.808042	1019.60153	0.43482	0.00022211	0.35386	0.00018075	0.78868	0.00040286	510.8079752158286	55.2	0.29269	57.169	56.959	57.252	1.9684					23	13	2	0	0	0	0.042029	1	23106	23106		74.423	3.2892	1	6382600			37633	6582	18605	18683	43679	43679					0.09251503999769284
VGYSLGNMSLI	11	Unmodified	_VGYSLGNMSLI_					0	0	0			REV__ENSG00000066084|ENST00000301180|DIP2B	REV__ENSG00000066084|ENST00000301180|DIP2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3007079958916	2	577.299724	1152.5849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.15	1	101.33	100.83	101.83	0.18047								0	0	0	0.63775	1	42564	42564		1.0715	0.10919	1		+		37634	8681	18606	18684	43680	43680					0.014706350515098165
VGYSYFDRH	9	Unmodified	_VGYSYFDRH_					0	0	0		tr|A0A553SKV2|A0A553SKV2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19345PE=4SV=1	tr|A0A553SKV2|A0A553SKV2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19345PE=4SV=1	tr|A0A553SKV2|A0A553SKV2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_19345PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	381.8433715701103	3	381.845446	1142.51451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7717	1	9.4082	8.9082	9.9082	0.63651								0	0	0	0.42693	1	3641	3641		2.9952	0	1				37635	16309	18607	18685	43681	43681					-0.05104902221955854
VGYTTLNR	8	Unmodified	_VGYTTLNR_					0	0	0		CHN1|p.S180Qfs*5|1|0.18|ENSG00000128656|chr2:174877852-174877852|C/-|frameshift_variant;nc|ENSG00000128656|P15882-3|CHN1;ENSG00000128656|ENST00000409900|CHN1	CHN1|p.S180Qfs*5|1|0.18|ENSG00000128656|chr2:174877852-174877852|C/-|frameshift_variant	CHN1|p.S180Qfs*5|1|0.18|ENSG00000128656|chr2:174877852-174877852|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1460449099541	2	462.250892	922.48723	1.5683	0.00072495	-0.049538	-2.2899E-05	1.5188	0.00070205	462.2509918860159	31.334	0.30254	31.334	31.201	31.503	0					11	9	2	0	0	0	2.3239	1	13124	13124		2.5775	0	1	515330			37636	155	18608	18686	43682	43682					0.022886142376592034
VGYVDDTQFV	10	Unmodified	_VGYVDDTQFV_					0	0	0		ENSG00000204592|ENST00000376630|HLA-E;ENST00000484194.1_1_6:30457308-30457777:+|nuORF;nc|ENSG00000206503|P04439-2|HLA-A;ENSG00000204525|ENST00000376228|HLA-C;ENSG00000206503|ENST00000376809|HLA-A;nc|ENSG00000206341|P01893|HLA-H;nc|ENSG00000204525|P10321-2|HLA-C;ENST00000474381.1_1_6:31323854-31324663:-|nuORF;ENST00000487245.5_1_6:31239370-31239763:-|nuORF;ENST00000484378.1_1_6:31239370-31239848:-|nuORF;ENST00000495183.5_1_6:29910330-29910808:+|nuORF;ENSG00000234745|ENST00000412585|HLA-B;ENST00000498007.1_1_6:31324459-31324935:-|nuORF	ENSG00000204592|ENST00000376630|HLA-E;ENSG00000234745|ENST00000412585|HLA-B	ENSG00000204592|ENST00000376630|HLA-E	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.7745849490166	2	571.771854	1141.52915	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.246	1	72.246	71.746	72.746	0								0	0	0	0.66176	1	30083	30083		1.4819	0.68827	1				37637	5151;5313	18609	18687	43683	43683					-0.035948748644841544
VHASSGHKY	9	Unmodified	_VHASSGHKY_					0	0	0		ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.2452575564384	2	493.246141	984.477728	1.7694	0.00087274	-1.0889	-0.00053711	0.68045	0.00033563	493.2456127628745	29.601	0.18256	29.88	29.743	29.925	0.2793					8	5	2	0	0	0	0.77526	1	12403	12403		4.3292	0.73274	1	478510			37638	3335	18610	18688	43684	43684					-0.015131540478591887
VHASSGHKY	9	Unmodified	_VHASSGHKY_					0	0	0		ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	ENSG00000152684|ENST00000274311|PELO	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	493.246141	984.477728	0.97713	0.00048197	-0.34144	-0.00016842	0.63569	0.00031355	493.24578245212496	29.708	0.37017	29.708	29.515	29.885	0	-0.085908	0.00019053	NaN	4.3292	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1711300			37639	3335	18610	18688							-0.015131540478591887
VHCAAPRA	8	Unmodified	_VHCAAPRA_					0	0	0		nc|ENSG00000277758|X6R8R1|SYT15B;nc|ENSG00000204176|Q9BQS2-3|SYT15	nc|ENSG00000277758|X6R8R1|SYT15B	nc|ENSG00000277758|X6R8R1|SYT15B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	412.7147704958916	2	412.713422	823.412291	2.649	0.0010933	-0.55883	-0.00023064	2.0902	0.00086266	412.7130136477598	58.316	0.31546	58.639	58.46	58.776	0.32299					21	9	3	0	0	0	0.89051	2	24422	24422;24473		2.3027	0.4585	1	1969400			37640	7975	18611	18689	43685;43686	43685					-0.006478467745751004
VHCAFPDL	8	Unmodified	_VHCAFPDL_					0	0	0			REV__UNC5D|p.E736Gfs*14|1|0.04|ENSG00000156687|chr8:35759359-35759360|-/T|frameshift_variant	REV__UNC5D|p.E736Gfs*14|1|0.04|ENSG00000156687|chr8:35759359-35759360|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.2152282595634	2	451.215463	900.416374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.184	1	34.462	33.962	34.962	1.2782								0	0	0	1.0178	1	13914	13914		0.79363	0	1		+		37641	10517	18612	18690	43687	43687					-0.037818020715235434
VHCEPCDEK	9	Unmodified	_VHCEPCDEK_					0	0	0		ENSG00000115461|ENST00000233813|IGFBP5	ENSG00000115461|ENST00000233813|IGFBP5	ENSG00000115461|ENST00000233813|IGFBP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2169067263603	2	530.215334	1058.41612	1.7974	0.00095303	-0.12228	-6.4833E-05	1.6752	0.0008882	530.2154084370768	41.449	1.5297	41.449	40.698	42.227	0					85	47	2	0	0	0	0.66839	1	17412	17412		8.5933	1.304	1	946770			37642	1921	18613	18691	43688	43688					-0.11075589853680867
VHCEPCDEK	9	Unmodified	_VHCEPCDEK_					0	0	0		ENSG00000115461|ENST00000233813|IGFBP5	ENSG00000115461|ENST00000233813|IGFBP5	ENSG00000115461|ENST00000233813|IGFBP5	MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2146484255791	2	530.215334	1058.41612	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.406	1	38.406	37.906	38.906	0								0	0	0	0.40188	1	16100	16100		8.5933	1.304	1				37643	1921	18613	18691	43689	43689					-0.11075589853680867
VHCLHLFF	8	Unmodified	_VHCLHLFF_					0	0	0		ENST00000560605.1_1_15:91524929-91537723:-|nuORF;ENST00000557763.5_1_15:91524929-91537713:-|nuORF	ENST00000560605.1_1_15:91524929-91537723:-|nuORF	ENST00000560605.1_1_15:91524929-91537723:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1776916384697	3	339.177591	1014.51094	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.234	1	32.234	31.734	32.734	0								0	0	0	1.0178	1	13504	13504		0.45834	0	1				37644	7310	18614	18692	43690	43690					0.004267564704832694
VHEAQKQKQ	9	Unmodified	_VHEAQKQKQ_					0	0	0			REV__nc|ENSG00000167535|P54284-5|CACNB3	REV__nc|ENSG00000167535|P54284-5|CACNB3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	366.0397216677666	3	365.868362	1094.58326	-1.2697	-0.00046454	-0.79775	-0.00029187	-2.0674	-0.00075641	365.86825182827056	29.286	0.30721	29.286	29.116	29.423	0					15	9	2	0	0	0	0.11938	1	12268	12268		0.26902	0.26902	1	620490	+		37645	10867	18615	18693	43691	43691					0.03974762077768901
VHEFSCYFEIK	11	Unmodified	_VHEFSCYFEIK_					0	0	0			REV__TDRD6|p.F523Tfs*12|1|0.03|ENSG00000180113|chr6:46689694-46689695|-/AC|frameshift_variant	REV__TDRD6|p.F523Tfs*12|1|0.03|ENSG00000180113|chr6:46689694-46689695|-/AC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.8878051638603	3	467.888434	1400.64347	1.3568	0.00063485	-3.0811	-0.0014416	-1.7242	-0.00080674	467.8872157349783	22.918	0.38879	22.918	22.75	23.139	0					40	12	5	0	0	0	0.90077	1	9572	9572		9.7643	1.0125	1	13861000	+		37646	11290	18616	18694	43692	43692					-0.04082308374063359
VHELEEPF	8	Unmodified	_VHELEEPF_					0	0	0			REV__nc|ENSG00000147202|O60879-2|DIAPH2	REV__nc|ENSG00000147202|O60879-2|DIAPH2	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.2452270388603	2	500.242732	998.470912	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.253	1	31.544	31.044	32.044	0.29086								0	0	0	1.0178	1	13118	13118		2.8892	0.82947	1		+		37647	10323	18617	18695	43693	43693					-0.028385117190850906
VHELEKSKR	9	Unmodified	_VHELEKSKR_					0	0	0		nc|ENSG00000133026|P35580|MYH10;nc|ENSG00000133026|P35580-5|MYH10;nc|ENSG00000133026|P35580-2|MYH10;nc|ENSG00000133026|P35580-3|MYH10;ENSG00000133026|ENST00000360416|MYH10;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;CHD2-MYH9|1|fusion;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000133026|P35580|MYH10;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;nc|ENSG00000133392|P35749-4|MYH11	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3232910037041	2	563.32238	1124.63021	0.62393	0.00035147	0.96753	0.00054503	1.5915	0.0008965	563.323296450614	22.433	0.3576	22.656	22.436	22.794	0.223					22	11	2	0	0	0	0.76456	1	9289	9289		4.756	0	1	1182000			37648	1266;2569;2554	18618	18696	43694	43694					0.07287621628893248
VHEMVIIFTMK	11	Unmodified	_VHEMVIIFTMK_					0	0	0			REV__ENSG00000171714|ENST00000324559|ANO5	REV__ENSG00000171714|ENST00000324559|ANO5	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9124023318291	3	449.910293	1346.70905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.293	1	21.419	20.919	21.919	1.1254								0	0	0	0.63775	1	8454	8454		1.3296	0.55311	1		+		37649	11041	18619	18697	43695	43695					0.04956389547305662
VHFFLKHIRL	10	Unmodified	_VHFFLKHIRL_					0	0	0		ENST00000496418.5_1_3:132361537-132378459:-|nuORF	ENST00000496418.5_1_3:132361537-132378459:-|nuORF	ENST00000496418.5_1_3:132361537-132378459:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.2011901736259	4	328.202751	1308.7819	0.18251	5.9899E-05	-1.8096	-0.00059391	-1.6271	-0.00053401	328.20199998614953	36.413	0.99413	38.231	38.001	38.995	1.8176					157	67	3	0	0	0	0.88031	1	15388	15388		3.5871	0.74377	1	36142000			37650	6953	18620	18698	43696	43696					0.13985647447270821
VHFKLPRWR	9	Unmodified	_VHFKLPRWR_					0	0	0		ENST00000528289.5_2_11:10876613-10877751:-|nuORF;ENST00000526020.5_1_11:10876539-10877751:-|nuORF	ENST00000528289.5_2_11:10876613-10877751:-|nuORF	ENST00000528289.5_2_11:10876613-10877751:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8727294802666	2	619.867092	1237.71963	2.0999	0.0013017	4.3446	0.0026931	6.4445	0.0039947	619.8695638019524	78.079	0.87718	78.079	77.658	78.535	0					59	27	3	0	0	0	0.84963	1	32552	32552		0.6015	0.076735	1	1331100			37651	7120	18621	18699	43697	43697					0.11027921098911975
VHFRIPVT	8	Unmodified	_VHFRIPVT_					0	0	0			REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	323.5272399783134	3	323.527388	967.560336	0.032027	1.0362E-05	0.38953	0.00012602	0.42156	0.00013639	323.5275161578848	25.662	0.49393	26.921	26.741	27.235	1.2594					56	15	5	0	0	0	0.88587	1	10758	10758		3.5965	0	1	38300000	+		37652	15030	18622	18700	43698	43698					0.07525787750955715
VHFRIPVT	8	Unmodified	_VHFRIPVT_					0	0	0			REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	323.527388	967.560336	0.032027	1.0362E-05	0.38953	0.00012602	0.42156	0.00013639	323.5275161578848	25.662	0.49393	26.921	26.741	27.235	1.2594	-0.045297	-0.0010062	NaN	3.5965	56	15	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38300000	+		37653	15030	18622	18700							0.07525787750955715
VHFRIPVT	8	Unmodified	_VHFRIPVT_					0	0	0			REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	REV__tr|A0A553SMR1|A0A553SMR1_NIACI5-hydroxyisouratehydrolaseOS=NialliacirculansOX=1397GN=uraHPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	323.527388	967.560336	0.0050388	1.6302E-06	2.4645	0.00079734	2.4696	0.00079897	323.528270164332	25.295	0.39568	27.012	26.818	27.213	1.7167	0.045297	0.0010077	NaN	3.5965	45	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	53509000	+		37654	15030	18622	18700							0.07525787750955715
VHFTDWLK	8	Unmodified	_VHFTDWLK_					0	0	0			REV__nc|ENSG00000054796|Q9Y5K1-2|SPO11	REV__nc|ENSG00000054796|Q9Y5K1-2|SPO11	MSMS	GG20161007_CRH_Patient100_A02_01	1	523.2784911990166	2	523.276909	1044.53927	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.207	1	57.207	56.707	57.707	0								0	0	0	1.0178	1	23871	23871		5.7604	0	1		+		37655	8633	18623	18701	43699	43699					0.01877777651429824
VHGANDLRCS	10	Unmodified	_VHGANDLRCS_					0	0	0		tr|A0A553SLL6|A0A553SLL6_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20740PE=4SV=1	tr|A0A553SLL6|A0A553SLL6_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20740PE=4SV=1	tr|A0A553SLL6|A0A553SLL6_NIACIXREfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_20740PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2490722537041	2	536.25364	1070.49273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.94	1	103.1	102.6	103.6	0.16445								0	0	0	0.6607	1	43364	43364		3.2813	0.97858	1				37656	16340	18624	18702	43700	43700					-0.039700302421806555
VHGGLALR	8	Unmodified	_VHGGLALR_					0	0	0			REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	411.7512390017509	2	411.750862	821.487171	-0.3864	-0.0001591	1.3265	0.00054619	0.94011	0.00038709	411.75124782941384	12.852	0.12528	13.578	13.505	13.631	0.72639					5	3	2	0	0	0	0.87935	1	5349	5349		9.3474	0	1	226550	+		37657	12134	18625	18703	43701	43701					0.06928659028324091
VHGGLALR	8	Unmodified	_VHGGLALR_					0	0	0			REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	411.750862	821.487171	-0.3864	-0.0001591	1.3265	0.00054619	0.94011	0.00038709	411.75124782941384	12.852	0.12528	13.578	13.505	13.631	0.72639	0.083091	0.00081946	NaN	9.3474	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226550	+		37658	12134	18625	18703							0.06928659028324091
VHGGLALR	8	Unmodified	_VHGGLALR_					0	0	0			REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	REV__ENST00000245796.10_1_2:113960379-113960733:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	411.750862	821.487171	0.044699	1.8405E-05	-1.436	-0.00059127	-1.3913	-0.00057286	411.7501727262715	12.624	0.15494	13.412	13.303	13.458	0.78751	-0.083091	-0.0014555	NaN	9.3474	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	235800	+		37659	12134	18625	18703							0.06928659028324091
VHGLKVVG	8	Unmodified	_VHGLKVVG_					0	0	0			REV__ENST00000480898.1_22:24380747-24380987:-|nuORF	REV__ENST00000480898.1_22:24380747-24380987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	808.5060302615166	1	808.503949	807.496673	2.7683	0.0022382	0.075941	6.1398E-05	2.8442	0.0022996	808.5037214250103	106.6	0.12244	106.76	106.7	106.82	0.15781					11	5	3	0	0	0	0.89176	1	45711	45711		0.79363	0	1	16746000	+		37660	13355	18626	18704	43702	43702					0.08522427313857861
VHGLKVVG	8	Unmodified	_VHGLKVVG_					0	0	0			REV__ENST00000480898.1_22:24380747-24380987:-|nuORF	REV__ENST00000480898.1_22:24380747-24380987:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	808.503949	807.496673	2.7683	0.0022382	0.075941	6.1398E-05	2.8442	0.0022996	808.5037214250103	106.6	0.12244	106.76	106.7	106.82	0.15781	-0.0058851	0.00035106	NaN	0.79363	11	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16746000	+		37661	13355	18626	18704							0.08522427313857861
VHGRPRRI	8	Unmodified	_VHGRPRRI_					0	0	0		ENST00000526857.2_1_11:697712-697790:-|nuORF	ENST00000526857.2_1_11:697712-697790:-|nuORF	ENST00000526857.2_1_11:697712-697790:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.8070251345634	2	495.807034	989.599515	2.932	0.0014537	-2.8416	-0.0014089	0.090379	4.4811E-05	495.8050022065136	73.477	0.64846	73.802	73.553	74.201	0.32494					39	20	3	0	0	0	0.89176	1	30710	30710		0.79363	0	1	1775600			37662	7128	18627	18705	43703	43703					0.10429932825161359
VHHFIFWFGT	10	Unmodified	_VHHFIFWFGT_					0	0	0			REV__nc|ENSG00000103888|Q8WUJ3-2|CEMIP	REV__nc|ENSG00000103888|Q8WUJ3-2|CEMIP	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880187869072	3	430.885464	1289.63456	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.58	1	110.73	110.23	111.23	0.15228								0	0	0	0.6624	1	47947	47947		0.13989	0	1		+		37663	9122	18628	18706	43704	43704					0.0013313084245965001
VHIMCDDEDIK	11	Unmodified	_VHIMCDDEDIK_					0	0	0		FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant;FLNB|p.T1593Ifs*40|1|0.08|ENSG00000136068|chr3:58136084-58136085|-/TCTATCAAGTC|frameshift_variant;nc|ENSG00000136068|O75369-5|FLNB;nc|ENSG00000136068|O75369-4|FLNB;FLNB|p.H2355Tfs*98|1|0.04|ENSG00000136068|chr3:58163193-58163194|-/GA|frameshift_variant;FLNB|p.S2513Rfs*5|1|0.04|ENSG00000136068|chr3:58169710-58169711|-/GATTC|frameshift_variant;nc|ENSG00000136068|O75369-6|FLNB;nc|ENSG00000136068|O75369-3|FLNB;nc|ENSG00000136068|O75369-2|FLNB;nc|ENSG00000136068|O75369-9|FLNB;ENSG00000136068|ENST00000295956|FLNB;nc|ENSG00000136068|O75369-8|FLNB;nc|ENSG00000136068|O75369-7|FLNB	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	FLNB|p.L1100Ffs*93|1|0.04|ENSG00000136068|chr3:58123263-58123263|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	439.8650695681572	3	439.865301	1316.57407	0.05982	2.6313E-05	0.75905	0.00033388	0.81887	0.00036019	439.8655176786457	11.833	0.15379	11.833	11.757	11.911	0					11	4	4	0	0	0	0.9945	1	4902	4902		4.1166	0.52957	1	2561300			37664	2705	18629	18707	43705	43705					-0.07155135385119138
VHIVCGLHLPQ	11	Unmodified	_VHIVCGLHLPQ_					0	0	0			REV__ENST00000311127.8_1_3:124686878-124687106:-|nuORF	REV__ENST00000311127.8_1_3:124686878-124687106:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3395263552666	2	608.336975	1214.6594	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.87	1	104.04	103.54	104.54	0.1731								0	0	0	0.63775	1	43835	43835		1.4819	0.8804	1		+		37665	12366	18630	18708	43706	43706					0.06065442653539321
VHLAFYPGR	9	Unmodified	_VHLAFYPGR_					0	0	0			REV__tr|A0A7D6VPA0|A0A7D6VPA0_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15835PE=4SV=1	REV__tr|A0A7D6VPA0|A0A7D6VPA0_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_15835PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	530.2919799685478	2	530.290351	1058.56615	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.775	1	37.077	36.577	37.577	0.30197								0	0	0	0.42693	1	15466	15466		4.756	0	1		+		37666	15354	18631	18709	43707	43707					0.03920886262608292
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1915466189384	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.825	1	31.825	31.325	32.325	0								0	0	0	0.42693	1	13333	13333		1.1933	0.12188	1				37667	630	18632	18710	43708	43708					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1909057497978	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.977	1	32.977	32.477	33.477	0								0	0	0	0.42693	1	13815	13815		1.1933	0.79263	1				37668	630	18632	18710	43709	43709					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1916686892509	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.86	1	33.86	33.36	34.36	0								0	0	0	0.42693	1	14189	14189		1.1933	0.79263	1				37669	630	18632	18710	43710	43710					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1916686892509	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.303	1	34.303	33.803	34.803	0								0	0	0	0.42693	1	14379	14379		1.1933	0.79263	1				37670	630	18632	18710	43711	43711					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1905395388603	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.641	1	38.641	38.141	39.141	0								0	0	0	0.42693	1	16198	16198		1.1933	0.79263	1				37671	630	18632	18710	43712	43712					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1916076540947	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.621	1	48.621	48.121	49.121	0								0	0	0	0.42693	1	20305	20305		1.1933	0.735	1				37672	630	18632	18710	43713	43713					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1908752322197	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.196	1	59.196	58.696	59.696	0								0	0	0	0.42693	1	24685	24685		1.1933	0.735	1				37673	630	18632	18710	43714	43714					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1910583376884	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.534	1	90.534	90.034	91.034	0								0	0	0	0.42693	1	37840	37840		1.1933	0.735	1				37674	630	18632	18710	43715	43715					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1920959353447	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.027	1	45.354	44.854	45.854	0.32674								0	0	0	0.42693	1	18907	18907		1.1933	0.12188	1				37675	630	18632	18710	43716	43716					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1918517947197	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.539	1	57.862	57.362	58.362	0.32298								0	0	0	0.42693	1	24126	24126		1.1933	0.12188	1				37676	630	18632	18710	43717	43717					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1918212771416	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.165	1	58.488	57.988	58.988	0.32298								0	0	0	0.42693	1	24381	24381		1.1933	0.12188	1				37677	630	18632	18710	43718	43718					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1924011111259	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.286	1	58.609	58.109	59.109	0.32298								0	0	0	0.42693	1	24430	24430		1.1933	0.12188	1				37678	630	18632	18710	43719	43719					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1921264529228	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.432	1	60.76	60.26	61.26	0.32809								0	0	0	0.42693	1	25324	25324		1.1933	0.12188	1				37679	630	18632	18710	43720	43720					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1916381716728	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.816	1	61.144	60.644	61.644	0.32809								0	0	0	0.42693	1	25481	25481		1.1933	0.735	1				37680	630	18632	18710	43721	43721					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1920654177666	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.433	1	61.763	61.263	62.263	0.32974								0	0	0	0.42693	1	25738	25738		1.1933	0.12188	1				37681	630	18632	18710	43722	43722					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1920043826103	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.682	1	62.011	61.511	62.511	0.32974								0	0	0	0.42693	1	25844	25844		1.1933	0.735	1				37682	630	18632	18710	43723	43723					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1918823122978	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.927	1	62.257	61.757	62.757	0.32974								0	0	0	0.42693	1	25947	25947		1.1933	0.735	1				37683	630	18632	18710	43724	43724					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1918823122978	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.049	1	62.379	61.879	62.879	0.32974								0	0	0	0.42693	1	25997	25997		1.1933	0.12188	1				37684	630	18632	18710	43725	43725					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1917907595634	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.175	1	62.504	62.004	63.004	0.32974								0	0	0	0.42693	1	26049	26049		1.1933	0.735	1				37685	630	18632	18710	43726	43726					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1916076540947	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.298	1	62.628	62.128	63.128	0.32974								0	0	0	0.42693	1	26101	26101		1.1933	0.735	1				37686	630	18632	18710	43727	43727					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1919128298759	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.421	1	62.751	62.251	63.251	0.32974								0	0	0	0.42693	1	26153	26153		1.1933	0.735	1				37687	630	18632	18710	43728	43728					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1918823122978	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.672	1	63.001	62.501	63.501	0.32974								0	0	0	0.42693	1	26258	26258		1.1933	0.735	1				37688	630	18632	18710	43729	43729					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1919738650322	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.796	1	63.125	62.625	63.625	0.32974								0	0	0	0.42693	1	26310	26310		1.1933	0.12188	1				37689	630	18632	18710	43730	43730					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1917602419853	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.914	1	63.244	62.744	63.744	0.32974								0	0	0	0.42693	1	26359	26359		1.1933	0.12188	1				37690	630	18632	18710	43731	43731					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1915771365166	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.011	1	63.34	62.84	63.84	0.32974								0	0	0	0.42693	1	26399	26399		1.1933	0.12188	1				37691	630	18632	18710	43732	43732					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1916381716728	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.108	1	63.438	62.938	63.938	0.32974								0	0	0	0.42693	1	26440	26440		1.1933	0.12188	1				37692	630	18632	18710	43733	43733					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1917297244072	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.238	1	63.568	63.068	64.068	0.32974								0	0	0	0.42693	1	26494	26494		1.1933	0.12188	1				37693	630	18632	18710	43734	43734					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1916076540947	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.389	1	63.719	63.219	64.219	0.32954								0	0	0	0.42693	1	26556	26556		1.1933	0.12188	1				37694	630	18632	18710	43735	43735					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1909057497978	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.613	1	63.942	63.442	64.442	0.32899								0	0	0	0.42693	1	26651	26651		1.1933	0.12188	1				37695	630	18632	18710	43736	43736					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1912109255791	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.727	1	64.056	63.556	64.556	0.32899								0	0	0	0.42693	1	26702	26702		1.1933	0.735	1				37696	630	18632	18710	43737	43737					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1919433474541	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.844	1	64.173	63.673	64.673	0.32899								0	0	0	0.42693	1	26752	26752		1.1933	0.12188	1				37697	630	18632	18710	43738	43738					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1917602419853	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.75	1	80.016	79.516	80.516	1.2668								0	0	0	0.42693	1	33057	33057		1.1933	0.735	1				37698	630	18632	18710	43739	43739					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	306.1915466189384	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.112	1	80.379	79.879	80.879	1.2668								0	0	0	0.42693	1	33208	33208		1.1933	0.12188	1				37699	630	18632	18710	43740	43740					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1911498904228	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.025	1	65.953	65.453	66.453	1.928								0	0	0	0.42693	1	26863	26863		1.1933	0.735	1				37700	630	18632	18710	43741	43741					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1916992068291	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.157	1	66.085	65.585	66.585	1.928								0	0	0	0.42693	1	26917	26917		1.1933	0.735	1				37701	630	18632	18710	43742	43742					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1918517947197	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.275	1	66.203	65.703	66.703	1.928								0	0	0	0.42693	1	26966	26966		1.1933	0.735	1				37702	630	18632	18710	43743	43743					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1916381716728	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.532	1	66.46	65.96	66.96	1.928								0	0	0	0.42693	1	27071	27071		1.1933	0.735	1				37703	630	18632	18710	43744	43744					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913329958916	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.694	1	66.622	66.122	67.122	1.928								0	0	0	0.42693	1	27137	27137		1.1933	0.735	1				37704	630	18632	18710	43745	43745					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1910888552666	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.499	1	67.408	66.908	67.908	1.9085								0	0	0	0.42693	1	27473	27473		1.1933	0.735	1				37705	630	18632	18710	43746	43746					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1910583376884	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.727	1	67.635	67.135	68.135	1.9085								0	0	0	0.42693	1	27571	27571		1.1933	0.735	1				37706	630	18632	18710	43747	43747					0.09303269519421065
VHLALLPPG	9	Unmodified	_VHLALLPPG_					0	0	0		INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant;ENSG00000027644|ENST00000368195|INSRR	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	INSRR|p.A1268Gfs*13|1|0.08|ENSG00000027644|chr1:156840964-156840965|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	306.1913940310478	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.298	1	68.187	67.687	68.687	1.8889								0	0	0	0.42693	1	27812	27812		1.1933	0.735	1				37707	630	18632	18710	43748	43748					0.09303269519421065
VHLAQALH	8	Unmodified	_VHLAQALH_					0	0	0			REV__ADCY8|p.K765Vfs*29|1|0.39|ENSG00000155897|chr8:130849718-130849721|ATTT/-|frameshift_variant	REV__ADCY8|p.K765Vfs*29|1|0.39|ENSG00000155897|chr8:130849718-130849721|ATTT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	445.1209594607353	2	444.756144	887.497735	1.7379	0.00077296	1.3562	0.00060317	3.0941	0.0013761	444.75671787183234	48.088	0.31802	48.088	47.872	48.19	0					15	9	2	0	0	0	2.3239	1	20060	20060		0.79363	0	1	451840	+		37708	8086	18633	18711	43749	43749					0.04948641682756261
VHLAQFHR	8	Unmodified	_VHLAQFHR_					0	0	0			REV__ARL4D|p.P17R|1|0.46|ENSG00000175906|chr17:43399782-43399782|C/G|missense_variant	REV__ARL4D|p.P17R|1|0.46|ENSG00000175906|chr17:43399782-43399782|C/G|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2816039919853	2	504.280318	1006.54608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.33	1	21.456	20.956	21.956	1.1254								0	0	0	1.0178	1	8470	8470		5.7604	0	1		+		37709	8141	18634	18712	43750	43750					0.0430713532266509
VHLERRHV	8	Unmodified	_VHLERRHV_					0	0	0		ENST00000436105.1_1_7:43549553-43549670:-|nuORF	ENST00000436105.1_1_7:43549553-43549670:-|nuORF	ENST00000436105.1_1_7:43549553-43549670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3049194216728	2	523.304324	1044.5941	2.7242	0.0014256	-1.4474	-0.00075744	1.2768	0.00066815	523.3035681013132	85.308	0.44034	85.308	85.068	85.508	0					33	13	3	0	0	0	0.89008	1	35561	35561		2.5775	0.73324	1	5614500			37710	6531	18635	18713	43751	43751					0.07358209242693192
VHLERRHV	8	Unmodified	_VHLERRHV_					0	0	0		ENST00000436105.1_1_7:43549553-43549670:-|nuORF	ENST00000436105.1_1_7:43549553-43549670:-|nuORF	ENST00000436105.1_1_7:43549553-43549670:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	523.304324	1044.5941	2.734	0.0014307	-1.7844	-0.00093378	0.94961	0.00049694	523.3033076828397	85.17	0.43631	85.422	85.196	85.632	0.25227	0.057034	-0.00016711	NaN	2.5775	38	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6066900			37711	6531	18635	18713							0.07358209242693192
VHLGLIRP	8	Unmodified	_VHLGLIRP_					0	0	0			REV__ENST00000494373.1_1_2:54014347-54015815:+|nuORF	REV__ENST00000494373.1_1_2:54014347-54015815:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1967040896416	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.407	1	31.698	31.198	32.198	0.29086								0	0	0	1.0178	1	13183	13183		0.40072	0	1		+		37712	13453	18636	18714	43752	43752					0.10978091613571905
VHLGLIRP	8	Unmodified	_VHLGLIRP_					0	0	0			REV__ENST00000494373.1_1_2:54014347-54015815:+|nuORF	REV__ENST00000494373.1_1_2:54014347-54015815:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1962158083916	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.593	1	31.392	30.892	31.892	1.7987								0	0	0	1.0178	1	12404	12404		0.40072	0	1		+		37713	13453	18636	18714	43753	43753					0.10978091613571905
VHLTKIGRML	10	Unmodified	_VHLTKIGRML_					0	0	0			REV__tr|A0A553SMV7|A0A553SMV7_NIACICystathioninebeta-lyaseMetCOS=NialliacirculansOX=1397GN=metCPE=3SV=1	REV__tr|A0A553SMV7|A0A553SMV7_NIACICystathioninebeta-lyaseMetCOS=NialliacirculansOX=1397GN=metCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3580200076103	2	584.355168	1166.69578	3.3962	0.0019846	1.5396	0.00089968	4.9358	0.0028843	584.356212827372	73.886	1.861	75.204	74.494	76.355	1.318					149	59	3	0	0	0	0.846	1	30982	30982		7.2892	2.5332	1	5910500	+		37714	15033	18637	18715	43754	43754					0.1191031955024755
VHLVKAHV	8	Unmodified	_VHLVKAHV_					0	0	0		ENST00000267970.8_1_15:77338989-77339115:-|nuORF	ENST00000267970.8_1_15:77338989-77339115:-|nuORF	ENST00000267970.8_1_15:77338989-77339115:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.7826110720634	2	451.782162	901.549771	1.5821	0.00071478	-2.7426	-0.0012391	-1.1605	-0.00052428	451.7806213585282	68.04	0.88654	68.04	67.85	68.737	0					41	27	2	0	0	0	0.89176	1	28302	28302		0.79363	0	1	1297300			37715	5662	18638	18716	43755	43755					0.09505805096500808
VHLVLRWLRQL	11	Unmodified	_VHLVLRWLRQL_					0	0	0			REV__ENST00000558966.5_1_15:44719997-44751301:+|nuORF	REV__ENST00000558966.5_1_15:44719997-44751301:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	716.9484130740166	2	716.948613	1431.88267	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.022	1	20.216	19.716	20.716	0.19342								0	0	0	0.63775	1	8319	8319		1.4819	0.28856	1		+		37716	13887	18639	18717	43756	43756					0.18400679430101263
VHMGEAAR	8	Unmodified	_VHMGEAAR_					0	0	0		sp|P09701|US23_HCMVATegumentproteinUS23OS=Humancytomegalovirus(strainAD169)OX=10360GN=US23PE=3SV=2;sp|F5HAZ3|US23_HCMVMProteinUS23OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US23PE=3SV=1	sp|P09701|US23_HCMVATegumentproteinUS23OS=Humancytomegalovirus(strainAD169)OX=10360GN=US23PE=3SV=2	sp|P09701|US23_HCMVATegumentproteinUS23OS=Humancytomegalovirus(strainAD169)OX=10360GN=US23PE=3SV=2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7179748415947	2	435.716162	869.41777	0.90325	0.00039356	2.7273	0.0011883	3.6306	0.0015819	435.71760398288694	30.228	0.3382	32.043	31.83	32.169	1.8151					15	10	3	0	0	0	0.54738	1	12674	12674		44.407	19.733	1	716520			37717	15973	18640	18718	43757	43757					-0.022161679827490843
VHNVILCKILS	11	Unmodified	_VHNVILCKILS_					0	0	0			REV__ENST00000441788.6_1_19:3534900-3535248:+|nuORF	REV__ENST00000441788.6_1_19:3534900-3535248:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8674194216728	2	619.868108	1237.72166	2.1605	0.0013392	1.6995	0.0010535	3.86	0.0023927	619.8688226108452	75.929	0.74268	75.929	75.723	76.466	0					48	23	3	0	0	0	1.0357	1	31757	31757		1.4819	0	1	1040800	+		37718	13088	18641	18719	43758	43758					0.11231169001894159
VHPEVSLVI	9	Unmodified	_VHPEVSLVI_					0	0	0		tr|A0A7D7A3I4|A0A7D7A3I4_9CLOTIron-responsiveprotein-likeOS=ClostridiumintestinaleOX=36845GN=HZF06_21905PE=4SV=1	tr|A0A7D7A3I4|A0A7D7A3I4_9CLOTIron-responsiveprotein-likeOS=ClostridiumintestinaleOX=36845GN=HZF06_21905PE=4SV=1	tr|A0A7D7A3I4|A0A7D7A3I4_9CLOTIron-responsiveprotein-likeOS=ClostridiumintestinaleOX=36845GN=HZF06_21905PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7943298220634	2	496.792392	991.570232	1.2952	0.00064344	1.2409	0.00061647	2.5361	0.0012599	496.79322665095947	38.964	0.45123	40.801	40.493	40.944	1.8366					21	13	2	0	0	0	0.15478	1	16345	16345		38.151	7.9264	1	2022400			37719	17276	18642	18720	43759	43759					0.07410930965670559
VHPFHLLV	8	Unmodified	_VHPFHLLV_					0	0	0		CON__Q3SZH5	CON__Q3SZH5	CON__Q3SZH5	MSMS	GG20161007_CRH_Patient100_W632_02	4	481.2861205935478	2	481.284537	960.554522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.516	1	89.011	88.511	89.511	1.4953								0	0	0	1.0178	1	36895	36895		0.79363	0	1			+	37720	358	18643	18721	43760	43760					0.07266689239270363
VHPIGYYDAQK	11	Unmodified	_VHPIGYYDAQK_					0	0	0		nc|ENSG00000086205|Q04609-6|FOLH1;nc|ENSG00000086205|Q04609-3|FOLH1;nc|ENSG00000086205|Q04609-9|FOLH1;nc|ENSG00000086205|Q04609-8|FOLH1;nc|ENSG00000086205|Q04609-7|FOLH1;ENSG00000086205|ENST00000256999|FOLH1	nc|ENSG00000086205|Q04609-6|FOLH1	nc|ENSG00000086205|Q04609-6|FOLH1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.241	1	20.3	19.8	20.8	1.0585								0	0	0	0.63775	1	8016	8016		0.50596	0.23694	1				37721	1071	18644	18722	43761	43761					0.0072018456346540916
VHPISTMIGGI	11	Unmodified	_VHPISTMIGGI_					0	0	0		ENST00000437325.2_1_1:235902019-235902286:+|nuORF	ENST00000437325.2_1_1:235902019-235902286:+|nuORF	ENST00000437325.2_1_1:235902019-235902286:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	562.3107177615166	2	562.810259	1123.60597	2.8091	0.001581	1.2611	0.00070977	4.0703	0.0022908	562.8108303790368	69.865	0.28689	71.703	71.562	71.849	1.8378					15	8	2	0	0	0	0.14342	1	29303	29303		19.257	3.4098	1	2379500			37722	6538	18645	18723	43762	43762					0.04910645151016979
VHPLFFWFWSF	11	Unmodified	_VHPLFFWFWSF_					0	0	0		nc|ENSG00000181264|Q6ZRR5-4|TLCD5;nc|ENSG00000181264|Q6ZRR5-3|TLCD5	nc|ENSG00000181264|Q6ZRR5-4|TLCD5	nc|ENSG00000181264|Q6ZRR5-4|TLCD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.9213744997978	3	504.920286	1511.73903	0.021717	1.0965E-05	1.6722	0.00084432	1.6939	0.00085529	504.9212972702918	12.557	0.30526	13.345	13.152	13.458	0.78751					31	9	5	0	0	0	0.96769	1	5174	5174		2.6312	0.70373	1	3337700			37723	7939	18646	18724	43763	43763					0.0036283259917126998
VHPLPFHP	8	Unmodified	_VHPLPFHP_					0	0	0			REV__ENST00000343815.10_1_1:154235724-154235955:+|nuORF	REV__ENST00000343815.10_1_1:154235724-154235955:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1745483279228	3	315.176467	942.507572	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5833	1	6.2045	5.7045	6.7045	0.62127								0	0	0	1.0178	1	2305	2305		0.45834	0	1		+		37724	12513	18647	18725	43764	43764					0.034018296881413335
VHPLPLRP	8	Unmodified	_VHPLPLRP_					0	0	0			REV__NFKBIE|p.H409Rfs*32|1|0.06|ENSG00000146232|chr6:44260256-44260257|-/ACAGAATATCCGAGTTAGGAGGGACCCTT|frameshift_variant	REV__NFKBIE|p.H409Rfs*32|1|0.06|ENSG00000146232|chr6:44260256-44260257|-/ACAGAATATCCGAGTTAGGAGGGACCCTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	464.7906982302666	2	464.789987	927.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.41	1	21.633	21.133	22.133	0.223								0	0	0	1.0178	1	8899	8899		0.79363	0	1		+		37725	10296	18648	18726	43765	43765					0.09874091613562541
VHPMRRNV	8	Unmodified	_VHPMRRNV_					0	0	0			REV__ENSG00000174373|ENST00000680220|RALGAPA1	REV__ENSG00000174373|ENST00000680220|RALGAPA1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	504.3018981814384	2	504.779628	1007.5447	2.0249	0.0010221	-3.5513	-0.0017926	-1.5264	-0.0007705	504.7802665532222	48.376	0.27713	50.353	50.206	50.483	1.9772					17	8	3	0	0	0	2.3239	1	20222	20222		6.3541	4.2944	1	1368300	+		37726	11121	18649	18727	43766	43766					0.041231779622535214
VHPTCSGS	8	Unmodified	_VHPTCSGS_					0	0	0		RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant;nc|ENSG00000198838|Q15413-3|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;ENSG00000198838|ENST00000634891|RYR3	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	394.1750976443291	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.839	1	18.839	18.339	19.339	0								0	0	0	1.0178	1	7830	7830		0.79363	0	1				37727	5091	18650	18728	43767	43767					-0.06867538519350092
VHPTCSGS	8	Unmodified	_VHPTCSGS_					0	0	0		RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant;nc|ENSG00000198838|Q15413-3|RYR3;nc|ENSG00000198838|Q15413-2|RYR3;ENSG00000198838|ENST00000634891|RYR3	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	RYR3|p.L1996Rfs*16|1|0.04|ENSG00000198838|chr15:33696344-33696344|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.1749755740166	2	394.173795	786.333038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.893	1	20.341	19.841	20.841	1.448								0	0	0	1.0178	1	7855	7855		0.79363	0	1				37728	5091	18650	18728	43768	43768					-0.06867538519350092
VHQEPHEREL	10	Unmodified	_VHQEPHEREL_					0	0	0			REV__nc|ENSG00000107290|Q7Z333-3|SETX	REV__nc|ENSG00000107290|Q7Z333-3|SETX	MSMS	GG20161007_CRH_Patient100_A02_02	2	425.2168456912041	3	425.214309	1272.6211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.502	1	88.737	88.237	89.237	0.23471								0	0	0	0.66176	1	37109	37109		0.62683	0.21856	1		+		37729	9228	18651	18729	43769	43769					-0.004307717274286915
VHQKGFGF	8	Unmodified	_VHQKGFGF_					0	0	0		tr|A0A7D6VYY6|A0A7D6VYY6_9CLOTRibonucleaseROS=ClostridiumintestinaleOX=36845GN=rnrPE=3SV=1	tr|A0A7D6VYY6|A0A7D6VYY6_9CLOTRibonucleaseROS=ClostridiumintestinaleOX=36845GN=rnrPE=3SV=1	tr|A0A7D6VYY6|A0A7D6VYY6_9CLOTRibonucleaseROS=ClostridiumintestinaleOX=36845GN=rnrPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1646606326103	3	307.164339	918.471186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.1	1	105.26	104.76	105.76	0.16679								0	0	0	1.0178	1	44622	44622		0.45834	0	1				37730	17004	18652	18730	43770	43770					0.008689527914384598
VHRDFDDR	8	Unmodified	_VHRDFDDR_					0	0	0		ENSG00000213079|ENST00000367178|SCAF8;nc|ENSG00000213079|Q9UPN6-2|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	ENSG00000213079|ENST00000367178|SCAF8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	530.2163574099541	2	530.251954	1058.48936	0.76362	0.00040491	1.828	0.00096929	2.5916	0.0013742	530.25329307076	20.97	0.1855	21.18	21.072	21.257	0.21024					9	5	2	0	0	0	2.3239	1	8703	8703		23.148	8.5667	1	327270			37731	5212	18653	18731	43771	43771					-0.03754957024534633
VHRFFDMFELR	11	Unmodified	_VHRFFDMFELR_					0	0	0			REV__tr|A0A7D6ZYY9|A0A7D6ZYY9_9CLOTTerBfamilytelluriteresistanceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04285PE=4SV=1	REV__tr|A0A7D6ZYY9|A0A7D6ZYY9_9CLOTTerBfamilytelluriteresistanceproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04285PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	499.8874084353447	3	499.587089	1495.73944	0.1419	7.0889E-05	3.4174	0.0017073	3.5593	0.0017782	499.58905354536887	14.919	0.21995	15.688	15.55	15.77	0.76937					17	6	4	0	0	0	0.14606	1	6217	6217		1.3296	0.92138	1	1506600	+		37732	15785	18654	18732	43772	43772					0.01139884256735968
VHRFRLRQLT	10	Unmodified	_VHRFRLRQLT_					0	0	0			REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.3986083865166	2	663.399287	1324.78402	2.4476	0.0016237	-2.0357	-0.0013505	0.41192	0.00027327	663.3984894087744	91.027	0.28172	91.027	90.812	91.094	0					13	8	2	0	0	0	0.89803	1	38022	38022		0.45834	0.057624	1	326050	+		37733	12414	18655	18733	43773	43773					0.13462076185055594
VHRFRLRQLT	10	Unmodified	_VHRFRLRQLT_					0	0	0			REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	663.399287	1324.78402	2.4476	0.0016237	-2.0357	-0.0013505	0.41192	0.00027327	663.3984894087744	91.027	0.28172	91.027	90.812	91.094	0	-0.025817	-0.00043818	NaN	0.45834	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	326050	+		37734	12414	18655	18733							0.13462076185055594
VHRFRLRQLT	10	Unmodified	_VHRFRLRQLT_					0	0	0			REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	REV__ENST00000322684.7_1_17:55334869-55335675:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	663.399287	1324.78402	2.5633	0.0017005	-1.3382	-0.00088774	1.2252	0.00081279	663.398856955421	90.87	0.3239	91.079	90.932	91.256	0.20904	0.025817	0.00048725	NaN	0.45834	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	473840	+		37735	12414	18655	18733							0.13462076185055594
VHRHRRLS	8	Unmodified	_VHRHRRLS_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.2165405154228	2	530.81539	1059.61623	1.8636	0.00098924	2.4757	0.0013141	4.3393	0.0023034	530.8167236370836	43.434	0.22242	43.434	43.333	43.556	0					11	6	2	0	0	0	2.3239	1	18143	18143		2.5775	0	1	392110	+		37736	11677	18656	18734	43774	43774					0.0888043371112417
VHRKGFREQIK	11	Unmodified	_VHRKGFREQIK_					0	0	0			REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	699.4081298708916	2	699.409852	1396.80515	2.8079	0.0019638	-3.5337	-0.0024715	-0.72587	-0.00050768	699.4062851927833	87.274	1.3786	87.274	86.955	88.334	0					73	49	3	0	0	0	1.0362	1	36894	36894		1.3295	0.92882	1	5976500	+		37737	14808	18657	18735	43775	43775					0.12262041493931974
VHRKGFREQIK	11	Unmodified	_VHRKGFREQIK_					0	0	0			REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	699.409852	1396.80515	3.0677	0.0021456	-3.1299	-0.0021891	-0.062242	-4.3532E-05	699.4082191856257	86.402	0.39032	87.529	87.462	87.853	1.1265	0.094412	-0.00039324	NaN	1.3295	31	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6433100	+		37738	14808	18657	18735							0.12262041493931974
VHRKGFREQIK	11	Unmodified	_VHRKGFREQIK_					0	0	0			REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	REV__tr|A0A553SHQ6|A0A553SHQ6_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_13415PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	699.409852	1396.80515	3.2319	0.0022605	-2.9567	-0.0020679	0.27526	0.00019252	699.4074573132099	86.027	0.41764	87.574	87.512	87.929	1.547	0.13962	-0.00015089	NaN	1.3295	25	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3011700	+		37739	14808	18657	18735							0.12262041493931974
VHRLRLPL	8	Unmodified	_VHRLRLPL_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MSMS	GG20161007_CRH_Patient100_A02_02	2	335.2223693728447	3	335.222299	1002.64507	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.97	1	102.04	101.54	102.54	0.062805								0	0	0	1.0178	1	42696	42696		0.45834	0	1				37740	4478	18658	18736	43776	43776					0.14385158287552713
VHRLRQRRRER	11	Unmodified	_VHRLRQRRRER_					0	0	0		ENST00000467659.1_1_22:19029254-19044511:-|nuORF;nc|ENSG00000070413|P98153-2|DGCR2;ENSG00000070413|ENST00000263196|DGCR2	ENST00000467659.1_1_22:19029254-19044511:-|nuORF	ENST00000467659.1_1_22:19029254-19044511:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2853271365166	4	391.239724	1560.92979	2.6576	0.0010398	0.61961	0.00024242	3.2772	0.0012822	391.23991469638685	91.256	0.45476	91.447	91.205	91.66	0.19041					19	13	2	0	0	0	0.14606	1	38154	38154		0	0	1	510310			37741	852	18659	18737	43777	43777					0.171763517538011
VHRRELHV	8	Unmodified	_VHRRELHV_					0	0	0			REV__ENST00000436105.1_1_7:43549553-43549670:-|nuORF	REV__ENST00000436105.1_1_7:43549553-43549670:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3044921755791	2	523.304324	1044.5941	2.734	0.0014307	-1.7844	-0.00093378	0.94961	0.00049694	523.3033076828397	85.17	0.43631	85.422	85.196	85.632	0.25227					38	13	4	0	0	0	0.89176	1	35664	35664		0.79363	0	1	6066900	+		37742	13049	18660	18738	43778	43778					0.07358209242693192
VHRRRPLE	8	Unmodified	_VHRRRPLE_					0	0	0		ENST00000418304.1_3_1:235490262-235491379:-|nuORF	ENST00000418304.1_3_1:235490262-235491379:-|nuORF	ENST00000418304.1_3_1:235490262-235491379:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.8185302615166	2	531.817599	1061.62064	1.4276	0.00075924	-0.20143	-0.00010712	1.2262	0.00065212	531.8172769714151	69.977	2.2092	70.299	69.188	71.397	0.32223					174	70	4	0	0	0	0.89176	1	29149	29149		0.79363	0	1	4584400			37743	6423	18661	18739	43779	43779					0.09229898134026371
VHRTWKKFHD	10	Unmodified	_VHRTWKKFHD_					0	0	0		L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|92|3|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|92|3|sense	L1PA15_dup4761|chrX:56137796-56140776:+|1.2704796762244717|0.2808252408673861|2.18|428.0|92|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9113952517509	3	451.910672	1352.71019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.635	1	43.959	43.459	44.459	0.32389								0	0	0	0.66254	1	18319	18319		0.15932	0	1				37744	7742	18662	18740	43780	43780					0.04794108022747423
VHSNPGDP	8	Unmodified	_VHSNPGDP_					0	0	0		ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	ENSG00000198677|ENST00000358746|SKIC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	822.3730956912041	1	822.374057	821.366781	2.7674	0.0022758	-3.7952	-0.0031211	-1.0278	-0.00084525	822.370658132706	103.11	0.1963	103.17	103.1	103.3	0.062805					12	6	2	0	0	0	0.88587	1	43221	43221		5.2307	0	1	4234600			37745	5065	18663	18741	43781	43781					-0.05104793755947412
VHSQTMAK	8	Unmodified	_VHSQTMAK_					0	0	0		nc|ENSG00000103363|Q15370-2|ELOB	nc|ENSG00000103363|Q15370-2|ELOB	nc|ENSG00000103363|Q15370-2|ELOB	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.2308837771416	2	451.231645	900.448736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.043	1	30.329	29.829	30.829	0.2859								0	0	0	1.0178	1	12585	12585		18.135	3.5533	1				37746	7844	18664	18742	43782	43782					-0.005470146685070176
VHTFKSNKY	9	Unmodified	_VHTFKSNKY_					0	0	0		tr|A0A553SLM1|A0A553SLM1_NIACIDUF3885domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20920PE=4SV=1	tr|A0A553SLM1|A0A553SLM1_NIACIDUF3885domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20920PE=4SV=1	tr|A0A553SLM1|A0A553SLM1_NIACIDUF3885domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20920PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3010742068291	2	562.298373	1122.58219	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.258	1	47.258	46.758	47.758	0								0	0	0	0.42693	1	19747	19747		2.0598	0.21551	1				37747	16342	18665	18743	43783	43783					0.025805477088624684
VHTKKKAIRKR	11	Unmodified	_VHTKKKAIRKR_					0	0	0			REV__ENSG00000132718|ENST00000368324|SYT11	REV__ENSG00000132718|ENST00000368324|SYT11	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	341.1795837283134	4	341.979482	1363.88882	0.022691	7.7598E-06	3.4745	0.0011882	3.4972	0.001196	341.9809313105496	22.368	0.39581	23.983	23.8	24.196	1.6158					16	12	2	0	0	0	0.14606	1	9304	9304		0.094841	0.094841	1	537380	+		37748	9859	18666	18744	43784	43784					0.22143197661603153
VHTKKKAIRKR	11	Unmodified	_VHTKKKAIRKR_					0	0	0			REV__ENSG00000132718|ENST00000368324|SYT11	REV__ENSG00000132718|ENST00000368324|SYT11	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	341.979482	1363.88882	0.33293	0.00011385	1.2968	0.00044347	1.6297	0.00055733	342.2299984873908	23.97	0.18492	24.212	24.073	24.257	0.24251	0.11433	-0.0025362	NaN	0.094841	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	151910	+		37749	9859	18666	18744							0.22143197661603153
VHVAPDEVL	9	Unmodified	_VHVAPDEVL_					0	0	0			REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	489.7675964236259	2	489.766374	977.518196	2.3726	0.001162	-1.7825	-0.00087301	0.59006	0.00028899	489.76578439443716	39.494	0.59127	40.805	40.586	41.177	1.3102					40	19	3	0	0	0	0.39097	2	16532	16532;16621		20.871	9.7567	1	4847900	+		37750	13301	18667	18745	43785;43786	43785					0.028537675519032746
VHVAPDEVL	9	Unmodified	_VHVAPDEVL_					0	0	0			REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.7676879763603	2	489.766374	977.518196	1.4714	0.00072063	-1.5017	-0.00073547	-0.030291	-1.4836E-05	489.7660350219277	38.968	0.53889	40.805	40.558	41.097	1.8366					33	16	3	0	0	0	0.13437	3	16342	16295;16342;16395		40.449	10.224	1	3363400	+		37751	13301	18667	18745	43787;43788;43789	43788					0.028537675519032746
VHVAPDEVL	9	Unmodified	_VHVAPDEVL_					0	0	0			REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	REV__ENST00000473262.5_1_3:124837626-124909342:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	489.766374	977.518196	1.4714	0.00072063	-1.5017	-0.00073547	-0.030291	-1.4836E-05	489.7660350219277	38.968	0.53889	40.805	40.558	41.097	1.8366	-1.2185E-05	0.00014277	NaN	40.449	33	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3363400	+		37752	13301	18667	18745							0.028537675519032746
VHVDKRPR	8	Unmodified	_VHVDKRPR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;TTN|p.T6904Lfs*6|1|0.08|ENSG00000155657|chr2:178723439-178723439|T/-|frameshift_variant;TTN|p.V5150Afs*3|1|0.06|ENSG00000155657|chr2:178732661-178732661|A/-|frameshift_variant;TTN|p.R4157*|1|0.07|ENSG00000155657|chr2:178739814-178739815|-/C|frameshift_variant;TTN|p.L3483Ifs*33|1|0.11|ENSG00000155657|chr2:178741835-178741836|-/AT|frameshift_variant;nc|ENSG00000155657|Q8WZ42-6|TTN;TTN|p.E3802Dfs*59|1|0.05|ENSG00000155657|chr2:178740876-178740877|-/GAAGTAACAAGGTACATGCACATGATGTG|frameshift_variant;TTN|p.L962Efs*29|1|0.14|ENSG00000155657|chr2:178783023-178783024|-/AACCTCA|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN;TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2026855349541	3	336.201675	1005.5832	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.959	1	22.182	21.682	22.682	0.223								0	0	0	1.0178	1	9136	9136		0.45834	0	1				37753	3425;7900;17346	18668	18746	43790	43790					0.08062806868417738
VHWITFLM	8	Unmodified	_VHWITFLM_					0	0	0			REV__chr5:124062510-124213455|90|11.21|0.0|12.03|-|2|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|76	REV__chr5:124062510-124213455|90|11.21|0.0|12.03|-|2|TE_info:L1PA4,L1PA4_dup4151,L1,LINE,donor,+,124213455,124219314|LINC01170,None|76	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.7761718630791	2	523.778231	1045.54191	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.93	1	112.97	112.47	113.47	0.044189								0	0	0	1.0178	1	48653	48653		5.7604	0	1		+		37754	8327	18669	18747	43791	43791					0.020959097847025987
VHWVSVGK	8	Unmodified	_VHWVSVGK_					0	0	0		nc|ENSG00000120868|O14727-5|APAF1;nc|ENSG00000120868|O14727-3|APAF1;nc|ENSG00000120868|O14727-4|APAF1;nc|ENSG00000120868|O14727-2|APAF1;ENSG00000120868|ENST00000551964|APAF1;nc|ENSG00000120868|O14727-6|APAF1	nc|ENSG00000120868|O14727-5|APAF1	nc|ENSG00000120868|O14727-5|APAF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	456.2605773806572	2	456.25852	910.502486	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.596	1	29.875	29.375	30.375	0.2793								0	0	0	1.0178	1	12392	12392		0.79363	0	1				37755	2120	18670	18748	43792	43792					0.043655258255284934
VIAEILRGV	9	Unmodified	_VIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.3086425662041	2	485.30821	968.601866	1.9723	0.00095719	-0.12014	-5.8307E-05	1.8522	0.00089889	485.3081175450842	53.536	0.53936	53.536	53.365	53.905	0					40	16	4	0	0	0	0.033504	2	22325	22325;22363		81.89	6.9612	1	11342000			37756	1340	18671	18749	43793;43794	43793					0.11630923719633302
VIAEILRGV	9	Unmodified	_VIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.3086120486259	2	485.30821	968.601866	2.516	0.0012211	-1.1579	-0.00056193	1.3582	0.00065913	485.3075915554797	52.919	0.48944	53.242	53.046	53.536	0.32283					36	15	3	0	0	0	0.053939	3	22171	22128;22171;22213		66.457	14.827	1	12465000			37757	1340	18671	18749	43795;43796;43797	43796					0.11630923719633302
VIAEILRGV	9	Unmodified	_VIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.3080627322197	2	485.30821	968.601866	0.92834	0.00045053	-1.1466	-0.00055647	-0.21829	-0.00010594	485.3074725447949	51.632	0.5881	53.028	52.807	53.395	1.3966					48	20	4	0	0	0	0.063746	3	21668	21573;21621;21668		62.573	6.3957	1	34857000			37758	1340	18671	18749	43798;43799;43800	43800					0.11630923719633302
VIAEILRGV	9	Unmodified	_VIAEILRGV_					0	0	0		ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	ENSG00000101361|ENST00000329276|NOP56	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3071166872978	2	485.30821	968.601866	-0.33396	-0.00016207	-0.82313	-0.00039947	-1.1571	-0.00056154	485.3076958137449	51.061	0.58148	53.037	52.757	53.339	1.9753					46	22	3	0	0	0	0.040497	3	21374	21330;21374;21415		75.761	19.584	1	24487000			37759	1340	18671	18749	43801;43802;43803	43802					0.11630923719633302
VIAPGAKA	8	Unmodified	_VIAPGAKA_					0	0	0		ENSG00000084674|ENST00000233242|APOB;APOB|p.R4105Sfs*16|1|0.41|ENSG00000084674|chr2:21003083-21003107|CTCAGCATTGTTCTGCAGATTTCTT/-|frameshift_variant;APOB|p.P1331Gfs*27|1|0.03|ENSG00000084674|chr2:21013386-21013387|-/CA|frameshift_variant;APOB|p.S1889Afs*52|1|0.08|ENSG00000084674|chr2:21011204-21011205|-/GGGCTTCTCAACGGCATCTCTCATCTCTAAAGCA|frameshift_variant;APOB|p.S1969Rfs*50|1|0.08|ENSG00000084674|chr2:21010961-21010962|-/GC|frameshift_variant;APOB|p.N3224Tfs*50|1|0.31|ENSG00000084674|chr2:21007197-21007198|-/CTTCTTCATATTCTGCACTGAAG|frameshift_variant	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2537109255791	2	363.729064	725.443575	1.7517	0.00063713	1.2209	0.00044408	2.9726	0.0010812	363.72799338962363	62.269	0.81371	63.686	63.206	64.02	1.4177					35	25	2	0	0	0	2.3239	1	26160	26160		0	0	1	1110800			37760	1053	18672	18750	43804	43804					0.06987049531187495
VIAQRISTVKH	11	Unmodified	_VIAQRISTVKH_					0	0	0			REV__tr|A0A553SLJ6|A0A553SLJ6_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20775PE=4SV=1	REV__tr|A0A553SLJ6|A0A553SLJ6_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20775PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6927368044853	4	313.693753	1250.7459	-2.6816	-0.00084121	-0.61662	-0.00019343	-3.2983	-0.0010346	313.6935487403373	31.121	0.66912	31.121	30.896	31.565	0					98	21	5	0	0	0	1.0282	1	12992	12992		2.084	0.62885	1	20258000	+		37761	14986	18673	18751	43805	43805					0.13056145479754377
VIAVFSVLA	9	Unmodified	_VIAVFSVLA_					0	0	0		tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	918.5654174685478	1	918.565881	917.558604	1.8488	0.0016983	0.88248	0.00081062	2.7313	0.0025089	918.5663846416262	93.122	0.37431	93.122	92.953	93.327	0					20	11	2	0	0	0	0.13437	1	38895	38895		40.449	3.9824	1	1562700			37762	16900	18674	18752	43806	43806					0.09652733942334635
VIAVFSVLA	9	Unmodified	_VIAVFSVLA_					0	0	0		tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	918.5687133669853	1	918.565881	917.558604	2.7229	0.0025012	-2.35	-0.0021587	0.3729	0.00034253	918.5640458314454	92.695	0.31483	92.863	92.681	92.996	0.16835					16	9	2	0	0	0	0.13437	1	38805	38805		40.449	2.2974	1	619150			37763	16900	18674	18752	43807	43807					0.09652733942334635
VIAVFSVLA	9	Unmodified	_VIAVFSVLA_					0	0	0		tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	tr|A0A7D6VT53|A0A7D6VT53_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_15640PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.5706664919853	1	918.565881	917.558604	3.3575	0.0030841	-0.94619	-0.00086914	2.4113	0.002215	918.564078759282	91.275	0.36298	92.641	92.504	92.867	1.366					18	11	2	0	0	0	0.098957	2	38406	38406;38456		49.669	13.203	1	4261800			37764	16900	18674	18752	43808;43809	43808					0.09652733942334635
VIAVWPQR	8	Unmodified	_VIAVWPQR_					0	0	0			REV__ENST00000538923.1_1_11:94226040-94226943:-|nuORF	REV__ENST00000538923.1_1_11:94226040-94226943:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.7891113162041	2	484.787444	967.560336	1.1886	0.00057623	2.1568	0.0010456	3.3454	0.0016218	484.78831724182015	26.732	0.26648	26.732	26.596	26.862	0					25	8	4	0	0	0	0.88587	1	11148	11148		5.2307	0.47466	1	4570800	+		37765	12420	18675	18753	43810	43810					0.07525787750944346
VICVIVKK	8	Unmodified	_VICVIVKK_					0	0	0			REV__tr|A0A7D6ZHP8|A0A7D6ZHP8_9CLOTDipeptidylpeptidaseIVN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03790PE=4SV=1	REV__tr|A0A7D6ZHP8|A0A7D6ZHP8_9CLOTDipeptidylpeptidaseIVN-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03790PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.2015869021416	3	301.201625	900.583045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.223	1	46.552	46.052	47.052	0.32899								0	0	0	1.0178	1	19398	19398		0.45834	0	1		+		37766	15654	18676	18754	43811	43811					0.12877670824195775
VICVVLLWHI	10	Unmodified	_VICVVLLWHI_					0	0	0			REV__ENST00000233099.5_1_2:37268352-37268403:-|nuORF	REV__ENST00000233099.5_1_2:37268352-37268403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8582641482353	2	597.857012	1193.69947	2.5642	0.001533	-0.57064	-0.00034116	1.9935	0.0011918	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.89646	1	32624	32624		1.8442	0	1	10594000	+		37767	12104	18677	18755	43812	43812					0.11036989324111346
VICVVLLWHI	10	Unmodified	_VICVVLLWHI_					0	0	0			REV__ENST00000233099.5_1_2:37268352-37268403:-|nuORF	REV__ENST00000233099.5_1_2:37268352-37268403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8579589724541	2	597.857012	1193.69947	2.7426	0.0016397	-1.3901	-0.00083108	1.3525	0.00080858	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.89646	1	32272	32272		1.8442	0	1	9838100	+		37768	12104	18677	18755	43813	43813					0.11036989324111346
VIDEEIKK	8	Unmodified	_VIDEEIKK_					0	0	0		ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	ENSG00000186838|ENST00000335426|SELENOV	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	487.2399474978447	2	487.281857	972.549162	1.6584	0.00080812	0.42364	0.00020643	2.0821	0.0010146	487.28203953026565	40.534	0.94254	40.534	40.299	41.241	0					63	29	4	0	0	0	2.3239	1	17047	17047		19.257	0	1	17831000			37769	4807	18678	18756	43814	43814					0.06178920866148019
VIDEFKVLQ	9	Unmodified	_VIDEFKVLQ_					0	0	0			REV__ENSG00000171451|ENST00000310045|DSEL	REV__ENSG00000171451|ENST00000310045|DSEL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.3329955935478	2	545.810782	1089.60701	2.7407	0.0014959	-3.7928	-0.0020702	-1.0521	-0.00057426	545.8085906053822	73.474	0.27963	75.27	75.224	75.503	1.7962					10	8	2	0	0	0	0.097511	1	30843	30843		16.942	2.104	1	757200	+		37770	11025	18679	18757	43815	43815					0.06579182791574567
VIDIHTLRI	9	Unmodified	_VIDIHTLRI_					0	0	0		ENSG00000164484|ENST00000296978|TMEM200A	ENSG00000164484|ENST00000296978|TMEM200A	ENSG00000164484|ENST00000296978|TMEM200A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3303100466728	2	540.332216	1078.64988	1.4108	0.00076229	-1.7112	-0.00092459	-0.30037	-0.0001623	540.3312259445505	70.558	0.78256	70.88	70.647	71.429	0.32223					63	24	3	0	0	0	0.76456	1	29469	29469		4.756	0.81161	1	2526700			37771	3780	18680	18758	43816	43816					0.11369997639667417
VIDLADKVT	9	Unmodified	_VIDLADKVT_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2828552126884	2	487.281857	972.549162	1.6584	0.00080812	0.42364	0.00020643	2.0821	0.0010146	487.28203953026565	40.534	0.94254	40.534	40.299	41.241	0					63	29	4	0	0	0	0.086433	1	16971	16971		53.833	0	1	17831000	+		37772	11375	18681	18759	43817	43817					0.06178920866148019
VIDWKENV	8	Unmodified	_VIDWKENV_					0	0	0		L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|49|1|sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|49|1|sense	L1PA7_dup8181|chrX:79196566-79201431:+|5.519659473189785|0.01783793769257|8.27|429.0|49|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.7680236697197	2	501.766374	1001.5182	1.9806	0.0009938	-0.37147	-0.00018639	1.6091	0.00080741	501.76686379616206	59.281	0.16074	59.281	59.194	59.355	0					7	4	2	0	0	0	0.87803	1	24741	24741		10.183	0.83596	1	749870			37773	7768	18682	18760	43818	43818					0.01749767551905279
VIEGESVIK	9	Unmodified	_VIEGESVIK_					0	0	0		TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2830688357353	2	487.281857	972.549162	2.4004	0.0011697	0.56291	0.00027429	2.9633	0.0014439	487.2819651896642	40.052	0.56366	40.365	40.164	40.728	0.31263					44	17	4	0	0	0	0.079895	1	16870	16870		56.177	6.244	1	7774900			37774	17346	18683	18761	43819	43819					0.0617892086613665
VIEGESVIK	9	Unmodified	_VIEGESVIK_					0	0	0		TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	TTN|p.T961Ifs*17|1|0.06|ENSG00000155657|chr2:178783024-178783025|-/AAGTTTAA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2823669314384	2	487.281857	972.549162	1.9861	0.00096781	-0.52091	-0.00025383	1.4652	0.00071398	487.28127244817597	38.789	0.36305	40.085	39.895	40.258	1.2961					19	11	2	0	0	0	0.073578	1	16278	16278		58.679	0	1	5691000			37775	17346	18683	18761	43820	43820					0.0617892086613665
VIERNRLRTV	10	Unmodified	_VIERNRLRTV_					0	0	0		ENSG00000124251|ENST00000372726|TP53TG5	ENSG00000124251|ENST00000372726|TP53TG5	ENSG00000124251|ENST00000372726|TP53TG5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3163329958916	3	419.257961	1254.75205	2.9438	0.0012342	-1.2627	-0.00052941	1.6811	0.00070481	419.2578376753426	93.655	0.31859	93.8	93.686	94.005	0.14493					18	9	2	0	0	0	0.12561	1	39185	39185		0.15932	0	1	1003500			37776	2221	18684	18762	43821	43821					0.13486663711228175
VIEVIPFLV	9	Unmodified	_VIEVIPFLV_					0	0	0		nc|ENSG00000141458|O15118-2|NPC1;ENSG00000141458|ENST00000269228|NPC1;ENST00000540608.5_1_18:21119776-21166285:-|nuORF	nc|ENSG00000141458|O15118-2|NPC1	nc|ENSG00000141458|O15118-2|NPC1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.3152953982353	2	514.823161	1027.63177	1.458	0.00075061	-3.5109	-0.0018075	-2.0529	-0.0010569	514.8216041679115	71.102	0.42645	72.926	72.639	73.065	1.824					20	13	2	0	0	0	0.10844	1	29772	29772		16.942	0	1	4289100			37777	2962	18685	18763	43822	43822					0.11905862664912092
VIFDLPTTV	9	Unmodified	_VIFDLPTTV_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.7836791872978	2	502.786776	1003.559	2.5087	0.0012613	-0.68011	-0.00034195	1.8285	0.00091937	502.7862087364818	75.948	0.18671	77.715	77.658	77.845	1.7672					11	5	3	0	0	0	0.12174	2	31859	31859;31908		42.095	17.421	1	2326100			37778	679	18686	18764	43823;43824	43823					0.0573610887150835
VIFDLPTTV	9	Unmodified	_VIFDLPTTV_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1004.571643054485	1	1004.56627	1003.559	2.9771	0.0029907	1.9563	0.0019652	4.9334	0.0049559	1004.5705939779194	76	0.24778	77.767	77.597	77.845	1.7672					10	7	2	0	0	0	0.051699	1	31896	31896		67.344	21.323	1	1539900			37779	679	18686	18764	43825	43825					0.0573610887150835
VIFDLPTTV	9	Unmodified	_VIFDLPTTV_					0	0	0		ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	ENSG00000047578|ENST00000261588|KATNIP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	502.786776	1003.559	2.6822	0.0013486	-4.6759	-0.002351	-1.9937	-0.0010024	502.7834629872544	76.524	0.4388	77.817	77.575	78.014	1.2938	0.051187	-0.0035954	NaN	42.095	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2221600			37780	679	18686	18764							0.0573610887150835
VIFGFAHH	8	Unmodified	_VIFGFAHH_					0	0	0		ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	464.1872131228447	2	464.245412	926.476272	1.0078	0.00046785	2.9564	0.0013725	3.9641	0.0018403	464.24646592560765	30.337	0.18592	31.62	31.564	31.75	1.2825					7	5	2	0	0	0	2.3239	1	12733	12733		2.8892	0	1	496160			37781	5622	18687	18765	43826	43826					0.01009256654026558
VIFGFAHH	8	Unmodified	_VIFGFAHH_					0	0	0		ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	464.245412	926.476272	1.6538	0.00076778	-0.43639	-0.00020259	1.2174	0.00056519	464.2448381077238	32.076	0.24568	32.076	31.949	32.194	0	0.20479	-0.0015283	NaN	2.8892	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1022900			37782	5622	18687	18765							0.01009256654026558
VIFGFAHH	8	Unmodified	_VIFGFAHH_					0	0	0		ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	ENST00000261318.4_1_12:117155416-117155572:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	464.245412	926.476272	1.8835	0.00087443	1.8024	0.00083674	3.6859	0.0017112	464.2464364193637	31.626	0.27237	31.917	31.785	32.057	0.29086	0.046147	0.00055034	NaN	2.8892	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678390			37783	5622	18687	18765							0.01009256654026558
VIFKYAVI	8	Unmodified	_VIFKYAVI_					0	0	0		tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	tr|A0A7D7A1Y3|A0A7D7A1Y3_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14310PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	476.2001830935478	2	476.796946	951.57934	1.9717	0.00094009	-1.4052	-0.00067	0.56647	0.00027009	476.7952318230831	67.434	0.15752	68.812	68.757	68.914	1.3778					5	4	2	0	0	0	2.3239	1	28298	28298		0.79363	0	1	211110			37784	17247	18688	18766	43827	43827					0.10161324321984466
VIFRKSVRKFF	11	Unmodified	_VIFRKSVRKFF_					0	0	0		ACADL|p.D58V|1|0.07|ENSG00000115361|chr2:210220707-210220707|T/A|missense_variant	ACADL|p.D58V|1|0.07|ENSG00000115361|chr2:210220707-210220707|T/A|missense_variant	ACADL|p.D58V|1|0.07|ENSG00000115361|chr2:210220707-210220707|T/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.9385864138603	2	713.937714	1425.86087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.013	1	52.988	52.488	53.488	1.9753								0	0	0	0.63775	1	21377	21377		3.2813	0.28607	1				37785	14	18689	18767	43828	43828					0.16497874681522262
VIGAGKTK	8	Unmodified	_VIGAGKTK_					0	0	0		tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	773.4871703982353	1	773.487965	772.480688	2.5903	0.0020036	-3.4143	-0.002641	-0.82401	-0.00063736	773.4842014480995	104.19	0.080505	104.35	104.3	104.38	0.16055					10	7	2	0	0	0	0.89051	1	44091	44091		2.3027	1.6124	1	27285000			37786	16493	18690	18768	43829	43829					0.08534721076932783
VIGAGKTK	8	Unmodified	_VIGAGKTK_					0	0	0		tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	tr|A0A553SQ25|A0A553SQ25_NIACIDNApolymerasebetaOS=NialliacirculansOX=1397GN=polXPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	773.4863159060478	1	773.487965	772.480688	2.8057	0.0021701	0.047523	3.6759E-05	2.8532	0.0022069	773.4873518633225	104.14	0.055405	104.31	104.28	104.34	0.1731					5	3	2	0	0	0	0.89051	1	44003	44003		2.3027	2.3027	1	20811000			37787	16493	18690	18768	43830	43830					0.08534721076932783
VIGGLTSSTLL	11	Unmodified	_VIGGLTSSTLL_					0	0	0		tr|A0A553SF65|A0A553SF65_NIACIEffluxRNDtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_08280PE=4SV=1	tr|A0A553SF65|A0A553SF65_NIACIEffluxRNDtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_08280PE=4SV=1	tr|A0A553SF65|A0A553SF65_NIACIEffluxRNDtransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_08280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8180419802666	2	530.816064	1059.61758	1.9511	0.0010357	-2.8861	-0.001532	-0.93504	-0.00049633	530.8145629135761	68.579	2.293	70.432	69.441	71.734	1.853					224	73	6	0	0	0	0.89563	1	28812	28812		10.074	1.4806	1	13483000			37788	16043	18691	18769	43831	43831					0.09015165445998718
VIGKQKWL	8	Unmodified	_VIGKQKWL_					0	0	0			REV__tr|A0A553SRY8|A0A553SRY8_NIACIfructose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_02115PE=3SV=1	REV__tr|A0A553SRY8|A0A553SRY8_NIACIfructose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_02115PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3064453005791	2	486.30547	970.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.015	1	65.943	65.443	66.443	1.928								0	0	0	0.90337	1	26859	26859		49.669	0	1		+		37789	15181	18692	18770	43832	43832					0.10991244927799926
VIHKKLKIII	10	Unmodified	_VIHKKLKIII_					0	0	0			REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	REV__tr|A0A7D7A1X8|A0A7D7A1X8_9CLOTVanZfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17365PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	402.2870971560478	3	402.28831	1203.8431	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.83	1	99.83	99.33	100.33	0								0	0	0	0.66264	1	41789	41789		0	0	1		+		37790	15839	18693	18771	43833	43833					0.24933159426677776
VIHKPLSKVK	10	Unmodified	_VIHKPLSKVK_					0	0	0			REV__ENST00000216281.12_1_14:102547440-102547575:-|nuORF	REV__ENST00000216281.12_1_14:102547440-102547575:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8804199099541	2	574.879333	1147.74411	3.1011	0.0017827	-2.3311	-0.0013401	0.77002	0.00044267	574.8779995953846	107.48	0.22772	107.63	107.51	107.73	0.15781					44	11	5	0	0	0	0.89803	1	46193	46193		1.4819	0	1	952280000	+		37791	12069	18694	18772	43834	43834					0.17615136461790826
VIHLITAA	8	Unmodified	_VIHLITAA_					0	0	0		nc|ENSG00000103502|O14735-3|CDIPT;ENSG00000103502|ENST00000219789|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	837.5219604372978	1	837.519265	836.511988	3.0204	0.0025297	-0.062768	-5.2569E-05	2.9577	0.0024771	837.520721463608	107.68	0.16615	107.84	107.75	107.92	0.15795					13	8	2	0	0	0	0.89198	1	46364	46364		0	0	1	17323000			37792	1433	18695	18773	43835	43835					0.08719294111017462
VIHLITAA	8	Unmodified	_VIHLITAA_					0	0	0		nc|ENSG00000103502|O14735-3|CDIPT;ENSG00000103502|ENST00000219789|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	837.519265	836.511988	1.2281	0.0010286	2.93	0.0024539	4.1581	0.0034825	837.5221102383114	107.78	0.21329	107.78	107.65	107.86	0	-0.049819	0.0015447	NaN	0	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10281000			37793	1433	18695	18773							0.08719294111017462
VIHLITAA	8	Unmodified	_VIHLITAA_					0	0	0		nc|ENSG00000103502|O14735-3|CDIPT;ENSG00000103502|ENST00000219789|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	837.519265	836.511988	2.7763	0.0023252	0.22421	0.00018778	3.0005	0.002513	837.5188842959678	107.76	0.19933	107.81	107.69	107.89	0.052452	-0.01284	-0.00072141	NaN	0	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7427600			37794	1433	18695	18773							0.08719294111017462
VIHLITAA	8	Unmodified	_VIHLITAA_					0	0	0		nc|ENSG00000103502|O14735-3|CDIPT;ENSG00000103502|ENST00000219789|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	nc|ENSG00000103502|O14735-3|CDIPT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	837.519265	836.511988	2.8976	0.0024268	1.5348	0.0012854	4.4324	0.0037123	837.5213737164856	107.71	0.14514	107.87	107.79	107.93	0.15781	0.046312	0.00037625	NaN	0	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23838000			37795	1433	18695	18773							0.08719294111017462
VIHLKHFSGYF	11	Unmodified	_VIHLKHFSGYF_					0	0	0			REV__nc|ENSG00000187955|Q05707-3|COL14A1	REV__nc|ENSG00000187955|Q05707-3|COL14A1	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9113952517509	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0843	1	5.7056	5.2056	6.2056	0.62127								0	0	0	0.63775	1	2099	2099		0.094841	0	1		+		37796	14511	18696	18774	43836	43836					0.0540535807674587
VIHLLVNV	8	Unmodified	_VIHLLVNV_					0	0	0		ENSG00000120451|ENST00000265909|SNX19;nc|ENSG00000120451|Q92543-2|SNX19	ENSG00000120451|ENST00000265909|SNX19	ENSG00000120451|ENST00000265909|SNX19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	453.7927429080009	2	453.792195	905.569838	1.2239	0.0005554	-1.8842	-0.00085504	-0.66029	-0.00029964	453.79142394780155	107.8	0.17517	107.8	107.7	107.88	0					24	9	4	0	0	0	0.89178	1	46286	46286		0.69038	0	1	114790000			37797	2105	18697	18775	43837	43837					0.11327556036462738
VIHLPFIV	8	Unmodified	_VIHLPFIV_					0	0	0		ENST00000453595.1_1_X:36980271-36981156:-|nuORF	ENST00000453595.1_1_X:36980271-36981156:-|nuORF	ENST00000453595.1_1_X:36980271-36981156:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	313.2007018923759	3	313.200501	936.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.15	1	102.15	101.65	102.65	0								0	0	0	1.0178	1	42788	42788		1.8442	0	1				37798	6630	18698	18776	43838	43838					0.10884744041857175
VIHRFQPL	8	Unmodified	_VIHRFQPL_					0	0	0		LTR2B_dup112|chr5:139531087-139531564:+|5.616613063847069|0.2101401634115403|4.74|424.0|9|2|sense	LTR2B_dup112|chr5:139531087-139531564:+|5.616613063847069|0.2101401634115403|4.74|424.0|9|2|sense	LTR2B_dup112|chr5:139531087-139531564:+|5.616613063847069|0.2101401634115403|4.74|424.0|9|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3031799197197	2	505.300719	1008.58688	1.8322	0.00092579	2.3866	0.001206	4.2188	0.0021318	505.3017651333909	42.932	0.44827	44.853	44.601	45.049	1.9211					32	14	3	0	0	0	0.62161	1	17953	17953		38.151	7.9264	1	6751200			37799	7786	18699	18777	43839	43839					0.0829347664226816
VIIIITTTTI	10	Unmodified	_VIIIITTTTI_					0	0	0			REV__ENST00000401050.7_1_1:53133125-53134458:+|nuORF	REV__ENST00000401050.7_1_1:53133125-53134458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3527099490166	2	544.352283	1086.69001	3.0607	0.0016661	-0.17185	-9.3545E-05	2.8889	0.0015726	544.3521973595097	107.51	0.24573	107.67	107.54	107.79	0.15781					46	12	5	0	0	0	0.89803	1	46292	46292		0	0	1	1581299999.9999998	+		37800	12884	18700	18778	43840	43840					0.15013499519545803
VIIITILQTSN	11	Unmodified	_VIIITILQTSN_					0	0	0			REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	405.9172241091728	3	405.583339	1213.72819	1.9272	0.00078164	0.053627	2.175E-05	1.9808	0.00080339	405.5834482106852	42.28	0.26938	42.6	42.428	42.697	0.32058					15	8	2	0	0	0	0.67026	1	17739	17739		19.144	3.4053	1	1294600	+		37801	15443	18701	18779	43841	43841					0.12987385434234966
VIIITILQTSN	11	Unmodified	_VIIITILQTSN_					0	0	0			REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	REV__tr|A0A7D6VSD6|A0A7D6VSD6_9CLOTInorganicphosphatetransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_05310PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	405.583339	1213.72819	1.9272	0.00078164	0.053627	2.175E-05	1.9808	0.00080339	405.5834482106852	42.28	0.26938	42.6	42.428	42.697	0.32058	-0.025038	-0.00011872	NaN	19.144	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1294600	+		37802	15443	18701	18779							0.12987385434234966
VIINSHCCCCP	11	Unmodified	_VIINSHCCCCP_					0	0	0		nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	596.2449828982353	2	596.242514	1190.47048	2.3384	0.0013942	1.7618	0.0010504	4.1001	0.0024447	596.243658398558	50.61	0.66539	50.61	50.405	51.071	0					61	20	4	0	0	0	0.85967	2	21077	21077;21127		12.241	1.4167	1	14263000			37803	7824	18702	18780	43842;43843	43842					-0.1171403729811118
VIINSHCCCCP	11	Unmodified	_VIINSHCCCCP_					0	0	0		nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	nc|ENSG00000060237|Q9H4A3-4|WNK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.2452270388603	2	596.242514	1190.47048	1.618	0.00096471	2.1446	0.0012787	3.7626	0.0022434	596.2440343609151	50.139	0.46897	50.469	50.263	50.732	0.33019					30	14	3	0	0	0	0.85967	1	20971	20971		12.241	0.74595	1	5489600			37804	7824	18702	18780	43844	43844					-0.1171403729811118
VIIPIPLAIV	10	Unmodified	_VIIPIPLAIV_					0	0	0			REV__ENSG00000182674|ENST00000523207|KCNB2	REV__ENSG00000182674|ENST00000523207|KCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3630859255791	2	524.362453	1046.71035	2.9242	0.0015333	-1.0431	-0.00054695	1.8811	0.00098638	524.3616007433058	109.44	0.49236	109.49	109.29	109.78	0.048843					40	19	3	0	0	0	0.89803	2	47196	47196;47267		0	0	1	9099700	+		37805	11360	18703	18781	43845;43846	43845					0.18886714970017238
VIIRSQFDGI	10	Unmodified	_VIIRSQFDGI_					0	0	0		ENSG00000222018|ENST00000410005|C21orf140	ENSG00000222018|ENST00000410005|C21orf140	ENSG00000222018|ENST00000410005|C21orf140	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.3293945193291	2	574.327131	1146.63971	1.9946	0.0011456	3.527	0.0020257	5.5216	0.0031712	574.3282714762148	82.543	0.33984	82.543	82.337	82.677	0					27	10	3	0	0	0	0.5476	1	34394	34394		25.399	0	1	1694900			37806	5280	18704	18782	43847	43847					0.0722538991442434
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4772827029228	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.91	1	112.91	112.41	113.41	0								0	0	0	0.63775	1	48800	48800		0.30703	0	1		+		37807	9919	18705	18783	43848	43848					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4778320193291	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.18	1	113.18	112.68	113.68	0								0	0	0	0.63775	1	48904	48904		0.30703	0	1		+		37808	9919	18705	18783	43849	43849					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4795410037041	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.6	1	113.6	113.1	114.1	0								0	0	0	0.63775	1	49073	49073		0.30703	0	1		+		37809	9919	18705	18783	43850	43850					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4757568240166	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.92	1	113.92	113.42	114.42	0								0	0	0	0.63775	1	49203	49203		0.30703	0	1		+		37810	9919	18705	18783	43851	43851					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4802123904228	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.05	1	114.05	113.55	114.55	0								0	0	0	0.63775	1	49255	49255		0.30703	0	1		+		37811	9919	18705	18783	43852	43852					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4797851443291	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.52	1	114.52	114.02	115.02	0								0	0	0	0.63775	1	49441	49441		0.30703	0	1		+		37812	9919	18705	18783	43853	43853					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_02	2	705.4835082888603	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.86	1	112.91	112.41	113.41	0.044189								0	0	0	0.63775	1	48628	48628		0.30703	0	1		+		37813	9919	18705	18783	43854	43854					0.25855459587046425
VIISLLRRRKR	11	Unmodified	_VIISLLRRRKR_					0	0	0			REV__ENSG00000134817|ENST00000606794|APLNR	REV__ENSG00000134817|ENST00000606794|APLNR	MSMS	GG20161007_CRH_Patient100_A02_02	2	705.4799072146416	2	705.480611	1408.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.6	1	113.65	113.15	114.15	0.044189								0	0	0	0.63775	1	48926	48926		0.30703	0	1		+		37814	9919	18705	18783	43855	43855					0.25855459587046425
VIITGTPIIP	10	Unmodified	_VIITGTPIIP_					0	0	0		ENST00000598164.2_1_19:40172096-40174784:+|nuORF;ENST00000412609.5_1_19:40170059-40174276:+|nuORF	ENST00000598164.2_1_19:40172096-40174784:+|nuORF	ENST00000598164.2_1_19:40172096-40174784:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	342.0549194216728	3	341.886471	1022.63758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.969	1	34.794	34.294	35.294	1.8246								0	0	0	0.66035	1	13820	13820		3.8763	1.5936	1				37815	6389	18706	18784	43856	43856					0.12716961176613495
VIIWQVDP	8	Unmodified	_VIIWQVDP_					0	0	0		ENST00000486652.5_1_1:224588736-224599215:-|nuORF	ENST00000486652.5_1_1:224588736-224599215:-|nuORF	ENST00000486652.5_1_1:224588736-224599215:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2756835818291	2	485.273835	968.533118	2.7118	0.0013159	1.764	0.00085602	4.4758	0.002172	485.2741179307927	78.385	0.36685	79.652	79.481	79.848	1.2668					22	11	3	0	0	0	0.87106	1	32885	32885		14.582	0	1	2672600			37816	6866	18707	18785	43857	43857					0.04759259419893169
VIKAAKLA	8	Unmodified	_VIKAAKLA_					0	0	0		tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	tr|A0A553SMY3|A0A553SMY3_NIACI2-oxoglutaratedehydrogenaseE1componentOS=NialliacirculansOX=1397GN=odhAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	407.2793762087822	2	407.281463	812.548374	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.75	1	103.75	103.25	104.25	0								0	0	0	1.0178	1	43634	43634		0	0	1				37817	16400	18708	18786	43858	43858					0.13460171007727695
VIKAANIAI	9	Unmodified	_VIKAANIAI_					0	0	0			REV__tr|A0A7D6VR13|A0A7D6VR13_9CLOTDUF2922domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03660PE=4SV=1	REV__tr|A0A7D6VR13|A0A7D6VR13_9CLOTDUF2922domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03660PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5898315310478	1	912.587679	911.580402	3.127	0.0028537	-0.12708	-0.00011597	2.9999	0.0027377	912.5873771144672	109.18	0.29121	109.33	109.2	109.49	0.1548					41	13	4	0	0	0	0.85403	1	47318	47318		0	0	1	201890000	+		37818	15399	18709	18787	43859	43859					0.12107538690861475
VIKGMIKI	8	Unmodified	_VIKGMIKI_					0	0	0		tr|A0A7D6ZWP0|A0A7D6ZWP0_9CLOTCrp/FnrfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08745PE=4SV=1	tr|A0A7D6ZWP0|A0A7D6ZWP0_9CLOTCrp/FnrfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08745PE=4SV=1	tr|A0A7D6ZWP0|A0A7D6ZWP0_9CLOTCrp/FnrfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_08745PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1992675662041	3	301.201625	900.583045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.773	1	40.773	40.273	41.273	0								0	0	0	1.0178	1	17080	17080		0	0	1				37819	17175	18710	18788	43860	43860					0.12877670824184406
VIKGTKKAV	9	Unmodified	_VIKGTKKAV_					0	0	0		tr|A0A7D6VWQ7|A0A7D6VWQ7_9CLOTVanWfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05110PE=4SV=1	tr|A0A7D6VWQ7|A0A7D6VWQ7_9CLOTVanWfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05110PE=4SV=1	tr|A0A7D6VWQ7|A0A7D6VWQ7_9CLOTVanWfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05110PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.2126953005791	3	315.21481	942.622602	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.801	1	31.599	31.099	32.099	1.7987								0	0	0	0.42693	1	12492	12492		1.1933	0	1				37820	16977	18711	18789	43861	43861					0.14899514099272437
VIKIILWK	8	Unmodified	_VIKIILWK_					0	0	0			REV__nc|ENSG00000115155|Q9HC10-2|OTOF	REV__nc|ENSG00000115155|Q9HC10-2|OTOF	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2334777712822	3	338.235434	1011.68447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.94	1	101.94	101.44	102.44	0								0	0	0	1.0178	1	42689	42689		0	0	1		+		37821	14413	18712	18790	43862	43862					0.17909865518402057
VIKIVKKAFK	10	Unmodified	_VIKIVKKAFK_					0	0	0			REV__tr|A0A7D6W1Q0|A0A7D6W1Q0_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	REV__tr|A0A7D6W1Q0|A0A7D6W1Q0_9CLOT4-hydroxy-tetrahydrodipicolinatesynthaseOS=ClostridiumintestinaleOX=36845GN=dapAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1173.808398425579	1	1173.80818	1172.8009	1.3526	0.0015877	-1.0983	-0.0012892	0.25433	0.00029853	1173.8067681625193	105.4	0.64072	105.4	105.27	105.91	0					63	32	2	0	0	0	0.89803	1	44726	44726		0	0	1	16115000	+		37822	15593	18713	18791	43863	43863					0.2214118401830092
VIKKLKKRAR	10	Unmodified	_VIKKLKKRAR_					0	0	0			REV__tr|A0A7D6VUI9|A0A7D6VUI9_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_20720PE=3SV=1	REV__tr|A0A7D6VUI9|A0A7D6VUI9_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_20720PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4387084841728	2	620.440424	1238.86629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.09	1	110.14	109.64	110.64	0.048843								0	0	0	0.66264	1	47509	47509		0	0	1		+		37823	15515	18714	18792	43864	43864					0.25641598263996457
VIKPVKPRAP	10	Unmodified	_VIKPVKPRAP_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1104.726855456829	1	1104.72518	1103.7179	1.3327	0.0014723	0.051374	5.6754E-05	1.3841	0.001529	1104.7248259953412	107.57	0.17635	107.57	107.47	107.65	0					21	8	3	0	0	0	0.89803	1	46129	46129		0.40072	0.40072	1	52588000			37824	4818	18715	18793	43865	43865					0.170188672903123
VIKPVKPRAP	10	Unmodified	_VIKPVKPRAP_					0	0	0		ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	ENSG00000187105|ENST00000553558|HEATR4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1104.728808581829	1	1104.72518	1103.7179	2.7869	0.0030787	-2.5482	-0.0028151	0.23866	0.00026365	1104.725443680295	106.01	0.13187	106.17	106.12	106.25	0.15859					12	6	3	0	0	0	0.89803	1	45297	45297		0.40072	0.40072	1	33755000			37825	4818	18715	18793	43866	43866					0.170188672903123
VIKTPVVK	8	Unmodified	_VIKTPVVK_					0	0	0		nc|ENSG00000133422|Q9Y6X9-2|MORC2;ENSG00000133422|ENST00000397641|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.3020202517509	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.919	1	91.919	91.419	92.419	0								0	0	0	1.0178	1	38411	38411		0.52476	0	1				37826	2572	18716	18794	43867	43867					0.14424726696267953
VIKTPVVK	8	Unmodified	_VIKTPVVK_					0	0	0		nc|ENSG00000133422|Q9Y6X9-2|MORC2;ENSG00000133422|ENST00000397641|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	MSMS	GG20161007_CRH_Patient100_A02_02	2	442.3040038943291	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.502	1	91.692	91.192	92.192	0.19042								0	0	0	1.0178	1	38326	38326		0.52476	0	1				37827	2572	18716	18794	43868	43868					0.14424726696267953
VIKTPVVK	8	Unmodified	_VIKTPVVK_					0	0	0		nc|ENSG00000133422|Q9Y6X9-2|MORC2;ENSG00000133422|ENST00000397641|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	nc|ENSG00000133422|Q9Y6X9-2|MORC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	442.3033630251884	2	442.302396	882.590239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.383	1	91.749	91.249	92.249	1.366								0	0	0	1.0178	1	38070	38070		0.52476	0	1				37828	2572	18716	18794	43869	43869					0.14424726696267953
VIKYTNALPA	10	Unmodified	_VIKYTNALPA_					0	0	0			REV__ENSG00000145555|ENST00000513610|MYO10	REV__ENSG00000145555|ENST00000513610|MYO10	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3166992068291	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.144	1	74.468	73.968	74.968	0.32494								0	0	0	0.66166	1	31014	31014		1.6526	0.17072	1		+		37829	10274	18717	18795	43870	43870					0.08222889028479585
VILANRENHK	10	Unmodified	_VILANRENHK_					0	0	0		ENSG00000115827|ENST00000375255|DCAF17;nc|ENSG00000115827|Q5H9S7-2|DCAF17	ENSG00000115827|ENST00000375255|DCAF17	ENSG00000115827|ENST00000375255|DCAF17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.5645324587822	3	398.563161	1192.66765	-0.76628	-0.00030541	3.1067	0.0012382	2.3404	0.0009328	398.5646541003952	19.681	0.34659	19.681	19.477	19.823	0					21	10	3	0	0	0	0.8251	1	8205	8205		9.544	4.2471	1	2491600			37830	1938	18718	18796	43871	43871					0.07902712894497199
VILEGLLSA	9	Unmodified	_VILEGLLSA_					0	0	0		tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1;tr|A0A553SLE1|A0A553SLE1_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20490PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	914.5553466677666	1	914.55571	913.548434	1.5892	0.0014534	-2.8211	-0.0025801	-1.2319	-0.0011266	914.5529704241136	67.185	0.5794	67.185	66.99	67.569	0					30	18	2	0	0	0	0.34572	1	28043	28043		23.148	1.4018	1	2353300			37831	16382	18719	18797	43872	43872					0.08820126217096913
VILEGLLSA	9	Unmodified	_VILEGLLSA_					0	0	0		tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1;tr|A0A553SLE1|A0A553SLE1_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20490PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	914.5581542849541	1	914.55571	913.548434	1.8941	0.0017323	-1.1748	-0.0010744	0.71934	0.00065787	914.5546283202723	66.942	0.58864	67.266	67.032	67.62	0.32449					26	19	2	0	0	0	0.1735	1	28027	28027		36.044	1.9418	1	1560500			37832	16382	18719	18797	43873	43873					0.08820126217096913
VILEKILTI	9	Unmodified	_VILEKILTI_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-6|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.3511840701103	2	521.349543	1040.68453	2.0811	0.001085	0.52878	0.00027568	2.6099	0.0013607	521.3497388637599	69.118	0.32979	70.484	70.284	70.614	1.3657					23	10	3	0	0	0	0.043696	1	29010	29010		72.968	4.8872	1	3014900			37833	1776	18720	18798	43874	43874					0.16581820727742524
VILEKILTI	9	Unmodified	_VILEKILTI_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-6|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.3511840701103	2	521.349543	1040.68453	1.7461	0.00091031	0.79712	0.00041558	2.5432	0.0013259	521.3498741650182	68.509	0.34234	70.362	70.185	70.527	1.853					22	10	3	0	0	0	0.050451	1	28746	28746		67.838	9.1593	1	2660700			37834	1776	18720	18798	43875	43875					0.16581820727742524
VILEKILTI	9	Unmodified	_VILEKILTI_					0	0	0		nc|ENSG00000112282|Q9ULK4-4|MED23;nc|ENSG00000112282|Q9ULK4-5|MED23;nc|ENSG00000112282|Q9ULK4-3|MED23;ENSG00000112282|ENST00000368068|MED23;nc|ENSG00000112282|Q9ULK4-2|MED23;nc|ENSG00000112282|Q9ULK4-6|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	nc|ENSG00000112282|Q9ULK4-4|MED23	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	521.349543	1040.68453	1.4209	0.00074077	-0.58887	-0.00030701	0.832	0.00043376	521.349533256605	70.251	0.26321	70.573	70.474	70.737	0.32224	-0.0044529	-0.00080983	NaN	72.968	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1164100			37835	1776	18720	18798							0.16581820727742524
VILFKPMV	8	Unmodified	_VILFKPMV_					0	0	0		ENSG00000145725|ENST00000358359|PPIP5K2;nc|ENSG00000145725|O43314-2|PPIP5K2;ENST00000511724.1_1_5:102509577-102524329:+|nuORF	ENSG00000145725|ENST00000358359|PPIP5K2	ENSG00000145725|ENST00000358359|PPIP5K2	MSMS	GG20161007_CRH_Patient100_A02_01	1	473.7920715212822	2	473.793349	945.572146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.292	1	42.292	41.792	42.792	0								0	0	0	1.0178	1	17700	17700		0.79363	0	1				37836	3121	18721	18799	43876	43876					0.09718268449921652
VILGKYLIC	9	Unmodified	_VILGKYLIC_					0	0	0			REV__ENST00000464362.5_1_22:26862186-26867208:-|nuORF	REV__ENST00000464362.5_1_22:26862186-26867208:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.3100463747978	2	511.309364	1020.60417	3.6024	0.0018419	-2.8188	-0.0014413	0.78359	0.00040066	511.3082930263328	102.43	0.23353	102.61	102.44	102.68	0.18066					13	11	2	0	0	0	0.83213	1	43062	43062		2.0598	0	1	11139000	+		37837	8966	18722	18800	43877	43877					0.09469636133042059
VILKKKKKL	9	Unmodified	_VILKKKKKL_					0	0	0		NOS1AP|p.S460Vfs*43|1|0.07|ENSG00000198929|chr1:162367321-162367322|-/A|frameshift_variant;NOS1AP|p.S460Wfs*44|1|0.07|ENSG00000198929|chr1:162367323-162367324|-/TGGT|frameshift_variant;ENSG00000198929|ENST00000361897|NOS1AP	NOS1AP|p.S460Vfs*43|1|0.07|ENSG00000198929|chr1:162367321-162367322|-/A|frameshift_variant	NOS1AP|p.S460Vfs*43|1|0.07|ENSG00000198929|chr1:162367321-162367322|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	549.4108154177666	2	549.410269	1096.80599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.43	1	103.61	103.11	104.11	0.18066								0	0	0	0.42693	1	43552	43552		0	0	1				37838	5103	18723	18801	43878	43878					0.2614548788094453
VILKRKLR	8	Unmodified	_VILKRKLR_					0	0	0			REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	REV__nc|ENSG00000149474|Q9H8E8-2|KAT14	MSMS	GG20161007_CRH_Patient100_A02_02	2	513.3669921755791	2	513.368936	1024.72332	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.344	1	71.668	71.168	72.168	0.32359								0	0	0	1.0178	1	29859	29859		0.79363	0	1		+		37839	10371	18724	18802	43879	43879					0.21194590872778463
VILLTSFLS	9	Unmodified	_VILLTSFLS_					0	0	0		tr|A0A7D6ZJ57|A0A7D6ZJ57_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07295PE=4SV=1	tr|A0A7D6ZJ57|A0A7D6ZJ57_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07295PE=4SV=1	tr|A0A7D6ZJ57|A0A7D6ZJ57_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07295PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.5396301150322	3	331.539071	991.595384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.462	1	98.462	97.962	98.962	0								0	0	0	0.42089	1	41174	41174		4.1895	0	1				37840	17107	18725	18803	43880	43880					0.09924985768248007
VILPTVHEV	9	Unmodified	_VILPTVHEV_					0	0	0		ENST00000487662.1_1_3:57643405-57651906:-|nuORF;ENSG00000174839|ENST00000311128|DENND6A	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	503.8010742068291	2	503.800217	1005.58588	1.8717	0.00094294	1.058	0.00053304	2.9297	0.001476	503.80031979244563	43.572	0.50869	43.572	43.302	43.811	0					29	15	2	0	0	0	0.1109	2	18269	18222;18269		50.855	18.738	1	2653500			37841	4344	18726	18804	43881;43882	43882					0.08331217482714237
VILPTVHEV	9	Unmodified	_VILPTVHEV_					0	0	0		ENST00000487662.1_1_3:57643405-57651906:-|nuORF;ENSG00000174839|ENST00000311128|DENND6A	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.8014709353447	2	503.800217	1005.58588	2.4271	0.0012228	0.24677	0.00012432	2.6738	0.0013471	503.8002448211729	41.44	0.6053	42.765	42.399	43.004	1.3254					44	18	3	0	0	0	0.099302	4	17341	17293;17341;17389;17431		64.236	64.236	1	7634000			37842	4344	18726	18804	43883;43884;43885;43886	43884					0.08331217482714237
VILPTVHEV	9	Unmodified	_VILPTVHEV_					0	0	0		ENST00000487662.1_1_3:57643405-57651906:-|nuORF;ENSG00000174839|ENST00000311128|DENND6A	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.8017150759697	2	503.800217	1005.58588	1.8562	0.00093516	0.62532	0.00031504	2.4815	0.0012502	503.8005499835577	40.958	0.50904	42.851	42.579	43.088	1.8927					38	15	3	0	0	0	0.075994	3	17195	17153;17195;17251		74.423	64.236	1	7770400			37843	4344	18726	18804	43887;43888;43889	43888					0.08331217482714237
VILPTVHEVDI	11	Unmodified	_VILPTVHEVDI_					0	0	0		ENST00000487662.1_1_3:57643405-57651906:-|nuORF;ENSG00000174839|ENST00000311128|DENND6A	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	ENST00000487662.1_1_3:57643405-57651906:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8585693240166	2	617.855721	1233.69689	2.3505	0.0014523	0.33826	0.000209	2.6888	0.0016613	617.8558836067618	73.141	0.31732	74.951	74.797	75.114	1.8101					22	9	3	0	0	0	0.83203	1	30661	30661		13.906	3.0821	1	2216000			37844	4344	18727	18805	43890	43890					0.08938812400151619
VILQAKKKKM	10	Unmodified	_VILQAKKKKM_					0	0	0		ENST00000593225.1_1_18:59829680-59830782:-|nuORF	ENST00000593225.1_1_18:59829680-59830782:-|nuORF	ENST00000593225.1_1_18:59829680-59830782:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2605773806572	3	396.261655	1185.76313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.833	1	91.833	91.333	92.333	0								0	0	0	0.66222	1	38376	38376		0.69767	0.42865	1				37845	7501	18728	18806	43891	43891					0.17768349761195168
VILQAKKKKM	10	Unmodified	_VILQAKKKKM_					0	0	0		ENST00000593225.1_1_18:59829680-59830782:-|nuORF	ENST00000593225.1_1_18:59829680-59830782:-|nuORF	ENST00000593225.1_1_18:59829680-59830782:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2620422244072	3	396.261655	1185.76313	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.155	1	95.278	94.778	95.778	0.12331								0	0	0	0.66222	1	39819	39819		0.69767	0.46182	1				37846	7501	18728	18806	43892	43892					0.17768349761195168
VILTLGRFP	9	Unmodified	_VILTLGRFP_					0	0	0			REV__ENST00000392688.6_1_1:152285965-152286112:+|nuORF	REV__ENST00000392688.6_1_1:152285965-152286112:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.3211242556572	2	508.318577	1014.6226	2.3579	0.0011986	2.4952	0.0012683	4.8531	0.0024669	508.31997109579413	62.609	0.21524	62.609	62.492	62.707	0					11	6	2	0	0	0	0.51189	1	26121	26121		14.838	0	1	377410	+		37847	12801	18729	18807	43893	43893					0.11587514099278451
VIMHSAIF	8	Unmodified	_VIMHSAIF_					0	0	0			REV__ENSG00000088451|ENST00000261296|TGDS	REV__ENSG00000088451|ENST00000261296|TGDS	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	459.1730834841728	2	459.249306	916.484059	2.4042	0.0011041	-0.90969	-0.00041778	1.4945	0.00068635	459.2485127546091	71.888	0.15842	72.213	72.133	72.291	0.32494					8	4	3	0	0	0	2.3239	1	30071	30071		0.79363	0	1	478630	+		37848	8874	18730	18808	43894	43894					0.022476478592921012
VIMKLRHV	8	Unmodified	_VIMKLRHV_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.5441772341728	3	332.544273	994.610991	0.99881	0.00033215	-1.4423	-0.00047964	-0.44351	-0.00014749	332.5436076408784	46.284	0.43906	48.255	48.064	48.503	1.9703					24	13	2	0	0	0	0.89152	1	19387	19387		1.6526	0	1	1337900	+		37849	9737	18731	18809	43895	43895					0.11346993804284011
VIMKLRHV	8	Unmodified	_VIMKLRHV_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	332.544273	994.610991	1.17	0.00038908	-0.93351	-0.00031043	0.23649	7.8644E-05	332.54404122592774	47.948	0.26696	48.278	48.132	48.399	0.33034	0.040705	0.00066136	NaN	1.6526	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	514300	+		37850	9737	18731	18809							0.11346993804284011
VIMKLRHV	8	Unmodified	_VIMKLRHV_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	332.544273	994.610991	0.73069	0.00024299	-2.1274	-0.00070745	-1.3967	-0.00046446	332.54370305531717	46.797	0.47789	48.179	47.964	48.442	1.3825	-0.058052	-0.00052969	NaN	1.6526	33	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1466200	+		37851	9737	18731	18809							0.11346993804284011
VIMKLRHV	8	Unmodified	_VIMKLRHV_					0	0	0			REV__ENSG00000128731|ENST00000261609|HERC2	REV__ENSG00000128731|ENST00000261609|HERC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	332.544273	994.610991	0.99881	0.00033215	-1.4423	-0.00047964	-0.44351	-0.00014749	332.5436076408784	46.284	0.43906	48.255	48.064	48.503	1.9703	0.017347	0.00015375	NaN	1.6526	24	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1337900	+		37852	9737	18731	18809							0.11346993804284011
VIMMKLRH	8	Unmodified	_VIMMKLRH_					0	0	0		ENST00000489691.1_1_X:54558969-54570464:+|nuORF	ENST00000489691.1_1_X:54558969-54570464:+|nuORF	ENST00000489691.1_1_X:54558969-54570464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2994872927666	2	514.298807	1026.58306	2.0006	0.0010289	0.21375	0.00010993	2.2143	0.0011388	514.2988388555358	79.982	0.347	80.283	80.1	80.447	0.30047					17	10	2	0	0	0	0.89198	1	33457	33457		0	0	1	972310			37853	6897	18732	18810	43896	43896					0.0708334755256601
VIMVLPKL	8	Unmodified	_VIMVLPKL_					0	0	0		tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	456.3009826540947	2	456.801174	911.587796	3.3547	0.0015324	-0.66201	-0.00030241	2.6927	0.00123	456.8009539472264	107.73	0.25494	107.78	107.64	107.89	0.052444					49	13	5	0	0	0	2.3239	1	46178	46178		0	0	1	580090000			37854	16125	18733	18811	43897	43897					0.12846554966949952
VIMVLPKL	8	Unmodified	_VIMVLPKL_					0	0	0		tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	tr|A0A553SGW7|A0A553SGW7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_11715PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	456.3002197146416	2	456.801174	911.587796	3.4771	0.0015883	-1.1144	-0.00050905	2.3627	0.0010793	456.8007027301895	106.1	0.19527	106.26	106.17	106.36	0.16174					36	10	5	0	0	0	2.3239	1	45270	45270		0	0	1	317770000			37855	16125	18733	18811	43898	43898					0.12846554966949952
VINAFIQATL	10	Unmodified	_VINAFIQATL_					0	0	0			REV__ENST00000510488.1_1_3:141190162-141190471:-|nuORF	REV__ENST00000510488.1_1_3:141190162-141190471:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3178588747978	2	545.318774	1088.623	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.173	1	73.498	72.998	73.998	0.32494								0	0	0	0.66176	1	30609	30609		1.4819	0.41044	1		+		37856	13568	18734	18812	43899	43899					0.08222889028479585
VINDGIKFLY	10	Unmodified	_VINDGIKFLY_					0	0	0			REV__tr|A0A7D7A5D7|A0A7D7A5D7_9CLOTTranscriptionfactorYdeBOS=ClostridiumintestinaleOX=36845GN=HZF06_05480PE=4SV=1	REV__tr|A0A7D7A5D7|A0A7D7A5D7_9CLOTTranscriptionfactorYdeBOS=ClostridiumintestinaleOX=36845GN=HZF06_05480PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.2074462771416	3	394.557013	1180.64921	1.359	0.00053619	1.7573	0.00069335	3.1163	0.0012295	394.5575504031905	67.703	0.81958	69.081	68.575	69.394	1.3778					35	26	2	0	0	0	0.12545	1	28424	28424		4.1895	1.1943	1	475090	+		37857	15882	18735	18813	43900	43900					0.0661115819996212
VINTLMQPT	9	Unmodified	_VINTLMQPT_					0	0	0			REV__OR5M11|p.S82L|1|0.17|ENSG00000255223|chr11:56543013-56543013|G/A|missense_variant	REV__OR5M11|p.S82L|1|0.17|ENSG00000255223|chr11:56543013-56543013|G/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	508.3162414431572	2	508.775885	1015.53722	2.8888	0.0014697	-1.2804	-0.00065142	1.6084	0.00081831	508.77572813404083	75.445	0.40437	76.752	76.646	77.051	1.3063					21	12	2	0	0	0	0.10591	1	31640	31640		19.257	9.1831	1	1281100	+		37858	14591	18736	18814	43901	43901					0.03006980851307617
VINTLMQPT	9	Unmodified	_VINTLMQPT_					0	0	0			REV__OR5M11|p.S82L|1|0.17|ENSG00000255223|chr11:56543013-56543013|G/A|missense_variant	REV__OR5M11|p.S82L|1|0.17|ENSG00000255223|chr11:56543013-56543013|G/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.775885	1015.53722	2.9391	0.0014953	-1.7381	-0.00088431	1.2009	0.00061101	508.7758345731222	75.098	0.33932	76.88	76.638	76.978	1.7817	0.0053734	0.0010766	NaN	19.257	20	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	867940	+		37859	14591	18736	18814							0.03006980851307617
VINVNNVVRRI	11	Unmodified	_VINVNNVVRRI_					0	0	0			REV__VPS13B-CPQ|2|fusion	REV__VPS13B-CPQ|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.3968994021416	2	648.398953	1294.78335	3.6909	0.0023932	-3.5367	-0.0022932	0.1542	9.9982E-05	648.3969750567032	95.422	0.22304	95.843	95.72	95.943	0.4212					16	8	2	0	0	0	1.0366	1	40154	40154		1.1933	0	1	3980800	+		37860	9849	18737	18815	43902	43902					0.14775236745367692
VINYLWVFVI	10	Unmodified	_VINYLWVFVI_					0	0	0			REV__ENSG00000175893|ENST00000380916|ZDHHC21	REV__ENSG00000175893|ENST00000380916|ZDHHC21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3704711794853	2	633.368267	1264.72198	2.3357	0.0014794	0.61045	0.00038664	2.9462	0.001866	633.3684677825022	81.718	2.5956	81.718	80.572	83.168	0					228	84	5	0	0	0	0.89803	1	34328	34328		0.40072	0	1	11549000	+		37861	11164	18738	18816	43903	43903					0.10020911993365189
VIPFKHLNNG	10	Unmodified	_VIPFKHLNNG_					0	0	0			REV__ENSG00000162595|ENST00000646789|DIRAS3	REV__ENSG00000162595|ENST00000646789|DIRAS3	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2171203494072	3	380.217102	1137.62948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.704	1	27.976	27.476	28.476	0.27119								0	0	0	0.66161	1	11585	11585		1.7423	0	1		+		37862	10649	18739	18817	43904	43904					0.06616826979825419
VIPFSEAQMC	10	Unmodified	_VIPFSEAQMC_					0	0	0		nc|ENSG00000166938|Q8TF46-3|DIS3L;ENST00000564909.5_1_15:66585934-66618751:+|nuORF;nc|ENSG00000166938|Q8TF46-2|DIS3L;nc|ENSG00000166938|Q8TF46-4|DIS3L;ENSG00000166938|ENST00000319212|DIS3L	nc|ENSG00000166938|Q8TF46-3|DIS3L	nc|ENSG00000166938|Q8TF46-3|DIS3L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.7604247927666	2	562.759378	1123.5042	3.8234	0.0021516	-2.9929	-0.0016843	0.83046	0.00046735	562.7578521387895	97.028	0.14828	97.312	97.242	97.39	0.28442					12	5	3	0	0	0	0.65659	1	40822	40822		20.415	2.2682	1	3607300			37863	3937	18740	18818	43905	43905					-0.05260969263053994
VIPILEILLRR	11	Unmodified	_VIPILEILLRR_					0	0	0		ENSG00000111364|ENST00000238146|DDX55;ENST00000545042.1_1_12:124090574-124092188:+|nuORF;ENST00000539934.5_1_12:124090492-124093337:+|nuORF;ENST00000544429.5_1_12:124090532-124092210:+|nuORF;ENST00000542286.5_1_12:124086695-124092071:+|nuORF;DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	ENSG00000111364|ENST00000238146|DDX55	ENSG00000111364|ENST00000238146|DDX55	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4774658083916	4	334.477512	1333.88094	0.12602	4.215E-05	1.5388	0.0005147	1.6648	0.00055685	334.4780520676026	26.002	0.8155	27.718	27.492	28.307	1.7167					50	26	2	0	0	0	1.0402	1	11007	11007		0.094841	0	1	4249200			37864	1737	18741	18819	43906	43906					0.22735625621476174
VIPLAPKDV	9	Unmodified	_VIPLAPKDV_					0	0	0		ORC1|p.R661Sfs*24|1|0.06|ENSG00000085840|chr1:52383452-52383453|-/A|frameshift_variant;ENSG00000085840|ENST00000371568|ORC1	ORC1|p.R661Sfs*24|1|0.06|ENSG00000085840|chr1:52383452-52383453|-/A|frameshift_variant	ORC1|p.R661Sfs*24|1|0.06|ENSG00000085840|chr1:52383452-52383453|-/A|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.2028991580009	2	476.29731	950.580068	3.5295	0.0016811	1.8974	0.00090372	5.4269	0.0025848	476.2977947882795	99.629	0.12183	99.701	99.655	99.777	0.072716					5	3	2	0	0	0	0.11916	1	41744	41744		1.8442	0	1	1788100			37865	1066	18742	18820	43907	43907					0.10280118971036245
VIPLRIGAL	9	Unmodified	_VIPLRIGAL_					0	0	0			REV__nc|ENSG00000126903|P09131-2|SLC10A3	REV__nc|ENSG00000126903|P09131-2|SLC10A3	MSMS	GG20161007_CRH_Patient100_A02_01	1	476.3227111697197	2	476.32112	950.627687	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.56	1	104.56	104.06	105.06	0								0	0	0	0.42693	1	44158	44158		0.6015	0	1		+		37866	9707	18743	18821	43908	43908					0.1503981796190601
VIPTLVKLL	9	Unmodified	_VIPTLVKLL_					0	0	0		ENST00000505378.5_1_4:99182716-99313239:+|nuORF;ENST00000507303.5_1_4:99182716-99313239:+|nuORF;nc|ENSG00000138698|P52306-2|RAP1GDS1;nc|ENSG00000138698|P52306-3|RAP1GDS1;nc|ENSG00000138698|P52306-4|RAP1GDS1;ENSG00000138698|ENST00000408927|RAP1GDS1;nc|ENSG00000138698|P52306-5|RAP1GDS1	ENST00000505378.5_1_4:99182716-99313239:+|nuORF	ENST00000505378.5_1_4:99182716-99313239:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.3482543826103	2	498.346803	994.679054	1.6839	0.00083916	0.50155	0.00024995	2.1854	0.0010891	498.34706162794566	78.091	0.43475	79.843	79.622	80.057	1.7514					28	13	3	0	0	0	0.10993	1	32752	32752		46.021	5.5724	1	1407000			37867	2848	18744	18822	43909	43909					0.18150141935961983
VIPYRFILLHR	11	Unmodified	_VIPYRFILLHR_					0	0	0			REV__ENST00000310164.2_1_X:117958660-117959212:+|nuORF	REV__ENST00000310164.2_1_X:117958660-117959212:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1998779177666	3	476.294235	1425.86087	2.3484	0.0011185	0.86479	0.0004119	3.2132	0.0015304	476.2943270780229	54.474	0.66843	54.474	54.314	54.982	0					28	21	2	0	0	0	0.14606	1	22762	22762		0	0	1	1129900	+		37868	12357	18745	18823	43910	43910					0.16497874681545
VIQCIKQLPQY	11	Unmodified	_VIQCIKQLPQY_					0	0	0			REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|137|3|sense	REV__L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|137|3|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1199828982353	3	444.916324	1331.72714	0.17054	7.5877E-05	4.1174	0.0018319	4.288	0.0019078	444.91969589530163	50.859	0.27575	52.834	52.636	52.912	1.9753					11	8	2	0	0	0	0.14606	1	21239	21239		3.0723	2.9129	1	356650	+		37869	14318	18746	18824	43911	43911					0.0745484779367871
VIQELINTV	9	Unmodified	_VIQELINTV_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.7270995974541	2	514.802957	1027.59136	0.93285	0.00048024	3.9326	0.0020245	4.8655	0.0025048	514.8051903005827	56.423	0.18657	57.838	57.69	57.877	1.4145					7	5	2	0	0	0	0.10339	1	23602	23602		14.838	9.1064	1	1048500			37870	5033	18747	18825	43912	43912					0.0786689627452688
VIQLDRRLERK	11	Unmodified	_VIQLDRRLERK_					0	0	0			REV__tr|A0A553STV3|A0A553STV3_NIACINickelimportsystemATP-bindingproteinNikEOS=NialliacirculansOX=1397GN=CEQ21_05820PE=3SV=1	REV__tr|A0A553STV3|A0A553STV3_NIACINickelimportsystemATP-bindingproteinNikEOS=NialliacirculansOX=1397GN=CEQ21_05820PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	713.4388305544853	2	713.436067	1424.85758	2.1241	0.0015154	0.3588	0.00025598	2.4829	0.0017714	713.4363280518709	53.212	1.1124	53.212	52.854	53.966	0					111	37	4	0	0	0	0.91768	2	22142	22142;22222		8.7454	3.0136	1	39689000	+		37871	15264	18748	18826	43913;43914	43913					0.16214579836855592
VIQLIEGKSF	10	Unmodified	_VIQLIEGKSF_					0	0	0			REV__ENSG00000105926|ENST00000222644|PALS2	REV__ENSG00000105926|ENST00000222644|PALS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3335449099541	2	567.331882	1132.64921	2.7597	0.0015657	-2.5705	-0.0014583	0.18924	0.00010736	567.3306304083815	75.234	0.76951	77.015	76.608	77.377	1.7817					68	24	4	0	0	0	0.88314	1	31517	31517		3.2813	0	1	1861500	+		37872	9197	18749	18827	43915	43915					0.0881915819995811
VIRDRAIALQP	11	Unmodified	_VIRDRAIALQP_					0	0	0		AluSq2_dup18060|chr5:139544290-139544589:-|1.3614962498174907|0.0990166627229545|3.78|410.0|6|2|sense	AluSq2_dup18060|chr5:139544290-139544589:-|1.3614962498174907|0.0990166627229545|3.78|410.0|6|2|sense	AluSq2_dup18060|chr5:139544290-139544589:-|1.3614962498174907|0.0990166627229545|3.78|410.0|6|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	313.6928283572197	4	313.693753	1250.7459	-2.6816	-0.00084121	-0.61662	-0.00019343	-3.2983	-0.0010346	313.6935487403373	31.121	0.66912	31.121	30.896	31.565	0					98	21	5	0	0	0	1.0191	1	13079	13079		2.6312	0.70373	1	20258000			37873	50	18750	18828	43916	43916					0.1305614547973164
VIRELLPNGLR	11	Unmodified	_VIRELLPNGLR_					0	0	0		ENSG00000198700|ENST00000361565|IPO9;ENST00000479374.1_1_1:201816429-201819601:+|nuORF	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	320.7018615603447	4	320.701578	1278.7772	-2.1291	-0.0006828	-0.10216	-3.2762E-05	-2.2312	-0.00071556	320.7023020289313	42.799	1.6488	42.799	42.353	44.002	0					207	52	6	0	0	0	0.99329	2	17902	17902;18071		3.5927	2.5791	1	265120000			37874	5069	18751	18829	43917;43918	43917					0.14896718513841734
VIRELLPNGLR	11	Unmodified	_VIRELLPNGLR_					0	0	0		ENSG00000198700|ENST00000361565|IPO9;ENST00000479374.1_1_1:201816429-201819601:+|nuORF	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	320.6998779177666	4	320.701578	1278.7772	1.1113	0.00035641	-2.8335	-0.00090872	-1.7222	-0.00055231	320.7013457434464	42.177	1.6285	42.498	41.979	43.608	0.32058					201	53	5	0	0	0	1.0214	1	17989	17989		2.2527	1.2392	1	296590000			37875	5069	18751	18829	43919	43919					0.14896718513841734
VIRELLPNGLR	11	Unmodified	_VIRELLPNGLR_					0	0	0		ENSG00000198700|ENST00000361565|IPO9;ENST00000479374.1_1_1:201816429-201819601:+|nuORF	ENSG00000198700|ENST00000361565|IPO9	ENSG00000198700|ENST00000361565|IPO9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	320.7015869021416	4	320.701578	1278.7772	1.1368	0.00036459	-3.5596	-0.0011416	-2.4227	-0.00077697	320.7013242248906	39.86	1.3301	41.722	41.092	42.422	1.8624					180	42	6	0	0	0	1.0214	2	16662	16662;16741		2.2527	1.2392	1	348870000			37876	5069	18751	18829	43920;43921	43920					0.14896718513841734
VIRIALGKHV	10	Unmodified	_VIRIALGKHV_					0	0	0			REV__tr|A0A553SHS1|A0A553SHS1_NIACIMarRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13495PE=4SV=1	REV__tr|A0A553SHS1|A0A553SHS1_NIACIMarRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_13495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3633300662041	2	553.36385	1104.71315	3.1506	0.0017434	-3.3069	-0.0018299	-0.15626	-8.647E-05	553.3612225261916	108.76	0.17838	108.92	108.83	109.01	0.1548					20	8	3	0	0	0	0.89803	1	47039	47039		0.40072	0	1	14438000	+		37877	14811	18752	18830	43922	43922					0.16497983147542072
VIRLNKHLL	9	Unmodified	_VIRLNKHLL_					0	0	0		ENSG00000125863|ENST00000347364|MKKS	ENSG00000125863|ENST00000347364|MKKS	ENSG00000125863|ENST00000347364|MKKS	MSMS	GG20161007_CRH_Patient100_W632_01	3	369.2468444705009	3	369.244992	1104.71315	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.28	109.78	110.78	0.16133								0	0	0	0.42693	1	47841	47841		1.1933	0	1				37878	2286	18753	18831	43923	43923					0.1649798314756481
VIRLRKTYY	9	Unmodified	_VIRLRKTYY_					0	0	0			REV__tr|A0A553SR36|A0A553SR36_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00190PE=4SV=1	REV__tr|A0A553SR36|A0A553SR36_NIACIGntRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_00190PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2113525271416	2	606.36659	1210.71863	2.199	0.0013334	2.6305	0.001595	4.8295	0.0029284	606.3665319697316	73.641	0.50184	73.966	73.636	74.138	0.32494					22	15	2	0	0	0	0.11898	1	30798	30798		0	0	1	757880	+		37879	15144	18754	18832	43924	43924					0.12169661939378784
VIRRLYDMK	9	Unmodified	_VIRRLYDMK_					0	0	0		tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	398.7694579958916	3	398.565626	1192.67505	-0.78988	-0.00031482	-1.6529	-0.00065877	-2.4427	-0.00097359	398.56483034121175	19.145	0.19164	19.145	19.013	19.205	0					8	5	2	0	0	0	0.11819	1	7939	7939		5.2969	0	1	390730			37880	16096	18755	18833	43925	43925					0.0864172917056294
VIRRLYDMK	9	Unmodified	_VIRRLYDMK_					0	0	0		tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	398.565626	1192.67505	0.6171	0.00024596	-2.9646	-0.0011816	-2.3475	-0.00093562	398.56423510513866	19.167	0.15602	19.36	19.263	19.419	0.19342	0.078885	-0.00065575	NaN	5.2969	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618390			37881	16096	18755	18833							0.0864172917056294
VIRRLYDMK	9	Unmodified	_VIRRLYDMK_					0	0	0		tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	tr|A0A553SG58|A0A553SG58_NIACIRegulatoryproteinRecXOS=NialliacirculansOX=1397GN=recXPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	398.565626	1192.67505	0.17797	7.0934E-05	-2.1438	-0.00085446	-1.9659	-0.00078352	398.56465199031356	17.89	0.13926	19.338	19.292	19.431	1.448	0.057009	0.00032559	NaN	5.2969	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	243070			37882	16096	18755	18833							0.0864172917056294
VIRSKKKRRHP	11	Unmodified	_VIRSKKKRRHP_					0	0	0		ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.9788696169853	4	351.981019	1403.89497	-1.3556	-0.00047714	-1.9396	-0.0006827	-3.2952	-0.0011598	351.9802264837377	36.565	0.81154	36.565	36.27	37.081	0					133	55	3	0	0	0	1.0391	2	15223	15223;15467		0.40827	0.26837	1	35389000			37883	6905	18756	18834	43926;43927	43926					0.20917715893165223
VIRSKKKRRHP	11	Unmodified	_VIRSKKKRRHP_					0	0	0		ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	ENST00000490671.1_1_15:99788499-99789692:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.9797546267509	4	351.981019	1403.89497	-0.79932	-0.00028135	-2.8486	-0.0010026	-3.6479	-0.001284	351.9799702341425	33.881	0.1665	35.156	35.092	35.259	1.2746					30	18	2	0	0	0	1.0391	1	14225	14225		0.40827	0.24894	1	209090000			37884	6905	18756	18834	43928	43928					0.20917715893165223
VIRTEPIIV	9	Unmodified	_VIRTEPIIV_					0	0	0		ENST00000503561.7_1_5:50057675-50130728:+|nuORF;nc|ENSG00000151883|Q8N3A8-2|PARP8;ENSG00000151883|ENST00000281631|PARP8	ENST00000503561.7_1_5:50057675-50130728:+|nuORF	ENST00000503561.7_1_5:50057675-50130728:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3259155154228	2	520.329142	1038.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.232	1	46.176	45.676	46.676	1.9438								0	0	0	0.23225	1	18543	18543		19.257	0	1				37885	3305	18757	18835	43929	43929					0.12595479408128085
VISDEDEAL	9	Unmodified	_VISDEDEAL_					0	0	0		tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.7354308962822	2	495.734937	989.455321	2.6208	0.0012992	-1.8756	-0.00092981	0.74522	0.00036943	495.7339283505014	78.393	0.39809	79.66	79.449	79.848	1.2668					39	12	4	0	0	0	0.44535	1	32924	32924		18.135	2.3668	1	4708400			37886	16949	18758	18836	43930	43930					-0.039828430268016746
VISDEDEAL	9	Unmodified	_VISDEDEAL_					0	0	0		tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	tr|A0A7D6VUH5|A0A7D6VUH5_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_07390PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.7356140017509	2	495.734937	989.455321	1.5613	0.00077399	-0.88249	-0.00043748	0.6788	0.00033651	495.7344750075279	77.854	0.43312	79.605	79.407	79.84	1.7514					39	13	4	0	0	0	0.44535	1	32683	32683		18.135	1.1927	1	5380800			37887	16949	18758	18836	43931	43931					-0.039828430268016746
VISDHPVLL	9	Unmodified	_VISDHPVLL_					0	0	0		tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	tr|A0A7D6VP67|A0A7D6VP67_9CLOTDNA-directedRNApolymerasesubunitbeta'OS=ClostridiumintestinaleOX=36845GN=rpoCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	496.7935363650322	2	496.792392	991.570232	1.2952	0.00064344	1.2409	0.00061647	2.5361	0.0012599	496.79322665095947	38.964	0.45123	40.801	40.493	40.944	1.8366					21	13	2	0	0	0	0.3154	1	16294	16294		24.674	1.5255	1	2022400			37888	16756	18759	18837	43932	43932					0.07410930965670559
VISGPYCVEI	10	Unmodified	_VISGPYCVEI_					0	0	0		L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2798950076103	2	540.275718	1078.53688	1.7998	0.00097241	3.4268	0.0018514	5.2266	0.0028238	540.2777677870254	45.975	0.43906	47.35	47.116	47.555	1.3751					33	13	3	0	0	0	0.5476	2	19230	19230;19275		25.399	4.9457	1	2150200			37889	7696	18760	18838	43933;43934	43933					0.0007556113146165444
VISGPYCVEI	10	Unmodified	_VISGPYCVEI_					0	0	0		L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|67|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2784301638603	2	540.275718	1078.53688	1.6338	0.0008827	2.8149	0.0015208	4.4487	0.0024035	540.2777401838966	45.448	0.41238	47.408	47.176	47.589	1.9596					36	12	4	0	0	0	0.5476	1	19024	19024		25.399	4.9457	1	1595200			37890	7696	18760	18838	43935	43935					0.0007556113146165444
VISLKKLIVRE	11	Unmodified	_VISLKKLIVRE_					0	0	0		nc|ENSG00000170776|Q12802-4|AKAP13;ENSG00000170776|ENST00000394518|AKAP13;nc|ENSG00000170776|Q12802-2|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	nc|ENSG00000170776|Q12802-4|AKAP13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	649.4332763552666	2	649.43193	1296.84931	2.8417	0.0018455	-1.3678	-0.00088828	1.4739	0.00095721	649.4309467717628	107.34	0.20778	107.5	107.38	107.58	0.15781					37	10	5	0	0	0	1.0366	1	46112	46112		1.1933	0	1	414270000			37891	4161	18761	18839	43936	43936					0.21275632867582317
VISQDEEELTK	11	Unmodified	_VISQDEEELTK_					0	0	0			REV__NES|p.V1249Gfs*6|1|0.06|ENSG00000132688|chr1:156670442-156670443|-/C|frameshift_variant	REV__NES|p.V1249Gfs*6|1|0.06|ENSG00000132688|chr1:156670442-156670443|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877441287041	3	430.885635	1289.63508	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.478	1	15.375	14.875	15.875	0.89664								0	0	0	0.63775	1	6008	6008		2.4348	1.1051	1		+		37892	9856	18762	18840	43937	43937					0.0018441619031364098
VISRHHRFTFL	11	Unmodified	_VISRHHRFTFL_					0	0	0			REV__ENST00000582590.1_1_17:26731487-26733159:-|nuORF	REV__ENST00000582590.1_1_17:26731487-26733159:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	706.8982421755791	2	706.89912	1411.78369	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.53	1	115.71	115.21	116.21	0.18399								0	0	0	0.63775	1	50023	50023		3.2813	0.28607	1		+		37893	8770	18763	18841	43938	43938					0.09426656465211636
VITADLVTL	9	Unmodified	_VITADLVTL_					0	0	0			REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	944.5679199099541	1	944.566275	943.558998	1.07	0.0010107	1.7605	0.0016629	2.8305	0.0026736	944.5668704949386	70.829	0.23932	72.667	72.561	72.801	1.8378					11	7	2	0	0	0	0.24063	1	29753	29753		28.487	0	1	1575300	+		37894	15646	18764	18842	43939	43939					0.08496108871520391
VITADLVTL	9	Unmodified	_VITADLVTL_					0	0	0			REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	944.566275	943.558998	1.9715	0.0018622	-0.026339	-2.4879E-05	1.9452	0.0018373	944.5659306790993	71.302	0.20715	72.644	72.512	72.719	1.3415	-0.01142	-0.00067615	NaN	28.487	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1543700	+		37895	15646	18764	18842							0.08496108871520391
VITADLVTL	9	Unmodified	_VITADLVTL_					0	0	0			REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	REV__tr|A0A7D6ZH49|A0A7D6ZH49_9CLOTDHA2familyeffluxMFStransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_01470PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	944.566275	943.558998	1.07	0.0010107	1.7605	0.0016629	2.8305	0.0026736	944.5668704949386	70.829	0.23932	72.667	72.561	72.801	1.8378	0.01142	0.0010116	NaN	28.487	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1575300	+		37896	15646	18764	18842							0.08496108871520391
VITEVCQHCK	10	Unmodified	_VITEVCQHCK_					0	0	0			REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	REV__nc|ENSG00000131503|Q8IWZ3-6|ANKHD1	MSMS	GG20161007_CRH_Patient100_W632_01	3	387.1918517947197	3	387.19146	1158.55255	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.2	1	105.36	104.86	105.86	0.15859								0	0	0	0.66218	1	44753	44753		0.77653	0.4259	1		+		37897	14431	18765	18843	43940	43940					-0.02038475623157865
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.8011657595634	2	442.80002	883.585488	0.9131	0.00040432	-1.0801	-0.00047826	-0.16698	-7.3938E-05	442.8005911034658	107.8	0.28372	107.8	107.67	107.95	0					51	15	5	0	0	0	0.89008	1	46264	46264		2.5775	0	1	1656499999.9999998			37898	2252	18766	18844	43941	43941					0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.8007995486259	2	442.80002	883.585488	3.2289	0.0014298	-0.027311	-1.2093E-05	3.2016	0.0014177	442.8000716221351	106.18	0.15957	106.24	106.15	106.31	0.05455					18	7	3	0	0	0	0.89008	1	45174	45174		2.5775	0	1	122890000			37899	2252	18766	18844	43942	43942					0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.8015319705009	2	442.80002	883.585488	3.2307	0.0014306	-3.184	-0.0014099	0.046668	2.0665E-05	442.79951230373933	107.8	0.23506	107.85	107.71	107.95	0.052452					47	12	5	0	0	0	0.89008	1	46144	46144		2.5775	0	1	1309800000			37900	2252	18766	18844	43943	43943					0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5948974490166	1	884.592764	883.585488	3.0212	0.0026726	-1.9247	-0.0017026	1.0965	0.00096996	884.5908208839204	107.75	0.23689	107.91	107.79	108.03	0.15781					48	12	5	0	0	0	0.89008	1	46378	46378		2.5775	0	1	4891900000			37901	2252	18766	18844	43944	43944					0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	442.80002	883.585488	3.3808	0.001497	-6.6866	-0.0029608	-3.3058	-0.0014638	442.7991602379593	107.75	0.25409	107.91	107.77	108.03	0.15781	0.045194	-0.0029978	NaN	2.5775	51	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7243499999.999999			37902	2252	18766	18844							0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	884.592764	883.585488	3.1184	0.0027585	-2.4214	-0.002142	0.69693	0.0006165	884.5905252808554	107.73	0.23942	107.89	107.75	107.99	0.15795	-0.00654	-0.00019627	NaN	2.5775	47	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4363600000			37903	2252	18766	18844							0.13903842553509094
VITGIRII	8	Unmodified	_VITGIRII_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	442.80002	883.585488	3.3672	0.001491	-7.4343	-0.0032919	-4.067	-0.0018009	442.7989198576308	107.73	0.23942	107.89	107.75	107.99	0.15795	0.031593	-0.00366	NaN	2.5775	52	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4979300000			37904	2252	18766	18844							0.13903842553509094
VITPVLLHF	9	Unmodified	_VITPVLLHF_					0	0	0		ENSG00000175606|ENST00000312184|TMEM70;nc|ENSG00000175606|Q9BUB7-2|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1399413943291	2	519.820953	1037.62735	2.22	0.001154	2.2549	0.0011721	4.4749	0.0023261	519.8214082296022	71.373	0.48607	72.715	72.512	72.998	1.3415					22	15	2	0	0	0	0.090248	1	29948	29948		19.439	10.092	1	1123700			37905	4380	18767	18845	43945	43945					0.11004398242016578
VITPVLLHF	9	Unmodified	_VITPVLLHF_					0	0	0		ENSG00000175606|ENST00000312184|TMEM70;nc|ENSG00000175606|Q9BUB7-2|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.820953	1037.62735	0.96611	0.00050221	4.8633	0.002528	5.8294	0.0030302	519.822741352754	70.877	0.42294	72.715	72.441	72.864	1.8378	8.3994E-05	0.0013951	NaN	19.439	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1335700			37906	4380	18767	18845							0.11004398242016578
VIVDVGRVI	9	Unmodified	_VIVDVGRVI_					0	0	0		nc|ENSG00000236320|P0C7P3-2|SLFN14;ENSG00000236320|ENST00000674182|SLFN14	nc|ENSG00000236320|P0C7P3-2|SLFN14	nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.3103820681572	2	485.30821	968.601866	1.9723	0.00095719	-0.12014	-5.8307E-05	1.8522	0.00089889	485.3081175450842	53.536	0.53936	53.536	53.365	53.905	0					40	16	4	0	0	0	0.46566	1	22408	22408		17.113	0	1	11342000			37907	5321	18768	18846	43946	43946					0.11630923719621933
VIVDVGRVI	9	Unmodified	_VIVDVGRVI_					0	0	0		nc|ENSG00000236320|P0C7P3-2|SLFN14;ENSG00000236320|ENST00000674182|SLFN14	nc|ENSG00000236320|P0C7P3-2|SLFN14	nc|ENSG00000236320|P0C7P3-2|SLFN14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3101989626884	2	485.30821	968.601866	-0.33396	-0.00016207	-0.82313	-0.00039947	-1.1571	-0.00056154	485.3076958137449	51.061	0.58148	53.037	52.757	53.339	1.9753					46	22	3	0	0	0	0.66839	1	21512	21512		8.5933	0	1	24487000			37908	5321	18768	18846	43947	43947					0.11630923719621933
VIVEIPIPVP	10	Unmodified	_VIVEIPIPVP_					0	0	0			REV__ENSG00000091137|ENST00000644269|SLC26A4	REV__ENSG00000091137|ENST00000644269|SLC26A4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.7776977419853	2	538.341718	1074.66888	2.9001	0.0015612	0.92019	0.00049537	3.8203	0.0020566	538.3422649641716	63.281	0.25129	64.694	64.502	64.753	1.4134					14	7	2	0	0	0	0.12397	1	26507	26507		21.747	0	1	1247600	+		37909	8901	18769	18847	43948	43948					0.13453534210702855
VIVILIAIA	9	Unmodified	_VIVILIAIA_					0	0	0		ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	463.1365539431572	2	462.828246	923.64194	1.4771	0.00068365	-2.9426	-0.0013619	-1.4655	-0.00067827	462.8259988201226	107.51	0.11632	107.51	107.43	107.55	0					9	5	2	0	0	0	0.11957	1	46123	46123		0	0	1	4480800			37910	4698	18770	18848	43949	43949					0.17706470390157847
VIVILIAIA	9	Unmodified	_VIVILIAIA_					0	0	0		ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	ENSG00000184602|ENST00000329565|SNN	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	462.828246	923.64194	3.4079	0.0015773	-4.782	-0.0022132	-1.3741	-0.00063596	462.82550817001896	107.46	0.14019	107.51	107.44	107.58	0.052452	-0.00085192	-0.00061383	NaN	0	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6574400			37911	4698	18770	18848							0.17706470390157847
VIVIPNPV	8	Unmodified	_VIVIPNPV_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	425.7762023806572	2	425.773471	849.53239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.786	1	43.106	42.606	43.606	0.32058								0	0	0	1.0178	1	17970	17970		0.79363	0	1				37912	2472	18771	18849	43950	43950					0.10160464770854105
VIVIPNPV	8	Unmodified	_VIVIPNPV_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.7755615115166	2	425.773471	849.53239	1.4149	0.00060243	2.9119	0.0012398	4.3268	0.0018423	425.7749457020512	24.443	0.54302	25.684	25.485	26.028	1.241					58	17	5	0	0	0	0.89176	3	10211	10211;10250;10289		0.79363	0	1	150570000			37913	2472	18771	18849	43951;43952;43953	43951					0.10160464770854105
VIVIPNPV	8	Unmodified	_VIVIPNPV_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.7751953005791	2	425.773471	849.53239	0.59667	0.00025405	3.292	0.0014016	3.8887	0.0016557	425.77511658706504	24.019	0.67031	25.704	25.473	26.143	1.6845					68	21	5	0	0	0	0.89176	1	10111	10111		0.79363	0	1	133380000			37914	2472	18771	18849	43954	43954					0.10160464770854105
VIVIRYSSK	9	Unmodified	_VIVIRYSSK_					0	0	0			REV__tr|A0A7D7A0X8|A0A7D7A0X8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11470PE=4SV=1	REV__tr|A0A7D7A0X8|A0A7D7A0X8_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11470PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1910278201103	2	532.826766	1063.63898	1.6121	0.00085898	2.6058	0.0013884	4.2179	0.0022474	532.8271184289072	37.133	0.2117	37.438	37.323	37.535	0.30497					10	8	2	0	0	0	0.11333	1	15649	15649		8.5933	0	1	444400	+		37915	15817	18772	18850	43955	43955					0.1097059526537123
VIVLIIIL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VIVLIIIL_					1	0	0		ENST00000473796.1_1_7:95214955-95221973:-|nuORF	ENST00000473796.1_1_7:95214955-95221973:-|nuORF	ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	469.3398620486259	2	469.338447	936.662341	3.0747	0.0014431	-0.67044	-0.00031466	2.4043	0.0011284	469.3379708161151	75.156	0.37265	76.938	76.73	77.103	1.7817					24	11	3	0	0	0	0.5848	1	31518	31518		41.817	9.3636	1	1543200			37916	6767	18773	18851	43956	43956					0.19147641049983122
VIVLIIIL	8	Acetyl (Protein N-term)	_(Acetyl (Protein N-term))VIVLIIIL_					1	0	0		ENST00000473796.1_1_7:95214955-95221973:-|nuORF	ENST00000473796.1_1_7:95214955-95221973:-|nuORF	ENST00000473796.1_1_7:95214955-95221973:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	469.338447	936.662341	2.7758	0.0013028	-0.94427	-0.00044318	1.8315	0.00085959	469.3380706721734	75.445	0.36967	76.752	76.524	76.894	1.3063	-0.093266	-0.00012854	NaN	41.817	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1578200			37917	6767	18773	18851							0.19147641049983122
VIVRQPKLTR	10	Unmodified	_VIVRQPKLTR_					0	0	0			REV__ENSG00000104951|ENST00000391826|IL4I1	REV__ENSG00000104951|ENST00000391826|IL4I1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1992065310478	4	303.200208	1208.77173	-2.5534	-0.00077418	-1.6293	-0.00049399	-4.1826	-0.0012682	303.1997345928274	34.272	0.95454	34.272	34.1	35.055	0					65	31	3	0	0	0	0.89803	1	14573	14573		0.77653	0	1	6239600	+		37918	9159	18774	18852	43957	43957					0.17569039722025082
VIWGTDVNV	9	Unmodified	_VIWGTDVNV_					0	0	0		MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant;ENSG00000104738|ENST00000649973|MCM4	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MCM4|p.A741Lfs*8|1|0.32|ENSG00000104738|chr8:47974817-47974818|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.7661315798759	2	501.766374	1001.5182	3.0291	0.0015199	-0.71464	-0.00035858	2.3144	0.0011613	501.7658891439023	58.777	0.19205	59.102	59.056	59.248	0.32553					8	5	2	0	0	0	0.44535	1	24639	24639		18.135	2.3668	1	980870			37919	1473	18775	18853	43958	43958					0.017497675518939104
VIWIDMLL	8	Unmodified	_VIWIDMLL_					0	0	0			REV__ENST00000485364.1_1_20:31136574-31172692:-|nuORF	REV__ENST00000485364.1_1_20:31136574-31172692:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	501.6362487673759	2	501.788264	1001.56198	4.4861	0.0022511	1.8063	0.00090638	6.2924	0.0031574	501.78670557590215	90.386	0.32055	91.367	91.173	91.493	0.98157					12	9	2	0	0	0	2.3239	1	38007	38007		6.3541	0	1	798590	+		37920	13387	18776	18854	43959	43959					0.06125660724683257
VIWRESPIV	9	Unmodified	_VIWRESPIV_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	550.2193481326103	2	549.818941	1097.62333	5.2799	0.002903	-0.1753	-9.6383E-05	5.1046	0.0028066	549.8182118270053	88.298	0.22513	89.354	89.208	89.434	1.0562					12	6	2	0	0	0	0.116	1	37260	37260		2.3027	0	1	645130	+		37921	10768	18777	18855	43960	43960					0.07842308748308824
VIWWYMDEGL	10	Unmodified	_VIWWYMDEGL_					0	0	0		ENSG00000135845|ENST00000344529|PIGC	ENSG00000135845|ENST00000344529|PIGC	ENSG00000135845|ENST00000344529|PIGC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.8760558962822	3	437.874125	1310.60055	1.3379	0.00058585	2.2525	0.00098632	3.5904	0.0015722	437.875534422046	22.274	0.24777	23.451	23.291	23.539	1.177					12	7	3	0	0	0	0.85124	1	9311	9311		3.5871	0.5148	1	423150			37922	2689	18778	18856	43961	43961					-0.042330784314572156
VIWWYMDEGL	10	Unmodified	_VIWWYMDEGL_					0	0	0		ENSG00000135845|ENST00000344529|PIGC	ENSG00000135845|ENST00000344529|PIGC	ENSG00000135845|ENST00000344529|PIGC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.8751098513603	3	437.874125	1310.60055	0.58424	0.00025582	2.3932	0.0010479	2.9774	0.0013037	437.87532455142514	21.887	0.17107	23.503	23.377	23.548	1.6158					11	5	3	0	0	0	0.85124	1	9127	9127		3.5871	0.5148	1	554310			37923	2689	18778	18856	43962	43962					-0.042330784314572156
VIYEREPV	8	Unmodified	_VIYEREPV_					0	0	0		ENSG00000178750|ENST00000315099|STX19	ENSG00000178750|ENST00000315099|STX19	ENSG00000178750|ENST00000315099|STX19	MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7763854861259	2	502.7742	1003.53385	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.77	1	59.095	58.595	59.595	0.32553								0	0	0	1.0178	1	24630	24630		2.8892	0	1				37924	4491	18779	18857	43963	43963					0.03222054068953639
VIYLIMTLL	9	Unmodified	_VIYLIMTLL_					0	0	0		tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	tr|A0A553SSW2|A0A553SSW2_NIACIAminoacidABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_03800PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	539.7856933474541	2	539.832672	1077.65079	2.5759	0.0013905	0.62662	0.00033827	3.2025	0.0017288	539.833027364805	77.616	0.56568	78.897	78.663	79.229	1.2809					30	17	2	0	0	0	0.11787	1	32689	32689		2.3027	0	1	1106700			37925	16628	18780	18858	43964	43964					0.11507075964368596
VIYNTIMV	8	Unmodified	_VIYNTIMV_					0	0	0			REV__tr|A0A553SRD7|A0A553SRD7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00715PE=3SV=1	REV__tr|A0A553SRD7|A0A553SRD7_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_00715PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	477.2004882693291	2	476.762246	951.50994	2.3529	0.0011218	-0.73675	-0.00035125	1.6161	0.00077052	476.7622697591758	52.859	0.44211	52.859	52.602	53.044	0					31	13	3	0	0	0	2.3239	1	22111	22111		5.7604	0.52976	1	2233400	+		37926	15157	18781	18859	43965	43965					0.03224497310930019
VIYPARISL	9	Unmodified	_VIYPARISL_					0	0	0		nc|ENSG00000132002|P25685-2|DNAJB1;ENSG00000132002|ENST00000254322|DNAJB1;DNAJB1|p.D287Rfs*31|1|0.04|ENSG00000132002|chr19:14516105-14516106|-/C|frameshift_variant;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1;DNAJB1-MED26|1|fusion	nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3178588747978	2	516.316035	1030.61752	1.8671	0.00096401	1.6739	0.00086425	3.541	0.0018283	516.316703410827	49.078	0.37477	50.466	50.295	50.67	1.388					28	11	4	0	0	0	0.12108	1	20548	20548		53.833	13.875	1	6497700			37927	2510;418	18782	18860	43966	43966					0.10343210236646883
VKAARATR	8	Unmodified	_VKAARATR_					0	0	0			REV__ENST00000601772.1_1_19:19035054-19035967:+|nuORF	REV__ENST00000601772.1_1_19:19035054-19035967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7759582400322	2	436.774868	871.535184	2.8249	0.0012339	0.18781	8.2029E-05	3.0127	0.0013159	436.7747897649355	72.328	1.0203	73.658	73.361	74.381	1.3297					100	32	6	0	0	0	0.89181	1	30304	30304		0.6015	0	1	160180000	+		37928	14116	18783	18861	43967	43967					0.09427732948370249
VKAAVLFG	8	Unmodified	_VKAAVLFG_					0	0	0		ENSG00000010282|ENST00000441594|HHATL	ENSG00000010282|ENST00000441594|HHATL	ENSG00000010282|ENST00000441594|HHATL	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1815368533134	2	402.752539	803.490525	2.7251	0.0010975	0.35757	0.00014401	3.0827	0.0012416	402.7525510455912	88.56	0.28627	88.794	88.631	88.917	0.23471					12	8	2	0	0	0	2.3239	1	37077	37077		0.69038	0	1	383020			37929	548	18784	18862	43968	43968					0.08091909082338589
VKAKPAAI	8	Unmodified	_VKAKPAAI_					0	0	0			REV__nc|ENSG00000129422|Q9ULD2-5|MTUS1	REV__nc|ENSG00000129422|Q9ULD2-5|MTUS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2674438357353	2	399.265813	796.517074	3.0953	0.0012359	-0.085853	-3.4278E-05	3.0095	0.0012016	399.26610904711777	107.81	0.21506	107.97	107.86	108.08	0.15795					35	11	4	0	0	0	0.89176	1	46396	46396		0.79363	0	1	1347700000	+		37930	9756	18785	18863	43969	43969					0.11067597973647025
VKALLAWV	8	Unmodified	_VKALLAWV_					0	0	0			REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1280700564384	3	300.528618	898.564024	-2.562	-0.00076996	-1.3328	-0.00040056	-3.8949	-0.0011705	300.5282467547294	34.229	0.33088	34.229	34.039	34.37	0					17	10	2	0	0	0	2.3239	1	14365	14365		0.45834	0	1	3157700	+		37931	12518	18786	18864	43970	43970					0.11068457524788755
VKALLAWV	8	Unmodified	_VKALLAWV_					0	0	0			REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	300.528618	898.564024	0.62796	0.00018872	-3.2194	-0.00096751	-2.5914	-0.00077879	300.5273765869346	33.633	0.41595	33.93	33.699	34.115	0.29701	-0.031936	-0.00044155	NaN	0.45834	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2562600	+		37932	12518	18786	18864							0.11068457524788755
VKALLAWV	8	Unmodified	_VKALLAWV_					0	0	0			REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	REV__ENST00000344423.9_1_8:28206100-28206229:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	300.528618	898.564024	-0.66493	-0.00019983	-4.0455	-0.0012158	-4.7104	-0.0014156	300.52740387283495	32.448	0.33026	33.726	33.557	33.887	1.2782	-0.23576	-0.0011864	NaN	0.45834	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2490100	+		37933	12518	18786	18864							0.11068457524788755
VKALPGGL	8	Unmodified	_VKALPGGL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7463561892509	2	377.744714	753.474875	0.47778	0.00018048	3.5235	0.001331	4.0013	0.0015115	377.74602521998673	20.056	0.21696	20.266	20.128	20.345	0.21024					10	6	2	0	0	0	0.89198	1	8338	8338		0	0	1	303960			37934	501	18787	18865	43971	43971					0.08827622565297588
VKALPGGL	8	Unmodified	_VKALPGGL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7462951540947	2	377.744714	753.474875	1.9587	0.00073988	2.7811	0.0010505	4.7398	0.0017904	377.74560509741656	72.742	1.6542	73.067	72.674	74.328	0.32494					105	52	5	0	0	0	0.89198	1	30460	30460		0	0	1	8495900			37935	501	18787	18865	43972	43972					0.08827622565297588
VKALPGGL	8	Unmodified	_VKALPGGL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7463867068291	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.377	1	19.825	19.325	20.325	1.448								0	0	0	1.0178	1	7643	7643		0	0	1				37936	501	18787	18865	43973	43973					0.08827622565297588
VKALPGGL	8	Unmodified	_VKALPGGL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	377.744714	753.474875	-1.3412	-0.00050665	5.2588	0.0019865	3.9176	0.0014798	377.7466120012981	20.08	0.18564	20.08	19.979	20.165	0	-0.10062	0.0012182	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	292420			37937	501	18787	18865							0.08827622565297588
VKALPGGL	8	Unmodified	_VKALPGGL_					0	0	0		ENSG00000006071|ENST00000389817|ABCC8;nc|ENSG00000006071|Q09428-2|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	ENSG00000006071|ENST00000389817|ABCC8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	377.744714	753.474875	0.08426	3.1829E-05	1.0964	0.00041417	1.1807	0.000446	377.7451158289972	18.747	0.21304	20.195	20.09	20.303	1.448	0.014604	-0.0019264	NaN	0	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	257970			37938	501	18787	18865							0.08827622565297588
VKALPIIFLL	10	Unmodified	_VKALPIIFLL_					0	0	0		tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	tr|A0A553SUP9|A0A553SUP9_NIACIDUF2812domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_04015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1126.763598620892	1	1126.75983	1125.75255	2.7799	0.0031323	0.33347	0.00037574	3.1134	0.003508	1126.7596373190133	104.19	0.080505	104.35	104.3	104.38	0.16055					26	7	4	0	0	0	0.89803	1	44078	44078		0	0	1	730170000			37939	16702	18788	18866	43974	43974					0.1947069037842084
VKASSVLR	8	Unmodified	_VKASSVLR_					0	0	0		nc|ENSG00000119509|Q9Y283-2|INVS;ENSG00000119509|ENST00000262457|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	430.2734252810478	2	430.271627	858.528701	3.2367	0.0013927	2.32	0.00099823	5.5567	0.0023909	430.2730415615538	104.47	0.16784	104.63	104.58	104.75	0.16055					21	8	4	0	0	0	0.88163	1	44264	44264		7.9102	0	1	69704000			37940	2073	18789	18867	43975	43975					0.09377794996987632
VKASSVLR	8	Unmodified	_VKASSVLR_					0	0	0		nc|ENSG00000119509|Q9Y283-2|INVS;ENSG00000119509|ENST00000262457|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	nc|ENSG00000119509|Q9Y283-2|INVS	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	430.271627	858.528701	3.2937	0.0014172	0.051355	2.2097E-05	3.345	0.0014393	430.27169532017444	104.43	0.091354	104.61	104.56	104.65	0.1731	0.015195	-0.00063714	NaN	7.9102	16	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	68984000			37941	2073	18789	18867							0.09377794996987632
VKCGGGGG	8	Unmodified	_VKCGGGGG_					0	0	0		ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1914855837822	2	317.652499	633.290445	1.2354	0.00039242	0.35494	0.00011275	1.5903	0.00050517	317.65258806692253	72.37	0.21942	72.695	72.547	72.767	0.32494					10	6	2	0	0	0	2.3239	1	30258	30258		0	0	1	92008			37942	751	18790	18868	43976	43976					-0.04086888856920723
VKCGGGGG	8	Unmodified	_VKCGGGGG_					0	0	0		ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	ENSG00000061455|ENST00000407847|PRDM6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1912414431572	2	317.652499	633.290445	1.1492	0.00036503	1.0875	0.00034546	2.2367	0.00071049	317.6528382787869	72.122	0.28652	72.447	72.196	72.483	0.32494					12	8	2	0	0	0	2.3239	1	30092	30092		0	0	1	148610			37943	751	18790	18868	43977	43977					-0.04086888856920723
VKCKRHRP	8	Unmodified	_VKCKRHRP_					0	0	0		nc|ENSG00000135317|Q9Y5W7-3|SNX14;nc|ENSG00000135317|Q9Y5W7-4|SNX14;ENSG00000135317|ENST00000314673|SNX14;ENST00000508980.5_1_6:86270935-86284080:-|nuORF;nc|ENSG00000135317|Q9Y5W7-2|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	nc|ENSG00000135317|Q9Y5W7-3|SNX14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.3057739138603	2	512.30327	1022.59199	3.4505	0.0017677	1.2317	0.00063098	4.6822	0.0023987	512.3039970144534	103.45	0.080673	103.61	103.56	103.64	0.16445					7	3	3	0	0	0	0.89198	1	43614	43614		0	0	1	120420000			37944	2656	18791	18869	43978	43978					0.08159457233239209
VKDLLSGDS	9	Unmodified	_VKDLLSGDS_					0	0	0		nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7;ENSG00000181827|ENST00000559447|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	467.2505676150322	2	467.248015	932.481476	2.883	0.0013471	-1.2457	-0.00058206	1.6373	0.00076502	467.24878869322635	85.414	1.1919	86.573	86.303	87.495	1.159					147	48	5	0	0	0	0.83213	5	35817	35817;35872;35938;36002;36067		2.0598	0	1	57648000			37945	4587	18792	18870	43979;43980;43981;43982;43983	43979					0.012534709353417384
VKDLLSGDS	9	Unmodified	_VKDLLSGDS_					0	0	0		nc|ENSG00000181827|Q2KHR2-1|RFX7;nc|ENSG00000181827|Q2KHR2-2|RFX7;ENSG00000181827|ENST00000559447|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	nc|ENSG00000181827|Q2KHR2-1|RFX7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	467.2501708865166	2	467.248015	932.481476	4.1628	0.001945	1.0963	0.00051222	5.259	0.0024573	467.2485631812606	86.024	0.31844	87.571	87.371	87.69	1.547					20	12	2	0	0	0	0.83213	1	36223	36223		2.0598	0	1	39426000			37946	4587	18792	18870	43984	43984					0.012534709353417384
VKEIKKQQERY	11	Unmodified	_VKEIKKQQERY_					0	0	0			REV__tr|A0A553SI92|A0A553SI92_NIACIStageIIsporulationproteinDOS=NialliacirculansOX=1397GN=spoIIDPE=4SV=1	REV__tr|A0A553SI92|A0A553SI92_NIACIStageIIsporulationproteinDOS=NialliacirculansOX=1397GN=spoIIDPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.6122924685478	3	483.612181	1447.81471	1.4425	0.0006976	0.31363	0.00015167	1.7561	0.00084928	483.61227748606217	23.987	0.2499	25.228	25.082	25.331	1.241					18	7	3	0	0	0	0.97115	1	10022	10022		5.5233	2.68	1	781690	+		37947	14843	18793	18871	43985	43985					0.10871764988792165
VKEIKKQQERY	11	Unmodified	_VKEIKKQQERY_					0	0	0			REV__tr|A0A553SI92|A0A553SI92_NIACIStageIIsporulationproteinDOS=NialliacirculansOX=1397GN=spoIIDPE=4SV=1	REV__tr|A0A553SI92|A0A553SI92_NIACIStageIIsporulationproteinDOS=NialliacirculansOX=1397GN=spoIIDPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	483.612181	1447.81471	1.4425	0.0006976	0.31363	0.00015167	1.7561	0.00084928	483.61227748606217	23.987	0.2499	25.228	25.082	25.331	1.241	0.013752	-0.00065765	NaN	5.5233	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	781690	+		37948	14843	18793	18871							0.10871764988792165
VKELPKVV	8	Unmodified	_VKELPKVV_					0	0	0			REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2482482790947	3	304.535661	910.585153	-0.39424	-0.00012006	2.9245	0.0008906	2.5302	0.00077054	304.536480577642	14.695	0.27902	14.808	14.666	14.945	0.11295					19	8	3	0	0	0	2.3239	1	6064	6064		0	0	1	2593700	+		37949	9062	18794	18872	43986	43986					0.1262842283366581
VKELPKVV	8	Unmodified	_VKELPKVV_					0	0	0			REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5359374880791	3	304.535661	910.585153	-1.2247	-0.00037297	1.7685	0.00053857	0.54377	0.0001656	304.53608189316446	14.146	0.19719	14.915	14.793	14.99	0.76937					20	8	3	0	0	0	0.89181	1	5867	5867		0.35063	0	1	2781800	+		37950	9062	18794	18872	43987	43987					0.1262842283366581
VKELPKVV	8	Unmodified	_VKELPKVV_					0	0	0			REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5364868044853	3	304.535661	910.585153	-0.42216	-0.00012856	1.9684	0.00059944	1.5462	0.00047088	304.53621423411187	16.191	0.52188	17.23	17.062	17.584	1.0392					63	18	4	0	0	0	0.89051	1	6808	6808		1.4819	0	1	20601000	+		37951	9062	18794	18872	43988	43988					0.1262842283366581
VKELPKVV	8	Unmodified	_VKELPKVV_					0	0	0			REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	305.2517578005791	3	304.535661	910.585153	-0.56679	-0.00017261	3.0356	0.00092445	2.4688	0.00075184	304.5365378183226	12.642	0.21532	13.429	13.331	13.547	0.78751					16	6	3	0	0	0	2.3239	1	5287	5287		0.45834	0	1	875750	+		37952	9062	18794	18872	43989	43989					0.1262842283366581
VKELPKVV	8	Unmodified	_VKELPKVV_					0	0	0			REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	REV__ENST00000477777.1_1_X:153713880-153714433:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2482177615166	3	304.535661	910.585153	-0.52794	-0.00016078	2.6969	0.00082129	2.1689	0.00066052	304.5362213899266	13.608	0.15108	14.436	14.365	14.516	0.82789					7	4	2	0	0	0	2.3239	1	5675	5675		0	0	1	698060	+		37953	9062	18794	18872	43990	43990					0.1262842283366581
VKELRGKKTAV	11	Unmodified	_VKELRGKKTAV_					0	0	0		ENST00000497615.1_1_1:1685693-1686165:-|nuORF;nc|ENSG00000008130|O95544-3|NADK;ENSG00000008130|ENST00000341426|NADK;nc|ENSG00000008130|O95544-2|NADK	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2663452029228	3	410.262712	1227.76631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.481	1	71.481	70.981	71.981	0								0	0	0	0.63775	1	29769	29769		0.50596	0.051438	1				37954	526	18795	18873	43991	43991					0.1615331613957096
VKERPKLKWMK	11	Unmodified	_VKERPKLKWMK_					0	0	0			REV__ENST00000549086.2_1_12:53594948-53600469:-|nuORF	REV__ENST00000549086.2_1_12:53594948-53600469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.9635803103447	3	481.626997	1441.85916	1.688	0.000813	1.2337	0.0005942	2.9218	0.0014072	481.6280107246116	97.05	0.33546	97.05	96.862	97.197	0					18	10	2	0	0	0	1.0402	1	40551	40551		0.094841	0	1	746750	+		37955	13817	18796	18874	43992	43992					0.1559049760128346
VKFLIYLIYLF	11	Unmodified	_VKFLIYLIYLF_					0	0	0			REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.1973449587822	3	477.959859	1430.85775	2.9448	0.0014075	-1.8794	-0.00089829	1.0654	0.0005092	477.957949570538	85.862	0.43506	85.862	85.697	86.132	0					20	13	2	0	0	0	0.14606	1	35796	35796		0.094841	0	1	581590	+		37956	14479	18797	18875	43993	43993					0.15955186784162834
VKFLIYLIYLF	11	Unmodified	_VKFLIYLIYLF_					0	0	0			REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	477.959859	1430.85775	3.3671	0.0016094	-1.2569	-0.00060077	2.1102	0.0010086	478.2944475665576	85.886	0.18172	86.139	86.068	86.25	0.25227	0.061834	-0.0013391	NaN	0.094841	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	527290	+		37957	14479	18797	18875							0.15955186784162834
VKFLIYLIYLF	11	Unmodified	_VKFLIYLIYLF_					0	0	0			REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	477.959859	1430.85775	2.2964	0.0010976	1.3758	0.00065756	3.6721	0.0017551	477.9598876348351	84.882	0.18353	86.041	85.995	86.179	1.159	-0.035725	0.0024359	NaN	0.094841	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	636640	+		37958	14479	18797	18875							0.15955186784162834
VKFLIYLIYLF	11	Unmodified	_VKFLIYLIYLF_					0	0	0			REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	REV__nc|ENSG00000166405|Q7Z5B4-2|RIC3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	477.959859	1430.85775	2.6268	0.0012555	0.96233	0.00045996	3.5891	0.0017155	478.2954047449457	84.669	0.18553	86.266	86.126	86.311	1.5962	0.18864	0.0018431	NaN	0.094841	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565770	+		37959	14479	18797	18875							0.15955186784162834
VKFLNQQYI	9	Unmodified	_VKFLNQQYI_					0	0	0		tr|A0A553SF99|A0A553SF99_NIACI3D-(3,5/4)-trihydroxycyclohexane-1,2-dionehydrolaseOS=NialliacirculansOX=1397GN=iolDPE=3SV=1	tr|A0A553SF99|A0A553SF99_NIACI3D-(3,5/4)-trihydroxycyclohexane-1,2-dionehydrolaseOS=NialliacirculansOX=1397GN=iolDPE=3SV=1	tr|A0A553SF99|A0A553SF99_NIACI3D-(3,5/4)-trihydroxycyclohexane-1,2-dionehydrolaseOS=NialliacirculansOX=1397GN=iolDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8256713747978	2	576.824224	1151.63389	2.5006	0.0014424	-0.2203	-0.00012707	2.2803	0.0013153	576.8242688346253	76.766	0.43757	78.06	77.825	78.262	1.2938					39	13	4	0	0	0	0.34572	1	32204	32204		23.148	0.41214	1	9553700			37960	16047	18798	18876	43994	43994					0.06414291402757044
VKGALGRVI	9	Unmodified	_VKGALGRVI_					0	0	0		ENSG00000280236|ENST00000642051|OR12D2	ENSG00000280236|ENST00000642051|OR12D2	ENSG00000280236|ENST00000642051|OR12D2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5364562869072	3	304.871155	911.591636	-1.2546	-0.0003825	2.0497	0.00062489	0.79508	0.0002424	304.8717838528591	13.916	0.15362	14.642	14.565	14.719	0.72639					7	4	2	0	0	0	0.11938	1	5786	5786		1.1933	0	1	438190			37961	5483	18799	18877	43995	43995					0.1323036078503037
VKGFLVGL	8	Unmodified	_VKGFLVGL_					0	0	0			REV__ENST00000413175.2_1_1:155403304-155403850:+|nuORF	REV__ENST00000413175.2_1_1:155403304-155403850:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	416.2657043337822	2	416.768189	831.521825	0.16936	7.0583E-05	2.2771	0.00094902	2.4465	0.0010196	416.76834171480584	101.89	0.21585	101.89	101.74	101.96	0					11	6	2	0	0	0	2.3239	1	42674	42674		0.79363	0	1	555570	+		37962	11787	18800	18878	43996	43996					0.09932482116437313
VKGFLVGL	8	Unmodified	_VKGFLVGL_					0	0	0			REV__ENST00000413175.2_1_1:155403304-155403850:+|nuORF	REV__ENST00000413175.2_1_1:155403304-155403850:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	416.2666808962822	2	416.768189	831.521825	2.9942	0.0012479	1.3599	0.00056677	4.3542	0.0018147	416.7683468208829	101.84	0.21979	101.9	101.76	101.98	0.067009					10	6	2	0	0	0	2.3239	1	42650	42650		0.79363	0	1	586470	+		37963	11787	18800	18878	43997	43997					0.09932482116437313
VKGGVAPP	8	Unmodified	_VKGGVAPP_					0	0	0		ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	2	362.721239	723.427924	-0.92625	-0.00033597	-3.3581	-0.001218	-4.2843	-0.001554	362.7203273404389	71.844	0.47458	71.844	71.573	72.047	0					29	14	3	0	0	0	2.3239	1	29829	29829		0	0	1	4033300			37964	5988	18801	18879	43998	43998					0.055147630141391346
VKGGVAPP	8	Unmodified	_VKGGVAPP_					0	0	0		ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	362.721239	723.427924	1.4295	0.00051852	-4.1443	-0.0015032	-2.7148	-0.0009847	362.7198653938692	71.574	0.54063	71.897	71.622	72.163	0.32359	-0.024753	-4.5523E-05	NaN	0	36	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3063600			37965	5988	18801	18879							0.055147630141391346
VKGGVAPP	8	Unmodified	_VKGGVAPP_					0	0	0		ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	362.721239	723.427924	1.871	0.00067863	-4.1849	-0.001518	-2.314	-0.00083933	362.7199534719531	70.567	0.4812	71.921	71.679	72.161	1.3536	-0.0011792	-7.5023E-05	NaN	0	26	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2946300			37966	5988	18801	18879							0.055147630141391346
VKGGVAPP	8	Unmodified	_VKGGVAPP_					0	0	0		ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	ENST00000356458.6_1_2:54951732-54951912:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	362.721239	723.427924	1.7819	0.00064634	-4.7284	-0.0017151	-2.9464	-0.0010687	362.71963422388666	70.188	0.47586	72.025	71.784	72.26	1.8378	0.10353	-0.00046925	NaN	0	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2901600			37967	5988	18801	18879							0.055147630141391346
VKGSGRVL	8	Unmodified	_VKGSGRVL_					0	0	0		ENSG00000219607|ENST00000405617|PPP1R3G	ENSG00000219607|ENST00000405617|PPP1R3G	ENSG00000219607|ENST00000405617|PPP1R3G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.2596008181572	2	408.25852	814.502486	3.157	0.0012889	-0.34149	-0.00013941	2.8155	0.0011495	408.25851613169004	104.42	0.1744	104.59	104.52	104.7	0.17309					15	8	4	0	0	0	0.89051	1	44172	44172		2.3027	0	1	59010000			37968	5267	18802	18880	43999	43999					0.08781525825509107
VKGSPVGV	8	Unmodified	_VKGSPVGV_					0	0	0			REV__ENSG00000104427|ENST00000263849|ZC2HC1A	REV__ENSG00000104427|ENST00000263849|ZC2HC1A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	371.1008483767509	2	371.726521	741.438489	0.26429	9.8244E-05	2.4978	0.00092849	2.7621	0.0010267	371.7273865767976	17.058	0.30247	17.209	17.027	17.33	0.15093					15	9	2	0	0	0	2.3239	1	7109	7109		0.79363	0	1	1088700	+		37969	9136	18803	18881	44000	44000					0.05742745668578664
VKGSPVGV	8	Unmodified	_VKGSPVGV_					0	0	0			REV__ENSG00000104427|ENST00000263849|ZC2HC1A	REV__ENSG00000104427|ENST00000263849|ZC2HC1A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	371.726521	741.438489	-0.62075	-0.00023075	4.3408	0.0016136	3.7201	0.0013828	371.7279864959911	16.304	0.25184	17.13	17.045	17.297	0.82643	-0.028022	0.00058203	NaN	0.79363	21	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1299600	+		37970	9136	18803	18881							0.05742745668578664
VKGSPVGV	8	Unmodified	_VKGSPVGV_					0	0	0			REV__ENSG00000104427|ENST00000263849|ZC2HC1A	REV__ENSG00000104427|ENST00000263849|ZC2HC1A	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	371.726521	741.438489	-0.061876	-2.3001E-05	3.7754	0.0014034	3.7135	0.0013804	371.72789349509253	16.096	0.21071	17.136	17.037	17.248	1.0392	-0.022778	0.00016166	NaN	0.79363	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2547600	+		37971	9136	18803	18881							0.05742745668578664
VKHKVDLF	8	Unmodified	_VKHKVDLF_					0	0	0		ENSG00000088538|ENST00000266037|DOCK3;DOCK3|p.K1465Pfs*18|1|0.29|ENSG00000088538|chr3:51356230-51356231|-/TCCCCTCACCTTTCACACACAGCTTCCTTGGGGACCA|frameshift_variant	ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.2960693240166	2	493.295102	984.575651	1.4801	0.00073014	-0.11293	-5.571E-05	1.3672	0.00067443	493.2953338467376	78.471	1.0488	78.471	78.095	79.144	0					73	33	3	0	0	0	0.89178	2	32710	32710;32761		0.69038	0	1	1460700			37972	1104	18804	18882	44001;44002	44001					0.08274654548131366
VKHRKKSLIRL	11	Unmodified	_VKHRKKSLIRL_					0	0	0		nc|ENSG00000054654|Q8WXH0|SYNE2;ENSG00000054654|ENST00000555002|SYNE2;ENST00000557005.1_1_14:64469755-64489638:+|nuORF	nc|ENSG00000054654|Q8WXH0|SYNE2	nc|ENSG00000054654|Q8WXH0|SYNE2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2370178103447	4	345.234582	1376.90922	-0.11881	-4.1016E-05	3.5997	0.0012427	3.4809	0.0012017	345.2369112999973	27.017	0.84543	28.289	28.145	28.99	1.2715					45	27	3	0	0	0	1.0402	1	11286	11286		0.094841	0	1	2950100			37973	716	18805	18883	44003	44003					0.23584368321462534
VKIKLTVIKK	10	Unmodified	_VKIKLTVIKK_					0	0	0			REV__tr|A0A553SU30|A0A553SU30_NIACIBeta-glucuronidaseOS=NialliacirculansOX=1397GN=CEQ21_06195PE=3SV=1	REV__tr|A0A553SU30|A0A553SU30_NIACIBeta-glucuronidaseOS=NialliacirculansOX=1397GN=CEQ21_06195PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.4217407107353	2	585.420834	1168.82712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.58	1	106.74	106.24	107.24	0.15781								0	0	0	0.66264	1	45676	45676		0	0	1		+		37974	15276	18806	18884	44004	44004					0.24945453189752698
VKINPWEL	8	Unmodified	_VKINPWEL_					0	0	0			REV__ENST00000534961.5_1_8:42742976-42751856:-|nuORF	REV__ENST00000534961.5_1_8:42742976-42751856:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.2902404665947	2	499.78711	997.559667	2.1128	0.001056	-2.1872	-0.0010931	-0.074389	-3.7179E-05	499.7846890986509	47.998	0.46043	49.975	49.775	50.236	1.9772					18	14	2	0	0	0	2.3239	1	20046	20046		4.756	0	1	931490	+		37975	13738	18807	18885	44005	44005					0.06078948311221666
VKISGGRR	8	Unmodified	_VKISGGRR_					0	0	0			REV__ENST00000319481.7_1_18:21743105-21745110:-|nuORF	REV__ENST00000319481.7_1_18:21743105-21745110:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7760497927666	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89178	1	30756	30756		0.69038	0	1	532050000	+		37976	12398	18808	18886	44006	44006					0.09427732948370249
VKISIVKLIL	10	Unmodified	_VKISIVKLIL_					0	0	0		tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	tr|A0A553SID8|A0A553SID8_NIACIGluconatepermeaseOS=NialliacirculansOX=1397GN=CEQ21_14685PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	563.4040405154228	2	563.40211	1124.78967	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.28	1	106.44	105.94	106.94	0.15781								0	0	0	0.66264	1	45482	45482		0	0	1				37977	16190	18809	18887	44007	44007					0.23226361924184857
VKITKTQL	8	Unmodified	_VKITKTQL_					0	0	0			REV__ELAVL4|p.F332Sfs*14|1|0.04|ENSG00000162374|chr1:50201028-50201028|C/-|frameshift_variant	REV__ELAVL4|p.F332Sfs*14|1|0.04|ENSG00000162374|chr1:50201028-50201028|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	466.6096374392509	2	465.80276	929.590967	3.2752	0.0015256	-0.080572	-3.7531E-05	3.1947	0.0014881	465.8026837683495	87.267	0.28898	87.511	87.361	87.65	0.24387					15	9	2	0	0	0	2.3239	1	36581	36581		0.69038	0	1	2011200	+		37978	8472	18810	18888	44008	44008					0.12335521345323741
VKKAVSIP	8	Unmodified	_VKKAVSIP_					0	0	0		tr|A0A7D6ZZV1|A0A7D6ZZV1_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=dusBPE=3SV=1	tr|A0A7D6ZZV1|A0A7D6ZZV1_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=dusBPE=3SV=1	tr|A0A7D6ZZV1|A0A7D6ZZV1_9CLOTtRNA-dihydrouridinesynthaseOS=ClostridiumintestinaleOX=36845GN=dusBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.2799255251884	2	421.278921	840.543289	3.2318	0.0013615	3.016	0.0012706	6.2479	0.0026321	421.2808786966656	107.77	0.23722	107.93	107.81	108.05	0.15795					37	12	4	0	0	0	0.89178	1	46462	46462		0.69038	0	1	2117099999.9999998			37979	17213	18811	18889	44009	44009					0.11663867145136919
VKKFKARIK	9	Unmodified	_VKKFKARIK_					0	0	0			REV__tr|A0A7D6VPP0|A0A7D6VPP0_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12255PE=4SV=1	REV__tr|A0A7D6VPP0|A0A7D6VPP0_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12255PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1117.759326159954	1	1117.75681	1116.74953	2.7822	0.0031098	-1.5075	-0.0016851	1.2746	0.0014247	1117.7552381017408	108.1	0.099777	108.26	108.2	108.3	0.15781					21	12	2	0	0	0	0.85403	1	46645	46645		0	0	1	82842000	+		37980	15358	18812	18890	44010	44010					0.1958286004423826
VKKFKARIK	9	Unmodified	_VKKFKARIK_					0	0	0			REV__tr|A0A7D6VPP0|A0A7D6VPP0_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12255PE=4SV=1	REV__tr|A0A7D6VPP0|A0A7D6VPP0_9CLOTPyridoxamine5'-phosphateoxidasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12255PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3829223513603	2	559.382043	1116.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.86	1	111.02	110.52	111.52	0.16198								0	0	0	0.42693	1	48129	48129		0	0	1		+		37981	15358	18812	18890	44011	44011					0.1958286004423826
VKKGTAAD	8	Unmodified	_VKKGTAAD_					0	0	0			REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	395.2256652712822	2	395.226885	788.439217	0.018043	7.1312E-06	-2.3702	-0.00093677	-2.3522	-0.00092964	395.22582885063474	67.213	0.57988	67.213	66.924	67.504	0					40	18	3	0	0	0	0.89051	1	27962	27962		2.3027	0	1	14824000	+		37982	9744	18813	18891	44012	44012					0.036535403176003456
VKKGTAAD	8	Unmodified	_VKKGTAAD_					0	0	0			REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.2271606326103	2	395.226885	788.439217	1.8643	0.0007368	-3.5008	-0.0013836	-1.6366	-0.00064682	395.22525371852765	67.037	0.49307	67.36	67.126	67.619	0.32269					39	16	3	0	0	0	0.89051	1	28011	28011		2.3027	0	1	13356000	+		37983	9744	18813	18891	44013	44013					0.036535403176003456
VKKGTAAD	8	Unmodified	_VKKGTAAD_					0	0	0			REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	REV__ENST00000566011.5_1_15:74234368-74244175:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.2270385622978	2	395.226885	788.439217	1.5526	0.00061362	-2.0443	-0.00080795	-0.49169	-0.00019433	395.2259957037468	66.044	0.54657	67.443	67.152	67.699	1.3989					39	17	3	0	0	0	0.89051	1	27646	27646		2.3027	0	1	6401000	+		37984	9744	18813	18891	44014	44014					0.036535403176003456
VKKHRRAR	8	Unmodified	_VKKHRRAR_					0	0	0			REV__ENSG00000138756|ENST00000502613|BMP2K	REV__ENSG00000138756|ENST00000502613|BMP2K	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.1815673708916	3	350.896698	1049.66826	0.86388	0.00030313	-2.2016	-0.00077254	-1.3377	-0.0004694	350.89593958143377	45.409	1.2063	46.774	46.433	47.639	1.3653					66	37	2	0	0	0	2.3239	1	18893	18893		0	0	1	15596000	+		37985	10077	18814	18892	44015	44015					0.14541597124866712
VKKKDIREFL	10	Unmodified	_VKKKDIREFL_					0	0	0		ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENST00000439124.1_1_6:64325734-64326112:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	425.9316589236259	3	425.930962	1274.77106	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.10726	1	0.77464	0.27464	1.2746	0.66738								0	0	0	0.66254	1	43	43		0.15932	0	1				37986	6545	18815	18893	44016	44016					0.1446620028232246
VKKKGRRKKRK	11	Unmodified	_VKKKGRRKKRK_					0	0	0			REV__nc|ENSG00000131437|Q9Y496|KIF3A	REV__nc|ENSG00000131437|Q9Y496|KIF3A	MSMS	GG20161007_CRH_Patient100_W632_01	3	471.3311035037041	3	471.331794	1410.97355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.15	1	110.31	109.81	110.81	0.16133								0	0	0	0.63775	1	47857	47857		0	0	1		+		37987	14429	18816	18894	44017	44017					0.28450568198218207
VKKKKFHP	8	Unmodified	_VKKKKFHP_					0	0	0			REV__ENSG00000237765|ENST00000422728|FAM200B	REV__ENSG00000237765|ENST00000422728|FAM200B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	337.8872863650322	3	337.886917	1010.63892	-0.17109	-5.7809E-05	0.81224	0.00027445	0.64116	0.00021664	337.8871919199001	18.253	0.35592	19.701	19.552	19.908	1.448					20	11	3	0	0	0	0.89178	1	7612	7612		0.40072	0	1	484580	+		37988	11911	18817	18895	44018	44018					0.13402640056028758
VKKKKKEKK	9	Unmodified	_VKKKKKEKK_					0	0	0			REV__ENST00000337672.7_2_11:57471767-57471908:-|nuORF	REV__ENST00000337672.7_2_11:57471767-57471908:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	572.4004394412041	2	572.400433	1142.78631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104	1	104.06	103.56	104.56	0.059502								0	0	0	0.42693	1	43770	43770		0	0	1		+		37989	12475	18818	18896	44019	44019					0.22063111870147623
VKKPIKTA	8	Unmodified	_VKKPIKTA_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5947753787041	1	884.592764	883.585488	3.0217	0.0026729	-0.89253	-0.00078953	2.1291	0.0018834	884.5918820217089	108.33	0.9708	108.49	108.32	109.29	0.15781					94	50	3	0	0	0	0.89178	1	46939	46939		0.69038	0	1	80099000	+		37990	11838	18819	18897	44020	44020					0.13903842553497725
VKKPIKTA	8	Unmodified	_VKKPIKTA_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5946533083916	1	884.592764	883.585488	3.1209	0.0027608	-1.1378	-0.0010065	1.9831	0.0017542	884.5915851080885	106.14	0.19696	106.3	106.2	106.4	0.16174					36	10	5	0	0	0	0.89178	1	45376	45376		0.69038	0	1	568070000	+		37991	11838	18819	18897	44021	44021					0.13903842553497725
VKKPIKTA	8	Unmodified	_VKKPIKTA_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	884.5939819216728	1	884.592764	883.585488	3.1171	0.0027574	-1.823	-0.0016126	1.2941	0.0011447	884.5908155839875	108.3	0.61237	108.45	108.37	108.98	0.15795					58	30	2	0	0	0	0.89051	1	46717	46717		2.3027	1.5091	1	20856000	+		37992	11838	18819	18897	44022	44022					0.13903842553497725
VKKPPSLV	8	Unmodified	_VKKPPSLV_					0	0	0		tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	867.5671264529228	1	867.566215	866.558939	1.1845	0.0010276	1.0222	0.00088681	2.2067	0.0019144	867.5668180326942	107.81	0.22746	107.81	107.68	107.91	0					43	12	5	0	0	0	0.89176	1	46342	46342		0.79363	0	1	523580000			37993	16180	18820	18898	44023	44023					0.12032153662187284
VKKPPSLV	8	Unmodified	_VKKPPSLV_					0	0	0		tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	tr|A0A553SI30|A0A553SI30_NIACIUracil-DNAglycosylaseOS=NialliacirculansOX=1397GN=ungPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	867.566215	866.558939	3.0352	0.0026332	-1.4864	-0.0012896	1.5487	0.0013436	867.5647092540939	107.75	0.25156	107.91	107.79	108.04	0.15781	0.053685	-0.00086358	NaN	0.79363	48	13	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5321100000			37994	16180	18820	18898							0.12032153662187284
VKKPVMVIGTC	11	Unmodified	_VKKPVMVIGTC_					0	0	0		ENSG00000136999|ENST00000259526|CCN3	ENSG00000136999|ENST00000259526|CCN3	ENSG00000136999|ENST00000259526|CCN3	MSMS	GG20161007_CRH_Patient100_W632_02	4	392.2278930544853	3	392.227734	1173.66137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.16	1	101.35	100.85	101.85	0.19076								0	0	0	0.63775	1	42535	42535		0.40827	0	1				37995	2755	18821	18899	44024	44024					0.08148735347140246
VKKQLKKH	8	Unmodified	_VKKQLKKH_					0	0	0		nc|ENSG00000124541|Q96EU6-2|RRP36;ENSG00000124541|ENST00000244496|RRP36	nc|ENSG00000124541|Q96EU6-2|RRP36	nc|ENSG00000124541|Q96EU6-2|RRP36	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8949767947197	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.36	1	119.53	119.03	120.03	0.16584								0	0	0	1.0178	1	51503	51503		0.45834	0	1				37996	2231	18822	18900	44025	44025					0.15686025084733046
VKKQRRKKLTT	11	Unmodified	_VKKQRRKKLTT_					0	0	0		nc|ENSG00000135439|Q99490-2|AGAP2;nc|ENSG00000135439|Q99490|AGAP2;ENSG00000135439|ENST00000547588|AGAP2	nc|ENSG00000135439|Q99490-2|AGAP2	nc|ENSG00000135439|Q99490-2|AGAP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	462.6411620974541	3	462.640294	1384.89905	3.3616	0.0015552	-1.2985	-0.00060074	2.0631	0.00095447	462.639339765951	107.25	0.18925	107.41	107.32	107.51	0.15781					22	9	4	0	0	0	1.037	1	46105	46105		0.36667	0.28332	1	23000000			37997	2665	18823	18901	44026	44026					0.22199760596186024
VKKRKEKTA	9	Unmodified	_VKKRKEKTA_					0	0	0		ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	ENSG00000124784|ENST00000379834|RIOK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3536254763603	2	544.35094	1086.68733	3.0611	0.0016663	1.5593	0.00084879	4.6204	0.0025151	544.351718638933	106.01	0.20889	106.17	106.06	106.27	0.15859					33	10	4	0	0	0	0.85019	1	45266	45266		0.52476	0	1	1073499999.9999999			37998	2243	18824	18902	44027	44027					0.1474508890528341
VKKRRKPK	8	Unmodified	_VKKRRKPK_					0	0	0			REV__ENSG00000135392|ENST00000678005|DNAJC14	REV__ENSG00000135392|ENST00000678005|DNAJC14	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2440368533134	3	347.245215	1038.71382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.41	1	100.41	99.91	100.91	0								0	0	0	1.0178	1	42033	42033		0.40072	0	1		+		37999	9938	18825	18903	44028	44028					0.19600822587244693
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5078002810478	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.7	1	111.7	111.2	112.2	0								0	0	0	0.63775	1	48310	48310		0	0	1				38000	2610	18826	18904	44029	44029					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5056030154228	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.83	1	111.83	111.33	112.33	0								0	0	0	0.63775	1	48361	48361		0	0	1				38001	2610	18826	18904	44030	44030					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5092040896416	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.98	1	111.98	111.48	112.48	0								0	0	0	0.63775	1	48423	48423		0	0	1				38002	2610	18826	18904	44031	44031					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5046874880791	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.11	1	112.11	111.61	112.61	0								0	0	0	0.63775	1	48477	48477		0	0	1				38003	2610	18826	18904	44032	44032					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5076171755791	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.23	1	112.23	111.73	112.73	0								0	0	0	0.63775	1	48527	48527		0	0	1				38004	2610	18826	18904	44033	44033					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5076782107353	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.39	1	112.39	111.89	112.89	0								0	0	0	0.63775	1	48592	48592		0	0	1				38005	2610	18826	18904	44034	44034					0.2677958731569561
VKKRRKRRRKS	11	Unmodified	_VKKRRKRRRKS_					0	0	0		nc|ENSG00000134324|Q14693|LPIN1;nc|ENSG00000134324|Q14693-2|LPIN1;nc|ENSG00000134324|Q14693-4|LPIN1;ENSG00000134324|ENST00000674199|LPIN1;nc|ENSG00000134324|Q14693-5|LPIN1;nc|ENSG00000134324|Q14693-7|LPIN1;nc|ENSG00000134324|Q14693-6|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	nc|ENSG00000134324|Q14693|LPIN1	MSMS	GG20161007_CRH_Patient100_A02_01	1	749.5054809451103	2	749.505484	1496.99641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.59	1	112.59	112.09	113.09	0								0	0	0	0.63775	1	48673	48673		0	0	1				38006	2610	18826	18904	44035	44035					0.2677958731569561
VKKSKLHW	8	Unmodified	_VKKSKLHW_					0	0	0		ENSG00000128285|ENST00000249016|MCHR1	ENSG00000128285|ENST00000249016|MCHR1	ENSG00000128285|ENST00000249016|MCHR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	342.2123901247978	3	342.546671	1024.61818	0.83293	0.00028532	1.4033	0.00048069	2.2362	0.00076601	342.54655257694094	33.071	0.12019	33.365	33.305	33.425	0.29431					6	3	2	0	0	0	2.3239	1	13870	13870		0.45834	0.18932	1	114310			38007	2364	18827	18905	44036	44036					0.10686049676360199
VKKTLQLV	8	Unmodified	_VKKTLQLV_					0	0	0			REV__ENSG00000187097|ENST00000334696|ENTPD5	REV__ENSG00000187097|ENST00000334696|ENTPD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	928.6214477419853	1	928.618979	927.611703	1.1433	0.0010617	0.3651	0.00033904	1.5084	0.0014007	928.6192028705204	107.78	0.23578	107.78	107.62	107.86	0					47	12	5	0	0	0	0.89176	2	46227	46227;46301		0.79363	0	1	1584399999.9999998	+		38008	11526	18828	18906	44037;44038	44037					0.14500111724998987
VKKTLQLV	8	Unmodified	_VKKTLQLV_					0	0	0			REV__ENSG00000187097|ENST00000334696|ENTPD5	REV__ENSG00000187097|ENST00000334696|ENTPD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	928.618979	927.611703	1.1433	0.0010617	0.3651	0.00033904	1.5084	0.0014007	928.6192028705204	107.78	0.23578	107.78	107.62	107.86	0	0.0009154	0.00052628	NaN	0.79363	47	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1584399999.9999998	+		38009	11526	18828	18906							0.14500111724998987
VKKVIPLG	8	Unmodified	_VKKVIPLG_					0	0	0		tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2990905642509	2	427.297114	852.579674	3.1849	0.0013609	1.4768	0.00063101	4.6616	0.0019919	427.2981139537453	109.07	0.87873	109.22	108.99	109.87	0.15898					83	39	3	0	0	0	0.89176	1	47326	47326		0.79363	0	1	27378000			38010	16530	18829	18907	44039	44039					0.14748744041855844
VKKVIPLG	8	Unmodified	_VKKVIPLG_					0	0	0		tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	tr|A0A553SQU4|A0A553SQU4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07290PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.2995788455009	2	427.297114	852.579674	3.2673	0.0013961	0.54886	0.00023452	3.8161	0.0016306	427.2973511518065	109.14	0.69167	109.29	108.93	109.63	0.1548					50	32	3	0	0	0	0.89176	1	47244	47244		0.79363	0	1	17303000			38011	16530	18829	18907	44040	44040					0.14748744041855844
VKKVLGKRK	9	Unmodified	_VKKVLGKRK_					0	0	0			REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3774902224541	2	528.374218	1054.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.99	1	102.05	101.55	102.55	0.062805								0	0	0	0.42693	1	42701	42701		0	0	1		+		38012	9226	18830	18908	44041	44041					0.2087057352721331
VKKVLGKRK	9	Unmodified	_VKKVLGKRK_					0	0	0			REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3788329958916	2	528.374218	1054.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.8	1	101.97	101.47	102.47	0.17032								0	0	0	0.42693	1	42831	42831		0	0	1		+		38013	9226	18830	18908	44042	44042					0.2087057352721331
VKKVLGKRK	9	Unmodified	_VKKVLGKRK_					0	0	0			REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	REV__ENST00000493917.5_1_9:33248401-33256801:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3755981326103	2	528.374218	1054.73388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102	1	102.17	101.67	102.67	0.17032								0	0	0	0.42693	1	42921	42921		0	0	1		+		38014	9226	18830	18908	44043	44043					0.2087057352721331
VKKYHRKIRKM	11	Unmodified	_VKKYHRKIRKM_					0	0	0			REV__tr|A0A7D7A3V6|A0A7D7A3V6_9CLOTAPCfamilypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23060PE=4SV=1	REV__tr|A0A7D7A3V6|A0A7D7A3V6_9CLOTAPCfamilypermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_23060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	743.4637939333916	2	743.961197	1485.90784	1.9706	0.0014661	-0.72265	-0.00053763	1.248	0.00092845	743.9606790015104	85.504	0.30848	86.63	86.46	86.769	1.1265					21	12	2	0	0	0	0.14606	1	35889	35889		0.30703	0	1	5865900	+		38015	15868	18831	18909	44044	44044					0.18432410961008827
VKLAAARP	8	Unmodified	_VKLAAARP_					0	0	0			REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	REV__ENST00000318789.8_1_3:71006977-71007181:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2674743533134	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.5	1	109.66	109.16	110.16	0.15898								0	0	0	1.0178	1	47563	47563		0.69038	0	1		+		38016	12397	18832	18910	44045	44045					0.10394116205168302
VKLALLLLF	9	Unmodified	_VKLALLLLF_					0	0	0			REV__ENST00000567040.5_1_16:30087698-30094972:+|nuORF	REV__ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1029.707690417767	1	1029.70707	1028.69979	3.7428	0.003854	-1.6146	-0.0016626	2.1282	0.0021914	1029.7047568755338	108.12	0.10364	108.28	108.23	108.33	0.15796					25	12	3	0	0	0	0.85403	1	46594	46594		0	0	1	76307000	+		38017	10377	18833	18911	44046	44046					0.18658732315589077
VKLALLLLF	9	Unmodified	_VKLALLLLF_					0	0	0			REV__ENST00000567040.5_1_16:30087698-30094972:+|nuORF	REV__ENST00000567040.5_1_16:30087698-30094972:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3582031130791	2	515.357171	1028.69979	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.03	1	109.18	108.68	109.68	0.1548								0	0	0	0.42693	1	47196	47196		0	0	1		+		38018	10377	18833	18911	44047	44047					0.18658732315589077
VKLARHVLT	9	Unmodified	_VKLARHVLT_					0	0	0		nc|ENSG00000116141|Q9P0L2-3|MARK1;ENSG00000116141|ENST00000366917|MARK1	nc|ENSG00000116141|Q9P0L2-3|MARK1	nc|ENSG00000116141|Q9P0L2-3|MARK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2238952517509	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.15	1	101.15	100.65	101.65	0								0	0	0	0.42693	1	42345	42345		0.23584	0	1				38019	1953	18834	18912	44048	44048					0.13889721222108165
VKLARHVLT	9	Unmodified	_VKLARHVLT_					0	0	0		nc|ENSG00000116141|Q9P0L2-3|MARK1;ENSG00000116141|ENST00000366917|MARK1	nc|ENSG00000116141|Q9P0L2-3|MARK1	nc|ENSG00000116141|Q9P0L2-3|MARK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2234680056572	3	346.225709	1035.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.35	1	101.35	100.85	101.85	0								0	0	0	0.42693	1	42440	42440		0.23584	0	1				38020	1953	18834	18912	44049	44049					0.13889721222108165
VKLIKTVIKLL	11	Unmodified	_VKLIKTVIKLL_					0	0	0			REV__ENST00000539644.5_1_12:124499189-124499246:+|nuORF	REV__ENST00000539644.5_1_12:124499189-124499246:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.4565917849541	2	634.457416	1266.90028	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.99	1	110.14	109.64	110.64	0.15228								0	0	0	0.63775	1	47709	47709		0	0	1		+		38021	13775	18835	18913	44050	44050					0.2775058191239168
VKLLDDLLP	9	Unmodified	_VKLLDDLLP_					0	0	0			REV__ENST00000504674.1_1_5:39719945-39720791:-|nuORF	REV__ENST00000504674.1_1_5:39719945-39720791:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	341.9823791384697	3	342.546226	1024.61685	-0.2188	-7.495E-05	3.6151	0.0012383	3.3963	0.0011634	342.5473660595559	21.633	0.36357	22.81	22.628	22.991	1.177					26	11	3	0	0	0	0.11891	1	9112	9112		2.9952	0	1	1235400	+		38022	13526	18836	18914	44051	44051					0.10552370796949617
VKLLDDLLP	9	Unmodified	_VKLLDDLLP_					0	0	0			REV__ENST00000504674.1_1_5:39719945-39720791:-|nuORF	REV__ENST00000504674.1_1_5:39719945-39720791:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	342.546226	1024.61685	-0.024238	-8.3026E-06	2.6014	0.00089109	2.5771	0.00088279	342.54718391949535	21.251	0.35931	22.826	22.589	22.949	1.5748	0.0079318	-0.00051369	NaN	2.9952	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1100600	+		38023	13526	18836	18914							0.10552370796949617
VKLLPLGAT	9	Unmodified	_VKLLPLGAT_					0	0	0		ENST00000526234.1_1_19:17530944-17533268:+|nuORF;nc|ENSG00000141971|Q96EY5-2|MVB12A;nc|ENSG00000141971|Q96EY5-3|MVB12A;ENSG00000141971|ENST00000317040|MVB12A	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	911.5945922732353	1	911.59243	910.585153	1.1242	0.0010248	1.1822	0.0010777	2.3065	0.0021025	911.59326144358	107.78	0.17513	107.78	107.67	107.84	0					31	9	4	0	0	0	0.85019	1	46251	46251		0.52476	0	1	225150000			38024	2979	18837	18915	44052	44052					0.1262842283365444
VKLLPLGAT	9	Unmodified	_VKLLPLGAT_					0	0	0		ENST00000526234.1_1_19:17530944-17533268:+|nuORF;nc|ENSG00000141971|Q96EY5-2|MVB12A;nc|ENSG00000141971|Q96EY5-3|MVB12A;ENSG00000141971|ENST00000317040|MVB12A	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	911.5945922732353	1	911.59243	910.585153	2.8351	0.0025844	0.34365	0.00031326	3.1787	0.0028977	911.5924049610394	106.13	0.1606	106.29	106.21	106.37	0.15781					20	8	4	0	0	0	0.85019	1	45389	45389		0.52476	0	1	58238000			38025	2979	18837	18915	44053	44053					0.1262842283365444
VKLLPLGAT	9	Unmodified	_VKLLPLGAT_					0	0	0		ENST00000526234.1_1_19:17530944-17533268:+|nuORF;nc|ENSG00000141971|Q96EY5-2|MVB12A;nc|ENSG00000141971|Q96EY5-3|MVB12A;ENSG00000141971|ENST00000317040|MVB12A	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	911.59243	910.585153	1.1236	0.0010243	3.5301	0.0032181	4.6537	0.0042423	911.595385480617	106.2	0.11337	106.2	106.13	106.25	0	-0.045517	0.0028101	NaN	0.52476	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10369000			38026	2979	18837	18915							0.1262842283365444
VKLLPLGAT	9	Unmodified	_VKLLPLGAT_					0	0	0		ENST00000526234.1_1_19:17530944-17533268:+|nuORF;nc|ENSG00000141971|Q96EY5-2|MVB12A;nc|ENSG00000141971|Q96EY5-3|MVB12A;ENSG00000141971|ENST00000317040|MVB12A	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	ENST00000526234.1_1_19:17530944-17533268:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	911.59243	910.585153	2.8148	0.002566	-0.1055	-9.6173E-05	2.7093	0.0024698	911.5919565617718	106.16	0.10146	106.21	106.15	106.25	0.05455	-0.026196	-0.00050416	NaN	0.52476	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7619600			38027	2979	18837	18915							0.1262842283365444
VKLLPQRTIIL	11	Unmodified	_VKLLPQRTIIL_					0	0	0		nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4373657107353	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.32	1	108.47	107.97	108.97	0.15795								0	0	0	0.63775	1	46738	46738		0	0	1				38028	7929	18838	18916	44054	44054					0.21967936730197835
VKLLPQRTIIL	11	Unmodified	_VKLLPQRTIIL_					0	0	0		nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4369994997978	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.52	1	108.67	108.17	109.17	0.1548								0	0	0	0.63775	1	46865	46865		0	0	1				38029	7929	18838	18916	44055	44055					0.21967936730197835
VKLLPQRTIIL	11	Unmodified	_VKLLPQRTIIL_					0	0	0		nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	nc|ENSG00000173157|P59510-2|ADAMTS20	MSMS	GG20161007_CRH_Patient100_W632_02	4	647.4371215701103	2	647.434473	1292.85439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.61	1	108.77	108.27	109.27	0.1548								0	0	0	0.63775	1	46931	46931		0	0	1				38030	7929	18838	18916	44056	44056					0.21967936730197835
VKLLQKRI	8	Unmodified	_VKLLQKRI_					0	0	0		nc|ENSG00000186416|O15226|NKRF;nc|ENSG00000186416|O15226-2|NKRF;ENSG00000186416|ENST00000688521|NKRF	nc|ENSG00000186416|O15226|NKRF	nc|ENSG00000186416|O15226|NKRF	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3479492068291	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.265	1	93.433	92.933	93.933	0.16835								0	0	0	1.0178	1	39046	39046		0.69038	0	1				38031	4788	18839	18917	44057	44057					0.18231195744544948
VKLNKKKR	8	Unmodified	_VKLNKKKR_					0	0	0			REV__chr10:5773941-5783324|88|60.59|0.56|6.74|-|0|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|17	REV__chr10:5773941-5783324|88|60.59|0.56|6.74|-|0|TE_info:L1PBa,L1PBa_dup1536,L1,LINE,donor,-,5783324,5784958|GDI2,None|17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9012023806572	3	338.569588	1012.68693	-0.40742	-0.00013794	3.6925	0.0012502	3.285	0.0011122	338.90592155412037	52.785	0.095814	54.186	54.121	54.216	1.4005					4	2	2	0	0	0	2.3239	1	22072	22072		6.2058	2.6093	1	220930	+		38032	8233	18840	18918	44058	44058					0.18109713976070907
VKLSRLLPLRV	11	Unmodified	_VKLSRLLPLRV_					0	0	0		ENST00000238081.7_1_2:9770567-9771075:-|nuORF	ENST00000238081.7_1_2:9770567-9771075:-|nuORF	ENST00000238081.7_1_2:9770567-9771075:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	323.4724609255791	4	324.223683	1292.86563	-0.074699	-2.4219E-05	3.5081	0.0011374	3.4334	0.0011132	324.2248841150861	23.11	0.30634	24.761	24.624	24.93	1.6511					16	9	2	0	0	0	0.14606	1	9664	9664		2.2527	1.0379	1	1566200			38033	5559	18841	18919	44059	44059					0.2309075882428715
VKMDLWSLF	9	Unmodified	_VKMDLWSLF_					0	0	0		tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	tr|A0A553SFJ7|A0A553SFJ7_NIACISodium:protonantiporterOS=NialliacirculansOX=1397GN=CEQ21_08965PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8035766482353	2	569.801903	1137.58925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.146	1	57.555	57.055	58.055	1.4099								0	0	0	0.317	1	23529	23529		16.942	3.4344	1				38034	16060	18842	18920	44060	44060					0.025961442650668687
VKMKKCLK	8	Unmodified	_VKMKKCLK_					0	0	0			REV__nc|ENSG00000065485|Q14554-2|PDIA5	REV__nc|ENSG00000065485|Q14554-2|PDIA5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	977.6022216677666	1	977.59984	976.592564	2.8095	0.0027465	-0.29023	-0.00028372	2.5192	0.0024628	977.5992743235495	107.69	0.1835	107.74	107.62	107.8	0.052452					28	9	4	0	0	0	0.89198	1	46097	46097		0	0	1	207360000	+		38035	8674	18843	18921	44061	44061					0.10333115838068352
VKNALCHE	8	Unmodified	_VKNALCHE_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000024146	REV__CON__ENSEMBL:ENSBTAP00000024146	MSMS	GG20161007_CRH_Patient100_A02_02	2	305.1567565798759	3	305.156855	912.448736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.621	1	16.772	16.272	17.272	0.15093								0	0	0	1.0178	1	6897	6897		0.45834	0	1		+	+	38036	8373	18844	18922	44062	44062					-0.010990146685230684
VKNVPRATR	9	Unmodified	_VKNVPRATR_					0	0	0			REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	347.2198058962822	3	347.548964	1039.62506	-1.1612	-0.00040356	-0.8641	-0.00030032	-2.0253	-0.00070388	347.5487827225249	44.672	0.64603	44.672	44.287	44.933	0					38	20	2	0	0	0	0.11923	1	18692	18692		2.086	0.43339	1	2782200	+		38037	8856	18845	18923	44063	44063					0.10683362556937936
VKNVPRATR	9	Unmodified	_VKNVPRATR_					0	0	0			REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.5474426150322	3	347.548964	1039.62506	0.61578	0.00021402	-2.0184	-0.00070151	-1.4027	-0.00048749	347.54824695628696	42.24	0.75204	43.58	43.201	43.953	1.3399					44	23	3	0	0	0	0.78661	1	17679	17679		3.8763	0	1	3087400	+		38038	8856	18845	18923	44064	44064					0.10683362556937936
VKNVPRATR	9	Unmodified	_VKNVPRATR_					0	0	0			REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	REV__MAST2|p.G1204Afs*79|1|0.12|ENSG00000086015|chr1:46033873-46033873|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.5483276247978	3	347.548964	1039.62506	1.3457	0.0004677	-4.2595	-0.0014804	-2.9138	-0.0010127	347.5477493687869	41.69	0.62015	43.582	43.269	43.889	1.8927					36	19	2	0	0	0	0.78661	1	17444	17444		3.8763	0	1	2826600	+		38039	8856	18845	18923	44065	44065					0.10683362556937936
VKNVSGIG	8	Unmodified	_VKNVSGIG_					0	0	0		nc|ENSG00000168826|Q6ZSB9-4|ZBTB49;nc|ENSG00000168826|Q6ZSB9-3|ZBTB49;nc|ENSG00000168826|Q6ZSB9-5|ZBTB49;nc|ENSG00000168826|Q6ZSB9-2|ZBTB49;ENSG00000168826|ENST00000337872|ZBTB49	nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	773.5627929568291	1	773.451579	772.444303	1.3211	0.0010218	0.23512	0.00018185	1.5563	0.0012037	773.4522204553786	107.96	0.094437	107.96	107.89	107.99	0					14	4	4	0	0	0	2.3239	1	46385	46385		0	0	1	104210000			38040	4056	18846	18924	44066	44066					0.04897844180254651
VKNVSGIG	8	Unmodified	_VKNVSGIG_					0	0	0		nc|ENSG00000168826|Q6ZSB9-4|ZBTB49;nc|ENSG00000168826|Q6ZSB9-3|ZBTB49;nc|ENSG00000168826|Q6ZSB9-5|ZBTB49;nc|ENSG00000168826|Q6ZSB9-2|ZBTB49;ENSG00000168826|ENST00000337872|ZBTB49	nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	nc|ENSG00000168826|Q6ZSB9-4|ZBTB49	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	387.2843505740166	2	387.229428	772.444303	2.4784	0.00095971	1.818	0.00070399	4.2964	0.0016637	387.23050963511207	107.74	0.12793	107.9	107.83	107.95	0.15781					11	6	2	0	0	0	2.3239	1	46385	46385		0	0	1	52054000			38041	4056	18846	18924	44067	44067					0.04897844180254651
VKPALPLLI	9	Unmodified	_VKPALPLLI_					0	0	0			REV__ENST00000511909.5_1_4:122053805-122071269:-|nuORF	REV__ENST00000511909.5_1_4:122053805-122071269:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	321.8926879763603	3	321.891556	962.652839	0.117	3.766E-05	3.2069	0.0010323	3.3239	0.0010699	321.8924628035148	23.648	0.49806	23.887	23.665	24.163	0.23883					30	15	3	0	0	0	0.85403	1	9838	9838		0	0	1	914320	+		38042	13576	18847	18925	44068	44068					0.17001872764478776
VKPFVPRLH	9	Unmodified	_VKPFVPRLH_					0	0	0		ENST00000308982.11_1_3:128631530-128631665:+|nuORF	ENST00000308982.11_1_3:128631530-128631665:+|nuORF	ENST00000308982.11_1_3:128631530-128631665:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	364.1173889040947	3	364.894071	1091.66038	2.5014	0.00091274	2.6651	0.00097247	5.1665	0.0018852	364.894653007244	84.987	0.33809	86.583	86.341	86.68	1.5962					16	12	2	0	0	0	0.11954	1	35679	35679		0.26902	0	1	2930400			38043	5793	18848	18926	44069	44069					0.11822025084757115
VKPGRKKKKKK	11	Unmodified	_VKPGRKKKKKK_					0	0	0			REV__ENSG00000111142|ENST00000323666|METAP2	REV__ENSG00000111142|ENST00000323666|METAP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	442.3129760622978	3	442.313629	1323.91906	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.15	1	104.15	103.65	104.65	0								0	0	0	0.63775	1	43904	43904		0	0	1		+		38044	9316	18849	18927	44070	44070					0.27005556326798796
VKPIKQRP	8	Unmodified	_VKPIKQRP_					0	0	0			REV__PEAK1|p.N564Tfs*75|1|0.06|ENSG00000173517|chr15:77180241-77180241|C/-|frameshift_variant	REV__PEAK1|p.N564Tfs*75|1|0.06|ENSG00000173517|chr15:77180241-77180241|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	483.3168823122978	2	483.316369	964.618185	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.651	1	33.476	32.976	33.976	1.8246								0	0	0	1.0178	1	13269	13269		0.69038	0	1		+		38045	11101	18850	18928	44071	44071					0.13446049676360872
VKPKKLRRRR	10	Unmodified	_VKPKKLRRRR_					0	0	0			REV__ENST00000367265.7_1_1:202777435-202777672:-|nuORF	REV__ENST00000367265.7_1_1:202777435-202777672:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.9618408083916	2	668.959846	1335.90514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.87	1	53.87	53.37	54.37	0								0	0	0	0.6624	1	22458	22458		0.40072	0	1		+		38046	12623	18851	18929	44072	44072					0.2506232361838556
VKPKKLRRRR	10	Unmodified	_VKPKKLRRRR_					0	0	0			REV__ENST00000367265.7_1_1:202777435-202777672:-|nuORF	REV__ENST00000367265.7_1_1:202777435-202777672:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.9608642458916	2	668.959846	1335.90514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.21	1	55.21	54.71	55.71	0								0	0	0	0.6624	1	23000	23000		0.40072	0	1		+		38047	12623	18851	18929	44073	44073					0.2506232361838556
VKPKLAAP	8	Unmodified	_VKPKLAAP_					0	0	0			REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2749816775322	2	412.273638	822.532724	2.9212	0.0012044	0.2507	0.00010336	3.1719	0.0013077	412.27371234347015	106.18	0.19926	106.34	106.23	106.43	0.15781					33	10	5	0	0	0	0.89176	1	45396	45396		0.79363	0	1	345950000	+		38048	9824	18852	18930	44074	44074					0.1143588449069739
VKPKLAAP	8	Unmodified	_VKPKLAAP_					0	0	0			REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	412.273638	822.532724	2.9548	0.0012182	1.6576	0.00068338	4.6123	0.0019015	412.27448321916677	106.22	0.31258	106.28	106.04	106.35	0.05455	-0.034647	0.0011246	NaN	0.79363	27	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82214000	+		38049	9824	18852	18930							0.1143588449069739
VKPKLAAP	8	Unmodified	_VKPKLAAP_					0	0	0			REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	REV__MAP1B|p.C1613Mfs*15|1|0.05|ENSG00000131711|chr5:72198190-72198191|-/G|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	412.273638	822.532724	2.9212	0.0012044	0.2507	0.00010336	3.1719	0.0013077	412.27371234347015	106.18	0.19926	106.34	106.23	106.43	0.15781	0.030014	-3.5447E-05	NaN	0.79363	33	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	345950000	+		38050	9824	18852	18930							0.1143588449069739
VKPKLILAAPL	11	Unmodified	_VKPKLILAAPL_					0	0	0		tr|A0A7D7A0B9|A0A7D7A0B9_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_23460PE=4SV=1	tr|A0A7D7A0B9|A0A7D7A0B9_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_23460PE=4SV=1	tr|A0A7D7A0B9|A0A7D7A0B9_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_23460PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	388.2697631716728	3	388.268915	1161.78492	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.4	1	104.4	103.9	104.9	0								0	0	0	0.63775	1	44049	44049		0	0	1				38051	17222	18853	18931	44075	44075					0.2104947778143469
VKPKPAIA	8	Unmodified	_VKPKPAIA_					0	0	0			REV__FGD6|p.D656Vfs*16|1|0.1|ENSG00000180263|chr12:95209317-95209318|-/A|frameshift_variant	REV__FGD6|p.D656Vfs*16|1|0.1|ENSG00000180263|chr12:95209317-95209318|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.2747375369072	2	412.273638	822.532724	3.1791	0.0013107	-0.29915	-0.00012333	2.88	0.0011873	412.27350480358695	106.16	0.19696	106.32	106.2	106.4	0.16174					33	10	5	0	0	0	0.89176	1	45316	45316		0.79363	0	1	339400000	+		38052	11292	18854	18932	44076	44076					0.11435884490686021
VKPLGVILWGK	11	Unmodified	_VKPLGVILWGK_					0	0	0			REV__ENST00000399173.5_1_1:27952613-27952697:-|nuORF	REV__ENST00000399173.5_1_1:27952613-27952697:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	303.1988098025322	4	303.198405	1208.76451	0.10291	3.1202E-05	1.9365	0.00058714	2.0394	0.00061834	303.1990037599394	29.36	1.4235	31.159	30.267	31.69	1.7987					123	46	4	0	0	0	1.0362	1	12282	12282		1.3296	0.36737	1	13215000	+		38053	12875	18855	18933	44077	44077					0.16848307121586004
VKPLRKPRIP	10	Unmodified	_VKPLRKPRIP_					0	0	0		nc|ENSG00000137648|Q9NRS4-2|TMPRSS4;nc|ENSG00000137648|Q9NRS4-3|TMPRSS4;ENSG00000137648|ENST00000437212|TMPRSS4	nc|ENSG00000137648|Q9NRS4-2|TMPRSS4	nc|ENSG00000137648|Q9NRS4-2|TMPRSS4	MSMS	GG20161007_CRH_Patient100_W632_01	3	602.4081298708916	2	602.40605	1202.79755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.52	1	105.68	105.18	106.18	0.15859								0	0	0	0.66176	1	44961	44961		1.4819	0	1				38054	2780	18856	18934	44078	44078					0.20425933964293108
VKPQGLVVTS	10	Unmodified	_VKPQGLVVTS_					0	0	0		ENSG00000126705|ENST00000673934|AHDC1;AHDC1|p.M539Sfs*46|1|0.61|ENSG00000126705|chr1:27550500-27550500|A/-|frameshift_variant	ENSG00000126705|ENST00000673934|AHDC1	ENSG00000126705|ENST00000673934|AHDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2114135622978	3	343.209725	1026.60735	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.08	1	106.14	105.64	106.64	0.05455								0	0	0	0.66227	1	45126	45126		0.62683	0.22611	1				38055	2311	18857	18935	44079	44079					0.09510602511431898
VKPRRKHK	8	Unmodified	_VKPRRKHK_					0	0	0			REV__ENSG00000114857|ENST00000232978|NKTR	REV__ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2334472537041	3	350.233198	1047.67777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.063	1	41.38	40.88	41.88	0.31683								0	0	0	1.0178	1	17255	17255		0.40072	0	1		+		38056	9420	18858	18936	44080	44080					0.15583365410407168
VKPRRKHK	8	Unmodified	_VKPRRKHK_					0	0	0			REV__ENSG00000114857|ENST00000232978|NKTR	REV__ENSG00000114857|ENST00000232978|NKTR	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2182494997978	3	350.233198	1047.67777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.62	1	67.943	67.443	68.443	0.32269								0	0	0	1.0178	1	28311	28311		0.40072	0	1		+		38057	9420	18858	18936	44081	44081					0.15583365410407168
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	318.2275268435478	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.844	1	93.844	93.344	94.344	0								0	0	0	1.0178	1	39218	39218		0	0	1				38058	6919	18859	18937	44082	44082					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.2278625369072	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.982	1	83.252	82.752	83.752	0.27029								0	0	0	1.0178	1	34704	34704		0	0	1				38059	6919	18859	18937	44083	44083					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.2286559939384	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.921	1	91.13	90.63	91.63	0.20904								0	0	0	1.0178	1	38093	38093		0	0	1				38060	6919	18859	18937	44084	44084					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.2276489138603	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.144	1	91.334	90.834	91.834	0.19042								0	0	0	1.0178	1	38182	38182		0	0	1				38061	6919	18859	18937	44085	44085					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.2285339236259	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.46	1	103.51	103.01	104.01	0.059502								0	0	0	1.0178	1	43395	43395		0	0	1				38062	6919	18859	18937	44086	44086					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.2283203005791	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.57	1	103.63	103.13	104.13	0.059502								0	0	0	1.0178	1	43470	43470		0	0	1				38063	6919	18859	18937	44087	44087					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.2282897830009	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.326	1	91.307	90.807	91.807	0.98157								0	0	0	1.0178	1	38058	38058		0	0	1				38064	6919	18859	18937	44088	44088					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.2299987673759	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.541	1	91.523	91.023	92.023	0.98157								0	0	0	1.0178	1	38145	38145		0	0	1				38065	6919	18859	18937	44089	44089					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.2277099490166	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.132	1	23.747	23.247	24.247	1.6158								0	0	0	1.0178	1	9232	9232		0	0	1				38066	6919	18859	18937	44090	44090					0.18155810715859388
VKPVIRKI	8	Unmodified	_VKPVIRKI_					0	0	0		ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	ENST00000492084.5_1_6:31670780-31670846:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.2272521853447	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.428	1	36.25	35.75	36.75	1.8227								0	0	0	1.0178	1	14435	14435		0	0	1				38067	6919	18859	18937	44091	44091					0.18155810715859388
VKQLVLQPV	9	Unmodified	_VKQLVLQPV_					0	0	0		ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	ENSG00000100888|ENST00000646647|CHD8	MSMS	GG20161007_CRH_Patient100_W632_01	3	341.8890869021416	3	341.890215	1022.64882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.087	1	37.363	36.863	37.863	1.2762								0	0	0	0.42693	1	15150	15150		1.1933	0	1				38068	1308	18860	18938	44092	44092					0.13839783270748285
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5448791384697	3	408.54489	1222.61284	-0.74917	-0.00030607	-1.3877	-0.00056692	-2.1368	-0.00087299	408.54460807250786	13.624	0.43168	13.624	13.456	13.887	0					66	13	6	0	0	0	0.17708	4	5606	5606;5648;5687;5726		28.181	6.5911	1	70435000	+		38069	10179	18861	18939	44093;44094;44095;44096	44093					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	408.5441467165947	3	408.54489	1222.61284	-0.72954	-0.00029805	-0.82413	-0.00033669	-1.5537	-0.00063474	408.5446707320336	14.024	1.3925	14.024	13.887	15.28	0					98	44	4	0	0	0	0.17708	2	5818	5770;5818		28.181	7.6261	1	17343000	+		38070	10179	18861	18939	44097;44098	44098					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5444213747978	3	408.54489	1222.61284	0.42548	0.00017383	-2.3051	-0.00094173	-1.8796	-0.0007679	408.54410820128203	13.848	1.1511	13.947	13.78	14.931	0.099441					68	36	4	0	0	0	0.50855	1	5767	5767		14.838	0	1	3050000	+		38071	10179	18861	18939	44099	44099					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5440551638603	3	408.54489	1222.61284	-0.41577	-0.00016986	-1.6205	-0.00066205	-2.0363	-0.00083192	408.54427750083966	12.999	0.56661	13.725	13.473	14.04	0.72639					54	17	4	0	0	0	0.1347	1	5394	5394		33.821	6.5981	1	8421300	+		38072	10179	18861	18939	44100	44100					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5433532595634	3	408.54489	1222.61284	-0.3541	-0.00014466	-2.144	-0.00087592	-2.4981	-0.0010206	408.5441329084293	13.464	0.46385	14.19	14.008	14.472	0.72639					32	14	3	0	0	0	0.50855	1	5589	5589		14.838	0.61973	1	1858000	+		38073	10179	18861	18939	44101	44101					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5441467165947	3	408.54489	1222.61284	0.032474	1.3267E-05	-1.8383	-0.00075103	-1.8058	-0.00073776	408.5441732319128	12.746	0.55992	13.533	13.303	13.863	0.78751					51	18	4	0	0	0	0.17708	1	5280	5280		28.181	7.6003	1	3462600	+		38074	10179	18861	18939	44102	44102					0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	408.54489	1222.61284	-0.74917	-0.00030607	-1.3877	-0.00056692	-2.1368	-0.00087299	408.54460807250786	13.624	0.43168	13.624	13.456	13.887	0	0.032966	0.00054727	NaN	33.821	66	13	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70435000	+		38075	10179	18861	18939							0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	408.54489	1222.61284	-0.3541	-0.00014466	-2.144	-0.00087592	-2.4981	-0.0010206	408.5441329084293	13.464	0.46385	14.19	14.008	14.472	0.72639	0.12906	-0.00067138	NaN	28.181	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1858000	+		38076	10179	18861	18939							0.01043958031573311
VKQPHVQACVD	11	Unmodified	_VKQPHVQACVD_					0	0	0			REV__nc|ENSG00000142515|P07288-3|KLK3	REV__nc|ENSG00000142515|P07288-3|KLK3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	408.54489	1222.61284	0.052114	2.1291E-05	-2.1993	-0.00089852	-2.1472	-0.00087723	408.54407963870585	13.254	0.43885	14.082	13.903	14.342	0.82789	0.021106	-0.00073919	NaN	28.181	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1252100	+		38077	10179	18861	18939							0.01043958031573311
VKRALLLLVPA	11	Unmodified	_VKRALLLLVPA_					0	0	0		ENST00000514031.5_1_4:2932567-2933551:-|nuORF;ENSG00000109736|ENST00000355443|MFSD10	ENST00000514031.5_1_4:2932567-2933551:-|nuORF	ENST00000514031.5_1_4:2932567-2933551:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2755920290947	3	398.276181	1191.80671	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.06	1	108.11	107.61	108.61	0.050644								0	0	0	0.63775	1	46381	46381		0.094841	0	1				38078	1675	18862	18940	44103	44103					0.21848282529981589
VKRGLFKVR	9	Unmodified	_VKRGLFKVR_					0	0	0		ENST00000487455.1_1_7:150065323-150066789:+|nuORF;ENST00000519397.1_1_7:150065323-150068442:+|nuORF	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	ENST00000487455.1_1_7:150065323-150066789:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	368.2443115115166	3	368.245104	1101.71348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.6	1	103.66	103.16	104.16	0.059502								0	0	0	0.42693	1	43494	43494		0.26902	0	1				38079	6879	18863	18941	44104	44104					0.166694028674101
VKRGLGAG	8	Unmodified	_VKRGLGAG_					0	0	0		ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.2409545779228	2	379.237587	756.460622	2.3381	0.00088669	2.7955	0.0010602	5.1336	0.0019468	379.23878254818743	107.89	0.10125	108.05	107.97	108.07	0.15781					10	6	2	0	0	0	0.89176	1	46537	46537		0.79363	0	1	42563000			38080	7303	18864	18942	44105	44105					0.07264970136998272
VKRGLGAG	8	Unmodified	_VKRGLGAG_					0	0	0		ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	379.237587	756.460622	2.6547	0.0010068	6.0937	0.002311	8.7484	0.0033177	379.2404651245639	107.94	0.13174	107.99	107.91	108.04	0.050644	-0.034063	0.0015013	NaN	0.79363	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17558000			38081	7303	18864	18942							0.07264970136998272
VKRGLGAG	8	Unmodified	_VKRGLGAG_					0	0	0		ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	ENST00000556095.5_1_14:96830043-96830214:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	379.237587	756.460622	2.9705	0.0011265	5.177	0.0019633	8.1475	0.0030898	379.24020519252576	107.88	0.14007	108.04	107.94	108.08	0.15795	0.0099433	0.000806	NaN	0.79363	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31082000			38082	7303	18864	18942							0.07264970136998272
VKRIFTHRVKR	11	Unmodified	_VKRIFTHRVKR_					0	0	0			REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.6419555544853	3	480.640516	1438.89972	3.2557	0.0015648	-0.18267	-8.7797E-05	3.0731	0.001477	480.6403982769973	105.77	0.12697	105.93	105.87	106	0.1586					23	6	5	0	0	0	1.0402	1	45136	45136		0.094841	0	1	57485000	+		38083	9962	18865	18943	44106	44106					0.197826000358873
VKRIFTHRVKR	11	Unmodified	_VKRIFTHRVKR_					0	0	0			REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	480.640516	1438.89972	1.4625	0.00070293	1.2199	0.00058633	2.6824	0.0012893	480.64140130111144	105.85	0.098854	105.85	105.79	105.89	0	-0.040442	0.0021015	NaN	0.094841	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14018000	+		38084	9962	18865	18943							0.197826000358873
VKRIFTHRVKR	11	Unmodified	_VKRIFTHRVKR_					0	0	0			REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	480.640516	1438.89972	3.5581	0.0017102	-0.84939	-0.00040825	2.7087	0.0013019	480.64032280137815	105.81	0.15794	105.87	105.74	105.9	0.05455	-0.029717	-0.0008822	NaN	0.094841	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11936000	+		38085	9962	18865	18943							0.197826000358873
VKRIFTHRVKR	11	Unmodified	_VKRIFTHRVKR_					0	0	0			REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	480.640516	1438.89972	3.2557	0.0015648	-0.18267	-8.7797E-05	3.0731	0.001477	480.6403982769973	105.77	0.12697	105.93	105.87	106	0.1586	0.037599	7.917E-05	NaN	0.094841	23	6	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57485000	+		38086	9962	18865	18943							0.197826000358873
VKRIFTHRVKR	11	Unmodified	_VKRIFTHRVKR_					0	0	0			REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	REV__ENST00000466012.5_1_2:219142848-219157252:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	480.640516	1438.89972	3.1445	0.0015114	-1.1053	-0.00053125	2.0392	0.00098013	480.64000083013167	105.76	0.15118	105.93	105.85	106	0.16679	0.032559	-0.0012512	NaN	0.094841	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70704000	+		38087	9962	18865	18943							0.197826000358873
VKRKHRVI	8	Unmodified	_VKRKHRVI_					0	0	0		tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.9001647830009	3	345.901449	1034.68252	1.1525	0.00039864	-3.4115	-0.00118	-2.259	-0.0007814	345.9000806206738	44.317	0.51118	45.682	45.482	45.993	1.3653					41	15	4	0	0	0	0.89187	1	18573	18573		0.40072	0	1	3454100			38088	17082	18866	18944	44107	44107					0.1665624955317071
VKRKHRVI	8	Unmodified	_VKRKHRVI_					0	0	0		tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.9015075564384	3	345.901449	1034.68252	1.0705	0.00037028	-2.5016	-0.0008653	-1.4311	-0.00049501	345.9004787642665	46.334	0.31528	48.304	48.126	48.441	1.9703					20	9	3	0	0	0	0.89187	1	19404	19404		0.40072	0	1	1510500			38089	17082	18866	18944	44108	44108					0.1665624955317071
VKRKHRVI	8	Unmodified	_VKRKHRVI_					0	0	0		tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	345.901449	1034.68252	0.7215	0.00024957	-3.0057	-0.0010397	-2.2842	-0.00079012	345.89988347608323	46.81	0.28695	48.192	48.027	48.314	1.3825	-0.056014	-0.00036114	NaN	0.40072	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1622800			38090	17082	18866	18944							0.1665624955317071
VKRKHRVI	8	Unmodified	_VKRKHRVI_					0	0	0		tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	tr|A0A7D6ZH71|A0A7D6ZH71_9CLOTtRNA1(Val)(Adenine(37)-N6)-methyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01800PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	345.901449	1034.68252	1.6667	0.00057651	-4.1125	-0.0014225	-2.4458	-0.000846	345.899664357188	43.618	0.43542	45.562	45.427	45.862	1.9438	-0.05997	-0.00033981	NaN	0.40072	37	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3004000			38091	17082	18866	18944							0.1665624955317071
VKRKVRVGHKR	11	Unmodified	_VKRKVRVGHKR_					0	0	0			REV__nc|ENSG00000160746|Q9NW15-2|ANO10	REV__nc|ENSG00000160746|Q9NW15-2|ANO10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.4776183962822	4	341.478378	1361.8844	-2.0537	-0.0007013	-0.3561	-0.0001216	-2.4098	-0.0008229	341.4780828238355	27.659	1.2612	27.659	26.716	27.978	0					127	41	6	0	0	0	1.0365	3	11434	11434;11484;11663		1.2148	0.76031	1	29982000	+		38092	10609	18867	18945	44109;44110;44111	44109					0.2179373323872369
VKRKVRVGHKR	11	Unmodified	_VKRKVRVGHKR_					0	0	0			REV__nc|ENSG00000160746|Q9NW15-2|ANO10	REV__nc|ENSG00000160746|Q9NW15-2|ANO10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.9680969119072	3	454.968745	1361.8844	1.499	0.00068198	-3.8614	-0.0017568	-2.3625	-0.0010748	454.9666374564642	26.158	0.48095	26.42	26.054	26.535	0.26173					20	15	2	0	0	0	1.0388	1	10841	10841		0.50596	0.34663	1	740680	+		38093	10609	18867	18945	44112	44112					0.2179373323872369
VKRKVRVGHKR	11	Unmodified	_VKRKVRVGHKR_					0	0	0			REV__nc|ENSG00000160746|Q9NW15-2|ANO10	REV__nc|ENSG00000160746|Q9NW15-2|ANO10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	454.968745	1361.8844	1.499	0.00068198	-3.8614	-0.0017568	-2.3625	-0.0010748	454.9666374564642	26.158	0.48095	26.42	26.054	26.535	0.26173	0	0	NaN	0.50596	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	740680	+		38094	10609	18867	18945							0.2179373323872369
VKRNQLFP	8	Unmodified	_VKRNQLFP_					0	0	0			REV__ENSG00000126870|ENST00000407559|DYNC2I1	REV__ENSG00000126870|ENST00000407559|DYNC2I1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2967101931572	2	501.298176	1000.5818	1.6541	0.00082918	-2.9549	-0.0014813	-1.3009	-0.00065213	501.29655735325906	72.636	0.2533	72.636	72.557	72.81	0					12	7	2	0	0	0	0.88587	1	30240	30240		5.2307	0	1	743810	+		38095	9705	18868	18946	44113	44113					0.08153172779657325
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4802123904228	4	334.48032	1333.89217	-2.5047	-0.00083777	-0.06068	-2.0296E-05	-2.5654	-0.00085806	334.48099796825176	22.889	1.7691	22.889	22.722	24.491	0					329	57	6	0	0	0	1.0191	11	9741	9483;9585;9624;9663;9741;9780;9819;9858;9936;10014;10131		2.6312	2.1767	1	206940000	+		38096	10787	18869	18947	44114;44115;44116;44117;44118;44119;44120;44121;44122;44123;44124	44118					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4799987673759	4	334.48032	1333.89217	-2.4259	-0.00081142	0.091848	3.0721E-05	-2.3341	-0.0007807	334.48107277347134	24.719	1.9579	24.719	24.367	26.325	0					284	63	6	0	0	0	1.0365	8	10287	10287;10365;10443;10482;10521;10677;10716;10794		1.2148	1.0555	1	149700000	+		38097	10787	18869	18947	44125;44126;44127;44128;44129;44130;44131;44132	44125					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4800598025322	4	334.48032	1333.89217	-2.3632	-0.00079045	-0.51662	-0.0001728	-2.8798	-0.00096325	334.48073959403655	26.214	1.7252	26.214	25.534	27.259	0					255	56	6	0	0	0	1.0191	7	10833	10833;10872;11002;11054;11093;11133;11275		2.6312	2.1767	1	123080000	+		38098	10787	18869	18947	44133;44134;44135;44136;44137;44138;44139	44133					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4791442751884	4	334.48032	1333.89217	-2.3175	-0.00077517	-0.51747	-0.00017308	-2.835	-0.00094825	334.4807408906752	27.546	2.2533	27.546	27.231	29.484	0					249	73	6	0	0	0	1.039	7	11393	11393;11444;11483;11600;11640;11747;11991		0.45452	0.32491	1	182450000	+		38099	10787	18869	18947	44140;44141;44142;44143;44144;44145;44146	44140					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4787780642509	4	334.48032	1333.89217	0.15656	5.2368E-05	-3.963	-0.0013255	-3.8064	-0.0012732	334.48033157320106	22.286	1.7562	22.509	22.173	23.929	0.223					274	57	7	0	0	0	1.039	9	9181	9181;9231;9272;9415;9470;9523;9575;9680;9733		0.45452	0	1	820460000	+		38100	10787	18869	18947	44147;44148;44149;44150;44151;44152;44153;44154;44155	44147					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	334.4797851443291	4	334.48032	1333.89217	0.25986	8.6918E-05	-3.3921	-0.0011346	-3.1323	-0.0010477	334.48065055399775	24.275	2.0568	24.517	23.73	25.787	0.24251					327	66	7	0	0	0	1.0191	5	10284	10048;10284;10456;10508;10562		2.6312	2.1767	1	444280000	+		38101	10787	18869	18947	44156;44157;44158;44159;44160	44157					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4802429080009	4	334.48032	1333.89217	-0.2731	-9.1347E-05	-3.6971	-0.0012366	-3.9702	-0.001328	334.4804280186109	21.223	1.6253	22.349	21.926	23.551	1.1254					249	50	7	0	0	0	1.0224	8	8899	8750;8899;8938;9016;9071;9125;9176;9229		2.4348	1.9803	1	740700000	+		38102	10787	18869	18947	44161;44162;44163;44164;44165;44166;44167;44168	44162					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.4786559939384	4	334.48032	1333.89217	-0.046462	-1.5541E-05	-3.1589	-0.0010566	-3.2053	-0.0010721	334.48064893038537	22.694	1.8804	23.908	23.609	25.489	1.2145					295	60	7	0	0	0	1.039	6	9940	9421;9613;9808;9848;9889;9940		0.45452	0.24894	1	642000000	+		38103	10787	18869	18947	44169;44170;44171;44172;44173;44174	44174					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MSMS	GG20161007_CRH_Patient100_W632_01	3	667.9504882693291	2	667.953364	1333.89217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.193	1	22.318	21.818	22.818	1.1254								0	0	0	0.63775	1	8846	8846		0.30703	0	1		+		38104	10787	18869	18947	44175	44175					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4786559939384	4	334.48032	1333.89217	-0.090081	-3.013E-05	-3.8923	-0.0013019	-3.9823	-0.001332	334.4803209183116	20.821	1.5995	22.395	21.969	23.569	1.5748					258	53	7	0	0	0	1.0365	12	8959	8520;8568;8620;8737;8774;8853;8906;8959;9010;9063;9110;9164		1.2148	0.76031	1	806570000	+		38105	10787	18869	18947	44176;44177;44178;44179;44180;44181;44182;44183;44184;44185;44186;44187	44183					0.23858447715633702
VKRQPKLLKPK	11	Unmodified	_VKRQPKLLKPK_					0	0	0			REV__ENSG00000165633|ENST00000332853|VSTM4	REV__ENSG00000165633|ENST00000332853|VSTM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4789306521416	4	334.48032	1333.89217	-0.021052	-7.0415E-06	-3.4115	-0.0011411	-3.4326	-0.0011481	334.48055263633654	22.564	1.9819	24.214	23.552	25.533	1.6498					317	64	7	0	0	0	1.0365	10	9638	9290;9379;9520;9559;9598;9638;9677;9770;9822;9958		1.2148	0.76031	1	559120000	+		38106	10787	18869	18947	44188;44189;44190;44191;44192;44193;44194;44195;44196;44197	44193					0.23858447715633702
VKRRKIHL	8	Unmodified	_VKRRKIHL_					0	0	0			REV__nc|ENSG00000109670|Q969H0-4|FBXW7	REV__nc|ENSG00000109670|Q969H0-4|FBXW7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.5712463259697	3	350.573332	1048.69817	-0.051003	-1.788E-05	-1.494	-0.00052375	-1.545	-0.00054163	350.5711047068008	22.821	0.8298	24.035	23.705	24.535	1.2145					57	26	4	0	0	0	0.89187	1	9596	9596		0.40072	0	1	934020	+		38107	9277	18870	18948	44198	44198					0.17576536070214388
VKRRKIHL	8	Unmodified	_VKRRKIHL_					0	0	0			REV__nc|ENSG00000109670|Q969H0-4|FBXW7	REV__nc|ENSG00000109670|Q969H0-4|FBXW7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	350.5712463259697	3	350.573332	1048.69817	-0.051003	-1.788E-05	-1.494	-0.00052375	-1.545	-0.00054163	350.5711047068008	22.821	0.8298	24.035	23.705	24.535	1.2145					57	26	4	0	0	0	2.3239	1	9596	9596		0.40072	0	1	934020	+		38108	9277	18870	18948	44199	44199					0.17576536070214388
VKRRMGPRIV	10	Unmodified	_VKRRMGPRIV_					0	0	0			REV__nc|ENSG00000132002|P25685-2|DNAJB1	REV__nc|ENSG00000132002|P25685-2|DNAJB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.6937744021416	4	303.693393	1210.74446	-2.8882	-0.00087712	3.0227	0.00091798	0.13454	4.0858E-05	303.69440317953496	26.74	1.5721	26.74	25.748	27.321	0					119	51	3	0	0	0	0.88031	1	11197	11197		3.5871	0.85186	1	5068100	+		38109	9835	18871	18949	44200	44200					0.14752232909995655
VKRSRKRRK	9	Unmodified	_VKRSRKRRK_					0	0	0			REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	405.2746765017509	3	405.274057	1212.80034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.92	1	31.21	30.71	31.71	0.29086								0	0	0	0.42693	1	12972	12972		0.26902	0	1		+		38110	13273	18872	18950	44201	44201					0.20245202141813934
VKRSRKRRK	9	Unmodified	_VKRSRKRRK_					0	0	0			REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	REV__ENST00000469758.5_1_10:120085736-120095927:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	405.2740661501884	3	405.274057	1212.80034	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.86	1	31.143	30.643	31.643	1.2825								0	0	0	0.42693	1	12529	12529		0.26902	0	1		+		38111	13273	18872	18950	44202	44202					0.20245202141813934
VKRVKKKKK	9	Unmodified	_VKRVKKKKK_					0	0	0			REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.2799560427666	3	381.280037	1140.81828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.12	1	109.27	108.77	109.77	0.1548								0	0	0	0.42693	1	47250	47250		0	0	1		+		38112	13100	18873	18951	44203	44203					0.2535052434395766
VKRVKKKKK	9	Unmodified	_VKRVKKKKK_					0	0	0			REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	REV__ENST00000444188.1_1_6:169613405-169614351:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	381.2806274294853	3	381.280037	1140.81828	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.11	1	113.26	112.76	113.76	0.14912								0	0	0	0.42693	1	48980	48980		0	0	1		+		38113	13100	18873	18951	44204	44204					0.2535052434395766
VKRVRLVI	8	Unmodified	_VKRVRLVI_					0	0	0			REV__nc|ENSG00000164049|Q6X9E4-2|FBXW12	REV__nc|ENSG00000164049|Q6X9E4-2|FBXW12	MSMS	GG20161007_CRH_Patient100_W632_01	3	328.2325622439384	3	328.234316	981.681119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.63	1	37.907	37.407	38.407	1.2762								0	0	0	1.0178	1	15376	15376		0	0	1		+		38114	10712	18874	18952	44205	44205					0.1895461546439492
VKSKKAIK	8	Unmodified	_VKSKKAIK_					0	0	0		nc|ENSG00000077327|O75602-4|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6;ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6;nc|ENSG00000077327|O75602-2|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.3137695193291	2	451.313295	900.612037	3.3065	0.0014923	-1.4693	-0.00066312	1.8372	0.00082917	451.31247810134533	107.76	0.23506	107.81	107.71	107.95	0.052444					42	12	5	0	0	0	0.89198	1	46221	46221		0	0	1	506480000			38115	961	18875	18953	44206	44206					0.15775531444830904
VKSKKAIK	8	Unmodified	_VKSKKAIK_					0	0	0		nc|ENSG00000077327|O75602-4|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6;ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6;nc|ENSG00000077327|O75602-2|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.3130065798759	2	451.313295	900.612037	3.43	0.001548	-2.145	-0.00096809	1.2849	0.0005799	451.3120645621807	107.73	0.20406	107.89	107.77	107.98	0.15795					30	10	4	0	0	0	0.89198	1	46383	46383		0	0	1	359110000			38116	961	18875	18953	44207	44207					0.15775531444830904
VKSKLTREIRN	11	Unmodified	_VKSKLTREIRN_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4120971560478	2	672.409518	1342.80448	2.5354	0.0017048	-0.91797	-0.00061725	1.6174	0.0010876	672.4088403979092	83.537	2.3909	83.537	82.677	85.068	0					147	76	2	0	0	0	1.0391	1	35056	35056		1.1933	0	1	4004900	+		38117	11577	18876	18954	44208	44208					0.14679202054207963
VKSKPKPPLV	10	Unmodified	_VKSKPKPPLV_					0	0	0			REV__nc|ENSG00000164542|Q8NCT3-4|MATCAP2	REV__nc|ENSG00000164542|Q8NCT3-4|MATCAP2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	364.2332946658134	3	364.909498	1091.70667	-0.88551	-0.00032313	-4.3607	-0.0015913	-5.2462	-0.0019144	365.2413389278428	67.943	0.22458	67.943	67.819	68.044	0					10	6	2	0	0	0	0.12559	1	28284	28284		0.77653	0.63664	1	478060	+		38118	10740	18877	18955	44209	44209					0.16448045196170824
VKSLQAFLH	9	Unmodified	_VKSLQAFLH_					0	0	0			REV__nc|ENSG00000125107|A5YKK6-4|CNOT1	REV__nc|ENSG00000125107|A5YKK6-4|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2064391970634	3	348.206315	1041.59712	0.39261	0.00013671	0.52159	0.00018162	0.9142	0.00031833	348.20622737833367	30.824	0.90298	32.639	32.358	33.261	1.8151					69	30	3	0	0	0	0.80869	1	12852	12852		2.9952	0	1	8107700	+		38119	9659	18878	18956	44210	44210					0.0779803957684635
VKSLTKLAL	9	Unmodified	_VKSLTKLAL_					0	0	0			REV__ENSG00000136813|ENST00000684092|ECPAS	REV__ENSG00000136813|ENST00000684092|ECPAS	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.8271667361259	2	486.826235	971.637917	3.4896	0.0016989	-1.2592	-0.00061299	2.2305	0.0010859	486.8256482782197	107.69	0.27667	107.74	107.6	107.88	0.052452					55	14	6	0	0	0	0.85403	1	46152	46152		0	0	1	1003499999.9999999	+		38120	9993	18879	18957	44211	44211					0.15096380896443407
VKTLELPL	8	Unmodified	_VKTLELPL_					0	0	0			REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5369445681572	3	304.863666	911.569169	0.19495	5.9432E-05	3.538	0.0010786	3.7329	0.001138	304.8645444166376	25.703	0.39911	25.955	25.645	26.044	0.25197					34	12	4	0	0	0	2.3239	1	10754	10754		0	0	1	1513700	+		38121	13262	18880	18958	44212	44212					0.10984716596760791
VKTLELPL	8	Unmodified	_VKTLELPL_					0	0	0			REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.8645202517509	3	304.863666	911.569169	-0.039717	-1.2108E-05	2.9749	0.00090695	2.9352	0.00089484	304.86457524496296	25.645	0.43353	27.362	27.089	27.523	1.7167					26	13	3	0	0	0	0.89176	1	10763	10763		0.45834	0	1	2269500	+		38122	13262	18880	18958	44213	44213					0.10984716596760791
VKTLELPL	8	Unmodified	_VKTLELPL_					0	0	0			REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.863666	911.569169	0.28269	8.6181E-05	5.2415	0.001598	5.5242	0.0016841	304.865465923746	27.285	0.68326	27.556	26.995	27.679	0.27119	0.11152	0.00083756	NaN	0.45834	43	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2059900	+		38123	13262	18880	18958							0.10984716596760791
VKTLELPL	8	Unmodified	_VKTLELPL_					0	0	0			REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	REV__ENST00000468862.5_1_3:159706816-159710915:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	304.863666	911.569169	-0.012236	-3.7305E-06	4.5499	0.0013871	4.5377	0.0013834	304.8651738768426	26.145	0.68523	27.416	26.844	27.529	1.271	-0.028514	0.00020503	NaN	0.45834	37	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2104200	+		38124	13262	18880	18958							0.10984716596760791
VKTQKVLP	8	Unmodified	_VKTQKVLP_					0	0	0			REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	REV__nc|ENSG00000161681|Q9Y566-2|SHANK1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8649474978447	3	304.867411	911.580402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.467	1	23.467	22.967	23.967	0								0	0	0	1.0178	1	9783	9783		3.5965	0	1		+		38125	10624	18881	18959	44214	44214					0.12107538690884212
VKTTAKLIV	9	Unmodified	_VKTTAKLIV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;TTN|p.T6904Lfs*6|1|0.08|ENSG00000155657|chr2:178723439-178723439|T/-|frameshift_variant;TTN|p.V5150Afs*3|1|0.06|ENSG00000155657|chr2:178732661-178732661|A/-|frameshift_variant;TTN|p.R4157*|1|0.07|ENSG00000155657|chr2:178739814-178739815|-/C|frameshift_variant;TTN|p.L3483Ifs*33|1|0.11|ENSG00000155657|chr2:178741835-178741836|-/AT|frameshift_variant;nc|ENSG00000155657|Q8WZ42-6|TTN;TTN|p.E3802Dfs*59|1|0.05|ENSG00000155657|chr2:178740876-178740877|-/GAAGTAACAAGGTACATGCACATGATGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.6467773318291	1	972.645194	971.637917	1.1913	0.0011587	0.45461	0.00044217	1.6459	0.0016009	972.6455730656805	107.69	0.22084	107.69	107.58	107.81	0					41	11	5	0	0	0	0.84963	1	46263	46263		0.6015	0	1	706870000			38126	3425;7900	18882	18960	44215	44215					0.15096380896477513
VKTTAKLIV	9	Unmodified	_VKTTAKLIV_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;TTN|p.R11195Efs*5|1|0.15|ENSG00000155657|chr2:178674318-178674318|A/-|frameshift_variant;TTN|p.L7641Yfs*6|1|0.07|ENSG00000155657|chr2:178719621-178719621|T/-|frameshift_variant;TTN|p.C7689Pfs*18|1|0.03|ENSG00000155657|chr2:178719373-178719374|CA/-|frameshift_variant;TTN|p.S7694Qfs*32|1|0.04|ENSG00000155657|chr2:178719360-178719360|G/-|frameshift_variant;TTN|p.G8550Tfs*3|1|0.05|ENSG00000155657|chr2:178714032-178714059|ATTTGTTGTCACTTGTTAGCTCTTTTCC/-|frameshift_variant;TTN|p.E9011Nfs*14|1|0.03|ENSG00000155657|chr2:178711255-178711255|T/-|frameshift_variant;TTN|p.T6904Lfs*6|1|0.08|ENSG00000155657|chr2:178723439-178723439|T/-|frameshift_variant;TTN|p.V5150Afs*3|1|0.06|ENSG00000155657|chr2:178732661-178732661|A/-|frameshift_variant;TTN|p.R4157*|1|0.07|ENSG00000155657|chr2:178739814-178739815|-/C|frameshift_variant;TTN|p.L3483Ifs*33|1|0.11|ENSG00000155657|chr2:178741835-178741836|-/AT|frameshift_variant;nc|ENSG00000155657|Q8WZ42-6|TTN;TTN|p.E3802Dfs*59|1|0.05|ENSG00000155657|chr2:178740876-178740877|-/GAAGTAACAAGGTACATGCACATGATGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	972.645194	971.637917	2.9176	0.0028378	-1.5488	-0.0015064	1.3688	0.0013314	972.6434897246511	107.66	0.23687	107.82	107.68	107.92	0.15781	0.049048	-0.00032896	NaN	0.6015	47	12	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2833200000			38127	3425;7900	18882	18960							0.15096380896477513
VKVILLPAL	9	Unmodified	_VKVILLPAL_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense;chr3:189023348-189023750|247|10.3|0.01|9.43|+|0|TE_info:L1PA3,L1PA3_dup2320,L1,LINE,donor,-,189017230,189023348|None,TPRG1|70	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.3396789431572	2	483.341521	964.668489	3.5286	0.0017055	-4.2406	-0.0020497	-0.712	-0.00034414	483.33950836351056	105.53	0.17461	105.58	105.53	105.71	0.056801					16	8	2	0	0	0	0.85019	1	44822	44822		0.52476	0	1	18897000			38128	259	18883	18961	44216	44216					0.1847415928149303
VKVILLPAL	9	Unmodified	_VKVILLPAL_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense;chr3:189023348-189023750|247|10.3|0.01|9.43|+|0|TE_info:L1PA3,L1PA3_dup2320,L1,LINE,donor,-,189017230,189023348|None,TPRG1|70	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|434|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	483.341521	964.668489	3.115	0.0015056	-4.7136	-0.0022783	-1.5986	-0.00077267	483.33926123101804	105.47	0.18026	105.64	105.59	105.77	0.16679	0.028151	-0.00028741	NaN	0.52476	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7044900			38129	259	18883	18961							0.1847415928149303
VKVKAKQKKRY	11	Unmodified	_VKVKAKQKKRY_					0	0	0			REV__ENSG00000187730|ENST00000378585|GABRD	REV__ENSG00000187730|ENST00000378585|GABRD	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	344.2272216677666	4	344.727861	1374.88234	1.3365	0.00046074	3.6766	0.0012674	5.0132	0.0017282	344.7288431906243	44.935	0.53373	45.262	44.84	45.374	0.32674					25	17	2	0	0	0	0.14606	1	18766	18766		0.094841	0	1	689130	+		38130	11546	18884	18962	44217	44217					0.20989259710245278
VKVKGRAR	8	Unmodified	_VKVKGRAR_					0	0	0			REV__ENSG00000183530|ENST00000327423|PRR14L	REV__ENSG00000183530|ENST00000327423|PRR14L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.5371887087822	3	305.206649	912.598118	0.052555	1.604E-05	-3.6949	-0.0011277	-3.6423	-0.0011117	305.2054471390568	28.021	0.12196	29.796	29.696	29.818	1.7754					5	3	2	0	0	0	2.3239	1	11701	11701		1.4819	0	1	235930	+		38131	11396	18885	18963	44218	44218					0.138322987364063
VKVKIPIPTP	10	Unmodified	_VKVKIPIPTP_					0	0	0			REV__ENSG00000046604|ENST00000261590|DSG2	REV__ENSG00000046604|ENST00000261590|DSG2	MSMS	GG20161007_CRH_Patient100_W632_01	3	546.3644286990166	2	546.362985	1090.71142	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.74	1	104.9	104.4	105.4	0.16055								0	0	0	0.66166	1	44450	44450		1.6526	1.1279	1		+		38132	8604	18886	18964	44219	44219					0.16968929338941052
VKVKRWLA	8	Unmodified	_VKVKRWLA_					0	0	0			REV__ENST00000434618.6_1_6:33281817-33282111:-|nuORF	REV__ENST00000434618.6_1_6:33281817-33282111:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3270751833916	2	500.326737	998.63892	1.1212	0.00056094	-0.10546	-5.2766E-05	1.0157	0.00050818	500.32655078019866	107.66	0.33857	107.66	107.45	107.79	0					57	17	6	0	0	0	0.89198	1	46224	46224		0	0	1	452580000	+		38133	13044	18887	18965	44220	44220					0.13954640056010703
VKVLKVLTK	9	Unmodified	_VKVLKVLTK_					0	0	0		ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	ENSG00000126947|ENST00000372829|ARMCX1	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2462951540947	3	343.24611	1026.7165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.48	1	106.53	106.03	107.03	0.05455								0	0	0	0.42693	1	45375	45375		0	0	1				38134	2327	18888	18966	44221	44221					0.20421233201523137
VKVPQLAL	8	Unmodified	_VKVPQLAL_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2875549197197	2	434.286746	866.558939	3.1533	0.0013694	-0.79465	-0.00034511	2.3586	0.0010243	434.2864265691392	107.76	0.25307	107.82	107.69	107.95	0.052452					56	13	6	0	0	0	0.89198	1	46220	46220		0	0	1	1158100000			38135	4389	18889	18967	44222	44222					0.12032153662153178
VKVPQLAL	8	Unmodified	_VKVPQLAL_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2883788943291	2	434.286746	866.558939	3.3072	0.0014363	-0.76997	-0.00033439	2.5372	0.0011019	434.28662504920493	107.75	0.28011	107.91	107.77	108.05	0.15781					62	15	6	0	0	0	0.89198	2	46446	46446;46522		0	0	1	14075000000			38136	4389	18889	18967	44223;44224	44223					0.12032153662153178
VKVPQLAL	8	Unmodified	_VKVPQLAL_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.2887145876884	2	434.286746	866.558939	3.305	0.0014353	-0.24076	-0.00010456	3.0643	0.0013308	434.2866951006377	108.22	0.52005	108.38	108.29	108.81	0.15781					49	29	3	0	0	0	0.89198	1	46715	46715		0	0	1	46856000			38137	4389	18889	18967	44225	44225					0.12032153662153178
VKVPQLAL	8	Unmodified	_VKVPQLAL_					0	0	0		ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	ENSG00000175928|ENST00000319331|LRRN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.2880737185478	2	434.286746	866.558939	3.3132	0.0014389	-1.4046	-0.00061001	1.9086	0.00082889	434.2863276613101	107.73	0.44734	107.89	107.56	108.01	0.15795					66	23	6	0	0	0	0.89198	1	46380	46380		0	0	1	10441000000			38138	4389	18889	18967	44226	44226					0.12032153662153178
VKVRHKARE	9	Unmodified	_VKVRHKARE_					0	0	0		ENSG00000170871|ENST00000307659|KIAA0232	ENSG00000170871|ENST00000307659|KIAA0232	ENSG00000170871|ENST00000307659|KIAA0232	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	561.8466064333916	2	561.846356	1121.67816	1.5118	0.00084938	-2.5883	-0.0014542	-1.0765	-0.00060484	561.8456039183558	80.946	0.59013	80.946	80.728	81.319	0					38	18	3	0	0	0	0.83753	1	33719	33719		1.8442	0	1	2144400			38139	4165	18890	18968	44227	44227					0.12218740339585565
VKWKRAFKKR	10	Unmodified	_VKWKRAFKKR_					0	0	0		ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	449.6235229372978	3	449.622574	1345.84589	1.4989	0.00067394	1.4465	0.00065039	2.9454	0.0013243	449.62287651075536	95.918	0.26292	95.918	95.773	96.035	0					21	8	3	0	0	0	0.89803	1	40095	40095		0.13989	0	1	10141000			38140	5691	18891	18969	44228	44228					0.18680427604203942
VKWKRAFKKR	10	Unmodified	_VKWKRAFKKR_					0	0	0		ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	449.6248351931572	3	449.622574	1345.84589	3.2479	0.0014603	0.65539	0.00029468	3.9032	0.001755	449.62279181098796	95.834	0.24789	95.957	95.831	96.079	0.12331					26	8	4	0	0	0	0.89803	1	40134	40134		0.69767	0.2894	1	19023000			38141	5691	18891	18969	44229	44229					0.18680427604203942
VKWKRAFKKR	10	Unmodified	_VKWKRAFKKR_					0	0	0		ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	ENST00000277141.10_2_9:88967948-88968005:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	449.622574	1345.84589	1.4989	0.00067394	1.4465	0.00065039	2.9454	0.0013243	449.62287651075536	95.918	0.26292	95.918	95.773	96.035	0	-0.019652	0.00059051	NaN	0.13989	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10141000			38142	5691	18891	18969							0.18680427604203942
VKYPLHAIM	9	Unmodified	_VKYPLHAIM_					0	0	0		WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant;ENST00000507765.1_1_4:6290695-6304192:+|nuORF;ENSG00000109501|ENST00000226760|WFS1	WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant	WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.2985107302666	2	536.304613	1070.59467	2.1198	0.0011369	1.8797	0.0010081	3.9995	0.002145	536.3065590229194	43.668	0.60991	45.022	44.705	45.315	1.3536					53	19	3	0	0	0	0.66839	1	18412	18412		8.5933	0.68312	1	3705900			38143	1667	18892	18970	44230	44230					0.0621986784751698
VKYWITID	8	Unmodified	_VKYWITID_					0	0	0		nc|ENSG00000133116|Q9UEF7-2|KL;ENSG00000133116|ENST00000380099|KL	nc|ENSG00000133116|Q9UEF7-2|KL	nc|ENSG00000133116|Q9UEF7-2|KL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	518.7874023318291	2	519.286943	1036.55933	2.7032	0.0014037	2.0834	0.0010819	4.7866	0.0024856	519.2869497288515	78.096	0.35821	79.376	79.229	79.587	1.2809					14	11	2	0	0	0	2.3239	1	32790	32790		16.942	14.883	1	2492700			38144	2561	18893	18971	44231	44231					0.042515285913850676
VLAAAKKE	8	Unmodified	_VLAAAKKE_					0	0	0			REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2584411501884	2	415.260728	828.506903	0.66902	0.00027782	-2.3008	-0.00095544	-1.6318	-0.00067762	415.2595980101045	78.494	0.47294	78.494	78.283	78.756	0					35	14	3	0	0	0	0.88958	2	32668	32613;32668		2.8892	0	1	2920100	+		38145	15092	18894	18972	44232;44233	44233					0.08578990248417995
VLAAAKKE	8	Unmodified	_VLAAAKKE_					0	0	0			REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2623779177666	2	415.260728	828.506903	1.5279	0.00063448	2.8739	0.0011934	4.4018	0.0018279	415.2618080170901	86.19	0.42467	86.19	85.914	86.339	0					37	13	3	0	0	0	0.89176	1	35967	35967		0.79363	0	1	3164700	+		38146	15092	18894	18972	44234	44234					0.08578990248417995
VLAAAKKE	8	Unmodified	_VLAAAKKE_					0	0	0			REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	REV__tr|A0A553SPJ6|A0A553SPJ6_NIACIDUF1232domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_26485PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	415.260728	828.506903	2.3306	0.00096781	-3.2041	-0.0013305	-0.87352	-0.00036274	415.25915405739903	77.373	0.50999	78.654	78.313	78.823	1.2809	0.031635	-0.00011112	NaN	2.8892	35	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1531200	+		38147	15092	18894	18972							0.08578990248417995
VLAAANPV	8	Unmodified	_VLAAANPV_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7255126833916	2	377.726521	753.438489	-0.22885	-8.6442E-05	-1.5261	-0.00057644	-1.7549	-0.00066288	377.72563865433824	64.254	0.90953	64.254	63.651	64.56	0					48	28	3	0	0	0	0.89176	2	26767	26767;26816		0.79363	0	1	3488400			38148	1766	18895	18973	44235;44236	44235					0.05190745668562613
VLAAANPV	8	Unmodified	_VLAAANPV_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	377.7262756228447	2	377.726521	753.438489	1.7986	0.00067937	-2.3653	-0.00089343	-0.56669	-0.00021405	377.7251257779504	64.142	0.90231	64.471	63.788	64.691	0.32899					45	28	3	0	0	0	0.89176	2	26809	26809;26867		0.79363	0	1	3046000			38149	1766	18895	18973	44237;44238	44237					0.05190745668562613
VLAAANPV	8	Unmodified	_VLAAANPV_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7263976931572	2	377.726521	753.438489	2.0909	0.0007898	-2.8178	-0.0010644	-0.7269	-0.00027457	377.7250264475004	63.126	0.91487	64.54	63.838	64.753	1.4134					54	29	3	0	0	0	0.89176	1	26396	26396		0.79363	0	1	3478500			38150	1766	18895	18973	44239	44239					0.05190745668562613
VLAAANPV	8	Unmodified	_VLAAANPV_					0	0	0		nc|ENSG00000112118|P25205-2|MCM3;ENSG00000112118|ENST00000596288|MCM3;ENST00000476448.1_1_6:52141011-52144220:-|nuORF	nc|ENSG00000112118|P25205-2|MCM3	nc|ENSG00000112118|P25205-2|MCM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.7270690798759	2	377.726521	753.438489	2.459	0.00092884	-3.3504	-0.0012655	-0.89135	-0.00033668	377.7248672158315	62.644	0.88928	64.588	63.955	64.845	1.9444					47	28	3	0	0	0	0.89176	1	26214	26214		0.79363	0	1	3993900			38151	1766	18895	18973	44240	44240					0.05190745668562613
VLAAAQIA	8	Unmodified	_VLAAAQIA_					0	0	0		ENST00000403951.6_1_7:14942804-14942915:-|nuORF	ENST00000403951.6_1_7:14942804-14942915:-|nuORF	ENST00000403951.6_1_7:14942804-14942915:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	378.9753600955009	2	378.734346	755.454139	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.541	1	85.179	84.679	85.679	1.6379								0	0	0	1.0178	1	35040	35040		0.79363	0	1				38152	6356	18896	18974	44241	44241					0.06663032185599604
VLAAGRNR	8	Unmodified	_VLAAGRNR_					0	0	0		ENST00000546525.5_1_6:169959876-170034596:-|nuORF;nc|ENSG00000184465|A2RRH5-2|WDR27;nc|ENSG00000184465|A2RRH5|WDR27;ENSG00000184465|ENST00000448612|WDR27	ENST00000546525.5_1_6:169959876-170034596:-|nuORF	ENST00000546525.5_1_6:169959876-170034596:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	428.7599670290947	2	428.759218	855.503883	2.6519	0.001137	-0.6767	-0.00029014	1.9752	0.00084688	428.7588306057057	80.429	0.46368	81.68	81.417	81.881	1.2512					34	14	3	0	0	0	0.89176	1	33753	33753		0.79363	0	1	3618100			38153	4694	18897	18975	44242	44242					0.07035159914266842
VLAAKLAQ	8	Unmodified	_VLAAKLAQ_					0	0	0		ENST00000513811.5_1_4:15471657-15545375:+|nuORF;nc|ENSG00000048342|Q9P2K1-2|CC2D2A;ENSG00000048342|ENST00000424120|CC2D2A	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	407.2633544802666	2	407.263271	812.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.961	1	61.93	61.43	62.43	1.969								0	0	0	1.0178	1	25163	25163		0.79363	0	1				38154	7046	18898	18976	44243	44243					0.09823294111026826
VLAARLLFYSL	11	Unmodified	_VLAARLLFYSL_					0	0	0			REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	317.1955444216728	4	317.195862	1264.75434	0.74877	0.00023751	-0.91	-0.00028865	-0.16122	-5.1139E-05	317.1954584195939	35.724	0.53128	36.026	35.734	36.265	0.30197					97	49	3	0	0	0	1.0156	1	15012	15012		2.8433	0.21205	1	35490000	+		38155	14279	18899	18977	44244	44244					0.13255699396381715
VLAARLLFYSL	11	Unmodified	_VLAARLLFYSL_					0	0	0			REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1958495974541	4	317.195862	1264.75434	-0.84596	-0.00026834	1.109	0.00035177	0.26304	8.3436E-05	317.19607346253804	34.372	0.36042	35.647	35.493	35.853	1.2746					86	42	3	0	0	0	1.0156	1	14405	14405		2.8433	0	1	44543000	+		38156	14279	18899	18977	44245	44245					0.13255699396381715
VLAARLLFYSL	11	Unmodified	_VLAARLLFYSL_					0	0	0			REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	REV__L1MCa_dup1455|chr3:161109768-161111719:+|1.3579652635712427|0.3175433071941228|2.1|429.0|130|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	317.1960632205009	4	317.195862	1264.75434	-0.88261	-0.00027996	0.99948	0.00031703	0.11687	3.707E-05	317.19609650528974	34.745	0.40807	36.02	35.853	36.262	1.2746					87	40	3	0	0	0	1.0224	1	14573	14573		2.4348	0.69251	1	31566000	+		38157	14279	18899	18977	44246	44246					0.13255699396381715
VLACLLDFL	9	Unmodified	_VLACLLDFL_					0	0	0		ENSG00000158246|ENST00000289166|TENT5B	ENSG00000158246|ENST00000289166|TENT5B	ENSG00000158246|ENST00000289166|TENT5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7887145876884	2	503.785721	1005.55689	4.1129	0.002072	-0.19486	-9.817E-05	3.918	0.0019738	503.7862269413712	89.846	0.31794	91.251	91.113	91.431	1.4044					14	9	2	0	0	0	0.34572	1	37875	37875		23.148	0	1	249500			38158	3495	18900	18978	44247	44247					0.0543335686206774
VLACLLDFL	9	Unmodified	_VLACLLDFL_					0	0	0		ENSG00000158246|ENST00000289166|TENT5B	ENSG00000158246|ENST00000289166|TENT5B	ENSG00000158246|ENST00000289166|TENT5B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	503.785721	1005.55689	4.5681	0.0023013	-1.0655	-0.00053677	3.5026	0.0017646	503.78726795346563	90.392	0.4174	91.374	91.173	91.59	0.98157	0.061703	-0.00071162	NaN	23.148	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	320380			38159	3495	18900	18978							0.0543335686206774
VLADLKVQL	9	Unmodified	_VLADLKVQL_					0	0	0		ENSG00000101132|ENST00000371419|PFDN4;ENST00000487129.1_1_20:52825073-52835686:+|nuORF	ENSG00000101132|ENST00000371419|PFDN4	ENSG00000101132|ENST00000371419|PFDN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.8158752322197	2	499.815867	997.617182	1.7534	0.00087637	-1.7131	-0.00085625	0.040263	2.0124E-05	499.81510710827774	55.373	0.22826	55.373	55.263	55.492	0					13	8	2	0	0	0	0.040497	1	23053	23053		75.761	21.928	1	1901700			38160	1321	18901	18979	44248	44248					0.11827790516804271
VLADLKVQL	9	Unmodified	_VLADLKVQL_					0	0	0		ENSG00000101132|ENST00000371419|PFDN4;ENST00000487129.1_1_20:52825073-52835686:+|nuORF	ENSG00000101132|ENST00000371419|PFDN4	ENSG00000101132|ENST00000371419|PFDN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	499.8148681521416	2	499.815867	997.617182	2.5899	0.0012945	-3.2832	-0.001641	-0.69335	-0.00034655	499.8144198753763	54.772	0.21284	55.093	54.989	55.202	0.32088					11	7	2	0	0	0	0.10473	1	22944	22944		47.749	5.9091	1	1789500			38161	1321	18901	18979	44249	44249					0.11827790516804271
VLADLKVQL	9	Unmodified	_VLADLKVQL_					0	0	0		ENSG00000101132|ENST00000371419|PFDN4;ENST00000487129.1_1_20:52825073-52835686:+|nuORF	ENSG00000101132|ENST00000371419|PFDN4	ENSG00000101132|ENST00000371419|PFDN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.8155090212822	2	499.815867	997.617182	1.0705	0.00053505	-1.4028	-0.00070114	-0.3323	-0.00016609	499.81518928952306	53.55	0.22314	54.95	54.863	55.086	1.4005					15	9	2	0	0	0	0.00020031	1	22413	22413		142.08	60.189	1	6068800			38162	1321	18901	18979	44250	44250					0.11827790516804271
VLADLKVQL	9	Unmodified	_VLADLKVQL_					0	0	0		ENSG00000101132|ENST00000371419|PFDN4;ENST00000487129.1_1_20:52825073-52835686:+|nuORF	ENSG00000101132|ENST00000371419|PFDN4	ENSG00000101132|ENST00000371419|PFDN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.8145934939384	2	499.815867	997.617182	0.6217	0.00031074	-1.4316	-0.00071552	-0.80987	-0.00040479	499.81483431691663	53.042	0.25202	55.012	54.859	55.111	1.9697					21	15	2	0	0	0	0.019071	1	22196	22196		100.09	42.369	1	4326300			38163	1321	18901	18979	44251	44251					0.11827790516804271
VLADLSDIK	9	Unmodified	_VLADLSDIK_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2825195193291	2	487.281857	972.549162	2.4004	0.0011697	0.56291	0.00027429	2.9633	0.0014439	487.2819651896642	40.052	0.56366	40.365	40.164	40.728	0.31263					44	17	4	0	0	0	0.40005	1	16912	16912		20.415	2.2796	1	7774900	+		38164	11052	18902	18980	44252	44252					0.0617892086613665
VLADLSDIK	9	Unmodified	_VLADLSDIK_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.2825500369072	2	487.281857	972.549162	1.9861	0.00096781	-0.52091	-0.00025383	1.4652	0.00071398	487.28127244817597	38.789	0.36305	40.085	39.895	40.258	1.2961					19	11	2	0	0	0	0.20244	1	16231	16231		32.786	0.4802	1	5691000	+		38165	11052	18902	18980	44253	44253					0.0617892086613665
VLADLSDIK	9	Unmodified	_VLADLSDIK_					0	0	0			REV__nc|ENSG00000171962|Q9H069-2|DRC3	REV__nc|ENSG00000171962|Q9H069-2|DRC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2830383181572	2	487.281857	972.549162	0.98674	0.00048082	0.99536	0.00048502	1.9821	0.00096584	487.28191597627256	38.2	0.375	40.02	39.818	40.193	1.8202					20	11	2	0	0	0	0.28372	1	16043	16043		26.268	0.86883	1	3039200	+		38166	11052	18902	18980	44254	44254					0.0617892086613665
VLADQVWTL	9	Unmodified	_VLADQVWTL_					0	0	0		nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-8|OGG1;nc|ENSG00000114026|O15527-2|OGG1;ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1	nc|ENSG00000114026|O15527-6|OGG1	nc|ENSG00000114026|O15527-6|OGG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.7908203005791	2	522.78985	1043.56515	1.9396	0.001014	2.1087	0.0011024	4.0483	0.0021164	522.7894131129441	72.663	0.44444	72.663	72.396	72.84	0					27	13	3	0	0	0	0.13873	1	30250	30250		39.957	15.937	1	1610700			38167	1846	18903	18981	44255	44255					0.04510627103036313
VLADQVWTL	9	Unmodified	_VLADQVWTL_					0	0	0		nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-8|OGG1;nc|ENSG00000114026|O15527-2|OGG1;ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1	nc|ENSG00000114026|O15527-6|OGG1	nc|ENSG00000114026|O15527-6|OGG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.7913085818291	2	522.78985	1043.56515	2.0266	0.0010595	2.9821	0.001559	5.0088	0.0026185	522.7900967244308	72.106	0.41463	72.431	72.259	72.674	0.32494					24	12	3	0	0	0	0.10993	1	30192	30192		46.021	19.137	1	1991500			38168	1846	18903	18981	44256	44256					0.04510627103036313
VLADQVWTL	9	Unmodified	_VLADQVWTL_					0	0	0		nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-8|OGG1;nc|ENSG00000114026|O15527-2|OGG1;ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1	nc|ENSG00000114026|O15527-6|OGG1	nc|ENSG00000114026|O15527-6|OGG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7906982302666	2	522.78985	1043.56515	2.7646	0.0014453	-0.57116	-0.0002986	2.1934	0.0011467	522.7893843958539	71.064	0.36089	72.405	72.21	72.571	1.3415					28	11	3	0	0	0	0.026836	1	29816	29816		92.491	42.558	1	10729000			38169	1846	18903	18981	44257	44257					0.04510627103036313
VLADQVWTL	9	Unmodified	_VLADQVWTL_					0	0	0		nc|ENSG00000114026|O15527-6|OGG1;nc|ENSG00000114026|O15527-8|OGG1;nc|ENSG00000114026|O15527-2|OGG1;ENSG00000114026|ENST00000344629|OGG1;nc|ENSG00000114026|O15527-7|OGG1;nc|ENSG00000114026|O15527-5|OGG1;nc|ENSG00000114026|O15527-3|OGG1;nc|ENSG00000114026|O15527-4|OGG1	nc|ENSG00000114026|O15527-6|OGG1	nc|ENSG00000114026|O15527-6|OGG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7902709841728	2	522.78985	1043.56515	1.3576	0.00070972	0.338	0.0001767	1.6956	0.00088642	522.7895116823604	70.545	0.33292	72.383	72.228	72.561	1.8378					26	10	3	0	0	0	0.033504	1	29617	29617		81.89	34.142	1	5545700			38170	1846	18903	18981	44258	44258					0.04510627103036313
VLAELVRLG	9	Unmodified	_VLAELVRLG_					0	0	0		ZC3H12B|p.K478Qfs*52|1|0.06|ENSG00000102053|chrX:65502123-65502124|-/C|frameshift_variant;ENSG00000102053|ENST00000338957|ZC3H12B	ZC3H12B|p.K478Qfs*52|1|0.06|ENSG00000102053|chrX:65502123-65502124|-/C|frameshift_variant	ZC3H12B|p.K478Qfs*52|1|0.06|ENSG00000102053|chrX:65502123-65502124|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.3084289431572	2	485.30821	968.601866	1.9723	0.00095719	-0.12014	-5.8307E-05	1.8522	0.00089889	485.3081175450842	53.536	0.53936	53.536	53.365	53.905	0					40	16	4	0	0	0	0.28372	1	22283	22283		26.268	0	1	11342000			38171	1377	18904	18982	44259	44259					0.11630923719633302
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1927368044853	2	322.192314	642.370075	-0.25865	-8.3334E-05	2.1339	0.00068752	1.8752	0.00060418	322.19286345192415	16.638	0.47681	16.789	16.615	17.092	0.15093					38	16	3	0	0	0	0.89198	3	6887	6887;6926;7002		0	0	1	27577000			38172	7545	18905	18983	44260;44261;44262	44260					0.03458501088732646
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	322.1946288943291	2	322.192314	642.370075	2.021	0.00065114	4.1942	0.0013514	6.2152	0.0020025	322.1936032528796	93.964	0.28665	94.109	93.942	94.228	0.14493					13	8	2	0	0	0	0.89198	1	39332	39332		0	0	1	491200			38173	7545	18905	18983	44263	44263					0.03458501088732646
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	322.2131835818291	2	322.192314	642.370075	-0.055542	-1.7895E-05	2.7276	0.00087882	2.6721	0.00086093	322.1927552811441	26.49	0.30988	27.762	27.622	27.932	1.2715					13	9	2	0	0	0	2.3239	1	11149	11149		0	0	1	422280			38174	7545	18905	18983	44264	44264					0.03458501088732646
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	322.192314	642.370075	-0.96875	-0.00031212	3.3605	0.0010827	2.3917	0.0007706	322.1932647209245	16.039	0.42925	16.865	16.737	17.166	0.82643	0.0052976	0.0003238	NaN	0	47	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26836000			38175	7545	18905	18983							0.03458501088732646
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	322.192314	642.370075	2.9174	0.00093995	3.0053	0.00096828	5.9226	0.0019082	322.19310169864883	92.946	0.35986	93.817	93.605	93.965	0.87176	-0.14573	-0.00034589	NaN	0	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	516240			38176	7545	18905	18983							0.03458501088732646
VLAGAVGG	8	Unmodified	_VLAGAVGG_					0	0	0		ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	ENST00000602351.5_1_19:49645338-49651464:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	322.192314	642.370075	-0.38708	-0.00012471	2.7833	0.00089677	2.3963	0.00077206	322.1931303747455	15.886	0.34759	16.926	16.805	17.153	1.0392	0.065409	-4.811E-05	NaN	0	38	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25820000			38177	7545	18905	18983							0.03458501088732646
VLAGSVLYL	9	Unmodified	_VLAGSVLYL_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	934.5639526247978	1	934.560795	933.553519	2.3428	0.0021895	-1.3172	-0.001231	1.0256	0.00095846	934.5601269982212	89.035	0.35111	89.035	88.795	89.146	0					14	10	2	0	0	0	0.10722	1	37204	37204		46.921	0.89992	1	1026800	+		38178	11353	18906	18984	44265	44265					0.08408430079703066
VLAGSVLYL	9	Unmodified	_VLAGSVLYL_					0	0	0			REV__ENSG00000182450|ENST00000422670|KCNK4	REV__ENSG00000182450|ENST00000422670|KCNK4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	934.560795	933.553519	2.3428	0.0021895	-1.3172	-0.001231	1.0256	0.00095846	934.5601269982212	89.035	0.35111	89.035	88.795	89.146	0	0	0	NaN	46.921	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1026800	+		38179	11353	18906	18984							0.08408430079703066
VLAHFITLF	9	Unmodified	_VLAHFITLF_					0	0	0			REV__ENSG00000205089|ENST00000378731|CCNI2	REV__ENSG00000205089|ENST00000378731|CCNI2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8184081912041	2	530.813128	1059.6117	2.0445	0.0010852	2.3964	0.001272	4.4408	0.0023573	530.8142953149015	69.16	2.2442	70.526	69.352	71.596	1.3657					144	72	4	0	0	0	0.64949	1	28966	28966		9.3474	0.75416	1	15337000	+		38180	11809	18907	18985	44266	44266					0.0842811172499296
VLAKLTLLIIF	11	Unmodified	_VLAKLTLLIIF_					0	0	0		tr|A0A7D6VNY7|A0A7D6VNY7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14550PE=4SV=1	tr|A0A7D6VNY7|A0A7D6VNY7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14550PE=4SV=1	tr|A0A7D6VNY7|A0A7D6VNY7_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14550PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	414.8394958376884	3	415.284454	1242.83153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.45	1	111.61	111.11	112.11	0.16445								0	0	0	0.63775	1	48366	48366		0.094841	0	1				38181	16749	18908	18986	44267	44267					0.21982917612717756
VLALHALPAL	10	Unmodified	_VLALHALPAL_					0	0	0			REV__tr|A0A553SS27|A0A553SS27_NIACIHistidineammonia-lyaseOS=NialliacirculansOX=1397GN=hutHPE=3SV=1	REV__tr|A0A553SS27|A0A553SS27_NIACIHistidineammonia-lyaseOS=NialliacirculansOX=1397GN=hutHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3275024294853	2	509.326402	1016.63825	1.874	0.0009545	-0.79367	-0.00040424	1.0804	0.00055026	509.3257880139376	71.272	0.6012	71.272	71.067	71.668	0					56	18	4	0	0	0	0.79742	1	29751	29751		12.532	0	1	18799000	+		38182	15189	18909	18987	44268	44268					0.13059800616292705
VLALHALPAL	10	Unmodified	_VLALHALPAL_					0	0	0			REV__tr|A0A553SS27|A0A553SS27_NIACIHistidineammonia-lyaseOS=NialliacirculansOX=1397GN=hutHPE=3SV=1	REV__tr|A0A553SS27|A0A553SS27_NIACIHistidineammonia-lyaseOS=NialliacirculansOX=1397GN=hutHPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3252136111259	2	509.326402	1016.63825	1.7271	0.00087966	-3.228	-0.0016441	-1.5009	-0.00076445	509.32472671157507	68.72	0.73042	70.573	70.217	70.948	1.853					69	23	5	0	0	0	0.70643	1	28885	28885		18.135	0	1	72425000	+		38183	15189	18909	18987	44269	44269					0.13059800616292705
VLALMQKHRR	10	Unmodified	_VLALMQKHRR_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000533079.5_1_11:64955425-64973207:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9213744997978	3	417.920403	1250.73938	0.28031	0.00011715	2.3145	0.00096728	2.5948	0.0010844	417.9212062468807	30.646	0.54891	30.646	30.347	30.896	0					60	17	4	0	0	0	0.89803	1	12813	12813		0.69767	0.69767	1	7871500			38184	594	18910	18988	44270	44270					0.12403929047354723
VLALMQKHRR	10	Unmodified	_VLALMQKHRR_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000533079.5_1_11:64955425-64973207:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.9208862185478	3	417.920403	1250.73938	0.71364	0.00029824	0.39817	0.0001664	1.1118	0.00046465	417.9204187410362	28.316	0.54719	30.091	29.696	30.243	1.7754					46	17	3	0	0	0	0.89803	1	11831	11831		0.69767	0.07084	1	5925600			38185	594	18910	18988	44271	44271					0.12403929047354723
VLAPRLPSLL	10	Unmodified	_VLAPRLPSLL_					0	0	0			REV__ENST00000491277.1_1_1:214706191-214706551:-|nuORF	REV__ENST00000491277.1_1_1:214706191-214706551:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2387267947197	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.602	1	83.298	82.798	83.798	1.6959								0	0	0	0.66254	1	34236	34236		0.15932	0	1		+		38186	13429	18911	18989	44272	44272					0.15527758679149883
VLAPRVLRA	9	Unmodified	_VLAPRVLRA_					0	0	0		ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2225219607353	3	332.222188	993.644734	0.19503	6.4795E-05	0.4567	0.00015172	0.65173	0.00021652	332.22252667304053	23.469	0.40249	23.702	23.506	23.908	0.23306					30	12	3	0	0	0	0.19075	1	9793	9793		24.991	3.454	1	5415800			38187	691	18912	18990	44273	44273					0.14765738567689368
VLAPRVLRA	9	Unmodified	_VLAPRVLRA_					0	0	0		ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	332.2224609255791	3	332.222188	993.644734	-0.11975	-3.9784E-05	0.85668	0.00028461	0.73693	0.00024483	332.22260918811344	22.378	0.31742	23.555	23.381	23.699	1.177					26	9	4	0	0	0	0.19075	2	9366	9320;9366		24.991	3.454	1	7072700			38188	691	18912	18990	44274;44275	44275					0.14765738567689368
VLAPRVLRA	9	Unmodified	_VLAPRVLRA_					0	0	0		ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	ENSG00000049449|ENST00000054950|RCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.2222473025322	3	332.222188	993.644734	-0.060437	-2.0078E-05	0.034456	1.1447E-05	-0.025981	-8.6313E-06	332.222249406903	21.913	0.29643	23.529	23.377	23.674	1.6158					31	9	5	0	0	0	0.13873	2	9158	9114;9158		29.841	4.8496	1	9622500			38189	691	18912	18990	44276;44277	44277					0.14765738567689368
VLAQMLMMF	9	Unmodified	_VLAQMLMMF_					0	0	0			REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	REV__nc|ENSG00000178904|Q6ZPD9-2|DPY19L3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.8310424685478	2	542.273609	1082.53267	2.9613	0.0016058	-0.43429	-0.00023551	2.527	0.0013703	542.2744651118578	62.878	0.21294	64.291	64.226	64.439	1.4134					10	6	2	0	0	0	0.11463	1	26386	26386		7.9102	1.5561	1	888560	+		38190	11259	18913	18991	44278	44278					-0.005299428874650403
VLAQRLRERA	10	Unmodified	_VLAQRLRERA_					0	0	0			REV__ENSG00000116032|ENST00000234389|GRIN3B	REV__ENSG00000116032|ENST00000234389|GRIN3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3723022341728	2	606.370195	1210.72584	2.5372	0.0015385	0.72807	0.00044148	3.2653	0.00198	606.370635971915	76.828	0.85344	78.122	77.983	78.836	1.2938					41	26	2	0	0	0	0.88022	1	32310	32310		3.5965	0	1	2266000	+		38191	9465	18914	18992	44279	44279					0.12890394539795125
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	728.4471923708916	1	728.441349	727.434072	1.3864	0.0010099	3.9678	0.0028903	5.3542	0.0039003	728.4441349690632	100.34	0.1864	100.34	100.23	100.41	0					12	5	3	0	0	0	0.89198	1	41997	41997		0	0	1	3991100	+		38192	11404	18915	18993	44280	44280					0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	365.3176452517509	2	364.724313	727.434072	2.1755	0.00079346	3.8585	0.0014073	6.034	0.0022007	364.72490747490764	100.19	0.1272	100.37	100.28	100.41	0.18048					5	3	2	0	0	0	2.3239	1	42177	42177		0	0	1	505390	+		38193	11404	18915	18993	44281	44281					0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	728.4422485232353	1	728.441349	727.434072	2.6397	0.0019229	0.49541	0.00036088	3.1352	0.0022838	728.441618146477	107.77	0.1298	107.93	107.86	107.99	0.15795					10	6	2	0	0	0	0.89198	1	46388	46388		0	0	1	42023000	+		38194	11404	18915	18993	44282	44282					0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	728.441349	727.434072	1.3864	0.0010099	3.9678	0.0028903	5.3542	0.0039003	728.4441349690632	100.34	0.1864	100.34	100.23	100.41	0	-0.015957	0.0001012	NaN	0	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3991100	+		38195	11404	18915	18993							0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	364.724313	727.434072	-1.3196	-0.00048129	6.4626	0.0023571	5.143	0.0018758	364.7264692958458	100.33	0.1864	100.33	100.23	100.41	0	-0.023733	0.0010793	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1361000	+		38196	11404	18915	18993							0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	728.441349	727.434072	2.712	0.0019755	5.6886	0.0041438	8.4005	0.0061193	728.4450110224573	100.29	0.15915	100.36	100.25	100.41	0.072716	0.010899	0.0013547	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4036100	+		38197	11404	18915	18993							0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	364.724313	727.434072	2.5311	0.00092316	4.5349	0.001654	7.066	0.0025771	364.72583459738667	100.29	0.18951	100.36	100.25	100.44	0.072716	0.010422	-0.00032692	NaN	0	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1822500	+		38198	11404	18915	18993							0.059452812456811444
VLARGVGG	8	Unmodified	_VLARGVGG_					0	0	0			REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	REV__OLFML1|p.P253A|1|0.25|ENSG00000183801|chr11:7509736-7509736|C/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	728.441349	727.434072	2.6854	0.0019561	1.3242	0.00096458	4.0096	0.0029207	728.4416671042667	100.18	0.1564	100.36	100.28	100.44	0.18047	0.005058	-0.0018245	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2420500	+		38199	11404	18915	18993							0.059452812456811444
VLARQPIW	8	Unmodified	_VLARQPIW_					0	0	0		tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	tr|A0A7D7ADT8|A0A7D7ADT8_9CLOTAminopeptidasePfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_00235PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7962219119072	2	491.795269	981.575986	0.97628	0.00048013	1.699	0.00083554	2.6752	0.0013157	491.7956435095711	30.755	0.47204	32.57	32.262	32.734	1.8151					34	15	3	0	0	0	0.89051	1	12948	12948		2.3027	0	1	1962500			38200	17329	18916	18994	44283	44283					0.08446074267999393
VLARVVSI	8	Unmodified	_VLARVVSI_					0	0	0		AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|14|1|anti-sense	AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|14|1|anti-sense	AluY_dup35562|chr6:33325560-33325873:+|2.071996534774159|0.0033360021601532|9.28|373.0|14|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	856.5660278201103	1	856.561464	855.554188	2.9837	0.0025557	0.20279	0.0001737	3.1865	0.0027294	856.5611501844703	106.8	0.51048	106.96	106.68	107.19	0.15781					31	23	2	0	0	0	0.89008	1	45820	45820		2.5775	0	1	7341200			38201	55	18917	18995	44284	44284					0.12063269519433106
VLASHLFQL	9	Unmodified	_VLASHLFQL_					0	0	0		TBC1D9|p.R893H|1|0.2|ENSG00000109436|chr4:140634016-140634016|C/T|missense_variant	TBC1D9|p.R893H|1|0.2|ENSG00000109436|chr4:140634016-140634016|C/T|missense_variant	TBC1D9|p.R893H|1|0.2|ENSG00000109436|chr4:140634016-140634016|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	514.3056518435478	2	514.300384	1026.58622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.567	1	81.847	81.347	82.347	0.2802								0	0	0	0.42693	1	34104	34104		4.3292	0	1				38202	16020	18918	18996	44285	44285					0.07398637202550162
VLASRGPR	8	Unmodified	_VLASRGPR_					0	0	0			REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2	REV__nc|ENSG00000177303|Q8WXE0-2|CASKIN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	428.2629577517509	2	428.261594	854.508634	2.6907	0.0011523	1.0039	0.00042995	3.6946	0.0015823	428.2619177183056	72.037	0.89125	73.861	73.507	74.399	1.824					78	28	5	0	0	0	0.89178	1	30262	30262		0.69038	0	1	144060000	+		38203	11212	18919	18997	44286	44286					0.07556044057048439
VLASSALEAI	10	Unmodified	_VLASSALEAI_					0	0	0		tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	tr|A0A553SPI0|A0A553SPI0_NIACIAcyltransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26430PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2827636599541	2	487.281857	972.549162	1.7347	0.0008453	0.50568	0.00024641	2.2404	0.0010917	487.28207250451453	42.366	0.4395	42.366	42.165	42.604	0					28	13	3	0	0	0	0.32206	1	17764	17764		37.974	5.6685	1	1732500			38204	16470	18920	18998	44287	44287					0.06178920866148019
VLATGSGIVI	10	Unmodified	_VLATGSGIVI_					0	0	0		nc|ENSG00000167695|Q8TBR7-1|TLCD3A;ENSG00000167695|ENST00000308278|TLCD3A;ENST00000570699.1_1_17:636236-644807:+|nuORF	nc|ENSG00000167695|Q8TBR7-1|TLCD3A	nc|ENSG00000167695|Q8TBR7-1|TLCD3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.2885314822197	2	465.286943	928.559333	2.1427	0.00099697	3.0043	0.0013979	5.147	0.0023948	465.2876640144889	45.672	0.43713	47.047	46.897	47.334	1.3751					21	13	2	0	0	0	0.57775	1	19124	19124		24.021	0	1	1272100			38205	3986	18921	18999	44288	44288					0.09219528591370363
VLATVLELN	9	Unmodified	_VLATVLELN_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	971.5817138552666	1	971.577174	970.569897	2.8383	0.0027577	-0.73642	-0.00071549	2.1019	0.0020422	971.5765110032295	64.52	0.27706	65.927	65.77	66.047	1.4071					13	8	2	0	0	0	0.042029	1	27075	27075		74.423	3.2892	1	824570			38206	4405	18922	19000	44289	44289					0.08343511245800528
VLATVLELN	9	Unmodified	_VLATVLELN_					0	0	0		ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	ENSG00000176387|ENST00000326152|HSD11B2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	971.577174	970.569897	2.5833	0.0025098	0.60243	0.00058531	3.1857	0.0030951	971.5764263103301	64.007	0.24959	65.935	65.795	66.045	1.928	0.0037688	0.00053242	NaN	74.423	9	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	527000			38207	4405	18922	19000							0.08343511245800528
VLAVLLRG	8	Unmodified	_VLAVLLRG_					0	0	0		ENSG00000182687|ENST00000329003|GALR2	ENSG00000182687|ENST00000329003|GALR2	ENSG00000182687|ENST00000329003|GALR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5700561404228	1	840.566549	839.559273	3.029	0.0025461	3.6472	0.0030657	6.6762	0.0056118	840.5697656015972	109.32	0.21471	109.48	109.36	109.58	0.1548					16	9	3	0	0	0	0.89176	1	47392	47392		0.79363	0	1	10710000			38208	4621	18923	19001	44290	44290					0.13307573382053306
VLAWGLLNV	9	Unmodified	_VLAWGLLNV_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.7983276247978	2	492.797478	983.580402	1.8499	0.00091161	0.99834	0.00049198	2.8482	0.0014036	492.79771641363277	91.702	0.3179	91.702	91.469	91.787	0					22	9	3	0	0	0	0.098957	2	38269	38269;38317		49.669	26.52	1	1782200			38209	3165	18924	19002	44291;44292	44291					0.08795538690912963
VLAWGLLNV	9	Unmodified	_VLAWGLLNV_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	492.7989684939384	2	492.797478	983.580402	3.317	0.0016346	-0.51827	-0.0002554	2.7987	0.0013792	492.7972479221935	91.195	0.45433	91.386	91.108	91.562	0.19042					30	13	4	0	0	0	0.070759	2	38220	38174;38220		59.795	29.57	1	1527700			38210	3165	18924	19002	44293;44294	44294					0.08795538690912963
VLAWGLLNV	9	Unmodified	_VLAWGLLNV_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7991515994072	2	492.797478	983.580402	4.4582	0.002197	-0.016693	-8.2261E-06	4.4415	0.0021888	492.7975600788717	90.321	0.51373	91.302	91.076	91.59	0.98157					43	15	4	0	0	0	0.046105	3	38020	38020;38066;38122		70.865	34.82	1	2774200			38211	3165	18924	19002	44295;44296;44297	44295					0.08795538690912963
VLAWGLLNV	9	Unmodified	_VLAWGLLNV_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209;nc|ENSG00000146842|Q96SK2-4|TMEM209;nc|ENSG00000146842|Q96SK2-3|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7997924685478	2	492.797478	983.580402	4.4028	0.0021697	0.039423	1.9428E-05	4.4422	0.0021891	492.7974563452798	89.854	0.38036	91.258	91.05	91.431	1.4045					35	11	4	0	0	0	0.046105	3	37855	37808;37855;37899		70.865	34.82	1	2363800			38212	3165	18924	19002	44298;44299;44300	44299					0.08795538690912963
VLAYERYI	8	Unmodified	_VLAYERYI_					0	0	0		ENSG00000054277|ENST00000366554|OPN3	ENSG00000054277|ENST00000366554|OPN3	ENSG00000054277|ENST00000366554|OPN3	MSMS	GG20161007_CRH_Patient100_W632_01	3	513.7859985232353	2	513.784567	1025.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.85	1	73.192	72.692	73.692	1.3415								0	0	0	1.0178	1	30156	30156		11.114	0	1				38213	712	18925	19003	44301	44301					0.04282644448608153
VLCILQAELP	10	Unmodified	_VLCILQAELP_					0	0	0		ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2	ENSG00000108506|ENST00000251334|INTS2	ENSG00000108506|ENST00000251334|INTS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8164550662041	2	549.81501	1097.61547	3.8519	0.0021178	-2.6334	-0.0014479	1.2184	0.00066992	549.813336673549	95.067	0.37346	95.808	95.55	95.924	0.74124					32	13	3	0	0	0	0.70618	1	39939	39939		18.146	1.0335	1	9527700			38214	1636	18926	19004	44302	44302					0.07056413436544062
VLCILQAELP	10	Unmodified	_VLCILQAELP_					0	0	0		ENSG00000108506|ENST00000251334|INTS2;nc|ENSG00000108506|Q9H0H0|INTS2	ENSG00000108506|ENST00000251334|INTS2	ENSG00000108506|ENST00000251334|INTS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.8149902224541	2	549.81501	1097.61547	3.2063	0.0017629	-2.6675	-0.0014666	0.53887	0.00029628	549.8132577549644	94.648	0.42465	95.836	95.59	96.015	1.1887					37	13	4	0	0	0	0.57775	1	39819	39819		24.021	5.8742	1	7905800			38215	1636	18926	19004	44303	44303					0.07056413436544062
VLCKKPRG	8	Unmodified	_VLCKKPRG_					0	0	0			REV__ENSG00000150628|ENST00000280191|SPATA4	REV__ENSG00000150628|ENST00000280191|SPATA4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	450.7551757693291	2	450.776022	899.537492	2.9818	0.0013441	0.75169	0.00033884	3.7335	0.001683	450.77637681521196	74.842	0.62336	76.624	76.26	76.884	1.7817					55	19	4	0	0	0	2.3239	1	31500	31500		2.8892	0	1	31940000	+		38216	10384	18927	19005	44304	44304					0.08370445361822476
VLCKLLFFL	9	Unmodified	_VLCKLLFFL_					0	0	0			REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|50|1|anti-sense	REV__L1M3_dup291|chr1:173794566-173795729:+|1.281363593639287|0.3648644439828962|1.81|429.0|50|1|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3358032107353	2	548.335381	1094.65621	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.884	1	97.168	96.668	97.668	0.28442								0	0	0	0.22015	1	40765	40765		24.674	0	1		+		38217	14253	18928	19006	44305	44305					0.11266799546820039
VLCLLWLP	8	Unmodified	_VLCLLWLP_					0	0	0			REV__CACHD1|p.I144Nfs*23|1|0.06|ENSG00000158966|chr1:64629418-64629419|-/CAACACAGTGACACCCTGTCTCTACAAAAAT|frameshift_variant	REV__CACHD1|p.I144Nfs*23|1|0.06|ENSG00000158966|chr1:64629418-64629419|-/CAACACAGTGACACCCTGTCTCTACAAAAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.7867614626884	2	478.785524	955.556496	2.1649	0.0010365	-0.61195	-0.00029299	1.5529	0.00074351	478.78511205098243	74.98	0.43968	74.98	74.745	75.185	0					39	13	4	0	0	0	0.89176	1	31158	31158		0.79363	0	1	8706400	+		38218	8173	18929	19007	44306	44306					0.0769398193286861
VLCRSLEK	8	Unmodified	_VLCRSLEK_					0	0	0			REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	REV__nc|ENSG00000071203|Q9NXJ0-2|MS4A12	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.1964294314384	3	316.516272	946.526987	-3.4593	-0.0010949	-1.3348	-0.0004225	-4.7941	-0.0015174	316.5160218744487	13.481	0.37084	13.481	13.269	13.64	0					12	11	2	0	0	0	2.3239	1	5624	5624		0.40072	0	1	178350	+		38219	8724	18930	19008	44307	44307					0.05158417916720737
VLDAHFLVL	9	Unmodified	_VLDAHFLVL_					0	0	0		ENST00000481320.5_1_10:123727168-123733579:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A;ENSG00000107672|ENST00000369023|NSMCE4A	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.8055297732353	2	513.80276	1025.59097	2.7585	0.0014173	0.22804	0.00011717	2.9865	0.0015345	513.8038271981386	69.717	0.31555	71.07	70.896	71.212	1.3536					21	9	3	0	0	0	0.19075	1	29270	29270		34.102	3.8776	1	1220400			38220	1606	18931	19009	44308	44308					0.0791952134532039
VLDAHFLVL	9	Unmodified	_VLDAHFLVL_					0	0	0		ENST00000481320.5_1_10:123727168-123733579:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A;ENSG00000107672|ENST00000369023|NSMCE4A	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.8046142458916	2	513.80276	1025.59097	1.8949	0.00097361	1.1669	0.00059955	3.0618	0.0015732	513.8041192783035	69.183	0.28095	71.036	70.887	71.168	1.853					14	8	2	0	0	0	0.13873	1	29038	29038		39.957	7.8404	1	1117600			38221	1606	18931	19009	44309	44309					0.0791952134532039
VLDAHFLVL	9	Unmodified	_VLDAHFLVL_					0	0	0		ENST00000481320.5_1_10:123727168-123733579:-|nuORF;nc|ENSG00000107672|Q9NXX6-2|NSMCE4A;ENSG00000107672|ENST00000369023|NSMCE4A	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	ENST00000481320.5_1_10:123727168-123733579:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	513.80276	1025.59097	1.6111	0.00082778	0.52426	0.00026936	2.1353	0.0010971	513.8033698425219	70.9	0.19324	71.224	71.143	71.336	0.32359	0.11401	-7.271E-05	NaN	39.957	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	232240			38222	1606	18931	19009							0.0791952134532039
VLDDAVFVL	9	Unmodified	_VLDDAVFVL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9;ENST00000564733.1_1_16:21666528-21666750:+|nuORF	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	990.5519286990166	1	990.550625	989.543348	2.2103	0.0021894	-1.3088	-0.0012964	0.9015	0.00089298	990.5492985348578	81.466	0.39386	81.746	81.574	81.968	0.2802					20	12	2	0	0	0	0.10294	1	34085	34085		48.346	14.243	1	2002600			38223	4974	18932	19010	44310	44310					0.04815822354487409
VLDDAVFVL	9	Unmodified	_VLDDAVFVL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9;ENST00000564733.1_1_16:21666528-21666750:+|nuORF	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	990.5509521365166	1	990.550625	989.543348	4.1268	0.0040878	-0.75875	-0.00075158	3.3681	0.0033363	990.5498117771792	80.574	0.67356	81.825	81.357	82.03	1.2512					33	21	2	0	0	0	0.19075	1	33772	33772		34.102	0	1	3459200			38224	4974	18932	19010	44311	44311					0.04815822354487409
VLDDAVFVL	9	Unmodified	_VLDDAVFVL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9;ENST00000564733.1_1_16:21666528-21666750:+|nuORF	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.5515624880791	1	990.550625	989.543348	1.6728	0.001657	1.4445	0.0014308	3.1173	0.0030878	990.5523372759958	80.112	0.36502	81.829	81.631	81.996	1.7167					28	11	3	0	0	0	0.051699	2	33598	33543;33598		67.344	6.9543	1	3517500			38225	4974	18932	19010	44312;44313	44313					0.04815822354487409
VLDDKLVFV	9	Unmodified	_VLDDKLVFV_					0	0	0		nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3085204958916	2	524.307875	1046.6012	2.27	0.0011902	-0.6763	-0.00035459	1.5937	0.00083557	524.30745316194	60.057	0.55325	60.057	59.827	60.38	0					49	18	4	0	0	0	0.026411	3	25044	24993;25044;25093		93.166	25.085	1	12797000			38226	4436;6471	18933	19011	44314;44315;44316	44315					0.07976084279880524
VLDDKLVFV	9	Unmodified	_VLDDKLVFV_					0	0	0		nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3091308474541	2	524.307875	1046.6012	2.5565	0.0013404	-0.018795	-9.8546E-06	2.5377	0.0013305	524.3078424089728	59.432	0.47482	59.758	59.584	60.058	0.32553					43	16	4	0	0	0	0.026411	3	24921	24871;24921;24960		93.166	34.487	1	14945000			38227	4436;6471	18933	19011	44317;44318;44319	44318					0.07976084279880524
VLDDKLVFV	9	Unmodified	_VLDDKLVFV_					0	0	0		nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3080932497978	2	524.307875	1046.6012	0.74674	0.00039152	-1.2818	-0.00067206	-0.53507	-0.00028054	524.3079745741111	58.222	0.74462	59.64	59.29	60.035	1.4181					82	29	4	0	0	0	0.026411	3	24405	24405;24453;24493		93.166	24.75	1	46978000			38228	4436;6471	18933	19011	44320;44321;44322	44320					0.07976084279880524
VLDDKLVFV	9	Unmodified	_VLDDKLVFV_					0	0	0		nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENSG00000177119|ENST00000320560|ANO6;nc|ENSG00000177119|Q4KMQ2-4|ANO6;nc|ENSG00000177119|Q4KMQ2-2|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	nc|ENSG00000177119|Q4KMQ2-3|ANO6;ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3080322146416	2	524.307875	1046.6012	0.35263	0.00018489	-0.16346	-8.5705E-05	0.18917	9.9182E-05	524.308098169687	57.703	0.44381	59.673	59.458	59.901	1.969					51	18	4	0	0	0	0.0070725	4	24173	24133;24173;24213;24260		114.2	46.121	1	46088000			38229	4436;6471	18933	19011	44323;44324;44325;44326	44324					0.07976084279880524
VLDDKLYVV	9	Unmodified	_VLDDKLYVV_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;nc|ENSG00000109790|Q96PQ7-4|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3067504763603	2	532.305332	1062.59611	1.6598	0.0008835	0.57552	0.00030635	2.2353	0.0011899	532.3058768509973	46.101	0.31469	47.476	47.303	47.617	1.3751					25	9	3	0	0	0	0.039278	1	19305	19305		76.825	34.985	1	3923100			38230	1678	18934	19012	44327	44327					0.06731780417271693
VLDDKLYVV	9	Unmodified	_VLDDKLYVV_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;nc|ENSG00000109790|Q96PQ7-4|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3068115115166	2	532.305332	1062.59611	1.6893	0.00089925	1.3433	0.00071503	3.0326	0.0016143	532.3058210908057	45.677	0.35112	47.647	47.407	47.758	1.9703					18	10	2	0	0	0	0.066197	1	19115	19115		61.602	21.645	1	3553400			38231	1678	18934	19012	44328	44328					0.06731780417271693
VLDDLLYAV	9	Unmodified	_VLDDLLYAV_					0	0	0		nc|ENSG00000076321|Q9Y2M5-2|KLHL20;ENSG00000076321|ENST00000209884|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	nc|ENSG00000076321|Q9Y2M5-2|KLHL20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1020.565661609173	1	1020.56119	1019.55391	2.0895	0.0021324	2.0279	0.0020696	4.1174	0.004202	1020.5648068010424	78.64	0.27973	79.907	79.787	80.066	1.2668					12	8	2	0	0	0	0.12174	1	33029	33029		42.095	13.608	1	927290			38232	946	18935	19013	44329	44329					0.044918050089108874
VLDKARVRKF	10	Unmodified	_VLDKARVRKF_					0	0	0		ENSG00000146090|ENST00000361132|RASGEF1C	ENSG00000146090|ENST00000361132|RASGEF1C	ENSG00000146090|ENST00000361132|RASGEF1C	MSMS	GG20161007_CRH_Patient100_A02_02	2	616.3843871951103	2	616.385314	1230.75608	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.089	1	46.418	45.918	46.918	0.32899								0	0	0	0.66193	1	19343	19343		1.1933	0.23107	1				38233	3134	18936	19014	44330	44330					0.14992753204978726
VLDLDVDFE	9	Unmodified	_VLDLDVDFE_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;C9orf3-HIATL1|3|fusion;C9orf3-HIATL1|4|fusion;nc|ENSG00000148120|Q8N6M6-3|AOPEP	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_01	1	532.7627441287041	2	532.760955	1063.50736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.07	1	73.07	72.57	73.57	0								0	0	0	0.36184	1	30422	30422		12.532	3.9383	1				38234	110	18937	19015	44331	44331					-0.02185679613035063
VLDLKSIALG	10	Unmodified	_VLDLKSIALG_					0	0	0			REV__ENST00000597683.1_1_19:24216413-24232238:+|nuORF	REV__ENST00000597683.1_1_19:24216413-24232238:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8221313357353	2	514.82115	1027.62775	2.1329	0.0010981	-0.42278	-0.00021766	1.7101	0.0008804	514.8210791471612	71.515	0.3411	72.857	72.689	73.03	1.3415					18	10	2	0	0	0	0.75645	1	30009	30009		15.847	4.2069	1	9118000	+		38235	14104	18938	19016	44332	44332					0.1150377317121638
VLDSAELVK	9	Unmodified	_VLDSAELVK_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2838317751884	2	487.281857	972.549162	1.6584	0.00080812	0.42364	0.00020643	2.0821	0.0010146	487.28203953026565	40.534	0.94254	40.534	40.299	41.241	0					63	29	4	0	0	0	0.063746	2	16928	16928;17092		62.573	12.64	1	17831000	+		38236	11606	18939	19017	44333;44334	44333					0.06178920866148019
VLDSAELVK	9	Unmodified	_VLDSAELVK_					0	0	0			REV__ENSG00000189233|ENST00000413272|NUGGC	REV__ENSG00000189233|ENST00000413272|NUGGC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2833740115166	2	487.281857	972.549162	2.4004	0.0011697	0.56291	0.00027429	2.9633	0.0014439	487.2819651896642	40.052	0.56366	40.365	40.164	40.728	0.31263					44	17	4	0	0	0	0.063746	2	16831	16784;16831		62.573	6.3957	1	7774900	+		38237	11606	18939	19017	44335;44336	44336					0.06178920866148019
VLDSVDVRL	9	Unmodified	_VLDSVDVRL_					0	0	0		ENSG00000169105|ENST00000306243|CHST14	ENSG00000169105|ENST00000306243|CHST14	ENSG00000169105|ENST00000306243|CHST14	MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2925598025322	2	508.292756	1014.57096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.827	1	46.192	45.692	46.692	1.3653								0	0	0	0.21581	1	18789	18789		24.991	7.8781	1				38238	4068	18940	19018	44337	44337					0.06425725614712974
VLDVDLQGV	9	Unmodified	_VLDVDLQGV_					0	0	0		ENST00000498115.1_1_1:228334565-228335341:+|nuORF;ENST00000464858.5_1_1:228333604-228336395:+|nuORF;nc|ENSG00000143774|Q16774|GUK1;ENST00000486668.5_1_1:228333307-228336550:+|nuORF;ENST00000492871.5_1_1:228328930-228336395:+|nuORF;ENSG00000143774|ENST00000453943|GUK1;ENST00000465025.1_1_1:228335125-228336550:+|nuORF;ENST00000485838.5_1_1:228327993-228336550:+|nuORF;nc|ENSG00000143774|Q16774-3|GUK1	ENST00000498115.1_1_1:228334565-228335341:+|nuORF	ENST00000498115.1_1_1:228334565-228335341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2661620974541	2	479.266207	956.517862	0.60869	0.00029172	-0.29453	-0.00014116	0.31416	0.00015057	479.26578979824797	57.419	0.16341	58.833	58.74	58.904	1.4145					8	5	2	0	0	0	0.1735	1	24068	24068		36.044	9.1605	1	1543800			38239	3051	18941	19019	44338	44338					0.03786347832055981
VLDVDLQGV	9	Unmodified	_VLDVDLQGV_					0	0	0		ENST00000498115.1_1_1:228334565-228335341:+|nuORF;ENST00000464858.5_1_1:228333604-228336395:+|nuORF;nc|ENSG00000143774|Q16774|GUK1;ENST00000486668.5_1_1:228333307-228336550:+|nuORF;ENST00000492871.5_1_1:228328930-228336395:+|nuORF;ENSG00000143774|ENST00000453943|GUK1;ENST00000465025.1_1_1:228335125-228336550:+|nuORF;ENST00000485838.5_1_1:228327993-228336550:+|nuORF;nc|ENSG00000143774|Q16774-3|GUK1	ENST00000498115.1_1_1:228334565-228335341:+|nuORF	ENST00000498115.1_1_1:228334565-228335341:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2674438357353	2	479.266207	956.517862	0.72112	0.00034561	0.11237	5.3856E-05	0.8335	0.00039947	479.2662959249164	56.892	0.18226	58.86	58.751	58.933	1.9684					8	5	2	0	0	0	0.19075	1	23872	23872		34.102	12.356	1	2362600			38240	3051	18941	19019	44339	44339					0.03786347832055981
VLEAIGGK	8	Unmodified	_VLEAIGGK_					0	0	0		tr|A0A7D6VUH7|A0A7D6VUH7_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17505PE=4SV=1	tr|A0A7D6VUH7|A0A7D6VUH7_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17505PE=4SV=1	tr|A0A7D6VUH7|A0A7D6VUH7_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_17505PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	393.7410766482353	2	393.739628	785.464704	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.404	1	58.727	58.227	59.227	0.32298								0	0	0	1.0178	1	24479	24479		0.69038	0	1				38241	16950	18942	19020	44340	44340					0.06339014840057189
VLEIITSK	8	Unmodified	_VLEIITSK_					0	0	0		Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|74|2|sense	Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|74|2|sense	Harlequin-int_dup17|chr1:46326040-46329561:-|5.077814921392451|0.3399966488246573|3.9|429.0|74|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.7804138064384	2	451.781493	901.548434	1.5821	0.00071478	-1.2625	-0.00057035	0.31968	0.00014442	451.7806213585282	68.04	0.88654	68.04	67.85	68.737	0					41	27	2	0	0	0	0.89178	1	28402	28402		0.69038	0	1	1297300			38242	7602	18943	19021	44341	44341					0.09372126217090226
VLEIVLVTNNP	11	Unmodified	_VLEIVLVTNNP_					0	0	0		tr|A0A553SKB4|A0A553SKB4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18305PE=4SV=1	tr|A0A553SKB4|A0A553SKB4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18305PE=4SV=1	tr|A0A553SKB4|A0A553SKB4_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1210.708178699017	1	1210.70417	1209.69689	2.5206	0.0030517	-0.73141	-0.00088553	1.7892	0.0021662	1210.7029874030966	69.577	0.25054	69.9	69.721	69.972	0.32224					12	7	2	0	0	0	0.93654	1	29105	29105		7.609	0	1	607520			38243	16282	18944	19022	44342	44342					0.10042812400138246
VLEKAGFHK	9	Unmodified	_VLEKAGFHK_					0	0	0		tr|A0A553SMD8|A0A553SMD8_NIACI[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_22265PE=3SV=1	tr|A0A553SMD8|A0A553SMD8_NIACI[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_22265PE=3SV=1	tr|A0A553SMD8|A0A553SMD8_NIACI[ribosomalproteinuS5]-alanineN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_22265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.5345336794853	3	343.534431	1027.58147	0.083565	2.8707E-05	1.0256	0.00035233	1.1092	0.00038104	343.5347591249794	25.13	0.63678	26.39	26.195	26.832	1.2594					35	20	2	0	0	0	0.77876	1	10498	10498		4.1895	0.24511	1	3571600			38244	16375	18945	19023	44343	44343					0.06877753059779934
VLEKILFGVF	10	Unmodified	_VLEKILFGVF_					0	0	0		ENSG00000255012|ENST00000641076|OR5M1;ENSG00000254834|ENST00000526538|OR5M10	ENSG00000255012|ENST00000641076|OR5M1	ENSG00000255012|ENST00000641076|OR5M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	582.8546020388603	2	582.854993	1163.69543	2.6118	0.0015223	-4.2686	-0.002488	-1.6568	-0.00096569	582.8522951607189	96.917	0.16048	97.022	96.91	97.07	0.105					10	4	3	0	0	0	0.89646	1	40548	40548		1.8442	0.19162	1	2980000			38245	5397	18946	19024	44344	44344					0.12013223102030679
VLENAEGAR	9	Unmodified	_VLENAEGAR_					0	0	0		ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	ENSG00000113013|ENST00000297185|HSPA9	ENSG00000113013|ENST00000297185|HSPA9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	479.7877990603447	2	479.751256	957.487959	0.029106	1.3964E-05	1.1895	0.00057066	1.2186	0.00058462	479.7519783748486	11.733	0.094779	12.521	12.473	12.568	0.78751					4	2	2	0	0	0	0.063532	1	4875	4875		43.772	3.8151	1	573890			38246	1804	18947	19025	44345	44345					0.007514088867196733
VLENAEGAR	9	Unmodified	_VLENAEGAR_					0	0	0		ENSG00000113013|ENST00000297185|HSPA9;ENST00000507097.5_1_5:137893182-137909502:-|nuORF;ENST00000506477.5_1_5:137906647-137911007:-|nuORF	ENSG00000113013|ENST00000297185|HSPA9	ENSG00000113013|ENST00000297185|HSPA9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	479.751256	957.487959	-0.17013	-8.1619E-05	1.2204	0.00058547	1.0502	0.00050386	479.75168925568374	11.842	0.15466	12.536	12.448	12.602	0.69395	0.007531	1.6137E-05	NaN	43.772	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	321400			38247	1804	18947	19025							0.007514088867196733
VLERQRLDKRL	11	Unmodified	_VLERQRLDKRL_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;ENSG00000141519|ENST00000397545|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	475.9616577029228	3	475.959803	1424.85758	2.3902	0.0011377	0.52053	0.00024775	2.9108	0.0013854	475.9602637532336	53.212	2.1881	53.212	52.821	55.009	0					239	72	6	0	0	0	0.94496	1	22324	22324		3.5927	1.3399	1	350990000			38248	2964	18948	19026	44346	44346					0.1621457983687833
VLERQRLDKRL	11	Unmodified	_VLERQRLDKRL_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;ENSG00000141519|ENST00000397545|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.9611999392509	3	475.959803	1424.85758	0.82785	0.00039402	2.8725	0.0013672	3.7003	0.0017612	475.96244168629164	51.308	2.4007	52.702	52.226	54.627	1.3938					231	78	6	0	0	0	0.96769	1	21669	21669		4.7159	0.30977	1	578340000			38249	2964	18948	19026	44347	44347					0.1621457983687833
VLERQRLDKRL	11	Unmodified	_VLERQRLDKRL_					0	0	0		nc|ENSG00000141519|Q4G0X9-3|CCDC40;ENST00000574799.5_1_17:78022329-78073571:+|nuORF;ENSG00000141519|ENST00000397545|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	nc|ENSG00000141519|Q4G0X9-3|CCDC40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	475.9611083865166	3	475.959803	1424.85758	0.49385	0.00023505	2.9906	0.0014234	3.4844	0.0016584	475.96273407866005	50.646	2.1044	52.621	52.219	54.323	1.9753					251	72	7	0	0	0	0.96769	1	21440	21440		4.7159	0.30977	1	734820000			38250	2964	18948	19026	44348	44348					0.1621457983687833
VLFAGGGS	8	Unmodified	_VLFAGGGS_					0	0	0			REV__ENST00000568763.1_1_16:30195026-30196791:+|nuORF	REV__ENST00000568763.1_1_16:30195026-30196791:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	354.1890746951103	2	354.189771	706.36499	-0.75693	-0.0002681	-0.59421	-0.00021046	-1.3511	-0.00047856	354.18955276121665	62.989	0.43859	62.989	62.801	63.24	0					32	13	3	0	0	0	0.89176	1	26316	26316		0.79363	0	1	3325100	+		38251	8404	18949	19027	44349	44349					6.1972260937182E-05
VLFAGGGS	8	Unmodified	_VLFAGGGS_					0	0	0			REV__ENST00000568763.1_1_16:30195026-30196791:+|nuORF	REV__ENST00000568763.1_1_16:30195026-30196791:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	354.189771	706.36499	-0.75693	-0.0002681	-0.59421	-0.00021046	-1.3511	-0.00047856	354.18955276121665	62.989	0.43859	62.989	62.801	63.24	0	-0.26681	0.00098064	NaN	0.79363	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3325100	+		38252	8404	18949	19027							6.1972260937182E-05
VLFDVSIMAV	10	Unmodified	_VLFDVSIMAV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18;ENST00000591276.1_1_19:990686-991256:+|nuORF	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3028442263603	2	547.301736	1092.58892	3.9309	0.0021514	0.18305	0.00010018	4.1139	0.0022516	547.3016428768653	91.533	0.40633	92.469	92.182	92.588	0.93623					31	12	3	0	0	0	0.48057	1	38553	38553		28.487	8.0332	1	1985500			38253	784	18950	19028	44350	44350					0.04632724545194833
VLFDVSIMAV	10	Unmodified	_VLFDVSIMAV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18;ENST00000591276.1_1_19:990686-991256:+|nuORF	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	547.301736	1092.58892	1.7015	0.00093122	1.5876	0.00086888	3.2891	0.0018001	547.3025847055711	92.61	0.2709	92.61	92.502	92.773	0	0.11981	0.0014272	NaN	28.487	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	393620			38254	784	18950	19028							0.04632724545194833
VLFDVSIMAV	10	Unmodified	_VLFDVSIMAV_					0	0	0		ENSG00000065268|ENST00000585809|WDR18;ENST00000591276.1_1_19:990686-991256:+|nuORF	ENSG00000065268|ENST00000585809|WDR18	ENSG00000065268|ENST00000585809|WDR18	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	547.301736	1092.58892	2.6493	0.0014499	-1.5741	-0.00086149	1.0752	0.00058845	547.2998217636344	92.287	0.15637	92.458	92.38	92.536	0.17091	-0.031854	-0.0020335	NaN	28.487	10	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	194940			38255	784	18950	19028							0.04632724545194833
VLFEGRTVQL	10	Unmodified	_VLFEGRTVQL_					0	0	0		AGTPBP1|p.Y651Ifs*14|1|0.12|ENSG00000135049|chr9:85632726-85632726|A/-|frameshift_variant;nc|ENSG00000135049|Q9UPW5-2|AGTPBP1;ENSG00000135049|ENST00000357081|AGTPBP1;nc|ENSG00000135049|Q9UPW5-3|AGTPBP1	AGTPBP1|p.Y651Ifs*14|1|0.12|ENSG00000135049|chr9:85632726-85632726|A/-|frameshift_variant	AGTPBP1|p.Y651Ifs*14|1|0.12|ENSG00000135049|chr9:85632726-85632726|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3368408083916	2	581.334956	1160.65536	1.6731	0.00097265	0.11309	6.5741E-05	1.7862	0.0010384	581.3349472998502	49.399	0.21984	51.376	51.223	51.443	1.9772					9	6	2	0	0	0	0.76954	1	20709	20709		15.248	2.7169	1	616380			38256	29	18951	19029	44351	44351					0.08145676431468019
VLFENTDSVHL	11	Unmodified	_VLFENTDSVHL_					0	0	0		ENST00000495224.1_1_1:235295030-235299397:-|nuORF;ENSG00000188739|ENST00000408888|RBM34	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	637.3253051638603	2	637.324785	1272.63502	1.6478	0.0010502	-1.0247	-0.00065307	0.62309	0.00039711	637.3240956710106	52.752	0.23109	53.075	52.971	53.202	0.32283					9	7	2	0	0	0	0.09159	1	22117	22117		57.722	40.609	1	1530000			38257	4876	18952	19030	44352	44352					0.009604609810139664
VLFENTDSVHL	11	Unmodified	_VLFENTDSVHL_					0	0	0		ENST00000495224.1_1_1:235295030-235299397:-|nuORF;ENSG00000188739|ENST00000408888|RBM34	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.3249389529228	2	637.324785	1272.63502	0.47427	0.00030226	-2.528	-0.0016112	-2.0538	-0.0013089	637.3244580689136	51.631	0.23345	53.027	52.95	53.184	1.3966					13	7	2	0	0	0	0.0089405	1	21628	21628		106.94	70.896	1	4516800			38258	4876	18952	19030	44353	44353					0.009604609810139664
VLFENTDSVHL	11	Unmodified	_VLFENTDSVHL_					0	0	0		ENST00000495224.1_1_1:235295030-235299397:-|nuORF;ENSG00000188739|ENST00000408888|RBM34	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	ENST00000495224.1_1_1:235295030-235299397:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	637.3227416872978	2	637.324785	1272.63502	-0.6366	-0.00040572	-1.2708	-0.00080991	-1.9074	-0.0012156	637.3241652495698	51.066	0.28301	53.042	52.882	53.165	1.9753					19	10	3	0	0	0	0.0057462	1	21404	21404		110.67	74.631	1	3339400			38259	4876	18952	19030	44354	44354					0.009604609810139664
VLFESSNKIL	10	Unmodified	_VLFESSNKIL_					0	0	0			REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3312255740166	2	575.329339	1148.64412	1.8831	0.0010834	0.78685	0.0004527	2.67	0.0015361	575.3295611749289	38.811	0.22218	40.107	39.974	40.197	1.2961					10	6	2	0	0	0	0.65574	1	16270	16270		20.454	3.3407	1	1321300	+		38260	12308	18953	19031	44355	44355					0.07574854337326542
VLFESSNKIL	10	Unmodified	_VLFESSNKIL_					0	0	0			REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	575.329339	1148.64412	1.8831	0.0010834	0.78685	0.0004527	2.67	0.0015361	575.3295611749289	38.811	0.22218	40.107	39.974	40.197	1.2961	0.027219	-0.00045602	NaN	20.454	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1321300	+		38261	12308	18953	19031							0.07574854337326542
VLFESSNKIL	10	Unmodified	_VLFESSNKIL_					0	0	0			REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	REV__ENST00000298875.8_1_14:92588431-92592517:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	575.329339	1148.64412	1.0109	0.0005816	1.9684	0.0011325	2.9793	0.0017141	575.3301067557411	38.232	0.22011	40.053	39.879	40.099	1.8202	-0.027219	0.00090358	NaN	20.454	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	673110	+		38262	12308	18953	19031							0.07574854337326542
VLFFDNVLV	9	Unmodified	_VLFFDNVLV_					0	0	0			REV__INADL-EIF3E|1|fusion	REV__INADL-EIF3E|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.3046752810478	2	533.302593	1064.59063	4.2539	0.0022686	-0.35345	-0.0001885	3.9005	0.0020801	533.3021206390406	93.341	0.4199	94.213	93.965	94.385	0.87176					30	12	3	0	0	0	0.12174	1	39276	39276		42.095	2.1372	1	3178500	+		38263	14232	18954	19032	44356	44356					0.06092101625449686
VLFFDNVLV	9	Unmodified	_VLFFDNVLV_					0	0	0			REV__INADL-EIF3E|1|fusion	REV__INADL-EIF3E|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.3049194216728	2	533.302593	1064.59063	3.5114	0.0018726	0.50264	0.00026806	4.014	0.0021407	533.3025167308316	92.874	0.41674	94.151	93.875	94.292	1.277					27	12	3	0	0	0	0.15478	1	39091	39091		38.151	12.752	1	2231100	+		38264	14232	18954	19032	44357	44357					0.06092101625449686
VLFGLLREV	9	Unmodified	_VLFGLLREV_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;ENST00000569935.1_1_16:72137048-72138114:+|nuORF	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3239013552666	2	523.32386	1044.63317	1.9834	0.0010379	-0.98728	-0.00051667	0.99609	0.00052128	523.3232692268908	73.512	0.54704	73.512	73.341	73.888	0					31	17	3	0	0	0	0.16939	2	30598	30598;30650		36.506	4.5328	1	2791300			38265	2935	18955	19033	44358;44359	44358					0.1126349675369056
VLFGLLREV	9	Unmodified	_VLFGLLREV_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;ENST00000569935.1_1_16:72137048-72138114:+|nuORF	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3262817263603	2	523.32386	1044.63317	2.2878	0.0011973	1.5147	0.0007927	3.8025	0.00199	523.3249003193754	72.957	0.50883	73.282	72.986	73.494	0.32494					33	15	3	0	0	0	0.33297	1	30529	30529		23.79	2.9186	1	2139200			38266	2935	18955	19033	44360	44360					0.1126349675369056
VLFGLLREV	9	Unmodified	_VLFGLLREV_					0	0	0		ENSG00000140829|ENST00000268482|DHX38;ENST00000569935.1_1_16:72137048-72138114:+|nuORF	ENSG00000140829|ENST00000268482|DHX38	ENSG00000140829|ENST00000268482|DHX38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.7900268435478	2	523.32386	1044.63317	1.266	0.00066251	1.2925	0.00067642	2.5585	0.0013389	523.3242586579005	71.102	0.37124	72.926	72.758	73.129	1.824					29	11	3	0	0	0	0.078703	1	29835	29835		29.841	8.9694	1	7099800			38267	2935	18955	19033	44361	44361					0.1126349675369056
VLFGVETHV	9	Unmodified	_VLFGVETHV_					0	0	0		ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7768737673759	2	500.776742	999.538931	1.8639	0.00093338	1.0623	0.00053195	2.9261	0.0014653	500.777103764288	46.757	0.45401	46.757	46.536	46.99	0					29	14	3	0	0	0	0.11669	1	19531	19531		48.346	19.859	1	1085900			38268	809	18956	19034	44362	44362					0.03914357931557788
VLFGVETHV	9	Unmodified	_VLFGVETHV_					0	0	0		ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.7782165408134	2	500.776742	999.538931	2.3352	0.0011694	0.24373	0.00012206	2.5789	0.0012915	500.7767272920858	46.235	0.51178	46.564	46.391	46.903	0.32899					30	17	2	0	0	0	0.16939	1	19399	19399		48.346	19.859	1	966200			38269	809	18956	19034	44363	44363					0.03914357931557788
VLFGVETHV	9	Unmodified	_VLFGVETHV_					0	0	0		ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.7767211794853	2	500.776742	999.538931	2.6911	0.0013477	-3.3707	-0.001688	-0.67959	-0.00034032	500.7752314603543	44.734	0.37431	46.099	45.836	46.21	1.3653					26	11	3	0	0	0	0.093059	1	18743	18743		57.471	34.323	1	2971700			38270	809	18956	19034	44364	44364					0.03914357931557788
VLFGVETHV	9	Unmodified	_VLFGVETHV_					0	0	0		ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	ENSG00000066583|ENST00000173527|ISOC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7773620486259	2	500.776742	999.538931	2.0287	0.0010159	-2.6444	-0.0013242	-0.61569	-0.00030832	500.7753264634901	44.151	0.53737	46.095	45.734	46.271	1.9438					30	16	3	0	0	0	0.1109	1	18507	18507		50.855	32.72	1	2568500			38271	809	18956	19034	44365	44365					0.03914357931557788
VLFIRRTL	8	Unmodified	_VLFIRRTL_					0	0	0			REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3313171267509	2	509.332019	1016.64948	2.9173	0.0014859	-3.3506	-0.0017066	-0.43331	-0.0002207	509.3301347531373	86.654	0.2549	86.654	86.489	86.744	0					15	8	2	0	0	0	0.86202	2	36075	36075;36123		15.768	0	1	2877700	+		38272	10758	18957	19035	44366;44367	44366					0.141826227104616
VLFIRRTL	8	Unmodified	_VLFIRRTL_					0	0	0			REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3324157595634	2	509.332019	1016.64948	2.7758	0.0014138	-1.5519	-0.00079041	1.2239	0.00062338	509.33121802051215	86.19	0.44865	86.443	86.25	86.699	0.25227					27	14	3	0	0	0	0.86202	2	36017	36017;36070		15.768	0	1	2088600	+		38273	10758	18957	19035	44368;44369	44368					0.141826227104616
VLFIRRTL	8	Unmodified	_VLFIRRTL_					0	0	0			REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3321411013603	2	509.332019	1016.64948	2.8438	0.0014484	-2.6805	-0.0013653	0.16325	8.3149E-05	509.33078670729617	85.285	0.37856	86.444	86.21	86.589	1.159					25	13	3	0	0	0	0.86202	2	35769	35769;35825		15.768	0	1	4664100	+		38274	10758	18957	19035	44370;44371	44370					0.141826227104616
VLFIRRTL	8	Unmodified	_VLFIRRTL_					0	0	0			REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	REV__ENST00000474944.5_1_8:94767142-94822123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3322021365166	2	509.332019	1016.64948	2.9452	0.0015001	-1.4461	-0.00073655	1.4991	0.00076354	509.33116770278207	84.802	0.35164	86.399	86.188	86.539	1.5962					28	11	3	0	0	0	0.86202	2	35612	35507;35612		15.768	0	1	6132600	+		38275	10758	18957	19035	44372;44373	44373					0.141826227104616
VLFPEPLTW	9	Unmodified	_VLFPEPLTW_					0	0	0		ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.3050414919853	2	551.302593	1100.59063	4.1941	0.0023122	0.48551	0.00026766	4.6796	0.0025799	551.3028581539719	90.454	0.38577	91.436	91.173	91.558	0.98157					30	11	3	0	0	0	0.031324	1	38094	38094		85.357	56.275	1	2788400			38276	2923	18958	19036	44374	44374					0.04436101625447009
VLFPEPLTW	9	Unmodified	_VLFPEPLTW_					0	0	0		ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	ENSG00000140526|ENST00000352732|ABHD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.3043090701103	2	551.302593	1100.59063	4.1729	0.0023005	-0.30461	-0.00016793	3.8683	0.0021326	551.3021976516412	89.947	0.43894	91.351	91.081	91.52	1.4045					32	13	3	0	0	0	0.059546	1	37895	37895		64.236	39.562	1	2940700			38277	2923	18958	19036	44375	44375					0.04436101625447009
VLFPNLKTV	9	Unmodified	_VLFPNLKTV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	515.8195068240166	2	515.81841	1029.62227	2.0881	0.0010771	1.5974	0.00082395	3.6855	0.0019011	515.8188825003117	56.838	0.40314	56.838	56.606	57.009	0					32	13	3	0	0	0	0.010279	3	23707	23659;23707;23764		107.19	53.354	1	13087000			38278	4099	18959	19037	44376;44377;44378	44377					0.10864094379394373
VLFPNLKTV	9	Unmodified	_VLFPNLKTV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	515.8198730349541	2	515.81841	1029.62227	2.3476	0.0012109	0.7902	0.0004076	3.1378	0.0016185	515.8188454546957	56.306	0.42644	56.627	56.418	56.845	0.32103					58	14	6	0	0	0	0.023685	2	23565	23565;23615		96.367	36.293	1	15110000			38279	4099	18959	19037	44379;44380	44379					0.10864094379394373
VLFPNLKTV	9	Unmodified	_VLFPNLKTV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.8198119997978	2	515.81841	1029.62227	1.7427	0.0008989	0.5438	0.0002805	2.2865	0.0011794	515.8187120500718	55.08	0.51553	56.484	56.211	56.726	1.4048					32	17	2	0	0	0	0.0017491	3	23102	23000;23050;23102		131.27	60.134	1	50160000			38280	4099	18959	19037	44381;44382;44383	44383					0.10864094379394373
VLFPNLKTV	9	Unmodified	_VLFPNLKTV_					0	0	0		ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	ENSG00000169594|ENST00000345382|BNC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.8191406130791	2	515.81841	1029.62227	1.9403	0.0010009	-0.0013784	-7.1101E-07	1.939	0.0010002	515.8184242426627	54.572	0.49241	56.54	56.287	56.779	1.9684					31	16	2	0	0	0	0.0069529	3	22918	22815;22865;22918		114.65	60.816	1	43105000			38281	4099	18959	19037	44384;44385;44386	44386					0.10864094379394373
VLFSSPPVILL	11	Unmodified	_VLFSSPPVILL_					0	0	0		ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	592.8724243044853	2	592.8681	1183.72165	2.615	0.0015503	1.4823	0.00087883	4.0973	0.0024292	592.8688678323738	96.917	0.1908	97.022	96.941	97.132	0.105					12	5	3	0	0	0	0.024307	1	40546	40546		96.285	50.264	1	13749000			38282	4216	18960	19038	44387	44387					0.13713492273518568
VLFSSPPVILL	11	Unmodified	_VLFSSPPVILL_					0	0	0		ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.8696166872978	2	592.8681	1183.72165	3.8627	0.0022901	-0.19958	-0.00011833	3.6631	0.0021717	592.8675399460997	96.716	0.18456	97.001	96.892	97.077	0.28442					12	5	3	0	0	0	0.027505	1	40685	40685		85.272	33.004	1	9945300			38283	4216	18960	19038	44388	44388					0.13713492273518568
VLFSSPPVILL	11	Unmodified	_VLFSSPPVILL_					0	0	0		ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.8707763552666	2	592.8681	1183.72165	3.315	0.0019654	0.64781	0.00038407	3.9628	0.0023494	592.8682642444224	96.565	0.21658	96.872	96.789	97.005	0.3062					15	6	3	0	0	0	0.026909	1	40624	40624		88.904	36.635	1	6503200			38284	4216	18960	19038	44389	44389					0.13713492273518568
VLFSSPPVILL	11	Unmodified	_VLFSSPPVILL_					0	0	0		ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	ENSG00000171867|ENST00000379440|PRNP	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	592.8681	1183.72165	1.7479	0.0010363	-0.20544	-0.0001218	1.5424	0.00091446	592.867755238913	97.064	0.17999	97.064	96.956	97.136	0	0.074287	-0.00059387	NaN	96.285	17	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9615900			38285	4216	18960	19038							0.13713492273518568
VLFSVYMCY	9	Unmodified	_VLFSVYMCY_					0	0	0		ENSG00000164181|ENST00000508821|ELOVL7	ENSG00000164181|ENST00000508821|ELOVL7	ENSG00000164181|ENST00000508821|ELOVL7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	562.7607910037041	2	562.761389	1123.50822	3.2587	0.0018339	-4.0915	-0.0023025	-0.83278	-0.00046866	562.7592769880291	96.906	0.15664	97.212	97.133	97.289	0.3062					7	4	2	0	0	0	0.34572	1	40774	40774		23.148	5.0134	1	3787100			38286	3756	18961	19039	44390	44390					-0.048588797693355446
VLGDVIEV	8	Unmodified	_VLGDVIEV_					0	0	0		ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	843.4819213747978	1	843.482211	842.474934	1.9773	0.0016678	-0.33381	-0.00028156	1.6435	0.0013862	843.4814349012584	58.705	0.31868	58.705	58.559	58.877	0					15	9	2	0	0	0	0.59872	2	24481	24481;24533		40.449	0	1	999960			38287	1683	18962	19040	44391;44392	44391					0.04739577774614645
VLGDVIEV	8	Unmodified	_VLGDVIEV_					0	0	0		ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	843.4821655154228	1	843.482211	842.474934	1.032	0.00087045	-0.81502	-0.00068745	0.21696	0.000183	843.4813487311225	57.154	0.31808	58.568	58.4	58.718	1.4145					20	10	3	0	0	0	0.15094	2	23948	23948;23999		86.121	7.6766	1	4437900			38288	1683	18962	19040	44393;44394	44393					0.04739577774614645
VLGDVIEV	8	Unmodified	_VLGDVIEV_					0	0	0		ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	843.4831420779228	1	843.482211	842.474934	0.69604	0.0005871	0.46832	0.00039502	1.1644	0.00098211	843.4826681833182	56.624	0.3255	58.592	58.425	58.751	1.9684					21	10	3	0	0	0	0.067734	2	23732	23732;23781		98.807	9.3804	1	3857600			38289	1683	18962	19040	44395;44396	44395					0.04739577774614645
VLGDVIEV	8	Unmodified	_VLGDVIEV_					0	0	0		ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	ENSG00000109846|ENST00000650687|CRYAB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	843.482211	842.474934	2.4706	0.0020839	-0.95253	-0.00080344	1.518	0.0012804	843.4811169439768	58.343	0.31546	58.666	58.46	58.776	0.32298	0.033147	-0.00052369	NaN	98.807	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	951120			38290	1683	18962	19040							0.04739577774614645
VLGEFLKEI	9	Unmodified	_VLGEFLKEI_					0	0	0		ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.3088256716728	2	524.307875	1046.6012	2.0401	0.0010696	0.61549	0.00032271	2.6556	0.0013924	524.3082554134144	65.057	0.5052	65.057	64.753	65.258	0					26	15	2	0	0	0	0.099302	1	27092	27092		49.554	11.58	1	2573100			38291	1413	18963	19041	44397	44397					0.07976084279903262
VLGEFLKEI	9	Unmodified	_VLGEFLKEI_					0	0	0		ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.3093139529228	2	524.307875	1046.6012	2.0846	0.001093	0.77091	0.00040419	2.8555	0.0014972	524.3083342230177	64.508	0.41734	64.837	64.562	64.979	0.32899					22	12	2	0	0	0	0.099302	2	26999	26999;27052		49.554	15.452	1	2399500			38292	1413	18963	19041	44398;44399	44398					0.07976084279903262
VLGEFLKEI	9	Unmodified	_VLGEFLKEI_					0	0	0		ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3095580935478	2	524.307875	1046.6012	2.8374	0.0014877	0.43346	0.00022727	3.2709	0.0017149	524.3079079836015	63.261	0.56208	64.675	64.344	64.906	1.4134					27	17	2	0	0	0	0.071837	2	26498	26498;26549		59.368	17.527	1	7860800			38293	1413	18963	19041	44400;44401	44400					0.07976084279903262
VLGEFLKEI	9	Unmodified	_VLGEFLKEI_					0	0	0		ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	ENSG00000103043|ENST00000261776|VAC14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3092529177666	2	524.307875	1046.6012	2.6962	0.0014137	1.3144	0.00068914	4.0106	0.0021028	524.3080856594454	62.635	0.58969	64.579	64.315	64.905	1.9444					43	18	4	0	0	0	0.026411	2	26315	26262;26315		93.166	38.392	1	10358000			38294	1413	18963	19041	44402;44403	44403					0.07976084279903262
VLGEFLQLPW	10	Unmodified	_VLGEFLQLPW_					0	0	0		ENST00000472723.1_1_9:130495774-130495906:-|nuORF	ENST00000472723.1_1_9:130495774-130495906:-|nuORF	ENST00000472723.1_1_9:130495774-130495906:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	601.3367797732353	2	601.334424	1200.6543	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.713	1	65.713	65.213	66.213	0								0	0	0	0.66008	1	27381	27381		4.3292	0	1				38295	6759	18964	19042	44404	44404					0.06199462062568273
VLGGKAFLEHL	11	Unmodified	_VLGGKAFLEHL_					0	0	0		ENST00000590143.5_1_18:12662154-12700964:-|nuORF;ENSG00000101624|ENST00000262127|CEP76	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	395.2334777712822	3	395.232641	1182.67609	0.26984	0.00010665	0.82372	0.00032556	1.0936	0.00043221	395.23288403678487	46.595	0.36736	46.595	46.387	46.755	0					19	11	2	0	0	0	0.50248	1	19464	19464		23.964	11.789	1	1012100			38296	1361	18965	19043	44405	44405					0.09206266811111163
VLGGKAFLEHL	11	Unmodified	_VLGGKAFLEHL_					0	0	0		ENST00000590143.5_1_18:12662154-12700964:-|nuORF;ENSG00000101624|ENST00000262127|CEP76	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	395.2325012087822	3	395.232641	1182.67609	1.808	0.00071457	-1.2278	-0.00048528	0.58012	0.00022928	395.23170070970025	46.004	0.4164	46.333	46.144	46.561	0.32899					25	13	3	0	0	0	0.50248	1	19279	19279		23.964	11.723	1	1519600			38297	1361	18965	19043	44406	44406					0.09206266811111163
VLGGKAFLEHL	11	Unmodified	_VLGGKAFLEHL_					0	0	0		ENST00000590143.5_1_18:12662154-12700964:-|nuORF;ENSG00000101624|ENST00000262127|CEP76	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	395.2335998415947	3	395.232641	1182.67609	1.8866	0.00074564	1.4483	0.0005724	3.3349	0.001318	395.2328669728778	44.401	0.44898	45.766	45.451	45.9	1.3653					20	13	2	0	0	0	0.16041	1	18588	18588		44.945	25.319	1	2674900			38298	1361	18965	19043	44407	44407					0.09206266811111163
VLGGKAFLEHL	11	Unmodified	_VLGGKAFLEHL_					0	0	0		ENST00000590143.5_1_18:12662154-12700964:-|nuORF;ENSG00000101624|ENST00000262127|CEP76	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	ENST00000590143.5_1_18:12662154-12700964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.2348815798759	3	395.232641	1182.67609	1.9591	0.00077429	2.2285	0.00088076	4.1875	0.0016551	395.2336179096706	43.681	0.43071	45.624	45.368	45.799	1.9438					27	13	3	0	0	0	0.21888	2	18302	18302;18349		38.559	21.993	1	1497900			38299	1361	18965	19043	44408;44409	44408					0.09206266811111163
VLGGTRRK	8	Unmodified	_VLGGTRRK_					0	0	0			REV__ENST00000490691.1_1_3:4345308-4357963:+|nuORF	REV__ENST00000490691.1_1_3:4345308-4357963:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	443.7837707400322	2	443.782693	885.550834	2.0863	0.00092584	1.5093	0.00066978	3.5955	0.0015956	443.7832051736293	84.22	0.43458	84.22	83.996	84.43	0					34	13	4	0	0	0	0.89176	1	35091	35091		0.79363	0	1	4787100	+		38300	13424	18966	19044	44410	44410					0.10348019465413927
VLGIVVGV	8	Unmodified	_VLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	755.5020629763603	1	755.502552	754.495276	1.5932	0.0012036	-0.77099	-0.00058248	0.82219	0.00062116	755.5023231991485	68.08	0.34782	68.403	68.25	68.597	0.32269					15	10	2	0	0	0	0.5848	1	28519	28519		41.817	0	1	373220			38301	2249	18967	19045	44411	44411					0.10820793225093439
VLGIVVGV	8	Unmodified	_VLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	755.502552	754.495276	1.7435	0.0013172	-0.48556	-0.00036684	1.2579	0.00095036	755.501754217191	68.634	0.28369	68.634	68.453	68.737	0	0.20564	-0.00037705	NaN	41.817	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	404610			38302	2249	18967	19045							0.10820793225093439
VLGIVVGV	8	Unmodified	_VLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	755.502552	754.495276	1.1219	0.00084758	1.0447	0.00078928	2.1666	0.0016369	755.5034579525319	66.937	0.37503	68.326	68.121	68.496	1.3888	-0.10308	0.00077907	NaN	41.817	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780500			38303	2249	18967	19045							0.10820793225093439
VLGIVVGV	8	Unmodified	_VLGIVVGV_					0	0	0		nc|ENSG00000125107|A5YKK6-3|CNOT1;nc|ENSG00000125107|A5YKK6-2|CNOT1;ENSG00000125107|ENST00000317147|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	nc|ENSG00000125107|A5YKK6-3|CNOT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	755.502552	754.495276	1.1075	0.00083675	2.0446	0.0015447	3.1521	0.0023814	755.5046234137112	66.463	0.31752	68.352	68.15	68.467	1.8889	-0.076767	0.0015345	NaN	41.817	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	790700			38304	2249	18967	19045							0.10820793225093439
VLGKPLAI	8	Unmodified	_VLGKPLAI_					0	0	0		ENST00000589290.1_1_19:13875402-13879305:+|nuORF;ENST00000588526.5_1_19:13876871-13879305:+|nuORF	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	405.2735778689384	2	405.776014	809.537475	0.64813	0.000263	-2.2137	-0.00089827	-1.5656	-0.00063528	405.7750600397182	28.484	0.87212	30.259	30.002	30.874	1.7754					39	28	2	0	0	0	2.3239	1	12023	12023		0.79363	0	1	6100000			38305	7474	18968	19046	44412	44412					0.12508768633449563
VLGLGTLVLL	10	Unmodified	_VLGLGTLVLL_					0	0	0		ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3365051150322	2	499.336436	996.658318	0.75395	0.00037647	-2.0164	-0.0010069	-1.2625	-0.0006304	499.3357145851269	51.491	0.32931	52.885	52.68	53.009	1.3938					16	10	2	0	0	0	0.15278	1	21542	21542		54.774	0	1	1914200			38306	5066	18969	19047	44413	44413					0.15985551556275368
VLGLGTLVLL	10	Unmodified	_VLGLGTLVLL_					0	0	0		ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	ENSG00000198678|ENST00000328207|OR5BS1P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3373290896416	2	499.336436	996.658318	-0.24392	-0.0001218	-0.08191	-4.0901E-05	-0.32583	-0.0001627	499.3366403581164	50.831	0.27586	52.807	52.667	52.942	1.9753					17	8	3	0	0	0	0.06058	1	21307	21307		74.423	10.186	1	2189200			38307	5066	18969	19047	44414	44414					0.15985551556275368
VLGLRTVLL	9	Unmodified	_VLGLRTVLL_					0	0	0		ENST00000486274.5_1_3:99980056-99980248:+|nuORF	ENST00000486274.5_1_3:99980056-99980248:+|nuORF	ENST00000486274.5_1_3:99980056-99980248:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	492.3344604372978	2	492.334227	982.653902	1.4614	0.00071951	0.1696	8.3501E-05	1.631	0.00080301	492.33432694732124	72.381	0.35104	72.381	72.206	72.557	0					17	10	2	0	0	0	0.42305	1	30135	30135		19.257	1.1106	1	1035700			38308	6862	18970	19048	44415	44415					0.1618808713335511
VLGLVGVV	8	Unmodified	_VLGLVGVV_					0	0	0			REV__tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	REV__tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	755.5039550662041	1	755.502552	754.495276	1.7435	0.0013172	-0.48556	-0.00036684	1.2579	0.00095036	755.501754217191	68.634	0.28369	68.634	68.453	68.737	0					14	8	2	0	0	0	0.76629	1	28549	28549		24.21	7.1234	1	404610	+		38309	15522	18971	19049	44416	44416					0.10820793225093439
VLGRAAQR	8	Unmodified	_VLGRAAQR_					0	0	0		ENST00000510885.2_1_4:57459582-57460608:+|nuORF;GLDC|p.L750Tfs*20|1|0.37|ENSG00000178445|chr9:6554727-6554736|GAAGATTTAG/-|frameshift_variant;ENSG00000178445|ENST00000321612|GLDC	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7675353884697	2	435.767043	869.519533	2.0605	0.00089791	-0.57002	-0.00024839	1.4905	0.00064951	435.76666468365687	85.835	0.43617	85.835	85.572	86.008	0					19	13	2	0	0	0	0.88663	1	35774	35774		4.756	0	1	1264300			38310	4485	18972	19050	44417	44417					0.07955446431321889
VLGRAAQR	8	Unmodified	_VLGRAAQR_					0	0	0		ENST00000510885.2_1_4:57459582-57460608:+|nuORF;GLDC|p.L750Tfs*20|1|0.37|ENSG00000178445|chr9:6554727-6554736|GAAGATTTAG/-|frameshift_variant;ENSG00000178445|ENST00000321612|GLDC	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7664367556572	2	435.767043	869.519533	2.1958	0.00095685	-0.072719	-3.1688E-05	2.1231	0.00092516	435.76667913479605	69.121	1.0362	70.486	69.966	71.002	1.3657					51	33	2	0	0	0	0.89051	1	29103	29103		2.3027	0	1	1790000			38311	4485	18972	19050	44418	44418					0.07955446431321889
VLGRAAQR	8	Unmodified	_VLGRAAQR_					0	0	0		ENST00000510885.2_1_4:57459582-57460608:+|nuORF;GLDC|p.L750Tfs*20|1|0.37|ENSG00000178445|chr9:6554727-6554736|GAAGATTTAG/-|frameshift_variant;ENSG00000178445|ENST00000321612|GLDC	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	ENST00000510885.2_1_4:57459582-57460608:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	435.767043	869.519533	2.9817	0.0012993	1.1405	0.000497	4.1222	0.0017963	435.7667951305053	85.583	0.40485	85.835	85.632	86.037	0.25227	2.2574E-05	0.00099646	NaN	4.756	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1610900			38312	4485	18972	19050							0.07955446431321889
VLGTVPTAK	9	Unmodified	_VLGTVPTAK_					0	0	0		ENST00000471198.1_1_3:167344976-167371234:-|nuORF	ENST00000471198.1_1_3:167344976-167371234:-|nuORF	ENST00000471198.1_1_3:167344976-167371234:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.2739440798759	2	443.273835	884.533118	1.7872	0.00079222	-2.3195	-0.0010282	-0.53231	-0.00023596	443.2726917724099	67.542	0.46591	69.412	69.208	69.674	1.87					36	14	4	0	0	0	0.77526	1	28328	28328		4.3292	0	1	6946000			38313	6737	18973	19051	44419	44419					0.08623259419891838
VLGVIWGV	8	Unmodified	_VLGVIWGV_					0	0	0		ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;ENSG00000101084|ENST00000344795|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000118707|Q9GZN2-2|TGIF2	ENST00000491113.1_1_20:35234354-35236222:+|nuORF	ENST00000491113.1_1_20:35234354-35236222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	842.5145141482353	1	842.513451	841.506175	2.0254	0.0017065	1.7199	0.001449	3.7453	0.0031555	842.5158013076402	81.032	0.31052	81.322	81.121	81.431	0.29056					14	9	2	0	0	0	0.43282	1	33861	33861		52.334	10.517	1	632950			38314	1319	18974	19052	44420	44420					0.07908195599372903
VLGVIWGV	8	Unmodified	_VLGVIWGV_					0	0	0		ENST00000491113.1_1_20:35234354-35236222:+|nuORF;nc|ENSG00000101084|Q9BUV8-4|RAB5IF;nc|ENSG00000101084|Q9BUV8-3|RAB5IF;ENSG00000101084|ENST00000344795|RAB5IF;nc|ENSG00000101084|Q9BUV8|RAB5IF;nc|ENSG00000101084|Q9BUV8-5|RAB5IF;nc|ENSG00000118707|Q9GZN2-2|TGIF2	ENST00000491113.1_1_20:35234354-35236222:+|nuORF	ENST00000491113.1_1_20:35234354-35236222:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	842.5148193240166	1	842.513451	841.506175	2.4276	0.0020453	-0.7979	-0.00067224	1.6297	0.0013731	842.5131456910008	79.992	0.3391	81.243	81.078	81.417	1.2512					16	10	2	0	0	0	0.5848	1	33590	33590		41.817	9.3636	1	962220			38315	1319	18974	19052	44421	44421					0.07908195599372903
VLGWVQPSL	9	Unmodified	_VLGWVQPSL_					0	0	0		ENSG00000129538|ENST00000397967|RNASE1;RNASE1|p.S50Kfs*7|1|0.04|ENSG00000129538|chr14:20801920-20801921|-/CGTT|frameshift_variant	ENSG00000129538|ENST00000397967|RNASE1	ENSG00000129538|ENST00000397967|RNASE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7895385622978	2	499.78711	997.559667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.63	1	47.005	46.505	47.505	1.3751								0	0	0	0.27791	1	19114	19114		20.454	4.6064	1				38316	2407	18975	19053	44422	44422					0.06078948311221666
VLHDEMWN	8	Unmodified	_VLHDEMWN_					0	0	0		tr|A0A7D6W3D8|A0A7D6W3D8_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09460PE=4SV=1	tr|A0A7D6W3D8|A0A7D6W3D8_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09460PE=4SV=1	tr|A0A7D6W3D8|A0A7D6W3D8_9CLOTHNHendonucleaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09460PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.2370483279228	2	522.234384	1042.45422	2.3046	0.0012036	1.282	0.00066951	3.5866	0.0018731	522.7364468788397	81.931	0.33591	81.931	81.763	82.099	0					18	10	2	0	0	0	0.88958	1	34088	34088		2.8892	0	1	970560			38317	17044	18976	19054	44423	44423					-0.06531335876684352
VLHHIRYRNWR	11	Unmodified	_VLHHIRYRNWR_					0	0	0		ENSG00000158258|ENST00000458420|CLSTN2	ENSG00000158258|ENST00000458420|CLSTN2	ENSG00000158258|ENST00000458420|CLSTN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6260253787041	3	517.291887	1548.85383	2.2209	0.0011489	-1.2276	-0.00063501	0.99337	0.00051386	517.6252602505027	60.659	4.0727	60.987	59.651	63.724	0.32809					285	130	3	0	0	0	1.0362	1	26381	26381		1.3296	0	1	2891500			38318	3496	18977	19055	44424	44424					0.10135954853694784
VLHHIRYRNWR	11	Unmodified	_VLHHIRYRNWR_					0	0	0		ENSG00000158258|ENST00000458420|CLSTN2	ENSG00000158258|ENST00000458420|CLSTN2	ENSG00000158258|ENST00000458420|CLSTN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.2891113162041	3	517.291887	1548.85383	1.1848	0.00061288	-1.8359	-0.00094972	-0.65117	-0.00033685	517.2920179057138	52.469	1.7175	53.866	53.012	54.729	1.3966					114	57	3	0	0	0	0.14606	1	22318	22318		0.50596	0	1	3126000			38319	3496	18977	19055	44425	44425					0.10135954853694784
VLHRKRKK	8	Unmodified	_VLHRKRKK_					0	0	0			REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	REV__nc|ENSG00000177910|B4DYI2|SPATA31C2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0700561404228	3	355.576965	1063.70907	-1.8934	-0.00067324	-2.8412	-0.0010103	-4.7345	-0.0016835	355.9101740463054	21.798	0.21669	21.798	21.749	21.966	0					8	6	2	0	0	0	2.3239	1	9085	9085		0	0	1	390910	+		38320	14495	18978	19056	44426	44426					0.17975938444510575
VLHRRRGP	8	Unmodified	_VLHRRRGP_					0	0	0			REV__nc|ENSG00000100836|Q86U42-2|PABPN1	REV__nc|ENSG00000100836|Q86U42-2|PABPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.8060790896416	2	495.807034	989.599515	2.932	0.0014537	-2.8416	-0.0014089	0.090379	4.4811E-05	495.8050022065136	73.477	0.64846	73.802	73.553	74.201	0.32494					39	20	3	0	0	0	0.89178	1	30802	30802		0.69038	0	1	1775600	+		38321	9008	18979	19057	44427	44427					0.10429932825172727
VLHSISFVV	9	Unmodified	_VLHSISFVV_					0	0	0		nc|ENSG00000140798|Q96J65-4|ABCC12;nc|ENSG00000140798|Q96J65-5|ABCC12;nc|ENSG00000140798|Q96J65-3|ABCC12;nc|ENSG00000140798|Q96J65-2|ABCC12;nc|ENSG00000140798|Q96J65|ABCC12;ENSG00000140798|ENST00000311303|ABCC12	nc|ENSG00000140798|Q96J65-4|ABCC12	nc|ENSG00000140798|Q96J65-4|ABCC12	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.7953063845634	2	500.794935	999.575317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.851	1	55.821	55.321	56.321	1.9697								0	0	0	0.10193	1	22561	22561		34.102	0	1				38322	2934	18980	19058	44428	44428					0.07551234828281395
VLHVAIAA	8	Unmodified	_VLHVAIAA_					0	0	0			REV__ENSG00000101544|ENST00000262198|ADNP2	REV__ENSG00000101544|ENST00000262198|ADNP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	793.4953491091728	1	793.49305	792.485774	2.8653	0.0022736	-0.17934	-0.00014231	2.686	0.0021313	793.4928929022097	107.73	0.24008	107.89	107.77	108.01	0.15795					21	12	2	0	0	0	0.89198	1	46391	46391		0	0	1	45753000	+		38323	9042	18981	19059	44429	44429					0.08123024939538936
VLIAKQSPPIV	11	Unmodified	_VLIAKQSPPIV_					0	0	0		ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	388.9164611697197	3	388.916541	1163.72779	2.6066	0.0010138	-2.3369	-0.00090885	0.26972	0.0001049	388.9151541817096	89.061	1.0293	89.284	88.778	89.807	0.2236					64	31	3	0	0	0	1.0388	1	37328	37328		0.50596	0.10524	1	1539900			38324	1869	18982	19060	44430	44430					0.15248010505024467
VLIAKQSPPIV	11	Unmodified	_VLIAKQSPPIV_					0	0	0		ENST00000506102.5_1_3:125725861-125741959:-|nuORF;ENST00000512557.5_1_3:125725252-125741959:-|nuORF;nc|ENSG00000114544|Q96GZ6-8|SLC41A3;nc|ENSG00000114544|Q96GZ6-6|SLC41A3;nc|ENSG00000114544|Q96GZ6-7|SLC41A3;nc|ENSG00000114544|Q96GZ6-4|SLC41A3;nc|ENSG00000114544|Q96GZ6-3|SLC41A3;nc|ENSG00000114544|Q96GZ6-5|SLC41A3;ENSG00000114544|ENST00000360370|SLC41A3;nc|ENSG00000114544|Q96GZ6-2|SLC41A3;nc|ENSG00000114544|Q96GZ6|SLC41A3	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	ENST00000506102.5_1_3:125725861-125741959:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1532470583916	3	388.916541	1163.72779	4.4592	0.0017342	-2.1958	-0.00085399	2.2633	0.00088025	389.2506021704636	87.381	1.0689	88.876	88.456	89.525	1.4953					54	33	2	0	0	0	0.14606	1	36967	36967		0.094841	0	1	1335500			38325	1869	18982	19060	44431	44431					0.15248010505024467
VLIANLEKL	9	Unmodified	_VLIANLEKL_					0	0	0		ENSG00000203995|ENST00000371528|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.2697631716728	2	506.823692	1011.63283	1.8557	0.00094052	-2.0479	-0.0010379	-0.19222	-9.7421E-05	506.822447209261	54.197	0.22154	56.166	56.001	56.223	1.9684					10	6	2	0	0	0	0.087598	1	22678	22678		31.268	3.6395	1	1034300			38326	5120	18983	19061	44432	44432					0.1274807703384795
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.7920715212822	2	501.789515	1001.56448	3.1643	0.0015878	3.195	0.0016032	6.3592	0.003191	501.790777003981	74.524	0.24838	74.849	74.709	74.958	0.32464					12	7	2	0	0	0	0.44535	1	31180	31180		18.135	1.1927	1	1141400			38327	2654	18984	19062	44433	44433					0.06375787663318988
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1002.575061023235	1	1002.57175	1001.56448	4.0355	0.0040459	0.46045	0.00046163	4.4959	0.0045075	1002.5722379584178	73.601	0.31419	74.919	74.748	75.062	1.318					15	9	2	0	0	0	0.051699	1	30907	30907		67.344	3.1075	1	2515800			38328	2654	18984	19062	44434	44434					0.06375787663318988
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1002.57175	1001.56448	1.8523	0.0018571	-1.8039	-0.0018085	0.048448	4.8573E-05	1002.569987604326	74.889	0.28169	74.889	74.777	75.059	0	-0.028413	-0.0011157	NaN	67.344	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	751950			38329	2654	18984	19062							0.06375787663318988
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	501.789515	1001.56448	1.8123	0.0009094	0.61366	0.00030793	2.426	0.0012173	501.7898692717539	74.926	0.31384	74.926	74.745	75.059	0	0.038713	-0.00080716	NaN	18.135	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	527560			38330	2654	18984	19062							0.06375787663318988
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1002.57175	1001.56448	2.8608	0.0028682	0.70236	0.00070416	3.5632	0.0035724	1002.572608207308	74.595	0.24934	74.92	74.74	74.989	0.32463	0.0023576	0.0013969	NaN	67.344	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	637110			38331	2654	18984	19062							0.06375787663318988
VLIDDLTTL	9	Unmodified	_VLIDDLTTL_					0	0	0		ENST00000370308.8_1_6:74189644-74210455:+|nuORF;nc|ENSG00000135297|Q9Y2Z2-2|MTO1;nc|ENSG00000135297|Q9Y2Z2-5|MTO1;ENSG00000135297|ENST00000498286|MTO1;nc|ENSG00000135297|Q9Y2Z2|MTO1;nc|ENSG00000135297|Q9Y2Z2-6|MTO1	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	ENST00000370308.8_1_6:74189644-74210455:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1002.57175	1001.56448	2.8907	0.0028981	-0.4994	-0.00050068	2.3913	0.0023974	1002.5723194155574	73.132	0.3802	74.942	74.703	75.083	1.8101	0.024517	0.00019208	NaN	67.344	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2143100			38332	2654	18984	19062							0.06375787663318988
VLIDPQWVL	9	Unmodified	_VLIDPQWVL_					0	0	0		ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	ENSG00000113088|ENST00000231009|GZMK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.8190185427666	2	541.815867	1081.61718	4.1999	0.0022756	0.29791	0.00016141	4.4978	0.002437	541.8163380966635	93.338	0.29125	94.21	94.031	94.322	0.87176					15	8	3	0	0	0	0.64949	1	39280	39280		9.3474	0	1	1691100			38333	1805	18985	19063	44435	44435					0.07963790516805602
VLIDYQRNV	9	Unmodified	_VLIDYQRNV_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3117553591728	2	560.31148	1118.60841	0.93649	0.00052473	2.0023	0.0011219	2.9388	0.0016467	560.312350910076	33.313	0.18674	33.313	33.204	33.39	0					9	5	2	0	0	0	0.63129	1	13953	13953		10.074	1.3285	1	649340			38334	1035	18986	19064	44436	44436					0.05384816880314247
VLIDYQRNV	9	Unmodified	_VLIDYQRNV_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3116943240166	2	560.31148	1118.60841	0.70715	0.00039623	0.49022	0.00027468	1.1974	0.0006709	560.3114935798395	31.692	0.2751	32.973	32.835	33.11	1.2813					14	8	2	0	0	0	0.18809	2	13288	13288;13340		34.402	8.0724	1	1884800			38335	1035	18986	19064	44437;44438	44437					0.05384816880314247
VLIDYQRNV	9	Unmodified	_VLIDYQRNV_					0	0	0		ENSG00000082898|ENST00000401558|XPO1;ENST00000428210.5_1_2:61705957-61719950:-|nuORF;ENST00000461407.5_1_2:61712881-61715780:-|nuORF;ENST00000492182.5_1_2:61710065-61713073:-|nuORF	ENSG00000082898|ENST00000401558|XPO1	ENSG00000082898|ENST00000401558|XPO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3130370974541	2	560.31148	1118.60841	0.83907	0.00047014	0.20057	0.00011238	1.0396	0.00058252	560.3115569731931	31.187	0.2893	33.011	32.865	33.155	1.8246					14	9	2	0	0	0	0.37774	2	13051	13051;13100		21.537	9.2963	1	1812600			38336	1035	18986	19064	44439;44440	44439					0.05384816880314247
VLIETLVTL	9	Unmodified	_VLIETLVTL_					0	0	0		ENST00000606061.1_1_20:32881868-32891076:-|nuORF;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY;USP6NL-AHCY|1|fusion;ENSG00000101444|ENST00000217426|AHCY	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.8190185427666	2	500.818076	999.621598	2.5992	0.0013017	-1.5974	-0.0008	1.0018	0.00050174	500.8171414792423	86.654	0.38915	86.654	86.427	86.816	0					30	13	3	0	0	0	0.028763	2	36109	36060;36109		89.427	9.5345	1	7991200			38337	1350	18987	19065	44441;44442	44442					0.12177254939717841
VLIETLVTL	9	Unmodified	_VLIETLVTL_					0	0	0		ENST00000606061.1_1_20:32881868-32891076:-|nuORF;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY;USP6NL-AHCY|1|fusion;ENSG00000101444|ENST00000217426|AHCY	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.8190490603447	2	500.818076	999.621598	3.1509	0.001578	-1.1407	-0.00057127	2.0102	0.0010068	500.8173662170471	86.18	0.506	86.432	86.193	86.699	0.25227					39	16	3	0	0	0	0.028763	2	36024	35978;36024		89.427	11.481	1	4914000			38338	1350	18987	19065	44443;44444	44444					0.12177254939717841
VLIETLVTL	9	Unmodified	_VLIETLVTL_					0	0	0		ENST00000606061.1_1_20:32881868-32891076:-|nuORF;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY;USP6NL-AHCY|1|fusion;ENSG00000101444|ENST00000217426|AHCY	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8187438845634	2	500.818076	999.621598	2.56	0.0012821	-1.1401	-0.00057096	1.4199	0.00071112	500.817552812774	85.306	0.45019	86.465	86.21	86.661	1.159					38	16	3	0	0	0	0.028763	1	35845	35845		89.427	0	1	15319000			38339	1350	18987	19065	44445	44445					0.12177254939717841
VLIETLVTL	9	Unmodified	_VLIETLVTL_					0	0	0		ENST00000606061.1_1_20:32881868-32891076:-|nuORF;ENST00000480653.5_1_20:32878355-32891076:-|nuORF;nc|ENSG00000101444|P23526-2|AHCY;USP6NL-AHCY|1|fusion;ENSG00000101444|ENST00000217426|AHCY	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	ENST00000606061.1_1_20:32881868-32891076:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8199035525322	2	500.818076	999.621598	2.5031	0.0012536	-0.53984	-0.00027036	1.9633	0.00098325	500.81772424855075	84.85	0.47401	86.446	86.158	86.632	1.5962					43	16	4	0	0	0	0.028763	2	35566	35566;35626		89.427	4.0701	1	15786000			38340	1350	18987	19065	44446;44447	44446					0.12177254939717841
VLIFLLYNLLI	11	Unmodified	_VLIFLLYNLLI_					0	0	0			REV__tr|A0A553SSF3|A0A553SSF3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_03015PE=4SV=1	REV__tr|A0A553SSF3|A0A553SSF3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_03015PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	445.1207458376884	3	445.287975	1332.8421	2.2092	0.00098373	0.23592	0.00010505	2.4451	0.0010888	445.2880612249456	51.882	0.89655	52.207	51.943	52.84	0.32553					50	28	2	0	0	0	0.14606	1	21990	21990		0.50596	0	1	7674100	+		38341	15204	18988	19066	44448	44448					0.18898900267140561
VLIGEFLEKV	10	Unmodified	_VLIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.8451415896416	2	573.842082	1145.66961	1.596	0.00091587	0.024564	1.4096E-05	1.6206	0.00092997	573.8424921300378	73.37	0.24308	73.37	73.248	73.491	0					13	7	3	0	0	0	0.60754	1	30549	30549		22.658	6.509	1	615400			38342	7842	18989	19067	44449	44449					0.10260328859726542
VLIGEFLEKV	10	Unmodified	_VLIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	573.842082	1145.66961	1.9649	0.0011275	4.3642	0.0025044	6.3291	0.0036319	573.844177494547	72.821	0.25853	73.146	73.018	73.276	0.32494	0.044389	0.0010359	NaN	22.658	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807140			38343	7842	18989	19067							0.10260328859726542
VLIGEFLEKV	10	Unmodified	_VLIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	573.842082	1145.66961	1.7243	0.00098947	4.2655	0.0024477	5.9898	0.0034372	574.3461362444621	71.624	0.40179	72.966	72.689	73.091	1.3415	-0.13614	0.00092264	NaN	22.658	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1803400			38344	7842	18989	19067							0.10260328859726542
VLIGEFLEKV	10	Unmodified	_VLIGEFLEKV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT;ENSG00000101654|ENST00000383314|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	573.842082	1145.66961	1.2523	0.00071861	5.169	0.0029662	6.4213	0.0036848	574.3461049106022	71.102	0.31076	72.926	72.787	73.098	1.824	-0.17636	0.0019595	NaN	22.658	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1852300			38345	7842	18989	19067							0.10260328859726542
VLIGIIALK	9	Unmodified	_VLIGIIALK_					0	0	0		tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	tr|A0A553SMN5|A0A553SMN5_NIACIDUF475domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22865PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	470.3356506228447	2	470.333696	938.652839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.574	1	93.719	93.219	94.219	0.14493								0	0	0	0.42693	1	39171	39171		0	0	1				38346	16382	18990	19068	44450	44450					0.18105872764442665
VLIKKLKAF	9	Unmodified	_VLIKKLKAF_					0	0	0			REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	REV__CASP8AP2|p.E1578Dfs*44|1|0.06|ENSG00000118412|chr6:89868023-89868024|-/CCCTGTTC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	530.3696166872978	2	530.36807	1058.72159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.618	1	98.845	98.345	99.345	0.22776								0	0	0	0.42693	1	41519	41519		0.6015	0.076735	1		+		38347	8180	18991	19069	44451	44451					0.19457537064158714
VLILLHCLL	9	Unmodified	_VLILLHCLL_					0	0	0			REV__nc|ENSG00000156500|Q6P4D5|PABIR3	REV__nc|ENSG00000156500|Q6P4D5|PABIR3	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2231323122978	3	346.224429	1035.65146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.22	1	74.22	73.72	74.72	0								0	0	0	0.42693	1	30904	30904		0.26902	0	1		+		38348	14467	18992	19070	44452	44452					0.13505915404039115
VLILWLQPDW	10	Unmodified	_VLILWLQPDW_					0	0	0		nc|ENSG00000211810|P04437|TRAV29DV5	nc|ENSG00000211810|P04437|TRAV29DV5	nc|ENSG00000211810|P04437|TRAV29DV5	MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8649780154228	2	641.863349	1281.71214	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.026	1	97.311	96.811	97.811	0.28442								0	0	0	0.66008	1	40824	40824		4.3292	0.73274	1				38349	7991	18993	19071	44453	44453					0.0825572398798613
VLIMAILYL	9	Unmodified	_VLIMAILYL_					0	0	0		tr|A0A553SRE0|A0A553SRE0_NIACIDUF1656domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00910PE=4SV=1	tr|A0A553SRE0|A0A553SRE0_NIACIDUF1656domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00910PE=4SV=1	tr|A0A553SRE0|A0A553SRE0_NIACIDUF1656domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_00910PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.8306762576103	2	524.827389	1047.64023	2.7608	0.001449	-0.087681	-4.6018E-05	2.6732	0.0014029	524.8273818981037	82.672	0.61899	84.342	84.049	84.668	1.67					74	19	5	0	0	0	0.75267	1	34598	34598		5.2307	0	1	113350000			38350	16551	18994	19072	44454	44454					0.11831093309911012
VLIPKLPQL	9	Unmodified	_VLIPKLPQL_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.8449279665947	2	510.844428	1019.6743	1.8343	0.00093705	-0.87253	-0.00044573	0.96179	0.00049133	510.84400548091895	69.094	0.80914	69.094	68.549	69.358	0					77	25	4	0	0	0	0.013238	5	28724	28625;28674;28724;28777;28830		104.8	62.705	1	12541000			38351	4227	18995	19073	44455;44456;44457;44458;44459	44457					0.1652525779318239
VLIPKLPQL	9	Unmodified	_VLIPKLPQL_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.8452941775322	2	510.844428	1019.6743	1.698	0.00086739	-0.019436	-9.9288E-06	1.6785	0.00085746	510.8444737877838	68.498	0.81238	68.82	68.313	69.125	0.32224					80	25	4	0	0	0	0.018723	5	28653	28553;28603;28653;28693;28748		100.37	60.414	1	14395000			38352	4227	18995	19073	44460;44461;44462;44463;44464	44462					0.1652525779318239
VLIPKLPQL	9	Unmodified	_VLIPKLPQL_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8458740115166	2	510.844428	1019.6743	2.1443	0.0010954	-1.0757	-0.00054951	1.0686	0.0005459	510.843930095453	67.239	0.92982	68.628	68.027	68.957	1.3888					97	29	4	0	0	0	0.018723	6	28109	28059;28109;28158;28210;28249;28289		100.37	49.516	1	39733000			38353	4227	18995	19073	44465;44466;44467;44468;44469;44470	44466					0.1652525779318239
VLIPKLPQL	9	Unmodified	_VLIPKLPQL_					0	0	0		nc|ENSG00000172057|Q8N138-4|ORMDL3;ENSG00000172057|ENST00000304046|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	nc|ENSG00000172057|Q8N138-4|ORMDL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8455078005791	2	510.844428	1019.6743	1.7889	0.00091382	-1.1415	-0.00058314	0.64732	0.00033068	510.84390548930946	66.715	0.89813	68.604	68.025	68.923	1.8889					91	28	4	0	0	0	0.006164	6	27899	27850;27899;27948;27988;28040;28079		117.6	73.192	1	36571000			38354	4227	18995	19073	44471;44472;44473;44474;44475;44476	44472					0.1652525779318239
VLISLVFGFL	10	Unmodified	_VLISLVFGFL_					0	0	0		tr|A0A7D6VUQ6|A0A7D6VUQ6_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08010PE=4SV=1	tr|A0A7D6VUQ6|A0A7D6VUQ6_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08010PE=4SV=1	tr|A0A7D6VUQ6|A0A7D6VUQ6_9CLOTCPBPfamilyintramembranemetalloproteaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	554.3438598513603	2	554.344261	1106.67397	1.1018	0.00061078	-2.8844	-0.0015989	-1.7826	-0.00098816	554.3418891298709	69.956	0.28543	69.956	69.77	70.056	0					19	8	3	0	0	0	0.28892	1	29116	29116		39.957	0	1	1663600			38355	16952	18996	19074	44477	44477					0.12489838073338433
VLISQQWKI	9	Unmodified	_VLISQQWKI_					0	0	0		ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	557.8350097537041	2	557.834591	1113.65463	1.3751	0.00076705	0.71508	0.00039889	2.0901	0.0011659	557.8349214942768	54.945	0.27819	54.945	54.79	55.068	0					12	9	2	0	0	0	0.44512	1	22911	22911		18.146	5.6148	1	904590			38356	6149	18997	19075	44478	44478					0.10234881782434968
VLISQQWKI	9	Unmodified	_VLISQQWKI_					0	0	0		ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	557.8364135622978	2	557.834591	1113.65463	1.8704	0.0010434	0.77929	0.00043471	2.6497	0.0014781	557.8353002590409	54.311	0.24971	54.632	54.476	54.726	0.32088					13	7	2	0	0	0	0.46566	2	22725	22725;22774		17.113	4.0704	1	882830			38357	6149	18997	19075	44479;44480	44479					0.10234881782434968
VLISQQWKI	9	Unmodified	_VLISQQWKI_					0	0	0		ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8359863162041	2	557.834591	1113.65463	0.73023	0.00040735	1.4279	0.00079653	2.1581	0.0012039	557.8356076141404	53.045	0.35382	54.446	54.248	54.602	1.4005					23	10	3	0	0	0	0.031377	2	22178	22178;22228		85.272	38.802	1	4228100			38358	6149	18997	19075	44481;44482	44481					0.10234881782434968
VLISQQWKI	9	Unmodified	_VLISQQWKI_					0	0	0		ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	ENST00000372892.7_1_20:43211346-43218471:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8347656130791	2	557.834591	1113.65463	1.1519	0.00064256	1.254	0.00069951	2.4059	0.0013421	557.834559630786	52.456	0.28747	54.428	54.257	54.545	1.9722					18	8	3	0	0	0	0.04145	2	21961	21961;22015		74.929	36.778	1	4209200			38359	6149	18997	19075	44483;44484	44483					0.10234881782434968
VLISSDSVKRV	11	Unmodified	_VLISSDSVKRV_					0	0	0			REV__nc|ENSG00000164049|Q6X9E4-2|FBXW12	REV__nc|ENSG00000164049|Q6X9E4-2|FBXW12	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.8594238162041	2	601.858795	1201.70304	2.5963	0.0015626	-0.89448	-0.00053835	1.7018	0.0010242	601.8582541012362	90.482	0.39563	90.482	90.256	90.651	0					31	12	3	0	0	0	1.0373	1	37878	37878		0.96228	0	1	3217500	+		38360	10712	18998	19076	44485	44485					0.11025330631650831
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2610046267509	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.09	1	105.09	104.59	105.59	0								0	0	0	0.66264	1	44526	44526		0	0	1		+		38361	15196	18999	19077	44486	44486					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2614623904228	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.26	1	106.26	105.76	106.76	0								0	0	0	0.66264	1	45305	45305		0	0	1		+		38362	15196	18999	19077	44487	44487					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2613403201103	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.66	1	108.66	108.16	109.16	0								0	0	0	0.66264	1	46858	46858		0	0	1		+		38363	15196	18999	19077	44488	44488					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2618591189384	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.75	1	108.75	108.25	109.25	0								0	0	0	0.66264	1	46921	46921		0	0	1		+		38364	15196	18999	19077	44489	44489					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2616454958916	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.88	1	108.88	108.38	109.38	0								0	0	0	0.66264	1	47002	47002		0	0	1		+		38365	15196	18999	19077	44490	44490					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617675662041	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.98	1	108.98	108.48	109.48	0								0	0	0	0.66264	1	47068	47068		0	0	1		+		38366	15196	18999	19077	44491	44491					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2617675662041	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.19	1	109.19	108.69	109.69	0								0	0	0	0.66264	1	47195	47195		0	0	1		+		38367	15196	18999	19077	44492	44492					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2615844607353	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.3	1	109.3	108.8	109.8	0								0	0	0	0.66264	1	47261	47261		0	0	1		+		38368	15196	18999	19077	44493	44493					0.2118325331300639
VLITTIIILL	10	Unmodified	_VLITTIIILL_					0	0	0			REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	REV__tr|A0A553SS68|A0A553SS68_NIACIDUF3221domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02520PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	371.2622253298759	3	371.261538	1110.76278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.41	1	109.41	108.91	109.91	0								0	0	0	0.66264	1	47326	47326		0	0	1		+		38369	15196	18999	19077	44494	44494					0.2118325331300639
VLITTLITA	9	Unmodified	_VLITTLITA_					0	0	0		ENSG00000155363|ENST00000369645|MOV10;MOV10|p.A658Sfs*13|1|0.06|ENSG00000155363|chr1:112696523-112696524|-/G|frameshift_variant;nc|ENSG00000155363|Q9HCE1-2|MOV10;ENST00000468624.5_1_1:113217534-113241292:+|nuORF;ENST00000496577.5_1_1:113231344-113241292:+|nuORF	ENSG00000155363|ENST00000369645|MOV10	ENSG00000155363|ENST00000369645|MOV10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	472.2763244509697	2	472.804968	943.595384	2.9269	0.0013838	1.9779	0.00093514	4.9047	0.002319	472.8057749765793	72.972	0.25388	74.782	74.671	74.925	1.8101					12	7	2	0	0	0	0.11645	1	30654	30654		4.756	0	1	547370			38370	3416	19000	19078	44495	44495					0.12132985768232629
VLKERHREK	9	Unmodified	_VLKERHREK_					0	0	0		nc|ENSG00000167110|Q08379-2|GOLGA2;nc|ENSG00000167110|Q08379|GOLGA2;ENSG00000167110|ENST00000611957|GOLGA2	nc|ENSG00000167110|Q08379-2|GOLGA2	nc|ENSG00000167110|Q08379-2|GOLGA2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8574706912041	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.84963	1	32882	32882		0.6015	0	1	11246000			38371	3949	19001	19079	44496	44496					0.11018705648439209
VLKGVSCT	8	Unmodified	_VLKGVSCT_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense;chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|13;chr1:54908858-54986097|175|10.81|0.03|8.66|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|13	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	806.4450561404228	1	806.444051	805.436775	2.7587	0.0022247	-1.1441	-0.00092262	1.6146	0.0013021	806.4435950816634	104.64	0.11838	104.7	104.62	104.74	0.056801					12	5	3	0	0	0	0.89178	1	44179	44179		0.69038	0	1	51593000			38372	174	19002	19080	44497	44497					0.026273685882870268
VLKGVSCT	8	Unmodified	_VLKGVSCT_					0	0	0		HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense;chr1:54908858-54991836|266|18.28|0.04|8.99|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|13;chr1:54908858-54986097|175|10.81|0.03|8.66|+|0|TE_info:HERVH-int,HERVH-int_dup94,ERV1,LTR,donor,-,54907642,54908858|None,TMEM61|13	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense	HERVH-int_dup4149|chr11:122547028-122555153:+|2.025780284758017|0.230452238566459|3.14|428.0|385|3|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	806.444051	805.436775	2.9188	0.0023538	-1.8089	-0.0014588	1.1098	0.00089503	806.4422282608235	104.55	0.11585	104.73	104.67	104.79	0.1731	0.015757	-0.00014213	NaN	0.69038	18	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	126400000			38373	174	19002	19080							0.026273685882870268
VLKIHRKER	9	Unmodified	_VLKIHRKER_					0	0	0		ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.8791381716728	2	589.877656	1177.74076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.477	1	48.477	47.977	48.977	0								0	0	0	0.42693	1	20246	20246		3.9444	0	1				38374	6532	19003	19081	44498	44498					0.15899886407783015
VLKIHRKER	9	Unmodified	_VLKIHRKER_					0	0	0		ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.8797485232353	2	589.877656	1177.74076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.042	1	49.042	48.542	49.542	0								0	0	0	0.42693	1	20476	20476		3.9444	0	1				38375	6532	19003	19081	44499	44499					0.15899886407783015
VLKIHRKER	9	Unmodified	_VLKIHRKER_					0	0	0		ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.8783447146416	2	589.877656	1177.74076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.32	1	49.32	48.82	49.82	0								0	0	0	0.42693	1	20590	20590		3.9444	0	1				38376	6532	19003	19081	44500	44500					0.15899886407783015
VLKIHRKER	9	Unmodified	_VLKIHRKER_					0	0	0		ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	ENST00000436126.5_1_2:177043793-177052894:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	589.8791992068291	2	589.877656	1177.74076	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.933	1	49.933	49.433	50.433	0								0	0	0	0.42693	1	20838	20838		3.9444	0	1				38377	6532	19003	19081	44501	44501					0.15899886407783015
VLKIMARKY	9	Unmodified	_VLKIMARKY_					0	0	0		tr|A0A553SNV5|A0A553SNV5_NIACItRNA-2-methylthio-N(6)-dimethylallyladenosinesynthaseOS=NialliacirculansOX=1397GN=miaBPE=3SV=1	tr|A0A553SNV5|A0A553SNV5_NIACItRNA-2-methylthio-N(6)-dimethylallyladenosinesynthaseOS=NialliacirculansOX=1397GN=miaBPE=3SV=1	tr|A0A553SNV5|A0A553SNV5_NIACItRNA-2-methylthio-N(6)-dimethylallyladenosinesynthaseOS=NialliacirculansOX=1397GN=miaBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5671569705009	3	374.566967	1120.67907	1.5728	0.0005891	-1.8921	-0.00070872	-0.31935	-0.00011962	374.5662708928669	52.268	0.60994	52.593	52.343	52.953	0.32554					36	19	2	0	0	0	0.8462	1	21987	21987		1.0715	0	1	1590300			38378	16437	19004	19082	44502	44502					0.12355818664286744
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.88905	1	0.88905	0.38905	1.389	0								0	0	0	0.66255	1	364	364		0.13989	0	1				38379	7047	19005	19083	44503	44503					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3149902224541	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.894	1	15.007	14.507	15.507	0.11295								0	0	0	0.66222	1	6181	6181		0.69767	0	1				38380	7047	19005	19083	44504	44504					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.01	1	15.123	14.623	15.623	0.11295								0	0	0	0.66255	1	6230	6230		0.13989	0	1				38381	7047	19005	19083	44505	44505					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.61	1	15.74	15.24	16.24	0.13022								0	0	0	0.66255	1	6478	6478		0.13989	0	1				38382	7047	19005	19083	44506	44506					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.173	1	17.324	16.824	17.824	0.15093								0	0	0	0.66255	1	7122	7122		0.13989	0	1				38383	7047	19005	19083	44507	44507					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.287	1	17.438	16.938	17.938	0.15093								0	0	0	0.66222	1	7170	7170		0.69767	0	1				38384	7047	19005	19083	44508	44508					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3136474490166	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.822	1	38.127	37.627	38.627	0.30497								0	0	0	0.66264	1	15908	15908		0	0	1				38385	7047	19005	19083	44509	44509					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163329958916	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.98	1	85.241	84.741	85.741	0.26083								0	0	0	0.66264	1	35534	35534		0	0	1				38386	7047	19005	19083	44510	44510					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3164245486259	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.666	1	85.918	85.418	86.418	0.25227								0	0	0	0.66264	1	35821	35821		0	0	1				38387	7047	19005	19083	44511	44511					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.788	1	86.04	85.54	86.54	0.25227								0	0	0	0.66264	1	35872	35872		0	0	1				38388	7047	19005	19083	44512	44512					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.909	1	86.162	85.662	86.662	0.25227								0	0	0	0.66264	1	35923	35923		0	0	1				38389	7047	19005	19083	44513	44513					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.151	1	86.403	85.903	86.903	0.25227								0	0	0	0.66264	1	36027	36027		0	0	1				38390	7047	19005	19083	44514	44514					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.266	1	86.516	86.016	87.016	0.24939								0	0	0	0.66264	1	36076	36076		0	0	1				38391	7047	19005	19083	44515	44515					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3157836794853	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.393	1	86.637	86.137	87.137	0.24387								0	0	0	0.66264	1	36130	36130		0	0	1				38392	7047	19005	19083	44516	44516					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	419.3149291872978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.08	1	104.13	103.63	104.63	0.059502								0	0	0	0.66264	1	43821	43821		0	0	1				38393	7047	19005	19083	44517	44517					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3165161013603	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.56	1	104.72	104.22	105.22	0.16055								0	0	0	0.66264	1	44324	44324		0	0	1				38394	7047	19005	19083	44518	44518					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3178893923759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.68	1	104.84	104.34	105.34	0.16055								0	0	0	0.66264	1	44411	44411		0	0	1				38395	7047	19005	19083	44519	44519					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.79	1	104.95	104.45	105.45	0.16055								0	0	0	0.66264	1	44483	44483		0	0	1				38396	7047	19005	19083	44520	44520					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3160888552666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.88	1	105.04	104.54	105.54	0.15859								0	0	0	0.66264	1	44552	44552		0	0	1				38397	7047	19005	19083	44521	44521					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3153869509697	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.99	1	105.15	104.65	105.65	0.15859								0	0	0	0.66264	1	44623	44623		0	0	1				38398	7047	19005	19083	44522	44522					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3147155642509	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.28	104.78	105.78	0.15859								0	0	0	0.66264	1	44699	44699		0	0	1				38399	7047	19005	19083	44523	44523					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.22	1	105.37	104.87	105.87	0.15859								0	0	0	0.66264	1	44762	44762		0	0	1				38400	7047	19005	19083	44524	44524					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3166381716728	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.31	1	105.47	104.97	105.97	0.15859								0	0	0	0.66264	1	44826	44826		0	0	1				38401	7047	19005	19083	44525	44525					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3178588747978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.41	1	105.57	105.07	106.07	0.15859								0	0	0	0.66264	1	44889	44889		0	0	1				38402	7047	19005	19083	44526	44526					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3167907595634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.54	1	105.69	105.19	106.19	0.15859								0	0	0	0.66264	1	44972	44972		0	0	1				38403	7047	19005	19083	44527	44527					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3170654177666	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.63	1	105.79	105.29	106.29	0.15859								0	0	0	0.66264	1	45036	45036		0	0	1				38404	7047	19005	19083	44528	44528					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3158141970634	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.73	1	105.89	105.39	106.39	0.15859								0	0	0	0.66264	1	45101	45101		0	0	1				38405	7047	19005	19083	44529	44529					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3159973025322	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.84	1	106	105.5	106.5	0.15859								0	0	0	0.66264	1	45180	45180		0	0	1				38406	7047	19005	19083	44530	44530					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3155090212822	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.96	1	106.12	105.62	106.62	0.15859								0	0	0	0.66264	1	45256	45256		0	0	1				38407	7047	19005	19083	44531	44531					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.08	1	106.24	105.74	106.74	0.15781								0	0	0	0.66264	1	45339	45339		0	0	1				38408	7047	19005	19083	44532	44532					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.43	1	12.192	11.692	12.692	0.76165								0	0	0	0.66255	1	4747	4747		0.13989	0	1				38409	7047	19005	19083	44533	44533					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3159362673759	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.909	1	12.696	12.196	13.196	0.78751								0	0	0	0.66222	1	4944	4944		0.69767	0	1				38410	7047	19005	19083	44534	44534					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3155700564384	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.103	1	17.142	16.642	17.642	1.0392								0	0	0	0.66222	1	6683	6683		0.69767	0	1				38411	7047	19005	19083	44535	44535					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3152648806572	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.212	1	17.251	16.751	17.751	1.0392								0	0	0	0.66222	1	6730	6730		0.69767	0	1				38412	7047	19005	19083	44536	44536					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3141052126884	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.99	1	104.16	103.66	104.66	0.1731								0	0	0	0.66264	1	43913	43913		0	0	1				38413	7047	19005	19083	44537	44537					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3170043826103	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.22	1	108.38	107.88	108.88	0.15795								0	0	0	0.66264	1	46672	46672		0	0	1				38414	7047	19005	19083	44538	44538					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3158447146416	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.4	1	108.55	108.05	109.05	0.1548								0	0	0	0.66264	1	46788	46788		0	0	1				38415	7047	19005	19083	44539	44539					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3159057497978	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.5	1	108.65	108.15	109.15	0.1548								0	0	0	0.66264	1	46852	46852		0	0	1				38416	7047	19005	19083	44540	44540					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3154174685478	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.6	1	108.75	108.25	109.25	0.1548								0	0	0	0.66264	1	46918	46918		0	0	1				38417	7047	19005	19083	44541	44541					0.3054822610067731
VLKKKKKKKK	10	Unmodified	_VLKKKKKKKK_					0	0	0		ENST00000522197.1_1_8:122652185-122654912:+|nuORF;ENST00000514180.5_1_8:122652059-122653623:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	ENST00000522197.1_1_8:122652185-122654912:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	419.3163024783134	3	419.314859	1254.92275	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.7	1	108.85	108.35	109.35	0.1548								0	0	0	0.66264	1	46984	46984		0	0	1				38418	7047	19005	19083	44542	44542					0.3054822610067731
VLKKMLKFLAK	11	Unmodified	_VLKKMLKFLAK_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.4713928103447	4	330.471535	1317.85703	1.0451	0.00034536	-1.0822	-0.00035764	-0.037156	-1.2279E-05	330.47119008636065	45.311	0.98748	46.677	46.305	47.293	1.3653					58	30	3	0	0	0	1.039	1	18991	18991		0.45452	0	1	1719200			38419	1605	19006	19084	44543	44543					0.21082068863483983
VLKLKRDV	8	Unmodified	_VLKLKRDV_					0	0	0			REV__ENSG00000163563|ENST00000368141|MNDA	REV__ENSG00000163563|ENST00000368141|MNDA	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2173644900322	3	324.218443	969.633501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.51	1	105.57	105.07	106.07	0.056801								0	0	0	1.0178	1	44750	44750		0.40072	0	1		+		38420	10693	19007	19085	44544	44544					0.14746916473552574
VLKLKRDV	8	Unmodified	_VLKLKRDV_					0	0	0			REV__ENSG00000163563|ENST00000368141|MNDA	REV__ENSG00000163563|ENST00000368141|MNDA	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2173950076103	3	324.218443	969.633501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.49	1	105.65	105.15	106.15	0.15859								0	0	0	1.0178	1	44940	44940		0.40072	0	1		+		38421	10693	19007	19085	44545	44545					0.14746916473552574
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.174	1	38.174	37.674	38.674	0								0	0	0	1.0178	1	16002	16002		0	0	1				38422	1649	19008	19086	44546	44546					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8996154665947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5749	1	1.7219	1.2219	2.2219	0.14703								0	0	0	1.0178	1	649	649		0	0	1				38423	1649	19008	19086	44547	44547					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998901247978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3539	1	5.4419	4.9419	5.9419	0.08803								0	0	0	1.0178	1	2211	2211		0	0	1				38424	1649	19008	19086	44548	44548					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8968	1	6.9732	6.4732	7.4732	0.07632								0	0	0	1.0178	1	2852	2852		0	0	1				38425	1649	19008	19086	44549	44549					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8993713259697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1098	1	8.1861	7.6861	8.6861	0.07632								0	0	0	1.0178	1	3356	3356		0	0	1				38426	1649	19008	19086	44550	44550					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998596072197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2044	1	8.2807	7.7807	8.7807	0.07632								0	0	0	1.0178	1	3396	3396		0	0	1				38427	1649	19008	19086	44551	44551					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.408	1	8.4843	7.9843	8.9843	0.07632								0	0	0	1.0178	1	3481	3481		0	0	1				38428	1649	19008	19086	44552	44552					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998901247978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5009	1	8.5773	8.0773	9.0773	0.07632								0	0	0	1.0178	1	3520	3520		0	0	1				38429	1649	19008	19086	44553	44553					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8991882205009	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7563	1	8.8326	8.3326	9.3326	0.07632								0	0	0	1.0178	1	3627	3627		0	0	1				38430	1649	19008	19086	44554	44554					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998290896416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8611	1	8.9374	8.4374	9.4374	0.07632								0	0	0	1.0178	1	3669	3669		0	0	1				38431	1649	19008	19086	44555	44555					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998290896416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9545	1	9.0308	8.5308	9.5308	0.07632								0	0	0	1.0178	1	3708	3708		0	0	1				38432	1649	19008	19086	44556	44556					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.214	1	16.344	15.844	16.844	0.13022								0	0	0	1.0178	1	6730	6730		0	0	1				38433	1649	19008	19086	44557	44557					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.316	1	16.447	15.947	16.947	0.13022								0	0	0	1.0178	1	6772	6772		0	0	1				38434	1649	19008	19086	44558	44558					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.18	1	17.331	16.831	17.831	0.15093								0	0	0	1.0178	1	7125	7125		0	0	1				38435	1649	19008	19086	44559	44559					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006835818291	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.926	1	59.252	58.752	59.752	0.32553								0	0	0	1.0178	1	24693	24693		0	0	1				38436	1649	19008	19086	44560	44560					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.74	1	78.056	77.556	78.556	0.31653								0	0	0	1.0178	1	32508	32508		0	0	1				38437	1649	19008	19086	44561	44561					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.046	1	78.355	77.855	78.855	0.30933								0	0	0	1.0178	1	32633	32633		0	0	1				38438	1649	19008	19086	44562	44562					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.213	1	78.523	78.023	79.023	0.30933								0	0	0	1.0178	1	32701	32701		0	0	1				38439	1649	19008	19086	44563	44563					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998901247978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82	1	82.28	81.78	82.78	0.2802								0	0	0	1.0178	1	34287	34287		0	0	1				38440	1649	19008	19086	44564	44564					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.212	1	82.492	81.992	82.992	0.2802								0	0	0	1.0178	1	34377	34377		0	0	1				38441	1649	19008	19086	44565	44565					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.341	1	82.621	82.121	83.121	0.2802								0	0	0	1.0178	1	34431	34431		0	0	1				38442	1649	19008	19086	44566	44566					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.015	1	83.285	82.785	83.785	0.27029								0	0	0	1.0178	1	34718	34718		0	0	1				38443	1649	19008	19086	44567	44567					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.194	1	83.464	82.964	83.964	0.27029								0	0	0	1.0178	1	34793	34793		0	0	1				38444	1649	19008	19086	44568	44568					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.379	1	83.649	83.149	84.149	0.27029								0	0	0	1.0178	1	34871	34871		0	0	1				38445	1649	19008	19086	44569	44569					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9007140994072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.632	1	83.903	83.403	84.403	0.27029								0	0	0	1.0178	1	34977	34977		0	0	1				38446	1649	19008	19086	44570	44570					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998901247978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.754	1	84.024	83.524	84.524	0.27029								0	0	0	1.0178	1	35029	35029		0	0	1				38447	1649	19008	19086	44571	44571					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.929	1	84.19	83.69	84.69	0.26083								0	0	0	1.0178	1	35105	35105		0	0	1				38448	1649	19008	19086	44572	44572					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.568	1	84.829	84.329	85.329	0.26083								0	0	0	1.0178	1	35366	35366		0	0	1				38449	1649	19008	19086	44573	44573					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9012634158134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.687	1	94.819	94.319	95.319	0.13168								0	0	0	1.0178	1	39627	39627		0	0	1				38450	1649	19008	19086	44574	44574					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.12	1	114.17	113.67	114.67	0.042839								0	0	0	1.0178	1	49135	49135		0	0	1				38451	1649	19008	19086	44575	44575					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.52	1	114.56	114.06	115.06	0.042839								0	0	0	1.0178	1	49294	49294		0	0	1				38452	1649	19008	19086	44576	44576					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.52	1	116.56	116.06	117.06	0.041039								0	0	0	1.0178	1	50098	50098		0	0	1				38453	1649	19008	19086	44577	44577					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.746	1	15.515	15.015	16.015	0.76937								0	0	0	1.0178	1	6129	6129		0	0	1				38454	1649	19008	19086	44578	44578					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.585	1	66.984	66.484	67.484	1.3989								0	0	0	1.0178	1	27505	27505		0	0	1				38455	1649	19008	19086	44579	44579					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.053	1	83.266	82.766	83.766	1.2125								0	0	0	1.0178	1	34447	34447		0	0	1				38456	1649	19008	19086	44580	44580					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.8997375369072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5397	1	10.284	9.7843	10.784	0.74462								0	0	0	1.0178	1	3970	3970		0	0	1				38457	1649	19008	19086	44581	44581					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.931	1	23.547	23.047	24.047	1.6158								0	0	0	1.0178	1	9150	9150		0	0	1				38458	1649	19008	19086	44582	44582					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.497	1	42.359	41.859	42.859	1.8624								0	0	0	1.0178	1	16977	16977		0	0	1				38459	1649	19008	19086	44583	44583					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.387	1	54.36	53.86	54.86	1.9722								0	0	0	1.0178	1	21950	21950		0	0	1				38460	1649	19008	19086	44584	44584					0.21343347286892822
VLKLLLLL	8	Unmodified	_VLKLLLLL_					0	0	0		ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	ENSG00000108829|ENST00000225972|LRRC59	MSMS	GG20161007_CRH_Patient100_W632_02	4	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.508	1	66.436	65.936	66.936	1.928								0	0	0	1.0178	1	27062	27062		0	0	1				38461	1649	19008	19086	44585	44585					0.21343347286892822
VLKLREESF	9	Unmodified	_VLKLREESF_					0	0	0			REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8220703005791	2	560.821681	1119.62881	5.5536	0.0031146	-1.7805	-0.00099852	3.7731	0.0021161	560.8184809954901	88.264	0.38575	89.32	89.144	89.53	1.0562					20	11	3	0	0	0	0.75101	1	37264	37264		8.5933	3.3626	1	2376900	+		38462	8573	19009	19087	44586	44586					0.07377987540121467
VLKLREESF	9	Unmodified	_VLKLREESF_					0	0	0			REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8221923708916	2	560.821681	1119.62881	4.6602	0.0026135	-2.5821	-0.0014481	2.078	0.0011654	560.8197764979941	87.999	0.41512	89.446	89.284	89.699	1.4467					23	12	3	0	0	0	0.75101	1	37089	37089		8.5933	3.3626	1	1945200	+		38463	8573	19009	19087	44587	44587					0.07377987540121467
VLKLREESF	9	Unmodified	_VLKLREESF_					0	0	0			REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	560.821681	1119.62881	1.9628	0.0011008	-3.6784	-0.002063	-1.7157	-0.00096218	560.8193690746808	88.972	0.44698	88.972	88.762	89.209	0	-0.24888	-0.00097084	NaN	8.5933	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2445900	+		38464	8573	19009	19087							0.07377987540121467
VLKLREESF	9	Unmodified	_VLKLREESF_					0	0	0			REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	REV__ENST00000554059.1_1_14:69866086-69895394:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	560.821681	1119.62881	5.5536	0.0031146	-1.7805	-0.00099852	3.7731	0.0021161	560.8184809954901	88.264	0.38575	89.32	89.144	89.53	1.0562	0.098902	0.001158	NaN	8.5933	20	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2376900	+		38465	8573	19009	19087							0.07377987540121467
VLKNIKIKKPR	11	Unmodified	_VLKNIKIKKPR_					0	0	0		tr|A0A7D6VSZ3|A0A7D6VSZ3_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08710PE=4SV=1	tr|A0A7D6VSZ3|A0A7D6VSZ3_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08710PE=4SV=1	tr|A0A7D6VSZ3|A0A7D6VSZ3_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08710PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	668.9621459841728	2	668.961189	1335.90782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.659	1	61.659	61.159	62.159	0								0	0	0	0.63775	1	25708	25708		1.3295	0.92882	1				38466	16894	19010	19088	44588	44588					0.25330734232670693
VLKQLSPRL	9	Unmodified	_VLKQLSPRL_					0	0	0			REV__ENST00000554429.5_1_14:45565874-45579180:+|nuORF	REV__ENST00000554429.5_1_14:45565874-45579180:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.8987914919853	3	351.897481	1052.67061	0.84128	0.00029604	2.6543	0.00093406	3.4956	0.0012301	351.8983976644453	38.726	0.54518	40.562	40.335	40.88	1.8366					38	16	3	0	0	0	0.30098	1	16292	16292		18.373	4.7582	1	1987500	+		38467	13852	19011	19089	44589	44589					0.1463858801932929
VLKRKRPI	8	Unmodified	_VLKRKRPI_					0	0	0			REV__RBM25|p.V706I|1|0.1|ENSG00000119707|chr14:73111626-73111626|G/A|missense_variant	REV__RBM25|p.V706I|1|0.1|ENSG00000119707|chr14:73111626-73111626|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	337.2351257205009	3	337.237949	1008.69202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.17	1	105.17	104.67	105.67	0								0	0	0	1.0178	1	44580	44580		0.45834	0	1		+		38468	14611	19012	19090	44590	44590					0.18802017838686425
VLKRRRLKGRK	11	Unmodified	_VLKRRRLKGRK_					0	0	0		tr|A0A7D6VR42|A0A7D6VR42_9CLOTLargeribosomalsubunitproteinbL34OS=ClostridiumintestinaleOX=36845GN=rpmHPE=3SV=1	tr|A0A7D6VR42|A0A7D6VR42_9CLOTLargeribosomalsubunitproteinbL34OS=ClostridiumintestinaleOX=36845GN=rpmHPE=3SV=1	tr|A0A7D6VR42|A0A7D6VR42_9CLOTLargeribosomalsubunitproteinbL34OS=ClostridiumintestinaleOX=36845GN=rpmHPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	705.4863159060478	2	705.486228	1408.9579	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.76	1	112.76	112.26	113.26	0								0	0	0	0.63775	1	48737	48737		0	0	1				38469	16818	19013	19091	44591	44591					0.2697828168115848
VLKTLNIK	8	Unmodified	_VLKTLNIK_					0	0	0			REV__tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	REV__tr|A0A7D6W2U9|A0A7D6W2U9_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.6211425662041	1	928.618979	927.611703	3.3358	0.0030977	-0.91315	-0.00084797	2.4227	0.0022498	928.6177934793749	106.13	0.17796	106.29	106.19	106.37	0.15781					32	9	5	0	0	0	0.89178	1	45425	45425		0.69038	0	1	712420000	+		38470	15606	19014	19092	44592	44592					0.1450011172497625
VLKVFLENV	9	Unmodified	_VLKVFLENV_					0	0	0		ENSG00000158406|ENST00000377727|H4C8;ENSG00000274618|ENST00000244537|H4C6;ENSG00000278705|ENST00000377745|H4C2;ENSG00000278637|ENST00000617569|H4C1;ENSG00000277157|ENST00000614247|H4C4;ENSG00000276966|ENST00000615164|H4C5;ENSG00000275126|ENST00000618305|H4C13;ENSG00000276180|ENST00000615353|H4C9;ENSG00000273542|ENST00000611927|H4C12;ENSG00000270882|ENST00000578186|H4C14;ENSG00000270276|ENST00000579512|H4C15;ENSG00000197837|ENST00000539745|H4C16;ENSG00000197238|ENST00000355057|H4C11;ENSG00000197061|ENST00000377803|H4C3	ENSG00000158406|ENST00000377727|H4C8	ENSG00000158406|ENST00000377727|H4C8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.8237792849541	2	530.823692	1059.63283	1.9512	0.0010357	0.40689	0.00021598	2.358	0.0012517	530.8235631750861	57.633	0.30621	57.633	57.479	57.785	0					14	9	2	0	0	0	0.17276	1	24076	24076		36.127	10.728	1	743990			38471	3501	19015	19093	44593	44593					0.10540077033851958
VLKWYWRT	8	Unmodified	_VLKWYWRT_					0	0	0			REV__nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	REV__nc|ENSG00000076826|Q9P1Y5-2|CAMSAP3	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3220092654228	2	576.321651	1150.62875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.14	1	53.14	52.64	53.64	0								0	0	0	1.0178	1	22160	22160		2.8892	0.58649	1		+		38472	14394	19016	19094	44594	44594					0.059460323307803264
VLLANHSVPL	10	Unmodified	_VLLANHSVPL_					0	0	0			REV__nc|ENSG00000075340|P35612-2|ADD2	REV__nc|ENSG00000075340|P35612-2|ADD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.8186523318291	2	531.818941	1061.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.601	1	70.967	70.467	71.467	1.3657								0	0	0	0.65773	1	29215	29215		7.2892	0.56607	1		+		38473	8760	19017	19095	44595	44595					0.09498308748334239
VLLAQIIQV	9	Unmodified	_VLLAQIIQV_					0	0	0		NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant;NAV2|p.D962Ifs*69|1|0.03|ENSG00000166833|chr11:20036003-20036004|-/CATTCTTTTTCATCTTTTTA|frameshift_variant;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	498.8284179568291	2	498.826235	995.637917	3.4239	0.0017079	0.69554	0.00034695	4.1195	0.0020549	498.8266067146755	82.534	0.31924	83.747	83.57	83.889	1.2125					23	9	3	0	0	0	0.04206	1	34638	34638		74.396	3.6808	1	1193100			38474	3923	19018	19096	44596	44596					0.13992380896479517
VLLAQIIQV	9	Unmodified	_VLLAQIIQV_					0	0	0		NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant;NAV2|p.D962Ifs*69|1|0.03|ENSG00000166833|chr11:20036003-20036004|-/CATTCTTTTTCATCTTTTTA|frameshift_variant;nc|ENSG00000166833|Q8IVL1-4|NAV2;nc|ENSG00000166833|Q8IVL1-8|NAV2;nc|ENSG00000166833|Q8IVL1-9|NAV2;nc|ENSG00000166833|Q8IVL1-10|NAV2;nc|ENSG00000166833|Q8IVL1-13|NAV2;nc|ENSG00000166833|Q8IVL1-12|NAV2;nc|ENSG00000166833|Q8IVL1-11|NAV2;ENSG00000166833|ENST00000349880|NAV2;nc|ENSG00000166833|Q8IVL1-2|NAV2;nc|ENSG00000166833|Q8IVL1|NAV2	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	NAV2|p.M254Sfs*93|1|0.17|ENSG00000166833|chr11:19880118-19880118|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.8285400271416	2	498.826235	995.637917	3.4473	0.0017196	1.0228	0.00051021	4.4701	0.0022298	498.8270618386695	82.048	0.34766	83.719	83.545	83.892	1.67					18	10	2	0	0	0	0.078975	1	34420	34420		56.541	20.497	1	772050			38475	3923	19018	19096	44597	44597					0.13992380896479517
VLLCSLAEHDL	11	Unmodified	_VLLCSLAEHDL_					0	0	0			REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	REV__nc|ENSG00000086758|Q7Z6Z7-2|HUWE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.8205444216728	2	606.818281	1211.62201	2.3738	0.0014404	0.048716	2.9562E-05	2.4225	0.00147	606.8182103627516	71.211	0.47964	72.552	72.333	72.812	1.3415					53	15	5	0	0	0	0.33951	1	29937	29937		29.082	7.3349	1	7903000	+		38476	8861	19019	19097	44598	44598					0.024663065972617915
VLLDYHLNYL	10	Unmodified	_VLLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	631.8428832888603	2	631.842613	1261.67067	1.937	0.0012238	-0.31245	-0.00019742	1.6245	0.0010264	631.8421236966822	68.311	0.28426	68.311	68.169	68.453	0					19	8	3	0	0	0	0.049285	2	28465	28422;28465		86.332	53.546	1	1561400			38477	1380	19020	19098	44599;44600	44600					0.05030543228667739
VLLDYHLNYL	10	Unmodified	_VLLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	631.8452026247978	2	631.842613	1261.67067	1.578	0.00099703	0.549	0.00034688	2.127	0.0013439	631.8430802218809	67.816	0.28604	68.138	67.964	68.25	0.32269					22	8	3	0	0	0	0.057404	2	28375	28375;28426		75.761	42.975	1	1935600			38478	1380	19020	19098	44601;44602	44601					0.05030543228667739
VLLDYHLNYL	10	Unmodified	_VLLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	631.8439819216728	2	631.842613	1261.67067	1.5918	0.0010058	0.55944	0.00035348	2.1512	0.0013592	631.8430014093107	66.623	0.37245	68.012	67.812	68.184	1.3888					33	11	4	0	0	0	0.073205	2	27909	27909;27954		163.04	88.107	1	7714400			38479	1380	19020	19098	44603;44604	44603					0.05030543228667739
VLLDYHLNYL	10	Unmodified	_VLLDYHLNYL_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	631.8431884646416	2	631.842613	1261.67067	1.2503	0.00079002	0.3258	0.00020585	1.5761	0.00099588	631.8428448121119	66.184	0.37431	68.073	67.871	68.245	1.8889					32	11	4	0	0	0	0.062288	2	27732	27732;27785		103.42	66.913	1	5601400			38480	1380	19020	19098	44605;44606	44605					0.05030543228667739
VLLEETLKHI	10	Unmodified	_VLLEETLKHI_					0	0	0		GOLPH3L|p.D120E|1|0.25|ENSG00000143457|chr1:150661884-150661884|A/T|missense_variant	GOLPH3L|p.D120E|1|0.25|ENSG00000143457|chr1:150661884-150661884|A/T|missense_variant	GOLPH3L|p.D120E|1|0.25|ENSG00000143457|chr1:150661884-150661884|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8600341677666	2	597.858264	1193.70197	1.4016	0.00083797	-2.0861	-0.0012472	-0.68445	-0.00040921	597.8570776506242	77.203	0.63533	78.954	78.655	79.29	1.7514					39	19	3	0	0	0	0.84024	1	32337	32337		7.9102	2.1783	1	1929300			38481	7591	19021	19099	44607	44607					0.11287116262769814
VLLEKVIFA	9	Unmodified	_VLLEKVIFA_					0	0	0		ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;ENST00000491811.5_1_1:68608485-68620847:-|nuORF;nc|ENSG00000116729|Q5T9L3-3|WLS	ENSG00000116729|ENST00000262348|WLS	ENSG00000116729|ENST00000262348|WLS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3311645388603	2	516.328611	1030.64267	2.6405	0.0013634	1.8291	0.00094442	4.4696	0.0023078	516.3296512925953	61.119	0.36878	63.084	62.881	63.25	1.9653					22	11	3	0	0	0	0.093059	1	25653	25653		51.63	5.6089	1	2129500			38482	1984	19022	19100	44608	44608					0.1285726503922433
VLLEKVIFA	9	Unmodified	_VLLEKVIFA_					0	0	0		ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;ENST00000491811.5_1_1:68608485-68620847:-|nuORF;nc|ENSG00000116729|Q5T9L3-3|WLS	ENSG00000116729|ENST00000262348|WLS	ENSG00000116729|ENST00000262348|WLS	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	516.328611	1030.64267	2.2482	0.0011608	-0.13191	-6.8107E-05	2.1163	0.0010927	516.3286676871608	63.586	0.34565	63.586	63.398	63.744	0	0.31235	-0.0016453	NaN	51.63	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	429350			38483	1984	19022	19100							0.1285726503922433
VLLEKVIFA	9	Unmodified	_VLLEKVIFA_					0	0	0		ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;ENST00000491811.5_1_1:68608485-68620847:-|nuORF;nc|ENSG00000116729|Q5T9L3-3|WLS	ENSG00000116729|ENST00000262348|WLS	ENSG00000116729|ENST00000262348|WLS	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.328611	1030.64267	2.0515	0.0010592	1.5311	0.00079054	3.5825	0.0018498	516.3296366422037	63	0.28165	63.329	63.13	63.412	0.32974	0.055548	7.2038E-05	NaN	51.63	13	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	809130			38484	1984	19022	19100							0.1285726503922433
VLLEKVIFA	9	Unmodified	_VLLEKVIFA_					0	0	0		ENSG00000116729|ENST00000262348|WLS;nc|ENSG00000116729|Q5T9L3-2|WLS;ENST00000491811.5_1_1:68608485-68620847:-|nuORF;nc|ENSG00000116729|Q5T9L3-3|WLS	ENSG00000116729|ENST00000262348|WLS	ENSG00000116729|ENST00000262348|WLS	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	516.328611	1030.64267	3.1639	0.0016336	1.3579	0.00070114	4.5219	0.0023348	516.3291122134036	61.678	0.31136	63.096	62.927	63.238	1.4177	-0.17801	-0.00010676	NaN	51.63	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2319500			38485	1984	19022	19100							0.1285726503922433
VLLELQQHL	9	Unmodified	_VLLELQQHL_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8243286013603	2	546.824224	1091.63389	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.547	1	52.547	52.047	53.047	0								0	0	0	0.29347	1	21914	21914		19.257	6.7254	1				38486	4600	19023	19101	44609	44609					0.09174291402769086
VLLELQQHL	9	Unmodified	_VLLELQQHL_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.8254272341728	2	546.824224	1091.63389	1.7029	0.00093121	-0.17753	-9.708E-05	1.5254	0.00083413	546.8240188228297	51.938	0.15186	52.263	52.191	52.343	0.32553					8	4	2	0	0	0	0.39927	1	21770	21770		20.454	2.3186	1	750070			38487	4600	19023	19101	44610	44610					0.09174291402769086
VLLELQQHL	9	Unmodified	_VLLELQQHL_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.8242675662041	2	546.824224	1091.63389	1.4804	0.00080949	0.65277	0.00035695	2.1331	0.0011664	546.8238469311118	50.712	0.27299	52.106	51.924	52.197	1.3938					15	8	2	0	0	0	0.042029	1	21213	21213		74.423	20.59	1	1312600			38488	4600	19023	19101	44611	44611					0.09174291402769086
VLLELQQHL	9	Unmodified	_VLLELQQHL_					0	0	0		ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	ENSG00000182158|ENST00000330387|CREB3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8257324099541	2	546.824224	1091.63389	1.61	0.0008804	0.5587	0.00030551	2.1687	0.0011859	546.8234830996241	50.077	0.24409	52.054	51.946	52.191	1.9772					14	7	2	0	0	0	0.042029	1	20972	20972		74.423	26.674	1	1385000			38489	4600	19023	19101	44612	44612					0.09174291402769086
VLLENSSIVKI	11	Unmodified	_VLLENSSIVKI_					0	0	0		ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	405.5829650759697	3	405.583339	1213.72819	0.40687	0.00016502	0.30648	0.0001243	0.71335	0.00028932	405.5832385666013	42.65	0.27989	42.65	42.509	42.789	0					14	8	2	0	0	0	0.69826	1	17855	17855		18.34	3.5018	1	1666100			38490	5588	19024	19102	44613	44613					0.12987385434234966
VLLENSSIVKI	11	Unmodified	_VLLENSSIVKI_					0	0	0		ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5838195681572	3	405.583339	1213.72819	1.9746	0.00080086	-0.76961	-0.00031214	1.205	0.00048872	405.5831273688106	40.462	0.24888	41.772	41.665	41.914	1.3102					17	7	3	0	0	0	0.69826	1	16976	16976		18.34	6.8218	1	1794200			38491	5588	19024	19102	44614	44614					0.12987385434234966
VLLENSSIVKI	11	Unmodified	_VLLENSSIVKI_					0	0	0		ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	ENST00000253247.8_1_17:65732103-65732808:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5847961306572	3	405.583339	1213.72819	1.8357	0.00074453	-0.33129	-0.00013437	1.5044	0.00061016	405.5832460689018	40.141	0.31359	42.003	41.8	42.114	1.8624					16	9	2	0	0	0	0.69826	1	16812	16812		18.34	3.5018	1	2102600			38492	5588	19024	19102	44615	44615					0.12987385434234966
VLLEQEKTFFT	11	Unmodified	_VLLEQEKTFFT_					0	0	0		ENST00000464735.1_1_13:24164310-24168479:+|nuORF;ENSG00000127863|ENST00000248484|TNFRSF19;nc|ENSG00000127863|Q9NS68|TNFRSF19	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	677.8677245974541	2	677.866285	1353.71802	1.8567	0.0012586	0.43819	0.00029703	2.2949	0.0015556	677.866535914056	54.223	0.2557	54.544	54.411	54.667	0.32088					12	7	2	0	0	0	0.32985	1	22726	22726		29.841	9.426	1	643920			38493	2347	19025	19103	44616	44616					0.055307777089637966
VLLEQEKTFFT	11	Unmodified	_VLLEQEKTFFT_					0	0	0		ENST00000464735.1_1_13:24164310-24168479:+|nuORF;ENSG00000127863|ENST00000248484|TNFRSF19;nc|ENSG00000127863|Q9NS68|TNFRSF19	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	677.8660766482353	2	677.866285	1353.71802	0.73018	0.00049497	-0.79966	-0.00054206	-0.069471	-4.7092E-05	677.8659315329786	52.55	0.22485	54.522	54.385	54.61	1.9722					13	6	3	0	0	0	0.28398	1	22030	22030		33.445	19.539	1	780280			38494	2347	19025	19103	44617	44617					0.055307777089637966
VLLEQEKTFFT	11	Unmodified	_VLLEQEKTFFT_					0	0	0		ENST00000464735.1_1_13:24164310-24168479:+|nuORF;ENSG00000127863|ENST00000248484|TNFRSF19;nc|ENSG00000127863|Q9NS68|TNFRSF19	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	677.866285	1353.71802	2.1359	0.0014479	-0.4069	-0.00027582	1.729	0.0011721	677.8661945035137	54.839	0.22614	54.839	54.725	54.951	0	0.24604	-0.00049611	NaN	33.445	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	664570			38495	2347	19025	19103							0.055307777089637966
VLLEQEKTFFT	11	Unmodified	_VLLEQEKTFFT_					0	0	0		ENST00000464735.1_1_13:24164310-24168479:+|nuORF;ENSG00000127863|ENST00000248484|TNFRSF19;nc|ENSG00000127863|Q9NS68|TNFRSF19	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	ENST00000464735.1_1_13:24164310-24168479:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	677.866285	1353.71802	0.41146	0.00027891	1.4387	0.00097526	1.8502	0.0012542	677.8675154955349	53.067	0.15949	54.467	54.41	54.57	1.4005	-0.12576	0.002006	NaN	33.445	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	586440			38496	2347	19025	19103							0.055307777089637966
VLLEQFLTL	9	Unmodified	_VLLEQFLTL_					0	0	0		ENST00000425020.6_1_8:17132428-17137812:+|nuORF;ENST00000520639.1_1_5:153873511-153874012:+|nuORF;nc|ENSG00000155975|Q8NEZ2-2|VPS37A;ENSG00000155975|ENST00000324849|VPS37A	ENST00000425020.6_1_8:17132428-17137812:+|nuORF	ENST00000425020.6_1_8:17132428-17137812:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3254882693291	2	538.323525	1074.6325	1.4229	0.00076598	1.4885	0.0008013	2.9114	0.0015673	538.3246900426045	96.646	0.12399	96.646	96.571	96.695	0					7	3	3	0	0	0	0.22154	1	40408	40408		30.637	0	1	1710400			38497	3435	19026	19104	44618	44618					0.09816657313990618
VLLEQFLTL	9	Unmodified	_VLLEQFLTL_					0	0	0		ENST00000425020.6_1_8:17132428-17137812:+|nuORF;ENST00000520639.1_1_5:153873511-153874012:+|nuORF;nc|ENSG00000155975|Q8NEZ2-2|VPS37A;ENSG00000155975|ENST00000324849|VPS37A	ENST00000425020.6_1_8:17132428-17137812:+|nuORF	ENST00000425020.6_1_8:17132428-17137812:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	538.323525	1074.6325	2.7631	0.0014874	-1.5642	-0.00084204	1.1989	0.0006454	538.3231977642162	96.515	0.12116	96.62	96.543	96.664	0.105	-0.012862	-0.0021096	NaN	30.637	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1080500			38498	3435	19026	19104							0.09816657313990618
VLLESEQFL	9	Unmodified	_VLLESEQFL_					0	0	0		ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENSG00000140319|ENST00000267884|SRP14	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.2919799685478	2	539.294965	1076.57538	1.4743	0.00079507	-3.3282	-0.0017949	-1.854	-0.00099984	539.2938501080092	68.798	0.3745	68.798	68.612	68.986	0					26	11	3	0	0	0	0.09539	2	28628	28628;28675		50.855	20.63	1	2446900			38499	2908	19027	19105	44619;44620	44619					0.04015190037625871
VLLESEQFL	9	Unmodified	_VLLESEQFL_					0	0	0		ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENSG00000140319|ENST00000267884|SRP14	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.2956420779228	2	539.294965	1076.57538	1.6013	0.00086357	-2.0478	-0.0011043	-0.44647	-0.00024078	539.294485522004	68.382	0.37416	68.704	68.502	68.876	0.32224					36	11	4	0	0	0	0.11478	1	28650	28650		44.407	2.3125	1	2829500			38500	2908	19027	19105	44621	44621					0.04015190037625871
VLLESEQFL	9	Unmodified	_VLLESEQFL_					0	0	0		ENST00000558243.1_1_15:40330963-40331317:-|nuORF;ENST00000558527.5_1_15:40329525-40331317:-|nuORF;ENSG00000140319|ENST00000267884|SRP14	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	ENST00000558243.1_1_15:40330963-40331317:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2954589724541	2	539.294965	1076.57538	1.94	0.0010462	-0.40401	-0.00021788	1.536	0.00082836	539.2946608144024	67.195	0.5184	68.584	68.343	68.861	1.3888					49	16	5	0	0	0	0.026628	2	28200	28149;28200		92.822	15.983	1	9442600			38501	2908	19027	19105	44622;44623	44623					0.04015190037625871
VLLESKILL	9	Unmodified	_VLLESKILL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;DENND4C|p.S1184Afs*8|1|0.04|ENSG00000137145|chr9:19346465-19346466|-/GCCA|frameshift_variant;DENND4C|p.S1183Rfs*22|1|0.06|ENSG00000137145|chr9:19346464-19346465|-/GGAGCAGA|frameshift_variant;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.3417846560478	2	514.341718	1026.66888	2.4274	0.0012485	-1.8411	-0.00094696	0.58633	0.00030157	514.3405284930182	62.03	0.1573	62.03	61.929	62.086	0					7	4	2	0	0	0	0.11643	1	25862	25862		43.858	3.901	1	526250			38502	2760	19028	19106	44624	44624					0.15661534210721584
VLLESKILL	9	Unmodified	_VLLESKILL_					0	0	0		nc|ENSG00000137145|Q5VZ89|DENND4C;ENSG00000137145|ENST00000434457|DENND4C;ENST00000380437.8_1_9:19290781-19335045:+|nuORF;DENND4C|p.S1184Afs*8|1|0.04|ENSG00000137145|chr9:19346465-19346466|-/GCCA|frameshift_variant;DENND4C|p.S1183Rfs*22|1|0.06|ENSG00000137145|chr9:19346464-19346465|-/GGAGCAGA|frameshift_variant;nc|ENSG00000137145|Q5VZ89-5|DENND4C;nc|ENSG00000137145|Q5VZ89-3|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	nc|ENSG00000137145|Q5VZ89|DENND4C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.2969238162041	2	514.341718	1026.66888	3.1612	0.0016259	-1.5125	-0.00077796	1.6486	0.00084795	514.3409660435051	59.629	0.23735	61.598	61.466	61.703	1.969					12	7	2	0	0	0	0.095205	1	25047	25047		19.257	3.4098	1	1347200			38503	2760	19028	19106	44625	44625					0.15661534210721584
VLLFEFTPAL	10	Unmodified	_VLLFEFTPAL_					0	0	0			REV__tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	REV__tr|A0A553SPW6|A0A553SPW6_NIACILincomycineffluxMFStransporterLmr(B)OS=NialliacirculansOX=1397GN=lmr(B)PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.3301269412041	2	575.33135	1148.64815	1.0109	0.0005816	-1.5276	-0.00087887	-0.5167	-0.00029727	575.3301067557411	38.232	0.22011	40.053	39.879	40.099	1.8202					12	6	2	0	0	0	0.75645	1	16037	16037		15.847	1.0089	1	673110	+		38504	15110	19029	19107	44626	44626					0.07976943831044991
VLLGATTLV	9	Unmodified	_VLLGATTLV_					0	0	0		nc|ENSG00000142166|P17181-2|IFNAR1;IFNAR1|p.S422Lfs*20|1|0.22|ENSG00000142166|chr21:33352872-33352873|-/TT|frameshift_variant;IFNAR1|p.K417Rfs*25|1|0.04|ENSG00000142166|chr21:33352863-33352864|-/GG|frameshift_variant;nc|ENSG00000142166|P17181-3|IFNAR1;ENSG00000142166|ENST00000270139|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	886.5625488162041	1	886.560795	885.553519	1.9717	0.0017481	0.067725	6.0042E-05	2.0395	0.0018081	886.5606631290067	64.884	0.35034	65.21	65.038	65.388	0.32689					22	10	3	0	0	0	0.098957	1	27159	27159		49.669	1.3231	1	2390300			38505	2984	19030	19108	44627	44627					0.10616430079710426
VLLGGVASL	9	Unmodified	_VLLGGVASL_					0	0	0		CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant;CUTA|p.V159Ffs*16|1|0.05|ENSG00000112514|chr6:33416772-33416773|-/CCGGACTCTGTATGATTGAA|frameshift_variant;ENSG00000112514|ENST00000488034|CUTA	CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant	CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	828.5228759646416	1	828.518931	827.511654	1.878	0.001556	1.1177	0.00092602	2.9957	0.002482	828.5196592671273	63.848	0.28948	65.255	65.079	65.368	1.4071					13	8	2	0	0	0	0.087207	1	26764	26764		53.576	6.6547	1	800250			38506	386	19031	19109	44628	44628					0.09099874391188223
VLLGGVASL	9	Unmodified	_VLLGGVASL_					0	0	0		CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant;CUTA|p.V159Ffs*16|1|0.05|ENSG00000112514|chr6:33416772-33416773|-/CCGGACTCTGTATGATTGAA|frameshift_variant;ENSG00000112514|ENST00000488034|CUTA	CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant	CUTA|p.A113Efs*28|1|0.06|ENSG00000112514|chr6:33417289-33417290|-/CA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	828.5176879763603	1	828.518931	827.511654	2.1081	0.0017466	-0.46483	-0.00038512	1.6433	0.0013615	828.5184796408499	63.288	0.25438	65.232	65.091	65.345	1.9444					13	7	2	0	0	0	0.087207	1	26566	26566		53.576	5.2297	1	681940			38507	386	19031	19109	44629	44629					0.09099874391188223
VLLGHIFYV	9	Unmodified	_VLLGHIFYV_					0	0	0		ENSG00000129933|ENST00000262815|MAU2;ENST00000262816.11_1_19:19456115-19463084:+|nuORF;nc|ENSG00000129933|Q9Y6X3-3|MAU2;ENST00000589947.7_1_19:19459550-19465349:+|nuORF;nc|ENSG00000129933|Q9Y6X3-2|MAU2;ENST00000587709.5_1_19:19459550-19466588:+|nuORF	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.8145629763603	2	530.813128	1059.6117	1.6739	0.00088854	1.5872	0.00084248	3.2611	0.001731	530.8139205045793	71.019	0.41582	71.019	70.811	71.227	0					23	12	2	0	0	0	0.035716	1	29596	29596		79.935	39.486	1	2856500			38508	2412	19032	19110	44630	44630					0.0842811172499296
VLLGHIFYV	9	Unmodified	_VLLGHIFYV_					0	0	0		ENSG00000129933|ENST00000262815|MAU2;ENST00000262816.11_1_19:19456115-19463084:+|nuORF;nc|ENSG00000129933|Q9Y6X3-3|MAU2;ENST00000589947.7_1_19:19459550-19465349:+|nuORF;nc|ENSG00000129933|Q9Y6X3-2|MAU2;ENST00000587709.5_1_19:19459550-19466588:+|nuORF	ENSG00000129933|ENST00000262815|MAU2	ENSG00000129933|ENST00000262815|MAU2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8137084841728	2	530.813128	1059.6117	1.4013	0.00074384	0.12311	6.5346E-05	1.5244	0.00080919	530.8130013915455	70.371	0.41849	70.694	70.474	70.892	0.32224					24	13	2	0	0	0	0.035716	1	29448	29448		79.935	39.486	1	4244300			38509	2412	19032	19110	44631	44631					0.0842811172499296
VLLGHIQK	8	Unmodified	_VLLGHIQK_					0	0	0		ENSG00000144649|ENST00000430121|GASK1A	ENSG00000144649|ENST00000430121|GASK1A	ENSG00000144649|ENST00000430121|GASK1A	MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1950256228447	3	303.195639	906.565087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.14	1	104.14	103.64	104.64	0								0	0	0	1.0178	1	43900	43900		0.45834	0	1				38510	3086	19033	19111	44632	44632					0.10806671893715247
VLLGKVYVV	9	Unmodified	_VLLGKVYVV_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.3246948122978	2	495.323328	988.632104	1.6219	0.00080338	0.26466	0.00013109	1.8866	0.00093447	495.32337522719075	52.334	0.50294	52.334	52.099	52.602	0					47	15	4	0	0	0	0.033794	4	21815	21770;21815;21854;21898		81.613	45.486	1	16898000			38511	1881	19034	19112	44633;44634;44635;44636	44634					0.13733282384794165
VLLGKVYVV	9	Unmodified	_VLLGKVYVV_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.3244506716728	2	495.323328	988.632104	2.3573	0.0011676	-0.23579	-0.00011679	2.1215	0.0010508	495.3231160267432	51.761	0.43028	52.087	51.85	52.28	0.32553					39	13	4	0	0	0	0.033794	3	21685	21639;21685;21744		81.613	41.656	1	20251000			38512	1881	19034	19112	44637;44638;44639	44638					0.13733282384794165
VLLGKVYVV	9	Unmodified	_VLLGKVYVV_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.3246337771416	2	495.323328	988.632104	2.4863	0.0012315	0.12089	5.9877E-05	2.6072	0.0012914	495.3233878541998	50.391	0.67562	51.785	51.551	52.226	1.3938					57	21	4	0	0	0	0.033794	4	21118	21033;21079;21118;21158		81.613	41.164	1	59535000			38513	1881	19034	19112	44640;44641;44642;44643	44642					0.13733282384794165
VLLGKVYVV	9	Unmodified	_VLLGKVYVV_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.3241454958916	2	495.323328	988.632104	1.6697	0.00082705	0.66096	0.00032739	2.3307	0.0011544	495.3236573137608	49.796	0.62124	51.773	51.537	52.159	1.9772					55	19	4	0	0	0	0.033794	4	20845	20808;20845;20884;20924		81.613	39.519	1	58037000			38514	1881	19034	19112	44644;44645;44646;44647	44645					0.13733282384794165
VLLGKVYVV	9	Unmodified	_VLLGKVYVV_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	495.323328	988.632104	1.4511	0.00071876	0.28089	0.00013913	1.732	0.00085789	495.3222848872631	50.258	0.15089	52.235	52.159	52.31	1.9772	0.016075	0.00029984	NaN	81.613	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	392800			38515	1881	19034	19112							0.13733282384794165
VLLGWLLVI	9	Unmodified	_VLLGWLLVI_					0	0	0		ENSG00000120451|ENST00000265909|SNX19;nc|ENSG00000120451|Q92543-2|SNX19	ENSG00000120451|ENST00000265909|SNX19	ENSG00000120451|ENST00000265909|SNX19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.3419677615166	2	513.341521	1024.66849	1.819	0.00093379	0.86992	0.00044657	2.689	0.0013804	513.3419480150426	79.704	0.49406	81.421	81.106	81.6	1.7167					29	15	3	0	0	0	0.24585	1	33417	33417		28.173	0	1	1014300			38516	2105	19035	19113	44648	44648					0.15714159281515094
VLLHALLLF	9	Unmodified	_VLLHALLLF_					0	0	0			REV__ENSG00000188352|ENST00000338382|FOCAD	REV__ENSG00000188352|ENST00000338382|FOCAD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1393920779228	2	519.839146	1037.66374	3.7316	0.0019398	2.7747	0.0014424	6.5063	0.0033822	520.3436100792103	81.645	0.30923	82.878	82.749	83.058	1.2332					14	9	2	0	0	0	0.116	1	34327	34327		5.2307	2.3415	1	476940	+		38517	11567	19036	19114	44649	44649					0.14641275138751553
VLLHALLLF	9	Unmodified	_VLLHALLLF_					0	0	0			REV__ENSG00000188352|ENST00000338382|FOCAD	REV__ENSG00000188352|ENST00000338382|FOCAD	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	519.839146	1037.66374	3.0822	0.0016022	1.3429	0.00069808	4.425	0.0023003	520.3423198029101	81.112	0.4345	82.808	82.671	83.106	1.6959	-0.034901	-0.0004569	NaN	5.2307	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	398160	+		38518	11567	19036	19114							0.14641275138751553
VLLHLLRRALL	11	Unmodified	_VLLHLLRRALL_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|201|1|anti-sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|192|1|anti-sense;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|190|1|anti-sense;chr8:91197524-91200613|99|17.84|0.22|6.31|+|0|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|50;chr3:195070111-195087933|297|11.33|0.27|5.37|-|1|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|71;chr3:189023348-189023750|247|10.3|0.01|9.43|+|1|TE_info:L1PA3,L1PA3_dup2320,L1,LINE,donor,-,189017230,189023348|None,TPRG1|83;chr15:53523322-53540662|224|18.24|0.17|6.76|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|74;chr8:127290060-127311920|177|24.08|0.02|9.95|-|0|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|11;chr8:127290060-127311835|201|15.36|0.0|11.84|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|11	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	329.9761840701103	4	329.977679	1315.88161	-2.4743	-0.00081645	-2.2722	-0.00074977	-4.7465	-0.0015662	330.227654417755	27.843	0.38644	27.843	27.622	28.009	0					30	12	3	0	0	0	1.0402	1	11646	11646		0.094841	0.094841	1	4138100			38519	206	19037	19115	44650	44650					0.23630465061228279
VLLHLLRRALL	11	Unmodified	_VLLHLLRRALL_					0	0	0		L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense;L1PA3_dup1321|chr2:173527290-173533317:-|3.203320537107827|0.2637255971055219|3.6|413.0|201|1|anti-sense;L1PA3_dup10510|chr20:40619323-40625356:+|1.448906025747238|0.1317034148076854|3.46|417.0|192|1|anti-sense;L1HS_dup1616|chr22:28663284-28669315:+|1.4529307293818696|0.2468976263073953|2.56|411.0|190|1|anti-sense;chr8:91197524-91200613|99|17.84|0.22|6.31|+|0|TE_info:L1PA3,L1PA3_dup5484,L1,LINE,donor,-,91191845,91197524|None,LRRC69|50;chr3:195070111-195087933|297|11.33|0.27|5.37|-|1|TE_info:L1PA2,L1PA2_dup1050,L1,LINE,donor,+,195087933,195093677|XXYLT1,None|71;chr3:189023348-189023750|247|10.3|0.01|9.43|+|1|TE_info:L1PA3,L1PA3_dup2320,L1,LINE,donor,-,189017230,189023348|None,TPRG1|83;chr15:53523322-53540662|224|18.24|0.17|6.76|-|0|TE_info:L1PA2,L1PA2_dup4399,L1,LINE,donor,+,53540662,53546677|WDR72,None|74;chr8:127290060-127311920|177|24.08|0.02|9.95|-|0|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311920,127315431|CASC8,None|11;chr8:127290060-127311835|201|15.36|0.0|11.84|-|2|TE_info:L1HS,L1HS_dup899,L1,LINE,donor,+,127311835,127315431|CASC8,None|11	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense	L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|253|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	329.9754821658134	4	329.977679	1315.88161	-2.4013	-0.00079236	-1.6532	-0.00054551	-4.0544	-0.0013379	329.9767532502263	29.432	0.58466	29.432	29.178	29.763	0					44	18	4	0	0	0	1.0402	1	12346	12346		0.094841	0.094841	1	1548300			38520	206	19037	19115	44651	44651					0.23630465061228279
VLLHRKPK	8	Unmodified	_VLLHRKPK_					0	0	0		nc|ENSG00000133059|Q6XUX3-4|DSTYK;nc|ENSG00000133059|Q6XUX3-2|DSTYK;ENSG00000133059|ENST00000367162|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	nc|ENSG00000133059|Q6XUX3-4|DSTYK	MSMS	GG20161007_CRH_Patient100_W632_02	4	495.8344604372978	2	495.832186	989.649819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.51	1	118.67	118.17	119.17	0.16237								0	0	0	1.0178	1	51160	51160		0.79363	0	1				38521	7873	19038	19116	44652	44652					0.15458042430316254
VLLIFLIYLD	10	Unmodified	_VLLIFLIYLD_					0	0	0		ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	MSMS	GG20161007_CRH_Patient100_A02_01	1	407.9208251833916	3	407.921292	1220.74205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.23237	1	0.23237	-0.26763	0.73237	0								0	0	0	0.66264	1	95	95		0	0	1				38522	4744	19039	19117	44653	44653					0.14050662933300373
VLLIFLIYLD	10	Unmodified	_VLLIFLIYLD_					0	0	0		ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	MSMS	GG20161007_CRH_Patient100_W632_01	3	407.9205810427666	3	407.921292	1220.74205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.17127	1	0.83866	0.33866	1.3387	0.66738								0	0	0	0.66264	1	70	70		0	0	1				38523	4744	19039	19117	44654	44654					0.14050662933300373
VLLIFLIYLD	10	Unmodified	_VLLIFLIYLD_					0	0	0		ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	ENSG00000185372|ENST00000641551|OR2V1	MSMS	GG20161007_CRH_Patient100_W632_01	3	407.9209472537041	3	407.921292	1220.74205	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.26746	1	0.93484	0.43484	1.4348	0.66738								0	0	0	0.66264	1	109	109		0	0	1				38524	4744	19039	19117	44655	44655					0.14050662933300373
VLLIVLIPWKK	11	Unmodified	_VLLIVLIPWKK_					0	0	0		ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4529907107353	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.85	1	115.85	115.35	116.35	0								0	0	0	0.63775	1	49984	49984		0	0	1				38525	4853	19040	19118	44656	44656					0.24210599257958165
VLLIVLIPWKK	11	Unmodified	_VLLIVLIPWKK_					0	0	0		ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4522582888603	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.12	1	116.12	115.62	116.62	0								0	0	0	0.63775	1	50099	50099		0	0	1				38526	4853	19040	19118	44657	44657					0.24210599257958165
VLLIVLIPWKK	11	Unmodified	_VLLIVLIPWKK_					0	0	0		ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	ENSG00000188211|ENST00000338965|NCR3LG1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4519531130791	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.8	1	116.8	116.3	117.3	0								0	0	0	0.63775	1	50375	50375		0	0	1				38527	4853	19040	19118	44658	44658					0.24210599257958165
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3688842654228	2	540.368601	1078.72265	1.2476	0.00067417	-1.7508	-0.00094606	-0.50316	-0.00027189	540.3677968461777	33.109	0.26217	33.109	32.971	33.233	0					16	9	2	0	0	0	0.47063	1	13855	13855		29.082	19.008	1	1447700			38528	3073	19041	19119	44659	44659					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	360.5815917849541	3	360.581493	1078.72265	-1.2563	-0.00045299	4.0603	0.0014641	2.8041	0.0010111	360.581974996748	33.069	1.0724	33.069	32.504	33.577	0					59	35	3	0	0	0	0.32206	1	13865	13865		32.037	20.52	1	8443600			38529	3073	19041	19119	44660	44660					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	360.5826599001884	3	360.581493	1078.72265	1.0012	0.000361	3.0708	0.0011073	4.072	0.0014683	360.5826694285529	32.458	0.36811	32.752	32.59	32.959	0.29431					27	11	3	0	0	0	0.35292	2	13606	13606;13664		30.703	18.463	1	4972700			38530	3073	19041	19119	44661;44662	44661					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3704101443291	2	540.368601	1078.72265	1.2814	0.0006924	1.5495	0.00083729	2.8308	0.0015297	540.3697181682676	32.429	0.27612	32.724	32.621	32.897	0.29431					15	8	3	0	0	0	0.38174	1	13625	13625		34.402	22.761	1	914210			38531	3073	19041	19119	44663	44663					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5822021365166	3	360.581493	1078.72265	-0.48657	-0.00017545	2.8437	0.0010254	2.3571	0.00084994	360.5824983400898	31.285	0.39815	32.566	32.375	32.773	1.2813					34	12	4	0	0	0	0.17319	3	13132	13082;13132;13176		37.075	24.9	1	9860400			38532	3073	19041	19119	44664;44665;44666	44665					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.3687011599541	2	540.368601	1078.72265	0.79007	0.00042693	0.51834	0.0002801	1.3084	0.00070703	540.3688108011162	31.279	0.24774	32.561	32.438	32.686	1.2813					13	7	2	0	0	0	0.38174	2	13148	13103;13148		34.402	22.761	1	1221100			38533	3073	19041	19119	44667;44668	44668					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5821716189384	3	360.581493	1078.72265	0.45622	0.00016451	1.5583	0.00056191	2.0146	0.00072642	360.5820923381777	30.693	0.4091	32.508	32.294	32.703	1.8151					36	13	4	0	0	0	0.17319	3	12878	12838;12878;12925		43.982	27.833	1	8440800			38534	3073	19041	19119	44669;44670;44671	44670					0.18643751433069156
VLLKARLVPA	10	Unmodified	_VLLKARLVPA_					0	0	0		ENSG00000144369|ENST00000304698|FAM171B;nc|ENSG00000144369|Q6P995-2|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	ENSG00000144369|ENST00000304698|FAM171B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3701660037041	2	540.368601	1078.72265	0.92096	0.00049766	0.69763	0.00037698	1.6186	0.00087464	540.3688612478068	30.698	0.28977	32.514	32.358	32.648	1.8151					18	9	3	0	0	0	0.19223	1	12871	12871		49.933	38.293	1	848920			38535	3073	19041	19119	44672	44672					0.18643751433069156
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3746826052666	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.7	1	118.7	118.2	119.2	0								0	0	0	0.42693	1	51138	51138		0	0	1		+		38536	14858	19042	19120	44673	44673					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3752319216728	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.96	1	118.96	118.46	119.46	0								0	0	0	0.42693	1	51245	51245		0	0	1		+		38537	14858	19042	19120	44674	44674					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.3737670779228	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.96	1	119.96	119.46	120.46	0								0	0	0	0.42693	1	51647	51647		0	0	1		+		38538	14858	19042	19120	44675	44675					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3747436404228	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.05	1	119.09	118.59	119.59	0.041039								0	0	0	0.42693	1	51127	51127		0	0	1		+		38539	14858	19042	19120	44676	44676					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3741332888603	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.26	1	119.3	118.8	119.8	0.041039								0	0	0	0.42693	1	51214	51214		0	0	1		+		38540	14858	19042	19120	44677	44677					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.3740112185478	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.82	1	119.86	119.36	120.36	0.041039								0	0	0	0.42693	1	51438	51438		0	0	1		+		38541	14858	19042	19120	44678	44678					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3749267458916	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.3	1	118.53	118.03	119.03	0.23128								0	0	0	0.42693	1	51141	51141		0	0	1		+		38542	14858	19042	19120	44679	44679					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3759033083916	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.61	1	118.84	118.34	119.34	0.23128								0	0	0	0.42693	1	51267	51267		0	0	1		+		38543	14858	19042	19120	44680	44680					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3746215701103	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.07	1	119.3	118.8	119.8	0.23128								0	0	0	0.42693	1	51451	51451		0	0	1		+		38544	14858	19042	19120	44681	44681					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3755981326103	2	529.372821	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.29	1	119.52	119.02	120.02	0.23128								0	0	0	0.42693	1	51541	51541		0	0	1		+		38545	14858	19042	19120	44682	44682					0.20499305349721908
VLLKIIVFL	9	Unmodified	_VLLKIIVFL_					0	0	0			REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	REV__tr|A0A553SIN6|A0A553SIN6_NIACISugarisomeraseOS=NialliacirculansOX=1397GN=CEQ21_15185PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	353.2509948611259	3	353.250973	1056.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.27	109.77	110.77	0.15228								0	0	0	0.42693	1	47766	47766		0	0	1		+		38546	14858	19042	19120	44683	44683					0.20499305349721908
VLLKKAKTLLL	11	Unmodified	_VLLKKAKTLLL_					0	0	0		nc|ENSG00000151835|Q9NZJ4-2|SACS;ENSG00000151835|ENST00000382292|SACS;SACS|p.V3288Tfs*46|1|0.07|ENSG00000151835|chr13:23334014-23334015|-/TGAAGGGATACTTTTTGTAAGTACGT|frameshift_variant;SACS|p.L2402Tfs*7|1|0.04|ENSG00000151835|chr13:23336672-23336673|-/T|frameshift_variant	nc|ENSG00000151835|Q9NZJ4-2|SACS	nc|ENSG00000151835|Q9NZJ4-2|SACS	MSMS	GG20161007_CRH_Patient100_W632_02	4	620.4426757693291	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.1	1	110.25	109.75	110.75	0.15228								0	0	0	0.63775	1	47757	47757		0	0	1				38547	3303	19043	19121	44684	44684					0.2591000887832706
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8165	1	1.8165	1.3165	2.3165	0								0	0	0	1.0178	1	745	745		0	0	1				38548	16465	19044	19122	44685	44685					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6661	1	3.6661	3.1661	4.1661	0								0	0	0	1.0178	1	1506	1506		0	0	1				38549	16465	19044	19122	44686	44686					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997375369072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7869	1	3.7869	3.2869	4.2869	0								0	0	0	1.0178	1	1555	1555		0	0	1				38550	16465	19044	19122	44687	44687					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8996459841728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9023	1	3.9023	3.4023	4.4023	0								0	0	0	1.0178	1	1603	1603		0	0	1				38551	16465	19044	19122	44688	44688					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0158	1	4.0158	3.5158	4.5158	0								0	0	0	1.0178	1	1650	1650		0	0	1				38552	16465	19044	19122	44689	44689					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3878	1	4.3878	3.8878	4.8878	0								0	0	0	1.0178	1	1803	1803		0	0	1				38553	16465	19044	19122	44690	44690					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3669	1	6.3669	5.8669	6.8669	0								0	0	0	1.0178	1	2614	2614		0	0	1				38554	16465	19044	19122	44691	44691					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5956	1	6.5956	6.0956	7.0956	0								0	0	0	1.0178	1	2709	2709		0	0	1				38555	16465	19044	19122	44692	44692					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8996459841728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9755	1	6.9755	6.4755	7.4755	0								0	0	0	1.0178	1	2866	2866		0	0	1				38556	16465	19044	19122	44693	44693					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8998596072197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4853	1	7.4853	6.9853	7.9853	0								0	0	0	1.0178	1	3077	3077		0	0	1				38557	16465	19044	19122	44694	44694					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.705	1	7.705	7.205	8.205	0								0	0	0	1.0178	1	3167	3167		0	0	1				38558	16465	19044	19122	44695	44695					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9001	1	7.9001	7.4001	8.4001	0								0	0	0	1.0178	1	3248	3248		0	0	1				38559	16465	19044	19122	44696	44696					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997375369072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9997	1	7.9997	7.4997	8.4997	0								0	0	0	1.0178	1	3289	3289		0	0	1				38560	16465	19044	19122	44697	44697					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997375369072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0992	1	8.0992	7.5992	8.5992	0								0	0	0	1.0178	1	3330	3330		0	0	1				38561	16465	19044	19122	44698	44698					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2258	1	8.2258	7.7258	8.7258	0								0	0	0	1.0178	1	3383	3383		0	0	1				38562	16465	19044	19122	44699	44699					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997680544853	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3547	1	8.3547	7.8547	8.8547	0								0	0	0	1.0178	1	3436	3436		0	0	1				38563	16465	19044	19122	44700	44700					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8998596072197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5023	1	8.5023	8.0023	9.0023	0								0	0	0	1.0178	1	3498	3498		0	0	1				38564	16465	19044	19122	44701	44701					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997375369072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6478	1	8.6478	8.1478	9.1478	0								0	0	0	1.0178	1	3558	3558		0	0	1				38565	16465	19044	19122	44702	44702					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8996459841728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7586	1	8.7586	8.2586	9.2586	0								0	0	0	1.0178	1	3604	3604		0	0	1				38566	16465	19044	19122	44703	44703					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8787	1	8.8787	8.3787	9.3787	0								0	0	0	1.0178	1	3654	3654		0	0	1				38567	16465	19044	19122	44704	44704					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997070193291	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9867	1	8.9867	8.4867	9.4867	0								0	0	0	1.0178	1	3698	3698		0	0	1				38568	16465	19044	19122	44705	44705					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0915	1	9.0915	8.5915	9.5915	0								0	0	0	1.0178	1	3742	3742		0	0	1				38569	16465	19044	19122	44706	44706					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1979	1	9.1979	8.6979	9.6979	0								0	0	0	1.0178	1	3786	3786		0	0	1				38570	16465	19044	19122	44707	44707					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3557	1	9.3557	8.8557	9.8557	0								0	0	0	1.0178	1	3851	3851		0	0	1				38571	16465	19044	19122	44708	44708					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.584	1	9.584	9.084	10.084	0								0	0	0	1.0178	1	3946	3946		0	0	1				38572	16465	19044	19122	44709	44709					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6874	1	9.6874	9.1874	10.187	0								0	0	0	1.0178	1	3988	3988		0	0	1				38573	16465	19044	19122	44710	44710					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.035	1	10.035	9.5353	10.535	0								0	0	0	1.0178	1	4135	4135		0	0	1				38574	16465	19044	19122	44711	44711					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.181	1	10.181	9.6814	10.681	0								0	0	0	1.0178	1	4197	4197		0	0	1				38575	16465	19044	19122	44712	44712					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.304	1	10.304	9.8044	10.804	0								0	0	0	1.0178	1	4248	4248		0	0	1				38576	16465	19044	19122	44713	44713					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.436	1	10.436	9.9362	10.936	0								0	0	0	1.0178	1	4303	4303		0	0	1				38577	16465	19044	19122	44714	44714					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.56	1	10.56	10.06	11.06	0								0	0	0	1.0178	1	4355	4355		0	0	1				38578	16465	19044	19122	44715	44715					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997680544853	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.673	1	10.673	10.173	11.173	0								0	0	0	1.0178	1	4403	4403		0	0	1				38579	16465	19044	19122	44716	44716					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8996765017509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.876	1	10.876	10.376	11.376	0								0	0	0	1.0178	1	4489	4489		0	0	1				38580	16465	19044	19122	44717	44717					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.994	1	10.994	10.494	11.494	0								0	0	0	1.0178	1	4539	4539		0	0	1				38581	16465	19044	19122	44718	44718					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.117	1	11.117	10.617	11.617	0								0	0	0	1.0178	1	4591	4591		0	0	1				38582	16465	19044	19122	44719	44719					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.299	1	11.299	10.799	11.799	0								0	0	0	1.0178	1	4667	4667		0	0	1				38583	16465	19044	19122	44720	44720					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.417	1	12.417	11.917	12.917	0								0	0	0	1.0178	1	5137	5137		0	0	1				38584	16465	19044	19122	44721	44721					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.532	1	12.532	12.032	13.032	0								0	0	0	1.0178	1	5186	5186		0	0	1				38585	16465	19044	19122	44722	44722					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.657	1	12.657	12.157	13.157	0								0	0	0	1.0178	1	5239	5239		0	0	1				38586	16465	19044	19122	44723	44723					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.968	1	12.968	12.468	13.468	0								0	0	0	1.0178	1	5371	5371		0	0	1				38587	16465	19044	19122	44724	44724					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001647830009	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.117	1	13.117	12.617	13.617	0								0	0	0	1.0178	1	5433	5433		0	0	1				38588	16465	19044	19122	44725	44725					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.457	1	13.457	12.957	13.957	0								0	0	0	1.0178	1	5576	5576		0	0	1				38589	16465	19044	19122	44726	44726					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.578	1	13.578	13.078	14.078	0								0	0	0	1.0178	1	5627	5627		0	0	1				38590	16465	19044	19122	44727	44727					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999816775322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.705	1	13.705	13.205	14.205	0								0	0	0	1.0178	1	5681	5681		0	0	1				38591	16465	19044	19122	44728	44728					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.826	1	13.826	13.326	14.326	0								0	0	0	1.0178	1	5732	5732		0	0	1				38592	16465	19044	19122	44729	44729					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.979	1	13.979	13.479	14.479	0								0	0	0	1.0178	1	5797	5797		0	0	1				38593	16465	19044	19122	44730	44730					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.108	1	14.108	13.608	14.608	0								0	0	0	1.0178	1	5852	5852		0	0	1				38594	16465	19044	19122	44731	44731					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.224	1	14.224	13.724	14.724	0								0	0	0	1.0178	1	5900	5900		0	0	1				38595	16465	19044	19122	44732	44732					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.475	1	14.475	13.975	14.975	0								0	0	0	1.0178	1	6006	6006		0	0	1				38596	16465	19044	19122	44733	44733					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.607	1	14.607	14.107	15.107	0								0	0	0	1.0178	1	6061	6061		0	0	1				38597	16465	19044	19122	44734	44734					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007446169853	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.715	1	14.715	14.215	15.215	0								0	0	0	1.0178	1	6107	6107		0	0	1				38598	16465	19044	19122	44735	44735					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.842	1	14.842	14.342	15.342	0								0	0	0	1.0178	1	6160	6160		0	0	1				38599	16465	19044	19122	44736	44736					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.966	1	14.966	14.466	15.466	0								0	0	0	1.0178	1	6212	6212		0	0	1				38600	16465	19044	19122	44737	44737					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.25	1	15.25	14.75	15.75	0								0	0	0	1.0178	1	6330	6330		0	0	1				38601	16465	19044	19122	44738	44738					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.385	1	15.385	14.885	15.885	0								0	0	0	1.0178	1	6386	6386		0	0	1				38602	16465	19044	19122	44739	44739					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.497	1	15.497	14.997	15.997	0								0	0	0	1.0178	1	6434	6434		0	0	1				38603	16465	19044	19122	44740	44740					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999816775322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.086	1	16.086	15.586	16.586	0								0	0	0	1.0178	1	6680	6680		0	0	1				38604	16465	19044	19122	44741	44741					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000427126884	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.223	1	16.223	15.723	16.723	0								0	0	0	1.0178	1	6736	6736		0	0	1				38605	16465	19044	19122	44742	44742					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.342	1	16.342	15.842	16.842	0								0	0	0	1.0178	1	6785	6785		0	0	1				38606	16465	19044	19122	44743	44743					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.473	1	16.473	15.973	16.973	0								0	0	0	1.0178	1	6838	6838		0	0	1				38607	16465	19044	19122	44744	44744					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.597	1	16.597	16.097	17.097	0								0	0	0	1.0178	1	6890	6890		0	0	1				38608	16465	19044	19122	44745	44745					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.725	1	16.725	16.225	17.225	0								0	0	0	1.0178	1	6942	6942		0	0	1				38609	16465	19044	19122	44746	44746					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.855	1	16.855	16.355	17.355	0								0	0	0	1.0178	1	6996	6996		0	0	1				38610	16465	19044	19122	44747	44747					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001647830009	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.971	1	16.971	16.471	17.471	0								0	0	0	1.0178	1	7044	7044		0	0	1				38611	16465	19044	19122	44748	44748					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.102	1	17.102	16.602	17.602	0								0	0	0	1.0178	1	7099	7099		0	0	1				38612	16465	19044	19122	44749	44749					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.222	1	17.222	16.722	17.722	0								0	0	0	1.0178	1	7148	7148		0	0	1				38613	16465	19044	19122	44750	44750					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.343	1	17.343	16.843	17.843	0								0	0	0	1.0178	1	7199	7199		0	0	1				38614	16465	19044	19122	44751	44751					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.464	1	17.464	16.964	17.964	0								0	0	0	1.0178	1	7250	7250		0	0	1				38615	16465	19044	19122	44752	44752					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.592	1	17.592	17.092	18.092	0								0	0	0	1.0178	1	7304	7304		0	0	1				38616	16465	19044	19122	44753	44753					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.751	1	17.751	17.251	18.251	0								0	0	0	1.0178	1	7371	7371		0	0	1				38617	16465	19044	19122	44754	44754					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.998	1	17.998	17.498	18.498	0								0	0	0	1.0178	1	7474	7474		0	0	1				38618	16465	19044	19122	44755	44755					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8993102908134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.123	1	18.123	17.623	18.623	0								0	0	0	1.0178	1	7527	7527		0	0	1				38619	16465	19044	19122	44756	44756					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8996459841728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.709	1	18.709	18.209	19.209	0								0	0	0	1.0178	1	7777	7777		0	0	1				38620	16465	19044	19122	44757	44757					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001647830009	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.789	1	19.789	19.289	20.289	0								0	0	0	1.0178	1	8224	8224		0	0	1				38621	16465	19044	19122	44758	44758					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.04	1	20.04	19.54	20.54	0								0	0	0	1.0178	1	8329	8329		0	0	1				38622	16465	19044	19122	44759	44759					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.634	1	20.634	20.134	21.134	0								0	0	0	1.0178	1	8578	8578		0	0	1				38623	16465	19044	19122	44760	44760					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.79	1	20.79	20.29	21.29	0								0	0	0	1.0178	1	8643	8643		0	0	1				38624	16465	19044	19122	44761	44761					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006835818291	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.91	1	20.91	20.41	21.41	0								0	0	0	1.0178	1	8693	8693		0	0	1				38625	16465	19044	19122	44762	44762					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.551	1	22.551	22.051	23.051	0								0	0	0	1.0178	1	9384	9384		0	0	1				38626	16465	19044	19122	44763	44763					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.105	1	25.105	24.605	25.605	0								0	0	0	1.0178	1	10476	10476		0	0	1				38627	16465	19044	19122	44764	44764					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.381	1	25.381	24.881	25.881	0								0	0	0	1.0178	1	10592	10592		0	0	1				38628	16465	19044	19122	44765	44765					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.006	1	26.006	25.506	26.506	0								0	0	0	1.0178	1	10856	10856		0.45834	0	1				38629	16465	19044	19122	44766	44766					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.235	1	26.235	25.735	26.735	0								0	0	0	1.0178	1	10955	10955		0	0	1				38630	16465	19044	19122	44767	44767					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.37	1	26.37	25.87	26.87	0								0	0	0	1.0178	1	11013	11013		0	0	1				38631	16465	19044	19122	44768	44768					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.476	1	26.476	25.976	26.976	0								0	0	0	1.0178	1	11060	11060		0	0	1				38632	16465	19044	19122	44769	44769					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.842	1	26.842	26.342	27.342	0								0	0	0	1.0178	1	11220	11220		0	0	1				38633	16465	19044	19122	44770	44770					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.281	1	34.281	33.781	34.781	0								0	0	0	1.0178	1	14370	14370		0	0	1				38634	16465	19044	19122	44771	44771					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8997985720634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.595	1	57.595	57.095	58.095	0								0	0	0	1.0178	1	24035	24035		0	0	1				38635	16465	19044	19122	44772	44772					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.212	1	58.212	57.712	58.712	0								0	0	0	1.0178	1	24285	24285		0	0	1				38636	16465	19044	19122	44773	44773					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9012634158134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.586	1	58.586	58.086	59.086	0								0	0	0	1.0178	1	24436	24436		0	0	1				38637	16465	19044	19122	44774	44774					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008666872978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.383	1	59.383	58.883	59.883	0								0	0	0	1.0178	1	24761	24761		0	0	1				38638	16465	19044	19122	44775	44775					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.51	1	59.51	59.01	60.01	0								0	0	0	1.0178	1	24814	24814		0	0	1				38639	16465	19044	19122	44776	44776					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.362	1	65.362	64.862	65.862	0								0	0	0	1.0178	1	27240	27240		0	0	1				38640	16465	19044	19122	44777	44777					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.517	1	65.517	65.017	66.017	0								0	0	0	1.0178	1	27303	27303		0	0	1				38641	16465	19044	19122	44778	44778					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.788	1	65.788	65.288	66.288	0								0	0	0	1.0178	1	27411	27411		0	0	1				38642	16465	19044	19122	44779	44779					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.911	1	65.911	65.411	66.411	0								0	0	0	1.0178	1	27463	27463		0	0	1				38643	16465	19044	19122	44780	44780					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.59	1	66.59	66.09	67.09	0								0	0	0	1.0178	1	27736	27736		0	0	1				38644	16465	19044	19122	44781	44781					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.809	1	66.809	66.309	67.309	0								0	0	0	1.0178	1	27826	27826		0	0	1				38645	16465	19044	19122	44782	44782					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.034	1	67.034	66.534	67.534	0								0	0	0	1.0178	1	27917	27917		0	0	1				38646	16465	19044	19122	44783	44783					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8994323611259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.283	1	67.283	66.783	67.783	0								0	0	0	1.0178	1	28025	28025		0	0	1				38647	16465	19044	19122	44784	44784					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.413	1	67.413	66.913	67.913	0								0	0	0	1.0178	1	28080	28080		0	0	1				38648	16465	19044	19122	44785	44785					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.566	1	67.566	67.066	68.066	0								0	0	0	1.0178	1	28142	28142		0	0	1				38649	16465	19044	19122	44786	44786					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.73	1	67.73	67.23	68.23	0								0	0	0	1.0178	1	28210	28210		0	0	1				38650	16465	19044	19122	44787	44787					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.914	1	67.914	67.414	68.414	0								0	0	0	1.0178	1	28286	28286		0	0	1				38651	16465	19044	19122	44788	44788					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007446169853	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.089	1	68.089	67.589	68.589	0								0	0	0	1.0178	1	28357	28357		0	0	1				38652	16465	19044	19122	44789	44789					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.232	1	68.232	67.732	68.732	0								0	0	0	1.0178	1	28416	28416		0	0	1				38653	16465	19044	19122	44790	44790					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.769	1	68.769	68.269	69.269	0								0	0	0	1.0178	1	28638	28638		0	0	1				38654	16465	19044	19122	44791	44791					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.997	1	68.997	68.497	69.497	0								0	0	0	1.0178	1	28733	28733		0	0	1				38655	16465	19044	19122	44792	44792					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008666872978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.118	1	69.118	68.618	69.618	0								0	0	0	1.0178	1	28784	28784		0	0	1				38656	16465	19044	19122	44793	44793					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.243	1	69.243	68.743	69.743	0								0	0	0	1.0178	1	28836	28836		0	0	1				38657	16465	19044	19122	44794	44794					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9009582400322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.431	1	69.431	68.931	69.931	0								0	0	0	1.0178	1	28915	28915		0	0	1				38658	16465	19044	19122	44795	44795					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.582	1	69.582	69.082	70.082	0								0	0	0	1.0178	1	28977	28977		0	0	1				38659	16465	19044	19122	44796	44796					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.708	1	69.708	69.208	70.208	0								0	0	0	1.0178	1	29028	29028		0	0	1				38660	16465	19044	19122	44797	44797					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.1	1	70.1	69.6	70.6	0								0	0	0	1.0178	1	29189	29189		0	0	1				38661	16465	19044	19122	44798	44798					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.221	1	70.221	69.721	70.721	0								0	0	0	1.0178	1	29240	29240		0	0	1				38662	16465	19044	19122	44799	44799					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8998290896416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.346	1	70.346	69.846	70.846	0								0	0	0	1.0178	1	29293	29293		0	0	1				38663	16465	19044	19122	44800	44800					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.255	1	77.255	76.755	77.755	0								0	0	0	1.0178	1	32161	32161		0	0	1				38664	16465	19044	19122	44801	44801					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.812	1	77.812	77.312	78.312	0								0	0	0	1.0178	1	32394	32394		0	0	1				38665	16465	19044	19122	44802	44802					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001037478447	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.007	1	78.007	77.507	78.507	0								0	0	0	1.0178	1	32474	32474		0	0	1				38666	16465	19044	19122	44803	44803					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.32	1	78.32	77.82	78.82	0								0	0	0	1.0178	1	32604	32604		0	0	1				38667	16465	19044	19122	44804	44804					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.441	1	78.441	77.941	78.941	0								0	0	0	1.0178	1	32653	32653		0	0	1				38668	16465	19044	19122	44805	44805					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.608	1	78.608	78.108	79.108	0								0	0	0	1.0178	1	32723	32723		0	0	1				38669	16465	19044	19122	44806	44806					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.335	1	79.335	78.835	79.835	0								0	0	0	1.0178	1	33034	33034		0	0	1				38670	16465	19044	19122	44807	44807					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.527	1	79.527	79.027	80.027	0								0	0	0	1.0178	1	33114	33114		0	0	1				38671	16465	19044	19122	44808	44808					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008361697197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.802	1	79.802	79.302	80.302	0								0	0	0	1.0178	1	33228	33228		0	0	1				38672	16465	19044	19122	44809	44809					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8995544314384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.955	1	79.955	79.455	80.455	0								0	0	0	1.0178	1	33294	33294		0	0	1				38673	16465	19044	19122	44810	44810					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9009887576103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.268	1	80.268	79.768	80.768	0								0	0	0	1.0178	1	33425	33425		0	0	1				38674	16465	19044	19122	44811	44811					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.453	1	80.453	79.953	80.953	0								0	0	0	1.0178	1	33501	33501		0	0	1				38675	16465	19044	19122	44812	44812					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007140994072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.688	1	80.688	80.188	81.188	0								0	0	0	1.0178	1	33599	33599		0	0	1				38676	16465	19044	19122	44813	44813					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.803	1	80.803	80.303	81.303	0								0	0	0	1.0178	1	33646	33646		0	0	1				38677	16465	19044	19122	44814	44814					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9009887576103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.391	1	81.391	80.891	81.891	0								0	0	0	1.0178	1	33893	33893		0	0	1				38678	16465	19044	19122	44815	44815					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008361697197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.999	1	81.999	81.499	82.499	0								0	0	0	1.0178	1	34158	34158		0	0	1				38679	16465	19044	19122	44816	44816					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.32	1	82.32	81.82	82.82	0								0	0	0	1.0178	1	34294	34294		0	0	1				38680	16465	19044	19122	44817	44817					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.563	1	82.563	82.063	83.063	0								0	0	0	1.0178	1	34396	34396		0	0	1				38681	16465	19044	19122	44818	44818					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007140994072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.71	1	82.71	82.21	83.21	0								0	0	0	1.0178	1	34459	34459		0	0	1				38682	16465	19044	19122	44819	44819					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.833	1	82.833	82.333	83.333	0								0	0	0	1.0178	1	34511	34511		0	0	1				38683	16465	19044	19122	44820	44820					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.952	1	82.952	82.452	83.452	0								0	0	0	1.0178	1	34561	34561		0	0	1				38684	16465	19044	19122	44821	44821					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.169	1	83.169	82.669	83.669	0								0	0	0	1.0178	1	34653	34653		0	0	1				38685	16465	19044	19122	44822	44822					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.42	1	83.42	82.92	83.92	0								0	0	0	1.0178	1	34760	34760		0	0	1				38686	16465	19044	19122	44823	44823					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.607	1	83.607	83.107	84.107	0								0	0	0	1.0178	1	34839	34839		0	0	1				38687	16465	19044	19122	44824	44824					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007751345634	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.621	1	84.621	84.121	85.121	0								0	0	0	1.0178	1	35263	35263		0	0	1				38688	16465	19044	19122	44825	44825					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.812	1	84.812	84.312	85.312	0								0	0	0	1.0178	1	35341	35341		0	0	1				38689	16465	19044	19122	44826	44826					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.978	1	84.978	84.478	85.478	0								0	0	0	1.0178	1	35409	35409		0	0	1				38690	16465	19044	19122	44827	44827					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.173	1	85.173	84.673	85.673	0								0	0	0	1.0178	1	35488	35488		0	0	1				38691	16465	19044	19122	44828	44828					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.769	1	85.769	85.269	86.269	0								0	0	0	1.0178	1	35736	35736		0	0	1				38692	16465	19044	19122	44829	44829					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.241	1	91.241	90.741	91.741	0								0	0	0	1.0178	1	38133	38133		0	0	1				38693	16465	19044	19122	44830	44830					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.558	1	92.558	92.058	93.058	0								0	0	0	1.0178	1	38682	38682		0	0	1				38694	16465	19044	19122	44831	44831					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.953	1	92.953	92.453	93.453	0								0	0	0	1.0178	1	38851	38851		0	0	1				38695	16465	19044	19122	44832	44832					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.079	1	93.079	92.579	93.579	0								0	0	0	1.0178	1	38905	38905		0	0	1				38696	16465	19044	19122	44833	44833					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9007140994072	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.201	1	93.201	92.701	93.701	0								0	0	0	1.0178	1	38955	38955		0	0	1				38697	16465	19044	19122	44834	44834					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94	1	94	93.5	94.5	0								0	0	0	1.0178	1	39283	39283		0	0	1				38698	16465	19044	19122	44835	44835					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9008666872978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.733	1	94.733	94.233	95.233	0								0	0	0	1.0178	1	39592	39592		0	0	1				38699	16465	19044	19122	44836	44836					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9009582400322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.882	1	94.882	94.382	95.382	0								0	0	0	1.0178	1	39654	39654		0	0	1				38700	16465	19044	19122	44837	44837					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9015380740166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.058	1	95.058	94.558	95.558	0								0	0	0	1.0178	1	39726	39726		0	0	1				38701	16465	19044	19122	44838	44838					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.48	1	113.48	112.98	113.98	0								0	0	0	1.0178	1	49024	49024		0	0	1				38702	16465	19044	19122	44839	44839					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.96	1	113.96	113.46	114.46	0								0	0	0	1.0178	1	49219	49219		0	0	1				38703	16465	19044	19122	44840	44840					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.75	1	117.75	117.25	118.25	0								0	0	0	1.0178	1	50759	50759		0	0	1				38704	16465	19044	19122	44841	44841					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998290896416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8139	1	3.9158	3.4158	4.4158	0.10199								0	0	0	1.0178	1	1574	1574		0	0	1				38705	16465	19044	19122	44842	44842					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.106	1	9.1823	8.6823	9.6823	0.07632								0	0	0	1.0178	1	3772	3772		0	0	1				38706	16465	19044	19122	44843	44843					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998596072197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.216	1	9.2935	8.7935	9.7935	0.077433								0	0	0	1.0178	1	3818	3818		0	0	1				38707	16465	19044	19122	44844	44844					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8996154665947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5353	1	9.6133	9.1133	10.113	0.077971								0	0	0	1.0178	1	3951	3951		0	0	1				38708	16465	19044	19122	44845	44845					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8995239138603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.867	1	9.945	9.445	10.445	0.077971								0	0	0	1.0178	1	4089	4089		0	0	1				38709	16465	19044	19122	44846	44846					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999206423759	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.176	1	10.254	9.7539	10.754	0.077971								0	0	0	1.0178	1	4219	4219		0	0	1				38710	16465	19044	19122	44847	44847					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.453	1	10.535	10.035	11.035	0.082325								0	0	0	1.0178	1	4335	4335		0	0	1				38711	16465	19044	19122	44848	44848					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8994933962822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.007	1	11.089	10.589	11.589	0.082325								0	0	0	1.0178	1	4566	4566		0	0	1				38712	16465	19044	19122	44849	44849					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.134	1	11.217	10.717	11.717	0.082325								0	0	0	1.0178	1	4619	4619		0	0	1				38713	16465	19044	19122	44850	44850					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.695	1	11.785	11.285	12.285	0.089381								0	0	0	1.0178	1	4853	4853		0	0	1				38714	16465	19044	19122	44851	44851					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8991271853447	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.384	1	12.474	11.974	12.974	0.089381								0	0	0	1.0178	1	5139	5139		0	0	1				38715	16465	19044	19122	44852	44852					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.538	1	12.628	12.128	13.128	0.089381								0	0	0	1.0178	1	5204	5204		0	0	1				38716	16465	19044	19122	44853	44853					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.695	1	12.785	12.285	13.285	0.089381								0	0	0	1.0178	1	5270	5270		0	0	1				38717	16465	19044	19122	44854	44854					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999816775322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.829	1	12.928	12.428	13.428	0.09944								0	0	0	1.0178	1	5326	5326		0	0	1				38718	16465	19044	19122	44855	44855					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9000427126884	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.187	1	13.286	12.786	13.786	0.09944								0	0	0	1.0178	1	5473	5473		0	0	1				38719	16465	19044	19122	44856	44856					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001037478447	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.37	1	13.47	12.97	13.97	0.09944								0	0	0	1.0178	1	5548	5548		0	0	1				38720	16465	19044	19122	44857	44857					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.531	1	13.63	13.13	14.13	0.09944								0	0	0	1.0178	1	5615	5615		0	0	1				38721	16465	19044	19122	44858	44858					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9000732302666	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.744	1	13.844	13.344	14.344	0.09944								0	0	0	1.0178	1	5703	5703		0	0	1				38722	16465	19044	19122	44859	44859					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.987	1	14.086	13.586	14.586	0.09944								0	0	0	1.0178	1	5804	5804		0	0	1				38723	16465	19044	19122	44860	44860					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.115	1	14.228	13.728	14.728	0.11295								0	0	0	1.0178	1	5856	5856		0	0	1				38724	16465	19044	19122	44861	44861					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9009582400322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.276	1	14.389	13.889	14.889	0.11295								0	0	0	1.0178	1	5923	5923		0	0	1				38725	16465	19044	19122	44862	44862					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.406	1	14.519	14.019	15.019	0.11295								0	0	0	1.0178	1	5977	5977		0	0	1				38726	16465	19044	19122	44863	44863					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.583	1	14.696	14.196	15.196	0.11295								0	0	0	1.0178	1	6051	6051		0	0	1				38727	16465	19044	19122	44864	44864					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.72	1	14.833	14.333	15.333	0.11295								0	0	0	1.0178	1	6108	6108		0	0	1				38728	16465	19044	19122	44865	44865					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8994933962822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.868	1	14.981	14.481	15.481	0.11295								0	0	0	1.0178	1	6170	6170		0	0	1				38729	16465	19044	19122	44866	44866					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001647830009	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.314	1	15.444	14.944	15.944	0.13022								0	0	0	1.0178	1	6356	6356		0	0	1				38730	16465	19044	19122	44867	44867					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.96	1	16.09	15.59	16.59	0.13022								0	0	0	1.0178	1	6624	6624		0	0	1				38731	16465	19044	19122	44868	44868					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.995	1	23.228	22.728	23.728	0.23306								0	0	0	1.0178	1	9591	9591		0	0	1				38732	16465	19044	19122	44869	44869					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.117	1	23.35	22.85	23.85	0.23306								0	0	0	1.0178	1	9641	9641		0	0	1				38733	16465	19044	19122	44870	44870					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.243	1	23.476	22.976	23.976	0.23306								0	0	0	1.0178	1	9692	9692		0	0	1				38734	16465	19044	19122	44871	44871					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.353	1	23.586	23.086	24.086	0.23306								0	0	0	1.0178	1	9739	9739		0	0	1				38735	16465	19044	19122	44872	44872					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8998596072197	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.553	1	23.786	23.286	24.286	0.23306								0	0	0	1.0178	1	9823	9823		0	0	1				38736	16465	19044	19122	44873	44873					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8999816775322	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.676	1	23.918	23.418	24.418	0.24251								0	0	0	1.0178	1	9874	9874		0	0	1				38737	16465	19044	19122	44874	44874					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.809	1	24.051	23.551	24.551	0.24251								0	0	0	1.0178	1	9929	9929		0	0	1				38738	16465	19044	19122	44875	44875					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.064	1	25.316	24.816	25.816	0.25197								0	0	0	1.0178	1	10463	10463		0	0	1				38739	16465	19044	19122	44876	44876					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.579	1	25.831	25.331	26.331	0.25197								0	0	0	1.0178	1	10681	10681		0	0	1				38740	16465	19044	19122	44877	44877					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.71	1	25.962	25.462	26.462	0.25197								0	0	0	1.0178	1	10736	10736		0	0	1				38741	16465	19044	19122	44878	44878					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.886	1	26.137	25.637	26.637	0.25197								0	0	0	1.0178	1	10811	10811		0	0	1				38742	16465	19044	19122	44879	44879					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.684	1	30.97	30.47	31.47	0.2859								0	0	0	1.0178	1	12869	12869		0	0	1				38743	16465	19044	19122	44880	44880					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9007446169853	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.46	1	53.783	53.283	54.283	0.32283								0	0	0	1.0178	1	22393	22393		0	0	1				38744	16465	19044	19122	44881	44881					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001342654228	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.685	1	54.008	53.508	54.508	0.32283								0	0	0	1.0178	1	22487	22487		0	0	1				38745	16465	19044	19122	44882	44882					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.843	1	54.164	53.664	54.664	0.32088								0	0	0	1.0178	1	22553	22553		0	0	1				38746	16465	19044	19122	44883	44883					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002258181572	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.437	1	54.758	54.258	55.258	0.32088								0	0	0	1.0178	1	22796	22796		0	0	1				38747	16465	19044	19122	44884	44884					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.234	1	65.561	65.061	66.061	0.32689								0	0	0	1.0178	1	27318	27318		0	0	1				38748	16465	19044	19122	44885	44885					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9008666872978	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.614	1	65.941	65.441	66.441	0.32689								0	0	0	1.0178	1	27473	27473		0	0	1				38749	16465	19044	19122	44886	44886					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.731	1	66.058	65.558	66.558	0.32689								0	0	0	1.0178	1	27522	27522		0	0	1				38750	16465	19044	19122	44887	44887					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.979	1	66.304	65.804	66.804	0.32449								0	0	0	1.0178	1	27624	27624		0	0	1				38751	16465	19044	19122	44888	44888					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.429	1	66.753	66.253	67.253	0.32449								0	0	0	1.0178	1	27808	27808		0	0	1				38752	16465	19044	19122	44889	44889					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.579	1	66.903	66.403	67.403	0.32449								0	0	0	1.0178	1	27870	27870		0	0	1				38753	16465	19044	19122	44890	44890					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9015991091728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.783	1	67.107	66.607	67.607	0.32449								0	0	0	1.0178	1	27954	27954		0	0	1				38754	16465	19044	19122	44891	44891					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.898	1	67.222	66.722	67.722	0.32449								0	0	0	1.0178	1	28003	28003		0	0	1				38755	16465	19044	19122	44892	44892					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.8990661501884	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.052	1	67.375	66.875	67.875	0.32269								0	0	0	1.0178	1	28069	28069		0	0	1				38756	16465	19044	19122	44893	44893					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.262	1	67.585	67.085	68.085	0.32269								0	0	0	1.0178	1	28163	28163		0	0	1				38757	16465	19044	19122	44894	44894					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.38	1	67.703	67.203	68.203	0.32269								0	0	0	1.0178	1	28211	28211		0	0	1				38758	16465	19044	19122	44895	44895					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.518	1	67.84	67.34	68.34	0.32269								0	0	0	1.0178	1	28269	28269		0	0	1				38759	16465	19044	19122	44896	44896					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.705	1	68.027	67.527	68.527	0.32269								0	0	0	1.0178	1	28346	28346		0	0	1				38760	16465	19044	19122	44897	44897					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.124	1	68.447	67.947	68.947	0.32269								0	0	0	1.0178	1	28517	28517		0	0	1				38761	16465	19044	19122	44898	44898					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.249	1	68.572	68.072	69.072	0.32224								0	0	0	1.0178	1	28569	28569		0	0	1				38762	16465	19044	19122	44899	44899					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.461	1	68.784	68.284	69.284	0.32224								0	0	0	1.0178	1	28658	28658		0	0	1				38763	16465	19044	19122	44900	44900					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.61	1	68.932	68.432	69.432	0.32224								0	0	0	1.0178	1	28721	28721		0	0	1				38764	16465	19044	19122	44901	44901					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9003478884697	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.873	1	69.195	68.695	69.695	0.32224								0	0	0	1.0178	1	28829	28829		0	0	1				38765	16465	19044	19122	44902	44902					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005920290947	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.034	1	69.356	68.856	69.856	0.32224								0	0	0	1.0178	1	28896	28896		0	0	1				38766	16465	19044	19122	44903	44903					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.146	1	69.468	68.968	69.968	0.32224								0	0	0	1.0178	1	28943	28943		0	0	1				38767	16465	19044	19122	44904	44904					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9008056521416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.285	1	69.607	69.107	70.107	0.32224								0	0	0	1.0178	1	29001	29001		0	0	1				38768	16465	19044	19122	44905	44905					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9010192751884	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.441	1	69.764	69.264	70.264	0.32224								0	0	0	1.0178	1	29065	29065		0	0	1				38769	16465	19044	19122	44906	44906					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.559	1	69.881	69.381	70.381	0.32224								0	0	0	1.0178	1	29114	29114		0	0	1				38770	16465	19044	19122	44907	44907					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004089236259	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.745	1	70.067	69.567	70.567	0.32224								0	0	0	1.0178	1	29191	29191		0	0	1				38771	16465	19044	19122	44908	44908					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9004699587822	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.238	1	79.538	79.038	80.038	0.30047								0	0	0	1.0178	1	33132	33132		0	0	1				38772	16465	19044	19122	44909	44909					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9005309939384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.365	1	79.666	79.166	80.166	0.30047								0	0	0	1.0178	1	33184	33184		0	0	1				38773	16465	19044	19122	44910	44910					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9008056521416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.653	1	79.953	79.453	80.453	0.30047								0	0	0	1.0178	1	33301	33301		0	0	1				38774	16465	19044	19122	44911	44911					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9008056521416	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.805	1	80.106	79.606	80.606	0.30047								0	0	0	1.0178	1	33364	33364		0	0	1				38775	16465	19044	19122	44912	44912					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.029	1	80.33	79.83	80.83	0.30047								0	0	0	1.0178	1	33456	33456		0	0	1				38776	16465	19044	19122	44913	44913					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.532	1	80.822	80.322	81.322	0.29056								0	0	0	1.0178	1	33666	33666		0	0	1				38777	16465	19044	19122	44914	44914					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8995239138603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7854	1	9.4219	8.9219	9.9219	0.63651								0	0	0	1.0178	1	3647	3647		0	0	1				38778	16465	19044	19122	44915	44915					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8995544314384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0769	1	9.7134	9.2134	10.213	0.63651								0	0	0	1.0178	1	3770	3770		0	0	1				38779	16465	19044	19122	44916	44916					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8992797732353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.824	1	11.493	10.993	11.993	0.66934								0	0	0	1.0178	1	4500	4500		0	0	1				38780	16465	19044	19122	44917	44917					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8995849490166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.047	1	11.716	11.216	12.216	0.66934								0	0	0	1.0178	1	4591	4591		0	0	1				38781	16465	19044	19122	44918	44918					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8996765017509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.261	1	13.988	13.488	14.488	0.72639								0	0	0	1.0178	1	5506	5506		0	0	1				38782	16465	19044	19122	44919	44919					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9002868533134	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.911	1	14.638	14.138	15.138	0.72639								0	0	0	1.0178	1	5778	5778		0	0	1				38783	16465	19044	19122	44920	44920					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9002563357353	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.116	1	23.293	22.793	23.793	1.177								0	0	0	1.0178	1	9242	9242		0	0	1				38784	16465	19044	19122	44921	44921					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9006225466728	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.242	1	23.419	22.919	23.919	1.177								0	0	0	1.0178	1	9296	9296		0	0	1				38785	16465	19044	19122	44922	44922					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9000427126884	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.368	1	23.544	23.044	24.044	1.177								0	0	0	1.0178	1	9347	9347		0	0	1				38786	16465	19044	19122	44923	44923					0.2134334728691556
VLLKLLLI	8	Unmodified	_VLLKLLLI_					0	0	0		tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	tr|A0A553SPF1|A0A553SPF1_NIACIMechanosensitiveionchannelfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_26255PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.9005004763603	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.772	1	68.161	67.661	68.661	1.3888								0	0	0	1.0178	1	28011	28011		0	0	1				38787	16465	19044	19122	44924	44924					0.2134334728691556
VLLKMGHA	8	Unmodified	_VLLKMGHA_					0	0	0			REV__tr|A0A553SFA5|A0A553SFA5_NIACIArabinogalactanendo-beta-1,4-galactanaseOS=NialliacirculansOX=1397GN=CEQ21_08370PE=3SV=1	REV__tr|A0A553SFA5|A0A553SFA5_NIACIArabinogalactanendo-beta-1,4-galactanaseOS=NialliacirculansOX=1397GN=CEQ21_08370PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7599365115166	2	434.757298	867.500044	2.3288	0.0010125	3.4158	0.001485	5.7446	0.0024975	434.75885563718225	65.368	0.37971	65.695	65.517	65.896	0.32689					22	11	3	0	0	0	0.89008	1	27379	27379		2.5775	2.5775	1	1717000	+		38788	14698	19045	19123	44925	44925					0.06099354096204479
VLLLHLLMV	9	Unmodified	_VLLLHLLMV_					0	0	0		ENST00000509268.1_1_5:82400826-82406918:+|nuORF	ENST00000509268.1_1_5:82400826-82406918:+|nuORF	ENST00000509268.1_1_5:82400826-82406918:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	350.1812011599541	3	350.896313	1049.66711	1.3915	0.00048826	-1.5245	-0.00053493	-0.133	-4.6669E-05	350.89577074280174	46.866	1.1412	47.197	46.848	47.989	0.33034					66	37	2	0	0	0	0.11954	1	19529	19529		0.26902	0	1	12736000			38789	7021	19046	19124	44926	44926					0.1442620192110553
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2747680544853	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.3	1	113.48	112.98	113.98	0.17485								0	0	0	0.66254	1	49126	49126		0.15932	0	1		+		38790	9349	19047	19125	44927	44927					0.20896880155692088
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2750732302666	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.01	1	114.19	113.69	114.69	0.17579								0	0	0	0.66254	1	49413	49413		0.15932	0	1		+		38791	9349	19047	19125	44928	44928					0.20896880155692088
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2753173708916	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.13	1	114.31	113.81	114.81	0.17579								0	0	0	0.66254	1	49461	49461		0.15932	0	1		+		38792	9349	19047	19125	44929	44929					0.20896880155692088
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2754394412041	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.33	1	114.51	114.01	115.01	0.17579								0	0	0	0.66254	1	49543	49543		0.15932	0	1		+		38793	9349	19047	19125	44930	44930					0.20896880155692088
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_01	3	397.2749816775322	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.2	1	116.4	115.9	116.9	0.19572								0	0	0	0.66254	1	50292	50292		0.15932	0	1		+		38794	9349	19047	19125	44931	44931					0.20896880155692088
VLLLIIQHKL	10	Unmodified	_VLLLIIQHKL_					0	0	0			REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	REV__nc|ENSG00000112031|Q9UGC7-4|MTRF1L	MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2741577029228	3	397.272548	1188.79581	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.78	1	108.93	108.43	109.43	0.1548								0	0	0	0.66254	1	47036	47036		0.15932	0	1		+		38795	9349	19047	19125	44932	44932					0.20896880155692088
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.8995544314384	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.9078	1	9.9078	9.4078	10.408	0								0	0	0	1.0178	1	4081	4081		1.6526	0	1		+		38796	10018	19048	19126	44933	44933					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9006530642509	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.552	1	11.552	11.052	12.052	0								0	0	0	1.0178	1	4773	4773		0.40072	0	1		+		38797	10018	19048	19126	44934	44934					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.679	1	11.679	11.179	12.179	0								0	0	0	1.0178	1	4827	4827		1.6526	0	1		+		38798	10018	19048	19126	44935	44935					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003784060478	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.078	1	12.078	11.578	12.578	0								0	0	0	1.0178	1	4996	4996		1.6526	0	1		+		38799	10018	19048	19126	44936	44936					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9000121951103	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.296	1	12.296	11.796	12.796	0								0	0	0	1.0178	1	5087	5087		1.6526	0	1		+		38800	10018	19048	19126	44937	44937					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.788	1	12.788	12.288	13.288	0								0	0	0	1.0178	1	5294	5294		0.40072	0	1		+		38801	10018	19048	19126	44938	44938					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9004394412041	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.276	1	13.276	12.776	13.776	0								0	0	0	1.0178	1	5500	5500		0.40072	0	1		+		38802	10018	19048	19126	44939	44939					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9003173708916	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.352	1	14.352	13.852	14.852	0								0	0	0	1.0178	1	5954	5954		0.40072	0	1		+		38803	10018	19048	19126	44940	44940					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9005615115166	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.655	1	15.655	15.155	16.155	0								0	0	0	1.0178	1	6500	6500		0.40072	0	1		+		38804	10018	19048	19126	44941	44941					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_01	1	308.9001953005791	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.844	1	15.844	15.344	16.344	0								0	0	0	1.0178	1	6579	6579		0.40072	0	1		+		38805	10018	19048	19126	44942	44942					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.9001037478447	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13	1	13.1	12.6	13.6	0.09944								0	0	0	1.0178	1	5396	5396		0.40072	0	1		+		38806	10018	19048	19126	44943	44943					0.2134334728690419
VLLLILIK	8	Unmodified	_VLLLILIK_					0	0	0			REV__ENSG00000137392|ENST00000259938|CLPS	REV__ENSG00000137392|ENST00000259938|CLPS	MSMS	GG20161007_CRH_Patient100_W632_01	3	308.8999511599541	3	308.900052	923.678326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.532	1	13.226	12.726	13.726	0.69396								0	0	0	1.0178	1	5204	5204		1.6526	0	1		+		38807	10018	19048	19126	44944	44944					0.2134334728690419
VLLLKKLHK	9	Unmodified	_VLLLKKLHK_					0	0	0			REV__ENSG00000118322|ENST00000327245|ATP10B	REV__ENSG00000118322|ENST00000327245|ATP10B	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3861572146416	2	546.386794	1090.75904	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.924	1	85.924	85.424	86.424	0								0	0	0	0.42693	1	35801	35801		0	0	1		+		38808	9518	19049	19127	44945	44945					0.2172862832978808
VLLLNKLFL	9	Unmodified	_VLLLNKLFL_					0	0	0		tr|A0A553SL73|A0A553SL73_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20105PE=4SV=1	tr|A0A553SL73|A0A553SL73_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20105PE=4SV=1	tr|A0A553SL73|A0A553SL73_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_20105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8605834841728	2	536.860078	1071.7056	2.3951	0.0012858	-1.3377	-0.00071815	1.0574	0.00056765	536.859408864217	47.602	0.56542	48.984	48.825	49.391	1.3825					38	17	3	0	0	0	0.44512	1	19919	19919		13.508	0.97634	1	1175600			38809	16325	19050	19128	44946	44946					0.17261830827260383
VLLLPKVNK	9	Unmodified	_VLLLPKVNK_					0	0	0		ENSG00000187616|ENST00000339996|MYMK	ENSG00000187616|ENST00000339996|MYMK	ENSG00000187616|ENST00000339996|MYMK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.3513671755791	2	512.349877	1022.6852	2.0107	0.0010302	-0.96091	-0.00049232	1.0498	0.00053786	512.349195390186	73.576	0.21283	73.576	73.491	73.704	0					11	6	2	0	0	0	0.68551	1	30682	30682		7.9102	0	1	542450			38810	4831	19051	19129	44947	44947					0.17476660167460523
VLLLRVLLL	9	Unmodified	_VLLLRVLLL_					0	0	0		ENST00000378944.9_1_19:36276198-36277438:+|nuORF	ENST00000378944.9_1_19:36276198-36277438:+|nuORF	ENST00000378944.9_1_19:36276198-36277438:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3851806521416	2	526.38372	1050.75289	4.5472	0.0023936	-0.038795	-2.0421E-05	4.5084	0.0023732	526.3836332181686	90.006	3.2712	91.026	90.646	93.917	1.0199					219	102	4	0	0	0	0.19075	1	38709	38709		34.102	5.6156	1	10598000			38811	6206	19052	19130	44948	44948					0.22954110098271485
VLLLSPLRL	9	Unmodified	_VLLLSPLRL_					0	0	0			REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.3507568240166	2	512.349877	1022.6852	1.8967	0.00097176	-0.49357	-0.00025288	1.4031	0.00071888	512.3496101486317	71.735	0.31207	73.076	72.936	73.248	1.3415					20	9	3	0	0	0	0.11643	1	30115	30115		43.858	0	1	3640800	+		38812	9714	19053	19131	44949	44949					0.17476660167460523
VLLLSPLRL	9	Unmodified	_VLLLSPLRL_					0	0	0			REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	REV__ENST00000514698.5_1_4:980866-997838:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	512.349877	1022.6852	1.8967	0.00097176	-0.49357	-0.00025288	1.4031	0.00071888	512.3496101486317	71.735	0.31207	73.076	72.936	73.248	1.3415	-0.18264	-7.3149E-05	NaN	43.858	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3640800	+		38813	9714	19053	19131							0.17476660167460523
VLLLTLHW	8	Unmodified	_VLLLTLHW_					0	0	0			REV__nc|ENSG00000185189|Q9NSY0-2|NRBP2	REV__nc|ENSG00000185189|Q9NSY0-2|NRBP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2067443728447	3	332.207656	993.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.104	1	75.104	74.604	75.604	0								0	0	0	1.0178	1	31268	31268		0.45834	0	1		+		38814	11454	19054	19132	44950	44950					0.10408129070549421
VLLPDERTISL	11	Unmodified	_VLLPDERTISL_					0	0	0		ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	ENSG00000101138|ENST00000217109|CSTF1	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3678466677666	2	628.366453	1254.71835	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.306	1	58.274	57.774	58.774	1.9684								0	0	0	0.056367	1	23613	23613		49.527	26.791	1				38815	1323	19055	19133	44951	44951					0.1011819742886928
VLLPKKTS	8	Unmodified	_VLLPKKTS_					0	0	0		ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MSMS	GG20161007_CRH_Patient100_W632_02	4	443.2931396365166	2	443.292028	884.569503	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.84	1	108	107.5	108.5	0.15795								0	0	0	1.0178	1	46440	46440		0.69038	0	1				38816	4864	19056	19134	44952	44952					0.12260136316615444
VLLPLAHF	8	Unmodified	_VLLPLAHF_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2478515505791	3	303.856734	908.548374	0.80643	0.00024504	-1.5909	-0.00048341	-0.78449	-0.00023837	303.8562152600612	36.95	0.12291	37.255	37.148	37.271	0.30497					7	5	2	0	0	0	2.3239	1	15519	15519		0.45834	0	1	1345900			38817	5347	19057	19135	44953	44953					0.09044171007747082
VLLPLAHF	8	Unmodified	_VLLPLAHF_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2478515505791	3	303.856734	908.548374	0.79075	0.00024027	-0.7084	-0.00021525	0.08235	2.5023E-05	303.85632567956156	36.626	0.19109	36.928	36.834	37.025	0.30197					19	12	2	0	0	0	2.3239	1	15373	15373		0.45834	0	1	2235600			38818	5347	19057	19135	44954	44954					0.09044171007747082
VLLPLLGIKI	10	Unmodified	_VLLPLLGIKI_					0	0	0		tr|A0A7D6ZWL9|A0A7D6ZWL9_9CLOTATPsynthasesubunitIOS=ClostridiumintestinaleOX=36845GN=HZF06_19520PE=4SV=1	tr|A0A7D6ZWL9|A0A7D6ZWL9_9CLOTATPsynthasesubunitIOS=ClostridiumintestinaleOX=36845GN=HZF06_19520PE=4SV=1	tr|A0A7D6ZWL9|A0A7D6ZWL9_9CLOTATPsynthasesubunitIOS=ClostridiumintestinaleOX=36845GN=HZF06_19520PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	360.2417175173759	3	360.258127	1077.75255	2.492	0.00089775	-0.68721	-0.00024757	1.8047	0.00065017	360.5923142613411	99.847	0.18584	99.919	99.838	100.02	0.072723					6	5	2	0	0	0	0.12561	1	41840	41840		0	0	1	639070			38819	17172	19058	19136	44955	44955					0.21678690378394094
VLLPLRVTL	9	Unmodified	_VLLPLRVTL_					0	0	0		ENSG00000138678|ENST00000264409|GPAT3	ENSG00000138678|ENST00000264409|GPAT3	ENSG00000138678|ENST00000264409|GPAT3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	512.3511840701103	2	512.349877	1022.6852	2.2832	0.0011698	0.34261	0.00017554	2.6258	0.0013453	512.3501341708052	72.999	0.25485	73.324	73.179	73.434	0.32494					13	7	2	0	0	0	0.46566	1	30522	30522		17.113	0	1	734090			38820	2847	19059	19137	44956	44956					0.17476660167460523
VLLPLRVTL	9	Unmodified	_VLLPLRVTL_					0	0	0		ENSG00000138678|ENST00000264409|GPAT3	ENSG00000138678|ENST00000264409|GPAT3	ENSG00000138678|ENST00000264409|GPAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.3503906130791	2	512.349877	1022.6852	1.8545	0.00095015	-0.87603	-0.00044884	0.97846	0.00050131	512.3495065008144	71.234	0.34236	73.058	72.88	73.222	1.824					21	10	3	0	0	0	0.15456	1	29888	29888		38.176	2.0485	1	2997200			38821	2847	19059	19137	44957	44957					0.17476660167460523
VLLPSRHR	8	Unmodified	_VLLPSRHR_					0	0	0		tr|A0A553SKM2|A0A553SKM2_NIACIDEAD-boxATP-dependentRNAhelicaseCshBOS=NialliacirculansOX=1397GN=cshBPE=3SV=1	tr|A0A553SKM2|A0A553SKM2_NIACIDEAD-boxATP-dependentRNAhelicaseCshBOS=NialliacirculansOX=1397GN=cshBPE=3SV=1	tr|A0A553SKM2|A0A553SKM2_NIACIDEAD-boxATP-dependentRNAhelicaseCshBOS=NialliacirculansOX=1397GN=cshBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	977.6019164919853	1	977.600309	976.593033	3.3957	0.0033196	-1.9138	-0.0018709	1.4819	0.0014487	977.5990213801234	106.12	0.13988	106.27	106.18	106.32	0.15781					18	7	4	0	0	0	0.89181	1	45347	45347		0.6015	0	1	80295000			38822	16294	19060	19138	44958	44958					0.10379994873801479
VLLPSVCFSFT	11	Unmodified	_VLLPSVCFSFT_					0	0	0			REV__nc|ENSG00000102780|Q86XP1-2|DGKH	REV__nc|ENSG00000102780|Q86XP1-2|DGKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.8199951052666	2	606.820292	1211.62603	1.7745	0.0010768	-2.3404	-0.0014202	-0.56587	-0.00034338	606.8189051086096	72.203	0.3812	72.528	72.355	72.737	0.32494					32	11	4	0	0	0	0.54522	1	30204	30204		22.736	5.6234	1	2408700	+		38823	9081	19061	19139	44959	44959					0.028683960909575035
VLLRKKHR	8	Unmodified	_VLLRKKHR_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	350.5715515017509	3	350.573332	1048.69817	-1.6038	-0.00056225	-1.7764	-0.00062277	-3.3802	-0.001185	350.57231475586224	31.193	0.70242	31.193	30.99	31.692	0					54	22	3	0	0	0	0.89187	2	13060	13060;13189		0.40072	0	1	1107200	+		38824	8714	19062	19140	44960;44961	44960					0.17576536070214388
VLLRKKHR	8	Unmodified	_VLLRKKHR_					0	0	0			REV__ENSG00000070061|ENST00000374647|ELP1	REV__ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2425720095634	3	350.573332	1048.69817	-0.051003	-1.788E-05	-1.494	-0.00052375	-1.545	-0.00054163	350.5711047068008	22.821	0.8298	24.035	23.705	24.535	1.2145					57	26	4	0	0	0	0.89187	2	9454	9454;9544		0.40072	0	1	934020	+		38825	8714	19062	19140	44962;44963	44962					0.17576536070214388
VLLRQRAAER	10	Unmodified	_VLLRQRAAER_					0	0	0			REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3704711794853	2	606.370195	1210.72584	2.1574	0.0013082	-0.97056	-0.00058852	1.1869	0.00071968	606.369549653458	77.018	0.66023	77.018	76.403	77.063	0					52	20	3	0	0	0	0.89803	1	31910	31910		1.4819	0	1	5160500	+		38826	11989	19063	19141	44964	44964					0.12890394539772387
VLLRQRAAER	10	Unmodified	_VLLRQRAAER_					0	0	0			REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3708984255791	2	606.370195	1210.72584	2.1371	0.0012959	-1.3018	-0.00078939	0.83528	0.00050649	606.369326866515	77.237	1.3452	77.237	77.063	78.409	0					115	42	3	0	0	0	0.89803	1	32207	32207		1.4819	0	1	8472300	+		38827	11989	19063	19141	44965	44965					0.12890394539772387
VLLRQRAAER	10	Unmodified	_VLLRQRAAER_					0	0	0			REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3703491091728	2	606.370195	1210.72584	2.4745	0.0015004	-2.6405	-0.0016011	-0.16606	-0.00010069	606.368031336412	74.732	1.5436	75.056	74.138	75.681	0.32464					95	48	2	0	0	0	0.89803	1	31231	31231		1.4819	0	1	3106300	+		38828	11989	19063	19141	44966	44966					0.12890394539772387
VLLRQRAAER	10	Unmodified	_VLLRQRAAER_					0	0	0			REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3705932497978	2	606.370195	1210.72584	1.9807	0.0012011	-0.84354	-0.0005115	1.1372	0.00068956	606.3695855983566	77.147	1.6217	77.464	76.359	77.981	0.31653					160	51	4	0	0	0	0.89803	3	32010	32010;32202;32242		1.4819	0	1	10235000	+		38829	11989	19063	19141	44967;44968;44969	44967					0.12890394539772387
VLLRQRAAER	10	Unmodified	_VLLRQRAAER_					0	0	0			REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	REV__nc|ENSG00000262209|Q9Y5G1-2|PCDHGB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3712646365166	2	606.370195	1210.72584	2.4698	0.0014976	-0.25012	-0.00015167	2.2197	0.001346	606.3699278430854	76.224	1.6992	77.518	76.724	78.423	1.2938					127	54	3	0	0	0	0.89803	2	31897	31897;31945		1.4819	0	1	6795700	+		38830	11989	19063	19141	44970;44971	44970					0.12890394539772387
VLLRRHRHQ	9	Unmodified	_VLLRRHRHQ_					0	0	0		ENST00000483195.5_1_2:74452054-74512997:-|nuORF;nc|ENSG00000188687|Q9BY07-6|SLC4A5;nc|ENSG00000188687|Q9BY07-5|SLC4A5;nc|ENSG00000188687|Q9BY07-7|SLC4A5;nc|ENSG00000188687|Q9BY07-4|SLC4A5;nc|ENSG00000188687|Q9BY07-8|SLC4A5;ENST00000451608.2_1_2:74452054-74542150:-|nuORF;ENSG00000188687|ENST00000394019|SLC4A5;nc|ENSG00000188687|Q9BY07|SLC4A5;nc|ENSG00000188687|Q9BY07-2|SLC4A5	ENST00000483195.5_1_2:74452054-74512997:-|nuORF	ENST00000483195.5_1_2:74452054-74512997:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2098266482353	2	607.870697	1213.72684	1.6822	0.0010226	1.6159	0.00098227	3.2981	0.0020048	607.8710800336796	42.266	0.18406	42.586	42.482	42.666	0.32058					8	5	2	0	0	0	0.11898	1	17738	17738		2.3027	0	1	471860			38831	4873	19064	19142	44972	44972					0.12852653699360417
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3848144412041	2	526.38372	1050.75289	2.2343	0.0011761	0.066565	3.5039E-05	2.3008	0.0012111	526.3835253431276	91.55	1.8882	91.55	91.281	93.169	0					121	60	3	0	0	0	0.091139	7	38291	38188;38239;38291;38343;38540;38688;38829		52.268	6.2474	1	3168500			38832	21	19065	19143	44973;44974;44975;44976;44977;44978;44979	44975					0.22954110098271485
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3853027224541	2	526.38372	1050.75289	2.8104	0.0014794	0.23682	0.00012466	3.0472	0.001604	526.3837400827607	90.906	1.582	91.115	90.772	92.354	0.20903					93	48	3	0	0	0	0.10993	6	38142	38040;38092;38142;38195;38249;38304		46.021	6.0636	1	1491700			38833	21	19065	19143	44980;44981;44982;44983;44984;44985	44982					0.22954110098271485
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3866454958916	2	526.38372	1050.75289	4.5472	0.0023936	-0.038795	-2.0421E-05	4.5084	0.0023732	526.3836332181686	90.006	3.2712	91.026	90.646	93.917	1.0199					219	102	4	0	0	0	0.006164	16	37908	37826;37871;37908;37948;37986;38025;38064;38105;38160;38211;38262;38303;38420;38589;38762;38809		117.6	26.815	1	10598000			38834	21	19065	19143	44986;44987;44988;44989;44990;44991;44992;44993;44994;44995;44996;44997;44998;44999;45000;45001	44988					0.22954110098271485
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3851806521416	2	526.38372	1050.75289	3.1886	0.0016784	-0.46004	-0.00024216	2.7285	0.0014363	526.3834247200615	113.08	0.16358	113.25	113.16	113.33	0.16914					6	4	2	0	0	0	0.19075	1	49044	49044		34.102	0	1	940870			38835	21	19065	19143	45002	45002					0.22954110098271485
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3865234255791	2	526.38372	1050.75289	4.3251	0.0022767	-0.26817	-0.00014116	4.0569	0.0021355	526.3835546110593	89.542	3.3235	90.947	90.552	93.876	1.4045					227	104	4	0	0	0	0.013238	15	37678	37626;37678;37724;37765;37817;37869;37911;37962;38015;38068;38119;38170;38471;38520;38641		104.8	26.815	1	7524900			38836	21	19065	19143	45003;45004;45005;45006;45007;45008;45009;45010;45011;45012;45013;45014;45015;45016;45017	45004					0.22954110098271485
VLLRVLILL	9	Unmodified	_VLLRVLILL_					0	0	0		ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant;ENSG00000137845|ENST00000260408|ADAM10;ENST00000560608.5_1_15:58971480-59041769:-|nuORF;ENST00000561149.1_1_15:58974496-59041769:-|nuORF;ENST00000558733.5_1_15:58947546-59041769:-|nuORF;nc|ENSG00000137845|O14672-2|ADAM10	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	ADAM10|p.C344*|1|0.17|ENSG00000137845|chr15:58633331-58633341|ACTTTTTTCAC/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.38372	1050.75289	3.2988	0.0017365	-0.0012615	-6.6403E-07	3.2976	0.0017358	526.383760391334	113.05	0.16233	113.2	113.09	113.25	0.14912	-0.021501	0.00010993	NaN	34.102	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	915840			38837	21	19065	19143							0.22954110098271485
VLLSEILHL	9	Unmodified	_VLLSEILHL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.8254272341728	2	518.823692	1035.63283	3.4885	0.0018099	-1.2929	-0.0006708	2.1956	0.0011391	518.8225914523285	81.385	0.64954	82.618	82.193	82.842	1.2332					50	20	4	0	0	0	0.030843	2	34153	34153;34204		86.121	25.732	1	4966600			38838	924	19066	19144	45018;45019	45018					0.11644077033861322
VLLSEILHL	9	Unmodified	_VLLSEILHL_					0	0	0		nc|ENSG00000075151|O43432|EIF4G3;nc|ENSG00000075151|O43432-3|EIF4G3;ENSG00000075151|ENST00000602326|EIF4G3;nc|ENSG00000075151|O43432-4|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	nc|ENSG00000075151|O43432|EIF4G3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.8251220583916	2	518.823692	1035.63283	2.5758	0.0013364	0.36012	0.00018684	2.9359	0.0015232	518.8236027848582	80.885	0.43506	82.581	82.394	82.83	1.6959					43	13	4	0	0	0	0.030843	2	33968	33919;33968		86.121	26.326	1	5093800			38839	924	19066	19144	45020;45021	45021					0.11644077033861322
VLLSQLPSL	9	Unmodified	_VLLSQLPSL_					0	0	0		nc|ENSG00000135502|Q8NG04-2|SLC26A10P;nc|ENSG00000135502|Q8NG04|SLC26A10P	nc|ENSG00000135502|Q8NG04-2|SLC26A10P	nc|ENSG00000135502|Q8NG04-2|SLC26A10P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.3049804568291	2	485.302593	968.590633	1.6908	0.00082055	0.5972	0.00028982	2.288	0.0011104	485.3030175224548	68.176	0.22028	68.176	67.98	68.201	0					10	6	2	0	0	0	0.13873	1	28370	28370		39.957	0	1	487100			38840	7876	19067	19145	45022	45022					0.10508101625475774
VLLSQLPTV	9	Unmodified	_VLLSQLPTV_					0	0	0		ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.3023559451103	2	485.302593	968.590633	2.4575	0.0011926	-0.0089341	-4.3358E-06	2.4485	0.0011883	485.3029937139134	67.657	0.21933	67.98	67.869	68.088	0.32269					10	6	2	0	0	0	0.083604	1	28324	28324		54.774	8.7526	1	648660			38841	2660	19068	19146	45023	45023					0.10508101625464406
VLLSQLPTV	9	Unmodified	_VLLSQLPTV_					0	0	0		ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.3054992556572	2	485.302593	968.590633	2.0114	0.00097613	1.4482	0.00070281	3.4596	0.0016789	485.3036465431455	66.469	0.36932	67.858	67.657	68.027	1.3888					28	11	3	0	0	0	0.051699	2	27856	27856;27907		67.344	9.8725	1	2949800			38842	2660	19068	19146	45024;45025	45024					0.10508101625464406
VLLSQLPTV	9	Unmodified	_VLLSQLPTV_					0	0	0		ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	ENSG00000135378|ENST00000257836|PRRG4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3041869997978	2	485.302593	968.590633	1.6781	0.0008144	1.9791	0.00096048	3.6573	0.0017749	485.3038127948826	66.001	0.36975	67.91	67.706	68.076	1.9085					26	11	3	0	0	0	0.076627	1	27738	27738		57.471	9.1255	1	2218000			38843	2660	19068	19146	45026	45026					0.10508101625464406
VLLSSLEDL	9	Unmodified	_VLLSSLEDL_					0	0	0		ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	988.5563232302666	1	988.556104	987.548827	1.7287	0.0017089	0.1744	0.0001724	1.9031	0.0018813	988.5557991610422	65.966	0.34951	65.966	65.774	66.123	0					18	10	2	0	0	0	0.069258	2	27482	27482;27526		60.39	2.9182	1	1184100			38844	6954	19069	19147	45027;45028	45027					0.0545550114627531
VLLSSLEDL	9	Unmodified	_VLLSSLEDL_					0	0	0		ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.7813293337822	2	494.78169	987.548827	1.4038	0.00069456	-0.34904	-0.0001727	1.0547	0.00052186	494.78129745959814	65.951	0.44786	65.951	65.708	66.156	0					27	13	3	0	0	0	0.15478	1	27535	27535		38.151	2.107	1	1795900			38845	6954	19069	19147	45029	45029					0.0545550114627531
VLLSSLEDL	9	Unmodified	_VLLSSLEDL_					0	0	0		ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.7820007205009	2	494.78169	987.548827	2.5766	0.0012749	-0.451	-0.00022315	2.1256	0.0010517	494.7811924004482	65.555	0.38004	65.882	65.674	66.054	0.32689					27	11	3	0	0	0	0.15478	1	27415	27415		38.151	4.0487	1	2252700			38846	6954	19069	19147	45030	45030					0.0545550114627531
VLLSSLEDL	9	Unmodified	_VLLSSLEDL_					0	0	0		ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	988.5588256716728	1	988.556104	987.548827	2.0577	0.0020342	0.91734	0.00090684	2.9751	0.002941	988.5567974822792	65.576	0.31535	65.903	65.707	66.023	0.32689					19	9	3	0	0	0	0.042029	1	27431	27431		74.423	3.2892	1	1186100			38847	6954	19069	19147	45031	45031					0.0545550114627531
VLLSSLEDL	9	Unmodified	_VLLSSLEDL_					0	0	0		ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	ENST00000496455.6_1_3:155611487-155621652:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.7835876345634	2	494.78169	987.548827	3.1068	0.0015372	0.77427	0.00038309	3.881	0.0019203	494.78170334278803	64.407	0.36315	65.814	65.622	65.985	1.4071					28	11	3	0	0	0	0.087207	2	27036	26984;27036		53.576	2.7205	1	2375600			38848	6954	19069	19147	45032;45033	45033					0.0545550114627531
VLLTFKIFL	9	Unmodified	_VLLTFKIFL_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3556396365166	2	547.354628	1092.6947	1.8894	0.0010342	0.29116	0.00015937	2.1805	0.0011935	547.3547814377127	90.872	1.1351	90.872	90.621	91.756	0					87	35	4	0	0	0	5.2553E-05	6	37978	37934;37978;38030;38082;38125;38176		149.99	61.091	1	4387600			38849	305	19070	19148	45034;45035;45036;45037;45038;45039	45035					0.15206428452961518
VLLTFKIFL	9	Unmodified	_VLLTFKIFL_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3560668826103	2	547.354628	1092.6947	2.6221	0.0014352	0.63157	0.00034569	3.2537	0.0017809	547.3552453283352	90.316	0.94907	90.525	90.21	91.159	0.20903					72	29	3	0	0	0	0.007852	4	37804	37752;37804;37859;37913		111.29	56.513	1	3717500			38850	305	19070	19148	45040;45041;45042;45043	45041					0.15206428452961518
VLLTFKIFL	9	Unmodified	_VLLTFKIFL_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3567993044853	2	547.354628	1092.6947	4.9736	0.0027223	-0.254	-0.00013903	4.7196	0.0025833	547.3545498056475	89.329	2.0347	90.349	90.074	92.109	1.0199					159	63	4	0	0	0	0.0022704	11	37623	37579;37623;37660;37700;37741;37796;37863;37913;37965;38123;38191		129.77	61.692	1	15924000			38851	305	19070	19148	45044;45045;45046;45047;45048;45049;45050;45051;45052;45053;45054	45045					0.15206428452961518
VLLTFKIFL	9	Unmodified	_VLLTFKIFL_					0	0	0		nc|ENSG00000173698|Q8IZP9-10|ADGRG2;nc|ENSG00000173698|Q8IZP9-9|ADGRG2;nc|ENSG00000173698|Q8IZP9-8|ADGRG2;nc|ENSG00000173698|Q8IZP9-7|ADGRG2;nc|ENSG00000173698|Q8IZP9-5|ADGRG2;chrX:19035977-19040189|335|18.66|0.33|5.83|-|ENST00000379876|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-6|ADGRG2;chrX:19031037-19035942|377|39.75|0.78|5.67|-|ENST00000360279|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-3|ADGRG2;chrX:19037490-19040189|316|17.28|0.22|6.3|-|ENST00000379878|ADGRG2,ADGRG2;nc|ENSG00000173698|Q8IZP9-4|ADGRG2;nc|ENSG00000173698|Q8IZP9-2|ADGRG2;chrX:19037490-19037598|357|35.74|0.56|5.99|-|ENST00000357991|ADGRG2,ADGRG2;ENSG00000173698|ENST00000379869|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	nc|ENSG00000173698|Q8IZP9-10|ADGRG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3567993044853	2	547.354628	1092.6947	4.6329	0.0025358	-0.29388	-0.00016085	4.339	0.002375	547.3545308376667	88.845	1.6082	90.292	90.017	91.625	1.4467					132	50	4	0	0	0	0.00020031	10	37477	37390;37438;37477;37517;37557;37613;37690;37812;37858;37940		142.08	79.507	1	12040000			38852	305	19070	19148	45055;45056;45057;45058;45059;45060;45061;45062;45063;45064	45057					0.15206428452961518
VLLTGLHAV	9	Unmodified	_VLLTGLHAV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENST00000565479.5_1_16:30104033-30107516:-|nuORF	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	462.1454955935478	2	461.789653	921.564752	2.3972	0.001107	-0.3185	-0.00014708	2.0787	0.0009599	461.78985219497685	43.967	0.37017	45.321	45.163	45.533	1.3536					19	11	2	0	0	0	0.11109	1	18430	18430		9.3474	6.4582	1	1365600			38853	1134	19071	19149	45065	45065					0.10083252173853907
VLLTGLHAV	9	Unmodified	_VLLTGLHAV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENST00000565479.5_1_16:30104033-30107516:-|nuORF	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1462585330009	2	461.789653	921.564752	2.3033	0.0010636	-1.1066	-0.00051102	1.1967	0.00055261	461.7895131986832	43.397	0.35101	45.341	45.104	45.455	1.9438					18	11	2	0	0	0	0.116	1	18179	18179		5.2307	0	1	1022700			38854	1134	19071	19149	45066	45066					0.10083252173853907
VLLTLKVIH	9	Unmodified	_VLLTLKVIH_					0	0	0			REV__ENST00000432901.3_1_20:18123720-18123792:+|nuORF	REV__ENST00000432901.3_1_20:18123720-18123792:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	346.0704833865166	3	345.902344	1034.6852	-1.9831	-0.00068595	-4.2211	-0.0014601	-6.2042	-0.002146	345.8997629292241	25.901	0.24608	25.901	25.718	25.964	0					10	7	2	0	0	0	0.11954	1	10774	10774		0.26902	0	1	414900	+		38855	13037	19072	19150	45067	45067					0.1692466016745584
VLLTLQKP	8	Unmodified	_VLLTLQKP_					0	0	0		ENSG00000137076|ENST00000314888|TLN1;nc|ENSG00000137076|Q9Y490-2|TLN1	ENSG00000137076|ENST00000314888|TLN1	ENSG00000137076|ENST00000314888|TLN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5366393923759	3	304.535661	910.585153	0.57631	0.00017551	3.6398	0.0011084	4.2161	0.0012839	304.5365910702305	32.548	1.4941	32.842	32.497	33.991	0.29431					73	50	3	0	0	0	0.89124	1	13622	13622		1.1933	0	1	3451200			38856	2757	19073	19151	45068	45068					0.1262842283365444
VLLTMIARV	9	Unmodified	_VLLTMIARV_					0	0	0		ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.3210021853447	2	508.320263	1014.62597	2.1802	0.0011082	2.6623	0.0013533	4.8424	0.0024615	508.3202734275762	61.945	0.28249	62.274	62.165	62.448	0.32974					17	8	3	0	0	0	0.37774	1	25958	25958		21.537	4.5947	1	305290			38857	5434	19074	19152	45069	45069					0.11924440881625742
VLLTMIARV	9	Unmodified	_VLLTMIARV_					0	0	0		ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3227722048759	2	508.320263	1014.62597	3.62	0.0018401	0.064708	3.2892E-05	3.6848	0.001873	508.32054611273594	60.724	0.25447	62.143	61.995	62.249	1.4196					13	7	2	0	0	0	0.18809	1	25504	25504		34.402	11.665	1	865520			38858	5434	19074	19152	45070	45070					0.11924440881625742
VLLTMIARV	9	Unmodified	_VLLTMIARV_					0	0	0		ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	508.320263	1014.62597	2.3579	0.0011986	-0.8205	-0.00041708	1.5374	0.00078149	508.31997109579413	62.609	0.21524	62.609	62.492	62.707	0	0.32029	-0.0013736	NaN	34.402	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	377410			38859	5434	19074	19152							0.11924440881625742
VLLTMIARV	9	Unmodified	_VLLTMIARV_					0	0	0		ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	ENSG00000265808|ENST00000578049|SEC22B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.320263	1014.62597	3.3397	0.0016977	0.59124	0.00030054	3.931	0.0019982	508.3216485258902	60.164	0.31513	62.13	61.977	62.292	1.9653	-0.15962	6.1635E-05	NaN	34.402	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1047200			38860	5434	19074	19152							0.11924440881625742
VLLTQLLKKM	10	Unmodified	_VLLTQLLKKM_					0	0	0		nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000074054|Q7Z460-4|CLASP1;nc|ENSG00000074054|Q7Z460-5|CLASP1;nc|ENSG00000074054|Q7Z460-3|CLASP1;nc|ENSG00000074054|Q7Z460|CLASP1;ENSG00000074054|ENST00000696935|CLASP1;nc|ENSG00000163539|O75122|CLASP2;ENSG00000163539|ENST00000682230|CLASP2;nc|ENSG00000163539|O75122-3|CLASP2	nc|ENSG00000074054|Q7Z460-2|CLASP1;nc|ENSG00000163539|O75122|CLASP2	nc|ENSG00000074054|Q7Z460-2|CLASP1	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2599975466728	3	396.25791	1185.7519	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.238	1	85.49	84.99	85.99	0.25227								0	0	0	0.66222	1	35642	35642		0.69767	0	1				38861	908;3697	19075	19153	45071	45071					0.1664552766703764
VLLVMIVKK	9	Unmodified	_VLLVMIVKK_					0	0	0			REV__tr|A0A553SJ84|A0A553SJ84_NIACISortaseOS=NialliacirculansOX=1397GN=CEQ21_16275PE=4SV=1	REV__tr|A0A553SJ84|A0A553SJ84_NIACISortaseOS=NialliacirculansOX=1397GN=CEQ21_16275PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	348.3289062380791	3	348.240079	1041.69841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.77	1	100.95	100.45	101.45	0.18047								0	0	0	0.42693	1	42401	42401		0	0	1		+		38862	14887	19076	19154	45072	45072					0.17922774955195564
VLLVTKPQR	9	Unmodified	_VLLVTKPQR_					0	0	0		nc|ENSG00000008323|Q3KR16-2|PLEKHG6;ENSG00000008323|ENST00000684764|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	nc|ENSG00000008323|Q3KR16-2|PLEKHG6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	351.5355712771416	3	351.897481	1052.67061	0.84128	0.00029604	2.6543	0.00093406	3.4956	0.0012301	351.8983976644453	38.726	0.54518	40.562	40.335	40.88	1.8366					38	16	3	0	0	0	0.10786	1	16263	16263		19.362	4.9566	1	1987500			38863	530	19077	19155	45073	45073					0.1463858801932929
VLLVVLPLPA	10	Unmodified	_VLLVVLPLPA_					0	0	0		ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;chr1:202235993-202297508|365|13.83|0.48|4.85|+|ENST00000439764|LGR6,LGR6;nc|ENSG00000133067|Q9HBX8-2|LGR6;ENSG00000133067|ENST00000367278|LGR6	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2385131716728	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.738	1	29.738	29.238	30.238	0								0	0	0	0.66237	1	12450	12450		0.15932	0	1				38864	166	19078	19156	45074	45074					0.17966428452996297
VLLVVLPLPA	10	Unmodified	_VLLVVLPLPA_					0	0	0		ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;chr1:202235993-202297508|365|13.83|0.48|4.85|+|ENST00000439764|LGR6,LGR6;nc|ENSG00000133067|Q9HBX8-2|LGR6;ENSG00000133067|ENST00000367278|LGR6	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2390624880791	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.891	1	29.891	29.391	30.391	0								0	0	0	0.66237	1	12515	12515		0.15932	0	1				38865	166	19078	19156	45075	45075					0.17966428452996297
VLLVVLPLPA	10	Unmodified	_VLLVVLPLPA_					0	0	0		ENST00000487787.5_1_1:202275897-202288332:+|nuORF;nc|ENSG00000133067|Q9HBX8-1|LGR6;chr1:202235993-202297508|365|13.83|0.48|4.85|+|ENST00000439764|LGR6,LGR6;nc|ENSG00000133067|Q9HBX8-2|LGR6;ENSG00000133067|ENST00000367278|LGR6	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	ENST00000487787.5_1_1:202275897-202288332:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.2410461306572	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.698	1	32.992	32.492	33.492	0.29431								0	0	0	0.66237	1	13725	13725		0.15932	0	1				38866	166	19078	19156	45076	45076					0.17966428452996297
VLLVVPVWP	9	Unmodified	_VLLVVPVWP_					0	0	0			REV__chr12:47995308-47995710|176|31.3|0.86|5.18|-|1|COL2A1,COL2A1|1	REV__chr12:47995308-47995710|176|31.3|0.86|5.18|-|1|COL2A1,COL2A1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3274108767509	2	511.325871	1020.63719	2.2048	0.0011274	0.6594	0.00033717	2.8642	0.0014646	511.32624775614283	81.37	0.76203	81.661	81.338	82.1	0.29056					80	24	5	0	0	0	0.84963	1	34059	34059		0.6015	0	1	201660000	+		38867	8248	19079	19157	45077	45077					0.12769586247418374
VLLWASVLFL	10	Unmodified	_VLLWASVLFL_					0	0	0		nc|ENSG00000172478|Q08AI8-3|MAB21L4;nc|ENSG00000172478|Q08AI8-2|MAB21L4;ENSG00000172478|ENST00000388934|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	nc|ENSG00000172478|Q08AI8-3|MAB21L4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	580.8604614138603	2	580.857535	1159.70052	2.5034	0.0014541	0.76517	0.00044445	3.2685	0.0018985	580.8576907303283	89.039	0.32174	89.262	89.101	89.422	0.2236					19	9	3	0	0	0	0.5476	1	37317	37317		25.399	3.6527	1	614690			38868	4239	19080	19158	45078	45078					0.12705526964646197
VLLYKVRL	8	Unmodified	_VLLYKVRL_					0	0	0			REV__nc|ENSG00000138617|Q8N5Y8-2|PARP16	REV__nc|ENSG00000138617|Q8N5Y8-2|PARP16	MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8090087771416	2	502.33677	1002.65899	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.21	1	104.38	103.88	104.88	0.1731								0	0	0	1.0178	1	44034	44034		0.69038	0	1		+		38869	10069	19081	19159	45079	45079					0.15776390995984002
VLMAQKEGKR	10	Unmodified	_VLMAQKEGKR_					0	0	0		ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3345214724541	2	580.334433	1158.65431	0.92169	0.00053489	0.21682	0.00012583	1.1385	0.00066071	580.3345823938197	50.936	0.63371	52.33	52.016	52.65	1.3938					69	20	4	0	0	0	0.38174	1	21326	21326		34.402	2.0962	1	102900000			38870	4168	19082	19160	45080	45080					0.08133138790913108
VLMAQKEGKR	10	Unmodified	_VLMAQKEGKR_					0	0	0		ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	ENSG00000170949|ENST00000683776|ZNF160	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3362304568291	2	580.334433	1158.65431	1.1588	0.0006725	-0.48576	-0.0002819	0.67306	0.0003906	580.3341740745587	50.351	0.75101	52.328	52.039	52.79	1.977					71	24	4	0	0	0	0.38174	1	21042	21042		34.402	2.0962	1	88446000			38871	4168	19082	19160	45081	45081					0.08133138790913108
VLMDLKALL	9	Unmodified	_VLMDLKALL_					0	0	0		ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENSG00000183258|ENST00000330503|DDX41	ENST00000505081.5_1_5:176938794-176940626:-|nuORF	ENST00000505081.5_1_5:176938794-176940626:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3173095583916	2	508.314646	1014.61474	3.0527	0.0015517	0.16819	8.5492E-05	3.2209	0.0016372	508.31493343719023	75.294	0.33231	76.6	76.435	76.768	1.3063					20	10	2	0	0	0	0.22154	1	31587	31587		30.637	2.1497	1	1968700			38872	4643	19083	19161	45082	45082					0.10801618787490952
VLMDLKALL	9	Unmodified	_VLMDLKALL_					0	0	0		ENST00000505081.5_1_5:176938794-176940626:-|nuORF;ENST00000507900.5_1_5:176938794-176942272:-|nuORF;ENST00000503078.5_1_5:176938794-176943460:-|nuORF;ENSG00000183258|ENST00000330503|DDX41	ENST00000505081.5_1_5:176938794-176940626:-|nuORF	ENST00000505081.5_1_5:176938794-176940626:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.3163635134697	2	508.314646	1014.61474	2.9573	0.0015032	0.9107	0.00046292	3.868	0.0019661	508.31504441018365	74.842	0.3405	76.624	76.42	76.76	1.7817					17	10	2	0	0	0	0.22154	1	31374	31374		30.637	2.1497	1	2369300			38873	4643	19083	19161	45083	45083					0.10801618787490952
VLMENIVYL	9	Unmodified	_VLMENIVYL_					0	0	0		nc|ENSG00000133706|Q9P2J5-3|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1	nc|ENSG00000133706|Q9P2J5-3|LARS1	nc|ENSG00000133706|Q9P2J5-3|LARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3013793826103	2	547.301736	1092.58892	1.5451	0.00084563	1.0773	0.00058963	2.6224	0.0014353	547.3015479433486	80.181	0.31235	80.181	80.041	80.354	0					22	9	3	0	0	0	0.37357	1	33384	33384		21.747	10.632	1	766680			38874	2581	19084	19162	45084	45084					0.0463272454521757
VLMENIVYL	9	Unmodified	_VLMENIVYL_					0	0	0		nc|ENSG00000133706|Q9P2J5-3|LARS1;nc|ENSG00000133706|Q9P2J5-2|LARS1;ENSG00000133706|ENST00000394434|LARS1	nc|ENSG00000133706|Q9P2J5-3|LARS1	nc|ENSG00000133706|Q9P2J5-3|LARS1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3019897341728	2	547.301736	1092.58892	1.7951	0.00098245	0.62848	0.00034397	2.4236	0.0013264	547.301009491649	79.686	0.31799	79.987	79.845	80.163	0.30047					15	9	2	0	0	0	0.42305	1	33326	33326		19.257	2.1704	1	570400			38875	2581	19084	19162	45085	45085					0.0463272454521757
VLMEYIRSL	9	Unmodified	_VLMEYIRSL_					0	0	0		ENST00000591367.5_1_18:21109371-21111665:+|nuORF;ENST00000589215.5_1_18:21087981-21111645:+|nuORF;ENSG00000141452|ENST00000269221|RMC1	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	ENST00000591367.5_1_18:21109371-21111665:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3138305544853	2	562.312635	1122.61072	2.0386	0.0011463	0.28726	0.00016153	2.3258	0.0013079	562.3121954924576	60.953	0.21809	61.281	61.14	61.358	0.32809					9	6	2	0	0	0	0.33297	1	25548	25548		23.79	11.258	1	360270			38876	2960	19085	19163	45086	45086					0.0543152929376447
VLMGLPLAQA	10	Oxidation (M)	_VLM(Oxidation (M))GLPLAQA_		VLM(1)GLPLAQA		VLM(82)GLPLAQA	0	0	1		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.7955200076103	2	514.794078	1027.5736	2.1918	0.0011284	1.7469	0.00089928	3.9387	0.0020276	514.7944286240562	58.339	0.61428	58.339	58.074	58.689	0					58	18	4	0	0	0	0.043019	4	24330	24286;24330;24368;24409		81.864	53.377	1	5597200			38877	4539	19086	19164	45087;45088;45089;45090	45088		77			0.06091857747992435
VLMGLPLAQA	10	Oxidation (M)	_VLM(Oxidation (M))GLPLAQA_		VLM(1)GLPLAQA		VLM(82)GLPLAQA	0	0	1		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.7957641482353	2	514.794078	1027.5736	2.5528	0.0013142	2.5267	0.0013007	5.0795	0.0026149	514.7942601124556	57.939	0.54296	58.262	57.981	58.524	0.32298					50	16	4	0	0	0	0.043019	3	24280	24238;24280;24327		81.864	45.82	1	6451700			38878	4539	19086	19164	45091;45092;45093	45092		77			0.06091857747992435
VLMGLPLAQA	10	Oxidation (M)	_VLM(Oxidation (M))GLPLAQA_		VLM(1)GLPLAQA		VLM(60)GLPLAQA	0	0	1		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.7924072146416	2	514.794078	1027.5736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.744	1	58.158	57.658	58.658	1.4145								0	0	0	0.0050554	1	23782	23782		60.39	26.287	1				38879	4539	19086	19164	45094	45094		77			0.06091857747992435
VLMGLPLAQA	10	Oxidation (M)	_VLM(Oxidation (M))GLPLAQA_		VLM(1)GLPLAQA		VLM(71)GLPLAQA	0	0	1		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MSMS	GG20161007_CRH_Patient100_W632_02	4	514.7928344607353	2	514.794078	1027.5736	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.179	1	58.148	57.648	58.648	1.9684								0	0	0	0.0017002	1	23560	23560		70.716	36.613	1				38880	4539	19086	19164	45095	45095		77			0.06091857747992435
VLMGLPLAQA	10	Unmodified	_VLMGLPLAQA_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7970458865166	2	506.79662	1011.57869	1.9432	0.00098479	0.58354	0.00029574	2.5267	0.0012805	506.796618778037	73.105	0.50171	73.105	72.81	73.312	0					49	15	4	0	0	0	0.069382	4	30401	30355;30401;30438;30478		70.716	34.671	1	15964000			38881	4539	19086	19165	45096;45097;45098;45099	45097					0.07336161610624004
VLMGLPLAQA	10	Unmodified	_VLMGLPLAQA_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	506.7978393435478	2	506.79662	1011.57869	2.3091	0.0011703	0.94105	0.00047692	3.2502	0.0016472	506.79718061966076	72.632	0.5363	72.957	72.611	73.147	0.32494					52	16	4	0	0	0	0.069382	4	30344	30299;30344;30395;30434		70.716	34.671	1	14166000			38882	4539	19086	19165	45100;45101;45102;45103	45101					0.07336161610624004
VLMGLPLAQA	10	Unmodified	_VLMGLPLAQA_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7980224490166	2	506.79662	1011.57869	2.429	0.001231	1.3453	0.00068179	3.7742	0.0019128	506.79697955411865	71.364	0.5466	72.705	72.42	72.967	1.3415					38	17	3	0	0	0	0.069382	1	29954	29954		70.716	34.671	1	22625000			38883	4539	19086	19165	45104	45104					0.07336161610624004
VLMGLPLAQA	10	Unmodified	_VLMGLPLAQA_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7981750369072	2	506.79662	1011.57869	0.95719	0.0004851	2.5891	0.0013121	3.5463	0.0017972	506.7979669215652	70.889	0.48293	72.727	72.472	72.955	1.8378					37	15	3	0	0	0	0.12027	2	29708	29708;29758		60.39	31.903	1	17409000			38884	4539	19086	19165	45105;45106	45105					0.07336161610624004
VLMGLPLAQA	10	Unmodified	_VLMGLPLAQA_					0	0	0		ENSG00000180155|ENST00000652477|LYNX1;nc|ENSG00000180155|P0DP58-2|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	ENSG00000180155|ENST00000652477|LYNX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.589770495892	1	1012.58596	1011.57869	0.9184	0.00092996	3.0961	0.0031351	4.0145	0.004065	1012.5898983624418	70.857	0.23932	72.695	72.561	72.801	1.8378					16	7	3	0	0	0	0.081078	2	29724	29724;29773		67.344	38.857	1	2928300			38885	4539	19086	19165	45107;45108	45107					0.07336161610624004
VLMHGPKL	8	Unmodified	_VLMHGPKL_					0	0	0		nc|ENSG00000185739|Q86TD4-3|SRL;ENSG00000185739|ENST00000399609|SRL;nc|ENSG00000185739|Q86TD4-1|SRL;CREBBP-SRL|1|fusion;CREBBP-SRL|2|fusion	nc|ENSG00000185739|Q86TD4-3|SRL	nc|ENSG00000185739|Q86TD4-3|SRL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	447.7660095095634	2	447.765123	893.515694	2.8301	0.0012672	0.1618	7.2449E-05	2.9919	0.0013396	447.76505287916825	72.387	0.45779	73.717	73.455	73.913	1.3297					36	14	3	0	0	0	0.89176	1	30358	30358		0.79363	0	1	7690600			38886	373	19087	19166	45109	45109					0.06467640613254844
VLMLQEPLL	9	Unmodified	_VLMLQEPLL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3141357302666	2	528.312103	1054.60965	3.035	0.0016034	0.2386	0.00012605	3.2736	0.0017295	528.313248712375	81.035	0.52281	82.269	82.041	82.564	1.2332					33	16	3	0	0	0	0.046276	2	34025	33980;34025		70.716	20.783	1	3593000			38887	3731	19088	19167	45110;45111	45111					0.08453314924872757
VLMLQEPLL	9	Unmodified	_VLMLQEPLL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3124877810478	2	528.312103	1054.60965	1.9771	0.0010445	1.0151	0.00053631	2.9922	0.0015808	528.3134366653417	80.57	0.58023	82.28	82.044	82.624	1.7103					35	18	3	0	0	0	0.066815	2	33780	33780;33829		61.357	16.95	1	2514100			38888	3731	19088	19167	45112;45113	45112					0.08453314924872757
VLMLQEPLL	9	Unmodified	_VLMLQEPLL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	528.312103	1054.60965	2.2546	0.0011912	0.44915	0.00023729	2.7038	0.0014285	528.3126713256025	82.559	0.24671	82.559	82.4	82.646	0	0.19443	-0.00024959	NaN	70.716	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1106400			38889	3731	19088	19167							0.08453314924872757
VLMLQEPLL	9	Unmodified	_VLMLQEPLL_					0	0	0		ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	ENSG00000163902|ENST00000296255|RPN1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	528.312103	1054.60965	2.2966	0.0012133	1.4644	0.00077365	3.761	0.001987	528.3133651927727	82.07	0.30732	82.35	82.151	82.459	0.2802	-0.014276	0.00082313	NaN	70.716	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	939100			38890	3731	19088	19167							0.08453314924872757
VLMQDSRLYL	10	Oxidation (M)	_VLM(Oxidation (M))QDSRLYL_		VLM(1)QDSRLYL		VLM(46)QDSRLYL	0	0	1		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	627.3339721560478	2	627.331556	1252.64856	2.0448	0.0012828	1.5631	0.00098057	3.6079	0.0022634	627.3325556074335	41.515	0.3519	41.515	41.307	41.659	0					17	10	2	0	0	0	0.2264	1	17392	17392		45.74	23.993	1	723450			38891	179	19089	19168	45114	45114		0			0.03233995488585606
VLMQDSRLYL	10	Oxidation (M)	_VLM(Oxidation (M))QDSRLYL_		VLM(1)QDSRLYL		VLM(46)QDSRLYL	0	0	1		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	627.3340331912041	2	627.331556	1252.64856	0.86033	0.00053971	1.7625	0.0011057	2.6229	0.0016454	627.3327617813105	39.023	0.35295	40.859	40.622	40.975	1.8366					17	10	2	0	0	0	0.2264	1	16356	16356		45.74	23.993	1	829810			38892	179	19089	19168	45115	45115		0			0.03233995488585606
VLMQDSRLYL	10	Unmodified	_VLMQDSRLYL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.3373901247978	2	619.334098	1236.65364	2.2651	0.0014028	-1.2159	-0.00075308	1.0491	0.00064975	619.3333637855184	53.074	0.34652	53.074	52.854	53.2	0					25	11	4	0	0	0	0.33708	2	22095	22095;22147		37.075	16.621	1	2226700			38893	179	19089	19169	45116;45117	45116					0.04478299351217174
VLMQDSRLYL	10	Unmodified	_VLMQDSRLYL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.3348266482353	2	619.334098	1236.65364	1.6074	0.00099553	-0.54104	-0.00033509	1.0664	0.00066044	619.3340410496121	52.483	0.30383	52.808	52.621	52.924	0.32553					23	9	3	0	0	0	0.24073	2	21999	21950;21999		43.982	18.583	1	2451400			38894	179	19089	19169	45118;45119	45119					0.04478299351217174
VLMQDSRLYL	10	Unmodified	_VLMQDSRLYL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.3345825076103	2	619.334098	1236.65364	0.35736	0.00022133	-0.027324	-1.6923E-05	0.33004	0.0002044	619.3345257329833	51.211	0.39931	52.605	52.437	52.836	1.3938					35	12	4	0	0	0	0.18015	2	21461	21410;21461		51.415	19.11	1	8459600			38895	179	19089	19169	45120;45121	45121					0.04478299351217174
VLMQDSRLYL	10	Unmodified	_VLMQDSRLYL_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1;nc|ENSG00000170312|P06493-2|CDK1;chr10:60785787-60791890|413|13.74|0.51|4.76|+|ENST00000373809|CDK1,CDK1;ENST00000475504.6_1_10:62539923-62545554:+|nuORF	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.3348876833916	2	619.334098	1236.65364	0.15627	9.6782E-05	0.16541	0.00010244	0.32168	0.00019923	619.3346414915428	50.646	0.39431	52.621	52.425	52.819	1.9753					29	12	3	0	0	0	0.2241	2	21225	21179;21225		46.022	20.623	1	7820100			38896	179	19089	19169	45122;45123	45123					0.04478299351217174
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(58)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3004028201103	2	539.29665	1076.57875	1.6488	0.00088921	2.5063	0.0013516	4.1551	0.0022408	539.2990272284085	42.699	0.30965	42.699	42.509	42.819	0					21	9	3	0	0	0	0.075994	1	17857	17857		57.722	30.838	1	1312800			38897	1886	19090	19170	45124	45124		34			0.04352116819973162
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(42)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.2974120974541	2	539.29665	1076.57875	1.822	0.00098262	0.33808	0.00018232	2.1601	0.0011649	539.2968646998177	42.296	0.27568	42.616	42.482	42.758	0.32058					18	8	3	0	0	0	0.12216	1	17752	17752		41.956	12.874	1	1346800			38898	1886	19090	19170	45125	45125		34			0.04352116819973162
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(58)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2949706912041	2	539.29665	1076.57875	2.4557	0.0013243	-3.3723	-0.0018187	-0.91658	-0.00049431	539.2942857284337	40.627	0.55473	41.941	41.581	42.135	1.3138					36	17	3	0	0	0	0.075994	2	17016	17016;17067		57.722	23.62	1	2854300			38899	1886	19090	19170	45126;45127	45126		34			0.04352116819973162
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(58)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3013183474541	2	539.29665	1076.57875	2.4581	0.0013256	1.5421	0.00083165	4.0002	0.0021573	539.2978590875665	40.995	0.47167	42.321	42.115	42.587	1.3254					28	14	3	0	0	0	0.075994	2	17174	17174;17225		57.722	29.235	1	2647800			38900	1886	19090	19170	45128;45129	45128		34			0.04352116819973162
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(58)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.2973510622978	2	539.29665	1076.57875	2.0958	0.0011303	-2.5776	-0.0013901	-0.48179	-0.00025983	539.2958439070878	40.288	0.55748	42.15	41.707	42.265	1.8624					32	17	3	0	0	0	0.075994	2	16899	16854;16899		57.722	25.416	1	2306500			38901	1886	19090	19170	45130;45131	45131		34			0.04352116819973162
VLMTEDIKL	9	Oxidation (M)	_VLM(Oxidation (M))TEDIKL_		VLM(1)TEDIKL		VLM(58)TEDIKL	0	0	1		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3001586794853	2	539.29665	1076.57875	2.2384	0.0012072	1.5593	0.00084091	3.7977	0.0020481	539.2980884201103	40.575	0.50451	42.437	42.265	42.769	1.8624					29	15	3	0	0	0	0.075994	2	17044	16992;17044		57.722	21.678	1	2033400			38902	1886	19090	19170	45132;45133	45133		34			0.04352116819973162
VLMTEDIKL	9	Unmodified	_VLMTEDIKL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	531.2994872927666	2	531.299193	1060.58383	1.9721	0.0010478	-0.96712	-0.00051383	1.005	0.00053394	531.2984347442514	53.416	0.35737	53.416	53.225	53.583	0					31	12	3	0	0	0	0.053939	2	22251	22251;22301		66.457	24.617	1	8395200			38903	1886	19090	19171	45134;45135	45134					0.05596420682581993
VLMTEDIKL	9	Unmodified	_VLMTEDIKL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	531.2991210818291	2	531.299193	1060.58383	1.8599	0.00098814	-1.2961	-0.00068863	0.56373	0.00029951	531.2985589348644	52.792	0.55281	53.114	52.922	53.475	0.32283					37	18	3	0	0	0	0.015029	2	22099	22099;22135		103.35	46.178	1	10600000			38904	1886	19090	19171	45136;45137	45136					0.05596420682581993
VLMTEDIKL	9	Unmodified	_VLMTEDIKL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.2987548708916	2	531.299193	1060.58383	0.85373	0.00045359	-1.368	-0.0007268	-0.51423	-0.00027321	531.29851666465	51.6	0.51415	52.997	52.776	53.29	1.3966					40	17	3	0	0	0	0.026734	2	21570	21570;21620		92.653	36.476	1	39096000			38905	1886	19090	19171	45138;45139	45138					0.05596420682581993
VLMTEDIKL	9	Unmodified	_VLMTEDIKL_					0	0	0		nc|ENSG00000114867|Q04637-4|EIF4G1;nc|ENSG00000114867|Q04637-3|EIF4G1;ENSG00000114867|ENST00000346169|EIF4G1;nc|ENSG00000114867|Q04637-8|EIF4G1;nc|ENSG00000114867|Q04637-9|EIF4G1;EIF4G1|p.E1239Rfs*4|1|0.06|ENSG00000114867|chr3:184327639-184327639|G/-|frameshift_variant;ENST00000442406.5_1_3:184038690-184052693:+|nuORF;nc|ENSG00000114867|Q04637-6|EIF4G1;nc|ENSG00000114867|Q04637-7|EIF4G1;nc|ENSG00000114867|Q04637-5|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	nc|ENSG00000114867|Q04637-4|EIF4G1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2981445193291	2	531.299193	1060.58383	-0.062961	-3.3451E-05	-1.4574	-0.00077432	-1.5204	-0.00080778	531.2984867486807	50.978	0.40756	52.953	52.757	53.165	1.9753					39	14	3	0	0	0	0.0069529	3	21373	21328;21373;21418		114.65	49.414	1	38136000			38906	1886	19090	19171	45140;45141;45142	45141					0.05596420682581993
VLMWEIFTL	9	Oxidation (M)	_VLM(Oxidation (M))WEIFTL_		VLM(1)WEIFTL		VLM(64)WEIFTL	0	0	1		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	584.3116332888603	2	584.309561	1166.60457	1.5205	0.00088847	2.055	0.0012008	3.5756	0.0020892	584.3105395259653	97.383	0.15691	97.383	97.289	97.446	0					10	4	3	0	0	0	0.061246	1	40711	40711		63.563	38.164	1	2447200			38907	807	19091	19172	45143	45143		11			0.027930110622492066
VLMWEIFTL	9	Oxidation (M)	_VLM(Oxidation (M))WEIFTL_		VLM(1)WEIFTL		VLM(54)WEIFTL	0	0	1		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3105956912041	2	584.309561	1166.60457	2.6173	0.0015293	1.0949	0.00063974	3.7122	0.002169	584.3096637958424	97.311	0.12765	97.402	97.303	97.431	0.090889					6	3	2	0	0	0	0.087207	1	40707	40707		53.576	23.351	1	1404100			38908	807	19091	19172	45144	45144		11			0.027930110622492066
VLMWEIFTL	9	Oxidation (M)	_VLM(Oxidation (M))WEIFTL_		VLM(1)WEIFTL		VLM(82)WEIFTL	0	0	1		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3127929568291	2	584.309561	1166.60457	3.7163	0.0021715	2.9371	0.0017161	6.6533	0.0038876	584.3115938777556	97.122	0.14967	97.406	97.328	97.478	0.28442					6	4	2	0	0	0	0.033521	1	40869	40869		81.864	45.82	1	2800400			38909	807	19091	19172	45145	45145		11			0.027930110622492066
VLMWEIFTL	9	Oxidation (M)	_VLM(Oxidation (M))WEIFTL_		VLM(1)WEIFTL		VLM(54)WEIFTL	0	0	1		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3123657107353	2	584.309561	1166.60457	3.1997	0.0018696	1.2963	0.00075745	4.4961	0.0026271	584.3100244591503	97.026	0.12241	97.332	97.258	97.38	0.30619					9	3	3	0	0	0	0.087207	1	40823	40823		53.576	26.692	1	3632300			38910	807	19091	19172	45146	45146		11			0.027930110622492066
VLMWEIFTL	9	Unmodified	_VLMWEIFTL_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	576.0312377810478	2	576.312103	1150.60965	2.6377	0.0015202	3.4644	0.0019966	6.1021	0.0035167	576.314214158485	99.08	0.093353	99.161	99.114	99.207	0.080376					4	2	2	0	0	0	0.025182	1	41480	41480		60.39	18.55	1	4186400			38911	807	19091	19173	45147	45147					0.04037314924880775
VLMWELEK	8	Unmodified	_VLMWELEK_					0	0	0		NCOA2-EIF3H|1|fusion;RAD21-EIF3H|1|fusion;ENSG00000147677|ENST00000521861|EIF3H;RAD21-EIF3H|3|fusion;RAD21-EIF3H|2|fusion;RAD21-EIF3H|4|fusion	NCOA2-EIF3H|1|fusion	NCOA2-EIF3H|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	524.2806274294853	2	524.280803	1046.54705	1.947	0.0010208	-1.6657	-0.00087328	0.28131	0.00014748	524.279878572101	73.297	1.5248	73.297	72.745	74.27	0					94	48	3	0	0	0	0.87803	1	30709	30709		10.183	0	1	1862200			38912	8034	19092	19174	45148	45148					0.025641688566793164
VLNAINRRKQ	10	Unmodified	_VLNAINRRKQ_					0	0	0		ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3702880740166	2	606.370195	1210.72584	2.1371	0.0012959	-1.3018	-0.00078939	0.83528	0.00050649	606.369326866515	77.237	1.3452	77.237	77.063	78.409	0					115	42	3	0	0	0	0.87699	1	32433	32433		3.9444	0.3479	1	8472300			38913	4367	19093	19175	45149	45149					0.12890394539795125
VLNAINRRKQ	10	Unmodified	_VLNAINRRKQ_					0	0	0		ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	606.3706542849541	2	606.370195	1210.72584	1.7725	0.0010748	-0.12374	-7.5033E-05	1.6488	0.00099978	606.3700463354238	77.81	0.60337	78.126	77.919	78.522	0.31564					47	18	3	0	0	0	0.89803	2	32501	32501;32606		1.6526	0.17072	1	2709800			38914	4367	19093	19175	45150;45151	45150					0.12890394539795125
VLNAINRRKQ	10	Unmodified	_VLNAINRRKQ_					0	0	0		ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	ENSG00000175311|ENST00000311620|ANKS4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3718139529228	2	606.370195	1210.72584	2.6989	0.0016366	-0.80005	-0.00048513	1.8989	0.0011514	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	0.87699	3	32026	32026;32076;32124		3.9444	0.3479	1	6855700			38915	4367	19093	19175	45152;45153;45154	45152					0.12890394539795125
VLNFLSFMTI	10	Unmodified	_VLNFLSFMTI_					0	0	0		ENST00000508369.5_1_4:89689209-89702404:-|nuORF	ENST00000508369.5_1_4:89689209-89702404:-|nuORF	ENST00000508369.5_1_4:89689209-89702404:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	592.8240844607353	2	592.822835	1183.63112	1.7069	0.0010119	1.9111	0.001133	3.6181	0.0021449	592.8237249821219	97.37	0.12447	97.37	97.321	97.446	0					8	3	3	0	0	0	0.80568	1	40714	40714		11.64	0	1	1680400			38916	7017	19094	19176	45155	45155					0.04664699953582385
VLNFLSFMTI	10	Unmodified	_VLNFLSFMTI_					0	0	0		ENST00000508369.5_1_4:89689209-89702404:-|nuORF	ENST00000508369.5_1_4:89689209-89702404:-|nuORF	ENST00000508369.5_1_4:89689209-89702404:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	592.8260375857353	2	592.822835	1183.63112	2.6195	0.0015529	2.5642	0.0015201	5.1837	0.003073	592.8247906228819	97.305	0.12765	97.395	97.303	97.431	0.090881					6	3	2	0	0	0	0.80568	1	40718	40718		11.64	0	1	1064500			38917	7017	19094	19176	45156	45156					0.04664699953582385
VLNINPPLQV	10	Unmodified	_VLNINPPLQV_					0	0	0			REV__ENSG00000178764|ENST00000314393|ZHX2	REV__ENSG00000178764|ENST00000314393|ZHX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8320800662041	2	553.832049	1105.64954	1.3705	0.00075904	-2.489	-0.0013785	-1.1185	-0.00061944	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	0.89803	1	31177	31177		1.4819	0.28856	1	2354100	+		38918	11253	19095	19177	45157	45157					0.10094577919790026
VLNKQMVRLKW	11	Unmodified	_VLNKQMVRLKW_					0	0	0		ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2845947146416	3	472.28323	1413.82786	3.0072	0.0014202	0.10898	5.147E-05	3.1162	0.0014717	472.28301369630935	85.084	1.203	85.084	84.43	85.633	0					85	37	3	0	0	0	1.039	1	35447	35447		0.45452	0.046251	1	1971900			38919	83	19096	19178	45158	45158					0.13749924567196103
VLNKQMVRLKW	11	Unmodified	_VLNKQMVRLKW_					0	0	0		ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2841369509697	3	472.28323	1413.82786	3.1183	0.0014727	-2.9154	-0.0013769	0.20288	9.5818E-05	472.28123472315633	87.177	1.8927	87.177	86.84	88.732	0					108	67	2	0	0	0	1.039	1	36876	36876		0.45452	0.046251	1	5550500			38920	83	19096	19178	45159	45159					0.13749924567196103
VLNKQMVRLKW	11	Unmodified	_VLNKQMVRLKW_					0	0	0		ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	ASRGL1|p.T71Kfs*29|1|0.27|ENSG00000162174|chr11:62356344-62356345|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2854797244072	3	472.28323	1413.82786	3.3354	0.0015752	0.53056	0.00025058	3.8659	0.0018258	472.28333069559534	87.104	1.4196	87.348	87.22	88.64	0.24387					116	47	3	0	0	0	1.039	1	36702	36702		0.45452	0	1	4354100			38921	83	19096	19178	45160	45160					0.13749924567196103
VLNKRFIE	8	Unmodified	_VLNKRFIE_					0	0	0			REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	REV__tr|A0A7D7A2L5|A0A7D7A2L5_9CLOTDEAD/DEAHboxhelicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_17590PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8046447634697	2	509.805834	1017.59712	1.615	0.00082333	-2.4533	-0.0012507	-0.83831	-0.00042737	509.80423819115066	68.85	1.3796	69.172	68.813	70.192	0.32224					95	43	3	0	0	0	0.88504	1	28789	28789		5.7604	0	1	1556700	+		38922	15853	19097	19179	45161	45161					0.08902039576832976
VLNKVITVYA	10	Unmodified	_VLNKVITVYA_					0	0	0		nc|ENSG00000136051|Q2M389-2|WASHC4;ENST00000311317.8_1_12:105501518-105541426:+|nuORF;ENSG00000136051|ENST00000332180|WASHC4	nc|ENSG00000136051|Q2M389-2|WASHC4	nc|ENSG00000136051|Q2M389-2|WASHC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3446533083916	2	560.342249	1118.66995	4.6953	0.002631	-0.69942	-0.00039191	3.9959	0.0022391	560.3416902405552	87.544	0.59129	88.635	88.335	88.926	1.0918					62	18	5	0	0	0	0.89646	1	36946	36946		1.8442	0.19162	1	40715000			38923	2704	19098	19180	45162	45162					0.11535748579603933
VLNLGQAL	8	Unmodified	_VLNLGQAL_					0	0	0		ENSG00000125676|ENST00000245838|THOC2;ENST00000464161.1_1_X:122757636-122758442:-|nuORF	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	414.3007385134697	2	414.252903	826.491253	2.9542	0.0012238	1.2449	0.00051572	4.1991	0.0017395	414.253642772262	103.96	0.074493	104.12	104.07	104.15	0.16055					7	3	3	0	0	0	2.3239	1	43968	43968		0	0	1	20616000			38924	2270	19099	19181	45163	45163					0.07106703731381003
VLNLKALIF	9	Unmodified	_VLNLKALIF_					0	0	0		RB1|p.F526Lfs*6|1|0.53|ENSG00000139687|chr13:48381322-48381322|C/-|frameshift_variant	RB1|p.F526Lfs*6|1|0.53|ENSG00000139687|chr13:48381322-48381322|C/-|frameshift_variant	RB1|p.F526Lfs*6|1|0.53|ENSG00000139687|chr13:48381322-48381322|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2281371951103	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.212	1	28.959	28.459	29.459	1.747								0	0	0	0.42693	1	11388	11388		2.7352	0	1				38925	8067	19100	19182	45164	45164					0.14500971276129349
VLNLKNPVL	9	Unmodified	_VLNLKNPVL_					0	0	0		tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	tr|A0A553SGP1|A0A553SGP1_NIACIPhosphoribosylformylglycinamidinecyclo-ligaseOS=NialliacirculansOX=1397GN=purMPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	505.3253967165947	2	505.32386	1008.63317	2.5589	0.0012931	-0.69338	-0.00035038	1.8655	0.0009427	505.3234566556559	40.339	0.39835	41.649	41.421	41.819	1.3102					21	12	2	0	0	0	0.64949	2	16867	16867;16967		9.3474	0	1	5533700			38926	16114	19101	19183	45165;45166	45165					0.12919496753693238
VLNLQLNAH	9	Unmodified	_VLNLQLNAH_					0	0	0		tr|A0A553SRN2|A0A553SRN2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01345PE=4SV=1	tr|A0A553SRN2|A0A553SRN2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01345PE=4SV=1	tr|A0A553SRN2|A0A553SRN2_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_01345PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	341.1949951052666	3	341.197819	1020.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.369	1	79.369	78.869	79.869	0								0	0	0	0.42693	1	33047	33047		0.96228	0	1				38927	16569	19102	19184	45167	45167					0.06216565054421608
VLNLTLVDL	9	Unmodified	_VLNLTLVDL_					0	0	0		DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant;ENST00000441149.6_1_9:130980552-131010310:+|nuORF;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-2|DNM1;ENSG00000106976|ENST00000372923|DNM1	DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant	DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3087036013603	2	500.307875	998.601197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.538	1	39.834	39.334	40.334	1.2961								0	0	0	0.24667	1	16171	16171		22.736	0	1				38928	423	19103	19185	45168	45168					0.10184084279887884
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.3153564333916	2	478.312961	954.611368	3.5503	0.0016982	-0.91756	-0.00043888	2.6328	0.0012593	478.3125504843424	106.12	0.14204	106.18	106.1	106.25	0.05455					24	6	5	0	0	0	0.83753	1	45129	45129		1.8442	0.19162	1	170220000			38929	17217	19104	19186	45169	45169					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	955.6212036013603	1	955.618645	954.611368	2.7768	0.0026536	-0.76179	-0.00072798	2.015	0.0019256	955.6178259444999	107.69	0.1652	107.74	107.64	107.8	0.052452					21	8	3	0	0	0	0.85019	1	46107	46107		0.52476	0	1	56235000			38930	17217	19104	19186	45170	45170					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3138305544853	2	478.312961	954.611368	3.2661	0.0015622	-0.76111	-0.00036405	2.5049	0.0011981	478.3125431604834	106.1	0.19471	106.26	106.16	106.35	0.15781					39	10	5	0	0	0	0.83753	1	45393	45393		1.8442	0.19162	1	1071799999.9999999			38931	17217	19104	19186	45171	45171					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	955.6192504763603	1	955.618645	954.611368	2.357	0.0022524	-0.77085	-0.00073663	1.5862	0.0015158	955.6177046007743	107.66	0.19791	107.82	107.72	107.92	0.15781					34	10	5	0	0	0	0.85019	1	46408	46408		0.52476	0	1	1032699999.9999999			38932	17217	19104	19186	45172	45172					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3138915896416	2	478.312961	954.611368	3.2599	0.0015593	-1.4332	-0.00068552	1.8267	0.00087375	478.31220303290996	106.07	0.17654	106.23	106.15	106.33	0.16174					37	9	5	0	0	0	0.83753	1	45252	45252		1.8442	0.19162	1	747440000			38933	17217	19104	19186	45173	45173					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	955.6195556521416	1	955.618645	954.611368	3.4258	0.0032738	-2.6055	-0.0024899	0.82028	0.00078388	955.6160391120237	107.66	0.20434	107.82	107.68	107.88	0.15795					32	10	4	0	0	0	0.85019	1	46269	46269		0.52476	0	1	649990000			38934	17217	19104	19186	45174	45174					0.13224692005121597
VLNLVLITA	9	Unmodified	_VLNLVLITA_					0	0	0		tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	tr|A0A7D7A020|A0A7D7A020_9CLOTAminoacidpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08585PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	955.618645	954.611368	1.1728	0.0011207	-0.26422	-0.0002525	0.90855	0.00086822	955.6177002088576	107.69	0.14711	107.69	107.62	107.77	0	-0.057397	0.00034091	NaN	0.52476	25	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	75277000			38935	17217	19104	19186							0.13224692005121597
VLNNLRVFLIF	11	Unmodified	_VLNNLRVFLIF_					0	0	0		VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant;nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D;ENST00000487188.1_1_1:12371595-12395946:+|nuORF;ENST00000460333.5_1_1:12359354-12409038:+|nuORF	VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant	VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9445678591728	3	449.943091	1346.80744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.746	1	77.045	76.545	77.545	1.2995								0	0	0	0.63775	1	31791	31791		5.0475	0.3316	1				38936	686	19105	19187	45175	45175					0.14791077179029344
VLNQLLSFTV	10	Unmodified	_VLNQLLSFTV_					0	0	0		PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant;ENSG00000130943|ENST00000253255|PKDREJ	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	PKDREJ|p.H2048Tfs*3|1|0.05|ENSG00000130943|chr22:46257182-46257182|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3320190310478	2	567.331882	1132.64921	1.8389	0.0010433	-2.826	-0.0016033	-0.98707	-0.00056	567.330149483754	72.639	1.5212	72.964	71.85	73.371	0.32494					110	47	3	0	0	0	0.88579	1	30245	30245		2.9952	0.69251	1	2390700			38937	2472	19106	19188	45176	45176					0.0881915819995811
VLNRLNSRLEI	11	Unmodified	_VLNRLNSRLEI_					0	0	0		L1MEf_dup11696|chr22:19793158-19794011:+|1.3999327460046636|0.4439510689387073|1.66|429.0|21|3|sense	L1MEf_dup11696|chr22:19793158-19794011:+|1.3999327460046636|0.4439510689387073|1.66|429.0|21|3|sense	L1MEf_dup11696|chr22:19793158-19794011:+|1.3999327460046636|0.4439510689387073|1.66|429.0|21|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8964721560478	2	663.896243	1325.77793	3.0629	0.0020334	-0.17079	-0.00011339	2.8921	0.00192	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0362	1	34675	34675		1.3295	0	1	4887400			38938	7718	19107	19189	45177	45177					0.12807513162874784
VLNRSKRF	8	Unmodified	_VLNRSKRF_					0	0	0		nc|ENSG849|O42043|ERVK-18_env;nc|ENSG836|P61566|ERVK-24_env;nc|ENSG819|P61567|ERVK-7_env;nc|ENSG833|P61570|ERVK-25_env;nc|ENSG840|P61565|ERVK-21_env;nc|ENSG811|Q9UKH3|ERVK-9_env;nc|ENSG845|O71037|ERVK-19_env;nc|ENSG825|Q69384|ERVK-6_env;nc|ENSG815|Q902F8|ERVK-8_env;nc|ENSG802|Q902F9|HERVK_113_env;nc|ENSG821|P63135|ERVK-7_pol	nc|ENSG849|O42043|ERVK-18_env	nc|ENSG849|O42043|ERVK-18_env	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8054382205009	2	510.309075	1018.6036	1.9542	0.00099724	0.90775	0.00046323	2.8619	0.0014605	510.3094859473953	67.159	2.1326	67.481	66.557	68.69	0.32269					159	65	5	0	0	0	0.88504	1	28500	28500		5.7604	0	1	98417000			38939	8027	19108	19190	45178	45178					0.09503977528220275
VLNTIMVII	9	Unmodified	_VLNTIMVII_					0	0	0			REV__ENST00000475012.5_1_3:62203523-62278979:+|nuORF	REV__ENST00000475012.5_1_3:62203523-62278979:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.3162414431572	2	508.314646	1014.61474	3.0527	0.0015517	0.16819	8.5492E-05	3.2209	0.0016372	508.31493343719023	75.294	0.33231	76.6	76.435	76.768	1.3063					20	10	2	0	0	0	0.17276	1	31640	31640		36.127	5.9022	1	1968700	+		38940	10259	19109	19191	45179	45179					0.10801618787490952
VLNTRIICP	9	Unmodified	_VLNTRIICP_					0	0	0		nc|ENSG00000102780|Q86XP1-5|DGKH;nc|ENSG00000102780|Q86XP1-3|DGKH;nc|ENSG00000102780|Q86XP1-2|DGKH;ENSG00000102780|ENST00000337343|DGKH;ENST00000498255.6_1_13:42728006-42769963:+|nuORF	nc|ENSG00000102780|Q86XP1-5|DGKH	nc|ENSG00000102780|Q86XP1-5|DGKH	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5349609255791	3	343.535555	1027.58484	-2.0263	-0.0006961	0.45678	0.00015692	-1.5695	-0.00053918	343.5356602626655	26.548	0.93198	26.548	26.237	27.169	0					58	28	4	0	0	0	0.81521	1	11095	11095		2.7352	0.23671	1	3286500			38941	1398	19110	19192	45180	45180					0.07214679842149962
VLNTRTAR	8	Unmodified	_VLNTRTAR_					0	0	0			REV__WNT2B|p.D298N|1|0.31|ENSG00000134245|chr1:112517331-112517331|G/A|missense_variant	REV__WNT2B|p.D298N|1|0.31|ENSG00000134245|chr1:112517331-112517331|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.7780944705009	2	465.777608	929.540663	2.1314	0.00099276	-0.74317	-0.00034615	1.3882	0.0006466	465.7771367971994	77.68	0.52948	77.68	77.44	77.969	0					46	16	4	0	0	0	0.89178	1	32337	32337		0.69038	0	1	18280000	+		38942	15936	19111	19193	45181	45181					0.07307411740168845
VLNVHGRRVT	10	Unmodified	_VLNVHGRRVT_					0	0	0		ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	ENST00000268616.8_1_16:87441547-87441679:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8456909060478	2	575.843813	1149.67307	2.1198	0.0012207	-0.53427	-0.00030766	1.5856	0.00091304	575.8430449813728	76.177	1.4338	76.499	76.209	77.642	0.32163					83	45	2	0	0	0	0.89803	1	32080	32080		1.4819	0.15237	1	3953600			38943	5665	19112	19194	45182	45182					0.10422436476960684
VLNVHLHI	8	Unmodified	_VLNVHLHI_					0	0	0			REV__nc|ENSG00000175175|Q8WY54-3|PPM1E	REV__nc|ENSG00000175175|Q8WY54-3|PPM1E	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.7863647341728	2	472.787444	943.560336	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.155	1	68.478	67.978	68.978	0.32269								0	0	0	1.0178	1	28530	28530		10.183	0.83596	1		+		38944	11145	19113	19195	45183	45183					0.08629787750930973
VLNVQAKPKP	10	Unmodified	_VLNVQAKPKP_					0	0	0		ENSG00000169239|ENST00000318636|CA5B	ENSG00000169239|ENST00000318636|CA5B	ENSG00000169239|ENST00000318636|CA5B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	547.3388549685478	2	547.340041	1092.66553	1.5187	0.00083124	-2.4813	-0.0013581	-0.96259	-0.00052686	547.3382657414228	94.181	0.43155	94.181	93.994	94.425	0					29	13	3	0	0	0	0.89803	2	39334	39334;39387		1.6526	0	1	1337200			38945	4077	19114	19196	45184;45185	45184					0.12290284156688358
VLNVVHKVKL	10	Unmodified	_VLNVVHKVKL_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8795043826103	2	574.879333	1147.74411	3.2637	0.0018762	-2.9668	-0.0017056	0.29683	0.00017064	574.8775192189624	105.96	0.19334	106.12	106.03	106.23	0.16679					31	9	5	0	0	0	0.89803	1	45236	45236		0.40072	0	1	729820000	+		38946	10240	19115	19197	45186	45186					0.17615136461790826
VLNVVHKVKL	10	Unmodified	_VLNVVHKVKL_					0	0	0			REV__nc|ENSG00000144285|P35498-3|SCN1A	REV__nc|ENSG00000144285|P35498-3|SCN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1148.751513659954	1	1148.75139	1147.74411	2.9633	0.0034041	-2.3397	-0.0026877	0.62365	0.00071642	1148.7486224038594	107.43	0.19449	107.59	107.5	107.7	0.15795					28	9	4	0	0	0	0.89803	1	46153	46153		0.40072	0	1	77055000	+		38947	10240	19115	19197	45187	45187					0.17615136461790826
VLNWRFFI	8	Unmodified	_VLNWRFFI_					0	0	0			REV__AluSx1_dup24042|chr4:1707256-1707512:+|5.585385029576119|0.0259612949045891|7.75|429.0|15|3|anti-sense	REV__AluSx1_dup24042|chr4:1707256-1707512:+|5.585385029576119|0.0259612949045891|7.75|429.0|15|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.8127319216728	2	547.810919	1093.60729	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.23	1	68.619	68.119	69.119	1.3888								0	0	0	1.0178	1	28205	28205		22.453	1.5814	1		+		38948	8114	19116	19198	45188	45188					0.06422647302065343
VLNYTFSDYN	10	Unmodified	_VLNYTFSDYN_					0	0	0			REV__tr|A0A553SHF4|A0A553SHF4_NIACIAminodeoxychorismate/anthranilatesynthasecomponentIIOS=NialliacirculansOX=1397GN=pabAPE=4SV=1	REV__tr|A0A553SHF4|A0A553SHF4_NIACIAminodeoxychorismate/anthranilatesynthasecomponentIIOS=NialliacirculansOX=1397GN=pabAPE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.5236083865166	3	412.524149	1234.55062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.959	1	30.242	29.742	30.742	1.2825								0	0	0	0.66222	1	12144	12144		0.69767	0.55777	1		+		38949	14791	19117	19199	45189	45189					-0.05727489835749111
VLPALLALLAP	11	Unmodified	_VLPALLALLAP_					0	0	0			REV__chr17:50189912-50190327|133|630.23|0.35|10.83|-|1|COL1A1,COL1A1|1	REV__chr17:50189912-50190327|133|630.23|0.35|10.83|-|1|COL1A1,COL1A1|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8650390505791	2	545.86536	1089.71617	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.19552	1	0.93131	0.43131	1.4313	0.73579								0	0	0	0.63775	1	79	79		0	0	1		+		38950	8275	19118	19200	45190	45190					0.17489813481688543
VLPCRPPI	8	Unmodified	_VLPCRPPI_					0	0	0		nc|ENSG00000091129|Q92823-2|NRCAM;ENSG00000091129|ENST00000379028|NRCAM;nc|ENSG00000091129|Q92823-5|NRCAM;nc|ENSG00000091129|Q92823-3|NRCAM;nc|ENSG00000091129|Q92823-4|NRCAM;nc|ENSG00000091129|Q92823-6|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	nc|ENSG00000091129|Q92823-2|NRCAM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	447.7662841677666	2	447.765123	893.515694	2.8047	0.0012558	-0.086711	-3.8826E-05	2.718	0.001217	447.7650438141742	71.969	0.80282	73.793	73.253	74.056	1.8239					60	25	4	0	0	0	0.89008	1	30254	30254		2.5775	0	1	12041000			38951	1147	19119	19201	45191	45191					0.06467640613232106
VLPDMFFSF	9	Unmodified	_VLPDMFFSF_					0	0	0		ENST00000562567.6_1_16:68267161-68268061:-|nuORF;ENST00000563159.5_1_16:68267455-68268061:-|nuORF;ENST00000564465.1_1_16:68267455-68269590:-|nuORF;ENST00000569964.5_1_16:68267161-68269644:-|nuORF;ENST00000251366.7_1_16:68266662-68269948:-|nuORF;ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.7683593630791	2	551.767529	1101.5205	3.6038	0.0019885	-1.6495	-0.00091015	1.9543	0.0010783	551.7670632819611	97.028	0.20406	97.312	97.218	97.422	0.28442					22	7	4	0	0	0	0.076627	2	40808	40808;40853		57.471	30.588	1	27862000			38952	1418	19120	19202	45192;45193	45192					-0.0261952003463648
VLPDMFFSF	9	Unmodified	_VLPDMFFSF_					0	0	0		ENST00000562567.6_1_16:68267161-68268061:-|nuORF;ENST00000563159.5_1_16:68267455-68268061:-|nuORF;ENST00000564465.1_1_16:68267455-68269590:-|nuORF;ENST00000569964.5_1_16:68267161-68269644:-|nuORF;ENST00000251366.7_1_16:68266662-68269948:-|nuORF;ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1102.529467761517	1	1102.52778	1101.5205	3.4095	0.003759	-1.2613	-0.0013906	2.1482	0.0023684	1102.5267754381296	97.01	0.17224	97.294	97.218	97.39	0.28442					10	6	2	0	0	0	0.037761	1	40815	40815		78.149	49.068	1	15562000			38953	1418	19120	19202	45194	45194					-0.0261952003463648
VLPDMFFSF	9	Unmodified	_VLPDMFFSF_					0	0	0		ENST00000562567.6_1_16:68267161-68268061:-|nuORF;ENST00000563159.5_1_16:68267455-68268061:-|nuORF;ENST00000564465.1_1_16:68267455-68269590:-|nuORF;ENST00000569964.5_1_16:68267161-68269644:-|nuORF;ENST00000251366.7_1_16:68266662-68269948:-|nuORF;ENSG00000103067|ENST00000473183|ESRP2;nc|ENSG00000103067|Q9H6T0|ESRP2	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	ENST00000562567.6_1_16:68267161-68268061:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.7705566287041	2	551.767529	1101.5205	3.1804	0.0017549	0.16838	9.2907E-05	3.3488	0.0018478	551.7680428107948	96.906	0.24946	97.212	97.101	97.35	0.3062					15	7	3	0	0	0	0.076627	2	40752	40752;40790		57.471	32.072	1	15876000			38954	1418	19120	19202	45195;45196	45195					-0.0261952003463648
VLPEHVSVL	9	Unmodified	_VLPEHVSVL_					0	0	0		ENSG00000178567|ENST00000322716|EPM2AIP1	ENSG00000178567|ENST00000322716|EPM2AIP1	ENSG00000178567|ENST00000322716|EPM2AIP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7940246462822	2	496.792392	991.570232	2.3015	0.0011434	1.3183	0.00065494	3.6198	0.0017983	496.7933614239979	39.432	0.44947	40.734	40.48	40.93	1.3014					22	14	2	0	0	0	0.22519	1	16556	16556		30.225	0	1	2070200			38955	4487	19121	19203	45197	45197					0.07410930965670559
VLPFHLVI	8	Unmodified	_VLPFHLVI_					0	0	0			REV__ENSG00000168907|ENST00000397272|PLA2G4F	REV__ENSG00000168907|ENST00000397272|PLA2G4F	MSMS	GG20161007_CRH_Patient100_A02_02	2	313.2005187869072	3	313.200501	936.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.12	1	102.19	101.69	102.69	0.062805								0	0	0	1.0178	1	42761	42761		1.8442	0	1		+		38956	10925	19122	19204	45198	45198					0.10884744041845806
VLPFHLVI	8	Unmodified	_VLPFHLVI_					0	0	0			REV__ENSG00000168907|ENST00000397272|PLA2G4F	REV__ENSG00000168907|ENST00000397272|PLA2G4F	MSMS	GG20161007_CRH_Patient100_W632_01	3	313.2009765505791	3	313.200501	936.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.03	1	102.2	101.7	102.7	0.17032								0	0	0	1.0178	1	42931	42931		1.8442	0	1		+		38957	10925	19122	19204	45199	45199					0.10884744041845806
VLPFHLVI	8	Unmodified	_VLPFHLVI_					0	0	0			REV__ENSG00000168907|ENST00000397272|PLA2G4F	REV__ENSG00000168907|ENST00000397272|PLA2G4F	MSMS	GG20161007_CRH_Patient100_W632_02	4	313.2003967165947	3	313.200501	936.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.96	1	102.15	101.65	102.65	0.19076								0	0	0	1.0178	1	42872	42872		1.8442	0	1		+		38958	10925	19122	19204	45200	45200					0.10884744041845806
VLPFKVAKD	9	Unmodified	_VLPFKVAKD_					0	0	0		RTCA|p.A199T|1|0.08|ENSG00000137996|chr1:100274945-100274945|G/A|missense_variant;ENSG00000137996|ENST00000370128|RTCA;nc|ENSG00000137996|O00442-2|RTCA	RTCA|p.A199T|1|0.08|ENSG00000137996|chr1:100274945-100274945|G/A|missense_variant	RTCA|p.A199T|1|0.08|ENSG00000137996|chr1:100274945-100274945|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8098937869072	2	508.810585	1015.60662	1.1201	0.0005699	1.4201	0.00072255	2.5401	0.0012925	508.81151892073825	52.958	0.3861	54.359	54.152	54.538	1.4005					29	11	3	0	0	0	0.51189	1	22229	22229		14.838	2.3067	1	6368900			38959	2805	19123	19205	45201	45201					0.09943807862362064
VLPGAGGT	8	Unmodified	_VLPGAGGT_					0	0	0		ENSG00000188157|ENST00000379370|AGRN;nc|ENSG00000188157|O00468-3|AGRN;nc|ENSG00000188157|O00468-5|AGRN;nc|ENSG00000188157|O00468-4|AGRN;nc|ENSG00000188157|O00468-7|AGRN;nc|ENSG00000188157|O00468|AGRN;AGRN|p.P119Hfs*38|1|0.13|ENSG00000188157|chr1:1022354-1022355|-/A|frameshift_variant	ENSG00000188157|ENST00000379370|AGRN	ENSG00000188157|ENST00000379370|AGRN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	336.1903869509697	2	336.189771	670.36499	-0.73501	-0.0002471	3.5968	0.0012092	2.8618	0.00096211	336.1908692735316	17.775	0.25964	18.754	18.611	18.871	0.97922					17	9	2	0	0	0	0.89176	2	7382	7382;7429		0.79363	0	1	796380			38960	4850	19124	19206	45202;45203	45202					0.016621972261077644
VLPGFYPRGFS	11	Unmodified	_VLPGFYPRGFS_					0	0	0		ENST00000563181.1_1_16:2030938-2031410:-|nuORF;ENST00000354249.8_2_16:2030177-2031410:-|nuORF;ENST00000356120.8_2_16:2030177-2031410:-|nuORF	ENST00000563181.1_1_16:2030938-2031410:-|nuORF	ENST00000563181.1_1_16:2030938-2031410:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.8356811404228	2	620.329673	1238.64479	2.3069	0.001431	0.18611	0.00011545	2.493	0.0015465	620.3282676892775	72.332	0.36604	73.662	73.486	73.852	1.3297					30	11	3	0	0	0	0.90709	1	30377	30377		9.3831	1.473	1	1386700			38961	5974	19125	19207	45204	45204					0.03501693777025139
VLPGHFNTF	9	Unmodified	_VLPGHFNTF_					0	0	0		ENSG00000176055|ENST00000316610|MBLAC2	ENSG00000176055|ENST00000316610|MBLAC2	ENSG00000176055|ENST00000316610|MBLAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.2684814333916	2	516.269084	1030.52362	2.5535	0.0013183	-0.88465	-0.00045672	1.6689	0.00086159	516.2681490017128	40.399	0.52308	41.71	41.577	42.1	1.3102					27	16	2	0	0	0	0.19075	1	16980	16980		34.102	18.255	1	1768900			38962	4393	19126	19208	45205	45205					0.009574911343634085
VLPGKKKKKT	10	Unmodified	_VLPGKKKKKT_					0	0	0		DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant;DHX37|p.T447Rfs*41|1|0.33|ENSG00000150990|chr12:124968602-124968603|-/CTCCAGGAGTCCCTGCCAGCCCCCCACGTACC|frameshift_variant;DHX37|p.I700Afs*3|1|0.04|ENSG00000150990|chr12:124960362-124960372|TCCGGGTGATT/-|frameshift_variant;ENSG00000150990|ENST00000308736|DHX37	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1126.764819324017	1	1126.76704	1125.75976	1.353	0.0015246	-3.4411	-0.0038773	-2.088	-0.0023527	1126.7622251095243	104.27	0.072906	104.27	104.22	104.29	0					19	6	4	0	0	0	0.89803	1	43961	43961		1.4819	0	1	211410000			38963	408	19127	19209	45206	45206					0.20191422978814444
VLPGKKKKKT	10	Unmodified	_VLPGKKKKKT_					0	0	0		DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant;DHX37|p.T447Rfs*41|1|0.33|ENSG00000150990|chr12:124968602-124968603|-/CTCCAGGAGTCCCTGCCAGCCCCCCACGTACC|frameshift_variant;DHX37|p.I700Afs*3|1|0.04|ENSG00000150990|chr12:124960362-124960372|TCCGGGTGATT/-|frameshift_variant;ENSG00000150990|ENST00000308736|DHX37	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	376.2603942751884	3	376.260531	1125.75976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.11	1	104.11	103.61	104.61	0								0	0	0	0.66227	1	43880	43880		0.62683	0	1				38964	408	19127	19209	45207	45207					0.20191422978814444
VLPGKKKKKT	10	Unmodified	_VLPGKKKKKT_					0	0	0		DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant;DHX37|p.T447Rfs*41|1|0.33|ENSG00000150990|chr12:124968602-124968603|-/CTCCAGGAGTCCCTGCCAGCCCCCCACGTACC|frameshift_variant;DHX37|p.I700Afs*3|1|0.04|ENSG00000150990|chr12:124960362-124960372|TCCGGGTGATT/-|frameshift_variant;ENSG00000150990|ENST00000308736|DHX37	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2591125369072	3	376.260531	1125.75976	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.63	1	104.79	104.29	105.29	0.16055								0	0	0	0.66227	1	44371	44371		0.62683	0	1				38965	408	19127	19209	45208	45208					0.20191422978814444
VLPILEEM	8	Unmodified	_VLPILEEM_					0	0	0			REV__nc|ENSG00000079805|P50570-2|DNM2	REV__nc|ENSG00000079805|P50570-2|DNM2	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1769592165947	3	315.177145	942.509605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.27	1	114.44	113.94	114.94	0.17579								0	0	0	1.0178	1	49516	49516		0.40072	0	1		+		38966	14396	19128	19210	45209	45209					0.036050775910666744
VLPILEEM	8	Unmodified	_VLPILEEM_					0	0	0			REV__nc|ENSG00000079805|P50570-2|DNM2	REV__nc|ENSG00000079805|P50570-2|DNM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1776000857353	3	315.177145	942.509605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.44	1	115.59	115.09	116.09	0.14976								0	0	0	1.0178	1	49916	49916		0.40072	0	1		+		38967	14396	19128	19210	45210	45210					0.036050775910666744
VLPILEEM	8	Unmodified	_VLPILEEM_					0	0	0			REV__nc|ENSG00000079805|P50570-2|DNM2	REV__nc|ENSG00000079805|P50570-2|DNM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1780273318291	3	315.177145	942.509605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.57	1	115.72	115.22	116.22	0.14976								0	0	0	1.0178	1	49968	49968		0.40072	0	1		+		38968	14396	19128	19210	45211	45211					0.036050775910666744
VLPILEEM	8	Unmodified	_VLPILEEM_					0	0	0			REV__nc|ENSG00000079805|P50570-2|DNM2	REV__nc|ENSG00000079805|P50570-2|DNM2	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1785156130791	3	315.177145	942.509605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.95	1	116.1	115.6	116.6	0.15228								0	0	0	1.0178	1	50123	50123		0.40072	0	1		+		38969	14396	19128	19210	45212	45212					0.036050775910666744
VLPIPFPSF	9	Unmodified	_VLPIPFPSF_					0	0	0		ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	ENSG00000179820|ENST00000391770|MYADM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.7970764040947	2	508.794404	1015.57425	3.4368	0.0017486	3.5077	0.0017847	6.9445	0.0035333	508.7960952692	96.3	0.15118	96.639	96.545	96.697	0.33875					7	4	2	0	0	0	0.010702	1	40507	40507		106.85	8.0383	1	1273600			38970	4525	19129	19211	45213	45213					0.06709020459379644
VLPISQIRK	9	Unmodified	_VLPISQIRK_					0	0	0			REV__ENST00000596386.1_1_19:40477100-40485896:+|nuORF	REV__ENST00000596386.1_1_19:40477100-40485896:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	351.5358459353447	3	351.897481	1052.67061	1.0635	0.00037425	3.0872	0.0010864	4.1508	0.0014606	351.8985024954758	39.355	0.5116	40.651	40.413	40.924	1.2961					41	16	4	0	0	0	0.11157	1	16474	16474		8.9762	0	1	3360700	+		38971	8540	19130	19212	45214	45214					0.1463858801932929
VLPKDKLI	8	Unmodified	_VLPKDKLI_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MSMS	GG20161007_CRH_Patient100_A02_01	1	309.2065307497978	3	309.207544	924.600803	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.7	1	103.7	103.2	104.2	0								0	0	0	1.0178	1	43594	43594		1.8442	0	1				38972	1093	19131	19213	45215	45215					0.13548709350698118
VLPKFVML	8	Unmodified	_VLPKFVML_					0	0	0			REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.7951537966728	2	473.793349	945.572146	2.1736	0.0010299	-0.28889	-0.00013687	1.8847	0.00089298	473.79322250077485	71	0.60351	71	70.78	71.383	0					29	18	2	0	0	0	0.89008	1	29598	29598		2.5775	0	1	1320700	+		38973	13046	19132	19214	45216	45216					0.09718268449910283
VLPKFVML	8	Unmodified	_VLPKFVML_					0	0	0			REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	REV__ENST00000435236.2_1_X:98974480-98975440:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	473.7941161990166	2	473.793349	945.572146	2.797	0.0013252	0.41412	0.00019621	3.2112	0.0015214	473.7935587113584	69.894	0.53326	71.248	70.957	71.491	1.3536					27	16	2	0	0	0	0.88958	1	29313	29313		2.8892	0	1	1624700	+		38974	13046	19132	19214	45217	45217					0.09718268449910283
VLPKKGWLL	9	Unmodified	_VLPKKGWLL_					0	0	0		ENST00000461838.5_1_13:28014569-28024229:-|nuORF;ENST00000493719.5_1_13:28014569-28024213:-|nuORF;ENST00000381120.7_1_13:28014569-28024670:-|nuORF;ENST00000484342.2_1_13:28014569-28024692:-|nuORF;ENST00000464753.1_1_13:28014569-28024306:-|nuORF	ENST00000461838.5_1_13:28014569-28024229:-|nuORF	ENST00000461838.5_1_13:28014569-28024229:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.9155761599541	2	527.344595	1052.67464	2.3368	0.0012323	-0.68152	-0.0003594	1.6553	0.0008729	527.3443330336374	39.389	0.41943	40.685	40.443	40.863	1.2961					19	13	2	0	0	0	0.11539	1	16462	16462		12.532	0	1	1195500			38975	6231	19133	19215	45218	45218					0.1504067751304774
VLPKKGWLL	9	Unmodified	_VLPKKGWLL_					0	0	0		ENST00000461838.5_1_13:28014569-28024229:-|nuORF;ENST00000493719.5_1_13:28014569-28024213:-|nuORF;ENST00000381120.7_1_13:28014569-28024670:-|nuORF;ENST00000484342.2_1_13:28014569-28024692:-|nuORF;ENST00000464753.1_1_13:28014569-28024306:-|nuORF	ENST00000461838.5_1_13:28014569-28024229:-|nuORF	ENST00000461838.5_1_13:28014569-28024229:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	526.8015624880791	2	527.344595	1052.67464	1.3752	0.00072521	0.13168	6.9441E-05	1.5069	0.00079465	527.3446338202165	38.779	0.38611	40.615	40.398	40.784	1.8366					19	11	2	0	0	0	0.11216	1	16269	16269		16.942	9.0321	1	645480			38976	6231	19133	19215	45219	45219					0.1504067751304774
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2429687380791	3	358.242477	1071.7056	0.97529	0.00034939	0.16716	5.9883E-05	1.1424	0.00040927	358.2426660931337	47.138	0.63835	48.52	48.187	48.825	1.3825					73	19	5	0	0	0	0.059546	6	19727	19642;19689;19727;19766;19805;19850		57.722	15.766	1	163550000			38977	5023	19134	19216	45220;45221;45222;45223;45224;45225	45222					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8611938357353	2	536.860078	1071.7056	2.3385	0.0012554	-0.62563	-0.00033588	1.7129	0.00091957	536.859741388149	47.138	0.60661	48.52	48.219	48.825	1.3825					58	18	4	0	0	0	0.026836	5	19792	19678;19714;19753;19792;19840		92.491	35.339	1	48479000			38978	5023	19134	19216	45226;45227;45228;45229;45230	45229					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2429382205009	3	358.242477	1071.7056	0.98616	0.00035328	1.3352	0.00047833	2.3214	0.00083161	358.24259253346384	47.665	1.22	49.047	48.792	50.012	1.3825					69	38	3	0	0	0	0.066815	3	19951	19902;19951;20004		47.594	21.326	1	4514600			38979	5023	19134	19216	45231;45232;45233	45232					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.8602172732353	2	536.860078	1071.7056	2.3951	0.0012858	-1.3377	-0.00071815	1.0574	0.00056765	536.859408864217	47.602	0.56542	48.984	48.825	49.391	1.3825					38	17	3	0	0	0	0.18337	1	20006	20006		37.974	12.575	1	1175600			38980	5023	19134	19216	45234	45234					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2429382205009	3	358.242477	1071.7056	1.4967	0.00053618	-0.22249	-7.9705E-05	1.2742	0.00045647	358.2424799956619	46.661	0.61286	48.632	48.283	48.896	1.9703					73	19	5	0	0	0	0.045797	6	19611	19444;19489;19535;19574;19611;19653		55.503	15.264	1	108880000			38981	5023	19134	19216	45235;45236;45237;45238;45239;45240	45239					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8610717654228	2	536.860078	1071.7056	2.0586	0.0011052	-0.069692	-3.7415E-05	1.9889	0.0010678	536.8600160922491	46.661	0.58191	48.632	48.347	48.929	1.9703					57	18	4	0	0	0	0.026836	4	19523	19476;19523;19561;19598		92.491	33.813	1	29864000			38982	5023	19134	19216	45241;45242;45243;45244	45242					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	358.2429382205009	3	358.242477	1071.7056	2.0628	0.00073899	0.22291	7.9854E-05	2.2857	0.00081884	358.2420911792935	47.165	0.96594	49.141	48.87	49.836	1.976					69	30	3	0	0	0	0.10294	3	19744	19693;19744;19823		43.772	23.358	1	5814400			38983	5023	19134	19216	45245;45246;45247	45246					0.17261830827260383
VLPKLYVKL	9	Unmodified	_VLPKLYVKL_					0	0	0		ENST00000465478.1_1_8:93156318-93156576:-|nuORF;nc|ENSG00000196933|Q5JNZ5|RPS26P11;ENSG00000197728|ENST00000646449|RPS26;chr12:56043049-56043363|135|553.61|0.95|9.19|+|2|None,RPS26|1;ENST00000444468.1_1_X:128542382-128542532:+|nuORF;ENST00000471178.2_1_19:35024355-35024547:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	ENST00000465478.1_1_8:93156318-93156576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.8614379763603	2	536.860078	1071.7056	2.6184	0.0014057	0.1648	8.8474E-05	2.7832	0.0014942	536.8602407257931	47.133	0.53367	49.109	48.902	49.435	1.976					26	16	2	0	0	0	0.15635	1	19736	19736		37.974	11.09	1	1557700			38984	5023	19134	19216	45248	45248					0.17261830827260383
VLPLKKPPKWI	11	Unmodified	_VLPLKKPPKWI_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	330.4713012576103	4	330.470692	1317.85366	1.1466	0.00037892	1.1736	0.00038782	2.3201	0.00076674	330.4710923486763	45.206	0.59784	47.166	46.799	47.396	1.9596					34	18	4	0	0	0	1.0402	1	18861	18861		0.094841	0	1	1636700			38985	2846	19135	19217	45249	45249					0.20745142081113954
VLPLKKPPKWI	11	Unmodified	_VLPLKKPPKWI_					0	0	0		SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant;nc|ENSG00000138674|O94979-5|SEC31A;ENST00000436790.6_1_4:83784452-83812260:-|nuORF;nc|ENSG00000138674|O94979-6|SEC31A;nc|ENSG00000138674|O94979-3|SEC31A;nc|ENSG00000138674|O94979-10|SEC31A;nc|ENSG00000138674|O94979-4|SEC31A;nc|ENSG00000138674|O94979-9|SEC31A;nc|ENSG00000138674|O94979-2|SEC31A;ENSG00000138674|ENST00000395310|SEC31A;nc|ENSG00000138674|O94979-8|SEC31A;nc|ENSG00000138674|O94979-7|SEC31A	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	SEC31A|p.I462Lfs*16|1|0.44|ENSG00000138674|chr4:82864412-82864412|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	330.4709045290947	4	330.470692	1317.85366	1.9646	0.00064925	0.54692	0.00018074	2.5115	0.00082999	330.72158309013525	47.55	1.1145	49.526	48.999	50.113	1.976					82	35	3	0	0	0	1.0402	1	19930	19930		0.094841	0	1	1578400			38986	2846	19135	19217	45250	45250					0.20745142081113954
VLPLMLPSF	9	Unmodified	_VLPLMLPSF_					0	0	0		ENST00000486301.5_1_3:46712476-46716264:-|nuORF;ENST00000434140.5_2_3:46712476-46717187:-|nuORF;nc|ENSG00000178038|Q60I27-6|ALS2CL;ENST00000383742.7_2_3:46712476-46718839:-|nuORF;nc|ENSG00000178038|Q60I27-3|ALS2CL;nc|ENSG00000178038|Q60I27-2|ALS2CL;ENSG00000178038|ENST00000318962|ALS2CL	ENST00000486301.5_1_3:46712476-46716264:-|nuORF	ENST00000486301.5_1_3:46712476-46716264:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7966186404228	2	508.796089	1015.57763	4.2254	0.0021499	-4.3173	-0.0021966	-0.091902	-4.6759E-05	508.79372542630637	96.429	0.15478	96.713	96.651	96.806	0.28442					7	4	2	0	0	0	0.030843	1	40572	40572		86.121	4.2573	1	1904900			38987	4471	19136	19218	45251	45251					0.07045947241738304
VLPLTGGG	8	Unmodified	_VLPLTGGG_					0	0	0			REV__ENST00000470356.3_1_19:3572943-3574226:+|nuORF	REV__ENST00000470356.3_1_19:3572943-3574226:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	357.2143432497978	2	357.213246	712.41194	1.2573	0.00044912	2.89	0.0010323	4.1472	0.0014814	357.2143831176343	37.828	0.52152	38.133	37.825	38.346	0.30497					77	22	5	0	0	0	0.89198	3	15865	15865;15912;15955		0	0	1	385780000	+		38988	13277	19137	19219	45252;45253;45254	45252					0.04423056777250167
VLPNFLPYNV	10	Unmodified	_VLPNFLPYNV_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	588.3275024294853	2	588.326599	1174.63865	2.2554	0.0013269	-0.78273	-0.0004605	1.4726	0.00086639	588.3270583502771	82.151	0.33092	82.151	81.977	82.308	0					16	10	2	0	0	0	0.32206	1	34235	34235		37.974	18.717	1	626070			38989	3111	19138	19220	45255	45255					0.05831175545495171
VLPNFLPYNV	10	Unmodified	_VLPNFLPYNV_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.3293945193291	2	588.326599	1174.63865	1.9862	0.0011685	0.31677	0.00018636	2.3029	0.0013549	588.3278474155724	81.686	0.30899	81.966	81.812	82.12	0.2802					16	9	2	0	0	0	0.41677	1	34143	34143		32.305	17.467	1	638740			38990	3111	19138	19220	45256	45256					0.05831175545495171
VLPNFLPYNV	10	Unmodified	_VLPNFLPYNV_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3276855349541	2	588.326599	1174.63865	2.8013	0.0016481	-0.47729	-0.0002808	2.324	0.0013673	588.3261693805194	80.765	0.39046	81.998	81.771	82.161	1.2332					24	12	3	0	0	0	0.068389	1	33884	33884		71.134	18.865	1	1747200			38991	3111	19138	19220	45257	45257					0.05831175545495171
VLPNFLPYNV	10	Unmodified	_VLPNFLPYNV_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3254882693291	2	588.326599	1174.63865	1.2634	0.00074332	-1.2118	-0.00071294	0.051637	3.038E-05	588.3255364870599	80.289	0.35309	82.005	81.848	82.201	1.7167					20	11	2	0	0	0	0.11481	1	33678	33678		61.357	15.337	1	1301300			38992	3111	19138	19220	45258	45258					0.05831175545495171
VLPNRPFGLF	10	Unmodified	_VLPNRPFGLF_					0	0	0		ENSG00000005187|ENST00000289416|ACSM3	ENSG00000005187|ENST00000289416|ACSM3	ENSG00000005187|ENST00000289416|ACSM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3356201052666	2	580.334759	1158.65496	0.92169	0.00053489	-0.34486	-0.00020014	0.57682	0.00033475	580.3345823938197	50.936	0.63371	52.33	52.016	52.65	1.3938					69	20	4	0	0	0	0.41677	1	21404	21404		32.305	0	1	102900000			38993	483	19139	19221	45259	45259					0.08198301502261529
VLPPIIALA	9	Unmodified	_VLPPIIALA_					0	0	0			REV__tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	REV__tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	453.2454101443291	2	453.804771	905.59499	3.3264	0.0015095	-1.9008	-0.00086259	1.4256	0.00064695	453.80356473176516	103.28	0.12551	103.33	103.27	103.39	0.059502					7	4	2	0	0	0	0.11957	1	43275	43275		0	0	1	2277600	+		38994	15709	19140	19222	45260	45260					0.13841610839017449
VLPPIIALA	9	Unmodified	_VLPPIIALA_					0	0	0			REV__tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	REV__tr|A0A7D6ZSI3|A0A7D6ZSI3_9CLOTCd(2+)-exportingATPaseOS=ClostridiumintestinaleOX=36845GN=cadAPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	453.804771	905.59499	1.2193	0.00055332	-0.65789	-0.00029855	0.5614	0.00025477	453.80431605693474	103.26	0.16805	103.26	103.17	103.34	0	-0.037195	0.00059455	NaN	0	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2683400	+		38995	15709	19140	19222							0.13841610839017449
VLPPPLAG	8	Unmodified	_VLPPPLAG_					0	0	0		ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;ENST00000556674.1_1_14:76447787-76447877:-|nuORF	ENSG00000111605|ENST00000435070|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	381.5111877322197	2	382.239264	762.463976	-0.079582	-3.0419E-05	0.53253	0.00020355	0.45295	0.00017313	382.2395581027986	18.983	0.21862	20.042	19.913	20.132	1.0585					11	6	2	0	0	0	2.3239	1	7860	7860		0.79363	0	1	551520			38996	1744	19141	19223	45261	45261					0.07324220191003405
VLPPPLAG	8	Unmodified	_VLPPPLAG_					0	0	0		ENSG00000111605|ENST00000435070|CPSF6;nc|ENSG00000111605|Q16630-2|CPSF6;ENST00000556674.1_1_14:76447787-76447877:-|nuORF	ENSG00000111605|ENST00000435070|CPSF6	ENSG00000111605|ENST00000435070|CPSF6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	382.239264	762.463976	0.10257	3.9207E-05	0.60077	0.00022964	0.70334	0.00026884	382.23962068347316	18.526	0.20687	19.974	19.85	20.057	1.448	-0.034066	2.8735E-05	NaN	0.79363	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	658860			38997	1744	19141	19223							0.07324220191003405
VLPPPLLLLL	10	Unmodified	_VLPPPLLLLL_					0	0	0		ENST00000371558.6_1_X:118708567-118708919:+|nuORF	ENST00000371558.6_1_X:118708567-118708919:+|nuORF	ENST00000371558.6_1_X:118708567-118708919:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2528259158134	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.57	1	96.57	96.07	97.07	0								0	0	0	0.66254	1	40367	40367		0.15932	0	1				38998	6127	19142	19224	45262	45262					0.20175288004156755
VLPPVFKLI	9	Unmodified	_VLPPVFKLI_					0	0	0		nc|ENSG00000167608|Q7Z404-1|TMC4;ENSG00000167608|ENST00000619895|TMC4;nc|ENSG00000167608|Q7Z404|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	nc|ENSG00000167608|Q7Z404-1|TMC4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.3430663943291	2	513.341521	1024.66849	2.903	0.0014902	1.0219	0.00052459	3.9249	0.0020148	513.3420485415418	80.219	0.4082	81.47	81.232	81.64	1.2512					28	12	3	0	0	0	0.19075	1	33666	33666		34.102	5.9292	1	1496700			38999	3979	19143	19225	45263	45263					0.15714159281515094
VLPQRFPQF	9	Unmodified	_VLPQRFPQF_					0	0	0		nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3199340701103	2	566.319109	1130.62366	1.9144	0.0010842	0.070782	4.0085E-05	1.9852	0.0011243	566.3192001829449	49.328	0.43291	50.719	50.485	50.918	1.3911					33	13	3	0	0	0	0.083604	2	20653	20603;20653		54.774	24.549	1	2432300			39000	1008	19144	19226	45264;45265	45265					0.06357728468174173
VLPQRFPQF	9	Unmodified	_VLPQRFPQF_					0	0	0		nc|ENSG00000080802|O95628-3|CNOT4;nc|ENSG00000080802|O95628-2|CNOT4;nc|ENSG00000080802|O95628|CNOT4;nc|ENSG00000080802|O95628-8|CNOT4;nc|ENSG00000080802|O95628-4|CNOT4;nc|ENSG00000080802|O95628-7|CNOT4;nc|ENSG00000080802|O95628-9|CNOT4;ENSG00000080802|ENST00000541284|CNOT4;nc|ENSG00000080802|O95628-6|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	nc|ENSG00000080802|O95628-3|CNOT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3198730349541	2	566.319109	1130.62366	1.9229	0.001089	-0.30496	-0.00017271	1.6179	0.00091624	566.3188707409879	48.754	0.4032	50.731	50.514	50.917	1.9772					28	12	3	0	0	0	0.059546	2	20436	20385;20436		64.236	34.012	1	2355500			39001	1008	19144	19226	45266;45267	45267					0.06357728468174173
VLPQSKIQC	9	Unmodified	_VLPQSKIQC_					0	0	0			REV__nc|ENSG00000138802|O95487-2|SEC24B	REV__nc|ENSG00000138802|O95487-2|SEC24B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2828246951103	2	508.283877	1014.5532	4.0194	0.002043	-3.9653	-0.0020155	0.054028	2.7462E-05	508.2813740804586	97.708	0.088409	97.936	97.892	97.981	0.22776					4	2	2	0	0	0	0.46905	1	41126	41126		16.942	2.104	1	8626600	+		39002	10086	19145	19227	45268	45268					0.04650687088212635
VLPQVQHPKN	10	Unmodified	_VLPQVQHPKN_					0	0	0		nc|ENSG00000273345|Q8IVW4-2|CDKL3;ENST00000520515.5_1_5:133541561-133657575:-|nuORF;ENSG00000006837|ENST00000265334|CDKL3;CDKL3-PPP2CA|1|fusion	nc|ENSG00000273345|Q8IVW4-2|CDKL3	nc|ENSG00000273345|Q8IVW4-2|CDKL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3354369997978	2	580.332747	1158.65094	0.92169	0.00053489	3.121	0.0018112	4.0427	0.0023461	580.3345823938197	50.936	0.63371	52.33	52.016	52.65	1.3938					69	20	4	0	0	0	0.41677	1	21365	21365		32.305	4.6767	1	102900000			39003	144	19146	19228	45269	45269					0.07796212008565817
VLPQVQHPKN	10	Unmodified	_VLPQVQHPKN_					0	0	0		nc|ENSG00000273345|Q8IVW4-2|CDKL3;ENST00000520515.5_1_5:133541561-133657575:-|nuORF;ENSG00000006837|ENST00000265334|CDKL3;CDKL3-PPP2CA|1|fusion	nc|ENSG00000273345|Q8IVW4-2|CDKL3	nc|ENSG00000273345|Q8IVW4-2|CDKL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3348876833916	2	580.332747	1158.65094	1.1588	0.0006725	2.4185	0.0014035	3.5773	0.002076	580.3341740745587	50.351	0.75101	52.328	52.039	52.79	1.977					71	24	4	0	0	0	0.41677	1	21145	21145		32.305	4.6767	1	88446000			39004	144	19146	19228	45270	45270					0.07796212008565817
VLPRTQVCL	9	Unmodified	_VLPRTQVCL_					0	0	0		ENST00000467201.5_1_7:100176020-100176179:-|nuORF	ENST00000467201.5_1_7:100176020-100176179:-|nuORF	ENST00000467201.5_1_7:100176020-100176179:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5344726443291	3	343.535555	1027.58484	0.44264	0.00015206	-1.9097	-0.00065604	-1.467	-0.00050397	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.70577	1	10853	10853		7.1017	0.37856	1	4123700			39005	6709	19147	19229	45271	45271					0.07214679842149962
VLPRVLTA	8	Unmodified	_VLPRVLTA_					0	0	0		ENST00000459739.5_1_10:79553706-79569486:-|nuORF	ENST00000459739.5_1_10:79553706-79569486:-|nuORF	ENST00000459739.5_1_10:79553706-79569486:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2836486697197	2	434.78437	867.554188	3.3148	0.0014412	-4.0873	-0.0017771	-0.77254	-0.00033589	434.7849991964917	109.34	0.40385	109.5	109.25	109.65	0.15898					29	18	2	0	0	0	0.89178	1	47480	47480		0.69038	0	1	45301000			39006	6660	19148	19230	45272	45272					0.11511269519394318
VLPRVLTA	8	Unmodified	_VLPRVLTA_					0	0	0		ENST00000459739.5_1_10:79553706-79569486:-|nuORF	ENST00000459739.5_1_10:79553706-79569486:-|nuORF	ENST00000459739.5_1_10:79553706-79569486:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	434.78437	867.554188	3.3152	0.0014414	-4.9273	-0.0021423	-1.6121	-0.00070091	434.7851121255742	109.32	0.2849	109.47	109.34	109.63	0.1548	-0.011808	-0.00032238	NaN	0.69038	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	38954000			39007	6660	19148	19230							0.11511269519394318
VLPSVLNKF	9	Unmodified	_VLPSVLNKF_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.8120605349541	2	508.810585	1015.60662	1.1201	0.0005699	1.4201	0.00072255	2.5401	0.0012925	508.81151892073825	52.958	0.3861	54.359	54.152	54.538	1.4005					29	11	3	0	0	0	0.029093	2	22173	22126;22173		88.904	46.809	1	6368900			39008	5025	19149	19231	45273;45274	45274					0.09943807862373433
VLPSVLNKF	9	Unmodified	_VLPSVLNKF_					0	0	0		nc|ENSG00000197771|Q9BTE3-3|MCMBP;ENSG00000197771|ENST00000369077|MCMBP;nc|ENSG00000197771|Q9BTE3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	nc|ENSG00000197771|Q9BTE3-3|MCMBP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.8121520876884	2	508.810585	1015.60662	1.4515	0.00073852	0.11226	5.7118E-05	1.5637	0.00079564	508.81091634145736	52.325	0.37672	54.297	54.168	54.545	1.9722					27	11	3	0	0	0	0.01454	2	21960	21910;21960		103.75	61.654	1	4553600			39009	5025	19149	19231	45275;45276	45276					0.09943807862373433
VLPTVFFVP	9	Unmodified	_VLPTVFFVP_					0	0	0			REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	REV__ABCC3|p.P450Rfs*37|1|0.21|ENSG00000108846|chr17:50665160-50665179|GTCCCTCTGTCCTGGCTGGA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.8053466677666	2	509.802229	1017.5899	1.8267	0.00093127	1.3432	0.00068475	3.1699	0.001616	509.80256647450057	68.992	1.3504	68.992	68.642	69.993	0					76	42	2	0	0	0	0.64949	1	28871	28871		9.3474	4.1168	1	1769100	+		39010	8072	19150	19232	45277	45277					0.08181306976428004
VLQAKKNEEL	10	Unmodified	_VLQAKKNEEL_					0	0	0			REV__ENST00000541658.2_1_14:35704472-35704841:-|nuORF	REV__ENST00000541658.2_1_14:35704472-35704841:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2847167849541	3	391.227556	1170.66084	1.1042	0.00043199	1.087	0.00042526	2.1912	0.00085725	391.22870426544125	48.05	0.80902	49.438	49.116	49.925	1.388					34	25	2	0	0	0	0.12555	1	20317	20317		2.086	0.89267	1	872860	+		39011	13784	19151	19233	45278	45278					0.08233355223273975
VLQDIQVML	9	Unmodified	_VLQDIQVML_					0	0	0		MCM5-LYN|1|fusion;ENSG00000100297|ENST00000216122|MCM5	MCM5-LYN|1|fusion	MCM5-LYN|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	529.8014404177666	2	529.79936	1057.58417	1.9302	0.0010226	-0.91832	-0.00048652	1.0119	0.00053608	529.800073347671	71.953	0.28684	72.278	72.133	72.42	0.32494					18	8	3	0	0	0	0.25667	1	30119	30119		27.629	12.791	1	940130			39012	1260	19152	19234	45279	45279					0.057678404024500196
VLQDIQVML	9	Unmodified	_VLQDIQVML_					0	0	0		MCM5-LYN|1|fusion;ENSG00000100297|ENST00000216122|MCM5	MCM5-LYN|1|fusion	MCM5-LYN|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8015624880791	2	529.79936	1057.58417	2.9756	0.0015765	-0.98878	-0.00052386	1.9869	0.0010526	529.7998010448522	70.853	0.43936	72.206	71.906	72.345	1.3536					19	13	2	0	0	0	0.029093	1	29737	29737		88.904	7.0134	1	5339900			39013	1260	19152	19234	45280	45280					0.057678404024500196
VLQEEEEED	9	Unmodified	_VLQEEEEED_					0	0	0			REV__ENSG00000155115|ENST00000329970|GTF3C6	REV__ENSG00000155115|ENST00000329970|GTF3C6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	559.8110229372978	2	560.238041	1118.46153	2.41	0.0013502	-0.27607	-0.00015466	2.134	0.0011955	560.2381849783733	69.621	0.3112	70.987	70.817	71.128	1.3657					14	9	2	0	0	0	0.071872	1	29281	29281		37.974	9.4872	1	808210	+		39014	10489	19153	19235	45281	45281					-0.09296369585945286
VLQEEEEED	9	Unmodified	_VLQEEEEED_					0	0	0			REV__ENSG00000155115|ENST00000329970|GTF3C6	REV__ENSG00000155115|ENST00000329970|GTF3C6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	560.238041	1118.46153	1.265	0.00070871	-0.69787	-0.00039097	0.56714	0.00031773	560.2377505744848	69.073	0.30586	70.926	70.766	71.072	1.853	-0.030393	-0.00028977	NaN	37.974	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	520210	+		39015	10489	19153	19235							-0.09296369585945286
VLQKIKYAFSL	11	Unmodified	_VLQKIKYAFSL_					0	0	0		ENST00000592284.5_1_19:55593146-55593922:+|nuORF;nc|ENSG00000131037|Q8TE68-4|EPS8L1;ENST00000589362.5_1_19:55593317-55598979:+|nuORF;nc|ENSG00000131037|Q8TE68-3|EPS8L1;nc|ENSG00000131037|Q8TE68-2|EPS8L1;ENSG00000131037|ENST00000201647|EPS8L1	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	ENST00000592284.5_1_19:55593146-55593922:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	437.2683593630791	3	437.267463	1308.78056	2.526	0.0011045	-0.70684	-0.00030908	1.8191	0.00079545	437.26696550150893	39.882	0.49797	41.192	40.802	41.3	1.3102					21	16	2	0	0	0	0.98455	1	16736	16736		4.7159	1.8726	1	2027800			39016	2477	19154	19236	45282	45282					0.1385196856786024
VLQMTWML	8	Unmodified	_VLQMTWML_					0	0	0		ENST00000471475.1_1_10:70666494-70666578:+|nuORF	ENST00000471475.1_1_10:70666494-70666578:+|nuORF	ENST00000471475.1_1_10:70666494-70666578:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2631713747978	2	511.264099	1020.51364	2.8818	0.0014734	-1.7704	-0.00090517	1.1114	0.00056821	511.26286132594004	77.05	0.6629	78.331	77.844	78.507	1.2809					35	20	3	0	0	0	0.87655	1	32300	32300		11.114	0	1	1456000			39017	6743	19155	19237	45283	45283					0.004208438131172443
VLQPPKLFHL	10	Unmodified	_VLQPPKLFHL_					0	0	0		ENST00000437864.1_1_9:100396806-100398280:-|nuORF	ENST00000437864.1_1_9:100396806-100398280:-|nuORF	ENST00000437864.1_1_9:100396806-100398280:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.3702880740166	2	596.366059	1190.71756	2.6961	0.0016079	0.89534	0.00053395	3.5915	0.0021418	596.3681475052388	85.491	0.67768	86.617	86.329	87.006	1.1265					60	27	4	0	0	0	0.89803	1	35848	35848		1.6526	0	1	4015200			39018	6540	19156	19238	45284	45284					0.12983447570468343
VLQQIVNLI	9	Unmodified	_VLQQIVNLI_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.3310424685478	2	520.329142	1038.64373	2.8612	0.0014888	0.60745	0.00031608	3.4686	0.0018048	520.3297721718557	78.629	0.65114	79.895	79.602	80.253	1.2668					35	20	3	0	0	0	0.070055	2	33037	32992;33037		77.984	27.129	1	2922400			39019	2432	19157	19239	45285;45286	45286					0.12595479408128085
VLQQIVNLI	9	Unmodified	_VLQQIVNLI_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.3303710818291	2	520.329142	1038.64373	1.9381	0.0010085	1.0653	0.00055432	3.0035	0.0015628	520.3299943473617	78.144	0.46539	79.896	79.684	80.15	1.7514					31	14	3	0	0	0	0.093059	2	32769	32769;32821		67.344	27.387	1	2116000			39020	2432	19157	19239	45287;45288	45287					0.12595479408128085
VLQQLTEI	8	Unmodified	_VLQQLTEI_					0	0	0			REV__ENSG00000136859|ENST00000373425|ANGPTL2	REV__ENSG00000136859|ENST00000373425|ANGPTL2	MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2769042849541	2	472.276575	942.538597	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.239	1	78.991	78.491	79.491	1.7514								0	0	0	1.0178	1	32392	32392		2.8892	0	1		+		39021	9996	19158	19240	45289	45289					0.06502938211690434
VLQRRKRILYR	11	Unmodified	_VLQRRKRILYR_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.9926025271416	3	500.991438	1499.95248	3.2156	0.001611	0.44667	0.00022378	3.6623	0.0018348	500.9908670344091	105.76	0.14832	105.91	105.83	105.98	0.15859					23	7	4	0	0	0	1.0405	1	45111	45111		0	0	1	54780000	+		39022	12896	19159	19241	45290	45290					0.2225055809872174
VLQRRKRILYR	11	Unmodified	_VLQRRKRILYR_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	500.991438	1499.95248	1.1468	0.00057453	3.3466	0.0016766	4.4934	0.0022511	500.9914519691198	105.82	0.097664	105.82	105.76	105.86	0	-0.061244	0.0045267	NaN	0	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9343000	+		39023	12896	19159	19241							0.2225055809872174
VLQRRKRILYR	11	Unmodified	_VLQRRKRILYR_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	500.991438	1499.95248	3.2156	0.001611	0.44667	0.00022378	3.6623	0.0018348	500.9908670344091	105.76	0.14832	105.91	105.83	105.98	0.15859	0.03695	0.00016822	NaN	0	23	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54780000	+		39024	12896	19159	19241							0.2225055809872174
VLQRRKRILYR	11	Unmodified	_VLQRRKRILYR_					0	0	0			REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	REV__ENST00000405334.5_1_2:37368822-37374021:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	500.991438	1499.95248	2.9953	0.0015006	-0.275	-0.00013777	2.7203	0.0013628	500.9904588416588	105.73	0.14992	105.9	105.82	105.97	0.16679	0.024294	-0.00091643	NaN	0	22	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39616000	+		39025	12896	19159	19241							0.2225055809872174
VLQRWRQPRA	10	Unmodified	_VLQRWRQPRA_					0	0	0		ENST00000431558.1_1_3:9989113-9989800:+|nuORF	ENST00000431558.1_1_3:9989113-9989800:+|nuORF	ENST00000431558.1_1_3:9989113-9989800:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	437.2589599490166	3	437.258184	1308.75272	3.2932	0.00144	-2.0759	-0.00090772	1.2173	0.00053228	437.25701668159905	82.488	1.2799	84.158	83.295	84.574	1.67					72	40	2	0	0	0	0.89803	1	34612	34612		0.69767	0	1	2777200			39026	6505	19160	19242	45291	45291					0.11069503150952187
VLQSNQYFV	9	Unmodified	_VLQSNQYFV_					0	0	0			REV__ENSG00000197608|ENST00000594440|ZNF841	REV__ENSG00000197608|ENST00000594440|ZNF841	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	549.3376342654228	2	549.284931	1096.55531	0.40166	0.00022063	-1.9338	-0.0010622	-1.5321	-0.00084158	549.2830359283367	56.295	0.356	57.705	57.579	57.935	1.4099					15	11	2	0	0	0	0.11463	1	23574	23574		4.3292	0.38484	1	1568200	+		39027	11683	19161	19243	45292	45292					0.010894390976545765
VLQYVVPEV	9	Unmodified	_VLQYVVPEV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3003417849541	2	523.30005	1044.58555	2.247	0.0011758	0.020061	1.0498E-05	2.267	0.0011863	523.3002304659761	63.404	0.31553	63.404	63.24	63.556	0					14	9	2	0	0	0	0.3091	1	26417	26417		34.102	9.4286	1	687430			39028	1602	19162	19244	45293	45293					0.06503797762843533
VLQYVVPEV	9	Unmodified	_VLQYVVPEV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3017455935478	2	523.30005	1044.58555	2.0635	0.0010798	0.048737	2.5504E-05	2.1122	0.0011053	523.3002373139922	62.983	0.34457	63.312	63.067	63.412	0.32974					16	10	2	0	0	0	0.40005	2	26353	26353;26407		28.487	14.979	1	534380			39029	1602	19162	19244	45294;45295	45294					0.06503797762843533
VLQYVVPEV	9	Unmodified	_VLQYVVPEV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3010131716728	2	523.30005	1044.58555	3.0184	0.0015795	0.64242	0.00033618	3.6609	0.0019157	523.2996833664138	61.742	0.43852	63.16	62.927	63.365	1.4177					37	13	4	0	0	0	0.099302	2	25889	25889;25941		64.236	30.134	1	4624500			39030	1602	19162	19244	45296;45297	45296					0.06503797762843533
VLQYVVPEV	9	Unmodified	_VLQYVVPEV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.590991199017	1	1045.59282	1044.58555	2.7436	0.0028687	-1.8261	-0.0019094	0.91746	0.00095929	1045.5910357572932	61.805	0.31383	63.222	63.02	63.333	1.4177					17	9	2	0	0	0	0.44062	1	25930	25930		25.399	1.3787	1	800520			39031	1602	19162	19244	45298	45298					0.06503797762843533
VLQYVVPEV	9	Unmodified	_VLQYVVPEV_					0	0	0		ENSG00000107581|ENST00000369144|EIF3A;nc|ENSG00000107581|Q14152-2|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	ENSG00000107581|ENST00000369144|EIF3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3018066287041	2	523.30005	1044.58555	2.2157	0.0011595	0.62554	0.00032735	2.8412	0.0014868	523.3003358657364	61.245	0.62923	63.208	63.002	63.631	1.9631					40	19	3	0	0	0	0.099302	2	25701	25701;25743		64.236	22.657	1	4313200			39032	1602	19162	19244	45299;45300	45299					0.06503797762843533
VLRAIAPLR	9	Unmodified	_VLRAIAPLR_					0	0	0			REV__ENST00000438259.6_1_3:42544112-42573011:+|nuORF	REV__ENST00000438259.6_1_3:42544112-42573011:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.8949767947197	3	336.894071	1007.66038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.2	1	119.36	118.86	119.86	0.16237								0	0	0	0.42693	1	51438	51438		0.26902	0	1		+		39033	13066	19163	19245	45301	45301					0.15686025084721678
VLRAPAAL	8	Unmodified	_VLRAPAAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;ENST00000561090.5_1_14:24657607-24657993:-|nuORF;ENST00000558193.5_1_14:24657452-24657993:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	810.5204955935478	1	810.519599	809.512323	1.2673	0.0010272	-0.10561	-8.5603E-05	1.1617	0.00094159	810.5196629642937	107.78	0.4239	107.78	107.55	107.97	0					53	22	3	0	0	0	0.89198	1	46282	46282		0	0	1	63284000			39034	4941	19164	19246	45302	45302					0.09994713830872115
VLRAPAAL	8	Unmodified	_VLRAPAAL_					0	0	0		ENSG00000196497|ENST00000354464|IPO4;nc|ENSG00000196497|Q8TEX9-2|IPO4;IPO4|p.V778Sfs*9|1|0.14|ENSG00000196497|chr14:24183063-24183066|CACC/-|frameshift_variant;ENST00000561199.5_1_14:24652794-24657993:-|nuORF;ENST00000560315.5_1_14:24657420-24657993:-|nuORF;ENST00000561090.5_1_14:24657607-24657993:-|nuORF;ENST00000558193.5_1_14:24657452-24657993:-|nuORF	ENSG00000196497|ENST00000354464|IPO4	ENSG00000196497|ENST00000354464|IPO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	810.5210449099541	1	810.519599	809.512323	2.7614	0.0022382	-2.2486	-0.0018225	0.51282	0.00041565	810.5184910319233	107.76	0.40652	107.82	107.68	108.08	0.052452					49	21	3	0	0	0	0.89198	1	46196	46196		0	0	1	41238000			39035	4941	19164	19246	45303	45303					0.09994713830872115
VLRDLQLRKER	11	Unmodified	_VLRDLQLRKER_					0	0	0			REV__sp|Q6SW55|UL87_HCMVMUncharacterizedproteinUL87OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL87PE=3SV=1	REV__sp|Q6SW55|UL87_HCMVMUncharacterizedproteinUL87OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL87PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	475.9612914919853	3	475.959803	1424.85758	2.3902	0.0011377	0.52053	0.00024775	2.9108	0.0013854	475.9602637532336	53.212	2.1881	53.212	52.821	55.009	0					239	72	6	0	0	0	0.94496	1	22202	22202		3.5927	0	1	350990000	+		39036	14653	19165	19247	45304	45304					0.1621457983687833
VLRDLQLRKER	11	Unmodified	_VLRDLQLRKER_					0	0	0			REV__sp|Q6SW55|UL87_HCMVMUncharacterizedproteinUL87OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL87PE=3SV=1	REV__sp|Q6SW55|UL87_HCMVMUncharacterizedproteinUL87OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL87PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	475.9630309939384	3	475.959803	1424.85758	0.49385	0.00023505	2.9906	0.0014234	3.4844	0.0016584	475.96273407866005	50.646	2.1044	52.621	52.219	54.323	1.9753					251	72	7	0	0	0	0.98155	1	21313	21313		2.2527	0	1	734820000	+		39037	14653	19165	19247	45305	45305					0.1621457983687833
VLREYLVFKI	10	Unmodified	_VLREYLVFKI_					0	0	0		ENSG00000186094|ENST00000371839|AGBL4;nc|ENSG00000186094|Q5VU57-2|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	320.7013122439384	4	320.699775	1278.76999	1.0696	0.00034303	1.764	0.00056572	2.8336	0.00090875	320.70104643956364	40.187	2.0248	41.498	41.086	43.111	1.3102					188	64	6	0	0	0	0.8872	1	16921	16921		2.8433	0.4085	1	367210000			39038	4778	19166	19248	45306	45306					0.14175985913402656
VLRFPRIVH	9	Unmodified	_VLRFPRIVH_					0	0	0		ENSG00000100147|ENST00000255784|CCDC134	ENSG00000100147|ENST00000255784|CCDC134	ENSG00000100147|ENST00000255784|CCDC134	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	380.2298156619072	3	379.573221	1135.69783	4.4041	0.0016717	3.9431	0.0014967	8.3472	0.0031684	379.57467257775494	87.725	0.44496	89.221	88.983	89.428	1.4953					18	13	2	0	0	0	0.11938	1	36898	36898		1.1933	0.92432	1	562100			39039	1247	19167	19249	45307	45307					0.13541116350347693
VLRGGRTQ	8	Unmodified	_VLRGGRTQ_					0	0	0		LAMA5-C20orf151|1|fusion;ENSG00000130702|ENST00000252999|LAMA5	LAMA5-C20orf151|1|fusion	LAMA5-C20orf151|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7657958865166	2	443.764501	885.514448	3.7334	0.0016568	-1.1971	-0.00053122	2.5363	0.0011255	443.7638447199824	73.84	0.81561	75.158	74.654	75.469	1.318					52	25	3	0	0	0	0.89178	1	31008	31008		0.69038	0	1	8790900			39040	7781	19168	19250	45308	45308					0.0671114256869032
VLRGRPGA	8	Unmodified	_VLRGRPGA_					0	0	0		ENSG00000165355|ENST00000298097|FBXO33;chr17:50196341-50196617|128|18.14|0.0|20.79|-|1|None,COL1A1|1	ENSG00000165355|ENST00000298097|FBXO33	ENSG00000165355|ENST00000298097|FBXO33	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2561828494072	2	413.256311	824.49807	2.2414	0.00092626	-0.86541	-0.00035764	1.3759	0.00056862	413.2557835853606	81.253	0.42446	81.543	81.276	81.701	0.29055					27	13	3	0	0	0	0.89178	1	33912	33912		0.69038	0	1	3976300			39041	3832	19169	19251	45309	45309					0.07880061402602223
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2756835818291	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.043	1	84.043	83.543	84.543	0								0	0	0	0.42693	1	35022	35022		0.20686	0.047535	1		+		39042	11230	19170	19252	45310	45310					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_01	1	398.2759277224541	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.002	1	85.002	84.502	85.502	0								0	0	0	0.42693	1	35419	35419		0.23584	0.095952	1		+		39043	11230	19170	19252	45311	45311					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2761108279228	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.351	1	83.621	83.121	84.121	0.27029								0	0	0	0.42693	1	34859	34859		0.23584	0.076522	1		+		39044	11230	19170	19252	45312	45312					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2756835818291	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.653	1	83.924	83.424	84.424	0.27029								0	0	0	0.42693	1	34986	34986		0.23584	0.141	1		+		39045	11230	19170	19252	45313	45313					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2764160037041	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.026	1	84.287	83.787	84.787	0.26083								0	0	0	0.42693	1	35145	35145		0.23584	0.095952	1		+		39046	11230	19170	19252	45314	45314					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_A02_02	2	398.2762634158134	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.287	1	84.547	84.047	85.047	0.26083								0	0	0	0.42693	1	35252	35252		0.23584	0.095952	1		+		39047	11230	19170	19252	45315	45315					0.2157987191567372
VLRKKKHKR	9	Unmodified	_VLRKKKHKR_					0	0	0			REV__ENSG00000177954|ENST00000651669|RPS27	REV__ENSG00000177954|ENST00000651669|RPS27	MSMS	GG20161007_CRH_Patient100_W632_02	4	398.2766296267509	3	398.275286	1191.80403	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.073	1	83.743	83.243	84.243	1.67								0	0	0	0.42693	1	34431	34431		0	0	1		+		39048	11230	19170	19252	45316	45316					0.2157987191567372
VLRKKKKKV	9	Unmodified	_VLRKKKKKV_					0	0	0		NIFK|p.T238Kfs*17|1|0.04|ENSG00000155438|chr2:121727893-121727894|-/GTCTT|frameshift_variant;NIFK|p.T238Sfs*23|1|0.04|ENSG00000155438|chr2:121727895-121727896|-/ATTGCTGGCGACAGAAAAGGCTG|frameshift_variant;ENSG00000155438|ENST00000285814|NIFK	NIFK|p.T238Kfs*17|1|0.04|ENSG00000155438|chr2:121727893-121727894|-/GTCTT|frameshift_variant	NIFK|p.T238Kfs*17|1|0.04|ENSG00000155438|chr2:121727893-121727894|-/GTCTT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.9100219607353	2	563.910968	1125.80738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1227	1	3.2453	2.7453	3.7453	0.12256								0	0	0	0.42693	1	1289	1289		0	0	1				39049	3421	19171	19253	45317	45317					0.24951121969661472
VLRKRPGGV	9	Unmodified	_VLRKRPGGV_					0	0	0			REV__nc|ENSG00000135454|Q00973-3|B4GALNT1	REV__nc|ENSG00000135454|Q00973-3|B4GALNT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3203918337822	2	491.319443	980.624333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.52	1	98.776	98.276	99.276	0.25636								0	0	0	0.42693	1	41463	41463		2.0598	1.2661	1		+		39050	14441	19172	19254	45318	45318					0.133245679078982
VLRLLIDL	8	Unmodified	_VLRLLIDL_					0	0	0			REV__ENST00000294728.6_1_1:101185471-101186103:+|nuORF	REV__ENST00000294728.6_1_1:101185471-101186103:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	318.1919738650322	3	318.883061	953.627353	-2.5877	-0.00082517	-3.7002	-0.0011799	-6.2879	-0.0020051	318.8820766026369	32.32	0.33859	32.32	32.072	32.411	0					19	10	2	0	0	0	2.3239	1	13555	13555		0	0	1	310500	+		39051	12287	19173	19255	45319	45319					0.14868398242026615
VLRLQPLR	8	Unmodified	_VLRLQPLR_					0	0	0		ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	ENST00000557925.1_1_19:8315741-8320784:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.8302490115166	2	497.829643	993.644734	1.3885	0.00069123	-0.79455	-0.00039555	0.59393	0.00029568	497.8290907491155	23.463	0.27758	23.696	23.536	23.814	0.23306					13	8	2	0	0	0	0.88504	1	9770	9770		5.7604	0	1	521670			39052	7311	19174	19256	45320	45320					0.14765738567678
VLRPSKRGLW	10	Unmodified	_VLRPSKRGLW_					0	0	0			REV__nc|ENSG00000177731|Q13045-2|FLII	REV__nc|ENSG00000177731|Q13045-2|FLII	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3714477419853	2	606.372207	1210.72986	2.5372	0.0015385	-2.589	-0.0015699	-0.051757	-3.1384E-05	606.370635971915	76.828	0.85344	78.122	77.983	78.836	1.2938					41	26	2	0	0	0	0.87343	2	32257	32209;32257		4.3292	0.38484	1	2266000	+		39053	11226	19175	19257	45321;45322	45322					0.13292484033490837
VLRRGWLL	8	Unmodified	_VLRRGWLL_					0	0	0			REV__ENST00000496925.5_1_3:184024263-184025148:+|nuORF	REV__ENST00000496925.5_1_3:184024263-184025148:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	507.2696105837822	2	506.824361	1011.63417	1.9385	0.00098245	-2.5952	-0.0013153	-0.65679	-0.00033288	506.8229910512699	54.679	0.25069	56.084	55.931	56.182	1.4048					11	7	2	0	0	0	2.3239	1	22874	22874		26.341	0	1	1403500	+		39054	13473	19176	19258	45323	45323					0.12881755913281268
VLRRLLRQRL	10	Unmodified	_VLRRLLRQRL_					0	0	0		ENST00000391858.8_1_1:231473224-231473434:+|nuORF	ENST00000391858.8_1_1:231473224-231473434:+|nuORF	ENST00000391858.8_1_1:231473224-231473434:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.9457885622978	2	661.946405	1321.87826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.939	1	46.304	45.804	46.804	1.3653								0	0	0	0.66237	1	18835	18835		0.45834	0	1				39055	6251	19177	19259	45324	45324					0.23019215007184357
VLRRLRRIFHP	11	Unmodified	_VLRRLRRIFHP_					0	0	0		ENST00000264071.6_1_19:6501614-6502320:-|nuORF	ENST00000264071.6_1_19:6501614-6502320:-|nuORF	ENST00000264071.6_1_19:6501614-6502320:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	731.4650146365166	2	731.965129	1461.9157	1.5765	0.0011539	0.33526	0.0002454	1.9118	0.0013993	731.9663244537991	97.674	0.12174	97.674	97.599	97.721	0					5	3	2	0	0	0	0.14606	1	40840	40840		0	0	1	4294300			39056	5647	19178	19260	45325	45325					0.2032230627280569
VLRRMYILLIW	11	Unmodified	_VLRRMYILLIW_					0	0	0		L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|208|2|anti-sense;L1PA2_dup23|chr1:43114528-43120516:-|1.3533449411662286|0.3152228216366226|2.1|404.0|205|1|anti-sense;L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|169|3|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|208|2|anti-sense	L1PA5_dup81|chr1:46846138-46850891:+|1.1527782471472834|0.4206475147995111|1.45|420.0|208|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	492.6363708376884	3	492.635492	1474.88465	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.104	1	89.551	89.051	90.051	1.4467								0	0	0	0.63775	1	37135	37135		0.094841	0.011491	1				39057	7723	19179	19261	45326	45326					0.16619972123726257
VLRRQHSKL	9	Unmodified	_VLRRQHSKL_					0	0	0		nc|ENSG00000214021|Q9Y4R7-5|TTLL3;nc|ENSG00000214021|Q9Y4R7|TTLL3;ENSG00000214021|ENST00000685419|TTLL3	nc|ENSG00000214021|Q9Y4R7-5|TTLL3	nc|ENSG00000214021|Q9Y4R7-5|TTLL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	380.2295410037041	3	379.57188	1135.69381	3.836	0.001456	0.7371	0.00027978	4.5731	0.0017358	379.5721175213272	87.504	0.74989	88.596	88.366	89.116	1.0918					46	23	2	0	0	0	0.11954	1	37016	37016		0.26902	0	1	9859200			39058	5235	19180	19262	45327	45327					0.1313902685665198
VLRRRPER	8	Unmodified	_VLRRRPER_					0	0	0		chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3394653201103	2	541.338698	1080.66284	2.0005	0.0010829	-0.54372	-0.00029433	1.4568	0.0007886	541.33828660629	80.926	1.1083	81.217	80.655	81.763	0.29056					79	35	3	0	0	0	0.89008	2	33921	33870;33921		2.5775	0	1	2735700			39059	196	19181	19263	45328;45329	45329					0.12573873542419278
VLRRRPER	8	Unmodified	_VLRRRPER_					0	0	0		chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	chr13:114282127-114291634|126|16.91|0.7|4.6|+|0|UPF3A,UPF3A|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	541.338698	1080.66284	1.5459	0.00083684	0.46221	0.00025021	2.0081	0.001087	541.3387629499101	79.552	0.5854	81.268	81.046	81.631	1.7167	0.109	0.00088887	NaN	2.5775	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807860			39060	196	19181	19263							0.12573873542419278
VLRRWVEI	8	Unmodified	_VLRRWVEI_					0	0	0			REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	REV__RNF213|p.I3463Tfs*74|1|0.13|ENSG00000173821|chr17:80353024-80353024|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1650878787041	2	535.827101	1069.63965	4.2622	0.0022838	-0.8309	-0.00044522	3.4313	0.0018386	535.8258980896389	91.347	0.44113	92.329	92.071	92.512	0.98157					28	13	4	0	0	0	2.3239	1	38395	38395		2.8892	0	1	1273300	+		39061	11110	19182	19264	45330	45330					0.10761434705068496
VLRVISKKC	9	Unmodified	_VLRVISKKC_					0	0	0			REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	REV__GTF3C1|p.H1425Rfs*3|1|0.29|ENSG00000077235|chr16:27476515-27476530|TGAAGCACCAGAAAGT/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	349.2250549197197	3	349.2232	1044.64777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.549	1	54.95	54.45	55.45	1.4005								0	0	0	0.42693	1	22411	22411		0.96228	0.50394	1		+		39062	8778	19183	19265	45331	45331					0.1272324563019538
VLRVITTV	8	Unmodified	_VLRVITTV_					0	0	0		nc|ENSG00000160753|Q9BVN2-2|RUSC1;nc|ENSG00000160753|Q9BVN2-3|RUSC1;nc|ENSG00000160753|Q9BVN2-4|RUSC1;ENSG00000160753|ENST00000368352|RUSC1	nc|ENSG00000160753|Q9BVN2-2|RUSC1	nc|ENSG00000160753|Q9BVN2-2|RUSC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	900.5910522341728	1	900.587679	899.580402	3.0739	0.0027683	-0.29133	-0.00026237	2.7825	0.0025059	900.5871826803665	106.7	0.51402	106.86	106.5	107.02	0.16174					34	24	2	0	0	0	0.89178	1	45702	45702		0.69038	0	1	5435700			39063	3573	19184	19266	45332	45332					0.12659538690877525
VLRVITTV	8	Unmodified	_VLRVITTV_					0	0	0		nc|ENSG00000160753|Q9BVN2-2|RUSC1;nc|ENSG00000160753|Q9BVN2-3|RUSC1;nc|ENSG00000160753|Q9BVN2-4|RUSC1;ENSG00000160753|ENST00000368352|RUSC1	nc|ENSG00000160753|Q9BVN2-2|RUSC1	nc|ENSG00000160753|Q9BVN2-2|RUSC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	900.587679	899.580402	2.8765	0.0025906	-0.47594	-0.00042862	2.4006	0.0021619	900.587433476072	106.55	0.3297	106.7	106.66	106.99	0.15781	-0.078562	-0.00010448	NaN	0.69038	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6261200			39064	3573	19184	19266							0.12659538690877525
VLSALLKGK	9	Unmodified	_VLSALLKGK_					0	0	0		tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.8147155642509	2	464.813128	927.611703	1.5376	0.00071468	1.932	0.00089803	3.4696	0.0016127	464.8139402354727	106.2	0.17036	106.2	106.11	106.28	0					23	8	4	0	0	0	0.77526	1	45241	45241		4.3292	0	1	174140000			39065	16212	19185	19267	45333	45333					0.1450011172498762
VLSALLKGK	9	Unmodified	_VLSALLKGK_					0	0	0		tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	tr|A0A553SIP0|A0A553SIP0_NIACIGlycosyltransferasefamily2proteinOS=NialliacirculansOX=1397GN=CEQ21_15190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.8134948611259	2	464.813128	927.611703	3.5454	0.001648	-1.3153	-0.00061137	2.2301	0.0010366	464.8124733986848	106.1	0.19527	106.26	106.17	106.36	0.16174					38	10	5	0	0	0	0.77526	1	45271	45271		4.3292	0	1	875610000			39066	16212	19185	19267	45334	45334					0.1450011172498762
VLSASLLALGV	11	Unmodified	_VLSASLLALGV_					0	0	0			REV__ENST00000308660.5_1_5:126366123-126366321:-|nuORF	REV__ENST00000308660.5_1_5:126366123-126366321:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.2657348513603	2	521.828975	1041.6434	2.0981	0.0010948	1.2933	0.00067487	3.3913	0.0017697	521.8290698640204	43.773	0.18758	45.717	45.546	45.734	1.9438					6	5	2	0	0	0	0.14606	1	18343	18343		10.824	0	1	251980	+		39067	12352	19186	19268	45335	45335					0.12424059688282796
VLSELLWQV	9	Unmodified	_VLSELLWQV_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.8146850466728	2	543.813325	1085.6121	2.2878	0.0012442	0.54366	0.00029565	2.8315	0.0015398	543.81377294082	85.308	0.47272	85.308	85.1	85.572	0					33	14	3	0	0	0	0.046276	2	35562	35515;35562		70.716	24.695	1	3475900			39068	1860	19187	19269	45336;45337	45337					0.07271486654190085
VLSELLWQV	9	Unmodified	_VLSELLWQV_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8150512576103	2	543.813325	1085.6121	2.5606	0.0013925	0.44236	0.00024056	3.003	0.0016331	543.8139147242441	84.818	0.41344	85.079	84.886	85.299	0.26083					33	12	3	0	0	0	0.03795	3	35480	35433;35480;35535		77.984	31.963	1	3130200			39069	1860	19187	19269	45338;45339;45340	45339					0.07271486654190085
VLSELLWQV	9	Unmodified	_VLSELLWQV_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1086.621386706829	1	1086.61937	1085.6121	3.3586	0.0036496	0.83873	0.00091138	4.1974	0.0045609	1086.6218439542433	84.819	0.1909	85.08	84.951	85.142	0.26083					9	5	2	0	0	0	0.076627	1	35471	35471		57.471	19.497	1	608720			39070	1860	19187	19269	45341	45341					0.07271486654190085
VLSELLWQV	9	Unmodified	_VLSELLWQV_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8151733279228	2	543.813325	1085.6121	1.3499	0.00073408	-0.34538	-0.00018782	1.0045	0.00054626	543.813169035215	83.944	0.38434	85.132	84.923	85.307	1.1879					33	12	3	0	0	0	0.028763	3	35182	35182;35230;35277		89.427	41.081	1	10265000			39071	1860	19187	19269	45342;45343;45344	45342					0.07271486654190085
VLSELLWQV	9	Unmodified	_VLSELLWQV_					0	0	0		ENSG00000114374|ENST00000338981|USP9Y;ENSG00000124486|ENST00000378308|USP9X;nc|ENSG00000124486|Q93008-3|USP9X	ENSG00000114374|ENST00000338981|USP9Y	ENSG00000114374|ENST00000338981|USP9Y	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8134643435478	2	543.813325	1085.6121	1.6338	0.00088846	-0.40694	-0.0002213	1.2268	0.00066716	543.8131545701805	83.488	0.42903	85.125	84.886	85.315	1.6379					31	13	3	0	0	0	0.028763	2	35044	34997;35044		89.427	43.406	1	8427000			39072	1860	19187	19269	45345;45346	45346					0.07271486654190085
VLSEPEEEGPR	11	Unmodified	_VLSEPEEEGPR_					0	0	0			REV__ENST00000498102.1_1_3:42575978-42576026:+|nuORF	REV__ENST00000498102.1_1_3:42575978-42576026:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	621.3036987185478	2	621.304049	1240.59355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.605	1	26.605	26.105	27.105	0								0	0	0	0.63775	1	11115	11115		3.2813	0.28607	1		+		39073	13487	19188	19270	45347	45347					-0.017127197783338488
VLSFLLQRS	9	Unmodified	_VLSFLLQRS_					0	0	0			REV__ENSG00000181733|ENST00000641125|OR2Z1	REV__ENSG00000181733|ENST00000641125|OR2Z1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.8146240115166	2	531.818941	1061.62333	2.0051	0.0010664	-3.3342	-0.0017732	-1.3291	-0.00070684	531.8174501350632	66.417	1.2268	67.806	67.299	68.526	1.3888					62	39	2	0	0	0	0.10591	1	28072	28072		19.257	1.1106	1	1491800	+		39074	11330	19189	19271	45348	45348					0.09498308748334239
VLSFLLQRS	9	Unmodified	_VLSFLLQRS_					0	0	0			REV__ENSG00000181733|ENST00000641125|OR2Z1	REV__ENSG00000181733|ENST00000641125|OR2Z1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	531.818941	1061.62333	1.7003	0.00090423	-2.715	-0.0014439	-1.0147	-0.00053963	531.817307556256	67.295	1.3093	67.295	66.829	68.139	0	-0.30003	0.00024973	NaN	19.257	63	41	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1300800	+		39075	11330	19189	19271							0.09498308748334239
VLSFLLQRS	9	Unmodified	_VLSFLLQRS_					0	0	0			REV__ENSG00000181733|ENST00000641125|OR2Z1	REV__ENSG00000181733|ENST00000641125|OR2Z1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.818941	1061.62333	1.8263	0.00097127	-2.9211	-0.0015535	-1.0948	-0.00058222	531.8168771833272	67.361	2.19	67.684	66.999	69.189	0.32268	0.088831	3.0491E-05	NaN	19.257	109	70	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1242600	+		39076	11330	19189	19271							0.09498308748334239
VLSGKKLAI	9	Unmodified	_VLSGKKLAI_					0	0	0		tr|A0A7D7A2D6|A0A7D7A2D6_9CLOTUracilphosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=uppPE=3SV=1	tr|A0A7D7A2D6|A0A7D7A2D6_9CLOTUracilphosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=uppPE=3SV=1	tr|A0A7D7A2D6|A0A7D7A2D6_9CLOTUracilphosphoribosyltransferaseOS=ClostridiumintestinaleOX=36845GN=uppPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.8139831423759	2	464.813128	927.611703	1.5388	0.00071527	-0.14878	-6.9153E-05	1.3901	0.00064612	464.81350273685734	107.75	0.27075	107.75	107.62	107.89	0					49	14	5	0	0	0	0.85403	1	46302	46302		0	0	1	1548499999.9999998			39077	17253	19190	19272	45349	45349					0.14500111724964881
VLSGKTNR	8	Unmodified	_VLSGKTNR_					0	0	0		tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	874.5133544802666	1	874.510491	873.503215	3.0655	0.0026808	-0.30416	-0.00026599	2.7614	0.0024149	874.5106103647734	106.6	0.12244	106.76	106.7	106.82	0.15781					12	5	3	0	0	0	0.89176	1	45697	45697		0.79363	0	1	32234000			39078	16069	19191	19273	45350	45350					0.06140320474548844
VLSGKTNR	8	Unmodified	_VLSGKTNR_					0	0	0		tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	tr|A0A553SFN4|A0A553SFN4_NIACIAcetylglutamatekinaseOS=NialliacirculansOX=1397GN=argBPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	874.510491	873.503215	3.1489	0.0027538	0.112	9.7947E-05	3.2609	0.0028517	874.5109297498642	106.61	0.11179	106.77	106.71	106.82	0.16174	0.0058851	0.00022279	NaN	0.79363	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16491000			39079	16069	19191	19273							0.06140320474548844
VLSGLIIFAV	10	Unmodified	_VLSGLIIFAV_					0	0	0			REV__ENSG00000180730|ENST00000319420|SHISA2	REV__ENSG00000180730|ENST00000319420|SHISA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3308593630791	2	516.328611	1030.64267	3.1639	0.0016336	1.3579	0.00070114	4.5219	0.0023348	516.3291122134036	61.678	0.31136	63.096	62.927	63.238	1.4177					22	9	3	0	0	0	0.12991	1	25865	25865		58.679	3.1761	1	2319500	+		39080	11301	19192	19274	45351	45351					0.12857265039201593
VLSGPPAVA	9	Unmodified	_VLSGPPAVA_					0	0	0		ENST00000518140.5_1_5:168199753-168727722:-|nuORF;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;ENST00000521130.1_1_5:168547122-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	810.4733154177666	1	810.47198	809.464704	0.36817	0.00029839	1.2546	0.0010168	1.6228	0.0013152	810.4733546536838	30.908	0.28402	32.19	32.028	32.312	1.2825					15	8	3	0	0	0	0.09539	1	12992	12992		50.855	8.7605	1	1110400			39081	4690	19193	19275	45352	45352					0.05235014840036456
VLSGPPAVA	9	Unmodified	_VLSGPPAVA_					0	0	0		ENST00000518140.5_1_5:168199753-168727722:-|nuORF;nc|ENSG00000184347|O75094-2|SLIT3;nc|ENSG00000184347|O75094-3|SLIT3;ENSG00000184347|ENST00000519560|SLIT3;nc|ENSG00000184347|O75094-4|SLIT3;ENST00000521130.1_1_5:168547122-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	ENST00000518140.5_1_5:168199753-168727722:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	810.47198	809.464704	0.51775	0.00041962	1.0556	0.00085552	1.5733	0.0012751	810.4732989382325	30.402	0.28228	32.217	32.075	32.358	1.8151	0.013104	-9.7508E-05	NaN	50.855	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1258900			39082	4690	19193	19275							0.05235014840036456
VLSLLHAKEP	10	Unmodified	_VLSLLHAKEP_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.8313476443291	2	553.832049	1105.64954	1.2808	0.00070934	-3.4528	-0.0019123	-2.172	-0.0012029	553.8299026937078	69.985	2.2819	70.308	69.501	71.782	0.32224					140	72	3	0	0	0	0.77604	1	29154	29154		14.838	1.3304	1	2160700	+		39083	9306	19194	19276	45353	45353					0.10094577919812764
VLSNKLRQ	8	Unmodified	_VLSNKLRQ_					0	0	0		TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	TAS2R8|p.N289S|1|0.14|ENSG00000121314|chr12:10806115-10806115|T/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2980224490166	2	479.295633	956.576714	5.7849	0.0027727	-0.53098	-0.0002545	5.2539	0.0025182	479.295114870902	88.424	0.38659	89.48	89.272	89.659	1.0562					24	11	3	0	0	0	0.89178	1	37290	37290		0.69038	0	1	1016400			39084	16019	19195	19277	45354	45354					0.0966886891702643
VLSNVEVTL	9	Unmodified	_VLSNVEVTL_					0	0	0		DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant;DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant;ENSG00000197102|ENST00000360184|DYNC1H1;DYNC1H1|p.P2596Tfs*19|1|0.06|ENSG00000197102|chr14:102016936-102016937|-/A|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	DYNC1H1|p.F3496Wfs*92|1|0.14|ENSG00000197102|chr14:102034043-102034044|-/GACCTGGCAGCTGTCGAGGC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	487.2811157107353	2	487.281857	972.549162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.389	1	55.358	54.858	55.858	1.9697								0	0	0	0.27791	1	22368	22368		20.454	5.6154	1				39085	433	19196	19278	45355	45355					0.06178920866148019
VLSQQPFTL	9	Unmodified	_VLSQQPFTL_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;nc|ENSG00000155657|Q8WZ42-2|TTN;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2918578982353	2	516.78985	1031.56515	2.2454	0.0011604	0.60172	0.00031096	2.8471	0.0014714	516.7895187151346	78.253	0.80824	79.988	79.542	80.35	1.735					52	25	4	0	0	0	0.54523	1	32702	32702		13.508	0	1	4183900			39086	3425;7900	19197	19279	45356	45356					0.05062627103052364
VLSVIKGKKI	10	Unmodified	_VLSVIKGKKI_					0	0	0			REV__nc|ENSG00000125775|Q9H190-3|SDCBP2	REV__nc|ENSG00000125775|Q9H190-3|SDCBP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	362.2541992068291	3	362.253265	1083.73797	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.261	1	65.588	65.088	66.088	0.32689								0	0	0	0.66264	1	27330	27330		0	0	1		+		39087	9679	19198	19280	45357	45357					0.19944618230283595
VLSYKRLEI	9	Unmodified	_VLSYKRLEI_					0	0	0		ENST00000462887.1_1_10:99496996-99498486:+|nuORF;ZFYVE27|p.K254Efs*26|1|0.08|ENSG00000155256|chr10:97750419-97750420|-/G|frameshift_variant;nc|ENSG00000155256|Q5T4F4-6|ZFYVE27;nc|ENSG00000155256|Q5T4F4-5|ZFYVE27;nc|ENSG00000155256|Q5T4F4-8|ZFYVE27;nc|ENSG00000155256|Q5T4F4-2|ZFYVE27;ENSG00000155256|ENST00000684270|ZFYVE27;nc|ENSG00000155256|Q5T4F4-3|ZFYVE27	ENST00000462887.1_1_10:99496996-99498486:+|nuORF	ENST00000462887.1_1_10:99496996-99498486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.8403198122978	2	560.839874	1119.66519	1.208	0.0006775	0.79866	0.00044792	2.0067	0.0011254	560.840226809386	38.004	0.35186	39.288	39.049	39.401	1.284					28	12	3	0	0	0	0.17276	1	15957	15957		36.127	1.195	1	3681000			39088	3411	19199	19281	45358	45358					0.11014864436833705
VLTLAFRK	8	Unmodified	_VLTLAFRK_					0	0	0			REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	REV__ENST00000549185.5_3_14:31803609-31872202:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	474.3067809939384	2	474.30547	946.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.921	1	72.921	72.421	73.421	0								0	0	0	1.0178	1	30360	30360		0.69038	0	1		+		39089	9758	19200	19282	45359	45359					0.12095244927797921
VLTQNFTGNT	10	Unmodified	_VLTQNFTGNT_					0	0	0			REV__ENSG00000166535|ENST00000299698|A2ML1	REV__ENSG00000166535|ENST00000299698|A2ML1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.8129760622978	2	547.77747	1093.54039	1.3375	0.00073264	-1.0437	-0.0005717	0.29379	0.00016093	547.7767289172205	66.878	0.18274	68.766	68.646	68.828	1.8889					9	5	2	0	0	0	0.12384	1	28008	28008		13.042	9.7612	1	343680	+		39090	10830	19201	19283	45360	45360					-0.0026405277033063612
VLTSIFKH	8	Unmodified	_VLTSIFKH_					0	0	0		nc|ENSG00000153064|Q8NDB2-4|BANK1;nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1	nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	944.5612060427666	1	944.556379	943.549102	1.5349	0.0014498	1.4379	0.0013582	2.9728	0.002808	944.5589102618978	66.862	0.3464	68.25	67.996	68.343	1.3888					15	10	2	0	0	0	0.66111	1	28039	28039		34.187	6.0141	1	821700			39091	3344	19202	19284	45361	45361					0.07506965656807552
VLTSIFKH	8	Unmodified	_VLTSIFKH_					0	0	0		nc|ENSG00000153064|Q8NDB2-4|BANK1;nc|ENSG00000153064|Q8NDB2-3|BANK1;nc|ENSG00000153064|Q8NDB2-2|BANK1;ENSG00000153064|ENST00000322953|BANK1	nc|ENSG00000153064|Q8NDB2-4|BANK1	nc|ENSG00000153064|Q8NDB2-4|BANK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	944.556379	943.549102	1.9002	0.0017949	-1.2863	-0.001215	0.6139	0.00057987	944.5559887269069	66.353	0.25266	68.242	68.057	68.309	1.8889	-0.0040891	-0.0019057	NaN	34.187	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	808550			39092	3344	19202	19284							0.07506965656807552
VLTSVEQK	8	Unmodified	_VLTSVEQK_					0	0	0		ENST00000302764.8_1_5:162880914-162881052:-|nuORF	ENST00000302764.8_1_5:162880914-162881052:-|nuORF	ENST00000302764.8_1_5:162880914-162881052:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2601501345634	2	452.260925	902.507297	0.3486	0.00015766	0.26969	0.00012197	0.61829	0.00027963	452.26033795234366	13.576	0.11128	14.404	14.342	14.453	0.82789					6	3	2	0	0	0	0.79422	1	5642	5642		21.747	0	1	686130			39093	5765	19203	19285	45362	45362					0.05214365177619129
VLTSVEQK	8	Unmodified	_VLTSVEQK_					0	0	0		ENST00000302764.8_1_5:162880914-162881052:-|nuORF	ENST00000302764.8_1_5:162880914-162881052:-|nuORF	ENST00000302764.8_1_5:162880914-162881052:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	452.260925	902.507297	0.18484	8.3597E-05	-0.13348	-6.0368E-05	0.051363	2.323E-05	452.26054942803376	13.73	0.18591	14.457	14.349	14.535	0.72639	0.026302	-6.3319E-05	NaN	21.747	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	678090			39094	5765	19203	19285							0.05214365177619129
VLTTAGLLV	9	Unmodified	_VLTTAGLLV_					0	0	0			REV__nc|ENSG00000142166|P17181-2|IFNAR1	REV__nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	886.5629760622978	1	886.560795	885.553519	1.9849	0.0017598	0.70438	0.00062447	2.6893	0.0023842	886.5610926767321	63.687	0.40277	65.095	64.869	65.272	1.4071					32	12	3	0	0	0	0.03795	2	26681	26681;26734		77.984	3.588	1	7131800	+		39095	10170	19204	19286	45363;45364	45363					0.10616430079710426
VLTTAGLLV	9	Unmodified	_VLTTAGLLV_					0	0	0			REV__nc|ENSG00000142166|P17181-2|IFNAR1	REV__nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	886.5627929568291	1	886.560795	885.553519	2.1096	0.0018703	0.73212	0.00064907	2.8417	0.0025193	886.5611643714639	63.192	0.40415	65.137	64.875	65.279	1.9444					30	12	3	0	0	0	0.03795	2	26482	26482;26532		77.984	7.2688	1	6303700	+		39096	10170	19204	19286	45365;45366	45365					0.10616430079710426
VLTTAGLLV	9	Unmodified	_VLTTAGLLV_					0	0	0			REV__nc|ENSG00000142166|P17181-2|IFNAR1	REV__nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	886.560795	885.553519	1.9849	0.0017598	0.70438	0.00062447	2.6893	0.0023842	886.5610926767321	63.687	0.40277	65.095	64.869	65.272	1.4071	-0.11554	0.00018903	NaN	77.984	32	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7131800	+		39097	10170	19204	19286							0.10616430079710426
VLTTAGLLV	9	Unmodified	_VLTTAGLLV_					0	0	0			REV__nc|ENSG00000142166|P17181-2|IFNAR1	REV__nc|ENSG00000142166|P17181-2|IFNAR1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	886.560795	885.553519	2.1096	0.0018703	0.73212	0.00064907	2.8417	0.0025193	886.5611643714639	63.192	0.40415	65.137	64.875	65.279	1.9444	-0.073568	0.00021363	NaN	77.984	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6303700	+		39098	10170	19204	19286							0.10616430079710426
VLTTIYVTL	9	Unmodified	_VLTTIYVTL_					0	0	0			REV__ENST00000462705.5_1_3:114693258-114790210:-|nuORF	REV__ENST00000462705.5_1_3:114693258-114790210:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.8110229372978	2	511.810251	1021.60595	3.1088	0.0015911	-2.8291	-0.001448	0.27967	0.00014314	511.8088815460995	84.822	0.26952	86.419	86.219	86.488	1.5962					14	8	2	0	0	0	0.20671	1	35561	35561		32.305	0	1	1354400	+		39099	13210	19205	19287	45367	45367					0.09600968422660117
VLTTIYVTL	9	Unmodified	_VLTTIYVTL_					0	0	0			REV__ENST00000462705.5_1_3:114693258-114790210:-|nuORF	REV__ENST00000462705.5_1_3:114693258-114790210:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	511.810251	1021.60595	2.9209	0.001495	-6.9282	-0.0035459	-4.0072	-0.0020509	512.3075857413484	86.665	0.14622	86.665	86.551	86.697	0	0.15999	-0.0032542	NaN	32.305	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	517130	+		39100	13210	19205	19287							0.09600968422660117
VLTTLDKL	8	Unmodified	_VLTTLDKL_					0	0	0			REV__ENSG00000127603|ENST00000564288|MACF1	REV__ENSG00000127603|ENST00000564288|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.7814819216728	2	451.781493	901.548434	1.5821	0.00071478	-1.2625	-0.00057035	0.31968	0.00014442	451.7806213585282	68.04	0.88654	68.04	67.85	68.737	0					41	27	2	0	0	0	0.89051	1	28352	28352		2.3027	0	1	1297300	+		39101	9720	19206	19288	45368	45368					0.09372126217078858
VLTTPFFLNY	10	Unmodified	_VLTTPFFLNY_					0	0	0			REV__ENSG00000132874|ENST00000255226|SLC14A2	REV__ENSG00000132874|ENST00000255226|SLC14A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	607.8262206912041	2	607.826432	1213.63831	1.2693	0.00077153	-0.88609	-0.00053859	0.38324	0.00023294	607.8256963970127	69.401	0.43958	69.723	69.501	69.94	0.32224					38	13	4	0	0	0	0.38174	1	29058	29058		34.402	5.3201	1	4282000	+		39102	9862	19207	19289	45369	45369					0.040037558256926786
VLTVCSFVLLI	11	Unmodified	_VLTVCSFVLLI_					0	0	0		nc|ENSG00000186092|Q8NH21|OR4F5;nc|ENSG00000177693|Q96R69|OR4F4;ENSG00000176695|ENST00000585993|OR4F17;ENSG00000177693|ENST00000650172|OR4F4;ENSG00000186092|ENST00000641515|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	603.8605834841728	2	603.86196	1205.70937	2.6176	0.0015807	-3.9293	-0.0023727	-1.3116	-0.00079205	603.8590806683891	96.917	0.1908	97.022	96.941	97.132	0.105					7	5	2	0	0	0	0.2718	1	40567	40567		34.402	2.0962	1	1126200			39103	4416	19208	19290	45370	45370					0.11474132538842241
VLTVCSFVLLI	11	Unmodified	_VLTVCSFVLLI_					0	0	0		nc|ENSG00000186092|Q8NH21|OR4F5;nc|ENSG00000177693|Q96R69|OR4F4;ENSG00000176695|ENST00000585993|OR4F17;ENSG00000177693|ENST00000650172|OR4F4;ENSG00000186092|ENST00000641515|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	603.86196	1205.70937	1.8372	0.0011094	-6.5112	-0.0039318	-4.674	-0.0028224	603.8578178660932	97.042	0.15529	97.042	96.925	97.08	0	0.020759	-0.0014455	NaN	34.402	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	755680			39104	4416	19208	19290							0.11474132538842241
VLTVCSFVLLI	11	Unmodified	_VLTVCSFVLLI_					0	0	0		nc|ENSG00000186092|Q8NH21|OR4F5;nc|ENSG00000177693|Q96R69|OR4F4;ENSG00000176695|ENST00000585993|OR4F17;ENSG00000177693|ENST00000650172|OR4F4;ENSG00000186092|ENST00000641515|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	nc|ENSG00000186092|Q8NH21|OR4F5	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	603.86196	1205.70937	3.8173	0.0023051	-6.375	-0.0038496	-2.5577	-0.0015445	603.8579244720901	96.716	0.12373	97.001	96.923	97.047	0.28442	-0.020893	-0.0012811	NaN	34.402	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1172700			39105	4416	19208	19290							0.11474132538842241
VLTYLLNLA	9	Unmodified	_VLTYLLNLA_					0	0	0			REV__ENSG00000106537|ENST00000262067|TSPAN13	REV__ENSG00000106537|ENST00000262067|TSPAN13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	510.3110534548759	2	510.310418	1018.60628	1.9568	0.00099859	-2.4548	-0.0012527	-0.498	-0.00025413	510.30935676662153	41.21	0.28973	41.21	41.017	41.307	0					12	8	2	0	0	0	0.75267	1	17236	17236		5.2307	0	1	290560	+		39106	9211	19209	19291	45371	45371					0.09772388142505406
VLTYLLNLA	9	Unmodified	_VLTYLLNLA_					0	0	0			REV__ENSG00000106537|ENST00000262067|TSPAN13	REV__ENSG00000106537|ENST00000262067|TSPAN13	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	510.310418	1018.60628	1.9568	0.00099859	-2.4548	-0.0012527	-0.498	-0.00025413	510.30935676662153	41.21	0.28973	41.21	41.017	41.307	0	0	0	NaN	5.2307	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290560	+		39107	9211	19209	19291							0.09772388142505406
VLVAFRELV	9	Unmodified	_VLVAFRELV_					0	0	0		ENST00000453932.1_1_7:76099481-76100288:-|nuORF	ENST00000453932.1_1_7:76099481-76100288:-|nuORF	ENST00000453932.1_1_7:76099481-76100288:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3258544802666	2	523.32386	1044.63317	2.2878	0.0011973	1.5147	0.0007927	3.8025	0.00199	523.3249003193754	72.957	0.50883	73.282	72.986	73.494	0.32494					33	15	3	0	0	0	0.35391	1	30478	30478		22.736	3.4793	1	2139200			39108	6634	19210	19292	45372	45372					0.1126349675369056
VLVDRTIYI	9	Unmodified	_VLVDRTIYI_					0	0	0		ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.3298217654228	2	546.326599	1090.63865	1.7153	0.00093712	1.5763	0.00086119	3.2916	0.0017983	546.3278655241893	50.992	0.2848	50.992	50.85	51.135	0					22	8	3	0	0	0	0.13623	2	21248	21248;21303		40.239	10.014	1	2257400			39109	2539	19211	19293	45373;45374	45373					0.09695175545516577
VLVDRTIYI	9	Unmodified	_VLVDRTIYI_					0	0	0		ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3295165896416	2	546.326599	1090.63865	1.7168	0.00093792	2.984	0.0016303	4.7008	0.0025682	546.3284387627712	50.487	0.34435	50.815	50.637	50.981	0.32824					26	10	3	0	0	0	0.13623	2	21181	21129;21181		40.239	4.195	1	1531200			39110	2539	19211	19293	45375;45376	45376					0.09695175545516577
VLVDRTIYI	9	Unmodified	_VLVDRTIYI_					0	0	0		ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	ENSG00000132541|ENST00000254878|RIDA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3298217654228	2	546.326599	1090.63865	1.9452	0.0010627	1.2393	0.00067709	3.1845	0.0017398	546.327538543514	48.655	0.43348	50.632	50.359	50.792	1.9772					31	13	3	0	0	0	0.071837	1	20420	20420		59.368	7.1	1	5255400			39111	2539	19211	19293	45377	45377					0.09695175545516577
VLVDWLLKQRR	11	Unmodified	_VLVDWLLKQRR_					0	0	0			REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	475.9621765017509	3	475.961144	1424.8616	0.82785	0.00039402	0.055166	2.6257E-05	0.88301	0.00042028	475.96244168629164	51.308	2.4007	52.702	52.226	54.627	1.3938					231	78	6	0	0	0	0.93654	3	21367	21367;21495;21619		6.2344	2.6417	1	578340000	+		39112	12497	19212	19294	45378;45379;45380	45378					0.1661666933057404
VLVDWLLKQRR	11	Unmodified	_VLVDWLLKQRR_					0	0	0			REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	713.4383422732353	2	713.438078	1424.8616	0.19266	0.00013745	0.067517	4.8169E-05	0.26017	0.00018562	713.4381738620795	51.3	0.97182	52.694	52.316	53.287	1.3938					108	32	5	0	0	0	0.96769	3	21508	21508;21595;21647		5.7319	0	1	44641000	+		39113	12497	19212	19294	45381;45382;45383	45381					0.1661666933057404
VLVDWLLKQRR	11	Unmodified	_VLVDWLLKQRR_					0	0	0			REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	475.9612914919853	3	475.961144	1424.8616	0.49385	0.00023505	0.17329	8.2477E-05	0.66713	0.00031753	475.96273407866005	50.646	2.1044	52.621	52.219	54.323	1.9753					251	72	7	0	0	0	0.97491	3	21133	21133;21352;21391		2.4348	1.1051	1	734820000	+		39114	12497	19212	19294	45384;45385;45386	45384					0.1661666933057404
VLVDWLLKQRR	11	Unmodified	_VLVDWLLKQRR_					0	0	0			REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4379760622978	2	713.438078	1424.8616	-0.28767	-0.00020523	0.38766	0.00027657	0.099989	7.1336E-05	713.4383439513542	50.681	1.0597	52.656	52.308	53.367	1.9753					103	38	5	0	0	0	0.85967	5	21288	21140;21185;21236;21288;21329		12.241	0	1	63745000	+		39115	12497	19212	19294	45387;45388;45389;45390;45391	45390					0.1661666933057404
VLVDWLLKQRR	11	Unmodified	_VLVDWLLKQRR_					0	0	0			REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	REV__ENST00000341189.8_1_X:100881584-100881641:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	713.9402343630791	2	713.438078	1424.8616	-0.28767	-0.00020523	0.38766	0.00027657	0.099989	7.1336E-05	713.4383439513542	50.681	1.0597	52.656	52.308	53.367	1.9753					103	38	5	0	0	0	0.14606	1	21140	21140		5.7319	0	1	63745000	+		39116	12497	19212	19294	45392	45392					0.1661666933057404
VLVFFKRKP	9	Unmodified	_VLVFFKRKP_					0	0	0			REV__ENST00000468388.5_1_1:26799103-26800010:+|nuORF	REV__ENST00000468388.5_1_1:26799103-26800010:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.5789062380791	3	378.577972	1132.71209	0.51866	0.00019635	0.79021	0.00029916	1.3089	0.00049551	378.57817179573243	29.391	0.67082	31.19	31.051	31.721	1.7987					61	21	4	0	0	0	0.8462	3	12271	12271;12319;12373		1.0715	0	1	30840000	+		39117	13256	19213	19295	45393;45394;45395	45393					0.1510376877863564
VLVFFKRKP	9	Unmodified	_VLVFFKRKP_					0	0	0			REV__ENST00000468388.5_1_1:26799103-26800010:+|nuORF	REV__ENST00000468388.5_1_1:26799103-26800010:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	378.577972	1132.71209	0.065002	2.4608E-05	2.0172	0.00076368	2.0822	0.00078829	378.57885467350343	29.498	0.63838	30.78	30.404	31.042	1.2825	-0.2334	0.00051097	NaN	1.0715	97	20	6	NaN	NaN	NaN	NaN	0				NaN	NaN	0	157790000	+		39118	13256	19213	19295							0.1510376877863564
VLVHTTIL	8	Unmodified	_VLVHTTIL_					0	0	0		ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2862731814384	2	448.284203	894.553853	3.3618	0.001507	2.0298	0.00090992	5.3915	0.0024169	448.28506800175654	109.17	0.30782	109.33	109.23	109.54	0.15898					36	14	3	0	0	0	0.89176	1	47377	47377		0.79363	0	1	33488000			39119	5533	19214	19296	45396	45396					0.10235849799562402
VLVHTTIL	8	Unmodified	_VLVHTTIL_					0	0	0		ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	448.2859069705009	2	448.284203	894.553853	3.4016	0.0015249	0.83683	0.00037514	4.2384	0.0019	448.2843742942645	109.18	0.47956	109.33	109.03	109.51	0.1548					41	22	3	0	0	0	0.89176	1	47286	47286		0.79363	0	1	37535000			39120	5533	19214	19296	45397	45397					0.10235849799562402
VLVHTTIL	8	Unmodified	_VLVHTTIL_					0	0	0		ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	448.284203	894.553853	1.0643	0.00047712	5.6759	0.0025444	6.7402	0.0030215	448.28696225376325	109.26	0.13687	109.26	109.17	109.3	0	-0.035553	0.0035089	NaN	0.79363	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4199800			39121	5533	19214	19296							0.10235849799562402
VLVHTTIL	8	Unmodified	_VLVHTTIL_					0	0	0		ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	ENST00000222690.10_1_7:44869386-44869509:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	448.284203	894.553853	3.2766	0.0014689	3.3988	0.0015236	6.6755	0.0029925	448.28563674623706	109.23	0.13837	109.28	109.22	109.36	0.048843	-0.023152	0.0014674	NaN	0.79363	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2142000			39122	5533	19214	19296							0.10235849799562402
VLVILIVLP	9	Unmodified	_VLVILIVLP_					0	0	0			REV__ENSG00000158481|ENST00000368170|CD1C	REV__ENSG00000158481|ENST00000368170|CD1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.8513671755791	2	489.851722	977.68889	1.0837	0.00053084	-2.0213	-0.00099012	-0.9376	-0.00045928	489.85109725366004	101.67	0.11968	101.67	101.59	101.71	0					6	3	2	0	0	0	0.85403	1	42585	42585		0	0	1	1871000	+		39123	10555	19215	19297	45398	45398					0.19915329941306936
VLVILIVLP	9	Unmodified	_VLVILIVLP_					0	0	0			REV__ENSG00000158481|ENST00000368170|CD1C	REV__ENSG00000158481|ENST00000368170|CD1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	489.851722	977.68889	1.0837	0.00053084	-2.0213	-0.00099012	-0.9376	-0.00045928	489.85109725366004	101.67	0.11968	101.67	101.59	101.71	0	0.0045801	6.8622E-05	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1871000	+		39124	10555	19215	19297							0.19915329941306936
VLVILIVLP	9	Unmodified	_VLVILIVLP_					0	0	0			REV__ENSG00000158481|ENST00000368170|CD1C	REV__ENSG00000158481|ENST00000368170|CD1C	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	489.851722	977.68889	3.4567	0.0016933	-2.1274	-0.0010421	1.3293	0.00065117	489.850636351064	101.59	0.12355	101.66	101.58	101.7	0.067009	-0.0045801	-3.5358E-05	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1969100	+		39125	10555	19215	19297							0.19915329941306936
VLVILLIALV	10	Unmodified	_VLVILLIALV_					0	0	0			REV__ENSG00000135749|ENST00000258229|PCNX2	REV__ENSG00000135749|ENST00000258229|PCNX2	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.3856689333916	2	533.385929	1064.7573	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.49	1	108.54	108.04	109.04	0.050644								0	0	0	0.66264	1	46643	46643		0	0	1		+		39126	9953	19216	19298	45399	45399					0.22751574521157636
VLVIVVICL	9	Unmodified	_VLVIVVICL_					0	0	0		ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2170593142509	3	324.217163	969.629661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.259	1	19.453	18.953	19.953	0.19342								0	0	0	0.42693	1	7998	7998		0	0	1				39127	3166	19217	19299	45400	45400					0.14363110655460787
VLVIVVICL	9	Unmodified	_VLVIVVICL_					0	0	0		ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2159911990166	3	324.217163	969.629661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4174	1	10.068	9.568	10.568	0.65058								0	0	0	0.42693	1	3913	3913		0	0	1				39128	3166	19217	19299	45401	45401					0.14363110655460787
VLVIVVICL	9	Unmodified	_VLVIVVICL_					0	0	0		ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2162658572197	3	324.217163	969.629661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.527	1	10.178	9.6775	10.678	0.65058								0	0	0	0.42693	1	3958	3958		0	0	1				39129	3166	19217	19299	45402	45402					0.14363110655460787
VLVIVVICL	9	Unmodified	_VLVIVVICL_					0	0	0		ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	ENSG00000146859|ENST00000275767|TMEM140	MSMS	GG20161007_CRH_Patient100_W632_02	4	324.2175475955009	3	324.217163	969.629661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.46	1	105.63	105.13	106.13	0.16679								0	0	0	0.42693	1	44861	44861		0	0	1				39130	3166	19217	19299	45403	45403					0.14363110655460787
VLVKNPINI	9	Unmodified	_VLVKNPINI_					0	0	0			REV__ENST00000393452.7_1_14:90509523-90509682:+|nuORF	REV__ENST00000393452.7_1_14:90509523-90509682:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3251830935478	2	505.32386	1008.63317	1.7618	0.0008903	0.40893	0.00020664	2.1708	0.0010969	505.3240376837506	39.86	0.40315	41.722	41.552	41.956	1.8624					24	12	2	0	0	0	0.54523	1	16682	16682		13.508	0	1	4540100	+		39131	12812	19218	19300	45404	45404					0.12919496753693238
VLVKRKLVH	9	Unmodified	_VLVKRKLVH_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.3749267458916	2	546.374218	1090.73388	3.2223	0.0017606	-1.4112	-0.00077102	1.8111	0.00098957	546.3737119211261	109.33	0.35863	109.48	109.34	109.7	0.1548					35	15	3	0	0	0	0.85019	1	47380	47380		0.52476	0	1	7670800			39132	2104	19219	19301	45405	45405					0.19214573527210632
VLVKRKLVH	9	Unmodified	_VLVKRKLVH_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	546.374218	1090.73388	2.745	0.0014998	-0.57556	-0.00031447	2.1694	0.0011853	546.3742747659753	109.34	0.38193	109.39	109.27	109.65	0.048843	-0.051706	0.00020766	NaN	0.52476	30	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9320000			39133	2104	19219	19301							0.19214573527210632
VLVKRKLVH	9	Unmodified	_VLVKRKLVH_					0	0	0		ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	ENSG00000120440|ENST00000239587|TTLL2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	546.374218	1090.73388	2.9769	0.0016265	-2.457	-0.0013425	0.51985	0.00028403	546.3723459275285	109.34	0.34963	109.5	109.35	109.7	0.15898	0.054485	-0.0018483	NaN	0.52476	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8579900			39134	2104	19219	19301							0.19214573527210632
VLVLDTDYK	9	Unmodified	_VLVLDTDYK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	533.2953979372978	2	533.294965	1064.57538	1.5724	0.00083857	-0.7795	-0.0004157	0.79293	0.00042286	533.2945484896144	37.584	0.76316	37.584	37.313	38.076	0					77	26	4	0	0	0	0.0049178	4	15782	15694;15735;15782;15824		122.18	44.03	1	64553000		+	39135	339	19220	19302	45406;45407;45408;45409	45408					0.04567190037596447
VLVLDTDYK	9	Unmodified	_VLVLDTDYK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	533.2953979372978	2	533.294965	1064.57538	1.6003	0.00085345	-0.5837	-0.00031129	1.0166	0.00054217	533.294634569074	37.044	0.39628	37.349	37.163	37.559	0.30497					49	16	4	0	0	0	0.033102	1	15565	15565		82.529	32.596	1	16671000		+	39136	339	19220	19302	45410	45410					0.04567190037596447
VLVLDTDYK	9	Unmodified	_VLVLDTDYK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.2938720583916	2	533.294965	1064.57538	0.35925	0.00019159	-0.3482	-0.0001857	0.01105	5.8927E-06	533.2946285394224	35.64	0.29428	36.914	36.832	37.126	1.2746					38	21	2	0	0	0	0.043696	2	14965	14965;15004		72.968	23.035	1	7464600		+	39137	339	19220	19302	45411;45412	45411					0.04567190037596447
VLVLDTDYK	9	Unmodified	_VLVLDTDYK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.2955200076103	2	533.294965	1064.57538	1.0396	0.00055439	-1.2264	-0.00065402	-0.18681	-9.9627E-05	533.2942441377692	35.196	0.19174	37.014	36.905	37.097	1.8176					30	17	2	0	0	0	0.1052	1	14755	14755		47.594	13.193	1	8075600		+	39138	339	19220	19302	45413	45413					0.04567190037596447
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.8989440798759	3	398.564056	1192.67034	-0.76628	-0.00030541	0.86084	0.0003431	0.094557	3.7687E-05	398.5646541003952	19.681	0.34659	19.681	19.477	19.823	0					21	10	3	0	0	0	0.40687	1	8147	8147		32.898	20.025	1	2491600		+	39139	339	19221	19303	45414	45414					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.3429443240166	2	597.342446	1192.67034	1.4823	0.00088542	-0.0054855	-3.2767E-06	1.4768	0.00088214	597.3423779070245	26.76	0.44943	26.76	26.564	27.014	0					48	14	5	0	0	0	0.064932	4	11214	11130;11171;11214;11281		90.135	36.302	1	22936000		+	39140	339	19221	19303	45415;45416;45417;45418	45417					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	398.5649291872978	3	398.564056	1192.67034	-0.44478	-0.00017727	1.8038	0.00071894	1.359	0.00054167	398.56500567840084	26.76	1.2995	26.76	26.444	27.744	0					93	42	5	0	0	0	0.074025	2	11210	11160;11210		68.76	31.685	1	76324000		+	39141	339	19221	19303	45419;45420	45420					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.3429443240166	2	597.342446	1192.67034	0.81572	0.00048727	0.50403	0.00030108	1.3198	0.00078835	597.3426453890512	26.269	0.32818	26.531	26.384	26.712	0.26173					28	10	4	0	0	0	0.13822	3	10999	10951;10999;11039		74.2	28.5	1	4458600		+	39142	339	19221	19303	45421;45422;45423	45422					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	398.5645019412041	3	398.564056	1192.67034	1.0031	0.00039979	-0.68784	-0.00027415	0.31522	0.00012564	398.56399704937826	26.26	0.69244	26.522	26.324	27.017	0.26173					49	22	4	0	0	0	0.13822	1	10989	10989		57.204	24.306	1	15949000		+	39143	339	19221	19303	45424	45424					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.3425781130791	2	597.342446	1192.67034	1.3914	0.00083114	0.23208	0.00013863	1.6235	0.00096977	597.3423797620206	25.118	0.29935	26.377	26.227	26.527	1.2594					23	9	4	0	0	0	0.13822	1	10499	10499		57.249	30.981	1	1721700		+	39144	339	19221	19303	45425	45425					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8446533083916	2	597.342446	1192.67034	0.66232	0.00039563	0.70925	0.00042367	1.3716	0.0008193	597.3427500161453	24.781	0.24465	26.465	26.328	26.572	1.6845					16	7	3	0	0	0	0.39144	2	10376	10326;10376		32.037	16.789	1	1555000		+	39145	339	19221	19303	45426;45427	45427					0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	398.564056	1192.67034	0.87172	0.00034744	-0.36326	-0.00014478	0.50846	0.00020265	398.5641995471681	25.098	0.42085	26.357	26.166	26.587	1.2594	-0.16884	-0.00061768	NaN	68.76	38	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7144500		+	39146	339	19221	19303							0.0817112350878233
VLVLDTDYKK	10	Unmodified	_VLVLDTDYKK_					0	0	0		CON__P02754	CON__P02754	CON__P02754	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	398.564056	1192.67034	0.45724	0.00018224	-0.32919	-0.0001312	0.12805	5.1037E-05	398.56406607697676	24.781	0.36504	26.465	26.269	26.634	1.6845	-0.060721	-0.00057694	NaN	68.76	28	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5710800		+	39147	339	19221	19303							0.0817112350878233
VLVLVLLVSP	10	Unmodified	_VLVLVLLVSP_					0	0	0		nc|ENSG00000127838|Q8N490-3|PNKD;PNKD-OLA1|1|fusion	nc|ENSG00000127838|Q8N490-3|PNKD	nc|ENSG00000127838|Q8N490-3|PNKD	MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2427551150322	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.424	1	20.948	20.448	21.448	1.5237								0	0	0	0.66254	1	8072	8072		0.15932	0	1				39148	7866	19222	19304	45428	45428					0.18194411107424457
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2551757693291	3	389.253376	1164.7383	1.0572	0.00041153	1.6635	0.00064751	2.7207	0.001059	389.25439086783496	28.843	0.67502	29.122	28.705	29.38	0.2793					85	21	6	0	0	0	0.89803	1	12083	12083		0.69767	0	1	155380000			39149	6221	19223	19305	45429	45429					0.16252037950130216
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2544738650322	3	389.253376	1164.7383	1.0817	0.00042104	1.3487	0.00052498	2.4303	0.00094602	389.2541690215735	29.295	0.78933	29.574	29.32	30.109	0.2793					99	25	5	0	0	0	0.89803	3	12161	12161;12317;12357		0.69767	0	1	111390000			39150	6221	19223	19305	45430;45431;45432	45430					0.16252037950130216
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	389.2541686892509	3	389.253376	1164.7383	1.2146	0.00047278	0.742	0.00028883	1.9566	0.00076161	389.25365922436606	31.78	0.98593	32.07	31.816	32.802	0.29086					111	31	5	0	0	0	0.89803	1	13393	13393		0.69767	0.69767	1	56743000			39151	6221	19223	19305	45433	45433					0.16252037950130216
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2542907595634	3	389.253376	1164.7383	0.45457	0.00017694	1.7895	0.00069655	2.244	0.00087349	389.2543169535766	27.578	0.46328	28.857	28.565	29.029	1.2789					71	14	6	0	0	0	0.8974	1	11610	11610		1.7423	0.96574	1	118660000			39152	6221	19223	19305	45434	45434					0.16252037950130216
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.2542602419853	3	389.253376	1164.7383	0.41105	0.00016	1.6061	0.00062519	2.0172	0.00078519	389.2542152853662	28.011	0.82339	29.29	29.029	29.852	1.2789					100	26	5	0	0	0	0.89803	2	11649	11649;11832		0.69767	0.42865	1	138770000			39153	6221	19223	19305	45435;45436	45435					0.16252037950130216
VLVLWRLVPA	10	Unmodified	_VLVLWRLVPA_					0	0	0		ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	ENST00000380138.3_1_5:83476291-83680146:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2538940310478	3	389.253376	1164.7383	0.60492	0.00023547	0.65887	0.00025647	1.2638	0.00049194	389.2536565026354	30.03	1.0198	31.845	31.523	32.543	1.8151					98	32	5	0	0	0	0.89803	1	12590	12590		0.69767	0	1	68155000			39154	6221	19223	19305	45437	45437					0.16252037950130216
VLVNDFFLV	9	Unmodified	_VLVNDFFLV_					0	0	0		INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1925536990166	2	533.302593	1064.59063	1.7587	0.00093793	0.81076	0.00043238	2.5695	0.0013703	533.3025072416297	94.668	0.34316	94.668	94.516	94.859	0					18	10	2	0	0	0	0.11463	1	39594	39594		4.3292	2.0265	1	898890			39155	1461;7657	19224	19306	45438	45438					0.06092101625449686
VLVNDFFLV	9	Unmodified	_VLVNDFFLV_					0	0	0		INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1923095583916	2	533.302593	1064.59063	2.7825	0.0014839	0.18995	0.0001013	2.9725	0.0015852	533.3025176648646	94.217	0.34695	94.362	94.133	94.48	0.14494					17	10	2	0	0	0	0.116	1	39416	39416		5.2307	0	1	775440			39156	1461;7657	19224	19306	45439	45439					0.06092101625449686
VLVNDFFLV	9	Unmodified	_VLVNDFFLV_					0	0	0		INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	INADL-EIF3E|1|fusion;ENSG00000104408|ENST00000220849|EIF3E	ENSG00000104408|ENST00000220849|EIF3E	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1921874880791	2	533.302593	1064.59063	3.5114	0.0018726	0.50264	0.00026806	4.014	0.0021407	533.3025167308316	92.874	0.41674	94.151	93.875	94.292	1.277					27	12	3	0	0	0	0.11684	1	39132	39132		4.3292	1.44	1	2231100			39157	1461;7657	19224	19306	45440	45440					0.06092101625449686
VLVNGIRVPI	10	Unmodified	_VLVNGIRVPI_					0	0	0		tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	tr|A0A553SPY7|A0A553SPY7_NIACIAlanineracemaseOS=NialliacirculansOX=1397GN=CEQ21_11595PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3500854372978	2	540.350409	1078.68626	1.6925	0.00091453	-1.634	-0.00088291	0.058519	3.1621E-05	540.3497371189544	93.948	0.34576	93.948	93.773	94.119	0					21	10	3	0	0	0	0.89803	2	39242	39242;39311		1.4819	0.79152	1	1283500			39158	16489	19225	19307	45441;45442	45441					0.15006874536356918
VLVPILLSLV	10	Unmodified	_VLVPILLSLV_					0	0	0		chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1;nc|ENSG00000104951|Q96RQ9-2|IL4I1	chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1	chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	355.0697509646416	3	355.914249	1064.72092	0.5898	0.00020992	2.2945	0.00081664	2.8843	0.0010266	355.91511011137504	25.708	0.33755	25.96	25.797	26.134	0.25197					16	10	2	0	0	0	0.12561	1	10794	10794		0	0	1	330770			39159	231	19226	19308	45443	45443					0.19114697624468135
VLVPILLSLV	10	Unmodified	_VLVPILLSLV_					0	0	0		chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1;ENSG00000104951|ENST00000391826|IL4I1;nc|ENSG00000104951|Q96RQ9-2|IL4I1	chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1	chr19:49895180-49895926|395|18.72|0.37|5.67|-|ENST00000593956|IL4I1,IL4I1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	355.914249	1064.72092	0.16258	5.7864E-05	1.9491	0.0006937	2.1116	0.00075157	355.9150621110317	24.007	0.34252	25.691	25.473	25.815	1.6845	-0.12422	-0.0011225	NaN	0	19	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	445410			39160	231	19226	19308							0.19114697624468135
VLVQDFYII	9	Unmodified	_VLVQDFYII_					0	0	0			REV__ENSG00000102924|ENST00000219197|CBLN1	REV__ENSG00000102924|ENST00000219197|CBLN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3192016482353	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.98	1	101.19	100.69	101.69	0.20527								0	0	0	0.42693	1	42460	42460		1.8442	0	1		+		39161	9090	19227	19309	45444	45444					0.06688370796950949
VLVQDFYII	9	Unmodified	_VLVQDFYII_					0	0	0			REV__ENSG00000102924|ENST00000219197|CBLN1	REV__ENSG00000102924|ENST00000219197|CBLN1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3176757693291	2	555.3157	1108.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.08	1	101.28	100.78	101.78	0.20527								0	0	0	0.42693	1	42499	42499		1.8442	0	1		+		39162	9090	19227	19309	45445	45445					0.06688370796950949
VLVQKLAFQ	9	Unmodified	_VLVQKLAFQ_					0	0	0			REV__ENST00000454158.6_1_4:37614769-37614952:-|nuORF	REV__ENST00000454158.6_1_4:37614769-37614952:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	522.7906371951103	2	523.32386	1044.63317	1.7652	0.00092375	0.80772	0.0004227	2.5729	0.0013464	523.3242223685453	71.644	0.40413	72.986	72.779	73.184	1.3415					33	12	3	0	0	0	0.08828	1	30058	30058		15.847	0	1	9926300	+		39163	13154	19228	19310	45446	45446					0.1126349675369056
VLVQRLREKER	11	Unmodified	_VLVQRLREKER_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-3|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	713.4379150271416	2	713.436067	1424.85758	2.1241	0.0015154	0.3588	0.00025598	2.4829	0.0017714	713.4363280518709	53.212	1.1124	53.212	52.854	53.966	0					111	37	4	0	0	0	0.91768	2	22261	22094;22261		8.7454	0	1	39689000			39164	1219;7840	19229	19311	45447;45448	45448					0.1621457983687833
VLVQRLREKER	11	Unmodified	_VLVQRLREKER_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-3|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	475.9613525271416	3	475.959803	1424.85758	2.3902	0.0011377	0.52053	0.00024775	2.9108	0.0013854	475.9602637532336	53.212	2.1881	53.212	52.821	55.009	0					239	72	6	0	0	0	0.98155	1	22239	22239		2.2527	0	1	350990000			39165	1219;7840	19229	19311	45449	45449					0.1621457983687833
VLVQRLREKER	11	Unmodified	_VLVQRLREKER_					0	0	0		ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-3|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7;nc|ENSG00000099849|Q02833-2|RASSF7	ENSG00000099849|ENST00000397583|RASSF7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4410888552666	2	713.436067	1424.85758	1.6666	0.001189	1.3858	0.00098869	3.0525	0.0021777	713.4370726235239	52.513	0.9479	52.839	52.496	53.444	0.32553					100	31	5	0	0	0	1.0357	1	21909	21909		1.4819	0	1	35978000			39166	1219;7840	19229	19311	45450	45450					0.1621457983687833
VLVQRVHH	8	Unmodified	_VLVQRVHH_					0	0	0			REV__ENSG00000254656|ENST00000649591|RTL1	REV__ENSG00000254656|ENST00000649591|RTL1	MSMS	GG20161007_CRH_Patient100_A02_02	2	494.2968932986259	2	494.295968	986.577383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.02	1	102.08	101.58	102.58	0.062805								0	0	0	1.0178	1	42715	42715		0.79363	0	1		+		39167	11965	19230	19312	45451	45451					0.08355708356748437
VLVQWYLNI	9	Unmodified	_VLVQWYLNI_					0	0	0		ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.3286620974541	2	574.329142	1146.64373	2.0265	0.0011639	-0.70262	-0.00040354	1.3238	0.00076032	574.3281174389089	82.01	0.3694	82.29	82.059	82.428	0.2802					25	11	3	0	0	0	0.3154	1	34261	34261		24.674	0	1	2516300			39168	6830	19231	19313	45452	45452					0.0762747940814279
VLVQWYLNI	9	Unmodified	_VLVQWYLNI_					0	0	0		ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3294555544853	2	574.329142	1146.64373	2.9897	0.0017171	1.5367	0.00088257	4.5264	0.0025997	574.3289969031978	81.032	0.27536	82.265	82.133	82.408	1.2332					20	8	3	0	0	0	0.3154	1	34005	34005		24.674	0	1	2005100			39169	6830	19231	19313	45453	45453					0.0762747940814279
VLVQWYLNI	9	Unmodified	_VLVQWYLNI_					0	0	0		ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	ENST00000482061.6_1_3:155481166-155481211:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3307372927666	2	574.329142	1146.64373	1.8904	0.0010857	1.5916	0.00091412	3.482	0.0019998	574.3298351856306	80.592	0.367	82.287	82.12	82.487	1.6959					21	11	3	0	0	0	0.3154	1	33819	33819		24.674	0	1	1696600			39170	6830	19231	19313	45454	45454					0.0762747940814279
VLVRARLPR	9	Unmodified	_VLVRARLPR_					0	0	0			REV__nc|ENSG00000102539|O43193-2|MLNR	REV__nc|ENSG00000102539|O43193-2|MLNR	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3638793826103	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.708	1	26.392	25.892	26.892	1.6845								0	0	0	0.42693	1	10323	10323		4.3292	0	1		+		39171	9075	19232	19314	45455	45455					0.17252518724626498
VLVRKPSD	8	Unmodified	_VLVRKPSD_					0	0	0			REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	REV__nc|ENSG00000165244|Q7RTV3-2|ZNF367	MSMS	GG20161007_CRH_Patient100_A02_02	2	457.2775451540947	2	457.276909	912.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.44	1	107.49	106.99	107.99	0.052452								0	0	0	1.0178	1	45954	45954		2.5775	0	1		+		39172	10772	19233	19315	45456	45456					0.07949777651424483
VLVRRGGR	8	Unmodified	_VLVRRGGR_					0	0	0			REV__ENST00000540557.1_1_9:38016114-38068223:-|nuORF	REV__ENST00000540557.1_1_9:38016114-38068223:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.8650695681572	3	304.866515	911.577717	-2.9487	-0.00089897	-2.2464	-0.00068487	-5.1952	-0.0015838	304.86570738366015	25.306	0.95262	25.306	24.858	25.811	0					61	30	4	0	0	0	0.89187	2	10445	10445;10496		0.40072	0	1	4970700	+		39173	13779	19234	19316	45457;45458	45457					0.1183912807661045
VLVRRGGR	8	Unmodified	_VLVRRGGR_					0	0	0			REV__ENST00000540557.1_1_9:38016114-38068223:-|nuORF	REV__ENST00000540557.1_1_9:38016114-38068223:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.5369140505791	3	304.866515	911.577717	-2.9487	-0.00089897	-2.2464	-0.00068487	-5.1952	-0.0015838	304.86570738366015	25.306	0.95262	25.306	24.858	25.811	0					61	30	4	0	0	0	2.3239	1	10642	10642		0.40072	0	1	4970700	+		39174	13779	19234	19316	45459	45459					0.1183912807661045
VLVSLRLLWP	10	Unmodified	_VLVSLRLLWP_					0	0	0			REV__ENSG00000221937|ENST00000408947|TAS2R40	REV__ENSG00000221937|ENST00000408947|TAS2R40	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2602416872978	3	399.256898	1194.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.074	1	64.403	63.903	64.903	0.32899								0	0	0	0.66161	1	26845	26845		1.7423	0	1		+		39175	11882	19235	19317	45460	45460					0.15928020604565063
VLVSLRLLWP	10	Unmodified	_VLVSLRLLWP_					0	0	0			REV__ENSG00000221937|ENST00000408947|TAS2R40	REV__ENSG00000221937|ENST00000408947|TAS2R40	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509033083916	3	399.256898	1194.74886	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.193	1	64.522	64.022	65.022	0.32899								0	0	0	0.66161	1	26893	26893		1.7423	0	1		+		39176	11882	19235	19317	45461	45461					0.15928020604565063
VLVSRRKPLK	10	Unmodified	_VLVSRRKPLK_					0	0	0		ENSG00000172497|ENST00000307624|ACOT12	ENSG00000172497|ENST00000307624|ACOT12	ENSG00000172497|ENST00000307624|ACOT12	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2709838747978	3	399.27143	1194.79246	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.88	1	107.04	106.54	107.54	0.15781								0	0	0	0.66254	1	45858	45858		0.15932	0	1				39177	4240	19236	19318	45462	45462					0.20285630101670904
VLVVDPSFEHA	11	Unmodified	_VLVVDPSFEHA_					0	0	0			REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	REV__nc|ENSG00000108840|Q9UQL6-2|HDAC5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2100707888603	2	606.816596	1211.61864	2.0602	0.0012502	2.6339	0.0015983	4.6941	0.0028484	606.8181715377136	72.665	0.38058	72.665	72.46	72.84	0					27	11	3	0	0	0	0.14606	1	30185	30185		3.2813	0.97858	1	3225500	+		39178	9264	19237	19319	45463	45463					0.02129379814891763
VLVWAVLFLYT	11	Unmodified	_VLVWAVLFLYT_					0	0	0		tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.9292480349541	3	441.928558	1322.76385	2.0721	0.00091572	-1.1496	-0.00050805	0.92248	0.00040767	441.927720242359	38.759	0.59751	39.067	38.888	39.485	0.30857					37	19	2	0	0	0	1.039	1	16441	16441		0.45452	0	1	871910			39179	16269	19238	19320	45464	45464					0.11537467681887392
VLVWAVLFLYT	11	Unmodified	_VLVWAVLFLYT_					0	0	0		tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	tr|A0A553SK57|A0A553SK57_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_18105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	331.6978942751884	4	331.698238	1322.76385	0.19209	6.3717E-05	-1.1755	-0.0003899	-0.98338	-0.00032619	331.69784699304955	37.419	0.37661	39.239	39.078	39.455	1.8202					35	13	3	0	0	0	1.0365	1	15680	15680		1.2148	0.20126	1	4260800			39180	16269	19238	19320	45465	45465					0.11537467681887392
VLWDRTFSL	9	Unmodified	_VLWDRTFSL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8092529177666	2	568.808574	1135.60259	1.3841	0.0007873	0.17931	0.00010199	1.5634	0.00088929	568.8086847303058	67.742	0.69257	67.742	67.288	67.98	0					56	21	4	0	0	0	0.032536	4	28191	28143;28191;28230;28274		83.429	47.302	1	16025000			39181	1917	19239	19321	45466;45467;45468;45469	45467					0.04021718368676375
VLWDRTFSL	9	Unmodified	_VLWDRTFSL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8093139529228	2	568.808574	1135.60259	1.6771	0.00095396	-0.86384	-0.00049136	0.81328	0.0004626	568.8079959273359	67.165	0.74335	67.487	67.062	67.805	0.32269					60	24	4	0	0	0	0.032536	3	28158	28108;28158;28203		83.429	28.655	1	22428000			39182	1917	19239	19321	45470;45471;45472	45471					0.04021718368676375
VLWDRTFSL	9	Unmodified	_VLWDRTFSL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8099243044853	2	568.808574	1135.60259	2.1633	0.0012305	-0.032728	-1.8616E-05	2.1306	0.0012119	568.8080804160415	65.956	0.45367	67.355	67.152	67.606	1.3989					35	14	3	0	0	0	0.042285	4	27629	27609;27629;27679;27736		74.2	28.5	1	22792000			39183	1917	19239	19321	45473;45474;45475;45476	45474					0.04021718368676375
VLWDRTFSL	9	Unmodified	_VLWDRTFSL_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8093139529228	2	568.808574	1135.60259	1.8092	0.0010291	0.49594	0.00028209	2.3052	0.0013112	568.8083772213287	65.502	0.76579	67.41	66.969	67.735	1.9085					61	24	4	0	0	0	0.019071	3	27480	27435;27480;27520		100.09	42.619	1	18839000			39184	1917	19239	19321	45477;45478;45479	45478					0.04021718368676375
VLWDRTFSLF	10	Unmodified	_VLWDRTFSLF_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	642.3442870974541	2	642.342781	1282.67101	2.679	0.0017208	-0.18229	-0.00011709	2.4967	0.0016037	642.342702196992	84.357	0.43981	84.357	84.182	84.622	0					32	13	3	0	0	0	0.35511	2	35171	35125;35171		47.732	14.946	1	2623800			39185	1917	19240	19322	45480;45481	45481					0.04097962948503664
VLWDRTFSLF	10	Unmodified	_VLWDRTFSLF_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	642.3422729372978	2	642.342781	1282.67101	2.3204	0.0014905	-0.71317	-0.0004581	1.6072	0.0010324	642.3420201284121	83.784	0.39568	84.054	83.894	84.29	0.27029					32	12	3	0	0	0	0.35511	1	35065	35065		47.732	14.946	1	3373900			39186	1917	19240	19322	45482	45482					0.04097962948503664
VLWDRTFSLF	10	Unmodified	_VLWDRTFSLF_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3453857302666	2	642.342781	1282.67101	2.4587	0.0015794	-0.22546	-0.00014482	2.2333	0.0014345	642.3427673759348	82.901	0.36626	84.114	83.92	84.286	1.2125					36	11	4	0	0	0	0.2157	2	34767	34767;34819		61.09	22.914	1	2594900			39187	1917	19240	19322	45483;45484	45483					0.04097962948503664
VLWDRTFSLF	10	Unmodified	_VLWDRTFSLF_					0	0	0		nc|ENSG00000115415|P42224-2|STAT1;ENSG00000115415|ENST00000361099|STAT1	nc|ENSG00000115415|P42224-2|STAT1	nc|ENSG00000115415|P42224-2|STAT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.3450805544853	2	642.342781	1282.67101	2.9184	0.0018746	0.11132	7.1508E-05	3.0297	0.0019461	642.3439517620317	82.427	0.28157	84.097	83.923	84.205	1.67					28	8	4	0	0	0	0.1864	1	34550	34550		57.108	18.932	1	2937600			39188	1917	19240	19322	45485	45485					0.04097962948503664
VLWEKILIF	9	Unmodified	_VLWEKILIF_					0	0	0			REV__ENST00000443213.5_1_2:38976634-38976703:-|nuORF	REV__ENST00000443213.5_1_2:38976634-38976703:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.8587524294853	2	580.857535	1159.70052	4.6237	0.0026857	0.51942	0.00030171	5.1432	0.0029874	580.8577617445029	87.641	0.38156	89.137	88.951	89.333	1.4953					26	11	3	0	0	0	0.086433	1	36975	36975		53.833	2.203	1	2408500	+		39189	13094	19241	19323	45486	45486					0.12705526964646197
VLWEKILIF	9	Unmodified	_VLWEKILIF_					0	0	0			REV__ENST00000443213.5_1_2:38976634-38976703:-|nuORF	REV__ENST00000443213.5_1_2:38976634-38976703:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	580.857535	1159.70052	2.3347	0.0013561	1.2454	0.00072339	3.58	0.0020795	580.8580988070815	89.637	0.34512	89.637	89.464	89.809	0	0.32854	0.0007796	NaN	53.833	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	674680	+		39190	13094	19241	19323							0.12705526964646197
VLWGETVHL	9	Unmodified	_VLWGETVHL_					0	0	0		ENST00000430603.1_1_10:30728116-30739489:+|nuORF;nc|ENSG00000107968|P41279-2|MAP3K8;ENSG00000107968|ENST00000263056|MAP3K8	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.2933837771416	2	527.290017	1052.56548	2.1081	0.0011116	2.5855	0.0013633	4.6936	0.0024749	527.2915785808748	58.739	0.2544	58.739	58.623	58.877	0					15	7	3	0	0	0	0.15478	1	24505	24505		38.151	12.752	1	1282200			39191	1617	19242	19324	45487	45487					0.04130046822888289
VLWGETVHL	9	Unmodified	_VLWGETVHL_					0	0	0		ENST00000430603.1_1_10:30728116-30739489:+|nuORF;nc|ENSG00000107968|P41279-2|MAP3K8;ENSG00000107968|ENST00000263056|MAP3K8	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.2932617068291	2	527.290017	1052.56548	2.5894	0.0013654	1.63	0.00085948	4.2194	0.0022249	527.2912726649566	58.23	0.28702	58.553	58.364	58.651	0.32298					14	8	2	0	0	0	0.1735	1	24394	24394		36.044	12.024	1	1124000			39192	1617	19242	19324	45488	45488					0.04130046822888289
VLWGETVHL	9	Unmodified	_VLWGETVHL_					0	0	0		ENST00000430603.1_1_10:30728116-30739489:+|nuORF;nc|ENSG00000107968|P41279-2|MAP3K8;ENSG00000107968|ENST00000263056|MAP3K8	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2886840701103	2	527.290017	1052.56548	1.7604	0.00092822	-3.4183	-0.0018024	-1.658	-0.00087422	527.2881530984779	57.028	0.3932	58.442	58.214	58.607	1.4145					28	12	3	0	0	0	0.061246	2	23883	23883;23937		63.563	31.257	1	5409500			39193	1617	19242	19324	45489;45490	45489					0.04130046822888289
VLWGETVHL	9	Unmodified	_VLWGETVHL_					0	0	0		ENST00000430603.1_1_10:30728116-30739489:+|nuORF;nc|ENSG00000107968|P41279-2|MAP3K8;ENSG00000107968|ENST00000263056|MAP3K8	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	ENST00000430603.1_1_10:30728116-30739489:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2907592654228	2	527.290017	1052.56548	1.1284	0.00059501	-3.1937	-0.001684	-2.0652	-0.001089	527.2886968564171	56.444	0.45461	58.412	58.149	58.603	1.9684					35	14	3	0	0	0	0.087207	2	23707	23652;23707		53.576	25.947	1	3953400			39194	1617	19242	19324	45491;45492	45492					0.04130046822888289
VLWHLPAVPA	10	Unmodified	_VLWHLPAVPA_					0	0	0		nc|ENSG00000175505|Q9UBD9-2|CLCF1;ENSG00000175505|ENST00000312438|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	551.8265258669853	2	551.824027	1101.6335	2.9492	0.0016274	2.399	0.0013238	5.3482	0.0029512	551.8249365539796	64.752	0.52353	66.159	65.833	66.356	1.4071					30	16	2	0	0	0	0.76954	1	27163	27163		24.674	8.8267	1	3215400			39195	4377	19243	19325	45493	45493					0.08674916473569283
VLWHLPAVPA	10	Unmodified	_VLWHLPAVPA_					0	0	0		nc|ENSG00000175505|Q9UBD9-2|CLCF1;ENSG00000175505|ENST00000312438|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	nc|ENSG00000175505|Q9UBD9-2|CLCF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	551.8260375857353	2	551.824027	1101.6335	2.4948	0.0013767	2.3182	0.0012792	4.8129	0.0026559	551.8248398407453	64.25	0.52969	66.178	65.827	66.356	1.928					29	16	2	0	0	0	0.81347	1	26967	26967		18.135	3.5533	1	2387000			39196	4377	19243	19325	45494	45494					0.08674916473569283
VLWKEILFL	9	Unmodified	_VLWKEILFL_					0	0	0		ENSG00000125734|ENST00000264080|GPR108	ENSG00000125734|ENST00000264080|GPR108	ENSG00000125734|ENST00000264080|GPR108	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.8599731326103	2	580.857535	1159.70052	5.237	0.0030419	-0.13855	-8.0476E-05	5.0984	0.0029615	580.857541009562	88.14	0.4156	89.197	88.985	89.401	1.0562					28	12	3	0	0	0	0.099302	2	37132	37132;37186		49.554	9.1057	1	2601300			39197	2274	19244	19326	45495;45496	45495					0.12705526964646197
VLWLFFVV	8	Unmodified	_VLWLFFVV_					0	0	0		nc|ENSG00000070729|Q14028-2|CNGB1;nc|ENSG00000070729|Q14028-4|CNGB1;ENSG00000070729|ENST00000251102|CNGB1	nc|ENSG00000070729|Q14028-2|CNGB1	nc|ENSG00000070729|Q14028-2|CNGB1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	512.2156860232353	2	511.807314	1021.60008	3.1088	0.0015911	2.9086	0.0014886	6.0174	0.0030798	511.8088815460995	84.822	0.26952	86.419	86.219	86.488	1.5962					14	8	2	0	0	0	2.3239	1	35495	35495		6.3541	0	1	1354400			39198	859	19245	19327	45497	45497					0.09013914701665726
VLWVIGYAL	9	Unmodified	_VLWVIGYAL_					0	0	0		tr|A0A553SQ98|A0A553SQ98_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_23590PE=4SV=1	tr|A0A553SQ98|A0A553SQ98_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_23590PE=4SV=1	tr|A0A553SQ98|A0A553SQ98_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_23590PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.2938110232353	2	517.307678	1032.6008	2.1458	0.00111	-3.6243	-0.0018749	-1.4786	-0.00076487	517.305459440214	43.619	0.39661	44.972	44.735	45.132	1.3536					33	12	4	0	0	0	0.099861	1	18354	18354		14.582	0	1	12397000			39199	16507	19246	19328	45498	45498					0.08580709350690086
VLWVLLFH	8	Unmodified	_VLWVLLFH_					0	0	0			REV__nc|ENSG00000143921|Q9H221-2|ABCG8	REV__nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8754760622978	3	342.876018	1025.60622	-1.7076	-0.0005855	-0.052901	-1.8138E-05	-1.7605	-0.00060363	342.8758837311366	34.585	0.49891	34.585	34.37	34.869	0					50	15	4	0	0	0	0.89124	1	14546	14546		1.8442	1.8442	1	9353600	+		39200	10228	19247	19329	45499	45499					0.0944443293317363
VLWVLLFH	8	Unmodified	_VLWVLLFH_					0	0	0			REV__nc|ENSG00000143921|Q9H221-2|ABCG8	REV__nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2094909548759	3	342.876018	1025.60622	-0.89695	-0.00030754	-2.0054	-0.00068759	-2.9023	-0.00099513	342.8752400954134	34.925	0.46817	36.2	35.962	36.43	1.2746					64	44	2	0	0	0	0.8873	1	14600	14600		4.3292	0.73274	1	13272000	+		39201	10228	19247	19329	45500	45500					0.0944443293317363
VLWVLLFH	8	Unmodified	_VLWVLLFH_					0	0	0			REV__nc|ENSG00000143921|Q9H221-2|ABCG8	REV__nc|ENSG00000143921|Q9H221-2|ABCG8	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	343.2094909548759	3	342.876018	1025.60622	-0.89695	-0.00030754	-2.0054	-0.00068759	-2.9023	-0.00099513	342.8752400954134	34.925	0.46817	36.2	35.962	36.43	1.2746					64	44	2	0	0	0	2.3239	1	14600	14600		4.3292	0.73274	1	13272000	+		39202	10228	19247	19329	45501	45501					0.0944443293317363
VLWVNRPQRR	10	Unmodified	_VLWVNRPQRR_					0	0	0		ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.6983215212822	4	331.699369	1322.76837	-1.8961	-0.00062893	-0.65525	-0.00021735	-2.5513	-0.00084627	331.6992045128168	40.349	0.41386	40.349	40.106	40.52	0					40	12	4	0	0	0	0.88031	1	16880	16880		3.5871	1.8448	1	3222300			39203	5134	19248	19330	45502	45502					0.11989789667995865
VLWVNRPQRR	10	Unmodified	_VLWVNRPQRR_					0	0	0		ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	ENSG00000204345|ENST00000375352|CD300LD	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		4	331.699369	1322.76837	1.0845	0.00035973	-2.3476	-0.00077868	-1.263	-0.00041895	331.69860075708647	40.026	0.40287	40.338	40.136	40.539	0.31263	-0.005238	-0.0010437	NaN	3.5871	39	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3462700			39204	5134	19248	19330							0.11989789667995865
VLWWRKKHP	9	Unmodified	_VLWWRKKHP_					0	0	0		nc|ENSG00000078269|O15056-3|SYNJ2;nc|ENSG00000078269|O15056-2|SYNJ2;ENSG00000078269|ENST00000355585|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	nc|ENSG00000078269|O15056-3|SYNJ2	MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2492553591728	3	417.248737	1248.72438	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.35	1	103.41	102.91	103.91	0.059502								0	0	0	0.42693	1	43335	43335		1.0715	0.29493	1				39205	975	19249	19331	45503	45503					0.1099680524168889
VLYCALPILV	10	Unmodified	_VLYCALPILV_					0	0	0			REV__ENSG00000111432|ENST00000229030|FZD10	REV__ENSG00000111432|ENST00000229030|FZD10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	552.3321411013603	2	552.330296	1102.64604	2.5213	0.0013926	-4.2818	-0.002365	-1.7605	-0.00097239	552.3291826251985	84.91	0.41351	85.171	84.918	85.332	0.26083					18	12	2	0	0	0	0.12425	1	35523	35523		7.9102	0	1	741660	+		39206	9329	19250	19332	45504	45504					0.09882191821566266
VLYCALPILV	10	Unmodified	_VLYCALPILV_					0	0	0			REV__ENSG00000111432|ENST00000229030|FZD10	REV__ENSG00000111432|ENST00000229030|FZD10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	552.330296	1102.64604	1.2722	0.0007027	-7.0534	-0.0038958	-5.7812	-0.0031931	552.3263237015566	83.974	0.32544	85.162	84.954	85.28	1.1879	0.0037049	-0.00027883	NaN	7.9102	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2972800	+		39207	9329	19250	19332							0.09882191821566266
VLYEKDIQLF	10	Unmodified	_VLYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	634.3523437380791	2	634.350271	1266.68599	2.4402	0.001548	0.7341	0.00046567	3.1743	0.0020136	634.3510704177434	60.886	0.31275	60.886	60.701	61.014	0					20	9	3	0	0	0	0.42124	1	25381	25381		32.037	3.5506	1	879170			39208	3939	19251	19333	45505	45505					0.06331410025836703
VLYEKDIQLF	10	Unmodified	_VLYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	634.3517944216728	2	634.350271	1266.68599	2.1451	0.0013608	2.0488	0.0012996	4.1939	0.0026604	634.3515107772599	60.277	0.31716	60.605	60.442	60.759	0.32809					20	9	3	0	0	0	0.19554	2	25246	25246;25302		49.527	9.288	1	1069300			39209	3939	19251	19333	45506;45507	45506					0.06331410025836703
VLYEKDIQLF	10	Unmodified	_VLYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3521606326103	2	634.350271	1266.68599	1.8665	0.001184	0.20898	0.00013256	2.0754	0.0013166	634.3503379884672	59.051	0.2668	60.471	60.35	60.617	1.4196					16	8	2	0	0	0	0.043952	2	24746	24746;24797		82.529	24.807	1	2162900			39210	3939	19251	19333	45508;45509	45508					0.06331410025836703
VLYEKDIQLF	10	Unmodified	_VLYEKDIQLF_					0	0	0		ENSG00000166971|ENST00000394657|AKTIP;nc|ENSG00000166971|Q9H8T0-2|AKTIP;ENST00000514047.1_1_5:24171013-24171163:+|nuORF	ENSG00000166971|ENST00000394657|AKTIP	ENSG00000166971|ENST00000394657|AKTIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.8528320193291	2	634.350271	1266.68599	1.4459	0.00091721	-0.28408	-0.00018021	1.1618	0.000737	634.3500381374284	58.592	0.2619	60.561	60.401	60.663	1.969					14	8	2	0	0	0	0.1353	1	24573	24573		57.722	12.022	1	1927700			39211	3939	19251	19333	45510	45510					0.06331410025836703
VLYKYVTCWL	10	Unmodified	_VLYKYVTCWL_					0	0	0		ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	644.3458740115166	2	644.343935	1286.67332	2.6466	0.0017053	0.040818	2.6301E-05	2.6874	0.0017316	644.8457841758501	69.707	0.25147	71.545	71.405	71.656	1.8388					10	7	2	0	0	0	0.81324	1	29272	29272		10.824	0.75	1	413930			39212	1750	19252	19334	45511	45511					0.04144675361953887
VLYKYVTCWL	10	Unmodified	_VLYKYVTCWL_					0	0	0		ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	644.343935	1286.67332	2.5022	0.0016123	-4.368	-0.0028145	-1.8658	-0.0012022	644.340742145339	70.183	0.22143	71.537	71.491	71.712	1.3536	-0.004417	-0.0018741	NaN	10.824	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	374980			39213	1750	19252	19334							0.04144675361953887
VLYQLVTGV	9	Unmodified	_VLYQLVTGV_					0	0	0			REV__tr|A0A7D6VUW8|A0A7D6VUW8_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08660PE=3SV=1	REV__tr|A0A7D6VUW8|A0A7D6VUW8_9CLOTROKfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08660PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	495.9172546267509	2	496.294768	990.574983	1.4276	0.00070852	0.45977	0.00022818	1.8874	0.0009367	496.29458492994485	41.299	0.12944	41.299	41.209	41.338	0					5	3	2	0	0	0	0.11071	1	17297	17297		10.824	0.75	1	193790	+		39214	15520	19253	19335	45512	45512					0.07931815108440787
VLYRVALAI	9	Unmodified	_VLYRVALAI_					0	0	0		nc|ENSG00000162065|Q9ULP9-2|TBC1D24;ENSG00000162065|ENST00000646147|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	nc|ENSG00000162065|Q9ULP9-2|TBC1D24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3277770876884	2	509.326402	1016.63825	1.874	0.0009545	-0.79367	-0.00040424	1.0804	0.00055026	509.3257880139376	71.272	0.6012	71.272	71.067	71.668	0					56	18	4	0	0	0	0.66839	1	29628	29628		8.5933	0	1	18799000			39215	3604	19254	19336	45513	45513					0.13059800616315442
VLYVPGDPF	9	Unmodified	_VLYVPGDPF_					0	0	0		ENST00000472559.5_1_20:33894565-33894598:-|nuORF	ENST00000472559.5_1_20:33894565-33894598:-|nuORF	ENST00000472559.5_1_20:33894565-33894598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.531054675579	1	1006.52441	1005.51713	3.1282	0.0031486	3.2109	0.0032319	6.3391	0.0063805	1006.5272098632297	64.288	0.39881	65.695	65.466	65.865	1.4071					31	12	3	0	0	0	0.41943	1	27007	27007		19.439	1.304	1	4297700			39216	6756	19255	19337	45514	45514					0.014595531830082109
VLYWKWLLLWM	11	Unmodified	_VLYWKWLLLWM_					0	0	0		ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6256591677666	3	517.624593	1549.85195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.35	1	113.39	112.89	113.89	0.044189								0	0	0	0.63775	1	48824	48824		0.45452	0.35968	1				39217	5575	19256	19338	45515	45515					0.09901765000859086
VLYWKWLLLWM	11	Unmodified	_VLYWKWLLLWM_					0	0	0		ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6256591677666	3	517.624593	1549.85195	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.89	1	113.94	113.44	114.44	0.044189								0	0	0	0.63775	1	49043	49043		0.40827	0.31342	1				39218	5575	19256	19338	45516	45516					0.09901765000859086
VLYWKWLLLWM	11	Unmodified	_VLYWKWLLLWM_					0	0	0		ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	ENST00000245046.6_1_3:10004387-10004693:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	518.2741577029228	3	517.624593	1549.85195	3.3967	0.0017582	0.7344	0.00038014	4.1311	0.0021384	517.6255461656086	80.919	4.3438	82.152	80.406	84.75	1.2332					189	139	2	0	0	0	0.14606	1	34208	34208		1.4551	0	1	1178000			39219	5575	19256	19338	45517	45517					0.09901765000859086
VMADIRELI	9	Unmodified	_VMADIRELI_					0	0	0		nc|ENSG00000111231|Q9UHW5-3|GPN3;ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3	nc|ENSG00000111231|Q9UHW5-3|GPN3	nc|ENSG00000111231|Q9UHW5-3|GPN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2983276247978	2	530.296985	1058.57942	3.2545	0.0017258	-2.1085	-0.0011181	1.146	0.00060773	530.2968010522528	60.702	0.50556	62.122	61.871	62.377	1.4196					34	15	3	0	0	0	0.19659	2	25537	25490;25537		33.445	16.43	1	1855600			39220	7853	19257	19339	45518;45519	45519					0.05246956259702529
VMADIRELI	9	Unmodified	_VMADIRELI_					0	0	0		nc|ENSG00000111231|Q9UHW5-3|GPN3;ENSG00000111231|ENST00000228827|GPN3;nc|ENSG00000111231|Q9UHW5-2|GPN3	nc|ENSG00000111231|Q9UHW5-3|GPN3	nc|ENSG00000111231|Q9UHW5-3|GPN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2992431521416	2	530.296985	1058.57942	3.4577	0.0018336	-0.050786	-2.6932E-05	3.407	0.0018067	530.296678084436	60.282	0.28207	62.247	62.105	62.387	1.9653					19	8	3	0	0	0	0.18337	1	25303	25303		34.932	8.6639	1	2167500			39221	7853	19257	19339	45520	45520					0.05246956259702529
VMAPRTVLL	9	Unmodified	_VMAPRTVLL_					0	0	0		ENSG00000234745|ENST00000412585|HLA-B;ENST00000498007.1_1_6:31324459-31324935:-|nuORF;ENST00000434333.1_1_6:31324722-31324935:-|nuORF	ENSG00000234745|ENST00000412585|HLA-B	ENSG00000234745|ENST00000412585|HLA-B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3057128787041	2	500.304613	998.594672	2.054	0.0010276	1.2555	0.00062812	3.3094	0.0016557	500.30497217986164	44.139	0.31437	46.083	45.893	46.208	1.9438					21	9	3	0	0	0	0.35391	1	18479	18479		22.736	1.8651	1	1982800			39222	5313	19258	19340	45521	45521					0.09531867847545072
VMDFTSSLL	9	Unmodified	_VMDFTSSLL_					0	0	0		ENST00000462279.5_1_5:60194137-60194212:-|nuORF	ENST00000462279.5_1_5:60194137-60194212:-|nuORF	ENST00000462279.5_1_5:60194137-60194212:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7566406130791	2	506.754618	1011.49468	2.2893	0.0011601	3.3479	0.0016966	5.6372	0.0028567	506.7562269464156	84.669	0.34126	85.828	85.622	85.964	1.159					25	10	3	0	0	0	0.34572	1	35561	35561		23.148	0	1	5084800			39223	6678	19259	19341	45522	45522					-0.010604142769125247
VMDFTSSLL	9	Unmodified	_VMDFTSSLL_					0	0	0		ENST00000462279.5_1_5:60194137-60194212:-|nuORF	ENST00000462279.5_1_5:60194137-60194212:-|nuORF	ENST00000462279.5_1_5:60194137-60194212:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7584716677666	2	506.754618	1011.49468	2.2006	0.0011151	3.3071	0.0016759	5.5076	0.002791	506.75609004084777	84.158	0.45354	85.796	85.59	86.044	1.6379					28	14	3	0	0	0	0.34572	2	35274	35274;35328		23.148	0	1	4482500			39224	6678	19259	19341	45523;45524	45523					-0.010604142769125247
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.7845031619072	2	509.78371	1017.55287	1.5777	0.0008043	0.51278	0.0002614	2.0905	0.0010657	509.78426987640484	31.649	0.34806	31.649	31.473	31.821	0					23	10	3	0	0	0	0.046715	2	13244	13244;13292		70.332	26.56	1	3234000			39225	1847	19260	19342	45525;45526	45525					0.044792673683673456
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.7854492068291	2	509.78371	1017.55287	1.3707	0.00069877	0.72201	0.00036807	2.0927	0.0010668	509.78430052278947	31.265	0.33303	31.556	31.358	31.691	0.29086					27	10	4	0	0	0	0.042285	2	13105	13105;13152		74.2	30.427	1	3489800			39226	1847	19260	19342	45527;45528	45527					0.044792673683673456
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7851135134697	2	509.78371	1017.55287	1.1753	0.00059917	0.97968	0.00049942	2.155	0.0010986	509.78426877790366	30.069	0.33808	31.352	31.164	31.502	1.2825					34	10	4	0	0	0	0.0070766	3	12612	12569;12612;12653		114.19	35.458	1	13378000			39227	1847	19260	19342	45529;45530;45531	45530					0.044792673683673456
VMDSKIVQV	9	Unmodified	_VMDSKIVQV_					0	0	0		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7841674685478	2	509.78371	1017.55287	1.058	0.00053935	0.11776	6.0035E-05	1.1758	0.00059938	509.7838899640569	29.631	0.3037	31.429	31.264	31.568	1.7987					30	9	4	0	0	0	0.0025633	2	12421	12379;12421		128.93	39.979	1	13545000			39228	1847	19260	19342	45532;45533	45533					0.044792673683673456
VMDSKIVQV	9	Oxidation (M)	_VM(Oxidation (M))DSKIVQV_		VM(1)DSKIVQV		VM(57)DSKIVQV	0	0	1		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7819091677666	2	517.781167	1033.54778	1.2988	0.00067247	0.32142	0.00016643	1.6202	0.0008389	517.781519917733	22.073	0.61792	23.25	23.081	23.699	1.177					34	19	3	0	0	0	0.077188	2	9205	9205;9258		57.249	21.719	1	2191500			39229	1847	19260	19343	45534;45535	45534		31			0.03234963505747146
VMDSKIVQV	9	Oxidation (M)	_VM(Oxidation (M))DSKIVQV_		VM(1)DSKIVQV		VM(50)DSKIVQV	0	0	1		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7819091677666	2	517.781167	1033.54778	0.62021	0.00032114	1.5375	0.00079609	2.1577	0.0011172	517.7810929123162	21.681	0.40518	23.297	23.05	23.455	1.6158					27	13	3	0	0	0	0.099383	1	9045	9045		49.527	18.891	1	2147800			39230	1847	19260	19343	45536	45536		31			0.03234963505747146
VMDSKIVQV	9	Oxidation (M)	_VM(Oxidation (M))DSKIVQV_					0	0	1		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	517.781167	1033.54778	1.2023	0.00062253	2.9829	0.0015445	4.1852	0.002167	517.7823555417019	23.174	0.30463	23.174	22.986	23.291	0	-0.057715	0.0017372	NaN	57.249	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	927540			39231	1847	19260	19343				31			0.03234963505747146
VMDSKIVQV	9	Oxidation (M)	_VM(Oxidation (M))DSKIVQV_					0	0	1		ENSG00000114030|ENST00000344337|KPNA1;KPNA6|p.E517Dfs*11|1|0.17|ENSG00000025800|chr1:32170833-32170834|AA/-|frameshift_variant;ENSG00000025800|ENST00000373625|KPNA6;ENSG00000196911|ENST00000368564|KPNA5;KHDRBS1-KPNA6|1|fusion	ENSG00000114030|ENST00000344337|KPNA1	ENSG00000114030|ENST00000344337|KPNA1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	517.781167	1033.54778	0.90748	0.00046988	1.7992	0.00093162	2.7067	0.0014015	517.7822074588736	22.972	0.31332	23.205	23.096	23.409	0.23306	-0.026439	0.00051143	NaN	57.249	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	555400			39232	1847	19260	19343				31			0.03234963505747146
VMDVLNNKL	9	Unmodified	_VMDVLNNKL_					0	0	0		tr|A0A553SLV8|A0A553SLV8_NIACITIGR03943familyproteinOS=NialliacirculansOX=1397GN=CEQ21_21450PE=4SV=1	tr|A0A553SLV8|A0A553SLV8_NIACITIGR03943familyproteinOS=NialliacirculansOX=1397GN=CEQ21_21450PE=4SV=1	tr|A0A553SLV8|A0A553SLV8_NIACITIGR03943familyproteinOS=NialliacirculansOX=1397GN=CEQ21_21450PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7908203005791	2	523.289159	1044.56377	2.9498	0.0015436	-2.9592	-0.0015485	-0.0094587	-4.9496E-06	523.2879082324351	73.817	1.0536	75.613	75.317	76.371	1.7962					118	33	5	0	0	0	0.5697	1	31155	31155		12.532	0	1	45703000			39233	16358	19261	19344	45537	45537					0.043266697426361134
VMESGVLLA	9	Unmodified	_VMESGVLLA_					0	0	0		ENSG00000176239|ENST00000380219|OR51B6	ENSG00000176239|ENST00000380219|OR51B6	ENSG00000176239|ENST00000380219|OR51B6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	918.4990722537041	1	918.496481	917.489204	2.2986	0.0021113	0.14907	0.00013692	2.4477	0.0022482	918.4967750537808	68.057	0.40063	69.927	69.704	70.105	1.87					28	12	3	0	0	0	0.1735	1	28517	28517		36.044	0	1	2269200			39234	4401	19262	19345	45538	45538					0.027159069312801876
VMFGGKQVVV	10	Unmodified	_VMFGGKQVVV_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.3036987185478	2	532.30207	1062.58959	2.3872	0.0012707	0.34455	0.00018341	2.7318	0.0014541	532.3023560596062	40.839	0.40774	42.164	41.991	42.399	1.3254					37	12	4	0	0	0	0.043055	1	17117	17117		81.89	45.763	1	8567400			39235	4049	19263	19346	45539	45539					0.06079563984917513
VMFGGKQVVV	10	Unmodified	_VMFGGKQVVV_					0	0	0		nc|ENSG00000168710|O43865-2|AHCYL1;ENSG00000168710|ENST00000369799|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	nc|ENSG00000168710|O43865-2|AHCYL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.3026611208916	2	532.30207	1062.58959	2.3632	0.001258	-0.47409	-0.00025236	1.8891	0.0010056	532.3017636885702	40.449	0.43455	42.312	42.114	42.548	1.8624					38	13	4	0	0	0	0.092962	1	16937	16937		65.235	39.836	1	9131700			39236	4049	19263	19346	45540	45540					0.06079563984917513
VMFKEPVEV	9	Unmodified	_VMFKEPVEV_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2894164919853	2	539.286085	1076.55762	2.1476	0.0011582	2.2322	0.0012038	4.3798	0.002362	539.2892026153108	41.965	0.42651	43.305	43.05	43.476	1.3399					22	13	3	0	0	0	0.13623	1	17614	17614		40.239	11.752	1	1813400			39237	2566	19264	19347	45541	45541					0.022401515111141634
VMFKEPVEV	9	Unmodified	_VMFKEPVEV_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MSMS	GG20161007_CRH_Patient100_W632_01	3	539.2853271365166	2	539.286085	1076.55762	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.898	1	43.238	42.738	43.738	1.3399								0	0	0	0.052043	1	17566	17566		43.982	16.353	1				39238	2566	19264	19347	45542	45542					0.022401515111141634
VMFKEPVEV	9	Unmodified	_VMFKEPVEV_					0	0	0		ENSG00000133243|ENST00000255608|BTBD2;ENST00000589685.2_1_19:1986489-1990887:-|nuORF;nc|ENSG00000133243|Q9BX70-2|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	ENSG00000133243|ENST00000255608|BTBD2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.2894775271416	2	539.286085	1076.55762	1.9881	0.0010722	3.8122	0.0020559	5.8003	0.003128	539.2891227444287	41.439	0.35712	43.331	43.119	43.476	1.8927					15	11	2	0	0	0	0.093582	1	17405	17405		28.495	12.647	1	2121000			39239	2566	19264	19347	45543	45543					0.022401515111141634
VMIPTLLML	9	Unmodified	_VMIPTLLML_					0	0	0			REV__ENSG00000183310|ENST00000328782|OR2T34	REV__ENSG00000183310|ENST00000328782|OR2T34	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2062866091728	3	344.206158	1029.59665	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.563	1	16.389	15.889	16.889	0.82643								0	0	0	0.42693	1	6468	6468		1.1933	0	1		+		39240	11387	19265	19348	45544	45544					0.08303160541117904
VMIPTLLML	9	Unmodified	_VMIPTLLML_					0	0	0			REV__ENSG00000183310|ENST00000328782|OR2T34	REV__ENSG00000183310|ENST00000328782|OR2T34	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2069274783134	3	344.206158	1029.59665	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.898	1	16.937	16.437	17.437	1.0392								0	0	0	0.42693	1	6598	6598		1.1933	0	1		+		39241	11387	19265	19348	45545	45545					0.08303160541117904
VMIPTLLML	9	Unmodified	_VMIPTLLML_					0	0	0			REV__ENSG00000183310|ENST00000328782|OR2T34	REV__ENSG00000183310|ENST00000328782|OR2T34	MSMS	GG20161007_CRH_Patient100_W632_02	4	344.2070190310478	3	344.206158	1029.59665	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.998	1	17.037	16.537	17.537	1.0392								0	0	0	0.42693	1	6640	6640		1.1933	0	1		+		39242	11387	19265	19348	45546	45546					0.08303160541117904
VMITKLVEV	9	Unmodified	_VMITKLVEV_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3151122927666	2	516.312103	1030.60965	0.82696	0.00042697	-0.17761	-9.1701E-05	0.64936	0.00033527	516.3128921485004	51.565	0.25189	53.541	53.398	53.65	1.9753					11	7	2	0	0	0	0.18337	1	21627	21627		34.932	4.2955	1	2096900			39243	745	19266	19349	45547	45547					0.09557314924859384
VMITKLVEV	9	Unmodified	_VMITKLVEV_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.312103	1030.60965	1.9829	0.0010238	1.8968	0.00097935	3.8797	0.0020032	516.3128564231013	53.483	0.25164	53.805	53.631	53.882	0.32283	0.17034	0.00038675	NaN	34.932	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	734070			39244	745	19266	19349							0.09557314924859384
VMITKLVEV	9	Unmodified	_VMITKLVEV_					0	0	0		nc|ENSG00000060656|Q92729-3|PTPRU;ENSG00000060656|ENST00000373779|PTPRU;nc|ENSG00000060656|Q92729-4|PTPRU;nc|ENSG00000060656|Q92729|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	nc|ENSG00000060656|Q92729-3|PTPRU	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	516.312103	1030.60965	1.3119	0.00067733	2.3776	0.0012276	3.6894	0.0019049	516.3120893594336	52.163	0.2566	53.559	53.395	53.652	1.3966	-0.075956	0.0008832	NaN	34.932	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2374800			39245	745	19266	19349							0.09557314924859384
VMKKKKLV	8	Unmodified	_VMKKKKLV_					0	0	0			REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	REV__nc|ENSG00000157212|Q6ZW49-2|PAXIP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3357726931572	2	487.333173	972.651793	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.543	1	22.72	22.22	23.22	1.177								0	0	0	1.0178	1	8996	8996		0.69038	0	1		+		39246	10533	19267	19350	45548	45548					0.16437335123907815
VMKKRKLA	8	Unmodified	_VMKKRKLA_					0	0	0		ENST00000577827.5_1_18:8122082-8296373:+|nuORF;nc|ENSG00000173482|P28827|PTPRM;ENSG00000173482|ENST00000580170|PTPRM	ENST00000577827.5_1_18:8122082-8296373:+|nuORF	ENST00000577827.5_1_18:8122082-8296373:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	487.3224670290947	2	487.320597	972.626641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.91	1	106.07	105.57	106.57	0.15859								0	0	0	1.0178	1	45222	45222		0.69038	0	1				39247	4284	19268	19351	45549	45549					0.13923280321330367
VMKLKQIIP	9	Unmodified	_VMKLKQIIP_					0	0	0		ENST00000597643.5_1_19:17434328-17439993:-|nuORF;nc|ENSG00000074855|Q9HCE9-2|ANO8;ENSG00000074855|ENST00000159087|ANO8	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	ENST00000597643.5_1_19:17434328-17439993:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	357.2312194705009	3	357.231584	1068.67292	0.27141	9.6957E-05	-0.95391	-0.00034077	-0.6825	-0.00024381	357.23119037316195	26.531	0.52027	28.278	28.099	28.619	1.747					20	17	2	0	0	0	0.83213	1	11118	11118		1.0715	0.29493	1	1534900			39248	920	19269	19352	45550	45550					0.141333004327862
VMKLLLLL	8	Unmodified	_VMKLLLLL_					0	0	0			REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	472.6671935915947	2	471.82465	941.634746	3.3129	0.0015631	-0.30212	-0.00014255	3.0108	0.0014206	471.8243074660602	109.58	0.74171	109.74	109.39	110.14	0.15898					56	28	3	0	0	0	2.3239	1	47536	47536		0.69038	0	1	8049600	+		39249	15273	19270	19353	45551	45551					0.16159414518108406
VMKLLLLL	8	Unmodified	_VMKLLLLL_					0	0	0			REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.8264343142509	2	471.82465	941.634746	3.5756	0.001687	-0.73443	-0.00034652	2.8411	0.0013405	471.8239418348225	109.59	0.81469	109.75	109.34	110.15	0.15366					72	31	4	0	0	0	0.89008	3	47607	47496;47555;47607		2.5775	0	1	8526300	+		39250	15273	19270	19353	45552;45553;45554	45554					0.16159414518108406
VMKLLLLL	8	Unmodified	_VMKLLLLL_					0	0	0			REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	REV__tr|A0A553SU12|A0A553SU12_NIACIIsochorismatasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_06105PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	471.3321105837822	2	471.82465	941.634746	3.5756	0.001687	-0.73443	-0.00034652	2.8411	0.0013405	471.8239418348225	109.59	0.81469	109.75	109.34	110.15	0.15366					72	31	4	0	0	0	2.3239	1	47391	47391		0.69038	0	1	8526300	+		39251	15273	19270	19353	45555	45555					0.16159414518108406
VMLDVPIRL	9	Unmodified	_VMLDVPIRL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.3193847537041	2	528.31772	1054.62089	1.7528	0.00092603	0.23361	0.00012342	1.9864	0.0010494	528.3180777587713	71.493	0.25262	71.493	71.352	71.605	0					17	7	3	0	0	0	0.22094	2	29744	29744;29791		32.786	6.6987	1	1651500			39252	929	19271	19354	45556;45557	45556					0.0957613701898481
VMLDVPIRL	9	Unmodified	_VMLDVPIRL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.3188354372978	2	528.31772	1054.62089	1.5776	0.00083347	0.867	0.00045805	2.4446	0.0012915	528.3183823399758	70.816	0.31743	71.14	70.987	71.305	0.32359					22	9	3	0	0	0	0.16434	2	29630	29630;29686		39.95	24.103	1	2064800			39253	929	19271	19354	45558;45559	45558					0.0957613701898481
VMLDVPIRL	9	Unmodified	_VMLDVPIRL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3160278201103	2	528.31772	1054.62089	2.3626	0.0012482	-0.32368	-0.000171	2.039	0.0010772	528.3176661294992	69.597	0.37413	70.963	70.817	71.191	1.3657					32	11	4	0	0	0	0.056421	2	29193	29193;29241		71.922	41.697	1	9782100			39254	929	19271	19354	45560;45561	45560					0.0957613701898481
VMLDVPIRL	9	Unmodified	_VMLDVPIRL_					0	0	0		nc|ENSG00000075391|Q9UJF2|RASAL2;ENSG00000075391|ENST00000367649|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	nc|ENSG00000075391|Q9UJF2|RASAL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3173705935478	2	528.31772	1054.62089	1.4275	0.0007542	-0.069228	-3.6574E-05	1.3583	0.00071762	528.3178553114675	69.051	0.36566	70.903	70.737	71.103	1.853					35	11	4	0	0	0	0.12108	2	28965	28965;29016		45.7	24.163	1	8083300			39255	929	19271	19354	45562;45563	45562					0.0957613701898481
VMLFVLILIA	10	Unmodified	_VMLFVLILIA_					0	0	0		tr|A0A7D7ADJ3|A0A7D7ADJ3_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23085PE=4SV=1	tr|A0A7D7ADJ3|A0A7D7ADJ3_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23085PE=4SV=1	tr|A0A7D7ADJ3|A0A7D7ADJ3_9CLOTTetratricopeptiderepeatproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23085PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3661987185478	2	566.364139	1130.71372	3.2618	0.0018474	0.47172	0.00026717	3.7335	0.0021145	566.3643289992451	105.96	0.17596	106.12	106.03	106.21	0.16674					31	8	5	0	0	0	0.89803	1	45237	45237		0	0	1	607540000			39256	17325	19272	19355	45564	45564					0.15359641752411335
VMLGTQLLYKF	11	Unmodified	_VMLGTQLLYKF_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000525966.1_1_11:14695245-14695548:-|nuORF;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;MORF4L1-PSMA4|1|fusion;MORF4L1-PSMA4|2|fusion	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	656.8713256716728	2	656.870317	1311.72608	3.3033	0.0021699	-1.3245	-0.00086999	1.9789	0.0012999	657.3706419690462	73.333	0.4108	74.658	74.47	74.88	1.3249					26	12	3	0	0	0	0.035876	2	30755	30755;30806		74.2	53.746	1	1982200			39257	2196	19273	19356	45565;45566	45565					0.08268633424768268
VMLGTQLLYKF	11	Unmodified	_VMLGTQLLYKF_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000525966.1_1_11:14695245-14695548:-|nuORF;ENST00000560710.1_1_15:79184565-79186592:+|nuORF;MORF4L1-PSMA4|1|fusion;MORF4L1-PSMA4|2|fusion	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	656.8715698122978	2	656.870317	1311.72608	2.5998	0.0017077	-1.4999	-0.00098525	1.0998	0.00072245	656.8696960958683	72.736	0.34934	74.546	74.385	74.734	1.8101					25	10	3	0	0	0	0.028056	1	30518	30518		81.915	61.501	1	1864000			39258	2196	19273	19356	45567	45567					0.08268633424768268
VMLHLILR	8	Unmodified	_VMLHLILR_					0	0	0			REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	497.8186828494072	2	497.815147	993.615742	3.3689	0.0016771	3.0012	0.001494	6.3701	0.0031712	497.81666094178166	107.69	0.18265	107.74	107.64	107.82	0.052452					27	9	4	0	0	0	0.89176	1	46103	46103		0.79363	0.10326	1	115300000	+		39259	12365	19274	19357	45568	45568					0.11867877947065608
VMLHLILR	8	Unmodified	_VMLHLILR_					0	0	0			REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	REV__ENST00000311117.7_1_7:104716496-104717548:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8187744021416	2	497.815147	993.615742	3.131	0.0015587	3.2581	0.0016219	6.3891	0.0031806	497.8168801558819	107.64	0.16417	107.8	107.7	107.86	0.15795					28	8	4	0	0	0	0.89176	1	46281	46281		0.79363	0.10326	1	151520000	+		39260	12365	19274	19357	45569	45569					0.11867877947065608
VMLKLKSL	8	Unmodified	_VMLKLKSL_					0	0	0		ENST00000510461.5_1_5:131066679-131080342:-|nuORF	ENST00000510461.5_1_5:131066679-131080342:-|nuORF	ENST00000510461.5_1_5:131066679-131080342:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	466.3022949099541	2	466.304081	930.59361	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.607	1	55.577	55.077	56.077	1.9697								0	0	0	1.0178	1	22460	22460		2.5775	0	1				39261	7028	19275	19358	45570	45570					0.12553653478619253
VMLLIIILLE	10	Unmodified	_VMLLIIILLE_					0	0	0		tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1169.760913074017	1	1169.75778	1168.7505	3.0098	0.0035208	-0.12614	-0.00014755	2.8837	0.0033732	1169.7575063323889	85.794	1.0478	87.342	86.536	87.584	1.547					154	43	4	0	0	0	0.89803	1	36068	36068		0	0	1	203320000			39262	16957	19276	19359	45571	45571					0.1728789357828191
VMLLLLLP	8	Unmodified	_VMLLLLLP_					0	0	0		ENSG00000110944|ENST00000228534|IL23A	ENSG00000110944|ENST00000228534|IL23A	ENSG00000110944|ENST00000228534|IL23A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5368835330009	3	304.538125	910.592547	-2.8628	-0.00087184	-0.97847	-0.00029798	-3.8413	-0.0011698	304.5379790137935	27.395	1.2971	27.395	26.325	27.622	0					81	42	2	0	0	0	0.89185	1	11358	11358		0.45834	0	1	5505000			39263	1721	19277	19360	45572	45572					0.1336743910972018
VMLLLLLP	8	Unmodified	_VMLLLLLP_					0	0	0		ENSG00000110944|ENST00000228534|IL23A	ENSG00000110944|ENST00000228534|IL23A	ENSG00000110944|ENST00000228534|IL23A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.1924621462822	3	304.538125	910.592547	-0.27764	-8.4553E-05	-3.5822	-0.0010909	-3.8599	-0.0011755	304.53701109160926	28.68	0.48975	29.963	29.579	30.069	1.2825					22	15	2	0	0	0	2.3239	1	12068	12068		0.45834	0	1	1115000			39264	1721	19277	19360	45573	45573					0.1336743910972018
VMLLVKSLK	9	Unmodified	_VMLLVKSLK_					0	0	0		tr|A0A553SKQ7|A0A553SKQ7_NIACIDNAprimaseOS=NialliacirculansOX=1397GN=dnaGPE=3SV=1	tr|A0A553SKQ7|A0A553SKQ7_NIACIDNAprimaseOS=NialliacirculansOX=1397GN=dnaGPE=3SV=1	tr|A0A553SKQ7|A0A553SKQ7_NIACIDNAprimaseOS=NialliacirculansOX=1397GN=dnaGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2270080447197	3	344.227951	1029.66202	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.613	1	26.872	26.372	27.372	1.2594								0	0	0	0.42693	1	10726	10726		1.1933	0	1				39265	16302	19278	19361	45574	45574					0.14837898058453902
VMLPKIFILYL	11	Unmodified	_VMLPKIFILYL_					0	0	0			REV__ENST00000588022.1_1_17:33786947-33787550:-|nuORF	REV__ENST00000588022.1_1_17:33786947-33787550:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	449.9449951052666	3	450.613694	1348.81925	2.667	0.0012018	-1.1416	-0.00051442	1.5254	0.00068739	450.6131170262209	75.634	0.61765	76.94	76.706	77.324	1.3063					24	19	2	0	0	0	0.14606	1	31739	31739		10.315	3.2781	1	1291000	+		39266	14041	19279	19362	45575	45575					0.15879557878020023
VMLVRGGR	8	Unmodified	_VMLVRGGR_					0	0	0			REV__ENST00000490321.1_1_9:77702718-77702775:-|nuORF	REV__ENST00000490321.1_1_9:77702718-77702775:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	444.3368408083916	2	444.265822	886.517091	0.94982	0.00042197	2.5882	0.0011498	3.538	0.0015718	444.2675588937409	109.1	0.6912	109.1	108.86	109.55	0					48	31	2	0	0	0	2.3239	1	47228	47228		0.69038	0	1	8812500	+		39267	13421	19280	19363	45576	45576					0.06929274702019939
VMMEEFVQL	9	Unmodified	_VMMEEFVQL_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.2726318240166	2	563.269578	1124.5246	1.418	0.00079874	2.0762	0.0011694	3.4942	0.0019682	563.2711537333506	76.577	0.22215	76.577	76.497	76.719	0					9	6	2	0	0	0	0.5697	1	31890	31890		12.532	5.2423	1	365070			39268	2990	19281	19364	45577	45577					-0.03267798603224037
VMMEEFVQL	9	Unmodified	_VMMEEFVQL_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2719604372978	2	563.269578	1124.5246	2.8482	0.0016043	0.48233	0.00027168	3.3305	0.001876	563.2690456340766	74.684	0.28212	76.466	76.356	76.638	1.7817					13	8	2	0	0	0	0.44535	1	31350	31350		18.135	2.2878	1	917190			39269	2990	19281	19364	45578	45578					-0.03267798603224037
VMMEEFVQL	9	Unmodified	_VMMEEFVQL_					0	0	0		ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	ENSG00000142207|ENST00000382751|URB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	563.269578	1124.5246	2.8752	0.0016195	0.10239	5.7674E-05	2.9776	0.0016772	563.2688813249058	75.172	0.27358	76.478	76.311	76.585	1.3063	-0.028955	-0.0010053	NaN	18.135	16	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1165900			39270	2990	19281	19364							-0.03267798603224037
VMMPRIKLV	9	Unmodified	_VMMPRIKLV_					0	0	0		ENST00000440965.1_1_2:202003207-202003609:-|nuORF	ENST00000440965.1_1_2:202003207-202003609:-|nuORF	ENST00000440965.1_1_2:202003207-202003609:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	363.2532836794853	3	362.889052	1085.64533	-1.3102	-0.00047546	-1.9727	-0.00071585	-3.2829	-0.0011913	362.888605900686	30.302	0.24663	30.302	30.131	30.377	0					9	7	2	0	0	0	0.11938	1	12654	12654		1.1933	1.1933	1	614670			39271	6554	19282	19365	45579	45579					0.10593073900872696
VMPARLWGML	10	Unmodified	_VMPARLWGML_					0	0	0			REV__ENST00000237536.8_2_20:35422463-35422682:-|nuORF	REV__ENST00000237536.8_2_20:35422463-35422682:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	587.3184081912041	2	587.317197	1172.61984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.743	1	71.067	70.567	71.567	0.32359								0	0	0	0.66155	1	29614	29614		1.8442	0.19162	1		+		39272	12114	19283	19366	45580	45580					0.0404359937845129
VMPSSFFLL	9	Unmodified	_VMPSSFFLL_					0	0	0		ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	ENSG00000143155|ENST00000367833|TIPRL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	521.3965331912041	2	520.777896	1039.54124	4.256	0.0022164	-0.37299	-0.00019425	3.883	0.0020222	520.7776004755162	94.866	0.32174	95.607	95.391	95.713	0.74123					15	10	2	0	0	0	0.116	1	39933	39933		9.3474	0	1	607490			39273	3017	19284	19367	45581	45581					0.023050703450280707
VMPWCSPQE	9	Unmodified	_VMPWCSPQE_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.7311279177666	2	538.73062	1075.44669	0.5107	0.00027513	-1.9984	-0.0010766	-1.4877	-0.00080144	538.7310284397201	15.833	0.68319	15.833	15.467	16.15	0					45	21	3	0	0	0	0.49082	1	6578	6578		15.847	3.6065	1	1134300			39274	4515	19285	19368	45582	45582					-0.08801811468606502
VMPWCSPQE	9	Unmodified	_VMPWCSPQE_					0	0	0		ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	ENSG00000179409|ENST00000319004|GEMIN4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	538.73062	1075.44669	0.33601	0.00018102	0.19893	0.00010717	0.53494	0.00028819	538.7318220971301	15.205	0.37147	15.974	15.834	16.205	0.76937	0.020933	4.4252E-05	NaN	15.847	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	448120			39275	4515	19285	19368							-0.08801811468606502
VMRHPLLR	8	Unmodified	_VMRHPLLR_					0	0	0		DNAH10|p.I1041Lfs*26|1|0.09|ENSG00000197653|chr12:123813493-123813493|A/-|frameshift_variant	DNAH10|p.I1041Lfs*26|1|0.09|ENSG00000197653|chr12:123813493-123813493|A/-|frameshift_variant	DNAH10|p.I1041Lfs*26|1|0.09|ENSG00000197653|chr12:123813493-123813493|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.3094360232353	2	511.308021	1020.60149	1.4592	0.00074609	0.12827	6.5584E-05	1.5874	0.00081167	511.3074857658362	102.73	0.53416	102.73	102.4	102.93	0					112	39	4	0	0	0	0.89176	1	43071	43071		0.79363	0	1	75857000			39276	414	19286	19369	45583	45583					0.09201225518779665
VMSATFAKF	9	Unmodified	_VMSATFAKF_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.2624084353447	2	501.259871	1000.50519	2.2972	0.0011515	0.0010018	5.0217E-07	2.2982	0.001152	501.2600930480179	41.475	0.35429	42.8	42.619	42.973	1.3254					27	10	3	0	0	0	0.040497	2	17372	17372;17420		75.761	37.61	1	2060400			39277	962	19287	19370	45584;45585	45584					0.004956131681524312
VMSATFAKF	9	Unmodified	_VMSATFAKF_					0	0	0		ENST00000479806.1_1_2:172583261-172604396:+|nuORF;nc|ENSG00000077380|Q13409-6|DYNC1I2;nc|ENSG00000077380|Q13409-3|DYNC1I2;nc|ENSG00000077380|Q13409-7|DYNC1I2;nc|ENSG00000077380|Q13409-2|DYNC1I2;nc|ENSG00000077380|Q13409-5|DYNC1I2;ENSG00000077380|ENST00000397119|DYNC1I2;ENST00000435916.1_1_10:52025510-52026503:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	ENST00000479806.1_1_2:172583261-172604396:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2614623904228	2	501.259871	1000.50519	1.749	0.00087668	0.77193	0.00038694	2.5209	0.0012636	501.2602424558327	41.047	0.31985	42.94	42.768	43.088	1.8927					21	9	3	0	0	0	0.070055	2	17187	17187;17236		60.074	29.849	1	2175500			39278	962	19287	19370	45586;45587	45586					0.004956131681524312
VMSGHCPLPS	10	Unmodified	_VMSGHCPLPS_					0	0	0		nc|ENSG00000114805|Q4KWH8-2|PLCH1;ENSG00000114805|ENST00000460012|PLCH1;nc|ENSG00000114805|Q4KWH8|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2397949099541	2	514.238612	1026.46267	2.8597	0.0014706	-0.78261	-0.00040245	2.0771	0.0010681	514.2381954379947	86.139	0.45294	86.139	85.914	86.367	0					51	14	5	0	0	0	0.65574	1	35897	35897		20.454	6.5476	1	5910800			39279	1882	19288	19371	45588	45588					-0.0495010523172823
VMSGHCPLPS	10	Unmodified	_VMSGHCPLPS_					0	0	0		nc|ENSG00000114805|Q4KWH8-2|PLCH1;ENSG00000114805|ENST00000460012|PLCH1;nc|ENSG00000114805|Q4KWH8|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2402831912041	2	514.238612	1026.46267	2.2569	0.0011606	0.34722	0.00017855	2.6041	0.0013391	514.2388862211869	84.659	0.59084	85.818	85.527	86.118	1.159					87	18	8	0	0	0	0.51515	1	35516	35516		26.884	9.9414	1	27169000			39280	1882	19288	19371	45589	45589					-0.0495010523172823
VMSGHCPLPS	10	Unmodified	_VMSGHCPLPS_					0	0	0		nc|ENSG00000114805|Q4KWH8-2|PLCH1;ENSG00000114805|ENST00000460012|PLCH1;nc|ENSG00000114805|Q4KWH8|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	nc|ENSG00000114805|Q4KWH8-2|PLCH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2396118044853	2	514.238612	1026.46267	2.467	0.0012686	0.50987	0.0002622	2.9768	0.0015308	514.2385200732263	84.152	0.64054	85.79	85.559	86.199	1.6379					73	20	5	0	0	0	0.51515	2	35298	35298;35354		26.884	3.7352	1	19161000			39281	1882	19288	19371	45590;45591	45590					-0.0495010523172823
VMSVRCINM	9	Unmodified	_VMSVRCINM_					0	0	0			REV__ENST00000495807.1_1_6:31826908-31826989:-|nuORF	REV__ENST00000495807.1_1_6:31826908-31826989:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7598754763603	2	526.756115	1051.49768	2.1278	0.0011209	3.3757	0.0017782	5.5035	0.002899	526.7583783395431	68.77	0.62885	70.136	69.784	70.413	1.3657					59	19	4	0	0	0	0.66839	1	28905	28905		8.5933	1.304	1	5373300	+		39282	13462	19289	19372	45592	45592					-0.026011856954255563
VMTKHLTEK	9	Unmodified	_VMTKHLTEK_					0	0	0			REV__nc|ENSG00000182872|P98175-4|RBM10	REV__nc|ENSG00000182872|P98175-4|RBM10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	363.2533447146416	3	362.870715	1085.59032	0.86944	0.0003155	-1.8488	-0.00067086	-0.97932	-0.00035537	362.8698747807693	29.68	0.39684	29.964	29.747	30.144	0.28339					23	12	2	0	0	0	0.11909	1	12487	12487		0.96228	0.69326	1	708490	+		39283	11367	19290	19373	45593	45593					0.05094358633959928
VMTVVLQIGI	10	Unmodified	_VMTVVLQIGI_					0	0	0			REV__ENSG00000164180|ENST00000296595|TMEM161B	REV__ENSG00000164180|ENST00000296595|TMEM161B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	537.2886230349541	2	536.825378	1071.6362	2.319	0.0012449	-2.2559	-0.001211	0.063106	3.3877E-05	536.8243264121219	58.711	0.32857	60.68	60.516	60.844	1.969					17	10	2	0	0	0	0.12351	1	24635	24635		20.454	0	1	1385700	+		39284	10722	19291	19374	45594	45594					0.10325003816205935
VMVERVFFS	9	Unmodified	_VMVERVFFS_					0	0	0		tr|A0A553SG22|A0A553SG22_NIACIPrkAfamilyserineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_09965PE=4SV=1	tr|A0A553SG22|A0A553SG22_NIACIPrkAfamilyserineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_09965PE=4SV=1	tr|A0A553SG22|A0A553SG22_NIACIPrkAfamilyserineproteinkinaseOS=NialliacirculansOX=1397GN=CEQ21_09965PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2936889529228	2	557.291702	1112.56885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.234	1	42.097	41.597	42.597	1.8624								0	0	0	0.42693	1	16868	16868		2.0598	0	1				39285	16092	19292	19375	45595	45595					0.01706973605246276
VMVKNIER	8	Unmodified	_VMVKNIER_					0	0	0		POLA1-TSPAN7|1|fusion;nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1	POLA1-TSPAN7|1|fusion	POLA1-TSPAN7|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.1910888552666	3	330.191788	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.889	1	21.412	20.912	21.912	1.5237								0	0	0	1.0178	1	8267	8267		0.45834	0	1				39286	1368	19293	19376	45596	45596					0.05926106808044551
VMVKNIER	8	Unmodified	_VMVKNIER_					0	0	0		POLA1-TSPAN7|1|fusion;nc|ENSG00000101868|P09884|POLA1;ENSG00000101868|ENST00000379068|POLA1	POLA1-TSPAN7|1|fusion	POLA1-TSPAN7|1|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.1908752322197	3	330.191788	987.553536	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.088	1	21.612	21.112	22.112	1.5237								0	0	0	1.0178	1	8352	8352		0.45834	0	1				39287	1368	19293	19376	45597	45597					0.05926106808044551
VMVRRKHR	8	Unmodified	_VMVRRKHR_					0	0	0		nc|ENSG00000134253|Q9H8W5-2|TRIM45;ENSG00000134253|ENST00000256649|TRIM45	nc|ENSG00000134253|Q9H8W5-2|TRIM45	nc|ENSG00000134253|Q9H8W5-2|TRIM45	MSMS	GG20161007_CRH_Patient100_W632_01	3	361.2219116091728	3	361.222305	1080.64509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.33	1	106.49	105.99	106.99	0.15781								0	0	0	1.0178	1	45513	45513		0.45834	0.057624	1				39288	2603	19294	19377	45598	45598					0.10798835015884833
VMVRRVIL	8	Unmodified	_VMVRRVIL_					0	0	0		POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant;nc|ENSG00000013503|Q9NW08-2|POLR3B;ENSG00000013503|ENST00000228347|POLR3B	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.0048095583916	3	329.216157	984.626641	-0.52285	-0.00017213	0.055693	1.8335E-05	-0.46716	-0.0001538	329.21622686553013	19.358	0.28024	20.416	20.26	20.54	1.0585					15	8	2	0	0	0	2.3239	1	8054	8054		0.45834	0	1	281090			39289	583	19295	19378	45599	45599					0.13371280321348422
VMVRRVIL	8	Unmodified	_VMVRRVIL_					0	0	0		POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant;nc|ENSG00000013503|Q9NW08-2|POLR3B;ENSG00000013503|ENST00000228347|POLR3B	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	POLR3B|p.L708Tfs*13|1|0.06|ENSG00000013503|chr12:106454510-106454511|-/GATACAACCAGCGAAACAGAATT|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	329.216157	984.626641	-0.21273	-7.0035E-05	-1.3235	-0.00043573	-1.5363	-0.00050577	329.21594710288133	18.677	0.34097	20.125	19.994	20.335	1.448	-0.14577	-0.00079035	NaN	0.45834	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	169710			39290	583	19295	19378							0.13371280321348422
VNAAAAAA	8	Unmodified	_VNAAAAAA_					0	0	0		SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	657.6404296755791	1	658.351865	657.344589	1.4881	0.0009797	-4.3485	-0.0028628	-2.8604	-0.0018831	658.3495396802274	106.66	0.11564	106.66	106.61	106.72	0					7	5	2	0	0	0	2.3239	1	45588	45588		0	0	1	2316800			39291	8098	19296	19379	45600	45600					0.0022102656625975214
VNAAAAAA	8	Unmodified	_VNAAAAAA_					0	0	0		SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	SKIDA1|p.G661A|1|0.18|ENSG00000180592|chr10:21515841-21515841|C/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	658.351865	657.344589	2.6709	0.0017584	-4.0722	-0.0026809	-1.4013	-0.00092256	658.349118930259	106.64	0.080826	106.7	106.64	106.72	0.05455	0.016883	3.7579E-05	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2863300			39292	8098	19296	19379							0.0022102656625975214
VNAVLVSP	8	Unmodified	_VNAVLVSP_					0	0	0		tr|A0A7D6VY30|A0A7D6VY30_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15200PE=3SV=1	tr|A0A7D6VY30|A0A7D6VY30_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15200PE=3SV=1	tr|A0A7D6VY30|A0A7D6VY30_9CLOTGlycosidehydrolasefamily1proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15200PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7390319705009	2	399.739628	797.464704	1.0665	0.00042633	-3.3562	-0.0013416	-2.2897	-0.00091527	399.73838009382416	67.236	0.55307	69.125	68.86	69.413	1.8889					44	17	3	0	0	0	0.88587	1	28250	28250		5.2307	0.47466	1	9971000			39293	16995	19297	19380	45601	45601					0.05787014840041138
VNDHAPQFPEK	11	Unmodified	_VNDHAPQFPEK_					0	0	0		ENSG00000124215|ENST00000348616|CDH26;nc|ENSG00000124215|Q8IXH8-1|CDH26	ENSG00000124215|ENST00000348616|CDH26	ENSG00000124215|ENST00000348616|CDH26	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.8792297244072	3	427.878926	1280.61495	-0.1091	-4.668E-05	2.0821	0.00089087	1.973	0.00084419	427.87959247587474	15.706	0.87045	15.706	15.186	16.056	0					60	27	3	0	0	0	0.82375	1	6511	6511		8.2864	0	1	2982100			39294	2218	19298	19381	45602	45602					-0.014132899589640147
VNDSFDGS	8	Unmodified	_VNDSFDGS_					0	0	0			REV__CON__Q3TTY5	REV__CON__Q3TTY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.3373901247978	1	840.337003	839.329727	0.74436	0.00062551	0.40061	0.00033664	1.145	0.00096216	840.3378999361393	58.479	0.31248	59.897	59.722	60.035	1.4181					20	9	3	0	0	0	0.83518	2	24499	24499;24551		18.135	0	1	3829600	+	+	39295	8392	19299	19382	45603;45604	45603					-0.0963651009236628
VNDTNIYF	8	Unmodified	_VNDTNIYF_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1573058962822	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.883	1	38.883	38.383	39.383	0								0	0	0	1.0178	1	16300	16300		0.45834	0	1		+		39296	13485	19300	19383	45605	45605					-0.03758798236151506
VNDTNIYF	8	Unmodified	_VNDTNIYF_					0	0	0			REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	REV__nc|ENSG00000114841|Q9P2D7-3|DNAH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.1575195193291	3	329.15903	984.455261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.211	1	43.211	42.711	43.711	0								0	0	0	1.0178	1	18090	18090		0.45834	0	1		+		39297	13485	19300	19383	45606	45606					-0.03758798236151506
VNELLFIQF	9	Unmodified	_VNELLFIQF_					0	0	0			REV__ENST00000310421.4_1_8:67543945-67544044:-|nuORF	REV__ENST00000310421.4_1_8:67543945-67544044:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8160278201103	2	561.813325	1121.6121	4.8627	0.002732	0.52159	0.00029304	5.3843	0.003025	561.8135086117438	89.937	0.34593	90.957	90.769	91.115	1.0199					21	10	3	0	0	0	0.18809	1	37890	37890		34.402	5.3201	1	1453200	+		39298	12361	19301	19384	45607	45607					0.05615486654187407
VNFVRDCNM	9	Unmodified	_VNFVRDCNM_					0	0	0			REV__ENSG00000104824|ENST00000221419|HNRNPL	REV__ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2463867068291	2	549.246969	1096.47938	1.4083	0.00077351	-2.8438	-0.001562	-1.4355	-0.00078845	549.2452307890819	71.735	0.53073	73.076	72.779	73.31	1.3415					29	16	2	0	0	0	0.70108	1	30117	30117		7.2892	0.56607	1	3050900	+		39299	9147	19302	19385	45608	45608					-0.06499604345776788
VNGCEECSFPK	11	Unmodified	_VNGCEECSFPK_					0	0	0			REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	REV__nc|ENSG00000250312|Q3SXZ3-2|ZNF718	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2105590701103	2	606.754824	1211.49509	0.78381	0.00047558	-2.2445	-0.0013619	-1.4607	-0.00088628	606.7537525785398	11.515	0.30824	11.515	11.357	11.665	0					15	9	2	0	0	0	0.14606	1	4749	4749		5.7319	2.9967	1	328130	+		39300	11950	19303	19386	45609	45609					-0.10219362619409367
VNGLIALV	8	Unmodified	_VNGLIALV_					0	0	0			REV__ENSG00000128271|ENST00000337539|ADORA2A	REV__ENSG00000128271|ENST00000337539|ADORA2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7579223513603	2	399.757821	797.501089	1.7132	0.00068487	-2.9458	-0.0011776	-1.2326	-0.00049273	399.7567572170434	76.951	0.57436	78.719	78.419	78.993	1.7672					37	17	4	0	0	0	0.89176	1	32336	32336		0.79363	0	1	3602900	+		39301	9726	19304	19387	45610	45610					0.09423891736742007
VNIAPIIK	8	Unmodified	_VNIAPIIK_					0	0	0		tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.2883483767509	2	434.286746	866.558939	0.66864	0.00029038	3.0793	0.0013373	3.7479	0.0016277	434.2881461699518	106.22	0.17194	106.22	106.13	106.31	0					26	8	4	0	0	0	0.89178	1	45264	45264		0.69038	0	1	162630000			39302	16567	19305	19388	45611	45611					0.12032153662187284
VNIAPIIK	8	Unmodified	_VNIAPIIK_					0	0	0		tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	867.5679809451103	1	867.566215	866.558939	1.1845	0.0010276	1.0222	0.00088681	2.2067	0.0019144	867.5668180326942	107.81	0.22746	107.81	107.68	107.91	0					43	12	5	0	0	0	0.89178	1	46272	46272		0.69038	0	1	523580000			39303	16567	19305	19388	45612	45612					0.12032153662187284
VNIAPIIK	8	Unmodified	_VNIAPIIK_					0	0	0		tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2882873415947	2	434.286746	866.558939	3.1533	0.0013694	0.18984	8.2444E-05	3.3431	0.0014519	434.2869540816017	106.18	0.15957	106.24	106.15	106.31	0.05455					23	7	5	0	0	0	0.89178	1	45166	45166		0.69038	0	1	131520000			39304	16567	19305	19388	45613	45613					0.12032153662187284
VNIAPIIK	8	Unmodified	_VNIAPIIK_					0	0	0		tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	tr|A0A553SRL9|A0A553SRL9_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_01330PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	434.286746	866.558939	3.3048	0.0014352	0.72381	0.00031434	4.0286	0.0017496	434.28712181652304	105.99	0.11869	106.15	106.08	106.2	0.15859	-0.052024	-0.00063141	NaN	0.69038	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28275000			39305	16567	19305	19388							0.12032153662187284
VNIEPLPPVVT	11	Unmodified	_VNIEPLPPVVT_					0	0	0		IGSF21|p.A38T|1|0.48|ENSG00000117154|chr1:18227939-18227939|G/A|missense_variant	IGSF21|p.A38T|1|0.48|ENSG00000117154|chr1:18227939-18227939|G/A|missense_variant	IGSF21|p.A38T|1|0.48|ENSG00000117154|chr1:18227939-18227939|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3444091677666	2	589.344989	1176.67542	1.6397	0.00096635	-2.9475	-0.0017371	-1.3078	-0.00077073	589.3432936317366	78.417	0.74825	78.726	78.388	79.136	0.30932					56	23	3	0	0	0	1.0366	2	32730	32730;32833		1.1933	0.79263	1	1708800			39306	7656	19306	19389	45614;45615	45614					0.09415427371436635
VNIINVEKPSI	11	Unmodified	_VNIINVEKPSI_					0	0	0		ENSG00000018869|ENST00000586929|ZNF582	ENSG00000018869|ENST00000586929|ZNF582	ENSG00000018869|ENST00000586929|ZNF582	MSMS	GG20161007_CRH_Patient100_W632_01	3	613.3666869997978	2	613.36117	1224.70779	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.507	1	89.563	89.063	90.063	1.0562								0	0	0	0.38742	1	37315	37315		31.268	0	1				39307	607	19307	19390	45616	45616					0.10442214774434433
VNILKLTSK	9	Unmodified	_VNILKLTSK_					0	0	0			REV__nc|ENSG00000133863|Q9BXT5|TEX15	REV__nc|ENSG00000133863|Q9BXT5|TEX15	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.2238952517509	3	339.221853	1014.64373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.268	1	58.268	57.768	58.768	0								0	0	0	0.42693	1	24308	24308		1.1933	0	1		+		39308	9887	19308	19391	45617	45617					0.1369947940812608
VNIPVLKVRK	10	Unmodified	_VNIPVLKVRK_					0	0	0		ENSG00000126814|ENST00000261249|TRMT5	ENSG00000126814|ENST00000261249|TRMT5	ENSG00000126814|ENST00000261249|TRMT5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	583.3931152224541	2	583.392608	1164.77066	1.2719	0.000742	-1.083	-0.00063179	0.1889	0.0001102	583.3926560511525	106.04	0.14156	106.04	105.97	106.11	0					15	6	3	0	0	0	0.89803	1	45161	45161		0.40072	0	1	99969000			39309	2317	19309	19392	45618	45618					0.19486825353101267
VNIPVLKVRK	10	Unmodified	_VNIPVLKVRK_					0	0	0		ENSG00000126814|ENST00000261249|TRMT5	ENSG00000126814|ENST00000261249|TRMT5	ENSG00000126814|ENST00000261249|TRMT5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3934814333916	2	583.392608	1164.77066	2.6403	0.0015403	-2.1356	-0.0012459	0.50472	0.00029445	583.3921589101672	106.02	0.14369	106.07	105.98	106.12	0.05455					17	6	4	0	0	0	0.89803	1	45075	45075		0.40072	0	1	92067000			39310	2317	19309	19392	45619	45619					0.19486825353101267
VNISASFRRK	10	Unmodified	_VNISASFRRK_					0	0	0		ENST00000503240.5_1_5:148743537-148748214:+|nuORF;ENST00000505669.5_1_5:148737686-148748214:+|nuORF;ENSG00000145882|ENST00000274569|PCYOX1L	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	ENST00000503240.5_1_5:148743537-148748214:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3448974490166	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.89803	1	32602	32602		1.3295	0	1	9065200			39311	3128	19310	19393	45620	45620					0.09147016757128767
VNIVGSPL	8	Unmodified	_VNIVGSPL_					0	0	0			REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7401306033134	2	399.739628	797.464704	0.16138	6.4511E-05	-1.176	-0.0004701	-1.0146	-0.00040559	399.7395940338387	66.878	0.35112	66.878	66.671	67.022	0					18	10	2	0	0	0	0.88587	1	27848	27848		5.2307	0	1	1180200	+		39312	14927	19311	19394	45621	45621					0.057870148400297694
VNIVGSPL	8	Unmodified	_VNIVGSPL_					0	0	0			REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7393066287041	2	399.739628	797.464704	1.0665	0.00042633	-3.3562	-0.0013416	-2.2897	-0.00091527	399.73838009382416	67.236	0.55307	69.125	68.86	69.413	1.8889					44	17	3	0	0	0	0.88587	1	28150	28150		5.2307	0	1	9971000	+		39313	14927	19311	19394	45622	45622					0.057870148400297694
VNIVGSPL	8	Unmodified	_VNIVGSPL_					0	0	0			REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	399.739628	797.464704	0.16138	6.4511E-05	-1.176	-0.0004701	-1.0146	-0.00040559	399.7395940338387	66.878	0.35112	66.878	66.671	67.022	0	-0.19988	0.0016337	NaN	5.2307	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1180200	+		39314	14927	19311	19394							0.057870148400297694
VNIVGSPL	8	Unmodified	_VNIVGSPL_					0	0	0			REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	399.739628	797.464704	1.9665	0.0007861	-3.7733	-0.0015084	-1.8068	-0.00072226	399.738407577548	66.709	0.37637	67.033	66.843	67.22	0.32449	-0.044183	-0.00044282	NaN	5.2307	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1290400	+		39315	14927	19311	19394							0.057870148400297694
VNIVGSPL	8	Unmodified	_VNIVGSPL_					0	0	0			REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	REV__tr|A0A553SK10|A0A553SK10_NIACIReplicationinitiationandmembraneattachmentproteinOS=NialliacirculansOX=1397GN=CEQ21_17900PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	399.739628	797.464704	1.6493	0.00065929	-3.9922	-0.0015958	-2.3429	-0.00093655	399.73839262909684	65.413	0.40353	67.321	67.063	67.466	1.9085	0.24407	-0.00061778	NaN	5.2307	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	943000	+		39316	14927	19311	19394							0.057870148400297694
VNIVKGTNR	9	Unmodified	_VNIVKGTNR_					0	0	0			REV__tr|A0A7D7A068|A0A7D7A068_9CLOTRhodanese-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08750PE=4SV=1	REV__tr|A0A7D7A068|A0A7D7A068_9CLOTRhodanese-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7988769412041	2	500.79854	999.582528	1.7093	0.00085602	-0.217	-0.00010867	1.4923	0.00074735	500.79797369768573	77.611	0.43394	77.611	77.377	77.811	0					32	13	3	0	0	0	0.83753	1	32350	32350		1.8442	0	1	6020200	+		39317	15807	19312	19395	45623	45623					0.08271967428709104
VNIVQITV	8	Unmodified	_VNIVQITV_					0	0	0			REV__ENSG00000134757|ENST00000257189|DSG3	REV__ENSG00000134757|ENST00000257189|DSG3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	443.2733032107353	2	443.273835	884.533118	1.2975	0.00057513	-2.5971	-0.0011512	-1.2997	-0.00057611	443.2725673295442	69.07	0.5583	69.07	68.768	69.326	0					40	17	3	0	0	0	0.8873	1	28803	28803		4.3292	0	1	9058700	+		39318	9916	19313	19396	45624	45624					0.08623259419880469
VNKSSKKL	8	Unmodified	_VNKSSKKL_					0	0	0		tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2862426638603	2	452.284734	902.554916	3.3628	0.0015209	0.63364	0.00028659	3.9964	0.0018075	452.2851157998216	104.49	0.092674	104.65	104.58	104.67	0.16055					13	4	4	0	0	0	0.89051	1	44270	44270		2.3027	0	1	34208000			39319	17115	19314	19397	45625	45625					0.09974064168477526
VNLHRIEKD	9	Unmodified	_VNLHRIEKD_					0	0	0		ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENSG00000167037|ENST00000400358|SGSM1;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3151733279228	2	562.314554	1122.61456	0.67995	0.00038235	-0.15638	-8.7932E-05	0.52358	0.00029441	562.3149723767741	23.365	0.37546	23.599	23.346	23.721	0.23306					17	11	2	0	0	0	0.49082	1	9758	9758		15.847	0	1	328090			39320	3944	19315	19398	45626	45626					0.058153351118335195
VNLHRIEKD	9	Unmodified	_VNLHRIEKD_					0	0	0		ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENSG00000167037|ENST00000400358|SGSM1;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	562.314554	1122.61456	0.55194	0.00031036	1.0875	0.00061154	1.6395	0.0009219	562.3151599508642	23.478	0.30482	23.478	23.291	23.596	0	-0.051596	0.00062974	NaN	15.847	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	254920			39321	3944	19315	19398							0.058153351118335195
VNLHRIEKD	9	Unmodified	_VNLHRIEKD_					0	0	0		ENST00000473458.5_1_22:25240737-25320238:+|nuORF;ENSG00000167037|ENST00000400358|SGSM1;ENST00000480523.1_1_22:25240737-25320238:+|nuORF;nc|ENSG00000167037|Q2NKQ1|SGSM1;nc|ENSG00000167037|Q2NKQ1-3|SGSM1	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	ENST00000473458.5_1_22:25240737-25320238:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	562.314554	1122.61456	0.48822	0.00027453	-0.74722	-0.00042017	-0.259	-0.00014564	562.3138134131319	21.896	0.23227	23.512	23.377	23.61	1.6158	-0.017454	-0.0014337	NaN	15.847	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	226040			39322	3944	19315	19398							0.058153351118335195
VNLKEGHKRK	10	Unmodified	_VNLKEGHKRK_					0	0	0			REV__ENST00000478914.1_1_22:42052971-42057696:+|nuORF	REV__ENST00000478914.1_1_22:42052971-42057696:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.8654052615166	2	604.864746	1207.71494	1.7699	0.0010705	0.26026	0.00015742	2.0301	0.001228	604.8645248790502	97.614	0.153	97.614	97.507	97.66	0					9	4	3	0	0	0	0.89803	1	40808	40808		1.4819	0	1	2628600	+		39323	13331	19316	19399	45627	45627					0.11938992165482887
VNLKEGHKRK	10	Unmodified	_VNLKEGHKRK_					0	0	0			REV__ENST00000478914.1_1_22:42052971-42057696:+|nuORF	REV__ENST00000478914.1_1_22:42052971-42057696:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	604.864746	1207.71494	1.7699	0.0010705	0.26026	0.00015742	2.0301	0.001228	604.8645248790502	97.614	0.153	97.614	97.507	97.66	0	-0.01122	0.0001863	NaN	1.4819	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2628600	+		39324	13331	19316	19399							0.11938992165482887
VNLKGWVQKRR	11	Unmodified	_VNLKGWVQKRR_					0	0	0		tr|A0A553SKC9|A0A553SKC9_NIACIAspartate--tRNA(Asp/Asn)ligaseOS=NialliacirculansOX=1397GN=aspSPE=3SV=1	tr|A0A553SKC9|A0A553SKC9_NIACIAspartate--tRNA(Asp/Asn)ligaseOS=NialliacirculansOX=1397GN=aspSPE=3SV=1	tr|A0A553SKC9|A0A553SKC9_NIACIAspartate--tRNA(Asp/Asn)ligaseOS=NialliacirculansOX=1397GN=aspSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	461.9496337771416	3	461.949239	1382.82589	3.9791	0.0018382	-3.0321	-0.0014007	0.94702	0.00043748	461.94778671414485	97.045	0.14828	97.329	97.242	97.39	0.28442					16	5	4	0	0	0	1.039	1	40829	40829		0.45452	0.046251	1	8348200			39325	16285	19317	19400	45628	45628					0.14978631873577797
VNLKRLLYL	9	Unmodified	_VNLKRLLYL_					0	0	0		ENST00000335420.9_1_7:129770582-129770654:+|nuORF	ENST00000335420.9_1_7:129770582-129770654:+|nuORF	ENST00000335420.9_1_7:129770582-129770654:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3660156130791	2	566.366059	1130.71756	3.2065	0.001816	-2.6181	-0.0014828	0.58836	0.00033323	566.3643262288308	105.99	0.15637	106.15	106.06	106.21	0.15859					31	7	5	0	0	0	0.85019	1	45252	45252		0.52476	0	1	808790000			39326	5909	19318	19401	45629	45629					0.15743447570457647
VNLKRLLYL	9	Unmodified	_VNLKRLLYL_					0	0	0		ENST00000335420.9_1_7:129770582-129770654:+|nuORF	ENST00000335420.9_1_7:129770582-129770654:+|nuORF	ENST00000335420.9_1_7:129770582-129770654:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3659545779228	2	566.366059	1130.71756	3.2618	0.0018474	-2.9182	-0.0016527	0.34366	0.00019464	566.3643289992451	105.96	0.17596	106.12	106.03	106.21	0.16674					31	8	5	0	0	0	0.85019	1	45173	45173		0.52476	0	1	607540000			39327	5909	19318	19401	45630	45630					0.15743447570457647
VNLLELQELVL	11	Unmodified	_VNLLELQELVL_					0	0	0		ENST00000562938.5_1_15:78207528-78213944:-|nuORF	ENST00000562938.5_1_15:78207528-78213944:-|nuORF	ENST00000562938.5_1_15:78207528-78213944:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8841430544853	2	641.884478	1281.7544	2.0667	0.0013266	-3.2578	-0.0020912	-1.1912	-0.00076458	641.8822617428297	78.111	0.63029	78.111	77.811	78.441	0					31	19	2	0	0	0	1.037	1	32564	32564		1.0715	0.46996	1	1347600			39328	7339	19319	19402	45631	45631					0.1247965460568139
VNLLKRTHR	9	Unmodified	_VNLLKRTHR_					0	0	0			REV__ENSG00000183304|ENST00000381003|FAM9A	REV__ENSG00000183304|ENST00000381003|FAM9A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8549072146416	2	568.854181	1135.69381	2.2108	0.0012576	-0.22364	-0.00012722	1.9872	0.0011304	568.8540865699008	88.409	0.8358	88.409	88.119	88.955	0					87	26	5	0	0	0	0.8523	1	36909	36909		0.52476	0	1	105930000	+		39329	11386	19320	19403	45632	45632					0.13139026856629243
VNLLWPQLLR	10	Unmodified	_VNLLWPQLLR_					0	0	0		nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	nc|ENSG00000187736|Q9H9Q4-2|NHEJ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.3816406130791	2	626.38224	1250.74993	2.728	0.0017088	-3.2613	-0.0020428	-0.53332	-0.00033406	626.3800645524086	93.286	0.47488	94.564	94.292	94.767	1.277					39	14	4	0	0	0	0.89803	1	39234	39234		0.40072	0	1	6226700			39330	7954	19321	19404	45633	45633					0.1345823497345009
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3208495974541	2	577.319837	1152.62512	0.9475	0.00054701	0.60965	0.00035196	1.5571	0.00089897	577.3202372186499	24.736	1.5078	24.736	24.211	25.718	0					135	48	5	0	0	0	0.0021387	11	10300	10153;10200;10249;10300;10339;10378;10421;10478;10541;10596;10710		137.42	87.87	1	36956000			39331	1049	19322	19405	45634;45635;45636;45637;45638;45639;45640;45641;45642;45643;45644	45637					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3203002810478	2	577.319837	1152.62512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.18	1	26.18	25.68	26.68	0								0	0	0	0.49364	1	10931	10931		26.268	6.9062	1				39332	1049	19322	19405	45645	45645					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	577.3193847537041	2	577.319837	1152.62512	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.636	1	26.636	26.136	27.136	0								0	0	0	0.52077	1	11128	11128		24.991	8.8419	1				39333	1049	19322	19405	45646	45646					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3207275271416	2	577.319837	1152.62512	0.71375	0.00041206	0.64613	0.00037303	1.3599	0.00078509	577.3202838896951	24.494	1.3155	24.737	24.288	25.603	0.24251					123	42	5	0	0	0	0.0027347	9	10300	10096;10142;10194;10246;10300;10360;10412;10464;10527		137.42	72.978	1	40753000			39334	1049	19322	19405	45647;45648;45649;45650;45651;45652;45653;45654;45655	45651					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3204833865166	2	577.319837	1152.62512	0.78333	0.00045223	0.5025	0.0002901	1.2858	0.00074233	577.3203179344246	25.904	0.70147	26.156	25.613	26.314	0.25197					33	22	2	0	0	0	0.16695	5	10708	10630;10708;10774;10825;10878		43.772	12.504	1	544750			39335	1049	19322	19405	45656;45657;45658;45659;45660	45657					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	577.3186523318291	2	577.319837	1152.62512	0.82782	0.00047792	-1.0251	-0.00059179	-0.19724	-0.00011387	577.3195485486922	26.559	1.1911	26.821	26.324	27.515	0.26173					60	38	2	0	0	0	0.42228	4	10930	10930;11071;11123;11179		26.268	7.6395	1	552130			39336	1049	19322	19405	45661;45662;45663;45664	45661					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3206664919853	2	577.319837	1152.62512	1.1806	0.0006816	0.2624	0.00015149	1.443	0.00083309	577.3199745880967	23.4	1.8941	24.615	24.166	26.06	1.2145					127	61	5	0	0	0	0.0021387	6	9783	9683;9732;9783;9835;9896;9975		137.42	87.87	1	25637000			39337	1049	19322	19405	45665;45666;45667;45668;45669;45670	45667					0.054913177662683665
VNLPINGNGKQ	11	Unmodified	_VNLPINGNGKQ_					0	0	0		ENSG00000084207|ENST00000398606|GSTP1;ENST00000494593.1_1_11:67353853-67354045:+|nuORF;ENST00000498765.5_1_11:67352240-67354045:+|nuORF	ENSG00000084207|ENST00000398606|GSTP1	ENSG00000084207|ENST00000398606|GSTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.3208495974541	2	577.319837	1152.62512	0.52958	0.00030574	0.77407	0.00044689	1.3036	0.00075262	577.3202708561241	23.02	1.583	24.671	24.259	25.842	1.6511					115	51	5	0	0	0	0.0016429	7	9586	9498;9548;9586;9625;9666;9726;9786		157.8	88.69	1	21732000			39338	1049	19322	19405	45671;45672;45673;45674;45675;45676;45677	45673					0.054913177662683665
VNLQVQAERP	10	Unmodified	_VNLQVQAERP_					0	0	0			REV__ENST00000478143.2_1_6:37617732-37622777:-|nuORF	REV__ENST00000478143.2_1_6:37617732-37622777:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3200561404228	2	577.319837	1152.62512	1.1806	0.0006816	0.2624	0.00015149	1.443	0.00083309	577.3199745880967	23.4	1.8941	24.615	24.166	26.06	1.2145					127	61	5	0	0	0	0.86043	1	10023	10023		5.7319	0	1	25637000	+		39339	9354	19323	19406	45678	45678					0.054913177662683665
VNLRKKKN	8	Unmodified	_VNLRKKKN_					0	0	0		ENST00000485767.1_1_9:124074589-124074895:+|nuORF	ENST00000485767.1_1_9:124074589-124074895:+|nuORF	ENST00000485767.1_1_9:124074589-124074895:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3254882693291	2	500.324725	998.634898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.11	1	106.27	105.77	106.77	0.16174								0	0	0	1.0178	1	45307	45307		0.69038	0	1				39340	6856	19324	19407	45679	45679					0.1355255056231499
VNLRRLRRW	9	Unmodified	_VNLRRLRRW_					0	0	0		SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	SLC9A8|p.S492Rfs*44|1|0.46|ENSG00000197818|chr20:49884051-49884051|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.5986816287041	3	423.59854	1267.77379	3.27	0.0013852	-2.1233	-0.00089944	1.1466	0.00048572	423.59755158570863	93.254	0.59981	94.531	94.228	94.828	1.277					60	18	5	0	0	0	0.8523	1	39180	39180		0.23584	0.028987	1	13168000			39341	15965	19325	19408	45680	45680					0.15061513250498137
VNLRVRLLL	9	Unmodified	_VNLRVRLLL_					0	0	0			REV__ENSG00000085840|ENST00000371568|ORC1	REV__ENSG00000085840|ENST00000371568|ORC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	365.9178954958916	3	365.916876	1094.7288	0.14302	5.2332E-05	3.6901	0.0013503	3.8331	0.0014026	365.9180501717032	22.004	0.25192	23.62	23.548	23.8	1.6158					10	6	2	0	0	0	0.85206	1	9179	9179		0.26902	0	1	278760	+		39342	8855	19326	19409	45681	45681					0.18522269664595115
VNLVATGHQSK	11	Unmodified	_VNLVATGHQSK_					0	0	0		ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	ENSG00000181433|ENST00000370709|SAGE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3201782107353	2	577.319837	1152.62512	1.1806	0.0006816	0.2624	0.00015149	1.443	0.00083309	577.3199745880967	23.4	1.8941	24.615	24.166	26.06	1.2145					127	61	5	0	0	0	0.87205	1	10274	10274		11.495	2.1116	1	25637000			39343	4576	19327	19410	45682	45682					0.05491317766245629
VNLVHASR	8	Unmodified	_VNLVHASR_					0	0	0			REV__nc|ENSG00000196923|Q9NR12-6|PDLIM7	REV__nc|ENSG00000196923|Q9NR12-6|PDLIM7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2596923708916	2	448.259051	894.503549	1.5305	0.00068607	-0.0034734	-1.557E-06	1.527	0.00068451	448.25886577583697	72.097	0.66389	72.097	71.7	72.364	0					48	20	4	0	0	0	0.89051	1	30048	30048		2.3027	0	1	8164100	+		39344	14520	19328	19411	45683	45683					0.05207740194418875
VNLVHASR	8	Unmodified	_VNLVHASR_					0	0	0			REV__nc|ENSG00000196923|Q9NR12-6|PDLIM7	REV__nc|ENSG00000196923|Q9NR12-6|PDLIM7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2599059939384	2	448.259051	894.503549	2.2974	0.0010298	-0.24129	-0.00010816	2.0561	0.00092167	448.2587884397399	71.888	0.89194	72.213	71.656	72.547	0.32494					49	27	3	0	0	0	0.89051	1	30072	30072		2.3027	0	1	8878300	+		39345	14520	19328	19411	45684	45684					0.05207740194418875
VNLVKLKHE	9	Unmodified	_VNLVKLKHE_					0	0	0		ENSG00000079557|ENST00000226355|AFM	ENSG00000079557|ENST00000226355|AFM	ENSG00000079557|ENST00000226355|AFM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3333618044853	2	540.332216	1078.64988	1.4108	0.00076229	-1.7112	-0.00092459	-0.30037	-0.0001623	540.3312259445505	70.558	0.78256	70.88	70.647	71.429	0.32223					63	24	3	0	0	0	0.83753	2	29623	29623;29739		1.8442	0.36234	1	2526700			39346	993	19329	19412	45685;45686	45685					0.11369997639667417
VNLVKLKHE	9	Unmodified	_VNLVKLKHE_					0	0	0		ENSG00000079557|ENST00000226355|AFM	ENSG00000079557|ENST00000226355|AFM	ENSG00000079557|ENST00000226355|AFM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3314697146416	2	540.332216	1078.64988	1.695	0.00091584	-1.9973	-0.0010792	-0.30236	-0.00016338	540.3311474663974	71.38	1.2424	71.704	71.399	72.641	0.32359					68	38	2	0	0	0	0.83753	1	30053	30053		1.8442	0.36234	1	1742100			39347	993	19329	19412	45687	45687					0.11369997639667417
VNLVLQWE	8	Unmodified	_VNLVLQWE_					0	0	0			REV__ENSG00000198125|ENST00000397326|MB	REV__ENSG00000198125|ENST00000397326|MB	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1863891482353	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.389	1	83.659	83.159	84.159	0.27029								0	0	0	1.0178	1	34875	34875		1.6526	0	1		+		39348	11703	19330	19413	45688	45688					0.03914357931557788
VNLVLQWE	8	Unmodified	_VNLVLQWE_					0	0	0			REV__ENSG00000198125|ENST00000397326|MB	REV__ENSG00000198125|ENST00000397326|MB	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1862975955009	3	334.18692	999.538931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.63	1	104.79	104.29	105.29	0.16055								0	0	0	1.0178	1	44377	44377		1.6526	0	1		+		39349	11703	19330	19413	45689	45689					0.03914357931557788
VNLVWRPETPH	11	Unmodified	_VNLVWRPETPH_					0	0	0			REV__ENSG00000188897|ENST00000696174|unknown	REV__ENSG00000188897|ENST00000696174|unknown	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9124938845634	3	449.910449	1346.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.012	1	53.334	52.834	53.834	0.32283								0	0	0	0.63775	1	22208	22208		0.45452	0.046251	1		+		39350	11592	19331	19414	45690	45690					0.050032685830274204
VNPEDLLTI	9	Unmodified	_VNPEDLLTI_					0	0	0			REV__tr|A0A553SFL6|A0A553SFL6_NIACITryptophan--tRNAligaseOS=NialliacirculansOX=1397GN=trpSPE=3SV=1	REV__tr|A0A553SFL6|A0A553SFL6_NIACITryptophan--tRNAligaseOS=NialliacirculansOX=1397GN=trpSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7855407595634	2	507.279315	1012.54408	2.0313	0.0010305	1.743	0.00088418	3.7743	0.0019146	507.78190681491725	58.736	1.2961	60.154	59.909	61.205	1.4181					78	41	3	0	0	0	0.086433	1	24566	24566		53.833	3.8998	1	11402000	+		39351	14710	19332	19415	45691	45691					0.03830617003529824
VNPEDLLTI	9	Unmodified	_VNPEDLLTI_					0	0	0			REV__tr|A0A553SFL6|A0A553SFL6_NIACITryptophan--tRNAligaseOS=NialliacirculansOX=1397GN=trpSPE=3SV=1	REV__tr|A0A553SFL6|A0A553SFL6_NIACITryptophan--tRNAligaseOS=NialliacirculansOX=1397GN=trpSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2811462283134	2	507.279315	1012.54408	1.4796	0.00075056	2.2259	0.0011291	3.7055	0.0018797	507.2795887907629	58.099	0.88167	60.068	59.962	60.844	1.969					65	28	3	0	0	0	0.037098	1	24442	24442		78.728	0	1	14737000	+		39352	14710	19332	19415	45692	45692					0.03830617003529824
VNPPYVYM	8	Unmodified	_VNPPYVYM_					0	0	0			REV__PIK3CA|p.Q993Kfs*33|1|0.04|ENSG00000121879|chr3:179234132-179234133|-/GAAAGTAATCCTTAAACTTCATAAC|frameshift_variant	REV__PIK3CA|p.Q993Kfs*33|1|0.04|ENSG00000121879|chr3:179234132-179234133|-/GAAAGTAATCCTTAAACTTCATAAC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1604492068291	3	328.161606	981.462989	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0482	1	2.7966	2.2966	3.2966	0.7484								0	0	0	1.0178	1	848	848		0.45834	0	1		+		39353	9597	19333	19416	45693	45693					-0.02848362240217739
VNQLVQFAQL	10	Unmodified	_VNQLVQFAQL_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.3300659060478	2	580.327131	1158.63971	1.5927	0.00092428	1.9495	0.0011314	3.5422	0.0020556	580.3284192168078	49.136	0.34378	50.527	50.359	50.703	1.3906					23	10	3	0	0	0	0.35292	1	20554	20554		36.127	4.0895	1	1084600	+		39354	9738	19334	19417	45694	45694					0.0667338991440829
VNQLVQFAQL	10	Unmodified	_VNQLVQFAQL_					0	0	0			REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	REV__nc|ENSG00000128815|Q6ZS81-2|WDFY4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	580.327131	1158.63971	1.9735	0.0011453	0.39497	0.00022921	2.3685	0.0013745	580.3276371113573	50.916	0.2199	50.916	50.787	51.007	0	0.2305	-0.00082035	NaN	36.127	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	343620	+		39355	9738	19334	19417							0.0667338991440829
VNRALEQQEAK	11	Unmodified	_VNRALEQQEAK_					0	0	0		MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	428.8961059451103	3	429.233481	1284.67861	0.27604	0.00011849	-2.423	-0.00104	-2.1469	-0.00092153	429.23249389262935	23.496	0.27318	23.496	23.352	23.625	0					13	8	2	0	0	0	0.14606	1	9796	9796		8.7518	1.7147	1	1500600			39356	7806	19335	19418	45695	45695					0.04766070478126494
VNRALEQQEAK	11	Unmodified	_VNRALEQQEAK_					0	0	0		MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MYPN|p.H226R|1|0.17|ENSG00000138347|chr10:68122115-68122115|A/G|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	429.233481	1284.67861	1.1978	0.00051415	-2.8923	-0.0012415	-1.6945	-0.00072733	429.23196733627094	22.345	0.15994	23.522	23.476	23.635	1.177	-0.037347	-0.00032632	NaN	8.7518	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308830			39357	7806	19335	19418							0.04766070478126494
VNRRPRKRK	9	Unmodified	_VNRRPRKRK_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	404.2263671755791	3	403.93029	1208.76904	0.35835	0.00014475	-1.0432	-0.0004214	-0.68489	-0.00027665	403.9296681410719	30.85	0.47433	32.133	32.028	32.502	1.2825					17	14	2	0	0	0	0.11916	1	12953	12953		0.86438	0.35842	1	454240			39358	110	19336	19419	45696	45696					0.1730062910773995
VNRRPRKRK	9	Unmodified	_VNRRPRKRK_					0	0	0		C9orf3-HIATL1|1|fusion;C9orf3-HIATL1|2|fusion;nc|ENSG00000148120|Q8N6M6-4|AOPEP;nc|ENSG00000148120|Q8N6M6-2|AOPEP;ENSG00000148120|ENST00000375315|AOPEP;ENST00000496567.5_1_9:97767442-97781734:+|nuORF;ENST00000460573.5_1_9:97767442-97823116:+|nuORF;ENST00000463372.5_1_9:97767418-97844994:+|nuORF	C9orf3-HIATL1|1|fusion	C9orf3-HIATL1|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	403.93029	1208.76904	1.3686	0.00055282	-1.9247	-0.00077746	-0.55614	-0.00022464	403.9292170307512	32.126	0.59054	32.42	32.153	32.744	0.29431	0.14371	-0.00059851	NaN	0.86438	26	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	461430			39359	110	19336	19419							0.1730062910773995
VNRRRLHV	8	Unmodified	_VNRRRLHV_					0	0	0			REV__nc|ENSG00000179846|Q17RQ9|NKPD1	REV__nc|ENSG00000179846|Q17RQ9|NKPD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3270141482353	2	525.325591	1048.63663	2.8271	0.0014852	-1.581	-0.00083052	1.2462	0.00065464	525.3246864757799	91.773	0.38869	91.963	91.755	92.144	0.19041					28	11	3	0	0	0	0.89178	1	38466	38466		0.69038	0	1	1688600	+		39360	11285	19337	19420	45697	45697					0.11425604370924702
VNSKDLQHIW	10	Unmodified	_VNSKDLQHIW_					0	0	0		UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant;ENSG00000175931|ENST00000319380|UBE2O	UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.8701660037041	2	620.327662	1238.64077	1.0453	0.00064841	0.52849	0.00032784	1.5738	0.00097625	620.328605557683	77.7	0.18224	79.452	79.407	79.59	1.7514					8	5	2	0	0	0	0.12493	1	32611	32611		6.7232	2.3939	1	2132200			39361	4390	19338	19421	45698	45698					0.03099604283329427
VNSLFNRSFN	10	Unmodified	_VNSLFNRSFN_					0	0	0		ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3060790896416	2	599.304187	1196.59382	2.3057	0.0013818	0.60927	0.00036514	2.915	0.001747	599.8062879187784	58.096	0.25635	58.419	58.236	58.492	0.32299					19	7	3	0	0	0	0.80011	1	24318	24318		12.241	2.1667	1	665490			39362	985	19339	19422	45699	45699					0.0033874473219839274
VNSLFNRSFN	10	Unmodified	_VNSLFNRSFN_					0	0	0		ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3046142458916	2	599.304187	1196.59382	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.932	1	58.347	57.847	58.847	1.4145								0	0	0	0.64675	1	23861	23861		17.113	1.2657	1				39363	985	19339	19422	45700	45700					0.0033874473219839274
VNSLFNRSFN	10	Unmodified	_VNSLFNRSFN_					0	0	0		ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	ENSG00000079101|ENST00000692774|CLUL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	599.304187	1196.59382	2.3192	0.0013899	-1.0108	-0.00060577	1.3084	0.00078412	599.3040377122347	58.574	0.26071	58.574	58.428	58.689	0	0.077592	-0.0012739	NaN	12.241	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	595570			39364	985	19339	19422							0.0033874473219839274
VNTIPALA	8	Unmodified	_VNTIPALA_					0	0	0		nc|ENSG00000102468|P28223-2|HTR2A;ENSG00000102468|ENST00000542664|HTR2A	nc|ENSG00000102468|P28223-2|HTR2A	nc|ENSG00000102468|P28223-2|HTR2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7391540408134	2	399.739628	797.464704	1.427	0.00057042	-2.7817	-0.001112	-1.3548	-0.00054155	399.738569423991	67.583	0.5775	68.961	68.665	69.242	1.3778					46	18	4	0	0	0	0.88504	1	28341	28341		5.7604	0	1	11716000			39365	1393	19340	19423	45701	45701					0.05787014840041138
VNVLGKRN	8	Unmodified	_VNVLGKRN_					0	0	0		ENST00000562919.1_1_4:113152035-113152410:-|nuORF	ENST00000562919.1_1_4:113152035-113152410:-|nuORF	ENST00000562919.1_1_4:113152035-113152410:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	450.1767455935478	2	450.274701	898.534849	2.842	0.0012797	-0.54925	-0.00024732	2.2928	0.0010324	450.27427004922237	76.175	1.3392	76.496	75.925	77.264	0.32163					108	42	5	0	0	0	2.3239	1	31688	31688		0.69038	0	1	239710000			39366	7338	19341	19424	45702	45702					0.08152313228515595
VNVLLDTL	8	Unmodified	_VNVLLDTL_					0	0	0			REV__nc|ENSG00000037280|P35916-1|FLT4	REV__nc|ENSG00000037280|P35916-1|FLT4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	444.2958557009697	2	443.765843	885.517133	1.9996	0.00088735	3.6916	0.0016382	5.6912	0.0025255	443.7676880939054	64.898	0.53487	66.806	66.403	66.938	1.9085					22	16	2	0	0	0	2.3239	1	27186	27186		2.5775	0	1	768980	+		39367	8585	19342	19425	45703	45703					0.06979553183009557
VNVTLPVG	8	Unmodified	_VNVTLPVG_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-4|DLC1	REV__nc|ENSG00000164741|Q96QB1-4|DLC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.7391235232353	2	399.739628	797.464704	0.12441	4.9732E-05	-1.9592	-0.00078317	-1.8348	-0.00073344	399.73916879368096	67.742	0.684	67.742	67.231	67.915	0					50	21	3	0	0	0	0.88663	1	28256	28256		4.756	0	1	5696600	+		39368	10747	19343	19426	45704	45704					0.05787014840052507
VNVTLPVG	8	Unmodified	_VNVTLPVG_					0	0	0			REV__nc|ENSG00000164741|Q96QB1-4|DLC1	REV__nc|ENSG00000164741|Q96QB1-4|DLC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	399.739628	797.464704	1.5825	0.00063259	-3.7293	-0.0014907	-2.1468	-0.00085816	399.738355195234	66.216	0.83221	68.105	67.509	68.341	1.8889	0.18582	-0.00040268	NaN	4.756	55	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4282600	+		39369	10747	19343	19426							0.05787014840052507
VPAAPTKA	8	Unmodified	_VPAAPTKA_					0	0	0		nc|ENSG00000134668|Q6ZMY3-3|SPOCD1;nc|ENSG00000134668|Q6ZMY3-2|SPOCD1;ENSG00000134668|ENST00000360482|SPOCD1	nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	nc|ENSG00000134668|Q6ZMY3-3|SPOCD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.7260009646416	2	377.726521	753.438489	2.0909	0.0007898	-2.8178	-0.0010644	-0.7269	-0.00027457	377.7250264475004	63.126	0.91487	64.54	63.838	64.753	1.4134					54	29	3	0	0	0	0.89176	1	26444	26444		0.79363	0	1	3478500			39370	2628	19344	19427	45705	45705					0.05190745668551244
VPAGGGGH	8	Unmodified	_VPAGGGGH_					0	0	0			REV__ENSG00000115844|ENST00000234198|DLX2	REV__ENSG00000115844|ENST00000234198|DLX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	651.3226196169853	1	651.320899	650.313623	1.8672	0.0012162	-0.66055	-0.00043023	1.2067	0.00078595	651.3212371427129	70.492	0.91625	70.492	70.056	70.972	0					50	29	2	0	0	0	0.88958	2	29250	29250;29302		2.8892	2.0956	1	1876100	+		39371	9459	19345	19428	45706;45707	45706					-0.025521267479575727
VPAIVKKPI	9	Unmodified	_VPAIVKKPI_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.2227661013603	3	322.223306	963.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.81	1	69.132	68.632	69.632	0.32224								0	0	0	0.42693	1	28803	28803		0	0	1		+		39372	11838	19346	19429	45708	45708					0.1648098862168581
VPAIVKKPI	9	Unmodified	_VPAIVKKPI_					0	0	0			REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	REV__nc|ENSG00000213471|A6NNM8-2|TTLL13	MSMS	GG20161007_CRH_Patient100_A02_02	2	322.2225524783134	3	322.223306	963.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.323	1	93.492	92.992	93.992	0.16835								0	0	0	0.42693	1	39070	39070		0	0	1		+		39373	11838	19346	19429	45709	45709					0.1648098862168581
VPAKAIAR	8	Unmodified	_VPAKAIAR_					0	0	0		APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	825.5327636599541	1	825.530498	824.523222	2.8457	0.0023492	-1.163	-0.00096012	1.6826	0.0013891	825.5303398966488	106.6	0.15987	106.76	106.68	106.84	0.15781					19	7	4	0	0	0	0.89198	1	45686	45686		0	0	1	49065000			39374	69	19347	19430	45710	45710					0.10394116205168302
VPAKAIAR	8	Unmodified	_VPAKAIAR_					0	0	0		APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	APBB3|p.S241R|1|0.43|ENSG00000113108|chr5:140561611-140561611|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	825.5322753787041	1	825.530498	824.523222	2.9818	0.0024615	-0.32999	-0.00027241	2.6518	0.0021891	825.530308336316	106.61	0.14651	106.77	106.67	106.82	0.16174					22	7	4	0	0	0	0.89198	1	45616	45616		0	0	1	63621000			39375	69	19347	19430	45711	45711					0.10394116205168302
VPALASLVL	9	Unmodified	_VPALASLVL_					0	0	0			REV__ENSG00000164849|ENST00000444847|GPR146	REV__ENSG00000164849|ENST00000444847|GPR146	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	882.5691406130791	1	882.565881	881.558604	3.3891	0.0029911	-0.8553	-0.00075485	2.5338	0.0022363	882.5651579899471	73.918	0.47195	75.236	74.966	75.438	1.318					33	14	3	0	0	0	0.04206	1	31078	31078		74.396	0	1	8383800	+		39376	10751	19348	19431	45712	45712					0.11308733942325944
VPALASLVL	9	Unmodified	_VPALASLVL_					0	0	0			REV__ENSG00000164849|ENST00000444847|GPR146	REV__ENSG00000164849|ENST00000444847|GPR146	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	441.7881652712822	2	441.786579	881.558604	3.7404	0.0016525	-0.87834	-0.00038804	2.8621	0.0012644	441.78628187795636	73.886	0.37516	75.204	75.03	75.405	1.318					34	11	4	0	0	0	0.11911	1	31079	31079		42.968	8.7807	1	6420200	+		39377	10751	19348	19431	45713	45713					0.11308733942325944
VPALASLVL	9	Unmodified	_VPALASLVL_					0	0	0			REV__ENSG00000164849|ENST00000444847|GPR146	REV__ENSG00000164849|ENST00000444847|GPR146	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.7878600955009	2	441.786579	881.558604	2.7849	0.0012303	-0.40534	-0.00017907	2.3796	0.0010513	441.78667841740526	73.388	0.40325	75.184	74.974	75.377	1.7962					30	12	3	0	0	0	0.070759	1	30789	30789		59.795	7.1021	1	4245900	+		39378	10751	19348	19431	45714	45714					0.11308733942325944
VPALASLVL	9	Unmodified	_VPALASLVL_					0	0	0			REV__ENSG00000164849|ENST00000444847|GPR146	REV__ENSG00000164849|ENST00000444847|GPR146	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	441.786579	881.558604	3.7404	0.0016525	-0.87834	-0.00038804	2.8621	0.0012644	441.78628187795636	73.886	0.37516	75.204	75.03	75.405	1.318	0.010003	-0.00014835	NaN	59.795	34	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6420200	+		39379	10751	19348	19431							0.11308733942325944
VPALFLVA	8	Unmodified	_VPALFLVA_					0	0	0			REV__ENST00000496692.6_1_1:161551173-161559386:+|nuORF	REV__ENST00000496692.6_1_1:161551173-161559386:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2633239626884	2	415.262739	828.510926	1.294	0.00053734	-0.10749	-4.4636E-05	1.1865	0.00049271	415.26254243666665	89.211	0.82554	89.211	88.732	89.558	0					49	25	3	0	0	0	0.89176	1	37253	37253		0.79363	0	1	3517000	+		39380	8741	19349	19432	45715	45715					0.08981079742113707
VPALFLVA	8	Unmodified	_VPALFLVA_					0	0	0			REV__ENST00000496692.6_1_1:161551173-161559386:+|nuORF	REV__ENST00000496692.6_1_1:161551173-161559386:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2622558474541	2	415.262739	828.510926	1.2268	0.00050946	-0.087868	-3.6488E-05	1.139	0.00047297	415.26255053272064	89.824	0.79404	89.824	89.588	90.382	0					49	24	3	0	0	0	0.89176	2	37500	37500;37588		0.79363	0	1	4106800	+		39381	8741	19349	19432	45716;45717	45716					0.08981079742113707
VPAPAAAAL	9	Unmodified	_VPAPAAAAL_					0	0	0			REV__ENST00000603791.1_1_6:3751383-3751677:+|nuORF	REV__ENST00000603791.1_1_6:3751383-3751677:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	2	390.734346	779.454139	-0.047192	-1.844E-05	-3.9894	-0.0015588	-4.0366	-0.0015773	390.7328762712635	65.882	0.28403	65.882	65.708	65.992	0					12	8	2	0	0	0	0.11957	1	27458	27458		0	0	1	603540	+		39382	14128	19350	19433	45718	45718					0.0555903218559024
VPAPAAAAL	9	Unmodified	_VPAPAAAAL_					0	0	0			REV__ENST00000603791.1_1_6:3751383-3751677:+|nuORF	REV__ENST00000603791.1_1_6:3751383-3751677:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	390.734346	779.454139	1.9352	0.00075614	-4.7269	-0.001847	-2.7918	-0.0010908	390.7327986019924	65.679	0.28305	66.006	65.833	66.116	0.32689	0.062079	-0.00036797	NaN	0	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	792200	+		39383	14128	19350	19433							0.0555903218559024
VPASSLEIML	10	Unmodified	_VPASSLEIML_					0	0	0			REV__ENST00000564975.5_1_16:68087487-68087562:+|nuORF	REV__ENST00000564975.5_1_16:68087487-68087562:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2951537966728	2	530.291368	1058.56818	2.7315	0.0014485	3.8935	0.0020647	6.6251	0.0035132	530.2950033443691	69.903	0.62675	71.257	70.957	71.584	1.3536					48	19	3	0	0	0	0.80568	1	29403	29403		11.64	0.81637	1	6350800	+		39384	13927	19351	19434	45719	45719					0.04124134165522264
VPCMCVYC	8	Unmodified	_VPCMCVYC_					0	0	0		SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1732665896416	2	459.173038	916.331523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.452	1	70.322	69.822	70.822	1.87								0	0	0	1.0178	1	28717	28717		2.8892	0	1				39385	16005	19352	19435	45720	45720					-0.1299895519563279
VPCMCVYC	8	Unmodified	_VPCMCVYC_					0	0	0		SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1728088259697	2	459.173038	916.331523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.61	1	70.463	69.963	70.963	1.853								0	0	0	1.0178	1	28784	28784		2.8892	0	1				39386	16005	19352	19435	45721	45721					-0.1299895519563279
VPCMCVYC	8	Unmodified	_VPCMCVYC_					0	0	0		SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	SPRED1|p.C418_C419insVY|1|0.03|ENSG00000166068|chr15:38351582-38351583|-/CGTATA|inframe_insertion	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1725952029228	2	459.173038	916.331523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.755	1	70.608	70.108	71.108	1.853								0	0	0	1.0178	1	28847	28847		2.8892	0	1				39387	16005	19352	19435	45722	45722					-0.1299895519563279
VPCPHPGS	8	Unmodified	_VPCPHPGS_					0	0	0			REV__nc|ENSG00000283787|A8MZF0|PRR33	REV__nc|ENSG00000283787|A8MZF0|PRR33	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.1861450076103	2	397.186706	792.358859	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.05	1	100.05	99.548	100.55	0								0	0	0	1.0178	1	41883	41883		0.69038	0	1		+		39388	12034	19353	19436	45723	45723					-0.04562644277075378
VPDDILQLL	9	Unmodified	_VPDDILQLL_					0	0	0		DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;nc|ENSG00000167261|Q9H4A9-2|DPEP2;ENSG00000167261|ENST00000393847|DPEP2;chr16:67977351-67977653|97|52.73|0.15|8.45|-|0|None,DPEP3|1;ENST00000575203.5_1_16:68021908-68024822:-|nuORF	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1025.596362292767	1	1025.58774	1024.58046	3.5132	0.0036031	1.1358	0.0011649	4.649	0.004768	1025.591124078122	91.848	0.37083	92.785	92.648	93.019	0.93623					15	11	2	0	0	0	0.018723	2	38680	38680;38729		100.37	22.222	1	1973700			39389	426	19354	19437	45724;45725	45724					0.06915493900260117
VPDDILQLL	9	Unmodified	_VPDDILQLL_					0	0	0		DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;nc|ENSG00000167261|Q9H4A9-2|DPEP2;ENSG00000167261|ENST00000393847|DPEP2;chr16:67977351-67977653|97|52.73|0.15|8.45|-|0|None,DPEP3|1;ENST00000575203.5_1_16:68021908-68024822:-|nuORF	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2989379763603	2	513.297507	1024.58046	4.4345	0.0022762	-1.6336	-0.00083852	2.8009	0.0014377	513.2966767033889	91.909	0.49654	92.846	92.617	93.114	0.93623					39	15	3	0	0	0	0.10993	2	38702	38702;38759		46.021	1.4843	1	4412800			39390	426	19354	19437	45726;45727	45726					0.06915493900260117
VPDDILQLL	9	Unmodified	_VPDDILQLL_					0	0	0		DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;nc|ENSG00000167261|Q9H4A9-2|DPEP2;ENSG00000167261|ENST00000393847|DPEP2;chr16:67977351-67977653|97|52.73|0.15|8.45|-|0|None,DPEP3|1;ENST00000575203.5_1_16:68021908-68024822:-|nuORF	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1025.595507800579	1	1025.58774	1024.58046	3.5741	0.0036656	3.2475	0.0033306	6.8217	0.0069962	1025.5916213565192	91.393	0.27698	92.759	92.686	92.963	1.366					14	8	2	0	0	0	0.026628	1	38493	38493		92.822	14.673	1	1607200			39391	426	19354	19437	45728	45728					0.06915493900260117
VPDDILQLL	9	Unmodified	_VPDDILQLL_					0	0	0		DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant;ENSG00000141096|ENST00000268793|DPEP3;nc|ENSG00000167261|Q9H4A9-2|DPEP2;ENSG00000167261|ENST00000393847|DPEP2;chr16:67977351-67977653|97|52.73|0.15|8.45|-|0|None,DPEP3|1;ENST00000575203.5_1_16:68021908-68024822:-|nuORF	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	DPEP3|p.L408Nfs*3|1|0.04|ENSG00000141096|chr16:67976176-67976177|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2992431521416	2	513.297507	1024.58046	3.6525	0.0018748	-1.1774	-0.00060436	2.4751	0.0012705	513.2969826692429	91.385	0.46597	92.751	92.627	93.093	1.366					34	14	3	0	0	0	0.083604	1	38532	38532		54.774	16.8	1	3936600			39392	426	19354	19437	45729	45729					0.06915493900260117
VPDESVPVL	9	Unmodified	_VPDESVPVL_					0	0	0			REV__ENSG00000103194|ENST00000219473|USP10	REV__ENSG00000103194|ENST00000219473|USP10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	954.5191528201103	1	954.514239	953.506963	2.5985	0.0024803	-0.59082	-0.00056395	2.0077	0.0019163	954.5143372690037	86.423	1.1718	87.55	86.816	87.987	1.1265					88	46	4	0	0	0	0.34572	1	36520	36520		23.148	0	1	22208000	+		39393	9097	19355	19438	45730	45730					0.028349454577551114
VPDHVVWSL	9	Unmodified	_VPDHVVWSL_					0	0	0		ENST00000505282.1_1_4:66959972-66960239:+|nuORF;ENSG00000185885|ENST00000408968|IFITM1;ENSG00000185201|ENST00000616316|IFITM2;ENSG00000142089|ENST00000399808|IFITM3	ENST00000505282.1_1_4:66959972-66960239:+|nuORF	ENST00000505282.1_1_4:66959972-66960239:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	525.7664062380791	2	526.282192	1050.54983	1.1244	0.00059174	-2.6459	-0.0013925	-1.5215	-0.00080073	526.2801430760672	52.703	0.31213	54.675	54.448	54.76	1.9722					22	9	3	0	0	0	0.033576	1	22100	22100		54.774	8.7526	1	4106700			39394	2982	19356	19439	45731	45731					0.026577603058512977
VPDMIYNFL	9	Unmodified	_VPDMIYNFL_					0	0	0			REV__tr|A0A7D7AEY7|A0A7D7AEY7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04015PE=4SV=1	REV__tr|A0A7D7AEY7|A0A7D7AEY7_9CLOTTetR/AcrRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_04015PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2772704958916	2	556.27826	1110.54197	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.23	1	43.57	43.07	44.07	1.3399								0	0	0	0.36184	1	17705	17705		12.532	0	1		+		39395	15916	19357	19440	45732	45732					-0.008881350059482429
VPDPNVIKL	9	Unmodified	_VPDPNVIKL_					0	0	0		SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENSG00000157349|ENST00000288071|DDX19B	SF3B3-DDX19B|4|fusion	SF3B3-DDX19B|4|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.7996703982353	2	497.800217	993.585882	2.0451	0.0010181	-2.3453	-0.0011675	-0.3002	-0.00014944	497.7987739792082	43.842	0.58356	45.196	44.886	45.47	1.3536					31	18	2	0	0	0	0.046715	2	18373	18373;18447		70.332	38.453	1	1783600			39396	15952	19358	19441	45733;45734	45733					0.0888321748270755
VPDPNVIKL	9	Unmodified	_VPDPNVIKL_					0	0	0		SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion;SF3B3-DDX19B|2|fusion;SF3B3-DDX19B|3|fusion;ENST00000569319.5_1_16:70399881-70405886:+|nuORF;ENST00000569771.5_1_16:70395504-70405886:+|nuORF;ENST00000562140.2_1_16:70398455-70404584:+|nuORF;nc|ENSG00000260537|Q9UMR2-3|DDX19B;nc|ENSG00000168872|Q9NUU7-2|DDX19A;nc|ENSG00000260537|Q9UMR2-2|DDX19B;nc|ENSG00000260537|Q9UMR2-4|DDX19B;ENSG00000168872|ENST00000302243|DDX19A;ENSG00000157349|ENST00000288071|DDX19B	SF3B3-DDX19B|4|fusion	SF3B3-DDX19B|4|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.8005859255791	2	497.800217	993.585882	1.8729	0.00093233	-0.028409	-1.4142E-05	1.8445	0.00091819	497.79962608104967	43.223	0.41609	45.167	44.923	45.339	1.9438					28	13	3	0	0	0	0.081597	2	18133	18081;18133		55.503	31.867	1	1325300			39397	15952	19358	19441	45735;45736	45736					0.0888321748270755
VPDSSGPERIL	11	Unmodified	_VPDSSGPERIL_					0	0	0		nc|ENSG00000165119|P61978|HNRNPK;HNRNPK|p.Y280Mfs*4|1|0.05|ENSG00000165119|chr9:83971997-83971997|A/-|frameshift_variant;nc|ENSG00000165119|P61978-3|HNRNPK;ENSG00000165119|ENST00000376263|HNRNPK;HNRNPK-PTMS|1|fusion	nc|ENSG00000165119|P61978|HNRNPK	nc|ENSG00000165119|P61978|HNRNPK	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3114501833916	2	585.311677	1168.6088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.106	1	31.389	30.889	31.889	1.2825								0	0	0	0.63764	1	12634	12634		18.721	6.1897	1				39398	7914	19359	19442	45737	45737					0.031241918095247456
VPDWGTLL	8	Unmodified	_VPDWGTLL_					0	0	0		tr|A0A553SUT1|A0A553SUT1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_07000PE=3SV=1	tr|A0A553SUT1|A0A553SUT1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_07000PE=3SV=1	tr|A0A553SUT1|A0A553SUT1_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_07000PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	450.7462036013603	2	450.744911	899.475269	2.8305	0.0012758	-1.0147	-0.00045737	1.8158	0.00081847	450.74436816046995	50.075	0.32043	51.467	51.292	51.613	1.3911					17	9	2	0	0	0	0.87276	1	20979	20979		13.508	1.8676	1	1895200			39399	16707	19360	19443	45738	45738					0.021509974944933674
VPEDKIFLL	9	Unmodified	_VPEDKIFLL_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3171874880791	2	537.3157	1072.61685	3.028	0.001627	-0.018217	-9.7882E-06	3.0098	0.0016172	537.3158161149677	62.346	0.43503	63.763	63.556	63.992	1.4177					30	13	3	0	0	0	0.1388	2	26127	26127;26177		39.95	10.547	1	1894900			39400	5047	19361	19444	45739;45740	45739					0.08344370796953626
VPEDKIFLL	9	Unmodified	_VPEDKIFLL_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3171264529228	2	537.3157	1072.61685	2.7782	0.0014928	0.74421	0.00039988	3.5224	0.0018927	537.31637925767	61.768	0.41068	63.725	63.497	63.908	1.9571					28	12	3	0	0	0	0.20244	1	25902	25902		32.786	7.3864	1	1488600			39401	5047	19361	19444	45741	45741					0.08344370796953626
VPEEEKFTI	9	Unmodified	_VPEEEKFTI_					0	0	0			REV__nc|ENSG00000197451|Q99729-3|HNRNPAB	REV__nc|ENSG00000197451|Q99729-3|HNRNPAB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.3066894412041	2	546.284597	1090.55464	2.0858	0.0011394	4.3485	0.0023755	6.4343	0.003515	546.7892406098658	71.281	0.54366	72.622	72.392	72.936	1.3415					45	17	4	0	0	0	0.094078	1	29820	29820		18.135	4.2289	1	4765400	+		39402	11675	19362	19445	45742	45742					0.012985996579573111
VPEGLLATVTV	11	Unmodified	_VPEGLLATVTV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1;ENSG00000105409|ENST00000648268|ATP1A3;nc|ENSG00000105409|P13637-2|ATP1A3;nc|ENSG00000105409|P13637-3|ATP1A3;ENSG00000132681|ENST00000368081|ATP1A4;ENST00000485672.2_1_19:42488766-42489464:-|nuORF;ENSG00000075673|ENST00000381946|ATP12A;nc|ENSG00000075673|P54707-2|ATP12A;ENSG00000105675|ENST00000262623|ATP4A	nc|ENSG00000163399|P05023-3|ATP1A1;ENSG00000105675|ENST00000262623|ATP4A	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8262206912041	2	549.823889	1097.63323	2.7011	0.0014851	0.12276	6.7498E-05	2.8238	0.0015526	549.8244901425817	70.312	0.41495	71.666	71.491	71.906	1.3536					29	12	3	0	0	0	0.37492	1	29505	29505		27.629	9.4825	1	2053500			39403	3677;1533	19363	19446	45743	45743					0.08831451963033032
VPEKTWREFR	10	Unmodified	_VPEKTWREFR_					0	0	0		nc|ENSG00000274355|Q4VXF1|FAM74A3;nc|ENSG00000277260|A6NL05|FAM74A7	nc|ENSG00000274355|Q4VXF1|FAM74A3	nc|ENSG00000274355|Q4VXF1|FAM74A3	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9130126833916	3	449.910449	1346.70952	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.287	1	13.075	12.575	13.575	0.78751								0	0	0	0.66222	1	5100	5100		0.69767	0	1				39404	8016	19364	19447	45744	45744					0.05003268583004683
VPELTLTP	8	Unmodified	_VPELTLTP_					0	0	0			REV__ENSG00000136695|ENST00000393200|IL36RN	REV__ENSG00000136695|ENST00000393200|IL36RN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.2523681521416	2	435.252569	868.490584	2.8066	0.0012216	-2.4218	-0.0010541	0.38478	0.00016748	435.25154824439994	73.833	1.1209	74.158	73.525	74.646	0.32494					67	35	3	0	0	0	0.88504	1	30946	30946		5.7604	0	1	2944100	+		39405	9986	19365	19448	45745	45745					0.05107864291653641
VPELTLTP	8	Unmodified	_VPELTLTP_					0	0	0			REV__ENSG00000136695|ENST00000393200|IL36RN	REV__ENSG00000136695|ENST00000393200|IL36RN	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	435.252569	868.490584	2.8066	0.0012216	-2.4218	-0.0010541	0.38478	0.00016748	435.25154824439994	73.833	1.1209	74.158	73.525	74.646	0.32494	-0.05238	0.0002142	NaN	5.7604	67	35	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2944100	+		39406	9986	19365	19448							0.05107864291653641
VPELTLTP	8	Unmodified	_VPELTLTP_					0	0	0			REV__ENSG00000136695|ENST00000393200|IL36RN	REV__ENSG00000136695|ENST00000393200|IL36RN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	435.252569	868.490584	3.6255	0.001578	-3.8448	-0.0016735	-0.21933	-9.5466E-05	435.25070444395664	72.943	0.7123	74.273	73.762	74.474	1.3297	0.062343	-0.0010246	NaN	5.7604	46	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1988400	+		39407	9986	19365	19448							0.05107864291653641
VPELTLTP	8	Unmodified	_VPELTLTP_					0	0	0			REV__ENSG00000136695|ENST00000393200|IL36RN	REV__ENSG00000136695|ENST00000393200|IL36RN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	435.252569	868.490584	2.7605	0.0012015	-2.7602	-0.0012014	0.00029894	1.3012E-07	435.25124665167425	72.565	0.59338	74.375	73.981	74.574	1.8101	0.16505	-8.0405E-05	NaN	5.7604	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2022500	+		39408	9986	19365	19448							0.05107864291653641
VPESSLAGHSF	11	Unmodified	_VPESSLAGHSF_					0	0	0		ENST00000397898.7_1_21:46226868-46228953:-|nuORF;ENSG00000184900|ENST00000332859|SUMO3;nc|ENSG00000184900|P55854-2|SUMO3	ENST00000397898.7_1_21:46226868-46228953:-|nuORF	ENST00000397898.7_1_21:46226868-46228953:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7768432497978	2	565.77747	1129.54039	1.0124	0.00057281	0.28956	0.00016383	1.302	0.00073663	565.7774724174819	28.833	0.27404	30.115	29.978	30.252	1.2825					14	8	2	0	0	0	0.05109	1	12071	12071		66.457	32.055	1	1140400			39409	4715	19366	19449	45746	45746					-0.019200527703333137
VPESSLAGHSF	11	Unmodified	_VPESSLAGHSF_					0	0	0		ENST00000397898.7_1_21:46226868-46228953:-|nuORF;ENSG00000184900|ENST00000332859|SUMO3;nc|ENSG00000184900|P55854-2|SUMO3	ENST00000397898.7_1_21:46226868-46228953:-|nuORF	ENST00000397898.7_1_21:46226868-46228953:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.7773315310478	2	565.77747	1129.54039	0.76081	0.00043045	-0.75296	-0.00042601	0.0078508	4.4418E-06	565.7768933996521	28.268	0.36349	30.043	29.85	30.213	1.7754					18	11	2	0	0	0	0.019302	1	11847	11847		99.755	70.674	1	1046100			39410	4715	19366	19449	45747	45747					-0.019200527703333137
VPFANSIGALV	11	Unmodified	_VPFANSIGALV_					0	0	0		ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3110229372978	2	544.310949	1086.60735	2.3892	0.0013004	-1.4169	-0.00077126	0.97222	0.00052919	544.3100329703734	82.92	0.52513	84.59	84.265	84.79	1.67					26	16	2	0	0	0	0.37492	1	34808	34808		27.629	1.3607	1	5287200			39411	5407	19367	19450	45748	45748					0.06750602511419856
VPFANSIGALV	11	Unmodified	_VPFANSIGALV_					0	0	0		ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	544.310949	1086.60735	2.4806	0.0013502	0.92915	0.00050574	3.4097	0.001856	544.3112047098207	84.302	0.38164	84.563	84.28	84.662	0.26083	-0.08468	0.00087246	NaN	27.629	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	749130			39412	5407	19367	19450							0.06750602511419856
VPFANSIGALV	11	Unmodified	_VPFANSIGALV_					0	0	0		ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	ENSG00000256870|ENST00000536262|SLC5A8	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	544.310949	1086.60735	1.9703	0.0010724	1.4782	0.00080459	3.4485	0.001877	544.3115248216285	83.453	0.44158	84.641	84.326	84.767	1.1879	-0.0069334	0.0014702	NaN	27.629	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5236800			39413	5407	19367	19450							0.06750602511419856
VPFIIAAV	8	Unmodified	_VPFIIAAV_					0	0	0			REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2634155154228	2	415.262739	828.510926	2.8384	0.0011787	-0.84512	-0.00035095	1.9933	0.00082774	415.26219494873794	88.473	0.50487	88.707	88.477	88.982	0.23471					41	15	3	0	0	0	0.89176	1	37101	37101		0.79363	0	1	3664000	+		39414	8807;11580	19368	19451	45749	45749					0.08981079742125075
VPFIIAAV	8	Unmodified	_VPFIIAAV_					0	0	0			REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2631103396416	2	415.262739	828.510926	1.9419	0.00080639	-0.15473	-6.4254E-05	1.7872	0.00074214	415.26211582123284	84.856	0.42954	86.015	85.749	86.179	1.159					29	13	3	0	0	0	0.89176	1	35626	35626		0.79363	0	1	2341800	+		39415	8807;11580	19368	19451	45750	45750					0.08981079742125075
VPFIIAAV	8	Unmodified	_VPFIIAAV_					0	0	0			REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	415.262739	828.510926	2.1166	0.00087894	-1.995	-0.00082843	0.12162	5.0506E-05	415.2618196665433	84.214	0.45354	85.815	85.553	86.006	1.6002	-0.10037	-0.00054572	NaN	0.79363	23	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2251100	+		39416	8807;11580	19368	19451							0.08981079742125075
VPFKKGLI	8	Unmodified	_VPFKKGLI_					0	0	0			REV__ENST00000440465.1_1_10:36811746-36813066:-|nuORF	REV__ENST00000440465.1_1_10:36811746-36813066:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1990844607353	3	301.200501	900.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.891	1	42.891	42.391	43.391	0								0	0	0	1.0178	1	17951	17951		0	0	1		+		39417	9191	19369	19452	45751	45751					0.12540744041859853
VPFLKDVYIFL	11	Unmodified	_VPFLKDVYIFL_					0	0	0		ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2686950564384	3	451.93208	1352.77441	1.4202	0.00064184	2.7606	0.0012476	4.1808	0.0018894	452.2678621301343	97.181	0.20961	97.181	97.019	97.228	0					8	6	2	0	0	0	1.0362	1	40636	40636		0.45452	0.046251	1	2904700			39418	6593	19370	19453	45752	45752					0.11213450336299502
VPFLKDVYIFL	11	Unmodified	_VPFLKDVYIFL_					0	0	0		ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	451.93208	1352.77441	3.2861	0.0014851	1.8404	0.00083172	5.1265	0.0023168	451.9330343960486	97.148	0.12295	97.239	97.149	97.272	0.090881	0.047664	-0.001031	NaN	0.45452	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1234800			39419	6593	19370	19453							0.11213450336299502
VPFLKDVYIFL	11	Unmodified	_VPFLKDVYIFL_					0	0	0		ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	ENST00000448507.5_1_4:7033984-7034191:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	451.93208	1352.77441	3.4515	0.0015598	3.3312	0.0015055	6.7827	0.0030653	451.9332630525092	96.847	0.15767	97.153	97.069	97.227	0.3062	-0.038141	0.00099029	NaN	0.45452	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	729010			39420	6593	19370	19453							0.11213450336299502
VPFTVRQPV	9	Unmodified	_VPFTVRQPV_					0	0	0			REV__nc|ENSG00000162391|Q8WW52-2|FAM151A	REV__nc|ENSG00000162391|Q8WW52-2|FAM151A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2048217654228	3	348.206315	1041.59712	0.39261	0.00013671	0.52159	0.00018162	0.9142	0.00031833	348.20622737833367	30.824	0.90298	32.639	32.358	33.261	1.8151					69	30	3	0	0	0	0.77876	1	13054	13054		4.1895	1.4543	1	8107700	+		39421	10641	19371	19454	45753	45753					0.0779803957684635
VPFVKFLK	8	Unmodified	_VPFVKFLK_					0	0	0		ENST00000513811.5_1_4:15471657-15545375:+|nuORF;ENST00000514450.2_1_4:15471657-15513157:+|nuORF	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	489.3152953982353	2	489.312764	976.610974	1.6309	0.00079803	0.71673	0.0003507	2.3476	0.0011487	489.31312168763304	79.04	0.88318	79.04	78.662	79.545	0					96	28	5	0	0	0	0.89198	2	32801	32801;33015		0	0	1	204060000			39422	7046	19372	19455	45754;45755	45754					0.12173317075951218
VPFVKFLK	8	Unmodified	_VPFVKFLK_					0	0	0		ENST00000513811.5_1_4:15471657-15545375:+|nuORF;ENST00000514450.2_1_4:15471657-15513157:+|nuORF	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	ENST00000513811.5_1_4:15471657-15545375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	489.3139831423759	2	489.312764	976.610974	2.3932	0.001171	0.64483	0.00031552	3.038	0.0014866	489.31311809386244	78.873	0.73534	79.182	78.769	79.505	0.30933					82	23	5	0	0	0	0.89198	3	32953	32953;33045;33093		0	0	1	172780000			39423	7046	19372	19455	45756;45757;45758	45756					0.12173317075951218
VPGCPATE	8	Unmodified	_VPGCPATE_					0	0	0		ZNF212|p.I39Mfs*40|1|0.06|ENSG00000170260|chr7:149250250-149250251|-/G|frameshift_variant;ENST00000335870.6_1_7:148936793-148947455:+|nuORF	ZNF212|p.I39Mfs*40|1|0.06|ENSG00000170260|chr7:149250250-149250251|-/G|frameshift_variant	ZNF212|p.I39Mfs*40|1|0.06|ENSG00000170260|chr7:149250250-149250251|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	387.1803466677666	2	387.178546	772.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.57	1	104.62	104.12	105.12	0.056801								0	0	0	1.0178	1	44130	44130		0.69038	0	1				39424	5912	19373	19456	45759	45759					-0.052737702338276904
VPGDSGCC	8	Unmodified	_VPGDSGCC_					0	0	0		nc|ENSG00000204613|Q9UDY6-2|TRIM10	nc|ENSG00000204613|Q9UDY6-2|TRIM10	nc|ENSG00000204613|Q9UDY6-2|TRIM10	MSMS	GG20161007_CRH_Patient100_A02_02	2	369.1338378787041	2	369.133282	736.25201	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.27	1	104.33	103.83	104.83	0.059502								0	0	0	1.0178	1	43930	43930		0.69038	0	1				39425	7980	19374	19457	45760	45760					-0.12666562553761196
VPGGGCQD	8	Unmodified	_VPGGGCQD_					0	0	0		DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	DSP|p.R1308Pfs*18|1|0.56|ENSG00000096696|chr6:7580109-7580110|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	367.2702819705009	2	366.652696	731.290839	1.8094	0.0006634	-3.4533	-0.0012662	-1.644	-0.00060277	366.65144222782135	82.882	0.39729	84.095	83.889	84.286	1.2125					22	12	2	0	0	0	2.3239	1	34788	34788		0.79363	0	1	1371000			39426	431	19375	19458	45761	45761					-0.0855551392775169
VPGGQGKG	8	Unmodified	_VPGGQGKG_					0	0	0		nc|ENSG00000172819|P13631-3|RARG;nc|ENSG00000172819|P13631-4|RARG;nc|ENSG00000172819|P13631-2|RARG;ENSG00000172819|ENST00000425354|RARG	nc|ENSG00000172819|P13631-3|RARG	nc|ENSG00000172819|P13631-3|RARG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.1950256228447	2	350.192845	698.371138	-0.84938	-0.00029745	4.4836	0.0015701	3.6342	0.0012727	350.1946962572915	16.964	0.16821	17.862	17.708	17.876	0.89794					8	5	2	0	0	0	0.89008	1	7059	7059		2.5775	0	1	462080			39427	4254	19376	19459	45762	45762					0.009887154576290413
VPGGQGKG	8	Unmodified	_VPGGQGKG_					0	0	0		nc|ENSG00000172819|P13631-3|RARG;nc|ENSG00000172819|P13631-4|RARG;nc|ENSG00000172819|P13631-2|RARG;ENSG00000172819|ENST00000425354|RARG	nc|ENSG00000172819|P13631-3|RARG	nc|ENSG00000172819|P13631-3|RARG	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	350.192845	698.371138	-0.16456	-5.7628E-05	3.9377	0.001379	3.7731	0.0013213	350.1943379065256	16.736	0.17144	18.039	17.909	18.08	1.3023	0.088437	-0.0001603	NaN	2.5775	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	218460			39428	4254	19376	19459							0.009887154576290413
VPGPGLRL	8	Unmodified	_VPGPGLRL_					0	0	0		ENST00000373456.11_1_1:33415327-33429675:-|nuORF	ENST00000373456.11_1_1:33415327-33429675:-|nuORF	ENST00000373456.11_1_1:33415327-33429675:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	808.5055419802666	1	808.503949	807.496673	2.9218	0.0023623	-0.81958	-0.00066263	2.1023	0.0016997	808.5034365003531	106.61	0.12926	106.77	106.69	106.82	0.16174					12	6	2	0	0	0	0.89176	1	45635	45635		0.79363	0	1	14612000			39429	6161	19377	19460	45763	45763					0.08522427313835124
VPGRIKKP	8	Unmodified	_VPGRIKKP_					0	0	0		ENST00000251809.4_1_8:101252790-101252838:+|nuORF	ENST00000251809.4_1_8:101252790-101252838:+|nuORF	ENST00000251809.4_1_8:101252790-101252838:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	894.7124511599541	1	894.588348	893.581071	3.1095	0.0027817	-3.1636	-0.0028301	-0.054061	-4.8363E-05	894.5837757745055	95.285	0.12627	95.687	95.641	95.768	0.40208					6	4	2	0	0	0	2.3239	1	40074	40074		0.79363	0	1	4110600			39430	5583	19378	19461	45764	45764					0.13002378130590841
VPGRVALV	8	Unmodified	_VPGRVALV_					0	0	0			REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	810.5217773318291	1	810.519599	809.512323	1.2673	0.0010272	-0.10561	-8.5603E-05	1.1617	0.00094159	810.5196629642937	107.78	0.4239	107.78	107.55	107.97	0					53	22	3	0	0	0	0.89176	1	46181	46181		0.79363	0	1	63284000	+		39431	14178	19379	19462	45765	45765					0.09994713830883484
VPGRVALV	8	Unmodified	_VPGRVALV_					0	0	0			REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	810.519599	809.512323	2.7759	0.0022499	0.20556	0.00016661	2.9815	0.0024165	810.519832310998	107.71	0.18315	107.87	107.79	107.97	0.15781	0.034394	0.000761	NaN	0.79363	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27990000	+		39432	14178	19379	19462							0.09994713830883484
VPGRVALV	8	Unmodified	_VPGRVALV_					0	0	0			REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	REV__Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|176|2|anti-sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	810.519599	809.512323	2.9271	0.0023725	-0.82675	-0.0006701	2.1003	0.0017024	810.519638370289	107.71	0.18461	107.87	107.75	107.94	0.15795	0.034453	-7.5707E-05	NaN	0.79363	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23677000	+		39433	14178	19379	19462							0.09994713830883484
VPGVLVRLRL	10	Unmodified	_VPGVLVRLRL_					0	0	0			REV__ENST00000532817.5_3_19:55677701-55678007:-|nuORF	REV__ENST00000532817.5_3_19:55677701-55678007:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.3806640505791	2	561.3795	1120.74445	3.2319	0.0018143	-3.1006	-0.0017406	0.13127	7.369E-05	561.3777612370085	107.51	0.21117	107.67	107.54	107.75	0.15795					39	10	5	0	0	0	0.89803	2	46163	46163;46226		0.45834	0	1	1337400000	+		39434	13724	19380	19463	45766;45767	45766					0.1889055618164548
VPHCGPKS	8	Unmodified	_VPHCGPKS_					0	0	0		ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	824.4107543826103	1	824.408334	823.401058	1.2472	0.0010282	0.26702	0.00022014	1.5142	0.0012483	824.4094183166413	104.89	0.07515	104.89	104.85	104.92	0					8	3	3	0	0	0	0.89176	1	44400	44400		0.79363	0	1	21517000			39435	7316	19381	19464	45768	45768					-0.017706688686985217
VPHCGPKS	8	Unmodified	_VPHCGPKS_					0	0	0		ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	824.408334	823.401058	2.7691	0.0022829	-0.18936	-0.00015611	2.5797	0.0021268	824.4084070707489	104.84	0.094048	104.9	104.85	104.95	0.056801	-0.027266	0.0011191	NaN	0.79363	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23534000			39436	7316	19381	19464							-0.017706688686985217
VPHCGPKS	8	Unmodified	_VPHCGPKS_					0	0	0		ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	ENST00000558771.1_1_15:99827465-99874290:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	824.408334	823.401058	2.8413	0.0023424	-2.1959	-0.0018103	0.64533	0.00053202	824.4073601576168	104.82	0.09201	104.98	104.91	105.01	0.15859	0.049767	-0.00053511	NaN	0.79363	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31853000			39437	7316	19381	19464							-0.017706688686985217
VPHGYEIEF	9	Unmodified	_VPHGYEIEF_					0	0	0		nc|ENSG00000087085|P22303-3|ACHE;ENSG00000087085|ENST00000241069|ACHE;nc|ENSG00000087085|P22303-4|ACHE;nc|ENSG00000087085|P22303-2|ACHE	nc|ENSG00000087085|P22303-3|ACHE	nc|ENSG00000087085|P22303-3|ACHE	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7614013552666	2	545.763832	1089.51311	2.1877	0.001194	-2.6386	-0.0014401	-0.45094	-0.00024611	545.7627492474389	43.893	0.19222	45.837	45.701	45.893	1.9438					10	5	2	0	0	0	0.11478	1	18413	18413		44.407	23.953	1	1065500			39438	1081	19382	19465	45769	45769					-0.02806536310708907
VPHIPLVIL	9	Unmodified	_VPHIPLVIL_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|61|2|sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|61|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	334.2232849001884	3	334.223306	999.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.81	1	101.81	101.31	102.31	0								0	0	0	0.42693	1	42636	42636		0.26902	0	1		+		39439	14201	19383	19466	45770	45770					0.1482498862170587
VPHIPLVIL	9	Unmodified	_VPHIPLVIL_					0	0	0			REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|61|2|sense	REV__HERVH-int_dup552|chr2:41378264-41384502:+|1.1913076545840813|0.0121216847932543|6.62|418.0|61|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.2244140505791	3	334.223306	999.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.7	1	101.87	101.37	102.37	0.17032								0	0	0	0.42693	1	42791	42791		0.26902	0	1		+		39440	14201	19383	19466	45771	45771					0.1482498862170587
VPHQPQTDYAL	11	Unmodified	_VPHQPQTDYAL_					0	0	0		nc|ENSG00000135903|P23760|PAX3;nc|ENSG00000135903|P23760-6|PAX3;ENSG00000135903|ENST00000392070|PAX3;nc|ENSG00000135903|P23760-8|PAX3	nc|ENSG00000135903|P23760|PAX3	nc|ENSG00000135903|P23760|PAX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	422.8899719119072	3	423.547177	1267.6197	2.3736	0.0010053	-2.0724	-0.00087775	0.3012	0.00012757	423.5463870992546	45.149	0.3237	46.514	46.369	46.692	1.3653					12	9	2	0	0	0	0.14606	1	18919	18919		7.9454	3.4165	1	1732700			39441	2690	19384	19467	45772	45772					-0.003404058161777357
VPHSYGVNLVL	11	Unmodified	_VPHSYGVNLVL_					0	0	0			REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3356201052666	2	599.334956	1196.65536	2.2072	0.0013228	0.93233	0.00055878	3.1395	0.0018816	599.3357005824246	76.119	0.3351	76.441	76.176	76.511	0.32163					17	10	2	0	0	0	0.96769	1	31805	31805		5.7319	2.1354	1	857040	+		39442	14782	19385	19468	45773	45773					0.06489676431465341
VPHSYGVNLVL	11	Unmodified	_VPHSYGVNLVL_					0	0	0			REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	599.334956	1196.65536	2.1751	0.0013036	3.3361	0.0019995	5.5112	0.0033031	599.3365640921799	76.545	0.18854	76.545	76.435	76.623	0	0.051957	0.0015055	NaN	5.7319	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	435000	+		39443	14782	19385	19468							0.06489676431465341
VPHSYGVNLVL	11	Unmodified	_VPHSYGVNLVL_					0	0	0			REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	REV__tr|A0A553SH93|A0A553SH93_NIACILargeribosomalsubunitproteinuL6OS=NialliacirculansOX=1397GN=rplFPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	599.334956	1196.65536	2.2072	0.0013228	0.93233	0.00055878	3.1395	0.0018816	599.3357005824246	76.119	0.3351	76.441	76.176	76.511	0.32163	-0.051957	-0.0013759	NaN	5.7319	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	857040	+		39444	14782	19385	19468							0.06489676431465341
VPHVAEAESI	10	Unmodified	_VPHVAEAESI_					0	0	0			REV__nc|ENSG00000103150|O95822-2|MLYCD	REV__nc|ENSG00000103150|O95822-2|MLYCD	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	525.7663452029228	2	526.274564	1050.53457	0.84372	0.00044403	0.93208	0.00049053	1.7758	0.00093456	526.2742519083278	53.341	0.28796	54.742	54.506	54.794	1.4005					16	11	2	0	0	0	0.11298	1	22292	22292		37.974	7.3375	1	4483900	+		39445	9095	19386	19469	45774	45774					0.011328487179980584
VPIDITVKL	9	Unmodified	_VPIDITVKL_					0	0	0		nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000119041|ENST00000263956|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.3185302615166	2	499.318243	996.621933	2.0156	0.0010064	-0.31981	-0.00015969	1.6957	0.00084672	499.3177414670854	58.981	0.45161	60.401	60.166	60.617	1.4196					31	14	3	0	0	0	0.02878	2	24740	24691;24740		89.401	30.093	1	5023900			39446	2058	19387	19470	45775;45776	45776					0.12348674659574499
VPIDITVKL	9	Unmodified	_VPIDITVKL_					0	0	0		nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3;ENSG00000119041|ENST00000263956|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	nc|ENSG00000119041|Q9Y5Q9-2|GTF3C3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3176757693291	2	499.318243	996.621933	1.5067	0.00075235	-0.28877	-0.00014419	1.218	0.00060816	499.31795941158606	58.497	0.38995	60.466	60.214	60.604	1.969					24	12	2	0	0	0	0.02878	2	24535	24485;24535		89.401	31.679	1	3017400			39447	2058	19387	19470	45777;45778	45778					0.12348674659574499
VPIELFRPL	9	Unmodified	_VPIELFRPL_					0	0	0		ENST00000482361.1_1_6:41877193-41888846:-|nuORF	ENST00000482361.1_1_6:41877193-41888846:-|nuORF	ENST00000482361.1_1_6:41877193-41888846:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3320800662041	2	542.331685	1082.64882	1.8028	0.00097771	-0.60863	-0.00033008	1.1942	0.00064764	542.3309034390325	67.064	0.36775	68.453	68.246	68.614	1.3888					19	11	2	0	0	0	0.057024	1	28115	28115		65.235	29.191	1	1797800			39448	6834	19388	19471	45779	45779					0.11079783270747612
VPIELFRPL	9	Unmodified	_VPIELFRPL_					0	0	0		ENST00000482361.1_1_6:41877193-41888846:-|nuORF	ENST00000482361.1_1_6:41877193-41888846:-|nuORF	ENST00000482361.1_1_6:41877193-41888846:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3326904177666	2	542.331685	1082.64882	1.5888	0.00086165	0.13089	7.0984E-05	1.7197	0.00093263	542.3316080972866	66.53	0.37468	68.419	68.182	68.557	1.8889					18	11	2	0	0	0	0.070055	1	27917	27917		60.074	27.768	1	1172900			39449	6834	19388	19471	45780	45780					0.11079783270747612
VPIIFADEL	9	Unmodified	_VPIIFADEL_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.7878600955009	2	508.786776	1015.559	3.0177	0.0015354	1.3806	0.00070243	4.3983	0.0022378	508.7866556606992	79.999	0.30808	81.25	81.109	81.417	1.2512					18	9	3	0	0	0	0.18999	1	33564	33564		34.187	7.8461	1	1907800			39450	4279	19389	19472	45781	45781					0.05184108871515036
VPIIFADEL	9	Unmodified	_VPIIFADEL_					0	0	0		ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	ENSG00000173402|ENST00000308775|DAG1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	508.786776	1015.559	1.8008	0.00091624	0.60361	0.00030711	2.4044	0.0012234	508.7867373928301	79.528	0.33761	81.245	81.046	81.383	1.7167	-0.0026677	-0.00038235	NaN	34.187	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1056600			39451	4279	19389	19472							0.05184108871515036
VPIIRDLDP	9	Unmodified	_VPIIRDLDP_					0	0	0			REV__LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	REV__LIG1|p.T614Ifs*112|1|0.04|ENSG00000105486|chr19:48128003-48128004|-/GGAGGCGGAGGTTGCAGTGAGCTGAGATC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.3542358279228	2	519.303124	1036.5917	3.4393	0.001786	-0.88462	-0.00045938	2.5547	0.0013267	519.3027534667699	74.527	0.4206	75.845	75.681	76.101	1.318					41	13	4	0	0	0	0.116	1	31213	31213		9.3474	0.75416	1	28846000	+		39452	9177	19390	19473	45782	45782					0.07486315994378856
VPIKRKLKP	9	Unmodified	_VPIKRKLKP_					0	0	0			REV__nc|ENSG00000122735|Q9UI46-2|DNAI1	REV__nc|ENSG00000122735|Q9UI46-2|DNAI1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	1079.249560534954	1	1078.74591	1077.73863	1.2834	0.0013845	-3.2724	-0.0035301	-1.989	-0.0021456	1079.7446146694608	38.176	0.25201	39.996	39.91	40.162	1.8202					9	7	2	0	0	0	0.11946	1	16010	16010		0.6015	0	1	1243600	+		39453	14421	19391	19474	45783	45783					0.20287457669974174
VPILLLPLPI	10	Unmodified	_VPILLLPLPI_					0	0	0		SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant;ENSG00000007216|ENST00000314669|SLC13A2;nc|ENSG00000007216|Q13183-3|SLC13A2	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2544433474541	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.43	1	101.43	100.93	101.93	0								0	0	0	0.66254	1	42474	42474		0.15932	0	1				39454	519	19392	19475	45784	45784					0.20175288004134018
VPILLLPLPI	10	Unmodified	_VPILLLPLPI_					0	0	0		SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant;ENSG00000007216|ENST00000314669|SLC13A2;nc|ENSG00000007216|Q13183-3|SLC13A2	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2561828494072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.04	1	100.11	99.613	100.61	0.072716								0	0	0	0.66254	1	41887	41887		0.15932	0	1				39455	519	19392	19475	45785	45785					0.20175288004134018
VPILLLPLPI	10	Unmodified	_VPILLLPLPI_					0	0	0		SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant;ENSG00000007216|ENST00000314669|SLC13A2;nc|ENSG00000007216|Q13183-3|SLC13A2	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	SLC13A2|p.E365Gfs*72|1|0.18|ENSG00000007216|chr17:28493778-28493779|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	363.2542907595634	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.38	1	101.44	100.94	101.94	0.067009								0	0	0	0.66254	1	42445	42445		0.15932	0	1				39456	519	19392	19475	45786	45786					0.20175288004134018
VPILVQPPCL	10	Unmodified	_VPILVQPPCL_					0	0	0			REV__ENST00000478641.5_1_1:1249679-1249832:-|nuORF	REV__ENST00000478641.5_1_1:1249679-1249832:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8203002810478	2	539.820095	1077.62564	3.3542	0.0018107	-1.1601	-0.00062626	2.1941	0.0011844	539.819573215168	94.198	0.56946	95.386	95.174	95.743	1.1887					41	17	3	0	0	0	0.79742	1	39584	39584		12.532	3.1841	1	2737300	+		39457	13329	19393	19476	45787	45787					0.08993021161768411
VPINHHSTFCL	11	Unmodified	_VPINHHSTFCL_					0	0	0		L1MB3_dup16926|chr22:15811040-15811839:+|1.0764931184738016|0.3095763404933719|1.8|423.0|53|3|anti-sense	L1MB3_dup16926|chr22:15811040-15811839:+|1.0764931184738016|0.3095763404933719|1.8|423.0|53|3|anti-sense	L1MB3_dup16926|chr22:15811040-15811839:+|1.0764931184738016|0.3095763404933719|1.8|423.0|53|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.2168456912041	3	423.213252	1266.61793	2.052	0.00086845	2.4296	0.0010282	4.4816	0.0018967	423.215572879635	44.636	0.38527	46.595	46.382	46.767	1.9596					32	11	4	0	0	0	0.95983	1	18672	18672		2.8433	0	1	3218000			39458	7704	19394	19477	45788	45788					-0.0047173810580716236
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2517883181572	2	422.25036	842.486168	3.0953	0.001307	0.00081781	3.4532E-07	3.0961	0.0013073	422.2502888042906	107.66	0.18053	107.82	107.72	107.9	0.15781					24	9	3	0	0	0	0.89008	1	46357	46357		2.5775	1.7838	1	183070000	+		39459	9555	19395	19478	45789	45789					0.05862399868760804
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2494994997978	2	422.25036	842.486168	3.2382	0.0013673	-2.7904	-0.0011782	0.44786	0.00018911	422.24924937253485	107.64	0.16417	107.8	107.7	107.86	0.15795					18	8	3	0	0	0	0.89008	1	46293	46293		2.5775	1.7838	1	129570000	+		39460	9555	19395	19478	45790	45790					0.05862399868760804
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	422.25036	842.486168	0.32544	0.00013742	1.7878	0.0007549	2.1132	0.00089232	422.2513364549959	107.69	0.14711	107.69	107.62	107.77	0	-0.070551	0.0018824	NaN	2.5775	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20747000	+		39461	9555	19395	19478							0.05862399868760804
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	422.25036	842.486168	3.0428	0.0012848	-0.9855	-0.00041613	2.0573	0.00086869	422.2495343492067	107.7	0.14606	107.75	107.66	107.8	0.052452	-0.01585	-0.00045964	NaN	2.5775	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12372000	+		39462	9555	19395	19478							0.05862399868760804
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	422.25036	842.486168	3.0953	0.001307	0.00081781	3.4532E-07	3.0961	0.0013073	422.2502888042906	107.66	0.18053	107.82	107.72	107.9	0.15781	0.051945	0.0003733	NaN	2.5775	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	183070000	+		39463	9555	19395	19478							0.05862399868760804
VPIQKAST	8	Unmodified	_VPIQKAST_					0	0	0			REV__ENSG00000119737|ENST00000394705|GPR75	REV__ENSG00000119737|ENST00000394705|GPR75	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	422.25036	842.486168	3.2382	0.0013673	-2.7904	-0.0011782	0.44786	0.00018911	422.24924937253485	107.64	0.16417	107.8	107.7	107.86	0.15795	0.034456	-0.0019839	NaN	2.5775	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	129570000	+		39464	9555	19395	19478							0.05862399868760804
VPITLLLAVI	10	Unmodified	_VPITLLLAVI_					0	0	0		tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2437316775322	3	351.242366	1050.70527	0.085562	3.0053E-05	2.1527	0.00075613	2.2383	0.00078618	351.2432691140426	17.318	1.491	17.469	17.151	18.642	0.15093					166	53	6	0	0	0	0.89803	2	7221	7221;7309		0.69767	0	1	243130000			39465	16372	19396	19479	45791;45792	45791					0.18194411107424457
VPITLLLAVI	10	Unmodified	_VPITLLLAVI_					0	0	0		tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2428771853447	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	2	7763	7763;7851		0.69767	0	1	143590000			39466	16372	19396	19479	45793;45794	45793					0.18194411107424457
VPITLLLAVI	10	Unmodified	_VPITLLLAVI_					0	0	0		tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	tr|A0A553SMA7|A0A553SMA7_NIACIPTSgalactitoltransportersubunitIICOS=NialliacirculansOX=1397GN=CEQ21_22100PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3619262576103	2	526.359911	1050.70527	0.40819	0.00021486	2.7741	0.0014602	3.1822	0.001675	526.361331174261	18.028	0.46588	19.476	19.292	19.758	1.448					36	15	3	0	0	0	0.89803	1	7598	7598		0.40072	0	1	11213000			39467	16372	19396	19479	45795	45795					0.18194411107424457
VPIVPLLSI	9	Unmodified	_VPIVPLLSI_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	476.1995727419853	2	475.817879	949.621205	1.6871	0.00080276	0.73482	0.00034964	2.4219	0.0011524	475.8174657600539	103.33	0.3103	103.33	103.1	103.41	0					16	12	2	0	0	0	0.11948	1	43243	43243		0	0	1	2982400	+		39468	9412	19397	19480	45796	45796					0.1443788001053008
VPIVPLLSI	9	Unmodified	_VPIVPLLSI_					0	0	0			REV__ENSG00000114650|ENST00000265565|SCAP	REV__ENSG00000114650|ENST00000265565|SCAP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	475.817879	949.621205	3.2827	0.0015619	-2.8195	-0.0013416	0.46312	0.00022036	475.8157933207987	103.29	0.14008	103.45	103.35	103.49	0.16446	0.045188	-0.001782	NaN	0	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	694380	+		39469	9412	19397	19480							0.1443788001053008
VPIVPPKRQ	9	Unmodified	_VPIVPPKRQ_					0	0	0			REV__nc|ENSG00000134744|Q5TAX3|TUT4	REV__nc|ENSG00000134744|Q5TAX3|TUT4	MSMS	GG20161007_CRH_Patient100_W632_02	4	345.2234985232353	3	345.222076	1032.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.317	1	53.292	52.792	53.792	1.9753								0	0	0	0.42693	1	21506	21506		1.0715	0.67075	1		+		39470	9915	19398	19481	45797	45797					0.129383188478414
VPKAGGLN	8	Unmodified	_VPKAGGLN_					0	0	0			REV__tr|A0A553SF67|A0A553SF67_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_08365PE=4SV=1	REV__tr|A0A553SF67|A0A553SF67_NIACIPTSsugartransporterOS=NialliacirculansOX=1397GN=CEQ21_08365PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	755.4418212771416	1	755.441015	754.433738	2.7369	0.0020675	-1.1411	-0.00086204	1.5958	0.0012055	755.4399042679063	107.73	0.18592	107.89	107.79	107.98	0.15795					23	9	3	0	0	0	0.89178	1	46344	46344		0.69038	0	1	255590000	+		39471	14691	19399	19482	45798	45798					0.04669861525792385
VPKIFTRILRS	11	Unmodified	_VPKIFTRILRS_					0	0	0		ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.9506713747978	3	443.950357	1328.82924	4.244	0.0018841	-0.58067	-0.00025779	3.6633	0.0016263	443.94984383931865	95.431	0.36407	95.852	95.675	96.039	0.42119					33	13	3	0	0	0	1.0156	3	40136	40136;40184;40222		2.8433	1.5136	1	4366800			39472	837	19400	19483	45799;45800;45801	45799					0.17797881927594972
VPKIFTRILRS	11	Unmodified	_VPKIFTRILRS_					0	0	0		ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	ENSG00000068878|ENST00000404125|PSME4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	443.9505798220634	3	443.950357	1328.82924	3.3922	0.001506	-2.0907	-0.00092816	1.3015	0.00057782	443.9493659122019	95.15	0.39565	95.552	95.314	95.709	0.40208					51	16	4	0	0	0	1.0156	1	40013	40013		2.8433	1.5136	1	6590500			39473	837	19400	19483	45802	45802					0.17797881927594972
VPKKIVVE	8	Unmodified	_VPKKIVVE_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant;TTN|p.E11597Rfs*5|1|0.5|ENSG00000155657|chr2:178651954-178651954|A/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3037902712822	2	456.299853	910.585153	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.18	1	108.34	107.84	108.84	0.15781								0	0	0	1.0178	1	46708	46708		0.69038	0	1				39474	3425;7900	19401	19484	45803	45803					0.1262842283366581
VPKMVFLI	8	Unmodified	_VPKMVFLI_					0	0	0		sp|P16750|GO_HCMVAGlycoproteinOOS=Humancytomegalovirus(strainAD169)OX=10360GN=GOPE=1SV=1	sp|P16750|GO_HCMVAGlycoproteinOOS=Humancytomegalovirus(strainAD169)OX=10360GN=GOPE=1SV=1	sp|P16750|GO_HCMVAGlycoproteinOOS=Humancytomegalovirus(strainAD169)OX=10360GN=GOPE=1SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	473.2000915408134	2	473.793349	945.572146	2.1922	0.0010387	0.010016	4.7456E-06	2.2022	0.0010434	473.7931534191762	70.786	0.88837	71.11	70.831	71.72	0.32359					46	27	3	0	0	0	2.3239	1	29746	29746		0	0	1	1478000			39475	15993	19402	19485	45804	45804					0.09718268449933021
VPKPGKGA	8	Unmodified	_VPKPGKGA_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2336303591728	2	377.234513	752.454474	-0.19729	-7.4426E-05	-1.5409	-0.00058129	-1.7382	-0.00065571	377.2339489445352	58.809	0.44743	58.809	58.526	58.974	0					22	13	2	0	0	0	0.89176	1	24476	24476		0.79363	0	1	3950500			39476	1605	19403	19486	45805	45805					0.06834451905467631
VPKRVAGV	8	Unmodified	_VPKRVAGV_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2691833376884	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2386	1	2.8728	2.3728	3.3728	0.63417								0	0	0	1.0178	1	920	920		0.79363	0	1		+		39477	9026	19404	19487	45806	45806					0.1039411620519104
VPKRYFSH	8	Unmodified	_VPKRYFSH_					0	0	0		SRD5A3|p.R113Gfs*21|1|0.15|ENSG00000128039|chr4:55359458-55359459|-/TGGGG|frameshift_variant;ENSG00000128039|ENST00000264228|SRD5A3	SRD5A3|p.R113Gfs*21|1|0.15|ENSG00000128039|chr4:55359458-55359459|-/TGGGG|frameshift_variant	SRD5A3|p.R113Gfs*21|1|0.15|ENSG00000128039|chr4:55359458-55359459|-/TGGGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	345.1905700564384	3	345.190776	1032.5505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.974	1	82.254	81.754	82.754	0.2802								0	0	0	1.0178	1	34276	34276		1.6526	0.17072	1				39478	2355	19405	19488	45807	45807					0.03552599745557927
VPKTERKKRR	10	Unmodified	_VPKTERKKRR_					0	0	0		MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant;MYO9A|p.E2496Tfs*17|1|0.24|ENSG00000066933|chr15:71826742-71826743|-/ACCCACCTTTGGGAAGGGAAAAGAGGGTG|frameshift_variant;nc|ENSG00000066933|B2RTY4-2|MYO9A;ENSG00000066933|ENST00000356056|MYO9A;nc|ENSG00000066933|B2RTY4-4|MYO9A;nc|ENSG00000066933|B2RTY4-5|MYO9A	MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant	MYO9A|p.E2496Lfs*8|1|0.27|ENSG00000066933|chr15:71826741-71826742|-/AA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2768737673759	3	433.277355	1296.81024	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.253	1	86.849	86.349	87.349	1.5962								0	0	0	0.66237	1	35806	35806		0.15932	0.01943	1				39479	814	19406	19489	45808	45808					0.17370345356539474
VPKVETNVV	9	Unmodified	_VPKVETNVV_					0	0	0			REV__ENSG00000146038|ENST00000378454|DCDC2	REV__ENSG00000146038|ENST00000378454|DCDC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7914001345634	2	492.78985	983.565146	1.6985	0.00083701	0.54557	0.00026885	2.2441	0.0011059	492.78998130624916	54.632	0.3174	56.037	55.835	56.152	1.4048					13	9	2	0	0	0	0.64949	1	22836	22836		9.3474	1.4373	1	1789300	+		39480	10292	19407	19490	45809	45809					0.07270627103059724
VPKVETNVV	9	Unmodified	_VPKVETNVV_					0	0	0			REV__ENSG00000146038|ENST00000378454|DCDC2	REV__ENSG00000146038|ENST00000378454|DCDC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7910339236259	2	492.78985	983.565146	1.8866	0.00092969	0.36802	0.00018136	2.2546	0.001111	492.7899129113116	54.126	0.61781	56.094	55.877	56.495	1.9684					25	19	3	0	0	0	0.64949	1	22688	22688		9.3474	0.75416	1	1702500	+		39481	10292	19407	19490	45810	45810					0.07270627103059724
VPLAAPIKV	9	Unmodified	_VPLAAPIKV_					0	0	0			REV__nc|ENSG00000145715|P20936-3|RASA1	REV__nc|ENSG00000145715|P20936-3|RASA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	454.3029968142509	2	454.302396	906.590239	2.0611	0.00093638	0.42958	0.00019516	2.4907	0.0011315	454.30269813472887	45.818	0.31128	47.193	47.023	47.334	1.3751					25	9	3	0	0	0	0.28226	1	19170	19170		26.341	4.5946	1	3394900	+		39482	10282	19408	19491	45811	45811					0.13320726696281326
VPLDYGKK	8	Unmodified	_VPLDYGKK_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MSMS	GG20161007_CRH_Patient100_W632_01	3	460.2690002322197	2	460.26601	918.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.16	1	105.32	104.82	105.82	0.15859								0	0	0	1.0178	1	44724	44724		2.5775	0	1		+		39483	11375	19409	19492	45812	45812					0.054949729028635375
VPLFKHPF	8	Unmodified	_VPLFKHPF_					0	0	0			REV__ENST00000477828.6_1_1:52522012-52526140:+|nuORF	REV__ENST00000477828.6_1_1:52522012-52526140:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	328.1612121462822	3	328.860367	983.559273	-2.639	-0.00086786	1.1014	0.00036222	-1.5375	-0.00050563	328.8608212303575	25.028	0.39823	25.028	24.888	25.287	0					16	12	2	0	0	0	2.3239	1	10448	10448		0	0	1	287390	+		39484	13322	19410	19493	45813	45813					0.06683573382031227
VPLFPILL	8	Unmodified	_VPLFPILL_					0	0	0			REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|356|2|anti-sense	REV__L1PA3_dup2320|chr3:189017230-189025537:-|1.0543404175743978|0.1456232774921604|2.86|424.0|356|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5368224978447	3	304.537002	910.589176	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.667	1	24.667	24.167	25.167	0								0	0	0	1.0178	1	10290	10290		0.45834	0	1		+		39485	8317	19411	19494	45814	45814					0.13030512327384258
VPLGGPVL	8	Unmodified	_VPLGGPVL_					0	0	0		ENSG00000057935|ENST00000405094|MTA3;nc|ENSG00000057935|Q9BTC8-2|MTA3;ENST00000490611.1_1_2:42886927-42909744:+|nuORF	ENSG00000057935|ENST00000405094|MTA3	ENSG00000057935|ENST00000405094|MTA3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	376.5393859744072	2	376.239264	750.463976	1.5013	0.00056485	-2.0387	-0.00076703	-0.53737	-0.00020218	376.2380507201136	45.246	0.25948	46.612	46.433	46.692	1.3653					11	7	2	0	0	0	2.3239	1	18889	18889		0.79363	0	1	830390			39486	731	19412	19495	45815	45815					0.0787622019098535
VPLITILV	8	Unmodified	_VPLITILV_					0	0	0		tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	867.5942870974541	1	867.591367	866.584091	3.0351	0.0026332	1.3457	0.0011676	4.3808	0.0038008	867.59206026589	106.08	0.10532	106.24	106.18	106.28	0.15781					13	5	3	0	0	0	0.89198	1	45332	45332		0	0	1	143370000			39487	16896	19413	19496	45816	45816					0.14546208464764732
VPLITILV	8	Unmodified	_VPLITILV_					0	0	0		tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	tr|A0A7D6VT24|A0A7D6VT24_9CLOTPTSglucosetransportersubunitIIAOS=ClostridiumintestinaleOX=36845GN=HZF06_15205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	867.5939819216728	1	867.591367	866.584091	3.1292	0.0027148	0.82098	0.00071227	3.9502	0.0034271	867.5916560460017	106.05	0.088486	106.21	106.15	106.24	0.16174					11	4	3	0	0	0	0.89198	1	45245	45245		0	0	1	102220000			39488	16896	19413	19496	45817	45817					0.14546208464764732
VPLKKAKE	8	Unmodified	_VPLKKAKE_					0	0	0		ENSG00000091986|ENST00000206423|CCDC80;nc|ENSG00000091986|Q76M96-2|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	ENSG00000091986|ENST00000206423|CCDC80	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	912.5893432497978	1	912.587679	911.580402	3.127	0.0028537	-0.12708	-0.00011597	2.9999	0.0027377	912.5873771144672	109.18	0.29121	109.33	109.2	109.49	0.1548					41	13	4	0	0	0	0.89185	1	47256	47256		0	0	1	201890000			39489	1156	19414	19497	45818	45818					0.12107538690884212
VPLLKPLWL	9	Unmodified	_VPLLKPLWL_					0	0	0			REV__ENST00000341084.6_1_8:101270923-101271007:-|nuORF	REV__ENST00000341084.6_1_8:101270923-101271007:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2415038943291	3	360.238956	1077.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.177	1	96.177	95.677	96.677	0								0	0	0	0.42693	1	40209	40209		0.26902	0	1		+		39490	12494	19415	19498	45819	45819					0.15929848172845595
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5366088747978	3	304.538125	910.592547	-3.4043	-0.0010367	-1.4132	-0.00043038	-4.8175	-0.0014671	304.5376447835041	15.107	0.77803	15.107	14.596	15.374	0					42	24	4	0	0	0	0.89198	1	6264	6264		0	0	1	3637600			39491	3629	19416	19499	45820	45820					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5366088747978	3	304.538125	910.592547	-3.1658	-0.00096411	-1.6359	-0.00049819	-4.8017	-0.0014623	304.5375881297061	20.315	1.4277	20.315	20.011	21.439	0					94	45	4	0	0	0	0.89198	4	8393	8393;8445;8498;8575		0	0	1	5016000			39492	3629	19416	19499	45821;45822;45823;45824	45821					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5366088747978	3	304.538125	910.592547	-2.8628	-0.00087184	-0.97847	-0.00029798	-3.8413	-0.0011698	304.5379790137935	27.395	1.2971	27.395	26.325	27.622	0					81	42	2	0	0	0	0.89198	1	11433	11433		0	0	1	5505000			39493	3629	19416	19499	45825	45825					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5363952517509	3	304.538125	910.592547	-2.6511	-0.00080736	-0.63725	-0.00019407	-3.2883	-0.0010014	304.53800454125223	31.932	1.0633	31.932	31.41	32.473	0					55	33	2	0	0	0	0.89198	2	13423	13423;13501		0	0	1	2974200			39494	3629	19416	19499	45826;45827	45826					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5366699099541	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.911	1	22.911	22.411	23.411	0								0	0	0	1.0178	1	9544	9544		0	0	1				39495	3629	19416	19499	45828	45828					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5367004275322	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.016	1	23.016	22.516	23.516	0								0	0	0	1.0178	1	9591	9591		0	0	1				39496	3629	19416	19499	45829	45829					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5367614626884	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.786	1	24.786	24.286	25.286	0								0	0	0	1.0178	1	10340	10340		0	0	1				39497	3629	19416	19499	45830	45830					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5367919802666	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.916	1	24.916	24.416	25.416	0								0	0	0	1.0178	1	10395	10395		0	0	1				39498	3629	19416	19499	45831	45831					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5370056033134	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.451	1	29.451	28.951	29.951	0								0	0	0	1.0178	1	12330	12330		0	0	1				39499	3629	19416	19499	45832	45832					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	305.1393920779228	3	304.538125	910.592547	-2.6156	-0.00079655	-1.0148	-0.00030905	-3.6304	-0.0011056	304.53783761375325	32.87	0.79137	32.87	32.473	33.265	0					60	26	3	0	0	0	2.3239	1	13928	13928		0	0	1	1659600			39500	3629	19416	19499	45833	45833					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2490722537041	3	304.538125	910.592547	0.94283	0.00028713	-0.69082	-0.00021038	0.25201	7.6747E-05	304.5381397859087	39.444	0.28277	39.757	39.609	39.892	0.31263					15	8	2	0	0	0	2.3239	1	16605	16605		0	0	1	294860			39501	3629	19416	19499	45834	45834					0.1336743910972018
VPLLLMIL	8	Unmodified	_VPLLLMIL_					0	0	0		nc|ENSG00000162600|Q96E52-2|OMA1;ENSG00000162600|ENST00000371226|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	nc|ENSG00000162600|Q96E52-2|OMA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5371887087822	3	304.538125	910.592547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.956	1	29.731	29.231	30.231	1.7754								0	0	0	1.0178	1	11701	11701		0	0	1				39502	3629	19416	19499	45835	45835					0.1336743910972018
VPLLLPPALA	10	Unmodified	_VPLLLPPALA_					0	0	0		ENSG00000165879|ENST00000371021|FRAT1	ENSG00000165879|ENST00000371021|FRAT1	ENSG00000165879|ENST00000371021|FRAT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	335.2245056033134	3	335.223194	1002.64775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.38	1	111.38	110.88	111.88	0								0	0	0	0.66264	1	48174	48174		0	0	1				39503	3865	19417	19500	45836	45836					0.14653568901826475
VPLLLRLR	8	Unmodified	_VPLLLRLR_					0	0	0			REV__nc|ENSG00000142185|O94759-2|TRPM2	REV__nc|ENSG00000142185|O94759-2|TRPM2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	490.1718322634697	2	490.342387	978.67022	3.4509	0.0016921	-3.5852	-0.001758	-0.13427	-6.5838E-05	490.34025311897915	104.5	0.4427	104.55	104.37	104.82	0.056808					46	23	3	0	0	0	2.3239	1	44091	44091		0	0	1	12013000	+		39504	10171	19418	19501	45837	45837					0.18003213090116787
VPLLSAFV	8	Unmodified	_VPLLSAFV_					0	0	0		ENST00000360089.8_1_1:158065157-158065664:+|nuORF	ENST00000360089.8_1_1:158065157-158065664:+|nuORF	ENST00000360089.8_1_1:158065157-158065664:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.2620727419853	2	423.260197	844.50584	3.2684	0.0013834	-0.21625	-9.1531E-05	3.0522	0.0012919	423.2603231858837	91.933	0.35181	93.26	93.021	93.373	1.3269					16	10	2	0	0	0	0.89008	1	38720	38720		2.5775	0	1	733130			39505	6024	19419	19502	45838	45838					0.07736775879516244
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5363342165947	3	304.537002	910.589176	-3.3531	-0.0010211	1.0171	0.00030975	-2.336	-0.00071139	304.5373347061743	16.229	0.4124	16.229	16.024	16.437	0					23	12	2	0	0	0	0.89198	1	6743	6743		0	0	1	2238200	+		39506	9388	19420	19503	45839	45839					0.13030512327384258
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.5362121462822	3	304.537002	910.589176	-3.2617	-0.0009933	0.51399	0.00015653	-2.7477	-0.00083677	304.5371025920972	18.271	1.1714	18.271	17.78	18.951	0					108	40	4	0	0	0	0.89198	5	7496	7496;7537;7580;7632;7683		0	0	1	6086400	+		39507	9388	19420	19503	45840;45841;45842;45843;45844	45840					0.13030512327384258
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2484619021416	3	304.537002	910.589176	-2.362	-0.0007193	0.27692	8.4332E-05	-2.085	-0.00063497	304.5373302787011	39.277	0.40549	39.277	38.984	39.39	0					19	12	2	0	0	0	2.3239	1	16389	16389		0	0	1	317130	+		39508	9388	19420	19503	45845	45845					0.13030512327384258
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2481872439384	3	304.537002	910.589176	-3.3531	-0.0010211	1.0171	0.00030975	-2.336	-0.00071139	304.5373347061743	16.229	0.4124	16.229	16.024	16.437	0					23	12	2	0	0	0	2.3239	1	6770	6770		0	0	1	2238200	+		39509	9388	19420	19503	45846	45846					0.13030512327384258
VPLPLFLI	8	Unmodified	_VPLPLFLI_					0	0	0			REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	REV__ENST00000494579.1_1_5:141974857-142077603:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	304.5382873415947	3	304.537002	910.589176	-0.27764	-8.4553E-05	0.1073	3.2676E-05	-0.17035	-5.1877E-05	304.53701109160926	28.68	0.48975	29.963	29.579	30.069	1.2825					22	15	2	0	0	0	0.89198	1	12011	12011		0	0	1	1115000	+		39510	9388	19420	19503	45847	45847					0.13030512327384258
VPLPLLFL	8	Unmodified	_VPLPLLFL_					0	0	0			REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2485839724541	3	304.537002	910.589176	0.37253	0.00011345	-0.6692	-0.00020379	-0.29666	-9.0345E-05	304.53683338622034	28.812	0.91211	29.091	28.769	29.681	0.2793					65	29	4	0	0	0	2.3239	1	11983	11983		0	0	1	2866400	+		39511	13184	19421	19504	45848	45848					0.1303051232736152
VPLPLLFL	8	Unmodified	_VPLPLLFL_					0	0	0			REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483398318291	3	304.537002	910.589176	0.11934	3.6343E-05	-0.1922	-5.8532E-05	-0.07286	-2.2189E-05	304.53698241951923	29.632	1.3833	31.431	30.989	32.372	1.7987					58	44	2	0	0	0	2.3239	1	12569	12569		0	0	1	2336000	+		39512	13184	19421	19504	45849	45849					0.1303051232736152
VPLPLLFL	8	Unmodified	_VPLPLLFL_					0	0	0			REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	REV__ENST00000459925.1_1_16:67702005-67702500:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	304.537002	910.589176	-0.43828	-0.00013347	1.2895	0.0003927	0.85123	0.00025923	304.53752246873603	30.143	1.2349	31.425	30.98	32.215	1.2825	-0.0027342	0.00068261	NaN	0	66	39	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2044900	+		39513	13184	19421	19504							0.1303051232736152
VPLPLLLL	8	Unmodified	_VPLPLLLL_					0	0	0		nc|ENSG00000077942|P23142-2|FBLN1;nc|ENSG00000077942|P23142-3|FBLN1;nc|ENSG00000077942|P23142-4|FBLN1;ENSG00000077942|ENST00000327858|FBLN1	REV__ENSG00000180644|ENST00000441259|PRF1	REV__ENSG00000180644|ENST00000441259|PRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	439.3502990603447	2	439.30969	876.604826	0.80769	0.00035482	0.93117	0.00040907	1.7389	0.00076389	439.31033695565924	109.26	0.16313	109.26	109.17	109.33	0					10	6	2	0	0	0	2.3239	1	47202	47202		0.79363	0	1	8160800			39514	968	19422	19505	45850	45850					0.16158798844423927
VPLRPARPWRW	11	Unmodified	_VPLRPARPWRW_					0	0	0			REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	717.9232055544853	2	717.41748	1432.82041	3.6322	0.0026058	4.2251	0.0030312	7.8574	0.005637	717.9207879820788	91.904	0.31255	92.84	92.706	93.019	0.93624					18	9	3	0	0	0	0.89563	1	38696	38696		10.074	3.3508	1	1276700	+		39515	13674	19423	19506	45851	45851					0.12130953081759799
VPLRPARPWRW	11	Unmodified	_VPLRPARPWRW_					0	0	0			REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	717.41748	1432.82041	3.6322	0.0026058	4.2251	0.0030312	7.8574	0.005637	717.9207879820788	91.904	0.31255	92.84	92.706	93.019	0.93624	0.030987	0.001367	NaN	10.074	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1276700	+		39516	13674	19423	19506							0.12130953081759799
VPLRPARPWRW	11	Unmodified	_VPLRPARPWRW_					0	0	0			REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	REV__ENST00000527224.1_1_11:65837982-65838258:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	717.41748	1432.82041	2.6594	0.0019079	2.4681	0.0017707	5.1275	0.0036785	717.4197969502327	91.412	0.24593	92.778	92.686	92.932	1.366	-0.030987	-0.0011541	NaN	10.074	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1160400	+		39517	13674	19423	19506							0.12130953081759799
VPLRPPKA	8	Unmodified	_VPLRPPKA_					0	0	0			REV__ENST00000541899.1_1_11:71816948-71817176:+|nuORF	REV__ENST00000541899.1_1_11:71816948-71817176:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	439.2848083376884	2	439.284537	876.554522	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.745	1	57.713	57.213	58.213	1.9684								0	0	0	1.0178	1	23377	23377		0.69038	0	1		+		39518	12345	19424	19507	45852	45852					0.11130689239269032
VPMKEPQEL	9	Unmodified	_VPMKEPQEL_					0	0	0			REV__ENST00000504949.1_1_5:95067575-95091515:+|nuORF	REV__ENST00000504949.1_1_5:95067575-95091515:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	535.3262817263603	2	535.781167	1069.54778	1.4247	0.00076331	1.1315	0.00060625	2.5562	0.0013696	535.7833076663372	70.554	0.24874	70.877	70.799	71.048	0.32224					10	6	2	0	0	0	0.11787	1	29525	29525		5.2307	0	1	767730	+		39519	10729	19425	19508	45853	45853					0.015789635057444684
VPMLLRQQ	8	Unmodified	_VPMLLRQQ_					0	0	0		ENST00000243457.3_1_17:68165680-68170994:+|nuORF	ENST00000243457.3_1_17:68165680-68170994:+|nuORF	ENST00000243457.3_1_17:68165680-68170994:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	328.1611205935478	3	328.86015	983.558621	0.21639	7.1161E-05	-1.297	-0.00042653	-1.0806	-0.00035537	328.8594459118529	24.521	0.15047	24.764	24.654	24.804	0.24251					7	4	2	0	0	0	2.3239	1	10242	10242		0.45834	0	1	214160			39520	5571	19426	19509	45854	45854					0.06618410670682806
VPPGRERMCL	10	Unmodified	_VPPGRERMCL_					0	0	0		ENST00000401884.5_2_2:241974133-241976762:+|nuORF	ENST00000401884.5_2_2:241974133-241976762:+|nuORF	ENST00000401884.5_2_2:241974133-241976762:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.3044921755791	2	579.299536	1156.58452	3.3217	0.0019243	3.3368	0.001933	6.6586	0.0038573	579.3014721010651	72.864	0.62309	74.194	73.883	74.506	1.3298					54	19	4	0	0	0	0.62746	1	30569	30569		21.747	2.4897	1	3798300			39521	6347	19427	19510	45855	45855					0.012489368506521714
VPPGYSIKVF	10	Unmodified	_VPPGYSIKVF_					0	0	0		ENSG00000137834|ENST00000288840|SMAD6;nc|ENSG00000137834|O43541-2|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	ENSG00000137834|ENST00000288840|SMAD6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8176147341728	2	553.815867	1105.61718	2.7827	0.0015411	-0.10967	-6.0736E-05	2.673	0.0014804	553.8156747970514	82.841	0.55516	84.053	83.858	84.413	1.2125					54	17	4	0	0	0	0.24174	1	34730	34730		43.858	2.0187	1	8795600			39522	2793	19428	19511	45856	45856					0.06859790516796238
VPPKPKVPP	9	Unmodified	_VPPKPKVPP_					0	0	0			REV__ARHGAP35|p.N1348Tfs*14|1|0.33|ENSG00000160007|chr19:46999308-46999308|C/-|frameshift_variant	REV__ARHGAP35|p.N1348Tfs*14|1|0.33|ENSG00000160007|chr19:46999308-46999308|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	320.2073852419853	3	320.207656	957.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.848	1	74.173	73.673	74.673	0.32494								0	0	0	0.42693	1	30893	30893		0.26902	0	1		+		39523	8138	19429	19512	45857	45857					0.12064129070563467
VPPLTTLGI	9	Unmodified	_VPPLTTLGI_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.7850524783134	2	455.784036	909.553519	1.7939	0.00081764	0.48829	0.00022255	2.2822	0.0010402	455.78471650035675	66.106	0.41562	66.106	65.87	66.285	0					23	12	2	0	0	0	0.44535	1	27500	27500		18.135	0	1	1893500	+		39524	9952	19430	19513	45858	45858					0.09512430079701062
VPPLTTLGI	9	Unmodified	_VPPLTTLGI_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	910.5619994997978	1	910.560795	909.553519	1.9913	0.0018132	-0.32213	-0.00029331	1.6692	0.0015199	910.5600679375635	65.608	0.4715	65.935	65.707	66.179	0.32688					25	14	2	0	0	0	0.44535	1	27508	27508		18.135	1.1927	1	1048600	+		39525	9952	19430	19513	45859	45859					0.09512430079701062
VPPLTTLGI	9	Unmodified	_VPPLTTLGI_					0	0	0			REV__ENSG00000135723|ENST00000258201|FHOD1	REV__ENSG00000135723|ENST00000258201|FHOD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	455.7867614626884	2	455.784036	909.553519	2.5219	0.0011494	0.14384	6.5559E-05	2.6657	0.001215	455.78433481142514	65.649	0.47264	65.976	65.674	66.147	0.32689					33	14	3	0	0	0	0.44535	1	27548	27548		18.135	5.6034	1	1698300	+		39526	9952	19430	19513	45860	45860					0.09512430079701062
VPPLVWKLGW	10	Unmodified	_VPPLVWKLGW_					0	0	0		ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	ENSG00000197386|ENST00000355072|HTT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8583862185478	2	597.855327	1193.6961	3.4736	0.0020767	0.94402	0.00056439	4.4176	0.0026411	597.8557675871057	73.822	2.6041	75.14	73.992	76.597	1.318					144	83	3	0	0	0	0.87699	1	31132	31132		3.9444	0.3479	1	2054400			39527	5001	19431	19514	45861	45861					0.1070006254171858
VPPNTKLLH	9	Unmodified	_VPPNTKLLH_					0	0	0			REV__nc|ENSG00000155657|Q8WZ42-6|TTN	REV__nc|ENSG00000155657|Q8WZ42-6|TTN	MSMS	GG20161007_CRH_Patient100_A02_02	2	509.8048278689384	2	509.805834	1017.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.833	1	66.158	65.658	66.658	0.32449								0	0	0	0.42693	1	27565	27565		5.2307	2.3415	1		+		39528	14466	19432	19515	45862	45862					0.08902039576844345
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	347.1995422244072	2	347.200139	692.385725	-0.84085	-0.00029194	-0.48149	-0.00016717	-1.3223	-0.00045912	347.200043018249	61.503	0.41048	61.503	61.362	61.772	0					24	12	2	0	0	0	0.89198	3	25636	25636;25688;25747		0	0	1	5093500	+		39529	11176	19433	19516	45863;45864;45865	45863					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	347.1999389529228	2	347.200139	692.385725	1.8408	0.00063913	-2.3321	-0.00080969	-0.49126	-0.00017057	347.1993966858859	60.281	1.2917	60.609	59.626	60.918	0.32809					74	41	3	0	0	0	0.89198	1	25311	25311		0	0	1	2331200	+		39530	11176	19433	19516	45866	45866					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.1994811892509	2	347.200139	692.385725	1.1761	0.00040835	-1.8959	-0.00065825	-0.71975	-0.0002499	347.1994768176666	59.316	0.85478	60.735	60.166	61.02	1.4196					61	27	3	0	0	0	0.89198	2	24839	24839;24899		0	0	1	3545400	+		39531	11176	19433	19516	45867;45868	45867					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	347.1998474001884	2	347.200139	692.385725	1.7555	0.00060951	-2.3209	-0.00080581	-0.56538	-0.0001963	347.1993239202296	60.436	0.88888	61.855	61.328	62.217	1.4196					58	28	3	0	0	0	0.89198	3	25316	25316;25367;25416		0	0	1	5153100	+		39532	11176	19433	19516	45869;45870;45871	45869					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.1994506716728	2	347.200139	692.385725	1.9229	0.00066763	-2.7534	-0.00095599	-0.83051	-0.00028835	347.19918218169306	58.881	0.70684	60.85	60.487	61.193	1.969					49	22	3	0	0	0	0.89198	2	24678	24678;24757		0	0	1	2407500	+		39533	11176	19433	19516	45872;45873	45872					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2010681033134	2	347.200139	692.385725	2.6718	0.00092765	-2.6623	-0.00092436	0.0094759	3.29E-06	347.1993410310345	60.06	0.53307	62.026	61.759	62.292	1.9653					42	16	3	0	0	0	0.89198	3	25169	25169;25221;25275		0	0	1	4465800	+		39534	11176	19433	19516	45874;45875;45876	45874					0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	347.200139	692.385725	-0.91576	-0.00031795	-0.21157	-7.3457E-05	-1.1273	-0.00039141	347.20008181741593	60.507	0.51021	60.507	60.287	60.797	0	-0.16841	0.0011134	NaN	0	26	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1942700	+		39535	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	347.200139	692.385725	-0.84085	-0.00029194	-0.48149	-0.00016717	-1.3223	-0.00045912	347.200043018249	61.503	0.41048	61.503	61.362	61.772	0	-0.29139	0.00090403	NaN	0	24	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5093500	+		39536	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	347.200139	692.385725	1.8408	0.00063913	-2.3321	-0.00080969	-0.49126	-0.00017057	347.1993966858859	60.281	1.2917	60.609	59.626	60.918	0.32809	-0.06607	-0.00035907	NaN	0	74	41	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2331200	+		39537	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	347.200139	692.385725	1.1761	0.00040835	-1.8959	-0.00065825	-0.71975	-0.0002499	347.1994768176666	59.316	0.85478	60.735	60.166	61.02	1.4196	0.059652	-5.6184E-05	NaN	0	61	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3545400	+		39538	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	347.200139	692.385725	1.7555	0.00060951	-2.3209	-0.00080581	-0.56538	-0.0001963	347.1993239202296	60.436	0.88888	61.855	61.328	62.217	1.4196	0.060443	-0.00037323	NaN	0	58	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5153100	+		39539	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	347.200139	692.385725	1.9229	0.00066763	-2.7534	-0.00095599	-0.83051	-0.00028835	347.19918218169306	58.881	0.70684	60.85	60.487	61.193	1.969	0.17482	-0.00065166	NaN	0	49	22	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2407500	+		39540	11176	19433	19516							0.027227876057395406
VPPPAAAA	8	Unmodified	_VPPPAAAA_					0	0	0			REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	REV__nc|ENSG00000176208|Q96QE3-2|ATAD5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	347.200139	692.385725	2.6718	0.00092765	-2.6623	-0.00092436	0.0094759	3.29E-06	347.1993410310345	60.06	0.53307	62.026	61.759	62.292	1.9653	0.23095	-0.00061035	NaN	0	42	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4465800	+		39541	11176	19433	19516							0.027227876057395406
VPPPLLGV	8	Unmodified	_VPPPLLGV_					0	0	0			REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	396.2555114626884	2	396.254914	790.495276	-0.417	-0.00016524	2.998	0.001188	2.581	0.0010227	396.2562636766861	100.89	0.12564	100.89	100.81	100.94	0					5	3	2	0	0	0	0.89198	1	42247	42247		0	0	1	1988800	+		39542	12126	19434	19517	45877	45877					0.0916479322510213
VPPPLLGV	8	Unmodified	_VPPPLLGV_					0	0	0			REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	396.254914	790.495276	-0.417	-0.00016524	2.998	0.001188	2.581	0.0010227	396.2562636766861	100.89	0.12564	100.89	100.81	100.94	0	-0.015542	-0.00072158	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1988800	+		39543	12126	19434	19517							0.0916479322510213
VPPPLLGV	8	Unmodified	_VPPPLLGV_					0	0	0			REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	REV__ENST00000243050.5_1_12:52445232-52448188:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	396.254914	790.495276	2.8091	0.0011131	4.308	0.0017071	7.1171	0.0028202	396.256831181007	100.85	0.25165	100.92	100.81	101.06	0.067009	0.015542	0.00031663	NaN	0	12	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1771900	+		39544	12126	19434	19517							0.0916479322510213
VPPPLLLL	8	Unmodified	_VPPPLLLL_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	430.8388549685478	2	431.29404	860.573526	0.58204	0.00025103	0.083552	3.6035E-05	0.66559	0.00028707	431.2946131922188	109.02	0.12608	109.02	108.96	109.08	0					8	5	2	0	0	0	2.3239	1	47124	47124		0	0	1	2344300			39545	1496	19435	19518	45878	45878					0.13766225810343258
VPPPLLLL	8	Unmodified	_VPPPLLLL_					0	0	0		ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	ENSG00000105088|ENST00000264833|OLFM2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	431.29404	860.573526	3.1241	0.0013474	-0.96165	-0.00041475	2.1624	0.00093265	431.29452841369516	109.02	0.11253	109.07	109	109.11	0.050652	0.023183	-0.00052536	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1345500			39546	1496	19435	19518							0.13766225810343258
VPPPPPAK	8	Unmodified	_VPPPPPAK_					0	0	0			REV__ENSG00000116128|ENST00000234739|BCL9	REV__ENSG00000116128|ENST00000234739|BCL9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1805297732353	2	401.744714	801.474875	0.47549	0.00019102	-1.983	-0.00079667	-1.5075	-0.00060565	401.742792676169	92.969	0.30699	92.969	92.831	93.138	0					14	9	2	0	0	0	2.3239	1	38913	38913		0	0	1	875490	+		39547	9467	19436	19519	45879	45879					0.06619622565267491
VPPPPSRG	8	Unmodified	_VPPPPSRG_					0	0	0		ENSG00000183287|ENST00000439986|CCBE1	REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.2310058474541	2	403.729595	805.444637	0.52436	0.0002117	3.8554	0.0015565	4.3797	0.0017682	403.7328308222358	58.314	0.86986	58.314	57.753	58.623	0					50	26	3	0	0	0	0.89051	1	24326	24326		2.3027	0	1	1056000			39548	4645	19437	19520	45880	45880					0.03413263900097263
VPPPPSRG	8	Unmodified	_VPPPPSRG_					0	0	0		ENSG00000183287|ENST00000439986|CCBE1	REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	REV__ENST00000221232.9_1_19:54641535-54647226:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	403.729595	805.444637	2.4747	0.00099912	4.5654	0.0018432	7.0401	0.0028423	403.7322145348031	57.643	0.66837	57.966	57.474	58.142	0.32298	-0.17432	0.00027997	NaN	2.3027	28	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1243300			39549	4645	19437	19520							0.03413263900097263
VPPVFLGP	8	Unmodified	_VPPVFLGP_					0	0	0			REV__ENST00000515737.5_1_4:2825262-2835558:+|nuORF	REV__ENST00000515737.5_1_4:2825262-2835558:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	413.2487060427666	2	413.247089	824.479626	0.067053	2.771E-05	1.9284	0.0007969	1.9954	0.00082461	413.2482074931343	104.54	0.089249	104.54	104.47	104.56	0					7	4	2	0	0	0	2.3239	1	44149	44149		0	0	1	40624000	+		39550	8868	19438	19521	45881	45881					0.060365067080510926
VPQLQVTTV	9	Unmodified	_VPQLQVTTV_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7910339236259	2	492.78985	983.565146	1.8866	0.00092969	0.36802	0.00018136	2.2546	0.001111	492.7899129113116	54.126	0.61781	56.094	55.877	56.495	1.9684					25	19	3	0	0	0	0.5697	1	22638	22638		12.532	0.89125	1	1702500	+		39551	11677	19439	19522	45882	45882					0.07270627103036986
VPQLQVTTV	9	Unmodified	_VPQLQVTTV_					0	0	0			REV__ENSG00000197483|ENST00000598519|ZNF628	REV__ENSG00000197483|ENST00000598519|ZNF628	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	492.78985	983.565146	1.6985	0.00083701	0.54557	0.00026885	2.2441	0.0011059	492.78998130624916	54.632	0.3174	56.037	55.835	56.152	1.4048	-0.02878	8.6512E-05	NaN	12.532	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1789300	+		39552	11677	19439	19522							0.07270627103036986
VPRECLEL	8	Unmodified	_VPRECLEL_					0	0	0			REV__ENST00000587153.1_1_18:21083537-21084412:+|nuORF	REV__ENST00000587153.1_1_18:21083537-21084412:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	479.7578918337822	2	479.754953	957.495352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.057	1	65.464	64.964	65.964	1.4071								0	0	0	1.0178	1	26863	26863		42.095	7.9921	1		+		39553	10150	19440	19523	45883	45883					0.014904251627626763
VPRKRRVIK	9	Unmodified	_VPRKRRVIK_					0	0	0			REV__LRRIQ1|p.E1195Kfs*10|1|0.44|ENSG00000133640|chr12:85124094-85124094|A/-|frameshift_variant	REV__LRRIQ1|p.E1195Kfs*10|1|0.44|ENSG00000133640|chr12:85124094-85124094|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3971435427666	2	576.396016	1150.77748	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.831	1	78.831	78.331	79.331	0								0	0	0	0.42693	1	32815	32815		2.0598	0	1		+		39554	9877	19441	19524	45884	45884					0.20812183024349906
VPRLAIPASL	10	Unmodified	_VPRLAIPASL_					0	0	0		MRC2|p.T65Pfs*53|1|0.29|ENSG00000011028|chr17:62664621-62664621|C/-|frameshift_variant	MRC2|p.T65Pfs*53|1|0.29|ENSG00000011028|chr17:62664621-62664621|C/-|frameshift_variant	MRC2|p.T65Pfs*53|1|0.29|ENSG00000011028|chr17:62664621-62664621|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2230102419853	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.481	1	76.802	76.302	77.302	0.32163								0	0	0	0.66222	1	31988	31988		0.69767	0	1				39555	7800	19442	19525	45885	45885					0.12766899127996112
VPRLIRLIR	9	Unmodified	_VPRLIRLIR_					0	0	0		nc|ENSG00000196511|Q9H3S4-2|TPK1;ENST00000482940.5_1_7:144150752-144304024:-|nuORF	nc|ENSG00000196511|Q9H3S4-2|TPK1	nc|ENSG00000196511|Q9H3S4-2|TPK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	379.2646057009697	3	379.264387	1134.77133	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.68	1	114.86	114.36	115.36	0.18399								0	0	0	0.42693	1	49681	49681		0	0	1				39556	6837	19443	19526	45886	45886					0.20933664792823947
VPRRKRKVL	9	Unmodified	_VPRRKRKVL_					0	0	0		ENSG00000136237|ENST00000665637|RAPGEF5;nc|ENSG00000136237|Q92565|RAPGEF5;nc|ENSG00000136237|Q92565-2|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	ENSG00000136237|ENST00000665637|RAPGEF5	MSMS	GG20161007_CRH_Patient100_A02_01	1	576.3983642458916	2	576.396016	1150.77748	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.832	1	79.832	79.332	80.332	0								0	0	0	0.42693	1	33241	33241		0.6015	0	1				39557	2714	19444	19527	45887	45887					0.20812183024372644
VPRRLGPVFEI	11	Unmodified	_VPRRLGPVFEI_					0	0	0			REV__ENST00000519690.1_1_5:149829058-149829289:-|nuORF	REV__ENST00000519690.1_1_5:149829058-149829289:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8846923708916	2	641.885147	1281.75574	1.4898	0.00095626	-2.3386	-0.0015011	-0.84886	-0.00054487	641.8838270268691	77.925	1.6654	79.677	79.073	80.738	1.7514					106	53	3	0	0	0	1.0174	1	32648	32648		2.7352	0.23671	1	2328100	+		39558	13618	19445	19528	45888	45888					0.12613333485114708
VPRRLLVRRR	10	Unmodified	_VPRRLLVRRR_					0	0	0			REV__ENST00000534961.5_1_8:42742976-42751856:-|nuORF	REV__ENST00000534961.5_1_8:42742976-42751856:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	660.9454223513603	2	660.944196	1319.87384	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.268	1	19.268	18.768	19.768	0								0	0	0	0.6624	1	8007	8007		0.40072	0	1		+		39559	13738	19446	19529	45889	45889					0.22669750584304893
VPRVETKL	8	Unmodified	_VPRVETKL_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-4|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.1963989138603	3	314.530798	940.570566	0.16264	5.1156E-05	2.7111	0.00085273	2.8738	0.00090389	314.53066299255806	24.989	0.30909	25.241	25.119	25.428	0.25197					13	9	2	0	0	0	2.3239	1	10468	10468		1.6526	0.45928	1	234800			39560	2055	19447	19530	45890	45890					0.09790350685523208
VPRVETKL	8	Unmodified	_VPRVETKL_					0	0	0		ENSG00000118997|ENST00000312428|DNAH7;nc|ENSG00000118997|Q8WXX0-4|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	ENSG00000118997|ENST00000312428|DNAH7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.1962463259697	3	314.530798	940.570566	-0.11329	-3.5633E-05	-0.77668	-0.00024429	-0.88997	-0.00027992	314.53055440181186	23.769	0.14391	25.449	25.356	25.5	1.6804					6	4	2	0	0	0	2.3239	1	9929	9929		1.6526	1.2519	1	253540			39561	2055	19447	19530	45891	45891					0.09790350685523208
VPRVGGLL	8	Unmodified	_VPRVGGLL_					0	0	0		ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	810.5208618044853	1	810.519599	809.512323	2.7773	0.0022511	0.063126	5.1165E-05	2.8404	0.0023022	810.51947104557	107.13	0.15109	107.29	107.19	107.34	0.15781					13	6	3	0	0	0	0.89176	1	46000	46000		0.79363	0	1	16224000			39562	4924	19448	19531	45892	45892					0.0999471383091759
VPRVGGLL	8	Unmodified	_VPRVGGLL_					0	0	0		ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	810.5200073122978	1	810.519599	809.512323	2.9286	0.0023737	0.012464	1.0103E-05	2.9411	0.0023838	810.519590453087	107.08	0.17079	107.24	107.15	107.32	0.16174					15	7	3	0	0	0	0.89176	1	45946	45946		0.79363	0	1	10374000			39563	4924	19448	19531	45893	45893					0.0999471383091759
VPRVGGLL	8	Unmodified	_VPRVGGLL_					0	0	0		ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	810.519599	809.512323	1.2673	0.0010272	0.68611	0.00055611	1.9534	0.0015833	810.5194038568428	107.18	0.11809	107.18	107.11	107.23	0	-0.048101	0.00054848	NaN	0.79363	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10437000			39564	4924	19448	19531							0.0999471383091759
VPRVGGLL	8	Unmodified	_VPRVGGLL_					0	0	0		ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	ENSG00000196227|ENST00000360816|FAM217B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	810.519599	809.512323	2.7603	0.0022373	-0.54582	-0.0004424	2.2145	0.0017949	810.5194945490326	107.14	0.13342	107.19	107.12	107.25	0.052452	-0.032967	-0.00045003	NaN	0.79363	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4597000			39565	4924	19448	19531							0.0999471383091759
VPRVLLIH	8	Unmodified	_VPRVLLIH_					0	0	0		ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2118408083916	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.94	1	20.133	19.633	20.633	0.19342								0	0	0	1.0178	1	8285	8285		0	0	1				39566	7289	19449	19532	45894	45894					0.13738951164714308
VPRVLLIH	8	Unmodified	_VPRVLLIH_					0	0	0		ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	316.2125732302666	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.217	1	84.478	83.978	84.978	0.26083								0	0	0	1.0178	1	35224	35224		0	0	1				39567	7289	19449	19532	45895	45895					0.13738951164714308
VPRVLLIH	8	Unmodified	_VPRVLLIH_					0	0	0		ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	ENST00000554456.1_1_14:58711972-58712140:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	316.2120239138603	3	316.2114	945.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.111	1	20.635	20.135	21.135	1.5237								0	0	0	1.0178	1	7945	7945		0	0	1				39568	7289	19449	19532	45896	45896					0.13738951164714308
VPSCLLVSIVW	11	Unmodified	_VPSCLLVSIVW_					0	0	0		ENST00000546203.5_1_9:131218777-131231529:+|nuORF	ENST00000546203.5_1_9:131218777-131231529:+|nuORF	ENST00000546203.5_1_9:131218777-131231529:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1215.685229480267	1	1215.68059	1214.67332	2.3835	0.0028976	1.584	0.0019256	3.9675	0.0048232	1215.682150199561	103.53	0.12454	103.71	103.66	103.78	0.18066					12	5	3	0	0	0	1.0084	1	43640	43640		3.2813	0	1	15587000			39569	7240	19450	19533	45897	45897					0.07456675361959242
VPSISKEAGFF	11	Unmodified	_VPSISKEAGFF_					0	0	0			REV__ENST00000225388.8_1_17:27590235-27590331:-|nuORF	REV__ENST00000225388.8_1_17:27590235-27590331:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	591.2709838747978	2	591.313689	1180.61282	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.423	1	89.48	88.98	89.98	1.0562								0	0	0	0.63764	1	37281	37281		19.257	5.3509	1		+		39570	12086	19451	19534	45898	45898					0.029742813032271442
VPSLSVPWLQ	10	Unmodified	_VPSLSVPWLQ_					0	0	0		ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	ENSG00000152464|ENST00000378197|RPP38	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3210327029228	2	563.318774	1124.623	3.9783	0.0022411	-1.8681	-0.0010523	2.1103	0.0011888	563.3179556395247	86.909	0.55219	88.001	87.845	88.398	1.0918					34	18	3	0	0	0	0.44465	1	36629	36629		30.637	5.2372	1	3104000			39571	3329	19452	19535	45899	45899					0.06566889028476908
VPSSVGVG	8	Unmodified	_VPSSVGVG_					0	0	0		tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.1960632205009	2	351.195054	700.375555	0.030313	1.0646E-05	3.6705	0.001289	3.7008	0.0012997	351.1962718656698	16.322	0.17636	16.452	16.355	16.531	0.13022					9	6	2	0	0	0	0.89198	1	6773	6773		0	0	1	451940			39572	16146	19453	19536	45900	45900					0.013381798805426115
VPSSVGVG	8	Unmodified	_VPSSVGVG_					0	0	0		tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	tr|A0A553SHE6|A0A553SHE6_NIACI33kDachaperoninOS=NialliacirculansOX=1397GN=hslOPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	351.195054	700.375555	-2.257	-0.00079263	5.2078	0.001829	2.9508	0.0010363	351.1968791674548	16.42	0.19156	16.42	16.309	16.5	0	-0.016179	0.00050831	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	453160			39573	16146	19453	19536							0.013381798805426115
VPSTPRRG	8	Unmodified	_VPSTPRRG_					0	0	0		ENSG00000139405|ENST00000548278|RITA1;nc|ENSG00000139405|Q96K30-3|RITA1	ENSG00000139405|ENST00000548278|RITA1	ENSG00000139405|ENST00000548278|RITA1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.2514221072197	2	435.251226	868.487899	1.323	0.00057585	0.33949	0.00014776	1.6625	0.00072361	435.2513213570086	74.889	0.94335	74.889	74.399	75.342	0					53	29	3	0	0	0	0.89008	3	31135	31135;31181;31235		2.5775	0	1	9641400			39574	2876	19454	19537	45901;45902;45903	45901					0.04839453677379879
VPTFYLPYF	9	Unmodified	_VPTFYLPYF_					0	0	0		ENSG00000259803|ENST00000682282|SLC22A31;nc|ENSG00000259803|A6NKX4|SLC22A31	ENSG00000259803|ENST00000682282|SLC22A31	ENSG00000259803|ENST00000682282|SLC22A31	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	574.2859985232353	2	573.797143	1145.57973	1.6518	0.00094778	1.6716	0.00095915	3.3233	0.0019069	574.301140623498	54.639	0.38077	56.044	55.771	56.152	1.4048					18	11	2	0	0	0	0.116	1	22904	22904		2.3027	0.4585	1	4252900			39575	5414	19455	19538	45904	45904					0.012766992511842545
VPTKGKLS	8	Unmodified	_VPTKGKLS_					0	0	0			REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2598449587822	2	415.260728	828.506903	2.0156	0.000837	-3.4747	-0.0014429	-1.4591	-0.00060592	415.2591388800214	78.305	0.54134	78.614	78.323	78.864	0.30932					36	16	3	0	0	0	0.89176	1	32777	32777		0.79363	0	1	3099800	+		39576	13902	19456	19539	45905	45905					0.08578990248417995
VPTKGKLS	8	Unmodified	_VPTKGKLS_					0	0	0			REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2602416872978	2	415.260728	828.506903	2.3306	0.00096781	-3.2041	-0.0013305	-0.87352	-0.00036274	415.25915405739903	77.373	0.50999	78.654	78.313	78.823	1.2809					35	15	3	0	0	0	0.88958	2	32456	32456;32506		2.8892	0	1	1531200	+		39577	13902	19456	19539	45906;45907	45906					0.08578990248417995
VPTKGKLS	8	Unmodified	_VPTKGKLS_					0	0	0			REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	REV__ENST00000561818.1_1_15:42455822-42456706:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2602722048759	2	415.260728	828.506903	1.7158	0.00071252	-3.2784	-0.0013614	-1.5626	-0.00064889	415.2591536787977	76.968	0.44868	78.728	78.506	78.955	1.7598					29	13	3	0	0	0	0.88958	1	32271	32271		2.8892	0	1	1640900	+		39578	13902	19456	19539	45908	45908					0.08578990248417995
VPTPELVK	8	Unmodified	_VPTPELVK_					0	0	0			REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.7709838747978	2	441.768386	881.522219	1.3415	0.00059265	2.9807	0.0013168	4.3222	0.0019094	441.7696603878943	25.357	0.18464	25.609	25.52	25.705	0.25197					7	5	2	0	0	0	0.89178	1	10602	10602		0.69038	0	1	251480	+		39579	15345	19457	19540	45909	45909					0.07671857045625075
VPTPELVK	8	Unmodified	_VPTPELVK_					0	0	0			REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	441.768386	881.522219	0.73804	0.00032604	4.7067	0.0020793	5.4448	0.0024053	441.7707120594186	25.784	0.15384	25.784	25.687	25.841	0	0.20401	0.0010121	NaN	0.69038	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	237660	+		39580	15345	19457	19540							0.07671857045625075
VPTPELVK	8	Unmodified	_VPTPELVK_					0	0	0			REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	441.768386	881.522219	1.3415	0.00059265	2.9807	0.0013168	4.3222	0.0019094	441.7696603878943	25.357	0.18464	25.609	25.52	25.705	0.25197	0.028964	-0.00051295	NaN	0.69038	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	251480	+		39581	15345	19457	19540							0.07671857045625075
VPTPELVK	8	Unmodified	_VPTPELVK_					0	0	0			REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	441.768386	881.522219	1.6152	0.00071354	2.7595	0.001219	4.3747	0.0019326	441.7698176340391	24.198	0.12277	25.439	25.362	25.485	1.241	-0.14092	-0.00070839	NaN	0.69038	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	289140	+		39582	15345	19457	19540							0.07671857045625075
VPTPELVK	8	Unmodified	_VPTPELVK_					0	0	0			REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	REV__tr|A0A7D6VNW9|A0A7D6VNW9_9CLOTPhospho-sugarmutaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14760PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	441.768386	881.522219	0.68637	0.00030322	3.4162	0.0015092	4.1025	0.0018124	441.7696856125037	23.803	0.1491	25.488	25.387	25.536	1.6845	-0.092061	-0.00012817	NaN	0.69038	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	308280	+		39583	15345	19457	19540							0.07671857045625075
VPVKKVPT	8	Unmodified	_VPVKKVPT_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;TTN|p.K24185Sfs*13|1|0.09|ENSG00000155657|chr2:178568655-178568655|T/-|frameshift_variant;TTN|p.T24905Vfs*36|1|0.03|ENSG00000155657|chr2:178566497-178566498|-/GAATTCTGGCAGATCCACCAGCTCTTACA|frameshift_variant;TTN|p.Y26787Dfs*24|1|0.13|ENSG00000155657|chr2:178560850-178560851|-/CACAAGACATTGGGTACTGGTC|frameshift_variant;TTN|p.G22029Efs*22|1|0.38|ENSG00000155657|chr2:178575123-178575123|C/-|frameshift_variant;TTN|p.L22574Afs*14|1|0.2|ENSG00000155657|chr2:178573489-178573490|-/AGTTTTTTTGTTGCATTTAATCCAGCGTTGGC|frameshift_variant;TTN|p.D18828Afs*11|1|0.06|ENSG00000155657|chr2:178590319-178590320|-/G|frameshift_variant;TTN|p.E20021Dfs*34|1|0.15|ENSG00000155657|chr2:178584565-178584565|T/-|frameshift_variant;TTN|p.K15149Rfs*5|1|0.07|ENSG00000155657|chr2:178611942-178611942|C/-|frameshift_variant;TTN|p.P12974Lfs*4|1|0.05|ENSG00000155657|chr2:178631204-178631205|-/GTACA|frameshift_variant	ENSG00000155657|ENST00000589042|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	867.5689575076103	1	867.566215	866.558939	3.0349	0.002633	-0.29607	-0.00025686	2.7389	0.0023761	867.5658850375719	106.15	0.10808	106.31	106.26	106.37	0.15781					17	5	4	0	0	0	0.89178	1	45399	45399		0.69038	0	1	62438000			39584	3425	19458	19541	45910	45910					0.12032153662175915
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2430602908134	3	351.242366	1050.70527	0.085562	3.0053E-05	2.1527	0.00075613	2.2383	0.00078618	351.2432691140426	17.318	1.491	17.469	17.151	18.642	0.15093					166	53	6	0	0	0	0.89803	1	7176	7176		0.15932	0	1	243130000	+		39585	14502	19459	19542	45911	45911					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2440978884697	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89803	3	8130	8130;8247;8297		0.15932	0	1	155460000	+		39586	14502	19459	19542	45912;45913;45914	45912					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2431518435478	3	351.242366	1050.70527	0.33569	0.00011791	2.3995	0.00084281	2.7352	0.00096072	351.24325833524324	21.886	1.4635	22.109	21.872	23.336	0.223					130	48	6	0	0	0	0.89803	3	9017	9017;9212;9327		0.15932	0	1	59592000	+		39587	14502	19459	19542	45915;45916;45917	45915					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2434265017509	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	3	7929	7929;7969;8168		0.15932	0	1	143590000	+		39588	14502	19459	19542	45918;45919;45920	45918					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2428466677666	3	351.242366	1050.70527	-0.17861	-6.2736E-05	1.9615	0.00068895	1.7829	0.00062622	351.2434098450176	16.233	0.9273	17.272	17.013	17.94	1.0392					119	32	6	0	0	0	0.89803	1	6708	6708		0.15932	0	1	381400000	+		39589	14502	19459	19542	45921	45921					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2429992556572	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	3	7419	7419;7698;7920		0.15932	0	1	364430000	+		39590	14502	19459	19542	45922;45923;45924	45922					0.18194411107424457
VPVLLIIVSV	10	Unmodified	_VPVLLIIVSV_					0	0	0			REV__nc|ENSG00000182477|P59922|OR2B8P	REV__nc|ENSG00000182477|P59922|OR2B8P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2431213259697	3	351.242366	1050.70527	-0.0090448	-3.1769E-06	2.3168	0.00081374	2.3077	0.00081057	351.2432799196589	20.291	1.6712	21.866	21.639	23.31	1.5748					150	55	6	0	0	0	0.89803	2	8379	8379;8556		0.15932	0	1	95744000	+		39591	14502	19459	19542	45925;45926	45925					0.18194411107424457
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2393066287041	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.106	1	32.106	31.606	32.606	0								0	0	0	0.66264	1	13450	13450		0	0	1		+		39592	10951	19460	19543	45927	45927					0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2389099001884	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.229	1	32.229	31.729	32.729	0								0	0	0	0.66264	1	13502	13502		0	0	1		+		39593	10951	19460	19543	45928	45928					0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2391540408134	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.373	1	32.373	31.873	32.873	0								0	0	0	0.66264	1	13563	13563		0	0	1		+		39594	10951	19460	19543	45929	45929					0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MSMS	GG20161007_CRH_Patient100_A02_01	1	345.2391845583916	3	345.238844	1032.6947	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.544	1	32.544	32.044	33.044	0								0	0	0	0.66264	1	13634	13634		0	0	1		+		39595	10951	19460	19543	45930	45930					0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	345.2396118044853	3	345.238844	1032.6947	-0.16276	-5.619E-05	2.7195	0.00093889	2.5568	0.0008827	345.2397768209084	27.55	0.37275	28.829	28.625	28.998	1.2789					14	11	2	0	0	0	0.89803	1	11527	11527		0.15932	0	1	1234500	+		39596	10951	19460	19543	45931	45931					0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	345.238844	1032.6947	-0.16276	-5.619E-05	2.7195	0.00093889	2.5568	0.0008827	345.2397768209084	27.55	0.37275	28.829	28.625	28.998	1.2789	0.048188	0.00020446	NaN	0.15932	14	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1234500	+		39597	10951	19460	19543							0.17966428453019034
VPVLLLLLGP	10	Unmodified	_VPVLLLLLGP_					0	0	0			REV__ENSG00000169495|ENST00000302495|HTRA4	REV__ENSG00000169495|ENST00000302495|HTRA4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	345.238844	1032.6947	0.22098	7.6292E-05	2.3843	0.00082316	2.6053	0.00089946	345.2395974474765	26.986	0.27964	28.733	28.556	28.835	1.747	-0.048188	-0.00014272	NaN	0.15932	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1188300	+		39598	10951	19460	19543							0.17966428453019034
VPVPAGTG	8	Unmodified	_VPVPAGTG_					0	0	0		ENST00000306749.3_1_17:80036521-80036779:-|nuORF	ENST00000306749.3_1_17:80036521-80036779:-|nuORF	ENST00000306749.3_1_17:80036521-80036779:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	349.1985656619072	2	349.197596	696.38064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.65	1	103.81	103.31	104.31	0.16055								0	0	0	1.0178	1	43735	43735		0.79363	0	1				39599	5781	19461	19544	45932	45932					0.02030483743158129
VPVPGATI	8	Unmodified	_VPVPGATI_					0	0	0		tr|A0A7D6VTY5|A0A7D6VTY5_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23330PE=3SV=1	tr|A0A7D6VTY5|A0A7D6VTY5_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23330PE=3SV=1	tr|A0A7D6VTY5|A0A7D6VTY5_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23330PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	377.2546874880791	2	377.228897	752.44324	-0.22288	-8.4076E-05	2.9311	0.0011057	2.7082	0.0010216	377.22965356280446	58.471	0.38791	58.471	58.235	58.623	0					17	11	2	0	0	0	2.3239	1	24333	24333		0.79363	0	1	532810			39600	16936	19462	19545	45933	45933					0.0571162981134421
VPVPVFLP	8	Unmodified	_VPVPVFLP_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	434.2717773318291	2	434.270564	866.526576	1.2951	0.00056244	-0.65492	-0.00028441	0.64022	0.00027803	434.270235919436	74.98	0.53217	74.98	74.653	75.185	0					30	16	2	0	0	0	0.88958	1	31122	31122		2.8892	0	1	2163600			39601	2138	19463	19546	45934	45934					0.08797366259182127
VPVPVFLP	8	Unmodified	_VPVPVFLP_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2714111208916	2	434.270564	866.526576	2.9324	0.0012735	-0.4157	-0.00018053	2.5167	0.0010929	434.2705599956474	74.306	0.75745	74.631	74.169	74.927	0.32464					50	23	3	0	0	0	0.88958	2	31009	31009;31114		2.8892	0	1	2532400			39602	2138	19463	19546	45935;45936	45935					0.08797366259182127
VPVPVFLP	8	Unmodified	_VPVPVFLP_					0	0	0		ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	ENSG00000121741|ENST00000610343|ZMYM2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	434.270564	866.526576	1.2951	0.00056244	-0.65492	-0.00028441	0.64022	0.00027803	434.270235919436	74.98	0.53217	74.98	74.653	75.185	0	0.17474	-0.00010433	NaN	2.8892	30	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2163600			39603	2138	19463	19546							0.08797366259182127
VPVTGGGG	8	Unmodified	_VPVTGGGG_					0	0	0		ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	643.3456298708916	1	643.340966	642.33369	2.75	0.0017692	2.8659	0.0018438	5.616	0.003613	643.3425935019044	103.86	0.11576	104.02	103.96	104.07	0.16055					18	5	4	0	0	0	0.89198	1	43868	43868		0	0	1	704050000			39604	7091	19464	19547	45937	45937					-0.0017837580797959163
VPVTGGGG	8	Unmodified	_VPVTGGGG_					0	0	0		ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	643.3452026247978	1	643.340966	642.33369	3.0751	0.0019783	2.0818	0.0013393	5.1569	0.0033177	643.3421133407226	103.8	0.1198	103.98	103.91	104.03	0.1731					18	5	4	0	0	0	0.89198	1	43789	43789		0	0	1	567610000			39605	7091	19464	19547	45938	45938					-0.0017837580797959163
VPVTGGGG	8	Unmodified	_VPVTGGGG_					0	0	0		ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	643.340966	642.33369	1.51	0.00097148	4.75	0.0030559	6.2601	0.0040274	643.3437767583399	103.94	0.1133	103.94	103.88	103.99	0	-0.032598	0.00091941	NaN	0	18	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	622060000			39606	7091	19464	19547							-0.0017837580797959163
VPVTGGGG	8	Unmodified	_VPVTGGGG_					0	0	0		ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	ENST00000522243.5_1_8:59465814-59465859:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	643.340966	642.33369	2.6629	0.0017131	3.5229	0.0022664	6.1857	0.0039795	643.343005982436	103.9	0.11298	103.96	103.9	104.01	0.059502	-0.011789	0.00012991	NaN	0	19	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	727400000			39607	7091	19464	19547							-0.0017837580797959163
VPVVFIVRR	9	Unmodified	_VPVVFIVRR_					0	0	0		nc|ENSG00000072041|Q9H2J7-3|SLC6A15;ENSG00000072041|ENST00000266682|SLC6A15	nc|ENSG00000072041|Q9H2J7-3|SLC6A15	nc|ENSG00000072041|Q9H2J7-3|SLC6A15	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.3906127810478	2	542.853119	1083.69168	3.1275	0.0016978	0.85502	0.00046415	3.9825	0.0021619	543.3526840916525	105.22	0.12009	105.37	105.29	105.41	0.15859					8	5	2	0	0	0	0.11946	1	44763	44763		0.6015	0	1	3475300			39608	876	19465	19548	45939	45939					0.1531859811882441
VPWAGRKPRG	10	Unmodified	_VPWAGRKPRG_					0	0	0		ENST00000489799.1_1_1:1309974-1310136:-|nuORF	ENST00000489799.1_1_1:1309974-1310136:-|nuORF	ENST00000489799.1_1_1:1309974-1310136:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3268310427666	2	562.327799	1122.64105	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.636	1	84.636	84.136	85.136	0								0	0	0	0.66166	1	35269	35269		1.6526	0.32309	1				39609	6899	19466	19549	45940	45940					0.08463068793821549
VPWRRRRQR	9	Unmodified	_VPWRRRRQR_					0	0	0			REV__ENST00000264010.8_1_16:67596501-67605146:+|nuORF	REV__ENST00000264010.8_1_16:67596501-67605146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2022888064384	4	328.201073	1308.77519	0.93404	0.00030655	3.4314	0.0011262	4.3655	0.0014328	328.2016249302613	37.842	0.41966	38.147	37.966	38.385	0.30497					59	20	4	0	0	0	0.81521	1	15917	15917		2.7352	0.10396	1	8489900	+		39610	12208	19467	19550	45941	45941					0.13315147339244504
VPYEKGFAL	9	Unmodified	_VPYEKGFAL_					0	0	0		ENST00000548375.5_1_12:96405582-96408866:-|nuORF;nc|ENSG00000111144|P09960-3|LTA4H;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H;ENSG00000111144|ENST00000228740|LTA4H	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	512.2810546755791	2	512.279118	1022.54368	2.6277	0.0013461	0.41047	0.00021028	3.0382	0.0015564	512.2792589497112	41.022	0.47167	42.348	42.115	42.587	1.3254					34	14	3	0	0	0	0.28863	3	17211	17160;17211;17280		34.402	16.267	1	1744900			39611	1727	19468	19551	45942;45943;45944	45943					0.03331242074330021
VPYEKGFAL	9	Unmodified	_VPYEKGFAL_					0	0	0		ENST00000548375.5_1_12:96405582-96408866:-|nuORF;nc|ENSG00000111144|P09960-3|LTA4H;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H;ENSG00000111144|ENST00000228740|LTA4H	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	512.2805663943291	2	512.279118	1022.54368	2.5289	0.0012955	0.10039	5.1427E-05	2.6293	0.0013469	512.278866304248	40.612	0.56324	42.475	42.143	42.706	1.8624					32	17	3	0	0	0	0.28863	3	17045	16994;17045;17093		34.402	13.948	1	1642700			39612	1727	19468	19551	45945;45946;45947	45946					0.03331242074330021
VPYEKGFAL	9	Unmodified	_VPYEKGFAL_					0	0	0		ENST00000548375.5_1_12:96405582-96408866:-|nuORF;nc|ENSG00000111144|P09960-3|LTA4H;ENST00000548852.5_1_12:96397735-96429337:-|nuORF;nc|ENSG00000111144|P09960-2|LTA4H;nc|ENSG00000111144|P09960-4|LTA4H;ENSG00000111144|ENST00000228740|LTA4H	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	ENST00000548375.5_1_12:96405582-96408866:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	512.279118	1022.54368	2.0115	0.0010304	-1.4111	-0.00072286	0.60039	0.00030757	512.2784174926838	42.553	0.1886	42.553	42.416	42.604	0	0.094209	-0.0015805	NaN	34.402	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	309220			39613	1727	19468	19551							0.03331242074330021
VPYITSRHV	9	Unmodified	_VPYITSRHV_					0	0	0			REV__ENSG00000110799|ENST00000261405|VWF	REV__ENSG00000110799|ENST00000261405|VWF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3025390505791	2	536.300916	1070.58728	5.5864	0.002996	-3.2181	-0.0017259	2.3683	0.0012701	536.2992071885839	88.264	0.41753	89.32	89.08	89.498	1.0562					29	12	3	0	0	0	0.64949	1	37188	37188		9.3474	0.75416	1	2650100	+		39614	9306	19469	19552	45948	45948					0.054808515714512396
VPYRRHRR	8	Unmodified	_VPYRRHRR_					0	0	0		ENST00000282120.6_1_2:85549278-85549443:-|nuORF	ENST00000282120.6_1_2:85549278-85549443:-|nuORF	ENST00000282120.6_1_2:85549278-85549443:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	570.3358032107353	2	570.33649	1138.65843	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.631	1	71.955	71.455	72.455	0.32359								0	0	0	1.0178	1	29975	29975		0.79363	0.19213	1				39615	5704	19470	19553	45949	45949					0.09464409119482298
VPYVTEVFL	9	Unmodified	_VPYVTEVFL_					0	0	0			REV__ENSG00000138463|ENST00000261038|SLC49A4	REV__ENSG00000138463|ENST00000261038|SLC49A4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1918212771416	2	533.794601	1065.57465	1.4026	0.00074872	-3.1475	-0.0016801	-1.7448	-0.00093139	533.7944549364098	80.086	0.18481	81.803	81.663	81.848	1.7167					8	5	2	0	0	0	0.116	1	33571	33571		5.2307	2.3415	1	641280	+		39616	10066	19471	19554	45950	45950					0.044483953885674055
VPYVTEVFL	9	Unmodified	_VPYVTEVFL_					0	0	0			REV__ENSG00000138463|ENST00000261038|SLC49A4	REV__ENSG00000138463|ENST00000261038|SLC49A4	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	533.794601	1065.57465	2.6929	0.0014375	-2.7604	-0.0014735	-0.067492	-3.6027E-05	533.7937160860289	80.557	0.30424	81.808	81.608	81.912	1.2512	0.0023194	8.1329E-05	NaN	5.2307	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	969330	+		39617	10066	19471	19554							0.044483953885674055
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	957.5686523318291	1	957.561524	956.554247	3.3445	0.0032026	2.1554	0.002064	5.5	0.0052666	957.562965994154	87.06	0.32825	88.151	88.006	88.335	1.0918					16	10	3	0	0	0	0.033504	1	36731	36731		81.89	0	1	1756700	+		39618	13064	19472	19555	45951	45951					0.0742322472875685
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2866699099541	2	479.2844	956.554247	4.2075	0.0020166	-0.037021	-1.7744E-05	4.1705	0.0019989	479.28456607690475	87.103	0.42537	88.195	88.034	88.459	1.0918					19	13	2	0	0	0	0.18809	1	36746	36746		34.402	0	1	1698400	+		39619	13064	19472	19555	45952	45952					0.0742322472875685
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2865783572197	2	479.2844	956.554247	4.3734	0.0020961	-1.3368	-0.00064072	3.0365	0.0014554	479.28422275675143	86.644	0.3793	88.14	87.984	88.364	1.4953					18	12	2	0	0	0	0.18809	1	36550	36550		34.402	0	1	1426400	+		39620	13064	19472	19555	45953	45953					0.0742322472875685
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	479.2844	956.554247	3.4061	0.0016325	-0.31922	-0.000153	3.0869	0.0014795	479.28460175808914	87.903	0.18954	88.138	88.069	88.259	0.23471	-0.019783	0.00034769	NaN	34.402	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	215160	+		39621	13064	19472	19555							0.0742322472875685
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	479.2844	956.554247	4.2075	0.0020166	-0.037021	-1.7744E-05	4.1705	0.0019989	479.28456607690475	87.103	0.42537	88.195	88.034	88.459	1.0918	0.037627	0.00061819	NaN	34.402	19	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1698400	+		39622	13064	19472	19555							0.0742322472875685
VQADLVISI	9	Unmodified	_VQADLVISI_					0	0	0			REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	REV__ENST00000438163.1_1_2:32427889-32428366:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	479.2844	956.554247	4.3734	0.0020961	-1.3368	-0.00064072	3.0365	0.0014554	479.28422275675143	86.644	0.3793	88.14	87.984	88.364	1.4953	-0.017844	-0.00062775	NaN	34.402	18	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1426400	+		39623	13064	19472	19555							0.0742322472875685
VQAHGGGG	8	Unmodified	_VQAHGGGG_					0	0	0		sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1;sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	341.6684448122978	2	341.666995	681.319437	-0.58985	-0.00020153	2.3885	0.00081607	1.7986	0.00061454	341.66861988164084	87.303	0.43474	87.303	87.029	87.463	0					32	17	4	0	0	0	0.89176	1	36475	36475		0.79363	0	1	5883800			39624	15979	19473	19556	45954	45954					-0.03397028236281585
VQAHGGGG	8	Unmodified	_VQAHGGGG_					0	0	0		sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1;sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.6684142947197	2	341.666995	681.319437	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.536	1	86.78	86.28	87.28	0.24387								0	0	0	1.0178	1	36198	36198		0.79363	0	1				39625	15979	19473	19556	45955	45955					-0.03397028236281585
VQAHGGGG	8	Unmodified	_VQAHGGGG_					0	0	0		sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1;sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	341.6691772341728	2	341.666995	681.319437	2.4439	0.00083499	1.1502	0.00039299	3.5941	0.001228	341.66886536309306	86.723	0.78865	87.815	87.452	88.241	1.0918					121	28	6	0	0	0	0.89176	3	36448	36448;36521;36602		0.79363	0	1	11147000			39626	15979	19473	19556	45956;45957;45958	45956					-0.03397028236281585
VQAHGGGG	8	Unmodified	_VQAHGGGG_					0	0	0		sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1;sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	341.6693908572197	2	341.666995	681.319437	3.6641	0.0012519	0.49268	0.00016833	4.1568	0.0014202	341.66827405129703	86.386	0.8171	87.933	87.535	88.352	1.547					104	29	4	0	0	0	0.89176	2	36328	36328;36413		0.79363	0	1	9048400			39627	15979	19473	19556	45959;45960	45959					-0.03397028236281585
VQAHGGGG	8	Unmodified	_VQAHGGGG_					0	0	0		sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1;sp|F5HEN8|HELI_HCMVMDNAreplicationhelicaseOS=Humancytomegalovirus(strainMerlin)OX=295027GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	sp|P16736|HELI_HCMVADNAreplicationhelicaseOS=Humancytomegalovirus(strainAD169)OX=10360GN=HELIPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	341.666995	681.319437	2.127	0.00072673	-1.3995	-0.00047816	0.7275	0.00024856	341.66769823408174	87.055	0.35099	87.298	87.145	87.496	0.24387	-0.0020988	-0.0016563	NaN	0.79363	33	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3602600			39628	15979	19473	19556							-0.03397028236281585
VQATFEVL	8	Unmodified	_VQATFEVL_					0	0	0		ENSG00000068120|ENST00000393818|COASY;nc|ENSG00000068120|Q13057-2|COASY	ENSG00000068120|ENST00000393818|COASY	ENSG00000068120|ENST00000393818|COASY	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	906.4900390505791	1	906.49311	905.485833	1.3692	0.0012412	2.9827	0.0027038	4.3519	0.003945	906.4961259022488	70.4	0.33202	70.723	70.56	70.892	0.32224					15	10	2	0	0	0	0.67986	1	29454	29454		32.305	7.6316	1	1557100			39629	828	19474	19557	45961	45961					0.029309801489034726
VQAVVLLLP	9	Unmodified	_VQAVVLLLP_					0	0	0		ENST00000581856.5_1_18:28923397-28923595:-|nuORF	ENST00000581856.5_1_18:28923397-28923595:-|nuORF	ENST00000581856.5_1_18:28923397-28923595:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	318.1545593142509	3	317.879428	950.616454	-0.28361	-9.0154E-05	0.34451	0.00010951	0.060901	1.9359E-05	317.879904771265	21.08	0.41249	22.205	22.102	22.515	1.1254					21	13	2	0	0	0	0.11954	1	8786	8786		0.26902	0	1	1550700			39630	7438	19475	19558	45962	45962					0.13916995867759852
VQCKIKVQ	8	Unmodified	_VQCKIKVQ_					0	0	0			REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2833434939384	2	473.281137	944.547722	2.2479	0.0010639	0.50373	0.00023841	2.7517	0.0013023	473.2808310275863	66.878	0.50099	66.878	66.671	67.172	0					20	15	2	0	0	0	0.88587	1	27827	27827		5.2307	0	1	1392400	+		39631	8181	19476	19559	45963	45963					0.07323008296407352
VQCKIKVQ	8	Unmodified	_VQCKIKVQ_					0	0	0			REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	473.281137	944.547722	2.2479	0.0010639	0.50373	0.00023841	2.7517	0.0013023	473.2808310275863	66.878	0.50099	66.878	66.671	67.172	0	-0.14739	0.00053745	NaN	5.2307	20	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1392400	+		39632	8181	19476	19559							0.07323008296407352
VQCKIKVQ	8	Unmodified	_VQCKIKVQ_					0	0	0			REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	473.281137	944.547722	2.6248	0.0012423	0.69493	0.0003289	3.3197	0.0015712	473.28124892528194	66.772	0.43878	67.096	66.843	67.282	0.32449	0.071079	0.00071843	NaN	5.2307	24	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1472100	+		39633	8181	19476	19559							0.07323008296407352
VQCKIKVQ	8	Unmodified	_VQCKIKVQ_					0	0	0			REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	REV__ENST00000471314.1_1_9:100116971-100120019:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	473.281137	944.547722	2.6268	0.0012432	-1.3551	-0.00064134	1.2717	0.00060188	473.28027609995746	65.702	0.45935	67.101	66.788	67.247	1.3989	0.076312	-0.0012221	NaN	5.2307	18	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1076000	+		39634	8181	19476	19559							0.07323008296407352
VQCWREEA	8	Unmodified	_VQCWREEA_					0	0	0		ENSG00000123154|ENST00000418543|WDR83	ENSG00000123154|ENST00000418543|WDR83	ENSG00000123154|ENST00000418543|WDR83	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7325317263603	2	510.732009	1019.44946	2.0822	0.0010634	0.86512	0.00044184	2.9473	0.0015053	510.73230298829003	54.164	0.31689	56.132	55.938	56.255	1.9684					17	9	2	0	0	0	0.87935	1	22676	22676		9.3474	0	1	1927400			39635	2181	19477	19560	45964	45964					-0.05948220019456585
VQDFQCRAK	9	Unmodified	_VQDFQCRAK_					0	0	0		nc|ENSG00000165309|Q5W041-5|ARMC3;nc|ENSG00000165309|Q5W041-3|ARMC3;chr10:23008931-23014100|376|20.19|0.93|4.43|+|ENST00000409049|ARMC3,ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3	nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-5|ARMC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.5179015994072	3	365.518564	1093.53386	-1.9448	-0.00071086	-0.65865	-0.00024075	-2.6035	-0.00095161	365.5183798840853	14.427	0.37082	14.427	14.256	14.627	0					33	11	4	0	0	0	0.30098	2	5963	5963;6014		23.79	5.4167	1	6081800			39636	176	19478	19561	45965;45966	45965					-0.009162692027075536
VQDFQCRAK	9	Unmodified	_VQDFQCRAK_					0	0	0		nc|ENSG00000165309|Q5W041-5|ARMC3;nc|ENSG00000165309|Q5W041-3|ARMC3;chr10:23008931-23014100|376|20.19|0.93|4.43|+|ENST00000409049|ARMC3,ARMC3;nc|ENSG00000165309|Q5W041-4|ARMC3;ENSG00000165309|ENST00000298032|ARMC3	nc|ENSG00000165309|Q5W041-5|ARMC3	nc|ENSG00000165309|Q5W041-5|ARMC3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	365.518564	1093.53386	-0.19488	-7.1231E-05	-2.1727	-0.00079417	-2.3676	-0.0008654	365.517858139874	13.766	0.18819	14.594	14.516	14.704	0.82789	0.054853	-0.00089223	NaN	23.79	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	305330			39637	176	19478	19561							-0.009162692027075536
VQDFQRKP	8	Unmodified	_VQDFQRKP_					0	0	0		ENSG00000144815|ENST00000273347|NXPE3	ENSG00000144815|ENST00000273347|NXPE3	ENSG00000144815|ENST00000273347|NXPE3	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.2788879275322	2	509.277441	1016.54033	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.096	1	17.136	16.636	17.636	1.0392								0	0	0	1.0178	1	6680	6680		7.9102	0	1				39638	3095	19479	19562	45967	45967					0.03271992020336256
VQDPQSTYNF	10	Unmodified	_VQDPQSTYNF_					0	0	0			REV__ENST00000483946.1_1_3:113252030-113286558:+|nuORF	REV__ENST00000483946.1_1_3:113252030-113286558:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7740966677666	2	599.772385	1197.53022	2.9871	0.0017916	-0.78251	-0.00046933	2.2046	0.0013223	599.7725506560926	62.848	0.48754	64.262	64.045	64.533	1.4134					61	15	6	0	0	0	0.31869	1	26354	26354		38.176	0.024387	1	15001000	+		39639	8742	19480	19563	45968	45968					-0.060646604955763905
VQDYLEKFYQL	11	Unmodified	_VQDYLEKFYQL_					0	0	0		ENSG00000118113|ENST00000236826|MMP8	ENSG00000118113|ENST00000236826|MMP8	ENSG00000118113|ENST00000236826|MMP8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	723.3707763552666	2	723.369192	1444.72383	1.742	0.0012601	3.5016	0.0025329	5.2436	0.003793	723.8738931853313	37.387	0.25263	37.387	37.266	37.519	0					16	9	2	0	0	0	0.34699	2	15659	15659;15712		28.495	0	1	2064400			39640	2030	19481	19564	45969;45970	45969					0.019258762206618485
VQEKLKVI	8	Unmodified	_VQEKLKVI_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|79|2|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|79|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	956.6159545779228	1	956.613894	955.606617	2.3889	0.0022852	0.86857	0.00083088	3.2574	0.0031161	956.614648608871	109.12	0.24203	109.28	109.13	109.37	0.15898					36	11	4	0	0	0	0.89176	1	47277	47277		0.79363	0	1	107690000	+		39641	14215	19482	19565	45971	45971					0.12703807862385474
VQERLKRHKLR	11	Unmodified	_VQERLKRHKLR_					0	0	0			REV__SARNP-KCNN4|1|fusion	REV__SARNP-KCNN4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	366.4817993044853	4	366.482389	1461.90045	-0.32359	-0.00011859	1.2517	0.00045873	0.92813	0.00034014	366.48247881312255	30.917	0.84622	32.199	31.687	32.534	1.2825					59	26	3	0	0	0	1.0402	1	12981	12981		0.094841	0	1	940050	+		39642	9146	19483	19566	45972	45972					0.18797394684975188
VQEYDRGRK	9	Unmodified	_VQEYDRGRK_					0	0	0			REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8004638552666	2	575.801811	1149.58907	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.03	1	12.119	11.619	12.619	0.089381								0	0	0	0.42693	1	4992	4992		4.756	0	1		+		39643	15476	19484	19567	45973	45973					0.020258605894241555
VQEYFGDCNQ	10	Unmodified	_VQEYFGDCNQ_					0	0	0		ENST00000521895.5_1_8:82627332-82633516:-|nuORF;ENST00000521885.5_1_8:82627332-82644598:-|nuORF	ENST00000521895.5_1_8:82627332-82633516:-|nuORF	ENST00000521895.5_1_8:82627332-82633516:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	601.7452270388603	2	601.74277	1201.47099	0.97238	0.00058512	2.379	0.0014315	3.3513	0.0020166	601.7444505048379	15.545	0.093849	15.545	15.497	15.591	0					4	2	2	0	0	0	0.82659	1	6464	6464		9.3831	1.473	1	283710			39644	7087	19485	19568	45974	45974					-0.12168879781393116
VQEYFGDCNQ	10	Unmodified	_VQEYFGDCNQ_					0	0	0		ENST00000521895.5_1_8:82627332-82633516:-|nuORF;ENST00000521885.5_1_8:82627332-82644598:-|nuORF	ENST00000521895.5_1_8:82627332-82633516:-|nuORF	ENST00000521895.5_1_8:82627332-82633516:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	601.7458984255791	2	601.74277	1201.47099	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.589	1	15.72	15.22	16.22	0.13022								0	0	0	0.65926	1	6469	6469		5.7319	1.4026	1				39645	7087	19485	19568	45975	45975					-0.12168879781393116
VQFAWKHL	8	Unmodified	_VQFAWKHL_					0	0	0		ENSG00000163701|ENST00000383814|IL17RE;nc|ENSG00000163701|Q8NFR9-2|IL17RE;ENST00000454190.6_2_3:9956219-9957488:+|nuORF	ENSG00000163701|ENST00000383814|IL17RE	ENSG00000163701|ENST00000383814|IL17RE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	514.8235961794853	2	514.787444	1027.56034	1.874	0.00096472	4.1909	0.0021574	6.0649	0.0031222	514.7896336921784	42.906	0.16027	44.246	44.17	44.331	1.3399					8	4	2	0	0	0	2.3239	1	17987	17987		19.439	0	1	400010			39646	3715	19486	19569	45976	45976					0.04765787750943673
VQFLEYELN	9	Unmodified	_VQFLEYELN_					0	0	0		ENSG00000084674|ENST00000233242|APOB;APOB|p.R4105Sfs*16|1|0.41|ENSG00000084674|chr2:21003083-21003107|CTCAGCATTGTTCTGCAGATTTCTT/-|frameshift_variant	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.7896606326103	2	577.790047	1153.56554	3.3563	0.0019392	-0.45358	-0.00026207	2.9027	0.0016771	577.7890137620288	86.476	0.25995	87.603	87.487	87.747	1.1265					18	9	2	0	0	0	0.32838	1	36459	36459		24.021	2.2739	1	3117900			39647	1053	19487	19570	45977	45977					-0.0050999796776523
VQFLEYELN	9	Unmodified	_VQFLEYELN_					0	0	0		ENSG00000084674|ENST00000233242|APOB;APOB|p.R4105Sfs*16|1|0.41|ENSG00000084674|chr2:21003083-21003107|CTCAGCATTGTTCTGCAGATTTCTT/-|frameshift_variant	ENSG00000084674|ENST00000233242|APOB	ENSG00000084674|ENST00000233242|APOB	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	577.790047	1153.56554	3.8573	0.0022287	0.029548	1.7073E-05	3.8869	0.0022458	578.291885691686	86.06	0.2342	87.607	87.512	87.746	1.547	0.0021236	0.00038517	NaN	24.021	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2084700			39648	1053	19487	19570							-0.0050999796776523
VQFLRPLEQRR	11	Unmodified	_VQFLRPLEQRR_					0	0	0		KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2845947146416	3	481.284398	1440.83137	3.4154	0.0016438	-2.3285	-0.0011207	1.0869	0.00052312	481.28287493317043	88.925	1.4158	89.149	88.809	90.224	0.22359					101	43	3	0	0	0	1.0365	2	37348	37298;37348		1.2148	0.76031	1	2949300			39649	7665	19488	19571	45978;45979	45979					0.12858310665365025
VQFLRPLEQRR	11	Unmodified	_VQFLRPLEQRR_					0	0	0		KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	KEL|p.F283V|1|0.11|ENSG00000197993|chr7:142954261-142954261|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2862426638603	3	481.284398	1440.83137	5.4031	0.0026004	-1.9513	-0.00093914	3.4518	0.0016613	481.28311030345975	88.282	1.2053	89.338	88.518	89.723	1.0562					102	37	3	0	0	0	1.0365	2	37130	37130;37169		1.2148	0.76031	1	3007300			39650	7665	19488	19571	45980;45981	45980					0.12858310665365025
VQFWKMLIL	9	Unmodified	_VQFWKMLIL_					0	0	0		nc|ENSG00000119392|Q53GS7-2|GLE1;ENSG00000119392|ENST00000309971|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	nc|ENSG00000119392|Q53GS7-2|GLE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3459960818291	2	589.343738	1176.67292	2.5576	0.0015073	-0.6861	-0.00040435	1.8716	0.001103	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.76456	1	31777	31777		4.756	4.756	1	9601000			39651	2066	19489	19572	45982	45982					0.09165300432778167
VQGAGAGV	8	Unmodified	_VQGAGAGV_					0	0	0			REV__nc|ENSG00000167702|Q96AC6|KIFC2	REV__nc|ENSG00000167702|Q96AC6|KIFC2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.3229858279228	2	329.679571	657.344589	-2.4336	-0.00080231	0.45375	0.00014959	-1.9798	-0.00065272	329.6817434940097	105.18	0.10316	105.18	105.09	105.19	0					7	4	2	0	0	0	2.3239	1	44533	44533		0	0	1	3628600	+		39652	14481	19490	19573	45983	45983					0.002210265662938582
VQGGPPQTEL	10	Unmodified	_VQGGPPQTEL_					0	0	0			REV__nc|ENSG00000163534|Q96LA6-3|FCRL1	REV__nc|ENSG00000163534|Q96LA6-3|FCRL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2705566287041	2	513.266739	1024.51892	2.7551	0.0014141	4.1427	0.0021263	6.8978	0.0035404	513.2684941226862	77.871	0.3986	79.152	78.95	79.348	1.2809					20	12	2	0	0	0	0.78468	1	32693	32693		13.906	0.39817	1	1978300	+		39653	10690	19491	19574	45984	45984					0.007645622009476938
VQGRRRVSPL	10	Unmodified	_VQGRRRVSPL_					0	0	0			REV__ENST00000558190.5_1_14:92505726-92506164:-|nuORF	REV__ENST00000558190.5_1_14:92505726-92506164:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3579589724541	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89803	2	31293	31293;31519		1.4819	0.95714	1	7390500	+		39654	13878	19492	19575	45985;45986	45985					0.122941253683166
VQHKAPDIGE	10	Unmodified	_VQHKAPDIGE_					0	0	0			REV__nc|ENSG00000131503|Q8IWZ3-2|ANKHD1	REV__nc|ENSG00000131503|Q8IWZ3-2|ANKHD1	MSMS	GG20161007_CRH_Patient100_A02_02	2	365.1956054568291	3	365.192734	1092.55637	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.233	1	99.313	98.813	99.813	0.080376								0	0	0	0.66151	1	41545	41545		1.9064	0.25375	1		+		39655	14430	19493	19576	45987	45987					0.01379653466574382
VQHKKIKE	8	Unmodified	_VQHKKIKE_					0	0	0		tr|A0A7D6ZUM4|A0A7D6ZUM4_9CLOTDUF2085domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12555PE=4SV=1	tr|A0A7D6ZUM4|A0A7D6ZUM4_9CLOTDUF2085domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12555PE=4SV=1	tr|A0A7D6ZUM4|A0A7D6ZUM4_9CLOTDUF2085domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12555PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	505.3116027712822	2	505.311284	1008.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.944	1	33.768	33.268	34.268	1.8246								0	0	0	1.0178	1	13391	13391		0.69038	0	1				39656	17146	19494	19577	45988	45988					0.10405441951138528
VQHREYIV	8	Unmodified	_VQHREYIV_					0	0	0			REV__ENST00000491592.1_1_2:55200947-55201100:-|nuORF	REV__ENST00000491592.1_1_2:55200947-55201100:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	522.7344848513603	2	522.285266	1042.55598	3.8048	0.0019872	-2.48	-0.0012953	1.3247	0.0006919	522.2845891298152	81.561	0.46414	83.257	83.043	83.508	1.6959					19	14	2	0	0	0	2.3239	1	34238	34238		7.9102	0	1	548550	+		39657	13432	19495	19578	45989	45989					0.036402785373638835
VQIDITRVF	9	Unmodified	_VQIDITRVF_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8169433474541	2	545.816399	1089.61824	2.7509	0.0015015	-0.18701	-0.00010208	2.5639	0.0013994	545.8160204781441	62.5	0.42005	63.913	63.711	64.131	1.4134					36	13	4	0	0	0	0.014947	2	26171	26171;26222		103.42	41.559	1	15178000			39658	753	19496	19579	45990;45991	45990					0.0770200488568662
VQIDITRVF	9	Unmodified	_VQIDITRVF_					0	0	0		ENSG00000061676|ENST00000361354|NCKAP1;nc|ENSG00000061676|Q9Y2A7-2|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	ENSG00000061676|ENST00000361354|NCKAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8178588747978	2	545.816399	1089.61824	2.8646	0.0015635	0.051332	2.8018E-05	2.9159	0.0015916	545.81616980466	61.967	0.37175	63.924	63.719	64.091	1.9571					35	11	4	0	0	0	0.0037498	2	26000	25950;26000		125.53	57.448	1	14480000			39659	753	19496	19579	45992;45993	45993					0.0770200488568662
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	943.5476562380791	1	943.545874	942.538597	1.9429	0.0018332	-0.29369	-0.00027711	1.6492	0.0015561	943.5454582475393	63.633	0.34387	63.633	63.429	63.773	0					24	10	3	0	0	0	0.015029	2	26533	26484;26533		103.35	7.2426	1	2577600			39660	2998	19497	19580	45994;45995	45995					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2779113650322	2	472.276575	942.538597	2.535	0.0011972	-0.17356	-8.1967E-05	2.3614	0.0011152	472.27662451810806	63.571	0.40396	63.571	63.398	63.802	0					24	12	3	0	0	0	0.12251	1	26537	26537		41.84	5.7126	1	2884400			39661	2998	19497	19580	45996	45996					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	943.5471069216728	1	943.545874	942.538597	1.9323	0.0018232	0.41872	0.00039508	2.351	0.0022183	943.5463696532	63.24	0.37705	63.57	63.349	63.726	0.32974					26	11	3	0	0	0	0.0058174	2	26492	26445;26492		118.89	7.6077	1	2771200			39662	2998	19497	19580	45997;45998	45998					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2781860232353	2	472.276575	942.538597	2.639	0.0012463	-0.15195	-7.1764E-05	2.487	0.0011746	472.2765877284187	63.188	0.37591	63.518	63.318	63.694	0.32974					22	11	3	0	0	0	0.057024	1	26452	26452		65.235	6.5562	1	2494800			39663	2998	19497	19580	45999	45999					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.2793456912041	2	472.276575	942.538597	3.0252	0.0014287	-0.024703	-1.1667E-05	3.0005	0.0014171	472.27663054903593	62.123	0.44549	63.541	63.238	63.683	1.4177					30	13	3	0	0	0	0.083604	1	25984	25984		54.774	6.4277	1	5536000			39664	2998	19497	19580	46000	46000					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	943.5483276247978	1	943.545874	942.538597	2.6415	0.0024924	0.0095319	8.9938E-06	2.651	0.0025014	943.5456662748397	62.059	0.41313	63.477	63.27	63.683	1.4177					29	12	3	0	0	0	0.0006934	2	26042	25997;26042		134.3	10.845	1	5931300			39665	2998	19497	19580	46001;46002	46002					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	943.5483276247978	1	943.545874	942.538597	2.5878	0.0024417	-0.46921	-0.00044272	2.1186	0.001999	943.5454855159559	61.557	0.41496	63.514	63.274	63.689	1.9571					28	12	3	0	0	0	0.0069529	3	25831	25788;25831;25877		114.65	7.462	1	6140800			39666	2998	19497	19580	46003;46004;46005	46004					0.0650293821172454
VQIGDIVTV	9	Unmodified	_VQIGDIVTV_					0	0	0		ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	ENSG00000142534|ENST00000270625|RPS11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.2774536013603	2	472.276575	942.538597	2.7288	0.0012888	-0.32408	-0.00015306	2.4047	0.0011357	472.2764986406534	61.614	0.3527	63.572	63.305	63.657	1.9571					22	10	3	0	0	0	0.04145	2	25845	25801;25845		74.929	6.8483	1	3843500			39667	2998	19497	19580	46006;46007	46007					0.0650293821172454
VQISQRWFA	9	Unmodified	_VQISQRWFA_					0	0	0		ENST00000383168.8_2_18:24434304-24434469:-|nuORF	ENST00000383168.8_2_18:24434304-24434469:-|nuORF	ENST00000383168.8_2_18:24434304-24434469:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8106567263603	2	567.806365	1133.59818	3.3075	0.001878	2.2866	0.0012983	5.5941	0.0031764	567.8091216083278	60.397	0.56788	62.362	61.947	62.514	1.9653					34	17	3	0	0	0	0.68551	1	25314	25314		7.9102	0.62092	1	2514100			39668	6240	19498	19581	46008	46008					0.03672253945751436
VQITQLNTLLL	11	Unmodified	_VQITQLNTLLL_					0	0	0			REV__ENST00000469463.1_1_1:186321098-186322975:-|nuORF	REV__ENST00000469463.1_1_1:186321098-186322975:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3846313357353	2	628.384645	1254.75474	2.5225	0.0015851	-1.2975	-0.0008153	1.2251	0.00076981	628.3836269646986	79.065	0.49911	80.332	80.224	80.723	1.2668					32	15	3	0	0	0	0.91768	1	33198	33198		8.7454	1.4562	1	1897500	+		39669	13268	19499	19582	46009	46009					0.1375507432555878
VQKFLGVL	8	Unmodified	_VQKFLGVL_					0	0	0		ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	452.2868835330009	2	452.286746	902.558939	1.1845	0.00053574	-2.3396	-0.0010582	-1.1551	-0.00052242	452.2857623309543	104.55	0.092453	104.55	104.49	104.58	0					11	4	4	0	0	0	0.89051	1	44162	44162		2.3027	0	1	24481000			39670	3750	19500	19583	46010	46010					0.10376153662184606
VQKFLGVL	8	Unmodified	_VQKFLGVL_					0	0	0		ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	ENSG00000164100|ENST00000296499|NDST3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	452.286746	902.558939	3.3628	0.0015209	-3.8135	-0.0017248	-0.45071	-0.00020385	452.2851157998216	104.49	0.092674	104.65	104.58	104.67	0.16055	0.049564	0.00031806	NaN	2.3027	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	34208000			39671	3750	19500	19583							0.10376153662184606
VQKKALWR	8	Unmodified	_VQKKALWR_					0	0	0			REV__tr|A0A7D6VVM4|A0A7D6VVM4_9CLOTPhagemajorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11800PE=4SV=1	REV__tr|A0A7D6VVM4|A0A7D6VVM4_9CLOTPhagemajorcapsidproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11800PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8233520388603	2	514.821818	1027.62908	2.3753	0.0012229	-1.6851	-0.00086753	0.69021	0.00035533	514.8224387128736	43.774	1.4366	45.128	44.825	46.262	1.3536					58	45	2	0	0	0	0.77833	1	18281	18281		23.148	3.8914	1	2563200	+		39672	15531	19501	19584	46011	46011					0.11637452050626962
VQKKLLRK	8	Unmodified	_VQKKLLRK_					0	0	0			REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.9019348025322	3	338.237838	1011.69168	0.37257	0.00012602	-4.3619	-0.0014754	-3.9894	-0.0013494	338.23619005431084	56.741	0.35658	58.71	58.394	58.751	1.9684					14	11	2	0	0	0	2.3239	1	23742	23742		3.5965	0	1	1854100	+		39673	11167	19502	19585	46012	46012					0.18630598118829766
VQKKRKLK	8	Unmodified	_VQKKRKLK_					0	0	0			REV__ENSG00000113387|ENST00000265073|SUB1	REV__ENSG00000113387|ENST00000265073|SUB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	514.3599731326103	2	514.358568	1026.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.25	1	103.41	102.91	103.91	0.16445								0	0	0	1.0178	1	43503	43503		0	0	1		+		39674	8331	19503	19586	46013	46013					0.19030000493103216
VQKKTFTKWV	10	Unmodified	_VQKKTFTKWV_					0	0	0		ENSG00000115306|ENST00000356805|SPTBN1;nc|ENSG00000115306|Q01082-3|SPTBN1;nc|ENSG00000115306|Q01082-2|SPTBN1;ENST00000488902.5_1_X:32235174-33229429:-|nuORF;ENST00000467673.5_1_1:39571193-39720158:+|nuORF;SPTB|p.F682Lfs*37|1|0.38|ENSG00000070182|chr14:64793617-64793617|A/-|frameshift_variant;nc|ENSG00000160460|Q9H254-2|SPTBN4;DMD|p.I1389*|1|0.08|ENSG00000198947|chrX:32411819-32411820|AT/-|frameshift_variant;nc|ENSG00000070182|P11277-3|SPTB;nc|ENSG00000070182|P11277|SPTB;nc|ENSG00000160460|Q9H254-4|SPTBN4;ENSG00000070182|ENST00000644917|SPTB;ENSG00000160460|ENST00000598249|SPTBN4;SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000173898|O15020-2|SPTBN2;ENSG00000173898|ENST00000533211|SPTBN2;SPTBN2|p.G1605Afs*7|1|0.04|ENSG00000173898|chr11:66693226-66693226|C/-|frameshift_variant;SPTBN2|p.R1805Qfs*108|1|0.25|ENSG00000173898|chr11:66691414-66691435|TGGCGTGCCCCGTGCAGGAAGC/-|frameshift_variant;SPTBN2|p.A1813Pfs*107|1|0.29|ENSG00000173898|chr11:66691412-66691412|C/-|frameshift_variant;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC;nc|ENSG00000127603|Q9UPN3|MACF1;ENSG00000127603|ENST00000564288|MACF1;nc|ENSG00000127603|Q9UPN3-4|MACF1;nc|ENSG00000127603|Q9UPN3-3|MACF1;nc|ENSG00000127603|Q9UPN3-2|MACF1;MACF1-CMTM4|1|fusion;MACF1-CMTM4|2|fusion;nc|ENSG00000198947|P11532-4|DMD;nc|ENSG00000198947|P11532-11|DMD;nc|ENSG00000198947|P11532|DMD;ENSG00000198947|ENST00000357033|DMD	ENSG00000115306|ENST00000356805|SPTBN1;SPTBN2|p.A2190Pfs*127|1|0.23|ENSG00000173898|chr11:66687581-66687581|C/-|frameshift_variant;nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000127603|Q9UPN3|MACF1;nc|ENSG00000198947|P11532-4|DMD	nc|ENSG00000127603|Q9UPN3|MACF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2543212771416	3	422.251924	1263.73394	5.6557	0.0023882	4.4269	0.0018693	10.083	0.0042574	422.58780095389494	89.006	0.41905	90.062	89.788	90.207	1.0562					21	12	2	0	0	0	0.8974	1	37498	37498		1.7423	0.14999	1	1414200			39675	2341;1912;4305;4478;5108	19504	19587	46014	46014					0.11262528736551758
VQKRKSSK	8	Unmodified	_VQKRKSSK_					0	0	0			REV__nc|ENSG00000185480|Q9NWS1-5|PARPBP	REV__nc|ENSG00000185480|Q9NWS1-5|PARPBP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.8019286990166	2	480.801083	959.587613	2.4865	0.0011955	-1.2638	-0.00060765	1.2227	0.00058786	480.80054811015805	78.785	1.372	79.095	78.674	80.046	0.30933					109	43	5	0	0	0	0.89181	1	32856	32856		0.6015	0	1	268820000	+		39676	11466	19505	19588	46015	46015					0.10620271291327299
VQKTVKPI	8	Unmodified	_VQKTVKPI_					0	0	0		AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant;AHR|p.Q513Hfs*9|1|0.06|ENSG00000106546|chr7:17339363-17339364|-/TTTACGAAAACGAAATACG|frameshift_variant;AHR|p.S522Yfs*21|1|0.06|ENSG00000106546|chr7:17339390-17339390|C/-|frameshift_variant;ENSG00000106546|ENST00000242057|AHR	AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant	AHR|p.N284Kfs*16|1|0.03|ENSG00000106546|chr7:17334057-17334058|-/AATGATCCTCACCCTGTACAGACCTAAGCTAATG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7992736697197	2	456.797478	911.580402	3.4736	0.0015867	-1.0627	-0.00048542	2.4109	0.0011013	456.7974744159771	109.16	0.33649	109.32	109.15	109.49	0.1548					31	15	3	0	0	0	0.89187	1	47263	47263		0.69038	0	1	47084000			39677	31	19506	19589	46016	46016					0.12107538690884212
VQKTYVGA	8	Unmodified	_VQKTYVGA_					0	0	0			REV__tr|A0A553STT8|A0A553STT8_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05560PE=4SV=1	REV__tr|A0A553STT8|A0A553STT8_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05560PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	433.2432128787041	2	433.242535	864.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.09	1	101.27	100.77	101.77	0.18047								0	0	0	1.0178	1	42537	42537		2.5775	0	1		+		39678	15261	19507	19590	46017	46017					0.032861133517030794
VQKTYVGA	8	Unmodified	_VQKTYVGA_					0	0	0			REV__tr|A0A553STT8|A0A553STT8_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05560PE=4SV=1	REV__tr|A0A553STT8|A0A553STT8_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_05560PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2433959841728	2	433.242535	864.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.05	1	101.26	100.76	101.76	0.20527								0	0	0	1.0178	1	42489	42489		2.5775	0	1		+		39679	15261	19507	19590	46018	46018					0.032861133517030794
VQKYSGGV	8	Unmodified	_VQKYSGGV_					0	0	0		nc|ENSG00000196115|Q6NVV9-3|ADAM5	nc|ENSG00000196115|Q6NVV9-3|ADAM5	nc|ENSG00000196115|Q6NVV9-3|ADAM5	MSMS	GG20161007_CRH_Patient100_A02_01	1	419.2275573611259	2	419.226885	836.439217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.111	1	98.111	97.611	98.611	0								0	0	0	1.0178	1	41021	41021		2.5775	0	1				39680	7959	19508	19591	46019	46019					0.01445540317627092
VQLAAGVP	8	Unmodified	_VQLAAGVP_					0	0	0			REV__ENST00000263095.10_1_19:57702906-57702963:+|nuORF	REV__ENST00000263095.10_1_19:57702906-57702963:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	754.4450561404228	1	754.445766	753.438489	1.8967	0.001431	-3.0771	-0.0023215	-1.1803	-0.00089049	754.4430775807334	65.132	0.5122	65.459	65.162	65.674	0.32689					35	15	3	0	0	0	0.89176	1	27295	27295		0.79363	0	1	4152000	+		39681	12204	19509	19592	46020	46020					0.05190745668562613
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8743469119072	3	342.8758	1025.60557	-1.6732	-0.00057371	-1.1971	-0.00041047	-2.8704	-0.00098418	342.8753197933501	35.57	0.34005	35.57	35.371	35.711	0					47	28	2	0	0	0	0.77025	2	14908	14908;14960		4.5289	0	1	11798000	+		39682	9123	19510	19593	46021;46022	46021					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8752929568291	3	342.8758	1025.60557	-1.6052	-0.00055039	-0.14007	-4.8027E-05	-1.7453	-0.00059842	342.87564392034113	37.206	1.0173	37.206	36.643	37.66	0					116	47	3	0	0	0	0.82114	2	15513	15471;15513		2.4985	0	1	16067000	+		39683	9123	19510	19593	46023;46024	46024					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	342.8754760622978	3	342.8758	1025.60557	0.91475	0.00031365	-1.7373	-0.00059569	-0.82259	-0.00028205	342.8749919624501	34.499	0.43511	34.798	34.542	34.977	0.29922					51	15	5	0	0	0	0.81521	1	14491	14491		2.7352	0.23671	1	10069000	+		39684	9123	19510	19593	46025	46025					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8752929568291	3	342.8758	1025.60557	-0.70206	-0.00024072	-1.1218	-0.00038464	-1.8239	-0.00062536	342.87524809146396	32.825	0.43128	34.103	33.887	34.319	1.2782					50	15	4	0	0	0	0.75101	1	13743	13743		5.2969	0.76802	1	12945000	+		39685	9123	19510	19593	46026	46026					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8746826052666	3	342.8758	1025.60557	-0.77355	-0.00026523	-2.8512	-0.00097761	-3.6247	-0.0012428	342.8748353830219	33.619	0.25541	34.893	34.742	34.997	1.2746					38	24	2	0	0	0	0.69306	1	14098	14098		7.609	7.609	1	21438000	+		39686	9123	19510	19593	46027	46027					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8748351931572	3	342.8758	1025.60557	-0.068838	-2.3603E-05	-1.36	-0.00046631	-1.4288	-0.00048991	342.87526041618617	38.004	1.0264	39.288	38.704	39.731	1.284					93	39	4	0	0	0	0.84531	1	15728	15728		1.1933	0	1	31208000	+		39687	9123	19510	19593	46028	46028					0.09379270221802471
VQLARMLVP	9	Unmodified	_VQLARMLVP_					0	0	0			REV__ENSG00000103932|ENST00000304330|RPAP1	REV__ENSG00000103932|ENST00000304330|RPAP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.8753539919853	3	342.8758	1025.60557	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.244	1	36.519	36.019	37.019	1.2746								0	0	0	0.42693	1	14795	14795		4.897	0	1		+		39688	9123	19510	19593	46029	46029					0.09379270221802471
VQLDQRSLV	9	Unmodified	_VQLDQRSLV_					0	0	0		chr20:419731-420907|105|19.26|0.81|4.56|+|0|RBCK1,None|1;nc|ENSG00000125826|Q9BYM8-3|RBCK1;ENSG00000125826|ENST00000356286|RBCK1	chr20:419731-420907|105|19.26|0.81|4.56|+|0|RBCK1,None|1	chr20:419731-420907|105|19.26|0.81|4.56|+|0|RBCK1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.3048583865166	2	529.303655	1056.59276	0.81426	0.00043099	3.3619	0.0017795	4.1761	0.0022104	529.3054632700628	50.597	0.30253	52.572	52.394	52.697	1.9753					15	9	2	0	0	0	0.20671	1	21210	21210		32.305	3.8186	1	2251500			39689	246	19511	19594	46030	46030					0.0667253036326656
VQLGYSVLS	9	Unmodified	_VQLGYSVLS_					0	0	0		MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant;MDN1|p.N5282Ifs*9|1|0.04|ENSG00000112159|chr6:89652262-89652263|-/GATTTTTCTGCCAACTA|frameshift_variant;MDN1|p.I5359Kfs*8|1|0.1|ENSG00000112159|chr6:89650154-89650155|-/CATAGCT|frameshift_variant;ENSG00000112159|ENST00000369393|MDN1	MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	MDN1|p.E3571Vfs*18|1|0.11|ENSG00000112159|chr6:89690710-89690711|-/AGGGAAGGAGAGTCACTTA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	483.2684203982353	2	483.26875	964.522947	2.6741	0.0012923	-3.1666	-0.0015303	-0.4925	-0.00023801	483.26710281039254	63.191	0.21961	63.521	63.412	63.631	0.32974					9	6	2	0	0	0	0.1388	1	26483	26483		39.95	1.9757	1	769120			39690	1768	19512	19595	46031	46031					0.03926651694678185
VQLKDDKLK	9	Unmodified	_VQLKDDKLK_					0	0	0			REV__ENSG00000165675|ENST00000394363|ENOX2	REV__ENSG00000165675|ENST00000394363|ENOX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	363.2538329958916	3	362.888763	1085.64446	0.18136	6.5812E-05	-3.6323	-0.0013181	-3.451	-0.0012523	362.88598090526494	55.41	0.57107	56.82	56.449	57.02	1.4099					37	19	3	0	0	0	0.11909	1	23097	23097		0.20686	0	1	3900800	+		39691	10791	19513	19596	46032	46032					0.10506274057161136
VQLLPHVKL	9	Unmodified	_VQLLPHVKL_					0	0	0			REV__ENST00000496455.6_1_3:155633889-155633973:+|nuORF	REV__ENST00000496455.6_1_3:155633889-155633973:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	523.2738525271416	2	523.839677	1045.6648	1.5583	0.0008163	0.93235	0.0004884	2.4906	0.0013047	523.8402412578466	48.903	0.15617	50.291	50.231	50.388	1.388					6	4	2	0	0	0	0.11719	1	20481	20481		7.2892	0	1	2180400	+		39692	13467	19514	19597	46033	46033					0.14379489507655308
VQLLWLLLVLL	11	Unmodified	_VQLLWLLLVLL_					0	0	0			REV__ENSG00000124215|ENST00000348616|CDH26	REV__ENSG00000124215|ENST00000348616|CDH26	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9440795779228	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0989	1	9.0989	8.5989	9.5989	0								0	0	0	0.63775	1	3745	3745		0	0	1		+		39693	9640	19515	19598	46034	46034					0.22566893021075884
VQLLWLLLVLL	11	Unmodified	_VQLLWLLLVLL_					0	0	0			REV__ENSG00000124215|ENST00000348616|CDH26	REV__ENSG00000124215|ENST00000348616|CDH26	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9454833865166	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7869	1	9.7869	9.2869	10.287	0								0	0	0	0.63775	1	4030	4030		0	0	1		+		39694	9640	19515	19598	46035	46035					0.22566893021075884
VQLRFCLS	8	Unmodified	_VQLRFCLS_					0	0	0		nc|ENSG00000033800|O75925-3|PIAS1;PIAS1|p.T603Qfs*10|1|0.04|ENSG00000033800|chr15:68187684-68187685|-/TCAGTTTATA|frameshift_variant;ENSG00000033800|ENST00000249636|PIAS1;nc|ENSG00000033800|O75925-2|PIAS1;PIAS1|p.Y283Ifs*3|1|0.1|ENSG00000033800|chr15:68153607-68153607|A/-|frameshift_variant;PIAS1|p.Y283Cfs*16|1|0.08|ENSG00000033800|chr15:68153609-68153621|ATCTTGTAAAACA/-|frameshift_variant	nc|ENSG00000033800|O75925-3|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	483.2681457400322	2	483.265487	964.516422	2.9592	0.0014301	3.1236	0.0015095	6.0828	0.0029396	483.2668119758238	62.049	0.31871	63.466	63.333	63.652	1.4177					14	9	2	0	0	0	0.52405	1	26036	26036		46.021	46.021	1	1171500			39695	641	19516	19599	46036	46036					0.032744352623012674
VQLRFCLS	8	Unmodified	_VQLRFCLS_					0	0	0		nc|ENSG00000033800|O75925-3|PIAS1;PIAS1|p.T603Qfs*10|1|0.04|ENSG00000033800|chr15:68187684-68187685|-/TCAGTTTATA|frameshift_variant;ENSG00000033800|ENST00000249636|PIAS1;nc|ENSG00000033800|O75925-2|PIAS1;PIAS1|p.Y283Ifs*3|1|0.1|ENSG00000033800|chr15:68153607-68153607|A/-|frameshift_variant;PIAS1|p.Y283Cfs*16|1|0.08|ENSG00000033800|chr15:68153609-68153621|ATCTTGTAAAACA/-|frameshift_variant	nc|ENSG00000033800|O75925-3|PIAS1	nc|ENSG00000033800|O75925-3|PIAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	483.2686340212822	2	483.265487	964.516422	2.2683	0.0010962	3.9842	0.0019254	6.2524	0.0030216	483.26736186279356	61.557	0.28891	63.514	63.368	63.657	1.9571					14	8	2	0	0	0	0.43377	1	25838	25838		52.268	1.4133	1	1329000			39696	641	19516	19599	46037	46037					0.032744352623012674
VQLRRQLQQEK	11	Unmodified	_VQLRRQLQQEK_					0	0	0		ENST00000521308.5_1_5:150563000-150603580:-|nuORF;ENSG00000198624|ENST00000355417|CCDC69	ENST00000521308.5_1_5:150563000-150603580:-|nuORF	ENST00000521308.5_1_5:150563000-150603580:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	713.4200927615166	2	713.417874	1424.82119	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.876	1	38.181	37.681	38.681	0.30497								0	0	0	0.63775	1	15931	15931		3.2813	0.28607	1				39697	5061	19517	19600	46038	46038					0.12577702940143354
VQLSLTLAAL	10	Unmodified	_VQLSLTLAAL_					0	0	0		ENSG00000186480|ENST00000340368|INSIG1;ENST00000468307.1_1_7:155093355-155094128:+|nuORF	ENSG00000186480|ENST00000340368|INSIG1	ENSG00000186480|ENST00000340368|INSIG1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8226806521416	2	514.82115	1027.62775	1.9649	0.0010116	0.9141	0.0004706	2.879	0.0014822	514.8217326997595	42.69	0.81223	44.03	43.764	44.576	1.3399					96	25	6	0	0	0	0.70618	1	18033	18033		18.146	0.011366	1	176560000			39698	4794	19518	19601	46039	46039					0.1150377317121638
VQLVGAAP	8	Unmodified	_VQLVGAAP_					0	0	0			REV__nc|nan|Q8N9H9-2|C1orf127	REV__nc|nan|Q8N9H9-2|C1orf127	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7256042361259	2	377.726521	753.438489	-0.34093	-0.00012878	-1.4922	-0.00056364	-1.8331	-0.00069242	377.725753156684	65.238	0.53604	65.238	64.946	65.482	0					45	16	4	0	0	0	0.89176	1	27132	27132		0.79363	0	1	10996000	+		39699	11149	19519	19602	46040	46040					0.05190745668562613
VQMFPQFTLL	10	Unmodified	_VQMFPQFTLL_					0	0	0			REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF	REV__ENST00000498289.5_1_1:169773308-169819597:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	612.2716552615166	2	612.328285	1222.64202	2.2479	0.0013765	-2.4626	-0.0015079	-0.2147	-0.00013146	612.3264918799366	72.265	0.3108	73.595	73.391	73.702	1.3297					15	9	2	0	0	0	0.12493	1	30286	30286		6.7232	0	1	730330	+		39700	8476	19520	19603	46041	46041					0.03960102327869208
VQMFYEEL	8	Unmodified	_VQMFYEEL_					0	0	0			REV__ENST00000466472.1_1_21:44185493-44188444:+|nuORF	REV__ENST00000466472.1_1_21:44185493-44188444:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7466918826103	2	529.746793	1057.47903	2.8467	0.001508	-3.0679	-0.0016252	-0.22116	-0.00011716	529.7451047924195	73.388	0.40325	75.184	74.974	75.377	1.7962					32	12	4	0	0	0	0.76103	1	30800	30800		24.674	0	1	3128700	+		39701	13240	19521	19604	46042	46042					-0.047407007939682444
VQMTVTDLL	9	Unmodified	_VQMTVTDLL_					0	0	0			REV__ENSG00000181789|ENST00000314797|COPG1	REV__ENSG00000181789|ENST00000314797|COPG1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	509.8047057986259	2	510.275718	1018.53688	1.9076	0.0009734	0.046719	2.384E-05	1.9543	0.00099724	510.27556821486877	67.539	0.24982	69.409	69.299	69.549	1.87					13	7	2	0	0	0	0.11719	1	28335	28335		7.2892	0	1	356880	+		39702	11332	19522	19605	46043	46043					0.028355611314509588
VQPDCCDGDDF	11	Unmodified	_VQPDCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2131225466728	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.194	1	92.176	91.676	92.676	0.98157								0	0	0	0.63775	1	38410	38410		1.4819	0.8804	1		+		39703	9469	19523	19606	46044	46044					-0.19136822649716123
VQPDCCDGDDF	11	Unmodified	_VQPDCCDGDDF_					0	0	0			REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	REV__nc|ENSG00000116183|Q9BXP8-2|PAPPA2	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2109252810478	2	607.210446	1212.40634	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.251	1	93.187	92.687	93.687	0.93623								0	0	0	0.63775	1	38851	38851		1.4819	0.15237	1		+		39704	9469	19523	19606	46045	46045					-0.19136822649716123
VQPGLYLGVA	10	Unmodified	_VQPGLYLGVA_					0	0	0			REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1016.584948718548	1	1016.57751	1015.57023	1.7402	0.0017691	1.1448	0.0011638	2.8851	0.0029329	1016.57959610568	72.73	0.28432	72.73	72.588	72.872	0					14	8	2	0	0	0	0.44465	1	30276	30276		30.637	3.7529	1	1003000	+		39705	13957	19524	19607	46046	46046					0.06306930965649826
VQPGLYLGVA	10	Unmodified	_VQPGLYLGVA_					0	0	0			REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1016.577441394329	1	1016.57751	1015.57023	2.214	0.0022507	-0.15141	-0.00015392	2.0626	0.0020968	1016.5794526750292	72.247	0.28519	72.572	72.42	72.705	0.32494					11	8	2	0	0	0	0.57775	1	30261	30261		24.021	7.0783	1	1015200	+		39706	13957	19524	19607	46047	46047					0.06306930965649826
VQPGLYLGVA	10	Unmodified	_VQPGLYLGVA_					0	0	0			REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	REV__ENST00000569593.1_1_1:175290175-175299610:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1016.576525866985	1	1016.57751	1015.57023	1.102	0.0011202	-0.14652	-0.00014895	0.95543	0.00097127	1016.5779773166884	70.649	0.3031	72.487	72.319	72.622	1.8378					13	9	2	0	0	0	0.11481	1	29634	29634		61.357	0	1	2353200	+		39707	13957	19524	19607	46048	46048					0.06306930965649826
VQPNEAVYTK	10	Unmodified	_VQPNEAVYTK_					0	0	0		ENST00000490651.1_1_X:153760401-153761015:-|nuORF;ENSG00000160211|ENST00000393562|G6PD;nc|ENSG00000160211|P11413-3|G6PD;nc|ENSG00000160211|P11413-2|G6PD	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8004638552666	2	574.800946	1147.58734	0.065715	3.7773E-05	0.87166	0.00050103	0.93737	0.0005388	574.801691599057	14.744	0.14824	15.513	15.432	15.58	0.76937					6	4	2	0	0	0	0.78738	1	6136	6136		13.615	2.8154	1	321600			39708	3548	19525	19608	46049	46049					0.019448067808070846
VQPNEAVYTK	10	Unmodified	_VQPNEAVYTK_					0	0	0		ENST00000490651.1_1_X:153760401-153761015:-|nuORF;ENSG00000160211|ENST00000393562|G6PD;nc|ENSG00000160211|P11413-3|G6PD;nc|ENSG00000160211|P11413-2|G6PD	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	ENST00000490651.1_1_X:153760401-153761015:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	574.800946	1147.58734	0.22046	0.00012672	0.65163	0.00037456	0.8721	0.00050128	574.8021625370161	14.695	0.14881	15.591	15.502	15.651	0.89664	0.039077	-0.00010555	NaN	13.615	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	494330			39709	3548	19525	19608							0.019448067808070846
VQPPHLFLW	9	Unmodified	_VQPPHLFLW_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8175536990166	2	568.816202	1135.61785	3.557	0.0020233	-1.1448	-0.00065118	2.4122	0.0013721	568.8151674383788	73.886	0.75336	75.204	74.685	75.438	1.318					66	23	4	0	0	0	0.069258	3	30994	30994;31045;31092		60.39	31.903	1	9065800			39710	4321	19526	19609	46050;46051;46052	46050					0.055466299565068766
VQPPHLFLW	9	Unmodified	_VQPPHLFLW_					0	0	0		ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	ENSG00000174206|ENST00000398055|KICS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8174926638603	2	568.816202	1135.61785	2.6771	0.0015228	0.056712	3.2259E-05	2.7338	0.001555	568.8158493056856	73.382	0.94286	75.179	74.466	75.409	1.7962					70	29	4	0	0	0	0.087207	3	30772	30722;30772;30822		53.576	32.704	1	8598600			39711	4321	19526	19609	46053;46054;46055	46054					0.055466299565068766
VQPPSLPLL	9	Unmodified	_VQPPSLPLL_					0	0	0		ENST00000555132.5_1_14:90863524-90864799:+|nuORF	ENST00000555132.5_1_14:90863524-90864799:+|nuORF	ENST00000555132.5_1_14:90863524-90864799:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2976867556572	2	482.29731	962.580068	2.8232	0.0013616	-0.65544	-0.00031612	2.1677	0.0010455	482.2969023412263	75.345	0.74324	76.651	76.15	76.894	1.3063					58	23	3	0	0	0	0.044893	1	31580	31580		71.922	3.8416	1	2867800			39712	7294	19527	19610	46056	46056					0.097281189710543
VQPRNWLLF	9	Unmodified	_VQPRNWLLF_					0	0	0		ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.8334838747978	2	586.832383	1171.65021	2.1883	0.0012842	-0.72567	-0.00042585	1.4627	0.00085834	586.832312903012	68.592	0.68767	69.958	69.662	70.35	1.3657					85	21	5	0	0	0	0.045797	5	28834	28701;28745;28795;28834;28882		71.134	29.039	1	31380000			39713	749	19528	19611	46057;46058;46059;46060;46061	46060					0.07125417359520725
VQPRNWLLF	9	Unmodified	_VQPRNWLLF_					0	0	0		ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.8335449099541	2	586.832383	1171.65021	2.2237	0.0013049	-0.68838	-0.00040396	1.5353	0.00090097	586.8323247899473	67.987	0.68533	69.857	69.549	70.234	1.87					87	21	6	0	0	0	0.045797	4	28534	28439;28483;28534;28573		71.134	31.176	1	33491000			39714	749	19528	19611	46062;46063;46064;46065	46064					0.07125417359520725
VQPRNWLLFA	10	Unmodified	_VQPRNWLLFA_					0	0	0		ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3525878787041	2	622.35094	1242.68733	1.6212	0.0010089	0.78846	0.0004907	2.4096	0.0014996	622.3514965970537	67.662	0.63968	69.04	68.724	69.364	1.3778					51	20	3	0	0	0	0.091617	4	28379	28335;28379;28423;28479		78.149	49.068	1	16086000			39715	749	19529	19612	46066;46067;46068;46069	46067					0.07569088905279386
VQPRNWLLFA	10	Unmodified	_VQPRNWLLFA_					0	0	0		ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	ENSG00000060762|ENST00000360961|MPC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3518554568291	2	622.35094	1242.68733	0.75672	0.00047094	1.3639	0.00084881	2.1206	0.0013198	622.3518742917455	67.145	0.52409	69.034	68.733	69.257	1.8889					42	16	3	0	0	0	0.19554	3	28108	28108;28159;28216		58.679	39.422	1	18253000			39716	749	19529	19612	46070;46071;46072	46070					0.07569088905279386
VQPSKYHFL	9	Unmodified	_VQPSKYHFL_					0	0	0		ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	373.5374938845634	3	373.537953	1117.59203	0.33788	0.00012621	-1.4395	-0.00053772	-1.1016	-0.00041151	373.53750156973996	25.676	0.33818	27.393	27.245	27.584	1.7167					26	10	3	0	0	0	0.54255	1	10749	10749		13.615	3.2996	1	2207000			39717	4443	19530	19613	46073	46073					0.03793735714225477
VQPSKYHFL	9	Unmodified	_VQPSKYHFL_					0	0	0		ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	ENSG00000177383|ENST00000317897|MAGEF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	373.537953	1117.59203	0.32539	0.00012154	0.27708	0.0001035	0.60247	0.00022504	373.5379889908883	26.147	0.34417	27.419	27.247	27.591	1.2715	0.012861	0.00094877	NaN	13.615	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2634500			39718	4443	19530	19613							0.03793735714225477
VQPSLFYHL	9	Unmodified	_VQPSLFYHL_					0	0	0		MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant;nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6	MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant	MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2970458865166	2	552.297842	1102.58113	0.098653	5.4486E-05	-0.20508	-0.00011326	-0.10643	-5.8779E-05	552.2981631546816	56.174	0.3033	57.584	57.445	57.748	1.4099					17	11	2	0	0	0	0.078975	1	23573	23573		56.541	24.236	1	3194500			39719	3005	19531	19614	46074	46074					0.03394333339952027
VQPSLFYHL	9	Unmodified	_VQPSLFYHL_					0	0	0		MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant;nc|ENSG00000142733|O95382-3|MAP3K6;ENSG00000142733|ENST00000357582|MAP3K6	MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant	MAP3K6|p.P340Lfs*6|1|0.07|ENSG00000142733|chr1:27362974-27362975|-/A|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	552.297842	1102.58113	0.51002	0.00028169	-0.83954	-0.00046368	-0.32952	-0.00018199	552.297450684523	55.623	0.31638	57.591	57.432	57.749	1.9684	0.0033285	-0.00023908	NaN	56.541	23	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3992200			39720	3005	19531	19614							0.03394333339952027
VQQHEQFIW	9	Unmodified	_VQQHEQFIW_					0	0	0		ENST00000601728.1_1_19:23310047-23310578:-|nuORF	ENST00000601728.1_1_19:23310047-23310578:-|nuORF	ENST00000601728.1_1_19:23310047-23310578:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	607.2120239138603	2	607.80128	1213.58801	2.4989	0.0015188	-1.1708	-0.00071164	1.3281	0.0008072	607.8009057222001	88.178	0.15533	88.413	88.322	88.477	0.2347					6	4	2	0	0	0	0.11946	1	36946	36946		0.6015	0	1	169380			39721	7544	19532	19615	46075	46075					-0.010243537794849544
VQQRLLTKEV	10	Unmodified	_VQQRLLTKEV_					0	0	0			REV__nc|ENSG00000136869|O00206-3|TLR4	REV__nc|ENSG00000136869|O00206-3|TLR4	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3702270388603	2	607.366787	1212.71902	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.965	1	89.021	88.521	89.521	1.0562								0	0	0	0.66031	1	37095	37095		3.9444	0	1		+		39722	9997	19533	19616	46076	46076					0.12117036868539799
VQQTIHWLF	9	Unmodified	_VQQTIHWLF_					0	0	0		ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3;ENST00000535479.5_1_12:7086310-7087113:-|nuORF	ENSG00000111684|ENST00000261407|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3178588747978	2	586.316566	1170.61858	1.8195	0.0010668	0.0067779	3.974E-06	1.8263	0.0010708	586.3170703744635	66.784	0.71812	68.172	67.689	68.407	1.3888					59	22	4	0	0	0	0.30098	2	28023	28023;28078		25.399	8.457	1	1715900			39723	1750	19534	19617	46077;46078	46077					0.04009424605555978
VQQTIHWLF	9	Unmodified	_VQQTIHWLF_					0	0	0		ENSG00000111684|ENST00000261407|LPCAT3;nc|ENSG00000111684|Q6P1A2-2|LPCAT3;ENST00000535479.5_1_12:7086310-7087113:-|nuORF	ENSG00000111684|ENST00000261407|LPCAT3	ENSG00000111684|ENST00000261407|LPCAT3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	586.316566	1170.61858	1.6669	0.00097736	-0.29337	-0.00017201	1.3736	0.00080535	586.3171822042378	66.307	0.65689	68.196	67.747	68.404	1.8889	0.011902	-0.00019482	NaN	25.399	54	20	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1645100			39724	1750	19534	19617							0.04009424605555978
VQRENAKKV	9	Unmodified	_VQRENAKKV_					0	0	0		nc|ENSG00000095951|P15822-2|HIVEP1;nc|ENSG00000095951|P15822-3|HIVEP1;ENSG00000095951|ENST00000379388|HIVEP1	nc|ENSG00000095951|P15822-2|HIVEP1	nc|ENSG00000095951|P15822-2|HIVEP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.7308227419853	2	536.317097	1070.61964	2.5871	0.0013875	-1.537	-0.00082434	1.0501	0.00056319	536.3157745617772	77.857	0.36951	79.138	78.95	79.319	1.2809					22	11	3	0	0	0	0.11645	1	32730	32730		0.52476	0	1	1161900			39725	1191	19535	19618	46079	46079					0.08715638974467765
VQRTTVHF	8	Unmodified	_VQRTTVHF_					0	0	0			REV__ENST00000357375.4_1_19:51914355-51919928:-|nuORF	REV__ENST00000357375.4_1_19:51914355-51919928:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	494.2733337283134	2	494.272158	986.529764	1.1056	0.00054647	0.20665	0.00010214	1.3123	0.00064861	494.2717697739203	97.584	0.18319	97.584	97.507	97.69	0					6	5	2	0	0	0	2.3239	1	40810	40810		4.3292	2.0265	1	634130	+		39726	12562	19536	19619	46080	46080					0.03596009365901409
VQSKALTP	8	Unmodified	_VQSKALTP_					0	0	0			REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	843.4977905154228	1	843.493444	842.486168	2.9246	0.0024669	-0.31923	-0.00026926	2.6054	0.0021977	843.4938537485971	107.66	0.12817	107.82	107.73	107.86	0.15781					11	6	2	0	0	0	0.89178	1	46392	46392		0.69038	0	1	28060000	+		39727	9677	19537	19620	46081	46081					0.05862399868738066
VQSKALTP	8	Unmodified	_VQSKALTP_					0	0	0			REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	843.493444	842.486168	2.9246	0.0024669	-0.31923	-0.00026926	2.6054	0.0021977	843.4938537485971	107.66	0.12817	107.82	107.73	107.86	0.15781	0.0025673	0.00018504	NaN	0.69038	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28060000	+		39728	9677	19537	19620							0.05862399868738066
VQSKALTP	8	Unmodified	_VQSKALTP_					0	0	0			REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	REV__SYMPK|p.I588Mfs*65|1|0.12|ENSG00000125755|chr19:45829191-45829192|-/TGTGTACACACTGCAGGCAGACTCAGGC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	843.493444	842.486168	3.0417	0.0025657	-0.67367	-0.00056824	2.368	0.0019974	843.4934145276212	107.65	0.14441	107.81	107.72	107.86	0.15796	-0.0025673	-0.00011393	NaN	0.69038	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16267000	+		39729	9677	19537	19620							0.05862399868738066
VQSLLATLAL	10	Unmodified	_VQSLLATLAL_					0	0	0			REV__ENST00000485560.5_3_10:38146171-38146261:-|nuORF	REV__ENST00000485560.5_3_10:38146171-38146261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.8228027224541	2	514.82115	1027.62775	1.9592	0.0010086	0.36118	0.00018594	2.3204	0.0011946	514.8214576077853	42.104	0.71368	44.026	43.795	44.509	1.9211					75	22	5	0	0	0	0.77604	1	17751	17751		14.838	0	1	217960000	+		39730	13391	19538	19621	46082	46082					0.1150377317121638
VQSRGLLCH	9	Unmodified	_VQSRGLLCH_					0	0	0			REV__ENST00000257570.9_1_12:121458172-121458310:-|nuORF	REV__ENST00000257570.9_1_12:121458172-121458310:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	505.9344665408134	2	506.771468	1011.52838	0.19118	9.6883E-05	2.1048	0.0010667	2.296	0.0011635	506.772659480735	13.048	0.46964	13.774	13.663	14.133	0.72639					23	14	2	0	0	0	0.11611	1	5396	5396		10.074	1.4806	1	631760	+		39731	12170	19539	19622	46083	46083					0.023080520054804765
VQTKYLTSFYQ	11	Unmodified	_VQTKYLTSFYQ_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	689.3555175662041	2	689.356085	1376.69762	1.6148	0.0011132	-2.608	-0.0017979	-0.99321	-0.00068467	689.3547526749874	63.049	0.33835	64.993	64.814	65.152	1.9444					25	10	3	0	0	0	0.34699	1	26434	26434		28.495	10.121	1	2517600	+		39732	8697	19540	19623	46084	46084					0.024336070491926876
VQTKYLTSFYQ	11	Unmodified	_VQTKYLTSFYQ_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	689.356085	1376.69762	1.8516	0.0012764	-3.2095	-0.0022125	-1.3579	-0.00093605	689.3543225493605	64.612	0.25168	64.939	64.786	65.038	0.32689	-0.029613	-0.00050605	NaN	28.495	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	675700	+		39733	8697	19540	19623							0.024336070491926876
VQTVEEEALI	10	Unmodified	_VQTVEEEALI_					0	0	0		ENST00000504208.5_1_5:136964069-137033992:-|nuORF;nc|ENSG00000146021|Q9UH77-3|KLHL3;nc|ENSG00000146021|Q9UH77-2|KLHL3;ENSG00000146021|ENST00000309755|KLHL3	ENST00000504208.5_1_5:136964069-137033992:-|nuORF	ENST00000504208.5_1_5:136964069-137033992:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8041259646416	2	565.800611	1129.58667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.591	1	51.568	51.068	52.068	1.9772								0	0	0	0.64559	1	20772	20772		18.146	0.011366	1				39734	3132	19541	19624	46085	46085					0.027059673410803953
VQVEYKGETK	10	Unmodified	_VQVEYKGETK_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;HSPA8|p.A182Pfs*14|1|0.3|ENSG00000109971|chr11:123060136-123060137|-/TTTCTGGTGGAAACTACGAATGGTTTTGG|frameshift_variant;HSPA8|p.A182Vfs*18|1|0.31|ENSG00000109971|chr11:123060135-123060136|-/A|frameshift_variant;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	ENSG00000109971|ENST00000534624|HSPA8;HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2112609744072	3	394.211794	1179.61355	-0.77554	-0.00030573	0.79222	0.0003123	0.016686	6.5779E-06	394.212037371771	12.238	0.12742	12.932	12.852	12.98	0.69396					6	3	2	0	0	0	0.1773	1	5093	5093		51.765	33.044	1	1424700			39735	1687;7651	19542	19625	46086	46086					0.03093075952278923
VQVEYKGETK	10	Unmodified	_VQVEYKGETK_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8;nc|ENSG00000109971|P11142-2|HSPA8;ENSG00000126803|ENST00000247207|HSPA2;ENST00000419827.2_1_7:10491071-10492091:+|nuORF;HSPA8|p.D333Gfs*25|1|0.46|ENSG00000109971|chr11:123059585-123059595|CAGGACAATAT/-|frameshift_variant;ENST00000527983.5_1_11:122930124-122932032:-|nuORF;HSPA8|p.A182Pfs*14|1|0.3|ENSG00000109971|chr11:123060136-123060137|-/TTTCTGGTGGAAACTACGAATGGTTTTGG|frameshift_variant;HSPA8|p.A182Vfs*18|1|0.31|ENSG00000109971|chr11:123060135-123060136|-/A|frameshift_variant;ENST00000532780.5_1_11:122930757-122933127:-|nuORF;HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	ENSG00000109971|ENST00000534624|HSPA8;HSPA2|p.L203Afs*12|1|0.08|ENSG00000126803|chr14:64541454-64541455|-/TG|frameshift_variant	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2117797732353	3	394.211794	1179.61355	-0.085938	-3.3878E-05	-0.21384	-8.43E-05	-0.29978	-0.00011818	394.21171237423465	12.073	0.12775	12.86	12.781	12.908	0.78751					9	3	3	0	0	0	0.24485	1	5019	5019		43.477	22.896	1	1676800			39736	1687;7651	19542	19625	46087	46087					0.03093075952278923
VQVHKELIL	9	Unmodified	_VQVHKELIL_					0	0	0			REV__ENST00000426871.1_1_1:151262664-151263682:+|nuORF	REV__ENST00000426871.1_1_1:151262664-151263682:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8341552615166	2	539.834591	1077.65463	1.7724	0.0009568	-2.1582	-0.001165	-0.38577	-0.00020825	539.8332885793919	78.457	0.53171	78.766	78.516	79.047	0.30933					39	16	3	0	0	0	0.83213	1	32859	32859		2.0598	0	1	1369800	+		39737	10206	19543	19626	46088	46088					0.11890881782437646
VQVHLLQPP	9	Unmodified	_VQVHLLQPP_					0	0	0		ZNF423|p.H156Qfs*22|1|0.24|ENSG00000102935|chr16:49638671-49638684|TGTGGATCTGCTCG/-|frameshift_variant	ZNF423|p.H156Qfs*22|1|0.24|ENSG00000102935|chr16:49638671-49638684|TGTGGATCTGCTCG/-|frameshift_variant	ZNF423|p.H156Qfs*22|1|0.24|ENSG00000102935|chr16:49638671-49638684|TGTGGATCTGCTCG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2079345583916	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.262	1	94.134	93.634	94.634	0.87176								0	0	0	0.42693	1	39253	39253		0.96228	0	1				39738	17363	19544	19627	46089	46089					0.08350039576839663
VQVIEALEKY	10	Unmodified	_VQVIEALEKY_					0	0	0		tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	tr|A0A553SJF8|A0A553SJF8_NIACICysteinedesulfuraseOS=NialliacirculansOX=1397GN=CEQ21_16710PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	595.5850097537041	2	596.334621	1190.65469	2.6432	0.0015762	2.1036	0.0012545	4.7468	0.0028307	596.3356249458938	107.52	0.11874	107.57	107.46	107.58	0.052452					9	5	2	0	0	0	0.12557	1	46002	46002		1.3295	0	1	9268000			39739	16247	19545	19628	46090	46090					0.06698836991768076
VQVKLLTK	8	Unmodified	_VQVKLLTK_					0	0	0			REV__nc|ENSG00000189266|Q9NPJ4-2|PNRC2	REV__nc|ENSG00000189266|Q9NPJ4-2|PNRC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.8142272830009	2	464.813128	927.611703	3.3609	0.0015622	-0.49352	-0.00022939	2.8674	0.0013328	464.8128314377744	106.13	0.19749	106.29	106.19	106.39	0.15781					39	10	5	0	0	0	0.89178	1	45419	45419		0.69038	0	1	1149300000	+		39740	11608	19546	19629	46091	46091					0.1450011172497625
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8988525271416	2	663.896243	1325.77793	2.1065	0.0013985	0.079551	5.2814E-05	2.1861	0.0014513	663.8962104692251	80.085	0.74905	80.085	79.887	80.636	0					42	23	2	0	0	0	1.037	2	33360	33360;33464		1.0715	0	1	1092100	+		39741	9630	19547	19630	46092;46093	46092					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8972656130791	2	663.896243	1325.77793	2.2498	0.0014936	-1.8431	-0.0012236	0.40675	0.00027004	663.8951592135703	81.369	1.3111	81.369	80.604	81.915	0					108	42	3	0	0	0	1.037	1	34108	34108		1.0715	0.10919	1	2804200	+		39742	9630	19547	19630	46094	46094					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8968994021416	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0174	1	34831	34831		2.7352	0.23671	1	6935600	+		39743	9630	19547	19630	46095	46095					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8957397341728	2	663.896243	1325.77793	1.9365	0.0012856	-0.5922	-0.00039316	1.3443	0.00089244	663.8956032949152	81.132	1.7839	81.422	80.623	82.407	0.29056					129	57	3	0	0	0	1.037	1	34082	34082		1.0715	0.10919	1	3097800	+		39744	9630	19547	19630	46096	46096					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	663.8970825076103	2	663.896243	1325.77793	2.3028	0.0015288	-0.35089	-0.00023295	1.952	0.0012959	663.895748613258	83.379	1.9711	83.649	83.306	85.277	0.27029					162	62	4	0	0	0	1.0174	2	34892	34801;34892		2.7352	1.2533	1	5935800	+		39745	9630	19547	19630	46097;46098	46098					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8966552615166	2	663.896243	1325.77793	2.4525	0.0016282	-0.076299	-5.0654E-05	2.3762	0.0015776	663.895955838561	80.436	1.3194	81.688	80.769	82.088	1.2512					99	42	3	0	0	0	1.037	1	33600	33600		1.0715	0.10919	1	2397800	+		39746	9630	19547	19630	46099	46099					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.8981811404228	2	663.896243	1325.77793	3.1315	0.002079	0.016293	1.0817E-05	3.1478	0.0020898	663.8958799829188	82.633	1.9072	83.845	82.822	84.729	1.2125					141	60	4	0	0	0	1.0174	2	34675	34675;34781		2.7352	1.2533	1	4734100	+		39747	9630	19547	19630	46100;46101	46100					0.12807513162897521
VQVLKRDLEAR	11	Unmodified	_VQVLKRDLEAR_					0	0	0			REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	REV__nc|ENSG00000124074|Q9H0I2-2|ENKD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.8950073122978	2	663.896243	1325.77793	3.0629	0.0020334	-0.17079	-0.00011339	2.8921	0.00192	663.8958450340799	82.218	1.9952	83.888	83.11	85.106	1.67					130	63	4	0	0	0	1.0174	4	34259	34259;34464;34618;34905		2.7352	1.5419	1	4887400	+		39748	9630	19547	19630	46102;46103;46104;46105	46102					0.12807513162897521
VQVLRRTPRT	10	Unmodified	_VQVLRRTPRT_					0	0	0		nc|ENSG00000121440|Q9UPQ7-3|PDZRN3;ENSG00000121440|ENST00000263666|PDZRN3	nc|ENSG00000121440|Q9UPQ7-3|PDZRN3	nc|ENSG00000121440|Q9UPQ7-3|PDZRN3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	613.3798095583916	2	613.37802	1224.74149	1.7542	0.001076	-0.23616	-0.00014485	1.5181	0.00093115	613.3776453540108	97.627	0.12242	97.627	97.537	97.66	0					6	3	2	0	0	0	0.89803	1	40820	40820		0.40072	0	1	1342600			39749	2134	19548	19631	46106	46106					0.13810681056816065
VQVREKLKHA	10	Unmodified	_VQVREKLKHA_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3675414919853	2	604.367121	1206.71969	2.556	0.0015448	-2.0625	-0.0012465	0.49346	0.00029823	604.3655960912371	92.379	0.52594	92.548	92.249	92.775	0.16835					60	16	5	0	0	0	0.89803	1	38659	38659		0.40072	0	1	15137000			39750	1841	19549	19632	46107	46107					0.12459876308275852
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8574096560478	2	597.856921	1193.69929	2.144	0.0012818	-1.6103	-0.00096274	0.53373	0.00031909	597.8558383514289	73.728	0.55849	73.728	73.521	74.079	0					33	17	2	0	0	0	0.89803	1	30784	30784		1.3295	0.36726	1	852440			39751	2354	19550	19633	46108	46108					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8577758669853	2	597.856921	1193.69929	2.2076	0.0013198	-1.2712	-0.00076	0.93636	0.00055981	597.8559679690128	75.037	1.5192	75.037	74.047	75.566	0					126	47	3	0	0	0	0.89803	3	30956	30956;31095;31148		1.4819	0.41044	1	2856000			39752	2354	19550	19633	46109;46110;46111	46109					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8573486208916	2	597.856921	1193.69929	2.1578	0.00129	-0.9659	-0.00057747	1.1919	0.00071257	597.8561808912489	77.241	2.5647	77.241	76.373	78.938	0					244	81	4	0	0	0	0.89803	6	31886	31886;32027;32167;32298;32391;32549		1.4819	0.41044	1	9732000			39753	2354	19550	19633	46112;46113;46114;46115;46116;46117	46112					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8574096560478	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.534	1	78.534	78.034	79.034	0								0	0	0	0.66176	1	32692	32692		1.4819	0.28856	1				39754	2354	19550	19633	46118	46118					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8573486208916	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.67	1	78.67	78.17	79.17	0								0	0	0	0.66052	1	32748	32748		3.5965	0.8613	1				39755	2354	19550	19633	46119	46119					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8573486208916	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.92	1	78.92	78.42	79.42	0								0	0	0	0.66176	1	32854	32854		1.4819	0.28856	1				39756	2354	19550	19633	46120	46120					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8539916872978	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.033	1	79.033	78.533	79.533	0								0	0	0	0.66176	1	32904	32904		1.4819	0.28856	1				39757	2354	19550	19633	46121	46121					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8576537966728	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.302	1	79.302	78.802	79.802	0								0	0	0	0.66176	1	33019	33019		1.4819	0.41044	1				39758	2354	19550	19633	46122	46122					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8561889529228	2	597.856921	1193.69929	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.558	1	79.558	79.058	80.058	0								0	0	0	0.66176	1	33127	33127		1.4819	0.79152	1				39759	2354	19550	19633	46123	46123					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8575317263603	2	597.856921	1193.69929	2.191	0.0013099	-1.5547	-0.00092949	0.63627	0.0003804	597.8563512686859	73.485	0.61681	73.81	73.553	74.169	0.32494					33	19	3	0	0	0	0.89803	1	30741	30741		1.4819	0.41044	1	951690			39760	2354	19550	19633	46124	46124					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8571044802666	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	0.89803	3	30949	30949;31063;31168		1.4819	0.79152	1	3279500			39761	2354	19550	19633	46125;46126;46127	46125					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8578369021416	2	597.856921	1193.69929	2.285	0.0013661	-0.20279	-0.00012124	2.0822	0.0012448	597.8564739538344	75.581	0.80588	75.902	75.678	76.484	0.32164					58	25	3	0	0	0	0.89803	1	31697	31697		1.3295	0.25807	1	1165200			39762	2354	19550	19633	46128	46128					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8578369021416	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.89803	9	31895	31895;32009;32331;32372;32728;32776;32829;32937;33016		1.4819	0.41044	1	11246000			39763	2354	19550	19633	46129;46130;46131;46132;46133;46134;46135;46136;46137	46129					0.11018705648439209
VQVRNPLNVR	10	Unmodified	_VQVRNPLNVR_					0	0	0		ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	ENSG00000128000|ENST00000434248|ZNF780B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8578369021416	2	597.856921	1193.69929	2.5642	0.001533	-0.41766	-0.0002497	2.1465	0.0012833	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.89803	2	31716	31716;31917		1.4819	0.95714	1	10594000			39764	2354	19550	19633	46138;46139	46138					0.11018705648439209
VQVSHAKGPRV	11	Unmodified	_VQVSHAKGPRV_					0	0	0			REV__ENSG00000225781|ENST00000418316|OR6V1	REV__ENSG00000225781|ENST00000418316|OR6V1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3443481326103	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	1.037	1	32500	32500		1.0715	0.46996	1	9065200	+		39765	11892	19551	19634	46140	46140					0.09147016757128767
VQVTVRFIG	9	Unmodified	_VQVTVRFIG_					0	0	0			REV__ENST00000486192.1_1_10:108380089-108389119:-|nuORF	REV__ENST00000486192.1_1_10:108380089-108389119:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.8054687380791	2	509.805834	1017.59712	2.0502	0.0010452	-1.2104	-0.00061706	0.83983	0.00042815	509.80470563200663	67.746	0.83211	69.616	69.147	69.979	1.87					45	26	2	0	0	0	0.71526	1	28424	28424		6.7232	1.4925	1	1041600	+		39766	9243	19552	19635	46141	46141					0.08902039576855714
VQVVLDGL	8	Unmodified	_VQVVLDGL_					0	0	0		ENSG00000186432|ENST00000334256|KPNA4;ENSG00000102753|ENST00000261667|KPNA3	ENSG00000186432|ENST00000334256|KPNA4	ENSG00000186432|ENST00000334256|KPNA4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7520629763603	2	421.752736	841.490919	2.5184	0.0010622	-2.7919	-0.0011775	-0.27351	-0.00011536	421.751361890409	69.877	0.74308	71.231	70.717	71.46	1.3536					45	23	3	0	0	0	0.89051	1	29305	29305		2.3027	0	1	4711800			39767	4789	19553	19636	46142	46142					0.06383284011508294
VQWHDHGLL	9	Unmodified	_VQWHDHGLL_					0	0	0		ENST00000375749.7_1_20:30823945-30824224:+|nuORF	ENST00000375749.7_1_20:30823945-30824224:+|nuORF	ENST00000375749.7_1_20:30823945-30824224:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.7847778201103	2	552.78289	1103.55123	1.9475	0.0010765	-0.047461	-2.6236E-05	1.9	0.0010503	552.7828037724187	89.512	0.31351	89.512	89.369	89.683	0					16	9	2	0	0	0	0.77526	1	37451	37451		4.3292	0	1	464360			39768	6184	19554	19637	46143	46143					0.0035939439460435096
VQWRNLGSL	9	Unmodified	_VQWRNLGSL_					0	0	0		chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|23|3|anti-sense;AluSg_dup29696|chr16:69374686-69374983:+|2.3368288603354173|0.0117409257950445|7.64|428.0|17|2|anti-sense;AluYf1_dup91|chr1:154980524-154980825:+|1.0190371886422676|0.2721315892790703|1.9|429.0|22|3|anti-sense;chr1:27260382-27260956|107|13.63|0.33|5.38|+|1|TE_info:AluY,AluY_dup1577,Alu,SINE,donor,-,27260095,27260382|None,WDTC1|1;ENST00000486855.1_1_1:114268430-114281397:-|nuORF;nc|nan|Q6UX73|C16orf89	chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1	chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	537.2465087771416	2	536.79854	1071.58253	3.4063	0.0018285	1.0218	0.00054848	4.4281	0.002377	536.7994087863303	74.536	0.35706	75.85	75.647	76.004	1.3142					19	11	2	0	0	0	0.10591	1	31348	31348		4.3292	0	1	1330300			39769	42	19555	19638	46144	46144					0.04959967428703749
VQWRNLGSL	9	Unmodified	_VQWRNLGSL_					0	0	0		chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1;AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|23|3|anti-sense;AluSg_dup29696|chr16:69374686-69374983:+|2.3368288603354173|0.0117409257950445|7.64|428.0|17|2|anti-sense;AluYf1_dup91|chr1:154980524-154980825:+|1.0190371886422676|0.2721315892790703|1.9|429.0|22|3|anti-sense;chr1:27260382-27260956|107|13.63|0.33|5.38|+|1|TE_info:AluY,AluY_dup1577,Alu,SINE,donor,-,27260095,27260382|None,WDTC1|1;ENST00000486855.1_1_1:114268430-114281397:-|nuORF;nc|nan|Q6UX73|C16orf89	chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1	chr7:6463175-6464394|116|25.09|0.0|21.26|-|1|TE_info:AluSg,AluSg_dup13621,Alu,SINE,donor,+,6464394,6464542|KDELR2,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	536.79854	1071.58253	3.1681	0.0017007	1.0551	0.00056638	4.2233	0.002267	536.7995594308546	74.059	0.39445	75.856	75.687	76.082	1.7962	0.026457	0.00065853	NaN	4.3292	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	877800			39770	42	19555	19638							0.04959967428703749
VQYYVLPGS	9	Unmodified	_VQYYVLPGS_					0	0	0			REV__ENSG00000110925|ENST00000228515|CSRNP2	REV__ENSG00000110925|ENST00000228515|CSRNP2	MSMS	GG20161007_CRH_Patient100_A02_01	1	513.2682983279228	2	513.26875	1024.52295	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.432	1	79.432	78.932	79.932	0								0	0	0	0.32813	1	33074	33074		15.847	0	1		+		39771	9310	19556	19639	46145	46145					0.011666516946434058
VRAAARAP	8	Unmodified	_VRAAARAP_					0	0	0		ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	ENST00000270357.9_2_2:241508179-241513275:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	406.2490112185478	2	406.248486	810.48242	1.4021	0.00056961	-0.4833	-0.00019634	0.91883	0.00037328	406.24831900624537	70.284	1.3955	70.606	70.002	71.397	0.32224					109	44	5	0	0	0	0.89178	3	29331	29331;29516;29581		0.69038	0	1	292300000			39772	5675	19557	19640	46146;46147;46148	46146					0.06959774885547176
VRACLRRLVPP	11	Unmodified	_VRACLRRLVPP_					0	0	0		nc|ENSG00000164362|O14746-4|TERT;nc|ENSG00000164362|O14746-2|TERT;nc|ENSG00000164362|O14746-3|TERT;ENSG00000164362|ENST00000310581|TERT	nc|ENSG00000164362|O14746-4|TERT	nc|ENSG00000164362|O14746-4|TERT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.2655517458916	3	427.26417	1278.77068	2.1191	0.00090541	0.99437	0.00042486	3.1135	0.0013303	427.264529955667	42.177	1.0826	42.498	42.01	43.093	0.32058					155	35	5	0	0	0	1.0191	2	17846	17846;17884		2.6312	0.19645	1	48247000			39773	3774	19558	19641	46149;46150	46149					0.14244502081464816
VRACLRRLVPP	11	Unmodified	_VRACLRRLVPP_					0	0	0		nc|ENSG00000164362|O14746-4|TERT;nc|ENSG00000164362|O14746-2|TERT;nc|ENSG00000164362|O14746-3|TERT;ENSG00000164362|ENST00000310581|TERT	nc|ENSG00000164362|O14746-4|TERT	nc|ENSG00000164362|O14746-4|TERT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2650329470634	3	427.26417	1278.77068	2.3581	0.0010075	0.25042	0.00010699	2.6085	0.0011145	427.2641553664048	40.681	0.4704	42.007	41.834	42.305	1.3254					51	14	4	0	0	0	1.0365	1	17116	17116		1.2148	0	1	26825000			39774	3774	19558	19641	46151	46151					0.14244502081464816
VRAVRGGP	8	Unmodified	_VRAVRGGP_					0	0	0			REV__ENST00000324331.10_1_6:5261416-5261566:+|nuORF	REV__ENST00000324331.10_1_6:5261416-5261566:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2486755251884	2	406.248486	810.48242	1.1635	0.00047267	0.39782	0.00016161	1.5613	0.00063428	406.2485207401386	68.962	0.98308	70.815	70.468	71.451	1.853					90	31	5	0	0	0	0.89178	1	28862	28862		0.69038	0	1	95586000	+		39775	12423	19559	19642	46152	46152					0.06959774885569914
VRDTRDTWEL	10	Unmodified	_VRDTRDTWEL_					0	0	0		tr|A0A553SPA6|A0A553SPA6_NIACIDUF881domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25945PE=3SV=1	tr|A0A553SPA6|A0A553SPA6_NIACIDUF881domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25945PE=3SV=1	tr|A0A553SPA6|A0A553SPA6_NIACIDUF881domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25945PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8880798220634	3	430.886081	1289.63641	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.056	1	27.772	27.272	28.272	1.7167								0	0	0	0.6617	1	10896	10896		1.5923	0.13716	1				39776	16458	19560	19643	46153	46153					0.0031809506976969715
VREIRKHK	8	Unmodified	_VREIRKHK_					0	0	0		ENST00000256078.8_1_12:25362731-25368373:-|nuORF;ENSG00000133703|ENST00000311936|KRAS	ENST00000256078.8_1_12:25362731-25368373:-|nuORF	ENST00000256078.8_1_12:25362731-25368373:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0698425173759	3	355.892842	1064.6567	-1.0454	-0.00037204	-1.6984	-0.00060444	-2.7438	-0.00097648	356.22593866645235	79.304	0.15461	79.304	79.237	79.391	0					6	4	2	0	0	0	2.3239	1	33032	33032		0.40072	0	1	111500			39777	2579	19561	19644	46154	46154					0.1269535531089332
VRELLGNG	8	Unmodified	_VRELLGNG_					0	0	0			REV__nc|ENSG00000007062|O43490-5|PROM1	REV__nc|ENSG00000007062|O43490-5|PROM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	429.2477599978447	2	429.245609	856.476666	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.16	103.66	104.66	0.059502								0	0	0	1.0178	1	43840	43840		2.3027	0	1		+		39778	8512	19562	19645	46155	46155					0.04268631583249771
VRELSRKTNKL	11	Unmodified	_VRELSRKTNKL_					0	0	0			REV__ENST00000244230.6_1_2:71357544-71357592:+|nuORF	REV__ENST00000244230.6_1_2:71357544-71357592:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4115478396416	2	672.409518	1342.80448	2.0659	0.0013891	-0.67527	-0.00045405	1.3906	0.00093505	672.4089314371103	81.937	0.95213	82.217	81.875	82.827	0.2802					51	30	2	0	0	0	1.0388	1	34184	34184		0.35063	0	1	1088200	+		39779	12130	19563	19646	46156	46156					0.146792020542307
VRELVGLG	8	Unmodified	_VRELVGLG_					0	0	0		tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	842.5120117068291	1	842.509429	841.502152	1.2209	0.0010286	2.674	0.0022528	3.8949	0.0032815	842.5114729117381	104.54	0.089249	104.54	104.47	104.56	0					9	4	3	0	0	0	0.89051	1	44136	44136		2.3027	0	1	40763000			39780	16522	19564	19647	46157	46157					0.07506106105688559
VRELVGLG	8	Unmodified	_VRELVGLG_					0	0	0		tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	842.5118286013603	1	842.509429	841.502152	2.7798	0.002342	1.1801	0.00099422	3.9599	0.0033363	842.5096000982876	104.5	0.089691	104.56	104.5	104.59	0.056801					10	4	3	0	0	0	0.89051	1	44088	44088		2.3027	0	1	26017000			39781	16522	19564	19647	46158	46158					0.07506106105688559
VRELVGLG	8	Unmodified	_VRELVGLG_					0	0	0		tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	842.5115844607353	1	842.509429	841.502152	2.9218	0.0024616	0.33045	0.00027841	3.2522	0.00274	842.5093689323734	104.47	0.092674	104.63	104.58	104.67	0.16055					12	4	3	0	0	0	0.89051	1	44266	44266		2.3027	0	1	46953000			39782	16522	19564	19647	46159	46159					0.07506106105688559
VRELVGLG	8	Unmodified	_VRELVGLG_					0	0	0		tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	tr|A0A553SQN2|A0A553SQN2_NIACITypeII/IVsecretionsystemproteinOS=NialliacirculansOX=1397GN=CEQ21_07870PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	842.509429	841.502152	3.0449	0.0025654	-0.23744	-0.00020004	2.8075	0.0023653	842.5085594637908	104.43	0.091354	104.61	104.56	104.65	0.1731	0.025273	-0.0011005	NaN	2.3027	13	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	52748000			39783	16522	19564	19647							0.07506106105688559
VREPGVRG	8	Unmodified	_VREPGVRG_					0	0	0			REV__ENST00000267396.8_1_14:23352549-23354030:+|nuORF	REV__ENST00000267396.8_1_14:23352549-23354030:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2530700564384	2	435.251226	868.487899	2.834	0.0012335	0.3174	0.00013815	3.1514	0.0013716	435.2514107182323	73.527	0.52819	75.323	75.039	75.567	1.7962					41	16	3	0	0	0	0.89178	1	30812	30812		0.69038	0	1	4177800	+		39784	12223	19565	19648	46160	46160					0.04839453677391248
VRESGTLL	8	Unmodified	_VRESGTLL_					0	0	0			REV__nc|ENSG00000038427|P13611-3|VCAN	REV__nc|ENSG00000038427|P13611-3|VCAN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	438.2884094119072	2	437.753267	873.491981	3.3641	0.0014727	0.020846	9.1253E-06	3.385	0.0014818	437.75232394996664	103.43	0.12521	103.59	103.54	103.66	0.16445					6	5	2	0	0	0	2.3239	1	43597	43597		0	0	1	3350100	+		39785	8589	19566	19649	46161	46161					0.0501749838044816
VRFLEQQNK	9	Unmodified	_VRFLEQQNK_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;CON__Q9DCV7;ENSG00000161849|ENST00000257951|KRT84;CON__Q6ISB0;CON__Q9NSB2;nc|ENSG00000131095|P14136-2|GFAP;ENSG00000135443|ENST00000257901|KRT85;CON__Q8VED5;CON__Q8N1N4-2;CON__Q7RTT2;ENSG00000170423|ENST00000304620|KRT78;ENST00000515599.1_1_5:146086275-146086944:-|nuORF;CON__P78386;ENSG00000131095|ENST00000588735|GFAP;CON__Q14533;ENSG00000205426|ENST00000327741|KRT81;ENSG00000170523|ENST00000293670|KRT83;CON__P78385;CON__Q6NT21;CON__O43790;CON__Q61726;nc|ENSG00000170423|Q8N1N4-2|KRT78;nc|ENSG00000131095|P14136-3|GFAP;ENSG00000170442|ENST00000423955|KRT86;CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__P07744;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;CON__H-INV:HIT000292931;CON__Q8BGZ7;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENSG00000205420|ENST00000330722|KRT6A;ENSG00000170465|ENST00000252250|KRT6C;CON__P04259;CON__P48668;CON__P02538;ENSG00000185479|ENST00000252252|KRT6B;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;ENSG00000186442|ENST00000417996|KRT3;CON__P12035;ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;CON__P50446;ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	CON__P08729;CON__Q922U2;ENSG00000185069|ENST00000332411|KRT76;nc|ENSG00000170421|P05787-2|KRT8;ENSG00000186442|ENST00000417996|KRT3;ENSG00000026025|ENST00000544301|VIM;CON__P50446;ENSG00000185640|ENST00000330553|KRT79	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.3237792849541	2	581.32238	1160.63021	0.05866	3.41E-05	1.4897	0.00086597	1.5483	0.00090007	581.3234317710611	15.016	0.15968	15.785	15.674	15.834	0.76937					10	4	3	0	0	0	0.087723	1	6245	6245		53.404	11.564	1	1109600		+	39786	343;345;363;362;353;347;626;352	19567	19650	46162	46162					0.05631621628890571
VRFLEQQNK	9	Unmodified	_VRFLEQQNK_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;CON__Q9DCV7;ENSG00000161849|ENST00000257951|KRT84;CON__Q6ISB0;CON__Q9NSB2;nc|ENSG00000131095|P14136-2|GFAP;ENSG00000135443|ENST00000257901|KRT85;CON__Q8VED5;CON__Q8N1N4-2;CON__Q7RTT2;ENSG00000170423|ENST00000304620|KRT78;ENST00000515599.1_1_5:146086275-146086944:-|nuORF;CON__P78386;ENSG00000131095|ENST00000588735|GFAP;CON__Q14533;ENSG00000205426|ENST00000327741|KRT81;ENSG00000170523|ENST00000293670|KRT83;CON__P78385;CON__Q6NT21;CON__O43790;CON__Q61726;nc|ENSG00000170423|Q8N1N4-2|KRT78;nc|ENSG00000131095|P14136-3|GFAP;ENSG00000170442|ENST00000423955|KRT86;CON__Q922U2;CON__Q5XQN5;ENST00000552629.5_1_12:52910419-52914113:-|nuORF;ENSG00000186081|ENST00000252242|KRT5;CON__P13647;CON__P07744;ENSG00000170454|ENST00000252245|KRT75;CON__O95678;ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;CON__H-INV:HIT000292931;CON__Q8BGZ7;ENST00000550170.5_1_12:53294858-53298765:-|nuORF;ENSG00000205420|ENST00000330722|KRT6A;ENSG00000170465|ENST00000252250|KRT6C;CON__P04259;CON__P48668;CON__P02538;ENSG00000185479|ENST00000252252|KRT6B;ENST00000562022.1_1_15:43093683-43094592:-|nuORF;ENSG00000186442|ENST00000417996|KRT3;CON__P12035;ENSG00000026025|ENST00000544301|VIM;ENST00000485947.1_1_10:17271421-17272784:+|nuORF;CON__P50446;ENSG00000185640|ENST00000330553|KRT79;CON__Q5XKE5	CON__P08729;CON__Q922U2;ENSG00000185069|ENST00000332411|KRT76;nc|ENSG00000170421|P05787-2|KRT8;ENSG00000186442|ENST00000417996|KRT3;ENSG00000026025|ENST00000544301|VIM;CON__P50446;ENSG00000185640|ENST00000330553|KRT79	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.3235961794853	2	581.32238	1160.63021	0.15184	8.8268E-05	1.121	0.00065163	1.2728	0.0007399	581.3233165663987	14.86	0.18907	15.757	15.68	15.869	0.89664					11	5	3	0	0	0	0.042285	1	6177	6177		74.2	39.798	1	1222700		+	39787	343;345;363;362;353;347;626;352	19567	19650	46163	46163					0.05631621628890571
VRFQALKQ	8	Unmodified	_VRFQALKQ_					0	0	0		ENST00000489129.5_1_15:63032816-63046163:+|nuORF	ENST00000489129.5_1_15:63032816-63046163:+|nuORF	ENST00000489129.5_1_15:63032816-63046163:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.2963439822197	2	495.298176	988.581799	1.9677	0.00097462	-3.311	-0.0016399	-1.3433	-0.00066532	495.2959473085145	69.643	0.28179	69.965	69.847	70.129	0.32224					15	8	2	0	0	0	0.89051	1	29141	29141		2.3027	0.4585	1	1107900			39788	6892	19568	19651	46164	46164					0.08705172779650638
VRFYRLFL	8	Unmodified	_VRFYRLFL_					0	0	0		Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|59|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|59|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|59|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3389160037041	2	557.332019	1112.64948	2.4643	0.0013735	-0.27461	-0.00015305	2.1897	0.0012204	557.8306587294351	85.229	0.50276	86.388	86.086	86.589	1.159					35	17	3	0	0	0	0.88958	1	35716	35716		2.8892	0	1	5223200			39789	7609	19569	19652	46165	46165					0.0976662271045825
VRGAAPPG	8	Unmodified	_VRGAAPPG_					0	0	0		ENST00000591854.5_1_18:55297552-55297738:+|nuORF	ENST00000591854.5_1_18:55297552-55297738:+|nuORF	ENST00000591854.5_1_18:55297552-55297738:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	724.4111816287041	1	724.410049	723.402772	2.6322	0.0019068	1.4615	0.0010587	4.0937	0.0029655	724.4094439255784	104.38	0.2254	104.55	104.45	104.67	0.1731					25	11	3	0	0	0	0.89008	1	44154	44154		2.5775	0	1	20790000			39790	7493	19570	19653	46166	46166					0.030007082115730555
VRGAPAIA	8	Unmodified	_VRGAPAIA_					0	0	0		ENST00000589290.1_1_19:13875402-13879305:+|nuORF;ENST00000588526.5_1_19:13875372-13879175:+|nuORF;ENST00000591688.5_1_19:13875372-13879601:+|nuORF;nc|ENSG00000037757|Q9BV20-2|MRI1;ENSG00000037757|ENST00000040663|MRI1	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	754.4587890505791	1	754.456999	753.449723	2.4805	0.0018714	0.38814	0.00029284	2.8687	0.0021643	754.4567793000784	104.43	0.15042	104.59	104.54	104.7	0.16055					17	7	3	0	0	0	0.88958	1	44231	44231		2.8892	0	1	210900000			39791	7474	19571	19654	46167	46167					0.06313567762708772
VRGAPAIA	8	Unmodified	_VRGAPAIA_					0	0	0		ENST00000589290.1_1_19:13875402-13879305:+|nuORF;ENST00000588526.5_1_19:13875372-13879175:+|nuORF;ENST00000591688.5_1_19:13875372-13879601:+|nuORF;nc|ENSG00000037757|Q9BV20-2|MRI1;ENSG00000037757|ENST00000040663|MRI1	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	ENST00000589290.1_1_19:13875402-13879305:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	754.456999	753.449723	2.7378	0.0020655	-0.88664	-0.00066893	1.8511	0.0013966	754.4560217061065	104.4	0.11143	104.57	104.5	104.62	0.1731	0.019105	-0.0010453	NaN	2.8892	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196240000			39792	7474	19571	19654							0.06313567762708772
VRGEIYLVR	9	Unmodified	_VRGEIYLVR_					0	0	0			REV__chr1:28508901-28509337|91|32.74|0.13|7.94|+|0|RCC1,None|1	REV__chr1:28508901-28509337|91|32.74|0.13|7.94|+|0|RCC1,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8311035037041	2	552.82984	1103.64513	0.77256	0.00042709	1.0699	0.00059149	1.8425	0.0010186	552.8306591045394	31.223	0.32066	33.048	32.865	33.186	1.8246					18	10	2	0	0	0	0.67936	1	13116	13116		8.1555	1.4324	1	1364500	+		39793	8222	19572	19655	46168	46168					0.09745113496887825
VRGRARAV	8	Unmodified	_VRGRARAV_					0	0	0			REV__ENST00000282516.12_2_5:36876878-36877172:+|nuORF	REV__ENST00000282516.12_2_5:36876878-36877172:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.7803222537041	2	442.780485	883.546417	1.5673	0.00069395	-4.1936	-0.0018569	-2.6264	-0.0011629	442.77860935151176	55.508	0.16793	55.508	55.385	55.553	0					8	5	2	0	0	0	0.89176	1	23129	23129		0.79363	0	1	957620	+		39794	12261	19573	19656	46169	46169					0.09998555042500357
VRHKILNML	9	Unmodified	_VRHKILNML_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3450805544853	2	562.342061	1122.66957	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.577	1	52.577	52.077	53.077	0								0	0	0	0.42693	1	21927	21927		0.6015	0	1				39795	770	19574	19657	46170	46170					0.11314050378791762
VRHKWHPEVC	10	Unmodified	_VRHKWHPEVC_					0	0	0		ENSG00000177105|ENST00000351018|RHOG	ENSG00000177105|ENST00000351018|RHOG	ENSG00000177105|ENST00000351018|RHOG	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7827	1	1.7827	1.2827	2.2827	0								0	0	0	0.66254	1	731	731		0.15932	0	1				39796	4434	19575	19658	46171	46171					0.011907902252232816
VRHLKKCK	8	Unmodified	_VRHLKKCK_					0	0	0		ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3187133669853	2	506.315846	1010.61714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.709	1	33.709	33.209	34.209	0								0	0	0	1.0178	1	14125	14125		2.3027	1.5091	1				39797	3075	19576	19659	46172	46172					0.1122551203580997
VRHLKKCK	8	Unmodified	_VRHLKKCK_					0	0	0		ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3183166384697	2	506.315846	1010.61714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.833	1	33.833	33.333	34.333	0								0	0	0	1.0178	1	14178	14178		2.0598	0.86641	1				39798	3075	19576	19659	46173	46173					0.1122551203580997
VRHLKKCK	8	Unmodified	_VRHLKKCK_					0	0	0		ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	MSMS	GG20161007_CRH_Patient100_A02_01	1	506.3179504275322	2	506.315846	1010.61714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.104	1	34.104	33.604	34.604	0								0	0	0	1.0178	1	14292	14292		2.0598	1.4583	1				39799	3075	19576	19659	46174	46174					0.1122551203580997
VRHLKKCK	8	Unmodified	_VRHLKKCK_					0	0	0		ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3171569705009	2	506.315846	1010.61714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.5	1	33.778	33.278	34.278	1.2782								0	0	0	1.0178	1	13631	13631		2.3027	1.5091	1				39800	3075	19576	19659	46175	46175					0.1122551203580997
VRHLKKCK	8	Unmodified	_VRHLKKCK_					0	0	0		ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	ENSG00000144395|ENST00000389175|CCDC150	MSMS	GG20161007_CRH_Patient100_W632_01	3	506.3179504275322	2	506.315846	1010.61714	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.682	1	33.96	33.46	34.46	1.2782								0	0	0	1.0178	1	13707	13707		2.5775	0.27475	1				39801	3075	19576	19659	46176	46176					0.1122551203580997
VRHLRIHT	8	Unmodified	_VRHLRIHT_					0	0	0		ENSG00000196267|ENST00000682614|ZNF836	ENSG00000196267|ENST00000682614|ZNF836	ENSG00000196267|ENST00000682614|ZNF836	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.3155395388603	2	516.314692	1030.61483	2.5726	0.0013283	-0.20535	-0.00010603	2.3672	0.0012222	516.3145113483018	83.981	0.61716	83.981	83.689	84.306	0					71	19	5	0	0	0	0.89198	1	34985	34985		0	0	1	135590000			39802	4929	19577	19660	46177	46177					0.10074799622339015
VRHRLRKKR	9	Unmodified	_VRHRLRKKR_					0	0	0			REV__nc|ENSG00000163126|Q86SG2-2|ANKRD23	REV__nc|ENSG00000163126|Q86SG2-2|ANKRD23	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	312.1360046267509	4	312.961358	1247.81632	-3.0602	-0.00095773	-0.16642	-5.2084E-05	-3.2267	-0.0010098	312.9615640066749	22.766	0.11544	22.766	22.694	22.809	0					5	3	2	0	0	0	0.11957	1	9498	9498		0	0	1	3585600	+		39803	10673	19578	19661	46178	46178					0.20232908378716274
VRIFRKKKR	9	Unmodified	_VRIFRKKKR_					0	0	0		nc|ENSG00000165071|Q6P5X7-3|TMEM71;ENSG00000165071|ENST00000677595|TMEM71	nc|ENSG00000165071|Q6P5X7-3|TMEM71	nc|ENSG00000165071|Q6P5X7-3|TMEM71	MSMS	GG20161007_CRH_Patient100_A02_02	2	615.9143554568291	2	615.917116	1229.81968	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.263	1	12.352	11.852	12.852	0.089381								0	0	0	0.42693	1	5088	5088		0.52476	0	1				39804	3814	19579	19662	46179	46179					0.21396158432708035
VRIGIPALDR	10	Unmodified	_VRIGIPALDR_					0	0	0			REV__ENSG00000072506|ENST00000168216|HSD17B10	REV__ENSG00000072506|ENST00000168216|HSD17B10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1109.681079089642	1	1109.67895	1108.67168	2.7854	0.0030909	-0.87507	-0.00097105	1.9104	0.0021199	1109.6776437682736	107.51	0.17332	107.67	107.56	107.73	0.15781					27	8	4	0	0	0	0.89803	1	46235	46235		0	0	1	261970000	+		39805	8738	19580	19663	46180	46180					0.1216880238819158
VRILRRTS	8	Unmodified	_VRILRRTS_					0	0	0			REV__ENSG00000188906|ENST00000298910|LRRK2	REV__ENSG00000188906|ENST00000298910|LRRK2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	334.1863891482353	3	334.217325	999.630147	2.1067	0.00070411	1.3833	0.00046233	3.4901	0.0011664	334.2183695803197	72.844	0.12875	74.654	74.574	74.703	1.8101					5	3	2	0	0	0	2.3239	1	30551	30551		0.40072	0	1	176610	+		39806	11593	19581	19664	46181	46181					0.13031666419556132
VRIVLLILL	9	Unmodified	_VRIVLLILL_					0	0	0			REV__OR10G7|p.F112Sfs*9|1|0.03|ENSG00000182634|chr11:124038667-124038668|-/G|frameshift_variant	REV__OR10G7|p.F112Sfs*9|1|0.03|ENSG00000182634|chr11:124038667-124038668|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3854858279228	2	526.38372	1050.75289	3.2988	0.0017365	-0.0012615	-6.6403E-07	3.2976	0.0017358	526.383760391334	113.05	0.16233	113.2	113.09	113.25	0.14912					6	4	2	0	0	0	0.59203	1	48967	48967		11.64	0	1	915840	+		39807	11358	19582	19665	46182	46182					0.22954110098271485
VRIWDTDR	8	Unmodified	_VRIWDTDR_					0	0	0		BAIAP2-RPTOR|2|fusion;BAIAP2-RPTOR|1|fusion;nc|ENSG00000141564|Q8N122-3|RPTOR;ENSG00000141564|ENST00000306801|RPTOR	BAIAP2-RPTOR|2|fusion	BAIAP2-RPTOR|2|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	530.2150756716728	2	530.780348	1059.54614	0.62836	0.00033352	0.15333	8.1384E-05	0.78169	0.0004149	530.7802074192055	18.552	0.33062	18.725	18.573	18.903	0.17285					16	10	3	0	0	0	2.3239	1	7742	7742		3.9444	0.66309	1	339850			39808	101	19583	19666	46183	46183					0.01875090531962087
VRIWDTDR	8	Unmodified	_VRIWDTDR_					0	0	0		BAIAP2-RPTOR|2|fusion;BAIAP2-RPTOR|1|fusion;nc|ENSG00000141564|Q8N122-3|RPTOR;ENSG00000141564|ENST00000306801|RPTOR	BAIAP2-RPTOR|2|fusion	BAIAP2-RPTOR|2|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	530.780348	1059.54614	0.8242	0.00043747	-0.55086	-0.00029239	0.27334	0.00014508	531.2809315700117	18.954	0.17808	18.954	18.835	19.013	0	0.11434	-0.00060717	NaN	3.9444	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	290830			39809	101	19583	19666							0.01875090531962087
VRKGELGKG	9	Unmodified	_VRKGELGKG_					0	0	0			REV__tr|A0A553ST59|A0A553ST59_NIACIUroporphyrinogen-IIIsynthaseOS=NialliacirculansOX=1397GN=CEQ21_04245PE=4SV=1	REV__tr|A0A553ST59|A0A553ST59_NIACIUroporphyrinogen-IIIsynthaseOS=NialliacirculansOX=1397GN=CEQ21_04245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2887145876884	2	472.287808	942.561064	2.2787	0.0010762	0.075276	3.5552E-05	2.354	0.0011118	472.28760227699803	78.987	1.1995	78.987	78.441	79.641	0					96	38	5	0	0	0	0.85403	1	32922	32922		0	0	1	189500000	+		39810	15230	19584	19667	46184	46184					0.08748582400016858
VRKGELGKG	9	Unmodified	_VRKGELGKG_					0	0	0			REV__tr|A0A553ST59|A0A553ST59_NIACIUroporphyrinogen-IIIsynthaseOS=NialliacirculansOX=1397GN=CEQ21_04245PE=4SV=1	REV__tr|A0A553ST59|A0A553ST59_NIACIUroporphyrinogen-IIIsynthaseOS=NialliacirculansOX=1397GN=CEQ21_04245PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2886840701103	2	472.287808	942.561064	2.4251	0.0011453	0.05505	2.6E-05	2.4801	0.0011713	472.28773622635293	78.785	1.0207	79.095	78.738	79.759	0.30933					85	32	5	0	0	0	0.85403	1	32966	32966		0	0	1	172350000	+		39811	15230	19584	19667	46185	46185					0.08748582400016858
VRKGTGRGVP	10	Unmodified	_VRKGTGRGVP_					0	0	0			REV__nc|ENSG00000118007|Q8WVM7-2|STAG1	REV__nc|ENSG00000118007|Q8WVM7-2|STAG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8766052126884	3	342.87708	1025.60941	-1.4852	-0.00050925	-1.0281	-0.00035251	-2.5133	-0.00086177	342.8765924607928	40.18	1.0974	40.18	39.544	40.642	0					99	34	4	0	0	0	0.8872	2	16800	16800;16839		2.8433	0.3448	1	8171300	+		39812	9052	19585	19668	46186;46187	46186					0.09763076039894258
VRKHDKLKK	9	Unmodified	_VRKHDKLKK_					0	0	0		ENST00000464058.1_1_21:18981288-18985128:-|nuORF;ENSG00000154640|ENST00000348354|BTG3;nc|ENSG00000154640|Q14201-2|BTG3	ENST00000464058.1_1_21:18981288-18985128:-|nuORF	ENST00000464058.1_1_21:18981288-18985128:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1536743044853	3	384.583897	1150.72986	0.3819	0.00014687	-2.6738	-0.0010283	-2.2919	-0.00088144	384.58289104464995	27.361	0.49497	28.64	28.534	29.029	1.2789					23	15	2	0	0	0	0.11954	1	11546	11546		0.26902	0	1	533770			39813	3391	19586	19669	46188	46188					0.16052484033502878
VRKICRHL	8	Unmodified	_VRKICRHL_					0	0	0		nc|ENSG00000182208|Q70IA6|MOB2;ENSG00000182208|ENST00000329957|MOB2	nc|ENSG00000182208|Q70IA6|MOB2	nc|ENSG00000182208|Q70IA6|MOB2	MSMS	GG20161007_CRH_Patient100_W632_01	3	342.2120849490166	3	342.211406	1023.61239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.344	1	27.615	27.115	28.115	1.2715								0	0	0	1.0178	1	11032	11032		0.45834	0	1				39814	4608	19587	19670	46189	46189					0.10152627893057797
VRKIIGTL	8	Unmodified	_VRKIIGTL_					0	0	0		tr|A0A553SF50|A0A553SF50_NIACItRNApseudouridinesynthaseAOS=NialliacirculansOX=1397GN=truAPE=3SV=1	tr|A0A553SF50|A0A553SF50_NIACItRNApseudouridinesynthaseAOS=NialliacirculansOX=1397GN=truAPE=3SV=1	tr|A0A553SF50|A0A553SF50_NIACItRNApseudouridinesynthaseAOS=NialliacirculansOX=1397GN=truAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	301.1283752322197	3	300.539405	898.596387	-0.057605	-1.7312E-05	1.9337	0.00058115	1.8761	0.00056384	300.5400025943356	25.205	0.36231	26.921	26.727	27.089	1.7167					20	11	2	0	0	0	2.3239	1	10486	10486		0	0	1	2060600			39815	16040	19588	19671	46190	46190					0.14303244927828018
VRKKAKKIIQI	11	Unmodified	_VRKKAKKIIQI_					0	0	0		tr|A0A553SSI1|A0A553SSI1_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03050PE=4SV=1	tr|A0A553SSI1|A0A553SSI1_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03050PE=4SV=1	tr|A0A553SSI1|A0A553SSI1_NIACIEALdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03050PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	442.3112670779228	3	442.309885	1323.90782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.09	1	104.25	103.75	104.75	0.16055								0	0	0	0.63775	1	44033	44033		0.094841	0	1				39816	16614	19589	19672	46191	46191					0.2588273423270948
VRKKKHKK	8	Unmodified	_VRKKKHKK_					0	0	0			REV__ENST00000549307.5_1_12:58109828-58113249:+|nuORF	REV__ENST00000549307.5_1_12:58109828-58113249:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.2429992556572	3	351.245215	1050.71382	-2.012	-0.0007067	-2.4749	-0.00086931	-4.4869	-0.001576	351.24432803635915	21.748	0.37172	21.748	21.625	21.997	0					31	11	3	0	0	0	0.89187	2	9020	9020;9126		0.40072	0	1	1939300	+		39817	9944	19590	19673	46192;46193	46192					0.19048822587274117
VRKKMKKK	8	Unmodified	_VRKKMKKK_					0	0	0			REV__ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant	REV__ZNFX1|p.V1053Afs*12|1|0.06|ENSG00000124201|chr20:49252778-49252779|-/TCTCGGCTCACTGCAACCACCG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.9342529177666	3	349.239073	1044.69539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.41	1	111.41	110.91	111.91	0								0	0	0	1.0178	1	48185	48185		0	0	1		+		39818	9637	19591	19674	46194	46194					0.17482944621042407
VRKKPRRGRG	10	Unmodified	_VRKKPRRGRG_					0	0	0		ENST00000595646.5_1_19:53352456-53357596:-|nuORF;ENST00000457749.6_1_19:53311376-53321282:-|nuORF;ENST00000391783.6_3_19:53304828-53321258:-|nuORF	ENST00000595646.5_1_19:53352456-53357596:-|nuORF	ENST00000595646.5_1_19:53352456-53357596:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1991454958916	4	303.199536	1208.76904	-0.38583	-0.00011698	-0.79887	-0.00024222	-1.1847	-0.0003592	303.19926330285165	29.807	1.345	31.089	30.312	31.657	1.2825					134	43	4	0	0	0	0.89803	1	12508	12508		0.62683	0.62683	1	11216000			39819	6250	19592	19675	46195	46195					0.1730062910773995
VRKKPRRGRG	10	Unmodified	_VRKKPRRGRG_					0	0	0		ENST00000595646.5_1_19:53352456-53357596:-|nuORF;ENST00000457749.6_1_19:53311376-53321282:-|nuORF;ENST00000391783.6_3_19:53304828-53321258:-|nuORF	ENST00000595646.5_1_19:53352456-53357596:-|nuORF	ENST00000595646.5_1_19:53352456-53357596:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	303.1990844607353	4	303.199536	1208.76904	-0.51729	-0.00015684	-0.77704	-0.0002356	-1.2943	-0.00039244	303.1992700376234	31.109	1.0006	32.39	31.624	32.625	1.2813					104	31	4	0	0	0	0.8974	1	13056	13056		1.7423	0	1	6480500			39820	6250	19592	19675	46196	46196					0.1730062910773995
VRKLATLC	8	Unmodified	_VRKLATLC_					0	0	0			REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|34|2|sense	REV__L1P1_dup3131|chr21:8366255-8369545:+|1.1341358509163533|0.0129397411743262|6.45|422.0|34|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	452.2783691287041	2	452.275855	902.537157	2.3334	0.0010553	3.6147	0.0016348	5.9481	0.0026902	452.27732837108357	72.046	0.34386	73.387	73.248	73.592	1.3415					15	10	2	0	0	0	0.89176	1	30247	30247		0.79363	0	1	823350	+		39821	14287	19593	19676	46197	46197					0.08199025641977187
VRKLGRARQRR	11	Unmodified	_VRKLGRARQRR_					0	0	0			REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	698.4517700076103	2	698.447634	1394.88072	2.7481	0.0019194	-0.2627	-0.00018348	2.4854	0.0017359	698.4476171960121	105.79	0.11136	105.95	105.91	106.02	0.15859					16	5	4	0	0	0	1.0395	1	45153	45153		0.30703	0	1	49474000	+		39822	13027	19594	19677	46198	46198					0.1990706346487059
VRKLGRARQRR	11	Unmodified	_VRKLGRARQRR_					0	0	0			REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	REV__ENST00000431510.1_1_3:39425059-39430855:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	698.447634	1394.88072	1.43	0.00099877	-3.2154	-0.0022458	-1.7854	-0.001247	698.4440192730907	105.88	0.097054	105.88	105.81	105.91	0	-0.047375	-0.0020849	NaN	0.30703	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17047000	+		39823	13027	19594	19677							0.1990706346487059
VRKLHFVL	8	Unmodified	_VRKLHFVL_					0	0	0			REV__tr|A0A7D6ZHP0|A0A7D6ZHP0_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03685PE=4SV=1	REV__tr|A0A7D6ZHP0|A0A7D6ZHP0_9CLOTGntRfamilytranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_03685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	337.8874389529228	3	337.886917	1010.63892	0.05037	1.7019E-05	0.90923	0.00030722	0.9596	0.00032424	337.8872827357221	19.606	0.30875	19.8	19.684	19.992	0.19342					20	9	3	0	0	0	0.89176	1	8153	8153		0.45834	0	1	794210	+		39824	15653	19595	19678	46199	46199					0.13402640056051496
VRKLKGIP	8	Unmodified	_VRKLKGIP_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.2125121951103	3	304.2114	909.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.502	1	95.626	95.126	96.126	0.12331								0	0	0	1.0178	1	39964	39964		0	0	1				39825	16028	19596	19679	46200	46200					0.15394951164716986
VRKLKGIP	8	Unmodified	_VRKLKGIP_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.2124816775322	3	304.2114	909.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.653	1	95.777	95.277	96.277	0.12331								0	0	0	1.0178	1	40030	40030		0	0	1				39826	16028	19596	19679	46201	46201					0.15394951164716986
VRKLKGIP	8	Unmodified	_VRKLKGIP_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.2124511599541	3	304.2114	909.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.369	1	97.46	96.96	97.96	0.090881								0	0	0	1.0178	1	40742	40742		0	0	1				39827	16028	19596	19679	46202	46202					0.15394951164716986
VRKLKGIP	8	Unmodified	_VRKLKGIP_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	304.2111389040947	3	304.2114	909.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.99	1	103.05	102.55	103.55	0.062805								0	0	0	1.0178	1	43157	43157		0	0	1				39828	16028	19596	19679	46203	46203					0.15394951164716986
VRKLKGIP	8	Unmodified	_VRKLKGIP_					0	0	0		TMX2-CTNND1|2|fusion;TMX2-CTNND1|5|fusion;TMX2-CTNND1|4|fusion;TMX2-CTNND1|3|fusion;TMX2-CTNND1|1|fusion;RTN4RL2-CTNND1|9|fusion;nc|ENSG00000198561|O60716-7|CTNND1;nc|ENSG00000198561|O60716-5|CTNND1;TMX2-CTNND1|11|fusion;nc|ENSG00000198561|O60716-3|CTNND1;nc|ENSG00000198561|O60716-6|CTNND1;TMX2-CTNND1|12|fusion;nc|ENSG00000198561|O60716-4|CTNND1;nc|ENSG00000198561|O60716-2|CTNND1;ENSG00000198561|ENST00000399050|CTNND1;RTN4RL2-CTNND1|8|fusion;RTN4RL2-CTNND1|3|fusion;RTN4RL2-CTNND1|10|fusion;nc|ENSG00000198561|O60716-23|CTNND1;RTN4RL2-CTNND1|4|fusion;RTN4RL2-CTNND1|5|fusion;RTN4RL2-CTNND1|7|fusion;RTN4RL2-CTNND1|1|fusion;RTN4RL2-CTNND1|2|fusion;TMX2-CTNND1|8|fusion;TMX2-CTNND1|9|fusion;TMX2-CTNND1|10|fusion;TMX2-CTNND1|6|fusion;TMX2-CTNND1|7|fusion;TMX2-CTNND1|15|fusion;nc|ENSG00000198561|O60716-9|CTNND1;TMX2-CTNND1|14|fusion;nc|ENSG00000198561|O60716-16|CTNND1;nc|ENSG00000198561|O60716-8|CTNND1;CTNND1|p.L417Sfs*11|1|0.14|ENSG00000198561|chr11:57802025-57802026|-/CAATGGCTTATTTGGAGAGCTCCACACAA|frameshift_variant;nc|ENSG00000198561|O60716-24|CTNND1;nc|ENSG00000198561|O60716-10|CTNND1;RTN4RL2-CTNND1|6|fusion;nc|ENSG00000198561|O60716-19|CTNND1;nc|ENSG00000198561|O60716-22|CTNND1;nc|ENSG00000198561|O60716-20|CTNND1;nc|ENSG00000198561|O60716-21|CTNND1;nc|ENSG00000198561|O60716-18|CTNND1;nc|ENSG00000198561|O60716-17|CTNND1;nc|ENSG00000198561|O60716-13|CTNND1;nc|ENSG00000198561|O60716-11|CTNND1;nc|ENSG00000198561|O60716-14|CTNND1;TMX2-CTNND1|13|fusion;nc|ENSG00000198561|O60716-12|CTNND1;nc|ENSG00000198561|O60716-15|CTNND1;nc|ENSG00000198561|O60716-31|CTNND1;nc|ENSG00000198561|O60716-32|CTNND1;nc|ENSG00000198561|O60716-30|CTNND1;nc|ENSG00000198561|O60716-29|CTNND1;nc|ENSG00000198561|O60716-27|CTNND1;nc|ENSG00000198561|O60716-28|CTNND1;nc|ENSG00000198561|O60716-26|CTNND1;nc|ENSG00000198561|O60716-25|CTNND1	TMX2-CTNND1|2|fusion	TMX2-CTNND1|2|fusion	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.2128784060478	3	304.2114	909.612371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.9	1	103.07	102.57	103.57	0.16445								0	0	0	1.0178	1	43349	43349		0	0	1				39829	16028	19596	19679	46204	46204					0.15394951164716986
VRKNLPNLKK	10	Unmodified	_VRKNLPNLKK_					0	0	0			REV__tr|A0A7D6VRR7|A0A7D6VRR7_9CLOTPBSXfamilyphageterminaselargesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_13200PE=4SV=1	REV__tr|A0A7D6VRR7|A0A7D6VRR7_9CLOTPBSXfamilyphageterminaselargesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_13200PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1983520388603	4	303.200208	1208.77173	-2.5534	-0.00077418	-1.6293	-0.00049399	-4.1826	-0.0012682	303.1997345928274	34.272	0.95454	34.272	34.1	35.055	0					65	31	3	0	0	0	0.89803	1	14320	14320		0.69767	0	1	6239600	+		39830	15423	19597	19680	46205	46205					0.17569039722002344
VRKPLAGW	8	Unmodified	_VRKPLAGW_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	309.5242492556572	3	309.523867	925.549771	0.12317	3.8125E-05	1.5493	0.00047953	1.6724	0.00051766	309.52429644848417	24.294	0.27286	24.537	24.381	24.654	0.24251					25	8	4	0	0	0	0.89152	1	10130	10130		1.6526	0	1	6992100			39831	7577	19598	19681	46206	46206					0.08401805096514181
VRKPLAGW	8	Unmodified	_VRKPLAGW_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	309.5244323611259	3	309.523867	925.549771	-0.30118	-9.3221E-05	1.8459	0.00057135	1.5447	0.00047813	309.5243208780866	21.078	0.43928	22.204	21.866	22.305	1.1254					43	14	4	0	0	0	0.89152	1	8748	8748		1.6526	0	1	9058000			39832	7577	19598	19681	46207	46207					0.08401805096514181
VRKPLAGW	8	Unmodified	_VRKPLAGW_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5242187380791	3	309.523867	925.549771	-0.21079	-6.5244E-05	1.4785	0.00045763	1.2677	0.00039238	309.52426002430934	21.46	0.44779	23.076	22.784	23.232	1.6158					49	14	4	0	0	0	0.89185	1	8958	8958		0.45834	0	1	8765000			39833	7577	19598	19681	46208	46208					0.08401805096514181
VRKPLAGW	8	Unmodified	_VRKPLAGW_					0	0	0		ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	ENST00000610160.1_1_20:31291624-31315937:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	309.523867	925.549771	-0.0018503	-5.727E-07	1.7826	0.00055175	1.7807	0.00055118	309.52430355906057	22.021	0.593	22.244	21.872	22.465	0.223	0.069794	8.5288E-05	NaN	1.6526	49	19	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10252000			39834	7577	19598	19681							0.08401805096514181
VRKQPKILP	9	Unmodified	_VRKQPKILP_					0	0	0			REV__nc|ENSG00000141448|Q92908-2|GATA6	REV__nc|ENSG00000141448|Q92908-2|GATA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2398254275322	3	360.241359	1077.70225	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.45	1	111.45	110.95	111.95	0								0	0	0	0.42693	1	48204	48204		0.26902	0	1		+		39835	10148	19599	19682	46209	46209					0.16650580773261936
VRKRKGTK	8	Unmodified	_VRKRKGTK_					0	0	0			REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.8268005251884	2	486.824892	971.635232	3.2282	0.0015716	0.20965	0.00010206	3.4379	0.0016736	486.82531020300115	107.66	0.23687	107.82	107.68	107.92	0.15781					52	12	5	0	0	0	0.89198	1	46382	46382		0	0	1	6527799999.999999	+		39836	14509	19600	19683	46210	46210					0.14827970282192382
VRKRKGTK	8	Unmodified	_VRKRKGTK_					0	0	0			REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	REV__nc|ENSG00000186153|Q9NZC7-6|WWOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	972.6458618044853	1	972.642508	971.635232	3.0154	0.002933	0.575	0.00055927	3.5905	0.0034922	972.6428295287297	107.66	0.24231	107.82	107.66	107.9	0.15796					47	12	5	0	0	0	0.89198	1	46255	46255		0	0	1	1758699999.9999998	+		39837	14509	19600	19683	46211	46211					0.14827970282192382
VRKRKKGS	8	Unmodified	_VRKRKKGS_					0	0	0			REV__ENST00000523303.5_1_8:28625665-28628621:-|nuORF	REV__ENST00000523303.5_1_8:28625665-28628621:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	320.0916625857353	3	320.213804	957.619582	0.52812	0.00016911	1.2616	0.00040398	1.7897	0.00057309	320.21436958794646	31.449	0.15519	31.74	31.629	31.785	0.29086					6	4	2	0	0	0	2.3239	1	13191	13191		0	0	1	334790	+		39838	9132	19601	19684	46212	46212					0.13907683765137335
VRKRMVLM	8	Unmodified	_VRKRMVLM_					0	0	0			REV__VPS13A-SLC44A1|2|fusion	REV__VPS13A-SLC44A1|2|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	344.2070190310478	3	344.877147	1031.60961	-0.22483	-7.7539E-05	-0.016145	-5.568E-06	-0.24098	-8.3107E-05	345.2107872717571	16.034	0.31452	17.074	16.838	17.153	1.0392					21	14	2	0	0	0	2.3239	1	6640	6640		1.6526	0.45928	1	867380	+		39839	15933	19602	19685	46213	46213					0.09507036443869765
VRKSILKA	8	Unmodified	_VRKSILKA_					0	0	0		tr|A0A7D6ZJP4|A0A7D6ZJP4_9CLOTCation-translocatingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09190PE=4SV=1	tr|A0A7D6ZJP4|A0A7D6ZJP4_9CLOTCation-translocatingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09190PE=4SV=1	tr|A0A7D6ZJP4|A0A7D6ZJP4_9CLOTCation-translocatingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_09190PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.6201660037041	1	914.614562	913.607286	3.1649	0.0028947	2.4361	0.0022281	5.6011	0.0051228	914.6164355928935	106.95	0.19585	107.12	107	107.19	0.16174					19	8	3	0	0	0	0.89178	1	45805	45805		0.69038	0	1	22143000			39840	17110	19603	19686	46214	46214					0.147026473020901
VRKSLGRG	8	Unmodified	_VRKSLGRG_					0	0	0		nc|ENSG00000156983|P55201-4|BRPF1;nc|ENSG00000156983|P55201-3|BRPF1;nc|ENSG00000156983|P55201|BRPF1;ENSG00000156983|ENST00000383829|BRPF1	nc|ENSG00000156983|P55201-4|BRPF1	nc|ENSG00000156983|P55201-4|BRPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7761718630791	2	436.774868	871.535184	2.8249	0.0012339	0.18781	8.2029E-05	3.0127	0.0013159	436.7747897649355	72.328	1.0203	73.658	73.361	74.381	1.3297					100	32	6	0	0	0	0.89198	2	30343	30343;30394		0	0	1	160180000			39841	3461	19604	19687	46215;46216	46215					0.09427732948392986
VRKSLPFV	8	Unmodified	_VRKSLPFV_					0	0	0		ENST00000574109.5_1_16:15793693-15793747:+|nuORF	ENST00000574109.5_1_16:15793693-15793747:+|nuORF	ENST00000574109.5_1_16:15793693-15793747:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.0961486697197	3	315.867522	944.580737	-1.9778	-0.00062474	0.71099	0.00022458	-1.2668	-0.00040016	315.86748803875065	50.078	1.0961	50.078	49.691	50.787	0					49	35	2	0	0	0	2.3239	1	20780	20780		0	0	1	1761600			39842	7403	19605	19688	46217	46217					0.1062295841076093
VRKTSPIRL	9	Unmodified	_VRKTSPIRL_					0	0	0			REV__nc|ENSG00000155275|Q8IYL2-3|TRMT44	REV__nc|ENSG00000155275|Q8IYL2-3|TRMT44	MSMS	GG20161007_CRH_Patient100_W632_01	3	357.2323181033134	3	357.232864	1068.67676	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.858	1	31.14	30.64	31.64	1.2825								0	0	0	0.42693	1	12528	12528		2.4985	1.427	1		+		39843	10492	19606	19689	46218	46218					0.14517106250832512
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2429687380791	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.733	1	83.003	82.503	83.503	0.27029								0	0	0	0.42693	1	34598	34598		0.26902	0	1		+		39844	9170	19607	19690	46219	46219					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2438232302666	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.346	1	83.616	83.116	84.116	0.27029								0	0	0	0.42693	1	34857	34857		0.26902	0	1		+		39845	9170	19607	19690	46220	46220					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2430297732353	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.777	1	84.048	83.548	84.548	0.27029								0	0	0	0.42693	1	35039	35039		0.26902	0	1		+		39846	9170	19607	19690	46221	46221					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2434875369072	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.376	1	82.609	82.109	83.109	1.2332								0	0	0	0.42693	1	34162	34162		0.26902	0	1		+		39847	9170	19607	19690	46222	46222					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2435485720634	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.432	1	83.645	83.145	84.145	1.2125								0	0	0	0.42693	1	34603	34603		0.26902	0	1		+		39848	9170	19607	19690	46223	46223					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2439147830009	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.552	1	83.764	83.264	84.264	1.2125								0	0	0	0.42693	1	34651	34651		0.26902	0	1		+		39849	9170	19607	19690	46224	46224					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2434265017509	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.448	1	83.144	82.644	83.644	1.6959								0	0	0	0.42693	1	34171	34171		0.26902	0	1		+		39850	9170	19607	19690	46225	46225					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2433044314384	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.695	1	83.391	82.891	83.891	1.6959								0	0	0	0.42693	1	34275	34275		0.26902	0	1		+		39851	9170	19607	19690	46226	46226					0.1847800049313264
VRKVAVLVR	9	Unmodified	_VRKVAVLVR_					0	0	0			REV__ENSG00000105379|ENST00000309244|ETFB	REV__ENSG00000105379|ENST00000309244|ETFB	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2434875369072	3	347.241471	1038.70258	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.817	1	83.487	82.987	83.987	1.67								0	0	0	0.42693	1	34326	34326		0.26902	0	1		+		39852	9170	19607	19690	46227	46227					0.1847800049313264
VRKVGGGGT	9	Unmodified	_VRKVGGGGT_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;EIF3J-C21orf59|1|fusion;nc|ENSG00000104131|O75822-2|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	830.4868652224541	1	830.484276	829.477	2.8675	0.0023814	0.29075	0.00024146	3.1583	0.0026229	830.4844069938165	106.6	0.15987	106.76	106.68	106.84	0.15781					14	7	3	0	0	0	0.85403	1	45694	45694		0	0	1	59562000			39853	1450	19608	19691	46228	46228					0.055440513031157934
VRKVIFMLK	9	Unmodified	_VRKVIFMLK_					0	0	0			REV__tr|A0A7D6VP72|A0A7D6VP72_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17620PE=4SV=1	REV__tr|A0A7D6VP72|A0A7D6VP72_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17620PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.5787536501884	3	378.579095	1132.71546	0.023313	8.8257E-06	-0.2265	-8.575E-05	-0.20319	-7.6924E-05	378.5789362596433	29.892	0.70762	31.175	31.042	31.75	1.2825					66	22	5	0	0	0	0.847	1	12625	12625		0.96228	0	1	30066000	+		39854	15352	19609	19692	46229	46229					0.15440695561005668
VRKVLKPI	8	Unmodified	_VRKVLKPI_					0	0	0		ENSG00000120158|ENST00000381750|RCL1	ENSG00000120158|ENST00000381750|RCL1	ENSG00000120158|ENST00000381750|RCL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.2278320193291	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.37	1	103.55	103.05	104.05	0.18066								0	0	0	1.0178	1	43517	43517		0.45834	0	1				39855	2096	19610	19693	46230	46230					0.1815581071583665
VRKVLQLLRLP	11	Unmodified	_VRKVLQLLRLP_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4810058474541	4	334.48032	1333.89217	-2.4259	-0.00081142	0.091848	3.0721E-05	-2.3341	-0.0007807	334.48107277347134	24.719	1.9579	24.719	24.367	26.325	0					284	63	6	0	0	0	1.039	2	10326	10326;10404		0.45452	0	1	149700000			39856	6597	19611	19694	46231;46232	46231					0.2385844771565644
VRKVLQLLRLP	11	Unmodified	_VRKVLQLLRLP_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	334.4797241091728	4	334.48032	1333.89217	-2.3632	-0.00079045	-0.51662	-0.0001728	-2.8798	-0.00096325	334.48073959403655	26.214	1.7252	26.214	25.534	27.259	0					255	56	6	0	0	0	1.0362	1	11314	11314		1.3296	0.11481	1	123080000			39857	6597	19611	19694	46233	46233					0.2385844771565644
VRKVLQLLRLP	11	Unmodified	_VRKVLQLLRLP_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.7321044802666	4	334.48032	1333.89217	1.8974	0.00063463	0.43637	0.00014596	2.3337	0.00078059	334.73160273632374	112.88	0.12425	113.05	112.98	113.1	0.16914					9	3	3	0	0	0	1.0402	1	48967	48967		0.08335	0	1	3035800			39858	6597	19611	19694	46234	46234					0.2385844771565644
VRKVLQLLRLP	11	Unmodified	_VRKVLQLLRLP_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4793273806572	4	334.48032	1333.89217	-0.090081	-3.013E-05	-3.8923	-0.0013019	-3.9823	-0.001332	334.4803209183116	20.821	1.5995	22.395	21.969	23.569	1.5748					258	53	7	0	0	0	1.0362	1	8813	8813		1.3296	0.11481	1	806570000			39859	6597	19611	19694	46235	46235					0.2385844771565644
VRKVLQLLRLP	11	Unmodified	_VRKVLQLLRLP_					0	0	0		ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	ENST00000449200.1_1_22:40502501-40502987:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	334.4815856814384	4	334.48032	1333.89217	2.6953	0.00090152	1.3867	0.00046383	4.082	0.0013654	334.48056891206863	112.86	0.15695	113.01	112.96	113.12	0.14912					8	4	3	0	0	0	1.0402	1	48887	48887		0.08335	0	1	3446100			39860	6597	19611	19694	46236	46236					0.2385844771565644
VRKYLLRL	8	Unmodified	_VRKYLLRL_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.8543578982353	2	530.853119	1059.69168	2.8722	0.0015247	-1.1775	-0.00062505	1.6947	0.00089964	530.8524607611463	107.58	0.2511	107.63	107.5	107.75	0.052452					41	12	5	0	0	0	0.89178	1	46018	46018		0.69038	0	1	475120000			39861	3163	19612	19695	46237	46237					0.16422598118833776
VRLAGGGGG	9	Unmodified	_VRLAGGGGG_					0	0	0		ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	743.4192382693291	1	743.415862	742.408586	1.3647	0.0010146	1.9606	0.0014575	3.3253	0.0024721	743.4172056908657	108.5	0.33986	108.5	108.34	108.68	0					57	15	5	0	0	0	0.85403	3	46702	46702;46763;46815		0	0	1	3059599999.9999995			39862	6052	19613	19696	46238;46239;46240	46238					0.027078067232650938
VRLAGGGGG	9	Unmodified	_VRLAGGGGG_					0	0	0		ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	743.4205200076103	1	743.415862	742.408586	2.7217	0.0020233	0.45864	0.00034096	3.1803	0.0023643	743.4160937273635	108.5	0.36913	108.55	108.36	108.73	0.050644					73	19	5	0	0	0	0.85403	3	46579	46579;46635;46685		0	0	1	3826999999.9999995			39863	6052	19613	19696	46241;46242;46243	46241					0.027078067232650938
VRLAGGGGG	9	Unmodified	_VRLAGGGGG_					0	0	0		ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	743.415862	742.408586	2.4689	0.0018354	1.9387	0.0014412	4.4076	0.0032767	743.4172984603973	108.46	0.15485	108.62	108.53	108.69	0.15898	0.065506	0.00055764	NaN	0	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31343000			39864	6052	19613	19696							0.027078067232650938
VRLAGGGGG	9	Unmodified	_VRLAGGGGG_					0	0	0		ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	ENST00000366878.8_1_1:223536770-223537465:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	743.415862	742.408586	2.6916	0.002001	0.33105	0.00024611	3.0227	0.0022471	743.4155552552866	108.41	0.14175	108.56	108.5	108.64	0.1548	0.0071146	-0.0006375	NaN	0	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4590800			39865	6052	19613	19696							0.027078067232650938
VRLALGVI	8	Unmodified	_VRLALGVI_					0	0	0		SEMA3G|p.V672G|1|0.42|ENSG00000010319|chr3:52435937-52435937|A/C|missense_variant	SEMA3G|p.V672G|1|0.42|ENSG00000010319|chr3:52435937-52435937|A/C|missense_variant	SEMA3G|p.V672G|1|0.42|ENSG00000010319|chr3:52435937-52435937|A/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5706054568291	1	840.566549	839.559273	3.032	0.0025486	0.93293	0.00078419	3.9649	0.0033328	840.5675851984108	107.57	0.47506	107.73	107.31	107.79	0.15796					45	24	3	0	0	0	0.89176	1	46232	46232		0.79363	0	1	29745000			39866	15950	19614	19697	46244	46244					0.13307573382053306
VRLAPIPKNKV	11	Unmodified	_VRLAPIPKNKV_					0	0	0			REV__ENSG00000174720|ENST00000344442|LARP7	REV__ENSG00000174720|ENST00000344442|LARP7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5367919802666	4	309.455308	1233.79213	0.054621	1.6903E-05	1.805	0.00055856	1.8596	0.00057546	309.70684925499745	28.1	0.55231	29.875	29.479	30.031	1.7754					32	17	3	0	0	0	0.14606	1	11735	11735		1.3296	0.21989	1	2597000	+		39867	11131	19615	19698	46245	46245					0.18458210381822937
VRLFRPRKFHK	11	Unmodified	_VRLFRPRKFHK_					0	0	0		ENST00000397936.7_1_5:146763967-146764057:+|nuORF	ENST00000397936.7_1_5:146763967-146764057:+|nuORF	ENST00000397936.7_1_5:146763967-146764057:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	742.4626953005791	2	742.459679	1482.90481	2.1625	0.0016056	0.83511	0.00062003	2.9976	0.0022256	743.4607004007956	85.588	1.1508	86.715	86.412	87.563	1.1265					98	47	3	0	0	0	1.0395	1	35964	35964		0.30703	0	1	16834000			39868	6318	19616	19699	46246	46246					0.18266903898529563
VRLGLALV	8	Unmodified	_VRLGLALV_					0	0	0		ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5673705935478	1	840.566549	839.559273	2.9135	0.002449	-2.1238	-0.0017852	0.78979	0.00066387	840.564639652433	107.81	0.52032	107.96	107.54	108.06	0.15781					64	28	5	0	0	0	0.89176	1	46448	46448		0.79363	0	1	5356100000			39869	5896	19617	19700	46247	46247					0.133075733820192
VRLGLALV	8	Unmodified	_VRLGLALV_					0	0	0		ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5685912966728	1	840.566549	839.559273	2.9134	0.0024489	-0.96151	-0.00080821	1.9519	0.0016407	840.565626979389	108.35	0.63822	108.51	108.33	108.97	0.15781					89	33	4	0	0	0	0.89176	2	46778	46778;46985		0.79363	0	1	170350000			39870	5896	19617	19700	46248;46249	46248					0.133075733820192
VRLGLALV	8	Unmodified	_VRLGLALV_					0	0	0		ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5663940310478	1	840.566549	839.559273	3.0322	0.0025488	-2.5443	-0.0021387	0.48789	0.0004101	840.5642696303833	107.77	0.27406	107.93	107.77	108.05	0.15796					52	14	5	0	0	0	0.89176	1	46460	46460		0.79363	0	1	3956299999.9999995			39871	5896	19617	19700	46250	46250					0.133075733820192
VRLGLALV	8	Unmodified	_VRLGLALV_					0	0	0		ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5683471560478	1	840.566549	839.559273	3.0307	0.0025475	-1.5708	-0.0013204	1.4599	0.0012271	840.5655640410932	108.31	0.58823	108.46	108.35	108.94	0.15795					52	30	3	0	0	0	0.89176	2	46775	46775;46938		0.79363	0	1	45435000			39872	5896	19617	19700	46251;46252	46251					0.133075733820192
VRLGLALV	8	Unmodified	_VRLGLALV_					0	0	0		ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	ENST00000331872.10_1_1:182353105-182353156:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	840.566549	839.559273	2.7789	0.0023359	-1.5013	-0.0012619	1.2776	0.0010739	840.5651961644949	107.85	0.31073	107.9	107.69	108.01	0.052452	-0.013559	-5.1185E-05	NaN	0.79363	60	16	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2988499999.9999995			39873	5896	19617	19700							0.133075733820192
VRLGQGRG	8	Unmodified	_VRLGQGRG_					0	0	0		ENST00000468272.1_1_20:402858-409338:+|nuORF	ENST00000468272.1_1_20:402858-409338:+|nuORF	ENST00000468272.1_1_20:402858-409338:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7518493533134	2	421.751393	841.488233	0.70976	0.00029934	0.39117	0.00016498	1.1009	0.00046432	421.75135351229454	71.067	0.83904	71.067	70.449	71.288	0					54	26	3	0	0	0	0.89051	1	29557	29557		2.3027	0	1	4428000			39874	6716	19618	19701	46253	46253					0.06114873397245901
VRLKGATT	8	Unmodified	_VRLKGATT_					0	0	0			REV__nc|ENSG00000171988|Q15652-3|JMJD1C	REV__nc|ENSG00000171988|Q15652-3|JMJD1C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	845.5240966677666	1	845.520328	844.513051	2.7815	0.0023518	2.3133	0.001956	5.0948	0.0043078	845.5217516931795	106.22	0.12041	106.28	106.21	106.33	0.05455					14	5	3	0	0	0	0.89178	1	45198	45198		0.69038	0	1	51798000	+		39875	11053	19619	19702	46254	46254					0.08457508479943954
VRLKGATT	8	Unmodified	_VRLKGATT_					0	0	0			REV__nc|ENSG00000171988|Q15652-3|JMJD1C	REV__nc|ENSG00000171988|Q15652-3|JMJD1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	845.520328	844.513051	1.2165	0.0010286	3.9832	0.0033679	5.1997	0.0043965	845.5232326243201	106.26	0.1337	106.26	106.17	106.31	0	-0.051655	0.0016187	NaN	0.69038	19	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43714000	+		39876	11053	19619	19702							0.08457508479943954
VRLKGATT	8	Unmodified	_VRLKGATT_					0	0	0			REV__nc|ENSG00000171988|Q15652-3|JMJD1C	REV__nc|ENSG00000171988|Q15652-3|JMJD1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	845.520328	844.513051	2.7815	0.0023518	2.3133	0.001956	5.0948	0.0043078	845.5217516931795	106.22	0.12041	106.28	106.21	106.33	0.05455	-0.028564	0.00020672	NaN	0.69038	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	51798000	+		39877	11053	19619	19702							0.08457508479943954
VRLKHRKL	8	Unmodified	_VRLKHRKL_					0	0	0		SARNP-KCNN4|1|fusion;ENSG00000104783|ENST00000648319|KCNN4	SARNP-KCNN4|1|fusion	SARNP-KCNN4|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	351.2011291384697	3	350.573332	1048.69817	-1.9116	-0.00067014	-2.2716	-0.00079637	-4.1832	-0.0014665	350.5723937319712	24.483	0.6161	24.483	24.118	24.734	0					31	19	2	0	0	0	2.3239	1	10229	10229		0	0	1	354130			39878	1474	19620	19703	46255	46255					0.17576536070214388
VRLKKLDV	8	Unmodified	_VRLKKLDV_					0	0	0			REV__ENST00000482262.1_1_3:51425158-51426517:+|nuORF	REV__ENST00000482262.1_1_3:51425158-51426517:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	324.2175170779228	3	324.218443	969.633501	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.56	1	105.56	105.06	106.06	0								0	0	0	1.0178	1	44838	44838		0.40072	0	1		+		39879	10266	19621	19704	46256	46256					0.14746916473563942
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2619811892509	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.88	1	104.94	104.44	105.44	0.056801								0	0	0	0.42693	1	44342	44342		0	0	1				39880	6166	19622	19705	46257	46257					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2615844607353	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.98	1	105.04	104.54	105.54	0.056801								0	0	0	0.42693	1	44414	44414		0	0	1				39881	6166	19622	19705	46258	46258					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2613708376884	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.42	1	105.47	104.97	105.97	0.056801								0	0	0	0.42693	1	44689	44689		0	0	1				39882	6166	19622	19705	46259	46259					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614013552666	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.31	1	106.36	105.86	106.86	0.05455								0	0	0	0.42693	1	45270	45270		0	0	1				39883	6166	19622	19705	46260	46260					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614013552666	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.15	1	107.2	106.7	107.7	0.052452								0	0	0	0.42693	1	45782	45782		0	0	1				39884	6166	19622	19705	46261	46261					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2615234255791	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.28	1	107.33	106.83	107.83	0.052452								0	0	0	0.42693	1	45856	45856		0	0	1				39885	6166	19622	19705	46262	46262					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2608215212822	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.94	1	107.99	107.49	108.49	0.051201								0	0	0	0.42693	1	46303	46303		0	0	1				39886	6166	19622	19705	46263	46263					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2603332400322	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.07	1	108.12	107.62	108.62	0.050644								0	0	0	0.42693	1	46389	46389		0	0	1				39887	6166	19622	19705	46264	46264					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2610046267509	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.18	1	108.23	107.73	108.73	0.050644								0	0	0	0.42693	1	46458	46458		0	0	1				39888	6166	19622	19705	46265	46265					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614929080009	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.72	1	108.77	108.27	109.27	0.050644								0	0	0	0.42693	1	46782	46782		0	0	1				39889	6166	19622	19705	46266	46266					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2617065310478	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.82	1	108.87	108.37	109.37	0.050644								0	0	0	0.42693	1	46845	46845		0	0	1				39890	6166	19622	19705	46267	46267					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2617370486259	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.93	1	108.98	108.48	109.48	0.050644								0	0	0	0.42693	1	46914	46914		0	0	1				39891	6166	19622	19705	46268	46268					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2614929080009	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.06	1	109.11	108.61	109.61	0.050644								0	0	0	0.42693	1	46989	46989		0	0	1				39892	6166	19622	19705	46269	46269					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	371.2619811892509	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.31	1	109.35	108.85	109.85	0.048843								0	0	0	0.42693	1	47129	47129		0	0	1				39893	6166	19622	19705	46270	46270					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2611266970634	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.27	1	108.43	107.93	108.93	0.15795								0	0	0	0.42693	1	46704	46704		0	0	1				39894	6166	19622	19705	46271	46271					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2611877322197	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.86	1	109.01	108.51	109.51	0.1548								0	0	0	0.42693	1	47090	47090		0	0	1				39895	6166	19622	19705	46272	46272					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2618286013603	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.97	1	109.12	108.62	109.62	0.1548								0	0	0	0.42693	1	47159	47159		0	0	1				39896	6166	19622	19705	46273	46273					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2611877322197	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.21	1	109.36	108.86	109.86	0.1548								0	0	0	0.42693	1	47310	47310		0	0	1				39897	6166	19622	19705	46274	46274					0.20914842698675784
VRLKLQKKV	9	Unmodified	_VRLKLQKKV_					0	0	0		ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	ENST00000373980.8_1_10:52913078-53227515:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	371.2622863650322	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.39	1	109.55	109.05	110.05	0.1548								0	0	0	0.42693	1	47426	47426		0	0	1				39898	6166	19622	19705	46275	46275					0.20914842698675784
VRLLRLHIAL	10	Unmodified	_VRLLRLHIAL_					0	0	0		ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	ENST00000368408.3_1_1:155051524-155058895:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	602.4114868044853	2	602.40605	1202.79755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.51	1	105.68	105.18	106.18	0.16679								0	0	0	0.66237	1	44895	44895		0.45834	0.057624	1				39899	6084	19623	19706	46276	46276					0.20425933964315846
VRLPAPPL	8	Unmodified	_VRLPAPPL_					0	0	0			REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	431.7790405154228	2	431.779088	861.543623	3.2624	0.0014086	-3.234	-0.0013964	0.028385	1.2256E-05	431.77757074244977	106.2	0.14624	106.36	106.26	106.41	0.15781					18	7	3	0	0	0	0.88958	1	45415	45415		2.8892	0	1	37575000	+		39900	12323	19624	19707	46277	46277					0.10731286864995582
VRLPAPPL	8	Unmodified	_VRLPAPPL_					0	0	0			REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	431.779088	861.543623	0.59592	0.0002573	-0.74974	-0.00032372	-0.15382	-6.6416E-05	431.77845382448265	106.25	0.1133	106.25	106.19	106.31	0	-0.053102	0.0020808	NaN	2.8892	12	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7013900	+		39901	12323	19624	19707							0.10731286864995582
VRLPAPPL	8	Unmodified	_VRLPAPPL_					0	0	0			REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	431.779088	861.543623	3.1283	0.0013507	-3.1943	-0.0013792	-0.06603	-2.851E-05	431.77741478008545	106.22	0.099503	106.28	106.21	106.31	0.05455	-0.023435	-3.0205E-05	NaN	2.8892	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9717400	+		39902	12323	19624	19707							0.10731286864995582
VRLPAPPL	8	Unmodified	_VRLPAPPL_					0	0	0			REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	431.779088	861.543623	3.2624	0.0014086	-3.234	-0.0013964	0.028385	1.2256E-05	431.77757074244977	106.2	0.14624	106.36	106.26	106.41	0.15781	0.059255	-6.4466E-05	NaN	2.8892	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	37575000	+		39903	12323	19624	19707							0.10731286864995582
VRLPAPPL	8	Unmodified	_VRLPAPPL_					0	0	0			REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	REV__ENST00000302824.6_1_15:81605398-81605581:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	431.779088	861.543623	3.2999	0.0014248	-3.8949	-0.0016818	-0.59501	-0.00025691	431.77719995159237	106.16	0.16205	106.32	106.24	106.4	0.16174	0.017282	-0.00063523	NaN	2.8892	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31182000	+		39904	12323	19624	19707							0.10731286864995582
VRLPLLLII	9	Unmodified	_VRLPLLLII_					0	0	0			REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1049.751757800579	1	1049.74451	1048.73724	3.3008	0.003465	3.8661	0.0040585	7.167	0.0075235	1049.7490294648978	108.46	0.098686	108.51	108.42	108.52	0.050644					8	5	2	0	0	0	0.85403	1	46620	46620		0	0	1	21410000	+		39905	13153	19625	19708	46278	46278					0.21481823581234494
VRLPLLLII	9	Unmodified	_VRLPLLLII_					0	0	0			REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1049.74451	1048.73724	1.2749	0.0013383	8.3416	0.0087565	9.6164	0.010095	1049.7526519752569	108.45	0.16249	108.45	108.42	108.58	0	-0.029505	0.0020736	NaN	0	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8932500	+		39906	13153	19625	19708							0.21481823581234494
VRLPLLLII	9	Unmodified	_VRLPLLLII_					0	0	0			REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	REV__ENST00000454079.5_1_3:50004874-50005063:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1049.74451	1048.73724	3.3008	0.003465	3.8661	0.0040585	7.167	0.0075235	1049.7490294648978	108.46	0.098686	108.51	108.42	108.52	0.050644	0.029505	-0.0026245	NaN	0	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21410000	+		39907	13153	19625	19708							0.21481823581234494
VRLQKKQAER	10	Unmodified	_VRLQKKQAER_					0	0	0		nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47;ENSG00000165164|ENST00000378653|CFAP47	nc|ENSG00000165164|Q6ZTR5-2|CFAP47	nc|ENSG00000165164|Q6ZTR5-2|CFAP47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3837768435478	2	628.383303	1254.75205	2.3591	0.0014824	-1.133	-0.00071193	1.2261	0.00077046	628.3824644183575	78.414	1.253	79.681	79	80.253	1.2668					113	40	4	0	0	0	0.88314	1	32972	32972		3.2813	0.54611	1	7119900			39908	3818	19626	19709	46279	46279					0.13486663711250912
VRLQKKQAER	10	Unmodified	_VRLQKKQAER_					0	0	0		nc|ENSG00000165164|Q6ZTR5-2|CFAP47;nc|ENSG00000165164|Q6ZTR5-1|CFAP47;nc|ENSG00000165164|Q6ZTR5-6|CFAP47;ENSG00000165164|ENST00000378653|CFAP47	nc|ENSG00000165164|Q6ZTR5-2|CFAP47	nc|ENSG00000165164|Q6ZTR5-2|CFAP47	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3837158083916	2	628.383303	1254.75205	1.2793	0.0008039	-0.45253	-0.00028436	0.82678	0.00051954	628.3828116438597	78.132	1.2643	79.884	79.041	80.305	1.7514					105	40	4	0	0	0	0.88579	1	32763	32763		2.9952	0	1	6175000			39909	3818	19626	19709	46280	46280					0.13486663711250912
VRLRLLIP	8	Unmodified	_VRLRLLIP_					0	0	0			REV__ENST00000500009.2_1_4:89206113-89206143:+|nuORF	REV__ENST00000500009.2_1_4:89206113-89206143:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	327.2298766970634	3	327.230683	978.67022	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.807	1	96.807	96.307	97.307	0								0	0	0	1.0178	1	40471	40471		0.45834	0	1		+		39910	13502	19627	19710	46281	46281					0.18003213090128156
VRMGSHRG	8	Unmodified	_VRMGSHRG_					0	0	0		ENST00000471212.5_1_9:35684677-35685031:-|nuORF	ENST00000471212.5_1_9:35684677-35685031:-|nuORF	ENST00000471212.5_1_9:35684677-35685031:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	450.2366210818291	2	450.235053	898.455553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.26	1	100.44	99.94	100.94	0.18047								0	0	0	1.0178	1	42194	42194		2.3027	1.5091	1				39911	6738	19628	19711	46282	46282					0.0022634300273693952
VRMKALTVKK	10	Unmodified	_VRMKALTVKK_					0	0	0			REV__ENSG00000158717|ENST00000312838|RNF166	REV__ENSG00000158717|ENST00000312838|RNF166	MSMS	GG20161007_CRH_Patient100_A02_01	1	587.3792602419853	2	587.378643	1172.74273	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.77	1	119.77	119.27	120.27	0								0	0	0	0.6624	1	51570	51570		0.40072	0	1		+		39912	10561	19629	19712	46283	46283					0.16327179101381262
VRNALIEDA	9	Unmodified	_VRNALIEDA_					0	0	0			REV__tr|A0A553SK03|A0A553SK03_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SK03|A0A553SK03_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	334.1842529177666	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.647	1	16.474	15.974	16.974	0.82643								0	0	0	0.42693	1	6503	6503		1.0715	0.61312	1		+		39913	14926	19630	19713	46284	46284					0.03512268437839339
VRNALIEDA	9	Unmodified	_VRNALIEDA_					0	0	0			REV__tr|A0A553SK03|A0A553SK03_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SK03|A0A553SK03_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	334.1855651736259	3	334.185579	999.534909	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.855	1	16.894	16.394	17.394	1.0392								0	0	0	0.42693	1	6580	6580		1.0715	0	1		+		39914	14926	19630	19713	46285	46285					0.03512268437839339
VRNILQLQPY	10	Unmodified	_VRNILQLQPY_					0	0	0		ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	415.2437011599541	3	415.243429	1242.70846	0.055467	2.3032E-05	1.6485	0.00068453	1.704	0.00070756	415.2439471919378	27.351	0.42428	27.351	27.107	27.532	0					32	13	3	0	0	0	0.85617	1	11475	11475		6.1918	2.0752	1	2145100			39915	1781	19631	19714	46286	46286					0.09681054214138385
VRNILQLQPY	10	Unmodified	_VRNILQLQPY_					0	0	0		ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2440368533134	3	415.243429	1242.70846	1.1216	0.00046573	0.45508	0.00018897	1.5766	0.00065469	415.2434754947213	25.558	0.58163	26.817	26.468	27.049	1.2594					50	18	5	0	0	0	0.8251	1	10718	10718		9.544	0.56773	1	5772500			39916	1781	19631	19714	46287	46287					0.09681054214138385
VRNILQLQPY	10	Unmodified	_VRNILQLQPY_					0	0	0		ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	415.2442809939384	3	415.243429	1242.70846	0.57489	0.00023872	2.0396	0.00084693	2.6145	0.0010856	415.2444892964756	25.161	0.60687	26.878	26.482	27.089	1.7167					48	19	3	0	0	0	0.83036	1	10529	10529		8.9762	1.4992	1	3984400			39917	1781	19631	19714	46288	46288					0.09681054214138385
VRNILQLQPY	10	Unmodified	_VRNILQLQPY_					0	0	0		ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	ENSG00000112365|ENST00000230122|ZBTB24	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	415.243429	1242.70846	1.1768	0.00048867	-0.31999	-0.00013287	0.85685	0.0003558	415.243420004266	26.738	0.39894	27	26.772	27.171	0.26173	-0.011491	-0.0016515	NaN	9.544	30	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1390300			39918	1781	19631	19714							0.09681054214138385
VRNNKHRK	8	Unmodified	_VRNNKHRK_					0	0	0			REV__BRD1|p.P391Qfs*8|1|0.86|ENSG00000100425|chr22:49823148-49823148|A/-|frameshift_variant	REV__BRD1|p.P391Qfs*8|1|0.86|ENSG00000100425|chr22:49823148-49823148|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2136718630791	3	351.212574	1050.61589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.134	1	53.457	52.957	53.957	0.32283								0	0	0	1.0178	1	22258	22258		0.40072	0	1		+		39919	8171	19632	19715	46289	46289					0.09261013991272193
VRPAAAGL	8	Unmodified	_VRPAAAGL_					0	0	0			REV__ENSG00000111331|ENST00000228928|OAS3	REV__ENSG00000111331|ENST00000228928|OAS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	754.4585449099541	1	754.456999	753.449723	2.7378	0.0020655	-0.88664	-0.00066893	1.8511	0.0013966	754.4560217061065	104.4	0.11143	104.57	104.5	104.62	0.1731					10	5	2	0	0	0	0.89176	1	44149	44149		0.79363	0	1	196240000	+		39920	9323	19633	19716	46290	46290					0.06313567762697403
VRPCLKKI	8	Unmodified	_VRPCLKKI_					0	0	0		nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	320.0555297732353	3	319.54064	955.600092	0.10172	3.2505E-05	0.20961	6.698E-05	0.31134	9.9485E-05	319.5406394101026	23.51	0.68131	23.743	23.536	24.218	0.23306					35	21	2	0	0	0	2.3239	1	9761	9761		0	0	1	512550			39921	7906	19634	19717	46291	46291					0.12051591430019926
VRPCLKKI	8	Unmodified	_VRPCLKKI_					0	0	0		nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	319.54064	955.600092	-0.093826	-2.9981E-05	-0.21484	-6.8649E-05	-0.30866	-9.8631E-05	319.54071766976693	22.607	0.74188	23.822	23.298	24.04	1.2145	0.15747	-0.00015883	NaN	0	43	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	577840			39922	7906	19634	19717							0.12051591430019926
VRPCLKKI	8	Unmodified	_VRPCLKKI_					0	0	0		nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	nc|ENSG00000162493|Q86YL7-2|PDPN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	319.54064	955.600092	-0.15965	-5.1014E-05	-0.16067	-5.1339E-05	-0.32031	-0.00010235	319.54061351419676	21.812	0.71848	23.428	23.293	24.011	1.6158	-0.23626	-0.0001069	NaN	0	47	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	631970			39923	7906	19634	19717							0.12051591430019926
VRPEKRVRRPG	11	Unmodified	_VRPEKRVRRPG_					0	0	0			REV__SLAMF6|p.V247Efs*53|1|0.17|ENSG00000162739|chr1:160490588-160490592|CAAAA/-|frameshift_variant	REV__SLAMF6|p.V247Efs*53|1|0.17|ENSG00000162739|chr1:160490588-160490592|CAAAA/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	338.9706909060478	4	338.211373	1348.81638	0.75051	0.00025383	4.2986	0.0014538	5.0491	0.0017077	338.2125526957505	32.547	0.21194	32.841	32.685	32.897	0.29431					10	6	2	0	0	0	0.14606	1	13631	13631		1.2148	1.0749	1	1177800	+		39924	14621	19635	19718	46292	46292					0.15592863588062755
VRPERKKLPRR	11	Unmodified	_VRPERKKLPRR_					0	0	0		ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.4833251833916	4	359.48366	1433.90553	-1.3554	-0.00048724	0.4002	0.00014387	-0.9552	-0.00034338	359.4837626090117	31.334	2.3411	31.334	30.039	32.38	0					164	75	4	0	0	0	1.039	1	13287	13287		0.45452	0.046251	1	27624000			39925	6840	19636	19719	46293	46293					0.20593698547577333
VRPERKKLPRR	11	Unmodified	_VRPERKKLPRR_					0	0	0		ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	359.7343017458916	4	359.48366	1433.90553	-1.2357	-0.0004442	0.51284	0.00018436	-0.72282	-0.00025984	359.4832635198668	34.499	1.0096	34.499	34.008	35.018	0					50	32	2	0	0	0	1.039	1	14459	14459		0.45452	0.35968	1	1107700			39926	6840	19636	19719	46294	46294					0.20593698547577333
VRPERKKLPRR	11	Unmodified	_VRPERKKLPRR_					0	0	0		ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	359.4836913943291	4	359.48366	1433.90553	-0.50274	-0.00018073	-0.29737	-0.0001069	-0.80011	-0.00028763	359.48328246291413	31.253	0.65182	32.534	32.151	32.803	1.2813					43	20	3	0	0	0	1.0402	1	13047	13047		0.08335	0	1	917760			39927	6840	19636	19719	46295	46295					0.20593698547577333
VRPERKKLPRR	11	Unmodified	_VRPERKKLPRR_					0	0	0		ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	ENST00000483405.5_2_16:29911961-29916194:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	359.48366	1433.90553	0.44753	0.00016088	-3.407	-0.0012247	-2.9594	-0.0010639	359.4817929996584	32.429	0.27358	34.254	34.092	34.366	1.8246	-0.12269	-0.0043107	NaN	0.45452	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	449620			39928	6840	19636	19719							0.20593698547577333
VRPHFPIYL	9	Unmodified	_VRPHFPIYL_					0	0	0		ENST00000306353.7_2_2:85829070-85829145:-|nuORF	ENST00000306353.7_2_2:85829070-85829145:-|nuORF	ENST00000306353.7_2_2:85829070-85829145:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.3317748904228	2	571.329476	1140.6444	2.2647	0.0012939	1.2597	0.00071969	3.5244	0.0020136	571.3299637942055	88.422	0.45456	88.422	88.119	88.574	0					34	14	3	0	0	0	0.84963	1	36915	36915		0.6015	0	1	2661300			39929	5778	19637	19720	46296	46296					0.07970318847856106
VRPHRIVG	8	Unmodified	_VRPHRIVG_					0	0	0			REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	933.5756713747978	1	933.574094	932.566818	2.7958	0.0026101	0.080216	7.4888E-05	2.876	0.002685	933.5734721729109	106.16	0.12257	106.21	106.15	106.27	0.05455					14	5	3	0	0	0	0.89198	1	45182	45182		0	0	1	24540000	+		39930	13533	19638	19721	46297	46297					0.09783725702334323
VRPHRIVG	8	Unmodified	_VRPHRIVG_					0	0	0			REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	933.574094	932.566818	1.1486	0.0010723	2.7491	0.0025665	3.8978	0.0036389	933.5759861726116	106.21	0.13104	106.21	106.13	106.26	0	-0.00039412	0.00075171	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22782000	+		39931	13533	19638	19721							0.09783725702334323
VRPHRIVG	8	Unmodified	_VRPHRIVG_					0	0	0			REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	REV__ENST00000505654.1_2_5:102201533-102201608:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	933.574094	932.566818	2.7958	0.0026101	0.080216	7.4888E-05	2.876	0.002685	933.5734721729109	106.16	0.12257	106.21	106.15	106.27	0.05455	0.00039412	-0.0017399	NaN	0	14	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24540000	+		39932	13533	19638	19721							0.09783725702334323
VRPLPKLRL	9	Unmodified	_VRPLPKLRL_					0	0	0			REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	REV__ENST00000536411.1_1_12:6483977-6484974:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.3765136599541	2	546.374218	1090.73388	2.745	0.0014998	-0.57556	-0.00031447	2.1694	0.0011853	546.3742747659753	109.34	0.38193	109.39	109.27	109.65	0.048843					30	15	3	0	0	0	0.85403	1	47136	47136		0	0	1	9320000	+		39933	13752	19639	19722	46298	46298					0.19214573527210632
VRPRLASI	8	Unmodified	_VRPRLASI_					0	0	0		nc|ENSG00000163645|Q7L0X2-2|ERICH6;ENSG00000163645|ENST00000295910|ERICH6	nc|ENSG00000163645|Q7L0X2-2|ERICH6	nc|ENSG00000163645|Q7L0X2-2|ERICH6	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.2963744997978	2	456.292894	910.571235	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.05	1	103.05	102.55	103.55	0								0	0	0	1.0178	1	43206	43206		2.3027	0	1				39934	3708	19640	19723	46299	46299					0.11237190125223151
VRPRRLHRLRL	11	Unmodified	_VRPRRLHRLRL_					0	0	0			REV__ENSG00000184574|ENST00000329858|LPAR5	REV__ENSG00000184574|ENST00000329858|LPAR5	MSMS	GG20161007_CRH_Patient100_W632_02	4	491.3239929080009	3	491.32341	1470.9484	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.113	1	99.339	98.839	99.839	0.22545								0	0	0	0.63775	1	41705	41705		0.094841	0.094841	1		+		39935	11428	19641	19724	46300	46300					0.23176513395674192
VRPRRRIYI	9	Unmodified	_VRPRRRIYI_					0	0	0			REV__ENST00000480655.5_1_20:34262894-34263203:-|nuORF	REV__ENST00000480655.5_1_20:34262894-34263203:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2623779177666	3	410.263157	1227.76764	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.76	1	70.76	70.26	71.26	0								0	0	0	0.42693	1	29473	29473		0.26902	0	1		+		39936	11937	19642	19725	46301	46301					0.1628699501900428
VRPVLLAT	8	Unmodified	_VRPVLLAT_					0	0	0			REV__chr7:94409608-94410242|90|90.0|0.04|11.21|+|1|COL1A2,COL1A2|1	REV__chr7:94409608-94410242|90|90.0|0.04|11.21|+|1|COL1A2,COL1A2|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	868.5635253787041	1	868.561464	867.554188	2.7951	0.0024277	0.72413	0.00062895	3.5192	0.0030567	868.5622581051789	109.34	0.2869	109.39	109.27	109.55	0.048843					27	11	3	0	0	0	0.89178	1	47131	47131		0.69038	0	1	26064000	+		39937	8340	19643	19726	46302	46302					0.11511269519428424
VRPVLLAT	8	Unmodified	_VRPVLLAT_					0	0	0			REV__chr7:94409608-94410242|90|90.0|0.04|11.21|+|1|COL1A2,COL1A2|1	REV__chr7:94409608-94410242|90|90.0|0.04|11.21|+|1|COL1A2,COL1A2|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	868.5644409060478	1	868.561464	867.554188	3.1273	0.0027163	0.97777	0.00084925	4.1051	0.0035655	868.5621421294546	109.32	0.34437	109.48	109.3	109.65	0.1548					50	15	5	0	0	0	0.89178	1	47382	47382		0.69038	0	1	241280000	+		39938	8340	19643	19726	46303	46303					0.11511269519428424
VRPVRAGR	8	Unmodified	_VRPVRAGR_					0	0	0			REV__ENST00000297109.10_1_5:153825644-153830670:+|nuORF	REV__ENST00000297109.10_1_5:153825644-153830670:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1927673220634	3	304.194632	909.562067	-2.7131	-0.00082531	-3.4854	-0.0010602	-6.1984	-0.0018855	304.1937520320178	30.541	0.61118	30.541	30.131	30.742	0					35	19	3	0	0	0	0.89051	1	12794	12794		1.4819	0	1	8322800	+		39939	12300	19644	19727	46304	46304					0.1036684155956209
VRPVVKIL	8	Unmodified	_VRPVVKIL_					0	0	0			REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	REV__ENST00000481860.6_1_11:119043673-119051967:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.2073547244072	3	308.551534	922.632772	1.3733	0.00042372	4.2458	0.0013101	5.6191	0.0017338	308.5532843402466	77.09	0.18845	77.407	77.323	77.511	0.31653					7	5	2	0	0	0	2.3239	1	32269	32269		0	0	1	418700	+		39940	10607	19645	19728	46305	46305					0.16836121824519523
VRQGGRIT	8	Unmodified	_VRQGGRIT_					0	0	0			REV__tr|A0A7D7ACB0|A0A7D7ACB0_9CLOTProbableseptumsite-determiningproteinMinCOS=ClostridiumintestinaleOX=36845GN=minCPE=3SV=1	REV__tr|A0A7D7ACB0|A0A7D7ACB0_9CLOTProbableseptumsite-determiningproteinMinCOS=ClostridiumintestinaleOX=36845GN=minCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7654296755791	2	443.764501	885.514448	3.1071	0.0013788	-0.78716	-0.00034931	2.3199	0.0010295	443.764070847025	74.742	0.65372	75.066	74.74	75.393	0.32464					54	20	4	0	0	0	0.89178	1	31289	31289		0.69038	0	1	21147000	+		39941	15900	19646	19729	46306	46306					0.0671114256869032
VRQHVILQS	9	Unmodified	_VRQHVILQS_					0	0	0			REV__ENSG00000196345|ENST00000426540|ZKSCAN7	REV__ENSG00000196345|ENST00000426540|ZKSCAN7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	360.2016479372978	3	360.548852	1078.62473	-1.55	-0.00055885	0.58842	0.00021216	-0.96158	-0.0003467	360.549156787515	11.175	0.56289	11.844	11.639	12.202	0.66934					23	17	2	0	0	0	0.11909	1	4776	4776		2.4985	0	1	686400	+		39942	11628	19647	19730	46307	46307					0.08855942837112707
VRQHVILQS	9	Unmodified	_VRQHVILQS_					0	0	0			REV__ENSG00000196345|ENST00000426540|ZKSCAN7	REV__ENSG00000196345|ENST00000426540|ZKSCAN7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	360.2014343142509	3	360.548852	1078.62473	-0.33892	-0.0001222	0.051994	1.8746E-05	-0.28693	-0.00010345	360.5487906957571	10.998	0.26489	11.76	11.615	11.88	0.76165					15	8	2	0	0	0	0.11909	1	4594	4594		2.4985	0	1	389230	+		39943	11628	19647	19730	46308	46308					0.08855942837112707
VRQQLQPQ	8	Unmodified	_VRQQLQPQ_					0	0	0		ENST00000247930.4_1_7:149129383-149129452:-|nuORF	ENST00000247930.4_1_7:149129383-149129452:-|nuORF	ENST00000247930.4_1_7:149129383-149129452:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7826110720634	2	498.78289	995.551228	1.6898	0.00084283	-1.7664	-0.00088103	-0.076593	-3.8203E-05	498.78226448245846	80.401	0.31546	80.401	80.257	80.572	0					12	9	2	0	0	0	0.89051	1	33489	33489		2.3027	0	1	686030			39944	5578	19648	19731	46309	46309					0.053273943946123836
VRRALARA	8	Unmodified	_VRRALARA_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2484008669853	3	304.866515	911.577717	-2.9073	-0.00088632	-2.3889	-0.0007283	-5.2962	-0.0016146	304.8660231494641	26.2	0.57563	26.2	25.841	26.417	0					42	18	3	0	0	0	2.3239	1	11008	11008		0	0	1	1599200			39945	3775	19649	19732	46310	46310					0.11839128076587713
VRRALARA	8	Unmodified	_VRRALARA_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.2482482790947	3	304.866515	911.577717	0.29856	9.1021E-05	-3.8562	-0.0011756	-3.5576	-0.0010846	304.8656871245175	27.529	0.24713	27.801	27.648	27.895	0.27119					19	7	3	0	0	0	2.3239	1	11448	11448		0	0	1	1350700			39946	3775	19649	19732	46311	46311					0.11839128076587713
VRRALARA	8	Unmodified	_VRRALARA_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	304.866515	911.577717	-0.046201	-1.4085E-05	-4.2799	-0.0013048	-4.3261	-0.0013189	304.86521516351183	26.415	0.40336	27.686	27.498	27.901	1.2715	-0.048083	0.00046728	NaN	0	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2277200			39947	3775	19649	19732							0.11839128076587713
VRRALARA	8	Unmodified	_VRRALARA_					0	0	0		nc|ENSG00000164403|Q2M3G4-2|SHROOM1;ENSG00000164403|ENST00000378679|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	nc|ENSG00000164403|Q2M3G4-2|SHROOM1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	304.866515	911.577717	-0.028372	-8.6497E-06	-5.4676	-0.0016669	-5.496	-0.0016756	304.8648134259415	25.999	0.27041	27.716	27.523	27.793	1.7167	-0.018442	-0.000619	NaN	0	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2952700			39948	3775	19649	19732							0.11839128076587713
VRRGGSKI	8	Unmodified	_VRRGGSKI_					0	0	0			REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	REV__nc|ENSG00000187391|Q86UL8-2|MAGI2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	436.7765685915947	2	436.774868	871.535184	2.8249	0.0012339	0.18781	8.2029E-05	3.0127	0.0013159	436.7747897649355	72.328	1.0203	73.658	73.361	74.381	1.3297					100	32	6	0	0	0	0.89178	1	30266	30266		0.69038	0	1	160180000	+		39949	11532	19650	19733	46312	46312					0.09427732948381617
VRRGVAPV	8	Unmodified	_VRRGVAPV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000120539|Q96GX5-2|MASTL	ENSG00000120539|ENST00000375940|MASTL	ENSG00000120539|ENST00000375940|MASTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	427.2714721560478	2	427.271961	852.52937	4.2186	0.0018025	-4.1927	-0.0017914	0.025834	1.1038E-05	427.2697170206808	93.818	0.38294	94.689	94.481	94.864	0.87176					20	11	2	0	0	0	0.89008	1	39487	39487		2.5775	0	1	1240600			39950	2108	19651	19734	46313	46313					0.09720634436700948
VRRGVAPV	8	Unmodified	_VRRGVAPV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000120539|Q96GX5-2|MASTL	ENSG00000120539|ENST00000375940|MASTL	ENSG00000120539|ENST00000375940|MASTL	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	427.271961	852.52937	3.2923	0.0014067	-3.4425	-0.0014709	-0.15018	-6.4166E-05	427.27041696892667	93.256	0.34933	94.533	94.323	94.673	1.277	-0.078249	0.00025442	NaN	2.5775	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1007600			39951	2108	19651	19734							0.09720634436700948
VRRGVLEE	8	Unmodified	_VRRGVLEE_					0	0	0			REV__tr|A0A553SHI8|A0A553SHI8_NIACIMethionine--tRNAligaseOS=NialliacirculansOX=1397GN=metGPE=3SV=1	REV__tr|A0A553SHI8|A0A553SHI8_NIACIMethionine--tRNAligaseOS=NialliacirculansOX=1397GN=metGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.2784911990166	2	479.277441	956.540328	2.5713	0.0012324	-0.92607	-0.00044385	1.6453	0.00078854	479.27720759044763	79.452	0.75487	79.753	79.217	79.972	0.30046					45	23	3	0	0	0	0.89051	1	33191	33191		2.3027	0	1	1958700	+		39952	14799	19652	19735	46314	46314					0.06031992020314192
VRRILIPHLF	10	Unmodified	_VRRILIPHLF_					0	0	0		tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.4086791872978	2	632.40605	1262.79755	2.8592	0.0018082	0.25453	0.00016097	3.1138	0.0019692	632.4058919914958	107.34	0.18626	107.5	107.38	107.56	0.15781					30	9	4	0	0	0	0.89803	1	46178	46178		0	0	1	166720000			39953	16335	19653	19736	46315	46315					0.1766593396432654
VRRILIPHLF	10	Unmodified	_VRRILIPHLF_					0	0	0		tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	632.40605	1262.79755	1.5259	0.00096496	1.9259	0.0012179	3.4517	0.0021829	632.4072730513733	107.38	0.14462	107.38	107.29	107.43	0	-0.064735	0.00083998	NaN	0	17	6	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	28786000			39954	16335	19653	19736							0.1766593396432654
VRRILIPHLF	10	Unmodified	_VRRILIPHLF_					0	0	0		tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	tr|A0A553SLK3|A0A553SLK3_NIACIHDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20690PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	632.40605	1262.79755	2.6561	0.0016797	1.7174	0.0010861	4.3735	0.0027658	632.4065935117195	107.35	0.14922	107.41	107.31	107.46	0.052452	-0.036616	0.00057633	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20321000			39955	16335	19653	19736							0.1766593396432654
VRRLLLGK	8	Unmodified	_VRRLLLGK_					0	0	0		nc|ENSG00000104044|Q04671-3|OCA2;nc|ENSG00000104044|Q04671-2|OCA2;ENSG00000104044|ENST00000354638|OCA2	nc|ENSG00000104044|Q04671-3|OCA2	nc|ENSG00000104044|Q04671-3|OCA2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.2074767947197	2	477.832186	953.649819	1.5727	0.00075149	0.16054	7.671E-05	1.7332	0.0008282	477.8321060297929	103.98	0.11154	103.98	103.93	104.05	0					9	5	2	0	0	0	2.3239	1	43834	43834		0	0	1	2658000			39956	1447	19654	19737	46316	46316					0.1711404243034167
VRRLPGGG	8	Unmodified	_VRRLPGGG_					0	0	0		ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2489501833916	2	406.248486	810.48242	0.23794	9.6662E-05	0.20758	8.4328E-05	0.44552	0.00018099	406.24858817811304	70.461	1.1698	70.461	69.866	71.035	0					103	37	5	0	0	0	0.89198	3	29309	29309;29359;29412		0	0	1	372410000			39957	6963	19655	19738	46317;46318;46319	46317					0.06959774885581282
VRRLPGGG	8	Unmodified	_VRRLPGGG_					0	0	0		ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	ENST00000497505.5_1_2:203879615-203880929:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.2488586306572	2	406.248486	810.48242	1.1635	0.00047267	0.39782	0.00016161	1.5613	0.00063428	406.2485207401386	68.962	0.98308	70.815	70.468	71.451	1.853					90	31	5	0	0	0	0.89198	2	28910	28910;28949		0	0	1	95586000			39958	6963	19655	19738	46320;46321	46320					0.06959774885581282
VRRLPRALV	9	Unmodified	_VRRLPRALV_					0	0	0			REV__ENST00000563255.1_1_16:65157767-65158064:-|nuORF	REV__ENST00000563255.1_1_16:65157767-65158064:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3598510622978	2	540.361642	1078.70873	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.22	1	21.794	21.294	22.294	1.5748								0	0	0	0.42693	1	8408	8408		0	0	1		+		39959	13913	19656	19739	46322	46322					0.17252518724649235
VRRLQGVL	8	Unmodified	_VRRLQGVL_					0	0	0		ENSG00000124587|ENST00000304611|PEX6;nc|ENSG00000124587|Q13608-3|PEX6;nc|ENSG00000124587|Q13608-2|PEX6	ENSG00000124587|ENST00000304611|PEX6	ENSG00000124587|ENST00000304611|PEX6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	470.2041808962822	2	470.806168	939.597784	1.7073	0.00080383	0.92885	0.00043731	2.6362	0.0012411	470.80626900199763	101.5	0.1499	101.5	101.41	101.56	0					8	4	3	0	0	0	2.3239	1	42527	42527		0	0	1	2065400			39960	2235	19657	19740	46323	46323					0.12556879016574385
VRRLQIKLPVL	11	Unmodified	_VRRLQIKLPVL_					0	0	0			REV__ENSG00000079393|ENST00000478873|DUSP13	REV__ENSG00000079393|ENST00000478873|DUSP13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1203185915947	3	445.638001	1333.89217	0.68347	0.00030458	-3.4524	-0.0015385	-2.7689	-0.0012339	445.6363658166702	23.128	0.21435	24.779	24.716	24.93	1.6511					8	6	2	0	0	0	0.14606	1	9679	9679		0.08335	0.08335	1	515390	+		39961	8799	19658	19741	46324	46324					0.2385844771565644
VRRLQIKLPVL	11	Unmodified	_VRRLQIKLPVL_					0	0	0			REV__ENSG00000079393|ENST00000478873|DUSP13	REV__ENSG00000079393|ENST00000478873|DUSP13	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1201354861259	3	445.638001	1333.89217	0.61592	0.00027448	-2.3529	-0.0010485	-1.737	-0.00077406	445.6368595653248	21.479	0.36242	23.095	22.931	23.293	1.6158					13	11	2	0	0	0	0.14606	1	8946	8946		0.08335	0.08335	1	407290	+		39962	8799	19658	19741	46325	46325					0.2385844771565644
VRRLVQGK	8	Unmodified	_VRRLVQGK_					0	0	0			REV__ENST00000585047.5_1_17:38218205-38233770:+|nuORF	REV__ENST00000585047.5_1_17:38218205-38233770:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	478.3138915896416	2	478.311618	954.608683	3.257	0.0015579	1.3572	0.00064918	4.6143	0.0022071	478.31235411258183	107.64	0.29734	107.8	107.66	107.96	0.15796					58	15	6	0	0	0	0.89198	2	46245	46245;46315		0	0	1	6249999999.999999	+		39963	13987	19659	19742	46326;46327	46326					0.12956281390859203
VRRNRKAEKR	10	Unmodified	_VRRNRKAEKR_					0	0	0			REV__ENST00000439964.1_1_2:64871847-64873778:+|nuORF	REV__ENST00000439964.1_1_2:64871847-64873778:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2733032107353	3	438.272604	1311.79598	1.1777	0.00051617	-0.45333	-0.00019868	0.7244	0.00031749	438.27229773511937	95.932	0.31647	95.932	95.746	96.063	0					37	10	5	0	0	0	0.89803	1	40071	40071		1.5923	1.1378	1	57924000	+		39964	13077	19660	19743	46328	46328					0.15255692928235476
VRRNRKAEKR	10	Unmodified	_VRRNRKAEKR_					0	0	0			REV__ENST00000439964.1_1_2:64871847-64873778:+|nuORF	REV__ENST00000439964.1_1_2:64871847-64873778:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	438.272604	1311.79598	1.1777	0.00051617	-0.45333	-0.00019868	0.7244	0.00031749	438.27229773511937	95.932	0.31647	95.932	95.746	96.063	0	-0.01304	0.00048011	NaN	1.5923	37	10	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	57924000	+		39965	13077	19660	19743							0.15255692928235476
VRRPKKVKRRK	11	Unmodified	_VRRPKKVKRRK_					0	0	0		ENSG00000135540|ENST00000343505|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	ENSG00000135540|ENST00000343505|NHSL1	MSMS	GG20161007_CRH_Patient100_W632_01	3	725.6393920779228	2	725.999503	1449.98445	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.9	1	102.07	101.57	102.57	0.17032								0	0	0	0.63775	1	42877	42877		0	0	1				39966	2673	19661	19744	46329	46329					0.2774597057250503
VRRPRRGGGV	10	Unmodified	_VRRPRRGGGV_					0	0	0			REV__ENST00000568194.5_1_16:2255763-2255901:+|nuORF	REV__ENST00000568194.5_1_16:2255763-2255901:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1109.681201159954	1	1109.67627	1108.66899	3.2752	0.0036344	0.81475	0.00090411	4.09	0.0045385	1109.6766398980817	107.51	0.17638	107.67	107.54	107.72	0.15795					22	8	3	0	0	0	0.89803	1	46181	46181		0	0	1	120280000	+		39967	13947	19662	19745	46330	46330					0.11900391773951924
VRRPSRLRQGV	11	Unmodified	_VRRPSRLRQGV_					0	0	0			REV__chr7:75484319-75485864|96|15.96|0.25|5.97|-|0|None,POM121C|1	REV__chr7:75484319-75485864|96|15.96|0.25|5.97|-|0|None,POM121C|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	331.7072021365166	4	331.70746	1322.80073	-1.6841	-0.00055862	0.91323	0.00030293	-0.77085	-0.0002557	331.7077939016305	45.636	0.79131	45.636	45.312	46.103	0					46	24	2	0	0	0	1.0365	1	19075	19075		1.2148	0	1	4433400	+		39968	8339	19663	19746	46331	46331					0.1522457707101239
VRRRLPRGR	9	Unmodified	_VRRRLPRGR_					0	0	0		ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.2542297244072	3	389.254885	1164.74283	-0.46337	-0.00018037	-1.1394	-0.00044352	-1.6028	-0.0006239	389.2544729304479	32.333	0.92141	32.333	32.164	33.086	0					98	29	5	0	0	0	0.8523	1	13521	13521		0.23584	0	1	66112000			39969	5540	19664	19747	46332	46332					0.16704359936261426
VRRRLPRGR	9	Unmodified	_VRRRLPRGR_					0	0	0		ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3785278201103	2	583.378689	1164.74283	0.9508	0.00055468	-1.6015	-0.00093427	-0.65068	-0.00037959	583.3776243171152	28.839	0.51639	29.119	28.894	29.41	0.2793					40	16	3	0	0	0	0.847	1	12139	12139		1.8442	0	1	6566700			39970	5540	19664	19747	46333	46333					0.16704359936261426
VRRRLPRGR	9	Unmodified	_VRRRLPRGR_					0	0	0		ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	583.3782226443291	2	583.378689	1164.74283	1.1075	0.00064612	-1.8492	-0.0010788	-0.74168	-0.00043268	583.3772629652059	31.799	0.45944	32.09	31.753	32.212	0.29086					19	14	2	0	0	0	0.8523	1	13349	13349		0.52476	0	1	1054000			39971	5540	19664	19747	46334	46334					0.16704359936261426
VRRRLPRGR	9	Unmodified	_VRRRLPRGR_					0	0	0		ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	ENST00000227507.2_1_11:69467885-69468137:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3775512576103	2	583.378689	1164.74283	0.632	0.0003687	-1.809	-0.0010553	-1.177	-0.00068664	583.3775741063457	27.124	0.71151	28.871	28.524	29.235	1.747					49	22	3	0	0	0	0.8523	1	11349	11349		0.52476	0	1	4237900			39972	5540	19664	19747	46335	46335					0.16704359936261426
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	759.4972411990166	2	759.49545	1516.97635	2.7311	0.0020742	0.82511	0.00062667	3.5562	0.0027009	759.4953507889506	105.77	0.11986	105.83	105.76	105.88	0.05455					15	5	4	0	0	0	1.0405	1	44935	44935		0	0	1	36174000	+		39973	12557	19665	19748	46336	46336					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	304.5369750857353	5	304.402546	1516.97635	0.3696	0.00011251	-1.1763	-0.00035806	-0.80668	-0.00024556	304.6028699180593	28.853	0.12142	29.133	29.045	29.166	0.27929					5	3	2	0	0	0	0.14606	1	12076	12076		0	0	1	162830	+		39974	12557	19665	19748	46337	46337					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	759.9998046755791	2	759.49545	1516.97635	2.5034	0.0019013	0.64056	0.0004865	3.1439	0.0023878	759.4955279773257	105.76	0.14832	105.91	105.83	105.98	0.15859					27	7	5	0	0	0	1.0405	1	45103	45103		0	0	1	137940000	+		39975	12557	19665	19748	46338	46338					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.0024597048759	3	506.666059	1516.97635	3.4435	0.0017447	0.45413	0.00023009	3.8976	0.0019748	506.6668472684119	105.75	0.14832	105.91	105.83	105.98	0.15859					18	7	3	0	0	0	1.0405	1	45116	45116		0	0	1	36752000	+		39976	12557	19665	19748	46339	46339					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	759.4969360232353	2	759.49545	1516.97635	2.5024	0.0019006	-0.036452	-2.7685E-05	2.4659	0.0018729	759.4950199063454	107.13	0.22508	107.29	107.19	107.41	0.15781					22	10	3	0	0	0	1.0405	1	45995	45995		0	0	1	62698000	+		39977	12557	19665	19748	46340	46340					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.2488281130791	5	304.402546	1516.97635	2.2538	0.00068605	-1.9774	-0.00060194	0.27632	8.4112E-05	304.4022960346698	73.624	0.15681	74.942	74.873	75.03	1.318					6	4	2	0	0	0	0.14606	1	30911	30911		0	0	1	210700	+		39978	12557	19665	19748	46341	46341					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	759.4977294802666	2	759.49545	1516.97635	2.7552	0.0020925	0.029644	2.2515E-05	2.7848	0.002115	759.4949667596507	105.73	0.14992	105.9	105.82	105.97	0.16679					24	7	4	0	0	0	1.0405	1	45032	45032		0	0	1	85426000	+		39979	12557	19665	19748	46342	46342					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.6682922244072	3	506.666059	1516.97635	3.2769	0.0016603	0.46887	0.00023756	3.7458	0.0018978	506.66676879652715	105.73	0.12915	105.89	105.82	105.95	0.16679					17	6	3	0	0	0	1.0405	1	45051	45051		0	0	1	32776000	+		39980	12557	19665	19748	46343	46343					0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	506.666059	1516.97635	1.4178	0.00071835	2.1289	0.0010786	3.5467	0.001797	507.0018804701777	105.83	0.080444	105.83	105.78	105.86	0	-0.03312	0.0018185	NaN	0	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4092600	+		39981	12557	19665	19748							0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	506.666059	1516.97635	3.07	0.0015555	1.3559	0.000687	4.426	0.0022425	506.6670545127387	105.77	0.10062	105.83	105.78	105.88	0.05455	-0.036831	0.00064353	NaN	0	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10254000	+		39982	12557	19665	19748							0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	506.666059	1516.97635	3.4435	0.0017447	0.45413	0.00023009	3.8976	0.0019748	506.6668472684119	105.75	0.14832	105.91	105.83	105.98	0.15859	0.041971	-0.00072721	NaN	0	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36752000	+		39983	12557	19665	19748							0.2385383637574705
VRRRRLPPRRR	11	Unmodified	_VRRRRLPPRRR_					0	0	0			REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	REV__ENST00000357060.7_2_10:105990583-105992116:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	506.666059	1516.97635	3.2769	0.0016603	0.46887	0.00023756	3.7458	0.0018978	506.66676879652715	105.73	0.12915	105.89	105.82	105.95	0.16679	0.02798	-0.00070481	NaN	0	17	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	32776000	+		39984	12557	19665	19748							0.2385383637574705
VRRRRQVRRA	10	Unmodified	_VRRRRQVRRA_					0	0	0			REV__ENSG00000152402|ENST00000526355|GUCY1A2	REV__ENSG00000152402|ENST00000526355|GUCY1A2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.9711181521416	4	338.969714	1351.84975	0.77786	0.00026367	0.017975	6.093E-06	0.79583	0.00026976	339.22001085112146	32.88	0.90034	33.174	32.621	33.521	0.29431					79	30	4	0	0	0	0.89803	1	13847	13847		0.62683	0.17231	1	4237600	+		39985	10420	19666	19749	46344	46344					0.18789910150644573
VRRRRRRPRP	10	Unmodified	_VRRRRRRPRP_					0	0	0		ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.9794494509697	4	351.980347	1403.89228	-1.3556	-0.00047714	-0.032283	-1.1363E-05	-1.3879	-0.0004885	351.9802264837377	36.565	0.81154	36.565	36.27	37.081	0					133	55	3	0	0	0	0.89803	1	15336	15336		0.69767	0.24315	1	35389000			39986	7253	19667	19750	46345	46345					0.20649305278857355
VRRRRRRPRP	10	Unmodified	_VRRRRRRPRP_					0	0	0		ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.9806091189384	4	351.980347	1403.89228	1.1029	0.0003882	-2.0392	-0.00071774	-0.93626	-0.00032955	351.979766944294	35.972	0.14097	36.273	36.258	36.399	0.30196					19	12	2	0	0	0	0.89803	1	15145	15145		0.15932	0.064481	1	16420000			39987	7253	19667	19750	46346	46346					0.20649305278857355
VRRRRRRPRP	10	Unmodified	_VRRRRRRPRP_					0	0	0		ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	ENST00000549122.5_1_12:93965649-93966593:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	351.980347	1403.89228	1.1029	0.0003882	-2.0392	-0.00071774	-0.93626	-0.00032955	351.979766944294	35.972	0.14097	36.273	36.258	36.399	0.30196	-0.14568	-0.0020698	NaN	0.15932	19	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16420000			39988	7253	19667	19750							0.20649305278857355
VRRSLPCV	8	Unmodified	_VRRSLPCV_					0	0	0		ENST00000594919.1_1_19:52839677-52851056:+|nuORF	ENST00000594919.1_1_19:52839677-52851056:+|nuORF	ENST00000594919.1_1_19:52839677-52851056:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2726318240166	2	465.271104	928.527655	3.3713	0.0015686	0.44991	0.00020933	3.8212	0.0017779	465.27135604840157	94.602	0.35246	94.747	94.571	94.924	0.14493					18	10	2	0	0	0	0.88958	2	39574	39574;39625		2.8892	0.31174	1	1543200			39989	7511	19668	19751	46347;46348	46347					0.060532573564501035
VRRSRRLSHL	10	Unmodified	_VRRSRRLSHL_					0	0	0			REV__ENSG00000181965|ENST00000314744|NEUROG1	REV__ENSG00000181965|ENST00000314744|NEUROG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	427.2654296755791	3	427.26545	1278.77452	1.0355	0.00044245	-1.2983	-0.0005547	-0.26272	-0.00011225	427.26482516564323	42.65	1.0747	42.65	42.384	43.459	0					143	34	5	0	0	0	0.89803	1	17787	17787		1.2148	0	1	51340000	+		39990	11335	19669	19752	46349	46349					0.1462830789957934
VRRVGAGQ	8	Unmodified	_VRRVGAGQ_					0	0	0			REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.7504760622978	2	421.751393	841.488233	0.76324	0.0003219	0.010193	4.299E-06	0.77343	0.00032619	421.7513746790956	71.908	0.60112	71.908	71.636	72.237	0					49	18	4	0	0	0	0.89178	1	29876	29876		0.69038	0	1	23435000	+		39991	12650	19670	19753	46350	46350					0.06114873397245901
VRRVGAGQ	8	Unmodified	_VRRVGAGQ_					0	0	0			REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	421.7524597048759	2	421.751393	841.488233	1.9995	0.0008433	0.32992	0.00013914	2.3294	0.00098244	421.7514766676942	71.697	0.60223	72.021	71.72	72.322	0.32359					52	18	4	0	0	0	0.89178	2	29930	29930;30056		0.69038	0	1	19699000	+		39992	12650	19670	19753	46351;46352	46351					0.06114873397245901
VRRVGAGQ	8	Unmodified	_VRRVGAGQ_					0	0	0			REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	REV__ENST00000369617.8_1_1:113933414-114092146:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.7525512576103	2	421.751393	841.488233	2.5184	0.0010622	0.3916	0.00016516	2.91	0.0012273	421.751361890409	69.877	0.74308	71.231	70.717	71.46	1.3536					45	23	3	0	0	0	0.89178	1	29354	29354		0.69038	0	1	4711800	+		39993	12650	19670	19753	46353	46353					0.06114873397245901
VRRVRAKRPP	10	Unmodified	_VRRVRAKRPP_					0	0	0		ENST00000558457.5_1_15:41576231-41578244:+|nuORF;ENST00000560545.1_1_15:41576231-41577603:+|nuORF	ENST00000558457.5_1_15:41576231-41578244:+|nuORF	ENST00000558457.5_1_15:41576231-41578244:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2707702517509	3	412.270424	1233.78944	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.66	1	105.66	105.16	106.16	0								0	0	0	0.66254	1	44902	44902		0.15932	0	1				39994	7314	19671	19754	46354	46354					0.18189799767537806
VRSALGVV	8	Unmodified	_VRSALGVV_					0	0	0		ENST00000309880.5_1_11:65122263-65123353:+|nuORF	ENST00000309880.5_1_11:65122263-65123353:+|nuORF	ENST00000309880.5_1_11:65122263-65123353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	800.5000488162041	1	800.498864	799.491587	1.2819	0.0010261	1.6592	0.0013282	2.9411	0.0023544	800.4997828960243	103.98	0.093842	103.98	103.93	104.03	0					9	4	3	0	0	0	0.89051	1	43791	43791		2.3027	0	1	41660000			39995	5794	19672	19755	46355	46355					0.08382123451247026
VRSALGVV	8	Unmodified	_VRSALGVV_					0	0	0		ENST00000309880.5_1_11:65122263-65123353:+|nuORF	ENST00000309880.5_1_11:65122263-65123353:+|nuORF	ENST00000309880.5_1_11:65122263-65123353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	800.5007812380791	1	800.498864	799.491587	2.7545	0.002205	0.42909	0.00034348	3.1836	0.0025485	800.498894388206	103.96	0.076324	104.02	103.97	104.05	0.059502					6	3	2	0	0	0	0.89051	1	43744	43744		2.3027	0	1	52151000			39996	5794	19672	19755	46356	46356					0.08382123451247026
VRSGGGSG	8	Unmodified	_VRSGGGSG_					0	0	0		ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	ENSG00000126461|ENST00000360565|SCAF1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	338.6727477908134	2	338.672277	675.330001	1.6305	0.0005522	0.70032	0.00023718	2.3308	0.00078938	338.67228682145486	76.832	1.0641	77.149	76.479	77.543	0.31653					67	33	3	0	0	0	0.88587	1	32127	32127		5.2307	0	1	3451000			39997	2308	19673	19756	46357	46357					-0.020650455818440605
VRSGYLIRSL	10	Unmodified	_VRSGYLIRSL_					0	0	0			REV__tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	REV__tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	582.3488036990166	2	582.348397	1162.68224	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.86	1	104.03	103.53	104.53	0.16055								0	0	0	0.6607	1	43888	43888		3.2813	0.70383	1		+		39998	15266	19674	19757	46358	46358					0.10740785042662537
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	889.5494262576103	1	889.546542	888.539266	1.1526	0.0010253	2.1565	0.0019183	3.3091	0.0029436	889.5481045648634	107.78	0.1925	107.78	107.7	107.89	0					31	10	4	0	0	0	0.89198	2	46271	46271;46347		0	0	1	351470000	+		39999	13183	19675	19758	46359;46360	46359					0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	889.5501586794853	1	889.546542	888.539266	2.8077	0.0024975	0.61421	0.00054636	3.4219	0.0030439	889.5466159854475	107.76	0.21664	107.81	107.71	107.93	0.052452					32	11	4	0	0	0	0.89198	1	46158	46158		0	0	1	244660000	+		40000	13183	19675	19758	46361	46361					0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	889.5498535037041	1	889.546542	888.539266	2.9758	0.0026471	1.2535	0.001115	4.2293	0.0037622	889.5472430075345	106.15	0.18124	106.31	106.23	106.41	0.15781					24	9	4	0	0	0	0.89198	1	45386	45386		0	0	1	96870000	+		40001	13183	19675	19758	46362	46362					0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	889.5503417849541	1	889.546542	888.539266	2.9761	0.0026474	0.23422	0.00020835	3.2103	0.0028557	889.5462814019146	107.73	0.20123	107.89	107.79	107.99	0.15781					29	10	4	0	0	0	0.89198	2	46399	46399;46473		0	0	1	516040000	+		40002	13183	19675	19758	46363;46364	46363					0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	889.5489990115166	1	889.546542	888.539266	3.1067	0.0027636	0.48398	0.00043052	3.5907	0.0031941	889.5464502175025	106.14	0.17754	106.3	106.2	106.38	0.16174					25	9	4	0	0	0	0.89198	1	45306	45306		0	0	1	102620000	+		40003	13183	19675	19758	46365	46365					0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	889.546542	888.539266	1.1526	0.0010253	2.1565	0.0019183	3.3091	0.0029436	889.5481045648634	107.78	0.1925	107.78	107.7	107.89	0	-0.06422	0.0011593	NaN	0	31	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	351470000	+		40004	13183	19675	19758							0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	889.546542	888.539266	2.8077	0.0024975	0.61421	0.00054636	3.4219	0.0030439	889.5466159854475	107.76	0.21664	107.81	107.71	107.93	0.052452	-0.031196	-0.00021264	NaN	0	32	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	244660000	+		40005	13183	19675	19758							0.09053777651445216
VRSKISVT	8	Unmodified	_VRSKISVT_					0	0	0			REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	REV__ENST00000459896.5_1_2:197703237-197707512:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	889.546542	888.539266	2.9761	0.0026474	0.23422	0.00020835	3.2103	0.0028557	889.5462814019146	107.73	0.20123	107.89	107.79	107.99	0.15781	0.046581	-0.00055065	NaN	0	29	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	516040000	+		40006	13183	19675	19758							0.09053777651445216
VRSKKALI	8	Unmodified	_VRSKKALI_					0	0	0		tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.6147338747978	1	914.614562	913.607286	3.1649	0.0028947	2.4361	0.0022281	5.6011	0.0051228	914.6164355928935	106.95	0.19585	107.12	107	107.19	0.16174					19	8	3	0	0	0	0.89051	1	45871	45871		2.3027	1.5091	1	22143000			40007	17052	19676	19759	46366	46366					0.147026473020901
VRSKKALI	8	Unmodified	_VRSKKALI_					0	0	0		tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	tr|A0A7D6ZEI4|A0A7D6ZEI4_9CLOTC40familypeptidaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13795PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	914.614562	913.607286	2.9172	0.0026681	4.7713	0.0043639	7.6885	0.007032	914.6182625271789	106.98	0.134	107.14	107.01	107.14	0.15781	0.010362	0.00093029	NaN	2.3027	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20630000			40008	17052	19676	19759							0.147026473020901
VRSKLISP	8	Unmodified	_VRSKLISP_					0	0	0		ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	ENSG00000171219|ENST00000342711|CDC42BPG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	301.1283141970634	3	300.527277	898.560001	-0.13925	-4.1849E-05	0.51313	0.00015421	0.37388	0.00011236	300.5273917046782	22.291	0.80136	23.468	22.93	23.731	1.177					36	25	2	0	0	0	2.3239	1	9122	9122		0	0	1	503330			40009	4181	19677	19760	46367	46367					0.10666368031104412
VRSKLLLL	8	Unmodified	_VRSKLLLL_					0	0	0		nc|ENSG00000213088|Q16570-2|ACKR1;ENSG00000213088|ENST00000368122|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3307372927666	2	471.328945	940.643337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.31	109.81	110.81	0.15228								0	0	0	1.0178	1	47783	47783		0	0	1				40010	5213	19678	19761	46368	46368					0.17064104478959052
VRSKLLLL	8	Unmodified	_VRSKLLLL_					0	0	0		nc|ENSG00000213088|Q16570-2|ACKR1;ENSG00000213088|ENST00000368122|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3312866091728	2	471.328945	940.643337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.41	1	110.56	110.06	111.06	0.15228								0	0	0	1.0178	1	47879	47879		0	0	1				40011	5213	19678	19761	46369	46369					0.17064104478959052
VRSLALIG	8	Unmodified	_VRSLALIG_					0	0	0			REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|237|3|anti-sense	REV__HERVH-int_dup3022|chr7:150307704-150312283:+|1.3022689957507934|0.1120723835863916|3.54|428.0|237|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	415.2120239138603	2	414.76872	827.522887	0.11242	4.6627E-05	0.72541	0.00030088	0.83783	0.00034751	414.76978244173097	104.78	0.073471	104.78	104.72	104.79	0					5	3	2	0	0	0	2.3239	1	44316	44316		0	0	1	3423100	+		40012	8320	19679	19762	46370	46370					0.1022269648534575
VRSLKFHKLGI	11	Unmodified	_VRSLKFHKLGI_					0	0	0			REV__tr|A0A7D6VVT8|A0A7D6VVT8_9CLOTDUF4116domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06385PE=4SV=1	REV__tr|A0A7D6VVT8|A0A7D6VVT8_9CLOTDUF4116domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06385PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	433.2759887576103	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.953	1	87.197	86.697	87.697	0.24387								0	0	0	0.63775	1	36428	36428		0.08335	0	1		+		40013	15538	19680	19763	46371	46371					0.16649612756123133
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	844.5281249880791	1	844.525079	843.517802	1.218	0.0010286	1.9631	0.0016579	3.181	0.0026865	844.5265674001904	104	0.073944	104	103.95	104.03	0					6	3	2	0	0	0	0.89051	1	43815	43815		2.3027	0	1	25286000			40014	3385	19681	19764	46372	46372					0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.7678405642509	2	422.766178	843.517802	3.0489	0.001289	2.4158	0.0010213	5.4647	0.0023103	422.7668011455217	104	0.093872	104.06	103.99	104.09	0.059502					10	4	3	0	0	0	0.89051	1	43767	43767		2.3027	0	1	16668000			40015	3385	19681	19764	46373	46373					0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.7673217654228	2	422.766178	843.517802	3.102	0.0013114	1.7163	0.00072558	4.8182	0.002037	422.7663109857942	103.96	0.13557	104.12	104.05	104.19	0.16055					9	6	2	0	0	0	0.89051	1	43961	43961		2.3027	0	1	17667000			40016	3385	19681	19764	46374	46374					0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.7677184939384	2	422.766178	843.517802	3.2466	0.0013726	4.3375	0.0018338	7.5842	0.0032063	422.7666450064057	103.92	0.14223	104.09	103.99	104.13	0.1731					9	6	2	0	0	0	0.89051	1	43885	43885		2.3027	0	1	10858000			40017	3385	19681	19764	46375	46375					0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	422.766178	843.517802	0.34086	0.0001441	4.3717	0.0018482	4.7125	0.0019923	422.7676592827719	104	0.091644	104	103.95	104.05	0	-0.066782	0.00073292	NaN	2.3027	11	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16208000			40018	3385	19681	19764							0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	844.525079	843.517802	2.7804	0.0023481	0.22635	0.00019116	3.0068	0.0025393	844.5243475997565	103.99	0.075378	104.05	103.99	104.07	0.059502	-0.015321	-0.00053153	NaN	2.3027	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13426000			40019	3385	19681	19764							0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	844.525079	843.517802	2.93	0.0024745	-0.8569	-0.00072368	2.0731	0.0017508	844.5234953282701	103.96	0.074493	104.12	104.07	104.15	0.16055	0.048714	-0.0014464	NaN	2.3027	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13331000			40020	3385	19681	19764							0.0897839262272555
VRSLTVLG	8	Unmodified	_VRSLTVLG_					0	0	0		OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant;ENSG00000154358|ENST00000680850|OBSCN;nc|ENSG00000154358|Q5VST9-3|OBSCN;nc|ENSG00000154358|Q5VST9|OBSCN;nc|ENSG00000154358|Q5VST9-2|OBSCN;nc|ENSG00000154358|Q5VST9-6|OBSCN;OBSCN|p.G3435Vfs*25|1|0.11|ENSG00000154358|chr1:228288852-228288853|-/T|frameshift_variant;OBSCN|p.E3436Rfs*24|1|0.11|ENSG00000154358|chr1:228288854-228288855|-/A|frameshift_variant;nc|ENSG00000154358|Q5VST9-5|OBSCN	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	OBSCN|p.P6706Tfs*18|1|0.25|ENSG00000154358|chr1:228370088-228370089|-/GA|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	844.525079	843.517802	3.051	0.0025766	-1.4644	-0.0012367	1.5866	0.0013399	844.5219377815239	103.93	0.060738	104.1	104.07	104.13	0.17309	0.033693	-0.0019594	NaN	2.3027	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10037000			40021	3385	19681	19764							0.0897839262272555
VRSRPRRT	8	Unmodified	_VRSRPRRT_					0	0	0			REV__ENST00000460043.5_1_20:31973484-31989268:-|nuORF	REV__ENST00000460043.5_1_20:31973484-31989268:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.2117797732353	3	343.212574	1026.61589	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.48	1	100.48	99.985	100.98	0								0	0	0	1.0178	1	42065	42065		0.35063	0	1		+		40022	9033	19682	19765	46376	46376					0.10365013991281558
VRSTLLTV	8	Unmodified	_VRSTLLTV_					0	0	0			REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	444.7802001833916	2	444.779285	887.544017	3.2473	0.0014443	-0.52013	-0.00023134	2.7272	0.001213	444.7786925488138	104.02	0.094345	104.08	104.01	104.11	0.059502					9	4	3	0	0	0	0.8873	1	43794	43794		4.3292	0	1	19413000	+		40023	14148	19683	19766	46377	46377					0.09574661794181338
VRSTLLTV	8	Unmodified	_VRSTLLTV_					0	0	0			REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	444.779285	887.544017	3.2473	0.0014443	-0.52013	-0.00023134	2.7272	0.001213	444.7786925488138	104.02	0.094345	104.08	104.01	104.11	0.059502	-0.042651	0.00011526	NaN	4.3292	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19413000	+		40024	14148	19683	19766							0.09574661794181338
VRSTLLTV	8	Unmodified	_VRSTLLTV_					0	0	0			REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	444.779285	887.544017	3.3688	0.0014984	-1.0973	-0.00048804	2.2715	0.0010103	444.77834787082264	104	0.11594	104.16	104.05	104.17	0.16055	0.036182	-0.00039814	NaN	4.3292	6	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11763000	+		40025	14148	19683	19766							0.09574661794181338
VRSTLLTV	8	Unmodified	_VRSTLLTV_					0	0	0			REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	REV__ENST00000608290.1_1_22:46410754-46410880:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	444.779285	887.544017	3.3828	0.0015046	-1.598	-0.00071074	1.7849	0.00079388	444.7768148129611	103.95	0.064621	104.13	104.09	104.15	0.1731	0.0064691	-0.00084354	NaN	4.3292	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8401000	+		40026	14148	19683	19766							0.09574661794181338
VRSVLRRI	8	Unmodified	_VRSVLRRI_					0	0	0			REV__ENST00000377889.6_1_11:62623694-62648499:+|nuORF	REV__ENST00000377889.6_1_11:62623694-62648499:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	998.6622192263603	1	998.658158	997.650882	3.6083	0.0036035	0.814	0.00081291	4.4223	0.0044164	998.6583358358673	106.91	0.15085	107.07	107	107.15	0.16174					25	6	5	0	0	0	0.89198	1	45860	45860		0	0	1	547410000	+		40027	12735	19684	19767	46378	46378					0.15196256799242747
VRSVRRRH	8	Unmodified	_VRSVRRRH_					0	0	0		nc|ENSG00000137103|A6NDV4|TMEM8B;ENSG00000137103|ENST00000643932|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1065.654589831829	1	1065.65005	1064.64278	3.7081	0.0039515	1.1992	0.001278	4.9073	0.0052295	1065.6507348469927	106.05	0.11016	106.2	106.14	106.25	0.15781					12	5	3	0	0	0	0.89198	1	45317	45317		0	0	1	75855000			40028	2759	19685	19768	46379	46379					0.11304122602473399
VRSVRRRH	8	Unmodified	_VRSVRRRH_					0	0	0		nc|ENSG00000137103|A6NDV4|TMEM8B;ENSG00000137103|ENST00000643932|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1065.654467761517	1	1065.65005	1064.64278	3.7052	0.0039484	0.56845	0.00060577	4.2736	0.0045542	1065.6504969430177	107.53	0.18509	107.69	107.6	107.79	0.15781					30	9	4	0	0	0	0.89198	1	46266	46266		0	0	1	133410000			40029	2759	19685	19768	46380	46380					0.11304122602473399
VRSVRRRH	8	Unmodified	_VRSVRRRH_					0	0	0		nc|ENSG00000137103|A6NDV4|TMEM8B;ENSG00000137103|ENST00000643932|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1065.65005	1064.64278	3.7944	0.0040435	-0.035508	-3.7839E-05	3.7589	0.0040057	1065.649761207986	107.55	0.1694	107.71	107.6	107.77	0.15795	0.010608	-0.00040962	NaN	0	27	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	143740000			40030	2759	19685	19768							0.11304122602473399
VRSVRRRH	8	Unmodified	_VRSVRRRH_					0	0	0		nc|ENSG00000137103|A6NDV4|TMEM8B;ENSG00000137103|ENST00000643932|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	nc|ENSG00000137103|A6NDV4|TMEM8B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1065.65005	1064.64278	3.7993	0.0040487	1.8635	0.0019858	5.6628	0.0060345	1065.65156894618	106.01	0.12884	106.18	106.11	106.24	0.16174	-0.013459	0.000285	NaN	0	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	26306000			40031	2759	19685	19768							0.11304122602473399
VRTPARPRP	9	Unmodified	_VRTPARPRP_					0	0	0			REV__ENST00000530490.1_1_11:17035717-17073753:+|nuORF	REV__ENST00000530490.1_1_11:17035717-17073753:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	525.3237182497978	2	525.319974	1048.6254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.087	1	97.186	96.686	97.686	0.098824								0	0	0	0.42693	1	40626	40626		1.6526	0	1		+		40032	13701	19686	19769	46381	46381					0.10302782276789912
VRTQEQKL	8	Unmodified	_VRTQEQKL_					0	0	0		ENSG00000120451|ENST00000265909|SNX19;ENST00000580193.1_1_18:14630000-14630792:-|nuORF;ENST00000444901.1_1_21:14899938-14900730:+|nuORF	ENSG00000120451|ENST00000265909|SNX19	ENSG00000120451|ENST00000265909|SNX19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2919189333916	2	501.290548	1000.56654	2.3769	0.0011915	-0.13659	-6.8474E-05	2.2403	0.001123	501.29029047259	66.946	0.87215	67.27	66.843	67.715	0.32449					61	28	3	0	0	0	0.8873	1	28174	28174		4.3292	0	1	2426300			40033	2105	19687	19770	46382	46382					0.06628261191792717
VRVFVGGQ	8	Unmodified	_VRVFVGGQ_					0	0	0			REV__ENST00000549336.5_1_12:48237153-48237348:-|nuORF	REV__ENST00000549336.5_1_12:48237153-48237348:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	861.4958984255791	1	861.494113	860.486836	1.1933	0.001028	1.3	0.0011199	2.4933	0.002148	861.4953166538501	107.87	0.17604	107.87	107.75	107.93	0					24	9	3	0	0	0	0.89198	1	46337	46337		0	0	1	63318000	+		40034	13819	19688	19771	46383	46383					0.05101239308487493
VRVGALLL	8	Unmodified	_VRVGALLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	840.5688964724541	1	840.566549	839.559273	1.2237	0.0010286	2.2399	0.0018828	3.4636	0.0029114	840.5682619377012	106.24	0.19179	106.24	106.15	106.34	0					28	9	5	0	0	0	0.89198	1	45276	45276		0	0	1	159210000			40035	1653	19689	19772	46384	46384					0.13307573382053306
VRVGALLL	8	Unmodified	_VRVGALLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	840.5684692263603	1	840.566549	839.559273	2.7788	0.0023358	0.75599	0.00063546	3.5348	0.0029713	840.5669863902137	106.22	0.2001	106.28	106.17	106.37	0.05455					25	9	4	0	0	0	0.89198	1	45184	45184		0	0	1	196790000			40036	1653	19689	19772	46385	46385					0.13307573382053306
VRVGALLL	8	Unmodified	_VRVGALLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	840.5697509646416	1	840.566549	839.559273	2.9118	0.0024475	0.83258	0.00069984	3.7443	0.0031474	840.567351292213	108.86	0.48806	109.02	108.91	109.39	0.15898					42	23	2	0	0	0	0.89198	1	47251	47251		0	0	1	13588000			40037	1653	19689	19772	46386	46386					0.13307573382053306
VRVGALLL	8	Unmodified	_VRVGALLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	840.5696899294853	1	840.566549	839.559273	3.032	0.0025486	0.93293	0.00078419	3.9649	0.0033328	840.5675851984108	107.57	0.47506	107.73	107.31	107.79	0.15796					45	24	3	0	0	0	0.89198	1	46157	46157		0	0	1	29745000			40038	1653	19689	19772	46387	46387					0.13307573382053306
VRVGALLL	8	Unmodified	_VRVGALLL_					0	0	0		ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	ENSG00000108947|ENST00000226091|EFNB3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	840.566549	839.559273	3.0288	0.0025459	0.5677	0.00047719	3.5965	0.0030231	840.5672458697354	108.98	0.4511	109.13	108.93	109.38	0.1548	0.05735	-0.00011395	NaN	0	40	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10672000			40039	1653	19689	19772							0.13307573382053306
VRVGGHPC	8	Unmodified	_VRVGGHPC_					0	0	0		chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|22	chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|22	chr14:94062621-94065779|133|19.53|0.06|8.3|-|0|TE_info:L1PB1,L1PB1_dup11175,L1,LINE,donor,+,94065779,94071367|DDX24,None|22	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.7139160037041	2	412.713422	823.412291	0.81554	0.00033659	0.88584	0.0003656	1.7014	0.00070218	412.71373903587164	58.752	0.35183	58.752	58.59	58.942	0					22	10	3	0	0	0	0.89051	1	24529	24529		2.3027	0	1	1430000			40040	203	19690	19773	46388	46388					-0.006478467745637317
VRVGGVFH	8	Unmodified	_VRVGGVFH_					0	0	0		ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7524597048759	2	435.750862	869.487171	1.4128	0.00061564	2.5937	0.0011302	4.0066	0.0017459	435.751903025503	64.36	0.73857	64.36	63.983	64.722	0					51	22	3	0	0	0	0.89008	1	26844	26844		2.5775	0	1	3672300			40041	1092	19691	19774	46389	46389					0.047206590283281
VRVGGVFH	8	Unmodified	_VRVGGVFH_					0	0	0		ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7542297244072	2	435.750862	869.487171	2.3162	0.0010093	0.94892	0.00041349	3.2651	0.0014228	435.7511277312858	63.625	0.67478	63.954	63.598	64.273	0.32899					54	21	3	0	0	0	0.89008	2	26550	26550;26755		2.5775	0	1	5760800			40042	1092	19691	19774	46390;46391	46390					0.047206590283281
VRVGGVFH	8	Unmodified	_VRVGGVFH_					0	0	0		ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7528869509697	2	435.750862	869.487171	3.0613	0.001334	1.6333	0.0007117	4.6946	0.0020457	435.7513965074529	62.348	0.62634	63.766	63.365	63.992	1.4177					48	19	3	0	0	0	0.89008	1	26050	26050		2.5775	0	1	4701700			40043	1092	19691	19774	46392	46392					0.047206590283281
VRVGGVFH	8	Unmodified	_VRVGGVFH_					0	0	0		ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	ENSG00000087884|ENST00000393427|AAMDC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7530090212822	2	435.750862	869.487171	2.5781	0.0011234	1.7084	0.00074444	4.2865	0.0018678	435.7514947311532	61.684	0.6664	63.641	63.241	63.908	1.9571					51	20	3	0	0	0	0.89008	2	25835	25835;25940		2.5775	0	1	4444500			40044	1092	19691	19774	46393;46394	46393					0.047206590283281
VRVKRRSG	8	Unmodified	_VRVKRRSG_					0	0	0			REV__ENSG00000163083|ENST00000295228|INHBB	REV__ENSG00000163083|ENST00000295228|INHBB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.3090087771416	2	479.306867	956.599181	3.2615	0.0015633	0.66854	0.00032044	3.9301	0.0018837	479.3074993019799	106.62	0.14178	106.78	106.7	106.84	0.15781					16	6	3	0	0	0	0.89198	1	45709	45709		0	0	1	19821000	+		40045	10672	19692	19775	46395	46395					0.11914513105330116
VRVLKVVKGL	10	Unmodified	_VRVLKVVKGL_					0	0	0		ENST00000543677.1_1_12:121469378-121476732:-|nuORF	ENST00000543677.1_1_12:121469378-121476732:-|nuORF	ENST00000543677.1_1_12:121469378-121476732:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	555.3220703005791	2	555.889701	1109.76485	2.6981	0.0014999	1.1629	0.00064642	3.861	0.0021463	555.8906676709875	101.77	0.094818	101.83	101.76	101.86	0.067009					4	2	2	0	0	0	0.12561	1	42591	42591		0	0	1	388220			40046	7226	19693	19776	46396	46396					0.2143572684146875
VRVLPGGG	8	Unmodified	_VRVLPGGG_					0	0	0		ENSG00000158445|ENST00000371741|KCNB1	ENSG00000158445|ENST00000371741|KCNB1	ENSG00000158445|ENST00000371741|KCNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	754.4590942263603	1	754.456999	753.449723	1.3487	0.0010175	1.8854	0.0014225	3.2341	0.00244	754.4581246555026	104.5	0.10978	104.5	104.44	104.54	0					17	5	4	0	0	0	0.89198	1	44107	44107		0	0	1	153250000			40047	3502	19694	19777	46397	46397					0.06313567762731509
VRVLPPGT	8	Unmodified	_VRVLPPGT_					0	0	0		ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.1706115603447	2	419.760895	837.507237	3.0126	0.0012646	2.0896	0.00087713	5.1022	0.0021417	419.7621104299589	98.381	0.1136	98.461	98.39	98.504	0.080376					5	3	2	0	0	0	2.3239	1	41184	41184		0	0	1	5981300			40048	5989	19695	19778	46398	46398					0.08198409968292708
VRVLPPGT	8	Unmodified	_VRVLPPGT_					0	0	0		ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	838.5197631716728	1	838.514514	837.507237	2.9028	0.0024341	0.17505	0.00014678	3.0779	0.0025808	838.5143507275172	104.78	0.22333	104.94	104.81	105.03	0.16055					17	11	2	0	0	0	2.3239	1	44533	44533		0	0	1	21583000			40049	5989	19695	19778	46399	46399					0.08198409968292708
VRVLPPGT	8	Unmodified	_VRVLPPGT_					0	0	0		ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	838.514514	837.507237	1.2267	0.0010286	1.4649	0.0012284	2.6916	0.002257	838.5158517469978	104.85	0.12813	104.85	104.77	104.9	0	-0.048797	0.0016458	NaN	0	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6157800			40050	5989	19695	19778							0.08198409968292708
VRVLPPGT	8	Unmodified	_VRVLPPGT_					0	0	0		ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	838.514514	837.507237	2.7777	0.0023291	-1.5864	-0.0013303	1.1912	0.00099885	838.5141626434831	104.81	0.18544	104.87	104.78	104.97	0.056801	-0.026554	-0.00091278	NaN	0	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13151000			40051	5989	19695	19778							0.08198409968292708
VRVLPPGT	8	Unmodified	_VRVLPPGT_					0	0	0		ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	ENST00000356609.2_1_1:220088793-220101375:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	838.514514	837.507237	3.0302	0.0025409	-2.0486	-0.0017178	0.98164	0.00082312	838.5135451594617	104.76	0.20596	104.93	104.79	105	0.17309	0.033971	-0.0013003	NaN	0	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20988000			40052	5989	19695	19778							0.08198409968292708
VRVNHKKR	8	Unmodified	_VRVNHKKR_					0	0	0			REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2224304080009	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.85	1	66.174	65.674	66.674	0.32449								0	0	0	1.0178	1	27571	27571		0.40072	0	1		+		40053	15749	19696	19779	46400	46400					0.12498488513710981
VRVNHKKR	8	Unmodified	_VRVNHKKR_					0	0	0			REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2226745486259	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.131	1	70.453	69.953	70.953	0.32224								0	0	0	1.0178	1	29351	29351		0.40072	0	1		+		40054	15749	19696	19779	46401	46401					0.12498488513710981
VRVNHKKR	8	Unmodified	_VRVNHKKR_					0	0	0			REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2229492068291	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.345	1	92.513	92.013	93.013	0.16835								0	0	0	1.0178	1	38668	38668		0.40072	0	1		+		40055	15749	19696	19779	46402	46402					0.12498488513710981
VRVNHKKR	8	Unmodified	_VRVNHKKR_					0	0	0			REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	REV__tr|A0A7D6ZWN4|A0A7D6ZWN4_9CLOTNucleosidehydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18640PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	346.2225524783134	3	346.22107	1035.64138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.164	1	84.802	84.302	85.302	1.6379								0	0	0	1.0178	1	34885	34885		0.40072	0	1		+		40056	15749	19696	19779	46403	46403					0.12498488513710981
VRVPNRLG	8	Unmodified	_VRVPNRLG_					0	0	0			REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.1923705935478	3	304.190888	909.550834	0.060585	1.8429E-05	3.1994	0.00097322	3.26	0.00099165	304.1922324510868	28.222	0.67293	29.998	29.54	30.213	1.7754					36	21	4	0	0	0	0.88663	1	11787	11787		3.2813	0	1	8617900	+		40057	8433	19697	19780	46404	46404					0.092440194654273
VRVPNRLG	8	Unmodified	_VRVPNRLG_					0	0	0			REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	REV__DDX55|p.F474Sfs*7|1|0.09|ENSG00000111364|chr12:123619518-123619519|-/C|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	304.190888	909.550834	0.43225	0.00013149	4.9011	0.0014909	5.3334	0.0016224	304.1928716988879	29.994	0.68979	30.279	29.84	30.53	0.2859	0.14085	0.00089071	NaN	3.2813	39	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9125600	+		40058	8433	19697	19780							0.092440194654273
VRVRGPAG	8	Unmodified	_VRVRGPAG_					0	0	0		nc|ENSG00000069424|Q13303-5|KCNAB2	nc|ENSG00000069424|Q13303-5|KCNAB2	nc|ENSG00000069424|Q13303-5|KCNAB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2478820681572	2	406.248486	810.48242	0.23794	9.6662E-05	0.20758	8.4328E-05	0.44552	0.00018099	406.24858817811304	70.461	1.1698	70.461	69.866	71.035	0					103	37	5	0	0	0	0.89178	1	29550	29550		0.69038	0	1	372410000			40059	7830	19698	19781	46405	46405					0.06959774885569914
VRVRGPAT	8	Unmodified	_VRVRGPAT_					0	0	0			REV__ENST00000401395.1_1_22:25465993-25466170:+|nuORF	REV__ENST00000401395.1_1_22:25465993-25466170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	428.2625305056572	2	428.261594	854.508634	1.042	0.00044623	0.3961	0.00016963	1.4381	0.00061587	428.26172948888245	73.476	0.98903	73.476	73.184	74.173	0					91	31	5	0	0	0	0.89178	1	30672	30672		0.69038	0	1	296800000	+		40060	12885	19699	19782	46406	46406					0.07556044057048439
VRVRTRIIPS	10	Unmodified	_VRVRTRIIPS_					0	0	0		ENST00000502557.5_2_6:31124822-31125704:-|nuORF	ENST00000502557.5_2_6:31124822-31125704:-|nuORF	ENST00000502557.5_2_6:31124822-31125704:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2527343630791	3	399.591051	1195.75132	0.6017	0.00024043	4.1938	0.0016758	4.7955	0.0019162	399.59254570547137	27.851	0.248	29.13	28.998	29.246	1.2789					10	7	2	0	0	0	0.1256	1	11685	11685		0.62683	0	1	417570			40061	6980	19700	19783	46407	46407					0.16127869062233913
VRVVGLGGL	9	Unmodified	_VRVVGLGGL_					0	0	0			REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.2839233279228	2	435.281995	868.549437	3.3245	0.0014471	1.0357	0.00045081	4.3602	0.0018979	435.28250763360614	106.62	0.14178	106.78	106.7	106.84	0.15781					14	6	3	0	0	0	0.85403	1	45708	45708		0	0	1	19555000	+		40062	12267	19701	19784	46408	46408					0.10990385376692302
VRVVGLGGL	9	Unmodified	_VRVVGLGGL_					0	0	0			REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.2837402224541	2	435.281995	868.549437	3.3206	0.0014454	0.83497	0.00036345	4.1555	0.0018088	435.2824612533285	106.6	0.12926	106.77	106.69	106.82	0.16174					16	6	3	0	0	0	0.85403	1	45633	45633		0	0	1	15914000	+		40063	12267	19701	19784	46409	46409					0.10990385376692302
VRVVGLGGL	9	Unmodified	_VRVVGLGGL_					0	0	0			REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	435.281995	868.549437	3.3245	0.0014471	1.0357	0.00045081	4.3602	0.0018979	435.28250763360614	106.62	0.14178	106.78	106.7	106.84	0.15781	0.007375	9.6453E-05	NaN	0	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19555000	+		40064	12267	19701	19784							0.10990385376692302
VRVVGLGGL	9	Unmodified	_VRVVGLGGL_					0	0	0			REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	REV__ENST00000284617.6_1_1:229462728-229478156:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	435.281995	868.549437	3.3206	0.0014454	0.83497	0.00036345	4.1555	0.0018088	435.2824612533285	106.6	0.12926	106.77	106.69	106.82	0.16174	-0.007375	-7.8277E-05	NaN	0	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15914000	+		40065	12267	19701	19784							0.10990385376692302
VRVVSPVL	8	Unmodified	_VRVVSPVL_					0	0	0		nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1;ENSG00000160714|ENST00000292211|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	nc|ENSG00000160714|Q7Z7E8-2|UBE2Q1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	868.5640136599541	1	868.561464	867.554188	3.0395	0.00264	0.47238	0.00041029	3.5119	0.0030503	868.5616877405465	109.35	0.46019	109.51	109.19	109.65	0.15898					56	21	5	0	0	0	0.89176	1	47462	47462		0.79363	0	1	338740000			40066	3569	19702	19785	46410	46410					0.11511269519428424
VRVVVPGV	8	Unmodified	_VRVVVPGV_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	824.5402099490166	1	824.535249	823.527973	1.247	0.0010282	3.3677	0.0027768	4.6147	0.003805	824.5378658220496	109.51	0.30004	109.51	109.37	109.67	0					36	12	4	0	0	0	0.89198	1	47426	47426		0	0	1	37189000			40067	2881	19703	19786	46411	46411					0.10915000347961268
VRVVVPGV	8	Unmodified	_VRVVVPGV_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	824.5377685427666	1	824.535249	823.527973	2.7697	0.0022837	2.5132	0.0020722	5.283	0.004356	824.5371571232979	109.51	0.27331	109.56	109.4	109.68	0.048851					34	10	4	0	0	0	0.89198	1	47198	47198		0	0	1	24768000			40068	2881	19703	19786	46412	46412					0.10915000347961268
VRVVVPGV	8	Unmodified	_VRVVVPGV_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	824.5406982302666	1	824.535249	823.527973	2.8413	0.0023427	3.104	0.0025594	5.9453	0.0049021	824.5377108801938	109.46	0.35178	109.62	109.46	109.81	0.15898					53	14	5	0	0	0	0.89198	1	47552	47552		0	0	1	469500000			40069	2881	19703	19786	46413	46413					0.10915000347961268
VRVVVPGV	8	Unmodified	_VRVVVPGV_					0	0	0		ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	ENSG00000139531|ENST00000266971|SUOX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	824.5385619997978	1	824.535249	823.527973	2.9737	0.0024519	3.6412	0.0030023	6.6149	0.0054542	824.5380700765485	109.45	0.38394	109.61	109.42	109.8	0.1548					45	15	4	0	0	0	0.89176	2	47393	47393;47447		0.79363	0	1	388280000			40070	2881	19703	19786	46414;46415	46414					0.10915000347961268
VRWRMRKLKYK	11	Unmodified	_VRWRMRKLKYK_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.9860107302666	3	521.985407	1562.93439	2.2701	0.001185	0.51454	0.00026858	2.7846	0.0014535	521.9850591301581	92.332	1.5406	92.332	91.756	93.296	0					100	49	3	0	0	0	1.0405	3	38466	38466;38532;38577		0	0	1	1455200			40071	2719	19704	19787	46416;46417;46418	46416					0.17544099852352701
VRWRMRKLKYK	11	Unmodified	_VRWRMRKLKYK_					0	0	0		nc|ENSG00000136270|Q969Z0-2|TBRG4;TBRG4|p.I596Dfs*8|1|0.09|ENSG00000136270|chr7:45101267-45101268|-/T|frameshift_variant;ENSG00000136270|ENST00000258770|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	nc|ENSG00000136270|Q969Z0-2|TBRG4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	521.3807861208916	3	521.985407	1562.93439	2.838	0.0014814	1.1261	0.00058783	3.9641	0.0020692	521.9851071135118	93.034	0.70888	93.203	92.806	93.515	0.16835					34	21	2	0	0	0	0.14606	1	39014	39014		0	0	1	395020			40072	2719	19704	19787	46419	46419					0.17544099852352701
VRYKRLLL	8	Unmodified	_VRYKRLLL_					0	0	0			REV__nc|ENSG00000185247|P43364-2|MAGEA11	REV__nc|ENSG00000185247|P43364-2|MAGEA11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.8539916872978	2	530.853119	1059.69168	1.2699	0.00067416	0.083708	4.4436E-05	1.3537	0.00071859	530.8529917925797	107.61	0.19257	107.61	107.51	107.7	0					33	9	5	0	0	0	0.89178	1	46138	46138		0.69038	0	1	301910000	+		40073	11456	19705	19788	46420	46420					0.16422598118856513
VRYQDEMWK	9	Unmodified	_VRYQDEMWK_					0	0	0		nc|ENSG00000138759|Q86XX4-5|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1;nc|ENSG00000138759|Q86XX4-4|FRAS1;nc|ENSG00000138759|Q86XX4-6|FRAS1;FRAS1-MGST2|1|fusion	nc|ENSG00000138759|Q86XX4-5|FRAS1	nc|ENSG00000138759|Q86XX4-5|FRAS1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3154479861259	3	418.869374	1253.58629	1.0019	0.00041968	4.2995	0.0018009	5.3015	0.0022206	418.8705176499547	22.911	0.17904	23.144	23.04	23.219	0.23306					7	5	2	0	0	0	0.11944	1	9544	9544		0.96228	0.18574	1	156070			40074	2853	19706	19789	46421	46421					-0.030357308597558585
VSAAAAAH	8	Unmodified	_VSAAAAAH_					0	0	0			REV__PTGER4|p.R304Efs*17|1|0.13|ENSG00000171522|chr5:40691821-40691821|C/-|frameshift_variant	REV__PTGER4|p.R304Efs*17|1|0.13|ENSG00000171522|chr5:40691821-40691821|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.1858703494072	2	349.18502	696.355488	2.8005	0.0009779	-1.1049	-0.0003858	1.6957	0.0005921	349.1850026498048	102.72	0.1292	102.9	102.83	102.96	0.18066					8	4	3	0	0	0	0.89198	1	43231	43231		0	0	1	8661600	+		40075	11032	19707	19790	46422	46422					-0.004835710594420561
VSAAAGGA	8	Unmodified	_VSAAAGGA_					0	0	0			REV__ENSG00000183114|ENST00000332947|FAM43B	REV__ENSG00000183114|ENST00000332947|FAM43B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	603.3076660037041	1	603.309666	602.30239	1.5704	0.00094742	-4.251	-0.0025647	-2.6806	-0.0016173	603.3066952456109	104.65	0.097557	104.65	104.6	104.7	0					7	4	2	0	0	0	0.89198	1	44245	44245		0	0	1	16676000	+		40076	11376	19708	19791	46423	46423					-0.014669488421077403
VSAALVILS	9	Unmodified	_VSAALVILS_					0	0	0		nc|ENSG00000129493|Q86XA9-2|HEATR5A;nc|ENSG00000129493|Q86XA9|HEATR5A;ENSG00000129493|ENST00000543095|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	nc|ENSG00000129493|Q86XA9-2|HEATR5A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	872.5464355349541	1	872.545145	871.537869	1.8191	0.0015873	-0.31291	-0.00027303	1.5062	0.0013142	872.544802912415	78.347	0.41131	78.657	78.453	78.864	0.30933					28	12	3	0	0	0	0.059546	1	32817	32817		64.236	0	1	4559400			40077	2405	19709	19792	46424	46424					0.09696143562666748
VSAHEMDL	8	Unmodified	_VSAHEMDL_					0	0	0		L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|62|3|anti-sense	L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|62|3|anti-sense	L1P2_dup1497|chr19:20226195-20227139:-|1.0833442391613386|0.1594826865315493|2.76|428.0|62|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1421386599541	3	301.140982	900.401117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.14	1	115.29	114.79	115.79	0.14976								0	0	0	1.0178	1	49797	49797		1.8442	0	1				40078	7724	19710	19793	46425	46425					-0.05306713659365414
VSAIKRNR	8	Unmodified	_VSAIKRNR_					0	0	0			REV__ENST00000371021.4_1_10:99080110-99080479:+|nuORF	REV__ENST00000371021.4_1_10:99080110-99080479:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	472.2940551638603	2	472.293425	942.572297	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.644	1	99.717	99.217	100.22	0.072716								0	0	0	1.0178	1	41722	41722		2.5775	0	1		+		40079	12668	19711	19794	46426	46426					0.0987140449412891
VSAKAKPP	8	Unmodified	_VSAKAKPP_					0	0	0			REV__ENSG00000135931|ENST00000611582|ARMC9	REV__ENSG00000135931|ENST00000611582|ARMC9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2473327517509	2	399.247621	796.480688	0.59239	0.00023651	-1.0097	-0.00040313	-0.41733	-0.00016662	399.2473560083675	62.431	0.93277	62.431	61.993	62.926	0					58	29	4	0	0	0	0.89051	1	26075	26075		2.3027	0	1	8393800	+		40080	9964	19712	19795	46427	46427					0.07430721076946156
VSAKAKPP	8	Unmodified	_VSAKAKPP_					0	0	0			REV__ENSG00000135931|ENST00000611582|ARMC9	REV__ENSG00000135931|ENST00000611582|ARMC9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2467224001884	2	399.247621	796.480688	2.5812	0.0010305	-0.29881	-0.0001193	2.2824	0.00091122	399.247729179897	61.281	1.2447	62.699	62.375	63.619	1.4177					62	39	3	0	0	0	0.89051	1	25760	25760		2.3027	0	1	9607700	+		40081	9964	19712	19795	46428	46428					0.07430721076946156
VSAKAKPP	8	Unmodified	_VSAKAKPP_					0	0	0			REV__ENSG00000135931|ENST00000611582|ARMC9	REV__ENSG00000135931|ENST00000611582|ARMC9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2487670779228	2	399.247621	796.480688	2.7519	0.0010987	-1.6462	-0.00065726	1.1056	0.00044141	399.24715093882276	60.87	1.0846	62.835	62.324	63.409	1.9653					57	34	3	0	0	0	0.89051	3	25484	25484;25537;25591		2.3027	0	1	7556300	+		40082	9964	19712	19795	46429;46430;46431	46429					0.07430721076946156
VSALKKKK	8	Unmodified	_VSALKKKK_					0	0	0		ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.3147765994072	2	451.313295	900.612037	3.3065	0.0014923	-1.4693	-0.00066312	1.8372	0.00082917	451.31247810134533	107.76	0.23506	107.81	107.71	107.95	0.052444					42	12	5	0	0	0	0.89008	1	46149	46149		2.5775	0	1	506480000			40083	5587	19713	19796	46432	46432					0.15775531444842272
VSALKKKK	8	Unmodified	_VSALKKKK_					0	0	0		ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.3145934939384	2	451.313295	900.612037	3.3623	0.0015174	-0.71115	-0.00032095	2.6511	0.0011965	451.3128443025328	106.15	0.28292	106.31	106.23	106.51	0.15781					40	14	5	0	0	0	0.89008	2	45378	45378;45455		2.5775	0	1	472790000			40084	5587	19713	19796	46433;46434	46433					0.15775531444842272
VSALKKKK	8	Unmodified	_VSALKKKK_					0	0	0		ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	451.3148071169853	2	451.313295	900.612037	3.3623	0.0015174	-1.4172	-0.00063959	1.9451	0.00087785	451.31234938224236	107.75	0.20123	107.91	107.79	107.99	0.15781					26	10	4	0	0	0	0.89008	1	46390	46390		2.5775	0	1	556280000			40085	5587	19713	19796	46435	46435					0.15775531444842272
VSALKKKK	8	Unmodified	_VSALKKKK_					0	0	0		ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	ENST00000252804.8_1_2:1636874-1637096:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	451.3139831423759	2	451.313295	900.612037	3.4325	0.0015491	-1.1631	-0.00052493	2.2694	0.0010242	451.3126659571384	106.14	0.27328	106.3	106.19	106.46	0.16174					41	14	5	0	0	0	0.89008	2	45297	45297;45375		2.5775	0	1	622470000			40086	5587	19713	19796	46436;46437	46436					0.15775531444842272
VSAVPLLLG	9	Unmodified	_VSAVPLLLG_					0	0	0		ENST00000523562.5_1_16:67203334-67203685:+|nuORF	ENST00000523562.5_1_16:67203334-67203685:+|nuORF	ENST00000523562.5_1_16:67203334-67203685:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.8827697634697	2	434.778754	867.542954	0.78746	0.00034237	2.8386	0.0012342	3.6261	0.0015765	434.7799176886339	18.561	0.58862	19.54	19.369	19.957	0.97922					38	20	3	0	0	0	0.11957	1	7885	7885		0	0	1	3122200			40087	7101	19714	19797	46438	46438					0.10388447425305003
VSCSELWCGCQ	11	Unmodified	_VSCSELWCGCQ_					0	0	0			REV__ENST00000592777.1_1_18:44027519-44030266:+|nuORF	REV__ENST00000592777.1_1_18:44027519-44030266:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1214.462329089642	1	1214.46388	1213.4566	-0.048082	-5.8394E-05	-2.8686	-0.0034839	-2.9167	-0.0035423	1214.461844276913	34.977	0.057663	36.252	36.204	36.262	1.2746					5	4	2	0	0	0	0.96769	1	14686	14686		5.7319	1.7875	1	13544000	+		40088	14079	19715	19798	46439	46439					-0.14158991525528108
VSCSELWCGCQ	11	Unmodified	_VSCSELWCGCQ_					0	0	0			REV__ENST00000592777.1_1_18:44027519-44030266:+|nuORF	REV__ENST00000592777.1_1_18:44027519-44030266:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1214.46388	1213.4566	-0.048082	-5.8394E-05	-2.8686	-0.0034839	-2.9167	-0.0035423	1214.461844276913	34.977	0.057663	36.252	36.204	36.262	1.2746	0	0	NaN	5.7319	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13544000	+		40089	14079	19715	19798							-0.14158991525528108
VSDDRWEEV	9	Unmodified	_VSDDRWEEV_					0	0	0		ENST00000482445.5_1_18:74701791-74728973:-|nuORF	ENST00000482445.5_1_18:74701791-74728973:-|nuORF	ENST00000482445.5_1_18:74701791-74728973:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7568237185478	2	567.756735	1133.49892	4.1375	0.0023491	-2.0579	-0.0011684	2.0796	0.0011807	567.7546982710516	95.038	0.311	95.779	95.613	95.924	0.74124					28	11	3	0	0	0	0.55689	1	39999	39999		13.042	1.4022	1	3729000			40090	6835	19716	19799	46440	46440					-0.062492335296838064
VSDEDFYLF	9	Unmodified	_VSDEDFYLF_					0	0	0			REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.7547485232353	2	567.75313	1133.49171	4.1376	0.0023491	4.2923	0.0024369	8.4298	0.0047861	567.7546982710516	95.038	0.311	95.779	95.613	95.924	0.74124					28	11	3	0	0	0	0.49082	1	39957	39957		15.847	1.9411	1	3729000	+		40091	14982	19717	19800	46441	46441					-0.06969966130100147
VSDEDFYLF	9	Unmodified	_VSDEDFYLF_					0	0	0			REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	567.75313	1133.49171	2.5946	0.0014731	6.6013	0.0037479	9.1959	0.005221	567.756487393461	95.649	0.26168	95.772	95.622	95.883	0.12331	-0.036418	0.0016434	NaN	15.847	26	8	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2623200	+		40092	14982	19717	19800							-0.06969966130100147
VSDEDFYLF	9	Unmodified	_VSDEDFYLF_					0	0	0			REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	REV__tr|A0A553SLD9|A0A553SLD9_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_20440PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	567.75313	1133.49171	3.2856	0.0018654	5.2484	0.0029798	8.534	0.0048452	567.7554369926354	94.569	0.36611	95.758	95.59	95.957	1.1887	-0.050497	0.00010716	NaN	15.847	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4245700	+		40093	14982	19717	19800							-0.06969966130100147
VSDGTVNK	8	Unmodified	_VSDGTVNK_					0	0	0		ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	ENSG00000038295|ENST00000061240|TLL1	MSMS	GG20161007_CRH_Patient100_W632_02	4	410.2311889529228	2	410.213975	818.413397	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.925	1	13.753	13.253	14.253	0.82789								0	0	0	1.0178	1	5360	5360		15.847	0	1				40094	653	19718	19801	46442	46442					-0.0030735392466567646
VSDKKLRL	8	Unmodified	_VSDKKLRL_					0	0	0			REV__tr|A0A7D6VMM6|A0A7D6VMM6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15980PE=4SV=1	REV__tr|A0A7D6VMM6|A0A7D6VMM6_9CLOTRadicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15980PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	320.2063171267509	3	320.206315	957.597115	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.027	1	85.215	84.715	85.715	1.1879								0	0	0	1.0178	1	35261	35261		0.40072	0	1		+		40095	15318	19719	19802	46443	46443					0.11662039576845018
VSDPLIGG	8	Unmodified	_VSDPLIGG_					0	0	0		ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	ENSG00000169359|ENST00000643144|SLC33A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.2091552615166	2	379.208161	756.401769	1.2878	0.00048834	1.3425	0.00050907	2.6303	0.00099742	379.20857232077435	34.787	0.37213	35.086	34.867	35.239	0.29942					47	20	3	0	0	0	0.89178	1	14655	14655		0.69038	0	1	24298000			40096	4085	19720	19803	46444	46444					0.013824490520164545
VSDPLLLPV	9	Unmodified	_VSDPLLLPV_					0	0	0			REV__ENST00000321367.7_1_16:30389472-30389706:-|nuORF	REV__ENST00000321367.7_1_16:30389472-30389706:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1962768435478	3	318.195304	951.564084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.088	1	56.409	55.909	56.909	0.32088								0	0	0	0.42693	1	23496	23496		0	0	1		+		40097	12408	19721	19804	46445	46445					0.08636412734153964
VSDWKILVF	9	Unmodified	_VSDWKILVF_					0	0	0		ENST00000254190.3_1_15:101718835-101718877:-|nuORF	ENST00000254190.3_1_15:101718835-101718877:-|nuORF	ENST00000254190.3_1_15:101718835-101718877:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8212768435478	2	553.815867	1105.61718	3.0972	0.0017153	0.38426	0.00021281	3.4815	0.0019281	553.8159976746151	82.303	0.68089	83.973	83.766	84.447	1.67					54	21	4	0	0	0	0.12251	1	34494	34494		41.84	9.0539	1	8075800			40098	5593	19722	19805	46446	46446					0.06859790516796238
VSEHIWEVL	9	Unmodified	_VSEHIWEVL_					0	0	0		ENST00000495415.5_1_10:99221527-99223714:-|nuORF;ENST00000478452.1_1_10:99221527-99222458:-|nuORF	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	ENST00000495415.5_1_10:99221527-99223714:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	556.2941161990166	2	556.292756	1110.57096	1.4155	0.00078743	-0.36796	-0.0002047	1.0475	0.00058273	556.292505548856	93.218	0.41209	93.218	93.076	93.488	0					22	12	3	0	0	0	0.85019	1	38981	38981		0.52476	0	1	695480			40099	6946	19723	19806	46447	46447					0.02009725614720992
VSEPIDDLD	9	Unmodified	_VSEPIDDLD_					0	0	0			REV__tr|A0A553SKA6|A0A553SKA6_NIACILonproteaseOS=NialliacirculansOX=1397GN=lonPE=2SV=1	REV__tr|A0A553SKA6|A0A553SKA6_NIACILonproteaseOS=NialliacirculansOX=1397GN=lonPE=2SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	334.8256713747978	3	334.825717	1001.45532	1.5139	0.00050688	-1.6714	-0.00055963	-0.15755	-5.275E-05	334.8251054371019	80.734	0.41914	81.967	81.742	82.161	1.2332					34	13	3	0	0	0	0.3091	1	33894	33894		24.991	4.5764	1	7038400	+		40100	14941	19724	19807	46448	46448					-0.045348430268063566
VSEPRYFQL	9	Unmodified	_VSEPRYFQL_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57566845-57568278:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8018676638603	2	569.798206	1137.58186	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.641	1	47.016	46.516	47.516	1.3751								0	0	0	0.081361	1	19119	19119		38.176	11.907	1				40101	1324	19725	19808	46449	46449					0.018571279890011283
VSEPRYFQL	9	Unmodified	_VSEPRYFQL_					0	0	0		ENSG00000101158|ENST00000652272|NELFCD;nc|ENSG00000101158|Q8IXH7|NELFCD;ENST00000474543.5_1_20:57564608-57568882:+|nuORF;ENST00000478389.5_1_20:57566845-57568278:+|nuORF	ENSG00000101158|ENST00000652272|NELFCD	ENSG00000101158|ENST00000652272|NELFCD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8003417849541	2	569.798206	1137.58186	1.7882	0.0010189	1.8991	0.0010821	3.6874	0.0021011	569.7993396170064	45.075	0.2482	47.035	46.928	47.176	1.9596					17	7	3	0	0	0	0.11669	1	18920	18920		43.772	7.2662	1	1089600			40102	1324	19725	19808	46450	46450					0.018571279890011283
VSFCTDMD	8	Unmodified	_VSFCTDMD_					0	0	0		chr19:18435415-18435563|230|91.19|0.02|12.43|-|1|None,ISYNA1|1;ENST00000582287.6_1_19:18545725-18546537:-|nuORF;nc|ENSG00000105655|Q9NPH2-2|ISYNA1;ENST00000577820.5_1_19:18545725-18548921:-|nuORF;nc|ENSG00000105655|Q9NPH2-3|ISYNA1;ENSG00000105655|ENST00000338128|ISYNA1	chr19:18435415-18435563|230|91.19|0.02|12.43|-|1|None,ISYNA1|1	chr19:18435415-18435563|230|91.19|0.02|12.43|-|1|None,ISYNA1|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1723815798759	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.822	1	32.637	32.137	33.137	1.8151								0	0	0	1.0178	1	12920	12920		2.5775	0	1				40103	227	19726	19809	46451	46451					-0.1308575503933298
VSFFDLDI	8	Unmodified	_VSFFDLDI_					0	0	0			REV__ENSG00000082213|ENST00000325366|C5orf22	REV__ENSG00000082213|ENST00000325366|C5orf22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1640807986259	3	319.163893	954.469849	2.2151	0.00070697	-0.33822	-0.00010795	1.8768	0.00059902	319.1635876248202	59.676	0.45298	61.645	61.405	61.857	1.969					26	14	3	0	0	0	0.87701	1	25033	25033		10.824	0	1	1597000	+		40104	8824	19727	19810	46452	46452					-0.009207260880089052
VSFGGFLLCI	10	Unmodified	_VSFGGFLLCI_					0	0	0		OPN1SW|p.N142Qfs*37|1|0.04|ENSG00000128617|chr7:128775084-128775085|-/A|frameshift_variant;ENSG00000128617|ENST00000249389|OPN1SW	OPN1SW|p.N142Qfs*37|1|0.04|ENSG00000128617|chr7:128775084-128775085|-/A|frameshift_variant	OPN1SW|p.N142Qfs*37|1|0.04|ENSG00000128617|chr7:128775084-128775085|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2874633669853	2	528.283346	1054.55214	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.856	1	54.825	54.325	55.325	1.9697								0	0	0	0.64435	1	22142	22142		19.257	0	1				40105	2377	19728	19811	46453	46453					0.027044727193015206
VSFREIVV	8	Unmodified	_VSFREIVV_					0	0	0		ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	474.7802307009697	2	474.779285	947.544017	1.9277	0.00091524	0.56935	0.00027032	2.4971	0.0011856	474.77949810681383	46.503	0.37094	47.878	47.712	48.083	1.3751					30	11	3	0	0	0	0.47299	1	19509	19509		49.554	14.622	1	5255700			40106	1784	19729	19812	46454	46454					0.06814661794192034
VSFREIVV	8	Unmodified	_VSFREIVV_					0	0	0		ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	ENSG00000112379|ENST00000251691|ARFGEF3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	474.779285	947.544017	1.4711	0.00069844	0.55394	0.000263	2.025	0.00096144	474.77957216857504	46.052	0.36691	48.022	47.852	48.219	1.9703	0.072271	-7.8036E-06	NaN	49.554	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4928300			40107	1784	19729	19812							0.06814661794192034
VSGAGHAG	8	Unmodified	_VSGAGHAG_					0	0	0			REV__nc|ENSG00000149182|Q8N6H7-3|ARFGAP2	REV__nc|ENSG00000149182|Q8N6H7-3|ARFGAP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1602050662041	2	328.161545	654.308538	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.094	1	14.932	14.432	15.432	0.83814								0	0	0	1.0178	1	5845	5845		0.79363	0.79363	1		+		40108	8133	19730	19813	46455	46455					-0.0324443061057309
VSGGKLVR	8	Unmodified	_VSGGKLVR_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.2595092654228	2	408.25852	814.502486	2.8475	0.0011625	1.0809	0.00044129	3.9284	0.0016038	408.25882695115524	104.47	0.18761	104.63	104.53	104.71	0.16055					13	9	2	0	0	0	0.89051	1	44259	44259		2.3027	0	1	59435000	+		40109	11008	19731	19814	46456	46456					0.08781525825531844
VSGGKLVR	8	Unmodified	_VSGGKLVR_					0	0	0			REV__ENSG00000171094|ENST00000389048|ALK	REV__ENSG00000171094|ENST00000389048|ALK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	408.25852	814.502486	2.8475	0.0011625	1.0809	0.00044129	3.9284	0.0016038	408.25882695115524	104.47	0.18761	104.63	104.53	104.71	0.16055	0.019806	0.0008294	NaN	2.3027	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	59435000	+		40110	11008	19731	19814							0.08781525825531844
VSGIIDTVET	10	Unmodified	_VSGIIDTVET_					0	0	0			REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	517.5856201052666	2	517.274229	1032.53391	1.0354	0.00053559	-0.61899	-0.00032019	0.41642	0.0002154	517.2737307594352	19.461	0.3689	19.461	19.266	19.634	0					19	11	2	0	0	0	0.089654	1	8091	8091		56.177	6.244	1	3287500	+		40111	15524	19732	19815	46457	46457					0.018940092782941065
VSGIIDTVET	10	Unmodified	_VSGIIDTVET_					0	0	0			REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	REV__tr|A0A7D6VUZ9|A0A7D6VUZ9_9CLOTMethyl-acceptingtransducerdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_08975PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	517.5867797732353	2	517.274229	1032.53391	0.69363	0.0003588	1.2471	0.00064511	1.9408	0.0010039	517.2746685667842	19.087	0.3712	19.28	19.078	19.449	0.19342					26	11	3	0	0	0	0.1179	1	7879	7879		41.84	7.4379	1	3716800	+		40112	15524	19732	19815	46458	46458					0.018940092782941065
VSGIVFVMII	10	Unmodified	_VSGIVFVMII_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	539.7843505740166	2	539.322471	1076.63039	1.9378	0.0010451	-1.4243	-0.00076814	0.51353	0.00027696	539.3200188219205	78.104	0.27809	79.855	79.654	79.932	1.7514					13	8	2	0	0	0	0.1245	1	32673	32673		10.824	2.2306	1	525640	+		40113	14331	19733	19816	46459	46459					0.09513905304561376
VSGIVFVMII	10	Unmodified	_VSGIVFVMII_					0	0	0			REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	REV__L1PA7_dup7105|chr8:140902960-140905176:-|1.928403484305532|0.1763547852274372|3.45|429.0|127|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	539.322471	1076.63039	1.8227	0.00098304	1.5292	0.00082474	3.3519	0.0018078	539.8259387208226	79.592	0.15988	79.892	79.782	79.942	0.30047	0.018257	0.0011409	NaN	10.824	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	269040	+		40114	14331	19733	19816							0.09513905304561376
VSGLGAGV	8	Unmodified	_VSGLGAGV_					0	0	0			REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	330.1905700564384	2	330.189771	658.36499	0.34864	0.00011512	2.2764	0.00075163	2.625	0.00086674	330.1904434891683	26.71	0.42785	26.971	26.712	27.14	0.26173					27	13	3	0	0	0	0.89176	1	11146	11146		0.79363	0	1	4163200	+		40115	13572	19734	19817	46460	46460					0.02214197226101078
VSGLGAGV	8	Unmodified	_VSGLGAGV_					0	0	0			REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	330.1898681521416	2	330.189771	658.36499	0.037591	1.2412E-05	1.2149	0.00040114	1.2525	0.00041355	330.18996146497955	25.591	0.24545	26.85	26.741	26.987	1.2594					18	7	3	0	0	0	0.89176	1	10721	10721		0.79363	0	1	3133600	+		40116	13572	19734	19817	46461	46461					0.02214197226101078
VSGLGAGV	8	Unmodified	_VSGLGAGV_					0	0	0			REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	330.189771	658.36499	0.34864	0.00011512	2.2764	0.00075163	2.625	0.00086674	330.1904434891683	26.71	0.42785	26.971	26.712	27.14	0.26173	0.043217	0.00044189	NaN	0.79363	27	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4163200	+		40117	13572	19734	19817							0.02214197226101078
VSGLGAGV	8	Unmodified	_VSGLGAGV_					0	0	0			REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	330.189771	658.36499	0.037591	1.2412E-05	1.2149	0.00040114	1.2525	0.00041355	330.18996146497955	25.591	0.24545	26.85	26.741	26.987	1.2594	-0.078219	-0.0002591	NaN	0.79363	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3133600	+		40118	13572	19734	19817							0.02214197226101078
VSGLGAGV	8	Unmodified	_VSGLGAGV_					0	0	0			REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	REV__ENST00000511309.5_1_5:176730986-176733129:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	330.189771	658.36499	0.059085	1.9509E-05	0.20101	6.637E-05	0.26009	8.588E-05	330.18928882312093	25.246	0.30169	26.963	26.818	27.119	1.7167	0.035002	-0.00092863	NaN	0.79363	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2411900	+		40119	13572	19734	19817							0.02214197226101078
VSGLLCICSLC	11	Unmodified	_VSGLLCICSLC_					0	0	0			REV__ENSG00000167992|ENST00000335613|VWCE	REV__ENSG00000167992|ENST00000335613|VWCE	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	556.3250610232353	2	555.771431	1109.52831	2.8309	0.0015733	3.9861	0.0022153	6.8169	0.0037887	556.2745417817026	62.491	0.52758	64.435	64.224	64.752	1.9444					43	16	4	0	0	0	0.14187	1	26201	26201		17.113	1.2657	1	3830200	+		40120	10890	19735	19818	46462	46462					-0.02207452101038143
VSGLLLSLQ	9	Unmodified	_VSGLLLSLQ_					0	0	0		ENST00000550043.1_1_14:28734339-28734417:+|nuORF	ENST00000550043.1_1_14:28734339-28734417:+|nuORF	ENST00000550043.1_1_14:28734339-28734417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	465.2874938845634	2	465.286943	928.559333	2.1585	0.0010043	-0.31871	-0.00014829	1.8398	0.00085602	465.28683369647035	65.178	0.98827	65.178	64.881	65.87	0					86	30	5	0	0	0	0.10993	2	27284	27284;27355		46.021	6.0636	1	63578000			40121	7258	19736	19819	46463;46464	46463					0.09219528591370363
VSGLLLSLQ	9	Unmodified	_VSGLLLSLQ_					0	0	0		ENST00000550043.1_1_14:28734339-28734417:+|nuORF	ENST00000550043.1_1_14:28734339-28734417:+|nuORF	ENST00000550043.1_1_14:28734339-28734417:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.2883483767509	2	465.286943	928.559333	2.6075	0.0012132	-0.54231	-0.00025233	2.0652	0.00096091	465.28707194913125	62.915	1.0932	64.86	64.597	65.69	1.9444					95	34	5	0	0	0	0.091139	1	26537	26537		52.268	8.4101	1	196070000			40122	7258	19736	19819	46465	46465					0.09219528591370363
VSGRWRRRWQR	11	Unmodified	_VSGRWRRRWQR_					0	0	0		ENST00000370008.3_1_1:109289315-109289390:+|nuORF	ENST00000370008.3_1_1:109289315-109289390:+|nuORF	ENST00000370008.3_1_1:109289315-109289390:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1543.608813464642	1	1542.86251	1541.85523	1.3524	0.0020866	2.8764	0.0044379	4.2288	0.0065245	1542.867739549431	43.324	0.17662	44.677	44.619	44.795	1.3536					8	5	2	0	0	0	1.0362	2	18153	18153;18179		1.3295	1.3295	1	1849800			40123	6104	19737	19820	46466;46467	46466					0.10597588942437142
VSHGREIL	8	Unmodified	_VSHGREIL_					0	0	0		ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	ENSG00000181378|ENST00000341552|CFAP65	MSMS	GG20161007_CRH_Patient100_W632_01	3	304.1768066287041	3	304.175015	909.503215	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.81	1	101.99	101.49	102.49	0.17032								0	0	0	1.0178	1	42838	42838		0.45834	0	1				40124	4574	19738	19821	46468	46468					0.044843204745689036
VSHRDVHK	8	Unmodified	_VSHRDVHK_					0	0	0			REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	REV__ENST00000602717.5_1_14:77743417-77745166:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	327.0079223513603	3	326.51403	976.520262	-0.31054	-0.00010139	3.9294	0.001283	3.6189	0.0011816	326.51536990754056	15.105	0.24941	15.218	15.101	15.35	0.11295					10	7	2	0	0	0	2.3239	1	6249	6249		0.35063	0	1	259710	+		40125	14122	19739	19822	46469	46469					0.031062410803770035
VSIAEIKD	8	Unmodified	_VSIAEIKD_					0	0	0			REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	874.4904052615166	1	874.488024	873.480748	1.9307	0.0016884	-0.77089	-0.00067414	1.1598	0.0010143	874.4876016819449	63.876	0.33353	63.876	63.713	64.046	0					17	10	2	0	0	0	0.39757	1	26618	26618		54.774	0	1	1271300	+		40126	14572	19740	19823	46470	46470					0.03894676286267895
VSIAEIKD	8	Unmodified	_VSIAEIKD_					0	0	0			REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	874.488024	873.480748	1.9307	0.0016884	-0.77089	-0.00067414	1.1598	0.0010143	874.4876016819449	63.876	0.33353	63.876	63.713	64.046	0	0.097714	-0.00012263	NaN	54.774	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1271300	+		40127	14572	19740	19823							0.03894676286267895
VSIAEIKD	8	Unmodified	_VSIAEIKD_					0	0	0			REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	874.488024	873.480748	1.946	0.0017018	0.19442	0.00017002	2.1404	0.0018718	874.4883245291759	63.443	0.3135	63.772	63.598	63.912	0.32899	-0.0065768	0.00072153	NaN	54.774	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1219300	+		40128	14572	19740	19823							0.03894676286267895
VSIAEIKD	8	Unmodified	_VSIAEIKD_					0	0	0			REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	874.488024	873.480748	2.7946	0.0024438	-0.34959	-0.00030571	2.445	0.0021381	874.4873294962629	62.314	0.31693	63.731	63.556	63.873	1.4177	-0.047188	0.00024579	NaN	54.774	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1289400	+		40129	14572	19740	19823							0.03894676286267895
VSIAEIKD	8	Unmodified	_VSIAEIKD_					0	0	0			REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	REV__nc|ENSG00000290796|A4QPB2-2|LRP5L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	874.488024	873.480748	2.5863	0.0022617	-1.6744	-0.0014643	0.9119	0.00079744	874.4867897897707	61.777	0.28325	63.735	63.594	63.877	1.9571	-0.043949	-0.00091276	NaN	54.774	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1241400	+		40130	14572	19740	19823							0.03894676286267895
VSIAGRRQ	8	Unmodified	_VSIAGRRQ_					0	0	0			REV__ENST00000501008.2_1_12:92540095-92540353:+|nuORF	REV__ENST00000501008.2_1_12:92540095-92540353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.7657043337822	2	443.764501	885.514448	3.7334	0.0016568	-1.1971	-0.00053122	2.5363	0.0011255	443.7638447199824	73.84	0.81561	75.158	74.654	75.469	1.318					52	25	3	0	0	0	0.89178	1	30956	30956		0.69038	0	1	8790900	+		40131	13505	19741	19824	46471	46471					0.0671114256869032
VSIALTGKP	9	Unmodified	_VSIALTGKP_					0	0	0		ENSG00000128815|ENST00000325239|WDFY4	ENSG00000128815|ENST00000325239|WDFY4	ENSG00000128815|ENST00000325239|WDFY4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	443.2731506228447	2	443.273835	884.533118	1.2975	0.00057513	-2.5971	-0.0011512	-1.2997	-0.00057611	443.2725673295442	69.07	0.5583	69.07	68.768	69.326	0					40	17	3	0	0	0	0.83753	1	28739	28739		1.8442	0	1	9058700			40132	2384	19742	19825	46472	46472					0.08623259419891838
VSIFPPHV	8	Unmodified	_VSIFPPHV_					0	0	0		ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	448.2559081912041	2	448.255446	894.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.91	1	87.91	87.41	88.41	0								0	0	0	1.0178	1	36746	36746		0.79363	0	1				40133	6704	19743	19826	46473	46473					0.04487007593991166
VSIFPPHV	8	Unmodified	_VSIFPPHV_					0	0	0		ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	448.2555114626884	2	448.255446	894.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.5	1	87.735	87.235	88.235	0.23471								0	0	0	1.0178	1	36689	36689		0.79363	0	1				40134	6704	19743	19826	46474	46474					0.04487007593991166
VSIFPPHV	8	Unmodified	_VSIFPPHV_					0	0	0		ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	ENST00000466127.1_1_1:226109155-226109632:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2556030154228	2	448.255446	894.496338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.79	1	103.95	103.45	104.45	0.16055								0	0	0	1.0178	1	43834	43834		0.79363	0	1				40135	6704	19743	19826	46475	46475					0.04487007593991166
VSIKSELKRRQ	11	Unmodified	_VSIKSELKRRQ_					0	0	0		tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	672.4097778201103	2	672.409518	1342.80448	2.5354	0.0017048	-0.91797	-0.00061725	1.6174	0.0010876	672.4088403979092	83.537	2.3909	83.537	82.677	85.068	0					147	76	2	0	0	0	1.039	4	34680	34680;34938;35006;35165		0.30703	0.03801	1	4004900			40136	16839	19744	19827	46476;46477;46478;46479	46476					0.14679202054207963
VSIKSELKRRQ	11	Unmodified	_VSIKSELKRRQ_					0	0	0		tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4096557497978	2	672.409518	1342.80448	1.9383	0.0013033	-1.006	-0.00067642	0.93236	0.00062693	672.408867948159	81.206	1.355	81.497	80.561	81.916	0.29056					107	43	3	0	0	0	1.039	3	33946	33946;33998;34089		0.30703	0.03801	1	2380900			40137	16839	19744	19827	46480;46481;46482	46480					0.14679202054207963
VSIKSELKRRQ	11	Unmodified	_VSIKSELKRRQ_					0	0	0		tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	672.4098998904228	2	672.409518	1342.80448	2.3022	0.001548	-0.29196	-0.00019632	2.0103	0.0013517	672.4092482135173	83.339	1.8454	83.609	83.337	85.183	0.27029					130	58	4	0	0	0	1.0362	5	34868	34868;35024;35186;35238;35380		0.30703	0.03801	1	4562300			40138	16839	19744	19827	46483;46484;46485;46486;46487	46483					0.14679202054207963
VSIPPKKKQVI	11	Unmodified	_VSIPPKKKQVI_					0	0	0		nc|ENSG00000144331|Q569K4-3|ZNF385B;nc|ENSG00000144331|Q569K4-2|ZNF385B;nc|ENSG00000144331|Q569K4-5|ZNF385B;nc|ENSG00000144331|Q569K4|ZNF385B;ENSG00000144331|ENST00000410066|ZNF385B	nc|ENSG00000144331|Q569K4-3|ZNF385B	nc|ENSG00000144331|Q569K4-3|ZNF385B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.9069091677666	2	618.905548	1235.79654	2.8744	0.001779	-1.7407	-0.0010773	1.1337	0.00070162	618.9044088530143	107.38	0.22867	107.53	107.41	107.64	0.15781					41	11	5	0	0	0	1.0362	1	46143	46143		1.3295	0.13619	1	427610000			40139	3069	19745	19828	46488	46488					0.18807674804747876
VSKLRPSL	8	Unmodified	_VSKLRPSL_					0	0	0			REV__chr12:49992655-49993968|113|18.58|0.25|6.19|-|0|TE_info:AluSc8,AluSc8_dup14620,Alu,SINE,donor,+,49993968,49994071|RACGAP1,None|1	REV__chr12:49992655-49993968|113|18.58|0.25|6.19|-|0|TE_info:AluSc8,AluSc8_dup14620,Alu,SINE,donor,+,49993968,49994071|RACGAP1,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	450.2531921267509	2	450.287277	898.560001	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.799	1	49.775	49.275	50.275	1.976								0	0	0	1.0178	1	20019	20019		16.942	5.302	1		+		40140	8249	19746	19829	46489	46489					0.10666368031081674
VSKQRRIEPLG	11	Unmodified	_VSKQRRIEPLG_					0	0	0			REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	REV__nc|ENSG00000122591|Q9BYI3-3|HYCC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8851196169853	2	641.883136	1281.75172	1.4898	0.00095626	0.79491	0.00051024	2.2847	0.0014665	641.8838270268691	77.925	1.6654	79.677	79.073	80.738	1.7514					106	53	3	0	0	0	1.0131	1	32697	32697		2.9952	0	1	2328100	+		40141	14420	19747	19830	46490	46490					0.12211243991396259
VSKRATKSK	9	Unmodified	_VSKRATKSK_					0	0	0			REV__nc|ENSG00000113448|Q08499-7|PDE4D	REV__nc|ENSG00000113448|Q08499-7|PDE4D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8146545290947	2	502.81419	1003.61383	2.0321	0.0010218	-1.571	-0.0007899	0.46113	0.00023186	502.8134541028111	81.541	1.0218	81.541	81.133	82.154	0					97	33	5	0	0	0	0.85403	1	34000	34000		0	0	1	265370000	+		40142	14411	19748	19831	46491	46491					0.11216540462783087
VSKRATKSK	9	Unmodified	_VSKRATKSK_					0	0	0			REV__nc|ENSG00000113448|Q08499-7|PDE4D	REV__nc|ENSG00000113448|Q08499-7|PDE4D	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	502.8147765994072	2	502.81419	1003.61383	2.536	0.0012751	-1.5571	-0.00078294	0.97886	0.00049219	502.8135007896727	81.37	1.1933	81.661	81.183	82.376	0.29056					105	38	5	0	0	0	0.85403	1	34058	34058		0	0	1	287870000	+		40143	14411	19748	19831	46492	46492					0.11216540462783087
VSKRATKSK	9	Unmodified	_VSKRATKSK_					0	0	0			REV__nc|ENSG00000113448|Q08499-7|PDE4D	REV__nc|ENSG00000113448|Q08499-7|PDE4D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	502.8154174685478	2	502.81419	1003.61383	2.7388	0.0013771	-0.68137	-0.0003426	2.0575	0.0010345	502.8138803583458	80.494	1.0726	81.745	81.048	82.12	1.2512					94	34	5	0	0	0	0.85403	2	33750	33750;33800		0	0	1	165570000	+		40144	14411	19748	19831	46493;46494	46493					0.11216540462783087
VSKRCVRK	8	Unmodified	_VSKRCVRK_					0	0	0			REV__ENST00000358537.7_1_3:58090811-58090913:+|nuORF	REV__ENST00000358537.7_1_3:58090811-58090913:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2976867556572	2	488.297653	974.580753	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.362	1	17.513	17.013	18.013	0.15093								0	0	0	1.0178	1	7202	7202		2.5775	0	1		+		40145	12574	19749	19832	46495	46495					0.0924463513910041
VSKRHVQNPL	10	Unmodified	_VSKRHVQNPL_					0	0	0			REV__ENST00000477238.1_1_22:19707079-19707537:+|nuORF	REV__ENST00000477238.1_1_22:19707079-19707537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3446533083916	2	589.343646	1176.67274	2.8028	0.0016518	-1.5598	-0.00091927	1.2429	0.00073252	589.3424328799648	73.443	1.6816	75.239	74.56	76.242	1.7962					102	53	3	0	0	0	0.85124	1	31011	31011		6.7232	1.9672	1	2043500	+		40146	9254	19750	19833	46496	46496					0.09147016757151505
VSLAIVLIAT	10	Unmodified	_VSLAIVLIAT_					0	0	0		tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3269531130791	2	500.326068	998.637583	1.1192	0.00055995	0.67997	0.00034021	1.7991	0.00090016	500.3257319147096	106.14	0.44993	106.14	106.03	106.48	0					44	21	5	0	0	0	0.89803	1	45199	45199		1.4819	0	1	221260000			40147	17126	19751	19834	46497	46497					0.1382096117661149
VSLAIVLIAT	10	Unmodified	_VSLAIVLIAT_					0	0	0		tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3270141482353	2	500.326068	998.637583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.07	1	106.12	105.62	106.62	0.05455								0	0	0	0.66176	1	45117	45117		1.4819	0	1				40148	17126	19751	19834	46498	46498					0.1382096117661149
VSLAIVLIAT	10	Unmodified	_VSLAIVLIAT_					0	0	0		tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	tr|A0A7D6ZRL2|A0A7D6ZRL2_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_04115PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.3267700076103	2	500.326068	998.637583	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.02	1	106.18	105.68	106.68	0.15816								0	0	0	0.66176	1	45296	45296		1.4819	0	1				40149	17126	19751	19834	46499	46499					0.1382096117661149
VSLALSRGHRV	11	Unmodified	_VSLALSRGHRV_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8572875857353	2	597.856921	1193.69929	2.4722	0.001478	-0.72639	-0.00043428	1.7458	0.0010437	597.8561350893428	74.622	1.7364	74.947	73.945	75.681	0.32464					130	54	3	0	0	0	1.0131	2	31424	31320;31424		2.9952	0.89096	1	3279500	+		40150	8881	19752	19835	46500;46501	46501					0.11018705648439209
VSLALSRGHRV	11	Unmodified	_VSLALSRGHRV_					0	0	0			REV__ENSG00000089154|ENST00000300648|GCN1	REV__ENSG00000089154|ENST00000300648|GCN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8582641482353	2	597.856921	1193.69929	2.8708	0.0017163	-1.8519	-0.0011072	1.019	0.00060919	597.8559668340692	73.631	2.3111	75.427	74.402	76.713	1.7962					133	73	3	0	0	0	1.0174	1	30760	30760		2.7352	0.43246	1	1933100	+		40151	8881	19752	19835	46502	46502					0.11018705648439209
VSLASKVK	8	Unmodified	_VSLASKVK_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2690612673759	2	416.268553	830.522553	2.229	0.00092786	-1.7752	-0.00073897	0.45377	0.00018889	416.2677114606822	61.647	0.68186	61.977	61.735	62.416	0.32974					28	21	2	0	0	0	0.89178	1	25858	25858		0.69038	0	1	946110			40152	3237	19753	19836	46503	46503					0.10051276765466355
VSLASKVK	8	Unmodified	_VSLASKVK_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	416.268553	830.522553	1.1341	0.00047211	-0.80651	-0.00033573	0.32763	0.00013638	416.2686319941162	61.833	0.50356	61.833	61.677	62.18	0	-0.18844	0.00079613	NaN	0.69038	22	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	522720			40153	3237	19753	19836							0.10051276765466355
VSLASKVK	8	Unmodified	_VSLASKVK_					0	0	0		ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	ENSG00000149418|ENST00000278742|ST14	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	416.268553	830.522553	3.2573	0.0013559	-2.5209	-0.0010494	0.73637	0.00030653	416.2672679357791	60.289	0.34698	62.254	62.167	62.514	1.9653	0.23294	-0.00063118	NaN	0.69038	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	535920			40154	3237	19753	19836							0.10051276765466355
VSLFIPPQTP	10	Unmodified	_VSLFIPPQTP_					0	0	0		ENSG00000016490|ENST00000394711|CLCA1	ENSG00000016490|ENST00000394711|CLCA1	ENSG00000016490|ENST00000394711|CLCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.8143798708916	2	549.813325	1097.6121	3.8519	0.0021178	0.43198	0.00023751	4.2839	0.0023553	549.813336673549	95.067	0.37346	95.808	95.55	95.924	0.74124					32	13	3	0	0	0	0.62631	1	39990	39990		31.268	9.7314	1	9527700			40155	603	19754	19837	46504	46504					0.06719486654174034
VSLGWEPVI	9	Unmodified	_VSLGWEPVI_					0	0	0		ENSG00000149972|ENST00000524871|CNTN5;nc|ENSG00000149972|O94779-2|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2773315310478	2	500.279118	998.543683	1.155	0.00057784	-3.8086	-0.0019054	-2.6536	-0.0013275	500.2770314431454	27.239	0.27556	28.51	28.375	28.65	1.2715					14	8	2	0	0	0	0.22519	1	11420	11420		30.225	0	1	1515300			40156	3259	19755	19838	46505	46505					0.04435242074339385
VSLGWEPVI	9	Unmodified	_VSLGWEPVI_					0	0	0		ENSG00000149972|ENST00000524871|CNTN5;nc|ENSG00000149972|O94779-2|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	ENSG00000149972|ENST00000524871|CNTN5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	500.279118	998.543683	0.47248	0.00023637	-4.8413	-0.002422	-4.3688	-0.0021856	500.27629030512855	26.705	0.21847	28.452	28.369	28.587	1.747	-0.028936	-0.00075807	NaN	30.225	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1091200			40157	3259	19755	19838							0.04435242074339385
VSLILITT	8	Unmodified	_VSLILITT_					0	0	0			REV__ENSG00000233056|ENST00000447535|ERVH48-1	REV__ENSG00000233056|ENST00000447535|ERVH48-1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.2809631228447	2	430.278586	858.54262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.72	1	103.89	103.39	104.39	0.1731								0	0	0	1.0178	1	43740	43740		2.3027	1.6124	1		+		40158	11902	19756	19839	46506	46506					0.10769027705407552
VSLRVLSRLIQ	11	Unmodified	_VSLRVLSRLIQ_					0	0	0			REV__ENSG00000113555|ENST00000231484|PCDH12	REV__ENSG00000113555|ENST00000231484|PCDH12	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	321.9808532595634	4	321.709403	1282.8085	1.5371	0.0004945	3.5637	0.0011465	5.1008	0.001641	321.71029210306534	56.374	0.83819	56.695	56.362	57.2	0.32103					44	28	2	0	0	0	0.14606	1	23746	23746		0.064406	0	1	2093300	+		40159	9386	19757	19840	46507	46507					0.17841291547938454
VSLSEIIG	8	Unmodified	_VSLSEIIG_					0	0	0		GUK1-NFATC4|1|fusion;GUK1-NFATC4|2|fusion	GUK1-NFATC4|1|fusion	GUK1-NFATC4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	817.4707519412041	1	817.466561	816.459284	1.2572	0.0010278	2.659	0.0021736	3.9162	0.0032014	817.4687646457456	107.9	0.16595	107.9	107.81	107.97	0					23	8	4	0	0	0	0.89178	1	46373	46373		0.69038	0	1	78772000			40160	7594	19758	19841	46508	46508					0.04371291257587018
VSLSEIIG	8	Unmodified	_VSLSEIIG_					0	0	0		GUK1-NFATC4|1|fusion;GUK1-NFATC4|2|fusion	GUK1-NFATC4|1|fusion	GUK1-NFATC4|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	817.4736816287041	1	817.466561	816.459284	2.8075	0.002295	2.1159	0.0017297	4.9234	0.0040247	817.4688565625281	107.82	0.11777	107.98	107.93	108.05	0.15781					12	6	2	0	0	0	0.89178	1	46495	46495		0.69038	0	1	58057000			40161	7594	19758	19841	46509	46509					0.04371291257587018
VSLSEIIG	8	Unmodified	_VSLSEIIG_					0	0	0		GUK1-NFATC4|1|fusion;GUK1-NFATC4|2|fusion	GUK1-NFATC4|1|fusion	GUK1-NFATC4|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	817.466561	816.459284	2.7657	0.0022608	1.4416	0.0011784	4.2072	0.0034393	817.4679572570769	107.85	0.16591	107.91	107.84	108.01	0.052452	-0.041235	-0.00036094	NaN	0.69038	24	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	83663000			40162	7594	19758	19841							0.04371291257587018
VSLSEIIG	8	Unmodified	_VSLSEIIG_					0	0	0		GUK1-NFATC4|1|fusion;GUK1-NFATC4|2|fusion	GUK1-NFATC4|1|fusion	GUK1-NFATC4|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	817.466561	816.459284	2.9521	0.0024132	1.1771	0.00096225	4.1292	0.0033755	817.4685527911655	107.84	0.12772	108	107.9	108.03	0.15795	0.053868	-0.00057713	NaN	0.69038	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82322000			40163	7594	19758	19841							0.04371291257587018
VSLSKRDR	8	Unmodified	_VSLSKRDR_					0	0	0		ENST00000497931.5_1_X:100870240-100870444:-|nuORF	ENST00000497931.5_1_X:100870240-100870444:-|nuORF	ENST00000497931.5_1_X:100870240-100870444:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	480.6093627810478	2	480.78289	959.551228	2.1336	0.0010258	-1.0218	-0.00049127	1.1118	0.00053452	480.78380305674085	33.79	0.20823	34.087	33.968	34.177	0.29701					10	6	2	0	0	0	2.3239	1	14212	14212		4.756	0	1	757180			40164	6966	19759	19842	46510	46510					0.06983394394615061
VSLSKRDR	8	Unmodified	_VSLSKRDR_					0	0	0		ENST00000497931.5_1_X:100870240-100870444:-|nuORF	ENST00000497931.5_1_X:100870240-100870444:-|nuORF	ENST00000497931.5_1_X:100870240-100870444:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	480.78289	959.551228	1.6806	0.00080801	1.4539	0.00069903	3.1345	0.001507	480.7844948441448	34.359	0.20916	34.359	34.221	34.43	0	0.13592	0.0012089	NaN	4.756	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355270			40165	6966	19759	19842							0.06983394394615061
VSLTRLLPSLV	11	Unmodified	_VSLTRLLPSLV_					0	0	0			REV__ENST00000216223.9_1_22:37523877-37524075:-|nuORF	REV__ENST00000216223.9_1_22:37523877-37524075:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	399.9232055544853	3	399.923696	1196.74926	0.7157	0.00028623	-2.2778	-0.00091096	-1.5621	-0.00062473	399.92276638935374	90.453	0.48957	90.453	90.193	90.682	0					62	15	5	0	0	0	1.0131	1	37793	37793		1.2148	0	1	18960000	+		40166	12068	19760	19843	46511	46511					0.15875395533748815
VSNLPKLPKLK	11	Unmodified	_VSNLPKLPKLK_					0	0	0		nc|ENSG00000136938|Q92688-2|ANP32B;ENSG00000136938|ENST00000339399|ANP32B;ENST00000473205.1_1_9:100746884-100764563:+|nuORF;ENST00000564205.1_1_15:75614457-75614928:-|nuORF	nc|ENSG00000136938|Q92688-2|ANP32B	nc|ENSG00000136938|Q92688-2|ANP32B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1236.805834949017	1	1236.80382	1235.79654	2.1824	0.0026992	-0.81462	-0.0010075	1.3678	0.0016917	1236.8031645057213	107.36	0.15074	107.52	107.45	107.6	0.15795					18	7	3	0	0	0	1.0405	1	46129	46129		0	0	1	15867000			40167	2752	19761	19844	46512	46512					0.18807674804725139
VSNRLISRS	9	Unmodified	_VSNRLISRS_					0	0	0		nc|ENSG00000162688|P35573-2|AGL;nc|ENSG00000162688|P35573-3|AGL;ENSG00000162688|ENST00000361915|AGL	nc|ENSG00000162688|P35573-2|AGL	nc|ENSG00000162688|P35573-2|AGL	MSMS	GG20161007_CRH_Patient100_A02_02	2	516.3024169802666	2	516.301447	1030.58834	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.645	1	36.947	36.447	37.447	0.30197								0	0	0	0.42693	1	15411	15411		1.8442	0	1				40168	3639	19762	19845	46513	46513					0.07427065940373723
VSPGLLDV	8	Unmodified	_VSPGLLDV_					0	0	0		ENST00000540093.2_2_12:2851859-2881072:-|nuORF	ENST00000540093.2_2_12:2851859-2881072:-|nuORF	ENST00000540093.2_2_12:2851859-2881072:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.9236022830009	2	400.231636	798.448719	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.535	1	90.744	90.244	91.244	0.20904								0	0	0	1.0178	1	37937	37937		2.3027	0	1				40169	7212	19763	19846	46514	46514					0.041433086031474886
VSPIDGGL	8	Unmodified	_VSPIDGGL_					0	0	0			REV__ENST00000281924.6_1_2:135260502-135260565:-|nuORF	REV__ENST00000281924.6_1_2:135260502-135260565:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2094604372978	2	379.208161	756.401769	0.57758	0.00021902	2.7487	0.0010423	3.3263	0.0012614	379.20909250049027	32.119	0.39359	33.943	33.73	34.124	1.8246					33	13	3	0	0	0	0.89198	1	13486	13486		0	0	1	10533000	+		40170	12256	19764	19847	46515	46515					0.013824490520164545
VSPPLPKL	8	Unmodified	_VSPPLPKL_					0	0	0			REV__ENST00000530149.1_1_11:211118-211532:+|nuORF	REV__ENST00000530149.1_1_11:211118-211532:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	425.7758972048759	2	425.773471	849.53239	1.2125	0.00051625	3.6528	0.0015553	4.8653	0.0020715	425.7753116565973	25.591	0.66942	25.843	25.645	26.314	0.25197					70	21	5	0	0	0	0.89178	1	10687	10687		0.69038	0	1	135690000	+		40171	13697	19765	19848	46516	46516					0.10160464770854105
VSPRGIIL	8	Unmodified	_VSPRGIIL_					0	0	0		ENST00000488127.1_1_1:25880414-25890333:+|nuORF;ENSG00000157978|ENST00000374338|LDLRAP1	ENST00000488127.1_1_1:25880414-25890333:+|nuORF	ENST00000488127.1_1_1:25880414-25890333:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	854.5464355349541	1	854.545814	853.538538	1.2034	0.0010284	0.43623	0.00037278	1.6396	0.0014011	854.5456848754989	107.78	0.38739	107.78	107.49	107.88	0					42	20	3	0	0	0	0.89198	1	46285	46285		0	0	1	53011000			40172	3486	19766	19849	46517	46517					0.10590983002396115
VSPVPSTG	8	Unmodified	_VSPVPSTG_					0	0	0			REV__ENSG00000253304|ENST00000521452|TMEM200B	REV__ENSG00000253304|ENST00000521452|TMEM200B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	372.2012817263603	2	372.200336	742.386119	0.44935	0.00016725	2.6506	0.00098655	3.0999	0.0011538	372.2012119427555	24.715	0.32533	25.956	25.794	26.119	1.241					34	10	4	0	0	0	0.89198	1	10343	10343		0	0	1	19403000	+		40173	11954	19767	19850	46518	46518					0.004621625349727765
VSPVPSTG	8	Unmodified	_VSPVPSTG_					0	0	0			REV__ENSG00000253304|ENST00000521452|TMEM200B	REV__ENSG00000253304|ENST00000521452|TMEM200B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	372.200336	742.386119	0.7449	0.00027725	3.443	0.0012815	4.1879	0.0015587	372.2015426504331	25.867	0.45705	26.119	25.797	26.254	0.25197	0.069232	0.00022301	NaN	0	38	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21075000	+		40174	11954	19767	19850							0.004621625349727765
VSPVPSTG	8	Unmodified	_VSPVPSTG_					0	0	0			REV__ENSG00000253304|ENST00000521452|TMEM200B	REV__ENSG00000253304|ENST00000521452|TMEM200B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	372.200336	742.386119	0.44935	0.00016725	2.6506	0.00098655	3.0999	0.0011538	372.2012119427555	24.715	0.32533	25.956	25.794	26.119	1.241	-0.093962	-0.00036687	NaN	0	34	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	19403000	+		40175	11954	19767	19850							0.004621625349727765
VSPVPSTG	8	Unmodified	_VSPVPSTG_					0	0	0			REV__ENSG00000253304|ENST00000521452|TMEM200B	REV__ENSG00000253304|ENST00000521452|TMEM200B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	372.200336	742.386119	0.27841	0.00010362	2.7474	0.0010226	3.0258	0.0011262	372.20120642127733	24.39	0.36282	26.075	25.875	26.238	1.6845	0.02473	-0.00029482	NaN	0	40	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15104000	+		40176	11954	19767	19850							0.004621625349727765
VSQDHGPRGGL	11	Unmodified	_VSQDHGPRGGL_					0	0	0		ENST00000253506.9_1_18:77170886-77171015:+|nuORF	ENST00000253506.9_1_18:77170886-77171015:+|nuORF	ENST00000253506.9_1_18:77170886-77171015:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	561.7817870974541	2	561.786161	1121.55777	1.5033	0.00084451	-4.1896	-0.0023537	-2.6864	-0.0015092	561.783470473653	71.341	0.63879	71.664	71.367	72.006	0.32359					45	19	4	0	0	0	0.92747	1	29789	29789		8.1555	1.4324	1	2432000			40177	5591	19768	19851	46519	46519					0.0018528755535953678
VSRALPAILW	10	Unmodified	_VSRALPAILW_					0	0	0		ENST00000574202.1_1_17:3856610-3867516:-|nuORF	ENST00000574202.1_1_17:3856610-3867516:-|nuORF	ENST00000574202.1_1_17:3856610-3867516:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3439208865166	2	563.342584	1124.67061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.7	1	103.75	103.25	104.25	0.059502								0	0	0	0.66052	1	43558	43558		3.5965	0.31518	1				40178	7404	19769	19852	46520	46520					0.11326588019323935
VSRALPAILW	10	Unmodified	_VSRALPAILW_					0	0	0		ENST00000574202.1_1_17:3856610-3867516:-|nuORF	ENST00000574202.1_1_17:3856610-3867516:-|nuORF	ENST00000574202.1_1_17:3856610-3867516:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3444702029228	2	563.342584	1124.67061	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.62	1	103.79	103.29	104.29	0.1731								0	0	0	0.66052	1	43674	43674		3.5965	0.31518	1				40179	7404	19769	19852	46521	46521					0.11326588019323935
VSRERQLI	8	Unmodified	_VSRERQLI_					0	0	0		nc|ENSG00000177103|Q8TD84-2|DSCAML1;DSCAML1|p.N1856Tfs*49|1|0.04|ENSG00000177103|chr11:117431023-117431023|C/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1	nc|ENSG00000177103|Q8TD84-2|DSCAML1	nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7993957400322	2	500.79854	999.582528	1.7272	0.00086497	0.58185	0.00029139	2.309	0.0011564	500.79843238131866	74.305	0.25722	74.305	74.173	74.43	0					14	7	2	0	0	0	0.89008	1	30968	30968		2.5775	0	1	585990			40180	430	19770	19853	46522	46522					0.08271967428709104
VSRERQLI	8	Unmodified	_VSRERQLI_					0	0	0		nc|ENSG00000177103|Q8TD84-2|DSCAML1;DSCAML1|p.N1856Tfs*49|1|0.04|ENSG00000177103|chr11:117431023-117431023|C/-|frameshift_variant;ENSG00000177103|ENST00000651296|DSCAML1	nc|ENSG00000177103|Q8TD84-2|DSCAML1	nc|ENSG00000177103|Q8TD84-2|DSCAML1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	500.79854	999.582528	3.5522	0.001779	-0.13182	-6.6017E-05	3.4204	0.0017129	500.7977795508974	73.263	0.22237	74.593	74.443	74.665	1.3297	0.14401	0.00028877	NaN	2.5775	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	523780			40181	430	19770	19853							0.08271967428709104
VSRFLRLH	8	Unmodified	_VSRFLRLH_					0	0	0		ENST00000493997.1_1_2:55086744-55094271:+|nuORF	ENST00000493997.1_1_2:55086744-55094271:+|nuORF	ENST00000493997.1_1_2:55086744-55094271:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.2108032107353	3	343.210171	1026.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.04	1	102.23	101.73	102.73	0.19076								0	0	0	1.0178	1	42907	42907		1.4819	0	1				40182	6931	19771	19854	46523	46523					0.09644281390819742
VSRGLGLV	8	Unmodified	_VSRGLGLV_					0	0	0			REV__ENST00000463181.5_1_7:26238946-26239063:-|nuORF	REV__ENST00000463181.5_1_7:26238946-26239063:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	800.5000488162041	1	800.498864	799.491587	2.8985	0.0023202	-1.0535	-0.00084335	1.845	0.0014769	800.497165283094	103.9	0.099838	104.08	104.01	104.11	0.1731					10	4	3	0	0	0	0.89051	1	43857	43857		2.3027	0	1	31987000	+		40183	13213	19772	19855	46524	46524					0.08382123451224288
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.2398	1	0.2398	-0.2602	0.7398	0								0	0	0	0.42693	1	98	98		1.0715	0	1				40184	49	19773	19856	46525	46525					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.38793	1	0.38793	-0.11207	0.88793	0								0	0	0	0.42693	1	158	158		0	0	1				40185	49	19773	19856	46526	46526					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.56313	1	0.56313	0.063125	1.0631	0								0	0	0	0.42693	1	230	230		0	0	1				40186	49	19773	19856	46527	46527					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.87448	1	0.87448	0.37448	1.3745	0								0	0	0	0.42693	1	358	358		0	0	1				40187	49	19773	19856	46528	46528					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2688781619072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0826	1	1.0826	0.58262	1.5826	0								0	0	0	0.42693	1	444	444		0	0	1				40188	49	19773	19856	46529	46529					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2457	1	1.2457	0.74569	1.7457	0								0	0	0	0.42693	1	511	511		0	0	1				40189	49	19773	19856	46530	46530					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2688476443291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3835	1	1.3835	0.88348	1.8835	0								0	0	0	0.42693	1	568	568		0	0	1				40190	49	19773	19856	46531	46531					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5838	1	1.5838	1.0838	2.0838	0								0	0	0	0.42693	1	651	651		0	0	1				40191	49	19773	19856	46532	46532					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6847	1	1.6847	1.1847	2.1847	0								0	0	0	0.42693	1	692	692		0	0	1				40192	49	19773	19856	46533	46533					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2691528201103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7923	1	1.7923	1.2923	2.2923	0								0	0	0	0.42693	1	735	735		0	0	1				40193	49	19773	19856	46534	46534					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9713	1	1.9713	1.4713	2.4713	0								0	0	0	0.42693	1	808	808		0	0	1				40194	49	19773	19856	46535	46535					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2690917849541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2876	1	2.2876	1.7876	2.7876	0								0	0	0	0.42693	1	938	938		0	0	1				40195	49	19773	19856	46536	46536					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4265	1	2.4265	1.9265	2.9265	0								0	0	0	0.42693	1	995	995		0	0	1				40196	49	19773	19856	46537	46537					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2689086794853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5585	1	2.5585	2.0585	3.0585	0								0	0	0	0.42693	1	1049	1049		0	0	1				40197	49	19773	19856	46538	46538					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6984	1	2.6984	2.1984	3.1984	0								0	0	0	0.42693	1	1106	1106		0	0	1				40198	49	19773	19856	46539	46539					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8939	1	2.8939	2.3939	3.3939	0								0	0	0	0.42693	1	1186	1186		0	0	1				40199	49	19773	19856	46540	46540					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0124	1	3.0124	2.5124	3.5124	0								0	0	0	0.42693	1	1235	1235		0	0	1				40200	49	19773	19856	46541	46541					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1894	1	3.1894	2.6894	3.6894	0								0	0	0	0.42693	1	1308	1308		0	0	1				40201	49	19773	19856	46542	46542					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3225	1	3.3225	2.8225	3.8225	0								0	0	0	0.42693	1	1363	1363		0	0	1				40202	49	19773	19856	46543	46543					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4604	1	3.4604	2.9604	3.9604	0								0	0	0	0.42693	1	1420	1420		0	0	1				40203	49	19773	19856	46544	46544					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6093	1	3.6093	3.1093	4.1093	0								0	0	0	0.42693	1	1482	1482		0	0	1				40204	49	19773	19856	46545	46545					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7393	1	3.7393	3.2393	4.2393	0								0	0	0	0.42693	1	1536	1536		0	0	1				40205	49	19773	19856	46546	46546					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8853	1	3.8853	3.3853	4.3853	0								0	0	0	0.42693	1	1596	1596		0	0	1				40206	49	19773	19856	46547	46547					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9816	1	3.9816	3.4816	4.4816	0								0	0	0	0.42693	1	1636	1636		0	0	1				40207	49	19773	19856	46548	46548					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2688171267509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1296	1	4.1296	3.6296	4.6296	0								0	0	0	0.42693	1	1698	1698		0	0	1				40208	49	19773	19856	46549	46549					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2496	1	4.2496	3.7496	4.7496	0								0	0	0	0.42693	1	1747	1747		0	0	1				40209	49	19773	19856	46550	46550					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3853	1	4.3853	3.8853	4.8853	0								0	0	0	0.42693	1	1802	1802		0	0	1				40210	49	19773	19856	46551	46551					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5207	1	4.5207	4.0207	5.0207	0								0	0	0	0.42693	1	1857	1857		0	0	1				40211	49	19773	19856	46552	46552					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6339	1	5.6339	5.1339	6.1339	0								0	0	0	0.42693	1	2314	2314		0	0	1				40212	49	19773	19856	46553	46553					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7465	1	5.7465	5.2465	6.2465	0								0	0	0	0.42693	1	2361	2361		0	0	1				40213	49	19773	19856	46554	46554					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2694579958916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9173	1	5.9173	5.4173	6.4173	0								0	0	0	0.42693	1	2432	2432		0	0	1				40214	49	19773	19856	46555	46555					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2688476443291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1212	1	6.1212	5.6212	6.6212	0								0	0	0	0.42693	1	2514	2514		0	0	1				40215	49	19773	19856	46556	46556					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3016	1	6.3016	5.8016	6.8016	0								0	0	0	0.42693	1	2587	2587		0	0	1				40216	49	19773	19856	46557	46557					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.421	1	6.421	5.921	6.921	0								0	0	0	0.42693	1	2637	2637		0	0	1				40217	49	19773	19856	46558	46558					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6005	1	6.6005	6.1005	7.1005	0								0	0	0	0.42693	1	2711	2711		0	0	1				40218	49	19773	19856	46559	46559					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7529	1	6.7529	6.2529	7.2529	0								0	0	0	0.42693	1	2774	2774		0	0	1				40219	49	19773	19856	46560	46560					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8961	1	6.8961	6.3961	7.3961	0								0	0	0	0.42693	1	2834	2834		0	0	1				40220	49	19773	19856	46561	46561					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0006	1	7.0006	6.5006	7.5006	0								0	0	0	0.42693	1	2877	2877		0	0	1				40221	49	19773	19856	46562	46562					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1821	1	7.1821	6.6821	7.6821	0								0	0	0	0.42693	1	2953	2953		0	0	1				40222	49	19773	19856	46563	46563					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3707	1	7.3707	6.8707	7.8707	0								0	0	0	0.42693	1	3030	3030		0	0	1				40223	49	19773	19856	46564	46564					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2677184939384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.71	1	7.71	7.21	8.21	0								0	0	0	0.42693	1	3169	3169		0	0	1				40224	49	19773	19856	46565	46565					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8709	1	7.8709	7.3709	8.3709	0								0	0	0	0.42693	1	3236	3236		0	0	1				40225	49	19773	19856	46566	46566					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0302	1	8.0302	7.5302	8.5302	0								0	0	0	0.42693	1	3302	3302		0	0	1				40226	49	19773	19856	46567	46567					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687560915947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2502	1	8.2502	7.7502	8.7502	0								0	0	0	0.42693	1	3393	3393		0	0	1				40227	49	19773	19856	46568	46568					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3817	1	8.3817	7.8817	8.8817	0								0	0	0	0.42693	1	3447	3447		0	0	1				40228	49	19773	19856	46569	46569					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8578	1	8.8578	8.3578	9.3578	0								0	0	0	0.42693	1	3645	3645		0	0	1				40229	49	19773	19856	46570	46570					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.508	1	12.508	12.008	13.008	0								0	0	0	0.42693	1	5177	5177		1.0715	0	1				40230	49	19773	19856	46571	46571					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.572	1	16.572	16.072	17.072	0								0	0	0	0.42693	1	6879	6879		0.23584	0	1				40231	49	19773	19856	46572	46572					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.291	1	18.291	17.791	18.791	0								0	0	0	0.42693	1	7600	7600		1.0715	0	1				40232	49	19773	19856	46573	46573					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.024	1	19.024	18.524	19.524	0								0	0	0	0.42693	1	7906	7906		0	0	1				40233	49	19773	19856	46574	46574					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.862	1	26.862	26.362	27.362	0								0	0	0	0.42693	1	11228	11228		0	0	1				40234	49	19773	19856	46575	46575					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2694885134697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.186	1	29.186	28.686	29.686	0								0	0	0	0.42693	1	12217	12217		0	0	1				40235	49	19773	19856	46576	46576					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2693664431572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.59	1	29.59	29.09	30.09	0								0	0	0	0.42693	1	12388	12388		0	0	1				40236	49	19773	19856	46577	46577					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.204	1	31.204	30.704	31.704	0								0	0	0	0.42693	1	13073	13073		0	0	1				40237	49	19773	19856	46578	46578					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.76	1	31.76	31.26	32.26	0								0	0	0	0.42693	1	13307	13307		0	0	1				40238	49	19773	19856	46579	46579					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.616	1	40.616	40.116	41.116	0								0	0	0	0.42693	1	17015	17015		0	0	1				40239	49	19773	19856	46580	46580					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2704040408134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.765	1	40.765	40.265	41.265	0								0	0	0	0.42693	1	17077	17077		0	0	1				40240	49	19773	19856	46581	46581					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2695800662041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.018	1	41.018	40.518	41.518	0								0	0	0	0.42693	1	17180	17180		0	0	1				40241	49	19773	19856	46582	46582					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.434	1	41.434	40.934	41.934	0								0	0	0	0.42693	1	17348	17348		0	0	1				40242	49	19773	19856	46583	46583					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2693054080009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.796	1	41.796	41.296	42.296	0								0	0	0	0.42693	1	17494	17494		0	0	1				40243	49	19773	19856	46584	46584					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.535	1	43.535	43.035	44.035	0								0	0	0	0.42693	1	18224	18224		0	0	1				40244	49	19773	19856	46585	46585					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.77	1	51.77	51.27	52.27	0								0	0	0	0.42693	1	21592	21592		0	0	1				40245	49	19773	19856	46586	46586					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2417480349541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.293	1	54.293	53.793	54.793	0								0	0	0	0.42693	1	22629	22629		0	0	1				40246	49	19773	19856	46587	46587					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2697326540947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.473	1	62.473	61.973	62.973	0								0	0	0	0.42693	1	26045	26045		0	0	1				40247	49	19773	19856	46588	46588					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2696411013603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.145	1	68.145	67.645	68.645	0								0	0	0	0.42693	1	28380	28380		0	0	1				40248	49	19773	19856	46589	46589					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2699767947197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.871	1	82.871	82.371	83.371	0								0	0	0	0.42693	1	34526	34526		0	0	1				40249	49	19773	19856	46590	46590					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2678405642509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.15	1	110.15	109.65	110.65	0								0	0	0	0.42693	1	47695	47695		0	0	1				40250	49	19773	19856	46591	46591					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.74	1	110.74	110.24	111.24	0								0	0	0	0.42693	1	47923	47923		0	0	1				40251	49	19773	19856	46592	46592					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.04	1	111.04	110.54	111.54	0								0	0	0	0.42693	1	48039	48039		0	0	1				40252	49	19773	19856	46593	46593					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2675964236259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.21	1	111.21	110.71	111.71	0								0	0	0	0.42693	1	48104	48104		0	0	1				40253	49	19773	19856	46594	46594					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.2675659060478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.31	1	111.31	110.81	111.81	0								0	0	0	0.42693	1	48144	48144		0	0	1				40254	49	19773	19856	46595	46595					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2806	1	1.4277	0.92768	1.9277	0.14703								0	0	0	0.42693	1	528	528		0	0	1				40255	49	19773	19856	46596	46596					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3932	1	1.5402	1.0402	2.0402	0.14703								0	0	0	0.42693	1	575	575		0	0	1				40256	49	19773	19856	46597	46597					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5248	1	1.6718	1.1718	2.1718	0.14703								0	0	0	0.42693	1	628	628		0	0	1				40257	49	19773	19856	46598	46598					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6433	1	1.7904	1.2904	2.2904	0.14703								0	0	0	0.42693	1	677	677		0	0	1				40258	49	19773	19856	46599	46599					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7328	1	1.8798	1.3798	2.3798	0.14703								0	0	0	0.42693	1	714	714		0	0	1				40259	49	19773	19856	46600	46600					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8522	1	1.9992	1.4992	2.4992	0.14703								0	0	0	0.42693	1	762	762		0	0	1				40260	49	19773	19856	46601	46601					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2688476443291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9958	1	2.1183	1.6183	2.6183	0.12256								0	0	0	0.42693	1	821	821		0	0	1				40261	49	19773	19856	46602	46602					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1252	1	2.2477	1.7477	2.7477	0.12256								0	0	0	0.42693	1	874	874		0	0	1				40262	49	19773	19856	46603	46603					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3159	1	2.4385	1.9385	2.9385	0.12256								0	0	0	0.42693	1	955	955		0	0	1				40263	49	19773	19856	46604	46604					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4385	1	2.561	2.061	3.061	0.12256								0	0	0	0.42693	1	1005	1005		0	0	1				40264	49	19773	19856	46605	46605					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5671	1	2.6896	2.1896	3.1896	0.12256								0	0	0	0.42693	1	1058	1058		0	0	1				40265	49	19773	19856	46606	46606					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6672	1	2.7898	2.2898	3.2898	0.12256								0	0	0	0.42693	1	1100	1100		0	0	1				40266	49	19773	19856	46607	46607					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7875	1	2.9101	2.4101	3.4101	0.12256								0	0	0	0.42693	1	1150	1150		0	0	1				40267	49	19773	19856	46608	46608					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.886	1	3.0086	2.5086	3.5086	0.12256								0	0	0	0.42693	1	1191	1191		0	0	1				40268	49	19773	19856	46609	46609					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0043	1	3.1268	2.6268	3.6268	0.12256								0	0	0	0.42693	1	1240	1240		0	0	1				40269	49	19773	19856	46610	46610					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1084	1	3.2309	2.7309	3.7309	0.12256								0	0	0	0.42693	1	1283	1283		0	0	1				40270	49	19773	19856	46611	46611					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2203	1	3.3223	2.8223	3.8223	0.10199								0	0	0	0.42693	1	1329	1329		0	0	1				40271	49	19773	19856	46612	46612					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3119	1	3.4139	2.9139	3.9139	0.10199								0	0	0	0.42693	1	1368	1368		0	0	1				40272	49	19773	19856	46613	46613					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4203	1	3.5223	3.0223	4.0223	0.10199								0	0	0	0.42693	1	1413	1413		0	0	1				40273	49	19773	19856	46614	46614					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5713	1	3.6733	3.1733	4.1733	0.10199								0	0	0	0.42693	1	1474	1474		0	0	1				40274	49	19773	19856	46615	46615					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7113	1	3.8133	3.3133	4.3133	0.10199								0	0	0	0.42693	1	1531	1531		0	0	1				40275	49	19773	19856	46616	46616					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8114	1	3.9134	3.4134	4.4134	0.10199								0	0	0	0.42693	1	1573	1573		0	0	1				40276	49	19773	19856	46617	46617					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2688781619072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9102	1	4.0122	3.5122	4.5122	0.10199								0	0	0	0.42693	1	1614	1614		0	0	1				40277	49	19773	19856	46618	46618					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0209	1	4.1229	3.6229	4.6229	0.10199								0	0	0	0.42693	1	1660	1660		0	0	1				40278	49	19773	19856	46619	46619					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1875	1	4.2895	3.7895	4.7895	0.10199								0	0	0	0.42693	1	1730	1730		0	0	1				40279	49	19773	19856	46620	46620					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687560915947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3034	1	4.4054	3.9054	4.9054	0.10199								0	0	0	0.42693	1	1778	1778		0	0	1				40280	49	19773	19856	46621	46621					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4056	1	4.4936	3.9936	4.9936	0.08803								0	0	0	0.42693	1	1821	1821		0	0	1				40281	49	19773	19856	46622	46622					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5171	1	4.6052	4.1052	5.1052	0.08803								0	0	0	0.42693	1	1867	1867		0	0	1				40282	49	19773	19856	46623	46623					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6319	1	4.7199	4.2199	5.2199	0.08803								0	0	0	0.42693	1	1914	1914		0	0	1				40283	49	19773	19856	46624	46624					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7532	1	4.8412	4.3412	5.3412	0.08803								0	0	0	0.42693	1	1964	1964		0	0	1				40284	49	19773	19856	46625	46625					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8657	1	4.9537	4.4537	5.4537	0.08803								0	0	0	0.42693	1	2010	2010		0	0	1				40285	49	19773	19856	46626	46626					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9699	1	5.0579	4.5579	5.5579	0.08803								0	0	0	0.42693	1	2054	2054		0	0	1				40286	49	19773	19856	46627	46627					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.109	1	5.197	4.697	5.697	0.08803								0	0	0	0.42693	1	2111	2111		0	0	1				40287	49	19773	19856	46628	46628					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2185	1	5.3066	4.8066	5.8066	0.08803								0	0	0	0.42693	1	2156	2156		0	0	1				40288	49	19773	19856	46629	46629					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3234	1	5.4115	4.9115	5.9115	0.08803								0	0	0	0.42693	1	2199	2199		0	0	1				40289	49	19773	19856	46630	46630					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4253	1	5.5133	5.0133	6.0133	0.08803								0	0	0	0.42693	1	2241	2241		0	0	1				40290	49	19773	19856	46631	46631					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2678405642509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5238	1	5.6118	5.1118	6.1118	0.08803								0	0	0	0.42693	1	2282	2282		0	0	1				40291	49	19773	19856	46632	46632					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6306	1	5.7105	5.2105	6.2105	0.079923								0	0	0	0.42693	1	2327	2327		0	0	1				40292	49	19773	19856	46633	46633					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7668	1	5.8467	5.3467	6.3467	0.079923								0	0	0	0.42693	1	2384	2384		0	0	1				40293	49	19773	19856	46634	46634					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2677490115166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8731	1	5.953	5.453	6.453	0.079923								0	0	0	0.42693	1	2428	2428		0	0	1				40294	49	19773	19856	46635	46635					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679321169853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9793	1	6.0592	5.5592	6.5592	0.079923								0	0	0	0.42693	1	2472	2472		0	0	1				40295	49	19773	19856	46636	46636					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0815	1	6.1614	5.6614	6.6614	0.079923								0	0	0	0.42693	1	2515	2515		0	0	1				40296	49	19773	19856	46637	46637					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1824	1	6.2623	5.7623	6.7623	0.079923								0	0	0	0.42693	1	2556	2556		0	0	1				40297	49	19773	19856	46638	46638					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2809	1	6.3608	5.8608	6.8608	0.079923								0	0	0	0.42693	1	2596	2596		0	0	1				40298	49	19773	19856	46639	46639					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3847	1	6.4646	5.9646	6.9646	0.079923								0	0	0	0.42693	1	2639	2639		0	0	1				40299	49	19773	19856	46640	46640					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4883	1	6.5683	6.0683	7.0683	0.079923								0	0	0	0.42693	1	2682	2682		0	0	1				40300	49	19773	19856	46641	46641					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5825	1	6.6624	6.1624	7.1624	0.079923								0	0	0	0.42693	1	2721	2721		0	0	1				40301	49	19773	19856	46642	46642					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7331	1	6.8131	6.3131	7.3131	0.079923								0	0	0	0.42693	1	2784	2784		0	0	1				40302	49	19773	19856	46643	46643					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8401	1	6.9164	6.4164	7.4164	0.07632								0	0	0	0.42693	1	2828	2828		0	0	1				40303	49	19773	19856	46644	46644					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9383	1	7.0146	6.5146	7.5146	0.07632								0	0	0	0.42693	1	2869	2869		0	0	1				40304	49	19773	19856	46645	46645					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1467	1	7.223	6.723	7.723	0.07632								0	0	0	0.42693	1	2956	2956		0	0	1				40305	49	19773	19856	46646	46646					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2463	1	7.3226	6.8226	7.8226	0.07632								0	0	0	0.42693	1	2997	2997		0	0	1				40306	49	19773	19856	46647	46647					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4067	1	7.483	6.983	7.983	0.07632								0	0	0	0.42693	1	3064	3064		0	0	1				40307	49	19773	19856	46648	46648					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5851	1	7.6614	7.1614	8.1614	0.07632								0	0	0	0.42693	1	3138	3138		0	0	1				40308	49	19773	19856	46649	46649					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6952	1	7.7715	7.2715	8.2715	0.07632								0	0	0	0.42693	1	3183	3183		0	0	1				40309	49	19773	19856	46650	46650					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8416	1	7.9179	7.4179	8.4179	0.07632								0	0	0	0.42693	1	3244	3244		0	0	1				40310	49	19773	19856	46651	46651					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9396	1	8.0159	7.5159	8.5159	0.07632								0	0	0	0.42693	1	3285	3285		0	0	1				40311	49	19773	19856	46652	46652					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0309	1	8.1072	7.6072	8.6072	0.07632								0	0	0	0.42693	1	3324	3324		0	0	1				40312	49	19773	19856	46653	46653					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.142	1	8.2183	7.7183	8.7183	0.07632								0	0	0	0.42693	1	3370	3370		0	0	1				40313	49	19773	19856	46654	46654					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2613	1	8.3376	7.8376	8.8376	0.07632								0	0	0	0.42693	1	3420	3420		0	0	1				40314	49	19773	19856	46655	46655					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3946	1	8.4709	7.9709	8.9709	0.07632								0	0	0	0.42693	1	3475	3475		0	0	1				40315	49	19773	19856	46656	46656					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4891	1	8.5654	8.0654	9.0654	0.07632								0	0	0	0.42693	1	3515	3515		0	0	1				40316	49	19773	19856	46657	46657					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6011	1	8.6774	8.1774	9.1774	0.07632								0	0	0	0.42693	1	3562	3562		0	0	1				40317	49	19773	19856	46658	46658					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7248	1	8.8012	8.3012	9.3012	0.07632								0	0	0	0.42693	1	3614	3614		0	0	1				40318	49	19773	19856	46659	46659					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8197	1	8.896	8.396	9.396	0.07632								0	0	0	0.42693	1	3653	3653		0	0	1				40319	49	19773	19856	46660	46660					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9325	1	9.0088	8.5088	9.5088	0.07632								0	0	0	0.42693	1	3699	3699		0	0	1				40320	49	19773	19856	46661	46661					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.032	1	9.1084	8.6084	9.6084	0.07632								0	0	0	0.42693	1	3740	3740		0	0	1				40321	49	19773	19856	46662	46662					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.468	1	12.557	12.057	13.057	0.089381								0	0	0	0.42693	1	5174	5174		1.0715	0	1				40322	49	19773	19856	46663	46663					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2693054080009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.598	1	12.687	12.187	13.187	0.089381								0	0	0	0.42693	1	5229	5229		1.0715	0	1				40323	49	19773	19856	46664	46664					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2693359255791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.715	1	12.804	12.304	13.304	0.089381								0	0	0	0.42693	1	5278	5278		1.0715	0	1				40324	49	19773	19856	46665	46665					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.974	1	13.073	12.573	13.573	0.09944								0	0	0	0.42693	1	5385	5385		1.0715	0	1				40325	49	19773	19856	46666	46666					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.396	1	13.496	12.996	13.996	0.09944								0	0	0	0.42693	1	5559	5559		0	0	1				40326	49	19773	19856	46667	46667					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.594	1	13.693	13.193	14.193	0.09944								0	0	0	0.42693	1	5641	5641		1.0715	0	1				40327	49	19773	19856	46668	46668					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2675353884697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.845	1	13.944	13.444	14.444	0.09944								0	0	0	0.42693	1	5746	5746		0	0	1				40328	49	19773	19856	46669	46669					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2695800662041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.129	1	14.242	13.742	14.742	0.11295								0	0	0	0.42693	1	5862	5862		0.23584	0	1				40329	49	19773	19856	46670	46670					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.739	1	15.869	15.369	16.369	0.13022								0	0	0	0.42693	1	6531	6531		0	0	1				40330	49	19773	19856	46671	46671					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2674133181572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.14	1	16.27	15.77	16.77	0.13022								0	0	0	0.42693	1	6700	6700		0	0	1				40331	49	19773	19856	46672	46672					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.242	1	16.373	15.873	16.873	0.13022								0	0	0	0.42693	1	6742	6742		0	0	1				40332	49	19773	19856	46673	46673					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2677490115166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.975	1	17.126	16.626	17.626	0.15093								0	0	0	0.42693	1	7042	7042		0	0	1				40333	49	19773	19856	46674	46674					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.845	1	18.018	17.518	18.518	0.17285								0	0	0	0.42693	1	7407	7407		0	0	1				40334	49	19773	19856	46675	46675					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.095	1	18.268	17.768	18.768	0.17285								0	0	0	0.42693	1	7510	7510		0	0	1				40335	49	19773	19856	46676	46676					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.377	1	19.57	19.07	20.07	0.19342								0	0	0	0.42693	1	8048	8048		0	0	1				40336	49	19773	19856	46677	46677					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.503	1	19.696	19.196	20.196	0.19342								0	0	0	0.42693	1	8102	8102		0	0	1				40337	49	19773	19856	46678	46678					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.372	1	20.582	20.082	21.082	0.21024								0	0	0	0.42693	1	8462	8462		0	0	1				40338	49	19773	19856	46679	46679					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.622	1	20.832	20.332	21.332	0.21024								0	0	0	0.42693	1	8565	8565		0	0	1				40339	49	19773	19856	46680	46680					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.745	1	20.955	20.455	21.455	0.21024								0	0	0	0.42693	1	8616	8616		0	0	1				40340	49	19773	19856	46681	46681					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2701599001884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.968	1	21.178	20.678	21.678	0.21024								0	0	0	0.42693	1	8709	8709		0	0	1				40341	49	19773	19856	46682	46682					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.577	1	22.81	22.31	23.31	0.23306								0	0	0	0.42693	1	9408	9408		0	0	1				40342	49	19773	19856	46683	46683					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2708007693291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.866	1	23.099	22.599	23.599	0.23306								0	0	0	0.42693	1	9536	9536		0	0	1				40343	49	19773	19856	46684	46684					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2702209353447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23	1	23.233	22.733	23.733	0.23306								0	0	0	0.42693	1	9593	9593		0	0	1				40344	49	19773	19856	46685	46685					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2694579958916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.146	1	23.379	22.879	23.879	0.23306								0	0	0	0.42693	1	9653	9653		0	0	1				40345	49	19773	19856	46686	46686					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2688171267509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.371	1	23.604	23.104	24.104	0.23306								0	0	0	0.42693	1	9746	9746		0	0	1				40346	49	19773	19856	46687	46687					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.555	1	23.788	23.288	24.288	0.23306								0	0	0	0.42693	1	9824	9824		0	0	1				40347	49	19773	19856	46688	46688					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2690917849541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.159	1	25.411	24.911	25.911	0.25197								0	0	0	0.42693	1	10503	10503		0	0	1				40348	49	19773	19856	46689	46689					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2692138552666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.273	1	25.525	25.025	26.025	0.25197								0	0	0	0.42693	1	10551	10551		0	0	1				40349	49	19773	19856	46690	46690					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2691833376884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.392	1	25.644	25.144	26.144	0.25197								0	0	0	0.42693	1	10601	10601		0	0	1				40350	49	19773	19856	46691	46691					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2691833376884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.552	1	25.804	25.304	26.304	0.25197								0	0	0	0.42693	1	10670	10670		0	0	1				40351	49	19773	19856	46692	46692					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.796	1	26.048	25.548	26.548	0.25197								0	0	0	0.42693	1	10772	10772		0	0	1				40352	49	19773	19856	46693	46693					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.547	1	26.809	26.309	27.309	0.26173								0	0	0	0.42693	1	11098	11098		0	0	1				40353	49	19773	19856	46694	46694					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2695190310478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.347	1	27.618	27.118	28.118	0.27119								0	0	0	0.42693	1	11434	11434		0	0	1				40354	49	19773	19856	46695	46695					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.419	1	28.69	28.19	29.19	0.27119								0	0	0	0.42693	1	11891	11891		0	0	1				40355	49	19773	19856	46696	46696					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.617	1	28.896	28.396	29.396	0.2793								0	0	0	0.42693	1	11972	11972		0	0	1				40356	49	19773	19856	46697	46697					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2692138552666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.868	1	29.148	28.648	29.648	0.2793								0	0	0	0.42693	1	12080	12080		0	0	1				40357	49	19773	19856	46698	46698					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2697631716728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.284	1	29.564	29.064	30.064	0.2793								0	0	0	0.42693	1	12259	12259		0	0	1				40358	49	19773	19856	46699	46699					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2692138552666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.745	1	30.03	29.53	30.53	0.2859								0	0	0	0.42693	1	12455	12455		0	0	1				40359	49	19773	19856	46700	46700					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2704955935478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.925	1	32.215	31.715	32.715	0.29086								0	0	0	0.42693	1	13400	13400		0	0	1				40360	49	19773	19856	46701	46701					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.206	1	32.5	32	33	0.29431								0	0	0	0.42693	1	13517	13517		0	0	1				40361	49	19773	19856	46702	46702					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2687560915947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.365	1	32.659	32.159	33.159	0.29431								0	0	0	0.42693	1	13583	13583		0	0	1				40362	49	19773	19856	46703	46703					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.701	1	32.995	32.495	33.495	0.29431								0	0	0	0.42693	1	13726	13726		0	0	1				40363	49	19773	19856	46704	46704					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2688476443291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.072	1	34.369	33.869	34.869	0.29701								0	0	0	0.42693	1	14308	14308		0	0	1				40364	49	19773	19856	46705	46705					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.336	1	34.633	34.133	35.133	0.29701								0	0	0	0.42693	1	14419	14419		0	0	1				40365	49	19773	19856	46706	46706					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2693664431572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.757	1	41.074	40.574	41.574	0.31683								0	0	0	0.42693	1	17132	17132		0	0	1				40366	49	19773	19856	46707	46707					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2691833376884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.255	1	41.572	41.072	42.072	0.31683								0	0	0	0.42693	1	17332	17332		0	0	1				40367	49	19773	19856	46708	46708					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.347	1	50.675	50.175	51.175	0.32824								0	0	0	0.42693	1	21094	21094		0	0	1				40368	49	19773	19856	46709	46709					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2692748904228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.151	1	52.477	51.977	52.977	0.32553								0	0	0	0.42693	1	21849	21849		0	0	1				40369	49	19773	19856	46710	46710					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2691528201103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.397	1	77.714	77.214	78.214	0.31653								0	0	0	0.42693	1	32366	32366		0	0	1				40370	49	19773	19856	46711	46711					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.21	1	110.26	109.76	110.76	0.048843								0	0	0	0.42693	1	47555	47555		0	0	1				40371	49	19773	19856	46712	46712					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2176	1	3.8412	3.3412	4.3412	0.62362								0	0	0	0.42693	1	1328	1328		0	0	1				40372	49	19773	19856	46713	46713					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3112	1	3.9348	3.4348	4.4348	0.62362								0	0	0	0.42693	1	1367	1367		0	0	1				40373	49	19773	19856	46714	46714					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4446	1	4.0682	3.5682	4.5682	0.62362								0	0	0	0.42693	1	1422	1422		0	0	1				40374	49	19773	19856	46715	46715					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.553	1	4.1766	3.6766	4.6766	0.62362								0	0	0	0.42693	1	1467	1467		0	0	1				40375	49	19773	19856	46716	46716					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6543	1	4.278	3.778	4.778	0.62362								0	0	0	0.42693	1	1509	1509		0	0	1				40376	49	19773	19856	46717	46717					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.7598	1	4.3834	3.8834	4.8834	0.62362								0	0	0	0.42693	1	1552	1552		0	0	1				40377	49	19773	19856	46718	46718					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8804	1	4.504	4.004	5.004	0.62362								0	0	0	0.42693	1	1601	1601		0	0	1				40378	49	19773	19856	46719	46719					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9708	1	4.5944	4.0944	5.0944	0.62362								0	0	0	0.42693	1	1638	1638		0	0	1				40379	49	19773	19856	46720	46720					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0782	1	4.7018	4.2018	5.2018	0.62362								0	0	0	0.42693	1	1683	1683		0	0	1				40380	49	19773	19856	46721	46721					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2641	1	4.8877	4.3877	5.3877	0.62362								0	0	0	0.42693	1	1760	1760		0	0	1				40381	49	19773	19856	46722	46722					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.363	1	4.9842	4.4842	5.4842	0.62127								0	0	0	0.42693	1	1801	1801		0	0	1				40382	49	19773	19856	46723	46723					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.461	1	5.0823	4.5823	5.5823	0.62127								0	0	0	0.42693	1	1842	1842		0	0	1				40383	49	19773	19856	46724	46724					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5617	1	5.1829	4.6829	5.6829	0.62127								0	0	0	0.42693	1	1883	1883		0	0	1				40384	49	19773	19856	46725	46725					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6598	1	5.2811	4.7811	5.7811	0.62127								0	0	0	0.42693	1	1923	1923		0	0	1				40385	49	19773	19856	46726	46726					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679321169853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7921	1	5.4134	4.9134	5.9134	0.62127								0	0	0	0.42693	1	1978	1978		0	0	1				40386	49	19773	19856	46727	46727					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8819	1	5.5032	5.0032	6.0032	0.62127								0	0	0	0.42693	1	2015	2015		0	0	1				40387	49	19773	19856	46728	46728					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9845	1	5.6058	5.1058	6.1058	0.62127								0	0	0	0.42693	1	2057	2057		0	0	1				40388	49	19773	19856	46729	46729					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1088	1	5.73	5.23	6.23	0.62127								0	0	0	0.42693	1	2109	2109		0	0	1				40389	49	19773	19856	46730	46730					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.217	1	5.8383	5.3383	6.3383	0.62127								0	0	0	0.42693	1	2154	2154		0	0	1				40390	49	19773	19856	46731	46731					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3149	1	5.9362	5.4362	6.4362	0.62127								0	0	0	0.42693	1	2195	2195		0	0	1				40391	49	19773	19856	46732	46732					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4186	1	6.0398	5.5398	6.5398	0.62127								0	0	0	0.42693	1	2238	2238		0	0	1				40392	49	19773	19856	46733	46733					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5349	1	6.1562	5.6562	6.6562	0.62127								0	0	0	0.42693	1	2285	2285		0	0	1				40393	49	19773	19856	46734	46734					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6352	1	6.2564	5.7564	6.7564	0.62127								0	0	0	0.42693	1	2326	2326		0	0	1				40394	49	19773	19856	46735	46735					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7309	1	6.3521	5.8521	6.8521	0.62127								0	0	0	0.42693	1	2366	2366		0	0	1				40395	49	19773	19856	46736	46736					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9184	1	6.5396	6.0396	7.0396	0.62127								0	0	0	0.42693	1	2444	2444		0	0	1				40396	49	19773	19856	46737	46737					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0378	1	6.659	6.159	7.159	0.62127								0	0	0	0.42693	1	2493	2493		0	0	1				40397	49	19773	19856	46738	46738					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1395	1	6.7607	6.2607	7.2607	0.62127								0	0	0	0.42693	1	2535	2535		0	0	1				40398	49	19773	19856	46739	46739					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.3687	1	6.9899	6.4899	7.4899	0.62127								0	0	0	0.42693	1	2630	2630		0	0	1				40399	49	19773	19856	46740	46740					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2678405642509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4992	1	7.1205	6.6205	7.6205	0.62127								0	0	0	0.42693	1	2686	2686		0	0	1				40400	49	19773	19856	46741	46741					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5964	1	7.2177	6.7177	7.7177	0.62127								0	0	0	0.42693	1	2726	2726		0	0	1				40401	49	19773	19856	46742	46742					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.086	1	7.7131	7.2131	8.2131	0.62713								0	0	0	0.42693	1	2931	2931		0	0	1				40402	49	19773	19856	46743	46743					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2676269412041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2072	1	7.8343	7.3343	8.3343	0.62713								0	0	0	0.42693	1	2981	2981		0	0	1				40403	49	19773	19856	46744	46744					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4267	1	8.0539	7.5539	8.5539	0.62713								0	0	0	0.42693	1	3073	3073		0	0	1				40404	49	19773	19856	46745	46745					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6129	1	8.24	7.74	8.74	0.62713								0	0	0	0.42693	1	3150	3150		0	0	1				40405	49	19773	19856	46746	46746					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7101	1	8.3372	7.8372	8.8372	0.62713								0	0	0	0.42693	1	3191	3191		0	0	1				40406	49	19773	19856	46747	46747					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2677795290947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8776	1	8.5047	8.0047	9.0047	0.62713								0	0	0	0.42693	1	3261	3261		0	0	1				40407	49	19773	19856	46748	46748					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9885	1	8.625	8.125	9.125	0.63651								0	0	0	0.42693	1	3308	3308		0	0	1				40408	49	19773	19856	46749	46749					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0788	1	8.7153	8.2153	9.2153	0.63651								0	0	0	0.42693	1	3346	3346		0	0	1				40409	49	19773	19856	46750	46750					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679321169853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2066	1	8.8431	8.3431	9.3431	0.63651								0	0	0	0.42693	1	3400	3400		0	0	1				40410	49	19773	19856	46751	46751					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3243	1	8.9608	8.4608	9.4608	0.63651								0	0	0	0.42693	1	3451	3451		0	0	1				40411	49	19773	19856	46752	46752					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.433	1	9.0695	8.5695	9.5695	0.63651								0	0	0	0.42693	1	3497	3497		0	0	1				40412	49	19773	19856	46753	46753					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5308	1	9.1673	8.6673	9.6673	0.63651								0	0	0	0.42693	1	3539	3539		0	0	1				40413	49	19773	19856	46754	46754					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2675048708916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6219	1	9.2584	8.7584	9.7584	0.63651								0	0	0	0.42693	1	3579	3579		0	0	1				40414	49	19773	19856	46755	46755					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7149	1	9.3514	8.8514	9.8514	0.63651								0	0	0	0.42693	1	3618	3618		0	0	1				40415	49	19773	19856	46756	46756					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8123	1	9.4488	8.9488	9.9488	0.63651								0	0	0	0.42693	1	3659	3659		0	0	1				40416	49	19773	19856	46757	46757					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9124	1	9.549	9.049	10.049	0.63651								0	0	0	0.42693	1	3702	3702		0	0	1				40417	49	19773	19856	46758	46758					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.0405	1	9.677	9.177	10.177	0.63651								0	0	0	0.42693	1	3755	3755		0	0	1				40418	49	19773	19856	46759	46759					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679321169853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1414	1	9.7779	9.2779	10.278	0.63651								0	0	0	0.42693	1	3797	3797		0	0	1				40419	49	19773	19856	46760	46760					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2462	1	9.8967	9.3967	10.397	0.65058								0	0	0	0.42693	1	3841	3841		0	0	1				40420	49	19773	19856	46761	46761					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3572	1	10.008	9.5078	10.508	0.65058								0	0	0	0.42693	1	3887	3887		0	0	1				40421	49	19773	19856	46762	46762					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4598	1	10.11	9.6104	10.61	0.65058								0	0	0	0.42693	1	3930	3930		0	0	1				40422	49	19773	19856	46763	46763					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5717	1	10.222	9.7223	10.722	0.65058								0	0	0	0.42693	1	3978	3978		0	0	1				40423	49	19773	19856	46764	46764					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.821	1	11.49	10.99	11.99	0.66934								0	0	0	0.42693	1	4499	4499		0	0	1				40424	49	19773	19856	46765	46765					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.945	1	11.614	11.114	12.114	0.66934								0	0	0	0.42693	1	4549	4549		0	0	1				40425	49	19773	19856	46766	46766					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.313	1	11.982	11.482	12.482	0.66934								0	0	0	0.42693	1	4701	4701		0.23584	0	1				40426	49	19773	19856	46767	46767					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.823	1	12.517	12.017	13.017	0.69396								0	0	0	0.42693	1	4911	4911		1.0715	0	1				40427	49	19773	19856	46768	46768					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.031	1	13.757	13.257	14.257	0.72639								0	0	0	0.42693	1	5410	5410		0	0	1				40428	49	19773	19856	46769	46769					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.169	1	13.895	13.395	14.395	0.72639								0	0	0	0.42693	1	5468	5468		0	0	1				40429	49	19773	19856	46770	46770					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.503	1	14.229	13.729	14.729	0.72639								0	0	0	0.42693	1	5607	5607		0	0	1				40430	49	19773	19856	46771	46771					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.631	1	14.357	13.857	14.857	0.72639								0	0	0	0.42693	1	5660	5660		0	0	1				40431	49	19773	19856	46772	46772					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2678405642509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.757	1	14.483	13.983	14.983	0.72639								0	0	0	0.42693	1	5713	5713		0	0	1				40432	49	19773	19856	46773	46773					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2675659060478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.97	1	14.697	14.197	15.197	0.72639								0	0	0	0.42693	1	5803	5803		1.0715	0	1				40433	49	19773	19856	46774	46774					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2694579958916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.122	1	15.892	15.392	16.392	0.76937								0	0	0	0.42693	1	6284	6284		0	0	1				40434	49	19773	19856	46775	46775					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.282	1	16.108	15.608	16.608	0.82643								0	0	0	0.42693	1	6350	6350		0	0	1				40435	49	19773	19856	46776	46776					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2678710818291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.481	1	16.307	15.807	16.807	0.82643								0	0	0	0.42693	1	6433	6433		0	0	1				40436	49	19773	19856	46777	46777					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.251	1	17.077	16.577	17.577	0.82643								0	0	0	0.42693	1	6756	6756		0	0	1				40437	49	19773	19856	46778	46778					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.867	1	17.765	17.265	18.265	0.89794								0	0	0	0.42693	1	7018	7018		0	0	1				40438	49	19773	19856	46779	46779					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2688476443291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.098	1	17.996	17.496	18.496	0.89794								0	0	0	0.42693	1	7117	7117		0	0	1				40439	49	19773	19856	46780	46780					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.243	1	18.141	17.641	18.641	0.89794								0	0	0	0.42693	1	7177	7177		0	0	1				40440	49	19773	19856	46781	46781					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.36	1	18.258	17.758	18.758	0.89794								0	0	0	0.42693	1	7225	7225		0	0	1				40441	49	19773	19856	46782	46782					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.053	1	19.032	18.532	19.532	0.97922								0	0	0	0.42693	1	7516	7516		0	0	1				40442	49	19773	19856	46783	46783					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2694274783134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.763	1	20.822	20.322	21.322	1.0585								0	0	0	0.42693	1	8230	8230		0	0	1				40443	49	19773	19856	46784	46784					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.386	1	21.511	21.011	22.011	1.1254								0	0	0	0.42693	1	8494	8494		0	0	1				40444	49	19773	19856	46785	46785					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2694579958916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.691	1	21.816	21.316	22.316	1.1254								0	0	0	0.42693	1	8626	8626		0	0	1				40445	49	19773	19856	46786	46786					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2705566287041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.986	1	22.111	21.611	22.611	1.1254								0	0	0	0.42693	1	8754	8754		0	0	1				40446	49	19773	19856	46787	46787					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2693359255791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.187	1	23.364	22.864	23.864	1.177								0	0	0	0.42693	1	9273	9273		0	0	1				40447	49	19773	19856	46788	46788					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2675353884697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.631	1	25.872	25.372	26.372	1.241								0	0	0	0.42693	1	10303	10303		0	0	1				40448	49	19773	19856	46789	46789					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2673217654228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.82	1	26.061	25.561	26.561	1.241								0	0	0	0.42693	1	10387	10387		0	0	1				40449	49	19773	19856	46790	46790					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.056	1	26.316	25.816	26.816	1.2594								0	0	0	0.42693	1	10489	10489		0	0	1				40450	49	19773	19856	46791	46791					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.464	1	26.723	26.223	27.223	1.2594								0	0	0	0.42693	1	10663	10663		0	0	1				40451	49	19773	19856	46792	46792					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.672	1	26.932	26.432	27.432	1.2594								0	0	0	0.42693	1	10751	10751		0	0	1				40452	49	19773	19856	46793	46793					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.047	1	27.306	26.806	27.806	1.2594								0	0	0	0.42693	1	10908	10908		0	0	1				40453	49	19773	19856	46794	46794					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2689391970634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.169	1	27.44	26.94	27.94	1.2715								0	0	0	0.42693	1	10959	10959		0	0	1				40454	49	19773	19856	46795	46795					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2690612673759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.297	1	27.569	27.069	28.069	1.2715								0	0	0	0.42693	1	11012	11012		0	0	1				40455	49	19773	19856	46796	46796					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2693054080009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.945	1	29.224	28.724	29.724	1.2789								0	0	0	0.42693	1	11710	11710		0	0	1				40456	49	19773	19856	46797	46797					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.556	1	29.839	29.339	30.339	1.2822								0	0	0	0.42693	1	11972	11972		0	0	1				40457	49	19773	19856	46798	46798					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.747	1	32.029	31.529	32.529	1.2825								0	0	0	0.42693	1	12903	12903		0	0	1				40458	49	19773	19856	46799	46799					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2692138552666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.07	1	32.352	31.852	32.852	1.2813								0	0	0	0.42693	1	13036	13036		0	0	1				40459	49	19773	19856	46800	46800					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.436	1	82.67	82.17	83.17	1.2332								0	0	0	0.42693	1	34188	34188		0	0	1				40460	49	19773	19856	46801	46801					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2676269412041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.3	1	111.47	110.97	111.97	0.16445								0	0	0	0.42693	1	48307	48307		0	0	1				40461	49	19773	19856	46802	46802					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.2677184939384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.39	1	111.56	111.06	112.06	0.16445								0	0	0	0.42693	1	48345	48345		0	0	1				40462	49	19773	19856	46803	46803					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.8671	1	1.6155	1.1155	2.1155	0.7484								0	0	0	0.42693	1	358	358		0	0	1				40463	49	19773	19856	46804	46804					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.96356	1	1.712	1.212	2.212	0.7484								0	0	0	0.42693	1	398	398		0	0	1				40464	49	19773	19856	46805	46805					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0762	1	1.8246	1.3246	2.3246	0.7484								0	0	0	0.42693	1	445	445		0	0	1				40465	49	19773	19856	46806	46806					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1752	1	1.9236	1.4236	2.4236	0.7484								0	0	0	0.42693	1	486	486		0	0	1				40466	49	19773	19856	46807	46807					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2823	1	2.0307	1.5307	2.5307	0.7484								0	0	0	0.42693	1	530	530		0	0	1				40467	49	19773	19856	46808	46808					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3846	1	2.133	1.633	2.633	0.7484								0	0	0	0.42693	1	572	572		0	0	1				40468	49	19773	19856	46809	46809					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2687560915947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4911	1	2.2395	1.7395	2.7395	0.7484								0	0	0	0.42693	1	617	617		0	0	1				40469	49	19773	19856	46810	46810					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680541872978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6289	1	2.3773	1.8773	2.8773	0.7484								0	0	0	0.42693	1	674	674		0	0	1				40470	49	19773	19856	46811	46811					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7311	1	2.4795	1.9795	2.9795	0.7484								0	0	0	0.42693	1	717	717		0	0	1				40471	49	19773	19856	46812	46812					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2690307497978	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8555	1	2.604	2.104	3.104	0.7484								0	0	0	0.42693	1	768	768		0	0	1				40472	49	19773	19856	46813	46813					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2690002322197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9902	1	2.7386	2.2386	3.2386	0.7484								0	0	0	0.42693	1	825	825		0	0	1				40473	49	19773	19856	46814	46814					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.0949	1	2.8433	2.3433	3.3433	0.7484								0	0	0	0.42693	1	868	868		0	0	1				40474	49	19773	19856	46815	46815					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1983	1	2.9467	2.4467	3.4467	0.7484								0	0	0	0.42693	1	912	912		0	0	1				40475	49	19773	19856	46816	46816					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689697146416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2982	1	3.0466	2.5466	3.5466	0.7484								0	0	0	0.42693	1	954	954		0	0	1				40476	49	19773	19856	46817	46817					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4248	1	3.1732	2.6732	3.6732	0.7484								0	0	0	0.42693	1	1006	1006		0	0	1				40477	49	19773	19856	46818	46818					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5195	1	3.2679	2.7679	3.7679	0.7484								0	0	0	0.42693	1	1045	1045		0	0	1				40478	49	19773	19856	46819	46819					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685424685478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6107	1	3.3591	2.8591	3.8591	0.7484								0	0	0	0.42693	1	1083	1083		0	0	1				40479	49	19773	19856	46820	46820					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2688171267509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.7066	1	3.455	2.955	3.955	0.7484								0	0	0	0.42693	1	1123	1123		0	0	1				40480	49	19773	19856	46821	46821					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2687255740166	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8076	1	3.556	3.056	4.056	0.7484								0	0	0	0.42693	1	1165	1165		0	0	1				40481	49	19773	19856	46822	46822					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9058	1	3.6542	3.1542	4.1542	0.7484								0	0	0	0.42693	1	1206	1206		0	0	1				40482	49	19773	19856	46823	46823					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0424	1	3.7908	3.2908	4.2908	0.7484								0	0	0	0.42693	1	1262	1262		0	0	1				40483	49	19773	19856	46824	46824					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1477	1	3.8961	3.3961	4.3961	0.7484								0	0	0	0.42693	1	1306	1306		0	0	1				40484	49	19773	19856	46825	46825					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2419	1	3.9871	3.4871	4.4871	0.74525								0	0	0	0.42693	1	1345	1345		0	0	1				40485	49	19773	19856	46826	46826					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3564	1	4.1016	3.6016	4.6016	0.74525								0	0	0	0.42693	1	1392	1392		0	0	1				40486	49	19773	19856	46827	46827					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4509	1	4.1962	3.6962	4.6962	0.74525								0	0	0	0.42693	1	1431	1431		0	0	1				40487	49	19773	19856	46828	46828					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9269	1	5.6633	5.1633	6.1633	0.73642								0	0	0	0.42693	1	2044	2044		0	0	1				40488	49	19773	19856	46829	46829					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0251	1	5.7615	5.2615	6.2615	0.73642								0	0	0	0.42693	1	2085	2085		0	0	1				40489	49	19773	19856	46830	46830					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1264	1	5.8629	5.3629	6.3629	0.73642								0	0	0	0.42693	1	2127	2127		0	0	1				40490	49	19773	19856	46831	46831					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2687866091728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2579	1	5.9944	5.4944	6.4944	0.73642								0	0	0	0.42693	1	2181	2181		0	0	1				40491	49	19773	19856	46832	46832					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.3651	1	6.1015	5.6015	6.6015	0.73642								0	0	0	0.42693	1	2225	2225		0	0	1				40492	49	19773	19856	46833	46833					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2692443728447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4531	1	6.1895	5.6895	6.6895	0.73642								0	0	0	0.42693	1	2261	2261		0	0	1				40493	49	19773	19856	46834	46834					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684203982353	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6042	1	6.3406	5.8406	6.8406	0.73642								0	0	0	0.42693	1	2324	2324		0	0	1				40494	49	19773	19856	46835	46835					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6936	1	6.4244	5.9244	6.9244	0.73074								0	0	0	0.42693	1	2361	2361		0	0	1				40495	49	19773	19856	46836	46836					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8017	1	6.5325	6.0325	7.0325	0.73074								0	0	0	0.42693	1	2406	2406		0	0	1				40496	49	19773	19856	46837	46837					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9107	1	6.6414	6.1414	7.1414	0.73074								0	0	0	0.42693	1	2451	2451		0	0	1				40497	49	19773	19856	46838	46838					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1817	1	6.9124	6.4124	7.4124	0.73074								0	0	0	0.42693	1	2564	2564		0	0	1				40498	49	19773	19856	46839	46839					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686035037041	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2832	1	7.014	6.514	7.514	0.73074								0	0	0	0.42693	1	2606	2606		0	0	1				40499	49	19773	19856	46840	46840					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2679015994072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4202	1	7.1509	6.6509	7.6509	0.73074								0	0	0	0.42693	1	2664	2664		0	0	1				40500	49	19773	19856	46841	46841					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689086794853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.5935	1	7.3243	6.8243	7.8243	0.73074								0	0	0	0.42693	1	2737	2737		0	0	1				40501	49	19773	19856	46842	46842					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.6941	1	7.4248	6.9248	7.9248	0.73074								0	0	0	0.42693	1	2779	2779		0	0	1				40502	49	19773	19856	46843	46843					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8098	1	7.5405	7.0405	8.0405	0.73074								0	0	0	0.42693	1	2828	2828		0	0	1				40503	49	19773	19856	46844	46844					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.946	1	7.6767	7.1767	8.1767	0.73074								0	0	0	0.42693	1	2884	2884		0	0	1				40504	49	19773	19856	46845	46845					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2688171267509	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0424	1	7.7731	7.2731	8.2731	0.73074								0	0	0	0.42693	1	2925	2925		0	0	1				40505	49	19773	19856	46846	46846					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685119509697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.1599	1	7.8906	7.3906	8.3906	0.73074								0	0	0	0.42693	1	2974	2974		0	0	1				40506	49	19773	19856	46847	46847					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2679931521416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2624	1	7.9932	7.4932	8.4932	0.73074								0	0	0	0.42693	1	3017	3017		0	0	1				40507	49	19773	19856	46848	46848					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2678100466728	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3629	1	8.0937	7.5937	8.5937	0.73074								0	0	0	0.42693	1	3058	3058		0	0	1				40508	49	19773	19856	46849	46849					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5314	1	8.2621	7.7621	8.7621	0.73074								0	0	0	0.42693	1	3128	3128		0	0	1				40509	49	19773	19856	46850	46850					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6303	1	8.3611	7.8611	8.8611	0.73074								0	0	0	0.42693	1	3169	3169		0	0	1				40510	49	19773	19856	46851	46851					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7283	1	8.459	7.959	8.959	0.73074								0	0	0	0.42693	1	3210	3210		0	0	1				40511	49	19773	19856	46852	46852					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8286	1	8.5594	8.0594	9.0594	0.73074								0	0	0	0.42693	1	3252	3252		0	0	1				40512	49	19773	19856	46853	46853					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0257	1	8.7564	8.2564	9.2564	0.73074								0	0	0	0.42693	1	3333	3333		0	0	1				40513	49	19773	19856	46854	46854					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1222	1	8.8567	8.3567	9.3567	0.73452								0	0	0	0.42693	1	3374	3374		0.23584	0	1				40514	49	19773	19856	46855	46855					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2197	1	8.9543	8.4543	9.4543	0.73452								0	0	0	0.42693	1	3415	3415		0	0	1				40515	49	19773	19856	46856	46856					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.3332	1	9.0678	8.5678	9.5678	0.73452								0	0	0	0.42693	1	3463	3463		0	0	1				40516	49	19773	19856	46857	46857					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686340212822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4268	1	9.1613	8.6613	9.6613	0.73452								0	0	0	0.42693	1	3502	3502		0	0	1				40517	49	19773	19856	46858	46858					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2676574587822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.5207	1	9.2552	8.7552	9.7552	0.73452								0	0	0	0.42693	1	3542	3542		0	0	1				40518	49	19773	19856	46859	46859					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683288455009	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.6116	1	9.3461	8.8461	9.8461	0.73452								0	0	0	0.42693	1	3581	3581		0	0	1				40519	49	19773	19856	46860	46860					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2674133181572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7048	1	9.4393	8.9393	9.9393	0.73452								0	0	0	0.42693	1	3620	3620		0	0	1				40520	49	19773	19856	46861	46861					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2675353884697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7986	1	9.5332	9.0332	10.033	0.73452								0	0	0	0.42693	1	3659	3659		0	0	1				40521	49	19773	19856	46862	46862					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680847048759	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.893	1	9.6276	9.1276	10.128	0.73452								0	0	0	0.42693	1	3699	3699		0	0	1				40522	49	19773	19856	46863	46863					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9987	1	9.7332	9.2332	10.233	0.73452								0	0	0	0.42693	1	3743	3743		0	0	1				40523	49	19773	19856	46864	46864					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.1069	1	9.8414	9.3414	10.341	0.73452								0	0	0	0.42693	1	3788	3788		0	0	1				40524	49	19773	19856	46865	46865					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2143	1	9.9488	9.4488	10.449	0.73452								0	0	0	0.42693	1	3834	3834		0	0	1				40525	49	19773	19856	46866	46866					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2677795290947	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3463	1	10.091	9.5909	10.591	0.74462								0	0	0	0.42693	1	3889	3889		0	0	1				40526	49	19773	19856	46867	46867					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.454	1	10.199	9.6986	10.699	0.74462								0	0	0	0.42693	1	3934	3934		0	0	1				40527	49	19773	19856	46868	46868					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5578	1	10.302	9.8024	10.802	0.74462								0	0	0	0.42693	1	3978	3978		0	0	1				40528	49	19773	19856	46869	46869					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2678710818291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.641	1	11.402	10.902	11.902	0.76165								0	0	0	0.42693	1	4423	4423		0.23584	0	1				40529	49	19773	19856	46870	46870					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	10.742	1	11.504	11.004	12.004	0.76165								0	0	0	0.42693	1	4465	4465		0.23584	0	1				40530	49	19773	19856	46871	46871					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.146	1	11.908	11.408	12.408	0.76165								0	0	0	0.42693	1	4631	4631		0	0	1				40531	49	19773	19856	46872	46872					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.673	1	13.461	12.961	13.961	0.78751								0	0	0	0.42693	1	5258	5258		0	0	1				40532	49	19773	19856	46873	46873					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.777	1	13.565	13.065	14.065	0.78751								0	0	0	0.42693	1	5300	5300		0	0	1				40533	49	19773	19856	46874	46874					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.893	1	13.716	13.216	14.216	0.82222								0	0	0	0.42693	1	5347	5347		0	0	1				40534	49	19773	19856	46875	46875					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2685729861259	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.415	1	14.243	13.743	14.743	0.82789								0	0	0	0.42693	1	5562	5562		0	0	1				40535	49	19773	19856	46876	46876					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2673217654228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.594	1	14.421	13.921	14.921	0.82789								0	0	0	0.42693	1	5637	5637		0	0	1				40536	49	19773	19856	46877	46877					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681457400322	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.042	1	15.939	15.439	16.439	0.89664								0	0	0	0.42693	1	6240	6240		0	0	1				40537	49	19773	19856	46878	46878					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683898806572	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.184	1	16.08	15.58	16.58	0.89664								0	0	0	0.42693	1	6299	6299		0	0	1				40538	49	19773	19856	46879	46879					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684509158134	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.298	1	16.194	15.694	16.694	0.89664								0	0	0	0.42693	1	6346	6346		0	0	1				40539	49	19773	19856	46880	46880					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2675353884697	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.28	1	17.32	16.82	17.82	1.0392								0	0	0	0.42693	1	6760	6760		0	0	1				40540	49	19773	19856	46881	46881					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682372927666	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.583	1	17.885	17.385	18.385	1.3023								0	0	0	0.42693	1	6886	6886		0	0	1				40541	49	19773	19856	46882	46882					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2678710818291	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.907	1	18.209	17.709	18.709	1.3023								0	0	0	0.42693	1	7023	7023		0	0	1				40542	49	19773	19856	46883	46883					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2680236697197	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.202	1	18.504	18.004	19.004	1.3023								0	0	0	0.42693	1	7146	7146		0	0	1				40543	49	19773	19856	46884	46884					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681762576103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.638	1	18.941	18.441	19.441	1.3023								0	0	0	0.42693	1	7326	7326		0.23584	0	1				40544	49	19773	19856	46885	46885					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682067751884	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.877	1	19.325	18.825	19.825	1.448								0	0	0	0.42693	1	7428	7428		0	0	1				40545	49	19773	19856	46886	46886					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2695190310478	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.305	1	19.753	19.253	20.253	1.448								0	0	0	0.42693	1	7613	7613		0	0	1				40546	49	19773	19856	46887	46887					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2681152224541	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.92	1	20.367	19.867	20.867	1.448								0	0	0	0.42693	1	7866	7866		0	0	1				40547	49	19773	19856	46888	46888					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2683593630791	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.078	1	20.602	20.102	21.102	1.5237								0	0	0	0.42693	1	7932	7932		0	0	1				40548	49	19773	19856	46889	46889					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2671996951103	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.595	1	21.119	20.619	21.619	1.5237								0	0	0	0.42693	1	8142	8142		0	0	1				40549	49	19773	19856	46890	46890					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.738	1	21.261	20.761	21.761	1.5237								0	0	0	0.42693	1	8203	8203		0	0	1				40550	49	19773	19856	46891	46891					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2698547244072	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.137	1	21.661	21.161	22.161	1.5237								0	0	0	0.42693	1	8373	8373		0	0	1				40551	49	19773	19856	46892	46892					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2699462771416	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.261	1	21.836	21.336	22.336	1.5748								0	0	0	0.42693	1	8425	8425		0	0	1				40552	49	19773	19856	46893	46893					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2696105837822	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.397	1	21.972	21.472	22.472	1.5748								0	0	0	0.42693	1	8485	8485		0	0	1				40553	49	19773	19856	46894	46894					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682983279228	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.35	1	22.953	22.453	23.453	1.6033								0	0	0	0.42693	1	8899	8899		0	0	1				40554	49	19773	19856	46895	46895					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2692443728447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.632	1	25.283	24.783	25.783	1.6511								0	0	0	0.42693	1	9868	9868		0	0	1				40555	49	19773	19856	46896	46896					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.993	1	26.708	26.208	27.208	1.7145								0	0	0	0.42693	1	10445	10445		0	0	1				40556	49	19773	19856	46897	46897					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686950564384	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.279	1	26.996	26.496	27.496	1.7167								0	0	0	0.42693	1	10569	10569		0	0	1				40557	49	19773	19856	46898	46898					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2682678103447	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.44	1	27.156	26.656	27.656	1.7167								0	0	0	0.42693	1	10636	10636		0	0	1				40558	49	19773	19856	46899	46899					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2679626345634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.721	1	27.437	26.937	27.937	1.7167								0	0	0	0.42693	1	10755	10755		0	0	1				40559	49	19773	19856	46900	46900					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689086794853	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.591	1	29.366	28.866	29.866	1.7754								0	0	0	0.42693	1	11549	11549		0	0	1				40560	49	19773	19856	46901	46901					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2686645388603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.831	1	29.606	29.106	30.106	1.7754								0	0	0	0.42693	1	11649	11649		0	0	1				40561	49	19773	19856	46902	46902					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2699157595634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.871	1	31.686	31.186	32.186	1.8151								0	0	0	0.42693	1	12522	12522		0	0	1				40562	49	19773	19856	46903	46903					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2684814333916	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.137	1	31.952	31.452	32.452	1.8151								0	0	0	0.42693	1	12634	12634		0	0	1				40563	49	19773	19856	46904	46904					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2689391970634	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.643	1	32.458	31.958	32.958	1.8151								0	0	0	0.42693	1	12844	12844		0	0	1				40564	49	19773	19856	46905	46905					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2676879763603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.16	1	110.31	109.81	110.81	0.15228								0	0	0	0.42693	1	47782	47782		0	0	1				40565	49	19773	19856	46906	46906					0.22265647447261472
VSRKKKKKK	9	Unmodified	_VSRKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	377.2676879763603	3	377.267909	1128.7819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.28	1	110.43	109.93	110.93	0.15228								0	0	0	0.42693	1	47828	47828		0	0	1				40566	49	19773	19856	46907	46907					0.22265647447261472
VSRKKKKKKK	10	Unmodified	_VSRKKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	629.4485961794853	2	629.445706	1256.87686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.63	1	106.63	106.13	107.13	0								0	0	0	0.66264	1	45532	45532		0	0	1				40567	49	19774	19857	46908	46908					0.25869580918447355
VSRKKKKKKK	10	Unmodified	_VSRKKKKKKK_					0	0	0		AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	AluSp_dup39470|chr16:6350165-6350499:+|1.035558710422393|0.0088428978322734|6.87|429.0|12|3|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	629.4474365115166	2	629.445706	1256.87686	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.1	1	104.26	103.76	104.76	0.16055								0	0	0	0.66264	1	44036	44036		0	0	1				40568	49	19774	19857	46909	46909					0.25869580918447355
VSRKRKAK	8	Unmodified	_VSRKRKAK_					0	0	0		SLC4A1AP|p.S524Qfs*11|1|0.29|ENSG00000163798|chr2:27677356-27677357|-/TCAATTGGTGGGAATGTACAATACAACCTTTT|frameshift_variant;ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	972.6472656130791	1	972.642508	971.635232	1.1912	0.0011586	3.8515	0.0037462	5.0427	0.0049048	972.6456969544729	106.16	0.15261	106.16	106.09	106.25	0					16	7	3	0	0	0	0.89181	1	45242	45242		0.6015	0	1	33866000	+		40569	8690	19775	19858	46910	46910					0.14827970282169645
VSRKRKAK	8	Unmodified	_VSRKRKAK_					0	0	0		SLC4A1AP|p.S524Qfs*11|1|0.29|ENSG00000163798|chr2:27677356-27677357|-/TCAATTGGTGGGAATGTACAATACAACCTTTT|frameshift_variant;ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.6464721560478	1	972.642508	971.635232	2.7757	0.0026997	1.6897	0.0016435	4.4654	0.0043432	972.6442317528641	106.12	0.12302	106.18	106.12	106.25	0.05455					16	5	4	0	0	0	0.89181	1	45147	45147		0.6015	0	1	44077000	+		40570	8690	19775	19858	46911	46911					0.14827970282169645
VSRKRKAK	8	Unmodified	_VSRKRKAK_					0	0	0		SLC4A1AP|p.S524Qfs*11|1|0.29|ENSG00000163798|chr2:27677356-27677357|-/TCAATTGGTGGGAATGTACAATACAACCTTTT|frameshift_variant;ENSG00000163798|ENST00000326019|SLC4A1AP;nc|ENSG00000163798|Q9BWU0-1|SLC4A1AP	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	REV__nc|ENSG00000066933|B2RTY4-5|MYO9A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	972.6472045779228	1	972.642508	971.635232	2.7752	0.0026993	1.9478	0.0018945	4.723	0.0045938	972.644130318472	107.69	0.23943	107.74	107.6	107.84	0.052452					42	12	5	0	0	0	0.89181	1	46079	46079		0.6015	0	1	665770000	+		40571	8690	19775	19858	46912	46912					0.14827970282169645
VSRKRKRKSM	10	Unmodified	_VSRKRKRKSM_					0	0	0			REV__ENST00000485019.1_1_1:235323532-235324526:-|nuORF	REV__ENST00000485019.1_1_1:235323532-235324526:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	425.9315368533134	3	425.931191	1274.77174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.16226	1	0.3207	-0.1793	0.8207	0.15844								0	0	0	0.66264	1	67	67		0	0	1		+		40572	11583	19776	19859	46913	46913					0.14534716450361884
VSRLLVEH	8	Unmodified	_VSRLLVEH_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1916381716728	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.934	1	69.256	68.756	69.756	0.32224								0	0	0	1.0178	1	28855	28855		0.45834	0	1				40573	5432	19777	19860	46914	46914					0.07245180025711306
VSRLLVEH	8	Unmodified	_VSRLLVEH_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MSMS	GG20161007_CRH_Patient100_A02_02	2	318.1916686892509	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.114	1	69.436	68.936	69.936	0.32224								0	0	0	1.0178	1	28930	28930		0.45834	0	1				40574	5432	19777	19860	46915	46915					0.07245180025711306
VSRLLVEH	8	Unmodified	_VSRLLVEH_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MSMS	GG20161007_CRH_Patient100_W632_01	3	318.1912719607353	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.372	1	80.638	80.138	81.138	1.2668								0	0	0	1.0178	1	33315	33315		0.45834	0	1				40575	5432	19777	19860	46916	46916					0.07245180025711306
VSRLLVEH	8	Unmodified	_VSRLLVEH_					0	0	0		ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	ENSG00000265203|ENST00000584701|RBP3	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.1918823122978	3	318.190665	951.550165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.116	1	82.812	82.312	83.312	1.6959								0	0	0	1.0178	1	34030	34030		0.45834	0	1				40576	5432	19777	19860	46917	46917					0.07245180025711306
VSRLPALLIP	10	Unmodified	_VSRLPALLIP_					0	0	0			REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2371093630791	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.24	1	102.3	101.8	102.8	0.062805								0	0	0	0.66161	1	42816	42816		1.7423	0.96574	1		+		40577	13831	19778	19861	46918	46918					0.15527758679127146
VSRLPALLIP	10	Unmodified	_VSRLPALLIP_					0	0	0			REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2375976443291	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.13	1	102.31	101.81	102.81	0.17032								0	0	0	0.66161	1	42982	42982		1.7423	0.96574	1		+		40578	13831	19778	19861	46919	46919					0.15527758679127146
VSRLPALLIP	10	Unmodified	_VSRLPALLIP_					0	0	0			REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	REV__ENST00000551357.2_1_12:113918017-113918194:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2374145388603	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.08	1	102.27	101.77	102.77	0.19076								0	0	0	0.66161	1	42925	42925		1.7423	0.96574	1		+		40579	13831	19778	19861	46920	46920					0.15527758679127146
VSRLRRRPLL	10	Unmodified	_VSRLRRRPLL_					0	0	0		ENST00000310653.10_2_11:73471690-73471855:-|nuORF	ENST00000310653.10_2_11:73471690-73471855:-|nuORF	ENST00000310653.10_2_11:73471690-73471855:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.4224731326103	2	633.41748	1264.82041	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.18	1	107.34	106.84	107.84	0.15914								0	0	0	0.66237	1	45985	45985		0.45834	0	1				40580	5802	19779	19862	46921	46921					0.19858953081779873
VSRPDEENIT	10	Unmodified	_VSRPDEENIT_					0	0	0		ENST00000595476.1_1_19:39869154-39871842:+|nuORF;ENSG00000179134|ENST00000610417|SAMD4B	ENST00000595476.1_1_19:39869154-39871842:+|nuORF	ENST00000595476.1_1_19:39869154-39871842:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1159.564135730267	1	1159.55896	1158.55168	2.8821	0.0033419	2.0163	0.002338	4.8984	0.00568	1159.5619900242816	104.56	0.080902	104.73	104.67	104.75	0.1731					10	3	4	0	0	0	0.89803	1	44270	44270		0.35063	0	1	39191000			40581	4506	19780	19863	46922	46922					-0.021252754668466878
VSRRRRTAPQP	11	Unmodified	_VSRRRRTAPQP_					0	0	0			REV__CON__Q2UVX4	REV__CON__Q2UVX4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.2637817263603	3	441.928726	1322.76435	2.0721	0.00091572	-1.5287	-0.00067557	0.54341	0.00024015	441.927720242359	38.759	0.59751	39.067	38.888	39.485	0.30857					37	19	2	0	0	0	1.0375	1	16393	16393		0.92553	0.22787	1	871910	+	+	40582	8388	19781	19864	46923	46923					0.11587700174300153
VSRRRRTKK	9	Unmodified	_VSRRRRTKK_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MSMS	GG20161007_CRH_Patient100_A02_02	2	396.2593566775322	3	396.258295	1185.75306	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.648	1	93.793	93.293	94.293	0.14493								0	0	0	0.42693	1	39200	39200		0.26902	0.1097	1				40583	4793	19782	19865	46924	46924					0.1676092287082156
VSRSPLWI	8	Unmodified	_VSRSPLWI_					0	0	0		ENST00000262158.6_1_18:46448052-46468913:-|nuORF	ENST00000262158.6_1_18:46448052-46468913:-|nuORF	ENST00000262158.6_1_18:46448052-46468913:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2794677615166	2	479.279452	956.544351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.375	1	65.319	64.819	65.819	1.9444								0	0	0	1.0178	1	26591	26591		6.3541	1.1234	1				40584	5632	19783	19866	46925	46925					0.0643408151404401
VSRTLVTI	8	Unmodified	_VSRTLVTI_					0	0	0		ENST00000528173.5_1_11:46390827-46391010:+|nuORF	ENST00000528173.5_1_11:46390827-46391010:+|nuORF	ENST00000528173.5_1_11:46390827-46391010:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	444.7809020876884	2	444.779285	887.544017	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.05	1	104.05	103.55	104.55	0								0	0	0	1.0178	1	43843	43843		12.532	0	1				40585	7144	19784	19867	46926	46926					0.09574661794192707
VSSKILIG	8	Unmodified	_VSSKILIG_					0	0	0			REV__tr|A0A553SGH1|A0A553SGH1_NIACISporegernimationproteinKCOS=NialliacirculansOX=1397GN=CEQ21_10805PE=3SV=1	REV__tr|A0A553SGH1|A0A553SGH1_NIACISporegernimationproteinKCOS=NialliacirculansOX=1397GN=CEQ21_10805PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	408.7310974001884	2	408.763104	815.511654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.431	1	55.752	55.252	56.252	0.32088								0	0	0	1.0178	1	23207	23207		0	0	1		+		40586	14747	19785	19868	46927	46927					0.09651874391204274
VSSLALKEL	9	Unmodified	_VSSLALKEL_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.2935363650322	2	480.292225	958.569897	2.3134	0.0011111	-0.04065	-1.9524E-05	2.2728	0.0010916	480.29208031729837	47.159	0.22024	48.541	48.41	48.63	1.3825					11	6	2	0	0	0	0.42305	1	19733	19733		19.257	0	1	810340	+		40587	11425	19786	19869	46928	46928					0.08895511245816579
VSSLALKEL	9	Unmodified	_VSSLALKEL_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	480.292225	958.569897	2.3134	0.0011111	-0.04065	-1.9524E-05	2.2728	0.0010916	480.29208031729837	47.159	0.22024	48.541	48.41	48.63	1.3825	-0.045184	6.8049E-05	NaN	19.257	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810340	+		40588	11425	19786	19869							0.08895511245816579
VSSLALKEL	9	Unmodified	_VSSLALKEL_					0	0	0			REV__ENSG00000184445|ENST00000333479|KNTC1	REV__ENSG00000184445|ENST00000333479|KNTC1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	480.292225	958.569897	1.8363	0.00088197	-0.17136	-8.2305E-05	1.6649	0.00079966	480.2919898324444	46.661	0.23778	48.632	48.503	48.741	1.9703	0.045184	-5.7512E-05	NaN	19.257	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	444820	+		40589	11425	19786	19869							0.08895511245816579
VSSLGPLG	8	Unmodified	_VSSLGPLG_					0	0	0			REV__MKI67|p.G1790Rfs*43|1|0.03|ENSG00000148773|chr10:128106473-128106474|-/TTTCCCTG|frameshift_variant	REV__MKI67|p.G1790Rfs*43|1|0.03|ENSG00000148773|chr10:128106473-128106474|-/TTTCCCTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	729.4180786013603	1	729.414131	728.406855	1.3851	0.0010103	2.9211	0.0021307	4.3062	0.003141	729.4159717307184	108.02	0.15771	108.02	107.93	108.09	0					18	7	3	0	0	0	0.89178	1	46438	46438		0.69038	0	1	94918000	+		40590	10354	19787	19870	46929	46929					0.031787529146299676
VSSLSGGV	8	Unmodified	_VSSLSGGV_					0	0	0			REV__nc|ENSG00000136715|Q9H0E3-2|SAP130	REV__nc|ENSG00000136715|Q9H0E3-2|SAP130	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	353.2314941287041	2	353.192511	704.370469	2.4193	0.00085448	4.1863	0.0014786	6.6057	0.0023331	353.1954031490507	99.017	0.69852	99.098	98.875	99.573	0.080376					27	22	2	0	0	0	2.3239	1	41642	41642		0	0	1	1200600	+		40591	9990	19788	19871	46930	46930					0.006458760179157252
VSSLSGGV	8	Unmodified	_VSSLSGGV_					0	0	0			REV__nc|ENSG00000136715|Q9H0E3-2|SAP130	REV__nc|ENSG00000136715|Q9H0E3-2|SAP130	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	353.192511	704.370469	-1.6137	-0.00056994	4.9126	0.0017351	3.2989	0.0011651	353.1963600549684	99.185	0.44862	99.185	98.96	99.409	0	0.043786	0.00036178	NaN	0	29	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1577700	+		40592	9990	19788	19871							0.006458760179157252
VSSPRRRARL	10	Unmodified	_VSSPRRRARL_					0	0	0			REV__ENST00000372621.8_1_1:41445408-41445486:+|nuORF	REV__ENST00000372621.8_1_1:41445408-41445486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1197.733447253704	1	1197.7287	1196.72142	2.7562	0.0033011	1.3676	0.001638	4.1237	0.0049391	1197.7305439633658	107.43	0.15218	107.59	107.51	107.66	0.15781					23	7	4	0	0	0	0.89803	1	46195	46195		0.40072	0	1	39838000	+		40593	12681	19789	19872	46931	46931					0.13092930116886237
VSTCSSHLIV	10	Unmodified	_VSTCSSHLIV_					0	0	0		ENSG00000187080|ENST00000366480|OR2AK2;nc|ENSG00000187080|Q8NG84|OR2AK2	ENSG00000187080|ENST00000366480|OR2AK2	ENSG00000187080|ENST00000366480|OR2AK2	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.2726928591728	2	523.270967	1044.52738	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.988	1	52.314	51.814	52.814	0.32553								0	0	0	0.64929	1	21780	21780		14.838	0.93222	1				40594	4815	19790	19873	46932	46932					0.006897928459011382
VSTDIINTL	9	Unmodified	_VSTDIINTL_					0	0	0		ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2714416384697	2	488.27149	974.528426	0.53888	0.00026312	-2.8188	-0.0013763	-2.2799	-0.0011132	488.2712746526378	56.292	0.47646	57.702	57.551	58.028	1.4099					33	15	3	0	0	0	0.0075027	2	23615	23562;23615		112.59	32.615	1	13075000			40595	1030	19791	19874	46933;46934	46934					0.0401433048649551
VSTDIINTL	9	Unmodified	_VSTDIINTL_					0	0	0		ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	975.5383178591728	1	975.535703	974.528426	0.45334	0.00044225	1.1958	0.0011665	1.6491	0.0016088	975.5352567842345	56.295	0.35204	57.705	57.551	57.903	1.4099					20	11	3	0	0	0	0.0066739	2	23635	23570;23635		115.69	11.944	1	6569800			40596	1030	19791	19874	46935;46936	46936					0.0401433048649551
VSTDIINTL	9	Unmodified	_VSTDIINTL_					0	0	0		ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.2718078494072	2	488.27149	974.528426	0.81979	0.00040028	-0.42747	-0.00020872	0.39232	0.00019156	488.2714337019701	55.796	0.33397	57.764	57.599	57.933	1.9684					20	11	2	0	0	0	0.049839	1	23369	23369		68.081	18.148	1	10042000			40597	1030	19791	19874	46937	46937					0.0401433048649551
VSTDIINTL	9	Unmodified	_VSTDIINTL_					0	0	0		ENSG00000082438|ENST00000652658|COBLL1;nc|ENSG00000082438|Q53SF7-3|COBLL1;nc|ENSG00000082438|Q53SF7-2|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	ENSG00000082438|ENST00000652658|COBLL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	975.5365478396416	1	975.535703	974.528426	0.67594	0.0006594	0.24311	0.00023716	0.91904	0.00089656	975.5350079110415	55.805	0.29193	57.773	57.641	57.933	1.9684					18	9	3	0	0	0	0.026836	1	23421	23421		92.491	10.601	1	3533600			40598	1030	19791	19874	46938	46938					0.0401433048649551
VSTDQQTLRQQ	11	Unmodified	_VSTDQQTLRQQ_					0	0	0			REV__ENST00000526500.5_1_11:111859671-111889757:+|nuORF	REV__ENST00000526500.5_1_11:111859671-111889757:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	434.8851806521416	3	435.224874	1302.65279	-0.21286	-9.2641E-05	-1.9471	-0.00084744	-2.16	-0.00094008	435.22404361719225	10.076	0.18633	10.727	10.613	10.799	0.65058					6	5	2	0	0	0	0.14606	1	4212	4212		1.3296	0.11481	1	351290	+		40599	10388	19792	19875	46939	46939					0.013571762358424166
VSTGKIAK	8	Unmodified	_VSTGKIAK_					0	0	0		ENST00000503601.1_1_4:2083186-2091962:-|nuORF;nc|ENSG00000112339|Q9Y450-2|HBS1L;HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant;HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant;nc|ENSG00000112339|Q9Y450-4|HBS1L;ENSG00000112339|ENST00000367837|HBS1L	ENST00000503601.1_1_4:2083186-2091962:-|nuORF;HBS1L|p.N217Kfs*64|1|0.04|ENSG00000112339|chr6:134997545-134997546|-/AATCAGCTTATGATTTTTACTGTTTTTTTTC|frameshift_variant;HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant	HBS1L|p.T291Kfs*15|1|0.36|ENSG00000112339|chr6:134996842-134996870|TTTAGACTCCTGTTCATACTTATGCATAG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1819946169853	2	402.252903	802.491253	4.5419	0.001827	-2.6936	-0.0010835	1.8483	0.0007435	402.2522694684746	87.363	0.37263	88.858	88.642	89.015	1.4953					17	11	2	0	0	0	2.3239	1	36829	36829		0	0	1	681800			40600	6988;7615;1780	19793	19876	46940	46940					0.08210703731356261
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3228637576103	2	509.322471	1016.63039	1.9124	0.00097404	0.14521	7.3958E-05	2.0576	0.001048	509.32255318877435	71.928	0.72813	71.928	71.668	72.396	0					54	22	4	0	0	0	0.049839	3	29959	29913;29959;30001		68.081	22.552	1	7535600	+		40601	8993	19794	19877	46941;46942;46943	46942					0.12273905304550681
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	509.3234741091728	2	509.322471	1016.63039	1.7597	0.00089624	1.202	0.00061218	2.9616	0.0015084	509.32280786803705	71.216	0.76572	71.54	71.271	72.037	0.32359					56	23	4	0	0	0	0.037761	2	29810	29773;29810		78.149	22.381	1	9020700	+		40602	8993	19794	19877	46944;46945	46945					0.12273905304550681
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.3241454958916	2	509.322471	1016.63039	3.0756	0.0015665	0.16214	8.2581E-05	3.2378	0.0016491	509.32271327798026	69.904	1.2932	71.257	70.99	72.284	1.3536					110	40	6	0	0	0	0.037761	3	29328	29328;29367;29406		78.149	17.76	1	55780000	+		40603	8993	19794	19877	46946;46947;46948	46946					0.12273905304550681
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.3239929080009	2	509.322471	1016.63039	2.2575	0.0011498	0.56105	0.00028575	2.8185	0.0014355	509.3229050537749	69.383	0.94395	71.236	70.92	71.864	1.853					81	29	5	0	0	0	0.037761	3	29170	29045;29131;29170		78.149	12.979	1	37004000	+		40604	8993	19794	19877	46949;46950;46951	46951					0.12273905304550681
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	509.322471	1016.63039	1.9124	0.00097404	0.14521	7.3958E-05	2.0576	0.001048	509.32255318877435	71.928	0.72813	71.928	71.668	72.396	0	0.1942	-0.00050373	NaN	78.149	54	22	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7535600	+		40605	8993	19794	19877							0.12273905304550681
VSTILKIIM	9	Unmodified	_VSTILKIIM_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	509.322471	1016.63039	1.7597	0.00089624	1.202	0.00061218	2.9616	0.0015084	509.32280786803705	71.216	0.76572	71.54	71.271	72.037	0.32359	-0.1942	0.00057272	NaN	78.149	56	23	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9020700	+		40606	8993	19794	19877							0.12273905304550681
VSTPAAAC	8	Unmodified	_VSTPAAAC_					0	0	0		nc|ENSG00000162981|Q96KN4-2|LRATD1	REV__ENST00000444469.3_1_19:55890631-55890727:-|nuORF	REV__ENST00000444469.3_1_19:55890631-55890727:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	719.3404418826103	1	719.339252	718.331975	2.7075	0.0019476	-0.59295	-0.00042653	2.1145	0.0015211	719.3389214442933	103.63	0.13142	103.69	103.62	103.75	0.059502					13	6	3	0	0	0	0.89198	1	43509	43509		0	0	1	52505000			40607	7909	19795	19878	46952	46952					-0.03845752888275911
VSTPAAAC	8	Unmodified	_VSTPAAAC_					0	0	0		nc|ENSG00000162981|Q96KN4-2|LRATD1	REV__ENST00000444469.3_1_19:55890631-55890727:-|nuORF	REV__ENST00000444469.3_1_19:55890631-55890727:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	719.3398925662041	1	719.339252	718.331975	2.618	0.0018832	-1.5269	-0.0010984	1.0911	0.00078485	719.3382471534446	103.57	0.18524	103.74	103.64	103.83	0.16445					15	8	3	0	0	0	0.89198	1	43692	43692		0	0	1	38209000			40608	7909	19795	19878	46953	46953					-0.03845752888275911
VSVGVGGP	8	Unmodified	_VSVGVGGP_					0	0	0		ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	ENSG00000198576|ENST00000356613|ARC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	336.1909973025322	2	336.189771	670.36499	-0.1346	-4.5252E-05	3.2916	0.0011066	3.157	0.0010614	336.1907018803805	19.377	0.30269	20.901	20.805	21.108	1.5237					18	9	2	0	0	0	0.89176	1	8074	8074		0.79363	0	1	501490			40609	5057	19796	19879	46954	46954					0.016621972261077644
VSVKNNLTTK	10	Unmodified	_VSVKNNLTTK_					0	0	0		nc|ENSG00000163092|A4UGR9-2|XIRP2;nc|ENSG00000163092|A4UGR9-3|XIRP2;nc|ENSG00000163092|A4UGR9|XIRP2;ENSG00000163092|ENST00000409195|XIRP2	nc|ENSG00000163092|A4UGR9-2|XIRP2	nc|ENSG00000163092|A4UGR9-2|XIRP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.3271972537041	2	552.324588	1102.63462	1.2075	0.00066692	3.2482	0.001794	4.4556	0.002461	552.3267328869946	96.019	0.19972	96.019	95.92	96.12	0					11	6	2	0	0	0	0.89803	1	40150	40150		1.3295	0.63916	1	1604300			40610	3663	19797	19880	46955	46955					0.08741086051759339
VSVKVGLP	8	Unmodified	_VSVKVGLP_					0	0	0			REV__ENSG00000161267|ENST00000392379|BDH1	REV__ENSG00000161267|ENST00000392379|BDH1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	399.7576476931572	2	399.757821	797.501089	2.0682	0.00082679	-3.0077	-0.0012023	-0.93943	-0.00037554	399.7567495768662	77.302	0.47754	78.583	78.346	78.823	1.2809					39	14	4	0	0	0	0.89176	1	32511	32511		0.79363	0	1	4166400	+		40611	10619	19798	19881	46956	46956					0.09423891736753376
VSVPFPVTH	9	Unmodified	_VSVPFPVTH_					0	0	0		ENST00000358227.4_1_9:7798435-7799537:-|nuORF	ENST00000358227.4_1_9:7798435-7799537:-|nuORF	ENST00000358227.4_1_9:7798435-7799537:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.7724792361259	2	491.77146	981.528367	1.6574	0.00081507	0.16062	7.8987E-05	1.818	0.00089406	491.77126503252873	42.919	0.37909	44.259	44.046	44.425	1.3399					19	11	2	0	0	0	0.19075	1	17994	17994		34.102	17.16	1	1157500			40612	6010	19799	19882	46957	46957					0.036863752771296276
VSVPFPVTH	9	Unmodified	_VSVPFPVTH_					0	0	0		ENST00000358227.4_1_9:7798435-7799537:-|nuORF	ENST00000358227.4_1_9:7798435-7799537:-|nuORF	ENST00000358227.4_1_9:7798435-7799537:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.7722045779228	2	491.77146	981.528367	1.8473	0.00090846	0.10923	5.3716E-05	1.9566	0.00096218	491.7715459517168	42.298	0.28104	44.22	44.103	44.384	1.9211					15	8	3	0	0	0	0.19075	1	17734	17734		34.102	17.16	1	766010			40613	6010	19799	19882	46958	46958					0.036863752771296276
VSVPLIVRY	9	Unmodified	_VSVPLIVRY_					0	0	0		ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3243896365166	2	523.32386	1044.63317	1.6715	0.00087473	-0.035981	-1.883E-05	1.6355	0.0008559	523.3237548915203	54.883	0.56419	56.288	55.964	56.528	1.4048					57	18	4	0	0	0	0.04145	4	22934	22889;22934;22984;23046		74.929	40.827	1	46624000			40614	2205	19800	19883	46959;46960;46961;46962	46960					0.11263496753713298
VSVPLIVRY	9	Unmodified	_VSVPLIVRY_					0	0	0		ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	ENSG00000124098|ENST00000371384|FAM210B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3245727419853	2	523.32386	1044.63317	2.0179	0.001056	-0.43357	-0.0002269	1.5844	0.00082913	523.323532293383	54.365	0.58195	56.334	56.001	56.583	1.9684					56	18	4	0	0	0	0.01454	4	22735	22691;22735;22774;22813		103.75	43.177	1	46209000			40615	2205	19800	19883	46963;46964;46965;46966	46964					0.11263496753713298
VSVRHGRKTK	10	Unmodified	_VSVRHGRKTK_					0	0	0		SH3KBP1|p.S575Gfs*71|1|0.08|ENSG00000147010|chrX:19542094-19542095|-/TTGATTCTCTCAAGAAACAGCTAACTGATCC|frameshift_variant	SH3KBP1|p.S575Gfs*71|1|0.08|ENSG00000147010|chrX:19542094-19542095|-/TTGATTCTCTCAAGAAACAGCTAACTGATCC|frameshift_variant	SH3KBP1|p.S575Gfs*71|1|0.08|ENSG00000147010|chrX:19542094-19542095|-/TTGATTCTCTCAAGAAACAGCTAACTGATCC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	584.3578369021416	2	584.357088	1166.69962	2.4547	0.0014344	-1.2333	-0.0007207	1.2214	0.00071375	584.3564016151166	74.796	2.0741	75.121	74.138	76.212	0.32463					165	65	4	0	0	0	0.89803	1	31346	31346		0.45834	0	1	7390500			40616	15954	19801	19884	46967	46967					0.12294125368293862
VSVRRKSIK	9	Unmodified	_VSVRRKSIK_					0	0	0			REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	REV__ENST00000442009.6_1_9:37489340-37503196:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	358.2359802126884	3	358.236497	1071.68766	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.366	1	53.366	52.866	53.866	0								0	0	0	0.42693	1	22253	22253		0.26902	0	1		+		40617	10009	19802	19885	46968	46968					0.15468508625099275
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.2916137576103	2	552.290214	1102.56587	1.2217	0.00067471	-1.549	-0.00085552	-0.32738	-0.00018081	552.289560711714	95.903	0.23246	95.903	95.773	96.005	0					13	7	3	0	0	0	0.44465	1	40090	40090		30.637	9.7653	1	3101300	+		40618	10229	19803	19886	46969	46969					0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	552.2950317263603	2	552.290214	1102.56587	2.6707	0.001475	3.0194	0.0016676	5.69	0.0031425	552.2922939900283	95.645	0.26168	95.768	95.622	95.883	0.12331					13	8	2	0	0	0	0.57775	1	40013	40013		24.021	5.8742	1	1757300	+		40619	10229	19803	19886	46970	46970					0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2911865115166	2	552.290214	1102.56587	3.9237	0.002167	1.2761	0.00070479	5.1998	0.0028718	552.2906746817551	95.067	0.43349	95.808	95.519	95.952	0.74124					33	15	3	0	0	0	0.35292	2	39993	39942;39993		36.127	9.0464	1	4935400	+		40620	10229	19803	19886	46971;46972	46972					0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2924072146416	2	552.290214	1102.56587	3.1784	0.0017554	0.70835	0.00039121	3.8867	0.0021466	552.2906389645564	94.572	0.45626	95.761	95.559	96.015	1.1887					32	14	3	0	0	0	0.44465	2	39769	39769;39820		30.637	10.222	1	4999300	+		40621	10229	19803	19886	46973;46974	46973					0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	552.290214	1102.56587	1.2217	0.00067471	-1.549	-0.00085552	-0.32738	-0.00018081	552.289560711714	95.903	0.23246	95.903	95.773	96.005	0	0.092994	-0.0027823	NaN	36.127	13	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3101300	+		40622	10229	19803	19886							0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	552.290214	1102.56587	2.6707	0.001475	3.0194	0.0016676	5.69	0.0031425	552.2922939900283	95.645	0.26168	95.768	95.622	95.883	0.12331	-0.041696	0.0022638	NaN	36.127	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1757300	+		40623	10229	19803	19886							0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	552.290214	1102.56587	3.9237	0.002167	1.2761	0.00070479	5.1998	0.0028718	552.2906746817551	95.067	0.43349	95.808	95.519	95.952	0.74124	-0.0021828	0.00033829	NaN	36.127	33	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4935400	+		40624	10229	19803	19886							0.018694217520987877
VSVSHEVTFV	10	Unmodified	_VSVSHEVTFV_					0	0	0			REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	REV__ENST00000493315.1_1_2:63631156-63711794:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	552.290214	1102.56587	3.1784	0.0017554	0.70835	0.00039121	3.8867	0.0021466	552.2906389645564	94.572	0.45626	95.761	95.559	96.015	1.1887	-0.049116	-0.00028885	NaN	36.127	32	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4999300	+		40625	10229	19803	19886							0.018694217520987877
VSVTTTKDVSN	11	Unmodified	_VSVTTTKDVSN_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8032714724541	2	575.801143	1149.58773	1.8877	0.0010869	2.6106	0.0015032	4.4984	0.0025902	575.8024212264897	54.852	0.33045	55.173	54.989	55.32	0.32088					23	11	3	0	0	0	0.74096	2	22934	22934;22980		17.113	7.039	1	3126500	+		40626	10214	19804	19887	46975;46976	46975					0.01892181710013574
VSVTTTKDVSN	11	Unmodified	_VSVTTTKDVSN_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	575.801143	1149.58773	1.763	0.0010152	2.6155	0.001506	4.3786	0.0025212	575.8024933541884	55.342	0.29988	55.342	55.162	55.462	0	0.084991	2.873E-06	NaN	17.113	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2980900	+		40627	10214	19804	19887							0.01892181710013574
VSVTTTKDVSN	11	Unmodified	_VSVTTTKDVSN_					0	0	0			REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	REV__nc|ENSG00000143442|Q7Z3K3-5|POGZ	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	575.801143	1149.58773	1.8877	0.0010869	2.6106	0.0015032	4.4984	0.0025902	575.8024212264897	54.852	0.33045	55.173	54.989	55.32	0.32088	-0.084991	-2.7358E-06	NaN	17.113	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3126500	+		40628	10214	19804	19887							0.01892181710013574
VSVVLLRM	8	Unmodified	_VSVVLLRM_					0	0	0		ENST00000361283.2_1_13:115091786-115091906:+|nuORF	ENST00000361283.2_1_13:115091786-115091906:+|nuORF	ENST00000361283.2_1_13:115091786-115091906:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1918212771416	3	306.193129	915.557558	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.659	1	90.659	90.159	91.159	0								0	0	0	1.0178	1	37893	37893		0.45834	0	1				40629	6035	19805	19888	46977	46977					0.09640196301768356
VSYLRRLDR	9	Unmodified	_VSYLRRLDR_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3434936404228	2	589.343646	1176.67274	2.0327	0.0011979	-2.3839	-0.0014049	-0.35117	-0.00020696	589.3421321319817	74.901	2.0207	74.901	74.206	76.226	0					125	63	3	0	0	0	0.83753	1	31239	31239		1.8442	0.19162	1	2129700	+		40630	11638	19806	19889	46978	46978					0.09147016757128767
VSYLRRLDR	9	Unmodified	_VSYLRRLDR_					0	0	0			REV__ENSG00000196557|ENST00000348261|CACNA1H	REV__ENSG00000196557|ENST00000348261|CACNA1H	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3447753787041	2	589.343646	1176.67274	2.4806	0.0014619	-1.6735	-0.00098625	0.80713	0.00047568	589.3424543925346	74.696	1.4803	75.021	74.201	75.681	0.32463					106	46	3	0	0	0	0.77526	2	31257	31207;31257		4.3292	0.36234	1	2982700	+		40631	11638	19806	19889	46979;46980	46980					0.09147016757128767
VSYNVDVRFRS	11	Unmodified	_VSYNVDVRFRS_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	671.3516113162041	2	671.349126	1340.6837	1.7125	0.0011497	2.4986	0.0016774	4.2111	0.0028271	671.3508565868348	43.636	0.27515	44.989	44.825	45.1	1.3536					18	8	3	0	0	0	0.92747	1	18303	18303		8.1555	0	1	1640900			40632	5384	19807	19890	46981	46981					0.026983743407527072
VSYNVDVRFRS	11	Unmodified	_VSYNVDVRFRS_					0	0	0		nc|ENSG00000251692|Q96A99-2|PTX4;ENSG00000251692|ENST00000447419|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	nc|ENSG00000251692|Q96A99-2|PTX4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	671.3513061404228	2	671.349126	1340.6837	1.6225	0.0010892	1.7436	0.0011706	3.3661	0.0022598	671.3508727555502	43.013	0.26862	44.935	44.781	45.049	1.9211					24	8	4	0	0	0	0.92747	1	18006	18006		8.1555	0	1	2516800			40633	5384	19807	19890	46982	46982					0.026983743407527072
VSYQEIIISI	10	Unmodified	_VSYQEIIISI_					0	0	0			REV__nc|ENSG00000146414|Q149N8-4|SHPRH	REV__nc|ENSG00000146414|Q149N8-4|SHPRH	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	388.1860229372978	3	388.88854	1163.64379	1.0265	0.00039921	4.0372	0.00157	5.0638	0.0019692	388.8901940992814	38.667	0.31915	40.504	40.335	40.654	1.8366					12	9	2	0	0	0	0.12549	1	16182	16182		3.5871	0	1	553500	+		40634	10302	19808	19891	46983	46983					0.06851434617487939
VTAAVYWP	8	Unmodified	_VTAAVYWP_					0	0	0			REV__nc|ENSG00000080493|Q9Y6R1-2|SLC4A4;REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5;REV__nc|ENSG00000188687|Q9BY07-4|SLC4A5	REV__nc|ENSG00000188687|Q9BY07-8|SLC4A5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	453.7404662966728	2	453.739628	905.464704	2.4808	0.0011256	-3.3027	-0.0014985	-0.82184	-0.0003729	453.73913403236384	63.648	0.48545	63.977	63.756	64.241	0.32899					40	15	3	0	0	0	0.89008	1	26772	26772		2.5775	0.27475	1	1882600	+		40635	8807;11580;14513	19809	19892	46984	46984					0.008190148400444741
VTADDYGII	9	Unmodified	_VTADDYGII_					0	0	0		nc|ENSG00000165521|Q05BV3|EML5;ENSG00000165521|ENST00000554922|EML5;nc|ENSG00000165521|Q05BV3-2|EML5;nc|ENSG00000165521|Q05BV3-4|EML5	nc|ENSG00000165521|Q05BV3|EML5	nc|ENSG00000165521|Q05BV3|EML5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	966.4798461794853	1	966.477854	965.470577	1.6202	0.0015659	-0.51857	-0.00050119	1.1016	0.0010647	966.4777162429059	67.78	0.31492	67.78	67.601	67.915	0					19	9	3	0	0	0	0.1735	1	28212	28212		36.044	1.9418	1	866330			40636	3843	19810	19893	46985	46985					-0.01353931438939071
VTAEEIKTK	9	Unmodified	_VTAEEIKTK_					0	0	0			REV__ENSG00000249581|ENST00000511148|CLRN2	REV__ENSG00000249581|ENST00000511148|CLRN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7941161990166	2	509.792589	1017.57063	3.3126	0.0016887	0.31912	0.00016269	3.6317	0.0018514	509.79266852308535	61.524	0.43184	62.942	62.744	63.176	1.4177					43	13	4	0	0	0	0.40005	1	25806	25806		28.487	0	1	17687000	+		40637	11946	19811	19894	46986	46986					0.06254305894867684
VTAEEIKTK	9	Unmodified	_VTAEEIKTK_					0	0	0			REV__ENSG00000249581|ENST00000511148|CLRN2	REV__ENSG00000249581|ENST00000511148|CLRN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7952758669853	2	509.792589	1017.57063	2.8512	0.0014535	0.36019	0.00018362	3.2114	0.0016371	509.7926997182024	60.991	0.49161	62.957	62.79	63.282	1.9653					44	15	4	0	0	0	0.3091	1	25562	25562		34.102	5.6156	1	13108000	+		40638	11946	19811	19894	46987	46987					0.06254305894867684
VTAEEIKTK	9	Unmodified	_VTAEEIKTK_					0	0	0			REV__ENSG00000249581|ENST00000511148|CLRN2	REV__ENSG00000249581|ENST00000511148|CLRN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	509.792589	1017.57063	3.3126	0.0016887	0.31912	0.00016269	3.6317	0.0018514	509.79266852308535	61.524	0.43184	62.942	62.744	63.176	1.4177	-0.069862	-0.00010327	NaN	34.102	43	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17687000	+		40639	11946	19811	19894							0.06254305894867684
VTAEEIKTK	9	Unmodified	_VTAEEIKTK_					0	0	0			REV__ENSG00000249581|ENST00000511148|CLRN2	REV__ENSG00000249581|ENST00000511148|CLRN2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	509.792589	1017.57063	2.8512	0.0014535	0.36019	0.00018362	3.2114	0.0016371	509.7926997182024	60.991	0.49161	62.957	62.79	63.282	1.9653	-0.055108	-6.1392E-05	NaN	34.102	44	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13108000	+		40640	11946	19811	19894							0.06254305894867684
VTAHYEVI	8	Unmodified	_VTAHYEVI_					0	0	0		tr|A0A7D6W1R7|A0A7D6W1R7_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03705PE=4SV=1	tr|A0A7D6W1R7|A0A7D6W1R7_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03705PE=4SV=1	tr|A0A7D6W1R7|A0A7D6W1R7_9CLOTGfo/Idh/MocAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03705PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	466.2474853396416	2	466.247818	930.481082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.067	1	65.474	64.974	65.974	1.4071								0	0	0	1.0178	1	26867	26867		9.3474	0	1				40641	17022	19812	19895	46988	46988					0.013060960061352489
VTAIKEGSL	9	Unmodified	_VTAIKEGSL_					0	0	0		tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	tr|A0A7D6ZXH3|A0A7D6ZXH3_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_13230PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1729614138603	2	459.26875	916.522947	1.5206	0.00069835	-1.939	-0.00089051	-0.41841	-0.00019216	459.2682279893401	54.72	0.28772	56.688	56.583	56.871	1.9684					22	9	3	0	0	0	0.11518	1	22997	22997		7.2892	3.3448	1	5310100			40642	17190	19813	19896	46989	46989					0.06134651694674176
VTALRRQVRP	10	Unmodified	_VTALRRQVRP_					0	0	0		nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A	nc|ENSG00000139116|Q7Z4S6-6|KIF21A	nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2513610720634	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.523	1	43.523	43.023	44.023	0								0	0	0	0.66222	1	18219	18219		0.69767	0	1				40643	2864	19814	19897	46990	46990					0.14134698402403956
VTALRRQVRP	10	Unmodified	_VTALRRQVRP_					0	0	0		nc|ENSG00000139116|Q7Z4S6-6|KIF21A;nc|ENSG00000139116|Q7Z4S6-3|KIF21A;nc|ENSG00000139116|Q7Z4S6-5|KIF21A;nc|ENSG00000139116|Q7Z4S6-2|KIF21A;ENSG00000139116|ENST00000361418|KIF21A;nc|ENSG00000139116|Q7Z4S6-4|KIF21A	nc|ENSG00000139116|Q7Z4S6-6|KIF21A	nc|ENSG00000139116|Q7Z4S6-6|KIF21A	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2521240115166	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.926	1	75.926	75.426	76.426	0								0	0	0	0.66052	1	31605	31605		3.5871	0.5148	1				40644	2864	19814	19897	46991	46991					0.14134698402403956
VTASLARR	8	Unmodified	_VTASLARR_					0	0	0		ENST00000507689.1_3_17:48277445-48277520:-|nuORF	ENST00000507689.1_3_17:48277445-48277520:-|nuORF	ENST00000507689.1_3_17:48277445-48277520:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	437.2685119509697	2	437.266876	872.519199	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.9	1	101.9	101.4	102.4	0								0	0	0	1.0178	1	42676	42676		0.69038	0	1				40645	7012	19815	19898	46992	46992					0.07784026711476599
VTATVTGV	8	Unmodified	_VTATVTGV_					0	0	0		nc|ENSG00000088836|Q8NBS3-4|SLC4A11;nc|ENSG00000088836|Q8NBS3-5|SLC4A11;ENSG00000088836|ENST00000642402|SLC4A11;nc|ENSG00000088836|Q8NBS3-1|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	nc|ENSG00000088836|Q8NBS3-4|SLC4A11	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.3652831912041	2	374.215986	746.417419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.2	1	101.37	100.87	101.87	0.1732								0	0	0	1.0178	1	42582	42582		0.69038	0	1				40646	7835	19816	19899	46993	46993					0.03406735569058128
VTAVPVGG	8	Unmodified	_VTAVPVGG_					0	0	0			REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2057983279228	2	350.205421	698.39629	0.90912	0.00031838	3.4341	0.0012027	4.3433	0.001521	350.20639065085635	32.892	1.1166	33.187	32.466	33.583	0.29431					70	37	2	0	0	0	0.89198	1	13848	13848		0	0	1	2241600	+		40647	14762	19817	19900	46994	46994					0.03502770260206489
VTAVPVGG	8	Unmodified	_VTAVPVGG_					0	0	0			REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2074157595634	2	350.205421	698.39629	0.95636	0.00033492	1.6768	0.00058723	2.6332	0.00092215	350.20567905414083	33.633	0.50525	33.93	33.791	34.296	0.29701					23	16	2	0	0	0	0.89198	1	14116	14116		0	0	1	732040	+		40648	14762	19817	19900	46995	46995					0.03502770260206489
VTAVPVGG	8	Unmodified	_VTAVPVGG_					0	0	0			REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	REV__tr|A0A553SGP2|A0A553SGP2_NIACIN5-carboxyaminoimidazoleribonucleotidemutaseOS=NialliacirculansOX=1397GN=purEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	350.2068664431572	2	350.205421	698.39629	-0.014223	-4.981E-06	3.7311	0.0013066	3.7168	0.0013017	350.2063351153567	26.08	0.4063	27.34	27.204	27.61	1.2594					26	12	3	0	0	0	0.89198	1	10905	10905		0	0	1	748150	+		40649	14762	19817	19900	46996	46996					0.03502770260206489
VTAVRLQRRP	10	Unmodified	_VTAVRLQRRP_					0	0	0			REV__nc|ENSG00000163704|Q5FWE3-3|PRRT3	REV__nc|ENSG00000163704|Q5FWE3-3|PRRT3	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2513000369072	3	399.250918	1194.73092	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.231	1	76.027	75.527	76.527	1.7962								0	0	0	0.66052	1	31141	31141		3.5871	0.95582	1		+		40650	10697	19818	19901	46997	46997					0.14134698402426693
VTAVSLPR	8	Unmodified	_VTAVSLPR_					0	0	0		ENST00000566159.1_1_16:1364579-1364975:+|nuORF	ENST00000566159.1_1_16:1364579-1364975:+|nuORF	ENST00000566159.1_1_16:1364579-1364975:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	421.7591735720634	2	421.758352	841.502152	0.55488	0.00023403	-1.1768	-0.00049631	-0.62188	-0.00026228	421.75760148425576	23.603	0.63559	25.254	24.93	25.566	1.6511					29	20	2	0	0	0	0.71199	1	9864	9864		29.082	0.59474	1	939760			40651	7360	19819	19902	46998	46998					0.07506106105665822
VTCKEEKV	8	Unmodified	_VTCKEEKV_					0	0	0		MSH2|p.T552Pfs*5|1|0.04|ENSG00000095002|chr2:47466801-47466801|A/-|frameshift_variant;MSH2|p.G751Efs*12|1|0.6|ENSG00000095002|chr2:47478311-47478311|G/-|frameshift_variant;nc|ENSG00000095002|P43246-2|MSH2;ENSG00000095002|ENST00000233146|MSH2	MSH2|p.T552Pfs*5|1|0.04|ENSG00000095002|chr2:47466801-47466801|A/-|frameshift_variant	MSH2|p.T552Pfs*5|1|0.04|ENSG00000095002|chr2:47466801-47466801|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2473632693291	2	468.24696	934.479368	2.1968	0.0010287	-1.7731	-0.00083025	0.42373	0.00019841	468.2459267472208	46.642	0.29897	48.612	48.472	48.771	1.9703					15	9	2	0	0	0	0.87276	1	19555	19555		13.508	3.3245	1	748700			40652	1180	19820	19903	46999	46999					0.00950718925878391
VTCRTCPHL	9	Unmodified	_VTCRTCPHL_					0	0	0			REV__ENST00000452841.1_1_13:19467552-19468185:-|nuORF	REV__ENST00000452841.1_1_13:19467552-19468185:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2556640505791	2	515.252054	1028.48956	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.046	1	69.916	69.416	70.416	1.87								0	0	0	0.317	1	28551	28551		16.942	1.0951	1		+		40653	13147	19821	19904	47000	47000					-0.023549966205564488
VTDCDYMA	8	Unmodified	_VTDCDYMA_					0	0	0		ENSG00000179598|ENST00000321560|PLD6	ENSG00000179598|ENST00000321560|PLD6	ENSG00000179598|ENST00000321560|PLD6	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1720764040947	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.316	1	58.73	58.23	59.23	1.4145								0	0	0	1.0178	1	24029	24029		2.5775	0	1				40654	4519	19822	19905	47001	47001					-0.1308575503933298
VTDCDYMA	8	Unmodified	_VTDCDYMA_					0	0	0		ENSG00000179598|ENST00000321560|PLD6	ENSG00000179598|ENST00000321560|PLD6	ENSG00000179598|ENST00000321560|PLD6	MSMS	GG20161007_CRH_Patient100_W632_01	3	459.1721984744072	2	459.172604	916.330655	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.425	1	58.839	58.339	59.339	1.4145								0	0	0	1.0178	1	24075	24075		2.5775	0	1				40655	4519	19822	19905	47002	47002					-0.1308575503933298
VTDETTDSFK	10	Unmodified	_VTDETTDSFK_					0	0	0		nc|ENSG00000111799|Q99715-4|COL12A1;ENSG00000111799|ENST00000322507|COL12A1	nc|ENSG00000111799|Q99715-4|COL12A1	nc|ENSG00000111799|Q99715-4|COL12A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	381.5110656619072	3	381.511909	1141.5139	-0.21275	-8.1165E-05	-3.0934	-0.0011802	-3.3062	-0.0012613	381.5110510199505	3.3756	0.63194	4.1209	3.6303	4.2622	0.74525					63	38	2	0	0	0	0.88031	1	1311	1311		3.5871	0.26742	1	423210			40656	1755	19823	19906	47003	47003					-0.05119786452337394
VTDLLRRWK	9	Unmodified	_VTDLLRRWK_					0	0	0		nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	593.1604492068291	2	593.85639	1185.69823	2.2145	0.0013151	-0.46406	-0.00027559	1.7504	0.0010395	593.8566233061596	64.234	0.15894	64.234	64.174	64.333	0					6	4	2	0	0	0	0.11908	1	26809	26809		2.0598	0	1	328720			40657	7926	19824	19907	47004	47004					0.11280491279558191
VTDLLRRWK	9	Unmodified	_VTDLLRRWK_					0	0	0		nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	593.85639	1185.69823	2.9433	0.0017479	-0.17875	-0.00010615	2.7646	0.0016418	593.8568530678768	62.482	0.27645	63.895	63.711	63.987	1.4134	-0.10202	0.00070927	NaN	2.0598	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1440600			40658	7926	19824	19907							0.11280491279558191
VTDLLRRWK	9	Unmodified	_VTDLLRRWK_					0	0	0		nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	nc|ENSG00000170949|Q9HCG1-2|ZNF160	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	593.85639	1185.69823	2.8399	0.0016865	-1.6983	-0.0010086	1.1416	0.00067795	593.8557513262805	61.905	0.2498	63.862	63.689	63.938	1.9571	-0.13519	-0.0010956	NaN	2.0598	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1294700			40659	7926	19824	19907							0.11280491279558191
VTDPDGMRH	9	Unmodified	_VTDPDGMRH_					0	0	0			REV__ENSG00000146950|ENST00000380913|SHROOM2	REV__ENSG00000146950|ENST00000380913|SHROOM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2366821169853	2	514.234916	1026.45528	1.6268	0.00083655	0.1409	7.2454E-05	1.7677	0.000909	514.2348353166524	69.085	0.4021	70.938	70.766	71.168	1.853					28	12	3	0	0	0	0.37668	1	28984	28984		22.736	16.531	1	1725100	+		40660	10318	19825	19908	47005	47005					-0.05689121507771233
VTDVTLLYGL	10	Unmodified	_VTDVTLLYGL_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|186|3|anti-sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|186|3|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3126708865166	2	547.310615	1092.60668	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.129	1	88.221	87.721	88.721	1.0918								0	0	0	0.65773	1	36747	36747		7.2892	0	1		+		40661	14273	19826	19909	47006	47006					0.06407763071729278
VTEEWFKK	8	Unmodified	_VTEEWFKK_					0	0	0			REV__tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	REV__tr|A0A553SGE2|A0A553SGE2_NIACISigma-70familyRNApolymerasesigmafactorOS=NialliacirculansOX=1397GN=CEQ21_10735PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1906005740166	2	533.782025	1065.5495	1.0687	0.00057044	1.168	0.00062347	2.2367	0.0011939	533.7828278230385	30.4	0.52913	32.215	32.013	32.543	1.8151					18	16	2	0	0	0	2.3239	1	12672	12672		9.3474	0	1	426940	+		40662	14743	19827	19910	47007	47007					0.019343405859899576
VTEGAEPNSV	10	Unmodified	_VTEGAEPNSV_					0	0	0			REV__ENSG00000143536|ENST00000271835|CRNN	REV__ENSG00000143536|ENST00000271835|CRNN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	501.3072387576103	2	501.740554	1001.46655	2.4629	0.0012357	3.5807	0.0017966	6.0436	0.0030323	501.7421558722025	69.859	0.54138	71.696	71.468	72.01	1.8378					17	16	2	0	0	0	0.12471	1	29425	29425		5.7319	0	1	821160	+		40663	10215	19828	19911	47008	47008					-0.03412020932660198
VTEGLGHH	8	Unmodified	_VTEGLGHH_					0	0	0		ENST00000534529.5_1_11:117094698-117095569:-|nuORF	ENST00000534529.5_1_11:117094698-117095569:-|nuORF	ENST00000534529.5_1_11:117094698-117095569:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	425.2164184451103	2	425.214309	848.414065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.037	1	92.018	91.518	92.518	0.98157								0	0	0	1.0178	1	38345	38345		0.79363	0	1				40664	7190	19829	19912	47009	47009					-0.016205144849436692
VTEGRDLIL	9	Unmodified	_VTEGRDLIL_					0	0	0		tr|A0A553SNJ8|A0A553SNJ8_NIACITIRdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24575PE=4SV=1	tr|A0A553SNJ8|A0A553SNJ8_NIACITIRdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24575PE=4SV=1	tr|A0A553SNJ8|A0A553SNJ8_NIACITIRdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_24575PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2949096560478	2	508.292756	1014.57096	2.1624	0.0010991	1.9832	0.0010081	4.1456	0.0021072	508.29396857526814	54.303	0.28286	56.272	56.096	56.379	1.9684					12	8	2	0	0	0	0.22154	1	22754	22754		30.637	0	1	1666000			40665	16424	19830	19913	47010	47010					0.06425725614712974
VTEGSRGGHQ	10	Unmodified	_VTEGSRGGHQ_					0	0	0			REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	REV__ENST00000418132.7_1_17:38296747-38323177:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	514.2489501833916	2	514.249412	1026.48427	1.9406	0.00099794	-2.4732	-0.0012718	-0.53259	-0.00027388	514.2480196265741	66.783	0.41393	66.783	66.608	67.022	0					33	12	4	0	0	0	0.77604	1	27863	27863		14.838	0.25658	1	1681900	+		40666	9253	19831	19914	47011	47011					-0.02791260887147473
VTEHWLGE	8	Unmodified	_VTEHWLGE_					0	0	0			REV__tr|A0A553SN23|A0A553SN23_NIACINUDIXdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23705PE=3SV=1	REV__tr|A0A553SN23|A0A553SN23_NIACINUDIXdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23705PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	485.7362853884697	2	485.735074	969.455596	2.0949	0.0010176	0.12835	6.2344E-05	2.2233	0.0010799	485.7350916210377	34.066	0.33433	34.363	34.177	34.511	0.29701					17	10	2	0	0	0	0.87276	1	14276	14276		13.508	0	1	556560	+		40667	15043	19832	19915	47012	47012					-0.030353785162674285
VTEIISEI	8	Unmodified	_VTEIISEI_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	903.5067016482353	1	903.50334	902.496064	1.933	0.0017465	1.2706	0.001148	3.2036	0.0028945	903.5041121033892	68.433	0.51926	69.811	69.553	70.072	1.3778					50	16	4	0	0	0	0.056627	2	28654	28654;28692		109.63	0	1	34034000			40668	1680	19833	19916	47013;47014	47013					0.040915430834729705
VTEIISEI	8	Unmodified	_VTEIISEI_					0	0	0		ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	ENSG00000109805|ENST00000251496|NCAPG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	903.5056030154228	1	903.50334	902.496064	1.97	0.0017799	0.42994	0.00038845	2.3999	0.0021684	903.5034664187319	67.912	0.52139	69.782	69.489	70.01	1.87					44	16	3	0	0	0	0.056627	2	28432	28432;28521		109.63	0	1	22389000			40669	1680	19833	19916	47015;47016	47015					0.040915430834729705
VTEIMSMGYE	10	Unmodified	_VTEIMSMGYE_					0	0	0		nc|ENSG00000119318|P54727-2|RAD23B;ENSG00000119318|ENST00000358015|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	nc|ENSG00000119318|P54727-2|RAD23B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.1719238162041	3	387.171842	1158.4937	0.68444	0.000265	-1.5331	-0.00059356	-0.84863	-0.00032857	387.17117316815984	70.878	0.36143	72.716	72.503	72.864	1.8378					34	11	4	0	0	0	0.77604	1	29688	29688		12.873	0.63195	1	5761800			40670	2064	19834	19917	47017	47017					-0.07920996708139683
VTEKAYTL	8	Unmodified	_VTEKAYTL_					0	0	0			REV__chr3:101291510-101304146|241|28.63|0.03|9.98|-|0|IMPG2,IMPG2|1	REV__chr3:101291510-101304146|241|28.63|0.03|9.98|-|0|IMPG2,IMPG2|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	462.1464111208916	2	462.755475	923.496398	2.2737	0.0010522	-0.092425	-4.277E-05	2.1813	0.0010094	462.75548827665494	59.241	0.19333	59.241	59.161	59.355	0					6	5	2	0	0	0	2.3239	1	24719	24719		2.3027	0	1	867360	+		40671	8311	19835	19918	47018	47018					0.031589628033202644
VTEPTVYF	8	Unmodified	_VTEPTVYF_					0	0	0			REV__CON__Q9N2I2	REV__CON__Q9N2I2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	478.3020812869072	2	478.242201	954.469849	2.8873	0.0013808	-0.9553	-0.00045687	1.932	0.00092398	478.24145320787346	59.657	0.32809	61.626	61.435	61.763	1.969					16	10	2	0	0	0	2.3239	1	25070	25070		5.2307	0	1	1775800	+	+	40672	8401	19836	19919	47019	47019					-0.009207260879975365
VTEQVLKIPV	10	Unmodified	_VTEQVLKIPV_					0	0	0		ENSG00000235711|ENST00000421388|ANKRD34C	ENSG00000235711|ENST00000421388|ANKRD34C	ENSG00000235711|ENST00000421388|ANKRD34C	MSMS	GG20161007_CRH_Patient100_A02_02	2	563.3489257693291	2	563.347532	1124.68051	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.003	1	62.332	61.832	62.832	0.32974								0	0	0	0.66176	1	25978	25978		1.4819	0	1				40673	5317	19837	19920	47020	47020					0.12315731234025407
VTETQQFLL	9	Unmodified	_VTETQQFLL_					0	0	0			REV__ENST00000550479.1_1_12:104332030-104335334:+|nuORF	REV__ENST00000550479.1_1_12:104332030-104335334:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.7931396365166	2	539.792589	1077.57063	1.9438	0.0010493	0.36097	0.00019485	2.3048	0.0012441	539.792786264258	64.635	0.73092	64.962	64.689	65.42	0.32689					63	22	5	0	0	0	0.5697	1	27158	27158		12.532	0	1	39083000	+		40674	13826	19838	19921	47021	47021					0.03494305894855643
VTFCRLFL	8	Unmodified	_VTFCRLFL_					0	0	0			REV__ENST00000565280.5_1_15:31198658-31229456:+|nuORF	REV__ENST00000565280.5_1_15:31198658-31229456:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.7796508669853	2	499.778231	997.541908	1.1262	0.00056283	2.4516	0.0012253	3.5778	0.0017881	499.7793727546139	69.052	0.45917	70.905	70.709	71.168	1.853					25	14	2	0	0	0	0.5808	1	28998	28998		42.095	0	1	2080900	+		40675	11725	19839	19922	47022	47022					0.04303909784709958
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415283083916	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.4742	1	1.6213	1.1213	2.1213	0.14703								0	0	0	1.0178	1	608	608		0.45834	0	1				40676	4840	19840	19923	47023	47023					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1412231326103	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.977	1	2.1114	1.6114	2.6114	0.1344								0	0	0	1.0178	1	813	813		0.45834	0	1				40677	4840	19840	19923	47024	47024					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1414672732353	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.0836	1	3.2062	2.7062	3.7062	0.12256								0	0	0	1.0178	1	1273	1273		0.45834	0	1				40678	4840	19840	19923	47025	47025					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1412841677666	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.9077	1	4.0097	3.5097	4.5097	0.10199								0	0	0	1.0178	1	1613	1613		0.45834	0	1				40679	4840	19840	19923	47026	47026					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1419555544853	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.783	1	2.4363	1.9363	2.9363	0.65331								0	0	0	1.0178	1	731	731		0.45834	0	1				40680	4840	19840	19923	47027	47027					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415588259697	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4811	1	3.1153	2.6153	3.6153	0.63417								0	0	0	1.0178	1	1021	1021		0.45834	0	1				40681	4840	19840	19923	47028	47028					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1415283083916	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.304	1	3.9277	3.4277	4.4277	0.62362								0	0	0	1.0178	1	1364	1364		0.45834	0	1				40682	4840	19840	19923	47029	47029					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417114138603	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3984	1	4.0221	3.5221	4.5221	0.62362								0	0	0	1.0178	1	1403	1403		0.45834	0	1				40683	4840	19840	19923	47030	47030					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1412231326103	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9653	1	5.5866	5.0866	6.0866	0.62127								0	0	0	1.0178	1	2049	2049		0.45834	0	1				40684	4840	19840	19923	47031	47031					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411010622978	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4724	1	7.0937	6.5937	7.5937	0.62127								0	0	0	1.0178	1	2674	2674		0.45834	0	1				40685	4840	19840	19923	47032	47032					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1411010622978	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9708	1	7.598	7.098	8.098	0.62713								0	0	0	1.0178	1	2882	2882		0.45834	0	1				40686	4840	19840	19923	47033	47033					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413757205009	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7267	1	8.3538	7.8538	8.8538	0.62713								0	0	0	1.0178	1	3198	3198		0.45834	0	1				40687	4840	19840	19923	47034	47034					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1413757205009	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9553	1	8.5883	8.0883	9.0883	0.63307								0	0	0	1.0178	1	3294	3294		0.45834	0	1				40688	4840	19840	19923	47035	47035					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1417724490166	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.1682	1	8.8047	8.3047	9.3047	0.63651								0	0	0	1.0178	1	3384	3384		0.45834	0	1				40689	4840	19840	19923	47036	47036					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412536501884	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5818	1	2.3302	1.8302	2.8302	0.7484								0	0	0	1.0178	1	655	655		0.45834	0	1				40690	4840	19840	19923	47037	47037					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414977908134	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3082	1	4.0535	3.5535	4.5535	0.74525								0	0	0	1.0178	1	1372	1372		0.45834	0	1				40691	4840	19840	19923	47038	47038					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413757205009	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3969	1	4.1421	3.6421	4.6421	0.74525								0	0	0	1.0178	1	1409	1409		0.45834	0	1				40692	4840	19840	19923	47039	47039					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416808962822	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.905	1	4.6502	4.1502	5.1502	0.74525								0	0	0	1.0178	1	1619	1619		0.45834	0	1				40693	4840	19840	19923	47040	47040					-0.049046241656583334
VTFDLGFC	8	Unmodified	_VTFDLGFC_					0	0	0		nc|ENSG00000187790|Q8IYD8-3|FANCM;ENSG00000187790|ENST00000267430|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	nc|ENSG00000187790|Q8IYD8-3|FANCM	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414977908134	3	301.142323	900.40514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4488	1	5.1852	4.6852	5.6852	0.73642								0	0	0	1.0178	1	1842	1842		0.45834	0	1				40694	4840	19840	19923	47041	47041					-0.049046241656583334
VTFIGKAI	8	Unmodified	_VTFIGKAI_					0	0	0		ENST00000548349.1_1_12:75994629-75994812:+|nuORF	ENST00000548349.1_1_12:75994629-75994812:+|nuORF	ENST00000548349.1_1_12:75994629-75994812:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	424.7656738162041	2	424.765646	847.516739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.38	1	57.703	57.203	58.203	0.32241								0	0	0	1.0178	1	24061	24061		14.582	0	1				40695	7249	19841	19924	47042	47042					0.08688178253783008
VTFKDVSVDF	10	Unmodified	_VTFKDVSVDF_					0	0	0		nc|ENSG00000184939|Q8TF47-3|ZFP90;ENSG00000184939|ENST00000563169|ZFP90	nc|ENSG00000184939|Q8TF47-3|ZFP90	nc|ENSG00000184939|Q8TF47-3|ZFP90	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	578.3078491091728	2	578.797872	1155.58119	2.9991	0.0017358	-1.7389	-0.0010065	1.2602	0.00072939	579.2987915362198	64.361	0.18413	65.768	65.71	65.894	1.4071					7	5	2	0	0	0	0.12461	1	26976	26976		3.2813	0	1	1928000			40696	4719	19842	19925	47043	47043					0.009622885492717614
VTFLGIPV	8	Unmodified	_VTFLGIPV_					0	0	0		tr|A0A553SLP0|A0A553SLP0_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_21015PE=4SV=1	tr|A0A553SLP0|A0A553SLP0_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_21015PE=4SV=1	tr|A0A553SLP0|A0A553SLP0_NIACIPTSbeta-glucosidetransportersubunitIIABCOS=NialliacirculansOX=1397GN=CEQ21_21015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	423.2598449587822	2	423.260197	844.50584	2.9784	0.0012606	-1.4334	-0.00060668	1.5451	0.00065396	423.2597511869629	93.549	0.32275	93.694	93.524	93.847	0.14493					16	9	2	0	0	0	0.88958	1	39148	39148		2.8892	0	1	822770			40697	16344	19843	19926	47044	47044					0.07736775879504876
VTFLMLAVSL	10	Unmodified	_VTFLMLAVSL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3203613162041	2	547.319928	1092.6253	2.3799	0.0013026	-3.2946	-0.0018032	-0.91468	-0.00050062	547.3187841390777	80.406	0.43222	81.658	81.417	81.85	1.2512					29	13	3	0	0	0	0.12991	2	33730	33730;33784		58.679	9.1245	1	1479700			40698	1354	19844	19927	47045;47046	47045					0.0826960144190707
VTFLMLAVSL	10	Unmodified	_VTFLMLAVSL_					0	0	0		nc|ENSG00000101474|Q9HDC9-2|APMAP;ENSG00000101474|ENST00000217456|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	547.319928	1092.6253	1.7766	0.00097237	-4.0111	-0.0021954	-2.2345	-0.001223	547.317624149477	82.024	0.33591	82.024	81.763	82.099	0	0.25481	-0.00074853	NaN	58.679	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	907960			40699	1354	19844	19927							0.0826960144190707
VTFLTVTPN	9	Unmodified	_VTFLTVTPN_					0	0	0		nc|ENSG00000160323|Q76LX8-3|ADAMTS13;ENSG00000160323|ENST00000355699|ADAMTS13;nc|ENSG00000160323|Q76LX8|ADAMTS13;nc|ENSG00000160323|Q76LX8-4|ADAMTS13	nc|ENSG00000160323|Q76LX8-3|ADAMTS13	nc|ENSG00000160323|Q76LX8-3|ADAMTS13	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2780334353447	2	496.276575	990.538597	0.25207	0.0001251	3.2801	0.0016279	3.5322	0.001753	496.2784872939676	13.963	0.70735	13.963	13.579	14.286	0					38	22	3	0	0	0	0.37774	1	5796	5796		21.537	6.6987	1	1402700			40700	3555	19845	19928	47047	47047					0.04294938211705812
VTFLVWKV	8	Unmodified	_VTFLVWKV_					0	0	0			REV__tr|A0A553SFB4|A0A553SFB4_NIACIThioredoxin-likefolddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08650PE=4SV=1	REV__tr|A0A553SFB4|A0A553SFB4_NIACIThioredoxin-likefolddomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08650PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.3067504763603	2	496.302396	990.590239	2.6262	0.0013034	3.4684	0.0017214	6.0946	0.0030248	496.30454655183854	63.388	0.91933	64.801	64.075	64.994	1.4134					42	29	3	0	0	0	0.88504	1	26453	26453		5.7604	0	1	1461200	+		40701	14701	19846	19929	47048	47048					0.09456726696271289
VTFNRNKL	8	Unmodified	_VTFNRNKL_					0	0	0			REV__VCL-ADK|2|fusion	REV__VCL-ADK|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.2884094119072	2	496.287808	990.561064	2.878	0.0014283	-2.1563	-0.0010702	0.72162	0.00035813	496.2867309574078	76.355	0.33797	76.677	76.484	76.822	0.32163					23	10	3	0	0	0	0.87276	1	31987	31987		13.508	1.8676	1	2777500	+		40702	8581	19847	19930	47049	47049					0.06540582399975392
VTGAYIKPTLS	11	Unmodified	_VTGAYIKPTLS_					0	0	0		nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;nc|ENSG00000104972|Q8NHL6-5|LILRB1;ENST00000473156.5_1_19:55105185-55107230:+|nuORF;nc|ENSG00000104974|O75019-2|LILRA1;ENST00000495417.5_1_19:55105185-55110756:+|nuORF;ENSG00000104974|ENST00000251372|LILRA1	nc|ENSG00000104972|Q8NHL6|LILRB1	nc|ENSG00000104972|Q8NHL6|LILRB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.3287841677666	2	575.329339	1148.64412	1.819	0.0010465	0.59098	0.00034001	2.41	0.0013865	575.8311012243071	66.092	0.19007	66.417	66.305	66.495	0.32449					9	5	2	0	0	0	0.93654	1	27669	27669		7.609	0	1	452150			40703	1493	19848	19931	47050	47050					0.07574854337326542
VTGELCTTSY	10	Unmodified	_VTGELCTTSY_					0	0	0			REV__ENSG00000075673|ENST00000381946|ATP12A	REV__ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.2469360232353	2	537.244615	1072.47468	2.4738	0.0013291	1.7029	0.00091487	4.1767	0.0022439	537.2452781361908	75.618	0.43423	75.939	75.678	76.112	0.32163					59	13	6	0	0	0	0.85604	1	31670	31670		6.2058	0.97511	1	10883000	+		40704	8766	19849	19932	47051	47051					-0.058662100075252965
VTGKVVKFLNF	11	Unmodified	_VTGKVVKFLNF_					0	0	0		tr|A0A7D6VND8|A0A7D6VND8_9CLOT30SribosomalproteinS1OS=ClostridiumintestinaleOX=36845GN=rpsAPE=4SV=1	tr|A0A7D6VND8|A0A7D6VND8_9CLOT30SribosomalproteinS1OS=ClostridiumintestinaleOX=36845GN=rpsAPE=4SV=1	tr|A0A7D6VND8|A0A7D6VND8_9CLOT30SribosomalproteinS1OS=ClostridiumintestinaleOX=36845GN=rpsAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9213439822197	3	417.920174	1250.73869	0.82471	0.00034466	0.87136	0.00036416	1.6961	0.00070882	417.9203457843145	28.894	0.45672	30.176	29.855	30.312	1.2825					48	14	4	0	0	0	1.0174	1	12035	12035		1.1098	0	1	7286900			40705	16730	19850	19933	47052	47052					0.12335412879338037
VTGLGPRR	8	Unmodified	_VTGLGPRR_					0	0	0			REV__ENSG00000134698|ENST00000373210|AGO4	REV__ENSG00000134698|ENST00000373210|AGO4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	428.2622863650322	2	428.261594	854.508634	2.6907	0.0011523	1.0039	0.00042995	3.6946	0.0015823	428.2619177183056	72.037	0.89125	73.861	73.507	74.399	1.824					78	28	5	0	0	0	0.89051	1	30121	30121		2.3027	0	1	144060000	+		40706	9913	19851	19934	47053	47053					0.0755604405703707
VTGLGPRRPPQ	11	Unmodified	_VTGLGPRRPPQ_					0	0	0			REV__ENSG00000134698|ENST00000373210|AGO4	REV__ENSG00000134698|ENST00000373210|AGO4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3446533083916	2	589.343646	1176.67274	1.9498	0.0011491	-0.65915	-0.00038846	1.2907	0.00076065	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	1.0366	1	32452	32452		1.1933	0.59184	1	8239500	+		40707	9913	19852	19935	47054	47054					0.09147016757151505
VTGLQQLTL	9	Unmodified	_VTGLQQLTL_					0	0	0			REV__ENSG00000065060|ENST00000192788|BLTP3A	REV__ENSG00000065060|ENST00000192788|BLTP3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.7903320193291	2	486.78985	971.565146	0.75347	0.00036678	0.42678	0.00020775	1.1802	0.00057453	486.7898689909281	56.417	0.44864	57.832	57.584	58.033	1.4145					28	14	3	0	0	0	0.5697	1	23689	23689		12.532	0	1	8747900	+		40708	8669	19853	19936	47055	47055					0.07822627103041668
VTGLTVSK	8	Unmodified	_VTGLTVSK_					0	0	0			REV__ENSG00000102043|ENST00000374852|MTMR8	REV__ENSG00000102043|ENST00000374852|MTMR8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	804.4904662966728	1	804.482545	803.475269	2.9164	0.0023462	3.8411	0.0030901	6.7575	0.0054363	804.4862755277861	101.06	0.3781	101.27	101.07	101.45	0.20527					15	12	2	0	0	0	0.87935	1	42464	42464		9.3474	0	1	10209000	+		40709	9058	19854	19937	47056	47056					0.0656699749447398
VTGLVGGQER	10	Unmodified	_VTGLVGGQER_					0	0	0		ENST00000568500.1_1_16:30709907-30710114:-|nuORF	ENST00000568500.1_1_16:30709907-30710114:-|nuORF	ENST00000568500.1_1_16:30709907-30710114:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	508.2786437869072	2	508.28018	1014.54581	1.9714	0.001002	-1.0843	-0.00055111	0.88714	0.00045091	508.2793766333058	83.293	0.4106	84.931	84.726	85.136	1.6379					23	12	3	0	0	0	0.44465	1	34974	34974		30.637	3.7529	1	2345400			40710	7373	19855	19938	47057	47057					0.039116708121468946
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7803222537041	2	434.778754	867.542954	0.94576	0.0004112	3.0328	0.0013186	3.9786	0.0017298	434.78002743725807	19.269	0.85229	19.462	19.108	19.96	0.19342					60	27	3	0	0	0	0.83213	1	8031	8031		2.0598	0	1	6100900			40711	3010	19856	19939	47058	47058					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	434.7808715701103	2	434.778754	867.542954	1.3199	0.00057385	3.391	0.0014743	4.7109	0.0020482	434.78029569288907	26.076	0.96563	26.337	25.93	26.896	0.26173					59	31	2	0	0	0	0.83213	1	10963	10963		2.0598	0	1	2804000			40712	3010	19856	19939	47059	47059					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7808715701103	2	434.778754	867.542954	1.3726	0.00059676	2.9465	0.0012811	4.3191	0.0018779	434.7800656124557	22.995	0.85819	24.21	23.799	24.657	1.2145					61	27	3	0	0	0	0.83213	1	9591	9591		2.0598	0	1	2997600			40713	3010	19856	19939	47060	47060					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	434.7804443240166	2	434.778754	867.542954	1.5376	0.0006685	2.7817	0.0012094	4.3193	0.0018779	434.7801373344185	24.716	1.1447	25.957	25.578	26.723	1.241					71	37	3	0	0	0	0.83213	2	10345	10345;10436		2.0598	0	1	3710200			40714	3010	19856	19939	47061;47062	47061					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7805663943291	2	434.778754	867.542954	0.59079	0.00025686	3.1042	0.0013496	3.695	0.0016065	434.78008073899537	22.565	0.91559	24.217	23.645	24.56	1.6511					65	29	3	0	0	0	0.83213	1	9461	9461		2.0598	0	1	2295200			40715	3010	19856	19939	47063	47063					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7801696658134	2	434.778754	867.542954	0.67204	0.00029219	2.9356	0.0012764	3.6077	0.0015685	434.78023561423674	24.448	1.124	26.133	25.662	26.786	1.6845					79	37	3	0	0	0	0.76456	1	10203	10203		4.756	0	1	3403500			40716	3010	19856	19939	47064	47064					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7815429568291	2	434.778754	867.542954	0.73868	0.00032116	2.9423	0.0012793	3.681	0.0016004	434.7800568225069	26.099	0.69436	27.816	27.584	28.278	1.7167					48	22	3	0	0	0	0.83213	2	10940	10940;11061		2.0598	0	1	2033000			40717	3010	19856	19939	47065;47066	47065					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	434.8824035525322	2	434.778754	867.542954	0.52078	0.00022642	2.3623	0.0010271	2.883	0.0012535	434.7800145813911	20.78	0.68426	22.355	21.997	22.681	1.5748					47	22	3	0	0	0	0.11908	1	8511	8511		2.0598	0	1	3284500			40718	3010	19856	19939	47067	47067					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	435.2102538943291	2	434.778754	867.542954	0.8809	0.000383	3.6875	0.0016033	4.5684	0.0019862	434.78028688574307	29.735	0.76332	31.534	31.112	31.875	1.7987					33	24	2	0	0	0	0.11908	1	12368	12368		2.0598	0	1	1351900			40719	3010	19856	19939	47068	47068					0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	434.778754	867.542954	0.61755	0.0002685	5.548	0.0024122	6.1656	0.0026807	434.78101669669394	27.584	0.57419	27.584	27.2	27.775	0	-0.11576	0.001345	NaN	2.0598	33	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	712850			40720	3010	19856	19939							0.10388447425293634
VTGPVLAVI	9	Unmodified	_VTGPVLAVI_					0	0	0		nc|ENSG00000142949|P10586-2|PTPRF;ENSG00000142949|ENST00000359947|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	nc|ENSG00000142949|P10586-2|PTPRF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	434.778754	867.542954	1.1132	0.00048401	2.131	0.0009265	3.2442	0.0014105	434.7797830887938	22.286	0.73875	22.509	22.173	22.912	0.223	0.098618	0.00012803	NaN	2.0598	48	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4334400			40721	3010	19856	19939							0.10388447425293634
VTGTSIRRL	9	Unmodified	_VTGTSIRRL_					0	0	0		nc|ENSG00000135436|Q8IYM0-2|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;ENSG00000135436|ENST00000257894|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	502.3405639529228	2	501.806365	1001.59818	4.2584	0.0021369	-1.2105	-0.00060744	3.0479	0.0015294	501.8071818000259	92.528	0.16391	93.464	93.375	93.539	0.93623					5	4	2	0	0	0	0.11812	1	38979	38979		4.756	0	1	108710			40722	2664	19857	19940	47069	47069					0.09744253945746095
VTGTSIRRL	9	Unmodified	_VTGTSIRRL_					0	0	0		nc|ENSG00000135436|Q8IYM0-2|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;ENSG00000135436|ENST00000257894|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	501.806365	1001.59818	1.8725	0.00093966	-1.1983	-0.00060129	0.67429	0.00033836	501.80639570579507	93.38	0.35054	93.38	93.169	93.52	0	-0.031821	0.00042272	NaN	4.756	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	614710			40723	2664	19857	19940							0.09744253945746095
VTGTSIRRL	9	Unmodified	_VTGTSIRRL_					0	0	0		nc|ENSG00000135436|Q8IYM0-2|FAM186B;ENST00000533372.1_1_12:49976813-49999059:-|nuORF;ENSG00000135436|ENST00000257894|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	nc|ENSG00000135436|Q8IYM0-2|FAM186B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	501.806365	1001.59818	3.2064	0.001609	-2.1764	-0.0010921	1.03	0.00051685	501.80634667286677	93.223	0.35696	93.391	93.19	93.547	0.16835	-0.020653	-0.00055896	NaN	4.756	18	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	381970			40724	2664	19857	19940							0.09744253945746095
VTGVLFKPSL	10	Unmodified	_VTGVLFKPSL_					0	0	0			REV__ENSG00000076321|ENST00000209884|KLHL20	REV__ENSG00000076321|ENST00000209884|KLHL20	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.2660400271416	2	530.823692	1059.63283	2.4895	0.0013215	2.1458	0.0011391	4.6353	0.0024605	530.8266740325182	44.218	0.25002	46.162	46.021	46.271	1.9438					10	7	2	0	0	0	0.12471	1	18553	18553		5.7319	0	1	1069600	+		40725	8769	19858	19941	47070	47070					0.10540077033851958
VTGWKRPRGRP	11	Unmodified	_VTGWKRPRGRP_					0	0	0			REV__HMGA2-ZNF569|1|fusion	REV__HMGA2-ZNF569|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2569457888603	3	437.258184	1308.75272	2.7867	0.0012185	-2.9081	-0.0012716	-0.12137	-5.3072E-05	437.25661761529017	83.584	1.1665	83.855	83.091	84.257	0.27029					77	37	3	0	0	0	1.039	1	34795	34795		0.45452	0	1	1929400	+		40726	14223	19859	19942	47071	47071					0.11069503150952187
VTGYLKVTI	9	Unmodified	_VTGYLKVTI_					0	0	0		ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	ENSG00000249715|ENST00000624922|FER1L5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.3048583865166	2	497.302593	992.590633	2.6478	0.0013168	0.34318	0.00017067	2.991	0.0014874	497.3031046814202	75.598	0.29438	77.38	77.258	77.552	1.7817					18	9	3	0	0	0	0.10993	1	31715	31715		46.021	0.32134	1	2285800			40727	5376	19860	19943	47072	47072					0.09404101625477779
VTHILKSNS	9	Unmodified	_VTHILKSNS_					0	0	0		ENSG00000166670|ENST00000279441|MMP10	ENSG00000166670|ENST00000279441|MMP10	ENSG00000166670|ENST00000279441|MMP10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.7854797244072	2	499.785099	997.555644	2.2436	0.0011213	0.70884	0.00035427	2.9525	0.0014756	499.7852436024002	84.259	0.40376	84.259	84.058	84.461	0					23	12	2	0	0	0	0.77526	2	35095	35095;35149		4.3292	0	1	1076900			40728	3915	19861	19944	47073;47074	47073					0.05676858817525954
VTHKQSLEDML	11	Unmodified	_VTHKQSLEDML_					0	0	0		ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	650.8395873904228	2	650.83192	1299.64929	3.8764	0.0025229	2.8533	0.001857	6.7297	0.0043799	650.8347715706324	92.477	0.62116	93.413	93.114	93.735	0.93624					43	18	4	0	0	0	0.6971	2	38900	38900;38994		18.373	5.3306	1	1836300			40729	4392	19862	19945	47075;47076	47075					0.011447901376413938
VTHKQSLEDML	11	Unmodified	_VTHKQSLEDML_					0	0	0		ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	ENSG00000176022|ENST00000379198|B3GALT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	650.8390991091728	2	650.83192	1299.64929	3.3251	0.0021641	3.1125	0.0020257	6.4376	0.0041898	650.8341879497586	92.009	0.51438	93.336	93.054	93.568	1.3269					32	15	3	0	0	0	0.83687	1	38809	38809		13.615	1.0833	1	1270600			40730	4392	19862	19945	47077	47077					0.011447901376413938
VTHLPVGVTV	10	Unmodified	_VTHLPVGVTV_					0	0	0		nc|ENSG00000072195|Q15772-1|SPEG;ENSG00000072195|ENST00000312358|SPEG	nc|ENSG00000072195|Q15772-1|SPEG	nc|ENSG00000072195|Q15772-1|SPEG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	511.3073608279228	2	511.305667	1020.59678	2.1404	0.0010944	0.91853	0.00046965	3.0589	0.001564	511.3061952616975	54.625	0.34225	54.625	54.448	54.79	0					22	10	3	0	0	0	0.44465	1	22788	22788		30.637	0	1	1587100			40731	879	19863	19946	47078	47078					0.08730619857010424
VTIATEEIP	9	Unmodified	_VTIATEEIP_					0	0	0			REV__ENST00000296802.9_1_5:74072492-74072618:+|nuORF	REV__ENST00000296802.9_1_5:74072492-74072618:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	486.7668334841728	2	486.76604	971.517527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.405	1	58.374	57.874	58.874	1.9684								0	0	0	0.26021	1	23656	23656		21.747	2.3076	1		+		40732	12298	19864	19947	47079	47079					0.030629281121719032
VTICKFTL	8	Unmodified	_VTICKFTL_					0	0	0			REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|30|1|anti-sense	REV__MER49_dup1305|chr21:41210187-41211078:+|1.3236421071491895|0.4412608656295442|1.58|428.0|30|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	462.7637817263603	2	462.764789	923.515025	2.4704	0.0011432	-3.4025	-0.0015746	-0.93209	-0.00043134	462.7629098500902	47.239	0.41529	48.621	48.41	48.825	1.3825					32	12	3	0	0	0	0.49046	1	19758	19758		48.346	0	1	4534100	+		40733	14357	19865	19948	47080	47080					0.05020801173554901
VTIDFVLWS	9	Unmodified	_VTIDFVLWS_					0	0	0			REV__BMP5|p.G246S|1|0.43|ENSG00000112175|chr6:55794375-55794375|C/T|missense_variant	REV__BMP5|p.G246S|1|0.43|ENSG00000112175|chr6:55794375-55794375|C/T|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	540.2922241091728	2	540.292225	1078.5699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.114	1	66.438	65.938	66.938	0.32449								0	0	0	0.33839	1	27679	27679		14.838	3.198	1		+		40734	8167	19866	19949	47081	47081					0.03375511245803864
VTIDKLIQ	8	Unmodified	_VTIDKLIQ_					0	0	0			REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2882568240166	2	465.286943	928.559333	2.5956	0.0012077	-0.47016	-0.00021876	2.1254	0.00098892	465.28681104270163	64.662	1.0186	64.989	64.689	65.707	0.32689					88	31	5	0	0	0	0.35609	1	27012	27012		63.961	0	1	86604000	+		40735	9248	19867	19950	47082	47082					0.09219528591370363
VTIDKLIQ	8	Unmodified	_VTIDKLIQ_					0	0	0			REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	REV__ENST00000596710.1_1_19:21934351-21934702:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	929.5671264529228	1	929.566609	928.559333	2.4762	0.0023018	-1.0687	-0.00099347	1.4075	0.0013083	929.5643808234967	62.915	0.27493	64.86	64.752	65.027	1.9444					12	8	2	0	0	0	0.38824	1	26424	26424		56.177	0	1	1352000	+		40736	9248	19867	19950	47083	47083					0.09219528591370363
VTIEDIIEEVM	11	Unmodified	_VTIEDIIEEVM_					0	0	0		tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8890258669853	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.13	1	115.17	114.67	115.67	0.042839								0	0	0	0.63775	1	49538	49538		0	0	1				40737	17183	19868	19951	47084	47084					0.009234324663793814
VTIEDIIEEVM	11	Unmodified	_VTIEDIIEEVM_					0	0	0		tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	tr|A0A7D6ZX23|A0A7D6ZX23_9CLOTHlyC/CorCfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_20430PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8891479372978	3	430.8881	1289.64247	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.33	1	115.37	114.87	115.87	0.041786								0	0	0	0.63775	1	49618	49618		0	0	1				40738	17183	19868	19951	47085	47085					0.009234324663793814
VTIGEEKKI	9	Unmodified	_VTIGEEKKI_					0	0	0		nc|ENSG00000150625|P51674-3|GPM6A;nc|ENSG00000150625|P51674-2|GPM6A;ENSG00000150625|ENST00000393658|GPM6A;ENST00000507080.5_1_4:176556058-176562011:-|nuORF	nc|ENSG00000150625|P51674-3|GPM6A	nc|ENSG00000150625|P51674-3|GPM6A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	508.8044006228447	2	508.802957	1015.59136	2.2561	0.0011479	-2.0057	-0.0010205	0.25038	0.00012739	508.8030067737048	49.858	0.30008	49.858	49.691	49.991	0					15	9	2	0	0	0	0.35391	1	20790	20790		22.736	1.1993	1	890010			40739	3268	19869	19952	47086	47086					0.08418896274520193
VTIGLVKEL	9	Unmodified	_VTIGLVKEL_					0	0	0			REV__nc|ENSG00000137802|O60336-5|MAPKBP1	REV__nc|ENSG00000137802|O60336-5|MAPKBP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.3111450076103	2	486.310418	970.606283	3.3783	0.0016429	-2.9784	-0.0014484	0.3999	0.00019448	486.3087499494189	90.381	0.27282	90.59	90.372	90.645	0.20904					13	8	2	0	0	0	0.46905	1	37848	37848		16.942	0	1	1173400	+		40740	10029	19870	19953	47087	47087					0.11980388142512766
VTIGLVKEL	9	Unmodified	_VTIGLVKEL_					0	0	0			REV__nc|ENSG00000137802|O60336-5|MAPKBP1	REV__nc|ENSG00000137802|O60336-5|MAPKBP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.3125488162041	2	486.310418	970.606283	4.6518	0.0022622	-0.28351	-0.00013787	4.3683	0.0021244	486.3102036793753	89.099	0.41228	90.504	90.264	90.677	1.4045					21	12	2	0	0	0	0.46905	1	37506	37506		16.942	0	1	2779800	+		40741	10029	19870	19953	47088	47088					0.11980388142512766
VTIIDINKL	9	Unmodified	_VTIIDINKL_					0	0	0		tr|A0A7D6ZFZ2|A0A7D6ZFZ2_9CLOTChemotaxisproteinCheWOS=ClostridiumintestinaleOX=36845GN=HZF06_17045PE=4SV=1	tr|A0A7D6ZFZ2|A0A7D6ZFZ2_9CLOTChemotaxisproteinCheWOS=ClostridiumintestinaleOX=36845GN=HZF06_17045PE=4SV=1	tr|A0A7D6ZFZ2|A0A7D6ZFZ2_9CLOTChemotaxisproteinCheWOS=ClostridiumintestinaleOX=36845GN=HZF06_17045PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.8241454958916	2	514.82115	1027.62775	1.9649	0.0010116	0.9141	0.0004706	2.879	0.0014822	514.8217326997595	42.69	0.81223	44.03	43.764	44.576	1.3399					96	25	6	0	0	0	0.49082	1	18100	18100		15.847	0	1	176560000			40742	17067	19871	19954	47089	47089					0.11503773171239118
VTIILKIGI	9	Unmodified	_VTIILKIGI_					0	0	0			REV__tr|A0A553SKB7|A0A553SKB7_NIACISingle-stranded-DNA-specificexonucleaseRecJOS=NialliacirculansOX=1397GN=recJPE=3SV=1	REV__tr|A0A553SKB7|A0A553SKB7_NIACISingle-stranded-DNA-specificexonucleaseRecJOS=NialliacirculansOX=1397GN=recJPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.3397094607353	2	485.338978	968.663404	2.694	0.0013075	0.18996	9.2196E-05	2.8839	0.0013997	485.33908890815127	76.25	0.44368	78.017	77.845	78.288	1.7672					31	13	3	0	0	0	0.15635	1	32079	32079		37.974	0	1	3743000	+		40743	14946	19872	19955	47090	47090					0.1778185541890025
VTIILPLALMR	11	Unmodified	_VTIILPLALMR_					0	0	0		ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000188338|ENST00000614032|SLC38A3	ENSG00000188338|ENST00000614032|SLC38A3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.2190429568291	4	310.701889	1238.77845	0.10692	3.3222E-05	-0.36668	-0.00011393	-0.25976	-8.0707E-05	310.7016959793532	29.532	0.94147	31.331	30.627	31.568	1.7987					55	30	2	0	0	0	0.14606	1	12331	12331		0	0	1	1332600			40744	4857	19873	19956	47091	47091					0.16861216558345404
VTILAYYR	8	Unmodified	_VTILAYYR_					0	0	0		ENST00000479501.5_1_20:61943331-61950713:+|nuORF;ENSG00000101203|ENST00000358894|COL20A1;nc|ENSG00000101203|Q9P218-2|COL20A1;nc|ENSG00000101203|Q9P218-3|COL20A1	ENST00000479501.5_1_20:61943331-61950713:+|nuORF	ENST00000479501.5_1_20:61943331-61950713:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7896301150322	2	499.78711	997.559667	4.4079	0.002203	2.1433	0.0010712	6.5512	0.0032742	499.78763438046616	87.321	0.37054	88.413	88.241	88.612	1.0918					23	11	3	0	0	0	0.87276	1	36821	36821		13.508	0.97634	1	2836800			40745	1330	19874	19957	47092	47092					0.06078948311221666
VTILAYYR	8	Unmodified	_VTILAYYR_					0	0	0		ENST00000479501.5_1_20:61943331-61950713:+|nuORF;ENSG00000101203|ENST00000358894|COL20A1;nc|ENSG00000101203|Q9P218-2|COL20A1;nc|ENSG00000101203|Q9P218-3|COL20A1	ENST00000479501.5_1_20:61943331-61950713:+|nuORF	ENST00000479501.5_1_20:61943331-61950713:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	499.78711	997.559667	4.3462	0.0021722	1.1123	0.00055591	5.4585	0.0027281	499.78752492147305	86.816	0.12161	88.312	88.21	88.332	1.4953	-0.050464	-0.00071324	NaN	13.508	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1225800			40746	1330	19874	19957							0.06078948311221666
VTIPAYSII	9	Unmodified	_VTIPAYSII_					0	0	0		tr|A0A553SJQ3|A0A553SJQ3_NIACI1,4-alpha-glucanbranchingenzymeGlgBOS=NialliacirculansOX=1397GN=glgBPE=3SV=1	tr|A0A553SJQ3|A0A553SJQ3_NIACI1,4-alpha-glucanbranchingenzymeGlgBOS=NialliacirculansOX=1397GN=glgBPE=3SV=1	tr|A0A553SJQ3|A0A553SJQ3_NIACI1,4-alpha-glucanbranchingenzymeGlgBOS=NialliacirculansOX=1397GN=glgBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7888061404228	2	488.789318	975.564084	4.7316	0.0023128	-3.1682	-0.0015486	1.5634	0.00076417	488.78768258271816	89.099	0.4434	90.504	90.233	90.677	1.4045					33	13	3	0	0	0	0.27148	1	37591	37591		26.884	5.137	1	3332200			40747	16258	19875	19958	47093	47093					0.075324127341446
VTIQLAQKV	9	Unmodified	_VTIQLAQKV_					0	0	0		ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3127929568291	2	500.313492	998.612431	1.4922	0.00074658	0.22163	0.00011088	1.7139	0.00085746	500.3134663813848	69.058	1.6268	69.058	68.737	70.364	0					123	51	5	0	0	0	0.59203	1	29267	29267		11.64	0	1	53096000			40748	3947	19876	19959	47094	47094					0.11306906374045411
VTIQLAQKV	9	Unmodified	_VTIQLAQKV_					0	0	0		ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	ENSG00000167098|ENST00000356173|SUN5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3143493533134	2	500.313492	998.612431	2.1452	0.0010733	0.17022	8.5162E-05	2.3154	0.0011584	500.3135697268043	68.414	0.81176	68.737	68.408	69.22	0.32223					84	25	5	0	0	0	0.30098	1	28539	28539		25.399	0.40835	1	60185000			40749	3947	19876	19959	47095	47095					0.11306906374045411
VTIRTIPTL	9	Unmodified	_VTIRTIPTL_					0	0	0			REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.3230773806572	2	507.321317	1012.62808	2.1814	0.0011067	0.52597	0.00026684	2.7073	0.0013735	507.32141578344556	62.797	0.18689	63.127	63.006	63.193	0.32974					7	5	2	0	0	0	0.51189	1	26330	26330		14.838	0	1	296190	+		40750	12157	19877	19960	47096	47096					0.12227192891100458
VTIRTIPTL	9	Unmodified	_VTIRTIPTL_					0	0	0			REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	507.321317	1012.62808	2.1814	0.0011067	0.52597	0.00026684	2.7073	0.0013735	507.32141578344556	62.797	0.18689	63.127	63.006	63.193	0.32974	0.14836	0.00073427	NaN	14.838	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	296190	+		40751	12157	19877	19960							0.12227192891100458
VTIRTIPTL	9	Unmodified	_VTIRTIPTL_					0	0	0			REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	507.321317	1012.62808	3.2879	0.001668	-2.1558	-0.0010937	1.1321	0.00057435	507.31961050214886	61.485	0.24667	62.903	62.804	63.051	1.4177	-0.075643	-0.0019868	NaN	14.838	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	465550	+		40752	12157	19877	19960							0.12227192891100458
VTIRTIPTL	9	Unmodified	_VTIRTIPTL_					0	0	0			REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	REV__ENST00000254958.9_1_20:10622115-10622175:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	507.321317	1012.62808	2.895	0.0014687	-1.6449	-0.00083451	1.2501	0.0006342	507.32021477079326	60.941	0.27336	62.906	62.699	62.973	1.9653	-0.072719	-0.0014684	NaN	14.838	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	384250	+		40753	12157	19877	19960							0.12227192891100458
VTITKSVK	8	Unmodified	_VTITKSVK_					0	0	0		nc|ENSG00000104722|P07197-2|NEFM;ENSG00000104722|ENST00000221166|NEFM	nc|ENSG00000104722|P07197-2|NEFM	nc|ENSG00000104722|P07197-2|NEFM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	438.2818176150322	2	438.28166	874.548768	1.3	0.00056977	-1.8592	-0.00081486	-0.55921	-0.00024509	438.28080731657906	73.075	0.37629	73.075	72.872	73.248	0					18	11	2	0	0	0	0.89178	1	30472	30472		0.69038	0	1	1481100			40754	1470	19878	19961	47097	47097					0.1064754593694488
VTITKSVK	8	Unmodified	_VTITKSVK_					0	0	0		nc|ENSG00000104722|P07197-2|NEFM;ENSG00000104722|ENST00000221166|NEFM	nc|ENSG00000104722|P07197-2|NEFM	nc|ENSG00000104722|P07197-2|NEFM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	438.2815429568291	2	438.28166	874.548768	2.5314	0.0011095	-3.5243	-0.0015446	-0.99291	-0.00043517	438.28015897871626	72.921	0.35412	73.246	72.986	73.34	0.32494					29	10	3	0	0	0	0.89178	2	30476	30476;30530		0.69038	0	1	1846400			40755	1470	19878	19961	47098;47099	47098					0.1064754593694488
VTITKSVK	8	Unmodified	_VTITKSVK_					0	0	0		nc|ENSG00000104722|P07197-2|NEFM;ENSG00000104722|ENST00000221166|NEFM	nc|ENSG00000104722|P07197-2|NEFM	nc|ENSG00000104722|P07197-2|NEFM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	438.2817565798759	2	438.28166	874.548768	2.1321	0.00093445	-2.4235	-0.0010622	-0.29138	-0.00012771	438.2803959100375	71.891	0.31316	73.233	73.122	73.435	1.3415					16	9	2	0	0	0	0.89178	1	30221	30221		0.69038	0	1	1153100			40756	1470	19878	19961	47100	47100					0.1064754593694488
VTITKSVK	8	Unmodified	_VTITKSVK_					0	0	0		nc|ENSG00000104722|P07197-2|NEFM;ENSG00000104722|ENST00000221166|NEFM	nc|ENSG00000104722|P07197-2|NEFM	nc|ENSG00000104722|P07197-2|NEFM	MSMS	GG20161007_CRH_Patient100_W632_02	4	438.2816039919853	2	438.28166	874.548768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.666	1	73.49	72.99	73.99	1.824								0	0	0	1.0178	1	30065	30065		0.69038	0	1				40757	1470	19878	19961	47101	47101					0.1064754593694488
VTIVDTVTL	9	Unmodified	_VTIVDTVTL_					0	0	0		MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant;ENSG00000151690|ENST00000392328|MFSD6	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MFSD6|p.V594Sfs*35|1|0.11|ENSG00000151690|chr2:190488804-190488805|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	960.5611450076103	1	960.561189	959.553913	1.0351	0.00099428	0.56328	0.00054106	1.5984	0.0015353	960.5613679692598	71.798	0.4669	73.139	72.905	73.372	1.3415					37	14	4	0	0	0	0.026628	2	30135	30135;30174		92.822	0	1	12680000			40758	3296	19879	19962	47102;47103	47102					0.07251805008922929
VTKGPRGR	8	Unmodified	_VTKGPRGR_					0	0	0			REV__ENST00000566525.5_1_16:771546-771968:+|nuORF	REV__ENST00000566525.5_1_16:771546-771968:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	435.7678405642509	2	435.767043	869.519533	1.6096	0.00070141	-0.17686	-7.7071E-05	1.4327	0.00062433	435.7667798659265	68.651	1.1119	70.504	70.056	71.168	1.853					56	35	2	0	0	0	0.89178	1	28777	28777		0.69038	0	1	1431100	+		40759	9102	19880	19963	47104	47104					0.07955446431321889
VTKGRKKR	8	Unmodified	_VTKGRKKR_					0	0	0			REV__ENSG00000110107|ENST00000227524|PRPF19	REV__ENSG00000110107|ENST00000227524|PRPF19	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	486.8265258669853	2	486.824892	971.635232	3.2262	0.0015706	-0.42141	-0.00020515	2.8048	0.0013654	486.8249775013867	107.64	0.24231	107.8	107.66	107.9	0.15795					51	12	5	0	0	0	0.89198	1	46316	46316		0	0	1	4715600000	+		40760	9293	19881	19964	47105	47105					0.14827970282169645
VTKIELLP	8	Unmodified	_VTKIELLP_					0	0	0		SLC34A2|p.Y54Sfs*6|1|0.09|ENSG00000157765|chr4:25662753-25662753|A/-|frameshift_variant;SLC34A2|p.A412Lfs*4|1|0.07|ENSG00000157765|chr4:25674309-25674310|-/TT|frameshift_variant;nc|ENSG00000157765|O95436-2|SLC34A2;ENSG00000157765|ENST00000382051|SLC34A2	SLC34A2|p.Y54Sfs*6|1|0.09|ENSG00000157765|chr4:25662753-25662753|A/-|frameshift_variant	SLC34A2|p.Y54Sfs*6|1|0.09|ENSG00000157765|chr4:25662753-25662753|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2479736208916	3	304.863666	911.569169	-0.26955	-8.2177E-05	0.68583	0.00020908	0.41628	0.00012691	304.86424686490994	19.956	0.39223	21.48	21.256	21.649	1.5237					21	12	2	0	0	0	2.3239	1	8343	8343		0	0	1	263040			40761	3481	19882	19965	47106	47106					0.10984716596760791
VTKKVLPQ	8	Unmodified	_VTKKVLPQ_					0	0	0		tr|A0A7D6VTH8|A0A7D6VTH8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02410PE=4SV=1	tr|A0A7D6VTH8|A0A7D6VTH8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02410PE=4SV=1	tr|A0A7D6VTH8|A0A7D6VTH8_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7992736697197	2	456.797478	911.580402	3.3623	0.0015359	-1.0301	-0.00047054	2.3322	0.0010653	456.7978057266425	109.2	0.24814	109.36	109.23	109.48	0.15898					36	11	4	0	0	0	0.89187	2	47362	47362;47431		0.69038	0	1	44111000			40762	16919	19883	19966	47107;47108	47107					0.12107538690884212
VTKLLRRAKRR	11	Unmodified	_VTKLLRRAKRR_					0	0	0			REV__ENSG00000125910|ENST00000246115|S1PR4	REV__ENSG00000125910|ENST00000246115|S1PR4	MSMS	GG20161007_CRH_Patient100_A02_01	1	698.9709960818291	2	698.970411	1395.92627	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.937	1	40.937	40.437	41.437	0								0	0	0	0.63775	1	17146	17146		1.1933	0.79263	1		+		40763	9685	19884	19967	47109	47109					0.2441428892723252
VTKRLKRRRR	10	Unmodified	_VTKRLKRRRR_					0	0	0			REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1	REV__nc|ENSG00000116793|Q9UMS5-2|PHTF1	MSMS	GG20161007_CRH_Patient100_A02_01	1	684.9619628787041	2	684.960378	1367.9062	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.419	1	25.419	24.919	25.919	0								0	0	0	0.6624	1	10608	10608		0.40072	0.050084	1		+		40764	9483	19885	19968	47110	47110					0.23696537987279953
VTKSKDLL	8	Unmodified	_VTKSKDLL_					0	0	0			REV__CHUK|p.F387L|1|0.06|ENSG00000213341|chr10:100207300-100207300|A/T|missense_variant	REV__CHUK|p.F387L|1|0.06|ENSG00000213341|chr10:100207300-100207300|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	452.2788879275322	2	452.279118	902.543683	2.879	0.0013021	-3.0975	-0.0014009	-0.21844	-9.8794E-05	452.2777293727198	72.527	0.71342	74.337	73.861	74.574	1.8101					42	22	3	0	0	0	0.89176	1	30475	30475		0.79363	0	1	2690200	+		40765	8356	19886	19969	47111	47111					0.08851242074331367
VTLAIAVINV	10	Unmodified	_VTLAIAVINV_					0	0	0		ENST00000571335.5_1_17:19445708-19459199:+|nuORF;nc|ENSG00000142494|Q96FL8-2|SLC47A1;ENST00000497548.5_1_17:19437252-19459239:+|nuORF;ENSG00000142494|ENST00000270570|SLC47A1;nc|ENSG00000142494|Q96FL8-3|SLC47A1	ENST00000571335.5_1_17:19445708-19459199:+|nuORF	ENST00000571335.5_1_17:19445708-19459199:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	338.2172729372978	3	338.21822	1011.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.939	1	98.939	98.439	99.439	0								0	0	0	0.66222	1	41401	41401		0.69767	0	1				40766	2996	19887	19970	47112	47112					0.1274807703384795
VTLAKMRV	8	Unmodified	_VTLAKMRV_					0	0	0		ENSG00000158717|ENST00000312838|RNF166	ENSG00000158717|ENST00000312838|RNF166	ENSG00000158717|ENST00000312838|RNF166	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1730529665947	2	459.28368	916.552807	2.4145	0.001109	-2.0479	-0.00094056	0.36665	0.0001684	459.28239762761535	83.05	0.15469	84.688	84.636	84.791	1.6379					7	4	2	0	0	0	2.3239	1	34864	34864		8.5933	0	1	1076200			40767	3508	19888	19971	47113	47113					0.09119312159009496
VTLALSTYLA	10	Unmodified	_VTLALSTYLA_					0	0	0			REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3043090701103	2	526.305332	1050.59611	3.7176	0.0019566	-4.2601	-0.0022421	-0.54249	-0.00028551	526.3036016034047	81.809	0.40211	83.022	82.759	83.162	1.2125					20	12	2	0	0	0	0.47063	1	34330	34330		29.082	2.1979	1	883500	+		40768	15145	19889	19972	47114	47114					0.07283780417265007
VTLALSTYLA	10	Unmodified	_VTLALSTYLA_					0	0	0			REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	526.305332	1050.59611	3.7176	0.0019566	-4.2601	-0.0022421	-0.54249	-0.00028551	526.3036016034047	81.809	0.40211	83.022	82.759	83.162	1.2125	0.016471	-0.00081504	NaN	29.082	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	883500	+		40769	15145	19889	19972							0.07283780417265007
VTLALSTYLA	10	Unmodified	_VTLALSTYLA_					0	0	0			REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	REV__tr|A0A553SR40|A0A553SR40_NIACIMethyl-acceptingchemotaxisproteinOS=NialliacirculansOX=1397GN=CEQ21_00195PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	526.305332	1050.59611	3.3679	0.0017726	-2.6825	-0.0014118	0.68545	0.00036076	526.3044215547418	81.293	0.40174	82.989	82.735	83.136	1.6959	-0.016471	0.00084555	NaN	29.082	17	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1224200	+		40770	15145	19889	19972							0.07283780417265007
VTLATGVLCL	10	Unmodified	_VTLATGVLCL_					0	0	0		ENSG00000140274|ENST00000323030|DUOXA2	ENSG00000140274|ENST00000323030|DUOXA2	ENSG00000140274|ENST00000323030|DUOXA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	495.2882263064384	2	495.288628	988.562703	1.6229	0.00080382	-1.2022	-0.00059543	0.42074	0.00020839	495.2882129550225	54.728	0.45373	56.133	55.931	56.385	1.4048					37	14	3	0	0	0	0.28892	1	22909	22909		39.957	1.9833	1	6387600			40771	2906	19890	19973	47115	47115					0.06796455373716981
VTLEEVQKKL	10	Unmodified	_VTLEEVQKKL_					0	0	0			REV__tr|A0A7D6ZGB9|A0A7D6ZGB9_9CLOTPocRligand-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17685PE=4SV=1	REV__tr|A0A7D6ZGB9|A0A7D6ZGB9_9CLOTPocRligand-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.8583862185478	2	593.855721	1185.69689	2.8399	0.0016865	-0.5723	-0.00033986	2.2676	0.0013466	593.8557513262805	61.905	0.2498	63.862	63.689	63.938	1.9571					13	7	2	0	0	0	0.78179	1	25979	25979		16.149	0	1	1294700	+		40772	15639	19891	19974	47116	47116					0.11146812400124873
VTLEKWMTL	9	Unmodified	_VTLEKWMTL_					0	0	0			REV__ENST00000445744.3_1_5:70388919-70389012:-|nuORF	REV__ENST00000445744.3_1_5:70388919-70389012:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	560.8041259646416	2	560.807185	1119.59982	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.421	1	53.396	52.896	53.896	1.9753								0	0	0	0.3792	1	21550	21550		10.824	0.75	1		+		40773	13103	19892	19975	47117	47117					0.04480126919497707
VTLFGKAI	8	Unmodified	_VTLFGKAI_					0	0	0		ENSG00000126821|ENST00000247225|SGPP1	ENSG00000126821|ENST00000247225|SGPP1	ENSG00000126821|ENST00000247225|SGPP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	424.7675964236259	2	424.765646	847.516739	1.0964	0.00046572	1.3993	0.00059436	2.4957	0.0010601	424.7659982212477	57.973	0.25728	57.973	57.817	58.074	0					11	7	2	0	0	0	0.87106	2	24155	24155;24205		14.582	0	1	388740			40774	2318	19893	19976	47118;47119	47118					0.08688178253805745
VTLFWCIR	8	Unmodified	_VTLFWCIR_					0	0	0		CATSPER4|p.G237Wfs*33|1|0.06|ENSG00000188782|chr1:26198314-26198315|-/C|frameshift_variant	CATSPER4|p.G237Wfs*33|1|0.06|ENSG00000188782|chr1:26198314-26198315|-/C|frameshift_variant	CATSPER4|p.G237Wfs*33|1|0.06|ENSG00000188782|chr1:26198314-26198315|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	346.5258361697197	3	346.524879	1036.55281	0.55828	0.00019346	3.8286	0.0013267	4.3869	0.0015202	346.52588138696007	67.152	0.36338	68.541	68.343	68.706	1.3888					21	11	2	0	0	0	0.87276	1	28176	28176		10.074	2.9722	1	2485600			40775	122	19894	19977	47120	47120					0.0359931215900815
VTLGKGLAC	9	Unmodified	_VTLGKGLAC_					0	0	0			REV__ENST00000480190.1_1_2:25015819-25015861:-|nuORF	REV__ENST00000480190.1_1_2:25015819-25015861:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	431.7787048220634	2	431.246763	860.478974	3.2951	0.001421	2.912	0.0012558	6.2072	0.0026768	431.2476303381595	106.16	0.090263	106.32	106.27	106.36	0.16174					7	4	2	0	0	0	0.11719	1	45336	45336		7.2892	2.0586	1	4539600	+		40776	13343	19895	19978	47121	47121					0.04315343996677257
VTLGLTGF	8	Unmodified	_VTLGLTGF_					0	0	0			REV__ENSG00000064703|ENST00000369702|DDX20	REV__ENSG00000064703|ENST00000369702|DDX20	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.2338439822197	2	404.234179	806.453805	0.34011	0.00013748	-1.8388	-0.00074329	-1.4987	-0.00060581	404.23330427634613	65.895	0.64127	65.895	65.612	66.253	0					48	19	4	0	0	0	0.88587	1	27416	27416		5.2307	0	1	10532000	+		40777	8664	19896	19979	47122	47122					0.04283612465758324
VTLGLTGF	8	Unmodified	_VTLGLTGF_					0	0	0			REV__ENSG00000064703|ENST00000369702|DDX20	REV__ENSG00000064703|ENST00000369702|DDX20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2335693240166	2	404.234179	806.453805	2.2906	0.00092594	-2.8387	-0.0011475	-0.54812	-0.00022157	404.23274227254456	64.291	0.90793	66.219	65.643	66.551	1.928					54	28	4	0	0	0	0.88587	1	26962	26962		5.2307	0	1	8697700	+		40778	8664	19896	19979	47123	47123					0.04283612465758324
VTLGLTGF	8	Unmodified	_VTLGLTGF_					0	0	0			REV__ENSG00000064703|ENST00000369702|DDX20	REV__ENSG00000064703|ENST00000369702|DDX20	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	404.234179	806.453805	2.7506	0.0011119	-3.4801	-0.0014068	-0.72949	-0.00029488	404.23259548939285	64.747	0.61459	66.154	65.71	66.324	1.4071	0.062234	-0.00048303	NaN	5.2307	38	19	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7813400	+		40779	8664	19896	19979							0.04283612465758324
VTLIVSVLTV	10	Unmodified	_VTLIVSVLTV_					0	0	0		ENSG00000174599|ENST00000310754|TRAM1L1	ENSG00000174599|ENST00000310754|TRAM1L1	ENSG00000174599|ENST00000310754|TRAM1L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3401367068291	2	522.339175	1042.6638	3.2646	0.0017052	-0.70143	-0.00036638	2.5632	0.0013389	522.3387938698619	107.57	0.22183	107.73	107.6	107.83	0.15781					54	11	6	0	0	0	0.89803	2	46255	46255;46316		0	0	1	2176100000			40780	4334	19897	19980	47124;47125	47124					0.14417230348067278
VTLKGIIRT	9	Unmodified	_VTLKGIIRT_					0	0	0		tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2235900759697	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.527	1	88.761	88.261	89.261	0.23471								0	0	0	0.42693	1	37118	37118		0	0	1				40781	17210	19898	19981	47126	47126					0.14422899128010158
VTLKGIIRT	9	Unmodified	_VTLKGIIRT_					0	0	0		tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	tr|A0A7D6ZZF7|A0A7D6ZZF7_9CLOTAmidohydrolaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.2228271365166	3	334.221965	999.644065	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.652	1	88.886	88.386	89.386	0.23471								0	0	0	0.42693	1	37169	37169		0	0	1				40782	17210	19898	19981	47127	47127					0.14422899128010158
VTLKKSLLK	9	Unmodified	_VTLKKSLLK_					0	0	0		ENST00000254624.9_3_8:133008724-133014042:+|nuORF	ENST00000254624.9_3_8:133008724-133014042:+|nuORF	ENST00000254624.9_3_8:133008724-133014042:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	515.3572875857353	2	515.35516	1028.69577	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.3	109.8	110.8	0.15228								0	0	0	0.42693	1	47777	47777		0	0	1				40783	5594	19899	19982	47128	47128					0.18256642821893365
VTLKRDRS	8	Unmodified	_VTLKRDRS_					0	0	0		nc|ENSG00000204991|Q8WWL2-4|SPIRE2;nc|ENSG00000204991|Q8WWL2-3|SPIRE2;nc|ENSG00000204991|Q8WWL2-2|SPIRE2;ENST00000569108.5_1_16:89916567-89936677:+|nuORF;ENSG00000204991|ENST00000378247|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	nc|ENSG00000204991|Q8WWL2-4|SPIRE2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.7930175662041	2	487.790715	973.566878	2.644	0.0012897	-0.21506	-0.00010491	2.4289	0.0011848	487.7906148936026	64.472	2.1473	64.801	63.94	66.087	0.32899					106	67	2	0	0	0	0.88163	1	26966	26966		7.9102	0	1	1452800			40784	5171	19900	19983	47129	47129					0.07903680911658739
VTLLAAEFL	9	Unmodified	_VTLLAAEFL_					0	0	0		nc|ENSG00000135624|Q99832-4|CCT7;nc|ENSG00000135624|Q99832-3|CCT7;ENSG00000135624|ENST00000258091|CCT7;ENST00000406551.2_1_6:150201187-150201547:+|nuORF;ENST00000480489.5_1_2:73461506-73470269:+|nuORF;ENST00000461290.5_1_2:73461506-73471178:+|nuORF	nc|ENSG00000135624|Q99832-4|CCT7	nc|ENSG00000135624|Q99832-4|CCT7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	488.7893859744072	2	488.789318	975.564084	4.7316	0.0023128	-3.1682	-0.0015486	1.5634	0.00076417	488.78768258271816	89.099	0.4434	90.504	90.233	90.677	1.4045					33	13	3	0	0	0	0.13873	1	37534	37534		39.957	0	1	3332200			40785	2678	19901	19984	47130	47130					0.075324127341446
VTLLLGLLLP	10	Unmodified	_VTLLLGLLLP_					0	0	0		ENST00000316341.7_1_16:67977830-67978124:-|nuORF;ENSG00000213398|ENST00000264005|LCAT	ENST00000316341.7_1_16:67977830-67978124:-|nuORF	ENST00000316341.7_1_16:67977830-67978124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2432433962822	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89803	1	8432	8432		0.15932	0	1	155460000			40786	5217	19902	19985	47131	47131					0.18194411107424457
VTLLLGLLLP	10	Unmodified	_VTLLLGLLLP_					0	0	0		ENST00000316341.7_1_16:67977830-67978124:-|nuORF;ENSG00000213398|ENST00000264005|LCAT	ENST00000316341.7_1_16:67977830-67978124:-|nuORF	ENST00000316341.7_1_16:67977830-67978124:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2423278689384	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	1	7376	7376		0.15932	0	1	364430000			40787	5217	19902	19985	47132	47132					0.18194411107424457
VTLLRDER	8	Unmodified	_VTLLRDER_					0	0	0		ENSG00000106341|ENST00000342032|PPP1R17;nc|ENSG00000106341|O96001-2|PPP1R17	ENSG00000106341|ENST00000342032|PPP1R17	ENSG00000106341|ENST00000342032|PPP1R17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.2901183962822	2	501.290548	1000.56654	2.0378	0.0010215	-0.088798	-4.4513E-05	1.949	0.00097702	501.2901365748803	82.17	0.66705	82.17	81.701	82.368	0					33	21	3	0	0	0	0.89051	1	34178	34178		2.3027	0	1	2451300			40788	1566	19903	19986	47133	47133					0.06628261191792717
VTLLTSLVE	9	Unmodified	_VTLLTSLVE_					0	0	0		ENSG00000116819|ENST00000373235|TFAP2E;TFAP2B|p.E315D|1|0.44|ENSG00000008196|chr6:50840160-50840160|A/T|missense_variant;nc|ENSG00000087510|Q92754-2|TFAP2C;nc|ENSG00000137203|P05549-2|TFAP2A;nc|ENSG00000137203|P05549-5|TFAP2A;nc|ENSG00000137203|P05549-6|TFAP2A;nc|ENSG00000137203|P05549|TFAP2A;ENSG00000137203|ENST00000379613|TFAP2A;ENSG00000087510|ENST00000201031|TFAP2C;ENSG00000008197|ENST00000008391|TFAP2D;ENSG00000008196|ENST00000393655|TFAP2B;nc|ENSG00000008196|Q92481-2|TFAP2B	ENSG00000116819|ENST00000373235|TFAP2E;nc|ENSG00000008196|Q92481-2|TFAP2B	ENSG00000116819|ENST00000373235|TFAP2E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5800659060478	1	974.576839	973.569563	2.0849	0.0020319	-0.33563	-0.00032709	1.7493	0.0017048	974.5770672833137	91.648	0.3194	91.648	91.436	91.756	0					22	9	3	0	0	0	0.031324	1	38293	38293		85.357	0	1	1991300			40789	1988;7811	19904	19987	47134	47134					0.08172091525955238
VTLLTSLVE	9	Unmodified	_VTLLTSLVE_					0	0	0		ENSG00000116819|ENST00000373235|TFAP2E;TFAP2B|p.E315D|1|0.44|ENSG00000008196|chr6:50840160-50840160|A/T|missense_variant;nc|ENSG00000087510|Q92754-2|TFAP2C;nc|ENSG00000137203|P05549-2|TFAP2A;nc|ENSG00000137203|P05549-5|TFAP2A;nc|ENSG00000137203|P05549-6|TFAP2A;nc|ENSG00000137203|P05549|TFAP2A;ENSG00000137203|ENST00000379613|TFAP2A;ENSG00000087510|ENST00000201031|TFAP2C;ENSG00000008197|ENST00000008391|TFAP2D;ENSG00000008196|ENST00000393655|TFAP2B;nc|ENSG00000008196|Q92481-2|TFAP2B	ENSG00000116819|ENST00000373235|TFAP2E;nc|ENSG00000008196|Q92481-2|TFAP2B	ENSG00000116819|ENST00000373235|TFAP2E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5793945193291	1	974.576839	973.569563	1.9618	0.0019119	-0.043974	-4.2856E-05	1.9178	0.0018691	974.5766166028416	66.409	0.60065	66.733	66.495	67.096	0.32449					40	18	3	0	0	0	0.031324	1	27780	27780		85.357	0	1	2625700			40790	1988;7811	19904	19987	47135	47135					0.08172091525955238
VTLNITKE	8	Unmodified	_VTLNITKE_					0	0	0			REV__nc|ENSG00000165478|Q14CZ8-2|HEPACAM	REV__nc|ENSG00000165478|Q14CZ8-2|HEPACAM	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	917.5272704958916	1	917.530224	916.522947	1.8999	0.0017432	-2.0718	-0.0019009	-0.17188	-0.00015771	917.5284999952568	58.861	0.25302	58.861	58.752	59.005	0					9	7	2	0	0	0	0.55531	1	24555	24555		43.858	0	1	473690	+		40791	10780	19905	19988	47136	47136					0.061346516946514384
VTLNYTASV	9	Unmodified	_VTLNYTASV_					0	0	0			REV__ENST00000532739.1_1_16:16459039-16460653:+|nuORF	REV__ENST00000532739.1_1_16:16459039-16460653:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	484.2581664919853	2	484.258382	966.502212	2.2639	0.0010963	-3.0452	-0.0014747	-0.78127	-0.00037834	484.2569033256404	61.374	0.31676	61.374	61.203	61.52	0					19	9	3	0	0	0	0.20244	1	25609	25609		32.786	0	1	1735900	+		40792	13723	19906	19989	47137	47137					0.017620613149915698
VTLPILLGG	9	Unmodified	_VTLPILLGG_					0	0	0		ENST00000435366.2_2_20:33864837-33865065:-|nuORF	ENST00000435366.2_2_20:33864837-33865065:-|nuORF	ENST00000435366.2_2_20:33864837-33865065:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	882.5695068240166	1	882.565881	881.558604	0.4066	0.00035885	2.8276	0.0024956	3.2342	0.0028544	882.5702780429127	22.647	0.11558	24.299	24.259	24.375	1.6511					6	3	2	0	0	0	0.85403	1	9464	9464		0	0	1	902940			40793	6523	19907	19990	47138	47138					0.11308733942348681
VTLPPVTQ	8	Unmodified	_VTLPPVTQ_					0	0	0			REV__nc|ENSG00000171813|Q6NUJ5-2|PWWP2B	REV__nc|ENSG00000171813|Q6NUJ5-2|PWWP2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.7549621462822	2	427.752736	853.490919	2.7857	0.0011916	3.339	0.0014283	6.1247	0.0026199	427.75369309965663	76.104	0.50023	77.872	77.627	78.127	1.7672					33	15	3	0	0	0	0.8909	1	31954	31954		2.0598	0	1	2331200	+		40794	11046	19908	19991	47139	47139					0.0583128401152635
VTLQLLKP	8	Unmodified	_VTLQLLKP_					0	0	0		ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5353881716728	3	304.535661	910.585153	0.011205	3.4124E-06	1.3168	0.00040102	1.328	0.00040444	304.5361102748744	22.148	1.1307	22.371	22.205	23.336	0.223					56	37	4	0	0	0	0.89051	1	9209	9209		1.4819	0	1	13326000			40795	5955	19909	19992	47140	47140					0.1262842283366581
VTLQLLKP	8	Unmodified	_VTLQLLKP_					0	0	0		ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	304.5364868044853	3	304.535661	910.585153	0.57631	0.00017551	3.6398	0.0011084	4.2161	0.0012839	304.5365910702305	32.548	1.4941	32.842	32.497	33.991	0.29431					73	50	3	0	0	0	0.89051	2	13671	13671;13723		1.4819	0	1	3451200			40796	5955	19909	19992	47141;47142	47141					0.1262842283366581
VTLQLLKP	8	Unmodified	_VTLQLLKP_					0	0	0		ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5363342165947	3	304.535661	910.585153	-0.34553	-0.00010523	1.9601	0.00059691	1.6145	0.00049168	304.53621774720295	18.041	0.97282	19.489	19.175	20.147	1.448					91	32	4	0	0	0	0.89181	1	7473	7473		0.35063	0	1	16690000			40797	5955	19909	19992	47143	47143					0.1262842283366581
VTLQLLKP	8	Unmodified	_VTLQLLKP_					0	0	0		ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	304.5360900759697	3	304.535661	910.585153	-0.2394	-7.2905E-05	1.876	0.00057132	1.6366	0.00049841	304.53622473513764	20.617	1.041	22.192	21.997	23.038	1.5748					67	34	4	0	0	0	0.88663	1	8584	8584		3.2813	0	1	9542700			40798	5955	19909	19992	47144	47144					0.1262842283366581
VTLQLLKP	8	Unmodified	_VTLQLLKP_					0	0	0		ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	ENST00000344120.4_1_5:141699332-141704471:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	304.535661	910.585153	0.16869	5.1372E-05	2.8191	0.00085852	2.9878	0.00090989	304.5364016704895	30.836	1.3324	32.651	32.388	33.721	1.8151	-0.098676	-0.00041213	NaN	1.4819	85	47	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4243800			40799	5955	19909	19992							0.1262842283366581
VTLSFLIVNL	10	Unmodified	_VTLSFLIVNL_					0	0	0			REV__NSFL1C-EPSTI1|1|fusion	REV__NSFL1C-EPSTI1|1|fusion	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	559.7762328982353	2	559.844625	1117.6747	2.7021	0.0015128	-3.5173	-0.0019692	-0.81522	-0.00045639	559.8432632429266	75.449	0.18282	77.231	77.135	77.318	1.7817					7	5	2	0	0	0	0.1245	1	31633	31633		10.824	3.5347	1	174300	+		40800	14435	19910	19993	47145	47145					0.12056632722374161
VTLSKKKEV	9	Unmodified	_VTLSKKKEV_					0	0	0		tr|A0A553SPW8|A0A553SPW8_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10980PE=3SV=1	tr|A0A553SPW8|A0A553SPW8_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10980PE=3SV=1	tr|A0A553SPW8|A0A553SPW8_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10980PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3256713747978	2	516.326599	1030.63865	1.8293	0.00094452	-2.2613	-0.0011676	-0.43205	-0.00022308	516.3252283064769	83.483	0.33705	85.121	85.01	85.347	1.6379					18	10	2	0	0	0	0.5697	1	35009	35009		12.532	2.4576	1	5656800			40801	16487	19911	19994	47146	47146					0.12455175545505881
VTLTAGAP	8	Unmodified	_VTLTAGAP_					0	0	0			REV__NAGLU|p.W268Tfs*42|1|0.1|ENSG00000108784|chr17:42540986-42540987|-/ACTCCTTCGTGTGGTGGGACTGGGCCCGC|frameshift_variant	REV__NAGLU|p.W268Tfs*42|1|0.1|ENSG00000108784|chr17:42540986-42540987|-/ACTCCTTCGTGTGGTGGGACTGGGCCCGC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2113525271416	2	365.210704	728.406855	0.21999	8.0342E-05	2.4852	0.00090762	2.7052	0.00098796	365.21135794133727	25.399	0.519	26.658	26.468	26.987	1.2594					28	16	3	0	0	0	0.89176	1	10661	10661		0.79363	0	1	1822500	+		40802	14372	19912	19995	47147	47147					0.03178752914618599
VTLTLLLLK	9	Unmodified	_VTLTLLLLK_					0	0	0			REV__nc|ENSG00000180424|Q8N688-2|DEFB123	REV__nc|ENSG00000180424|Q8N688-2|DEFB123	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	338.3436767458916	3	338.570483	1012.68962	1.8969	0.00064224	2.3177	0.00078472	4.2147	0.001427	338.5717924972392	112.94	0.095993	113.11	113.04	113.13	0.16914					4	2	2	0	0	0	0.11955	1	48965	48965		0.23584	0	1	127330	+		40803	11296	19913	19996	47148	47148					0.18378124590378775
VTLTPGQN	8	Unmodified	_VTLTPGQN_					0	0	0			REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	415.2238342165947	2	415.224342	828.434132	2.1576	0.00089591	-1.4309	-0.00059415	0.72673	0.00030175	415.2235656063384	65.76	0.37676	66.087	65.77	66.147	0.32689					22	11	3	0	0	0	0.89051	1	27509	27509		2.3027	0	1	788240	+		40804	10038	19914	19997	47149	47149					0.013052364549935191
VTLTPGQN	8	Unmodified	_VTLTPGQN_					0	0	0			REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	415.224342	828.434132	0.64916	0.00026955	-0.13294	-5.5199E-05	0.51622	0.00021435	415.22441623826296	65.913	0.25157	65.913	65.741	65.992	0	-0.16431	0.00099205	NaN	2.3027	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	747280	+		40805	10038	19914	19997							0.013052364549935191
VTLTPGQN	8	Unmodified	_VTLTPGQN_					0	0	0			REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	415.224342	828.434132	2.1576	0.00089591	-1.4309	-0.00059415	0.72673	0.00030175	415.2235656063384	65.76	0.37676	66.087	65.77	66.147	0.32689	0.009144	-8.586E-05	NaN	2.3027	22	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	788240	+		40806	10038	19914	19997							0.013052364549935191
VTLTPGQN	8	Unmodified	_VTLTPGQN_					0	0	0			REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	REV__ENST00000467790.5_1_1:79115880-79120915:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	415.224342	828.434132	2.9467	0.0012235	-2.4068	-0.00099938	0.53988	0.00022417	415.22321471004454	64.672	0.46249	66.079	65.894	66.356	1.4071	0.0011471	-0.0008963	NaN	2.3027	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	844210	+		40807	10038	19914	19997							0.013052364549935191
VTLTRLLL	8	Unmodified	_VTLTRLLL_					0	0	0			REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.8148376345634	2	464.813128	927.611703	1.5388	0.00071527	-0.14878	-6.9153E-05	1.3901	0.00064612	464.81350273685734	107.75	0.27075	107.75	107.62	107.89	0					49	14	5	0	0	0	0.89008	1	46228	46228		2.5775	0	1	1548499999.9999998	+		40808	12453	19915	19998	47150	47150					0.1450011172498762
VTLTRLLL	8	Unmodified	_VTLTRLLL_					0	0	0			REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	REV__ENST00000332780.3_1_3:49213230-49213359:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	464.8147155642509	2	464.813128	927.611703	3.4286	0.0015937	-1.8287	-0.00085002	1.5999	0.00074364	464.81262542725875	107.73	0.23581	107.78	107.66	107.89	0.052452					46	12	5	0	0	0	0.89178	1	46113	46113		0.69038	0	1	1426800000	+		40809	12453	19915	19998	47151	47151					0.1450011172498762
VTLVPGIP	8	Unmodified	_VTLVPGIP_					0	0	0		nc|ENSG00000075292|Q14966-3|ZNF638;ENSG00000075292|ENST00000264447|ZNF638;nc|ENSG00000075292|Q14966-5|ZNF638	nc|ENSG00000075292|Q14966-3|ZNF638	nc|ENSG00000075292|Q14966-3|ZNF638	MSMS	GG20161007_CRH_Patient100_W632_02	4	398.3065063357353	2	398.252372	794.49019	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.2	1	103.38	102.88	103.88	0.18066								0	0	0	1.0178	1	43434	43434		0.79363	0	1				40810	928	19916	19999	47152	47152					0.08472489362475244
VTLVSISSV	9	Unmodified	_VTLVSISSV_					0	0	0			REV__tr|A0A553SF58|A0A553SF58_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08095PE=4SV=1	REV__tr|A0A553SF58|A0A553SF58_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_08095PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	453.3439819216728	2	452.771126	903.527698	2.8074	0.0012711	0.29205	0.00013223	3.0994	0.0014033	452.7711406017234	80.492	0.24289	81.743	81.669	81.912	1.2512					17	7	3	0	0	0	0.10844	1	33819	33819		16.942	5.302	1	1848400	+		40811	14690	19917	20000	47153	47153					0.07207535837437717
VTLYYACYL	9	Unmodified	_VTLYYACYL_					0	0	0		L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|91|3|anti-sense	L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|91|3|anti-sense	L1MEg_dup1746|chr2:99099337-99100538:+|1.3153921071676258|0.3908750287807103|1.75|429.0|91|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7726318240166	2	554.772811	1107.53107	2.3075	0.0012801	-3.9768	-0.0022062	-1.6693	-0.00092608	554.7707725159134	82.907	0.3109	84.577	84.447	84.758	1.67					15	9	2	0	0	0	0.22519	1	34781	34781		30.225	8.6878	1	1531300			40812	7722	19918	20001	47154	47154					-0.018395373802377435
VTMDSNFVPV	10	Unmodified	_VTMDSNFVPV_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7733642458916	2	554.7708	1107.52705	1.9348	0.0010734	2.9622	0.0016434	4.8971	0.0027168	554.7722135322789	83.407	0.34708	84.595	84.42	84.767	1.1879					18	10	2	0	0	0	0.63205	1	35007	35007		21.537	4.4241	1	1711900			40813	3911	19919	20002	47155	47155					-0.022416268739334555
VTMKKIHHL	9	Unmodified	_VTMKKIHHL_					0	0	0			REV__ENSG00000111647|ENST00000279907|BLTP3B	REV__ENSG00000111647|ENST00000279907|BLTP3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8323242068291	2	553.828786	1105.64302	2.5699	0.0014233	0.58684	0.00032501	3.1567	0.0017483	553.8301011990817	72.697	1.2859	74.507	74.137	75.423	1.8101					83	40	3	0	0	0	0.82604	1	30529	30529		2.3027	0	1	1704700	+		40814	9334	19920	20003	47156	47156					0.09442361487435846
VTMTNVTGL	9	Unmodified	_VTMTNVTGL_					0	0	0			REV__ENST00000607016.1_1_6:34253488-34253581:-|nuORF	REV__ENST00000607016.1_1_6:34253488-34253581:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2473022341728	2	468.24696	934.479368	2.3641	0.001107	-1.3548	-0.00063438	1.0093	0.00047259	468.2462081021654	47.075	0.25301	48.457	48.346	48.599	1.3825					12	7	2	0	0	0	0.34572	1	19705	19705		23.148	0	1	1026900	+		40815	14141	19921	20004	47157	47157					0.00950718925878391
VTMTNVTGL	9	Unmodified	_VTMTNVTGL_					0	0	0			REV__ENST00000607016.1_1_6:34253488-34253581:-|nuORF	REV__ENST00000607016.1_1_6:34253488-34253581:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	468.24696	934.479368	2.3641	0.001107	-1.3548	-0.00063438	1.0093	0.00047259	468.2462081021654	47.075	0.25301	48.457	48.346	48.599	1.3825	-0.077545	0.00015488	NaN	23.148	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1026900	+		40816	14141	19921	20004							0.00950718925878391
VTNRVRERLI	10	Unmodified	_VTNRVRERLI_					0	0	0		tr|A0A553SHS2|A0A553SHS2_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	tr|A0A553SHS2|A0A553SHS2_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	tr|A0A553SHS2|A0A553SHS2_NIACIPhosphonateABCtransporter,permeaseproteinPhnEOS=NialliacirculansOX=1397GN=phnEPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3839599490166	2	628.383303	1254.75205	2.0785	0.0013061	-1.1024	-0.00069272	0.97615	0.0006134	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.85124	1	33487	33487		6.7232	2.7788	1	6184900			40817	16166	19922	20005	47158	47158					0.1348666371127365
VTNVENNLDRE	11	Unmodified	_VTNVENNLDRE_					0	0	0		tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	tr|A0A7D6VT44|A0A7D6VT44_9CLOTSHOCTdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19125PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823730349541	3	434.880996	1301.62116	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.27	1	110.32	109.82	110.82	0.048843								0	0	0	0.63775	1	47578	47578		0	0	1				40818	16898	19923	20006	47159	47159					-0.017588165181223303
VTPEKFLYI	9	Unmodified	_VTPEKFLYI_					0	0	0			REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	REV__L1PB1_dup732|chr1:227528334-227533261:-|1.5253327879556793|0.4841042275833316|1.66|429.0|165|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1109.626513659954	1	1109.62412	1108.61685	2.7855	0.0030909	1.5739	0.0017464	4.3594	0.0048373	1109.625502273997	101.07	0.14357	101.25	101.17	101.31	0.18047					11	4	3	0	0	0	0.70108	1	42524	42524		7.2892	0	1	62227000	+		40819	14342	19924	20007	47160	47160					0.06688370796928211
VTPFLLPH	8	Unmodified	_VTPFLLPH_					0	0	0		tr|A0A7D7A0D2|A0A7D7A0D2_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09475PE=4SV=1	tr|A0A7D7A0D2|A0A7D7A0D2_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09475PE=4SV=1	tr|A0A7D7A0D2|A0A7D7A0D2_9CLOTATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09475PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	462.2700988650322	2	462.271096	922.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.38	1	103.56	103.06	104.06	0.18066								0	0	0	1.0178	1	43521	43521		2.5775	0	1				40820	17223	19925	20008	47161	47161					0.06327580628078522
VTPKSYLSF	9	Unmodified	_VTPKSYLSF_					0	0	0		DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5;DNAH8|p.H3947Qfs*36|1|0.13|ENSG00000124721|chr6:38971631-38971638|ATGCTCGA/-|frameshift_variant;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.8206054568291	2	521.2844	1040.55425	3.056	0.0015931	-0.099487	-5.1861E-05	2.9565	0.0015412	521.2848938451524	60.771	0.18319	62.736	62.637	62.82	1.9653					8	5	2	0	0	0	0.082477	1	25525	25525		25.399	0	1	565150			40821	416	19926	20009	47162	47162					0.035592247287468126
VTPKSYLSF	9	Unmodified	_VTPKSYLSF_					0	0	0		DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant;ENSG00000039139|ENST00000265104|DNAH5;DNAH8|p.H3947Qfs*36|1|0.13|ENSG00000124721|chr6:38971631-38971638|ATGCTCGA/-|frameshift_variant;nc|ENSG00000124721|Q96JB1-2|DNAH8;nc|ENSG00000124721|Q96JB1|DNAH8;ENSG00000124721|ENST00000327475|DNAH8	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	DNAH5|p.Q3841Afs*11|1|0.21|ENSG00000039139|chr5:13735855-13735867|GAAGCGAAGTCTG/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	521.2844	1040.55425	3.1853	0.0016604	0.72796	0.00037947	3.9132	0.0020399	521.2854993090845	61.296	0.17996	62.714	62.624	62.804	1.4177	-0.010909	0.00052078	NaN	25.399	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	693370			40822	416	19926	20009							0.035592247287468126
VTPLRMSKP	9	Unmodified	_VTPLRMSKP_					0	0	0		ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.5349304080009	3	343.535555	1027.58484	-2.0528	-0.0007052	0.47995	0.00016488	-1.5728	-0.00054032	343.5355899446851	26.141	0.88451	26.141	25.472	26.357	0					63	28	3	0	0	0	0.73881	1	10901	10901		5.7834	1.9071	1	3239800			40823	7528	19927	20010	47163	47163					0.07214679842149962
VTPLRMSKP	9	Unmodified	_VTPLRMSKP_					0	0	0		ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	343.5351745486259	3	343.535555	1027.58484	0.44264	0.00015206	-1.9097	-0.00065604	-1.467	-0.00050397	343.53463408501335	25.408	1.0984	25.66	25.335	26.434	0.25197					74	35	4	0	0	0	0.73881	1	10742	10742		5.7834	1.5939	1	4123700			40824	7528	19927	20010	47164	47164					0.07214679842149962
VTPLRMSKP	9	Unmodified	_VTPLRMSKP_					0	0	0		ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	ENST00000597451.5_1_19:18684168-18684498:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.5345947146416	3	343.535555	1027.58484	0.096531	3.3162E-05	-2.1584	-0.00074147	-2.0618	-0.00070831	343.5345872722628	24.026	0.87844	25.711	25.149	26.028	1.6845					54	24	4	0	0	0	0.73881	1	10062	10062		5.7834	1.5939	1	3909700			40825	7528	19927	20010	47165	47165					0.07214679842149962
VTPLSTVT	8	Unmodified	_VTPLSTVT_					0	0	0		tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	817.4712402224541	1	817.466561	816.459284	2.8093	0.0022965	2.8297	0.0023132	5.6391	0.0046097	817.4683871415186	106.2	0.12975	106.36	106.3	106.43	0.15781					12	6	3	0	0	0	0.89178	1	45442	45442		0.69038	0	1	18001000			40826	16958	19928	20011	47166	47166					0.04371291257575649
VTPLSTVT	8	Unmodified	_VTPLSTVT_					0	0	0		tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	817.466561	816.459284	1.2572	0.0010277	6.5335	0.0053409	7.7907	0.0063686	817.4719241926941	106.27	0.11575	106.27	106.21	106.33	0	-0.054399	0.0023127	NaN	0.69038	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4401000			40827	16958	19928	20011							0.04371291257575649
VTPLSTVT	8	Unmodified	_VTPLSTVT_					0	0	0		tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	tr|A0A7D6VUY9|A0A7D6VUY9_9CLOTPermeaseIICcomponentOS=ClostridiumintestinaleOX=36845GN=HZF06_03430PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	817.466561	816.459284	2.9542	0.0024149	3.2532	0.0026594	6.2073	0.0050743	817.4697746472933	106.17	0.12737	106.34	106.27	106.4	0.16174	0.013614	-0.00036878	NaN	0.69038	15	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14814000			40828	16958	19928	20011							0.04371291257575649
VTPLTFTKVS	10	Unmodified	_VTPLTFTKVS_					0	0	0		ENSG00000196611|ENST00000315274|MMP1	ENSG00000196611|ENST00000315274|MMP1	ENSG00000196611|ENST00000315274|MMP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.8196899294853	2	546.818607	1091.62266	2.989	0.0016344	-0.20849	-0.000114	2.7805	0.0015204	546.8183743206387	74.026	0.79856	75.823	75.347	76.146	1.7962					50	25	3	0	0	0	0.70618	1	31034	31034		18.146	0	1	9888200			40829	4952	19929	20012	47167	47167					0.08051469308611559
VTPPLPRQ	8	Unmodified	_VTPPLPRQ_					0	0	0			REV__ENST00000368366.5_1_1:155217575-155221373:-|nuORF	REV__ENST00000368366.5_1_1:155217575-155221373:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1823303103447	3	303.18351	906.528701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.848	1	99.848	99.348	100.35	0								0	0	0	1.0178	1	41798	41798		0.45834	0	1		+		40830	12635	19930	20013	47168	47168					0.07169794996991641
VTPQDVARI	9	Unmodified	_VTPQDVARI_					0	0	0		LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant;ENSG00000204020|ENST00000404459|LIPN	LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant	LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7866393923759	2	499.785099	997.555644	2.9639	0.0014813	1.032	0.00051577	3.9959	0.0019971	499.78540610696393	82.856	0.37251	84.069	83.826	84.199	1.2125					22	11	2	0	0	0	0.59203	1	34732	34732		11.64	1.4569	1	2180000			40831	5121	19931	20014	47169	47169					0.056768588175032164
VTPQDVARI	9	Unmodified	_VTPQDVARI_					0	0	0		LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant;ENSG00000204020|ENST00000404459|LIPN	LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant	LIPN|p.H373Sfs*20|1|0.09|ENSG00000204020|chr10:88778160-88778161|-/TT|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	499.785099	997.555644	2.9988	0.0014987	-1.0837	-0.00054162	1.9151	0.00095712	499.7844083093502	83.752	0.39479	84.022	83.832	84.227	0.27029	-0.095891	-0.001355	NaN	11.64	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1226900			40832	5121	19931	20014							0.056768588175032164
VTPQTTPTT	9	Unmodified	_VTPQTTPTT_					0	0	0		ENSG00000164168|ENST00000296582|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	ENSG00000164168|ENST00000296582|TMEM184C	MSMS	GG20161007_CRH_Patient100_W632_01	3	473.2490417361259	2	473.248015	944.481476	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.19	1	105.35	104.85	105.85	0.15859								0	0	0	0.42693	1	44748	44748		0	0	1				40833	3755	19932	20015	47170	47170					0.007014709353029502
VTPRLHFV	8	Unmodified	_VTPRLHFV_					0	0	0			REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	484.7859680056572	2	484.787444	967.560336	1.6779	0.00081345	-0.20435	-9.9066E-05	1.4736	0.00071438	484.78704296957153	26.151	0.32813	26.413	26.264	26.592	0.26173					24	10	3	0	0	0	0.88663	3	10902	10875;10902;10949		4.756	0	1	3512600	+		40834	9250	19933	20016	47171;47172;47173	47172					0.07525787750932977
VTPRLHFV	8	Unmodified	_VTPRLHFV_					0	0	0			REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	485.2881652712822	2	484.787444	967.560336	1.6779	0.00081345	-0.20435	-9.9066E-05	1.4736	0.00071438	484.78704296957153	26.151	0.32813	26.413	26.264	26.592	0.26173					24	10	3	0	0	0	2.3239	1	10875	10875		0.79363	0	1	3512600	+		40835	9250	19933	20016	47174	47174					0.07525787750932977
VTPRLHFV	8	Unmodified	_VTPRLHFV_					0	0	0			REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	REV__nc|ENSG00000108175|Q9ULJ6-3|ZMIZ1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7885619997978	2	484.787444	967.560336	1.4477	0.00070184	-0.12058	-5.8454E-05	1.3271	0.00064338	484.78730632566817	24.919	0.29984	26.179	26.046	26.346	1.2594					24	9	4	0	0	0	0.88663	1	10402	10402		4.756	0	1	3435400	+		40836	9250	19933	20016	47175	47175					0.07525787750932977
VTPRRHKSG	9	Unmodified	_VTPRRHKSG_					0	0	0			REV__ENSG00000145555|ENST00000513610|MYO10	REV__ENSG00000145555|ENST00000513610|MYO10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1037.600878894329	1	1037.59629	1036.58901	4.1513	0.0043074	0.42706	0.00044312	4.5784	0.0047505	1037.5964999805713	107.57	0.1674	107.73	107.64	107.81	0.15795					18	8	3	0	0	0	0.85019	1	46261	46261		0.52476	0	1	61897000	+		40837	10274	19934	20017	47176	47176					0.07217905380093725
VTPTKIDDI	9	Unmodified	_VTPTKIDDI_					0	0	0		nc|ENSG00000140199|Q9UHW9-3|SLC12A6;nc|ENSG00000140199|Q9UHW9-4|SLC12A6;ENSG00000140199|ENST00000354181|SLC12A6;SLC12A6|p.M255Ifs*61|1|0.11|ENSG00000140199|chr15:34255373-34255373|C/-|frameshift_variant	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	nc|ENSG00000140199|Q9UHW9-3|SLC12A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.2786132693291	2	501.279315	1000.54408	2.2968	0.0011514	-0.17293	-8.6687E-05	2.1239	0.0010647	501.27919205034345	61.662	0.63375	63.619	63.305	63.938	1.9571					34	19	2	0	0	0	0.34572	1	25866	25866		23.148	0	1	1248600			40838	2902	19935	20018	47177	47177					0.04382617003534506
VTPVLRGQPI	10	Unmodified	_VTPVLRGQPI_					0	0	0		ENST00000586944.5_1_19:797434-805231:+|nuORF;nc|ENSG00000011304|P26599-1|PTBP1;nc|ENSG00000011304|P26599-2|PTBP1;ENSG00000011304|ENST00000356948|PTBP1	ENST00000586944.5_1_19:797434-805231:+|nuORF	ENST00000586944.5_1_19:797434-805231:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	540.3319579958916	2	540.332216	1078.64988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.102	1	67.424	66.924	67.924	0.32269								0	0	0	0.65836	1	28091	28091		6.7232	0	1				40839	567	19936	20019	47178	47178					0.11369997639667417
VTQLTTQQVI	10	Unmodified	_VTQLTTQQVI_					0	0	0			REV__ENSG00000155754|ENST00000439140|C2CD6	REV__ENSG00000155754|ENST00000439140|C2CD6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	565.2843505740166	2	565.824421	1129.63429	1.6435	0.00092992	3.0304	0.0017147	4.6739	0.0026446	565.8262427934591	83.561	0.36952	85.199	85.01	85.38	1.6379					16	11	2	0	0	0	0.12357	1	35109	35109		21.537	3.3906	1	2341800	+		40840	10500	19937	20020	47179	47179					0.07465666331927423
VTQPLPVT	8	Unmodified	_VTQPLPVT_					0	0	0			REV__ENST00000398275.4_1_17:44273763-44273967:+|nuORF	REV__ENST00000398275.4_1_17:44273763-44273967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	427.7556030154228	2	427.752736	853.490919	2.2645	0.00096864	2.9203	0.0012492	5.1848	0.0022178	427.75386023056603	77.68	0.40826	77.997	77.826	78.234	0.31653					30	12	3	0	0	0	0.8909	1	32560	32560		2.0598	0	1	2674100	+		40841	12870	19938	20021	47180	47180					0.0583128401152635
VTQPLPVT	8	Unmodified	_VTQPLPVT_					0	0	0			REV__ENST00000398275.4_1_17:44273763-44273967:+|nuORF	REV__ENST00000398275.4_1_17:44273763-44273967:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	427.7546874880791	2	427.752736	853.490919	2.7857	0.0011916	3.339	0.0014283	6.1247	0.0026199	427.75369309965663	76.104	0.50023	77.872	77.627	78.127	1.7672					33	15	3	0	0	0	0.8909	1	31910	31910		2.0598	0	1	2331200	+		40842	12870	19938	20021	47181	47181					0.0583128401152635
VTQRIRLFRGR	11	Unmodified	_VTQRIRLFRGR_					0	0	0			REV__ENSG00000185129|ENST00000331327|PURA	REV__ENSG00000185129|ENST00000331327|PURA	MSMS	GG20161007_CRH_Patient100_W632_02	4	701.4282714724541	2	701.431119	1400.84768	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.694	1	97.95	97.45	98.45	0.25636								0	0	0	0.63775	1	41101	41101		5.2969	0.76802	1		+		40843	11451	19939	20022	47182	47182					0.1632943662211801
VTQRKAALS	9	Unmodified	_VTQRKAALS_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	487.2953979372978	2	487.293091	972.571629	3.0301	0.0014766	-0.017423	-8.4903E-06	3.0127	0.0014681	487.292767511273	73.444	0.59594	73.769	73.605	74.201	0.32494					27	18	2	0	0	0	0.71526	1	30765	30765		6.7232	1.4925	1	1350300	+		40844	11856	19940	20023	47183	47183					0.08424565054417599
VTQRKAALS	9	Unmodified	_VTQRKAALS_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	487.293091	972.571629	3.0301	0.0014766	-0.017423	-8.4903E-06	3.0127	0.0014681	487.292767511273	73.444	0.59594	73.769	73.605	74.201	0.32494	-0.079852	-0.00052911	NaN	6.7232	27	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1350300	+		40845	11856	19940	20023							0.08424565054417599
VTQRKAALS	9	Unmodified	_VTQRKAALS_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	487.293091	972.571629	3.2489	0.0015832	1.0737	0.00052322	4.3227	0.0021064	487.2935502505455	72.627	0.46631	73.957	73.822	74.288	1.3297	0.1083	0.00053431	NaN	6.7232	19	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1054500	+		40846	11856	19940	20023							0.08424565054417599
VTQRKAALS	9	Unmodified	_VTQRKAALS_					0	0	0			REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	REV__nc|ENSG00000214694|A8MVX0|ARHGEF33	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	487.293091	972.571629	2.7096	0.0013204	0.17317	8.4385E-05	2.8828	0.0014048	487.2933100485663	72.202	0.52048	74.012	73.801	74.321	1.8101	0.16324	-0.00034336	NaN	6.7232	20	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	930690	+		40847	11856	19940	20023							0.08424565054417599
VTQRRNRPLR	10	Unmodified	_VTQRRNRPLR_					0	0	0		sp|P16766|UL35_HCMVAProteinUL35OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL35PE=1SV=1;sp|F5HE12|UL35_HCMVMTegumentproteinUL35OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL35PE=3SV=1	sp|P16766|UL35_HCMVAProteinUL35OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL35PE=1SV=1	sp|P16766|UL35_HCMVAProteinUL35OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL35PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	648.3936035037041	2	648.391993	1294.76943	2.6227	0.0017005	-1.2848	-0.00083304	1.3379	0.00086749	648.3912599977409	95.843	0.30999	95.966	95.801	96.111	0.12331					24	10	3	0	0	0	0.89803	1	40148	40148		0.35063	0	1	11044000			40848	15978	19941	20024	47184	47184					0.13384004036925035
VTQSDSSSHF	10	Unmodified	_VTQSDSSSHF_					0	0	0			REV__ENSG00000109944|ENST00000227349|JHY	REV__ENSG00000109944|ENST00000227349|JHY	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	547.7413207888603	2	547.741085	1093.46762	2.5156	0.0013779	-0.53618	-0.00029369	1.9794	0.0010842	547.7403594434929	71.919	0.36536	73.743	73.539	73.904	1.8239					41	11	5	0	0	0	0.82019	1	30154	30154		10.074	0.6908	1	4144000	+		40849	9288	19942	20025	47185	47185					-0.07537806563755112
VTQSKDYAF	9	Unmodified	_VTQSKDYAF_					0	0	0			REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	REV__tr|A0A7D7A290|A0A7D7A290_9CLOTDiscoidindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07485PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.2957641482353	2	529.761289	1057.50803	3.1743	0.0016816	1.7432	0.0009235	4.9176	0.0026051	529.7631201481427	74.145	0.30318	75.941	75.748	76.051	1.7962					14	9	2	0	0	0	0.092938	1	31066	31066		27.629	2.2295	1	4760500	+		40850	15846	19943	20026	47186	47186					-0.018428401733444844
VTQSSRKLI	9	Unmodified	_VTQSSRKLI_					0	0	0		ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT	ENSG00000070748|ENST00000337653|CHAT	ENSG00000070748|ENST00000337653|CHAT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	516.3170654177666	2	516.314023	1030.61349	2.9532	0.0015248	1.2141	0.00062688	4.1674	0.0021517	516.3144397049704	82.97	0.68259	84.183	83.858	84.54	1.2125					75	21	5	0	0	0	0.66839	1	34752	34752		8.5933	0	1	62410000			40851	861	19944	20027	47187	47187					0.0994112074295117
VTQSSRKLI	9	Unmodified	_VTQSSRKLI_					0	0	0		ENSG00000070748|ENST00000337653|CHAT;nc|ENSG00000070748|P28329-3|CHAT;nc|ENSG00000070748|P28329-2|CHAT	ENSG00000070748|ENST00000337653|CHAT	ENSG00000070748|ENST00000337653|CHAT	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3168212771416	2	516.314023	1030.61349	2.9572	0.0015268	0.86407	0.00044613	3.8212	0.001973	516.3141782251407	82.671	0.55691	84.341	84.017	84.574	1.67					63	17	5	0	0	0	0.83213	1	34608	34608		2.0598	0	1	55490000			40852	861	19944	20027	47188	47188					0.0994112074295117
VTQVQRRRYHR	11	Unmodified	_VTQVQRRRYHR_					0	0	0		ENST00000524026.1_1_8:10692103-10697380:-|nuORF;ENST00000520018.2_1_8:10691012-10697347:-|nuORF	ENST00000524026.1_1_8:10692103-10697380:-|nuORF	ENST00000524026.1_1_8:10692103-10697380:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	750.0883666872978	2	749.926732	1497.83891	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.8	1	112.95	112.45	113.45	0.14912								0	0	0	0.63775	1	48856	48856		5.2969	0	1				40853	7077	19945	20028	47189	47189					0.10990462985682825
VTQYIAPPGI	10	Unmodified	_VTQYIAPPGI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7985107302666	2	529.797675	1057.5808	2.6897	0.001425	-0.62314	-0.00033014	2.0665	0.0010948	529.7975488147115	72.408	0.42659	73.738	73.486	73.913	1.3297					36	13	3	0	0	0	0.49886	2	30363	30363;30418		27.629	4.8925	1	3210100			40854	4793	19946	20029	47190;47191	47190					0.05430913620079991
VTQYIAPPGI	10	Unmodified	_VTQYIAPPGI_					0	0	0		nc|ENSG00000186472|Q9Y6V0-6|PCLO;ENSG00000186472|ENST00000333891|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	nc|ENSG00000186472|Q9Y6V0-6|PCLO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7991210818291	2	529.797675	1057.5808	2.712	0.0014368	-0.99077	-0.00052491	1.7213	0.00091192	529.7976971038219	71.916	0.42781	73.74	73.507	73.935	1.824					28	13	3	0	0	0	0.49886	1	30174	30174		27.629	0.74515	1	2808500			40855	4793	19946	20029	47192	47192					0.05430913620079991
VTQYSSNLF	9	Unmodified	_VTQYSSNLF_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.7643310427666	2	529.761289	1057.50803	3.1743	0.0016816	1.7432	0.0009235	4.9176	0.0026051	529.7631201481427	74.145	0.30318	75.941	75.748	76.051	1.7962					14	9	2	0	0	0	0.32838	1	31100	31100		24.021	0	1	4760500	+		40856	10799	19947	20030	47193	47193					-0.018428401733444844
VTQYSSNLF	9	Unmodified	_VTQYSSNLF_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	529.761289	1057.50803	1.9116	0.0010127	4.7774	0.0025309	6.689	0.0035436	529.7641000929098	76.077	0.3121	76.077	75.884	76.196	0	0.12146	0.0015067	NaN	24.021	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1594900	+		40857	10799	19947	20030							-0.018428401733444844
VTQYSSNLF	9	Unmodified	_VTQYSSNLF_					0	0	0			REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	REV__nc|ENSG00000165837|Q5W0A0-2|ERICH6B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	529.761289	1057.50803	2.5485	0.0013501	1.8295	0.00096922	4.378	0.0023193	529.7633146234136	75.618	0.33854	75.94	75.742	76.081	0.32163	-0.015123	-0.0016166	NaN	24.021	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2078200	+		40858	10799	19947	20030							-0.018428401733444844
VTQYYMGIL	9	Unmodified	_VTQYYMGIL_					0	0	0			REV__tr|A0A7D6W1L8|A0A7D6W1L8_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03195PE=3SV=1	REV__tr|A0A7D6W1L8|A0A7D6W1L8_9CLOTAminoacidABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03195PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7827026247978	2	544.27826	1086.54197	3.3385	0.0018171	3.1123	0.001694	6.4508	0.003511	544.7824565981023	81.312	0.49252	83.008	82.766	83.258	1.6959					48	15	4	0	0	0	0.46905	1	34112	34112		16.942	0	1	5824900	+		40859	15592	19948	20031	47194	47194					0.002158649940838586
VTRALKKML	9	Unmodified	_VTRALKKML_					0	0	0		ENSG00000184022|ENST00000642090|OR2T10	ENSG00000184022|ENST00000642090|OR2T10	ENSG00000184022|ENST00000642090|OR2T10	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	354.0396301150322	3	353.895083	1058.66342	1.964	0.00069505	0.26139	9.2506E-05	2.2254	0.00078755	353.8945346979153	47.867	0.8013	49.842	49.526	50.327	1.976					36	25	2	0	0	0	0.11954	1	20161	20161		0.26902	0	1	1400900			40860	4678	19949	20032	47195	47195					0.13643532147239057
VTRHRRKKRK	10	Unmodified	_VTRHRRKKRK_					0	0	0			REV__nc|ENSG00000100987|Q9NZR4-6|VSX1	REV__nc|ENSG00000100987|Q9NZR4-6|VSX1	MSMS	GG20161007_CRH_Patient100_W632_02	4	682.9453613162041	2	682.944728	1363.8749	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.19	1	102.38	101.88	102.88	0.19076								0	0	0	0.66166	1	42974	42974		1.6526	0.32309	1		+		40861	9017	19950	20033	47196	47196					0.20751964953183233
VTRHRRKSRS	10	Unmodified	_VTRHRRKSRS_					0	0	0			REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8855468630791	2	641.881793	1281.74903	2.0667	0.0013266	0.92569	0.00059419	2.9924	0.0019208	641.8822617428297	78.111	0.63029	78.111	77.811	78.441	0					31	19	2	0	0	0	0.89803	1	32461	32461		1.4819	0.28856	1	1347600	+		40862	11105	19951	20034	47197	47197					0.11942833377111128
VTRHRRKSRS	10	Unmodified	_VTRHRRKSRS_					0	0	0			REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8829833865166	2	641.881793	1281.74903	2.3142	0.0014855	0.031104	1.9965E-05	2.3453	0.0015054	641.8816743639243	81.488	2.5309	81.488	80.697	83.228	0					216	82	4	0	0	0	0.89803	1	33987	33987		1.4819	0	1	10103000	+		40863	11105	19951	20034	47198	47198					0.11942833377111128
VTRHRRKSRS	10	Unmodified	_VTRHRRKSRS_					0	0	0			REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8835937380791	2	641.881793	1281.74903	2.4082	0.0015458	1.3503	0.0008667	3.7584	0.0024125	641.8824396814736	80.494	2.5868	81.745	80.895	83.481	1.2512					162	83	2	0	0	0	0.89803	1	33789	33789		1.4819	0	1	10623000	+		40864	11105	19951	20034	47199	47199					0.11942833377111128
VTRHRRKSRS	10	Unmodified	_VTRHRRKSRS_					0	0	0			REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	641.881793	1281.74903	1.7816	0.0011436	2.3089	0.0014821	4.0906	0.0026257	641.8835233391707	77.945	0.50996	78.254	77.943	78.453	0.30932	0.037861	0.00057136	NaN	1.4819	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1183000	+		40865	11105	19951	20034							0.11942833377111128
VTRHRRKSRS	10	Unmodified	_VTRHRRKSRS_					0	0	0			REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	REV__XCR1|p.H300Rfs*28|1|0.14|ENSG00000173578|chr3:46021048-46021049|AT/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	641.881793	1281.74903	2.1403	0.0013738	4.2359	0.0027189	6.3762	0.0040928	641.8845914194391	77.003	0.25335	78.284	78.124	78.378	1.2809	0.067615	0.0030451	NaN	1.4819	15	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	771990	+		40866	11105	19951	20034							0.11942833377111128
VTRKLLLEKRY	11	Unmodified	_VTRKLLLEKRY_					0	0	0			REV__ENSG00000100865|ENST00000216756|CINP	REV__ENSG00000100865|ENST00000216756|CINP	MSMS	GG20161007_CRH_Patient100_W632_02	4	709.8261596560478	2	709.945736	1417.87692	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.69	1	117.84	117.34	118.34	0.15606								0	0	0	0.63775	1	50826	50826		1.3295	0	1		+		40867	9010	19952	20035	47200	47200					0.1846953612780453
VTRLGLSMV	9	Unmodified	_VTRLGLSMV_					0	0	0		nc|ENSG00000108406|Q8IX18-4|DHX40;nc|ENSG00000108406|Q8IX18-3|DHX40;nc|ENSG00000108406|Q8IX18-2|DHX40;ENSG00000108406|ENST00000251241|DHX40;ENST00000587125.1_1_17:58040633-58079710:-|nuORF	nc|ENSG00000108406|Q8IX18-4|DHX40	nc|ENSG00000108406|Q8IX18-4|DHX40	MSMS	GG20161007_CRH_Patient100_W632_01	3	488.2886535525322	2	488.28642	974.558287	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.129	1	51.52	51.02	52.02	1.3911								0	0	0	0.41514	1	20982	20982		7.2892	0	1				40868	1634	19953	20036	47201	47201					0.06998990950819461
VTRLRFKLKD	10	Unmodified	_VTRLRFKLKD_					0	0	0		tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1;tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1;tr|A0A553SSQ2|A0A553SSQ2_NIACIPTSbeta-glucosidetransportersubunitEIIBCAOS=NialliacirculansOX=1397GN=CEQ21_03500PE=4SV=1	tr|A0A553SJ57|A0A553SJ57_NIACIProtein-N(Pi)-phosphohistidine--sugarphosphotransferaseOS=NialliacirculansOX=1397GN=CEQ21_16155PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	638.3995849490166	2	638.398422	1274.78229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.989	1	46.989	46.489	47.489	0								0	0	0	0.66237	1	19637	19637		0.45834	0	1				40869	16230;16624	19954	20037	47202	47202					0.15589022376434514
VTRQLVRS	8	Unmodified	_VTRQLVRS_					0	0	0			REV__ENSG00000140093|ENST00000261994|SERPINA10	REV__ENSG00000140093|ENST00000261994|SERPINA10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	479.7942077517509	2	479.793258	957.571963	3.1858	0.0015285	-1.1034	-0.0005294	2.0824	0.00099913	479.79258500155885	75.659	1.2408	75.981	75.55	76.791	0.32163					82	39	3	0	0	0	0.89051	1	31607	31607		2.3027	0	1	3050500	+		40870	10117	19955	20038	47203	47203					0.0914798477426757
VTRRPRPR	8	Unmodified	_VTRRPRPR_					0	0	0		ENST00000456496.6_1_7:149575832-149576763:+|nuORF	ENST00000456496.6_1_7:149575832-149576763:+|nuORF	ENST00000456496.6_1_7:149575832-149576763:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	519.1370727419853	2	519.325591	1036.63663	2.0027	0.0010401	-1.2247	-0.00063604	0.778	0.00040403	519.3248627321417	78.617	1.0802	78.617	78.064	79.144	0					73	34	3	0	0	0	2.3239	1	32915	32915		0.69038	0	1	2420200			40871	6643	19956	20039	47204	47204					0.11977604370940753
VTRRPRPR	8	Unmodified	_VTRRPRPR_					0	0	0		ENST00000456496.6_1_7:149575832-149576763:+|nuORF	ENST00000456496.6_1_7:149575832-149576763:+|nuORF	ENST00000456496.6_1_7:149575832-149576763:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	519.325591	1036.63663	1.9398	0.0010074	-0.53666	-0.0002787	1.4031	0.00072867	519.3253845514915	78.314	0.91235	78.624	78.196	79.108	0.30933	0.0034116	0.00037782	NaN	0.69038	69	28	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2507500			40872	6643	19956	20039							0.11977604370940753
VTRRRIRRTVR	11	Unmodified	_VTRRRIRRTVR_					0	0	0		JAK3|p.T323Ffs*2|1|0.2|ENSG00000105639|chr19:17841646-17841658|CTGGTTGTCTGTC/-|frameshift_variant;ENST00000526008.5_1_19:17949989-17958765:-|nuORF;nc|ENSG00000105639|P52333-4|JAK3;ENST00000527031.5_1_19:17947866-17955268:-|nuORF;nc|ENSG00000105639|P52333-2|JAK3;ENSG00000105639|ENST00000458235|JAK3	JAK3|p.T323Ffs*2|1|0.2|ENSG00000105639|chr19:17841646-17841658|CTGGTTGTCTGTC/-|frameshift_variant	JAK3|p.T323Ffs*2|1|0.2|ENSG00000105639|chr19:17841646-17841658|CTGGTTGTCTGTC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	734.9727661013603	2	734.974016	1467.93348	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.91	1	98.138	97.638	98.638	0.22776								0	0	0	0.63775	1	41206	41206		1.3295	0	1				40873	1528	19957	20040	47205	47205					0.21823021527643505
VTRRRQLF	8	Unmodified	_VTRRRQLF_					0	0	0		ENST00000546265.1_1_12:11199669-11273613:-|nuORF	ENST00000546265.1_1_12:11199669-11273613:-|nuORF	ENST00000546265.1_1_12:11199669-11273613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.3286620974541	2	538.327799	1074.64105	2.6193	0.0014101	-1.3507	-0.00072713	1.2686	0.00068294	538.3269606988542	86.013	0.60841	86.265	86.006	86.614	0.25227					74	19	5	0	0	0	0.89185	1	36051	36051		0.79363	0	1	131330000			40874	7241	19958	20041	47206	47206					0.1067106879381754
VTRRYALLRRQ	11	Unmodified	_VTRRYALLRRQ_					0	0	0			REV__ENST00000543090.5_1_11:118955747-118959384:+|nuORF	REV__ENST00000543090.5_1_11:118955747-118959384:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	716.4376708865166	2	716.436401	1430.85825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.95	1	87.95	87.45	88.45	0								0	0	0	0.63775	1	36764	36764		1.0715	0.72083	1		+		40875	13793	19959	20042	47207	47207					0.16005419276575594
VTRSKKWL	8	Unmodified	_VTRSKKWL_					0	0	0			REV__ENSG00000130349|ENST00000311381|MTRES1	REV__ENSG00000130349|ENST00000311381|MTRES1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	509.2829162478447	2	509.313826	1016.6131	2.9777	0.0015166	-2.2022	-0.0011216	0.77555	0.000395	509.312373936103	76.229	0.40913	77.996	77.813	78.222	1.7672					27	12	3	0	0	0	2.3239	1	31923	31923		10.183	0	1	1550000	+		40876	9783	19960	20043	47208	47208					0.10545745813737994
VTRSKRLT	8	Unmodified	_VTRSKRLT_					0	0	0			REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.8013488650322	2	480.801083	959.587613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.074	1	79.074	78.574	79.574	0								0	0	0	1.0178	1	32921	32921		0	0	1		+		40877	15178	19961	20044	47209	47209					0.1062027129131593
VTRSKRLT	8	Unmodified	_VTRSKRLT_					0	0	0			REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	480.8019286990166	2	480.801083	959.587613	2.4865	0.0011955	-1.2638	-0.00060765	1.2227	0.00058786	480.80054811015805	78.785	1.372	79.095	78.674	80.046	0.30933					109	43	5	0	0	0	0.89198	1	33031	33031		0	0	1	268820000	+		40878	15178	19961	20044	47210	47210					0.1062027129131593
VTRSKRLT	8	Unmodified	_VTRSKRLT_					0	0	0			REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	REV__tr|A0A553SRX6|A0A553SRX6_NIACISensorhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_02035PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	480.8020202517509	2	480.801083	959.587613	2.5977	0.001249	-0.36557	-0.00017577	2.2321	0.0010732	480.8008987539437	77.933	0.82516	79.213	78.823	79.649	1.2809					89	26	6	0	0	0	0.89198	4	32622	32622;32669;32708;32747		0	0	1	134790000	+		40879	15178	19961	20044	47211;47212;47213;47214	47211					0.1062027129131593
VTRSQPSSML	10	Unmodified	_VTRSQPSSML_					0	0	0			REV__nc|ENSG00000132952|Q5W0Q7-2|USPL1	REV__nc|ENSG00000132952|Q5W0Q7-2|USPL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.2893554568291	2	553.287148	1104.55974	2.7804	0.0015384	2.0587	0.0011391	4.8391	0.0026774	553.288476659836	74.634	0.44377	76.415	76.131	76.575	1.7817					27	13	3	0	0	0	0.75645	1	31319	31319		15.847	1.0089	1	3737900	+		40880	9865	19962	20045	47215	47215					0.011645802489283597
VTRTVTGLTK	10	Unmodified	_VTRTVTGLTK_					0	0	0			REV__ENST00000601803.5_1_19:19032626-19032992:+|nuORF	REV__ENST00000601803.5_1_19:19032626-19032992:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3286620974541	2	538.327131	1074.63971	2.518	0.0013555	-0.14915	-8.029E-05	2.3689	0.0012752	538.3270153260037	86.206	0.66693	86.206	85.945	86.612	0					77	21	5	0	0	0	0.89803	1	35896	35896		0	0	1	163540000	+		40881	14117	19963	20046	47216	47216					0.10537389914384221
VTRWRTRFRIE	11	Unmodified	_VTRWRTRFRIE_					0	0	0		nc|ENSG00000131269|O75027-3|ABCB7;ENSG00000131269|ENST00000373394|ABCB7;nc|ENSG00000131269|O75027-2|ABCB7	nc|ENSG00000131269|O75027-3|ABCB7	nc|ENSG00000131269|O75027-3|ABCB7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	760.4339477419853	2	760.433858	1518.85316	1.7563	0.0013356	-0.36403	-0.00027682	1.3923	0.0010587	760.9346965508531	39.089	0.2509	39.089	38.953	39.204	0					15	7	3	0	0	0	1.0362	1	16373	16373		1.3295	0	1	1013300			40882	2485	19964	20047	47217	47217					0.11449115413961408
VTSAIVVIT	9	Unmodified	_VTSAIVVIT_					0	0	0		ENSG00000121900|ENST00000373463|TMEM54	ENSG00000121900|ENST00000373463|TMEM54	ENSG00000121900|ENST00000373463|TMEM54	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	902.5596191287041	1	902.55571	901.548434	1.6252	0.0014668	-0.4375	-0.00039487	1.1877	0.0010719	902.5551105456873	66.562	0.35198	66.562	66.415	66.767	0					22	10	3	0	0	0	0.10294	1	27707	27707		48.346	12.302	1	1378200			40883	2144	19965	20048	47218	47218					0.09372126217078858
VTSAIVVIT	9	Unmodified	_VTSAIVVIT_					0	0	0		ENSG00000121900|ENST00000373463|TMEM54	ENSG00000121900|ENST00000373463|TMEM54	ENSG00000121900|ENST00000373463|TMEM54	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	902.5582763552666	1	902.55571	901.548434	1.997	0.0018024	0.4151	0.00037465	2.4121	0.002177	902.5557255174388	66.155	0.31718	66.479	66.305	66.622	0.32449					17	9	2	0	0	0	0.083604	1	27732	27732		54.774	12.679	1	1458700			40884	2144	19965	20048	47219	47219					0.09372126217078858
VTSAKGQKR	9	Unmodified	_VTSAKGQKR_					0	0	0			REV__ENSG00000138095|ENST00000260665|LRPPRC	REV__ENSG00000138095|ENST00000260665|LRPPRC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7926513552666	2	487.790715	973.566878	2.6512	0.0012932	1.3806	0.00067344	4.0318	0.0019667	487.79142141632246	63.374	1.9768	64.787	64.045	66.022	1.4134					86	63	2	0	0	0	0.6486	1	26375	26375		9.3831	1.473	1	1312000	+		40885	10042	19966	20049	47220	47220					0.07903680911658739
VTSILAKK	8	Unmodified	_VTSILAKK_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	430.2836486697197	2	430.284203	858.553853	1.333	0.00057358	-3.558	-0.0015309	-2.225	-0.00095737	430.2826103393596	81.395	0.3868	81.395	81.226	81.613	0					21	12	2	0	0	0	0.89178	1	33888	33888		0.69038	0	1	3974600			40886	2792	19967	20050	47221	47221					0.11891849799553711
VTSILAKK	8	Unmodified	_VTSILAKK_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	430.2839538455009	2	430.284203	858.553853	2.6935	0.001159	-2.2241	-0.00095699	0.46944	0.00020199	430.28311951217785	80.309	0.40501	81.56	81.324	81.729	1.2512					24	12	3	0	0	0	0.89008	1	33699	33699		2.5775	0	1	1755600			40887	2792	19967	20050	47222	47222					0.11891849799553711
VTSILAKK	8	Unmodified	_VTSILAKK_					0	0	0		ENST00000560523.5_1_15:70964229-70991966:-|nuORF;nc|ENSG00000137831|Q9BZF9-2|UACA;ENSG00000137831|ENST00000322954|UACA	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	ENST00000560523.5_1_15:70964229-70991966:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	430.284203	858.553853	2.3927	0.0010295	-3.5058	-0.0015085	-1.1131	-0.00047893	430.28269559589586	81.287	0.42446	81.578	81.276	81.701	0.29056	0.0324	-0.00077498	NaN	2.5775	32	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2940000			40888	2792	19967	20050							0.11891849799553711
VTSKIFFF	8	Unmodified	_VTSKIFFF_					0	0	0			REV__ENST00000395246.5_1_5:130599842-130695031:+|nuORF	REV__ENST00000395246.5_1_5:130599842-130695031:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	988.4717895388603	1	988.550231	987.542954	3.4284	0.0033891	1.3606	0.0013451	4.789	0.0047342	988.5510629225998	73.815	0.27198	75.612	75.536	75.808	1.7962					11	8	2	0	0	0	2.3239	1	30942	30942		15.768	0	1	1326100	+		40889	12837	19968	20051	47223	47223					0.048684474252809196
VTSLEPDR	8	Unmodified	_VTSLEPDR_					0	0	0			REV__ENST00000590539.1_1_17:33734386-33734668:-|nuORF	REV__ENST00000590539.1_1_17:33734386-33734668:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	459.1722289919853	2	458.740357	915.46616	0.40201	0.00018442	-2.0909	-0.00095917	-1.6889	-0.00077475	458.740282348337	13.62	0.31958	14.448	14.166	14.485	0.82789					12	10	2	0	0	0	2.3239	1	5628	5628		5.2307	0	1	372620	+		40890	10954	19969	20052	47224	47224					0.00504604138131981
VTSRLITP	8	Unmodified	_VTSRLITP_					0	0	0			REV__nc|ENSG00000197658|Q8N4F4-3|SLC22A24	REV__nc|ENSG00000197658|Q8N4F4-3|SLC22A24	MSMS	GG20161007_CRH_Patient100_A02_02	2	443.7732116580009	2	443.77146	885.528367	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.53	1	104.59	104.09	105.09	0.056801								0	0	0	1.0178	1	44104	44104		4.3292	0	1		+		40891	11686	19970	20053	47225	47225					0.08102375277132978
VTSRTVDTV	9	Unmodified	_VTSRTVDTV_					0	0	0			REV__ENSG00000155657|ENST00000589042|TTN	REV__ENSG00000155657|ENST00000589042|TTN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	488.7664367556572	2	489.266739	976.518924	1.9429	0.00095057	-1.9406	-0.00094945	0.0022969	1.1238E-06	489.2672585147422	79.171	0.68049	80.906	80.567	81.247	1.735					50	21	3	0	0	0	0.11071	1	33260	33260		6.7232	0	1	1230300	+		40892	10496	19971	20054	47226	47226					0.02972562200966422
VTSTVELGKSF	11	Unmodified	_VTSTVELGKSF_					0	0	0			REV__ENSG00000153404|ENST00000637938|PLEKHG4B	REV__ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3164550662041	2	584.316428	1166.6183	0.66817	0.00039042	-1.9484	-0.0011385	-1.2803	-0.00074807	584.315583341679	53.128	0.29748	55.098	54.997	55.295	1.9697					30	13	3	0	0	0	0.74096	1	22256	22256		17.113	3.2068	1	5596300	+		40893	10453	19972	20055	47227	47227					0.04165960095042465
VTSTVELGKSF	11	Unmodified	_VTSTVELGKSF_					0	0	0			REV__ENSG00000153404|ENST00000637938|PLEKHG4B	REV__ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	584.316428	1166.6183	1.8893	0.0011039	-1.1838	-0.0006917	0.70548	0.00041222	584.3163306814344	54.818	0.33045	55.139	54.989	55.32	0.32088	-0.017447	0.0010294	NaN	17.113	23	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2859800	+		40894	10453	19972	20055							0.04165960095042465
VTTDIQVKV	9	Unmodified	_VTTDIQVKV_					0	0	0		ENST00000599335.5_1_19:39959399-39965382:+|nuORF;nc|ENSG00000196235|O00267-2|SUPT5H;ENSG00000196235|ENST00000432763|SUPT5H	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	ENST00000599335.5_1_19:39959399-39965382:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.7949401736259	2	501.795132	1001.57571	0.5826	0.00029234	-1.4448	-0.00072501	-0.86223	-0.00043266	501.79429031674607	31.112	0.15052	32.936	32.865	33.016	1.8246					6	4	2	0	0	0	0.28372	1	13041	13041		26.268	7.0112	1	743810			40895	4927	19973	20056	47228	47228					0.07498609757465147
VTTISLLLLA	10	Unmodified	_VTTISLLLLA_					0	0	0		ENST00000250457.7_1_14:34394881-34395019:-|nuORF	ENST00000250457.7_1_14:34394881-34395019:-|nuORF	ENST00000250457.7_1_14:34394881-34395019:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.3403198122978	2	522.339175	1042.6638	2.9216	0.0015261	0.33915	0.00017715	3.2607	0.0017032	522.3393026789029	107.58	0.27153	107.63	107.48	107.75	0.052452					59	13	7	0	0	0	0.89803	1	46090	46090		0	0	1	465420000			40896	5582	19974	20057	47229	47229					0.14417230348112753
VTTPTEVPR	9	Unmodified	_VTTPTEVPR_					0	0	0			REV__ENSG00000138379|ENST00000260950|MSTN	REV__ENSG00000138379|ENST00000260950|MSTN	MSMS	GG20161007_CRH_Patient100_W632_01	3	500.2791625857353	2	500.277106	998.53966	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.812	1	34.09	33.59	34.59	1.2782								0	0	0	0.42089	1	13761	13761		6.7232	0	1		+		40897	10060	19975	20058	47230	47230					0.040331525806209356
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	974.5788452029228	1	974.576839	973.569563	1.6728	0.0016303	0.29649	0.00028895	1.9693	0.0019192	974.5772229813879	66.816	0.50768	66.816	66.608	67.116	0					34	15	3	0	0	0	0.09539	1	27891	27891		50.855	0	1	3509700	+		40898	10572	19976	20059	47231	47231					0.08172091525955238
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	974.5792114138603	1	974.576839	973.569563	1.9618	0.0019119	-0.043974	-4.2856E-05	1.9178	0.0018691	974.5766166028416	66.409	0.60065	66.733	66.495	67.096	0.32449					40	18	3	0	0	0	0.051699	2	27831	27831;27887		67.344	0	1	2625700	+		40899	10572	19976	20059	47232;47233	47232					0.08172091525955238
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5809814333916	1	974.576839	973.569563	2.9682	0.0028928	1.3795	0.0013445	4.3477	0.0042372	974.5782196180238	65.157	0.47177	66.556	66.316	66.788	1.3989					39	14	3	0	0	0	0.031324	2	27329	27279;27329		85.357	0	1	8905900	+		40900	10572	19976	20059	47234;47235	47235					0.08172091525955238
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	487.7939941287041	2	487.792058	973.569563	3.0861	0.0015054	0.018585	9.0656E-06	3.1046	0.0015144	487.79208248034735	65.209	0.80963	66.608	66.255	67.064	1.3989					54	25	3	0	0	0	0.006164	1	27386	27386		117.6	0	1	8079200	+		40901	10572	19976	20059	47236	47236					0.08172091525955238
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5799438357353	1	974.576839	973.569563	1.7353	0.0016912	1.3455	0.0013113	3.0808	0.0030025	974.5782424167406	64.765	0.81795	66.693	66.389	67.207	1.928					54	25	3	0	0	0	0.026628	3	27097	27097;27146;27198		92.822	0	1	6305100	+		40902	10572	19976	20059	47237;47238;47239	47237					0.08172091525955238
VTTTIVLDI	9	Unmodified	_VTTTIVLDI_					0	0	0			REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	REV__ENST00000466561.1_1_1:17313027-17318334:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.7929870486259	2	487.792058	973.569563	1.9299	0.00094137	-0.66908	-0.00032637	1.2608	0.000615	487.79184238276537	64.734	0.63179	66.662	66.325	66.957	1.928					52	19	4	0	0	0	0.006164	1	27191	27191		117.6	0	1	10822000	+		40903	10572	19976	20059	47240	47240					0.08172091525955238
VTTVIRRNPF	10	Unmodified	_VTTVIRRNPF_					0	0	0			REV__ENSG00000188649|ENST00000646931|CC2D2B	REV__ENSG00000188649|ENST00000646931|CC2D2B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1801025271416	3	401.571657	1201.69314	1.9022	0.00076388	-1.4939	-0.00059992	0.4083	0.00016396	401.5711228759991	39.882	0.39779	41.192	41.023	41.421	1.3102					43	12	5	0	0	0	0.12556	1	16796	16796		0.69767	0	1	68019000	+		40904	11577	19977	20060	47241	47241					0.10036187416926623
VTVAEWVKK	9	Unmodified	_VTVAEWVKK_					0	0	0		tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.9883300662041	2	530.313492	1058.61243	1.879	0.00099644	-2.2619	-0.0011995	-0.38296	-0.00020309	530.3120421965453	94.259	0.43279	94.259	93.963	94.396	0					22	13	2	0	0	0	0.11833	1	39335	39335		0.45834	0	1	1368000			40905	16374	19978	20061	47242	47242					0.08546906374044738
VTVAEWVKK	9	Unmodified	_VTVAEWVKK_					0	0	0		tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	tr|A0A553SMD5|A0A553SMD5_NIACINAD(P)H:quinoneoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_22290PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	530.313492	1058.61243	2.811	0.0014907	-2.2377	-0.0011867	0.57331	0.00030404	530.3123204035804	94.004	0.41388	94.149	93.973	94.387	0.14493	-0.081077	0.00075508	NaN	0.45834	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1636800			40906	16374	19978	20061							0.08546906374044738
VTVAHLRPV	9	Unmodified	_VTVAHLRPV_					0	0	0		ENST00000548225.1_1_12:56604079-56607800:-|nuORF;ENSG00000181852|ENST00000345093|RNF41	ENST00000548225.1_1_12:56604079-56607800:-|nuORF	ENST00000548225.1_1_12:56604079-56607800:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	496.3065368533134	2	496.306001	990.597449	2.5564	0.0012688	-2.2713	-0.0011273	0.28513	0.00014151	496.304918501009	66.334	0.9093	66.659	66.432	67.341	0.32449					45	28	3	0	0	0	0.59203	1	27803	27803		11.64	2.2929	1	1712200			40907	4588	19979	20062	47243	47243					0.10177459296698999
VTVAVERIL	9	Unmodified	_VTVAVERIL_					0	0	0			REV__ENST00000515213.1_1_7:419399-420934:+|nuORF	REV__ENST00000515213.1_1_7:419399-420934:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.3123351931572	2	500.313492	998.612431	1.4922	0.00074658	0.22163	0.00011088	1.7139	0.00085746	500.3134663813848	69.058	1.6268	69.058	68.737	70.364	0					123	51	5	0	0	0	0.39927	1	29068	29068		20.454	0	1	53096000	+		40908	13595	19980	20063	47244	47244					0.11306906374034043
VTVDEVVTL	9	Unmodified	_VTVDEVVTL_					0	0	0			REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.5410644412041	1	974.540454	973.533177	1.9524	0.0019027	-0.58532	-0.00057042	1.3671	0.0013323	974.5387736062523	69	0.64935	70.366	69.936	70.585	1.3657					38	20	2	0	0	0	0.059546	1	28942	28942		64.236	0	1	3669500	+		40909	9002	19981	20064	47245	47245					0.04535214629231632
VTVDEVVTL	9	Unmodified	_VTVDEVVTL_					0	0	0			REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	974.5419189333916	1	974.540454	973.533177	1.6837	0.0016408	-1.7472	-0.0017027	-0.063467	-6.1851E-05	974.5367609908621	68.509	0.71609	70.362	69.932	70.648	1.853					40	22	2	0	0	0	0.042029	2	28694	28694;28747		74.423	0	1	2735600	+		40910	9002	19981	20064	47246;47247	47246					0.04535214629231632
VTVDEVVTL	9	Unmodified	_VTVDEVVTL_					0	0	0			REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	974.540454	973.533177	1.298	0.0012649	-0.7601	-0.00074075	0.53788	0.00052419	974.539161415366	70.012	0.53345	70.334	69.94	70.474	0.32224	-0.046593	0.00077918	NaN	74.423	25	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	752080	+		40911	9002	19981	20064							0.04535214629231632
VTVDEVVTL	9	Unmodified	_VTVDEVVTL_					0	0	0			REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	REV__ENST00000554757.1_1_14:104198706-104199352:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	974.540454	973.533177	1.6837	0.0016408	-1.7472	-0.0017027	-0.063467	-6.1851E-05	974.5367609908621	68.509	0.71609	70.362	69.932	70.648	1.853	-0.019125	-0.00018275	NaN	74.423	40	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2735600	+		40912	9002	19981	20064							0.04535214629231632
VTVFLHFL	8	Unmodified	_VTVFLHFL_					0	0	0		nc|ENSG00000125257|O15439-3|ABCC4;nc|ENSG00000125257|O15439-2|ABCC4;ENSG00000125257|ENST00000645237|ABCC4;nc|ENSG00000125257|O15439-4|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	nc|ENSG00000125257|O15439-3|ABCC4	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2884399294853	2	488.286746	974.558939	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.269	1	90.478	89.978	90.978	0.20904								0	0	0	1.0178	1	37824	37824		5.7604	0	1				40913	2252	19982	20065	47248	47248					0.07064153662179251
VTVLCKNTF	9	Unmodified	_VTVLCKNTF_					0	0	0		ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	ENST00000531894.5_1_16:70011782-70023933:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	512.7806274294853	2	512.778428	1023.5423	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.062	1	47.022	46.522	47.522	1.9596								0	0	0	0.16797	1	18882	18882		28.487	5.3384	1				40914	7173	19983	20066	47249	47249					0.03147284713918452
VTVPPVFSV	9	Unmodified	_VTVPPVFSV_					0	0	0			REV__ENST00000525715.5_1_11:1244314-1260349:+|nuORF	REV__ENST00000525715.5_1_11:1244314-1260349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	472.7768127322197	2	472.776211	943.537869	2.1675	0.0010247	-0.012276	-5.8038E-06	2.1552	0.0010189	472.77609070662066	66.134	1.1301	67.523	67.054	68.184	1.3887					81	36	3	0	0	0	0.24063	1	27916	27916		28.487	0	1	4527200	+		40915	9510	19984	20067	47250	47250					0.06384143562661393
VTVPPVFSV	9	Unmodified	_VTVPPVFSV_					0	0	0			REV__ENST00000525715.5_1_11:1244314-1260349:+|nuORF	REV__ENST00000525715.5_1_11:1244314-1260349:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	472.7768737673759	2	472.776211	943.537869	2.0546	0.00097135	0.23981	0.00011338	2.2944	0.0010847	472.7759437032919	65.775	1.4219	67.684	66.907	68.329	1.9085					108	45	3	0	0	0	0.09539	1	27478	27478		50.855	0	1	5188500	+		40916	9510	19984	20067	47251	47251					0.06384143562661393
VTVRPARN	8	Unmodified	_VTVRPARN_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.7736083865166	2	456.772326	911.530098	2.965	0.0013543	0.39294	0.00017948	3.3579	0.0015338	456.77228649603853	70.973	0.48708	72.314	72.054	72.541	1.3415					37	15	3	0	0	0	0.8873	1	29815	29815		4.3292	0	1	10062000	+		40917	10590	19985	20068	47252	47252					0.07079429085740685
VTVRPARN	8	Unmodified	_VTVRPARN_					0	0	0			REV__ENSG00000160194|ENST00000354250|NDUFV3	REV__ENSG00000160194|ENST00000354250|NDUFV3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.7724182009697	2	456.772326	911.530098	1.4838	0.00067776	0.62292	0.00028453	2.1067	0.00096229	456.7724436163955	70.619	0.54469	72.457	72.198	72.742	1.8378					46	17	4	0	0	0	0.8873	1	29589	29589		4.3292	0	1	10109000	+		40918	10590	19985	20068	47253	47253					0.07079429085740685
VTVVQLLR	8	Unmodified	_VTVVQLLR_					0	0	0		GAPDHS|p.T259Sfs*103|1|0.07|ENSG00000105679|chr19:35543373-35543374|-/GCTTTGCAGGGCAGCCCATTCATTCATT|frameshift_variant;ENSG00000105679|ENST00000222286|GAPDHS	GAPDHS|p.T259Sfs*103|1|0.07|ENSG00000105679|chr19:35543373-35543374|-/GCTTTGCAGGGCAGCCCATTCATTCATT|frameshift_variant	GAPDHS|p.T259Sfs*103|1|0.07|ENSG00000105679|chr19:35543373-35543374|-/GCTTTGCAGGGCAGCCCATTCATTCATT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	465.1228210330009	2	464.302927	926.591301	2.1468	0.00099677	1.2934	0.00060053	3.4402	0.0015973	464.3039915568934	56.853	0.25507	56.853	56.725	56.98	0					12	8	2	0	0	0	2.3239	1	23713	23713		2.5775	0	1	1108200			40919	1535	19986	20069	47254	47254					0.12506941065191768
VTVWKKEWKRV	11	Unmodified	_VTVWKKEWKRV_					0	0	0			REV__BCL7A|p.S97Pfs*4|1|0.14|ENSG00000110987|chr12:122043902-122043903|-/CCAAAGTGTT|frameshift_variant	REV__BCL7A|p.S97Pfs*4|1|0.14|ENSG00000110987|chr12:122043902-122043903|-/CCAAAGTGTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.9615661501884	3	486.957511	1457.8507	5.4773	0.0026672	2.4639	0.0011998	7.9412	0.003867	486.95895840839137	88.125	1.9797	89.182	88.486	90.465	1.0562					148	61	4	0	0	0	0.98455	1	37045	37045		4.7159	3.3863	1	2959200	+		40920	8162	19987	20070	47255	47255					0.14009266956281863
VTWFKNDR	8	Unmodified	_VTWFKNDR_					0	0	0		ENSG00000163395|ENST00000335211|IGFN1;nc|ENSG00000163395|Q86VF2-2|IGFN1;nc|ENSG00000163395|Q86VF2|IGFN1	ENSG00000163395|ENST00000335211|IGFN1	ENSG00000163395|ENST00000335211|IGFN1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1914550662041	2	533.277441	1064.54033	1.067	0.00056903	-0.093393	-4.9805E-05	0.97366	0.00051923	533.7784267307832	30.139	0.18309	31.954	31.83	32.013	1.8151					7	5	2	0	0	0	2.3239	1	12622	12622		7.9102	2.6795	1	189340			40921	3676	19988	20071	47256	47256					0.01063992020317528
VTWMRRMRIL	10	Unmodified	_VTWMRRMRIL_					0	0	0		ENSG00000108298|ENST00000225430|RPL19;ENST00000418154.1_1_1:64254543-64254969:-|nuORF;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19;ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENSG00000108298|ENST00000225430|RPL19	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	681.2332031130791	2	681.386477	1360.7584	1.6808	0.0011452	-2.663	-0.0018146	-0.98229	-0.00066932	681.3854000987993	47.456	0.32622	47.786	47.574	47.9	0.33034					24	10	3	0	0	0	0.1256	1	19843	19843		0.45834	0	1	3670800			40922	1628;6509	19989	20072	47257	47257					0.09245142346776447
VTYGLEKTR	9	Unmodified	_VTYGLEKTR_					0	0	0			REV__ENST00000296325.9_1_4:3514703-3533784:-|nuORF	REV__ENST00000296325.9_1_4:3514703-3533784:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	533.1909667849541	2	533.798206	1065.58186	1.6788	0.00089615	-0.58401	-0.00031174	1.0948	0.00058441	533.7977026351595	38.597	0.2646	38.905	38.765	39.03	0.30857					20	9	3	0	0	0	0.11568	1	16196	16196		6.7232	3.1267	1	2017700	+		40923	10709	19990	20073	47258	47258					0.05169127988983746
VTYKNRER	8	Unmodified	_VTYKNRER_					0	0	0		nc|ENSG00000138658|Q86YA3-3|ZGRF1;nc|ENSG00000138658|Q86YA3-6|ZGRF1;ENST00000514770.5_1_4:113532004-113549797:-|nuORF;nc|ENSG00000138658|Q86YA3-5|ZGRF1;ENST00000264370.9_1_4:113529030-113554332:-|nuORF;nc|ENSG00000138658|Q86YA3-4|ZGRF1;ENSG00000138658|ENST00000505019|ZGRF1	nc|ENSG00000138658|Q86YA3-3|ZGRF1	nc|ENSG00000138658|Q86YA3-3|ZGRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	533.1917602419853	2	533.293622	1064.57269	2.2426	0.001196	2.9029	0.0015481	5.1455	0.0027441	533.295029895614	90.466	0.36383	90.466	90.288	90.651	0					20	11	2	0	0	0	2.3239	1	37772	37772		4.756	1.4747	1	2861300			40924	2844	19991	20074	47259	47259					0.042987794233113164
VTYKPLRSV	9	Unmodified	_VTYKPLRSV_					0	0	0		ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	531.3537475466728	2	531.818941	1061.62333	2.4948	0.0013268	-3.5497	-0.0018878	-1.0549	-0.00056101	531.8167698057908	70.148	0.72621	71.986	71.593	72.319	1.8378					33	22	2	0	0	0	0.10844	1	29449	29449		11.64	3.7301	1	1432200			40925	7341	19992	20075	47260	47260					0.09498308748334239
VTYKPLRSV	9	Unmodified	_VTYKPLRSV_					0	0	0		ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	531.818941	1061.62333	1.6989	0.00090349	-3.2931	-0.0017513	-1.5942	-0.00084783	531.8169275021845	71.702	1.1732	71.702	71.415	72.588	0	-0.11985	0.00011711	NaN	11.64	77	36	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1660900			40926	7341	19992	20075							0.09498308748334239
VTYKPLRSV	9	Unmodified	_VTYKPLRSV_					0	0	0		ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	ENST00000563051.1_1_16:781392-781641:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	531.818941	1061.62333	1.7622	0.00093719	-3.0707	-0.0016331	-1.3085	-0.00069589	531.8174084279432	71.394	1.2739	71.717	71.367	72.641	0.32359	-0.10442	0.00035361	NaN	11.64	79	39	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1960200			40927	7341	19992	20075							0.09498308748334239
VTYNYPVHY	9	Unmodified	_VTYNYPVHY_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.2781249880791	2	578.277106	1154.53966	0.50012	0.00028921	-0.41819	-0.00024183	0.081934	4.7381E-05	578.2768426434066	32.207	0.30956	33.486	33.33	33.64	1.2782					26	10	3	0	0	0	0.042029	2	13488	13488;13541		74.423	41.637	1	4265400			40928	1792	19993	20076	47261;47262	47261					-0.03142847419394457
VTYNYPVHY	9	Unmodified	_VTYNYPVHY_					0	0	0		nc|ENSG00000112697|Q9NV96-3|TMEM30A;nc|ENSG00000112697|Q9NV96-2|TMEM30A;ENSG00000112697|ENST00000230461|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	nc|ENSG00000112697|Q9NV96-3|TMEM30A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.2771484255791	2	578.277106	1154.53966	0.83636	0.00048365	-0.63809	-0.00036899	0.19826	0.00011465	578.2768465482334	31.66	0.33916	33.484	33.302	33.641	1.8246					34	13	3	0	0	0	0.031324	2	13296	13246;13296		85.357	50.955	1	4449700			40929	1792	19993	20076	47263;47264	47264					-0.03142847419394457
VTYPGELLL	9	Unmodified	_VTYPGELLL_					0	0	0		ENSG00000146386|ENST00000367660|ABRACL	ENSG00000146386|ENST00000367660|ABRACL	ENSG00000146386|ENST00000367660|ABRACL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1004.569628894329	1	1004.56627	1003.559	3.8214	0.0038388	0.70354	0.00070675	4.5249	0.0045456	1005.5702897090879	72.971	0.31099	74.301	74.101	74.412	1.3298					13	9	2	0	0	0	0.083604	1	30650	30650		54.774	12.679	1	2514000			40930	3150	19994	20077	47265	47265					0.05736108871542456
VTYPRRLE	8	Unmodified	_VTYPRRLE_					0	0	0			REV__CON__Q2UVX4	REV__CON__Q2UVX4	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2971069216728	2	517.293091	1032.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.89	1	113.04	112.54	113.54	0.14912								0	0	0	1.0178	1	48892	48892		19.439	0	1		+	+	40931	8388	19995	20078	47266	47266					0.05664565054416926
VTYSLLER	8	Unmodified	_VTYSLLER_					0	0	0		PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant;nc|ENSG00000243232|Q9Y5I4-2|PCDHAC2;ENSG00000243232|ENST00000289269|PCDHAC2	PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant	PCDHAC2|p.H770Pfs*34|1|0.02|ENSG00000243232|chr5:140969074-140969075|-/CCCTGCAGGAGAACAGT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	490.7743102908134	2	490.7742	979.533846	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.141	1	58.141	57.641	58.641	0								0	0	0	1.0178	1	24256	24256		7.9102	0	1				40932	5352	19996	20079	47267	47267					0.043260540689630034
VTYWQQTE	8	Unmodified	_VTYWQQTE_					0	0	0			REV__ENSG00000185033|ENST00000411539|SEMA4B	REV__ENSG00000185033|ENST00000411539|SEMA4B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	527.7490112185478	2	527.745639	1053.47673	1.939	0.0010233	-0.47852	-0.00025254	1.4605	0.00077078	527.7449294767672	67.173	0.43927	67.496	67.366	67.805	0.32269					19	14	2	0	0	0	2.3239	1	28234	28234		0.79363	0	1	486690	+		40933	11443	19997	20080	47268	47268					-0.047874132074412046
VVAARARRLGG	11	Unmodified	_VVAARARRLGG_					0	0	0		nc|ENSG00000090006|Q8N2S1-3|LTBP4	nc|ENSG00000090006|Q8N2S1-3|LTBP4	nc|ENSG00000090006|Q8N2S1-3|LTBP4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.3537475466728	2	563.351806	1124.68906	1.8611	0.0010484	-0.46538	-0.00026217	1.3957	0.00078627	563.3514764376096	83.287	1.0447	83.287	82.892	83.937	0					66	33	3	0	0	0	1.0405	2	34719	34719;34835		0	0	1	1643900			40934	7837	19998	20081	47269;47270	47269					0.13170142713852329
VVAGALHA	8	Unmodified	_VVAGALHA_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	737.4324218630791	1	737.43045	736.423173	1.3734	0.0010128	2.1023	0.0015503	3.4757	0.0025631	737.4316473348597	104.5	0.071777	104.5	104.46	104.53	0					8	3	3	0	0	0	0.89176	1	44122	44122		0.79363	0	1	43002000	+		40935	9103	19999	20082	47271	47271					0.04441878871375593
VVAGALHA	8	Unmodified	_VVAGALHA_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	737.4319335818291	1	737.43045	736.423173	2.4918	0.0018375	1.7914	0.0013211	4.2832	0.0031586	737.430794105345	104.45	0.075554	104.61	104.56	104.64	0.16055					11	3	4	0	0	0	0.89176	1	44242	44242		0.79363	0	1	47901000	+		40936	9103	19999	20082	47272	47272					0.04441878871375593
VVAGALHA	8	Unmodified	_VVAGALHA_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	737.43045	736.423173	1.3734	0.0010128	2.1023	0.0015503	3.4757	0.0025631	737.4316473348597	104.5	0.071777	104.5	104.46	104.53	0	-0.050641	0.00088197	NaN	0.79363	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	43002000	+		40937	9103	19999	20082							0.04441878871375593
VVAGALHA	8	Unmodified	_VVAGALHA_					0	0	0			REV__ENSG00000103269|ENST00000352681|RHBDL1	REV__ENSG00000103269|ENST00000352681|RHBDL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	737.43045	736.423173	2.4918	0.0018375	1.7914	0.0013211	4.2832	0.0031586	737.430794105345	104.45	0.075554	104.61	104.56	104.64	0.16055	0.059553	0.00065276	NaN	0.79363	11	3	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	47901000	+		40938	9103	19999	20082							0.04441878871375593
VVAGGSGG	8	Unmodified	_VVAGGSGG_					0	0	0		nc|ENSG00000167716|Q562E7-3|WDR81;ENST00000464528.5_1_17:1630890-1639119:+|nuORF;nc|ENSG00000167716|Q562E7-4|WDR81;ENSG00000167716|ENST00000409644|WDR81	nc|ENSG00000167716|Q562E7-3|WDR81	nc|ENSG00000167716|Q562E7-3|WDR81	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1605712771416	2	302.158471	602.30239	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.71	1	104.88	104.38	105.38	0.1731								0	0	0	1.0178	1	44366	44366		0	0	1				40939	3989	20000	20083	47273	47273					-0.01466948842085003
VVAGKLPA	8	Unmodified	_VVAGKLPA_					0	0	0			REV__tr|A0A553SL74|A0A553SL74_NIACI3-phosphoshikimate1-carboxyvinyltransferaseOS=NialliacirculansOX=1397GN=aroAPE=3SV=1	REV__tr|A0A553SL74|A0A553SL74_NIACI3-phosphoshikimate1-carboxyvinyltransferaseOS=NialliacirculansOX=1397GN=aroAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	377.7437621951103	2	377.744714	753.474875	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.238	1	75.238	74.738	75.738	0								0	0	0	1.0178	1	31324	31324		0.79363	0	1		+		40940	14978	20001	20084	47274	47274					0.08827622565263482
VVAGRRKS	8	Unmodified	_VVAGRRKS_					0	0	0		TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant;TMEM132D|p.T1049Afs*28|1|0.05|ENSG00000151952|chr12:129074030-129074031|-/ACTGTACTCTGGAATGTGTGCGTCGATGC|frameshift_variant;ENSG00000151952|ENST00000422113|TMEM132D	TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	436.7747680544853	2	436.774868	871.535184	1.2841	0.00056085	-1.0969	-0.00047909	0.18719	8.1758E-05	436.7744327057761	73.507	1.4681	73.507	73.153	74.621	0					113	46	5	0	0	0	0.89176	1	30607	30607		0.79363	0	1	353690000			40941	3307	20002	20085	47275	47275					0.09427732948370249
VVAGRRKS	8	Unmodified	_VVAGRRKS_					0	0	0		TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant;TMEM132D|p.T1049Afs*28|1|0.05|ENSG00000151952|chr12:129074030-129074031|-/ACTGTACTCTGGAATGTGTGCGTCGATGC|frameshift_variant;ENSG00000151952|ENST00000422113|TMEM132D	TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	TMEM132D|p.K948Tfs*15|1|0.06|ENSG00000151952|chr12:129074331-129074332|TT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	436.7755615115166	2	436.774868	871.535184	2.6421	0.001154	-1.0643	-0.00046486	1.5778	0.00068915	436.7743459189629	73.24	1.4335	73.565	73.276	74.71	0.32494					128	45	6	0	0	0	0.89176	1	30628	30628		0.79363	0	1	532050000			40942	3307	20002	20085	47276	47276					0.09427732948370249
VVASNIYSAML	11	Unmodified	_VVASNIYSAML_					0	0	0		nc|ENSG00000106771|Q9H330-3|TMEM245;ENSG00000106771|ENST00000374586|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3047363162041	2	584.307549	1166.60055	1.4258	0.00083309	-3.2651	-0.0019078	-1.8394	-0.0010747	584.3051681378955	83.974	0.82187	85.162	84.796	85.618	1.1879					33	26	2	0	0	0	0.74096	1	35248	35248		17.113	0.96379	1	1505700			40943	1584	20003	20086	47277	47277					0.023909215685307572
VVASNIYSAML	11	Unmodified	_VVASNIYSAML_					0	0	0		nc|ENSG00000106771|Q9H330-3|TMEM245;ENSG00000106771|ENST00000374586|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	nc|ENSG00000106771|Q9H330-3|TMEM245	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	584.307549	1166.60055	1.6994	0.000993	-2.9227	-0.0017077	-1.2232	-0.00071474	584.3052820447149	83.367	0.5889	85.005	84.758	85.347	1.6379	-0.0785	0.00021013	NaN	17.113	22	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	935320			40944	1584	20003	20086							0.023909215685307572
VVAVGTGG	8	Unmodified	_VVAVGTGG_					0	0	0		ENSG00000173545|ENST00000308683|ZNF622	ENSG00000173545|ENST00000308683|ZNF622	ENSG00000173545|ENST00000308683|ZNF622	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	330.1919128298759	2	330.189771	658.36499	1.7476	0.00057702	0.043606	1.4398E-05	1.7912	0.00059142	330.1911115827687	59.587	1.2665	59.912	59.555	60.822	0.32554					65	43	2	0	0	0	0.89176	1	24964	24964		0.79363	0	1	1406700			40945	4286	20004	20087	47278	47278					0.02214197226101078
VVCFVFQW	8	Unmodified	_VVCFVFQW_					0	0	0		ENST00000407983.7_1_2:272104-272329:+|nuORF	ENST00000407983.7_1_2:272104-272329:+|nuORF	ENST00000407983.7_1_2:272104-272329:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1738159060478	3	343.173846	1026.49971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.109	1	71.109	70.609	71.609	0								0	0	0	1.0178	1	29616	29616		0.45834	0	1				40946	6373	20005	20088	47279	47279					-0.01248065623644834
VVCFVFQW	8	Unmodified	_VVCFVFQW_					0	0	0		ENST00000407983.7_1_2:272104-272329:+|nuORF	ENST00000407983.7_1_2:272104-272329:+|nuORF	ENST00000407983.7_1_2:272104-272329:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1735717654228	3	343.173846	1026.49971	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.238	1	71.238	70.738	71.738	0								0	0	0	1.0178	1	29668	29668		0.45834	0	1				40947	6373	20005	20088	47280	47280					-0.01248065623644834
VVCRQCGH	8	Unmodified	_VVCRQCGH_					0	0	0		sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1;sp|P16786|UL49_HCMVAUncharacterizedproteinUL49OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL49PE=3SV=1	sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	sp|Q6SW82|UL49_HCMVMProteinUL49OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL49PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	301.1437560915947	3	301.142552	900.405826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.173	1	61.173	60.673	61.673	0								0	0	0	1.0178	1	25508	25508		0.45834	0	1				40948	15998	20006	20089	47281	47281					-0.048361079975734356
VVCWELWRR	9	Unmodified	_VVCWELWRR_					0	0	0		ENST00000457671.1_1_1:161860623-161860854:+|nuORF	ENST00000457671.1_1_1:161860623-161860854:+|nuORF	ENST00000457671.1_1_1:161860623-161860854:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	416.2224914431572	3	416.22197	1245.64408	0.44283	0.00018432	2.1731	0.00090451	2.616	0.0010888	416.2227930450536	13.008	0.34544	13.107	12.903	13.249	0.09944					18	10	3	0	0	0	0.62937	1	5397	5397		10.151	0.9068	1	808160			40949	6650	20007	20090	47282	47282					0.03108575856299467
VVCWELWRR	9	Unmodified	_VVCWELWRR_					0	0	0		ENST00000457671.1_1_1:161860623-161860854:+|nuORF	ENST00000457671.1_1_1:161860623-161860854:+|nuORF	ENST00000457671.1_1_1:161860623-161860854:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	416.22197	1245.64408	0.063198	2.6304E-05	4.3256	0.0018004	4.3888	0.0018267	416.22412281109183	12.384	0.36105	13.171	13.034	13.395	0.78751	-0.065431	0.0014145	NaN	10.151	13	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358020			40950	6650	20007	20090							0.03108575856299467
VVDAQQLW	8	Unmodified	_VVDAQQLW_					0	0	0			REV__nc|ENSG00000112667|O43598-2|DNPH1	REV__nc|ENSG00000112667|O43598-2|DNPH1	MSMS	GG20161007_CRH_Patient100_A02_01	1	320.1703979372978	3	320.17127	957.491981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.679	1	47.679	47.179	48.179	0								0	0	0	1.0178	1	19922	19922		0.45834	0	1		+		40951	9366	20008	20091	47283	47283					0.01153498380426754
VVDDIKLV	8	Unmodified	_VVDDIKLV_					0	0	0			REV__CCT4|p.I529V|1|0.24|ENSG00000115484|chr2:61869460-61869460|T/C|missense_variant	REV__CCT4|p.I529V|1|0.24|ENSG00000115484|chr2:61869460-61869460|T/C|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	450.2744018435478	2	450.773668	899.532783	2.5344	0.0011424	-0.19472	-8.7773E-05	2.3397	0.0010547	450.7745739206529	87.206	0.37412	87.206	87.029	87.403	0					24	15	2	0	0	0	2.3239	1	36467	36467		2.5775	0	1	3023600	+		40952	8188	20009	20092	47284	47284					0.07899839700030498
VVDIVQEL	8	Unmodified	_VVDIVQEL_					0	0	0		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	914.5233032107353	1	914.519325	913.512048	2.8601	0.0026156	0.068287	6.245E-05	2.9284	0.002678	914.5198310482378	61.191	0.33699	62.611	62.409	62.746	1.4196					17	10	2	0	0	0	0.15813	2	25642	25642;25697		85.272	22.699	1	1932000			40953	3547	20010	20093	47285;47286	47285					0.05183249320384675
VVDIVQEL	8	Unmodified	_VVDIVQEL_					0	0	0		nc|ENSG00000160209|O00764-3|PDXK;ENST00000398078.7_1_21:45161468-45175941:+|nuORF;ENSG00000160209|ENST00000291565|PDXK	nc|ENSG00000160209|O00764-3|PDXK	nc|ENSG00000160209|O00764-3|PDXK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	914.5220214724541	1	914.519325	913.512048	3.1759	0.0029044	-0.39962	-0.00036546	2.7763	0.002539	914.5190041216229	60.657	0.27832	62.622	62.482	62.76	1.9653					15	8	2	0	0	0	0.35082	1	25436	25436		65.235	3.8776	1	1199800			40954	3547	20010	20093	47287	47287					0.05183249320384675
VVDKREVI	8	Unmodified	_VVDKREVI_					0	0	0		nc|ENSG00000126777|Q86UP2-2|KTN1;nc|ENSG00000126777|Q86UP2-3|KTN1;nc|ENSG00000126777|Q86UP2-4|KTN1;ENSG00000126777|ENST00000395314|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	nc|ENSG00000126777|Q86UP2-2|KTN1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	479.2911254763603	2	479.290017	956.565481	1.3729	0.000658	0.59433	0.00028486	1.9672	0.00094285	479.29030122384	45.677	0.47482	47.648	47.407	47.882	1.9703					40	14	4	0	0	0	0.76103	2	19114	19114;19165		24.674	2.8865	1	6009100			40955	2316	20011	20094	47288;47289	47288					0.0854604682289164
VVDPGKVK	8	Unmodified	_VVDPGKVK_					0	0	0		FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant;nc|ENSG00000128591|Q14315-2|FLNC;ENSG00000128591|ENST00000325888|FLNC	FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant	FLNC|p.I2110Tfs*16|1|0.33|ENSG00000128591|chr7:128853588-128853591|ATCA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	421.2599975466728	2	421.260728	840.506903	0.82429	0.00034724	-2.3064	-0.00097161	-1.4822	-0.00062437	421.2597240719134	65.913	0.44716	65.913	65.676	66.123	0					37	13	4	0	0	0	0.89008	1	27455	27455		2.5775	0	1	12368000			40956	2374	20012	20095	47290	47290					0.08026990248424681
VVDYTKVDR	9	Unmodified	_VVDYTKVDR_					0	0	0		ENSG00000064313|ENST00000378164|TAF2;TAF2|p.T931Lfs*29|1|0.07|ENSG00000064313|chr8:119756093-119756094|-/ATTTGGAAAAACAGAAATACAAATAG|frameshift_variant	ENSG00000064313|ENST00000378164|TAF2	ENSG00000064313|ENST00000378164|TAF2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	547.3334838747978	2	547.795663	1093.57677	1.7366	0.00095132	-0.486	-0.00026623	1.2506	0.00068509	547.7948472162348	47.077	0.33902	47.407	47.265	47.604	0.33034					18	10	2	0	0	0	0.11812	1	19827	19827		0.52476	0	1	1038500			40957	770	20013	20096	47291	47291					0.03372824126358864
VVEDGILKL	9	Unmodified	_VVEDGILKL_					0	0	0		CTNNA1-KDM3B|1|fusion;ENSG00000044115|ENST00000302763|CTNNA1;nc|ENSG00000044115|P35221-2|CTNNA1	CTNNA1-KDM3B|1|fusion;ENSG00000044115|ENST00000302763|CTNNA1	ENSG00000044115|ENST00000302763|CTNNA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.2998840212822	2	493.30005	984.585547	2.5445	0.0012552	-1.9726	-0.00097307	0.57194	0.00028214	493.2985682205819	47.762	0.21739	49.738	49.649	49.867	1.976					11	6	2	0	0	0	0.18809	1	20035	20035		34.402	7.5181	1	906320			40958	383;670	20014	20097	47292	47292					0.09263797762855575
VVEESGCLRWL	11	Unmodified	_VVEESGCLRWL_					0	0	0			REV__SLAMF9|p.W24L|1|0.06|ENSG00000162723|chr1:159953629-159953629|C/A|missense_variant	REV__SLAMF9|p.W24L|1|0.06|ENSG00000162723|chr1:159953629-159953629|C/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885986208916	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.996	1	5.7324	5.2324	6.2324	0.73642								0	0	0	0.63775	1	2073	2073		0.094841	0	1		+		40959	14622	20015	20098	47293	47293					0.010571113458354375
VVEIKKGDNI	10	Unmodified	_VVEIKKGDNI_					0	0	0		tr|A0A7D7A5H7|A0A7D7A5H7_9CLOTB12-bindingdomain-containingradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06115PE=4SV=1	tr|A0A7D7A5H7|A0A7D7A5H7_9CLOTB12-bindingdomain-containingradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06115PE=4SV=1	tr|A0A7D7A5H7|A0A7D7A5H7_9CLOTB12-bindingdomain-containingradicalSAMproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06115PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8301269412041	2	557.826963	1113.63937	1.8109	0.0010102	2.857	0.0015937	4.6679	0.0026039	557.8283739597048	78.044	0.59066	79.796	79.622	80.213	1.7514					39	18	3	0	0	0	0.79268	1	32701	32701		13.042	0	1	1776000			40960	17298	20016	20099	47294	47294					0.08709970194558991
VVEKVLHLL	9	Unmodified	_VVEKVLHLL_					0	0	0			REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	REV__nc|ENSG00000142197|Q9Y3R5-2|DOP1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	350.5616638064384	3	350.562099	1048.66447	-0.99707	-0.00034954	-4.0576	-0.0014224	-5.0547	-0.001772	350.5609226238639	46.611	0.15626	46.611	46.536	46.692	0					7	4	2	0	0	0	0.84009	1	19497	19497		1.7423	0.26037	1	247270	+		40961	10172	20017	20100	47295	47295					0.14208069787810018
VVEPLPII	8	Unmodified	_VVEPLPII_					0	0	0			REV__ENSG00000166856|ENST00000300098|GPR182	REV__ENSG00000166856|ENST00000300098|GPR182	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	440.3382446169853	2	440.281129	878.547705	0.84064	0.00037012	0.66386	0.00029229	1.5045	0.0006624	440.281027625127	101.3	0.27148	101.3	101.26	101.53	0					12	8	3	0	0	0	2.3239	1	42449	42449		0	0	1	2035600	+		40962	10843	20018	20101	47296	47296					0.1035733156805918
VVEVRGSNG	9	Unmodified	_VVEVRGSNG_					0	0	0		nc|ENSG00000102081|Q06787-11|FMR1;nc|ENSG00000102081|Q06787-10|FMR1;nc|ENSG00000102081|Q06787-8|FMR1;nc|ENSG00000102081|Q06787-6|FMR1;nc|ENSG00000102081|Q06787-2|FMR1;nc|ENSG00000102081|Q06787-4|FMR1;nc|ENSG00000102081|Q06787-5|FMR1;nc|ENSG00000102081|Q06787-9|FMR1;nc|ENSG00000102081|Q06787-7|FMR1;nc|ENSG00000102081|Q06787-3|FMR1;ENSG00000102081|ENST00000370475|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	nc|ENSG00000102081|Q06787-11|FMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	916.4869872927666	1	916.48467	915.477394	1.1076	0.0010151	1.2888	0.0011812	2.3965	0.0021963	916.4861622951053	58.594	0.384	60.012	59.845	60.229	1.4181					35	11	4	0	0	0	0.19075	1	24527	24527		34.102	7.2188	1	6944500			40963	1380	20019	20102	47297	47297					0.01627426232300877
VVEVSSSMLL	10	Unmodified	_VVEVSSSMLL_					0	0	0		tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	tr|A0A7D7A2K1|A0A7D7A2K1_9CLOTCa(2+)/H(+)antiporterOS=ClostridiumintestinaleOX=36845GN=caxPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	355.2702514529228	3	355.194976	1062.5631	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.33	1	110.48	109.98	110.98	0.15228								0	0	0	0.66264	1	47845	47845		0	0	1				40964	17260	20020	20103	47298	47298					0.03431830302952221
VVEVTGGL	8	Unmodified	_VVEVTGGL_					0	0	0			REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	773.5627929568291	1	773.440346	772.433069	1.3211	0.0010218	4.2503	0.0032874	5.5714	0.0043092	773.443077674182	107.92	0.052551	107.92	107.88	107.93	0					4	2	2	0	0	0	2.3239	1	46385	46385		0	0	1	24249000	+		40965	15743	20021	20104	47299	47299					0.03775022086119861
VVEVTGGL	8	Unmodified	_VVEVTGGL_					0	0	0			REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	REV__tr|A0A7D6ZWA8|A0A7D6ZWA8_9CLOTChemotaxisproteinCheAOS=ClostridiumintestinaleOX=36845GN=HZF06_17060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	773.5610839724541	1	773.440346	772.433069	2.7385	0.0021181	0.030392	2.3506E-05	2.7689	0.0021416	773.4402927357212	107.96	0.057739	108.01	107.98	108.04	0.050644					4	2	2	0	0	0	2.3239	1	46308	46308		0	0	1	27624000	+		40966	15743	20021	20104	47300	47300					0.03775022086119861
VVFHFEFFPF	10	Unmodified	_VVFHFEFFPF_					0	0	0		ENSG00000154309|ENST00000675850|DISP1	ENSG00000154309|ENST00000675850|DISP1	ENSG00000154309|ENST00000675850|DISP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	439.2206298708916	3	439.221853	1314.64373	1.7604	0.00077319	-3.2405	-0.0014233	-1.4802	-0.00065013	439.2205601323415	54.996	0.34114	56.401	56.24	56.581	1.4048					27	11	3	0	0	0	0.80072	1	23031	23031		12.175	0.54338	1	2361700			40967	3384	20022	20105	47301	47301					-0.0010052059187728446
VVFHFEFFPF	10	Unmodified	_VVFHFEFFPF_					0	0	0		ENSG00000154309|ENST00000675850|DISP1	ENSG00000154309|ENST00000675850|DISP1	ENSG00000154309|ENST00000675850|DISP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	439.221853	1314.64373	1.8122	0.00079595	-4.3383	-0.0019055	-2.5261	-0.0011095	439.2198758388972	54.542	0.28912	56.51	56.379	56.668	1.9684	0.054735	-0.0007608	NaN	12.175	18	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2312200			40968	3384	20022	20105							-0.0010052059187728446
VVFPQGAIGQV	11	Unmodified	_VVFPQGAIGQV_					0	0	0			REV__nc|ENSG00000143375|Q9P2M7-2|CGN	REV__nc|ENSG00000143375|Q9P2M7-2|CGN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8188964724541	2	557.816399	1113.61824	2.281	0.0012724	2.351	0.0013114	4.6319	0.0025838	557.817708179325	82.94	0.46892	84.61	84.386	84.855	1.67					27	14	2	0	0	0	0.89563	1	34815	34815		10.074	0	1	3185200	+		40969	8202	20023	20106	47302	47302					0.06598004885699993
VVFYEQKL	8	Unmodified	_VVFYEQKL_					0	0	0			REV__nc|ENSG00000100504|P06737-2|PYGL	REV__nc|ENSG00000100504|P06737-2|PYGL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.2900878787041	2	513.286943	1024.55933	2.0542	0.0010544	0.92897	0.00047683	2.9831	0.0015312	513.2877459812114	62.208	0.4665	62.538	62.321	62.788	0.32974					24	14	2	0	0	0	0.87935	1	26134	26134		9.3474	0.75416	1	857680	+		40970	8993	20024	20107	47303	47303					0.04803528591378381
VVGAGGGG	8	Unmodified	_VVGAGGGG_					0	0	0		nc|ENSG00000162367|P17542-3|TAL1;nc|ENSG00000162367|P17542-2|TAL1;ENSG00000162367|ENST00000691006|TAL1	nc|ENSG00000162367|P17542-3|TAL1	nc|ENSG00000162367|P17542-3|TAL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3018676638603	1	573.299101	572.291825	2.1687	0.0012433	2.8278	0.0016212	4.9966	0.0028645	573.3005946109828	57.067	0.53694	57.388	57.109	57.646	0.32103					37	22	2	0	0	0	0.89198	1	23915	23915		0	0	1	6928400			40971	3613	20025	20108	47304	47304					-0.011429314965084814
VVGAGPSV	8	Unmodified	_VVGAGPSV_					0	0	0		ENST00000530897.1_1_11:1331005-1331308:+|nuORF	ENST00000530897.1_1_11:1331005-1331308:+|nuORF	ENST00000530897.1_1_11:1331005-1331308:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	343.5350219607353	2	343.197596	684.38064	0.41502	0.00014243	2.7037	0.00092789	3.1187	0.0010703	343.1985286861819	25.197	0.46215	25.449	25.151	25.613	0.25197					19	14	2	0	0	0	2.3239	1	10539	10539		0.79363	0	1	237240			40972	7165	20026	20109	47305	47305					0.025824837431400738
VVGAGPSV	8	Unmodified	_VVGAGPSV_					0	0	0		ENST00000530897.1_1_11:1331005-1331308:+|nuORF	ENST00000530897.1_1_11:1331005-1331308:+|nuORF	ENST00000530897.1_1_11:1331005-1331308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1983825564384	2	343.197596	684.38064	-0.048804	-1.6749E-05	3.9965	0.0013716	3.9477	0.0013548	343.19915667099303	20.468	0.92052	22.043	21.639	22.559	1.5748					84	30	5	0	0	0	0.89176	1	8632	8632		0.79363	0	1	240480000			40973	7165	20026	20109	47306	47306					0.025824837431400738
VVGALILR	8	Unmodified	_VVGALILR_					0	0	0		ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	840.5696899294853	1	840.566549	839.559273	1.2237	0.0010286	1.3143	0.0011048	2.538	0.0021334	840.5678058449403	108.36	0.25838	108.36	108.2	108.46	0					26	12	3	0	0	0	0.89176	1	46668	46668		0.79363	0	1	27219000			40974	5367	20027	20110	47307	47307					0.13307573382041937
VVGALILR	8	Unmodified	_VVGALILR_					0	0	0		ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	420.7885619997978	2	420.786913	839.559273	3.0322	0.0012759	1.6047	0.00067522	4.6368	0.0019511	420.78735505695903	106.22	0.20174	106.28	106.19	106.39	0.05455					27	9	4	0	0	0	0.89176	1	45205	45205		0.79363	0	1	72100000			40975	5367	20027	20110	47308	47308					0.13307573382041937
VVGALILR	8	Unmodified	_VVGALILR_					0	0	0		ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	840.5698730349541	1	840.566549	839.559273	2.7788	0.0023358	0.75599	0.00063546	3.5348	0.0029713	840.5669863902137	106.22	0.2001	106.28	106.17	106.37	0.05455					25	9	4	0	0	0	0.89176	1	45247	45247		0.79363	0	1	196790000			40976	5367	20027	20110	47309	47309					0.13307573382041937
VVGALILR	8	Unmodified	_VVGALILR_					0	0	0		ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	ENSG00000247315|ENST00000500893|ZCCHC3	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	840.566549	839.559273	2.7782	0.0023353	-1.3913	-0.0011695	1.3869	0.0011658	840.5655598762633	108.38	0.17934	108.43	108.26	108.44	0.050644	-0.0074329	-0.00067348	NaN	0.79363	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7406600			40977	5367	20027	20110							0.13307573382041937
VVGALLGGG	9	Unmodified	_VVGALLGGG_					0	0	0			REV__ENSG00000139410|ENST00000403593|SDSL	REV__ENSG00000139410|ENST00000403593|SDSL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1013061404228	2	371.726521	741.438489	0.49172	0.00018278	3.1034	0.0011536	3.5951	0.0013364	371.7278801578796	29.876	0.21488	31.691	31.554	31.769	1.8151					12	6	3	0	0	0	0.11957	1	12552	12552		0	0	1	1606500	+		40978	10102	20028	20111	47310	47310					0.057427456685900324
VVGALLGGG	9	Unmodified	_VVGALLGGG_					0	0	0			REV__ENSG00000139410|ENST00000403593|SDSL	REV__ENSG00000139410|ENST00000403593|SDSL	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	371.726521	741.438489	-0.983	-0.00036541	5.2222	0.0019412	4.2392	0.0015758	371.7284718270264	32.036	0.34311	32.036	31.821	32.164	0	0.20708	0.00094875	NaN	0	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1378200	+		40979	10102	20028	20111							0.057427456685900324
VVGAPRGR	8	Unmodified	_VVGAPRGR_					0	0	0		ENST00000463554.5_1_2:233599907-233635753:+|nuORF;GIGYF2|p.R396Hfs*77|1|0.02|ENSG00000204120|chr2:232791349-232791350|-/CATTC|frameshift_variant;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2	ENST00000463554.5_1_2:233599907-233635753:+|nuORF	ENST00000463554.5_1_2:233599907-233635753:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	406.2483398318291	2	406.248486	810.48242	0.23794	9.6662E-05	0.20758	8.4328E-05	0.44552	0.00018099	406.24858817811304	70.461	1.1698	70.461	69.866	71.035	0					103	37	5	0	0	0	0.89178	1	29467	29467		0.69038	0	1	372410000			40980	5125	20029	20112	47311	47311					0.06959774885569914
VVGAPRGR	8	Unmodified	_VVGAPRGR_					0	0	0		ENST00000463554.5_1_2:233599907-233635753:+|nuORF;GIGYF2|p.R396Hfs*77|1|0.02|ENSG00000204120|chr2:232791349-232791350|-/CATTC|frameshift_variant;nc|ENSG00000204120|Q6Y7W6-4|GIGYF2;nc|ENSG00000204120|Q6Y7W6-5|GIGYF2;ENSG00000204120|ENST00000373563|GIGYF2;nc|ENSG00000204120|Q6Y7W6-3|GIGYF2	ENST00000463554.5_1_2:233599907-233635753:+|nuORF	ENST00000463554.5_1_2:233599907-233635753:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	406.7511779665947	2	406.248486	810.48242	1.1635	0.00047267	0.39782	0.00016161	1.5613	0.00063428	406.2485207401386	68.962	0.98308	70.815	70.468	71.451	1.853					90	31	5	0	0	0	0.89178	1	28994	28994		0.69038	0	1	95586000			40981	5125	20029	20112	47312	47312					0.06959774885569914
VVGAVEVS	8	Unmodified	_VVGAVEVS_					0	0	0		ENST00000397809.9_1_12:94853375-94853438:-|nuORF	ENST00000397809.9_1_12:94853375-94853438:-|nuORF	ENST00000397809.9_1_12:94853375-94853438:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2173644900322	2	380.215986	758.417419	0.4019	0.00015281	2.3971	0.00091143	2.799	0.0010642	380.2166902714722	26.274	0.48514	28.021	27.733	28.218	1.747					37	15	3	0	0	0	0.89176	1	10983	10983		0.79363	0	1	9115100			40982	6315	20030	20113	47313	47313					0.02854735569053446
VVGAVIAG	8	Unmodified	_VVGAVIAG_					0	0	0		tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	343.2168151736259	2	343.215789	684.417025	0.075674	2.5973E-05	3.6938	0.0012678	3.7695	0.0012938	343.2170000139174	23.832	0.34005	25.073	24.866	25.206	1.241					13	10	2	0	0	0	0.89176	1	9968	9968		0.79363	0	1	588140			40983	17140	20031	20114	47314	47314					0.0621936063986368
VVGAVIAG	8	Unmodified	_VVGAVIAG_					0	0	0		tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	343.215789	684.417025	-2.1016	-0.0007213	6.5883	0.0022612	4.4867	0.0015399	343.2179923541956	25.277	0.24705	25.277	25.132	25.379	0	0.097184	0.0013828	NaN	0.79363	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	421930			40984	17140	20031	20114							0.0621936063986368
VVGAVIAG	8	Unmodified	_VVGAVIAG_					0	0	0		tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	tr|A0A7D6ZT69|A0A7D6ZT69_9CLOTHemolysinXhlAfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10260PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	343.215789	684.417025	0.39898	0.00013694	4.0866	0.0014026	4.4856	0.0015395	343.2171862678846	24.937	0.24645	25.189	25.027	25.274	0.25197	0.0095115	-0.00033447	NaN	0.79363	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	597150			40985	17140	20031	20114							0.0621936063986368
VVGAVLAE	8	Unmodified	_VVGAVLAE_					0	0	0			REV__ENST00000332439.4_1_17:7762018-7762066:+|nuORF	REV__ENST00000332439.4_1_17:7762018-7762066:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	379.2284423708916	2	379.226354	756.438155	1.6798	0.00063704	3.4455	0.0013066	5.1253	0.0019437	379.22797840484066	44.047	0.42061	44.371	44.151	44.572	0.32388					28	13	3	0	0	0	0.89176	1	18486	18486		0.79363	0	1	1698600	+		40986	12452	20032	20115	47315	47315					0.050193259487173236
VVGAVLAE	8	Unmodified	_VVGAVLAE_					0	0	0			REV__ENST00000332439.4_1_17:7762018-7762066:+|nuORF	REV__ENST00000332439.4_1_17:7762018-7762066:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	379.226354	756.438155	1.6798	0.00063704	3.4455	0.0013066	5.1253	0.0019437	379.22797840484066	44.047	0.42061	44.371	44.151	44.572	0.32388	0	0	NaN	0.79363	28	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1698600	+		40987	12452	20032	20115							0.050193259487173236
VVGAVTSAIL	10	Unmodified	_VVGAVTSAIL_					0	0	0			REV__nc|ENSG00000064300|P08138-2|NGFR	REV__nc|ENSG00000064300|P08138-2|NGFR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.2873107790947	2	465.286943	928.559333	2.4546	0.0011421	-2.689	-0.0012512	-0.23444	-0.00010908	465.2855822497386	71.918	0.53703	72.243	71.914	72.451	0.32494					47	16	4	0	0	0	0.87699	1	30153	30153		3.9444	1.8846	1	9547400	+		40988	8659	20033	20116	47316	47316					0.09219528591370363
VVGGALAA	8	Unmodified	_VVGGALAA_					0	0	0			REV__nc|ENSG00000132677|Q9H310-5|RHBG	REV__nc|ENSG00000132677|Q9H310-5|RHBG	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	657.6400634646416	1	657.393002	656.385725	3.1742	0.0020867	-0.19034	-0.00012513	2.9838	0.0019616	657.3922512742131	107.3	0.095039	107.46	107.39	107.49	0.15795					9	4	3	0	0	0	2.3239	1	46031	46031		0	0	1	5245500	+		40989	9854	20034	20117	47317	47317					0.04378787605742218
VVGGRGGGG	9	Unmodified	_VVGGRGGGG_					0	0	0			REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	715.3882324099541	1	715.384562	714.377286	1.4054	0.0010054	2.9526	0.0021123	4.358	0.0031177	715.3866215019268	104.48	0.091667	104.48	104.42	104.51	0					9	4	3	0	0	0	0.85403	1	44112	44112		0	0	1	24621000	+		40990	12604	20035	20118	47318	47318					0.00867233689166369
VVGGRGGGG	9	Unmodified	_VVGGRGGGG_					0	0	0			REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	715.384562	714.377286	1.4054	0.0010054	2.9526	0.0021123	4.358	0.0031177	715.3866215019268	104.48	0.091667	104.48	104.42	104.51	0	-0.050763	0.00078528	NaN	0	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24621000	+		40991	12604	20035	20118							0.00867233689166369
VVGGRGGGG	9	Unmodified	_VVGGRGGGG_					0	0	0			REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	715.384562	714.377286	2.6423	0.0018903	2.4323	0.00174	5.0745	0.0036302	715.3860814974734	104.43	0.092865	104.59	104.53	104.62	0.16055	0.060293	0.00041301	NaN	0	12	4	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31761000	+		40992	12604	20035	20118							0.00867233689166369
VVGGRGGGG	9	Unmodified	_VVGGRGGGG_					0	0	0			REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	REV__ENST00000361671.9_1_9:88556066-88557097:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	715.384562	714.377286	2.5995	0.0018596	1.367	0.00097795	3.9665	0.0028376	715.3854182195112	104.38	0.074936	104.55	104.5	104.58	0.1731	0.018884	-0.00034904	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	42505000	+		40993	12604	20035	20118							0.00867233689166369
VVGGVTEP	8	Unmodified	_VVGGVTEP_					0	0	0		tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.2091247439384	2	379.208161	756.401769	0.57758	0.00021902	2.7487	0.0010423	3.3263	0.0012614	379.20909250049027	32.119	0.39359	33.943	33.73	34.124	1.8246					33	13	3	0	0	0	0.89176	1	13434	13434		0.79363	0	1	10533000			40994	17011	20036	20119	47319	47319					0.013824490520050858
VVGGVTEP	8	Unmodified	_VVGGVTEP_					0	0	0		tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	379.208161	756.401769	-0.69132	-0.00026215	4.7257	0.001792	4.0344	0.0015299	379.20979510524967	33.871	0.36906	33.871	33.7	34.069	0	-0.08818	0.00079106	NaN	0.79363	30	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9855800			40995	17011	20036	20119							0.013824490520050858
VVGGVTEP	8	Unmodified	_VVGGVTEP_					0	0	0		tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	379.208161	756.401769	1.2332	0.00046763	3.4902	0.0013235	4.7234	0.0017911	379.20933449361956	33.773	0.38334	34.07	33.885	34.268	0.29701	0.11044	-0.00014593	NaN	0.79363	36	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10626000			40996	17011	20036	20119							0.013824490520050858
VVGGVTEP	8	Unmodified	_VVGGVTEP_					0	0	0		tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	tr|A0A7D6W0A2|A0A7D6W0A2_9CLOTPTStransportersubunitEIICOS=ClostridiumintestinaleOX=36845GN=HZF06_23010PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	379.208161	756.401769	-0.24318	-9.2217E-05	3.7243	0.0014123	3.4812	0.0013201	379.20946481174775	32.676	0.40059	33.954	33.734	34.135	1.2782	-0.0058954	3.1631E-05	NaN	0.79363	29	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	9846500			40997	17011	20036	20119							0.013824490520050858
VVGGVVLIG	9	Unmodified	_VVGGVVLIG_					0	0	0			REV__ENSG00000116688|ENST00000235329|MFN2	REV__ENSG00000116688|ENST00000235329|MFN2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	812.5276367068291	1	812.524016	811.516739	1.6332	0.001327	0.18445	0.00014987	1.8177	0.0014769	812.5236814431279	69.155	0.31133	69.155	69.047	69.358	0					15	9	2	0	0	0	0.39097	1	28796	28796		20.871	0	1	654120	+		40998	9477	20037	20120	47320	47320					0.10344178253819791
VVGIVILI	8	Unmodified	_VVGIVILI_					0	0	0		nc|ENSG00000130234|Q9BYF1-3|ACE2;ENSG00000130234|ENST00000252519|ACE2	REV__tr|A0A553SRW8|A0A553SRW8_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_02015PE=4SV=1	REV__tr|A0A553SRW8|A0A553SRW8_NIACITrkHfamilypotassiumuptakeproteinOS=NialliacirculansOX=1397GN=CEQ21_02015PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2955200076103	2	413.29404	824.573526	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.19	1	110.35	109.85	110.85	0.16133								0	0	0	1.0178	1	47873	47873		0	0	1				40999	2420	20038	20121	47321	47321					0.15422225810345935
VVGLCVKCRI	10	Unmodified	_VVGLCVKCRI_					0	0	0			REV__ENST00000590325.1_1_19:13049472-13051084:+|nuORF	REV__ENST00000590325.1_1_19:13049472-13051084:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.3181030154228	2	545.317197	1088.61984	1.4657	0.00079927	-0.10329	-5.6324E-05	1.3624	0.00074295	545.3169965484665	72.669	2.0628	72.669	71.732	73.795	0					126	65	2	0	0	0	0.89646	1	30143	30143		1.8442	0.19162	1	5427600	+		41000	14066	20039	20122	47322	47322					0.07907599378472696
VVGLCVKCRI	10	Unmodified	_VVGLCVKCRI_					0	0	0			REV__ENST00000590325.1_1_19:13049472-13051084:+|nuORF	REV__ENST00000590325.1_1_19:13049472-13051084:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	545.3179809451103	2	545.317197	1088.61984	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.838	1	72.163	71.663	72.663	0.32494								0	0	0	0.66008	1	30061	30061		4.3292	0	1		+		41001	14066	20039	20122	47323	47323					0.07907599378472696
VVGLLRDAIKR	11	Unmodified	_VVGLLRDAIKR_					0	0	0		nc|ENSG00000106633|P35557-3|GCK;ENSG00000106633|ENST00000403799|GCK;nc|ENSG00000106633|P35557-2|GCK	nc|ENSG00000106633|P35557-3|GCK	nc|ENSG00000106633|P35557-3|GCK	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.2197143435478	4	310.702849	1238.78229	0.13298	4.1318E-05	-2.7853	-0.00086539	-2.6523	-0.00082407	310.70179745122925	30.008	0.18532	31.823	31.738	31.923	1.8151					9	5	2	0	0	0	0.14606	1	12564	12564		0	0	1	225750			41002	1578	20040	20123	47324	47324					0.1724502237643719
VVGLMLLLL	9	Unmodified	_VVGLMLLLL_					0	0	0			REV__chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1	REV__chr1:160092695-160098409|357|14.82|0.52|4.84|-|2|IGSF8,IGSF8|1	MSMS	GG20161007_CRH_Patient100_W632_01	3	324.2172119021416	3	324.217163	969.629661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.548	1	17.446	16.946	17.946	0.89794								0	0	0	0.42693	1	6881	6881		0	0	1		+		41003	8209	20041	20124	47325	47325					0.14363110655506262
VVGLRLPLG	9	Unmodified	_VVGLRLPLG_					0	0	0			REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	REV__ENST00000392894.7_1_3:149530688-149531075:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	462.3085204958916	2	462.30547	922.596387	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.06	1	103.23	102.73	103.73	0.16445								0	0	0	0.42693	1	43419	43419		0	0	1		+		41004	12805	20042	20125	47326	47326					0.13199244927818654
VVGPAKLG	8	Unmodified	_VVGPAKLG_					0	0	0			REV__IGFN1|p.C894Vfs*30|1|0.1|ENSG00000163395|chr1:201221591-201221592|-/G|frameshift_variant	REV__IGFN1|p.C894Vfs*30|1|0.1|ENSG00000163395|chr1:201221591-201221592|-/G|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1003295779228	2	370.736889	739.459225	0.31265	0.00011591	2.0469	0.00075886	2.3595	0.00087477	370.7375385139502	25.578	0.34002	27.295	27.028	27.368	1.7167					20	10	2	0	0	0	2.3239	1	10682	10682		0	0	1	845730	+		41005	10684	20043	20126	47327	47327					0.07907336048242541
VVGPLTTK	8	Unmodified	_VVGPLTTK_					0	0	0			REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	407.7556030154228	2	407.755278	813.496004	2.1552	0.00087878	-2.9305	-0.0011949	-0.77533	-0.00031614	407.75426115360494	61.68	0.55722	62.01	61.796	62.353	0.32974					29	17	3	0	0	0	0.89008	1	25817	25817		2.5775	0	1	938780	+		41006	9800	20044	20127	47328	47328					0.08179587874144545
VVGPLTTK	8	Unmodified	_VVGPLTTK_					0	0	0			REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	REV__nc|ENSG00000130768|Q92485-2|SMPDL3B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	407.755278	813.496004	2.9378	0.0011979	-3.086	-0.0012583	-0.14822	-6.0437E-05	407.75415923725507	60.698	0.4434	62.117	61.933	62.377	1.4196	-0.013132	-0.00016649	NaN	2.5775	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	811120	+		41007	9800	20044	20127							0.08179587874144545
VVGVRRGR	8	Unmodified	_VVGVRRGR_					0	0	0			REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	449.7898132205009	2	449.78831	897.562067	3.4149	0.001536	-0.23116	-0.00010397	3.1838	0.001432	449.7878906969038	107.64	0.16417	107.8	107.7	107.86	0.15795					13	8	2	0	0	0	0.89008	1	46312	46312		2.5775	0	1	20737000	+		41008	12770	20045	20128	47329	47329					0.10918841559566772
VVGVRRGR	8	Unmodified	_VVGVRRGR_					0	0	0			REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	449.78831	897.562067	1.1105	0.00049948	2.8987	0.0013038	4.0092	0.0018033	449.78931473120383	107.75	0.20137	107.75	107.6	107.81	0	-0.037876	0.0015713	NaN	2.5775	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24786000	+		41009	12770	20045	20128							0.10918841559566772
VVGVRRGR	8	Unmodified	_VVGVRRGR_					0	0	0			REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	449.78831	897.562067	3.2918	0.0014806	0.91292	0.00041062	4.2047	0.0018912	449.78863347748427	107.72	0.20026	107.77	107.66	107.86	0.052452	-0.010527	-0.00021514	NaN	2.5775	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13278000	+		41010	12770	20045	20128							0.10918841559566772
VVGVRRGR	8	Unmodified	_VVGVRRGR_					0	0	0			REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	449.78831	897.562067	3.3621	0.0015123	1.8471	0.00083079	5.2092	0.002343	449.7884272038509	107.66	0.16289	107.82	107.73	107.9	0.15781	0.032946	0.0006252	NaN	2.5775	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24040000	+		41011	12770	20045	20128							0.10918841559566772
VVGVRRGR	8	Unmodified	_VVGVRRGR_					0	0	0			REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	REV__ENST00000381140.8_3_13:27998732-27999008:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	449.78831	897.562067	3.4149	0.001536	-0.23116	-0.00010397	3.1838	0.001432	449.7878906969038	107.64	0.16417	107.8	107.7	107.86	0.15795	0.015457	-0.0012443	NaN	2.5775	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20737000	+		41012	12770	20045	20128							0.10918841559566772
VVGVSAIY	8	Unmodified	_VVGVSAIY_					0	0	0		nc|ENSG00000101307|O00241-2|SIRPB1;ENSG00000101307|ENST00000381605|SIRPB1	nc|ENSG00000101307|O00241-2|SIRPB1	nc|ENSG00000101307|O00241-2|SIRPB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.2333862185478	2	404.234179	806.453805	0.34011	0.00013748	-1.8388	-0.00074329	-1.4987	-0.00060581	404.23330427634613	65.895	0.64127	65.895	65.612	66.253	0					48	19	4	0	0	0	0.89176	1	27454	27454		0.79363	0	1	10532000			41013	1335	20046	20129	47330	47330					0.042836124657469554
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.2268554568291	3	422.226326	1263.65715	-0.44213	-0.00018668	1.2892	0.00054435	0.84711	0.00035767	422.22717098747063	11.833	0.49191	11.833	11.665	12.157	0					45	15	5	0	0	0	0.50855	2	4870	4870;4920		19.144	6.288	1	95800000			41014	2709	20047	20130	47331;47332	47331					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	632.8364135622978	2	632.835851	1263.65715	0.75823	0.00047983	0.03331	2.108E-05	0.79154	0.00050091	632.8355897482824	11.833	0.18452	11.833	11.726	11.911	0					13	5	3	0	0	0	0.26505	1	4892	4892		34.932	14.518	1	3234800			41015	2709	20047	20130	47333	47333					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2268554568291	3	422.226326	1263.65715	0.43634	0.00018423	0.10099	4.264E-05	0.53733	0.00022687	422.2265644490538	11.855	0.47038	11.944	11.679	12.15	0.089381					41	14	5	0	0	0	0.16695	2	4911	4867;4911		29.281	13.007	1	34373000			41016	2709	20047	20130	47334;47335	47335					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	316.9215270876884	4	316.921564	1263.65715	-0.54224	-0.00017185	0.46912	0.00014867	-0.073123	-2.3174E-05	316.92173892178664	11.855	0.31059	11.944	11.743	12.054	0.089381					28	9	4	0	0	0	0.32985	1	4924	4924		19.144	3.4053	1	9930000			41017	2709	20047	20130	47336	47336					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	422.2261840701103	3	422.226326	1263.65715	-0.38952	-0.00016446	0.14927	6.3028E-05	-0.24024	-0.00010144	422.22648694689576	11.423	0.37784	12.092	11.887	12.265	0.66934					36	11	4	0	0	0	0.32985	2	4750	4750;4804		19.144	7.6261	1	11513000			41018	2709	20047	20130	47337;47338	47337					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	316.9212219119072	4	316.921564	1263.65715	-1.5867	-0.00050286	0.50863	0.0001612	-1.0781	-0.00034166	316.92171476541625	11.423	0.37784	12.092	11.887	12.265	0.66934					27	11	3	0	0	0	0.32985	1	4751	4751		19.144	0.42272	1	7448500			41019	2709	20047	20130	47339	47339					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	422.2256042361259	3	422.226326	1263.65715	0.056724	2.395E-05	0.31455	0.00013281	0.37127	0.00015676	422.22658069343476	11.259	0.68429	12.021	11.731	12.416	0.76165					44	21	4	0	0	0	0.54794	2	4660	4660;4704		18.34	9.7904	1	9323100			41020	2709	20047	20130	47340;47341	47340					0.0358668544943157
VVHEDQGKKPQ	11	Unmodified	_VVHEDQGKKPQ_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7;nc|ENSG00000136153|Q8WWI1-3|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	632.835851	1263.65715	0.04895	3.0977E-05	0.30968	0.00019598	0.35863	0.00022695	632.836048961499	11.855	0.12338	11.944	11.867	11.99	0.089381	0.055847	0.00021057	NaN	34.932	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457960			41021	2709	20047	20130							0.0358668544943157
VVHHFPEPTIA	11	Unmodified	_VVHHFPEPTIA_					0	0	0			REV__MARS2|p.I469Afs*37|1|0.05|ENSG00000247626|chr2:197706809-197706810|-/GCAACGTGGTGGATCCTAGGACTTGCCTT|frameshift_variant	REV__MARS2|p.I469Afs*37|1|0.05|ENSG00000247626|chr2:197706809-197706810|-/GCAACGTGGTGGATCCTAGGACTTGCCTT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	416.2227355837822	3	416.224146	1245.65061	-0.54758	-0.00022791	-1.2752	-0.00053078	-1.8228	-0.0007587	416.22374467893934	13.336	0.46548	13.336	13.021	13.487	0					25	14	3	0	0	0	0.82685	1	5502	5502		14.218	0	1	1706000	+		41022	11942	20048	20131	47342	47342					0.03760792288721859
VVHRLSSLL	9	Unmodified	_VVHRLSSLL_					0	0	0			REV__ENST00000563196.5_2_16:58714007-58718665:-|nuORF	REV__ENST00000563196.5_2_16:58714007-58718665:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	341.8824035525322	3	341.881831	1022.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.191	1	0.34944	-0.15056	0.84944	0.15844								0	0	0	0.42693	1	78	78		0	0	1		+		41023	13911	20049	20132	47343	47343					0.11325728468204943
VVHRLSSLL	9	Unmodified	_VVHRLSSLL_					0	0	0			REV__ENST00000563196.5_2_16:58714007-58718665:-|nuORF	REV__ENST00000563196.5_2_16:58714007-58718665:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	341.8819763064384	3	341.881831	1022.62366	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.18808	1	0.92387	0.42387	1.4239	0.73579								0	0	0	0.42693	1	76	76		0	0	1		+		41024	13911	20049	20132	47344	47344					0.11325728468204943
VVIAIFAP	8	Unmodified	_VVIAIFAP_					0	0	0		tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	tr|A0A553STX3|A0A553STX3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_05830PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	415.2621642947197	2	415.262739	828.510926	1.9419	0.00080639	-0.15473	-6.4254E-05	1.7872	0.00074214	415.26211582123284	84.856	0.42954	86.015	85.749	86.179	1.159					29	13	3	0	0	0	0.89198	1	35576	35576		0	0	1	2341800			41025	16669	20050	20133	47345	47345					0.08981079742113707
VVIELLFR	8	Unmodified	_VVIELLFR_					0	0	0		nc|ENSG00000084710|Q9Y2G0-2|EFR3B;nc|ENSG00000084710|Q9Y2G0-3|EFR3B;ENSG00000084710|ENST00000403714|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	nc|ENSG00000084710|Q9Y2G0-2|EFR3B	MSMS	GG20161007_CRH_Patient100_W632_02	4	330.2118102908134	3	330.211177	987.611703	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.017	1	21.541	21.041	22.041	1.5237								0	0	0	1.0178	1	8322	8322		0.45834	0	1				41026	1054	20051	20134	47346	47346					0.11740111724986946
VVIFGLLIL	9	Unmodified	_VVIFGLLIL_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	493.8362609744072	2	493.836071	985.65759	3.2982	0.0016288	0.3291	0.00016252	3.6273	0.0017913	493.83620957308693	109.48	0.61218	109.64	109.36	109.98	0.1548					62	24	5	0	0	0	0.85403	2	47455	47455;47520		0	0	1	9311600			41027	16129	20052	20135	47347;47348	47347					0.1641875690725101
VVIGAGEG	8	Unmodified	_VVIGAGEG_					0	0	0			REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.1960937380791	2	351.195054	700.375555	-0.15672	-5.5039E-05	3.4565	0.0012139	3.2998	0.0011589	351.19622889336574	16.788	0.35578	18.09	17.909	18.264	1.3023					15	11	2	0	0	0	0.89176	1	6960	6960		0.79363	0	1	597820	+		41028	14709	20053	20136	47349	47349					0.013381798805312428
VVIGAGEG	8	Unmodified	_VVIGAGEG_					0	0	0			REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	351.195054	700.375555	0.10765	3.7805E-05	4.4831	0.0015745	4.5908	0.0016123	351.19656853683426	17.705	0.37021	17.878	17.769	18.139	0.17285	-0.065674	-1.6894E-05	NaN	0.79363	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	682810	+		41029	14709	20053	20136							0.013381798805312428
VVIGAGEG	8	Unmodified	_VVIGAGEG_					0	0	0			REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	REV__tr|A0A553SFL2|A0A553SFL2_NIACI3-oxoacyl-[acyl-carrier-protein]synthase2OS=NialliacirculansOX=1397GN=fabFPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	351.195054	700.375555	-0.84034	-0.00029512	5.4855	0.0019265	4.6452	0.0016314	351.1969573267451	16.964	0.3556	17.862	17.758	18.113	0.89794	-0.081292	0.00068718	NaN	0.79363	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	982920	+		41030	14709	20053	20136							0.013381798805312428
VVIGGVVAV	9	Unmodified	_VVIGGVVAV_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	812.5232421755791	1	812.524016	811.516739	2.096	0.001703	-1.8444	-0.0014987	0.25154	0.00020438	812.5218722273377	59.736	0.34729	59.736	59.567	59.915	0					31	16	2	0	0	0	0.051525	3	24870	24870;24913;24957		67.413	0	1	7762400			41031	7915	20054	20137	47350;47351;47352	47350					0.10344178253797054
VVIGGVVAV	9	Unmodified	_VVIGGVVAV_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	812.5216552615166	1	812.524016	811.516739	2.4298	0.0019743	-2.2438	-0.0018231	0.18604	0.00015116	812.5218211333453	59.26	0.47543	59.585	59.425	59.901	0.32553					44	23	3	0	0	0	0.035716	3	24796	24796;24834;24888		79.935	12.522	1	7570400			41032	7915	20054	20137	47353;47354;47355	47353					0.10344178253797054
VVIGGVVAV	9	Unmodified	_VVIGGVVAV_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	812.5253784060478	1	812.524016	811.516739	0.24189	0.00019654	0.083656	6.7973E-05	0.32554	0.00026451	812.5239363545303	58.085	0.36983	59.504	59.353	59.722	1.4181					24	14	2	0	0	0	0.051525	3	24313	24313;24358;24409		67.413	0	1	10506000			41033	7915	20054	20137	47356;47357;47358	47356					0.10344178253797054
VVIGGVVAV	9	Unmodified	_VVIGGVVAV_					0	0	0		nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	nc|ENSG00000165949|P40305-1|IFI27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	812.5218383669853	1	812.524016	811.516739	0.090588	7.3605E-05	-0.58265	-0.00047342	-0.49207	-0.00039982	812.5233830067593	57.55	0.34217	59.518	59.387	59.729	1.9684					28	16	2	0	0	0	0.051525	2	24110	24110;24153		67.413	0	1	7820200			41034	7915	20054	20137	47359;47360	47359					0.10344178253797054
VVIGHKLP	8	Unmodified	_VVIGHKLP_					0	0	0			REV__ENSG00000148156|ENST00000374667|ACTL7B	REV__ENSG00000148156|ENST00000374667|ACTL7B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	431.2483093142509	2	431.779088	861.543623	3.2593	0.0014073	-3.637	-0.0015704	-0.37768	-0.00016308	431.77712351678343	107.82	0.12663	107.98	107.86	107.99	0.15781					11	6	2	0	0	0	2.3239	1	46482	46482		0	0	1	15801000	+		41035	10337	20055	20138	47361	47361					0.10731286864972844
VVIGHKLP	8	Unmodified	_VVIGHKLP_					0	0	0			REV__ENSG00000148156|ENST00000374667|ACTL7B	REV__ENSG00000148156|ENST00000374667|ACTL7B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	431.7781860232353	2	431.779088	861.543623	3.2962	0.0014232	-3.575	-0.0015436	-0.27879	-0.00012038	431.777205291407	107.76	0.14709	107.92	107.85	107.99	0.15796					12	7	2	0	0	0	0.89198	1	46404	46404		0	0	1	22974000	+		41036	10337	20055	20138	47362	47362					0.10731286864972844
VVIIVTVLM	9	Unmodified	_VVIIVTVLM_					0	0	0			REV__tr|A0A553SH38|A0A553SH38_NIACISulPfamilyinorganicaniontransporterOS=NialliacirculansOX=1397GN=CEQ21_12060PE=4SV=1	REV__tr|A0A553SH38|A0A553SH38_NIACISulPfamilyinorganicaniontransporterOS=NialliacirculansOX=1397GN=CEQ21_12060PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	329.1573364138603	3	329.548802	985.624575	1.063	0.0003503	-0.85049	-0.00028028	0.21246	7.0017E-05	329.54870533494926	39.838	2.0806	41.148	40.272	42.353	1.3102					124	67	3	0	0	0	0.11957	1	16362	16362		0	0	1	6496300	+		41037	14776	20056	20139	47363	47363					0.13118806792851956
VVIIVTVLM	9	Unmodified	_VVIIVTVLM_					0	0	0			REV__tr|A0A553SH38|A0A553SH38_NIACISulPfamilyinorganicaniontransporterOS=NialliacirculansOX=1397GN=CEQ21_12060PE=4SV=1	REV__tr|A0A553SH38|A0A553SH38_NIACISulPfamilyinorganicaniontransporterOS=NialliacirculansOX=1397GN=CEQ21_12060PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	329.548802	985.624575	0.98611	0.00032497	-0.042781	-1.4098E-05	0.94332	0.00031087	329.5487265819257	38.964	2.3439	40.801	40.241	42.585	1.8366	-0.1736	0.00036103	NaN	0	136	74	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5558700	+		41038	14776	20056	20139							0.13118806792851956
VVIKSVDHEV	10	Unmodified	_VVIKSVDHEV_					0	0	0			REV__tr|A0A553SKE0|A0A553SKE0_NIACIPutativepre-16SrRNAnucleaseOS=NialliacirculansOX=1397GN=ruvXPE=3SV=1	REV__tr|A0A553SKE0|A0A553SKE0_NIACIPutativepre-16SrRNAnucleaseOS=NialliacirculansOX=1397GN=ruvXPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.8168823122978	2	562.819138	1123.62372	2.1011	0.0011825	-3.0552	-0.0017195	-0.95411	-0.00053699	562.8171638858277	73.145	0.38387	73.47	73.308	73.692	0.32494					24	12	3	0	0	0	0.77604	1	30595	30595		14.838	0.93222	1	2612800	+		41039	14951	20057	20140	47364	47364					0.06685683677505949
VVIKSVDHEV	10	Unmodified	_VVIKSVDHEV_					0	0	0			REV__tr|A0A553SKE0|A0A553SKE0_NIACIPutativepre-16SrRNAnucleaseOS=NialliacirculansOX=1397GN=ruvXPE=3SV=1	REV__tr|A0A553SKE0|A0A553SKE0_NIACIPutativepre-16SrRNAnucleaseOS=NialliacirculansOX=1397GN=ruvXPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	562.3442870974541	2	562.819138	1123.62372	2.1011	0.0011825	-3.0552	-0.0017195	-0.95411	-0.00053699	562.8171638858277	73.145	0.38387	73.47	73.308	73.692	0.32494					24	12	3	0	0	0	0.12461	1	30623	30623		14.838	6.245	1	2612800	+		41040	14951	20057	20140	47365	47365					0.06685683677505949
VVIKVLILI	9	Unmodified	_VVIKVLILI_					0	0	0		ENST00000537553.5_1_12:30863433-30867904:-|nuORF	ENST00000537553.5_1_12:30863433-30867904:-|nuORF	ENST00000537553.5_1_12:30863433-30867904:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	505.3733398318291	2	505.372821	1008.73109	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.6	1	101.6	101.1	102.1	0								0	0	0	0.42693	1	42545	42545		0	0	1				41041	7204	20058	20141	47366	47366					0.227073053497179
VVILIVKKSKL	11	Unmodified	_VVILIVKKSKL_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4447509646416	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.97	1	107.03	106.53	107.53	0.052452								0	0	0	0.63775	1	45677	45677		0.26902	0.26902	1				41042	3341	20059	20142	47367	47367					0.25910008878304325
VVILIVKKSKL	11	Unmodified	_VVILIVKKSKL_					0	0	0		nc|ENSG00000152894|Q15262|PTPRK;ENSG00000152894|ENST00000368226|PTPRK;nc|ENSG00000152894|Q15262-3|PTPRK;nc|ENSG00000152894|Q15262-4|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	nc|ENSG00000152894|Q15262|PTPRK	MSMS	GG20161007_CRH_Patient100_A02_02	2	620.4450561404228	2	620.441766	1238.86898	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.24	1	107.29	106.79	107.79	0.052452								0	0	0	0.63775	1	45835	45835		0.26902	0.26902	1				41043	3341	20059	20142	47368	47368					0.25910008878304325
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2747375369072	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.7	1	111.7	111.2	112.2	0								0	0	0	0.66264	1	48307	48307		0	0	1		+		41044	10912	20060	20143	47369	47369					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751037478447	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.82	1	111.82	111.32	112.32	0								0	0	0	0.66264	1	48359	48359		0	0	1		+		41045	10912	20060	20143	47370	47370					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2756530642509	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.08	1	112.08	111.58	112.58	0								0	0	0	0.66264	1	48464	48464		0	0	1		+		41046	10912	20060	20143	47371	47371					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2745239138603	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.47	1	112.47	111.97	112.97	0								0	0	0	0.66264	1	48622	48622		0	0	1		+		41047	10912	20060	20143	47372	47372					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2771484255791	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.75	1	112.75	112.25	113.25	0								0	0	0	0.66264	1	48735	48735		0	0	1		+		41048	10912	20060	20143	47373	47373					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2754699587822	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.98	1	112.98	112.48	113.48	0								0	0	0	0.66264	1	48826	48826		0	0	1		+		41049	10912	20060	20143	47374	47374					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2747985720634	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.21	1	113.21	112.71	113.71	0								0	0	0	0.66264	1	48917	48917		0	0	1		+		41050	10912	20060	20143	47375	47375					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751342654228	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.34	1	113.34	112.84	113.84	0								0	0	0	0.66264	1	48970	48970		0	0	1		+		41051	10912	20060	20143	47376	47376					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751342654228	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.47	1	113.47	112.97	113.97	0								0	0	0	0.66264	1	49022	49022		0	0	1		+		41052	10912	20060	20143	47377	47377					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2743102908134	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.59	1	113.59	113.09	114.09	0								0	0	0	0.66264	1	49071	49071		0	0	1		+		41053	10912	20060	20143	47378	47378					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2748901247978	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.73	1	113.73	113.23	114.23	0								0	0	0	0.66264	1	49125	49125		0	0	1		+		41054	10912	20060	20143	47379	47379					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2744323611259	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.18	1	114.18	113.68	114.68	0								0	0	0	0.66264	1	49308	49308		0	0	1		+		41055	10912	20060	20143	47380	47380					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2750427126884	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.02	1	115.02	114.52	115.52	0								0	0	0	0.66264	1	49644	49644		0	0	1		+		41056	10912	20060	20143	47381	47381					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2743408083916	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.38	1	115.38	114.88	115.88	0								0	0	0	0.66264	1	49792	49792		0	0	1		+		41057	10912	20060	20143	47382	47382					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2751342654228	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116	1	116	115.5	116.5	0								0	0	0	0.66264	1	50049	50049		0	0	1		+		41058	10912	20060	20143	47383	47383					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2740356326103	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.45	1	116.45	115.95	116.95	0								0	0	0	0.66264	1	50233	50233		0	0	1		+		41059	10912	20060	20143	47384	47384					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2776061892509	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.45	1	118.45	117.95	118.95	0								0	0	0	0.66264	1	51038	51038		0	0	1		+		41060	10912	20060	20143	47385	47385					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2745849490166	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.96	1	118.96	118.46	119.46	0								0	0	0	0.66264	1	51244	51244		0	0	1		+		41061	10912	20060	20143	47386	47386					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2750121951103	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.54	1	119.54	119.04	120.04	0								0	0	0	0.66264	1	51476	51476		0	0	1		+		41062	10912	20060	20143	47387	47387					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2744628787041	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.76	1	119.76	119.26	120.26	0								0	0	0	0.66264	1	51568	51568		0	0	1		+		41063	10912	20060	20143	47388	47388					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_01	1	397.2749816775322	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.89	1	119.89	119.39	120.39	0								0	0	0	0.66264	1	51618	51618		0	0	1		+		41064	10912	20060	20143	47389	47389					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_A02_02	2	397.2749816775322	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.14	1	110.19	109.69	110.69	0.048843								0	0	0	0.66264	1	47527	47527		0	0	1		+		41065	10912	20060	20143	47390	47390					0.22019702249826878
VVILLRKLHV	10	Unmodified	_VVILLRKLHV_					0	0	0			REV__ENSG00000168484|ENST00000679463|SFTPC	REV__ENSG00000168484|ENST00000679463|SFTPC	MSMS	GG20161007_CRH_Patient100_W632_02	4	397.2746154665947	3	397.276293	1188.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	120	1	120.15	119.65	120.65	0.1462								0	0	0	0.66264	1	51759	51759		0	0	1		+		41066	10912	20060	20143	47391	47391					0.22019702249826878
VVILQLRRRAT	11	Unmodified	_VVILQLRRRAT_					0	0	0		nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.2898132205009	3	442.289372	1323.84629	3.3832	0.0014964	-1.972	-0.00087221	1.4112	0.00062416	442.62293696500285	105.88	0.1369	106.04	105.96	106.1	0.15859					18	6	4	0	0	0	1.039	1	45190	45190		0.45452	0.29519	1	51237000			41067	7856	20061	20144	47392	47392					0.19731802533397058
VVILQLRRRAT	11	Unmodified	_VVILQLRRRAT_					0	0	0		nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	442.289372	1323.84629	0.89532	0.00039599	-3.7204	-0.0016455	-2.8251	-0.0012495	442.6231018954571	105.95	0.13455	105.95	105.89	106.03	0	-0.038618	-0.0014194	NaN	0.45452	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8257500			41068	7856	20061	20144							0.19731802533397058
VVILQLRRRAT	11	Unmodified	_VVILQLRRRAT_					0	0	0		nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	nc|ENSG00000117090|Q13291-4|SLAMF1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	442.289372	1323.84629	3.2252	0.0014265	-3.9953	-0.0017671	-0.77009	-0.0003406	442.287179784935	105.9	0.12009	105.95	105.9	106.02	0.05455	-0.036238	-0.0017841	NaN	0.45452	12	5	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13599000			41069	7856	20061	20144							0.19731802533397058
VVILVIIFK	9	Unmodified	_VVILVIIFK_					0	0	0			REV__tr|A0A553SNT0|A0A553SNT0_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25020PE=3SV=1	REV__tr|A0A553SNT0|A0A553SNT0_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3690673708916	2	522.364996	1042.71544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.15	1	107.31	106.81	107.81	0.15781								0	0	0	0.42693	1	46015	46015		0.6015	0	1		+		41070	15061	20062	20145	47393	47393					0.19579018832655493
VVILVIIFK	9	Unmodified	_VVILVIIFK_					0	0	0			REV__tr|A0A553SNT0|A0A553SNT0_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25020PE=3SV=1	REV__tr|A0A553SNT0|A0A553SNT0_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_25020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	522.3672973513603	2	522.364996	1042.71544	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.43	1	107.58	107.08	108.08	0.15781								0	0	0	0.42693	1	46206	46206		0.6015	0	1		+		41071	15061	20062	20145	47394	47394					0.19579018832655493
VVILVVIAL	9	Unmodified	_VVILVVIAL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B;CACNA1B|p.Y1583Tfs*63|1|0.07|ENSG00000148408|chr9:138073559-138073559|C/-|frameshift_variant	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.8362609744072	2	469.836071	937.65759	1.6784	0.00078857	-1.9149	-0.00089969	-0.23651	-0.00011112	469.83489167533367	109.19	0.1694	109.19	109.11	109.28	0					12	7	2	0	0	0	0.85403	1	47215	47215		0	0	1	3832600			41072	3210	20063	20146	47395	47395					0.18626756907201525
VVILVVIAL	9	Unmodified	_VVILVVIAL_					0	0	0		nc|ENSG00000148408|Q00975-2|CACNA1B;ENSG00000148408|ENST00000371372|CACNA1B;CACNA1B|p.Y1583Tfs*63|1|0.07|ENSG00000148408|chr9:138073559-138073559|C/-|frameshift_variant	nc|ENSG00000148408|Q00975-2|CACNA1B	nc|ENSG00000148408|Q00975-2|CACNA1B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	469.836071	937.65759	3.4714	0.001631	-3.8936	-0.0018293	-0.42216	-0.00019835	469.8341493448485	109.16	0.23047	109.21	109.08	109.31	0.048843	0.010213	-0.00089763	NaN	0	11	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5548700			41073	3210	20063	20146							0.18626756907201525
VVISLIPLLT	10	Unmodified	_VVISLIPLLT_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	357.1242248415947	3	356.574004	1066.70018	-1.6275	-0.00058033	2.0324	0.0007247	0.4049	0.00014438	356.57447169277003	27.153	0.18651	27.153	27.044	27.231	0					10	5	3	0	0	0	0.12561	1	11308	11308		0.15932	0	1	744670			41074	16129	20064	20147	47396	47396					0.16950107244815626
VVISLIPLLT	10	Unmodified	_VVISLIPLLT_					0	0	0		tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	tr|A0A553SGZ9|A0A553SGZ9_NIACIAI-2EfamilytransporterOS=NialliacirculansOX=1397GN=CEQ21_11875PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	356.574004	1066.70018	0.64098	0.00022856	1.2593	0.00044903	1.9003	0.00067759	356.5742990367927	26.522	0.27175	26.784	26.624	26.896	0.26173	-0.18469	-0.00023941	NaN	0.15932	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1142200			41075	16129	20064	20147							0.16950107244815626
VVITIHSTRK	10	Unmodified	_VVITIHSTRK_					0	0	0			REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1153.707202136517	1	1153.70517	1152.69789	2.7709	0.0031968	-0.76459	-0.00088211	2.0063	0.0023147	1153.7043067675672	107.48	0.17303	107.63	107.53	107.7	0.15781					26	8	4	0	0	0	0.89803	1	46220	46220		0	0	1	108700000	+		41076	14784	20065	20148	47397	47397					0.12765071559670105
VVITIHSTRK	10	Unmodified	_VVITIHSTRK_					0	0	0			REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1153.70517	1152.69789	1.3528	0.0015607	1.7263	0.0019916	3.0791	0.0035524	1153.707754918452	107.52	0.13491	107.52	107.45	107.58	0	-0.061572	0.0023529	NaN	0	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13734000	+		41077	14784	20065	20148							0.12765071559670105
VVITIHSTRK	10	Unmodified	_VVITIHSTRK_					0	0	0			REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	REV__tr|A0A553SHA3|A0A553SHA3_NIACILargeribosomalsubunitproteinuL22OS=NialliacirculansOX=1397GN=rplVPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1153.70517	1152.69789	2.7709	0.0031968	-0.76459	-0.00088211	2.0063	0.0023147	1153.7043067675672	107.48	0.17303	107.63	107.53	107.7	0.15781	0.051021	-0.00052087	NaN	0	26	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	108700000	+		41078	14784	20065	20148							0.12765071559670105
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2671386599541	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.76	1	21.76	21.26	22.26	0								0	0	0	0.66222	1	9049	9049		0.69767	0.24315	1		+		41079	14645	20066	20149	47398	47398					0.1689555795353499
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2671081423759	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.087	1	25.339	24.839	25.839	0.25197								0	0	0	0.66151	1	10473	10473		1.9064	0.1641	1		+		41080	14645	20066	20149	47399	47399					0.1689555795353499
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	413.2664672732353	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.208	1	25.46	24.96	25.96	0.25197								0	0	0	0.66254	1	10524	10524		0.15932	0	1		+		41081	14645	20066	20149	47400	47400					0.1689555795353499
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2662231326103	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.696	1	15.466	14.966	15.966	0.76937								0	0	0	0.66254	1	6108	6108		0.15932	0	1		+		41082	14645	20066	20149	47401	47401					0.1689555795353499
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2668029665947	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.963	1	18.943	18.443	19.443	0.97922								0	0	0	0.66254	1	7478	7478		0.15932	0	1		+		41083	14645	20066	20149	47402	47402					0.1689555795353499
VVITRHTKRK	10	Unmodified	_VVITRHTKRK_					0	0	0			REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	REV__sp|P16770|UL117_HCMVAProteinUL117OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL117PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	413.2654296755791	3	413.266568	1236.77787	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.314	1	21.889	21.389	22.389	1.5748								0	0	0	0.66254	1	8449	8449		0.15932	0	1		+		41084	14645	20066	20149	47403	47403					0.1689555795353499
VVITSIKQL	9	Unmodified	_VVITSIKQL_					0	0	0		ENST00000427960.5_1_2:190332199-190332286:+|nuORF	ENST00000427960.5_1_2:190332199-190332286:+|nuORF	ENST00000427960.5_1_2:190332199-190332286:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.8251830935478	2	500.823692	999.632832	2.997	0.0015009	-0.017894	-8.9617E-06	2.9791	0.001492	500.8238305232613	108.96	0.20507	109.11	109.01	109.22	0.1548					24	9	3	0	0	0	0.77526	1	47133	47133		4.3292	0	1	46668000			41085	6478	20067	20150	47404	47404					0.13300077033841262
VVIVDGVEV	9	Unmodified	_VVIVDGVEV_					0	0	0			REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	REV__tr|A0A7D6VPY5|A0A7D6VPY5_9CLOTCopper-exportingP-typeATPaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20805PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.7736389040947	2	464.771126	927.527698	3.4641	0.00161	0.7915	0.00036787	4.2556	0.0019779	464.77161170259194	60.705	0.34659	62.125	61.903	62.249	1.4196					16	10	2	0	0	0	0.13437	1	25451	25451		40.449	2.2974	1	1453800	+		41086	15367	20068	20151	47405	47405					0.06103535837428353
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1779052615166	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.108	1	81.108	80.608	81.608	0								0	0	0	1.0178	1	33774	33774		0.45834	0	1		+		41087	15655	20069	20152	47406	47406					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1784240603447	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.139	1	88.139	87.639	88.639	0								0	0	0	1.0178	1	36845	36845		0.45834	0	1		+		41088	15655	20069	20152	47407	47407					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1785461306572	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.232	1	88.232	87.732	88.732	0								0	0	0	1.0178	1	36884	36884		0.45834	0	1		+		41089	15655	20069	20152	47408	47408					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1784850955009	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.355	1	88.355	87.855	88.855	0								0	0	0	1.0178	1	36936	36936		0.45834	0	1		+		41090	15655	20069	20152	47409	47409					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1782104372978	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.475	1	88.475	87.975	88.975	0								0	0	0	1.0178	1	36989	36989		0.45834	0	1		+		41091	15655	20069	20152	47410	47410					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1783019900322	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.782	1	89.782	89.282	90.282	0								0	0	0	1.0178	1	37527	37527		0.45834	0	1		+		41092	15655	20069	20152	47411	47411					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1788207888603	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.913	1	89.913	89.413	90.413	0								0	0	0	1.0178	1	37581	37581		0.45834	0	1		+		41093	15655	20069	20152	47412	47412					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1790649294853	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.108	1	90.108	89.608	90.608	0								0	0	0	1.0178	1	37661	37661		0.45834	0	1		+		41094	15655	20069	20152	47413	47413					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1783630251884	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.233	1	90.233	89.733	90.733	0								0	0	0	1.0178	1	37711	37711		0.45834	0	1		+		41095	15655	20069	20152	47414	47414					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1791259646416	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.231	1	92.231	91.731	92.731	0								0	0	0	1.0178	1	38541	38541		0.45834	0	1		+		41096	15655	20069	20152	47415	47415					0.043909729028428046
VVIVHVDY	8	Unmodified	_VVIVHVDY_					0	0	0			REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	REV__tr|A0A7D6ZHZ7|A0A7D6ZHZ7_9CLOTHemeNO-bindingdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01900PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	315.1797668337822	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.217	1	70.087	69.587	70.587	1.87								0	0	0	1.0178	1	28622	28622		0.45834	0	1		+		41097	15655	20069	20152	47416	47416					0.043909729028428046
VVKFQLRKFV	10	Unmodified	_VVKFQLRKFV_					0	0	0			REV__ENST00000545910.1_1_19:45641863-45643897:+|nuORF	REV__ENST00000545910.1_1_19:45641863-45643897:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.9395934939384	3	421.936047	1262.78631	3.0899	0.0013037	4.0641	0.0017148	7.154	0.0030185	421.93829738253925	105.89	0.11795	106.05	105.98	106.1	0.15859					12	5	3	0	0	0	0.89803	1	45218	45218		0.69767	0.19171	1	33750000	+		41098	9152	20070	20153	47417	47417					0.16543111870146276
VVKGRLPQL	9	Unmodified	_VVKGRLPQL_					0	0	0		nc|ENSG00000158941|Q8N163-2|CCAR2;ENSG00000158941|ENST00000308511|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	nc|ENSG00000158941|Q8N163-2|CCAR2	MSMS	GG20161007_CRH_Patient100_A02_02	2	337.2217895388603	3	337.222076	1008.6444	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.071	1	86.323	85.823	86.823	0.25227								0	0	0	0.42693	1	35991	35991		0.26902	0	1				41099	3513	20071	20154	47418	47418					0.14042318847839397
VVKHLIRIK	9	Unmodified	_VVKHLIRIK_					0	0	0		ENST00000465432.1_1_2:99797706-99812165:+|nuORF;ENSG00000185414|ENST00000338148|MRPL30;ENSG00000241962|ENST00000424491|unknown	ENST00000465432.1_1_2:99797706-99812165:+|nuORF	ENST00000465432.1_1_2:99797706-99812165:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3805419802666	2	553.382043	1104.74953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.3	1	102.47	101.97	102.97	0.17032								0	0	0	0.42693	1	43054	43054		0	0	1				41100	4745	20072	20155	47419	47419					0.20134860044231573
VVKIAAATA	9	Unmodified	_VVKIAAATA_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	422.2694274783134	2	422.268553	842.522553	2.5396	0.0010724	-0.83693	-0.00035341	1.7027	0.00071898	422.26867365372374	82.745	0.57966	83.016	82.573	83.152	0.27029					23	18	2	0	0	0	0.85403	1	34586	34586		0	0	1	1255400	+		41101	10488	20073	20156	47420	47420					0.09499276765450304
VVKKKKKK	8	Unmodified	_VVKKKKKK_					0	0	0			REV__ENSG00000103550|ENST00000219837|KNOP1	REV__ENSG00000103550|ENST00000219837|KNOP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	329.2443725466728	3	329.246333	984.717171	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.565	1	89.565	89.065	90.065	0								0	0	0	1.0178	1	37437	37437		0	0	1		+		41102	9113	20074	20157	47421	47421					0.22420072641261868
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	310.2223693728447	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.238	1	97.329	96.829	97.829	0.090881								0	0	0	1.0178	1	40689	40689		0	0	1				41103	6571	20075	20158	47422	47422					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	310.2249633669853	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.586	1	96.007	95.507	96.507	0.4212								0	0	0	1.0178	1	40227	40227		0	0	1				41104	6571	20075	20158	47423	47423					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2224914431572	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.08	1	78.831	78.331	79.331	1.7514								0	0	0	1.0178	1	32327	32327		0	0	1				41105	6571	20075	20158	47424	47424					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2225829958916	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.183	1	78.935	78.435	79.435	1.7514								0	0	0	1.0178	1	32369	32369		0	0	1				41106	6571	20075	20158	47425	47425					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2223998904228	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.278	1	79.03	78.53	79.53	1.7514								0	0	0	1.0178	1	32408	32408		0	0	1				41107	6571	20075	20158	47426	47426					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2226135134697	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.373	1	79.124	78.624	79.624	1.7514								0	0	0	1.0178	1	32447	32447		0	0	1				41108	6571	20075	20158	47427	47427					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2224914431572	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.474	1	79.225	78.725	79.725	1.7514								0	0	0	1.0178	1	32488	32488		0	0	1				41109	6571	20075	20158	47428	47428					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2225524783134	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.144	1	85.781	85.281	86.281	1.6379								0	0	0	1.0178	1	35289	35289		0	0	1				41110	6571	20075	20158	47429	47429					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2222778201103	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.258	1	85.854	85.354	86.354	1.5962								0	0	0	1.0178	1	35339	35339		0	0	1				41111	6571	20075	20158	47430	47430					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2228576540947	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.369	1	85.965	85.465	86.465	1.5962								0	0	0	1.0178	1	35386	35386		0	0	1				41112	6571	20075	20158	47431	47431					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229186892509	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.491	1	86.087	85.587	86.587	1.5962								0	0	0	1.0178	1	35438	35438		0	0	1				41113	6571	20075	20158	47432	47432					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2238952517509	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.177	1	89.623	89.123	90.123	1.4467								0	0	0	1.0178	1	37164	37164		0	0	1				41114	6571	20075	20158	47433	47433					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2235290408134	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.271	1	89.718	89.218	90.218	1.4467								0	0	0	1.0178	1	37203	37203		0	0	1				41115	6571	20075	20158	47434	47434					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231017947197	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.366	1	89.813	89.313	90.313	1.4467								0	0	0	1.0178	1	37242	37242		0	0	1				41116	6571	20075	20158	47435	47435					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2233154177666	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.461	1	89.908	89.408	90.408	1.4467								0	0	0	1.0178	1	37281	37281		0	0	1				41117	6571	20075	20158	47436	47436					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2236816287041	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.557	1	90.004	89.504	90.504	1.4467								0	0	0	1.0178	1	37320	37320		0	0	1				41118	6571	20075	20158	47437	47437					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2233154177666	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.653	1	90.1	89.6	90.6	1.4467								0	0	0	1.0178	1	37359	37359		0	0	1				41119	6571	20075	20158	47438	47438					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2233764529228	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.75	1	90.197	89.697	90.697	1.4467								0	0	0	1.0178	1	37398	37398		0	0	1				41120	6571	20075	20158	47439	47439					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2232543826103	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.847	1	90.294	89.794	90.794	1.4467								0	0	0	1.0178	1	37437	37437		0	0	1				41121	6571	20075	20158	47440	47440					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231628298759	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.943	1	90.389	89.889	90.889	1.4467								0	0	0	1.0178	1	37476	37476		0	0	1				41122	6571	20075	20158	47441	47441					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2234069705009	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.039	1	90.482	89.982	90.982	1.4436								0	0	0	1.0178	1	37515	37515		0	0	1				41123	6571	20075	20158	47442	47442					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231628298759	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.135	1	90.539	90.039	91.039	1.4045								0	0	0	1.0178	1	37554	37554		0	0	1				41124	6571	20075	20158	47443	47443					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229492068291	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.32	1	90.724	90.224	91.224	1.4045								0	0	0	1.0178	1	37633	37633		0	0	1				41125	6571	20075	20158	47444	47444					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2234680056572	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.413	1	90.817	90.317	91.317	1.4045								0	0	0	1.0178	1	37672	37672		0	0	1				41126	6571	20075	20158	47445	47445					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229492068291	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.506	1	90.911	90.411	91.411	1.4045								0	0	0	1.0178	1	37710	37710		0	0	1				41127	6571	20075	20158	47446	47446					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2227355837822	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.601	1	91.006	90.506	91.506	1.4045								0	0	0	1.0178	1	37749	37749		0	0	1				41128	6571	20075	20158	47447	47447					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231323122978	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.697	1	91.101	90.601	91.601	1.4045								0	0	0	1.0178	1	37789	37789		0	0	1				41129	6571	20075	20158	47448	47448					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231933474541	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.791	1	91.196	90.696	91.696	1.4045								0	0	0	1.0178	1	37827	37827		0	0	1				41130	6571	20075	20158	47449	47449					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231017947197	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.886	1	91.291	90.791	91.791	1.4045								0	0	0	1.0178	1	37866	37866		0	0	1				41131	6571	20075	20158	47450	47450					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2232238650322	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.983	1	91.388	90.888	91.888	1.4045								0	0	0	1.0178	1	37905	37905		0	0	1				41132	6571	20075	20158	47451	47451					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229797244072	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.071	1	91.475	90.975	91.975	1.4045								0	0	0	1.0178	1	37942	37942		0	0	1				41133	6571	20075	20158	47452	47452					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2227355837822	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.389	1	94.666	94.166	95.166	1.277								0	0	0	1.0178	1	39296	39296		0	0	1				41134	6571	20075	20158	47453	47453					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2224914431572	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.49	1	94.767	94.267	95.267	1.277								0	0	0	1.0178	1	39338	39338		0	0	1				41135	6571	20075	20158	47454	47454					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229797244072	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.636	1	94.913	94.413	95.413	1.277								0	0	0	1.0178	1	39400	39400		0	0	1				41136	6571	20075	20158	47455	47455					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2227355837822	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.759	1	95.036	94.536	95.536	1.277								0	0	0	1.0178	1	39452	39452		0	0	1				41137	6571	20075	20158	47456	47456					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2225524783134	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.947	1	95.136	94.636	95.636	1.1887								0	0	0	1.0178	1	39530	39530		0	0	1				41138	6571	20075	20158	47457	47457					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2227661013603	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.069	1	95.258	94.758	95.758	1.1887								0	0	0	1.0178	1	39580	39580		0	0	1				41139	6571	20075	20158	47458	47458					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231017947197	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.169	1	95.358	94.858	95.858	1.1887								0	0	0	1.0178	1	39620	39620		0	0	1				41140	6571	20075	20158	47459	47459					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2228576540947	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.268	1	95.457	94.957	95.957	1.1887								0	0	0	1.0178	1	39659	39659		0	0	1				41141	6571	20075	20158	47460	47460					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2226135134697	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.456	1	95.645	95.145	96.145	1.1887								0	0	0	1.0178	1	39738	39738		0	0	1				41142	6571	20075	20158	47461	47461					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2227966189384	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.577	1	95.765	95.265	96.265	1.1887								0	0	0	1.0178	1	39789	39789		0	0	1				41143	6571	20075	20158	47462	47462					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2226745486259	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.716	1	95.905	95.405	96.405	1.1887								0	0	0	1.0178	1	39848	39848		0	0	1				41144	6571	20075	20158	47463	47463					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2229797244072	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.819	1	96.007	95.507	96.507	1.1887								0	0	0	1.0178	1	39891	39891		0	0	1				41145	6571	20075	20158	47464	47464					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2230407595634	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.938	1	96.126	95.626	96.626	1.1887								0	0	0	1.0178	1	39941	39941		0	0	1				41146	6571	20075	20158	47465	47465					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2235900759697	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.063	1	96.252	95.752	96.752	1.1887								0	0	0	1.0178	1	39997	39997		0	0	1				41147	6571	20075	20158	47466	47466					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2231933474541	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.159	1	95.561	95.061	96.061	0.40208								0	0	0	1.0178	1	40037	40037		0	0	1				41148	6571	20075	20158	47467	47467					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2230407595634	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.309	1	95.711	95.211	96.211	0.40208								0	0	0	1.0178	1	40100	40100		0	0	1				41149	6571	20075	20158	47468	47468					0.18136988621688488
VVKKLKLT	8	Unmodified	_VVKKLKLT_					0	0	0		ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	ENST00000443754.1_1_9:67328347-67334199:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	310.2244140505791	3	310.223306	927.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.418	1	95.82	95.32	96.32	0.40208								0	0	0	1.0178	1	40147	40147		0	0	1				41150	6571	20075	20158	47469	47469					0.18136988621688488
VVKKVQKL	8	Unmodified	_VVKKVQKL_					0	0	0		ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	ENSG00000188738|ENST00000424728|FSIP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	471.3321105837822	2	471.328945	940.643337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.34	1	109.5	109	110	0.1548								0	0	0	1.0178	1	47391	47391		0.69038	0	1				41151	4875	20076	20159	47470	47470					0.17064104478936315
VVKLAVKTA	9	Unmodified	_VVKLAVKTA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	928.6205322146416	1	928.618979	927.611703	2.8006	0.0026007	-0.86001	-0.00079862	1.9406	0.0018021	928.6179073044298	107.73	0.23769	107.78	107.64	107.88	0.052452					46	12	5	0	0	0	0.85019	1	46106	46106		0.52476	0	1	1200500000	+		41152	11085	20077	20160	47471	47471					0.1450011172497625
VVKLAVKTA	9	Unmodified	_VVKLAVKTA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.6194946169853	1	928.618979	927.611703	3.3361	0.0030979	-1.9646	-0.0018244	1.3714	0.0012736	928.6168868375767	107.71	0.21825	107.87	107.73	107.95	0.15781					46	11	5	0	0	0	0.85019	1	46352	46352		0.52476	0	1	3634299999.9999995	+		41153	11085	20077	20160	47472	47472					0.1450011172497625
VVKLAVKTA	9	Unmodified	_VVKLAVKTA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.6202880740166	1	928.618979	927.611703	3.3328	0.0030949	-1.8455	-0.0017138	1.4873	0.0013811	928.617321229514	108.33	0.84567	108.49	108.35	109.19	0.15781					61	43	3	0	0	0	0.85019	1	46821	46821		0.52476	0	1	27679000	+		41154	11085	20077	20160	47473	47473					0.1450011172497625
VVKLAVKTA	9	Unmodified	_VVKLAVKTA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	928.618979	927.611703	1.1427	0.0010612	0.49855	0.00046297	1.6413	0.0015241	928.6190262120907	108.36	0.15721	108.36	108.26	108.42	0	-0.063676	0.0012697	NaN	0.52476	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7310300	+		41155	11085	20077	20160							0.1450011172497625
VVKLAVKTA	9	Unmodified	_VVKLAVKTA_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	928.618979	927.611703	3.3328	0.0030949	-1.8455	-0.0017138	1.4873	0.0013811	928.617321229514	108.33	0.84567	108.49	108.35	109.19	0.15781	0.063676	-0.00090704	NaN	0.52476	61	43	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	27679000	+		41156	11085	20077	20160							0.1450011172497625
VVKLGIVGV	9	Unmodified	_VVKLGIVGV_					0	0	0			REV__tr|A0A553SN81|A0A553SN81_NIACIQacEfamilyquaternaryammoniumcompoundeffluxSMRtransporterOS=NialliacirculansOX=1397GN=CEQ21_23940PE=3SV=1	REV__tr|A0A553SN81|A0A553SN81_NIACIQacEfamilyquaternaryammoniumcompoundeffluxSMRtransporterOS=NialliacirculansOX=1397GN=CEQ21_23940PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.3033630251884	2	442.302396	882.590239	2.2327	0.00098752	0.3801	0.00016812	2.6128	0.0011556	442.3022195577434	49.423	0.42974	50.814	50.612	51.042	1.3911					26	13	3	0	0	0	0.12174	1	20735	20735		42.095	4.1206	1	2454800	+		41157	15045	20078	20161	47474	47474					0.1442472669629069
VVKNGAAP	8	Unmodified	_VVKNGAAP_					0	0	0		ENST00000570265.5_1_15:36871929-37039277:+|nuORF;ENSG00000186073|ENST00000566621|CDIN1	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	755.4422485232353	1	755.441015	754.433738	2.7287	0.0020614	-0.059296	-4.4795E-05	2.6694	0.0020166	755.440485013483	107.76	0.17848	107.81	107.73	107.91	0.052452					18	9	3	0	0	0	0.89178	1	46199	46199		0.69038	0	1	32648000			41158	7387	20079	20162	47475	47475					0.04669861525792385
VVKNKIAL	8	Unmodified	_VVKNKIAL_					0	0	0			REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.8007385134697	2	442.80002	883.585488	0.9131	0.00040432	-1.0801	-0.00047826	-0.16698	-7.3938E-05	442.8005911034658	107.8	0.28372	107.8	107.67	107.95	0					51	15	5	0	0	0	0.89198	1	46341	46341		0	0	1	1656499999.9999998	+		41159	15651	20080	20163	47476	47476					0.13903842553486356
VVKNKIAL	8	Unmodified	_VVKNKIAL_					0	0	0			REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.8007079958916	2	442.80002	883.585488	3.2307	0.0014306	-3.184	-0.0014099	0.046668	2.0665E-05	442.79951230373933	107.8	0.23506	107.85	107.71	107.95	0.052452					47	12	5	0	0	0	0.89198	1	46219	46219		0	0	1	1309800000	+		41160	15651	20080	20163	47477	47477					0.13903842553486356
VVKNKIAL	8	Unmodified	_VVKNKIAL_					0	0	0			REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5936767458916	1	884.592764	883.585488	3.0212	0.0026726	-1.9247	-0.0017026	1.0965	0.00096996	884.5908208839204	107.75	0.23689	107.91	107.79	108.03	0.15781					48	12	5	0	0	0	0.89198	1	46447	46447		0	0	1	4891900000	+		41161	15651	20080	20163	47478	47478					0.13903842553486356
VVKNKIAL	8	Unmodified	_VVKNKIAL_					0	0	0			REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	REV__tr|A0A7D6ZHF7|A0A7D6ZHF7_9CLOTOFAfamilyMFStransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22950PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	443.2055847048759	2	442.80002	883.585488	3.3674	0.0014911	-2.8705	-0.0012711	0.49691	0.00022003	442.79811753904175	105.98	0.099472	106.14	106.07	106.17	0.16174					9	4	3	0	0	0	2.3239	1	45165	45165		0.69038	0	1	16427000	+		41162	15651	20080	20163	47479	47479					0.13903842553486356
VVKRAVERRK	10	Unmodified	_VVKRAVERRK_					0	0	0		nc|ENSG00000162894|O60667-2|FCMR;ENSG00000162894|ENST00000367091|FCMR	nc|ENSG00000162894|O60667-2|FCMR	nc|ENSG00000162894|O60667-2|FCMR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	311.1339599490166	4	310.95447	1239.78877	0.1706	5.305E-05	-1.5465	-0.00048088	-1.3759	-0.00042783	311.2053965681524	31.788	0.40075	33.612	33.33	33.73	1.8246					20	15	2	0	0	0	0.12561	1	13346	13346		0.15932	0	1	1312700			41163	3652	20081	20164	47480	47480					0.17846960327801753
VVKRLLKLI	9	Unmodified	_VVKRLLKLI_					0	0	0		tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	tr|A0A7D6ZMX2|A0A7D6ZMX2_9CLOTSucrosephosphorylaseOS=ClostridiumintestinaleOX=36845GN=gtfAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3955566287041	2	541.394619	1080.77469	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.58	1	106.64	106.14	107.14	0.05455								0	0	0	0.42693	1	45439	45439		0	0	1				41164	17115	20082	20165	47481	47481					0.23752914846841122
VVKVPHKL	8	Unmodified	_VVKVPHKL_					0	0	0		ENST00000256951.9_1_12:13368336-13368474:+|nuORF	ENST00000256951.9_1_12:13368336-13368474:+|nuORF	ENST00000256951.9_1_12:13368336-13368474:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.2075378298759	3	307.207767	918.601472	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.532	1	23.148	22.648	23.648	1.6158								0	0	0	1.0178	1	8977	8977		0	0	1				41165	5600	20083	20166	47482	47482					0.13891548790400066
VVLAHLRP	8	Unmodified	_VVLAHLRP_					0	0	0			REV__nc|ENSG00000213995|Q8IW45-4|NAXD	REV__nc|ENSG00000213995|Q8IW45-4|NAXD	MSMS	GG20161007_CRH_Patient100_A02_02	2	302.1960937380791	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.62	1	35.919	35.419	36.419	0.29942								0	0	0	1.0178	1	14968	14968		0.40072	0	1		+		41166	11845	20084	20167	47483	47483					0.10978091613549168
VVLGGLALGL	10	Unmodified	_VVLGGLALGL_					0	0	0			REV__ENST00000571707.1_1_17:79609405-79612656:+|nuORF	REV__ENST00000571707.1_1_17:79609405-79612656:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3011962771416	2	456.299853	910.585153	3.3619	0.001534	-0.94167	-0.00042969	2.4202	0.0011043	456.2996140620552	107.71	0.27245	107.87	107.72	107.99	0.15781					60	14	6	0	0	0	0.89803	1	46420	46420		0	0	1	13685000000	+		41167	11356	20085	20168	47484	47484					0.12628422833631703
VVLGIPGR	8	Unmodified	_VVLGIPGR_					0	0	0			REV__ENSG00000159495|ENST00000452443|TGM7	REV__ENSG00000159495|ENST00000452443|TGM7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	810.5207397341728	1	810.519599	809.512323	2.9271	0.0023725	-0.82675	-0.0006701	2.1003	0.0017024	810.519638370289	107.71	0.18461	107.87	107.75	107.94	0.15795					17	9	2	0	0	0	0.89178	1	46363	46363		0.69038	0	1	23677000	+		41168	10577	20086	20169	47485	47485					0.09994713830894852
VVLGPPAA	8	Unmodified	_VVLGPPAA_					0	0	0			REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF	REV__ENST00000481801.5_1_2:134877633-135011843:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	362.2231628298759	2	362.223614	722.432676	-0.62538	-0.00022653	-1.3734	-0.00049746	-1.9987	-0.00072399	362.22306996850074	63.817	1.2603	63.817	63.492	64.753	0					87	39	4	0	0	0	0.89198	1	26568	26568		0	0	1	250650000	+		41169	13261	20087	20170	47486	47486					0.060356471568866255
VVLGVGAT	8	Unmodified	_VVLGVGAT_					0	0	0			REV__ENSG00000166428|ENST00000392593|PLD4	REV__ENSG00000166428|ENST00000392593|PLD4	MSMS	GG20161007_CRH_Patient100_W632_01	3	358.2237426638603	2	358.221072	714.42759	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.399	1	91.381	90.881	91.881	0.98157								0	0	0	1.0178	1	38087	38087		0.69038	0	1		+		41170	10823	20088	20171	47487	47487					0.0589534329427579
VVLISVIRKI	10	Unmodified	_VVLISVIRKI_					0	0	0		tr|A0A553SPX7|A0A553SPX7_NIACIPreproteintranslocasesubunitTim44OS=NialliacirculansOX=1397GN=CEQ21_13630PE=4SV=1	tr|A0A553SPX7|A0A553SPX7_NIACIPreproteintranslocasesubunitTim44OS=NialliacirculansOX=1397GN=CEQ21_13630PE=4SV=1	tr|A0A553SPX7|A0A553SPX7_NIACIPreproteintranslocasesubunitTim44OS=NialliacirculansOX=1397GN=CEQ21_13630PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	570.4003784060478	2	570.397359	1138.78016	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.23	1	101.4	100.9	101.9	0.17032								0	0	0	0.66237	1	42595	42595		0.45834	0	1				41171	16488	20089	20172	47488	47488					0.21632593638651088
VVLKKRIAA	9	Unmodified	_VVLKKRIAA_					0	0	0			REV__ENSG00000143878|ENST00000272233|RHOB	REV__ENSG00000143878|ENST00000272233|RHOB	MSMS	GG20161007_CRH_Patient100_A02_02	2	499.3505737185478	2	499.347669	996.680785	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.907	1	97.012	96.512	97.512	0.105								0	0	0	0.42693	1	40551	40551		0	0	1		+		41172	10227	20090	20173	47489	47489					0.18231195744544948
VVLKPPPL	8	Unmodified	_VVLKPPPL_					0	0	0		ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	431.2635986208916	2	431.791664	861.568775	0.59767	0.00025807	-0.080247	-3.465E-05	0.51742	0.00022342	431.79119509701053	103.21	0.30435	103.21	102.99	103.29	0					21	11	3	0	0	0	2.3239	1	43315	43315		0	0	1	2080800			41173	1818	20091	20174	47490	47490					0.13245341667550292
VVLKPPPL	8	Unmodified	_VVLKPPPL_					0	0	0		ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	431.2649719119072	2	431.791664	861.568775	3.2621	0.0014085	-3.9348	-0.001699	-0.67273	-0.00029048	431.79008345796484	103.13	0.084953	103.29	103.24	103.32	0.16446					4	2	2	0	0	0	2.3239	1	43460	43460		0	0	1	220300			41174	1818	20091	20174	47491	47491					0.13245341667550292
VVLKPPPL	8	Unmodified	_VVLKPPPL_					0	0	0		ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	ENSG00000113356|ENST00000651687|POLR3G	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	431.791664	861.568775	3.1291	0.0013511	-1.9285	-0.00083272	1.2006	0.0005184	431.79027735130563	103.19	0.22878	103.25	103.04	103.27	0.059502	0.00016164	7.0344E-05	NaN	0	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1470300			41175	1818	20091	20174							0.13245341667550292
VVLKVLRRK	9	Unmodified	_VVLKVLRRK_					0	0	0			REV__ENST00000588356.1_1_19:2235749-2236304:-|nuORF	REV__ENST00000588356.1_1_19:2235749-2236304:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	555.3235351443291	2	555.895318	1109.77608	3.1031	0.001725	-3.7189	-0.0020673	-0.61579	-0.00034232	555.8934879158599	101.71	0.096291	101.88	101.8	101.89	0.17032					4	2	2	0	0	0	0.11957	1	42770	42770		0	0	1	1093800	+		41176	9155	20092	20175	47492	47492					0.2255854893560354
VVLKVLRRK	9	Unmodified	_VVLKVLRRK_					0	0	0			REV__ENST00000588356.1_1_19:2235749-2236304:-|nuORF	REV__ENST00000588356.1_1_19:2235749-2236304:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	555.895318	1109.77608	0.72276	0.00040178	-7.2104	-0.0040082	-6.4877	-0.0036065	555.8913428328058	101.82	0.090714	101.82	101.77	101.86	0	-0.024931	-0.00011194	NaN	0	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	876530	+		41177	9155	20092	20175							0.2255854893560354
VVLLKKAN	8	Unmodified	_VVLLKKAN_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.7989684939384	2	442.80002	883.585488	3.3805	0.0014969	-3.0077	-0.0013318	0.37274	0.00016505	442.79799311057997	105.99	0.099251	106.15	106.1	106.2	0.15859					8	4	2	0	0	0	0.89176	1	45287	45287		0.79363	0	1	21873000			41178	4732	20093	20176	47493	47493					0.13903842553497725
VVLLKKAN	8	Unmodified	_VVLLKKAN_					0	0	0		ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	ENSG00000185052|ENST00000328041|SLC24A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	442.8010742068291	2	442.80002	883.585488	3.3806	0.0014969	-0.61702	-0.00027322	2.7636	0.0012237	442.79974873687365	106.15	0.18124	106.31	106.23	106.41	0.15781					34	9	5	0	0	0	0.89176	1	45456	45456		0.79363	0	1	569140000			41179	4732	20093	20176	47494	47494					0.13903842553497725
VVLLLLKN	8	Unmodified	_VVLLLLKN_					0	0	0			REV__ENST00000398985.1_1_17:25887428-25904874:+|nuORF	REV__ENST00000398985.1_1_17:25887428-25904874:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3160888552666	2	456.318046	910.621539	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.88	1	98.88	98.38	99.38	0								0	0	0	1.0178	1	41373	41373		0.79363	0	1		+		41180	12874	20094	20177	47495	47495					0.1626529973035531
VVLLLLPK	8	Unmodified	_VVLLLLPK_					0	0	0			REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	894.6378661990166	1	894.638652	893.631375	1.1452	0.0010246	-2.1545	-0.0019275	-1.0093	-0.00090292	894.636585227429	109.26	0.20191	109.26	109.17	109.37	0					15	8	3	0	0	0	0.89198	1	47252	47252		0	0	1	14477000	+		41181	14132	20095	20178	47496	47496					0.18030487735734368
VVLLLLPK	8	Unmodified	_VVLLLLPK_					0	0	0			REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	894.638652	893.631375	1.1452	0.0010246	-2.1545	-0.0019275	-1.0093	-0.00090292	894.636585227429	109.26	0.20191	109.26	109.17	109.37	0	-0.012582	-7.4423E-05	NaN	0	15	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14477000	+		41182	14132	20095	20178							0.18030487735734368
VVLLLLPK	8	Unmodified	_VVLLLLPK_					0	0	0			REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	REV__ENST00000604516.1_1_6:79943924-79944071:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	894.638652	893.631375	2.8095	0.0025135	-1.4761	-0.0013205	1.3335	0.001193	894.6365027576752	109.24	0.2548	109.29	109.13	109.38	0.048843	0.012582	0.00053252	NaN	0	12	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3406900	+		41183	14132	20095	20178							0.18030487735734368
VVLLLPLA	8	Unmodified	_VVLLLPLA_					0	0	0		nc|ENSG00000204842|Q99700-2|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2	nc|ENSG00000204842|Q99700-2|ATXN2	nc|ENSG00000204842|Q99700-2|ATXN2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	419.1715881228447	2	419.29404	836.573526	3.4017	0.0014263	-3.7935	-0.0015906	-0.39188	-0.00016431	419.2922146108628	98.687	0.23438	98.914	98.84	99.074	0.22776					10	7	2	0	0	0	2.3239	1	41524	41524		0	0	1	2079200			41184	7981	20096	20179	47497	47497					0.14870225810307147
VVLLLPLA	8	Unmodified	_VVLLLPLA_					0	0	0		nc|ENSG00000204842|Q99700-2|ATXN2;nc|ENSG00000204842|Q99700-4|ATXN2;nc|ENSG00000204842|Q99700|ATXN2	nc|ENSG00000204842|Q99700-2|ATXN2	nc|ENSG00000204842|Q99700-2|ATXN2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	419.29404	836.573526	0.28889	0.00012113	-7.2703	-0.0030484	-6.9815	-0.0029273	419.29074495637747	98.914	0.2579	98.914	98.821	99.079	0	-0.00015627	-0.001198	NaN	0	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4937700			41185	7981	20096	20179							0.14870225810307147
VVLPICLP	8	Unmodified	_VVLPICLP_					0	0	0			REV__ENST00000337318.7_2_10:126311255-126311537:-|nuORF	REV__ENST00000337318.7_2_10:126311255-126311537:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	427.7548705935478	2	427.264425	852.514297	1.1474	0.00049025	-2.647	-0.001131	-1.4996	-0.00064074	427.2639434827912	77.432	0.27934	79.183	79.041	79.32	1.7514					12	8	2	0	0	0	2.3239	1	32441	32441		0.79363	0	1	1020800	+		41186	12474	20097	20180	47498	47498					0.08214006524474371
VVLPQIHTV	9	Unmodified	_VVLPQIHTV_					0	0	0		ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	ENSG00000185010|ENST00000360256|F8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3072997927666	2	503.30821	1004.60187	2.3834	0.0011996	-0.43473	-0.0002188	1.9486	0.00098077	503.30771354034454	44.075	0.37542	45.428	45.222	45.597	1.3536					17	11	2	0	0	0	0.32838	1	18448	18448		24.021	8.1734	1	691700			41187	4725	20098	20181	47499	47499					0.09974923719607887
VVLRLRKPK	9	Unmodified	_VVLRLRKPK_					0	0	0			REV__ENSG00000102763|ENST00000379310|VWA8	REV__ENSG00000102763|ENST00000379310|VWA8	MSMS	GG20161007_CRH_Patient100_A02_01	1	370.2585937380791	3	370.260754	1107.76043	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.89	1	107.89	107.39	108.39	0								0	0	0	0.42693	1	46371	46371		0	0	1		+		41188	9080	20099	20182	47500	47500					0.21086262418521073
VVLRRNPR	8	Unmodified	_VVLRRNPR_					0	0	0			REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	REV__nc|ENSG00000138316|Q8WXS8-2|ADAMTS14	MSMS	GG20161007_CRH_Patient100_W632_01	3	337.2184936404228	3	337.217437	1008.63048	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.175	1	21.301	20.801	21.801	1.1254								0	0	0	1.0178	1	8402	8402		0.40072	0	1		+		41189	10056	20100	20183	47501	47501					0.12651086139408108
VVLRSLHRV	9	Unmodified	_VVLRSLHRV_					0	0	0		nc|ENSG00000114654|Q9HA90|EFCC1;ENSG00000114654|ENST00000683648|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.2330810427666	3	360.232975	1077.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.706	1	60.706	60.206	61.206	0								0	0	0	0.42693	1	25314	25314		0.26902	0	1				41190	1876	20101	20184	47502	47502					0.14136525970684488
VVLRSLHRVR	10	Unmodified	_VVLRSLHRVR_					0	0	0		nc|ENSG00000114654|Q9HA90|EFCC1;ENSG00000114654|ENST00000683648|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	nc|ENSG00000114654|Q9HA90|EFCC1	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.2650329470634	3	412.266679	1233.77821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	42.873	1	44.213	43.713	44.713	1.3399								0	0	0	0.66218	1	17970	17970		0.77653	0	1				41191	1876	20102	20185	47503	47503					0.17066977673403017
VVMLIFIGI	9	Unmodified	_VVMLIFIGI_					0	0	0		tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	tr|A0A7D6VQT8|A0A7D6VQT8_9CLOTTranscriptionalregulatorGutMOS=ClostridiumintestinaleOX=36845GN=HZF06_22685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.8147765994072	2	502.814282	1003.61401	2.0321	0.0010218	-1.7529	-0.00088136	0.27923	0.0001404	502.8134541028111	81.541	1.0218	81.541	81.133	82.154	0					97	33	5	0	0	0	0.84963	1	33863	33863		0.6015	0	1	265370000			41192	16809	20103	20186	47504	47504					0.11234824138421118
VVMVPISL	8	Unmodified	_VVMVPISL_					0	0	0			REV__nc|ENSG00000182087|Q4ZIN3-2|TMEM259	REV__nc|ENSG00000182087|Q4ZIN3-2|TMEM259	MSMS	GG20161007_CRH_Patient100_A02_02	2	429.1925536990166	2	429.261882	856.509211	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.12	1	105.17	104.67	105.67	0.056801								0	0	0	1.0178	1	44495	44495		2.3027	0	1		+		41193	11337	20104	20187	47505	47505					0.07521702661881591
VVMWIILAH	9	Unmodified	_VVMWIILAH_					0	0	0		nc|ENSG00000115353|P25103-3|TACR1;ENSG00000115353|ENST00000305249|TACR1	nc|ENSG00000115353|P25103-3|TACR1	nc|ENSG00000115353|P25103-3|TACR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1081.628344714642	1	1081.62268	1080.61541	3.4985	0.0037841	0.37088	0.00040115	3.8694	0.0041852	1081.622296970594	107.55	0.15186	107.7	107.6	107.75	0.15795					17	7	3	0	0	0	0.85403	1	46235	46235		0	0	1	27205000			41194	1913	20105	20188	47506	47506					0.0783245822722165
VVNELVHRWR	10	Unmodified	_VVNELVHRWR_					0	0	0		ENST00000569236.5_1_16:27253049-27253106:-|nuORF	ENST00000569236.5_1_16:27253049-27253106:-|nuORF	ENST00000569236.5_1_16:27253049-27253106:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	654.3690063357353	2	654.370195	1306.72584	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.39	1	103.39	102.89	103.89	0								0	0	0	0.6624	1	43386	43386		0.40072	0	1				41195	7381	20106	20189	47507	47507					0.08474394539780405
VVNKGLTP	8	Unmodified	_VVNKGLTP_					0	0	0			REV__nc|ENSG00000065911|P13995-2|MTHFD2	REV__nc|ENSG00000065911|P13995-2|MTHFD2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	827.5016967654228	1	827.498529	826.491253	1.7328	0.0014339	1.6469	0.0013628	3.3797	0.0027967	827.4999590001303	51.675	0.24981	52	51.85	52.1	0.32553					12	7	2	0	0	0	0.76103	1	21626	21626		24.674	0	1	513920	+		41196	8679	20107	20190	47508	47508					0.07106703731381003
VVNLPITL	8	Unmodified	_VVNLPITL_					0	0	0			REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	434.7804748415947	2	434.778754	867.542954	0.8809	0.000383	3.6875	0.0016033	4.5684	0.0019862	434.78028688574307	29.735	0.76332	31.534	31.112	31.875	1.7987					33	24	2	0	0	0	0.89178	1	12491	12491		0.69038	0	1	1351900	+		41197	13360	20108	20191	47509	47509					0.10388447425293634
VVNLPITL	8	Unmodified	_VVNLPITL_					0	0	0			REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	434.778754	867.542954	0.78041	0.00033931	5.5249	0.0024021	6.3053	0.0027414	434.78113714285433	31.243	0.82107	31.243	30.682	31.503	0	-0.2146	0.00028655	NaN	0.69038	40	26	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	602230	+		41198	13360	20108	20191							0.10388447425293634
VVNLPITL	8	Unmodified	_VVNLPITL_					0	0	0			REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	REV__ENST00000481603.1_1_11:5626782-5632007:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	434.778754	867.542954	0.95943	0.00041714	5.5364	0.0024071	6.4958	0.0028242	434.78093105414666	30.314	1.0558	31.597	31.256	32.312	1.2825	0.13879	0.00029649	NaN	0.69038	50	33	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	965670	+		41199	13360	20108	20191							0.10388447425293634
VVNSIVVIL	9	Unmodified	_VVNSIVVIL_					0	0	0			REV__tr|A0A7D6ZYI8|A0A7D6ZYI8_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02830PE=4SV=1	REV__tr|A0A7D6ZYI8|A0A7D6ZYI8_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02830PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	478.3141052126884	2	478.312961	954.611368	1.5499	0.00074135	1.1676	0.00055849	2.7175	0.0012998	478.31349744888826	107.69	0.23924	107.69	107.58	107.82	0					56	12	6	0	0	0	0.85403	1	46262	46262		0	0	1	993310000	+		41200	15779	20109	20192	47510	47510					0.13224692005155703
VVNWWLIYI	9	Unmodified	_VVNWWLIYI_					0	0	0		L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|38|2|anti-sense	L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|38|2|anti-sense	L1MA2_dup458|chr1:227783992-227784718:-|1.1741422800325727|0.4119820528890241|1.51|429.0|38|2|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	603.3408080935478	2	603.33951	1204.66447	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.4	1	26.4	25.9	26.9	0								0	0	0	0.42693	1	11025	11025		2.3027	0.4585	1				41201	7687	20110	20193	47511	47511					0.07032069787828732
VVPDSKKI	8	Unmodified	_VVPDSKKI_					0	0	0			REV__ENSG00000167658|ENST00000309311|EEF2	REV__ENSG00000167658|ENST00000309311|EEF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	443.2735473513603	2	443.273835	884.533118	2.2639	0.0010035	-1.5361	-0.00068093	0.72772	0.00032258	443.2730890217974	67.972	0.4878	69.35	69.035	69.523	1.3778					42	15	4	0	0	0	0.89008	1	28498	28498		2.5775	0	1	7548800	+		41202	10870	20111	20194	47512	47512					0.08623259419891838
VVPFPLLV	8	Unmodified	_VVPFPLLV_					0	0	0		ENSG00000175485|ENST00000311352|OR52W1	ENSG00000175485|ENST00000311352|OR52W1	ENSG00000175485|ENST00000311352|OR52W1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	442.3423950076103	2	442.286214	882.557876	3.2225	0.0014253	1.4793	0.00065427	4.7018	0.0020795	442.28693962536465	99.875	0.092827	99.948	99.9	99.993	0.072716					4	2	2	0	0	0	2.3239	1	41833	41833		0.79363	0	1	1045400			41203	4375	20112	20195	47513	47513					0.11189939293296902
VVPGAAPS	8	Unmodified	_VVPGAAPS_					0	0	0		ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	ENSG00000225614|ENST00000565624|ZNF469	MSMS	GG20161007_CRH_Patient100_A02_02	2	349.1985351443291	2	349.197596	696.38064	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.68	1	103.74	103.24	104.24	0.059502								0	0	0	1.0178	1	43546	43546		2.5775	0	1				41204	5290	20113	20196	47514	47514					0.020304837431467604
VVPGATLRPR	10	Unmodified	_VVPGATLRPR_					0	0	0			REV__ENST00000306801.7_1_17:78938830-78939313:+|nuORF	REV__ENST00000306801.7_1_17:78938830-78939313:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1065.655566394329	1	1065.65274	1064.64546	1.2928	0.0013776	0.89547	0.00095426	2.1882	0.0023319	1065.6540352812615	107.61	0.1733	107.61	107.53	107.7	0					21	8	4	0	0	0	0.89803	1	46156	46156		0	0	1	33402000	+		41205	12342	20114	20197	47515	47515					0.1157253321675853
VVPGRILSF	9	Unmodified	_VVPGRILSF_					0	0	0		ENST00000490952.1_1_3:60522548-60807619:-|nuORF	ENST00000490952.1_1_3:60522548-60807619:-|nuORF	ENST00000490952.1_1_3:60522548-60807619:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3044311404228	2	494.302927	986.591301	1.7569	0.00086843	0.97229	0.0004806	2.7292	0.001349	494.3034819342797	48.171	0.37827	49.559	49.365	49.743	1.388					25	11	3	0	0	0	0.49082	1	20202	20202		15.847	4.2069	1	2103600			41206	6907	20115	20198	47516	47516					0.09746941065191095
VVPHLALP	8	Unmodified	_VVPHLALP_					0	0	0			REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	REV__ENST00000584336.1_1_17:37686825-37687566:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	845.5242797732353	1	845.52435	844.517074	1.2165	0.0010286	-0.7745	-0.00065485	0.44201	0.00037373	845.5232326243201	106.26	0.1337	106.26	106.17	106.31	0					19	6	4	0	0	0	0.89198	1	45284	45284		0	0	1	43714000	+		41207	10859	20116	20199	47517	47517					0.08859597973639666
VVPILKKPL	9	Unmodified	_VVPILKKPL_					0	0	0			REV__tr|A0A7D7A6M7|A0A7D7A6M7_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10870PE=4SV=1	REV__tr|A0A7D7A6M7|A0A7D7A6M7_9CLOTNAD(P)/FAD-dependentoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_10870PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2398254275322	3	336.238956	1005.69504	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.768	1	96.17	95.67	96.67	0.40208								0	0	0	0.42693	1	40292	40292		0	0	1		+		41208	15892	20117	20200	47518	47518					0.1924184817285095
VVPKIINLVED	11	Unmodified	_VVPKIINLVED_					0	0	0			REV__tr|A0A7D6ZVZ3|A0A7D6ZVZ3_9CLOTRodshape-determiningproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06075PE=4SV=1	REV__tr|A0A7D6ZVZ3|A0A7D6ZVZ3_9CLOTRodshape-determiningproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06075PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8707153201103	2	619.871371	1237.72819	2.3481	0.0014556	-2.5532	-0.0015826	-0.20501	-0.00012708	619.8694732461313	78.416	2.6885	79.683	78.777	81.466	1.2668					257	86	5	0	0	0	0.95289	1	32779	32779		12.241	1.4411	1	8928300	+		41209	15739	20118	20201	47519	47519					0.11883385434225602
VVPKLSPLL	9	Unmodified	_VVPKLSPLL_					0	0	0			REV__chr6:7904723-7908706|153|12.88|0.0|20.3|-|1|TE_info:AluJo,AluJo_dup23316,Alu,SINE,donor,+,7908706,7908867|TXNDC5,None|2	REV__chr6:7904723-7908706|153|12.88|0.0|20.3|-|1|TE_info:AluJo,AluJo_dup23316,Alu,SINE,donor,+,7908706,7908867|TXNDC5,None|2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	323.2015258669853	3	322.551311	964.632104	-0.26953	-8.6938E-05	1.2432	0.00040101	0.9737	0.00031407	322.55167122340794	16.484	0.31872	16.635	16.375	16.694	0.15093					17	11	2	0	0	0	0.11957	1	6761	6761		0	0	1	253650	+		41210	8335	20119	20202	47520	47520					0.14837282384814898
VVPKPVVKV	9	Unmodified	_VVPKPVVKV_					0	0	0			REV__ENSG00000187764|ENST00000422704|SEMA4D	REV__ENSG00000187764|ENST00000422704|SEMA4D	MSMS	GG20161007_CRH_Patient100_A02_01	1	322.2229186892509	3	322.223306	963.648088	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.325	1	90.325	89.825	90.825	0								0	0	0	0.42693	1	37749	37749		0	0	1		+		41211	11549	20120	20203	47521	47521					0.16480988621708548
VVPKRVAG	8	Unmodified	_VVPKRVAG_					0	0	0			REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	REV__nc|ENSG00000101191|Q9BTC0-1|DIDO1	MSMS	GG20161007_CRH_Patient100_W632_01	3	413.2692138552666	2	413.268887	824.523222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.2665	1	4.8901	4.3901	5.3901	0.62362								0	0	0	1.0178	1	1761	1761		0.79363	0	1		+		41212	9026	20121	20204	47522	47522					0.1039411620519104
VVPLLIILTL	10	Unmodified	_VVPLLIILTL_					0	0	0			REV__nc|ENSG00000138798|P01133-2|EGF	REV__nc|ENSG00000138798|P01133-2|EGF	MSMS	GG20161007_CRH_Patient100_W632_02	4	365.1934692263603	3	365.258016	1092.75222	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.442	1	14.27	13.77	14.77	0.82789								0	0	0	0.66264	1	5573	5573		0	0	1		+		41213	10085	20122	20205	47523	47523					0.2095527065857823
VVPLLKKERAL	11	Unmodified	_VVPLLKKERAL_					0	0	0			REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	REV__ENST00000557366.5_1_14:68270819-68282710:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	633.4195434451103	2	633.418823	1264.82309	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.857	1	71.18	70.68	71.68	0.32359								0	0	0	0.63775	1	29661	29661		0.26902	0.26902	1		+		41214	8732	20123	20206	47524	47524					0.2012736369608774
VVPLPPPTLR	10	Unmodified	_VVPLPPPTLR_					0	0	0		nc|ENSG00000196535|Q92614-3|MYO18A;nc|ENSG00000196535|Q92614-4|MYO18A;ENSG00000196535|ENST00000527372|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	nc|ENSG00000196535|Q92614-3|MYO18A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2524291872978	3	363.565732	1087.67537	-0.33417	-0.00012149	-0.70928	-0.00025787	-1.0434	-0.00037936	363.5653998785801	50.845	0.85645	52.821	52.454	53.311	1.9753					40	31	2	0	0	0	0.1256	1	21503	21503		0.62683	0.22611	1	5277800			41215	4945	20124	20207	47525	47525					0.13503472162074104
VVPLTGHP	8	Unmodified	_VVPLTGHP_					0	0	0		ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	410.2437011599541	2	410.239796	818.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.424	1	95.424	94.924	95.924	0								0	0	0	1.0178	1	39882	39882		2.3027	1.5091	1				41216	6027	20125	20208	47526	47526					0.04854434559899801
VVPLTGHP	8	Unmodified	_VVPLTGHP_					0	0	0		ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2399474978447	2	410.239796	818.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.415	1	93.351	92.851	93.851	0.93623								0	0	0	1.0178	1	38916	38916		2.3027	1.5091	1				41217	6027	20125	20208	47527	47527					0.04854434559899801
VVPLTGHP	8	Unmodified	_VVPLTGHP_					0	0	0		ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	ENST00000360284.7_1_12:52448627-52448831:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	410.2397033572197	2	410.239796	818.465038	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.304	1	94.176	93.676	94.676	0.87176								0	0	0	1.0178	1	39269	39269		2.3027	1.5091	1				41218	6027	20125	20208	47528	47528					0.04854434559899801
VVPPFLQPEV	10	Unmodified	_VVPPFLQPEV_					0	0	0		CON__P02666	CON__P02666	CON__P02666	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	562.8188354372978	2	562.82115	1123.62775	1.3646	0.00076803	-3.9348	-0.0022146	-2.5702	-0.0014465	562.818205948323	73.657	0.45447	73.657	73.433	73.888	0					34	14	3	0	0	0	0.32206	2	30673	30625;30673		37.974	22.127	1	3976500		+	41219	337	20126	20209	47529;47530	47530					0.07087773171224399
VVPQFVVFY	9	Unmodified	_VVPQFVVFY_					0	0	0		ENSG00000164405|ENST00000378670|UQCRQ	ENSG00000164405|ENST00000378670|UQCRQ	ENSG00000164405|ENST00000378670|UQCRQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.3068725466728	2	549.305136	1096.59572	1.7236	0.00094679	1.0175	0.00055892	2.7411	0.0015057	549.3055123021887	83.43	0.69283	84.618	84.326	85.019	1.1879					58	21	4	0	0	0	0.069258	4	35009	34960;35009;35048;35087		60.39	35.716	1	19583000			41220	3776	20127	20210	47531;47532;47533;47534	47532					0.051284054880852636
VVPQFVVFY	9	Unmodified	_VVPQFVVFY_					0	0	0		ENSG00000164405|ENST00000378670|UQCRQ	ENSG00000164405|ENST00000378670|UQCRQ	ENSG00000164405|ENST00000378670|UQCRQ	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.3066894412041	2	549.305136	1096.59572	2.272	0.001248	-0.81145	-0.00044573	1.4606	0.00080231	549.3045748006061	83.014	0.65437	84.652	84.325	84.98	1.6379					56	20	4	0	0	0	0.061246	4	34755	34755;34799;34836;34877		63.563	31.257	1	24212000			41221	3776	20127	20210	47535;47536;47537;47538	47535					0.051284054880852636
VVPRHQLA	8	Unmodified	_VVPRHQLA_					0	0	0			REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	REV__nc|ENSG00000013288|Q9Y2E5-2|MAN2B2	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1878845095634	3	307.187255	918.539935	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.98	1	104.16	103.66	104.66	0.1731								0	0	0	1.0178	1	43912	43912		0.45834	0	1		+		41222	8541	20128	20211	47539	47539					0.07740617091133117
VVPSGGFFPTI	11	Unmodified	_VVPSGGFFPTI_					0	0	0		ENSG00000167778|ENST00000301463|SPRYD3	ENSG00000167778|ENST00000301463|SPRYD3	ENSG00000167778|ENST00000301463|SPRYD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	561.3405029177666	2	560.8055	1119.59645	2.6151	0.0014666	-0.37382	-0.00020964	2.2413	0.0012569	560.8062251235866	76.969	0.50665	78.256	78.069	78.576	1.2871					21	15	2	0	0	0	0.13426	1	32350	32350		29.082	8.628	1	1389200			41223	3994	20129	20212	47540	47540					0.04143200137150416
VVPVGGGG	8	Unmodified	_VVPVGGGG_					0	0	0		ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.3631469607353	1	641.361702	640.354425	2.9917	0.0019188	2.4834	0.0015928	5.4752	0.0035116	641.3627109799445	108.03	0.14487	108.19	108.11	108.26	0.15795					32	20	2	0	0	0	0.89198	1	46542	46542		0	0	1	45997000			41224	3990	20130	20213	47541	47541					0.019862145716729174
VVPVGGGG	8	Unmodified	_VVPVGGGG_					0	0	0		ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	641.361702	640.354425	1.5128	0.00097026	4.6593	0.0029883	6.1721	0.0039585	641.364276524608	108.13	0.17323	108.13	108.03	108.2	0	-0.018584	0.00058069	NaN	0	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	102660000			41225	3990	20130	20213							0.019862145716729174
VVPVGGGG	8	Unmodified	_VVPVGGGG_					0	0	0		ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	ENSG00000167720|ENST00000344595|SRR	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	641.361702	640.354425	2.6619	0.0017072	3.4553	0.0022161	6.1172	0.0039233	641.3638546626072	108.08	0.18658	108.13	108.04	108.23	0.050644	-0.017253	-0.00019146	NaN	0	21	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	104920000			41226	3990	20130	20213							0.019862145716729174
VVPVISVG	8	Unmodified	_VVPVISVG_					0	0	0		VCL-KIAA0913|1|fusion;VCL-KIAA0913|3|fusion;VCL-KIAA0913|2|fusion;ENST00000433366.6_1_10:75557251-75561274:+|nuORF;nc|ENSG00000214655|A7E2V4-5|ZSWIM8;ENSG00000214655|ENST00000604729|ZSWIM8;nc|ENSG00000214655|A7E2V4|ZSWIM8;nc|ENSG00000214655|A7E2V4-3|ZSWIM8;nc|ENSG00000214655|A7E2V4-4|ZSWIM8;nc|ENSG00000214655|A7E2V4-2|ZSWIM8	VCL-KIAA0913|1|fusion	VCL-KIAA0913|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	385.2457153201103	2	385.244547	768.47454	2.7465	0.0010581	0.25826	9.9492E-05	3.0048	0.0011576	385.24470325722655	99.07	0.089348	99.268	99.226	99.315	0.19767					4	2	2	0	0	0	0.89198	1	41712	41712		0	0	1	1434400			41227	17354	20131	20214	47542	47542					0.08104202845447617
VVPVKIPRE	9	Unmodified	_VVPVKIPRE_					0	0	0			REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2221557497978	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.3	1	79.3	78.8	79.8	0								0	0	0	0.42693	1	33018	33018		0.26902	0	1		+		41228	8557	20132	20215	47543	47543					0.12766899127996112
VVPVKIPRE	9	Unmodified	_VVPVKIPRE_					0	0	0			REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2224609255791	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.428	1	79.428	78.928	79.928	0								0	0	0	0.42693	1	33072	33072		0.26902	0	1		+		41229	8557	20132	20215	47544	47544					0.12766899127996112
VVPVKIPRE	9	Unmodified	_VVPVKIPRE_					0	0	0			REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	REV__SLC7A9|p.V425Ffs*21|1|0.07|ENSG00000021488|chr19:32833275-32833275|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	346.2229186892509	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.021	1	79.33	78.83	79.83	0.30933								0	0	0	0.42693	1	33041	33041		0.26902	0	1		+		41230	8557	20132	20215	47545	47545					0.12766899127996112
VVPVLAPG	8	Unmodified	_VVPVLAPG_					0	0	0		nc|ENSG00000213088|Q16570-2|ACKR1;ENSG00000213088|ENST00000368122|ACKR1;ACKR1|p.T123Pfs*3|1|0.25|ENSG00000213088|chr1:159205804-159205817|GCACTCGCAGCTCT/-|frameshift_variant	nc|ENSG00000213088|Q16570-2|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2388488650322	2	376.239264	750.463976	-0.58455	-0.00021993	2.3654	0.00088995	1.7808	0.00067001	376.24002087345536	35.718	0.26515	36.993	36.903	37.169	1.2746					25	18	2	0	0	0	0.89198	1	15008	15008		0	0	1	2743800			41231	5213	20133	20216	47546	47546					0.07876220191008088
VVPVLAPG	8	Unmodified	_VVPVLAPG_					0	0	0		nc|ENSG00000213088|Q16570-2|ACKR1;ENSG00000213088|ENST00000368122|ACKR1;ACKR1|p.T123Pfs*3|1|0.25|ENSG00000213088|chr1:159205804-159205817|GCACTCGCAGCTCT/-|frameshift_variant	nc|ENSG00000213088|Q16570-2|ACKR1	nc|ENSG00000213088|Q16570-2|ACKR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2411376833916	2	376.239264	750.463976	1.4586	0.00054878	3.0092	0.0011322	4.4678	0.001681	376.2403846906749	39.71	0.58486	41.02	40.715	41.3	1.3102					39	19	3	0	0	0	0.89198	1	16653	16653		0	0	1	3495900			41232	5213	20133	20216	47547	47547					0.07876220191008088
VVPVLLLLI	9	Unmodified	_VVPVLLLLI_					0	0	0			REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	489.8545410037041	2	489.851722	977.68889	3.3232	0.0016279	3.0534	0.0014957	6.3766	0.0031236	489.8530022998011	101.41	0.095459	101.6	101.56	101.65	0.19076					4	2	2	0	0	0	0.85403	1	42653	42653		0	0	1	1360500	+		41233	12977	20134	20217	47548	47548					0.1991532994135241
VVPVLLLLIS	10	Unmodified	_VVPVLLLLIS_					0	0	0			REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	REV__ENST00000421092.1_1_20:58517212-58517281:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0693237185478	3	355.914249	1064.72092	-1.8464	-0.00065715	3.2315	0.0011502	1.3852	0.000493	356.2498681999769	22.65	0.087269	22.65	22.607	22.694	0					4	2	2	0	0	0	0.12561	1	9445	9445		0	0	1	282680	+		41234	12977	20135	20218	47549	47549					0.19114697624490873
VVQHLKRVLA	10	Unmodified	_VVQHLKRVLA_					0	0	0		tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	tr|A0A553SSX6|A0A553SSX6_NIACIRestrictionendonucleaseOS=NialliacirculansOX=1397GN=CEQ21_03720PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.2537719607353	3	388.252147	1161.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.639	1	28.386	27.886	28.886	1.747								0	0	0	0.66222	1	11146	11146		0.69767	0.42865	1				41235	16630	20136	20219	47550	47550					0.16021368176279793
VVQKKLLRK	9	Unmodified	_VVQKKLLRK_					0	0	0			REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2615234255791	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.4	1	108.56	108.06	109.06	0.15781								0	0	0	0.42693	1	46861	46861		0.23584	0	1		+		41236	11167	20137	20220	47551	47551					0.20914842698698521
VVQKKLLRK	9	Unmodified	_VVQKKLLRK_					0	0	0			REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	REV__UBE2O|p.E1121Rfs*4|1|0.12|ENSG00000175931|chr17:76391461-76391462|-/G|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	371.2639343142509	3	371.260642	1110.7601	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.84	1	110	109.5	110.5	0.16133								0	0	0	0.42693	1	47718	47718		0.23584	0	1		+		41237	11167	20137	20220	47552	47552					0.20914842698698521
VVQKKVIA	8	Unmodified	_VVQKKVIA_					0	0	0			REV__nc|ENSG00000079805|P50570-2|DNM2	REV__nc|ENSG00000079805|P50570-2|DNM2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	442.8007995486259	2	442.80002	883.585488	3.3686	0.0014916	-1.0625	-0.00047046	2.3062	0.0010212	442.7995194043858	106.14	0.21599	106.3	106.2	106.42	0.16174					37	11	5	0	0	0	0.89178	1	45374	45374		0.69038	0	1	605380000	+		41238	14396	20138	20221	47553	47553					0.13903842553497725
VVQLLPGV	8	Unmodified	_VVQLLPGV_					0	0	0		ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	ENSG00000175336|ENST00000398189|APOF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	412.7673522830009	2	412.765646	823.516739	0.39292	0.00016218	2.4013	0.00099118	2.7942	0.0011534	412.76710874256315	20.97	0.27271	22.545	22.409	22.681	1.5748					15	8	2	0	0	0	0.89178	1	8746	8746		0.69038	0	1	791890			41239	4371	20139	20222	47554	47554					0.09792178253815109
VVQLLQVL	8	Unmodified	_VVQLLQVL_					0	0	0		ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	ENSG00000180182|ENST00000324817|MED14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	456.3005554080009	2	456.299853	910.585153	3.3618	0.001534	-0.54002	-0.00024641	2.8218	0.0012876	456.2995296323462	106.13	0.50067	106.29	106.19	106.7	0.15781					59	25	5	0	0	0	0.89178	1	45344	45344		0.69038	0	1	1053299999.9999999			41240	4540	20140	20223	47555	47555					0.1262842283365444
VVQLLVLIL	9	Unmodified	_VVQLLVLIL_					0	0	0			REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	505.3535644412041	2	505.354628	1008.6947	3.1291	0.0015813	-4.2025	-0.0021237	-1.0733	-0.00054242	505.3523030796444	105.53	0.17461	105.58	105.53	105.71	0.056801					15	8	2	0	0	0	0.85019	1	44820	44820		0.52476	0	1	16792000	+		41241	13189	20141	20224	47556	47556					0.19070428452994292
VVQLLVLIL	9	Unmodified	_VVQLLVLIL_					0	0	0			REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	505.354628	1008.6947	3.1291	0.0015813	-4.2025	-0.0021237	-1.0733	-0.00054242	505.3523030796444	105.53	0.17461	105.58	105.53	105.71	0.056801	-0.048693	0.00021479	NaN	0.52476	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	16792000	+		41242	13189	20141	20224							0.19070428452994292
VVQLLVLIL	9	Unmodified	_VVQLLVLIL_					0	0	0			REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	REV__ENST00000460734.5_1_21:46536910-46540732:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	505.354628	1008.6947	3.1781	0.0016061	-4.7007	-0.0023755	-1.5226	-0.00076946	505.35162037020075	105.51	0.16144	105.68	105.59	105.75	0.16679	0.048693	-0.0002888	NaN	0.52476	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6235500	+		41243	13189	20141	20224							0.19070428452994292
VVQPRLPRRQR	11	Unmodified	_VVQPRLPRRQR_					0	0	0			REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.2955505251884	3	468.960138	1403.85858	3.2747	0.0015357	-1.7669	-0.00082863	1.5078	0.00070708	468.95903891602467	85.272	0.43631	85.524	85.196	85.632	0.25227					20	13	2	0	0	0	1.0402	1	35601	35601		0.08335	0	1	2177000	+		41244	9039	20142	20225	47557	47557					0.17280838996430248
VVQPRLPRRQR	11	Unmodified	_VVQPRLPRRQR_					0	0	0			REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	REV__nc|ENSG00000101474|Q9HDC9-2|APMAP	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	469.2955505251884	3	468.960138	1403.85858	3.2747	0.0015357	-1.7669	-0.00082863	1.5078	0.00070708	468.95903891602467	85.272	0.43631	85.524	85.196	85.632	0.25227					20	13	2	0	0	0	0.14606	1	35601	35601		0.08335	0	1	2177000	+		41245	9039	20142	20225	47558	47558					0.17280838996430248
VVQREKQQLKA	11	Unmodified	_VVQREKQQLKA_					0	0	0		sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1;sp|Q6SW99|PP150_HCMVMTegumentproteinpp150OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL32PE=3SV=1	sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1	sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8988525271416	2	663.896243	1325.77793	2.2498	0.0014936	-1.8431	-0.0012236	0.40675	0.00027004	663.8951592135703	81.369	1.3111	81.369	80.604	81.915	0					108	42	3	0	0	0	1.0366	1	33607	33607		1.1933	0.12188	1	2804200			41246	15989	20143	20226	47559	47559					0.12807513162874784
VVQREKQQLKA	11	Unmodified	_VVQREKQQLKA_					0	0	0		sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1;sp|Q6SW99|PP150_HCMVMTegumentproteinpp150OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL32PE=3SV=1	sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1	sp|P08318|PP150_HCMVALargestructuralphosphoproteinOS=Humancytomegalovirus(strainAD169)OX=10360GN=UL32PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	663.8986694216728	2	663.896243	1325.77793	2.556	0.0016969	-0.99584	-0.00066114	1.5602	0.0010358	663.8953428880357	83.489	2.5175	83.489	82.646	85.164	0					205	80	4	0	0	0	1.0366	1	35195	35195		1.1933	0	1	6935600			41247	15989	20143	20226	47560	47560					0.12807513162874784
VVQRVVALPLV	11	Unmodified	_VVQRVVALPLV_					0	0	0		ENST00000586020.1_1_19:4529720-4540017:-|nuORF;ENSG00000214456|ENST00000381848|PLIN5	ENST00000586020.1_1_19:4529720-4540017:-|nuORF	ENST00000586020.1_1_19:4529720-4540017:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.8931762576103	2	596.892441	1191.77033	2.6438	0.0015781	-0.52725	-0.00031471	2.1166	0.0012634	596.8918081192251	107.46	0.1843	107.51	107.39	107.58	0.052452					20	8	3	0	0	0	1.0395	1	45947	45947		0.30703	0	1	71305000			41248	5241	20144	20227	47561	47561					0.1821140563326935
VVQVPAIIRE	10	Unmodified	_VVQVPAIIRE_					0	0	0			REV__tr|A0A553SIF1|A0A553SIF1_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_14740PE=4SV=1	REV__tr|A0A553SIF1|A0A553SIF1_NIACITranscriptionantiterminatorOS=NialliacirculansOX=1397GN=CEQ21_14740PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	562.3472167849541	2	562.345323	1122.67609	2.3852	0.0013413	-2.6967	-0.0015165	-0.31153	-0.00017519	562.3437694890226	73.779	1.3866	74.104	73.881	75.267	0.32494					94	43	3	0	0	0	0.89803	1	31130	31130		1.6526	0.17072	1	2032100	+		41249	14847	20145	20228	47562	47562					0.11966266811123205
VVQVTVHEP	9	Unmodified	_VVQVTVHEP_					0	0	0			REV__PARVB|p.D251Ifs*6|1|0.16|ENSG00000188677|chr22:44147898-44147898|G/-|frameshift_variant	REV__PARVB|p.D251Ifs*6|1|0.16|ENSG00000188677|chr22:44147898-44147898|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	504.2816650271416	2	504.279649	1006.54475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.74	1	103.74	103.24	104.24	0								0	0	0	0.42693	1	43619	43619		4.3292	0	1		+		41250	11579	20146	20229	47563	47563					0.04173456443231771
VVRAKKLW	8	Unmodified	_VVRAKKLW_					0	0	0			REV__nc|ENSG00000154767|Q01831-2|XPC	REV__nc|ENSG00000154767|Q01831-2|XPC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	501.8312255740166	2	500.326737	998.63892	3.0203	0.0015111	-2.5492	-0.0012754	0.47116	0.00023574	500.32547908387596	107.57	0.28015	107.73	107.58	107.86	0.15796					58	14	6	0	0	0	0.89178	1	46279	46279		0.69038	0	1	3293399999.9999995	+		41251	10479	20147	20230	47564	47564					0.13954640056022072
VVRARDPA	8	Unmodified	_VVRARDPA_					0	0	0			REV__ENST00000460587.1_1_9:135979935-135983404:-|nuORF	REV__ENST00000460587.1_1_9:135979935-135983404:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.2613098025322	2	442.259051	882.503549	2.2422	0.00099165	0.13729	6.072E-05	2.3795	0.0010524	442.25927232893184	85.774	0.21815	85.774	85.633	85.852	0					9	6	2	0	0	0	0.8909	1	35746	35746		2.0598	0.40713	1	525400	+		41252	10595	20148	20231	47565	47565					0.057597401944121884
VVRARDPA	8	Unmodified	_VVRARDPA_					0	0	0			REV__ENST00000460587.1_1_9:135979935-135983404:-|nuORF	REV__ENST00000460587.1_1_9:135979935-135983404:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	442.259051	882.503549	2.2422	0.00099165	0.13729	6.072E-05	2.3795	0.0010524	442.25927232893184	85.774	0.21815	85.774	85.633	85.852	0	0	0	NaN	2.0598	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	525400	+		41253	10595	20148	20231							0.057597401944121884
VVRGKIRL	8	Unmodified	_VVRGKIRL_					0	0	0		ENSG00000164484|ENST00000296978|TMEM200A	ENSG00000164484|ENST00000296978|TMEM200A	ENSG00000164484|ENST00000296978|TMEM200A	MSMS	GG20161007_CRH_Patient100_A02_01	1	314.2174560427666	3	314.218666	939.634169	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.381	1	24.381	23.881	24.881	0								0	0	0	1.0178	1	10168	10168		0.45834	0	1				41254	3780	20149	20232	47566	47566					0.16193755913252517
VVRGRGQV	8	Unmodified	_VVRGRGQV_					0	0	0		ENST00000568164.1_1_16:75148885-75149486:-|nuORF	ENST00000568164.1_1_16:75148885-75149486:-|nuORF	ENST00000568164.1_1_16:75148885-75149486:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	435.7678405642509	2	435.767043	869.519533	1.0663	0.00046466	0.45089	0.00019648	1.5172	0.00066114	435.76692529630117	70.367	1.2651	70.367	69.675	70.94	0					89	40	3	0	0	0	0.89178	2	29194	29194;29401		0.69038	0	1	4790100			41255	7370	20150	20233	47567;47568	47567					0.07955446431333257
VVRGRGQV	8	Unmodified	_VVRGRGQV_					0	0	0		ENST00000568164.1_1_16:75148885-75149486:-|nuORF	ENST00000568164.1_1_16:75148885-75149486:-|nuORF	ENST00000568164.1_1_16:75148885-75149486:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.7668029665947	2	435.767043	869.519533	1.6863	0.00073481	0.50806	0.0002214	2.1943	0.00095621	435.76690415837396	69.979	1.2957	70.301	69.752	71.048	0.32223					93	41	3	0	0	0	0.89178	1	29426	29426		0.69038	0	1	5043000			41256	7370	20150	20233	47569	47569					0.07955446431333257
VVRHRRASV	9	Unmodified	_VVRHRRASV_					0	0	0		ENST00000486527.6_1_2:25016788-25037388:+|nuORF;ENST00000498362.1_1_2:25016366-25039516:+|nuORF;ENST00000491031.5_1_2:25016788-25038721:+|nuORF;nc|ENSG00000138092|Q9BU64-2|CENPO;ENSG00000138092|ENST00000380834|CENPO	ENST00000486527.6_1_2:25016788-25037388:+|nuORF	ENST00000486527.6_1_2:25016788-25037388:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3317138552666	2	540.330873	1078.64719	1.4285	0.00077184	-0.82382	-0.00044513	0.60465	0.00032671	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.8432	1	28909	28909		1.4819	0.8804	1	3238400			41257	2814	20151	20234	47570	47570					0.11101587025336812
VVRIKRTTA	9	Unmodified	_VVRIKRTTA_					0	0	0			REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1043.673266589642	1	1043.66839	1042.66111	2.8884	0.0030145	1.6996	0.0017738	4.588	0.0047883	1043.6705539261275	107.57	0.16602	107.72	107.62	107.79	0.15781					23	8	4	0	0	0	0.85019	1	46297	46297		0.52476	0	1	33882000	+		41258	12834	20152	20235	47571	47571					0.14148819733804885
VVRIKRTTA	9	Unmodified	_VVRIKRTTA_					0	0	0			REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1043.66839	1042.66111	1.268	0.0013234	-0.38098	-0.00039762	0.88706	0.0009258	1043.6674726365238	107.61	0.10114	107.61	107.57	107.67	0	-0.055762	-0.0013416	NaN	0.52476	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5585800	+		41259	12834	20152	20235							0.14148819733804885
VVRIKRTTA	9	Unmodified	_VVRIKRTTA_					0	0	0			REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1043.66839	1042.66111	3.2594	0.0034017	1.2086	0.0012614	4.468	0.0046631	1043.6695360028086	107.58	0.11533	107.63	107.58	107.69	0.052452	-0.039355	0.0003174	NaN	0.52476	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11433000	+		41260	12834	20152	20235							0.14148819733804885
VVRIKRTTA	9	Unmodified	_VVRIKRTTA_					0	0	0			REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	REV__ENST00000395067.6_1_9:103213293-103213446:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1043.66839	1042.66111	2.8884	0.0030145	1.6996	0.0017738	4.588	0.0047883	1043.6705539261275	107.57	0.16602	107.72	107.62	107.79	0.15781	0.054441	0.00082979	NaN	0.52476	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	33882000	+		41261	12834	20152	20235							0.14148819733804885
VVRKKPLL	8	Unmodified	_VVRKKPLL_					0	0	0			REV__CCKBR|p.A327P|1|0.21|ENSG00000110148|chr11:6271178-6271178|G/C|missense_variant	REV__CCKBR|p.A327P|1|0.21|ENSG00000110148|chr11:6271178-6271178|G/C|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	318.2271911501884	3	318.22705	951.659321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.95	1	104.13	103.63	104.63	0.1731								0	0	0	1.0178	1	43894	43894		0	0	1		+		41262	8185	20153	20236	47572	47572					0.1815581071583665
VVRLDVKEFD	10	Unmodified	_VVRLDVKEFD_					0	0	0			REV__tr|A0A7D7A324|A0A7D7A324_9CLOTMethionine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=metGPE=3SV=1	REV__tr|A0A7D7A324|A0A7D7A324_9CLOTMethionine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=metGPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	610.3433105349541	2	610.337695	1218.66084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.23	1	103.42	102.92	103.92	0.18066								0	0	0	0.6607	1	43448	43448		3.2813	0	1		+		41263	15858	20154	20237	47573	47573					0.06025355223277984
VVRLLRLRA	9	Unmodified	_VVRLLRLRA_					0	0	0		ENSG00000184428|ENST00000329245|TOP1MT	ENSG00000184428|ENST00000329245|TOP1MT	ENSG00000184428|ENST00000329245|TOP1MT	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	365.9186889529228	3	365.92062	1094.74003	-1.5749	-0.00057627	-3.0047	-0.0010995	-4.5795	-0.0016757	365.91940766494247	22.416	0.17868	22.416	22.369	22.548	0					13	5	3	0	0	0	0.847	1	9330	9330		0.96228	0	1	4257900			41264	4693	20155	20238	47574	47574					0.19645091758729905
VVRLNAGRIVI	11	Unmodified	_VVRLNAGRIVI_					0	0	0			REV__ENST00000521015.5_1_8:28047564-28047732:+|nuORF	REV__ENST00000521015.5_1_8:28047564-28047732:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1992370486259	4	303.200208	1208.77173	-2.6672	-0.00080869	-0.37655	-0.00011417	-3.0437	-0.00092286	303.20008450280005	31.651	1.3899	31.651	30.928	32.318	0					148	44	4	0	0	0	1.0365	1	13162	13162		1.2148	0.51716	1	5737000	+		41265	13630	20156	20239	47575	47575					0.17569039722025082
VVRLPLAH	8	Unmodified	_VVRLPLAH_					0	0	0		ENSG00000189046|ENST00000429722|ALKBH2	ENSG00000189046|ENST00000429722|ALKBH2	ENSG00000189046|ENST00000429722|ALKBH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1962158083916	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.13	1	110.29	109.79	110.79	0.15228								0	0	0	1.0178	1	47773	47773		0	0	1				41266	4891	20157	20240	47576	47576					0.10978091613549168
VVRLPLAH	8	Unmodified	_VVRLPLAH_					0	0	0		ENSG00000189046|ENST00000429722|ALKBH2	ENSG00000189046|ENST00000429722|ALKBH2	ENSG00000189046|ENST00000429722|ALKBH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	302.1966430544853	3	302.19575	903.565421	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.13	1	113.28	112.78	113.78	0.14912								0	0	0	1.0178	1	48989	48989		0	0	1				41267	4891	20157	20240	47577	47577					0.10978091613549168
VVRPATLI	8	Unmodified	_VVRPATLI_					0	0	0			REV__ENST00000567712.1_1_16:50059524-50059614:+|nuORF	REV__ENST00000567712.1_1_16:50059524-50059614:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	868.5648071169853	1	868.561464	867.554188	1.1831	0.0010276	2.4831	0.0021568	3.6662	0.0031843	868.5638011029154	109.38	0.26063	109.38	109.22	109.48	0					27	11	3	0	0	0	0.89178	1	47340	47340		0.69038	0	1	29510000	+		41268	13944	20158	20241	47578	47578					0.11511269519428424
VVRSLVLV	8	Unmodified	_VVRSLVLV_					0	0	0			REV__ENSG00000165164|ENST00000378653|CFAP47	REV__ENSG00000165164|ENST00000378653|CFAP47	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	884.5952026247978	1	884.592764	883.585488	2.8048	0.0024811	-1.2178	-0.0010772	1.5871	0.0014039	884.5915151842929	107.76	0.27049	107.81	107.68	107.95	0.052452					51	14	5	0	0	0	0.89176	1	46142	46142		0.79363	0	1	1661199999.9999998	+		41269	10768	20159	20242	47579	47579					0.13903842553497725
VVRTKFKLLH	10	Unmodified	_VVRTKFKLLH_					0	0	0			REV__nc|ENSG00000064270|O75185-2|ATP2C2	REV__nc|ENSG00000064270|O75185-2|ATP2C2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	311.1346313357353	4	310.952667	1239.78156	-2.1571	-0.00067076	0.55941	0.00017395	-1.5977	-0.00049681	311.2026738625164	56.958	0.17407	56.958	56.866	57.041	0					6	5	2	0	0	0	0.12561	1	23760	23760		0.15932	0	1	180790	+		41270	14388	20160	20243	47580	47580					0.1712622772740815
VVRVRKNKVKR	11	Unmodified	_VVRVRKNKVKR_					0	0	0			REV__ENSG00000214097|ENST00000397537|SMCO1	REV__ENSG00000214097|ENST00000397537|SMCO1	MSMS	GG20161007_CRH_Patient100_W632_02	4	691.4713012576103	2	691.464961	1380.91537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.19	1	108.35	107.85	108.85	0.15795								0	0	0	0.63775	1	46651	46651		0	0	1		+		41271	11850	20161	20244	47581	47581					0.24014886552936332
VVRVVRLY	8	Unmodified	_VVRVVRLY_					0	0	0			REV__ENST00000509411.5_1_5:147774339-147778706:+|nuORF	REV__ENST00000509411.5_1_5:147774339-147778706:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	335.2208434939384	3	335.218555	1002.63383	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.29	1	104.45	103.95	104.95	0.16055								0	0	0	1.0178	1	44142	44142		0.45834	0	1		+		41272	10288	20162	20245	47582	47582					0.13262336193417923
VVSGTPVG	8	Unmodified	_VVSGTPVG_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	358.2034484744072	2	358.202879	714.391205	0.63507	0.00022748	3.0732	0.0011008	3.7083	0.0013283	358.2039019697105	26.113	0.53733	26.375	26.144	26.681	0.26173					27	17	2	0	0	0	0.89176	1	10914	10914		0.79363	0	1	849660			41273	4746	20163	20246	47583	47583					0.022584663975862895
VVSGTPVG	8	Unmodified	_VVSGTPVG_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	358.202879	714.391205	0.12529	4.4879E-05	3.9639	0.0014199	4.0892	0.0014648	358.2043432055932	24.984	0.51186	26.243	26.046	26.558	1.2594	-0.084857	0.00010619	NaN	0.79363	27	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1113700			41274	4746	20163	20246							0.022584663975862895
VVSGTPVG	8	Unmodified	_VVSGTPVG_					0	0	0		ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	ENSG00000185453|ENST00000614654|ZSWIM9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	358.202879	714.391205	0.20359	7.2926E-05	4.3119	0.0015445	4.5155	0.0016175	358.20456164605736	24.682	0.47154	26.366	26.163	26.634	1.6845	0.038334	0.0003555	NaN	0.79363	24	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	720480			41275	4746	20163	20246							0.022584663975862895
VVSGVISSTI	10	Unmodified	_VVSGVISSTI_					0	0	0		nc|ENSG00000102078|O95258-2|SLC25A14;ENSG00000102078|ENST00000545805|SLC25A14;nc|ENSG00000102078|O95258-3|SLC25A14;ENST00000471795.1_1_X:129483237-129498727:+|nuORF	nc|ENSG00000102078|O95258-2|SLC25A14	nc|ENSG00000102078|O95258-2|SLC25A14	MSMS	GG20161007_CRH_Patient100_W632_01	3	481.2852661013603	2	481.281857	960.549162	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.155	1	90.175	89.675	90.675	1.0199								0	0	0	0.66052	1	37576	37576		3.5965	0	1				41276	1379	20164	20247	47584	47584					0.06730920866152701
VVSHLGNR	8	Unmodified	_VVSHLGNR_					0	0	0			REV__nc|ENSG00000177706|Q8IXL6-2|FAM20C	REV__nc|ENSG00000177706|Q8IXL6-2|FAM20C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	441.1847106814384	2	441.251226	880.487899	0.21904	9.665E-05	0.31052	0.00013702	0.52955	0.00023367	441.25111354060175	12.378	0.11691	13.165	13.095	13.212	0.78751					5	3	2	0	0	0	2.3239	1	5113	5113		5.7604	0	1	158730	+		41277	11223	20165	20248	47585	47585					0.04287453677375197
VVSKKKAF	8	Unmodified	_VVSKKKAF_					0	0	0			REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	453.7929870486259	2	453.792195	905.569838	3.4507	0.0015659	-3.3862	-0.0015366	0.064475	2.9258E-05	453.7908607520625	107.73	0.16727	107.89	107.79	107.96	0.15795					18	8	3	0	0	0	0.89176	1	46352	46352		0.79363	0	1	65603000	+		41278	14979	20166	20249	47586	47586					0.11327556036462738
VVSKKKAF	8	Unmodified	_VVSKKKAF_					0	0	0			REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	453.792195	905.569838	3.3283	0.0015103	-3.9491	-0.0017921	-0.62081	-0.00028172	453.7906068941928	107.76	0.17848	107.81	107.73	107.91	0.052452	-0.033774	-0.00076129	NaN	0.79363	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	82928000	+		41279	14979	20166	20249							0.11327556036462738
VVSKKKAF	8	Unmodified	_VVSKKKAF_					0	0	0			REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	453.792195	905.569838	3.3619	0.0015256	-3.5488	-0.0016104	-0.18691	-8.4817E-05	453.7909976221047	107.73	0.1084	107.89	107.83	107.93	0.15781	0.039971	-0.00039802	NaN	0.79363	13	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	70808000	+		41280	14979	20166	20249							0.11327556036462738
VVSKKKAF	8	Unmodified	_VVSKKKAF_					0	0	0			REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	REV__tr|A0A553SL90|A0A553SL90_NIACI3'-5'exonucleaseDinGOS=NialliacirculansOX=1397GN=dinGPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	453.792195	905.569838	3.4507	0.0015659	-3.3862	-0.0015366	0.064475	2.9258E-05	453.7908607520625	107.73	0.16727	107.89	107.79	107.96	0.15795	0.04372	-0.00025045	NaN	0.79363	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	65603000	+		41281	14979	20166	20249							0.11327556036462738
VVSLESQK	8	Unmodified	_VVSLESQK_					0	0	0		ENSG00000151304|ENST00000339397|SRFBP1	ENSG00000151304|ENST00000339397|SRFBP1	ENSG00000151304|ENST00000339397|SRFBP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	445.1203796267509	2	445.2531	888.491647	-0.081127	-3.6122E-05	1.0233	0.00045563	0.94218	0.00041951	445.2535718925269	11.708	0.1578	12.401	12.29	12.448	0.69396					7	4	2	0	0	0	2.3239	1	4853	4853		9.3474	0	1	354960			41282	3282	20167	20250	47587	47587					0.04294078660575451
VVSLLPVLIV	10	Unmodified	_VVSLLPVLIV_					0	0	0		tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	tr|A0A553SF51|A0A553SF51_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2423583865166	3	351.242366	1050.70527	-0.17861	-6.2736E-05	1.9615	0.00068895	1.7829	0.00062622	351.2434098450176	16.233	0.9273	17.272	17.013	17.94	1.0392					119	32	6	0	0	0	0.89803	1	6897	6897		0.77653	0.61721	1	381400000			41283	16041	20168	20251	47588	47588					0.1819441110740172
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	351.2011291384697	3	351.242366	1050.70527	-1.8853	-0.0006622	3.9939	0.0014028	2.1086	0.00074063	351.2436945980504	24.657	0.27524	24.657	24.521	24.797	0					13	8	2	0	0	0	0.12561	1	10229	10229		0	0	1	380490			41284	16509	20169	20252	47589	47589					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2442199587822	3	351.242366	1050.70527	0.20361	7.1516E-05	2.9019	0.0010193	3.1056	0.0010908	351.2437163212668	19.445	1.8842	19.639	19.139	21.024	0.19342					228	60	6	0	0	0	0.89803	4	8169	8169;8208;8335;8484		0.15932	0	1	155460000			41285	16509	20169	20252	47590;47591;47592;47593	47590					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2424499392509	3	351.242366	1050.70527	0.33569	0.00011791	2.3995	0.00084281	2.7352	0.00096072	351.24325833524324	21.886	1.4635	22.109	21.872	23.336	0.223					130	48	6	0	0	0	0.89803	1	9271	9271		0.15932	0	1	59592000			41286	16509	20169	20252	47594	47594					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2429382205009	3	351.242366	1050.70527	0.41649	0.00014629	2.4862	0.00087327	2.9027	0.0010196	351.243198218401	23.418	0.68784	23.651	23.346	24.033	0.23306					40	21	2	0	0	0	0.89803	1	9670	9670		0	0	1	455340			41287	16509	20169	20252	47595	47595					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2426635622978	3	351.242366	1050.70527	0.49394	0.00017349	1.7762	0.00062388	2.2701	0.00079737	351.2427257691628	24.92	0.89156	25.172	24.813	25.705	0.25197					37	28	2	0	0	0	0.89803	1	10370	10370		0	0	1	483960			41288	16509	20169	20252	47596	47596					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2437316775322	3	351.242366	1050.70527	0.54083	0.00018996	2.138	0.00075095	2.6788	0.00094092	351.2426888797595	25.916	0.63988	26.168	25.675	26.314	0.25197					32	20	2	0	0	0	0.89803	1	10760	10760		0	0	1	307580			41289	16509	20169	20252	47597	47597					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2437316775322	3	351.242366	1050.70527	-0.61226	-0.00021505	3.2734	0.0011498	2.6612	0.00093472	351.2437592767355	18.697	1.6375	19.677	19.172	20.809	0.97922					203	54	6	0	0	0	0.89803	2	7890	7890;8090		0	0	1	143590000			41290	16509	20169	20252	47598;47599	47598					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2430908083916	3	351.242366	1050.70527	-0.31456	-0.00011049	2.7544	0.00096747	2.4399	0.00085699	351.24338489352726	20.872	1.9953	21.997	21.775	23.77	1.1254					139	65	5	0	0	0	0.89803	3	8745	8745;8907;8960		0.15932	0	1	92439000			41291	16509	20169	20252	47600;47601;47602	47600					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	351.2434570193291	3	351.242366	1050.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.152	1	18.05	17.55	18.55	0.89794								0	0	0	0.66254	1	7139	7139		0.15932	0	1				41292	16509	20169	20252	47603	47603					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2442504763603	3	351.242366	1050.70527	-0.17861	-6.2736E-05	1.9615	0.00068895	1.7829	0.00062622	351.2434098450176	16.233	0.9273	17.272	17.013	17.94	1.0392					119	32	6	0	0	0	0.89803	1	6661	6661		0.15932	0	1	381400000			41293	16509	20169	20252	47604	47604					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2433044314384	3	351.242366	1050.70527	-0.10271	-3.6078E-05	2.81	0.00098699	2.7073	0.00095092	351.24375046540564	18.028	1.6308	19.476	19.046	20.677	1.448					199	53	6	0	0	0	0.89803	2	7609	7609;7854		0.15932	0	1	364430000			41294	16509	20169	20252	47605;47606	47605					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	351.2431518435478	3	351.242366	1050.70527	-0.0090448	-3.1769E-06	2.3168	0.00081374	2.3077	0.00081057	351.2432799196589	20.291	1.6712	21.866	21.639	23.31	1.5748					150	55	6	0	0	0	0.89803	7	8427	8427;8609;8661;8718;8765;8819;8869		0.15932	0	1	95744000			41295	16509	20169	20252	47607;47608;47609;47610;47611;47612;47613	47607					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	350.5573303103447	3	351.242366	1050.70527	-0.14765	-5.186E-05	2.7716	0.0009735	2.6239	0.00092164	351.24329138237425	17.008	0.39231	18.31	18.08	18.472	1.3023					15	12	2	0	0	0	0.12561	1	7010	7010		0	0	1	648460			41296	16509	20169	20252	47614	47614					0.18194411107424457
VVSLLPVVLI	10	Unmodified	_VVSLLPVVLI_					0	0	0		tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	tr|A0A553SQA9|A0A553SQA9_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_22530PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	351.242366	1050.70527	-1.8044	-0.00063379	4.6265	0.001625	2.8221	0.00099124	351.2437176655909	26.336	0.65597	26.336	26.148	26.804	0	0.083848	0.00080108	NaN	0	31	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	365630			41297	16509	20169	20252							0.18194411107424457
VVSLRALL	8	Unmodified	_VVSLRALL_					0	0	0		ENST00000413209.6_1_22:30093941-30094187:+|nuORF	ENST00000413209.6_1_22:30093941-30094187:+|nuORF	ENST00000413209.6_1_22:30093941-30094187:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	870.5793945193291	1	870.577114	869.569838	3.0481	0.0026536	0.27085	0.0002358	3.319	0.0028894	870.5773227733886	107.02	0.15839	107.18	107.1	107.26	0.15781					15	6	3	0	0	0	0.89176	1	45948	45948		0.79363	0	1	25534000			41298	6391	20170	20253	47615	47615					0.12983556036476784
VVSLRALL	8	Unmodified	_VVSLRALL_					0	0	0		ENST00000413209.6_1_22:30093941-30094187:+|nuORF	ENST00000413209.6_1_22:30093941-30094187:+|nuORF	ENST00000413209.6_1_22:30093941-30094187:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	870.577114	869.569838	3.1375	0.0027314	-1.0571	-0.00092028	2.0804	0.0018111	870.5762135699317	107.02	0.16764	107.18	107.08	107.25	0.16174	0.00051401	-0.00077084	NaN	0.79363	16	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	25622000			41299	6391	20170	20253							0.12983556036476784
VVSSIEQK	8	Unmodified	_VVSSIEQK_					0	0	0		ENST00000392459.3_1_6:127676988-127677414:+|nuORF;ENST00000440317.1_1_2:127315208-127315727:-|nuORF;ENST00000480304.5_1_8:101936173-101961117:-|nuORF;ENSG00000164924|ENST00000395958|YWHAZ;ENST00000517727.5_1_8:101936341-101962760:-|nuORF	ENST00000392459.3_1_6:127676988-127677414:+|nuORF	ENST00000392459.3_1_6:127676988-127677414:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1203185915947	2	445.2531	888.491647	0.21135	9.4105E-05	2.225	0.00099069	2.4364	0.0010848	445.25420042566293	11.605	0.15932	12.366	12.256	12.416	0.76165					6	4	2	0	0	0	2.3239	1	4810	4810		24.674	10.092	1	591500			41300	3802	20171	20254	47616	47616					0.042940786605640824
VVSVATPT	8	Unmodified	_VVSVATPT_					0	0	0		nc|ENSG00000081189|Q06413-4|MEF2C;nc|ENSG00000081189|Q06413-3|MEF2C;nc|ENSG00000081189|Q06413-6|MEF2C;nc|ENSG00000081189|Q06413-2|MEF2C;ENSG00000081189|ENST00000504921|MEF2C;nc|ENSG00000081189|Q06413-5|MEF2C	nc|ENSG00000081189|Q06413-4|MEF2C	nc|ENSG00000081189|Q06413-4|MEF2C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	773.5604125857353	1	773.440346	772.433069	2.8011	0.0021665	-0.39379	-0.00030457	2.4073	0.0018619	773.4401245812516	107.89	0.085258	108.05	107.99	108.08	0.15796					6	4	2	0	0	0	2.3239	1	46469	46469		0	0	1	26697000			41301	1017	20172	20255	47617	47617					0.037750220860743866
VVSVVTKQ	8	Unmodified	_VVSVVTKQ_					0	0	0			REV__ENST00000456936.3_1_5:114951256-114951313:-|nuORF	REV__ENST00000456936.3_1_5:114951256-114951313:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	430.2651550173759	2	430.26601	858.517468	2.6852	0.0011554	-2.7993	-0.0012044	-0.11407	-4.908E-05	430.26464888745676	69.859	0.59409	71.213	70.835	71.429	1.3536					41	18	3	0	0	0	0.89008	2	29307	29307;29357		2.5775	0	1	2890900	+		41302	13167	20173	20256	47618;47619	47618					0.08254972902841473
VVTATQRR	8	Unmodified	_VVTATQRR_					0	0	0		ENST00000435805.6_1_10:43047711-43048011:-|nuORF	ENST00000435805.6_1_10:43047711-43048011:-|nuORF	ENST00000435805.6_1_10:43047711-43048011:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	465.7779113650322	2	465.777608	929.540663	2.6459	0.0012324	-0.74775	-0.00034828	1.8982	0.00088414	465.7771176758713	77.581	0.56447	77.897	77.574	78.138	0.31653					50	17	4	0	0	0	0.89051	1	32408	32408		2.3027	0	1	17927000			41303	6526	20174	20257	47620	47620					0.07307411740168845
VVTKTNSV	8	Unmodified	_VVTKTNSV_					0	0	0			REV__nc|ENSG00000175497|Q8N608-4|DPP10	REV__nc|ENSG00000175497|Q8N608-4|DPP10	MSMS	GG20161007_CRH_Patient100_A02_01	1	424.2479431033134	2	424.247818	846.481082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.13	1	105.13	104.63	105.63	0								0	0	0	1.0178	1	44555	44555		5.7604	0.52976	1		+		41304	11154	20175	20258	47621	47621					0.051700960061339174
VVTLAHKSSFR	11	Unmodified	_VVTLAHKSSFR_					0	0	0			REV__ENSG00000128617|ENST00000249389|OPN1SW	REV__ENSG00000128617|ENST00000249389|OPN1SW	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	311.1350280642509	4	311.933203	1243.70371	1.5013	0.0004683	1.1914	0.00037163	2.6927	0.00083993	312.1844479492261	56.372	0.14156	56.693	56.589	56.731	0.32103					5	4	2	0	0	0	0.14606	1	23593	23593		0.50596	0.4226	1	391060	+		41305	9735	20176	20259	47622	47622					0.09160170071368157
VVTRAPRL	8	Unmodified	_VVTRAPRL_					0	0	0		ENST00000430262.2_1_17:47395344-47439458:-|nuORF	ENST00000430262.2_1_17:47395344-47439458:-|nuORF	ENST00000430262.2_1_17:47395344-47439458:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	456.2955505251884	2	456.292894	910.571235	3.4702	0.0015834	3.4159	0.0015586	6.8861	0.0031421	456.29427912803476	105.94	0.21926	106.11	105.95	106.17	0.16679					13	10	2	0	0	0	0.8909	1	45161	45161		2.0598	0	1	171860000			41306	6496	20177	20260	47623	47623					0.11237190125223151
VVTRIAKAIR	10	Unmodified	_VVTRIAKAIR_					0	0	0			REV__tr|A0A7D7A0M3|A0A7D7A0M3_9CLOTRNA-bindingproteinKhpAOS=ClostridiumintestinaleOX=36845GN=khpAPE=3SV=1	REV__tr|A0A7D7A0M3|A0A7D7A0M3_9CLOTRNA-bindingproteinKhpAOS=ClostridiumintestinaleOX=36845GN=khpAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	563.8740722537041	2	563.874582	1125.73461	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.17377	1	0.84115	0.34115	1.3412	0.66738								0	0	0	0.66264	1	71	71		0	0	1		+		41307	15813	20178	20261	47624	47624					0.17677368176259733
VVTSVLPR	8	Unmodified	_VVTSVLPR_					0	0	0			REV__ENSG00000214960|ENST00000407010|CRPPA	REV__ENSG00000214960|ENST00000407010|CRPPA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.7740051150322	2	435.774003	869.533452	1.4267	0.00062171	-0.6337	-0.00027615	0.79299	0.00034557	435.7734618622882	26.054	0.37398	27.313	27.08	27.454	1.2594					19	11	2	0	0	0	0.88261	1	10902	10902		7.2892	2.0586	1	941480	+		41308	11863	20179	20262	47625	47625					0.09346679139764547
VVTSVLPR	8	Unmodified	_VVTSVLPR_					0	0	0			REV__ENSG00000214960|ENST00000407010|CRPPA	REV__ENSG00000214960|ENST00000407010|CRPPA	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	435.774003	869.533452	1.4267	0.00062171	-0.6337	-0.00027615	0.79299	0.00034557	435.7734618622882	26.054	0.37398	27.313	27.08	27.454	1.2594	-0.013643	0.00042096	NaN	7.2892	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	941480	+		41309	11863	20179	20262							0.09346679139764547
VVTSVLPR	8	Unmodified	_VVTSVLPR_					0	0	0			REV__ENSG00000214960|ENST00000407010|CRPPA	REV__ENSG00000214960|ENST00000407010|CRPPA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	435.774003	869.533452	0.72113	0.00031425	-1.4275	-0.00062206	-0.70636	-0.00030781	435.7735983370015	25.624	0.43353	27.341	27.089	27.523	1.7167	0.013643	-0.00027086	NaN	7.2892	20	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	683760	+		41310	11863	20179	20262							0.09346679139764547
VVTVGVITVL	10	Unmodified	_VVTVGVITVL_					0	0	0		DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant;ENSG00000187323|ENST00000442544|DCC	DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3274413943291	2	500.326068	998.637583	3.3375	0.0016698	-0.61376	-0.00030708	2.7237	0.0013627	500.3256057203456	107.62	0.28056	107.67	107.54	107.82	0.052452					41	14	4	0	0	0	0.89803	2	46053	46053;46127		0	0	1	482670000			41311	393	20180	20263	47626;47627	47626					0.13820961176588753
VVTVGVITVL	10	Unmodified	_VVTVGVITVL_					0	0	0		DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant;ENSG00000187323|ENST00000442544|DCC	DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	DCC|p.Q1369Rfs*8|1|0.05|ENSG00000187323|chr18:53499504-53499505|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	500.3269225955009	2	500.326068	998.637583	3.0203	0.0015111	-1.2126	-0.00060671	1.8077	0.00090444	500.32547908387596	107.57	0.28015	107.73	107.58	107.86	0.15796					58	14	6	0	0	0	0.89803	2	46215	46215;46276		0	0	1	3293399999.9999995			41312	393	20180	20263	47628;47629	47628					0.13820961176588753
VVVDLGTG	8	Unmodified	_VVVDLGTG_					0	0	0		ENSG00000187003|ENST00000333999|ACTL7A	ENSG00000187003|ENST00000333999|ACTL7A	ENSG00000187003|ENST00000333999|ACTL7A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2173339724541	2	380.215986	758.417419	0.42024	0.00015978	3.6216	0.001377	4.0419	0.0015368	380.21728529081764	26.691	0.85982	28.438	28.129	28.988	1.747					70	28	3	0	0	0	0.89198	2	11135	11135;11176		0	0	1	15550000			41313	4813	20181	20264	47630;47631	47630					0.028547355690648146
VVVEGGLG	8	Unmodified	_VVVEGGLG_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-3|WDR90	REV__nc|ENSG00000161996|Q96KV7-3|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	365.2130004763603	2	365.210704	728.406855	0.56809	0.00020747	3.1468	0.0011492	3.7149	0.0013567	365.2119660520408	23.626	0.37299	23.859	23.69	24.063	0.23306					25	11	3	0	0	0	0.89198	1	9839	9839		0	0	1	835050	+		41314	10631	20182	20265	47632	47632					0.031787529146299676
VVVEGGLG	8	Unmodified	_VVVEGGLG_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-3|WDR90	REV__nc|ENSG00000161996|Q96KV7-3|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2105895876884	2	365.210704	728.406855	0.21999	8.0342E-05	2.4852	0.00090762	2.7052	0.00098796	365.21135794133727	25.399	0.519	26.658	26.468	26.987	1.2594					28	16	3	0	0	0	0.89198	1	10740	10740		0	0	1	1822500	+		41315	10631	20182	20265	47633	47633					0.031787529146299676
VVVEGGLG	8	Unmodified	_VVVEGGLG_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-3|WDR90	REV__nc|ENSG00000161996|Q96KV7-3|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	729.4210082888603	1	729.414131	728.406855	2.546	0.0018571	3.9372	0.0028718	6.4832	0.004729	729.416852079535	107.94	0.12938	108.1	108.03	108.15	0.15781					18	11	2	0	0	0	0.89198	1	46555	46555		0	0	1	71607000	+		41316	10631	20182	20265	47634	47634					0.031787529146299676
VVVEGGLG	8	Unmodified	_VVVEGGLG_					0	0	0			REV__nc|ENSG00000161996|Q96KV7-3|WDR90	REV__nc|ENSG00000161996|Q96KV7-3|WDR90	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	729.4245483279228	1	729.414131	728.406855	2.6421	0.0019272	2.6678	0.001946	5.31	0.0038732	729.4159656675506	107.93	0.11749	108.09	108.01	108.13	0.15796					16	9	2	0	0	0	0.89198	1	46485	46485		0	0	1	59777000	+		41317	10631	20182	20265	47635	47635					0.031787529146299676
VVVFLCVLI	9	Unmodified	_VVVFLCVLI_					0	0	0		ENST00000330714.7_1_21:42780169-42780397:+|nuORF	ENST00000330714.7_1_21:42780169-42780397:+|nuORF	ENST00000330714.7_1_21:42780169-42780397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.8148681521416	2	502.814282	1003.61401	0.89564	0.00045034	0.15921	8.0054E-05	1.0548	0.00053039	502.8143264285569	80.232	0.91013	81.948	81.291	82.201	1.7167					92	29	5	0	0	0	0.84963	1	33578	33578		0.6015	0	1	105580000			41318	5889	20183	20266	47636	47636					0.11234824138443855
VVVGAGVY	8	Unmodified	_VVVGAGVY_					0	0	0			REV__tr|A0A7D6VTF0|A0A7D6VTF0_9CLOTFlavocytochromecOS=ClostridiumintestinaleOX=36845GN=HZF06_08620PE=3SV=1	REV__tr|A0A7D6VTF0|A0A7D6VTF0_9CLOTFlavocytochromecOS=ClostridiumintestinaleOX=36845GN=HZF06_08620PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.2207519412041	2	382.221072	762.42759	2.6654	0.0010188	-3.0998	-0.0011848	-0.43442	-0.00016604	382.2197737959719	60.84	0.58482	62.805	62.482	63.067	1.9653					38	18	3	0	0	0	0.88958	1	25533	25533		2.8892	0	1	8025900	+		41319	15484	20184	20267	47637	47637					0.0368734329426843
VVVGAIQL	8	Unmodified	_VVVGAIQL_					0	0	0		tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	399.7573119997978	2	399.757821	797.501089	1.8932	0.0007568	-3.1222	-0.0012481	-1.2291	-0.00049134	399.7566850166143	78.232	0.51041	78.541	78.259	78.769	0.30933					47	15	4	0	0	0	0.89176	1	32720	32720		0.79363	0	1	6244400			41320	16105	20185	20268	47638	47638					0.09423891736753376
VVVGAIQL	8	Unmodified	_VVVGAIQL_					0	0	0		tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	tr|A0A553SGD6|A0A553SGD6_NIACIDUF4309domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_10685PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	399.7573730349541	2	399.757821	797.501089	1.7132	0.00068487	-2.9458	-0.0011776	-1.2326	-0.00049273	399.7567572170434	76.951	0.57436	78.719	78.419	78.993	1.7672					37	17	4	0	0	0	0.89176	1	32229	32229		0.79363	0	1	3602900			41321	16105	20185	20268	47639	47639					0.09423891736753376
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	928.5374023318291	1	928.534975	927.527698	2.0921	0.0019426	0.12967	0.00012041	2.2218	0.002063	928.535652165695	62.164	0.34398	62.164	62.024	62.368	0					23	10	3	0	0	0	0.028763	2	25949	25902;25949		89.427	18.711	1	1776300			41322	3677	20186	20269	47640;47641	47641					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.7722350955009	2	464.771126	927.527698	2.4787	0.001152	0.90881	0.00042239	3.3875	0.0015744	464.7717097342887	62.212	0.21878	62.212	62.086	62.305	0					10	6	2	0	0	0	0.15478	1	25937	25937		38.151	17.28	1	727510			41323	3677	20186	20269	47642	47642					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	928.5366088747978	1	928.534975	927.527698	2.0301	0.001885	0.59505	0.00055252	2.6251	0.0024375	928.5357533172713	61.727	0.40117	62.056	61.889	62.29	0.32974					26	12	3	0	0	0	0.031324	2	25907	25847;25907		85.357	17.14	1	1841800			41324	3677	20186	20269	47643;47644	47644					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	928.5378295779228	1	928.534975	927.527698	3.4194	0.0031751	-0.24733	-0.00022966	3.1721	0.0029454	928.5345995053194	60.684	0.44275	62.104	61.871	62.314	1.4196					32	13	3	0	0	0	0.022807	3	25408	25408;25454;25498		97.075	23.568	1	6065800			41325	3677	20186	20269	47645;47646;47647	47645					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	928.5374633669853	1	928.534975	927.527698	3.3516	0.0031121	0.2633	0.00024448	3.6149	0.0033566	928.5350266607725	60.199	0.40904	62.164	61.946	62.356	1.9653					28	12	3	0	0	0	0.0082953	3	25261	25211;25261;25315		109.63	27.765	1	5469200			41326	3677	20186	20269	47648;47649;47650	47649					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.7727844119072	2	464.771126	927.527698	3.4971	0.0016253	0.19	8.8306E-05	3.6871	0.0017136	464.77136608070805	60.155	0.34718	62.12	61.977	62.324	1.9653					16	10	2	0	0	0	0.087207	1	25249	25249		53.576	9.1686	1	2906100			41327	3677	20186	20269	47651	47651					0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	464.771126	927.527698	2.6538	0.0012334	1.2323	0.00057274	3.8861	0.0018061	464.7719923028192	61.774	0.21642	62.103	61.949	62.165	0.32974	-0.036751	0.00054247	NaN	53.576	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	719140			41328	3677	20186	20269							0.06103535837428353
VVVGDLVEV	9	Unmodified	_VVVGDLVEV_					0	0	0		nc|ENSG00000163399|P05023-3|ATP1A1;nc|ENSG00000163399|P05023-4|ATP1A1;ENSG00000163399|ENST00000295598|ATP1A1;ENST00000472488.5_1_1:160085570-160106822:+|nuORF;ENSG00000018625|ENST00000361216|ATP1A2;ATP1A2|p.F480Vfs*27|1|0.05|ENSG00000018625|chr1:160129376-160129377|-/GTCTCGAA|frameshift_variant;ATP1A2|p.F480Lfs*28|1|0.02|ENSG00000018625|chr1:160129378-160129379|-/GCTGGTCTCTG|frameshift_variant;nc|ENSG00000163399|P05023-2|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	nc|ENSG00000163399|P05023-3|ATP1A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	464.771126	927.527698	3.4641	0.00161	0.7915	0.00036787	4.2556	0.0019779	464.77161170259194	60.705	0.34659	62.125	61.903	62.249	1.4196	-0.015552	0.00013273	NaN	53.576	16	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1453800			41329	3677	20186	20269							0.06103535837428353
VVVGPKPK	8	Unmodified	_VVVGPKPK_					0	0	0			REV__ENST00000594188.1_1_19:50922219-50926375:+|nuORF	REV__ENST00000594188.1_1_19:50922219-50926375:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	412.2714721560478	2	412.273638	822.532724	0.2395	9.8741E-05	-2.7803	-0.0011462	-2.5408	-0.0010475	412.27230947665583	33.437	0.92465	33.437	33.296	34.221	0					51	29	2	0	0	0	0.89178	1	14164	14164		0.69038	0	1	1897700	+		41330	14086	20187	20270	47652	47652					0.1143588449069739
VVVGRALL	8	Unmodified	_VVVGRALL_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	826.5521728396416	1	826.550899	825.543623	2.8503	0.002356	0.22096	0.00018263	3.0713	0.0025386	826.5506787745913	107.06	0.2861	107.22	107.03	107.32	0.15781					26	12	4	0	0	0	0.89176	1	45958	45958		0.79363	0	1	32373000			41331	4142	20188	20271	47653	47653					0.12387286864998259
VVVGRALL	8	Unmodified	_VVVGRALL_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	826.550899	825.543623	1.244	0.0010283	2.4178	0.0019984	3.6618	0.0030267	826.5526556277762	107.14	0.1429	107.14	107.05	107.19	0	-0.03231	0.001927	NaN	0.79363	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8193300			41332	4142	20188	20271							0.12387286864998259
VVVGRALL	8	Unmodified	_VVVGRALL_					0	0	0		ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	ENSG00000170382|ENST00000367177|LRRN2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	826.550899	825.543623	2.7696	0.0022892	-0.77077	-0.00063708	1.9988	0.0016521	826.5506377459474	107.07	0.12912	107.13	107.07	107.2	0.052452	-0.047122	-0.00070846	NaN	0.79363	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7973100			41333	4142	20188	20271							0.12387286864998259
VVVGVGLIVG	10	Unmodified	_VVVGVGLIVG_					0	0	0		ENPEP|p.S420Vfs*4|1|0.04|ENSG00000138792|chr4:110510307-110510308|-/G|frameshift_variant;ENSG00000138792|ENST00000265162|ENPEP	ENPEP|p.S420Vfs*4|1|0.04|ENSG00000138792|chr4:110510307-110510308|-/G|frameshift_variant	ENPEP|p.S420Vfs*4|1|0.04|ENSG00000138792|chr4:110510307-110510308|-/G|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	456.3012267947197	2	456.299853	910.585153	1.2961	0.00059141	1.0714	0.00048889	2.3675	0.0010803	456.30033066101237	107.75	0.36626	107.75	107.58	107.95	0					66	19	6	0	0	0	0.89803	2	46239	46239;46314		0	0	1	1410100000			41334	451	20189	20272	47654;47655	47654					0.12628422833677178
VVVIAAIVLA	10	Unmodified	_VVVIAAIVLA_					0	0	0		nc|ENSG00000162391|Q8WW52-2|FAM151A;ENSG00000162391|ENST00000302250|FAM151A	nc|ENSG00000162391|Q8WW52-2|FAM151A	nc|ENSG00000162391|Q8WW52-2|FAM151A	MSMS	GG20161007_CRH_Patient100_A02_01	1	323.2218505740166	3	323.223194	966.647754	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.89	1	104.89	104.39	105.39	0								0	0	0	0.66254	1	44385	44385		0.15932	0	1				41335	3615	20190	20273	47656	47656					0.16309568901817784
VVVKGKLK	8	Unmodified	_VVVKGKLK_					0	0	0		ENSG00000206432|ENST00000383490|TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	435.8105956912041	2	435.810388	869.606223	3.1668	0.0013801	-2.4305	-0.0010592	0.73624	0.00032086	435.8092755909011	109.16	0.87575	109.21	108.75	109.62	0.048843					91	38	3	0	0	0	0.89198	1	47128	47128		0	0	1	30048000			41336	5196	20191	20274	47657	47657					0.16620432933154916
VVVKGKLK	8	Unmodified	_VVVKGKLK_					0	0	0		ENSG00000206432|ENST00000383490|TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	ENSG00000206432|ENST00000383490|TMEM200C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	435.8108703494072	2	435.810388	869.606223	3.3339	0.001453	-2.6441	-0.0011523	0.68988	0.00030066	435.80933042662883	109.13	0.78305	109.28	108.97	109.75	0.15898					82	36	3	0	0	0	0.89198	1	47262	47262		0	0	1	31842000			41337	5196	20191	20274	47658	47658					0.16620432933154916
VVVLGPRLV	9	Unmodified	_VVVLGPRLV_					0	0	0			REV__ENST00000592624.1_1_19:1242319-1242811:+|nuORF	REV__ENST00000592624.1_1_19:1242319-1242811:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.1958190798759	3	317.883172	950.627687	-2.3835	-0.00075769	-2.6351	-0.00083766	-5.0187	-0.0015954	317.88240242034925	37.938	0.80759	37.938	37.364	38.172	0					49	28	2	0	0	0	0.11941	1	15702	15702		1.0715	0	1	4641600	+		41338	8951	20192	20275	47659	47659					0.15039817961894641
VVVLGPRLV	9	Unmodified	_VVVLGPRLV_					0	0	0			REV__ENST00000592624.1_1_19:1242319-1242811:+|nuORF	REV__ENST00000592624.1_1_19:1242319-1242811:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	317.883172	950.627687	-1.0556	-0.00033556	-4.6682	-0.001484	-5.7238	-0.0018195	317.88175883846253	36.699	0.51685	37.975	37.667	38.184	1.2762	0.018834	-0.0012365	NaN	1.0715	32	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2448400	+		41339	8951	20192	20275							0.15039817961894641
VVVLLFIAL	9	Unmodified	_VVVLLFIAL_					0	0	0		ENST00000370651.5_1_6:64288881-64289184:+|nuORF	ENST00000370651.5_1_6:64288881-64289184:+|nuORF	ENST00000370651.5_1_6:64288881-64289184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	493.8363220095634	2	493.836071	985.65759	0.91676	0.00045273	-0.94259	-0.00046548	-0.025829	-1.2756E-05	493.8360224463902	109.53	0.65464	109.53	109.3	109.96	0					55	26	3	0	0	0	0.85403	2	47391	47391;47455		0	0	1	12042000			41340	6119	20193	20276	47660;47661	47660					0.16418756907205534
VVVLLFIAL	9	Unmodified	_VVVLLFIAL_					0	0	0		ENST00000370651.5_1_6:64288881-64289184:+|nuORF	ENST00000370651.5_1_6:64288881-64289184:+|nuORF	ENST00000370651.5_1_6:64288881-64289184:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	493.8368713259697	2	493.836071	985.65759	3.4118	0.0016849	-1.3192	-0.00065147	2.0927	0.0010334	493.83519360849675	109.57	0.61338	109.62	109.31	109.93	0.048851					55	23	4	0	0	0	0.85403	1	47236	47236		0	0	1	7731700			41341	6119	20193	20276	47662	47662					0.16418756907205534
VVVLLTLKI	9	Unmodified	_VVVLLTLKI_					0	0	0			REV__tr|A0A553SRC7|A0A553SRC7_NIACISulfateABCtransporterpermeasesubunitCysWOS=NialliacirculansOX=1397GN=cysWPE=4SV=1	REV__tr|A0A553SRC7|A0A553SRC7_NIACISulfateABCtransporterpermeasesubunitCysWOS=NialliacirculansOX=1397GN=cysWPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	997.7006103396416	1	997.70198	996.694704	1.2181	0.0012153	-1.2059	-0.0012031	0.012191	1.2163E-05	997.7003175388519	106.83	0.53571	106.83	106.36	106.9	0					47	25	2	0	0	0	0.85403	1	45672	45672		0	0	1	44706000	+		41342	15155	20194	20277	47663	47663					0.19622428452976237
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5354797244072	3	309.535549	925.584819	-0.0065825	-2.0375E-06	1.2891	0.00039904	1.2826	0.000397	309.5359208392394	26.474	0.37729	28.221	28.068	28.445	1.747					28	12	3	0	0	0	0.80869	1	11086	11086		2.9952	0.26005	1	5340300			41343	4687	20195	20278	47664	47664					0.11905003113815837
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	309.535549	925.584819	0.33584	0.00010395	3.0452	0.00094259	3.381	0.0010465	309.5364191956155	28.16	0.54825	28.431	28.149	28.697	0.27119	0.11149	0.00077304	NaN	2.9952	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3150600			41344	4687	20195	20278							0.11905003113815837
VVVLTSLPV	9	Unmodified	_VVVLTSLPV_					0	0	0		nc|ENSG00000184307|Q8IYP9|ZDHHC23;ENSG00000184307|ENST00000638807|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	nc|ENSG00000184307|Q8IYP9|ZDHHC23	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	309.535549	925.584819	-0.11742	-3.6347E-05	2.3014	0.00071237	2.184	0.00067602	309.53616661965884	27.035	0.56883	28.306	28.174	28.743	1.2715	-0.01296	8.2371E-05	NaN	2.9952	36	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5854200			41345	4687	20195	20278							0.11905003113815837
VVVPAGGS	8	Unmodified	_VVVPAGGS_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.3918334841728	1	685.387916	684.38064	2.6876	0.0018421	2.9332	0.0020104	5.6208	0.0038525	685.3891343254799	108.04	0.15495	108.09	108	108.16	0.050644					19	7	3	0	0	0	0.89198	1	46356	46356		0	0	1	94377000			41346	527	20196	20279	47665	47665					0.025824837431514425
VVVPAGGS	8	Unmodified	_VVVPAGGS_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	685.3917114138603	1	685.387916	684.38064	2.8306	0.00194	1.1922	0.00081715	4.0228	0.0027572	685.3871507869535	108	0.14284	108.16	108.07	108.22	0.15781					24	16	2	0	0	0	0.89198	1	46588	46588		0	0	1	42268000			41347	527	20196	20279	47666	47666					0.025824837431514425
VVVPAGGS	8	Unmodified	_VVVPAGGS_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1993286013603	2	343.197596	684.38064	-0.048804	-1.6749E-05	3.9965	0.0013716	3.9477	0.0013548	343.19915667099303	20.468	0.92052	22.043	21.639	22.559	1.5748					84	30	5	0	0	0	0.89198	3	8503	8503;8542;8581		0	0	1	240480000			41348	527	20196	20279	47667;47668;47669	47667					0.025824837431514425
VVVPAGGS	8	Unmodified	_VVVPAGGS_					0	0	0		ENSG00000008226|ENST00000308059|DLEC1;nc|ENSG00000008226|Q9Y238-3|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	ENSG00000008226|ENST00000308059|DLEC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	685.3932372927666	1	685.387916	684.38064	2.7059	0.0018546	1.8315	0.0012553	4.5374	0.0031099	685.3880020312357	107.96	0.15936	108.12	108.05	108.2	0.15795					29	18	2	0	0	0	0.89198	1	46507	46507		0	0	1	85182000			41349	527	20196	20279	47670	47670					0.025824837431514425
VVVPKPLKAMK	11	Unmodified	_VVVPKPLKAMK_					0	0	0			REV__nc|ENSG00000188385|Q5VZ66|JAKMIP3	REV__nc|ENSG00000188385|Q5VZ66|JAKMIP3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	303.1990844607353	4	303.199248	1208.76789	-2.6152	-0.00079291	2.0673	0.0006268	-0.54788	-0.00016612	303.19974912720943	33.008	0.91563	33.008	32.318	33.233	0					92	30	4	0	0	0	1.0362	1	13734	13734		1.3296	0.70282	1	5247200	+		41350	11569	20197	20280	47671	47671					0.17185233903933295
VVVQIAKK	8	Unmodified	_VVVQIAKK_					0	0	0		tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	884.5936157107353	1	884.592764	883.585488	2.8048	0.0024811	-1.2178	-0.0010772	1.5871	0.0014039	884.5915151842929	107.76	0.27049	107.81	107.68	107.95	0.052452					51	14	5	0	0	0	0.89178	1	46217	46217		0.69038	0	1	1661199999.9999998			41351	16890	20198	20281	47672	47672					0.13903842553497725
VVVQIAKK	8	Unmodified	_VVVQIAKK_					0	0	0		tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	tr|A0A7D6VSY1|A0A7D6VSY1_9CLOTMagnesium-transportingATPase,P-type1OS=ClostridiumintestinaleOX=36845GN=mgtAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	884.5945312380791	1	884.592764	883.585488	3.0217	0.0026729	-0.89253	-0.00078953	2.1291	0.0018834	884.5918820217089	108.33	0.9708	108.49	108.32	109.29	0.15781					94	50	3	0	0	0	0.89178	1	46830	46830		0.69038	0	1	80099000			41352	16890	20198	20281	47673	47673					0.13903842553497725
VVVSGLLQ	8	Unmodified	_VVVSGLLQ_					0	0	0		nc|ENSG00000213901|Q6PIS1-2|SLC23A3;SLC23A3|p.L516Rfs*52|1|0.24|ENSG00000213901|chr2:219162183-219162196|AGGCCTCGCTCAAG/-|frameshift_variant;ENSG00000213901|ENST00000409878|SLC23A3;nc|ENSG00000213901|Q6PIS1-5|SLC23A3;ENST00000497918.5_1_2:220033318-220033813:-|nuORF;SLC23A3|p.S254Qfs*15|1|0.31|ENSG00000213901|chr2:219168234-219168234|T/-|frameshift_variant	nc|ENSG00000213901|Q6PIS1-2|SLC23A3	nc|ENSG00000213901|Q6PIS1-2|SLC23A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	407.7554809451103	2	407.755278	813.496004	3.1877	0.0012998	-2.3708	-0.00096672	0.81691	0.0003331	407.7538085607695	60.299	0.53397	62.265	62.073	62.607	1.9653					21	16	2	0	0	0	0.89008	1	25330	25330		2.5775	0	1	754990			41353	5232	20199	20282	47674	47674					0.08179587874133176
VVVSIASLIV	10	Unmodified	_VVVSIASLIV_					0	0	0			REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	500.3255187869072	2	500.326068	998.637583	2.2966	0.0011491	-2.9298	-0.0014658	-0.63315	-0.00031678	500.32464122241277	52.42	0.25063	52.746	52.589	52.84	0.32553					13	7	2	0	0	0	0.41677	1	21973	21973		32.305	0	1	771880	+		41354	13797	20200	20283	47675	47675					0.13820961176600122
VVVSIASLIV	10	Unmodified	_VVVSIASLIV_					0	0	0			REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	500.326068	998.637583	2.2966	0.0011491	-2.9298	-0.0014658	-0.63315	-0.00031678	500.32464122241277	52.42	0.25063	52.746	52.589	52.84	0.32553	0.14475	-0.00035973	NaN	32.305	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	771880	+		41355	13797	20200	20283							0.13820961176600122
VVVSIASLIV	10	Unmodified	_VVVSIASLIV_					0	0	0			REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	REV__ENST00000544293.1_1_11:73879278-73881837:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	500.326068	998.637583	0.78554	0.00039302	-2.0752	-0.0010383	-1.2897	-0.00064526	500.82595467520105	51.063	0.27133	52.456	52.287	52.558	1.3938	-0.14475	0.0004954	NaN	32.305	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1380600	+		41356	13797	20200	20283							0.13820961176600122
VVVSRIIV	8	Unmodified	_VVVSRIIV_					0	0	0		ENSG00000010327|ENST00000321725|STAB1;tr|A0A7D7A4I4|A0A7D7A4I4_9CLOTUPF0316proteinHZF06_01905OS=ClostridiumintestinaleOX=36845GN=HZF06_01905PE=3SV=1	ENSG00000010327|ENST00000321725|STAB1	ENSG00000010327|ENST00000321725|STAB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	884.5942260622978	1	884.592764	883.585488	1.1598	0.0010259	0.56778	0.00050226	1.7276	0.0015282	884.5931722944027	107.78	0.28372	107.78	107.67	107.95	0					52	15	5	0	0	0	0.89176	1	46328	46328		0.79363	0	1	2353200000			41357	553	20201	20284	47676	47676					0.13903842553520462
VVVSRIIV	8	Unmodified	_VVVSRIIV_					0	0	0		ENSG00000010327|ENST00000321725|STAB1;tr|A0A7D7A4I4|A0A7D7A4I4_9CLOTUPF0316proteinHZF06_01905OS=ClostridiumintestinaleOX=36845GN=HZF06_01905PE=3SV=1	ENSG00000010327|ENST00000321725|STAB1	ENSG00000010327|ENST00000321725|STAB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	884.592764	883.585488	3.1188	0.0027589	-1.0274	-0.00090881	2.0914	0.00185	884.591945974606	107.51	0.48462	107.67	107.27	107.75	0.15796	-0.087357	-0.00087004	NaN	0.79363	49	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13879000			41358	553	20201	20284							0.13903842553520462
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2436706423759	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.364	1	83.364	82.864	83.864	0								0	0	0	0.66264	1	34736	34736		0	0	1				41359	637	20202	20285	47677	47677					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2435790896416	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.505	1	83.505	83.005	84.005	0								0	0	0	0.66264	1	34796	34796		0	0	1				41360	637	20202	20285	47678	47678					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2441894412041	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.633	1	83.633	83.133	84.133	0								0	0	0	0.66264	1	34850	34850		0	0	1				41361	637	20202	20285	47679	47679					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2440978884697	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.763	1	83.763	83.263	84.263	0								0	0	0	0.66264	1	34904	34904		0	0	1				41362	637	20202	20285	47680	47680					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2421142458916	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.979	1	83.979	83.479	84.479	0								0	0	0	0.66254	1	34996	34996		0.15932	0	1				41363	637	20202	20285	47681	47681					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_01	1	347.2437927126884	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.491	1	84.491	83.991	84.991	0								0	0	0	0.66264	1	35211	35211		0	0	1				41364	637	20202	20285	47682	47682					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2439453005791	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.228	1	83.499	82.999	83.999	0.27029								0	0	0	0.66254	1	34807	34807		0.15932	0	1				41365	637	20202	20285	47683	47683					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2442199587822	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.526	1	83.796	83.296	84.296	0.27029								0	0	0	0.66264	1	34933	34933		0	0	1				41366	637	20202	20285	47684	47684					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2434570193291	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.663	1	83.934	83.434	84.434	0.27029								0	0	0	0.66264	1	34990	34990		0	0	1				41367	637	20202	20285	47685	47685					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2439453005791	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.895	1	84.156	83.656	84.656	0.26083								0	0	0	0.66264	1	35091	35091		0	0	1				41368	637	20202	20285	47686	47686					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2429687380791	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.215	1	84.476	83.976	84.976	0.26083								0	0	0	0.66264	1	35223	35223		0	0	1				41369	637	20202	20285	47687	47687					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_A02_02	2	347.2427551150322	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.35	1	100.42	99.922	100.92	0.072716								0	0	0	0.66254	1	42013	42013		0.15932	0	1				41370	637	20202	20285	47688	47688					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_W632_01	3	347.2440063357353	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.021	1	83.234	82.734	83.734	1.2125								0	0	0	0.66254	1	34434	34434		0.15932	0	1				41371	637	20202	20285	47689	47689					0.18746411107440508
VVVTAVLILL	10	Unmodified	_VVVTAVLILL_					0	0	0		nc|ENSG00000032444|Q8IY17-5|PNPLA6;nc|ENSG00000032444|Q8IY17-2|PNPLA6;ENSG00000032444|ENST00000600737|PNPLA6;nc|ENSG00000032444|Q8IY17-3|PNPLA6;nc|ENSG00000032444|Q8IY17|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	nc|ENSG00000032444|Q8IY17-5|PNPLA6	MSMS	GG20161007_CRH_Patient100_W632_02	4	347.2439453005791	3	347.242366	1038.70527	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.976	1	83.646	83.146	84.146	1.67								0	0	0	0.66254	1	34391	34391		0.15932	0	1				41372	637	20202	20285	47690	47690					0.18746411107440508
VVVTTTEL	8	Unmodified	_VVVTTTEL_					0	0	0		CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant;nc|ENSG00000107736|Q9H251-4|CDH23;nc|ENSG00000107736|Q9H251-2|CDH23;nc|ENSG00000107736|Q9H251-3|CDH23;ENSG00000107736|ENST00000224721|CDH23;nc|ENSG00000107736|Q9H251-8|CDH23;nc|ENSG00000107736|Q9H251-6|CDH23	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	CDH23|p.L2204Vfs*16|1|0.07|ENSG00000107736|chr10:71793387-71793388|-/GTATTTAAGG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	861.4949218630791	1	861.492775	860.485499	3.0064	0.00259	-0.49787	-0.00042891	2.5085	0.0021611	861.4916256471441	107.81	0.12717	107.96	107.88	108.01	0.15781					11	6	2	0	0	0	0.89198	1	46454	46454		0	0	1	43575000			41373	139	20203	20286	47691	47691					0.04967560429031437
VVVTVLLL	8	Unmodified	_VVVTVLLL_					0	0	0			REV__ENSG00000181499|ENST00000321252|OR6T1	REV__ENSG00000181499|ENST00000321252|OR6T1	MSMS	GG20161007_CRH_Patient100_W632_02	4	428.3001586794853	2	428.299322	854.584091	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.6	1	100.8	100.3	101.3	0.20527								0	0	0	1.0178	1	42302	42302		0.79363	0	1		+		41374	11323	20204	20287	47692	47692					0.15098208464758045
VVVVAITAAL	10	Unmodified	_VVVVAITAAL_					0	0	0			REV__ENSG00000163982|ENST00000296358|OTOP1	REV__ENSG00000163982|ENST00000296358|OTOP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	955.6197997927666	1	955.618645	954.611368	1.1728	0.0011207	-0.26422	-0.0002525	0.90855	0.00086822	955.6177002088576	107.69	0.14711	107.69	107.62	107.77	0					25	7	4	0	0	0	0.89803	1	46229	46229		0	0	1	75277000	+		41375	10710	20205	20288	47693	47693					0.13224692005110228
VVVVAITAAL	10	Unmodified	_VVVVAITAAL_					0	0	0			REV__ENSG00000163982|ENST00000296358|OTOP1	REV__ENSG00000163982|ENST00000296358|OTOP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	478.3142578005791	2	478.312961	954.611368	3.5503	0.0016981	-0.99853	-0.00047761	2.5517	0.0012205	478.3124447597302	107.69	0.29393	107.74	107.6	107.89	0.052444					63	15	7	0	0	0	0.89803	2	46077	46077;46138		0	0	1	830590000	+		41376	10710	20205	20288	47694;47695	47694					0.13224692005110228
VVVVAITAAL	10	Unmodified	_VVVVAITAAL_					0	0	0			REV__ENSG00000163982|ENST00000296358|OTOP1	REV__ENSG00000163982|ENST00000296358|OTOP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.3147155642509	2	478.312961	954.611368	3.2661	0.0015622	-0.60953	-0.00029154	2.6565	0.0012707	478.31284619259037	107.66	0.25531	107.82	107.68	107.93	0.15781					56	13	6	0	0	0	0.89803	1	46381	46381		0	0	1	9410900000	+		41377	10710	20205	20288	47696	47696					0.13224692005110228
VVVVLIVS	8	Unmodified	_VVVVLIVS_					0	0	0		tr|A0A7D7ADG9|A0A7D7ADG9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22870PE=4SV=1	tr|A0A7D7ADG9|A0A7D7ADG9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22870PE=4SV=1	tr|A0A7D7ADG9|A0A7D7ADG9_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22870PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	414.2853576540947	2	414.283672	826.552791	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.53	1	104.69	104.19	105.19	0.16055								0	0	0	1.0178	1	44306	44306		0.69038	0	1				41378	17324	20206	20289	47697	47697					0.1325763543067069
VVWGTVIRV	9	Unmodified	_VVWGTVIRV_					0	0	0		nc|ENSG00000198198|Q5T011-5|SZT2;ENSG00000198198|ENST00000634258|SZT2	nc|ENSG00000198198|Q5T011-5|SZT2	nc|ENSG00000198198|Q5T011-5|SZT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	515.2755615115166	2	514.816202	1027.61785	0.94583	0.00048693	-1.6238	-0.00083594	-0.67793	-0.00034901	514.816226176655	57.33	0.20841	58.745	58.667	58.875	1.4145					12	7	2	0	0	0	0.095873	1	24011	24011		26.268	7.0112	1	2363000			41379	5045	20207	20290	47698	47698					0.10514629956514909
VVWKIDRL	8	Unmodified	_VVWKIDRL_					0	0	0		nc|ENSG00000243244|Q9Y6Q2-2|STON1;ENSG00000068781|ENST00000394754|STON1-GTF2A1L;ENSG00000243244|ENST00000404752|STON1;nc|ENSG00000243244|Q9Y6Q2-3|STON1	nc|ENSG00000243244|Q9Y6Q2-2|STON1	nc|ENSG00000243244|Q9Y6Q2-2|STON1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	515.2768432497978	2	514.816202	1027.61785	1.1213	0.00057724	-0.48071	-0.00024748	0.64055	0.00032977	514.8171022551873	56.722	0.29713	58.69	58.516	58.814	1.9684					15	9	2	0	0	0	2.3239	1	23777	23777		12.532	0	1	1919100			41380	835	20208	20291	47699	47699					0.10514629956514909
VVWLKKSH	8	Unmodified	_VVWLKKSH_					0	0	0			REV__tr|A0A553SIG3|A0A553SIG3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14705PE=4SV=1	REV__tr|A0A553SIG3|A0A553SIG3_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_14705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	498.8058654665947	2	498.803094	995.591636	2.2627	0.0011287	1.5511	0.00077371	3.8139	0.0019024	498.80374542426154	39.929	0.61578	40.242	39.892	40.508	0.31263					57	19	4	0	0	0	0.89051	1	16683	16683		2.3027	0.24298	1	13361000	+		41381	14848	20209	20292	47700	47700					0.09366360785031702
VVWRSITA	8	Unmodified	_VVWRSITA_					0	0	0		ENST00000449849.2_1_2:203789500-203789902:+|nuORF	ENST00000449849.2_1_2:203789500-203789902:+|nuORF	ENST00000449849.2_1_2:203789500-203789902:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1849548220634	3	311.18351	930.528701	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.31	1	103.49	102.99	103.99	0.18066								0	0	0	1.0178	1	43484	43484		1.6526	0	1				41382	6601	20210	20293	47701	47701					0.06065794996993645
VVYVEYEANW	10	Unmodified	_VVYVEYEANW_					0	0	0			REV__ENST00000530090.1_1_11:113130828-113133644:+|nuORF	REV__ENST00000530090.1_1_11:113130828-113133644:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.3013793826103	2	636.300778	1270.587	1.3339	0.00084876	-3.484	-0.0022169	-2.1501	-0.0013681	636.2990095584632	71.654	0.34242	72.996	72.779	73.122	1.3415					25	10	3	0	0	0	0.846	1	30041	30041		7.2892	0	1	1701600	+		41383	10367	20211	20294	47702	47702					-0.03746612939062288
VVYVEYEANW	10	Unmodified	_VVYVEYEANW_					0	0	0			REV__ENST00000530090.1_1_11:113130828-113133644:+|nuORF	REV__ENST00000530090.1_1_11:113130828-113133644:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	636.300778	1270.587	1.3339	0.00084876	-3.484	-0.0022169	-2.1501	-0.0013681	636.2990095584632	71.654	0.34242	72.996	72.779	73.122	1.3415	-0.036369	-0.00054179	NaN	7.2892	25	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1701600	+		41384	10367	20211	20294							-0.03746612939062288
VWAKLVRRFKA	11	Unmodified	_VWAKLVRRFKA_					0	0	0			REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	REV__ENST00000510927.5_1_4:106967729-107168455:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	458.6242248415947	3	458.622463	1372.84556	1.6649	0.00076354	1.8309	0.00083967	3.4957	0.0016032	458.6232150370628	96.737	0.19794	96.737	96.602	96.8	0					19	6	4	0	0	0	1.0395	1	40462	40462		0.08335	0	1	44086000	+		41385	10272	20212	20295	47703	47703					0.17405007884349288
VWALPVITV	9	Unmodified	_VWALPVITV_					0	0	0		tr|A0A7D6ZE49|A0A7D6ZE49_9CLOTChromateeffluxtransporterOS=ClostridiumintestinaleOX=36845GN=chrAPE=3SV=1	tr|A0A7D6ZE49|A0A7D6ZE49_9CLOTChromateeffluxtransporterOS=ClostridiumintestinaleOX=36845GN=chrAPE=3SV=1	tr|A0A7D6ZE49|A0A7D6ZE49_9CLOTChromateeffluxtransporterOS=ClostridiumintestinaleOX=36845GN=chrAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	499.3089782595634	2	499.307678	996.600803	2.0083	0.0010028	2.5186	0.0012576	4.527	0.0022603	499.3070460774012	48.266	0.3993	50.243	49.959	50.359	1.9772					22	12	3	0	0	0	0.44512	1	20244	20244		13.508	0	1	1390000			41386	17049	20213	20296	47704	47704					0.10236709350681394
VWALRLRGV	9	Unmodified	_VWALRLRGV_					0	0	0			REV__ENST00000471142.5_1_7:45147368-45148836:-|nuORF	REV__ENST00000471142.5_1_7:45147368-45148836:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	357.2239257693291	3	357.225821	1068.65563	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.325	1	21.451	20.951	21.951	1.1254								0	0	0	0.42693	1	8468	8468		1.1933	0	1		+		41387	9979	20214	20297	47705	47705					0.12405140941973514
VWAWHLRSP	9	Unmodified	_VWAWHLRSP_					0	0	0		ENST00000590071.6_1_19:34981284-34981356:+|nuORF	ENST00000590071.6_1_19:34981284-34981356:+|nuORF	ENST00000590071.6_1_19:34981284-34981356:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	385.1542541384697	3	384.541809	1150.6036	2.5292	0.0009726	0.22119	8.5058E-05	2.7504	0.0010577	384.54166166110895	60.684	0.69362	62.104	61.903	62.596	1.4196					29	21	2	0	0	0	0.11909	1	25456	25456		2.4985	0	1	1501700			41388	7480	20215	20298	47706	47706					0.034319775282028786
VWEITGAEF	9	Unmodified	_VWEITGAEF_					0	0	0		nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3;nc|ENSG00000005156|P49916-4|LIG3;nc|ENSG00000005156|P49916-3|LIG3;ENST00000593099.5_1_17:33326330-33329895:+|nuORF	nc|ENSG00000005156|P49916-2|LIG3	nc|ENSG00000005156|P49916-2|LIG3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1051.507983386517	1	1051.50949	1050.50221	2.9343	0.0030855	-0.50689	-0.000533	2.4275	0.0025525	1051.5091824298763	68.324	0.19305	70.194	70.105	70.298	1.87					8	5	2	0	0	0	0.46905	1	28700	28700		16.942	3.8998	1	453170			41389	481	20216	20299	47707	47707					-0.021019386850184674
VWEITGAEF	9	Unmodified	_VWEITGAEF_					0	0	0		nc|ENSG00000005156|P49916-2|LIG3;ENSG00000005156|ENST00000378526|LIG3;nc|ENSG00000005156|P49916-4|LIG3;nc|ENSG00000005156|P49916-3|LIG3;ENST00000593099.5_1_17:33326330-33329895:+|nuORF	nc|ENSG00000005156|P49916-2|LIG3	nc|ENSG00000005156|P49916-2|LIG3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	1051.50949	1050.50221	2.174	0.002286	0.36669	0.00038558	2.5407	0.0026715	1051.5077237267303	68.883	0.22675	70.249	70.154	70.381	1.3657	0.027224	0.00038839	NaN	16.942	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	508250			41390	481	20216	20299							-0.021019386850184674
VWFNIGSVDTF	11	Unmodified	_VWFNIGSVDTF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.8188964724541	2	642.816596	1283.61864	5.5371	0.0035593	0.67512	0.00043398	6.2122	0.0039933	642.8170808059231	88.683	0.38668	89.739	89.466	89.853	1.0562					22	11	3	0	0	0	0.02806	2	37405	37355;37405		81.89	57.87	1	3141900			41391	2957	20217	20300	47708;47709	47709					-0.01182620185113592
VWFNIGSVDTF	11	Unmodified	_VWFNIGSVDTF_					0	0	0		ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	ENSG00000141385|ENST00000269143|AFG3L2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	642.8177368044853	2	642.816596	1283.61864	4.4844	0.0028826	0.037355	2.4013E-05	4.5217	0.0029066	642.8167296943254	88.301	0.34894	89.747	89.54	89.889	1.4467					23	10	3	0	0	0	0.14477	2	37183	37183;37249		47.749	18.667	1	3332300			41392	2957	20217	20300	47710;47711	47710					-0.01182620185113592
VWFPDMMPTW	10	Oxidation (M)	_VWFPDM(Oxidation (M))MPTW_		VWFPDM(0.961)M(0.039)PTW		VWFPDM(14)M(-14)PTW	0	0	1		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.2892333865166	2	663.288302	1324.56205	4.3806	0.0029056	-0.59977	-0.00039782	3.7808	0.0025078	663.2877892373477	87.433	0.40012	88.525	88.366	88.766	1.0918					29	12	3	0	0	0	0.051733	2	36876	36876;36926		78.149	63.311	2	2010100			41393	494	20218	20301	47712;47713	47712		5			-0.08724707337637483
VWFPDMMPTW	10	Oxidation (M)	_VWFPDM(Oxidation (M))MPTW_		VWFPDM(0.995)M(0.005)PTW		VWFPDM(23)M(-23)PTW	0	0	1		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.2880126833916	2	663.288302	1324.56205	4.4954	0.0029818	-1.1215	-0.0007439	3.3739	0.0022379	663.2869120980896	87.057	0.37099	88.552	88.332	88.703	1.4953					31	11	3	0	0	0	0.051733	2	36680	36680;36733		78.149	62.901	2	1695300			41394	494	20218	20301	47714;47715	47714		5			-0.08724707337637483
VWFPDMMPTW	10	Unmodified	_VWFPDMMPTW_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.2947265505791	2	655.290845	1308.56714	3.5744	0.0023423	1.8971	0.0012431	5.4714	0.0035854	655.2924833086452	96.876	0.14717	97.161	97.047	97.194	0.28442					9	4	3	0	0	0	0.16957	1	40760	40760		128.37	106.83	1	5917600			41395	494	20218	20302	47716	47716					-0.07480403475005915
VWFPDMMPTW	10	Unmodified	_VWFPDMMPTW_					0	0	0		ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	ENSG00000005812|ENST00000355619|FBXL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.2953979372978	2	655.290845	1308.56714	3.2278	0.0021152	1.7838	0.0011689	5.0116	0.0032841	655.2928063269774	96.779	0.1898	97.085	96.975	97.164	0.3062					12	5	3	0	0	0	0.2606	1	40700	40700		133.7	108.3	1	6732100			41396	494	20218	20302	47717	47717					-0.07480403475005915
VWFRIPNQF	9	Unmodified	_VWFRIPNQF_					0	0	0		HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant;ENSG00000013583|ENST00000014930|HEBP1	HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant	HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.8258544802666	2	603.824558	1205.63456	2.0735	0.0012521	0.092214	5.5681E-05	2.1658	0.0013077	603.8248065115642	68.842	0.56753	70.207	69.904	70.472	1.3657					41	17	3	0	0	0	0.0066739	2	28891	28840;28891		115.69	85.467	1	3724200			41397	588	20219	20303	47718;47719	47719					0.039971308424583185
VWFRIPNQF	9	Unmodified	_VWFRIPNQF_					0	0	0		HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant;ENSG00000013583|ENST00000014930|HEBP1	HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant	HEBP1|p.R152Lfs*24|1|0.04|ENSG00000013583|chr12:12975423-12975423|C/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.8256713747978	2	603.824558	1205.63456	2.2334	0.0013486	0.069995	4.2265E-05	2.3034	0.0013908	603.824946549473	68.215	0.65996	70.085	69.796	70.456	1.87					44	20	3	0	0	0	0.00032761	1	28630	28630		136.33	92.475	1	3628800			41398	588	20219	20303	47720	47720					0.039971308424583185
VWGHSYEF	8	Unmodified	_VWGHSYEF_					0	0	0		tr|A0A7D6VSJ3|A0A7D6VSJ3_9CLOTPolysaccharidedeacetylasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07020PE=3SV=1	tr|A0A7D6VSJ3|A0A7D6VSJ3_9CLOTPolysaccharidedeacetylasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07020PE=3SV=1	tr|A0A7D6VSJ3|A0A7D6VSJ3_9CLOTPolysaccharidedeacetylasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07020PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	342.1563293337822	3	342.15562	1023.44503	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.473	1	54.794	54.294	55.294	0.32088								0	0	0	1.0178	1	22811	22811		0.45834	0	1				41399	16872	20220	20304	47721	47721					-0.06575361170723681
VWILCEAHCL	10	Unmodified	_VWILCEAHCL_					0	0	0		nc|ENSG00000168961|O00182-3|LGALS9;nc|ENSG00000168961|O00182-2|LGALS9;nc|ENSG00000168961|O00182-6|LGALS9;nc|ENSG00000170298|Q3B8N2-2|LGALS9B;ENSG00000168961|ENST00000395473|LGALS9;ENSG00000171916|ENST00000328114|LGALS9C;ENSG00000170298|ENST00000423676|LGALS9B	nc|ENSG00000168961|O00182-3|LGALS9	nc|ENSG00000168961|O00182-3|LGALS9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	593.2210571169853	2	593.791012	1185.56747	2.4987	0.0014837	-0.35186	-0.00020893	2.1468	0.0012748	593.7910827219249	77.69	0.3139	78.971	78.823	79.137	1.2809					14	9	2	0	0	0	0.1245	1	32596	32596		10.824	0	1	1176400			41400	4062	20221	20305	47722	47722					-0.01788983755159279
VWIYDPVHF	9	Unmodified	_VWIYDPVHF_					0	0	0		ENST00000481435.5_1_3:169693473-169703658:+|nuORF;ENSG00000008952|ENST00000337002|SEC62	ENST00000481435.5_1_3:169693473-169703658:+|nuORF	ENST00000481435.5_1_3:169693473-169703658:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	588.2988159060478	2	588.297842	1174.58113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.831	1	71.669	71.169	72.169	1.8378								0	0	0	0.081484	1	29298	29298		38.151	25.911	1				41401	536	20222	20306	47723	47723					0.0008233333992393455
VWLEEELKTF	10	Unmodified	_VWLEEELKTF_					0	0	0		ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2	ENSG00000033050|ENST00000287844|ABCF2	ENSG00000033050|ENST00000287844|ABCF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	647.3423339724541	2	647.339904	1292.66525	1.7714	0.0011467	0.96764	0.00062639	2.739	0.0017731	647.3400567096005	68.73	0.38007	70.096	69.904	70.284	1.3657					28	11	3	0	0	0	0.064585	1	28841	28841		114.19	85.105	1	1995200			41402	639	20223	20307	47724	47724					0.03062819646152093
VWLEEELKTF	10	Unmodified	_VWLEEELKTF_					0	0	0		ENSG00000033050|ENST00000287844|ABCF2;nc|ENSG00000285292|Q9UG63-2|ABCF2	ENSG00000033050|ENST00000287844|ABCF2	ENSG00000033050|ENST00000287844|ABCF2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	647.3420898318291	2	647.339904	1292.66525	2.2467	0.0014544	0.038323	2.4808E-05	2.285	0.0014792	647.3395336454105	68.124	0.37306	69.994	69.796	70.169	1.87					24	11	3	0	0	0	0.058871	1	28593	28593		93.166	64.671	1	2060200			41403	639	20223	20307	47725	47725					0.03062819646152093
VWLKLLIPK	9	Unmodified	_VWLKLLIPK_					0	0	0		ENSG00000276950|ENST00000621179|GSTT4	ENSG00000276950|ENST00000621179|GSTT4	ENSG00000276950|ENST00000621179|GSTT4	MSMS	GG20161007_CRH_Patient100_A02_02	2	555.3762084841728	2	555.375895	1108.73724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.12	1	104.18	103.68	104.68	0.059502								0	0	0	0.42693	1	43847	43847		0.6015	0.14316	1				41404	5469	20224	20308	47726	47726					0.18721823581222452
VWLKLLIPK	9	Unmodified	_VWLKLLIPK_					0	0	0		ENSG00000276950|ENST00000621179|GSTT4	ENSG00000276950|ENST00000621179|GSTT4	ENSG00000276950|ENST00000621179|GSTT4	MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3761474490166	2	555.375895	1108.73724	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.06	1	104.22	103.72	104.72	0.16055								0	0	0	0.42693	1	44011	44011		0.52476	0.066424	1				41405	5469	20224	20308	47727	47727					0.18721823581222452
VWLKQLRQNKE	11	Unmodified	_VWLKQLRQNKE_					0	0	0			REV__nc|ENSG00000144320|Q9C0E8-2|LNPK	REV__nc|ENSG00000144320|Q9C0E8-2|LNPK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2824279665947	3	481.280654	1440.82013	2.796	0.0013456	2.4618	0.0011848	5.2577	0.0025304	481.281430264167	85.774	0.52925	85.774	85.603	86.132	0					22	16	2	0	0	0	1.0388	1	35750	35750		0.50596	0	1	996180	+		41406	10242	20225	20309	47728	47728					0.11735488571252972
VWLKQLRQNKE	11	Unmodified	_VWLKQLRQNKE_					0	0	0			REV__nc|ENSG00000144320|Q9C0E8-2|LNPK	REV__nc|ENSG00000144320|Q9C0E8-2|LNPK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	481.280654	1440.82013	2.796	0.0013456	2.4618	0.0011848	5.2577	0.0025304	481.281430264167	85.774	0.52925	85.774	85.603	86.132	0	-0.13925	-0.0015769	NaN	0.50596	22	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	996180	+		41407	10242	20225	20309							0.11735488571252972
VWLLLIFH	8	Unmodified	_VWLLLIFH_					0	0	0		nc|ENSG00000290203|Q96PH1-5|NOX5;ENST00000527315.5_1_15:69323805-69349033:+|nuORF;nc|ENSG00000290203|Q96PH1-4|NOX5;nc|ENSG00000290203|Q96PH1-6|NOX5;nc|ENSG00000290203|Q96PH1-3|NOX5;nc|ENSG00000290203|Q96PH1-2|NOX5;ENSG00000255346|ENST00000388866|NOX5	nc|ENSG00000290203|Q96PH1-5|NOX5	nc|ENSG00000290203|Q96PH1-5|NOX5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	347.2188903689384	3	347.547901	1039.62187	1.3787	0.00047918	1.1716	0.0004072	2.5504	0.00088637	347.5487552246067	43.964	0.64604	44.288	43.866	44.512	0.32389					41	20	3	0	0	0	2.3239	1	18436	18436		1.8442	0	1	2507700			41408	5402	20226	20310	47729	47729					0.10364719450240045
VWLLPRASF	9	Unmodified	_VWLLPRASF_					0	0	0		ENST00000494593.1_1_11:67351648-67351816:+|nuORF	ENST00000494593.1_1_11:67351648-67351816:+|nuORF	ENST00000494593.1_1_11:67351648-67351816:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3202392458916	2	544.816202	1087.61785	1.4953	0.00081465	2.7728	0.0015107	4.2681	0.0023253	545.3176531865614	68.729	1.0797	70.582	70.056	71.136	1.853					44	34	2	0	0	0	0.66839	1	28789	28789		8.5933	2.8329	1	2821900			41409	6937	20227	20311	47730	47730					0.07754629956502868
VWLVAPLI	8	Unmodified	_VWLVAPLI_					0	0	0		nc|ENSG00000184634|Q93074-3|MED12;ENSG00000184634|ENST00000374080|MED12;nc|ENSG00000184634|Q93074-2|MED12;MED12|p.K1768Qfs*3|1|0.17|ENSG00000184634|chrX:71136550-71136551|-/C|frameshift_variant;nc|ENSG00000144893|Q86YW9-4|MED12L;nc|ENSG00000144893|Q86YW9|MED12L;ENSG00000144893|ENST00000687756|MED12L	nc|ENSG00000184634|Q93074-3|MED12;nc|ENSG00000144893|Q86YW9-4|MED12L	nc|ENSG00000184634|Q93074-3|MED12	MSMS	GG20161007_CRH_Patient100_W632_02	4	455.7915222048759	2	455.791664	909.568775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.913	1	46.872	46.372	47.372	1.9596								0	0	0	1.0178	1	18820	18820		2.8892	0	1				41410	4700;3097	20228	20312	47731	47731					0.11037341667554301
VWMARSFHRT	10	Unmodified	_VWMARSFHRT_					0	0	0		ENST00000453174.7_2_10:81666360-81667538:+|nuORF;ENST00000399449.3_1_10:75487125-75488312:-|nuORF	ENST00000453174.7_2_10:81666360-81667538:+|nuORF	ENST00000453174.7_2_10:81666360-81667538:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8886596560478	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.019	1	56.34	55.84	56.84	0.32088								0	0	0	0.66227	1	23465	23465		0.62683	0.17231	1				41411	6337	20229	20313	47732	47732					0.011907902252232816
VWMRSPLSTF	10	Oxidation (M)	_VWM(Oxidation (M))RSPLSTF_		VWM(1)RSPLSTF		VWM(40)RSPLSTF	0	0	1		ENST00000559725.5_1_15:60656692-60682421:-|nuORF;ENST00000558985.5_1_15:60656692-60690187:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.3124877810478	2	620.313166	1238.61178	1.4073	0.00087298	-0.70963	-0.00044019	0.6977	0.00043279	620.31274622019	46.429	0.55914	47.804	47.46	48.019	1.3751					37	17	3	0	0	0	0.28421	1	19437	19437		40.239	18.702	1	1487000			41412	7318	20230	20314	47733	47733		111			0.0020174366268292943
VWMRSPLSTF	10	Unmodified	_VWMRSPLSTF_					0	0	0		ENST00000559725.5_1_15:60656692-60682421:-|nuORF;ENST00000558985.5_1_15:60656692-60690187:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3180419802666	2	612.315709	1222.61686	2.3474	0.0014374	0.56585	0.00034648	2.9133	0.0017839	612.3161841540706	59.873	0.6736	61.293	60.862	61.536	1.4196					70	21	4	0	0	0	0.049207	4	25148	24994;25041;25093;25148		114.5	60.664	1	7243800			41413	7318	20230	20315	47734;47735;47736;47737	47737					0.014460475252917604
VWMRSPLSTF	10	Unmodified	_VWMRSPLSTF_					0	0	0		ENST00000559725.5_1_15:60656692-60682421:-|nuORF;ENST00000558985.5_1_15:60656692-60690187:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	ENST00000559725.5_1_15:60656692-60682421:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3171874880791	2	612.315709	1222.61686	2.5933	0.0015879	0.16816	0.00010297	2.7615	0.0016909	612.3160335286068	59.354	0.64182	61.323	60.908	61.55	1.969					60	20	4	0	0	0	0.064598	4	24884	24786;24838;24884;24941		114.5	70.09	1	8067100			41414	7318	20230	20315	47738;47739;47740;47741	47740					0.014460475252917604
VWPGLLAVTS	10	Unmodified	_VWPGLLAVTS_					0	0	0		ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	ENST00000542434.5_1_10:45941131-45941290:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	348.2019531130791	3	348.20257	1041.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.54	1	31.54	31.04	32.04	0								0	0	0	0.66254	1	13217	13217		0.15932	0	1				41415	7222	20231	20316	47742	47742					0.0667521748271156
VWPKKGTAVFW	11	Unmodified	_VWPKKGTAVFW_					0	0	0		ENST00000464310.2_1_10:74769532-74774020:-|nuORF;nc|ENSG00000122884|P13674-3|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1	ENST00000464310.2_1_10:74769532-74774020:-|nuORF	ENST00000464310.2_1_10:74769532-74774020:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	440.2493469119072	3	440.248403	1317.72338	2.1218	0.00093413	0.053873	2.3717E-05	2.1757	0.00095785	440.2485239596966	46.159	2.472	47.534	46.379	48.851	1.3751					172	77	3	0	0	0	0.95124	12	18981	18981;19101;19147;19203;19295;19343;19396;19446;19502;19591;19668;19790		5.4027	2.0587	1	1598700			41416	2172	20232	20317	47743;47744;47745;47746;47747;47748;47749;47750;47751;47752;47753;47754	47743					0.07722546082118242
VWPKKGTAVFW	11	Unmodified	_VWPKKGTAVFW_					0	0	0		ENST00000464310.2_1_10:74769532-74774020:-|nuORF;nc|ENSG00000122884|P13674-3|P4HA1;nc|ENSG00000122884|P13674-2|P4HA1;ENSG00000122884|ENST00000394890|P4HA1	ENST00000464310.2_1_10:74769532-74774020:-|nuORF	ENST00000464310.2_1_10:74769532-74774020:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	440.2498046755791	3	440.248403	1317.72338	1.734	0.0007634	0.56504	0.00024876	2.2991	0.0010122	440.24867947048455	45.563	2.8473	47.533	46.458	49.306	1.9703					165	90	2	0	0	0	0.95124	14	18689	18689;18766;18897;18962;19043;19094;19143;19194;19247;19312;19363;19418;19466;19646		5.4027	3.9476	1	1463900			41417	2172	20232	20317	47755;47756;47757;47758;47759;47760;47761;47762;47763;47764;47765;47766;47767;47768	47755					0.07722546082118242
VWRQFVKRF	9	Unmodified	_VWRQFVKRF_					0	0	0		ENST00000559938.1_1_15:50515185-50518319:+|nuORF;nc|ENSG00000140284|O14975-2|SLC27A2;ENSG00000140284|ENST00000267842|SLC27A2	ENST00000559938.1_1_15:50515185-50518319:+|nuORF	ENST00000559938.1_1_15:50515185-50518319:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	633.3685790896416	2	633.366924	1264.7193	2.0779	0.0013161	1.8224	0.0011542	3.9003	0.0024703	633.3675260009301	78.104	0.78809	78.104	77.841	78.629	0					44	24	3	0	0	0	0.85019	1	32565	32565		0.52476	0	1	947830			41418	2907	20233	20318	47769	47769					0.09752501379057321
VWSDVTPLTF	10	Unmodified	_VWSDVTPLTF_					0	0	0		chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11;ENST00000465385.5_1_22:24122222-24125728:+|nuORF;ENSG00000099953|ENST00000215743|MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.8012573122978	2	582.800414	1163.58628	2.3907	0.0013933	0.89225	0.00052	3.283	0.0019133	582.8010257173498	77.749	0.40743	79.03	78.76	79.167	1.2809					33	12	4	0	0	0	0.047799	2	32572	32572;32621		108	65.902	1	10721000			41419	254	20234	20319	47770;47771	47770					0.011025924118939656
VWSDVTPLTF	10	Unmodified	_VWSDVTPLTF_					0	0	0		chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11;ENST00000465385.5_1_22:24122222-24125728:+|nuORF;ENSG00000099953|ENST00000215743|MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1164.598925769329	1	1164.59355	1163.58628	2.0692	0.0024097	-0.59787	-0.00069628	1.4713	0.0017134	1164.593870891851	77.685	0.28462	78.966	78.823	79.108	1.2809					15	8	2	0	0	0	0.067945	1	32599	32599		108	68.047	1	1853900			41420	254	20234	20319	47772	47772					0.011025924118939656
VWSDVTPLTF	10	Unmodified	_VWSDVTPLTF_					0	0	0		chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11;ENST00000465385.5_1_22:24122222-24125728:+|nuORF;ENSG00000099953|ENST00000215743|MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.8017455935478	2	582.800414	1163.58628	1.3098	0.00076333	1.0425	0.00060756	2.3523	0.0013709	582.8007801539688	77.212	0.41466	78.964	78.753	79.167	1.7514					35	12	4	0	0	0	0.065879	2	32411	32359;32411		103.75	67.621	1	5383400			41421	254	20234	20319	47773;47774	47774					0.011025924118939656
VWSDVTPLTF	10	Unmodified	_VWSDVTPLTF_					0	0	0		chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11;ENST00000465385.5_1_22:24122222-24125728:+|nuORF;ENSG00000099953|ENST00000215743|MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	chr22:23779368-23780359|404|73.22|0.78|6.56|+|ENST00000437086|MMP11,MMP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1164.589526355267	1	1164.59355	1163.58628	0.94486	0.0011004	0.12681	0.00014768	1.0717	0.0012481	1164.5921510781743	77.273	0.31779	79.025	78.818	79.136	1.7514					15	9	2	0	0	0	0.092962	2	32376	32376;32426		65.235	37.606	1	1980300			41422	254	20234	20319	47775;47776	47775					0.011025924118939656
VWVLAKARPG	10	Unmodified	_VWVLAKARPG_					0	0	0		ENST00000531709.6_1_11:62566311-62566866:-|nuORF	ENST00000531709.6_1_11:62566311-62566866:-|nuORF	ENST00000531709.6_1_11:62566311-62566866:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	366.2279235720634	3	366.225709	1095.6553	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.413	1	54.734	54.234	55.234	0.32088								0	0	0	0.65923	1	22787	22787		5.7834	3.0482	1				41423	7171	20235	20320	47777	47777					0.1112972122211886
VWVLQIVL	8	Unmodified	_VWVLQIVL_					0	0	0			REV__nc|ENSG00000164506|Q5T5C0-3|STXBP5	REV__nc|ENSG00000164506|Q5T5C0-3|STXBP5	MSMS	GG20161007_CRH_Patient100_A02_01	1	485.2139465212822	2	485.310221	968.605889	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.02	1	105.02	104.52	105.52	0								0	0	0	1.0178	1	44479	44479		0.79363	0.19213	1		+		41424	10267	20236	20321	47778	47778					0.12033013213317645
VWVLRVSRTWL	11	Unmodified	_VWVLRVSRTWL_					0	0	0		nc|ENSG00000160224|O43918-3|AIRE	nc|ENSG00000160224|O43918-3|AIRE	nc|ENSG00000160224|O43918-3|AIRE	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	707.9243041872978	2	707.919521	1413.82449	2.5022	0.0017714	3.3511	0.0023723	5.8533	0.0041437	707.9215608420059	84.892	1.2969	85.153	84.501	85.797	0.26083					79	40	3	0	0	0	1.039	1	35575	35575		0.30703	0	1	1377500			41425	7902	20237	20322	47779	47779					0.13412997784848812
VWVRRPPLP	9	Unmodified	_VWVRRPPLP_					0	0	0			REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	REV__ENST00000372902.3_1_X:100603579-100603852:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	373.8967162966728	3	373.897704	1118.67128	0.21083	7.8828E-05	-1.9696	-0.00073644	-1.7588	-0.00065761	373.8966786807267	88.389	0.51817	88.389	88.15	88.668	0					52	16	4	0	0	0	0.84963	1	36987	36987		0.26902	0.033176	1	15634000	+		41426	12686	20238	20323	47780	47780					0.11669427459014514
VWVWVCLRRRL	11	Unmodified	_VWVWVCLRRRL_					0	0	0		ENST00000478137.1_1_7:1199695-1199887:-|nuORF	ENST00000478137.1_1_7:1199695-1199887:-|nuORF	ENST00000478137.1_1_7:1199695-1199887:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.9614135622978	3	495.958969	1484.85508	4.4246	0.0021944	-0.5224	-0.00025909	3.9022	0.0019353	495.9586211902955	89.724	1.8971	91.128	90.201	92.098	1.4045					113	59	3	0	0	0	1.0393	1	37914	37914		0.094841	0.011491	1	2698900			41427	6797	20239	20324	47781	47781					0.1320445289820782
VWWGRRPKQ	9	Unmodified	_VWWGRRPKQ_					0	0	0			REV__tr|A0A553SJ28|A0A553SJ28_NIACI8-oxo-dGTPdiphosphataseOS=NialliacirculansOX=1397GN=CEQ21_15990PE=4SV=1	REV__tr|A0A553SJ28|A0A553SJ28_NIACI8-oxo-dGTPdiphosphataseOS=NialliacirculansOX=1397GN=CEQ21_15990PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2480041384697	4	303.924175	1211.66759	-2.5269	-0.000768	0.30198	9.178E-05	-2.225	-0.00067622	304.17533484624914	97.136	0.75285	97.136	96.724	97.477	0					44	24	2	0	0	0	0.11941	1	40572	40572		1.0715	0.3738	1	1367300	+		41428	14879	20240	20325	47782	47782					0.0702275768517211
VWYPGKPLKV	10	Unmodified	_VWYPGKPLKV_					0	0	0		ENSG00000118849|ENST00000237696|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2370483279228	3	396.237615	1185.69102	0.18085	7.1661E-05	0.58462	0.00023165	0.76548	0.00030331	396.2378628596948	37.463	0.34544	38.747	38.579	38.925	1.284					37	21	2	0	0	0	0.33708	1	15727	15727		37.075	29.785	1	5588600			41429	2048	20241	20326	47783	47783					0.10559758679096376
VWYPGKPLKV	10	Unmodified	_VWYPGKPLKV_					0	0	0		ENSG00000118849|ENST00000237696|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	ENSG00000118849|ENST00000237696|RARRES1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.5717346072197	3	396.237615	1185.69102	0.59529	0.00023588	-0.92129	-0.00036505	-0.326	-0.00012917	396.23716948629215	36.787	0.31921	38.605	38.477	38.796	1.8176					37	20	2	0	0	0	0.46469	3	15411	15411;15453;15496		29.437	17.262	1	4397500			41430	2048	20241	20326	47784;47785;47786	47784					0.10559758679096376
VYAALQRQLL	10	Unmodified	_VYAALQRQLL_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3539916872978	2	587.850773	1173.68699	2.5032	0.0014715	0.8679	0.0005102	3.3711	0.0019817	587.8513560471594	44.472	0.25671	45.837	45.674	45.931	1.3653					17	7	3	0	0	0	0.059378	1	18615	18615		74.929	36.955	1	1262800			41431	4478	20242	20327	47787	47787					0.10709669185393977
VYAALQRQLL	10	Unmodified	_VYAALQRQLL_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8511230349541	2	587.850773	1173.68699	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.574	1	45.939	45.439	46.439	1.3653								0	0	0	0.49467	1	18683	18683		25.399	11.493	1				41432	4478	20242	20327	47788	47788					0.10709669185393977
VYAALQRQLL	10	Unmodified	_VYAALQRQLL_					0	0	0		nc|ENSG00000178209|Q15149-7|PLEC;nc|ENSG00000178209|Q15149-8|PLEC;nc|ENSG00000178209|Q15149-9|PLEC;nc|ENSG00000178209|Q15149-5|PLEC;ENSG00000178209|ENST00000345136|PLEC;nc|ENSG00000178209|Q15149-6|PLEC;nc|ENSG00000178209|Q15149-3|PLEC;nc|ENSG00000178209|Q15149-2|PLEC;nc|ENSG00000178209|Q15149|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	nc|ENSG00000178209|Q15149-7|PLEC	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.8527099490166	2	587.850773	1173.68699	2.1703	0.0012758	0.89174	0.00052421	3.062	0.0018	587.8514716964418	43.839	0.25481	45.783	45.607	45.862	1.9438					11	7	2	0	0	0	0.12991	2	18364	18364;18409		58.679	34.658	1	1338400			41433	4478	20242	20327	47789;47790	47789					0.10709669185393977
VYADQPHIF	9	Unmodified	_VYADQPHIF_					0	0	0		ENSG00000100439|ENST00000428304|ABHD4	ENSG00000100439|ENST00000428304|ABHD4	ENSG00000100439|ENST00000428304|ABHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2723876833916	2	545.271824	1088.5291	0.75381	0.00041103	0.33048	0.0001802	1.0843	0.00059123	545.2719535983779	37.642	0.26602	38.926	38.815	39.081	1.284					11	8	2	0	0	0	0.30098	1	15815	15815		25.399	7.253	1	787450			41434	1279	20243	20328	47791	47791					-0.011628300738266262
VYADQPHIF	9	Unmodified	_VYADQPHIF_					0	0	0		ENSG00000100439|ENST00000428304|ABHD4	ENSG00000100439|ENST00000428304|ABHD4	ENSG00000100439|ENST00000428304|ABHD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2725097537041	2	545.271824	1088.5291	0.75342	0.00041082	0.51479	0.0002807	1.2682	0.00069152	545.272343209967	37.031	0.24507	38.849	38.725	38.97	1.8176					16	10	2	0	0	0	0.53525	1	15542	15542		13.906	3.1065	1	663950			41435	1279	20243	20328	47792	47792					-0.011628300738266262
VYAEVSRLLL	10	Unmodified	_VYAEVSRLLL_					0	0	0		ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	582.3115112185478	2	581.845156	1161.67576	2.8977	0.001686	1.3785	0.00080206	4.2762	0.0024881	581.846148926277	59.81	0.27512	61.779	61.612	61.887	1.969					13	8	2	0	0	0	0.1236	1	25083	25083		28.495	17.671	1	1103100			41436	1894	20244	20329	47793	47793					0.10138847091275238
VYAFNLDTF	9	Unmodified	_VYAFNLDTF_					0	0	0		ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4;ENSG00000104731|ENST00000270583|KLHDC4	ENST00000562913.5_1_16:87744798-87760508:-|nuORF	ENST00000562913.5_1_16:87744798-87760508:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1089.527392566204	1	1089.52514	1088.51786	2.1894	0.0023854	-0.33265	-0.00036243	1.8567	0.0020229	1089.523947525611	76.064	0.30049	77.357	77.218	77.519	1.2938					15	9	2	0	0	0	0.1735	1	31952	31952		36.044	10.645	1	1643200			41437	1472	20245	20330	47794	47794					-0.02285652167961416
VYAFNLDTF	9	Unmodified	_VYAFNLDTF_					0	0	0		ENST00000562913.5_1_16:87744798-87760508:-|nuORF;ENST00000566349.5_1_16:87741959-87776602:-|nuORF;nc|ENSG00000104731|Q8TBB5-2|KLHDC4;nc|ENSG00000104731|Q8TBB5-3|KLHDC4;ENSG00000104731|ENST00000270583|KLHDC4	ENST00000562913.5_1_16:87744798-87760508:-|nuORF	ENST00000562913.5_1_16:87744798-87760508:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1089.52514	1088.51786	2.9291	0.0031913	1.5043	0.001639	4.4334	0.0048302	1089.526197293841	75.645	0.38604	77.427	77.166	77.552	1.7817	0.034604	0.0010789	NaN	36.044	21	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1144600			41438	1472	20245	20330							-0.02285652167961416
VYAFSIENF	9	Unmodified	_VYAFSIENF_					0	0	0		ENST00000528557.5_1_1:26759436-26769365:+|nuORF;nc|ENSG00000117682|Q86SQ9-3|DHDDS;nc|ENSG00000117682|Q86SQ9-4|DHDDS;ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS	ENST00000528557.5_1_1:26759436-26769365:+|nuORF	ENST00000528557.5_1_1:26759436-26769365:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1089.531542956829	1	1089.52514	1088.51786	2.8206	0.0030731	0.68911	0.00075081	3.5097	0.0038239	1089.5261114598213	74.848	0.28094	76.154	75.967	76.247	1.3063					15	8	2	0	0	0	0.12174	1	31392	31392		42.095	13.013	1	1892300			41439	2020	20246	20331	47795	47795					-0.02285652167961416
VYAFSIENF	9	Unmodified	_VYAFSIENF_					0	0	0		ENST00000528557.5_1_1:26759436-26769365:+|nuORF;nc|ENSG00000117682|Q86SQ9-3|DHDDS;nc|ENSG00000117682|Q86SQ9-4|DHDDS;ENSG00000117682|ENST00000236342|DHDDS;nc|ENSG00000117682|Q86SQ9-2|DHDDS	ENST00000528557.5_1_1:26759436-26769365:+|nuORF	ENST00000528557.5_1_1:26759436-26769365:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2673828005791	2	545.266207	1088.51786	2.929	0.0015971	1.7549	0.0009569	4.6839	0.002554	545.2663026920799	74.365	0.59873	76.161	75.929	76.527	1.7962					49	18	5	0	0	0	0.09539	3	31201	31154;31201;31239		50.855	27.707	1	6658900			41440	2020	20246	20331	47796;47797;47798	47797					-0.02285652167961416
VYAPPVGGFSF	11	Unmodified	_VYAPPVGGFSF_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7;nc|ENSG00000136930|Q99436-2|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.7908203005791	2	570.78985	1139.56515	3.4516	0.0019701	0.0068862	3.9306E-06	3.4585	0.0019741	570.7893197677447	72.843	0.68534	74.172	73.852	74.537	1.3298					46	21	4	0	0	0	0.027491	1	30595	30595		85.357	51.254	1	6621800			41441	2750	20247	20332	47799	47799					0.0009462710304433131
VYAPPVGGFSF	11	Unmodified	_VYAPPVGGFSF_					0	0	0		ENSG00000136930|ENST00000259457|PSMB7;nc|ENSG00000136930|Q99436-2|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	ENSG00000136930|ENST00000259457|PSMB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.7910034060478	2	570.78985	1139.56515	2.7357	0.0015615	0.83333	0.00047565	3.5691	0.0020372	570.789413000165	72.379	0.62178	74.189	73.89	74.512	1.8101					46	19	5	0	0	0	0.061385	2	30369	30369;30415		64.236	37.353	1	4386200			41442	2750	20247	20332	47800;47801	47800					0.0009462710304433131
VYAQVARLF	9	Unmodified	_VYAQVARLF_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A;ENST00000394947.7_1_15:75702535-75702580:-|nuORF	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	533.8068115115166	2	533.805834	1065.59712	0.91449	0.00048816	1.2822	0.00068444	2.1967	0.0011726	533.8067948416024	51.626	0.28634	53.023	52.87	53.157	1.3966					23	9	3	0	0	0	0.019486	2	21632	21585;21632		100.37	45.598	1	14194000			41443	4086	20248	20333	47802;47803	47803					0.06694039576836985
VYAQVARLF	9	Unmodified	_VYAQVARLF_					0	0	0		ENSG00000169375|ENST00000394947|SIN3A;ENST00000394947.7_1_15:75702535-75702580:-|nuORF	ENSG00000169375|ENST00000394947|SIN3A	ENSG00000169375|ENST00000394947|SIN3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	533.8065673708916	2	533.805834	1065.59712	-0.077521	-4.1381E-05	0.67239	0.00035892	0.59487	0.00031754	533.8064497612786	50.981	0.37642	52.957	52.788	53.165	1.9753					30	13	3	0	0	0	0.026734	2	21393	21347;21393		92.822	35.351	1	10758000			41444	4086	20248	20333	47804;47805	47805					0.06694039576836985
VYAVIPAEKF	10	Unmodified	_VYAVIPAEKF_					0	0	0		ENST00000474020.5_1_1:47118240-47133739:-|nuORF;nc|ENSG00000123472|Q5TC12-2|ATPAF1;nc|ENSG00000123472|Q5TC12-3|ATPAF1;ENSG00000123472|ENST00000574428|ATPAF1	ENST00000474020.5_1_1:47118240-47133739:-|nuORF	ENST00000474020.5_1_1:47118240-47133739:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8229858279228	2	568.82115	1135.62775	2.316	0.0013174	0.96869	0.00055101	3.2847	0.0018684	568.8218416084064	47.713	0.69197	49.095	48.792	49.484	1.3825					55	21	4	0	0	0	0.06111	3	19963	19916;19963;20003		74.2	20.367	1	10509000			41445	2192	20249	20334	47806;47807;47808	47807					0.06535773171231085
VYAVIPAEKF	10	Unmodified	_VYAVIPAEKF_					0	0	0		ENST00000474020.5_1_1:47118240-47133739:-|nuORF;nc|ENSG00000123472|Q5TC12-2|ATPAF1;nc|ENSG00000123472|Q5TC12-3|ATPAF1;ENSG00000123472|ENST00000574428|ATPAF1	ENST00000474020.5_1_1:47118240-47133739:-|nuORF	ENST00000474020.5_1_1:47118240-47133739:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8225585818291	2	568.82115	1135.62775	2.5304	0.0014393	1.1256	0.00064024	3.656	0.0020796	568.8217561060671	47.227	0.68381	49.203	48.934	49.618	1.976					49	21	4	0	0	0	0.06111	3	19771	19722;19771;19821		74.2	20.367	1	10160000			41446	2192	20249	20334	47809;47810;47811	47810					0.06535773171231085
VYDEGEVLGEK	11	Unmodified	_VYDEGEVLGEK_					0	0	0			REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	REV__USP11|p.E403Gfs*17|1|0.07|ENSG00000102226|chrX:47241599-47241599|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	413.2037231326103	3	413.203076	1236.5874	-0.631	-0.00026073	4.0977	0.0016932	3.4667	0.0014325	413.2051459536378	13.372	0.46359	13.372	13.146	13.61	0					22	14	2	0	0	0	0.98765	1	5526	5526		2.084	0.34169	1	608100	+		41447	9064	20250	20335	47812	47812					-0.021432380098531212
VYDGKFAIF	9	Unmodified	_VYDGKFAIF_					0	0	0		nc|ENSG00000065361|P21860-4|ERBB3;ENSG00000065361|ENST00000267101|ERBB3;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-2|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF	nc|ENSG00000065361|P21860-4|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2792236208916	2	530.279118	1058.54368	0.67351	0.00035715	-0.31793	-0.00016859	0.35558	0.00018856	530.2789184678111	55.85	0.34633	57.26	57.066	57.412	1.4099					42	21	3	0	0	0	0.043696	2	23378	23378;23419		72.968	24.622	1	11651000			41448	786	20251	20336	47813;47814	47813					0.016752420743159746
VYDGKFAIF	9	Unmodified	_VYDGKFAIF_					0	0	0		nc|ENSG00000065361|P21860-4|ERBB3;ENSG00000065361|ENST00000267101|ERBB3;nc|ENSG00000065361|P21860-3|ERBB3;nc|ENSG00000065361|P21860-2|ERBB3;ENST00000546884.1_1_12:56474084-56480451:+|nuORF	nc|ENSG00000065361|P21860-4|ERBB3	nc|ENSG00000065361|P21860-4|ERBB3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2795898318291	2	530.279118	1058.54368	0.39879	0.00021147	0.54231	0.00028758	0.9411	0.00049904	530.2793373830283	55.335	0.28237	57.304	57.15	57.432	1.9684					27	17	2	0	0	0	0.03071	2	23224	23180;23224		86.332	34.063	1	14427000			41449	786	20251	20336	47815;47816	47816					0.016752420743159746
VYDNLGLEVL	10	Unmodified	_VYDNLGLEVL_					0	0	0		tr|A0A7D6ZFV8|A0A7D6ZFV8_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16645PE=4SV=1	tr|A0A7D6ZFV8|A0A7D6ZFV8_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16645PE=4SV=1	tr|A0A7D6ZFV8|A0A7D6ZFV8_9CLOTPatatin-likephospholipasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	567.2659789919853	2	567.805697	1133.59684	4.3313	0.0024593	-2.8494	-0.0016179	1.4818	0.00084139	568.3056925306978	90.527	0.15841	91.508	91.367	91.525	0.98157					5	4	2	0	0	0	0.12525	1	38137	38137		6.7232	1.4925	1	159910			41450	17065	20252	20337	47817	47817					0.035385750663408544
VYDPLFSQL	9	Unmodified	_VYDPLFSQL_					0	0	0		ENSG00000100104|ENST00000215917|SRRD	ENSG00000100104|ENST00000215917|SRRD	ENSG00000100104|ENST00000215917|SRRD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2838622927666	2	541.281857	1080.54916	3.0261	0.001638	1.2628	0.00068351	4.2889	0.0023215	541.2820848307196	74.993	0.46552	76.299	76.059	76.524	1.3063					44	14	4	0	0	0	0.019432	3	31462	31425;31462;31504		99.799	41.12	1	11348000			41451	1242	20253	20338	47818;47819;47820	47819					0.012109208661286175
VYDPLFSQL	9	Unmodified	_VYDPLFSQL_					0	0	0		ENSG00000100104|ENST00000215917|SRRD	ENSG00000100104|ENST00000215917|SRRD	ENSG00000100104|ENST00000215917|SRRD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2826415896416	2	541.281857	1080.54916	2.9497	0.0015966	0.50178	0.0002716	3.4515	0.0018682	541.2817596511129	74.535	0.47588	76.327	76.078	76.554	1.7923					44	14	4	0	0	0	0.0060384	3	31292	31214;31252;31292		118.07	49.988	1	7665500			41452	1242	20253	20338	47821;47822;47823	47823					0.012109208661286175
VYDPSLKTLL	10	Unmodified	_VYDPSLKTLL_					0	0	0		ENSG00000057935|ENST00000405094|MTA3;nc|ENSG00000057935|Q9BTC8-2|MTA3	ENSG00000057935|ENST00000405094|MTA3	ENSG00000057935|ENST00000405094|MTA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8361083865166	2	574.831714	1147.64888	1.6171	0.00092955	3.1749	0.001825	4.792	0.0027546	574.8337211281581	54.195	0.4805	55.599	55.291	55.771	1.4048					35	15	4	0	0	0	0.12602	2	22714	22664;22714		59.368	24.967	1	6625300			41453	731	20254	20339	47824;47825	47825					0.0809573848009677
VYDPSLKTLL	10	Unmodified	_VYDPSLKTLL_					0	0	0		ENSG00000057935|ENST00000405094|MTA3;nc|ENSG00000057935|Q9BTC8-2|MTA3	ENSG00000057935|ENST00000405094|MTA3	ENSG00000057935|ENST00000405094|MTA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8328735232353	2	574.831714	1147.64888	1.0268	0.00059021	2.8066	0.0016133	3.8334	0.0022035	574.833359032258	53.673	0.40134	55.642	55.414	55.815	1.9697					28	12	3	0	0	0	0.046747	2	22502	22502;22544		84.522	29.288	1	6732600			41454	731	20254	20339	47826;47827	47826					0.0809573848009677
VYDSEDSEIL	10	Unmodified	_VYDSEDSEIL_					0	0	0			REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	585.2676269412041	2	585.264059	1168.51356	2.6431	0.0015469	1.6523	0.00096702	4.2954	0.0025139	585.2655778922892	69.875	0.37633	71.229	71.052	71.429	1.3536					37	11	4	0	0	0	0.80568	1	29378	29378		11.64	4.3511	1	2727500	+		41455	10477	20255	20340	47828	47828					-0.06395206172192047
VYDSEDSEIL	10	Unmodified	_VYDSEDSEIL_					0	0	0			REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	585.2667724490166	2	585.264059	1168.51356	2.0115	0.0011773	2.0889	0.0012225	4.1004	0.0023998	585.265495255725	69.421	0.31549	71.274	71.072	71.387	1.853					31	9	4	0	0	0	0.48057	1	29152	29152		28.487	12.64	1	1995000	+		41456	10477	20255	20340	47829	47829					-0.06395206172192047
VYDSEDSEIL	10	Unmodified	_VYDSEDSEIL_					0	0	0			REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	585.264059	1168.51356	2.6431	0.0015469	1.6523	0.00096702	4.2954	0.0025139	585.2655778922892	69.875	0.37633	71.229	71.052	71.429	1.3536	-0.022375	-0.00020717	NaN	28.487	37	11	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2727500	+		41457	10477	20255	20340							-0.06395206172192047
VYDSEDSEIL	10	Unmodified	_VYDSEDSEIL_					0	0	0			REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	REV__TMPRSS15|p.E405Nfs*6|1|0.03|ENSG00000154646|chr21:18344020-18344020|T/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	585.264059	1168.51356	2.0115	0.0011773	2.0889	0.0012225	4.1004	0.0023998	585.265495255725	69.421	0.31549	71.274	71.072	71.387	1.853	0.022375	0.00030388	NaN	28.487	31	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1995000	+		41458	10477	20255	20340							-0.06395206172192047
VYDVVELKF	9	Unmodified	_VYDVVELKF_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3076660037041	2	556.305332	1110.59611	3.0529	0.0016983	0.26586	0.0001479	3.3187	0.0018462	556.3054867165406	61.191	0.51974	62.611	62.409	62.929	1.4196					50	16	4	0	0	0	0.081597	3	25650	25608;25650;25706		55.503	30.103	1	18730000			41459	3244	20256	20341	47830;47831;47832	47831					0.0452378041729844
VYDVVELKF	9	Unmodified	_VYDVVELKF_					0	0	0		ENSG00000149532|ENST00000439958|CPSF7;nc|ENSG00000149532|Q8N684|CPSF7;nc|ENSG00000149532|Q8N684-3|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	ENSG00000149532|ENST00000439958|CPSF7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.3067504763603	2	556.305332	1110.59611	3.1888	0.001774	-0.49169	-0.00027353	2.6971	0.0015004	556.305160701826	60.656	0.58589	62.621	62.387	62.973	1.9653					50	18	4	0	0	0	0.046715	3	25453	25405;25453;25496		70.332	44.064	1	13098000			41460	3244	20256	20341	47833;47834;47835	47834					0.0452378041729844
VYEENLHIFF	10	Unmodified	_VYEENLHIFF_					0	0	0		ENST00000373504.10_1_X:72900888-72901020:+|nuORF	ENST00000373504.10_1_X:72900888-72901020:+|nuORF	ENST00000373504.10_1_X:72900888-72901020:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	655.8267089724541	2	655.824421	1309.63429	1.8761	0.0012304	0.41696	0.00027345	2.293	0.0015038	655.8246334724488	68.033	0.31194	69.41	69.271	69.583	1.3778					22	9	3	0	0	0	0.19531	1	28546	28546		49.554	9.3151	1	1727800			41461	6162	20257	20342	47836	47836					-0.008143336680632274
VYEENLHIFF	10	Unmodified	_VYEENLHIFF_					0	0	0		ENST00000373504.10_1_X:72900888-72901020:+|nuORF	ENST00000373504.10_1_X:72900888-72901020:+|nuORF	ENST00000373504.10_1_X:72900888-72901020:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.8267089724541	2	655.824421	1309.63429	1.4499	0.00095087	0.85763	0.00056246	2.3075	0.0015133	655.8247955522155	67.477	0.31257	69.347	69.176	69.489	1.87					19	9	3	0	0	0	0.1784	1	28309	28309		51.63	18.185	1	1555800			41462	6162	20257	20342	47837	47837					-0.008143336680632274
VYEFVLYLK	9	Unmodified	_VYEFVLYLK_					0	0	0			REV__ENSG00000008086|ENST00000623535|CDKL5	REV__ENSG00000008086|ENST00000623535|CDKL5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2844726443291	3	391.889992	1172.64815	0.43042	0.00016868	-2.5762	-0.0010096	-2.1458	-0.00084092	392.22317034113183	25.317	0.88545	27.034	26.36	27.245	1.7167					45	28	2	0	0	0	0.11916	1	10424	10424		0.86438	0	1	596520	+		41463	8520	20258	20343	47838	47838					0.06872943831035627
VYEKRFRKL	9	Unmodified	_VYEKRFRKL_					0	0	0			REV__nc|ENSG00000100485|Q07890-2|SOS2	REV__nc|ENSG00000100485|Q07890-2|SOS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.5844299197197	3	413.583785	1237.72953	0.50057	0.00020703	0.37448	0.00015488	0.87505	0.00036191	413.58404870599884	23.244	1.4011	24.895	24.655	26.056	1.6511					105	45	3	0	0	0	0.71526	3	10025	10025;10093;10147		4.1895	0.60244	1	2735900	+		41464	8992	20259	20344	47839;47840;47841	47839					0.1201706431365892
VYELHVWLL	9	Unmodified	_VYELHVWLL_					0	0	0		ENSG00000188505|ENST00000339852|NCCRP1	ENSG00000188505|ENST00000339852|NCCRP1	ENSG00000188505|ENST00000339852|NCCRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3310424685478	2	586.329142	1170.64373	2.6373	0.0015463	0.10272	6.0229E-05	2.74	0.0016066	586.3290895568131	80.101	0.49824	81.352	81.109	81.608	1.2512					35	15	3	0	0	0	0.10993	1	33597	33597		46.021	22.873	1	3073000			41465	4866	20260	20345	47842	47842					0.06523479408133426
VYELHVWLL	9	Unmodified	_VYELHVWLL_					0	0	0		ENSG00000188505|ENST00000339852|NCCRP1	ENSG00000188505|ENST00000339852|NCCRP1	ENSG00000188505|ENST00000339852|NCCRP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3311645388603	2	586.329142	1170.64373	1.5523	0.00091013	0.37287	0.00021863	1.9251	0.0011288	586.3293366985951	79.537	0.52492	81.254	81.075	81.6	1.7167					34	16	3	0	0	0	0.10993	1	33326	33326		46.021	22.873	1	2914400			41466	4866	20260	20345	47843	47843					0.06523479408133426
VYENRDFI	8	Unmodified	_VYENRDFI_					0	0	0			REV__tr|A0A553SG39|A0A553SG39_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_10135PE=4SV=1	REV__tr|A0A553SG39|A0A553SG39_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_10135PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	527.8323242068291	2	528.261456	1054.50836	3.5937	0.0018984	0.018249	9.6404E-06	3.6119	0.001908	528.7628023774021	82.453	0.25747	83.665	83.505	83.763	1.2125					14	7	3	0	0	0	2.3239	1	34625	34625		10.183	0	1	436400	+		41467	14731	20261	20346	47844	47844					-0.016714204534764576
VYENVSHFL	9	Unmodified	_VYENVSHFL_					0	0	0		ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.2787353396416	2	554.277106	1106.53966	2.2805	0.001264	0.046137	2.5573E-05	2.3266	0.0012896	554.2771913172071	44.29	0.32189	45.654	45.48	45.802	1.364					25	9	3	0	0	0	0.073578	2	18587	18541;18587		58.679	26.373	1	3539600			41468	3804	20262	20347	47845;47846	47846					-0.009348474193984657
VYENVSHFL	9	Unmodified	_VYENVSHFL_					0	0	0		ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	ENSG00000164933|ENST00000297578|SLC25A32	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.2795898318291	2	554.277106	1106.53966	2.0426	0.0011322	-0.15119	-8.3803E-05	1.8914	0.0010484	554.2773257758494	43.643	0.30733	45.587	45.427	45.734	1.9438					22	9	3	0	0	0	0.057024	2	18284	18284;18339		65.235	31.133	1	2687700			41469	3804	20262	20347	47847;47848	47847					-0.009348474193984657
VYERELQTF	9	Unmodified	_VYERELQTF_					0	0	0		ENSG00000203791|ENST00000368836|EEF1AKMT2	ENSG00000203791|ENST00000368836|EEF1AKMT2	ENSG00000203791|ENST00000368836|EEF1AKMT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	593.1589843630791	2	592.800946	1183.58734	0.91434	0.00054202	0.44544	0.00026406	1.3598	0.00080608	593.3024780288619	31.386	0.16678	33.211	33.103	33.27	1.8246					7	5	2	0	0	0	0.11812	1	13170	13170		4.756	0.81161	1	433060			41470	5115	20263	20348	47849	47849					0.0028880678080440703
VYEYVVERF	9	Unmodified	_VYEYVVERF_					0	0	0		ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4	ENSG00000134744|ENST00000257177|TUT4	ENSG00000134744|ENST00000257177|TUT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.3095580935478	2	602.305864	1202.59717	2.0187	0.0012159	0.68896	0.00041496	2.7077	0.0016308	602.3068876876036	45.632	0.28179	47.007	46.864	47.146	1.3751					24	8	4	0	0	0	0.066197	2	19140	19085;19140		61.602	28.816	1	2991400			41471	2632	20264	20349	47850;47851	47851					0.003979947861580513
VYEYVVERF	9	Unmodified	_VYEYVVERF_					0	0	0		ENSG00000134744|ENST00000257177|TUT4;nc|ENSG00000134744|Q5TAX3|TUT4	ENSG00000134744|ENST00000257177|TUT4	ENSG00000134744|ENST00000257177|TUT4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.3093749880791	2	602.305864	1202.59717	1.7837	0.0010743	1.3871	0.00083546	3.1708	0.0019098	602.3067754929856	45.166	0.37371	47.126	46.896	47.269	1.9596					26	11	3	0	0	0	0.036104	2	18887	18887;18931		79.596	46.811	1	1725500			41472	2632	20264	20349	47852;47853	47852					0.003979947861580513
VYFEGSDFKF	10	Unmodified	_VYFEGSDFKF_					0	0	0		SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant;SHQ1|p.M321Ifs*35|1|0.06|ENSG00000144736|chr3:72812768-72812769|-/T|frameshift_variant;ENSG00000144736|ENST00000325599|SHQ1	SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant	SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	620.2951537966728	2	619.790047	1237.56554	2.2305	0.0013824	3.0922	0.0019165	5.3227	0.0032989	619.7899313781613	59.178	0.34597	61.147	60.94	61.286	1.969					16	10	2	0	0	0	0.12602	2	24820	24820;24875		59.368	30.287	1	3650100			41473	3091	20265	20350	47854;47855	47854					-0.043739979677638985
VYFEQIEYF	9	Unmodified	_VYFEQIEYF_					0	0	0			REV__ANKRD12|p.I2040F|1|0.05|ENSG00000101745|chr18:9281055-9281055|A/T|missense_variant	REV__ANKRD12|p.I2040F|1|0.05|ENSG00000101745|chr18:9281055-9281055|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.2935668826103	2	619.292422	1236.57029	1.383	0.00085649	0.99617	0.00061692	2.3792	0.0014734	619.2932985139184	84.308	0.27997	85.466	85.279	85.559	1.159					16	8	2	0	0	0	0.23535	1	35355	35355		29.082	3.6823	1	1733400	+		41474	8126	20266	20351	47856	47856					-0.038531138250164076
VYFEQIEYF	9	Unmodified	_VYFEQIEYF_					0	0	0			REV__ANKRD12|p.I2040F|1|0.05|ENSG00000101745|chr18:9281055-9281055|A/T|missense_variant	REV__ANKRD12|p.I2040F|1|0.05|ENSG00000101745|chr18:9281055-9281055|A/T|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	619.2950927615166	2	619.292422	1236.57029	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.786	1	85.424	84.924	85.924	1.6379								0	0	0	0.052667	1	35141	35141		43.858	11.553	1		+		41475	8126	20266	20351	47857	47857					-0.038531138250164076
VYFLSEPSF	9	Unmodified	_VYFLSEPSF_					0	0	0			REV__nc|ENSG00000140455|Q9Y6I4-2|USP3	REV__nc|ENSG00000140455|Q9Y6I4-2|USP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2686645388603	2	544.768583	1087.52261	2.8761	0.0015668	4.4609	0.0024302	7.337	0.0039969	544.7743842871917	74.926	0.85915	76.232	75.756	76.615	1.3063					78	27	5	0	0	0	0.44535	1	31448	31448		18.135	4.6271	1	11432000	+		41476	10124	20267	20352	47858	47858					-0.017647680251684505
VYFPDQHINF	10	Unmodified	_VYFPDQHINF_					0	0	0		nc|ENSG00000116117|Q8TEW8-5|PARD3B;nc|ENSG00000116117|Q8TEW8-6|PARD3B;nc|ENSG00000116117|Q8TEW8-3|PARD3B;nc|ENSG00000116117|Q8TEW8-2|PARD3B;ENSG00000116117|ENST00000406610|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.3101684451103	2	640.308938	1278.60332	1.3081	0.00083761	0.94456	0.00060481	2.2527	0.0014424	640.3095611473924	54.318	0.60524	55.723	55.485	56.09	1.4048					61	18	4	0	0	0	0.062288	5	22764	22679;22724;22764;22805;22845		106.94	77.859	1	20103000			41477	1950	20268	20353	47859;47860;47861;47862;47863	47861					-0.024834869822825567
VYFPDQHINF	10	Unmodified	_VYFPDQHINF_					0	0	0		nc|ENSG00000116117|Q8TEW8-5|PARD3B;nc|ENSG00000116117|Q8TEW8-6|PARD3B;nc|ENSG00000116117|Q8TEW8-3|PARD3B;nc|ENSG00000116117|Q8TEW8-2|PARD3B;ENSG00000116117|ENST00000406610|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	nc|ENSG00000116117|Q8TEW8-5|PARD3B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.3094970583916	2	640.308938	1278.60332	1.027	0.00065757	-0.15436	-9.8839E-05	0.8726	0.00055874	640.3088211429703	53.889	0.63031	55.858	55.563	56.193	1.9697					62	19	4	0	0	0	0.048317	5	22498	22498;22541;22579;22618;22663		118.07	81.941	1	18726000			41478	1950	20268	20353	47864;47865;47866;47867;47868	47864					-0.024834869822825567
VYFVSFFLF	9	Unmodified	_VYFVSFFLF_					0	0	0			REV__OR4F6|p.P253Lfs*13|1|0.17|ENSG00000184140|chr15:101806476-101806483|CCATTAAT/-|frameshift_variant	REV__OR4F6|p.P253Lfs*13|1|0.17|ENSG00000184140|chr15:101806476-101806483|CCATTAAT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	584.3583862185478	2	584.807511	1167.60047	3.3297	0.0019473	-2.709	-0.0015842	0.62077	0.00036303	584.8060361670376	74.299	0.29875	75.617	75.469	75.768	1.318					15	9	2	0	0	0	0.10306	1	31195	31195		19.439	0	1	802330	+		41479	11412	20269	20354	47869	47869					0.023372896308501367
VYGAEWSWL	9	Unmodified	_VYGAEWSWL_					0	0	0		DPH7|p.D339E|1|0.45|ENSG00000148399|chr9:137555581-137555581|G/C|missense_variant	DPH7|p.D339E|1|0.45|ENSG00000148399|chr9:137555581-137555581|G/C|missense_variant	DPH7|p.D339E|1|0.45|ENSG00000148399|chr9:137555581-137555581|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.7667724490166	2	555.766374	1109.5182	2.7907	0.001551	-0.9611	-0.00053414	1.8296	0.0010168	555.7661593824978	74.624	0.47143	76.405	76.228	76.699	1.7817					25	14	2	0	0	0	0.44535	1	31324	31324		18.135	1.1927	1	1264500			41480	427	20270	20355	47870	47870					-0.032182324481027536
VYGFLRNGF	9	Unmodified	_VYGFLRNGF_					0	0	0		ENST00000343327.6_1_9:115030452-115095785:-|nuORF	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.7819091677666	2	536.782359	1071.55016	0.9789	0.00052546	-1.3934	-0.00074793	-0.41445	-0.00022247	536.7817048682758	51.631	0.74612	53.027	52.745	53.492	1.3966					69	25	4	0	0	0	0.006164	6	21606	21540;21558;21606;21655;21703;21763		117.6	73.192	1	105550000			41481	5948	20271	20356	47871;47872;47873;47874;47875;47876	47873					0.017251800257099603
VYGFLRNGF	9	Unmodified	_VYGFLRNGF_					0	0	0		ENST00000343327.6_1_9:115030452-115095785:-|nuORF	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	ENST00000343327.6_1_9:115030452-115095785:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.7811157107353	2	536.782359	1071.55016	-0.095547	-5.1288E-05	-1.1433	-0.0006137	-1.2388	-0.00066499	536.7817834098632	51.045	0.64069	53.02	52.727	53.367	1.9753					69	24	4	0	0	0	0.0037165	5	21364	21309;21317;21364;21414;21460		125.62	81.218	1	83249000			41482	5948	20271	20356	47877;47878;47879;47880;47881	47879					0.017251800257099603
VYGFPVNQL	9	Unmodified	_VYGFPVNQL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1036.549365222454	1	1036.54621	1035.53893	2.414	0.0025022	0.58496	0.00060634	2.9989	0.0031085	1036.547236955438	65.067	0.50217	66.466	66.255	66.757	1.3989					35	15	3	0	0	0	0.046276	1	27310	27310		70.716	32.742	1	1788900			41483	3064	20272	20357	47882	47882					0.022583579315551106
VYGFPVNQL	9	Unmodified	_VYGFPVNQL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.7767822146416	2	518.776742	1035.53893	3.2276	0.0016744	-2.4966	-0.0012952	0.73097	0.00037921	518.7756177842248	65.058	0.37778	66.457	66.316	66.694	1.3989					25	11	3	0	0	0	0.098957	1	27349	27349		49.669	36.161	1	2132800			41484	3064	20272	20357	47883	47883					0.022583579315551106
VYGFPVNQL	9	Unmodified	_VYGFPVNQL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1036.548266589642	1	1036.54621	1035.53893	2.871	0.0029759	-1.2264	-0.0012712	1.6446	0.0017047	1036.5461599980417	64.57	0.53981	66.498	66.294	66.834	1.928					32	16	3	0	0	0	0.033521	2	27111	27061;27111		81.864	51.639	1	1581500			41485	3064	20272	20357	47884;47885	47885					0.022583579315551106
VYGFPVNQL	9	Unmodified	_VYGFPVNQL_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.2060424685478	2	518.776742	1035.53893	2.0545	0.0010658	-1.1435	-0.0005932	0.91099	0.0004726	518.7760309008992	64.702	0.47775	66.63	66.356	66.834	1.928					31	14	3	0	0	0	0.11333	1	27200	27200		13.508	8.2772	1	1766800			41486	3064	20272	20357	47886	47886					0.022583579315551106
VYGFVREAL	9	Unmodified	_VYGFVREAL_					0	0	0		nc|ENSG00000167671|Q9BZV1-2|UBXN6;ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4446018-4446171:-|nuORF	nc|ENSG00000167671|Q9BZV1-2|UBXN6	nc|ENSG00000167671|Q9BZV1-2|UBXN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.2898437380791	2	527.290017	1052.56548	2.1893	0.0011544	-0.33196	-0.00017504	1.8574	0.00097937	527.2901248352565	43.919	0.49845	45.273	45.132	45.63	1.3536					33	15	3	0	0	0	0.20244	2	18407	18407;18458		32.786	11.039	1	2971200			41487	3984	20273	20358	47887;47888	47887					0.04130046822888289
VYGFVREAL	9	Unmodified	_VYGFVREAL_					0	0	0		nc|ENSG00000167671|Q9BZV1-2|UBXN6;ENSG00000167671|ENST00000301281|UBXN6;ENST00000588238.1_1_19:4446018-4446171:-|nuORF	nc|ENSG00000167671|Q9BZV1-2|UBXN6	nc|ENSG00000167671|Q9BZV1-2|UBXN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.2918578982353	2	527.290017	1052.56548	2.1149	0.0011151	-0.34723	-0.00018309	1.7676	0.00093205	527.2898007007163	43.267	0.32603	45.211	45.072	45.398	1.9438					25	10	3	0	0	0	0.20244	2	18132	18132;18183		32.786	7.7947	1	3370700			41488	3984	20273	20358	47889;47890	47889					0.04130046822888289
VYGNERFIQYL	11	Unmodified	_VYGNERFIQYL_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;ENST00000528411.1_1_11:85734561-85780352:-|nuORF	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	701.3629638552666	2	701.361702	1400.70885	0.94733	0.00066442	-0.005908	-4.1436E-06	0.94143	0.00066028	701.3617479622526	56.662	0.30638	58.077	57.877	58.183	1.4145					22	9	3	0	0	0	0.026793	2	23730	23730;23784		89.609	61.114	1	3553500			41489	906	20274	20359	47891;47892	47891					0.024524291433408507
VYGNERFIQYL	11	Unmodified	_VYGNERFIQYL_					0	0	0		nc|ENSG00000073921|Q13492-4|PICALM;nc|ENSG00000073921|Q13492-3|PICALM;nc|ENSG00000073921|Q13492-2|PICALM;nc|ENSG00000073921|Q13492-5|PICALM;ENSG00000073921|ENST00000393346|PICALM;ENST00000528411.1_1_11:85734561-85780352:-|nuORF	nc|ENSG00000073921|Q13492-4|PICALM	nc|ENSG00000073921|Q13492-4|PICALM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	701.3634521365166	2	701.361702	1400.70885	0.48613	0.00034096	0.47708	0.0003346	0.96321	0.00067556	701.3620061229906	56.104	0.30876	58.073	57.901	58.21	1.9684					24	9	3	0	0	0	0.026551	2	23498	23498;23543		91.085	59.816	1	3418500			41490	906	20274	20359	47893;47894	47893					0.024524291433408507
VYGPLPQSF	9	Unmodified	_VYGPLPQSF_					0	0	0		ENST00000568339.5_1_16:85840315-85840477:+|nuORF;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENSG00000131143|ENST00000253452|COX4I1	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1007.517016589642	1	1007.51966	1006.51238	0.32824	0.00033071	0.83169	0.00083794	1.1599	0.0011687	1007.5197153941031	56.211	0.34726	57.621	57.464	57.811	1.4099					24	12	3	0	0	0	0.0049178	3	23526	23526;23568;23612		122.18	57.943	1	8641100			41491	2480	20275	20360	47895;47896;47897	47895					0.009386690402379827
VYGPLPQSF	9	Unmodified	_VYGPLPQSF_					0	0	0		ENST00000568339.5_1_16:85840315-85840477:+|nuORF;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENSG00000131143|ENST00000253452|COX4I1	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.2639648318291	2	504.263468	1006.51238	0.43726	0.0002205	-0.25461	-0.00012839	0.18265	9.2105E-05	504.26343469404765	56.211	0.33719	57.621	57.505	57.842	1.4099					17	11	2	0	0	0	0.03795	1	23533	23533		77.984	34.212	1	7450000			41492	2480	20275	20360	47898	47898					0.009386690402379827
VYGPLPQSF	9	Unmodified	_VYGPLPQSF_					0	0	0		ENST00000568339.5_1_16:85840315-85840477:+|nuORF;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENSG00000131143|ENST00000253452|COX4I1	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1007.522326648235	1	1007.51966	1006.51238	0.8493	0.00085568	-0.43483	-0.0004381	0.41446	0.00041758	1007.5187717360882	55.711	0.29775	57.679	57.543	57.841	1.9684					18	11	2	0	0	0	0.0060384	2	23339	23339;23389		118.07	41.244	1	9555200			41493	2480	20275	20360	47899;47900	47899					0.009386690402379827
VYGPLPQSF	9	Unmodified	_VYGPLPQSF_					0	0	0		ENST00000568339.5_1_16:85840315-85840477:+|nuORF;ENST00000562929.1_1_16:85838708-85840477:+|nuORF;ENST00000564648.1_1_16:85839106-85840477:+|nuORF;ENSG00000131143|ENST00000253452|COX4I1	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	ENST00000568339.5_1_16:85840315-85840477:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	504.2629272341728	2	504.263468	1006.51238	0.52757	0.00026603	2.7473	0.0013854	3.2749	0.0016514	504.26540282782565	55.685	0.26775	57.653	57.543	57.811	1.9684					19	10	2	0	0	0	0.051699	1	23356	23356		67.344	26.895	1	11176000			41494	2480	20275	20360	47901	47901					0.009386690402379827
VYHGREKVV	9	Unmodified	_VYHGREKVV_					0	0	0			REV__ENST00000575892.1_1_16:31176981-31177245:+|nuORF	REV__ENST00000575892.1_1_16:31176981-31177245:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	543.3046752810478	2	543.806365	1085.59818	1.7453	0.00094912	4.3443	0.0023625	6.0896	0.0033116	543.807572004258	48.475	0.36444	48.805	48.643	49.007	0.33034					16	11	2	0	0	0	0.11463	1	20369	20369		12.532	3.9383	1	504820	+		41495	13982	20276	20361	47902	47902					0.05880253945747427
VYHILKVLF	9	Unmodified	_VYHILKVLF_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MSMS	GG20161007_CRH_Patient100_W632_01	3	377.9025451540947	3	377.902344	1130.6852	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.434	1	59.852	59.352	60.352	1.4181								0	0	0	0.089791	1	24500	24500		36.506	17.785	1				41496	847	20277	20362	47903	47903					0.1250866016746386
VYHILKVLF	9	Unmodified	_VYHILKVLF_					0	0	0		ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	ENSG00000070061|ENST00000374647|ELP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.9006835818291	3	377.902344	1130.6852	0.74151	0.00028022	-1.332	-0.00050337	-0.5905	-0.00022315	377.9017905296575	58.029	0.64438	59.998	59.842	60.487	1.969					27	20	2	0	0	0	0.3091	1	24330	24330		24.991	18.361	1	1665500			41497	847	20277	20362	47904	47904					0.1250866016746386
VYHIWFPL	8	Unmodified	_VYHIWFPL_					0	0	0			REV__nc|ENSG00000183625|P51677-2|CCR3	REV__nc|ENSG00000183625|P51677-2|CCR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7968627810478	2	537.792195	1073.56984	1.8166	0.00097695	3.248	0.0017467	5.0646	0.0027237	537.7944891090241	42.124	0.43239	44.045	43.857	44.29	1.9211					27	13	3	0	0	0	0.67839	1	17679	17679		32.454	7.0543	1	2144900	+		41498	11400	20278	20363	47905	47905					0.03599556036442664
VYIAPLKAL	9	Unmodified	_VYIAPLKAL_					0	0	0		ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	ENSG00000112249|ENST00000369162|ASCC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3166381716728	2	494.315503	986.616454	1.1143	0.00055083	1.0085	0.0004985	2.1228	0.0010493	494.315901584315	52.653	0.16173	54.625	54.512	54.674	1.9722					6	4	2	0	0	0	0.34572	1	22069	22069		23.148	8.5667	1	578790			41499	1775	20279	20364	47906	47906					0.12260995867757174
VYIAVAGVGV	10	Unmodified	_VYIAVAGVGV_					0	0	0			REV__tr|A0A553SGG7|A0A553SGG7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10845PE=3SV=1	REV__tr|A0A553SGG7|A0A553SGG7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10845PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	947.5588867068291	1	947.556044	946.548768	1.8084	0.0017136	0.054213	5.137E-05	1.8626	0.001765	947.556715499296	64.844	0.31836	64.844	64.69	65.008	0					16	9	2	0	0	0	0.19438	2	27042	26993;27042		49.669	8.3316	1	1344400	+		41500	14746	20280	20365	47907;47908	47908					0.07335545936962262
VYIAVAGVGV	10	Unmodified	_VYIAVAGVGV_					0	0	0			REV__tr|A0A553SGG7|A0A553SGG7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10845PE=3SV=1	REV__tr|A0A553SGG7|A0A553SGG7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10845PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	947.5569946169853	1	947.556044	946.548768	1.9445	0.0018425	-0.91007	-0.00086234	1.0344	0.00098015	947.5554037477159	64.389	0.3559	64.718	64.593	64.949	0.32899					17	10	2	0	0	0	0.28071	2	26960	26960;27017		40.449	2.2974	1	1219000	+		41501	14746	20280	20365	47909;47910	47909					0.07335545936962262
VYIDIDPLL	9	Unmodified	_VYIDIDPLL_					0	0	0		ENST00000541310.5_1_12:22631189-22697084:-|nuORF;nc|ENSG00000111731|Q86YS7|C2CD5;nc|ENSG00000111731|Q86YS7-2|C2CD5;ENSG00000111731|ENST00000446597|C2CD5;nc|ENSG00000111731|Q86YS7-4|C2CD5;nc|ENSG00000111731|Q86YS7-5|C2CD5	ENST00000541310.5_1_12:22631189-22697084:-|nuORF	ENST00000541310.5_1_12:22631189-22697084:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3011962771416	2	530.799883	1059.58521	0.95595	0.00050742	2.0003	0.0010618	2.9563	0.0015692	531.301196514685	53.112	0.42979	55.081	54.927	55.357	1.9697					33	20	2	0	0	0	0.15478	1	22232	22232		38.151	3.9638	1	6123200			41502	1754	20281	20366	47911	47911					0.0578037804300493
VYIDQTMVL	9	Unmodified	_VYIDQTMVL_					0	0	0		nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-4|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2853881716728	2	541.283543	1080.55253	2.865	0.0015508	-0.0041641	-2.254E-06	2.8608	0.0015485	541.2836644736335	63.168	0.40926	64.582	64.376	64.785	1.4134					41	12	4	0	0	0	0.049839	3	26508	26462;26508;26551		68.081	23.674	1	8591100			41503	1875	20282	20367	47912;47913;47914	47913					0.015478476485213832
VYIDQTMVL	9	Unmodified	_VYIDQTMVL_					0	0	0		nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-4|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.2850219607353	2	541.283543	1080.55253	2.7255	0.0014752	0.59959	0.00032455	3.325	0.0017998	541.2838404652026	62.664	0.46842	64.609	64.345	64.814	1.9444					42	14	4	0	0	0	0.049839	2	26313	26268;26313		68.081	23.674	1	10140000			41504	1875	20282	20367	47915;47916	47916					0.015478476485213832
VYIDQTMVL	9	Unmodified	_VYIDQTMVL_					0	0	0		nc|ENSG00000114650|Q12770-3|SCAP;nc|ENSG00000114650|Q12770-2|SCAP;ENSG00000114650|ENST00000265565|SCAP;nc|ENSG00000114650|Q12770-4|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	nc|ENSG00000114650|Q12770-3|SCAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1081.560961902142	1	1081.55981	1080.55253	2.9248	0.0031634	-0.70589	-0.00076347	2.2189	0.0023999	1081.560142424591	62.694	0.31292	64.638	64.469	64.782	1.9444					22	9	3	0	0	0	0.19075	1	26295	26295		34.102	7.2188	1	1137500			41505	1875	20282	20367	47917	47917					0.015478476485213832
VYIDRVRSL	9	Unmodified	_VYIDRVRSL_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2202941775322	3	374.220624	1119.64004	0.31654	0.00011846	0.4763	0.00017824	0.79284	0.0002967	374.22053689931425	26.366	0.3116	27.637	27.498	27.809	1.2715					19	9	3	0	0	0	0.67213	1	11048	11048		8.4443	2.2525	1	1274600			41506	3576	20283	20368	47918	47918					0.08500809634278994
VYIDRVRSL	9	Unmodified	_VYIDRVRSL_					0	0	0		nc|ENSG00000160789|P02545-3|LMNA;ENSG00000160789|ENST00000368300|LMNA;nc|ENSG00000160789|P02545-2|LMNA;nc|ENSG00000160789|P02545-6|LMNA	nc|ENSG00000160789|P02545-3|LMNA	nc|ENSG00000160789|P02545-3|LMNA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	374.220624	1119.64004	0.35173	0.00013163	-0.52163	-0.0001952	-0.1699	-6.3578E-05	374.22066258460075	25.93	0.23899	27.646	27.523	27.762	1.7167	0.0045971	-0.00062444	NaN	8.4443	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618410			41507	3576	20283	20368							0.08500809634278994
VYIEYNFGL	9	Unmodified	_VYIEYNFGL_					0	0	0			REV__nc|ENSG00000152208|O43424-2|GRID2	REV__nc|ENSG00000152208|O43424-2|GRID2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2822753787041	2	559.281857	1116.54916	1.129	0.00063143	-0.3543	-0.00019816	0.77469	0.00043327	559.2817029465676	56.227	0.092907	58.195	58.117	58.21	1.9684					4	2	2	0	0	0	0.076627	1	23571	23571		57.471	2.6978	1	12479000	+		41508	10414	20284	20369	47919	47919					-0.004450791338513227
VYIHPSSALF	10	Unmodified	_VYIHPSSALF_					0	0	0		ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3036987185478	2	567.303124	1132.5917	1.4916	0.00084621	1.7558	0.00099606	3.2474	0.0018423	567.3033944597801	48.463	0.58733	49.851	49.552	50.14	1.388					43	18	4	0	0	0	0.25611	1	20319	20319		42.095	15.211	1	3470600			41509	824	20285	20370	47920	47920					0.030703159943413993
VYIHPSSALF	10	Unmodified	_VYIHPSSALF_					0	0	0		ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3041259646416	2	567.303124	1132.5917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.993	1	49.97	49.47	50.47	1.9772								0	0	0	0.010243	1	20101	20101		57.471	21.427	1				41510	824	20285	20370	47921	47921					0.030703159943413993
VYIKDLSSF	9	Unmodified	_VYIKDLSSF_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C;KIF3C|p.S409Tfs*16|1|0.02|ENSG00000084731|chr2:25980692-25980693|-/ATTG|frameshift_variant	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.8611938357353	2	536.289682	1070.56481	2.4342	0.0013054	2.3141	0.001241	4.7483	0.0025464	536.2901734628225	47.297	0.28814	48.68	48.504	48.792	1.3825					19	8	4	0	0	0	0.089748	1	19792	19792		29.082	5.061	1	1575900			41511	1055	20286	20371	47922	47922					0.03235207383158922
VYIKDLSSF	9	Unmodified	_VYIKDLSSF_					0	0	0		ENSG00000084731|ENST00000264712|KIF3C;KIF3C|p.S409Tfs*16|1|0.02|ENSG00000084731|chr2:25980692-25980693|-/ATTG|frameshift_variant	ENSG00000084731|ENST00000264712|KIF3C	ENSG00000084731|ENST00000264712|KIF3C	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	536.8610107302666	2	536.289682	1070.56481	2.2751	0.0012201	0.97642	0.00052365	3.2515	0.0017438	536.2886669141191	46.873	0.31362	48.849	48.685	48.999	1.976					19	9	3	0	0	0	0.095205	1	19598	19598		25.399	4.9457	1	990420			41512	1055	20286	20371	47923	47923					0.03235207383158922
VYIKHPVSL	9	Unmodified	_VYIKHPVSL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	352.5467407107353	3	352.546449	1054.61752	0.12081	4.2591E-05	0.80444	0.0002836	0.92525	0.0003262	352.5467441032863	24.182	0.55796	25.423	25.175	25.732	1.241					47	17	4	0	0	0	0.04812	3	10096	10050;10096;10139		55.235	23.197	1	6788900			41513	1209	20287	20372	47924;47925;47926	47925					0.09239210236660256
VYIKHPVSL	9	Unmodified	_VYIKHPVSL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.3178588747978	2	528.316035	1054.61752	1.376	0.00072695	0.86425	0.00045659	2.2402	0.0011835	528.3165563784981	24.175	0.34144	25.416	25.206	25.547	1.241					22	10	3	0	0	0	0.043696	1	10076	10076		72.968	36.924	1	927480			41514	1209	20287	20372	47927	47927					0.09239210236660256
VYIKHPVSL	9	Unmodified	_VYIKHPVSL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	352.5465576052666	3	352.546449	1054.61752	0.13397	4.723E-05	0.11924	4.2036E-05	0.25321	8.9267E-05	352.5465054714559	23.731	0.54333	25.382	25.146	25.689	1.6511					51	17	4	0	0	0	0.073578	4	9895	9855;9895;9942;9987		53.404	28.757	1	4681100			41515	1209	20287	20372	47928;47929;47930;47931	47929					0.09239210236660256
VYIKHPVSL	9	Unmodified	_VYIKHPVSL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.3158447146416	2	528.316035	1054.61752	0.69901	0.0003693	0.96843	0.00051164	1.6674	0.00088094	528.3165737089887	23.743	0.42035	25.395	25.177	25.597	1.6511					29	13	3	0	0	0	0.043696	2	9879	9879;9935		72.968	51.221	1	1341700			41516	1209	20287	20372	47932;47933	47932					0.09239210236660256
VYILQPEVI	9	Unmodified	_VYILQPEVI_					0	0	0		nc|ENSG00000197603|Q9H799-5|CPLANE1;nc|ENSG00000197603|Q9H799|CPLANE1;ENSG00000197603|ENST00000651892|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3166992068291	2	537.3157	1072.61685	2.2449	0.0012062	0.20684	0.00011114	2.4518	0.0013174	537.3154703921801	70.219	0.50911	72.057	71.751	72.26	1.8378					30	15	3	0	0	0	0.09539	1	29490	29490		50.855	20.63	1	4673000			41517	5017	20288	20373	47934	47934					0.08344370796953626
VYILYGILWLT	11	Unmodified	_VYILYGILWLT_					0	0	0		nc|ENSG00000153214|Q96K49-2|TMEM87B;ENSG00000153214|ENST00000283206|TMEM87B	nc|ENSG00000153214|Q96K49-2|TMEM87B	nc|ENSG00000153214|Q96K49-2|TMEM87B	MSMS	GG20161007_CRH_Patient100_W632_02	4	677.3960449099541	2	677.394482	1352.77441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.84	1	85.477	84.977	85.977	1.6379								0	0	0	0.63775	1	35164	35164		3.2813	0	1				41518	3351	20289	20374	47935	47935					0.1121345033632224
VYINEVRVI	9	Unmodified	_VYINEVRVI_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8241454958916	2	552.824224	1103.63389	2.2241	0.0012296	0.37433	0.00020694	2.5985	0.0014365	552.8243138064081	45.235	0.26071	46.601	46.464	46.725	1.3653					13	7	2	0	0	0	0.11669	1	18942	18942		43.772	19.752	1	1122000			41519	3807	20290	20375	47936	47936					0.08622291402753035
VYINEVRVI	9	Unmodified	_VYINEVRVI_					0	0	0		nc|ENSG00000164944|Q69YN4-3|VIRMA;ENSG00000164944|ENST00000297591|VIRMA;nc|ENSG00000164944|Q69YN4-4|VIRMA;nc|ENSG00000164944|Q69YN4-2|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	nc|ENSG00000164944|Q69YN4-3|VIRMA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8256103396416	2	552.824224	1103.63389	1.9018	0.0010514	-0.74166	-0.00041001	1.1602	0.00064137	552.8237941817632	44.676	0.31815	46.636	46.513	46.831	1.9596					15	9	2	0	0	0	0.40005	1	18741	18741		20.415	7.3721	1	642770			41520	3807	20290	20375	47937	47937					0.08622291402753035
VYIQEMFRF	9	Unmodified	_VYIQEMFRF_					0	0	0		nc|ENSG00000138613|Q8WW43-2|APH1B;ENSG00000138613|ENST00000261879|APH1B	nc|ENSG00000138613|Q8WW43-2|APH1B	nc|ENSG00000138613|Q8WW43-2|APH1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8119384646416	2	616.810259	1231.60597	2.8201	0.0017395	0.22126	0.00013647	3.0414	0.0018759	616.8104495452017	70.692	0.47392	72.046	71.84	72.314	1.3536					40	14	4	0	0	0	0.023685	2	29667	29625;29667		96.367	57.752	1	7177600			41521	2838	20291	20376	47938;47939	47939					-0.0005735484899105359
VYIQEMFRF	9	Unmodified	_VYIQEMFRF_					0	0	0		nc|ENSG00000138613|Q8WW43-2|APH1B;ENSG00000138613|ENST00000261879|APH1B	nc|ENSG00000138613|Q8WW43-2|APH1B	nc|ENSG00000138613|Q8WW43-2|APH1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8114501833916	2	616.810259	1231.60597	2.0031	0.0012356	-0.15407	-9.5034E-05	1.8491	0.0011405	616.8102703070675	70.156	0.44433	71.994	71.784	72.228	1.8378					38	13	3	0	0	0	0.0033884	3	29432	29383;29432;29473		126.57	68.844	1	5442300			41522	2838	20291	20376	47940;47941;47942	47941					-0.0005735484899105359
VYIRGSKIRF	10	Unmodified	_VYIRGSKIRF_					0	0	0		nc|ENSG00000286070|P62318-2|SNRPD3;ENSG00000100028|ENST00000215829|SNRPD3	nc|ENSG00000286070|P62318-2|SNRPD3	nc|ENSG00000286070|P62318-2|SNRPD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.5841857790947	3	413.583785	1237.72953	1.1419	0.00047226	-0.31653	-0.00013091	0.82534	0.00034135	413.58377032058286	23.748	1.3442	24.989	24.684	26.028	1.241					115	43	4	0	0	0	0.52861	7	10059	9904;9956;10009;10059;10127;10177;10247		22.775	13.231	1	2267800			41523	1228	20292	20377	47943;47944;47945;47946;47947;47948;47949	47946					0.12017064313636183
VYIRGSKIRF	10	Unmodified	_VYIRGSKIRF_					0	0	0		nc|ENSG00000286070|P62318-2|SNRPD3;ENSG00000100028|ENST00000215829|SNRPD3	nc|ENSG00000286070|P62318-2|SNRPD3	nc|ENSG00000286070|P62318-2|SNRPD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	413.5844909548759	3	413.583785	1237.72953	0.50057	0.00020703	0.37448	0.00015488	0.87505	0.00036191	413.58404870599884	23.244	1.4011	24.895	24.655	26.056	1.6511					105	45	3	0	0	0	0.34658	7	9704	9659;9704;9759;9826;9877;9923;9978		25.997	11.592	1	2735900			41524	1228	20292	20377	47950;47951;47952;47953;47954;47955;47956	47951					0.12017064313636183
VYISEHEHF	9	Unmodified	_VYISEHEHF_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	387.5174133181572	3	387.517218	1159.52982	0.43322	0.00016788	-0.43578	-0.00016887	-0.0025596	-9.9188E-07	387.5172216120038	22.088	0.45805	23.265	23.081	23.539	1.177					47	14	5	0	0	0	0.076627	2	9254	9202;9254		45.7	38.091	1	11196000			41525	1481	20293	20378	47957;47958	47958					-0.043560354247802024
VYISEHEHF	9	Unmodified	_VYISEHEHF_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	580.7729980349541	2	580.772188	1159.52982	1.0042	0.00058323	0.7948	0.0004616	1.799	0.0010448	580.7724293291168	22.117	0.3045	23.294	23.14	23.444	1.177					14	9	2	0	0	0	0.10294	1	9241	9241		48.346	29.089	1	1008400			41526	1481	20293	20378	47959	47959					-0.043560354247802024
VYISEHEHF	9	Unmodified	_VYISEHEHF_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.5170776247978	3	387.517218	1159.52982	0.26666	0.00010333	-1.8744	-0.00072637	-1.6078	-0.00062304	387.5166799626841	21.719	0.43786	23.335	23.142	23.579	1.6158					36	14	4	0	0	0	0.051699	2	9040	9040;9088		51.63	41.315	1	9764200			41527	1481	20293	20378	47960;47961	47960					-0.043560354247802024
VYISEHEHF	9	Unmodified	_VYISEHEHF_					0	0	0		nc|ENSG00000104853|O96005-4|CLPTM1;ENSG00000104853|ENST00000337392|CLPTM1;nc|ENSG00000104853|O96005-3|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	nc|ENSG00000104853|O96005-4|CLPTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.7714111208916	2	580.772188	1159.52982	0.4378	0.00025426	-1.9641	-0.0011407	-1.5263	-0.00088644	580.7711191736316	21.721	0.28405	23.336	23.171	23.455	1.6158					14	9	2	0	0	0	0.03795	1	9054	9054		77.984	58.727	1	1686300			41528	1481	20293	20378	47962	47962					-0.043560354247802024
VYITGKEVFSF	11	Unmodified	_VYITGKEVFSF_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	645.3439208865166	2	645.342446	1288.67034	2.1543	0.0013903	-0.59155	-0.00038175	1.5628	0.0010085	645.3422081693989	60.073	0.41914	61.493	61.236	61.656	1.4196					31	13	3	0	0	0	0.027424	1	25204	25204		85.764	40.025	1	4311500			41529	5034	20294	20379	47963	47963					0.03755123508813085
VYITGKEVFSF	11	Unmodified	_VYITGKEVFSF_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A;VPS13A-SLC44A1|2|fusion;VPS13A-SLC44A1|1|fusion	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	645.3430663943291	2	645.342446	1288.67034	2.6984	0.0017414	-1.7721	-0.0011436	0.92625	0.00059775	645.3410182945731	59.563	0.38819	61.532	61.315	61.703	1.969					26	12	3	0	0	0	0.0070342	2	24977	24977;25060		108.26	54.858	1	4182500			41530	5034	20294	20379	47964;47965	47964					0.03755123508813085
VYKAFVMETF	10	Unmodified	_VYKAFVMETF_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3129760622978	2	617.812467	1233.61038	-0.004149	-2.5633E-06	-0.80596	-0.00049793	-0.81011	-0.0005005	617.8116239244677	56.171	0.31534	57.581	57.464	57.779	1.4099					19	11	2	0	0	0	0.1063	2	23538	23538;23588		82.529	59.793	1	4189200			41531	1534	20295	20380	47966;47967	47966					0.002921095739111479
VYKAFVMETF	10	Unmodified	_VYKAFVMETF_					0	0	0		nc|ENSG00000105677|Q9BVK8-2|TMEM147;ENST00000477168.6_1_19:36037622-36038346:+|nuORF;ENST00000593027.6_1_19:36036533-36038346:+|nuORF;ENSG00000105677|ENST00000222284|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	nc|ENSG00000105677|Q9BVK8-2|TMEM147	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	617.8125488162041	2	617.812467	1233.61038	0.35129	0.00021703	-1.261	-0.00077905	-0.90968	-0.00056201	617.8115005327962	55.622	0.311	57.59	57.469	57.78	1.9684					22	13	2	0	0	0	0.20739	1	23345	23345		55.503	35.049	1	4392500			41532	1534	20295	20380	47968	47968					0.002921095739111479
VYKDLLVLF	9	Unmodified	_VYKDLLVLF_					0	0	0		FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant;ENSG00000037637|ENST00000375592|FBXO42	FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant	FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3369628787041	2	555.333893	1108.65323	2.395	0.00133	0.91275	0.00050688	3.3078	0.0018369	555.3345668618413	77.855	0.30906	79.136	78.95	79.259	1.2809					16	9	2	0	0	0	0.35391	1	32678	32678		22.736	2.2827	1	1825700			41533	652	20296	20381	47969	47969					0.10325247693640449
VYKDLLVLF	9	Unmodified	_VYKDLLVLF_					0	0	0		FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant;ENSG00000037637|ENST00000375592|FBXO42	FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant	FBXO42|p.W313Vfs*31|1|0.04|ENSG00000037637|chr1:16252389-16252390|-/TTTCCACAATCAGACACAAAATGTTTTCTGAGAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3369018435478	2	555.333893	1108.65323	1.1801	0.00065532	2.8157	0.0015636	3.9957	0.002219	555.3356511730609	77.305	0.38188	79.057	78.849	79.231	1.7514					20	11	2	0	0	0	0.11669	1	32415	32415		43.772	3.8151	1	1711800			41534	652	20296	20381	47970	47970					0.10325247693640449
VYKGGLTDGI	10	Unmodified	_VYKGGLTDGI_					0	0	0		nc|ENSG00000144771|Q9HBL6-2|LRTM1;ENSG00000144771|ENST00000273286|LRTM1;TGFBR3-LRTM1|1|fusion;TGFBR3-LRTM1|2|fusion	nc|ENSG00000144771|Q9HBL6-2|LRTM1	nc|ENSG00000144771|Q9HBL6-2|LRTM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	511.7793456912041	2	511.779482	1021.54441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.279	1	49.255	48.755	49.755	1.976								0	0	0	0.65703	1	19800	19800		7.9102	0	1				41535	3094	20297	20382	47971	47971					0.03450036723359062
VYKKSIFVF	9	Unmodified	_VYKKSIFVF_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.5585815310478	3	377.558466	1129.65357	1.1925	0.00045022	-0.0014847	-5.6057E-07	1.191	0.00044966	377.5583326500389	41.901	0.67969	43.241	42.955	43.634	1.3399					61	21	4	0	0	0	0.099302	4	17570	17522;17570;17610;17650		49.554	33.405	1	16584000			41536	3824	20298	20383	47972;47973;47974;47975	47973					0.09392667413499112
VYKKSIFVF	9	Unmodified	_VYKKSIFVF_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.8351928591728	2	565.83406	1129.65357	2.0831	0.0011787	-0.091951	-5.2029E-05	1.9912	0.0011267	565.8339020259433	41.951	0.45785	43.291	43.05	43.508	1.3399					36	14	3	0	0	0	0.072635	3	17588	17537;17588;17642		72.968	42.743	1	4400000			41537	3824	20298	20383	47976;47977;47978	47977					0.09392667413499112
VYKKSIFVF	9	Unmodified	_VYKKSIFVF_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5587341189384	3	377.558466	1129.65357	1.6141	0.00060941	-1.3308	-0.00050245	0.28327	0.00010695	377.55781170261685	41.399	0.51765	43.292	43.024	43.541	1.8927					53	16	4	0	0	0	0.33297	3	17390	17289;17339;17390		23.79	8.5413	1	18611000			41538	3824	20298	20383	47979;47980;47981	47981					0.09392667413499112
VYKKSIFVF	9	Unmodified	_VYKKSIFVF_					0	0	0		nc|ENSG00000165264|O95139-2|NDUFB6;ENSG00000165264|ENST00000379847|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	nc|ENSG00000165264|O95139-2|NDUFB6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.8356811404228	2	565.83406	1129.65357	1.9125	0.0010821	-0.743	-0.00042041	1.1695	0.00066172	565.8335702342307	41.413	0.38843	43.306	43.088	43.476	1.8927					32	12	3	0	0	0	0.087985	3	17304	17304;17356;17406		63.961	42.424	1	4730900			41539	3824	20298	20383	47982;47983;47984	47982					0.09392667413499112
VYKRKFGLKG	10	Unmodified	_VYKRKFGLKG_					0	0	0			REV__tr|A0A553ST51|A0A553ST51_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_04195PE=4SV=1	REV__tr|A0A553ST51|A0A553ST51_NIACIDNAalkylationrepairproteinOS=NialliacirculansOX=1397GN=CEQ21_04195PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2485534548759	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.65	1	110.65	110.15	111.15	0								0	0	0	0.66254	1	47887	47887		0.15932	0	1		+		41540	15228	20299	20384	47985	47985					0.13413965801987615
VYKRWKLK	8	Unmodified	_VYKRWKLK_					0	0	0		ENST00000549913.6_1_12:113306162-113306792:+|nuORF	ENST00000549913.6_1_12:113306162-113306792:+|nuORF	ENST00000549913.6_1_12:113306162-113306792:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	374.2384826540947	3	374.237838	1119.69168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.033	1	26.75	26.25	27.25	1.7167								0	0	0	1.0178	1	10462	10462		0.45834	0.18932	1				41541	7255	20300	20385	47986	47986					0.13662598118821734
VYKTIMEQF	9	Unmodified	_VYKTIMEQF_					0	0	0		BAIAP2-RPTOR|2|fusion;BAIAP2-RPTOR|1|fusion;ENST00000575989.5_1_17:79009009-79027584:+|nuORF;ENST00000570913.5_1_17:79009009-79050117:+|nuORF;nc|ENSG00000175866|Q9UQB8-3|BAIAP2;nc|ENSG00000175866|Q9UQB8-5|BAIAP2;nc|ENSG00000175866|Q9UQB8-4|BAIAP2;nc|ENSG00000175866|Q9UQB8-6|BAIAP2;ENSG00000175866|ENST00000428708|BAIAP2;nc|ENSG00000175866|Q9UQB8|BAIAP2	BAIAP2-RPTOR|2|fusion	BAIAP2-RPTOR|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	579.7985717654228	2	579.796817	1157.57908	2.1518	0.0012476	0.64318	0.00037292	2.795	0.0016205	579.7970244308004	44.132	0.62856	45.486	45.163	45.792	1.3536					50	19	4	0	0	0	3.3098E-05	4	18518	18434;18481;18518;18560		160.69	71.289	1	17006000			41542	101	20301	20386	47987;47988;47989;47990	47989					0.006595365398197828
VYKTIMEQF	9	Unmodified	_VYKTIMEQF_					0	0	0		BAIAP2-RPTOR|2|fusion;BAIAP2-RPTOR|1|fusion;ENST00000575989.5_1_17:79009009-79027584:+|nuORF;ENST00000570913.5_1_17:79009009-79050117:+|nuORF;nc|ENSG00000175866|Q9UQB8-3|BAIAP2;nc|ENSG00000175866|Q9UQB8-5|BAIAP2;nc|ENSG00000175866|Q9UQB8-4|BAIAP2;nc|ENSG00000175866|Q9UQB8-6|BAIAP2;ENSG00000175866|ENST00000428708|BAIAP2;nc|ENSG00000175866|Q9UQB8|BAIAP2	BAIAP2-RPTOR|2|fusion	BAIAP2-RPTOR|2|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.7967407107353	2	579.796817	1157.57908	2.0292	0.0011765	-1.8062	-0.0010472	0.22297	0.00012928	579.7956644166742	43.466	0.69553	45.409	45.104	45.799	1.9438					55	22	4	0	0	0	0.00013275	3	18218	18171;18218;18269		145.13	69.369	1	14286000			41543	101	20301	20386	47991;47992;47993	47992					0.006595365398197828
VYKYDKTRIMT	11	Unmodified	_VYKYDKTRIMT_					0	0	0			REV__tr|A0A553SUP8|A0A553SUP8_NIACIDUF4976domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03890PE=4SV=1	REV__tr|A0A553SUP8|A0A553SUP8_NIACIDUF4976domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03890PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	709.2213012576103	2	709.379037	1416.74352	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.428	1	95.83	95.33	96.33	0.40208								0	0	0	0.63775	1	40151	40151		5.2969	0	1		+		41544	15301	20302	20387	47994	47994					0.05181928959746074
VYLAKLGNFF	10	Unmodified	_VYLAKLGNFF_					0	0	0		ENSG00000140575|ENST00000268182|IQGAP1;ENST00000559682.1_1_15:90969387-90972913:+|nuORF;ENST00000560418.1_2_15:90931626-90974461:+|nuORF	ENSG00000140575|ENST00000268182|IQGAP1	ENSG00000140575|ENST00000268182|IQGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.3268920779228	2	586.329142	1170.64373	1.8503	0.0010849	-2.8069	-0.0016458	-0.95664	-0.0005609	586.3270393886296	69.331	0.41054	71.184	70.977	71.387	1.853					34	12	4	0	0	0	0.04351	1	29086	29086		81.613	28.038	1	4285300			41545	2927	20303	20388	47995	47995					0.06523479408133426
VYLAPNFSF	9	Unmodified	_VYLAPNFSF_					0	0	0		ENSG00000179921|ENST00000519574|GPBAR1	ENSG00000179921|ENST00000519574|GPBAR1	ENSG00000179921|ENST00000519574|GPBAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.2712280154228	2	529.271293	1056.52803	0.92188	0.00048793	-3.3206	-0.0017575	-2.3987	-0.0012696	529.2693969292885	51.791	0.47721	53.187	52.95	53.428	1.3966					36	16	3	0	0	0	0.46905	1	21754	21754		16.942	3.8998	1	7446600			41546	4532	20304	20389	47996	47996					0.002029555572789832
VYLDEPIKI	9	Unmodified	_VYLDEPIKI_					0	0	0		nc|ENSG00000163681|Q14BN4-7|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP;ENSG00000163681|ENST00000671191|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3119994997978	2	545.313158	1088.61176	0.83071	0.000453	-3.0705	-0.0016744	-2.2398	-0.0012214	545.3110598635438	53.479	0.17009	54.879	54.778	54.948	1.4005					13	8	2	0	0	0	0.1388	1	22387	22387		39.95	10.868	1	3620000			41547	3713	20305	20390	47997	47997					0.07100066934322058
VYLDGIVRI	9	Unmodified	_VYLDGIVRI_					0	0	0		ENST00000563918.5_1_16:67210716-67213197:-|nuORF;nc|ENSG00000196123|Q68EN5-3|MATCAP1;ENST00000561679.5_1_16:67210716-67212831:-|nuORF;ENSG00000196123|ENST00000563902|MATCAP1	ENST00000563918.5_1_16:67210716-67213197:-|nuORF	ENST00000563918.5_1_16:67210716-67213197:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.3147460818291	2	524.313492	1046.61243	3.323	0.0017423	1.0183	0.0005339	4.3413	0.0022762	524.31399093262	60.814	0.3181	62.234	62.027	62.345	1.4196					17	9	2	0	0	0	0.01454	2	25522	25472;25522		103.75	53.815	1	8081400			41548	4915	20306	20391	47998;47999	47999					0.09098906374060789
VYLDGIVRI	9	Unmodified	_VYLDGIVRI_					0	0	0		ENST00000563918.5_1_16:67210716-67213197:-|nuORF;nc|ENSG00000196123|Q68EN5-3|MATCAP1;ENST00000561679.5_1_16:67210716-67212831:-|nuORF;ENSG00000196123|ENST00000563902|MATCAP1	ENST00000563918.5_1_16:67210716-67213197:-|nuORF	ENST00000563918.5_1_16:67210716-67213197:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	524.3157836794853	2	524.313492	1046.61243	3.2595	0.001709	0.36559	0.00019168	3.6251	0.0019007	524.3140099838195	60.275	0.28222	62.24	62.073	62.356	1.9653					23	8	4	0	0	0	0.01454	2	25310	25263;25310		103.75	48.975	1	8879900			41549	4915	20306	20391	48000;48001	48001					0.09098906374060789
VYLDHAGATLF	11	Unmodified	_VYLDHAGATLF_					0	0	0		ENSG00000075643|ENST00000261326|MOCOS	ENSG00000075643|ENST00000261326|MOCOS	ENSG00000075643|ENST00000261326|MOCOS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.8132812380791	2	603.811313	1205.60807	1.0168	0.00061394	0.75723	0.00045722	1.774	0.0010712	603.8118130630861	52.013	0.28921	53.41	53.265	53.554	1.3966					22	9	3	0	0	0	0.05109	2	21795	21750;21795		66.457	33.491	1	2497900			41550	938	20307	20392	48002;48003	48003					0.013493971604702892
VYLDHAGATLF	11	Unmodified	_VYLDHAGATLF_					0	0	0		ENSG00000075643|ENST00000261326|MOCOS	ENSG00000075643|ENST00000261326|MOCOS	ENSG00000075643|ENST00000261326|MOCOS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.8115722537041	2	603.811313	1205.60807	0.44235	0.0002671	0.38454	0.00023219	0.82689	0.00049929	603.811557152012	51.407	0.30772	53.382	53.249	53.556	1.9753					19	10	3	0	0	0	0.027955	2	21540	21540;21588		82.529	38.122	1	3000100			41551	938	20307	20392	48004;48005	48004					0.013493971604702892
VYLDKFIRL	9	Unmodified	_VYLDKFIRL_					0	0	0		ENST00000462279.5_1_5:60188520-60189039:-|nuORF;GNL3L|p.G499Vfs*4|1|0.04|ENSG00000130119|chrX:54558484-54558485|-/T|frameshift_variant;ENSG00000130119|ENST00000360845|GNL3L	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	389.5698730349541	3	389.569253	1165.68593	0.9725	0.00037886	0.087984	3.4276E-05	1.0605	0.00041313	389.56939376866933	56.723	1.0522	58.137	57.877	58.929	1.4145					104	35	4	0	0	0	0.039278	6	23761	23711;23761;23800;23839;23880;23921		76.825	41.893	1	148010000			41552	2416	20308	20393	48006;48007;48008;48009;48010;48011	48007					0.1097145481651296
VYLDKFIRL	9	Unmodified	_VYLDKFIRL_					0	0	0		ENST00000462279.5_1_5:60188520-60189039:-|nuORF;GNL3L|p.G499Vfs*4|1|0.04|ENSG00000130119|chrX:54558484-54558485|-/T|frameshift_variant;ENSG00000130119|ENST00000360845|GNL3L	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.8511230349541	2	583.850242	1165.68593	1.5748	0.00091945	-0.037175	-2.1705E-05	1.5376	0.00089774	583.8501672439677	56.721	0.69937	58.136	57.908	58.607	1.4145					59	22	4	0	0	0	0.0026866	4	23762	23715;23762;23814;23855		152.89	91.528	1	30003000			41553	2416	20308	20393	48012;48013;48014;48015	48013					0.1097145481651296
VYLDKFIRL	9	Unmodified	_VYLDKFIRL_					0	0	0		ENST00000462279.5_1_5:60188520-60189039:-|nuORF;GNL3L|p.G499Vfs*4|1|0.04|ENSG00000130119|chrX:54558484-54558485|-/T|frameshift_variant;ENSG00000130119|ENST00000360845|GNL3L	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.5695373415947	3	389.569253	1165.68593	0.94535	0.00036828	-0.15303	-5.9615E-05	0.79233	0.00030867	389.5693056577709	56.112	1.1533	58.08	57.811	58.964	1.9684					110	37	5	0	0	0	0.050451	6	23529	23479;23529;23568;23607;23650;23718		67.838	32.906	1	111230000			41554	2416	20308	20393	48016;48017;48018;48019;48020;48021	48017					0.1097145481651296
VYLDKFIRL	9	Unmodified	_VYLDKFIRL_					0	0	0		ENST00000462279.5_1_5:60188520-60189039:-|nuORF;GNL3L|p.G499Vfs*4|1|0.04|ENSG00000130119|chrX:54558484-54558485|-/T|frameshift_variant;ENSG00000130119|ENST00000360845|GNL3L	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	ENST00000462279.5_1_5:60188520-60189039:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8506347537041	2	583.850242	1165.68593	1.1011	0.0006429	0.21373	0.00012478	1.3149	0.00076768	583.8502952419777	56.106	0.67467	58.075	57.871	58.545	1.9684					60	21	4	0	0	0	0.027721	4	23531	23482;23531;23582;23628		110.67	55.901	1	21049000			41555	2416	20308	20393	48022;48023;48024;48025	48023					0.1097145481651296
VYLEKFMTF	9	Oxidation (M)	_VYLEKFM(Oxidation (M))TF_		VYLEKFM(1)TF		VYLEKFM(72)TF	0	0	1		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.2990600466728	2	597.299193	1192.58383	1.5671	0.00093602	-0.48975	-0.00029253	1.0773	0.00064349	597.2992969237748	50.746	0.2098	52.139	52.016	52.226	1.3938					15	6	3	0	0	0	0.044893	1	21246	21246		71.922	39.137	1	1050200			41556	1372	20309	20394	48026	48026		24			-0.004755793174126666
VYLEKFMTF	9	Unmodified	_VYLEKFMTF_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3015014529228	2	589.301736	1176.58892	1.8748	0.0011048	-1.7862	-0.0010526	0.088578	5.2199E-05	589.300589100929	67.302	0.43029	68.68	68.516	68.946	1.3784					40	13	4	0	0	0	0.0011269	2	28263	28216;28263		133.05	62.737	1	7981300			41557	1372	20309	20395	48027;48028	48028					0.007687245452189018
VYLEKFMTF	9	Unmodified	_VYLEKFMTF_					0	0	0		ENSG00000101972|ENST00000371145|STAG2;nc|ENSG00000101972|Q8N3U4|STAG2	ENSG00000101972|ENST00000371145|STAG2	ENSG00000101972|ENST00000371145|STAG2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3004028201103	2	589.301736	1176.58892	1.3964	0.00082289	-1.8809	-0.0011084	-0.48451	-0.00028552	589.3004035452138	66.844	0.42822	68.733	68.527	68.955	1.8889					40	13	4	0	0	0	0.00013275	2	28022	28022;28070		145.13	70.733	1	7205200			41558	1372	20309	20395	48029;48030	48029					0.007687245452189018
VYLGNPSATL	10	Unmodified	_VYLGNPSATL_					0	0	0			REV__ENSG00000065268|ENST00000585809|WDR18	REV__ENSG00000065268|ENST00000585809|WDR18	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	517.6248046755791	2	517.779482	1033.54441	1.9406	0.0010048	-0.64155	-0.00033218	1.299	0.00067262	517.7771017184093	48.165	0.53042	49.553	49.365	49.895	1.388					34	16	4	0	0	0	0.12412	1	20219	20219		20.454	0	1	3436500	+		41559	8672	20310	20396	48031	48031					0.028980367233771176
VYLIRRLL	8	Unmodified	_VYLIRRLL_					0	0	0			REV__AluJb_dup105930|chr17:16441567-16441818:-|1.204158333585596|0.4201583608019265|1.52|429.0|18|3|anti-sense	REV__AluJb_dup105930|chr17:16441567-16441818:-|1.204158333585596|0.4201583608019265|1.52|429.0|18|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	523.3480102419853	2	523.347669	1044.68079	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.84	1	101.84	101.34	102.34	0								0	0	0	1.0178	1	42651	42651		0.79363	0.79363	1		+		41560	8100	20311	20397	48032	48032					0.16023195744560326
VYLPNINKI	9	Unmodified	_VYLPNINKI_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.3220703005791	2	537.321317	1072.62808	2.5161	0.0013519	-1.6536	-0.00088853	0.86244	0.00046341	537.3208938949566	49.843	1.1576	51.234	50.58	51.737	1.3911					125	36	6	0	0	0	0.0045981	5	20884	20757;20807;20845;20884;20923		123.1	51.963	1	111900000			41561	883	20312	20398	48033;48034;48035;48036;48037	48036					0.09467192891088416
VYLPNINKI	9	Unmodified	_VYLPNINKI_					0	0	0		ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	ENSG00000072422|ENST00000337910|RHOBTB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.3221313357353	2	537.321317	1072.62808	1.9008	0.0010214	-0.25066	-0.00013469	1.6502	0.00088668	537.3213019669773	49.231	1.2747	51.208	50.576	51.851	1.9772					87	40	3	0	0	0	0.006164	5	20650	20513;20561;20611;20650;20689		117.6	39.614	1	119580000			41562	883	20312	20398	48038;48039;48040;48041;48042	48041					0.09467192891088416
VYLPPEAFTF	10	Unmodified	_VYLPPEAFTF_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	592.3069335818291	2	592.305332	1182.59611	3.7368	0.0022134	1.7941	0.0010626	5.5309	0.003276	592.3049393341668	82.418	0.88449	83.631	83.223	84.108	1.2125					59	27	4	0	0	0	0.051733	3	34571	34507;34571;34679		78.149	46.881	1	4491500			41563	2463	20313	20399	48043;48044;48045	48044					0.012117804172703472
VYLPPEAFTF	10	Unmodified	_VYLPPEAFTF_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	592.3069946169853	2	592.305332	1182.59611	3.8443	0.002277	0.66517	0.00039399	4.5095	0.002671	592.3045947285202	81.88	0.8169	83.55	83.201	84.017	1.67					57	25	3	0	0	0	0.068389	4	34322	34274;34322;34381;34468		71.134	42.647	1	2347900			41564	2463	20313	20399	48046;48047;48048;48049	48047					0.012117804172703472
VYLPRVLDI	9	Unmodified	_VYLPRVLDI_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3301269412041	2	544.329142	1086.64373	1.928	0.0010495	0.29369	0.00015986	2.2217	0.0012093	544.3293238884944	67.941	0.79601	69.319	68.695	69.491	1.3778					33	25	2	0	0	0	0.075994	1	28512	28512		57.722	19.748	1	1939300			41565	5084	20314	20400	48050	48050					0.10387479408132094
VYLPRVLDI	9	Unmodified	_VYLPRVLDI_					0	0	0		MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant;ENSG00000198793|ENST00000361445|MTOR	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MTOR|p.L2016Tfs*10|1|0.16|ENSG00000198793|chr1:11127794-11127795|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3300659060478	2	544.329142	1086.64373	1.3136	0.00071505	0.010355	5.6364E-06	1.324	0.00072068	544.3295597088701	67.413	0.70909	69.283	68.685	69.394	1.87					33	22	2	0	0	0	0.079895	2	28242	28242;28292		56.177	11.58	1	1718200			41566	5084	20314	20400	48051;48052	48051					0.10387479408132094
VYLPTHTSL	9	Unmodified	_VYLPTHTSL_					0	0	0		ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.7822753787041	2	515.782025	1029.5495	0.46596	0.00024033	0.51895	0.00026766	0.98491	0.000508	515.7822389728392	36.303	0.35828	37.58	37.359	37.717	1.2762					54	22	3	0	0	0	0.022807	3	15220	15180;15220;15256		97.075	42.301	1	9535200			41567	524	20315	20401	48053;48054;48055	48054					0.035903405860153725
VYLPTHTSL	9	Unmodified	_VYLPTHTSL_					0	0	0		ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	ENSG00000007944|ENST00000356840|MYLIP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.7818481326103	2	515.782025	1029.5495	1.0143	0.00052318	-0.51223	-0.0002642	0.50212	0.00025898	515.7817360513325	35.738	0.28961	37.555	37.402	37.692	1.8176					50	20	3	0	0	0	0.022807	3	14992	14952;14992;15033		97.075	43.882	1	9972300			41568	524	20315	20401	48056;48057;48058	48057					0.035903405860153725
VYLQNWSHVL	10	Unmodified	_VYLQNWSHVL_					0	0	0		ENSG00000169727|ENST00000578552|GPS1;nc|ENSG00000169727|Q13098|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1	ENSG00000169727|ENST00000578552|GPS1	ENSG00000169727|ENST00000578552|GPS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8326904177666	2	629.83258	1257.65061	2.2337	0.0014069	0.041479	2.6125E-05	2.2752	0.001433	629.8328037683696	59.334	0.33868	60.753	60.556	60.895	1.4196					25	10	3	0	0	0	0.050359	2	24850	24850;24902		78.728	48.092	1	3597900			41569	4108	20316	20402	48059;48060	48059					0.03208792288683071
VYLQNWSHVL	10	Unmodified	_VYLQNWSHVL_					0	0	0		ENSG00000169727|ENST00000578552|GPS1;nc|ENSG00000169727|Q13098|GPS1;nc|ENSG00000169727|Q13098-7|GPS1;ENST00000392357.1_1_17:80012338-80013241:+|nuORF;nc|ENSG00000169727|Q13098-6|GPS1	ENSG00000169727|ENST00000578552|GPS1	ENSG00000169727|ENST00000578552|GPS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.8354980349541	2	629.83258	1257.65061	1.8257	0.0011499	-0.23917	-0.00015064	1.5865	0.00099924	629.8324917121386	58.831	0.40011	60.8	60.604	61.004	1.969					29	12	3	0	0	0	0.065687	2	24667	24667;24717		103.35	71.048	1	2909600			41570	4108	20316	20402	48061;48062	48061					0.03208792288683071
VYLSILSLFI	10	Unmodified	_VYLSILSLFI_					0	0	0		SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant;SLC5A4|p.C517Ffs*46|1|0.16|ENSG00000100191|chr22:32224382-32224383|-/CATACATGCATACAATAAAAGGCAAAGA|frameshift_variant;ENSG00000100191|ENST00000266086|SLC5A4	SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant	SLC5A4|p.P348Mfs*18|1|0.33|ENSG00000100191|chr22:32231056-32231057|-/TGGATTGAATTAATGGAAGGTGCAAGAATTGCACCATA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3582031130791	2	584.354825	1166.6951	2.7115	0.0015845	2.1379	0.0012493	4.8494	0.0028338	584.3563008001049	73.616	1.4667	75.413	74.402	75.869	1.7962					117	46	3	0	0	0	0.80568	1	30935	30935		11.64	4.3511	1	4708700			41571	1250	20317	20403	48063	48063					0.1184180338218539
VYLSRRPSR	9	Unmodified	_VYLSRRPSR_					0	0	0		ENST00000480342.5_1_1:8525723-8716473:-|nuORF	ENST00000480342.5_1_1:8525723-8716473:-|nuORF	ENST00000480342.5_1_1:8525723-8716473:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3307983279228	2	567.330539	1132.64652	2.4475	0.0013885	-0.92071	-0.00052235	1.5268	0.00086619	567.3297076976346	74.695	2.0427	75.02	74.233	76.275	0.32463					203	64	5	0	0	0	0.84195	1	31307	31307		1.6526	0.45928	1	6803800			41572	6816	20318	20404	48064	48064					0.08550747585650242
VYLTCLLAYI	10	Unmodified	_VYLTCLLAYI_					0	0	0		tr|A0A553SFX1|A0A553SFX1_NIACIMetal-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_09665PE=4SV=1	tr|A0A553SFX1|A0A553SFX1_NIACIMetal-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_09665PE=4SV=1	tr|A0A553SFX1|A0A553SFX1_NIACIMetal-dependenthydrolaseOS=NialliacirculansOX=1397GN=CEQ21_09665PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3265258669853	2	586.325211	1170.63587	2.6266	0.00154	1.8418	0.0010799	4.4684	0.0026199	586.3261607679783	69.867	0.37592	71.22	70.99	71.366	1.3536					29	11	3	0	0	0	0.28892	1	29308	29308		39.957	3.9131	1	4520500			41573	16084	20319	20405	48065	48065					0.05737584096345927
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(110)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.7853271365166	2	648.783907	1295.55326	1.3027	0.00084519	0.4492	0.00029144	1.7519	0.0011366	648.7845425012838	50.607	1.3536	52	51.801	53.154	1.3938					120	44	5	0	0	0	0.0070725	7	21197	21148;21197;21235;21288;21358;21411;21467		114.2	88.802	1	31863000			41574	3062	20320	20406	48066;48067;48068;48069;48070;48071;48072	48067		54			-0.08269357702488378
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(40)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.7850829958916	2	648.783907	1295.55326	0.61155	0.00039676	-1.2189	-0.00079082	-0.60738	-0.00039406	648.7830822980392	52.632	0.56819	54.028	53.774	54.342	1.3966					27	17	3	0	0	0	0.13623	1	21982	21982		40.239	20.982	1	1868500			41575	3062	20320	20406	48073	48073		54			-0.08269357702488378
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(42)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	648.7848998904228	2	648.783907	1295.55326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.928	1	53.325	52.825	53.825	1.3966								0	0	0	0.062275	1	21742	21742		41.956	32.572	1				41576	3062	20320	20406	48074	48074		54			-0.08269357702488378
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(130)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.7853881716728	2	648.783907	1295.55326	1.4873	0.00096496	0.14566	9.4503E-05	1.633	0.0010595	648.7843382197201	50.077	1.1179	52.054	51.851	52.969	1.9772					113	36	5	0	0	0	0.0022704	7	21027	20929;20976;21027;21066;21123;21176;21246		129.77	104.37	1	30311000			41577	3062	20320	20406	48075;48076;48077;48078;48079;48080;48081	48077		54			-0.08269357702488378
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(50)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.7886230349541	2	648.783907	1295.55326	0.30769	0.00019962	0.51416	0.00033358	0.82184	0.0005332	648.7846914029177	51.413	0.52662	53.389	53.03	53.556	1.9753					26	19	2	0	0	0	0.099302	1	21580	21580		49.554	35.648	1	1297500			41578	3062	20320	20406	48082	48082		54			-0.08269357702488378
VYMDWYEKF	9	Oxidation (M)	_VYM(Oxidation (M))DWYEKF_		VYM(1)DWYEKF		VYM(40)DWYEKF	0	0	1		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	648.7850829958916	2	648.783907	1295.55326	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.021	1	53.993	53.493	54.493	1.9722								0	0	0	0.070941	1	21800	21800		40.239	27.197	1				41579	3062	20320	20406	48083	48083		54			-0.08269357702488378
VYMDWYEKF	9	Unmodified	_VYMDWYEKF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	640.7879516482353	2	640.78645	1279.55835	2.5126	0.0016101	-0.31141	-0.00019954	2.2012	0.0014105	640.7867494970019	61.618	1.3354	63.035	62.744	64.079	1.4177					141	42	6	0	0	0	0.00020031	8	25896	25770;25818;25857;25896;25936;25975;26018;26083		142.08	104.11	1	185910000			41580	3062	20320	20407	48084;48085;48086;48087;48088;48089;48090;48091	48087					-0.0702505383985681
VYMDWYEKF	9	Unmodified	_VYMDWYEKF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;ENST00000497539.5_1_2:96940752-96950410:-|nuORF;ENST00000480242.1_1_2:96950056-96950410:-|nuORF	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	640.7877075076103	2	640.78645	1279.55835	2.1741	0.0013931	-0.14529	-9.3099E-05	2.0288	0.0013	640.7868563042387	61.114	1.2469	63.08	62.76	64.007	1.9653					131	39	6	0	0	0	5.27E-05	7	25621	25573;25621;25660;25699;25739;25781;25837		149.91	111.94	1	169600000			41581	3062	20320	20407	48092;48093;48094;48095;48096;48097;48098	48093					-0.0702505383985681
VYMKVDGEVL	10	Unmodified	_VYMKVDGEVL_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35556271-35557194|103|98.46|0.33|8.2|+|0|ERGIC3,ERGIC3|1	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8044311404228	2	576.8021	1151.58965	1.6846	0.00097169	1.52	0.00087676	3.2046	0.0018484	576.8030176386673	42.557	0.28233	43.897	43.732	44.014	1.3399					18	8	3	0	0	0	0.6819	1	17850	17850		19.257	2.1441	1	1003800			41582	2295	20321	20408	48099	48099					0.019915191942573074
VYMKVDGEVL	10	Unmodified	_VYMKVDGEVL_					0	0	0		ENSG00000125991|ENST00000348547|ERGIC3;nc|ENSG00000125991|Q9Y282-3|ERGIC3;chr20:35556271-35557194|103|98.46|0.33|8.2|+|0|ERGIC3,ERGIC3|1	ENSG00000125991|ENST00000348547|ERGIC3	ENSG00000125991|ENST00000348547|ERGIC3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8035766482353	2	576.8021	1151.58965	1.6923	0.00097614	0.2039	0.00011761	1.8962	0.0010938	577.3038238439913	42.047	0.18364	43.968	43.827	44.011	1.9211					7	5	2	0	0	0	0.81324	1	17591	17591		10.824	0.024421	1	1262600			41583	2295	20321	20408	48100	48100					0.019915191942573074
VYMNRVKEI	9	Unmodified	_VYMNRVKEI_					0	0	0		ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF	ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.8176147341728	2	576.315709	1150.61686	1.7346	0.00099969	-4.0617	-0.0023408	-2.3271	-0.0013411	576.8159008381872	56.964	0.48412	58.378	58.153	58.637	1.4145					33	15	3	0	0	0	0.12251	1	23854	23854		41.84	12.758	1	8030000			41584	4989	20322	20409	48101	48101					0.04758047525319853
VYMNRVKEI	9	Unmodified	_VYMNRVKEI_					0	0	0		ENSG00000197223|ENST00000410067|C1D;ENST00000455013.2_1_10:81784495-81784867:-|nuORF	ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.8171264529228	2	576.315709	1150.61686	1.0396	0.00059915	-4.1968	-0.0024187	-3.1572	-0.0018195	576.816243914173	56.391	0.45461	58.36	58.149	58.603	1.9684					35	14	3	0	0	0	0.23535	1	23651	23651		29.082	2.7403	1	6877400			41585	4989	20322	20409	48102	48102					0.04758047525319853
VYNDHSIYVW	10	Unmodified	_VYNDHSIYVW_					0	0	0		ENST00000505061.5_1_15:42105116-42107966:+|nuORF;nc|ENSG00000137802|O60336-2|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.3103515505791	2	648.306395	1294.59824	1.3324	0.00086378	3.9821	0.0025816	5.3145	0.0034454	648.3076798666373	49.086	0.37473	50.474	50.326	50.701	1.388					19	11	3	0	0	0	0.12205	1	20553	20553		60.074	39.659	1	1180900			41586	2788	20323	20410	48103	48103					-0.03727790844914125
VYNDHSIYVW	10	Unmodified	_VYNDHSIYVW_					0	0	0		ENST00000505061.5_1_15:42105116-42107966:+|nuORF;nc|ENSG00000137802|O60336-2|MAPKBP1;ENSG00000137802|ENST00000457542|MAPKBP1;nc|ENSG00000137802|O60336|MAPKBP1	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	ENST00000505061.5_1_15:42105116-42107966:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.8094360232353	2	648.306395	1294.59824	1.9773	0.0012819	0.43846	0.00028426	2.4158	0.0015662	648.3064488182332	48.595	0.2768	50.573	50.453	50.73	1.9772					17	8	3	0	0	0	0.1784	1	20386	20386		51.63	35.783	1	1173000			41587	2788	20323	20410	48104	48104					-0.03727790844914125
VYNENLVHMI	10	Unmodified	_VYNENLVHMI_					0	0	0		ENST00000425064.1_1_1:100858662-100858893:-|nuORF;ENSG00000116752|ENST00000369541|BCAS2	ENST00000425064.1_1_1:100858662-100858893:-|nuORF	ENST00000425064.1_1_1:100858662-100858893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.3119994997978	2	616.310623	1230.60669	1.7668	0.0010889	0.05278	3.2529E-05	1.8196	0.0011214	616.3106958192532	49.434	0.46054	50.825	50.612	51.072	1.3911					50	14	5	0	0	0	0.059752	3	20744	20646;20691;20744		96.367	58.703	1	14400000			41588	1986	20324	20411	48105;48106;48107	48107					0.0006143980008346261
VYNENLVHMI	10	Unmodified	_VYNENLVHMI_					0	0	0		ENST00000425064.1_1_1:100858662-100858893:-|nuORF;ENSG00000116752|ENST00000369541|BCAS2	ENST00000425064.1_1_1:100858662-100858893:-|nuORF	ENST00000425064.1_1_1:100858662-100858893:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.3119384646416	2	616.310623	1230.60669	1.6497	0.0010167	-0.32011	-0.00019728	1.3296	0.00081946	616.3106414170547	48.86	0.40044	50.837	50.637	51.038	1.9772					42	12	4	0	0	0	0.050638	3	20468	20425;20468;20511		100.09	40.722	1	13411000			41589	1986	20324	20411	48108;48109;48110	48109					0.0006143980008346261
VYNIHLAVNF	10	Unmodified	_VYNIHLAVNF_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.3246337771416	2	595.321848	1188.62914	2.9917	0.001781	1.4086	0.00083855	4.4003	0.0026196	595.3228867912048	61.621	0.40511	63.039	62.865	63.27	1.4177					28	12	3	0	0	0	0.043055	2	25871	25826;25871		81.89	56.899	1	4203000			41590	5077	20325	20412	48111;48112	48112					0.04237407260006876
VYNIHLAVNF	10	Unmodified	_VYNIHLAVNF_					0	0	0		ENST00000478340.2_1_6:35437033-35438524:+|nuORF;ENST00000472730.1_1_3:61728131-61728755:-|nuORF;ENSG00000198755|ENST00000322203|RPL10A;ENST00000464112.5_1_6:35436546-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	ENST00000478340.2_1_6:35437033-35438524:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.3253051638603	2	595.321848	1188.62914	2.5444	0.0015148	1.0163	0.000605	3.5607	0.0021198	595.3230874623241	61.086	0.30613	63.051	62.881	63.187	1.9653					23	9	3	0	0	0	0.050359	2	25615	25615;25664		78.728	54.707	1	3909500			41591	5077	20325	20412	48113;48114	48113					0.04237407260006876
VYNKSIVL	8	Unmodified	_VYNKSIVL_					0	0	0			REV__ENST00000380050.7_1_7:90836599-90836752:+|nuORF	REV__ENST00000380050.7_1_7:90836599-90836752:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	468.2817565798759	2	468.28166	934.548768	2.2987	0.0010764	-0.723	-0.00033857	1.5757	0.00073788	468.2812053452878	41.74	0.4334	43.066	42.843	43.276	1.3254					34	13	3	0	0	0	0.64261	1	17552	17552		36.044	3.9272	1	5064500	+		41592	12752	20326	20413	48115	48115					0.07887545936932838
VYNKSIVL	8	Unmodified	_VYNKSIVL_					0	0	0			REV__ENST00000380050.7_1_7:90836599-90836752:+|nuORF	REV__ENST00000380050.7_1_7:90836599-90836752:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	468.2811157107353	2	468.28166	934.548768	2.2751	0.0010654	-0.06403	-2.9984E-05	2.211	0.0010354	468.2815460647966	41.243	0.39679	43.136	42.928	43.325	1.8927					30	12	4	0	0	0	0.79422	1	17346	17346		21.747	3.6117	1	4366900	+		41593	12752	20326	20413	48116	48116					0.07887545936932838
VYNKVHITL	9	Unmodified	_VYNKVHITL_					0	0	0		ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	ENSG00000166228|ENST00000299299|PCBD1	ENSG00000166228|ENST00000299299|PCBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.8203002810478	2	543.818941	1085.62333	0.88807	0.00048295	0.85413	0.00046449	1.7422	0.00094744	543.8194025881328	28.915	0.24311	30.197	30.069	30.312	1.2825					12	7	2	0	0	0	0.046715	1	12115	12115		70.332	40.491	1	1159300			41594	3889	20327	20414	48117	48117					0.08394308748324875
VYNKVHITL	9	Unmodified	_VYNKVHITL_					0	0	0		ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	ENSG00000166228|ENST00000299299|PCBD1	ENSG00000166228|ENST00000299299|PCBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	362.8817016482353	3	362.88172	1085.62333	-0.19306	-7.0059E-05	3.3587	0.0012188	3.1656	0.0011487	362.88320485253627	28.924	0.67012	30.207	29.763	30.433	1.2825					39	21	3	0	0	0	0.079895	1	12134	12134		51.415	24.192	1	8377800			41595	3889	20327	20414	48118	48118					0.08394308748324875
VYNKVHITL	9	Unmodified	_VYNKVHITL_					0	0	0		ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	ENSG00000166228|ENST00000299299|PCBD1	ENSG00000166228|ENST00000299299|PCBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.8199340701103	2	543.818941	1085.62333	0.76137	0.00041404	0.70939	0.00038578	1.4708	0.00079982	543.8193274611647	28.332	0.36192	30.107	29.881	30.243	1.7754					14	11	2	0	0	0	0.053939	1	11848	11848		66.457	40.189	1	1659400			41596	3889	20327	20414	48119	48119					0.08394308748324875
VYNKVHITL	9	Unmodified	_VYNKVHITL_					0	0	0		ENSG00000166228|ENST00000299299|PCBD1;ENST00000493228.1_1_10:72643709-72647885:-|nuORF	ENSG00000166228|ENST00000299299|PCBD1	ENSG00000166228|ENST00000299299|PCBD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	362.8817932009697	3	362.88172	1085.62333	0.37512	0.00013612	1.4114	0.00051216	1.7865	0.00064829	362.88161430687796	28.302	0.67093	30.077	29.665	30.336	1.7754					41	21	4	0	0	0	0.04812	1	11852	11852		55.235	28.011	1	9271800			41597	3889	20327	20414	48120	48120					0.08394308748324875
VYNPFDSSV	9	Unmodified	_VYNPFDSSV_					0	0	0			REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	REV__nc|ENSG00000088387|Q9BZ29-6|DOCK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2401611208916	2	514.24019	1026.46583	2.2569	0.0011606	-2.7198	-0.0013986	-0.46292	-0.00023805	514.2388862211869	84.659	0.59084	85.818	85.527	86.118	1.159					87	18	8	0	0	0	0.49082	1	35469	35469		15.847	1.9411	1	27169000	+		41598	8458	20328	20415	48121	48121					-0.046348155816986036
VYNPVIYVF	9	Unmodified	_VYNPVIYVF_					0	0	0		ENSG00000054277|ENST00000366554|OPN3;ENST00000462265.5_1_1:241755332-241761290:-|nuORF;ENST00000463155.5_1_1:241757732-241840646:-|nuORF;nc|ENSG00000203668|Q9H1Y3-2|OPN3	ENSG00000054277|ENST00000366554|OPN3	ENSG00000054277|ENST00000366554|OPN3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.3044921755791	2	557.302593	1112.59063	3.4206	0.0019063	-2.0855	-0.0011622	1.3352	0.0007441	557.3010524869457	82.541	0.34909	83.754	83.602	83.951	1.2125					20	10	3	0	0	0	0.12174	1	34654	34654		42.095	23.96	1	865170			41599	712	20329	20416	48122	48122					0.03884101625453695
VYNPVIYVF	9	Unmodified	_VYNPVIYVF_					0	0	0		ENSG00000054277|ENST00000366554|OPN3;ENST00000462265.5_1_1:241755332-241761290:-|nuORF;ENST00000463155.5_1_1:241757732-241840646:-|nuORF;nc|ENSG00000203668|Q9H1Y3-2|OPN3	ENSG00000054277|ENST00000366554|OPN3	ENSG00000054277|ENST00000366554|OPN3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	557.302593	1112.59063	3.5198	0.0019616	1.0319	0.00057509	4.5518	0.0025367	557.302393597109	82.098	0.31721	83.768	83.575	83.892	1.67	0.0071559	0.0025357	NaN	42.095	17	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	833230			41600	712	20329	20416							0.03884101625453695
VYNPVRAEW	9	Unmodified	_VYNPVRAEW_					0	0	0		ENSG00000165572|ENST00000379485|KBTBD6	ENSG00000165572|ENST00000379485|KBTBD6	ENSG00000165572|ENST00000379485|KBTBD6	MSMS	GG20161007_CRH_Patient100_W632_01	3	567.2945434451103	2	567.290548	1132.56654	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.31	1	39.606	39.106	40.106	1.2961								0	0	0	0.27791	1	16075	16075		20.454	7.9221	1				41601	3847	20330	20417	48123	48123					0.005562611917866889
VYNSEYYHF	9	Unmodified	_VYNSEYYHF_					0	0	0		nc|ENSG00000112655|Q13308-3|PTK7;chr6:43132687-43141668|408|15.38|0.92|4.06|+|ENST00000349241|PTK7,PTK7;nc|ENSG00000112655|Q13308-2|PTK7;ENSG00000112655|ENST00000230419|PTK7;nc|ENSG00000112655|Q13308-6|PTK7;ENST00000487673.5_1_6:43111066-43128616:+|nuORF;nc|ENSG00000112655|Q13308-4|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	nc|ENSG00000112655|Q13308-3|PTK7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.2645141482353	2	611.264196	1220.51384	0.16424	0.00010039	1.0027	0.00061291	1.1669	0.0007133	611.264439732176	35.862	0.23458	37.139	37.053	37.288	1.2762					22	14	2	0	0	0	0.10294	1	15069	15069		48.346	29.089	1	1685400			41602	275	20331	20418	48124	48124					-0.08759741661674525
VYPASKMFPFI	11	Unmodified	_VYPASKMFPFI_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	650.7982055544853	2	650.343935	1298.67332	2.7909	0.0018151	0.35025	0.00022778	3.1412	0.0020428	650.3440016606621	75.116	0.28095	76.898	76.822	77.103	1.7817					13	8	2	0	0	0	0.14337	1	31521	31521		20.415	9.5906	1	757200			41603	4361	20332	20419	48125	48125					0.035926753619605734
VYPDGIRHI	9	Unmodified	_VYPDGIRHI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;ENST00000568291.2_1_16:70588380-70590279:+|nuORF;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	357.1985656619072	3	357.197819	1068.57163	-0.1746	-6.2365E-05	-0.287	-0.00010252	-0.4616	-0.00016488	357.1978890140644	21.839	0.23918	23.016	22.871	23.11	1.177					17	7	3	0	0	0	0.22861	1	9117	9117		29.841	10.584	1	1027000			41604	4895;15952	20333	20420	48126	48126					0.04008565054414248
VYPDGIRHI	9	Unmodified	_VYPDGIRHI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant;ENST00000568291.2_1_16:70588380-70590279:+|nuORF;SF3B3-DDX19B|4|fusion;SF3B3-DDX19B|1|fusion	ENSG00000189091|ENST00000302516|SF3B3;SF3B3-DDX19B|4|fusion	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	357.197819	1068.57163	0.066623	2.3798E-05	-1.1706	-0.00041812	-1.1039	-0.00039432	357.1974093330328	21.456	0.24029	23.072	22.931	23.171	1.6158	0.028033	-0.00049586	NaN	29.841	17	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1159100			41605	4895;15952	20333	20420							0.04008565054414248
VYPFIKRR	8	Unmodified	_VYPFIKRR_					0	0	0		tr|A0A553SM77|A0A553SM77_NIACIVanZfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_22030PE=4SV=1	tr|A0A553SM77|A0A553SM77_NIACIVanZfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_22030PE=4SV=1	tr|A0A553SM77|A0A553SM77_NIACIVanZfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_22030PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2223998904228	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.356	1	19.335	18.835	19.835	0.97922								0	0	0	1.0178	1	7643	7643		0.45834	0	1				41606	16371	20334	20421	48127	48127					0.109017385676907
VYPFPTFQPAF	11	Unmodified	_VYPFPTFQPAF_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3359863162041	2	657.331882	1312.64921	5.1193	0.0033651	0.14038	9.2278E-05	5.2597	0.0034574	657.3324373272562	88.14	0.47868	89.197	88.922	89.401	1.0562					33	14	3	0	0	0	0.024558	3	37157	37109;37157;37211		96.111	62.666	1	2735700			41607	2512	20335	20422	48128;48129;48130	48129					0.005391581999219852
VYPFPTFQPAF	11	Unmodified	_VYPFPTFQPAF_					0	0	0		ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	ENSG00000132017|ENST00000254337|DCAF15	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	657.8358032107353	2	657.331882	1312.64921	4.6084	0.0030292	0.67836	0.00044591	5.2868	0.0034752	657.3327508483627	87.705	0.47696	89.2	88.983	89.46	1.4953					32	14	3	0	0	0	0.11322	3	36963	36913;36963;37012		53.404	32.989	1	2582100			41608	2512	20335	20422	48131;48132;48133	48132					0.005391581999219852
VYPGDPLRF	9	Unmodified	_VYPGDPLRF_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.2825195193291	2	532.282192	1062.54983	1.5517	0.00082595	0.20348	0.00010831	1.7552	0.00093425	532.282344405341	48.923	0.95905	50.311	49.956	50.915	1.388					62	30	3	0	0	0	0.063746	5	20444	20394;20444;20483;20533;20573		62.573	43.316	1	28026000			41609	4166	20336	20423	48134;48135;48136;48137;48138	48135					0.021057603058579843
VYPGDPLRF	9	Unmodified	_VYPGDPLRF_					0	0	0		ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	ENSG00000170892|ENST00000396388|TSEN34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.2829467654228	2	532.282192	1062.54983	2.3482	0.0012499	-0.7631	-0.00040619	1.5851	0.00084372	532.2818204743345	48.369	0.86425	50.347	50.053	50.917	1.9772					57	27	3	0	0	0	0.086433	5	20286	20199;20247;20286;20325;20364		53.833	33.379	1	24033000			41610	4166	20336	20423	48139;48140;48141;48142;48143	48141					0.021057603058579843
VYPGLAVFF	9	Unmodified	_VYPGLAVFF_					0	0	0		ENST00000442441.5_1_21:34823127-34828329:-|nuORF;ENSG00000142188|ENST00000542230|TMEM50B	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1012.554431140423	1	1012.55023	1011.54295	3.7671	0.0038144	2.2898	0.0023185	6.0569	0.0061329	1012.5520216877118	91.972	0.49654	92.908	92.617	93.114	0.93623					31	15	3	0	0	0	0.11074	2	38715	38671;38715		45.75	0	1	5856000			41611	2988	20337	20424	48144;48145	48145					0.037644474252715554
VYPGLAVFF	9	Unmodified	_VYPGLAVFF_					0	0	0		ENST00000442441.5_1_21:34823127-34828329:-|nuORF;ENSG00000142188|ENST00000542230|TMEM50B	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	506.7816650271416	2	506.778754	1011.54295	4.4514	0.0022559	0.56023	0.00028391	5.0117	0.0025398	506.77903902024383	92.036	0.37582	92.972	92.706	93.082	0.93623					30	11	3	0	0	0	0.16975	1	38758	38758		36.466	0	1	2617700			41612	2988	20337	20424	48146	48146					0.037644474252715554
VYPGLAVFF	9	Unmodified	_VYPGLAVFF_					0	0	0		ENST00000442441.5_1_21:34823127-34828329:-|nuORF;ENSG00000142188|ENST00000542230|TMEM50B	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1012.553149402142	1	1012.55023	1011.54295	3.3167	0.0033583	-0.092876	-9.4042E-05	3.2238	0.0032643	1012.550217483258	91.517	0.46281	92.843	92.558	93.021	1.3269					28	14	3	0	0	0	0.08022	3	38515	38468;38515;38559		56.048	0	1	4683400			41613	2988	20337	20424	48147;48148;48149	48148					0.037644474252715554
VYPGLAVFF	9	Unmodified	_VYPGLAVFF_					0	0	0		ENST00000442441.5_1_21:34823127-34828329:-|nuORF;ENSG00000142188|ENST00000542230|TMEM50B	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	ENST00000442441.5_1_21:34823127-34828329:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	506.7822753787041	2	506.778754	1011.54295	3.3077	0.0016763	2.5741	0.0013045	5.8818	0.0029808	506.7800900580627	91.44	0.28209	92.806	92.746	93.028	1.366					15	8	2	0	0	0	0.39097	1	38535	38535		20.871	0	1	1633000			41614	2988	20337	20424	48150	48150					0.037644474252715554
VYPLMKEYF	9	Unmodified	_VYPLMKEYF_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2982665896416	2	595.301736	1188.58892	1.0309	0.00061372	-0.031442	-1.8717E-05	0.9995	0.00059501	595.3017197131034	58.425	0.65873	59.843	59.44	60.099	1.4181					38	21	3	0	0	0	0.23535	1	24425	24425		29.082	8.628	1	2701900			41615	1243	20338	20425	48151	48151					0.0021672454518011364
VYPLMKEYF	9	Unmodified	_VYPLMKEYF_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.3017455935478	2	595.301736	1188.58892	0.70833	0.00042167	-2.2182	-0.0013205	-1.5099	-0.00089884	595.3001192086921	58.039	0.63317	60.008	59.515	60.148	1.969					37	22	2	0	0	0	0.35391	1	24326	24326		22.736	8.8302	1	4127700			41616	1243	20338	20425	48152	48152					0.0021672454518011364
VYPPSFIF	8	Unmodified	_VYPPSFIF_					0	0	0		INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant;ENSG00000123999|ENST00000243786|INHA	INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant	INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	969.5109741091728	1	969.508032	968.500755	1.6888	0.0016373	-0.34397	-0.00033348	1.3448	0.0013038	969.5081244911128	79.207	0.37062	80.942	80.753	81.124	1.735					15	11	2	0	0	0	0.82039	1	33249	33249		19.439	0	1	626430			41617	2202	20339	20426	48153	48153					0.015244720169107495
VYPPSFIF	8	Unmodified	_VYPPSFIF_					0	0	0		INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant;ENSG00000123999|ENST00000243786|INHA	INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant	INHA|p.C291S|1|0.4|ENSG00000123999|chr2:219575297-219575297|G/C|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	969.508032	968.500755	2.3103	0.0022398	1.5346	0.0014878	3.8449	0.0037277	969.5090629869868	79.776	0.33988	81.027	80.831	81.171	1.2512	0.042486	0.0010302	NaN	19.439	11	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660220			41618	2202	20339	20426							0.015244720169107495
VYPTSFIITI	10	Unmodified	_VYPTSFIITI_					0	0	0		nc|ENSG00000169894|Q02505-4|MUC3A;nc|ENSG00000169894|Q02505-5|MUC3A;ENSG00000169894|ENST00000379458|MUC3A;MUC3A|p.F2806Sfs*33|1|0.04|ENSG00000169894|chr7:100960195-100960196|TT/-|frameshift_variant;nc|ENSG00000169894|Q02505-2|MUC3A;nc|ENSG00000169894|Q02505-3|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	nc|ENSG00000169894|Q02505-4|MUC3A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.3310424685478	2	577.328808	1152.64306	5.8429	0.0033733	-1.2152	-0.00070155	4.6277	0.0026717	577.327714054012	88.768	0.32446	89.824	89.594	89.918	1.0562					23	9	3	0	0	0	0.72157	1	37384	37384		26.884	1.4843	1	1493300			41619	4117	20340	20427	48154	48154					0.07284639968429474
VYPVEEALL	9	Unmodified	_VYPVEEALL_					0	0	0		nc|ENSG00000138709|Q659C4-4|LARP1B;nc|ENSG00000138709|Q659C4-3|LARP1B;nc|ENSG00000138709|Q659C4-9|LARP1B;nc|ENSG00000138709|Q659C4-2|LARP1B;ENSG00000138709|ENST00000326639|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	nc|ENSG00000138709|Q659C4-4|LARP1B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7848998904228	2	516.784233	1031.55391	2.8376	0.0014664	2.0739	0.0010718	4.9115	0.0025382	516.7834368290642	87.358	0.69833	87.358	87.211	87.909	0					32	24	2	0	0	0	0.44535	1	36528	36528		18.135	1.1927	1	3331000			41620	2849	20341	20428	48155	48155					0.039398050088948366
VYQFGSALAHF	11	Unmodified	_VYQFGSALAHF_					0	0	0		ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	620.3133422732353	2	620.31148	1238.60841	2.1857	0.0013558	-2.3531	-0.0014596	-0.16736	-0.00010382	620.3087500056823	59.621	0.40791	61.041	60.738	61.146	1.4196					29	12	4	0	0	0	0.22891	1	24969	24969		56.177	38.031	1	2772500			41621	4623	20342	20429	48156	48156					-0.0013518311968709895
VYQFGSALAHF	11	Unmodified	_VYQFGSALAHF_					0	0	0		ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	ENSG00000182749|ENST00000675840|PAQR7	MSMS	GG20161007_CRH_Patient100_W632_02	4	620.3135253787041	2	620.31148	1238.60841	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.074	1	61.043	60.543	61.543	1.969								0	0	0	0.18936	1	24784	24784		61.357	43.211	1				41622	4623	20342	20429	48157	48157					-0.0013518311968709895
VYQHLFTRI	9	Unmodified	_VYQHLFTRI_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	392.8887817263603	3	392.888986	1175.64513	-0.035118	-1.3798E-05	-0.26823	-0.00010538	-0.30335	-0.00011918	392.88882169813616	33.003	0.46198	34.281	34.055	34.517	1.2782					47	18	4	0	0	0	0.043696	3	13843	13804;13843;13892		59.052	37.515	1	14303000			41623	5347	20343	20430	48158;48159;48160	48159					0.0643311349688247
VYQHLFTRI	9	Unmodified	_VYQHLFTRI_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.8294555544853	2	588.82984	1175.64513	0.57245	0.00033708	-0.64882	-0.00038205	-0.076373	-4.4971E-05	588.8295374175832	33.03	0.33223	34.308	34.108	34.44	1.2782					22	12	2	0	0	0	0.045139	2	13862	13817;13862		71.708	35.664	1	3998000			41624	5347	20343	20430	48161;48162	48162					0.0643311349688247
VYQHLFTRI	9	Unmodified	_VYQHLFTRI_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	392.8891174197197	3	392.888986	1175.64513	0.655	0.00025734	0.035855	1.4087E-05	0.69086	0.00027143	392.88893632642487	32.407	0.54962	34.232	33.972	34.521	1.8246					56	20	4	0	0	0	0.1052	3	13598	13549;13598;13647		37.771	21.622	1	15638000			41625	5347	20343	20430	48163;48164;48165	48164					0.0643311349688247
VYQHLFTRI	9	Unmodified	_VYQHLFTRI_					0	0	0		nc|ENSG00000242802|O43299-3|AP5Z1;ENST00000477680.5_1_7:4815294-4829561:+|nuORF;nc|ENSG00000242802|O43299-2|AP5Z1;ENST00000496303.5_1_7:4815289-4829878:+|nuORF;ENSG00000242802|ENST00000649063|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	nc|ENSG00000242802|O43299-3|AP5Z1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.8305541872978	2	588.82984	1175.64513	0.84389	0.00049691	0.10009	5.8938E-05	0.94398	0.00055585	588.8299004326312	32.399	0.3322	34.224	34.063	34.395	1.8246					26	10	3	0	0	0	0.093705	2	13575	13575;13628		51.415	13.826	1	2453900			41626	5347	20343	20430	48166;48167	48166					0.0643311349688247
VYQLRFQFL	9	Unmodified	_VYQLRFQFL_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.3414794802666	2	607.340041	1212.66553	2.2953	0.0013941	-0.33818	-0.00020539	1.9572	0.0011887	607.3398804212592	72.206	0.52568	73.536	73.236	73.762	1.3298					50	16	4	0	0	0	0.002761	3	30291	30253;30291;30329		128.37	88.126	1	13971000			41627	833	20344	20431	48168;48169;48170	48169					0.06770284156687012
VYQLRFQFL	9	Unmodified	_VYQLRFQFL_					0	0	0		ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	ENSG00000068654|ENST00000263857|POLR1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.3404418826103	2	607.340041	1212.66553	2.1764	0.0013218	-0.66433	-0.00040347	1.5121	0.00091836	607.3396388732369	71.668	0.52901	73.492	73.286	73.815	1.824					49	16	4	0	0	0	0.002761	3	30068	30020;30068;30107		128.37	88.126	1	13537000			41628	833	20344	20431	48171;48172;48173	48172					0.06770284156687012
VYQNDKKETN	10	Unmodified	_VYQNDKKETN_					0	0	0		tr|A0A7D6VRQ8|A0A7D6VRQ8_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03090PE=3SV=1	tr|A0A7D6VRQ8|A0A7D6VRQ8_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03090PE=3SV=1	tr|A0A7D6VRQ8|A0A7D6VRQ8_9CLOTMethyl-acceptingchemotaxisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03090PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8028442263603	2	619.804217	1237.59388	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.04	1	96.442	95.942	96.942	0.40208								0	0	0	0.65539	1	40401	40401		9.3831	3.6513	1				41629	16840	20345	20432	48174	48174					-0.01541300058465822
VYQVLQEHL	9	Unmodified	_VYQVLQEHL_					0	0	0		BMP7-DYNC2LI1|1|fusion;ENSG00000101144|ENST00000395863|BMP7	BMP7-DYNC2LI1|1|fusion	BMP7-DYNC2LI1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8074828982353	2	564.806031	1127.59751	2.3756	0.0013418	-1.1399	-0.00064385	1.2357	0.00069792	564.8054407282522	40.113	0.3078	41.423	41.269	41.577	1.3102					17	9	3	0	0	0	0.04812	2	16815	16815;16861		69.105	36.799	1	1763800			41630	105	20346	20433	48175;48176	48175					0.038814145060541705
VYQVLQEHL	9	Unmodified	_VYQVLQEHL_					0	0	0		BMP7-DYNC2LI1|1|fusion;ENSG00000101144|ENST00000395863|BMP7	BMP7-DYNC2LI1|1|fusion	BMP7-DYNC2LI1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8061401247978	2	564.806031	1127.59751	1.7572	0.00099248	-1.3565	-0.00076614	0.40074	0.00022634	564.8051701591933	39.713	0.30481	41.576	41.433	41.738	1.8624					19	9	3	0	0	0	0.057024	2	16632	16632;16683		65.235	36.748	1	1278400			41631	105	20346	20433	48177;48178	48177					0.038814145060541705
VYREIVKNL	9	Unmodified	_VYREIVKNL_					0	0	0		nc|ENSG00000186684|Q4G0S4-1|CYP27C1;ENSG00000186684|ENST00000664447|CYP27C1;nc|ENSG00000186684|Q4G0S4|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	nc|ENSG00000186684|Q4G0S4-1|CYP27C1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3389160037041	2	567.337498	1132.66044	2.9375	0.0016666	1.6592	0.00094131	4.5967	0.0026079	567.3380161006522	70.183	0.43966	71.537	71.272	71.712	1.3536					28	13	3	0	0	0	0.39927	1	29429	29429		20.454	2.3186	1	2933100			41632	4801	20347	20434	48179	48179					0.09941980294070163
VYRHDKRI	8	Unmodified	_VYRHDKRI_					0	0	0		RAB3D|p.G94Efs*79|1|0.14|ENSG00000105514|chr19:11335731-11335731|C/-|frameshift_variant;ENSG00000105514|ENST00000222120|RAB3D	RAB3D|p.G94Efs*79|1|0.14|ENSG00000105514|chr19:11335731-11335731|C/-|frameshift_variant	RAB3D|p.G94Efs*79|1|0.14|ENSG00000105514|chr19:11335731-11335731|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	543.3074218630791	2	543.811982	1085.60941	1.7916	0.00097432	-2.9739	-0.0016172	-1.1822	-0.00064291	543.809886010426	46.517	0.45644	48.488	48.315	48.771	1.9703					26	14	3	0	0	0	2.3239	1	19567	19567		6.3541	0	1	1569100			41633	1522	20348	20435	48180	48180					0.07003076039904954
VYRKLYRRHLK	11	Unmodified	_VYRKLYRRHLK_					0	0	0		L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|11|1|sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|11|1|sense	L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|11|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	307.3932983279228	5	307.192463	1530.92593	0.51103	0.00015698	1.4659	0.00045031	1.9769	0.00060729	307.393104304741	56.762	0.49088	58.176	57.971	58.462	1.4145					20	15	2	0	0	0	1.0402	1	23860	23860		0.094841	0.011491	1	3143300			41634	7695	20349	20436	48181	48181					0.18170869207369833
VYRRIYINYVR	11	Unmodified	_VYRRIYINYVR_					0	0	0			REV__ENST00000394361.8_1_16:57596005-57608989:+|nuORF	REV__ENST00000394361.8_1_16:57596005-57608989:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	757.9344360232353	2	757.93316	1513.85177	2.5666	0.0019453	-1.3881	-0.0010521	1.1785	0.00089321	757.9323700264642	86.917	0.89062	87.161	86.606	87.496	0.24387					229	35	7	0	0	0	1.0362	1	36167	36167		1.3295	0.13619	1	600830000	+		41635	12827	20350	20437	48182	48182					0.11539481325212364
VYRTMRNKK	9	Unmodified	_VYRTMRNKK_					0	0	0			REV__tr|A0A7D6VUX0|A0A7D6VUX0_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03220PE=3SV=1	REV__tr|A0A7D6VUX0|A0A7D6VUX0_9CLOTEndosporegerminationpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_03220PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	399.2513610720634	3	399.229125	1194.66555	0.55585	0.00022191	0.12329	4.9221E-05	0.67914	0.00027113	399.2284804777289	28.259	0.30185	29.538	29.396	29.698	1.2789					21	9	3	0	0	0	0.11954	1	11809	11809		0.26902	0	1	448860	+		41636	15521	20351	20438	48183	48183					0.0759996088504522
VYRVSQFY	8	Unmodified	_VYRVSQFY_					0	0	0			REV__tr|A0A7D6ZII5|A0A7D6ZII5_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04435PE=3SV=1	REV__tr|A0A7D6ZII5|A0A7D6ZII5_9CLOTLTAsynthasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04435PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	531.2746459841728	2	531.274367	1060.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.78	1	104.83	104.33	105.33	0.056801								0	0	0	1.0178	1	44271	44271		2.3027	0.65011	1		+		41637	15664	20352	20439	48184	48184					0.006334737888209929
VYSAAIYYR	9	Unmodified	_VYSAAIYYR_					0	0	0			REV__ENST00000523788.1_1_8:63942724-63951327:-|nuORF	REV__ENST00000523788.1_1_8:63942724-63951327:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.2885619997978	2	553.287474	1104.5604	2.8042	0.0015515	0.17435	9.6468E-05	2.9785	0.001648	553.2887521822453	75.082	0.64838	76.389	75.936	76.585	1.3063					44	20	4	0	0	0	0.46905	1	31481	31481		16.942	1.0951	1	4365000	+		41638	10022	20353	20440	48185	48185					0.012297429602540433
VYSALREIAF	10	Unmodified	_VYSALREIAF_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MSMS	GG20161007_CRH_Patient100_W632_01	3	584.8224365115166	2	584.821681	1167.62881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.951	1	57.361	56.861	57.861	1.4099								0	0	0	0.028864	1	23447	23447		49.527	21.898	1				41639	1605	20354	20441	48186	48186					0.05169987540148213
VYSEAARVLQF	11	Unmodified	_VYSEAARVLQF_					0	0	0		nc|ENSG00000156958|Q01415-2|GALK2;ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49584731-49620353:+|nuORF	nc|ENSG00000156958|Q01415-2|GALK2	nc|ENSG00000156958|Q01415-2|GALK2	MSMS	GG20161007_CRH_Patient100_W632_01	3	641.8441650271416	2	641.843145	1281.67174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.859	1	52.253	51.753	52.753	1.3938								0	0	0	0.00033123	1	21291	21291		64.927	40.906	1				41640	3458	20355	20442	48187	48187					0.04216757597555443
VYSEAARVLQF	11	Unmodified	_VYSEAARVLQF_					0	0	0		nc|ENSG00000156958|Q01415-2|GALK2;ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49584731-49620353:+|nuORF	nc|ENSG00000156958|Q01415-2|GALK2	nc|ENSG00000156958|Q01415-2|GALK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8430053591728	2	641.843145	1281.67174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.307	1	52.284	51.784	52.784	1.9772								0	0	0	2.2738E-11	1	21073	21073		91.085	65.685	1				41641	3458	20355	20442	48188	48188					0.04216757597555443
VYSEAARVLQF	11	Unmodified	_VYSEAARVLQF_					0	0	0		nc|ENSG00000156958|Q01415-2|GALK2;ENSG00000156958|ENST00000560031|GALK2;ENST00000560119.5_1_15:49584731-49620353:+|nuORF	nc|ENSG00000156958|Q01415-2|GALK2	nc|ENSG00000156958|Q01415-2|GALK2	MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8447753787041	2	641.843145	1281.67174	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.425	1	52.4	51.9	52.9	1.9753								0	0	0	0.066344	1	21126	21126		47.732	23.711	1				41642	3458	20355	20442	48189	48189					0.04216757597555443
VYSETVDLIKF	11	Unmodified	_VYSETVDLIKF_					0	0	0		AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant;nc|ENSG00000172493|P51825|AFF1;nc|ENSG00000172493|P51825-3|AFF1;ENSG00000172493|ENST00000395146|AFF1	AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant	AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	657.3556396365166	2	657.353011	1312.69147	2.6999	0.0017748	2.0525	0.0013492	4.7525	0.003124	657.3549540904932	62.42	0.27934	63.836	63.682	63.961	1.4161					18	8	3	0	0	0	0.085421	1	26180	26180		59.052	38.638	1	1552000			41643	25	20356	20443	48190	48190					0.04763088817639982
VYSETVDLIKF	11	Unmodified	_VYSETVDLIKF_					0	0	0		AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant;nc|ENSG00000172493|P51825|AFF1;nc|ENSG00000172493|P51825-3|AFF1;ENSG00000172493|ENST00000395146|AFF1	AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant	AFF1|p.K1086Sfs*71|1|0.1|ENSG00000172493|chr4:87132374-87132375|AA/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	657.353011	1312.69147	2.6803	0.0017619	0.29316	0.00019271	2.9735	0.0019546	657.3544280399728	61.848	0.21938	63.805	63.689	63.908	1.9571	-0.01576	-0.0012892	NaN	59.052	16	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1128700			41644	25	20356	20443							0.04763088817639982
VYSFGFERL	9	Unmodified	_VYSFGFERL_					0	0	0		nc|ENSG00000152683|Q6NXT4-4|SLC30A6;nc|ENSG00000152683|Q6NXT4-3|SLC30A6;SLC30A6|p.G434Efs*10|1|0.06|ENSG00000152683|chr2:32220624-32220640|ATTGGAGCAACTCAAGG/-|frameshift_variant;ENSG00000152683|ENST00000282587|SLC30A6;nc|ENSG00000152683|Q6NXT4-2|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2819091677666	2	559.287474	1116.5604	1.8951	0.0010599	1.9894	0.0011126	3.8845	0.0021726	559.2888837274337	56.785	0.27682	58.199	58.123	58.4	1.4145					23	8	4	0	0	0	0.033102	1	23794	23794		82.529	32.596	1	15975000			41645	3334	20357	20444	48191	48191					0.006777429603062046
VYSFGFERL	9	Unmodified	_VYSFGFERL_					0	0	0		nc|ENSG00000152683|Q6NXT4-4|SLC30A6;nc|ENSG00000152683|Q6NXT4-3|SLC30A6;SLC30A6|p.G434Efs*10|1|0.06|ENSG00000152683|chr2:32220624-32220640|ATTGGAGCAACTCAAGG/-|frameshift_variant;ENSG00000152683|ENST00000282587|SLC30A6;nc|ENSG00000152683|Q6NXT4-2|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	nc|ENSG00000152683|Q6NXT4-4|SLC30A6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	559.287474	1116.5604	1.076	0.00060178	2.833	0.0015845	3.909	0.0021862	559.2890574773321	56.288	0.18427	58.257	58.18	58.364	1.9684	0.0289	0.00053746	NaN	82.529	10	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	12098000			41646	3334	20357	20444							0.006777429603062046
VYSFLYKTI	9	Unmodified	_VYSFLYKTI_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3159667849541	2	567.3157	1132.61685	1.2239	0.00069431	-3.4549	-0.00196	-2.2311	-0.0012657	567.3126667781978	55.513	0.49102	56.922	56.504	56.995	1.4099					27	16	3	0	0	0	0.060242	1	23239	23239		63.961	33.324	1	4264900			41647	2402	20358	20445	48192	48192					0.055843707969415846
VYSFLYKTI	9	Unmodified	_VYSFLYKTI_					0	0	0		ENSG00000129354|ENST00000250244|AP1M2;nc|ENSG00000129354|Q9Y6Q5-2|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	ENSG00000129354|ENST00000250244|AP1M2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3166992068291	2	567.3157	1132.61685	0.67301	0.00038181	-2.9628	-0.0016808	-2.2897	-0.001299	567.8161646624847	55.022	0.49466	56.991	56.61	57.105	1.9684					38	16	3	0	0	0	0.043696	1	23056	23056		72.968	42.331	1	3311000			41648	2402	20358	20445	48193	48193					0.055843707969415846
VYSGGVYLF	9	Unmodified	_VYSGGVYLF_					0	0	0		ENST00000587406.5_1_19:19232302-19249261:-|nuORF;ENST00000589448.5_1_19:19230741-19243387:-|nuORF;ENSG00000064545|ENST00000162044|TMEM161A	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1004.510180652142	1	1004.50876	1003.50148	2.1857	0.0021955	0.056664	5.692E-05	2.2423	0.0022525	1004.5080431199373	67.479	0.43219	68.857	68.603	69.035	1.3778					32	13	3	0	0	0	0.046276	2	28343	28258;28343		70.716	2.6348	1	7102200			41649	773	20359	20446	48194;48195	48195					-0.00012733334040149202
VYSGGVYLF	9	Unmodified	_VYSGGVYLF_					0	0	0		ENST00000587406.5_1_19:19232302-19249261:-|nuORF;ENST00000589448.5_1_19:19230741-19243387:-|nuORF;ENSG00000064545|ENST00000162044|TMEM161A	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.7591735720634	2	502.758018	1003.50148	NaN	NaN	NaN	NaN	NaN	NaN	NaN	67.449	1	68.827	68.327	69.327	1.3778								0	0	0	0.11829	1	28297	28297		32.117	8.9685	1				41650	773	20359	20446	48196	48196					-0.00012733334040149202
VYSGGVYLF	9	Unmodified	_VYSGGVYLF_					0	0	0		ENST00000587406.5_1_19:19232302-19249261:-|nuORF;ENST00000589448.5_1_19:19230741-19243387:-|nuORF;ENSG00000064545|ENST00000162044|TMEM161A	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	ENST00000587406.5_1_19:19232302-19249261:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1004.510424792767	1	1004.50876	1003.50148	1.514	0.0015209	0.274	0.00027524	1.788	0.0017961	1004.5084472138682	67.019	0.4026	68.908	68.646	69.048	1.8889					31	12	3	0	0	0	0.028763	1	28104	28104		89.427	11.277	1	9501100			41651	773	20359	20446	48197	48197					-0.00012733334040149202
VYSHLPDLL	9	Unmodified	_VYSHLPDLL_					0	0	0		ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.7900878787041	2	528.78985	1055.56515	1.5892	0.00084037	-1.2059	-0.00063766	0.38334	0.00020271	528.7889968740822	54.829	0.53299	56.234	55.995	56.528	1.4048					42	17	3	0	0	0	0.026628	2	22923	22923;22976		92.822	45.073	1	6131000			41652	3133	20360	20447	48198;48199	48198					0.03958627103043
VYSHLPDLL	9	Unmodified	_VYSHLPDLL_					0	0	0		ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	ENSG00000146072|ENST00000296861|TNFRSF21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.7902099490166	2	528.78985	1055.56515	2.1571	0.0011406	-1.9448	-0.0010284	0.21226	0.00011224	528.788564822374	54.336	0.55463	56.305	56.001	56.556	1.9684					43	17	3	0	0	0	0.033794	2	22751	22751;22805		81.613	41.663	1	5421000			41653	3133	20360	20447	48200;48201	48200					0.03958627103043
VYSIVPQSW	9	Unmodified	_VYSIVPQSW_					0	0	0		ENST00000521120.1_1_12:50835423-50848201:+|nuORF;nc|ENSG00000161813|Q71RC2-7|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1078.557788074017	1	1078.55677	1077.5495	2.8424	0.0030657	-0.97986	-0.0010568	1.8625	0.0020088	1078.5556255165252	65.503	0.49304	66.902	66.571	67.064	1.3989					37	15	3	0	0	0	0.01454	2	27465	27414;27465		103.75	56	1	3832300			41654	3598	20361	20448	48202;48203	48203					0.013823405859966442
VYSIVPQSW	9	Unmodified	_VYSIVPQSW_					0	0	0		ENST00000521120.1_1_12:50835423-50848201:+|nuORF;nc|ENSG00000161813|Q71RC2-7|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.7816039919853	2	539.782025	1077.5495	1.9304	0.001042	-2.3953	-0.001293	-0.46495	-0.00025097	539.7811481968726	65.05	0.68892	66.959	66.468	67.157	1.9085					49	21	3	0	0	0	0.045797	2	27264	27215;27264		71.134	36.732	1	4503700			41655	3598	20361	20448	48204;48205	48205					0.013823405859966442
VYSIVPQSW	9	Unmodified	_VYSIVPQSW_					0	0	0		ENST00000521120.1_1_12:50835423-50848201:+|nuORF;nc|ENSG00000161813|Q71RC2-7|LARP4;nc|ENSG00000161813|Q71RC2-2|LARP4;nc|ENSG00000161813|Q71RC2-6|LARP4;nc|ENSG00000161813|Q71RC2-3|LARP4;ENSG00000161813|ENST00000398473|LARP4;nc|ENSG00000161813|Q71RC2-4|LARP4	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	ENST00000521120.1_1_12:50835423-50848201:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1078.557910144329	1	1078.55677	1077.5495	2.1197	0.0022862	-0.46429	-0.00050077	1.6554	0.0017854	1078.5565419113357	65.023	0.46806	66.932	66.658	67.126	1.9085					34	14	3	0	0	0	0.023786	3	27293	27248;27293;27347		96.285	46.352	1	2893000			41656	3598	20361	20448	48206;48207;48208	48207					0.013823405859966442
VYSLQQFGF	9	Unmodified	_VYSLQQFGF_					0	0	0		nc|ENSG00000049656|Q96KA5-2|CLPTM1L;ENSG00000049656|ENST00000320895|CLPTM1L	nc|ENSG00000049656|Q96KA5-2|CLPTM1L	nc|ENSG00000049656|Q96KA5-2|CLPTM1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.7756835818291	2	544.7742	1087.53385	2.8714	0.0015643	0.46012	0.00025066	3.3316	0.0018149	544.7741560933088	74.624	0.50851	76.405	76.099	76.608	1.7817					23	15	2	0	0	0	0.029093	2	31279	31279;31330		88.904	36.635	1	9300500			41657	693	20362	20449	48209;48210	48209					-0.00641945931056398
VYSLYMSFT	9	Unmodified	_VYSLYMSFT_					0	0	0		tr|A0A553SJ95|A0A553SJ95_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16365PE=3SV=1	tr|A0A553SJ95|A0A553SJ95_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16365PE=3SV=1	tr|A0A553SJ95|A0A553SJ95_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_16365PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.7650634646416	2	555.762443	1109.51033	2.831	0.0015733	3.8001	0.002112	6.6311	0.0036853	555.7645851277053	75.065	0.37218	76.372	76.182	76.555	1.3063					19	11	2	0	0	0	0.24063	1	31536	31536		28.487	6.7402	1	1161600			41658	16233	20363	20450	48211	48211					-0.040041277598902525
VYSPHVLNL	9	Unmodified	_VYSPHVLNL_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2;DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant;ENST00000441149.6_1_9:130980552-131010310:+|nuORF;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-2|DNM1;ENSG00000106976|ENST00000372923|DNM1	nc|ENSG00000197959|Q9UQ16-5|DNM3;DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2914306521416	2	521.290017	1040.56548	2.6715	0.0013926	1.809	0.00094302	4.4806	0.0023357	521.2909913899438	44.551	0.31699	45.916	45.771	46.088	1.3653					30	9	4	0	0	0	1.8436E-05	3	18714	18637;18674;18714		174.73	100.3	1	27977000			41659	5033;423	20364	20451	48212;48213;48214	48214					0.0468204682290434
VYSPHVLNL	9	Unmodified	_VYSPHVLNL_					0	0	0		nc|ENSG00000197959|Q9UQ16-5|DNM3;nc|ENSG00000197959|Q9UQ16-2|DNM3;ENSG00000197959|ENST00000627582|DNM3;nc|ENSG00000079805|P50570-2|DNM2;nc|ENSG00000197959|Q9UQ16|DNM3;nc|ENSG00000079805|P50570-5|DNM2;nc|ENSG00000079805|P50570|DNM2;nc|ENSG00000197959|Q9UQ16-4|DNM3;nc|ENSG00000079805|P50570-3|DNM2;ENSG00000079805|ENST00000389253|DNM2;DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant;ENST00000441149.6_1_9:130980552-131010310:+|nuORF;nc|ENSG00000106976|Q05193-5|DNM1;nc|ENSG00000106976|Q05193-3|DNM1;nc|ENSG00000106976|Q05193-2|DNM1;ENSG00000106976|ENST00000372923|DNM1	nc|ENSG00000197959|Q9UQ16-5|DNM3;DNM1|p.M272Tfs*25|1|0.31|ENSG00000106976|chr9:128220306-128220307|-/CCCAGCACTTTGGGAGGCCAAGCCGGGAGGAT|frameshift_variant	nc|ENSG00000197959|Q9UQ16-5|DNM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2911865115166	2	521.290017	1040.56548	2.179	0.0011359	2.2099	0.001152	4.389	0.0022879	521.2909494141674	43.905	0.35229	45.848	45.701	46.053	1.9438					31	10	4	0	0	0	2.4291E-05	3	18392	18392;18434;18480		168.66	99.159	1	22304000			41660	5033;423	20364	20451	48215;48216;48217	48215					0.0468204682290434
VYSPLGSAYKL	11	Unmodified	_VYSPLGSAYKL_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000514806.5_1_5:54965038-54993786:-|nuORF;nc|ENSG00000177058|Q8NBW4-2|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3311035037041	2	599.329339	1196.64412	1.3924	0.00083448	1.3362	0.00080085	2.7286	0.0016353	599.3304494577699	48.561	0.36663	49.949	49.712	50.079	1.388					23	11	3	0	0	0	0.12391	1	20321	20321		51.488	20.22	1	1763700			41661	4431	20365	20452	48218	48218					0.05366854337330551
VYSPLGSAYKL	11	Unmodified	_VYSPLGSAYKL_					0	0	0		nc|ENSG00000177058|Q8NBW4-4|SLC38A9;nc|ENSG00000177058|Q8NBW4-3|SLC38A9;ENSG00000177058|ENST00000396865|SLC38A9;ENST00000514806.5_1_5:54965038-54993786:-|nuORF;nc|ENSG00000177058|Q8NBW4-2|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	nc|ENSG00000177058|Q8NBW4-4|SLC38A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3289672732353	2	599.329339	1196.64412	2.3495	0.0014081	-0.30618	-0.0001835	2.0433	0.0012246	599.3291299862049	48.056	0.33786	50.034	49.837	50.175	1.9772					21	10	3	0	0	0	0.16349	1	20123	20123		44.392	18.993	1	1174900			41662	4431	20365	20452	48219	48219					0.05366854337330551
VYSPPFLF	8	Unmodified	_VYSPPFLF_					0	0	0			REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	485.2588073611259	2	485.257654	968.500755	2.779	0.0013485	-0.1408	-6.8325E-05	2.6382	0.0012802	485.25765501765744	79.771	0.49385	81.022	80.769	81.263	1.2512					36	15	3	0	0	0	0.72134	2	33458	33458;33508		28.173	0	1	1261600	+		41663	11693	20366	20453	48220;48221	48220					0.015244720169107495
VYSPPFLF	8	Unmodified	_VYSPPFLF_					0	0	0			REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2583801150322	2	485.257654	968.500755	1.7572	0.0008527	0.18307	8.8837E-05	1.9403	0.00094154	485.25795415742937	79.221	0.46356	80.956	80.722	81.185	1.735					25	14	2	0	0	0	0.72134	2	33259	33210;33259		28.173	0	1	1056200	+		41664	11693	20366	20453	48222;48223	48223					0.015244720169107495
VYSPPFLF	8	Unmodified	_VYSPPFLF_					0	0	0			REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	485.257654	968.500755	2.779	0.0013485	-0.1408	-6.8325E-05	2.6382	0.0012802	485.25765501765744	79.771	0.49385	81.022	80.769	81.263	1.2512	0.033055	-0.00014397	NaN	28.173	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1261600	+		41665	11693	20366	20453							0.015244720169107495
VYSPPFLF	8	Unmodified	_VYSPPFLF_					0	0	0			REV__ENSG00000197888|ENST00000317746|UGT2B17	REV__ENSG00000197888|ENST00000317746|UGT2B17	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	485.257654	968.500755	1.7572	0.0008527	0.18307	8.8837E-05	1.9403	0.00094154	485.25795415742937	79.221	0.46356	80.956	80.722	81.185	1.735	-0.033055	0.00017035	NaN	28.173	25	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1056200	+		41666	11693	20366	20453							0.015244720169107495
VYSQFITQL	9	Unmodified	_VYSQFITQL_					0	0	0		ENST00000496204.1_1_5:131931266-131935763:+|nuORF;nc|ENSG00000113522|Q92878-3|RAD50;ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7968017458916	2	549.795132	1097.57571	1.9177	0.0010544	0.32123	0.00017661	2.239	0.001231	549.7965758458076	63.757	0.46846	65.164	64.9	65.368	1.4071					55	14	6	0	0	0	0.091139	2	26736	26736;26781		52.268	25.385	1	7705100			41667	1824	20367	20454	48224;48225	48224					0.030826097574845335
VYSQFITQL	9	Unmodified	_VYSQFITQL_					0	0	0		ENST00000496204.1_1_5:131931266-131935763:+|nuORF;nc|ENSG00000113522|Q92878-3|RAD50;ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7976562380791	2	549.795132	1097.57571	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.203	1	65.148	64.648	65.648	1.9444								0	0	0	0.05056	1	26522	26522		58.679	28.042	1				41668	1824	20367	20454	48226	48226					0.030826097574845335
VYSQFITQL	9	Unmodified	_VYSQFITQL_					0	0	0		ENST00000496204.1_1_5:131931266-131935763:+|nuORF;nc|ENSG00000113522|Q92878-3|RAD50;ENSG00000113522|ENST00000378823|RAD50;nc|ENSG00000113522|Q92878-2|RAD50	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	ENST00000496204.1_1_5:131931266-131935763:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7971679568291	2	549.795132	1097.57571	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.324	1	65.268	64.768	65.768	1.9444								0	0	0	0.035377	1	26571	26571		68.081	30.107	1				41669	1824	20367	20454	48227	48227					0.030826097574845335
VYSQIPAAVKL	11	Unmodified	_VYSQIPAAVKL_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8553954958916	2	594.852981	1187.69141	2.1264	0.0012649	1.3428	0.00079877	3.4693	0.0020637	594.8538008965074	46.964	0.3819	48.347	48.122	48.504	1.3825					29	11	3	0	0	0	0.0028287	3	19702	19617;19664;19702		139.78	80.413	1	8485400			41670	24	20368	20455	48228;48229;48230	48230					0.10507133608325603
VYSQIPAAVKL	11	Unmodified	_VYSQIPAAVKL_					0	0	0		AFF1-UBR5|1|fusion;nc|ENSG00000104517|O95071-2|UBR5;ENSG00000104517|ENST00000520539|UBR5	AFF1-UBR5|1|fusion	AFF1-UBR5|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8551513552666	2	594.852981	1187.69141	1.8041	0.0010732	1.4883	0.0008853	3.2924	0.0019585	594.8539212664874	46.525	0.49014	48.495	48.251	48.741	1.9703					48	15	5	0	0	0	0.0013356	2	19490	19441;19490		121.5	77.521	1	9010200			41671	24	20368	20455	48231;48232	48232					0.10507133608325603
VYTDFAFRI	9	Unmodified	_VYTDFAFRI_					0	0	0		ENSG00000162408|ENST00000377705|NOL9;ENST00000462798.1_1_1:6592521-6593409:-|nuORF	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.2964355349541	2	566.295299	1130.57605	2.2494	0.0012738	-0.51915	-0.000294	1.7303	0.00097985	566.2950337679345	63.628	0.43024	65.041	64.816	65.246	1.4134					29	13	3	0	0	0	0.063746	1	26679	26679		62.573	34.944	1	6718200			41672	3617	20369	20456	48233	48233					0.015980294773271453
VYTDFAFRI	9	Unmodified	_VYTDFAFRI_					0	0	0		ENSG00000162408|ENST00000377705|NOL9;ENST00000462798.1_1_1:6592521-6593409:-|nuORF	ENSG00000162408|ENST00000377705|NOL9	ENSG00000162408|ENST00000377705|NOL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.2966796755791	2	566.295299	1130.57605	2.2327	0.0012644	-0.75727	-0.00042884	1.4754	0.00083553	566.2948380206615	63.037	0.40123	64.982	64.782	65.183	1.9444					30	12	3	0	0	0	0.033504	1	26459	26459		81.89	40.051	1	6250500			41673	3617	20369	20456	48234	48234					0.015980294773271453
VYTDILIGL	9	Unmodified	_VYTDILIGL_					0	0	0		DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant;DHX37|p.T447Rfs*41|1|0.33|ENSG00000150990|chr12:124968602-124968603|-/CTCCAGGAGTCCCTGCCAGCCCCCCACGTACC|frameshift_variant;DHX37|p.I700Afs*3|1|0.04|ENSG00000150990|chr12:124960362-124960372|TCCGGGTGATT/-|frameshift_variant;ENSG00000150990|ENST00000308736|DHX37	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	DHX37|p.Y452Tfs*26|1|0.2|ENSG00000150990|chr12:124968589-124968590|-/TA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.586169421673	1	1006.58192	1005.57465	3.065	0.0030852	-0.094418	-9.5039E-05	2.9706	0.0029902	1006.5806289662448	82.86	0.24738	84.072	83.951	84.199	1.2125					11	7	2	0	0	0	0.1735	1	34770	34770		36.044	0	1	1049000			41674	408	20370	20457	48235	48235					0.07208395388579447
VYTDWIMAL	9	Unmodified	_VYTDWIMAL_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2805053591728	2	556.27826	1110.54197	4.108	0.0022852	-0.11971	-6.6595E-05	3.9883	0.0022186	556.2781615044556	91.11	0.38081	92.092	91.878	92.259	0.98157					36	11	4	0	0	0	0.033521	2	38388	38339;38388		81.864	54.98	1	1880000			41675	4148	20371	20458	48236;48237	48237					-0.008881350059255055
VYTDWIMAL	9	Unmodified	_VYTDWIMAL_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1111.553149402142	1	1111.54924	1110.54197	3.7716	0.0041923	-0.5025	-0.00055855	3.2691	0.0036338	1111.5468450685269	91.105	0.28513	92.086	91.942	92.227	0.98157					12	8	2	0	0	0	0.046276	1	38353	38353		70.716	45.316	1	1850300			41676	4148	20371	20458	48238	48238					-0.008881350059255055
VYTDWIMAL	9	Unmodified	_VYTDWIMAL_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2808105349541	2	556.27826	1110.54197	3.7179	0.0020682	0.45505	0.00025313	4.173	0.0023213	556.2783585367686	90.645	0.38621	92.011	91.831	92.217	1.366					27	11	3	0	0	0	0.10722	3	38147	38147;38190;38234		46.921	25.174	1	2041400			41677	4148	20371	20458	48239;48240;48241	48239					-0.008881350059255055
VYTDWIMAL	9	Unmodified	_VYTDWIMAL_					0	0	0		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1111.550341784954	1	1111.54924	1110.54197	3.7843	0.0042064	-1.2183	-0.0013542	2.566	0.0028523	1111.5455244232548	90.699	0.19466	92.065	91.929	92.124	1.366					6	5	2	0	0	0	0.11478	1	38196	38196		44.407	19.008	1	1033800			41678	4148	20371	20458	48242	48242					-0.008881350059255055
VYTDWIMAL	9	Oxidation (M)	_VYTDWIM(Oxidation (M))AL_		VYTDWIM(1)AL		VYTDWIM(82)AL	0	0	1		nc|ENSG00000170471|Q86X10-3|RALGAPB;ENSG00000170471|ENST00000262879|RALGAPB;RALGAPB|p.C811Yfs*8|1|0.28|ENSG00000170471|chr20:38539828-38539829|GC/-|frameshift_variant;RALGAPB|p.D897Efs*7|1|0.04|ENSG00000170471|chr20:38541169-38541169|T/-|frameshift_variant;nc|ENSG00000170471|Q86X10-4|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	nc|ENSG00000170471|Q86X10-3|RALGAPB	MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2776977419853	2	564.275718	1126.53688	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.024	1	80.759	80.259	81.259	1.735								0	0	0	0.02596	1	33143	33143		81.864	37.457	1				41679	4148	20371	20459	48243	48243		70			-0.02132438868557074
VYTHGDERCI	10	Unmodified	_VYTHGDERCI_					0	0	0			REV__nc|ENSG00000127311|Q8NG08-2|HELB	REV__nc|ENSG00000127311|Q8NG08-2|HELB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7792846560478	2	596.774405	1191.53426	2.9711	0.0017731	3.3513	0.002	6.3224	0.0037731	596.7766375374698	75.055	0.55697	76.361	76.059	76.615	1.3063					56	17	5	0	0	0	0.73251	1	31471	31471		16.942	6.8684	1	3944800	+		41680	9711	20372	20460	48244	48244					-0.05384894273493046
VYTHGDERCI	10	Unmodified	_VYTHGDERCI_					0	0	0			REV__nc|ENSG00000127311|Q8NG08-2|HELB	REV__nc|ENSG00000127311|Q8NG08-2|HELB	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	596.774405	1191.53426	2.9711	0.0017731	3.3513	0.002	6.3224	0.0037731	596.7766375374698	75.055	0.55697	76.361	76.059	76.615	1.3063	-0.020785	0.00028197	NaN	16.942	56	17	5	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3944800	+		41681	9711	20372	20460							-0.05384894273493046
VYTHQSDVWSF	11	Unmodified	_VYTHQSDVWSF_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2;ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3;nc|ENSG00000160867|P22455-2|FGFR4;ENSG00000160867|ENST00000292408|FGFR4	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	684.8166992068291	2	684.814584	1367.61462	1.8952	0.0012979	-1.5422	-0.0010561	0.35307	0.00024179	684.8130091373126	47.152	0.31703	48.535	48.346	48.663	1.3825					17	9	2	0	0	0	0.25639	1	19732	19732		35.612	15.198	1	1241000			41682	807	20373	20461	48245	48245					-0.054487096788079725
VYTHQSDVWSF	11	Unmodified	_VYTHQSDVWSF_					0	0	0		ENST00000604236.5_1_10:123239373-123278228:-|nuORF;nc|ENSG00000066468|P21802-8|FGFR2;nc|ENSG00000066468|P21802-3|FGFR2;ENSG00000066468|ENST00000358487|FGFR2;nc|ENSG00000066468|P21802-18|FGFR2;nc|ENSG00000066468|P21802-5|FGFR2;nc|ENSG00000066468|P21802-6|FGFR2;nc|ENSG00000066468|P21802-17|FGFR2;nc|ENSG00000066468|P21802-22|FGFR2;nc|ENSG00000066468|P21802-2|FGFR2;nc|ENSG00000066468|P21802-23|FGFR2;nc|ENSG00000066468|P21802-21|FGFR2;nc|ENSG00000066468|P21802-15|FGFR2;nc|ENSG00000066468|P21802-20|FGFR2;nc|ENSG00000066468|P21802-4|FGFR2;nc|ENSG00000066468|P21802-16|FGFR2;ENSG00000068078|ENST00000440486|FGFR3;nc|ENSG00000068078|P22607-2|FGFR3;nc|ENSG00000068078|P22607-3|FGFR3;nc|ENSG00000160867|P22455-2|FGFR4;ENSG00000160867|ENST00000292408|FGFR4	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	ENST00000604236.5_1_10:123239373-123278228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	684.8146850466728	2	684.814584	1367.61462	1.3701	0.00093824	-1.416	-0.0009697	-0.045928	-3.1452E-05	684.8142952303984	46.673	0.33003	48.643	48.441	48.771	1.9703					21	10	3	0	0	0	0.33499	2	19519	19519;19572		29.437	18.613	1	809700			41683	807	20373	20461	48246;48247	48246					-0.054487096788079725
VYTILTVQL	9	Unmodified	_VYTILTVQL_					0	0	0		ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	525.3195678591728	2	525.3157	1048.61685	2.6697	0.0014024	1.3357	0.00070166	4.0054	0.0021041	525.316784269281	80.233	0.43564	81.485	81.324	81.76	1.2512					29	13	3	0	0	0	0.11478	2	33674	33674;33733		44.407	19.733	1	1477400			41684	1036	20374	20462	48248;48249	48248					0.09448370796917516
VYTILTVQL	9	Unmodified	_VYTILTVQL_					0	0	0		ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	ENSG00000082996|ENST00000392894|RNF13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.3168212771416	2	525.3157	1048.61685	1.3897	0.00073004	2.0409	0.0010721	3.4306	0.0018022	525.3169858027469	79.817	0.43645	81.534	81.321	81.758	1.7167					24	13	2	0	0	0	0.3154	1	33457	33457		24.674	2.2213	1	940350			41685	1036	20374	20462	48250	48250					0.09448370796917516
VYTKTISLW	9	Unmodified	_VYTKTISLW_					0	0	0		ENSG00000063601|ENST00000445323|MTMR1;nc|ENSG00000063601|Q13613|MTMR1	ENSG00000063601|ENST00000445323|MTMR1	ENSG00000063601|ENST00000445323|MTMR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8147460818291	2	555.813325	1109.6121	1.5833	0.00087999	2.2542	0.0012529	3.8374	0.0021329	555.8140293379865	49.959	0.34122	51.936	51.758	52.099	1.9772					15	10	2	0	0	0	0.49082	1	20968	20968		15.847	1.2655	1	3574800			41686	764	20375	20463	48251	48251					0.061674866541807205
VYTSGVYHI	9	Unmodified	_VYTSGVYHI_					0	0	0		nc|ENSG00000111077|Q63HR2-5|TNS2;TNS2|p.P1240Lfs*67|1|0.09|ENSG00000111077|chr12:53062426-53062427|-/T|frameshift_variant;nc|ENSG00000111077|Q63HR2-2|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2	nc|ENSG00000111077|Q63HR2-5|TNS2	nc|ENSG00000111077|Q63HR2-5|TNS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	519.1400634646416	2	519.766374	1037.5182	0.89237	0.00046383	1.4843	0.00077149	2.3767	0.0012353	519.7679848816786	31.06	0.22413	32.341	32.214	32.438	1.2813					10	6	2	0	0	0	0.11898	1	13038	13038		2.3027	1.5091	1	137840			41687	1725	20376	20464	48252	48252					0.0009376755190260155
VYTSGVYHI	9	Unmodified	_VYTSGVYHI_					0	0	0		nc|ENSG00000111077|Q63HR2-5|TNS2;TNS2|p.P1240Lfs*67|1|0.09|ENSG00000111077|chr12:53062426-53062427|-/T|frameshift_variant;nc|ENSG00000111077|Q63HR2-2|TNS2;ENST00000549311.7_1_12:53443879-53456445:+|nuORF;nc|ENSG00000111077|Q63HR2-6|TNS2;ENSG00000111077|ENST00000314250|TNS2;nc|ENSG00000111077|Q63HR2-4|TNS2	nc|ENSG00000111077|Q63HR2-5|TNS2	nc|ENSG00000111077|Q63HR2-5|TNS2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1403076052666	2	519.766374	1037.5182	0.88272	0.00045881	1.8839	0.0009792	2.7666	0.001438	519.7675221840874	30.484	0.18918	32.3	32.199	32.388	1.8151					7	5	2	0	0	0	0.11787	1	12776	12776		5.2307	0.47466	1	226700			41688	1725	20376	20464	48253	48253					0.0009376755190260155
VYTSKSDVWSF	11	Unmodified	_VYTSKSDVWSF_					0	0	0		nc|ENSG00000167601|P30530-2|AXL;ENSG00000167601|ENST00000301178|AXL	nc|ENSG00000167601|P30530-2|AXL	nc|ENSG00000167601|P30530-2|AXL	MSMS	GG20161007_CRH_Patient100_W632_01	3	659.8179199099541	2	659.819335	1317.62412	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.484	1	48.867	48.367	49.367	1.3825								0	0	0	0.63773	1	19879	19879		8.7454	2.5396	1				41689	3977	20377	20465	48254	48254					-0.02198941393317
VYTTNTILL	9	Unmodified	_VYTTNTILL_					0	0	0		DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant;DSC2|p.G687Wfs*36|1|0.04|ENSG00000134755|chr18:31071670-31071671|CC/-|frameshift_variant;nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1037.594775378704	1	1037.58774	1036.58046	1.9023	0.0019738	2.3664	0.0024553	4.2687	0.0044291	1037.5908836881554	59.321	0.21646	60.74	60.678	60.895	1.4196					10	6	2	0	0	0	0.19075	1	24892	24892		34.102	14.845	1	1088800			41690	429	20378	20466	48255	48255					0.06363493900244066
VYTTNTILL	9	Unmodified	_VYTTNTILL_					0	0	0		DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant;DSC2|p.G687Wfs*36|1|0.04|ENSG00000134755|chr18:31071670-31071671|CC/-|frameshift_variant;nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.2997924685478	2	519.297507	1036.58046	2.4086	0.0012508	2.1896	0.001137	4.5982	0.0023878	519.2989424797311	58.831	0.46593	60.8	60.633	61.099	1.969					30	14	3	0	0	0	0.44535	1	24675	24675		18.135	6.4947	1	2648800			41691	429	20378	20466	48256	48256					0.06363493900244066
VYTTNTILL	9	Unmodified	_VYTTNTILL_					0	0	0		DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant;DSC2|p.G687Wfs*36|1|0.04|ENSG00000134755|chr18:31071670-31071671|CC/-|frameshift_variant;nc|ENSG00000134755|Q02487-2|DSC2;ENSG00000134755|ENST00000280904|DSC2	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	DSC2|p.N344Tfs*5|1|0.06|ENSG00000134755|chr18:31082972-31082972|T/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1037.58774	1036.58046	3.2585	0.003381	-3.2822	-0.0034056	-0.023751	-2.4644E-05	1037.5869138100243	58.828	0.21433	60.797	60.694	60.908	1.969	0.028267	-0.0032865	NaN	34.102	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	696230			41692	429	20378	20466							0.06363493900244066
VYTVVDEMFL	10	Oxidation (M)	_VYTVVDEM(Oxidation (M))FL_		VYTVVDEM(1)FL		VYTVVDEM(51)FL	0	0	1		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.3001586794853	2	616.29939	1230.58423	1.8472	0.0011384	-0.18065	-0.00011133	1.6666	0.0010271	616.2992264807656	67.914	0.58062	69.292	69.125	69.706	1.3778					43	18	3	0	0	0	0.18471	1	28493	28493		50.855	29.108	1	1634900			41693	665	20379	20467	48257	48257		6			-0.021842043882088547
VYTVVDEMFL	10	Unmodified	_VYTVVDEMFL_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.3026611208916	2	608.301933	1214.58931	1.6174	0.00098388	-0.024229	-1.4739E-05	1.5932	0.00096914	608.3022571641475	84.231	0.40394	85.39	85.251	85.655	1.159					35	12	4	0	0	0	0.06639	2	35329	35329;35377		104.8	70.697	1	7978900			41694	665	20379	20468	48258;48259	48258					-0.009399005256000237
VYTVVDEMFL	10	Unmodified	_VYTVVDEMFL_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1215.603198230267	1	1215.59659	1214.58931	1.2534	0.0015236	-0.51209	-0.0006225	0.74128	0.0009011	1215.5962942122687	84.242	0.33879	85.401	85.251	85.589	1.159					20	10	3	0	0	0	0.04351	1	35379	35379		81.613	41.656	1	4885500			41695	665	20379	20468	48260	48260					-0.009399005256000237
VYTVVDEMFL	10	Unmodified	_VYTVVDEMFL_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3032104372978	2	608.301933	1214.58931	1.7911	0.0010896	-0.37631	-0.00022891	1.4148	0.00086064	608.3016359108095	83.792	0.46394	85.429	85.221	85.685	1.6379					37	14	4	0	0	0	0.06639	3	35147	35098;35147;35212		104.8	64.842	1	6449600			41696	665	20379	20468	48261;48262;48263	48262					-0.009399005256000237
VYTVVDEMFL	10	Unmodified	_VYTVVDEMFL_					0	0	0		GANC-AP2S1|1|fusion;ENSG00000042753|ENST00000263270|AP2S1;nc|ENSG00000042753|P53680-2|AP2S1	GANC-AP2S1|1|fusion	GANC-AP2S1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1215.597582995892	1	1215.59659	1214.58931	0.95128	0.0011564	-1.0423	-0.001267	-0.091044	-0.00011067	1215.5969304891173	83.79	0.33749	85.428	85.221	85.559	1.6379					14	10	2	0	0	0	0.09859	1	35136	35136		64.236	24.279	1	5369400			41697	665	20379	20468	48264	48264					-0.009399005256000237
VYVDDIYVI	9	Unmodified	_VYVDDIYVI_					0	0	0		nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;ENSG00000137812|ENST00000399668|KNL1;nc|ENSG00000137812|Q8NG31|KNL1	nc|ENSG00000137812|Q8NG31-3|KNL1	nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7910034060478	2	549.789515	1097.56448	2.6074	0.0014335	-2.0662	-0.001136	0.54113	0.00029751	549.7896916366554	72.475	0.4231	73.805	73.55	73.973	1.3297					24	13	2	0	0	0	0.20838	1	30440	30440		32.117	12.678	1	2098800			41698	2789	20380	20469	48265	48265					0.01959787663327006
VYVDDIYVI	9	Unmodified	_VYVDDIYVI_					0	0	0		nc|ENSG00000137812|Q8NG31-3|KNL1;nc|ENSG00000137812|Q8NG31-4|KNL1;ENST00000533001.1_1_15:40886490-40917961:+|nuORF;ENSG00000137812|ENST00000399668|KNL1;nc|ENSG00000137812|Q8NG31|KNL1	nc|ENSG00000137812|Q8NG31-3|KNL1	nc|ENSG00000137812|Q8NG31-3|KNL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.7917358279228	2	549.789515	1097.56448	2.6204	0.0014407	-1.3817	-0.00075964	1.2387	0.00068102	549.7902132472483	72.065	0.4227	73.888	73.634	74.056	1.824					26	13	3	0	0	0	0.44535	1	30243	30243		18.135	1.0484	1	2509900			41699	2789	20380	20469	48266	48266					0.01959787663327006
VYVDLGGSHVF	11	Unmodified	_VYVDLGGSHVF_					0	0	0		ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.8038207888603	2	596.803488	1191.59242	1.0437	0.0006229	-0.029761	-1.7761E-05	1.014	0.00060514	596.803380760542	52.486	0.40318	53.883	53.682	54.085	1.3966					31	12	3	0	0	0	0.0085845	3	21974	21925;21974;22013		107.19	67.237	1	42569000			41700	3855	20381	20470	48267;48268;48269	48268					0.004291106434266112
VYVDLGGSHVF	11	Unmodified	_VYVDLGGSHVF_					0	0	0		ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	ENSG00000165733|ENST00000374518|BMS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	596.8038207888603	2	596.803488	1191.59242	1.3246	0.0007905	-0.10842	-6.4703E-05	1.2161	0.0007258	596.8033739524225	51.905	0.4329	53.877	53.676	54.109	1.9722					32	13	3	0	0	0	0.0085845	3	21752	21709;21752;21791		107.19	67.237	1	40797000			41701	3855	20381	20470	48270;48271;48272	48271					0.004291106434266112
VYVEKISFL	9	Unmodified	_VYVEKISFL_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.3141357302666	2	549.3157	1096.61685	0.46676	0.0002564	2.0685	0.0011362	2.5352	0.0013926	549.3165753557895	58.319	0.70765	59.737	59.424	60.132	1.4181					26	11	3	0	0	0	0.023685	2	24402	24402;24440		96.367	35.009	1	25276000			41702	4173	20382	20471	48273;48274	48273					0.07240370796944262
VYVEKISFL	9	Unmodified	_VYVEKISFL_					0	0	0		ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	ENSG00000171017|ENST00000306708|LRRC8E	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.3149291872978	2	549.3157	1096.61685	0.29704	0.00016317	1.7532	0.00096305	2.0502	0.0011262	549.3163376016565	57.728	0.34282	59.697	59.499	59.842	1.969					33	13	3	0	0	0	0.0022704	2	24184	24184;24223		129.77	51.623	1	26598000			41703	4173	20382	20471	48275;48276	48275					0.07240370796944262
VYVERILLL	9	Unmodified	_VYVERILLL_					0	0	0		ENST00000564987.1_1_16:23535694-23546228:-|nuORF;ENSG00000103356|ENST00000449606|EARS2;nc|ENSG00000103356|Q5JPH6-2|EARS2	ENST00000564987.1_1_16:23535694-23546228:-|nuORF	ENST00000564987.1_1_16:23535694-23546228:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3530761599541	2	559.352617	1116.69068	2.0231	0.0011316	-0.99483	-0.00055646	1.0283	0.00057518	559.3520721465126	69.234	0.40604	70.599	70.381	70.787	1.3657					41	13	4	0	0	0	0.11077	1	29115	29115		45.74	16.658	1	23916000			41704	1430	20383	20472	48277	48277					0.13700338959301916
VYVERILLL	9	Unmodified	_VYVERILLL_					0	0	0		ENST00000564987.1_1_16:23535694-23546228:-|nuORF;ENSG00000103356|ENST00000449606|EARS2;nc|ENSG00000103356|Q5JPH6-2|EARS2	ENST00000564987.1_1_16:23535694-23546228:-|nuORF	ENST00000564987.1_1_16:23535694-23546228:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	559.352617	1116.69068	1.6216	0.00090706	-0.47462	-0.00026548	1.147	0.00064159	559.3525136747478	68.629	0.42807	70.482	70.281	70.709	1.853	-0.058634	0.00024431	NaN	45.74	41	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18588000			41705	1430	20383	20472							0.13700338959301916
VYVGSGGWRF	10	Unmodified	_VYVGSGGWRF_					0	0	0		ENST00000598424.5_1_19:17581379-17594898:+|nuORF;ENSG00000130304|ENST00000252595|SLC27A1	ENST00000598424.5_1_19:17581379-17594898:+|nuORF	ENST00000598424.5_1_19:17581379-17594898:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2847778201103	2	564.285266	1126.55598	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.577	1	50.555	50.055	51.055	1.9772								0	0	0	0.64423	1	20347	20347		19.362	4.5237	1				41706	2424	20384	20473	48278	48278					-0.002237214626120476
VYVGTLKLI	9	Unmodified	_VYVGTLKLI_					0	0	0		ENSG00000162695|ENST00000357650|SLC30A7	ENSG00000162695|ENST00000357650|SLC30A7	ENSG00000162695|ENST00000357650|SLC30A7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	503.8217651247978	2	503.320786	1004.62702	0.57346	0.00028863	-0.95629	-0.00048132	-0.38283	-0.00019269	503.82196556068214	57.659	0.056026	59.077	59.045	59.101	1.4181					6	4	2	0	0	0	0.046149	1	24180	24180		51.63	23.143	1	6658000			41707	3640	20385	20474	48279	48279					0.12488978522173966
VYVKHSISF	9	Unmodified	_VYVKHSISF_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	360.5352050662041	3	360.53432	1078.58113	0.19121	6.8937E-05	1.0444	0.00037654	1.2356	0.00044547	360.5347001006585	24.198	0.55606	25.439	25.238	25.794	1.241					47	17	4	0	0	0	0.071837	2	10134	10085;10134		59.368	24.436	1	18526000			41708	4724	20386	20475	48280;48281	48281					0.04498333339938654
VYVKHSISF	9	Unmodified	_VYVKHSISF_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2987548708916	2	540.297842	1078.58113	1.4663	0.00079226	1.2009	0.00064885	2.6672	0.0014411	540.2982350008609	24.198	0.34076	25.439	25.268	25.609	1.241					26	10	4	0	0	0	0.040715	1	10110	10110		72.968	29.11	1	2785900			41709	4724	20386	20475	48282	48282					0.04498333339938654
VYVKHSISF	9	Unmodified	_VYVKHSISF_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	360.5344726443291	3	360.53432	1078.58113	0.18138	6.5394E-05	0.23905	8.6186E-05	0.42043	0.00015158	360.5344091967281	23.803	0.63243	25.488	25.243	25.875	1.6845					53	20	4	0	0	0	0.071837	3	9928	9887;9928;9971		59.368	34.377	1	11925000			41710	4724	20386	20475	48283;48284;48285	48284					0.04498333339938654
VYVKHSISF	9	Unmodified	_VYVKHSISF_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1;AP3M1|p.G307Rfs*5|1|0.04|ENSG00000185009|chr10:74126240-74126241|-/CT|frameshift_variant	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.2986938357353	2	540.297842	1078.58113	0.64818	0.00035021	0.75205	0.00040633	1.4002	0.00075654	540.297936849297	23.757	0.35717	25.423	25.286	25.643	1.6663					26	11	3	0	0	0	0.034867	2	9944	9899;9944		78.728	20.049	1	2541700			41711	4724	20386	20475	48286;48287	48287					0.04498333339938654
VYVQHPITF	9	Unmodified	_VYVQHPITF_					0	0	0		nc|ENSG00000189067|Q99732-3|LITAF;ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF	nc|ENSG00000189067|Q99732-3|LITAF	nc|ENSG00000189067|Q99732-3|LITAF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.3002197146416	2	552.297842	1102.58113	2.1636	0.001195	-1.6027	-0.00088519	0.56089	0.00030978	552.2984437658906	39.485	0.32072	40.796	40.586	40.907	1.3102					23	10	3	0	0	0	0.037098	1	16559	16559		78.728	40.754	1	2794500			41712	4894	20387	20476	48288	48288					0.033943333399292897
VYVQHPITF	9	Unmodified	_VYVQHPITF_					0	0	0		nc|ENSG00000189067|Q99732-3|LITAF;ENSG00000189067|ENST00000622633|LITAF;nc|ENSG00000189067|Q99732-2|LITAF	nc|ENSG00000189067|Q99732-3|LITAF	nc|ENSG00000189067|Q99732-3|LITAF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2998535037041	2	552.297842	1102.58113	1.2833	0.00070879	-0.67557	-0.00037312	0.60777	0.00033567	552.298642948532	38.964	0.29066	40.801	40.622	40.913	1.8366					18	8	3	0	0	0	0.037098	2	16307	16307;16359		78.728	36.633	1	2611100			41713	4894	20387	20476	48289;48290	48289					0.033943333399292897
VYVQLWRR	8	Unmodified	_VYVQLWRR_					0	0	0		ENST00000510786.1_1_4:164449902-164477015:-|nuORF;nc|ENSG00000145416|Q8TCQ1-2|MARCHF1;nc|ENSG00000145416|Q8TCQ1|MARCHF1;ENSG00000145416|ENST00000514618|MARCHF1	ENST00000510786.1_1_4:164449902-164477015:-|nuORF	ENST00000510786.1_1_4:164449902-164477015:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3267089724541	2	560.324725	1118.6349	1.8018	0.0010096	2.2448	0.0012578	4.0467	0.0022675	560.3266331474794	39.915	0.61533	41.777	41.309	41.925	1.8624					25	19	2	0	0	0	0.76103	1	16724	16724		24.674	3.1369	1	1446400			41714	3110	20388	20477	48291	48291					0.08032550562325014
VYVQNVVKL	9	Unmodified	_VYVQNVVKL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3231078982353	2	531.321317	1060.62808	1.8554	0.00098582	2.0281	0.0010776	3.8835	0.0020634	531.3222840446531	42.44	0.35055	43.78	43.602	43.953	1.3399					34	10	4	0	0	0	0.0092758	3	17805	17760;17805;17844		108	59.89	1	18076000			41715	779	20389	20478	48292;48293;48294	48293					0.10019192891104467
VYVQNVVKL	9	Unmodified	_VYVQNVVKL_					0	0	0		nc|ENSG00000065000|O14617-4|AP3D1;nc|ENSG00000065000|O14617|AP3D1;ENSG00000065000|ENST00000643116|AP3D1;nc|ENSG00000065000|O14617-3|AP3D1;nc|ENSG00000065000|O14617-2|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	nc|ENSG00000065000|O14617-4|AP3D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.3248779177666	2	531.321317	1060.62808	1.9656	0.0010443	1.2587	0.0006688	3.2243	0.0017131	531.3218465591335	41.889	0.31466	43.781	43.637	43.952	1.8927					29	9	4	0	0	0	0.00020592	2	17532	17532;17569		141.83	70.693	1	16321000			41716	779	20389	20478	48295;48296	48295					0.10019192891104467
VYVVGTAHF	9	Unmodified	_VYVVGTAHF_					0	0	0		ENST00000463233.1_1_22:50624392-50636456:+|nuORF;nc|ENSG00000170638|Q9H4I3-2|TRABD;ENSG00000170638|ENST00000380909|TRABD	ENST00000463233.1_1_22:50624392-50636456:+|nuORF	ENST00000463233.1_1_22:50624392-50636456:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7619506716728	2	496.763635	991.512717	0.76114	0.00037811	-1.9725	-0.00097988	-1.2114	-0.00060178	496.76302122458355	37.57	0.19501	38.854	38.73	38.925	1.284					12	9	2	0	0	0	0.12174	1	15779	15779		42.095	9.7891	1	1377900			41717	4157	20390	20479	48297	48297					0.01662088760087954
VYWEGYVRF	9	Unmodified	_VYWEGYVRF_					0	0	0		ENSG00000175606|ENST00000312184|TMEM70;ENST00000520167.5_1_8:74888148-74891330:+|nuORF;nc|ENSG00000175606|Q9BUB7-3|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	609.8018066287041	2	609.800749	1217.58694	2.4591	0.0014996	2.1344	0.0013015	4.5935	0.0028011	609.8020886759932	63.401	0.30952	64.814	64.626	64.936	1.4134					20	9	3	0	0	0	0.063746	1	26580	26580		62.573	33.491	1	2054900			41718	4380	20391	20480	48298	48298					-0.0131456814840476
VYWEGYVRF	9	Unmodified	_VYWEGYVRF_					0	0	0		ENSG00000175606|ENST00000312184|TMEM70;ENST00000520167.5_1_8:74888148-74891330:+|nuORF;nc|ENSG00000175606|Q9BUB7-3|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	ENSG00000175606|ENST00000312184|TMEM70	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	609.8013183474541	2	609.800749	1217.58694	2.4733	0.0015082	1.2459	0.00075972	3.7191	0.0022679	609.8014154607237	62.822	0.31098	64.766	64.564	64.875	1.9444					17	9	2	0	0	0	0.044893	1	26344	26344		71.922	49.186	1	1656900			41719	4380	20391	20480	48299	48299					-0.0131456814840476
VYWKIYNSI	9	Unmodified	_VYWKIYNSI_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.3200561404228	2	593.318774	1184.623	1.7342	0.001029	0.073461	4.3586E-05	1.8077	0.0010725	593.318143213493	54.546	0.56428	55.95	55.707	56.272	1.4048					45	17	4	0	0	0	0.00023236	3	22816	22773;22816;22855		140.63	87.87	1	9117300			41720	1926	20392	20481	48300;48301;48302	48301					0.03806889028464866
VYWKIYNSI	9	Unmodified	_VYWKIYNSI_					0	0	0		ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	ENSG00000115524|ENST00000335508|SF3B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.3198119997978	2	593.318774	1184.623	1.6585	0.00098404	-0.56875	-0.00033745	1.0898	0.00064659	593.3181247354811	54.043	0.50426	56.012	55.751	56.255	1.9684					44	15	4	0	0	0	2.7126E-05	4	22620	22570;22620;22658;22701		165.72	100.49	1	6725600			41721	1926	20392	20481	48303;48304;48305;48306	48304					0.03806889028464866
VYWTQLNMF	9	Unmodified	_VYWTQLNMF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2;RPN2|p.Q601E|1|0.03|ENSG00000118705|chr20:37236627-37236627|C/G|missense_variant	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.2911254763603	2	601.289159	1200.56377	2.5	0.0015032	1.1731	0.00070538	3.6731	0.0022086	601.2891135956021	83.153	0.34109	84.341	84.142	84.484	1.1879					25	10	3	0	0	0	0.19075	2	34927	34877;34927		34.102	26.192	1	1635600			41722	2045	20393	20482	48307;48308	48308					-0.028493302573679102
VYWTQLNMF	9	Unmodified	_VYWTQLNMF_					0	0	0		ENSG00000118705|ENST00000237530|RPN2;nc|ENSG00000118705|P04844-2|RPN2;RPN2|p.Q601E|1|0.03|ENSG00000118705|chr20:37236627-37236627|C/G|missense_variant	ENSG00000118705|ENST00000237530|RPN2	ENSG00000118705|ENST00000237530|RPN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.2902709841728	2	601.289159	1200.56377	2.8202	0.0016957	-1.714	-0.0010306	1.1061	0.0006651	601.2881385658379	82.635	0.27377	84.305	84.173	84.447	1.67					16	8	2	0	0	0	0.15478	1	34680	34680		38.151	25.911	1	1384500			41723	2045	20393	20482	48309	48309					-0.028493302573679102
VYYIISKV	8	Unmodified	_VYYIISKV_					0	0	0			REV__nc|ENSG00000197136|Q9H6A9-3|PCNX3	REV__nc|ENSG00000197136|Q9H6A9-3|PCNX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	493.2643615603447	2	492.791861	983.569169	1.8866	0.00092969	-3.7136	-0.00183	-1.827	-0.00090033	492.7899129113116	54.126	0.61781	56.094	55.877	56.495	1.9684					25	19	3	0	0	0	2.3239	1	22809	22809		6.3541	0	1	1702500	+		41724	11659	20394	20483	48310	48310					0.07672716596766804
VYYPELFVW	9	Unmodified	_VYYPELFVW_					0	0	0		chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP;ENSG00000134986|ENST00000257435|NREP;chr5:111757179-111757320|402|14.16|0.5|4.81|-|ENST00000446294|NREP,NREP;chr5:111757173-111757320|406|17.88|0.16|6.85|-|ENST00000453526|NREP,NREP;ENST00000507742.5_1_5:111066620-111092910:-|nuORF;nc|ENSG00000134986|Q16612-2|NREP	chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP	chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.3127319216728	2	608.307875	1214.6012	3.8485	0.002341	0.89855	0.00054659	4.747	0.0028876	608.3084122125027	96.165	0.21695	96.586	96.478	96.695	0.4212					19	6	4	0	0	0	0.076627	1	40458	40458		57.471	23.369	1	15808000			41725	265	20395	20484	48311	48311					0.0024808427988318726
VYYPELFVW	9	Unmodified	_VYYPELFVW_					0	0	0		chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP;ENSG00000134986|ENST00000257435|NREP;chr5:111757179-111757320|402|14.16|0.5|4.81|-|ENST00000446294|NREP,NREP;chr5:111757173-111757320|406|17.88|0.16|6.85|-|ENST00000453526|NREP,NREP;ENST00000507742.5_1_5:111066620-111092910:-|nuORF;nc|ENSG00000134986|Q16612-2|NREP	chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP	chr5:111757179-111757945|421|20.29|0.46|5.46|-|ENST00000509979|NREP,NREP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3113281130791	2	608.307875	1214.6012	3.2468	0.0019751	2.7898	0.001697	6.0366	0.0036721	608.3097662883484	96.011	0.33661	96.413	96.272	96.609	0.40208					20	10	3	0	0	0	0.09539	2	40404	40368;40404		50.855	22.368	1	14720000			41726	265	20395	20484	48312;48313	48313					0.0024808427988318726
VYYRRGLALK	10	Unmodified	_VYYRRGLALK_					0	0	0		ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	ENSG00000117133|ENST00000370654|RPF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	413.5847350955009	3	413.583785	1237.72953	1.1419	0.00047226	-0.31653	-0.00013091	0.82534	0.00034135	413.58377032058286	23.748	1.3442	24.989	24.684	26.028	1.241					115	43	4	0	0	0	0.85124	2	10308	9856;10308		3.5871	0	1	2267800			41727	1997	20396	20485	48314;48315	48315					0.12017064313636183
VYYRVGARF	9	Unmodified	_VYYRVGARF_					0	0	0			REV__ENSG00000211456|ENST00000389061|SACM1L	REV__ENSG00000211456|ENST00000389061|SACM1L	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	565.8873779177666	2	565.808908	1129.60326	2.5579	0.0014473	2.282	0.0012912	4.8399	0.0027385	565.8110335843287	64.009	0.41501	65.417	65.207	65.622	1.4071					22	12	2	0	0	0	0.11333	1	26826	26826		13.508	4.9146	1	1632800	+		41728	11831	20397	20486	48316	48316					0.043645578083669534
VYYVEEGLRQF	11	Unmodified	_VYYVEEGLRQF_					0	0	0		ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	ENSG00000188582|ENST00000340634|PAQR9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	702.3541137576103	2	701.853709	1401.69287	1.4728	0.0010337	-0.75983	-0.00053329	0.71298	0.0005004	702.354382307489	61.359	0.34871	63.316	63.148	63.497	1.9571					30	10	4	0	0	0	0.46674	1	25782	25782		24.991	9.7425	1	2012100			41729	4869	20398	20487	48317	48317					0.008087229064130952
WAALRGVPL	9	Unmodified	_WAALRGVPL_					0	0	0		sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1;sp|P16763|UL27_HCMVAProteinUL27OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL27PE=3SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.2000610232353	3	328.199272	981.575986	0.68792	0.00022577	1.1276	0.00037008	1.8155	0.00059585	328.19957558819067	33.324	1.3482	33.621	33.307	34.656	0.29701					126	44	5	0	0	0	0.76456	1	13960	13960		2.7352	0.45242	1	81250000			41730	15995	20399	20488	48318	48318					0.08446074267999393
WAALRGVPL	9	Unmodified	_WAALRGVPL_					0	0	0		sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1;sp|P16763|UL27_HCMVAProteinUL27OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL27PE=3SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1995727419853	3	328.199272	981.575986	-0.59112	-0.00019401	2.0316	0.00066675	1.4404	0.00047275	328.1999573456671	31.681	0.39882	32.963	32.773	33.172	1.2813					51	12	5	0	0	0	0.76456	1	13335	13335		2.7352	0	1	84296000			41731	15995	20399	20488	48319	48319					0.08446074267999393
WAALRGVPL	9	Unmodified	_WAALRGVPL_					0	0	0		sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1;sp|P16763|UL27_HCMVAProteinUL27OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL27PE=3SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	328.1994201540947	3	328.199272	981.575986	-0.63489	-0.00020837	1.2428	0.00040788	0.60791	0.00019951	328.19963786516615	32.144	0.68638	33.426	33.141	33.827	1.2813					82	23	5	0	0	0	0.76456	1	13464	13464		2.7352	0	1	112710000			41732	15995	20399	20488	48320	48320					0.08446074267999393
WAALRGVPL	9	Unmodified	_WAALRGVPL_					0	0	0		sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1;sp|P16763|UL27_HCMVAProteinUL27OS=Humancytomegalovirus(strainAD169)OX=10360GN=UL27PE=3SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	sp|Q6SWA4|UL27_HCMVMProteinUL27OS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL27PE=1SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1991760134697	3	328.199272	981.575986	0.27459	9.0119E-05	0.25679	8.4279E-05	0.53138	0.0001744	328.1993172249382	31.551	0.7445	33.375	33.103	33.848	1.8246					84	27	5	0	0	0	0.76456	2	13144	13144;13190		2.7352	0	1	106150000			41733	15995	20399	20488	48321;48322	48321					0.08446074267999393
WAAVIGRLP	9	Unmodified	_WAAVIGRLP_					0	0	0			REV__chr16:765303-765691|306|34.36|0.08|8.78|+|0|MSLN,MSLN|1	REV__chr16:765303-765691|306|34.36|0.08|8.78|+|0|MSLN,MSLN|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1993286013603	3	328.199272	981.575986	0.27459	9.0119E-05	0.25679	8.4279E-05	0.53138	0.0001744	328.1993172249382	31.551	0.7445	33.375	33.103	33.848	1.8246					84	27	5	0	0	0	0.76456	1	13274	13274		2.7352	0	1	106150000	+		41734	8269	20400	20489	48323	48323					0.08446074267999393
WAEMYRNRYWK	11	Unmodified	_WAEMYRNRYWK_					0	0	0		ENSG00000162482|ENST00000361640|AKR7A3	ENSG00000162482|ENST00000361640|AKR7A3	ENSG00000162482|ENST00000361640|AKR7A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	801.8854858279228	2	801.885352	1601.75615	2.3418	0.0018779	-3.1261	-0.0025068	-0.7843	-0.00062891	801.8831310182152	72.434	1.3768	74.244	73.861	75.238	1.8101					113	43	4	0	0	0	1.0084	1	30395	30395		3.2813	0.54611	1	9168800			41735	3622	20401	20490	48324	48324					-0.02065614857338005
WAKQKKEI	8	Unmodified	_WAKQKKEI_					0	0	0			REV__ENST00000242848.8_2_13:46542915-46543014:-|nuORF	REV__ENST00000242848.8_2_13:46542915-46543014:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	344.2056762576103	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.822	1	16.648	16.148	17.148	0.82643								0	0	0	1.0178	1	6577	6577		0.45834	0	1		+		41736	12125	20402	20491	48325	48325					0.08350039576839663
WAKVLTLRY	9	Unmodified	_WAKVLTLRY_					0	0	0			REV__ENSG00000198874|ENST00000359626|TYW1	REV__ENSG00000198874|ENST00000359626|TYW1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.3459960818291	2	575.342584	1148.67061	2.096	0.0012059	3.5772	0.0020581	5.6732	0.003264	575.3446165773247	83.123	0.55095	83.123	82.922	83.473	0					31	17	2	0	0	0	0.85019	1	34631	34631		0.52476	0	1	1539800	+		41737	11750	20403	20492	48326	48326					0.10222588019314571
WALGGRVKHLP	11	Unmodified	_WALGGRVKHLP_					0	0	0			REV__ENST00000528927.5_1_11:431754-441926:-|nuORF	REV__ENST00000528927.5_1_11:431754-441926:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	4	309.185829	1232.71421	-0.099361	-3.0721E-05	-0.61519	-0.00019021	-0.71455	-0.00022093	309.1857337254399	24.214	1.3946	25.899	25.118	26.513	1.6845					105	46	4	0	0	0	0.14606	1	9918	9918		3.0723	0.22898	1	1117700	+		41738	13690	20404	20493	48327	48327					0.10716197516467219
WALKLLWP	8	Unmodified	_WALKLLWP_					0	0	0			REV__MFSD3|p.L154Tfs*64|1|0.17|ENSG00000167700|chr8:144509789-144509823|CGCGCTGCTGGCGCTGCTGCCCACCTTCTCGTGGC/-|frameshift_variant	REV__MFSD3|p.L154Tfs*64|1|0.17|ENSG00000167700|chr8:144509789-144509823|CGCGCTGCTGGCGCTGCTGCCCACCTTCTCGTGGC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	342.8755370974541	3	342.876018	1025.60622	-1.7076	-0.0005855	-0.052901	-1.8138E-05	-1.7605	-0.00060363	342.8758837311366	34.585	0.49891	34.585	34.37	34.869	0					50	15	4	0	0	0	0.89152	1	14468	14468		1.6526	0.17072	1	9353600	+		41739	10874	20405	20494	48328	48328					0.0944443293317363
WALPLLLLLLR	11	Unmodified	_WALPLLLLLLR_					0	0	0		nc|ENSG00000149177|Q12913-3|PTPRJ;ENSG00000149177|ENST00000418331|PTPRJ;nc|ENSG00000149177|Q12913-2|PTPRJ	nc|ENSG00000149177|Q12913-3|PTPRJ	nc|ENSG00000149177|Q12913-3|PTPRJ	MSMS	GG20161007_CRH_Patient100_W632_01	3	660.9442016482353	2	660.941934	1319.86931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.45	1	45.816	45.316	46.316	1.3653								0	0	0	0.63775	1	18632	18632		0	0	1				41740	3231	20406	20495	48329	48329					0.2221742859819642
WAMYHVCSK	9	Unmodified	_WAMYHVCSK_					0	0	0		ENSG00000203995|ENST00000371528|ZYG11A;nc|ENSG00000203995|Q6WRX3-2|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	376.0749694705009	3	375.505379	1123.49431	-1.3989	-0.00052529	1.8399	0.00069089	0.44102	0.0001656	375.5060733013699	19.729	2.3298	19.729	19.327	21.656	0					108	74	2	0	0	0	0.11901	1	8710	8710		1.0715	0.83562	1	820120			41741	5120	20407	20496	48330	48330					-0.0625011247780094
WAMYHVCSK	9	Unmodified	_WAMYHVCSK_					0	0	0		ENSG00000203995|ENST00000371528|ZYG11A;nc|ENSG00000203995|Q6WRX3-2|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	ENSG00000203995|ENST00000371528|ZYG11A	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	375.505379	1123.49431	0.43873	0.00016474	0.28858	0.00010836	0.72731	0.00027311	375.5053625254156	19.425	1.0997	19.618	19.387	20.487	0.19342	-0.055598	-0.0010371	NaN	1.0715	51	35	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	532340			41742	5120	20407	20496							-0.0625011247780094
WARWRWRWRRK	11	Unmodified	_WARWRWRWRRK_					0	0	0			REV__chr7:128031470-128074502|87|23.48|0.05|8.77|+|1|None,SND1|2	REV__chr7:128031470-128074502|87|23.48|0.05|8.77|+|1|None,SND1|2	MSMS	GG20161007_CRH_Patient100_W632_01	3	872.3134033083916	2	871.990001	1741.96545	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.898	1	98.125	97.625	98.625	0.22776								0	0	0	0.63775	1	41201	41201		0.30703	0.30703	1		+		41743	8336	20408	20497	48331	48331					0.12414434001448171
WASSPHWY	8	Unmodified	_WASSPHWY_					0	0	0			REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1573364138603	3	345.155732	1032.44537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.527	1	30.81	30.31	31.31	1.2825								0	0	0	1.0178	1	12388	12388		1.6526	0.58116	1		+		41744	12079	20409	20498	48332	48332					-0.06955941450860337
WASSPHWY	8	Unmodified	_WASSPHWY_					0	0	0			REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1567565798759	3	345.155732	1032.44537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.65	1	30.932	30.432	31.432	1.2825								0	0	0	1.0178	1	12440	12440		1.6526	0.58116	1		+		41745	12079	20409	20498	48333	48333					-0.06955941450860337
WASSPHWY	8	Unmodified	_WASSPHWY_					0	0	0			REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	REV__ENST00000219334.9_1_16:68393500-68393875:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	345.1572448611259	3	345.155732	1032.44537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.855	1	31.138	30.638	31.638	1.2825								0	0	0	1.0178	1	12527	12527		1.6526	0.58116	1		+		41746	12079	20409	20498	48334	48334					-0.06955941450860337
WAYPRQVFI	9	Unmodified	_WAYPRQVFI_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK;ENST00000505222.5_1_6:82901346-82950269:-|nuORF	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.3183471560478	2	590.319109	1178.62366	0.70686	0.00041727	-0.44677	-0.00026374	0.26009	0.00015354	590.8197347113402	58.227	0.3437	59.645	59.44	59.784	1.4181					19	11	2	0	0	0	0.006164	2	24414	24376;24414		117.6	81.472	1	5638200			41747	491	20410	20499	48335;48336	48336					0.04149728468178182
WAYPRQVFI	9	Unmodified	_WAYPRQVFI_					0	0	0		nc|ENSG00000005700|Q9P2D0-2|IBTK;ENST00000369751.2_1_6:82901346-82950269:-|nuORF;IBTK|p.P1251Qfs*12|1|0.05|ENSG00000005700|chr6:82173412-82173412|G/-|frameshift_variant;ENSG00000005700|ENST00000306270|IBTK;ENST00000505222.5_1_6:82901346-82950269:-|nuORF	nc|ENSG00000005700|Q9P2D0-2|IBTK	nc|ENSG00000005700|Q9P2D0-2|IBTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.3195678591728	2	590.319109	1178.62366	0.37249	0.00021989	0.30948	0.00018269	0.68198	0.00040258	590.3190586278292	57.628	0.28265	59.597	59.447	59.729	1.969					20	13	2	0	0	0	0.006164	2	24183	24146;24183		117.6	79.423	1	4368100			41748	491	20410	20499	48337;48338	48338					0.04149728468178182
WCCCCCLWCP	10	Unmodified	_WCCCCCLWCP_					0	0	0			REV__CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	REV__CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1880981326103	2	610.187839	1218.36113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.289	1	45.289	44.789	45.789	0								0	0	0	0.66264	1	18950	18950		0	0	1		+		41749	8364	20411	20500	48339	48339					-0.23932082513465502
WCCCCCLWCP	10	Unmodified	_WCCCCCLWCP_					0	0	0			REV__CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	REV__CNDP1|p.R7Efs*29|1|0.16|ENSG00000150656|chr18:74534683-74534683|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	610.1878539919853	2	610.187839	1218.36113	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.004	1	54.004	53.504	54.504	0								0	0	0	0.66264	1	22513	22513		0	0	1		+		41750	8364	20411	20500	48340	48340					-0.23932082513465502
WCHFLFGV	8	Unmodified	_WCHFLFGV_					0	0	0			REV__ENSG00000180043|ENST00000424985|GARIN5B	REV__ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	504.7437621951103	2	504.741648	1007.46874	2.9845	0.0015064	2.4803	0.0012519	5.4648	0.0027583	504.74221710681195	80.711	0.23902	81.945	81.863	82.102	1.2332					12	7	2	0	0	0	0.88409	1	33889	33889		6.3541	1.1234	1	772550	+		41751	11287	20412	20501	48341	48341					-0.03469218937891583
WCHFLFGV	8	Unmodified	_WCHFLFGV_					0	0	0			REV__ENSG00000180043|ENST00000424985|GARIN5B	REV__ENSG00000180043|ENST00000424985|GARIN5B	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	504.741648	1007.46874	2.9845	0.0015064	2.4803	0.0012519	5.4648	0.0027583	504.74221710681195	80.711	0.23902	81.945	81.863	82.102	1.2332	0.0076539	2.1547E-05	NaN	6.3541	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	772550	+		41752	11287	20412	20501							-0.03469218937891583
WCRRRWRWRLT	11	Unmodified	_WCRRRWRWRLT_					0	0	0		chr12:123762550-123764343|330|17.95|0.82|4.45|+|0|DNAH10,None|1	chr12:123762550-123764343|330|17.95|0.82|4.45|+|0|DNAH10,None|1	chr12:123762550-123764343|330|17.95|0.82|4.45|+|0|DNAH10,None|1	MSMS	GG20161007_CRH_Patient100_A02_01	1	837.9569579958916	2	837.954769	1673.89499	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.78	1	112.78	112.28	113.28	0								0	0	0	0.63775	1	48747	48747		0	0	1				41753	189	20413	20502	48342	48342					0.08499392621502011
WDCVCAYM	8	Unmodified	_WDCVCAYM_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	990.3514282107353	1	990.351807	989.34453	0.27314	0.00027051	-1.3298	-0.001317	-1.0567	-0.0010465	990.3505743992527	10.097	1.041	10.175	9.8285	10.87	0.077971					47	33	2	0	0	0	0.89176	1	4143	4143		0.79363	0	1	794930	+		41754	8801	20414	20503	48343	48343					-0.15056800811896665
WDCVCAYM	8	Unmodified	_WDCVCAYM_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	990.3533203005791	1	990.351807	989.34453	0.27294	0.0002703	-0.82081	-0.00081289	-0.54788	-0.00054259	990.3515401413373	11.047	0.58301	11.13	10.69	11.273	0.082325					31	19	2	0	0	0	0.89176	1	4588	4588		0.79363	0	1	1048300	+		41755	8801	20414	20503	48344	48344					-0.15056800811896665
WDCVCAYM	8	Unmodified	_WDCVCAYM_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	990.8554565310478	1	990.351807	989.34453	0.27334	0.00027071	-0.12348	-0.00012229	0.14986	0.00014842	990.3516404192802	11.606	0.18619	11.688	11.55	11.736	0.082325					9	5	2	0	0	0	2.3239	1	4813	4813		2.5775	0.73324	1	2093700	+		41756	8801	20414	20503	48345	48345					-0.15056800811896665
WDCVCAYM	8	Unmodified	_WDCVCAYM_					0	0	0			REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	REV__nc|ENSG00000079691|Q5VZK9-3|CARMIL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	990.3507568240166	1	990.351807	989.34453	0.56936	0.00056387	-2.345	-0.0023224	-1.7756	-0.0017585	990.3492069846972	10.203	0.46797	10.947	10.602	11.07	0.74462					27	14	2	0	0	0	0.89008	1	4250	4250		2.5775	0.27475	1	3102500	+		41757	8801	20414	20503	48346	48346					-0.15056800811896665
WDFPQPLI	8	Unmodified	_WDFPQPLI_					0	0	0		ENSG00000166535|ENST00000299698|A2ML1;nc|ENSG00000166535|A8K2U0-2|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	ENSG00000166535|ENST00000299698|A2ML1	MSMS	GG20161007_CRH_Patient100_A02_01	1	339.1796752810478	3	339.179766	1014.51747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.053	1	93.053	92.553	93.553	0								0	0	0	1.0178	1	38894	38894		0.40072	0	1				41758	3911	20415	20504	48347	48347					0.010789729028601869
WDGQVGMVSGF	11	Unmodified	_WDGQVGMVSGF_					0	0	0		URB2|p.L733F|1|0.18|ENSG00000135763|chr1:229636810-229636810|C/T|missense_variant	URB2|p.L733F|1|0.18|ENSG00000135763|chr1:229636810-229636810|C/T|missense_variant	URB2|p.L733F|1|0.18|ENSG00000135763|chr1:229636810-229636810|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.7661010622978	2	591.766049	1181.51754	1.3197	0.00078096	0.31588	0.00018693	1.6356	0.00096788	591.7663830015183	38.798	0.41914	40.634	40.398	40.817	1.8366					29	12	3	0	0	0	0.85967	1	16279	16279		12.241	0.60036	1	1710700			41759	17351	20416	20505	48348	48348					-0.0659539515945653
WDIRQCWH	8	Unmodified	_WDIRQCWH_					0	0	0		nc|ENSG00000139624|Q8N5B7-2|CERS5;ENSG00000139624|ENST00000317551|CERS5	nc|ENSG00000139624|Q8N5B7-2|CERS5	nc|ENSG00000139624|Q8N5B7-2|CERS5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	381.5107299685478	3	381.843271	1142.50798	0.056778	2.168E-05	2.3309	0.00089004	2.3877	0.00091172	381.8441684454958	6.6199	0.41157	6.6998	6.4645	6.8761	0.079923					47	26	2	0	0	0	2.3239	1	2755	2755		6.7232	0.51738	1	571270			41760	2883	20417	20506	48349	48349					-0.05757118654310034
WDITYRFQ	8	Unmodified	_WDITYRFQ_					0	0	0		AVPR1B|p.Y112Tfs*17|1|0.56|ENSG00000198049|chr1:206116557-206116557|A/-|frameshift_variant;ENSG00000198049|ENST00000367126|AVPR1B	AVPR1B|p.Y112Tfs*17|1|0.56|ENSG00000198049|chr1:206116557-206116557|A/-|frameshift_variant	AVPR1B|p.Y112Tfs*17|1|0.56|ENSG00000198049|chr1:206116557-206116557|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	564.2776977419853	2	564.777274	1127.53999	2.0394	0.0011518	0.32601	0.00018412	2.3655	0.001336	564.7781205912493	79.034	0.24683	80.769	80.567	80.814	1.735					10	7	2	0	0	0	2.3239	1	33143	33143		12.532	4.6214	1	1258500			41761	97	20418	20507	48350	48350					-0.01867427699539803
WDLRPVFH	8	Unmodified	_WDLRPVFH_					0	0	0			REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	REV__tr|A0A553STQ8|A0A553STQ8_NIACIROKfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_05580PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	357.1908141970634	3	357.190776	1068.5505	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.803	1	66.127	65.627	66.627	0.32465								0	0	0	1.0178	1	27552	27552		0.45834	0	1		+		41762	15255	20419	20508	48351	48351					0.018965997455552497
WDRKHRRLIRK	11	Unmodified	_WDRKHRRLIRK_					0	0	0			REV__nc|ENSG00000062038|P22223-2|CDH3	REV__nc|ENSG00000062038|P22223-2|CDH3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	391.2847167849541	4	391.741834	1562.93823	0.016551	6.4836E-06	3.2127	0.0012585	3.2292	0.001265	391.99491663952654	73.743	0.67709	73.743	73.433	74.11	0					29	21	2	0	0	0	0.14606	1	30714	30714		0	0	1	386220	+		41763	8654	20420	20509	48352	48352					0.1792790567042175
WDRKHRRLIRK	11	Unmodified	_WDRKHRRLIRK_					0	0	0			REV__nc|ENSG00000062038|P22223-2|CDH3	REV__nc|ENSG00000062038|P22223-2|CDH3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	521.3812133669853	3	521.986687	1562.93823	2.5159	0.0013133	-1.1427	-0.00059647	1.3732	0.00071679	521.9854754613423	90.369	0.90642	90.369	89.714	90.621	0					48	28	2	0	0	0	0.14606	1	37693	37693		0	0	1	698430	+		41764	8654	20420	20509	48353	48353					0.1792790567042175
WDSGFCAVNPK	11	Unmodified	_WDSGFCAVNPK_					0	0	0		ENST00000568763.1_1_16:30195026-30196791:+|nuORF;ENST00000569469.1_1_16:30195026-30198371:+|nuORF;ENST00000568982.5_1_16:30195026-30198313:+|nuORF;ENSG00000102879|ENST00000219150|CORO1A	ENST00000568763.1_1_16:30195026-30196791:+|nuORF	ENST00000568763.1_1_16:30195026-30196791:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	408.5228759646416	3	408.521974	1222.54409	0.50314	0.00020554	1.4135	0.00057745	1.9167	0.000783	408.52253899563016	15.389	0.34633	15.519	15.304	15.65	0.13022					22	10	3	0	0	0	0.98969	1	6414	6414		4.4062	1.0865	1	1276600			41765	1401	20421	20510	48354	48354					-0.058277062681554526
WDVLIARM	8	Unmodified	_WDVLIARM_					0	0	0			REV__ENSG00000157456|ENST00000288207|CCNB2	REV__ENSG00000157456|ENST00000288207|CCNB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1003.542468249798	1	1003.53935	1002.53207	2.8123	0.0028222	3.3404	0.0033522	6.1527	0.0061745	1003.5430846819412	86.486	0.22356	86.73	86.548	86.771	0.24387					10	7	2	0	0	0	0.83518	1	36146	36146		18.135	4.6271	1	1695900	+		41766	10539	20422	20511	48355	48355					0.0309072177934695
WDVLIARM	8	Unmodified	_WDVLIARM_					0	0	0			REV__ENSG00000157456|ENST00000288207|CCNB2	REV__ENSG00000157456|ENST00000288207|CCNB2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	1003.53935	1002.53207	2.8123	0.0028222	3.3404	0.0033522	6.1527	0.0061745	1003.5430846819412	86.486	0.22356	86.73	86.548	86.771	0.24387	0	0	NaN	18.135	10	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1695900	+		41767	10539	20422	20511							0.0309072177934695
WEAFRTFW	8	Unmodified	_WEAFRTFW_					0	0	0		ENSG00000081148|ENST00000193391|IMPG2	ENSG00000081148|ENST00000193391|IMPG2	ENSG00000081148|ENST00000193391|IMPG2	MSMS	GG20161007_CRH_Patient100_A02_01	1	571.7726928591728	2	571.774534	1141.53451	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.68	1	72.68	72.18	73.18	0								0	0	0	1.0178	1	30260	30260		2.3027	0.24298	1				41768	1015	20423	20512	48356	48356					-0.030591064913551236
WEARPRVLE	9	Unmodified	_WEARPRVLE_					0	0	0		nc|ENSG00000197415|Q14D04-3|VEPH1	nc|ENSG00000197415|Q14D04-3|VEPH1	nc|ENSG00000197415|Q14D04-3|VEPH1	MSMS	GG20161007_CRH_Patient100_W632_01	3	578.3183471560478	2	578.317097	1154.61964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.45	1	103.61	103.11	104.11	0.16445								0	0	0	0.42693	1	43610	43610		3.5965	0	1				41769	7964	20424	20513	48357	48357					0.04851638974469097
WEATRLTV	8	Unmodified	_WEATRLTV_					0	0	0		nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	nc|ENSG00000101654|O43148-2|RNMT	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	488.2358276247978	2	488.266542	974.51853	0.93534	0.0004567	-2.7741	-0.0013545	-1.8387	-0.00089778	488.26528971575124	70.889	0.1479	72.727	72.653	72.801	1.8378					6	4	2	0	0	0	2.3239	1	29751	29751		14.582	5.2343	1	419370			41770	7842	20425	20514	48358	48358					0.03025187271748564
WEDRNIEDQYK	11	Unmodified	_WEDRNIEDQYK_					0	0	0		ENST00000344893.4_1_19:11759178-11789136:+|nuORF	ENST00000344893.4_1_19:11759178-11789136:+|nuORF	ENST00000344893.4_1_19:11759178-11789136:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	499.2327453494072	3	499.231917	1494.67392	0.87627	0.00043746	0.70527	0.00035209	1.5815	0.00078956	499.2323807916259	24.657	0.67289	24.657	24.429	25.102	0					58	21	5	0	0	0	1.0362	1	10288	10288		1.3296	1.3296	1	8566800			41771	5960	20426	20515	48359	48359					-0.05362858455282549
WEHLYNRF	8	Unmodified	_WEHLYNRF_					0	0	0		ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	ENSG00000136878|ENST00000372429|USP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.7865478396416	2	582.78289	1163.55123	2.8333	0.0016512	2.8978	0.0016888	5.7311	0.00334	582.7848640985635	62.431	0.36791	63.845	63.649	64.017	1.4147					34	11	4	0	0	0	0.82039	1	26150	26150		19.439	3.2899	1	5350000			41772	2746	20427	20516	48360	48360					-0.024006056053849534
WEILILQLV	9	Unmodified	_WEILILQLV_					0	0	0		tr|A0A7D7A2V0|A0A7D7A2V0_9CLOTFlippaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18955PE=4SV=1	tr|A0A7D7A2V0|A0A7D7A2V0_9CLOTFlippaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18955PE=4SV=1	tr|A0A7D7A2V0|A0A7D7A2V0_9CLOTFlippaseOS=ClostridiumintestinaleOX=36845GN=HZF06_18955PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	376.2332641482353	3	376.23387	1125.67978	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.284	1	84.545	84.045	85.045	0.26083								0	0	0	0.42693	1	35251	35251		1.1933	0	1				41773	17264	20428	20517	48361	48361					0.12196936584973628
WEKVLLSKH	9	Unmodified	_WEKVLLSKH_					0	0	0			REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	380.5580932497978	3	380.557236	1138.64988	1.6697	0.00063541	-0.43169	-0.00016428	1.238	0.00047112	380.55704476388587	52.873	0.38842	53.196	53.021	53.409	0.32283					28	12	3	0	0	0	0.79386	1	22138	22138		3.5871	0.5148	1	3499600	+		41774	13780	20429	20518	48362	48362					0.08609997639678113
WEKVLLSKH	9	Unmodified	_WEKVLLSKH_					0	0	0			REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	380.5572692751884	3	380.557236	1138.64988	0.051164	1.9471E-05	0.11808	4.4936E-05	0.16924	6.4407E-05	380.5573472204203	51.666	0.39768	53.062	52.839	53.237	1.3966					21	13	2	0	0	0	0.83148	1	21646	21646		2.086	0.34373	1	2688100	+		41775	13780	20429	20518	48363	48363					0.08609997639678113
WEKVLLSKH	9	Unmodified	_WEKVLLSKH_					0	0	0			REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	380.557236	1138.64988	1.6697	0.00063541	-0.43169	-0.00016428	1.238	0.00047112	380.55704476388587	52.873	0.38842	53.196	53.021	53.409	0.32283	0.12829	-0.00031325	NaN	3.5871	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3499600	+		41776	13780	20429	20518							0.08609997639678113
WEKVLLSKH	9	Unmodified	_WEKVLLSKH_					0	0	0			REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	380.557236	1138.64988	0.051164	1.9471E-05	0.11808	4.4936E-05	0.16924	6.4407E-05	380.5573472204203	51.666	0.39768	53.062	52.839	53.237	1.3966	-0.0053055	0.00031441	NaN	3.5871	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2688100	+		41777	13780	20429	20518							0.08609997639678113
WEKVLLSKH	9	Unmodified	_WEKVLLSKH_					0	0	0			REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	REV__ENST00000540725.5_1_11:62622615-62622948:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	380.557236	1138.64988	-0.53483	-0.00020353	-0.1012	-3.8513E-05	-0.63603	-0.00024204	380.55731196757773	50.969	0.41609	52.945	52.697	53.113	1.9753	-0.12299	6.4057E-05	NaN	3.5871	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3553000	+		41778	13780	20429	20518							0.08609997639678113
WELNLYAQN	9	Unmodified	_WELNLYAQN_					0	0	0			REV__ENST00000470904.5_1_3:122176581-122178306:-|nuORF	REV__ENST00000470904.5_1_3:122176581-122178306:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.7821533083916	2	575.780013	1149.54547	2.2019	0.0012678	-0.41022	-0.0002362	1.7917	0.0010316	575.7799534651151	44.357	0.47591	46.316	46.1	46.576	1.9596					27	14	2	0	0	0	0.59203	1	18549	18549		11.64	0	1	923900	+		41779	13281	20430	20519	48364	48364					-0.023317489077271603
WELSTTYFTM	10	Unmodified	_WELSTTYFTM_					0	0	0		ENST00000419769.6_1_10:127430814-127452038:+|nuORF;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1	ENST00000419769.6_1_10:127430814-127452038:+|nuORF	ENST00000419769.6_1_10:127430814-127452038:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	639.7896606326103	2	639.789189	1277.56383	4.2442	0.0027154	-3.6781	-0.0023532	0.56606	0.00036216	639.7867930184675	90.092	0.41367	91.112	90.926	91.34	1.0199					22	12	2	0	0	0	0.57775	1	37918	37918		24.021	2.2739	1	1484700			41780	1615	20431	20520	48365	48365					-0.0638537504805754
WELSTTYFTM	10	Unmodified	_WELSTTYFTM_					0	0	0		ENST00000419769.6_1_10:127430814-127452038:+|nuORF;ENST00000481600.5_1_10:127417653-127452038:+|nuORF;ENST00000525091.5_1_10:127408310-127436620:+|nuORF;nc|ENSG00000107938|Q3B7T1-5|EDRF1;ENSG00000107938|ENST00000356792|EDRF1	ENST00000419769.6_1_10:127430814-127452038:+|nuORF	ENST00000419769.6_1_10:127430814-127452038:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	639.7900268435478	2	639.789189	1277.56383	4.0591	0.002597	-3.1855	-0.0020381	0.87362	0.00055894	639.787557867728	89.755	0.47768	91.159	90.891	91.368	1.4045					24	14	2	0	0	0	0.70618	1	37848	37848		18.146	1.0335	1	1917700			41781	1615	20431	20520	48366	48366					-0.0638537504805754
WERRAGLLEQP	11	Unmodified	_WERRAGLLEQP_					0	0	0		ENSG00000182327|ENST00000331264|GLTPD2	ENSG00000182327|ENST00000331264|GLTPD2	ENSG00000182327|ENST00000331264|GLTPD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	677.8657104372978	2	677.864943	1353.71533	3.6322	0.0024622	-0.11779	-7.9847E-05	3.5144	0.0023823	677.8659792351901	96.165	0.12444	96.586	96.509	96.633	0.4212					5	3	2	0	0	0	0.54794	1	40462	40462		22.658	11.834	1	2595900			41782	4613	20432	20521	48367	48367					0.052623670947014034
WEVDEQIDHYK	11	Unmodified	_WEVDEQIDHYK_					0	0	0		nc|ENSG00000251192|Q2M3X9-2|ZNF674;ENSG00000251192|ENST00000683375|ZNF674;nc|ENSG00000251192|Q2M3X9|ZNF674	nc|ENSG00000251192|Q2M3X9-2|ZNF674	nc|ENSG00000251192|Q2M3X9-2|ZNF674	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	487.8935424685478	3	487.893013	1460.65721	0.098124	4.7874E-05	1.5081	0.00073577	1.6062	0.00078365	487.8935177633813	11.876	0.40358	12.664	12.409	12.813	0.78751					32	12	4	0	0	0	1.0362	1	4979	4979		1.3296	0	1	1505500			41783	5383	20433	20522	48368	48368					-0.05469359341236668
WFACAQAR	8	Unmodified	_WFACAQAR_					0	0	0			REV__nc|ENSG00000087085|P22303-3|ACHE	REV__nc|ENSG00000087085|P22303-3|ACHE	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1964904665947	3	318.153445	951.438506	1.5097	0.00048033	-0.4142	-0.00013178	1.0955	0.00034855	318.1538008033674	56.337	0.40093	56.658	56.473	56.874	0.32103					15	13	2	0	0	0	2.3239	1	23548	23548		0.35063	0	1	1247300	+		41784	8865	20434	20523	48369	48369					-0.03915577603095244
WFCDPTERK	9	Unmodified	_WFCDPTERK_					0	0	0			REV__ENSG00000049247|ENST00000361696|UTS2	REV__ENSG00000049247|ENST00000361696|UTS2	MSMS	GG20161007_CRH_Patient100_W632_02	4	394.5173217654228	3	394.518453	1180.53353	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.409	1	29.183	28.683	29.683	1.7735								0	0	0	0.42693	1	11471	11471		0.26902	0	1		+		41785	8616	20435	20524	48370	48370					-0.04951688922574249
WFDNDNSTCYM	11	Unmodified	_WFDNDNSTCYM_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3;ENST00000577928.5_1_18:19263865-19284533:-|nuORF;ENST00000578270.5_1_18:19244077-19283696:-|nuORF;ENST00000579875.5_1_18:19244061-19284599:-|nuORF;ENST00000579982.1_1_18:19282269-19284734:-|nuORF	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MSMS	GG20161007_CRH_Patient100_A02_02	2	698.2526733279228	2	698.252645	1394.49074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.784	1	48.115	47.615	48.615	0.33034								0	0	0	0.63775	1	20042	20042		0.35063	0	1				41786	3493	20436	20525	48371	48371					-0.19072871832963756
WFDRPLAL	8	Unmodified	_WFDRPLAL_					0	0	0		tr|A0A7D6ZZ32|A0A7D6ZZ32_9CLOTProbableM18familyaminopeptidase2OS=ClostridiumintestinaleOX=36845GN=apeBPE=3SV=1	tr|A0A7D6ZZ32|A0A7D6ZZ32_9CLOTProbableM18familyaminopeptidase2OS=ClostridiumintestinaleOX=36845GN=apeBPE=3SV=1	tr|A0A7D6ZZ32|A0A7D6ZZ32_9CLOTProbableM18familyaminopeptidase2OS=ClostridiumintestinaleOX=36845GN=apeBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.2825195193291	2	509.279452	1016.54435	2.9137	0.0014839	2.8234	0.0014379	5.7371	0.0029218	509.2803116332825	76.548	0.37546	77.842	77.669	78.045	1.2938					25	11	3	0	0	0	0.41488	1	32132	32132		53.576	15.424	1	3632800			41787	17205	20437	20526	48372	48372					0.036740815140205996
WFFLISRLL	9	Unmodified	_WFFLISRLL_					0	0	0		ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	ENST00000471799.1_1_22:26886916-26887635:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8574706912041	2	597.855327	1193.6961	3.4736	0.0020767	0.94402	0.00056439	4.4176	0.0026411	597.8557675871057	73.822	2.6041	75.14	73.992	76.597	1.318					144	83	3	0	0	0	0.75267	1	30895	30895		5.2307	0.47466	1	2054400			41788	6744	20438	20527	48373	48373					0.10700062541741318
WFICHIKVKWR	11	Unmodified	_WFICHIKVKWR_					0	0	0		ENST00000330714.7_1_21:42733883-42733955:+|nuORF	ENST00000330714.7_1_21:42733883-42733955:+|nuORF	ENST00000330714.7_1_21:42733883-42733955:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.2484008669853	5	303.973932	1514.83328	-3.5683	-0.0010847	-0.059894	-1.8206E-05	-3.6282	-0.0011029	303.97293084489974	2.8575	0.13503	2.8575	2.7478	2.8829	0					5	4	2	0	0	0	0.14606	1	1159	1159		0	0	1	85418			41789	5888	20439	20528	48374	48374					0.09645648149648878
WFILIFTL	8	Unmodified	_WFILIFTL_					0	0	0			REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	526.7701904177666	2	526.812596	1051.61064	1.7327	0.00091281	-4.0481	-0.0021326	-2.3153	-0.0012198	526.8109277680783	69.094	0.21754	69.094	69.017	69.234	0					9	6	2	0	0	0	2.3239	1	28753	28753		5.7604	0	1	302400	+		41790	11777	20440	20529	48375	48375					0.08689897356089205
WFILIFTL	8	Unmodified	_WFILIFTL_					0	0	0			REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	526.812596	1051.61064	1.6956	0.00089324	-2.3563	-0.0012414	-0.6608	-0.00034812	527.3122862300092	68.539	0.18561	68.861	68.782	68.967	0.32223	0.0023028	0.0023908	NaN	5.7604	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	355550	+		41791	11777	20440	20529							0.08689897356089205
WFILIFTL	8	Unmodified	_WFILIFTL_					0	0	0			REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	REV__nc|ENSG00000204361|Q96DL1-3|NXPE2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	526.812596	1051.61064	1.5176	0.0007995	-6.099	-0.003213	-4.5814	-0.0024135	526.8092275093859	66.732	0.26781	68.621	68.497	68.764	1.8889	-0.23749	-0.0015526	NaN	5.7604	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	618300	+		41792	11777	20440	20529							0.08689897356089205
WFKGILIP	8	Unmodified	_WFKGILIP_					0	0	0		ENSG00000112578|ENST00000230340|BYSL	ENSG00000112578|ENST00000230340|BYSL	ENSG00000112578|ENST00000230340|BYSL	MSMS	GG20161007_CRH_Patient100_W632_01	3	325.2018615603447	3	325.200501	972.579674	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.28	109.78	110.78	0.16133								0	0	0	1.0178	1	47842	47842		0.45834	0	1				41793	1788	20441	20530	48376	48376					0.09228744041865866
WFKQRLAKWRR	11	Unmodified	_WFKQRLAKWRR_					0	0	0		ENST00000554144.5_1_4:57514888-57516908:-|nuORF;nc|ENSG00000171476|Q9BPY8|HOPX;ENSG00000171476|ENST00000420433|HOPX	ENST00000554144.5_1_4:57514888-57516908:-|nuORF	ENST00000554144.5_1_4:57514888-57516908:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	525.6450683474541	3	525.644149	1573.91062	2.8556	0.001501	0.59907	0.0003149	3.4546	0.0018159	525.6444826068988	93.902	0.86575	94.047	93.427	94.293	0.14493					38	26	2	0	0	0	1.0402	1	39093	39093		0.08335	0	1	630880			41794	4190	20442	20531	48377	48377					0.1466200241018214
WFLRITKKKKT	11	Unmodified	_WFLRITKKKKT_					0	0	0			REV__FHOD3|p.D1177Afs*10|1|0.13|ENSG00000134775|chr18:36747008-36747009|-/C|frameshift_variant	REV__FHOD3|p.D1177Afs*10|1|0.13|ENSG00000134775|chr18:36747008-36747009|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2535888552666	4	362.982961	1447.90274	1.531	0.00055574	1.4118	0.00051247	2.9428	0.0010682	362.9838335721319	79.192	0.31109	80.927	80.722	81.033	1.735					12	9	2	0	0	0	0.14606	1	33164	33164		0.094841	0	1	482740	+		41795	9918	20443	20532	48378	48378					0.19670430370047143
WFPPAARR	8	Unmodified	_WFPPAARR_					0	0	0			REV__chr2:113235503-113241551|140|39.01|0.58|6.07|-|2|PAX8,PAX8|1	REV__chr2:113235503-113241551|140|39.01|0.58|6.07|-|2|PAX8,PAX8|1	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1868469119072	3	334.187366	999.540269	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.68	1	104.74	104.24	105.24	0.056801								0	0	0	1.0178	1	44205	44205		0.45834	0	1		+		41796	8294	20444	20533	48379	48379					0.04048036810979738
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8893310427666	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.058	1	92.248	91.748	92.748	0.19042								0	0	0	0.42693	1	38550	38550		0.23584	0.076522	1		+		41797	9546	20445	20534	48380	48380					0.008538634428759906
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8888122439384	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	20.624	1	21.749	21.249	22.249	1.1254								0	0	0	0.42693	1	8597	8597		0.26902	0.1097	1		+		41798	9546	20445	20534	48381	48381					0.008538634428759906
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884765505791	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.15	1	85.338	84.838	85.838	1.1879								0	0	0	0.42693	1	35312	35312		0.23584	0.095952	1		+		41799	9546	20445	20534	48382	48382					0.008538634428759906
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8903076052666	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.417	1	92.399	91.899	92.899	0.98157								0	0	0	0.42693	1	38502	38502		0.23584	0.095952	1		+		41800	9546	20445	20534	48383	48383					0.008538634428759906
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8888732790947	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.612	1	20.06	19.56	20.56	1.448								0	0	0	0.42693	1	7740	7740		0.26902	0.1097	1		+		41801	9546	20445	20534	48384	48384					0.008538634428759906
WFQDFHRVR	9	Unmodified	_WFQDFHRVR_					0	0	0			REV__nc|ENSG00000119596|P49750-3|YLPM1	REV__nc|ENSG00000119596|P49750-3|YLPM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8896057009697	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.115	1	93.442	92.942	93.942	1.3269								0	0	0	0.42693	1	38781	38781		0.23584	0.076522	1		+		41802	9546	20445	20534	48385	48385					0.008538634428759906
WFQNRRVKH	9	Unmodified	_WFQNRRVKH_					0	0	0		ENST00000507839.1_1_4:54965775-54968086:+|nuORF;ENSG00000169840|ENST00000302945|GSX1;ENSG00000180613|ENST00000326902|GSX2	ENST00000507839.1_1_4:54965775-54968086:+|nuORF	ENST00000507839.1_1_4:54965775-54968086:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	423.7093078494072	3	424.235379	1269.68431	-0.17995	-7.6343E-05	0.8905	0.00037778	0.71054	0.00030144	424.5689376347488	16.436	0.12763	16.436	16.373	16.5	0					5	3	2	0	0	0	0.11216	1	6846	6846		7.609	4.9777	1	104840			41803	4114	20446	20535	48386	48386					0.06025258571116865
WFRFNMKQTLQ	11	Unmodified	_WFRFNMKQTLQ_					0	0	0			REV__ENST00000467774.1_1_1:40312772-40313274:-|nuORF	REV__ENST00000467774.1_1_1:40312772-40313274:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.2592651247978	3	500.258973	1497.75509	0.458	0.00022912	-0.48662	-0.00024344	-0.028616	-1.4315E-05	500.25859113651484	14.338	0.21702	14.338	14.225	14.442	0					15	6	3	0	0	0	1.039	1	5968	5968		0.45452	0	1	1334900	+		41804	13250	20447	20536	48387	48387					0.026121707737729594
WFWWKRKKAII	11	Unmodified	_WFWWKRKKAII_					0	0	0			REV__tr|A0A553SRE9|A0A553SRE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00870PE=4SV=1	REV__tr|A0A553SRE9|A0A553SRE9_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00870PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	781.4615966677666	2	781.461356	1560.90816	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.76	1	102.94	102.44	103.44	0.18066								0	0	0	0.63775	1	43240	43240		0	0	1		+		41805	15159	20448	20537	48388	48388					0.1501415395252934
WGEWMMRERER	11	Unmodified	_WGEWMMRERER_					0	0	0			REV__ENST00000568777.5_1_15:72647792-72649010:-|nuORF	REV__ENST00000568777.5_1_15:72647792-72649010:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.5759765505791	3	522.574855	1564.70274	2.1546	0.0011259	-0.069019	-3.6067E-05	2.0856	0.0010899	522.5747552581768	45.51	3.0986	45.51	45.155	48.254	0					211	98	3	0	0	0	1.0402	3	19105	19105;19516;19597		0.08335	0	1	2880400	+		41806	13917	20449	20538	48389;48390;48391	48389					-0.05702735631530231
WGFCIWIWC	9	Unmodified	_WGFCIWIWC_					0	0	0			REV__ENST00000482384.1_1_1:109756594-109756711:+|nuORF	REV__ENST00000482384.1_1_1:109756594-109756711:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	304.0606872439384	4	304.138496	1212.52488	-2.0021	-0.0006089	0.13285	4.0406E-05	-1.8692	-0.0005685	304.1394834256023	48.238	0.30639	48.238	48.092	48.399	0					13	9	2	0	0	0	0.11957	1	20180	20180		0	0	1	125240	+		41807	13371	20450	20539	48392	48392					-0.07288334092709192
WGLGKPVERKL	11	Unmodified	_WGLGKPVERKL_					0	0	0		ENST00000509297.5_1_5:135469533-135483594:+|nuORF	ENST00000509297.5_1_5:135469533-135483594:+|nuORF	ENST00000509297.5_1_5:135469533-135483594:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	641.8835937380791	2	641.885147	1281.75574	1.4587	0.0009363	-3.3931	-0.002178	-1.9345	-0.0012417	641.8826134702962	80.229	2.5161	81.946	81.106	83.622	1.7167					193	81	4	0	0	0	1.0362	1	33582	33582		1.3295	0.13619	1	9116700			41808	7023	20451	20540	48393	48393					0.12613333485114708
WGLPFLPLLR	10	Unmodified	_WGLPFLPLLR_					0	0	0		ENST00000310585.4_1_3:184059496-184059724:+|nuORF	ENST00000310585.4_1_3:184059496-184059724:+|nuORF	ENST00000310585.4_1_3:184059496-184059724:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	606.3713867068291	2	606.368601	1210.72265	2.699	0.0016366	1.8286	0.0011088	4.5276	0.0027454	606.3697357883393	75.906	2.029	77.673	76.869	78.898	1.7672					116	64	3	0	0	0	0.89646	1	31971	31971		1.8442	0.36234	1	6855700			41809	5799	20452	20541	48394	48394					0.12571751433074496
WGPALHVN	8	Unmodified	_WGPALHVN_					0	0	0			REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	REV__DYNC1H1|p.Q4566Kfs*22|1|0.28|ENSG00000197102|chr14:102050080-102050080|T/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	447.7660095095634	2	447.235045	892.455536	2.8305	0.0012659	-0.15646	-6.9973E-05	2.6741	0.0011959	447.23494488454304	72.369	0.39653	73.698	73.486	73.883	1.3298					23	12	2	0	0	0	2.3239	1	30358	30358		2.5775	0	1	3345000	+		41810	8464	20453	20542	48395	48395					0.005006662743653578
WGPPLLILL	9	Unmodified	_WGPPLLILL_					0	0	0		tr|A0A7D6ZYY0|A0A7D6ZYY0_9CLOTSodium:alaninesymporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04175PE=3SV=1	tr|A0A7D6ZYY0|A0A7D6ZYY0_9CLOTSodium:alaninesymporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04175PE=3SV=1	tr|A0A7D6ZYY0|A0A7D6ZYY0_9CLOTSodium:alaninesymporterfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_04175PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	511.3274108767509	2	511.325871	1020.63719	2.2048	0.0011274	0.6594	0.00033717	2.8642	0.0014646	511.32624775614283	81.37	0.76203	81.661	81.338	82.1	0.29056					80	24	5	0	0	0	0.85403	1	34007	34007		0	0	1	201660000			41811	17202	20454	20543	48396	48396					0.12769586247441111
WGRKPKVI	8	Unmodified	_WGRKPKVI_					0	0	0		ENSG00000172893|ENST00000355527|DHCR7;ENST00000525137.1_2_11:71146423-71148912:-|nuORF	ENSG00000172893|ENST00000355527|DHCR7	ENSG00000172893|ENST00000355527|DHCR7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.3113281130791	2	492.311087	982.60762	3.3745	0.0016613	-2.3975	-0.0011803	0.97696	0.00048097	492.3099615560352	108.98	0.20611	109.13	109.03	109.24	0.1548					17	9	2	0	0	0	0.89008	1	47171	47171		2.5775	1.7838	1	20897000			41812	4259	20455	20544	48397	48397					0.11562067021952771
WGRKPKVI	8	Unmodified	_WGRKPKVI_					0	0	0		ENSG00000172893|ENST00000355527|DHCR7;ENST00000525137.1_2_11:71146423-71148912:-|nuORF	ENSG00000172893|ENST00000355527|DHCR7	ENSG00000172893|ENST00000355527|DHCR7	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	492.311087	982.60762	3.4297	0.0016885	-2.343	-0.0011535	1.0868	0.00053503	492.3103000688689	109	0.088821	109.05	109	109.09	0.050644	-0.066559	-0.00012325	NaN	2.5775	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1805200			41813	4259	20455	20544							0.11562067021952771
WHCDMLADY	9	Unmodified	_WHCDMLADY_					0	0	0			REV__nc|ENSG00000180098|Q9NX07-2|TRNAU1AP	REV__nc|ENSG00000180098|Q9NX07-2|TRNAU1AP	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1535522341728	3	385.152893	1152.43685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.135	1	23.312	22.812	23.812	1.177								0	0	0	0.42693	1	9251	9251		1.1933	0	1		+		41814	11289	20456	20545	48398	48398					-0.1332699947402034
WHCDMLADY	9	Unmodified	_WHCDMLADY_					0	0	0			REV__nc|ENSG00000180098|Q9NX07-2|TRNAU1AP	REV__nc|ENSG00000180098|Q9NX07-2|TRNAU1AP	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1536743044853	3	385.152893	1152.43685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.254	1	23.431	22.931	23.931	1.177								0	0	0	0.42693	1	9301	9301		1.1933	0	1		+		41815	11289	20456	20545	48399	48399					-0.1332699947402034
WHDHSKYPG	9	Unmodified	_WHDHSKYPG_					0	0	0		ENST00000404977.6_1_1:204937408-204955114:+|nuORF;ENST00000512826.5_1_1:204926851-204957975:+|nuORF;nc|ENSG00000163531|O94856-4|NFASC;nc|ENSG00000163531|O94856-12|NFASC;nc|ENSG00000163531|O94856-10|NFASC;nc|ENSG00000163531|O94856-3|NFASC;nc|ENSG00000163531|O94856-8|NFASC;nc|ENSG00000163531|O94856-11|NFASC;nc|ENSG00000163531|O94856-6|NFASC;ENSG00000163531|ENST00000339876|NFASC;nc|ENSG00000163531|O94856-7|NFASC;nc|ENSG00000163531|O94856-13|NFASC;nc|ENSG00000163531|O94856-5|NFASC;nc|ENSG00000163531|O94856|NFASC	ENST00000404977.6_1_1:204937408-204955114:+|nuORF	ENST00000404977.6_1_1:204937408-204955114:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	375.5061218142509	3	376.173674	1125.49919	-1.7495	-0.00065812	0.19181	7.2154E-05	-1.5577	-0.00058596	376.17352755876163	11.967	0.30803	11.967	11.88	12.188	0					13	9	2	0	0	0	0.11787	1	4969	4969		1.1933	0.88631	1	364590			41816	3695	20457	20546	48400	48400					-0.058537690191542424
WHEMQFLHK	9	Unmodified	_WHEMQFLHK_					0	0	0		ENST00000570311.1_1_17:45097119-45126782:+|nuORF	ENST00000570311.1_1_17:45097119-45126782:+|nuORF	ENST00000570311.1_1_17:45097119-45126782:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3160278201103	3	419.206209	1254.5968	0.48024	0.00020132	1.9347	0.00081102	2.4149	0.0010123	419.20679576921765	13.177	0.1898	13.277	13.153	13.343	0.09944					9	5	3	0	0	0	0.11901	1	5495	5495		2.7352	1.0826	1	230850			41817	7389	20458	20547	48401	48401					-0.0203170341465011
WHEWCFCACL	10	Unmodified	_WHEWCFCACL_					0	0	0		ENST00000418448.1_1_13:57889915-57890026:+|nuORF	ENST00000418448.1_1_13:57889915-57890026:+|nuORF	ENST00000418448.1_1_13:57889915-57890026:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	648.9163085818291	2	649.251197	1296.48784	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.687	1	14.8	14.3	15.3	0.11295								0	0	0	0.66155	1	6095	6095		1.8442	0	1				41818	6426	20459	20548	48402	48402					-0.14854373700791257
WHFFSEQRF	9	Unmodified	_WHFFSEQRF_					0	0	0			REV__nc|ENSG00000124299|P12955-2|PEPD	REV__nc|ENSG00000124299|P12955-2|PEPD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3021728396416	2	642.301447	1282.58834	2.1146	0.0013582	-0.15972	-0.00010259	1.9549	0.0012556	642.3006508685133	65.62	0.36691	67.019	66.817	67.184	1.3989					24	11	3	0	0	0	0.5697	1	27501	27501		12.532	0.89125	1	1245400	+		41819	9644	20460	20549	48403	48403					-0.0416493405964502
WHFFSEQRF	9	Unmodified	_WHFFSEQRF_					0	0	0			REV__nc|ENSG00000124299|P12955-2|PEPD	REV__nc|ENSG00000124299|P12955-2|PEPD	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	642.301447	1282.58834	2.1146	0.0013582	-0.15972	-0.00010259	1.9549	0.0012556	642.3006508685133	65.62	0.36691	67.019	66.817	67.184	1.3989	-0.020544	0.00021271	NaN	12.532	24	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1245400	+		41820	9644	20460	20549							-0.0416493405964502
WHKCVLACSR	10	Unmodified	_WHKCVLACSR_					0	0	0			REV__ENSG00000174013|ENST00000311630|FBXO45	REV__ENSG00000174013|ENST00000311630|FBXO45	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	402.1798278689384	3	401.535561	1201.58485	-1.0373	-0.0004165	2.4719	0.00099257	1.4347	0.00057607	401.53649597493916	11.752	0.15261	11.752	11.665	11.818	0					7	4	2	0	0	0	0.12547	1	4830	4830		1.9064	0.83491	1	148170	+		41821	11113	20461	20550	48404	48404					-0.007876434294985302
WHKIRARKRC	10	Unmodified	_WHKIRARKRC_					0	0	0		ENST00000373279.5_1_10:71392915-71393320:+|nuORF	ENST00000373279.5_1_10:71392915-71393320:+|nuORF	ENST00000373279.5_1_10:71392915-71393320:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9334899783134	3	451.931413	1352.77241	3.1348	0.0014167	2.5186	0.0011382	5.6534	0.0025549	451.9325924994982	86.17	0.5386	86.422	86.16	86.699	0.25227					26	17	2	0	0	0	0.89803	1	35976	35976		0.13989	0	1	1040200			41822	6159	20462	20551	48405	48405					0.11013555890099269
WHKPWEQK	8	Unmodified	_WHKPWEQK_					0	0	0			REV__ENST00000428210.5_1_2:61720980-61752425:-|nuORF	REV__ENST00000428210.5_1_2:61720980-61752425:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.1964294314384	3	380.197931	1137.57196	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.794	1	19.242	18.742	19.742	1.448								0	0	0	1.0178	1	7392	7392		3.9444	1.5096	1		+		41823	8825	20463	20552	48406	48406					0.008679847742769198
WHLVKKVKLF	10	Unmodified	_WHLVKKVKLF_					0	0	0		ENST00000476142.1_1_3:56651192-56651654:+|nuORF	ENST00000476142.1_1_3:56651192-56651654:+|nuORF	ENST00000476142.1_1_3:56651192-56651654:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	433.2773010134697	3	433.276293	1296.80705	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.589	1	87.136	86.636	87.636	1.547								0	0	0	0.66264	1	35989	35989		0	0	1				41824	6784	20464	20553	48407	48407					0.17051702249818845
WHPPLPSP	8	Unmodified	_WHPPLPSP_					0	0	0		ENST00000267205.6_1_12:122216768-122217074:-|nuORF	ENST00000267205.6_1_12:122216768-122217074:-|nuORF	ENST00000267205.6_1_12:122216768-122217074:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	930.4838744997978	1	930.483214	929.475937	2.5676	0.0023891	-1.8505	-0.0017218	0.71711	0.00066726	930.4815630887036	87.102	0.88319	87.102	86.551	87.434	0					113	35	4	0	0	0	0.89176	1	36412	36412		0.79363	0	1	83513000			41825	5660	20465	20554	48408	48408					0.008378369341698999
WHRKRKSPRRR	11	Unmodified	_WHRKRKSPRRR_					0	0	0			REV__ENSG00000168517|ENST00000589230|HEXIM2	REV__ENSG00000168517|ENST00000589230|HEXIM2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2853271365166	4	391.489542	1561.92906	2.6571	0.0010402	1.6195	0.00063401	4.2766	0.0016742	391.49031936838895	91.107	0.097862	91.297	91.237	91.335	0.19041					4	2	2	0	0	0	0.14606	1	38154	38154		0	0	1	225410	+		41826	10915	20466	20555	48409	48409					0.1705755710474932
WHRRRKSPRRR	11	Unmodified	_WHRRRKSPRRR_					0	0	0			REV__HEXIM2|p.K99R|1|0.17|ENSG00000168517|chr17:45169244-45169244|A/G|missense_variant	REV__HEXIM2|p.K99R|1|0.17|ENSG00000168517|chr17:45169244-45169244|A/G|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	530.3134033083916	3	530.98568	1589.93521	1.8934	0.0010054	-0.0032021	-1.7003E-06	1.8902	0.0010037	531.3198965820335	94.016	1.3444	94.016	93.296	94.641	0					86	42	3	0	0	0	0.14606	1	39403	39403		0	0	1	1146300	+		41827	14221	20467	20556	48410	48410					0.1638407533625923
WHRRRKSPRRR	11	Unmodified	_WHRRRKSPRRR_					0	0	0			REV__HEXIM2|p.K99R|1|0.17|ENSG00000168517|chr17:45169244-45169244|A/G|missense_variant	REV__HEXIM2|p.K99R|1|0.17|ENSG00000168517|chr17:45169244-45169244|A/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	530.9875976443291	3	530.98568	1589.93521	2.8006	0.0014871	-0.71333	-0.00037877	2.0873	0.0011083	530.9855272929941	93.921	1.278	94.066	93.232	94.51	0.14494					93	39	3	0	0	0	1.0405	1	39157	39157		0	0	1	1127700	+		41828	14221	20467	20556	48411	48411					0.1638407533625923
WHRWRLGK	8	Unmodified	_WHRWRLGK_					0	0	0		ENSG00000215644|ENST00000400723|GCGR	ENSG00000215644|ENST00000400723|GCGR	ENSG00000215644|ENST00000400723|GCGR	MSMS	GG20161007_CRH_Patient100_A02_02	2	380.2165405154228	3	380.217548	1137.63082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.9	1	28.172	27.672	28.672	0.27119								0	0	0	1.0178	1	11670	11670		3.5965	1.9439	1				41829	5258	20468	20557	48412	48412					0.06750505859258737
WHSFSHWW	8	Unmodified	_WHSFSHWW_					0	0	0			REV__ENST00000584911.1_1_6:166362229-166362403:-|nuORF	REV__ENST00000584911.1_1_6:166362229-166362403:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2840759158134	3	391.506876	1171.4988	0.024722	9.6789E-06	-2.327	-0.00091103	-2.3023	-0.00090135	391.5046052701446	15.185	0.29262	16.081	15.96	16.253	0.89664					12	9	2	0	0	0	2.3239	1	6317	6317		4.3292	4.0934	1	154940	+		41830	14012	20469	20558	48413	48413					-0.08009143948333985
WHSNEYHD	8	Unmodified	_WHSNEYHD_					0	0	0			REV__nc|ENSG00000078687|Q9HCJ0-4|TNRC6C	REV__nc|ENSG00000078687|Q9HCJ0-4|TNRC6C	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.2159911990166	2	544.215037	1086.41552	0.52223	0.00028421	1.2385	0.00067398	1.7607	0.00095819	544.2154513954781	18.446	0.5368	18.446	18.267	18.804	0					26	17	2	0	0	0	0.88587	1	7702	7702		5.2307	2.9279	1	604980	+		41831	8790	20470	20559	48414	48414					-0.12422925186865541
WIALTIKFFL	10	Unmodified	_WIALTIKFFL_					0	0	0			REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|191|3|anti-sense	REV__L1MB3_dup1513|chr1:246270299-246273131:-|1.1805691521590191|0.3959605958472513|1.58|429.0|191|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	417.9232971072197	3	417.921515	1250.74272	4.0522	0.0016935	1.2053	0.0005037	5.2574	0.0021972	417.9216999146048	93.625	0.54105	94.496	94.226	94.767	0.87176					51	16	4	0	0	0	0.89803	1	39342	39342		0.15932	0	1	8998200	+		41832	14274	20471	20560	48415	48415					0.1273750237303375
WIGIWTRSF	9	Unmodified	_WIGIWTRSF_					0	0	0			REV__ENSG00000157240|ENST00000287934|FZD1	REV__ENSG00000157240|ENST00000287934|FZD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	389.8660156130791	3	389.209948	1164.60801	1.921	0.00074767	-1.3945	-0.00054275	0.52651	0.00020492	389.209490178584	40.558	0.40959	42.421	42.265	42.675	1.8624					22	12	2	0	0	0	0.10786	1	17052	17052		19.362	7.1872	1	1113900	+		41833	10534	20472	20561	48416	48416					0.03229441951134504
WIHNSTYIEK	10	Unmodified	_WIHNSTYIEK_					0	0	0			REV__ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	REV__ITPR3|p.V2611Afs*24|1|0.09|ENSG00000096433|chr6:33694969-33694970|-/CC|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.887422	1289.64044	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.86	1	13.648	13.148	14.148	0.78751								0	0	0	0.66151	1	5334	5334		1.9064	0.57673	1		+		41834	8938	20473	20562	48417	48417					0.0072018456346540916
WIIHLLGIFL	10	Unmodified	_WIIHLLGIFL_					0	0	0		ENST00000441843.5_1_13:44464405-44465735:+|nuORF	ENST00000441843.5_1_13:44464405-44465735:+|nuORF	ENST00000441843.5_1_13:44464405-44465735:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	612.8806030154228	2	612.878802	1223.74305	2.3494	0.0014399	0.24986	0.00015313	2.5993	0.001593	612.8789699738813	92.457	0.54774	92.457	92.164	92.712	0					69	17	5	0	0	0	0.87343	1	38599	38599		4.3292	0	1	43255000			41835	6557	20474	20563	48418	48418					0.14012922092888402
WIIIKVIK	8	Unmodified	_WIIIKVIK_					0	0	0			REV__ENST00000454652.6_1_3:183397159-183397345:+|nuORF	REV__ENST00000454652.6_1_3:183397159-183397345:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	337.7003967165947	3	338.235434	1011.68447	0.86615	0.00029296	0.90159	0.00030495	1.7677	0.00059791	338.23581687405743	54.691	0.28467	56.66	56.495	56.779	1.9684					12	9	2	0	0	0	2.3239	1	22868	22868		5.7319	4.0792	1	1591100	+		41836	13157	20475	20564	48419	48419					0.17909865518424795
WIIWEELVR	9	Unmodified	_WIIWEELVR_					0	0	0		TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant;TOP2A|p.R200Wfs*44|1|0.04|ENSG00000131747|chr17:40412950-40412951|-/TCCCATATTATCCA|frameshift_variant	TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	TOP2A|p.D196Gfs*45|1|0.45|ENSG00000131747|chr17:40412961-40412962|-/CCATC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	622.3478881716728	2	622.345323	1242.67609	3.8504	0.0023963	0.21136	0.00013154	4.0617	0.0025278	622.3454878545537	91.19	0.6326	92.171	91.942	92.575	0.98157					75	19	5	0	0	0	0.55689	4	38414	38376;38414;38453;38493		13.508	4.1248	1	29446000			41837	16032	20476	20565	48420;48421;48422;48423	48421					0.06446266811121859
WIKEDKTYRKR	11	Unmodified	_WIKEDKTYRKR_					0	0	0			REV__tr|A0A553SQY5|A0A553SQY5_NIACIThioredoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_07495PE=4SV=1	REV__tr|A0A553SQY5|A0A553SQY5_NIACIThioredoxinfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_07495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	508.2899963259697	3	508.287808	1521.8416	2.6823	0.0013634	1.5975	0.00081197	4.2798	0.0021754	508.2886821522149	40.527	0.74159	41.837	41.453	42.195	1.3102					75	23	5	0	0	0	1.0372	1	17065	17065		1.0136	0.55906	1	16690000	+		41838	15127	20477	20566	48424	48424					0.10154873599958592
WILLLRYYIHL	11	Unmodified	_WILLLRYYIHL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.9695007205009	3	501.634257	1501.88094	3.176	0.0015932	0.04309	2.1616E-05	3.2191	0.0016148	501.634136526612	90.648	1.9841	90.857	90.049	92.033	0.20904					149	61	3	0	0	0	1.0393	1	38121	38121		0.094841	0	1	2134000			41839	4871	20478	20567	48425	48425					0.15007625621524312
WILLLRYYIHL	11	Unmodified	_WILLLRYYIHL_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	501.6368896365166	3	501.634257	1501.88094	4.9743	0.0024953	0.058833	2.9512E-05	5.0331	0.0025248	501.63413464422814	89.949	1.2977	90.968	90.203	91.5	1.0199					110	40	3	0	0	0	1.0393	1	37667	37667		0.094841	0	1	2075000			41840	4871	20478	20567	48426	48426					0.15007625621524312
WILVFMRGLL	10	Unmodified	_WILVFMRGLL_					0	0	0			REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	REV__nc|ENSG00000167723|Q8NET8-3|TRPV3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	624.8227416872978	2	624.370287	1246.72602	2.3338	0.0014571	2.1708	0.0013554	4.5046	0.0028125	624.3722125952274	92.517	0.26904	92.517	92.321	92.59	0					14	8	2	0	0	0	0.12513	1	38670	38670		7.9102	1.7044	1	912530	+		41841	10877	20479	20568	48427	48427					0.11252678215441847
WINNGGFG	8	Unmodified	_WINNGGFG_					0	0	0			REV__tr|A0A7D6ZS19|A0A7D6ZS19_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06025PE=4SV=1	REV__tr|A0A7D6ZS19|A0A7D6ZS19_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06025PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	432.7039062380791	2	432.703577	863.392602	1.6369	0.00070828	0.41145	0.00017804	2.0483	0.00088632	432.70349145572334	70.253	0.54221	70.575	70.288	70.83	0.32224					45	17	3	0	0	0	0.89176	1	29395	29395		0.79363	0	1	24528000	+		41842	15700	20480	20569	48428	48428					-0.04455899513652639
WIPLLKARKSI	11	Unmodified	_WIPLLKARKSI_					0	0	0		IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	442.3186218142509	3	442.286969	1323.83908	3.3833	0.0014964	2.7143	0.0012005	6.0976	0.0026969	442.28825867266863	107.28	0.22527	107.44	107.36	107.58	0.15781					29	11	4	0	0	0	0.14606	1	46183	46183		0.45452	0	1	26776000			41843	7655	20481	20570	48429	48429					0.19011069932980718
WIPLLKARKSI	11	Unmodified	_WIPLLKARKSI_					0	0	0		IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	IGHMBP2|p.C395S|1|0.06|ENSG00000132740|chr11:68929305-68929305|T/A|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	442.286969	1323.83908	3.3647	0.0014882	1.1086	0.00049033	4.4734	0.0019785	442.6219536411888	107.3	0.1912	107.45	107.35	107.54	0.15796	0.0054395	-0.0011062	NaN	0.45452	24	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	15265000			41844	7655	20481	20570							0.19011069932980718
WIPRTQQERII	11	Unmodified	_WIPRTQQERII_					0	0	0			REV__nc|ENSG00000105289|O95049-5|TJP3	REV__nc|ENSG00000105289|O95049-5|TJP3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	480.2929870486259	3	480.60877	1438.80448	2.4065	0.0011566	0.081842	3.9334E-05	2.4884	0.0011959	480.6093101656082	38.679	0.61359	38.987	38.786	39.399	0.30857					23	20	2	0	0	0	0.14606	1	16229	16229		1.3296	0	1	520490	+		41845	9165	20482	20571	48430	48430					0.10263202054215981
WIQVKLRSV	9	Unmodified	_WIQVKLRSV_					0	0	0			REV__ENST00000589188.5_3_19:37809061-37814458:+|nuORF	REV__ENST00000589188.5_3_19:37809061-37814458:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	376.2328979372978	3	376.901114	1127.68151	0.28428	0.00010714	3.001	0.0011311	3.2853	0.0012382	376.90221875785284	85.019	0.79551	85.019	84.653	85.448	0					28	24	2	0	0	0	0.11941	1	35580	35580		0.23584	0	1	533060	+		41846	14052	20483	20572	48431	48431					0.12277990393590699
WIQVKLRSV	9	Unmodified	_WIQVKLRSV_					0	0	0			REV__ENST00000589188.5_3_19:37809061-37814458:+|nuORF	REV__ENST00000589188.5_3_19:37809061-37814458:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	376.2348815798759	3	376.901114	1127.68151	1.7065	0.00064318	3.3675	0.0012692	5.074	0.0019124	377.236954678202	83.093	0.65193	84.281	83.927	84.579	1.1879					26	20	2	0	0	0	0.11938	1	34872	34872		1.1933	0	1	289950	+		41847	14052	20483	20572	48432	48432					0.12277990393590699
WIRSKGIF	8	Unmodified	_WIRSKGIF_					0	0	0			REV__tr|A0A7D6W2B0|A0A7D6W2B0_9CLOTQuaternaryaminetransportATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05715PE=3SV=1	REV__tr|A0A7D6W2B0|A0A7D6W2B0_9CLOTQuaternaryaminetransportATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05715PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	336.2013732790947	3	336.199272	1005.57599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.041	1	87.588	87.088	88.088	1.547								0	0	0	1.0178	1	36236	36236		0.45834	0	1		+		41848	15603	20484	20573	48433	48433					0.07342074268001397
WIVDSYKGT	9	Unmodified	_WIVDSYKGT_					0	0	0		tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	534.7725097537041	2	534.771657	1067.52876	1.9255	0.0010297	-1.5314	-0.00081896	0.39412	0.00021076	534.7711345960126	64.01	0.25271	64.01	63.89	64.143	0					17	7	3	0	0	0	0.46566	1	26694	26694		17.113	2.5312	1	1129400			41849	16706	20485	20574	48434	48434					-0.002302497936625514
WIVDSYKGT	9	Unmodified	_WIVDSYKGT_					0	0	0		tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	tr|A0A553SUS9|A0A553SUS9_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_06750PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	534.7704345583916	2	534.771657	1067.52876	1.9834	0.0010607	-3.8553	-0.0020617	-1.8719	-0.0010011	534.7699426469029	63.654	0.3579	63.983	63.788	64.146	0.32899					19	11	2	0	0	0	0.40005	1	26662	26662		20.415	0.97554	1	2171300			41850	16706	20485	20574	48435	48435					-0.002302497936625514
WIVKNRFL	8	Unmodified	_WIVKNRFL_					0	0	0			REV__ENSG00000075673|ENST00000381946|ATP12A	REV__ENSG00000075673|ENST00000381946|ATP12A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3270141482353	2	538.324194	1074.63383	3.0129	0.0016219	4.4879	0.0024159	7.5008	0.0040379	538.3256708523464	84.956	0.57192	86.553	86.25	86.822	1.5962					47	21	3	0	0	0	0.89176	1	35660	35660		0.79363	0	1	53984000	+		41851	8766	20486	20575	48436	48436					0.09950336193423936
WIVLSYLK	8	Unmodified	_WIVLSYLK_					0	0	0			REV__nc|ENSG00000168398|P30411-2|BDKRB2	REV__nc|ENSG00000168398|P30411-2|BDKRB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	512.3124877810478	2	511.307678	1020.6008	1.4592	0.00074609	0.79858	0.00040832	2.2578	0.0011544	511.3074857658362	102.73	0.53416	102.73	102.4	102.93	0					112	39	4	0	0	0	0.89176	1	42984	42984		0.79363	0	1	75857000	+		41852	10908	20487	20576	48437	48437					0.09132709350706136
WKAVVRLG	8	Unmodified	_WKAVVRLG_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	310.1963073611259	3	310.19575	927.565421	-0.38332	-0.00011891	1.4217	0.00044102	1.0384	0.00032211	310.196113919014	17.245	0.52734	18.547	18.142	18.67	1.3023					49	17	3	0	0	0	0.89178	1	7167	7167		0.40072	0	1	7389000	+		41853	8693	20488	20577	48438	48438					0.09874091613562541
WKAVVRLG	8	Unmodified	_WKAVVRLG_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	310.19575	927.565421	-0.19546	-6.0632E-05	2.073	0.00064304	1.8776	0.00058241	310.1964175440262	18.443	0.57816	18.616	18.202	18.78	0.17285	0.058001	1.9203E-05	NaN	0.40072	70	21	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6894600	+		41854	8693	20488	20577							0.09874091613562541
WKAVVRLG	8	Unmodified	_WKAVVRLG_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	310.19575	927.565421	-0.76857	-0.00023841	2.3326	0.00072355	1.564	0.00048515	310.19640315914	17.613	0.69023	18.511	18.02	18.71	0.89794	-0.047048	0.00026075	NaN	0.40072	76	27	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6018700	+		41855	8693	20488	20577							0.09874091613562541
WKAVVRLG	8	Unmodified	_WKAVVRLG_					0	0	0			REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	REV__ENST00000572085.5_1_15:43707600-43785241:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	310.19575	927.565421	-0.38332	-0.00011891	1.4217	0.00044102	1.0384	0.00032211	310.196113919014	17.245	0.52734	18.547	18.142	18.67	1.3023	-0.010953	-0.00058687	NaN	0.40072	49	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7389000	+		41856	8693	20488	20577							0.09874091613562541
WKEDDDFHI	9	Unmodified	_WKEDDDFHI_					0	0	0			REV__MMP10|p.F308Lfs*20|1|0.11|ENSG00000166670|chr11:102776291-102776291|G/-|frameshift_variant	REV__MMP10|p.F308Lfs*20|1|0.11|ENSG00000166670|chr11:102776291-102776291|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	402.1796142458916	3	402.180494	1203.51965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.4893	1	9.2238	8.7238	9.7238	0.73452								0	0	0	0.42693	1	3529	3529		0.26902	0	1		+		41857	10833	20489	20578	48439	48439					-0.07396643149991178
WKGEVHGQ	8	Unmodified	_WKGEVHGQ_					0	0	0		CON__ENSEMBL:ENSBTAP00000001528	CON__ENSEMBL:ENSBTAP00000001528	CON__ENSEMBL:ENSBTAP00000001528	MSMS	GG20161007_CRH_Patient100_W632_01	3	314.1594116091728	3	314.159365	939.456264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.482	1	77.775	77.275	78.275	1.2938								0	0	0	1.0178	1	32108	32108		0.40072	0	1			+	41858	325	20490	20579	48440	48440					-0.015885390765674856
WKGIQRRRR	9	Unmodified	_WKGIQRRRR_					0	0	0		ENST00000409014.5_1_14:69676187-69676861:+|nuORF;ENST00000492815.5_1_14:69676187-69701514:+|nuORF;ENSG00000081177|ENST00000685843|EXD2	ENST00000409014.5_1_14:69676187-69676861:+|nuORF	ENST00000409014.5_1_14:69676187-69676861:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3846313357353	2	628.383971	1254.75339	2.2153	0.0013921	-1.9219	-0.0012077	0.29339	0.00018436	628.3827071245355	80.74	0.59271	80.74	80.447	81.04	0					36	18	3	0	0	0	0.85019	1	33543	33543		0.52476	0.066424	1	1573100			41859	1016	20491	20580	48441	48441					0.13620342590661494
WKGLLVSP	8	Unmodified	_WKGLLVSP_					0	0	0			REV__ENST00000367265.7_1_1:202725604-202729586:-|nuORF	REV__ENST00000367265.7_1_1:202725604-202729586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2739135622978	2	450.271096	898.527639	2.5546	0.0011503	3.6608	0.0016483	6.2154	0.0027986	450.2732259615331	86.888	1.0321	86.888	86.519	87.551	0					72	40	3	0	0	0	0.89051	3	36251	36251;36344;36467		2.3027	2.3027	1	8724700	+		41860	12622	20492	20581	48442;48443;48444	48442					0.07431580628087886
WKGLLVSP	8	Unmodified	_WKGLLVSP_					0	0	0			REV__ENST00000367265.7_1_1:202725604-202729586:-|nuORF	REV__ENST00000367265.7_1_1:202725604-202729586:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	450.2728759646416	2	450.271096	898.527639	3.1294	0.0014091	2.8856	0.0012993	6.015	0.0027084	450.27263730790816	86.604	0.76884	86.848	86.333	87.102	0.24387					57	28	3	0	0	0	0.89051	3	36181	36181;36245;36342		2.3027	1.5091	1	8508100	+		41861	12622	20492	20581	48445;48446;48447	48445					0.07431580628087886
WKIFLLLL	8	Unmodified	_WKIFLLLL_					0	0	0		ENST00000452075.7_1_10:43015418-43015709:-|nuORF	ENST00000452075.7_1_10:43015418-43015709:-|nuORF	ENST00000452075.7_1_10:43015418-43015709:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3053466677666	2	523.344064	1044.67357	1.9205	0.0010051	-2.5818	-0.0013512	-0.66128	-0.00034608	523.3431037764602	84.48	0.31773	85.639	85.464	85.782	1.159					14	9	2	0	0	0	0.87276	1	35500	35500		13.508	0	1	1247700			41862	6615	20493	20582	48448	48448					0.15302463144143985
WKIKFINLK	9	Unmodified	_WKIKFINLK_					0	0	0		nc|nan|Q5JPI3-2|C3orf38;ENSG00000179021|ENST00000318887|C3orf38	nc|nan|Q5JPI3-2|C3orf38	nc|nan|Q5JPI3-2|C3orf38	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1189.242480456829	1	1189.74558	1188.7383	2.7759	0.0033026	-1.6593	-0.0019742	1.1165	0.0013284	1189.7433398255234	87.057	0.25588	87.057	86.864	87.12	0					14	10	2	0	0	0	0.11948	1	36281	36281		0.52476	0	1	18982000			41863	4503	20494	20583	48449	48449					0.15148037950098114
WKILYYSLLL	10	Unmodified	_WKILYYSLLL_					0	0	0			REV__ENSG00000030066|ENST00000378460|NUP160	REV__ENSG00000030066|ENST00000378460|NUP160	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	329.0048705935478	4	328.698238	1310.76385	-2.4229	-0.00079641	-0.31126	-0.00010231	-2.7342	-0.00089872	328.6981982080628	29.958	0.58382	29.958	29.608	30.192	0					43	18	3	0	0	0	0.12561	1	12568	12568		0.15932	0	1	1290400	+		41864	8574	20495	20584	48450	48450					0.12089467681880706
WKIVQIPFLHR	11	Unmodified	_WKIVQIPFLHR_					0	0	0			REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	REV__nc|ENSG00000091157|Q9Y4E6-2|WDR7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	359.9689208865166	4	359.968583	1435.84522	0.5029	0.00018103	0.2418	8.7041E-05	0.7447	0.00026807	359.9684993365616	56.625	0.41942	58.594	58.394	58.814	1.9684					25	13	3	0	0	0	1.0224	1	23774	23774		2.4348	0	1	1509800	+		41865	8902	20496	20585	48451	48451					0.14473588164491957
WKKKLLDY	8	Unmodified	_WKKKLLDY_					0	0	0		ENST00000471841.5_1_3:179107829-179107886:+|nuORF	ENST00000471841.5_1_3:179107829-179107886:+|nuORF	ENST00000471841.5_1_3:179107829-179107886:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	547.3207275271416	2	547.32386	1092.63317	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.342	1	71.665	71.165	72.165	0.32359								0	0	0	1.0178	1	29858	29858		0.69038	0.088878	1				41866	6745	20497	20586	48452	48452					0.09055496753717307
WKKQRLEYDKR	11	Unmodified	_WKKQRLEYDKR_					0	0	0			REV__ENSG00000070019|ENST00000261170|GUCY2C	REV__ENSG00000070019|ENST00000261170|GUCY2C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	516.7848998904228	3	517.291441	1548.85249	2.7299	0.0014121	0.047534	2.4589E-05	2.7774	0.0014367	517.6251418294139	87.983	2.2412	87.983	87.378	89.62	0					140	72	3	0	0	0	0.14606	1	36528	36528		0.45452	0.45452	1	1473600	+		41867	8713	20498	20587	48453	48453					0.10002275974238728
WKKRKRKEKES	11	Unmodified	_WKKRKRKEKES_					0	0	0		ENST00000597112.5_1_19:53589508-53594680:-|nuORF;ENST00000602095.5_1_19:53589338-53594892:-|nuORF	ENST00000597112.5_1_19:53589508-53594680:-|nuORF	ENST00000597112.5_1_19:53589508-53594680:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.6375305056572	3	501.63532	1501.88413	3.1515	0.0015809	-0.51687	-0.00025928	2.6346	0.0013216	501.6349355477787	88.555	1.6852	88.789	88.133	89.818	0.23471					83	52	2	0	0	0	1.0395	1	36882	36882		0.08335	0.010087	1	1234800			41868	7524	20499	20588	48454	48454					0.15326268728176728
WKKRLIRIK	9	Unmodified	_WKKRLIRIK_					0	0	0		CPT1B|p.M204Wfs*31|1|0.21|ENSG00000205560|chr22:50576288-50576288|G/-|frameshift_variant;nc|ENSG00000205560|Q92523-2|CPT1B;nc|ENSG00000205560|Q92523-4|CPT1B;nc|ENSG00000205560|Q92523-3|CPT1B;ENSG00000205560|ENST00000312108|CPT1B	CPT1B|p.M204Wfs*31|1|0.21|ENSG00000205560|chr22:50576288-50576288|G/-|frameshift_variant	CPT1B|p.M204Wfs*31|1|0.21|ENSG00000205560|chr22:50576288-50576288|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	414.2856933474541	3	414.28367	1239.82918	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.35	1	107.5	107	108	0.15781								0	0	0	0.42693	1	46150	46150		0.23584	0	1				41869	370	20500	20589	48455	48455					0.21885926718255178
WKKRQPLL	8	Unmodified	_WKKRQPLL_					0	0	0			REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	356.2802917361259	3	356.894071	1067.66038	0.81685	0.00029153	2.5816	0.00092136	3.3985	0.0012129	356.8950759513857	79.93	0.58111	81.646	81.383	81.964	1.7167					25	18	2	0	0	0	2.3239	1	33508	33508		0.40072	0	1	558780	+		41870	13592	20501	20590	48456	48456					0.1292602508476648
WKKRQPLL	8	Unmodified	_WKKRQPLL_					0	0	0			REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	356.894071	1067.66038	1.738	0.00062027	-0.41755	-0.00014902	1.3204	0.00047125	356.89448289060505	81.337	0.58023	81.627	81.183	81.763	0.29055	0.072297	-0.0020286	NaN	0.40072	29	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	633350	+		41871	13592	20501	20590							0.1292602508476648
WKKRQPLL	8	Unmodified	_WKKRQPLL_					0	0	0			REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	REV__ENST00000514484.6_1_5:1521523-1523839:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	356.894071	1067.66038	1.3992	0.00049937	1.5274	0.00054513	2.9266	0.0010445	356.8947767920089	80.14	0.46609	81.392	81.109	81.575	1.2512	-0.16358	5.3818E-05	NaN	0.40072	24	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	649050	+		41872	13592	20501	20590							0.1292602508476648
WKKYKFIVL	9	Unmodified	_WKKYKFIVL_					0	0	0		nc|ENSG00000113916|P41182-2|BCL6;ENSG00000113916|ENST00000406870|BCL6	nc|ENSG00000113916|P41182-2|BCL6	nc|ENSG00000113916|P41182-2|BCL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	612.8806640505791	2	612.878802	1223.74305	2.5583	0.0015679	-0.050959	-3.1232E-05	2.5073	0.0015367	612.8786801172273	92.37	0.55605	92.538	92.281	92.837	0.16835					67	17	5	0	0	0	0.83213	1	38645	38645		2.0598	0.57785	1	38741000			41873	1842	20502	20591	48457	48457					0.14012922092888402
WKLFLLLK	8	Unmodified	_WKLFLLLK_					0	0	0		ENST00000262288.7_1_17:55083728-55083794:+|nuORF	ENST00000262288.7_1_17:55083728-55083794:+|nuORF	ENST00000262288.7_1_17:55083728-55083794:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.8538696169853	2	530.849513	1059.68447	3.4567	0.001835	3.2962	0.0017498	6.7529	0.0035848	530.851383019886	107.55	0.24409	107.71	107.56	107.81	0.15795					44	12	5	0	0	0	0.89178	1	46191	46191		0.69038	0	1	2067699999.9999998			41874	5634	20503	20592	48458	48458					0.15701865518417435
WKLGMNKR	8	Unmodified	_WKLGMNKR_					0	0	0		ENSG00000255151|ENST00000527482|GLYATL1B	ENSG00000255151|ENST00000527482|GLYATL1B	ENSG00000255151|ENST00000527482|GLYATL1B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	516.3157836794853	2	516.792204	1031.56985	2.6247	0.0013564	1.5953	0.00082441	4.22	0.0021809	516.7931662648953	84.352	0.72679	84.352	84.086	84.813	0					49	22	4	0	0	0	2.3239	1	35064	35064		0.69038	0	1	7053000			41875	5398	20504	20593	48459	48459					0.055332327648102364
WKLIVQPNIR	10	Unmodified	_WKLIVQPNIR_					0	0	0		ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	317.1959106326103	4	317.447483	1265.76083	-2.432	-0.00077202	0.012439	3.9488E-06	-2.4195	-0.00076807	317.44744817573235	36.693	0.53169	36.693	36.5	37.032	0					75	29	3	0	0	0	0.12551	1	15411	15411		3.3196	3.3196	1	18804000			41876	6406	20505	20594	48460	48460					0.1385763734772354
WKLIVQPNIR	10	Unmodified	_WKLIVQPNIR_					0	0	0		ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	422.5926086306572	3	422.927552	1265.76083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.428	1	35.702	35.202	36.202	1.2746								0	0	0	0.66068	1	14451	14451		3.3196	0.88486	1				41877	6406	20505	20594	48461	48461					0.1385763734772354
WKLIVQPNIR	10	Unmodified	_WKLIVQPNIR_					0	0	0		ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	ENST00000416030.1_1_9:76089327-76090080:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	422.9272338747978	3	422.927552	1265.76083	NaN	NaN	NaN	NaN	NaN	NaN	NaN	33.842	1	35.665	35.165	36.165	1.8227								0	0	0	0.66068	1	14194	14194		3.3196	0.88486	1				41878	6406	20505	20594	48462	48462					0.1385763734772354
WKLKLRLLHG	10	Unmodified	_WKLKLRLLHG_					0	0	0			REV__ENST00000406785.6_1_2:40656510-40656594:-|nuORF	REV__ENST00000406785.6_1_2:40656510-40656594:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.4080078005791	2	632.40605	1262.79755	2.7707	0.0017522	2.6941	0.0017037	5.4647	0.0034559	632.4074583645872	107.33	0.17243	107.49	107.39	107.56	0.15796					28	8	4	0	0	0	0.89803	1	46072	46072		0.40072	0.40072	1	153840000	+		41879	12900	20506	20595	48463	48463					0.17665933964303804
WKLLGPGR	8	Unmodified	_WKLLGPGR_					0	0	0			REV__ENST00000588286.1_1_19:36036058-36036391:-|nuORF	REV__ENST00000588286.1_1_19:36036058-36036391:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	309.5243408083916	3	309.523867	925.549771	0.18164	5.6222E-05	1.3912	0.00043062	1.5729	0.00048684	309.5242623976525	25.344	0.58393	25.596	25.305	25.889	0.25197					49	18	5	0	0	0	0.89152	2	10572	10572;10613		1.6526	0	1	14133000	+		41880	14044	20507	20596	48464;48465	48464					0.08401805096514181
WKLLGPGR	8	Unmodified	_WKLLGPGR_					0	0	0			REV__ENST00000588286.1_1_19:36036058-36036391:-|nuORF	REV__ENST00000588286.1_1_19:36036058-36036391:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	3	309.523867	925.549771	-0.11392	-3.5262E-05	1.7084	0.0005288	1.5945	0.00049354	309.52434248858873	23.803	0.47948	25.488	25.243	25.722	1.6845					44	15	5	0	0	0	0.89152	1	9918	9918		1.6526	0	1	15722000	+		41881	14044	20507	20596	48466	48466					0.08401805096514181
WKLLKAHLL	9	Unmodified	_WKLLKAHLL_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	374.5786010622978	3	374.577972	1120.71209	1.1153	0.00041776	1.3085	0.00049015	2.4238	0.00090791	374.57836312752977	32.342	0.43455	32.636	32.371	32.805	0.29431					42	13	4	0	0	0	0.82654	2	13619	13526;13619		2.2828	0	1	5526900	+		41882	10387	20508	20597	48467;48468	48468					0.15655768778628953
WKLLKAHLL	9	Unmodified	_WKLLKAHLL_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	374.5787231326103	3	374.577972	1120.71209	-0.1748	-6.5476E-05	2.2265	0.00083399	2.0517	0.00076851	374.5787465343838	31.197	0.50398	32.478	32.151	32.655	1.2813					47	15	4	0	0	0	0.847	1	13031	13031		0.96228	0	1	4726500	+		41883	10387	20508	20597	48469	48469					0.15655768778628953
WKLLKAHLLL	10	Unmodified	_WKLLKAHLLL_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	309.5243102908134	4	309.456314	1233.79615	-0.08594	-2.6595E-05	-1.2616	-0.0003904	-1.3475	-0.000417	309.45572078357895	24.393	1.2507	26.077	25.414	26.665	1.6845					52	25	3	0	0	0	0.1256	1	9968	9968		0.69767	0.24315	1	2387600	+		41884	10387	20509	20598	48470	48470					0.18860299875541386
WKLLKAHLLL	10	Unmodified	_WKLLKAHLLL_					0	0	0			REV__nc|ENSG00000150760|Q14185|DOCK1	REV__nc|ENSG00000150760|Q14185|DOCK1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	309.456314	1233.79615	0.12475	3.8605E-05	-1.3325	-0.00041235	-1.2077	-0.00037374	309.70621829243026	24.716	0.53395	25.957	25.794	26.328	1.241	-0.15606	0.00023379	NaN	0.69767	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3819900	+		41885	10387	20509	20598							0.18860299875541386
WKLLQPIP	8	Unmodified	_WKLLQPIP_					0	0	0		ENST00000269260.6_1_17:4624342-4624531:+|nuORF	ENST00000269260.6_1_17:4624342-4624531:+|nuORF	ENST00000269260.6_1_17:4624342-4624531:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	332.2065612673759	3	332.207656	993.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.272	1	51.272	50.772	51.772	0								0	0	0	1.0178	1	21383	21383		0.40072	0	1				41886	5669	20510	20599	48471	48471					0.10408129070549421
WKLLQPIP	8	Unmodified	_WKLLQPIP_					0	0	0		ENST00000269260.6_1_17:4624342-4624531:+|nuORF	ENST00000269260.6_1_17:4624342-4624531:+|nuORF	ENST00000269260.6_1_17:4624342-4624531:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	332.2066528201103	3	332.207656	993.601138	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.799	1	83.069	82.569	83.569	0.27029								0	0	0	1.0178	1	34626	34626		0.40072	0	1				41887	5669	20510	20599	48472	48472					0.10408129070549421
WKLLRFFRRRA	11	Unmodified	_WKLLRFFRRRA_					0	0	0		ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	387.9904968142509	4	387.990115	1547.93135	1.5725	0.00061013	0.92257	0.00035795	2.4951	0.00096808	387.99046324832545	38.385	1.6225	38.694	38.424	40.046	0.30857					237	67	5	0	0	0	1.0402	1	16128	16128		0.073264	0.073264	1	17874000			41888	6964	20511	20600	48473	48473					0.17930592789844013
WKLLRFFRRRA	11	Unmodified	_WKLLRFFRRRA_					0	0	0		ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2406494021416	4	387.990115	1547.93135	-0.44651	-0.00017324	2.235	0.00086715	1.7885	0.00069391	388.24137773707247	36.408	0.7895	37.684	37.456	38.246	1.2762					126	43	5	0	0	0	1.0391	1	15516	15516		0.40827	0.31342	1	17055000			41889	6964	20511	20600	48474	48474					0.17930592789844013
WKLLRFFRRRA	11	Unmodified	_WKLLRFFRRRA_					0	0	0		ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	388.2424499392509	4	387.990115	1547.93135	-0.24158	-9.3731E-05	1.4192	0.00055065	1.1776	0.00045691	387.99080029063776	37.11	0.33751	38.394	38.254	38.591	1.284					64	29	3	0	0	0	1.0391	1	15567	15567		0.40827	0.31342	1	10964000			41890	6964	20511	20600	48475	48475					0.17930592789844013
WKLLRFFRRRA	11	Unmodified	_WKLLRFFRRRA_					0	0	0		ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.9906188845634	4	387.990115	1547.93135	0.56159	0.00021789	0.84811	0.00032906	1.4097	0.00054695	387.9905208889514	35.839	0.69927	37.657	37.419	38.118	1.8176					134	42	4	0	0	0	1.0402	1	15026	15026		0.08335	0.08335	1	18143000			41891	6964	20511	20600	48476	48476					0.17930592789844013
WKLLRFFRRRA	11	Unmodified	_WKLLRFFRRRA_					0	0	0		ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	ENST00000497791.5_1_3:124456468-124456537:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	387.9900390505791	4	387.990115	1547.93135	0.55279	0.00021448	0.35093	0.00013616	0.90372	0.00035063	387.99033557006	36.402	0.28302	38.219	38.118	38.401	1.8176					52	22	3	0	0	0	1.0391	1	15255	15255		0.40827	0.041592	1	10526000			41892	6964	20511	20600	48477	48477					0.17930592789844013
WKLNPKKKKQ	10	Unmodified	_WKLNPKKKKQ_					0	0	0		WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant;ENST00000507765.1_1_4:6290695-6304192:+|nuORF;ENSG00000109501|ENST00000226760|WFS1;WFS1|p.I250Lfs*7|1|0.42|ENSG00000109501|chr4:6295074-6295075|-/ACTATACATCCTGCTTCCCT|frameshift_variant	WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant	WFS1|p.C360Sfs*82|1|0.31|ENSG00000109501|chr4:6300874-6300874|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	433.2765685915947	3	433.274952	1296.80303	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.238	1	87.238	86.738	87.738	0								0	0	0	0.6624	1	36434	36434		0.13989	0.056541	1				41893	1667	20512	20601	48478	48478					0.16649612756123133
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4550659060478	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.54	1	113.54	113.04	114.04	0								0	0	0	0.63775	1	49049	49049		0	0	1		+		41894	14792	20513	20602	48479	48479					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4532958865166	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.67	1	113.67	113.17	114.17	0								0	0	0	0.63775	1	49100	49100		0	0	1		+		41895	14792	20513	20602	48480	48480					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4511596560478	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.79	1	113.79	113.29	114.29	0								0	0	0	0.63775	1	49151	49151		0	0	1		+		41896	14792	20513	20602	48481	48481					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4534789919853	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.98	1	113.98	113.48	114.48	0								0	0	0	0.63775	1	49227	49227		0	0	1		+		41897	14792	20513	20602	48482	48482					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4523193240166	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.12	1	114.12	113.62	114.62	0								0	0	0	0.63775	1	49280	49280		0	0	1		+		41898	14792	20513	20602	48483	48483					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4536010622978	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.29	1	114.29	113.79	114.79	0								0	0	0	0.63775	1	49348	49348		0	0	1		+		41899	14792	20513	20602	48484	48484					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4525634646416	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.44	1	114.44	113.94	114.94	0								0	0	0	0.63775	1	49412	49412		0	0	1		+		41900	14792	20513	20602	48485	48485					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4542724490166	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.61	1	114.61	114.11	115.11	0								0	0	0	0.63775	1	49478	49478		0	0	1		+		41901	14792	20513	20602	48486	48486					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4529296755791	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.87	1	114.87	114.37	115.37	0								0	0	0	0.63775	1	49583	49583		0	0	1		+		41902	14792	20513	20602	48487	48487					0.2421059925800364
WKLPLLVVKLI	11	Unmodified	_WKLPLLVVKLI_					0	0	0			REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	REV__tr|A0A553SHF5|A0A553SHF5_NIACISporecortexbiosynthesisproteinYabQOS=NialliacirculansOX=1397GN=yabQPE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.4548217654228	2	661.452134	1320.88972	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.47	1	115.47	114.97	115.97	0								0	0	0	0.63775	1	49829	49829		0	0	1		+		41903	14792	20513	20602	48488	48488					0.2421059925800364
WKLQWMLILLR	11	Unmodified	_WKLQWMLILLR_					0	0	0		ENST00000272793.9_1_2:170814982-170843277:+|nuORF	ENST00000272793.9_1_2:170814982-170843277:+|nuORF	ENST00000272793.9_1_2:170814982-170843277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	750.4526244997978	2	750.4496	1498.88465	2.7221	0.0020428	0.025794	1.9357E-05	2.7479	0.0020622	750.4497753774127	85.184	1.2862	86.781	86.401	87.687	1.5962					186	52	5	0	0	0	1.0405	8	35634	35634;35698;35752;35817;35881;35932;35985;36050		0	0	1	134240000			41904	5681	20514	20603	48489;48490;48491;48492;48493;48494;48495;48496	48489					0.15515972123716892
WKLRPLKRLNR	11	Unmodified	_WKLRPLKRLNR_					0	0	0		ENSG00000140939|ENST00000568146|NOL3	ENSG00000140939|ENST00000568146|NOL3	ENSG00000140939|ENST00000568146|NOL3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	371.1011230349541	4	370.740031	1478.93102	-0.92326	-0.00034229	2.0081	0.00074448	1.0848	0.00040218	370.74074764104375	34.275	0.29931	34.275	34.1	34.4	0					14	9	2	0	0	0	0.14606	1	14312	14312		0	0	1	692520			41905	2940	20515	20604	48497	48497					0.21071173070026816
WKLTRETW	8	Unmodified	_WKLTRETW_					0	0	0		COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.3029052615166	2	560.300916	1118.58728	0.7554	0.00042325	2.8972	0.0016233	3.6526	0.0020466	560.3023296480809	108.52	0.22059	108.52	108.38	108.6	0					34	9	4	0	0	0	0.89008	1	46726	46726		2.5775	0.51773	1	235340000			41906	324	20516	20605	48498	48498					0.032728515714552486
WKLTRETW	8	Unmodified	_WKLTRETW_					0	0	0		COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	COMP|p.D670Lfs*?|1|0.16|ENSG00000105664|chr19:18784270-18784271|-/AA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3033935427666	2	560.300916	1118.58728	2.6764	0.0014996	0.95714	0.00053628	3.6336	0.0020359	560.3011951406661	108.48	0.21723	108.53	108.4	108.62	0.050652					45	12	4	0	0	0	0.89008	1	46598	46598		2.5775	0.51773	1	443460000			41907	324	20516	20605	48499	48499					0.032728515714552486
WKLYRAQR	8	Unmodified	_WKLYRAQR_					0	0	0		tr|A0A553SM29|A0A553SM29_NIACIPhosphoenolpyruvatecarboxylaseOS=NialliacirculansOX=1397GN=ppcPE=3SV=1	tr|A0A553SM29|A0A553SM29_NIACIPhosphoenolpyruvatecarboxylaseOS=NialliacirculansOX=1397GN=ppcPE=3SV=1	tr|A0A553SM29|A0A553SM29_NIACIPhosphoenolpyruvatecarboxylaseOS=NialliacirculansOX=1397GN=ppcPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	374.2184631228447	3	374.217325	1119.63015	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.434	1	93.434	92.934	93.934	0								0	0	0	1.0178	1	39051	39051		0.40072	0.16487	1				41908	16363	20517	20606	48500	48500					0.07511666419554786
WKNREPLVK	9	Unmodified	_WKNREPLVK_					0	0	0		nc|ENSG00000175193|Q9H300-2|PARL;ENSG00000175193|ENST00000317096|PARL;PIK3R4-PARL|2|fusion;PIK3R4-PARL|1|fusion	nc|ENSG00000175193|Q9H300-2|PARL	nc|ENSG00000175193|Q9H300-2|PARL	MSMS	GG20161007_CRH_Patient100_A02_01	1	585.3406249880791	2	585.343115	1168.67168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.753	1	98.753	98.253	99.253	0								0	0	0	0.42693	1	41314	41314		0.52476	0	1				41909	4359	20518	20607	48501	48501					0.09408802388202275
WKPAKLIWTL	10	Unmodified	_WKPAKLIWTL_					0	0	0			REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3838378787041	2	628.381709	1254.74886	2.0785	0.0013061	1.4342	0.00090123	3.5128	0.0022073	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.89803	1	33278	33278		1.4819	0.8804	1	6184900	+		41910	12736	20519	20608	48502	48502					0.1316802060455302
WKPAKLIWTL	10	Unmodified	_WKPAKLIWTL_					0	0	0			REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3834106326103	2	628.381709	1254.74886	2.0099	0.001263	1.8396	0.0011559	3.8495	0.0024189	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	0.89803	1	32324	32324		1.4819	0.15237	1	2978200	+		41911	12736	20519	20608	48503	48503					0.1316802060455302
WKPAKLIWTL	10	Unmodified	_WKPAKLIWTL_					0	0	0			REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3833495974541	2	628.381709	1254.74886	1.5916	0.0010001	0.70974	0.00044598	2.3013	0.0014461	628.3820972907522	78.873	0.64691	79.182	78.641	79.288	0.30933					37	20	2	0	0	0	0.89803	1	32858	32858		1.4819	0.8804	1	5235200	+		41912	12736	20519	20608	48504	48504					0.1316802060455302
WKPAKLIWTL	10	Unmodified	_WKPAKLIWTL_					0	0	0			REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	REV__ENST00000378024.8_2_11:62290097-62290190:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	628.3834106326103	2	628.381709	1254.74886	2.2248	0.001398	1.7777	0.0011171	4.0025	0.0025151	628.3833454129444	75.799	1.1962	77.567	76.963	78.159	1.7672					65	38	3	0	0	0	0.89803	1	31739	31739		1.4819	0.15237	1	2262400	+		41913	12736	20519	20608	48505	48505					0.1316802060455302
WKPGSVLL	8	Unmodified	_WKPGSVLL_					0	0	0		ENSG00000205221|ENST00000379242|VIT	ENSG00000205221|ENST00000379242|VIT	ENSG00000205221|ENST00000379242|VIT	MSMS	GG20161007_CRH_Patient100_A02_01	1	450.2704650759697	2	450.271096	898.527639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.02	1	102.02	101.52	102.52	0								0	0	0	1.0178	1	42728	42728		0.79363	0	1				41914	5175	20520	20609	48506	48506					0.07431580628076517
WKPLIDTA	8	Unmodified	_WKPLIDTA_					0	0	0			REV__nc|ENSG00000126602|Q12931-2|TRAP1	REV__nc|ENSG00000126602|Q12931-2|TRAP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1776306033134	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.602	1	88.602	88.102	89.102	0								0	0	0	1.0178	1	37042	37042		1.4819	0	1		+		41915	9698	20521	20610	48507	48507					0.043909729028428046
WKPLIDTA	8	Unmodified	_WKPLIDTA_					0	0	0			REV__nc|ENSG00000126602|Q12931-2|TRAP1	REV__nc|ENSG00000126602|Q12931-2|TRAP1	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1780883669853	3	315.179766	942.517468	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.756	1	88.756	88.256	89.256	0								0	0	0	1.0178	1	37107	37107		1.4819	0	1		+		41916	9698	20521	20610	48508	48508					0.043909729028428046
WKPLRSPL	8	Unmodified	_WKPLRSPL_					0	0	0			REV__ENSG00000125810|ENST00000246006|CD93	REV__ENSG00000125810|ENST00000246006|CD93	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	332.8719360232353	3	332.871155	995.591636	0.21366	7.112E-05	1.7436	0.0005804	1.9573	0.00065152	332.87189799765605	37.735	0.477	39.556	39.224	39.701	1.8202					70	15	5	0	0	0	0.8873	1	15724	15724		2.9952	0	1	326050000	+		41917	9680	20522	20611	48509	48509					0.09366360785031702
WKPNSFEPN	9	Unmodified	_WKPNSFEPN_					0	0	0			REV__tr|A0A7D7A106|A0A7D7A106_9CLOTUracilpermeaseOS=ClostridiumintestinaleOX=36845GN=uraAPE=3SV=1	REV__tr|A0A7D7A106|A0A7D7A106_9CLOTUracilpermeaseOS=ClostridiumintestinaleOX=36845GN=uraAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1118.520068347454	1	1118.52654	1117.51926	3.2251	0.0036074	3.7821	0.0042304	7.0073	0.0078378	1118.5327936648898	95.628	0.12405	96.03	95.961	96.085	0.40208					6	4	2	0	0	0	0.32838	1	40228	40228		24.021	2.2739	1	3719400	+		41918	15818	20523	20612	48510	48510					-0.03480018079198999
WKQLIIKRLR	10	Unmodified	_WKQLIIKRLR_					0	0	0		ENST00000304271.10_2_11:68030296-68030341:-|nuORF	ENST00000304271.10_2_11:68030296-68030341:-|nuORF	ENST00000304271.10_2_11:68030296-68030341:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	339.1770202517509	4	339.226491	1352.87686	1.1951	0.00040542	0.45125	0.00015308	1.6464	0.0005585	339.47720561998847	40.581	0.69128	40.898	40.416	41.108	0.31683					53	21	3	0	0	0	0.12561	1	16887	16887		0	0	1	1543500			41919	5771	20524	20613	48511	48511					0.21453580918455373
WKQWCKMRH	9	Unmodified	_WKQWCKMRH_					0	0	0			REV__ENST00000514030.1_1_5:122153007-122163181:+|nuORF	REV__ENST00000514030.1_1_5:122153007-122163181:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8827087283134	3	434.883072	1301.62739	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2346	1	9.2346	8.7346	9.7346	0								0	0	0	0.42693	1	3801	3801		0.23584	0	1		+		41920	11812	20525	20614	48512	48512					-0.011362483012590019
WKRKHIKKI	9	Unmodified	_WKRKHIKKI_					0	0	0		ENST00000496524.5_1_2:110883202-110883253:-|nuORF	ENST00000496524.5_1_2:110883202-110883253:-|nuORF	ENST00000496524.5_1_2:110883202-110883253:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.9047119021416	2	618.906217	1235.79788	2.9334	0.0018155	-2.7464	-0.0016998	0.18696	0.00011571	618.9042524589477	107.36	0.1907	107.52	107.43	107.62	0.15796					27	9	3	0	0	0	0.85019	1	46150	46150		0.52476	0.12405	1	252530000			41921	6955	20526	20615	48513	48513					0.18941353684181195
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1782104372978	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.689	1	87.689	87.189	88.189	0								0	0	0	1.0178	1	36649	36649		0.40072	0	1				41922	7090	20527	20616	48514	48514					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1781188845634	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.018	1	88.018	87.518	88.518	0								0	0	0	1.0178	1	36793	36793		0.40072	0	1				41923	7090	20527	20616	48515	48515					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1789123415947	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.661	1	89.661	89.161	90.161	0								0	0	0	1.0178	1	37477	37477		0.40072	0	1				41924	7090	20527	20616	48516	48516					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1785766482353	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.484	1	90.484	89.984	90.984	0								0	0	0	1.0178	1	37817	37817		0.40072	0	1				41925	7090	20527	20616	48517	48517					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	315.1786682009697	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.699	1	91.699	91.199	92.199	0								0	0	0	1.0178	1	38321	38321		0.40072	0	1				41926	7090	20527	20616	48518	48518					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1784240603447	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	79.908	1	81.159	80.659	81.659	1.2512								0	0	0	1.0178	1	33541	33541		0.40072	0.050084	1				41927	7090	20527	20616	48519	48519					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1783325076103	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.093	1	81.344	80.844	81.844	1.2512								0	0	0	1.0178	1	33618	33618		0.40072	0.050084	1				41928	7090	20527	20616	48520	48520					0.04122562288569043
WKRPGSGR	8	Unmodified	_WKRPGSGR_					0	0	0		ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	ENST00000522100.5_3_5:150443245-150466684:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	315.1788818240166	3	315.178871	942.514782	NaN	NaN	NaN	NaN	NaN	NaN	NaN	80.242	1	81.493	80.993	81.993	1.2512								0	0	0	1.0178	1	33680	33680		0.40072	0.050084	1				41929	7090	20527	20616	48521	48521					0.04122562288569043
WKRRGWLMIKM	11	Unmodified	_WKRRGWLMIKM_					0	0	0		ENST00000559160.1_2_15:59280096-59296221:+|nuORF	ENST00000559160.1_2_15:59280096-59296221:+|nuORF	ENST00000559160.1_2_15:59280096-59296221:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	752.9246703982353	2	752.923226	1503.8319	1.8932	0.0014254	-2.3744	-0.0017877	-0.48125	-0.00036234	752.9216454402319	64.864	0.60088	65.191	64.947	65.548	0.32688					44	18	3	0	0	0	1.0174	1	27174	27174		2.7352	1.2533	1	1162600			41930	7321	20528	20617	48522	48522					0.10013690789219254
WKRRKLKHLKT	11	Unmodified	_WKRRKLKHLKT_					0	0	0		ENST00000542123.5_1_12:12966350-12967071:+|nuORF	ENST00000542123.5_1_12:12966350-12967071:+|nuORF	ENST00000542123.5_1_12:12966350-12967071:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	747.5181762576103	2	747.480611	1492.94667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.73	1	104.91	104.41	105.41	0.1731								0	0	0	0.63775	1	44387	44387		0	0	1				41931	7220	20529	20618	48523	48523					0.21991459587047757
WKRRLIRLL	9	Unmodified	_WKRRLIRLL_					0	0	0		nc|ENSG00000146833|Q9C037|TRIM4	nc|ENSG00000146833|Q9C037|TRIM4	nc|ENSG00000146833|Q9C037|TRIM4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.4187499880791	2	627.419491	1252.82443	2.8808	0.0018074	-2.872	-0.001802	0.0087206	5.4715E-06	627.4177232398912	107.38	0.22867	107.53	107.41	107.64	0.15781					45	11	5	0	0	0	0.85019	1	46213	46213		0.52476	0.12405	1	860870000			41932	7891	20530	20619	48524	48524					0.20813042575514373
WKRRRWLVR	9	Unmodified	_WKRRRWLVR_					0	0	0			REV__nc|ENSG00000159082|O43426-4|SYNJ1	REV__nc|ENSG00000159082|O43426-4|SYNJ1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	339.4601013064384	4	339.712545	1354.82108	-1.535	-0.00052146	-1.4238	-0.00048368	-2.9588	-0.0010051	339.71201634812275	41.96	0.12364	41.96	41.886	42.01	0					5	3	2	0	0	0	0.11938	1	17562	17562		1.1933	0	1	398950	+		41933	10567	20531	20620	48525	48525					0.1578579252147847
WKRTWTLLWIF	11	Unmodified	_WKRTWTLLWIF_					0	0	0		ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	ENST00000396420.7_1_1:46658257-46658620:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.7326537966728	3	517.294123	1548.86054	4.7922	0.002479	-3.0741	-0.0015902	1.7181	0.00088879	517.6252568556312	86.842	1.1255	88.337	87.984	89.11	1.4953					57	36	2	0	0	0	0.14606	1	36588	36588		0.45452	0.45452	1	1612000			41934	6302	20532	20621	48526	48526					0.10806454961698364
WKSQFKVH	8	Unmodified	_WKSQFKVH_					0	0	0		ENSG00000245680|ENST00000532828|ZNF585B	ENSG00000245680|ENST00000532828|ZNF585B	ENSG00000245680|ENST00000532828|ZNF585B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	530.2924072146416	2	530.290351	1058.56615	2.7421	0.0014541	1.9996	0.0010604	4.7418	0.0025145	530.2911078986756	86.732	0.37497	86.732	86.489	86.864	0					22	13	2	0	0	0	0.89051	1	36166	36166		2.3027	0	1	4603400			41935	5366	20533	20622	48527	48527					0.03920886262608292
WKSRQWRYRPA	11	Unmodified	_WKSRQWRYRPA_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1533.819873034954	1	1533.81858	1532.8113	0.64738	0.00099296	-2.8968	-0.0044431	-2.2494	-0.0034501	1534.814533880987	27.795	0.1863	29.074	28.998	29.184	1.2789					8	5	2	0	0	0	1.0393	1	11686	11686		0.35063	0.35063	1	1380300	+		41936	10488	20534	20623	48528	48528					0.06620559725456587
WKSRQWRYRPA	11	Unmodified	_WKSRQWRYRPA_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1533.81858	1532.8113	0.64738	0.00099296	-2.8968	-0.0044431	-2.2494	-0.0034501	1534.814533880987	27.795	0.1863	29.074	28.998	29.184	1.2789	0	0	NaN	0.35063	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1380300	+		41937	10488	20534	20623							0.06620559725456587
WKTIKAQRW	9	Unmodified	_WKTIKAQRW_					0	0	0		ENST00000370384.7_1_6:74019690-74019876:-|nuORF	ENST00000370384.7_1_6:74019690-74019876:-|nuORF	ENST00000370384.7_1_6:74019690-74019876:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	304.5365783572197	4	304.929192	1215.68766	0.13811	4.2115E-05	2.4997	0.00076223	2.6378	0.00080434	305.18031693828874	24.273	0.43264	25.514	25.268	25.701	1.241					19	13	2	0	0	0	0.1188	1	10216	10216		1.9064	0.71303	1	87027			41938	6114	20535	20624	48529	48529					0.08844508625111303
WKTLQALLS	9	Unmodified	_WKTLQALLS_					0	0	0		ENSG00000188910|ENST00000373366|GJB3	ENSG00000188910|ENST00000373366|GJB3	ENSG00000188910|ENST00000373366|GJB3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	530.9879638552666	2	530.313492	1058.61243	3.4578	0.0018337	-4.3513	-0.0023076	-0.89348	-0.00047382	530.3113357431206	92.96	0.41341	94.237	94.007	94.42	1.277					22	12	2	0	0	0	0.11923	1	39108	39108		1.6526	0.45928	1	735080			41939	4885	20536	20625	48530	48530					0.08546906374044738
WKTLRNIKKH	10	Unmodified	_WKTLRNIKKH_					0	0	0		ENST00000416175.1_1_1:15018653-15018698:-|nuORF	ENST00000416175.1_1_1:15018653-15018698:-|nuORF	ENST00000416175.1_1_1:15018653-15018698:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	331.7069274783134	4	331.705657	1322.79352	1.4128	0.00046864	2.9453	0.00097698	4.3581	0.0014456	331.7065594123919	44.86	0.3451	46.226	46.088	46.433	1.3653					19	10	2	0	0	0	0.89803	1	18774	18774		1.5923	0.26264	1	3241400			41940	6407	20537	20626	48531	48531					0.14503844470573313
WKTRLPEL	8	Unmodified	_WKTRLPEL_					0	0	0		nc|ENSG00000171495|Q7Z745-2|MROH2B;ENSG00000171495|ENST00000399564|MROH2B	nc|ENSG00000171495|Q7Z745-2|MROH2B	nc|ENSG00000171495|Q7Z745-2|MROH2B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2069579958916	3	348.206315	1041.59712	0.8385	0.00029197	0.81089	0.00028236	1.6494	0.00057433	348.2064145238633	32.051	0.95711	32.342	31.66	32.617	0.29086					95	30	4	0	0	0	0.88942	1	13370	13370		2.9952	0.71247	1	7322900			41941	4193	20538	20627	48532	48532					0.07798039576823612
WKTRLPEL	8	Unmodified	_WKTRLPEL_					0	0	0		nc|ENSG00000171495|Q7Z745-2|MROH2B;ENSG00000171495|ENST00000399564|MROH2B	nc|ENSG00000171495|Q7Z745-2|MROH2B	nc|ENSG00000171495|Q7Z745-2|MROH2B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	348.2068359255791	3	348.206315	1041.59712	0.35938	0.00012514	-0.99481	-0.0003464	-0.63543	-0.00022126	348.2051880184925	30.025	1.8628	31.841	30.526	32.388	1.8151					120	60	4	0	0	0	0.88752	1	12698	12698		4.1895	0.86986	1	7605500			41942	4193	20538	20627	48533	48533					0.07798039576823612
WKTTRINRSLS	11	Unmodified	_WKTTRINRSLS_					0	0	0			REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	681.3871948122978	2	681.386042	1360.75753	2.2188	0.0015119	-0.63882	-0.00043528	1.58	0.0010766	681.3855965263492	47.823	0.31295	47.823	47.653	47.966	0					27	9	4	0	0	0	0.42228	1	20001	20001		26.268	1.2772	1	3007700	+		41943	15582	20539	20628	48534	48534					0.09158342503087624
WKTTRINRSLS	11	Unmodified	_WKTTRINRSLS_					0	0	0			REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	REV__tr|A0A7D6W0P1|A0A7D6W0P1_9CLOTGlycosyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00240PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	681.3866454958916	2	681.386042	1360.75753	1.6808	0.0011452	-2.0258	-0.0013804	-0.34506	-0.00023512	681.3854000987993	47.456	0.32622	47.786	47.574	47.9	0.33034					24	10	3	0	0	0	0.34699	1	19928	19928		28.495	3.5035	1	3670800	+		41944	15582	20539	20628	48535	48535					0.09158342503087624
WKVKKIGS	8	Unmodified	_WKVKKIGS_					0	0	0			REV__tr|A0A7D6VY97|A0A7D6VY97_9CLOTtetrahydrofolatesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14960PE=3SV=1	REV__tr|A0A7D6VY97|A0A7D6VY97_9CLOTtetrahydrofolatesynthaseOS=ClostridiumintestinaleOX=36845GN=HZF06_14960PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	316.1756774783134	3	315.867522	944.580737	0.70538	0.00022281	-3.0502	-0.00096345	-2.3448	-0.00074064	315.86661252568433	46.059	1.3723	48.03	47.157	48.529	1.9703					67	43	2	0	0	0	2.3239	1	19152	19152		0.45834	0	1	4567200	+		41945	15558	20540	20629	48536	48536					0.10622958410749561
WKVLWLPK	8	Unmodified	_WKVLWLPK_					0	0	0			REV__nc|ENSG00000134193|Q9BYZ8-2|REG4	REV__nc|ENSG00000134193|Q9BYZ8-2|REG4	MSMS	GG20161007_CRH_Patient100_A02_02	2	357.2238952517509	3	357.223417	1068.64842	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.055	1	21.266	20.766	21.766	0.21024								0	0	0	1.0178	1	8746	8746		0.40072	0	1		+		41946	14438	20541	20630	48537	48537					0.11684408341534436
WKWRHRRARKV	11	Unmodified	_WKWRHRRARKV_					0	0	0			REV__ENSG00000100422|ENST00000216264|CERK	REV__ENSG00000100422|ENST00000216264|CERK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	395.4887267947197	4	395.489277	1577.928	0.35078	0.00013873	-0.95077	-0.00037602	-0.59999	-0.00023729	395.4888317521558	22.645	0.4833	24.296	23.984	24.467	1.6511					26	15	3	0	0	0	1.0405	2	9414	9414;9448		0	0	1	839520	+		41947	8989	20542	20631	48538;48539	48538					0.16215342735836202
WLAEKLPTL	9	Unmodified	_WLAEKLPTL_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.8173705935478	2	535.815867	1069.61718	2.1479	0.0011509	0.81306	0.00043565	2.961	0.0015865	535.8161698767683	61.237	0.5313	61.567	61.203	61.735	0.32974					38	16	3	0	0	0	0.070055	1	25672	25672		60.074	25.672	1	2436900			41948	4361	20543	20632	48540	48540					0.08515790516798916
WLAEKLPTL	9	Unmodified	_WLAEKLPTL_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.8165771365166	2	535.815867	1069.61718	2.6327	0.0014106	0.74685	0.00040017	3.3796	0.0018108	535.8152113658093	60.026	0.6664	61.445	61.02	61.687	1.4196					52	21	3	0	0	0	0.010585	2	25146	25146;25199		106.94	53.107	1	11622000			41949	4361	20543	20632	48541;48542	48541					0.08515790516798916
WLAEKLPTL	9	Unmodified	_WLAEKLPTL_					0	0	0		nc|ENSG00000175216|Q14008-2|CKAP5;ENSG00000175216|ENST00000529230|CKAP5;nc|ENSG00000175216|Q14008-3|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	nc|ENSG00000175216|Q14008-2|CKAP5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.8165161013603	2	535.815867	1069.61718	2.9622	0.0015872	0.24314	0.00013028	3.2053	0.0017175	535.8149614750761	59.53	0.57191	61.499	61.131	61.703	1.969					47	18	3	0	0	0	0.019486	3	25010	24911;24960;25010		99.755	55.897	1	11445000			41950	4361	20543	20632	48543;48544;48545	48545					0.08515790516798916
WLAIDMSFE	9	Unmodified	_WLAIDMSFE_					0	0	0		nc|ENSG00000159110|P48551-3|IFNAR2;nc|ENSG00000159110|P48551-2|IFNAR2;ENSG00000159110|ENST00000342136|IFNAR2	nc|ENSG00000159110|P48551-3|IFNAR2	nc|ENSG00000159110|P48551-3|IFNAR2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	371.1019775271416	3	371.175804	1110.50558	1.2771	0.00047404	1.4871	0.00055199	2.7643	0.001026	371.1761195810865	85.004	0.24583	86.163	85.995	86.241	1.159					12	7	2	0	0	0	0.11941	1	35660	35660		1.0715	0.67075	1	912260			41951	3515	20544	20633	48546	48546					-0.04525011902637743
WLARRLSYVLF	11	Unmodified	_WLARRLSYVLF_					0	0	0		ENSG00000119927|ENST00000348367|GPAM	ENSG00000119927|ENST00000348367|GPAM	ENSG00000119927|ENST00000348367|GPAM	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	475.9619628787041	3	475.278473	1422.81359	1.5389	0.00073139	1.5261	0.00072534	3.065	0.0014567	475.2794980996571	50.789	0.78943	52.183	51.831	52.621	1.3938					42	25	3	0	0	0	0.14606	1	21417	21417		3.5927	0.96144	1	3368000			41952	2093	20545	20634	48547	48547					0.11909595410565998
WLDETLAQV	9	Unmodified	_WLDETLAQV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	537.7779418826103	2	537.776939	1073.53933	1.7945	0.00096503	0.26136	0.00014055	2.0558	0.0011056	537.7771352619834	64.588	0.32274	64.588	64.43	64.753	0					16	9	2	0	0	0	0.20244	1	26921	26921		44.407	23.953	1	1173700			41953	3106	20546	20635	48548	48548					0.005497328607589225
WLDETLAQV	9	Unmodified	_WLDETLAQV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	537.7797729372978	2	537.776939	1073.53933	1.9594	0.0010537	0.18776	0.00010097	2.1471	0.0011547	537.7769751115583	64.265	0.35368	64.594	64.401	64.755	0.32899					21	10	3	0	0	0	0.15456	1	26894	26894		50.855	18.55	1	1295600			41954	3106	20546	20635	48549	48549					0.005497328607589225
WLDETLAQV	9	Unmodified	_WLDETLAQV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	537.7773925662041	2	537.776939	1073.53933	3.0143	0.001621	-0.53566	-0.00028807	2.4786	0.0013329	537.7762639437052	63.159	0.53139	64.572	64.344	64.876	1.4134					46	16	4	0	0	0	0.075994	2	26459	26459;26507		74.423	22.154	1	7447300			41955	3106	20546	20635	48550;48551	48550					0.005497328607589225
WLDETLAQV	9	Unmodified	_WLDETLAQV_					0	0	0		nc|ENSG00000145332|Q9P2G9-2|KLHL8;ENSG00000145332|ENST00000273963|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	nc|ENSG00000145332|Q9P2G9-2|KLHL8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	537.7774536013603	2	537.776939	1073.53933	2.8295	0.0015216	0.5337	0.00028701	3.3632	0.0018086	537.7769936023664	62.665	0.46923	64.609	64.375	64.845	1.9444					48	14	4	0	0	0	0.075994	2	26265	26265;26316		74.423	24.376	1	8726700			41956	3106	20546	20635	48552;48553	48552					0.005497328607589225
WLDGKIIAV	9	Unmodified	_WLDGKIIAV_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.8023864626884	2	507.80276	1013.59097	2.2991	0.0011675	-1.9792	-0.0010051	0.31985	0.00016242	507.8017891533067	59.852	0.35754	59.852	59.682	60.039	0					29	12	3	0	0	0	0.026734	2	24968	24926;24968		92.653	27.418	1	6920000			41957	1605	20547	20636	48554;48555	48555					0.08471521345325073
WLDGKIIAV	9	Unmodified	_WLDGKIIAV_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.8026611208916	2	507.80276	1013.59097	2.683	0.0013624	-2.2497	-0.0011424	0.43327	0.00022001	507.8015531371797	59.263	0.40099	59.588	59.407	59.808	0.32553					45	21	3	0	0	0	0.0049178	3	24839	24801;24839;24884		122.18	40.566	1	10595000			41958	1605	20547	20636	48556;48557;48558	48557					0.08471521345325073
WLDGKIIAV	9	Unmodified	_WLDGKIIAV_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.8032104372978	2	507.80276	1013.59097	0.93519	0.00047489	-0.40157	-0.00020392	0.53362	0.00027097	507.80270177239964	58.036	0.38375	59.454	59.339	59.722	1.4181					32	15	3	0	0	0	0.02878	2	24343	24302;24343		89.401	30.261	1	21743000			41959	1605	20547	20636	48559;48560	48560					0.08471521345325073
WLDGKIIAV	9	Unmodified	_WLDGKIIAV_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.8022949099541	2	507.80276	1013.59097	0.52826	0.00026825	-1.1849	-0.0006017	-0.65665	-0.00033345	507.80234016539526	57.488	0.30037	59.456	59.327	59.627	1.9684					40	16	3	0	0	0	0.026734	2	24130	24090;24130		92.653	31.296	1	20394000			41960	1605	20547	20636	48561;48562	48562					0.08471521345325073
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	523.7806274294853	2	523.779482	1045.54441	2.163	0.001133	0.0054459	2.8525E-06	2.1685	0.0011358	523.7795734569652	63.998	0.4998	63.998	63.802	64.302	0					47	15	4	0	0	0	0.031324	3	26685	26641;26685;26724		85.357	45.341	1	15639000			41961	1093	20548	20637	48563;48564;48565	48564					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1046.555590808392	1	1046.55169	1045.54441	2.0105	0.0021041	1.4594	0.0015273	3.4698	0.0036313	1046.5535046716352	64.063	0.34396	64.063	63.862	64.206	0					22	10	3	0	0	0	0.059546	2	26715	26667;26715		64.236	28.109	1	1337200			41962	1093	20548	20637	48566;48567	48567					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	523.7805053591728	2	523.779482	1045.54441	2.0739	0.0010863	-1.2255	-0.00064191	0.84835	0.00044435	523.7789398001314	63.634	0.51649	63.963	63.725	64.241	0.32899					53	16	4	0	0	0	0.031324	4	26602	26602;26647;26697;26757		85.357	41.584	1	23576000			41963	1093	20548	20637	48568;48569;48570;48571	48568					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1046.551684558392	1	1046.55169	1045.54441	2.4294	0.0025425	-1.2802	-0.0013398	1.1492	0.0012027	1046.5508237988863	63.636	0.35937	63.965	63.756	64.115	0.32899					19	11	2	0	0	0	0.059546	2	26675	26627;26675		64.236	27.73	1	1707800			41964	1093	20548	20637	48572;48573	48573					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.7811157107353	2	523.779482	1045.54441	2.9938	0.0015681	-0.82978	-0.00043462	2.164	0.0011335	523.7791928218006	62.558	0.54666	63.972	63.679	64.226	1.4134					61	17	5	0	0	0	0.026628	3	26208	26161;26208;26260		92.822	42.889	1	88725000			41965	1093	20548	20637	48574;48575;48576	48575					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1046.553637683392	1	1046.55169	1045.54441	2.8043	0.0029349	-0.72302	-0.00075667	2.0813	0.0021782	1046.5513155951319	62.557	0.38779	63.97	63.743	64.131	1.4134					48	12	5	0	0	0	0.019432	2	26241	26189;26241		99.799	35.838	1	6933900			41966	1093	20548	20637	48577;48578	48578					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.7805053591728	2	523.779482	1045.54441	2.9528	0.0015466	-0.88592	-0.00046402	2.0669	0.0010826	523.7791452483958	61.997	0.63905	63.954	63.689	64.328	1.9571					63	20	5	0	0	0	0.031324	4	25999	25953;25999;26050;26092		85.357	40.021	1	57666000			41967	1093	20548	20637	48579;48580;48581;48582	48580					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1046.554125964642	1	1046.55169	1045.54441	3.9704	0.0041552	-2.1347	-0.002234	1.8357	0.0019212	1046.5499121336388	61.996	0.36852	63.953	63.751	64.12	1.9571					36	11	4	0	0	0	0.023786	2	26027	25980;26027		96.285	33.712	1	6283700			41968	1093	20548	20637	48583;48584	48584					0.023460367233838042
WLDSVVTQV	9	Unmodified	_WLDSVVTQV_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2	nc|ENSG00000087903|P48378-2|RFX2	nc|ENSG00000087903|P48378-2|RFX2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	523.779482	1045.54441	3.0376	0.0015911	-1.5961	-0.00083599	1.4416	0.00075506	523.7805712178197	62.903	0.21393	64.317	64.162	64.376	1.4134	0.22389	-0.0010051	NaN	85.357	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	329240			41969	1093	20548	20637							0.023460367233838042
WLFRRPRAKHL	11	Unmodified	_WLFRRPRAKHL_					0	0	0		SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	493.9656249880791	3	493.965112	1478.87351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.0908	1	4.1928	3.6928	4.6928	0.10199								0	0	0	0.63775	1	1690	1690		0	0	1				41970	15960	20549	20638	48585	48585					0.1532233086445558
WLFRRPRAKHL	11	Unmodified	_WLFRRPRAKHL_					0	0	0		SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	SLC2A7|p.L456Sfs*22|1|0.09|ENSG00000197241|chr1:9003473-9003473|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	493.9643127322197	3	493.965112	1478.87351	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.4106	1	4.4986	3.9986	4.9986	0.08803								0	0	0	0.63775	1	1823	1823		0.094841	0	1				41971	15960	20549	20638	48586	48586					0.1532233086445558
WLGKLLKI	8	Unmodified	_WLGKLLKI_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_A02_01	1	324.2191955447197	3	324.219784	969.637523	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.302	1	96.302	95.802	96.802	0								0	0	0	1.0178	1	40259	40259		0.40072	0	1		+		41972	9194	20550	20639	48587	48587					0.15149005967271023
WLGKQRPL	8	Unmodified	_WLGKQRPL_					0	0	0		tr|A0A553SQP9|A0A553SQP9_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_08050PE=4SV=1;tr|A0A553SQP2|A0A553SQP2_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_07070PE=4SV=1	tr|A0A553SQP9|A0A553SQP9_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_08050PE=4SV=1	tr|A0A553SQP9|A0A553SQP9_NIACIDUF3231familyproteinOS=NialliacirculansOX=1397GN=CEQ21_08050PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	499.3024474978447	2	499.300719	996.586885	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.294	1	90.294	89.794	90.794	0								0	0	0	1.0178	1	37736	37736		2.5775	0	1				41973	16523	20551	20640	48588	48588					0.08845476642261474
WLGRQRLRH	9	Unmodified	_WLGRQRLRH_					0	0	0			REV__ENST00000528797.5_1_11:57413095-57413371:-|nuORF	REV__ENST00000528797.5_1_11:57413095-57413371:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	611.3569824099541	2	611.357422	1220.70029	1.9698	0.0012043	-1.0287	-0.00062888	0.94115	0.00057538	611.3566402316326	77.022	2.1695	77.338	76.479	78.648	0.31653					134	68	3	0	0	0	0.84963	1	32078	32078		0.6015	0	1	3044900	+		41974	13687	20552	20641	48589	48589					0.09876964808017874
WLIEDGKVV	9	Unmodified	_WLIEDGKVV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.8006469607353	2	529.797675	1057.5808	1.9184	0.0010163	3.2953	0.0017458	5.2137	0.0027622	529.8000862911638	48.024	0.50229	49.412	49.147	49.65	1.388					24	15	2	0	0	0	0.25667	1	20100	20100		27.629	6.7576	1	1098600			41975	6535;76	20553	20642	48590	48590					0.054309136201027286
WLIEDGKVV	9	Unmodified	_WLIEDGKVV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.3041869997978	2	529.797675	1057.5808	2.7476	0.0014557	2.4081	0.0012758	5.1557	0.0027315	529.7999763991963	47.536	0.3691	49.512	49.374	49.743	1.976					20	11	2	0	0	0	0.32838	1	19906	19906		24.021	4.7636	1	1075200			41976	6535;76	20553	20642	48591	48591					0.054309136201027286
WLIEDGKVVTV	11	Unmodified	_WLIEDGKVVTV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	630.3545410037041	2	629.855721	1257.69689	2.0487	0.0012904	-2.1123	-0.0013304	-0.063647	-4.0088E-05	630.3545093542072	55.974	0.19643	56.294	56.195	56.391	0.32088					10	6	2	0	0	0	0.1806	1	23452	23452		57.108	28.026	1	956030			41977	6535;76	20554	20643	48592	48592					0.07834812400142255
WLIEDGKVVTV	11	Unmodified	_WLIEDGKVVTV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.8567382693291	2	629.855721	1257.69689	1.3394	0.00084364	-0.39796	-0.00025066	0.94146	0.00059298	629.8556265304685	54.82	0.26887	56.225	56.06	56.328	1.4048					19	8	3	0	0	0	0.1369	1	22952	22952		67.081	36.444	1	3156800			41978	6535;76	20554	20643	48593	48593					0.07834812400142255
WLIEDGKVVTV	11	Unmodified	_WLIEDGKVVTV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.8564941287041	2	629.855721	1257.69689	1.587	0.00099957	0.93054	0.00058611	2.5175	0.0015857	629.8561033455966	54.343	0.27872	56.312	56.16	56.439	1.9684					15	8	2	0	0	0	0.039841	1	22770	22770		93.938	63.302	1	1844800			41979	6535;76	20554	20643	48594	48594					0.07834812400142255
WLIEDGKVVTV	11	Unmodified	_WLIEDGKVVTV_					0	0	0		ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ENSG00000090273|ENST00000321265|NUDC;ARID1A-NUDC|1|fusion;ARID1A-NUDC|2|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF;ARID1A-NUDC|1|fusion	ENST00000437039.1_1_2:179319678-179320041:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	629.855721	1257.69689	2.1667	0.0013647	0.95669	0.00060258	3.1233	0.0019673	629.8567369925406	56.428	0.23267	56.428	56.313	56.546	0	0.11358	0.00071243	NaN	93.938	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	743130			41980	6535;76	20554	20643							0.07834812400142255
WLILLVILLNI	11	Unmodified	_WLILLVILLNI_					0	0	0		nc|ENSG00000180745|Q8NCR9-2|CLRN3;ENSG00000180745|ENST00000368671|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9442626833916	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.089	1	23.089	22.589	23.589	0								0	0	0	0.63775	1	9621	9621		0.35063	0	1				41981	4554	20555	20644	48595	48595					0.22566893021098622
WLILLVILLNI	11	Unmodified	_WLILLVILLNI_					0	0	0		nc|ENSG00000180745|Q8NCR9-2|CLRN3;ENSG00000180745|ENST00000368671|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9450561404228	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.24	1	23.24	22.74	23.74	0								0	0	0	0.63775	1	9686	9686		0.35063	0	1				41982	4554	20555	20644	48596	48596					0.22566893021098622
WLILLVILLNI	11	Unmodified	_WLILLVILLNI_					0	0	0		nc|ENSG00000180745|Q8NCR9-2|CLRN3;ENSG00000180745|ENST00000368671|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	nc|ENSG00000180745|Q8NCR9-2|CLRN3	MSMS	GG20161007_CRH_Patient100_A02_01	1	661.9462158083916	2	661.944142	1321.87373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.505	1	26.505	26.005	27.005	0								0	0	0	0.63775	1	11072	11072		0.35063	0	1				41983	4554	20555	20644	48597	48597					0.22566893021098622
WLKVYYYRFVI	11	Unmodified	_WLKVYYYRFVI_					0	0	0		ENST00000472871.1_1_13:95120883-95131509:-|nuORF	ENST00000472871.1_1_13:95120883-95131509:-|nuORF	ENST00000472871.1_1_13:95120883-95131509:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	516.8140746951103	3	517.290379	1548.84931	3.5511	0.001837	1.7813	0.00092145	5.3324	0.0027584	517.624738530651	91.322	1.8419	92.688	91.929	93.771	1.366					104	57	3	0	0	0	0.14606	1	38210	38210		0.094841	0.094841	1	1354900			41984	6761	20556	20645	48598	48598					0.096836328675181
WLLCFIFTV	9	Unmodified	_WLLCFIFTV_					0	0	0		ENST00000496331.1_1_20:4854564-4866632:-|nuORF;ENST00000468355.5_1_20:4850526-4913271:-|nuORF;nc|ENSG00000089057|Q9UGH3-2|SLC23A2;ENSG00000089057|ENST00000338244|SLC23A2	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.3083984255791	2	571.309364	1140.60417	1.6296	0.00093099	-2.9906	-0.0017085	-1.361	-0.00077754	571.3074055665752	74.95	0.40753	74.95	74.777	75.185	0					17	12	2	0	0	0	0.54523	1	31216	31216		13.508	0.46542	1	580160			41985	1116	20557	20646	48599	48599					0.03949636133052081
WLLCFIFTV	9	Unmodified	_WLLCFIFTV_					0	0	0		ENST00000496331.1_1_20:4854564-4866632:-|nuORF;ENST00000468355.5_1_20:4850526-4913271:-|nuORF;nc|ENSG00000089057|Q9UGH3-2|SLC23A2;ENSG00000089057|ENST00000338244|SLC23A2	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.3071777224541	2	571.309364	1140.60417	2.4472	0.0013981	-3.4822	-0.0019894	-1.035	-0.0005913	571.3072293129223	74.321	0.31659	74.645	74.486	74.802	0.32464					18	9	3	0	0	0	0.41943	1	31077	31077		19.439	3.2899	1	539310			41986	1116	20557	20646	48600	48600					0.03949636133052081
WLLCFIFTV	9	Unmodified	_WLLCFIFTV_					0	0	0		ENST00000496331.1_1_20:4854564-4866632:-|nuORF;ENST00000468355.5_1_20:4850526-4913271:-|nuORF;nc|ENSG00000089057|Q9UGH3-2|SLC23A2;ENSG00000089057|ENST00000338244|SLC23A2	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.3090087771416	2	571.309364	1140.60417	3.5115	0.0020062	-2.8957	-0.0016544	0.61579	0.0003518	571.307412778969	73.161	0.40834	74.491	74.288	74.696	1.3298					27	12	3	0	0	0	0.41943	2	30690	30690;30740		19.439	3.2899	1	1733500			41987	1116	20557	20646	48601;48602	48601					0.03949636133052081
WLLCFIFTV	9	Unmodified	_WLLCFIFTV_					0	0	0		ENST00000496331.1_1_20:4854564-4866632:-|nuORF;ENST00000468355.5_1_20:4850526-4913271:-|nuORF;nc|ENSG00000089057|Q9UGH3-2|SLC23A2;ENSG00000089057|ENST00000338244|SLC23A2	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	ENST00000496331.1_1_20:4854564-4866632:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.3097411990166	2	571.309364	1140.60417	2.7094	0.0015479	-2.3105	-0.00132	0.39891	0.0002279	571.3078484519184	72.547	0.3775	74.357	74.261	74.639	1.8101					27	11	3	0	0	0	0.41943	1	30493	30493		19.439	3.2899	1	2141400			41988	1116	20557	20646	48603	48603					0.03949636133052081
WLLHLTTMKT	10	Unmodified	_WLLHLTTMKT_					0	0	0		ENST00000421767.1_1_7:65844813-65844939:-|nuORF	ENST00000421767.1_1_7:65844813-65844939:-|nuORF	ENST00000421767.1_1_7:65844813-65844939:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	622.3473388552666	2	622.347009	1242.67946	3.2406	0.0020168	-1.8926	-0.0011779	1.348	0.00083891	622.3458638123129	90.743	0.57442	92.108	91.864	92.438	1.366					65	17	5	0	0	0	0.80568	1	38202	38202		11.64	0.84079	1	32754000			41989	6447	20558	20647	48604	48604					0.0678319359346915
WLLLKITEFF	10	Unmodified	_WLLLKITEFF_					0	0	0			REV__ENSG00000115446|ENST00000357765|UNC50	REV__ENSG00000115446|ENST00000357765|UNC50	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	655.3871337771416	2	655.381374	1308.7482	3.2726	0.0021448	2.5299	0.001658	5.8024	0.0038028	655.3825315034384	82.484	1.4639	84.154	83.11	84.574	1.67					100	46	4	0	0	0	0.89803	1	34640	34640		1.6526	0.32309	1	4909200	+		41990	9438	20559	20648	48605	48605					0.10617181164820977
WLLRKRKRRG	10	Unmodified	_WLLRKRKRRG_					0	0	0			REV__ENST00000507297.5_1_5:138855946-138856952:-|nuORF	REV__ENST00000507297.5_1_5:138855946-138856952:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	684.9447509646416	2	684.944196	1367.87384	2.8331	0.0019405	-1.2193	-0.00083512	1.6138	0.0011054	684.9430974419187	107.26	0.17038	107.42	107.32	107.49	0.15781					29	8	4	0	0	0	0.89803	1	46062	46062		0.45834	0.057624	1	76194000	+		41991	13546	20560	20649	48606	48606					0.20461750584286165
WLLRKRKRRG	10	Unmodified	_WLLRKRKRRG_					0	0	0			REV__ENST00000507297.5_1_5:138855946-138856952:-|nuORF	REV__ENST00000507297.5_1_5:138855946-138856952:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	684.9453002810478	2	684.944196	1367.87384	2.7128	0.0018581	-1.2638	-0.00086566	1.4489	0.00099245	684.9430652856395	107.25	0.1938	107.41	107.29	107.49	0.15795					28	9	4	0	0	0	0.89803	1	46011	46011		0.45834	0	1	43043000	+		41992	13546	20560	20649	48607	48607					0.20461750584286165
WLLYPLILALS	11	Unmodified	_WLLYPLILALS_					0	0	0		ENST00000380087.6_1_X:16862980-16863112:-|nuORF	ENST00000380087.6_1_X:16862980-16863112:-|nuORF	ENST00000380087.6_1_X:16862980-16863112:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	651.3974487185478	2	651.397025	1300.7795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.05	1	104.21	103.71	104.71	0.16055								0	0	0	0.63775	1	44009	44009		2.9952	1.6657	1				41993	6218	20561	20650	48608	48608					0.14113754198979223
WLMDLLVPN	9	Unmodified	_WLMDLLVPN_					0	0	0			REV__ENSG00000274736|ENST00000615050|CCL23	REV__ENSG00000274736|ENST00000615050|CCL23	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2388183474541	2	550.794078	1099.5736	3.0663	0.0016889	1.626	0.00089557	4.6923	0.0025845	551.2982257399029	62.238	0.51086	64.195	63.877	64.388	1.9571					28	16	2	0	0	0	0.11812	1	26054	26054		2.0598	1.535	1	1942300	+		41994	12014	20562	20651	48609	48609					0.027798577480325548
WLMDLLVPN	9	Unmodified	_WLMDLLVPN_					0	0	0			REV__ENSG00000274736|ENST00000615050|CCL23	REV__ENSG00000274736|ENST00000615050|CCL23	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	550.794078	1099.5736	2.7399	0.0015091	3.748	0.0020644	6.4879	0.0035735	551.298077998324	62.836	0.50833	64.25	63.899	64.407	1.4134	0.027503	0.00097313	NaN	2.0598	37	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1327700	+		41995	12014	20562	20651							0.027798577480325548
WLMWRRWLT	9	Unmodified	_WLMWRRWLT_					0	0	0			REV__ENST00000549488.5_1_12:53693918-53699773:+|nuORF	REV__ENST00000549488.5_1_12:53693918-53699773:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9111816287041	3	449.909615	1346.70702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.94	110.44	111.44	0.15228								0	0	0	0.42693	1	48033	48033		0	0	1		+		41996	13821	20563	20652	48610	48610					0.047531416443916896
WLMWRRWLT	9	Unmodified	_WLMWRRWLT_					0	0	0			REV__ENST00000549488.5_1_12:53693918-53699773:+|nuORF	REV__ENST00000549488.5_1_12:53693918-53699773:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9108459353447	3	449.909615	1346.70702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.08	1	111.23	110.73	111.73	0.15038								0	0	0	0.42693	1	48151	48151		0	0	1		+		41997	13821	20563	20652	48611	48611					0.047531416443916896
WLNGMRSK	8	Unmodified	_WLNGMRSK_					0	0	0		tr|A0A7D6VSP1|A0A7D6VSP1_9CLOTProteinadenylyltransferaseSelOOS=ClostridiumintestinaleOX=36845GN=selOPE=3SV=1	tr|A0A7D6VSP1|A0A7D6VSP1_9CLOTProteinadenylyltransferaseSelOOS=ClostridiumintestinaleOX=36845GN=selOPE=3SV=1	tr|A0A7D6VSP1|A0A7D6VSP1_9CLOTProteinadenylyltransferaseSelOOS=ClostridiumintestinaleOX=36845GN=selOPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	496.2610656619072	2	496.260736	990.50692	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.741	1	29.517	29.017	30.017	1.7754								0	0	0	1.0178	1	11611	11611		2.8892	0	1				41998	16878	20564	20653	48612	48612					0.011286669767741841
WLPFGLFVV	9	Unmodified	_WLPFGLFVV_					0	0	0		ENST00000449470.6_3_4:39459222-39459833:-|nuORF	ENST00000449470.6_3_4:39459222-39459833:-|nuORF	ENST00000449470.6_3_4:39459222-39459833:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	538.8094360232353	2	539.310221	1076.60589	1.5521	0.00083705	-0.46749	-0.00025212	1.0846	0.00058493	539.309005961781	72.072	0.18868	72.072	71.953	72.142	0					8	5	2	0	0	0	0.116	1	29993	29993		9.3474	0	1	967540			41999	6599	20565	20654	48613	48613					0.07065013213309612
WLQDQIQTV	9	Unmodified	_WLQDQIQTV_					0	0	0		ENSG00000113966|ENST00000463745|ARL6	ENSG00000113966|ENST00000463745|ARL6	ENSG00000113966|ENST00000463745|ARL6	MSMS	GG20161007_CRH_Patient100_W632_01	3	565.7972900271416	2	565.795663	1129.57677	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.168	1	51.559	51.059	52.059	1.3911								0	0	0	0.041996	1	20998	20998		47.749	22.758	1				42000	1843	20566	20655	48614	48614					0.017168241263561868
WLQRLTPV	8	Unmodified	_WLQRLTPV_					0	0	0			REV__ENSG00000182378|ENST00000381657|PLCXD1	REV__ENSG00000182378|ENST00000381657|PLCXD1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	337.9832031130791	3	338.202793	1011.58655	-0.06754	-2.2842E-05	1.7284	0.00058456	1.6609	0.00056172	338.20345428569095	26.607	0.30761	27.878	27.716	28.024	1.2715					16	9	2	0	0	0	2.3239	1	11179	11179		1.4819	0	1	441100	+		42001	11350	20567	20656	48615	48615					0.08122056922422871
WLQTQLLR	8	Unmodified	_WLQTQLLR_					0	0	0		ENST00000522667.1_1_8:130691508-130694119:-|nuORF	ENST00000522667.1_1_8:130691508-130694119:-|nuORF	ENST00000522667.1_1_8:130691508-130694119:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	529.3140136599541	2	529.311284	1056.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.65	1	103.81	103.31	104.31	0.16055								0	0	0	1.0178	1	43738	43738		0.69038	0	1				42002	7095	20568	20657	48616	48616					0.08197441951142537
WLQWTNGKV	9	Unmodified	_WLQWTNGKV_					0	0	0		ENST00000355673.7_1_12:57922198-57922267:+|nuORF	ENST00000355673.7_1_12:57922198-57922267:+|nuORF	ENST00000355673.7_1_12:57922198-57922267:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3027221560478	2	566.300916	1130.58728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.729	1	51.706	51.206	52.206	1.9772								0	0	0	0.35192	1	20829	20829		13.508	0.46542	1				42003	5981	20569	20658	48617	48617					0.027208515714619352
WLRRGWRTRWR	11	Unmodified	_WLRRGWRTRWR_					0	0	0		ENST00000431489.5_1_2:62933068-62933182:+|nuORF	ENST00000431489.5_1_2:62933068-62933182:+|nuORF	ENST00000431489.5_1_2:62933068-62933182:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	814.9581786990166	2	814.960909	1627.90726	NaN	NaN	NaN	NaN	NaN	NaN	NaN	86.914	1	86.914	86.414	87.414	0								0	0	0	0.63775	1	36253	36253		0	0	1				42004	6502	20570	20659	48618	48618					0.11842752356187702
WLRSQLCY	8	Unmodified	_WLRSQLCY_					0	0	0			REV__ENSG00000129951|ENST00000520876|PLPPR3	REV__ENSG00000129951|ENST00000520876|PLPPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7704955935478	2	534.768394	1067.52224	3.005	0.001607	0.8716	0.00046611	3.8766	0.0020731	534.7691398357463	62.561	0.48252	63.974	63.679	64.162	1.4134					27	15	2	0	0	0	0.68174	1	26224	26224		32.117	0	1	8385200	+		42005	9761	20571	20660	48619	48619					-0.008824662260167315
WLRSQLCY	8	Unmodified	_WLRSQLCY_					0	0	0			REV__ENSG00000129951|ENST00000520876|PLPPR3	REV__ENSG00000129951|ENST00000520876|PLPPR3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7712280154228	2	534.768394	1067.52224	3.153	0.0016861	0.85015	0.00045463	4.0032	0.0021408	534.7693742455294	61.985	0.49135	63.942	63.688	64.18	1.9571					47	15	4	0	0	0	0.59872	2	26041	25991;26041		40.449	0	1	5742200	+		42006	9761	20571	20660	48620;48621	48621					-0.008824662260167315
WLRSQLCY	8	Unmodified	_WLRSQLCY_					0	0	0			REV__ENSG00000129951|ENST00000520876|PLPPR3	REV__ENSG00000129951|ENST00000520876|PLPPR3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	534.768394	1067.52224	3.005	0.001607	0.8716	0.00046611	3.8766	0.0020731	534.7691398357463	62.561	0.48252	63.974	63.679	64.162	1.4134	0.016049	1.0427E-05	NaN	40.449	27	15	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	8385200	+		42007	9761	20571	20660							-0.008824662260167315
WLRSQLCY	8	Unmodified	_WLRSQLCY_					0	0	0			REV__ENSG00000129951|ENST00000520876|PLPPR3	REV__ENSG00000129951|ENST00000520876|PLPPR3	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	534.768394	1067.52224	3.153	0.0016861	0.85015	0.00045463	4.0032	0.0021408	534.7693742455294	61.985	0.49135	63.942	63.688	64.18	1.9571	-0.016049	-1.2521E-05	NaN	40.449	47	15	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5742200	+		42008	9761	20571	20660							-0.008824662260167315
WLSAQHITEKW	11	Unmodified	_WLSAQHITEKW_					0	0	0			REV__ENST00000469997.1_1_16:69068020-69068488:+|nuORF	REV__ENST00000469997.1_1_16:69068020-69068488:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	466.9109374880791	3	466.910338	1397.70918	1.6618	0.00077589	0.29768	0.00013899	1.9594	0.00091488	466.91042276875794	30.328	0.7971	30.328	30.131	30.928	0					59	25	3	0	0	0	0.83819	1	12719	12719		13.535	6.1059	1	2779800	+		42009	13274	20572	20661	48622	48622					0.0262384886318614
WLSAQHITEKW	11	Unmodified	_WLSAQHITEKW_					0	0	0			REV__ENST00000469997.1_1_16:69068020-69068488:+|nuORF	REV__ENST00000469997.1_1_16:69068020-69068488:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	466.910338	1397.70918	1.8126	0.00084634	0.33069	0.0001544	2.1433	0.0010007	466.91014233433214	29.886	0.38919	30.172	29.993	30.383	0.2859	-0.077883	2.5646E-05	NaN	13.535	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1400200	+		42010	13274	20572	20661							0.0262384886318614
WLSHPWFV	8	Unmodified	_WLSHPWFV_					0	0	0			REV__ENST00000396591.7_1_5:68400489-68404190:+|nuORF	REV__ENST00000396591.7_1_5:68400489-68404190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2745849490166	2	536.27417	1070.53379	1.9209	0.0010301	-0.30912	-0.00016577	1.6118	0.00086437	536.2737379093394	67.003	0.43321	68.391	68.153	68.586	1.3888					48	13	5	0	0	0	0.62161	3	28146	28058;28106;28146		38.151	9.6643	1	14413000	+		42011	12852	20573	20662	48623;48624;48625	48625					0.001340988595984527
WLSHPWFV	8	Unmodified	_WLSHPWFV_					0	0	0			REV__ENST00000396591.7_1_5:68400489-68404190:+|nuORF	REV__ENST00000396591.7_1_5:68400489-68404190:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.2750121951103	2	536.27417	1070.53379	1.7668	0.00094749	-0.059588	-3.1955E-05	1.7072	0.00091553	536.2738223570667	66.5	0.46611	68.389	68.15	68.616	1.8889					41	14	4	0	0	0	0.62161	3	27884	27838;27884;27927		38.151	11.268	1	11883000	+		42012	12852	20573	20662	48626;48627;48628	48627					0.001340988595984527
WLTETITVQKE	11	Unmodified	_WLTETITVQKE_					0	0	0			REV__nc|nan|Q6X4T0-2|C12orf54	REV__nc|nan|Q6X4T0-2|C12orf54	MSMS	GG20161007_CRH_Patient100_A02_02	2	449.9118835330009	3	449.910004	1346.70818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.35	1	111.39	110.89	111.89	0.047043								0	0	0	0.63775	1	48010	48010		0	0	1		+		42013	11221	20574	20663	48629	48629					0.04869589703571364
WLTIERNLVQ	10	Unmodified	_WLTIERNLVQ_					0	0	0			REV__ENST00000598044.1_1_19:50861812-50862477:-|nuORF	REV__ENST00000598044.1_1_19:50861812-50862477:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3598510622978	2	636.358962	1270.70337	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.42	1	104.59	104.09	105.09	0.1731								0	0	0	0.65926	1	44171	44171		5.7319	0	1		+		42014	14106	20575	20664	48630	48630					0.07884750351513503
WLTKKYLIRWL	11	Unmodified	_WLTKKYLIRWL_					0	0	0			REV__nc|ENSG00000197603|Q9H799-5|CPLANE1	REV__nc|ENSG00000197603|Q9H799-5|CPLANE1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.3116943240166	3	507.309773	1518.90749	2.4462	0.001241	1.0665	0.00054103	3.5127	0.001782	507.31038140851825	90.796	1.1557	90.796	90.032	91.188	0					80	36	3	0	0	0	1.0402	1	37970	37970		0.094841	0	1	2075400	+		42015	11682	20576	20665	48631	48631					0.16879314512834753
WLTPIIPILW	10	Unmodified	_WLTPIIPILW_					0	0	0		YIPF1|p.V274Gfs*58|1|0.12|ENSG00000058799|chr1:53866210-53866210|A/-|frameshift_variant	YIPF1|p.V274Gfs*58|1|0.12|ENSG00000058799|chr1:53866210-53866210|A/-|frameshift_variant	YIPF1|p.V274Gfs*58|1|0.12|ENSG00000058799|chr1:53866210-53866210|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9210998415947	3	417.921515	1250.74272	1.379	0.0005763	-2.007	-0.00083878	-0.62806	-0.00026248	417.9204817891562	30.082	0.47583	30.367	30.054	30.53	0.2859					36	15	3	0	0	0	0.89422	1	12594	12594		2.086	0.49373	1	7786400			42016	17359	20577	20666	48632	48632					0.12737502373056486
WLVAAARP	8	Unmodified	_WLVAAARP_					0	0	0			REV__ENST00000249883.9_1_3:134090198-134093306:-|nuORF	REV__ENST00000249883.9_1_3:134090198-134093306:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	442.2605773806572	2	442.261062	882.507572	2.9409	0.0013006	-2.2682	-0.0010031	0.67269	0.0002975	442.2595155296108	84.155	1.0183	84.416	84.186	85.204	0.26083					50	31	3	0	0	0	0.89051	1	35196	35196		2.3027	0	1	2720800	+		42017	12143	20578	20667	48633	48633					0.06161829688130638
WLVDHVYAI	9	Unmodified	_WLVDHVYAI_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.2996703982353	2	558.297842	1114.58113	1.4172	0.0007912	2.2651	0.0012646	3.6822	0.0020558	558.298378114452	64.271	0.25555	64.271	64.174	64.43	0					17	7	3	0	0	0	0.10294	1	26807	26807		48.346	16.04	1	630570			42018	1526	20579	20668	48634	48634					0.028423333399359763
WLVDHVYAI	9	Unmodified	_WLVDHVYAI_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	558.2999145388603	2	558.297842	1114.58113	1.8382	0.0010263	1.487	0.00083019	3.3252	0.0018565	558.2987744296863	63.781	0.26909	64.11	63.94	64.209	0.32899					13	8	2	0	0	0	0.12174	1	26716	26716		42.095	4.1206	1	885990			42019	1526	20579	20668	48635	48635					0.028423333399359763
WLVDHVYAI	9	Unmodified	_WLVDHVYAI_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	558.3004028201103	2	558.297842	1114.58113	2.9361	0.0016392	0.60272	0.00033649	3.5388	0.0019757	558.298213487868	62.561	0.35578	63.974	63.775	64.131	1.4134					27	11	3	0	0	0	0.031324	2	26216	26216;26270		85.357	37.608	1	4130100			42020	1526	20579	20668	48636;48637	48636					0.028423333399359763
WLVDHVYAI	9	Unmodified	_WLVDHVYAI_					0	0	0		ENSG00000105568|ENST00000322088|PPP2R1A;ENST00000534521.5_1_11:111612322-111631898:-|nuORF;nc|ENSG00000137713|P30154-5|PPP2R1B;PPP2R1A|p.M499*|1|0.2|ENSG00000105568|chr19:52221110-52221110|A/-|frameshift_variant;ENSG00000137713|ENST00000527614|PPP2R1B;nc|ENSG00000137713|P30154-3|PPP2R1B;nc|ENSG00000137713|P30154-2|PPP2R1B;nc|ENSG00000137713|P30154-4|PPP2R1B;ENST00000529672.1_1_11:111613245-111618714:-|nuORF	ENSG00000105568|ENST00000322088|PPP2R1A	ENSG00000105568|ENST00000322088|PPP2R1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.3005859255791	2	558.297842	1114.58113	2.8502	0.0015913	0.57194	0.00031931	3.4222	0.0019106	558.2984286486372	61.967	0.33971	63.924	63.751	64.091	1.9571					22	10	3	0	0	0	0.059546	2	25992	25992;26047		64.236	20.378	1	3045600			42021	1526	20579	20668	48638;48639	48638					0.028423333399359763
WLVNRLPGLK	10	Unmodified	_WLVNRLPGLK_					0	0	0		ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF	ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2501098513603	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.7303	1	10.475	9.975	10.975	0.74462								0	0	0	0.66222	1	4051	4051		0.69767	0.24315	1				42022	4267	20580	20669	48640	48640					0.13413965801987615
WLVNRLPGLK	10	Unmodified	_WLVNRLPGLK_					0	0	0		ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-4|KDM2A;nc|ENSG00000173120|Q9Y2K7-5|KDM2A;ENST00000524657.1_1_11:67020024-67022523:+|nuORF	ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2498351931572	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.85	1	13.638	13.138	14.138	0.78751								0	0	0	0.66222	1	5330	5330		0.69767	0.24315	1				42023	4267	20580	20669	48641	48641					0.13413965801987615
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2504455447197	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7254	1	8.7254	8.2254	9.2254	0								0	0	0	0.42693	1	3590	3590		0.26902	0	1		+		42024	12282	20581	20670	48642	48642					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2505065798759	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.749	1	72.749	72.249	73.249	0								0	0	0	0.42693	1	30289	30289		1.1933	0.23107	1		+		42025	12282	20581	20670	48643	48643					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2506286501884	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.439	1	73.439	72.939	73.939	0								0	0	0	0.42693	1	30576	30576		1.1933	0.23107	1		+		42026	12282	20581	20670	48644	48644					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2502624392509	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.75	1	115.75	115.25	116.25	0								0	0	0	0.42693	1	49943	49943		0.26902	0.033176	1		+		42027	12282	20581	20670	48645	48645					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2509033083916	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.56	1	117.56	117.06	118.06	0								0	0	0	0.42693	1	50684	50684		0.26902	0.033176	1		+		42028	12282	20581	20670	48646	48646					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2510864138603	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.13	1	119.13	118.63	119.63	0								0	0	0	0.42693	1	51311	51311		0.26902	0	1		+		42029	12282	20581	20670	48647	48647					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2505981326103	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.66	1	119.66	119.16	120.16	0								0	0	0	0.42693	1	51528	51528		0.26902	0.033176	1		+		42030	12282	20581	20670	48648	48648					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2507812380791	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8497	1	1.9967	1.4967	2.4967	0.14703								0	0	0	0.42693	1	761	761		0.26902	0	1		+		42031	12282	20581	20670	48649	48649					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2503845095634	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9069	1	3.0295	2.5295	3.5295	0.12256								0	0	0	0.42693	1	1200	1200		0.26902	0	1		+		42032	12282	20581	20670	48650	48650					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2506286501884	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.863	1	24.106	23.606	24.606	0.24251								0	0	0	0.42693	1	9952	9952		1.1933	0.41681	1		+		42033	12282	20581	20670	48651	48651					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2512695193291	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.702	1	28.981	28.481	29.481	0.2793								0	0	0	0.42693	1	12009	12009		1.1933	0	1		+		42034	12282	20581	20670	48652	48652					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2523376345634	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.634	1	59.96	59.46	60.46	0.32553								0	0	0	0.42693	1	24989	24989		1.1933	0.23107	1		+		42035	12282	20581	20670	48653	48653					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2511169314384	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	64.866	1	65.193	64.693	65.693	0.32689								0	0	0	0.42693	1	27169	27169		1.1933	0.23107	1		+		42036	12282	20581	20670	48654	48654					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2533752322197	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.984	1	66.309	65.809	66.809	0.32449								0	0	0	0.42693	1	27626	27626		1.1933	0.23107	1		+		42037	12282	20581	20670	48655	48655					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2510864138603	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.46	1	71.784	71.284	72.284	0.32359								0	0	0	0.42693	1	29905	29905		1.1933	0.12188	1		+		42038	12282	20581	20670	48656	48656					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2520019412041	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.482	1	82.762	82.262	83.262	0.2802								0	0	0	0.42693	1	34491	34491		1.1933	0.23107	1		+		42039	12282	20581	20670	48657	48657					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2516967654228	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.245	1	93.413	92.913	93.913	0.16835								0	0	0	0.42693	1	39038	39038		1.1933	0.23107	1		+		42040	12282	20581	20670	48658	48658					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2510558962822	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.5	1	113.55	113.05	114.05	0.044189								0	0	0	0.42693	1	48885	48885		0.26902	0	1		+		42041	12282	20581	20670	48659	48659					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2508727908134	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.08	1	115.12	114.62	115.62	0.042839								0	0	0	0.42693	1	49520	49520		0.26902	0.033176	1		+		42042	12282	20581	20670	48660	48660					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2514831423759	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.41	1	115.46	114.96	115.96	0.041786								0	0	0	0.42693	1	49653	49653		0.26902	0	1		+		42043	12282	20581	20670	48661	48661					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509948611259	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	117.22	1	117.26	116.76	117.76	0.041039								0	0	0	0.42693	1	50378	50378		0.26902	0	1		+		42044	12282	20581	20670	48662	48662					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	399.2509033083916	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.94	1	118.99	118.49	119.49	0.041039								0	0	0	0.42693	1	51084	51084		0.26902	0.033176	1		+		42045	12282	20581	20670	48663	48663					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2505065798759	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9012	1	8.5283	8.0283	9.0283	0.62713								0	0	0	0.42693	1	3271	3271		0.26902	0	1		+		42046	12282	20581	20670	48664	48664					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2483703494072	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0882	1	8.7247	8.2247	9.2247	0.63651								0	0	0	0.42693	1	3350	3350		0.26902	0	1		+		42047	12282	20581	20670	48665	48665					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2495910525322	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.2271	1	8.8636	8.3636	9.3636	0.63651								0	0	0	0.42693	1	3409	3409		0.26902	0	1		+		42048	12282	20581	20670	48666	48666					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2489501833916	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8406	1	9.4771	8.9771	9.9771	0.63651								0	0	0	0.42693	1	3671	3671		0.26902	0	1		+		42049	12282	20581	20670	48667	48667					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2497131228447	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9407	1	9.5772	9.0772	10.077	0.63651								0	0	0	0.42693	1	3713	3713		0.26902	0	1		+		42050	12282	20581	20670	48668	48668					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2487670779228	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.2486	1	9.8992	9.3992	10.399	0.65058								0	0	0	0.42693	1	3842	3842		0.26902	0	1		+		42051	12282	20581	20670	48669	48669					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2497436404228	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.3621	1	10.013	9.5127	10.513	0.65058								0	0	0	0.42693	1	3889	3889		0.26902	0	1		+		42052	12282	20581	20670	48670	48670					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2502014040947	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.5127	1	10.163	9.6633	10.663	0.65058								0	0	0	0.42693	1	3953	3953		0.26902	0	1		+		42053	12282	20581	20670	48671	48671					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2500488162041	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.235	1	15.004	14.504	15.504	0.76937								0	0	0	0.42693	1	5915	5915		0.26902	0	1		+		42054	12282	20581	20670	48672	48672					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507507205009	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.208	1	23.385	22.885	23.885	1.177								0	0	0	0.42693	1	9282	9282		0.26902	0.033176	1		+		42055	12282	20581	20670	48673	48673					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2505676150322	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.616	1	23.831	23.331	24.331	1.2145								0	0	0	0.42693	1	9451	9451		1.1933	0	1		+		42056	12282	20581	20670	48674	48674					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2501708865166	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	22.776	1	23.99	23.49	24.49	1.2145								0	0	0	0.42693	1	9519	9519		1.1933	0.41681	1		+		42057	12282	20581	20670	48675	48675					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2501098513603	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.074	1	24.289	23.789	24.789	1.2145								0	0	0	0.42693	1	9644	9644		1.1933	0.12188	1		+		42058	12282	20581	20670	48676	48676					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2492858767509	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.764	1	30.046	29.546	30.546	1.2825								0	0	0	0.42693	1	12061	12061		1.1933	0.49568	1		+		42059	12282	20581	20670	48677	48677					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2509643435478	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.05	1	33.331	32.831	33.831	1.2813								0	0	0	0.42693	1	13444	13444		1.1933	0.12188	1		+		42060	12282	20581	20670	48678	48678					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2513000369072	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.548	1	47.923	47.423	48.423	1.3751								0	0	0	0.42693	1	19498	19498		1.1933	0.41681	1		+		42061	12282	20581	20670	48679	48679					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2507812380791	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.335	1	50.726	50.226	51.226	1.3911								0	0	0	0.42693	1	20652	20652		1.1933	0.12188	1		+		42062	12282	20581	20670	48680	48680					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2514526247978	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.599	1	61.019	60.519	61.519	1.4196								0	0	0	0.42693	1	24991	24991		1.1933	0.41681	1		+		42063	12282	20581	20670	48681	48681					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2520934939384	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	70.195	1	71.549	71.049	72.049	1.3536								0	0	0	0.42693	1	29462	29462		1.1933	0.23107	1		+		42064	12282	20581	20670	48682	48682					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2520019412041	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.474	1	90.494	89.994	90.994	1.0199								0	0	0	0.42693	1	37705	37705		1.1933	0.12188	1		+		42065	12282	20581	20670	48683	48683					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2473937869072	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.96	1	108.12	107.62	108.62	0.15781								0	0	0	0.42693	1	46582	46582		0.26902	0	1		+		42066	12282	20581	20670	48684	48684					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2490722537041	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2444	1	3.9896	3.4896	4.4896	0.74525								0	0	0	0.42693	1	1346	1346		0.26902	0	1		+		42067	12282	20581	20670	48685	48685					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2504455447197	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3419	1	4.0871	3.5871	4.5871	0.74525								0	0	0	0.42693	1	1386	1386		0.26902	0	1		+		42068	12282	20581	20670	48686	48686					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2495605349541	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5487	1	4.2939	3.7939	4.7939	0.74525								0	0	0	0.42693	1	1472	1472		0.26902	0	1		+		42069	12282	20581	20670	48687	48687					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502319216728	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6439	1	4.3891	3.8891	4.8891	0.74525								0	0	0	0.42693	1	1511	1511		0.26902	0	1		+		42070	12282	20581	20670	48688	48688					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505370974541	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8067	1	6.5375	6.0375	7.0375	0.73074								0	0	0	0.42693	1	2408	2408		0.26902	0	1		+		42071	12282	20581	20670	48689	48689					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2486144900322	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9082	1	6.6389	6.1389	7.1389	0.73074								0	0	0	0.42693	1	2450	2450		0.26902	0	1		+		42072	12282	20581	20670	48690	48690					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2504760622978	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.0077	1	6.7384	6.2384	7.2384	0.73074								0	0	0	0.42693	1	2492	2492		0.26902	0	1		+		42073	12282	20581	20670	48691	48691					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2510864138603	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.583	1	13.371	12.871	13.871	0.78751								0	0	0	0.42693	1	5221	5221		0.26902	0	1		+		42074	12282	20581	20670	48692	48692					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2508727908134	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.739	1	13.527	13.027	14.027	0.78751								0	0	0	0.42693	1	5285	5285		0.26902	0	1		+		42075	12282	20581	20670	48693	48693					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2500793337822	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.18	1	15.076	14.576	15.576	0.89664								0	0	0	0.42693	1	5881	5881		0.26902	0.033176	1		+		42076	12282	20581	20670	48694	48694					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2499572634697	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.344	1	15.241	14.741	15.741	0.89664								0	0	0	0.42693	1	5951	5951		0.26902	0.033176	1		+		42077	12282	20581	20670	48695	48695					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2505370974541	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.902	1	15.799	15.299	16.299	0.89664								0	0	0	0.42693	1	6183	6183		0.26902	0	1		+		42078	12282	20581	20670	48696	48696					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2506591677666	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.375	1	17.414	16.914	17.914	1.0392								0	0	0	0.42693	1	6800	6800		0.26902	0	1		+		42079	12282	20581	20670	48697	48697					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2497741580009	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.815	1	19.263	18.763	19.763	1.448								0	0	0	0.42693	1	7401	7401		0.26902	0.033176	1		+		42080	12282	20581	20670	48698	48698					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2518493533134	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.552	1	29.327	28.827	29.827	1.7754								0	0	0	0.42693	1	11531	11531		0.26902	0	1		+		42081	12282	20581	20670	48699	48699					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502624392509	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.19	1	38.008	37.508	38.508	1.8176								0	0	0	0.42693	1	15175	15175		1.1933	0	1		+		42082	12282	20581	20670	48700	48700					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2500793337822	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.71	1	38.528	38.028	39.028	1.8176								0	0	0	0.42693	1	15402	15402		1.1933	0.49568	1		+		42083	12282	20581	20670	48701	48701					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2495910525322	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.415	1	42.278	41.778	42.778	1.8624								0	0	0	0.42693	1	16943	16943		1.1933	0	1		+		42084	12282	20581	20670	48702	48702					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2501708865166	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.33	1	61.299	60.799	61.799	1.969								0	0	0	0.42693	1	24891	24891		1.1933	0.23107	1		+		42085	12282	20581	20670	48703	48703					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2512084841728	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.727	1	63.684	63.184	64.184	1.9571								0	0	0	0.42693	1	25898	25898		1.1933	0.23107	1		+		42086	12282	20581	20670	48704	48704					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2506896853447	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.365	1	65.309	64.809	65.809	1.9444								0	0	0	0.42693	1	26587	26587		1.1933	0.23107	1		+		42087	12282	20581	20670	48705	48705					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520629763603	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.528	1	90.932	90.432	91.432	1.4045								0	0	0	0.42693	1	37719	37719		1.1933	0.12188	1		+		42088	12282	20581	20670	48706	48706					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2520934939384	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.714	1	91.119	90.619	91.619	1.4045								0	0	0	0.42693	1	37796	37796		1.1933	0.12188	1		+		42089	12282	20581	20670	48707	48707					0.13816055295728802
WLVWLLRPL	9	Unmodified	_WLVWLLRPL_					0	0	0			REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	REV__ENST00000292431.4_1_19:13250289-13250439:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2502624392509	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.64	1	118.8	118.3	119.3	0.16237								0	0	0	0.42693	1	51213	51213		0.26902	0	1		+		42090	12282	20581	20670	48708	48708					0.13816055295728802
WLWGCSIPPF	10	Unmodified	_WLWGCSIPPF_					0	0	0		nc|ENSG00000022556|Q9NX02-4|NLRP2;nc|ENSG00000022556|Q9NX02-5|NLRP2;nc|ENSG00000022556|Q9NX02-2|NLRP2;ENSG00000022556|ENST00000448584|NLRP2;ENST00000540597.5_1_19:55501708-55512263:+|nuORF	nc|ENSG00000022556|Q9NX02-4|NLRP2	nc|ENSG00000022556|Q9NX02-4|NLRP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.2984496951103	2	603.294245	1204.57394	2.1156	0.0012763	3.2049	0.0019335	5.3205	0.0032098	603.2960309777732	43.475	0.14771	45.419	45.368	45.516	1.9438					7	4	2	0	0	0	0.78468	1	18238	18238		13.906	2.2658	1	607040			42091	615	20582	20671	48709	48709					-0.02016722532152926
WLWTARHPHS	10	Unmodified	_WLWTARHPHS_					0	0	0		nc|ENSG00000290746|Q8WTZ4|CA5BP1;ENST00000380334.6_1_X:15706900-15721312:+|nuORF	nc|ENSG00000290746|Q8WTZ4|CA5BP1	nc|ENSG00000290746|Q8WTZ4|CA5BP1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8893005251884	3	430.887868	1289.64177	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.935	1	95.124	94.624	95.624	1.1887								0	0	0	0.66254	1	39525	39525		0.15932	0	1				42092	6223	20583	20672	48710	48710					0.00853863442898728
WLYGQKLV	8	Unmodified	_WLYGQKLV_					0	0	0			REV__ENSG00000023892|ENST00000316637|DEF6	REV__ENSG00000023892|ENST00000316637|DEF6	MSMS	GG20161007_CRH_Patient100_W632_02	4	503.7912475466728	2	503.789653	1005.56475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.43	1	103.61	103.11	104.11	0.18066								0	0	0	1.0178	1	43555	43555		5.7604	0	1		+		42093	8566	20584	20673	48711	48711					0.062192521738552387
WMAFNVER	8	Unmodified	_WMAFNVER_					0	0	0		ENSG00000103044|ENST00000569188|HAS3	ENSG00000103044|ENST00000569188|HAS3	ENSG00000103044|ENST00000569188|HAS3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.3613769412041	2	526.752744	1051.49094	0.34824	0.00018344	3.1535	0.0016611	3.5018	0.0018446	526.7547251612813	16.292	0.32761	17.118	16.969	17.297	0.82643					25	16	2	0	0	0	2.3239	1	6829	6829		3.9444	0.66309	1	693110			42094	1414	20585	20674	48712	48712					-0.032750392601201384
WMLEQLRQV	9	Unmodified	_WMLEQLRQV_					0	0	0		ENSG00000168952|ENST00000323944|STXBP6;nc|ENSG00000168952|Q8NFX7-2|STXBP6;SPON1-STXBP6|1|fusion	ENSG00000168952|ENST00000323944|STXBP6	ENSG00000168952|ENST00000323944|STXBP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8218261599541	2	601.821158	1201.62776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.958	1	58.372	57.872	58.872	1.4145								0	0	0	0.17971	1	23872	23872		27.629	7.1752	1				42095	4061	20586	20675	48713	48713					0.03501449899567888
WMMETKAHVIG	11	Unmodified	_WMMETKAHVIG_					0	0	0		ENSG00000126861|ENST00000247271|OMG	ENSG00000126861|ENST00000247271|OMG	ENSG00000126861|ENST00000247271|OMG	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8829223513603	3	434.882626	1301.62605	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.47431	1	1.2101	0.7101	1.7101	0.73579								0	0	0	0.63775	1	195	195		0.094841	0	1				42096	2322	20587	20676	48714	48714					-0.012699271806923207
WMMMTVRY	8	Unmodified	_WMMMTVRY_					0	0	0		ENST00000204566.6_1_15:65273230-65275885:-|nuORF	ENST00000204566.6_1_15:65273230-65275885:-|nuORF	ENST00000204566.6_1_15:65273230-65275885:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	559.8186523318291	2	559.253208	1116.49186	2.5834	0.0014448	-1.4962	-0.00083677	1.0871	0.00060799	559.2521606779245	91.774	0.22766	91.965	91.852	92.08	0.19042					10	6	2	0	0	0	2.3239	1	38433	38433		0.6015	0	1	210920			42097	5509	20588	20677	48715	48715					-0.06172284207082157
WMQTFLLT	8	Unmodified	_WMQTFLLT_					0	0	0		nc|ENSG00000104972|Q8NHL6|LILRB1;nc|ENSG00000104972|Q8NHL6-4|LILRB1;nc|ENSG00000104972|Q8NHL6-2|LILRB1;nc|ENSG00000104972|Q8NHL6-3|LILRB1;ENSG00000104972|ENST00000324602|LILRB1;nc|ENSG00000104972|Q8NHL6-5|LILRB1	nc|ENSG00000104972|Q8NHL6|LILRB1	nc|ENSG00000104972|Q8NHL6|LILRB1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1039.932543933392	1	1039.52812	1038.52084	2.8165	0.0029278	1.6468	0.0017119	4.4632	0.0046396	1039.5299672843075	59.696	0.1571	60.022	59.964	60.121	0.32554					7	4	2	0	0	0	2.3239	1	25046	25046		23.148	1.4018	1	620640			42098	1493	20589	20678	48716	48716					0.0031189968519811373
WMRRTRRPRF	10	Unmodified	_WMRRTRRPRF_					0	0	0		ENST00000550564.1_1_12:53468877-53473168:-|nuORF	ENST00000550564.1_1_12:53468877-53473168:-|nuORF	ENST00000550564.1_1_12:53468877-53473168:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	731.4138671755791	2	731.409663	1460.80477	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.61	1	104.77	104.27	105.27	0.16055								0	0	0	0.66243	1	44360	44360		0.35063	0	1				42099	7265	20590	20679	48717	48717					0.09280343293062288
WMSMHHRR	8	Unmodified	_WMSMHHRR_					0	0	0			REV__ENSG00000198216|ENST00000367573|CACNA1E	REV__ENSG00000198216|ENST00000367573|CACNA1E	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	381.1816589236259	3	380.84825	1139.52292	-0.45067	-0.00017164	-3.81	-0.001451	-4.2607	-0.0016227	381.18089757766785	71.086	0.31889	71.086	70.842	71.161	0					12	9	2	0	0	0	0.88846	1	29577	29577		3.5965	1.098	1	1293600	+		42100	11704	20591	20680	48718	48718					-0.041259500579826636
WMYTFSRA	8	Unmodified	_WMYTFSRA_					0	0	0		ENSG00000122557|ENST00000311350|HERPUD2	ENSG00000122557|ENST00000311350|HERPUD2	ENSG00000122557|ENST00000311350|HERPUD2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	355.0699645876884	3	354.500622	1060.48004	-1.2508	-0.00044342	0.28248	0.00010014	-0.96835	-0.00034328	354.500680417237	70.274	0.1847	70.274	70.149	70.333	0					6	5	2	0	0	0	2.3239	1	29223	29223		0	0	1	120340			42101	2161	20592	20681	48719	48719					-0.04778441634402952
WNAIDEGP	8	Unmodified	_WNAIDEGP_					0	0	0		ENSG00000001036|ENST00000002165|FUCA2	ENSG00000001036|ENST00000002165|FUCA2	ENSG00000001036|ENST00000002165|FUCA2	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1421691775322	3	301.139859	900.397747	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.32	1	115.36	114.86	115.86	0.041786								0	0	0	1.0178	1	49616	49616		0.45834	0	1				42102	455	20593	20682	48720	48720					-0.056436404417013364
WNEGLLLG	8	Unmodified	_WNEGLLLG_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49742606-49743280:+|nuORF;ENST00000457726.5_1_3:49742606-49750139:+|nuORF;ENST00000486102.5_1_3:49742606-49753136:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1651183962822	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.29	1	103.35	102.85	103.85	0.059502								0	0	0	1.0178	1	43299	43299		0.45834	0	1				42103	3745	20594	20683	48721	48721					0.01630113351734508
WNEGLLLG	8	Unmodified	_WNEGLLLG_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49742606-49743280:+|nuORF;ENST00000457726.5_1_3:49742606-49750139:+|nuORF;ENST00000486102.5_1_3:49742606-49753136:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1648437380791	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.02	1	104.08	103.58	104.58	0.059502								0	0	0	1.0178	1	43787	43787		0.45834	0	1				42104	3745	20594	20683	48722	48722					0.01630113351734508
WNEGLLLG	8	Unmodified	_WNEGLLLG_					0	0	0		ENSG00000164068|ENST00000327697|RNF123;nc|ENSG00000164068|Q5XPI4-2|RNF123;ENST00000487805.6_1_3:49742606-49743280:+|nuORF;ENST00000457726.5_1_3:49742606-49750139:+|nuORF;ENST00000486102.5_1_3:49742606-49753136:+|nuORF	ENSG00000164068|ENST00000327697|RNF123	ENSG00000164068|ENST00000327697|RNF123	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1653320193291	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.19	1	103.36	102.86	103.86	0.16445								0	0	0	1.0178	1	43479	43479		0.45834	0	1				42105	3745	20594	20683	48723	48723					0.01630113351734508
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1412231326103	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5428	1	5.6308	5.1308	6.1308	0.08803								0	0	0	1.0178	1	2290	2290		0.45834	0.057624	1		+		42106	8644	20595	20684	48724	48724					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1419250369072	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.746	1	5.8259	5.3259	6.3259	0.079923								0	0	0	1.0178	1	2375	2375		0.45834	0.18932	1		+		42107	8644	20595	20684	48725	48725					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1419555544853	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2784	1	6.3583	5.8583	6.8583	0.079923								0	0	0	1.0178	1	2595	2595		0.45834	0.18932	1		+		42108	8644	20595	20684	48726	48726					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1410705447197	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7972	1	6.8751	6.3751	7.3751	0.077953								0	0	0	1.0178	1	2810	2810		0.45834	0.18932	1		+		42109	8644	20595	20684	48727	48727					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1413452029228	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0896	1	7.166	6.666	7.666	0.07632								0	0	0	1.0178	1	2933	2933		0.45834	0.18932	1		+		42110	8644	20595	20684	48728	48728					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1413757205009	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3858	1	7.4621	6.9621	7.9621	0.07632								0	0	0	1.0178	1	3055	3055		0.45834	0.057624	1		+		42111	8644	20595	20684	48729	48729					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1408874392509	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7743	1	7.8506	7.3506	8.3506	0.07632								0	0	0	1.0178	1	3216	3216		0.45834	0.18932	1		+		42112	8644	20595	20684	48730	48730					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1410095095634	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8829	1	7.9592	7.4592	8.4592	0.07632								0	0	0	1.0178	1	3261	3261		0.45834	0.18932	1		+		42113	8644	20595	20684	48731	48731					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1415893435478	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.64	1	113.68	113.18	114.18	0.044189								0	0	0	1.0178	1	48939	48939		0.45834	0	1		+		42114	8644	20595	20684	48732	48732					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1410400271416	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6653	1	5.4017	4.9017	5.9017	0.73642								0	0	0	1.0178	1	1934	1934		0.45834	0.18932	1		+		42115	8644	20595	20684	48733	48733					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412231326103	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8744	1	5.6108	5.1108	6.1108	0.73642								0	0	0	1.0178	1	2022	2022		0.45834	0.057624	1		+		42116	8644	20595	20684	48734	48734					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414672732353	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9732	1	5.7096	5.2096	6.2096	0.73642								0	0	0	1.0178	1	2063	2063		0.45834	0.18932	1		+		42117	8644	20595	20684	48735	48735					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1417419314384	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0793	1	5.8157	5.3157	6.3157	0.73642								0	0	0	1.0178	1	2108	2108		0.45834	0.18932	1		+		42118	8644	20595	20684	48736	48736					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1417724490166	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1832	1	5.9196	5.4196	6.4196	0.73642								0	0	0	1.0178	1	2150	2150		0.45834	0.057624	1		+		42119	8644	20595	20684	48737	48737					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1409179568291	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.2792	1	6.0156	5.5156	6.5156	0.73642								0	0	0	1.0178	1	2190	2190		0.45834	0.18932	1		+		42120	8644	20595	20684	48738	48738					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415283083916	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4911	1	6.2275	5.7275	6.7275	0.73642								0	0	0	1.0178	1	2277	2277		0.45834	0.18932	1		+		42121	8644	20595	20684	48739	48739					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413452029228	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5835	1	6.3199	5.8199	6.8199	0.73642								0	0	0	1.0178	1	2316	2316		0.45834	0.18932	1		+		42122	8644	20595	20684	48740	48740					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412231326103	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.6843	1	6.415	5.915	6.915	0.73074								0	0	0	1.0178	1	2357	2357		0.45834	0.18932	1		+		42123	8644	20595	20684	48741	48741					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414977908134	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7849	1	6.5157	6.0157	7.0157	0.73074								0	0	0	1.0178	1	2399	2399		0.45834	0.18932	1		+		42124	8644	20595	20684	48742	48742					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412841677666	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.9956	1	6.7263	6.2263	7.2263	0.73074								0	0	0	1.0178	1	2487	2487		0.45834	0.18932	1		+		42125	8644	20595	20684	48743	48743					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1411926150322	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.1012	1	6.832	6.332	7.332	0.73074								0	0	0	1.0178	1	2530	2530		0.45834	0.18932	1		+		42126	8644	20595	20684	48744	48744					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415893435478	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.2037	1	6.9344	6.4344	7.4344	0.73074								0	0	0	1.0178	1	2573	2573		0.45834	0.18932	1		+		42127	8644	20595	20684	48745	48745					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416198611259	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4018	1	7.1325	6.6325	7.6325	0.73074								0	0	0	1.0178	1	2656	2656		0.45834	0.057624	1		+		42128	8644	20595	20684	48746	48746					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413452029228	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.4969	1	7.2276	6.7276	7.7276	0.73074								0	0	0	1.0178	1	2696	2696		0.45834	0.18932	1		+		42129	8644	20595	20684	48747	48747					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414062380791	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7096	1	7.4403	6.9403	7.9403	0.73074								0	0	0	1.0178	1	2786	2786		0.45834	0.18932	1		+		42130	8644	20595	20684	48748	48748					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414062380791	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9057	1	7.6365	7.1365	8.1365	0.73074								0	0	0	1.0178	1	2868	2868		0.45834	0.18932	1		+		42131	8644	20595	20684	48749	48749					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416808962822	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2148	1	7.9456	7.4456	8.4456	0.73074								0	0	0	1.0178	1	2997	2997		0.45834	0.18932	1		+		42132	8644	20595	20684	48750	48750					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1415283083916	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6711	1	8.4018	7.9018	8.9018	0.73074								0	0	0	1.0178	1	3186	3186		0.45834	0.057624	1		+		42133	8644	20595	20684	48751	48751					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1412841677666	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7724	1	8.5032	8.0032	9.0032	0.73074								0	0	0	1.0178	1	3228	3228		0.45834	0.057624	1		+		42134	8644	20595	20684	48752	48752					-0.05509961562290755
WNHPHGGP	8	Unmodified	_WNHPHGGP_					0	0	0			REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	REV__nc|ENSG00000058804|Q9BTX1-4|NDC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1413452029228	3	301.140304	900.399084	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9668	1	8.6975	8.1975	9.1975	0.73074								0	0	0	1.0178	1	3309	3309		0.45834	0.18932	1		+		42135	8644	20595	20684	48753	48753					-0.05509961562290755
WNIHGKESC	9	Unmodified	_WNIHGKESC_					0	0	0		nc|ENSG00000186265|Q7Z6A9-2|BTLA;ENSG00000186265|ENST00000334529|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	358.5008117556572	3	358.499281	1072.47601	2.1419	0.00076787	2.6763	0.00095944	4.8182	0.0017273	358.50000917060845	75.573	0.37025	75.895	75.742	76.112	0.32163					20	11	2	0	0	0	0.71526	1	31612	31612		4.1895	0.24511	1	1756700			42136	4784	20596	20685	48754	48754					-0.05732531128114715
WNIHGKESC	9	Unmodified	_WNIHGKESC_					0	0	0		nc|ENSG00000186265|Q7Z6A9-2|BTLA;ENSG00000186265|ENST00000334529|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	358.499281	1072.47601	-0.87851	-0.00031495	4.3206	0.0015489	3.4421	0.001234	358.50056758967605	76.026	0.31264	76.026	75.852	76.164	0	0.12377	0.0010185	NaN	4.1895	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2658200			42137	4784	20596	20685							-0.05732531128114715
WNIHGKESC	9	Unmodified	_WNIHGKESC_					0	0	0		nc|ENSG00000186265|Q7Z6A9-2|BTLA;ENSG00000186265|ENST00000334529|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	358.499281	1072.47601	2.045	0.00073314	3.2247	0.001156	5.2697	0.0018892	358.83519347355735	74.56	0.35964	75.866	75.699	76.059	1.3063	-0.036349	-0.0001601	NaN	4.1895	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3817500			42138	4784	20596	20685							-0.05732531128114715
WNIHGKESC	9	Unmodified	_WNIHGKESC_					0	0	0		nc|ENSG00000186265|Q7Z6A9-2|BTLA;ENSG00000186265|ENST00000334529|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	nc|ENSG00000186265|Q7Z6A9-2|BTLA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	358.499281	1072.47601	2.6104	0.00093581	2.5043	0.00089779	5.1146	0.0018336	358.8350446188377	74.026	0.36382	75.823	75.687	76.051	1.7962	-0.079896	-0.00093488	NaN	4.1895	16	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1652700			42139	4784	20596	20685							-0.05732531128114715
WNINHSMSHG	10	Unmodified	_WNINHSMSHG_					0	0	0			REV__ENST00000419523.1_1_2:131032269-131032449:+|nuORF	REV__ENST00000419523.1_1_2:131032269-131032449:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.8410217165947	3	394.841818	1181.50363	-0.10709	-4.2284E-05	-2.2865	-0.00090281	-2.3936	-0.0009451	394.84084215880847	11.504	0.8406	12.266	11.762	12.603	0.76165					53	26	3	0	0	0	0.88278	1	4676	4676		3.3196	0	1	1023600	+		42140	12967	20597	20686	48755	48755					-0.07986627867899188
WNRAWTPRWEE	11	Unmodified	_WNRAWTPRWEE_					0	0	0			REV__ENSG00000106304|ENST00000682466|SPAM1	REV__ENSG00000106304|ENST00000682466|SPAM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2452880740166	3	510.912742	1529.7164	0.54832	0.00028014	-0.80934	-0.0004135	-0.26102	-0.00013336	510.9123690191197	15.109	0.21276	16.006	15.869	16.082	0.89664					17	6	3	0	0	0	1.0365	1	6263	6263		1.2148	0.76031	1	1528500	+		42141	9205	20598	20687	48756	48756					-0.027274185363921788
WNRIRNYL	8	Unmodified	_WNRIRNYL_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF;ENST00000530567.1_1_11:64976762-64977505:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.8123046755791	2	567.811982	1133.60941	1.5607	0.00088619	-0.12762	-7.2466E-05	1.4331	0.00081373	567.8119072420676	56.404	0.95815	56.404	56.173	57.131	0					90	32	4	0	0	0	0.87935	1	23791	23791		9.3474	0	1	53556000			42142	594	20599	20688	48757	48757					0.047950760398634884
WNRIRNYL	8	Unmodified	_WNRIRNYL_					0	0	0		ENSG00000014216|ENST00000279247|CAPN1;ENST00000528165.5_1_11:64977175-64978433:+|nuORF;ENST00000530567.1_1_11:64976762-64977505:+|nuORF	ENSG00000014216|ENST00000279247|CAPN1	ENSG00000014216|ENST00000279247|CAPN1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.8133422732353	2	567.811982	1133.60941	2.0326	0.0011541	-1.6474	-0.00093543	0.38516	0.0002187	567.8110492027382	55.918	1.119	56.239	56.019	57.138	0.32088					90	38	4	0	0	0	0.87935	1	23712	23712		9.3474	0	1	59783000			42143	594	20599	20688	48758	48758					0.047950760398634884
WNRTTRWPR	9	Unmodified	_WNRTTRWPR_					0	0	0			REV__ENST00000334256.8_1_3:160254621-160283312:-|nuORF	REV__ENST00000334256.8_1_3:160254621-160283312:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1915771365166	4	318.923169	1271.66357	1.6242	0.00051799	2.6661	0.00085028	4.2903	0.0013683	319.1760438356175	73.49	0.19066	73.815	73.754	73.945	0.32494					8	5	2	0	0	0	0.11954	1	30744	30744		0.26902	0.1097	1	71758	+		42144	12460	20600	20689	48759	48759					0.03860668191464356
WNVFILAM	8	Unmodified	_WNVFILAM_					0	0	0			REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2	REV__nc|ENSG00000198399|Q9NZM3-2|ITSN2	MSMS	GG20161007_CRH_Patient100_W632_01	3	497.2643920779228	2	497.264956	992.515359	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.665	1	31.948	31.448	32.448	1.2825								0	0	0	1.0178	1	12869	12869		0.79363	0	1		+		42145	11710	20601	20690	48760	48760					0.018802208934062037
WNYHCWNEAWM	11	Unmodified	_WNYHCWNEAWM_					0	0	0		F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant;ENSG00000124491|ENST00000264870|F13A1	F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant	F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	770.3026000857353	2	770.300264	1538.58597	0.11639	8.9654E-05	-1.5836	-0.0012199	-1.4672	-0.0011302	770.7988530417407	11.213	2.2866	11.295	9.6661	11.953	0.082325					172	76	3	0	0	0	1.0395	1	4565	4565		0.30703	0	1	1398800			42146	2229	20602	20691	48761	48761					-0.16177473851257673
WNYHCWNEAWM	11	Unmodified	_WNYHCWNEAWM_					0	0	0		F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant;ENSG00000124491|ENST00000264870|F13A1	F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant	F13A1|p.T497Dfs*8|1|0.03|ENSG00000124491|chr6:6174838-6174839|-/C|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	770.8011352419853	2	770.300264	1538.58597	-0.96152	-0.00074066	1.257	0.00096828	0.29549	0.00022762	770.3029451765918	10.73	1.708	11.399	10.242	11.95	0.66934					124	57	3	0	0	0	1.0366	1	4442	4442		1.1933	0	1	2710300			42147	2229	20602	20691	48762	48762					-0.16177473851257673
WPAAYLAVV	9	Unmodified	_WPAAYLAVV_					0	0	0		ENST00000416671.5_1_22:29137938-29138193:-|nuORF	ENST00000416671.5_1_22:29137938-29138193:-|nuORF	ENST00000416671.5_1_22:29137938-29138193:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	989.5499755740166	1	989.54548	988.538203	2.1333	0.002111	-0.83019	-0.00082151	1.3031	0.0012895	989.5450876645971	82.554	0.33876	82.554	82.308	82.646	0					19	10	2	0	0	0	0.64949	1	34329	34329		9.3474	0.75416	1	1470800			42148	6410	20603	20692	48763	48763					0.043475632825106914
WPAWVYCT	8	Unmodified	_WPAWVYCT_					0	0	0		ENSG00000164778|ENST00000297375|EN2;ENSG00000163064|ENST00000295206|EN1	ENSG00000164778|ENST00000297375|EN2	ENSG00000164778|ENST00000297375|EN2	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	512.8291503787041	2	513.231113	1024.44767	2.3666	0.0012146	0.15972	8.1975E-05	2.5263	0.0012966	513.2312658959847	82.352	0.33916	82.352	82.216	82.555	0					25	10	3	0	0	0	2.3239	1	34359	34359		6.3541	0	1	1979000			42149	3661	20604	20693	48764	48764					-0.063572290374168
WPDEEELL	8	Unmodified	_WPDEEELL_					0	0	0			REV__ENST00000524928.1_1_11:47436156-47436711:+|nuORF	REV__ENST00000524928.1_1_11:47436156-47436711:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	344.1645995974541	3	344.16244	1029.46549	1.6915	0.00058215	1.4218	0.00048933	3.1133	0.0010715	344.1639192701377	84.2	0.36433	85.819	85.604	85.968	1.6192					33	11	4	0	0	0	0.88504	1	35281	35281		3.9444	0.3479	1	4909800	+		42150	13652	20605	20694	48765	48765					-0.048062353015666304
WPEGHFATITL	11	Unmodified	_WPEGHFATITL_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	636.3271362185478	2	636.324588	1270.63462	2.7178	0.0017294	0.21177	0.00013476	2.9296	0.0018641	636.3250140243453	64.393	0.82755	65.8	65.466	66.293	1.4071					69	26	3	0	0	0	0.03428	3	26971	26971;27017;27072		75.761	33.805	1	3520300			42151	1290	20606	20695	48766;48767;48768	48766					0.010130860517847395
WPEGHFATITL	11	Unmodified	_WPEGHFATITL_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	636.3261596560478	2	636.324588	1270.63462	2.423	0.0015418	0.24116	0.00015346	2.6642	0.0016953	636.3247940254258	63.84	0.86868	65.768	65.457	66.325	1.928					72	27	3	0	0	0	0.027444	3	26745	26745;26798;26892		85.642	43.686	1	3623100			42152	1290	20606	20695	48769;48770;48771	48769					0.010130860517847395
WPGFLPQT	8	Unmodified	_WPGFLPQT_					0	0	0		ENST00000447869.5_1_11:8496459-8496576:-|nuORF	ENST00000447869.5_1_11:8496459-8496576:-|nuORF	ENST00000447869.5_1_11:8496459-8496576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	945.4874145388603	1	945.482879	944.475603	2.7607	0.0026102	0.2977	0.00028147	3.0584	0.0028917	945.4825853219631	61.249	0.39722	62.667	62.407	62.804	1.4177					22	12	2	0	0	0	0.6384	1	25738	25738		36.466	7.9793	1	3066800			42153	6589	20607	20696	48772	48772					0.0011441721431992846
WPGFLPQT	8	Unmodified	_WPGFLPQT_					0	0	0		ENST00000447869.5_1_11:8496459-8496576:-|nuORF	ENST00000447869.5_1_11:8496459-8496576:-|nuORF	ENST00000447869.5_1_11:8496459-8496576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	945.4807006716728	1	945.482879	944.475603	3.3687	0.003185	-1.9006	-0.001797	1.468	0.001388	945.4814335986828	60.739	0.42953	62.704	62.451	62.881	1.9653					27	13	3	0	0	0	0.59872	1	25434	25434		40.449	0.49126	1	2444500			42154	6589	20607	20696	48773	48773					0.0011441721431992846
WPGVVGIKY	9	Unmodified	_WPGVVGIKY_					0	0	0			REV__ENSG00000101890|ENST00000218006|GUCY2F	REV__ENSG00000101890|ENST00000218006|GUCY2F	MSMS	GG20161007_CRH_Patient100_A02_02	2	340.1969482302666	3	340.195527	1017.56475	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.528	1	37.833	37.333	38.333	0.30497								0	0	0	0.42693	1	15784	15784		0.26902	0	1		+		42155	9048	20608	20697	48774	48774					0.056672521738505566
WPHKLPFPRCH	11	Unmodified	_WPHKLPFPRCH_					0	0	0		ENST00000264033.5_1_11:119149415-119156175:+|nuORF	ENST00000264033.5_1_11:119149415-119156175:+|nuORF	ENST00000264033.5_1_11:119149415-119156175:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	473.2494689822197	3	473.24852	1416.72373	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.28	1	105.28	104.78	105.78	0								0	0	0	0.63775	1	44651	44651		0	0	1				42156	5646	20609	20698	48775	48775					0.032036425303431315
WPKLRVRRP	9	Unmodified	_WPKLRVRRP_					0	0	0			REV__nc|ENSG00000128604|Q13568-5|IRF5	REV__nc|ENSG00000128604|Q13568-5|IRF5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	302.1941100955009	4	302.693821	1206.74618	0.79031	0.00023922	2.8252	0.00085518	3.6155	0.0010944	302.6943445267871	36.698	0.39462	37	36.668	37.063	0.30197					42	25	3	0	0	0	0.11955	1	15446	15446		0.23584	0.028987	1	1400100	+		42157	9734	20610	20699	48776	48776					0.15107609990263882
WPKLRVRRP	9	Unmodified	_WPKLRVRRP_					0	0	0			REV__nc|ENSG00000128604|Q13568-5|IRF5	REV__nc|ENSG00000128604|Q13568-5|IRF5	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	302.693821	1206.74618	-2.4408	-0.00073881	5.0094	0.0015163	2.5686	0.0007775	302.6953146386433	37.243	0.80466	37.243	36.795	37.599	0	0.12169	0.0012802	NaN	0.23584	45	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2512800	+		42158	9734	20610	20699							0.15107609990263882
WPKRSLRKADV	11	Unmodified	_WPKRSLRKADV_					0	0	0		MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant;nc|ENSG00000148773|P46013-2|MKI67;MKI67|p.R2903Efs*7|1|0.07|ENSG00000148773|chr10:128103134-128103135|-/T|frameshift_variant;MKI67|p.D2897Gfs*53|1|0.03|ENSG00000148773|chr10:128103129-128103150|TGTCTCCTGCTGCCAATTACAT/-|frameshift_variant;ENSG00000148773|ENST00000368654|MKI67;MKI67|p.G1790Rfs*43|1|0.03|ENSG00000148773|chr10:128106473-128106474|-/TTTCCCTG|frameshift_variant	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MKI67|p.K2670Nfs*23|1|0.03|ENSG00000148773|chr10:128103824-128103836|CTTTTCCTTAGGT/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	451.9350463747978	3	452.601727	1354.78335	3.116	0.0014103	-1.456	-0.00065901	1.66	0.00075131	452.60086194432563	84.832	0.3511	85.093	84.886	85.237	0.26083					14	10	2	0	0	0	0.14606	1	35414	35414		0.40827	0.26837	1	320580			42159	3220	20611	20700	48777	48777					0.12015236745355651
WPKSKCYD	8	Unmodified	_WPKSKCYD_					0	0	0		nc|ENSG00000203877|Q5TAB7-2|RIPPLY2;ENSG00000203877|ENST00000369689|RIPPLY2	nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	nc|ENSG00000203877|Q5TAB7-2|RIPPLY2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	514.3007690310478	2	513.739302	1025.46405	1.5324	0.00078723	-2.6725	-0.001373	-1.1401	-0.00058573	513.7376200686039	67.288	0.3633	69.16	68.938	69.301	1.8718					41	11	5	0	0	0	2.3239	1	28290	28290		14.582	5.9884	1	3897400			42160	5118	20612	20701	48778	48778					-0.04766147871305293
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605102419853	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.7954	1	7.5262	7.0262	8.0262	0.73074								0	0	0	1.0178	1	2822	2822		0.40072	0	1		+		42161	14686	20613	20702	48779	48779					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605712771416	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.8939	1	7.6246	7.1246	8.1246	0.73074								0	0	0	1.0178	1	2863	2863		0.40072	0	1		+		42162	14686	20613	20702	48780	48780					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1603576540947	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	6.9909	1	7.7216	7.2216	8.2216	0.73074								0	0	0	1.0178	1	2903	2903		0.40072	0	1		+		42163	14686	20613	20702	48781	48781					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1606323122978	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.2124	1	7.9431	7.4431	8.4431	0.73074								0	0	0	1.0178	1	2996	2996		0.40072	0	1		+		42164	14686	20613	20702	48782	48782					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605407595634	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3224	1	8.0531	7.5531	8.5531	0.73074								0	0	0	1.0178	1	3042	3042		0.40072	0	1		+		42165	14686	20613	20702	48783	48783					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1604186892509	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4292	1	8.1599	7.6599	8.6599	0.73074								0	0	0	1.0178	1	3085	3085		0.40072	0	1		+		42166	14686	20613	20702	48784	48784					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1602966189384	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5459	1	8.2767	7.7767	8.7767	0.73074								0	0	0	1.0178	1	3134	3134		0.40072	0	1		+		42167	14686	20613	20702	48785	48785					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1605712771416	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6402	1	8.371	7.871	8.871	0.73074								0	0	0	1.0178	1	3173	3173		0.40072	0	1		+		42168	14686	20613	20702	48786	48786					-0.031852890225763986
WPLAFGYE	8	Unmodified	_WPLAFGYE_					0	0	0			REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	REV__tr|A0A553SF38|A0A553SF38_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08185PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1603881716728	3	328.160483	981.459619	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.8261	1	8.5569	8.0569	9.0569	0.73074								0	0	0	1.0178	1	3251	3251		0.40072	0	1		+		42169	14686	20613	20702	48787	48787					-0.031852890225763986
WPLRLVLLW	9	Unmodified	_WPLRLVLLW_					0	0	0			REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	REV__nc|ENSG00000154305|Q5JRA6-2|MIA3	MSMS	GG20161007_CRH_Patient100_W632_01	3	399.2499572634697	3	399.249855	1194.72774	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.066	1	29.345	28.845	29.845	1.2789								0	0	0	0.42693	1	11763	11763		0.26902	0.033176	1		+		42170	10472	20614	20703	48788	48788					0.13816055295683327
WPLYPQTSL	9	Unmodified	_WPLYPQTSL_					0	0	0		ENST00000588643.1_1_17:74036870-74037056:-|nuORF	ENST00000588643.1_1_17:74036870-74037056:-|nuORF	ENST00000588643.1_1_17:74036870-74037056:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7950927615166	2	552.78985	1103.56515	4.9883	0.0027575	2.7592	0.0015252	7.7475	0.0042827	552.7910626857902	87.977	0.25334	89.033	88.827	89.08	1.0562					10	7	2	0	0	0	0.75267	1	37112	37112		5.2307	0	1	677240			42171	7468	20615	20704	48789	48789					0.01750627103047009
WPPRACCAA	9	Unmodified	_WPPRACCAA_					0	0	0			REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	974.4377319216728	1	974.433503	973.426227	3.0813	0.0030026	-0.23296	-0.00022701	2.8484	0.0027756	974.4338618501927	105.06	0.092506	105.22	105.16	105.25	0.15859					9	3	3	0	0	0	0.85403	1	44655	44655		0	0	1	185320000	+		42172	13011	20616	20705	48790	48790					-0.061549373377943084
WPPRACCAA	9	Unmodified	_WPPRACCAA_					0	0	0			REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	974.433503	973.426227	3.0813	0.0030026	-0.23296	-0.00022701	2.8484	0.0027756	974.4338618501927	105.06	0.092506	105.22	105.16	105.25	0.15859	0.010011	-0.00045946	NaN	0	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	185320000	+		42173	13011	20616	20705							-0.061549373377943084
WPPRACCAA	9	Unmodified	_WPPRACCAA_					0	0	0			REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	REV__ENST00000428314.5_1_2:128394456-128394912:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	974.433503	973.426227	3.0671	0.0029887	0.52595	0.0005125	3.593	0.0035012	974.4340812764307	105.03	0.092194	105.2	105.14	105.23	0.16679	-0.010011	0.00028005	NaN	0	10	3	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	196300000	+		42174	13011	20616	20705							-0.061549373377943084
WPRKIHGL	8	Unmodified	_WPRKIHGL_					0	0	0			REV__ENSG00000125255|ENST00000245312|SLC10A2	REV__ENSG00000125255|ENST00000245312|SLC10A2	MSMS	GG20161007_CRH_Patient100_A02_01	1	336.2015869021416	3	336.203016	1005.58722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.793	1	32.793	32.293	33.293	0								0	0	0	1.0178	1	13739	13739		0.40072	0	1		+		42175	9661	20617	20706	48791	48791					0.0846489636211345
WPRKIHGL	8	Unmodified	_WPRKIHGL_					0	0	0			REV__ENSG00000125255|ENST00000245312|SLC10A2	REV__ENSG00000125255|ENST00000245312|SLC10A2	MSMS	GG20161007_CRH_Patient100_A02_02	2	336.2016174197197	3	336.203016	1005.58722	NaN	NaN	NaN	NaN	NaN	NaN	NaN	37.596	1	37.901	37.401	38.401	0.30497								0	0	0	1.0178	1	15813	15813		0.40072	0	1		+		42176	9661	20617	20706	48792	48792					0.0846489636211345
WPRLQVRP	8	Unmodified	_WPRLQVRP_					0	0	0		ENST00000371370.7_1_1:54411767-54412118:+|nuORF	ENST00000371370.7_1_1:54411767-54412118:+|nuORF	ENST00000371370.7_1_1:54411767-54412118:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	351.2115966677666	3	351.210171	1050.60868	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.912	1	53.235	52.735	53.735	0.32283								0	0	0	1.0178	1	22167	22167		0.40072	0	1				42177	6126	20618	20707	48793	48793					0.08540281390855853
WPVGGDSRFVF	11	Unmodified	_WPVGGDSRFVF_					0	0	0		nc|ENSG00000141738|Q14451-2|GRB7;nc|ENSG00000141738|Q14451-4|GRB7;ENSG00000141738|ENST00000309156|GRB7;nc|ENSG00000141738|Q14451-3|GRB7;ENST00000461756.1_1_17:37899195-37899563:+|nuORF	nc|ENSG00000141738|Q14451-2|GRB7	nc|ENSG00000141738|Q14451-2|GRB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.8185912966728	2	633.81693	1265.61931	1.9894	0.0012609	-1.1529	-0.00073075	0.83648	0.00053018	633.816108769437	65.637	1.7227	67.036	66.663	68.386	1.3989					95	55	3	0	0	0	0.19131	5	27635	27491;27549;27635;27751;27803		40.725	25.476	1	2506700			42178	2975	20619	20708	48794;48795;48796;48797;48798	48796					-0.0028778074540696252
WPVGGDSRFVF	11	Unmodified	_WPVGGDSRFVF_					0	0	0		nc|ENSG00000141738|Q14451-2|GRB7;nc|ENSG00000141738|Q14451-4|GRB7;ENSG00000141738|ENST00000309156|GRB7;nc|ENSG00000141738|Q14451-3|GRB7;ENST00000461756.1_1_17:37899195-37899563:+|nuORF	nc|ENSG00000141738|Q14451-2|GRB7	nc|ENSG00000141738|Q14451-2|GRB7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8181640505791	2	633.81693	1265.61931	1.336	0.0008468	-0.8318	-0.00052721	0.50423	0.00031959	633.8160384156648	65.17	1.5133	67.078	66.72	68.234	1.9085					96	48	3	0	0	0	0.21817	5	27412	27308;27359;27412;27465;27527		38.615	19.463	1	2429300			42179	2975	20619	20708	48799;48800;48801;48802;48803	48801					-0.0028778074540696252
WPVGGDSRFVF	11	Unmodified	_WPVGGDSRFVF_					0	0	0		nc|ENSG00000141738|Q14451-2|GRB7;nc|ENSG00000141738|Q14451-4|GRB7;ENSG00000141738|ENST00000309156|GRB7;nc|ENSG00000141738|Q14451-3|GRB7;ENST00000461756.1_1_17:37899195-37899563:+|nuORF	nc|ENSG00000141738|Q14451-2|GRB7	nc|ENSG00000141738|Q14451-2|GRB7	MSMS	GG20161007_CRH_Patient100_W632_02	4	633.8218261599541	2	633.81693	1265.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.959	1	67.868	67.368	68.368	1.9085								0	0	0	0.26559	1	27671	27671		37.075	20.926	1				42180	2975	20619	20708	48804	48804					-0.0028778074540696252
WPVGNRTETD	10	Unmodified	_WPVGNRTETD_					0	0	0			REV__ENST00000483664.5_2_7:150107254-150107353:+|nuORF	REV__ENST00000483664.5_2_7:150107254-150107353:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	587.7772704958916	2	587.778002	1173.54145	1.3794	0.00081076	-2.8	-0.0016458	-1.4206	-0.00083501	587.7763575455875	29.133	0.82528	29.133	28.628	29.453	0					74	26	4	0	0	0	0.76954	1	12174	12174		15.248	0.8431	1	3260000	+		42181	13381	20620	20709	48805	48805					-0.03837838401409499
WPVVYIWDVN	10	Unmodified	_WPVVYIWDVN_					0	0	0			REV__nc|ENSG00000249948|Q9H227|GBA3	REV__nc|ENSG00000249948|Q9H227|GBA3	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885070681572	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.0812	1	5.0812	4.5812	5.5812	0								0	0	0	0.66254	1	2087	2087		0.15932	0	1		+		42182	14551	20621	20710	48806	48806					0.011222740571838585
WQDLEESL	8	Unmodified	_WQDLEESL_					0	0	0		ENST00000479882.5_1_3:113775696-113785086:+|nuORF;ENST00000466050.5_1_3:113775696-113789591:+|nuORF;nc|ENSG00000151576|Q9H974-4|QTRT2	ENST00000479882.5_1_3:113775696-113785086:+|nuORF	ENST00000479882.5_1_3:113775696-113785086:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	340.4955322146416	3	340.49419	1018.46074	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.146	1	72.488	71.988	72.988	1.3415								0	0	0	1.0178	1	29856	29856		6.7232	0	1				42183	6703	20622	20711	48807	48807					-0.047751194443321765
WQDREKPSE	9	Unmodified	_WQDREKPSE_					0	0	0		nc|ENSG00000155893|Q8TE99-2|PXYLP1;ENSG00000155893|ENST00000286353|PXYLP1	nc|ENSG00000155893|Q8TE99-2|PXYLP1	nc|ENSG00000155893|Q8TE99-2|PXYLP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	587.7773925662041	2	587.778002	1173.54145	0.94889	0.00055773	-2.3081	-0.0013566	-1.3592	-0.00079889	587.776668402452	28.843	0.82115	29.122	28.619	29.441	0.2793					75	26	4	0	0	0	0.55689	2	11944	11944;12138		13.042	0.80181	1	2981700			42184	3432	20623	20712	48808;48809	48808					-0.038378384014322364
WQFLIVLV	8	Unmodified	_WQFLIVLV_					0	0	0		ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	ENSG00000116138|ENST00000375847|DNAJC16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	509.3127929568291	2	509.310221	1016.60589	2.027	0.0010324	2.7564	0.0014039	4.7834	0.0024362	509.31164630594265	77.614	0.37148	77.614	77.44	77.811	0					27	11	3	0	0	0	0.89176	1	32288	32288		0.79363	0	1	3517500			42185	1952	20624	20713	48810	48810					0.09825013213333023
WQIAGLLFL	9	Unmodified	_WQIAGLLFL_					0	0	0			REV__nc|ENSG00000278570|Q9Y5X4-2|NR2E3	REV__nc|ENSG00000278570|Q9Y5X4-2|NR2E3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	531.8185912966728	2	530.813128	1059.6117	1.9511	0.0010357	2.6462	0.0014046	4.5973	0.0024403	530.8145629135761	68.579	2.293	70.432	69.441	71.734	1.853					224	73	6	0	0	0	0.76456	1	28566	28566		4.756	1.8668	1	13483000	+		42186	12024	20625	20714	48811	48811					0.0842811172499296
WQIIKWITKK	10	Unmodified	_WQIIKWITKK_					0	0	0		tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	tr|A0A7D6VTH0|A0A7D6VTH0_9CLOTCyclicbeta1-2glucansynthetaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4100219607353	2	672.41354	1342.81253	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.806	1	84.018	83.518	84.518	1.2125								0	0	0	0.66237	1	34756	34756		0.45834	0.15131	1				42187	16917	20626	20715	48812	48812					0.15483381041599387
WQIRTVKLIRY	11	Unmodified	_WQIRTVKLIRY_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	738.4508544802666	2	738.445903	1474.87725	2.5728	0.0018999	2.7826	0.0020548	5.3554	0.0039547	738.4477450434897	88.972	1.2538	88.972	88.304	89.558	0					68	39	2	0	0	0	1.0393	3	37180	37180;37228;37291		0.35063	0.043601	1	1430200			42188	1603	20627	20716	48813;48814;48815	48813					0.15880955847660516
WQIRTVKLIRY	11	Unmodified	_WQIRTVKLIRY_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6369201540947	3	492.633027	1474.87725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.516	1	88.516	88.016	89.016	0								0	0	0	0.63775	1	37007	37007		0.40827	0.31342	1				42189	1603	20627	20716	48816	48816					0.15880955847660516
WQIRTVKLIRY	11	Unmodified	_WQIRTVKLIRY_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6359435915947	3	492.633027	1474.87725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.64	1	88.64	88.14	89.14	0								0	0	0	0.63775	1	37059	37059		0.094841	0.094841	1				42190	1603	20627	20716	48817	48817					0.15880955847660516
WQIRTVKLIRY	11	Unmodified	_WQIRTVKLIRY_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6359741091728	3	492.633027	1474.87725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.285	1	89.285	88.785	89.785	0								0	0	0	0.63775	1	37322	37322		0.40827	0.32491	1				42191	1603	20627	20716	48818	48818					0.15880955847660516
WQIRTVKLIRY	11	Unmodified	_WQIRTVKLIRY_					0	0	0		nc|ENSG00000107593|Q9P0L9-3|PKD2L1;nc|ENSG00000107593|Q9P0L9-2|PKD2L1;nc|ENSG00000107593|Q9P0L9-5|PKD2L1;ENSG00000107593|ENST00000318222|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	nc|ENSG00000107593|Q9P0L9-3|PKD2L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	492.6367980837822	3	492.633027	1474.87725	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.406	1	89.406	88.906	89.906	0								0	0	0	0.63775	1	37372	37372		0.094841	0	1				42192	1603	20627	20716	48819	48819					0.15880955847660516
WQKANKLVIR	10	Unmodified	_WQKANKLVIR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3851196169853	2	628.385314	1254.75608	2.0882	0.0013122	-2.9952	-0.0018821	-0.90704	-0.00056997	628.383629909381	78.048	0.72401	78.048	77.717	78.441	0					41	22	2	0	0	0	0.89803	2	32397	32397;32464		1.6526	0.17072	1	1047600			42193	3425;7900	20628	20717	48820;48821	48820					0.13888753204946624
WQKANKLVIR	10	Unmodified	_WQKANKLVIR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3843871951103	2	628.385314	1254.75608	2.2941	0.0014416	-3.1637	-0.001988	-0.86965	-0.00054647	628.3829792650313	75.742	0.37366	76.064	75.835	76.209	0.32163					24	11	3	0	0	0	0.87699	1	31698	31698		3.9444	2.4625	1	958560			42194	3425;7900	20628	20717	48822	48822					0.13888753204946624
WQKANKLVIR	10	Unmodified	_WQKANKLVIR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3840820193291	2	628.385314	1254.75608	1.7672	0.0011105	-3.0211	-0.0018984	-1.2539	-0.00078794	628.3832686380024	77.87	0.72878	78.18	77.912	78.641	0.30933					55	22	3	0	0	0	0.89803	1	32595	32595		1.6526	0.32309	1	1194800			42195	3425;7900	20628	20717	48823	48823					0.13888753204946624
WQKANKLVIR	10	Unmodified	_WQKANKLVIR_					0	0	0		ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-12|TTN;TTN|p.L33528Pfs*5|1|0.39|ENSG00000155657|chr2:178531097-178531109|GCAGAAGTACTTA/-|frameshift_variant;TTN|p.K33182Qfs*13|1|0.07|ENSG00000155657|chr2:178532148-178532149|-/G|frameshift_variant;TTN|p.L33064Hfs*53|1|0.04|ENSG00000155657|chr2:178532501-178532502|-/AACCTTGCAGACTCGCCCTCGTAGACGGTCAT|frameshift_variant;TTN|p.Y33007Hfs*12|1|0.05|ENSG00000155657|chr2:178532673-178532674|-/TTCTCAGTGTGATTCGAGGGGCATG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-13|TTN;TTN|p.A30902Cfs*9|1|0.13|ENSG00000155657|chr2:178541450-178541451|-/A|frameshift_variant;nc|ENSG00000155657|Q8WZ42-2|TTN;TTN|p.P29906Sfs*3|1|0.14|ENSG00000155657|chr2:178546788-178546789|GG/-|frameshift_variant;nc|ENSG00000155657|Q8WZ42|TTN;nc|ENSG00000155657|Q8WZ42-8|TTN;TTN|p.T29195Kfs*3|1|0.04|ENSG00000155657|chr2:178549119-178549119|G/-|frameshift_variant;TTN|p.V29729Sfs*26|1|0.25|ENSG00000155657|chr2:178547519-178547519|T/-|frameshift_variant;TTN|p.D29641Kfs*14|1|0.07|ENSG00000155657|chr2:178547783-178547784|-/AGAATTGTATTACGTTCTTT|frameshift_variant;TTN|p.T29630Ifs*12|1|0.03|ENSG00000155657|chr2:178547814-178547815|-/A|frameshift_variant;TTN|p.L29632Hfs*2|1|0.03|ENSG00000155657|chr2:178547813-178547814|-/TA|frameshift_variant;TTN|p.I29382Tfs*15|1|0.03|ENSG00000155657|chr2:178548558-178548559|-/CACCACATAGTCTTTGTTGACACGTG|frameshift_variant;nc|ENSG00000155657|Q8WZ42-5|TTN;nc|ENSG00000155657|Q8WZ42-3|TTN;nc|ENSG00000155657|Q8WZ42-9|TTN;nc|ENSG00000155657|Q8WZ42-10|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN;nc|ENSG00000155657|Q8WZ42-4|TTN;nc|ENSG00000155657|Q8WZ42-7|TTN	ENSG00000155657|ENST00000589042|TTN;nc|ENSG00000155657|Q8WZ42-11|TTN	ENSG00000155657|ENST00000589042|TTN	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	628.385314	1254.75608	2.3663	0.001487	-4.2012	-0.00264	-1.8349	-0.001153	628.3816725162881	74.608	0.2556	76.39	76.195	76.45	1.7817	0.22976	-0.00072638	NaN	3.9444	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	713450			42196	3425;7900	20628	20717							0.13888753204946624
WQKGLLKKGPG	11	Unmodified	_WQKGLLKKGPG_					0	0	0		nc|ENSG00000147036|Q6ZV70-2|LANCL3;ENSG00000147036|ENST00000378619|LANCL3	nc|ENSG00000147036|Q6ZV70-2|LANCL3	nc|ENSG00000147036|Q6ZV70-2|LANCL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	606.3693725466728	2	606.36659	1210.71863	2.1933	0.0013299	3.1672	0.0019205	5.3605	0.0032504	606.3676705113386	74.993	1.614	74.993	74.014	75.628	0					92	50	3	0	0	0	1.0357	1	31149	31149		1.4819	0	1	2132600			42197	3169	20629	20718	48824	48824					0.12169661939356047
WQKLIVWKFPP	11	Unmodified	_WQKLIVWKFPP_					0	0	0		nc|ENSG00000086827|O43264-2|ZW10;ENSG00000086827|ENST00000200135|ZW10	nc|ENSG00000086827|O43264-2|ZW10	nc|ENSG00000086827|O43264-2|ZW10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.2845947146416	3	481.283336	1440.82818	2.6329	0.0012672	-0.087928	-4.2318E-05	2.545	0.0012249	481.2828511221248	89.071	1.161	89.071	88.334	89.495	0					95	36	3	0	0	0	1.0388	2	37306	37306;37358		0.50596	0	1	4938900			42198	1077	20630	20719	48825;48826	48825					0.1253966755868987
WQKLIVWKFPP	11	Unmodified	_WQKLIVWKFPP_					0	0	0		nc|ENSG00000086827|O43264-2|ZW10;ENSG00000086827|ENST00000200135|ZW10	nc|ENSG00000086827|O43264-2|ZW10	nc|ENSG00000086827|O43264-2|ZW10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2842285037041	3	481.283336	1440.82818	3.4154	0.0016438	-0.12055	-5.802E-05	3.2948	0.0015858	481.28287493317043	88.925	1.4158	89.149	88.809	90.224	0.22359					101	43	3	0	0	0	1.0402	1	37195	37195		0.094841	0	1	2949300			42199	1077	20630	20719	48827	48827					0.1253966755868987
WQKLRHITL	9	Unmodified	_WQKLRHITL_					0	0	0		tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	tr|A0A553SFH6|A0A553SFH6_NIACISugarABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_08790PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8582641482353	2	597.858932	1193.70331	2.285	0.0013661	-3.5671	-0.0021326	-1.2821	-0.00076652	597.8564739538344	75.581	0.80588	75.902	75.678	76.484	0.32164					58	25	3	0	0	0	0.84963	1	31781	31781		0.6015	0.076735	1	1165200			42200	16056	20631	20720	48828	48828					0.11420795142180395
WQKRIREKL	9	Unmodified	_WQKRIREKL_					0	0	0			REV__ENSG00000135837|ENST00000367607|CEP350	REV__ENSG00000135837|ENST00000367607|CEP350	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	628.3832885622978	2	628.882939	1255.75132	2.2357	0.001406	1.3967	0.00087838	3.6325	0.0022844	628.8836138818998	76.003	0.22034	76.324	76.144	76.364	0.32163					10	6	2	0	0	0	0.11946	1	31754	31754		0.6015	0.076735	1	441320	+		42201	9956	20632	20721	48829	48829					0.13367869062199134
WQLKKKSCL	9	Unmodified	_WQLKKKSCL_					0	0	0		DDHD2|p.W598Gfs*57|1|0.03|ENSG00000085788|chr8:38253027-38253028|-/GG|frameshift_variant	DDHD2|p.W598Gfs*57|1|0.03|ENSG00000085788|chr8:38253027-38253028|-/GG|frameshift_variant	DDHD2|p.W598Gfs*57|1|0.03|ENSG00000085788|chr8:38253027-38253028|-/GG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3316528201103	2	567.328619	1132.64269	2.1376	0.0012127	1.6104	0.00091361	3.7479	0.0021263	567.3293379482881	76.171	1.2438	76.492	76.272	77.516	0.32163					84	39	3	0	0	0	0.84963	2	31999	31999;32050		0.6015	0	1	2653400			42202	396	20633	20722	48830;48831	48830					0.08166941767581193
WQLPTKLP	8	Unmodified	_WQLPTKLP_					0	0	0			REV__nc|ENSG00000140839|Q6UXF7-2|CLEC18B	REV__nc|ENSG00000140839|Q6UXF7-2|CLEC18B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	491.7920410037041	2	491.789653	981.564752	1.5304	0.00075262	3.1705	0.0015592	4.7009	0.0023119	491.7911754782824	79.037	0.48094	79.037	78.756	79.237	0					41	15	3	0	0	0	0.89008	1	32872	32872		2.5775	0.27475	1	17292000	+		42203	13953	20634	20723	48832	48832					0.07323252173830497
WQLQARQR	8	Unmodified	_WQLQARQR_					0	0	0		ENSG00000177084|ENST00000320574|POLE;ENST00000537064.5_1_12:133201285-133234573:-|nuORF	ENSG00000177084|ENST00000320574|POLE	ENSG00000177084|ENST00000320574|POLE	MSMS	GG20161007_CRH_Patient100_A02_01	1	543.3016235232353	2	543.301781	1084.58901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.856	1	41.856	41.356	42.356	0								0	0	0	1.0178	1	17518	17518		2.5775	0.51773	1				42204	4433	20635	20724	48833	48833					0.05009905380074997
WQNLHVCT	8	Unmodified	_WQNLHVCT_					0	0	0			REV__ENSG00000118965|ENST00000281405|WDR35	REV__ENSG00000118965|ENST00000281405|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	500.7386962771416	2	500.737094	999.459635	1.7744	0.0008885	0.32106	0.00016077	2.0954	0.0010493	500.73750974449314	64.865	0.28613	64.865	64.722	65.008	0					14	8	2	0	0	0	0.89008	1	27071	27071		2.5775	0.51773	1	836710	+		42205	9528	20636	20725	48834	48834					-0.04011612294232236
WQRHLYRHEYQ	11	Unmodified	_WQRHLYRHEYQ_					0	0	0			REV__chr6:32847156-32847919|96|73.15|0.0|22.8|-|0|None,TAP1|1	REV__chr6:32847156-32847919|96|73.15|0.0|22.8|-|0|None,TAP1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	324.0282165408134	5	323.963355	1614.78039	-2.1618	-0.00070035	0.5183	0.00016791	-1.6435	-0.00053244	323.96337280194	67.279	0.11728	67.279	67.231	67.349	0					5	3	2	0	0	0	0.14606	1	28045	28045		0	0	1	404940	+		42206	8334	20637	20726	48835	48835					-0.0024063837943231192
WQRPQKRKR	9	Unmodified	_WQRPQKRKR_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8838378787041	2	641.883804	1281.75306	2.0667	0.0013266	-2.2079	-0.0014172	-0.14117	-9.0616E-05	641.8822617428297	78.111	0.63029	78.111	77.811	78.441	0					31	19	2	0	0	0	0.84963	1	32512	32512		0.6015	0.14316	1	1347600	+		42207	12461	20638	20727	48836	48836					0.1234492287080684
WQRPQKRKR	9	Unmodified	_WQRPQKRKR_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	641.8845092654228	2	641.883804	1281.75306	2.1395	0.0013733	-1.6306	-0.0010466	0.50898	0.00032671	641.882756461577	80.074	0.93571	80.074	79.856	80.791	0					67	29	3	0	0	0	0.84963	2	33372	33372;33565		0.6015	0.14316	1	1307900	+		42208	12461	20638	20727	48837;48838	48837					0.1234492287080684
WQRPQKRKR	9	Unmodified	_WQRPQKRKR_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	641.8842040896416	2	641.883804	1281.75306	2.0535	0.0013181	-0.031721	-2.0361E-05	2.0218	0.0012977	641.884389290759	78.613	0.47294	78.613	78.283	78.756	0					22	14	2	0	0	0	0.11946	1	32620	32620		0.6015	0.14316	1	856900	+		42209	12461	20638	20727	48839	48839					0.1234492287080684
WQRPQKRKR	9	Unmodified	_WQRPQKRKR_					0	0	0			REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	REV__ENST00000334268.8_1_6:123658775-123687324:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	641.8849975466728	2	641.883804	1281.75306	1.6316	0.0010473	-1.3971	-0.00089678	0.23454	0.00015055	641.8828007083423	78.952	1.372	79.261	78.674	80.046	0.30933					119	43	3	0	0	0	0.84963	1	32870	32870		0.6015	0.14316	1	3189400	+		42210	12461	20638	20727	48840	48840					0.1234492287080684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	743.4368774294853	2	743.432461	1484.85037	2.3609	0.0017551	4.4878	0.0033364	6.8487	0.0050915	743.4363704283285	90.666	0.74271	90.666	90.382	91.125	0					37	23	2	0	0	0	1.0393	1	37918	37918		0.35063	0.043601	1	1275200	+		42211	13500	20639	20728	48841	48841					0.12733847236472684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9605590701103	3	495.9574	1484.85037	3.2753	0.0016244	2.2236	0.0011028	5.4989	0.0027272	495.9585910148389	90.552	1.9189	90.761	90.049	91.968	0.20904					125	59	3	0	0	0	1.0393	1	37940	37940		0.50596	0.051438	1	2352600	+		42212	13500	20639	20728	48842	48842					0.12733847236472684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.9617187380791	3	495.9574	1484.85037	4.4246	0.0021944	2.642	0.0013103	7.0666	0.0035047	495.9586211902955	89.724	1.8971	91.128	90.201	92.098	1.4045					113	59	3	0	0	0	1.0393	3	37692	37692;37755;37806		0.50596	0.4226	1	2698900	+		42213	13500	20639	20728	48843;48844;48845	48843					0.12733847236472684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	743.432461	1484.85037	2.3609	0.0017551	4.4878	0.0033364	6.8487	0.0050915	743.4363704283285	90.666	0.74271	90.666	90.382	91.125	0	-0.15611	0.00092904	NaN	0.35063	37	23	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1275200	+		42214	13500	20639	20728							0.12733847236472684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	743.432461	1484.85037	2.6051	0.0019367	3.7309	0.0027737	6.336	0.0047104	743.4350149441161	90.56	1.1105	90.769	90.081	91.192	0.20904	-0.053308	-0.00019636	NaN	0.35063	51	34	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	789110	+		42215	13500	20639	20728							0.12733847236472684
WQTKIERWLLL	11	Unmodified	_WQTKIERWLLL_					0	0	0			REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	REV__ENST00000499900.2_1_5:177045699-177046068:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	743.432461	1484.85037	3.8815	0.0028856	3.159	0.0023485	7.0405	0.0052341	743.4343705064159	89.627	0.41244	91.032	90.828	91.24	1.4045	0.20942	-0.0010467	NaN	0.35063	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	487620	+		42216	13500	20639	20728							0.12733847236472684
WQVQRKVICIP	11	Unmodified	_WQVQRKVICIP_					0	0	0		ENST00000473038.5_1_1:46033610-46035625:+|nuORF;ENSG00000117448|ENST00000351829|AKR1A1;ENST00000487654.5_1_1:46033819-46034819:+|nuORF	ENST00000473038.5_1_1:46033610-46035625:+|nuORF	ENST00000473038.5_1_1:46033610-46035625:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	343.5354797244072	4	343.199779	1368.77001	0.11529	3.9567E-05	2.6099	0.00089573	2.7252	0.00093529	343.199141538501	24.141	0.37289	25.382	25.175	25.547	1.241					23	11	3	0	0	0	0.14606	1	10124	10124		0.50596	0	1	447880			42217	2009	20640	20729	48846	48846					0.10037662641775569
WRDLVRKVLA	10	Unmodified	_WRDLVRKVLA_					0	0	0		ENST00000582035.1_1_17:43530658-43531768:-|nuORF;ENST00000582201.5_1_17:62781409-62811241:-|nuORF;ENSG00000225190|ENST00000430334|PLEKHM1	ENST00000582035.1_1_17:43530658-43531768:-|nuORF	ENST00000582035.1_1_17:43530658-43531768:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	419.3164855837822	3	419.259302	1254.75608	0.80167	0.00033611	-0.24931	-0.00010452	0.55236	0.00023158	419.25933073927894	42.818	0.2139	42.818	42.666	42.88	0					11	6	2	0	0	0	0.12559	1	17893	17893		0.77653	0.27058	1	290960			42218	5289	20641	20730	48847	48847					0.138887532049921
WREIRKDKNKL	11	Unmodified	_WREIRKDKNKL_					0	0	0			REV__ENSG00000272636|ENST00000613549|DOC2B	REV__ENSG00000272636|ENST00000613549|DOC2B	MSMS	GG20161007_CRH_Patient100_W632_01	3	495.9615661501884	3	495.959803	1484.85758	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.622	1	88.714	88.214	89.214	1.0918								0	0	0	0.63775	1	36955	36955		0.094841	0	1		+		42219	12008	20642	20731	48848	48848					0.13454579836866287
WRERRKQLIR	10	Unmodified	_WRERRKQLIR_					0	0	0		ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	ENSG00000206530|ENST00000393845|CFAP44	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	360.2379638552666	4	360.971922	1439.85858	-2.0472	-0.00073899	-1.8715	-0.00067554	-3.9187	-0.0014145	361.22111537964963	15.09	0.15638	15.09	14.967	15.124	0					5	3	2	0	0	0	0.1256	1	6239	6239		0.62683	0.21856	1	371490			42220	5198	20643	20732	48849	48849					0.15624838996450308
WRERYVTL	8	Unmodified	_WRERYVTL_					0	0	0			REV__ENST00000431515.6_2_16:3029804-3030348:-|nuORF	REV__ENST00000431515.6_2_16:3029804-3030348:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8053466677666	2	561.806365	1121.59818	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.931	1	53.327	52.827	53.827	1.3966								0	0	0	1.0178	1	21743	21743		16.942	0.79319	1		+		42221	13028	20644	20733	48850	48850					0.04224253945744749
WRFIRVFIKII	11	Unmodified	_WRFIRVFIKII_					0	0	0		SLC27A4|p.T48I|1|0.22|ENSG00000167114|chr9:128343275-128343275|C/T|missense_variant	SLC27A4|p.T48I|1|0.22|ENSG00000167114|chr9:128343275-128343275|C/T|missense_variant	SLC27A4|p.T48I|1|0.22|ENSG00000167114|chr9:128343275-128343275|C/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1020385622978	4	373.489417	1489.92856	1.4695	0.00054883	0.00012293	4.5914E-08	1.4696	0.00054888	373.48936162099073	39.056	0.42498	39.365	39.213	39.638	0.30857					16	13	2	0	0	0	0.14606	1	16471	16471		0	0	1	483260			42222	15959	20645	20734	48851	48851					0.20319324612341916
WRGAFDYW	8	Unmodified	_WRGAFDYW_					0	0	0		nc|ENSG00000010803|Q96GD3-5|SCMH1;nc|ENSG00000010803|Q96GD3-4|SCMH1;nc|ENSG00000010803|Q96GD3-3|SCMH1;nc|ENSG00000010803|Q96GD3-2|SCMH1;nc|ENSG00000010803|Q96GD3|SCMH1;ENSG00000010803|ENST00000695335|SCMH1	nc|ENSG00000010803|Q96GD3-5|SCMH1	nc|ENSG00000010803|Q96GD3-5|SCMH1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	367.2698852419853	3	367.503131	1099.48756	1.7272	0.00063474	1.1749	0.00043178	2.9021	0.0010665	367.8366482663916	80.683	0.18407	82.379	82.303	82.487	1.6959					9	5	2	0	0	0	2.3239	1	33876	33876		0.45834	0	1	157260			42223	557	20646	20735	48852	48852					-0.05819966042486158
WRGLPGSD	8	Unmodified	_WRGLPGSD_					0	0	0		tr|A0A553SUP8|A0A553SUP8_NIACIDUF4976domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03890PE=4SV=1	tr|A0A553SUP8|A0A553SUP8_NIACIDUF4976domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03890PE=4SV=1	tr|A0A553SUP8|A0A553SUP8_NIACIDUF4976domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_03890PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	887.4406005740166	1	887.436992	886.429715	2.8067	0.0024908	1.1444	0.0010155	3.951	0.0035063	887.43777956391	107.46	0.16179	107.51	107.42	107.58	0.052452					18	7	3	0	0	0	0.89178	1	45991	45991		0.69038	0	1	23493000			42224	16701	20647	20736	48853	48853					-0.018042279679093554
WRHWRRETYPY	11	Unmodified	_WRHWRRETYPY_					0	0	0		nc|ENSG00000168907|Q68DD2-2|PLA2G4F;ENSG00000168907|ENST00000397272|PLA2G4F;nc|ENSG00000168907|Q68DD2-3|PLA2G4F	nc|ENSG00000168907|Q68DD2-2|PLA2G4F	nc|ENSG00000168907|Q68DD2-2|PLA2G4F	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2182494997978	3	550.607652	1648.80113	0.16163	8.8994E-05	0.13649	7.5152E-05	0.29812	0.00016415	550.6078606244064	15.309	0.15496	16.206	16.129	16.284	0.89664					7	4	2	0	0	0	0.14606	1	6361	6361		0	0	1	319110			42225	4058	20648	20737	48854	48854					0.002679520002402569
WRIPIKGG	8	Unmodified	_WRIPIKGG_					0	0	0			REV__ENSG00000080224|ENST00000389672|EPHA6;REV__ENSG00000142627|ENST00000358432|EPHA2	REV__ENSG00000080224|ENST00000389672|EPHA6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	308.9002258181572	3	309.523867	925.549771	0.18164	5.6222E-05	1.3912	0.00043062	1.5729	0.00048684	309.5242623976525	25.344	0.58393	25.596	25.305	25.889	0.25197					49	18	5	0	0	0	2.3239	1	10463	10463		0	0	1	14133000	+		42226	8805;10185	20649	20738	48855	48855					0.0840180509652555
WRKKWAQEPAL	11	Unmodified	_WRKKWAQEPAL_					0	0	0		nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;ENSG00000103599|ENST00000335894|IQCH	nc|ENSG00000103599|Q86VS3-4|IQCH	nc|ENSG00000103599|Q86VS3-4|IQCH	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	706.8969604372978	2	706.893503	1411.77245	2.5553	0.0018063	3.5384	0.0025013	6.0937	0.0043076	706.8966259553478	114.94	0.84232	115.09	114.71	115.55	0.14976					29	25	2	0	0	0	0.97491	1	49627	49627		5.2969	0	1	1098800			42227	1437	20650	20739	48856	48856					0.08303834371076846
WRKTLLLYYLW	11	Unmodified	_WRKTLLLYYLW_					0	0	0		ENST00000336139.8_1_11:123597023-123597197:-|nuORF	ENST00000336139.8_1_11:123597023-123597197:-|nuORF	ENST00000336139.8_1_11:123597023-123597197:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	778.1393920779228	2	777.945205	1553.87586	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.705	1	99.903	99.403	100.4	0.19767								0	0	0	0.63775	1	41971	41971		0.35063	0	1				42228	5915	20651	20740	48857	48857					0.12107321758935541
WRLGIVLFRP	10	Unmodified	_WRLGIVLFRP_					0	0	0			REV__ENST00000488252.6_1_19:19287863-19288136:-|nuORF	REV__ENST00000488252.6_1_19:19287863-19288136:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	419.3159057497978	3	419.592392	1255.75535	2.178	0.00091388	0.496	0.00020812	2.674	0.001122	419.5922097773731	80.335	0.62088	80.625	80.437	81.058	0.29056					29	19	2	0	0	0	0.12555	1	33674	33674		0.69767	0	1	801600	+		42229	13408	20652	20741	48858	48858					0.1376995855594032
WRLLPPAL	8	Unmodified	_WRLLPPAL_					0	0	0			REV__nc|ENSG00000132535|P78352-2|DLG4	REV__nc|ENSG00000132535|P78352-2|DLG4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	483.0506469607353	2	483.300188	964.585822	1.3545	0.00065464	3.6731	0.0017752	5.0277	0.0024299	483.3017781375407	99.78	0.089737	99.78	99.707	99.796	0					4	2	2	0	0	0	2.3239	1	41771	41771		0.79363	0	1	4813500	+		42230	14433	20653	20742	48859	48859					0.10211262273367083
WRLLPPAL	8	Unmodified	_WRLLPPAL_					0	0	0			REV__nc|ENSG00000132535|P78352-2|DLG4	REV__nc|ENSG00000132535|P78352-2|DLG4	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	483.300188	964.585822	3.5293	0.0017057	4.6478	0.0022463	8.1771	0.003952	483.30253159881283	99.751	0.12273	99.824	99.746	99.869	0.072716	0.021943	0.00011724	NaN	0.79363	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4271700	+		42231	14433	20653	20742							0.10211262273367083
WRLRQQPNRII	11	Unmodified	_WRLRQQPNRII_					0	0	0			REV__ENST00000519528.1_1_8:103299768-103305927:-|nuORF	REV__ENST00000519528.1_1_8:103299768-103305927:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	740.4355956912041	2	740.436401	1478.85825	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.51	1	103.57	103.07	104.07	0.059502								0	0	0	0.63775	1	43431	43431		0.26902	0.26902	1		+		42232	13615	20654	20743	48860	48860					0.1379741927660234
WRLSVLTLL	9	Unmodified	_WRLSVLTLL_					0	0	0		ENST00000366601.7_3_1:235577878-235577923:+|nuORF	ENST00000366601.7_3_1:235577878-235577923:+|nuORF	ENST00000366601.7_3_1:235577878-235577923:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	550.8531982302666	2	550.844959	1099.67537	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.959	1	97.243	96.743	97.743	0.28442								0	0	0	0.21022	1	40796	40796		25.399	9.5521	1				42233	6048	20655	20744	48861	48861					0.1295147216208079
WRLWLFIH	8	Unmodified	_WRLWLFIH_					0	0	0			REV__ENSG00000128519|ENST00000249284|TAS2R16	REV__ENSG00000128519|ENST00000249284|TAS2R16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2848083376884	3	390.89055	1169.64982	1.7736	0.00069329	-3.603	-0.0014084	-1.8294	-0.00071508	391.2236551363794	45.336	0.25423	45.664	45.529	45.783	0.3276					12	8	2	0	0	0	2.3239	1	19069	19069		0.45834	0	1	265630	+		42234	9729	20656	20745	48862	48862					0.07178042430314235
WRLWLFIH	8	Unmodified	_WRLWLFIH_					0	0	0			REV__ENSG00000128519|ENST00000249284|TAS2R16	REV__ENSG00000128519|ENST00000249284|TAS2R16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	391.2845336794853	3	390.89055	1169.64982	1.7693	0.00069159	-2.8612	-0.0011184	-1.0919	-0.00042682	390.8893238607827	45.668	0.54953	45.997	45.815	46.365	0.32899					31	17	2	0	0	0	2.3239	1	19305	19305		0.45834	0.18932	1	980730	+		42235	9729	20656	20745	48863	48863					0.07178042430314235
WRNRQKNKRR	10	Unmodified	_WRNRQKNKRR_					0	0	0		RRP8|p.C198S|1|0.11|ENSG00000132275|chr11:6601473-6601473|C/G|missense_variant;ENSG00000132275|ENST00000254605|RRP8	RRP8|p.C198S|1|0.11|ENSG00000132275|chr11:6601473-6601473|C/G|missense_variant	RRP8|p.C198S|1|0.11|ENSG00000132275|chr11:6601473-6601473|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	481.2842590212822	3	481.283503	1440.82868	3.4154	0.0016438	-0.46862	-0.00022554	2.9468	0.0014182	481.28287493317043	88.925	1.4158	89.149	88.809	90.224	0.22359					101	43	3	0	0	0	0.89803	1	37245	37245		0.15932	0.064481	1	2949300			42236	2521	20657	20746	48864	48864					0.12589900051079894
WRNTWPLRFRR	11	Unmodified	_WRNTWPLRFRR_					0	0	0		HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.9638549685478	3	529.963771	1586.86948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.518	1	38.518	38.018	39.018	0								0	0	0	0.63775	1	16146	16146		0.08335	0	1				42237	7635	20658	20747	48865	48865					0.0995224137070636
WRNTWPLRFRR	11	Unmodified	_WRNTWPLRFRR_					0	0	0		HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.9651977419853	3	529.963771	1586.86948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.646	1	38.646	38.146	39.146	0								0	0	0	0.63775	1	16200	16200		0.08335	0	1				42238	7635	20658	20747	48866	48866					0.0995224137070636
WRNTWPLRFRR	11	Unmodified	_WRNTWPLRFRR_					0	0	0		HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|147|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	529.9626342654228	3	529.963771	1586.86948	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.768	1	38.768	38.268	39.268	0								0	0	0	0.63775	1	16251	16251		0.08335	0	1				42239	7635	20658	20747	48867	48867					0.0995224137070636
WRPGHGAV	8	Unmodified	_WRPGHGAV_					0	0	0			REV__ENST00000400979.2_1_1:166244958-166245396:-|nuORF	REV__ENST00000400979.2_1_1:166244958-166245396:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	440.3579894900322	2	440.232836	878.45112	0.83972	0.00036967	0.89944	0.00039596	1.7392	0.00076564	440.2342680423167	107.87	0.14168	107.87	107.79	107.93	0					16	7	3	0	0	0	2.3239	1	46369	46369		0.79363	0	1	23208000	+		42240	12883	20659	20748	48868	48868					0.007032018514678384
WRPGHGAV	8	Unmodified	_WRPGHGAV_					0	0	0			REV__ENST00000400979.2_1_1:166244958-166245396:-|nuORF	REV__ENST00000400979.2_1_1:166244958-166245396:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	440.232836	878.45112	3.3508	0.0014751	0.53188	0.00023415	3.8827	0.0017093	440.23439854156004	107.77	0.11198	107.93	107.86	107.98	0.15795	0.029205	-0.00019996	NaN	0.79363	9	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	14517000	+		42241	12883	20659	20748							0.007032018514678384
WRPVGRGKTR	10	Unmodified	_WRPVGRGKTR_					0	0	0			REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	405.1796752810478	3	404.907262	1211.69996	2.5765	0.0010432	4.482	0.0018148	7.0585	0.002858	404.90847734837934	83.945	0.62609	84.206	84.067	84.693	0.26083					32	19	3	0	0	0	0.12559	1	35210	35210		0.77653	0.078866	1	900860	+		42242	13057	20660	20749	48869	48869					0.10257545088188635
WRPVGRGKTR	10	Unmodified	_WRPVGRGKTR_					0	0	0			REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	404.907262	1211.69996	2.0371	0.00082484	5.1339	0.0020788	7.171	0.0029036	404.90880973775523	83.216	0.31361	84.404	84.202	84.516	1.1879	0.12151	0.00043941	NaN	0.77653	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	862110	+		42243	13057	20660	20749							0.10257545088188635
WRPVGRGKTR	10	Unmodified	_WRPVGRGKTR_					0	0	0			REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	REV__ENST00000436881.2_1_9:139742659-139742749:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	404.907262	1211.69996	2.7568	0.0011162	4.8047	0.0019454	7.5615	0.0030617	404.90857189920735	82.568	0.33706	84.238	84.049	84.386	1.67	-0.044781	3.9447E-05	NaN	0.77653	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	895400	+		42244	13057	20660	20749							0.10257545088188635
WRQILHAE	8	Unmodified	_WRQILHAE_					0	0	0			REV__POLE|p.R721Efs*71|1|0.03|ENSG00000177084|chr12:132668369-132668369|C/-|frameshift_variant	REV__POLE|p.R721Efs*71|1|0.03|ENSG00000177084|chr12:132668369-132668369|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	351.1786071658134	3	351.526047	1051.55631	2.2052	0.00077519	3.2096	0.0011283	5.4148	0.0019035	351.52706513527255	84.809	0.41208	85.07	84.951	85.363	0.26083					20	12	3	0	0	0	2.3239	1	35538	35538		0.40072	0	1	412030	+		42245	11205	20661	20750	48870	48870					0.03259698257238597
WRQILHAE	8	Unmodified	_WRQILHAE_					0	0	0			REV__POLE|p.R721Efs*71|1|0.03|ENSG00000177084|chr12:132668369-132668369|C/-|frameshift_variant	REV__POLE|p.R721Efs*71|1|0.03|ENSG00000177084|chr12:132668369-132668369|C/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	351.526047	1051.55631	0.16509	5.8033E-05	1.6239	0.00057085	1.789	0.00062888	351.52682950275664	83.987	0.21999	85.175	84.987	85.207	1.1879	0.052768	-0.00088457	NaN	0.40072	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1375500	+		42246	11205	20661	20750							0.03259698257238597
WRQLSNHS	8	Unmodified	_WRQLSNHS_					0	0	0			REV__ENSG00000198056|ENST00000338193|PRIM1	REV__ENSG00000198056|ENST00000338193|PRIM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.1732971072197	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.985	1	48.315	47.815	48.815	0.33034								0	0	0	1.0178	1	20124	20124		0.45834	0	1		+		42247	11700	20662	20751	48871	48871					-0.012663492992942338
WRQLSNHS	8	Unmodified	_WRQLSNHS_					0	0	0			REV__ENSG00000198056|ENST00000338193|PRIM1	REV__ENSG00000198056|ENST00000338193|PRIM1	MSMS	GG20161007_CRH_Patient100_W632_01	3	343.1725952029228	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.286	1	47.661	47.161	48.161	1.3751								0	0	0	1.0178	1	19386	19386		0.45834	0	1		+		42248	11700	20662	20751	48872	48872					-0.012663492992942338
WRQLSNHS	8	Unmodified	_WRQLSNHS_					0	0	0			REV__ENSG00000198056|ENST00000338193|PRIM1	REV__ENSG00000198056|ENST00000338193|PRIM1	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1735412478447	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.83	1	47.801	47.301	48.301	1.9703								0	0	0	1.0178	1	19198	19198		0.45834	0	1		+		42249	11700	20662	20751	48873	48873					-0.012663492992942338
WRRFRFQFQCE	11	Unmodified	_WRRFRFQFQCE_					0	0	0			REV__ENSG00000115596|ENST00000233948|WNT6	REV__ENSG00000115596|ENST00000233948|WNT6	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	402.1804687380791	4	401.449123	1601.76739	1.8859	0.00075709	0.59606	0.00023929	2.4819	0.00099638	401.449617804374	42.141	0.4126	42.462	42.285	42.697	0.32058					28	13	3	0	0	0	0.14606	1	17718	17718		0	0	1	1965800	+		42250	9445	20663	20752	48874	48874					-0.009427927631804778
WRRFRFQFQCE	11	Unmodified	_WRRFRFQFQCE_					0	0	0			REV__ENSG00000115596|ENST00000233948|WNT6	REV__ENSG00000115596|ENST00000233948|WNT6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		4	401.449123	1601.76739	0.29139	0.00011698	2.9903	0.0012004	3.2817	0.0013174	401.70064680608795	42.643	0.33992	42.643	42.479	42.819	0	0.090594	0.0023626	NaN	0	24	10	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1859600	+		42251	9445	20663	20752							-0.009427927631804778
WRRKEMKK	8	Unmodified	_WRRKEMKK_					0	0	0		ENSG00000138600|ENST00000261854|SPPL2A	ENSG00000138600|ENST00000261854|SPPL2A	ENSG00000138600|ENST00000261854|SPPL2A	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	388.1277038455009	3	387.893965	1160.66007	1.2354	0.00047922	3.5744	0.0013865	4.8098	0.0018657	387.8948027486274	70.054	0.30647	70.376	70.224	70.53	0.32224					13	9	2	0	0	0	2.3239	1	29267	29267		0.40072	0	1	518410			42252	2837	20664	20753	48875	48875					0.08616282093225891
WRRKRRWKRDY	11	Unmodified	_WRRKRRWKRDY_					0	0	0			REV__ENST00000553345.5_1_20:31020694-31021097:+|nuORF	REV__ENST00000553345.5_1_20:31020694-31021097:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	853.3428222537041	2	853.484748	1704.95494	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.205	1	17.031	16.531	17.531	0.82643								0	0	0	0.63775	1	6737	6737		0	0	1		+		42253	13844	20665	20754	48876	48876					0.13066406556390575
WRRLRLGLLVA	11	Unmodified	_WRRLRLGLLVA_					0	0	0			REV__nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8	REV__nc|ENSG00000253767|Q9Y5G5-2|PCDHGA8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	338.9706909060478	4	338.971391	1351.85646	-1.8818	-0.00063789	-0.46043	-0.00015607	-2.3423	-0.00079396	338.97134967247854	33.714	0.8035	33.714	33.328	34.131	0					99	25	5	0	0	0	1.0365	1	14072	14072		1.2148	0	1	4120500	+		42254	11960	20666	20755	48877	48877					0.19460410258625416
WRRRKEKLLK	10	Unmodified	_WRRRKEKLLK_					0	0	0		nc|ENSG00000142459|Q96CN4|EVI5L;ENSG00000142459|ENST00000538904|EVI5L	nc|ENSG00000142459|Q96CN4|EVI5L	nc|ENSG00000142459|Q96CN4|EVI5L	MSMS	GG20161007_CRH_Patient100_A02_02	2	706.9506713747978	2	706.951687	1411.88882	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.127	1	41.443	40.943	41.943	0.31683								0	0	0	0.6624	1	17280	17280		0.40072	0	1				42255	2995	20667	20756	48878	48878					0.199351976616299
WRRRRPGRR	9	Unmodified	_WRRRRPGRR_					0	0	0		ENSG00000110665|ENST00000381153|C11orf21	ENSG00000110665|ENST00000381153|C11orf21	ENSG00000110665|ENST00000381153|C11orf21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	648.3921996951103	2	648.392662	1294.77077	1.8988	0.0012312	-2.4928	-0.0016163	-0.59394	-0.00038511	648.3908816592356	95.935	0.26292	95.935	95.773	96.035	0					25	8	4	0	0	0	0.85019	2	40087	40087;40139		0.52476	0	1	15003000			42256	1710	20668	20757	48879;48880	48879					0.13517682916335616
WRRRRTQRR	9	Unmodified	_WRRRRTQRR_					0	0	0		ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9090453982353	2	685.908676	1369.8028	2.4567	0.0016851	-0.1037	-7.113E-05	2.353	0.001614	685.9081370459064	83.221	1.4749	83.221	82.277	83.752	0					104	47	3	0	0	0	0.85019	1	34744	34744		0.52476	0.066424	1	2273600			42257	6587	20669	20758	48881	48881					0.1326905059947876
WRRRRTQRR	9	Unmodified	_WRRRRTQRR_					0	0	0		ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	ENST00000447310.5_1_19:58067715-58071064:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	685.9100829958916	2	685.908676	1369.8028	2.7523	0.0018878	-0.21976	-0.00015073	2.5325	0.0017371	685.9081955805191	85.292	2.0985	85.292	84.622	86.72	0					148	67	4	0	0	0	0.83753	1	35394	35394		1.8442	0.6509	1	4137900			42258	6587	20669	20758	48882	48882					0.1326905059947876
WRRWNRFCRRK	11	Unmodified	_WRRWNRFCRRK_					0	0	0		ERC1-CACNA1C|37|fusion;ERC1-CACNA1C|27|fusion;ERC1-CACNA1C|32|fusion;ERC1-CACNA1C|36|fusion;ERC1-CACNA1C|35|fusion;ERC1-CACNA1C|25|fusion;ERC1-CACNA1C|39|fusion;ERC1-CACNA1C|33|fusion;ERC1-CACNA1C|43|fusion;ERC1-CACNA1C|44|fusion;ERC1-CACNA1C|38|fusion;ERC1-CACNA1C|45|fusion;ERC1-CACNA1C|31|fusion;ERC1-CACNA1C|30|fusion;ERC1-CACNA1C|34|fusion;ERC1-CACNA1C|40|fusion;ERC1-CACNA1C|28|fusion;ERC1-CACNA1C|24|fusion;ERC1-CACNA1C|41|fusion;ERC1-CACNA1C|29|fusion;ERC1-CACNA1C|26|fusion;ERC1-CACNA1C|46|fusion;ERC1-CACNA1C|42|fusion;ERC1-CACNA1C|21|fusion;ERC1-CACNA1C|19|fusion;ERC1-CACNA1C|6|fusion;ERC1-CACNA1C|3|fusion;ERC1-CACNA1C|4|fusion;ERC1-CACNA1C|1|fusion;ERC1-CACNA1C|13|fusion;ERC1-CACNA1C|5|fusion;ERC1-CACNA1C|12|fusion;ERC1-CACNA1C|10|fusion;ERC1-CACNA1C|15|fusion;ERC1-CACNA1C|16|fusion;ERC1-CACNA1C|2|fusion;ERC1-CACNA1C|14|fusion;ERC1-CACNA1C|20|fusion;ERC1-CACNA1C|11|fusion;ERC1-CACNA1C|8|fusion;ERC1-CACNA1C|9|fusion;ERC1-CACNA1C|7|fusion;ERC1-CACNA1C|17|fusion;ERC1-CACNA1C|22|fusion;ERC1-CACNA1C|18|fusion;ERC1-CACNA1C|23|fusion;nc|ENSG00000151067|Q13936-27|CACNA1C;nc|ENSG00000151067|Q13936-37|CACNA1C;nc|ENSG00000151067|Q13936-13|CACNA1C;nc|ENSG00000151067|Q13936-32|CACNA1C;nc|ENSG00000151067|Q13936-25|CACNA1C;nc|ENSG00000151067|Q13936-29|CACNA1C;nc|ENSG00000151067|Q13936-15|CACNA1C;nc|ENSG00000151067|Q13936-16|CACNA1C;nc|ENSG00000151067|Q13936-26|CACNA1C;nc|ENSG00000151067|Q13936-20|CACNA1C;nc|ENSG00000151067|Q13936-30|CACNA1C;nc|ENSG00000151067|Q13936-23|CACNA1C;nc|ENSG00000151067|Q13936-22|CACNA1C;nc|ENSG00000151067|Q13936-21|CACNA1C;ENSG00000151067|ENST00000399655|CACNA1C;nc|ENSG00000151067|Q13936-35|CACNA1C;nc|ENSG00000151067|Q13936-19|CACNA1C;nc|ENSG00000151067|Q13936-17|CACNA1C;nc|ENSG00000151067|Q13936-2|CACNA1C;nc|ENSG00000151067|Q13936-24|CACNA1C;nc|ENSG00000151067|Q13936-5|CACNA1C;nc|ENSG00000151067|Q13936-31|CACNA1C;nc|ENSG00000151067|Q13936-10|CACNA1C;nc|ENSG00000151067|Q13936-9|CACNA1C;nc|ENSG00000151067|Q13936-3|CACNA1C;nc|ENSG00000151067|Q13936|CACNA1C;nc|ENSG00000151067|Q13936-8|CACNA1C;nc|ENSG00000151067|Q13936-4|CACNA1C;nc|ENSG00000151067|Q13936-7|CACNA1C;nc|ENSG00000151067|Q13936-6|CACNA1C;nc|ENSG00000151067|Q13936-11|CACNA1C;nc|ENSG00000151067|Q13936-18|CACNA1C;nc|ENSG00000151067|Q13936-14|CACNA1C;nc|ENSG00000151067|Q13936-33|CACNA1C;nc|ENSG00000151067|Q13936-36|CACNA1C;nc|ENSG00000151067|Q13936-28|CACNA1C;nc|ENSG00000151067|Q13936-34|CACNA1C;CACNA1C|p.S1498Afs*17|1|0.18|ENSG00000151067|chr12:2664940-2664940|A/-|frameshift_variant;CACNA1C|p.I1373Sfs*65|1|0.06|ENSG00000151067|chr12:2651667-2651668|-/G|frameshift_variant;CACNA1C|p.V1586Wfs*9|1|0.1|ENSG00000151067|chr12:2666770-2666770|C/-|frameshift_variant	ERC1-CACNA1C|37|fusion	ERC1-CACNA1C|37|fusion	MSMS	GG20161007_CRH_Patient100_W632_02	4	832.4525024294853	2	832.452394	1662.89023	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.566	1	97.822	97.322	98.322	0.25636								0	0	0	0.63775	1	41044	41044		0	0	1				42259	7578	20670	20759	48883	48883					0.08530508478725096
WRRWNRFNRRR	11	Unmodified	_WRRWNRFNRRR_					0	0	0		nc|ENSG00000157388|Q01668-4|CACNA1D;CACNA1D|p.Q1955Pfs*19|1|0.09|ENSG00000157388|chr3:53808762-53808763|-/CTCCTCCTTCAGAGAGTGTTGTGCAG|frameshift_variant;nc|ENSG00000157388|Q01668-3|CACNA1D;ENSG00000157388|ENST00000350061|CACNA1D;nc|ENSG00000157388|Q01668-2|CACNA1D	nc|ENSG00000157388|Q01668-4|CACNA1D	nc|ENSG00000157388|Q01668-4|CACNA1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	852.4088622927666	2	851.972339	1701.93013	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.274	1	98.531	98.031	99.031	0.25636								0	0	0	0.63775	1	41353	41353		0	0	1				42260	111	20671	20760	48884	48884					0.10723771473658417
WRRWRIRDPTH	11	Unmodified	_WRRWRIRDPTH_					0	0	0			REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	790.4296752810478	2	789.929274	1577.844	1.8156	0.0014342	-4.197	-0.0033154	-2.3815	-0.0018812	789.925729445207	66.116	0.93285	66.116	65.579	66.512	0					43	28	2	0	0	0	0.94496	2	27567	27515;27567		7.1017	5.7722	1	801110	+		42261	12168	20672	20761	48885;48886	48886					0.07818766848299674
WRRWRIRDPTH	11	Unmodified	_WRRWRIRDPTH_					0	0	0			REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	789.929274	1577.844	1.8156	0.0014342	-4.197	-0.0033154	-2.3815	-0.0018812	789.925729445207	66.116	0.93285	66.116	65.579	66.512	0	0.21714	0.0011955	NaN	7.1017	43	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	801110	+		42262	12168	20672	20761							0.07818766848299674
WRRWRIRDPTH	11	Unmodified	_WRRWRIRDPTH_					0	0	0			REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	789.929274	1577.844	2.4964	0.0019719	-4.5538	-0.0035972	-2.0574	-0.0016252	789.925941218381	64.385	0.90493	65.792	65.174	66.079	1.4071	-0.10696	0.00063193	NaN	7.1017	48	28	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	968560	+		42263	12168	20672	20761							0.07818766848299674
WRRWRIRDPTH	11	Unmodified	_WRRWRIRDPTH_					0	0	0			REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	REV__ENST00000256858.10_2_18:59854532-59854781:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	789.929274	1577.844	2.4885	0.0019658	-5.7099	-0.0045104	-3.2213	-0.0025446	789.9250159158229	63.849	0.84583	65.777	65.231	66.077	1.928	-0.12218	-0.0011945	NaN	7.1017	49	26	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836970	+		42264	12168	20672	20761							0.07818766848299674
WRSHCVGG	8	Unmodified	_WRSHCVGG_					0	0	0			REV__nc|ENSG00000134376|P82279-4|CRB1	REV__nc|ENSG00000134376|P82279-4|CRB1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1414977908134	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.95859	1	1.707	1.207	2.207	0.7484								0	0	0	1.0178	1	396	396		0.45834	0	1		+		42265	9905	20673	20762	48887	48887					-0.05173034779932095
WRSHCVGG	8	Unmodified	_WRSHCVGG_					0	0	0			REV__nc|ENSG00000134376|P82279-4|CRB1	REV__nc|ENSG00000134376|P82279-4|CRB1	MSMS	GG20161007_CRH_Patient100_W632_02	4	301.1416503787041	3	301.141428	900.402455	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5026	1	3.251	2.751	3.751	0.7484								0	0	0	1.0178	1	1039	1039		0.45834	0	1		+		42266	9905	20673	20762	48888	48888					-0.05173034779932095
WRSLHNTN	8	Unmodified	_WRSLHNTN_					0	0	0			REV__ENST00000426620.5_1_3:38234779-38271948:+|nuORF	REV__ENST00000426620.5_1_3:38234779-38271948:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.1735107302666	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	59.991	1	60.319	59.819	60.819	0.32809								0	0	0	1.0178	1	25141	25141		0.45834	0	1		+		42267	13000	20674	20763	48889	48889					-0.012663492992714964
WRSLHNTN	8	Unmodified	_WRSLHNTN_					0	0	0			REV__ENST00000426620.5_1_3:38234779-38271948:+|nuORF	REV__ENST00000426620.5_1_3:38234779-38271948:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.1721374392509	3	343.173785	1026.49953	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.05	1	63.38	62.88	63.88	0.32974								0	0	0	1.0178	1	26415	26415		0.45834	0	1		+		42268	13000	20674	20763	48890	48890					-0.012663492992714964
WRSSDPHL	8	Unmodified	_WRSSDPHL_					0	0	0			REV__GABRG3|p.S452Vfs*6|1|0.11|ENSG00000182256|chr15:27532829-27532830|-/A|frameshift_variant	REV__GABRG3|p.S452Vfs*6|1|0.11|ENSG00000182256|chr15:27532829-27532830|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	333.1669799685478	3	333.166519	996.477728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.47	1	103.65	103.15	104.15	0.18066								0	0	0	1.0178	1	43580	43580		0.45834	0	1		+		42269	11344	20675	20764	48891	48891					-0.02065154047852502
WRWRKRWRL	9	Unmodified	_WRWRKRWRL_					0	0	0			REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	REV__ENST00000507209.5_1_4:187125362-187125452:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	481.2825805544853	3	481.617935	1441.83197	4.5261	0.0021798	0.41499	0.00019987	4.9411	0.0023797	481.61803328393484	88.046	1.2971	89.493	88.624	89.921	1.4467					61	40	2	0	0	0	0.11938	1	37213	37213		0.26902	0.17418	1	2536400	+		42270	13545	20676	20765	48892	48892					0.12873194895769302
WRWRNNRWVYY	11	Unmodified	_WRWRNNRWVYY_					0	0	0		tr|A0A553SIR6|A0A553SIR6_NIACITransporterOS=NialliacirculansOX=1397GN=CEQ21_15350PE=4SV=1	tr|A0A553SIR6|A0A553SIR6_NIACITransporterOS=NialliacirculansOX=1397GN=CEQ21_15350PE=4SV=1	tr|A0A553SIR6|A0A553SIR6_NIACITransporterOS=NialliacirculansOX=1397GN=CEQ21_15350PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	1699.106249988079	1	1698.84004	1697.83276	0.84885	0.0014421	1.1186	0.0019004	1.9675	0.0033424	1698.841112784832	25.898	0.15438	27.157	27.049	27.204	1.2594					6	4	2	0	0	0	0.14606	1	10819	10819		0	0	1	1112000			42271	16215	20677	20766	48893	48893					0.011759447541635382
WRWTQGPP	8	Unmodified	_WRWTQGPP_					0	0	0		ENST00000314289.12_2_4:2515602-2515950:+|nuORF	ENST00000314289.12_2_4:2515602-2515950:+|nuORF	ENST00000314289.12_2_4:2515602-2515950:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1743041872978	3	343.175126	1026.50355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.228	1	73.228	72.728	73.728	0								0	0	0	1.0178	1	30487	30487		0.45834	0	1				42272	5820	20678	20767	48894	48894					-0.008642598055985218
WRWTQGPP	8	Unmodified	_WRWTQGPP_					0	0	0		ENST00000314289.12_2_4:2515602-2515950:+|nuORF	ENST00000314289.12_2_4:2515602-2515950:+|nuORF	ENST00000314289.12_2_4:2515602-2515950:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1756469607353	3	343.175126	1026.50355	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.353	1	73.353	72.853	73.853	0								0	0	0	1.0178	1	30540	30540		0.45834	0	1				42273	5820	20678	20767	48895	48895					-0.008642598055985218
WSAGSANA	8	Unmodified	_WSAGSANA_					0	0	0			REV__ENSG00000184160|ENST00000330055|ADRA2C	REV__ENSG00000184160|ENST00000330055|ADRA2C	MSMS	GG20161007_CRH_Patient100_A02_02	2	382.1717101931572	2	382.17211	762.329667	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.82	1	110.86	110.36	111.36	0.047043								0	0	0	1.0178	1	47797	47797		0	0	1		+		42274	11413	20679	20768	48896	48896					-0.06100465301733493
WSARAIIPRQR	11	Unmodified	_WSARAIIPRQR_					0	0	0		PGBD4|p.M80I|1|0.06|ENSG00000182405|chr15:34102771-34102771|G/A|missense_variant	PGBD4|p.M80I|1|0.06|ENSG00000182405|chr15:34102771-34102771|G/A|missense_variant	PGBD4|p.M80I|1|0.06|ENSG00000182405|chr15:34102771-34102771|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9342834353447	3	451.933588	1352.77894	2.616	0.0011823	-1.0299	-0.00046544	1.5861	0.00071682	451.93325901350767	86.475	0.35813	86.475	86.339	86.697	0					17	11	2	0	0	0	1.0282	1	36046	36046		0.84494	0	1	1241100			42275	8050	20680	20769	48897	48897					0.11665772322430712
WSASTSRT	8	Unmodified	_WSASTSRT_					0	0	0			REV__ENST00000597661.5_1_19:19206933-19217139:+|nuORF	REV__ENST00000597661.5_1_19:19206933-19217139:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	448.2198364138603	2	448.217049	894.419545	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.64	1	104.8	104.3	105.3	0.16055								0	0	0	1.0178	1	44384	44384		2.5775	0	1		+		42276	14103	20681	20770	48898	48898					-0.031888356931403905
WSCWRTCWERS	11	Unmodified	_WSCWRTCWERS_					0	0	0		ENST00000473649.1_1_7:142965244-142965916:+|nuORF	ENST00000473649.1_1_7:142965244-142965916:+|nuORF	ENST00000473649.1_1_7:142965244-142965916:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	499.8870117068291	3	500.548417	1498.62342	-0.0068966	-3.4521E-06	1.5297	0.00076568	1.5228	0.00076223	500.54982002151536	15.208	0.35302	16.105	15.869	16.222	0.89664					18	11	3	0	0	0	0.14606	1	6215	6215		0.36667	0.20735	1	993510			42277	6766	20682	20771	48899	48899					-0.1059438258564569
WSFQRILEFQE	11	Unmodified	_WSFQRILEFQE_					0	0	0		chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	741.8723022341728	2	741.872434	1481.73031	0.024243	1.7985E-05	-1.7684	-0.0013119	-1.7442	-0.001294	741.8713796466957	51.437	0.47959	52.831	52.468	52.948	1.3938					38	15	3	0	0	0	0.62024	1	21526	21526		20.581	6.9661	1	3545100			42278	263	20683	20772	48900	48900					0.0087181417204647
WSFQRILEFQE	11	Unmodified	_WSFQRILEFQE_					0	0	0		chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	741.872434	1481.73031	1.6769	0.001244	-1.5493	-0.0011494	0.12755	9.4629E-05	741.8708725911673	52.468	0.30383	52.794	52.621	52.924	0.32553	0.02063	-9.1747E-05	NaN	20.581	12	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	780920			42279	263	20683	20772							0.0087181417204647
WSFQRILEFQE	11	Unmodified	_WSFQRILEFQE_					0	0	0		chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	chr4:1090838-1091465|232|13.76|0.71|4.28|-|0|RNF212,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	741.872434	1481.73031	-0.38371	-0.00028466	-1.2117	-0.00089895	-1.5954	-0.0011836	741.8713556952902	50.72	0.51302	52.695	52.454	52.967	1.9753	-0.078385	0.00040911	NaN	20.581	35	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2951200			42280	263	20683	20772							0.0087181417204647
WSKAKLHL	8	Unmodified	_WSKAKLHL_					0	0	0			REV__nc|ENSG00000157796|Q8NEZ3-2|WDR19	REV__nc|ENSG00000157796|Q8NEZ3-2|WDR19	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1999389529228	3	328.199272	981.575986	0.66165	0.00021715	0.53961	0.0001771	1.2013	0.00039425	328.19942166780146	32.83	0.34619	33.124	32.959	33.305	0.29431					52	12	5	0	0	0	0.88663	1	13733	13733		3.2813	0	1	80397000	+		42281	14468	20684	20773	48901	48901					0.08446074267999393
WSKCSLCMW	9	Unmodified	_WSKCSLCMW_					0	0	0		L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|187|1|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|187|1|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|187|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	381.8601257205009	3	381.830986	1142.47113	1.8844	0.00071953	2.379	0.00090836	4.2634	0.0016279	381.83199889532074	44.708	0.18693	46.073	45.993	46.18	1.3653					7	5	2	0	0	0	0.7849	1	18762	18762		2.2828	0	1	818650			42282	7689	20685	20774	48902	48902					-0.09440874586766768
WSLPGLGQDT	10	Unmodified	_WSLPGLGQDT_					0	0	0		ENSG00000163701|ENST00000383814|IL17RE;nc|ENSG00000163701|Q8NFR9-3|IL17RE;nc|ENSG00000163701|Q8NFR9-2|IL17RE;ENST00000480244.1_1_3:9953152-9953299:+|nuORF;nc|ENSG00000163701|Q8NFR9-4|IL17RE;ENST00000383815.7_1_3:9944714-9956386:+|nuORF	ENSG00000163701|ENST00000383814|IL17RE	ENSG00000163701|ENST00000383814|IL17RE	MSMS	GG20161007_CRH_Patient100_W632_02	4	537.2691528201103	2	537.266739	1072.51892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.39	1	102.57	102.07	103.07	0.18066								0	0	0	0.66087	1	43063	43063		2.9952	0	1				42283	3715	20686	20775	48903	48903					-0.014434377990482972
WSPRHKHSNAA	11	Unmodified	_WSPRHKHSNAA_					0	0	0			REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878051638603	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.37	1	110.53	110.03	111.03	0.16133								0	0	0	0.63775	1	47938	47938		0	0	1		+		42284	13750	20687	20776	48904	48904					0.0045177394920301595
WSPRHKHSNAA	11	Unmodified	_WSPRHKHSNAA_					0	0	0			REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879882693291	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.47	1	110.63	110.13	111.13	0.16133								0	0	0	0.63775	1	47978	47978		0	0	1		+		42285	13750	20687	20776	48905	48905					0.0045177394920301595
WSPRHKHSNAA	11	Unmodified	_WSPRHKHSNAA_					0	0	0			REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	REV__ENST00000536170.1_1_11:73054124-73064192:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8880798220634	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.22	1	111.38	110.88	111.88	0.16445								0	0	0	0.63775	1	48272	48272		0	0	1		+		42286	13750	20687	20776	48906	48906					0.0045177394920301595
WSSKIRRRRER	11	Unmodified	_WSSKIRRRRER_					0	0	0			REV__chr19:54160371-54160467|113|22.29|0.28|6.3|-|1|None,TMC4|1	REV__chr19:54160371-54160467|113|22.29|0.28|6.3|-|1|None,TMC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.9693786501884	3	510.634313	1528.88111	2.7834	0.0014213	-0.1082	-5.525E-05	2.6752	0.001366	510.6344476315024	90.189	1.0111	90.398	89.888	90.9	0.20904					60	31	3	0	0	0	1.0405	1	37746	37746		0	0	1	1120300	+		42287	8292	20688	20777	48907	48907					0.13782438394036944
WSSKIRRRRER	11	Unmodified	_WSSKIRRRRER_					0	0	0			REV__chr19:54160371-54160467|113|22.29|0.28|6.3|-|1|None,TMC4|1	REV__chr19:54160371-54160467|113|22.29|0.28|6.3|-|1|None,TMC4|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	510.6348449587822	3	510.634313	1528.88111	2.8119	0.0014358	-0.81435	-0.00041584	1.9975	0.00102	510.63394501595786	92.129	1.7831	92.32	91.786	93.569	0.19042					106	55	3	0	0	0	1.0402	1	38422	38422		0.073264	0.073264	1	1850100	+		42288	8292	20688	20777	48908	48908					0.13782438394036944
WSTGYAETL	9	Unmodified	_WSTGYAETL_					0	0	0		ENST00000486709.1_1_1:113257111-113257923:-|nuORF	ENST00000486709.1_1_1:113257111-113257923:-|nuORF	ENST00000486709.1_1_1:113257111-113257923:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2396728396416	2	514.24019	1026.46583	2.2569	0.0011606	-2.7198	-0.0013986	-0.46292	-0.00023805	514.2388862211869	84.659	0.59084	85.818	85.527	86.118	1.159					87	18	8	0	0	0	0.46905	1	35572	35572		16.942	3.0362	1	27169000			42289	6867	20689	20778	48909	48909					-0.046348155816986036
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_01	1	360.3288757205009	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6053	1	7.6053	7.1053	8.1053	0								0	0	0	1.0178	1	3126	3126		0.45834	0	1		+		42290	9078	20690	20779	48910	48910					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2013122439384	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.21662	1	0.37506	-0.12494	0.87506	0.15844								0	0	0	1.0178	1	89	89		0.45834	0	1		+		42291	9078	20690	20779	48911	48911					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.34444	1	0.50288	0.0028843	1.0029	0.15844								0	0	0	1.0178	1	142	142		0.45834	0	1		+		42292	9078	20690	20779	48912	48912					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2015869021416	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.49297	1	0.65141	0.15141	1.1514	0.15844								0	0	0	1.0178	1	202	202		0.45834	0	1		+		42293	9078	20690	20779	48913	48913					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.6109	1	0.76934	0.26934	1.2693	0.15844								0	0	0	1.0178	1	251	251		0.45834	0	1		+		42294	9078	20690	20779	48914	48914					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2022582888603	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.0077	1	1.1548	0.65477	1.6548	0.14703								0	0	0	1.0178	1	415	415		0.45834	0	1		+		42295	9078	20690	20779	48915	48915					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1691	1	1.3162	0.81615	1.8162	0.14703								0	0	0	1.0178	1	482	482		0.45834	0	1		+		42296	9078	20690	20779	48916	48916					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2010986208916	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3075	1	1.4545	0.95449	1.9545	0.14703								0	0	0	1.0178	1	539	539		0.45834	0	1		+		42297	9078	20690	20779	48917	48917					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2013732790947	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7868	1	1.9338	1.4338	2.4338	0.14703								0	0	0	1.0178	1	736	736		0.45834	0	1		+		42298	9078	20690	20779	48918	48918					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2024108767509	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.056	1	2.1785	1.6785	2.6785	0.12256								0	0	0	1.0178	1	845	845		0.45834	0	1		+		42299	9078	20690	20779	48919	48919					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2012512087822	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1448	1	2.2673	1.7673	2.7673	0.12256								0	0	0	1.0178	1	882	882		0.45834	0	1		+		42300	9078	20690	20779	48920	48920					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2020751833916	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.2917	1	2.4142	1.9142	2.9142	0.12256								0	0	0	1.0178	1	944	944		0.45834	0	1		+		42301	9078	20690	20779	48921	48921					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2015869021416	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.5505	1	2.6731	2.1731	3.1731	0.12256								0	0	0	1.0178	1	1051	1051		0.45834	0	1		+		42302	9078	20690	20779	48922	48922					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2012512087822	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.6874	1	2.8099	2.3099	3.3099	0.12256								0	0	0	1.0178	1	1108	1108		0.45834	0	1		+		42303	9078	20690	20779	48923	48923					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2008544802666	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8113	1	2.9339	2.4339	3.4339	0.12256								0	0	0	1.0178	1	1160	1160		0.45834	0	1		+		42304	9078	20690	20779	48924	48924					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2010986208916	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.9169	1	3.0394	2.5394	3.5394	0.12256								0	0	0	1.0178	1	1204	1204		0.45834	0	1		+		42305	9078	20690	20779	48925	48925					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2012512087822	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2083	1	3.3103	2.8103	3.8103	0.10199								0	0	0	1.0178	1	1324	1324		0.45834	0	1		+		42306	9078	20690	20779	48926	48926					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2015563845634	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4397	1	3.5417	3.0417	4.0417	0.10199								0	0	0	1.0178	1	1420	1420		0.45834	0	1		+		42307	9078	20690	20779	48927	48927					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2011901736259	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6518	1	3.7538	3.2538	4.2538	0.10199								0	0	0	1.0178	1	1507	1507		0.45834	0	1		+		42308	9078	20690	20779	48928	48928					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2008544802666	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8786	1	3.9806	3.4806	4.4806	0.10199								0	0	0	1.0178	1	1601	1601		0.45834	0	1		+		42309	9078	20690	20779	48929	48929					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2013732790947	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1365	1	4.2385	3.7385	4.7385	0.10199								0	0	0	1.0178	1	1708	1708		0.45834	0	1		+		42310	9078	20690	20779	48930	48930					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2015258669853	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6682	1	4.7562	4.2562	5.2562	0.08803								0	0	0	1.0178	1	1929	1929		0.45834	0	1		+		42311	9078	20690	20779	48931	48931					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2008544802666	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.8681	1	4.9562	4.4562	5.4562	0.08803								0	0	0	1.0178	1	2011	2011		0.45834	0	1		+		42312	9078	20690	20779	48932	48932					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2013122439384	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1358	1	5.2238	4.7238	5.7238	0.08803								0	0	0	1.0178	1	2122	2122		0.45834	0	1		+		42313	9078	20690	20779	48933	48933					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2011596560478	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.411	1	5.499	4.999	5.999	0.08803								0	0	0	1.0178	1	2235	2235		0.45834	0	1		+		42314	9078	20690	20779	48934	48934					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2015258669853	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.10973	1	0.77712	0.27712	1.2771	0.66738								0	0	0	1.0178	1	44	44		0.45834	0	1		+		42315	9078	20690	20779	48935	48935					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2017394900322	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.30881	1	0.97619	0.47619	1.4762	0.66738								0	0	0	1.0178	1	126	126		0.45834	0	1		+		42316	9078	20690	20779	48936	48936					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2012206912041	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.40241	1	1.0698	0.56979	1.5698	0.66738								0	0	0	1.0178	1	164	164		0.45834	0	1		+		42317	9078	20690	20779	48937	48937					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2020751833916	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.81109	1	1.4644	0.96441	1.9644	0.65331								0	0	0	1.0178	1	332	332		0.45834	0	1		+		42318	9078	20690	20779	48938	48938					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.97496	1	1.6283	1.1283	2.1283	0.65331								0	0	0	1.0178	1	399	399		0.45834	0	1		+		42319	9078	20690	20779	48939	48939					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2016784548759	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2123	1	1.8656	1.3656	2.3656	0.65331								0	0	0	1.0178	1	496	496		0.45834	0	1		+		42320	9078	20690	20779	48940	48940					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2016174197197	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3205	1	1.9738	1.4738	2.4738	0.65331								0	0	0	1.0178	1	541	541		0.45834	0	1		+		42321	9078	20690	20779	48941	48941					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2018005251884	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.521	1	2.1744	1.6744	2.6744	0.65331								0	0	0	1.0178	1	623	623		0.45834	0	1		+		42322	9078	20690	20779	48942	48942					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2013427615166	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7451	1	2.3984	1.8984	2.8984	0.65331								0	0	0	1.0178	1	716	716		0.45834	0	1		+		42323	9078	20690	20779	48943	48943					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2015563845634	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8465	1	2.4998	1.9998	2.9998	0.65331								0	0	0	1.0178	1	758	758		0.45834	0	1		+		42324	9078	20690	20779	48944	48944					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2017394900322	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1319	1	2.7661	2.2661	3.2661	0.63417								0	0	0	1.0178	1	875	875		0.45834	0	1		+		42325	9078	20690	20779	48945	48945					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2017700076103	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.286	1	2.9201	2.4201	3.4201	0.63417								0	0	0	1.0178	1	939	939		0.45834	0	1		+		42326	9078	20690	20779	48946	48946					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2012817263603	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4254	1	3.0596	2.5596	3.5596	0.63417								0	0	0	1.0178	1	998	998		0.45834	0	1		+		42327	9078	20690	20779	48947	48947					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.573	1	3.2072	2.7072	3.7072	0.63417								0	0	0	1.0178	1	1059	1059		0.45834	0	1		+		42328	9078	20690	20779	48948	48948					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2021667361259	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.8032	1	3.4374	2.9374	3.9374	0.63417								0	0	0	1.0178	1	1155	1155		0.45834	0	1		+		42329	9078	20690	20779	48949	48949					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2019836306572	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.1533	1	3.7769	3.2769	4.2769	0.62362								0	0	0	1.0178	1	1301	1301		0.45834	0	1		+		42330	9078	20690	20779	48950	48950					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.33816	1	1.0739	0.57395	1.5739	0.73579								0	0	0	1.0178	1	139	139		0.45834	0	1		+		42331	9078	20690	20779	48951	48951					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2019225955009	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.56386	1	1.2997	0.79965	1.7997	0.73579								0	0	0	1.0178	1	233	233		0.45834	0	1		+		42332	9078	20690	20779	48952	48952					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2016174197197	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.71857	1	1.4544	0.95436	1.9544	0.73579								0	0	0	1.0178	1	296	296		0.45834	0	1		+		42333	9078	20690	20779	48953	48953					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2014648318291	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1339	1	1.8823	1.3823	2.3823	0.7484								0	0	0	1.0178	1	469	469		0.45834	0	1		+		42334	9078	20690	20779	48954	48954					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2015563845634	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2266	1	1.975	1.475	2.475	0.7484								0	0	0	1.0178	1	508	508		0.45834	0	1		+		42335	9078	20690	20779	48955	48955					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2015563845634	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.6597	1	2.4081	1.9081	2.9081	0.7484								0	0	0	1.0178	1	687	687		0.45834	0	1		+		42336	9078	20690	20779	48956	48956					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2011596560478	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.8147	1	2.5631	2.0631	3.0631	0.7484								0	0	0	1.0178	1	752	752		0.45834	0	1		+		42337	9078	20690	20779	48957	48957					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2015869021416	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9734	1	2.7218	2.2218	3.2218	0.7484								0	0	0	1.0178	1	818	818		0.45834	0	1		+		42338	9078	20690	20779	48958	48958					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2012512087822	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3397	1	3.0881	2.5881	3.5881	0.7484								0	0	0	1.0178	1	971	971		0.45834	0	1		+		42339	9078	20690	20779	48959	48959					0.043670010503319645
WTFRKLMP	8	Unmodified	_WTFRKLMP_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	360.2017089724541	3	360.200395	1077.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4437	1	3.1921	2.6921	3.6921	0.7484								0	0	0	1.0178	1	1014	1014		0.45834	0	1		+		42340	9078	20690	20779	48960	48960					0.043670010503319645
WTKAINQL	8	Unmodified	_WTKAINQL_					0	0	0			REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	REV__DNAH2|p.K2074Efs*10|1|0.06|ENSG00000183914|chr17:7786212-7786213|-/TGAGG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2761108279228	2	487.276909	972.539266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.12	1	110.12	109.62	110.62	0								0	0	0	1.0178	1	47680	47680		0.69038	0	1		+		42341	8450	20691	20780	48961	48961					0.0518977765142381
WTKALVAR	8	Unmodified	_WTKALVAR_					0	0	0			REV__ENST00000451442.5_3_20:24943788-24944004:-|nuORF	REV__ENST00000451442.5_3_20:24943788-24944004:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	314.7119323611259	3	315.527388	943.560336	-0.0543	-1.7133E-05	1.1129	0.00035116	1.0586	0.00033403	315.52766181879116	25.168	0.48657	26.885	26.697	27.183	1.7167					33	15	3	0	0	0	2.3239	1	10503	10503		1.0715	0	1	615400	+		42342	13137	20692	20781	48962	48962					0.08629787750942342
WTKGIHKL	8	Unmodified	_WTKGIHKL_					0	0	0			REV__ENST00000480825.6_1_1:36933583-36933964:-|nuORF	REV__ENST00000480825.6_1_1:36933583-36933964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	328.1999389529228	3	328.199272	981.575986	0.6417	0.0002106	1.7282	0.00056718	2.3699	0.00077779	328.19987610102856	32.434	0.83593	32.728	32.123	32.959	0.29431					90	26	5	0	0	0	0.88663	1	13653	13653		3.2813	0	1	78002000	+		42343	9543	20693	20782	48963	48963					0.08446074267999393
WTKGIHKL	8	Unmodified	_WTKGIHKL_					0	0	0			REV__ENST00000480825.6_1_1:36933583-36933964:-|nuORF	REV__ENST00000480825.6_1_1:36933583-36933964:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	328.1994811892509	3	328.199272	981.575986	0.25972	8.524E-05	1.1814	0.00038773	1.4411	0.00047297	328.199639387605	30.652	0.78038	32.467	31.954	32.734	1.8151					92	25	5	0	0	0	0.88663	1	12888	12888		3.2813	0	1	76160000	+		42344	9543	20693	20782	48964	48964					0.08446074267999393
WTKLYRAR	8	Unmodified	_WTKLYRAR_					0	0	0			REV__ENST00000472714.1_1_7:107569804-107570089:-|nuORF	REV__ENST00000472714.1_1_7:107569804-107570089:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	365.2104675173759	3	365.213692	1092.61925	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.05	1	24.265	23.765	24.765	1.2145								0	0	0	1.0178	1	9634	9634		3.2813	0.99853	1		+		42345	13297	20694	20783	48965	48965					0.07664264045274649
WTKRKKLHV	9	Unmodified	_WTKRKKLHV_					0	0	0			REV__ENST00000357607.6_1_X:15544172-15549526:+|nuORF	REV__ENST00000357607.6_1_X:15544172-15549526:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	399.2506591677666	3	399.252258	1194.73495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.34	1	38.34	37.84	38.84	0								0	0	0	0.42693	1	16071	16071		0.96228	0.18574	1		+		42346	12564	20695	20784	48966	48966					0.14536787896122405
WTLIFKGQIF	10	Unmodified	_WTLIFKGQIF_					0	0	0		ENST00000558725.5_1_15:67519241-67546969:-|nuORF	ENST00000558725.5_1_15:67519241-67546969:-|nuORF	ENST00000558725.5_1_15:67519241-67546969:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	418.2426025271416	3	418.241137	1251.70158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.97	1	104.14	103.64	104.64	0.1731								0	0	0	0.66166	1	43903	43903		0.69767	0	1				42347	7315	20696	20785	48967	48967					0.0857974133357402
WTPHGGVQ	8	Unmodified	_WTPHGGVQ_					0	0	0			REV__tr|A0A7D6ZX76|A0A7D6ZX76_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12120PE=4SV=1	REV__tr|A0A7D6ZX76|A0A7D6ZX76_9CLOTDUF1963domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_12120PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	441.2174560427666	2	441.216852	880.419151	1.7117	0.00075523	0.44566	0.00019663	2.1573	0.00095186	441.21668406799176	70.281	0.44913	70.603	70.35	70.799	0.32223					23	14	2	0	0	0	0.89008	1	29437	29437		2.5775	0	1	2422500	+		42348	15757	20697	20786	48968	48968					-0.025842106223194605
WTRDSTHLICA	11	Unmodified	_WTRDSTHLICA_					0	0	0		ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	ENSG00000073050|ENST00000262887|XRCC1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8815795779228	3	434.880162	1301.61866	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.86	1	111.01	110.51	111.51	0.15038								0	0	0	0.63775	1	48062	48062		0	0	1				42349	895	20698	20787	48969	48969					-0.020089434567125863
WTRRRLFCIWL	11	Unmodified	_WTRRRLFCIWL_					0	0	0			REV__ENST00000506423.1_1_4:89198354-89199383:-|nuORF	REV__ENST00000506423.1_1_4:89198354-89199383:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	516.7578613162041	3	517.290607	1548.84999	2.5162	0.0013016	0.66771	0.0003454	3.1839	0.001647	517.6252550889916	90.214	1.4096	90.214	89.495	90.905	0					85	44	3	0	0	0	0.14606	1	37464	37464		0.094841	0	1	1442500	+		42350	13538	20699	20788	48970	48970					0.09752149035625735
WTRRRLFCIWL	11	Unmodified	_WTRRRLFCIWL_					0	0	0			REV__ENST00000506423.1_1_4:89198354-89199383:-|nuORF	REV__ENST00000506423.1_1_4:89198354-89199383:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	517.290607	1548.84999	5.7875	0.0029938	1.8819	0.00097349	7.6694	0.0039673	517.2924075471464	89.078	1.5639	90.125	89.295	90.859	1.0475	-0.044445	0.000924	NaN	0.094841	86	48	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1477500	+		42351	13538	20699	20788							0.09752149035625735
WTSVTAWMKTA	11	Unmodified	_WTSVTAWMKTA_					0	0	0		ENST00000282032.3_1_11:30358169-30358211:+|nuORF	ENST00000282032.3_1_11:30358169-30358211:+|nuORF	ENST00000282032.3_1_11:30358169-30358211:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	641.3181640505791	2	641.318448	1280.62234	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.13	1	113.3	112.8	113.8	0.16914								0	0	0	0.63775	1	49057	49057		5.7319	0.43497	1				42352	5703	20700	20789	48971	48971					-0.006742736828982743
WTVDRYLF	8	Unmodified	_WTVDRYLF_					0	0	0			REV__ENSG00000102755|ENST00000282397|FLT1	REV__ENSG00000102755|ENST00000282397|FLT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	550.2875854372978	2	550.282192	1098.54983	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.1	1	101.3	100.8	101.8	0.20527								0	0	0	1.0178	1	42510	42510		2.5775	0.27475	1		+		42353	9078	20701	20790	48972	48972					0.004497603058325694
WVALFGLVP	9	Unmodified	_WVALFGLVP_					0	0	0			REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	501.2963744997978	2	501.294571	1000.57459	2.5138	0.0012602	2.6418	0.0013243	5.1557	0.0025845	501.29567903356957	72.457	0.27858	72.782	72.611	72.889	0.32494					15	8	2	0	0	0	0.75267	1	30312	30312		5.2307	0.90143	1	885630	+		42354	12019	20702	20791	48973	48973					0.07432440179229616
WVALFGLVP	9	Unmodified	_WVALFGLVP_					0	0	0			REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	501.294571	1000.57459	1.6541	0.00082918	4.2371	0.002124	5.8911	0.0029532	501.29655735325906	72.636	0.2533	72.636	72.557	72.81	0	-0.072682	0.00086116	NaN	5.2307	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	743810	+		42355	12019	20702	20791							0.07432440179229616
WVALFGLVP	9	Unmodified	_WVALFGLVP_					0	0	0			REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	REV__GPR179|p.E2210Lfs*3|1|0.04|ENSG00000277399|chr17:38326941-38326942|-/AAAAAAG|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	501.294571	1000.57459	2.5138	0.0012602	2.6418	0.0013243	5.1557	0.0025845	501.29567903356957	72.457	0.27858	72.782	72.611	72.889	0.32494	0.072682	-0.00073819	NaN	5.2307	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	885630	+		42356	12019	20702	20791							0.07432440179229616
WVARRWGEEN	10	Unmodified	_WVARRWGEEN_					0	0	0			REV__CTSL|p.S117Lfs*10|1|0.42|ENSG00000135047|chr9:87728350-87728350|C/-|frameshift_variant	REV__CTSL|p.S117Lfs*10|1|0.42|ENSG00000135047|chr9:87728350-87728350|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824340701103	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.2486	1	1.9019	1.4019	2.4019	0.65331								0	0	0	0.66264	1	511	511		0	0	1		+		42357	8414	20703	20792	48974	48974					-0.012230481449250874
WVESWNEQIK	10	Unmodified	_WVESWNEQIK_					0	0	0		ENSG00000160471|ENST00000326529|COX6B2	ENSG00000160471|ENST00000326529|COX6B2	ENSG00000160471|ENST00000326529|COX6B2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	659.8273193240166	2	659.824952	1317.63535	2.4429	0.0016119	-1.9991	-0.001319	0.44385	0.00029287	659.8240059002212	44.613	0.31342	45.978	45.836	46.149	1.3653					15	9	2	0	0	0	0.77604	1	18737	18737		14.838	1.7958	1	984580			42358	3561	20704	20793	48975	48975					-0.010761192991594726
WVGGKAAA	8	Unmodified	_WVGGKAAA_					0	0	0			REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	759.4152709841728	1	759.4148	758.407523	2.5028	0.0019007	-2.5801	-0.0019593	-0.077223	-5.8645E-05	759.4131288545518	104.43	0.093018	104.59	104.54	104.64	0.16055					8	4	3	0	0	0	0.89198	1	44247	44247		0	0	1	23217000	+		42359	13777	20705	20794	48976	48976					0.018655923543178687
WVGGKAAA	8	Unmodified	_WVGGKAAA_					0	0	0			REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	759.4148	758.407523	1.3415	0.0010188	-1.4375	-0.0010916	-0.095961	-7.2874E-05	759.4141143323459	104.5	0.071777	104.5	104.46	104.53	0	-0.05133	0.00071056	NaN	0	9	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	24837000	+		42360	13777	20705	20794							0.018655923543178687
WVGGKAAA	8	Unmodified	_WVGGKAAA_					0	0	0			REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	759.4148	758.407523	2.7302	0.0020734	-3.0778	-0.0023373	-0.34757	-0.00026395	759.4128773236074	104.48	0.090775	104.54	104.48	104.57	0.056801	-0.010816	-0.00053512	NaN	0	8	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10818000	+		42361	13777	20705	20794							0.018655923543178687
WVGGKAAA	8	Unmodified	_WVGGKAAA_					0	0	0			REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	759.4148	758.407523	2.5028	0.0019007	-2.5801	-0.0019593	-0.077223	-5.8645E-05	759.4131288545518	104.43	0.093018	104.59	104.54	104.64	0.16055	0.043067	-0.00015713	NaN	0	8	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	23217000	+		42362	13777	20705	20794							0.018655923543178687
WVGGKAAA	8	Unmodified	_WVGGKAAA_					0	0	0			REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	REV__ENST00000540224.1_1_12:12764783-12764930:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	759.4148	758.407523	2.757	0.0020937	-2.9351	-0.002229	-0.1781	-0.00013525	759.4129629998973	104.4	0.075195	104.57	104.52	104.6	0.1731	0.01908	-0.00042676	NaN	0	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	18280000	+		42363	13777	20705	20794							0.018655923543178687
WVIGENIDQQT	11	Unmodified	_WVIGENIDQQT_					0	0	0			REV__ENSG00000138759|ENST00000512123|FRAS1	REV__ENSG00000138759|ENST00000512123|FRAS1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8824645876884	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.672	1	41.534	41.034	42.034	1.8624								0	0	0	0.63775	1	16634	16634		1.4551	0.67859	1		+		42364	10078	20706	20795	48977	48977					-0.013567270243811436
WVIIIALA	8	Unmodified	_WVIIIALA_					0	0	0		tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	898.3290893435478	1	898.576052	897.568775	1.1395	0.0010239	-0.91931	-0.00082607	0.22015	0.00019782	898.5746561294194	107.52	0.11449	107.52	107.47	107.58	0					10	5	3	0	0	0	2.3239	1	46142	46142		0	0	1	5261300			42365	16121	20707	20796	48978	48978					0.11589341667536246
WVIIIALA	8	Unmodified	_WVIIIALA_					0	0	0		tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	898.576052	897.568775	2.8932	0.0025998	-4.6901	-0.0042144	-1.7968	-0.0016146	898.5712394724694	107.49	0.15569	107.65	107.56	107.72	0.15781	0.19579	-0.0012023	NaN	0	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	10940000			42366	16121	20707	20796							0.11589341667536246
WVIIIALA	8	Unmodified	_WVIIIALA_					0	0	0		tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	tr|A0A553SGT9|A0A553SGT9_NIACIRhomboidfamilyintramembraneserineproteaseOS=NialliacirculansOX=1397GN=CEQ21_11610PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	898.576052	897.568775	3.0794	0.0027671	-4.2265	-0.0037979	-1.1471	-0.0010308	898.5718274616215	107.03	0.066681	107.19	107.15	107.21	0.16174	-0.26172	-0.00078578	NaN	0	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2227300			42367	16121	20707	20796							0.11589341667536246
WVKAQLPP	8	Unmodified	_WVKAQLPP_					0	0	0			REV__ENST00000482108.1_2_7:94297339-94297486:+|nuORF	REV__ENST00000482108.1_2_7:94297339-94297486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	469.7795287966728	2	469.776545	937.538538	2.2861	0.001074	2.1204	0.00099609	4.4065	0.0020701	469.7774170268257	76.325	0.51927	76.325	76.041	76.561	0					43	16	3	0	0	0	0.89051	1	31701	31701		2.3027	0	1	15131000	+		42368	13369	20708	20797	48979	48979					0.06726983002374709
WVKAQLPP	8	Unmodified	_WVKAQLPP_					0	0	0			REV__ENST00000482108.1_2_7:94297339-94297486:+|nuORF	REV__ENST00000482108.1_2_7:94297339-94297486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	469.7796203494072	2	469.776545	937.538538	3.0142	0.001416	1.1865	0.00055738	4.2007	0.0019734	469.7769894371031	76.172	0.51747	76.493	76.176	76.694	0.32163					41	16	3	0	0	0	0.89051	1	31762	31762		2.3027	0	1	27676000	+		42369	13369	20708	20797	48980	48980					0.06726983002374709
WVKEFHTWW	9	Unmodified	_WVKEFHTWW_					0	0	0		ENSG00000225830|ENST00000355832|ERCC6;ERCC6|p.A1270Pfs*25|1|0.08|ENSG00000225830|chr10:49461527-49461527|C/-|frameshift_variant;ERCC6|p.H1035Ifs*2|1|0.37|ENSG00000225830|chr10:49470857-49470857|G/-|frameshift_variant	ENSG00000225830|ENST00000355832|ERCC6	ENSG00000225830|ENST00000355832|ERCC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	659.8263427615166	2	659.822015	1317.62948	2.1426	0.0014137	4.0316	0.0026601	6.1742	0.0040739	659.8247949653738	44.062	0.31567	46.005	45.799	46.115	1.9438					17	9	2	0	0	0	0.68551	1	18469	18469		7.9102	0.3012	1	830590			42370	5292	20709	20798	48981	48981					-0.016631730201424944
WVLVALAK	8	Unmodified	_WVLVALAK_					0	0	0		nc|ENSG00000034533|Q2TB18-2|ASTE1;ENSG00000034533|ENST00000264992|ASTE1	nc|ENSG00000034533|Q2TB18-2|ASTE1	nc|ENSG00000034533|Q2TB18-2|ASTE1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	301.1276733279228	3	300.528618	898.564024	-3.0283	-0.0009101	-0.7745	-0.00023276	-3.8028	-0.0011429	300.528295610748	23.526	0.88317	23.526	22.986	23.87	0					34	28	2	0	0	0	2.3239	1	9891	9891		0	0	1	393290			42371	643	20710	20799	48982	48982					0.11068457524777386
WVRRMRLA	8	Unmodified	_WVRRMRLA_					0	0	0			REV__ENST00000370249.2_1_X:152613033-152613228:+|nuORF	REV__ENST00000370249.2_1_X:152613033-152613228:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	544.3539916872978	2	544.31892	1086.62329	2.7551	0.0014996	0.35126	0.0001912	3.1064	0.0016908	544.3189467644836	107.58	0.0979	107.63	107.58	107.68	0.052452					8	4	3	0	0	0	2.3239	1	46067	46067		0	0	1	28294000	+		42372	12656	20711	20800	48983	48983					0.08344030267357994
WVSSLRPL	8	Unmodified	_WVSSLRPL_					0	0	0		nc|ENSG00000141449|Q9C091-3|GREB1L;ENSG00000141449|ENST00000424526|GREB1L;ENST00000578955.1_1_18:19057140-19088617:+|nuORF	nc|ENSG00000141449|Q9C091-3|GREB1L	nc|ENSG00000141449|Q9C091-3|GREB1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	479.2803527712822	2	479.279452	956.544351	2.5966	0.0012445	-1.1986	-0.00057445	1.3981	0.00067006	479.2795660419581	63.498	0.87223	64.911	64.439	65.311	1.4134					38	27	2	0	0	0	0.88587	1	26583	26583		5.2307	0	1	1031500			42373	2959	20712	20801	48984	48984					0.0643408151404401
WVTLGLKKK	9	Unmodified	_WVTLGLKKK_					0	0	0			REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	536.8464233279228	2	536.847502	1071.68045	1.1427	0.00061344	-1.9893	-0.001068	-0.84666	-0.00045453	536.8462483728927	101.93	0.30338	101.93	101.74	102.04	0					7	4	2	0	0	0	0.85019	1	42700	42700		0.52476	0.066424	1	1719400	+		42374	15539	20713	20802	48985	48985					0.14747776024682935
WVTLGLKKK	9	Unmodified	_WVTLGLKKK_					0	0	0			REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	REV__tr|A0A7D6VVV5|A0A7D6VVV5_9CLOTGlycosyltransferasefamily39proteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01860PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	536.847502	1071.68045	1.1427	0.00061344	-1.9893	-0.001068	-0.84666	-0.00045453	536.8462483728927	101.93	0.30338	101.93	101.74	102.04	0	-0.031147	0.00035129	NaN	0.52476	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1719400	+		42375	15539	20713	20802							0.14747776024682935
WVTLLLLI	8	Unmodified	_WVTLLLLI_					0	0	0			REV__nc|ENSG00000100926|O15321-2|TM9SF1	REV__nc|ENSG00000100926|O15321-2|TM9SF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2158080935478	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.837	1	13.937	13.437	14.437	0.09944								0	0	0	1.0178	1	5743	5743		0	0	1		+		42376	9015	20714	20803	48986	48986					0.14026183873147602
WVTLLLLI	8	Unmodified	_WVTLLLLI_					0	0	0			REV__nc|ENSG00000100926|O15321-2|TM9SF1	REV__nc|ENSG00000100926|O15321-2|TM9SF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	324.2173339724541	3	324.21604	969.62629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.88	1	103.94	103.44	104.44	0.059502								0	0	0	1.0178	1	43690	43690		0	0	1		+		42377	9015	20714	20803	48987	48987					0.14026183873147602
WVWWKSHF	8	Unmodified	_WVWWKSHF_					0	0	0			REV__ENSG00000155085|ENST00000424296|AK9	REV__ENSG00000155085|ENST00000424296|AK9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.2961303591728	2	588.292894	1174.57123	2.9622	0.0017426	3.4204	0.0020122	6.3826	0.0037548	588.2954237269403	70.31	0.22328	71.663	71.584	71.807	1.3536					10	6	2	0	0	0	0.87106	1	29521	29521		14.582	3.7578	1	768780	+		42378	10488	20715	20804	48988	48988					-0.00906809874800274
WVYLLLRKILL	11	Unmodified	_WVYLLLRKILL_					0	0	0		nc|ENSG00000050628|P43115-3|PTGER3;nc|ENSG00000050628|P43115-4|PTGER3;nc|ENSG00000050628|P43115-2|PTGER3;ENSG00000050628|ENST00000306666|PTGER3;nc|ENSG00000050628|P43115-7|PTGER3;nc|ENSG00000050628|P43115-8|PTGER3;nc|ENSG00000050628|P43115-9|PTGER3;nc|ENSG00000050628|P43115-5|PTGER3;nc|ENSG00000050628|P43115-11|PTGER3;nc|ENSG00000050628|P43115-6|PTGER3;nc|ENSG00000050628|P43115-12|PTGER3;nc|ENSG00000050628|P43115-10|PTGER3	nc|ENSG00000050628|P43115-3|PTGER3	nc|ENSG00000050628|P43115-3|PTGER3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	715.4711791872978	2	715.468315	1428.92208	2.642	0.0018903	1.0812	0.00077354	3.7232	0.0026638	715.4684010979219	107.21	0.1965	107.37	107.26	107.45	0.15781					34	9	5	0	0	0	1.0405	1	46033	46033		0	0	1	172980000			42379	701	20716	20805	48989	48989					0.22477386660989396
WWASSPLR	8	Unmodified	_WWASSPLR_					0	0	0		ENST00000390401.2_1_3:119187859-119190300:+|nuORF;ENSG00000163389|ENST00000295588|POGLUT1	ENST00000390401.2_1_3:119187859-119190300:+|nuORF	ENST00000390401.2_1_3:119187859-119190300:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	501.7634765505791	2	501.761426	1001.5083	1.8212	0.0009138	0.79502	0.00039891	2.6162	0.0013127	501.7617679528388	75.115	0.22063	75.115	74.995	75.216	0					12	6	2	0	0	0	0.89051	1	31292	31292		2.3027	0	1	723930			42380	3675	20717	20806	48990	48990					0.007606243371810706
WWDWARWER	9	Unmodified	_WWDWARWER_					0	0	0		NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant;NAGLU|p.L184Tfs*8|1|0.09|ENSG00000108784|chr17:42538356-42538357|-/A|frameshift_variant;NAGLU|p.W268Lfs*5|1|0.1|ENSG00000108784|chr17:42540985-42540986|-/C|frameshift_variant;NAGLU|p.W268Tfs*42|1|0.1|ENSG00000108784|chr17:42540986-42540987|-/ACTCCTTCGTGTGGTGGGACTGGGCCCGC|frameshift_variant;ENSG00000108784|ENST00000225927|NAGLU	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	464.2182189822197	3	464.219506	1389.63669	0.73672	0.000342	-2.1419	-0.00099433	-1.4052	-0.00065233	464.21845240512147	20.673	0.26035	22.247	22.089	22.349	1.5748					10	8	2	0	0	0	0.82654	1	8614	8614		2.2828	0.19881	1	748070			42381	1647	20718	20807	48991	48991					-0.04254440419731509
WWDWARWER	9	Unmodified	_WWDWARWER_					0	0	0		NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant;NAGLU|p.L184Tfs*8|1|0.09|ENSG00000108784|chr17:42538356-42538357|-/A|frameshift_variant;NAGLU|p.W268Lfs*5|1|0.1|ENSG00000108784|chr17:42540985-42540986|-/C|frameshift_variant;NAGLU|p.W268Tfs*42|1|0.1|ENSG00000108784|chr17:42540986-42540987|-/ACTCCTTCGTGTGGTGGGACTGGGCCCGC|frameshift_variant;ENSG00000108784|ENST00000225927|NAGLU	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	464.219506	1389.63669	1.3648	0.00063355	-2.353	-0.0010923	-0.98827	-0.00045877	464.2184570073107	22.037	0.29037	22.26	22.084	22.374	0.223	0.011793	-0.00079387	NaN	2.2828	26	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2845300			42382	1647	20718	20807							-0.04254440419731509
WWDWARWER	9	Unmodified	_WWDWARWER_					0	0	0		NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant;NAGLU|p.L184Tfs*8|1|0.09|ENSG00000108784|chr17:42538356-42538357|-/A|frameshift_variant;NAGLU|p.W268Lfs*5|1|0.1|ENSG00000108784|chr17:42540985-42540986|-/C|frameshift_variant;NAGLU|p.W268Tfs*42|1|0.1|ENSG00000108784|chr17:42540986-42540987|-/ACTCCTTCGTGTGGTGGGACTGGGCCCGC|frameshift_variant;ENSG00000108784|ENST00000225927|NAGLU	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	NAGLU|p.E153V|1|0.3|ENSG00000108784|chr17:42537472-42537472|A/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	464.219506	1389.63669	1.1709	0.00054357	-1.8752	-0.00087052	-0.7043	-0.00032695	464.5530947267895	21.084	0.29168	22.209	22.013	22.305	1.1254	-0.039371	-0.00012847	NaN	2.2828	23	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1623200			42383	1647	20718	20807							-0.04254440419731509
WWECCVHH	8	Unmodified	_WWECCVHH_					0	0	0		ENST00000509294.1_1_5:470082-471349:+|nuORF;ENST00000515601.6_1_5:471214-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	ENST00000509294.1_1_5:470082-471349:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.2168456912041	2	550.215472	1098.41639	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.09	1	111.13	110.63	111.63	0.047043								0	0	0	1.0178	1	47902	47902		0	0	1				42384	7022	20719	20808	48992	48992					-0.12888125343147294
WWEKKRTWLLK	11	Unmodified	_WWEKKRTWLLK_					0	0	0		nc|ENSG00000073712|Q96AC1-2|FERMT2;ENSG00000073712|ENST00000341590|FERMT2;nc|ENSG00000073712|Q96AC1-3|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	nc|ENSG00000073712|Q96AC1-2|FERMT2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.9728881716728	3	525.304911	1572.8929	2.7338	0.0014361	1.2301	0.00064617	3.9639	0.0020822	525.305708659133	44.76	0.12387	46.125	46.056	46.18	1.3653					5	3	2	0	0	0	0.14606	1	18775	18775		0.08335	0	1	379290			42385	903	20720	20809	48993	48993					0.12937242364682788
WWERRDRRFRS	11	Unmodified	_WWERRDRRFRS_					0	0	0		ENST00000530167.1_1_11:118964940-118965138:-|nuORF	ENST00000530167.1_1_11:118964940-118965138:-|nuORF	ENST00000530167.1_1_11:118964940-118965138:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2183105349541	3	550.622185	1648.84472	0.48653	0.00026789	-0.68594	-0.00037769	-0.19941	-0.0001098	550.6222626356516	23.356	0.1842	25.007	24.9	25.085	1.6511					11	5	3	0	0	0	0.14606	1	9730	9730		0	0	1	382660			42386	7161	20721	20810	48994	48994					0.046255614973233605
WWLHRHHT	8	Unmodified	_WWLHRHHT_					0	0	0		ENST00000600927.1_3_19:57904156-57904294:+|nuORF	ENST00000600927.1_3_19:57904156-57904294:+|nuORF	ENST00000600927.1_3_19:57904156-57904294:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	586.7983276247978	2	586.796666	1171.57878	2.4948	0.0014639	-0.11114	-6.5217E-05	2.3837	0.0013987	586.7965955766559	88.243	0.33894	88.478	88.322	88.661	0.2347					21	10	3	0	0	0	0.89176	1	37042	37042		0.79363	0	1	1495300			42387	7540	20722	20811	48995	48995					-0.00014657554515906668
WWMQRRWPG	9	Unmodified	_WWMQRRWPG_					0	0	0		ENST00000247161.7_1_X:47500674-47500782:-|nuORF	ENST00000247161.7_1_X:47500674-47500782:-|nuORF	ENST00000247161.7_1_X:47500674-47500782:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8829833865166	3	434.881948	1301.62402	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5456	1	2.1989	1.6989	2.6989	0.65331								0	0	0	0.42693	1	633	633		0.26902	0.1097	1				42388	5577	20723	20812	48996	48996					-0.014731750836290303
WWRLFTKVK	9	Unmodified	_WWRLFTKVK_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;CHD2-MYH9|1|fusion;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000105357|Q7Z406-4|MYH14;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;nc|ENSG00000133392|P35749-4|MYH11	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.3730956912041	2	632.371675	1262.7288	2.8601	0.0018086	-2.1178	-0.0013392	0.74231	0.00046942	632.3702984722493	107.38	0.075912	107.53	107.51	107.58	0.15781					11	3	4	0	0	0	0.85019	1	46192	46192		0.52476	0.066424	1	27073000			42389	1266;2569;1511	20724	20813	48997	48997					0.1079426966457504
WWRLFTKVK	9	Unmodified	_WWRLFTKVK_					0	0	0		nc|ENSG00000105357|Q7Z406-4|MYH14;nc|ENSG00000105357|Q7Z406|MYH14;nc|ENSG00000105357|Q7Z406-6|MYH14;ENSG00000105357|ENST00000642316|MYH14;nc|ENSG00000105357|Q7Z406-5|MYH14;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;ENSG00000100345|ENST00000216181|MYH9;nc|ENSG00000100345|P35579-2|MYH9;CHD2-MYH9|1|fusion;nc|ENSG00000133392|P35749-4|MYH11;nc|ENSG00000133392|P35749-3|MYH11;ENSG00000133392|ENST00000300036|MYH11;nc|ENSG00000133392|P35749-2|MYH11	nc|ENSG00000105357|Q7Z406-4|MYH14;MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant;nc|ENSG00000133392|P35749-4|MYH11	MYH9|p.A1773Sfs*19|1|0.04|ENSG00000100345|chr22:36285287-36285288|-/T|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	632.371675	1262.7288	2.7685	0.0017507	-1.3565	-0.00085782	1.412	0.00089293	632.3712260473109	107.37	0.096573	107.53	107.49	107.58	0.15795	-0.0015425	0.00039035	NaN	0.52476	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	17551000			42390	1266;2569;1511	20724	20813							0.1079426966457504
WWRRPRRPRRL	11	Unmodified	_WWRRPRRPRRL_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.9961425662041	3	545.662426	1633.96545	1.6432	0.00089663	-3.2265	-0.0017606	-1.5833	-0.00086395	545.6609061177411	93.463	0.79322	93.463	93.107	93.9	0					34	24	2	0	0	0	1.0402	1	39062	39062		0.094841	0	1	537940	+		42391	12676	20725	20814	48998	48998					0.17382434001456204
WWRRPRRPRRL	11	Unmodified	_WWRRPRRPRRL_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	545.662426	1633.96545	1.6432	0.00089663	-3.2265	-0.0017606	-1.5833	-0.00086395	545.6609061177411	93.463	0.79322	93.463	93.107	93.9	0	-0.11716	-0.00029618	NaN	0.094841	34	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	537940	+		42392	12676	20725	20814							0.17382434001456204
WWRRPRRPRRL	11	Unmodified	_WWRRPRRPRRL_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	545.662426	1633.96545	2.6726	0.0014583	-3.2764	-0.0017878	-0.60378	-0.00032946	545.6608436962263	93.438	0.54828	93.606	93.322	93.87	0.16835	0.025762	-0.00037782	NaN	0.094841	24	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	386340	+		42393	12676	20725	20814							0.17382434001456204
WWRRPRRPRRL	11	Unmodified	_WWRRPRRPRRL_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	545.662426	1633.96545	4.0232	0.0021953	-2.0377	-0.0011119	1.9856	0.0010835	545.6612811183013	92.63	0.85132	93.566	93.211	94.062	0.93623	-0.014755	0.0016499	NaN	0.094841	39	25	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	299520	+		42394	12676	20725	20814							0.17382434001456204
WWRRPRRPRRL	11	Unmodified	_WWRRPRRPRRL_					0	0	0			REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	REV__ENST00000372022.5_1_9:136199397-136199478:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	545.662426	1633.96545	3.2585	0.001778	-4.2888	-0.0023403	-1.0303	-0.00056222	545.6601715526989	92.36	0.81223	93.687	93.244	94.057	1.3269	0.10616	-0.0020352	NaN	0.094841	28	24	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346620	+		42395	12676	20725	20814							0.17382434001456204
WWRWRRARWQP	11	Unmodified	_WWRWRRARWQP_					0	0	0		nc|ENSG00000171160|Q8NDC4-2|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	nc|ENSG00000171160|Q8NDC4-2|MORN4	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.9695922732353	3	561.967515	1682.88072	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.831	1	97.116	96.616	97.616	0.28442								0	0	0	0.63775	1	40744	40744		0	0	1				42396	7927	20726	20815	48999	48999					0.06659063464871906
WWWGSYLWWRF	11	Unmodified	_WWWGSYLWWRF_					0	0	0			REV__sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	REV__sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.2679321169853	3	558.266456	1671.77754	0.71096	0.00039691	1.3338	0.00074463	2.0448	0.0011415	558.2674123451753	29.054	0.24657	29.054	28.932	29.178	0					12	7	2	0	0	0	1.0405	1	12192	12192		0	0	1	573270	+		42397	14646	20727	20816	49000	49000					-0.0314786176634243
WWWGSYLWWRF	11	Unmodified	_WWWGSYLWWRF_					0	0	0			REV__sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	REV__sp|P09705|US29_HCMVAUncharacterizedproteinHHRF4OS=Humancytomegalovirus(strainAD169)OX=10360GN=US29PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	558.6014282107353	3	558.266456	1671.77754	0.82565	0.00046093	0.97429	0.00054391	1.7999	0.0010048	558.2666027362111	31.584	0.21904	31.584	31.441	31.66	0					16	6	4	0	0	0	1.0402	1	13218	13218		0.094841	0.094841	1	482890	+		42398	14646	20727	20816	49001	49001					-0.0314786176634243
WWWPQWWLWRY	11	Unmodified	_WWWPQWWLWRY_					0	0	0			REV__chr12:54282823-54283827|429|67.56|0.0|22.69|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54282823-54283827|429|67.56|0.0|22.69|+|1|HNRNPA1,HNRNPA1|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	896.9319946169853	2	896.93042	1791.84629	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.363	1	98.619	98.119	99.119	0.25636								0	0	0	0.63775	1	41393	41393		0	0	1		+		42399	8251	20728	20817	49002	49002					-0.017961974665922753
WWWWPQWWLWR	11	Unmodified	_WWWWPQWWLWR_					0	0	0			REV__chr12:54282823-54283827|429|67.56|0.0|22.69|+|1|HNRNPA1,HNRNPA1|1	REV__chr12:54282823-54283827|429|67.56|0.0|22.69|+|1|HNRNPA1,HNRNPA1|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	454.2202636599541	4	454.722844	1814.86227	2.0137	0.00091569	-2.1134	-0.00096102	-0.099681	-4.5327E-05	454.7217134761612	51.01	0.25393	51.01	50.913	51.167	0					12	7	2	0	0	0	0.14606	1	21329	21329		0.08335	0.08335	1	1376900	+		42400	8251	20729	20818	49003	49003					-0.012564912296966213
WYDGYDEYH	9	Unmodified	_WYDGYDEYH_					0	0	0			REV__ENSG00000130234|ENST00000252519|ACE2	REV__ENSG00000130234|ENST00000252519|ACE2	MSMS	GG20161007_CRH_Patient100_A02_01	1	624.2361938357353	2	624.235635	1246.45672	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.196	1	51.196	50.696	51.696	0								0	0	0	0.42693	1	21351	21351		0.6015	0	1		+		42401	9771	20730	20819	49004	49004					-0.15665208938025899
WYKFYNFRFYY	11	Unmodified	_WYKFYNFRFYY_					0	0	0			REV__tr|A0A7D6VVM5|A0A7D6VVM5_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_05535PE=4SV=1	REV__tr|A0A7D6VVM5|A0A7D6VVM5_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_05535PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	848.9055663943291	2	848.900994	1695.78744	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.201	1	71.201	70.701	71.701	0								0	0	0	0.63775	1	29653	29653		0.35063	0.35063	1		+		42402	15532	20731	20820	49005	49005					-0.032627185516048485
WYKRHDRLEER	11	Unmodified	_WYKRHDRLEER_					0	0	0			REV__CD300LG|p.S135Ffs*46|1|0.07|ENSG00000161649|chr17:43852933-43852934|-/A|frameshift_variant	REV__CD300LG|p.S135Ffs*46|1|0.07|ENSG00000161649|chr17:43852933-43852934|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	794.9171020388603	2	794.41058	1586.80661	2.0871	0.001658	2.6789	0.0021282	4.766	0.0037861	794.4131290755939	78.041	0.47916	79.322	79.137	79.616	1.2809					36	15	3	0	0	0	1.0249	1	32744	32744		2.2828	1.0894	1	3827000	+		42403	8190	20732	20821	49006	49006					0.036676307920060935
WYKRHDRLEER	11	Unmodified	_WYKRHDRLEER_					0	0	0			REV__CD300LG|p.S135Ffs*46|1|0.07|ENSG00000161649|chr17:43852933-43852934|-/A|frameshift_variant	REV__CD300LG|p.S135Ffs*46|1|0.07|ENSG00000161649|chr17:43852933-43852934|-/A|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	794.41058	1586.80661	2.0871	0.001658	2.6789	0.0021282	4.766	0.0037861	794.4131290755939	78.041	0.47916	79.322	79.137	79.616	1.2809	-0.021689	0.00017377	NaN	2.2828	36	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3827000	+		42404	8190	20732	20821							0.036676307920060935
WYKYFQYLTFM	11	Unmodified	_WYKYFQYLTFM_					0	0	0		nc|ENSG00000215296|A8MYB1|TMCO5B	nc|ENSG00000215296|A8MYB1|TMCO5B	nc|ENSG00000215296|A8MYB1|TMCO5B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	795.3760253787041	2	795.378506	1588.74246	0.92809	0.00073818	-4.0327	-0.0032075	-3.1046	-0.0024693	795.375728176032	24.113	0.34144	25.354	25.206	25.547	1.241					20	10	3	0	0	0	1.037	1	10075	10075		1.0715	0.76443	1	722490			42405	7997	20733	20822	49007	49007					-0.028362854091483314
WYKYFQYLTFM	11	Unmodified	_WYKYFQYLTFM_					0	0	0		nc|ENSG00000215296|A8MYB1|TMCO5B	nc|ENSG00000215296|A8MYB1|TMCO5B	nc|ENSG00000215296|A8MYB1|TMCO5B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	795.378506	1588.74246	0.20191	0.00016059	-4.2453	-0.0033766	-4.0434	-0.003216	795.3756976824159	23.803	0.27446	25.488	25.387	25.662	1.6845	0.13133	1.2087E-05	NaN	1.0715	20	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	946090			42406	7997	20733	20822							-0.028362854091483314
WYLIIISLDS	10	Unmodified	_WYLIIISLDS_					0	0	0			REV__ENSG00000152078|ENST00000370203|TLCD4	REV__ENSG00000152078|ENST00000370203|TLCD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.8408080935478	2	611.839539	1221.66453	2.6402	0.0016154	0.16517	0.00010106	2.8054	0.0017164	611.8386905125108	85.437	1.1973	86.569	86.152	87.35	1.1326					120	47	3	0	0	0	0.89646	1	35816	35816		1.8442	0	1	107710000	+		42407	10412	20734	20823	49008	49008					0.06256024997151144
WYLIIISLDS	10	Unmodified	_WYLIIISLDS_					0	0	0			REV__ENSG00000152078|ENST00000370203|TLCD4	REV__ENSG00000152078|ENST00000370203|TLCD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.8564941287041	2	611.839539	1221.66453	3.0617	0.0018733	-2.0692	-0.001266	0.99249	0.00060725	612.340930415207	85.112	1.4263	86.708	86.064	87.491	1.5962					277	55	7	0	0	0	0.20516	1	35498	35498		48.346	16.229	1	138820000	+		42408	10412	20734	20823	49009	49009					0.06256024997151144
WYMVTIVH	8	Unmodified	_WYMVTIVH_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1807739138603	3	350.181001	1047.52117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.887	1	89.111	88.611	89.611	0.22359								0	0	0	1.0178	1	37263	37263		1.6526	0	1				42409	5058	20735	20824	49010	49010					-0.0006868059492717293
WYMVTIVH	8	Unmodified	_WYMVTIVH_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1812316775322	3	350.181001	1047.52117	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.173	1	89.396	88.896	89.896	0.22359								0	0	0	1.0178	1	37379	37379		1.6526	0	1				42410	5058	20735	20824	49011	49011					-0.0006868059492717293
WYQTKFETL	9	Unmodified	_WYQTKFETL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENST00000552183.1_1_12:52635324-52638266:+|nuORF;ENST00000551130.1_1_12:52635330-52637101:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.3072387576103	2	608.305864	1214.59717	1.8519	0.0011265	0.73083	0.00044457	2.5827	0.0015711	608.3063004483274	45.755	0.62855	47.13	46.864	47.493	1.3751					65	19	5	0	0	0	1.4933E-05	4	19156	19106;19156;19194;19233		209.87	124.6	1	34721000		+	42411	345	20736	20825	49012;49013;49014;49015	49013					-0.0015400521381252474
WYQTKFETL	9	Unmodified	_WYQTKFETL_					0	0	0		CON__P08729;CON__Q3KNV1;ENSG00000135480|ENST00000331817|KRT7;DTX4-KRT7|1|fusion;CON__Q9DCV7;ENST00000552183.1_1_12:52635324-52638266:+|nuORF;ENST00000551130.1_1_12:52635330-52637101:+|nuORF	CON__P08729	CON__P08729	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3069946169853	2	608.305864	1214.59717	1.6615	0.0010107	0.63918	0.00038882	2.3007	0.0013995	608.3062419404152	45.206	0.59712	47.165	46.928	47.525	1.9596					68	18	5	0	0	0	1.4933E-05	4	18980	18892;18941;18980;19023		209.87	144.64	1	32576000		+	42412	345	20736	20825	49016;49017;49018;49019	49018					-0.0015400521381252474
WYSIDVGGNCF	11	Unmodified	_WYSIDVGGNCF_					0	0	0			REV__nc|ENSG00000154263|Q8WWZ4-3|ABCA10	REV__nc|ENSG00000154263|Q8WWZ4-3|ABCA10	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	420.8487731814384	3	420.849979	1259.52811	-0.45575	-0.0001918	-1.5694	-0.00066047	-2.0251	-0.00085227	420.8493888165326	12.435	0.64898	12.435	12.22	12.869	0					31	20	2	0	0	0	0.7432	1	5124	5124		17.049	0.77403	1	4981800	+		42413	14464	20737	20826	49020	49020					-0.09127412505017674
WYSIDVGGNCF	11	Unmodified	_WYSIDVGGNCF_					0	0	0			REV__nc|ENSG00000154263|Q8WWZ4-3|ABCA10	REV__nc|ENSG00000154263|Q8WWZ4-3|ABCA10	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	420.849979	1259.52811	0.46094	0.00019398	-4.0371	-0.001699	-3.5762	-0.001505	420.8486636907848	12.543	0.31004	12.632	12.493	12.803	0.089381	0.098509	-0.0016458	NaN	17.049	19	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	863140	+		42414	14464	20737	20826							-0.09127412505017674
WYTEIFCGRK	10	Unmodified	_WYTEIFCGRK_					0	0	0		Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|7|2|sense	Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|7|2|sense	Tigger1_dup9834|chr14:19106484-19106883:-|1.64118294126502|0.2064126540684672|2.99|422.0|7|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824035525322	3	434.881502	1301.62268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.729	1	13.423	12.923	13.923	0.69396								0	0	0	0.66151	1	5286	5286		1.9064	0.57673	1				42415	16023	20738	20827	49021	49021					-0.016068539630396117
WYVLERYVY	9	Unmodified	_WYVLERYVY_					0	0	0		KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant;nc|ENSG00000089094|Q8NHM5-5|KDM2B;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;ENSG00000089094|ENST00000377071|KDM2B;ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant;ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.7488	1	5.7488	5.2488	6.2488	0								0	0	0	0.42693	1	2362	2362		0.26902	0	1				42416	4267;1118	20739	20828	49022	49022					0.011222740571838585
WYVLERYVY	9	Unmodified	_WYVLERYVY_					0	0	0		KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant;nc|ENSG00000089094|Q8NHM5-5|KDM2B;ENST00000538503.5_1_12:121882954-121987523:-|nuORF;nc|ENSG00000089094|Q8NHM5-4|KDM2B;nc|ENSG00000089094|Q8NHM5-2|KDM2B;nc|ENSG00000089094|Q8NHM5-3|KDM2B;ENSG00000089094|ENST00000377071|KDM2B;ENSG00000173120|ENST00000529006|KDM2A;nc|ENSG00000173120|Q9Y2K7-2|KDM2A;nc|ENSG00000173120|Q9Y2K7-3|KDM2A	KDM2B|p.T484Hfs*28|1|0.13|ENSG00000089094|chr12:121509765-121509766|-/A|frameshift_variant;ENSG00000173120|ENST00000529006|KDM2A	ENSG00000173120|ENST00000529006|KDM2A	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884460330009	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.943	1	27.203	26.703	27.703	1.2594								0	0	0	0.42693	1	10865	10865		0.26902	0	1				42417	4267;1118	20739	20828	49023	49023					0.011222740571838585
YAAELHLVH	9	Unmodified	_YAAELHLVH_					0	0	0		ENST00000520996.5_1_8:86376310-86386651:+|nuORF;ENSG00000104267|ENST00000285379|CA2;ENSG00000164879|ENST00000285381|CA3	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	ENST00000520996.5_1_8:86376310-86386651:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	351.5228149294853	3	351.522303	1051.54508	-1.755	-0.00061692	2.118	0.00074451	0.36295	0.00012759	351.5231166409144	27.385	0.24023	27.385	27.231	27.471	0					17	7	3	0	0	0	0.15478	1	11429	11429		27.629	21.897	1	704970			42418	1455	20740	20829	49024	49024					0.02136876163103807
YAAILQSCNRN	11	Unmodified	_YAAILQSCNRN_					0	0	0			REV__ENSG00000092148|ENST00000399332|HECTD1	REV__ENSG00000092148|ENST00000399332|HECTD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	418.2096740603447	3	418.208278	1251.60301	0.8134	0.00034017	2.0474	0.00085623	2.8608	0.0011964	418.2091968020909	43.763	0.70153	43.763	43.523	44.225	0					45	21	4	0	0	0	0.88359	1	18334	18334		5.8681	1.1522	1	4955400	+		42419	8912	20741	20830	49025	49025					-0.012732299737990616
YAAKFLKKRRR	11	Unmodified	_YAAKFLKKRRR_					0	0	0		ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	719.5994140505791	2	718.951687	1435.88882	2.6213	0.0018846	-0.33758	-0.0002427	2.2838	0.0016419	718.9520497262151	107.21	0.11397	107.36	107.32	107.43	0.15781					7	5	2	0	0	0	0.14606	1	46079	46079		0.35063	0.043601	1	5164600			42420	1020	20742	20831	49026	49026					0.18831197661597798
YAAKFLKKRRR	11	Unmodified	_YAAKFLKKRRR_					0	0	0		ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	ENSG00000081320|ENST00000263955|STK17B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	718.951687	1435.88882	2.6065	0.001874	-0.29289	-0.00021057	2.3137	0.0016634	718.9507131975209	107.2	0.098763	107.36	107.29	107.39	0.15795	-0.00081606	2.6038E-05	NaN	0.35063	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6599100			42421	1020	20742	20831							0.18831197661597798
YACNMNDDMH	10	Unmodified	_YACNMNDDMH_					0	0	0		tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2110473513603	2	607.207183	1212.39981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.98	1	119.21	118.71	119.71	0.23128								0	0	0	0.66237	1	51414	51414		0.45834	0	1				42422	16589	20743	20832	49027	49027					-0.1978903908209304
YACNMNDDMH	10	Unmodified	_YACNMNDDMH_					0	0	0		tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2106811404228	2	607.207183	1212.39981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.09	1	119.33	118.83	119.83	0.23128								0	0	0	0.66237	1	51462	51462		0.45834	0	1				42423	16589	20743	20832	49028	49028					-0.1978903908209304
YACNMNDDMH	10	Unmodified	_YACNMNDDMH_					0	0	0		tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2107421755791	2	607.207183	1212.39981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.43	1	119.67	119.17	120.17	0.243								0	0	0	0.66237	1	51596	51596		0.45834	0	1				42424	16589	20743	20832	49029	49029					-0.1978903908209304
YACNMNDDMH	10	Unmodified	_YACNMNDDMH_					0	0	0		tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	tr|A0A553SS17|A0A553SS17_NIACI2-methylcitratedehydrataseOS=NialliacirculansOX=1397GN=CEQ21_02245PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	607.2108032107353	2	607.207183	1212.39981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.78	1	120.03	119.53	120.53	0.243								0	0	0	0.66237	1	51739	51739		0.45834	0	1				42425	16589	20743	20832	49030	49030					-0.1978903908209304
YADFEEYY	8	Unmodified	_YADFEEYY_					0	0	0			REV__tr|A0A553SS65|A0A553SS65_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02430PE=4SV=1	REV__tr|A0A553SS65|A0A553SS65_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02430PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	550.2186767458916	2	550.21638	1098.41821	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.644	1	91.834	91.334	92.334	0.19042								0	0	0	1.0178	1	38383	38383		0.69038	0.16561	1		+		42426	15195	20744	20833	49031	49031					-0.12706514572550986
YADPSILYI	9	Unmodified	_YADPSILYI_					0	0	0		ENST00000490851.5_1_7:18832955-19035682:+|nuORF;nc|ENSG00000048052|Q9UKV0-4|HDAC9;nc|ENSG00000048052|Q9UKV0-2|HDAC9;nc|ENSG00000048052|Q9UKV0|HDAC9;nc|ENSG00000048052|Q9UKV0-6|HDAC9;nc|ENSG00000048052|Q9UKV0-5|HDAC9;ENSG00000048052|ENST00000686413|HDAC9	ENST00000490851.5_1_7:18832955-19035682:+|nuORF	ENST00000490851.5_1_7:18832955-19035682:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1054.549243152142	1	1054.54554	1053.53826	3.5392	0.0037322	-0.70091	-0.00073914	2.8383	0.0029931	1054.5455490920438	69.897	0.66826	71.735	71.436	72.104	1.8378					36	20	2	0	0	0	0.22519	1	29410	29410		30.225	3.3412	1	4724100			42427	684	20745	20834	49032	49032					0.01363518491848481
YAEKIAII	8	Unmodified	_YAEKIAII_					0	0	0			REV__ENSG00000104537|ENST00000419625|ANXA13	REV__ENSG00000104537|ENST00000419625|ANXA13	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	460.7773010134697	2	460.776211	919.537869	2.496	0.0011501	-0.095268	-4.3897E-05	2.4008	0.0011062	460.7761363911497	44.279	0.73038	46.223	45.989	46.719	1.9438					50	22	3	0	0	0	0.26487	1	18616	18616		74.929	4.2135	1	39855000	+		42428	9138	20746	20835	49033	49033					0.07488143562670757
YAEKQTRR	8	Unmodified	_YAEKQTRR_					0	0	0		nc|ENSG00000117519|Q15417-3|CNN3;nc|ENSG00000117519|Q15417-2|CNN3;ENSG00000117519|ENST00000370206|CNN3	nc|ENSG00000117519|Q15417-3|CNN3	nc|ENSG00000117519|Q15417-3|CNN3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	525.7137939333916	2	526.285797	1050.55704	1.0929	0.00057518	4.1451	0.0021815	5.238	0.0027567	526.287534802353	22.71	0.14514	22.71	22.635	22.78	0					7	4	2	0	0	0	2.3239	1	9474	9474		8.5933	0.68312	1	583340			42429	2013	20747	20836	49034	49034					0.03378492906290376
YAEKSIWRK	9	Unmodified	_YAEKSIWRK_					0	0	0		tr|A0A553SR15|A0A553SR15_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00180PE=4SV=1	tr|A0A553SR15|A0A553SR15_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00180PE=4SV=1	tr|A0A553SR15|A0A553SR15_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_00180PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.1751891970634	3	394.220624	1179.64004	0.2564	0.00010108	1.1803	0.00046528	1.4367	0.00056636	394.220846299854	19.879	0.37453	20.938	20.825	21.2	1.0585					16	11	2	0	0	0	0.11901	1	8337	8337		1.0715	0	1	539680			42430	16539	20748	20837	49035	49035					0.05740809634266952
YAFAHILTV	9	Unmodified	_YAFAHILTV_					0	0	0		CIAO1-TMEM127|1|fusion;ENSG00000135956|ENST00000258439|TMEM127	CIAO1-TMEM127|1|fusion	CIAO1-TMEM127|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	517.7886840701103	2	517.78711	1033.55967	2.6827	0.0013891	0.84023	0.00043506	3.523	0.0018242	517.7873727355659	59.646	0.76983	61.066	60.497	61.267	1.4196					54	24	3	0	0	0	0.007512	2	25026	24978;25026		112.56	62.89	1	15778000			42431	307	20749	20838	49036;49037	49037					0.04422948311230357
YAFAHILTV	9	Unmodified	_YAFAHILTV_					0	0	0		CIAO1-TMEM127|1|fusion;ENSG00000135956|ENST00000258439|TMEM127	CIAO1-TMEM127|1|fusion	CIAO1-TMEM127|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7886840701103	2	517.78711	1033.55967	2.6901	0.0013929	0.78495	0.00040643	3.475	0.0017993	517.7872598520914	59.125	0.47093	61.094	60.844	61.315	1.969					42	14	4	0	0	0	0.00033321	2	24831	24779;24831		136.08	72.518	1	12530000			42432	307	20749	20838	49038;49039	49039					0.04422948311230357
YAFKIPLSI	9	Unmodified	_YAFKIPLSI_					0	0	0		nc|ENSG00000107731|Q8IZJ1-2|UNC5B;ENSG00000107731|ENST00000335350|UNC5B	nc|ENSG00000107731|Q8IZJ1-2|UNC5B	nc|ENSG00000107731|Q8IZJ1-2|UNC5B	MSMS	GG20161007_CRH_Patient100_W632_01	3	526.7976562380791	2	526.312961	1050.61137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.29	1	64.703	64.203	65.203	1.4134								0	0	0	0.40188	1	26543	26543		8.5933	0.68312	1				42433	1607	20750	20839	49040	49040					0.08808692005140983
YAFLHRTL	8	Unmodified	_YAFLHRTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7858459353447	2	510.784902	1019.55525	1.2031	0.0006145	0.63383	0.00032375	1.8369	0.00093825	510.78505966821547	29.589	0.36945	30.871	30.734	31.104	1.2825					29	11	3	0	0	0	0.30755	2	12430	12386;12430		71.134	9.7761	1	5846900			42434	4524;2367	20751	20840	49041;49042	49042					0.046254838883328375
YAFLHRTL	8	Unmodified	_YAFLHRTL_					0	0	0		nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000179750|ENST00000333467|APOBEC3B;nc|ENSG00000179750|Q9UH17-2|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	nc|ENSG00000179750|Q9UH17-3|APOBEC3B;ENSG00000128394|ENST00000308521|APOBEC3F	ENSG00000128394|ENST00000308521|APOBEC3F	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7861511111259	2	510.784902	1019.55525	1.1052	0.00056453	0.84969	0.00043401	1.9549	0.00099854	510.7852474051185	29.114	0.45495	30.912	30.657	31.112	1.7987					34	14	3	0	0	0	0.43377	3	12193	12142;12193;12245		52.268	8.4101	1	3625000			42435	4524;2367	20751	20840	49043;49044;49045	49044					0.046254838883328375
YAFNMKATV	9	Unmodified	_YAFNMKATV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.7639648318291	2	522.762778	1043.511	1.3048	0.0006821	0.47038	0.0002459	1.7752	0.000928	522.762925439899	38.004	0.32103	39.288	39.141	39.462	1.284					35	11	5	0	0	0	0.033102	2	15965	15923;15965		82.529	48.342	1	11011000			42436	1687	20752	20841	49046;49047	49047					-0.009012883201648947
YAFNMKATV	9	Unmodified	_YAFNMKATV_					0	0	0		ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	ENSG00000109971|ENST00000534624|HSPA8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.7630493044853	2	522.762778	1043.511	0.71488	0.00037371	0.15809	8.2642E-05	0.87296	0.00045635	522.7630189599196	37.365	0.37953	39.185	39.023	39.403	1.8202					41	14	5	0	0	0	0.037098	2	15653	15653;15703		78.728	38.771	1	3999500			42437	1687	20752	20841	49048;49049	49048					-0.009012883201648947
YAFPKAVSV	9	Unmodified	_YAFPKAVSV_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2752258181572	2	491.273835	980.533118	2.3655	0.0011621	-2.0278	-0.00099619	0.33768	0.0001659	491.272521355356	40.91	0.37576	42.235	42.054	42.43	1.3254					31	11	4	0	0	0	0.040497	3	17168	17119;17168;17213		75.761	37.787	1	6141500			42438	2965	20753	20842	49050;49051;49052	49051					0.04207259419899856
YAFPKAVSV	9	Unmodified	_YAFPKAVSV_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2734557986259	2	491.273835	980.533118	2.2601	0.0011103	-2.0733	-0.0010186	0.18675	9.1744E-05	491.2728702172151	40.562	0.31524	42.424	42.265	42.58	1.8624					25	9	3	0	0	0	0.040497	3	16974	16954;16974;17013		75.761	45.124	1	6275100			42439	2965	20753	20842	49053;49054;49055	49054					0.04207259419899856
YAFPKAVSVF	10	Unmodified	_YAFPKAVSVF_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.8104125857353	2	564.808042	1127.60153	2.5317	0.0014299	0.87231	0.00049269	3.404	0.0019226	564.8085951635856	59.218	0.3905	60.638	60.409	60.8	1.4196					36	12	4	0	0	0	0.078293	2	24812	24812;24860		67.838	35.052	1	10857000			42440	2965	20754	20843	49056;49057	49056					0.042835039997498825
YAFPKAVSVF	10	Unmodified	_YAFPKAVSVF_					0	0	0		ENSG00000141526|ENST00000582743|SLC16A3;ENST00000581642.1_1_17:80193878-80194172:+|nuORF;ENST00000584781.5_1_17:80193878-80195055:+|nuORF;ENST00000579572.1_1_17:80193878-80195110:+|nuORF	ENSG00000141526|ENST00000582743|SLC16A3	ENSG00000141526|ENST00000582743|SLC16A3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.8096801638603	2	564.808042	1127.60153	2.2419	0.0012663	0.60493	0.00034167	2.8468	0.0016079	564.8084363256417	58.719	0.42176	60.688	60.487	60.908	1.969					36	13	4	0	0	0	0.054878	3	24662	24618;24662;24722		76.825	40.698	1	9473500			42441	2965	20754	20843	49058;49059;49060	49059					0.042835039997498825
YAFPKSITV	9	Unmodified	_YAFPKSITV_					0	0	0		nc|ENSG00000155380|P53985-2|SLC16A1;ENSG00000155380|ENST00000369626|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2881347537041	2	513.286943	1024.55933	2.3761	0.0012196	-1.5868	-0.0008145	0.78927	0.00040512	513.2862430148315	46.892	1.1479	48.274	47.869	49.017	1.3825					94	35	4	0	0	0	0.019486	3	19589	19589;19636;19675		99.755	41.076	1	26779000			42442	3419	20755	20844	49061;49062;49063	49061					0.048035285913556436
YAFPKSITV	9	Unmodified	_YAFPKSITV_					0	0	0		nc|ENSG00000155380|P53985-2|SLC16A1;ENSG00000155380|ENST00000369626|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	513.2880737185478	2	513.286943	1024.55933	2.0713	0.0010632	-0.99609	-0.00051128	1.0752	0.00055188	513.2865258262956	46.419	0.98955	48.389	48.003	48.993	1.9703					83	31	4	0	0	0	0.0060384	3	19412	19412;19448;19487		118.07	53.832	1	28191000			42443	3419	20755	20844	49064;49065;49066	49064					0.048035285913556436
YAFPKSITVF	10	Unmodified	_YAFPKSITVF_					0	0	0		nc|ENSG00000155380|P53985-2|SLC16A1;ENSG00000155380|ENST00000369626|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.8223754763603	2	586.82115	1171.62775	2.2537	0.0013225	-0.34285	-0.00020119	1.9109	0.0011213	586.8209256140351	63.565	0.68677	64.979	64.753	65.44	1.4134					41	21	2	0	0	0	0.064034	3	26707	26654;26707;26760		72.968	43.886	1	11117000			42444	3419	20756	20845	49067;49068;49069	49068					0.0487977317120567
YAFPKSITVF	10	Unmodified	_YAFPKSITVF_					0	0	0		nc|ENSG00000155380|P53985-2|SLC16A1;ENSG00000155380|ENST00000369626|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	nc|ENSG00000155380|P53985-2|SLC16A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	586.8219482302666	2	586.82115	1171.62775	2.2499	0.0013203	-0.44117	-0.00025889	1.8087	0.0010614	586.8208520879681	63.004	0.72105	64.949	64.688	65.409	1.9444					40	22	2	0	0	0	0.048298	3	26442	26393;26442;26496		79.596	50.515	1	9038100			42445	3419	20756	20845	49070;49071;49072	49071					0.0487977317120567
YAFPLAHSL	9	Unmodified	_YAFPLAHSL_					0	0	0		nc|ENSG00000171100|Q13496-2|MTM1;ENSG00000171100|ENST00000370396|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7721740603447	2	509.77146	1017.52837	2.0395	0.0010397	0.55508	0.00028296	2.5946	0.0013227	509.7713789959684	54.544	0.88972	55.948	55.35	56.24	1.4048					50	28	2	0	0	0	0.0082953	2	22820	22820;22877		109.63	66.85	1	4615500			42446	4177	20757	20846	49073;49074	49073					0.0203037527712695
YAFPLAHSL	9	Unmodified	_YAFPLAHSL_					0	0	0		nc|ENSG00000171100|Q13496-2|MTM1;ENSG00000171100|ENST00000370396|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	nc|ENSG00000171100|Q13496-2|MTM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7718383669853	2	509.77146	1017.52837	1.6111	0.00082129	-0.50566	-0.00025777	1.1054	0.00056352	509.7710447511475	53.982	0.84827	55.952	55.471	56.319	1.9697					50	26	3	0	0	0	0.022807	2	22611	22611;22667		97.075	61.03	1	2874700			42447	4177	20757	20846	49075;49076	49075					0.0203037527712695
YAFPRVRII	9	Unmodified	_YAFPRVRII_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.8975402712822	3	378.897593	1133.67095	0.82316	0.00031189	0.1482	5.6153E-05	0.97136	0.00036805	378.8975783609743	49.078	1.2963	50.466	49.804	51.1	1.388					107	41	3	0	0	0	0.40005	4	20486	20486;20536;20585;20629		20.415	4.2654	1	9586300			42448	5047	20758	20847	49077;49078;49079;49080	49077					0.10946007739175911
YAFPRVRII	9	Unmodified	_YAFPRVRII_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.8456298708916	2	567.842751	1133.67095	1.6756	0.0009515	1.9475	0.0011058	3.6231	0.0020573	567.843610754463	49.13	0.68313	50.52	50.081	50.764	1.39					43	21	3	0	0	0	0.55689	2	20515	20515;20568		13.508	7.3021	1	1547500			42449	5047	20758	20847	49081;49082	49081					0.10946007739175911
YAFPRVRII	9	Unmodified	_YAFPRVRII_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.8977538943291	3	378.897593	1133.67095	1.774	0.00067218	-1.1041	-0.00041834	0.66994	0.00025384	378.89714746343907	48.553	1.1391	50.53	49.929	51.068	1.9772					92	36	3	0	0	0	0.28372	5	20304	20223;20263;20304;20354;20475		26.268	7.5469	1	9829400			42450	5047	20758	20847	49083;49084;49085;49086;49087	49085					0.10946007739175911
YAFPRVRII	9	Unmodified	_YAFPRVRII_					0	0	0		ENST00000358711.7_1_20:62571331-62572425:-|nuORF;nc|ENSG00000198276|Q9NWZ5-4|UCKL1;ENSG00000198276|ENST00000354216|UCKL1	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.8454467654228	2	567.842751	1133.67095	2.0502	0.0011642	0.82738	0.00046982	2.8775	0.001634	567.8430048862472	48.584	0.68087	50.562	50.206	50.886	1.9772					35	21	2	0	0	0	0.23535	2	20346	20277;20346		18.135	7.3111	1	1963700			42451	5047	20758	20847	49088;49089	49089					0.10946007739175911
YAFVIRRLP	9	Unmodified	_YAFVIRRLP_					0	0	0		nc|ENSG00000120903|Q15822-2|CHRNA2;ENSG00000120903|ENST00000407991|CHRNA2;nc|ENSG00000101204|P43681-2|CHRNA4;ENSG00000101204|ENST00000370263|CHRNA4	nc|ENSG00000120903|Q15822-2|CHRNA2	nc|ENSG00000120903|Q15822-2|CHRNA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	378.8983947634697	3	378.897593	1133.67095	0.82316	0.00031189	0.1482	5.6153E-05	0.97136	0.00036805	378.8975783609743	49.078	1.2963	50.466	49.804	51.1	1.388					107	41	3	0	0	0	0.59568	1	20697	20697		11.495	0	1	9586300			42452	2122	20759	20848	49090	49090					0.10946007739175911
YAFVIRRLP	9	Unmodified	_YAFVIRRLP_					0	0	0		nc|ENSG00000120903|Q15822-2|CHRNA2;ENSG00000120903|ENST00000407991|CHRNA2;nc|ENSG00000101204|P43681-2|CHRNA4;ENSG00000101204|ENST00000370263|CHRNA4	nc|ENSG00000120903|Q15822-2|CHRNA2	nc|ENSG00000120903|Q15822-2|CHRNA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	378.8981201052666	3	378.897593	1133.67095	1.774	0.00067218	-1.1041	-0.00041834	0.66994	0.00025384	378.89714746343907	48.553	1.1391	50.53	49.929	51.068	1.9772					92	36	3	0	0	0	0.59568	1	20412	20412		11.495	0	1	9829400			42453	2122	20759	20848	49091	49091					0.10946007739175911
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1351196169853	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.04	1	112.09	111.59	112.59	0.04554								0	0	0	1.0178	1	48300	48300		0.45834	0	1		+		42454	12652	20760	20849	49092	49092					-0.08731839528502405
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1353027224541	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.29	1	112.34	111.84	112.84	0.04554								0	0	0	1.0178	1	48401	48401		0.45834	0	1		+		42455	12652	20760	20849	49093	49093					-0.08731839528502405
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1352416872978	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.52	1	112.57	112.07	113.07	0.04554								0	0	0	1.0178	1	48493	48493		0.45834	0	1		+		42456	12652	20760	20849	49094	49094					-0.08731839528502405
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1345092654228	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	114.88	1	114.92	114.42	115.42	0.042839								0	0	0	1.0178	1	49440	49440		0.45834	0	1		+		42457	12652	20760	20849	49095	49095					-0.08731839528502405
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1346008181572	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	115.08	1	115.12	114.62	115.62	0.042839								0	0	0	1.0178	1	49518	49518		0.45834	0	1		+		42458	12652	20760	20849	49096	49096					-0.08731839528502405
YAHCHGPF	8	Unmodified	_YAHCHGPF_					0	0	0			REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	REV__ENST00000369774.8_3_10:105361047-105361260:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344787478447	3	311.134162	930.380657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	116.57	1	116.61	116.11	117.11	0.041039								0	0	0	1.0178	1	50118	50118		0.45834	0	1		+		42459	12652	20760	20849	49097	49097					-0.08731839528502405
YAHFPINVV	9	Unmodified	_YAHFPINVV_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	530.2850829958916	2	530.284734	1058.55492	0.86689	0.0004597	0.15908	8.4356E-05	1.026	0.00054406	530.2847082590765	52.806	0.53938	54.207	53.902	54.442	1.4005					39	16	3	0	0	0	0.098957	3	22082	22035;22082;22131		49.669	21.182	1	5117100			42460	3714;6545	20761	20850	49098;49099;49100	49099					0.027980641684507646
YAHFPINVV	9	Unmodified	_YAHFPINVV_					0	0	0		ENSG00000163682|ENST00000295955|RPL9;ENST00000511075.5_1_4:39457912-39460059:-|nuORF;ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENSG00000163682|ENST00000295955|RPL9;ENST00000439124.1_1_6:64325734-64326112:-|nuORF	ENSG00000163682|ENST00000295955|RPL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	530.2856933474541	2	530.284734	1058.55492	1.5623	0.00082844	-0.30206	-0.00016018	1.2602	0.00066826	530.2841554039753	52.166	0.52428	54.138	53.892	54.416	1.9722					40	16	3	0	0	0	0.13437	3	21836	21836;21884;21933		40.449	11.962	1	3505400			42461	3714;6545	20761	20850	49101;49102;49103	49101					0.027980641684507646
YAIGLVMRL	9	Unmodified	_YAIGLVMRL_					0	0	0		ENSG00000188921|ENST00000495827|HACD4;ENST00000488436.1_1_9:21017882-21026717:-|nuORF	ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	518.3145019412041	2	518.304613	1034.59467	1.8502	0.00095896	-0.85391	-0.00044258	0.99627	0.00051637	518.3042145266627	66.089	0.311	67.978	67.871	68.182	1.8889					17	9	2	0	0	0	0.066555	1	27692	27692		39.957	7.8404	1	8138700			42462	4886	20762	20851	49104	49104					0.07875867847542395
YAIIATIATV	10	Unmodified	_YAIIATIATV_					0	0	0			REV__nc|ENSG00000073464|P51793-2|CLCN4	REV__nc|ENSG00000073464|P51793-2|CLCN4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3091918826103	2	518.307875	1034.6012	2.1337	0.0011059	-1.5489	-0.00080282	0.58475	0.00030308	518.3071360205995	66.51	0.85248	67.898	67.269	68.121	1.3888					66	27	3	0	0	0	0.051733	2	27876	27876;27928		78.149	15.812	1	8803700	+		42463	8744	20763	20852	49105;49106	49105					0.08528084279896575
YAILGASLI	9	Unmodified	_YAILGASLI_					0	0	0			REV__tr|A0A7D6VTK5|A0A7D6VTK5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02845PE=4SV=1	REV__tr|A0A7D6VTK5|A0A7D6VTK5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_02845PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	460.7773620486259	2	460.776211	919.537869	2.496	0.0011501	-0.095268	-4.3897E-05	2.4008	0.0011062	460.7761363911497	44.279	0.73038	46.223	45.989	46.719	1.9438					50	22	3	0	0	0	0.033521	1	18540	18540		81.864	0.25097	1	39855000	+		42464	15490	20764	20853	49107	49107					0.07488143562670757
YAIREEIVL	9	Unmodified	_YAIREEIVL_					0	0	0		ENSG00000196961|ENST00000354293|AP2A1;nc|ENSG00000196961|O95782|AP2A1;ENST00000597774.5_1_19:50270412-50303272:+|nuORF	ENSG00000196961|ENST00000354293|AP2A1	ENSG00000196961|ENST00000354293|AP2A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3166992068291	2	553.316232	1104.61791	1.8157	0.0010047	-0.46234	-0.00025582	1.3534	0.00074884	553.3163189487226	49.382	0.74432	50.773	50.453	51.197	1.3911					51	23	3	0	0	0	0.12216	5	20643	20592;20643;20696;20746;20829		41.956	19.297	1	3349500			42465	4972	20765	20854	49108;49109;49110;49111;49112	49109					0.06978585165848017
YAIREEIVL	9	Unmodified	_YAIREEIVL_					0	0	0		ENSG00000196961|ENST00000354293|AP2A1;nc|ENSG00000196961|O95782|AP2A1;ENST00000597774.5_1_19:50270412-50303272:+|nuORF	ENSG00000196961|ENST00000354293|AP2A1	ENSG00000196961|ENST00000354293|AP2A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3168823122978	2	553.316232	1104.61791	1.7938	0.00099253	-0.93429	-0.00051696	0.8595	0.00047558	553.316203604001	48.74	0.70933	50.718	50.483	51.192	1.9772					54	22	3	0	0	0	0.12216	4	20384	20384;20434;20514;20569		41.956	21.502	1	4319200			42466	4972	20765	20854	49113;49114;49115;49116	49113					0.06978585165848017
YAITRVLRL	9	Unmodified	_YAITRVLRL_					0	0	0		ENST00000496418.5_1_3:132277817-132297733:-|nuORF;nc|ENSG00000240303|Q709F0-3|ACAD11;nc|ENSG00000240303|Q709F0-2|ACAD11;ENSG00000240303|ENST00000264990|ACAD11	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	ENST00000496418.5_1_3:132277817-132297733:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8473388552666	2	552.848033	1103.68151	1.9524	0.0010794	-2.1614	-0.0011949	-0.20902	-0.00011555	552.8469393278309	43.885	0.21383	45.239	45.071	45.284	1.3536					11	6	2	0	0	0	0.39927	1	18385	18385		20.454	7.4112	1	2417500			42467	5331	20766	20855	49117	49117					0.13381990393577325
YAKALEKGLP	10	Unmodified	_YAKALEKGLP_					0	0	0		nc|ENSG00000140254|Q1HG43-3|DUOXA1;ENSG00000140254|ENST00000560572|DUOXA1;nc|ENSG00000140254|Q1HG43-2|DUOXA1	nc|ENSG00000140254|Q1HG43-3|DUOXA1	nc|ENSG00000140254|Q1HG43-3|DUOXA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3173705935478	2	545.318774	1088.623	1.9408	0.0010584	-0.88856	-0.00048455	1.0523	0.00057382	545.3177353622264	69.319	1.4655	70.685	69.694	71.159	1.3657					70	47	2	0	0	0	0.81324	1	29040	29040		10.824	2.9138	1	2154700			42468	2903	20767	20856	49118	49118					0.08222889028479585
YAKLIAEL	8	Unmodified	_YAKLIAEL_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	460.7774230837822	2	460.776211	919.537869	2.8481	0.0013123	-0.020077	-9.2509E-06	2.828	0.0013031	460.77615114422565	44.921	0.54005	46.287	46.023	46.563	1.3653					41	16	3	0	0	0	0.072211	2	18843	18806;18843		96.285	17.557	1	47165000			42469	2270	20768	20857	49119;49120	49120					0.07488143562670757
YAKLIAEL	8	Unmodified	_YAKLIAEL_					0	0	0		ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	ENSG00000125676|ENST00000245838|THOC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	460.7772094607353	2	460.776211	919.537869	2.496	0.0011501	-0.095268	-4.3897E-05	2.4008	0.0011062	460.7761363911497	44.279	0.73038	46.223	45.989	46.719	1.9438					50	22	3	0	0	0	0.072211	1	18577	18577		96.285	21.356	1	39855000			42470	2270	20768	20857	49121	49121					0.07488143562670757
YAKLLRETL	9	Unmodified	_YAKLLRETL_					0	0	0			REV__tr|A0A7D6VT40|A0A7D6VT40_9CLOTDsbAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11695PE=4SV=1	REV__tr|A0A7D6VT40|A0A7D6VT40_9CLOTDsbAfamilyoxidoreductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_11695PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8315307497978	2	553.832049	1105.64954	1.5125	0.00083768	-2.8657	-0.0015871	-1.3532	-0.00074943	553.8300951413565	71.197	2.0584	73.021	72.154	74.212	1.824					182	66	3	0	0	0	0.75267	1	30297	30297		5.2307	0	1	5931400	+		42471	15472	20769	20858	49122	49122					0.10094577919812764
YAKMLAII	8	Unmodified	_YAKMLAII_					0	0	0			REV__ENSG00000204020|ENST00000404459|LIPN	REV__ENSG00000204020|ENST00000404459|LIPN	MSMS	GG20161007_CRH_Patient100_A02_02	2	308.1864196658134	3	308.185863	921.53576	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.18	1	103.24	102.74	103.74	0.059502								0	0	0	1.0178	1	43246	43246		0.45834	0	1		+		42472	11769	20770	20859	49123	49123					0.07185391553184672
YAKPYFLRL	9	Unmodified	_YAKPYFLRL_					0	0	0		SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant;SHQ1|p.M321Ifs*35|1|0.06|ENSG00000144736|chr3:72812768-72812769|-/T|frameshift_variant;ENSG00000144736|ENST00000325599|SHQ1	SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant	SHQ1|p.M321Tfs*24|1|0.06|ENSG00000144736|chr3:72812769-72812770|-/ATTGATTCCTG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2848693728447	3	390.893848	1169.65972	1.6044	0.00062717	0.81984	0.00032047	2.4243	0.00094764	390.89359231742765	45.409	0.45153	46.774	46.53	46.982	1.3653					18	13	2	0	0	0	0.11909	1	19041	19041		0.96228	0	1	664270			42473	3091	20771	20860	49124	49124					0.08167185645015707
YAKRNVKII	9	Unmodified	_YAKRNVKII_					0	0	0		tr|A0A7D6VUE0|A0A7D6VUE0_9CLOTTransketolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11230PE=4SV=1	tr|A0A7D6VUE0|A0A7D6VUE0_9CLOTTransketolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11230PE=4SV=1	tr|A0A7D6VUE0|A0A7D6VUE0_9CLOTTransketolasefamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11230PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.8499633669853	2	552.848033	1103.68151	1.8823	0.0010406	0.07413	4.0982E-05	1.9564	0.0010816	552.8477349411257	43.132	0.27285	45.067	44.943	45.216	1.9352					13	8	2	0	0	0	0.66839	1	18124	18124		8.5933	0	1	876680			42474	16948	20772	20861	49125	49125					0.13381990393600063
YAKSISFIT	9	Unmodified	_YAKSISFIT_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.2847778201103	2	515.2844	1028.55425	2.5673	0.0013229	-0.88411	-0.00045557	1.6832	0.00086734	515.283743174528	39.899	0.27541	41.209	41.055	41.33	1.3102					14	8	2	0	0	0	0.32838	1	16722	16722		24.021	0	1	867820	+		42475	11743	20773	20862	49126	49126					0.04111224728740126
YAKSISFIT	9	Unmodified	_YAKSISFIT_					0	0	0			REV__nc|ENSG00000198836|O60313-13|OPA1	REV__nc|ENSG00000198836|O60313-13|OPA1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	515.2844	1028.55425	2.5673	0.0013229	-0.88411	-0.00045557	1.6832	0.00086734	515.283743174528	39.899	0.27541	41.209	41.055	41.33	1.3102	-0.037728	-6.0382E-05	NaN	24.021	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	867820	+		42476	11743	20773	20862							0.04111224728740126
YALEDVKMLH	10	Unmodified	_YALEDVKMLH_					0	0	0		nc|ENSG00000182175|Q96B86-3|RGMA;ENSG00000182175|ENST00000329082|RGMA;nc|ENSG00000182175|Q96B86-4|RGMA	nc|ENSG00000182175|Q96B86-3|RGMA	nc|ENSG00000182175|Q96B86-3|RGMA	MSMS	GG20161007_CRH_Patient100_W632_02	4	406.8788024783134	3	406.877758	1217.61144	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.8549	1	10.6	10.1	11.1	0.74462								0	0	0	0.66155	1	4103	4103		0.77653	0	1				42477	4604	20774	20863	49127	49127					0.011343239428242669
YALIFPNWCAK	11	Unmodified	_YALIFPNWCAK_					0	0	0			REV__ENSG00000158169|ENST00000289081|FANCC	REV__ENSG00000158169|ENST00000289081|FANCC	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	442.5621826052666	3	442.561881	1324.66381	0.30689	0.00013582	0.039356	1.7417E-05	0.34624	0.00015323	442.8960510937673	15.651	0.21669	15.651	15.528	15.745	0					14	6	3	0	0	0	1.0156	1	6502	6502		2.8433	0.21205	1	660360	+		42478	10549	20775	20864	49128	49128					0.014469070764334901
YALIFPNWCAK	11	Unmodified	_YALIFPNWCAK_					0	0	0			REV__ENSG00000158169|ENST00000289081|FANCC	REV__ENSG00000158169|ENST00000289081|FANCC	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	442.561881	1324.66381	0.30689	0.00013582	0.039356	1.7417E-05	0.34624	0.00015323	442.8960510937673	15.651	0.21669	15.651	15.528	15.745	0	0.030268	0.00038782	NaN	2.8433	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	660360	+		42479	10549	20775	20864							0.014469070764334901
YALIFPNWCAK	11	Unmodified	_YALIFPNWCAK_					0	0	0			REV__ENSG00000158169|ENST00000289081|FANCC	REV__ENSG00000158169|ENST00000289081|FANCC	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	442.561881	1324.66381	0.81329	0.00035993	-0.76326	-0.00033779	0.050037	2.2145E-05	442.56165105218366	15.461	0.15661	15.591	15.494	15.65	0.13022	-0.030268	-0.00067779	NaN	2.8433	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	431410	+		42480	10549	20775	20864							0.014469070764334901
YALLSGIVSI	10	Unmodified	_YALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3146240115166	2	518.307875	1034.6012	2.1337	0.0011059	-1.5489	-0.00080282	0.58475	0.00030308	518.3071360205995	66.51	0.85248	67.898	67.269	68.121	1.3888					66	27	3	0	0	0	0.5476	1	27762	27762		25.399	1.3787	1	8803700			42481	4270	20776	20865	49129	49129					0.08528084279896575
YALLSGIVSI	10	Unmodified	_YALLSGIVSI_					0	0	0		ENST00000495589.5_1_1:155181271-155183486:+|nuORF;ENST00000440904.1_1_1:155200937-155204113:+|nuORF;nc|ENSG00000173171|Q13505-3|MTX1;ENST00000481771.5_1_1:155181647-155183486:+|nuORF;nc|ENSG00000173171|Q13505-2|MTX1;ENSG00000173171|ENST00000368376|MTX1	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	ENST00000495589.5_1_1:155181271-155183486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3054687380791	2	518.307875	1034.6012	1.8703	0.00096937	1.8006	0.00093326	3.6709	0.0019026	518.308618308976	65.759	0.64201	67.668	67.496	68.138	1.9085					40	20	3	0	0	0	0.32206	1	27563	27563		37.974	3.5723	1	9051900			42482	4270	20776	20865	49130	49130					0.08528084279896575
YALNNKRRV	9	Unmodified	_YALNNKRRV_					0	0	0		nc|ENSG00000091428|Q8WZA2-2|RAPGEF4;nc|ENSG00000091428|Q8WZA2-5|RAPGEF4;nc|ENSG00000091428|Q8WZA2-4|RAPGEF4;nc|ENSG00000091428|Q8WZA2-3|RAPGEF4;ENSG00000091428|ENST00000397081|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	nc|ENSG00000091428|Q8WZA2-2|RAPGEF4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3334228396416	2	567.330539	1132.64652	2.944	0.0016702	1.9534	0.0011082	4.8974	0.0027785	567.332196888685	74.244	0.7532	76.041	75.869	76.622	1.7962					58	23	3	0	0	0	0.76456	1	31195	31195		4.756	0.42677	1	1493700			42483	1150	20777	20866	49131	49131					0.08550747585650242
YALYCKFI	8	Unmodified	_YALYCKFI_					0	0	0			REV__ENSG00000215262|ENST00000399881|KCNU1	REV__ENSG00000215262|ENST00000399881|KCNU1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7592651247978	2	510.764789	1019.51502	2.824	0.0014424	-4.039	-0.002063	-1.215	-0.00062057	510.7612800723822	75.938	1.1847	77.232	76.361	77.546	1.2938					71	38	4	0	0	0	0.88587	1	31780	31780		5.2307	0	1	6728500	+		42484	11866	20778	20867	49132	49132					0.006048011735288128
YANQVDQLY	9	Unmodified	_YANQVDQLY_					0	0	0			REV__ZFYVE16|p.N81Kfs*13|1|0.11|ENSG00000039319|chr5:80436927-80436928|-/ATTGTCCCTGTTTGCAGATAACATGATTGTATAT|frameshift_variant	REV__ZFYVE16|p.N81Kfs*13|1|0.11|ENSG00000039319|chr5:80436927-80436928|-/ATTGTCCCTGTTTGCAGATAACATGATTGTATAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.2659789919853	2	557.264196	1112.51384	2.4541	0.0013676	0.1489	8.2979E-05	2.6031	0.0014506	557.2644480890377	59.068	0.28653	61.037	60.876	61.162	1.969					18	8	3	0	0	0	0.20671	2	24770	24770;24824		32.305	0	1	1396600	+		42485	8591	20779	20868	49133;49134	49133					-0.03791741661643755
YAQDEHLITF	10	Unmodified	_YAQDEHLITF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.7993041872978	2	618.798403	1235.58225	1.7073	0.0010565	-0.639	-0.00039541	1.0683	0.00066108	618.7977556439006	46.802	0.31895	48.185	48.027	48.346	1.3825					15	9	2	0	0	0	0.49886	1	19604	19604		27.629	6.0918	1	542110			42486	3062	20780	20869	49135	49135					-0.02611497081829839
YAQDEHLITF	10	Unmodified	_YAQDEHLITF_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.7990600466728	2	618.798403	1235.58225	1.2751	0.00078904	-0.54246	-0.00033567	0.73266	0.00045337	618.798249186265	46.36	0.34634	48.33	48.126	48.472	1.9703					15	10	2	0	0	0	0.63205	1	19420	19420		21.537	4.5947	1	1194400			42487	3062	20780	20869	49136	49136					-0.02611497081829839
YAQWYPIVV	9	Unmodified	_YAQWYPIVV_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8022949099541	2	569.800217	1137.58588	2.73	0.0015555	0.72018	0.00041036	3.4501	0.0019659	569.800806307259	78.507	0.74351	79.774	79.573	80.316	1.2668					42	23	4	0	0	0	0.09539	2	32939	32939;32986		50.855	30.401	1	3011600			42488	1449	20781	20870	49137;49138	49137					0.02259217482674103
YAQWYPIVV	9	Unmodified	_YAQWYPIVV_					0	0	0		TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant;nc|ENSG00000104067|Q07157-2|TJP1;nc|ENSG00000104067|Q07157|TJP1;ENSG00000104067|ENST00000614355|TJP1	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	TJP1|p.H1178Qfs*10|1|0.4|ENSG00000104067|chr15:29718592-29718608|TGGGCCCTGCTGAAGGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.8016845583916	2	569.800217	1137.58588	1.8832	0.001073	1.1898	0.00067792	3.073	0.001751	569.8012662044599	78.022	0.71561	79.774	79.59	80.305	1.7514					42	22	3	0	0	0	0.09539	2	32748	32699;32748		50.855	35.008	1	2137300			42489	1449	20781	20870	49139;49140	49140					0.02259217482674103
YAQYQASSFQ	10	Unmodified	_YAQYQASSFQ_					0	0	0		ENSG00000132510|ENST00000448097|KDM6B;nc|ENSG00000132510|O15054-1|KDM6B;nc|ENSG00000183878|O14607-2|UTY;KDM6A|p.R1054Efs*29|1|0.43|ENSG00000147050|chrX:45082586-45082586|A/-|frameshift_variant;nc|ENSG00000183878|O14607-5|UTY;nc|ENSG00000183878|O14607-3|UTY;nc|ENSG00000183878|O14607|UTY;nc|ENSG00000183878|O14607-4|UTY;nc|ENSG00000147050|O15550|KDM6A;ENSG00000183878|ENST00000545955|UTY;ENSG00000147050|ENST00000611820|KDM6A	ENSG00000132510|ENST00000448097|KDM6B	ENSG00000132510|ENST00000448097|KDM6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	596.7673828005791	2	596.767103	1191.51965	0.88518	0.00052825	-1.1531	-0.00068812	-0.2679	-0.00015987	596.7668028927353	51.568	0.51415	52.965	52.776	53.29	1.3966					29	17	2	0	0	0	0.77604	1	21572	21572		14.838	2.5976	1	3784900			42490	2536	20782	20871	49141	49141					-0.06844643149997864
YAREYDQDI	9	Unmodified	_YAREYDQDI_					0	0	0			REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	REV__nc|ENSG00000119139|Q9UDY2-5|TJP2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2844726443291	3	391.512132	1171.51457	1.901	0.00074425	-1.7569	-0.00068785	0.14406	5.6401E-05	391.5115626157863	78.333	0.18583	80.068	79.948	80.133	1.735					8	5	2	0	0	0	0.11901	1	32828	32828		1.0715	1.0715	1	222830	+		42491	9532	20783	20872	49142	49142					-0.06432947012604018
YARYALVL	8	Unmodified	_YARYALVL_					0	0	0			REV__tr|A0A553SRS8|A0A553SRS8_NIACINa(+)/H(+)antiportersubunitCOS=NialliacirculansOX=1397GN=CEQ21_01810PE=3SV=1	REV__tr|A0A553SRS8|A0A553SRS8_NIACINa(+)/H(+)antiportersubunitCOS=NialliacirculansOX=1397GN=CEQ21_01810PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	484.7848998904228	2	484.781828	967.549102	2.3399	0.0011343	0.37033	0.00017953	2.7102	0.0013139	484.7836029867262	47.215	0.73461	48.597	48.283	49.017	1.3825					41	22	3	0	0	0	0.68174	1	19814	19814		32.117	0	1	1473900	+		42492	15172	20784	20873	49143	49143					0.06402965656786819
YASDTDIEDP	10	Unmodified	_YASDTDIEDP_					0	0	0			REV__nc|ENSG00000129204|P35125-2|USP6	REV__nc|ENSG00000129204|P35125-2|USP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	375.8253356814384	3	375.824264	1124.45096	1.9383	0.00072847	1.4706	0.0005527	3.409	0.0012812	375.82476259306367	79.065	0.43758	80.331	80.066	80.504	1.2668					34	13	4	0	0	0	0.81324	1	33197	33197		6.1918	0.40842	1	3932100	+		42493	9749	20785	20874	49144	49144					-0.10628352240360073
YASDTDIEDP	10	Unmodified	_YASDTDIEDP_					0	0	0			REV__nc|ENSG00000129204|P35125-2|USP6	REV__nc|ENSG00000129204|P35125-2|USP6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	376.2334167361259	3	375.824264	1124.45096	2.0309	0.00076324	0.51931	0.00019517	2.5502	0.00095841	375.82447974597915	78.586	0.40533	80.321	80.101	80.506	1.735					32	12	3	0	0	0	0.12559	1	33024	33024		0.77653	0	1	2608100	+		42494	9749	20785	20874	49145	49145					-0.10628352240360073
YASDVQLIL	9	Unmodified	_YASDVQLIL_					0	0	0		ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8;RASSF8|p.R78Q|1|0.08|ENSG00000123094|chr12:26064627-26064627|G/A|missense_variant	ENSG00000123094|ENST00000689635|RASSF8	ENSG00000123094|ENST00000689635|RASSF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1021.559741199017	1	1021.55644	1020.54916	1.3776	0.0014073	1.2095	0.0012356	2.5871	0.0026429	1021.5562557642551	66.233	0.27485	67.622	67.507	67.782	1.3888					14	8	2	0	0	0	0.083604	2	27816	27748;27816		54.774	14.816	1	2161800			42495	2179	20786	20875	49146;49147	49147					0.03970920866152028
YASDVQLIL	9	Unmodified	_YASDVQLIL_					0	0	0		ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8;RASSF8|p.R78Q|1|0.08|ENSG00000123094|chr12:26064627-26064627|G/A|missense_variant	ENSG00000123094|ENST00000689635|RASSF8	ENSG00000123094|ENST00000689635|RASSF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	511.2831909060478	2	511.281857	1020.54916	2.3293	0.0011909	0.52744	0.00026967	2.8567	0.0014606	511.2815369212963	66.249	0.36378	67.638	67.418	67.782	1.3887					29	11	3	0	0	0	0.051699	1	27786	27786		67.344	29.37	1	3629900			42496	2179	20786	20875	49148	49148					0.03970920866152028
YASDVQLIL	9	Unmodified	_YASDVQLIL_					0	0	0		ENSG00000123094|ENST00000689635|RASSF8;nc|ENSG00000123094|Q8NHQ8-2|RASSF8;RASSF8|p.R78Q|1|0.08|ENSG00000123094|chr12:26064627-26064627|G/A|missense_variant	ENSG00000123094|ENST00000689635|RASSF8	ENSG00000123094|ENST00000689635|RASSF8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2821838259697	2	511.281857	1020.54916	2.1201	0.001084	-0.63519	-0.00032476	1.4849	0.00075921	511.2810730283078	65.779	0.42442	67.688	67.466	67.891	1.9085					37	13	3	0	0	0	0.051699	1	27591	27591		67.344	27.387	1	5750300			42497	2179	20786	20875	49149	49149					0.03970920866152028
YASLLGGVF	9	Unmodified	_YASLLGGVF_					0	0	0			REV__nc|ENSG00000111885|P33908-2|MAN1A1	REV__nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	463.7541076540947	2	463.752736	925.490919	2.8358	0.0013151	-0.36094	-0.00016739	2.4749	0.0011477	463.752855867921	69.875	0.34528	71.229	70.99	71.336	1.3536					23	10	3	0	0	0	0.41943	1	29339	29339		19.439	0	1	3656300	+		42498	9347	20787	20876	49150	49150					0.025192840115323634
YASLLGGVF	9	Unmodified	_YASLLGGVF_					0	0	0			REV__nc|ENSG00000111885|P33908-2|MAN1A1	REV__nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	463.7534667849541	2	463.752736	925.490919	2.2322	0.0010352	-0.53227	-0.00024684	1.6999	0.00078833	463.7525819052277	69.3	0.34649	71.153	71.009	71.356	1.853					23	10	3	0	0	0	0.41943	1	29087	29087		19.439	0	1	2022000	+		42499	9347	20787	20876	49151	49151					0.025192840115323634
YASLLGGVF	9	Unmodified	_YASLLGGVF_					0	0	0			REV__nc|ENSG00000111885|P33908-2|MAN1A1	REV__nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	463.752736	925.490919	2.8358	0.0013151	-0.36094	-0.00016739	2.4749	0.0011477	463.752855867921	69.875	0.34528	71.229	70.99	71.336	1.3536	0.037856	5.1125E-05	NaN	19.439	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3656300	+		42500	9347	20787	20876							0.025192840115323634
YASLLGGVF	9	Unmodified	_YASLLGGVF_					0	0	0			REV__nc|ENSG00000111885|P33908-2|MAN1A1	REV__nc|ENSG00000111885|P33908-2|MAN1A1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	463.752736	925.490919	2.2322	0.0010352	-0.53227	-0.00024684	1.6999	0.00078833	463.7525819052277	69.3	0.34649	71.153	71.009	71.356	1.853	-0.037856	-0.00010778	NaN	19.439	23	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2022000	+		42501	9347	20787	20876							0.025192840115323634
YASWRLFQFHR	11	Unmodified	_YASWRLFQFHR_					0	0	0			REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	378.4478332400322	4	378.448014	1509.76295	0.033471	1.2667E-05	-1.1955	-0.00045244	-1.162	-0.00043977	378.44760383982884	11.7	0.30989	11.789	11.619	11.929	0.089381					20	9	4	0	0	0	0.98455	1	4852	4852		4.7159	0.59929	1	2956500	+		42502	8652	20788	20877	49152	49152					0.028460660855216702
YASWRLFQFHR	11	Unmodified	_YASWRLFQFHR_					0	0	0			REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		4	378.448014	1509.76295	0.033471	1.2667E-05	-1.1955	-0.00045244	-1.162	-0.00043977	378.44760383982884	11.7	0.30989	11.789	11.619	11.929	0.089381	0.020338	-0.00032704	NaN	4.7159	20	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2956500	+		42503	8652	20788	20877							0.028460660855216702
YASWRLFQFHR	11	Unmodified	_YASWRLFQFHR_					0	0	0			REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	REV__ENST00000465525.6_1_1:29647190-29652170:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		4	378.448014	1509.76295	-0.22855	-8.6495E-05	-1.2617	-0.00047747	-1.4902	-0.00056396	378.447524194701	10.92	0.29379	11.681	11.56	11.853	0.76165	-0.087659	-0.00042716	NaN	4.7159	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	662080	+		42504	8652	20788	20877							0.028460660855216702
YASYAALIY	9	Unmodified	_YASYAALIY_					0	0	0		nc|ENSG00000145757|Q9BWV2-2|SPATA9;ENSG00000145757|ENST00000274432|SPATA9	nc|ENSG00000145757|Q9BWV2-2|SPATA9	nc|ENSG00000145757|Q9BWV2-2|SPATA9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7626830935478	2	517.7633	1033.51205	1.3534	0.00070073	-3.1871	-0.0016502	-1.8338	-0.00094945	517.7617585200549	67.236	0.58339	69.125	68.797	69.381	1.8889					47	18	3	0	0	0	0.15478	3	28172	28172;28224;28277		38.151	11.268	1	22139000			42505	3123	20789	20878	49153;49154;49155	49153					-0.0033675067961667082
YATFIVTNY	9	Unmodified	_YATFIVTNY_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	546.2758666872978	2	546.274032	1090.53351	2.3134	0.0012637	0.50659	0.00027674	2.82	0.0015405	546.2745402902532	59.519	0.43877	60.938	60.738	61.176	1.4196					40	13	4	0	0	0	0.0075027	3	25000	24912;24961;25000		112.59	66.572	1	14372000			42506	3358	20790	20879	49156;49157;49158	49158					-0.008133656509016873
YATFIVTNY	9	Unmodified	_YATFIVTNY_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1091.541064441204	1	1091.54079	1090.53351	2.1275	0.0023223	0.08368	9.134E-05	2.2112	0.0024136	1091.5404717457345	59.54	0.40791	60.96	60.738	61.146	1.4196					39	12	4	0	0	0	0.033794	2	24931	24931;24979		81.613	24.142	1	5053000			42507	3358	20790	20879	49159;49160	49159					-0.008133656509016873
YATFIVTNY	9	Unmodified	_YATFIVTNY_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.2755615115166	2	546.274032	1090.53351	2.4957	0.0013633	0.72996	0.00039876	3.2256	0.0017621	546.2745618382953	59.113	0.47202	61.082	60.814	61.286	1.969					38	14	3	0	0	0	0.0075027	3	24742	24742;24792;24834		112.59	66.572	1	14180000			42508	3358	20790	20879	49161;49162;49163	49161					-0.008133656509016873
YATFIVTNY	9	Unmodified	_YATFIVTNY_					0	0	0		ENST00000575002.5_1_16:4517092-4524613:-|nuORF;ENSG00000153406|ENST00000283429|NMRAL1	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	ENST00000575002.5_1_16:4517092-4524613:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1091.543261706829	1	1091.54079	1090.53351	2.6919	0.0029384	-0.22188	-0.00024219	2.4701	0.0026962	1091.5408294928136	59.073	0.44211	61.042	60.814	61.256	1.969					33	13	3	0	0	0	0.026628	2	24780	24780;24837		92.822	35.351	1	5605400			42509	3358	20790	20879	49164;49165	49164					-0.008133656509016873
YATGLLKQL	9	Unmodified	_YATGLLKQL_					0	0	0		PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant;PLXNA3|p.L1776Rfs*78|1|0.25|ENSG00000130827|chrX:154471271-154471275|CTGCT/-|frameshift_variant;ENSG00000130827|ENST00000369682|PLXNA3	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.8017455935478	2	503.800217	1005.58588	2.1485	0.0010824	0.84098	0.00042368	2.9895	0.0015061	503.8004276141389	43.681	0.42639	45.035	44.795	45.222	1.3536					24	13	2	0	0	0	2.9088E-05	2	18301	18301;18350		198.25	101.97	1	5734000			42510	2466	20791	20880	49166;49167	49166					0.08331217482702868
YATGLLKQL	9	Unmodified	_YATGLLKQL_					0	0	0		PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant;PLXNA3|p.L1776Rfs*78|1|0.25|ENSG00000130827|chrX:154471271-154471275|CTGCT/-|frameshift_variant;ENSG00000130827|ENST00000369682|PLXNA3	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	PLXNA3|p.I1452Rfs*8|1|0.29|ENSG00000130827|chrX:154468890-154468902|TTGATGCCATCAC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	503.8008605837822	2	503.800217	1005.58588	1.7609	0.00088716	0.69639	0.00035084	2.4573	0.001238	503.8004930599203	43.05	0.39149	44.971	44.751	45.142	1.9211					32	12	3	0	0	0	0.0061207	1	18026	18026		144.35	76.27	1	4744300			42511	2466	20791	20880	49168	49168					0.08331217482702868
YATISLLTV	9	Unmodified	_YATISLLTV_					0	0	0		nc|ENSG00000211891|P01854|IGHE;nc|ENSG00000211891|P01854-1|IGHE;nc|ENSG00000211891|P01854-3|IGHE	nc|ENSG00000211891|P01854|IGHE	nc|ENSG00000211891|P01854|IGHE	MSMS	GG20161007_CRH_Patient100_A02_01	1	490.7877075076103	2	490.786776	979.558998	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.534	1	96.534	96.034	97.034	0								0	0	0	0.061573	1	40352	40352		42.095	0	1				42512	7993	20792	20881	49169	49169					0.06840108871506345
YATTTSFDY	9	Unmodified	_YATTTSFDY_					0	0	0		tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	356.8235961794853	3	356.822195	1067.44476	0.69319	0.00024734	-0.84136	-0.00030021	-0.14817	-5.2871E-05	356.82327195053136	67.732	0.67023	69.11	68.789	69.459	1.3778					95	21	6	0	0	0	0.66458	2	28434	28356;28434		8.7454	1.9637	1	17179000			42513	16619	20793	20882	49170;49171	49171					-0.08626825681221817
YATTTSFDY	9	Unmodified	_YATTTSFDY_					0	0	0		tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	tr|A0A553SSK9|A0A553SSK9_NIACISrtBfamilysortaseOS=NialliacirculansOX=1397GN=srtBPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	356.8234435915947	3	356.822195	1067.44476	0.80486	0.00028719	-0.57589	-0.00020549	0.22896	8.1699E-05	356.82300385145646	67.236	0.64828	69.125	68.797	69.446	1.8889					63	20	4	0	0	0	0.67936	1	28236	28236		8.1555	0.8663	1	13403000			42514	16619	20793	20882	49172	49172					-0.08626825681221817
YAVDRAITH	9	Unmodified	_YAVDRAITH_					0	0	0		ENSG00000104824|ENST00000221419|HNRNPL;nc|ENSG00000104824|P14866-2|HNRNPL;ENST00000601664.1_1_19:39329532-39330816:-|nuORF;ENST00000595443.5_1_19:39327988-39329682:-|nuORF;ENST00000595164.5_1_19:39327364-39331218:-|nuORF;ENST00000597731.1_1_19:39327364-39331218:-|nuORF	ENSG00000104824|ENST00000221419|HNRNPL	ENSG00000104824|ENST00000221419|HNRNPL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	349.1850158572197	3	349.185691	1044.53524	-0.24665	-8.6126E-05	-2.0371	-0.00071131	-2.2837	-0.00079744	349.18493305141254	14.829	0.18556	15.725	15.651	15.837	0.89664					9	5	3	0	0	0	0.25667	1	6150	6150		26.021	3.3626	1	805040			42515	1478	20794	20883	49173	49173					0.014756881576886371
YAVERAVTH	9	Unmodified	_YAVERAVTH_					0	0	0		nc|ENSG00000143889|Q8WVV9-5|HNRNPLL;nc|ENSG00000143889|Q8WVV9-4|HNRNPLL;ENSG00000143889|ENST00000449105|HNRNPLL	nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	nc|ENSG00000143889|Q8WVV9-5|HNRNPLL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	349.1847106814384	3	349.185691	1044.53524	-1.1233	-0.00039226	-0.7488	-0.00026147	-1.8721	-0.00065373	349.1855734912579	14.891	0.15561	15.66	15.55	15.705	0.76937					9	4	3	0	0	0	0.22154	1	6195	6195		22.658	0	1	820470			42516	3056	20795	20884	49174	49174					0.014756881576886371
YAVPIINQK	9	Unmodified	_YAVPIINQK_					0	0	0		ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	ENSG00000197892|ENST00000524189|KIF13B	MSMS	GG20161007_CRH_Patient100_A02_02	2	523.3095580935478	2	523.305667	1044.59678	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.005	1	58.328	57.828	58.828	0.32298								0	0	0	0.317	1	24316	24316		16.942	3.0362	1				42517	5028	20796	20885	49175	49175					0.0762661985700106
YAVWYNKIVKR	11	Unmodified	_YAVWYNKIVKR_					0	0	0			REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.9435912966728	3	480.610111	1438.8085	1.9168	0.00092125	-2.247	-0.0010799	-0.33014	-0.00015867	480.9433148492038	39.01	3.7712	39.01	38.582	42.353	0					205	123	2	0	0	0	0.93873	4	16291	16291;16616;16676;17362		7.4771	3.5011	1	2342100	+		42518	15848	20797	20886	49176;49177;49178;49179	49176					0.10665291547888955
YAVWYNKIVKR	11	Unmodified	_YAVWYNKIVKR_					0	0	0			REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6088134646416	3	480.610111	1438.8085	2.1943	0.0010546	-3.1115	-0.0014954	-0.91718	-0.00044081	480.6086123198458	46.914	0.76758	46.914	46.509	47.277	0					30	24	2	0	0	0	1.0191	1	19682	19682		2.6312	1.4164	1	654030	+		42519	15848	20797	20886	49180	49180					0.10665291547888955
YAVWYNKIVKR	11	Unmodified	_YAVWYNKIVKR_					0	0	0			REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6084472537041	3	480.610111	1438.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	38.466	1	38.466	37.966	38.966	0								0	0	0	0.63775	1	16124	16124		4.7159	0.87001	1		+		42520	15848	20797	20886	49181	49181					0.10665291547888955
YAVWYNKIVKR	11	Unmodified	_YAVWYNKIVKR_					0	0	0			REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6107055544853	3	480.610111	1438.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	43.347	1	43.347	42.847	43.847	0								0	0	0	0.63775	1	18147	18147		1.3296	0.11481	1		+		42521	15848	20797	20886	49182	49182					0.10665291547888955
YAVWYNKIVKR	11	Unmodified	_YAVWYNKIVKR_					0	0	0			REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	REV__tr|A0A7D7A298|A0A7D7A298_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_07585PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	480.6100036501884	3	480.610111	1438.8085	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.356	1	49.356	48.856	49.856	0								0	0	0	0.63775	1	20605	20605		2.6312	0.54727	1		+		42522	15848	20797	20886	49183	49183					0.10665291547888955
YAWFWNDR	8	Unmodified	_YAWFWNDR_					0	0	0		SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	387.1505004763603	3	386.510286	1156.50903	0.23773	9.1883E-05	-1.181	-0.00045647	-0.94327	-0.00036458	386.5113705837766	14.143	1.0602	14.256	13.698	14.758	0.11295					55	33	2	0	0	0	2.3239	1	5749	5749		3.2813	2.2098	1	688650			42523	15955	20798	20887	49184	49184					-0.06296581013771174
YAWFWNDR	8	Unmodified	_YAWFWNDR_					0	0	0		SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	SIGLEC1|p.F1479Y|1|0.09|ENSG00000088827|chr20:3691495-3691495|A/T|missense_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	386.510286	1156.50903	-0.69147	-0.00026726	-2.7933	-0.0010796	-3.4848	-0.0013469	386.50962477470944	13.832	0.66493	14.559	14.224	14.889	0.72639	0.15141	-0.0010303	NaN	3.2813	26	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	387390			42524	15955	20798	20887							-0.06296581013771174
YAYDGKDYLAL	11	Unmodified	_YAYDGKDYLAL_					0	0	0		nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;ENSG00000204632|ENST00000360323|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	646.3154785037041	2	646.313886	1290.61322	1.978	0.0012784	0.37779	0.00024417	2.3558	0.0015226	646.3140275728161	47.329	0.35347	48.711	48.536	48.89	1.3825					34	10	4	0	0	0	0.026793	3	19831	19785;19831;19877		89.609	0	1	6221800			42525	5157	20799	20888	49185;49186;49187	49186					-0.020463437675516616
YAYDGKDYLAL	11	Unmodified	_YAYDGKDYLAL_					0	0	0		nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;ENSG00000204632|ENST00000360323|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	646.3146850466728	2	646.313886	1290.61322	2.0906	0.0013512	-0.32257	-0.00020848	1.7681	0.0011427	646.313657140186	46.882	0.37821	48.858	48.685	49.063	1.976					33	11	4	0	0	0	0.059274	2	19664	19617;19664		64.692	0	1	4927600			42526	5157	20799	20888	49188;49189	49189					-0.020463437675516616
YAYDGKDYLAL	11	Unmodified	_YAYDGKDYLAL_					0	0	0		nc|ENSG00000204632|P17693-4|HLA-G;nc|ENSG00000204632|P17693-5|HLA-G;ENSG00000204632|ENST00000360323|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	nc|ENSG00000204632|P17693-4|HLA-G	MSMS	GG20161007_CRH_Patient100_W632_02	4	646.3140746951103	2	646.313886	1290.61322	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.057	1	49.033	48.533	49.533	1.976								0	0	0	0.63767	1	19708	19708		15.248	0	1				42527	5157	20799	20888	49190	49190					-0.020463437675516616
YAYEGNDSI	9	Unmodified	_YAYEGNDSI_					0	0	0		ENSG00000113100|ENST00000231021|CDH9;ENST00000503958.1_1_5:24487774-24493064:-|nuORF;ENST00000505020.1_1_5:26881247-26890759:-|nuORF;ENSG00000040731|ENST00000264463|CDH10	ENSG00000113100|ENST00000231021|CDH9	ENSG00000113100|ENST00000231021|CDH9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.2192870974541	2	516.219454	1030.42436	3.2195	0.001662	-1.562	-0.00080634	1.6575	0.00085564	516.2178422965823	73.93	0.36642	75.726	75.471	75.838	1.7962					29	11	4	0	0	0	0.54523	1	31026	31026		13.508	0.97634	1	1384600			42528	1806	20800	20889	49191	49191					-0.08963996341026359
YAYLYIRML	9	Unmodified	_YAYLYIRML_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.3235351443291	2	603.323002	1204.63145	2.1829	0.001317	-2.1942	-0.0013238	-0.01134	-6.8417E-06	603.3220664703672	69.381	1.0636	70.746	70.501	71.565	1.3657					78	34	4	0	0	0	0.0082953	3	29090	29090;29135;29189		109.63	61.283	1	26922000			42529	3062	20801	20890	49192;49193;49194	49192					0.03732119673441048
YAYLYIRML	9	Unmodified	_YAYLYIRML_					0	0	0		SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant;ENSG00000144028|ENST00000323853|SNRNP200;SNRNP200|p.D1323Lfs*87|1|0.04|ENSG00000144028|chr2:96286347-96286348|-/AG|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	SNRNP200|p.W2065Gfs*3|1|0.07|ENSG00000144028|chr2:96275331-96275331|A/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.3228027224541	2	603.323002	1204.63145	1.4633	0.00088283	-1.6286	-0.00098258	-0.16533	-9.9749E-05	603.3223098406961	68.81	0.82336	70.663	70.439	71.262	1.853					74	26	5	0	0	0	0.0045981	3	28871	28827;28871;28929		123.1	65.625	1	25217000			42530	3062	20801	20890	49195;49196;49197	49196					0.03732119673441048
YAYPGVLLI	9	Unmodified	_YAYPGVLLI_					0	0	0		ENST00000478010.1_1_22:41904038-41912046:+|nuORF;ENSG00000100412|ENST00000216254|ACO2	ENST00000478010.1_1_22:41904038-41912046:+|nuORF	ENST00000478010.1_1_22:41904038-41912046:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1008.579882800579	1	1008.57645	1007.56917	4.021	0.0040555	-0.087057	-8.7804E-05	3.9339	0.0039677	1008.5758585035015	81.85	0.31393	83.52	83.357	83.671	1.67					18	9	3	0	0	0	0.16975	2	34312	34312;34363		36.466	11.792	1	1590400			42531	1276	20802	20891	49198;49199	49198					0.06568716596768809
YAYRDAVFL	9	Unmodified	_YAYRDAVFL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000528147.1_1_17:45258889-45266538:-|nuORF;CDC27|p.P272Sfs*8|1|0.05|ENSG00000004897|chr17:47156941-47156942|-/GA|frameshift_variant;ENST00000525495.6_2_17:45219385-45266538:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.2881957888603	2	559.287474	1116.5604	2.0188	0.0011291	0.25475	0.00014248	2.2735	0.0012715	559.2874906357549	47.988	0.37401	49.376	49.178	49.552	1.388					27	11	3	0	0	0	0.18337	1	20094	20094		34.932	13.185	1	2360200			42532	476	20803	20892	49200	49200					0.0067774296028346726
YAYRDAVFL	9	Unmodified	_YAYRDAVFL_					0	0	0		ENSG00000004897|ENST00000066544|CDC27;nc|ENSG00000004897|P30260-2|CDC27;ENST00000528147.1_1_17:45258889-45266538:-|nuORF;CDC27|p.P272Sfs*8|1|0.05|ENSG00000004897|chr17:47156941-47156942|-/GA|frameshift_variant;ENST00000525495.6_2_17:45219385-45266538:-|nuORF	ENSG00000004897|ENST00000066544|CDC27	ENSG00000004897|ENST00000066544|CDC27	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	559.287474	1116.5604	2.5859	0.0014463	1.5616	0.0008734	4.1475	0.0023197	559.2882424145365	47.499	0.43235	49.475	49.217	49.649	1.976	0.049496	0.0010218	NaN	34.932	30	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2561500			42533	476	20803	20892							0.0067774296028346726
YAYTGKLTL	9	Unmodified	_YAYTGKLTL_					0	0	0		ENSG00000124743|ENST00000370905|KLHL31	ENSG00000124743|ENST00000370905|KLHL31	ENSG00000124743|ENST00000370905|KLHL31	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	515.2870971560478	2	515.2844	1028.55425	1.8843	0.00097095	-0.57058	-0.00029401	1.3137	0.00067694	515.2844617330222	39.448	0.27699	41.285	41.16	41.437	1.8366					12	8	2	0	0	0	0.46566	1	16541	16541		17.113	4.5813	1	671030			42534	2240	20804	20893	49201	49201					0.041112247287628634
YAYTGRLEL	9	Unmodified	_YAYTGRLEL_					0	0	0		nc|ENSG00000109790|Q96PQ7-5|KLHL5;nc|ENSG00000109790|Q96PQ7-4|KLHL5;ENSG00000109790|ENST00000504108|KLHL5;nc|ENSG00000109790|Q96PQ7|KLHL5;nc|ENSG00000109790|Q96PQ7-2|KLHL5;nc|ENSG00000109790|Q96PQ7-3|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	nc|ENSG00000109790|Q96PQ7-5|KLHL5	MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2841674685478	2	543.284931	1084.55531	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.349	1	43.242	42.742	43.742	1.8927								0	0	0	0.31526	1	17328	17328		17.113	1.3447	1				42535	1678	20805	20894	49202	49202					0.016414390976706272
YCAAAEAP	8	Unmodified	_YCAAAEAP_					0	0	0			REV__COL4A5|p.G21E|1|0.29|ENSG00000188153|chrX:108440187-108440187|G/A|missense_variant	REV__COL4A5|p.G21E|1|0.29|ENSG00000188153|chrX:108440187-108440187|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	795.3345214724541	1	795.334166	794.32689	2.8804	0.0022909	-2.6101	-0.0020759	0.27037	0.00021503	795.3317247553452	103.44	0.14917	103.63	103.51	103.66	0.18066					17	6	4	0	0	0	0.89008	1	43549	43549		2.5775	0	1	101200000	+		42536	8367	20806	20895	49203	49203					-0.07850056750885415
YCAPEVGA	8	Unmodified	_YCAPEVGA_					0	0	0		nc|ENSG00000136643|Q96S38-2|RPS6KC1;ENSG00000136643|ENST00000366960|RPS6KC1	nc|ENSG00000136643|Q96S38-2|RPS6KC1	nc|ENSG00000136643|Q96S38-2|RPS6KC1	MSMS	GG20161007_CRH_Patient100_A02_01	1	405.1790649294853	2	405.178546	808.34254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3735	1	4.3735	3.8735	4.8735	0								0	0	0	1.0178	1	1797	1797		0.79363	0	1				42537	2732	20807	20896	49204	49204					-0.06929770233830368
YCEELSEFGVT	11	Unmodified	_YCEELSEFGVT_					0	0	0			REV__ENST00000533297.1_1_11:111896132-111933256:+|nuORF	REV__ENST00000533297.1_1_11:111896132-111933256:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	426.1830932497978	3	426.184916	1275.53292	0.56308	0.00023998	-3.6283	-0.0015463	-3.0652	-0.0013063	426.1829399614016	23.142	0.27631	24.793	24.624	24.9	1.6511					14	8	2	0	0	0	1.0084	1	9672	9672		1.3296	0	1	1074000	+		42538	10389	20808	20897	49205	49205					-0.09382573152925033
YCFKKKKKRK	10	Unmodified	_YCFKKKKKRK_					0	0	0			REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	REV__nc|ENSG00000168594|Q9UKF5-2|ADAM29	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	452.9493286013603	3	452.94807	1355.82238	3.2895	0.00149	-0.55235	-0.00025018	2.7372	0.0012398	452.94779924096184	96.665	0.27547	96.77	96.635	96.91	0.105					28	8	5	0	0	0	0.89803	1	40478	40478		0.15932	0.01943	1	51818000	+		42539	10917	20809	20898	49206	49206					0.15870245775340663
YCKVKLTCR	9	Unmodified	_YCKVKLTCR_					0	0	0			REV__FNIP2|p.D1024Efs*59|1|0.07|ENSG00000052795|chr4:158891567-158891568|-/AG|frameshift_variant	REV__FNIP2|p.D1024Efs*59|1|0.07|ENSG00000052795|chr4:158891567-158891568|-/AG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1017639040947	3	371.868428	1112.58346	2.299	0.00085492	3.7428	0.0013918	6.0418	0.0022468	371.86939481862345	73.346	0.24825	75.144	75.009	75.257	1.7987					10	7	2	0	0	0	0.11946	1	30785	30785		0	0	1	292380	+		42540	14163	20810	20899	49207	49207					0.03166722481751094
YCLRAPFSA	9	Unmodified	_YCLRAPFSA_					0	0	0			REV__nc|ENSG00000172197|Q6ZNC8-2|MBOAT1	REV__nc|ENSG00000172197|Q6ZNC8-2|MBOAT1	MSMS	GG20161007_CRH_Patient100_W632_02	4	343.1736328005791	3	343.172505	1026.49569	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.739	1	94.016	93.516	94.516	1.277								0	0	0	0.42693	1	39029	39029		1.0715	0	1		+		42541	11058	20811	20900	49208	49208					-0.016501551173632834
YCLSCIRQW	9	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))YC(Carbamidomethyl (C))LSCIRQW_	YC(0.998)LSC(0.002)IRQW		YC(28)LSC(-28)IRQW		1	1	0		MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion;nc|ENSG00000075975|Q9H000-2|MKRN2;ENSG00000075975|ENST00000170447|MKRN2	MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion	MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	635.7908203005791	2	635.789001	1269.56345	0.28403	0.00018058	-0.20055	-0.00012751	0.08348	5.3075E-05	635.7891500947896	51.203	0.33575	52.597	52.407	52.743	1.3938					24	10	3	0	0	0	0.093059	1	21428	21428		51.63	24.746	2	3475400			42542	943	20812	20901	49209	49209	3				-0.060550732488536596
YCLSCIRQW	9	Acetyl (Protein N-term),Carbamidomethyl (C)	_(Acetyl (Protein N-term))YC(Carbamidomethyl (C))LSCIRQW_	YC(0.993)LSC(0.007)IRQW		YC(22)LSC(-22)IRQW		1	1	0		MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion;nc|ENSG00000075975|Q9H000-2|MKRN2;ENSG00000075975|ENST00000170447|MKRN2	MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion	MKRN2|p.C276_P283delinsS|1|0.03|ENSG00000075975|chr3:12574976-12574996|GTGCCAAACAGTTTGAAAACC/-|inframe_deletion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	635.7897216677666	2	635.789001	1269.56345	0.11188	7.1135E-05	0.31816	0.00020228	0.43005	0.00027342	635.7899383672321	50.59	0.3019	52.565	52.425	52.727	1.9753					22	9	3	0	0	0	0.1109	1	21202	21202		45.7	18.071	2	3402400			42543	943	20812	20901	49210	49210	3				-0.060550732488536596
YCMGALVSAL	10	Unmodified	_YCMGALVSAL_					0	0	0			REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	343.1716796755791	3	343.169884	1026.48782	-1.5542	-0.00053335	4.1243	0.0014153	2.5701	0.00088197	343.1725310976754	70.675	0.39293	70.675	70.449	70.842	0					32	12	4	0	0	0	0.87343	1	29409	29409		2.086	0.34373	1	1283800	+		42544	14627	20813	20902	49211	49211					-0.024360504291507823
YCMGALVSAL	10	Unmodified	_YCMGALVSAL_					0	0	0			REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	343.169884	1026.48782	-1.5542	-0.00053335	4.1243	0.0014153	2.5701	0.00088197	343.1725310976754	70.675	0.39293	70.675	70.449	70.842	0	0.079658	-0.0015596	NaN	2.086	32	12	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1283800	+		42545	14627	20813	20902							-0.024360504291507823
YCMGALVSAL	10	Unmodified	_YCMGALVSAL_					0	0	0			REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	REV__SLC7A1|p.L82M|1|0.09|ENSG00000139514|chr13:29535945-29535945|G/T|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	343.169884	1026.48782	0.70552	0.00024211	6.0538	0.0020775	6.7593	0.0023196	343.1720695727345	69.15	0.64583	70.516	70.028	70.674	1.3657	-0.079658	0.00042681	NaN	2.086	25	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1543100	+		42546	14627	20813	20902							-0.024360504291507823
YCQGSEECDE	10	Unmodified	_YCQGSEECDE_					0	0	0		tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	tr|A0A7D6VRS1|A0A7D6VRS1_9CLOTFeMocofactorbiosynthesisproteinNifBOS=ClostridiumintestinaleOX=36845GN=nifBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1280700564384	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.991	1	76.313	75.813	76.813	0.32163								0	0	0	0.66264	1	31780	31780		0	0	1				42547	16841	20814	20903	49212	49212					-0.2151710192072187
YCSSDDAV	8	Unmodified	_YCSSDDAV_					0	0	0		tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	859.3132812380791	1	859.313825	858.306548	1.2619	0.0010844	-3.2309	-0.0027764	-1.969	-0.001692	859.3112813706205	98.8	0.22138	98.8	98.686	98.907	0					17	7	3	0	0	0	0.89008	1	41318	41318		2.5775	0	1	54695000			42548	16305	20815	20904	49213	49213					-0.12827272201354845
YCSSDDAV	8	Unmodified	_YCSSDDAV_					0	0	0		tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	859.3141967654228	1	859.313825	858.306548	2.7867	0.0023946	-3.2683	-0.0028085	-0.48163	-0.00041387	859.3111897318058	98.723	0.19646	98.803	98.707	98.904	0.080376					15	6	3	0	0	0	0.89008	1	41302	41302		2.5775	0	1	58436000			42549	16305	20815	20904	49214	49214					-0.12827272201354845
YCSSDDAV	8	Unmodified	_YCSSDDAV_					0	0	0		tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	859.3143188357353	1	859.313825	858.306548	2.7897	0.0023972	-1.263	-0.0010853	1.5267	0.0013119	859.3126587975013	102.15	0.14193	102.21	102.13	102.27	0.062805					10	4	3	0	0	0	0.89008	1	42776	42776		2.5775	0	1	18328000			42550	16305	20815	20904	49215	49215					-0.12827272201354845
YCSSDDAV	8	Unmodified	_YCSSDDAV_					0	0	0		tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3167602419853	1	859.313825	858.306548	3.3827	0.0029068	-0.63814	-0.00054836	2.7446	0.0023585	859.3133495368355	98.514	0.19806	98.742	98.642	98.84	0.22776					10	6	2	0	0	0	0.89008	1	41461	41461		2.5775	0	1	45318000			42551	16305	20815	20904	49216	49216					-0.12827272201354845
YCSSDDAV	8	Unmodified	_YCSSDDAV_					0	0	0		tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	tr|A0A553SKT6|A0A553SKT6_NIACIAminomethyltransferaseOS=NialliacirculansOX=1397GN=gcvTPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	859.3139526247978	1	859.313825	858.306548	2.9963	0.0025748	-3.4555	-0.0029693	-0.45914	-0.00039455	859.3098467241626	102.07	0.11367	102.24	102.16	102.28	0.17032					6	3	2	0	0	0	0.89008	1	42943	42943		2.5775	0	1	15634000			42552	16305	20815	20904	49217	49217					-0.12827272201354845
YCSSGSLL	8	Unmodified	_YCSSGSLL_					0	0	0		nc|ENSG00000263528|Q14164-2|IKBKE;ENSG00000263528|ENST00000581977|IKBKE	nc|ENSG00000263528|Q14164-2|IKBKE	nc|ENSG00000263528|Q14164-2|IKBKE	MSMS	GG20161007_CRH_Patient100_A02_02	2	415.1945068240166	2	415.191654	828.368755	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.014	1	90.223	89.723	90.723	0.20904								0	0	0	1.0178	1	37720	37720		0.79363	0	1				42553	5429	20816	20905	49218	49218					-0.05229501062342479
YCVFLLIWI	9	Unmodified	_YCVFLLIWI_					0	0	0			REV__ENSG00000176988|ENST00000370467|FMR1NB	REV__ENSG00000176988|ENST00000370467|FMR1NB	MSMS	GG20161007_CRH_Patient100_W632_01	3	585.3255493044853	2	585.325014	1168.63547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.67	1	103.83	103.33	104.33	0.16055								0	0	0	0.42693	1	43750	43750		2.3027	0.9732	1		+		42554	11201	20817	20906	49219	49219					0.05790209167162175
YCYFWFVETV	10	Unmodified	_YCYFWFVETV_					0	0	0			REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	REV__ENST00000290075.10_1_8:23423911-23424199:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	452.8705016970634	3	452.870492	1355.58965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7125	1	4.8005	4.3005	5.3005	0.08803								0	0	0	0.66254	1	1947	1947		0.15932	0	1		+		42555	12279	20818	20907	49220	49220					-0.07392480805742707
YCYSTHDLL	9	Unmodified	_YCYSTHDLL_					0	0	0			REV__ENSG00000186094|ENST00000371839|AGBL4	REV__ENSG00000186094|ENST00000371839|AGBL4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7482787966728	2	557.747324	1113.4801	1.8156	0.0010126	-0.58268	-0.00032499	1.2329	0.00068763	557.7471973428618	43.423	0.29644	44.777	44.59	44.886	1.3536					25	9	4	0	0	0	0.68551	1	18228	18228		7.9102	0.62092	1	1528200	+		42556	11488	20819	20908	49221	49221					-0.0721048642506048
YDDSNDKNF	9	Unmodified	_YDDSNDKNF_					0	0	0			REV__tr|A0A7D6VSH1|A0A7D6VSH1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16495PE=4SV=1	REV__tr|A0A7D6VSH1|A0A7D6VSH1_9CLOTDUF4179domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_16495PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2232543826103	2	559.225268	1116.43598	1.7963	0.0010045	-3.4838	-0.0019483	-1.6876	-0.00094375	559.2233060490516	65.161	0.43486	67.069	66.783	67.218	1.9085					33	13	5	0	0	0	0.68551	1	27318	27318		7.9102	0	1	3031400	+		42557	15446	20820	20909	49222	49222					-0.11757799317706485
YDEDWQYTEYQ	11	Unmodified	_YDEDWQYTEYQ_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	770.3033325076103	2	770.299161	1538.58377	0.11639	8.9654E-05	-0.15182	-0.00011695	-0.035436	-2.7296E-05	770.7988530417407	11.213	2.2866	11.295	9.6661	11.953	0.082325					172	76	3	0	0	0	1.037	6	4134	4134;4184;4245;4347;4519;4611		1.0715	0.76443	1	1398800	+		42558	9708	20821	20910	49223;49224;49225;49226;49227;49228	49223					-0.1639795257433434
YDEDWQYTEYQ	11	Unmodified	_YDEDWQYTEYQ_					0	0	0			REV__ENSG00000127083|ENST00000375550|OMD	REV__ENSG00000127083|ENST00000375550|OMD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	770.3031494021416	2	770.299161	1538.58377	-0.96152	-0.00074066	2.6888	0.0020712	1.7273	0.0013305	770.3029451765918	10.73	1.708	11.399	10.242	11.95	0.66934					124	57	3	0	0	0	1.037	2	4043	4043;4384		1.0715	0.76443	1	2710300	+		42559	9708	20821	20910	49229;49230	49229					-0.1639795257433434
YDEQQNFF	8	Unmodified	_YDEQQNFF_					0	0	0		ENST00000478787.1_1_10:102296230-102304880:+|nuORF;ENSG00000166135|ENST00000299163|HIF1AN	ENST00000478787.1_1_10:102296230-102304880:+|nuORF	ENST00000478787.1_1_10:102296230-102304880:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	545.2950317263603	2	545.727446	1089.44034	2.7198	0.0014843	-3.1529	-0.0017206	-0.43306	-0.00023633	545.725852965925	75.399	0.30773	77.181	77.04	77.347	1.7817					16	9	2	0	0	0	2.3239	1	31611	31611		2.5775	0	1	977780			42560	3880	20822	20911	49231	49231					-0.10080290104133383
YDERYSFL	8	Unmodified	_YDERYSFL_					0	0	0			REV__ENST00000524065.4_1_8:1626542-1636458:+|nuORF	REV__ENST00000524065.4_1_8:1626542-1636458:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	546.7538940310478	2	546.753464	1091.49238	2.7134	0.0014836	-1.5619	-0.00085396	1.1515	0.00062961	546.7523692366092	75.151	0.46698	76.932	76.699	77.166	1.7817					40	14	4	0	0	0	0.62161	1	31479	31479		38.151	0	1	4552400	+		42561	8447	20823	20912	49232	49232					-0.04971126690384153
YDETEETDD	9	Unmodified	_YDETEETDD_					0	0	0			REV__BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	REV__BCLAF1|p.F509Wfs*32|1|0.12|ENSG00000029363|chr6:136275999-136276000|-/TATGTTCC|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	373.0994445681572	3	372.799896	1115.37786	1.8307	0.00068249	-0.51944	-0.00019365	1.3113	0.00048884	372.79972566911584	44.391	0.79425	46.351	46.069	46.863	1.9596					30	24	2	0	0	0	0.11954	1	18527	18527		0.26902	0	1	1142500	+		42562	8163	20824	20913	49233	49233					-0.17521525753659262
YDEYMFYL	8	Unmodified	_YDEYMFYL_					0	0	0		nc|ENSG00000087903|P48378-2|RFX2;ENSG00000087903|ENST00000303657|RFX2;ENST00000590778.1_1_19:5994848-5997295:-|nuORF;ENSG00000080298|ENST00000617270|RFX3;nc|ENSG00000080298|P48380-2|RFX3	nc|ENSG00000087903|P48378-2|RFX2;ENSG00000080298|ENST00000617270|RFX3	nc|ENSG00000087903|P48378-2|RFX2	MSMS	GG20161007_CRH_Patient100_A02_01	1	572.2424194216728	2	572.238801	1142.46305	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.153	1	54.153	53.653	54.653	0								0	0	0	1.0178	1	22573	22573		6.3541	2.0249	1				42563	1093;1000	20825	20914	49234	49234					-0.10248407030871931
YDIGLDRI	8	Unmodified	_YDIGLDRI_					0	0	0		ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.7594482302666	2	482.758549	963.502546	2.1771	0.001051	0.47187	0.0002278	2.649	0.0012788	482.75892386290036	48.773	0.32176	48.773	48.649	48.97	0					16	9	2	0	0	0	0.74295	2	20360	20360;20409		26.268	7.0112	1	931560			42564	4018	20826	20915	49235;49236	49235					0.01933481034848228
YDIGLDRI	8	Unmodified	_YDIGLDRI_					0	0	0		ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	ENSG00000168135|ENST00000303592|KCNJ4	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.7601806521416	2	482.758549	963.502546	2.5236	0.0012183	-0.12239	-5.9085E-05	2.4012	0.0011592	482.758667427133	48.38	0.26469	48.71	48.556	48.821	0.33034					9	8	2	0	0	0	0.783	1	20294	20294		22.736	3.4793	1	258270			42565	4018	20826	20915	49237	49237					0.01933481034848228
YDIRYDDF	8	Unmodified	_YDIRYDDF_					0	0	0			REV__tr|A0A553STE2|A0A553STE2_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_04895PE=3SV=1	REV__tr|A0A553STE2|A0A553STE2_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_04895PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.7443725466728	2	553.743096	1105.47164	0.5689	0.00031502	3.6633	0.0020285	4.2322	0.0023435	553.744599098761	25.911	0.27289	27.628	27.459	27.732	1.7167					16	8	3	0	0	0	0.87276	1	10827	10827		13.508	1.8676	1	644040	+		42566	15237	20827	20916	49238	49238					-0.07687717070052713
YDKLKQLI	8	Unmodified	_YDKLKQLI_					0	0	0			REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.8075439333916	2	510.808042	1019.60153	1.1228	0.00057354	-1.0517	-0.00053724	0.071064	3.63E-05	510.8074974270015	55.744	0.27556	57.154	56.966	57.241	1.4099					22	14	2	0	0	0	0.33907	1	23323	23323		68.081	1.624	1	5090600	+		42567	14760	20828	20917	49239	49239					0.09251503999769284
YDKLKQLI	8	Unmodified	_YDKLKQLI_					0	0	0			REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.8074523806572	2	510.808042	1019.60153	0.43482	0.00022211	0.35386	0.00018075	0.78868	0.00040286	510.8079752158286	55.2	0.29269	57.169	56.959	57.252	1.9684					23	13	2	0	0	0	0.1274	1	23148	23148		88.904	3.6316	1	6382600	+		42568	14760	20828	20917	49240	49240					0.09251503999769284
YDKLKQLI	8	Unmodified	_YDKLKQLI_					0	0	0			REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	REV__tr|A0A553SGN6|A0A553SGN6_NIACIPhosphoribosylglycinamideformyltransferaseOS=NialliacirculansOX=1397GN=purNPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	510.808042	1019.60153	1.1228	0.00057354	-1.0517	-0.00053724	0.071064	3.63E-05	510.8074974270015	55.744	0.27556	57.154	56.966	57.241	1.4099	-0.0074132	-0.00077474	NaN	88.904	22	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5090600	+		42569	14760	20828	20917							0.09251503999769284
YDKMRLEMWER	11	Unmodified	_YDKMRLEMWER_					0	0	0		ENST00000485606.1_1_1:11140819-11141291:-|nuORF;nc|ENSG00000171824|Q01780-2|EXOSC10;ENSG00000171824|ENST00000376936|EXOSC10	ENST00000485606.1_1_1:11140819-11141291:-|nuORF	ENST00000485606.1_1_1:11140819-11141291:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.5847045779228	3	519.583128	1555.72755	0.8506	0.00044196	1.7235	0.00089548	2.5741	0.0013374	519.5843049139343	15.264	0.62152	15.264	15.061	15.682	0					69	19	6	0	0	0	1.0282	1	6350	6350		2.084	0.86914	1	41450000			42570	4214	20829	20918	49241	49241					-0.028081005487592847
YDKMVISL	8	Oxidation (M)	_YDKM(Oxidation (M))VISL_		YDKM(1)VISL		YDKM(46)VISL	0	0	1		ENSG00000071894|ENST00000616140|CPSF1;CPSF1-RECQL4|1|fusion	ENSG00000071894|ENST00000616140|CPSF1	ENSG00000071894|ENST00000616140|CPSF1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	492.7587768435478	2	492.757161	983.499769	1.0185	0.00050187	0.23643	0.0001165	1.2549	0.00061837	492.75710605357756	58.099	0.54451	60.068	59.702	60.247	1.969					24	17	2	0	0	0	0.52405	1	24397	24397		46.021	9.9768	1	2362700			42571	874	20830	20919	49242	49242		14			0.007358895857123571
YDMIHSGN	8	Unmodified	_YDMIHSGN_					0	0	0			REV__tr|A0A553SJW7|A0A553SJW7_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_17685PE=4SV=1	REV__tr|A0A553SJW7|A0A553SJW7_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_17685PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	469.3398620486259	2	468.697635	935.380716	3.0672	0.0014376	-0.26672	-0.00012501	2.8005	0.0013126	468.6966064771557	75.161	0.27928	76.942	76.76	77.04	1.7817					12	8	2	0	0	0	2.3239	1	31518	31518		2.3027	2.3027	1	354050	+		42572	14921	20831	20920	49243	49243					-0.08955884319152574
YDMIHSGN	8	Unmodified	_YDMIHSGN_					0	0	0			REV__tr|A0A553SJW7|A0A553SJW7_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_17685PE=4SV=1	REV__tr|A0A553SJW7|A0A553SJW7_NIACIAmidohydrolaseOS=NialliacirculansOX=1397GN=CEQ21_17685PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	468.697635	935.380716	2.777	0.0013016	-0.39452	-0.00018491	2.3825	0.0011167	468.69717389165	75.445	0.27719	76.752	76.585	76.862	1.3063	-0.095372	-5.5857E-05	NaN	2.3027	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	419270	+		42573	14921	20831	20920							-0.08955884319152574
YDMMNFWF	8	Unmodified	_YDMMNFWF_					0	0	0		tr|A0A553SFB8|A0A553SFB8_NIACIalpha,alpha-phosphotrehalaseOS=NialliacirculansOX=1397GN=treCPE=3SV=1	tr|A0A553SFB8|A0A553SFB8_NIACIalpha,alpha-phosphotrehalaseOS=NialliacirculansOX=1397GN=treCPE=3SV=1	tr|A0A553SFB8|A0A553SFB8_NIACIalpha,alpha-phosphotrehalaseOS=NialliacirculansOX=1397GN=treCPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1542541384697	3	385.154234	1152.44087	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.443	1	84.63	84.13	85.13	1.1879								0	0	0	1.0178	1	35023	35023		0.40072	0.19386	1				42574	16048	20832	20921	49244	49244					-0.12924909980279153
YDQGQPTQV	9	Unmodified	_YDQGQPTQV_					0	0	0			REV__ENST00000358711.7_1_20:62571331-62572425:-|nuORF	REV__ENST00000358711.7_1_20:62571331-62572425:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2415038943291	2	518.240721	1034.46689	2.746	0.0014231	-2.1367	-0.0011073	0.60927	0.00031575	518.2399481475172	75.496	2.7275	76.802	76.247	78.975	1.3063					291	87	8	0	0	0	0.51189	1	31814	31814		14.838	0.43289	1	7453600	+		42575	11706	20833	20922	49245	49245					-0.04896601212817586
YDQQKLAKF	9	Unmodified	_YDQQKLAKF_					0	0	0			REV__ENSG00000100368|ENST00000403662|CSF2RB	REV__ENSG00000100368|ENST00000403662|CSF2RB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8019286990166	2	570.806031	1139.59751	3.3412	0.0019072	-3.9547	-0.0022574	-0.61353	-0.00035021	570.8048694083965	74.426	0.57072	75.744	75.5	76.07	1.318					69	18	5	0	0	0	0.37357	1	31322	31322		21.747	1.293	1	12854000	+		42576	8988	20834	20923	49246	49246					0.0332941450603812
YDRRLIYI	8	Unmodified	_YDRRLIYI_					0	0	0			REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	REV__nc|ENSG00000189195|Q5XKL5-4|BTBD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	556.3321411013603	2	556.316566	1110.61858	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.54	103.04	104.04	0.059502								0	0	0	1.0178	1	43413	43413		0.79363	0.10326	1		+		42577	14515	20835	20924	49247	49247					0.0676942460556802
YDSIPQELFR	10	Unmodified	_YDSIPQELFR_					0	0	0		nc|ENSG00000196182|Q8N2I9-3|STK40;ENSG00000196182|ENST00000373132|STK40;nc|ENSG00000196182|Q8N2I9-4|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	nc|ENSG00000196182|Q8N2I9-3|STK40	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	423.2150756716728	3	423.215427	1266.62445	2.052	0.00086845	-2.7098	-0.0011468	-0.65775	-0.00027837	423.215572879635	44.636	0.38527	46.595	46.382	46.767	1.9596					32	11	4	0	0	0	0.87762	1	18740	18740		3.8763	2.6615	1	3218000			42578	4920	20836	20925	49248	49248					0.0018047832654701779
YDSTREPPA	9	Unmodified	_YDSTREPPA_					0	0	0			REV__nc|ENSG00000160345|Q5BN46-2|PIERCE1	REV__nc|ENSG00000160345|Q5BN46-2|PIERCE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2415649294853	2	518.240721	1034.46689	2.746	0.0014231	-2.1367	-0.0011073	0.60927	0.00031575	518.2399481475172	75.496	2.7275	76.802	76.247	78.975	1.3063					291	87	8	0	0	0	0.70108	1	31711	31711		7.2892	0.93513	1	7453600	+		42579	10602	20837	20926	49249	49249					-0.04896601212817586
YDWCHFNR	8	Unmodified	_YDWCHFNR_					0	0	0			REV__ENST00000560777.5_1_14:24738065-24739201:-|nuORF	REV__ENST00000560777.5_1_14:24738065-24739201:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.7359496951103	2	570.737625	1139.4607	0.44506	0.00025401	-2.763	-0.0015769	-2.3179	-0.0013229	570.7366061949277	19.948	0.27024	21.471	21.317	21.588	1.5237					17	8	3	0	0	0	0.89051	1	8284	8284		2.3027	0.4585	1	578040	+		42580	9016	20838	20927	49250	49250					-0.1034539792533451
YDYDFGYI	8	Unmodified	_YDYDFGYI_					0	0	0			REV__nc|ENSG00000111696|Q86UY8-2|NT5DC3	REV__nc|ENSG00000111696|Q86UY8-2|NT5DC3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.2613403201103	2	528.221465	1054.42838	3.2782	0.0017316	0.91058	0.00048099	4.1888	0.0022126	528.7238991720134	62.167	0.24011	64.124	63.968	64.208	1.9571					17	7	3	0	0	0	2.3239	1	26094	26094		19.439	1.304	1	901580	+		42581	9337	20839	20928	49251	49251					-0.09665906847340011
YEDFIQWHHFY	11	Unmodified	_YEDFIQWHHFY_					0	0	0			REV__ENST00000451333.1_1_2:71037932-71038202:-|nuORF	REV__ENST00000451333.1_1_2:71037932-71038202:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	528.3158447146416	3	528.901731	1583.68336	0.71093	0.00037601	-0.36401	-0.00019252	0.34693	0.00018349	528.90216533675	23.712	0.16811	25.364	25.271	25.439	1.6511					8	5	2	0	0	0	0.14606	1	9879	9879		0.094841	0	1	217600	+		42582	13136	20840	20929	49252	49252					-0.08513045379095274
YEDLYCSNF	9	Unmodified	_YEDLYCSNF_					0	0	0			REV__nc|ENSG00000103197|P49815-7|TSC2	REV__nc|ENSG00000103197|P49815-7|TSC2	MSMS	GG20161007_CRH_Patient100_W632_02	4	385.1566650271416	3	385.155069	1152.44338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.096	1	99.322	98.822	99.822	0.22545								0	0	0	0.42693	1	41699	41699		0.96228	0.33545	1		+		42583	9099	20841	20930	49253	49253					-0.12674783041643423
YEDMESFTI	9	Unmodified	_YEDMESFTI_					0	0	0		ENST00000529787.2_1_9:100092438-100109914:+|nuORF;CCDC180|p.H1510Ffs*11|1|0.03|ENSG00000197816|chr9:97370685-97370686|-/TT|frameshift_variant;ENSG00000197816|ENST00000529487|CCDC180;ENST00000375206.6_1_9:100053158-100139173:+|nuORF;nc|ENSG00000197816|Q9P1Z9|CCDC180;ENST00000494917.6_1_9:100069637-100105846:+|nuORF;ENST00000460482.6_1_9:100070037-100107975:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	ENST00000529787.2_1_9:100092438-100109914:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.7382690310478	2	567.736622	1133.45869	2.6805	0.0015218	2.5427	0.0014436	5.2232	0.0029654	567.7384061418078	62.641	0.28254	64.585	64.469	64.752	1.9444					16	8	3	0	0	0	0.5697	1	26308	26308		12.532	0.89125	1	981710			42584	124	20842	20931	49254	49254					-0.10269916244419619
YEEECTEY	8	Unmodified	_YEEECTEY_					0	0	0			REV__ENST00000514905.5_1_5:76414328-76430243:+|nuORF	REV__ENST00000514905.5_1_5:76414328-76430243:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	533.1920043826103	2	533.189505	1064.36446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	94.162	1	94.162	93.662	94.662	0								0	0	0	1.0178	1	39351	39351		0.69038	0.088878	1		+		42585	13593	20843	20932	49255	49255					-0.16515055066565765
YEEECTEY	8	Unmodified	_YEEECTEY_					0	0	0			REV__ENST00000514905.5_1_5:76414328-76430243:+|nuORF	REV__ENST00000514905.5_1_5:76414328-76430243:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	533.1951171755791	2	533.189505	1064.36446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.404	1	99.484	98.984	99.984	0.080376								0	0	0	1.0178	1	41618	41618		0.69038	0.088878	1		+		42586	13593	20843	20932	49256	49256					-0.16515055066565765
YEEEEDFFGNE	11	Unmodified	_YEEEEDFFGNE_					0	0	0			REV__ENST00000466258.1_1_1:231155611-231164468:-|nuORF	REV__ENST00000466258.1_1_1:231155611-231164468:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	469.8445922732353	3	469.845617	1406.51502	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.039	1	16.039	15.539	16.539	0								0	0	0	0.63775	1	6660	6660		1.3296	0.11481	1		+		42587	11339	20844	20933	49257	49257					-0.17197616874068444
YEELQSLAGK	10	Unmodified	_YEELQSLAGK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.2910034060478	2	569.292953	1136.57135	1.2084	0.00068792	-2.3101	-0.0013151	-1.1018	-0.00062723	569.2911854061161	26.951	0.29659	28.222	28.024	28.321	1.2715					17	9	2	0	0	0	0.045734	2	11313	11260;11313		107.1	7.0089	1	4559400		+	42588	343	20845	20934	49258;49259	49259					0.008531005438953798
YEELQSLAGK	10	Unmodified	_YEELQSLAGK_					0	0	0		nc|ENSG00000170421|P05787-2|KRT8;CON__P05787;ENSG00000170421|ENST00000692008|KRT8;ENST00000546583.5_1_12:53291214-53294602:-|nuORF;ENST00000547031.5_1_12:53292389-53294972:-|nuORF;CON__H-INV:HIT000292931	nc|ENSG00000170421|P05787-2|KRT8	nc|ENSG00000170421|P05787-2|KRT8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.2919799685478	2	569.292953	1136.57135	0.70107	0.00039911	-1.8688	-0.0010639	-1.1677	-0.00066478	569.2916136354725	26.443	0.27205	28.19	28.036	28.308	1.747					22	8	3	0	0	0	0.050585	2	11035	11035;11088		87.258	6.5822	1	4649300		+	42589	343	20845	20934	49260;49261	49260					0.008531005438953798
YEFLNWFDER	10	Unmodified	_YEFLNWFDER_					0	0	0		ENST00000453168.5_1_3:31574490-31661308:+|nuORF;ENST00000423527.5_1_3:31574490-31661461:+|nuORF;ENSG00000163527|ENST00000295770|STT3B	ENST00000453168.5_1_3:31574490-31661308:+|nuORF	ENST00000453168.5_1_3:31574490-31661308:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	473.5494262576103	3	473.550698	1417.63027	0.91909	0.00043524	-2.9645	-0.0014038	-2.0454	-0.00096859	473.54929889936403	12.262	0.18917	12.352	12.244	12.433	0.089381					10	5	3	0	0	0	0.8872	1	5087	5087		2.8433	0.4085	1	559550			42590	3694	20846	20935	49262	49262					-0.061844231617897094
YEFRRNIRKKF	11	Unmodified	_YEFRRNIRKKF_					0	0	0			REV__tr|A0A7D6VQ21|A0A7D6VQ21_9CLOTDUF3284domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19000PE=4SV=1	REV__tr|A0A7D6VQ21|A0A7D6VQ21_9CLOTDUF3284domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19000PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	519.1389037966728	3	519.631798	1555.87356	0.42859	0.00022271	-2.7588	-0.0014336	-2.3302	-0.0012109	519.6300031131163	14.119	0.15504	14.232	14.105	14.26	0.11295					7	4	2	0	0	0	0.14606	1	5827	5827		0.094841	0	1	246950	+		42591	15370	20847	20936	49263	49263					0.11786286073743213
YEHIINTTI	9	Unmodified	_YEHIINTTI_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.2935668826103	2	552.290214	1102.56587	2.7488	0.0015182	2.1553	0.0011903	4.9041	0.0027085	552.2920054946378	62.493	0.6426	63.906	63.583	64.226	1.4134					75	20	5	0	0	0	0.15635	1	26133	26133		37.974	1.847	1	83089000	+		42592	15426	20848	20937	49264	49264					0.018694217520987877
YEHIINTTI	9	Unmodified	_YEHIINTTI_					0	0	0			REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	REV__tr|A0A7D6VRT5|A0A7D6VRT5_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.2935668826103	2	552.290214	1102.56587	2.7411	0.0015139	2.6741	0.0014769	5.4152	0.0029908	552.29209706138	61.91	0.67306	63.867	63.594	64.267	1.9571					64	21	5	0	0	0	0.073578	2	25960	25960;26011		58.679	6.4105	1	61184000	+		42593	15426	20848	20937	49265;49266	49265					0.018694217520987877
YEIQRTKPF	9	Unmodified	_YEIQRTKPF_					0	0	0		CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant;ENSG00000198752|ENST00000361246|CDC42BPB	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	CDC42BPB|p.S1423Ffs*2|1|0.11|ENSG00000198752|chr14:102944030-102944031|AG/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3236572146416	2	591.319306	1180.62406	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.063	1	55.467	54.967	55.967	1.4048								0	0	0	0.3709	1	22631	22631		11.64	0.81637	1				42594	135	20849	20938	49267	49267					0.040971033973846716
YEKKAKVATL	10	Unmodified	_YEKKAKVATL_					0	0	0			REV__tr|A0A553SU87|A0A553SU87_NIACIDUF916andDUF3324domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06465PE=4SV=1	REV__tr|A0A553SU87|A0A553SU87_NIACIDUF916andDUF3324domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	575.2780029177666	2	575.845156	1149.67576	1.3157	0.00075764	0.99624	0.00057368	2.3119	0.0013313	575.8442568317702	77.294	0.31787	79.045	78.849	79.167	1.7514					15	9	2	0	0	0	0.12525	1	32364	32364		6.7232	0	1	461160	+		42595	15283	20850	20939	49268	49268					0.10690847091291289
YELAKKVF	8	Unmodified	_YELAKKVF_					0	0	0		ENSG00000188596|ENST00000524981|CFAP54;nc|ENSG00000188596|Q96N23-2|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	ENSG00000188596|ENST00000524981|CFAP54	MSMS	GG20161007_CRH_Patient100_W632_02	4	499.2902404665947	2	499.289485	996.564418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.864	1	49.84	49.34	50.34	1.976								0	0	0	1.0178	1	20046	20046		9.3474	0.75416	1				42596	4871	20851	20940	49269	49269					0.06599832453991894
YELCGPACPT	10	Unmodified	_YELCGPACPT_					0	0	0		FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant;ENSG00000275395|ENST00000616721|FCGBP;nc|ENSG00000275395|Q9Y6R7|FCGBP;FCGBP|p.A1781Dfs*19|1|0.1|ENSG00000275395|chr19:39894419-39894419|G/-|frameshift_variant	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	FCGBP|p.R3654Pfs*65|1|0.08|ENSG00000275395|chr19:39873438-39873438|C/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	527.2247192263603	2	527.222628	1052.4307	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.86	1	103.92	103.42	104.42	0.059502								0	0	0	0.66052	1	43677	43677		3.5965	0.31518	1				42597	5461	20852	20941	49270	49270					-0.09341517705524893
YEMDYPEDI	9	Unmodified	_YEMDYPEDI_					0	0	0		tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	587.7355834841728	2	587.73408	1173.45361	1.8905	0.0011111	0.96644	0.00056801	2.8569	0.0016791	587.7349550294513	72.907	0.62793	72.907	72.653	73.28	0					96	19	10	0	0	0	0.59203	1	30300	30300		11.64	4.3511	1	19821000			42598	16907	20853	20942	49271	49271					-0.12618220107060552
YEMDYPEDI	9	Unmodified	_YEMDYPEDI_					0	0	0		tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	587.7356445193291	2	587.73408	1173.45361	2.2638	0.0013305	1.2093	0.00071073	3.4731	0.0020413	587.7348912390147	71.293	0.51305	72.634	72.392	72.905	1.3415					94	16	9	0	0	0	0.46905	3	29955	29869;29913;29955		16.942	5.302	1	32101000			42599	16907	20853	20942	49272;49273;49274	49274					-0.12618220107060552
YEMDYPEDI	9	Unmodified	_YEMDYPEDI_					0	0	0		tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	tr|A0A7D6VT97|A0A7D6VT97_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_01990PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	587.7366821169853	2	587.73408	1173.45361	0.90723	0.00053321	2.4427	0.0014357	3.3499	0.0019689	587.7356037545217	70.857	0.51379	72.694	72.441	72.955	1.8378					98	16	9	0	0	0	0.37357	3	29718	29671;29718;29768		21.747	5.8995	1	31908000			42600	16907	20853	20942	49275;49276;49277	49276					-0.12618220107060552
YEMTPLPASI	10	Unmodified	_YEMTPLPASI_					0	0	0			REV__nc|ENSG00000140836|Q15911-2|ZFHX3	REV__nc|ENSG00000140836|Q15911-2|ZFHX3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2802612185478	2	561.281	1120.54745	2.8972	0.0016262	-0.21637	-0.00012144	2.6808	0.0015047	561.7829712427887	70.158	0.59624	71.512	71.116	71.712	1.3536					58	18	5	0	0	0	0.77604	1	29356	29356		14.838	0	1	8697300	+		42601	10133	20854	20943	49278	49278					-0.008004562141422866
YENLKWTLERK	11	Unmodified	_YENLKWTLERK_					0	0	0		nc|ENSG00000176155|Q2TAC2-2|CCDC57;nc|ENSG00000176155|Q2TAC2|CCDC57;ENSG00000176155|ENST00000694881|CCDC57	nc|ENSG00000176155|Q2TAC2-2|CCDC57	nc|ENSG00000176155|Q2TAC2-2|CCDC57	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	740.9022704958916	2	740.401358	1478.78816	2.4198	0.0017916	0.12787	9.4675E-05	2.5477	0.0018863	740.4011022644705	58.376	0.28253	58.699	58.556	58.839	0.32298					21	8	3	0	0	0	0.87205	1	24450	24450		11.495	5.7629	1	1261400			42602	4397	20855	20944	49279	49279					0.06792076097462996
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1732055544853	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.992	1	98.083	97.583	98.583	0.090881								0	0	0	0.63775	1	41003	41003		0.094841	0	1		+		42603	9012	20856	20945	49280	49280					-0.1800895926321573
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1717407107353	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.096	1	98.187	97.687	98.687	0.090881								0	0	0	0.63775	1	41046	41046		0.094841	0	1		+		42604	9012	20856	20945	49281	49281					-0.1800895926321573
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1714050173759	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.189	1	98.28	97.78	98.78	0.090881								0	0	0	0.63775	1	41085	41085		0.094841	0	1		+		42605	9012	20856	20945	49282	49282					-0.1800895926321573
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1719543337822	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.298	1	98.388	97.888	98.888	0.089958								0	0	0	0.63775	1	41132	41132		0.094841	0	1		+		42606	9012	20856	20945	49283	49283					-0.1800895926321573
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_A02_02	2	459.1724120974541	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.56	1	102.62	102.12	103.12	0.062805								0	0	0	0.63775	1	42962	42962		0.094841	0	1		+		42607	9012	20856	20945	49284	49284					-0.1800895926321573
YEPDECDKDFD	11	Unmodified	_YEPDECDKDFD_					0	0	0			REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	REV__nc|ENSG00000100888|Q9HCK8-2|CHD8	MSMS	GG20161007_CRH_Patient100_W632_02	4	459.1755248904228	3	459.171335	1374.49218	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.5	1	111.65	111.15	112.15	0.15038								0	0	0	0.63775	1	48323	48323		0.094841	0	1		+		42608	9012	20856	20945	49285	49285					-0.1800895926321573
YERTLSDCP	9	Unmodified	_YERTLSDCP_					0	0	0		LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant;ENSG00000138131|ENST00000260702|LOXL4	LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant	LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	541.9612914919853	2	542.242406	1082.47026	0.52702	0.00028577	4.0698	0.0022068	4.5968	0.0024926	542.243284235021	17.881	0.24069	18.86	18.691	18.932	0.97922					19	8	4	0	0	0	0.08828	1	7419	7419		28.487	8.0332	1	847940			42609	2816	20857	20946	49286	49286					-0.06767674430443549
YERTLSDCP	9	Unmodified	_YERTLSDCP_					0	0	0		LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant;ENSG00000138131|ENST00000260702|LOXL4	LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant	LOXL4|p.V443Pfs*13|1|0.36|ENSG00000138131|chr10:98256881-98256882|-/AGTGCACCGG|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	541.9608642458916	2	542.242406	1082.47026	0.34584	0.00018753	2.3605	0.0012799	2.7063	0.0014675	542.2425458388793	17.502	0.20074	18.805	18.67	18.87	1.3023					14	6	3	0	0	0	0.1006	1	7264	7264		21.747	2.3076	1	1017300			42610	2816	20857	20946	49287	49287					-0.06767674430443549
YERTWEIL	8	Unmodified	_YERTWEIL_					0	0	0		ENST00000523003.5_1_5:70351153-70358599:-|nuORF;ENST00000522654.5_1_5:70344846-70358599:-|nuORF;ENST00000502619.5_1_5:68860950-68874677:+|nuORF;ENST00000521942.5_1_5:70344502-70358599:-|nuORF;ENSG00000183474|ENST00000380729|GTF2H2C;ENSG00000145736|ENST00000274400|GTF2H2;ENST00000508065.7_1_5:69716099-69743177:+|nuORF;ENST00000507549.7_1_5:69716099-69717567:+|nuORF;ENST00000508325.5_1_5:68860950-68862940:+|nuORF	ENST00000523003.5_1_5:70351153-70358599:-|nuORF	ENST00000523003.5_1_5:70351153-70358599:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.2873412966728	2	555.284931	1108.55531	0.71427	0.00039662	-0.37512	-0.0002083	0.33916	0.00018833	555.2842906311319	51.585	1.0662	52.981	52.171	53.237	1.3966					102	35	4	0	0	0	0.87935	1	21323	21323		9.3474	0	1	9624500			42611	3122	20858	20947	49288	49288					0.005374390976612631
YESILNQDL	9	Unmodified	_YESILNQDL_					0	0	0		nc|ENSG00000126217|O15068-5|MCF2L;nc|ENSG00000126217|O15068-4|MCF2L;nc|ENSG00000126217|O15068-3|MCF2L;nc|ENSG00000126217|O15068-2|MCF2L;nc|ENSG00000126217|O15068-6|MCF2L;nc|ENSG00000126217|O15068-8|MCF2L;nc|ENSG00000126217|O15068-10|MCF2L;ENSG00000126217|ENST00000535094|MCF2L;nc|ENSG00000126217|O15068|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	nc|ENSG00000126217|O15068-5|MCF2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.5163452029228	3	365.516995	1093.52915	-0.87708	-0.00032059	-1.4066	-0.00051414	-2.2837	-0.00083473	365.5171526779793	15.461	0.17518	16.287	16.2	16.375	0.82643					17	5	4	0	0	0	0.76103	1	6455	6455		4.897	0	1	1322100			42612	2303	20859	20948	49289	49289					-0.013868748644881634
YETNIRVTL	9	Unmodified	_YETNIRVTL_					0	0	0		ENSG00000175894|ENST00000323084|TSPEAR;nc|ENSG00000175894|Q8WU66-2|TSPEAR	ENSG00000175894|ENST00000323084|TSPEAR	ENSG00000175894|ENST00000323084|TSPEAR	MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7975341677666	2	554.803488	1107.59242	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.254	1	48.224	47.724	48.724	1.9703								0	0	0	0.33839	1	19378	19378		14.838	0	1				42613	4388	20860	20949	49290	49290					0.0429311064342528
YETTAKESLRR	11	Unmodified	_YETTAKESLRR_					0	0	0		nc|ENSG00000163681|Q14BN4-7|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP;ENSG00000163681|ENST00000671191|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	MSMS	GG20161007_CRH_Patient100_A02_02	2	451.9091674685478	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.84046	1	0.9875	0.4875	1.4875	0.14703								0	0	0	0.63775	1	346	346		0	0	1				42614	3713	20861	20950	49291	49291					0.042583396495729176
YETTAKESLRR	11	Unmodified	_YETTAKESLRR_					0	0	0		nc|ENSG00000163681|Q14BN4-7|SLMAP;ENST00000467901.1_1_3:57743378-57875870:+|nuORF;nc|ENSG00000163681|Q14BN4-6|SLMAP;nc|ENSG00000163681|Q14BN4-2|SLMAP;nc|ENSG00000163681|Q14BN4-3|SLMAP;nc|ENSG00000163681|Q14BN4|SLMAP;ENSG00000163681|ENST00000671191|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	nc|ENSG00000163681|Q14BN4-7|SLMAP	MSMS	GG20161007_CRH_Patient100_W632_01	3	451.9081909060478	3	451.908886	1352.70483	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7345	1	9.371	8.871	9.871	0.63651								0	0	0	0.63775	1	3626	3626		0	0	1				42615	3713	20861	20950	49292	49292					0.042583396495729176
YETWTPHW	8	Unmodified	_YETWTPHW_					0	0	0			REV__ENST00000503343.5_1_4:79838964-79847734:-|nuORF	REV__ENST00000503343.5_1_4:79838964-79847734:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2516967654228	2	560.248349	1118.48214	3.4397	0.0019271	1.6652	0.0009329	5.1048	0.00286	560.2493934844854	81.349	0.36682	83.044	82.892	83.258	1.6959					37	11	5	0	0	0	0.87935	1	34198	34198		9.3474	0.75416	1	1584100	+		42616	13516	20862	20951	49293	49293					-0.07235689624963015
YEWKEDLTYR	10	Unmodified	_YEWKEDLTYR_					0	0	0		tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	468.2288390994072	3	468.226103	1401.65648	2.3761	0.0011126	1.845	0.00086389	4.2212	0.0019765	468.22707737836305	47.308	0.2861	47.308	47.149	47.435	0					20	8	3	0	0	0	0.84833	2	19755	19755;19807		7.0371	3.4444	1	888560			42617	16333	20863	20952	49294;49295	49294					-0.028281539902991426
YEWKEDLTYR	10	Unmodified	_YEWKEDLTYR_					0	0	0		tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	tr|A0A553SLI6|A0A553SLI6_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_20580PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	468.226103	1401.65648	2.4575	0.0011507	2.3703	0.0011098	4.8278	0.0022605	468.227038947313	46.887	0.12754	47.217	47.105	47.233	0.33034	-0.045423	0.00037047	NaN	7.0371	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	443710			42618	16333	20863	20952							-0.028281539902991426
YEWKQIDRASW	11	Unmodified	_YEWKQIDRASW_					0	0	0			REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.5750915408134	3	494.577247	1480.70991	0.88092	0.00043568	-3.6761	-0.0018181	-2.7952	-0.0013825	494.575559997087	13.413	0.12414	13.512	13.436	13.56	0.09944					8	3	3	0	0	0	0.95935	1	5574	5574		6.2344	1.8282	1	654950	+		42619	9121	20864	20953	49296	49296					-0.011213564877607496
YEWKQIDRASW	11	Unmodified	_YEWKQIDRASW_					0	0	0			REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	494.577247	1480.70991	0.19443	9.6161E-05	-2.6017	-0.0012867	-2.4073	-0.0011906	494.90960624439396	13.489	0.15472	13.489	13.393	13.547	0	-0.011675	0.0008784	NaN	6.2344	9	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	563960	+		42620	9121	20864	20953							-0.011213564877607496
YEWKQIDRASW	11	Unmodified	_YEWKQIDRASW_					0	0	0			REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	REV__ENST00000559542.1_1_15:80464565-80465534:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	494.577247	1480.70991	0.88092	0.00043568	-3.6761	-0.0018181	-2.7952	-0.0013825	494.575559997087	13.413	0.12414	13.512	13.436	13.56	0.09944	0.011675	-0.00071577	NaN	6.2344	8	3	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	654950	+		42621	9121	20864	20953							-0.011213564877607496
YEYEKNLLS	9	Unmodified	_YEYEKNLLS_					0	0	0			REV__tr|A0A553SQS1|A0A553SQS1_NIACIDUF3991domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07220PE=4SV=1	REV__tr|A0A553SQS1|A0A553SQS1_NIACIDUF3991domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07220PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	579.2239868044853	2	579.787504	1157.56045	2.5835	0.0014979	-0.67734	-0.00039271	1.9061	0.0011051	579.7863827930057	69.913	0.28108	71.266	71.116	71.397	1.3536					12	8	2	0	0	0	0.10844	1	29346	29346		11.64	0.81637	1	763470	+		42622	15134	20865	20954	49297	49297					-0.012023018303580102
YEYIRTHPSK	10	Unmodified	_YEYIRTHPSK_					0	0	0		ENST00000526104.5_2_11:214726-214972:+|nuORF	ENST00000526104.5_2_11:214726-214972:+|nuORF	ENST00000526104.5_2_11:214726-214972:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	647.3317748904228	2	647.332944	1292.65134	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.899	1	24.899	24.399	25.399	0								0	0	0	0.6607	1	10388	10388		3.2813	0.28607	1				42623	7121	20866	20955	49298	49298					0.016715869377549097
YFADGVLSL	9	Unmodified	_YFADGVLSL_					0	0	0		ENST00000484824.2_1_20:32257487-32262158:-|nuORF;ENST00000606699.5_1_20:32258166-32262158:-|nuORF;nc|ENSG00000125967|Q96P71-3|NECAB3;NECAB3|p.N117Efs*97|1|0.15|ENSG00000125967|chr20:33669414-33669415|-/G|frameshift_variant;ENST00000488489.5_1_20:32247922-32262169:-|nuORF;NECAB3|p.M337Ffs*20|1|0.1|ENSG00000125967|chr20:33658538-33658539|-/GAGAATGGGTGGGATGAGGGCATGCAAA|frameshift_variant;nc|ENSG00000125967|Q96P71-2|NECAB3;ENSG00000125967|ENST00000246190|NECAB3	ENST00000484824.2_1_20:32257487-32262158:-|nuORF	ENST00000484824.2_1_20:32257487-32262158:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	492.7574340701103	2	492.755475	983.496398	1.183	0.00058294	3.5933	0.0017706	4.7763	0.0023535	492.7571365996112	58.603	0.62013	60.021	59.609	60.229	1.4181					27	19	2	0	0	0	0.12174	1	24577	24577		42.095	4.1206	1	1532200			42624	2293	20867	20956	49299	49299					0.003989628033423287
YFARIDFKF	9	Unmodified	_YFARIDFKF_					0	0	0		tr|A0A7D6ZXN7|A0A7D6ZXN7_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13875PE=4SV=1	tr|A0A7D6ZXN7|A0A7D6ZXN7_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13875PE=4SV=1	tr|A0A7D6ZXN7|A0A7D6ZXN7_9CLOTDNA3'-5'helicaseOS=ClostridiumintestinaleOX=36845GN=HZF06_13875PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1805297732353	3	402.88172	1205.62333	0.9565	0.00038535	-0.20165	-8.1241E-05	0.75485	0.00030411	402.88190170694094	55.291	0.43381	56.701	56.504	56.937	1.4099					33	14	3	0	0	0	0.11938	1	23181	23181		0.26902	0	1	2870200			42625	17193	20868	20957	49300	49300					0.028743087483007912
YFDPQYFEF	9	Unmodified	_YFDPQYFEF_					0	0	0		ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	ENSG00000084623|ENST00000677711|EIF3I	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	628.2697631716728	2	628.268947	1254.52334	3.1127	0.0019556	-3.4056	-0.0021396	-0.29285	-0.00018399	628.267200983727	72.754	0.40697	74.084	73.943	74.35	1.3297					39	12	4	0	0	0	0.22519	1	30517	30517		30.225	3.9567	1	7975200			42626	1051	20869	20958	49301	49301					-0.09373973376159483
YFEYHKVR	8	Unmodified	_YFEYHKVR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	570.8378173708916	2	571.293091	1140.57163	2.2479	0.0012842	0.46454	0.00026539	2.7124	0.0015496	571.2940685829516	41.47	0.22463	42.796	42.65	42.875	1.3254					10	6	2	0	0	0	2.3239	1	17358	17358		5.7604	1.0044	1	342490	+		42627	10501	20870	20959	49302	49302					0.0069656505440889305
YFEYHKVR	8	Unmodified	_YFEYHKVR_					0	0	0			REV__ENSG00000155761|ENST00000336338|SPAG17	REV__ENSG00000155761|ENST00000336338|SPAG17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	570.8384887576103	2	571.293091	1140.57163	2.0431	0.0011672	-0.18501	-0.0001057	1.8581	0.0010615	571.2932082795124	41.066	0.22395	42.959	42.8	43.024	1.8927					9	6	2	0	0	0	2.3239	1	17174	17174		5.7604	1.0044	1	285210	+		42628	10501	20870	20959	49303	49303					0.0069656505440889305
YFFDAAKLMF	10	Unmodified	_YFFDAAKLMF_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8105346560478	2	626.807185	1251.59982	1.9769	0.0012392	2.2043	0.0013817	4.1813	0.0026208	626.8082339248568	83.279	0.34863	84.467	84.262	84.61	1.1879					27	10	3	0	0	0	0.064034	2	34923	34923;34974		72.968	53.711	1	3661800			42629	2052	20871	20960	49304;49305	49304					-0.015918730805424275
YFFDAAKLMF	10	Unmodified	_YFFDAAKLMF_					0	0	0		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8085815310478	2	626.807185	1251.59982	2.0627	0.0012929	0.14518	9.0999E-05	2.2079	0.0013839	626.8070725539957	82.772	0.37193	84.442	84.265	84.637	1.67					26	11	3	0	0	0	0.067431	2	34738	34691;34738		106.94	79.311	1	2985100			42630	2052	20871	20960	49306;49307	49307					-0.015918730805424275
YFFDAAKLMF	10	Oxidation (M)	_YFFDAAKLM(Oxidation (M))F_		YFFDAAKLM(1)F		YFFDAAKLM(50)F	0	0	1		nc|ENSG00000118965|Q9P2L0|WDR35;ENSG00000118965|ENST00000281405|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	nc|ENSG00000118965|Q9P2L0|WDR35	MSMS	GG20161007_CRH_Patient100_W632_02	4	634.8058959841728	2	634.804642	1267.59473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.842	1	74.652	74.152	75.152	1.8101								0	0	0	0.027913	1	30559	30559		49.933	30.676	1				42631	2052	20871	20961	49308	49308		38			-0.028361769431739958
YFFRHLKLWQI	11	Unmodified	_YFFRHLKLWQI_					0	0	0		ENST00000396076.5_1_12:21797030-21799877:-|nuORF	ENST00000396076.5_1_12:21797030-21799877:-|nuORF	ENST00000396076.5_1_12:21797030-21799877:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	517.2860595583916	3	517.625873	1549.85579	1.6178	0.00083744	-1.3993	-0.0007243	0.21857	0.00011314	517.6254860757658	80.091	1.4072	81.807	80.673	82.08	1.7167					66	45	2	0	0	0	0.14606	1	33707	33707		0.45452	0	1	1231600			42632	6299	20872	20962	49309	49309					0.10285570818928136
YFFYDHFV	8	Unmodified	_YFFYDHFV_					0	0	0		ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	380.1801940798759	3	379.839521	1136.49673	-0.48233	-0.00018321	4.2033	0.0015966	3.721	0.0014134	380.1749171264437	95.895	0.1749	95.895	95.803	95.978	0					7	5	2	0	0	0	2.3239	1	40110	40110		0.45834	0.2225	1	727490			42633	4738	20873	20963	49310	49310					-0.06605617476816406
YFFYDHFV	8	Unmodified	_YFFYDHFV_					0	0	0		ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	ENSG00000185294|ENST00000329196|SPPL2C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	379.839521	1136.49673	3.2774	0.0012449	7.0955	0.0026952	10.373	0.00394	379.84217904040275	95.055	0.21449	95.796	95.639	95.853	0.74124	-0.049494	0.00036	NaN	0.45834	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687540			42634	4738	20873	20963							-0.06605617476816406
YFFYRLFKCIR	11	Unmodified	_YFFYRLFKCIR_					0	0	0			REV__ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	REV__ATP8B3|p.L1041Ffs*14|1|0.43|ENSG00000130270|chr19:1787135-1787136|-/AA|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	778.4210693240166	2	778.415757	1554.81696	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.928	1	99.153	98.653	99.653	0.22545								0	0	0	0.63775	1	41629	41629		1.3295	0.13619	1		+		42635	8151	20874	20964	49311	49311					0.06174522192895893
YFGGDDDAM	9	Unmodified	_YFGGDDDAM_					0	0	0		tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	tr|A0A7D6ZWJ8|A0A7D6ZWJ8_9CLOTLPXTGcellwallanchordomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18135PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	990.3453246951103	1	990.350939	989.343662	1.0872	0.0010767	-2.0887	-0.0020686	-1.0016	-0.00099191	990.3484361167624	10.239	0.79285	10.889	10.223	11.016	0.65058					45	26	2	0	0	0	0.83213	1	4214	4214		2.0598	1.2661	1	1814300			42636	17170	20875	20965	49312	49312					-0.15143600655596856
YFGRFDGVIDK	11	Unmodified	_YFGRFDGVIDK_					0	0	0			REV__ENST00000580605.5_1_18:693172-712587:-|nuORF	REV__ENST00000580605.5_1_18:693172-712587:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	440.1841308474541	3	439.559305	1315.65609	0.13294	5.8434E-05	-2.3066	-0.0010139	-2.1737	-0.00095546	439.55842398905094	13.656	0.27695	13.656	13.517	13.794	0					20	8	3	0	0	0	0.14606	1	5643	5643		6.6235	0	1	2312100	+		42637	9839	20876	20966	49313	49313					0.010884710804930364
YFHSRQYKH	9	Unmodified	_YFHSRQYKH_					0	0	0		ENST00000469112.5_2_1:171244541-171251486:+|nuORF;nc|ENSG00000010932|Q01740-2|FMO1;ENST00000209929.9_1_1:171154426-171178089:+|nuORF;ENSG00000010932|ENST00000617670|FMO1;ENSG00000094963|ENST00000209929|FMO2	ENST00000469112.5_2_1:171244541-171251486:+|nuORF	ENST00000469112.5_2_1:171244541-171251486:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	422.5432922244072	3	422.54399	1264.61014	-0.19889	-8.404E-05	-0.58627	-0.00024773	-0.78516	-0.00033177	422.54381002838926	16.973	0.74873	16.973	16.722	17.471	0					49	23	3	0	0	0	0.6131	1	7087	7087		10.8	2.3552	1	979910			42638	560	20877	20967	49314	49314					-0.011581293110566548
YFLAAWGLLVL	11	Unmodified	_YFLAAWGLLVL_					0	0	0		tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	tr|A0A553SMD0|A0A553SMD0_NIACIGGDEFdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22335PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	633.3691284060478	2	633.368267	1264.72198	2.2746	0.0014407	1.6382	0.0010376	3.9129	0.0024783	633.3690147350533	78.141	1.4815	79.422	78.663	80.144	1.2809					85	47	2	0	0	0	1.0031	1	32836	32836		3.5965	0.60125	1	3035600			42639	16373	20878	20968	49315	49315					0.10020911993365189
YFLDKIDVI	9	Unmodified	_YFLDKIDVI_					0	0	0		ENST00000487981.5_1_20:57478601-57484479:+|nuORF;DLGAP1-GNAS|15|fusion;DLGAP1-GNAS|21|fusion;DLGAP1-GNAS|24|fusion;DLGAP1-GNAS|3|fusion;DLGAP1-GNAS|2|fusion;DLGAP1-GNAS|11|fusion;DLGAP1-GNAS|10|fusion;DLGAP1-GNAS|13|fusion;DLGAP1-GNAS|16|fusion;DLGAP1-GNAS|1|fusion;DLGAP1-GNAS|4|fusion;DLGAP1-GNAS|7|fusion;DLGAP1-GNAS|6|fusion;DLGAP1-GNAS|9|fusion;DLGAP1-GNAS|12|fusion;DLGAP1-GNAS|5|fusion;DLGAP1-GNAS|8|fusion;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;DLGAP1-GNAS|19|fusion;DLGAP1-GNAS|18|fusion;DLGAP1-GNAS|17|fusion;DLGAP1-GNAS|14|fusion;DLGAP1-GNAS|22|fusion;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;DLGAP1-GNAS|23|fusion;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;SDCCAG8-GNAS|3|fusion;SDCCAG8-GNAS|2|fusion;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;CADM1-GNAS|3|fusion;CADM1-GNAS|2|fusion;SDCCAG8-GNAS|1|fusion;SDCCAG8-GNAS|4|fusion;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-2|GNAS;CADM1-GNAS|1|fusion;CADM1-GNAS|4|fusion;ENSG00000087460|ENST00000371085|GNAS;nc|ENSG00000087460|P63092-4|GNAS;SETD3-GNAS|3|fusion;SETD3-GNAS|2|fusion;SETD3-GNAS|1|fusion;SETD3-GNAS|4|fusion;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;DLGAP1-GNAS|20|fusion	ENST00000487981.5_1_20:57478601-57484479:+|nuORF	ENST00000487981.5_1_20:57478601-57484479:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.3148681521416	2	563.313158	1124.61176	1.8662	0.0010513	1.7432	0.00098195	3.6094	0.0020332	563.3141369715086	67.171	0.45709	68.56	68.343	68.8	1.3888					32	14	3	0	0	0	0.032536	1	28204	28204		83.429	28.655	1	3856800			42640	115	20879	20969	49316	49316					0.054440669343193804
YFLDKIDVI	9	Unmodified	_YFLDKIDVI_					0	0	0		ENST00000487981.5_1_20:57478601-57484479:+|nuORF;DLGAP1-GNAS|15|fusion;DLGAP1-GNAS|21|fusion;DLGAP1-GNAS|24|fusion;DLGAP1-GNAS|3|fusion;DLGAP1-GNAS|2|fusion;DLGAP1-GNAS|11|fusion;DLGAP1-GNAS|10|fusion;DLGAP1-GNAS|13|fusion;DLGAP1-GNAS|16|fusion;DLGAP1-GNAS|1|fusion;DLGAP1-GNAS|4|fusion;DLGAP1-GNAS|7|fusion;DLGAP1-GNAS|6|fusion;DLGAP1-GNAS|9|fusion;DLGAP1-GNAS|12|fusion;DLGAP1-GNAS|5|fusion;DLGAP1-GNAS|8|fusion;nc|ENSG00000087460|Q5JWF2-2|GNAS;nc|ENSG00000087460|Q5JWF2|GNAS;DLGAP1-GNAS|19|fusion;DLGAP1-GNAS|18|fusion;DLGAP1-GNAS|17|fusion;DLGAP1-GNAS|14|fusion;DLGAP1-GNAS|22|fusion;ENST00000476196.5_1_20:57478538-57485881:+|nuORF;DLGAP1-GNAS|23|fusion;ENST00000496934.5_1_20:57473969-57485881:+|nuORF;SDCCAG8-GNAS|3|fusion;SDCCAG8-GNAS|2|fusion;ENST00000313949.11_1_20:57415898-57485881:+|nuORF;ENST00000371075.7_3_20:57415898-57485881:+|nuORF;CADM1-GNAS|3|fusion;CADM1-GNAS|2|fusion;SDCCAG8-GNAS|1|fusion;SDCCAG8-GNAS|4|fusion;ENST00000480975.5_1_20:57464272-57485881:+|nuORF;nc|ENSG00000087460|P63092-3|GNAS;nc|ENSG00000087460|P63092-2|GNAS;CADM1-GNAS|1|fusion;CADM1-GNAS|4|fusion;ENSG00000087460|ENST00000371085|GNAS;nc|ENSG00000087460|P63092-4|GNAS;SETD3-GNAS|3|fusion;SETD3-GNAS|2|fusion;SETD3-GNAS|1|fusion;SETD3-GNAS|4|fusion;ENST00000477931.5_1_20:57464155-57485881:+|nuORF;DLGAP1-GNAS|20|fusion	ENST00000487981.5_1_20:57478601-57484479:+|nuORF	ENST00000487981.5_1_20:57478601-57484479:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.3149291872978	2	563.313158	1124.61176	1.4721	0.00082926	-0.036542	-2.0585E-05	1.4356	0.00080867	563.3133575656356	66.713	0.3911	68.602	68.373	68.764	1.8889					30	12	3	0	0	0	0.046715	1	27968	27968		70.332	24.311	1	3398200			42641	115	20879	20969	49317	49317					0.054440669343193804
YFLEMQEKLER	11	Unmodified	_YFLEMQEKLER_					0	0	0		ENST00000608648.1_1_19:18220994-18239762:+|nuORF;nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	ENST00000608648.1_1_19:18220994-18239762:+|nuORF	ENST00000608648.1_1_19:18220994-18239762:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.2522460818291	3	495.918393	1484.73335	1.7518	0.00086874	-1.6724	-0.0008294	0.079331	3.9342E-05	495.9175398567554	46.493	0.40176	47.868	47.681	48.083	1.3751					37	12	4	0	0	0	0.95289	1	19426	19426		6.6235	1.5759	1	4812100			42642	1204	20880	20970	49318	49318					0.010373212345484717
YFLEMQEKLER	11	Unmodified	_YFLEMQEKLER_					0	0	0		ENST00000608648.1_1_19:18220994-18239762:+|nuORF;nc|ENSG00000099308|O60307|MAST3;ENSG00000099308|ENST00000687212|MAST3	ENST00000608648.1_1_19:18220994-18239762:+|nuORF	ENST00000608648.1_1_19:18220994-18239762:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	495.9180480837822	3	495.918393	1484.73335	1.2497	0.00061976	-1.9041	-0.00094427	-0.65436	-0.00032451	495.9174655909507	46.055	0.36691	48.025	47.852	48.219	1.9703					39	11	5	0	0	0	0.90077	2	19308	19263;19308		9.7643	3.2369	1	4210400			42643	1204	20880	20970	49319;49320	49320					0.010373212345484717
YFLKGVLVF	9	Unmodified	_YFLKGVLVF_					0	0	0		ENSG00000031698|ENST00000234677|SARS1	ENSG00000031698|ENST00000234677|SARS1	ENSG00000031698|ENST00000234677|SARS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	543.8026000857353	2	543.323328	1084.6321	2.9655	0.0016112	2.4297	0.0013201	5.3952	0.0029314	543.3232565399124	74.27	0.43819	76.066	75.9	76.339	1.7962					21	13	2	0	0	0	0.073431	1	31126	31126		36.044	15.591	1	3699400			42644	635	20881	20971	49321	49321					0.09317282384790815
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9711181521416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.247	1	11.247	10.747	11.747	0								0	0	0	0.63775	1	4645	4645		0.30703	0	1		+		42645	12591	20882	20972	49322	49322					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9689819216728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.079	1	14.079	13.579	14.579	0								0	0	0	0.63775	1	5840	5840		0.30703	0	1		+		42646	12591	20882	20972	49323	49323					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9717895388603	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.136	1	15.136	14.636	15.636	0								0	0	0	0.63775	1	6282	6282		0.30703	0	1		+		42647	12591	20882	20972	49324	49324					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9719726443291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	17.823	1	17.823	17.323	18.323	0								0	0	0	0.63775	1	7401	7401		0.30703	0	1		+		42648	12591	20882	20972	49325	49325					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9701415896416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.948	1	21.948	21.448	22.448	0								0	0	0	0.63775	1	9128	9128		0.30703	0	1		+		42649	12591	20882	20972	49326	49326					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9740478396416	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	23.818	1	23.818	23.318	24.318	0								0	0	0	0.63775	1	9932	9932		0.30703	0	1		+		42650	12591	20882	20972	49327	49327					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9699584841728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.069	1	24.069	23.569	24.569	0								0	0	0	0.63775	1	10038	10038		0.30703	0	1		+		42651	12591	20882	20972	49328	49328					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9706298708916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	24.99	1	24.99	24.49	25.49	0								0	0	0	0.63775	1	10427	10427		0.30703	0	1		+		42652	12591	20882	20972	49329	49329					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9703246951103	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.662	1	25.662	25.162	26.162	0								0	0	0	0.63775	1	10711	10711		0.30703	0	1		+		42653	12591	20882	20972	49330	49330					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9722167849541	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.819	1	25.819	25.319	26.319	0								0	0	0	0.63775	1	10777	10777		0.30703	0	1		+		42654	12591	20882	20972	49331	49331					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9702026247978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.456	1	26.456	25.956	26.956	0								0	0	0	0.63775	1	11051	11051		0.30703	0	1		+		42655	12591	20882	20972	49332	49332					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9735595583916	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.003	1	44.003	43.503	44.503	0								0	0	0	0.63775	1	18415	18415		0.30703	0	1		+		42656	12591	20882	20972	49333	49333					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9674560427666	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.799	1	46.799	46.299	47.299	0								0	0	0	0.63775	1	19560	19560		0.30703	0	1		+		42657	12591	20882	20972	49334	49334					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9721557497978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.669	1	51.669	51.169	52.169	0								0	0	0	0.63775	1	21551	21551		0.30703	0	1		+		42658	12591	20882	20972	49335	49335					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9739257693291	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.788	1	52.788	52.288	53.288	0								0	0	0	0.63775	1	22015	22015		0.30703	0	1		+		42659	12591	20882	20972	49336	49336					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9721557497978	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.05	1	53.05	52.55	53.55	0								0	0	0	0.63775	1	22122	22122		0.30703	0	1		+		42660	12591	20882	20972	49337	49337					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9709350466728	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.184	1	54.184	53.684	54.684	0								0	0	0	0.63775	1	22586	22586		0.30703	0	1		+		42661	12591	20882	20972	49338	49338					0.2410227080374625
YFLKLILILLR	11	Unmodified	_YFLKLILILLR_					0	0	0			REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	REV__ENST00000569650.1_1_7:72469123-72470067:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	702.9744140505791	2	702.970691	1403.92683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.435	1	58.435	57.935	58.935	0								0	0	0	0.63775	1	24375	24375		0.30703	0	1		+		42662	12591	20882	20972	49339	49339					0.2410227080374625
YFLPLNAFL	9	Unmodified	_YFLPLNAFL_					0	0	0			REV__PAQR6|p.D196A|1|0.08|ENSG00000160781|chr1:156245164-156245164|T/G|missense_variant	REV__PAQR6|p.D196A|1|0.08|ENSG00000160781|chr1:156245164-156245164|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.3046142458916	2	549.305136	1096.59572	1.907	0.0010475	0.12599	6.9208E-05	2.033	0.0011167	549.3035087289288	68.138	0.61351	69.516	69.303	69.916	1.3778					48	19	3	0	0	0	0.15478	1	28616	28616		38.151	1.645	1	9025700	+		42663	14593	20883	20973	49340	49340					0.05128405488062526
YFLSGDKNF	9	Unmodified	_YFLSGDKNF_					0	0	0			REV__tr|A0A7D6ZKA2|A0A7D6ZKA2_9CLOTMulticopperoxidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01845PE=3SV=1	REV__tr|A0A7D6ZKA2|A0A7D6ZKA2_9CLOTMulticopperoxidasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_01845PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7828246951103	2	545.763832	1089.51311	2.1877	0.001194	-2.6386	-0.0014401	-0.45094	-0.00024611	545.7627492474389	43.893	0.19222	45.837	45.701	45.893	1.9438					10	5	2	0	0	0	0.70108	1	18361	18361		7.2892	0	1	1065500	+		42664	15674	20884	20974	49341	49341					-0.02806536310708907
YFQAFKAP	8	Unmodified	_YFQAFKAP_					0	0	0		tr|A0A7D6VW53|A0A7D6VW53_9CLOTPenicillin-bindingprotein2OS=ClostridiumintestinaleOX=36845GN=HZF06_02605PE=4SV=1	tr|A0A7D6VW53|A0A7D6VW53_9CLOTPenicillin-bindingprotein2OS=ClostridiumintestinaleOX=36845GN=HZF06_02605PE=4SV=1	tr|A0A7D6VW53|A0A7D6VW53_9CLOTPenicillin-bindingprotein2OS=ClostridiumintestinaleOX=36845GN=HZF06_02605PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	486.2541076540947	2	486.252903	970.491253	1.959	0.00095257	-0.19996	-9.7233E-05	1.759	0.00085533	486.25276463644144	52.494	0.90908	52.494	52.224	53.133	0					89	28	4	0	0	0	0.87803	2	22041	22041;22150		10.183	0	1	27604000			42665	16970	20885	20975	49342;49343	49342					0.004827037313702931
YFRAIVAA	8	Unmodified	_YFRAIVAA_					0	0	0			REV__nc|ENSG00000165949|P40305-4|IFI27	REV__nc|ENSG00000165949|P40305-4|IFI27	MSMS	GG20161007_CRH_Patient100_A02_01	1	304.1758911013603	3	304.176356	909.507237	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.153	1	82.153	81.653	82.653	0								0	0	0	1.0178	1	34223	34223		0	0	1		+		42666	10805	20886	20976	49344	49344					0.048864099682646156
YFRDGDLVTF	10	Unmodified	_YFRDGDLVTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.8019897341728	2	616.800946	1231.58734	0.56102	0.00034604	0.30889	0.00019052	0.86991	0.00053656	616.800925615666	52.909	0.32117	54.309	54.121	54.442	1.4005					16	9	2	0	0	0	0.58279	1	22127	22127		23.79	5.6434	1	1131900			42667	4605	20887	20977	49345	49345					-0.01919193219191584
YFRDGDLVTF	10	Unmodified	_YFRDGDLVTF_					0	0	0		ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	ENSG00000182179|ENST00000333486|UBA7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.8009521365166	2	616.800946	1231.58734	1.0608	0.00065432	-1.0052	-0.00062	0.05564	3.4319E-05	616.8005237298893	52.276	0.31177	54.248	54.168	54.48	1.9722					15	9	2	0	0	0	0.82019	1	21899	21899		10.074	0	1	1106100			42668	4605	20887	20977	49346	49346					-0.01919193219191584
YFRRDYHFV	9	Unmodified	_YFRRDYHFV_					0	0	0		tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8838989138603	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.073	1	53.073	52.573	53.573	0								0	0	0	0.42693	1	22132	22132		0.26902	0.033176	1				42669	16517	20888	20978	49347	49347					-0.008209586512748501
YFRRDYHFV	9	Unmodified	_YFRRDYHFV_					0	0	0		tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8832275271416	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.349	1	54.349	53.849	54.849	0								0	0	0	0.42693	1	22652	22652		0.26902	0.033176	1				42670	16517	20888	20978	49348	49348					-0.008209586512748501
YFRRDYHFV	9	Unmodified	_YFRRDYHFV_					0	0	0		tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8834411501884	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.717	1	54.717	54.217	55.217	0								0	0	0	0.42693	1	22800	22800		0.26902	0.033176	1				42671	16517	20888	20978	49349	49349					-0.008209586512748501
YFRRDYHFV	9	Unmodified	_YFRRDYHFV_					0	0	0		tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8827087283134	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.358	1	71.682	71.182	72.182	0.32359								0	0	0	0.42693	1	29864	29864		0.26902	0.033176	1				42672	16517	20888	20978	49350	49350					-0.008209586512748501
YFRRDYHFV	9	Unmodified	_YFRRDYHFV_					0	0	0		tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	tr|A0A553SQH0|A0A553SQH0_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07680PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8822814822197	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.188	1	38.005	37.505	38.505	1.8176								0	0	0	0.42693	1	15174	15174		0.26902	0.033176	1				42673	16517	20888	20978	49351	49351					-0.008209586512748501
YFRVLRPK	8	Unmodified	_YFRVLRPK_					0	0	0			REV__ENST00000560184.5_1_15:90408823-90437190:-|nuORF	REV__ENST00000560184.5_1_15:90408823-90437190:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2225524783134	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.1	1	20.158	19.658	20.658	1.0585								0	0	0	1.0178	1	7958	7958		1.6526	0	1		+		42674	13895	20889	20979	49352	49352					0.109017385676907
YFRYYKVNLKR	11	Unmodified	_YFRYYKVNLKR_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;nc|ENSG00000086619|Q86YB8-2|ERO1B;ENSG00000086619|ENST00000354619|ERO1B	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2940551638603	3	517.292782	1548.85652	2.0185	0.0010441	-0.030425	-1.5739E-05	1.988	0.0010284	517.2928532499682	42.65	1.3609	42.65	42.29	43.651	0					118	43	6	0	0	0	1.0388	2	17811	17811;17889		0.50596	0.09769	1	154400000			42675	5030	20890	20980	49353;49354	49353					0.10404365467979915
YFRYYKVNLKR	11	Unmodified	_YFRYYKVNLKR_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;nc|ENSG00000086619|Q86YB8-2|ERO1B;ENSG00000086619|ENST00000354619|ERO1B	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.6259643435478	3	517.292782	1548.85652	2.9093	0.001505	-0.27788	-0.00014375	2.6315	0.0013612	517.2927606315894	113.01	8.6059	113.05	111.44	120.05	0.044197					426	267	2	0	0	0	1.0388	2	50814	49483;50814		0.50596	0.09769	1	29803000			42676	5030	20890	20980	49355;49356	49356					0.10404365467979915
YFRYYKVNLKR	11	Unmodified	_YFRYYKVNLKR_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;nc|ENSG00000086619|Q86YB8-2|ERO1B;ENSG00000086619|ENST00000354619|ERO1B	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2932617068291	3	517.292782	1548.85652	1.9035	0.00098469	-0.73575	-0.0003806	1.1678	0.00060409	517.2926794022103	39.706	0.92395	41.568	41.247	42.171	1.8624					108	29	6	0	0	0	1.0388	1	16611	16611		0.50596	0	1	220690000			42677	5030	20890	20980	49357	49357					0.10404365467979915
YFRYYKVNLKR	11	Unmodified	_YFRYYKVNLKR_					0	0	0		ENSG00000197930|ENST00000395686|ERO1A;nc|ENSG00000086619|Q86YB8-2|ERO1B;ENSG00000086619|ENST00000354619|ERO1B	ENSG00000197930|ENST00000395686|ERO1A	ENSG00000197930|ENST00000395686|ERO1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.6277953982353	3	517.292782	1548.85652	3.2261	0.0016688	-3.2639	-0.0016884	-0.037763	-1.9535E-05	517.6251481523194	60.126	1.5741	62.091	61.033	62.607	1.9653					105	50	3	0	0	0	1.0388	1	25210	25210		0.50596	0	1	1827800			42678	5030	20890	20980	49358	49358					0.10404365467979915
YFTMDPSA	8	Unmodified	_YFTMDPSA_					0	0	0		ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1333190798759	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.231	1	85.483	84.983	85.983	0.25227								0	0	0	1.0178	1	35639	35639		1.6526	0	1				42679	7466	20891	20981	49359	49359					-0.08865518407935724
YFTMDPSA	8	Unmodified	_YFTMDPSA_					0	0	0		ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1333190798759	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.024	1	84.214	83.714	84.714	1.1901								0	0	0	1.0178	1	34851	34851		1.6526	0	1				42680	7466	20891	20981	49360	49360					-0.08865518407935724
YFTMDPSA	8	Unmodified	_YFTMDPSA_					0	0	0		ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	ENST00000588286.1_1_19:36036058-36036391:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1336547732353	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.585	1	86.181	85.681	86.681	1.5962								0	0	0	1.0178	1	35477	35477		1.6526	0	1				42681	7466	20891	20981	49361	49361					-0.08865518407935724
YFTPGSEM	8	Unmodified	_YFTPGSEM_					0	0	0		tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	311.1338378787041	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.456	1	35.731	35.231	36.231	1.2746								0	0	0	1.0178	1	14462	14462		0.45834	0	1				42682	16835	20892	20982	49362	49362					-0.08865518407912987
YFTPGSEM	8	Unmodified	_YFTPGSEM_					0	0	0		tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1346008181572	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.597	1	54.57	54.07	55.07	1.9722								0	0	0	1.0178	1	22035	22035		0.45834	0	1				42683	16835	20892	20982	49363	49363					-0.08865518407912987
YFTPGSEM	8	Unmodified	_YFTPGSEM_					0	0	0		tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1343871951103	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.694	1	54.666	54.166	55.166	1.9722								0	0	0	1.0178	1	22074	22074		0.45834	0	1				42684	16835	20892	20982	49364	49364					-0.08865518407912987
YFTPGSEM	8	Unmodified	_YFTPGSEM_					0	0	0		tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	tr|A0A7D6VRN7|A0A7D6VRN7_9CLOTPhzFfamilyphenazinebiosynthesisisomeraseOS=ClostridiumintestinaleOX=36845GN=HZF06_02890PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	311.1336852908134	3	311.133716	930.379319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.787	1	54.758	54.258	55.258	1.9711								0	0	0	1.0178	1	22113	22113		0.45834	0	1				42685	16835	20892	20982	49365	49365					-0.08865518407912987
YFTRVYWNRSY	11	Unmodified	_YFTRVYWNRSY_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	777.8818237185478	2	777.87805	1553.74155	0.52101	0.00040528	2.2557	0.0017547	2.7767	0.0021599	778.3816330213185	27.938	0.30634	29.217	29.059	29.366	1.2789					21	9	3	0	0	0	1.0362	1	11696	11696		1.3295	0	1	1805400			42686	3439	20893	20983	49366	49366					-0.013173637338240951
YFTRVYWNRSY	11	Unmodified	_YFTRVYWNRSY_					0	0	0		ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	ENSG00000156162|ENST00000414645|DPY19L4	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	777.87805	1553.74155	0.28784	0.0002239	2.3231	0.0018071	2.6109	0.002031	777.8800066967191	27.461	0.27876	29.237	29.047	29.326	1.7754	0.0097471	4.3264E-05	NaN	1.3295	23	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1653200			42687	3439	20893	20983							-0.013173637338240951
YFTSNSWVW	9	Unmodified	_YFTSNSWVW_					0	0	0		ENSG00000197601|ENST00000354817|FAR1;ENST00000427163.1_1_13:90823702-90823903:+|nuORF	ENSG00000197601|ENST00000354817|FAR1	ENSG00000197601|ENST00000354817|FAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	595.2699462771416	2	595.269281	1188.52401	2.565	0.0015269	-2.4196	-0.0014403	0.14544	8.6577E-05	595.268045937189	76.297	0.4207	77.591	77.341	77.762	1.2938					29	13	3	0	0	0	0.34572	1	32029	32029		23.148	11.508	1	2213600			42688	5016	20894	20984	49367	49367					-0.06271133936434126
YFTSNSWVW	9	Unmodified	_YFTSNSWVW_					0	0	0		ENSG00000197601|ENST00000354817|FAR1;ENST00000427163.1_1_13:90823702-90823903:+|nuORF	ENSG00000197601|ENST00000354817|FAR1	ENSG00000197601|ENST00000354817|FAR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	595.2686645388603	2	595.269281	1188.52401	2.7998	0.0016666	-3.3312	-0.0019829	-0.53139	-0.00031632	595.2671250993608	75.754	0.35608	77.521	77.333	77.689	1.7672					26	11	3	0	0	0	0.42305	1	31791	31791		19.257	6.7254	1	1652200			42689	5016	20894	20984	49368	49368					-0.06271133936434126
YFVTVVTLH	9	Unmodified	_YFVTVVTLH_					0	0	0			REV__ENSG00000178586|ENST00000641019|OR6B3	REV__ENSG00000178586|ENST00000641019|OR6B3	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2028991580009	3	360.20257	1077.58588	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.236	1	71.56	71.06	72.06	0.32359								0	0	0	0.42693	1	29815	29815		1.0715	0	1		+		42690	11249	20895	20985	49369	49369					0.05019217482708882
YFWIKRRILLL	11	Unmodified	_YFWIKRRILLL_					0	0	0		nc|ENSG00000162594|Q5VWK5-5|IL23R	nc|ENSG00000162594|Q5VWK5-5|IL23R	nc|ENSG00000162594|Q5VWK5-5|IL23R	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	304.2483703494072	5	304.995101	1519.93913	0.34242	0.00010444	0.10245	3.1247E-05	0.44488	0.00013568	305.19541973121227	38.252	0.21925	40.072	39.974	40.193	1.8202					9	6	2	0	0	0	0.14606	1	16033	16033		0	0	1	392380			42691	7907	20896	20986	49370	49370					0.19995307266776763
YFYDKYEDWWV	11	Unmodified	_YFYDKYEDWWV_					0	0	0			REV__ENSG00000109586|ENST00000265000|GALNT7	REV__ENSG00000109586|ENST00000265000|GALNT7	MSMS	GG20161007_CRH_Patient100_W632_01	3	807.2802001833916	2	807.351	1612.68745	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.978	1	98.206	97.706	98.706	0.22776								0	0	0	0.63775	1	41235	41235		0.35063	0.043601	1		+		42692	9274	20897	20987	49371	49371					-0.09439000676093201
YFYLNLLTI	9	Unmodified	_YFYLNLLTI_					0	0	0			REV__ENSG00000198763|ENST00000361453|MT-ND2	REV__ENSG00000198763|ENST00000361453|MT-ND2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	580.3259765505791	2	580.323525	1158.6325	2.8684	0.0016646	0.52314	0.00030359	3.3916	0.0019682	580.3237883134107	74.445	0.38324	76.241	76.051	76.434	1.7962					25	11	3	0	0	0	0.54523	1	31274	31274		13.508	1.8676	1	1733300	+		42693	11736	20898	20988	49372	49372					0.05952657313991949
YFYLNLLTI	9	Unmodified	_YFYLNLLTI_					0	0	0			REV__ENSG00000198763|ENST00000361453|MT-ND2	REV__ENSG00000198763|ENST00000361453|MT-ND2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	580.323525	1158.6325	2.8684	0.0016646	0.52314	0.00030359	3.3916	0.0019682	580.3237883134107	74.445	0.38324	76.241	76.051	76.434	1.7962	0.0055592	-0.0010816	NaN	13.508	25	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1733300	+		42694	11736	20898	20988							0.05952657313991949
YFYQFLREH	9	Unmodified	_YFYQFLREH_					0	0	0		ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8816711306572	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.25	1	110.41	109.91	110.91	0.15228								0	0	0	0.42693	1	47818	47818		0	0	1				42695	7266	20899	20989	49373	49373					-0.0194378074540964
YFYQFLREH	9	Unmodified	_YFYQFLREH_					0	0	0		ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8816406130791	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.53	1	110.68	110.18	111.18	0.15228								0	0	0	0.42693	1	47926	47926		0	0	1				42696	7266	20899	20989	49374	49374					-0.0194378074540964
YFYQFLREH	9	Unmodified	_YFYQFLREH_					0	0	0		ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	ENST00000550735.6_1_12:112337947-112339324:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8820373415947	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.62	1	110.77	110.27	111.27	0.15228								0	0	0	0.42693	1	47963	47963		0	0	1				42697	7266	20899	20989	49375	49375					-0.0194378074540964
YGDGGSGG	8	Unmodified	_YGDGGSGG_					0	0	0			REV__PUM1|p.G101D|1|0.14|ENSG00000134644|chr1:31059265-31059265|C/T|missense_variant	REV__PUM1|p.G101D|1|0.14|ENSG00000134644|chr1:31059265-31059265|C/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	335.1274902224541	2	335.127368	668.240183	2.0945	0.00070194	-0.79697	-0.00026709	1.2976	0.00043485	335.12676758899084	90.708	0.70585	90.917	90.616	91.321	0.20904					32	21	2	0	0	0	0.89178	1	38055	38055		0.69038	0	1	633700	+		42698	14608	20900	20990	49376	49376					-0.10720719981077309
YGDTCDVDGDC	11	Unmodified	_YGDTCDVDGDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1276428103447	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	55.196	1	55.517	55.017	56.017	0.32088								0	0	0	0.63775	1	23111	23111		0	0	1		+		42699	8818	20901	20991	49377	49377					-0.21517101920676396
YGDTCDVDGDC	11	Unmodified	_YGDTCDVDGDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1277648806572	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.02	1	68.342	67.842	68.842	0.32269								0	0	0	0.63775	1	28474	28474		0	0	1		+		42700	8818	20901	20991	49378	49378					-0.21517101920676396
YGDTCDVDGDC	11	Unmodified	_YGDTCDVDGDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1278259158134	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.179	1	75.504	75.004	76.004	0.32464								0	0	0	0.63775	1	31443	31443		0	0	1		+		42701	8818	20901	20991	49379	49379					-0.21517101920676396
YGDTCDVDGDC	11	Unmodified	_YGDTCDVDGDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_A02_02	2	388.1275512576103	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.302	1	85.554	85.054	86.054	0.25227								0	0	0	0.63775	1	35668	35668		0	0	1		+		42702	8818	20901	20991	49380	49380					-0.21517101920676396
YGDTCDVDGDC	11	Unmodified	_YGDTCDVDGDC_					0	0	0			REV__ENSG00000081479|ENST00000649046|LRP2	REV__ENSG00000081479|ENST00000649046|LRP2	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1281310915947	3	388.126961	1161.35905	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.756	1	73.58	73.08	74.08	1.824								0	0	0	0.63775	1	30103	30103		0	0	1		+		42703	8818	20901	20991	49381	49381					-0.21517101920676396
YGECSLER	8	Unmodified	_YGECSLER_					0	0	0			REV__nc|ENSG00000117114|O95490-3|ADGRL2	REV__nc|ENSG00000117114|O95490-3|ADGRL2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	478.7121154665947	2	478.710742	955.406931	2.3492	0.0011246	2.6539	0.0012704	5.0031	0.002395	478.7114674577834	68.402	0.4566	69.78	69.583	70.04	1.3778					34	14	3	0	0	0	0.83518	1	28736	28736		18.135	1.1927	1	6298800	+		42704	9491	20902	20992	49382	49382					-0.0725561514769879
YGFPSPIFL	9	Unmodified	_YGFPSPIFL_					0	0	0		nc|ENSG00000130958|Q76EJ3-2|SLC35D2;ENSG00000130958|ENST00000253270|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1040.551318347454	1	1040.54515	1039.53787	3.7184	0.0038692	-1.1028	-0.0011475	2.6156	0.0027217	1040.5441945711957	91.624	0.33775	92.561	92.34	92.678	0.93623					23	10	3	0	0	0	0.0082953	2	38522	38522;38570		109.63	38.914	1	5049500			42705	2473	20903	20993	49383;49384	49383					0.019681435626580424
YGFPSPIFL	9	Unmodified	_YGFPSPIFL_					0	0	0		nc|ENSG00000130958|Q76EJ3-2|SLC35D2;ENSG00000130958|ENST00000253270|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	520.7779418826103	2	520.776211	1039.53787	4.2902	0.0022342	-1.6143	-0.00084068	2.6759	0.0013935	520.7751097303976	91.553	0.2454	92.49	92.372	92.617	0.93623					19	7	4	0	0	0	0.052478	1	38562	38562		67.035	20.114	1	3120900			42706	2473	20903	20993	49385	49385					0.019681435626580424
YGFPSPIFL	9	Unmodified	_YGFPSPIFL_					0	0	0		nc|ENSG00000130958|Q76EJ3-2|SLC35D2;ENSG00000130958|ENST00000253270|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1040.551318347454	1	1040.54515	1039.53787	4.5614	0.0047463	0.14844	0.00015446	4.7098	0.0049008	1040.544861948964	91.122	0.34695	92.488	92.28	92.627	1.366					26	10	3	0	0	0	0.0017386	3	38360	38314;38360;38401		131.3	49.434	1	5227600			42707	2473	20903	20993	49386;49387;49388	49387					0.019681435626580424
YGFPSPIFL	9	Unmodified	_YGFPSPIFL_					0	0	0		nc|ENSG00000130958|Q76EJ3-2|SLC35D2;ENSG00000130958|ENST00000253270|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	nc|ENSG00000130958|Q76EJ3-2|SLC35D2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	520.7785522341728	2	520.776211	1039.53787	3.4789	0.0018117	0.15659	8.155E-05	3.6355	0.0018933	520.7758592899294	91.147	0.34695	92.513	92.28	92.627	1.366					22	10	3	0	0	0	0.10722	1	38353	38353		46.921	16.696	1	1535800			42708	2473	20903	20993	49389	49389					0.019681435626580424
YGFQNALI	8	Unmodified	_YGFQNALI_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	463.2432128787041	2	463.242535	924.470518	3.0781	0.0014259	-1.4993	-0.00069454	1.5788	0.00073137	463.2423060390037	59.512	0.23623	61.481	61.376	61.612	1.969					12	7	2	0	0	0	0.66111	1	24979	24979		34.187	9.5134	1	2721600		+	42709	341	20904	20994	49390	49390					0.005261133517251437
YGFQNALI	8	Unmodified	_YGFQNALI_					0	0	0		CON__P02769	CON__P02769	CON__P02769	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	463.242535	924.470518	2.7154	0.0012579	0.4774	0.00022115	3.1928	0.0014791	463.2428525908499	60.017	0.32969	61.437	61.267	61.597	1.4196	-0.02247	0.00047437	NaN	34.187	17	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1820200		+	42710	341	20904	20994							0.005261133517251437
YGFSGGGG	8	Unmodified	_YGFSGGGG_					0	0	0			REV__ENSG00000171403|ENST00000246662|KRT9	REV__ENSG00000171403|ENST00000246662|KRT9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	351.2380554080009	2	351.148104	700.281654	2.3366	0.00082051	0.83936	0.00029474	3.176	0.0011152	351.14852509142673	94.411	0.63068	94.556	94.293	94.924	0.14494					52	19	4	0	0	0	2.3239	1	39415	39415		0	0	1	4450800	+	+	42711	8382	20905	20995	49391	49391					-0.08047539221729494
YGFWYPKAFSP	11	Unmodified	_YGFWYPKAFSP_					0	0	0		ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	455.2202026247978	3	454.888763	1361.64446	0.68085	0.00030971	-2.8761	-0.0013083	-2.1953	-0.0009986	454.88767999809045	16.141	0.34608	16.141	15.962	16.309	0					24	10	3	0	0	0	0.95289	1	6698	6698		6.6235	2.2173	1	1853200			42712	4994	20906	20996	49392	49392					-0.021897259428214966
YGFWYPKAFSP	11	Unmodified	_YGFWYPKAFSP_					0	0	0		ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	455.2216064333916	3	454.888763	1361.64446	0.95587	0.00043481	-2.8844	-0.0013121	-1.9285	-0.00087726	454.88792856259766	16.003	0.2458	16.133	15.994	16.24	0.13022					17	7	3	0	0	0	0.9945	1	6640	6640		4.1166	1.6818	1	987900			42713	4994	20906	20996	49393	49393					-0.021897259428214966
YGFWYPKAFSP	11	Unmodified	_YGFWYPKAFSP_					0	0	0		ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	454.888763	1361.64446	0.41277	0.00018776	-2.2503	-0.0010236	-1.8375	-0.00083586	454.8884446127784	15.44	0.18609	16.267	16.138	16.324	0.82643	0.031944	0.0005902	NaN	6.6235	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	773660			42714	4994	20906	20996							-0.021897259428214966
YGFWYPKAFSP	11	Unmodified	_YGFWYPKAFSP_					0	0	0		ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	ENSG00000197296|ENST00000396825|FITM2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	454.888763	1361.64446	0.4432	0.00020161	-1.867	-0.00084927	-1.4238	-0.00064766	454.88860027796693	15.36	0.18649	16.399	16.272	16.458	1.0392	0.16434	0.0011133	NaN	6.6235	10	5	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	519620			42715	4994	20906	20996							-0.021897259428214966
YGGASAED	8	Unmodified	_YGGASAED_					0	0	0		tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	tr|A0A553ST55|A0A553ST55_NIACIM24familymetallopeptidaseOS=NialliacirculansOX=1397GN=CEQ21_04235PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	385.1530334353447	2	385.153583	768.292613	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.846	1	100.04	99.544	100.54	0.19767								0	0	0	1.0178	1	42027	42027		0.79363	0	1				42716	16639	20907	20997	49394	49394					-0.1008018163813631
YGGGFGGG	8	Unmodified	_YGGGFGGG_					0	0	0		CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1;tr|A0A7D6ZKF5|A0A7D6ZKF5_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23390PE=4SV=1;CON__P02535-1;ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;ENSG00000186442|ENST00000417996|KRT3;CON__P12035	CON__P08730-1;ENSG00000185069|ENST00000332411|KRT76;REV__ENSG00000171403|ENST00000246662|KRT9;ENSG00000186442|ENST00000417996|KRT3	CON__P08730-1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	670.4742309451103	1	671.278366	670.271089	2.6785	0.001798	1.2504	0.0008394	3.9289	0.0026374	671.2788817206547	104.63	0.099808	104.68	104.62	104.72	0.056801					6	4	2	0	0	0	2.3239	1	44186	44186		0	0	1	7242600		+	42717	346;353;8382;347	20908	20998	49395	49395					-0.0772352187617571
YGGGFGGG	8	Unmodified	_YGGGFGGG_					0	0	0		CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1;tr|A0A7D6ZKF5|A0A7D6ZKF5_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23390PE=4SV=1;CON__P02535-1;ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;ENSG00000186442|ENST00000417996|KRT3;CON__P12035	CON__P08730-1;ENSG00000185069|ENST00000332411|KRT76;REV__ENSG00000171403|ENST00000246662|KRT9;ENSG00000186442|ENST00000417996|KRT3	CON__P08730-1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	671.278366	670.271089	1.4694	0.00098635	1.73	0.0011613	3.1994	0.0021477	671.2790958886984	104.65	0.097557	104.65	104.6	104.7	0	-0.043889	0.00016708	NaN	0	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	7276800		+	42718	346;353;8382;347	20908	20998							-0.0772352187617571
YGGGFGGG	8	Unmodified	_YGGGFGGG_					0	0	0		CON__P08730-1;nc|ENSG00000171401|P13646-2|KRT13;nc|ENSG00000171401|P13646-3|KRT13;CON__ENSEMBL:ENSP00000377550;ENSG00000171401|ENST00000246635|KRT13;CON__P13646-1;tr|A0A7D6ZKF5|A0A7D6ZKF5_9CLOTTPMdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23390PE=4SV=1;CON__P02535-1;ENSG00000185069|ENST00000332411|KRT76;CON__Q01546;ENSG00000186442|ENST00000417996|KRT3;CON__P12035	CON__P08730-1;ENSG00000185069|ENST00000332411|KRT76;REV__ENSG00000171403|ENST00000246662|KRT9;ENSG00000186442|ENST00000417996|KRT3	CON__P08730-1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	671.278366	670.271089	2.9196	0.0019599	1.6151	0.0010842	4.5347	0.0030441	671.2794134470244	104.59	0.07283	104.76	104.7	104.77	0.16055	0.058523	8.9962E-05	NaN	0	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3954200		+	42719	346;353;8382;347	20908	20998							-0.0772352187617571
YGGGGGDS	8	Unmodified	_YGGGGGDS_					0	0	0		ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	335.1283447146416	2	335.127368	668.240183	3.3734	0.0011305	-0.14354	-4.8106E-05	3.2298	0.0010824	335.1268108202129	90.121	0.69971	91.14	90.769	91.468	1.0199					48	21	3	0	0	0	0.89176	1	37967	37967		0.79363	0	1	1064900			42720	7116	20909	20999	49396	49396					-0.10720719981088678
YGGGGGDS	8	Unmodified	_YGGGGGDS_					0	0	0		ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	335.1274597048759	2	335.127368	668.240183	3.8001	0.0012735	-0.50433	-0.00016901	3.2958	0.0011045	335.1266485645055	89.773	0.66225	91.178	90.858	91.52	1.4045					46	20	3	0	0	0	0.89176	1	37847	37847		0.79363	0	1	1021200			42721	7116	20909	20999	49397	49397					-0.10720719981088678
YGGGGGDS	8	Unmodified	_YGGGGGDS_					0	0	0		ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	ENST00000525329.1_1_11:6502313-6502430:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	335.127368	668.240183	-1.2539	-0.0004202	-0.013749	-4.6076E-06	-1.2676	-0.00042481	335.1272190628106	90.828	0.47334	90.828	90.651	91.125	0	-0.18789	0.00023227	NaN	0.79363	20	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467500			42722	7116	20909	20999							-0.10720719981088678
YGGGPGGG	8	Unmodified	_YGGGPGGG_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1351196169853	2	311.134996	620.255439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.17	1	112.21	111.71	112.71	0.04554								0	0	0	1.0178	1	48351	48351		0.79363	0	1				42723	2162	20910	21000	49398	49398					-0.06987808393228079
YGGGPGGG	8	Unmodified	_YGGGPGGG_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1353637576103	2	311.134996	620.255439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.4	1	112.45	111.95	112.95	0.04554								0	0	0	1.0178	1	48444	48444		0.79363	0	1				42724	2162	20910	21000	49399	49399					-0.06987808393228079
YGGGPGGG	8	Unmodified	_YGGGPGGG_					0	0	0		ENSG00000122566|ENST00000618183|HNRNPA2B1;ENST00000463181.5_1_7:26232138-26237376:-|nuORF;nc|ENSG00000122566|P22626|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	ENSG00000122566|ENST00000618183|HNRNPA2B1	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1344177126884	2	311.134996	620.255439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.93	1	118.98	118.48	119.48	0.041039								0	0	0	1.0178	1	51080	51080		0.79363	0	1				42725	2162	20910	21000	49400	49400					-0.06987808393228079
YGHELFLSL	9	Unmodified	_YGHELFLSL_					0	0	0			REV__tr|A0A7D6W2N5|A0A7D6W2N5_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07015PE=4SV=1	REV__tr|A0A7D6W2N5|A0A7D6W2N5_9CLOTClassISAM-dependentmethyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_07015PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	540.2806884646416	2	539.782025	1077.5495	0.7644	0.00041261	-1.8655	-0.001007	-1.1011	-0.00059435	540.2817302538158	58.13	0.3437	59.548	59.44	59.784	1.4181					18	11	2	0	0	0	0.19075	1	24370	24370		34.102	0	1	3699800	+		42726	15605	20911	21001	49401	49401					0.013823405859966442
YGKIFRMK	8	Unmodified	_YGKIFRMK_					0	0	0		ENST00000472970.1_1_20:52789446-52789947:-|nuORF;nc|ENSG00000019186|Q07973-2|CYP24A1;ENSG00000019186|ENST00000216862|CYP24A1	ENST00000472970.1_1_20:52789446-52789947:-|nuORF	ENST00000472970.1_1_20:52789446-52789947:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	348.2021057009697	3	348.200395	1041.57936	NaN	NaN	NaN	NaN	NaN	NaN	NaN	26.581	1	26.843	26.343	27.343	0.26173								0	0	0	1.0178	1	11112	11112		0.40072	0	1				42727	609	20912	21002	49402	49402					0.06023001050334642
YGLKKARR	8	Unmodified	_YGLKKARR_					0	0	0		tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2096130251884	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.132	1	63.462	62.962	63.962	0.32974								0	0	0	1.0178	1	26450	26450		0.45834	0	1				42728	17322	20913	21003	49403	49403					0.11300281390833788
YGLKKARR	8	Unmodified	_YGLKKARR_					0	0	0		tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2097350955009	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.329	1	63.658	63.158	64.158	0.32974								0	0	0	1.0178	1	26531	26531		0.45834	0	1				42729	17322	20913	21003	49404	49404					0.11300281390833788
YGLKKARR	8	Unmodified	_YGLKKARR_					0	0	0		tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2095519900322	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	63.494	1	63.823	63.323	64.323	0.32899								0	0	0	1.0178	1	26599	26599		0.45834	0	1				42730	17322	20913	21003	49405	49405					0.11300281390833788
YGLKKARR	8	Unmodified	_YGLKKARR_					0	0	0		tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	tr|A0A7D7ACY7|A0A7D7ACY7_9CLOTSmallribosomalsubunitproteinuS9OS=ClostridiumintestinaleOX=36845GN=rpsIPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	331.2095825076103	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.586	1	60.555	60.055	61.055	1.969								0	0	0	1.0178	1	24578	24578		0.45834	0	1				42731	17322	20913	21003	49406	49406					0.11300281390833788
YGLPVVVKL	9	Unmodified	_YGLPVVVKL_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	494.3182556033134	2	494.315503	986.616454	1.4374	0.00071053	3.6228	0.0017908	5.0602	0.0025013	494.3182682615021	65.753	0.4149	65.753	65.546	65.961	0					24	12	3	0	0	0	0.10993	2	27368	27368;27433		46.021	35.197	1	1242500			42732	4010	20914	21004	49407;49408	49407					0.12260995867757174
YGLPVVVKL	9	Unmodified	_YGLPVVVKL_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	494.3180419802666	2	494.315503	986.616454	2.5766	0.0012737	2.0089	0.00099302	4.5855	0.0022667	494.31731354147377	65.132	0.38402	65.459	65.29	65.674	0.32689					23	11	3	0	0	0	0.10993	2	27253	27253;27300		46.021	26.764	1	1601700			42733	4010	20914	21004	49409;49410	49409					0.12260995867757174
YGLPVVVKL	9	Unmodified	_YGLPVVVKL_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	494.3168823122978	2	494.315503	986.616454	2.2371	0.0011058	2.8189	0.0013934	5.056	0.0024992	494.3170397111604	63.852	0.44656	65.259	65.019	65.466	1.4071					38	13	4	0	0	0	0.042029	2	26769	26769;26807		74.423	50.402	1	8379400			42734	4010	20914	21004	49411;49412	49411					0.12260995867757174
YGLPVVVKL	9	Unmodified	_YGLPVVVKL_					0	0	0		ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	ENSG00000168036|ENST00000349496|CTNNB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3170959353447	2	494.315503	986.616454	2.4127	0.0011926	1.7397	0.00085997	4.1524	0.0020526	494.3166346225276	63.283	0.44445	65.227	64.997	65.441	1.9444					39	13	4	0	0	0	0.042029	2	26546	26546;26584		74.423	42.306	1	8549700			42735	4010	20914	21004	49413;49414	49413					0.12260995867757174
YGLRAKRKV	9	Unmodified	_YGLRAKRKV_					0	0	0		ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	ENSG00000050030|ENST00000055682|NEXMIF	MSMS	GG20161007_CRH_Patient100_W632_02	4	364.2334167361259	3	364.232975	1089.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.77	1	103.94	103.44	104.44	0.1731								0	0	0	0.42693	1	43773	43773		0.26902	0	1				42736	696	20915	21005	49415	49415					0.13584525970691175
YGMRFNLI	8	Unmodified	_YGMRFNLI_					0	0	0		DECR1|p.V237L|1|0.07|ENSG00000104325|chr8:90042771-90042771|G/T|missense_variant	DECR1|p.V237L|1|0.07|ENSG00000104325|chr8:90042771-90042771|G/T|missense_variant	DECR1|p.V237L|1|0.07|ENSG00000104325|chr8:90042771-90042771|G/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.8328124880791	2	507.265487	1012.51642	3.8962	0.0019764	2.4999	0.0012681	6.3962	0.0032446	507.26705660175213	81.515	0.33932	83.211	83.043	83.383	1.6959					14	10	2	0	0	0	2.3239	1	34191	34191		20.871	2.7362	1	421620			42737	402	20916	21006	49416	49416					0.010664352623052764
YGNFFEEYCY	10	Unmodified	_YGNFFEEYCY_					0	0	0		VILL|p.H39Y|1|0.04|ENSG00000136059|chr3:37993952-37993952|C/T|missense_variant	VILL|p.H39Y|1|0.04|ENSG00000136059|chr3:37993952-37993952|C/T|missense_variant	VILL|p.H39Y|1|0.04|ENSG00000136059|chr3:37993952-37993952|C/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	334.1070739626884	4	334.381311	1333.49614	-0.37375	-0.00012497	0.19034	6.3648E-05	-0.1834	-6.1327E-05	334.38162365911637	12.51	0.6466	12.599	12.402	13.049	0.089381					39	20	4	0	0	0	0.12561	1	5343	5343		0.13989	0.04505	1	2442100			42738	17355	20917	21007	49417	49417					-0.15726824978810328
YGPEARLRWYT	11	Unmodified	_YGPEARLRWYT_					0	0	0			REV__ENST00000579728.5_1_17:45885659-45892067:-|nuORF	REV__ENST00000579728.5_1_17:45885659-45892067:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.5744811892509	3	471.242088	1410.70443	0.080785	3.8069E-05	-3.2904	-0.0015506	-3.2097	-0.0015125	471.57515981581236	13.286	0.25053	14.013	13.882	14.133	0.72639					15	7	3	0	0	0	1.0254	1	5533	5533		2.2527	1.0379	1	379040	+		42739	8505	20918	21008	49418	49418					0.015509647204453358
YGQQPHLGTH	10	Unmodified	_YGQQPHLGTH_					0	0	0			REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	569.2774536013603	2	569.275429	1136.53631	0.6705	0.0003817	-0.49608	-0.0002824	0.17443	9.9297E-05	569.2754741267681	22.658	0.17462	22.658	22.548	22.722	0					9	5	2	0	0	0	0.74985	1	9421	9421		16.149	0	1	1901900	+		42740	13428	20919	21009	49419	49419					-0.026500974733835392
YGQQPHLGTH	10	Unmodified	_YGQQPHLGTH_					0	0	0			REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	REV__ENST00000491263.1_1_1:163043981-163044347:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	569.275429	1136.53631	0.6705	0.0003817	-0.49608	-0.0002824	0.17443	9.9297E-05	569.2754741267681	22.658	0.17462	22.658	22.548	22.722	0	0	0	NaN	16.149	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1901900	+		42741	13428	20919	21009							-0.026500974733835392
YGRKPLVV	8	Unmodified	_YGRKPLVV_					0	0	0		tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	466.8999511599541	2	466.28982	930.565087	1.7994	0.00083906	0.58422	0.00027242	2.3837	0.0011115	466.28987753746003	54.82	0.5602	56.225	55.995	56.555	1.4048					38	18	3	0	0	0	2.3239	1	22920	22920		19.439	2.3524	1	19616000			42742	16642	20920	21010	49420	49420					0.09702671893705883
YGRKPLVV	8	Unmodified	_YGRKPLVV_					0	0	0		tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	tr|A0A553ST80|A0A553ST80_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_04450PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	466.9014465212822	2	466.28982	930.565087	2.3049	0.0010747	-0.19209	-8.957E-05	2.1128	0.00098517	466.28961587789945	54.304	0.58195	56.273	56.001	56.583	1.9684					43	18	4	0	0	0	2.3239	1	22686	22686		19.439	2.3524	1	14359000			42743	16642	20920	21010	49421	49421					0.09702671893705883
YGRLLEVDLK	10	Unmodified	_YGRLLEVDLK_					0	0	0		nc|ENSG00000124193|Q13247-2|SRSF6;nc|ENSG00000124193|Q13247-3|SRSF6;ENSG00000124193|ENST00000244020|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	MSMS	GG20161007_CRH_Patient100_A02_01	1	603.3477661013603	2	603.348063	1204.68157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.77	1	99.77	99.27	100.27	0								0	0	0	0.66087	1	41764	41764		2.9952	0	1				42744	2214	20921	21011	49422	49422					0.08741945602923806
YGRLLEVDLK	10	Unmodified	_YGRLLEVDLK_					0	0	0		nc|ENSG00000124193|Q13247-2|SRSF6;nc|ENSG00000124193|Q13247-3|SRSF6;ENSG00000124193|ENST00000244020|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	nc|ENSG00000124193|Q13247-2|SRSF6	MSMS	GG20161007_CRH_Patient100_A02_02	2	603.3503295779228	2	603.348063	1204.68157	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.746	1	99.819	99.319	100.32	0.072716								0	0	0	0.65926	1	41765	41765		5.7319	1.7875	1				42745	2214	20921	21011	49423	49423					0.08741945602923806
YGRRKQYP	8	Unmodified	_YGRRKQYP_					0	0	0		nc|ENSG00000215301|O00571-2|DDX3X;nc|ENSG00000067048|O15523-2|DDX3Y;ENSG00000067048|ENST00000336079|DDX3Y;ENSG00000215301|ENST00000644876|DDX3X;ENST00000463199.1_1_Y:15025644-15026909:+|nuORF;nc|ENSG00000067048|O15523-3|DDX3Y	nc|ENSG00000215301|O00571-2|DDX3X	nc|ENSG00000215301|O00571-2|DDX3X	MSMS	GG20161007_CRH_Patient100_A02_01	1	534.2924072146416	2	534.290882	1066.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.6	1	103.6	103.1	104.1	0								0	0	0	1.0178	1	43528	43528		2.5775	0	1				42746	815	20922	21012	49424	49424					0.03659100631534784
YGRRSCCS	8	Unmodified	_YGRRSCCS_					0	0	0		ENST00000286186.10_1_2:202050714-202052472:+|nuORF	ENST00000286186.10_1_2:202050714-202052472:+|nuORF	ENST00000286186.10_1_2:202050714-202052472:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1361877322197	3	311.133945	930.380005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.129	1	99.209	98.709	99.709	0.080376								0	0	0	1.0178	1	41501	41501		1.6526	0	1				42747	5713	20923	21013	49425	49425					-0.08797002239862195
YGRRSCCS	8	Unmodified	_YGRRSCCS_					0	0	0		ENST00000286186.10_1_2:202050714-202052472:+|nuORF	ENST00000286186.10_1_2:202050714-202052472:+|nuORF	ENST00000286186.10_1_2:202050714-202052472:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1357604861259	3	311.133945	930.380005	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.311	1	99.391	98.891	99.891	0.080376								0	0	0	1.0178	1	41579	41579		1.6526	0	1				42748	5713	20923	21013	49426	49426					-0.08797002239862195
YGTCSNCEQK	10	Unmodified	_YGTCSNCEQK_					0	0	0		tr|A0A553SFL9|A0A553SFL9_NIACITranscriptionalrepressorOS=NialliacirculansOX=1397GN=CEQ21_09120PE=3SV=1	tr|A0A553SFL9|A0A553SFL9_NIACITranscriptionalrepressorOS=NialliacirculansOX=1397GN=CEQ21_09120PE=3SV=1	tr|A0A553SFL9|A0A553SFL9_NIACITranscriptionalrepressorOS=NialliacirculansOX=1397GN=CEQ21_09120PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	566.7216674685478	2	566.723523	1131.43249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.942	1	15.942	15.442	16.442	0								0	0	0	0.64534	1	6620	6620		18.373	1.2602	1				42749	16064	20924	21014	49427	49427					-0.12796508687574715
YGTKALAK	8	Unmodified	_YGTKALAK_					0	0	0			REV__tr|A0A553SKI1|A0A553SKI1_NIACIDNApolymeraseIIIsubunitdeltaOS=NialliacirculansOX=1397GN=holAPE=4SV=1	REV__tr|A0A553SKI1|A0A553SKI1_NIACIDNApolymeraseIIIsubunitdeltaOS=NialliacirculansOX=1397GN=holAPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	851.4996826052666	1	851.498529	850.491253	2.9609	0.0025212	-0.24307	-0.00020697	2.7178	0.0023142	851.4975361401467	106.91	0.090958	107.07	107.03	107.12	0.15781					6	3	2	0	0	0	0.89178	1	45885	45885		0.69038	0	1	20261000	+		42750	14953	20925	21015	49428	49428					0.060027037313602705
YGTKALAK	8	Unmodified	_YGTKALAK_					0	0	0			REV__tr|A0A553SKI1|A0A553SKI1_NIACIDNApolymeraseIIIsubunitdeltaOS=NialliacirculansOX=1397GN=holAPE=4SV=1	REV__tr|A0A553SKI1|A0A553SKI1_NIACIDNApolymeraseIIIsubunitdeltaOS=NialliacirculansOX=1397GN=holAPE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	851.498529	850.491253	2.9609	0.0025212	-0.24307	-0.00020697	2.7178	0.0023142	851.4975361401467	106.91	0.090958	107.07	107.03	107.12	0.15781	-0.0027838	-0.0002501	NaN	0.69038	6	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	20261000	+		42751	14953	20925	21015							0.060027037313602705
YGTKIKAKK	9	Unmodified	_YGTKIKAKK_					0	0	0			REV__ENST00000603132.1_1_12:55196819-55197167:-|nuORF	REV__ENST00000603132.1_1_12:55196819-55197167:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	346.2226440310478	3	346.221965	1035.64407	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.48	1	103.65	103.15	104.15	0.16445								0	0	0	0.42693	1	43634	43634		1.0715	0	1		+		42752	14124	20926	21016	49429	49429					0.12766899127996112
YGVHLEAI	8	Unmodified	_YGVHLEAI_					0	0	0			REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1650573611259	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.558	1	83.828	83.328	84.328	0.27029								0	0	0	1.0178	1	34946	34946		0.45834	0	1		+		42753	15209	20927	21017	49430	49430					0.016301133517231392
YGVHLEAI	8	Unmodified	_YGVHLEAI_					0	0	0			REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1652404665947	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.676	1	83.947	83.447	84.447	0.27029								0	0	0	1.0178	1	34996	34996		0.45834	0	1		+		42754	15209	20927	21017	49431	49431					0.016301133517231392
YGVHLEAI	8	Unmodified	_YGVHLEAI_					0	0	0			REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1648132205009	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.797	1	84.067	83.567	84.567	0.27029								0	0	0	1.0178	1	35048	35048		0.45834	0	1		+		42755	15209	20927	21017	49432	49432					0.016301133517231392
YGVHLEAI	8	Unmodified	_YGVHLEAI_					0	0	0			REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	REV__tr|A0A553SSP3|A0A553SSP3_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_03305PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	301.1653015017509	3	301.164116	900.470518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.914	1	84.175	83.675	84.675	0.26083								0	0	0	1.0178	1	35099	35099		0.45834	0	1		+		42756	15209	20927	21017	49433	49433					0.016301133517231392
YGWVYELYNQD	11	Unmodified	_YGWVYELYNQD_					0	0	0			REV__ENST00000313640.11_1_13:43460845-43460983:-|nuORF	REV__ENST00000313640.11_1_13:43460845-43460983:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	725.3220092654228	2	725.319699	1448.62485	1.8988	0.0013772	2.8356	0.0020567	4.7343	0.0034339	725.3221101303726	77.559	0.18949	78.84	78.76	78.95	1.2809					8	5	2	0	0	0	0.92747	1	32563	32563		8.1555	0.54658	1	613570	+		42757	12377	20928	21018	49434	49434					-0.08152146744214406
YGYEHILTL	9	Unmodified	_YGYEHILTL_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7884399294853	2	554.787307	1107.56006	1.4972	0.00083065	0.56557	0.00031377	2.0628	0.0011444	554.7875767985265	54.874	0.67777	56.279	55.964	56.642	1.4048					56	22	4	0	0	0	0.00090036	3	22946	22900;22946;22989		133.7	66.358	1	18447000			42758	2890	20929	21019	49435;49436;49437	49436					0.010583232404314913
YGYEHILTL	9	Unmodified	_YGYEHILTL_					0	0	0		ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	ENSG00000139719|ENST00000267199|VPS33A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	554.7885619997978	2	554.787307	1107.56006	1.9563	0.0010853	-0.071776	-3.982E-05	1.8845	0.0010455	554.7871947176308	54.39	0.5508	56.358	56.032	56.583	1.9684					51	17	4	0	0	0	0.00090036	3	22775	22727;22775;22832		133.7	76.231	1	16160000			42759	2890	20929	21019	49438;49439;49440	49439					0.010583232404314913
YGYQQGLLL	9	Unmodified	_YGYQQGLLL_					0	0	0			REV__tr|A0A553SQ75|A0A553SQ75_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_22305PE=4SV=1	REV__tr|A0A553SQ75|A0A553SQ75_NIACIDHA2familyeffluxMFStransporterpermeasesubunitOS=NialliacirculansOX=1397GN=CEQ21_22305PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7838622927666	2	527.782025	1053.5495	0.56049	0.00029582	1.5279	0.0008064	2.0884	0.0011022	527.7830984700871	32.884	0.24436	34.163	34.027	34.271	1.2782					14	8	2	0	0	0	0.12174	1	13816	13816		42.095	0.13901	1	2064100	+		42760	15124	20930	21020	49441	49441					0.024863405860060084
YGYSNPKIL	9	Unmodified	_YGYSNPKIL_					0	0	0		ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7834350466728	2	527.782025	1053.5495	0.56049	0.00029582	1.5279	0.0008064	2.0884	0.0011022	527.7830984700871	32.884	0.24436	34.163	34.027	34.271	1.2782					14	8	2	0	0	0	0.1109	1	13769	13769		45.7	9.6554	1	2064100			42761	4453	20931	21021	49442	49442					0.024863405860060084
YGYSNPKIL	9	Unmodified	_YGYSNPKIL_					0	0	0		ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	ENSG00000177606|ENST00000371222|JUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7823974490166	2	527.782025	1053.5495	0.95853	0.00050589	0.98558	0.00052017	1.9441	0.0010261	527.782365559317	32.339	0.30178	34.163	33.972	34.273	1.8246					21	9	3	0	0	0	0.099302	2	13577	13529;13577		49.554	13.51	1	1769800			42762	4453	20931	21021	49443;49444	49444					0.024863405860060084
YGYSWFLINK	10	Unmodified	_YGYSWFLINK_					0	0	0		tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	tr|A0A7D6VQN0|A0A7D6VQN0_9CLOTPTSsystemmannose/fructose/sorbosefamilytransportersubunitIIDOS=ClostridiumintestinaleOX=36845GN=HZF06_04035PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8891784548759	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	27.695	1	27.695	27.195	28.195	0								0	0	0	0.66222	1	11584	11584		0.69767	0	1				42763	16804	20932	21022	49445	49445					0.011222740571838585
YHAGPAAAC	9	Unmodified	_YHAGPAAAC_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	430.8891174197197	2	430.689613	859.364672	2.2959	0.0009888	-0.93765	-0.00040383	1.3582	0.00058497	430.68919210853744	65.732	0.37793	66.059	65.833	66.211	0.32689					20	11	2	0	0	0	0.11957	1	27578	27578		0	0	1	1021300	+		42764	11082	20933	21023	49446	49446					-0.07063545765424806
YHAGPAAAC	9	Unmodified	_YHAGPAAAC_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	430.689613	859.364672	3.212	0.0013834	-2.0905	-0.00090036	1.1215	0.00048303	430.6890033562345	64.689	0.24693	66.096	66.016	66.263	1.4071	0.02321	-0.0013742	NaN	0	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	608320	+		42765	11082	20933	21023							-0.07063545765424806
YHAGPAAAC	9	Unmodified	_YHAGPAAAC_					0	0	0			REV__ENSG00000173065|ENST00000581407|FAM222B	REV__ENSG00000173065|ENST00000581407|FAM222B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	430.689613	859.364672	2.4375	0.0010498	0.70677	0.0003044	3.1443	0.0013542	430.6894529920763	64.323	0.24867	66.251	66.108	66.356	1.928	0.17818	0.0010353	NaN	0	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	490630	+		42766	11082	20933	21023							-0.07063545765424806
YHFWEEFYSK	10	Unmodified	_YHFWEEFYSK_					0	0	0		ENSG00000135220|ENST00000251566|UGT2A3	ENSG00000135220|ENST00000251566|UGT2A3	ENSG00000135220|ENST00000251566|UGT2A3	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	478.8798095583916	3	479.215427	1434.62445	0.94969	0.00045511	-3.8799	-0.0018593	-2.9302	-0.0014042	479.21455730522865	16.165	0.31592	16.165	16.024	16.34	0					12	9	2	0	0	0	0.12547	1	6696	6696		3.8763	1.4415	1	1199300			42767	2651	20934	21024	49447	49447					-0.07547521673427582
YHKWRIYYKKR	11	Unmodified	_YHKWRIYYKKR_					0	0	0		nc|ENSG00000009950|Q9NP71-5|MLXIPL;nc|ENSG00000009950|Q9NP71-4|MLXIPL;nc|ENSG00000009950|Q9NP71-2|MLXIPL;nc|ENSG00000009950|Q9NP71-3|MLXIPL;ENSG00000009950|ENST00000313375|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	547.6462890505791	3	547.643927	1639.90995	1.5811	0.00086587	2.9841	0.0016342	4.5652	0.0025001	547.6461252035742	38.706	0.26513	39.014	38.857	39.122	0.30857					19	8	3	0	0	0	1.0402	1	16269	16269		0.08335	0	1	1168600			42768	541	20935	21025	49448	49448					0.1155916297047952
YHKWRIYYKKR	11	Unmodified	_YHKWRIYYKKR_					0	0	0		nc|ENSG00000009950|Q9NP71-5|MLXIPL;nc|ENSG00000009950|Q9NP71-4|MLXIPL;nc|ENSG00000009950|Q9NP71-2|MLXIPL;nc|ENSG00000009950|Q9NP71-3|MLXIPL;ENSG00000009950|ENST00000313375|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	nc|ENSG00000009950|Q9NP71-5|MLXIPL	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	547.643927	1639.90995	1.3403	0.000734	4.3197	0.0023656	5.6599	0.0030996	547.6464347838961	39.225	0.40549	39.225	38.984	39.39	0	0.10537	0.00099327	NaN	0.08335	28	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2450100			42769	541	20935	21025							0.1155916297047952
YHKYYHYL	8	Unmodified	_YHKYYHYL_					0	0	0		ENSG00000182197|ENST00000378204|EXT1	ENSG00000182197|ENST00000378204|EXT1	ENSG00000182197|ENST00000378204|EXT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	594.2883178591728	2	593.787641	1185.56073	2.4776	0.0014711	-3.2087	-0.0019053	-0.73119	-0.00043417	593.7855723018005	74.742	1.2888	75.066	74.327	75.616	0.32464					74	40	2	0	0	0	0.88958	1	31052	31052		2.8892	0.31174	1	1196800			42770	4607	20936	21026	49449	49449					-0.024628373198765985
YHLMPVRMV	9	2 Oxidation (M)	_YHLM(Oxidation (M))PVRM(Oxidation (M))V_		YHLM(1)PVRM(1)V		YHLM(60)PVRM(60)V	0	0	2		L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|183|3|sense	L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|183|3|sense	L1PA7_dup6474|chr8:106560725-106567124:+|1.632823151869906|0.1128517605864482|3.85|427.0|183|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.2959472537041	2	589.296462	1176.57837	1.8341	0.0010808	-1.9984	-0.0011777	-0.16435	-9.6852E-05	589.2950034183274	42.536	0.44344	43.876	43.602	44.046	1.3399					33	13	3	0	0	0	0.069258	1	17834	17834		60.39	16.531	1	7173400			42771	7762	20937	21027	49450	49450		113;114			-0.0028558138085372775
YHLRLHRHNRL	11	Unmodified	_YHLRLHRHNRL_					0	0	0			REV__chr10:103585356-103589514|104|23.06|0.33|6.11|+|1|None,NEURL1|1	REV__chr10:103585356-103589514|104|23.06|0.33|6.11|+|1|None,NEURL1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	757.9338867068291	2	757.931817	1513.84908	2.7636	0.0020946	0.47258	0.00035819	3.2362	0.0024528	757.9319678541312	87.043	0.851	87.043	86.612	87.463	0					100	34	3	0	0	0	1.0405	5	36145	36145;36196;36247;36313;36391		0	0	1	555940000	+		42772	8230	20938	21028	49451;49452;49453;49454;49455	49451					0.11271070710927233
YHLRLHRHNRL	11	Unmodified	_YHLRLHRHNRL_					0	0	0			REV__chr10:103585356-103589514|104|23.06|0.33|6.11|+|1|None,NEURL1|1	REV__chr10:103585356-103589514|104|23.06|0.33|6.11|+|1|None,NEURL1|1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	757.9340698122978	2	757.931817	1513.84908	2.5666	0.0019453	0.38336	0.00029056	2.95	0.0022359	757.9323700264642	86.917	0.89062	87.161	86.606	87.496	0.24387					229	35	7	0	0	0	1.0405	4	36229	36229;36354;36420;36475		0	0	1	600830000	+		42773	8230	20938	21028	49456;49457;49458;49459	49456					0.11271070710927233
YHLSGTES	8	Unmodified	_YHLSGTES_					0	0	0		tr|A0A553STZ8|A0A553STZ8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06035PE=4SV=1	tr|A0A553STZ8|A0A553STZ8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06035PE=4SV=1	tr|A0A553STZ8|A0A553STZ8_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_06035PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	893.4039794802666	1	893.399938	892.392661	1.147	0.0010247	1.5	0.0013401	2.6469	0.0023648	893.4023735863243	104.87	0.074341	104.87	104.83	104.9	0					10	3	4	0	0	0	0.89008	1	44381	44381		2.5775	0	1	46871000			42774	16675	20939	21029	49460	49460					-0.05783944304312172
YHMPCPPG	8	Unmodified	_YHMPCPPG_					0	0	0		ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	ENSG00000000938|ENST00000374005|FGR	MSMS	GG20161007_CRH_Patient100_W632_01	3	301.1273681521416	3	301.12802	900.362229	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.176	1	35.45	34.95	35.95	1.2746								0	0	0	1.0178	1	14345	14345		0.45834	0.057624	1				42775	453	20940	21030	49461	49461					-0.09193717494724751
YHQRRHTGEM	10	Unmodified	_YHQRRHTGEM_					0	0	0		ENSG00000196267|ENST00000682614|ZNF836;nc|ENSG00000197608|Q6ZN19|ZNF841;ENSG00000197608|ENST00000594440|ZNF841	ENSG00000196267|ENST00000682614|ZNF836	ENSG00000196267|ENST00000682614|ZNF836	MSMS	GG20161007_CRH_Patient100_W632_02	4	438.8755065798759	3	438.875522	1313.60474	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.94	110.44	111.44	0.15228								0	0	0	0.66264	1	48031	48031		0	0	1				42776	4929	20941	21031	49462	49462					-0.0395217616521677
YHRRYDFFV	9	Unmodified	_YHRRYDFFV_					0	0	0		nc|ENSG00000132294|Q14156-3|EFR3A;nc|ENSG00000132294|Q14156-2|EFR3A;ENSG00000132294|ENST00000254624|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	nc|ENSG00000132294|Q14156-3|EFR3A	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828002810478	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9877	1	2.7361	2.2361	3.2361	0.7484								0	0	0	0.42693	1	824	824		0.26902	0.1097	1				42777	2522	20942	21032	49463	49463					-0.008209586512748501
YHSAHDEP	8	Unmodified	_YHSAHDEP_					0	0	0		ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant;ENSG00000204186|ENST00000374423|ZDBF2	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	319.1350890994072	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.5	1	16.327	15.827	16.827	0.82643								0	0	0	1.0178	1	6442	6442		4.3292	0.38484	1				42778	5127	20943	21033	49464	49464					-0.0958571258986467
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_A02_02	2	319.1364318728447	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.265	1	16.396	15.896	16.896	0.13022								0	0	0	1.0178	1	6751	6751		1.8442	0	1		+		42779	14386	20944	21034	49465	49465					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_A02_02	2	319.1366149783134	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.38	1	16.51	16.01	17.01	0.13022								0	0	0	1.0178	1	6798	6798		1.8442	0	1		+		42780	14386	20944	21034	49466	49466					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_01	3	319.1352111697197	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.899	1	16.726	16.226	17.226	0.82643								0	0	0	1.0178	1	6609	6609		1.8442	0	1		+		42781	14386	20944	21034	49467	49467					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_01	3	319.1360046267509	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.077	1	16.904	16.404	17.404	0.82643								0	0	0	1.0178	1	6684	6684		1.8442	0	1		+		42782	14386	20944	21034	49468	49468					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1348449587822	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.51	1	16.549	16.049	17.049	1.0392								0	0	0	1.0178	1	6434	6434		1.8442	0	1		+		42783	14386	20944	21034	49469	49469					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1352111697197	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.758	1	16.797	16.297	17.297	1.0392								0	0	0	1.0178	1	6539	6539		1.8442	0	1		+		42784	14386	20944	21034	49470	49470					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1359741091728	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	15.877	1	16.916	16.416	17.416	1.0392								0	0	0	1.0178	1	6589	6589		1.8442	0	1		+		42785	14386	20944	21034	49471	49471					-0.09585712589853301
YHSSGYNQ	8	Unmodified	_YHSSGYNQ_					0	0	0			REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	REV__nc|ENSG00000049192|Q9UKP5-2|ADAMTS6	MSMS	GG20161007_CRH_Patient100_W632_02	4	319.1356384158134	3	319.134996	954.383159	NaN	NaN	NaN	NaN	NaN	NaN	NaN	16.005	1	17.045	16.545	17.545	1.0392								0	0	0	1.0178	1	6643	6643		1.8442	0	1		+		42786	14386	20944	21034	49472	49472					-0.09585712589853301
YHVIIPRG	8	Unmodified	_YHVIIPRG_					0	0	0			REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1550170779228	3	318.855505	953.544686	0.20224	6.4486E-05	2.4927	0.00079481	2.6949	0.0008593	318.85616736410105	25.5	0.15262	25.752	25.675	25.827	0.25197					6	4	2	0	0	0	2.3239	1	10662	10662		0.45834	0	1	249410	+		42787	15055	20945	21035	49473	49473					0.06605501233900668
YHVIIPRG	8	Unmodified	_YHVIIPRG_					0	0	0			REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	318.2279540896416	3	318.855505	953.544686	-0.13571	-4.3272E-05	3.2928	0.0010499	3.1571	0.0010067	318.8562904202961	22.709	0.17733	24.36	24.259	24.436	1.6511					10	5	3	0	0	0	2.3239	1	9489	9489		1.8442	0	1	339190	+		42788	15055	20945	21035	49474	49474					0.06605501233900668
YIAGFFLTV	9	Unmodified	_YIAGFFLTV_					0	0	0		VCL-ADK|9|fusion;VCL-ADK|11|fusion;VCL-ADK|7|fusion;nc|ENSG00000156110|P55263-4|ADK;nc|ENSG00000156110|P55263-2|ADK;ENSG00000156110|ENST00000539909|ADK	VCL-ADK|9|fusion	VCL-ADK|9|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1030.562670886517	1	1030.5608	1029.55352	3.9626	0.0040837	-1.0732	-0.001106	2.8894	0.0029777	1030.5597849487447	91.232	0.7181	92.598	92.342	93.06	1.366					45	22	3	0	0	0	0.070759	2	38413	38413;38486		59.795	5.0217	1	4652400			42789	17353	20946	21036	49475;49476	49475					0.03992430079688347
YIANIKLDSL	10	Unmodified	_YIANIKLDSL_					0	0	0			REV__tr|A0A553SLE7|A0A553SLE7_NIACIReversetranscriptase-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_20360PE=4SV=1	REV__tr|A0A553SLE7|A0A553SLE7_NIACIReversetranscriptase-likeproteinOS=NialliacirculansOX=1397GN=CEQ21_20360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3322021365166	2	575.329339	1148.64412	3.0406	0.0017493	0.69927	0.00040231	3.7398	0.0021516	575.3298588818783	64.81	0.27734	66.217	66.079	66.356	1.4071					18	8	3	0	0	0	0.21003	1	27189	27189		47.749	0	1	3194500	+		42790	14983	20947	21037	49477	49477					0.07574854337326542
YICSKCGKAF	10	Unmodified	_YICSKCGKAF_					0	0	0		ENSG00000245680|ENST00000532828|ZNF585B;ENSG00000196967|ENST00000292841|ZNF585A	ENSG00000245680|ENST00000532828|ZNF585B	ENSG00000245680|ENST00000532828|ZNF585B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.2726928591728	2	560.269912	1118.52527	1.8548	0.0010392	2.5301	0.0014175	4.3849	0.0024567	560.2711636138044	45.847	0.24936	47.222	47.116	47.365	1.3751					13	7	2	0	0	0	0.85124	1	19239	19239		6.7232	0.96273	1	626530			42791	5366	20948	21038	49478	49478					-0.029249591635334582
YIDACKFSDF	10	Unmodified	_YIDACKFSDF_					0	0	0			REV__nc|ENSG00000135503|P36896-2|ACVR1B	REV__nc|ENSG00000135503|P36896-2|ACVR1B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7689697146416	2	604.768257	1207.52196	1.6839	0.0010184	0.59347	0.00035891	2.2774	0.0013773	604.7686095550388	46.454	0.61498	48.424	48.126	48.741	1.9703					63	19	4	0	0	0	0.80568	1	19558	19558		11.64	1.5664	1	9278900	+		42792	9943	20949	21039	49479	49479					-0.07349930736563692
YIDDVFHAL	9	Unmodified	_YIDDVFHAL_					0	0	0		nc|ENSG00000143622|Q92963-2|RIT1;ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-3|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	546.7717773318291	2	546.771657	1091.52876	1.8777	0.0010267	0.38061	0.00020811	2.2583	0.0012348	546.7715106160808	62.399	0.15334	62.729	62.635	62.788	0.32974					7	4	2	0	0	0	0.54523	1	26147	26147		13.508	6.2187	1	258280			42793	3043	20950	21040	49480	49480					-0.013342497936719155
YIDDVFHAL	9	Unmodified	_YIDDVFHAL_					0	0	0		nc|ENSG00000143622|Q92963-2|RIT1;ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-3|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	547.3326293826103	2	546.771657	1091.52876	3.134	0.0017136	1.4608	0.0007987	4.5948	0.0025123	546.772432852377	60.719	0.27351	62.685	62.577	62.85	1.9653					12	8	2	0	0	0	0.10306	1	25513	25513		19.439	9.2556	1	1123800			42794	3043	20950	21040	49481	49481					-0.013342497936719155
YIDDVFHAL	9	Unmodified	_YIDDVFHAL_					0	0	0		nc|ENSG00000143622|Q92963-2|RIT1;ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-3|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	546.771657	1091.52876	1.8042	0.00098647	1.1751	0.00064249	2.9792	0.001629	547.2736443649	62.91	0.24667	62.91	62.77	63.017	0	0.1645	-6.6799E-05	NaN	26.341	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	457410			42795	3043	20950	21040							-0.013342497936719155
YIDDVFHAL	9	Unmodified	_YIDDVFHAL_					0	0	0		nc|ENSG00000143622|Q92963-2|RIT1;ENSG00000143622|ENST00000368323|RIT1;nc|ENSG00000143622|Q92963-3|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	nc|ENSG00000143622|Q92963-2|RIT1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	546.771657	1091.52876	2.8892	0.0015798	4.7278	0.002585	7.617	0.0041648	546.7740829761022	61.239	0.36716	62.658	62.408	62.775	1.4184	-0.087572	0.0038183	NaN	26.341	17	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1401900			42796	3043	20950	21040							-0.013342497936719155
YIDEMWYELNN	11	Unmodified	_YIDEMWYELNN_					0	0	0			REV__ENST00000559272.1_1_15:79756054-79760723:+|nuORF	REV__ENST00000559272.1_1_15:79756054-79760723:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	745.8220703005791	2	745.318842	1488.62313	1.802	0.0013431	1.6228	0.0012095	3.4248	0.0025525	745.3210420417827	72.292	0.30922	73.621	73.423	73.732	1.3297					23	9	3	0	0	0	1.0084	1	30378	30378		3.2813	0	1	1754500	+		42797	10943	20951	21041	49482	49482					-0.1016352382448531
YIDEMWYELNN	11	Unmodified	_YIDEMWYELNN_					0	0	0			REV__ENST00000559272.1_1_15:79756054-79760723:+|nuORF	REV__ENST00000559272.1_1_15:79756054-79760723:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	745.3218871951103	2	745.318842	1488.62313	2.0054	0.0014947	0.31082	0.00023166	2.3163	0.0017263	745.319783398447	71.947	0.27472	73.771	73.57	73.845	1.824					17	8	3	0	0	0	1.0131	1	30180	30180		2.9952	0	1	2712300	+		42798	10943	20951	21041	49483	49483					-0.1016352382448531
YIDGFRHIQKI	11	Unmodified	_YIDGFRHIQKI_					0	0	0		ENST00000493465.5_1_3:50385212-50386210:-|nuORF;ENST00000467294.1_1_3:50386114-50386411:-|nuORF;ENST00000461020.5_1_3:50386114-50386910:-|nuORF;nc|ENSG00000114388|Q8WTW4-2|NPRL2;ENST00000429366.5_1_3:50385517-50386910:-|nuORF;ENST00000487632.5_1_3:50385039-50386411:-|nuORF;ENSG00000114388|ENST00000232501|NPRL2	ENST00000493465.5_1_3:50385212-50386210:-|nuORF	ENST00000493465.5_1_3:50385212-50386210:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	464.1868163943291	3	463.9261	1388.75647	1.0692	0.00049602	-2.5616	-0.0011884	-1.4924	-0.00069237	463.92552607214907	28.97	0.3315	30.768	30.657	30.989	1.7987					22	10	3	0	0	0	0.14606	1	12178	12178		0.094841	0	1	1320100			42799	1861	20952	21042	49484	49484					0.07764128134181192
YIDKFHYY	8	Unmodified	_YIDKFHYY_					0	0	0			REV__tr|A0A7D6VRZ8|A0A7D6VRZ8_9CLOTTetR/AcrRfamilytranscriptionalregulatorC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14055PE=4SV=1	REV__tr|A0A7D6VRZ8|A0A7D6VRZ8_9CLOTTetR/AcrRfamilytranscriptionalregulatorC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_14055PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.2787353396416	2	574.7742	1147.53385	3.1313	0.0017998	3.4791	0.0019997	6.6104	0.0037995	574.7767415398171	62.3	0.60992	64.257	64.03	64.64	1.9571					34	19	3	0	0	0	0.84707	1	26188	26188		17.087	4.555	1	2026900	+		42800	15431	20953	21043	49485	49485					-0.03401945931045702
YIDLNQNM	8	Unmodified	_YIDLNQNM_					0	0	0			REV__ENST00000482824.1_1_3:15676934-15683645:+|nuORF	REV__ENST00000482824.1_1_3:15676934-15683645:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	505.7353698611259	2	505.734217	1009.45388	2.0257	0.0010245	-1.785	-0.00090273	0.24073	0.00012174	505.73345003430563	80.417	0.34691	80.417	80.226	80.572	0					23	10	4	0	0	0	0.88504	1	33477	33477		5.7604	0	1	952250	+		42801	10960	20954	21044	49486	49486					-0.05046755596549701
YIDNLLVRV	9	Unmodified	_YIDNLLVRV_					0	0	0		nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENSG00000107560|ENST00000355624|RAB11FIP2;nc|ENSG00000107560|Q7L804-2|RAB11FIP2;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;ENST00000523182.5_1_8:37720415-37730726:-|nuORF	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	552.8257324099541	2	552.824224	1103.63389	1.5592	0.00086197	0.52102	0.00028803	2.0802	0.00115	552.8242789837906	58.618	0.29294	58.618	58.428	58.721	0					13	8	2	0	0	0	0.37774	1	24430	24430		21.537	11.463	1	619880			42802	3455	20955	21045	49487	49487					0.08622291402753035
YIDNLLVRV	9	Unmodified	_YIDNLLVRV_					0	0	0		nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENSG00000107560|ENST00000355624|RAB11FIP2;nc|ENSG00000107560|Q7L804-2|RAB11FIP2;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;ENST00000523182.5_1_8:37720415-37730726:-|nuORF	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	553.2707397341728	2	552.824224	1103.63389	1.7911	0.00099018	-0.64057	-0.00035412	1.1506	0.00063605	552.8245838805028	56.878	0.27682	58.293	58.123	58.4	1.4145					13	8	2	0	0	0	0.070139	1	23840	23840		39.95	15.929	1	2617100			42803	3455	20955	21045	49488	49488					0.08622291402753035
YIDNLLVRV	9	Unmodified	_YIDNLLVRV_					0	0	0		nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENSG00000107560|ENST00000355624|RAB11FIP2;nc|ENSG00000107560|Q7L804-2|RAB11FIP2;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;ENST00000523182.5_1_8:37720415-37730726:-|nuORF	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	553.2706176638603	2	552.824224	1103.63389	1.0309	0.00056991	0.66608	0.00036822	1.697	0.00093813	552.8259225522743	56.288	0.24728	58.257	58.117	58.364	1.9684					12	7	2	0	0	0	0.070139	1	23621	23621		39.95	17.213	1	2552900			42804	3455	20955	21045	49489	49489					0.08622291402753035
YIDNLLVRV	9	Unmodified	_YIDNLLVRV_					0	0	0		nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1;ENSG00000156675|ENST00000330843|RAB11FIP1;ENST00000522774.1_1_8:37720415-37728147:-|nuORF;ENSG00000107560|ENST00000355624|RAB11FIP2;nc|ENSG00000107560|Q7L804-2|RAB11FIP2;nc|ENSG00000156675|Q6WKZ4-1|RAB11FIP1;ENST00000523182.5_1_8:37720415-37730726:-|nuORF	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	nc|ENSG00000156675|Q6WKZ4-3|RAB11FIP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	552.824224	1103.63389	2.3702	0.0013103	0.9549	0.00052789	3.3251	0.0018382	552.8246738771514	58.044	0.28819	58.367	58.204	58.492	0.32298	-0.0164	0.00049946	NaN	39.95	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	616410			42805	3455	20955	21045							0.08622291402753035
YIDQEELNK	9	Unmodified	_YIDQEELNK_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2823974490166	2	576.282586	1150.55062	0.32765	0.00018882	0.081841	4.7164E-05	0.4095	0.00023599	576.2823760627558	16.903	0.16821	17.801	17.708	17.876	0.89794					12	5	3	0	0	0	0.075994	1	7044	7044		57.722	25.416	1	960740			42806	1194;1010	20956	21046	49490	49490					-0.018634898357504426
YIDQEELNK	9	Unmodified	_YIDQEELNK_					0	0	0		ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000205940|Q58FF8|HSP90AB2P;nc|ENSG00000224411|Q14568|HSP90AA2P;ENST00000507090.2_1_4:13338641-13339112:+|nuORF;nc|ENSG00000080824|P07900-2|HSP90AA1;ENSG00000080824|ENST00000216281|HSP90AA1;ENST00000554401.1_1_14:102549349-102551760:-|nuORF	ENSG00000096384|ENST00000371646|HSP90AB1;nc|ENSG00000080824|P07900-2|HSP90AA1	nc|ENSG00000080824|P07900-2|HSP90AA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.2806274294853	2	576.282586	1150.55062	0.28564	0.00016461	-1.3107	-0.00075531	-1.025	-0.00059071	576.2819897484125	16.703	0.26393	18.006	17.878	18.142	1.3023					13	8	2	0	0	0	0.12216	1	6924	6924		41.956	18.807	1	906190			42807	1194;1010	20956	21046	49491	49491					-0.018634898357504426
YIDTRTVFL	9	Unmodified	_YIDTRTVFL_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3103515505791	2	564.308406	1126.60226	0.82343	0.00046467	1.1335	0.00063966	1.957	0.0011043	564.3092711410462	51.669	0.31114	53.641	53.488	53.799	1.9722					19	9	3	0	0	0	0.21266	1	21640	21640		40.239	10.014	1	1685900			42808	959	20957	21047	49492	49492					0.04402298648801661
YIDTRTVFL	9	Unmodified	_YIDTRTVFL_					0	0	0		ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	ENSG00000077274|ENST00000324068|CAPN6	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	564.308406	1126.60226	1.1555	0.00065206	0.91295	0.00051519	2.0685	0.0011673	564.309837911958	52.239	0.28228	53.636	53.492	53.774	1.3966	-0.0026505	-0.00019686	NaN	40.239	15	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1822400			42809	959	20957	21047							0.04402298648801661
YIDTTLNMF	9	Unmodified	_YIDTTLNMF_					0	0	0		tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.2650634646416	2	559.26535	1116.51615	2.7382	0.0015314	-3.2373	-0.0018105	-0.49908	-0.00027912	559.2634020853092	61.867	0.34154	63.825	63.657	63.999	1.9571					25	10	3	0	0	0	0.44535	1	25966	25966		18.135	0	1	3034400			42810	17291	20958	21048	49493	49493					-0.03745029248239007
YIDTTLNMF	9	Unmodified	_YIDTTLNMF_					0	0	0		tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	559.26535	1116.51615	1.8305	0.0010238	-1.1156	-0.00062393	0.71491	0.00039982	559.2644790156494	63.548	0.24352	63.877	63.725	63.968	0.32899	0.018309	0.0017373	NaN	18.135	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	570540			42811	17291	20958	21048							-0.03745029248239007
YIDTTLNMF	9	Unmodified	_YIDTTLNMF_					0	0	0		tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	tr|A0A7D7A4V5|A0A7D7A4V5_9CLOTStarvation-sensingproteinRspAOS=ClostridiumintestinaleOX=36845GN=HZF06_03480PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	559.26535	1116.51615	2.9374	0.0016428	-3.3506	-0.0018739	-0.41327	-0.00023113	559.2635589607305	62.412	0.3721	63.829	63.619	63.991	1.4172	-0.029481	-0.00076262	NaN	18.135	28	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3208900			42812	17291	20958	21048							-0.03745029248239007
YIEEITEEY	9	Unmodified	_YIEEITEEY_					0	0	0		tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.7707397341728	2	594.768977	1187.5234	4.1569	0.0024724	-1.0382	-0.0006175	3.1187	0.0018549	594.7680742050374	94.825	0.2895	95.566	95.391	95.681	0.74124					15	9	2	0	0	0	0.37357	1	39886	39886		21.747	4.6338	1	2393800			42813	16943	20959	21049	49494	49494					-0.06286018166792928
YIEEITEEY	9	Unmodified	_YIEEITEEY_					0	0	0		tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	tr|A0A7D6VU89|A0A7D6VU89_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.7658569216728	2	594.768977	1187.5234	3.3232	0.0019766	-0.32951	-0.00019598	2.9937	0.0017806	594.7679932795297	94.363	0.37682	95.552	95.367	95.743	1.1887					26	11	3	0	0	0	0.49082	2	39665	39665;39716		15.847	1.0089	1	1613900			42814	16943	20959	21049	49495;49496	49495					-0.06286018166792928
YIEFDGILI	9	Unmodified	_YIEFDGILI_					0	0	0			REV__tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	REV__tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.7936889529228	2	541.792058	1081.56956	4.2139	0.002283	-0.88146	-0.00047757	3.3324	0.0018055	541.7914596929016	94.288	0.465	95.029	94.764	95.229	0.74124					30	14	3	0	0	0	0.34572	1	39644	39644		23.148	1.4018	1	2752700	+		42815	15481	20960	21050	49497	49497					0.032040915259585745
YIEFDGILI	9	Unmodified	_YIEFDGILI_					0	0	0			REV__tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	REV__tr|A0A7D6VTB3|A0A7D6VTB3_9CLOTendopeptidaseLaOS=ClostridiumintestinaleOX=36845GN=HZF06_16610PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	541.7935058474541	2	541.792058	1081.56956	3.3077	0.0017921	-1.4682	-0.00079545	1.8395	0.00099662	541.791287320187	93.797	0.43447	95.074	94.859	95.294	1.277					34	13	3	0	0	0	0.22519	1	39466	39466		30.225	1.738	1	1788000	+		42816	15481	20960	21050	49498	49498					0.032040915259585745
YIEVEYDYEYE	11	Unmodified	_YIEVEYDYEYE_					0	0	0		nc|ENSG00000165322|Q8IWW6-3|ARHGAP12;nc|ENSG00000165322|Q8IWW6-2|ARHGAP12;nc|ENSG00000165322|Q8IWW6-4|ARHGAP12;ENSG00000165322|ENST00000344936|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	nc|ENSG00000165322|Q8IWW6-3|ARHGAP12	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	505.5471374392509	3	505.545167	1513.61367	0.17215	8.7028E-05	3.4221	0.00173	3.5942	0.0018171	505.5470916307336	15.221	0.41519	16.118	15.869	16.284	0.89664					30	13	3	0	0	0	1.0365	2	6280	6280;6344		1.2148	0.51716	1	603100			42817	3830	20961	21051	49499;49500	49499					-0.12259013629022775
YIFCINYSF	9	Unmodified	_YIFCINYSF_					0	0	0			REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|199|2|anti-sense	REV__L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|199|2|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2851135134697	3	390.516049	1168.52632	2.7177	0.0010613	-0.31994	-0.00012494	2.3978	0.00093637	390.51596060258464	74.301	0.60593	75.619	75.342	75.948	1.318					33	19	2	0	0	0	0.11908	1	31295	31295		1.0715	0.9982	1	709140	+		42818	14267	20962	21052	49501	49501					-0.05120421522997276
YIFEKQWNGLN	11	Unmodified	_YIFEKQWNGLN_					0	0	0			REV__RAB9B|p.V120*|1|0.08|ENSG00000123570|chrX:103825427-103825427|C/-|frameshift_variant	REV__RAB9B|p.V120*|1|0.08|ENSG00000123570|chrX:103825427-103825427|C/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	470.7660705447197	3	471.238343	1410.6932	0.48788	0.00022991	4.4753	0.0021089	4.9631	0.0023388	471.5757972190256	13.037	0.25819	13.865	13.742	14	0.82788					11	10	2	0	0	0	0.14606	1	5402	5402		1.1098	0.096179	1	223760	+		42819	9623	20963	21053	49502	49502					0.004281426262878085
YIFIRELIGS	10	Unmodified	_YIFIRELIGS_					0	0	0		tr|A0A553SRV2|A0A553SRV2_NIACINa+/H+antiportersubunitEOS=NialliacirculansOX=1397GN=CEQ21_01820PE=3SV=1	tr|A0A553SRV2|A0A553SRV2_NIACINa+/H+antiportersubunitEOS=NialliacirculansOX=1397GN=CEQ21_01820PE=3SV=1	tr|A0A553SRV2|A0A553SRV2_NIACINa+/H+antiportersubunitEOS=NialliacirculansOX=1397GN=CEQ21_01820PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.2326537966728	3	404.23253	1209.67576	1.8697	0.00075581	-0.26011	-0.00010514	1.6096	0.00065067	404.2322807399528	48.399	0.70022	48.729	48.556	49.256	0.33034					49	22	3	0	0	0	0.60754	1	20281	20281		15.538	0.58129	1	4018700			42820	16580	20964	21054	49503	49503					0.07930847091279247
YIFLYYGLP	9	Unmodified	_YIFLYYGLP_					0	0	0		ENST00000341423.9_1_13:31034336-31034576:-|nuORF	ENST00000341423.9_1_13:31034336-31034576:-|nuORF	ENST00000341423.9_1_13:31034336-31034576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8053466677666	2	574.804968	1147.59538	2.4495	0.001408	-1.708	-0.00098174	0.74149	0.00042621	574.80280949426	61.594	0.31866	63.551	63.4	63.719	1.9571					21	9	4	0	0	0	0.64949	1	25825	25825		9.3474	0	1	1581700			42821	5934	20965	21055	49504	49504					0.02748985768221246
YIFTSYLIY	9	Unmodified	_YIFTSYLIY_					0	0	0			REV__ENST00000307546.13_1_1:114228394-114228526:+|nuORF	REV__ENST00000307546.13_1_1:114228394-114228526:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	394.9319946169853	3	394.874231	1181.60086	0.28988	0.00011447	-2.812	-0.0011104	-2.5222	-0.00099593	394.8732371020201	30.046	0.33963	31.329	31.193	31.532	1.2825					18	10	2	0	0	0	0.11743	1	12579	12579		4.5289	3.3355	1	605500	+		42822	12346	20966	21056	49505	49505					0.017326645600633128
YIFWVDWY	8	Unmodified	_YIFWVDWY_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	398.0664245486259	3	397.855171	1190.54368	1.8494	0.00073579	2.1804	0.00086748	4.0298	0.0016033	397.85626991340354	43.812	0.28335	44.136	43.96	44.244	0.32389					18	8	3	0	0	0	2.3239	1	18410	18410		1.8442	0	1	1215300	+		42823	9049	20967	21057	49506	49506					-0.043967579256559475
YIFWVDWY	8	Unmodified	_YIFWVDWY_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	397.855171	1190.54368	1.3505	0.00053731	3.5089	0.001396	4.8594	0.0019333	397.85654613256105	42.43	0.19294	43.77	43.634	43.827	1.3399	-0.11574	0.00070433	NaN	1.8442	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	506340	+		42824	9049	20967	21057							-0.043967579256559475
YIFWVDWY	8	Unmodified	_YIFWVDWY_					0	0	0			REV__ENSG00000101916|ENST00000218032|TLR8	REV__ENSG00000101916|ENST00000218032|TLR8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	397.855171	1190.54368	1.5984	0.00063593	2.5724	0.0010234	4.1708	0.0016594	397.85620231816984	41.858	0.15907	43.75	43.67	43.829	1.8927	-0.13493	-0.00041341	NaN	1.8442	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	653520	+		42825	9049	20967	21057							-0.043967579256559475
YIGEEEKKI	9	Unmodified	_YIGEEEKKI_					0	0	0		nc|ENSG00000166908|Q8TBX8-2|PIP4K2C;nc|ENSG00000166908|Q8TBX8-3|PIP4K2C;ENSG00000166908|ENST00000354947|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	nc|ENSG00000166908|Q8TBX8-2|PIP4K2C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	554.7999755740166	2	554.797872	1107.58119	2.2319	0.0012383	0.60371	0.00033494	2.8356	0.0015732	554.7979091220651	69.505	0.27739	70.87	70.787	71.064	1.3657					19	8	3	0	0	0	0.68551	1	29235	29235		7.9102	1.187	1	1814700			42826	3933	20968	21058	49507	49507					0.031702885492677524
YIGLALPV	8	Unmodified	_YIGLALPV_					0	0	0		ENSG00000164327|ENST00000357387|RICTOR;nc|ENSG00000164327|Q6R327-3|RICTOR;RICTOR|p.L1512Tfs*4|1|0.3|ENSG00000164327|chr5:38945587-38945594|GTAGTCCA/-|frameshift_variant	ENSG00000164327|ENST00000357387|RICTOR	ENSG00000164327|ENST00000357387|RICTOR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	423.2607299685478	2	423.260197	844.50584	4.1219	0.0017447	-1.1152	-0.00047202	3.0067	0.0012726	423.25990040902445	92.488	0.35966	93.424	93.244	93.604	0.93623					16	10	2	0	0	0	0.89176	1	38917	38917		0.79363	0	1	667190			42827	3772	20969	21059	49508	49508					0.07736775879504876
YIHRERQF	8	Unmodified	_YIHRERQF_					0	0	0		ENST00000497493.1_1_21:38596799-38596853:-|nuORF	ENST00000497493.1_1_21:38596799-38596853:-|nuORF	ENST00000497493.1_1_21:38596799-38596853:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8043090701103	2	574.801614	1147.58868	2.8124	0.0016166	2.7463	0.0015786	5.5587	0.0031951	574.802332146011	62.105	0.31832	63.523	63.365	63.683	1.4177					27	9	4	0	0	0	0.86202	1	26062	26062		15.768	1.8622	1	1805800			42828	6962	20970	21060	49509	49509					0.020784856602404034
YIIDLQKTV	9	Unmodified	_YIIDLQKTV_					0	0	0		tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1;tr|A0A7D6ZX65|A0A7D6ZX65_9CLOTSmallribosomalsubunitproteinuS2OS=ClostridiumintestinaleOX=36845GN=rpsBPE=3SV=1	tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1	tr|A0A553SP04|A0A553SP04_NIACISmallribosomalsubunitproteinuS2OS=NialliacirculansOX=1397GN=rpsBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8187744021416	2	546.818607	1091.62266	1.5508	0.00084798	-0.28389	-0.00015524	1.2669	0.00069275	546.8186109106646	76.026	0.34474	76.026	75.82	76.164	0					27	10	3	0	0	0	0.54523	1	31631	31631		13.508	1.8676	1	2696700			42829	16444	20971	21061	49510	49510					0.08051469308611559
YIIEGLSNKM	10	Unmodified	_YIIEGLSNKM_					0	0	0			REV__tr|A0A7D6VUJ1|A0A7D6VUJ1_9CLOTUvrABCsystemproteinCOS=ClostridiumintestinaleOX=36845GN=uvrCPE=3SV=1	REV__tr|A0A7D6VUJ1|A0A7D6VUJ1_9CLOTUvrABCsystemproteinCOS=ClostridiumintestinaleOX=36845GN=uvrCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3093139529228	2	584.307549	1166.60055	3.2066	0.0018737	0.25638	0.0001498	3.463	0.0020235	584.3076148907123	94.446	0.50162	95.635	95.302	95.803	1.1887					44	15	4	0	0	0	0.6819	1	39768	39768		19.257	3.4098	1	18255000	+		42830	15516	20972	21062	49511	49511					0.023909215685307572
YIISPSQFYI	10	Unmodified	_YIISPSQFYI_					0	0	0		nc|ENSG00000162782|Q8NAT2|TDRD5;ENSG00000162782|ENST00000444136|TDRD5	nc|ENSG00000162782|Q8NAT2|TDRD5	nc|ENSG00000162782|Q8NAT2|TDRD5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	615.8240844607353	2	615.823889	1229.63323	2.264	0.0013942	-3.9792	-0.0024505	-1.7152	-0.0010563	615.8208949588238	59.54	0.15696	59.865	59.776	59.933	0.32553					7	4	2	0	0	0	0.87343	1	24968	24968		4.3292	0	1	402600			42831	3648	20973	21063	49512	49512					0.027594519630611103
YIKAEELYI	9	Unmodified	_YIKAEELYI_					0	0	0		ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	ENSG00000183690|ENST00000420999|EFHC2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	571.3136474490166	2	571.310615	1140.60668	4.1319	0.0023606	2.139	0.001222	6.2709	0.0035826	571.311639809918	94.829	0.26543	95.57	95.391	95.656	0.74124					16	8	3	0	0	0	0.11787	1	39912	39912		5.2307	0	1	785780			42832	4659	20974	21064	49513	49513					0.04199763071733287
YIKLQLQSF	9	Unmodified	_YIKLQLQSF_					0	0	0		CON__ENSEMBL:ENSBTAP00000018229	CON__ENSEMBL:ENSBTAP00000018229	CON__ENSEMBL:ENSBTAP00000018229	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3279907107353	2	570.326599	1138.63865	3.8726	0.0022086	-1.223	-0.00069753	2.6495	0.0015111	570.3257754639391	81.89	0.18935	83.56	83.45	83.639	1.67					10	5	3	0	0	0	0.66839	1	34367	34367		8.5933	0	1	437560		+	42833	327	20975	21065	49514	49514					0.07487175545520586
YIKLQLQSF	9	Unmodified	_YIKLQLQSF_					0	0	0		CON__ENSEMBL:ENSBTAP00000018229	CON__ENSEMBL:ENSBTAP00000018229	CON__ENSEMBL:ENSBTAP00000018229	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	570.326599	1138.63865	3.7425	0.0021344	-0.36096	-0.00020587	3.3815	0.0019286	570.326260599411	82.374	0.16063	83.586	83.505	83.666	1.2125	0.012903	0.00044852	NaN	8.5933	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	369410		+	42834	327	20975	21065							0.07487175545520586
YIKRKKRLGKI	11	Unmodified	_YIKRKKRLGKI_					0	0	0			REV__ENST00000603137.1_1_2:28238673-28239105:-|nuORF	REV__ENST00000603137.1_1_2:28238673-28239105:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	701.9723998904228	2	701.972088	1401.92962	NaN	NaN	NaN	NaN	NaN	NaN	NaN	40.423	1	40.736	40.236	41.236	0.31263								0	0	0	0.63775	1	16994	16994		0.35063	0	1		+		42835	14125	20976	21066	49515	49515					0.24473538981237652
YIKVFHKIF	9	Unmodified	_YIKVFHKIF_					0	0	0		ENST00000601416.1_19:21281704-21301132:+|nuORF;nc|ENSG00000160352|Q96N38-2|ZNF714;nc|ENSG00000160352|Q96N38|ZNF714;ENSG00000160352|ENST00000456283|ZNF714	ENST00000601416.1_19:21281704-21301132:+|nuORF	ENST00000601416.1_19:21281704-21301132:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8583862185478	2	597.855327	1193.6961	NaN	NaN	NaN	NaN	NaN	NaN	NaN	78.8	1	78.8	78.3	79.3	0								0	0	0	0.42693	1	32802	32802		2.3027	0	1				42836	3556	20977	21067	49516	49516					0.10700062541741318
YIKVFHKIF	9	Unmodified	_YIKVFHKIF_					0	0	0		ENST00000601416.1_19:21281704-21301132:+|nuORF;nc|ENSG00000160352|Q96N38-2|ZNF714;nc|ENSG00000160352|Q96N38|ZNF714;ENSG00000160352|ENST00000456283|ZNF714	ENST00000601416.1_19:21281704-21301132:+|nuORF	ENST00000601416.1_19:21281704-21301132:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8576537966728	2	597.855327	1193.6961	2.5642	0.001533	2.2485	0.0013442	4.8126	0.0028772	597.8563076382532	76.264	3.3022	77.558	76.572	79.875	1.2938					275	106	5	0	0	0	0.82604	3	31813	31813;31867;32520		2.3027	2.3027	1	10594000			42837	3556	20977	21067	49517;49518;49519	49517					0.10700062541741318
YIKVFHKIF	9	Unmodified	_YIKVFHKIF_					0	0	0		ENST00000601416.1_19:21281704-21301132:+|nuORF;nc|ENSG00000160352|Q96N38-2|ZNF714;nc|ENSG00000160352|Q96N38|ZNF714;ENSG00000160352|ENST00000456283|ZNF714	ENST00000601416.1_19:21281704-21301132:+|nuORF	ENST00000601416.1_19:21281704-21301132:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8582641482353	2	597.855327	1193.6961	2.7426	0.0016397	1.429	0.00085433	4.1716	0.002494	597.8559896027009	75.901	2.1169	77.668	76.684	78.801	1.7672					192	67	4	0	0	0	0.82604	2	31571	31571;31650		2.3027	0	1	9838100			42838	3556	20977	21067	49520;49521	49520					0.10700062541741318
YIKYYLIL	8	Unmodified	_YIKYYLIL_					0	0	0			REV__ENSG00000179097|ENST00000319595|HTR1F	REV__ENSG00000179097|ENST00000319595|HTR1F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	544.8257934451103	2	544.823161	1087.63177	1.9045	0.0010376	2.6212	0.0014281	4.5257	0.0024657	544.8248446603118	82.57	0.3381	82.57	82.368	82.706	0					21	10	3	0	0	0	0.88409	1	34433	34433		6.3541	1.1234	1	1934000	+		42839	11269	20978	21068	49522	49522					0.09145862664945525
YILEIALML	9	Unmodified	_YILEIALML_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8155395388603	2	539.814479	1077.6144	1.7886	0.00096553	-1.6453	-0.00088815	0.14335	7.7381E-05	539.8131098901911	46.341	0.43317	47.716	47.555	47.988	1.3751					20	13	2	0	0	0	0.15478	1	19385	19385		38.151	3.9638	1	1543500	+		42840	11085	20979	21069	49523	49523					0.07870199067610884
YILEIALML	9	Unmodified	_YILEIALML_					0	0	0			REV__ENSG00000173175|ENST00000462833|ADCY5	REV__ENSG00000173175|ENST00000462833|ADCY5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8158447146416	2	539.814479	1077.6144	1.3807	0.00074531	-1.6362	-0.00088326	-0.25556	-0.00013796	539.8142064011855	45.902	0.30806	47.873	47.695	48.003	1.9703					22	9	3	0	0	0	0.20838	1	19235	19235		32.117	0	1	1396700	+		42841	11085	20979	21069	49524	49524					0.07870199067610884
YILIPVLLW	9	Unmodified	_YILIPVLLW_					0	0	0			REV__tr|A0A553SSV8|A0A553SSV8_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_03930PE=3SV=1	REV__tr|A0A553SSV8|A0A553SSV8_NIACIProbablemembranetransporterproteinOS=NialliacirculansOX=1397GN=CEQ21_03930PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3555786013603	2	565.354628	1128.6947	2.0389	0.0011527	-2.7181	-0.0015367	-0.67922	-0.000384	565.353083799911	84.436	0.59512	84.436	84.058	84.653	0					40	18	3	0	0	0	0.24585	1	35121	35121		28.173	7.302	1	3490900	+		42842	15218	20980	21070	49525	49525					0.13550428453004315
YILKDNSQK	9	Unmodified	_YILKDNSQK_					0	0	0		nc|ENSG00000132972|Q9BXT8-4|RNF17;nc|ENSG00000132972|Q9BXT8-5|RNF17;ENSG00000132972|ENST00000255324|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	nc|ENSG00000132972|Q9BXT8-4|RNF17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8021118044853	2	554.803488	1107.59242	2.2501	0.0012483	-0.4489	-0.00024905	1.8012	0.00099929	554.8038546368001	40.901	0.50324	42.226	42.084	42.587	1.3254					34	15	3	0	0	0	0.61249	1	17255	17255		10.824	2.0785	1	1936100			42843	2552	20981	21071	49526	49526					0.0429311064342528
YILLMLFHK	9	Unmodified	_YILLMLFHK_					0	0	0		tr|A0A553SU60|A0A553SU60_NIACIRodshape-determiningproteinMreDOS=NialliacirculansOX=1397GN=CEQ21_06420PE=4SV=1	tr|A0A553SU60|A0A553SU60_NIACIRodshape-determiningproteinMreDOS=NialliacirculansOX=1397GN=CEQ21_06420PE=4SV=1	tr|A0A553SU60|A0A553SU60_NIACIRodshape-determiningproteinMreDOS=NialliacirculansOX=1397GN=CEQ21_06420PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3445312380791	2	589.343738	1176.67292	2.6941	0.0015878	-1.164	-0.00068599	1.5301	0.00090176	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.75267	1	31688	31688		5.2307	0	1	8587800			42844	16680	20982	21072	49527	49527					0.0916530043275543
YILLTYQLVTV	11	Unmodified	_YILLTYQLVTV_					0	0	0			REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	663.3927490115166	2	663.389396	1324.76424	3.9195	0.0026001	0.65564	0.00043494	4.5751	0.0030351	663.390265482007	94.845	0.25612	95.586	95.487	95.743	0.74124					14	8	2	0	0	0	0.29848	1	39915	39915		32.305	17.467	1	1351200	+		42845	12861	20983	21073	49528	49528					0.11484842611048407
YILLTYQLVTV	11	Unmodified	_YILLTYQLVTV_					0	0	0			REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	663.3928100466728	2	663.389396	1324.76424	3.0963	0.0020541	0.1181	7.8344E-05	3.2144	0.0021324	663.3902999846664	94.478	0.30674	95.666	95.527	95.834	1.1887					15	9	3	0	0	0	0.45252	1	39745	39745		25.399	10.561	1	1814000	+		42846	12861	20983	21073	49529	49529					0.11484842611048407
YILLTYQLVTV	11	Unmodified	_YILLTYQLVTV_					0	0	0			REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	663.389396	1324.76424	1.8887	0.001253	0.84782	0.00056243	2.7366	0.0018154	663.3899952632476	95.818	0.11775	95.818	95.746	95.864	0	0.12793	0.00030461	NaN	32.305	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1509800	+		42847	12861	20983	21073							0.11484842611048407
YILLTYQLVTV	11	Unmodified	_YILLTYQLVTV_					0	0	0			REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	663.389396	1324.76424	3.9195	0.0026001	0.65564	0.00043494	4.5751	0.0030351	663.390265482007	94.845	0.25612	95.586	95.487	95.743	0.74124	-0.10403	4.963E-05	NaN	32.305	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1351200	+		42848	12861	20983	21073							0.11484842611048407
YILLTYQLVTV	11	Unmodified	_YILLTYQLVTV_					0	0	0			REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	REV__ENST00000397042.7_1_20:37204638-37204872:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	663.389396	1324.76424	3.0963	0.0020541	0.1181	7.8344E-05	3.2144	0.0021324	663.3902999846664	94.478	0.30674	95.666	95.527	95.834	1.1887	-0.023904	-0.00066357	NaN	32.305	15	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1814000	+		42849	12861	20983	21073							0.11484842611048407
YILPNLLPTIV	11	Unmodified	_YILPNLLPTIV_					0	0	0			REV__ENSG00000198678|ENST00000328207|OR5BS1P	REV__ENSG00000198678|ENST00000328207|OR5BS1P	MSMS	GG20161007_CRH_Patient100_W632_01	3	628.3857910037041	2	628.386657	1254.75876	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.079	1	78.359	77.859	78.859	1.2809								0	0	0	0.63775	1	32355	32355		6.7232	0	1		+		42850	11724	20984	21074	49530	49530					0.14157163819254492
YILQHVHS	8	Unmodified	_YILQHVHS_					0	0	0		ENST00000588570.5_1_19:36103696-36104695:+|nuORF;ENST00000428854.5_1_19:36103723-36104803:+|nuORF;nc|ENSG00000249115|O94927-2|HAUS5;HAUS5|p.G241Rfs*98|1|0.04|ENSG00000249115|chr19:35618087-35618088|-/C|frameshift_variant;ENST00000585968.5_1_19:36103696-36110661:+|nuORF;ENSG00000249115|ENST00000203166|HAUS5	ENST00000588570.5_1_19:36103696-36104695:+|nuORF	ENST00000588570.5_1_19:36103696-36104695:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	498.7688476443291	2	498.766709	995.518865	2.2914	0.0011429	-0.051781	-2.5827E-05	2.2396	0.001117	498.7668786370211	85.016	0.44818	85.016	84.781	85.229	0					24	13	2	0	0	0	0.89176	1	35408	35408		0.79363	0	1	1056100			42851	5372	20985	21075	49531	49531					0.020926069916072265
YILRELPKV	9	Unmodified	_YILRELPKV_					0	0	0		nc|ENSG00000196642|Q3YEC7-4|RABL6;nc|ENSG00000196642|Q3YEC7-5|RABL6;nc|ENSG00000196642|Q3YEC7-6|RABL6;nc|ENSG00000196642|Q3YEC7-3|RABL6;ENSG00000196642|ENST00000311502|RABL6;nc|ENSG00000196642|Q3YEC7-2|RABL6	nc|ENSG00000196642|Q3YEC7-4|RABL6	nc|ENSG00000196642|Q3YEC7-4|RABL6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	377.5694152712822	3	377.569253	1129.68593	0.58514	0.00022093	-0.95821	-0.00036179	-0.37307	-0.00014086	377.5688635258588	37.981	0.60121	39.801	39.403	40.004	1.8202					55	19	4	0	0	0	0.64457	1	15826	15826		9.544	0.56773	1	14190000			42852	4953	20986	21076	49532	49532					0.12627454816470163
YIMPIMIL	8	Unmodified	_YIMPIMIL_					0	0	0		tr|A0A553SHL7|A0A553SHL7_NIACIMembraneproteininsertaseYidCOS=NialliacirculansOX=1397GN=yidCPE=3SV=1	tr|A0A553SHL7|A0A553SHL7_NIACIMembraneproteininsertaseYidCOS=NialliacirculansOX=1397GN=yidCPE=3SV=1	tr|A0A553SHL7|A0A553SHL7_NIACIMembraneproteininsertaseYidCOS=NialliacirculansOX=1397GN=yidCPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.3061706423759	2	497.279218	992.543882	2.0318	0.0010104	2.9478	0.0014659	4.9796	0.0024762	497.28057972269374	40.485	0.31425	42.348	42.171	42.485	1.8624					21	9	3	0	0	0	0.87655	1	16913	16913		11.114	0	1	2604600			42853	16159	20987	21077	49533	49533					0.04731202478319574
YINKCSFQI	9	Unmodified	_YINKCSFQI_					0	0	0			REV__ENSG00000004468|ENST00000226279|CD38	REV__ENSG00000004468|ENST00000226279|CD38	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	557.7266113162041	2	558.281334	1114.54812	2.5998	0.0014514	1.0326	0.00057649	3.6324	0.0020279	558.2829706357771	78.167	0.32949	79.448	79.319	79.649	1.2809					26	10	3	0	0	0	0.10591	1	32768	32768		12.532	3.9383	1	2287000	+		42854	8485	20988	21078	49534	49534					-0.004576167744062332
YINKLKDNL	9	Unmodified	_YINKLKDNL_					0	0	0			REV__tr|A0A7D6VV88|A0A7D6VV88_9CLOTDUF4825domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23445PE=4SV=1	REV__tr|A0A7D6VV88|A0A7D6VV88_9CLOTDUF4825domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23445PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8207885622978	2	560.821681	1119.62881	1.4915	0.00083648	-1.4604	-0.00081902	0.031124	1.7455E-05	560.8212221802087	53.931	0.8165	55.332	55.111	55.927	1.4005					55	26	3	0	0	0	0.57699	1	22708	22708		18.135	0	1	11614000	+		42855	15526	20989	21079	49535	49535					0.07377987540144204
YINNAMLIV	9	Unmodified	_YINNAMLIV_					0	0	0			REV__tr|A0A553SMT4|A0A553SMT4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23125PE=4SV=1	REV__tr|A0A553SMT4|A0A553SMT4_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_23125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	525.7872192263603	2	525.786253	1049.55795	1.459	0.00076711	1.8737	0.00098516	3.3327	0.0017523	525.7878344583257	45.7	0.60231	47.671	47.31	47.912	1.9703					26	18	2	0	0	0	0.5697	1	19196	19196		12.532	0	1	983810	+		42856	15032	20990	21080	49536	49536					0.03515571230968817
YINNLKQQL	9	Unmodified	_YINNLKQQL_					0	0	0		ENST00000449849.2_1_2:203789500-203789902:+|nuORF	ENST00000449849.2_1_2:203789500-203789902:+|nuORF	ENST00000449849.2_1_2:203789500-203789902:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3215209841728	2	567.319306	1132.62406	2.6073	0.0014792	-2.4027	-0.0013631	0.20462	0.00011609	567.8192913395621	47.536	0.431	49.512	49.282	49.713	1.976					37	13	3	0	0	0	0.24063	1	19864	19864		28.487	5.3384	1	4577900			42857	6601	20991	21081	49537	49537					0.06305103397380662
YIPMSLYFL	9	Unmodified	_YIPMSLYFL_					0	0	0		tr|A0A553SRX5|A0A553SRX5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02025PE=4SV=1	tr|A0A553SRX5|A0A553SRX5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02025PE=4SV=1	tr|A0A553SRX5|A0A553SRX5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_02025PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7990600466728	2	573.798829	1145.5831	1.6534	0.00094873	-1.9476	-0.0011175	-0.29413	-0.00016877	573.797784181548	84.319	0.31231	85.478	85.31	85.622	1.159					14	9	2	0	0	0	0.64949	1	35433	35433		9.3474	1.4373	1	3916500			42858	16583	20992	21082	49538	49538					0.016136260335315455
YIQMKIYI	8	Unmodified	_YIQMKIYI_					0	0	0		tr|A0A7D6VRS7|A0A7D6VRS7_9CLOTDUF3021domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03300PE=4SV=1	tr|A0A7D6VRS7|A0A7D6VRS7_9CLOTDUF3021domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03300PE=4SV=1	tr|A0A7D6VRS7|A0A7D6VRS7_9CLOTDUF3021domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_03300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.3020507693291	2	536.298996	1070.58344	5.5864	0.002996	0.36181	0.00019404	5.9482	0.00319	536.2992071885839	88.264	0.41753	89.32	89.08	89.498	1.0562					29	12	3	0	0	0	0.87803	1	37240	37240		10.183	0.83596	1	2650100			42859	16843	20993	21083	49539	49539					0.050970457534049274
YIQTELVKL	9	Unmodified	_YIQTELVKL_					0	0	0		tr|A0A7D7A1Q7|A0A7D7A1Q7_9CLOTElongationfactor4OS=ClostridiumintestinaleOX=36845GN=lepAPE=3SV=1	tr|A0A7D7A1Q7|A0A7D7A1Q7_9CLOTElongationfactor4OS=ClostridiumintestinaleOX=36845GN=lepAPE=3SV=1	tr|A0A7D7A1Q7|A0A7D7A1Q7_9CLOTElongationfactor4OS=ClostridiumintestinaleOX=36845GN=lepAPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.8281127810478	2	553.826432	1105.63831	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.049	1	70.415	69.915	70.915	1.3657								0	0	0	0.32813	1	28970	28970		15.847	2.8047	1				42860	17242	20994	21084	49540	49540					0.08971755825655237
YIRGQHVTI	9	Unmodified	_YIRGQHVTI_					0	0	0			REV__ENSG00000079999|ENST00000171111|KEAP1	REV__ENSG00000079999|ENST00000171111|KEAP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.8101074099541	2	543.806365	1085.59818	1.7453	0.00094912	4.3443	0.0023625	6.0896	0.0033116	543.807572004258	48.475	0.36444	48.805	48.643	49.007	0.33034					16	11	2	0	0	0	0.59203	1	20322	20322		11.64	0.81637	1	504820	+		42861	8803	20995	21085	49541	49541					0.05880253945747427
YIRHLIKC	8	Unmodified	_YIRHLIKC_					0	0	0		tr|A0A553SKE4|A0A553SKE4_NIACIQueuinetRNA-ribosyltransferaseOS=NialliacirculansOX=1397GN=tgtPE=3SV=1	tr|A0A553SKE4|A0A553SKE4_NIACIQueuinetRNA-ribosyltransferaseOS=NialliacirculansOX=1397GN=tgtPE=3SV=1	tr|A0A553SKE4|A0A553SKE4_NIACIQueuinetRNA-ribosyltransferaseOS=NialliacirculansOX=1397GN=tgtPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	523.3049194216728	2	523.302404	1044.59026	2.175	0.0011382	0.17094	8.9452E-05	2.3459	0.0012276	523.8053751895325	69.262	1.9622	70.628	69.541	71.503	1.3657					148	63	5	0	0	0	0.89176	1	28929	28929		0.79363	0	1	5777900			42862	16287	20996	21086	49542	49542					0.06974403424624143
YIRKKFIVV	9	Unmodified	_YIRKKFIVV_					0	0	0		tr|A0A7D7ACC8|A0A7D7ACC8_9CLOTL,D-TPasecatalyticdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18650PE=4SV=1	tr|A0A7D7ACC8|A0A7D7ACC8_9CLOTL,D-TPasecatalyticdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18650PE=4SV=1	tr|A0A7D7ACC8|A0A7D7ACC8_9CLOTL,D-TPasecatalyticdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_18650PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	389.2538329958916	3	389.253376	1164.7383	0.60492	0.00023547	0.65887	0.00025647	1.2638	0.00049194	389.2536565026354	30.03	1.0198	31.845	31.523	32.543	1.8151					98	32	5	0	0	0	0.84531	1	12630	12630		1.1933	0.23107	1	68155000			42863	17319	20997	21087	49543	49543					0.16252037950107479
YIRKKQMAI	9	Unmodified	_YIRKKQMAI_					0	0	0		ENST00000515273.5_2_10:123848201-123892185:+|nuORF	ENST00000515273.5_2_10:123848201-123892185:+|nuORF	ENST00000515273.5_2_10:123848201-123892185:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8431884646416	2	575.841894	1149.66923	3.3483	0.0019281	1.3546	0.00078004	4.7029	0.0027081	575.8424454044815	73.886	2.0161	75.204	74.4	76.416	1.318					179	64	3	0	0	0	0.75267	1	31483	31483		5.2307	0	1	7218900			42864	7053	20998	21088	49544	49544					0.10038630658937109
YIRKKQMAI	9	Unmodified	_YIRKKQMAI_					0	0	0		ENST00000515273.5_2_10:123848201-123892185:+|nuORF	ENST00000515273.5_2_10:123848201-123892185:+|nuORF	ENST00000515273.5_2_10:123848201-123892185:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	575.8452636599541	2	575.841894	1149.66923	2.9432	0.0016948	1.9717	0.0011354	4.9149	0.0028302	575.8428738577131	74.243	0.96037	76.039	75.567	76.527	1.7962					71	30	4	0	0	0	0.75267	1	31296	31296		5.2307	0	1	2216400			42865	7053	20998	21088	49545	49545					0.10038630658937109
YIRSFRKKF	9	Unmodified	_YIRSFRKKF_					0	0	0		tr|A0A7D7A6Q0|A0A7D7A6Q0_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11080PE=4SV=1	tr|A0A7D7A6Q0|A0A7D7A6Q0_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11080PE=4SV=1	tr|A0A7D7A6Q0|A0A7D7A6Q0_9CLOTHelix-turn-helixdomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_11080PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	622.4034911990166	2	622.866757	1243.71896	2.3638	0.0014723	-3.6549	-0.0022765	-1.2911	-0.00080419	622.8658185201331	62.494	0.34358	64.439	64.284	64.628	1.9444					23	10	3	0	0	0	0.11787	1	26178	26178		2.3027	0.4585	1	2446100			42866	17311	20999	21089	49546	49546					0.10685081659198659
YISALVQRV	9	Unmodified	_YISALVQRV_					0	0	0			REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	524.8119384646416	2	524.811116	1047.60768	1.8951	0.00099456	-0.02755	-1.4458E-05	1.8675	0.0009801	524.8107780457589	50.67	0.37273	50.999	50.825	51.197	0.32824					27	11	3	0	0	0	0.12251	1	21231	21231		41.84	7.7372	1	2580500	+		42867	15055	21000	21090	49547	49547					0.08578022231267823
YISALVQRV	9	Unmodified	_YISALVQRV_					0	0	0			REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	524.811116	1047.60768	2.1675	0.0011375	-0.94743	-0.00049722	1.2201	0.0006403	524.8106857446372	51.259	0.40887	51.259	51.039	51.448	0	0.13007	-0.00050747	NaN	41.84	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1581600	+		42868	15055	21000	21090							0.08578022231267823
YISALVQRV	9	Unmodified	_YISALVQRV_					0	0	0			REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	REV__tr|A0A553SNJ0|A0A553SNJ0_NIACIDNAmismatchrepairproteinMutLOS=NialliacirculansOX=1397GN=mutLPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	524.811116	1047.60768	1.8951	0.00099456	-0.02755	-1.4458E-05	1.8675	0.0009801	524.8107780457589	50.67	0.37273	50.999	50.825	51.197	0.32824	-0.13007	0.00045805	NaN	41.84	27	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2580500	+		42869	15055	21000	21090							0.08578022231267823
YISHFSVFF	9	Unmodified	_YISHFSVFF_					0	0	0		L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|347|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|347|2|anti-sense	L1PA3_dup6385|chrX:56129154-56135710:+|1.3158136929043118|0.1454864550760078|3.18|429.0|347|2|anti-sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	573.7866699099541	2	573.784567	1145.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	81.807	1	83.021	82.521	83.521	1.214								0	0	0	0.39421	1	34344	34344		9.3474	0	1				42870	7751	21001	21091	49548	49548					-0.01237355551370456
YISIVIRSSI	10	Unmodified	_YISIVIRSSI_					0	0	0			REV__tr|A0A553STR3|A0A553STR3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_05485PE=4SV=1	REV__tr|A0A553STR3|A0A553STR3_NIACIhistidinekinaseOS=NialliacirculansOX=1397GN=CEQ21_05485PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.8441650271416	2	575.845156	1149.67576	1.8957	0.0010916	-2.5732	-0.0014818	-0.67757	-0.00039018	575.8434594961253	71.537	1.542	72.879	71.924	73.467	1.3415					91	49	3	0	0	0	0.85124	1	29911	29911		6.7232	0.96273	1	2591100	+		42871	15257	21002	21092	49549	49549					0.10690847091291289
YISKQLNPV	9	Unmodified	_YISKQLNPV_					0	0	0		nc|ENSG00000115155|Q9HC10-4|OTOF;nc|ENSG00000115155|Q9HC10-3|OTOF;ENSG00000115155|ENST00000272371|OTOF;nc|ENSG00000115155|Q9HC10-2|OTOF;OTOF|p.G1754Efs*4|1|0.04|ENSG00000115155|chr2:26462109-26462113|CTCCC/-|frameshift_variant;nc|ENSG00000115155|Q9HC10-5|OTOF	nc|ENSG00000115155|Q9HC10-4|OTOF	nc|ENSG00000115155|Q9HC10-4|OTOF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	531.3539916872978	2	531.303124	1060.5917	2.6947	0.0014317	-0.89758	-0.00047689	1.7971	0.00095483	531.3021046710595	71.083	0.51727	72.424	72.054	72.571	1.3415					24	11	3	0	0	0	0.10306	1	29697	29697		13.508	7.3021	1	3630900			42872	1897	21003	21093	49550	49550					0.06382315994369492
YISYIPQIH	9	Unmodified	_YISYIPQIH_					0	0	0		nc|ENSG00000168488|Q8WWM7-6|ATXN2L;ENST00000563314.5_1_16:28834580-28846939:+|nuORF;ATXN2L|p.P765Sfs*253|1|0.19|ENSG00000168488|chr16:28834550-28834587|GCCCCGCCGATGATGCAGGCCGCCGCGGCTGCTGGCCC/-|frameshift_variant;nc|ENSG00000168488|Q8WWM7-8|ATXN2L;nc|ENSG00000168488|Q8WWM7-5|ATXN2L;nc|ENSG00000168488|Q8WWM7-4|ATXN2L;nc|ENSG00000168488|Q8WWM7-9|ATXN2L;nc|ENSG00000168488|Q8WWM7-2|ATXN2L;ENSG00000168488|ENST00000336783|ATXN2L;nc|ENSG00000168488|Q8WWM7-3|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	nc|ENSG00000168488|Q8WWM7-6|ATXN2L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3022338747978	2	567.303124	1132.5917	0.64239	0.00036443	-0.31147	-0.0001767	0.33092	0.00018773	567.3027616868902	58.022	0.54148	59.44	59.273	59.815	1.4181					51	23	3	0	0	0	0.54523	1	24464	24464		13.508	0	1	26063000			42873	95	21004	21094	49551	49551					0.030703159943641367
YITERIIAV	9	Unmodified	_YITERIIAV_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;TNS3-PKD1L1|1|fusion	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3208495974541	2	539.318774	1076.623	1.833	0.00098856	0.83563	0.00045067	2.6686	0.0014392	539.3192020839917	47.342	0.31835	47.342	47.149	47.468	0					21	9	3	0	0	0	0.15066	2	19745	19745;19790		38.615	18.2	1	1623400			42874	2711	21005	21095	49552;49553	49552					0.08774889028472899
YITERIIAV	9	Unmodified	_YITERIIAV_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;TNS3-PKD1L1|1|fusion	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3206054568291	2	539.318774	1076.623	1.7866	0.00096354	1.4282	0.00077028	3.2148	0.0017338	539.3196720523727	46.845	0.30477	47.175	47.023	47.328	0.33034					21	9	3	0	0	0	0.21592	2	19661	19615;19661		31.268	13.133	1	1787400			42875	2711	21005	21095	49554;49555	49555					0.08774889028472899
YITERIIAV	9	Unmodified	_YITERIIAV_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;TNS3-PKD1L1|1|fusion	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3201171755791	2	539.318774	1076.623	2.5114	0.0013544	-0.56476	-0.00030459	1.9466	0.0010498	539.3186562384528	45.226	0.32409	46.592	46.401	46.725	1.3653					27	9	4	0	0	0	0.023685	2	18950	18950;18992		96.367	25.233	1	4776200			42876	2711	21005	21095	49556;49557	49556					0.08774889028472899
YITERIIAV	9	Unmodified	_YITERIIAV_					0	0	0		ENSG00000136205|ENST00000311160|TNS3;nc|ENSG00000136205|Q68CZ2-3|TNS3;nc|ENSG00000136205|Q68CZ2-2|TNS3;nc|ENSG00000136205|Q68CZ2-4|TNS3;TNS3-PKD1L1|1|fusion	ENSG00000136205|ENST00000311160|TNS3	ENSG00000136205|ENST00000311160|TNS3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3204223513603	2	539.318774	1076.623	2.1138	0.00114	0.025343	1.3668E-05	2.1391	0.0011537	539.3189612719862	44.664	0.35088	46.623	46.448	46.799	1.9596					27	10	3	0	0	0	0.093705	2	18710	18710;18749		51.415	17.014	1	4564500			42877	2711	21005	21095	49558;49559	49558					0.08774889028472899
YITKKKGLK	9	Unmodified	_YITKKKGLK_					0	0	0			REV__tr|A0A553SI77|A0A553SI77_NIACIPeptidaseS8OS=NialliacirculansOX=1397GN=CEQ21_14350PE=3SV=1	REV__tr|A0A553SI77|A0A553SI77_NIACIPeptidaseS8OS=NialliacirculansOX=1397GN=CEQ21_14350PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	360.2396118044853	3	360.237615	1077.69102	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.598	1	95.721	95.221	96.221	0.12331								0	0	0	0.42693	1	40006	40006		2.086	0.17963	1		+		42878	14840	21006	21096	49560	49560					0.15527758679127146
YITKRSVSLRV	11	Unmodified	_YITKRSVSLRV_					0	0	0			REV__tr|A0A553SIL9|A0A553SIL9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15100PE=4SV=1	REV__tr|A0A553SIL9|A0A553SIL9_NIACIPRDdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_15100PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	661.4024536013603	2	661.401161	1320.78777	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.538	1	74.856	74.356	75.356	1.318								0	0	0	0.63775	1	30860	30860		2.9952	1.151	1		+		42879	14856	21007	21097	49561	49561					0.1402070116826053
YITLATWIF	9	Unmodified	_YITLATWIF_					0	0	0			REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	REV__tr|A0A553SQF2|A0A553SQF2_NIACIEamAfamilytransporterRarDOS=NialliacirculansOX=1397GN=rarDPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3123046755791	2	564.310418	1126.60628	1.1555	0.00065206	-2.6514	-0.0014962	-1.4958	-0.00084412	564.309837911958	52.239	0.28228	53.636	53.492	53.774	1.3966					15	8	2	0	0	0	0.22519	1	21864	21864		30.225	0	1	1822400	+		42880	15130	21008	21098	49562	49562					0.04804388142520111
YITLMRRI	8	Unmodified	_YITLMRRI_					0	0	0		ENSG00000134697|ENST00000373062|GNL2	ENSG00000134697|ENST00000373062|GNL2	ENSG00000134697|ENST00000373062|GNL2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.7817260622978	2	533.315512	1064.61647	1.6844	0.0008983	-0.93434	-0.0004983	0.75003	0.0004	533.3157054985707	71.705	0.34267	73.047	72.873	73.216	1.3415					22	10	3	0	0	0	2.3239	1	30116	30116		26.341	0	1	3513400			42881	2630	21009	21099	49563	49563					0.08674672596112032
YITPRRQR	8	Unmodified	_YITPRRQR_					0	0	0			REV__ENST00000450656.5_1_4:57844887-57844959:+|nuORF	REV__ENST00000450656.5_1_4:57844887-57844959:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3174926638603	2	545.317432	1088.62031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.832	1	73.656	73.156	74.156	1.824								0	0	0	1.0178	1	30134	30134		2.5775	0.27475	1		+		42882	13131	21010	21100	49564	49564					0.07954478414171717
YITQNRKVR	9	Unmodified	_YITQNRKVR_					0	0	0			REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	REV__ENST00000525284.5_1_15:101565016-101602660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3438598513603	2	589.343646	1176.67274	2.8028	0.0016518	-1.5598	-0.00091927	1.2429	0.00073252	589.3424328799648	73.443	1.6816	75.239	74.56	76.242	1.7962					102	53	3	0	0	0	0.76456	1	30761	30761		4.756	0	1	2043500	+		42883	10465	21011	21101	49565	49565					0.09147016757128767
YIVDHTIIM	9	Unmodified	_YIVDHTIIM_					0	0	0		ENSG00000133028|ENST00000255390|SCO1	ENSG00000133028|ENST00000255390|SCO1	ENSG00000133028|ENST00000255390|SCO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7905151247978	2	552.791535	1103.56852	1.784	0.00098619	-2.118	-0.0011708	-0.33401	-0.00018464	552.790276089005	47.992	0.24929	49.38	49.272	49.521	1.388					12	7	2	0	0	0	0.22519	1	20097	20097		30.225	3.3412	1	1008800			42884	2555	21012	21102	49566	49566					0.020875538853943
YIVEYGGAML	10	Unmodified	_YIVEYGGAML_					0	0	0			REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	REV__nc|ENSG00000259706|Q58FF3|HSP90B2P	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	558.2775756716728	2	558.275718	1114.53688	1.7987	0.0010042	2.0898	0.0011667	3.8885	0.0021708	558.2769094759227	48.86	0.24841	50.837	50.73	50.978	1.9772					10	7	2	0	0	0	0.81324	1	20479	20479		10.824	0.75	1	905810	+		42885	14556	21013	21103	49567	49567					-0.01580438868541023
YIVFDFLPI	9	Unmodified	_YIVFDFLPI_					0	0	0			REV__nc|ENSG00000163406|Q16348-2|SLC15A2	REV__nc|ENSG00000163406|Q16348-2|SLC15A2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.3604003787041	2	563.812793	1125.61103	2.0041	0.00113	3.306	0.001864	5.3101	0.0029939	564.3182202836316	46.791	0.38156	48.174	47.932	48.314	1.3825					16	11	2	0	0	0	0.116	1	19641	19641		5.2307	0	1	424930	+		42886	10685	21014	21104	49568	49568					0.05325272285290339
YIVINNQEII	10	Unmodified	_YIVINNQEII_					0	0	0		tr|A0A553SRU3|A0A553SRU3_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01840PE=4SV=1	tr|A0A553SRU3|A0A553SRU3_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01840PE=4SV=1	tr|A0A553SRU3|A0A553SRU3_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_01840PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	609.8421508669853	2	609.840071	1217.66559	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.079	1	75.875	75.375	76.375	1.7962								0	0	0	0.47271	1	31076	31076		26.268	0.86883	1				42887	16578	21015	21105	49569	49569					0.06546239366048212
YIVNDLYRMI	10	Unmodified	_YIVNDLYRMI_					0	0	0		ENST00000370132.8_1_1:100661637-100661754:-|nuORF	ENST00000370132.8_1_1:100661637-100661754:-|nuORF	ENST00000370132.8_1_1:100661637-100661754:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	650.7965576052666	2	650.341923	1298.66929	2.1419	0.001393	3.8765	0.0025211	6.0185	0.0039141	650.3443555404689	75.736	0.37168	77.039	76.827	77.199	1.3033					18	11	2	0	0	0	0.12525	1	31705	31705		6.7232	3.4419	1	575610			42888	6108	21016	21106	49570	49570					0.03190585868242124
YIVSEIDS	8	Unmodified	_YIVSEIDS_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-2|BBX	REV__nc|ENSG00000114439|Q8WY36-2|BBX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	463.2296020388603	2	463.22929	924.444028	2.0345	0.00094246	0.42804	0.00019828	2.4626	0.0011407	463.22925099763495	73.524	0.36205	73.524	73.28	73.642	0					20	11	2	0	0	0	0.89008	1	30599	30599		2.5775	0	1	2401600	+		42889	9407	21017	21107	49571	49571					-0.021216203302742542
YIVSEIDS	8	Unmodified	_YIVSEIDS_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-2|BBX	REV__nc|ENSG00000114439|Q8WY36-2|BBX	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	463.22929	924.444028	2.0345	0.00094246	0.42804	0.00019828	2.4626	0.0011407	463.22925099763495	73.524	0.36205	73.524	73.28	73.642	0	-0.023409	0.00033437	NaN	2.5775	20	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2401600	+		42890	9407	21017	21107							-0.021216203302742542
YIVSEIDS	8	Unmodified	_YIVSEIDS_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-2|BBX	REV__nc|ENSG00000114439|Q8WY36-2|BBX	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	463.22929	924.444028	2.8763	0.0013324	-0.33231	-0.00015393	2.544	0.0011785	463.2288698155224	73.246	0.3832	73.571	73.371	73.754	0.32494	0.023409	-0.00037006	NaN	2.5775	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3056400	+		42891	9407	21017	21107							-0.021216203302742542
YIVSVLCVTLR	11	Unmodified	_YIVSVLCVTLR_					0	0	0			REV__ENST00000262304.8_1_16:2139174-2139312:-|nuORF	REV__ENST00000262304.8_1_16:2139174-2139312:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3707153201103	2	633.367941	1264.72133	1.9685	0.0012468	1.653	0.001047	3.6215	0.0022938	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	1.0362	1	34515	34515		1.3295	0	1	7751600	+		42892	12194	21018	21108	49572	49572					0.09955749282016768
YIVVDKFKL	9	Unmodified	_YIVVDKFKL_					0	0	0			REV__nc|ENSG00000291239|Q3ZCX4-3|ZNF568	REV__nc|ENSG00000291239|Q3ZCX4-3|ZNF568	MSMS	GG20161007_CRH_Patient100_W632_02	4	375.5631896853447	3	375.561987	1123.66413	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.443	1	48.414	47.914	48.914	1.9703								0	0	0	0.11937	1	19455	19455		32.037	0	1		+		42893	14574	21019	21109	49573	49573					0.10724650067936636
YIWVETKL	8	Unmodified	_YIWVETKL_					0	0	0		ENST00000486853.1_1_6:132168926-132171130:+|nuORF	ENST00000486853.1_1_6:132168926-132171130:+|nuORF	ENST00000486853.1_1_6:132168926-132171130:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2924072146416	2	526.294768	1050.57498	2.0513	0.0010796	-3.5389	-0.0018625	-1.4876	-0.0007829	526.2920978290728	66.214	0.30289	67.602	67.448	67.751	1.3887					20	9	3	0	0	0	0.86202	1	27777	27777		15.768	0	1	2196800			42894	6870	21020	21110	49574	49574					0.05171815108406008
YIWVLQCL	8	Unmodified	_YIWVLQCL_					0	0	0		L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|236|3|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|236|3|anti-sense	L1MA2_dup7380|chr21:18090778-18094843:+|1.4975105070066153|0.0066367591476119|7.82|422.0|236|3|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1398803591728	2	519.278063	1036.54157	2.5061	0.0013014	-2.6259	-0.0013636	-0.11981	-6.2214E-05	519.2769853648399	47.137	0.34489	49.113	48.966	49.311	1.976					22	10	3	0	0	0	2.3239	1	19784	19784		6.3541	0	1	918260			42895	7691	21021	21111	49575	49575					0.024764900648506227
YIYDLDAKRKK	11	Unmodified	_YIYDLDAKRKK_					0	0	0			REV__ENST00000506258.2_1_5:14610514-14614678:+|nuORF	REV__ENST00000506258.2_1_5:14610514-14614678:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	471.9358703494072	3	471.601393	1411.78235	1.1014	0.00051944	0.74996	0.00035368	1.8514	0.00087312	471.6015413916218	14.944	0.24859	14.944	14.812	15.061	0					19	7	3	0	0	0	0.87205	1	6190	6190		6.2344	0.36622	1	785270	+		42896	13537	21022	21112	49576	49576					0.0929297758575558
YIYDLDAKRKK	11	Unmodified	_YIYDLDAKRKK_					0	0	0			REV__ENST00000506258.2_1_5:14610514-14614678:+|nuORF	REV__ENST00000506258.2_1_5:14610514-14614678:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	471.601393	1411.78235	1.1014	0.00051944	0.74996	0.00035368	1.8514	0.00087312	471.6015413916218	14.944	0.24859	14.944	14.812	15.061	0	0	0	NaN	6.2344	19	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	785270	+		42897	13537	21022	21112							0.0929297758575558
YKAAAAAA	8	Unmodified	_YKAAAAAA_					0	0	0		nc|ENSG00000175879|P13378-2|HOXD8;ENSG00000175879|ENST00000313173|HOXD8	nc|ENSG00000175879|P13378-2|HOXD8	nc|ENSG00000175879|P13378-2|HOXD8	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	369.3733703494072	2	368.703046	735.391539	-1.2063	-0.00044477	-3.1504	-0.0011616	-4.3567	-0.0016063	368.7014501274615	104.78	0.073715	104.78	104.74	104.81	0					5	3	2	0	0	0	2.3239	1	44304	44304		0	0	1	4942500			42898	4387	21023	21113	49577	49577					0.013258861173994774
YKDAFKVV	8	Unmodified	_YKDAFKVV_					0	0	0		tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	tr|A0A7D6VUX4|A0A7D6VUX4_9CLOTABCtransporterpermeaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22180PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	485.2747985720634	2	485.273835	968.533118	1.5379	0.00074632	1.2754	0.00061891	2.8133	0.0013652	485.2741373136734	77.905	0.43312	79.657	79.407	79.84	1.7514					30	13	4	0	0	0	0.87276	1	32646	32646		13.508	0.97634	1	4603900			42899	16956	21024	21114	49578	49578					0.04759259419893169
YKDIIREHKRK	11	Unmodified	_YKDIIREHKRK_					0	0	0			REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9606811404228	3	495.959803	1484.85758	2.1412	0.001062	-0.93703	-0.00046473	1.2042	0.00059723	495.9594363954887	88.671	1.1485	88.671	88.029	89.178	0					55	36	2	0	0	0	1.0395	1	37110	37110		0.08335	0	1	1119600	+		42900	11084	21025	21115	49579	49579					0.1345457983684355
YKDIIREHKRK	11	Unmodified	_YKDIIREHKRK_					0	0	0			REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.9596435427666	3	495.959803	1484.85758	1.913	0.00094878	-0.89133	-0.00044206	1.0217	0.00050672	495.9591137591809	90.637	1.2817	90.637	90	91.281	0					98	40	4	0	0	0	1.0395	3	37826	37826;38007;38063		0.08335	0	1	4164400	+		42901	11084	21025	21115	49580;49581;49582	49580					0.1345457983684355
YKDIIREHKRK	11	Unmodified	_YKDIIREHKRK_					0	0	0			REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	496.2955505251884	3	495.959803	1484.85758	1.8088	0.0008971	0.0071615	3.5518E-06	1.816	0.00090065	495.9592899476345	91.605	0.72797	91.605	91.25	91.978	0					33	22	2	0	0	0	1.0395	1	38190	38190		0.08335	0	1	646370	+		42902	11084	21025	21115	49583	49583					0.1345457983684355
YKDIIREHKRK	11	Unmodified	_YKDIIREHKRK_					0	0	0			REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	REV__NOC3L|p.L294Ffs*8|1|0.05|ENSG00000173145|chr10:94352380-94352381|-/CATATCTACA|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	495.959803	1484.85758	2.1412	0.001062	-0.93703	-0.00046473	1.2042	0.00059723	495.9594363954887	88.671	1.1485	88.671	88.029	89.178	0	-0.020142	0.00061574	NaN	0.08335	55	36	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1119600	+		42903	11084	21025	21115							0.1345457983684355
YKDLAKLIYER	11	Unmodified	_YKDLAKLIYER_					0	0	0			REV__tr|A0A7D6W127|A0A7D6W127_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02170PE=4SV=1	REV__tr|A0A7D6W127|A0A7D6W127_9CLOTSigma54-interactingtranscriptionalregulatorOS=ClostridiumintestinaleOX=36845GN=HZF06_02170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	706.9020263552666	2	706.400827	1410.7871	0.93719	0.00066203	-1.5234	-0.0010761	-0.58616	-0.00041407	706.3998259812381	39.509	0.33981	41.371	41.123	41.463	1.8624					20	10	3	0	0	0	0.93654	1	16592	16592		7.609	0	1	959800	+		42904	15585	21026	21116	49584	49584					0.09813861728571283
YKERKRKREKV	11	Unmodified	_YKERKRKREKV_					0	0	0			REV__ENSG00000128908|ENST00000648947|INO80	REV__ENSG00000128908|ENST00000648947|INO80	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	506.7551147341728	3	507.310836	1518.91068	4.5278	0.002297	-1.6663	-0.00084535	2.8614	0.0014516	507.31003610671627	89.629	1.0677	91.033	90.392	91.46	1.4045					73	33	4	0	0	0	0.14606	1	37742	37742		0.40827	0.40827	1	1450400	+		42905	9741	21027	21117	49585	49585					0.17197957619532644
YKFDEYDMI	9	Unmodified	_YKFDEYDMI_					0	0	0			REV__ENSG00000244509|ENST00000361441|APOBEC3C	REV__ENSG00000244509|ENST00000361441|APOBEC3C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	408.5164977908134	3	408.514485	1222.52163	1.4343	0.00058593	2.5682	0.0010491	4.0025	0.0016351	408.85012488769996	71.204	1.5377	73.028	72.518	74.056	1.824					161	49	5	0	0	0	0.83213	1	29775	29775		1.0715	0	1	5702100	+		42906	11940	21028	21118	49586	49586					-0.08073350456425032
YKFRNNLFFV	10	Unmodified	_YKFRNNLFFV_					0	0	0			REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9120971560478	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0237	1	8.6603	8.1603	9.1603	0.63651								0	0	0	0.66264	1	3322	3322		0	0	1		+		42907	15476	21029	21119	49587	49587					0.05405358076700395
YKFRNNLFFV	10	Unmodified	_YKFRNNLFFV_					0	0	0			REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	449.9111816287041	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.4822	1	10.133	9.6328	10.633	0.65058								0	0	0	0.66264	1	3940	3940		0	0	1		+		42908	15476	21029	21119	49588	49588					0.05405358076700395
YKFRNNLFFV	10	Unmodified	_YKFRNNLFFV_					0	0	0			REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	REV__tr|A0A7D6VT55|A0A7D6VT55_9CLOTDeoxynucleosidekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_00785PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	449.9120361208916	3	449.91179	1346.71354	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.808	1	9.5425	9.0425	10.043	0.73452								0	0	0	0.66264	1	3663	3663		0	0	1		+		42909	15476	21029	21119	49589	49589					0.05405358076700395
YKHAQHHDRV	10	Unmodified	_YKHAQHHDRV_					0	0	0		ENSG00000130940|ENST00000377022|CASZ1	ENSG00000130940|ENST00000377022|CASZ1	ENSG00000130940|ENST00000377022|CASZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8879272341728	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.99	1	111.15	110.65	111.65	0.16445								0	0	0	0.66264	1	48180	48180		0	0	1				42910	2471	21030	21120	49590	49590					0.004517739491575412
YKHAQHHDRV	10	Unmodified	_YKHAQHHDRV_					0	0	0		ENSG00000130940|ENST00000377022|CASZ1	ENSG00000130940|ENST00000377022|CASZ1	ENSG00000130940|ENST00000377022|CASZ1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8878661990166	3	430.886527	1289.63775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.12	1	111.28	110.78	111.78	0.16445								0	0	0	0.66264	1	48231	48231		0	0	1				42911	2471	21030	21120	49591	49591					0.004517739491575412
YKHGEKIP	8	Unmodified	_YKHGEKIP_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	486.2674438357353	2	486.269084	970.523616	2.8561	0.0013888	-1.2287	-0.0005975	1.6273	0.00079132	486.2662267423876	81.789	0.61306	82.069	81.753	82.366	0.2802					41	19	3	0	0	0	0.88261	2	34224	34117;34224		7.2892	0	1	6794100			42912	647	21031	21121	49592;49593	49593					0.03717491134352713
YKHGEKIP	8	Unmodified	_YKHGEKIP_					0	0	0		ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	ENSG00000036448|ENST00000262113|MYOM2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	486.269084	970.523616	2.0584	0.0010009	-4.2484	-0.0020658	-2.19	-0.0010649	486.2669220984915	81.809	0.45667	81.809	81.582	82.039	0	-0.13011	-0.00028686	NaN	7.2892	36	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6542800			42913	647	21031	21121							0.03717491134352713
YKIERVFL	8	Unmodified	_YKIERVFL_					0	0	0		ENST00000589189.5_1_18:33289914-33290001:+|nuORF	ENST00000589189.5_1_18:33289914-33290001:+|nuORF	ENST00000589189.5_1_18:33289914-33290001:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.3187744021416	2	534.316035	1066.61752	3.4718	0.001855	1.0496	0.00056081	4.5214	0.0024159	534.3171213641949	103.43	0.056328	103.61	103.58	103.64	0.18066					4	2	2	0	0	0	0.89181	1	43554	43554		0.6015	0	1	54826000			42914	7472	21032	21122	49594	49594					0.08687210236666942
YKIKHKELIKK	11	Unmodified	_YKIKHKELIKK_					0	0	0			REV__tr|A0A7D6VXS4|A0A7D6VXS4_9CLOTEpoxyqueuosinereductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08165PE=4SV=1	REV__tr|A0A7D6VXS4|A0A7D6VXS4_9CLOTEpoxyqueuosinereductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08165PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	476.1997253298759	3	476.641412	1426.90241	2.491	0.0011873	-2.1361	-0.0010182	0.35493	0.00016917	476.6397569380427	52.232	0.30877	52.558	52.28	52.589	0.32553					13	9	2	0	0	0	0.14606	1	21821	21821		0.094841	0	1	1613600	+		42915	15551	21033	21123	49595	49595					0.2060301065018848
YKIKHKELIKK	11	Unmodified	_YKIKHKELIKK_					0	0	0			REV__tr|A0A7D6VXS4|A0A7D6VXS4_9CLOTEpoxyqueuosinereductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08165PE=4SV=1	REV__tr|A0A7D6VXS4|A0A7D6VXS4_9CLOTEpoxyqueuosinereductaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08165PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	476.641412	1426.90241	1.5279	0.00072828	-0.76692	-0.00036554	0.76103	0.00036274	476.9749951050057	50.337	0.32742	52.314	52.039	52.367	1.9772	-0.12186	0.00096072	NaN	0.094841	15	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3780400	+		42916	15551	21033	21123							0.2060301065018848
YKIKSRVLMT	10	Unmodified	_YKIKSRVLMT_					0	0	0		SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant;ENSG00000146285|ENST00000369020|SCML4	SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant	SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8699218630791	2	619.868108	1237.72166	2.2157	0.0013734	2.4227	0.0015017	4.6383	0.0028752	619.8693637329935	76.181	2.1643	77.475	76.512	78.676	1.2938					155	69	3	0	0	0	0.88579	2	32106	31896;32106		2.9952	1.6657	1	2579300			42917	3146	21034	21124	49596;49597	49597					0.11231169001848684
YKIKSRVLMT	10	Unmodified	_YKIKSRVLMT_					0	0	0		SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant;ENSG00000146285|ENST00000369020|SCML4	SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant	SCML4|p.P61T|1|0.42|ENSG00000146285|chr6:107749789-107749789|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8712646365166	2	619.868108	1237.72166	2.39	0.0014815	2.034	0.0012608	4.424	0.0027423	619.8694342335624	75.861	1.5064	77.628	76.716	78.222	1.7672					104	48	3	0	0	0	0.89803	1	31856	31856		1.4819	0	1	2322400			42918	3146	21034	21124	49598	49598					0.11231169001848684
YKKKDALVPTT	11	Unmodified	_YKKKDALVPTT_					0	0	0			REV__ENSG00000136928|ENST00000259455|GABBR2	REV__ENSG00000136928|ENST00000259455|GABBR2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.3719970583916	2	632.368995	1262.72344	2.7686	0.0017507	2.8816	0.0018223	5.6502	0.003573	632.3712260473109	107.37	0.096573	107.53	107.49	107.58	0.15795					9	4	3	0	0	0	1.0366	1	46124	46124		1.1933	0.735	1	17551000	+		42919	10001	21035	21125	49599	49599					0.10258501291468747
YKKKKKRRYQ	10	Unmodified	_YKKKKKRRYQ_					0	0	0		ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4462158083916	2	713.443695	1424.87284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	118.03	1	118.19	117.69	118.69	0.15606								0	0	0	0.6624	1	50967	50967		0.40072	0.050084	1				42920	3876	21036	21126	49600	49600					0.17739491424731568
YKKKKKRRYQ	10	Unmodified	_YKKKKKRRYQ_					0	0	0		ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	ENSG00000166012|ENST00000448108|TAF1D	MSMS	GG20161007_CRH_Patient100_W632_02	4	713.4537841677666	2	713.443695	1424.87284	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.46	1	119.62	119.12	120.12	0.16584								0	0	0	0.6624	1	51542	51542		0.40072	0.050084	1				42921	3876	21036	21126	49601	49601					0.17739491424731568
YKKKLWNRFA	10	Unmodified	_YKKKLWNRFA_					0	0	0			REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	677.3943969607353	2	677.393139	1352.77173	2.3374	0.0015833	1.0429	0.00070647	3.3803	0.0022898	677.393399060344	82.17	0.63833	82.17	81.854	82.493	0					36	20	2	0	0	0	0.89803	1	34216	34216		1.4819	0.15237	1	1352300	+		42922	14692	21037	21127	49602	49602					0.10945039722014371
YKKKLWNRFA	10	Unmodified	_YKKKLWNRFA_					0	0	0			REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	677.393139	1352.77173	2.3374	0.0015833	1.0429	0.00070647	3.3803	0.0022898	677.393399060344	82.17	0.63833	82.17	81.854	82.493	0	-0.097091	-0.00044952	NaN	1.4819	36	20	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1352300	+		42923	14692	21037	21127							0.10945039722014371
YKKKLWNRFA	10	Unmodified	_YKKKLWNRFA_					0	0	0			REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	677.393139	1352.77173	2.0676	0.0014006	1.3012	0.00088141	3.3688	0.002282	677.3939426456055	81.907	0.67616	82.187	81.968	82.644	0.2802	-0.079567	-9.9653E-05	NaN	1.4819	29	21	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	667630	+		42924	14692	21037	21127							0.10945039722014371
YKKKLWNRFA	10	Unmodified	_YKKKLWNRFA_					0	0	0			REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	REV__tr|A0A553SF68|A0A553SF68_NIACIBeta-galactosidaseOS=NialliacirculansOX=1397GN=CEQ21_08375PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	677.393139	1352.77173	1.8378	0.0012449	5.9108	0.004004	7.7486	0.0052489	677.3982703386966	80.748	0.24596	82.443	82.364	82.61	1.6959	0.17666	0.0061454	NaN	1.4819	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	589280	+		42925	14692	21037	21127							0.10945039722014371
YKKKRRERKKD	11	Unmodified	_YKKKRRERKKD_					0	0	0			REV__ENSG00000124383|ENST00000244230|MPHOSPH10	REV__ENSG00000124383|ENST00000244230|MPHOSPH10	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	307.1161682009697	5	307.791592	1533.92158	0.60952	0.00018761	-0.70872	-0.00021814	-0.099202	-3.0533E-05	307.9919108079435	33.323	0.51199	33.62	33.279	33.791	0.29701					46	16	3	0	0	0	0.14606	1	13888	13888		0	0	1	10233000	+		42926	9645	21038	21128	49603	49603					0.17597359993806094
YKKKYFYKYFR	11	Unmodified	_YKKKYFYKYFR_					0	0	0		NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	817.9504882693291	2	817.448111	1632.88167	1.7239	0.0014092	-0.92997	-0.0007602	0.79397	0.00064903	817.4471304540273	52.518	0.37621	52.844	52.621	52.997	0.32554					35	12	4	0	0	0	1.0405	2	21952	21952;22000		0	0	1	2432800			42927	8038	21039	21129	49604;49605	49604					0.09054420270535957
YKKKYFYKYFR	11	Unmodified	_YKKKYFYKYFR_					0	0	0		NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	NLRP6|p.D353Y|1|0.09|ENSG00000174885|chr11:280791-280791|G/T|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	817.4479858279228	2	817.448111	1632.88167	0.34137	0.00027906	0.21613	0.00017668	0.5575	0.00045573	817.4475008913258	51.333	0.39979	52.727	52.468	52.868	1.3938					36	12	4	0	0	0	1.0405	2	21466	21466;21539		0	0	1	3704100			42928	8038	21039	21129	49606;49607	49606					0.09054420270535957
YKKLAGRR	8	Unmodified	_YKKLAGRR_					0	0	0		AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	331.2097961306572	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.228	1	60.228	59.728	60.728	0								0	0	0	1.0178	1	25118	25118		0.45834	0	1				42929	43	21040	21130	49608	49608					0.11300281390845157
YKKLAGRR	8	Unmodified	_YKKLAGRR_					0	0	0		AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	AluSc8_dup7305|chr6:30493012-30493324:+|1.0739830454542594|0.0449135051643763|4.58|420.0|6|2|sense	MSMS	GG20161007_CRH_Patient100_A02_02	2	331.2121459841728	3	331.210171	990.608683	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.237	1	58.56	58.06	59.06	0.32298								0	0	0	1.0178	1	24410	24410		0.45834	0	1				42930	43	21040	21130	49609	49609					0.11300281390845157
YKKLILLL	8	Unmodified	_YKKLILLL_					0	0	0			REV__tr|A0A7D6VQA3|A0A7D6VQA3_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19600PE=4SV=1	REV__tr|A0A7D6VQA3|A0A7D6VQA3_9CLOTUncharacterizedproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_19600PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	502.3516418337822	2	502.349346	1002.68414	2.9632	0.0014886	1.6629	0.00083538	4.6262	0.002324	502.34987973779954	109.51	0.56315	109.66	109.38	109.95	0.1548					40	22	3	0	0	0	0.89198	1	47481	47481		0	0	1	12096000	+		42931	15380	21041	21131	49610	49610					0.18290445798584187
YKKLRRLI	8	Unmodified	_YKKLRRLI_					0	0	0			REV__ENSG00000124253|ENST00000319441|PCK1	REV__ENSG00000124253|ENST00000319441|PCK1	MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3690063357353	2	545.366393	1088.71823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	107.26	1	107.42	106.92	107.92	0.15781								0	0	0	1.0178	1	46090	46090		0.79363	0	1		+		42932	9642	21042	21132	49611	49611					0.17742287010196378
YKKLVRRGL	9	Unmodified	_YKKLVRRGL_					0	0	0		AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2484313845634	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.47	1	108.47	107.97	108.97	0								0	0	0	0.42693	1	46750	46750		0	0	1				42933	56	21043	21133	49612	49612					0.16345385521844946
YKKLVRRGL	9	Unmodified	_YKKLVRRGL_					0	0	0		AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	AluY_dup96259|chr19:11835084-11835388:+|1.0004158493293698|0.4083043413928744|1.29|429.0|7|2|sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	378.2483093142509	3	378.248625	1131.72405	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.57	1	108.57	108.07	109.07	0								0	0	0	0.42693	1	46802	46802		0	0	1				42934	56	21043	21133	49613	49613					0.16345385521844946
YKLLIHMRVH	10	Unmodified	_YKLLIHMRVH_					0	0	0		ENST00000467497.6_1_9:3855970-4118001:-|nuORF;nc|ENSG00000174332|Q8NBF1|GLIS1;GLIS1|p.P583Sfs*9|1|0.27|ENSG00000174332|chr1:53506735-53506736|-/AACGGGAAGA|frameshift_variant;nc|ENSG00000107249|Q8NEA6|GLIS3;ENSG00000174332|ENST00000628545|GLIS1;GLIS3|p.T657Qfs*50|1|0.04|ENSG00000107249|chr9:3856048-3856048|T/-|frameshift_variant;ENSG00000107249|ENST00000381971|GLIS3	ENST00000467497.6_1_9:3855970-4118001:-|nuORF	ENST00000467497.6_1_9:3855970-4118001:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	437.2563049197197	3	437.256904	1308.74888	2.7867	0.0012185	0.019107	8.3545E-06	2.8058	0.0012269	437.25661761529017	83.584	1.1665	83.855	83.091	84.257	0.27029					77	37	3	0	0	0	0.89588	1	34846	34846		1.9064	0.69154	1	1929400			42935	1595	21044	21134	49614	49614					0.10685697332905875
YKLLLILVI	9	Unmodified	_YKLLLILVI_					0	0	0		tr|A0A7D6VQ84|A0A7D6VQ84_9CLOTAryl-sulfatesulfotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19800PE=4SV=1	tr|A0A7D6VQ84|A0A7D6VQ84_9CLOTAryl-sulfatesulfotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19800PE=4SV=1	tr|A0A7D6VQ84|A0A7D6VQ84_9CLOTAryl-sulfatesulfotransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_19800PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	363.2522765994072	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.4	1	111.55	111.05	112.05	0.15038								0	0	0	0.42693	1	48279	48279		0.23584	0	1				42936	16785	21045	21135	49615	49615					0.20175288004134018
YKLVRKVKK	9	Unmodified	_YKLVRKVKK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1161.784716784954	1	1161.78302	1160.77575	2.768	0.0032158	-2.2087	-0.002566	0.5593	0.00064978	1161.7814258678359	108.07	0.065384	108.23	108.2	108.26	0.15781					17	8	3	0	0	0	0.85403	1	46634	46634		0	0	1	41367000	+		42937	15393	21046	21136	49616	49616					0.20179129215716785
YKLVRKVKK	9	Unmodified	_YKLVRKVKK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1161.783129870892	1	1161.78302	1160.77575	2.8603	0.0033231	-0.70567	-0.00081983	2.1547	0.0025032	1161.7824547440994	108.04	0.1004	108.2	108.15	108.26	0.15795					18	13	2	0	0	0	0.85403	1	46563	46563		0	0	1	54915000	+		42938	15393	21046	21136	49617	49617					0.20179129215716785
YKLVRKVKK	9	Unmodified	_YKLVRKVKK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1161.78302	1160.77575	2.768	0.0032158	-2.2087	-0.002566	0.5593	0.00064978	1161.7814258678359	108.07	0.065384	108.23	108.2	108.26	0.15781	0.012928	-0.00095606	NaN	0	17	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	41367000	+		42939	15393	21046	21136							0.20179129215716785
YKLVRKVKK	9	Unmodified	_YKLVRKVKK_					0	0	0			REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	REV__tr|A0A7D6VQV4|A0A7D6VQV4_9CLOTPolyphosphatekinaseOS=ClostridiumintestinaleOX=36845GN=ppkPE=3SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	1161.78302	1160.77575	2.8603	0.0033231	-0.70567	-0.00081983	2.1547	0.0025032	1161.7824547440994	108.04	0.1004	108.2	108.15	108.26	0.15795	-0.012928	0.0007901	NaN	0	18	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54915000	+		42940	15393	21046	21136							0.20179129215716785
YKPKDLSRRI	10	Unmodified	_YKPKDLSRRI_					0	0	0			REV__tr|A0A7D6ZHF5|A0A7D6ZHF5_9CLOTPolyphosphatepolymerasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02760PE=4SV=1	REV__tr|A0A7D6ZHF5|A0A7D6ZHF5_9CLOTPolyphosphatepolymerasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02760PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	638.3827392458916	2	638.380229	1274.7459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.689	1	95.812	95.312	96.312	0.12331								0	0	0	0.66176	1	40045	40045		1.4819	0	1		+		42941	15650	21047	21137	49618	49618					0.1195214547976775
YKPKRLPV	8	Unmodified	_YKPKRLPV_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	500.8203918337822	2	500.818744	999.622936	2.0994	0.0010514	0.56886	0.0002849	2.6682	0.0013363	500.8187932819541	41.864	0.27156	43.199	43.105	43.376	1.3344					14	8	2	0	0	0	0.74212	1	17604	17604		26.341	5.8877	1	872990	+		42942	14379	21048	21138	49619	49619					0.12310933819117054
YKPKRLPV	8	Unmodified	_YKPKRLPV_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	500.818744	999.622936	2.0994	0.0010514	0.56886	0.0002849	2.6682	0.0013363	500.8187932819541	41.864	0.27156	43.199	43.105	43.376	1.3344	-0.051796	0.00057306	NaN	26.341	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	872990	+		42943	14379	21048	21138							0.12310933819117054
YKPKRLPV	8	Unmodified	_YKPKRLPV_					0	0	0			REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	REV__nc|ENSG00000006611|Q9Y6N9-2|USH1C	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	500.818744	999.622936	1.6628	0.00083278	-0.35327	-0.00017692	1.3096	0.00065586	500.81833040950994	41.41	0.29409	43.302	43.119	43.413	1.8927	0.051796	-0.00035058	NaN	26.341	14	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1266600	+		42944	14379	21048	21138							0.12310933819117054
YKPPRIPSCL	10	Unmodified	_YKPPRIPSCL_					0	0	0			REV__ENSG00000138078|ENST00000409411|PREPL	REV__ENSG00000138078|ENST00000409411|PREPL	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	586.7926513552666	2	587.326076	1172.6376	2.068	0.0012146	-4.1245	-0.0024224	-2.0565	-0.0012079	587.323806938153	40.811	0.15731	42.704	42.61	42.768	1.8927					8	4	3	0	0	0	0.125	1	17124	17124		10.074	2.7847	1	427090	+		42945	10040	21049	21139	49620	49620					0.05818637904985735
YKQLPHKV	8	Unmodified	_YKQLPHKV_					0	0	0			REV__ENSG00000196233|ENST00000421806|LCOR	REV__ENSG00000196233|ENST00000421806|LCOR	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	339.0185119509697	3	338.202793	1011.58655	0.22173	7.4988E-05	-0.17522	-5.926E-05	0.046507	1.5729E-05	338.2026528797411	28.008	0.33677	29.783	29.602	29.939	1.7754					19	10	2	0	0	0	2.3239	1	11754	11754		0.45834	0	1	668900	+		42946	11622	21050	21140	49621	49621					0.08122056922411502
YKRCRKWIL	9	Unmodified	_YKRCRKWIL_					0	0	0		ENST00000523988.5_1_13:45969527-45969839:-|nuORF	ENST00000523988.5_1_13:45969527-45969839:-|nuORF	ENST00000523988.5_1_13:45969527-45969839:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	633.3704101443291	2	633.36861	1264.72267	1.9685	0.0012468	0.59726	0.00037828	2.5657	0.0016251	633.3687852822659	81.393	2.395	81.684	80.809	83.204	0.29055					213	77	4	0	0	0	0.85019	2	34217	34217;34271		0.52476	0	1	7751600			42947	7107	21051	21141	49622;49623	49622					0.1008942816142735
YKRDWYDLIA	10	Unmodified	_YKRDWYDLIA_					0	0	0		nc|ENSG00000183091|P20929-3|NEB;ENSG00000183091|ENST00000397345|NEB;nc|ENSG00000183091|P20929-4|NEB;nc|ENSG00000183091|P20929-1|NEB	nc|ENSG00000183091|P20929-3|NEB	nc|ENSG00000183091|P20929-3|NEB	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	671.8483764529228	2	671.843145	1341.67174	2.2443	0.0015078	4.2229	0.0028372	6.4673	0.004345	671.8449659617868	58.925	0.37765	58.925	58.784	59.161	0					26	11	3	0	0	0	0.80072	1	24557	24557		5.7319	0.83484	1	1439100			42948	4640	21052	21142	49624	49624					0.014567575975888758
YKRIYNNI	8	Unmodified	_YKRIYNNI_					0	0	0		ENST00000558958.1_1_15:65449172-65477491:-|nuORF;ENSG00000166855|ENST00000300107|CLPX	ENST00000558958.1_1_15:65449172-65477491:-|nuORF	ENST00000558958.1_1_15:65449172-65477491:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3019286990166	2	542.300916	1082.58728	1.7738	0.00096194	0.30023	0.00016281	2.074	0.0011248	542.3009626197548	51.995	0.69077	51.995	51.756	52.447	0					45	21	3	0	0	0	0.87276	1	21769	21769		13.508	0	1	2321500			42949	3926	21053	21143	49625	49625					0.04928851571457926
YKRLKLFQFLK	11	Unmodified	_YKRLKLFQFLK_					0	0	0			REV__ENSG00000176907|ENST00000315792|TCIM	REV__ENSG00000176907|ENST00000315792|TCIM	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	742.4633056521416	2	742.461022	1482.90749	2.6594	0.0019745	0.10387	7.7118E-05	2.7632	0.0020516	742.4613498794396	86.318	0.21954	87.445	87.343	87.563	1.1265					15	8	2	0	0	0	1.0395	1	36365	36365		0.30703	0.30703	1	10084000	+		42950	11197	21054	21144	49626	49626					0.18535314512814693
YKRRRKKRSER	11	Unmodified	_YKRRRKKRSER_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	521.6547119021416	3	521.653596	1561.93896	1.7311	0.00090304	-0.84331	-0.00043992	0.88781	0.00046313	521.6535404583063	97.065	0.14851	97.065	96.988	97.136	0					9	4	3	0	0	0	1.0405	1	40583	40583		0	0	1	1469100			42951	7963	21055	21145	49627	49627					0.1804670031947353
YKRRRKKRSER	11	Unmodified	_YKRRRKKRSER_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	521.653596	1561.93896	2.8921	0.0015087	-2.4827	-0.0012951	0.40941	0.00021357	521.6521478906603	97.03	0.15605	97.135	97.038	97.194	0.105	0.022807	-0.0020569	NaN	0	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1335700			42952	7963	21055	21145							0.1804670031947353
YKRRRKKRSER	11	Unmodified	_YKRRRKKRSER_					0	0	0		nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	nc|ENSG00000197381|P78563-5|ADARB1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	521.653596	1561.93896	3.925	0.0020475	3.0165	0.0015736	6.9415	0.0036211	521.6551567948699	96.852	0.11665	97.136	97.077	97.194	0.28442	0.024568	0.0065492	NaN	0	5	3	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	669820			42953	7963	21055	21145							0.1804670031947353
YKRVMMEIRQ	10	Unmodified	_YKRVMMEIRQ_					0	0	0		tr|A0A553SPD4|A0A553SPD4_NIACIYlbFfamilyregulatorOS=NialliacirculansOX=1397GN=CEQ21_26080PE=4SV=1	tr|A0A553SPD4|A0A553SPD4_NIACIYlbFfamilyregulatorOS=NialliacirculansOX=1397GN=CEQ21_26080PE=4SV=1	tr|A0A553SPD4|A0A553SPD4_NIACIYlbFfamilyregulatorOS=NialliacirculansOX=1397GN=CEQ21_26080PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	451.9089843630791	3	451.909175	1352.7057	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5835	1	3.5835	3.0835	4.0835	0								0	0	0	0.66255	1	1472	1472		0.13989	0	1				42954	16461	21056	21146	49628	49628					0.04345139493307215
YKRYSDIIF	9	Unmodified	_YKRYSDIIF_					0	0	0		tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.3254882693291	2	602.821681	1203.62881	1.3902	0.00083806	-0.12355	-7.4481E-05	1.2667	0.00076358	603.3238301961542	48.552	0.1829	49.94	49.804	49.987	1.388					9	5	2	0	0	0	0.51189	1	20322	20322		14.838	1.7958	1	1150100			42955	16338	21057	21147	49629	49629					0.03513987540122798
YKRYSDIIF	9	Unmodified	_YKRYSDIIF_					0	0	0		tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	tr|A0A553SLK8|A0A553SLK8_NIACIMgahelix-turn-helixdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_20805PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	602.8209106326103	2	602.821681	1203.62881	2.3658	0.0014261	-2.93	-0.0017663	-0.56424	-0.00034014	602.8196256247847	47.998	0.18469	49.975	49.899	50.084	1.9772					9	5	2	0	0	0	0.39927	1	20115	20115		20.454	2.3073	1	1395500			42956	16338	21057	21147	49630	49630					0.03513987540122798
YKSKKKKKK	9	Unmodified	_YKSKKKKKK_					0	0	0			REV__ENST00000205636.3_1_3:32524128-32524239:-|nuORF	REV__ENST00000205636.3_1_3:32524128-32524239:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.3936645388603	2	583.392608	1164.77066	3.1727	0.0018509	-2.857	-0.0016667	0.31574	0.0001842	583.3910198683096	107.43	0.26781	107.59	107.45	107.72	0.15795					45	13	5	0	0	0	0.85068	1	46135	46135		0.45834	0.057624	1	600510000	+		42957	12056	21058	21148	49631	49631					0.19486825353124004
YKVLLEKLLL	10	Unmodified	_YKVLLEKLLL_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25227083-25246387:+|nuORF	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MSMS	GG20161007_CRH_Patient100_W632_01	3	411.2734557986259	3	411.272325	1230.79515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.75	1	110.91	110.41	111.41	0.16133								0	0	0	0.66264	1	48085	48085		0	0	1				42958	3181	21059	21149	49632	49632					0.1889804071602157
YKVLLEKLLL	10	Unmodified	_YKVLLEKLLL_					0	0	0		ENSG00000147459|ENST00000276440|DOCK5;ENST00000467709.6_1_8:25227083-25246387:+|nuORF	ENSG00000147459|ENST00000276440|DOCK5	ENSG00000147459|ENST00000276440|DOCK5	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2729675173759	3	411.272325	1230.79515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.78	1	110.93	110.43	111.43	0.15228								0	0	0	0.66264	1	48029	48029		0	0	1				42959	3181	21059	21149	49633	49633					0.1889804071602157
YKVVFVRR	8	Unmodified	_YKVVFVRR_					0	0	0		nc|ENSG00000164077|Q86VX9-3|MON1A;nc|ENSG00000164077|Q86VX9-2|MON1A;ENST00000486107.5_1_3:49947550-49967319:-|nuORF;nc|ENSG00000164077|Q86VX9-4|MON1A;ENSG00000164077|ENST00000296473|MON1A;nc|ENSG00000164077|Q86VX9|MON1A	nc|ENSG00000164077|Q86VX9-3|MON1A	nc|ENSG00000164077|Q86VX9-3|MON1A	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	533.1944457888603	2	533.829643	1065.64473	3.4893	0.0018627	-0.87262	-0.00046583	2.6167	0.0013969	533.8291828870316	100.17	0.12024	100.37	100.3	100.42	0.20527					5	3	2	0	0	0	2.3239	1	42098	42098		0.69038	0	1	1378000			42960	3747	21060	21150	49634	49634					0.11453738567684013
YKWIKKGR	8	Unmodified	_YKWIKKGR_					0	0	0		tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2193176150322	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.243	1	19.222	18.722	19.722	0.97922								0	0	0	1.0178	1	7596	7596		0.40072	0	1				42961	16494	21061	21151	49635	49635					0.109017385676907
YKWIKKGR	8	Unmodified	_YKWIKKGR_					0	0	0		tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2225524783134	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.879	1	19.937	19.437	20.437	1.0585								0	0	0	1.0178	1	7867	7867		0.40072	0	1				42962	16494	21061	21151	49636	49636					0.109017385676907
YKWIKKGR	8	Unmodified	_YKWIKKGR_					0	0	0		tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	tr|A0A553SQ26|A0A553SQ26_NIACIFlagellarproteinOS=NialliacirculansOX=1397GN=CEQ21_15560PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	360.2226745486259	3	360.222188	1077.64473	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.356	1	20.414	19.914	20.914	1.0585								0	0	0	1.0178	1	8063	8063		0.40072	0	1				42963	16494	21061	21151	49637	49637					0.109017385676907
YKWRNREGR	9	Unmodified	_YKWRNREGR_					0	0	0			REV__nc|ENSG00000204406|Q9P267|MBD5	REV__nc|ENSG00000204406|Q9P267|MBD5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	316.2121459841728	4	316.921898	1263.65849	-3.5273	-0.0011179	2.729	0.00086487	-0.79832	-0.00025301	316.9229213595743	11.833	0.33804	11.833	11.665	12.003	0					35	10	5	0	0	0	0.11909	1	4935	4935		0.20686	0	1	48071000	+		42964	11780	21062	21152	49638	49638					0.037203643288194144
YKWRRRRT	8	Unmodified	_YKWRRRRT_					0	0	0		ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3578369021416	2	611.357422	1220.70029	2.4485	0.0014969	-0.92514	-0.00056559	1.5234	0.00093132	611.3569134432191	77.056	0.75908	78.337	78.001	78.76	1.2809					38	23	2	0	0	0	0.89178	1	32328	32328		0.69038	0.16561	1	834520			42965	6471	21063	21153	49639	49639					0.09876964808017874
YKWRRRRT	8	Unmodified	_YKWRRRRT_					0	0	0		ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	ENST00000426898.2_1_12:45610123-45776982:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3572875857353	2	611.357422	1220.70029	2.531	0.0015474	-1.3504	-0.00082556	1.1806	0.00072179	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.89178	1	33299	33299		0.69038	0.16561	1	7141600			42966	6471	21063	21153	49640	49640					0.09876964808017874
YKYLRRLFRFR	11	Unmodified	_YKYLRRLFRFR_					0	0	0		ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	ENSG00000115446|ENST00000357765|UNC50	MSMS	GG20161007_CRH_Patient100_A02_01	1	539.9879638552666	3	539.987805	1616.94158	NaN	NaN	NaN	NaN	NaN	NaN	NaN	95.33	1	95.33	94.83	95.83	0								0	0	0	0.63775	1	39841	39841		0	0	1				42967	1920	21064	21154	49641	49641					0.15779155724408156
YKYLRVRRH	9	Unmodified	_YKYLRVRRH_					0	0	0			REV__ENSG00000124171|ENST00000371610|PARD6B	REV__ENSG00000124171|ENST00000371610|PARD6B	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	430.8891784548759	3	430.922912	1289.74691	3.3135	0.0014278	4.1172	0.0017742	7.4307	0.003202	430.92419585367196	93.265	0.28503	94.542	94.388	94.673	1.277					14	8	2	0	0	0	0.11955	1	39187	39187		0.23584	0	1	1059600	+		42968	9635	21065	21155	49642	49642					0.11362404639316992
YKYLRVRRH	9	Unmodified	_YKYLRVRRH_					0	0	0			REV__ENSG00000124171|ENST00000371610|PARD6B	REV__ENSG00000124171|ENST00000371610|PARD6B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	430.922912	1289.74691	1.1445	0.00049317	6.0894	0.0026241	7.2338	0.0031172	430.925311153721	94.41	0.33524	94.41	94.212	94.547	0	-0.058451	0.0015348	NaN	0.23584	26	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2156500	+		42969	9635	21065	21155							0.11362404639316992
YKYLRVRRH	9	Unmodified	_YKYLRVRRH_					0	0	0			REV__ENSG00000124171|ENST00000371610|PARD6B	REV__ENSG00000124171|ENST00000371610|PARD6B	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	430.922912	1289.74691	3.0584	0.0013179	4.8906	0.0021075	7.949	0.0034254	430.92449306042823	94.292	0.34322	94.437	94.228	94.571	0.14493	-0.031219	-1.5042E-05	NaN	0.23584	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1690000	+		42970	9635	21065	21155							0.11362404639316992
YKYLRVRRH	9	Unmodified	_YKYLRVRRH_					0	0	0			REV__ENSG00000124171|ENST00000371610|PARD6B	REV__ENSG00000124171|ENST00000371610|PARD6B	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	430.922912	1289.74691	4.2772	0.0018431	3.0319	0.0013065	7.3091	0.0031497	430.9236215948645	93.612	0.25558	94.484	94.353	94.609	0.87176	0.015685	-0.0024179	NaN	0.23584	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	793310	+		42971	9635	21065	21155							0.11362404639316992
YLAAAAAG	8	Unmodified	_YLAAAAAG_					0	0	0			REV__ENST00000379661.7_1_16:57769646-57770897:+|nuORF	REV__ENST00000379661.7_1_16:57769646-57770897:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	354.1894409060478	2	354.189771	706.36499	1.616	0.00057237	-2.4162	-0.00085578	-0.80016	-0.00028341	354.1888000554236	62.057	0.47706	63.474	63.238	63.715	1.4177					35	14	3	0	0	0	0.89176	1	25993	25993		0.79363	0	1	3916000	+		42972	12748	21066	21156	49643	49643					6.197226082349516E-05
YLADIFTKL	9	Unmodified	_YLADIFTKL_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	542.3090087771416	2	542.307875	1082.6012	1.5281	0.00082869	0.21751	0.00011796	1.7456	0.00094665	542.3078934888288	72.761	0.4401	72.761	72.524	72.964	0					42	13	4	0	0	0	0.023685	3	30283	30238;30283;30322		96.367	40.19	1	11346000			42973	5320	21067	21157	49644;49645;49646	49645					0.06320084279900584
YLADIFTKL	9	Unmodified	_YLADIFTKL_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	542.3095580935478	2	542.307875	1082.6012	1.8785	0.0010187	0.89145	0.00048344	2.77	0.0015022	542.3082504456272	72.143	0.47768	72.468	72.259	72.737	0.32494					45	14	4	0	0	0	0.03071	4	30226	30144;30187;30226;30274		86.332	30.155	1	13826000			42974	5320	21067	21157	49647;49648;49649;49650	49649					0.06320084279900584
YLADIFTKL	9	Unmodified	_YLADIFTKL_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	542.3095580935478	2	542.307875	1082.6012	2.733	0.0014821	-1.5368	-0.00083343	1.1962	0.0006487	542.306815228472	70.975	0.60465	72.317	72.054	72.658	1.3415					61	19	5	0	0	0	0.0080158	3	29770	29726;29770;29809		110.67	40.781	1	47766000			42975	5320	21067	21157	49651;49652;49653	49652					0.06320084279900584
YLADIFTKL	9	Unmodified	_YLADIFTKL_					0	0	0		ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	ENSG00000236287|ENST00000413761|ZBED5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3090698122978	2	542.307875	1082.6012	1.5538	0.00084264	-1.5469	-0.00083889	0.0069136	3.7493E-06	542.3067936538449	70.471	0.69871	72.308	72.073	72.771	1.8378					61	22	5	0	0	0	0.033102	4	29547	29504;29547;29586;29625		82.529	30.261	1	49693000			42976	5320	21067	21157	49654;49655;49656;49657	49655					0.06320084279900584
YLADLYHFV	9	Unmodified	_YLADLYHFV_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.7924682497978	2	570.78985	1139.56515	1.8168	0.001037	2.177	0.0012426	3.9938	0.0022796	570.7909074774899	67.006	0.31152	68.395	68.215	68.526	1.3888					20	9	3	0	0	0	0.20838	1	28114	28114		32.117	19.585	1	928410			42977	1238	21068	21158	49658	49658					0.0009462710302159394
YLADLYHFV	9	Unmodified	_YLADLYHFV_					0	0	0		ENST00000459646.1_1_22:38039726-38040999:+|nuORF;nc|ENSG00000100092|Q9Y3L3-2|SH3BP1;ENSG00000100092|ENST00000649765|SH3BP1	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	ENST00000459646.1_1_22:38039726-38040999:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	570.78985	1139.56515	1.6134	0.00092089	0.54195	0.00030934	2.1553	0.0012302	570.7889943863154	66.514	0.25115	68.403	68.245	68.497	1.8889	0.00388	-0.00088179	NaN	32.117	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	902180			42978	1238	21068	21158							0.0009462710302159394
YLAEKHLFSTI	11	Unmodified	_YLAEKHLFSTI_					0	0	0		ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENSG00000010671|ENST00000308731|BTK	ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	661.3596679568291	2	661.36117	1320.70779	1.6956	0.0011214	-3.1841	-0.0021058	-1.4885	-0.00098444	661.3590513881634	33.936	0.6686	33.936	33.731	34.4	0					49	21	4	0	0	0	0.84637	1	14251	14251		13.042	0.80181	1	2855400			42979	556	21069	21159	49659	49659					0.06026214774396976
YLAEKHLFSTI	11	Unmodified	_YLAEKHLFSTI_					0	0	0		ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENSG00000010671|ENST00000308731|BTK	ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	661.3610107302666	2	661.36117	1320.70779	1.2355	0.00081711	-2.0009	-0.0013233	-0.76542	-0.00050622	661.3597107328549	33.478	0.83727	33.775	33.459	34.296	0.29701					59	27	4	0	0	0	0.70499	2	14059	14059;14097		18.146	2.8979	1	4738100			42980	556	21069	21159	49660;49661	49660					0.06026214774396976
YLAEKHLFSTI	11	Unmodified	_YLAEKHLFSTI_					0	0	0		ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENSG00000010671|ENST00000308731|BTK	ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	661.3599120974541	2	661.36117	1320.70779	0.42106	0.00027847	-2.2947	-0.0015176	-1.8736	-0.0012392	661.3595049481729	32.435	0.69606	33.714	33.439	34.135	1.2782					44	23	4	0	0	0	0.70499	1	13612	13612		18.146	1.9972	1	3831300			42981	556	21069	21159	49662	49662					0.06026214774396976
YLAEKHLFSTI	11	Unmodified	_YLAEKHLFSTI_					0	0	0		ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENSG00000010671|ENST00000308731|BTK	ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	661.3606445193291	2	661.36117	1320.70779	0.71906	0.00047556	-1.9219	-0.0012711	-1.2029	-0.00079553	661.359847544308	31.896	0.33772	33.72	33.51	33.848	1.8246					39	12	4	0	0	0	0.70499	1	13362	13362		18.146	2.8979	1	4031800			42982	556	21069	21159	49663	49663					0.06026214774396976
YLAEKHLFSTI	11	Unmodified	_YLAEKHLFSTI_					0	0	0		ENSG00000010671|ENST00000308731|BTK;nc|ENSG00000010671|Q06187-2|BTK	ENSG00000010671|ENST00000308731|BTK	ENSG00000010671|ENST00000308731|BTK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	441.2413513064384	3	441.243206	1320.70779	0.96638	0.00042641	-2.5979	-0.0011463	-1.6315	-0.00071988	441.24197892057305	31.877	0.35902	33.702	33.536	33.895	1.8246					23	13	3	0	0	0	0.91768	1	13386	13386		4.4062	0.81348	1	1284600			42983	556	21069	21159	49664	49664					0.06026214774396976
YLAGQHREL	9	Unmodified	_YLAGQHREL_					0	0	0			REV__ENSG00000130988|ENST00000397180|RGN	REV__ENSG00000130988|ENST00000397180|RGN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.7902709841728	2	543.788173	1085.56179	2.1062	0.0011453	2.8356	0.001542	4.9418	0.0026873	543.7889432105887	80.735	0.4307	82.431	82.241	82.671	1.6959					27	13	3	0	0	0	0.10993	1	33846	33846		46.021	0	1	2135600	+		42984	9809	21070	21160	49665	49665					0.02243377049035189
YLALTHTET	9	Unmodified	_YLALTHTET_					0	0	0			REV__ENSG00000148386|ENST00000619315|LCN9	REV__ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1812621951103	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.979	1	46.308	45.808	46.808	0.32899								0	0	0	0.42693	1	19298	19298		1.1933	0.12188	1		+		42985	10344	21071	21161	49666	49666					0.001814463437312952
YLALTHTET	9	Unmodified	_YLALTHTET_					0	0	0			REV__ENSG00000148386|ENST00000619315|LCN9	REV__ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1820556521416	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.32	1	46.649	46.149	47.149	0.32899								0	0	0	0.42693	1	19437	19437		1.1933	0.12188	1		+		42986	10344	21071	21161	49667	49667					0.001814463437312952
YLALTHTET	9	Unmodified	_YLALTHTET_					0	0	0			REV__ENSG00000148386|ENST00000619315|LCN9	REV__ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.1816894412041	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	89.012	1	89.235	88.735	89.735	0.22359								0	0	0	0.42693	1	37314	37314		1.1933	0	1		+		42987	10344	21071	21161	49668	49668					0.001814463437312952
YLALTHTET	9	Unmodified	_YLALTHTET_					0	0	0			REV__ENSG00000148386|ENST00000619315|LCN9	REV__ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.1821777224541	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.129	1	89.185	88.685	89.685	1.0562								0	0	0	0.42693	1	37162	37162		5.2969	2.5617	1		+		42988	10344	21071	21161	49669	49669					0.001814463437312952
YLALTHTET	9	Unmodified	_YLALTHTET_					0	0	0			REV__ENSG00000148386|ENST00000619315|LCN9	REV__ENSG00000148386|ENST00000619315|LCN9	MSMS	GG20161007_CRH_Patient100_W632_01	3	350.1826660037041	3	350.181835	1047.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	88.288	1	89.344	88.844	89.844	1.0562								0	0	0	0.42693	1	37226	37226		1.1933	0	1		+		42989	10344	21071	21161	49670	49670					0.001814463437312952
YLAMDAKNLL	10	Unmodified	_YLAMDAKNLL_					0	0	0			REV__tr|A0A553SLW5|A0A553SLW5_NIACISensordomain-containingdiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_21415PE=4SV=1	REV__tr|A0A553SLW5|A0A553SLW5_NIACISensordomain-containingdiguanylatecyclaseOS=NialliacirculansOX=1397GN=CEQ21_21415PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3108398318291	2	576.310092	1150.60563	3.1593	0.0018207	-4.2183	-0.0024311	-1.0591	-0.00061035	576.3094750428893	60.684	0.50377	62.104	61.841	62.345	1.4196					34	15	3	0	0	0	0.80011	1	25529	25529		12.241	0.74595	1	2052700	+		42990	14998	21072	21162	49671	49671					0.03635225431139588
YLAPRGLVV	9	Unmodified	_YLAPRGLVV_					0	0	0			REV__ENST00000358741.3_2_X:70367436-70367481:+|nuORF	REV__ENST00000358741.3_2_X:70367436-70367481:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	494.3047363162041	2	494.302927	986.591301	2.5713	0.001271	-0.33485	-0.00016552	2.2365	0.0011055	494.3027441477681	47.647	0.36966	49.623	49.435	49.805	1.976					21	11	2	0	0	0	0.64949	1	19927	19927		9.3474	2.0582	1	2212600	+		42991	12577	21073	21163	49672	49672					0.09746941065179726
YLAQGLKLSP	10	Unmodified	_YLAQGLKLSP_					0	0	0		ENSG00000110108|ENST00000227525|TMEM109	ENSG00000110108|ENST00000227525|TMEM109	ENSG00000110108|ENST00000227525|TMEM109	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3192016482353	2	545.318774	1088.623	3.3617	0.0018332	-3.821	-0.0020837	-0.45931	-0.00025047	545.316138982897	73.192	0.87772	74.522	74.069	74.946	1.3297					58	27	3	0	0	0	0.89803	1	30639	30639		1.6526	0.17072	1	2053200			42992	1698	21074	21164	49673	49673					0.08222889028479585
YLARLMNLV	9	Unmodified	_YLARLMNLV_					0	0	0			REV__ENSG00000082213|ENST00000325366|C5orf22	REV__ENSG00000082213|ENST00000325366|C5orf22	MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8201171755791	2	546.815344	1091.61614	NaN	NaN	NaN	NaN	NaN	NaN	NaN	60.33	1	60.33	59.83	60.83	0								0	0	0	0.40883	1	25162	25162		7.9102	0	1		+		42993	8824	21075	21165	49674	49674					0.07399252876257378
YLCDMRFPV	9	Unmodified	_YLCDMRFPV_					0	0	0			REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.2718383669853	2	572.269912	1142.52527	2.1762	0.0012453	1.3627	0.00077982	3.5388	0.0020252	572.2702729464851	71.273	0.7294	72.614	72.392	73.122	1.3415					78	23	4	0	0	0	0.5697	1	30023	30023		12.532	3.9383	1	16598000	+		42994	12742	21076	21166	49675	49675					-0.040289591635428224
YLCDMRFPV	9	Unmodified	_YLCDMRFPV_					0	0	0			REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	REV__ENST00000378654.8_1_13:48517190-48517361:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	572.2715942263603	2	572.269912	1142.52527	0.99284	0.00056817	2.3214	0.0013285	3.3143	0.0018966	572.2709610090108	70.857	0.95221	72.695	72.411	73.363	1.8378					79	30	4	0	0	0	0.49082	1	29825	29825		15.847	3.3156	1	20682000	+		42995	12742	21076	21166	49676	49676					-0.040289591635428224
YLCPYFMLW	9	Unmodified	_YLCPYFMLW_					0	0	0			REV__tr|A0A553SF32|A0A553SF32_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08120PE=4SV=1	REV__tr|A0A553SF32|A0A553SF32_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_08120PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.2873412966728	2	618.285031	1234.55551	1.1329	0.00070044	0.92359	0.00057104	2.0565	0.0012715	618.2854990835029	48.552	0.30531	49.94	49.743	50.048	1.388					22	9	3	0	0	0	0.82604	1	20346	20346		2.3027	0	1	3042600	+		42996	14684	21077	21167	49677	49677					-0.05238600498341839
YLCSIKVGKK	10	Unmodified	_YLCSIKVGKK_					0	0	0			REV__ENST00000605322.1_1_10:5136636-5141836:+|nuORF	REV__ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	380.2282592654228	3	380.22661	1137.658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.343	1	76.65	76.15	77.15	1.3063								0	0	0	0.66218	1	31623	31623		0.77653	0	1		+		42997	14133	21078	21168	49678	49678					0.09467808564772895
YLCSIKVGKK	10	Unmodified	_YLCSIKVGKK_					0	0	0			REV__ENST00000605322.1_1_10:5136636-5141836:+|nuORF	REV__ENST00000605322.1_1_10:5136636-5141836:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	380.2287780642509	3	380.22661	1137.658	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.682	1	76.464	75.964	76.964	1.7817								0	0	0	0.66218	1	31326	31326		0.77653	0.31819	1		+		42998	14133	21078	21168	49679	49679					0.09467808564772895
YLDASLITV	9	Unmodified	_YLDASLITV_					0	0	0		ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	994.5446655154228	1	994.545539	993.538263	1.7542	0.0017446	-1.1991	-0.0011926	0.55507	0.00055204	994.5431901728741	68.3	0.2494	68.622	68.471	68.721	0.32224					11	7	2	0	0	0	0.24063	1	28582	28582		28.487	0	1	448490			42999	824	21079	21169	49680	49680					0.04123518491849154
YLDASLITV	9	Unmodified	_YLDASLITV_					0	0	0		ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	994.5474731326103	1	994.545539	993.538263	3.0629	0.0030462	-1.0485	-0.0010428	2.0143	0.0020034	994.5460246033944	67.152	0.33056	68.541	68.376	68.706	1.3888					17	10	2	0	0	0	0.10294	1	28153	28153		48.346	8.3885	1	1634100			43000	824	21079	21169	49681	49681					0.04123518491849154
YLDASLITV	9	Unmodified	_YLDASLITV_					0	0	0		ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5467407107353	1	994.545539	993.538263	1.9359	0.0019254	-2.7432	-0.0027282	-0.80725	-0.00080285	994.543892921765	66.713	0.26586	68.602	68.467	68.733	1.8889					15	8	2	0	0	0	0.12174	1	27994	27994		42.095	7.9921	1	1580600			43001	824	21079	21169	49682	49682					0.04123518491849154
YLDASLITV	9	Unmodified	_YLDASLITV_					0	0	0		ENSG00000067596|ENST00000262415|DHX8;ENST00000587044.1_1_17:41568567-41594747:+|nuORF	ENSG00000067596|ENST00000262415|DHX8	ENSG00000067596|ENST00000262415|DHX8	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	994.545539	993.538263	1.6063	0.0015976	-0.023323	-2.3196E-05	1.583	0.0015744	994.5461854842838	68.731	0.2184	68.731	68.581	68.799	0	0.10706	0.0010811	NaN	48.346	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	245400			43002	824	21079	21169							0.04123518491849154
YLDGHLITTV	10	Unmodified	_YLDGHLITTV_					0	0	0		ENST00000497615.1_1_1:1685693-1686165:-|nuORF;nc|ENSG00000008130|O95544-3|NADK;ENSG00000008130|ENST00000341426|NADK;nc|ENSG00000008130|O95544-2|NADK	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	566.3080322146416	2	566.305864	1130.59717	1.6651	0.00094298	2.3987	0.0013584	4.0639	0.0023014	566.3066052665193	48.167	0.25856	48.167	48.028	48.286	0					12	7	2	0	0	0	0.77604	1	20121	20121		14.838	6.0929	1	418410			43003	526	21080	21170	49683	49683					0.037099947861634064
YLDGHLITTV	10	Unmodified	_YLDGHLITTV_					0	0	0		ENST00000497615.1_1_1:1685693-1686165:-|nuORF;nc|ENSG00000008130|O95544-3|NADK;ENSG00000008130|ENST00000341426|NADK;nc|ENSG00000008130|O95544-2|NADK	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	ENST00000497615.1_1_1:1685693-1686165:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.8111450076103	2	566.305864	1130.59717	1.6402	0.00092888	2.1126	0.0011964	3.7529	0.0021253	566.3072387720827	47.786	0.20668	48.117	47.989	48.196	0.33034					9	6	2	0	0	0	0.5476	1	20038	20038		25.399	11.891	1	659960			43004	526	21080	21170	49684	49684					0.037099947861634064
YLDIKGLLDV	10	Unmodified	_YLDIKGLLDV_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.8327514529228	2	574.831714	1147.64888	1.6421	0.00094396	0.16271	9.3531E-05	1.8049	0.0010375	574.8317220880047	77.888	0.65656	77.888	77.658	78.314	0					57	20	4	0	0	0	0.068074	4	32416	32369;32416;32454;32498		108.26	56.632	1	10823000			43005	1827	21081	21171	49685;49686;49687;49688	49686					0.0809573848009677
YLDIKGLLDV	10	Unmodified	_YLDIKGLLDV_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.8325683474541	2	574.831714	1147.64888	1.878	0.0010795	-0.67949	-0.00039059	1.1985	0.00068894	574.8313469702076	77.427	0.6273	77.744	77.479	78.107	0.31653					62	19	4	0	0	0	0.045213	3	32369	32322;32369;32410		80.896	35.196	1	10524000			43006	1827	21081	21171	49689;49690;49691	49690					0.0809573848009677
YLDIKGLLDV	10	Unmodified	_YLDIKGLLDV_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.8334228396416	2	574.831714	1147.64888	2.4877	0.00143	0.19554	0.0001124	2.6832	0.0015424	574.8318899020289	76.42	0.71023	77.714	77.458	78.168	1.2938					68	22	5	0	0	0	0.0487	3	32071	32030;32071;32110		101.54	55.844	1	31867000			43007	1827	21081	21171	49692;49693;49694	49693					0.0809573848009677
YLDIKGLLDV	10	Unmodified	_YLDIKGLLDV_					0	0	0		nc|ENSG00000113558|P63208-2|SKP1;ENSG00000113558|ENST00000353411|SKP1	nc|ENSG00000113558|P63208-2|SKP1	nc|ENSG00000113558|P63208-2|SKP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8337890505791	2	574.831714	1147.64888	2.7662	0.0015901	-0.15655	-8.999E-05	2.6097	0.0015001	574.8314632003401	75.876	0.52296	77.644	77.449	77.972	1.7672					45	16	4	0	0	0	0.048489	3	31874	31790;31835;31874		85.764	40.065	1	22045000			43008	1827	21081	21171	49695;49696;49697	49697					0.0809573848009677
YLDKFFTLV	9	Unmodified	_YLDKFFTLV_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3188354372978	2	573.3157	1144.61685	2.8507	0.0016343	0.43473	0.00024924	3.2854	0.0018836	573.3156837995107	75.151	0.58685	76.457	76.09	76.677	1.3063					34	18	3	0	0	0	0.23535	1	31535	31535		29.082	3.6823	1	1243600			43009	2417	21082	21172	49698	49698					0.05032370796948271
YLDKFFTLV	9	Unmodified	_YLDKFFTLV_					0	0	0		ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	ENSG00000130158|ENST00000294618|DOCK6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	573.3157	1144.61685	2.9014	0.0016634	1.42	0.00081412	4.3214	0.0024775	573.3170902254374	74.624	0.25154	76.405	76.292	76.543	1.7817	-0.026029	0.00072361	NaN	29.082	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1116400			43010	2417	21082	21172							0.05032370796948271
YLDKTEFQV	9	Unmodified	_YLDKTEFQV_					0	0	0		tr|A0A553SN11|A0A553SN11_NIACISHSPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23470PE=4SV=1	tr|A0A553SN11|A0A553SN11_NIACISHSPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23470PE=4SV=1	tr|A0A553SN11|A0A553SN11_NIACISHSPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_23470PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.7914916872978	2	571.790047	1141.56554	2.5215	0.0014418	1.2095	0.00069158	3.731	0.0021333	571.7906643052738	76.213	0.32973	77.507	77.401	77.731	1.2938					21	10	3	0	0	0	0.44535	1	32003	32003		18.135	5.0925	1	1900500			43011	16407	21083	21173	49699	49699					0.0004200203222808341
YLDLFGDPSV	10	Unmodified	_YLDLFGDPSV_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS;ENST00000424976.1_1_1:187532898-187533042:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	563.2771484255791	2	563.276772	1124.53899	1.3895	0.0007827	-1.6426	-0.00092522	-0.25302	-0.00014252	563.2758361860431	77.633	0.40187	77.633	77.409	77.811	0					26	12	3	0	0	0	0.24174	2	32306	32306;32354		43.858	26.745	1	1214000			43012	3572	21084	21174	49700;49701	49700					-0.01829686859082358
YLDLFGDPSV	10	Unmodified	_YLDLFGDPSV_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS;ENST00000424976.1_1_1:187532898-187533042:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	563.2762328982353	2	563.276772	1124.53899	1.9441	0.0010951	-1.4966	-0.00084301	0.44749	0.00025206	563.2760872178374	77.263	0.43982	77.58	77.292	77.732	0.31653					21	13	2	0	0	0	0.32206	2	32270	32270;32339		37.974	20.861	1	1763400			43013	3572	21084	21174	49702;49703	49702					-0.01829686859082358
YLDLFGDPSV	10	Unmodified	_YLDLFGDPSV_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS;ENST00000424976.1_1_1:187532898-187533042:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2778808474541	2	563.276772	1124.53899	2.7487	0.0015483	-2.0913	-0.001178	0.65749	0.00037035	563.2758909917961	75.815	0.41782	77.582	77.333	77.751	1.7672					29	13	3	0	0	0	0.35292	1	31817	31817		36.127	14.38	1	2092200			43014	3572	21084	21174	49704	49704					-0.01829686859082358
YLDLFGDPSV	10	Unmodified	_YLDLFGDPSV_					0	0	0		ENST00000489324.1_1_1:155289446-155290397:+|nuORF;nc|ENSG00000160752|P14324-2|FDPS;ENSG00000160752|ENST00000368356|FDPS;ENST00000424976.1_1_1:187532898-187533042:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	ENST00000489324.1_1_1:155289446-155290397:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	563.276772	1124.53899	2.5707	0.001448	-1.2481	-0.000703	1.3227	0.00074503	563.276009130226	76.265	0.54596	77.559	77.341	77.887	1.2938	-0.029704	0.00042572	NaN	43.858	38	17	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3150200			43015	3572	21084	21174							-0.01829686859082358
YLDLVDHV	8	Unmodified	_YLDLVDHV_					0	0	0			REV__ENSG00000156502|ENST00000359655|SUPV3L1	REV__ENSG00000156502|ENST00000359655|SUPV3L1	MSMS	GG20161007_CRH_Patient100_A02_01	1	487.2551452517509	2	487.2531	972.491647	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.73	1	103.73	103.23	104.23	0								0	0	0	1.0178	1	43615	43615		2.5775	0	1		+		43016	10514	21085	21175	49705	49705					0.004300786605767826
YLDLYRLADL	10	Unmodified	_YLDLYRLADL_					0	0	0		KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant;KLHL32|p.Q229Tfs*32|1|0.09|ENSG00000186231|chr6:97113837-97113838|-/TTACTTTTTCTTTTCT|frameshift_variant;nc|ENSG00000186231|Q96NJ5-3|KLHL32;nc|ENSG00000186231|Q96NJ5-2|KLHL32;ENSG00000186231|ENST00000369261|KLHL32	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	628.3853027224541	2	627.840071	1253.66559	2.1812	0.0013694	-0.99068	-0.00062199	1.1905	0.00074745	627.8398558807027	80.439	0.28419	80.439	80.257	80.541	0					14	8	2	0	0	0	0.12519	1	33438	33438		7.2892	0	1	506530			43017	4782	21086	21176	49706	49706					0.04890239366068272
YLDLYRLADL	10	Unmodified	_YLDLYRLADL_					0	0	0		KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant;KLHL32|p.Q229Tfs*32|1|0.09|ENSG00000186231|chr6:97113837-97113838|-/TTACTTTTTCTTTTCT|frameshift_variant;nc|ENSG00000186231|Q96NJ5-3|KLHL32;nc|ENSG00000186231|Q96NJ5-2|KLHL32;ENSG00000186231|ENST00000369261|KLHL32	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	628.3843261599541	2	627.840071	1253.66559	1.7451	0.0010956	-0.77796	-0.00048843	0.96715	0.00060721	627.8401788758341	79.993	0.28477	80.294	80.1	80.385	0.30046					16	8	3	0	0	0	0.12493	1	33405	33405		6.7232	2.3939	1	508760			43018	4782	21086	21176	49707	49707					0.04890239366068272
YLDLYRLADL	10	Unmodified	_YLDLYRLADL_					0	0	0		KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant;KLHL32|p.Q229Tfs*32|1|0.09|ENSG00000186231|chr6:97113837-97113838|-/TTACTTTTTCTTTTCT|frameshift_variant;nc|ENSG00000186231|Q96NJ5-3|KLHL32;nc|ENSG00000186231|Q96NJ5-2|KLHL32;ENSG00000186231|ENST00000369261|KLHL32	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	628.3846313357353	2	627.840071	1253.66559	2.5375	0.0015932	-1.5952	-0.0010015	0.94235	0.00059164	627.8392785470166	79.095	0.24673	80.362	80.193	80.439	1.2668					13	7	2	0	0	0	0.12461	1	33198	33198		14.838	3.198	1	1224500			43019	4782	21086	21176	49708	49708					0.04890239366068272
YLDLYRLADL	10	Unmodified	_YLDLYRLADL_					0	0	0		KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant;KLHL32|p.Q229Tfs*32|1|0.09|ENSG00000186231|chr6:97113837-97113838|-/TTACTTTTTCTTTTCT|frameshift_variant;nc|ENSG00000186231|Q96NJ5-3|KLHL32;nc|ENSG00000186231|Q96NJ5-2|KLHL32;ENSG00000186231|ENST00000369261|KLHL32	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	KLHL32|p.Q229Lfs*12|1|0.05|ENSG00000186231|chr6:97113839-97113840|-/CTTCCTGACTGTTA|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	628.3843871951103	2	627.840071	1253.66559	1.8115	0.0011373	-0.72551	-0.0004555	1.086	0.00068184	627.8393668759799	78.619	0.34148	80.354	80.165	80.506	1.735					19	10	3	0	0	0	0.12461	1	32922	32922		10.074	6.1295	1	1403400			43020	4782	21086	21176	49709	49709					0.04890239366068272
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1025.534106433392	1	1025.53022	1024.52295	1.7789	0.0018243	1.0129	0.0010387	2.7918	0.0028631	1025.5313684386308	65.838	0.41419	65.838	65.644	66.058	0					29	12	3	0	0	0	0.083604	2	27419	27419;27474		54.774	18.729	1	2028100			43021	4005	21087	21177	49710;49711	49710					0.011666516946661432
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1025.535327136517	1	1025.53022	1024.52295	2.3097	0.0023687	-0.50697	-0.00051991	1.8028	0.0018488	1025.5298761164695	65.394	0.44376	65.721	65.517	65.96	0.32689					27	13	3	0	0	0	0.083604	2	27354	27354;27404		54.774	18.729	1	1876200			43022	4005	21087	21177	49712;49713	49712					0.011666516946661432
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1025.533007800579	1	1025.53022	1024.52295	2.2835	0.0023418	0.24634	0.00025263	2.5298	0.0025944	1025.5305923467859	64.288	0.43121	65.695	65.433	65.865	1.4071					36	13	4	0	0	0	0.037761	3	26952	26906;26952;27008		78.149	20.678	1	6746100			43023	4005	21087	21177	49714;49715;49716	49715					0.011666516946661432
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2702514529228	2	513.26875	1024.52295	3.1755	0.0016299	0.0195	1.0008E-05	3.195	0.0016399	513.268865306144	64.251	0.36692	65.659	65.466	65.833	1.4071					21	11	3	0	0	0	0.049839	1	26932	26932		68.081	23.674	1	4249400			43024	4005	21087	21177	49717	49717					0.011666516946661432
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1025.532763659954	1	1025.53022	1024.52295	3.1987	0.0032804	-0.60522	-0.00062067	2.5935	0.0026597	1025.5293491323873	63.761	0.43162	65.689	65.457	65.888	1.928					37	13	4	0	0	0	0.049839	2	26770	26720;26770		68.081	31.954	1	5712400			43025	4005	21087	21177	49718;49719	49719					0.011666516946661432
YLDNGVVFV	9	Unmodified	_YLDNGVVFV_					0	0	0		ENSG00000167986|ENST00000301764|DDB1;ENST00000539712.5_1_11:61089040-61094332:-|nuORF;ENST00000545930.5_1_11:61082914-61091715:-|nuORF	ENSG00000167986|ENST00000301764|DDB1	ENSG00000167986|ENST00000301764|DDB1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	513.26875	1024.52295	1.9861	0.0010194	0.2323	0.00011923	2.2184	0.0011387	513.268622142836	65.913	0.25266	65.913	65.708	65.961	0	0.14925	0.00025622	NaN	68.081	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1448800			43026	4005	21087	21177							0.011666516946661432
YLDQGTQIFL	10	Unmodified	_YLDQGTQIFL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	599.3119384646416	2	599.311146	1196.60774	1.9116	0.0011457	-0.10948	-6.5615E-05	1.8022	0.00108	599.3110199016764	69.913	0.4436	69.913	69.643	70.087	0					42	13	4	0	0	0	0.1353	3	29079	29030;29079;29127		57.722	32.323	1	5441900			43027	4974	21088	21178	49720;49721;49722	49721					0.017299774406183133
YLDQGTQIFL	10	Unmodified	_YLDQGTQIFL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.3126708865166	2	599.311146	1196.60774	1.2666	0.0007591	0.57166	0.0003426	1.8383	0.0011017	599.3114981785222	69.383	0.47098	69.705	69.501	69.972	0.32224					44	14	4	0	0	0	0.1353	3	29007	29007;29056;29099		57.722	28.64	1	5443800			43028	4974	21088	21178	49723;49724;49725	49723					0.017299774406183133
YLDQGTQIFL	10	Unmodified	_YLDQGTQIFL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.3137084841728	2	599.311146	1196.60774	2.2641	0.0013569	0.48677	0.00029173	2.7508	0.0016486	599.3113372218932	68.313	0.64492	69.691	69.271	69.916	1.3778					56	20	5	0	0	0	0.057404	3	28721	28621;28666;28721		75.761	31.903	1	15331000			43029	4974	21088	21178	49726;49727;49728	49728					0.017299774406183133
YLDQGTQIFL	10	Unmodified	_YLDQGTQIFL_					0	0	0		ENSG00000197006|ENST00000358154|METTL9;nc|ENSG00000197006|Q9H1A3-2|METTL9	ENSG00000197006|ENST00000358154|METTL9	ENSG00000197006|ENST00000358154|METTL9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.3117553591728	2	599.311146	1196.60774	2.0502	0.0012287	-0.32313	-0.00019366	1.7271	0.0010351	599.3109024194592	67.814	0.52356	69.684	69.394	69.917	1.87					51	16	4	0	0	0	0.086078	3	28501	28395;28445;28501		66.457	30.33	1	7960500			43030	4974	21088	21178	49729;49730;49731	49731					0.017299774406183133
YLDRFLAGV	9	Unmodified	_YLDRFLAGV_					0	0	0		ENSG00000118971|ENST00000261254|CCND2;nc|ENSG00000118971|P30279-2|CCND2	ENSG00000118971|ENST00000261254|CCND2	ENSG00000118971|ENST00000261254|CCND2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.2899658083916	2	527.290017	1052.56548	2.4202	0.0012762	-1.2589	-0.00066379	1.1613	0.00061237	527.2894025828261	56.875	0.1515	57.196	57.109	57.261	0.32103					7	4	2	0	0	0	0.13623	1	23870	23870		40.239	10.014	1	522770			43031	2053	21089	21179	49732	49732					0.04130046822888289
YLDVSLKTF	9	Unmodified	_YLDVSLKTF_					0	0	0			REV__SLC5A3|p.A278Gfs*6|1|0.05|ENSG00000198743|chr21:34096029-34096030|-/GGCAGGATCTGGA|frameshift_variant	REV__SLC5A3|p.A278Gfs*6|1|0.05|ENSG00000198743|chr21:34096029-34096030|-/GGCAGGATCTGGA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2997314333916	2	543.297507	1084.58046	2.5426	0.0013814	0.98917	0.00053741	3.5317	0.0019188	543.2983230249254	80.898	0.37276	82.594	82.425	82.798	1.6959					17	11	2	0	0	0	0.54523	1	33936	33936		13.508	0	1	2303000	+		43032	11733	21090	21180	49733	49733					0.04155493900225338
YLDWTIERV	9	Unmodified	_YLDWTIERV_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	597.8156005740166	2	597.811313	1193.60807	2.3372	0.0013972	0.56216	0.00033606	2.8993	0.0017333	597.8117572060065	58.705	0.28994	58.705	58.526	58.816	0					14	8	2	0	0	0	0.26473	1	24465	24465		27.223	11.975	1	1275800			43033	2731	21091	21181	49734	49734					0.019013971604636026
YLDWTIERV	9	Unmodified	_YLDWTIERV_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8123657107353	2	597.811313	1193.60807	2.323	0.0013887	0.90568	0.00054143	3.2287	0.0019302	597.8119813509379	58.218	0.28671	58.541	58.396	58.683	0.32298					15	8	2	0	0	0	0.19659	1	24409	24409		33.445	17.296	1	1261700			43034	2731	21091	21181	49735	49735					0.019013971604636026
YLDWTIERV	9	Unmodified	_YLDWTIERV_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.8123657107353	2	597.811313	1193.60807	1.6623	0.00099374	0.029011	1.7343E-05	1.6913	0.0010111	597.8115362661225	57.035	0.27236	58.45	58.307	58.58	1.4145					19	8	3	0	0	0	0.060242	2	23887	23887;23938		63.961	22.005	1	4249400			43035	2731	21091	21181	49736;49737	49736					0.019013971604636026
YLDWTIERV	9	Unmodified	_YLDWTIERV_					0	0	0		KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant;nc|ENSG00000136636|Q9Y597-2|KCTD3;ENSG00000136636|ENST00000259154|KCTD3	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	KCTD3|p.P411Lfs*25|1|0.13|ENSG00000136636|chr1:215604222-215604223|-/CTTACCCCATCCACTGCCTGCACCTGTTCCCT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.8118774294853	2	597.811313	1193.60807	1.0268	0.00061383	0.11717	7.0044E-05	1.144	0.00068387	597.811378829992	56.503	0.35849	58.472	58.273	58.631	1.9684					18	11	2	0	0	0	0.13623	2	23665	23665;23719		40.239	13.356	1	3228900			43036	2731	21091	21181	49738;49739	49738					0.019013971604636026
YLEDFITNI	9	Unmodified	_YLEDFITNI_					0	0	0		nc|ENSG00000138190|Q8TAG9-2|EXOC6;ENSG00000138190|ENST00000260762|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	564.2869140505791	2	564.284597	1126.55464	1.3643	0.00076983	-0.068679	-3.8754E-05	1.2956	0.00073107	564.2839605976328	79.191	0.3308	79.191	78.968	79.298	0					14	10	2	0	0	0	0.44535	1	32957	32957		18.135	4.6271	1	1284400			43037	2823	21092	21182	49740	49740					-0.003574003420453664
YLEDFITNI	9	Unmodified	_YLEDFITNI_					0	0	0		nc|ENSG00000138190|Q8TAG9-2|EXOC6;ENSG00000138190|ENST00000260762|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	564.2828246951103	2	564.284597	1126.55464	1.5867	0.00089535	-2.7742	-0.0015655	-1.1875	-0.0006701	564.2828534108662	78.756	0.27189	79.065	78.895	79.167	0.30933					18	8	3	0	0	0	0.34572	1	32921	32921		23.148	9.6405	1	905230			43038	2823	21092	21182	49741	49741					-0.003574003420453664
YLEDFITNI	9	Unmodified	_YLEDFITNI_					0	0	0		nc|ENSG00000138190|Q8TAG9-2|EXOC6;ENSG00000138190|ENST00000260762|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	564.2855712771416	2	564.284597	1126.55464	2.531	0.0014282	-0.91577	-0.00051676	1.6152	0.00091146	564.2839676681376	77.897	0.36951	79.178	78.95	79.319	1.2809					30	11	3	0	0	0	0.10294	2	32701	32652;32701		48.346	21.462	1	3892000			43039	2823	21092	21182	49742;49743	49743					-0.003574003420453664
YLEDFITNI	9	Unmodified	_YLEDFITNI_					0	0	0		nc|ENSG00000138190|Q8TAG9-2|EXOC6;ENSG00000138190|ENST00000260762|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	nc|ENSG00000138190|Q8TAG9-2|EXOC6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2864868044853	2	564.284597	1126.55464	1.1488	0.00064826	0.30013	0.00016936	1.449	0.00081762	564.2846614245881	77.486	0.31133	79.238	79.009	79.32	1.7514					25	9	3	0	0	0	0.059546	2	32465	32465;32521		64.236	35.749	1	3661900			43040	2823	21092	21182	49744;49745	49744					-0.003574003420453664
YLEDKSYKL	9	Unmodified	_YLEDKSYKL_					0	0	0		ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant;ENSG00000204186|ENST00000374423|ZDBF2	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	ZDBF2|p.G2318Rfs*12|1|0.09|ENSG00000204186|chr2:206311479-206311480|-/AGAGCTGTGGATATAAT|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	579.8070556521416	2	579.805697	1157.59684	2.0242	0.0011736	0.70511	0.00040883	2.7293	0.0015825	579.8057802518548	76.801	0.37894	77.117	76.913	77.292	0.31654					35	11	4	0	0	0	0.75267	1	32183	32183		5.2307	0	1	5112600			43041	5127	21093	21183	49746	49746					0.024345750663314902
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	571.2936889529228	2	571.292422	1140.57029	1.5851	0.00090554	0.79879	0.00045634	2.3839	0.0013619	571.2928691954489	77.163	0.56171	77.163	76.909	77.47	0					50	17	4	0	0	0	0.042029	4	32117	32069;32117;32156;32198		74.423	32.072	1	11985000			43042	3064	21094	21184	49747;49748;49749;49750	49748					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1141.584521472454	1	1141.57757	1140.57029	1.9366	0.0022108	-0.32944	-0.00037608	1.6072	0.0018347	1141.5777731717628	77.143	0.31357	77.143	76.971	77.284	0					18	9	3	0	0	0	0.15635	1	32097	32097		37.974	7.3375	1	1493100			43043	3064	21094	21184	49751	49751					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	571.2938110232353	2	571.292422	1140.57029	2.0211	0.0011546	0.42191	0.00024103	2.443	0.0013957	571.2926290449743	76.801	0.50573	77.118	76.882	77.387	0.31653					51	15	5	0	0	0	0.037761	4	32110	32063;32110;32148;32195		78.149	40.175	1	16386000			43044	3064	21094	21184	49752;49753;49754;49755	49753					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1141.580737292767	1	1141.57757	1140.57029	3.3163	0.0037858	-1.3582	-0.0015505	1.9581	0.0022353	1141.576087645041	76.758	0.31549	77.075	76.944	77.259	0.31653					18	9	3	0	0	0	0.045797	1	32099	32099		71.134	27.275	1	1681700			43045	3064	21094	21184	49756	49756					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.2941772341728	2	571.292422	1140.57029	2.4711	0.0014117	0.84352	0.00048189	3.3146	0.0018936	571.2929423606704	75.883	0.91299	77.177	76.818	77.731	1.2938					81	29	5	0	0	0	0.042029	4	31851	31756;31800;31851;31911		74.423	30.731	1	42361000			43046	3064	21094	21184	49757;49758;49759;49760	49759					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1141.580859363079	1	1141.57757	1140.57029	2.08	0.0023745	0.97579	0.0011139	3.0558	0.0034884	1141.5782027090406	75.85	0.42805	77.143	76.943	77.371	1.2938					31	13	3	0	0	0	0.033794	1	31807	31807		81.613	13.532	1	7038800			43047	3064	21094	21184	49761	49761					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.2944824099541	2	571.292422	1140.57029	2.7625	0.0015782	0.28801	0.00016454	3.0505	0.0017427	571.2926261447986	75.395	0.79026	77.176	76.913	77.704	1.7817					82	25	6	0	0	0	0.042029	4	31559	31559;31601;31640;31680		74.423	42.117	1	44834000			43048	3064	21094	21184	49762;49763;49764;49765	49762					0.005628861749983116
YLEEFITNI	9	Unmodified	_YLEEFITNI_					0	0	0		nc|ENSG00000144036|Q9Y2D4-2|EXOC6B;ENSG00000144036|ENST00000272427|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	nc|ENSG00000144036|Q9Y2D4-2|EXOC6B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1141.580493152142	1	1141.57757	1140.57029	2.5065	0.0028613	-0.18635	-0.00021273	2.3201	0.0026486	1141.576921448659	75.399	0.39968	77.181	76.978	77.377	1.7817					29	12	3	0	0	0	0.045797	2	31595	31595;31646		71.134	21.201	1	7248800			43049	3064	21094	21184	49766;49767	49766					0.005628861749983116
YLEHCNNFIYE	11	Unmodified	_YLEHCNNFIYE_					0	0	0			REV__ENSG00000130477|ENST00000519716|UNC13A	REV__ENSG00000130477|ENST00000519716|UNC13A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	722.8175536990166	2	722.813727	1443.6129	0.9789	0.00070756	2.8106	0.0020315	3.7895	0.0027391	722.8160325715148	19.676	0.50046	19.676	19.416	19.917	0					42	15	5	0	0	0	0.84946	1	8144	8144		11.495	2.1116	1	14229000	+		43050	9786	21095	21185	49768	49768					-0.09116086759058817
YLEILKNSI	9	Unmodified	_YLEILKNSI_					0	0	0			REV__tr|A0A7D6W322|A0A7D6W322_9CLOTSerine/threonineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08600PE=4SV=1	REV__tr|A0A7D6W322|A0A7D6W322_9CLOTSerine/threonineproteinkinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_08600PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.8184692263603	2	546.818607	1091.62266	1.5508	0.00084798	-0.28389	-0.00015524	1.2669	0.00069275	546.8186109106646	76.026	0.34474	76.026	75.82	76.164	0					27	10	3	0	0	0	0.66839	1	31681	31681		8.5933	0	1	2696700	+		43051	15607	21096	21186	49769	49769					0.08051469308611559
YLEKLVLTKD	10	Unmodified	_YLEKLVLTKD_					0	0	0		tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	611.3581420779228	2	611.358096	1220.70164	2.531	0.0015474	-2.4528	-0.0014995	0.07822	4.7821E-05	611.3563310597898	78.504	2.6867	79.771	78.842	81.529	1.2668					223	86	5	0	0	0	0.87699	2	32932	32932;33038		3.9444	0	1	7141600			43052	17196	21097	21187	49770;49771	49770					0.10011696542892423
YLEKLVLTKD	10	Unmodified	_YLEKLVLTKD_					0	0	0		tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	tr|A0A7D6ZYG3|A0A7D6ZYG3_9CLOTDiguanylatecyclaseOS=ClostridiumintestinaleOX=36845GN=HZF06_16300PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3583251833916	2	611.358096	1220.70164	1.8236	0.0011148	-2.3144	-0.0014149	-0.49082	-0.00030007	611.3565356590756	78.246	1.8515	79.981	79.056	80.908	1.735					139	59	3	0	0	0	0.87699	1	32778	32778		3.9444	0	1	5176900			43053	17196	21097	21187	49772	49772					0.10011696542892423
YLEVEEYEL	9	Unmodified	_YLEVEEYEL_					0	0	0			REV__nc|ENSG00000067840|Q76G19|PDZD4	REV__nc|ENSG00000067840|Q76G19|PDZD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.7827636599541	2	593.779344	1185.54414	2.5233	0.0014983	3.3056	0.0019628	5.8289	0.0034611	593.7807968433186	44.403	1.1439	45.768	45.419	46.563	1.3653					89	35	4	0	0	0	0.27148	1	18550	18550		26.884	2.8631	1	3001500	+		43054	8696	21098	21188	49773	49773					-0.04121427787140419
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	605.8464233279228	2	605.845156	1209.67576	2.3768	0.00144	-0.6838	-0.00041427	1.693	0.0010257	605.8450279789913	48.986	0.63454	48.986	48.778	49.413	0					35	19	3	0	0	0	0.062093	2	20470	20421;20470		63.227	22.988	1	1524200			43055	3165	21099	21189	49774;49775	49775					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.2333862185478	3	404.23253	1209.67576	0.62371	0.00025213	0.99022	0.00040028	1.6139	0.0006524	404.23279426113845	48.965	0.82229	48.965	48.68	49.503	0					55	25	3	0	0	0	0.20244	1	20450	20450		24.882	3.0821	1	2868800			43056	3165	21099	21189	49776	49776					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	605.8466674685478	2	605.845156	1209.67576	1.6342	0.00099005	-0.49259	-0.00029844	1.1416	0.00069162	605.8455347935545	48.413	0.5766	48.743	48.556	49.133	0.33034					41	18	3	0	0	0	0.037863	2	20282	20282;20331		78.06	21.883	1	2500600			43057	3165	21099	21189	49777;49778	49777					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.2331420779228	3	404.23253	1209.67576	1.8697	0.00075581	-0.26011	-0.00010514	1.6096	0.00065067	404.2322807399528	48.399	0.70022	48.729	48.556	49.256	0.33034					49	22	3	0	0	0	0.28372	1	20330	20330		19.626	6.77	1	4018700			43058	3165	21099	21189	49779	49779					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.2332336306572	3	404.23253	1209.67576	1.6916	0.00068381	0.2022	8.1735E-05	1.8938	0.00076555	404.2326404361844	46.851	1.0225	48.233	47.964	48.986	1.3825					75	31	4	0	0	0	0.10473	3	19637	19600;19637;19692		37.075	6.0111	1	8485200			43059	3165	21099	21189	49780;49781;49782	49781					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	605.7737304568291	2	605.845156	1209.67576	2.019	0.0012232	-0.45059	-0.00027299	1.5684	0.00095021	605.8452784034384	46.899	0.76548	48.282	48.027	48.792	1.3825					46	23	3	0	0	0	0.090704	1	19813	19813		29.841	9.426	1	4878000			43060	3165	21099	21189	49783	49783					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.2333862185478	3	404.23253	1209.67576	1.503	0.00060756	0.26784	0.00010827	1.7708	0.00071583	404.2326825484614	46.392	0.86728	48.362	48.126	48.993	1.9703					58	27	4	0	0	0	0.093059	2	19450	19402;19450		40.725	13.637	1	9501600			43061	3165	21099	21189	49784;49785	49785					0.07930847091279247
YLFERIKEL	9	Unmodified	_YLFERIKEL_					0	0	0		nc|ENSG00000146842|Q96SK2-2|TMEM209;ENSG00000146842|ENST00000397622|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	nc|ENSG00000146842|Q96SK2-2|TMEM209	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	605.845156	1209.67576	1.608	0.0009742	0.23084	0.00013986	1.8388	0.0011141	605.845633947246	46.36	0.42976	48.33	48.126	48.556	1.9703	0.024342	0.00039867	NaN	18.373	35	13	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5156500			43062	3165	21099	21189							0.07930847091279247
YLFFKYRKIRK	11	Unmodified	_YLFFKYRKIRK_					0	0	0		tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	tr|A0A7D6VQM6|A0A7D6VQM6_9CLOTPolysaccharidebiosynthesisproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_21740PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	391.2857238650322	4	391.239599	1560.92929	3.9753	0.0015553	-0.050802	-1.9876E-05	3.9245	0.0015354	391.23901272498534	90.208	0.31803	91.228	91.022	91.34	1.0199					12	9	2	0	0	0	0.14606	1	38027	38027		0	0	1	483450			43063	16803	21100	21190	49786	49786					0.17126119261365602
YLFFRFGF	8	Unmodified	_YLFFRFGF_					0	0	0		SLC22A14|p.I244F|1|0.04|ENSG00000144671|chr3:38307675-38307675|A/T|missense_variant	SLC22A14|p.I244F|1|0.04|ENSG00000144671|chr3:38307675-38307675|A/T|missense_variant	SLC22A14|p.I244F|1|0.04|ENSG00000144671|chr3:38307675-38307675|A/T|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	548.3469116091728	2	548.78437	1095.55419	3.1582	0.0017332	2.0416	0.0011204	5.1998	0.0028536	548.7840963572356	81.437	0.3411	82.67	82.595	82.936	1.2332					14	10	2	0	0	0	2.3239	1	34194	34194		2.8892	0	1	474390			43064	15958	21101	21191	49787	49787					0.010232695194417829
YLFIYYLIQF	10	Unmodified	_YLFIYYLIQF_					0	0	0		ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	ENSG00000188921|ENST00000495827|HACD4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	462.1451904177666	3	461.58468	1381.73221	1.8266	0.00084311	3.1964	0.0014754	5.023	0.0023185	461.9206444228623	39.338	0.24505	41.174	41.007	41.252	1.8366					13	7	2	0	0	0	0.12554	1	16487	16487		2.086	0.63089	1	1256400			43065	4886	21102	21192	49788	49788					0.05661474927933341
YLFKRFIF	8	Unmodified	_YLFKRFIF_					0	0	0		ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3309814333916	2	567.328945	1132.64334	2.0865	0.0011837	2.1973	0.0012466	4.2838	0.0024303	567.3301822741985	71.364	1.4131	72.705	72.117	73.53	1.3415					68	45	2	0	0	0	0.87655	2	29947	29947;30143		11.114	0	1	2629200			43066	6515	21103	21193	49789;49790	49789					0.08232104478929614
YLFKRFIF	8	Unmodified	_YLFKRFIF_					0	0	0		ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3329955935478	2	567.328945	1132.64334	5.7814	0.0032799	0.73826	0.00041883	6.5196	0.0036988	567.329312691302	88.991	0.32191	90.047	89.853	90.175	1.0562					18	9	3	0	0	0	0.88409	1	37513	37513		6.3541	0	1	781820			43067	6515	21103	21193	49791	49791					0.08232104478929614
YLFKRFIF	8	Unmodified	_YLFKRFIF_					0	0	0		ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	ENST00000433529.6_1_2:70439571-70439754:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3304931521416	2	567.328945	1132.64334	1.3794	0.00078255	2.378	0.0013491	3.7574	0.0021317	567.3305498186903	71.32	1.1118	73.144	72.458	73.57	1.824					57	35	2	0	0	0	0.88409	1	29894	29894		6.3541	0	1	3066800			43068	6515	21103	21193	49792	49792					0.08232104478929614
YLFLGGILM	9	Oxidation (M)	_YLFLGGILM(Oxidation (M))_		YLFLGGILM(1)		YLFLGGILM(80)	0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1042.580371081829	1	1042.56417	1041.55689	4.9733	0.005185	3.3842	0.0035282	8.3575	0.0087132	1042.5688322691326	89.372	0.19114	90.392	90.333	90.524	1.0199					8	5	2	0	0	0	0.035716	1	37671	37671		79.935	39.486	1	825100			43069	2885	21104	21194	49793	49793		52			0.03777356862065062
YLFLGGILM	9	Oxidation (M)	_YLFLGGILM(Oxidation (M))_					0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1042.56417	1041.55689	2.2687	0.0023652	-1.989	-0.0020736	0.2797	0.00029161	1042.5647825514263	90.666	0.19032	90.666	90.588	90.779	0	0.16334	-0.0015348	NaN	79.935	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	454170			43070	2885	21104	21194				52			0.03777356862065062
YLFLGGILM	9	Oxidation (M)	_YLFLGGILM(Oxidation (M))_					0	0	1		nc|ENSG00000139644|P55061-2|TMBIM6;ENSG00000139644|ENST00000267115|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	nc|ENSG00000139644|P55061-2|TMBIM6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1042.56417	1041.55689	5.8077	0.0060549	-1.1985	-0.0012495	4.6092	0.0048054	1042.5623074232567	89.004	0.1596	90.45	90.37	90.53	1.4467	-0.052491	-0.00071062	NaN	79.935	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	951600			43071	2885	21104	21194				52			0.03777356862065062
YLFLWLVSIG	10	Unmodified	_YLFLWLVSIG_					0	0	0			REV__tr|A0A553STK7|A0A553STK7_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_05320PE=3SV=1	REV__tr|A0A553STK7|A0A553STK7_NIACICytochromedubiquinoloxidasesubunitIIOS=NialliacirculansOX=1397GN=CEQ21_05320PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	404.2333557009697	3	404.23387	1209.67978	0.62371	0.00025213	-2.327	-0.00094064	-1.7033	-0.00068851	404.23279426113845	48.965	0.82229	48.965	48.68	49.503	0					55	25	3	0	0	0	0.5476	1	20496	20496		16.566	0	1	2868800	+		43072	15244	21105	21195	49794	49794					0.08332936584974959
YLFNSVVNV	9	Unmodified	_YLFNSVVNV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENSG00000166793|ENST00000300022|YPEL4	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	527.7792236208916	2	527.782025	1053.5495	1.7529	0.00092516	-3.1666	-0.0016713	-1.4137	-0.00074612	527.780641733281	71.292	0.2851	71.292	71.098	71.383	0					14	8	2	0	0	0	0.39927	2	29654	29654;29702		20.454	9.6541	1	687020			43073	1134	21106	21196	49795;49796	49795					0.024863405860060084
YLFNSVVNV	9	Unmodified	_YLFNSVVNV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENSG00000166793|ENST00000300022|YPEL4	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	527.7825805544853	2	527.782025	1053.5495	1.5582	0.0008224	-0.1457	-7.6896E-05	1.4125	0.00074551	527.781688687332	70.754	0.31503	71.078	70.924	71.239	0.32359					18	9	3	0	0	0	0.24063	1	29610	29610		28.487	12.64	1	578310			43074	1134	21106	21196	49797	49797					0.024863405860060084
YLFNSVVNV	9	Unmodified	_YLFNSVVNV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENSG00000166793|ENST00000300022|YPEL4	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	528.3196899294853	2	527.782025	1053.5495	2.3754	0.0012537	-2.1559	-0.0011378	0.21954	0.00011587	527.7808741997676	69.622	0.49704	70.988	70.758	71.255	1.3657					33	15	3	0	0	0	0.060741	1	29241	29241		42.095	20.348	1	3134000			43075	1134	21106	21196	49798	49798					0.024863405860060084
YLFNSVVNV	9	Unmodified	_YLFNSVVNV_					0	0	0		nc|ENSG00000090238|P61236|YPEL3;ENSG00000090238|ENST00000398841|YPEL3;ENST00000477675.1_1_22:22055420-22058252:-|nuORF;ENSG00000175155|ENST00000312655|YPEL2;ENSG00000100027|ENST00000339468|YPEL1;ENSG00000166793|ENST00000300022|YPEL4	nc|ENSG00000090238|P61236|YPEL3	nc|ENSG00000090238|P61236|YPEL3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	527.7830688357353	2	527.782025	1053.5495	1.4379	0.00075892	-2.5349	-0.0013379	-1.0969	-0.00057895	527.7809685092401	69.066	0.39891	70.919	70.737	71.136	1.853					20	12	2	0	0	0	0.46905	1	29050	29050		16.942	7.5949	1	2103800			43076	1134	21106	21196	49799	49799					0.024863405860060084
YLFSLSHIL	9	Unmodified	_YLFSLSHIL_					0	0	0		ENST00000448093.5_2_6:30028682-30028808:-|nuORF	ENST00000448093.5_2_6:30028682-30028808:-|nuORF	ENST00000448093.5_2_6:30028682-30028808:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.3500854372978	2	546.808042	1091.60153	2.9944	0.0016373	-3.3222	-0.0018166	-0.32778	-0.00017923	546.8055856064539	60.59	0.27944	62.01	61.841	62.121	1.4196					15	8	2	0	0	0	0.11109	1	25360	25360		5.2307	0	1	784790			43077	6590	21107	21197	49800	49800					0.059395039997752974
YLFSQSYGF	9	Unmodified	_YLFSQSYGF_					0	0	0		tr|A0A7D6VYC6|A0A7D6VYC6_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_16280PE=4SV=1	tr|A0A7D6VYC6|A0A7D6VYC6_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_16280PE=4SV=1	tr|A0A7D6VYC6|A0A7D6VYC6_9CLOTHistidineproteinkinaseSaeSOS=ClostridiumintestinaleOX=36845GN=HZF06_16280PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	555.7667724490166	2	556.258382	1110.50221	2.8689	0.0015959	-2.4688	-0.0013733	0.40018	0.0002226	556.2564304688453	74.367	0.62917	76.163	75.929	76.558	1.7962					29	19	3	0	0	0	0.116	1	31324	31324		9.3474	4.5914	1	920760			43078	16999	21108	21198	49801	49801					-0.04861938684985034
YLGEEDYDPHR	11	Unmodified	_YLGEEDYDPHR_					0	0	0			REV__ENSG00000140521|ENST00000268124|POLG	REV__ENSG00000140521|ENST00000268124|POLG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	697.3052856326103	2	697.304581	1392.59461	2.8578	0.0019927	-1.6302	-0.0011367	1.2276	0.000856	697.3033642068842	86.355	0.62622	86.355	86.071	86.697	0					46	20	3	0	0	0	0.66268	3	35928	35928;35979;36028		19.362	6.3195	1	2516400	+		43079	10128	21109	21199	49802;49803;49804	49802					-0.08598505409440804
YLGEEDYDPHR	11	Unmodified	_YLGEEDYDPHR_					0	0	0			REV__ENSG00000140521|ENST00000268124|POLG	REV__ENSG00000140521|ENST00000268124|POLG	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	697.3055908083916	2	697.304581	1392.59461	2.5127	0.0017521	-0.47795	-0.00033328	2.0348	0.0014189	697.304145982311	85.691	0.49635	85.943	85.726	86.222	0.25227					33	15	3	0	0	0	0.77451	1	35824	35824		16.149	3.1066	1	1178200	+		43080	10128	21109	21199	49805	49805					-0.08598505409440804
YLGEEDYDPHR	11	Unmodified	_YLGEEDYDPHR_					0	0	0			REV__ENSG00000140521|ENST00000268124|POLG	REV__ENSG00000140521|ENST00000268124|POLG	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	697.3971435427666	2	697.304581	1392.59461	2.5127	0.0017521	-0.47795	-0.00033328	2.0348	0.0014189	697.304145982311	85.691	0.49635	85.943	85.726	86.222	0.25227					33	15	3	0	0	0	0.14606	1	35742	35742		3.2813	1.6287	1	1178200	+		43081	10128	21109	21199	49806	49806					-0.08598505409440804
YLGEEDYDPHR	11	Unmodified	_YLGEEDYDPHR_					0	0	0			REV__ENSG00000140521|ENST00000268124|POLG	REV__ENSG00000140521|ENST00000268124|POLG	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	697.304581	1392.59461	2.8578	0.0019927	-1.6302	-0.0011367	1.2276	0.000856	697.3033642068842	86.355	0.62622	86.355	86.071	86.697	0	0	0	NaN	19.362	46	20	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2516400	+		43082	10128	21109	21199							-0.08598505409440804
YLGEKDGYFAI	11	Unmodified	_YLGEKDGYFAI_					0	0	0		tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	638.3165771365166	2	638.316428	1274.6183	1.165	0.00074365	0.18419	0.00011757	1.3492	0.00086122	638.3164028101829	54.93	0.40675	56.335	56.121	56.528	1.4048					48	13	5	0	0	0	0.21817	1	22940	22940		38.615	6.5773	1	25832000			43083	17153	21110	21200	49807	49807					-0.00802039904965568
YLGEKDGYFAI	11	Unmodified	_YLGEKDGYFAI_					0	0	0		tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	tr|A0A7D6ZVJ3|A0A7D6ZVJ3_9CLOTBypassofforesporeCC-terminaldomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15215PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	638.3165161013603	2	638.316428	1274.6183	1.5438	0.00098546	-0.18553	-0.00011843	1.3583	0.00086703	638.3162291820167	54.512	0.44493	56.481	56.223	56.668	1.9684					43	14	4	0	0	0	0.21817	1	22779	22779		38.615	4.213	1	23715000			43084	17153	21110	21200	49808	49808					-0.00802039904965568
YLGGHGFN	8	Unmodified	_YLGGHGFN_					0	0	0		nc|ENSG00000148498|Q8TEW0-5|PARD3;nc|ENSG00000148498|Q8TEW0-3|PARD3;nc|ENSG00000148498|Q8TEW0-7|PARD3;nc|ENSG00000148498|Q8TEW0-6|PARD3;nc|ENSG00000148498|Q8TEW0-4|PARD3;nc|ENSG00000148498|Q8TEW0-11|PARD3;ENSG00000148498|ENST00000374788|PARD3;nc|ENSG00000148498|Q8TEW0|PARD3	nc|ENSG00000148498|Q8TEW0-5|PARD3	nc|ENSG00000148498|Q8TEW0-5|PARD3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	432.7050048708916	2	432.703577	863.392602	1.3171	0.00056991	2.207	0.00095496	3.5241	0.0015249	432.7041857097735	68.962	0.42151	70.815	70.588	71.009	1.853					34	13	3	0	0	0	0.88958	1	28903	28903		2.8892	0.58649	1	7162600			43085	3215	21111	21201	49809	49809					-0.04455899513664008
YLGQEISF	8	Unmodified	_YLGQEISF_					0	0	0			REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	956.4689208865166	1	956.472374	955.465098	-0.14493	-0.00013863	-0.90962	-0.00087002	-1.0546	-0.0010086	956.4718453084536	51.198	0.3362	52.592	52.437	52.773	1.3938					14	10	2	0	0	0	0.66196	1	21441	21441		34.102	3.8776	1	687100	+		43086	14874	21112	21202	49810	49810					-0.014416102307677647
YLGQEISF	8	Unmodified	_YLGQEISF_					0	0	0			REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	956.472374	955.465098	-0.14493	-0.00013863	-0.90962	-0.00087002	-1.0546	-0.0010086	956.4718453084536	51.198	0.3362	52.592	52.437	52.773	1.3938	-0.014757	-0.00029932	NaN	34.102	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	687100	+		43087	14874	21112	21202							-0.014416102307677647
YLGQEISF	8	Unmodified	_YLGQEISF_					0	0	0			REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	REV__tr|A0A553SIX9|A0A553SIX9_NIACIYitTfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15705PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	956.472374	955.465098	0.59505	0.00056915	-0.19564	-0.00018712	0.39942	0.00038203	956.4728534898067	50.646	0.30497	52.621	52.483	52.788	1.9753	0.014757	0.00038358	NaN	34.102	13	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	828480	+		43088	14874	21112	21202							-0.014416102307677647
YLGQVAIL	8	Unmodified	_YLGQVAIL_					0	0	0		ENST00000552316.1_1_12:120935833-120936010:+|nuORF;ENSG00000264364|ENST00000579991|DYNLL2;ENSG00000088986|ENST00000242577|DYNLL1	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	876.5218383669853	1	876.518931	875.511654	1.7223	0.0015096	2.0673	0.0018121	3.7896	0.0033217	876.5196661927093	65.692	0.22755	65.692	65.546	65.774	0					9	6	2	0	0	0	0.74212	1	27379	27379		26.341	1.6674	1	368040			43089	1114	21113	21203	49811	49811					0.06891874391192232
YLGQVAIL	8	Unmodified	_YLGQVAIL_					0	0	0		ENST00000552316.1_1_12:120935833-120936010:+|nuORF;ENSG00000264364|ENST00000579991|DYNLL2;ENSG00000088986|ENST00000242577|DYNLL1	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	876.518931	875.511654	1.9684	0.0017253	0.42767	0.00037486	2.396	0.0021002	876.5195237165304	65.156	0.28745	65.483	65.29	65.578	0.32688	-0.036926	-0.00084656	NaN	26.341	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	382980			43090	1114	21113	21203							0.06891874391192232
YLGQVAIL	8	Unmodified	_YLGQVAIL_					0	0	0		ENST00000552316.1_1_12:120935833-120936010:+|nuORF;ENSG00000264364|ENST00000579991|DYNLL2;ENSG00000088986|ENST00000242577|DYNLL1	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	ENST00000552316.1_1_12:120935833-120936010:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		1	876.518931	875.511654	2.3249	0.0020378	1.0142	0.00088893	3.339	0.0029267	876.5206712578092	63.978	0.25728	65.385	65.24	65.497	1.4071	-0.13507	-0.00033249	NaN	26.341	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	807940			43091	1114	21113	21203							0.06891874391192232
YLGQVTTI	8	Unmodified	_YLGQVTTI_					0	0	0		ENSG00000126261|ENST00000246548|UBA2;nc|ENSG00000126261|Q9UBT2-2|UBA2;UBA2-GPI|1|fusion	ENSG00000126261|ENST00000246548|UBA2	ENSG00000126261|ENST00000246548|UBA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	894.4930297732353	1	894.49311	893.485833	1.9806	0.0017717	-0.58293	-0.00052143	1.3977	0.0012502	894.492552286425	43.986	0.28011	45.34	45.222	45.502	1.3536					13	8	2	0	0	0	0.45419	1	18446	18446		50.855	3.9342	1	934810			43092	2304	21114	21204	49812	49812					0.03482980148908155
YLGQVTTI	8	Unmodified	_YLGQVTTI_					0	0	0		ENSG00000126261|ENST00000246548|UBA2;nc|ENSG00000126261|Q9UBT2-2|UBA2;UBA2-GPI|1|fusion	ENSG00000126261|ENST00000246548|UBA2	ENSG00000126261|ENST00000246548|UBA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	894.4882079958916	1	894.49311	893.485833	1.8991	0.0016987	-2.3741	-0.0021236	-0.47506	-0.00042494	894.4899318951285	43.4	0.22977	45.344	45.225	45.455	1.9438					12	7	2	0	0	0	0.51105	2	18233	18185;18233		46.921	0	1	1274000			43093	2304	21114	21204	49813;49814	49814					0.03482980148908155
YLGTTRRRK	9	Unmodified	_YLGTTRRRK_					0	0	0			REV__tr|A0A553SGI4|A0A553SGI4_NIACIVOCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10940PE=4SV=1	REV__tr|A0A553SGI4|A0A553SGI4_NIACIVOCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10940PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	575.8438598513603	2	575.843813	1149.67307	1.5956	0.00091882	-0.40233	-0.00023168	1.1933	0.00068714	575.8432886943534	72.692	1.924	72.692	71.509	73.433	0					120	60	3	0	0	0	0.82604	1	30299	30299		2.3027	2.3027	1	2170400	+		43094	14750	21115	21205	49815	49815					0.10422436476983421
YLGTTRRRK	9	Unmodified	_YLGTTRRRK_					0	0	0			REV__tr|A0A553SGI4|A0A553SGI4_NIACIVOCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10940PE=4SV=1	REV__tr|A0A553SGI4|A0A553SGI4_NIACIVOCfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10940PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	575.8440429568291	2	575.843813	1149.67307	1.8258	0.0010514	-0.22419	-0.0001291	1.6016	0.00092228	575.8433024794798	72.559	1.7134	72.884	71.721	73.434	0.32494					126	53	3	0	0	0	0.82604	1	30205	30205		2.3027	0	1	2554000	+		43095	14750	21115	21205	49816	49816					0.10422436476983421
YLGYLEQLLR	10	Unmodified	_YLGYLEQLLR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	634.3569824099541	2	634.355888	1266.69722	2.1519	0.0013651	-0.97066	-0.00061574	1.1813	0.00074934	634.3553383796083	75.552	0.91541	75.552	75.311	76.226	0					81	28	4	0	0	0	0.062288	5	31521	31395;31440;31479;31521;31723		155.03	106.68	1	10434000		+	43096	335	21116	21206	49817;49818;49819;49820;49821	49820					0.07454232119994231
YLGYLEQLLR	10	Unmodified	_YLGYLEQLLR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	634.3574096560478	2	634.355888	1266.69722	2.447	0.0015523	-0.3329	-0.00021118	2.1141	0.0013411	634.355830230837	75.053	0.81563	75.378	75.143	75.959	0.32464					66	25	4	0	0	0	0.049285	4	31439	31337;31385;31439;31493		96.367	62.311	1	5338200		+	43097	335	21116	21206	49822;49823;49824;49825	49824					0.07454232119994231
YLGYLEQLLR	10	Unmodified	_YLGYLEQLLR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3560058474541	2	634.355888	1266.69722	3.1417	0.001993	-0.27158	-0.00017228	2.8702	0.0018207	634.3559467978442	74.013	0.46581	75.331	75.125	75.591	1.318					33	14	3	0	0	0	0.12602	2	31047	31047;31093		59.368	37.831	1	2766700		+	43098	335	21116	21206	49826;49827	49826					0.07454232119994231
YLGYLEQLLR	10	Unmodified	_YLGYLEQLLR_					0	0	0		CON__P02662	CON__P02662	CON__P02662	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3575317263603	2	634.355888	1266.69722	2.2956	0.0014563	0.019857	1.2596E-05	2.3155	0.0014689	634.3561753907474	73.471	0.46674	75.267	75.069	75.536	1.7962					30	14	3	0	0	0	0.078293	2	30816	30816;30869		67.838	46.301	1	1762800		+	43099	335	21116	21206	49828;49829	49828					0.07454232119994231
YLHCMWHI	8	Unmodified	_YLHCMWHI_					0	0	0		nc|ENSG00000177076|Q5QJU3-2|ACER2;ENSG00000177076|ENST00000340967|ACER2	nc|ENSG00000177076|Q5QJU3-2|ACER2	nc|ENSG00000177076|Q5QJU3-2|ACER2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	552.2166625857353	2	551.75169	1101.48883	3.0253	0.0016692	0.24817	0.00013693	3.2735	0.0018062	551.7515941424051	60.91	0.35188	62.33	62.121	62.473	1.4196					12	10	2	0	0	0	2.3239	1	25503	25503		0.79363	0	1	551800			43100	4432	21117	21207	49830	49830					-0.05785791269590845
YLHDFLKYL	9	Unmodified	_YLHDFLKYL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000447135.2_1_4:174537089-174537971:-|nuORF	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	404.5536071658134	3	404.553492	1210.63865	2.7592	0.0011163	-0.70011	-0.00028323	2.0591	0.00083303	404.5531814753782	64.5	1.3311	65.907	65.65	66.981	1.4071					63	42	2	0	0	0	0.093486	3	27011	27011;27055;27099		51.488	31.073	1	5413500			43101	2196	21118	21208	49831;49832;49833	49831					0.041751755455152306
YLHDFLKYL	9	Unmodified	_YLHDFLKYL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000447135.2_1_4:174537089-174537971:-|nuORF	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	606.3262817263603	2	606.326599	1210.63865	3.1194	0.0018914	-0.65868	-0.00039937	2.4607	0.001492	606.3269161569925	64.472	0.55312	65.879	65.71	66.263	1.4071					37	17	3	0	0	0	0.11077	2	27076	27076;27127		41.84	17.166	1	1112000			43102	2196	21118	21208	49834;49835	49834					0.041751755455152306
YLHDFLKYL	9	Unmodified	_YLHDFLKYL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000447135.2_1_4:174537089-174537971:-|nuORF	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	404.5543090701103	3	404.553492	1210.63865	2.6472	0.001071	-0.41251	-0.00016688	2.2347	0.00090407	404.5532781692677	63.955	1.1582	65.883	65.582	66.74	1.928					91	36	4	0	0	0	0.093486	3	26833	26787;26833;26888		51.488	27.826	1	4893300			43103	2196	21118	21208	49836;49837;49838	49837					0.041751755455152306
YLHDFLKYL	9	Unmodified	_YLHDFLKYL_					0	0	0		nc|ENSG00000185787|Q9UBU8-3|MORF4L1;ENSG00000123562|ENST00000441076|MORF4L2;ENSG00000185787|ENST00000426013|MORF4L1;nc|ENSG00000185787|Q9UBU8|MORF4L1;ENST00000447135.2_1_4:174537089-174537971:-|nuORF	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	nc|ENSG00000185787|Q9UBU8-3|MORF4L1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	606.326599	1210.63865	2.8889	0.0017516	-1.531	-0.00092829	1.3579	0.00082334	606.3261902639365	63.895	0.58908	65.823	65.613	66.202	1.928	-0.027836	-0.00054997	NaN	41.84	33	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1179800			43104	2196	21118	21208							0.041751755455152306
YLHDQFWSYW	10	Unmodified	_YLHDQFWSYW_					0	0	0		ENST00000570265.5_1_15:36871929-37039277:+|nuORF;ENSG00000186073|ENST00000566621|CDIN1;ENST00000566677.1_1_15:37001404-37100651:+|nuORF;nc|ENSG00000186073|Q9Y2V0-2|CDIN1	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	ENST00000570265.5_1_15:36871929-37039277:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	722.8193847537041	2	722.81967	1443.62479	-0.27876	-0.00020149	-2.5092	-0.0018137	-2.7879	-0.0020152	722.8181841498207	18.221	0.23438	19.669	19.524	19.758	1.448					15	7	3	0	0	0	0.81324	1	7565	7565		10.824	0	1	703000			43105	7387	21119	21209	49839	49839					-0.07928101953575606
YLHIIKKKQA	10	Unmodified	_YLHIIKKKQA_					0	0	0			REV__nc|ENSG00000122432|Q5VX52|SPATA1	REV__nc|ENSG00000122432|Q5VX52|SPATA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	414.5983154177666	3	414.595802	1240.76558	3.3159	0.0013748	2.785	0.0011547	6.101	0.0025294	414.596868345118	91.325	0.5256	92.691	92.406	92.932	1.366					49	16	4	0	0	0	0.89803	1	38490	38490		0.69767	0.07084	1	9602500	+		43106	14419	21120	21210	49840	49840					0.1548252149052587
YLHIPPPQL	9	Unmodified	_YLHIPPPQL_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST;chr7:130487006-130495368|411|17.34|0.83|4.39|+|ENST00000399874|MEST,MEST;chr7:130494551-130495368|401|12.07|0.73|4.06|+|ENST00000458161|MEST,MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.3095580935478	2	539.30821	1076.60187	1.8258	0.00098465	0.05128	2.7656E-05	1.877	0.0010123	539.3081751413368	52.455	0.7246	52.455	52.161	52.885	0					35	22	2	0	0	0	0.20838	2	21900	21795;21900		32.117	18.609	1	474370			43107	1570	21121	21211	49841;49842	49842					0.066629237196139
YLHIPPPQL	9	Unmodified	_YLHIPPPQL_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST;chr7:130487006-130495368|411|17.34|0.83|4.39|+|ENST00000399874|MEST,MEST;chr7:130494551-130495368|401|12.07|0.73|4.06|+|ENST00000458161|MEST,MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MSMS	GG20161007_CRH_Patient100_A02_02	2	539.3101074099541	2	539.30821	1076.60187	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.756	1	52.082	51.582	52.582	0.32553								0	0	0	0.081484	1	21680	21680		38.151	20.016	1				43108	1570	21121	21211	49843	49843					0.066629237196139
YLHIPPPQL	9	Unmodified	_YLHIPPPQL_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST;chr7:130487006-130495368|411|17.34|0.83|4.39|+|ENST00000399874|MEST,MEST;chr7:130494551-130495368|401|12.07|0.73|4.06|+|ENST00000458161|MEST,MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.3115722537041	2	539.30821	1076.60187	2.1092	0.0011375	1.5198	0.00081963	3.629	0.0019571	539.3086994651169	50.607	0.97743	52	51.551	52.528	1.3938					65	31	3	0	0	0	0.010702	5	21188	21086;21141;21188;21243;21388		106.85	50.304	1	3299100			43109	1570	21121	21211	49844;49845;49846;49847;49848	49846					0.066629237196139
YLHIPPPQL	9	Unmodified	_YLHIPPPQL_					0	0	0		nc|ENSG00000106484|Q5EB52-2|MEST;ENSG00000106484|ENST00000223215|MEST;nc|ENSG00000106484|Q5EB52-3|MEST;chr7:130487006-130495368|411|17.34|0.83|4.39|+|ENST00000399874|MEST,MEST;chr7:130494551-130495368|401|12.07|0.73|4.06|+|ENST00000458161|MEST,MEST	nc|ENSG00000106484|Q5EB52-2|MEST	nc|ENSG00000106484|Q5EB52-2|MEST	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3095580935478	2	539.30821	1076.60187	1.7194	0.00092727	1.9923	0.0010744	3.7116	0.0020017	539.3093871221948	50.026	0.73697	52.003	51.601	52.338	1.9772					61	23	3	0	0	0	0.02596	5	20914	20862;20914;20966;21019;21089		93.883	50.915	1	3146700			43110	1570	21121	21211	49849;49850;49851;49852;49853	49850					0.066629237196139
YLHIYKMR	8	Unmodified	_YLHIYKMR_					0	0	0		Tigger4b_dup2156|chr16:29442250-29442588:-|1.197703121402909|0.4872832370944458|1.3|428.0|13|1|anti-sense	Tigger4b_dup2156|chr16:29442250-29442588:-|1.197703121402909|0.4872832370944458|1.3|428.0|13|1|anti-sense	Tigger4b_dup2156|chr16:29442250-29442588:-|1.197703121402909|0.4872832370944458|1.3|428.0|13|1|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	562.3102294802666	2	562.307687	1122.60082	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.403	1	58.403	57.903	58.903	0								0	0	0	1.0178	1	24362	24362		2.5775	0	1				43111	16026	21122	21212	49854	49854					0.04442386079062999
YLHRNKHTFLQ	11	Unmodified	_YLHRNKHTFLQ_					0	0	0		ENST00000520579.5_1_5:149495328-149514444:-|nuORF;ENSG00000113721|ENST00000261799|PDGFRB	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	ENST00000520579.5_1_5:149495328-149514444:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	729.3955566287041	2	728.894035	1455.77352	0.9295	0.00067751	-1.2169	-0.00088699	-0.2874	-0.00020949	728.8929137080564	54.994	0.3172	56.398	56.211	56.528	1.4048					25	10	3	0	0	0	0.90941	1	23032	23032		11.495	0	1	2939200			43112	1839	21123	21213	49855	49855					0.06386048739977923
YLHTTTTFT	9	Unmodified	_YLHTTTTFT_					0	0	0		nc|ENSG00000108846|O15438-5|ABCC3;ENST00000502426.5_1_17:48736553-48755440:+|nuORF;nc|ENSG00000108846|O15438-2|ABCC3;ENSG00000108846|ENST00000285238|ABCC3;nc|ENSG00000108846|O15438-4|ABCC3	nc|ENSG00000108846|O15438-5|ABCC3	nc|ENSG00000108846|O15438-5|ABCC3	MSMS	GG20161007_CRH_Patient100_W632_01	3	542.7731201052666	2	542.769114	1083.52368	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.91	1	75.228	74.728	75.728	1.318								0	0	0	0.16797	1	31015	31015		28.487	3.0875	1				43113	1651	21124	21214	49856	49856					-0.014745536562941197
YLIELIDRV	9	Unmodified	_YLIELIDRV_					0	0	0		nc|ENSG00000151694|P78536-2|ADAM17;ENSG00000151694|ENST00000310823|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	567.3350707888603	2	567.331882	1132.64921	1.3238	0.00075101	0.55063	0.00031239	1.8744	0.0010634	567.332543221086	71.211	0.63255	71.211	71.035	71.668	0					35	19	2	0	0	0	0.13623	2	29636	29636;29688		40.239	11.784	1	2119600			43114	3297	21125	21215	49857;49858	49857					0.08819158199935373
YLIELIDRV	9	Unmodified	_YLIELIDRV_					0	0	0		nc|ENSG00000151694|P78536-2|ADAM17;ENSG00000151694|ENST00000310823|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	567.3327514529228	2	567.331882	1132.64921	1.242	0.00070465	1.303	0.00073921	2.545	0.0014439	567.3331653771287	70.554	0.4024	70.877	70.708	71.111	0.32224					25	12	3	0	0	0	0.1052	1	29527	29527		47.594	16.958	1	2064500			43115	3297	21125	21215	49859	49859					0.08819158199935373
YLIELIDRV	9	Unmodified	_YLIELIDRV_					0	0	0		nc|ENSG00000151694|P78536-2|ADAM17;ENSG00000151694|ENST00000310823|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3325683474541	2	567.331882	1132.64921	2.2454	0.0012739	-0.37369	-0.00021201	1.8717	0.0010619	567.3318435120681	69.436	0.38875	70.801	70.645	71.033	1.3657					23	12	3	0	0	0	0.036104	2	29128	29128;29176		79.596	17.024	1	7923600			43116	3297	21125	21215	49860;49861	49860					0.08819158199935373
YLIELIDRV	9	Unmodified	_YLIELIDRV_					0	0	0		nc|ENSG00000151694|P78536-2|ADAM17;ENSG00000151694|ENST00000310823|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	nc|ENSG00000151694|P78536-2|ADAM17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3344604372978	2	567.331882	1132.64921	1.3626	0.00077305	-0.02345	-1.3304E-05	1.3392	0.00075975	567.3322224609328	68.842	0.32956	70.695	70.558	70.887	1.853					28	10	3	0	0	0	0.081597	2	28878	28878;28928		55.503	9.8031	1	6938700			43117	3297	21125	21215	49862;49863	49862					0.08819158199935373
YLIEPDVEL	9	Unmodified	_YLIEPDVEL_					0	0	0		ENST00000486832.1_1_3:137958292-137964088:+|nuORF;nc|ENSG00000114098|Q8IUR7-6|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-2|ARMC8;ENSG00000114098|ENST00000469044|ARMC8	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7877075076103	2	545.786973	1089.55939	2.8509	0.001556	-0.93734	-0.00051159	1.9135	0.0010444	545.7865614180156	70.544	0.32193	71.898	71.648	71.97	1.3536					14	9	2	0	0	0	0.24063	1	29598	29598		28.487	11.4	1	1989900			43118	1849	21126	21216	49864	49864					0.01819483800704802
YLIEPDVEL	9	Unmodified	_YLIEPDVEL_					0	0	0		ENST00000486832.1_1_3:137958292-137964088:+|nuORF;nc|ENSG00000114098|Q8IUR7-6|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-2|ARMC8;ENSG00000114098|ENST00000469044|ARMC8	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.7874633669853	2	545.786973	1089.55939	2.4417	0.0013326	-1.7914	-0.0009777	0.6503	0.00035493	545.7856681265538	70.06	0.35435	71.898	71.656	72.01	1.8378					14	10	2	0	0	0	0.1735	1	29375	29375		36.044	7.5574	1	2383600			43119	1849	21126	21216	49865	49865					0.01819483800704802
YLIEPDVEL	9	Unmodified	_YLIEPDVEL_					0	0	0		ENST00000486832.1_1_3:137958292-137964088:+|nuORF;nc|ENSG00000114098|Q8IUR7-6|ARMC8;ENST00000460495.5_1_3:137956301-138014731:+|nuORF;nc|ENSG00000114098|Q8IUR7-3|ARMC8;nc|ENSG00000114098|Q8IUR7-7|ARMC8;nc|ENSG00000114098|Q8IUR7-2|ARMC8;ENSG00000114098|ENST00000469044|ARMC8	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	ENST00000486832.1_1_3:137958292-137964088:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	545.786973	1089.55939	1.6708	0.00091192	-0.51615	-0.00028171	1.1547	0.00063022	545.7873436303106	71.588	0.25516	71.911	71.751	72.006	0.32359	0.008891	0.00075169	NaN	36.044	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	200190			43120	1849	21126	21216							0.01819483800704802
YLIGQHVTAAL	11	Unmodified	_YLIGQHVTAAL_					0	0	0		nc|ENSG00000135108|O94952|FBXO21;ENSG00000135108|ENST00000622495|FBXO21	nc|ENSG00000135108|O94952|FBXO21	nc|ENSG00000135108|O94952|FBXO21	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	593.3370239138603	2	593.334956	1184.65536	2.2427	0.0013307	-1.9958	-0.0011842	0.24694	0.00014652	593.3336785557799	45.426	0.29118	46.791	46.596	46.887	1.3653					12	8	2	0	0	0	0.46674	1	19036	19036		24.991	4.5373	1	665590			43121	2648	21127	21217	49866	49866					0.07041676431481392
YLIIKKDL	8	Unmodified	_YLIIKKDL_					0	0	0			REV__tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	REV__tr|A0A553SIT4|A0A553SIT4_NIACICDP-glycerolglycerophosphotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_15500PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3229858279228	2	503.320786	1004.62702	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.57	1	104.73	104.23	105.23	0.16055								0	0	0	1.0178	1	44334	44334		0.6015	0	1		+		43122	14866	21128	21218	49867	49867					0.12488978522173966
YLIKDIRFL	9	Unmodified	_YLIKDIRFL_					0	0	0		ENST00000466614.1_1_22:30983271-30987820:-|nuORF;nc|ENSG00000100029|O00541-2|PES1;ENSG00000100029|ENST00000354694|PES1	ENST00000466614.1_1_22:30983271-30987820:-|nuORF	ENST00000466614.1_1_22:30983271-30987820:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	394.2412597537041	3	394.241137	1179.70158	1.5901	0.00062689	0.79273	0.00031253	2.3828	0.00093941	394.2406340237201	39.008	0.50256	40.304	40.069	40.572	1.2961					37	15	4	0	0	0	0.42305	1	16411	16411		18.373	1.2602	1	32440000			43123	1229	21129	21219	49868	49868					0.11891741333556638
YLIKIWVVF	9	Unmodified	_YLIKIWVVF_					0	0	0			REV__ENST00000540555.1_1_11:18503050-18505548:-|nuORF	REV__ENST00000540555.1_1_11:18503050-18505548:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.2413818240166	3	394.242477	1179.7056	0.93801	0.0003698	-2.9827	-0.0011759	-2.0447	-0.00080611	394.24093285839876	38.42	0.82745	40.257	40.02	40.848	1.8366					59	25	4	0	0	0	0.20838	1	16080	16080		22.736	2.1553	1	25004000	+		43124	13778	21130	21220	49869	49869					0.12293830827275087
YLILGWIML	9	Unmodified	_YLILGWIML_					0	0	0			REV__tr|A0A553SHG8|A0A553SHG8_NIACIDUF1648domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12865PE=4SV=1	REV__tr|A0A553SHG8|A0A553SHG8_NIACIDUF1648domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_12865PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.3231689333916	2	561.325014	1120.63547	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.722	1	36.997	36.497	37.497	1.2746								0	0	0	0.42693	1	14996	14996		5.2307	0.90143	1		+		43125	14796	21131	21221	49870	49870					0.07998209167158166
YLINGFLNFN	10	Unmodified	_YLINGFLNFN_					0	0	0		nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9;ENSG00000086848|ENST00000616540|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.8162719607353	2	607.813856	1213.61316	5.6593	0.0034398	-0.057738	-3.5094E-05	5.6016	0.0034047	607.8135944307788	89.006	0.41908	90.062	89.82	90.239	1.0562					35	12	4	0	0	0	0.51515	3	37545	37468;37507;37545		26.884	8.7373	1	6057500			43126	1078	21132	21222	49871;49872;49873	49873					0.014897010231152308
YLINGFLNFN	10	Unmodified	_YLINGFLNFN_					0	0	0		nc|ENSG00000086848|Q9H6U8-2|ALG9;nc|ENSG00000086848|Q9H6U8-4|ALG9;nc|ENSG00000086848|Q9H6U8|ALG9;ENSG00000086848|ENST00000616540|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	nc|ENSG00000086848|Q9H6U8-2|ALG9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8166381716728	2	607.813856	1213.61316	4.6754	0.0028418	1.1483	0.00069796	5.8237	0.0035397	607.8144149841448	88.593	0.38677	90.04	89.856	90.243	1.4467					22	11	3	0	0	0	0.51515	2	37351	37310;37351		26.884	8.7373	1	4522000			43127	1078	21132	21222	49874;49875	49875					0.014897010231152308
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5844604372978	3	382.585015	1144.73321	0.17715	6.7777E-05	0.094941	3.6323E-05	0.2721	0.0001041	382.5849492612679	52.313	1.722	53.709	53.346	55.068	1.3966					136	61	3	0	0	0	0.1388	4	22040	21782;21940;22040;22134		39.95	0	1	6499600			43128	6044	21133	21223	49876;49877;49878;49879	49878					0.16663734087524062
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5858032107353	3	382.585015	1144.73321	0.65623	0.00025106	0.71496	0.00027353	1.3712	0.00052459	382.58513795789213	55.197	0.51586	56.607	56.422	56.937	1.4099					24	17	2	0	0	0	0.40005	2	23083	23083;23241		20.415	0	1	1541800			43129	6044	21133	21223	49880;49881	49880					0.16663734087524062
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5854064822197	3	382.585015	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.188	1	55.593	55.093	56.093	1.4048								0	0	0	0.33422	1	22682	22682		15.248	0	1				43130	6044	21133	21223	49882	49882					0.16663734087524062
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	382.5860168337822	3	382.585015	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.429	1	55.833	55.333	56.333	1.4048								0	0	0	0.37238	1	22781	22781		11.495	0	1				43131	6044	21133	21223	49883	49883					0.16663734087524062
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	382.5848571658134	3	382.585015	1144.73321	0.78814	0.00030153	-0.79078	-0.00030254	-0.0026466	-1.0126E-06	382.58460978719654	51.736	1.4906	53.709	53.245	54.736	1.9722					124	48	4	0	0	0	0.10473	3	21808	21706;21756;21808		47.749	0	1	6610100			43132	6044	21133	21223	49884;49885;49886	49886					0.16663734087524062
YLINLKRLL	9	Unmodified	_YLINLKRLL_					0	0	0		ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	ENST00000361908.7_1_3:193374935-193376676:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	382.5843383669853	3	382.585015	1144.73321	NaN	NaN	NaN	NaN	NaN	NaN	NaN	52.729	1	54.702	54.202	55.202	1.9722								0	0	0	0.072403	1	22089	22089		39.95	0	1				43133	6044	21133	21223	49887	49887					0.16663734087524062
YLIPLLERL	9	Unmodified	_YLIPLLERL_					0	0	0		DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant;ENSG00000110367|ENST00000534980|DDX6	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3534423708916	2	565.352617	1128.69068	2.0389	0.0011527	0.83957	0.00047466	2.8785	0.0016274	565.353083799911	84.436	0.59512	84.436	84.058	84.653	0					40	18	3	0	0	0	0.14534	1	35170	35170		49.554	13.088	1	3490900			43134	401	21134	21224	49888	49888					0.13148338959263128
YLIPLLERL	9	Unmodified	_YLIPLLERL_					0	0	0		DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant;ENSG00000110367|ENST00000534980|DDX6	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3552734255791	2	565.352617	1128.69068	3.0643	0.0017324	1.4788	0.00083607	4.5431	0.0025685	565.3537190921885	82.81	0.55573	84.022	83.731	84.286	1.2125					60	17	5	0	0	0	0.047853	2	34776	34726;34776		85.642	18.039	1	9862100			43135	401	21134	21224	49889;49890	49890					0.13148338959263128
YLIPLLERL	9	Unmodified	_YLIPLLERL_					0	0	0		DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant;ENSG00000110367|ENST00000534980|DDX6	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3550903201103	2	565.352617	1128.69068	3.2918	0.001861	1.2253	0.00069272	4.5171	0.0025537	565.3535613762366	82.3	0.77951	83.97	83.607	84.386	1.67					56	24	4	0	0	0	0.047853	2	34528	34528;34566		85.642	25.568	1	9118300			43136	401	21134	21224	49891;49892	49891					0.13148338959263128
YLIPLLERL	9	Unmodified	_YLIPLLERL_					0	0	0		DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant;ENSG00000110367|ENST00000534980|DDX6	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	DDX6|p.T310Yfs*16|1|0.04|ENSG00000110367|chr11:118758840-118758841|-/GACTTAAACTCTTTGCCACACTGTAC|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	565.352617	1128.69068	2.3056	0.0013035	-0.58934	-0.00033318	1.7163	0.00097031	565.3525645593256	83.808	0.51862	84.078	83.739	84.257	0.27029	-0.048187	-0.0015059	NaN	85.642	29	16	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3631800			43137	401	21134	21224							0.13148338959263128
YLIPNGKVQI	10	Unmodified	_YLIPNGKVQI_					0	0	0		tr|A0A7D6ZTM7|A0A7D6ZTM7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20840PE=4SV=1	tr|A0A7D6ZTM7|A0A7D6ZTM7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20840PE=4SV=1	tr|A0A7D6ZTM7|A0A7D6ZTM7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_20840PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	572.8428832888603	2	572.839874	1143.66519	1.8179	0.0010414	-0.17103	-9.797E-05	1.6469	0.00094341	572.8405945980991	67.292	0.33495	68.674	68.519	68.854	1.3815					19	10	2	0	0	0	0.51515	1	28229	28229		26.884	1.8927	1	1783500			43138	17143	21135	21225	49893	49893					0.09910864436869815
YLITLLEHL	9	Unmodified	_YLITLLEHL_					0	0	0		ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1;ENSG00000169679|ENST00000302759|BUB1	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.8330566287041	2	557.828975	1113.6434	3.9687	0.0022139	0.20954	0.00011689	4.1782	0.0023307	557.8293062710713	82.193	0.28296	83.406	83.255	83.537	1.2125					14	8	2	0	0	0	0.076627	1	34526	34526		57.471	23.369	1	968440			43139	4104	21136	21226	49894	49894					0.09112059688277441
YLITLLEHL	9	Unmodified	_YLITLLEHL_					0	0	0		ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1;ENSG00000169679|ENST00000302759|BUB1	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.8328735232353	2	557.828975	1113.6434	3.9799	0.0022201	-1.3381	-0.00074644	2.6418	0.0014737	557.8285874222544	81.67	0.31221	83.366	83.195	83.508	1.6959					14	9	2	0	0	0	0.033521	1	34288	34288		81.864	28.288	1	819360			43140	4104	21136	21226	49895	49895					0.09112059688277441
YLITLLEHL	9	Unmodified	_YLITLLEHL_					0	0	0		ENST00000465029.5_1_2:111419157-111435602:-|nuORF;nc|ENSG00000169679|O43683-2|BUB1;nc|ENSG00000169679|O43683-3|BUB1;ENSG00000169679|ENST00000302759|BUB1	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	ENST00000465029.5_1_2:111419157-111435602:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	557.828975	1113.6434	2.2529	0.0012567	0.27672	0.00015436	2.5296	0.0014111	557.829023318429	83.145	0.15534	83.415	83.368	83.523	0.27029	0.019828	0.00032513	NaN	81.864	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346370			43141	4104	21136	21226							0.09112059688277441
YLKDFFSNV	9	Unmodified	_YLKDFFSNV_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	566.7886840701103	2	566.787307	1131.56006	1.5967	0.00090501	1.9879	0.0011267	3.5847	0.0020317	566.7887007777758	57.923	0.28935	57.923	57.785	58.074	0					10	8	2	0	0	0	0.44512	1	24183	24183		18.146	11.423	1	335840			43142	1594	21137	21227	49896	49896					-0.0004567675957787287
YLKDFFSNV	9	Unmodified	_YLKDFFSNV_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	566.7897827029228	2	566.787307	1131.56006	2.2274	0.0012625	0.70228	0.00039804	2.9297	0.0016605	566.7881391527379	57.483	0.21389	57.806	57.673	57.887	0.32298					9	6	2	0	0	0	0.54523	1	24112	24112		13.508	3.434	1	562800			43143	1594	21137	21227	49897	49897					-0.0004567675957787287
YLKDFFSNV	9	Unmodified	_YLKDFFSNV_					0	0	0		nc|ENSG00000107201|O95786-2|RIGI;ENSG00000107201|ENST00000379883|RIGI	nc|ENSG00000107201|O95786-2|RIGI	nc|ENSG00000107201|O95786-2|RIGI	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	566.787307	1131.56006	0.89653	0.00050814	2.2151	0.0012555	3.1116	0.0017636	566.7885554942493	55.847	0.092117	57.816	57.749	57.841	1.9684	-0.03287	0.0007732	NaN	18.146	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467440			43144	1594	21137	21227							-0.0004567675957787287
YLKEFIHIL	9	Unmodified	_YLKEFIHIL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10;ENST00000556748.5_1_14:58666901-58681958:+|nuORF;ENST00000556312.5_1_14:58666935-58675849:+|nuORF	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	392.5649902224541	3	392.56562	1174.67503	1.2252	0.00048099	-0.61192	-0.00024022	0.61332	0.00024077	392.5653296452787	56.907	0.57435	58.322	58.093	58.667	1.4145					44	18	3	0	0	0	0.077188	3	23856	23808;23856;23912		57.249	30.026	1	4468200			43145	2509	21138	21228	49898;49899;49900	49899					0.09468052442230146
YLKEFIHIL	9	Unmodified	_YLKEFIHIL_					0	0	0		ENSG00000131966|ENST00000254286|ACTR10;ENST00000556748.5_1_14:58666901-58681958:+|nuORF;ENST00000556312.5_1_14:58666935-58675849:+|nuORF	ENSG00000131966|ENST00000254286|ACTR10	ENSG00000131966|ENST00000254286|ACTR10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	392.5659973025322	3	392.56562	1174.67503	0.86989	0.00034149	-0.35878	-0.00014085	0.51111	0.00020065	392.56533002671404	56.298	0.63555	58.267	58.057	58.693	1.9684					45	20	3	0	0	0	0.075994	2	23610	23610;23662		57.722	28.64	1	4010500			43146	2509	21138	21228	49901;49902	49901					0.09468052442230146
YLKFPQEMLL	10	Unmodified	_YLKFPQEMLL_					0	0	0		ENST00000302550.15_1_1:244849962-244852625:+|nuORF	ENST00000302550.15_1_1:244849962-244852625:+|nuORF	ENST00000302550.15_1_1:244849962-244852625:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	642.3563110232353	2	641.349217	1280.68388	2.0913	0.0013413	-0.24052	-0.00015426	1.8508	0.001187	641.3498305217025	77.256	0.76454	78.537	78.281	79.045	1.2809					55	23	5	0	0	0	0.72878	1	32555	32555		17.113	0	1	24342000			43147	5764	21139	21229	49903	49903					0.05476658016414149
YLKGAFLRFRI	11	Unmodified	_YLKGAFLRFRI_					0	0	0		ENST00000373758.4_1_10:65380866-65380983:+|nuORF	ENST00000373758.4_1_10:65380866-65380983:+|nuORF	ENST00000373758.4_1_10:65380866-65380983:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	461.9504577517509	3	461.946835	1382.81868	3.5349	0.0016329	2.7048	0.0012495	6.2397	0.0028824	461.9479617485846	96.936	0.15664	97.242	97.133	97.289	0.3062					15	4	4	0	0	0	1.039	1	40761	40761		0.45452	0.29519	1	11219000			43148	6163	21140	21230	49904	49904					0.14257899273184194
YLKKAPPS	8	Unmodified	_YLKKAPPS_					0	0	0		tr|A0A553SJ40|A0A553SJ40_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16025PE=3SV=1	tr|A0A553SJ40|A0A553SJ40_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16025PE=3SV=1	tr|A0A553SJ40|A0A553SJ40_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_16025PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	903.0731689333916	1	903.52983	902.522553	3.8646	0.0034917	0.0024298	2.1954E-06	3.867	0.0034939	903.5324926234173	92.489	0.88414	93.426	93.178	94.062	0.93623					35	26	2	0	0	0	2.3239	1	39189	39189		13.508	0	1	1138800			43149	16228	21141	21231	49905	49905					0.06739276765472368
YLKKPMII	8	Unmodified	_YLKKPMII_					0	0	0		ENST00000480294.1_1_6:10891760-10930631:+|nuORF;ENSG00000153157|ENST00000283141|SYCP2L	ENST00000480294.1_1_6:10891760-10930631:+|nuORF	ENST00000480294.1_1_6:10891760-10930631:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	503.3141967654228	2	503.311906	1004.60926	6.0508	0.0030454	-1.5701	-0.00079028	4.4806	0.0022551	503.3109658645261	88.619	0.51717	89.675	89.434	89.951	1.0562					26	15	3	0	0	0	0.87655	1	37411	37411		11.114	0.93107	1	1804600			43150	3347	21142	21232	49906	49906					0.10713939995673627
YLKKPMII	8	Unmodified	_YLKKPMII_					0	0	0		ENST00000480294.1_1_6:10891760-10930631:+|nuORF;ENSG00000153157|ENST00000283141|SYCP2L	ENST00000480294.1_1_6:10891760-10930631:+|nuORF	ENST00000480294.1_1_6:10891760-10930631:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	503.311906	1004.60926	4.4761	0.0022529	-0.67253	-0.00033849	3.8036	0.0019144	503.31167481057537	88.268	0.38068	89.715	89.572	89.953	1.4467	0.090906	-0.00042734	NaN	11.114	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1946200			43151	3347	21142	21232							0.10713939995673627
YLKLLTRAE	9	Unmodified	_YLKLLTRAE_					0	0	0			REV__ENST00000487342.1_1_22:21377642-21380401:+|nuORF	REV__ENST00000487342.1_1_22:21377642-21380401:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	553.8313476443291	2	553.832049	1105.64954	1.3705	0.00075904	-2.489	-0.0013785	-1.1185	-0.00061944	553.830432306972	74.095	1.3562	74.095	73.734	75.091	0					85	42	3	0	0	0	0.83753	1	30820	30820		1.8442	0	1	2354100	+		43152	8959	21143	21233	49907	49907					0.10094577919812764
YLKMHLLFL	9	Unmodified	_YLKMHLLFL_					0	0	0			REV__PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	REV__PLLP|p.Q90L|1|0.27|ENSG00000102934|chr16:57261937-57261937|T/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3448974490166	2	589.343738	1176.67292	2.5576	0.0015073	-0.6861	-0.00040435	1.8716	0.001103	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.82604	1	32116	32116		2.3027	0.65011	1	9601000	+		43153	14601	21144	21234	49908	49908					0.09165300432778167
YLKMVLKV	8	Unmodified	_YLKMVLKV_					0	0	0			REV__ENST00000377595.7_1_13:76178931-76178961:+|nuORF	REV__ENST00000377595.7_1_13:76178931-76178961:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	497.3124572634697	2	497.311906	992.60926	1.5945	0.00079295	0.065121	3.2385E-05	1.6596	0.00082533	497.31194619922746	76.024	0.79001	76.024	75.406	76.196	0					55	24	3	0	0	0	0.88958	2	31487	31487;31545		2.8892	0	1	3855800	+		43154	12731	21145	21235	49909;49910	49909					0.11265939995678309
YLKMVLKV	8	Unmodified	_YLKMVLKV_					0	0	0			REV__ENST00000377595.7_1_13:76178931-76178961:+|nuORF	REV__ENST00000377595.7_1_13:76178931-76178961:+|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	497.311906	992.60926	1.5945	0.00079295	0.065121	3.2385E-05	1.6596	0.00082533	497.31194619922746	76.024	0.79001	76.024	75.406	76.196	0	0	0	NaN	2.8892	55	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3855800	+		43155	12731	21145	21235							0.11265939995678309
YLKNKEKKAQ	10	Unmodified	_YLKNKEKKAQ_					0	0	0		ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2473632693291	3	417.24695	1248.71902	0.38018	0.00015863	0.28436	0.00011865	0.66454	0.00027728	417.24706929966385	11.608	0.46549	11.691	11.488	11.953	0.082848					41	14	5	0	0	0	0.69361	1	4846	4846		18.721	0	1	10274000			43156	2074	21146	21236	49911	49911					0.10461036868582596
YLKNKEKKAQ	10	Unmodified	_YLKNKEKKAQ_					0	0	0		ENST00000591475.5_1_18:61064221-61089576:-|nuORF;ENSG00000119541|ENST00000238497|VPS4B	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	ENST00000591475.5_1_18:61064221-61089576:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	417.2471191287041	3	417.24695	1248.71902	0.0095742	3.9948E-06	0.23798	9.9297E-05	0.24756	0.00010329	417.24717176723357	10.759	0.68407	11.521	11.142	11.826	0.76165					63	26	3	0	0	0	0.78179	1	4463	4463		14.218	0	1	2406400			43157	2074	21146	21236	49912	49912					0.10461036868582596
YLKQTSRIAIG	11	Unmodified	_YLKQTSRIAIG_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;ENST00000569764.1_16:18870304-18870499:-|nuORF	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.2473937869072	3	417.24695	1248.71902	0.38018	0.00015863	0.28436	0.00011865	0.66454	0.00027728	417.24706929966385	11.608	0.46549	11.691	11.488	11.953	0.082848					41	14	5	0	0	0	0.46792	1	4806	4806		24.957	6.2359	1	10274000			43158	3464	21147	21237	49913	49913					0.10461036868582596
YLKQTSRIAIG	11	Unmodified	_YLKQTSRIAIG_					0	0	0		nc|ENSG00000157106|Q96Q15-2|SMG1;ENSG00000157106|ENST00000446231|SMG1;nc|ENSG00000157106|Q96Q15-4|SMG1;nc|ENSG00000157106|Q96Q15-3|SMG1;ENST00000569764.1_16:18870304-18870499:-|nuORF	nc|ENSG00000157106|Q96Q15-2|SMG1	nc|ENSG00000157106|Q96Q15-2|SMG1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	417.24695	1248.71902	-0.52169	-0.00021767	0.40962	0.00017091	-0.11207	-4.6762E-05	417.247158541297	10.973	0.73845	11.643	11.338	12.077	0.66934	0.024559	0.00012579	NaN	24.957	57	23	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2744600			43159	3464	21147	21237							0.10461036868582596
YLKTRQVNR	9	Unmodified	_YLKTRQVNR_					0	0	0			REV__ENST00000249636.10_1_15:68480212-68480365:+|nuORF	REV__ENST00000249636.10_1_15:68480212-68480365:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3450805544853	2	589.343646	1176.67274	2.6941	0.0015878	-1.0088	-0.00059453	1.6853	0.00099323	589.3427092755744	75.97	2.0581	77.737	76.776	78.834	1.7672					189	65	4	0	0	0	0.83213	1	32049	32049		2.0598	0	1	8587800	+		43160	12142	21148	21238	49914	49914					0.09147016757151505
YLKVKRNVLK	10	Unmodified	_YLKVKRNVLK_					0	0	0		ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	421.2794067263603	3	420.943202	1259.80778	2.1311	0.00089706	2.2528	0.0009483	4.3839	0.0018454	420.94418737291255	47.134	0.31757	48.516	48.378	48.695	1.3825					22	9	3	0	0	0	0.83529	1	19730	19730		8.4443	2.2525	1	2859500			43161	6509	21149	21239	49915	49915					0.1882649689889604
YLKVKRNVLK	10	Unmodified	_YLKVKRNVLK_					0	0	0		ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	ENST00000432746.1_1_7:102781798-102782185:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	420.943202	1259.80778	2.1311	0.00089706	2.2528	0.0009483	4.3839	0.0018454	420.94418737291255	47.134	0.31757	48.516	48.378	48.695	1.3825	-0.05773	-0.00067477	NaN	8.4443	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2859500			43162	6509	21149	21239							0.1882649689889604
YLKVMKGKR	9	Unmodified	_YLKVMKGKR_					0	0	0			REV__ENSG00000123689|ENST00000367029|G0S2	REV__ENSG00000123689|ENST00000367029|G0S2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8461181521416	2	561.844436	1121.67432	1.5337	0.00086168	1.9069	0.0010714	3.4406	0.0019331	561.845477827587	79.569	0.49406	81.285	81.106	81.6	1.7167					33	15	3	0	0	0	0.82604	1	33354	33354		2.3027	0	1	1073900	+		43163	9626	21150	21240	49916	49916					0.11834934521539253
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	345.4837524294853	4	345.485071	1377.91118	0.56188	0.00019412	-0.6853	-0.00023676	-0.12343	-4.2642E-05	345.73560029635115	27.512	0.77633	27.784	27.149	27.926	0.27119					46	24	2	0	0	0	1.0405	1	11510	11510		0	0	1	1283700			43164	16365	21151	21241	49917	49917					0.23733984286695886
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	345.2381164431572	4	345.485071	1377.91118	-0.095827	-3.3107E-05	1.333	0.00046053	1.2372	0.00042742	345.4854643750603	22.599	0.74776	23.813	23.45	24.198	1.2145					51	23	3	0	0	0	0.14606	1	9589	9589		0	0	1	3555700			43165	16365	21151	21241	49918	49918					0.23733984286695886
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	345.4847595095634	4	345.485071	1377.91118	0.14379	4.9676E-05	0.68653	0.00023719	0.83032	0.00028686	345.7362658095653	25.057	0.60576	26.774	26.391	26.997	1.7167					50	19	3	0	0	0	1.0405	1	10359	10359		0	0	1	2494100			43166	16365	21151	21241	49919	49919					0.23733984286695886
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2382690310478	4	345.485071	1377.91118	0.19034	6.576E-05	-0.68266	-0.00023585	-0.49231	-0.00017009	345.48455369156716	26.2	1.0023	27.934	27.293	28.295	1.7342					61	32	3	0	0	0	0.14606	1	10762	10762		0	0	1	2751300			43167	16365	21151	21241	49920	49920					0.23733984286695886
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	345.2386962771416	4	345.485071	1377.91118	0.072957	2.5205E-05	0.7335	0.00025341	0.80646	0.00027862	345.48553729426493	23.16	0.74202	24.811	24.467	25.209	1.6511					52	23	4	0	0	0	0.14606	1	9602	9602		0	0	1	2263400			43168	16365	21151	21241	49921	49921					0.23733984286695886
YLKVVFIKKLK	11	Unmodified	_YLKVVFIKKLK_					0	0	0		tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	tr|A0A553SM37|A0A553SM37_NIACIClassISAM-dependentrRNAmethyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_21735PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		4	345.485071	1377.91118	0.026733	9.236E-06	0.3706	0.00012804	0.39734	0.00013727	345.73592305176896	22.133	0.51286	23.749	23.377	23.89	1.6158	-0.096913	-0.0008137	NaN	0	42	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2681600			43169	16365	21151	21241							0.23733984286695886
YLKWRLIRLKK	11	Unmodified	_YLKWRLIRLKK_					0	0	0		chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	303.8845703005791	5	304.202591	1515.97657	-2.1792	-0.0006629	-1.5852	-0.00048221	-3.7643	-0.0011451	304.2016935933138	43.821	0.15891	43.821	43.715	43.873	0					6	4	2	0	0	0	0.14606	1	18316	18316		0	0	1	150230			43170	168	21152	21242	49922	49922					0.2392239853238607
YLKWRLIRLKK	11	Unmodified	_YLKWRLIRLKK_					0	0	0		chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	chr1:20779911-20780419|105|10.08|0.36|4.81|-|0|HP1BP3,None|1	MSMS	GG20161007_CRH_Patient100_W632_02	4	758.9948608279228	2	758.995563	1515.97657	NaN	NaN	NaN	NaN	NaN	NaN	NaN	99.838	1	100.06	99.563	100.56	0.22545								0	0	0	0.63775	1	41991	41991		0	0	1				43171	168	21152	21242	49923	49923					0.2392239853238607
YLKWRVKK	8	Unmodified	_YLKWRVKK_					0	0	0		ENSG00000212127|ENST00000537503|TAS2R14	ENSG00000212127|ENST00000537503|TAS2R14	ENSG00000212127|ENST00000537503|TAS2R14	MSMS	GG20161007_CRH_Patient100_W632_01	3	374.2378723025322	3	374.237838	1119.69168	NaN	NaN	NaN	NaN	NaN	NaN	NaN	25.297	1	26.557	26.057	27.057	1.2594								0	0	0	1.0178	1	10592	10592		0.40072	0	1				43172	5207	21153	21243	49924	49924					0.13662598118821734
YLKYFLGTY	9	Unmodified	_YLKYFLGTY_					0	0	0			REV__nc|ENSG00000170917|P53370-2|NUDT6	REV__nc|ENSG00000170917|P53370-2|NUDT6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3104125857353	2	584.307875	1166.6012	3.2066	0.0018737	-0.30148	-0.00017616	2.9052	0.0016975	584.3076148907123	94.446	0.50162	95.635	95.302	95.803	1.1887					44	15	4	0	0	0	0.54523	1	39685	39685		13.508	0.97634	1	18255000	+		43173	11003	21154	21244	49925	49925					0.024560842799019156
YLLAPVGGWL	10	Unmodified	_YLLAPVGGWL_					0	0	0		SLC15A3|p.F246Lfs*69|1|0.07|ENSG00000110446|chr11:60946645-60946645|G/-|frameshift_variant;ENSG00000110446|ENST00000227880|SLC15A3	SLC15A3|p.F246Lfs*69|1|0.07|ENSG00000110446|chr11:60946645-60946645|G/-|frameshift_variant	SLC15A3|p.F246Lfs*69|1|0.07|ENSG00000110446|chr11:60946645-60946645|G/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3160888552666	2	544.810585	1087.60662	1.2855	0.00070035	1.7425	0.00094934	3.028	0.0016497	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.84024	1	29915	29915		7.9102	0	1	6733700			43174	1706	21155	21245	49926	49926					0.06631807862390815
YLLDFIVPV	9	Unmodified	_YLLDFIVPV_					0	0	0			REV__HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|122|1|anti-sense	REV__HUERS-P1-int_dup332|chr11:14173965-14176863:-|1.0998466405592555|0.013893236758844|6.31|420.0|122|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.8146240115166	2	539.812793	1077.61103	1.7886	0.00096553	1.4769	0.00079726	3.2656	0.0017628	539.8131098901911	46.341	0.43317	47.716	47.555	47.988	1.3751					20	13	2	0	0	0	0.15478	1	19435	19435		38.151	0	1	1543500	+		43175	14227	21156	21246	49927	49927					0.0753327228528633
YLLDLHSYL	9	Unmodified	_YLLDLHSYL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8030273318291	2	568.802957	1135.59136	1.4661	0.00083394	-1.8249	-0.001038	-0.35875	-0.00020406	568.8023494621218	73.101	0.34412	73.101	72.872	73.216	0					23	10	3	0	0	0	0.018723	2	30451	30403;30451		100.37	25.949	1	8059900			43176	3111	21157	21247	49928;49929	49929					0.028988962745188473
YLLDLHSYL	9	Unmodified	_YLLDLHSYL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	568.8026611208916	2	568.802957	1135.59136	1.8873	0.0010735	-2.2849	-0.0012997	-0.39762	-0.00022617	568.8018397898425	72.612	0.37671	72.937	72.705	73.082	0.32494					19	11	2	0	0	0	0.0082953	1	30397	30397		109.63	16.807	1	9011600			43177	3111	21157	21247	49930	49930					0.028988962745188473
YLLDLHSYL	9	Unmodified	_YLLDLHSYL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	568.8033935427666	2	568.802957	1135.59136	1.9792	0.0011258	-1.337	-0.00076047	0.64222	0.0003653	568.8024491926778	71.487	0.55254	72.828	72.601	73.153	1.3415					41	17	4	0	0	0	0.0054014	3	30004	29957;30004;30043		120.45	38.837	1	29033000			43178	3111	21157	21247	49931;49932;49933	49932					0.028988962745188473
YLLDLHSYL	9	Unmodified	_YLLDLHSYL_					0	0	0		nc|ENSG00000145495|O60337-6|MARCHF6;nc|ENSG00000145495|O60337-5|MARCHF6;ENSG00000145495|ENST00000274140|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	nc|ENSG00000145495|O60337-6|MARCHF6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	568.8044921755791	2	568.802957	1135.59136	1.1465	0.00065212	0.19315	0.00010986	1.3396	0.00076198	568.8033788599241	71.009	0.43082	72.833	72.667	73.098	1.824					38	13	5	0	0	0	0.0037165	2	29820	29781;29820		125.62	32.802	1	31710000			43179	3111	21157	21247	49934;49935	49935					0.028988962745188473
YLLDYPNNLL	10	Unmodified	_YLLDYPNNLL_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	619.8700439333916	2	619.326796	1236.63904	2.1921	0.0013576	-1.6674	-0.0010326	0.52475	0.00032499	619.3259878179091	80.375	0.37704	80.375	80.195	80.572	0					25	11	3	0	0	0	0.12458	1	33474	33474		16.149	4.6544	1	924010			43180	2533	21158	21248	49936	49936					0.03018550474712356
YLLDYPNNLL	10	Unmodified	_YLLDYPNNLL_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	619.8715087771416	2	619.326796	1236.63904	1.7428	0.0010793	-1.2014	-0.00074408	0.54133	0.00033526	619.3263331962625	79.98	0.37876	80.281	80.037	80.416	0.30046					18	11	2	0	0	0	0.12437	1	33414	33414		18.146	7.9958	1	931330			43181	2533	21158	21248	49937	49937					0.03018550474712356
YLLDYPNNLL	10	Unmodified	_YLLDYPNNLL_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.3282348513603	2	619.326796	1236.63904	2.5264	0.0015646	0.95868	0.00059374	3.485	0.0021584	619.3276531037376	79.02	0.31004	80.287	80.099	80.409	1.2668					15	9	2	0	0	0	0.043055	1	33183	33183		81.89	41.651	1	2375100			43182	2533	21158	21248	49938	49938					0.03018550474712356
YLLDYPNNLL	10	Unmodified	_YLLDYPNNLL_					0	0	0		ENSG00000132466|ENST00000358602|ANKRD17;nc|ENSG00000132466|O75179-6|ANKRD17;nc|ENSG00000132466|O75179-2|ANKRD17;nc|ENSG00000132466|O75179-3|ANKRD17;nc|ENSG00000132466|O75179-4|ANKRD17;nc|ENSG00000132466|O75179-5|ANKRD17;nc|ENSG00000132466|O75179-7|ANKRD17;ENST00000514252.1_1_4:73978989-74017230:-|nuORF	ENSG00000132466|ENST00000358602|ANKRD17	ENSG00000132466|ENST00000358602|ANKRD17	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.8709594607353	2	619.326796	1236.63904	2.0159	0.0012485	2.3026	0.001426	4.3185	0.0026746	619.3288408850475	78.538	0.21706	80.273	80.133	80.35	1.735					15	6	3	0	0	0	0.11498	1	32933	32933		45.7	24.163	1	4087900			43183	2533	21158	21248	49939	49939					0.03018550474712356
YLLESVNKL	9	Unmodified	_YLLESVNKL_					0	0	0		ENSG00000197632|ENST00000299502|SERPINB2	ENSG00000197632|ENST00000299502|SERPINB2	ENSG00000197632|ENST00000299502|SERPINB2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	539.8137084841728	2	539.810782	1077.60701	1.7739	0.00095756	3.0314	0.0016364	4.8052	0.0025939	539.8126319839263	47.869	0.18549	48.199	48.103	48.289	0.33034					10	5	2	0	0	0	0.25667	1	20073	20073		27.629	8.3718	1	431740			43184	5018	21159	21249	49940	49940					0.0713118279156788
YLLFLTFVMV	10	Unmodified	_YLLFLTFVMV_					0	0	0			REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	REV__nc|ENSG00000154258|Q8IUA7-4|ABCA9	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	623.8114501833916	2	623.351228	1244.6879	2.5902	0.0016146	4.1729	0.0026012	6.7631	0.0042158	623.353742015075	62.314	0.095177	63.731	63.652	63.747	1.4177					4	2	2	0	0	0	0.12519	1	26101	26101		3.9444	0	1	185180	+		43185	10466	21160	21250	49941	49941					0.07534747510089801
YLLHTMVLI	9	Oxidation (M)	_YLLHTM(Oxidation (M))VLI_		YLLHTM(1)VLI		YLLHTM(51)VLI	0	0	1		ENST00000454171.1_1_7:84658221-84658887:+|nuORF	ENST00000454171.1_1_7:84658221-84658887:+|nuORF	ENST00000454171.1_1_7:84658221-84658887:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.8167602419853	2	559.817553	1117.62055	2.135	0.0011952	-0.96961	-0.0005428	1.1654	0.00065242	559.8159443837069	71.974	1.0509	73.315	73.061	74.112	1.3415					112	33	5	0	0	0	0.09539	1	30227	30227		50.855	14.389	1	21044000			43186	6638	21161	21251	49942	49942		106			0.06644717299172953
YLLICVMVVCL	11	Unmodified	_YLLICVMVVCL_					0	0	0			REV__SLC30A1|p.E338Lfs*17|1|0.35|ENSG00000170385|chr1:211575894-211575900|CAGATTC/-|frameshift_variant	REV__SLC30A1|p.E338Lfs*17|1|0.35|ENSG00000170385|chr1:211575894-211575900|CAGATTC/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	634.8483764529228	2	634.844399	1267.67424	2.0668	0.0013121	4.4371	0.0028169	6.5039	0.004129	634.8481937546453	78.444	0.473	78.444	78.22	78.693	0					28	14	3	0	0	0	0.78502	1	32654	32654		15.847	1.0089	1	1074000	+		43187	10984	21162	21252	49943	49943					0.05111430415013274
YLLIILLMPVL	11	Unmodified	_YLLIILLMPVL_					0	0	0		ENSG00000152766|ENST00000371930|ANKRD22	ENSG00000152766|ENST00000371930|ANKRD22	ENSG00000152766|ENST00000371930|ANKRD22	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2828857302666	3	434.281944	1299.824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	35.914	1	36.216	35.716	36.716	0.30197								0	0	0	0.63775	1	15100	15100		1.4551	0	1				43188	3336	21163	21253	49944	49944					0.18608442020786242
YLLIILLMPVL	11	Unmodified	_YLLIILLMPVL_					0	0	0		ENSG00000152766|ENST00000371930|ANKRD22	ENSG00000152766|ENST00000371930|ANKRD22	ENSG00000152766|ENST00000371930|ANKRD22	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.2827026247978	3	434.281944	1299.824	NaN	NaN	NaN	NaN	NaN	NaN	NaN	36.094	1	36.396	35.896	36.896	0.30197								0	0	0	0.63775	1	15177	15177		1.4551	0.12547	1				43189	3336	21163	21253	49945	49945					0.18608442020786242
YLLIPLLER	9	Unmodified	_YLLIPLLER_					0	0	0		nc|ENSG00000184313|Q68CQ1-2|MROH7;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7;ENSG00000184313|ENST00000421030|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3549072146416	2	565.352617	1128.69068	2.0389	0.0011527	0.83957	0.00047466	2.8785	0.0016274	565.353083799911	84.436	0.59512	84.436	84.058	84.653	0					40	18	3	0	0	0	0.31127	1	35221	35221		26.268	1.2772	1	3490900			43190	4688	21164	21254	49946	49946					0.13148338959263128
YLLIPLLER	9	Unmodified	_YLLIPLLER_					0	0	0		nc|ENSG00000184313|Q68CQ1-2|MROH7;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7;ENSG00000184313|ENST00000421030|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3597289919853	2	565.352617	1128.69068	3.0643	0.0017324	1.4788	0.00083607	4.5431	0.0025685	565.3537190921885	82.81	0.55573	84.022	83.731	84.286	1.2125					60	17	5	0	0	0	0.13191	1	34682	34682		43.772	1.8168	1	9862100			43191	4688	21164	21254	49947	49947					0.13148338959263128
YLLIPLLER	9	Unmodified	_YLLIPLLER_					0	0	0		nc|ENSG00000184313|Q68CQ1-2|MROH7;nc|ENSG00000184313|Q68CQ1-1|MROH7;nc|ENSG00000184313|Q68CQ1-9|MROH7;ENSG00000184313|ENST00000421030|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	nc|ENSG00000184313|Q68CQ1-2|MROH7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3569213747978	2	565.352617	1128.69068	3.2918	0.001861	1.2253	0.00069272	4.5171	0.0025537	565.3535613762366	82.3	0.77951	83.97	83.607	84.386	1.67					56	24	4	0	0	0	0.23219	1	34453	34453		31.268	0	1	9118300			43192	4688	21164	21254	49948	49948					0.13148338959263128
YLLKNFKVP	9	Unmodified	_YLLKNFKVP_					0	0	0			REV__ENSG00000144810|ENST00000652472|COL8A1	REV__ENSG00000144810|ENST00000652472|COL8A1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.3439208865166	2	561.33951	1120.66447	2.9032	0.0016297	0.031502	1.7683E-05	2.9347	0.0016474	561.3393109795134	70.897	0.60827	72.246	72.028	72.636	1.3486					63	19	4	0	0	0	0.66839	1	29853	29853		8.5933	0.68312	1	37703000	+		43193	10261	21165	21255	49949	49949					0.10896069787804663
YLLKYFNK	8	Unmodified	_YLLKYFNK_					0	0	0		chr7:55952276-55953179|426|15.46|0.84|4.21|+|ENST00000443449|MRPS17,MRPS17;ENSG00000239789|ENST00000285298|MRPS17	chr7:55952276-55953179|426|15.46|0.84|4.21|+|ENST00000443449|MRPS17,MRPS17	chr7:55952276-55953179|426|15.46|0.84|4.21|+|ENST00000443449|MRPS17,MRPS17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.3169433474541	2	544.810585	1087.60662	1.2855	0.00070035	1.7425	0.00094934	3.028	0.0016497	545.3131241653123	70.833	1.8659	72.671	71.624	73.49	1.8378					81	59	2	0	0	0	0.87935	1	29867	29867		9.3474	0	1	6733700			43194	284	21166	21256	49950	49950					0.06631807862368078
YLLLFILDL	9	Unmodified	_YLLLFILDL_					0	0	0		ENSG00000141540|ENST00000269346|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	561.8487426638603	2	561.844093	1121.67363	2.7179	0.001527	2.7316	0.0015348	5.4495	0.0030618	561.8457624457902	79.923	0.52508	81.174	80.925	81.45	1.2512					32	16	3	0	0	0	0.75267	1	33629	33629		5.2307	0	1	1387800			43195	2966	21167	21257	49951	49951					0.11766418353477093
YLLLFILDL	9	Unmodified	_YLLLFILDL_					0	0	0		ENSG00000141540|ENST00000269346|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	ENSG00000141540|ENST00000269346|TTYH2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	561.8470947146416	2	561.844093	1121.67363	1.5337	0.00086168	2.517	0.0014141	4.0506	0.0022758	561.845477827587	79.569	0.49406	81.285	81.106	81.6	1.7167					33	15	3	0	0	0	0.75267	1	33404	33404		5.2307	0	1	1073900			43196	2966	21167	21257	49952	49952					0.11766418353477093
YLLLGLHG	8	Unmodified	_YLLLGLHG_					0	0	0		KCNK1|p.I258Hfs*15|1|0.05|ENSG00000135750|chr1:233671290-233671291|-/CATGGATGGCAGCAGGCAAAGAGAGAGAG|frameshift_variant	KCNK1|p.I258Hfs*15|1|0.05|ENSG00000135750|chr1:233671290-233671291|-/CATGGATGGCAGCAGGCAAAGAGAGAGAG|frameshift_variant	KCNK1|p.I258Hfs*15|1|0.05|ENSG00000135750|chr1:233671290-233671291|-/CATGGATGGCAGCAGGCAAAGAGAGAGAG|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	443.2634155154228	2	443.263271	884.511988	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.06	1	104.22	103.72	104.72	0.16055								0	0	0	1.0178	1	44012	44012		0.79363	0	1				43197	7663	21168	21258	49953	49953					0.06511294111055577
YLLNPDKHSF	10	Unmodified	_YLLNPDKHSF_					0	0	0		tr|A0A7D6VPK0|A0A7D6VPK0_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23315PE=3SV=1	tr|A0A7D6VPK0|A0A7D6VPK0_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23315PE=3SV=1	tr|A0A7D6VPK0|A0A7D6VPK0_9CLOTIg-likedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_23315PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	616.8675414919853	2	617.316763	1232.61897	2.0881	0.001289	2.7678	0.0017086	4.8559	0.0029976	617.3185626929316	72.149	0.28214	73.479	73.361	73.643	1.3297					11	8	2	0	0	0	0.1248	1	30299	30299		13.042	1.4022	1	511600			43198	16770	21169	21259	49954	49954					0.011967995347504257
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;nc|ENSG00000100201|Q92841-1|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.8216430544853	2	519.820953	1037.62735	2.1055	0.0010945	-0.18706	-9.7236E-05	1.9185	0.00099726	519.8209799311683	75.169	0.9792	75.169	74.872	75.852	0					84	30	5	0	0	0	0.051525	4	31238	31238;31283;31322;31361		67.413	27.456	1	102440000			43199	1252;400;7434	21170	21260	49955;49956;49957;49958	49955					0.11004398242016578
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;nc|ENSG00000100201|Q92841-1|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	519.8221313357353	2	519.820953	1037.62735	2.8002	0.0014556	0.015216	7.9095E-06	2.8155	0.0014635	519.8211408245813	74.587	0.90839	74.912	74.613	75.522	0.32464					86	28	5	0	0	0	0.051525	4	31135	31135;31172;31211;31250		67.413	27.456	1	125600000			43200	1252;400;7434	21170	21260	49959;49960;49961;49962	49959					0.11004398242016578
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;nc|ENSG00000100201|Q92841-1|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.8273803591728	2	519.820953	1037.62735	3.6657	0.0019055	-0.17323	-9.0048E-05	3.4925	0.0018155	519.8214921081087	73.445	1.1313	74.763	74.307	75.438	1.318					116	35	5	0	0	0	0.035716	6	30746	30746;30784;30823;30862;30901;30948		79.935	27.666	1	251070000			43201	1252;400;7434	21170	21260	49963;49964;49965;49966;49967;49968	49963					0.11004398242016578
YLLPAIVHI	9	Unmodified	_YLLPAIVHI_					0	0	0		DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;ENSG00000108654|ENST00000225792|DDX5;ENST00000583894.1_1_17:62499542-62500133:-|nuORF;nc|ENSG00000100201|Q92841-1|DDX17;nc|ENSG00000100201|Q92841-2|DDX17;ENSG00000100201|ENST00000403230|DDX17;ENST00000432525.5_1_22:38886367-38903636:-|nuORF;ENST00000216019.11_1_22:38888049-38902242:-|nuORF;nc|ENSG00000100201|Q92841-3|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	DDX5|p.D515Efs*65|1|0.81|ENSG00000108654|chr17:64500196-64500223|TCTTTTAAGCAGGCTAGAGTAACCTCTG/-|frameshift_variant;nc|ENSG00000100201|Q92841-1|DDX17;ENST00000581230.5_1_17:62498125-62502378:-|nuORF	nc|ENSG00000100201|Q92841-1|DDX17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	519.8250610232353	2	519.820953	1037.62735	2.6806	0.0013934	0.38588	0.00020059	3.0665	0.001594	519.821653447308	72.878	1.1934	74.688	74.167	75.361	1.8101					125	37	5	0	0	0	0.035716	7	30510	30466;30510;30548;30587;30626;30665;30710		79.935	39.977	1	211170000			43202	1252;400;7434	21170	21260	49969;49970;49971;49972;49973;49974;49975	49970					0.11004398242016578
YLLPSLYPL	9	Unmodified	_YLLPSLYPL_					0	0	0		ENST00000273963.9_1_4:88116727-88116796:-|nuORF	ENST00000273963.9_1_4:88116727-88116796:-|nuORF	ENST00000273963.9_1_4:88116727-88116796:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.8124267458916	2	539.812793	1077.61103	1.3807	0.00074531	1.486	0.00080215	2.8666	0.0015475	539.8142064011855	45.902	0.30806	47.873	47.695	48.003	1.9703					22	9	3	0	0	0	0.34572	1	19185	19185		23.148	2.2772	1	1396700			43203	5685	21171	21261	49976	49976					0.07533272285263592
YLLRRCKK	8	Unmodified	_YLLRRCKK_					0	0	0			REV__nc|ENSG00000114439|Q8WY36-3|BBX	REV__nc|ENSG00000114439|Q8WY36-3|BBX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	540.3318969607353	2	540.328953	1078.64335	1.4285	0.00077184	2.7294	0.0014748	4.1579	0.0022466	540.3304715114759	70.13	2.2121	70.13	69.202	71.415	0					121	70	3	0	0	0	0.89176	1	29573	29573		0.79363	0	1	3238400	+		43204	14412	21172	21262	49977	49977					0.107177812072905
YLLVCILVFR	10	Unmodified	_YLLVCILVFR_					0	0	0		tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8709594607353	2	619.87012	1237.72569	2.0914	0.0012964	-1.389	-0.000861	0.70245	0.00043543	619.8689414737491	79.501	2.5349	79.501	78.505	81.04	0					226	81	4	0	0	0	0.89422	1	33420	33420		1.8442	0	1	9211600			43205	16339	21173	21263	49978	49978					0.11633258495567134
YLLVCILVFR	10	Unmodified	_YLLVCILVFR_					0	0	0		tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	tr|A0A553SLL2|A0A553SLL2_NIACIPhosphatasePAP2familyproteinOS=NialliacirculansOX=1397GN=CEQ21_20820PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	619.8712646365166	2	619.87012	1237.72569	1.6732	0.0010372	-0.38185	-0.0002367	1.2914	0.00080047	619.869534862898	79.249	3.1668	79.55	78.665	81.832	0.30046					306	101	4	0	0	0	0.89422	1	33360	33360		1.8442	1.8442	1	8897800			43206	16339	21173	21263	49979	49979					0.11633258495567134
YLLVSSLSSL	10	Unmodified	_YLLVSSLSSL_					0	0	0			REV__ENSG00000144589|ENST00000456909|STK11IP	REV__ENSG00000144589|ENST00000456909|STK11IP	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	541.3126708865166	2	541.310615	1080.60668	2.1799	0.00118	0.90217	0.00048836	3.0821	0.0016684	541.3110747735668	82.07	0.30794	82.35	82.244	82.551	0.2802					15	9	2	0	0	0	0.846	1	34351	34351		7.2892	0.93513	1	2419500	+		43207	10255	21174	21264	49980	49980					0.06959763071722591
YLLVTAPLML	10	Unmodified	_YLLVTAPLML_					0	0	0			REV__ENSG00000140323|ENST00000267889|DISP2	REV__ENSG00000140323|ENST00000267889|DISP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	567.3415405154228	2	567.335578	1132.6566	2.6318	0.0014931	4.1178	0.0023362	6.7496	0.0038293	567.3359039839885	69.677	1.0098	71.53	71.324	72.334	1.853					42	31	3	0	0	0	0.38674	1	29207	29207		34.102	8.7031	1	3124700	+		43208	10121	21175	21265	49981	49981					0.09558174475978376
YLMHVNELW	9	Unmodified	_YLMHVNELW_					0	0	0			REV__nc|ENSG00000089123|Q9H6P5-3|TASP1	REV__nc|ENSG00000089123|Q9H6P5-3|TASP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	602.7927123904228	2	602.794609	1203.57467	2.6616	0.0016044	-4.3976	-0.0026509	-1.7361	-0.0010465	602.7923535966875	80.022	0.55811	81.274	81.017	81.575	1.2512					32	17	3	0	0	0	0.37357	1	33626	33626		21.747	0	1	1209000	+		43209	13347	21176	21266	49982	49982					-0.018979278830784096
YLMKKRSVTI	10	Unmodified	_YLMKKRSVTI_					0	0	0		ENST00000527313.6_1_17:80477872-80529633:+|nuORF;FOXK2-NARF|1|fusion;nc|ENSG00000141568|Q01167-3|FOXK2;nc|ENSG00000141568|Q01167-2|FOXK2;FOXK2-NARF|2|fusion;ENSG00000141568|ENST00000335255|FOXK2	ENST00000527313.6_1_17:80477872-80529633:+|nuORF	ENST00000527313.6_1_17:80477872-80529633:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	619.8710204958916	2	619.868108	1237.72166	2.2512	0.0013954	2.2477	0.0013933	4.4989	0.0027887	619.8691419303617	80.651	1.1962	80.651	80.447	81.643	0					58	38	2	0	0	0	0.87343	1	33527	33527		4.3292	0	1	2186700			43210	2969	21177	21267	49983	49983					0.11231169001894159
YLMKKRSVTI	10	Unmodified	_YLMKKRSVTI_					0	0	0		ENST00000527313.6_1_17:80477872-80529633:+|nuORF;FOXK2-NARF|1|fusion;nc|ENSG00000141568|Q01167-3|FOXK2;nc|ENSG00000141568|Q01167-2|FOXK2;FOXK2-NARF|2|fusion;ENSG00000141568|ENST00000335255|FOXK2	ENST00000527313.6_1_17:80477872-80529633:+|nuORF	ENST00000527313.6_1_17:80477872-80529633:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8707763552666	2	619.868108	1237.72166	2.2157	0.0013734	2.4227	0.0015017	4.6383	0.0028752	619.8693637329935	76.181	2.1643	77.475	76.512	78.676	1.2938					155	69	3	0	0	0	0.89646	1	31845	31845		1.8442	0	1	2579300			43211	2969	21177	21267	49984	49984					0.11231169001894159
YLNALVHLI	9	Unmodified	_YLNALVHLI_					0	0	0		nc|ENSG00000100731|Q96RV3-4|PCNX1;ENSG00000100731|ENST00000304743|PCNX1;ENST00000556516.1_1_14:71517389-71527455:+|nuORF;nc|ENSG00000197136|Q9H6A9-3|PCNX3;ENST00000439247.2_1_11:65394334-65404446:+|nuORF;ENSG00000197136|ENST00000355703|PCNX3	nc|ENSG00000100731|Q96RV3-4|PCNX1;nc|ENSG00000197136|Q9H6A9-3|PCNX3	nc|ENSG00000197136|Q9H6A9-3|PCNX3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	527.7769042849541	2	528.316035	1054.61752	2.9751	0.0015718	-0.72227	-0.00038159	2.2528	0.0011902	528.3162937418251	69.788	0.31497	71.626	71.436	71.751	1.8378					13	9	2	0	0	0	0.05429	1	29266	29266		42.968	8.7807	1	770770			43212	4983;1299	21178	21268	49985	49985					0.09239210236660256
YLNDILGHYV	10	Unmodified	_YLNDILGHYV_					0	0	0		NEB|p.K428N|1|0.18|ENSG00000183091|chr2:151697431-151697431|T/G|missense_variant	NEB|p.K428N|1|0.18|ENSG00000183091|chr2:151697431-151697431|T/G|missense_variant	NEB|p.K428N|1|0.18|ENSG00000183091|chr2:151697431-151697431|T/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	603.8141357302666	2	603.811313	1205.60807	3.2974	0.001991	3.6019	0.0021749	6.8994	0.0041659	603.8137659446185	96.044	0.30027	96.446	96.366	96.666	0.40208					18	9	3	0	0	0	0.6819	1	40410	40410		19.257	0	1	4198100			43213	8037	21179	21269	49986	49986					0.013493971604702892
YLNESRKVLK	10	Unmodified	_YLNESRKVLK_					0	0	0		tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.2475463747978	3	417.24695	1248.71902	-0.58344	-0.00024344	2.4659	0.0010289	1.8825	0.00078545	417.24801420444913	11.833	0.36829	11.833	11.696	12.064	0					32	11	4	0	0	0	0.75883	1	4925	4925		15.739	0	1	12725000			43214	16223	21180	21270	49987	49987					0.10461036868559859
YLNGDAKVL	9	Unmodified	_YLNGDAKVL_					0	0	0		tr|A0A553SSH5|A0A553SSH5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03105PE=4SV=1	tr|A0A553SSH5|A0A553SSH5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03105PE=4SV=1	tr|A0A553SSH5|A0A553SSH5_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_03105PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	496.7765380740166	2	496.7742	991.533846	3.0114	0.001496	-0.32459	-0.00016125	2.6868	0.0013347	496.7743590716678	70.567	0.41672	71.921	71.744	72.161	1.3536					33	12	3	0	0	0	0.75267	1	29702	29702		5.2307	0	1	6049500			43215	16612	21181	21271	49988	49988					0.037740540689469526
YLNILSELI	9	Unmodified	_YLNILSELI_					0	0	0		ENST00000315183.11_2_16:24836827-24836932:+|nuORF	ENST00000315183.11_2_16:24836827-24836932:+|nuORF	ENST00000315183.11_2_16:24836827-24836932:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	539.7506591677666	2	539.313158	1076.61176	4.2907	0.002314	2.2987	0.0012397	6.5894	0.0035538	539.3148211589379	92.109	0.32083	93.045	92.923	93.244	0.93623					15	9	2	0	0	0	0.11333	1	38794	38794		13.508	0	1	509930			43216	5825	21182	21272	49989	49989					0.07652066934338109
YLNKLNRTR	9	Unmodified	_YLNKLNRTR_					0	0	0			REV__nc|ENSG00000183091|P20929-4|NEB	REV__nc|ENSG00000183091|P20929-4|NEB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3439819216728	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.82604	1	31831	31831		2.3027	0	1	9601000	+		43217	11375	21183	21273	49990	49990					0.09147016757128767
YLNLFIEEC	9	Unmodified	_YLNLFIEEC_					0	0	0		ENSG00000079313|ENST00000170168|REXO1	ENSG00000079313|ENST00000170168|REXO1	ENSG00000079313|ENST00000170168|REXO1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	571.7726928591728	2	572.273175	1142.5318	1.4862	0.00085053	3.738	0.0021391	5.2242	0.0029897	572.2754959752257	72.265	0.43973	72.265	71.892	72.332	0					14	13	2	0	0	0	0.11812	1	30026	30026		4.756	1.8668	1	442750			43218	989	21184	21274	49991	49991					-0.03376742731165905
YLNPGKKRGG	10	Unmodified	_YLNPGKKRGG_					0	0	0		ENSG00000189280|ENST00000338513|GJB5	ENSG00000189280|ENST00000338513|GJB5	ENSG00000189280|ENST00000338513|GJB5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.3169433474541	2	545.311815	1088.60908	2.2452	0.0012243	2.8605	0.0015599	5.1057	0.0027842	545.3133821633107	71.084	2.2843	72.426	71.828	74.112	1.3415					142	73	2	0	0	0	0.88022	1	30375	30375		3.5965	1.2938	1	12778000			43219	4902	21185	21275	49992	49992					0.06831656320036927
YLNVQVKEL	9	Unmodified	_YLNVQVKEL_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3165161013603	2	553.316232	1104.61791	2.2024	0.0012186	-1.5421	-0.00085328	0.66025	0.00036532	553.314719834055	40.685	0.31296	42.01	41.866	42.178	1.3254					24	9	3	0	0	0	0.099302	2	17099	17047;17099		49.554	15.153	1	1740600			43220	1841	21186	21276	49993;49994	49994					0.06978585165848017
YLNVQVKEL	9	Unmodified	_YLNVQVKEL_					0	0	0		ENST00000462668.5_1_3:160131924-160151594:+|nuORF;nc|ENSG00000113810|Q9NTJ3-2|SMC4;ENSG00000113810|ENST00000357388|SMC4	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	ENST00000462668.5_1_3:160131924-160151594:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3188964724541	2	553.316232	1104.61791	1.9548	0.0010816	0.24854	0.00013752	2.2033	0.0012191	553.3160788940538	40.323	0.30863	42.185	42.019	42.327	1.8624					19	9	3	0	0	0	0.15456	1	16891	16891		38.176	10.547	1	1376600			43221	1841	21186	21276	49995	49995					0.06978585165848017
YLPEDFIRV	9	Unmodified	_YLPEDFIRV_					0	0	0		ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.8165161013603	2	576.308406	1150.60226	1.7965	0.0010353	4.3841	0.0025266	6.1805	0.0035619	576.8121788586834	64.287	0.70888	64.616	64.209	64.918	0.32899					40	21	3	0	0	0	0.53525	2	26963	26888;26963		13.906	2.9685	1	929720			43222	2594	21187	21277	49996;49997	49997					0.03298298648792297
YLPEDFIRV	9	Unmodified	_YLPEDFIRV_					0	0	0		ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	ENSG00000134070|ENST00000256458|IRAK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3135864138603	2	576.308406	1150.60226	3.0328	0.0017479	1.6462	0.00094873	4.6791	0.0026966	576.8100074930877	62.292	0.7346	64.25	63.999	64.733	1.9571					50	23	3	0	0	0	0.23535	1	26212	26212		29.082	8.628	1	2007800			43223	2594	21187	21277	49998	49998					0.03298298648792297
YLPELLQTV	9	Unmodified	_YLPELLQTV_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	538.3050414919853	2	538.305332	1074.59611	1.7259	0.00092907	-0.68494	-0.00036871	1.041	0.00056036	538.3050319958096	76.023	0.40884	76.023	75.787	76.196	0					39	12	4	0	0	0	0.10993	1	31599	31599		46.021	18.392	1	8923100			43224	4201	21188	21278	49999	49999					0.0617978041727838
YLPELLQTV	9	Unmodified	_YLPELLQTV_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	538.3037597537041	2	538.305332	1074.59611	2.4728	0.0013311	-0.80593	-0.00043384	1.6668	0.00089727	538.3048356016901	75.558	0.46587	75.879	75.678	76.144	0.32163					46	14	4	0	0	0	0.066815	2	31544	31544;31590		61.357	31.133	1	9759200			43225	4201	21188	21278	50000;50001	50000					0.0617978041727838
YLPELLQTV	9	Unmodified	_YLPELLQTV_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.3069335818291	2	538.305332	1074.59611	3.4439	0.0018538	-0.79046	-0.00042551	2.6534	0.0014283	538.3049383667468	74.485	0.72752	75.803	75.374	76.101	1.318					57	23	3	0	0	0	0.031377	3	31228	31228;31279;31336		85.272	39.572	1	43933000			43226	4201	21188	21278	50002;50003;50004	50002					0.0617978041727838
YLPELLQTV	9	Unmodified	_YLPELLQTV_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.3063842654228	2	538.305332	1074.59611	3.1371	0.0016887	-0.57753	-0.00031089	2.5596	0.0013779	538.305114915804	74.089	0.73489	75.885	75.347	76.082	1.7962					48	23	3	0	0	0	0.057024	4	31043	30998;31043;31094;31140		65.235	25.313	1	40472000			43227	4201	21188	21278	50005;50006;50007;50008	50006					0.0617978041727838
YLPELLQTV	9	Unmodified	_YLPELLQTV_					0	0	0		nc|ENSG00000171617|O14682-2|ENC1;ENSG00000171617|ENST00000302351|ENC1	nc|ENSG00000171617|O14682-2|ENC1	nc|ENSG00000171617|O14682-2|ENC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1075.608569324017	1	1075.60339	1074.59611	3.3303	0.0035821	3.3711	0.003626	6.7014	0.0072081	1075.6049761023874	74.057	0.26988	75.853	75.687	75.957	1.7962					16	8	3	0	0	0	0.019432	1	31070	31070		99.799	43.622	1	5166400			43228	4201	21188	21278	50009	50009					0.0617978041727838
YLPFRIKFK	9	Unmodified	_YLPFRIKFK_					0	0	0		tr|A0A7D6ZF48|A0A7D6ZF48_9CLOTAminotransferaseclassV-foldPLP-dependentenzymeOS=ClostridiumintestinaleOX=36845GN=HZF06_13465PE=4SV=1	tr|A0A7D6ZF48|A0A7D6ZF48_9CLOTAminotransferaseclassV-foldPLP-dependentenzymeOS=ClostridiumintestinaleOX=36845GN=HZF06_13465PE=4SV=1	tr|A0A7D6ZF48|A0A7D6ZF48_9CLOTAminotransferaseclassV-foldPLP-dependentenzymeOS=ClostridiumintestinaleOX=36845GN=HZF06_13465PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2106811404228	2	606.368601	1210.72265	2.1261	0.0012892	-1.1305	-0.00068553	0.99557	0.00060368	606.3664066451304	73.689	0.40144	73.689	73.55	73.952	0					23	12	2	0	0	0	0.11898	1	30654	30654		0.6015	0	1	563160			43229	17059	21189	21279	50010	50010					0.12571751433074496
YLPPLFWRF	9	Unmodified	_YLPPLFWRF_					0	0	0		PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant;nc|ENSG00000110218|Q96RD7-2|PANX1;ENSG00000110218|ENST00000227638|PANX1	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	619.8409911990166	2	619.839677	1237.6648	5.2067	0.0032273	-2.5272	-0.0015665	2.6794	0.0016608	619.8395081915268	88.286	0.48125	89.342	89.113	89.594	1.0562					22	14	3	0	0	0	0.19075	1	37215	37215		34.102	13.649	1	1397600			43230	1701	21190	21280	50011	50011					0.055474895076486064
YLPPLFWRF	9	Unmodified	_YLPPLFWRF_					0	0	0		PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant;nc|ENSG00000110218|Q96RD7-2|PANX1;ENSG00000110218|ENST00000227638|PANX1	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	PANX1|p.L366Pfs*2|1|0.2|ENSG00000110218|chr11:94180153-94180153|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	619.8432494997978	2	619.839677	1237.6648	4.3257	0.0026812	-1.8376	-0.001139	2.4881	0.0015422	619.8386550610901	87.793	0.3844	89.288	89.173	89.557	1.4953					21	11	3	0	0	0	0.19075	1	37045	37045		34.102	20.196	1	1155600			43231	1701	21190	21280	50012	50012					0.055474895076486064
YLPRRNRA	8	Unmodified	_YLPRRNRA_					0	0	0		ENST00000369776.8_1_X:153640293-153648389:+|nuORF	ENST00000369776.8_1_X:153640293-153648389:+|nuORF	ENST00000369776.8_1_X:153640293-153648389:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3049804568291	2	523.304324	1044.5941	1.6925	0.00088571	-1.6361	-0.0008562	0.056397	2.9513E-05	523.303552086807	68.689	1.446	70.542	69.657	71.103	1.853					108	46	3	0	0	0	0.88958	1	28685	28685		2.8892	0	1	7991600			43232	6100	21191	21281	50013	50013					0.0735820924271593
YLPYPIHQV	9	Unmodified	_YLPYPIHQV_					0	0	0		ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2;ENSG00000176444|ENST00000368361|CLK2	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	565.3082153201103	2	565.305667	1128.59678	1.5109	0.00085413	1.6793	0.0009493	3.1902	0.0018034	565.306812448433	44.866	0.27971	44.866	44.748	45.028	0					13	8	2	0	0	0	0.49082	2	18818	18766;18818		15.847	5.0233	1	570220			43233	4410	21192	21282	50014;50015	50015					0.03762619856979654
YLPYPIHQV	9	Unmodified	_YLPYPIHQV_					0	0	0		ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2;ENSG00000176444|ENST00000368361|CLK2	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3072997927666	2	565.305667	1128.59678	1.7066	0.00096475	1.651	0.00093331	3.3576	0.0018981	565.3067309099545	42.853	0.40942	44.193	43.953	44.362	1.3399					22	12	2	0	0	0	0.37357	2	17945	17945;17997		21.747	5.8995	1	1663700			43234	4410	21192	21282	50016;50017	50016					0.03762619856979654
YLPYPIHQV	9	Unmodified	_YLPYPIHQV_					0	0	0		ENST00000497188.1_1_1:155234069-155238352:-|nuORF;nc|ENSG00000176444|P49760-3|CLK2;ENSG00000176444|ENST00000368361|CLK2	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	ENST00000497188.1_1_1:155234069-155238352:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3085815310478	2	565.305667	1128.59678	1.7038	0.00096318	0.60473	0.00034186	2.3086	0.001305	565.3064889389775	42.276	0.37304	44.197	44.011	44.384	1.9211					27	11	3	0	0	0	0.19075	2	17703	17703;17759		34.102	18.255	1	1255900			43235	4410	21192	21282	50018;50019	50018					0.03762619856979654
YLQERINYI	9	Unmodified	_YLQERINYI_					0	0	0			REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	REV__tr|A0A553SJA2|A0A553SJA2_NIACIABCtransporterATP-bindingproteinOS=NialliacirculansOX=1397GN=CEQ21_16385PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	404.5550109744072	3	404.552151	1210.63462	2.0621	0.00083424	1.8169	0.00073503	3.879	0.0015693	404.5527868613331	65.808	0.79084	66.132	65.862	66.653	0.32449					45	24	2	0	0	0	0.80869	1	27655	27655		2.9952	0	1	899190	+		43236	14893	21193	21283	50020	50020					0.037730860518195186
YLQKTILP	8	Unmodified	_YLQKTILP_					0	0	0			REV__ENSG00000097096|ENST00000341460|SYDE2	REV__ENSG00000097096|ENST00000341460|SYDE2	MSMS	GG20161007_CRH_Patient100_A02_02	2	488.2990295290947	2	488.29731	974.580068	NaN	NaN	NaN	NaN	NaN	NaN	NaN	39.706	1	40.019	39.519	40.519	0.31263								0	0	0	1.0178	1	16696	16696		0.79363	0	1		+		43237	8941	21194	21284	50021	50021					0.09176118971060987
YLQKTREDL	9	Unmodified	_YLQKTREDL_					0	0	0		ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.8157836794853	2	583.31422	1164.61389	1.2583	0.00073396	-2.4472	-0.0014275	-1.1889	-0.00069353	583.3116973927425	50.808	0.36003	52.201	52.047	52.407	1.3938					29	11	4	0	0	0	0.12251	1	21268	21268		41.84	1.8899	1	9832600			43238	6792	21195	21285	50022	50022					0.03816495672140263
YLQKTREDL	9	Unmodified	_YLQKTREDL_					0	0	0		ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	ENST00000477797.1_1_7:143947564-143947660:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.8163940310478	2	583.31422	1164.61389	1.3942	0.00081323	-2.1119	-0.0012319	-0.71773	-0.00041866	583.3117834294231	50.279	0.38754	52.256	52.039	52.427	1.9772					36	12	4	0	0	0	0.12251	1	21038	21038		41.84	3.8656	1	10434000			43239	6792	21195	21285	50023	50023					0.03816495672140263
YLQLHSLASLA	11	Unmodified	_YLQLHSLASLA_					0	0	0			REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.3433105349541	2	608.340238	1214.66592	3.2485	0.0019762	1.1942	0.00072649	4.4427	0.0027027	608.3405307758301	94.521	0.30674	95.71	95.527	95.834	1.1887					18	9	3	0	0	0	0.42228	1	39771	39771		26.268	2.4784	1	1560100	+		43240	10856	21196	21286	50024	50024					0.06717659085916239
YLQLHSLASLA	11	Unmodified	_YLQLHSLASLA_					0	0	0			REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	608.340238	1214.66592	4.041	0.0024583	0.99731	0.0006067	5.0384	0.003065	608.8426119569392	94.959	0.27789	95.7	95.519	95.796	0.74123	-0.0048754	-0.00010375	NaN	26.268	15	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	754400	+		43241	10856	21196	21286							0.06717659085916239
YLQLHSLASLA	11	Unmodified	_YLQLHSLASLA_					0	0	0			REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	REV__ISLR2|p.A371Gfs*24|1|0.33|ENSG00000167178|chr15:74133864-74133868|GGCGG/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	608.340238	1214.66592	3.2485	0.0019762	1.1942	0.00072649	4.4427	0.0027027	608.3405307758301	94.521	0.30674	95.71	95.527	95.834	1.1887	0.0048754	0.00013583	NaN	26.268	18	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1560100	+		43242	10856	21196	21286							0.06717659085916239
YLQLLVVIF	9	Unmodified	_YLQLLVVIF_					0	0	0		nc|ENSG00000108344|O43242-2|PSMD3;ENST00000415039.7_1_17:38140716-38152959:+|nuORF;ENSG00000108344|ENST00000264639|PSMD3	nc|ENSG00000108344|O43242-2|PSMD3	nc|ENSG00000108344|O43242-2|PSMD3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	554.3109619021416	2	554.344261	1106.67397	2.9331	0.0016259	2.3792	0.0013189	5.3122	0.0029448	554.3458689583373	74.082	0.42455	75.878	75.627	76.051	1.7962					26	13	3	0	0	0	0.11463	1	31124	31124		12.532	0	1	1047300			43243	1630	21197	21287	50025	50025					0.12489838073338433
YLQPKLLGI	9	Unmodified	_YLQPKLLGI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	522.8281738162041	2	522.826235	1043.63792	2.5414	0.0013287	0.62843	0.00032856	3.1698	0.0016573	522.8264694072499	57.804	0.28644	58.127	57.917	58.204	0.32298					12	8	2	0	0	0	0.22519	1	24201	24201		30.225	12.09	1	734600			43244	4351	21198	21288	50026	50026					0.11784380896460789
YLQPKLLGI	9	Unmodified	_YLQPKLLGI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	522.8279907107353	2	522.826235	1043.63792	1.2698	0.00066386	0.85374	0.00044636	2.1235	0.0011102	522.8265444782563	56.555	0.33882	57.97	57.784	58.123	1.4145					20	10	3	0	0	0	0.059546	1	23702	23702		64.236	24.279	1	2393900			43245	4351	21198	21288	50027	50027					0.11784380896460789
YLQPKLLGI	9	Unmodified	_YLQPKLLGI_					0	0	0		nc|ENSG00000175054|Q13535-2|ATR;nc|ENSG00000175054|Q13535-3|ATR;ENSG00000175054|ENST00000350721|ATR;ATR|p.D1429Afs*26|1|0.04|ENSG00000175054|chr3:142519765-142519765|T/-|frameshift_variant	nc|ENSG00000175054|Q13535-2|ATR	nc|ENSG00000175054|Q13535-2|ATR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	522.8271362185478	2	522.826235	1043.63792	1.0166	0.0005315	0.36764	0.00019221	1.3842	0.00072371	522.8266620720151	55.969	0.2462	57.938	57.841	58.087	1.9684					13	7	2	0	0	0	0.09539	1	23459	23459		50.855	23.971	1	2134300			43246	4351	21198	21288	50028	50028					0.11784380896460789
YLQPTDENAL	10	Unmodified	_YLQPTDENAL_					0	0	0			REV__SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant	REV__SF3B3|p.K976Dfs*14|1|0.12|ENSG00000189091|chr16:70567509-70567510|-/GACTATTTTACCATAATTTTTA|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2844726443291	2	582.282586	1162.55062	2.6614	0.0015497	1.2011	0.00069941	3.8626	0.0022491	582.283043483377	75.373	0.36986	77.155	76.978	77.347	1.7817					29	11	3	0	0	0	0.40874	1	31647	31647		32.786	0	1	5198600	+		43247	11603	21199	21289	50029	50029					-0.02415489835743756
YLQQHINLH	9	Unmodified	_YLQQHINLH_					0	0	0		nc|ENSG00000174792|Q17RF5-2|ODAPH	nc|ENSG00000174792|Q17RF5-2|ODAPH	nc|ENSG00000174792|Q17RF5-2|ODAPH	MSMS	GG20161007_CRH_Patient100_W632_01	3	583.3091308474541	2	583.309272	1164.60399	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.935	1	48.317	47.817	48.817	1.3825								0	0	0	0.35192	1	19656	19656		13.508	3.3245	1				43248	7933	21200	21290	50030	50030					0.028273524574160547
YLQVDLQRL	9	Unmodified	_YLQVDLQRL_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;chr6:30881125-30884538|402|13.13|0.42|4.95|+|ENST00000505534|DDR1,DDR1;chr6:30884145-30888711|410|12.74|0.66|4.28|+|ENST00000504927|DDR1,DDR1;DDR1|p.M159Wfs*16|1|0.17|ENSG00000204580|chr6:30891021-30891021|G/-|frameshift_variant;chr6:30885811-30888688|382|14.91|0.25|5.9|+|ENST00000503495|DDR1,DDR1;nc|ENSG00000204580|Q08345-4|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	574.3295165896416	2	574.327131	1146.63971	1.7461	0.0010028	0.93161	0.00053505	2.6777	0.0015379	574.3280738104976	54.741	0.25964	54.741	54.563	54.823	0					13	7	2	0	0	0	0.093059	1	22790	22790		51.63	15.503	1	862420			43249	5149	21201	21291	50031	50031					0.07225389914401603
YLQVDLQRL	9	Unmodified	_YLQVDLQRL_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;chr6:30881125-30884538|402|13.13|0.42|4.95|+|ENST00000505534|DDR1,DDR1;chr6:30884145-30888711|410|12.74|0.66|4.28|+|ENST00000504927|DDR1,DDR1;DDR1|p.M159Wfs*16|1|0.17|ENSG00000204580|chr6:30891021-30891021|G/-|frameshift_variant;chr6:30885811-30888688|382|14.91|0.25|5.9|+|ENST00000503495|DDR1,DDR1;nc|ENSG00000204580|Q08345-4|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	574.3296996951103	2	574.327131	1146.63971	1.7903	0.0010282	0.81925	0.00047052	2.6096	0.0014988	574.3275585501292	54.063	0.25433	54.384	54.254	54.508	0.32088					14	7	2	0	0	0	0.11669	1	22644	22644		43.772	13.548	1	855320			43250	5149	21201	21291	50032	50032					0.07225389914401603
YLQVDLQRL	9	Unmodified	_YLQVDLQRL_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;chr6:30881125-30884538|402|13.13|0.42|4.95|+|ENST00000505534|DDR1,DDR1;chr6:30884145-30888711|410|12.74|0.66|4.28|+|ENST00000504927|DDR1,DDR1;DDR1|p.M159Wfs*16|1|0.17|ENSG00000204580|chr6:30891021-30891021|G/-|frameshift_variant;chr6:30885811-30888688|382|14.91|0.25|5.9|+|ENST00000503495|DDR1,DDR1;nc|ENSG00000204580|Q08345-4|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3304321169853	2	574.327131	1146.63971	0.75152	0.00043162	2.2794	0.0013091	3.0309	0.0017407	574.3284392656626	52.915	0.38457	54.315	54.089	54.473	1.4005					25	11	3	0	0	0	0.04812	2	22115	22115;22159		69.105	29.155	1	4568400			43251	5149	21201	21291	50033;50034	50033					0.07225389914401603
YLQVDLQRL	9	Unmodified	_YLQVDLQRL_					0	0	0		nc|ENSG00000204580|Q08345-2|DDR1;nc|ENSG00000204580|Q08345-6|DDR1;ENSG00000204580|ENST00000376568|DDR1;nc|ENSG00000204580|Q08345-5|DDR1;chr6:30881125-30884538|402|13.13|0.42|4.95|+|ENST00000505534|DDR1,DDR1;chr6:30884145-30888711|410|12.74|0.66|4.28|+|ENST00000504927|DDR1,DDR1;DDR1|p.M159Wfs*16|1|0.17|ENSG00000204580|chr6:30891021-30891021|G/-|frameshift_variant;chr6:30885811-30888688|382|14.91|0.25|5.9|+|ENST00000503495|DDR1,DDR1;nc|ENSG00000204580|Q08345-4|DDR1;ENST00000431373.1_1_6:30853540-30859007:+|nuORF	nc|ENSG00000204580|Q08345-2|DDR1	nc|ENSG00000204580|Q08345-2|DDR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3280517458916	2	574.327131	1146.63971	1.3248	0.00076089	0.01298	7.4547E-06	1.3378	0.00076834	574.3270303604802	52.281	0.31017	54.254	54.138	54.448	1.9722					24	9	3	0	0	0	0.04812	2	21897	21897;21946		69.105	31.131	1	3943300			43252	5149	21201	21291	50035;50036	50035					0.07225389914401603
YLRDGYCDL	9	Unmodified	_YLRDGYCDL_					0	0	0			REV__tr|A0A7D6VQ46|A0A7D6VQ46_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01345PE=4SV=1	REV__tr|A0A7D6VQ46|A0A7D6VQ46_9CLOTGNATfamilyN-acetyltransferaseOS=ClostridiumintestinaleOX=36845GN=HZF06_01345PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.2546264529228	2	559.252774	1116.491	2.0907	0.0011692	-0.073685	-4.1208E-05	2.017	0.001128	559.2526062795412	82.129	0.40022	82.41	82.182	82.582	0.2802					32	12	4	0	0	0	0.75267	1	34301	34301		5.2307	0	1	2107100	+		43253	15372	21202	21292	50037	50037					-0.06259084050793717
YLRDIDLI	8	Unmodified	_YLRDIDLI_					0	0	0		ENST00000517666.5_1_8:124333376-124408650:-|nuORF;ENSG00000156802|ENST00000287394|ATAD2	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	ENST00000517666.5_1_8:124333376-124408650:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	511.2883788943291	2	510.78985	1019.56515	2.0964	0.0010708	-3.5377	-0.001807	-1.4413	-0.0007362	511.2883352540616	49.149	0.68213	51.126	50.73	51.412	1.9772					47	21	3	0	0	0	0.86202	1	20525	20525		15.768	3.2367	1	4078800			43254	3457	21203	21293	50038	50038					0.056146271030456774
YLRHFFHRHLL	11	Unmodified	_YLRHFFHRHLL_					0	0	0		ENSG00000183625|ENST00000395940|CCR3;nc|ENSG00000183625|P51677-2|CCR3	ENSG00000183625|ENST00000395940|CCR3	ENSG00000183625|ENST00000395940|CCR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	513.6225463747978	3	513.621233	1537.84187	2.0912	0.0010741	-0.020575	-1.0568E-05	2.0707	0.0010635	513.6210703515651	44.365	1.6546	44.365	44.131	45.786	0					94	52	4	0	0	0	1.0365	2	18948	18897;18948		1.2148	0.76031	1	7445100			43255	4658	21204	21294	50039;50040	50040					0.09446338110524266
YLRHFFHRHLL	11	Unmodified	_YLRHFFHRHLL_					0	0	0		ENSG00000183625|ENST00000395940|CCR3;nc|ENSG00000183625|P51677-2|CCR3	ENSG00000183625|ENST00000395940|CCR3	ENSG00000183625|ENST00000395940|CCR3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	513.6223022341728	3	513.621233	1537.84187	1.9293	0.00099092	0.25219	0.00012953	2.1815	0.0011204	513.6211643377723	43.684	1.9514	44.008	43.739	45.69	0.32389					127	64	4	0	0	0	1.0362	1	18920	18920		1.3296	0.82369	1	9343200			43256	4658	21204	21294	50041	50041					0.09446338110524266
YLRKGKRG	8	Unmodified	_YLRKGKRG_					0	0	0			REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	977.6017944216728	1	977.600309	976.593033	1.1967	0.0011699	0.7916	0.00077386	1.9883	0.0019437	977.6009521523347	107.69	0.18419	107.69	107.6	107.79	0					27	9	4	0	0	0	0.89198	1	46212	46212		0	0	1	221950000	+		43257	15198	21205	21295	50042	50042					0.10379994873812848
YLRKGKRG	8	Unmodified	_YLRKGKRG_					0	0	0			REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	977.600309	976.593033	1.1967	0.0011699	0.7916	0.00077386	1.9883	0.0019437	977.6009521523347	107.69	0.18419	107.69	107.6	107.79	0	-0.024847	0.00063722	NaN	0	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	221950000	+		43258	15198	21205	21295							0.10379994873812848
YLRKGKRG	8	Unmodified	_YLRKGKRG_					0	0	0			REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	REV__tr|A0A553SS77|A0A553SS77_NIACITrmBfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_02595PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	977.600309	976.593033	2.8095	0.0027465	-0.76998	-0.00075273	2.0395	0.0019938	977.5992743235495	107.69	0.1835	107.74	107.62	107.8	0.052452	0.024847	-0.00088938	NaN	0	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	207360000	+		43259	15198	21205	21295							0.10379994873812848
YLRRPYNPQHL	11	Unmodified	_YLRRPYNPQHL_					0	0	0			REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|88|2|sense	REV__HERVH48-int_dup24|chr4:19887557-19893979:+|2.177795351046405|0.1078513195373675|4.34|428.0|88|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	728.8921386599541	2	728.894035	1455.77352	1.1668	0.00085045	-0.95487	-0.000696	0.21191	0.00015446	728.8927078120593	54.561	0.35003	56.53	56.318	56.668	1.9684					27	11	3	0	0	0	0.98969	1	22900	22900		8.7454	1.1365	1	2436200	+		43260	14208	21206	21296	50043	50043					0.06386048739977923
YLRTLQELI	9	Unmodified	_YLRTLQELI_					0	0	0			REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	575.3387939333916	2	574.837331	1147.66011	1.1241	0.00064616	1.4749	0.00084784	2.599	0.001494	574.838330146699	57.218	0.25626	58.633	58.462	58.718	1.4145					12	8	2	0	0	0	0.22154	1	23973	23973		30.637	1.555	1	2159600	+		43261	11099	21207	21297	50044	50044					0.0921856057423156
YLRTLQELI	9	Unmodified	_YLRTLQELI_					0	0	0			REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8397094607353	2	574.837331	1147.66011	0.93053	0.0005349	0.59773	0.0003436	1.5283	0.0008785	574.8378512781684	56.609	0.20591	58.577	58.456	58.662	1.9684					12	6	2	0	0	0	0.073578	1	23734	23734		58.679	10.93	1	2125100	+		43262	11099	21207	21297	50045	50045					0.0921856057423156
YLRTLQELI	9	Unmodified	_YLRTLQELI_					0	0	0			REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	574.837331	1147.66011	1.1241	0.00064616	1.4749	0.00084784	2.599	0.001494	574.838330146699	57.218	0.25626	58.633	58.462	58.718	1.4145	0.027924	0.00076609	NaN	58.679	12	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2159600	+		43263	11099	21207	21297							0.0921856057423156
YLRTLQELI	9	Unmodified	_YLRTLQELI_					0	0	0			REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	REV__ENST00000509033.1_1_4:140036086-140036467:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	574.837331	1147.66011	0.93053	0.0005349	0.59773	0.0003436	1.5283	0.0008785	574.8378512781684	56.609	0.20591	58.577	58.456	58.662	1.9684	-0.027924	-0.00024239	NaN	58.679	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2125100	+		43264	11099	21207	21297							0.0921856057423156
YLRVMWLF	8	Unmodified	_YLRVMWLF_					0	0	0			REV__sp|P09721|US12_HCMVAUncharacterizedproteinHVLF6OS=Humancytomegalovirus(strainAD169)OX=10360GN=US12PE=3SV=1	REV__sp|P09721|US12_HCMVAUncharacterizedproteinHVLF6OS=Humancytomegalovirus(strainAD169)OX=10360GN=US12PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3094360232353	2	564.307155	1126.59976	0.82343	0.00046467	3.3508	0.0018909	4.1742	0.0023555	564.3092711410462	51.669	0.31114	53.641	53.488	53.799	1.9722					19	9	3	0	0	0	0.80889	1	21697	21697		26.341	8.2063	1	1685900	+		43265	14643	21208	21298	50046	50046					0.04152171710143193
YLSCWCLLL	9	Unmodified	_YLSCWCLLL_					0	0	0			REV__ENST00000417811.2_3_7:32763128-32763203:-|nuORF	REV__ENST00000417811.2_3_7:32763128-32763203:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	371.1018859744072	3	371.853896	1112.53986	2.6984	0.0010034	0.89758	0.00033377	3.596	0.0013372	371.8545043004847	74.025	0.3634	75.821	75.657	76.021	1.7962					28	11	3	0	0	0	0.11938	1	31097	31097		1.1933	0	1	1822300	+		43266	12955	21209	21299	50047	50047					-0.011908870153774842
YLSDDSFVIF	10	Unmodified	_YLSDDSFVIF_					0	0	0			REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|276|2|anti-sense	REV__L1PA6_dup2301|chr6:12139363-12145531:+|1.565126959046357|0.4276956720776814|1.87|429.0|276|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	603.2899047732353	2	603.289879	1204.56521	1.8753	0.0011314	0.61038	0.00036824	2.4857	0.0014996	603.2900988597015	43.488	0.45267	44.841	44.648	45.1	1.3536					49	14	5	0	0	0	0.75645	1	18319	18319		15.847	0	1	25163000	+		43267	14315	21210	21300	50048	50048					-0.028894176876065103
YLSFGKFQL	9	Unmodified	_YLSFGKFQL_					0	0	0			REV__ENST00000475108.5_1_1:65886272-65897612:+|nuORF	REV__ENST00000475108.5_1_1:65886272-65897612:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.8074828982353	2	551.800217	1101.58588	1.8745	0.0010344	2.6901	0.0014844	4.5646	0.0025188	551.8012841069506	68.949	0.61746	70.314	69.997	70.614	1.3657					59	19	4	0	0	0	0.5697	1	28944	28944		12.532	1.7076	1	4414200	+		43268	13312	21211	21301	50049	50049					0.03915217482722255
YLSLIAKSV	9	Unmodified	_YLSLIAKSV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	497.3035461306572	2	497.302593	992.590633	2.5507	0.0012685	-0.82088	-0.00040823	1.7299	0.00086026	497.3023653279332	44.604	0.22023	45.97	45.836	46.056	1.3653					12	6	2	0	0	0	0.11669	1	18692	18692		43.772	19.752	1	1011700			43269	727	21212	21302	50050	50050					0.09404101625477779
YLSLIAKSV	9	Unmodified	_YLSLIAKSV_					0	0	0		ENST00000552612.5_1_12:32974244-32977059:-|nuORF;ENSG00000057294|ENST00000340811|PKP2;nc|ENSG00000057294|Q99959|PKP2	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	ENST00000552612.5_1_12:32974244-32977059:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	497.3036376833916	2	497.302593	992.590633	2.1421	0.0010653	0.083992	4.177E-05	2.2261	0.001107	497.3026305267024	43.965	0.25445	45.909	45.767	46.021	1.9438					13	7	2	0	0	0	0.25667	1	18419	18419		27.629	3.6082	1	667310			43270	727	21212	21302	50051	50051					0.09404101625477779
YLSNHNYVHR	10	Unmodified	_YLSNHNYVHR_					0	0	0		ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828613162041	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.562	1	12.323	11.823	12.823	0.76165								0	0	0	0.66222	1	4801	4801		0.69767	0	1				43271	3168	21213	21303	50052	50052					-0.012230481449705621
YLSNHNYVHR	10	Unmodified	_YLSNHNYVHR_					0	0	0		ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	ENSG00000146904|ENST00000275815|EPHA1	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8825561404228	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.773	1	12.561	12.061	13.061	0.78751								0	0	0	0.66222	1	4888	4888		0.69767	0	1				43272	3168	21213	21303	50053	50053					-0.012230481449705621
YLSPKLWAL	9	Unmodified	_YLSPKLWAL_					0	0	0		ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	545.8214599490166	2	545.81841	1089.62227	1.4218	0.00077605	-0.14173	-7.736E-05	1.2801	0.0006987	545.8183871839694	67.119	0.33062	67.119	66.957	67.288	0					18	10	2	0	0	0	0.27148	1	27943	27943		26.884	12.045	1	1358600			43273	3884	21214	21304	50054	50054					0.08104094379405069
YLSPKLWAL	9	Unmodified	_YLSPKLWAL_					0	0	0		ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	545.8192016482353	2	545.81841	1089.62227	1.8998	0.0010369	1.0957	0.00059806	2.9955	0.001635	545.8188306626317	66.58	0.31412	66.905	66.718	67.032	0.32449					16	9	2	0	0	0	0.27148	1	27862	27862		26.884	10.735	1	966950			43274	3884	21214	21304	50055	50055					0.08104094379405069
YLSPKLWAL	9	Unmodified	_YLSPKLWAL_					0	0	0		ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	545.8210327029228	2	545.81841	1089.62227	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.246	1	66.645	66.145	67.145	1.3989								0	0	0	0.082379	1	27363	27363		37.974	13.3	1				43275	3884	21214	21304	50056	50056					0.08104094379405069
YLSPKLWAL	9	Unmodified	_YLSPKLWAL_					0	0	0		ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	ENSG00000166173|ENST00000299213|LARP6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.8197509646416	2	545.81841	1089.62227	1.8866	0.0010297	-0.43234	-0.00023598	1.4543	0.00079376	545.8189157313861	64.704	0.38066	66.632	66.422	66.803	1.928					17	11	2	0	0	0	0.12251	1	27176	27176		41.84	11.615	1	2516900			43276	3884	21214	21304	50057	50057					0.08104094379405069
YLSSMVGLIL	10	Unmodified	_YLSSMVGLIL_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3108398318291	2	548.309561	1094.60457	2.1787	0.0011946	0.79343	0.00043504	2.9721	0.0016296	548.3095972231085	65.717	0.39926	67.116	66.91	67.31	1.3989					28	12	3	0	0	0	0.068389	1	27518	27518		71.134	6.8973	1	14989000			43277	5119	21215	21305	50058	50058					0.06105011062277299
YLSSMVGLIL	10	Unmodified	_YLSSMVGLIL_					0	0	0		nc|ENSG00000203880|Q9NV79-2|PCMTD2;ENSG00000203880|ENST00000308824|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	nc|ENSG00000203880|Q9NV79-2|PCMTD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3105956912041	2	548.309561	1094.60457	1.7724	0.00097182	1.0414	0.000571	2.8138	0.0015428	548.3099219849918	65.255	0.37535	67.164	66.969	67.344	1.9085					30	11	4	0	0	0	0.15278	1	27329	27329		54.774	1.198	1	13709000			43278	5119	21215	21305	50059	50059					0.06105011062277299
YLSVKIWDL	9	Unmodified	_YLSVKIWDL_					0	0	0		ENST00000517754.1_1_8:26221160-26227926:+|nuORF;ENSG00000221914|ENST00000380737|PPP2R2A;nc|ENSG00000221914|P63151-2|PPP2R2A	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	ENST00000517754.1_1_8:26221160-26227926:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	568.8219482302666	2	568.82115	1135.62775	1.4764	0.00083984	2.5271	0.0014375	4.0036	0.0022773	568.8217806808942	73.277	0.18716	73.277	73.216	73.403	0					8	5	2	0	0	0	0.37774	1	30512	30512		21.537	6.6987	1	1179000			43279	5273	21216	21306	50060	50060					0.06535773171253823
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1064.591723620892	1	1064.5874	1063.58013	2.2272	0.002371	0.13726	0.00014612	2.3644	0.0025171	1064.587318978171	82.6	0.36893	82.6	82.4	82.769	0					23	11	3	0	0	0	0.022807	3	34418	34372;34418;34474		97.075	12.044	1	4374200			43280	4864	21217	21307	50061;50062;50063	50062					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	532.7982055544853	2	532.79734	1063.58013	2.2617	0.001205	-0.45688	-0.00024342	1.8048	0.00096159	532.7968907351805	82.07	0.43118	82.35	82.182	82.613	0.2802					34	13	3	0	0	0	0.0082953	1	34321	34321		109.63	42.285	1	5975400			43281	4864	21217	21307	50064	50064					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1064.588183581829	1	1064.5874	1063.58013	2.8137	0.0029954	0.92237	0.00098195	3.7361	0.0039774	1064.5879460076922	82.129	0.36926	82.409	82.182	82.551	0.2802					27	11	3	0	0	0	0.031324	2	34323	34323;34375		85.357	21.12	1	3445600			43282	4864	21217	21307	50065;50066	50065					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1064.592333972454	1	1064.5874	1063.58013	3.7004	0.0039394	1.6461	0.0017525	5.3465	0.0056918	1064.5877590743266	81.098	0.3714	82.331	82.161	82.533	1.2332					29	11	4	0	0	0	0.022807	2	34065	34016;34065		97.075	22.652	1	8394100			43283	4864	21217	21307	50067;50068	50068					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	532.8018676638603	2	532.79734	1063.58013	3.171	0.0016895	1.4599	0.00077781	4.6308	0.0024673	532.7982842570444	81.131	0.58479	82.364	82.102	82.687	1.2332					34	18	3	0	0	0	0.028763	2	34026	34026;34074		89.427	22.083	1	15345000			43284	4864	21217	21307	50069;50070	50069					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1064.592578113079	1	1064.5874	1063.58013	2.6574	0.002829	3.1439	0.003347	5.8013	0.006176	1064.5889824056126	80.714	0.3684	82.41	82.21	82.578	1.6959					29	11	3	0	0	0	0.006164	2	33828	33828;33877		117.6	32.242	1	9457700			43285	4864	21217	21307	50071;50072	50071					0.05088074180366675
YLTAEILEL	9	Unmodified	_YLTAEILEL_					0	0	0		ENSG00000188486|ENST00000530167|H2AX;ENSG00000196866|ENST00000341023|H2AC7;ENSG00000184270|ENST00000331128|H2AC21;nc|ENSG00000246705|Q9BTM1-2|H2AJ;ENSG00000164508|ENST00000297012|H2AC1;nc|ENSG00000288859|Q6FI13|H2AC18;ENSG00000278677|ENST00000359611|H2AC17;ENSG00000278463|ENST00000615868|H2AC4;ENSG00000277075|ENST00000303910|H2AC8;ENSG00000196787|ENST00000359193|H2AC11;ENSG00000196747|ENST00000358739|H2AC13;ENSG00000181218|ENST00000689584|H2AC25;ENSG00000180573|ENST00000377791|H2AC6;ENSG00000276903|ENST00000613174|H2AC16;ENSG00000246705|ENST00000544848|H2AJ;ENSG00000184260|ENST00000331380|H2AC20;ENSG00000276368|ENST00000333151|H2AC14;ENSG00000274997|ENST00000377459|H2AC12;ENST00000513210.5_1_5:134695623-134724711:-|nuORF;nc|ENSG00000113648|O75367|MACROH2A1;nc|ENSG00000113648|O75367-3|MACROH2A1;ENST00000360597.8_1_5:134681666-134724783:-|nuORF;HIST1H2AH|p.L56M|1|0.1|ENSG00000274997|chr6:27147294-27147294|C/A|missense_variant;ENST00000506532.5_1_5:134705062-134724783:-|nuORF;ENST00000479986.1_1_6:27858584-27860837:-|nuORF;ENSG00000113648|ENST00000511689|MACROH2A1	ENSG00000188486|ENST00000530167|H2AX	ENSG00000188486|ENST00000530167|H2AX	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	532.8004638552666	2	532.79734	1063.58013	2.3174	0.0012347	2.2152	0.0011803	4.5326	0.002415	532.7987760032572	80.696	0.42985	82.392	82.18	82.61	1.6959					23	13	3	0	0	0	0.046276	1	33841	33841		70.716	19.86	1	7911100			43286	4864	21217	21307	50073	50073					0.05088074180366675
YLTAEVLEL	9	Unmodified	_YLTAEVLEL_					0	0	0		nc|ENSG00000105968|Q71UI9-2|H2AZ2;ENSG00000164032|ENST00000296417|H2AZ1;ENSG00000105968|ENST00000308153|H2AZ2;ENST00000511319.5_1_4:100869621-100871200:-|nuORF;nc|ENSG00000105968|Q71UI9-4|H2AZ2;ENST00000511203.1_1_4:100869836-100870579:-|nuORF	nc|ENSG00000105968|Q71UI9-2|H2AZ2	nc|ENSG00000105968|Q71UI9-2|H2AZ2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1050.575732409954	1	1050.57175	1049.56448	3.7436	0.0039329	0.89368	0.00093888	4.6372	0.0048717	1050.5724390660405	73.605	0.27963	75.402	75.224	75.503	1.7962					15	8	3	0	0	0	0.051699	1	30894	30894		67.344	25.249	1	1385100			43287	1550	21218	21308	50074	50074					0.041677876633457345
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1051.568652331829	1	1051.567	1050.55973	1.6183	0.0017017	-0.61071	-0.0006422	1.0076	0.0010595	1051.566389826381	70.012	0.28311	70.012	69.866	70.149	0					12	8	2	0	0	0	0.19075	1	29172	29172		34.102	13.649	1	532900			43288	699	21219	21309	50075	50075					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.2869140505791	2	526.28714	1050.55973	1.714	0.00090204	-1.2144	-0.00063914	0.49952	0.00026289	526.285875413461	70.046	0.34463	70.046	69.866	70.21	0					15	10	2	0	0	0	0.66839	1	29200	29200		8.5933	0	1	533450			43289	699	21219	21309	50076	50076					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1051.579882800579	1	1051.567	1050.55973	1.8963	0.0019941	0.81015	0.00085192	2.7064	0.002846	1051.5699980447778	69.647	0.28239	69.969	69.784	70.066	0.32223					12	8	2	0	0	0	0.023786	1	29142	29142		96.285	37.606	1	506270			43290	699	21219	21309	50077	50077					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1051.568774402142	1	1051.567	1050.55973	2.3374	0.0024579	-0.097443	-0.00010247	2.2399	0.0023554	1051.568548816941	68.561	0.36759	69.926	69.754	70.122	1.3657					23	11	3	0	0	0	0.0092758	1	28764	28764		108	36.075	1	1885100			43291	699	21219	21309	50078	50078					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MSMS	GG20161007_CRH_Patient100_W632_01	3	526.2875244021416	2	526.28714	1050.55973	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.609	1	69.974	69.474	70.474	1.3657								0	0	0	0.072365	1	28791	28791		39.957	9.3208	1				43292	699	21219	21309	50079	50079					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2874633669853	2	526.28714	1050.55973	2.4041	0.0012653	-0.004367	-2.2983E-06	2.3997	0.001263	526.2860726073006	68.029	0.43115	69.899	69.674	70.105	1.87					25	13	3	0	0	0	0.12174	1	28539	28539		42.095	16.695	1	3207400			43293	699	21219	21309	50080	50080					0.03646903520575506
YLTDLQVSL	9	Unmodified	_YLTDLQVSL_					0	0	0		ENSG00000050344|ENST00000056233|NFE2L3;ENST00000588207.1_1_18:57637691-57638603:+|nuORF;ENST00000606261.1_1_7:26224125-26225400:+|nuORF	ENSG00000050344|ENST00000056233|NFE2L3	ENSG00000050344|ENST00000056233|NFE2L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1051.569262683392	1	1051.567	1050.55973	3.2346	0.0034014	2.0384	0.0021436	5.2731	0.005545	1051.5669646051724	68.063	0.33828	69.933	69.767	70.105	1.87					17	10	2	0	0	0	0.04145	1	28583	28583		74.929	21.096	1	1502600			43294	699	21219	21309	50081	50081					0.03646903520575506
YLTEPVDEHCI	11	Unmodified	_YLTEPVDEHCI_					0	0	0		ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.3015624880791	2	659.802828	1317.5911	0.62822	0.0004145	-3.7727	-0.0024893	-3.1445	-0.0020748	659.8006920075828	52.905	0.22613	54.305	54.184	54.41	1.4005					11	6	2	0	0	0	0.89563	1	22141	22141		10.074	1.3285	1	590780			43295	6401	21220	21310	50082	50082					-0.054988915076137346
YLTEPVDEHCI	11	Unmodified	_YLTEPVDEHCI_					0	0	0		ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	659.802828	1317.5911	1.8141	0.0011969	-6.4609	-0.0042629	-4.6469	-0.003066	659.7979708832347	54.005	0.25124	54.325	54.16	54.411	0.32088	0.043236	-0.0022583	NaN	10.074	14	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	614450			43296	6401	21220	21310							-0.054988915076137346
YLTEPVDEHCI	11	Unmodified	_YLTEPVDEHCI_					0	0	0		ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	ENST00000415545.2_1_1:92108345-92109332:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	659.802828	1317.5911	1.2115	0.00079934	-5.3246	-0.0035132	-4.1131	-0.0027138	659.7996462903999	52.244	0.21688	54.216	54.168	54.385	1.9722	-0.066396	-0.00075877	NaN	10.074	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	734990			43297	6401	21220	21310							-0.054988915076137346
YLTEYSDIQ	9	Unmodified	_YLTEYSDIQ_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	378.1238586306572	3	377.845	1130.51317	-0.32482	-0.00012273	2.3033	0.00087027	1.9784	0.00074754	377.84636342386364	76.026	0.25068	76.026	75.884	76.135	0					12	7	2	0	0	0	0.11938	1	31612	31612		1.1933	0	1	739390	+		43298	8452	21221	21311	50083	50083					-0.04686581101373122
YLTEYSDIQ	9	Unmodified	_YLTEYSDIQ_					0	0	0			REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	REV__nc|ENSG00000007174|Q9NYC9-2|DNAH9	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	377.845	1130.51317	2.738	0.0010345	-0.57641	-0.00021779	2.1615	0.00081673	377.8456602227114	74.026	0.33335	75.823	75.687	76.021	1.7962	-0.068061	-0.0005205	NaN	1.1933	26	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1180000	+		43299	8452	21221	21311							-0.04686581101373122
YLTFRAVQI	9	Unmodified	_YLTFRAVQI_					0	0	0		tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	tr|A0A553SRJ7|A0A553SRJ7_NIACITeichoicacidD-alanyltransferaseOS=NialliacirculansOX=1397GN=dltBPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8134643435478	2	555.818941	1109.62333	NaN	NaN	NaN	NaN	NaN	NaN	NaN	83.543	1	85.181	84.681	85.681	1.6379								0	0	0	0.317	1	35041	35041		16.942	0	1				43300	16562	21222	21312	50084	50084					0.0729030874831551
YLTILLIATF	10	Unmodified	_YLTILLIATF_					0	0	0			REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3582641482353	2	584.354825	1166.6951	2.581	0.0015082	3.6515	0.0021338	6.2325	0.003642	584.3571473356998	75.356	0.70741	76.662	76.343	77.051	1.3063					33	22	2	0	0	0	0.89646	1	31614	31614		1.8442	0	1	2180500	+		43301	10087	21223	21313	50085	50085					0.1184180338218539
YLTILLIATF	10	Unmodified	_YLTILLIATF_					0	0	0			REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3572265505791	2	584.354825	1166.6951	2.7115	0.0015845	2.1379	0.0012493	4.8494	0.0028338	584.3563008001049	73.616	1.4667	75.413	74.402	75.869	1.7962					117	46	3	0	0	0	0.80568	3	30778	30671;30778;30829		11.64	4.3511	1	4708700	+		43302	10087	21223	21313	50086;50087;50088	50087					0.1184180338218539
YLTILLIATF	10	Unmodified	_YLTILLIATF_					0	0	0			REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	REV__nc|ENSG00000138821|Q9C0K1-2|SLC39A8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3593017458916	2	584.354825	1166.6951	2.8591	0.0016707	2.8418	0.0016606	5.701	0.0033314	584.3564830012283	74.225	0.87592	76.021	75.869	76.745	1.7962					48	27	3	0	0	0	0.87343	1	31298	31298		4.3292	0	1	1865600	+		43303	10087	21223	21313	50089	50089					0.1184180338218539
YLTLIPRKFY	10	Unmodified	_YLTLIPRKFY_					0	0	0		ENST00000538260.5_1_3:137928686-137928734:+|nuORF	ENST00000538260.5_1_3:137928686-137928734:+|nuORF	ENST00000538260.5_1_3:137928686-137928734:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.2144958376884	4	329.195862	1312.75434	1.1118	0.00036599	-1.8638	-0.00061355	-0.75202	-0.00024756	329.44566636003503	50.915	0.80983	51.244	51.043	51.853	0.32824					33	25	2	0	0	0	0.12559	1	21265	21265		0.77653	0.50751	1	410780			43304	7207	21224	21314	50090	50090					0.11047699396362987
YLTLYNISI	9	Unmodified	_YLTLYNISI_					0	0	0		ATP11A|p.F924I|1|0.04|ENSG00000068650|chr13:112860329-112860329|T/A|missense_variant	ATP11A|p.F924I|1|0.04|ENSG00000068650|chr13:112860329-112860329|T/A|missense_variant	ATP11A|p.F924I|1|0.04|ENSG00000068650|chr13:112860329-112860329|T/A|missense_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2189819216728	2	550.305332	1098.59611	1.8534	0.0010199	-1.2446	-0.00068491	0.60881	0.00033503	550.3048620668515	79.147	0.15626	80.882	80.784	80.94	1.735					6	4	2	0	0	0	0.11333	1	33169	33169		2.0598	0	1	330210			43305	87	21225	21315	50091	50091					0.05075780417291753
YLTNEGIQYL	10	Unmodified	_YLTNEGIQYL_					0	0	0		ENST00000440748.1_1_7:37415149-37415623:+|nuORF;ENST00000480942.1_1_6:34392413-34392935:-|nuORF;ENST00000439253.1_1_9:90631298-90631598:+|nuORF;ENST00000408001.1_1_6:34712123-34712447:+|nuORF;chr6:34425221-34425583|429|46.7|0.0|22.16|-|ENST00000494077|RPS10-NUDT3,RPS10;ENSG00000124614|ENST00000648437|RPS10	ENST00000440748.1_1_7:37415149-37415623:+|nuORF	ENST00000440748.1_1_7:37415149-37415623:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.8080322146416	2	607.308603	1212.60265	0.71897	0.00043664	-2.6315	-0.0015981	-1.9125	-0.0011615	607.3070878055443	57.933	0.29338	59.902	59.729	60.023	1.969					15	9	2	0	0	0	0.063958	1	24300	24300		99.799	27.877	1	1982700			43306	6553	21226	21316	50092	50092					0.004856735780094823
YLTRARRIE	9	Unmodified	_YLTRARRIE_					0	0	0		ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	ENSG00000128645|ENST00000331462|HOXD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3441650271416	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.76456	1	31882	31882		4.756	2.6963	1	9601000			43307	2379	21227	21317	50093	50093					0.09147016757151505
YLTYETLAL	9	Unmodified	_YLTYETLAL_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	543.7896606326103	2	543.789515	1085.56448	3.0393	0.0016528	-1.9986	-0.0010868	1.0407	0.00056594	543.7882965187966	81.131	0.31013	82.364	82.161	82.471	1.2332					23	9	3	0	0	0	0.069258	1	34040	34040		60.39	0	1	3067500	+		43308	9297	21228	21318	50094	50094					0.02511787663343057
YLTYETLAL	9	Unmodified	_YLTYETLAL_					0	0	0			REV__ENSG00000110344|ENST00000252108|UBE4A	REV__ENSG00000110344|ENST00000252108|UBE4A	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	543.789515	1085.56448	3.0393	0.0016528	-1.9986	-0.0010868	1.0407	0.00056594	543.7882965187966	81.131	0.31013	82.364	82.161	82.471	1.2332	-0.064999	0.00043461	NaN	60.39	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3067500	+		43309	9297	21228	21318							0.02511787663343057
YLVAYAAVDL	10	Unmodified	_YLVAYAAVDL_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000487651.5_1_7:100458687-100458885:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.2973510622978	2	549.297507	1096.58046	3.0407	0.0016702	-1.0716	-0.00058864	1.969	0.0010816	549.2959959187657	74.505	0.50848	75.823	75.5	76.008	1.318					44	16	4	0	0	0	0.38674	1	31309	31309		34.102	3.4659	1	5879300			43310	3163	21229	21319	50095	50095					0.03603493900232024
YLVAYAAVDL	10	Unmodified	_YLVAYAAVDL_					0	0	0		nc|ENSG00000146828|Q9BXP2-2|SLC12A9;nc|ENSG00000146828|Q9BXP2-3|SLC12A9;nc|ENSG00000146828|Q9BXP2-4|SLC12A9;ENSG00000146828|ENST00000354161|SLC12A9;ENST00000487651.5_1_7:100458687-100458885:+|nuORF	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	nc|ENSG00000146828|Q9BXP2-2|SLC12A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	549.2976562380791	2	549.297507	1096.58046	2.9646	0.0016284	-0.94561	-0.00051942	2.019	0.001109	549.2965635019664	74.026	0.39408	75.823	75.627	76.021	1.7962					39	12	4	0	0	0	0.38674	1	31101	31101		34.102	1.797	1	4304900			43311	3163	21229	21319	50096	50096					0.03603493900232024
YLVCTRYCEEV	11	Unmodified	_YLVCTRYCEEV_					0	0	0		ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	689.3143798708916	2	689.312506	1376.61046	2.2154	0.0015271	0.16608	0.00011448	2.3815	0.0016416	689.3125808103251	48.033	0.31802	48.033	47.872	48.19	0					20	9	3	0	0	0	0.85967	1	20095	20095		12.241	2.8575	1	848950			43312	7243	21230	21320	50097	50097					-0.06278258488396204
YLVCTRYCEEV	11	Unmodified	_YLVCTRYCEEV_					0	0	0		ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	689.3104736208916	2	689.312506	1376.61046	1.2854	0.00088604	-1.5409	-0.0010622	-0.25555	-0.00017615	689.3112845223159	46.285	0.31033	47.661	47.493	47.803	1.3751					20	9	3	0	0	0	0.74096	1	19384	19384		17.113	0.96379	1	1489100			43313	7243	21230	21320	50098	50098					-0.06278258488396204
YLVCTRYCEEV	11	Unmodified	_YLVCTRYCEEV_					0	0	0		ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	ENST00000546398.5_1_12:95611596-95687545:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	689.8141357302666	2	689.312506	1376.61046	0.67656	0.00046636	-1.0525	-0.00072551	-0.37595	-0.00025915	689.3113691565621	45.927	0.27631	47.897	47.727	48.003	1.9703					18	8	3	0	0	0	0.85967	2	19199	19199;19249		12.241	0	1	1048300			43314	7243	21230	21320	50099;50100	50099					-0.06278258488396204
YLVDEEDFYGK	11	Unmodified	_YLVDEEDFYGK_					0	0	0			REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	689.3133422732353	2	689.314083	1376.61361	2.2154	0.0015271	-2.122	-0.0014627	0.093464	6.4426E-05	689.3125808103251	48.033	0.31802	48.033	47.872	48.19	0					20	9	3	0	0	0	0.84637	1	20044	20044		13.042	0.80181	1	848950	+		43315	10892	21231	21321	50101	50101					-0.059629688383893154
YLVDEEDFYGK	11	Unmodified	_YLVDEEDFYGK_					0	0	0			REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	REV__TRANK1|p.K1873Nfs*7|1|0.09|ENSG00000168016|chr3:36833832-36833833|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	689.3141357302666	2	689.314083	1376.61361	1.6837	0.0011606	-2.8844	-0.0019883	-1.2007	-0.00082766	689.3110434818566	47.652	0.3469	47.983	47.785	48.132	0.33034					25	11	3	0	0	0	0.77451	1	20024	20024		16.149	3.9084	1	1535000	+		43316	10892	21231	21321	50102	50102					-0.059629688383893154
YLVDYLENY	9	Unmodified	_YLVDYLENY_					0	0	0		ENSG00000036672|ENST00000260187|USP2	ENSG00000036672|ENST00000260187|USP2	ENSG00000036672|ENST00000260187|USP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	596.2822753787041	2	596.282054	1190.54956	1.6683	0.00099479	-0.55984	-0.00033382	1.1085	0.00066097	596.2821251672062	43.771	0.25208	44.095	43.992	44.244	0.32389					12	7	2	0	0	0	0.61249	1	18373	18373		10.824	0	1	526130			43317	649	21232	21322	50103	50103					-0.03809704204650188
YLVELKYMI	9	Unmodified	_YLVELKYMI_					0	0	0			REV__nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	REV__nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	586.3297607302666	2	586.325211	1170.63587	2.6266	0.00154	1.8418	0.0010799	4.4684	0.0026199	586.3261607679783	69.867	0.37592	71.22	70.99	71.366	1.3536					29	11	3	0	0	0	0.24063	1	29358	29358		28.487	3.0875	1	4520500	+		43318	9018	21233	21323	50104	50104					0.05737584096345927
YLVEPLMKF	9	Unmodified	_YLVEPLMKF_					0	0	0			REV__ENSG00000066557|ENST00000370952|LRRC40	REV__ENSG00000066557|ENST00000370952|LRRC40	MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3187744021416	2	570.312103	1138.60965	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.851	1	63.808	63.308	64.308	1.9571								0	0	0	0.18991	1	25948	25948		26.884	0.61551	1		+		43319	8686	21234	21324	50105	50105					0.04589314924874088
YLVFGRGP	8	Unmodified	_YLVFGRGP_					0	0	0			REV__ENST00000526368.1_1_11:62530297-62533976:+|nuORF	REV__ENST00000526368.1_1_11:62530297-62533976:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	454.7569152712822	2	454.75307	907.491587	3.201	0.0014557	0.91205	0.00041476	4.1131	0.0018704	454.75309659923613	74.703	0.43356	75.027	74.864	75.297	0.32464					21	13	3	0	0	0	0.88958	1	31235	31235		2.8892	0	1	1029000	+		43320	10891	21235	21325	50106	50106					0.034141234512503615
YLVGFIIKRF	10	Unmodified	_YLVGFIIKRF_					0	0	0			REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3828002810478	2	628.381709	1254.74886	2.1091	0.0013253	1.3234	0.00083163	3.4326	0.002157	628.3824332062296	77.21	1.061	77.21	76.688	77.749	0					67	33	3	0	0	0	0.89646	1	32095	32095		1.8442	0.36234	1	2391000	+		43321	14767	21236	21326	50107	50107					0.1316802060455302
YLVGFIIKRF	10	Unmodified	_YLVGFIIKRF_					0	0	0			REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	628.3853027224541	2	628.381709	1254.74886	2.0785	0.0013061	1.4342	0.00090123	3.5128	0.0022073	628.3826591618432	79.45	1.881	79.45	78.597	80.478	0					159	60	4	0	0	0	0.89646	1	33438	33438		1.8442	0.19162	1	6184900	+		43322	14767	21236	21326	50108	50108					0.1316802060455302
YLVGFIIKRF	10	Unmodified	_YLVGFIIKRF_					0	0	0			REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	REV__tr|A0A553SGS8|A0A553SGS8_NIACICPBPfamilyintramembranemetalloproteaseOS=NialliacirculansOX=1397GN=CEQ21_11410PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	628.3841430544853	2	628.381709	1254.74886	2.0099	0.001263	1.8396	0.0011559	3.8495	0.0024189	628.38273265989	77.133	1.7465	77.45	76.203	77.95	0.31653					136	55	4	0	0	0	0.89646	1	32115	32115		1.8442	0.36234	1	2978200	+		43323	14767	21236	21326	50109	50109					0.1316802060455302
YLVIWSDLL	9	Unmodified	_YLVIWSDLL_					0	0	0			REV__ADGRG2|p.A686V|1|0.08|ENSG00000173698|chrX:19003019-19003019|G/A|missense_variant	REV__ADGRG2|p.A686V|1|0.08|ENSG00000173698|chrX:19003019-19003019|G/A|missense_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	561.2589599490166	2	561.3157	1120.61685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.845	1	84.058	83.558	84.558	1.2125								0	0	0	0.39421	1	34772	34772		9.3474	0	1		+		43324	8088	21237	21327	50110	50110					0.06136370796957635
YLVKLPFW	8	Unmodified	_YLVKLPFW_					0	0	0			REV__nc|ENSG00000223802|P27544-2|CERS1	REV__nc|ENSG00000223802|P27544-2|CERS1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	532.8148071169853	2	533.310221	1064.60589	1.9802	0.0010561	1.002	0.00053437	2.9822	0.0015904	533.3103278284466	49.411	0.74887	51.388	50.978	51.727	1.9772					45	23	3	0	0	0	2.3239	1	20731	20731		5.7604	0	1	1814200	+		43325	11887	21238	21328	50111	50111					0.076170132133484
YLVKLPFW	8	Unmodified	_YLVKLPFW_					0	0	0			REV__nc|ENSG00000223802|P27544-2|CERS1	REV__nc|ENSG00000223802|P27544-2|CERS1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	533.310221	1064.60589	2.5385	0.0013538	-0.23129	-0.00012335	2.3072	0.0012304	533.3097972671367	49.781	0.78907	51.172	50.948	51.737	1.3911	-0.10824	-0.00065378	NaN	5.7604	43	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1633500	+		43326	11887	21238	21328							0.076170132133484
YLVLSANQL	9	Unmodified	_YLVLSANQL_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7909118533134	2	510.78985	1019.56515	3.6855	0.0018825	-1.2451	-0.00063597	2.4404	0.0012465	510.7890248606213	60.463	0.40874	62.428	62.199	62.607	1.9653					20	12	2	0	0	0	0.39927	1	25370	25370		20.454	1.0146	1	836470	+		43327	10824	21239	21329	50112	50112					0.056146271030456774
YLVLSANQL	9	Unmodified	_YLVLSANQL_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	510.78985	1019.56515	3.507	0.0017913	-0.57242	-0.00029239	2.9346	0.0014989	510.78977424484725	60.953	0.41413	62.373	62.121	62.535	1.4196	-0.027668	0.00034795	NaN	20.454	21	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	914630	+		43328	10824	21239	21329							0.056146271030456774
YLVLSANQL	9	Unmodified	_YLVLSANQL_					0	0	0			REV__ENSG00000166450|ENST00000389286|PRTG	REV__ENSG00000166450|ENST00000389286|PRTG	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	510.78985	1019.56515	3.6855	0.0018825	-1.2451	-0.00063597	2.4404	0.0012465	510.7890248606213	60.463	0.40874	62.428	62.199	62.607	1.9653	0.027668	-0.00033921	NaN	20.454	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	836470	+		43329	10824	21239	21329							0.056146271030456774
YLVLTLIVAKV	11	Unmodified	_YLVLTLIVAKV_					0	0	0		ENST00000264657.9_1_17:40465456-40465696:-|nuORF	ENST00000264657.9_1_17:40465456-40465696:-|nuORF	ENST00000264657.9_1_17:40465456-40465696:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	411.2732116580009	3	411.272325	1230.79515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.88	1	111.03	110.53	111.53	0.15038								0	0	0	0.63775	1	48068	48068		0	0	1				43330	5651	21240	21330	50113	50113					0.18898040715976094
YLVPELDGV	9	Unmodified	_YLVPELDGV_					0	0	0		ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1004.525073230267	1	1004.52989	1003.52261	1.5635	0.0015706	-0.078374	-7.8729E-05	1.4851	0.0014919	1004.5291123505552	69.871	0.28659	69.871	69.675	69.961	0					13	8	2	0	0	0	0.15478	1	29071	29071		38.151	7.9264	1	415840			43331	5256	21241	21331	50114	50114					0.020992319748188493
YLVPELDGV	9	Unmodified	_YLVPELDGV_					0	0	0		ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1004.530932605267	1	1004.52989	1003.52261	1.6184	0.0016257	-0.072122	-7.2448E-05	1.5463	0.0015533	1004.5304758937702	69.383	0.31586	69.705	69.562	69.878	0.32224					15	9	2	0	0	0	0.076627	2	29024	29024;29079		57.471	21.427	1	651740			43332	5256	21241	21331	50115;50116	50115					0.020992319748188493
YLVPELDGV	9	Unmodified	_YLVPELDGV_					0	0	0		ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	ENSG00000215305|ENST00000380445|VPS16	MSMS	GG20161007_CRH_Patient100_A02_02	2	502.7699157595634	2	502.768583	1003.52261	NaN	NaN	NaN	NaN	NaN	NaN	NaN	69.444	1	69.766	69.266	70.266	0.32224								0	0	0	0.30487	1	29066	29066		18.135	4.6271	1				43333	5256	21241	21331	50117	50117					0.020992319748188493
YLVPKSTILF	10	Unmodified	_YLVPKSTILF_					0	0	0			REV__tr|A0A7D7A224|A0A7D7A224_9CLOTRibosome-bindingATPaseYchFOS=ClostridiumintestinaleOX=36845GN=ychFPE=3SV=1	REV__tr|A0A7D7A224|A0A7D7A224_9CLOTRibosome-bindingATPaseYchFOS=ClostridiumintestinaleOX=36845GN=ychFPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3549072146416	2	590.85245	1179.69035	2.174	0.0012845	-0.34108	-0.00020153	1.8329	0.001083	590.8522421636728	84.127	0.51631	85.765	85.559	86.075	1.6379					41	16	4	0	0	0	0.6819	1	35379	35379		19.257	3.1079	1	16162000	+		43334	15841	21242	21332	50118	50118					0.10768919239421848
YLVRGARTNK	10	Unmodified	_YLVRGARTNK_					0	0	0			REV__ENST00000508559.1_1_5:175735354-175735840:+|nuORF	REV__ENST00000508559.1_1_5:175735354-175735840:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3444702029228	2	589.343646	1176.67274	2.5576	0.0015073	-0.53091	-0.00031289	2.0267	0.0011944	589.3430959013597	76.268	1.982	77.562	76.694	78.676	1.2938					194	63	4	0	0	0	0.88579	1	32379	32379		2.9952	0.93549	1	9601000	+		43335	13554	21243	21333	50119	50119					0.09147016757151505
YLVSLCPYPF	10	Unmodified	_YLVSLCPYPF_					0	0	0		HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense;chr1:54883773-54901046|198|19.12|0.0|20.87|-|0|TE_info:HERVH-int,HERVH-int_dup93,ERV1,LTR,donor,-,54901046,54903183|DHCR24,None|4	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.3045532107353	2	601.301736	1200.58892	3.331	0.0020029	0.94849	0.00057033	4.2795	0.0025733	601.3029550070495	81.348	0.43284	82.581	82.378	82.811	1.2332					33	13	4	0	0	0	0.48057	2	34130	34130;34181		28.487	3.813	1	3534600			43336	173	21244	21334	50120;50121	50120					-0.0033527545481319976
YLVSLCPYPF	10	Unmodified	_YLVSLCPYPF_					0	0	0		HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense;chr1:54883773-54901046|198|19.12|0.0|20.87|-|0|TE_info:HERVH-int,HERVH-int_dup93,ERV1,LTR,donor,-,54901046,54903183|DHCR24,None|4	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense	HERVH-int_dup93|chr1:54900195-54903183:-|1.1315455096136964|0.040738276592419|4.8|412.0|47|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.3035766482353	2	601.301736	1200.58892	2.6148	0.0015723	2.2029	0.0013246	4.8177	0.0028969	601.3027774132217	80.929	0.34196	82.625	82.456	82.798	1.6959					26	10	3	0	0	0	0.48057	1	33935	33935		28.487	1.6032	1	2529900			43337	173	21244	21334	50122	50122					-0.0033527545481319976
YLVYILNEL	9	Unmodified	_YLVYILNEL_					0	0	0		ENST00000541537.5_1_12:12966301-12977638:+|nuORF;ENSG00000213782|ENST00000358007|DDX47	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3244506716728	2	570.320983	1138.62741	4.1791	0.0023834	1.676	0.00095587	5.8551	0.0033393	570.3221540225034	91.517	0.34596	92.453	92.214	92.56	0.93623					22	10	3	0	0	0	0.20838	1	38515	38515		32.117	0	1	890300			43338	5229	21245	21335	50123	50123					0.06364353451385796
YLVYILNEL	9	Unmodified	_YLVYILNEL_					0	0	0		ENST00000541537.5_1_12:12966301-12977638:+|nuORF;ENSG00000213782|ENST00000358007|DDX47	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3253051638603	2	570.320983	1138.62741	3.5794	0.0020414	4.3117	0.002459	7.891	0.0045004	570.323741889395	91.057	0.38008	92.423	92.186	92.566	1.366					15	11	2	0	0	0	0.18999	1	38325	38325		34.187	13.316	1	1082400			43339	5229	21245	21335	50124	50124					0.06364353451385796
YLVYILNEL	9	Unmodified	_YLVYILNEL_					0	0	0		ENST00000541537.5_1_12:12966301-12977638:+|nuORF;ENSG00000213782|ENST00000358007|DDX47	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	570.320983	1138.62741	1.7334	0.00098857	-0.38494	-0.00021954	1.3484	0.00076903	570.3207456454569	92.802	0.26987	92.802	92.621	92.891	0	0.24278	-0.0021476	NaN	34.187	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	634630			43340	5229	21245	21335							0.06364353451385796
YLWENSWEM	9	Unmodified	_YLWENSWEM_					0	0	0		ENST00000479810.6_1_21:42694930-42716440:+|nuORF;ENST00000398647.7_1_21:42688762-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.2673828005791	2	629.265881	1256.51721	2.1801	0.0013719	0.018812	1.1838E-05	2.1989	0.0013837	629.2659437842051	75.739	0.52576	77.041	76.732	77.258	1.3022					40	16	3	0	0	0	0.10993	3	31775	31729;31775;31834		46.021	32.115	1	2922600			43341	6326	21246	21336	50125;50126;50127	50126					-0.10078814879329911
YLWENSWEM	9	Unmodified	_YLWENSWEM_					0	0	0		ENST00000479810.6_1_21:42694930-42716440:+|nuORF;ENST00000398647.7_1_21:42688762-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.2682372927666	2	629.265881	1256.51721	2.2214	0.0013979	-0.2473	-0.00015561	1.9741	0.0012423	629.2658290466319	75.231	0.43565	77.013	76.76	77.196	1.7817					29	13	3	0	0	0	0.10993	3	31564	31516;31564;31607		46.021	29.079	1	3439900			43342	6326	21246	21336	50128;50129;50130	50129					-0.10078814879329911
YLWENSWEM	9	Unmodified	_YLWENSWEM_					0	0	0		ENST00000479810.6_1_21:42694930-42716440:+|nuORF;ENST00000398647.7_1_21:42688762-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	629.265881	1256.51721	2.115	0.0013309	1.3143	0.00082703	3.4293	0.0021579	629.2664497298007	77.117	0.21925	77.117	77.002	77.221	0	0.060649	0.001287	NaN	46.021	14	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	502010			43343	6326	21246	21336							-0.10078814879329911
YLWENSWEM	9	Unmodified	_YLWENSWEM_					0	0	0		ENST00000479810.6_1_21:42694930-42716440:+|nuORF;ENST00000398647.7_1_21:42688762-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	ENST00000479810.6_1_21:42694930-42716440:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	629.265881	1256.51721	2.0548	0.001293	1.1544	0.00072643	3.2092	0.0020194	629.2677944514897	76.739	0.25186	77.056	76.913	77.165	0.31653	-0.00090866	0.0010859	NaN	46.021	14	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	530190			43344	6326	21246	21336							-0.10078814879329911
YLWLIYCL	8	Unmodified	_YLWLIYCL_					0	0	0		nc|ENSG00000133858|O60293-2|ZFC3H1;ENSG00000133858|ENST00000378743|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	543.7902099490166	2	543.788264	1085.56198	1.9312	0.0010501	-0.50163	-0.00027278	1.4295	0.00077736	543.7877197497919	82.57	0.30619	82.57	82.43	82.737	0					13	9	2	0	0	0	0.84707	1	34450	34450		17.087	0	1	886530			43345	2585	21247	21337	50131	50131					0.022616607246845888
YLWLIYCL	8	Unmodified	_YLWLIYCL_					0	0	0		nc|ENSG00000133858|O60293-2|ZFC3H1;ENSG00000133858|ENST00000378743|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	nc|ENSG00000133858|O60293-2|ZFC3H1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	543.7875854372978	2	543.788264	1085.56198	2.1687	0.0011793	-1.3029	-0.00070851	0.8658	0.00047081	543.7871992109718	82.07	0.30794	82.35	82.244	82.551	0.2802					16	9	2	0	0	0	0.76629	1	34379	34379		24.21	0	1	1035100			43346	2585	21247	21337	50132	50132					0.022616607246845888
YLWQRNLR	8	Unmodified	_YLWQRNLR_					0	0	0		ELMO3|p.L251W|1|0.15|ENSG00000102890|chr16:67200736-67200736|T/G|missense_variant;ELMO3|p.M342Ifs*43|1|0.09|ENSG00000102890|chr16:67201591-67201591|G/-|frameshift_variant;nc|ENSG00000102890|Q96BJ8-2|ELMO3;ENSG00000102890|ENST00000393997|ELMO3;nc|ENSG00000102890|Q96BJ8-3|ELMO3	ELMO3|p.L251W|1|0.15|ENSG00000102890|chr16:67200736-67200736|T/G|missense_variant	ELMO3|p.L251W|1|0.15|ENSG00000102890|chr16:67200736-67200736|T/G|missense_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	574.8199951052666	2	574.819807	1147.62506	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.235	1	57.235	56.735	57.735	0								0	0	0	1.0178	1	23883	23883		9.3474	0	1				43347	448	21248	21338	50133	50133					0.05715362556929904
YLYAVGNK	8	Unmodified	_YLYAVGNK_					0	0	0			REV__ENSG00000109758|ENST00000382774|HGFAC	REV__ENSG00000109758|ENST00000382774|HGFAC	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	464.1861450076103	2	464.25036	926.486168	1.0787	0.00050076	0.46674	0.00021668	1.5454	0.00071745	464.250483957311	29.682	0.30806	30.964	30.826	31.134	1.2825					22	9	3	0	0	0	2.3239	1	12511	12511		2.3027	0.4585	1	2870700		+	43348	9280	21249	21339	50134	50134					0.01998399868762135
YLYDLLRLR	9	Unmodified	_YLYDLLRLR_					0	0	0		tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	tr|A0A7D6VSA5|A0A7D6VSA5_9CLOTPhageportalproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_10175PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	408.9086486697197	3	408.908157	1223.70264	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.877	1	58.846	58.346	59.346	1.9684								0	0	0	0.30245	1	23859	23859		18.373	0	1				43349	16861	21250	21340	50135	50135					0.09973955702434978
YLYDLNHTL	9	Unmodified	_YLYDLNHTL_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	576.2917358279228	2	576.290214	1150.56587	1.6142	0.00093026	0.20625	0.00011886	1.8205	0.0010491	576.2899387194262	49.904	0.24639	50.235	50.081	50.327	0.33019					11	7	2	0	0	0	0.32838	1	20912	20912		24.021	4.7636	1	562190			43350	1692	21251	21341	50136	50136					-0.0033857824791994062
YLYDLNHTL	9	Unmodified	_YLYDLNHTL_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.2950927615166	2	576.290214	1150.56587	0.77641	0.00044743	3.8356	0.0022104	4.612	0.0026578	576.2954813062794	52.756	0.37994	54.155	53.932	54.312	1.399					19	11	3	0	0	0	0.12174	1	22084	22084		42.095	5.9675	1	3854700			43351	1692	21251	21341	50137	50137					-0.0033857824791994062
YLYDLNHTL	9	Unmodified	_YLYDLNHTL_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.2916747927666	2	576.290214	1150.56587	2.2552	0.0012997	1.4046	0.00080943	3.6598	0.0021091	576.289332823501	48.11	0.2764	50.087	49.959	50.236	1.9772					13	8	2	0	0	0	0.070055	1	20164	20164		60.074	31.587	1	1241400			43352	1692	21251	21341	50138	50138					-0.0033857824791994062
YLYDLNHTL	9	Unmodified	_YLYDLNHTL_					0	0	0		ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	ENSG00000110057|ENST00000227471|UNC93B1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	576.290214	1150.56587	1.2129	0.00069896	5.0838	0.0029297	6.2966	0.0036287	576.2919299780797	48.603	0.21407	49.991	49.895	50.109	1.388	-0.11325	0.0041597	NaN	60.074	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1099300			43353	1692	21251	21341							-0.0033857824791994062
YLYDRLLRI	9	Unmodified	_YLYDRLLRI_					0	0	0		ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.9081909060478	3	408.908157	1223.70264	0.11719	4.7918E-05	0.093409	3.8196E-05	0.21059	8.6114E-05	408.9076889581885	57.499	0.18633	58.914	58.767	58.953	1.4145					13	6	3	0	0	0	0.28863	1	24082	24082		26.021	9.4548	1	2770500			43354	1318	21252	21342	50139	50139					0.09973955702457715
YLYDRLLRI	9	Unmodified	_YLYDRLLRI_					0	0	0		ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		3	408.908157	1223.70264	0.74259	0.00030365	1.0088	0.00041251	1.7514	0.00071616	408.9082533574502	59.292	0.38171	59.292	59.099	59.481	0	0.22888	0.00093242	NaN	26.021	18	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1019500			43355	1318	21252	21342							0.09973955702457715
YLYDRLLRI	9	Unmodified	_YLYDRLLRI_					0	0	0		ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	ENSG00000101003|ENST00000262460|GINS1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	408.908157	1223.70264	2.6575	0.0010867	-0.55463	-0.00022679	2.1029	0.00085988	408.9076220251241	58.658	0.37361	58.984	58.811	59.184	0.32553	-0.079352	-0.00098549	NaN	26.021	20	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	925870			43356	1318	21252	21342							0.09973955702457715
YLYDSYLR	8	Unmodified	_YLYDSYLR_					0	0	0			REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	REV__nc|ENSG00000182022|Q7LFX5-2|CHST15	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	546.7729369997978	2	546.771657	1091.52876	1.8042	0.00098647	1.1751	0.00064249	2.9792	0.001629	547.2736443649	62.91	0.24667	62.91	62.77	63.017	0					12	7	2	0	0	0	0.87276	1	26213	26213		13.508	0	1	457410	+		43357	11336	21253	21343	50140	50140					-0.013342497936719155
YLYENTQCWER	11	Unmodified	_YLYENTQCWER_					0	0	0		nc|ENSG00000010310|P48546-2|GIPR;nc|ENSG00000010310|P48546-3|GIPR;ENSG00000010310|ENST00000590918|GIPR	nc|ENSG00000010310|P48546-2|GIPR	nc|ENSG00000010310|P48546-2|GIPR	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	502.2229797244072	3	502.222364	1503.64526	1.8879	0.00094813	1.7506	0.00087917	3.6384	0.0018273	502.2232919938524	54.787	0.58542	54.787	54.424	55.009	0					38	18	4	0	0	0	1.0224	2	22897	22777;22897		2.4348	1.325	1	2224200			43358	550	21254	21344	50141;50142	50142					-0.0864129935607707
YLYGGKNI	8	Unmodified	_YLYGGKNI_					0	0	0			REV__tr|A0A553SHT7|A0A553SHT7_NIACIYdeI/OmpD-associatedfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13535PE=4SV=1	REV__tr|A0A553SHT7|A0A553SHT7_NIACIYdeI/OmpD-associatedfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	464.2514221072197	2	464.25036	926.486168	1.6239	0.00075387	0.23078	0.00010714	1.8546	0.00086101	464.2504177515425	31.203	0.54403	31.203	30.99	31.534	0					45	17	4	0	0	0	0.74212	3	13080	13030;13080;13132		26.341	0	1	13799000	+		43359	14816	21255	21345	50143;50144;50145	50144					0.01998399868762135
YLYGGKNI	8	Unmodified	_YLYGGKNI_					0	0	0			REV__tr|A0A553SHT7|A0A553SHT7_NIACIYdeI/OmpD-associatedfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13535PE=4SV=1	REV__tr|A0A553SHT7|A0A553SHT7_NIACIYdeI/OmpD-associatedfamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_13535PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	464.2506591677666	2	464.25036	926.486168	1.0787	0.00050076	0.46674	0.00021668	1.5454	0.00071745	464.250483957311	29.682	0.30806	30.964	30.826	31.134	1.2825					22	9	3	0	0	0	0.82039	1	12472	12472		19.439	0	1	2870700	+		43360	14816	21255	21345	50146	50146					0.01998399868762135
YLYIDITL	8	Unmodified	_YLYIDITL_					0	0	0			REV__ENST00000354179.8_2_5:176726873-176727005:+|nuORF	REV__ENST00000354179.8_2_5:176726873-176727005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.2823364138603	2	507.281326	1012.5481	1.4796	0.00075056	-1.7391	-0.00088222	-0.25954	-0.00013166	507.2795887907629	58.099	0.88167	60.068	59.962	60.844	1.969					65	28	3	0	0	0	0.47134	1	24682	24682		49.669	5.8965	1	14737000	+		43361	12535	21256	21346	50147	50147					0.04232706497225536
YLYILLTIF	9	Unmodified	_YLYILLTIF_					0	0	0		ENSG00000232382|ENST00000642057|OR5K1;ENSG00000231861|ENST00000427338|OR5K2	ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	579.8472167849541	2	579.844093	1157.67363	4.631	0.0026852	1.402	0.00081291	6.0329	0.0034982	579.8450930476072	87.241	0.33786	88.737	88.55	88.888	1.4953					27	10	3	0	0	0	0.75267	2	36784	36784;36834		5.2307	0	1	2116400			43362	5307	21257	21347	50148;50149	50148					0.10110418353451678
YLYILLTIF	9	Unmodified	_YLYILLTIF_					0	0	0		ENSG00000232382|ENST00000642057|OR5K1;ENSG00000231861|ENST00000427338|OR5K2	ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	579.844093	1157.67363	2.493	0.0014456	2.6239	0.0015214	5.1169	0.002967	579.8456136579196	88.242	0.4658	88.477	88.291	88.756	0.2347	-0.086977	0.00016102	NaN	5.2307	41	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5435500			43363	5307	21257	21347							0.10110418353451678
YLYILLTIF	9	Unmodified	_YLYILLTIF_					0	0	0		ENSG00000232382|ENST00000642057|OR5K1;ENSG00000231861|ENST00000427338|OR5K2	ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	579.844093	1157.67363	4.5225	0.0026224	3.8555	0.0022356	8.3781	0.004858	579.8464012605159	87.518	0.37034	88.609	88.428	88.798	1.0918	0.045692	0.0015893	NaN	5.2307	26	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1560200			43364	5307	21257	21347							0.10110418353451678
YLYILLTIF	9	Unmodified	_YLYILLTIF_					0	0	0		ENSG00000232382|ENST00000642057|OR5K1;ENSG00000231861|ENST00000427338|OR5K2	ENSG00000232382|ENST00000642057|OR5K1	ENSG00000232382|ENST00000642057|OR5K1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	579.844093	1157.67363	4.631	0.0026852	1.402	0.00081291	6.0329	0.0034982	579.8450930476072	87.241	0.33786	88.737	88.55	88.888	1.4953	0.17296	-0.001256	NaN	5.2307	27	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2116400			43365	5307	21257	21347							0.10110418353451678
YLYLVFVI	8	Unmodified	_YLYLVFVI_					0	0	0		L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	515.3049804568291	2	515.304604	1028.59466	3.2274	0.0016631	-4.4621	-0.0022994	-1.2347	-0.00063625	515.3025506703588	72.556	0.46146	73.886	73.702	74.164	1.3298					28	14	3	0	0	0	0.84707	1	30482	30482		17.087	3.5787	1	1363400			43366	7720	21258	21348	50150	50150					0.08150191119170813
YLYLVFVI	8	Unmodified	_YLYLVFVI_					0	0	0		L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	L1MEf_dup6140|chr8:143855850-143856370:+|1.5610221762686003|0.2389077802373403|2.71|429.0|30|3|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	515.304604	1028.59466	2.9685	0.0015297	-4.4054	-0.0022701	-1.4369	-0.00074045	515.3027291617012	72.004	0.42472	73.828	73.694	74.119	1.824	-0.028782	3.9183E-05	NaN	17.087	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1444500			43367	7720	21258	21348							0.08150191119170813
YLYQILQGI	9	Unmodified	_YLYQILQGI_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	555.8145629763603	2	555.813325	1109.6121	2.4995	0.0013892	0.13212	7.3431E-05	2.6316	0.0014627	555.813295348144	84.805	0.35071	85.065	84.854	85.204	0.26083					19	10	3	0	0	0	0.15478	1	35456	35456		38.151	17.28	1	1017700			43368	179	21259	21349	50151	50151					0.061674866541807205
YLYQILQGI	9	Unmodified	_YLYQILQGI_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.8150512576103	2	555.813325	1109.6121	1.3555	0.00075339	2.9346	0.0016311	4.2901	0.0023845	555.8152310487586	83.926	0.38905	85.114	84.89	85.28	1.1879					18	12	2	0	0	0	0.069258	1	35206	35206		60.39	22.238	1	2435900			43369	179	21259	21349	50152	50152					0.061674866541807205
YLYQILQGI	9	Unmodified	_YLYQILQGI_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.8189575076103	2	555.813325	1109.6121	1.5632	0.00086886	0.7691	0.00042748	2.3323	0.0012963	555.8136530435667	83.431	0.21722	85.069	84.95	85.167	1.6379					9	6	2	0	0	0	0.11478	1	34984	34984		44.407	14.182	1	1999800			43370	179	21259	21349	50153	50153					0.061674866541807205
YLYQILQGI	9	Unmodified	_YLYQILQGI_					0	0	0		ENSG00000170312|ENST00000395284|CDK1;chr10:60778668-60780141|406|12.96|0.53|4.61|+|ENST00000448257|CDK1,CDK1	ENSG00000170312|ENST00000395284|CDK1	ENSG00000170312|ENST00000395284|CDK1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	555.813325	1109.6121	2.013	0.0011189	0.025521	1.4185E-05	2.0386	0.0011331	555.8134907339552	85.308	0.28447	85.308	85.164	85.448	0	0.16903	-0.00034128	NaN	60.39	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1318000			43371	179	21259	21349							0.061674866541807205
YLYRTGLL	8	Unmodified	_YLYRTGLL_					0	0	0		ENST00000426194.1_1_18:30352166-30353352:+|nuORF	ENST00000426194.1_1_18:30352166-30353352:+|nuORF	ENST00000426194.1_1_18:30352166-30353352:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7878295779228	2	499.78711	997.559667	2.9639	0.0014813	-2.9925	-0.0014956	-0.02862	-1.4304E-05	499.78540610696393	82.856	0.37251	84.069	83.826	84.199	1.2125					22	11	2	0	0	0	0.87655	1	34782	34782		11.114	3.8252	1	2180000			43372	6466	21260	21350	50154	50154					0.06078948311221666
YLYRVVLL	8	Unmodified	_YLYRVVLL_					0	0	0		ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	ENSG00000162944|ENST00000295049|RFTN2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.8283569216728	2	519.820953	1037.62735	3.6657	0.0019055	-0.17323	-9.0048E-05	3.4925	0.0018155	519.8214921081087	73.445	1.1313	74.763	74.307	75.438	1.318					116	35	5	0	0	0	0.74212	1	30701	30701		26.341	0	1	251070000			43373	3655	21261	21351	50155	50155					0.11004398242039315
YMAEQLLLI	9	Unmodified	_YMAEQLLLI_					0	0	0		tr|A0A553SFH7|A0A553SFH7_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08870PE=4SV=1	tr|A0A553SFH7|A0A553SFH7_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08870PE=4SV=1	tr|A0A553SFH7|A0A553SFH7_NIACITetR/AcrRfamilytranscriptionalregulatorOS=NialliacirculansOX=1397GN=CEQ21_08870PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	547.3047363162041	2	547.301736	1092.58892	4.3475	0.0023794	2.2503	0.0012316	6.5977	0.0036109	547.3024409940914	87.504	0.33794	88.596	88.366	88.704	1.0918					15	10	2	0	0	0	0.24063	1	36887	36887		28.487	6.7402	1	1280400			43374	16057	21262	21352	50156	50156					0.0463272454521757
YMENIKHVEK	10	Unmodified	_YMENIKHVEK_					0	0	0			REV__ENST00000517431.1_1_8:17946857-17947013:-|nuORF	REV__ENST00000517431.1_1_8:17946857-17947013:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886901736259	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9245	1	1.9245	1.4245	2.4245	0								0	0	0	0.66255	1	789	789		0.13989	0	1		+		43375	10679	21263	21353	50157	50157					0.010571113458127002
YMENIKHVEK	10	Unmodified	_YMENIKHVEK_					0	0	0			REV__ENST00000517431.1_1_8:17946857-17947013:-|nuORF	REV__ENST00000517431.1_1_8:17946857-17947013:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8888732790947	3	430.888546	1289.64381	NaN	NaN	NaN	NaN	NaN	NaN	NaN	31.765	1	31.765	31.265	32.265	0								0	0	0	0.66254	1	13309	13309		0.15932	0	1		+		43376	10679	21263	21353	50158	50158					0.010571113458127002
YMIDNVILL	9	Unmodified	_YMIDNVILL_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1;ENSG00000147614|ENST00000285393|ATP6V0D2	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MSMS	GG20161007_CRH_Patient100_W632_02	4	547.3040038943291	2	547.301736	1092.58892	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.037	1	88.532	88.032	89.032	1.4953								0	0	0	0.092123	1	36694	36694		36.044	7.5574	1				43377	3540	21264	21354	50159	50159					0.0463272454521757
YMIKLKLK	8	Unmodified	_YMIKLKLK_					0	0	0		nc|ENSG00000156042|Q5T0N1-6|CFAP70;nc|ENSG00000156042|Q5T0N1-7|CFAP70;nc|ENSG00000156042|Q5T0N1-2|CFAP70;nc|ENSG00000156042|Q5T0N1|CFAP70;ENSG00000156042|ENST00000355577|CFAP70	nc|ENSG00000156042|Q5T0N1-6|CFAP70	nc|ENSG00000156042|Q5T0N1-6|CFAP70	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2234374880791	3	346.224429	1035.65146	NaN	NaN	NaN	NaN	NaN	NaN	NaN	73.867	1	73.867	73.367	74.367	0								0	0	0	1.0178	1	30760	30760		0	0	1				43378	3437	21265	21355	50160	50160					0.13505915404016378
YMKWWRFIIF	10	Unmodified	_YMKWWRFIIF_					0	0	0			REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	REV__nc|ENSG00000138688|Q2LD37-7|BLTP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	745.8943359255791	2	745.394293	1488.77403	3.2446	0.0024185	-4.4885	-0.0033457	-1.2439	-0.00092719	745.3906984569037	90.66	0.32224	92.026	91.864	92.186	1.366					15	9	2	0	0	0	0.65574	1	38194	38194		20.454	5.2051	1	2111900	+		43379	10075	21266	21356	50161	50161					0.04919752135469935
YMLDLQKQL	9	Unmodified	_YMLDLQKQL_					0	0	0		nc|ENSG00000097033|Q9Y371-3|SH3GLB1;SH3GLB1|p.L313Pfs*3|1|0.3|ENSG00000097033|chr1:86742382-86742383|-/C|frameshift_variant;ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	576.3125488162041	2	576.310092	1150.60563	2.1685	0.0012497	0.16906	9.7431E-05	2.3375	0.0013471	576.3101400998353	50.477	0.36847	51.871	51.709	52.078	1.3938					18	11	2	0	0	0	0.091139	1	21113	21113		52.268	18.166	1	1545000			43380	1199	21267	21357	50162	50162					0.03635225431139588
YMLDLQKQL	9	Unmodified	_YMLDLQKQL_					0	0	0		nc|ENSG00000097033|Q9Y371-3|SH3GLB1;SH3GLB1|p.L313Pfs*3|1|0.3|ENSG00000097033|chr1:86742382-86742383|-/C|frameshift_variant;ENSG00000097033|ENST00000370558|SH3GLB1;nc|ENSG00000097033|Q9Y371-2|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	nc|ENSG00000097033|Q9Y371-3|SH3GLB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	576.3126098513603	2	576.310092	1150.60563	1.6608	0.00095714	-0.40881	-0.0002356	1.252	0.00072154	576.309617964882	49.959	0.43776	51.936	51.601	52.039	1.9772					27	13	3	0	0	0	0.049839	1	20906	20906		68.081	9.4019	1	1636900			43381	1199	21267	21357	50163	50163					0.03635225431139588
YMLRTNHWKYI	11	Unmodified	_YMLRTNHWKYI_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	508.9312621951103	3	508.930856	1523.77074	1.9293	0.00098189	2.5291	0.0012872	4.4585	0.0022691	508.93097212692334	52.534	0.24167	52.859	52.682	52.924	0.32507					18	7	3	0	0	0	1.0031	1	22028	22028		1.4551	0.67859	1	1391800			43382	3767	21268	21358	50164	50164					0.029804572908005866
YMLRTNHWKYI	11	Unmodified	_YMLRTNHWKYI_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	508.930856	1523.77074	2.1729	0.0011059	3.1306	0.0015933	5.3036	0.0026992	508.93220310309033	53.202	0.38307	53.202	53.044	53.427	0	0.24712	-0.00091748	NaN	1.4551	21	14	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2646900			43383	3767	21268	21358							0.029804572908005866
YMLRTNHWKYI	11	Unmodified	_YMLRTNHWKYI_					0	0	0		ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	ENSG00000164291|ENST00000380009|ARSK	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	508.930856	1523.77074	1.0387	0.0005286	5.9989	0.003053	7.0376	0.0035816	508.93308941440404	51.41	0.39979	52.804	52.468	52.868	1.3938	-0.15109	0.0034618	NaN	1.4551	23	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1070800			43384	3767	21268	21358							0.029804572908005866
YMVTIVHIY	9	Unmodified	_YMVTIVHIY_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.8018676638603	2	569.801903	1137.58925	0.76462	0.00043568	1.0522	0.00059955	1.8168	0.0010352	569.8023463257035	58.301	0.23613	59.719	59.609	59.845	1.4181					13	7	2	0	0	0	0.15478	1	24459	24459		38.151	0	1	3966700			43385	5058	21269	21359	50165	50165					0.025961442650668687
YMVTIVHIY	9	Unmodified	_YMVTIVHIY_					0	0	0		nc|ENSG00000198589|P50851-2|LRBA;ENSG00000198589|ENST00000651943|LRBA;nc|ENSG00000198589|P50851|LRBA	nc|ENSG00000198589|P50851-2|LRBA	nc|ENSG00000198589|P50851-2|LRBA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	569.801903	1137.58925	0.3838	0.00021869	4.8546	0.0027661	5.2384	0.0029848	569.804008603777	57.727	0.16026	59.696	59.654	59.814	1.969	-0.011918	0.0036203	NaN	38.151	8	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2994100			43386	5058	21269	21359							0.025961442650668687
YMYNEYHLSDC	11	Unmodified	_YMYNEYHLSDC_					0	0	0			REV__tr|A0A553SQH1|A0A553SQH1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07705PE=4SV=1	REV__tr|A0A553SQH1|A0A553SQH1_NIACIUncharacterizedproteinOS=NialliacirculansOX=1397GN=CEQ21_07705PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	719.2781860232353	2	719.27612	1436.53769	2.585	0.0018593	-0.21753	-0.00015647	2.3675	0.0017029	719.2766771056623	64.394	0.33163	65.801	65.591	65.923	1.4071					34	10	5	0	0	0	0.90709	1	26985	26985		9.3831	0	1	3507700	+		43387	15131	21270	21360	50166	50166					-0.16312012281809984
YNCFQSMNTF	10	Unmodified	_YNCFQSMNTF_					0	0	0			REV__nc|ENSG00000166845|Q8IYD9|LAS2	REV__nc|ENSG00000166845|Q8IYD9|LAS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	627.7527953982353	2	627.749541	1253.48453	1.9273	0.0012099	-0.21717	-0.00013633	1.7101	0.0010735	627.7495060793045	41.51	0.32058	42.836	42.715	43.035	1.3254					25	9	3	0	0	0	0.87699	1	17474	17474		3.9444	0	1	1085500	+		43388	10842	21271	21361	50167	50167					-0.13207345273826832
YNEMMVDR	8	Unmodified	_YNEMMVDR_					0	0	0			REV__ZNF850|p.S49Lfs*7|1|0.22|ENSG00000267041|chr19:36761733-36761733|A/-|frameshift_variant	REV__ZNF850|p.S49Lfs*7|1|0.22|ENSG00000267041|chr19:36761733-36761733|A/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	529.2266723513603	2	529.225702	1056.43685	NaN	NaN	NaN	NaN	NaN	NaN	NaN	18.365	1	18.538	18.038	19.038	0.17285								0	0	0	1.0178	1	7623	7623		2.0598	0	1		+		43389	11998	21272	21362	50168	50168					-0.08910999474005621
YNEYMKII	8	Oxidation (M)	_YNEYM(Oxidation (M))KII_		YNEYM(1)KII		YNEYM(42)KII	0	0	1			REV__tr|A0A7D6VQY6|A0A7D6VQY6_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_17150PE=4SV=1	REV__tr|A0A7D6VQY6|A0A7D6VQY6_9CLOTIronhydrogenasesmallsubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_17150PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	545.2687866091728	2	545.267893	1088.52123	2.9315	0.0015985	-1.6605	-0.00090544	1.271	0.00069302	545.2672827330591	82.551	0.34002	84.221	84.017	84.358	1.67					29	10	3	0	0	0	0.5808	2	34587	34587;34635		42.095	16.695	1	3268200	+		43390	15396	21273	21363	50169;50170	50169		126			-0.019487253855913877
YNFEKPVVM	9	Unmodified	_YNFEKPVVM_					0	0	0		ENST00000481488.1_1_2:148695657-148695951:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4;ENSG00000115947|ENST00000392857|ORC4;CON__Q2YDI2	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.7852661013603	2	563.78371	1125.55287	2.38	0.0013418	-0.9375	-0.00052855	1.4425	0.00081324	563.7836920783152	40.954	0.40887	42.279	42.084	42.493	1.3254					34	12	4	0	0	0	0.046715	2	17151	17151;17199		70.332	42.703	1	3378600		+	43391	356	21274	21364	50171;50172	50171					-0.004887326316520557
YNFEKPVVM	9	Unmodified	_YNFEKPVVM_					0	0	0		ENST00000481488.1_1_2:148695657-148695951:-|nuORF;nc|ENSG00000115947|O43929-2|ORC4;nc|ENSG00000115947|O43929-3|ORC4;ENSG00000115947|ENST00000392857|ORC4;CON__Q2YDI2	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	ENST00000481488.1_1_2:148695657-148695951:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7855102419853	2	563.78371	1125.55287	2.1467	0.0012103	-0.90546	-0.00051048	1.2412	0.00069979	563.7834371353504	40.577	0.3461	42.44	42.265	42.611	1.8624					28	10	4	0	0	0	0.046715	2	16990	16990;17043		70.332	47.596	1	3405300		+	43392	356	21274	21364	50173;50174	50173					-0.004887326316520557
YNFEYSVVF	9	Unmodified	_YNFEYSVVF_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2731201052666	2	584.27149	1166.52843	2.4892	0.0014544	-0.19252	-0.00011248	2.2966	0.0013419	584.2716945207953	76.329	0.39488	77.623	77.43	77.825	1.2938					29	12	4	0	0	0	0.49082	2	32038	32038;32085		15.847	7.1018	1	2817400			43393	4609	21275	21365	50175;50176	50175					-0.0481766951352256
YNFEYSVVF	9	Unmodified	_YNFEYSVVF_					0	0	0		nc|ENSG00000182220|O75787-2|ATP6AP2;ENSG00000182220|ENST00000636580|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	nc|ENSG00000182220|O75787-2|ATP6AP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2720825076103	2	584.27149	1166.52843	2.6873	0.0015701	-2.2935	-0.00134	0.3938	0.00023008	584.270018894591	75.829	0.39372	77.596	77.42	77.813	1.7672					29	12	3	0	0	0	0.49082	2	31794	31794;31842		15.847	8.558	1	1547800			43394	4609	21275	21365	50177;50178	50177					-0.0481766951352256
YNGWWSKKFS	10	Unmodified	_YNGWWSKKFS_					0	0	0			REV__CON__Q28107	REV__CON__Q28107	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8823119997978	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.927	1	55.327	54.827	55.827	1.4005								0	0	0	0.66227	1	22573	22573		0.62683	0.12087	1		+	+	43395	8386	21276	21366	50179	50179					-0.019437807453869027
YNIALSIAAI	10	Unmodified	_YNIALSIAAI_					0	0	0			REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	524.8071166872978	2	524.8055	1047.59645	1.7944	0.00094169	-0.99955	-0.00052457	0.79481	0.00041712	525.305202694916	46.439	0.24415	47.814	47.649	47.893	1.3751					9	7	2	0	0	0	0.12461	1	19475	19475		14.838	0	1	518650	+		43396	8754	21277	21367	50180	50180					0.07455200137133033
YNIALSIAAI	10	Unmodified	_YNIALSIAAI_					0	0	0			REV__ENSG00000074755|ENST00000381638|ZZEF1	REV__ENSG00000074755|ENST00000381638|ZZEF1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	524.8055	1047.59645	1.2538	0.000658	-0.25921	-0.00013603	0.9946	0.00052197	525.3061609914355	46.002	0.2122	47.973	47.821	48.033	1.9703	0.079157	0.00019387	NaN	14.838	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	497880	+		43397	8754	21277	21367							0.07455200137133033
YNIFSFTTFA	10	Unmodified	_YNIFSFTTFA_					0	0	0		Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.7947265505791	2	605.792589	1209.57063	2.9401	0.0017811	0.40826	0.00024732	3.3484	0.0020284	605.7932140732308	63.009	0.27862	64.422	64.254	64.533	1.4134					14	8	2	0	0	0	0.5476	1	26438	26438		25.399	0	1	879450			43398	7610	21278	21368	50181	50181					-0.025776941051390168
YNIFSFTTFA	10	Unmodified	_YNIFSFTTFA_					0	0	0		Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	Harlequin-int_dup372|chr10:84170027-84170994:-|2.0484706391337646|0.252139802420439|3.02|427.0|62|2|anti-sense	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	605.792589	1209.57063	2.9872	0.0018096	1.0775	0.00065272	4.0647	0.0024624	605.7933825966102	62.446	0.24695	64.403	64.267	64.514	1.9571	-0.0092643	0.00051848	NaN	25.399	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1360500			43399	7610	21278	21368							-0.025776941051390168
YNILRGIGKL	10	Unmodified	_YNILRGIGKL_					0	0	0		ENST00000525494.1_1_11:70016194-70034107:+|nuORF;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1;ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	ENST00000525494.1_1_11:70016194-70034107:+|nuORF	ENST00000525494.1_1_11:70016194-70034107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.8541137576103	2	573.853316	1145.69208	2.3644	0.0013568	0.35821	0.00020556	2.7226	0.0015624	573.8536487808485	47.58	0.32156	48.963	48.726	49.048	1.3825					16	9	2	0	0	0	0.72878	1	19920	19920		17.113	10.39	1	768710			43400	2497	21279	21369	50182	50182					0.12505973048041596
YNILRGIGKL	10	Unmodified	_YNILRGIGKL_					0	0	0		ENST00000525494.1_1_11:70016194-70034107:+|nuORF;nc|ENSG00000131620|Q5XXA6-2|ANO1;nc|ENSG00000131620|Q5XXA6-4|ANO1;ENSG00000131620|ENST00000355303|ANO1;nc|ENSG00000131620|Q5XXA6-5|ANO1	ENST00000525494.1_1_11:70016194-70034107:+|nuORF	ENST00000525494.1_1_11:70016194-70034107:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.8575317263603	2	573.853316	1145.69208	2.3643	0.0013568	1.0191	0.00058483	3.3834	0.0019416	573.854042830995	47.118	0.25514	49.094	48.87	49.125	1.976					13	7	2	0	0	0	0.60583	1	19685	19685		22.736	10.205	1	700300			43401	2497	21279	21369	50183	50183					0.12505973048041596
YNINMVEL	8	Unmodified	_YNINMVEL_					0	0	0			REV__tr|A0A7D7ABE5|A0A7D7ABE5_9CLOTHistidine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=hisSPE=3SV=1	REV__tr|A0A7D7ABE5|A0A7D7ABE5_9CLOTHistidine--tRNAligaseOS=ClostridiumintestinaleOX=36845GN=hisSPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	498.2487670779228	2	498.24696	994.479368	1.1353	0.00056564	2.549	0.00127	3.6842	0.0018357	498.24706709509775	68.959	0.3597	70.812	70.617	70.977	1.853					31	11	3	0	0	0	0.59872	1	28891	28891		40.449	4.3216	1	4703200	+		43402	15898	21280	21370	50184	50184					-0.01809281074122282
YNIQKKEI	8	Unmodified	_YNIQKKEI_					0	0	0		ENSG00000134371|ENST00000367435|CDC73	ENSG00000134371|ENST00000367435|CDC73	ENSG00000134371|ENST00000367435|CDC73	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	519.2963134646416	2	518.295299	1034.57605	3.3464	0.0017344	-0.24113	-0.00012498	3.1052	0.0016094	518.2952955667781	64.5	0.82807	65.907	65.591	66.419	1.4071					82	26	5	0	0	0	0.87276	1	27233	27233		13.508	4.1248	1	96406000			43403	2613	21281	21371	50185	50185					0.060140294773418645
YNIYWYQQKPG	11	Unmodified	_YNIYWYQQKPG_					0	0	0		nc|ENSG00000211654|A0A075B6J1|IGLV5-37	nc|ENSG00000211654|A0A075B6J1|IGLV5-37	nc|ENSG00000211654|A0A075B6J1|IGLV5-37	MSMS	GG20161007_CRH_Patient100_W632_02	4	730.3538085818291	2	730.353877	1458.6932	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.98	1	105.15	104.65	105.65	0.16679								0	0	0	0.63775	1	44557	44557		1.4819	0.15237	1				43404	7986	21282	21372	50186	50186					-0.01779857373753657
YNLGLDLR	8	Unmodified	_YNLGLDLR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion;GLUD2|p.A538S|1|0.14|ENSG00000182890|chrX:121049296-121049296|G/T|missense_variant	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	482.2674438357353	2	482.266542	962.51853	2.0845	0.0010053	0.19214	9.2665E-05	2.2767	0.001098	482.266588897756	46.026	1.6496	46.026	45.786	47.435	0					83	52	4	0	0	0	0.065974	9	19239	19199;19239;19276;19316;19352;19398;19448;19490;19548		99.799	43.258	1	27482000			43405	3217	21283	21373	50187;50188;50189;50190;50191;50192;50193;50194;50195	50188					0.03577187271741877
YNLGLDLR	8	Unmodified	_YNLGLDLR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion;GLUD2|p.A538S|1|0.14|ENSG00000182890|chrX:121049296-121049296|G/T|missense_variant	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	482.2677184939384	2	482.266542	962.51853	2.5511	0.0012303	-0.68649	-0.00033107	1.8646	0.00089924	482.26607536603893	45.502	0.4702	45.831	45.641	46.112	0.32899					44	15	4	0	0	0	0.065974	3	19105	19062;19105;19151		99.799	43.258	1	8045200			43406	3217	21283	21373	50196;50197;50198	50197					0.03577187271741877
YNLGLDLR	8	Unmodified	_YNLGLDLR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion;GLUD2|p.A538S|1|0.14|ENSG00000182890|chrX:121049296-121049296|G/T|missense_variant	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	482.2679015994072	2	482.266542	962.51853	2.3693	0.0011426	0.37552	0.0001811	2.7448	0.0013237	482.2666455036267	44.132	0.31481	45.486	45.315	45.63	1.3536					25	9	3	0	0	0	0.12697	2	18522	18477;18522		88.954	42.033	1	5483900			43407	3217	21283	21373	50199;50200	50200					0.03577187271741877
YNLGLDLR	8	Unmodified	_YNLGLDLR_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1;nc|ENSG00000148672|P00367-2|GLUD1;VTI1A-GLUD1|1|fusion;GLUD2|p.A538S|1|0.14|ENSG00000182890|chrX:121049296-121049296|G/T|missense_variant	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	482.2646667361259	2	482.266542	962.51853	1.9196	0.00092576	-2.744	-0.0013233	-0.82439	-0.00039758	482.2649681307455	43.517	0.26466	45.46	45.312	45.577	1.9438					19	8	3	0	0	0	0.36182	2	18222	18222;18272		62.573	26.528	1	3169500			43408	3217	21283	21373	50201;50202	50201					0.03577187271741877
YNLRKRIVFRK	11	Unmodified	_YNLRKRIVFRK_					0	0	0		nc|ENSG00000143473|O95259-2|KCNH1;ENSG00000143473|ENST00000271751|KCNH1	nc|ENSG00000143473|O95259-2|KCNH1	nc|ENSG00000143473|O95259-2|KCNH1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	374.1002685427666	4	373.986035	1491.91504	-0.92535	-0.00034607	-1.0838	-0.00040532	-2.0091	-0.00075138	374.2361691937709	31.786	0.38257	31.786	31.503	31.886	0					35	11	4	0	0	0	0.14606	1	13240	13240		0	0	1	1637200			43409	3035	21284	21374	50203	50203					0.1887546683308301
YNLVARYW	8	Unmodified	_YNLVARYW_					0	0	0		tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	tr|A0A553SQG2|A0A553SQG2_NIACIReversetranscriptasedomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_07645PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	542.2803832888603	2	542.782359	1083.55016	1.4429	0.00078317	-1.241	-0.00067362	0.20184	0.00010956	542.7816477353492	48.442	0.18199	49.83	49.774	49.956	1.388					8	5	2	0	0	0	2.3239	1	20279	20279		13.508	0	1	1735500			43410	16516	21285	21375	50204	50204					0.01173180025716647
YNQFQLAK	8	Unmodified	_YNQFQLAK_					0	0	0			REV__tr|A0A553SGK4|A0A553SGK4_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10985PE=3SV=1	REV__tr|A0A553SGK4|A0A553SGK4_NIACICarbohydrateABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_10985PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	506.7747985720634	2	506.266542	1010.51853	0.72254	0.0003658	2.8086	0.0014219	3.5311	0.0017877	506.26801068504176	13.831	0.33743	13.831	13.671	14.009	0					29	10	4	0	0	0	0.77833	1	5698	5698		23.148	2.6948	1	4413700	+		43411	14754	21286	21376	50205	50205					0.01369187271757255
YNQVQFKAL	9	Unmodified	_YNQVQFKAL_					0	0	0			REV__ENST00000398532.8_2_17:38292662-38292800:+|nuORF	REV__ENST00000398532.8_2_17:38292662-38292800:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	556.3011352419853	2	555.800749	1109.58694	1.7483	0.00097171	0.43892	0.00024395	2.1872	0.0012157	555.8029015924383	66.897	0.58935	68.286	67.996	68.586	1.3888					72	18	5	0	0	0	0.076627	1	28107	28107		57.471	23.07	1	19916000	+		43412	12871	21287	21377	50206	50206					0.03653431851603273
YNQVQFKAL	9	Unmodified	_YNQVQFKAL_					0	0	0			REV__ENST00000398532.8_2_17:38292662-38292800:+|nuORF	REV__ENST00000398532.8_2_17:38292662-38292800:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	556.2970458865166	2	555.800749	1109.58694	1.5797	0.00087801	0.78635	0.00043705	2.3661	0.0013151	555.8027180507968	66.379	0.70967	68.268	67.994	68.704	1.8889					70	22	5	0	0	0	0.09539	2	27909	27909;27951		50.855	25.456	1	20497000	+		43413	12871	21287	21377	50207;50208	50207					0.03653431851603273
YNQYNQDA	8	Unmodified	_YNQYNQDA_					0	0	0			REV__FHOD3|p.D1177Afs*10|1|0.13|ENSG00000134775|chr18:36747008-36747009|-/C|frameshift_variant	REV__FHOD3|p.D1177Afs*10|1|0.13|ENSG00000134775|chr18:36747008-36747009|-/C|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	339.1429321169853	3	339.142039	1014.40429	NaN	NaN	NaN	NaN	NaN	NaN	NaN	47.318	1	49.294	48.794	49.794	1.976								0	0	0	1.0178	1	19817	19817		0.45834	0	1		+		43414	9918	21288	21378	50209	50209					-0.10233747281006345
YNRRFTWPY	9	Unmodified	_YNRRFTWPY_					0	0	0			REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8833190798759	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	29.185	1	29.465	28.965	29.965	0.2793								0	0	0	0.42693	1	12216	12216		0.26902	0	1		+		43415	13478	21289	21379	50210	50210					-0.008209586512521128
YNRRFTWPY	9	Unmodified	_YNRRFTWPY_					0	0	0			REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8824951052666	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	28.101	1	29.38	28.88	29.88	1.2789								0	0	0	0.42693	1	11777	11777		0.26902	0.033176	1		+		43416	13478	21289	21379	50211	50211					-0.008209586512521128
YNRRFTWPY	9	Unmodified	_YNRRFTWPY_					0	0	0			REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	REV__ENST00000497284.1_1_1:74834737-74835372:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8834106326103	3	434.884123	1301.63054	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.18	1	14.008	13.508	14.508	0.82789								0	0	0	0.42693	1	5464	5464		0.26902	0	1		+		43417	13478	21289	21379	50212	50212					-0.008209586512521128
YNRRLLHN	8	Unmodified	_YNRRLLHN_					0	0	0		nc|ENSG00000174233|O43306-2|ADCY6;ENSG00000174233|ENST00000357869|ADCY6;ENST00000552099.5_1_12:49165333-49167571:-|nuORF;ENST00000547260.5_1_12:49165333-49167887:-|nuORF;nc|ENSG00000173175|O95622-2|ADCY5;ENSG00000173175|ENST00000462833|ADCY5	nc|ENSG00000174233|O43306-2|ADCY6	nc|ENSG00000174233|O43306-2|ADCY6	MSMS	GG20161007_CRH_Patient100_W632_01	3	543.3036376833916	2	543.301781	1084.58901	NaN	NaN	NaN	NaN	NaN	NaN	NaN	45.646	1	47.021	46.521	47.521	1.3751								0	0	0	1.0178	1	19121	19121		0.79363	0	1				43418	4324	21290	21380	50213	50213					0.050099053800977345
YNSVEKVWTL	10	Unmodified	_YNSVEKVWTL_					0	0	0			REV__nc|ENSG00000127311|Q8NG08-2|HELB	REV__nc|ENSG00000127311|Q8NG08-2|HELB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	619.8695556521416	2	619.824421	1237.63429	0.96944	0.00060088	-2.3913	-0.0014822	-1.4218	-0.00088128	619.8232014863154	77.614	0.42232	79.366	79.231	79.654	1.7514					21	13	3	0	0	0	0.12425	1	32547	32547		13.906	0	1	6187000	+		43419	9711	21291	21381	50214	50214					0.02497666331964865
YNVIQPIIF	9	Unmodified	_YNVIQPIIF_					0	0	0			REV__LDHB|p.K127N|1|0.33|ENSG00000111716|chr12:21643975-21643975|C/G|missense_variant	REV__LDHB|p.K127N|1|0.33|ENSG00000111716|chr12:21643975-21643975|C/G|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	553.8183471560478	2	553.815867	1105.61718	3.0972	0.0017153	0.38426	0.00021281	3.4815	0.0019281	553.8159976746151	82.303	0.68089	83.973	83.766	84.447	1.67					54	21	4	0	0	0	0.24063	1	34579	34579		28.487	4.4663	1	8075800	+		43420	14349	21292	21382	50215	50215					0.06859790516773501
YPAGGPCR	8	Unmodified	_YPAGGPCR_					0	0	0		ENST00000265537.7_1_3:45527184-45527256:+|nuORF	ENST00000265537.7_1_3:45527184-45527256:+|nuORF	ENST00000265537.7_1_3:45527184-45527256:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	410.6917297244072	2	410.692155	819.369758	0.45912	0.00018856	-3.1855	-0.0013083	-2.7264	-0.0011197	410.69062851279017	67.195	0.54819	67.195	66.924	67.473	0					48	17	3	0	0	0	0.89176	1	28065	28065		0.79363	0	1	34356000			43421	5655	21293	21383	50216	50216					-0.04715241902795242
YPDAYTTWNIL	11	Unmodified	_YPDAYTTWNIL_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	678.8332397341728	2	678.82716	1355.63977	2.3327	0.0015835	1.7794	0.0012079	4.112	0.0027914	678.8268900742205	80.494	0.55053	81.745	81.45	82.001	1.2512					32	17	2	0	0	0	0.1562	2	33728	33728;33780		45.7	34.876	1	3895600			43422	5086	21294	21384	50217;50218	50217					-0.02382654876214474
YPDAYTTWNIL	11	Unmodified	_YPDAYTTWNIL_					0	0	0		ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	ENSG00000198804|ENST00000361624|MT-CO1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	678.8290283083916	2	678.82716	1355.63977	0.783	0.00053152	1.45	0.00098432	2.233	0.0015158	678.827650978446	80	0.55251	81.717	81.444	81.996	1.7167					36	17	3	0	0	0	0.041084	3	33520	33520;33573;33622		69.105	43.706	1	2494200			43423	5086	21294	21384	50219;50220;50221	50219					-0.02382654876214474
YPDENKIFI	9	Unmodified	_YPDENKIFI_					0	0	0		tr|A0A7D6VU18|A0A7D6VU18_9CLOTCupindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05360PE=4SV=1	tr|A0A7D6VU18|A0A7D6VU18_9CLOTCupindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05360PE=4SV=1	tr|A0A7D6VU18|A0A7D6VU18_9CLOTCupindomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_05360PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.7944213747978	2	569.792589	1137.57063	2.2891	0.0013043	0.12377	7.0521E-05	2.4129	0.0013749	569.7924947848875	71.392	0.44997	72.733	72.392	72.842	1.3415					33	14	3	0	0	0	0.44535	1	29919	29919		18.135	0	1	15693000			43424	16938	21295	21385	50222	50222					0.0073430589486633835
YPDLMPIDVN	10	Unmodified	_YPDLMPIDVN_					0	0	0			REV__nc|ENSG00000292343|Q02040-2|AKAP17A	REV__nc|ENSG00000292343|Q02040-2|AKAP17A	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	588.7843505740166	2	588.783907	1175.55326	1.2185	0.00071741	0.1626	9.5737E-05	1.3811	0.00081315	588.784076048752	33.792	0.53629	34.089	33.791	34.327	0.29701					59	17	4	0	0	0	0.6819	1	14144	14144		19.257	1.1106	1	19551000	+		43425	11697	21296	21386	50223	50223					-0.027493577024642946
YPDLMPIDVN	10	Unmodified	_YPDLMPIDVN_					0	0	0			REV__nc|ENSG00000292343|Q02040-2|AKAP17A	REV__nc|ENSG00000292343|Q02040-2|AKAP17A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7841064333916	2	588.783907	1175.55326	0.60145	0.00035412	-0.25595	-0.0001507	0.3455	0.00020342	588.7839328273147	32.708	0.55731	33.986	33.67	34.227	1.2782					70	18	5	0	0	0	0.5476	1	13719	13719		25.399	7.253	1	47272000	+		43426	11697	21296	21386	50224	50224					-0.027493577024642946
YPDRIMNTF	9	Unmodified	_YPDRIMNTF_					0	0	0		ENST00000604929.1_1_9:140136931-140138005:+|nuORF;ENSG00000196230|ENST00000327892|TUBB;ENSG00000188229|ENST00000340384|TUBB4B;ENSG00000137285|ENST00000259818|TUBB2B;ENSG00000137267|ENST00000333628|TUBB2A;ENST00000518096.1_1_8:30209523-30210210:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3;ENSG00000258947|ENST00000315491|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF;nc|ENSG00000258947|Q13509-2|TUBB3	ENST00000604929.1_1_9:140136931-140138005:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.7772094607353	2	578.776416	1155.53828	1.9517	0.0011296	-2.7034	-0.0015647	-0.75171	-0.00043507	578.7750454179355	41.172	0.47289	43.064	42.768	43.241	1.8927					35	14	3	0	0	0	0.026411	3	17263	17163;17210;17263		93.166	25.957	1	3546100			43427	4854;5412	21297	21387	50225;50226;50227	50227					-0.033268047797946565
YPEEEELDDSE	11	Unmodified	_YPEEEELDDSE_					0	0	0			REV__tr|A0A553SJ30|A0A553SJ30_NIACITetratricopeptiderepeatproteinOS=NialliacirculansOX=1397GN=CEQ21_15980PE=4SV=1	REV__tr|A0A553SJ30|A0A553SJ30_NIACITetratricopeptiderepeatproteinOS=NialliacirculansOX=1397GN=CEQ21_15980PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	452.1771728396416	3	452.177143	1353.5096	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.82	1	110.87	110.37	111.37	0.047043								0	0	0	0.63775	1	47798	47798		0	0	1		+		43428	14880	21298	21388	50228	50228					-0.15301340456539947
YPEEISSMVL	10	Unmodified	_YPEEISSMVL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000173110|ENST00000309758|HSPA6;nc|ENSG00000225217|P48741|HSPA7	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1167.559619128704	1	1167.5602	1166.55293	2.634	0.0030753	-1.1004	-0.0012848	1.5335	0.0017905	1167.558876533118	65.248	0.31325	66.647	66.443	66.757	1.3989					19	9	3	0	0	0	0.22411	1	27372	27372		46.021	13.715	1	1571200			43429	5139;4266	21299	21389	50229	50229					-0.02368777422293533
YPEEISSMVL	10	Unmodified	_YPEEISSMVL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000173110|ENST00000309758|HSPA6;nc|ENSG00000225217|P48741|HSPA7	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2839843630791	2	584.28374	1166.55293	1.828	0.001068	-0.80046	-0.00046769	1.0275	0.00060035	584.2830711475546	64.704	0.408	66.632	66.487	66.895	1.928					18	12	2	0	0	0	0.32206	1	27188	27188		37.974	11.09	1	4576600			43430	5139;4266	21299	21389	50230	50230					-0.02368777422293533
YPEEISSMVL	10	Unmodified	_YPEEISSMVL_					0	0	0		ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000204389|ENST00000375651|HSPA1A;ENSG00000204388|ENST00000375650|HSPA1B;ENSG00000173110|ENST00000309758|HSPA6;nc|ENSG00000225217|P48741|HSPA7	ENSG00000204390|ENST00000375654|HSPA1L;ENSG00000173110|ENST00000309758|HSPA6	ENSG00000204390|ENST00000375654|HSPA1L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1167.5602	1166.55293	1.4589	0.0017034	-0.77608	-0.00090612	0.68282	0.00079723	1167.5592523010632	64.765	0.34677	66.693	66.487	66.834	1.928	0.023186	0.00014902	NaN	46.021	14	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1034300			43431	5139;4266	21299	21389							-0.02368777422293533
YPEELKPVL	9	Unmodified	_YPEELKPVL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3076049685478	2	544.305332	1086.59611	1.7283	0.00094072	0.63798	0.00034726	2.3663	0.001288	544.3051253428714	43.444	0.38781	44.798	44.559	44.947	1.3536					23	12	3	0	0	0	0.070055	1	18201	18201		60.074	16.216	1	1641000			43432	1001	21300	21390	50231	50231					0.056277804172850665
YPEELKPVL	9	Unmodified	_YPEELKPVL_					0	0	0		RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant;nc|ENSG00000080345|Q5UIP0-2|RIF1;ENSG00000080345|ENST00000444746|RIF1	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	RIF1|p.L2186Qfs*51|1|0.07|ENSG00000080345|chr2:151466077-151466077|T/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3073608279228	2	544.305332	1086.59611	1.8703	0.001018	1.8487	0.0010062	3.719	0.0020243	544.3064172032755	42.795	0.35855	44.716	44.601	44.96	1.9211					19	11	3	0	0	0	0.087723	1	17942	17942		53.404	15.228	1	1392500			43433	1001	21300	21390	50232	50232					0.056277804172850665
YPESVIQHL	9	Unmodified	_YPESVIQHL_					0	0	0		chr16:765223-765691|423|52.11|0.59|6.46|+|ENST00000563651|MSLN,MSLN;nc|ENSG00000102854|Q13421-4|MSLN;ENSG00000102854|ENST00000545450|MSLN;nc|ENSG00000102854|Q13421|MSLN;nc|ENSG00000102854|Q13421-2|MSLN	chr16:765223-765691|423|52.11|0.59|6.46|+|ENST00000563651|MSLN,MSLN	chr16:765223-765691|423|52.11|0.59|6.46|+|ENST00000563651|MSLN,MSLN	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	543.8240844607353	2	543.284931	1084.55531	2.2525	0.0012238	1.6358	0.0008887	3.8883	0.0021125	543.2863200615476	39.18	0.15729	40.476	40.382	40.54	1.2961					6	4	2	0	0	0	0.11611	1	16455	16455		10.074	2.7847	1	462280			43434	214	21301	21391	50233	50233					0.016414390976706272
YPETLGRLLIV	11	Unmodified	_YPETLGRLLIV_					0	0	0		ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	MSMS	GG20161007_CRH_Patient100_W632_01	3	637.3728515505791	2	637.379363	1272.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.162	1	97.446	96.946	97.946	0.28442								0	0	0	0.000268	1	40882	40882		66.457	6.3828	1				43435	1420	21302	21392	50234	50234					0.1187109167115068
YPETLGRLLIV	11	Unmodified	_YPETLGRLLIV_					0	0	0		ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	ENSG00000103184|ENST00000251170|SEC14L5	MSMS	GG20161007_CRH_Patient100_W632_02	4	637.3752319216728	2	637.379363	1272.74417	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.035	1	97.342	96.842	97.842	0.3062								0	0	0	3.4502E-07	1	40817	40817		75.761	15.687	1				43436	1420	21302	21392	50235	50235					0.1187109167115068
YPEVDHFVL	9	Unmodified	_YPEVDHFVL_					0	0	0		nc|ENSG00000164306|Q96LW4-2|PRIMPOL;ENSG00000164306|ENST00000314970|PRIMPOL	nc|ENSG00000164306|Q96LW4-2|PRIMPOL	nc|ENSG00000164306|Q96LW4-2|PRIMPOL	MSMS	GG20161007_CRH_Patient100_W632_02	4	559.7820922732353	2	559.779482	1117.54441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	49.44	1	51.418	50.918	51.918	1.9772								0	0	0	0.40188	1	20710	20710		8.5933	0	1				43437	3770	21303	21393	50236	50236					-0.009659632766215509
YPEVRIVLM	9	Unmodified	_YPEVRIVLM_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.3143188357353	2	560.315177	1118.6158	3.0006	0.0016813	0.1514	8.4833E-05	3.152	0.0017661	560.3157492450549	61.613	0.53088	63.031	62.834	63.365	1.4177					27	16	3	0	0	0	0.099302	2	25864	25812;25864		49.554	25.534	1	3270400			43438	2688	21304	21394	50237;50238	50238					0.061238331563799875
YPEVRIVLM	9	Unmodified	_YPEVRIVLM_					0	0	0		ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	ENSG00000135829|ENST00000367549|DHX9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	560.3165161013603	2	560.315177	1118.6158	2.5896	0.001451	1.5648	0.0008768	4.1544	0.0023278	560.316840253791	61.113	0.79993	63.078	62.482	63.282	1.9653					60	25	3	0	0	0	0.066197	3	25629	25580;25629;25674		61.602	38.453	1	3083700			43439	2688	21304	21394	50239;50240;50241	50240					0.061238331563799875
YPFIQGEHVL	10	Unmodified	_YPFIQGEHVL_					0	0	0		ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8162719607353	2	601.813856	1201.61316	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.026	1	52.42	51.92	52.92	1.3938								0	0	0	0.0018248	1	21363	21363		70.332	37.546	1				43440	3856	21305	21395	50242	50242					0.020417010230858068
YPFIQGEHVL	10	Unmodified	_YPFIQGEHVL_					0	0	0		ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	ENSG00000165757|ENST00000375377|JCAD	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.8129760622978	2	601.813856	1201.61316	0.63618	0.00038286	0.27593	0.00016606	0.91211	0.00054892	601.81422017153	50.601	0.39246	52.576	52.365	52.757	1.9753					24	12	3	0	0	0	0.11344	1	21213	21213		61.602	28.816	1	1399400			43441	3856	21305	21395	50243	50243					0.020417010230858068
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	408.5666686892509	3	408.56562	1222.67503	1.5995	0.0006535	1.6058	0.00065607	3.2053	0.0013096	408.5663627357846	45.78	0.66186	47.155	46.768	47.43	1.3751					36	20	2	0	0	0	0.62631	1	19205	19205		21.799	10.901	1	814880			43442	237	21306	21396	50244	50244					0.07260052442211418
YPFKPPKVTF	10	Unmodified	_YPFKPPKVTF_					0	0	0		chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3;ENSG00000170035|ENST00000410062|UBE2E3;ENST00000411687.1_1_X:14262689-14263010:+|nuORF;ENST00000493707.1_1_3:23907959-23932094:+|nuORF;ENST00000475680.5_1_3:23852460-23932094:+|nuORF;nc|ENSG00000170142|P51965-2|UBE2E1;nc|ENSG00000170142|P51965-3|UBE2E1;ENSG00000170142|ENST00000306627|UBE2E1;ENSG00000182247|ENST00000396703|UBE2E2	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	chr2:180980546-180980942|416|11.89|0.09|7.01|+|ENST00000602479|UBE2E3,UBE2E3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	408.56562	1222.67503	1.577	0.00064432	1.043	0.00042612	2.62	0.0010704	408.56603829909403	45.292	0.72549	47.251	46.831	47.556	1.9596	0.047973	-0.00033533	NaN	21.799	39	22	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	829810			43443	237	21306	21396							0.07260052442211418
YPFSTSVKL	9	Unmodified	_YPFSTSVKL_					0	0	0		nc|ENSG00000150687|O95084-2|PRSS23;ENSG00000150687|ENST00000280258|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	521.2856323122978	2	521.2844	1040.55425	2.3664	0.0012336	0.46955	0.00024477	2.8359	0.0014783	521.2845070843579	47.205	0.83055	48.587	48.187	49.017	1.3825					70	25	4	0	0	0	0.0070725	4	19808	19718;19769;19808;19854		114.2	72.107	1	6809700			43444	3270	21307	21397	50245;50246;50247;50248	50247					0.0355922472876955
YPFSTSVKL	9	Unmodified	_YPFSTSVKL_					0	0	0		nc|ENSG00000150687|O95084-2|PRSS23;ENSG00000150687|ENST00000280258|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	nc|ENSG00000150687|O95084-2|PRSS23	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	521.2853271365166	2	521.2844	1040.55425	1.9218	0.0010018	0.68622	0.00035771	2.6081	0.0013595	521.2846137386042	46.76	0.80539	48.736	48.289	49.094	1.976					63	25	3	0	0	0	0.026734	3	19577	19525;19577;19627		92.653	40.69	1	6039900			43445	3270	21307	21397	50249;50250;50251	50250					0.0355922472876955
YPGGGGGG	8	Unmodified	_YPGGGGGG_					0	0	0		ENSG00000185668|ENST00000373012|POU3F1	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1356689333916	2	311.134996	620.255439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.79	1	111.83	111.33	112.33	0.04554								0	0	0	1.0178	1	48194	48194		0.79363	0	1		+		43446	10248	21308	21398	50252	50252					-0.06987808393228079
YPGGGGGG	8	Unmodified	_YPGGGGGG_					0	0	0		ENSG00000185668|ENST00000373012|POU3F1	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	REV__nc|ENSG00000144406|Q8N2C7-7|UNC80	MSMS	GG20161007_CRH_Patient100_A02_02	2	311.1353027224541	2	311.134996	620.255439	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.91	1	111.96	111.46	112.46	0.04554								0	0	0	1.0178	1	48246	48246		0.79363	0	1		+		43447	10248	21308	21398	50253	50253					-0.06987808393228079
YPIEKFISL	9	Unmodified	_YPIEKFISL_					0	0	0		ENST00000539508.5_1_9:13106966-13133978:-|nuORF;nc|ENSG00000107186|O75970-5|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-2|MPDZ;ENSG00000107186|ENST00000319217|MPDZ	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.3176757693291	2	555.3157	1108.61685	2.6367	0.0014642	0.33385	0.00018539	2.9706	0.0016496	555.3156355674273	64.232	1.0244	65.64	64.869	65.894	1.4071					63	32	3	0	0	0	0.060242	1	26981	26981		63.961	9.187	1	2012000			43448	1593	21309	21399	50254	50254					0.06688370796950949
YPIEKFISL	9	Unmodified	_YPIEKFISL_					0	0	0		ENST00000539508.5_1_9:13106966-13133978:-|nuORF;nc|ENSG00000107186|O75970-5|MPDZ;nc|ENSG00000107186|O75970-3|MPDZ;nc|ENSG00000107186|O75970-2|MPDZ;ENSG00000107186|ENST00000319217|MPDZ	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	ENST00000539508.5_1_9:13106966-13133978:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.3176147341728	2	555.3157	1108.61685	2.6504	0.0014718	0.25403	0.00014107	2.9044	0.0016129	555.3157931570753	63.611	0.93843	65.556	64.905	65.843	1.9444					56	29	3	0	0	0	0.060242	1	26711	26711		63.961	5.2817	1	2124900			43449	1593	21309	21399	50255	50255					0.06688370796950949
YPKLRELI	8	Unmodified	_YPKLRELI_					0	0	0		ENSG00000145388|ENST00000388822|METTL14	ENSG00000145388|ENST00000388822|METTL14	ENSG00000145388|ENST00000388822|METTL14	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.3152953982353	2	516.316035	1030.61752	2.9571	0.0015268	-3.0316	-0.0015652	-0.07441	-3.8419E-05	516.3141782251407	82.671	0.55691	84.341	84.017	84.574	1.67					63	17	5	0	0	0	0.89124	1	34748	34748		2.8892	0	1	55490000			43450	3109	21310	21400	50256	50256					0.10343210236646883
YPLDLLLKL	9	Unmodified	_YPLDLLLKL_					0	0	0		ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENSG00000196655|ENST00000533632|TRAPPC4	ENST00000531290.5_1_11:118889505-118889751:+|nuORF	ENST00000531290.5_1_11:118889505-118889751:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.3439208865166	2	544.341718	1086.66888	3.7146	0.002022	0.68723	0.00037409	4.4018	0.0023961	544.3423273157525	86.846	0.49467	87.938	87.685	88.179	1.0918					30	17	2	0	0	0	0.070055	1	36627	36627		60.074	25.971	1	3973800			43451	4955	21311	21401	50257	50257					0.12901534210709542
YPLDLLLKL	9	Unmodified	_YPLDLLLKL_					0	0	0		ENST00000531290.5_1_11:118889505-118889751:+|nuORF;nc|ENSG00000196655|Q9Y296-2|TRAPPC4;ENST00000447216.2_1_11:118889505-118891019:+|nuORF;ENSG00000196655|ENST00000533632|TRAPPC4	ENST00000531290.5_1_11:118889505-118889751:+|nuORF	ENST00000531290.5_1_11:118889505-118889751:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	544.3453246951103	2	544.341718	1086.66888	4.1395	0.0022533	-0.6396	-0.00034816	3.4999	0.0019051	544.3416297139631	86.336	0.56066	87.883	87.584	88.145	1.547					30	20	2	0	0	0	0.053939	1	36417	36417		66.457	30.412	1	2982200			43452	4955	21311	21401	50258	50258					0.12901534210709542
YPLIAFIL	8	Unmodified	_YPLIAFIL_					0	0	0		tr|A0A553SIT7|A0A553SIT7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_15440PE=4SV=1	tr|A0A553SIT7|A0A553SIT7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_15440PE=4SV=1	tr|A0A553SIT7|A0A553SIT7_NIACIABCtransporterpermeaseOS=NialliacirculansOX=1397GN=CEQ21_15440PE=4SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	317.1968566775322	3	317.196757	948.568441	NaN	NaN	NaN	NaN	NaN	NaN	NaN	101.83	1	101.83	101.33	102.33	0								0	0	0	1.0178	1	42646	42646		0	0	1				43453	16219	21312	21402	50259	50259					0.09209921947717703
YPLITMDLI	9	Unmodified	_YPLITMDLI_					0	0	0		tr|A0A7D6VTC5|A0A7D6VTC5_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_20710PE=4SV=1	tr|A0A7D6VTC5|A0A7D6VTC5_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_20710PE=4SV=1	tr|A0A7D6VTC5|A0A7D6VTC5_9CLOTProbablemultidrugresistanceproteinNorMOS=ClostridiumintestinaleOX=36845GN=HZF06_20710PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	539.7961303591728	2	539.796286	1077.57802	4.2982	0.0023202	-3.2791	-0.00177	1.0192	0.00055014	539.7947130132756	93.835	0.44507	94.707	94.481	94.926	0.87176					22	13	2	0	0	0	0.66839	1	39502	39502		8.5933	2.2392	1	667110			43454	16914	21313	21403	50260	50260					0.04233322170921383
YPLIVHAR	8	Unmodified	_YPLIVHAR_					0	0	0			REV__tr|A0A553SHN8|A0A553SHN8_NIACIAdenylosuccinatesynthetaseOS=NialliacirculansOX=1397GN=purAPE=3SV=1	REV__tr|A0A553SHN8|A0A553SHN8_NIACIAdenylosuccinatesynthetaseOS=NialliacirculansOX=1397GN=purAPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	486.2925292849541	2	484.787444	967.560336	1.478	0.0007165	0.80929	0.00039233	2.2873	0.0011088	484.7877921975363	24.654	0.2954	25.895	25.732	26.028	1.241					27	9	4	0	0	0	0.88663	1	10309	10309		4.756	2.1785	1	9010000	+		43455	14804	21314	21404	50261	50261					0.07525787750932977
YPLKKVIV	8	Unmodified	_YPLKKVIV_					0	0	0			REV__nc|ENSG00000184908|P51801-2|CLCNKB	REV__nc|ENSG00000184908|P51801-2|CLCNKB	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	479.7678100466728	2	480.318046	958.621539	2.7595	0.0013254	-0.043252	-2.0775E-05	2.7162	0.0013046	480.3178758677074	69.759	0.44456	71.597	71.404	71.849	1.8378					30	13	3	0	0	0	2.3239	1	29336	29336		10.183	4.9527	1	3918500	+		43456	8360	21315	21405	50262	50262					0.14057299730370687
YPLRYSTI	8	Unmodified	_YPLRYSTI_					0	0	0		ENSG00000181074|ENST00000641350|OR52N4	ENSG00000181074|ENST00000641350|OR52N4	ENSG00000181074|ENST00000641350|OR52N4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	507.2409240603447	2	506.776742	1011.53893	1.8286	0.00092669	0.26552	0.00013456	2.0941	0.0010613	506.777669634698	71.474	0.15862	73.298	73.191	73.349	1.824					5	4	2	0	0	0	2.3239	1	29957	29957		15.768	0	1	265430			43457	4567	21316	21406	50263	50263					0.03362357931564475
YPNERFELL	9	Unmodified	_YPNERFELL_					0	0	0		ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8044311404228	2	590.803488	1179.59242	0.91281	0.00053929	2.438	0.0014404	3.3508	0.0019797	590.8033865485215	50.971	0.8201	52.365	52.016	52.836	1.3938					50	26	3	0	0	0	0.030128	1	21408	21408		87.258	41.559	1	6133300			43458	3739	21317	21407	50264	50264					0.009811106434199246
YPNERFELL	9	Unmodified	_YPNERFELL_					0	0	0		ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	ENSG00000163960|ENST00000296328|UBXN7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	591.3036376833916	2	590.803488	1179.59242	1.2752	0.00075337	0.15207	8.9842E-05	1.4272	0.00084321	590.8030353167908	50.294	0.81352	52.272	52.007	52.821	1.9772					34	26	2	0	0	0	0.10095	1	21258	21258		22.736	5.6234	1	5695300			43459	3739	21317	21407	50265	50265					0.009811106434199246
YPNGLQVNF	9	Unmodified	_YPNGLQVNF_					0	0	0		ENST00000526194.5_1_1:21560049-21616919:-|nuORF;ECE1|p.T697Pfs*6|1|0.03|ENSG00000117298|chr1:21221793-21221794|GT/-|frameshift_variant;nc|ENSG00000117298|P42892-3|ECE1;nc|ENSG00000117298|P42892-4|ECE1;ENSG00000117298|ENST00000374893|ECE1;ECE1|p.R176Qfs*12|1|0.04|ENSG00000117298|chr1:21260360-21260361|-/TG|frameshift_variant	ENST00000526194.5_1_1:21560049-21616919:-|nuORF	ENST00000526194.5_1_1:21560049-21616919:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	526.2639037966728	2	526.263999	1050.51345	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.612	1	58.581	58.081	59.081	1.9684								0	0	0	0.26021	1	23745	23745		21.747	3.6003	1				43460	438	21318	21408	50266	50266					-0.0097911659086094
YPNTYIFDL	9	Unmodified	_YPNTYIFDL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.2822143435478	2	573.279315	1144.54408	2.7375	0.0015694	0.44128	0.00025298	3.1788	0.0018224	573.2790592817655	78.808	0.46778	80.075	79.817	80.284	1.2668					30	14	3	0	0	0	0.04145	1	33083	33083		74.929	22.661	1	1425500			43461	1315	21319	21409	50267	50267					-0.022413829964762044
YPNTYIFDL	9	Unmodified	_YPNTYIFDL_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	573.279315	1144.54408	2.1227	0.0012169	2.6787	0.0015357	4.8015	0.0027526	573.2802668609789	78.271	0.43375	80.006	79.855	80.289	1.735	-0.034488	0.0011387	NaN	74.929	25	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1600000			43462	1315	21319	21409							-0.022413829964762044
YPNTYIFDLF	10	Unmodified	_YPNTYIFDLF_					0	0	0		ENSG00000100991|ENST00000252015|TRPC4AP;nc|ENSG00000100991|Q8TEL6-3|TRPC4AP;nc|ENSG00000100991|Q8TEL6-2|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	ENSG00000100991|ENST00000252015|TRPC4AP	MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8177368044853	2	646.813522	1291.61249	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.86	1	97.166	96.666	97.666	0.3062								0	0	0	1.2047E-08	1	40743	40743		114.65	80.547	1				43463	1315	21320	21410	50268	50268					-0.021651384166261778
YPNYMIINL	9	Unmodified	_YPNYMIINL_					0	0	0		ENSG00000088451|ENST00000261296|TGDS	ENSG00000088451|ENST00000261296|TGDS	ENSG00000088451|ENST00000261296|TGDS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.7932617068291	2	570.791535	1139.56852	2.6866	0.0015335	1.3971	0.00079745	4.0837	0.002331	570.7923265210974	79.958	0.4001	81.209	81.017	81.417	1.2512					27	12	3	0	0	0	0.49082	1	33577	33577		15.847	0	1	953060			43464	1103	21321	21411	50269	50269					0.0043155388543709705
YPNYMIINL	9	Unmodified	_YPNYMIINL_					0	0	0		ENSG00000088451|ENST00000261296|TGDS	ENSG00000088451|ENST00000261296|TGDS	ENSG00000088451|ENST00000261296|TGDS	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.7941772341728	2	570.791535	1139.56852	1.6857	0.00096221	0.9089	0.00051879	2.5946	0.001481	570.7919846307487	79.422	0.46088	81.138	80.952	81.413	1.7167					27	14	3	0	0	0	0.39927	1	33299	33299		20.454	4.6064	1	832740			43465	1103	21321	21411	50270	50270					0.0043155388543709705
YPPLDNVL	8	Unmodified	_YPPLDNVL_					0	0	0			REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	465.7512390017509	2	465.750193	929.485833	1.3346	0.0006216	0.63308	0.00029486	1.9677	0.00091646	465.7504747363999	22.295	0.31473	23.472	23.321	23.635	1.177					28	9	4	0	0	0	0.5808	1	9340	9340		42.095	0	1	5426600	+		43466	14603	21322	21412	50271	50271					0.01826980148905477
YPPLDNVL	8	Unmodified	_YPPLDNVL_					0	0	0			REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	465.7507507205009	2	465.750193	929.485833	0.80128	0.00037319	0.1848	8.6071E-05	0.98608	0.00045926	465.75029639702416	21.917	0.29643	23.532	23.377	23.674	1.6158					24	9	3	0	0	0	0.5808	1	9159	9159		42.095	2.1372	1	6161600	+		43467	14603	21322	21412	50272	50272					0.01826980148905477
YPPLDNVL	8	Unmodified	_YPPLDNVL_					0	0	0			REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	465.750193	929.485833	1.3116	0.0006109	0.61011	0.00028416	1.9218	0.00089506	465.75047904294036	23.306	0.30451	23.306	23.139	23.444	0	-0.14167	0.00010332	NaN	42.095	23	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2951500	+		43468	14603	21322	21412							0.01826980148905477
YPPLDNVL	8	Unmodified	_YPPLDNVL_					0	0	0			REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	465.750193	929.485833	1.3346	0.0006216	0.63308	0.00029486	1.9677	0.00091646	465.7504747363999	22.295	0.31473	23.472	23.321	23.635	1.177	0.025044	0.00012471	NaN	42.095	28	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5426600	+		43469	14603	21322	21412							0.01826980148905477
YPPLDNVL	8	Unmodified	_YPPLDNVL_					0	0	0			REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	REV__PPARD|p.G234D|1|0.04|ENSG00000112033|chr6:35424402-35424402|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	465.750193	929.485833	0.80128	0.00037319	0.1848	8.6071E-05	0.98608	0.00045926	465.75029639702416	21.917	0.29643	23.532	23.377	23.674	1.6158	0.085258	-0.00029286	NaN	42.095	24	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6161600	+		43470	14603	21322	21412							0.01826980148905477
YPPRWALL	8	Unmodified	_YPPRWALL_					0	0	0		ENST00000357635.9_1_15:75194880-75195063:-|nuORF	ENST00000357635.9_1_15:75194880-75195063:-|nuORF	ENST00000357635.9_1_15:75194880-75195063:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	508.2912475466728	2	508.28982	1014.56509	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.978	1	44.978	44.478	45.478	0								0	0	0	1.0178	1	18823	18823		6.3541	0	1				43471	6000	21323	21413	50273	50273					0.058386718937072146
YPPVQVLF	8	Unmodified	_YPPVQVLF_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	481.7723266482353	2	481.770929	961.527304	3.609	0.0017387	-2.3345	-0.0011247	1.2745	0.00061401	481.77032919259904	73.67	0.56314	74.988	74.685	75.248	1.318					32	17	3	0	0	0	0.56817	1	30936	30936		42.968	14.795	1	1464200			43472	1949	21324	21414	50274	50274					0.045001609082419236
YPPVQVLF	8	Unmodified	_YPPVQVLF_					0	0	0		nc|ENSG00000116062|P52701-2|MSH6;nc|ENSG00000116062|P52701-3|MSH6;ENSG00000116062|ENST00000234420|MSH6;nc|ENSG00000116062|P52701-4|MSH6	nc|ENSG00000116062|P52701-2|MSH6	nc|ENSG00000116062|P52701-2|MSH6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	481.7719909548759	2	481.770929	961.527304	2.4536	0.0011821	-2.8101	-0.0013538	-0.35644	-0.00017172	481.77040509386273	73.146	0.50592	74.956	74.671	75.177	1.8101					26	15	2	0	0	0	0.56817	1	30702	30702		42.968	14.795	1	1173100			43473	1949	21324	21414	50275	50275					0.045001609082419236
YPPWGACWF	9	Unmodified	_YPPWGACWF_					0	0	0		ENST00000339728.5_1_2:235403839-235404196:-|nuORF	ENST00000339728.5_1_2:235403839-235404196:-|nuORF	ENST00000339728.5_1_2:235403839-235404196:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7448608279228	2	563.744388	1125.47422	2.4525	0.0013826	-1.8317	-0.0010326	0.62085	0.00035	563.7434012499587	84.504	0.36594	86.1	85.945	86.311	1.5962					18	11	3	0	0	0	0.64949	1	35430	35430		9.3474	0	1	1007000			43474	5927	21325	21415	50276	50276					-0.0834954014608229
YPPWGACWF	9	Unmodified	_YPPWGACWF_					0	0	0		ENST00000339728.5_1_2:235403839-235404196:-|nuORF	ENST00000339728.5_1_2:235403839-235404196:-|nuORF	ENST00000339728.5_1_2:235403839-235404196:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	563.744388	1125.47422	2.2987	0.0012959	-1.9416	-0.0010946	0.35717	0.00020135	563.7431546175899	84.963	0.30768	86.122	85.995	86.303	1.159	0.01109	-3.0854E-05	NaN	9.3474	22	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	810480			43475	5927	21325	21415							-0.0834954014608229
YPQFEQSE	8	Unmodified	_YPQFEQSE_					0	0	0		ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3;ENSG00000136231|ENST00000258729|IGF2BP3	ENST00000341855.4_1_7:56665180-56665615:+|nuORF	ENST00000341855.4_1_7:56665180-56665615:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	514.2205078005791	2	514.221997	1026.42944	0.34477	0.00017729	-4.2045	-0.0021621	-3.8598	-0.0019848	514.219827636073	12.722	0.27436	12.812	12.648	12.922	0.08938					18	8	3	0	0	0	0.80889	1	5283	5283		20.454	2.3186	1	610920			43476	2713	21326	21416	50277	50277					-0.08271692478410841
YPQFEQSE	8	Unmodified	_YPQFEQSE_					0	0	0		ENST00000341855.4_1_7:56665180-56665615:+|nuORF;nc|ENSG00000136231|O00425-2|IGF2BP3;ENSG00000136231|ENST00000258729|IGF2BP3	ENST00000341855.4_1_7:56665180-56665615:+|nuORF	ENST00000341855.4_1_7:56665180-56665615:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	514.221997	1026.42944	0.40915	0.0002104	-3.3033	-0.0016986	-2.8942	-0.0014882	514.2200982524632	12.156	0.15807	12.944	12.876	13.034	0.78751	0.06603	0.00048265	NaN	20.454	6	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	260920			43477	2713	21326	21416							-0.08271692478410841
YPQFGEVVL	9	Unmodified	_YPQFGEVVL_					0	0	0		nc|ENSG00000138759|Q86XX4-5|FRAS1;nc|ENSG00000138759|Q86XX4|FRAS1;ENSG00000138759|ENST00000512123|FRAS1	nc|ENSG00000138759|Q86XX4-5|FRAS1	nc|ENSG00000138759|Q86XX4-5|FRAS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1051.551684558392	1	1051.54587	1050.5386	3.0928	0.0032522	0.21748	0.00022869	3.3103	0.0034809	1051.546767008825	70.45	0.41714	71.804	71.552	71.97	1.3536					17	12	2	0	0	0	0.20244	1	29547	29547		32.786	9.6373	1	1106300			43478	2853	21327	21417	50278	50278					0.015349382117165078
YPRERTHLT	9	Unmodified	_YPRERTHLT_					0	0	0			REV__nc|ENSG00000083828|Q9NXT0-3|ZNF586	REV__nc|ENSG00000083828|Q9NXT0-3|ZNF586	MSMS	GG20161007_CRH_Patient100_A02_02	2	586.8104736208916	2	586.812179	1171.60981	NaN	NaN	NaN	NaN	NaN	NaN	NaN	66.332	1	66.657	66.157	67.157	0.32449								0	0	0	0.42693	1	27769	27769		4.756	0.81161	1		+		43479	8835	21328	21418	50279	50279					0.030864509690900377
YPRKRNSL	8	Unmodified	_YPRKRNSL_					0	0	0		ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	ENSG00000159459|ENST00000290650|UBR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	517.7992431521416	2	517.298707	1032.58286	2.0797	0.0010758	-3.9371	-0.0020367	-1.8574	-0.00096083	517.7974280338769	54.266	0.31589	56.234	56.032	56.348	1.9684					16	9	2	0	0	0	0.59872	1	22732	22732		40.449	14.18	1	7985600			43480	3531	21329	21419	50280	50280					0.06787387148574453
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	507.9603454470634	3	507.961144	1520.8616	1.6272	0.00082658	0.16765	8.516E-05	1.7949	0.00091174	507.96126599349805	32.938	0.37156	32.938	32.751	33.122	0					26	12	3	0	0	0	0.98969	1	13762	13762		4.4062	3.0765	1	949170	+		43481	9429	21330	21420	50281	50281					0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	507.9622985720634	3	507.961144	1520.8616	1.5069	0.00076545	0.88265	0.00044835	2.3896	0.0012138	508.2956098511804	32.1	0.95427	32.394	32.185	33.139	0.29431					75	30	4	0	0	0	1.0224	4	13464	13464;13520;13567;13648		2.4348	1.9288	1	2191100	+		43482	9429	21330	21420	50282;50283;50284;50285	50282					0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	507.9628173708916	3	507.961144	1520.8616	1.0803	0.00054873	1.3113	0.00066607	2.3915	0.0012148	507.9618212675483	31.006	0.77989	32.287	31.934	32.714	1.2813					50	24	3	0	0	0	1.0365	2	12928	12928;12978		1.2148	0.70888	1	1022000	+		43483	9429	21330	21420	50286;50287	50286					0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	507.9618408083916	3	507.961144	1520.8616	0.95119	0.00048317	1.5365	0.00078049	2.4877	0.0012637	507.9617807966506	30.244	0.52728	32.06	31.892	32.419	1.8151					28	16	3	0	0	0	1.0365	1	12690	12690		1.2148	0.70888	1	1560400	+		43484	9429	21330	21420	50288	50288					0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		3	507.961144	1520.8616	1.6272	0.00082658	0.16765	8.516E-05	1.7949	0.00091174	507.96126599349805	32.938	0.37156	32.938	32.751	33.122	0	0	0	NaN	4.4062	26	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	949170	+		43485	9429	21330	21420							0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		3	507.961144	1520.8616	1.5069	0.00076545	0.88265	0.00044835	2.3896	0.0012138	508.2956098511804	32.1	0.95427	32.394	32.185	33.139	0.29431	0.14746	-0.00042851	NaN	2.4348	75	30	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2191100	+		43486	9429	21330	21420							0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	507.961144	1520.8616	1.0803	0.00054873	1.3113	0.00066607	2.3915	0.0012148	507.9618212675483	31.006	0.77989	32.287	31.934	32.714	1.2813	0.039959	0.00022464	NaN	2.4348	50	24	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1022000	+		43487	9429	21330	21420							0.12200669330582059
YPRRLDWFKIK	11	Unmodified	_YPRRLDWFKIK_					0	0	0			REV__ENSG00000115207|ENST00000264720|GTF3C2	REV__ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	507.961144	1520.8616	0.95119	0.00048317	1.5365	0.00078049	2.4877	0.0012637	507.9617807966506	30.244	0.52728	32.06	31.892	32.419	1.8151	-0.18742	0.0005679	NaN	2.4348	28	16	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1560400	+		43488	9429	21330	21420							0.12200669330582059
YPSEFATYL	9	Unmodified	_YPSEFATYL_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENST00000581108.5_1_17:80207265-80210400:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.7603637576103	2	545.758215	1089.50188	2.2991	0.0012548	1.4876	0.00081189	3.7868	0.0020667	545.7591020073473	64.043	0.41639	65.45	65.144	65.56	1.4071					19	12	2	0	0	0	0.19075	1	26838	26838		34.102	9.4286	1	2273300			43489	2967	21331	21421	50289	50289					-0.03929358404866434
YPSEFATYL	9	Unmodified	_YPSEFATYL_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENST00000581108.5_1_17:80207265-80210400:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1090.513720691204	1	1090.50915	1089.50188	2.0941	0.0022837	1.2074	0.0013167	3.3015	0.0036003	1090.5109190698215	63.978	0.38592	65.385	65.174	65.56	1.4071					20	11	2	0	0	0	0.069258	1	26840	26840		60.39	15.983	1	1364600			43490	2967	21331	21421	50290	50290					-0.03929358404866434
YPSEFATYL	9	Unmodified	_YPSEFATYL_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENST00000581108.5_1_17:80207265-80210400:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1090.50915	1089.50188	2.7783	0.0030297	-0.36132	-0.00039402	2.417	0.0026357	1090.509611037558	63.456	0.38403	65.4	65.183	65.567	1.9444	0.007822	-0.00098204	NaN	60.39	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	936980			43491	2967	21331	21421							-0.03929358404866434
YPSEFATYL	9	Unmodified	_YPSEFATYL_					0	0	0		ENST00000578904.1_1_17:80208040-80213403:-|nuORF;nc|ENSG00000141551|P48730-2|CSNK1D;ENSG00000141551|ENST00000314028|CSNK1D;WDR45L-CSNK1D|1|fusion;WDR45L-CSNK1D|2|fusion;ENST00000581108.5_1_17:80207265-80210400:-|nuORF;ENST00000584377.5_1_17:80203885-80211156:-|nuORF;ENST00000581241.5_1_17:80206597-80211051:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	ENST00000578904.1_1_17:80208040-80213403:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	545.758215	1089.50188	2.5779	0.0014069	-0.44573	-0.00024326	2.1322	0.0011637	545.7585663433736	63.482	0.44602	65.426	65.152	65.598	1.9444	-0.011987	-0.0010705	NaN	34.102	21	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1362400			43492	2967	21331	21421							-0.03929358404866434
YPSYMNRYFEE	11	Unmodified	_YPSYMNRYFEE_					0	0	0		tr|A0A553SNU4|A0A553SNU4_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_25045PE=3SV=1	tr|A0A553SNU4|A0A553SNU4_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_25045PE=3SV=1	tr|A0A553SNU4|A0A553SNU4_NIACIGlycosidehydrolasefamily1proteinOS=NialliacirculansOX=1397GN=CEQ21_25045PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	499.8879882693291	3	500.215098	1497.62347	0.54432	0.00027227	0.94275	0.00047158	1.4871	0.00074385	500.2161142279157	16.165	0.76067	16.165	16.024	16.785	0					72	23	5	0	0	0	0.14606	1	6672	6672		2.084	0	1	6306300			43493	16436	21332	21422	50291	50291					-0.10544104104656071
YPTAKRMREKW	11	Unmodified	_YPTAKRMREKW_					0	0	0			REV__ENSG00000183559|ENST00000329446|C10orf120	REV__ENSG00000183559|ENST00000329446|C10orf120	MSMS	GG20161007_CRH_Patient100_W632_01	3	733.3877441287041	2	733.390271	1464.76599	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.981	1	53.377	52.877	53.877	1.3966								0	0	0	0.63775	1	21764	21764		6.2058	2.6093	1		+		43494	11397	21333	21423	50292	50292					0.052195731480424
YPTISLHAL	9	Unmodified	_YPTISLHAL_					0	0	0		ENSG00000074201|ENST00000525428|CLNS1A	ENSG00000074201|ENST00000525428|CLNS1A	ENSG00000074201|ENST00000525428|CLNS1A	MSMS	GG20161007_CRH_Patient100_W632_01	3	507.7839538455009	2	507.784567	1013.55458	NaN	NaN	NaN	NaN	NaN	NaN	NaN	53.747	1	55.147	54.647	55.647	1.4005								0	0	0	0.026118	1	22497	22497		77.984	43.882	1				43495	911	21334	21424	50293	50293					0.04834644448601466
YPTLHTGPF	9	Unmodified	_YPTLHTGPF_					0	0	0			REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7612792849541	2	516.761092	1031.50763	1.8218	0.00094142	-3.7068	-0.0019155	-1.8851	-0.00097413	516.7591734282257	70.38	0.44775	70.38	70.149	70.596	0					30	14	3	0	0	0	0.20838	1	29301	29301		32.117	3.6301	1	1779400	+		43496	8698	21335	21425	50294	50294					-0.006862151025416097
YPTLHTGPF	9	Unmodified	_YPTLHTGPF_					0	0	0			REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	516.761092	1031.50763	1.8218	0.00094142	-3.7068	-0.0019155	-1.8851	-0.00097413	516.7591734282257	70.38	0.44775	70.38	70.149	70.596	0	0.1022	-0.0022844	NaN	32.117	30	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1779400	+		43497	8698	21335	21425							-0.006862151025416097
YPTLHTGPF	9	Unmodified	_YPTLHTGPF_					0	0	0			REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	REV__ENST00000535493.5_1_2:240016681-240219867:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	516.761092	1031.50763	1.4541	0.00075141	-0.45115	-0.00023314	1.0029	0.00051827	516.760962193493	69.854	0.28402	70.176	69.972	70.256	0.32224	-0.1022	0.0010804	NaN	32.117	11	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	467160	+		43498	8698	21335	21425							-0.006862151025416097
YPTNLKTPV	9	Unmodified	_YPTNLKTPV_					0	0	0		ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	ENSG00000114999|ENST00000233336|TTL	MSMS	GG20161007_CRH_Patient100_A02_01	1	516.7911865115166	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	65.986	1	65.986	65.486	66.486	0								0	0	0	0.29162	1	27494	27494		19.439	2.4967	1				43499	1894	21336	21426	50295	50295					0.05062627103052364
YPTQQAEQA	9	Unmodified	_YPTQQAEQA_					0	0	0		nc|ENSG00000125386|P78312-3|FAM193A;FAM193A|p.T577Cfs*75|1|0.32|ENSG00000125386|chr4:2690768-2690769|-/TGTGCAGGCTGTTGCACTGCGCC|frameshift_variant;nc|ENSG00000125386|P78312-4|FAM193A;nc|ENSG00000125386|P78312-6|FAM193A;nc|ENSG00000125386|P78312-2|FAM193A;nc|ENSG00000125386|P78312-5|FAM193A;nc|ENSG00000125386|P78312|FAM193A;ADD1-FAM193A|4|fusion;ADD1-FAM193A|3|fusion;ADD1-FAM193A|1|fusion;ADD1-FAM193A|2|fusion;ENSG00000125386|ENST00000637812|FAM193A	nc|ENSG00000125386|P78312-3|FAM193A	nc|ENSG00000125386|P78312-3|FAM193A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.2426025271416	2	518.240721	1034.46689	2.746	0.0014231	-2.1367	-0.0011073	0.60927	0.00031575	518.2399481475172	75.496	2.7275	76.802	76.247	78.975	1.3063					291	87	8	0	0	0	0.70108	1	32091	32091		7.2892	0.56607	1	7453600			43500	23	21337	21427	50296	50296					-0.04896601212817586
YPTRLDLR	8	Unmodified	_YPTRLDLR_					0	0	0			REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	517.2928954958916	2	517.293091	1032.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	46.765	1	46.765	46.265	47.265	0								0	0	0	1.0178	1	19547	19547		5.7604	0	1		+		43501	8355	21338	21428	50297	50297					0.05664565054416926
YPTRLDLR	8	Unmodified	_YPTRLDLR_					0	0	0			REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2935668826103	2	517.293091	1032.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.448	1	46.408	45.908	46.908	1.9596								0	0	0	1.0178	1	18631	18631		10.183	0	1		+		43502	8355	21338	21428	50298	50298					0.05664565054416926
YPTRLDLR	8	Unmodified	_YPTRLDLR_					0	0	0			REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	REV__CHST2|p.L223Afs*76|1|0.04|ENSG00000175040|chr3:143121479-143121488|CGCTCTTTAC/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	517.2945434451103	2	517.293091	1032.57163	NaN	NaN	NaN	NaN	NaN	NaN	NaN	113.08	1	113.23	112.73	113.73	0.14912								0	0	0	1.0178	1	48966	48966		10.183	0	1		+		43503	8355	21338	21428	50299	50299					0.05664565054416926
YPTRNWSE	8	Unmodified	_YPTRNWSE_					0	0	0			REV__tr|A0A553SJ68|A0A553SJ68_NIACISucrose-6-phosphatehydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16210PE=3SV=1	REV__tr|A0A553SJ68|A0A553SJ68_NIACISucrose-6-phosphatehydrolaseOS=NialliacirculansOX=1397GN=CEQ21_16210PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	526.6243163943291	2	526.743431	1051.47231	1.7155	0.00090365	0.43637	0.00022985	2.1519	0.0011335	526.7441774235072	43.211	0.29766	44.564	44.408	44.705	1.3536					14	9	2	0	0	0	2.3239	1	18145	18145		10.183	0	1	885140	+		43504	14886	21339	21429	50300	50300					-0.05136877630343406
YPTVPCPLH	9	Unmodified	_YPTVPCPLH_					0	0	0		nc|ENSG00000154359|Q17RB8-2|LONRF1;ENSG00000154359|ENST00000398246|LONRF1;ENST00000472173.5_1_X:118112321-118146861:+|nuORF;nc|ENSG00000175556|Q496Y0-3|LONRF3;nc|ENSG00000175556|Q496Y0-2|LONRF3;ENSG00000175556|ENST00000371628|LONRF3	nc|ENSG00000154359|Q17RB8-2|LONRF1	nc|ENSG00000154359|Q17RB8-2|LONRF1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	513.6221191287041	2	513.757495	1025.50044	2.5897	0.0013305	-3.2728	-0.0016814	-0.68315	-0.00035097	514.257370073449	41.23	0.25249	42.555	42.462	42.715	1.3254					12	7	2	0	0	0	0.097511	1	17346	17346		23.148	14.555	1	439460			43505	3386	21340	21430	50301	50301					-0.011292709746157925
YPVEIHEYL	9	Unmodified	_YPVEIHEYL_					0	0	0		ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.7936889529228	2	581.792589	1161.57063	1.2354	0.00071877	0.26719	0.00015545	1.5026	0.00087422	581.7926407795155	48.706	0.64959	50.094	49.864	50.513	1.388					63	20	5	0	0	0	2.1581E-05	4	20379	20330;20379;20429;20471		171.47	91.92	1	23579000			43506	4989	21341	21431	50302;50303;50304;50305	50303					-0.003696941051430258
YPVEIHEYL	9	Unmodified	_YPVEIHEYL_					0	0	0		ENSG00000197223|ENST00000410067|C1D;ENST00000485709.1_1_2:68273401-68290109:-|nuORF	ENSG00000197223|ENST00000410067|C1D	ENSG00000197223|ENST00000410067|C1D	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	581.7934448122978	2	581.792589	1161.57063	2.1328	0.0012409	-0.76855	-0.00044714	1.3643	0.00079372	581.7919908564048	48.243	0.58456	50.22	49.929	50.514	1.9772					64	18	5	0	0	0	4.1345E-05	5	20209	20128;20170;20209;20248;20292		156.16	91.92	1	25526000			43507	4989	21341	21431	50306;50307;50308;50309;50310	50308					-0.003696941051430258
YPVPYGLLI	9	Unmodified	_YPVPYGLLI_					0	0	0			REV__ENSG00000162757|ENST00000294811|C1orf74	REV__ENSG00000162757|ENST00000294811|C1orf74	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	517.8007079958916	2	517.799686	1033.58482	2.8955	0.0014993	-1.0278	-0.00053219	1.8677	0.0009671	517.7992651160139	97.745	0.19082	97.836	97.715	97.906	0.090881					16	6	3	0	0	0	0.39097	1	40922	40922		20.871	2.7362	1	14182000	+		43508	10662	21342	21432	50311	50311					0.06937003113807805
YPVRWKQRLLY	11	Unmodified	_YPVRWKQRLLY_					0	0	0			REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	REV__ENST00000412716.7_1_12:51636901-51636967:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	508.7297546267509	3	507.961144	1520.8616	1.6418	0.000834	0.48878	0.00024828	2.1306	0.0010823	508.29513536973997	33.205	0.42954	33.205	33.147	33.577	0					22	13	2	0	0	0	0.14606	1	14028	14028		0.094841	0.094841	1	924350	+		43509	12925	21343	21433	50312	50312					0.12200669330627534
YPVSLNINL	9	Unmodified	_YPVSLNINL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7941772341728	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.877	1	73.218	72.718	73.718	1.3415								0	0	0	0.0056841	1	30166	30166		97.075	15.462	1				43510	1733	21344	21434	50313	50313					0.050626271030296266
YPVSLNINL	9	Unmodified	_YPVSLNINL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7923461794853	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	71.994	1	73.336	72.836	73.836	1.3415								0	0	0	0.025818	1	30215	30215		85.357	23.999	1				43511	1733	21344	21434	50314	50314					0.050626271030296266
YPVSLNINL	9	Unmodified	_YPVSLNINL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7923461794853	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.121	1	73.458	72.958	73.958	1.3371								0	0	0	0.026112	1	30268	30268		78.149	25.881	1				43512	1733	21344	21434	50315	50315					0.050626271030296266
YPVSLNINL	9	Unmodified	_YPVSLNINL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MSMS	GG20161007_CRH_Patient100_W632_01	3	516.7911865115166	2	516.78985	1031.56515	NaN	NaN	NaN	NaN	NaN	NaN	NaN	72.259	1	73.588	73.088	74.088	1.3297								0	0	0	0.21022	1	30325	30325		25.399	4.9457	1				43513	1733	21344	21434	50316	50316					0.050626271030296266
YPVSLNINL	9	Unmodified	_YPVSLNINL_					0	0	0		nc|ENSG00000111319|P37088-4|SCNN1A;ENSG00000111319|ENST00000228916|SCNN1A;nc|ENSG00000111319|P37088-5|SCNN1A;nc|ENSG00000111319|P37088-6|SCNN1A;nc|ENSG00000111319|P37088-2|SCNN1A;nc|ENSG00000111319|P37088-3|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	nc|ENSG00000111319|P37088-4|SCNN1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	516.7921630740166	2	516.78985	1031.56515	2.1736	0.0011233	2.5351	0.0013101	4.7087	0.0024334	516.7912690173599	71.5	0.86977	73.324	73.065	73.935	1.8239					63	27	3	0	0	0	0.0075027	3	30005	29959;30005;30085		112.59	41.46	1	4802300			43514	1733	21344	21434	50317;50318;50319	50318					0.050626271030296266
YQCAEVLESF	10	Unmodified	_YQCAEVLESF_					0	0	0		nc|ENSG00000171634|Q12830-4|BPTF;ENSG00000171634|ENST00000306378|BPTF;nc|ENSG00000171634|Q12830|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	nc|ENSG00000171634|Q12830-4|BPTF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.7681762576103	2	594.765714	1187.51688	2.6335	0.0015663	1.7086	0.0010162	4.3421	0.0025825	594.766750407811	76.77	0.40579	78.064	77.825	78.23	1.2938					49	12	6	0	0	0	0.79268	1	32247	32247		13.042	0.86772	1	4774600			43515	4202	21345	21435	50320	50320					-0.06938234599192583
YQFTGIKKY	9	Unmodified	_YQFTGIKKY_					0	0	0		ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.3118163943291	2	574.310949	1146.60735	1.3132	0.00075419	-0.030633	-1.7593E-05	1.2826	0.0007366	574.3109617980921	23.981	0.46383	25.222	25.021	25.485	1.241					45	14	4	0	0	0	0.0051116	3	10043	9995;10043;10087		121.53	90.898	1	11841000			43516	4308	21346	21436	50321;50322;50323	50322					0.03990602511430552
YQFTGIKKY	9	Unmodified	_YQFTGIKKY_					0	0	0		ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2101928591728	3	383.209725	1146.60735	0.61344	0.00023508	0.40126	0.00015377	1.0147	0.00038884	383.2100237518304	24.012	0.52639	25.253	24.989	25.516	1.241					59	16	5	0	0	0	0.031145	2	10018	10018;10068		78.06	57.48	1	47001000			43517	4308	21346	21436	50324;50325	50324					0.03990602511430552
YQFTGIKKY	9	Unmodified	_YQFTGIKKY_					0	0	0		ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3113891482353	2	574.310949	1146.60735	0.58614	0.00033662	0.38473	0.00022095	0.97086	0.00055758	574.3110779384112	23.602	0.54327	25.253	24.96	25.503	1.6511					50	17	4	0	0	0	0.03071	3	9871	9785;9832;9871		86.332	52.229	1	8709900			43518	4308	21346	21436	50326;50327;50328	50328					0.03990602511430552
YQFTGIKKY	9	Unmodified	_YQFTGIKKY_					0	0	0		ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	ENSG00000173915|ENST00000369815|ATP5MK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	383.2101318240166	3	383.209725	1146.60735	0.31438	0.00012047	0.21537	8.2532E-05	0.52975	0.00020301	383.2099293803708	23.566	0.54403	25.217	24.991	25.535	1.6511					62	17	5	0	0	0	0.044893	3	9845	9808;9845;9881		65.474	49.735	1	37882000			43519	4308	21346	21436	50329;50330;50331	50330					0.03990602511430552
YQFYKYWCRRE	11	Unmodified	_YQFYKYWCRRE_					0	0	0			REV__nc|ENSG00000215296|A8MYB1|TMCO5B	REV__nc|ENSG00000215296|A8MYB1|TMCO5B	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	329.0703307986259	5	329.15844	1640.75582	1.6338	0.00053778	0.37716	0.00012415	2.011	0.00066193	329.3584258551699	56.763	0.50266	57.084	56.758	57.261	0.32103					25	16	2	0	0	0	0.14606	1	23677	23677		0	0	1	910040	+		43520	14538	21347	21437	50332	50332					-0.03893034577185972
YQGSSSTCIL	10	Unmodified	_YQGSSSTCIL_					0	0	0		ENSG00000138074|ENST00000310574|SLC5A6;ENST00000461757.1_1_2:27423306-27424138:-|nuORF	ENSG00000138074|ENST00000310574|SLC5A6	ENSG00000138074|ENST00000310574|SLC5A6	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	529.7434570193291	2	529.744782	1057.47501	3.3375	0.001768	-2.6019	-0.0013783	0.73561	0.00038968	529.7440137841169	72.754	0.61885	74.084	73.762	74.381	1.3297					42	19	4	0	0	0	0.81324	1	30531	30531		10.824	0	1	3253800			43521	2810	21348	21438	50333	50333					-0.05142790287709431
YQGSWTTAS	9	Unmodified	_YQGSWTTAS_					0	0	0			REV__CON__Streptavidin	REV__CON__Streptavidin	MSMS	GG20161007_CRH_Patient100_A02_02	2	334.1504394412041	3	334.150535	999.429775	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.8	1	110.84	110.34	111.34	0.047043								0	0	0	0.42693	1	47788	47788		0	0	1		+	+	43522	8402	21349	21439	50334	50334					-0.06996272758590294
YQIKKTKLDR	10	Unmodified	_YQIKKTKLDR_					0	0	0		ENSG00000139722|ENST00000267202|VPS37B	ENSG00000139722|ENST00000267202|VPS37B	ENSG00000139722|ENST00000267202|VPS37B	MSMS	GG20161007_CRH_Patient100_A02_01	1	646.8884765505791	2	646.887887	1291.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	14.759	1	14.759	14.259	15.259	0								0	0	0	0.66185	1	6125	6125		1.3295	0	1				43523	2891	21350	21440	50335	50335					0.12701012276920665
YQIKKTKLDR	10	Unmodified	_YQIKKTKLDR_					0	0	0		ENSG00000139722|ENST00000267202|VPS37B	ENSG00000139722|ENST00000267202|VPS37B	ENSG00000139722|ENST00000267202|VPS37B	MSMS	GG20161007_CRH_Patient100_W632_02	4	646.8864013552666	2	646.887887	1291.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	13.497	1	14.325	13.825	14.825	0.82789								0	0	0	0.66185	1	5597	5597		1.3295	0	1				43524	2891	21350	21440	50336	50336					0.12701012276920665
YQKNYLIF	8	Unmodified	_YQKNYLIF_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|14|1|sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|14|1|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	544.7940551638603	2	544.792392	1087.57023	2.2729	0.0012383	1.0809	0.00058888	3.3538	0.0018271	544.7925886639472	47.439	0.5133	48.822	48.504	49.017	1.3825					52	15	4	0	0	0	0.59872	1	19825	19825		40.449	4.4044	1	6741200	+		43525	14209	21351	21441	50337	50337					0.029949309656331025
YQNQTDNSV	9	Unmodified	_YQNQTDNSV_					0	0	0		DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	534.7335082888603	2	534.73326	1067.45197	1.7104	0.0009146	-1.4592	-0.00078027	0.2512	0.00013433	534.7326999056066	65.909	0.51151	65.909	65.612	66.123	0					64	15	6	0	0	0	0.6486	1	27457	27457		9.3831	1.2276	1	9027600			43526	394	21352	21442	50338	50338					-0.07906093080805476
YQNQTDNSV	9	Unmodified	_YQNQTDNSV_					0	0	0		DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	534.7335693240166	2	534.73326	1067.45197	3.0212	0.0016156	-2.6393	-0.0014113	0.38198	0.00020426	534.732130885068	64.259	0.46035	65.666	65.433	65.894	1.4071					75	14	7	0	0	0	0.6486	1	26942	26942		9.3831	3.6513	1	13136000			43527	394	21352	21442	50339	50339					-0.07906093080805476
YQNQTDNSV	9	Unmodified	_YQNQTDNSV_					0	0	0		DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	534.7336303591728	2	534.73326	1067.45197	3.1097	0.0016628	-2.6087	-0.0013949	0.50103	0.00026792	534.7320395647338	63.803	0.49529	65.731	65.393	65.888	1.928					78	15	7	0	0	0	0.53525	1	26755	26755		13.906	5.7505	1	9871900			43528	394	21352	21442	50340	50340					-0.07906093080805476
YQNQTDNSV	9	Unmodified	_YQNQTDNSV_					0	0	0		DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	534.73326	1067.45197	2.0056	0.0010725	-0.91588	-0.00048975	1.0898	0.00058273	534.7326085660205	65.398	0.50584	65.724	65.485	65.991	0.32689	-0.0333	0.00095745	NaN	13.906	40	15	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6043300			43529	394	21352	21442							-0.07906093080805476
YQNQTDNSV	9	Unmodified	_YQNQTDNSV_					0	0	0		DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant;ENSG00000198924|ENST00000361384|DCLRE1A	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	DCLRE1A|p.H251Pfs*16|1|0.25|ENSG00000198924|chr10:113850341-113850353|GATGTTTGGATAT/-|frameshift_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	534.73326	1067.45197	3.0212	0.0016156	-2.6393	-0.0014113	0.38198	0.00020426	534.732130885068	64.259	0.46035	65.666	65.433	65.894	1.4071	-0.091349	-0.00088565	NaN	13.906	75	14	7	NaN	NaN	NaN	NaN	0				NaN	NaN	0	13136000			43530	394	21352	21442							-0.07906093080805476
YQREYECPDFP	11	Unmodified	_YQREYECPDFP_					0	0	0		ENST00000553891.5_1_14:73491136-73491307:-|nuORF	ENST00000553891.5_1_14:73491136-73491307:-|nuORF	ENST00000553891.5_1_14:73491136-73491307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	723.8049804568291	2	723.803359	1445.59217	1.206	0.00087292	2.9454	0.0021319	4.1514	0.0030048	723.8052214517792	24.719	0.36788	24.719	24.552	24.92	0					26	11	3	0	0	0	0.97491	1	10374	10374		5.2969	0.39987	1	2360800			43531	7283	21353	21443	50341	50341					-0.112806771387568
YQREYECPDFP	11	Unmodified	_YQREYECPDFP_					0	0	0		ENST00000553891.5_1_14:73491136-73491307:-|nuORF	ENST00000553891.5_1_14:73491136-73491307:-|nuORF	ENST00000553891.5_1_14:73491136-73491307:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	723.8066284060478	2	723.803359	1445.59217	0.79096	0.0005725	3.5441	0.0025653	4.3351	0.0031378	723.8061393315952	24.592	0.30204	24.834	24.654	24.956	0.24251					15	9	2	0	0	0	0.97491	1	10293	10293		5.2969	0	1	762800			43532	7283	21353	21443	50342	50342					-0.112806771387568
YQRIKRRT	8	Unmodified	_YQRIKRRT_					0	0	0			REV__ENST00000419554.6_1_2:38523614-38525308:-|nuORF	REV__ENST00000419554.6_1_2:38523614-38525308:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	560.8390380740166	2	560.838531	1119.66251	1.1511	0.00064559	-0.95381	-0.00053493	0.1973	0.00011066	560.837808701699	96.023	0.25909	96.023	95.891	96.15	0					18	8	3	0	0	0	0.89178	1	40141	40141		0.69038	0.088878	1	3168000	+		43533	12899	21354	21444	50343	50343					0.10746453822548574
YQSELELRV	9	Unmodified	_YQSELELRV_					0	0	0		VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant;nc|ENSG00000048707|Q5THJ4-2|VPS13D;ENSG00000048707|ENST00000620676|VPS13D;VPS13D|p.G1592Yfs*19|1|0.06|ENSG00000048707|chr1:12282875-12282876|-/TACAAGTGTGACCAGCCGCGCCCAGGCA|frameshift_variant	VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant	VPS13D|p.M3578Ifs*3|1|0.03|ENSG00000048707|chr1:12369624-12369625|-/TATAT|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	568.7999755740166	2	568.800946	1135.58734	2.3836	0.0013558	-3.5422	-0.0020148	-1.1586	-0.00065902	568.7993173722894	40.837	0.25063	42.163	41.991	42.241	1.3254					10	7	2	0	0	0	0.1165	1	17138	17138		9.3831	5.4387	1	548110			43534	686	21355	21445	50344	50344					0.024968067807776606
YQTPRLWLF	9	Unmodified	_YQTPRLWLF_					0	0	0		ENST00000467275.1_1_3:112256557-112257010:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3;ENSG00000144848|ENST00000283290|ATG3;ENST00000495756.5_1_3:112255248-112280627:-|nuORF	ENST00000467275.1_1_3:112256557-112257010:-|nuORF	ENST00000467275.1_1_3:112256557-112257010:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.3326904177666	2	612.332216	1222.64988	2.3737	0.0014535	-2.8215	-0.0017277	-0.4478	-0.0002742	612.3302043045518	76.155	0.94759	77.448	77.097	78.045	1.2938					85	30	4	0	0	0	0.02878	5	31994	31895;31942;31994;32052;32101		89.401	60.319	1	15243000			43535	3096	21356	21446	50345;50346;50347;50348;50349	50347					0.0474599763963397
YQTPRLWLF	9	Unmodified	_YQTPRLWLF_					0	0	0		ENST00000467275.1_1_3:112256557-112257010:-|nuORF;nc|ENSG00000144848|Q9NT62-2|ATG3;ENSG00000144848|ENST00000283290|ATG3;ENST00000495756.5_1_3:112255248-112280627:-|nuORF	ENST00000467275.1_1_3:112256557-112257010:-|nuORF	ENST00000467275.1_1_3:112256557-112257010:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.3326904177666	2	612.332216	1222.64988	2.6737	0.0016372	-1.7652	-0.0010809	0.9085	0.00055631	612.3308775004019	75.564	0.51226	77.346	77.04	77.552	1.7817					53	16	4	0	0	0	0.0049178	3	31681	31636;31681;31731		122.18	89.874	1	19306000			43536	3096	21356	21446	50350;50351;50352	50351					0.0474599763963397
YQTYLHLPI	9	Unmodified	_YQTYLHLPI_					0	0	0			REV__ENST00000470175.1_1_1:35859216-35862664:+|nuORF	REV__ENST00000470175.1_1_1:35859216-35862664:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.3115722537041	2	574.310949	1146.60735	0.58614	0.00033662	0.38473	0.00022095	0.97086	0.00055758	574.3110779384112	23.602	0.54327	25.253	24.96	25.503	1.6511					50	17	4	0	0	0	0.77526	1	9926	9926		4.3292	0	1	8709900	+		43537	10305	21357	21447	50353	50353					0.03990602511430552
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8824951052666	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.286	1	3.286	2.786	3.786	0								0	0	0	0.66264	1	1348	1348		0	0	1				43538	5010	21358	21448	50354	50354					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8821594119072	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6968	1	3.6968	3.1968	4.1968	0								0	0	0	0.66264	1	1518	1518		0	0	1				43539	5010	21358	21448	50355	50355					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_A02_01	1	434.8828002810478	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5237	1	5.5237	5.0237	6.0237	0								0	0	0	0.66264	1	2268	2268		0	0	1				43540	5010	21358	21448	50356	50356					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8827087283134	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.068	1	2.7022	2.2022	3.2022	0.63417								0	0	0	0.66264	1	848	848		0	0	1				43541	5010	21358	21448	50357	50357					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_W632_01	3	434.8823425173759	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1778	1	2.812	2.312	3.312	0.63417								0	0	0	0.66264	1	894	894		0	0	1				43542	5010	21358	21448	50358	50358					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8827697634697	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.027698	1	0.76348	0.26348	1.2635	0.73579								0	0	0	0.66264	1	11	11		0	0	1				43543	5010	21358	21448	50359	50359					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8828613162041	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.23742	1	0.97321	0.47321	1.4732	0.73579								0	0	0	0.66264	1	97	97		0	0	1				43544	5010	21358	21448	50360	50360					-0.012230481449932995
YQYHLRQHTG	10	Unmodified	_YQYHLRQHTG_					0	0	0		ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	ENSG00000197483|ENST00000598519|ZNF628	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8823119997978	3	434.882782	1301.62652	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.33568	1	1.0715	0.57147	1.5715	0.73579								0	0	0	0.66264	1	138	138		0	0	1				43545	5010	21358	21448	50361	50361					-0.012230481449932995
YQYPVIIHL	9	Unmodified	_YQYPVIIHL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	573.3223754763603	2	573.321317	1144.62808	1.5669	0.00089836	0.68867	0.00039483	2.2556	0.0012932	573.3216995458802	65.992	0.4478	65.992	65.741	66.189	0					35	13	3	0	0	0	0.098957	3	27449	27449;27495;27533		49.669	31.534	1	1777800			43546	804	21359	21449	50362;50363;50364	50362					0.061551928911057985
YQYPVIIHL	9	Unmodified	_YQYPVIIHL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	573.3228637576103	2	573.321317	1144.62808	1.8102	0.0010378	0.6701	0.00038418	2.4803	0.001422	573.321901759209	65.42	0.50787	65.746	65.452	65.96	0.32688					37	15	3	0	0	0	0.098957	3	27381	27326;27381;27429		49.669	31.534	1	1689200			43547	804	21359	21449	50365;50366;50367	50366					0.061551928911057985
YQYPVIIHL	9	Unmodified	_YQYPVIIHL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	573.3265869021416	2	573.321317	1144.62808	2.7581	0.0015813	1.2813	0.00073462	4.0395	0.0023159	573.3221024415474	64.2	0.59251	65.607	65.272	65.865	1.4071					44	18	3	0	0	0	0.070759	3	26843	26843;26890;26945		59.795	45.214	1	4814100			43548	804	21359	21449	50368;50369;50370	50368					0.061551928911057985
YQYPVIIHL	9	Unmodified	_YQYPVIIHL_					0	0	0		ENST00000470968.6_1_1:43829589-43833598:-|nuORF;nc|ENSG00000066322|Q9BW60-2|ELOVL1;ENSG00000066322|ENST00000372458|ELOVL1	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	ENST00000470968.6_1_1:43829589-43833598:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	573.3237792849541	2	573.321317	1144.62808	2.7911	0.0016002	1.5343	0.00087966	4.3254	0.0024798	573.322065472629	63.608	0.7525	65.552	65.091	65.843	1.9444					50	23	3	0	0	0	0.070759	3	26642	26642;26689;26735		59.795	35.121	1	5643500			43549	804	21359	21449	50371;50372;50373	50371					0.061551928911057985
YRCTCKKGFKG	11	Unmodified	_YRCTCKKGFKG_					0	0	0		ENSG00000134250|ENST00000256646|NOTCH2;NOTCH2|p.N844Mfs*40|1|0.03|ENSG00000134250|chr1:119949077-119949077|C/-|frameshift_variant	ENSG00000134250|ENST00000256646|NOTCH2	ENSG00000134250|ENST00000256646|NOTCH2	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8877136111259	3	430.88637	1289.63728	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.14	1	111.29	110.79	111.79	0.15038								0	0	0	0.63775	1	48177	48177		0	0	1				43550	2602	21360	21450	50374	50374					0.0040489491343578266
YRDDQFAYF	9	Unmodified	_YRDDQFAYF_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.7723876833916	2	612.769645	1223.52474	1.322	0.00081008	2.3889	0.0014638	3.7109	0.0022739	612.7709262552994	48.46	0.68064	49.848	49.521	50.202	1.388					51	21	3	0	0	0	0.19075	3	20262	20213;20262;20316		34.102	12.356	1	11248000	+		43551	8697	21361	21451	50375;50376;50377	50376					-0.07808339287407762
YRDDQFAYF	9	Unmodified	_YRDDQFAYF_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	612.7718994021416	2	612.769645	1223.52474	2.2507	0.0013792	1.1368	0.00069658	3.3875	0.0020757	612.7703507248732	47.996	0.86329	49.973	49.619	50.483	1.9772					68	27	4	0	0	0	0.27148	4	20119	20068;20119;20160;20229		26.884	10.106	1	11780000	+		43552	8697	21361	21451	50378;50379;50380;50381	50379					-0.07808339287407762
YRDDQFAYF	9	Unmodified	_YRDDQFAYF_					0	0	0			REV__ENSG00000134318|ENST00000315872|ROCK2	REV__ENSG00000134318|ENST00000315872|ROCK2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	612.769645	1223.52474	1.322	0.00081008	2.3889	0.0014638	3.7109	0.0022739	612.7709262552994	48.46	0.68064	49.848	49.521	50.202	1.388	-0.062708	0.00060191	NaN	34.102	51	21	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11248000	+		43553	8697	21361	21451							-0.07808339287407762
YRDTPPHW	8	Unmodified	_YRDTPPHW_					0	0	0		chr18:12714027-12718517|135|13.47|0.38|5.17|+|0|TE_info:AluSz6,AluSz6_dup42130,Alu,SINE,donor,-,12713760,12714027|None,PSMG2|2	chr18:12714027-12718517|135|13.47|0.38|5.17|+|0|TE_info:AluSz6,AluSz6_dup42130,Alu,SINE,donor,-,12713760,12714027|None,PSMG2|2	chr18:12714027-12718517|135|13.47|0.38|5.17|+|0|TE_info:AluSz6,AluSz6_dup42130,Alu,SINE,donor,-,12713760,12714027|None,PSMG2|2	MSMS	GG20161007_CRH_Patient100_A02_01	1	536.2643310427666	2	536.253966	1070.49338	NaN	NaN	NaN	NaN	NaN	NaN	NaN	102.99	1	102.99	102.49	103.49	0								0	0	0	1.0178	1	43178	43178		2.3027	0	1				43554	220	21362	21452	50382	50382					-0.03904867530809497
YRESSEEH	8	Unmodified	_YRESSEEH_					0	0	0		ENST00000458074.1_1_X:150394703-150395165:-|nuORF	ENST00000458074.1_1_X:150394703-150395165:-|nuORF	ENST00000458074.1_1_X:150394703-150395165:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	346.1494933962822	3	346.149194	1035.42575	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.501	1	21.024	20.524	21.524	1.5237								0	0	0	1.0178	1	8103	8103		0.45834	0	1				43555	6654	21363	21453	50383	50383					-0.09054362252277315
YRFFLERKITI	11	Unmodified	_YRFFLERKITI_					0	0	0		tr|A0A553SS39|A0A553SS39_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02205PE=4SV=1	tr|A0A553SS39|A0A553SS39_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02205PE=4SV=1	tr|A0A553SS39|A0A553SS39_NIACIPermeaseIICcomponentOS=NialliacirculansOX=1397GN=CEQ21_02205PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	495.9610168337822	3	495.9574	1484.85037	3.2753	0.0016244	2.2236	0.0011028	5.4989	0.0027272	495.9585910148389	90.552	1.9189	90.761	90.049	91.968	0.20904					125	59	3	0	0	0	1.0395	1	38119	38119		0.08335	0	1	2352600			43556	16592	21364	21454	50384	50384					0.12733847236449947
YRFRPRTLV	9	Unmodified	_YRFRPRTLV_					0	0	0			REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	604.3576537966728	2	604.356557	1206.69856	2.9898	0.0018069	-1.2162	-0.00073502	1.7736	0.0010719	604.3560061354474	87.189	0.82157	87.189	86.612	87.434	0					153	33	5	0	0	0	0.85019	2	36146	36146;36522		0.52476	0	1	97432000	+		43557	10332	21365	21455	50385;50386	50385					0.10347910999394117
YRFRPRTLV	9	Unmodified	_YRFRPRTLV_					0	0	0			REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	604.3577148318291	2	604.356557	1206.69856	2.4803	0.001499	-0.51829	-0.00031323	1.962	0.0011857	604.3564272727872	86.972	0.89062	87.216	86.606	87.496	0.24387					149	35	5	0	0	0	0.85019	3	36177	36177;36231;36455		0.52476	0	1	91881000	+		43558	10332	21365	21455	50387;50388;50389	50387					0.10347910999394117
YRFRPRTLV	9	Unmodified	_YRFRPRTLV_					0	0	0			REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	604.3581420779228	2	604.356557	1206.69856	2.8873	0.001745	-0.20112	-0.00012155	2.6862	0.0016234	604.3565582990873	85.457	1.3118	86.584	86.329	87.641	1.1265					178	53	5	0	0	0	0.85019	5	35843	35843;36079;36140;36192;36258		0.52476	0	1	89814000	+		43559	10332	21365	21455	50390;50391;50392;50393;50394	50390					0.10347910999394117
YRFRPRTLV	9	Unmodified	_YRFRPRTLV_					0	0	0			REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3595458865166	2	604.356557	1206.69856	3.1699	0.0019157	-0.99519	-0.00060145	2.1747	0.0013143	604.3561534507077	85.185	0.9964	86.782	86.401	87.397	1.5962					136	40	5	0	0	0	0.85019	6	35609	35609;35723;35828;35893;36003;36063		0.52476	0	1	92723000	+		43560	10332	21365	21455	50395;50396;50397;50398;50399;50400	50395					0.10347910999394117
YRFRPRTLV	9	Unmodified	_YRFRPRTLV_					0	0	0			REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	REV__nc|ENSG00000147724|Q49AJ0-2|FAM135B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.3579589724541	2	604.356557	1206.69856	3.7787	0.0022837	-1.0534	-0.00063662	2.7253	0.001647	604.3561833788876	86.024	0.48603	87.571	87.203	87.69	1.547					50	19	3	0	0	0	0.85019	1	36191	36191		0.52476	0	1	57504000	+		43561	10332	21365	21455	50401	50401					0.10347910999394117
YRGSDALP	8	Unmodified	_YRGSDALP_					0	0	0		sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	878.4355346560478	1	878.436658	877.429381	1.1687	0.0010266	-1.7608	-0.0015468	-0.5921	-0.00052012	878.4353490448208	104.85	0.11048	104.85	104.81	104.92	0					16	5	5	0	0	0	0.89178	1	44367	44367		0.69038	0	1	177910000			43562	15991	21366	21456	50402	50402					-0.014236476877727
YRGSDALP	8	Unmodified	_YRGSDALP_					0	0	0		sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	sp|P09709|US34_HCMVAProteinUS34OS=Humancytomegalovirus(strainAD169)OX=10360GN=US34PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	878.4361450076103	1	878.436658	877.429381	3.0778	0.0027036	-2.964	-0.0026037	0.11377	9.9942E-05	878.4343170270628	104.78	0.10991	104.94	104.9	105.01	0.16055					15	5	4	0	0	0	0.89178	1	44486	44486		0.69038	0	1	219820000			43563	15991	21366	21456	50403	50403					-0.014236476877727
YRHGLPLV	8	Unmodified	_YRHGLPLV_					0	0	0		ENST00000472310.5_1_4:110481463-110603916:+|nuORF;ENSG00000005059|ENST00000394650|MCUB	ENST00000472310.5_1_4:110481463-110603916:+|nuORF	ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1551086306572	3	318.855505	953.544686	0.22349	7.1261E-05	3.1291	0.00099773	3.3526	0.001069	318.85675407127974	25.92	0.14988	26.172	26.073	26.223	0.25197					6	4	2	0	0	0	2.3239	1	10805	10805		0.45834	0	1	195280			43564	479	21367	21457	50404	50404					0.06605501233912037
YRHGLPLV	8	Unmodified	_YRHGLPLV_					0	0	0		ENST00000472310.5_1_4:110481463-110603916:+|nuORF;ENSG00000005059|ENST00000394650|MCUB	ENST00000472310.5_1_4:110481463-110603916:+|nuORF	ENST00000472310.5_1_4:110481463-110603916:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	318.1550475955009	3	318.855505	953.544686	0.14833	4.7295E-05	1.7122	0.00054595	1.8606	0.00059325	318.8558752222233	24.522	0.24114	24.765	24.654	24.895	0.24251					11	7	2	0	0	0	2.3239	1	10263	10263		0.45834	0	1	200870			43565	479	21367	21457	50405	50405					0.06605501233912037
YRHRMWVKYKR	11	Unmodified	_YRHRMWVKYKR_					0	0	0			REV__NOC4L-ASPSCR1|1|fusion	REV__NOC4L-ASPSCR1|1|fusion	MSMS	GG20161007_CRH_Patient100_A02_02	2	541.6341430544853	3	541.633145	1621.8776	NaN	NaN	NaN	NaN	NaN	NaN	NaN	51.802	1	52.128	51.628	52.628	0.32553								0	0	0	0.63775	1	21701	21701		0.08335	0	1		+		43566	11437	21368	21458	50406	50406					0.09154052295821202
YRIIFRTRELI	11	Unmodified	_YRIIFRTRELI_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9655334353447	3	493.964666	1478.87217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7464	1	4.7464	4.2464	5.2464	0								0	0	0	0.63775	1	1950	1950		0.094841	0	1				43567	1540	21369	21459	50407	50407					0.1518865198502226
YRIIFRTRELI	11	Unmodified	_YRIIFRTRELI_					0	0	0		ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	ENSG00000105738|ENST00000222345|SIPA1L3	MSMS	GG20161007_CRH_Patient100_A02_01	1	493.9654724001884	3	493.964666	1478.87217	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.7416	1	7.7416	7.2416	8.2416	0								0	0	0	0.63775	1	3183	3183		0.094841	0	1				43568	1540	21369	21459	50408	50408					0.1518865198502226
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1074.713916003704	1	1074.71461	1073.70733	1.2746	0.0013698	0.044965	4.8324E-05	1.3195	0.0014181	1074.7151939229025	28.214	0.40438	28.214	28.1	28.504	0					20	12	2	0	0	0	0.88587	1	11879	11879		5.2307	0	1	951590	+		43569	11598	21370	21460	50409	50409					0.17342884635877454
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1074.719653308392	1	1074.71461	1073.70733	1.305	0.0014025	2.7195	0.0029227	4.0245	0.0043252	1074.7178738476177	28.972	1.1665	28.972	28.473	29.64	0					62	37	2	0	0	0	0.88587	1	12154	12154		5.2307	0	1	831430	+		43570	11598	21370	21460	50410	50410					0.17342884635877454
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1075.719409167767	1	1074.71461	1073.70733	1.9589	0.0021052	-2.4669	-0.0026513	-0.50808	-0.00054604	1075.7157180702645	45.122	0.095703	45.122	45.059	45.155	0					4	2	2	0	0	0	0.89178	1	18888	18888		0.69038	0	1	214570	+		43571	11598	21370	21460	50411	50411					0.17342884635877454
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	1075.220996081829	1	1074.71461	1073.70733	1.305	0.0014025	2.7195	0.0029227	4.0245	0.0043252	1074.7178738476177	28.972	1.1665	28.972	28.473	29.64	0					62	37	2	0	0	0	2.3239	1	12011	12011		5.2307	0	1	831430	+		43572	11598	21370	21460	50412	50412					0.17342884635877454
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	1075.219409167767	1	1074.71461	1073.70733	1.7923	0.0019262	2.0477	0.0022007	3.84	0.0041269	1074.7156907069223	29.135	0.97373	29.415	28.769	29.743	0.27929					43	31	2	0	0	0	2.3239	1	12299	12299		5.2307	0	1	1133200	+		43573	11598	21370	21460	50413	50413					0.17342884635877454
YRILRIIK	8	Unmodified	_YRILRIIK_					0	0	0			REV__ENSG00000188997|ENST00000340067|KCTD21	REV__ENSG00000188997|ENST00000340067|KCTD21	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		1	1074.71461	1073.70733	1.9589	0.0021052	-2.4669	-0.0026513	-0.50808	-0.00054604	1075.7157180702645	45.122	0.095703	45.122	45.059	45.155	0	0	0	NaN	0.69038	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	214570	+		43574	11598	21370	21460							0.17342884635877454
YRKEIKPP	8	Unmodified	_YRKEIKPP_					0	0	0		ENST00000491836.2_1_6:166853785-166873036:-|nuORF;ENSG00000071242|ENST00000265678|RPS6KA2;nc|ENSG00000071242|Q15349-3|RPS6KA2;nc|ENSG00000071242|Q15349-2|RPS6KA2	ENST00000491836.2_1_6:166853785-166873036:-|nuORF	ENST00000491836.2_1_6:166853785-166873036:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2086364626884	3	344.206315	1029.59712	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.905	1	97.01	96.51	97.51	0.105								0	0	0	1.0178	1	40550	40550		0.45834	0	1				43575	867	21371	21461	50414	50414					0.08350039576839663
YRKINKNNK	9	Unmodified	_YRKINKNNK_					0	0	0			REV__tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	REV__tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	589.3441039919853	2	589.343646	1176.67274	1.9837	0.0011691	-0.76138	-0.00044871	1.2223	0.00072035	589.3430451500185	77.28	3.107	77.28	76.284	79.391	0					234	99	5	0	0	0	0.85019	2	32550	32550;32652		0.52476	0	1	9065200	+		43576	15420	21372	21462	50415;50416	50415					0.09147016757128767
YRKINKNNK	9	Unmodified	_YRKINKNNK_					0	0	0			REV__tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	REV__tr|A0A7D6VRQ5|A0A7D6VRQ5_9CLOTTypeVIIsecretionproteinEssCOS=ClostridiumintestinaleOX=36845GN=essCPE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	589.3446533083916	2	589.343646	1176.67274	1.9498	0.0011491	-0.65915	-0.00038846	1.2907	0.00076065	589.3430769859183	77.076	2.0116	77.392	76.448	78.46	0.31653					212	63	5	0	0	0	0.85019	1	32555	32555		0.52476	0	1	8239500	+		43577	15420	21372	21462	50417	50417					0.09147016757128767
YRKKKLLL	8	Unmodified	_YRKKKLLL_					0	0	0			REV__ENSG00000176108|ENST00000325167|CHMP6	REV__ENSG00000176108|ENST00000325167|CHMP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3687621951103	2	531.363319	1060.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.51	1	106.66	106.16	107.16	0.15781								0	0	0	1.0178	1	45624	45624		0	0	1		+		43578	11171	21373	21463	50418	50418					0.18415768778663733
YRKKKLLL	8	Unmodified	_YRKKKLLL_					0	0	0			REV__ENSG00000176108|ENST00000325167|CHMP6	REV__ENSG00000176108|ENST00000325167|CHMP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3671142458916	2	531.363319	1060.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.69	1	106.84	106.34	107.34	0.15781								0	0	0	1.0178	1	45741	45741		0	0	1		+		43579	11171	21373	21463	50419	50419					0.18415768778663733
YRKKKLLL	8	Unmodified	_YRKKKLLL_					0	0	0			REV__ENSG00000176108|ENST00000325167|CHMP6	REV__ENSG00000176108|ENST00000325167|CHMP6	MSMS	GG20161007_CRH_Patient100_W632_01	3	531.3668701052666	2	531.363319	1060.71209	NaN	NaN	NaN	NaN	NaN	NaN	NaN	106.79	1	106.94	106.44	107.44	0.15781								0	0	0	1.0178	1	45803	45803		0	0	1		+		43580	11171	21373	21463	50420	50420					0.18415768778663733
YRLAASAL	8	Unmodified	_YRLAASAL_					0	0	0		ENST00000527401.5_1_11:45953676-45953745:-|nuORF	ENST00000527401.5_1_11:45953676-45953745:-|nuORF	ENST00000527401.5_1_11:45953676-45953745:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	432.2960082888603	2	432.750527	863.486502	3.1374	0.0013577	-1.6998	-0.00073559	1.4376	0.00062212	432.7487008121143	104.48	0.053795	104.54	104.51	104.57	0.056801					4	2	2	0	0	0	2.3239	1	44055	44055		5.2307	0	1	2121500			43581	7137	21374	21464	50421	50421					0.049298195886080975
YRLTRLTI	8	Unmodified	_YRLTRLTI_					0	0	0			REV__tr|A0A7D6ZFB3|A0A7D6ZFB3_9CLOTAnthranilatesynthasecomponentIOS=ClostridiumintestinaleOX=36845GN=HZF06_17170PE=4SV=1	REV__tr|A0A7D6ZFB3|A0A7D6ZFB3_9CLOTAnthranilatesynthasecomponentIOS=ClostridiumintestinaleOX=36845GN=HZF06_17170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	518.3186523318291	2	518.319109	1034.62366	2.6638	0.0013807	-3.0493	-0.0015805	-0.38558	-0.00019985	518.3176131956362	77.749	1.5071	79.03	78.791	80.299	1.2809					89	48	2	0	0	0	0.52405	1	32695	32695		46.021	3.9264	1	56267000	+		43582	15630	21375	21465	50422	50422					0.10773728468188892
YRLTRLTI	8	Unmodified	_YRLTRLTI_					0	0	0			REV__tr|A0A7D6ZFB3|A0A7D6ZFB3_9CLOTAnthranilatesynthasecomponentIOS=ClostridiumintestinaleOX=36845GN=HZF06_17170PE=4SV=1	REV__tr|A0A7D6ZFB3|A0A7D6ZFB3_9CLOTAnthranilatesynthasecomponentIOS=ClostridiumintestinaleOX=36845GN=HZF06_17170PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.3185912966728	2	518.319109	1034.62366	1.4452	0.00074905	-2.8505	-0.0014774	-1.4053	-0.00072839	518.3177772481836	77.211	1.1241	78.962	78.592	79.716	1.7514					111	35	5	0	0	0	0.12697	1	32446	32446		88.954	3.6818	1	46860000	+		43583	15630	21375	21465	50423	50423					0.10773728468188892
YRLVAELPKRV	11	Unmodified	_YRLVAELPKRV_					0	0	0			REV__ENST00000469140.2_1_14:105929892-105933123:+|nuORF	REV__ENST00000469140.2_1_14:105929892-105933123:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	672.4112426638603	2	672.411529	1342.8085	3.2648	0.0021953	-3.1799	-0.0021382	0.084951	5.7122E-05	672.4087617945283	82.576	1.3123	83.789	83.006	84.319	1.2125					60	41	3	0	0	0	1.0372	1	34676	34676		0.96228	0	1	3323200	+		43584	11371	21376	21466	50424	50424					0.15081291547880937
YRNNEWYHHWN	11	Unmodified	_YRNNEWYHHWN_					0	0	0			REV__ENSG00000157350|ENST00000342907|ST3GAL2	REV__ENSG00000157350|ENST00000342907|ST3GAL2	MSMS	GG20161007_CRH_Patient100_A02_02	2	809.8502685427666	2	809.850355	1617.68616	NaN	NaN	NaN	NaN	NaN	NaN	NaN	91.191	1	91.381	90.881	91.881	0.19042								0	0	0	0.63775	1	38201	38201		0	0	1		+		43585	10537	21377	21467	50425	50425					-0.09797777201583813
YRNTPDDEK	9	Unmodified	_YRNTPDDEK_					0	0	0			REV__tr|A0A553SF88|A0A553SF88_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08460PE=3SV=1	REV__tr|A0A553SF88|A0A553SF88_NIACIGfo/Idh/MocAfamilyoxidoreductaseOS=NialliacirculansOX=1397GN=CEQ21_08460PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	379.5110656619072	3	379.843882	1136.50982	-0.045084	-1.7125E-05	3.7127	0.0014102	3.6676	0.0013931	379.8456715528948	15.23	0.20007	16.127	16.022	16.222	0.89665					11	6	3	0	0	0	0.11833	1	6333	6333		2.4985	1.427	1	419120	+		43586	14695	21378	21468	50426	50426					-0.05297831155394306
YRPGKALT	8	Unmodified	_YRPGKALT_					0	0	0			REV__tr|A0A7D6VUE4|A0A7D6VUE4_9CLOTIron-sulfurclusterassemblyscaffoldproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06975PE=3SV=1	REV__tr|A0A7D6VUE4|A0A7D6VUE4_9CLOTIron-sulfurclusterassemblyscaffoldproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06975PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	905.5243408083916	1	905.520328	904.513051	3.0581	0.0027692	-0.21846	-0.00019782	2.8396	0.0025713	905.5206875075382	107.73	0.14893	107.89	107.79	107.94	0.15795					17	7	3	0	0	0	0.89198	1	46360	46360		0	0	1	59988000	+		43587	15513	21379	21469	50427	50427					0.05697508479920543
YRPLRRKG	8	Unmodified	_YRPLRRKG_					0	0	0			REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	REV__ENST00000341901.4_1_16:28304063-28304252:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.3248168826103	2	523.322517	1044.63048	3.2351	0.001693	0.13202	6.9089E-05	3.3671	0.0017621	523.3228593871947	92.746	0.35372	94.023	93.812	94.165	1.277					17	10	2	0	0	0	0.89178	1	39039	39039		0.69038	0	1	974510	+		43588	12499	21380	21470	50428	50428					0.1099508613940543
YRQPSPLSRL	10	Unmodified	_YRQPSPLSRL_					0	0	0			REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8467285037041	2	608.843479	1215.67241	5.1124	0.0031127	-0.82441	-0.00050194	4.288	0.0026107	608.8429999230619	89.548	0.27956	90.568	90.429	90.708	1.0199					22	8	3	0	0	0	0.89803	1	37733	37733		1.4819	0	1	1983900	+		43589	8949	21381	21471	50429	50429					0.07319597037258063
YRQPSPLSRL	10	Unmodified	_YRQPSPLSRL_					0	0	0			REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	608.8445922732353	2	608.843479	1215.67241	4.4428	0.002705	-1.1278	-0.00068667	3.315	0.0020183	608.8429696843318	90.248	0.41739	91.268	91.083	91.5	1.0199					29	12	4	0	0	0	0.88022	1	38019	38019		3.5965	1.5367	1	1777600	+		43590	8949	21381	21471	50430	50430					0.07319597037258063
YRQPSPLSRL	10	Unmodified	_YRQPSPLSRL_					0	0	0			REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	608.8465453982353	2	608.843479	1215.67241	4.3366	0.0026403	-0.54647	-0.00033271	3.7901	0.0023076	608.8431166169538	89.751	0.31775	91.156	90.986	91.304	1.4045					21	9	3	0	0	0	0.88022	1	37783	37783		3.5965	0	1	1721300	+		43591	8949	21381	21471	50431	50431					0.07319597037258063
YRQPSPLSRL	10	Unmodified	_YRQPSPLSRL_					0	0	0			REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	608.843479	1215.67241	2.5129	0.00153	-0.1569	-9.5527E-05	2.356	0.0014345	608.842717867778	91.078	0.22028	91.078	90.968	91.188	0	-0.14009	0.00058845	NaN	3.5965	11	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	363240	+		43592	8949	21381	21471							0.07319597037258063
YRQPSPLSRL	10	Unmodified	_YRQPSPLSRL_					0	0	0			REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	REV__ENST00000471517.5_1_19:38845366-38853372:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	608.843479	1215.67241	2.5401	0.0015465	-0.029402	-1.7901E-05	2.5107	0.0015286	608.8432441878984	91.18	0.2918	91.371	91.173	91.465	0.19041	0.15253	0.0007437	NaN	3.5965	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	263390	+		43593	8949	21381	21471							0.07319597037258063
YRQRQRSRRRR	11	Unmodified	_YRQRQRSRRRR_					0	0	0		ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	539.9855834841728	3	539.984228	1616.93085	1.7694	0.00095544	-0.23962	-0.00012939	1.5298	0.00082605	539.984577019612	93.462	0.85251	93.462	92.953	93.805	0					28	26	2	0	0	0	1.0405	1	39061	39061		0	0	1	580270			43594	4381	21382	21472	50432	50432					0.14706566122708864
YRQRQRSRRRR	11	Unmodified	_YRQRQRSRRRR_					0	0	0		ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	539.984228	1616.93085	2.7029	0.0014595	1.8916	0.0010214	4.5945	0.002481	539.9852008992224	93.384	0.6181	93.552	93.092	93.71	0.16835	-0.02579	0.0014715	NaN	0	23	18	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	346540			43595	4381	21382	21472							0.14706566122708864
YRQRQRSRRRR	11	Unmodified	_YRQRQRSRRRR_					0	0	0		ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	ENSG00000175646|ENST00000312511|PRM1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		3	539.984228	1616.93085	3.3557	0.001812	1.5389	0.00083098	4.8946	0.002643	539.9854523268546	92.393	0.45565	93.72	93.502	93.958	1.3269	0.14179	0.00090013	NaN	0	22	13	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	565500			43596	4381	21382	21472							0.14706566122708864
YRREDSMEDR	10	Unmodified	_YRREDSMEDR_					0	0	0		ENST00000598846.1_1_1:1636463-1654047:-|nuORF;nc|ENSG00000008128|Q9UQ88-9|CDK11A;nc|ENSG00000248333|P21127-6|CDK11B;nc|ENSG00000248333|P21127-9|CDK11B;nc|ENSG00000008128|Q9UQ88-4|CDK11A;nc|ENSG00000248333|P21127-8|CDK11B;nc|ENSG00000008128|Q9UQ88-3|CDK11A;ENSG00000008128|ENST00000404249|CDK11A;nc|ENSG00000248333|P21127-3|CDK11B;ENSG00000248333|ENST00000341832|CDK11B;nc|ENSG00000008128|Q9UQ88|CDK11A;nc|ENSG00000248333|P21127|CDK11B	ENST00000598846.1_1_1:1636463-1654047:-|nuORF	ENST00000598846.1_1_1:1636463-1654047:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	452.8712341189384	3	452.870214	1355.58881	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8353	1	6.5661	6.0661	7.0661	0.73074								0	0	0	0.66255	1	2420	2420		0.13989	0	1				43597	525	21383	21473	50433	50433					-0.07475927192763265
YRRIIIPI	8	Unmodified	_YRRIIIPI_					0	0	0			REV__ENSG00000100142|ENST00000442738|POLR2F	REV__ENSG00000100142|ENST00000442738|POLR2F	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	522.3401977419853	2	522.339844	1042.66514	1.4549	0.00075993	0.1257	6.566E-05	1.5806	0.00082559	522.3397743417383	107.61	0.20982	107.61	107.51	107.72	0					47	10	6	0	0	0	0.89198	1	46198	46198		0	0	1	276770000	+		43598	8968	21384	21474	50434	50434					0.14550909227523334
YRRSYDSDF	9	Unmodified	_YRRSYDSDF_					0	0	0		nc|ENSG00000163071|Q8TC71-2|SPATA18;ENSG00000163071|ENST00000295213|SPATA18	nc|ENSG00000163071|Q8TC71-2|SPATA18	nc|ENSG00000163071|Q8TC71-2|SPATA18	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	604.7729369997978	2	604.770177	1207.5258	2.0281	0.0012265	3.3285	0.002013	5.3565	0.0032395	604.7723106840883	48.387	1.5749	50.364	49.837	51.412	1.9772					138	50	3	0	0	0	0.46905	1	20517	20517		16.942	1.0951	1	4746800			43599	3662	21385	21475	50435	50435					-0.06966124918471905
YRRTKIRTT	9	Unmodified	_YRRTKIRTT_					0	0	0		L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|46|3|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|46|3|sense	L1MEc_dup2383|chr2:89575914-89577159:-|1.0505817924982768|0.1474267064561223|2.83|423.0|46|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	597.8584472537041	2	597.856921	1193.69929	1.9121	0.0011431	-0.56338	-0.00033682	1.3487	0.00080632	597.8563847285099	77.13	3.3504	77.446	76.479	79.829	0.31653					311	106	4	0	0	0	0.85019	1	32625	32625		0.52476	0	1	11246000			43600	7715	21386	21476	50436	50436					0.11018705648439209
YRSRYHGGHHW	11	Unmodified	_YRSRYHGGHHW_					0	0	0			REV__ENSG00000130812|ENST00000253109|ANGPTL6	REV__ENSG00000130812|ENST00000253109|ANGPTL6	MSMS	GG20161007_CRH_Patient100_A02_02	2	485.8975097537041	3	485.897426	1454.67045	NaN	NaN	NaN	NaN	NaN	NaN	NaN	0.18107	1	0.33951	-0.16049	0.83951	0.15844								0	0	0	0.63775	1	74	74		0	0	1		+		43601	9804	21387	21477	50437	50437					-0.038700189279779806
YRVKRKAR	8	Unmodified	_YRVKRKAR_					0	0	0			REV__ENSG00000050030|ENST00000055682|NEXMIF	REV__ENSG00000050030|ENST00000055682|NEXMIF	MSMS	GG20161007_CRH_Patient100_A02_01	1	538.8453246951103	2	538.843616	1075.67268	NaN	NaN	NaN	NaN	NaN	NaN	NaN	11.271	1	11.271	10.771	11.771	0								0	0	0	1.0178	1	4655	4655		0.69038	0	1		+		43602	8619	21388	21478	50438	50438					0.13787061547782287
YRVLLPGV	8	Unmodified	_YRVLLPGV_					0	0	0		nc|ENSG00000137474|Q13402-3|MYO7A;nc|ENSG00000137474|Q13402-4|MYO7A;nc|ENSG00000137474|Q13402-5|MYO7A;nc|ENSG00000137474|Q13402-8|MYO7A;nc|ENSG00000137474|Q13402-2|MYO7A;nc|ENSG00000137474|Q13402-7|MYO7A;nc|ENSG00000137474|Q13402-6|MYO7A;ENSG00000137474|ENST00000409709|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	nc|ENSG00000137474|Q13402-3|MYO7A	MSMS	GG20161007_CRH_Patient100_A02_01	1	306.1909973025322	3	306.192006	915.554188	NaN	NaN	NaN	NaN	NaN	NaN	NaN	34.01	1	34.01	33.51	34.51	0								0	0	0	1.0178	1	14252	14252		0	0	1				43603	2769	21389	21479	50439	50439					0.09303269519432433
YRVLQRANL	9	Unmodified	_YRVLQRANL_					0	0	0		nc|ENSG00000166886|Q15742-2|NAB2;nc|ENSG00000166886|Q15742-3|NAB2;ENSG00000166886|ENST00000300131|NAB2	nc|ENSG00000166886|Q15742-2|NAB2	nc|ENSG00000166886|Q15742-2|NAB2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.8351928591728	2	566.832914	1131.65128	3.1815	0.0018034	1.2641	0.00071652	4.4456	0.0025199	566.833676066789	60.719	0.30557	62.685	62.514	62.82	1.9653					16	9	2	0	0	0	0.5697	1	25473	25473		12.532	1.7076	1	2060400			43604	3928	21390	21480	50440	50440					0.0907163172842047
YSALKKRYNFF	11	Unmodified	_YSALKKRYNFF_					0	0	0			REV__ENSG00000105877|ENST00000409508|DNAH11	REV__ENSG00000105877|ENST00000409508|DNAH11	MSMS	GG20161007_CRH_Patient100_W632_01	3	718.8901244997978	2	718.887887	1435.76122	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.576	1	49.964	49.464	50.464	1.388								0	0	0	0.63775	1	20334	20334		5.7319	0.43497	1		+		43605	9194	21391	21481	50441	50441					0.060770122769099544
YSALREIAF	9	Unmodified	_YSALREIAF_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.2886840701103	2	535.287474	1068.5604	1.9078	0.0010212	0.17548	9.3933E-05	2.0833	0.0011152	535.2875921604536	49.244	0.62009	50.635	50.391	51.011	1.3911					57	19	4	0	0	0	0.0051116	2	20614	20566;20614		121.53	79.694	1	8317300			43606	1605	21392	21482	50442;50443	50443					0.028857429602794582
YSALREIAF	9	Unmodified	_YSALREIAF_					0	0	0		nc|ENSG00000107669|O95260-2|ATE1;ENSG00000107669|ENST00000224652|ATE1	nc|ENSG00000107669|O95260-2|ATE1	nc|ENSG00000107669|O95260-2|ATE1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.2884399294853	2	535.287474	1068.5604	2.1335	0.001142	-0.12694	-6.7948E-05	2.0065	0.0010741	535.2872809405969	48.709	0.49426	50.686	50.453	50.947	1.9772					50	15	4	0	0	0	0.0080484	2	20368	20368;20416		110.55	66.694	1	10055000			43607	1605	21392	21482	50444;50445	50444					0.028857429602794582
YSAPVIHVL	9	Unmodified	_YSAPVIHVL_					0	0	0		nc|ENSG00000116984|Q99707-2|MTR;ENSG00000116984|ENST00000366577|MTR	nc|ENSG00000116984|Q99707-2|MTR	nc|ENSG00000116984|Q99707-2|MTR	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	499.7870971560478	2	499.78711	997.559667	1.3353	0.00066739	-2.5572	-0.001278	-1.2218	-0.00061066	499.78425471389573	48.583	0.33705	49.971	49.833	50.17	1.388					15	10	2	0	0	0	0.20838	1	20347	20347		32.117	15.175	1	910760			43608	1993	21393	21483	50446	50446					0.06078948311221666
YSAVYKIALF	10	Unmodified	_YSAVYKIALF_					0	0	0			REV__ENSG00000153002|ENST00000282957|CPB1	REV__ENSG00000153002|ENST00000282957|CPB1	MSMS	GG20161007_CRH_Patient100_W632_01	3	587.8290893435478	2	587.828975	1173.6434	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.595	1	97.823	97.323	98.323	0.22776								0	0	0	0.65703	1	41070	41070		7.9102	1.187	1		+		43609	10438	21394	21484	50447	50447					0.06352059688265399
YSCSTGTG	8	Unmodified	_YSCSTGTG_					0	0	0		ENST00000558065.1_1_15:90771534-90771594:+|nuORF	ENST00000558065.1_1_15:90771534-90771594:+|nuORF	ENST00000558065.1_1_15:90771534-90771594:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1496765017509	2	388.149986	774.285419	NaN	NaN	NaN	NaN	NaN	NaN	NaN	32.472	1	34.297	33.797	34.797	1.8246								0	0	0	1.0178	1	13610	13610		0.79363	0	1				43610	7312	21395	21485	50448	50448					-0.11075237510192437
YSCYFNSLL	9	Unmodified	_YSCYFNSLL_					0	0	0		ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	555.2512084841728	2	555.252243	1108.48993	2.7431	0.0015231	-3.1076	-0.0017255	-0.36447	-0.00020237	555.2507070495398	79.065	0.4697	80.332	80.034	80.504	1.2668					43	14	4	0	0	0	0.32838	1	33236	33236		24.021	1.2843	1	8586500			43611	7078	21396	21486	50449	50449					-0.05997298419697472
YSCYFNSLL	9	Unmodified	_YSCYFNSLL_					0	0	0		ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	ENST00000520235.1_1_8:69103966-69132518:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	555.2518798708916	2	555.252243	1108.48993	2.2537	0.0012514	-2.9777	-0.0016534	-0.72402	-0.00040201	555.2507190457908	78.538	0.46716	80.273	80.07	80.537	1.735					44	14	4	0	0	0	0.18809	1	32958	32958		34.402	0	1	8277600			43612	7078	21396	21486	50450	50450					-0.05997298419697472
YSDFTHNII	9	Unmodified	_YSDFTHNII_					0	0	0			REV__tr|A0A553SPC4|A0A553SPC4_NIACILargeribosomalsubunitassemblyfactorBipAOS=NialliacirculansOX=1397GN=typAPE=3SV=1	REV__tr|A0A553SPC4|A0A553SPC4_NIACILargeribosomalsubunitassemblyfactorBipAOS=NialliacirculansOX=1397GN=typAPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	555.7650634646416	2	555.266739	1108.51892	2.5965	0.0014418	0.7892	0.00043821	3.3857	0.00188	555.2676629077346	75.356	0.30119	76.662	76.435	76.736	1.3063					17	9	3	0	0	0	0.11645	1	31536	31536		8.5933	0	1	1978400	+		43613	15082	21397	21487	50451	50451					-0.030994377990509747
YSDGHDGNEF	10	Unmodified	_YSDGHDGNEF_					0	0	0			REV__ENSG00000137674|ENST00000260228|MMP20	REV__ENSG00000137674|ENST00000260228|MMP20	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.7190429568291	2	570.715067	1139.41558	2.8278	0.0016139	1.2379	0.00070648	4.0657	0.0023204	570.715813105653	79.064	0.43758	80.331	80.066	80.504	1.2668					75	13	7	0	0	0	0.78468	1	33177	33177		13.906	2.2658	1	13392000	+		43614	10026	21398	21488	50452	50452					-0.1485496997752307
YSEDDYELE	9	Unmodified	_YSEDDYELE_					0	0	0			REV__nc|ENSG00000099139|Q92824|PCSK5	REV__nc|ENSG00000099139|Q92824|PCSK5	MSMS	GG20161007_CRH_Patient100_W632_02	4	388.1526672244072	3	388.15227	1161.43498	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.071	1	20.595	20.095	21.095	1.5237								0	0	0	0.42693	1	7929	7929		0	0	1		+		43615	8942	21399	21489	50453	50453					-0.13928058477290506
YSEEEMIII	9	Unmodified	_YSEEEMIII_					0	0	0		tr|A0A553SQQ1|A0A553SQQ1_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_07110PE=4SV=1	tr|A0A553SQQ1|A0A553SQQ1_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_07110PE=4SV=1	tr|A0A553SQQ1|A0A553SQQ1_NIACIGNATfamilyN-acetyltransferaseOS=NialliacirculansOX=1397GN=CEQ21_07110PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.2180663943291	2	563.770465	1125.52638	2.7756	0.0015648	-0.71825	-0.00040493	2.0574	0.0011599	564.2718338950282	79.572	0.15625	80.824	80.769	80.925	1.2512					6	4	2	0	0	0	0.11463	1	33420	33420		12.532	4.6214	1	880390			43616	16524	21400	21490	50454	50454					-0.031364663136173476
YSEGEEDSPL	10	Unmodified	_YSEGEEDSPL_					0	0	0			REV__ENSG00000181195|ENST00000451791|PENK	REV__ENSG00000181195|ENST00000451791|PENK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	563.2350952029228	2	563.232758	1124.45096	2.8591	0.0016104	2.2423	0.001263	5.1015	0.0028733	563.2337993802807	79.065	0.43758	80.332	80.066	80.504	1.2668					31	13	3	0	0	0	0.5476	2	33159	33159;33207		25.399	1.3787	1	3369400	+		43617	11317	21401	21491	50455;50456	50455					-0.1062835224038281
YSEGEEDSPL	10	Unmodified	_YSEGEEDSPL_					0	0	0			REV__ENSG00000181195|ENST00000451791|PENK	REV__ENSG00000181195|ENST00000451791|PENK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.2349731326103	2	563.232758	1124.45096	2.3406	0.0013183	1.8383	0.0010354	4.179	0.0023537	563.2333346875239	78.538	0.40533	80.273	80.101	80.506	1.735					28	12	3	0	0	0	0.5476	1	32986	32986		25.399	0.40835	1	3947700	+		43618	11317	21401	21491	50457	50457					-0.1062835224038281
YSEGEEDSPL	10	Unmodified	_YSEGEEDSPL_					0	0	0			REV__ENSG00000181195|ENST00000451791|PENK	REV__ENSG00000181195|ENST00000451791|PENK	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	563.232758	1124.45096	2.8591	0.0016104	2.2423	0.001263	5.1015	0.0028733	563.2337993802807	79.065	0.43758	80.332	80.066	80.504	1.2668	0.02952	0.00013901	NaN	25.399	31	13	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3369400	+		43619	11317	21401	21491							-0.1062835224038281
YSFTTVKLL	9	Unmodified	_YSFTTVKLL_					0	0	0		ENST00000555826.5_1_14:45369638-45373733:+|nuORF;ENSG00000179476|ENST00000325192|C14orf28	ENST00000555826.5_1_14:45369638-45373733:+|nuORF	ENST00000555826.5_1_14:45369638-45373733:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	536.3091308474541	2	536.307875	1070.6012	2.3467	0.0012586	-0.83812	-0.00044949	1.5086	0.00080908	536.3074880018561	84.217	0.27674	85.814	85.612	85.888	1.5962					15	8	2	0	0	0	0.44535	1	35315	35315		18.135	6.4947	1	5258800			43620	4517	21402	21492	50458	50458					0.06872084279916635
YSFYLPSPP	9	Unmodified	_YSFYLPSPP_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|204|3|anti-sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|204|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.7653686404228	2	535.7633	1069.51205	2.3313	0.001249	0.33338	0.00017861	2.6647	0.0014277	535.7644235306591	68.313	0.36798	69.69	69.491	69.859	1.3778					17	11	2	0	0	0	0.39927	1	28686	28686		20.454	4.6064	1	4079300	+		43621	14213	21403	21493	50459	50459					-0.019927506796193484
YSFYLPSPP	9	Unmodified	_YSFYLPSPP_					0	0	0			REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|204|3|anti-sense	REV__HERVK14-int_dup255|chr11:73939531-73943269:-|1.4488852815763655|0.2858411187947689|2.34|427.0|204|3|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.7647582888603	2	535.7633	1069.51205	2.1138	0.0011325	-0.65169	-0.00034915	1.4621	0.00078334	535.7639825505524	67.771	0.34002	69.641	69.427	69.767	1.87					31	10	4	0	0	0	0.39927	1	28453	28453		20.454	4.6064	1	2650400	+		43622	14213	21403	21493	50460	50460					-0.019927506796193484
YSGGGGDG	8	Unmodified	_YSGGGGDG_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	335.1833984255791	2	335.127368	668.240183	2.0945	0.00070194	-0.79697	-0.00026709	1.2976	0.00043485	335.12676758899084	90.708	0.70585	90.917	90.616	91.321	0.20904					32	21	2	0	0	0	2.3239	1	38123	38123		0	0	1	633700	+		43623	9797	21404	21494	50461	50461					-0.10720719981088678
YSGGGGDG	8	Unmodified	_YSGGGGDG_					0	0	0			REV__ENSG00000130749|ENST00000253048|ZC3H4	REV__ENSG00000130749|ENST00000253048|ZC3H4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	335.1277953982353	2	335.127368	668.240183	3.8001	0.0012735	-0.50433	-0.00016901	3.2958	0.0011045	335.1266485645055	89.773	0.66225	91.178	90.858	91.52	1.4045					46	20	3	0	0	0	0.89198	1	37925	37925		0	0	1	1021200	+		43624	9797	21404	21494	50462	50462					-0.10720719981088678
YSGGGGGC	8	Unmodified	_YSGGGGGC_					0	0	0			REV__ENSG00000189182|ENST00000341809|KRT77	REV__ENSG00000189182|ENST00000341809|KRT77	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	657.6455566287041	1	657.229701	656.222425	2.9624	0.001947	-1.9495	-0.0012813	1.0129	0.00066568	657.2328898747792	109.91	0.15101	110.07	109.96	110.11	0.16133					6	4	2	0	0	0	2.3239	1	47716	47716		0	0	1	408890	+	+	43625	8395	21405	21495	50463	50463					-0.11943758507595703
YSHFEVQPH	9	Unmodified	_YSHFEVQPH_					0	0	0			REV__nc|ENSG00000178662|Q8WYN3-2|CSRNP3	REV__nc|ENSG00000178662|Q8WYN3-2|CSRNP3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	381.5114013552666	3	381.845446	1142.51451	0.15165	5.7906E-05	-2.6594	-0.0010155	-2.5077	-0.00095757	381.84450261613864	19.784	0.24385	21.308	21.196	21.439	1.5237					10	7	2	0	0	0	0.11909	1	8257	8257		2.4985	0.41248	1	324070	+		43626	11251	21406	21496	50464	50464					-0.05104902221955854
YSIIPFIIL	9	Unmodified	_YSIIPFIIL_					0	0	0		tr|A0A553SR44|A0A553SR44_NIACINa+/H+antiporterNhaCOS=NialliacirculansOX=1397GN=CEQ21_00265PE=3SV=1	tr|A0A553SR44|A0A553SR44_NIACINa+/H+antiporterNhaCOS=NialliacirculansOX=1397GN=CEQ21_00265PE=3SV=1	tr|A0A553SR44|A0A553SR44_NIACINa+/H+antiporterNhaCOS=NialliacirculansOX=1397GN=CEQ21_00265PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	540.3335449099541	2	539.830986	1077.64742	1.9733	0.0010653	0.75507	0.00040761	2.7284	0.0014729	540.331708453517	83.232	0.40852	84.87	84.665	85.074	1.6379					22	12	3	0	0	0	0.66458	1	34950	34950		13.508	0	1	1307400			43627	16541	21407	21497	50465	50465					0.11170149181998568
YSLEKVFGI	9	Unmodified	_YSLEKVFGI_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	528.2935058474541	2	528.292225	1054.5699	1.9019	0.0010048	0.6233	0.00032929	2.5252	0.001334	528.2921681539024	65.428	0.32215	65.428	65.289	65.612	0					23	9	3	0	0	0	0.053939	2	27265	27265;27316		66.457	12.624	1	1311900			43628	1387	21408	21498	50466;50467	50466					0.04479511245813228
YSLEKVFGI	9	Unmodified	_YSLEKVFGI_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	528.2931396365166	2	528.292225	1054.5699	2.0639	0.0010903	0.32282	0.00017054	2.3867	0.0012609	528.2924800547008	64.884	0.3489	65.21	65.007	65.356	0.32689					26	10	3	0	0	0	0.036104	1	27156	27156		79.596	13.14	1	1947500			43629	1387	21408	21498	50468	50468					0.04479511245813228
YSLEKVFGI	9	Unmodified	_YSLEKVFGI_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	528.2935058474541	2	528.292225	1054.5699	2.1708	0.0011468	0.53747	0.00028394	2.7083	0.0014308	528.2924785707919	63.624	0.59647	65.037	64.876	65.472	1.4134					42	18	3	0	0	0	0.0037498	2	26693	26693;26744		125.53	14.854	1	7377200			43630	1387	21408	21498	50469;50470	50469					0.04479511245813228
YSLEKVFGI	9	Unmodified	_YSLEKVFGI_					0	0	0		nc|ENSG00000102316|Q9UNF1-2|MAGED2;ENSG00000102316|ENST00000375068|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	nc|ENSG00000102316|Q9UNF1-2|MAGED2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	528.2933227419853	2	528.292225	1054.5699	2.3479	0.0012404	-0.3509	-0.00018538	1.997	0.001055	528.2922305998931	63.081	0.43402	65.025	64.814	65.248	1.9444					33	13	3	0	0	0	0.0070725	1	26470	26470		114.2	14.446	1	6737500			43631	1387	21408	21498	50471	50471					0.04479511245813228
YSLHFDAFH	9	Unmodified	_YSLHFDAFH_					0	0	0		ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	379.5110656619072	3	379.510174	1135.50869	-0.61508	-0.00023343	3.2582	0.0012365	2.6431	0.0010031	379.51141532715934	15.354	0.21572	16.181	16.046	16.262	0.82643					14	6	3	0	0	0	0.59203	1	6390	6390		7.609	5.1105	1	1304100			43632	1104	21409	21499	50472	50472					-0.053640007336070994
YSLHFDAFH	9	Unmodified	_YSLHFDAFH_					0	0	0		ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	ENSG00000088538|ENST00000266037|DOCK3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	379.5108215212822	3	379.510174	1135.50869	-0.052523	-1.9933E-05	2.155	0.00081786	2.1025	0.00079793	379.5112149401738	15.05	0.38514	15.946	15.837	16.222	0.89664					19	12	3	0	0	0	0.5697	1	6247	6247		8.1555	0	1	1250300			43633	1104	21409	21499	50473	50473					-0.053640007336070994
YSLIRLHFIPR	11	Unmodified	_YSLIRLHFIPR_					0	0	0		ENSG00000103160|ENST00000219439|HSDL1;nc|ENSG00000103160|Q3SXM5-2|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	ENSG00000103160|ENST00000219439|HSDL1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	472.2860595583916	3	472.282106	1413.82449	3.1183	0.0014727	-0.53634	-0.0002533	2.582	0.0012194	472.28123472315633	87.177	1.8927	87.177	86.84	88.732	0					108	67	2	0	0	0	1.0357	1	36628	36628		1.4551	0.12547	1	5550500			43634	1419	21410	21500	50474	50474					0.13412997784826075
YSLSKHLRH	9	Unmodified	_YSLSKHLRH_					0	0	0		nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF	nc|ENSG00000134686|Q8IXK0-3|PHC2	nc|ENSG00000134686|Q8IXK0-3|PHC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.8210327029228	2	570.817264	1139.61998	3.1756	0.0018127	4.4357	0.002532	7.6112	0.0043446	570.8199328738956	103.2	0.085777	103.36	103.32	103.41	0.16445					6	2	3	0	0	0	0.76103	1	43486	43486		4.3292	0	1	5774400			43635	6858	21411	21501	50475	50475					0.055750586943076996
YSLSKHLRH	9	Unmodified	_YSLSKHLRH_					0	0	0		nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF	nc|ENSG00000134686|Q8IXK0-3|PHC2	nc|ENSG00000134686|Q8IXK0-3|PHC2	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		2	570.817264	1139.61998	2.636	0.0015047	2.8415	0.001622	5.4774	0.0031266	570.8193426837771	103.25	0.080788	103.31	103.24	103.32	0.059502	-0.028546	-0.0018161	NaN	4.3292	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6316600			43636	6858	21411	21501							0.055750586943076996
YSLSKHLRH	9	Unmodified	_YSLSKHLRH_					0	0	0		nc|ENSG00000134686|Q8IXK0-3|PHC2;ENST00000485928.5_1_1:33791428-33799821:-|nuORF	nc|ENSG00000134686|Q8IXK0-3|PHC2	nc|ENSG00000134686|Q8IXK0-3|PHC2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	570.817264	1139.61998	3.2813	0.001873	6.0661	0.0034627	9.3475	0.0053357	570.8207799615346	103.16	0.087791	103.34	103.26	103.35	0.18066	0.0011826	0.0018653	NaN	4.3292	4	2	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6547900			43637	6858	21411	21501							0.055750586943076996
YSLSLQTNR	9	Unmodified	_YSLSLQTNR_					0	0	0		chr12:48925678-48939655|97|22.74|0.97|4.54|-|1|None,ARF3|1	chr12:48925678-48939655|97|22.74|0.97|4.54|-|1|None,ARF3|1	chr12:48925678-48939655|97|22.74|0.97|4.54|-|1|None,ARF3|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	541.2853271365166	2	541.285463	1080.55637	1.0036	0.00054324	-0.42154	-0.00022817	0.58207	0.00031507	541.2852859897133	21.023	0.1758	22.148	22.043	22.219	1.1254					8	5	2	0	0	0	0.30098	1	8766	8766		25.399	0	1	626430			43638	190	21412	21502	50476	50476					0.01931653466544958
YSNIRPIGKGG	11	Unmodified	_YSNIRPIGKGG_					0	0	0			REV__nc|ENSG00000103423|Q96EY1-3|DNAJA3	REV__nc|ENSG00000103423|Q96EY1-3|DNAJA3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	581.8190185427666	2	581.32238	1160.63021	2.0933	0.0012169	0.042664	2.4802E-05	2.136	0.0012417	581.3252734774259	68.229	0.76974	69.607	69.364	70.134	1.3778					49	24	3	0	0	0	0.66268	1	28689	28689		19.362	3.5148	1	5506100	+		43639	9106	21413	21503	50477	50477					0.056316216288678334
YSNQQFQPVM	10	Unmodified	_YSNQQFQPVM_					0	0	0		ENSG00000141232|ENST00000499247|TOB1	ENSG00000141232|ENST00000499247|TOB1	ENSG00000141232|ENST00000499247|TOB1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2871581912041	2	621.284605	1240.55466	1.9003	0.0011807	-1.9594	-0.0012173	-0.059009	-3.6662E-05	621.2841449295379	47.998	0.39924	49.975	49.806	50.206	1.9772					30	12	3	0	0	0	0.78468	2	20073	20073;20121		13.906	5.7505	1	3535100			43640	2949	21414	21504	50478;50479	50478					-0.05599723613704555
YSNYSSNEEL	10	Unmodified	_YSNYSSNEEL_					0	0	0		tr|A0A7D7AEF8|A0A7D7AEF8_9CLOTSpermidine/putrescineABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02345PE=4SV=1	tr|A0A7D7AEF8|A0A7D7AEF8_9CLOTSpermidine/putrescineABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02345PE=4SV=1	tr|A0A7D7AEF8|A0A7D7AEF8_9CLOTSpermidine/putrescineABCtransportersubstrate-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_02345PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	402.1802245974541	3	402.503414	1204.48841	1.3358	0.00053765	0.023422	9.4276E-06	1.3592	0.00054708	402.8376933479741	66.741	0.32911	68.63	68.404	68.733	1.8889					17	10	2	0	0	0	0.12559	1	28020	28020		0.15932	0	1	1559600			43641	17334	21415	21505	50480	50480					-0.10565260974749435
YSPLGLRWL	9	Unmodified	_YSPLGLRWL_					0	0	0			REV__PORCN|p.E281Dfs*4|1|0.2|ENSG00000102312|chrX:48514362-48514362|A/-|frameshift_variant	REV__PORCN|p.E281Dfs*4|1|0.2|ENSG00000102312|chrX:48514362-48514362|A/-|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	552.2747680544853	2	552.813659	1103.61277	2.6567	0.0014687	-1.2619	-0.0006976	1.3948	0.00077106	552.8134865084401	75.906	0.24342	77.673	77.507	77.751	1.7672					13	7	2	0	0	0	0.11071	1	31841	31841		10.824	0.75	1	595330	+		43642	9067	21416	21506	50481	50481					0.06510326093894037
YSPLPPLPSL	10	Unmodified	_YSPLPPLPSL_					0	0	0			REV__ENST00000311481.10_1_11:66044108-66044312:+|nuORF	REV__ENST00000311481.10_1_11:66044108-66044312:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	542.3096801638603	2	542.307875	1082.6012	3.4504	0.0018712	0.12091	6.5571E-05	3.5713	0.0019368	542.3077464217404	81.318	0.39829	83.014	82.86	83.258	1.6959					35	12	4	0	0	0	0.77604	1	34211	34211		14.838	3.198	1	5904200	+		43643	12369	21417	21507	50482	50482					0.06320084279923321
YSPVLGSFLI	10	Unmodified	_YSPVLGSFLI_					0	0	0		nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2	nc|ENSG00000166473|Q7Z442-2|PKD1L2	nc|ENSG00000166473|Q7Z442-2|PKD1L2	MSMS	GG20161007_CRH_Patient100_W632_01	3	548.3069946169853	2	548.307875	1094.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.052	1	59.47	58.97	59.97	1.4181								0	0	0	0.64559	1	24339	24339		18.146	4.2403	1				43644	7918	21418	21508	50483	50483					0.05768084279907271
YSPVLGSFLI	10	Unmodified	_YSPVLGSFLI_					0	0	0		nc|ENSG00000166473|Q7Z442-2|PKD1L2;nc|ENSG00000166473|Q7Z442|PKD1L2	nc|ENSG00000166473|Q7Z442-2|PKD1L2	nc|ENSG00000166473|Q7Z442-2|PKD1L2	MSMS	GG20161007_CRH_Patient100_W632_02	4	548.3082153201103	2	548.307875	1094.6012	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.562	1	59.531	59.031	60.031	1.9684								0	0	0	0.64559	1	24145	24145		18.146	4.2403	1				43645	7918	21418	21508	50484	50484					0.05768084279907271
YSQKGLLI	8	Unmodified	_YSQKGLLI_					0	0	0		tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	461.2756835818291	2	461.273835	920.533118	3.2352	0.0014923	2.8041	0.0012935	6.0393	0.0027858	461.27514522247736	87.139	0.38652	87.383	87.264	87.65	0.24387					32	13	3	0	0	0	0.89008	1	36524	36524		2.5775	0	1	6514500			43646	17162	21419	21509	50485	50485					0.06967259419923266
YSQKGLLI	8	Unmodified	_YSQKGLLI_					0	0	0		tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	tr|A0A7D6ZW07|A0A7D6ZW07_9CLOTABCtransporterATP-bindingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_17125PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	461.273835	920.533118	2.7834	0.0012839	3.6118	0.001666	6.3952	0.0029499	461.27571395812384	87.683	0.55163	87.683	87.357	87.909	0	0.1499	0.00036783	NaN	2.5775	42	18	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	6326300			43647	17162	21419	21509							0.06967259419923266
YSRILNYLF	9	Unmodified	_YSRILNYLF_					0	0	0		ENST00000482131.1_1_1:35827333-35836274:+|nuORF	ENST00000482131.1_1_1:35827333-35836274:+|nuORF	ENST00000482131.1_1_1:35827333-35836274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8263427615166	2	594.824224	1187.63389	2.2385	0.0013315	1.241	0.0007382	3.4795	0.0020697	594.8244997120429	68.296	0.49519	69.674	69.364	69.859	1.3778					31	15	3	0	0	0	0.082274	2	28656	28609;28656		60.074	0	1	2820900			43648	6832	21420	21510	50486;50487	50487					0.04758291402731629
YSRILNYLF	9	Unmodified	_YSRILNYLF_					0	0	0		ENST00000482131.1_1_1:35827333-35836274:+|nuORF	ENST00000482131.1_1_1:35827333-35836274:+|nuORF	ENST00000482131.1_1_1:35827333-35836274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8242065310478	2	594.824224	1187.63389	1.8521	0.0011017	1.4575	0.00086696	3.3096	0.0019686	594.8242547181798	67.663	0.49834	69.533	69.268	69.767	1.87					34	15	3	0	0	0	0.087985	2	28362	28362;28410		51.63	0	1	3061300			43649	6832	21420	21510	50488;50489	50488					0.04758291402731629
YSRKRVGCV	9	Unmodified	_YSRKRVGCV_					0	0	0			REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	REV__ENST00000354485.5_1_9:676972-730286:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	533.8185302615166	2	534.292568	1066.57058	2.587	0.0013822	-2.151	-0.0011493	0.43595	0.00023292	534.291721448998	65.754	0.67636	67.152	66.694	67.37	1.3989					35	21	2	0	0	0	0.11568	1	27398	27398		10.824	0	1	4283200	+		43650	9220	21421	21511	50490	50490					0.03996027413859338
YSRLQRKSLA	10	Unmodified	_YSRLQRKSLA_					0	0	0		ENSG00000171094|ENST00000389048|ALK;ALK|p.K507Efs*29|1|0.1|ENSG00000171094|chr2:29320779-29320780|-/CC|frameshift_variant	ENSG00000171094|ENST00000389048|ALK	ENSG00000171094|ENST00000389048|ALK	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	611.3621703982353	2	611.356754	1220.69895	2.6943	0.0016472	-0.37319	-0.00022815	2.3211	0.001419	611.3562611766833	75.754	1.6055	77.521	76.716	78.321	1.7672					95	51	2	0	0	0	0.85604	1	31612	31612		6.2058	1.8765	1	3638600			43651	4176	21422	21512	50491	50491					0.09743285928607293
YSRQRFRK	8	Unmodified	_YSRQRFRK_					0	0	0			REV__ENSG00000124459|ENST00000269973|ZNF45	REV__ENSG00000124459|ENST00000269973|ZNF45	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.8227416872978	2	570.822881	1139.63121	3.2813	0.001873	-3.7736	-0.002154	-0.49227	-0.000281	570.8207799615346	103.16	0.087791	103.34	103.26	103.35	0.18066					4	2	2	0	0	0	0.88504	1	43418	43418		5.7604	0.028577	1	6547900	+		43652	9647	21423	21513	50492	50492					0.06697880788465227
YSRTLRQF	8	Unmodified	_YSRTLRQF_					0	0	0			REV__ENSG00000102359|ENST00000373004|SRPX2	REV__ENSG00000102359|ENST00000373004|SRPX2	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	536.1639892458916	2	535.790715	1069.56688	4.2452	0.0022746	3.9857	0.0021355	8.2309	0.0044101	535.7925536335796	90.725	0.22401	91.707	91.622	91.846	0.98157					9	6	2	0	0	0	2.3239	1	38225	38225		5.7604	1.0044	1	295420	+		43653	9069	21424	21514	50493	50493					0.03487680911666757
YSSCTGPE	8	Unmodified	_YSSCTGPE_					0	0	0		ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	ENSG00000153404|ENST00000637938|PLEKHG4B	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	843.3190185427666	1	843.31891	842.311634	1.2197	0.0010286	0.28894	0.00024367	1.5086	0.0012723	843.3183759634933	102.15	0.13564	102.15	102.07	102.21	0					10	4	3	0	0	0	0.89008	1	42792	42792		2.5775	0	1	7869600			43654	3357	21425	21515	50494	50494					-0.11582968338723276
YSSFPRHLL	9	Unmodified	_YSSFPRHLL_					0	0	0		ENST00000544245.1_12:9098881-9102125:-|nuORF	ENST00000544245.1_12:9098881-9102125:-|nuORF	ENST00000544245.1_12:9098881-9102125:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	560.3027221560478	2	560.300916	1118.58728	2.6764	0.0014996	0.95714	0.00053628	3.6336	0.0020359	560.3011951406661	108.48	0.21723	108.53	108.4	108.62	0.050652					45	12	4	0	0	0	0.83753	1	46650	46650		1.8442	0	1	443460000			43655	7228	21426	21516	50495	50495					0.03272851571477986
YSSGLVRLY	9	Unmodified	_YSSGLVRLY_					0	0	0		ENSG00000115827|ENST00000375255|DCAF17;ENST00000468592.5_1_2:172300063-172325523:+|nuORF	ENSG00000115827|ENST00000375255|DCAF17	ENSG00000115827|ENST00000375255|DCAF17	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2889282107353	2	529.287474	1056.5604	2.2668	0.0011998	1.9975	0.0010573	4.2643	0.0022571	529.2884416878104	40.449	0.25107	42.312	42.171	42.422	1.8624					13	7	2	0	0	0	0.35391	1	16978	16978		22.736	6.8891	1	726440			43656	1938	21427	21517	50496	50496					0.03437742960295509
YSSGLVRLY	9	Unmodified	_YSSGLVRLY_					0	0	0		ENSG00000115827|ENST00000375255|DCAF17;ENST00000468592.5_1_2:172300063-172325523:+|nuORF	ENSG00000115827|ENST00000375255|DCAF17	ENSG00000115827|ENST00000375255|DCAF17	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	529.287474	1056.5604	2.3336	0.0012351	1.9522	0.0010333	4.2858	0.0022684	529.2885213142802	40.825	0.28226	42.151	42.054	42.336	1.3254	-0.08044	-1.9212E-05	NaN	22.736	13	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	663540			43657	1938	21427	21517							0.03437742960295509
YSSSPCLYMF	10	Unmodified	_YSSSPCLYMF_					0	0	0			REV__ENSG00000172772|ENST00000395079|OR10W1	REV__ENSG00000172772|ENST00000395079|OR10W1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.2536498904228	2	599.251385	1196.48822	2.9174	0.0017482	3.4797	0.0020852	6.3971	0.0038335	599.2531736706703	74.626	0.31463	76.408	76.26	76.575	1.7817					20	9	3	0	0	0	0.6819	1	31313	31313		19.257	5.3509	1	1353300	+		43658	11073	21428	21518	50497	50497					-0.10216675499964367
YSSSPCLYMF	10	Unmodified	_YSSSPCLYMF_					0	0	0			REV__ENSG00000172772|ENST00000395079|OR10W1	REV__ENSG00000172772|ENST00000395079|OR10W1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	599.251385	1196.48822	2.9174	0.0017482	3.4797	0.0020852	6.3971	0.0038335	599.2531736706703	74.626	0.31463	76.408	76.26	76.575	1.7817	0.0042144	0.00042859	NaN	19.257	20	9	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1353300	+		43659	11073	21428	21518							-0.10216675499964367
YSTDVSVDEVK	11	Unmodified	_YSTDVSVDEVK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	621.2989990115166	2	621.298433	1240.58231	1.3582	0.00084388	-0.38214	-0.00023743	0.9761	0.00060645	621.2982789260636	24.818	0.39689	24.818	24.613	25.01	0					36	12	4	0	0	0	0.026368	2	10370	10321;10370		92.201	52.251	1	5836700			43660	3217	21429	21519	50498;50499	50499					-0.02835541872491376
YSTDVSVDEVK	11	Unmodified	_YSTDVSVDEVK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	621.2994872927666	2	621.298433	1240.58231	0.73591	0.00045722	0.9457	0.00058756	1.6816	0.0010448	621.2989336121018	24.668	0.30414	24.91	24.774	25.078	0.24251					24	9	3	0	0	0	0.050041	2	10289	10289;10343		66.683	37.601	1	2291700			43661	3217	21429	21519	50500;50501	50500					-0.02835541872491376
YSTDVSVDEVK	11	Unmodified	_YSTDVSVDEVK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	621.2992431521416	2	621.298433	1240.58231	1.0008	0.0006218	-0.72567	-0.00045086	0.27514	0.00017095	621.2982048167543	23.579	0.27423	24.793	24.627	24.901	1.2145					17	8	3	0	0	0	0.16041	1	9852	9852		44.945	27.832	1	1469100			43662	3217	21429	21519	50502	50502					-0.02835541872491376
YSTDVSVDEVK	11	Unmodified	_YSTDVSVDEVK_					0	0	0		ENSG00000148672|ENST00000277865|GLUD1;ENSG00000182890|ENST00000328078|GLUD2;nc|ENSG00000148672|P00367-3|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	ENSG00000148672|ENST00000277865|GLUD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2998535037041	2	621.298433	1240.58231	0.13211	8.2081E-05	1.9841	0.0012327	2.1162	0.0013148	621.2991585698818	23.225	0.24355	24.877	24.716	24.96	1.6511					15	7	3	0	0	0	0.050041	1	9683	9683		66.683	37.601	1	1019600			43663	3217	21429	21519	50503	50503					-0.02835541872491376
YSTRVFMSV	9	Unmodified	_YSTRVFMSV_					0	0	0		ENST00000581398.1_1_4:1245404-1245611:+|nuORF;ENST00000578730.1_1_4:1245335-1281818:+|nuORF	ENST00000581398.1_1_4:1245404-1245611:+|nuORF	ENST00000581398.1_1_4:1245404-1245611:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	545.2745239138603	2	545.273509	1088.53247	1.8705	0.0010199	-1.0994	-0.00059948	0.77107	0.00042045	545.2733501430002	41.995	0.52647	43.335	43.141	43.667	1.3399					30	16	3	0	0	0	0.49082	1	17593	17593		15.847	0	1	559620			43664	7423	21430	21520	50504	50504					-0.008259032914565978
YSVIKTLPK	9	Unmodified	_YSVIKTLPK_					0	0	0			REV__nc|ENSG00000119715|O95718|ESRRB	REV__nc|ENSG00000119715|O95718|ESRRB	MSMS	GG20161007_CRH_Patient100_A02_02	2	350.2196533083916	3	350.21822	1047.63283	NaN	NaN	NaN	NaN	NaN	NaN	NaN	62.03	1	62.36	61.86	62.86	0.32974								0	0	0	0.42693	1	25989	25989		1.0715	0	1		+		43665	9552	21431	21521	50505	50505					0.11092077033845271
YSVRELAK	8	Unmodified	_YSVRELAK_					0	0	0			REV__ENSG00000071537|ENST00000336735|SEL1L	REV__ENSG00000071537|ENST00000336735|SEL1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	483.2754699587822	2	483.274367	964.53418	0.67753	0.00032743	0.62499	0.00030204	1.3025	0.00062947	483.27477401112355	13.872	0.27737	13.872	13.762	14.039	0					14	8	2	0	0	0	0.58448	1	5746	5746		41.84	10.571	1	1711400	+		43666	8725	21432	21522	50506	50506					0.05049473788801606
YSWWQLLIAK	10	Unmodified	_YSWWQLLIAK_					0	0	0		ENST00000407916.2_1_7:55003624-55004065:+|nuORF	ENST00000407916.2_1_7:55003624-55004065:+|nuORF	ENST00000407916.2_1_7:55003624-55004065:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	655.0383178591728	2	654.360973	1306.70739	2.4483	0.0016021	1.208	0.00079047	3.6563	0.0023926	654.3611957371809	62.166	0.46939	62.166	61.899	62.368	0					42	14	4	0	0	0	0.125	1	25837	25837		10.074	0.6908	1	3089500			43667	6372	21433	21523	50507	50507					0.06630839845229275
YSWWQLLIAK	10	Unmodified	_YSWWQLLIAK_					0	0	0		ENST00000407916.2_1_7:55003624-55004065:+|nuORF	ENST00000407916.2_1_7:55003624-55004065:+|nuORF	ENST00000407916.2_1_7:55003624-55004065:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	654.7858764529228	2	654.360973	1306.70739	1.943	0.0012714	0.91649	0.00059972	2.8595	0.0018711	654.3611802370401	61.5	0.6194	61.83	61.453	62.073	0.32974					49	19	3	0	0	0	0.12529	1	25626	25626		6.2058	0.9089	1	2528600			43668	6372	21433	21523	50508	50508					0.06630839845229275
YSYNYYFW	8	Unmodified	_YSYNYYFW_					0	0	0		ENST00000483012.1_1_7:148516133-148534012:-|nuORF	ENST00000483012.1_1_7:148516133-148534012:-|nuORF	ENST00000483012.1_1_7:148516133-148534012:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	402.1806213259697	3	402.502797	1204.48656	1.4144	0.00056932	2.5439	0.0010239	3.9583	0.0015932	402.83817966143687	67.184	0.29742	68.573	68.438	68.735	1.3888					17	9	2	0	0	0	2.3239	1	28251	28251		0.45834	0	1	2315300			43669	6838	21434	21524	50509	50509					-0.1075022520208222
YSYPELVKM	9	Unmodified	_YSYPELVKM_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.2856323122978	2	565.283543	1128.55253	1.9213	0.0010861	0.52799	0.00029847	2.4493	0.0013845	565.2838666457583	48.155	0.90874	49.543	48.895	49.804	1.388					63	28	3	0	0	0	0.10478	3	20160	20087;20160;20204		51.63	34.688	1	1911100			43670	4232	21435	21525	50510;50511;50512	50511					-0.0066015235152008245
YSYPELVKM	9	Unmodified	_YSYPELVKM_					0	0	0		ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	ENSG00000172244|ENST00000306862|C5orf34	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.2848388552666	2	565.283543	1128.55253	2.5519	0.0014426	-0.383	-0.0002165	2.1689	0.0012261	565.2832847667167	47.707	0.74138	49.683	49.156	49.898	1.976					57	23	3	0	0	0	0.10478	3	19966	19880;19966;20017		51.63	32.91	1	1613500			43671	4232	21435	21525	50513;50514;50515	50514					-0.0066015235152008245
YSYYNQGIL	9	Unmodified	_YSYYNQGIL_					0	0	0		ENSG00000175322|ENST00000590202|ZNF519	ENSG00000175322|ENST00000590202|ZNF519	ENSG00000175322|ENST00000590202|ZNF519	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	560.7724487185478	2	560.769114	1119.52368	2.9931	0.0016784	2.2645	0.0012699	5.2576	0.0029483	560.7707978531251	62.848	0.55566	64.261	64.103	64.659	1.4134					40	17	3	0	0	0	0.54523	2	26410	26410;26464		13.508	3.3245	1	2278900			43672	4370	21436	21526	50516;50517	50516					-0.0313055365627406
YTDELVEL	8	Unmodified	_YTDELVEL_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	981.4772216677666	1	981.477519	980.470243	0.9201	0.00090305	-0.5887	-0.0005778	0.3314	0.00032526	981.4766646156252	56.259	0.43764	57.669	57.435	57.872	1.4099					37	16	3	0	0	0	0.053466	3	23558	23514;23558;23608		106.85	12.962	1	20435000			43673	2432	21437	21527	50518;50519;50520	50519					-0.020773511587890425
YTDELVEL	8	Unmodified	_YTDELVEL_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	491.2426940798759	2	491.242398	980.470243	0.32538	0.00015984	-0.61593	-0.00030257	-0.29054	-0.00014273	491.2420307098183	56.209	0.3673	57.619	57.505	57.872	1.4099					23	12	3	0	0	0	0.15094	2	23594	23542;23594		86.121	11.725	1	7638600			43674	2432	21437	21527	50521;50522	50522					-0.020773511587890425
YTDELVEL	8	Unmodified	_YTDELVEL_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	981.4813720583916	1	981.477519	980.470243	0.87611	0.00085988	0.041168	4.0405E-05	0.91728	0.00090029	981.4777929393132	55.711	0.39027	57.679	57.543	57.933	1.9684					35	14	3	0	0	0	0.053466	3	23373	23329;23373;23416		106.85	12.962	1	16958000			43675	2432	21437	21527	50523;50524;50525	50524					-0.020773511587890425
YTDELVEL	8	Unmodified	_YTDELVEL_					0	0	0		ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	ENSG00000130382|ENST00000252674|MLLT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	491.2415649294853	2	491.242398	980.470243	0.8484	0.00041677	-0.78697	-0.00038659	0.061429	3.0177E-05	491.24194182299345	55.733	0.32765	57.701	57.543	57.871	1.9684					28	12	3	0	0	0	0.27086	2	23341	23341;23388		74.396	0	1	8559400			43676	2432	21437	21527	50526;50527	50526					-0.020773511587890425
YTDLSKQIF	9	Unmodified	_YTDLSKQIF_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7919799685478	2	557.792589	1113.57063	1.9052	0.0010627	-0.70586	-0.00039373	1.1994	0.000669	557.7925889485159	56.903	0.4586	58.318	58.093	58.551	1.4145					25	14	3	0	0	0	0.073578	1	23845	23845		58.679	3.9053	1	11521000	+		43677	9276	21438	21528	50528	50528					0.018383058948302278
YTDLSKQIF	9	Unmodified	_YTDLSKQIF_					0	0	0			REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	REV__nc|ENSG00000109667|Q9NRM0-2|SLC2A9	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	557.792589	1113.57063	1.9052	0.0010627	-0.70586	-0.00039373	1.1994	0.000669	557.7925889485159	56.903	0.4586	58.318	58.093	58.551	1.4145	0.011332	-0.00351	NaN	58.679	25	14	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	11521000	+		43678	9276	21438	21528							0.018383058948302278
YTDRVFTFI	9	Unmodified	_YTDRVFTFI_					0	0	0		ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	ENSG00000185313|ENST00000449082|SCN10A	MSMS	GG20161007_CRH_Patient100_W632_01	3	581.2989990115166	2	581.300581	1160.58661	NaN	NaN	NaN	NaN	NaN	NaN	NaN	84.759	1	85.918	85.418	86.418	1.159								0	0	0	0.42693	1	35565	35565		4.756	0	1				43679	4740	21439	21529	50529	50529					0.012740121317619924
YTDYSEIL	8	Unmodified	_YTDYSEIL_					0	0	0		tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	tr|A0A7D6VN81|A0A7D6VN81_9CLOTV-typeATPsynthasesubunitCOS=ClostridiumintestinaleOX=36845GN=HZF06_16685PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	502.2327758669853	2	502.234573	1002.45459	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.276	1	57.685	57.185	58.185	1.4099								0	0	0	1.0178	1	23584	23584		30.225	8.4782	1				43680	16725	21440	21530	50530	50530					-0.046536376758581355
YTEAVSDTQI	10	Unmodified	_YTEAVSDTQI_					0	0	0		ENSG00000064309|ENST00000531738|CDON;nc|ENSG00000064309|Q4KMG0|CDON	ENSG00000064309|ENST00000531738|CDON	ENSG00000064309|ENST00000531738|CDON	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	563.7653686404228	2	563.766768	1125.51898	2.7668	0.0015598	-3.9696	-0.0022379	-1.2028	-0.00067809	563.7643535908935	76.313	0.40913	78.08	77.813	78.222	1.7672					27	12	3	0	0	0	0.70618	1	32011	32011		18.146	5.6148	1	2040700			43681	769	21441	21531	50531	50531					-0.038754825897058254
YTEAVSDTQI	10	Unmodified	_YTEAVSDTQI_					0	0	0		ENSG00000064309|ENST00000531738|CDON;nc|ENSG00000064309|Q4KMG0|CDON	ENSG00000064309|ENST00000531738|CDON	ENSG00000064309|ENST00000531738|CDON	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	563.766768	1125.51898	2.6394	0.001488	-3.7272	-0.0021013	-1.0878	-0.00061327	563.7643834723469	76.805	0.40628	78.099	77.887	78.294	1.2938	0.0095585	0.00011327	NaN	18.146	31	12	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2282700			43682	769	21441	21531							-0.038754825897058254
YTELSENKPP	10	Unmodified	_YTELSENKPP_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.2885619997978	2	589.290411	1176.56627	1.4476	0.00085306	-3.8803	-0.0022866	-2.4327	-0.0014336	589.7899849764032	45.645	0.19222	47.615	47.471	47.663	1.9703					9	5	2	0	0	0	0.846	1	19121	19121		7.2892	0.56607	1	382050	+		43683	10194	21442	21532	50532	50532					-0.01495203318700078
YTELSENKPP	10	Unmodified	_YTELSENKPP_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	589.290411	1176.56627	1.6306	0.00096087	-9.8298	-0.0057926	-8.1992	-0.0048317	589.2823171156447	46.129	0.1897	47.504	47.365	47.555	1.3751	-0.055809	-0.0060397	NaN	7.2892	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	581980	+		43684	10194	21442	21532							-0.01495203318700078
YTELSENKPP	10	Unmodified	_YTELSENKPP_					0	0	0			REV__nc|ENSG00000143153|P05026-2|ATP1B1	REV__nc|ENSG00000143153|P05026-2|ATP1B1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	589.290411	1176.56627	1.4476	0.00085306	-3.8803	-0.0022866	-2.4327	-0.0014336	589.7899849764032	45.645	0.19222	47.615	47.471	47.663	1.9703	0.055809	0.00097218	NaN	7.2892	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	382050	+		43685	10194	21442	21532							-0.01495203318700078
YTFCWRVF	8	Unmodified	_YTFCWRVF_					0	0	0		nc|ENSG00000188869|Q7Z5M5-2|TMC3;ENST00000559982.1_1_15:81630174-81666445:-|nuORF;ENSG00000188869|ENST00000359440|TMC3	nc|ENSG00000188869|Q7Z5M5-2|TMC3	nc|ENSG00000188869|Q7Z5M5-2|TMC3	MSMS	GG20161007_CRH_Patient100_W632_02	4	561.2658569216728	2	561.265487	1120.51642	NaN	NaN	NaN	NaN	NaN	NaN	NaN	44.69	1	46.649	46.149	47.149	1.9596								0	0	0	1.0178	1	18730	18730		2.5775	0	1				43686	4881	21443	21533	50533	50533					-0.03901564737702756
YTFDPVTKV	9	Unmodified	_YTFDPVTKV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	535.2828857302666	2	535.281857	1068.54916	1.7058	0.0009131	0.87648	0.00046916	2.5823	0.0013823	535.2821423637292	41.992	0.3761	41.992	41.789	42.165	0					25	11	3	0	0	0	0.11951	1	17560	17560		53.404	29.383	1	4210600			43687	4724	21444	21534	50534	50534					0.017629208661446683
YTFDPVTKV	9	Unmodified	_YTFDPVTKV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	535.2827636599541	2	535.281857	1068.54916	1.8241	0.00097639	0.55432	0.00029672	2.3784	0.0012731	535.2819782719924	41.549	0.36716	41.866	41.67	42.037	0.31683					26	11	3	0	0	0	0.11951	1	17446	17446		53.404	22.767	1	2735700			43688	4724	21444	21534	50535	50535					0.017629208661446683
YTFDPVTKV	9	Unmodified	_YTFDPVTKV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	535.2830688357353	2	535.281857	1068.54916	2.4307	0.0013011	-0.16475	-8.8186E-05	2.2659	0.0012129	535.2817341892786	39.912	0.33775	41.222	41.023	41.361	1.3102					31	10	4	0	0	0	0.031067	2	16758	16711;16758		103.42	65.445	1	8382100			43689	4724	21444	21534	50536;50537	50537					0.017629208661446683
YTFDPVTKV	9	Unmodified	_YTFDPVTKV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	535.2830688357353	2	535.281857	1068.54916	1.8339	0.00098167	0.24923	0.00013341	2.0832	0.0011151	535.2819589703972	39.502	0.3666	41.365	41.155	41.521	1.8624					35	11	4	0	0	0	0.046032	2	16574	16521;16574		86.332	56.107	1	7129500			43690	4724	21444	21534	50538;50539	50539					0.017629208661446683
YTFDPVTKV	9	Unmodified	_YTFDPVTKV_					0	0	0		ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	ENSG00000185009|ENST00000355264|AP3M1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	535.281857	1068.54916	2.3059	0.0012343	4.7542	0.0025449	7.0601	0.0037791	535.2835190978434	40.445	0.2199	42.308	42.233	42.453	1.8624	0.25254	0.004139	NaN	53.404	12	6	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	702660			43691	4724	21444	21534							0.017629208661446683
YTFGRIVIY	9	Unmodified	_YTFGRIVIY_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11;nc|ENSG00000100109|Q9UBB9-2|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.3149291872978	2	566.313492	1130.61243	3.2863	0.0018611	0.042998	2.435E-05	3.3293	0.0018854	566.3135182900361	60.684	0.40776	62.104	61.841	62.249	1.4196					34	12	3	0	0	0	0.060242	3	25430	25385;25430;25468		63.961	33.324	1	18278000			43692	1243	21445	21535	50540;50541;50542	50541					0.05234906374039383
YTFGRIVIY	9	Unmodified	_YTFGRIVIY_					0	0	0		ENSG00000100109|ENST00000407690|TFIP11;nc|ENSG00000100109|Q9UBB9-2|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	ENSG00000100109|ENST00000407690|TFIP11	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.3154174685478	2	566.313492	1130.61243	3.1664	0.0017932	0.53342	0.00030208	3.6998	0.0020953	566.3138044613322	60.122	0.40676	62.087	61.854	62.26	1.9653					30	12	3	0	0	0	0.075994	3	25189	25189;25231;25271		57.722	35.975	1	17646000			43693	1243	21445	21535	50543;50544;50545	50543					0.05234906374039383
YTIPPWYEV	9	Unmodified	_YTIPPWYEV_					0	0	0			REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|206|1|anti-sense	REV__L1PA13_dup1157|chr3:174452329-174457545:+|1.616039578954474|0.1858096627507961|3.12|429.0|206|1|anti-sense	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	584.8417236208916	2	584.289682	1166.56481	2.5732	0.0015035	-2.1738	-0.0012701	0.39945	0.00023339	584.287787395733	47.383	0.40062	49.359	49.125	49.526	1.976					32	12	4	0	0	0	0.11684	1	19754	19754		7.9102	2.1497	1	3267000	+		43694	14295	21446	21536	50546	50546					-0.011807926168330596
YTIQTLKDF	9	Unmodified	_YTIQTLKDF_					0	0	0		nc|ENSG00000049283|Q9H201-2|EPN3;ENST00000512291.5_1_17:48613811-48618261:+|nuORF;ENSG00000049283|ENST00000268933|EPN3;ENST00000512379.5_1_17:48610205-48619515:+|nuORF	nc|ENSG00000049283|Q9H201-2|EPN3	nc|ENSG00000049283|Q9H201-2|EPN3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.3290283083916	2	564.800414	1127.58628	2.9654	0.0016749	-0.082629	-4.6669E-05	2.8828	0.0016282	564.8008385852075	62.578	0.23701	63.992	63.838	64.075	1.4134					11	7	2	0	0	0	0.10591	1	26175	26175		18.135	0	1	1689100			43695	689	21447	21537	50547	50547					0.02758592411896643
YTKKIAPL	8	Unmodified	_YTKKIAPL_					0	0	0			REV__ERO1LB-HEATR1|1|fusion	REV__ERO1LB-HEATR1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	467.2921935915947	2	467.292028	932.569503	1.6078	0.00075129	-2.3899	-0.0011168	-0.78217	-0.0003655	467.29079620924205	107.78	0.17513	107.78	107.67	107.84	0					26	9	4	0	0	0	0.89051	1	46257	46257		2.3027	0	1	81499000	+		43696	14156	21448	21538	50548	50548					0.10052136316596716
YTKKIAPL	8	Unmodified	_YTKKIAPL_					0	0	0			REV__ERO1LB-HEATR1|1|fusion	REV__ERO1LB-HEATR1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	467.292028	932.569503	1.6078	0.00075129	-2.3899	-0.0011168	-0.78217	-0.0003655	467.29079620924205	107.78	0.17513	107.78	107.67	107.84	0	-0.03024	0.0013325	NaN	2.3027	26	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	81499000	+		43697	14156	21448	21538							0.10052136316596716
YTKKIAPL	8	Unmodified	_YTKKIAPL_					0	0	0			REV__ERO1LB-HEATR1|1|fusion	REV__ERO1LB-HEATR1|1|fusion	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	467.292028	932.569503	3.4505	0.0016124	-3.8024	-0.0017768	-0.35194	-0.00016446	467.290278026909	107.73	0.1812	107.78	107.68	107.86	0.052452	-0.031916	1.2423E-05	NaN	2.3027	24	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	54508000	+		43698	14156	21448	21538							0.10052136316596716
YTLAINELL	9	Unmodified	_YTLAINELL_					0	0	0			REV__tr|A0A7D6ZVN7|A0A7D6ZVN7_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15650PE=3SV=1	REV__tr|A0A7D6ZVN7|A0A7D6ZVN7_9CLOTDMTfamilytransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_15650PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1049.598315417767	1	1049.58774	1048.58046	1.8812	0.0019745	-0.87149	-0.00091471	1.0098	0.0010598	1049.5866479520234	76.377	0.30116	76.377	76.196	76.497	0					17	9	2	0	0	0	0.34572	1	31837	31837		23.148	0	1	1543400	+		43699	15734	21449	21539	50549	50549					0.058114939002507526
YTLEKMFRV	9	Unmodified	_YTLEKMFRV_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	395.7546264529228	3	396.214482	1185.62162	0.31363	0.00012427	3.4403	0.0013631	3.754	0.0014874	396.21590965941374	47.017	0.31812	47.017	46.863	47.181	0					13	9	2	0	0	0	0.11444	1	19678	19678		7.9454	5.4469	1	730500			43700	823	21450	21540	50550	50550					0.03622931668064666
YTLEKMFRV	9	Unmodified	_YTLEKMFRV_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	396.2155944705009	3	396.214482	1185.62162	2.128	0.00084313	-0.15755	-6.2422E-05	1.9704	0.0007807	396.2146499997561	44.938	0.40856	46.303	46.056	46.464	1.3653					35	12	4	0	0	0	0.12108	2	18819	18819;18856		42.312	22.74	1	4603900			43701	823	21450	21540	50551;50552	50551					0.03622931668064666
YTLEKMFRV	9	Unmodified	_YTLEKMFRV_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	396.2154724001884	3	396.214482	1185.62162	2.0776	0.00082318	-0.26737	-0.00010594	1.8102	0.00071724	396.2146490386165	44.279	0.47505	46.223	45.989	46.464	1.9438					34	14	3	0	0	0	0.17733	2	18542	18542;18594		35.612	18.564	1	4347600			43702	823	21450	21540	50553;50554	50553					0.03622931668064666
YTLEKMFRV	9	Unmodified	_YTLEKMFRV_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	593.8224975466728	2	593.818084	1185.62162	2.3185	0.0013768	2.3123	0.0013731	4.6309	0.0027499	593.8200950484224	44.249	0.28207	46.193	46.084	46.366	1.9438					18	8	3	0	0	0	0.20145	1	18559	18559		41.956	15.072	1	1204000			43703	823	21450	21540	50555	50555					0.03622931668064666
YTLEKMFRV	9	Unmodified	_YTLEKMFRV_					0	0	0		nc|ENSG00000067445|Q12816-2|TRO;ENSG00000067445|ENST00000173898|TRO;ENST00000492706.5_1_X:54951111-54953173:+|nuORF;nc|ENSG00000067445|Q12816-5|TRO;nc|ENSG00000067445|Q12816-3|TRO;nc|ENSG00000067445|Q12816-4|TRO	nc|ENSG00000067445|Q12816-2|TRO	nc|ENSG00000067445|Q12816-2|TRO	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	396.214482	1185.62162	1.813	0.00071832	0.9079	0.00035972	2.7209	0.001078	396.21523363728784	46.521	0.30923	46.851	46.682	46.991	0.32983	-0.082974	-0.0018795	NaN	7.9454	21	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	469840			43704	823	21450	21540							0.03622931668064666
YTLLKYVQ	8	Unmodified	_YTLLKYVQ_					0	0	0			REV__tr|A0A553SS14|A0A553SS14_NIACIDUF2975domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02080PE=4SV=1	REV__tr|A0A553SS14|A0A553SS14_NIACIDUF2975domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	514.2973510622978	2	514.294768	1026.57498	2.6765	0.0013765	0.25713	0.00013224	2.9336	0.0015087	514.2948027169294	47.491	0.41676	48.874	48.663	49.079	1.3825					26	12	3	0	0	0	0.79422	1	19928	19928		21.747	6.9084	1	3733000	+		43705	15187	21451	21541	50556	50556					0.06275815108415372
YTLLKYVQ	8	Unmodified	_YTLLKYVQ_					0	0	0			REV__tr|A0A553SS14|A0A553SS14_NIACIDUF2975domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02080PE=4SV=1	REV__tr|A0A553SS14|A0A553SS14_NIACIDUF2975domain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_02080PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	514.2950317263603	2	514.294768	1026.57498	2.5946	0.0013344	0.31157	0.00016024	2.9061	0.0014946	514.2948723952817	47	0.34897	48.976	48.808	49.156	1.976					24	10	3	0	0	0	0.79422	1	19656	19656		21.747	5.8995	1	3477300	+		43706	15187	21451	21541	50557	50557					0.06275815108415372
YTLLMTPLF	9	Oxidation (M)	_YTLLM(Oxidation (M))TPLF_		YTLLM(1)TPLF		YTLLM(42)TPLF	0	0	1		ENST00000499346.6_1_5:127418445-127418481:-|nuORF	ENST00000499346.6_1_5:127418445-127418481:-|nuORF	ENST00000499346.6_1_5:127418445-127418481:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	557.7994872927666	2	557.796286	1113.57802	1.013	0.00056505	0.097728	5.4512E-05	1.1107	0.00061956	557.798127313238	56.327	0.5488	58.295	58.026	58.575	1.9684					29	17	3	0	0	0	0.12174	1	23678	23678		42.095	9.9776	1	9597800			43707	6971	21452	21542	50558	50558		109			0.025773221709187055
YTLSKEFGL	9	Unmodified	_YTLSKEFGL_					0	0	0		ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	ENSG00000203857|ENST00000369413|HSD3B1	MSMS	GG20161007_CRH_Patient100_W632_02	4	529.2818481326103	2	529.281857	1056.54916	NaN	NaN	NaN	NaN	NaN	NaN	NaN	48.55	1	50.528	50.028	51.028	1.9772								0	0	0	0.26308	1	20336	20336		21.537	1.0834	1				43708	5116	21453	21543	50559	50559					0.02314920866160719
YTLYQIML	8	Unmodified	_YTLYQIML_					0	0	0		ENST00000396981.6_1_17:4175487-4175577:-|nuORF	ENST00000396981.6_1_17:4175487-4175577:-|nuORF	ENST00000396981.6_1_17:4175487-4175577:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	523.2798950076103	2	522.775354	1043.53615	3.062	0.0016007	-1.3113	-0.00068553	1.7507	0.00091522	523.2769654947356	60.053	0.43969	62.019	61.76	62.199	1.9661					19	13	2	0	0	0	0.87803	1	25173	25173		10.183	0.83596	1	1728000			43709	6303	21454	21544	50560	50560					0.01612766482412553
YTMHWVRQ	8	Unmodified	_YTMHWVRQ_					0	0	0		nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43	nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43	nc|ENSG00000232216|A0A0B4J1X8|IGHV3-43	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	374.1008178591728	3	374.183404	1119.52838	0.62781	0.00023492	4.2117	0.0015759	4.8395	0.0018109	374.18470618136325	23.374	0.27869	23.608	23.474	23.753	0.23306					14	8	2	0	0	0	2.3239	1	9720	9720		0.40072	0.40072	1	494510			43710	8004	21455	21545	50561	50561					-0.026599479945161875
YTNKYRDLTE	10	Unmodified	_YTNKYRDLTE_					0	0	0			REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8824645876884	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5876	1	7.6639	7.1639	8.1639	0.07632								0	0	0	0.66264	1	3139	3139		0	0	1		+		43711	14736	21456	21546	50562	50562					-0.01356727024403881
YTNKYRDLTE	10	Unmodified	_YTNKYRDLTE_					0	0	0			REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8821288943291	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.6902	1	7.7666	7.2666	8.2666	0.07632								0	0	0	0.66264	1	3181	3181		0	0	1		+		43712	14736	21456	21546	50563	50563					-0.01356727024403881
YTNKYRDLTE	10	Unmodified	_YTNKYRDLTE_					0	0	0			REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8823425173759	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.9216	1	7.9979	7.4979	8.4979	0.07632								0	0	0	0.66264	1	3278	3278		0	0	1		+		43713	14736	21456	21546	50564	50564					-0.01356727024403881
YTNKYRDLTE	10	Unmodified	_YTNKYRDLTE_					0	0	0			REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825256228447	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.0213	1	8.0976	7.5976	8.5976	0.07632								0	0	0	0.66264	1	3320	3320		0	0	1		+		43714	14736	21456	21546	50565	50565					-0.01356727024403881
YTNKYRDLTE	10	Unmodified	_YTNKYRDLTE_					0	0	0			REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	REV__tr|A0A553SG85|A0A553SG85_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8826171755791	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	9.6095	1	9.6875	9.1875	10.187	0.077971								0	0	0	0.66264	1	3982	3982		0	0	1		+		43715	14736	21456	21546	50566	50566					-0.01356727024403881
YTNNFGLPEL	10	Unmodified	_YTNNFGLPEL_					0	0	0			REV__tr|A0A7D6VSB6|A0A7D6VSB6_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_05720PE=3SV=1	REV__tr|A0A7D6VSB6|A0A7D6VSB6_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_05720PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.2888671755791	2	584.287671	1166.56079	2.0948	0.0012239	1.7864	0.0010438	3.8812	0.0022677	584.2877020539881	47.775	0.43487	49.157	49.017	49.452	1.3825					33	13	3	0	0	0	0.49886	1	20018	20018		27.629	4.8925	1	2734200	+		43716	15440	21457	21547	50567	50567					-0.015828821105287716
YTNNFGLPEL	10	Unmodified	_YTNNFGLPEL_					0	0	0			REV__tr|A0A7D6VSB6|A0A7D6VSB6_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_05720PE=3SV=1	REV__tr|A0A7D6VSB6|A0A7D6VSB6_9CLOTABCtransporterpermeasesubunitOS=ClostridiumintestinaleOX=36845GN=HZF06_05720PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.2885009646416	2	584.287671	1166.56079	2.5732	0.0015035	1.2687	0.00074127	3.8419	0.0022448	584.287787395733	47.383	0.40062	49.359	49.125	49.526	1.976					32	12	4	0	0	0	0.49886	1	19826	19826		27.629	3.6082	1	3267000	+		43717	15440	21457	21547	50568	50568					-0.015828821105287716
YTNQNTGLTV	10	Unmodified	_YTNQNTGLTV_					0	0	0		ENSG00000120539|ENST00000375940|MASTL;nc|ENSG00000120539|Q96GX5-3|MASTL;nc|ENSG00000120539|Q96GX5-2|MASTL	ENSG00000120539|ENST00000375940|MASTL	ENSG00000120539|ENST00000375940|MASTL	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2791015505791	2	555.774928	1109.5353	2.9031	0.0016135	-3.8012	-0.0021126	-0.89808	-0.00049913	556.2734561564203	63.032	0.49868	64.445	64.254	64.753	1.4134					45	15	4	0	0	0	0.81324	1	26542	26542		10.824	1.4765	1	2547000			43718	2108	21458	21548	50569	50569					-0.015083566329622045
YTPDWIFLL	9	Unmodified	_YTPDWIFLL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	584.3095580935478	2	584.307875	1166.6012	3.4922	0.0020405	-0.47975	-0.00028032	3.0125	0.0017602	584.3075542224526	98.57	0.084656	98.798	98.755	98.84	0.22776					6	2	3	0	0	0	0.046276	1	41508	41508		70.716	17.14	1	6088500			43719	851;2954	21459	21549	50570	50570					0.024560842798791782
YTPDWIFLL	9	Unmodified	_YTPDWIFLL_					0	0	0		nc|ENSG00000070371|P53675-2|CLTCL1;ENSG00000070371|ENST00000427926|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC;ENSG00000141367|ENST00000269122|CLTC;VMP1-CLTC|1|fusion	nc|ENSG00000070371|P53675-2|CLTCL1;nc|ENSG00000141367|Q00610-2|CLTC	nc|ENSG00000070371|P53675-2|CLTCL1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	584.307875	1166.6012	3.1981	0.0018687	3.445	0.002013	6.6431	0.0038816	584.3100228363128	98.522	0.089966	98.778	98.706	98.796	0.25636	-0.0099058	0.0039142	NaN	70.716	6	2	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4486400			43720	851;2954	21459	21549							0.024560842798791782
YTPNTYFL	8	Unmodified	_YTPNTYFL_					0	0	0			REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	509.7501403689384	2	509.74765	1017.48075	1.4086	0.00071802	0.76176	0.00038831	2.1703	0.0011063	509.74803455075966	58.475	0.47398	59.893	59.722	60.196	1.4181					19	14	2	0	0	0	0.7006	1	24524	24524		30.225	0	1	2325700	+		43721	15111	21460	21550	50571	50571					-0.027293237137200776
YTPNTYFL	8	Unmodified	_YTPNTYFL_					0	0	0			REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7478515505791	2	509.74765	1017.48075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.933	1	59.902	59.402	60.402	1.969								0	0	0	1.0178	1	24302	24302		30.225	0	1		+		43722	15111	21460	21550	50572	50572					-0.027293237137200776
YTPNTYFL	8	Unmodified	_YTPNTYFL_					0	0	0			REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	REV__tr|A0A553SPX0|A0A553SPX0_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_10710PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	509.7498351931572	2	509.74765	1017.48075	NaN	NaN	NaN	NaN	NaN	NaN	NaN	58.112	1	60.081	59.581	60.581	1.969								0	0	0	1.0178	1	24378	24378		38.151	0	1		+		43723	15111	21460	21550	50573	50573					-0.027293237137200776
YTRFASTVF	9	Unmodified	_YTRFASTVF_					0	0	0		tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	546.3173095583916	2	546.279649	1090.54475	2.2183	0.0012118	-0.12979	-7.09E-05	2.0885	0.0011409	546.7809696221835	45.215	0.22799	46.58	46.464	46.692	1.3653					9	6	2	0	0	0	0.11684	1	18915	18915		7.9102	2.6795	1	417730			43724	16708	21461	21551	50574	50574					0.003094564432331026
YTRFASTVF	9	Unmodified	_YTRFASTVF_					0	0	0		tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	tr|A0A553SUT5|A0A553SUT5_NIACI6-phospho-beta-glucosidaseOS=NialliacirculansOX=1397GN=CEQ21_06565PE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	546.279649	1090.54475	2.0263	0.0011069	-0.16294	-8.9009E-05	1.8633	0.0010179	546.2801062360694	44.649	0.19089	46.609	46.48	46.671	1.9596	0.014183	-3.0379E-05	NaN	7.9102	9	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	338690			43725	16708	21461	21551							0.003094564432331026
YTSGGGGGG	9	Unmodified	_YTSGGGGGG_					0	0	0			REV__CON__Q3TTY5	REV__CON__Q3TTY5	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	356.7117492556572	2	356.648468	711.282382	1.2502	0.00044588	0.51305	0.00018298	1.7632	0.00062885	356.64809054428747	49.846	0.18851	51.823	51.758	51.946	1.9772					6	5	2	0	0	0	0.11957	1	20889	20889		0	0	1	216920	+	+	43726	8392	21462	21552	50575	50575					-0.08480744572682397
YTSIIIIP	8	Unmodified	_YTSIIIIP_					0	0	0			REV__tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	REV__tr|A0A7D6W3B5|A0A7D6W3B5_9CLOTMBOATfamilyproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_09250PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	307.1887390017509	3	307.18815	918.54262	NaN	NaN	NaN	NaN	NaN	NaN	NaN	21.113	1	22.688	22.188	23.188	1.5748								0	0	0	1.0178	1	8795	8795		0.45834	0	1		+		43727	15612	21463	21553	50576	50576					0.08009027705429617
YTTAGQLWNI	10	Unmodified	_YTTAGQLWNI_					0	0	0		nc|ENSG00000164211|Q96DR4-2|STARD4;ENST00000511569.5_1_5:110836619-110848199:-|nuORF;ENSG00000164211|ENST00000296632|STARD4	nc|ENSG00000164211|Q96DR4-2|STARD4	nc|ENSG00000164211|Q96DR4-2|STARD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	583.7988159060478	2	583.795663	1165.57677	2.529	0.0014764	2.5469	0.0014869	5.076	0.0029633	583.7967938367337	76.676	0.46794	77.969	77.731	78.199	1.2938					33	14	3	0	0	0	0.75645	1	32146	32146		15.847	2.3393	1	3274400			43728	3762	21464	21554	50577	50577					0.0006082412637624657
YTTAGQLWNI	10	Unmodified	_YTTAGQLWNI_					0	0	0		nc|ENSG00000164211|Q96DR4-2|STARD4;ENST00000511569.5_1_5:110836619-110848199:-|nuORF;ENSG00000164211|ENST00000296632|STARD4	nc|ENSG00000164211|Q96DR4-2|STARD4	nc|ENSG00000164211|Q96DR4-2|STARD4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.7977172732353	2	583.795663	1165.57677	2.6943	0.0015729	2.1069	0.00123	4.8012	0.0028029	583.7968029250889	76.127	0.345	77.894	77.782	78.127	1.7672					27	10	4	0	0	0	0.75645	1	31935	31935		15.847	0	1	3554900			43729	3762	21464	21554	50578	50578					0.0006082412637624657
YTTDFIYQL	9	Unmodified	_YTTDFIYQL_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;PITRM1-PFKP|2|fusion;PITRM1-PFKP|1|fusion	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.2863036990166	2	582.284597	1162.55464	2.7825	0.0016202	1.0613	0.00061796	3.8438	0.0022382	582.285139652307	72.506	0.42391	73.836	73.58	74.004	1.3297					44	13	4	0	0	0	0.03795	3	30434	30387;30434;30477		77.984	49.497	1	9631100			43730	816	21465	21555	50579;50580;50581	50580					-0.02013400342048044
YTTDFIYQL	9	Unmodified	_YTTDFIYQL_					0	0	0		nc|ENSG00000067057|Q01813-2|PFKP;ENSG00000067057|ENST00000381125|PFKP;PITRM1-PFKP|2|fusion;PITRM1-PFKP|1|fusion	nc|ENSG00000067057|Q01813-2|PFKP	nc|ENSG00000067057|Q01813-2|PFKP	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2868530154228	2	582.284597	1162.55464	2.6278	0.0015301	0.54559	0.00031769	3.1734	0.0018478	582.2848110186542	72.065	0.67194	73.888	73.634	74.305	1.824					41	21	3	0	0	0	0.03795	2	30187	30187;30238		77.984	43.882	1	13028000			43731	816	21465	21555	50582;50583	50582					-0.02013400342048044
YTTDRVMTV	9	Unmodified	_YTTDRVMTV_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	543.2672607302666	2	543.268424	1084.5223	0.60533	0.00032886	-0.87648	-0.00047617	-0.27115	-0.00014731	543.2688327252152	24.206	0.18346	25.891	25.783	25.967	1.6845					9	5	2	0	0	0	0.57699	1	10134	10134		12.241	0	1	415110			43732	1970;4951	21466	21556	50584	50584					-0.016585110166943196
YTTDRVMTV	9	Unmodified	_YTTDRVMTV_					0	0	0		ENSG00000116478|ENST00000373548|HDAC1;ENST00000523334.1_1_6:114270238-114277280:-|nuORF;ENSG00000196591|ENST00000519065|HDAC2;nc|ENSG00000196591|Q92769-3|HDAC2	ENSG00000116478|ENST00000373548|HDAC1;ENSG00000196591|ENST00000519065|HDAC2	ENSG00000196591|ENST00000519065|HDAC2	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	543.268424	1084.5223	1.3649	0.00074151	0.44238	0.00024033	1.8073	0.00098184	543.269165927812	24.585	0.14983	25.826	25.732	25.882	1.241	-0.032458	0.00063256	NaN	12.241	7	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	456120			43733	1970;4951	21466	21556							-0.016585110166943196
YTTEMDLLI	9	Unmodified	_YTTEMDLLI_					0	0	0			REV__ENST00000578839.5_1_17:61562212-61574724:+|nuORF	REV__ENST00000578839.5_1_17:61562212-61574724:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	550.2178832888603	2	549.773008	1097.53146	1.2702	0.0006983	3.0024	0.0016506	4.2725	0.0023489	549.7744011023569	67.377	0.2715	69.247	69.059	69.331	1.87					13	8	2	0	0	0	0.11645	1	28217	28217		4.756	1.1595	1	1417100	+		43734	10579	21467	21557	50585	50585					-0.013401624510152033
YTTKQVITK	9	Unmodified	_YTTKQVITK_					0	0	0		ENST00000505323.1_1_5:108260361-108380497:+|nuORF;nc|ENSG00000151422|P16591-3|FER;nc|ENSG00000151422|P16591-2|FER;ENSG00000151422|ENST00000281092|FER	ENST00000505323.1_1_5:108260361-108380497:+|nuORF	ENST00000505323.1_1_5:108260361-108380497:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	1081.629565417767	1	1081.62519	1080.61791	3.5226	0.0038101	-0.13339	-0.00014428	3.3892	0.0036658	1081.6255161122917	107.58	0.15353	107.63	107.54	107.69	0.052452					18	7	4	0	0	0	0.85403	1	46058	46058		0	0	1	42757000			43735	3287	21468	21558	50586	50586					0.08082585165834644
YTTYDGSP	8	Unmodified	_YTTYDGSP_					0	0	0			REV__ENSG00000183579|ENST00000544604|ZNRF3	REV__ENSG00000183579|ENST00000544604|ZNRF3	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	903.0731689333916	1	903.373054	902.365778	3.871	0.0034969	1.2687	0.0011461	5.1396	0.004643	903.3766580194107	92.86	1.2362	93.731	93.245	94.481	0.87176					52	37	2	0	0	0	2.3239	1	39189	39189		5.2307	0	1	1894600	+		43736	11398	21469	21559	50587	50587					-0.08931052915511373
YTVIVVTSVV	10	Unmodified	_YTVIVVTSVV_					0	0	0		nc|ENSG00000115353|P25103-3|TACR1;ENSG00000115353|ENST00000305249|TACR1	nc|ENSG00000115353|P25103-3|TACR1	nc|ENSG00000115353|P25103-3|TACR1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	360.5748168826103	3	360.549747	1078.62741	0.4333	0.00015622	-0.40582	-0.00014632	0.027481	9.9082E-06	360.54962234495264	21.988	0.17501	22.211	22.084	22.259	0.223					8	5	2	0	0	0	0.12555	1	9111	9111		0.77653	0.54069	1	333930			43737	1913	21470	21560	50588	50588					0.09124353451397837
YTVNRYCII	9	Unmodified	_YTVNRYCII_					0	0	0		ENST00000479212.5_1_3:113627916-113664322:+|nuORF;nc|ENSG00000178075|Q8IYS0-2|GRAMD1C;ENSG00000178075|ENST00000358160|GRAMD1C	ENST00000479212.5_1_3:113627916-113664322:+|nuORF	ENST00000479212.5_1_3:113627916-113664322:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	572.7422363162041	2	572.794609	1143.57467	2.3496	0.0013458	0.80502	0.00046111	3.1546	0.0018069	572.795039956718	69.611	0.34274	70.977	70.817	71.159	1.3657					13	10	2	0	0	0	0.11463	1	29220	29220		12.532	0	1	859970			43738	4472	21471	21561	50589	50589					0.00862072116933632
YTVSIKSSKL	10	Unmodified	_YTVSIKSSKL_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1125.654467761517	1	1125.6514	1124.64412	2.7802	0.0031295	0.2736	0.00030797	3.0538	0.0034375	1125.6515185530566	107.51	0.15181	107.67	107.58	107.73	0.15781					23	7	5	0	0	0	0.89803	1	46262	46262		0	0	1	54885000			43739	4981	21472	21562	50590	50590					0.08678854337358644
YTVSIKSSKL	10	Unmodified	_YTVSIKSSKL_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		1	1125.6514	1124.64412	1.3526	0.0015226	0.78017	0.00087819	2.1328	0.0024008	1125.6522671516066	107.57	0.11407	107.57	107.49	107.6	0	-0.061765	0.00068142	NaN	0	7	5	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5235700			43740	4981	21472	21562							0.08678854337358644
YTVSIKSSKL	10	Unmodified	_YTVSIKSSKL_					0	0	0		nc|ENSG00000197121|Q75T13-2|PGAP1;ENSG00000197121|ENST00000354764|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	nc|ENSG00000197121|Q75T13-2|PGAP1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1125.6514	1124.64412	3.1475	0.003543	-1.0376	-0.001168	2.1099	0.002375	1125.6513223843097	107.51	0.15492	107.67	107.56	107.72	0.15796	0.030388	-0.0013648	NaN	0	22	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	21926000			43741	4981	21472	21562							0.08678854337358644
YTVSVTWASVT	11	Unmodified	_YTVSVTWASVT_					0	0	0		ENSG00000224535.2,LINC02771,chr1,-,I2.1,212467834,212467925|73|2.96|8|intron	ENSG00000224535.2,LINC02771,chr1,-,I2.1,212467834,212467925|73|2.96|8|intron	ENSG00000224535.2,LINC02771,chr1,-,I2.1,212467834,212467925|73|2.96|8|intron	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	607.2129394412041	2	607.308603	1212.60265	2.4155	0.001467	-2.5032	-0.0015202	-0.087734	-5.3281E-05	607.306913002792	59.993	0.23752	59.993	59.887	60.124	0					9	7	2	0	0	0	0.14606	1	25062	25062		1.0715	0	1	1034900			43742	5287	21473	21563	50591	50591					0.004856735780094823
YTWRWVWSWEW	11	Unmodified	_YTWRWVWSWEW_					0	0	0		ENST00000419548.4_1_20:3670209-3670299:-|nuORF	ENST00000419548.4_1_20:3670209-3670299:-|nuORF	ENST00000419548.4_1_20:3670209-3670299:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	562.2607299685478	3	562.261371	1683.76228	0.33222	0.00018679	-2.1239	-0.0011942	-1.7916	-0.0010074	562.2595350088404	16.002	0.14408	16.828	16.756	16.9	0.82643					10	7	2	0	0	0	1.0405	1	6666	6666		0	0	1	953380			43743	6438	21474	21564	50592	50592					-0.05224773354188983
YTYEDFKK	8	Unmodified	_YTYEDFKK_					0	0	0		nc|ENSG00000149177|Q12913-3|PTPRJ;ENSG00000149177|ENST00000418331|PTPRJ	nc|ENSG00000149177|Q12913-3|PTPRJ	nc|ENSG00000149177|Q12913-3|PTPRJ	MSMS	GG20161007_CRH_Patient100_A02_01	1	365.1786987185478	3	365.178202	1092.51278	NaN	NaN	NaN	NaN	NaN	NaN	NaN	19.15	1	19.15	18.65	19.65	0								0	0	0	1.0178	1	7957	7957		8.7454	2.5396	1				43744	3231	21475	21565	50593	50593					-0.029779560305769337
YTYLRINFY	9	Unmodified	_YTYLRINFY_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	626.8240234255791	2	626.821681	1251.62881	2.6672	0.0016719	0.80524	0.00050474	3.4724	0.0021766	626.8222714636227	61.64	0.72029	63.057	62.804	63.524	1.4177					59	22	4	0	0	0	0.0006934	3	25861	25814;25861;25912		134.3	98.169	1	9305700			43745	1163	21476	21566	50594;50595;50596	50595					0.013059875401495447
YTYLRINFY	9	Unmodified	_YTYLRINFY_					0	0	0		ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	ENSG00000092201|ENST00000216297|SUPT16H	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	626.8240234255791	2	626.821681	1251.62881	1.9026	0.0011926	1.3524	0.00084769	3.2549	0.0020403	626.8226647311749	61.114	0.59126	63.079	62.85	63.441	1.9653					46	18	4	0	0	0	2.4291E-05	3	25649	25600;25649;25700		168.66	118.73	1	8641700			43746	1163	21476	21566	50597;50598;50599	50598					0.013059875401495447
YVDAIPFCL	9	Unmodified	_YVDAIPFCL_					0	0	0		L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|244|1|anti-sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|244|1|anti-sense	L1PA6_dup3351|chr9:62822444-62828465:-|1.1030626431334083|0.4732955736906382|1.22|429.0|244|1|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1040.515551745892	1	1040.51213	1039.50485	4.4809	0.0046624	0.94284	0.00098104	5.4238	0.0056435	1040.5132085335947	89.796	0.68483	90.815	90.493	91.178	1.0199					35	21	2	0	0	0	0.09539	3	37772	37772;37820;37963		50.855	2.5092	1	4307000			43747	7758	21477	21567	50600;50601;50602	50600					-0.013318065517069044
YVDDGLISL	9	Unmodified	_YVDDGLISL_					0	0	0		chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;nc|ENSG00000067225|P14618-3|PKM;nc|ENSG00000067225|P14618-2|PKM;ENSG00000067225|ENST00000335181|PKM	chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1	chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	994.5130493044853	1	994.509154	993.501877	2.3089	0.0022962	0.63875	0.00063524	2.9476	0.0029314	994.5099836300791	64.983	0.34244	66.891	66.72	67.063	1.9085					21	10	3	0	0	0	0.042029	1	27252	27252		74.423	19.649	1	1486200			43748	208	21478	21568	50603	50603					0.004866415951596537
YVDDGLISL	9	Unmodified	_YVDDGLISL_					0	0	0		chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1;ENST00000562784.1_1_15:72501984-72509791:-|nuORF;nc|ENSG00000067225|P14618-3|PKM;nc|ENSG00000067225|P14618-2|PKM;ENSG00000067225|ENST00000335181|PKM	chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1	chr15:72200655-72209686|149|319.42|0.16|11.0|-|0|PKM,None|1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	994.509154	993.501877	4.0242	0.0040021	-0.8742	-0.0008694	3.15	0.0031327	994.5080897900589	65.446	0.34099	66.845	66.632	66.973	1.3989	-0.023057	-0.0007834	NaN	74.423	22	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1618800			43749	208	21478	21568							0.004866415951596537
YVDDIFLRV	9	Unmodified	_YVDDIFLRV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1;ENST00000494467.1_1_9:107587931-107593243:-|nuORF	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	570.3101684451103	2	570.308406	1138.60226	2.9196	0.0016651	0.1931	0.00011013	3.1127	0.0017752	570.3085362468981	64.251	0.46391	65.658	65.401	65.865	1.4071					41	14	4	0	0	0	0.04812	2	26951	26905;26951		69.105	36.799	1	5635300			43750	3812	21479	21569	50604;50605	50605					0.03850298648762873
YVDDIFLRV	9	Unmodified	_YVDDIFLRV_					0	0	0		ENSG00000165029|ENST00000374736|ABCA1;ENST00000494467.1_1_9:107587931-107593243:-|nuORF	ENSG00000165029|ENST00000374736|ABCA1	ENSG00000165029|ENST00000374736|ABCA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	570.3099243044853	2	570.308406	1138.60226	2.8734	0.0016387	0.52488	0.00029934	3.3983	0.0019381	570.30830799653	63.68	0.46634	65.609	65.36	65.827	1.928					43	14	4	0	0	0	0.04812	2	26740	26690;26740		69.105	29.148	1	4316300			43751	3812	21479	21569	50606;50607	50607					0.03850298648762873
YVDISLNIVI	10	Unmodified	_YVDISLNIVI_					0	0	0			REV__tr|A0A7D7AB82|A0A7D7AB82_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_14330PE=3SV=1	REV__tr|A0A7D7AB82|A0A7D7AB82_9CLOTSigma-70familyRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=HZF06_14330PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.8298828005791	2	574.831714	1147.64888	1.0268	0.00059021	2.8066	0.0016133	3.8334	0.0022035	574.833359032258	53.673	0.40134	55.642	55.414	55.815	1.9697					28	12	3	0	0	0	0.63205	1	22455	22455		21.537	2.175	1	6732600	+		43752	15896	21480	21570	50608	50608					0.08095738480074033
YVDPVITSI	9	Unmodified	_YVDPVITSI_					0	0	0		nc|ENSG00000105976|P08581-2|MET;ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-3|MET	nc|ENSG00000105976|P08581-2|MET	nc|ENSG00000105976|P08581-2|MET	MSMS	GG20161007_CRH_Patient100_A02_01	1	503.7788574099541	2	503.776408	1005.53826	NaN	NaN	NaN	NaN	NaN	NaN	NaN	61.049	1	61.049	60.549	61.549	0								0	0	0	0.36184	1	25456	25456		12.532	3.9383	1				43753	1551	21481	21571	50609	50609					0.03571518491855841
YVDPVITSI	9	Unmodified	_YVDPVITSI_					0	0	0		nc|ENSG00000105976|P08581-2|MET;ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-3|MET	nc|ENSG00000105976|P08581-2|MET	nc|ENSG00000105976|P08581-2|MET	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1006.55040282011	1	1006.54554	1005.53826	2.6601	0.0026776	0.98083	0.00098725	3.641	0.0036648	1006.5478138535052	59.334	0.24691	60.753	60.648	60.895	1.4196					13	7	2	0	0	0	0.11643	1	24890	24890		43.858	7.8141	1	1237600			43754	1551	21481	21571	50610	50610					0.03571518491855841
YVDPVITSI	9	Unmodified	_YVDPVITSI_					0	0	0		nc|ENSG00000105976|P08581-2|MET;ENSG00000105976|ENST00000397752|MET;nc|ENSG00000105976|P08581-3|MET	nc|ENSG00000105976|P08581-2|MET	nc|ENSG00000105976|P08581-2|MET	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		1	1006.54554	1005.53826	2.5544	0.0025711	0.44039	0.00044327	2.9948	0.0030144	1006.546371803836	58.859	0.27682	60.828	60.694	60.971	1.969	0.037549	-0.00012402	NaN	43.858	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	959070			43755	1551	21481	21571							0.03571518491855841
YVFFYRDAI	9	Unmodified	_YVFFYRDAI_					0	0	0		tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	tr|A0A7D6VUY4|A0A7D6VUY4_9CLOTTransporterOS=ClostridiumintestinaleOX=36845GN=HZF06_22280PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	597.3023559451103	2	597.303124	1192.5917	NaN	NaN	NaN	NaN	NaN	NaN	NaN	50.285	1	52.262	51.762	52.762	1.9772								0	0	0	0.36184	1	21064	21064		12.532	1.7076	1				43756	16957	21482	21572	50611	50611					0.0031031599437483237
YVFPGVTRL	9	Unmodified	_YVFPGVTRL_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.3011962771416	2	526.300384	1050.58622	2.0246	0.0010656	-0.82116	-0.00043218	1.2035	0.00063339	526.299919380832	55.736	0.3267	55.736	55.553	55.88	0					26	11	3	0	0	0	0.11669	2	23231	23177;23231		43.772	18.373	1	3403900			43757	3553	21483	21573	50612;50613	50613					0.06294637202563536
YVFPGVTRL	9	Unmodified	_YVFPGVTRL_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	526.3012573122978	2	526.300384	1050.58622	2.2065	0.0011613	-0.95414	-0.00050217	1.2523	0.00065911	526.2999390088916	55.117	0.31578	55.438	55.295	55.61	0.32088					22	10	3	0	0	0	0.11669	2	23097	23053;23097		43.772	11.467	1	3378400			43758	3553	21483	21573	50614;50615	50615					0.06294637202563536
YVFPGVTRL	9	Unmodified	_YVFPGVTRL_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	526.3025390505791	2	526.300384	1050.58622	1.3494	0.00071018	2.6028	0.0013699	3.9522	0.00208	526.3026650519002	53.84	0.37571	55.241	55.058	55.434	1.4005					34	13	3	0	0	0	0.093059	1	22501	22501		51.63	9.8126	1	21353000			43759	3553	21483	21573	50616	50616					0.06294637202563536
YVFPGVTRL	9	Unmodified	_YVFPGVTRL_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	526.3023559451103	2	526.300384	1050.58622	0.69688	0.00036677	2.873	0.0015121	3.5699	0.0018788	526.3026267343173	53.33	0.36231	55.3	55.078	55.44	1.9697					33	13	3	0	0	0	0.093059	1	22300	22300		51.63	9.8126	1	20490000			43760	3553	21483	21573	50617	50617					0.06294637202563536
YVGDSDIYTV	10	Unmodified	_YVGDSDIYTV_					0	0	0		nc|ENSG00000069020|O15021-2|MAST4;nc|ENSG00000069020|O15021-3|MAST4;nc|ENSG00000069020|O15021-6|MAST4;ENSG00000069020|ENST00000403625|MAST4	nc|ENSG00000069020|O15021-2|MAST4	nc|ENSG00000069020|O15021-2|MAST4	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	377.8470641970634	3	377.845	1130.51317	2.4492	0.00092543	-1.1074	-0.00041841	1.3419	0.00050702	377.845892826815	74.505	0.32729	75.823	75.651	75.978	1.318					33	10	4	0	0	0	0.83036	1	31273	31273		8.9762	1.0661	1	1841500			43761	839	21484	21574	50618	50618					-0.04686581101373122
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	559.3256713747978	2	559.32386	1116.63317	2.0132	0.0011261	-2.0542	-0.0011489	-0.040916	-2.2885E-05	559.3231582243334	55.486	0.25229	55.807	55.643	55.895	0.32088					13	7	2	0	0	0	0.70643	1	23215	23215		18.135	5.8943	1	639070	+		43762	14644	21485	21575	50619	50619					0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	559.3248779177666	2	559.32386	1116.63317	1.7251	0.00096488	-1.3042	-0.00072948	0.42087	0.0002354	559.3234474275221	54.193	0.31218	55.598	55.459	55.771	1.4048					17	9	2	0	0	0	0.56346	1	22716	22716		24.674	5.3119	1	2320300	+		43763	14644	21485	21575	50620	50620					0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	559.3248168826103	2	559.32386	1116.63317	0.95311	0.0005331	-1.4507	-0.00081138	-0.49754	-0.00027829	559.3231768517393	53.673	0.28142	55.642	55.503	55.784	1.9697					18	8	3	0	0	0	0.56346	1	22468	22468		24.674	9.4254	1	2625100	+		43764	14644	21485	21575	50621	50621					0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_01	1		2	559.32386	1116.63317	1.375	0.00076905	-3.8778	-0.002169	-2.5029	-0.0013999	559.3221308508325	56.012	0.2047	56.012	55.908	56.113	0	0.24756	-0.0021963	NaN	24.674	8	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	945760	+		43765	14644	21485	21575							0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	559.32386	1116.63317	2.0132	0.0011261	-2.0542	-0.0011489	-0.040916	-2.2885E-05	559.3231582243334	55.486	0.25229	55.807	55.643	55.895	0.32088	0.042405	-0.00015623	NaN	24.674	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	639070	+		43766	14644	21485	21575							0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	559.32386	1116.63317	1.7251	0.00096488	-1.3042	-0.00072948	0.42087	0.0002354	559.3234474275221	54.193	0.31218	55.598	55.459	55.771	1.4048	-0.16735	0.00068268	NaN	24.674	17	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2320300	+		43767	14644	21485	21575							0.07951496753685205
YVHLGAFLVV	10	Unmodified	_YVHLGAFLVV_					0	0	0			REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	REV__sp|F5HE74|U148A_HCMVMProteinUL148AOS=Humancytomegalovirus(strainMerlin)OX=295027GN=UL148APE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	559.32386	1116.63317	0.95311	0.0005331	-1.4507	-0.00081138	-0.49754	-0.00027829	559.3231768517393	53.673	0.28142	55.642	55.503	55.784	1.9697	-0.12261	0.00051888	NaN	24.674	18	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2625100	+		43768	14644	21485	21575							0.07951496753685205
YVHPPPPGTP	10	Unmodified	_YVHPPPPGTP_					0	0	0		ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	ENST00000487852.1_1_13:33590814-33628082:+|nuORF	MSMS	GG20161007_CRH_Patient100_A02_01	1	531.2745239138603	2	531.274367	1060.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.82	1	104.82	104.32	105.32	0								0	0	0	0.66031	1	44335	44335		3.9444	0	1				43769	6882	21486	21576	50622	50622					0.0063347378879825555
YVIELQHVV	9	Unmodified	_YVIELQHVV_					0	0	0		nc|ENSG00000172053|P47897-2|QARS1;ENSG00000172053|ENST00000306125|QARS1;ENST00000494984.5_1_3:49135981-49136101:-|nuORF;ENST00000470113.2_1_3:49135784-49136686:-|nuORF	nc|ENSG00000172053|P47897-2|QARS1	nc|ENSG00000172053|P47897-2|QARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	550.8124877810478	2	550.310949	1098.60735	0.42135	0.00023187	-1.4407	-0.00079283	-1.0194	-0.00056096	550.3113681593018	51.121	0.33345	52.515	52.346	52.68	1.3938					24	10	3	0	0	0	0.079895	1	21399	21399		56.177	20.05	1	3584600			43770	4226	21487	21577	50623	50623					0.06198602511426543
YVIELQHVV	9	Unmodified	_YVIELQHVV_					0	0	0		nc|ENSG00000172053|P47897-2|QARS1;ENSG00000172053|ENST00000306125|QARS1;ENST00000494984.5_1_3:49135981-49136101:-|nuORF;ENST00000470113.2_1_3:49135784-49136686:-|nuORF	nc|ENSG00000172053|P47897-2|QARS1	nc|ENSG00000172053|P47897-2|QARS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	550.3118774294853	2	550.310949	1098.60735	0.655	0.00036045	-2.6961	-0.0014837	-2.0411	-0.0011232	550.3105333369979	50.523	0.27224	52.499	52.394	52.667	1.9753					21	8	3	0	0	0	0.073578	1	21174	21174		58.679	16.839	1	3445700			43771	4226	21487	21577	50624	50624					0.06198602511426543
YVIIKALVTI	10	Unmodified	_YVIIKALVTI_					0	0	0		nc|ENSG00000112038|P35372-15|OPRM1;nc|ENSG00000112038|P35372-12|OPRM1;nc|ENSG00000112038|P35372-14|OPRM1;nc|ENSG00000112038|P35372-13|OPRM1;nc|ENSG00000112038|P35372-11|OPRM1;nc|ENSG00000112038|P35372-2|OPRM1;nc|ENSG00000112038|P35372-8|OPRM1;ENSG00000112038|ENST00000330432|OPRM1;nc|ENSG00000112038|P35372-6|OPRM1;nc|ENSG00000112038|P35372-4|OPRM1;nc|ENSG00000112038|P35372-7|OPRM1;nc|ENSG00000112038|P35372-5|OPRM1;nc|ENSG00000112038|P35372-9|OPRM1;nc|ENSG00000112038|P35372-3|OPRM1;nc|ENSG00000112038|P35372-10|OPRM1	nc|ENSG00000112038|P35372-15|OPRM1	nc|ENSG00000112038|P35372-15|OPRM1	MSMS	GG20161007_CRH_Patient100_A02_02	2	378.2510253787041	3	378.249521	1131.72673	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.32	1	100.39	99.891	100.89	0.072716								0	0	0	0.66222	1	41999	41999		0.69767	0	1				43772	1765	21488	21578	50625	50625					0.16613796136152814
YVIKHLLTF	9	Unmodified	_YVIKHLLTF_					0	0	0		HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|13|2|sense	HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|13|2|sense	HERVK22-int_dup405|chr19:23557002-23557849:+|1.08382364310699|0.0263687417948669|5.36|399.0|13|2|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3392822146416	2	567.33951	1132.66447	2.9375	0.0016666	-1.8861	-0.0010701	1.0514	0.00059649	567.3380161006522	70.183	0.43966	71.537	71.272	71.712	1.3536					28	13	3	0	0	0	0.39927	1	29514	29514		20.454	4.6064	1	2933100			43773	7643	21489	21579	50626	50626					0.10344069787765875
YVIQKFFEF	9	Unmodified	_YVIQKFFEF_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000134644|Q14671-4|PUM1;PUM1-NKAIN1|5|fusion;PUM1-NKAIN1|4|fusion;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000134644|Q14671-4|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	610.8210937380791	2	610.82115	1219.62775	3.4123	0.0020843	-2.6096	-0.001594	0.8027	0.00049031	610.8190344583887	73.596	0.40928	74.914	74.685	75.094	1.318					29	12	3	0	0	0	0.037098	1	30872	30872		78.728	34.87	1	3067300			43774	724;2627	21490	21580	50627	50627					0.026717731712096793
YVIQKFFEF	9	Unmodified	_YVIQKFFEF_					0	0	0		nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000055917|Q8TB72-4|PUM2;ENSG00000055917|ENST00000361078|PUM2;nc|ENSG00000055917|Q8TB72|PUM2;nc|ENSG00000134644|Q14671-4|PUM1;PUM1-NKAIN1|5|fusion;PUM1-NKAIN1|4|fusion;nc|ENSG00000134644|Q14671-2|PUM1;nc|ENSG00000134644|Q14671|PUM1;ENSG00000134644|ENST00000426105|PUM1	nc|ENSG00000055917|Q8TB72-2|PUM2;nc|ENSG00000134644|Q14671-4|PUM1	nc|ENSG00000134644|Q14671-4|PUM1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	610.82115	1219.62775	2.5816	0.0015769	-1.7545	-0.0010717	0.82716	0.00050525	610.8193165259917	73.042	0.38154	74.852	74.671	75.053	1.8101	-0.031132	0.00059574	NaN	78.728	30	11	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3036900			43775	724;2627	21490	21580							0.026717731712096793
YVISSALLL	9	Unmodified	_YVISSALLL_					0	0	0			REV__ENST00000436441.5_3_9:135172278-135172338:-|nuORF	REV__ENST00000436441.5_3_9:135172278-135172338:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	978.5865966677666	1	978.58701	977.579734	3.2999	0.0032292	-3.8852	-0.003802	-0.58531	-0.00057278	978.5838728863686	80.968	0.3648	82.202	81.983	82.348	1.2332					21	11	3	0	0	0	0.061246	1	33977	33977		63.563	0	1	2315100	+		43776	13053	21491	21581	50628	50628					0.09004699251181592
YVKELKKKRKQ	11	Unmodified	_YVKELKKKRKQ_					0	0	0		ENST00000472688.5_1_1:84411941-84414357:-|nuORF;ENST00000488014.5_1_1:84403680-84417894:-|nuORF;TTLL7|p.L216Qfs*26|1|0.47|ENSG00000137941|chr1:83942539-83942539|A/-|frameshift_variant;nc|ENSG00000137941|Q6ZT98-2|TTLL7;nc|ENSG00000137941|Q6ZT98-3|TTLL7;ENSG00000137941|ENST00000260505|TTLL7	ENST00000472688.5_1_1:84411941-84414357:-|nuORF	ENST00000472688.5_1_1:84411941-84414357:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	363.2538940310478	4	362.733143	1446.90347	2.4965	0.00090555	-0.10844	-3.9336E-05	2.388	0.00086622	362.73318434185416	80.959	0.92672	82.655	82.456	83.383	1.6959					41	29	2	0	0	0	0.14606	1	33894	33894		0	0	1	886830			43777	2801	21492	21582	50629	50629					0.19789225019076184
YVKKKKKKR	9	Unmodified	_YVKKKKKKR_					0	0	0		ENST00000358951.6_1_1:220323782-220323881:-|nuORF	ENST00000358951.6_1_1:220323782-220323881:-|nuORF	ENST00000358951.6_1_1:220323782-220323881:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	603.4119140505791	2	603.413875	1204.8132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.09	1	110.14	109.64	110.64	0.048843								0	0	0	0.42693	1	47510	47510		0	0	1				43778	6014	21493	21583	50630	50630					0.218982204813301
YVKKKKKKR	9	Unmodified	_YVKKKKKKR_					0	0	0		ENST00000358951.6_1_1:220323782-220323881:-|nuORF	ENST00000358951.6_1_1:220323782-220323881:-|nuORF	ENST00000358951.6_1_1:220323782-220323881:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	603.4122192263603	2	603.413875	1204.8132	NaN	NaN	NaN	NaN	NaN	NaN	NaN	109.26	1	109.42	108.92	109.92	0.15898								0	0	0	0.42693	1	47419	47419		0	0	1				43779	6014	21493	21583	50631	50631					0.218982204813301
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2555724978447	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.307	1	96.307	95.807	96.807	0								0	0	0	0.42693	1	40261	40261		0	0	1		+		43780	8189	21494	21584	50632	50632					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2537414431572	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.8	1	96.8	96.3	97.3	0								0	0	0	0.42693	1	40468	40468		0	0	1		+		43781	8189	21494	21584	50633	50633					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2544128298759	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	96.95	1	96.95	96.45	97.45	0								0	0	0	0.42693	1	40530	40530		0	0	1		+		43782	8189	21494	21584	50634	50634					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2533447146416	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.072	1	97.072	96.572	97.572	0								0	0	0	0.42693	1	40581	40581		0	0	1		+		43783	8189	21494	21584	50635	50635					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2549316287041	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.191	1	97.191	96.691	97.691	0								0	0	0	0.42693	1	40633	40633		0	0	1		+		43784	8189	21494	21584	50636	50636					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2550842165947	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.315	1	97.315	96.815	97.815	0								0	0	0	0.42693	1	40685	40685		0	0	1		+		43785	8189	21494	21584	50637	50637					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2546569705009	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.44	1	97.44	96.94	97.94	0								0	0	0	0.42693	1	40737	40737		0	0	1		+		43786	8189	21494	21584	50638	50638					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.657	1	97.657	97.157	98.157	0								0	0	0	0.42693	1	40830	40830		0	0	1		+		43787	8189	21494	21584	50639	50639					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534973025322	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.786	1	97.786	97.286	98.286	0								0	0	0	0.42693	1	40883	40883		0	0	1		+		43788	8189	21494	21584	50640	50640					0.20175288004156755
YVKLLLLLI	9	Unmodified	_YVKLLLLLI_					0	0	0			REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	REV__CD244|p.Q177Rfs*36|1|0.04|ENSG00000122223|chr1:160841351-160841351|G/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_01	1	363.2534057497978	3	363.254494	1086.74165	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.906	1	97.906	97.406	98.406	0								0	0	0	0.42693	1	40934	40934		0	0	1		+		43789	8189	21494	21584	50641	50641					0.20175288004156755
YVKLRKKVLGL	11	Unmodified	_YVKLRKKVLGL_					0	0	0		tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	329.1573974490166	4	329.974871	1315.87038	0.89234	0.00029445	3.7928	0.0012515	4.6851	0.001546	329.97606370922693	46.189	0.52209	48.16	48.033	48.556	1.9703					18	16	2	0	0	0	0.14606	1	19337	19337		0.094841	0	1	351700			43790	16059	21495	21585	50642	50642					0.22507642967093489
YVKLRKKVLGL	11	Unmodified	_YVKLRKKVLGL_					0	0	0		tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	tr|A0A553SFJ1|A0A553SFJ1_NIACIOligopeptidaseFOS=NialliacirculansOX=1397GN=pepFPE=3SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		4	329.974871	1315.87038	0.64246	0.000212	4.8004	0.001584	5.4429	0.001796	330.22731927101944	46.673	0.37865	48.048	47.832	48.211	1.3751	-0.055892	0.00042922	NaN	0.094841	19	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	358350			43791	16059	21495	21585							0.22507642967093489
YVKPLGKLL	9	Unmodified	_YVKPLGKLL_					0	0	0			REV__PI4KA|p.H215Lfs*10|1|0.04|ENSG00000241973|chr22:20819786-20819787|-/A|frameshift_variant	REV__PI4KA|p.H215Lfs*10|1|0.04|ENSG00000241973|chr22:20819786-20819787|-/A|frameshift_variant	MSMS	GG20161007_CRH_Patient100_A02_02	2	344.2274047732353	3	344.226827	1029.65865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	119.81	1	119.86	119.36	120.36	0.041039								0	0	0	0.42693	1	51437	51437		0	0	1		+		43792	11924	21496	21586	50643	50643					0.14500971276152086
YVLDNLVNV	9	Unmodified	_YVLDNLVNV_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	524.7874023318291	2	524.787307	1047.56006	2.1122	0.0011084	-1.8686	-0.00098063	0.24357	0.00012782	524.786424325089	67.983	0.30607	69.361	69.153	69.459	1.3778					15	9	2	0	0	0	0.11643	1	28533	28533		43.858	24.601	1	1031400			43793	5477	21497	21587	50644	50644					0.038183232404207956
YVLDNLVNV	9	Unmodified	_YVLDNLVNV_					0	0	0		nc|ENSG00000278540|Q13085-3|ACACA;nc|ENSG00000278540|Q13085-2|ACACA;nc|ENSG00000278540|Q13085|ACACA;ENSG00000278540|ENST00000616317|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	nc|ENSG00000278540|Q13085-3|ACACA	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	524.787307	1047.56006	1.4801	0.00077673	1.5736	0.00082583	3.0537	0.0016026	524.78741080171	67.477	0.21737	69.347	69.176	69.394	1.87	-0.0072841	0.0017177	NaN	43.858	10	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	978980			43794	5477	21497	21587							0.038183232404207956
YVLHLARRV	9	Unmodified	_YVLHLARRV_					0	0	0		L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	MSMS	GG20161007_CRH_Patient100_W632_01	3	376.2322875857353	3	376.232975	1125.6771	NaN	NaN	NaN	NaN	NaN	NaN	NaN	68.803	1	70.169	69.669	70.669	1.3657								0	0	0	0.42693	1	28871	28871		0.26902	0	1				43795	7747	21498	21588	50645	50645					0.1192852597066576
YVLHLARRVLR	11	Unmodified	_YVLHLARRVLR_					0	0	0		L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	L1PA3_dup1152|chr2:117623254-117629278:+|1.1606400945596698|0.0841542146032081|3.79|394.0|54|2|sense	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	349.2599365115166	4	349.722844	1394.86227	1.9602	0.00068554	2.3997	0.00083924	4.36	0.0015248	349.7233209799607	73.654	0.44568	73.978	73.692	74.138	0.32494					20	13	2	0	0	0	0.14606	1	30795	30795		0.094841	0.011491	1	257780			43796	7747	21499	21589	50646	50646					0.18063508770273984
YVLKLLKL	8	Unmodified	_YVLKLLKL_					0	0	0		NRF1-FAM40B|1|fusion;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;NRF1-FAM40B|2|fusion;ENSG00000128578|ENST00000249344|STRIP2	NRF1-FAM40B|1|fusion	NRF1-FAM40B|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	495.3402282595634	2	495.341521	988.668489	0.88406	0.00043791	-2.9557	-0.0014641	-2.0716	-0.0010262	495.3401588145383	106.18	0.15261	106.18	106.09	106.25	0					24	7	4	0	0	0	0.89198	1	45230	45230		0	0	1	103560000			43797	2372	21500	21590	50647	50647					0.17370159281495035
YVLKLLKL	8	Unmodified	_YVLKLLKL_					0	0	0		NRF1-FAM40B|1|fusion;nc|ENSG00000128578|Q9ULQ0-2|STRIP2;NRF1-FAM40B|2|fusion;ENSG00000128578|ENST00000249344|STRIP2	NRF1-FAM40B|1|fusion	NRF1-FAM40B|1|fusion	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	495.341521	988.668489	3.1486	0.0015596	-5.9797	-0.002962	-2.8311	-0.0014024	495.33943438055746	106.35	0.22914	106.51	106.43	106.66	0.15781	0.16572	-0.002574	NaN	0	17	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4650000			43798	2372	21500	21590							0.17370159281495035
YVLLLILP	8	Unmodified	_YVLLLILP_					0	0	0			REV__ENSG00000107738|ENST00000394957|VSIR	REV__ENSG00000107738|ENST00000394957|VSIR	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	314.7131835818291	3	315.212407	942.615391	0.52331	0.00016495	0.61071	0.0001925	1.134	0.00035746	315.2131886138209	31.691	1.1956	31.982	31.298	32.494	0.29086					52	38	2	0	0	0	2.3239	1	13347	13347		0.45834	0	1	950200	+		43799	9239	21501	21591	50648	50648					0.14178781498856097
YVLLLLLLL	9	Unmodified	_YVLLLLLLL_					0	0	0			REV__ENSG00000161921|ENST00000293778|CXCL16	REV__ENSG00000161921|ENST00000293778|CXCL16	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1073.067675769329	1	1072.73803	1071.73076	0.65791	0.00070576	0.079178	8.4938E-05	0.73709	0.0007907	1073.7362232722849	34.938	0.045338	36.213	36.176	36.221	1.2746					5	4	2	0	0	0	0.85403	1	14661	14661		0	0	1	4760300	+		43800	10627	21502	21592	50649	50649					0.19775885629860568
YVLLLLLLL	9	Unmodified	_YVLLLLLLL_					0	0	0			REV__ENSG00000161921|ENST00000293778|CXCL16	REV__ENSG00000161921|ENST00000293778|CXCL16	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1072.73803	1071.73076	0.65791	0.00070576	0.079178	8.4938E-05	0.73709	0.0007907	1073.7362232722849	34.938	0.045338	36.213	36.176	36.221	1.2746	0	0	NaN	0	5	4	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	4760300	+		43801	10627	21502	21592							0.19775885629860568
YVLLLRFI	8	Unmodified	_YVLLLRFI_					0	0	0			REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|67|3|anti-sense	REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|67|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2236511111259	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.825	1	76.825	76.325	77.325	0								0	0	0	1.0178	1	31982	31982		0	0	1		+		43802	14276	21503	21593	50650	50650					0.1316898862171456
YVLLLRFI	8	Unmodified	_YVLLLRFI_					0	0	0			REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|67|3|anti-sense	REV__L1MB7_dup1945|chr2:26113582-26114608:+|1.9674544307732185|0.2937903993333884|2.74|429.0|67|3|anti-sense	MSMS	GG20161007_CRH_Patient100_A02_01	1	346.2228881716728	3	346.223306	1035.64809	NaN	NaN	NaN	NaN	NaN	NaN	NaN	92.429	1	92.429	91.929	92.929	0								0	0	0	1.0178	1	38625	38625		0	0	1		+		43803	14276	21503	21593	50651	50651					0.1316898862171456
YVLNFRGR	8	Unmodified	_YVLNFRGR_					0	0	0		nc|ENSG00000078246|O75386-2|TULP3;ENSG00000078246|ENST00000448120|TULP3	nc|ENSG00000078246|O75386-2|TULP3	nc|ENSG00000078246|O75386-2|TULP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	513.2919799685478	2	512.787976	1023.5614	2.9627	0.0015192	-2.9107	-0.0014926	0.052021	2.6676E-05	513.2884914507648	50.286	0.53606	51.677	51.324	51.86	1.3911					52	16	5	0	0	0	0.83518	1	20943	20943		18.135	1.1927	1	7479800			43804	974	21504	21594	50652	50652					0.05056002119840741
YVLRAFEDF	9	Unmodified	_YVLRAFEDF_					0	0	0		nc|ENSG00000136153|Q8WWI1-5|LMO7;nc|ENSG00000136153|Q8WWI1-4|LMO7;ENSG00000136153|ENST00000377534|LMO7;nc|ENSG00000136153|Q8WWI1-2|LMO7;nc|ENSG00000136153|Q8WWI1|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	nc|ENSG00000136153|Q8WWI1-5|LMO7	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	580.1802245974541	2	580.292756	1158.57096	1.7481	0.0010144	1.1088	0.00064343	2.8569	0.0016578	580.2931489677177	67.468	0.40185	68.845	68.633	69.035	1.3778					21	12	2	0	0	0	0.098208	1	28257	28257		24.021	8.1734	1	1368800			43805	2709	21505	21595	50653	50653					-0.001982743853204738
YVLRMRKLHRN	11	Unmodified	_YVLRMRKLHRN_					0	0	0			REV__tr|A0A553STU6|A0A553STU6_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05625PE=3SV=1	REV__tr|A0A553STU6|A0A553STU6_NIACIPLP-dependentaminotransferasefamilyproteinOS=NialliacirculansOX=1397GN=CEQ21_05625PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	743.9398681521416	2	743.432804	1484.85106	3.8815	0.0028856	2.698	0.0020058	6.5795	0.0048914	743.4343705064159	89.627	0.41244	91.032	90.828	91.24	1.4045					21	12	2	0	0	0	1.0395	1	37809	37809		0.30703	0	1	487620	+		43806	15262	21506	21596	50654	50654					0.12802363404512107
YVLSVGLSSF	10	Unmodified	_YVLSVGLSSF_					0	0	0			REV__ENST00000379079.6_2_11:32409667-32409850:-|nuORF	REV__ENST00000379079.6_2_11:32409667-32409850:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	536.2911865115166	2	536.289682	1070.56481	2.4342	0.0013054	2.3141	0.001241	4.7483	0.0025464	536.2901734628225	47.297	0.28814	48.68	48.504	48.792	1.3825					19	8	4	0	0	0	0.57775	1	19827	19827		24.021	1.2843	1	1575900	+		43807	12745	21507	21597	50655	50655					0.0323520738318166
YVLVKALHPR	10	Unmodified	_YVLVKALHPR_					0	0	0			REV__nc|ENSG00000130305|Q96P11|NSUN5	REV__nc|ENSG00000130305|Q96P11|NSUN5	MSMS	GG20161007_CRH_Patient100_W632_02	4	399.2484619021416	3	399.248514	1194.72371	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.15	1	110.31	109.81	110.81	0.15228								0	0	0	0.66264	1	47781	47781		0	0	1		+		43808	9777	21508	21598	50656	50656					0.13413965801964878
YVLVNKLDL	9	Unmodified	_YVLVNKLDL_					0	0	0		ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.8217651247978	2	538.82115	1075.62775	1.1412	0.00061491	-1.9285	-0.0010391	-0.78728	-0.0004242	538.8217045895402	52.494	0.34137	53.891	53.712	54.053	1.3966					24	10	3	0	0	0	0.24063	2	22021	21959;22021		28.487	3.0875	1	2182900			43809	4458	21509	21599	50657;50658	50658					0.0929577317122039
YVLVNKLDL	9	Unmodified	_YVLVNKLDL_					0	0	0		ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	539.3210327029228	2	538.82115	1075.62775	1.3484	0.00072653	-2.7235	-0.0014675	-1.3751	-0.00074094	538.8215556761463	51.898	0.46177	53.87	53.676	54.138	1.9722					26	14	3	0	0	0	0.24063	2	21737	21737;21789		28.487	3.0875	1	2210100			43810	4458	21509	21599	50659;50660	50659					0.0929577317122039
YVLVNKLDL	9	Unmodified	_YVLVNKLDL_					0	0	0		ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	ENSG00000177689|ENST00000356790|MAGEB10	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		2	538.82115	1075.62775	1.9071	0.0010276	-0.13407	-7.2238E-05	1.773	0.00095532	538.8209144477495	53.763	0.21663	54.083	53.975	54.192	0.32088	0.13542	0.0012891	NaN	28.487	9	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	668970			43811	4458	21509	21599							0.0929577317122039
YVLVRIIKGE	10	Unmodified	_YVLVRIIKGE_					0	0	0		ENSG00000169314|ENST00000402217|C22orf15	ENSG00000169314|ENST00000402217|C22orf15	ENSG00000169314|ENST00000402217|C22orf15	MSMS	GG20161007_CRH_Patient100_W632_02	4	595.3691284060478	2	595.368798	1188.72304	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.182	1	86.778	86.278	87.278	1.5962								0	0	0	0.66176	1	35769	35769		1.4819	0	1				43812	4082	21510	21600	50661	50661					0.1362312636229035
YVNGVLHD	8	Unmodified	_YVNGVLHD_					0	0	0			REV__nc|ENSG00000160201|Q01081-4|U2AF1	REV__nc|ENSG00000160201|Q01081-4|U2AF1	MSMS	GG20161007_CRH_Patient100_A02_02	2	306.1555969119072	3	306.15562	915.445031	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.79	1	110.83	110.33	111.33	0.047043								0	0	0	1.0178	1	47783	47783		0	0	1		+		43813	10591	21511	21601	50662	50662					-0.01607361170738386
YVNKEKFFNK	10	Unmodified	_YVNKEKFFNK_					0	0	0			REV__ENST00000422840.6_1_16:74486335-74486749:-|nuORF	REV__ENST00000422840.6_1_16:74486335-74486749:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	658.7865478396416	2	658.853512	1315.69247	0.69201	0.00045593	-2.9722	-0.0019583	-2.2802	-0.0015023	658.8517488193935	29.178	0.3336	30.977	30.779	31.112	1.7987					26	10	3	0	0	0	0.12399	1	12255	12255		22.736	10.496	1	1007300	+		43814	12980	21512	21602	50663	50663					0.047253479772280116
YVNRFYIS	8	Unmodified	_YVNRFYIS_					0	0	0			REV__ENST00000545606.5_1_12:67706733-67706835:+|nuORF	REV__ENST00000545606.5_1_12:67706733-67706835:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	531.2744628787041	2	531.274367	1060.53418	NaN	NaN	NaN	NaN	NaN	NaN	NaN	104.71	1	104.89	104.39	105.39	0.1731								0	0	0	1.0178	1	44371	44371		2.5775	1.3841	1		+		43815	13802	21513	21603	50664	50664					0.0063347378879825555
YVPVKLQK	8	Unmodified	_YVPVKLQK_					0	0	0			REV__tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	REV__tr|A0A7D6VWW2|A0A7D6VWW2_9CLOTRibonucleaseJOS=ClostridiumintestinaleOX=36845GN=rnjPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	487.3071166872978	2	487.805303	973.596052	2.2216	0.0010837	2.5331	0.0012357	4.7547	0.0023194	487.80689493881897	43.943	0.35229	45.886	45.701	46.053	1.9438					18	10	2	0	0	0	2.3239	1	18391	18391		5.7604	0.52976	1	437230	+		43816	15545	21514	21604	50665	50665					0.10819825207943268
YVQLIFRIFSR	11	Unmodified	_YVQLIFRIFSR_					0	0	0		AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|20|2|anti-sense	AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|20|2|anti-sense	AluSc8_dup20330|chr19:38289207-38289513:+|1.0995547902654217|0.0012056699720795|9.83|379.0|20|2|anti-sense	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	481.6191284060478	3	481.281995	1440.82415	2.633	0.0012672	2.6982	0.0012986	5.3312	0.0025658	481.2828511221248	89.071	1.161	89.071	88.334	89.495	0					95	36	3	0	0	0	1.0388	1	37201	37201		0.50596	0.34663	1	4938900			43817	41	21515	21605	50666	50666					0.12137578064971422
YVRASLCFFN	10	Unmodified	_YVRASLCFFN_					0	0	0			REV__ENSG00000165572|ENST00000379485|KBTBD6	REV__ENSG00000165572|ENST00000379485|KBTBD6	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	610.1872436404228	2	610.300059	1218.58556	3.6729	0.0022415	3.788	0.0023118	7.4609	0.0045534	610.302789340478	82.003	0.22156	83.673	83.545	83.766	1.67					9	6	2	0	0	0	0.12519	1	34376	34376		7.2892	4.294	1	321810	+		43818	10786	21516	21606	50667	50667					-0.014985255088049598
YVRASLCFFN	10	Unmodified	_YVRASLCFFN_					0	0	0			REV__ENSG00000165572|ENST00000379485|KBTBD6	REV__ENSG00000165572|ENST00000379485|KBTBD6	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	610.300059	1218.58556	3.5947	0.0021938	8.4089	0.005132	12.004	0.0073258	610.8056478924871	82.393	0.161	83.606	83.537	83.698	1.2125	-0.033574	0.0030553	NaN	7.2892	7	4	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	581960	+		43819	10786	21516	21606							-0.014985255088049598
YVRLIQGT	8	Unmodified	_YVRLIQGT_					0	0	0		tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	949.5507690310478	1	949.546542	948.539266	2.7825	0.0026421	1.3887	0.0013187	4.1713	0.0039608	949.5475465492511	107.73	0.16225	107.78	107.68	107.84	0.052444					23	8	4	0	0	0	0.89198	1	46136	46136		0	0	1	46461000			43820	16209	21517	21607	50668	50668					0.06293777651444543
YVRLIQGT	8	Unmodified	_YVRLIQGT_					0	0	0		tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	tr|A0A553SIM0|A0A553SIM0_NIACIKetose-bisphosphatealdolaseOS=NialliacirculansOX=1397GN=CEQ21_15120PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	949.5497924685478	1	949.546542	948.539266	2.6206	0.0024884	0.84399	0.00080141	3.4646	0.0032898	949.5473386247538	107.71	0.1439	107.87	107.77	107.92	0.15781					17	7	3	0	0	0	0.89198	1	46377	46377		0	0	1	59017000			43821	16209	21517	21607	50669	50669					0.06293777651444543
YVRLQLGG	8	Unmodified	_YVRLQLGG_					0	0	0		ENST00000467747.1_1_2:97526365-97527817:-|nuORF;ENST00000474420.1_1_2:97526365-97527817:-|nuORF;ENSG00000168758|ENST00000305476|SEMA4C	ENST00000467747.1_1_2:97526365-97527817:-|nuORF	ENST00000467747.1_1_2:97526365-97527817:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	905.5237304568291	1	905.520328	904.513051	2.8171	0.002551	0.40295	0.00036488	3.2201	0.0029158	905.5207870235769	107.76	0.17848	107.81	107.73	107.91	0.052452					26	9	4	0	0	0	0.89198	1	46186	46186		0	0	1	56200000			43822	4051	21518	21608	50670	50670					0.05697508479966018
YVRRVHVD	8	Unmodified	_YVRRVHVD_					0	0	0		ENSG00000146221|ENST00000371505|TCTE1	ENSG00000146221|ENST00000371505|TCTE1	ENSG00000146221|ENST00000371505|TCTE1	MSMS	GG20161007_CRH_Patient100_A02_01	1	522.2939330935478	2	522.290882	1042.56721	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.32	1	100.32	99.823	100.82	0								0	0	0	1.0178	1	41996	41996		2.5775	0.27475	1				43823	3139	21519	21609	50671	50671					0.04763100631521411
YVSEMVVVF	9	Unmodified	_YVSEMVVVF_					0	0	0			REV__ENST00000276654.9_1_8:105510067-105510277:-|nuORF	REV__ENST00000276654.9_1_8:105510067-105510277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	1072.534472644329	1	1072.53835	1071.53107	2.065	0.0022147	-2.0417	-0.0021898	0.023273	2.4961E-05	1072.534720394609	92.728	0.36092	92.728	92.53	92.891	0					17	11	2	0	0	0	0.087207	1	38748	38748		53.576	2.7205	1	990730	+		43824	12247	21520	21610	50672	50672					-0.0018353738021232857
YVTDNTVCAE	10	Unmodified	_YVTDNTVCAE_					0	0	0			REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.7430297732353	2	557.739696	1113.46484	3.194	0.0017814	3.3347	0.0018599	6.5287	0.0036413	557.7417152927442	82.692	0.2518	83.904	83.795	84.046	1.2125					12	7	2	0	0	0	0.82659	1	34720	34720		9.3831	1.473	1	650300	+		43825	9176	21521	21611	50673	50673					-0.0873539801291372
YVTDNTVCAE	10	Unmodified	_YVTDNTVCAE_					0	0	0			REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	557.739696	1113.46484	3.194	0.0017814	3.3347	0.0018599	6.5287	0.0036413	557.7417152927442	82.692	0.2518	83.904	83.795	84.046	1.2125	0.022727	-0.00043511	NaN	9.3831	12	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	650300	+		43826	9176	21521	21611							-0.0873539801291372
YVTDNTVCAE	10	Unmodified	_YVTDNTVCAE_					0	0	0			REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	REV__ENST00000518596.5_1_19:48737658-48744277:-|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	557.739696	1113.46484	3.3317	0.0018582	4.0316	0.0022486	7.3633	0.0041068	557.742009454566	82.189	0.28306	83.859	83.734	84.017	1.67	-0.022727	0.00034232	NaN	9.3831	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	480940	+		43827	9176	21521	21611							-0.0873539801291372
YVTRALVAT	9	Unmodified	_YVTRALVAT_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	993.5747558474541	1	993.572757	992.565481	3.7317	0.0037077	-0.78358	-0.00077854	2.9481	0.0029292	993.5709964265163	107.65	0.1679	107.81	107.68	107.85	0.15795					21	8	3	0	0	0	0.85403	1	46299	46299		0	0	1	39880000	+		43828	11572	21522	21612	50674	50674					0.06890046822877594
YVTRALVAT	9	Unmodified	_YVTRALVAT_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_02	2		1	993.572757	992.565481	2.9186	0.0028998	0.15483	0.00015383	3.0734	0.0030537	993.5727865277028	107.69	0.1652	107.74	107.64	107.8	0.052452	-0.045458	0.00086283	NaN	0	21	8	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	44891000	+		43829	11572	21522	21612							0.06890046822877594
YVTRALVAT	9	Unmodified	_YVTRALVAT_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	993.572757	992.565481	4.4622	0.0044335	-1.4243	-0.0014151	3.0379	0.0030184	993.5707433169197	107.66	0.14581	107.82	107.72	107.86	0.15781	0.027342	-0.0007061	NaN	0	20	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	97611000	+		43830	11572	21522	21612							0.06890046822877594
YVTRALVAT	9	Unmodified	_YVTRALVAT_					0	0	0			REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	REV__nc|ENSG00000188559|Q2PPJ7-3|RALGAPA2	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		1	993.572757	992.565481	3.7317	0.0037077	-0.78358	-0.00077854	2.9481	0.0029292	993.5709964265163	107.65	0.1679	107.81	107.68	107.85	0.15795	0.018116	-6.9546E-05	NaN	0	21	8	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	39880000	+		43831	11572	21522	21612							0.06890046822877594
YVTVDEFMVL	10	Unmodified	_YVTVDEFMVL_					0	0	0			REV__ENSG00000171574|ENST00000306910|ZNF584	REV__ENSG00000171574|ENST00000306910|ZNF584	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1216.599536120892	1	1215.59659	1214.58931	1.2534	0.0015236	-0.51209	-0.0006225	0.74128	0.0009011	1215.5962942122687	84.242	0.33879	85.401	85.251	85.589	1.159					20	10	3	0	0	0	0.51515	1	35330	35330		26.884	6.43	1	4885500	+		43832	11035	21523	21613	50675	50675					-0.009399005256000237
YVTVDEFMVL	10	Unmodified	_YVTVDEFMVL_					0	0	0			REV__ENSG00000171574|ENST00000306910|ZNF584	REV__ENSG00000171574|ENST00000306910|ZNF584	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1215.601733386517	1	1215.59659	1214.58931	0.95128	0.0011564	-1.0423	-0.001267	-0.091044	-0.00011067	1215.5969304891173	83.79	0.33749	85.428	85.221	85.559	1.6379					14	10	2	0	0	0	0.41677	1	35187	35187		32.305	0	1	5369400	+		43833	11035	21523	21613	50676	50676					-0.009399005256000237
YVVFTTLVLL	10	Unmodified	_YVVFTTLVLL_					0	0	0		nc|ENSG00000170113|Q7RTP0-2|NIPA1;ENSG00000170113|ENST00000337435|NIPA1	nc|ENSG00000170113|Q7RTP0-2|NIPA1	nc|ENSG00000170113|Q7RTP0-2|NIPA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	584.3577148318291	2	584.354825	1166.6951	2.7115	0.0015845	2.1379	0.0012493	4.8494	0.0028338	584.3563008001049	73.616	1.4667	75.413	74.402	75.869	1.7962					117	46	3	0	0	0	0.84024	2	31050	30985;31050		7.9102	0	1	4708700			43834	4128	21524	21614	50677;50678	50678					0.1184180338218539
YVVGLKVL	8	Unmodified	_YVVGLKVL_					0	0	0			REV__tr|A0A7D6VQJ6|A0A7D6VQJ6_9CLOTFe-SclusterassemblyproteinSufBOS=ClostridiumintestinaleOX=36845GN=sufBPE=3SV=1	REV__tr|A0A7D6VQJ6|A0A7D6VQJ6_9CLOTFe-SclusterassemblyproteinSufBOS=ClostridiumintestinaleOX=36845GN=sufBPE=3SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	445.1203796267509	2	445.789121	889.56369	1.8277	0.00081477	0.31233	0.00013923	2.14	0.000954	445.78895240338574	39.596	0.24427	41.458	41.34	41.584	1.8624					14	7	2	0	0	0	2.3239	1	16604	16604		6.3541	3.4649	1	954730	+		43835	15387	21525	21615	50679	50679					0.11449037804948148
YVVKGKLD	8	Unmodified	_YVVKGKLD_					0	0	0		ENST00000532378.5_1_11:14901840-14912470:-|nuORF	ENST00000532378.5_1_11:14901840-14912470:-|nuORF	ENST00000532378.5_1_11:14901840-14912470:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	461.2736389040947	2	461.273835	920.533118	NaN	NaN	NaN	NaN	NaN	NaN	NaN	105.07	1	105.12	104.62	105.62	0.056801								0	0	0	1.0178	1	44467	44467		0.79363	0	1				43836	7177	21526	21616	50680	50680					0.06967259419900529
YVVKTGAKTA	10	Unmodified	_YVVKTGAKTA_					0	0	0			REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1037.600634753704	1	1037.59897	1036.5917	2.5746	0.0026714	0.016448	1.7067E-05	2.5911	0.0026885	1037.5984553077508	107.59	0.14691	107.74	107.68	107.83	0.15781					18	7	3	0	0	0	0.89803	1	46326	46326		0	0	1	31626000	+		43837	15827	21527	21617	50681	50681					0.07486315994401593
YVVKTGAKTA	10	Unmodified	_YVVKTGAKTA_					0	0	0			REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		1	1037.59897	1036.5917	3.221	0.0033421	0.5387	0.00055896	3.7597	0.0039011	1037.599319956663	107.62	0.15344	107.67	107.58	107.73	0.052452	-0.033525	-0.00035184	NaN	0	21	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	22896000	+		43838	15827	21527	21617							0.07486315994401593
YVVKTGAKTA	10	Unmodified	_YVVKTGAKTA_					0	0	0			REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	REV__tr|A0A7D7A1J1|A0A7D7A1J1_9CLOTDUF1232domain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_15570PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		1	1037.59897	1036.5917	2.5746	0.0026714	0.016448	1.7067E-05	2.5911	0.0026885	1037.5984553077508	107.59	0.14691	107.74	107.68	107.83	0.15781	0.041679	-0.00089373	NaN	0	18	7	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	31626000	+		43839	15827	21527	21617							0.07486315994401593
YVVNLLLV	8	Unmodified	_YVVNLLLV_					0	0	0		ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	ENSG00000279514|ENST00000623907|OR4C16	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	467.1845580935478	2	466.794404	931.574254	3.4446	0.0016079	2.1944	0.0010244	5.639	0.0026323	466.79537602737025	109.11	0.20575	109.16	109.06	109.27	0.050652					13	8	2	0	0	0	2.3239	1	47038	47038		0.79363	0	1	2941600			43840	5481	21528	21618	50682	50682					0.10573020459378313
YVVRYHSI	8	Unmodified	_YVVRYHSI_					0	0	0			REV__USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	REV__USH2A|p.A4046Dfs*53|1|0.04|ENSG00000042781|chr1:215680306-215680307|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	519.1396972537041	2	518.782359	1035.55016	2.6316	0.0013652	0.21522	0.00011165	2.8468	0.0014769	518.7822067763659	47.718	0.36923	49.694	49.405	49.774	1.976					15	11	2	0	0	0	2.3239	1	19995	19995		6.3541	0	1	600820	+		43841	8599	21529	21619	50683	50683					0.03381180025712638
YVVVGLSL	8	Unmodified	_YVVVGLSL_					0	0	0		nc|ENSG00000290203|Q96PH1-5|NOX5;ENST00000527315.5_1_15:69323805-69349033:+|nuORF;nc|ENSG00000290203|Q96PH1-4|NOX5;nc|ENSG00000290203|Q96PH1-6|NOX5;nc|ENSG00000290203|Q96PH1-3|NOX5;nc|ENSG00000290203|Q96PH1-2|NOX5;ENSG00000255346|ENST00000388866|NOX5	nc|ENSG00000290203|Q96PH1-5|NOX5	nc|ENSG00000290203|Q96PH1-5|NOX5	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	425.3138305544853	2	425.257654	848.500755	0.40869	0.0001738	3.1928	0.0013578	3.6015	0.0015316	425.2589178925945	99.93	0.12134	99.93	99.854	99.976	0					5	3	2	0	0	0	2.3239	1	41848	41848		0	0	1	1372800			43842	5402	21530	21620	50684	50684					0.07044472016923464
YVYEYLLHV	9	Unmodified	_YVYEYLLHV_					0	0	0		nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-3|SSBP3;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3	nc|ENSG00000145687|P81877-2|SSBP2	nc|ENSG00000145687|P81877-2|SSBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	600.3124877810478	2	599.810782	1197.60701	2.0346	0.0012204	-2.8934	-0.0017355	-0.85879	-0.00051511	599.8087080118231	67.185	0.29451	67.185	67.054	67.349	0					15	9	2	0	0	0	0.13437	2	27975	27975;28029		40.449	28.208	1	1195400			43843	3117	21531	21621	50685;50686	50685					0.016111827915665344
YVYEYLLHV	9	Unmodified	_YVYEYLLHV_					0	0	0		nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-3|SSBP3;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3	nc|ENSG00000145687|P81877-2|SSBP2	nc|ENSG00000145687|P81877-2|SSBP2	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	599.8133422732353	2	599.810782	1197.60701	1.7724	0.0010631	1.342	0.00080495	3.1144	0.001868	599.8117014152134	66.704	0.2513	67.028	66.907	67.158	0.32449					17	7	3	0	0	0	0.052478	1	27926	27926		67.035	38.548	1	1230200			43844	3117	21531	21621	50687	50687					0.016111827915665344
YVYEYLLHV	9	Unmodified	_YVYEYLLHV_					0	0	0		nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-3|SSBP3;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3	nc|ENSG00000145687|P81877-2|SSBP2	nc|ENSG00000145687|P81877-2|SSBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.8113891482353	2	599.810782	1197.60701	2.8087	0.0016847	-1.1371	-0.00068204	1.6716	0.0010026	599.8102651815	65.478	0.59077	66.877	66.443	67.034	1.3989					40	18	3	0	0	0	0.052478	2	27438	27438;27490		67.035	38.548	1	3058100			43845	3117	21531	21621	50688;50689	50688					0.016111827915665344
YVYEYLLHV	9	Unmodified	_YVYEYLLHV_					0	0	0		nc|ENSG00000145687|P81877-2|SSBP2;nc|ENSG00000145687|P81877-4|SSBP2;nc|ENSG00000145687|P81877-5|SSBP2;nc|ENSG00000145687|P81877-3|SSBP2;nc|ENSG00000157216|Q9BWW4-2|SSBP3;nc|ENSG00000145687|P81877|SSBP2;nc|ENSG00000157216|Q9BWW4-3|SSBP3;ENSG00000145687|ENST00000615665|SSBP2;ENSG00000157216|ENST00000610401|SSBP3	nc|ENSG00000145687|P81877-2|SSBP2	nc|ENSG00000145687|P81877-2|SSBP2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.8119384646416	2	599.810782	1197.60701	1.8915	0.0011346	-0.43194	-0.00025909	1.4596	0.00087548	599.8104250704432	65.044	0.59595	66.953	66.499	67.095	1.9085					41	18	3	0	0	0	0.04206	2	27303	27254;27303		74.396	38.352	1	2664300			43846	3117	21531	21621	50690;50691	50691					0.016111827915665344
YVYLLNRT	8	Unmodified	_YVYLLNRT_					0	0	0			REV__ENST00000483757.5_1_9:366502-369227:+|nuORF	REV__ENST00000483757.5_1_9:366502-369227:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	521.8178588747978	2	521.290017	1040.56548	0.49421	0.00025763	2.9032	0.0015134	3.3974	0.001771	521.2911476546507	50.625	0.24279	52.6	52.454	52.697	1.9753					10	7	2	0	0	0	2.3239	1	21173	21173		28.487	0	1	978470	+		43847	12784	21532	21622	50692	50692					0.0468204682290434
YVYQTFSI	8	Unmodified	_YVYQTFSI_					0	0	0		tr|A0A553SMF4|A0A553SMF4_NIACIABMdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22465PE=4SV=1	tr|A0A553SMF4|A0A553SMF4_NIACIABMdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22465PE=4SV=1	tr|A0A553SMF4|A0A553SMF4_NIACIABMdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_22465PE=4SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	510.7582885622978	2	510.755475	1019.4964	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.952	1	76.734	76.234	77.234	1.7817								0	0	0	1.0178	1	31439	31439		19.439	1.304	1				43848	16376	21533	21623	50693	50693					-0.012570371966830862
YVYRELVYW	9	Unmodified	_YVYRELVYW_					0	0	0			REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	REV__nc|ENSG00000173120|Q9Y2K7-3|KDM2A	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8881408572197	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.5628	1	8.2935	7.7935	8.7935	0.73074								0	0	0	0.42693	1	3141	3141		0.26902	0	1		+		43849	11083	21534	21624	50694	50694					0.011222740571838585
YWCAKIIQCIL	11	Unmodified	_YWCAKIIQCIL_					0	0	0		SLC9C2|p.I375Sfs*38|1|0.06|ENSG00000162753|chr1:173557432-173557432|T/-|frameshift_variant;ENSG00000162753|ENST00000367714|SLC9C2	SLC9C2|p.I375Sfs*38|1|0.06|ENSG00000162753|chr1:173557432-173557432|T/-|frameshift_variant	SLC9C2|p.I375Sfs*38|1|0.06|ENSG00000162753|chr1:173557432-173557432|T/-|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_02	4	451.9078857302666	3	451.906772	1352.69849	NaN	NaN	NaN	NaN	NaN	NaN	NaN	110.91	1	111.06	110.56	111.56	0.15038								0	0	0	0.63775	1	48084	48084		0	0	1				43850	3645	21535	21625	50695	50695					0.03624406892913612
YWDNRLYFSWK	11	Unmodified	_YWDNRLYFSWK_					0	0	0		tr|A0A7D6VSH7|A0A7D6VSH7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22835PE=4SV=1	tr|A0A7D6VSH7|A0A7D6VSH7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22835PE=4SV=1	tr|A0A7D6VSH7|A0A7D6VSH7_9CLOThistidinekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_22835PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	526.5891601443291	3	526.589376	1576.7463	1.844	0.00097105	0.0087597	4.6128E-06	1.8528	0.00097566	526.5891737087593	40.708	0.94256	40.708	40.331	41.274	0					85	29	4	0	0	0	1.039	3	16991	16991;17039;17089		0.45452	0	1	2725300			43851	16870	21536	21626	50696;50697;50698	50696					-0.01900479591063231
YWDRERPDYG	10	Unmodified	_YWDRERPDYG_					0	0	0			REV__tr|A0A553SF25|A0A553SF25_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08090PE=3SV=1	REV__tr|A0A553SF25|A0A553SF25_NIACIHAMPdomain-containingproteinOS=NialliacirculansOX=1397GN=CEQ21_08090PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	452.8712341189384	3	452.870431	1355.58946	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.308	1	5.9293	5.4293	6.4293	0.62127								0	0	0	0.66254	1	2192	2192		0.15932	0	1		+		43852	14683	21537	21627	50699	50699					-0.0741076448136937
YWFEEKEYYEK	11	Unmodified	_YWFEEKEYYEK_					0	0	0		tr|A0A7D6W2X5|A0A7D6W2X5_9CLOTGBSBsp-likerepeat-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07945PE=4SV=1	tr|A0A7D6W2X5|A0A7D6W2X5_9CLOTGBSBsp-likerepeat-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07945PE=4SV=1	tr|A0A7D6W2X5|A0A7D6W2X5_9CLOTGBSBsp-likerepeat-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_07945PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	538.2131835818291	3	538.576802	1612.70858	1.1198	0.0006031	2.5232	0.0013589	3.643	0.001962	538.5780293772661	29.091	0.75794	29.371	29.107	29.865	0.2793					55	24	3	0	0	0	0.14606	1	12065	12065		0.45452	0.37117	1	3109200			43853	17039	21538	21628	50700	50700					-0.07327035367188728
YWFHLFLL	8	Unmodified	_YWFHLFLL_					0	0	0			REV__ENSG00000164181|ENST00000508821|ELOVL7	REV__ENSG00000164181|ENST00000508821|ELOVL7	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	570.3112060427666	2	569.807845	1137.60114	0.77184	0.0004398	1.9942	0.0011363	2.7661	0.0015761	569.8091333349182	24.602	0.21394	24.602	24.429	24.643	0					11	6	3	0	0	0	0.89176	1	10254	10254		0.79363	0	1	408250	+		43854	10723	21539	21629	50701	50701					0.037841290705500796
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885681033134	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2835	1	3.2835	2.7835	3.7835	0								0	0	0	0.63775	1	1347	1347		0	0	1				43855	17099	21540	21630	50702	50702					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.3864	1	3.3864	2.8864	3.8864	0								0	0	0	0.63775	1	1390	1390		0	0	1				43856	17099	21540	21630	50703	50703					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.5105	1	3.5105	3.0105	4.0105	0								0	0	0	0.63775	1	1441	1441		0	0	1				43857	17099	21540	21630	50704	50704					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886901736259	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.6393	1	3.6393	3.1393	4.1393	0								0	0	0	0.63775	1	1495	1495		0	0	1				43858	17099	21540	21630	50705	50705					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.8704	1	3.8704	3.3704	4.3704	0								0	0	0	0.63775	1	1590	1590		0	0	1				43859	17099	21540	21630	50706	50706					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887206912041	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5566	1	4.5566	4.0566	5.0566	0								0	0	0	0.63775	1	1872	1872		0	0	1				43860	17099	21540	21630	50707	50707					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8890258669853	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.6688	1	4.6688	4.1688	5.1688	0								0	0	0	0.63775	1	1918	1918		0	0	1				43861	17099	21540	21630	50708	50708					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8882934451103	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.78	1	4.78	4.28	5.28	0								0	0	0	0.63775	1	1964	1964		0	0	1				43862	17099	21540	21630	50709	50709					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.9804	1	4.9804	4.4804	5.4804	0								0	0	0	0.63775	1	2046	2046		0	0	1				43863	17099	21540	21630	50710	50710					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.1793	1	5.1793	4.6793	5.6793	0								0	0	0	0.63775	1	2127	2127		0	0	1				43864	17099	21540	21630	50711	50711					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885681033134	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.4124	1	5.4124	4.9124	5.9124	0								0	0	0	0.63775	1	2223	2223		0	0	1				43865	17099	21540	21630	50712	50712					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.5361	1	5.5361	5.0361	6.0361	0								0	0	0	0.63775	1	2273	2273		0	0	1				43866	17099	21540	21630	50713	50713					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8886291384697	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	5.8938	1	5.8938	5.3938	6.3938	0								0	0	0	0.63775	1	2422	2422		0	0	1				43867	17099	21540	21630	50714	50714					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8887206912041	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.0555	1	7.0555	6.5555	7.5555	0								0	0	0	0.63775	1	2900	2900		0	0	1				43868	17099	21540	21630	50715	50715					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8884460330009	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.3203	1	7.3203	6.8203	7.8203	0								0	0	0	0.63775	1	3010	3010		0	0	1				43869	17099	21540	21630	50716	50716					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_A02_01	1	430.8883239626884	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	7.4446	1	7.4446	6.9446	7.9446	0								0	0	0	0.63775	1	3061	3061		0	0	1				43870	17099	21540	21630	50717	50717					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.1656	1	1.8189	1.3189	2.3189	0.65331								0	0	0	0.63775	1	477	477		0	0	1				43871	17099	21540	21630	50718	50718					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.3821	1	2.0355	1.5355	2.5355	0.65331								0	0	0	0.63775	1	566	566		0	0	1				43872	17099	21540	21630	50719	50719					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5045	1	2.1578	1.6578	2.6578	0.65331								0	0	0	0.63775	1	617	617		0	0	1				43873	17099	21540	21630	50720	50720					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.7317	1	2.385	1.885	2.885	0.65331								0	0	0	0.63775	1	710	710		0	0	1				43874	17099	21540	21630	50721	50721					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8884460330009	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.844	1	2.4974	1.9974	2.9974	0.65331								0	0	0	0.63775	1	757	757		0	0	1				43875	17099	21540	21630	50722	50722					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.9897	1	2.6239	2.1239	3.1239	0.63417								0	0	0	0.63775	1	816	816		0	0	1				43876	17099	21540	21630	50723	50723					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.1017	1	2.7358	2.2358	3.2358	0.63417								0	0	0	0.63775	1	862	862		0	0	1				43877	17099	21540	21630	50724	50724					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885986208916	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.224	1	2.8582	2.3582	3.3582	0.63417								0	0	0	0.63775	1	914	914		0	0	1				43878	17099	21540	21630	50725	50725					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886291384697	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.3363	1	2.9705	2.4705	3.4705	0.63417								0	0	0	0.63775	1	961	961		0	0	1				43879	17099	21540	21630	50726	50726					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885070681572	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.4378	1	3.072	2.572	3.572	0.63417								0	0	0	0.63775	1	1003	1003		0	0	1				43880	17099	21540	21630	50727	50727					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	2.551	1	3.1851	2.6851	3.6851	0.63417								0	0	0	0.63775	1	1050	1050		0	0	1				43881	17099	21540	21630	50728	50728					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8886901736259	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	12.908	1	13.634	13.134	14.134	0.72639								0	0	0	0.63775	1	5360	5360		0	0	1				43882	17099	21540	21630	50729	50729					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8885375857353	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.439	1	2.1874	1.6874	2.6874	0.7484								0	0	0	0.63775	1	595	595		0	0	1				43883	17099	21540	21630	50730	50730					0.011222740571611212
YWFIKSGVSGF	11	Unmodified	_YWFIKSGVSGF_					0	0	0		tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	tr|A0A7D6ZIA9|A0A7D6ZIA9_9CLOTPyruvatekinaseOS=ClostridiumintestinaleOX=36845GN=HZF06_06330PE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	430.8886596560478	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	1.5535	1	2.3019	1.8019	2.8019	0.7484								0	0	0	0.63775	1	643	643		0	0	1				43884	17099	21540	21630	50731	50731					0.011222740571611212
YWFYYEQHNKK	11	Unmodified	_YWFYYEQHNKK_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_01	1	536.1635619997978	3	535.921014	1604.74121	1.6145	0.00086527	-2.3269	-0.001247	-0.71234	-0.00038176	536.2538159934988	40.061	0.38273	40.061	39.883	40.266	0					30	11	4	0	0	0	0.14606	1	16831	16831		0.45452	0	1	1183000	+		43885	13621	21541	21631	50732	50732					-0.03696783453688113
YWFYYEQHNKK	11	Unmodified	_YWFYYEQHNKK_					0	0	0			REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	REV__ENST00000519969.5_2_8:93966716-93977788:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	536.1627685427666	3	535.921014	1604.74121	1.7138	0.00091848	-3.7689	-0.0020198	-2.055	-0.0011013	535.9195958457517	39.635	0.34455	39.947	39.767	40.111	0.31263					22	10	3	0	0	0	0.14606	1	16662	16662		1.3296	0.87513	1	911730	+		43886	13621	21541	21631	50733	50733					-0.03696783453688113
YWKKNKYKLMI	11	Unmodified	_YWKKNKYKLMI_					0	0	0			REV__STXBP5|p.D1145N|1|0.12|ENSG00000164506|chr6:147384732-147384732|G/A|missense_variant	REV__STXBP5|p.D1145N|1|0.12|ENSG00000164506|chr6:147384732-147384732|G/A|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	757.9363891482353	2	757.93124	1513.84793	3.659	0.0027732	3.4642	0.0026256	7.1231	0.0053989	758.4361656052151	86.373	0.53951	87.92	87.663	88.203	1.547					120	19	8	0	0	0	1.0393	1	36338	36338		0.35063	0.043601	1	43001000	+		43887	14667	21542	21632	50734	50734					0.11155675507143314
YWKKNKYKLMI	11	Unmodified	_YWKKNKYKLMI_					0	0	0			REV__STXBP5|p.D1145N|1|0.12|ENSG00000164506|chr6:147384732-147384732|G/A|missense_variant	REV__STXBP5|p.D1145N|1|0.12|ENSG00000164506|chr6:147384732-147384732|G/A|missense_variant	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		2	757.93124	1513.84793	3.0378	0.0023024	4.5199	0.0034258	7.5577	0.0057282	757.9346334011002	86.728	0.56137	87.82	87.528	88.09	1.0918	-0.050166	0.00078308	NaN	0.35063	122	20	8	NaN	NaN	NaN	NaN	0				NaN	NaN	0	36145000	+		43888	14667	21542	21632							0.11155675507143314
YWKRPQFDY	9	Unmodified	_YWKRPQFDY_					0	0	0			REV__nc|ENSG00000172915|Q8NFP9|NBEA	REV__nc|ENSG00000172915|Q8NFP9|NBEA	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8816711306572	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.29	1	111.44	110.94	111.94	0.15038								0	0	0	0.42693	1	48232	48232		0	0	1		+		43889	11078	21543	21633	50735	50735					-0.019437807453641653
YWMHVQNTF	9	Unmodified	_YWMHVQNTF_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	613.2776977419853	2	613.276583	1224.53861	1.8926	0.0011607	-0.36037	-0.000221	1.5322	0.00093967	613.2765582707459	46.901	1.3329	48.284	47.964	49.297	1.3825					118	41	5	0	0	0	5.8475E-07	7	19610	19563;19610;19649;19688;19731;19787;19837		188.58	130.86	1	36299000			43890	1881	21544	21634	50736;50737;50738;50739;50740;50741;50742	50737					-0.06467385059931985
YWMHVQNTF	9	Unmodified	_YWMHVQNTF_					0	0	0		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.2777587771416	2	613.276583	1224.53861	1.5876	0.00097361	0.11206	6.8724E-05	1.6996	0.0010423	613.2768306862007	46.404	1.1799	48.375	48.126	49.306	1.9703					113	37	5	0	0	0	2.0192E-05	8	19461	19376;19422;19461;19501;19553;19604;19657;19707		172.91	102.57	1	39885000			43891	1881	21544	21634	50743;50744;50745;50746;50747;50748;50749;50750	50745					-0.06467385059931985
YWMHVQNTF	9	Oxidation (M)	_YWM(Oxidation (M))HVQNTF_		YWM(1)HVQNTF		YWM(74)HVQNTF	0	0	1		ENSG00000114796|ENST00000242810|KLHL24;nc|ENSG00000114796|Q6TFL4-2|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	ENSG00000114796|ENST00000242810|KLHL24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	621.2734252810478	2	621.274041	1240.53353	0.41819	0.00025981	-0.35948	-0.00022333	0.058714	3.6477E-05	621.7759257334889	32.828	0.30192	34.653	34.461	34.762	1.8246					37	19	3	0	0	0	0.042029	2	13758	13714;13758		74.423	54.008	1	6109800			43892	1881	21544	21635	50751;50752	50752		33			-0.07711688922563553
YWPDVIHSF	9	Unmodified	_YWPDVIHSF_					0	0	0		ENST00000496851.6_1_6:167347386-167366008:-|nuORF;ENST00000499370.6_1_6:167347461-167366008:-|nuORF;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;ENSG00000026297|ENST00000508775|RNASET2	ENST00000496851.6_1_6:167347386-167366008:-|nuORF	ENST00000496851.6_1_6:167347386-167366008:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	582.2781249880791	2	582.279649	1162.54475	1.7967	0.0010462	-2.588	-0.001507	-0.79136	-0.00046079	582.2779408905276	66.63	0.62337	68.019	67.719	68.343	1.3888					59	19	4	0	0	0	0.03795	3	27942	27896;27942;27993		77.984	53.31	1	5891900			43893	627	21545	21636	50753;50754;50755	50754					-0.030025435567722525
YWPDVIHSF	9	Unmodified	_YWPDVIHSF_					0	0	0		ENST00000496851.6_1_6:167347386-167366008:-|nuORF;ENST00000499370.6_1_6:167347461-167366008:-|nuORF;ENST00000358165.7_1_6:167352234-167370622:-|nuORF;ENST00000028008.9_1_6:167343078-167365992:-|nuORF;ENSG00000026297|ENST00000508775|RNASET2	ENST00000496851.6_1_6:167347386-167366008:-|nuORF	ENST00000496851.6_1_6:167347386-167366008:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	582.2794067263603	2	582.279649	1162.54475	1.6537	0.0009629	-3.3	-0.0019215	-1.6463	-0.00095863	582.2778024943452	66.181	0.59613	68.069	67.808	68.404	1.8889					54	18	4	0	0	0	0.051699	3	27809	27711;27758;27809		67.344	42.67	1	4706100			43894	627	21545	21636	50756;50757;50758	50758					-0.030025435567722525
YWRQTLHMR	9	Unmodified	_YWRQTLHMR_					0	0	0		ENST00000439586.1_1_Y:7937590-7937806:-|nuORF	ENST00000439586.1_1_Y:7937590-7937806:-|nuORF	ENST00000439586.1_1_Y:7937590-7937806:-|nuORF	MSMS	GG20161007_CRH_Patient100_A02_02	2	430.8884765505791	3	430.888991	1289.64514	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.8941	1	8.9705	8.4705	9.4705	0.07632								0	0	0	0.42693	1	3683	3683		0.26902	0	1				43895	6547	21546	21637	50759	50759					0.011907902252232816
YWRYTQWLS	9	Unmodified	_YWRYTQWLS_					0	0	0		ENST00000369578.6_1_6:87925633-87925750:+|nuORF	ENST00000369578.6_1_6:87925633-87925750:+|nuORF	ENST00000369578.6_1_6:87925633-87925750:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8819152712822	3	434.880379	1301.61931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	111.39	1	111.54	111.04	112.04	0.15038								0	0	0	0.42693	1	48273	48273		0.26902	0	1				43896	6097	21547	21638	50760	50760					-0.019437807453869027
YWWGELNK	8	Unmodified	_YWWGELNK_					0	0	0			REV__SH3PXD2A-RB1|1|fusion	REV__SH3PXD2A-RB1|1|fusion	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	365.8453552126884	3	365.846787	1094.51853	-0.93062	-0.00034047	-2.2623	-0.00082764	-3.1929	-0.0011681	365.84579077544697	15.016	0.37737	15.785	15.58	15.957	0.76937					24	11	3	0	0	0	0.87213	1	6272	6272		13.906	0.86358	1	1750500	+		43897	14619	21548	21639	50761	50761					-0.024948127282414134
YYALEVSYF	9	Unmodified	_YYALEVSYF_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	577.7748290896416	2	577.773865	1153.53318	3.2768	0.0018933	-0.65827	-0.00038033	2.6186	0.0015129	577.7735156297433	74.227	0.39409	75.545	75.374	75.768	1.318					27	12	3	0	0	0	0.28226	1	31150	31150		26.341	6.9023	1	3320100			43898	2125	21549	21640	50762	50762					-0.037447853707590184
YYALEVSYF	9	Unmodified	_YYALEVSYF_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1154.545458972454	1	1154.54045	1153.53318	3.0011	0.0034648	0.59333	0.00068502	3.5944	0.0041499	1154.5403834114784	74.266	0.39409	75.584	75.374	75.768	1.318					25	12	3	0	0	0	0.20838	1	31154	31154		32.117	5.2333	1	2664600			43899	2125	21549	21640	50763	50763					-0.037447853707590184
YYALEVSYF	9	Unmodified	_YYALEVSYF_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1154.543994128704	1	1154.54045	1153.53318	2.6176	0.0030222	0.40417	0.00046663	3.0218	0.0034888	1154.5399971804868	73.756	0.37063	75.552	75.377	75.748	1.7962					28	11	3	0	0	0	0.18999	2	30921	30921;30972		34.187	14.93	1	3062900			43900	2125	21549	21640	50764;50765	50764					-0.037447853707590184
YYALEVSYF	9	Unmodified	_YYALEVSYF_					0	0	0		ENST00000521386.5_1_8:67958045-67971691:-|nuORF;ENST00000521509.5_1_8:67955470-67971691:-|nuORF;ENSG00000121022|ENST00000357849|COPS5	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	ENST00000521386.5_1_8:67958045-67971691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	577.7738525271416	2	577.773865	1153.53318	2.9396	0.0016984	-1.6966	-0.00098027	1.243	0.00071815	577.772090741905	73.761	0.46043	75.558	75.377	75.838	1.7962					28	14	3	0	0	0	0.51832	1	30949	30949		14.582	1.0738	1	1664200			43901	2125	21549	21640	50766	50766					-0.037447853707590184
YYASFLEVL	9	Unmodified	_YYASFLEVL_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;ENST00000558053.1_1_15:44846774-44849853:+|nuORF;ENST00000451571.1_1_9:79607732-79607996:+|nuORF	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7872192263603	2	552.784233	1103.55391	5.7756	0.0031926	0.51748	0.00028606	6.293	0.0034787	552.7839985991699	88.762	0.32318	89.818	89.659	89.982	1.0562					12	9	2	0	0	0	0.20838	1	37418	37418		32.117	17.279	1	1078100			43902	1450	21550	21641	50767	50767					0.006278050089122189
YYASFLEVL	9	Unmodified	_YYASFLEVL_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;ENST00000558053.1_1_15:44846774-44849853:+|nuORF;ENST00000451571.1_1_9:79607732-79607996:+|nuORF	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	552.7870971560478	2	552.784233	1103.55391	4.5908	0.0025377	1.6184	0.00089461	6.2092	0.0034324	552.7848300970023	88.301	0.28441	89.747	89.604	89.889	1.4467					12	8	2	0	0	0	0.64949	1	37209	37209		9.3474	1.4373	1	1573700			43903	1450	21550	21641	50768	50768					0.006278050089122189
YYASFLEVL	9	Unmodified	_YYASFLEVL_					0	0	0		nc|ENSG00000104131|O75822-3|EIF3J;ENSG00000104131|ENST00000261868|EIF3J;ENST00000558053.1_1_15:44846774-44849853:+|nuORF;ENST00000451571.1_1_9:79607732-79607996:+|nuORF	nc|ENSG00000104131|O75822-3|EIF3J	nc|ENSG00000104131|O75822-3|EIF3J	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		2	552.784233	1103.55391	4.5854	0.0025348	-1.1063	-0.00061154	3.4791	0.0019232	552.7829783556897	87.803	0.35021	89.299	89.078	89.428	1.4953	-0.24412	0.00013212	NaN	32.117	24	10	3	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1357300			43904	1450	21550	21641							0.006278050089122189
YYASQHWPF	9	Unmodified	_YYASQHWPF_					0	0	0		ENST00000488223.5_1_10:74886420-74890658:+|nuORF;nc|ENSG00000166321|Q86X67-3|NUDT13;ENSG00000166321|ENST00000357321|NUDT13	ENST00000488223.5_1_10:74886420-74890658:+|nuORF	ENST00000488223.5_1_10:74886420-74890658:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	599.7733032107353	2	599.769448	1197.52434	3.1658	0.0018987	3.0547	0.0018321	6.2204	0.0037308	599.7720427050336	62.347	0.45235	64.304	64.061	64.514	1.9571					57	14	5	0	0	0	0.10294	3	26095	26095;26143;26194		48.346	16.04	1	12236000			43905	3893	21551	21642	50769;50770;50771	50769					-0.06651714216604887
YYASQTGFDY	10	Unmodified	_YYASQTGFDY_					0	0	0			REV__tr|A0A553SHQ7|A0A553SHQ7_NIACIGlucosedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_13440PE=4SV=1	REV__tr|A0A553SHQ7|A0A553SHQ7_NIACIGlucosedehydrogenaseOS=NialliacirculansOX=1397GN=CEQ21_13440PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	405.5067016482353	3	405.504866	1213.49277	3.0118	0.0012213	1.9356	0.00078491	4.9474	0.0020062	405.5057320221997	62.302	0.45235	64.259	64.061	64.514	1.9571					39	14	4	0	0	0	0.62631	2	26122	26122;26174		21.799	10.305	1	5309700	+		43906	14809	21552	21643	50772;50773	50772					-0.10543751761156273
YYDKHFTEF	9	Unmodified	_YYDKHFTEF_					0	0	0		nc|ENSG00000114573|P38606-2|ATP6V1A;ENSG00000114573|ENST00000273398|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	625.2824584841728	2	625.279846	1248.54514	0.6566	0.00041056	3.0172	0.0018866	3.6738	0.0022972	625.2822794598897	29.053	0.45531	30.335	30.069	30.524	1.2825					22	14	2	0	0	0	0.35391	1	12178	12178		22.736	6.8891	1	903760			43907	1871	21553	21644	50774	50774					-0.06919168627587169
YYDKHFTEF	9	Unmodified	_YYDKHFTEF_					0	0	0		nc|ENSG00000114573|P38606-2|ATP6V1A;ENSG00000114573|ENST00000273398|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	nc|ENSG00000114573|P38606-2|ATP6V1A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	625.2838012576103	2	625.279846	1248.54514	0.20457	0.00012792	2.932	0.0018334	3.1366	0.0019613	625.2823532576377	28.392	0.33419	30.167	30.031	30.365	1.7754					17	10	3	0	0	0	0.35391	1	11899	11899		22.736	12.662	1	1058700			43908	1871	21553	21644	50775	50775					-0.06919168627587169
YYDPKHVIF	9	Unmodified	_YYDPKHVIF_					0	0	0		ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3;ENSG00000161204|ENST00000429586|ABCF3	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	591.3030273318291	2	591.303124	1180.5917	0.24109	0.00014256	1.281	0.00075744	1.5221	0.0009	591.3031885094714	36.573	0.33337	37.849	37.717	38.05	1.2762					32	13	3	0	0	0	0.071837	2	15374	15332;15374		47.749	33.843	1	1337900			43909	3591	21554	21645	50776;50777	50777					0.008623159943681458
YYDPKHVIF	9	Unmodified	_YYDPKHVIF_					0	0	0		ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3;ENSG00000161204|ENST00000429586|ABCF3	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	591.3041259646416	2	591.303124	1180.5917	0.80831	0.00047796	0.44443	0.00026279	1.2527	0.00074075	591.3033619613717	36.02	0.30075	37.838	37.675	37.976	1.8176					21	13	2	0	0	0	0.060242	2	15089	15089;15128		43.858	33.034	1	2526800			43910	3591	21554	21645	50778;50779	50778					0.008623159943681458
YYDPKHVIF	9	Unmodified	_YYDPKHVIF_					0	0	0		ENST00000468892.5_1_3:183907488-183910505:+|nuORF;ENST00000473311.5_1_3:183906074-183911483:+|nuORF;nc|ENSG00000161204|Q9NUQ8-2|ABCF3;ENSG00000161204|ENST00000429586|ABCF3	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	ENST00000468892.5_1_3:183907488-183910505:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	394.8721496462822	3	394.537842	1180.5917	0.59964	0.00023658	-1.9483	-0.00076867	-1.3486	-0.00053209	394.5367814088622	36.056	0.33739	37.874	37.664	38.001	1.8176					40	15	3	0	0	0	0.18337	1	15109	15109		34.932	26.777	1	6778700			43911	3591	21554	21645	50780	50780					0.008623159943681458
YYDYNFINF	9	Unmodified	_YYDYNFINF_					0	0	0		ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	629.7773315310478	2	629.774396	1257.53424	2.5071	0.0015789	0.58123	0.00036604	3.0884	0.001945	629.7748059659366	78.824	0.40498	80.091	79.879	80.284	1.2668					35	12	4	0	0	0	0.083604	2	33078	33078;33130		54.774	35.197	1	3045500			43912	2721	21555	21646	50781;50782	50781					-0.08422571001869983
YYDYNFINF	9	Unmodified	_YYDYNFINF_					0	0	0		ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	ENSG00000136378|ENST00000388820|ADAMTS7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	629.7753784060478	2	629.774396	1257.53424	1.6622	0.0010468	1.1228	0.00070712	2.785	0.0017539	629.7747548373468	78.414	0.37345	80.149	79.915	80.289	1.735					29	11	3	0	0	0	0.091139	1	32857	32857		52.268	31.815	1	4873500			43913	2721	21555	21646	50783	50783					-0.08422571001869983
YYEHEFVEL	9	Unmodified	_YYEHEFVEL_					0	0	0		ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant;nc|ENSG00000166377|O43861-2|ATP9B;ENSG00000166377|ENST00000426216|ATP9B	ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant	ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	614.7802612185478	2	614.779679	1227.5448	1.4665	0.00090156	-0.73251	-0.00045033	0.73397	0.00045123	614.7787458159963	46.325	0.36917	47.7	47.493	47.862	1.3751					28	11	3	0	0	0	0.051699	2	19407	19361;19407		67.344	36.076	1	3434100			43914	93	21556	21647	50784;50785	50785					-0.05986588347423094
YYEHEFVEL	9	Unmodified	_YYEHEFVEL_					0	0	0		ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant;nc|ENSG00000166377|O43861-2|ATP9B;ENSG00000166377|ENST00000426216|ATP9B	ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant	ATP9B|p.V1071Sfs*19|1|0.59|ENSG00000166377|chr18:79374037-79374038|-/A|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	614.7797119021416	2	614.779679	1227.5448	1.177	0.00072358	0.018282	1.124E-05	1.1952	0.00073482	614.7793570191029	45.835	0.40413	47.805	47.599	48.003	1.9703					29	12	3	0	0	0	0.059546	2	19219	19172;19219		64.236	27.73	1	3163700			43915	93	21556	21647	50786;50787	50787					-0.05986588347423094
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825866580009	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.2941	1	3.396	2.896	3.896	0.10199								0	0	0	0.66264	1	1360	1360		0	0	1			+	43916	350	21557	21648	50788	50788					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825561404228	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	3.4917	1	3.5937	3.0937	4.0937	0.10199								0	0	0	0.66264	1	1442	1442		0	0	1			+	43917	350	21557	21648	50789	50789					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8831054568291	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.1408	1	4.2428	3.7428	4.7428	0.10199								0	0	0	0.66264	1	1710	1710		0	0	1			+	43918	350	21557	21648	50790	50790					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8826171755791	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.3084	1	4.4103	3.9103	4.9103	0.10199								0	0	0	0.66264	1	1780	1780		0	0	1			+	43919	350	21557	21648	50791	50791					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8821594119072	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.484	1	4.5721	4.0721	5.0721	0.08803								0	0	0	0.66264	1	1854	1854		0	0	1			+	43920	350	21557	21648	50792	50792					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8828307986259	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.5985	1	4.6865	4.1865	5.1865	0.08803								0	0	0	0.66264	1	1901	1901		0	0	1			+	43921	350	21557	21648	50793	50793					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825256228447	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	4.7025	1	4.7906	4.2906	5.2906	0.08803								0	0	0	0.66264	1	1943	1943		0	0	1			+	43922	350	21557	21648	50794	50794					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_A02_02	2	434.8825256228447	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.9982	1	9.0746	8.5746	9.5746	0.07632								0	0	0	0.66264	1	3727	3727		0	0	1			+	43923	350	21557	21648	50795	50795					-0.013567270243356688
YYESTRKENL	10	Unmodified	_YYESTRKENL_					0	0	0		ENSG00000143631|ENST00000368799|FLG;CON__P20930;FLG|p.K150Efs*4|1|0.06|ENSG00000143631|chr1:152314438-152314439|-/C|frameshift_variant;FLG|p.R261Sfs*11|1|0.04|ENSG00000143631|chr1:152314103-152314103|C/-|frameshift_variant;FLG|p.E286Tfs*19|1|0.31|ENSG00000143631|chr1:152314030-152314031|-/TCTGCGTGACGAGTGCCTGATTGTCTGGAGCTGT|frameshift_variant;FLG|p.S1260Pfs*186|1|0.06|ENSG00000143631|chr1:152311109-152311109|C/-|frameshift_variant;FLG|p.H1960Qfs*136|1|0.03|ENSG00000143631|chr1:152309006-152309007|-/CC|frameshift_variant;FLG|p.P2790Dfs*19|1|0.02|ENSG00000143631|chr1:152306518-152306519|-/GTGTC|frameshift_variant;FLG|p.Q2780Lfs*30|1|0.07|ENSG00000143631|chr1:152306547-152306548|-/GGGA|frameshift_variant	ENSG00000143631|ENST00000368799|FLG	ENSG00000143631|ENST00000368799|FLG	MSMS	GG20161007_CRH_Patient100_W632_02	4	434.8824645876884	3	434.882337	1301.62518	NaN	NaN	NaN	NaN	NaN	NaN	NaN	8.7868	1	9.5213	9.0213	10.021	0.73452								0	0	0	0.66264	1	3654	3654		0	0	1			+	43924	350	21557	21648	50796	50796					-0.013567270243356688
YYETRVIN	8	Unmodified	_YYETRVIN_					0	0	0			REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	353.1813537478447	3	353.181946	1056.52401	-0.84501	-0.00029844	1.5293	0.00054012	0.68429	0.00024168	353.1814660155632	81.483	0.41349	81.483	81.288	81.701	0					23	13	2	0	0	0	0.89008	1	33942	33942		1.6526	0	1	3354700	+		43925	9589	21558	21649	50797	50797					-0.0019913393639399146
YYETRVIN	8	Unmodified	_YYETRVIN_					0	0	0			REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	MULTI-MATCH	GG20161007_CRH_Patient100_A02_02	2		3	353.181946	1056.52401	1.7195	0.00060728	-1.1018	-0.00038912	0.6177	0.00021816	353.18019504020793	81.357	0.35979	81.648	81.462	81.822	0.29056	0.012481	-0.002745	NaN	1.6526	21	11	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2377600	+		43926	9589	21558	21649							-0.0019913393639399146
YYETRVIN	8	Unmodified	_YYETRVIN_					0	0	0			REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	REV__nc|ENSG00000121486|Q7Z2T5-2|TRMT1L	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		3	353.181946	1056.52401	1.3417	0.00047386	4.706	0.0016621	6.0477	0.0021359	353.5194480362617	80.524	0.39843	81.775	81.483	81.881	1.2512	0.13988	0.0034085	NaN	1.6526	16	12	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	992940	+		43927	9589	21558	21649							-0.0019913393639399146
YYEYNHDLF	9	Unmodified	_YYEYNHDLF_					0	0	0		ENSG00000151748|ENST00000324679|SAV1	ENSG00000151748|ENST00000324679|SAV1	ENSG00000151748|ENST00000324679|SAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.7706176638603	2	632.269478	1262.5244	1.6236	0.0010265	1.3406	0.0008476	2.9642	0.0018741	632.2704482883825	43.538	0.24519	44.892	44.765	45.01	1.3536					11	7	2	0	0	0	0.32838	1	18253	18253		24.021	11.489	1	626720			43928	3301	21559	21650	50798	50798					-0.09635759007255729
YYEYNHDLF	9	Unmodified	_YYEYNHDLF_					0	0	0		ENSG00000151748|ENST00000324679|SAV1	ENSG00000151748|ENST00000324679|SAV1	ENSG00000151748|ENST00000324679|SAV1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.2684203982353	2	632.269478	1262.5244	1.4287	0.0009033	-0.22517	-0.00014237	1.2035	0.00076093	632.2692338380933	42.961	0.23703	44.883	44.722	44.96	1.9211					14	7	2	0	0	0	0.25667	1	18020	18020		27.629	19.719	1	576860			43929	3301	21559	21650	50799	50799					-0.09635759007255729
YYEYPYYED	9	Unmodified	_YYEYPYYED_					0	0	0		COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant;COL5A1|p.E1571Rfs*53|1|0.06|ENSG00000130635|chr9:134823462-134823463|-/C|frameshift_variant;nc|ENSG00000130635|P20908-2|COL5A1;ENSG00000130635|ENST00000371817|COL5A1	COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	COL5A1|p.Q491Hfs*125|1|0.14|ENSG00000130635|chr9:134738786-134738787|-/C|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	327.0083495974541	4	326.880302	1303.4921	1.541	0.00050371	-2.8997	-0.00094786	-1.3588	-0.00044415	327.1291295034777	46.861	0.2822	48.837	48.717	48.999	1.976					12	8	2	0	0	0	0.11954	1	19674	19674		0.26902	0.1097	1	730280			43930	323	21560	21651	50800	50800					-0.14750591200913732
YYFDSYAHF	9	Unmodified	_YYFDSYAHF_					0	0	0		ENST00000261252.4_1_12:3649876-3661973:+|nuORF;ENST00000543701.5_1_12:3600779-3659332:+|nuORF;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-5|PRMT1;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;ENSG00000126457|ENST00000454376|PRMT1;nc|ENSG00000111218|Q9NR22-2|PRMT8;ENSG00000111218|ENST00000382622|PRMT8	ENST00000261252.4_1_12:3649876-3661973:+|nuORF	ENST00000261252.4_1_12:3649876-3661973:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	607.2549926638603	2	606.753464	1211.49238	1.8651	0.0011317	-1.6914	-0.0010263	0.17369	0.00010539	606.7523900678706	54.531	0.2617	56.499	56.348	56.61	1.9684					13	8	2	0	0	0	0.046276	1	22846	22846		70.716	58.184	1	1572100			43931	1730	21561	21652	50801	50801					-0.104911266903855
YYFDSYAHF	9	Unmodified	_YYFDSYAHF_					0	0	0		ENST00000261252.4_1_12:3649876-3661973:+|nuORF;ENST00000543701.5_1_12:3600779-3659332:+|nuORF;ENST00000525616.1_1_19:50180537-50188241:+|nuORF;nc|ENSG00000126457|Q99873-5|PRMT1;nc|ENSG00000126457|Q99873-2|PRMT1;nc|ENSG00000126457|Q99873-3|PRMT1;ENSG00000126457|ENST00000454376|PRMT1;nc|ENSG00000111218|Q9NR22-2|PRMT8;ENSG00000111218|ENST00000382622|PRMT8	ENST00000261252.4_1_12:3649876-3661973:+|nuORF	ENST00000261252.4_1_12:3649876-3661973:+|nuORF	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	606.753464	1211.49238	1.5243	0.0009249	-0.29608	-0.00017965	1.2283	0.00074526	606.7531856799271	54.94	0.28831	56.345	56.182	56.47	1.4048	-0.077213	0.00090144	NaN	70.716	16	9	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1454300			43932	1730	21561	21652							-0.104911266903855
YYFDYKEQL	9	Unmodified	_YYFDYKEQL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF;PSMD8|p.Q202Lfs*40|1|0.12|ENSG00000099341|chr19:38379307-38379308|-/TGGGCGACAGAGCA|frameshift_variant	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.7983886599541	2	634.795329	1267.5761	1.2397	0.00078697	2.5347	0.001609	3.7745	0.002396	634.797447379273	46.164	0.31447	47.539	47.398	47.712	1.3751					14	9	2	0	0	0	0.46566	1	19347	19347		17.113	9.2027	1	765170			43933	1209	21562	21653	50802	50802					-0.046980153133290514
YYFDYKEQL	9	Unmodified	_YYFDYKEQL_					0	0	0		ENSG00000099341|ENST00000215071|PSMD8;ENST00000592001.5_1_19:38865430-38871817:+|nuORF;PSMD8|p.Q202Lfs*40|1|0.12|ENSG00000099341|chr19:38379307-38379308|-/TGGGCGACAGAGCA|frameshift_variant	ENSG00000099341|ENST00000215071|PSMD8	ENSG00000099341|ENST00000215071|PSMD8	MULTI-MATCH	GG20161007_CRH_Patient100_W632_02	4		2	634.795329	1267.5761	0.93744	0.00059508	3.0737	0.0019511	4.0111	0.0025462	634.7966805143917	45.69	0.22208	47.661	47.567	47.789	1.9703	0.060871	0.00039016	NaN	17.113	12	6	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	575090			43934	1209	21562	21653							-0.046980153133290514
YYFEGIKQTF	10	Unmodified	_YYFEGIKQTF_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF;FRMD8-AHSA1|1|fusion	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	648.3199951052666	2	648.318971	1294.62339	0.76778	0.00049776	1.5609	0.001012	2.3287	0.0015097	648.3192127729453	52.306	0.46904	53.703	53.492	53.961	1.3966					49	14	5	0	0	0	3.5043E-14	3	21855	21855;21896;21935		222.22	174.47	1	28100000			43935	1290	21563	21654	50803;50804;50805	50803					-0.012137360423594146
YYFEGIKQTF	10	Unmodified	_YYFEGIKQTF_					0	0	0		ENSG00000100591|ENST00000216479|AHSA1;ENST00000556369.1_3_14:77935388-77935589:+|nuORF;FRMD8-AHSA1|1|fusion	ENSG00000100591|ENST00000216479|AHSA1	ENSG00000100591|ENST00000216479|AHSA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	648.3192016482353	2	648.318971	1294.62339	0.87514	0.00056737	1.3592	0.00088122	2.2344	0.0014486	648.3190121200328	51.713	0.49734	53.686	53.457	53.954	1.9722					49	15	5	0	0	0	3.5043E-14	4	21662	21619;21662;21701;21747		222.22	160.76	1	35874000			43936	1290	21563	21654	50806;50807;50808;50809	50807					-0.012137360423594146
YYFESMEVF	9	Unmodified	_YYFESMEVF_					0	0	0		ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	607.7566406130791	2	607.757358	1213.50016	2.8993	0.0017621	-2.2802	-0.0013858	0.61904	0.00037623	607.7560345140604	62.854	0.36375	64.267	64.075	64.439	1.4134					29	11	4	0	0	0	0.48482	1	26335	26335		16.942	1.0951	1	3475800			43937	5654	21564	21655	50810	50810					-0.09804735485136007
YYFESMEVF	9	Unmodified	_YYFESMEVF_					0	0	0		ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	405.5072814822197	3	405.507331	1213.50016	2.5952	0.0010524	-3.0568	-0.0012395	-0.46154	-0.00018716	405.5061241632871	62.826	0.42619	64.24	64.045	64.471	1.4134					34	13	3	0	0	0	0.48482	1	26365	26365		16.149	4.5177	1	7816500			43938	5654	21564	21655	50811	50811					-0.09804735485136007
YYFESMEVF	9	Unmodified	_YYFESMEVF_					0	0	0		ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	ENST00000265138.3_1_5:90665956-90666349:-|nuORF	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	405.507331	1213.50016	3.0118	0.0012213	-4.142	-0.0016796	-1.1302	-0.00045831	405.5057320221997	62.302	0.45235	64.259	64.061	64.514	1.9571	0.0097822	-0.00074536	NaN	16.149	39	14	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	5309700			43939	5654	21564	21655							-0.09804735485136007
YYFEVVQKL	9	Unmodified	_YYFEVVQKL_					0	0	0		ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	594.8221313357353	2	594.818607	1187.62266	1.3375	0.00079554	0.3119	0.00018552	1.6494	0.00098107	594.8192733955816	57.122	0.31808	58.536	58.4	58.718	1.4145					16	10	2	0	0	0	0.04812	2	23989	23939;23989		69.105	48.651	1	2129800			43940	1063	21565	21656	50812;50813	50813					0.036354693086195766
YYFEVVQKL	9	Unmodified	_YYFEVVQKL_					0	0	0		ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8189575076103	2	594.818607	1187.62266	0.98009	0.00058298	0.55685	0.00033122	1.5369	0.0009142	594.8188466531631	56.592	0.23664	58.56	58.425	58.662	1.9684					16	7	3	0	0	0	0.037098	1	23733	23733		78.728	53.329	1	2596800			43941	1063	21565	21656	50814	50814					0.036354693086195766
YYFEVVQKL	9	Unmodified	_YYFEVVQKL_					0	0	0		ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	ENSG00000085719|ENST00000517490|CPNE3	MSMS	GG20161007_CRH_Patient100_W632_02	4	594.8187133669853	2	594.818607	1187.62266	NaN	NaN	NaN	NaN	NaN	NaN	NaN	56.707	1	58.675	58.175	59.175	1.9684								0	0	0	0.29347	1	23787	23787		19.257	12.534	1				43942	1063	21565	21656	50815	50815					0.036354693086195766
YYFLSSLSF	9	Unmodified	_YYFLSSLSF_					0	0	0		ENST00000533406.2_1_11:124085485-124086391:+|nuORF;ENSG00000196341|ENST00000641015|OR8D1;nc|ENSG00000255425|P0DMU2|OR8G3P;ENSG00000197849|ENST00000641972|OR8G1;ENSG00000181518|ENST00000641687|OR8D4	ENST00000533406.2_1_11:124085485-124086391:+|nuORF	ENST00000533406.2_1_11:124085485-124086391:+|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	564.3195068240166	2	563.776408	1125.53826	5.9822	0.0033726	-3.2354	-0.0018241	2.7468	0.0015486	563.7744359669782	88.748	0.12995	89.804	89.723	89.853	1.0562					5	3	2	0	0	0	0.11463	1	37410	37410		7.9102	0	1	360180			43943	4578	21566	21657	50816	50816					-0.019484815081341367
YYFPVKNVI	9	Unmodified	_YYFPVKNVI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	571.8160888552666	2	571.815867	1141.61718	1.8915	0.0010816	-1.0965	-0.00062698	0.79508	0.00045464	571.8154369394905	56.963	0.27683	58.378	58.214	58.491	1.4145					18	8	3	0	0	0	0.1735	1	23859	23859		36.044	17.909	1	2281000			43944	4895	21567	21658	50817	50817					0.052037905167935605
YYFPVKNVI	9	Unmodified	_YYFPVKNVI_					0	0	0		ENSG00000189091|ENST00000302516|SF3B3;nc|ENSG00000189091|Q15393-3|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	ENSG00000189091|ENST00000302516|SF3B3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	571.8170043826103	2	571.815867	1141.61718	1.0881	0.00062221	0.021194	1.2119E-05	1.1093	0.00063433	571.8162614852429	56.41	0.27605	58.378	58.18	58.456	1.9684					13	8	2	0	0	0	0.087207	1	23638	23638		53.576	33.122	1	2519100			43945	4895	21567	21658	50818	50818					0.052037905167935605
YYFSKLIEF	9	Unmodified	_YYFSKLIEF_					0	0	0		ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	605.3148071169853	2	605.313158	1208.61176	2.6566	0.0016081	0.7834	0.0004742	3.44	0.0020823	605.3131406856858	72.387	0.42659	73.717	73.486	73.913	1.3297					32	13	3	0	0	0	0.034867	2	30361	30361;30414		80.676	49.408	1	4765200			43946	577	21568	21659	50819;50820	50819					0.01580066934320712
YYFSKLIEF	9	Unmodified	_YYFSKLIEF_					0	0	0		ENSG00000012660|ENST00000304434|ELOVL5;nc|ENSG00000012660|Q9NYP7-2|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	ENSG00000012660|ENST00000304434|ELOVL5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	605.3151122927666	2	605.313158	1208.61176	2.5387	0.0015367	1.3509	0.00081774	3.8897	0.0023545	605.3137973185792	71.923	0.36536	73.747	73.539	73.904	1.824					25	11	3	0	0	0	0.046715	1	30152	30152		70.332	37.546	1	4508300			43947	577	21568	21659	50821	50821					0.01580066934320712
YYGDVIWVI	9	Unmodified	_YYGDVIWVI_					0	0	0		ENSG00000196821|ENST00000374023|ILRUN;ENST00000453101.1_1_2:106961501-106961627:+|nuORF	ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1127.584277331829	1	1127.57717	1126.5699	3.9335	0.0044353	0.88917	0.0010026	4.8226	0.0054379	1127.5783507871097	90.5	0.28984	91.482	91.268	91.558	0.98156					11	8	2	0	0	0	0.069258	1	38109	38109		60.39	31.903	1	2563200			43948	4964	21569	21660	50822	50822					0.011675112458078729
YYGDVIWVI	9	Unmodified	_YYGDVIWVI_					0	0	0		ENSG00000196821|ENST00000374023|ILRUN;ENST00000453101.1_1_2:106961501-106961627:+|nuORF	ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1127.583666980267	1	1127.57717	1126.5699	4.0906	0.0046125	0.31273	0.00035263	4.4033	0.0049651	1127.5757776772427	89.967	0.37422	91.372	91.209	91.583	1.4044					19	11	2	0	0	0	0.069258	2	37886	37886;37950		60.39	37.653	1	2729800			43949	4964	21569	21660	50823;50824	50823					0.011675112458078729
YYGDVIWVI	9	Unmodified	_YYGDVIWVI_					0	0	0		ENSG00000196821|ENST00000374023|ILRUN;ENST00000453101.1_1_2:106961501-106961627:+|nuORF	ENSG00000196821|ENST00000374023|ILRUN	ENSG00000196821|ENST00000374023|ILRUN	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.2977172732353	2	564.292225	1126.5699	4.2025	0.0023715	1.9669	0.0011099	6.1694	0.0034814	564.2944149718201	90.011	0.40484	91.415	91.24	91.645	1.4045					17	12	2	0	0	0	0.34572	2	37890	37890;37936		23.148	15.238	1	1234800			43950	4964	21569	21660	50825;50826	50825					0.011675112458078729
YYGPLNLLTF	10	Unmodified	_YYGPLNLLTF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF;DEGS1|p.N255S|1|0.18|ENSG00000143753|chr1:224190258-224190258|A/G|missense_variant	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	600.8205444216728	2	600.818607	1199.62266	3.8091	0.0022886	-0.61314	-0.00036839	3.196	0.0019202	600.8182904729343	96.99	0.1939	97.274	97.134	97.328	0.28442					19	7	3	0	0	0	0.047918	2	40827	40788;40827		85.357	33.727	1	10898000			43951	3050	21570	21661	50827;50828	50828					0.03083469308603526
YYGPLNLLTF	10	Unmodified	_YYGPLNLLTF_					0	0	0		ENSG00000143753|ENST00000323699|DEGS1;ENST00000498813.1_1_1:224377853-224378832:+|nuORF;DEGS1|p.N255S|1|0.18|ENSG00000143753|chr1:224190258-224190258|A/G|missense_variant	ENSG00000143753|ENST00000323699|DEGS1	ENSG00000143753|ENST00000323699|DEGS1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.3229247927666	2	600.818607	1199.62266	3.3057	0.0019862	1.9652	0.0011807	5.271	0.0031669	600.8195685923088	96.874	0.28316	97.18	96.975	97.258	0.3062					17	8	3	0	0	0	0.06058	1	40728	40728		74.423	26.674	1	8531600			43952	3050	21570	21661	50829	50829					0.03083469308603526
YYGPLNWITF	10	Unmodified	_YYGPLNWITF_					0	0	0		ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	ENSG00000168350|ENST00000305631|DEGS2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	637.3166992068291	2	637.316232	1272.61791	3.3524	0.0021365	-1.4132	-0.00090065	1.9392	0.0012359	637.3150470164578	97.332	0.16794	97.616	97.478	97.646	0.28442					8	5	2	0	0	0	0.06639	1	40951	40951		104.8	66.624	1	4699000			43953	4030	21571	21662	50830	50830					-0.0074941483417205745
YYGRLFWEW	9	Unmodified	_YYGRLFWEW_					0	0	0		ENSG00000137200|ENST00000373451|CMTR1	ENSG00000137200|ENST00000373451|CMTR1	ENSG00000137200|ENST00000373451|CMTR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	660.3151122927666	2	660.314023	1318.61349	2.409	0.0015907	0.15861	0.00010473	2.5676	0.0016954	660.3137576911624	76.674	0.97743	77.968	77.731	78.708	1.2938					67	30	3	0	0	0	0.086433	2	32225	32225;32303		53.833	41.592	1	1528000			43954	2762	21572	21663	50831;50832	50831					-0.0330687925707025
YYGRLFWEW	9	Unmodified	_YYGRLFWEW_					0	0	0		ENSG00000137200|ENST00000373451|CMTR1	ENSG00000137200|ENST00000373451|CMTR1	ENSG00000137200|ENST00000373451|CMTR1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	660.3148071169853	2	660.314023	1318.61349	2.6152	0.0017268	-0.82206	-0.00054282	1.7931	0.001184	660.31344768903	76.008	0.94782	77.775	77.597	78.545	1.7672					45	29	3	0	0	0	0.12251	2	31950	31881;31950		41.84	29.599	1	1750600			43955	2762	21572	21663	50833;50834	50834					-0.0330687925707025
YYHEWLNRYRG	11	Unmodified	_YYHEWLNRYRG_					0	0	0			REV__ENSG00000113966|ENST00000463745|ARL6	REV__ENSG00000113966|ENST00000463745|ARL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	519.5845825076103	3	519.584625	1555.73205	0.8506	0.00044196	-1.1582	-0.00060177	-0.30758	-0.00015981	519.5843049139343	15.264	0.62152	15.264	15.061	15.682	0					69	19	6	0	0	0	1.0372	1	6302	6302		1.0136	0.088041	1	41450000	+		43956	9393	21573	21664	50835	50835					-0.023591320193645515
YYHEWLNRYRG	11	Unmodified	_YYHEWLNRYRG_					0	0	0			REV__ENSG00000113966|ENST00000463745|ARL6	REV__ENSG00000113966|ENST00000463745|ARL6	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	389.9397155642509	4	389.940288	1555.73205	-1.2071	-0.00047068	-0.18938	-7.3846E-05	-1.3964	-0.00054453	389.9402042887503	15.264	0.34408	15.264	15.092	15.436	0					31	10	4	0	0	0	0.9945	1	6326	6326		4.1166	1.8639	1	8144300	+		43957	9393	21573	21664	50836	50836					-0.023591320193645515
YYHLYKFH	8	Unmodified	_YYHLYKFH_					0	0	0			REV__ENSG00000111339|ENST00000228936|ART4	REV__ENSG00000111339|ENST00000228936|ART4	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	391.2843200564384	3	390.862548	1169.56581	0.17793	6.9546E-05	3.0022	0.0011735	3.1802	0.001243	390.8639789825627	19.005	0.31006	20.529	20.471	20.781	1.5237					11	9	2	0	0	0	2.3239	1	7963	7963		1.8442	0	1	167690	+		43958	9325	21574	21665	50837	50837					-0.012185334572450301
YYHQYLKYL	9	Unmodified	_YYHQYLKYL_					0	0	0			REV__ENSG00000182544|ENST00000329548|MFSD5	REV__ENSG00000182544|ENST00000329548|MFSD5	MSMS	GG20161007_CRH_Patient100_W632_01	3	430.8896972537041	3	430.888763	1289.64446	NaN	NaN	NaN	NaN	NaN	NaN	NaN	93.461	1	94.333	93.833	94.833	0.87176								0	0	0	0.42693	1	39333	39333		0.26902	0	1		+		43959	11354	21575	21666	50838	50838					0.011222740571838585
YYHWEKDCI	9	Unmodified	_YYHWEKDCI_					0	0	0			REV__ENSG00000158258|ENST00000458420|CLSTN2	REV__ENSG00000158258|ENST00000458420|CLSTN2	MSMS	GG20161007_CRH_Patient100_W632_02	4	629.1585571169853	2	628.773874	1255.53319	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.138	1	83.808	83.308	84.308	1.67								0	0	0	0.42693	1	34457	34457		2.3027	0.24298	1		+		43960	10552	21576	21667	50839	50839					-0.08435108642402156
YYIEGIENSVF	11	Unmodified	_YYIEGIENSVF_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	667.3209106326103	2	667.319168	1332.62378	3.2842	0.0021916	-1.5561	-0.0010384	1.7281	0.0011532	667.3183429594978	72.955	0.37444	74.284	74.069	74.443	1.3298					28	11	3	0	0	0	0.037135	1	30612	30612		72.968	46.7	1	2879100			43961	5034	21577	21668	50840	50840					-0.029223611131556027
YYIEGIENSVF	11	Unmodified	_YYIEGIENSVF_					0	0	0		nc|ENSG00000197969|Q96RL7-4|VPS13A;nc|ENSG00000197969|Q96RL7-2|VPS13A;nc|ENSG00000197969|Q96RL7-3|VPS13A;ENSG00000197969|ENST00000360280|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	nc|ENSG00000197969|Q96RL7-4|VPS13A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	667.3206664919853	2	667.319168	1332.62378	2.4534	0.0016372	-1.0946	-0.00073048	1.3588	0.00090674	667.3187811800756	72.527	0.34307	74.337	74.137	74.48	1.8101					26	10	3	0	0	0	0.037135	2	30452	30402;30452		72.968	46.7	1	3271500			43962	5034	21577	21668	50841;50842	50842					-0.029223611131556027
YYIFIPSKF	9	Unmodified	_YYIFIPSKF_					0	0	0		ENST00000541537.5_1_12:12966301-12977638:+|nuORF;ENSG00000213782|ENST00000358007|DDX47;ENST00000542123.5_1_12:12966301-12976268:+|nuORF;ENST00000545038.5_1_12:12966301-12976268:+|nuORF;nc|ENSG00000213782|Q9H0S4-2|DDX47	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	589.3196899294853	2	589.318243	1176.62193	2.27	0.0013378	-0.55744	-0.00032851	1.7126	0.0010093	589.3181762111868	69.438	0.641	70.804	70.614	71.255	1.3657					67	20	5	0	0	0	0.024001	3	29199	29109;29160;29199		96.111	73.375	1	125490000			43963	5229	21578	21669	50843;50844;50845	50845					0.04068674659561111
YYIFIPSKF	9	Unmodified	_YYIFIPSKF_					0	0	0		ENST00000541537.5_1_12:12966301-12977638:+|nuORF;ENSG00000213782|ENST00000358007|DDX47;ENST00000542123.5_1_12:12966301-12976268:+|nuORF;ENST00000545038.5_1_12:12966301-12976268:+|nuORF;nc|ENSG00000213782|Q9H0S4-2|DDX47	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	ENST00000541537.5_1_12:12966301-12977638:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	589.3187133669853	2	589.318243	1176.62193	1.3066	0.00076998	-0.26704	-0.00015737	1.0395	0.00061261	589.3182851441131	68.871	0.75949	70.724	70.439	71.199	1.853					80	24	5	0	0	0	0.010279	4	28938	28852;28898;28938;28995		107.19	59.438	1	101310000			43964	5229	21578	21669	50846;50847;50848;50849	50848					0.04068674659561111
YYIFKRFLFFL	11	Unmodified	_YYIFKRFLFFL_					0	0	0		ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENST00000544151.1_1_12:21807353-21810687:-|nuORF	ENST00000544151.1_1_12:21807353-21810687:-|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	779.2405883669853	2	778.936848	1555.85914	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.996	1	99.194	98.694	99.694	0.19767								0	0	0	0.63775	1	41677	41677		1.4819	0.15237	1				43965	7227	21579	21670	50850	50850					0.10344820872910532
YYILKVKSLFP	11	Unmodified	_YYILKVKSLFP_					0	0	0			REV__ENSG00000253710|ENST00000521508|ALG11	REV__ENSG00000253710|ENST00000521508|ALG11	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	685.9100829958916	2	685.907756	1369.80096	2.2313	0.0015305	1.4785	0.0010141	3.7098	0.0025446	685.9088979398654	82.982	1.3835	83.252	82.573	83.956	0.27029					122	44	3	0	0	0	1.0362	1	34780	34780		1.3295	0.13619	1	1896900	+		43966	11958	21580	21671	50851	50851					0.13085139227655418
YYITGNLETF	10	Unmodified	_YYITGNLETF_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	610.7977172732353	2	610.795329	1219.5761	2.7769	0.0016961	-0.012668	-7.7379E-06	2.7643	0.0016884	610.7951313168162	63.976	0.24959	65.904	65.795	66.045	1.928					12	7	2	0	0	0	0.77604	1	26853	26853		14.838	6.0929	1	1676100			43967	1151	21581	21672	50852	50852					-0.024900153133330605
YYITGNLETF	10	Unmodified	_YYITGNLETF_					0	0	0		nc|ENSG00000091490|Q68CR1-3|SEL1L3;nc|ENSG00000091490|Q68CR1-2|SEL1L3;ENSG00000091490|ENST00000399878|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	nc|ENSG00000091490|Q68CR1-3|SEL1L3	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	610.795329	1219.5761	3.0689	0.0018745	0.22584	0.00013794	3.2948	0.0020124	610.7955150139121	64.5	0.24566	65.907	65.77	66.016	1.4071	0.0014076	0.00011146	NaN	14.838	13	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1120900			43968	1151	21581	21672							-0.024900153133330605
YYITLIML	8	Oxidation (M)	_YYITLIM(Oxidation (M))L_		YYITLIM(1)L		YYITLIM(60)L	0	0	1		ENSG00000197147|ENST00000330947|LRRC8B	ENSG00000197147|ENST00000330947|LRRC8B	ENSG00000197147|ENST00000330947|LRRC8B	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1045.569873034954	1	1045.56383	1044.55656	3.2021	0.003348	2.3182	0.0024238	5.5204	0.0057719	1045.5667192695546	74.288	0.51163	75.606	75.405	75.917	1.318					47	16	4	0	0	0	0.37329	1	31176	31176		59.795	7.5269	1	11690000			43969	4984	21582	21673	50853	50853		86			0.03605937142219773
YYKDILPCL	9	Unmodified	_YYKDILPCL_					0	0	0		PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant;PRKDC|p.P3973Afs*40|1|0.09|ENSG00000253729|chr8:47777811-47777812|-/C|frameshift_variant;nc|ENSG00000253729|P78527-2|PRKDC;ENSG00000253729|ENST00000314191|PRKDC;PRKDC|p.K2221Nfs*18|1|0.7|ENSG00000253729|chr8:47855320-47855320|T/-|frameshift_variant;PRKDC|p.E932Nfs*48|1|0.03|ENSG00000253729|chr8:47912550-47912550|C/-|frameshift_variant;ENST00000541488.1_1_8:48839745-48841720:-|nuORF	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	PRKDC|p.M3609Ifs*3|1|0.41|ENSG00000253729|chr8:47788981-47788982|-/T|frameshift_variant	MSMS	GG20161007_CRH_Patient100_W632_01	3	564.2954589724541	2	564.293911	1126.57327	NaN	NaN	NaN	NaN	NaN	NaN	NaN	90.479	1	91.461	90.961	91.961	0.98157								0	0	0	0.32813	1	38120	38120		15.847	4.7327	1				43970	5388	21583	21674	50854	50854					0.01504438028155164
YYKIVSPILR	10	Unmodified	_YYKIVSPILR_					0	0	0		ENSG00000237521|ENST00000456448|OR7E24	ENSG00000237521|ENST00000456448|OR7E24	ENSG00000237521|ENST00000456448|OR7E24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	417.9209472537041	3	417.920174	1250.73869	0.30478	0.00012737	3.3325	0.0013927	3.6373	0.0015201	417.92121231746313	31.093	0.63732	31.093	30.928	31.565	0					68	20	4	0	0	0	0.88579	1	13125	13125		1.4551	0	1	7414100			43971	5325	21584	21675	50855	50855					0.123354128793153
YYKIVSPILR	10	Unmodified	_YYKIVSPILR_					0	0	0		ENSG00000237521|ENST00000456448|OR7E24	ENSG00000237521|ENST00000456448|OR7E24	ENSG00000237521|ENST00000456448|OR7E24	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	417.9211303591728	3	417.920174	1250.73869	1.4069	0.00058797	1.7511	0.00073182	3.158	0.0013198	417.92082682335234	30.375	0.70564	30.661	30.501	31.206	0.2859					76	23	4	0	0	0	0.88579	1	12833	12833		1.4551	0	1	6090000			43972	5325	21584	21675	50856	50856					0.123354128793153
YYKKILSL	8	Unmodified	_YYKKILSL_					0	0	0		nc|ENSG00000103599|Q86VS3-4|IQCH;nc|ENSG00000103599|Q86VS3-2|IQCH;ENSG00000103599|ENST00000335894|IQCH	nc|ENSG00000103599|Q86VS3-4|IQCH	nc|ENSG00000103599|Q86VS3-4|IQCH	MSMS	GG20161007_CRH_Patient100_A02_02	2	343.2122680544853	3	343.211066	1026.61137	NaN	NaN	NaN	NaN	NaN	NaN	NaN	100.96	1	101.03	100.53	101.53	0.067009								0	0	0	1.0178	1	42268	42268		0.45834	0	1				43973	1437	21585	21676	50857	50857					0.09912692005150348
YYKLVKRSENL	11	Unmodified	_YYKLVKRSENL_					0	0	0			REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	471.9365417361259	3	471.601393	1411.78235	1.0058	0.00047436	0.098401	4.6406E-05	1.1042	0.00052076	471.6012166922378	14.147	0.28095	14.26	14.135	14.416	0.11295					24	8	4	0	0	0	0.94496	2	5848	5848;5897		5.8681	2.2755	1	2337600	+		43974	14871	21586	21677	50858;50859	50858					0.09292977585801054
YYKLVKRSENL	11	Unmodified	_YYKLVKRSENL_					0	0	0			REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	MULTI-SECPEP	GG20161007_CRH_Patient100_A02_02	2	471.9365417361259	3	471.601393	1411.78235	1.0058	0.00047436	0.098401	4.6406E-05	1.1042	0.00052076	471.6012166922378	14.147	0.28095	14.26	14.135	14.416	0.11295					24	8	4	0	0	0	0.14606	1	5848	5848		5.8681	1.462	1	2337600	+		43975	14871	21586	21677	50860	50860					0.09292977585801054
YYKLVKRSENL	11	Unmodified	_YYKLVKRSENL_					0	0	0			REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	REV__tr|A0A553SIX3|A0A553SIX3_NIACIBhproteinOS=NialliacirculansOX=1397GN=CEQ21_15670PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.6009704470634	3	471.601393	1411.78235	0.50019	0.00023589	-0.30894	-0.0001457	0.19124	9.0189E-05	471.6012551541293	13.524	0.28798	14.352	14.197	14.485	0.82788					27	9	4	0	0	0	0.94496	1	5641	5641		5.8681	1.7515	1	2416000	+		43976	14871	21586	21677	50861	50861					0.09292977585801054
YYKSIHTGEK	10	Unmodified	_YYKSIHTGEK_					0	0	0		ENSG00000196109|ENST00000397121|ZNF676	ENSG00000196109|ENST00000397121|ZNF676	ENSG00000196109|ENST00000397121|ZNF676	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	613.3125488162041	2	613.31422	1224.61389	0.15207	9.3267E-05	-2.7547	-0.0016895	-2.6027	-0.0015963	613.3124656228277	15.309	0.23396	16.206	16.082	16.315	0.89664					18	7	3	0	0	0	0.53402	1	6336	6336		26.021	3.3626	1	2592300			43977	4913	21587	21678	50862	50862					0.010564956721282215
YYLAQLKTRKE	11	Unmodified	_YYLAQLKTRKE_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	471.6018554568291	3	471.601393	1411.78235	0.13214	6.2315E-05	0.39719	0.00018732	0.52933	0.00024963	471.6015501955707	13.7	0.24846	14.426	14.286	14.535	0.72639					22	7	4	0	0	0	0.88359	1	5669	5669		5.8681	1.7515	1	3306000	+		43978	14271	21588	21679	50863	50863					0.09292977585778317
YYLAQLKTRKE	11	Unmodified	_YYLAQLKTRKE_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	471.6013366580009	3	471.601393	1411.78235	0.50019	0.00023589	-0.30894	-0.0001457	0.19124	9.0189E-05	471.6012551541293	13.524	0.28798	14.352	14.197	14.485	0.82788					27	9	4	0	0	0	0.94496	1	5592	5592		3.5927	0	1	2416000	+		43979	14271	21588	21679	50864	50864					0.09292977585778317
YYLAQLKTRKE	11	Unmodified	_YYLAQLKTRKE_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_01	3		3	471.601393	1411.78235	0.13214	6.2315E-05	0.39719	0.00018732	0.52933	0.00024963	471.6015501955707	13.7	0.24846	14.426	14.286	14.535	0.72639	0.080311	0.00048858	NaN	5.8681	22	7	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	3306000	+		43980	14271	21588	21679							0.09292977585778317
YYLAQLKTRKE	11	Unmodified	_YYLAQLKTRKE_					0	0	0			REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	REV__L1MA6_dup4553|chr14:32965001-32966588:+|1.0811544242595916|0.0860524180403581|3.65|423.0|50|3|sense	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_W632_02	4		3	471.601393	1411.78235	0.50019	0.00023589	-0.30894	-0.0001457	0.19124	9.0189E-05	471.6012551541293	13.524	0.28798	14.352	14.197	14.485	0.82788	0.0061428	-0.00051046	NaN	5.8681	27	9	4	NaN	NaN	NaN	NaN	0				NaN	NaN	0	2416000	+		43981	14271	21588	21679							0.09292977585778317
YYLGKILEM	9	Unmodified	_YYLGKILEM_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	565.3032714724541	2	565.301736	1128.58892	2.9414	0.0016628	0.87229	0.00049311	3.8137	0.0021559	565.3027017180458	61.994	0.47472	63.411	63.113	63.588	1.4177					32	14	3	0	0	0	0.11669	1	25967	25967		43.772	24.515	1	2686500			43982	3300	21589	21680	50865	50865					0.029767245452148927
YYLGKILEM	9	Unmodified	_YYLGKILEM_					0	0	0		nc|ENSG00000151746|Q96G01-4|BICD1;nc|ENSG00000151746|Q96G01-3|BICD1;ENSG00000151746|ENST00000652176|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	nc|ENSG00000151746|Q96G01-4|BICD1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	565.3031494021416	2	565.301736	1128.58892	2.1859	0.0012357	1.5763	0.00089108	3.7622	0.0021268	565.3028842389418	61.332	0.44299	63.289	63.119	63.562	1.9571					27	13	3	0	0	0	0.18809	1	25755	25755		34.402	20.496	1	2812500			43983	3300	21589	21680	50866	50866					0.029767245452148927
YYLIIRQH	8	Unmodified	_YYLIIRQH_					0	0	0			REV__ENST00000471477.1_1_9:101706343-101748400:+|nuORF	REV__ENST00000471477.1_1_9:101706343-101748400:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	553.3143188357353	2	553.311284	1104.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.17	1	108.32	107.82	108.82	0.15781								0	0	0	1.0178	1	46698	46698		0.69038	0	1		+		43984	11776	21590	21681	50867	50867					0.05989441951146546
YYLIIRQH	8	Unmodified	_YYLIIRQH_					0	0	0			REV__ENST00000471477.1_1_9:101706343-101748400:+|nuORF	REV__ENST00000471477.1_1_9:101706343-101748400:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_02	4	553.3130370974541	2	553.311284	1104.60801	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.12	1	108.27	107.77	108.77	0.15795								0	0	0	1.0178	1	46608	46608		0.69038	0	1		+		43985	11776	21590	21681	50868	50868					0.05989441951146546
YYLIKPPVL	9	Unmodified	_YYLIKPPVL_					0	0	0		tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	553.3388549685478	2	553.336436	1104.65832	2.1598	0.0011951	2.5572	0.001415	4.717	0.0026101	553.3375666305565	82.392	0.276	82.672	82.52	82.796	0.2802					14	8	2	0	0	0	0.84963	1	34456	34456		0.6015	0.076735	1	721400			43986	16186	21591	21682	50869	50869					0.11017551556278704
YYLIKPPVL	9	Unmodified	_YYLIKPPVL_					0	0	0		tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	MULTI-MATCH-MSMS	GG20161007_CRH_Patient100_A02_01	1		2	553.336436	1104.65832	1.7265	0.00095532	2.6052	0.0014416	4.3317	0.0023969	553.3386017736925	82.57	0.33698	82.57	82.4	82.737	0	-0.098577	0.00020412	NaN	0.6015	13	10	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	1191500			43987	16186	21591	21682							0.11017551556278704
YYLIKPPVL	9	Unmodified	_YYLIKPPVL_					0	0	0		tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	tr|A0A553SIB5|A0A553SIB5_NIACIExonucleaseOS=NialliacirculansOX=1397GN=CEQ21_14560PE=4SV=1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	553.336436	1104.65832	3.3341	0.0018449	2.1024	0.0011634	5.4366	0.0030083	553.337917866197	81.531	0.24762	82.764	82.656	82.904	1.2332	0.095287	-0.00035229	NaN	0.6015	11	7	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	331340			43988	16186	21591	21682							0.11017551556278704
YYLNDLERI	9	Unmodified	_YYLNDLERI_					0	0	0		GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant;nc|ENSG00000114353|P04899-6|GNAI2;ENST00000490122.5_1_3:50289817-50295119:+|nuORF;nc|ENSG00000114353|P04899-3|GNAI2;nc|ENSG00000114353|P04899-5|GNAI2;nc|ENSG00000114353|P04899-2|GNAI2;ENSG00000128266|ENST00000615612|GNAZ;ENSG00000114353|ENST00000313601|GNAI2;nc|ENSG00000114353|P04899-4|GNAI2;MRPS27-GNAI2|1|fusion	GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant	GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.8085815310478	2	599.808771	1197.60299	0.9043	0.00054241	-0.54821	-0.00032882	0.35609	0.00021359	599.8083677047789	52.74	0.44507	54.137	53.93	54.375	1.3971					32	13	3	0	0	0	0.024001	2	22093	22047;22093		96.111	43.843	1	7694300			43989	1859	21592	21683	50870;50871	50871					0.01209093297848085
YYLNDLERI	9	Unmodified	_YYLNDLERI_					0	0	0		GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant;nc|ENSG00000114353|P04899-6|GNAI2;ENST00000490122.5_1_3:50289817-50295119:+|nuORF;nc|ENSG00000114353|P04899-3|GNAI2;nc|ENSG00000114353|P04899-5|GNAI2;nc|ENSG00000114353|P04899-2|GNAI2;ENSG00000128266|ENST00000615612|GNAZ;ENSG00000114353|ENST00000313601|GNAI2;nc|ENSG00000114353|P04899-4|GNAI2;MRPS27-GNAI2|1|fusion	GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant	GNAI2|p.D273Pfs*3|1|0.15|ENSG00000114353|chr3:50257030-50257031|GA/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	600.3099853396416	2	599.808771	1197.60299	1.4364	0.00086154	-0.88476	-0.00053069	0.5516	0.00033085	599.80803947065	52.172	0.39709	54.144	53.923	54.32	1.9722					31	12	3	0	0	0	0.031145	1	21883	21883		85.642	35.709	1	5286600			43990	1859	21592	21683	50872	50872					0.01209093297848085
YYLNEIQSF	9	Unmodified	_YYLNEIQSF_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.7837402224541	2	588.782222	1175.54989	2.9821	0.0017558	-0.96685	-0.00056926	2.0153	0.0011865	588.7824132994849	62.885	0.60864	64.299	63.987	64.596	1.4134					47	19	5	0	0	0	0.0044745	3	26338	26301;26338;26390		123.45	34.497	1	104400000			43991	3553	21593	21684	50873;50874;50875	50874					-0.030862844848115856
YYLNEIQSF	9	Unmodified	_YYLNEIQSF_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1176.559619128704	1	1176.55717	1175.54989	2.5579	0.0030096	0.45564	0.00053608	3.0136	0.0035456	1176.5574493529487	62.856	0.36375	64.269	64.075	64.439	1.4134					35	11	4	0	0	0	0.023786	2	26332	26332;26382		96.285	17.557	1	4229400			43992	3553	21593	21684	50876;50877	50876					-0.030862844848115856
YYLNEIQSF	9	Unmodified	_YYLNEIQSF_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.7830078005791	2	588.782222	1175.54989	3.1237	0.0018392	-2.1392	-0.0012595	0.98457	0.0005797	588.7818089804844	62.306	0.60889	64.264	63.968	64.577	1.9571					51	19	5	0	0	0	0.026628	3	26104	26104;26154;26193		92.822	17.893	1	78715000			43993	3553	21593	21684	50878;50879;50880	50878					-0.030862844848115856
YYLNEIQSF	9	Unmodified	_YYLNEIQSF_					0	0	0		nc|ENSG00000160284|Q9H0A9-2|SPATC1L;RAB40C-C21orf56|1|fusion;ENSG00000160284|ENST00000291672|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	nc|ENSG00000160284|Q9H0A9-2|SPATC1L	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1176.559985339642	1	1176.55717	1175.54989	2.6203	0.0030829	-0.07305	-8.5947E-05	2.5473	0.002997	1176.5569355120829	62.343	0.35966	64.3	64.091	64.451	1.9571					28	11	3	0	0	0	0.031377	2	26159	26113;26159		85.272	16.167	1	3964000			43994	3553	21593	21684	50881;50882	50882					-0.030862844848115856
YYLNNKVYHIE	11	Unmodified	_YYLNNKVYHIE_					0	0	0		tr|A0A7D6W2K1|A0A7D6W2K1_9CLOTTransglutaminasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06570PE=4SV=1	tr|A0A7D6W2K1|A0A7D6W2K1_9CLOTTransglutaminasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06570PE=4SV=1	tr|A0A7D6W2K1|A0A7D6W2K1_9CLOTTransglutaminasedomain-containingproteinOS=ClostridiumintestinaleOX=36845GN=HZF06_06570PE=4SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	728.3663207888603	2	728.366984	1454.71942	1.3155	0.00095816	-2.8997	-0.0021121	-1.5842	-0.0011539	728.365212053411	27.347	0.36284	27.347	27.169	27.532	0					34	11	4	0	0	0	0.61014	1	11451	11451		26.268	1.2772	1	4901800			43995	17035	21594	21685	50883	50883					0.01024411797789071
YYLPQHLS	8	Unmodified	_YYLPQHLS_					0	0	0			REV__ENSG00000188691|ENST00000532411|OR56A5	REV__ENSG00000188691|ENST00000532411|OR56A5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	510.7587768435478	2	510.761092	1019.50763	2.8241	0.0014424	3.1987	0.0016338	6.0228	0.0030762	510.7612800723822	75.938	1.1847	77.232	76.361	77.546	1.2938					71	38	4	0	0	0	0.87065	1	31663	31663		14.838	0	1	6728500	+		43996	11308	21595	21686	50884	50884					-0.0013421510251419022
YYLSYIEEW	9	Unmodified	_YYLSYIEEW_					0	0	0		NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214;ENST00000525561.1_1_9:134008494-134010392:+|nuORF	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	633.3733398318291	2	633.289879	1264.56521	2.4376	0.0015437	1.1088	0.00070217	3.5464	0.0022459	633.2902639338831	79.473	0.28048	80.724	80.582	80.863	1.2512					19	8	3	0	0	0	0.11333	1	33303	33303		13.508	0	1	2009800			43997	2323	21596	21687	50885	50885					-0.05649417687618552
YYLSYIEEW	9	Unmodified	_YYLSYIEEW_					0	0	0		NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant;nc|ENSG00000126883|P35658-2|NUP214;nc|ENSG00000126883|P35658-4|NUP214;ENSG00000126883|ENST00000359428|NUP214;nc|ENSG00000126883|P35658-3|NUP214;nc|ENSG00000126883|P35658-5|NUP214;ENST00000525561.1_1_9:134008494-134010392:+|nuORF	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	NUP214|p.A1512Sfs*24|1|0.04|ENSG00000126883|chr9:131198026-131198027|-/T|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	633.2950317263603	2	633.289879	1264.56521	1.5608	0.00098847	3.8804	0.0024574	5.4412	0.0034459	633.2918397245978	79.034	0.21548	80.769	80.598	80.814	1.735					12	6	2	0	0	0	0.15478	1	33154	33154		38.151	23.313	1	2827100			43998	2323	21596	21687	50886	50886					-0.05649417687618552
YYLTFVQEL	9	Unmodified	_YYLTFVQEL_					0	0	0		nc|ENSG00000147130|Q14202-2|ZMYM3;ENSG00000147130|ENST00000314425|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	588.3041869997978	2	588.30279	1174.59103	3.563	0.0020961	1.5212	0.00089496	5.0842	0.0029911	588.3032104234944	82.437	0.32034	83.649	83.537	83.858	1.2125					16	9	2	0	0	0	0.046276	1	34636	34636		70.716	43.832	1	2874500			43999	3171	21597	21688	50887	50887					0.010714765546708804
YYLTFVQEL	9	Unmodified	_YYLTFVQEL_					0	0	0		nc|ENSG00000147130|Q14202-2|ZMYM3;ENSG00000147130|ENST00000314425|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	nc|ENSG00000147130|Q14202-2|ZMYM3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	588.3052245974541	2	588.30279	1174.59103	3.6328	0.0021372	2.0377	0.0011988	5.6704	0.0033359	588.303234426713	82.048	0.25555	83.719	83.575	83.831	1.67					14	7	2	0	0	0	0.11478	1	34401	34401		44.407	20.386	1	1308900			44000	3171	21597	21688	50888	50888					0.010714765546708804
YYLVSYLLF	9	Unmodified	_YYLVSYLLF_					0	0	0		tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	590.8213989138603	2	590.818076	1179.6216	3.1628	0.0018686	1.3672	0.00080779	4.53	0.0026764	590.8192292396777	74.832	0.55495	76.138	75.756	76.311	1.3063					37	17	4	0	0	0	0.22519	2	31371	31371;31426		30.225	6.2042	1	4940000			44001	16611	21598	21689	50889;50890	50889					0.038972549396930845
YYLVSYLLF	9	Unmodified	_YYLVSYLLF_					0	0	0		tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	tr|A0A553SSF9|A0A553SSF9_NIACIMFStransporterOS=NialliacirculansOX=1397GN=CEQ21_03005PE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	590.8210937380791	2	590.818076	1179.6216	2.9581	0.0017477	2.4183	0.0014288	5.3765	0.0031765	590.8208734334465	74.376	0.68945	76.173	75.838	76.527	1.7962					40	21	3	0	0	0	0.1735	1	31178	31178		36.044	5.4077	1	3824400			44002	16611	21598	21689	50891	50891					0.038972549396930845
YYLYCQVHF	9	Unmodified	_YYLYCQVHF_					0	0	0		ENSG00000239697|ENST00000293825|TNFSF12	ENSG00000239697|ENST00000293825|TNFSF12	ENSG00000239697|ENST00000293825|TNFSF12	MSMS	GG20161007_CRH_Patient100_W632_01	3	412.5234863162041	3	412.523315	1234.54812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.966	1	32.248	31.748	32.748	1.2818								0	0	0	0.42693	1	12994	12994		1.1933	0	1				44003	5327	21599	21690	50892	50892					-0.05977616774407579
YYLYCQVHF	9	Unmodified	_YYLYCQVHF_					0	0	0		ENSG00000239697|ENST00000293825|TNFSF12	ENSG00000239697|ENST00000293825|TNFSF12	ENSG00000239697|ENST00000293825|TNFSF12	MSMS	GG20161007_CRH_Patient100_W632_02	4	412.5239135622978	3	412.523315	1234.54812	NaN	NaN	NaN	NaN	NaN	NaN	NaN	30.448	1	32.263	31.763	32.763	1.8151								0	0	0	0.42693	1	12764	12764		1.1933	0	1				44004	5327	21599	21690	50893	50893					-0.05977616774407579
YYMKDLPTSF	10	Unmodified	_YYMKDLPTSF_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	632.7989990115166	2	632.799557	1263.58456	0.57101	0.00036134	-1.2181	-0.00077079	-0.64705	-0.00040945	632.7990156564766	51.685	0.3175	53.082	52.919	53.237	1.3966					23	10	3	0	0	0	0.052432	2	21626	21626;21672		110.79	59.163	1	3847900			44005	5341	21600	21691	50894;50895	50894					-0.03668784668366243
YYMKDLPTSF	10	Unmodified	_YYMKDLPTSF_					0	0	0		ENSG00000241973|ENST00000255882|PI4KA;ENST00000485963.5_1_22:21152870-21213097:-|nuORF	ENSG00000241973|ENST00000255882|PI4KA	ENSG00000241973|ENST00000255882|PI4KA	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	632.7995483279228	2	632.799557	1263.58456	-0.6359	-0.0004024	-0.80122	-0.00050701	-1.4371	-0.00090941	632.7994261620304	51.15	0.27071	53.125	52.942	53.213	1.9753					23	10	3	0	0	0	0.065676	2	21396	21396;21439		135.86	66.759	1	6088800			44006	5341	21600	21691	50896;50897	50896					-0.03668784668366243
YYMNNYQFI	9	Unmodified	_YYMNNYQFI_					0	0	0		Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|75|2|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|75|2|sense	Harlequin-int_dup415|chr13:22885843-22889378:+|5.118798177365826|0.2933300422967718|4.13|425.0|75|2|sense	MSMS	GG20161007_CRH_Patient100_W632_02	4	628.2761108279228	2	628.276249	1254.53795	NaN	NaN	NaN	NaN	NaN	NaN	NaN	82.298	1	83.968	83.468	84.468	1.67								0	0	0	0.39421	1	34524	34524		9.3474	4.0506	1				44007	7614	21601	21692	50898	50898					-0.07914224499654665
YYNGMVVFW	9	Oxidation (M)	_YYNGM(Oxidation (M))VVFW_		YYNGM(1)VVFW		YYNGM(44)VVFW	0	0	1		ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	ENSG00000115207|ENST00000264720|GTF3C2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.7680541872978	2	597.76806	1193.52157	1.8482	0.0011048	-1.4737	-0.00088091	0.3745	0.00022386	597.7669220377652	71.856	0.71817	73.198	72.905	73.624	1.3415					36	22	2	0	0	0	0.11478	1	30219	30219		44.407	29.159	1	1730400			44008	1902	21602	21693	50899	50899		36			-0.06745305665731394
YYNIKNLRNEE	11	Unmodified	_YYNIKNLRNEE_					0	0	0		ENST00000513216.5_3_4:68338325-68358532:-|nuORF;ENSG00000145241|ENST00000273853|CENPC	ENST00000513216.5_3_4:68338325-68358532:-|nuORF	ENST00000513216.5_3_4:68338325-68358532:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_A02_01	1	485.9129516482353	3	485.912407	1454.71539	1.1695	0.0005683	-0.089843	-4.3656E-05	1.0797	0.00052464	485.9125473671198	27.335	0.81163	27.335	27.107	27.919	0					112	26	6	0	0	0	0.91757	1	11418	11418		8.7518	2.5174	1	78638000			44009	3104	21603	21694	50900	50900					0.006223223040706216
YYNPHLLLNTL	11	Unmodified	_YYNPHLLLNTL_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	680.8674804568291	2	680.86662	1359.71869	2.6058	0.0017742	-0.71473	-0.00048664	1.8911	0.0012876	680.866099205244	62.443	0.39744	63.856	63.648	64.045	1.4134					37	12	4	0	0	0	0.0017835	2	26212	26162;26212		155.95	96.585	1	9007300			44010	5178	21604	21695	50901;50902	50902					0.05321617148729274
YYNPHLLLNTL	11	Unmodified	_YYNPHLLLNTL_					0	0	0		ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	ENSG00000205339|ENST00000379719|IPO7	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	680.8683349490166	2	680.86662	1359.71869	2.3239	0.0015823	0.041803	2.8462E-05	2.3657	0.0016107	680.866546925188	61.865	0.37344	63.822	63.625	63.999	1.9571					29	11	3	0	0	0	0.0015433	2	25975	25926;25975		159.1	105.7	1	5844400			44011	5178	21604	21695	50903;50904	50904					0.05321617148729274
YYNQEWTLW	9	Unmodified	_YYNQEWTLW_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	651.7930786013603	2	651.793121	1301.57169	1.3088	0.00085308	-3.159	-0.002059	-1.8502	-0.0012059	651.7916849204856	77.305	0.25237	79.057	78.915	79.167	1.7514					11	7	2	0	0	0	0.5697	1	32418	32418		12.532	7.2347	1	617900			44012	2474	21605	21696	50905	50905					-0.0670347973623393
YYNQEWTLW	9	Unmodified	_YYNQEWTLW_					0	0	0		ENSG00000130985|ENST00000335972|UBA1;nc|ENSG00000130985|P22314-2|UBA1	ENSG00000130985|ENST00000335972|UBA1	ENSG00000130985|ENST00000335972|UBA1	MULTI-MATCH	GG20161007_CRH_Patient100_W632_01	3		2	651.793121	1301.57169	2.1789	0.0014202	-3.6283	-0.0023649	-1.4494	-0.00094468	652.2898457236953	77.766	0.27912	79.047	78.95	79.229	1.2809	-0.0051897	-0.00048438	NaN	12.532	14	8	2	NaN	NaN	NaN	NaN	0				NaN	NaN	0	704210			44013	2474	21605	21696							-0.0670347973623393
YYNSHDSLSL	10	Unmodified	_YYNSHDSLSL_					0	0	0		nc|ENSG00000134242|Q9Y2R2-6|PTPN22;nc|ENSG00000134242|Q9Y2R2-2|PTPN22;ENST00000484147.5_1_1:114375712-114414257:-|nuORF;nc|ENSG00000134242|Q9Y2R2-3|PTPN22;nc|ENSG00000134242|Q9Y2R2-4|PTPN22;nc|ENSG00000134242|Q9Y2R2|PTPN22;ENSG00000134242|ENST00000359785|PTPN22	nc|ENSG00000134242|Q9Y2R2-6|PTPN22	nc|ENSG00000134242|Q9Y2R2-6|PTPN22	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	599.7745239138603	2	599.772385	1197.53022	2.9871	0.0017916	-0.78251	-0.00046933	2.2046	0.0013223	599.7725506560926	62.848	0.48754	64.262	64.045	64.533	1.4134					61	15	6	0	0	0	0.5476	1	26404	26404		25.399	2.2509	1	15001000			44014	2600	21606	21697	50906	50906					-0.06064660495553653
YYNSIINVL	9	Unmodified	_YYNSIINVL_					0	0	0			REV__ENSG00000154265|ENST00000392676|ABCA5	REV__ENSG00000154265|ENST00000392676|ABCA5	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	549.7999755740166	2	549.795132	1097.57571	2.5486	0.0014012	-0.97567	-0.00053642	1.573	0.00086482	549.7972263795366	63.208	0.37786	64.621	64.407	64.785	1.4134					23	11	4	0	0	0	0.49082	1	26502	26502		15.847	2.3393	1	2699900	+		44015	10469	21607	21698	50907	50907					0.030826097574845335
YYPEYKLLF	9	Unmodified	_YYPEYKLLF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	618.3212768435478	2	618.320983	1234.62741	2.1107	0.0013051	-3.9647	-0.0024515	-1.854	-0.0011464	618.316479703364	65.737	0.94261	67.136	66.849	67.792	1.3989					65	30	4	0	0	0	0.098163	1	27567	27567		49.933	30.676	1	8309300			44016	3540	21608	21699	50908	50908					0.019483534513710765
YYPEYKLLF	9	Unmodified	_YYPEYKLLF_					0	0	0		ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	ENSG00000159720|ENST00000290949|ATP6V0D1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	618.3204833865166	2	618.320983	1234.62741	1.5206	0.00094023	-3.768	-0.0023298	-2.2474	-0.0013896	618.3165177588058	65.262	0.95309	67.171	66.938	67.891	1.9085					57	30	4	0	0	0	0.13873	2	27392	27341;27392		39.957	17.221	1	6813500			44017	3540	21608	21699	50909;50910	50910					0.019483534513710765
YYPNPPLVL	9	Unmodified	_YYPNPPLVL_					0	0	0		nc|ENSG00000178425|Q5TFE4-2|NT5DC1;ENSG00000178425|ENST00000319550|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	538.2971679568291	2	538.294768	1074.57498	2.1493	0.0011569	0.69189	0.00037244	2.8412	0.0015294	538.2950553934421	69.222	0.91165	70.588	69.997	70.908	1.3657					89	29	4	0	0	0	0.01705	3	28982	28982;29033;29084		101.72	61.273	1	16380000			44018	4484	21609	21700	50911;50912;50913	50911					0.040678151084193814
YYPNPPLVL	9	Unmodified	_YYPNPPLVL_					0	0	0		nc|ENSG00000178425|Q5TFE4-2|NT5DC1;ENSG00000178425|ENST00000319550|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1075.583178699017	1	1075.58226	1074.57498	2.1878	0.0023532	-0.99755	-0.001073	1.1903	0.0012802	1075.580526469787	69.222	0.40604	70.587	70.381	70.787	1.3657					23	13	2	0	0	0	0.046276	2	29077	29023;29077		70.716	12.896	1	2309700			44019	4484	21609	21700	50914;50915	50915					0.040678151084193814
YYPNPPLVL	9	Unmodified	_YYPNPPLVL_					0	0	0		nc|ENSG00000178425|Q5TFE4-2|NT5DC1;ENSG00000178425|ENST00000319550|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2962524294853	2	538.294768	1074.57498	1.7287	0.00093054	0.68174	0.00036698	2.4104	0.0012975	538.2949484485143	68.684	0.73604	70.537	70.12	70.856	1.853					75	23	4	0	0	0	0.01705	4	28770	28722;28770;28821;28872		101.72	59.627	1	18916000			44020	4484	21609	21700	50916;50917;50918;50919	50917					0.040678151084193814
YYPNPPLVL	9	Unmodified	_YYPNPPLVL_					0	0	0		nc|ENSG00000178425|Q5TFE4-2|NT5DC1;ENSG00000178425|ENST00000319550|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	nc|ENSG00000178425|Q5TFE4-2|NT5DC1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1075.583300769329	1	1075.58226	1074.57498	1.8687	0.00201	-2.3317	-0.002508	-0.46302	-0.00049801	1075.5817852463551	68.72	0.33144	70.573	70.378	70.709	1.853					15	10	2	0	0	0	0.12174	2	28839	28764;28839		42.095	13.608	1	2191200			44021	4484	21609	21700	50920;50921	50921					0.040678151084193814
YYPRVEYGF	9	Unmodified	_YYPRVEYGF_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B;ENST00000468936.5_1_6:31999682-32002424:+|nuORF;ENST00000468237.5_1_6:32001530-32003051:+|nuORF	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	597.2868530154228	2	597.284931	1192.55531	2.3055	0.001377	0.094928	5.6699E-05	2.4004	0.0014337	597.2848431255758	44.132	0.24984	45.486	45.315	45.565	1.3536					12	7	2	0	0	0	0.35391	1	18487	18487		22.736	9.6938	1	946570			44022	5283	21610	21701	50922	50922					-0.033265609023374054
YYPRVEYGF	9	Unmodified	_YYPRVEYGF_					0	0	0		nc|ENSG00000244731|P0C0L4-2|C4A;ENSG00000244731|ENST00000428956|C4A;ENSG00000224389|ENST00000435363|C4B;ENST00000468936.5_1_6:31999682-32002424:+|nuORF;ENST00000468237.5_1_6:32001530-32003051:+|nuORF	nc|ENSG00000244731|P0C0L4-2|C4A	nc|ENSG00000244731|P0C0L4-2|C4A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	597.2860595583916	2	597.284931	1192.55531	2.124	0.0012686	0.25549	0.0001526	2.3795	0.0014212	597.2852121615629	43.441	0.26191	45.384	45.285	45.546	1.9438					13	8	2	0	0	0	0.35391	1	18213	18213		22.736	6.8891	1	744090			44023	5283	21610	21701	50923	50923					-0.033265609023374054
YYPWELAI	8	Unmodified	_YYPWELAI_					0	0	0		ENSG00000121716|ENST00000609309|PILRB	ENSG00000121716|ENST00000609309|PILRB	ENSG00000121716|ENST00000609309|PILRB	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	527.7673828005791	2	527.765843	1053.51713	0.64145	0.00033854	0.72238	0.00038125	1.3638	0.00071978	527.7661559535616	32.016	0.33224	33.297	33.11	33.442	1.2813					29	11	3	0	0	0	0.66111	1	13380	13380		34.187	3.5508	1	3466300			44024	2137	21611	21702	50924	50924					-0.007484468170105174
YYQAYQGQGF	10	Unmodified	_YYQAYQGQGF_					0	0	0			REV__ENST00000496494.5_1_8:72111577-72234167:-|nuORF	REV__ENST00000496494.5_1_8:72111577-72234167:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	612.7711059451103	2	612.769645	1223.52474	1.322	0.00081008	2.3889	0.0014638	3.7109	0.0022739	612.7709262552994	48.46	0.68064	49.848	49.521	50.202	1.388					51	21	3	0	0	0	0.84024	1	20398	20398		7.9102	3.5809	1	11248000	+		44025	9133	21612	21703	50925	50925					-0.07808339287385024
YYQHIVTTL	9	Unmodified	_YYQHIVTTL_					0	0	0		nc|ENSG00000116005|Q9UHG3-2|PCYOX1;ENSG00000116005|ENST00000433351|PCYOX1	nc|ENSG00000116005|Q9UHG3-2|PCYOX1	nc|ENSG00000116005|Q9UHG3-2|PCYOX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	569.3018066287041	2	569.300581	1136.58661	0.29371	0.00016721	1.0075	0.00057357	1.3012	0.00074078	569.3011539526138	36.144	0.29273	37.42	37.248	37.54	1.2762					34	16	3	0	0	0	0.13873	2	15186	15147;15186		39.957	14.558	1	2678100			44026	1944	21613	21704	50926;50927	50927					0.023780121317713565
YYQHIVTTL	9	Unmodified	_YYQHIVTTL_					0	0	0		nc|ENSG00000116005|Q9UHG3-2|PCYOX1;ENSG00000116005|ENST00000433351|PCYOX1	nc|ENSG00000116005|Q9UHG3-2|PCYOX1	nc|ENSG00000116005|Q9UHG3-2|PCYOX1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	569.3010742068291	2	569.300581	1136.58661	0.81128	0.00046186	0.16015	9.1171E-05	0.97143	0.00055303	569.300362253644	35.588	0.1906	37.406	37.311	37.502	1.8176					19	10	3	0	0	0	0.066815	1	14925	14925		61.357	26.956	1	2243600			44027	1944	21613	21704	50928	50928					0.023780121317713565
YYQNYFEKL	9	Unmodified	_YYQNYFEKL_					0	0	0		nc|ENSG00000166889|Q86TB9-2|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1;ENSG00000166889|ENST00000300146|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	634.3041259646416	2	634.303321	1266.59209	2.0081	0.0012737	0.55084	0.0003494	2.5589	0.0016231	634.3038360429385	47.308	0.3856	48.69	48.504	48.89	1.3825					26	11	3	0	0	0	0.046715	2	19796	19796;19851		70.332	54.183	1	2212700			44028	3931	21614	21705	50929;50930	50929					-0.030543090764240333
YYQNYFEKL	9	Unmodified	_YYQNYFEKL_					0	0	0		nc|ENSG00000166889|Q86TB9-2|PATL1;nc|ENSG00000166889|Q86TB9-4|PATL1;ENSG00000166889|ENST00000300146|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	nc|ENSG00000166889|Q86TB9-2|PATL1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	634.3043701052666	2	634.303321	1266.59209	1.6423	0.0010417	0.17965	0.00011395	1.822	0.0011557	634.303366644286	46.873	0.37636	48.849	48.622	48.999	1.976					29	11	3	0	0	0	0.046715	2	19642	19593;19642		70.332	43.448	1	1792400			44029	3931	21614	21705	50931;50932	50932					-0.030543090764240333
YYRPRFFLL	9	Unmodified	_YYRPRFFLL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	425.5739013552666	3	425.572998	1273.69716	2.6903	0.0011449	0.24705	0.00010514	2.9374	0.0012501	425.5729480190117	60.094	0.79019	61.513	61.298	62.089	1.4196					53	25	3	0	0	0	0.33297	2	25214	25214;25279		23.79	15.634	1	1863300			44030	2463	21615	21706	50933;50934	50933					0.07126276910662455
YYRPRFFLL	9	Unmodified	_YYRPRFFLL_					0	0	0		nc|ENSG00000130816|P26358-3|DNMT1;nc|ENSG00000130816|P26358|DNMT1;ENSG00000130816|ENST00000359526|DNMT1;ENST00000586588.5_1_19:10244345-10254710:-|nuORF	nc|ENSG00000130816|P26358-3|DNMT1	nc|ENSG00000130816|P26358-3|DNMT1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	425.5736266970634	3	425.572998	1273.69716	2.8659	0.0012196	-1.1302	-0.00048098	1.7357	0.00073866	425.5724346581132	59.525	0.82499	61.494	61.315	62.14	1.969					52	26	3	0	0	0	0.42097	3	25006	25006;25057;25121		19.362	13.579	1	1907100			44031	2463	21615	21706	50935;50936;50937	50935					0.07126276910662455
YYRTTTSGS	9	Unmodified	_YYRTTTSGS_					0	0	0			REV__ENST00000589977.5_1_17:74729214-74729274:+|nuORF	REV__ENST00000589977.5_1_17:74729214-74729274:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	518.2413818240166	2	518.240721	1034.46689	2.8475	0.0014757	-2.2405	-0.0011611	0.60701	0.00031458	518.2397681704961	75.054	2.7506	76.836	76.195	78.945	1.7817					227	87	6	0	0	0	0.59568	3	31371	31371;31420;31472		11.495	4.2055	1	7905300	+		44032	14060	21616	21707	50938;50939;50940	50938					-0.04896601212817586
YYRTVNAS	8	Unmodified	_YYRTVNAS_					0	0	0			REV__nc|ENSG00000105825|P48307-2|TFPI2	REV__nc|ENSG00000105825|P48307-2|TFPI2	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1627990603447	3	325.162775	972.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	85.46	1	85.46	84.96	85.96	0								0	0	0	1.0178	1	35606	35606		0.40072	0	1		+		44033	9190	21617	21708	50941	50941					-0.020839761419892966
YYRTVNAS	8	Unmodified	_YYRTVNAS_					0	0	0			REV__nc|ENSG00000105825|P48307-2|TFPI2	REV__nc|ENSG00000105825|P48307-2|TFPI2	MSMS	GG20161007_CRH_Patient100_A02_01	1	325.1635619997978	3	325.162775	972.466495	NaN	NaN	NaN	NaN	NaN	NaN	NaN	87.679	1	87.679	87.179	88.179	0								0	0	0	1.0178	1	36645	36645		0.40072	0	1		+		44034	9190	21617	21708	50942	50942					-0.020839761419892966
YYSERCGLW	9	Unmodified	_YYSERCGLW_					0	0	0			REV__ENST00000261192.11_1_12:24969409-24969481:-|nuORF	REV__ENST00000261192.11_1_12:24969409-24969481:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_01	3	589.3447143435478	2	588.760766	1175.50698	3.4251	0.0020165	1.185	0.00069767	4.6101	0.0027142	588.7622016794032	74.272	0.27698	75.59	75.374	75.651	1.318					13	8	2	0	0	0	0.11568	1	31102	31102		10.824	2.9138	1	694370	+		44035	12183	21618	21709	50943	50943					-0.07375377813878004
YYSERCGLW	9	Unmodified	_YYSERCGLW_					0	0	0			REV__ENST00000261192.11_1_12:24969409-24969481:-|nuORF	REV__ENST00000261192.11_1_12:24969409-24969481:-|nuORF	MULTI-SECPEP	GG20161007_CRH_Patient100_W632_02	4	589.3430663943291	2	588.760766	1175.50698	2.9225	0.0017207	2.4243	0.0014273	5.3468	0.003148	588.7626055888021	73.724	0.30999	75.52	75.377	75.687	1.7962					15	9	2	0	0	0	0.11568	1	30948	30948		10.824	1.4765	1	860570	+		44036	12183	21618	21709	50944	50944					-0.07375377813878004
YYSPGYSD	8	Unmodified	_YYSPGYSD_					0	0	0		nc|ENSG00000077327|O75602-4|SPAG6;nc|ENSG00000077327|O75602-5|SPAG6;ENSG00000077327|ENST00000376624|SPAG6;nc|ENSG00000077327|O75602-3|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	nc|ENSG00000077327|O75602-4|SPAG6	MSMS	GG20161007_CRH_Patient100_W632_02	4	476.1934081912041	2	476.190165	950.365778	NaN	NaN	NaN	NaN	NaN	NaN	NaN	103.78	1	103.95	103.45	104.45	0.1731								0	0	0	1.0178	1	43780	43780		5.2307	2.6532	1				44037	961	21619	21710	50945	50945					-0.11139052915507364
YYSPHGHILVL	11	Unmodified	_YYSPHGHILVL_					0	0	0		nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;ENSG00000144895|ENST00000460851|EIF2A	nc|ENSG00000144895|Q9BY44-2|EIF2A	nc|ENSG00000144895|Q9BY44-2|EIF2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	433.5689269900322	3	433.567912	1297.68191	2.1473	0.00093099	-0.20938	-9.0781E-05	1.9379	0.00084021	433.56773166113334	38.873	0.34509	40.169	39.974	40.319	1.2961					25	10	3	0	0	0	0.71484	2	16294	16294;16342		17.863	10.826	1	4035400			44038	3098	21620	21711	50946;50947	50946					0.04497365322799851
YYSPHGHILVL	11	Unmodified	_YYSPHGHILVL_					0	0	0		nc|ENSG00000144895|Q9BY44-2|EIF2A;nc|ENSG00000144895|Q9BY44-4|EIF2A;nc|ENSG00000144895|Q9BY44-3|EIF2A;ENSG00000144895|ENST00000460851|EIF2A	nc|ENSG00000144895|Q9BY44-2|EIF2A	nc|ENSG00000144895|Q9BY44-2|EIF2A	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	433.9023925662041	3	433.567912	1297.68191	1.0971	0.00047569	1.011	0.00043835	2.1082	0.00091404	433.56829388112175	38.247	0.43872	40.067	39.848	40.287	1.8202					30	13	4	0	0	0	0.82685	2	16022	16022;16086		14.218	8.8155	1	3696000			44039	3098	21620	21711	50948;50949	50948					0.04497365322799851
YYTDASPS	8	Unmodified	_YYTDASPS_					0	0	0		ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	ENSG00000158201|ENST00000289119|ABHD3	MULTI-MSMS	GG20161007_CRH_Patient100_A02_02	2	903.3782836794853	1	903.373054	902.365778	2.6573	0.0024005	3.5419	0.0031997	6.1992	0.0056002	903.3795933415864	87.372	0.21302	87.615	87.527	87.74	0.24387					11	6	2	0	0	0	0.87106	1	36641	36641		14.582	4.3983	1	812330			44040	3493	21621	21712	50950	50950					-0.08931052915511373
YYTDFLITL	9	Unmodified	_YYTDFLITL_					0	0	0		ENST00000462731.1_1_7:94229956-94232691:-|nuORF;ENSG00000127990|ENST00000648936|SGCE;nc|ENSG00000127990|O43556-3|SGCE;nc|ENSG00000127990|O43556-4|SGCE	ENST00000462731.1_1_7:94229956-94232691:-|nuORF	ENST00000462731.1_1_7:94229956-94232691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	574.7994872927666	2	574.79734	1147.58013	4.1165	0.0023661	-0.11907	-6.8442E-05	3.9974	0.0022977	574.7972702604025	92.488	0.32809	93.424	93.244	93.572	0.93623					16	9	2	0	0	0	0.1735	1	38926	38926		36.044	21.206	1	1027500			44041	2353	21622	21713	50951	50951					0.01224074180390744
YYTDFLITL	9	Unmodified	_YYTDFLITL_					0	0	0		ENST00000462731.1_1_7:94229956-94232691:-|nuORF;ENSG00000127990|ENST00000648936|SGCE;nc|ENSG00000127990|O43556-3|SGCE;nc|ENSG00000127990|O43556-4|SGCE	ENST00000462731.1_1_7:94229956-94232691:-|nuORF	ENST00000462731.1_1_7:94229956-94232691:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	574.7993652224541	2	574.79734	1147.58013	3.2874	0.0018896	0.10805	6.2108E-05	3.3955	0.0019517	574.7967919968629	91.95	0.45085	93.277	93.118	93.568	1.3269					25	13	3	0	0	0	0.22519	2	38719	38719;38770		30.225	17.182	1	911970			44042	2353	21622	21713	50952;50953	50952					0.01224074180390744
YYTDIMHTL	9	Unmodified	_YYTDIMHTL_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF;TUBGCP6-PLXNB2|1|fusion;ENSG00000196576|ENST00000359337|PLXNB2	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	578.7706786990166	2	578.7708	1155.52705	0.82168	0.00047556	-0.75053	-0.00043439	0.071143	4.1175E-05	578.7704390382634	52.58	0.37582	53.976	53.804	54.18	1.3966					33	11	4	0	0	0	0.00025648	2	22030	21979;22030		139.54	75.308	1	8906900			44043	4948	21623	21714	50954;50955	50955					-0.044496268739294464
YYTDIMHTL	9	Unmodified	_YYTDIMHTL_					0	0	0		ENST00000479701.5_1_22:50714135-50720918:-|nuORF;TUBGCP6-PLXNB2|1|fusion;ENSG00000196576|ENST00000359337|PLXNB2	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	ENST00000479701.5_1_22:50714135-50720918:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	578.7716552615166	2	578.7708	1155.52705	1.3794	0.00079838	-0.58762	-0.0003401	0.79183	0.00045829	578.7706221313871	52.048	0.4013	54.021	53.799	54.2	1.9722					35	12	4	0	0	0	0.0075027	2	21822	21771;21822		112.59	57.82	1	7892700			44044	4948	21623	21714	50956;50957	50957					-0.044496268739294464
YYTEFPTVL	9	Unmodified	_YYTEFPTVL_					0	0	0		HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1;HAT1|p.M373Tfs*18|1|0.32|ENSG00000128708|chr2:171983207-171983223|AGATGAGAAAATGTCTC/-|frameshift_variant;ENSG00000128708|ENST00000264108|HAT1	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	566.7837402224541	2	566.78169	1131.54883	2.3188	0.0013143	1.4938	0.00084664	3.8126	0.0021609	566.7821895692845	72.109	0.37407	73.451	73.31	73.684	1.3415					21	11	3	0	0	0	0.087207	1	30262	30262		53.576	39.67	1	1588300			44045	2381	21624	21715	50958	50958					-0.011684988537126628
YYTEFPTVL	9	Unmodified	_YYTEFPTVL_					0	0	0		HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1;HAT1|p.M373Tfs*18|1|0.32|ENSG00000128708|chr2:171983207-171983223|AGATGAGAAAATGTCTC/-|frameshift_variant;ENSG00000128708|ENST00000264108|HAT1	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1132.560717761517	1	1132.5561	1131.54883	1.9076	0.0021605	0.35983	0.00040753	2.2674	0.002568	1132.5572406666079	72.159	0.25046	73.488	73.33	73.58	1.3298					12	7	2	0	0	0	0.051699	1	30274	30274		67.344	38.262	1	1073800			44046	2381	21624	21715	50959	50959					-0.011684988537126628
YYTEFPTVL	9	Unmodified	_YYTEFPTVL_					0	0	0		HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1;HAT1|p.M373Tfs*18|1|0.32|ENSG00000128708|chr2:171983207-171983223|AGATGAGAAAATGTCTC/-|frameshift_variant;ENSG00000128708|ENST00000264108|HAT1	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	566.7826415896416	2	566.78169	1131.54883	2.1977	0.0012456	0.87777	0.0004975	3.0754	0.0017431	566.7819377782029	71.699	0.37939	73.523	73.286	73.665	1.824					21	11	3	0	0	0	0.061246	2	30083	30037;30083		63.563	32.926	1	2222300			44047	2381	21624	21715	50960;50961	50961					-0.011684988537126628
YYTEFPTVL	9	Unmodified	_YYTEFPTVL_					0	0	0		HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant;ENST00000457761.6_1_2:172821936-172844354:+|nuORF;nc|ENSG00000128708|O14929-2|HAT1;HAT1|p.M373Tfs*18|1|0.32|ENSG00000128708|chr2:171983207-171983223|AGATGAGAAAATGTCTC/-|frameshift_variant;ENSG00000128708|ENST00000264108|HAT1	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	HAT1|p.D272H|1|0.18|ENSG00000128708|chr2:171966940-171966940|G/C|missense_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	1132.557421863079	1	1132.5561	1131.54883	2.0373	0.0023074	1.8243	0.0020661	3.8616	0.0043735	1132.5567744459656	71.642	0.31559	73.466	73.349	73.665	1.824					16	9	2	0	0	0	0.069258	1	30078	30078		60.39	38.643	1	910300			44048	2381	21624	21715	50962	50962					-0.011684988537126628
YYTKGFALL	9	Unmodified	_YYTKGFALL_					0	0	0		nc|ENSG00000152952|O00469-3|PLOD2;nc|ENSG00000152952|O00469|PLOD2;ENSG00000152952|ENST00000282903|PLOD2	nc|ENSG00000152952|O00469-3|PLOD2	nc|ENSG00000152952|O00469-3|PLOD2	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	538.2945434451103	2	538.294768	1074.57498	1.1507	0.00061943	-1.736	-0.00093447	-0.58525	-0.00031504	538.2930527330739	53.704	0.15672	55.674	55.595	55.752	1.9697					11	4	3	0	0	0	0.086433	1	22519	22519		53.833	17.706	1	2184100			44049	3343	21625	21716	50963	50963					0.04067815108442119
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_A02_02	2	327.1408874392509	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	54.7	1	55.021	54.521	55.521	0.32088								0	0	0	1.0178	1	22906	22906		0.45834	0	1		+	+	44050	8375	21626	21717	50964	50964					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1420165896416	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.789	1	76.096	75.596	76.596	1.3063								0	0	0	1.0178	1	31390	31390		0.45834	0	1		+	+	44051	8375	21626	21717	50965	50965					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1420471072197	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	74.914	1	76.221	75.721	76.721	1.3063								0	0	0	1.0178	1	31442	31442		0.45834	0	1		+	+	44052	8375	21626	21717	50966	50966					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1422912478447	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.036	1	76.342	75.842	76.842	1.3063								0	0	0	1.0178	1	31491	31491		0.45834	0	1		+	+	44053	8375	21626	21717	50967	50967					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1418334841728	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.162	1	76.468	75.968	76.968	1.3063								0	0	0	1.0178	1	31546	31546		0.45834	0	1		+	+	44054	8375	21626	21717	50968	50968					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1418640017509	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.279	1	76.586	76.086	77.086	1.3063								0	0	0	1.0178	1	31596	31596		0.45834	0	1		+	+	44055	8375	21626	21717	50969	50969					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1421386599541	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	75.463	1	76.769	76.269	77.269	1.3063								0	0	0	1.0178	1	31674	31674		0.45834	0	1		+	+	44056	8375	21626	21717	50970	50970					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1421996951103	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.406	1	77.7	77.2	78.2	1.2938								0	0	0	1.0178	1	32077	32077		0.45834	0	1		+	+	44057	8375	21626	21717	50971	50971					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1420776247978	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.523	1	77.817	77.317	78.317	1.2938								0	0	0	1.0178	1	32125	32125		0.45834	0	1		+	+	44058	8375	21626	21717	50972	50972					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1418029665947	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.626	1	77.92	77.42	78.42	1.2938								0	0	0	1.0178	1	32167	32167		0.45834	0	1		+	+	44059	8375	21626	21717	50973	50973					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1419555544853	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.875	1	78.169	77.669	78.669	1.2938								0	0	0	1.0178	1	32272	32272		0.45834	0	1		+	+	44060	8375	21626	21717	50974	50974					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1418945193291	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	76.996	1	78.277	77.777	78.777	1.2809								0	0	0	1.0178	1	32322	32322		0.45834	0	1		+	+	44061	8375	21626	21717	50975	50975					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1420165896416	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.295	1	78.576	78.076	79.076	1.2809								0	0	0	1.0178	1	32443	32443		0.45834	0	1		+	+	44062	8375	21626	21717	50976	50976					-0.08827874219650766
YYTMGHAH	8	Unmodified	_YYTMGHAH_					0	0	0			REV__CON__ENSEMBL:ENSBTAP00000031900	REV__CON__ENSEMBL:ENSBTAP00000031900	MSMS	GG20161007_CRH_Patient100_W632_01	3	327.1418945193291	3	327.141205	978.401786	NaN	NaN	NaN	NaN	NaN	NaN	NaN	77.413	1	78.694	78.194	79.194	1.2809								0	0	0	1.0178	1	32492	32492		0.45834	0	1		+	+	44063	8375	21626	21717	50977	50977					-0.08827874219650766
YYTPITPHL	9	Unmodified	_YYTPITPHL_					0	0	0		nc|ENSG00000119314|O95758-1|PTBP3;ENSG00000119314|ENST00000374257|PTBP3;nc|ENSG00000119314|O95758-2|PTBP3;nc|ENSG00000119314|O95758|PTBP3;nc|ENSG00000119314|O95758-5|PTBP3;nc|ENSG00000119314|O95758-4|PTBP3;nc|ENSG00000119314|O95758-7|PTBP3	nc|ENSG00000119314|O95758-1|PTBP3	nc|ENSG00000119314|O95758-1|PTBP3	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	552.7880737185478	2	552.78985	1103.56515	1.4821	0.00081926	-3.5725	-0.0019748	-2.0904	-0.0011556	552.7885015560818	46.078	0.31498	47.453	47.271	47.586	1.3751					15	9	2	0	0	0	0.033521	2	19291	19291;19346		81.864	61.41	1	2620400			44064	2063	21627	21718	50978;50979	50978					0.01750627103047009
YYTQCQHCPS	10	Unmodified	_YYTQCQHCPS_					0	0	0			REV__sp|Q6SVZ5|US11_HCMVMMembraneglycoproteinUS11OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US11PE=2SV=1	REV__sp|Q6SVZ5|US11_HCMVMMembraneglycoproteinUS11OS=Humancytomegalovirus(strainMerlin)OX=295027GN=US11PE=2SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	410.4960510134697	3	410.495319	1228.46413	3.0441	0.0012496	-0.67337	-0.00027642	2.3707	0.00097316	410.49497941528824	62.264	0.35776	64.221	64.061	64.419	1.9571					22	11	2	0	0	0	0.85124	1	26133	26133		6.1918	2.6048	1	4360100	+		44065	14650	21628	21719	50980	50980					-0.14096515933624687
YYVDFFKTL	9	Unmodified	_YYVDFFKTL_					0	0	0		nc|ENSG00000132406|Q5BJH2-2|TMEM128;ENSG00000132406|ENST00000382753|TMEM128	nc|ENSG00000132406|Q5BJH2-2|TMEM128	nc|ENSG00000132406|Q5BJH2-2|TMEM128	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	598.3072997927666	2	598.305332	1194.59611	3.5357	0.0021154	0.50308	0.000301	4.0388	0.0024164	598.3056017614847	72.99	0.62672	74.319	73.943	74.569	1.3298					54	19	4	0	0	0	0.046032	2	30631	30585;30631		86.332	61.341	1	5235200			44066	2530	21629	21720	50981;50982	50982					0.006597804172997712
YYVDFFKTL	9	Unmodified	_YYVDFFKTL_					0	0	0		nc|ENSG00000132406|Q5BJH2-2|TMEM128;ENSG00000132406|ENST00000382753|TMEM128	nc|ENSG00000132406|Q5BJH2-2|TMEM128	nc|ENSG00000132406|Q5BJH2-2|TMEM128	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	598.3076660037041	2	598.305332	1194.59611	2.7444	0.001642	0.46464	0.000278	3.209	0.00192	598.3057896911474	72.468	0.43729	74.278	74.011	74.448	1.8101					39	13	4	0	0	0	0.046032	2	30419	30377;30419		86.332	55.064	1	6867200			44067	2530	21629	21720	50983;50984	50984					0.006597804172997712
YYVGGEIVTI	10	Unmodified	_YYVGGEIVTI_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	557.2958251833916	2	557.294965	1112.57538	2.4014	0.0013383	-3.5493	-0.001978	-1.1479	-0.00063971	557.293319720893	64.042	0.53855	65.449	64.958	65.497	1.4071					38	16	4	0	0	0	0.25611	1	26810	26810		42.095	18.946	1	11017000			44068	367	21630	21721	50985	50985					0.023591900376231933
YYVGGEIVTI	10	Unmodified	_YYVGGEIVTI_					0	0	0		COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant;nc|ENSG00000184432|P35606-2|COPB2;ENSG00000184432|ENST00000333188|COPB2	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	COPB2|p.T792Rfs*3|1|0.4|ENSG00000184432|chr3:139359106-139359107|TG/-|frameshift_variant	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	1113.586230456829	1	1113.58265	1112.57538	2.1016	0.0023403	1.2186	0.001357	3.3202	0.0036973	1113.583257411844	63.997	0.35171	65.405	65.24	65.591	1.4071					25	10	3	0	0	0	0.13671	1	26824	26824		57.471	21.344	1	2188400			44069	367	21630	21721	50986	50986					0.023591900376231933
YYVLGIWYWFD	11	Unmodified	_YYVLGIWYWFD_					0	0	0		ENSG00000109163|ENST00000226413|GNRHR	ENSG00000109163|ENST00000226413|GNRHR	ENSG00000109163|ENST00000226413|GNRHR	MSMS	GG20161007_CRH_Patient100_W632_02	4	762.6871826052666	2	762.863546	1523.71254	NaN	NaN	NaN	NaN	NaN	NaN	NaN	97.055	1	97.362	96.862	97.862	0.3062								0	0	0	0.63775	1	40825	40825		3.5965	0.60125	1				44070	1661	21631	21722	50987	50987					-0.0283690108283281
YYVRAVLHL	9	Unmodified	_YYVRAVLHL_					0	0	0		ENSG00000051523|ENST00000261623|CYBA;ENST00000566534.5_1_16:88713161-88717421:-|nuORF	ENSG00000051523|ENST00000261623|CYBA	ENSG00000051523|ENST00000261623|CYBA	MSMS	GG20161007_CRH_Patient100_W632_01	3	567.3312255740166	2	567.326934	1132.63931	NaN	NaN	NaN	NaN	NaN	NaN	NaN	41.466	1	42.791	42.291	43.291	1.3254								0	0	0	0.40883	1	17385	17385		7.9102	1.7044	1				44071	704	21632	21723	50988	50988					0.07830014985233902
YYVRAWVVF	9	Unmodified	_YYVRAWVVF_					0	0	0		ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	601.8218871951103	2	601.821484	1201.62842	2.798	0.0016839	0.11624	6.9957E-05	2.9142	0.0017538	601.8211854658078	70.007	1.1406	71.361	70.957	72.098	1.3536					81	35	3	0	0	0	0.10993	3	29414	29365;29414;29468		46.021	31.439	1	1586400			44072	1951	21633	21724	50989;50990;50991	50990					0.03566612610916309
YYVRAWVVF	9	Unmodified	_YYVRAWVVF_					0	0	0		ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	ENSG00000116133|ENST00000371269|DHCR24	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	601.8237792849541	2	601.821484	1201.62842	2.2233	0.001338	-0.2898	-0.00017441	1.9335	0.0011636	601.8206779989498	69.33	1.1692	71.183	70.887	72.056	1.853					77	36	3	0	0	0	0.10993	3	29103	29051;29103;29168		46.021	27.886	1	1599900			44073	1951	21633	21724	50992;50993;50994	50993					0.03566612610916309
YYVRILSTI	9	Unmodified	_YYVRILSTI_					0	0	0		ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4;ENSG00000013275|ENST00000157812|PSMC4;ENST00000601697.5_1_19:40477100-40486546:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	MSMS	GG20161007_CRH_Patient100_W632_01	3	564.3251830935478	2	564.326599	1126.63865	NaN	NaN	NaN	NaN	NaN	NaN	NaN	57.589	1	59.003	58.503	59.503	1.4145								0	0	0	2.8311E-07	1	24144	24144		122.18	54.835	1				44074	581	21634	21725	50995	50995					0.08039175545536636
YYVRILSTI	9	Unmodified	_YYVRILSTI_					0	0	0		ENST00000596386.1_1_19:40477100-40485896:+|nuORF;ENST00000593455.5_1_19:40477100-40486089:+|nuORF;nc|ENSG00000013275|P43686-2|PSMC4;ENSG00000013275|ENST00000157812|PSMC4;ENST00000601697.5_1_19:40477100-40486546:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	ENST00000596386.1_1_19:40477100-40485896:+|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	564.3279296755791	2	564.326599	1126.63865	0.68243	0.00038511	-0.70103	-0.00039561	-0.018603	-1.0498E-05	564.3259690729523	57.052	0.31211	59.02	58.814	59.126	1.9684					23	14	3	0	0	0	0.0080158	2	23948	23882;23948		110.67	43.331	1	8428400			44075	581	21634	21725	50996;50997	50997					0.08039175545536636
YYVRKKFLKLK	11	Unmodified	_YYVRKKFLKLK_					0	0	0			REV__tr|A0A7D6ZJ54|A0A7D6ZJ54_9CLOTRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=sigEPE=3SV=1	REV__tr|A0A7D6ZJ54|A0A7D6ZJ54_9CLOTRNApolymerasesigmafactorOS=ClostridiumintestinaleOX=36845GN=sigEPE=3SV=1	MSMS	GG20161007_CRH_Patient100_W632_02	4	743.4687377810478	2	743.468847	1484.92314	NaN	NaN	NaN	NaN	NaN	NaN	NaN	98.037	1	98.293	97.793	98.793	0.25636								0	0	0	0.63775	1	41247	41247		1.3295	0.9789	1		+		44076	15669	21635	21726	50998	50998					0.20007601029874422
YYVTDDDYL	9	Unmodified	_YYVTDDDYL_					0	0	0		tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	tr|A0A7D7A0Q9|A0A7D7A0Q9_9CLOTGlutamatesynthaselargesubunitOS=ClostridiumintestinaleOX=36845GN=gltBPE=3SV=1	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	583.7530395388603	2	583.748044	1165.48154	2.5528	0.0014902	3.8986	0.0022758	6.4514	0.003766	583.7511494582734	63.482	0.22449	65.426	65.312	65.537	1.9444					11	6	2	0	0	0	0.64949	1	26646	26646		9.3474	3.1417	1	1603100			44077	17227	21636	21727	50999	50999					-0.09458573855317809
YYWQTSAKW	9	Unmodified	_YYWQTSAKW_					0	0	0		ENST00000476329.1_1_1:35998986-36020116:-|nuORF;KIAA0319L-PSMB2|1|fusion;KIAA0319L-PSMB2|2|fusion;KIAA0319L|p.E866Vfs*20|1|0.09|ENSG00000142687|chr1:35444220-35444221|-/TAAACAACAAGAGCTAGAAGTGGGTTTAA|frameshift_variant;KIAA0319L|p.E866Dfs*33|1|0.09|ENSG00000142687|chr1:35444219-35444220|-/A|frameshift_variant;nc|ENSG00000142687|Q8IZA0-2|KIAA0319L;ENSG00000142687|ENST00000325722|KIAA0319L	ENST00000476329.1_1_1:35998986-36020116:-|nuORF	ENST00000476329.1_1_1:35998986-36020116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_01	3	616.7901489138603	2	616.790381	1231.56621	1.6465	0.0010155	-0.8036	-0.00049565	0.84285	0.00051986	617.2914672909436	45.771	0.34243	47.146	46.992	47.334	1.3751					16	10	2	0	0	0	0.10473	1	19177	19177		47.749	37.675	1	620590			44078	3004	21637	21728	51000	51000					-0.040311585280505824
YYWQTSAKW	9	Unmodified	_YYWQTSAKW_					0	0	0		ENST00000476329.1_1_1:35998986-36020116:-|nuORF;KIAA0319L-PSMB2|1|fusion;KIAA0319L-PSMB2|2|fusion;KIAA0319L|p.E866Vfs*20|1|0.09|ENSG00000142687|chr1:35444220-35444221|-/TAAACAACAAGAGCTAGAAGTGGGTTTAA|frameshift_variant;KIAA0319L|p.E866Dfs*33|1|0.09|ENSG00000142687|chr1:35444219-35444220|-/A|frameshift_variant;nc|ENSG00000142687|Q8IZA0-2|KIAA0319L;ENSG00000142687|ENST00000325722|KIAA0319L	ENST00000476329.1_1_1:35998986-36020116:-|nuORF	ENST00000476329.1_1_1:35998986-36020116:-|nuORF	MULTI-MSMS	GG20161007_CRH_Patient100_W632_02	4	616.7908813357353	2	616.790381	1231.56621	1.4445	0.00089094	-0.19973	-0.00012319	1.2447	0.00076775	616.7898275908815	45.295	0.31194	47.255	47.052	47.364	1.9596					17	9	2	0	0	0	0.1388	1	18974	18974		39.95	32.66	1	690740			44079	3004	21637	21728	51001	51001					-0.040311585280505824
YYWVIFRT	8	Unmodified	_YYWVIFRT_					0	0	0			REV__nc|ENSG00000068885|Q9P2H3-2|IFT80	REV__nc|ENSG00000068885|Q9P2H3-2|IFT80	MSMS	GG20161007_CRH_Patient100_W632_01	3	383.2036926150322	3	383.202682	1146.58622	NaN	NaN	NaN	NaN	NaN	NaN	NaN	108.41	1	108.57	108.07	109.07	0.15781								0	0	0	1.0178	1	46871	46871		0.45834	0	1		+		44080	8707	21638	21729	51002	51002					0.018786372025488163
YYYRDRDWRWV	11	Unmodified	_YYYRDRDWRWV_					0	0	0		ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	ENSG00000243811|ENST00000216099|APOBEC3D	MSMS	GG20161007_CRH_Patient100_W632_02	4	839.8609496951103	2	839.399681	1676.78481	NaN	NaN	NaN	NaN	NaN	NaN	NaN	112.83	1	112.98	112.48	113.48	0.14912								0	0	0	0.63775	1	48868	48868		1.4819	1.4819	1				44081	5357	21639	21730	51003	51003					-0.02651173956542152